RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TPX2 (Homo sapiens)

Ensembl gene IDs: ENSG00000088325

Ensembl transcript IDs: ENST00000300403.11, ENST00000340513.4

Found 328 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR GCA 90 bp CACGGTTCCCTGTTGTTATCAGCACCAGTAAGGAAAGAACGTGCCTTAACGGCAAGCCTGCTGCGTGGCTaGTGTGAGGCTCCCCATGAA +
Preference number: 2 (lower is better)
Translates to: HGSLLLSAPVRKERALTASLLRG*CEAPHE
Trigger: TTCATGGGGAGCCTCACAGCAGCCACGCAGCAGGCT...TGCCGTTAAGGCACGTTCTTTCCTTACTGGTGCTGATAACAACAGGGAACCGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
3UTR-3UTR GCA 90 bp GTTATCAGCACCAGTAAGGAAAGAACGTGCCTTAACGGCAGCCCCACCCAGAGCAATGGGTTCTCTCCATaGCCAATGACAAAGCAAGAC +
Preference number: 2 (lower is better)
Translates to: VISTSKERTCLNGSPTQSNGFSP*PMTKQD
Trigger: GTCTTGCTTTGTCATTGGGCATGGAGAGAACCCATT...GCTCTGGGTGGGGCTGCCGTTAAGGCACGTTCTTTCCTTACTGGTGCTGATAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
3UTR-3UTR CCA 90 bp CACGGTTCCCTGTTGTTATCAGCACCAGTAAGGAAAGAACGTGCCTTAACGGCAAAAAGTCTGGAGAAATaGGTTCTCTCCATGCCCAAT +
Preference number: 2 (lower is better)
Translates to: HGSLLLSAPVRKERALTAKSLEK*VLSMPN
Trigger: ATTGGGCATGGAGAGAACCCATTTCTCCAGACTTTT...TGCCGTTAAGGCACGTTCTTTCCTTACTGGTGCTGATAACAACAGGGAACCGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
3UTR-3UTR GCA 90 bp ACTACATGGAGTCTAATCGAGACATTCATGAGTTACATCTCATTATTAGCCTTAAAGAGCAGGTCCCATTaGCGGGCGGTATCCGCAGCT +
Preference number: 2 (lower is better)
Translates to: TTWSLIETFMSYISLLALKSRSH*RAVSAA
Trigger: AGCTGCGGATACCGCCCGGCAATGGGACCTGCTCTT...TAAGGCTAATAATGAGATGTAACTCATGAATGTCTCGATTAGACTCCATGTAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
3UTR-3UTR GCA 90 bp TGGTTTAAAGGAAGTAACTACATGGAGTCTAATCGAGACATTCATGAGTTACATAAGAGCAGGTCCCATTaGCGGGCGGTATCCGCAGCT +
Preference number: 2 (lower is better)
Translates to: WFKGSNYMESNRDIHELHKSRSH*RAVSAA
Trigger: AGCTGCGGATACCGCCCGGCAATGGGACCTGCTCTT...ATGTAACTCATGAATGTCTCGATTAGACTCCATGTAGTTACTTCCTTTAAACCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
3UTR-3UTR TCA 90 bp ACTACATGGAGTCTAATCGAGACATTCATGAGTTACATCTCATTATTAGCCTTATCTCTCCATGCCCAATaGCAAAGCAAGACGGTCCTA +
Preference number: 2 (lower is better)
Translates to: TTWSLIETFMSYISLLALSLHAQ*QSKTVL
Trigger: TAGGACCGTCTTGCTTTGTCATTGGGCATGGAGAGA...TAAGGCTAATAATGAGATGTAACTCATGAATGTCTCGATTAGACTCCATGTAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
3UTR-3UTR TCA 90 bp TTAAAGGAAGTAACTACATGGAGTCTAATCGAGACATTCATGAGTTACATCTCATCTCTCCATGCCCAATaGCAAAGCAAGACGGTCCTA +
Preference number: 2 (lower is better)
Translates to: LKEVTTWSLIETFMSYISSLHAQ*QSKTVL
Trigger: TAGGACCGTCTTGCTTTGTCATTGGGCATGGAGAGA...TGAGATGTAACTCATGAATGTCTCGATTAGACTCCATGTAGTTACTTCCTTTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
3UTR-3UTR CCA 90 bp TGGTTTAAAGGAAGTAACTACATGGAGTCTAATCGAGACATTCATGAGTTACATAAAAGTCTGGAGAAATaGGTTCTCTCCATGCCCAAT +
Preference number: 2 (lower is better)
Translates to: WFKGSNYMESNRDIHELHKSLEK*VLSMPN
Trigger: ATTGGGCATGGAGAGAACCCATTTCTCCAGACTTTT...ATGTAACTCATGAATGTCTCGATTAGACTCCATGTAGTTACTTCCTTTAAACCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
3UTR GCA 72 bp TTCCCTGTTGTTATCAGCACCAGTAAGGAAAGAACGTaGCTTAACGGCAGCCCCACCCAGAGCCTGCTGCGT +
Preference number: 3 (lower is better)
Translates to: FPVVISTSKERT*LNGSPTQSLLR
Trigger: ACGCAGCAGGCTCTGGGTGGGGCTGCCGTTAAGGCACGTTCTTTCCTTACTGGTGCTGATAACAACAGGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
3UTR CCA 72 bp CTTTCTCAGGCACGGGTAGGTAAAAGTCTGGAGAAATaGGTTCTCTCCATGCCCAATGACAAAGCAAGACGG +
Preference number: 3 (lower is better)
Translates to: LSQARVGKSLEK*VLSMPNDKARR
Trigger: CCGTCTTGCTTTGTCATTGGGCATGGAGAGAACCCATTTCTCCAGACTTTTACCTACCCGTGCCTGAGAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
3UTR-3UTR CAA 90 bp TCTAGTCAGAGTGAAGACCCATATAAAAGGCCGGCTGATGGTTTAAAGGAAGTAAAGACGGTCCTAGGTTaGAGGTTAAGAGCAGGTCCC +
Preference number: 3 (lower is better)
Translates to: SSQSEDPYKRPADGLKEVKTVLG*RLRAGP
Trigger: GGGACCTGCTCTTAACCTCAAACCTAGGACCGTCTT...TACTTCCTTTAAACCATCAGCCGGCCTTTTATATGGGTCTTCACTCTGACTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
3UTR-3UTR CAA 90 bp TACATGGAGTCTAATCGAGACATTCATGAGTTACATCTCATTATTAGCCTTAGTAAGACGGTCCTAGGTTaGAGGTTAAGAGCAGGTCCC +
Preference number: 3 (lower is better)
Translates to: YMESNRDIHELHLIISLSKTVLG*RLRAGP
Trigger: GGGACCTGCTCTTAACCTCAAACCTAGGACCGTCTT...ACTAAGGCTAATAATGAGATGTAACTCATGAATGTCTCGATTAGACTCCATGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
3UTR-3UTR CAA 90 bp TGGTTTAAAGGAAGTAACTACATGGAGTCTAATCGAGACATTCATGAGTTACATAACTGGAGTCCACAGTaGTCAAGTATGCTTTCTCAG +
Preference number: 3 (lower is better)
Translates to: WFKGSNYMESNRDIHELHNWSPQ*SSMLSQ
Trigger: CTGAGAAAGCATACTTGACAACTGTGGACTCCAGTT...ATGTAACTCATGAATGTCTCGATTAGACTCCATGTAGTTACTTCCTTTAAACCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR GCA 90 bp TTGAGGTTAAGAGCAGGTCCCATTGCCGGGCGGTATCCGCAGCTCACAGCTGAGGCCCCACCCAGAGCCTaGTGCGTGGCTGCTGTGAGG +
Preference number: 4 (lower is better)
Translates to: LRLRAGPIAGRYPQLTAEAPPRA*CVAAVR
Trigger: CCTCACAGCAGCCACGCAGCAGGCTCTGGGTGGGGC...CTCAGCTGTGAGCTGCGGATACCGCCCGGCAATGGGACCTGCTCTTAACCTCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR GCA 90 bp TTGAGGTTAAGAGCAGGTCCCATTGCCGGGCGGTATCCGCAGCTCACAGCTGAGAAGAGCAGGTCCCATTaGCGGGCGGTATCCGCAGCT +
Preference number: 4 (lower is better)
Translates to: LRLRAGPIAGRYPQLTAEKSRSH*RAVSAA
Trigger: AGCTGCGGATACCGCCCGGCAATGGGACCTGCTCTT...CTCAGCTGTGAGCTGCGGATACCGCCCGGCAATGGGACCTGCTCTTAACCTCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR TCA 90 bp TTGAGGTTAAGAGCAGGTCCCATTGCCGGGCGGTATCCGCAGCTCACAGCTGAGAGGGCTCCTGAGAGATaGCGGTGTTTGGACGAGCCT +
Preference number: 4 (lower is better)
Translates to: LRLRAGPIAGRYPQLTAERAPER*RCLDEP
Trigger: AGGCTCGTCCAAACACCGTCATCTCTCAGGAGCCCT...CTCAGCTGTGAGCTGCGGATACCGCCCGGCAATGGGACCTGCTCTTAACCTCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR GCA 90 bp TTGAGGTTAAGAGCAGGTCCCATTGCCGGGCGGTATCCGCAGCTCACAGCTGAGGCAGGTCACAGCCCGTaGACGGTGTTTGGTTTGCAG +
Preference number: 4 (lower is better)
Translates to: LRLRAGPIAGRYPQLTAEAGHSP*TVFGLQ
Trigger: CTGCAAACCAAACACCGTGCACGGGCTGTGACCTGC...CTCAGCTGTGAGCTGCGGATACCGCCCGGCAATGGGACCTGCTCTTAACCTCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR CCA 90 bp TTGAGGTTAAGAGCAGGTCCCATTGCCGGGCGGTATCCGCAGCTCACAGCTGAGCTTCCTCCTGTAGTCTaGCCTCCTCCAACTGCTGGG +
Preference number: 4 (lower is better)
Translates to: LRLRAGPIAGRYPQLTAELPPVV*PPPTAG
Trigger: CCCAGCAGTTGGAGGAGGCCAGACTACAGGAGGAAG...CTCAGCTGTGAGCTGCGGATACCGCCCGGCAATGGGACCTGCTCTTAACCTCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR TCA 90 bp TTGAGGTTAAGAGCAGGTCCCATTGCCGGGCGGTATCCGCAGCTCACAGCTGAGCAATGCAAAGGCTGGTaGCTTGGGGACGGTGATTGG +
Preference number: 4 (lower is better)
Translates to: LRLRAGPIAGRYPQLTAEQCKGW*LGDGDW
Trigger: CCAATCACCGTCCCCAAGTCACCAGCCTTTGCATTG...CTCAGCTGTGAGCTGCGGATACCGCCCGGCAATGGGACCTGCTCTTAACCTCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR TCA 90 bp GTTATCAGCACCAGTAAGGAAAGAACGTGCCTTAACGGCAGCCCCACCCAGAGCGCAAGGGAAGTGCCTTaGACTTGGGCACCTCCCCTT +
Preference number: 4 (lower is better)
Translates to: VISTSKERTCLNGSPTQSAREVP*TWAPPL
Trigger: AAGGGGAGGTGCCCAAGTTCAAGGCACTTCCCTTGC...GCTCTGGGTGGGGCTGCCGTTAAGGCACGTTCTTTCCTTACTGGTGCTGATAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR CCA 90 bp TTGAGGTTAAGAGCAGGTCCCATTGCCGGGCGGTATCCGCAGCTCACAGCTGAGGGGTGGTTTCACAGGTaGTTTCTTGGGCAAGATGGG +
Preference number: 4 (lower is better)
Translates to: LRLRAGPIAGRYPQLTAEGWFHR*FLGQDG
Trigger: CCCATCTTGCCCAAGAAACCACCTGTGAAACCACCC...CTCAGCTGTGAGCTGCGGATACCGCCCGGCAATGGGACCTGCTCTTAACCTCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR GCA 90 bp GTTATCAGCACCAGTAAGGAAAGAACGTGCCTTAACGGCAGCCCCACCCAGAGCGCTCTGCTGTACTTTTaGAGGTCACAGCCCGTGCAC +
Preference number: 4 (lower is better)
Translates to: VISTSKERTCLNGSPTQSALLYF*RSQPVH
Trigger: GTGCACGGGCTGTGACCTGCAAAAGTACAGCAGAGC...GCTCTGGGTGGGGCTGCCGTTAAGGCACGTTCTTTCCTTACTGGTGCTGATAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR TCA 90 bp GTTATCAGCACCAGTAAGGAAAGAACGTGCCTTAACGGCAGCCCCACCCAGAGCCAGAGGCTGGTCACTTaGCTTTATCTCCAGACCCTG +
Preference number: 4 (lower is better)
Translates to: VISTSKERTCLNGSPTQSQRLVT*LYLQTL
Trigger: CAGGGTCTGGAGATAAAGTCAAGTGACCAGCCTCTG...GCTCTGGGTGGGGCTGCCGTTAAGGCACGTTCTTTCCTTACTGGTGCTGATAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR GCA 90 bp TTGAGGTTAAGAGCAGGTCCCATTGCCGGGCGGTATCCGCAGCTCACAGCTGAGGAGTCTGTGGGTCTCTaGAAATCTTGGTCACAGAAG +
Preference number: 4 (lower is better)
Translates to: LRLRAGPIAGRYPQLTAEESVGL*KSWSQK
Trigger: CTTCTGTGACCAAGATTTGCAGAGACCCACAGACTC...CTCAGCTGTGAGCTGCGGATACCGCCCGGCAATGGGACCTGCTCTTAACCTCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR CCA 90 bp TTGAGGTTAAGAGCAGGTCCCATTGCCGGGCGGTATCCGCAGCTCACAGCTGAGGTTTCTTGGGCAAGATaGGCCCACCTTCAAGTATTC +
Preference number: 4 (lower is better)
Translates to: LRLRAGPIAGRYPQLTAEVSWAR*AHLQVF
Trigger: GAATACTTGAAGGTGGGCCCATCTTGCCCAAGAAAC...CTCAGCTGTGAGCTGCGGATACCGCCCGGCAATGGGACCTGCTCTTAACCTCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR CCA 90 bp GTTATCAGCACCAGTAAGGAAAGAACGTGCCTTAACGGCAGCCCCACCCAGAGCCTTGCCTCTGGGATTTaGGGCTTAAAAGGCACCCCA +
Preference number: 4 (lower is better)
Translates to: VISTSKERTCLNGSPTQSLASGI*GLKGTP
Trigger: TGGGGTGCCTTTTAAGCCCCAAATCCCAGAGGCAAG...GCTCTGGGTGGGGCTGCCGTTAAGGCACGTTCTTTCCTTACTGGTGCTGATAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR TCA 90 bp GTTATCAGCACCAGTAAGGAAAGAACGTGCCTTAACGGCAGCCCCACCCAGAGCTCTCTCCATGCCCAATaGCAAAGCAAGACGGTCCTA +
Preference number: 4 (lower is better)
Translates to: VISTSKERTCLNGSPTQSSLHAQ*QSKTVL
Trigger: TAGGACCGTCTTGCTTTGTCATTGGGCATGGAGAGA...GCTCTGGGTGGGGCTGCCGTTAAGGCACGTTCTTTCCTTACTGGTGCTGATAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR GCA 90 bp GTTATCAGCACCAGTAAGGAAAGAACGTGCCTTAACGGCAGCCCCACCCAGAGCTCTTCTTCCAGCTGGTaGTTCCAAGTCTGTGCCTTC +
Preference number: 4 (lower is better)
Translates to: VISTSKERTCLNGSPTQSSSSSW*FQVCAF
Trigger: GAAGGCACAGACTTGGAAGCACCAGCTGGAAGAAGA...GCTCTGGGTGGGGCTGCCGTTAAGGCACGTTCTTTCCTTACTGGTGCTGATAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR GCA 90 bp TTGAGGTTAAGAGCAGGTCCCATTGCCGGGCGGTATCCGCAGCTCACAGCTGAGCCAGACCCTGGTACTTaGGTATTGGATTTGCCTTAT +
Preference number: 4 (lower is better)
Translates to: LRLRAGPIAGRYPQLTAEPDPGT*VLDLPY
Trigger: ATAAGGCAAATCCAATACGCAAGTACCAGGGTCTGG...CTCAGCTGTGAGCTGCGGATACCGCCCGGCAATGGGACCTGCTCTTAACCTCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR CCA 90 bp TTGAGGTTAAGAGCAGGTCCCATTGCCGGGCGGTATCCGCAGCTCACAGCTGAGGCAGGTCACCTTCTGTaGTTTAATCAGTCTATCAGG +
Preference number: 4 (lower is better)
Translates to: LRLRAGPIAGRYPQLTAEAGHLL*FNQSIR
Trigger: CCTGATAGACTGATTAAACCACAGAAGGTGACCTGC...CTCAGCTGTGAGCTGCGGATACCGCCCGGCAATGGGACCTGCTCTTAACCTCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR CCA 90 bp GTTATCAGCACCAGTAAGGAAAGAACGTGCCTTAACGGCAGCCCCACCCAGAGCAGTTCTTCTTCCAGCTaGTGCTTCCAAGTCTGTGCC +
Preference number: 4 (lower is better)
Translates to: VISTSKERTCLNGSPTQSSSSSS*CFQVCA
Trigger: GGCACAGACTTGGAAGCACCAGCTGGAAGAAGAACT...GCTCTGGGTGGGGCTGCCGTTAAGGCACGTTCTTTCCTTACTGGTGCTGATAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR CCA 90 bp TTGAGGTTAAGAGCAGGTCCCATTGCCGGGCGGTATCCGCAGCTCACAGCTGAGCTGGTACTTGCGTATTaGATTTGCCTTATGCACCAG +
Preference number: 4 (lower is better)
Translates to: LRLRAGPIAGRYPQLTAELVLAY*ICLMHQ
Trigger: CTGGTGCATAAGGCAAATCCAATACGCAAGTACCAG...CTCAGCTGTGAGCTGCGGATACCGCCCGGCAATGGGACCTGCTCTTAACCTCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR CCA 90 bp TTGAGGTTAAGAGCAGGTCCCATTGCCGGGCGGTATCCGCAGCTCACAGCTGAGATCGAGTGGAGAATTTaGGAGATACAGGCACAGTCA +
Preference number: 4 (lower is better)
Translates to: LRLRAGPIAGRYPQLTAEIEWRI*EIQAQS
Trigger: TGACTGTGCCTGTATCTCCCAAATTCTCCACTCGAT...CTCAGCTGTGAGCTGCGGATACCGCCCGGCAATGGGACCTGCTCTTAACCTCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR TCA 90 bp GTTATCAGCACCAGTAAGGAAAGAACGTGCCTTAACGGCAGCCCCACCCAGAGCGGCTGGAGTTTTTCTTaGTATGGCTGCCTCAACTTC +
Preference number: 4 (lower is better)
Translates to: VISTSKERTCLNGSPTQSGWSFS*YGCLNF
Trigger: GAAGTTGAGGCAGCCATATCAAGAAAAACTCCAGCC...GCTCTGGGTGGGGCTGCCGTTAAGGCACGTTCTTTCCTTACTGGTGCTGATAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR TCA 90 bp TTGAGGTTAAGAGCAGGTCCCATTGCCGGGCGGTATCCGCAGCTCACAGCTGAGGTAGAATTTCATCGATaGTTACAGGAGTGGCACATC +
Preference number: 4 (lower is better)
Translates to: LRLRAGPIAGRYPQLTAEVEFHR*LQEWHI
Trigger: GATGTGCCACTCCTGTAATCATCGATGAAATTCTAC...CTCAGCTGTGAGCTGCGGATACCGCCCGGCAATGGGACCTGCTCTTAACCTCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR GCA 90 bp TTGAGGTTAAGAGCAGGTCCCATTGCCGGGCGGTATCCGCAGCTCACAGCTGAGCTCTTCTCCAGCTCTTaGTCCTCAGTACTTTTTAGA +
Preference number: 4 (lower is better)
Translates to: LRLRAGPIAGRYPQLTAELFSSS*SSVLFR
Trigger: TCTAAAAAGTACTGAGGAGCAAGAGCTGGAGAAGAG...CTCAGCTGTGAGCTGCGGATACCGCCCGGCAATGGGACCTGCTCTTAACCTCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR GCA 90 bp CACGGTTCCCTGTTGTTATCAGCACCAGTAAGGAAAGAACGTGCCTTAACGGCAGCTCTGCTGTACTTTTaGAGGTCACAGCCCGTGCAC +
Preference number: 4 (lower is better)
Translates to: HGSLLLSAPVRKERALTAALLYF*RSQPVH
Trigger: GTGCACGGGCTGTGACCTGCAAAAGTACAGCAGAGC...TGCCGTTAAGGCACGTTCTTTCCTTACTGGTGCTGATAACAACAGGGAACCGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR CCA 90 bp TCTAGTCAGAGTGAAGACCCATATAAAAGGCCGGCTGATGGTTTAAAGGAAGTATCGCCAAGAGAAGCGTaGCCCGAAGCCCCTGCTCGC +
Preference number: 4 (lower is better)
Translates to: SSQSEDPYKRPADGLKEVSPREA*PEAPAR
Trigger: GCGAGCAGGGGCTTCGGGCCACGCTTCTCTTGGCGA...TACTTCCTTTAAACCATCAGCCGGCCTTTTATATGGGTCTTCACTCTGACTAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR TCA 90 bp GTTATCAGCACCAGTAAGGAAAGAACGTGCCTTAACGGCAGCCCCACCCAGAGCAGTCAACTGATTTGGTaGCCTGGCTCACTGATTTCT +
Preference number: 4 (lower is better)
Translates to: VISTSKERTCLNGSPTQSSQLIW*PGSLIS
Trigger: AGAAATCAGTGAGCCAGGTCACCAAATCAGTTGACT...GCTCTGGGTGGGGCTGCCGTTAAGGCACGTTCTTTCCTTACTGGTGCTGATAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR TCA 90 bp CACGGTTCCCTGTTGTTATCAGCACCAGTAAGGAAAGAACGTGCCTTAACGGCACAGAGGCTGGTCACTTaGCTTTATCTCCAGACCCTG +
Preference number: 4 (lower is better)
Translates to: HGSLLLSAPVRKERALTAQRLVT*LYLQTL
Trigger: CAGGGTCTGGAGATAAAGTCAAGTGACCAGCCTCTG...TGCCGTTAAGGCACGTTCTTTCCTTACTGGTGCTGATAACAACAGGGAACCGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR GCA 90 bp AGGCCGGCTGATGGTTTAAAGGAAGTAACTACATGGAGTCTAATCGAGACATTCAGCCTGCTGCGTGGCTaGTGTGAGGCTCCCCATGAA +
Preference number: 4 (lower is better)
Translates to: RPADGLKEVTTWSLIETFSLLRG*CEAPHE
Trigger: TTCATGGGGAGCCTCACAGCAGCCACGCAGCAGGCT...GAATGTCTCGATTAGACTCCATGTAGTTACTTCCTTTAAACCATCAGCCGGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR CCA 90 bp GTTATCAGCACCAGTAAGGAAAGAACGTGCCTTAACGGCAGCCCCACCCAGAGCCTGGTACTTGCGTATTaGATTTGCCTTATGCACCAG +
Preference number: 4 (lower is better)
Translates to: VISTSKERTCLNGSPTQSLVLAY*ICLMHQ
Trigger: CTGGTGCATAAGGCAAATCCAATACGCAAGTACCAG...GCTCTGGGTGGGGCTGCCGTTAAGGCACGTTCTTTCCTTACTGGTGCTGATAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR TCA 90 bp CACGGTTCCCTGTTGTTATCAGCACCAGTAAGGAAAGAACGTGCCTTAACGGCATCTCTCCATGCCCAATaGCAAAGCAAGACGGTCCTA +
Preference number: 4 (lower is better)
Translates to: HGSLLLSAPVRKERALTASLHAQ*QSKTVL
Trigger: TAGGACCGTCTTGCTTTGTCATTGGGCATGGAGAGA...TGCCGTTAAGGCACGTTCTTTCCTTACTGGTGCTGATAACAACAGGGAACCGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR GCA 90 bp GTTATCAGCACCAGTAAGGAAAGAACGTGCCTTAACGGCAGCCCCACCCAGAGCATCTCCACCACCTCTTaGTGCATTTTCATACTCTTC +
Preference number: 4 (lower is better)
Translates to: VISTSKERTCLNGSPTQSISTTS*CIFILF
Trigger: GAAGAGTATGAAAATGCAGCAAGAGGTGGTGGAGAT...GCTCTGGGTGGGGCTGCCGTTAAGGCACGTTCTTTCCTTACTGGTGCTGATAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR CCA 90 bp TTGAGGTTAAGAGCAGGTCCCATTGCCGGGCGGTATCCGCAGCTCACAGCTGAGGAGTGGCACATCTCTTaGCTTTCATTTTTACATGAT +
Preference number: 4 (lower is better)
Translates to: LRLRAGPIAGRYPQLTAEEWHIS*LSFLHD
Trigger: ATCATGTAAAAATGAAAGCCAAGAGATGTGCCACTC...CTCAGCTGTGAGCTGCGGATACCGCCCGGCAATGGGACCTGCTCTTAACCTCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR CCA 90 bp GTTATCAGCACCAGTAAGGAAAGAACGTGCCTTAACGGCAGCCCCACCCAGAGCCTTCCTCATCTTCTTTaGTGGGCATTCGAATTCTGT +
Preference number: 4 (lower is better)
Translates to: VISTSKERTCLNGSPTQSLPHLL*WAFEFC
Trigger: ACAGAATTCGAATGCCCACCAAAGAAGATGAGGAAG...GCTCTGGGTGGGGCTGCCGTTAAGGCACGTTCTTTCCTTACTGGTGCTGATAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR CCA 90 bp GTTATCAGCACCAGTAAGGAAAGAACGTGCCTTAACGGCAGCCCCACCCAGAGCAAAAGTCTGGAGAAATaGGTTCTCTCCATGCCCAAT +
Preference number: 4 (lower is better)
Translates to: VISTSKERTCLNGSPTQSKSLEK*VLSMPN
Trigger: ATTGGGCATGGAGAGAACCCATTTCTCCAGACTTTT...GCTCTGGGTGGGGCTGCCGTTAAGGCACGTTCTTTCCTTACTGGTGCTGATAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR TCA 90 bp AGGCCGGCTGATGGTTTAAAGGAAGTAACTACATGGAGTCTAATCGAGACATTCCTAGGGGCTGGAAGGTaGACTTCAGCCGTTCCAAAC +
Preference number: 4 (lower is better)
Translates to: RPADGLKEVTTWSLIETFLGAGR*TSAVPN
Trigger: GTTTGGAACGGCTGAAGTTCACCTTCCAGCCCCTAG...GAATGTCTCGATTAGACTCCATGTAGTTACTTCCTTTAAACCATCAGCCGGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR TCA 90 bp GTTATCAGCACCAGTAAGGAAAGAACGTGCCTTAACGGCAGCCCCACCCAGAGCAGAGCTTTTAACTTGTaGCATTGTCTCCCACTTAAC +
Preference number: 4 (lower is better)
Translates to: VISTSKERTCLNGSPTQSRAFNL*HCLPLN
Trigger: GTTAAGTGGGAGACAATGTCACAAGTTAAAAGCTCT...GCTCTGGGTGGGGCTGCCGTTAAGGCACGTTCTTTCCTTACTGGTGCTGATAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR GCA 90 bp CACGGTTCCCTGTTGTTATCAGCACCAGTAAGGAAAGAACGTGCCTTAACGGCAGAGTCTGTGGGTCTCTaGAAATCTTGGTCACAGAAG +
Preference number: 4 (lower is better)
Translates to: HGSLLLSAPVRKERALTAESVGL*KSWSQK
Trigger: CTTCTGTGACCAAGATTTGCAGAGACCCACAGACTC...TGCCGTTAAGGCACGTTCTTTCCTTACTGGTGCTGATAACAACAGGGAACCGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR GCA 90 bp ACTACATGGAGTCTAATCGAGACATTCATGAGTTACATCTCATTATTAGCCTTAGCCCCACCCAGAGCCTaGTGCGTGGCTGCTGTGAGG +
Preference number: 4 (lower is better)
Translates to: TTWSLIETFMSYISLLALAPPRA*CVAAVR
Trigger: CCTCACAGCAGCCACGCAGCAGGCTCTGGGTGGGGC...TAAGGCTAATAATGAGATGTAACTCATGAATGTCTCGATTAGACTCCATGTAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR CCA 90 bp TCTAGTCAGAGTGAAGACCCATATAAAAGGCCGGCTGATGGTTTAAAGGAAGTAAACGGCGCTAGGGGCTaGAAGGTGAACTTCAGCCGT +
Preference number: 4 (lower is better)
Translates to: SSQSEDPYKRPADGLKEVNGARG*KVNFSR
Trigger: ACGGCTGAAGTTCACCTTCCAGCCCCTAGCGCCGTT...TACTTCCTTTAAACCATCAGCCGGCCTTTTATATGGGTCTTCACTCTGACTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR CCA 90 bp CACGGTTCCCTGTTGTTATCAGCACCAGTAAGGAAAGAACGTGCCTTAACGGCACAGTATGTCTACCCTTaGCTTTCTCTGGGGAAGATG +
Preference number: 4 (lower is better)
Translates to: HGSLLLSAPVRKERALTAQYVYP*LSLGKM
Trigger: CATCTTCCCCAGAGAAAGCCAAGGGTAGACATACTG...TGCCGTTAAGGCACGTTCTTTCCTTACTGGTGCTGATAACAACAGGGAACCGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR CCA 90 bp CACGGTTCCCTGTTGTTATCAGCACCAGTAAGGAAAGAACGTGCCTTAACGGCACAGTACAGGAGTCTGTaGGTCTCTGCAAATCTTGGT +
Preference number: 4 (lower is better)
Translates to: HGSLLLSAPVRKERALTAQYRSL*VSANLG
Trigger: ACCAAGATTTGCAGAGACCCACAGACTCCTGTACTG...TGCCGTTAAGGCACGTTCTTTCCTTACTGGTGCTGATAACAACAGGGAACCGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR CCA 90 bp CACGGTTCCCTGTTGTTATCAGCACCAGTAAGGAAAGAACGTGCCTTAACGGCAAATAGGCTCGGTGGGTaGTTTCACAGGTGGTTTCTT +
Preference number: 4 (lower is better)
Translates to: HGSLLLSAPVRKERALTANRLGG*FHRWFL
Trigger: AAGAAACCACCTGTGAAACCACCCACCGAGCCTATT...TGCCGTTAAGGCACGTTCTTTCCTTACTGGTGCTGATAACAACAGGGAACCGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR TCA 90 bp CACGGTTCCCTGTTGTTATCAGCACCAGTAAGGAAAGAACGTGCCTTAACGGCAGGAAGAACAAGCATTTaGCGGAATGGATTGTTCCAC +
Preference number: 4 (lower is better)
Translates to: HGSLLLSAPVRKERALTAGRTSI*RNGLFH
Trigger: GTGGAACAATCCATTCCGTCAAATGCTTGTTCTTCC...TGCCGTTAAGGCACGTTCTTTCCTTACTGGTGCTGATAACAACAGGGAACCGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR TCA 90 bp AGGCCGGCTGATGGTTTAAAGGAAGTAACTACATGGAGTCTAATCGAGACATTCGGAACAAAGGGCTCCTaGGAGATGACGGTGTTTGGA +
Preference number: 4 (lower is better)
Translates to: RPADGLKEVTTWSLIETFGTKGS*EMTVFG
Trigger: TCCAAACACCGTCATCTCTCAGGAGCCCTTTGTTCC...GAATGTCTCGATTAGACTCCATGTAGTTACTTCCTTTAAACCATCAGCCGGCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR GCA 90 bp CACGGTTCCCTGTTGTTATCAGCACCAGTAAGGAAAGAACGTGCCTTAACGGCATTCTCAAAGGAGTTTTaGCCTGAAAAAGCCCTCCAG +
Preference number: 4 (lower is better)
Translates to: HGSLLLSAPVRKERALTAFSKEF*PEKALQ
Trigger: CTGGAGGGCTTTTTCAGGGCAAAACTCCTTTGAGAA...TGCCGTTAAGGCACGTTCTTTCCTTACTGGTGCTGATAACAACAGGGAACCGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR GCA 90 bp AGGCCGGCTGATGGTTTAAAGGAAGTAACTACATGGAGTCTAATCGAGACATTCCTCAGCCTCCAGCTCTaGTGTACTTTTGCAGGTCAC +
Preference number: 4 (lower is better)
Translates to: RPADGLKEVTTWSLIETFLSLQL*CTFAGH
Trigger: GTGACCTGCAAAAGTACAGCAGAGCTGGAGGCTGAG...GAATGTCTCGATTAGACTCCATGTAGTTACTTCCTTTAAACCATCAGCCGGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR GCA 90 bp CACGGTTCCCTGTTGTTATCAGCACCAGTAAGGAAAGAACGTGCCTTAACGGCAAATGGGTTCTCTCCATaGCCAATGACAAAGCAAGAC +
Preference number: 4 (lower is better)
Translates to: HGSLLLSAPVRKERALTANGFSP*PMTKQD
Trigger: GTCTTGCTTTGTCATTGGGCATGGAGAGAACCCATT...TGCCGTTAAGGCACGTTCTTTCCTTACTGGTGCTGATAACAACAGGGAACCGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR CCA 90 bp TTAAAGGAAGTAACTACATGGAGTCTAATCGAGACATTCATGAGTTACATCTCATCGCCAAGAGAAGCGTaGCCCGAAGCCCCTGCTCGC +
Preference number: 4 (lower is better)
Translates to: LKEVTTWSLIETFMSYISSPREA*PEAPAR
Trigger: GCGAGCAGGGGCTTCGGGCCACGCTTCTCTTGGCGA...TGAGATGTAACTCATGAATGTCTCGATTAGACTCCATGTAGTTACTTCCTTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR CCA 90 bp AGGCCGGCTGATGGTTTAAAGGAAGTAACTACATGGAGTCTAATCGAGACATTCGGGTGGTTTCACAGGTaGTTTCTTGGGCAAGATGGG +
Preference number: 4 (lower is better)
Translates to: RPADGLKEVTTWSLIETFGWFHR*FLGQDG
Trigger: CCCATCTTGCCCAAGAAACCACCTGTGAAACCACCC...GAATGTCTCGATTAGACTCCATGTAGTTACTTCCTTTAAACCATCAGCCGGCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR CCA 90 bp AGGCCGGCTGATGGTTTAAAGGAAGTAACTACATGGAGTCTAATCGAGACATTCCTTGCCTCTGGGATTTaGGGCTTAAAAGGCACCCCA +
Preference number: 4 (lower is better)
Translates to: RPADGLKEVTTWSLIETFLASGI*GLKGTP
Trigger: TGGGGTGCCTTTTAAGCCCCAAATCCCAGAGGCAAG...GAATGTCTCGATTAGACTCCATGTAGTTACTTCCTTTAAACCATCAGCCGGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR TCA 90 bp AGGCCGGCTGATGGTTTAAAGGAAGTAACTACATGGAGTCTAATCGAGACATTCGAAGTGGAAGTCAACTaGTTTGGTGACCTGGCTCAC +
Preference number: 4 (lower is better)
Translates to: RPADGLKEVTTWSLIETFEVEVN*FGDLAH
Trigger: GTGAGCCAGGTCACCAAATCAGTTGACTTCCACTTC...GAATGTCTCGATTAGACTCCATGTAGTTACTTCCTTTAAACCATCAGCCGGCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR TCA 90 bp CACGGTTCCCTGTTGTTATCAGCACCAGTAAGGAAAGAACGTGCCTTAACGGCATTCTTGCTCCTCAAATaGTATCTGTTAGGGGTTCGT +
Preference number: 4 (lower is better)
Translates to: HGSLLLSAPVRKERALTAFLLLK*YLLGVR
Trigger: ACGAACCCCTAACAGATATCATTTGAGGAGCAAGAA...TGCCGTTAAGGCACGTTCTTTCCTTACTGGTGCTGATAACAACAGGGAACCGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR GCA 90 bp TCTAGTCAGAGTGAAGACCCATATAAAAGGCCGGCTGATGGTTTAAAGGAAGTAATGAGGCAAGGGAAGTaGCTTGAACTTGGGCACCTC +
Preference number: 4 (lower is better)
Translates to: SSQSEDPYKRPADGLKEVMRQGK*LELGHL
Trigger: GAGGTGCCCAAGTTCAAGGCACTTCCCTTGCCTCAT...TACTTCCTTTAAACCATCAGCCGGCCTTTTATATGGGTCTTCACTCTGACTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR GCA 90 bp TCTAGTCAGAGTGAAGACCCATATAAAAGGCCGGCTGATGGTTTAAAGGAAGTAAGTAAGGAAAGAACGTaGCTTAACGGCAGCCCCACC +
Preference number: 4 (lower is better)
Translates to: SSQSEDPYKRPADGLKEVSKERT*LNGSPT
Trigger: GGTGGGGCTGCCGTTAAGGCACGTTCTTTCCTTACT...TACTTCCTTTAAACCATCAGCCGGCCTTTTATATGGGTCTTCACTCTGACTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR CCA 90 bp CACGGTTCCCTGTTGTTATCAGCACCAGTAAGGAAAGAACGTGCCTTAACGGCACACCTTCAAGTATTCTaGGATCAAGTTCACGTGCTT +
Preference number: 4 (lower is better)
Translates to: HGSLLLSAPVRKERALTAHLQVF*DQVHVL
Trigger: AAGCACGTGAACTTGATCCCAGAATACTTGAAGGTG...TGCCGTTAAGGCACGTTCTTTCCTTACTGGTGCTGATAACAACAGGGAACCGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR TCA 90 bp TACATGGAGTCTAATCGAGACATTCATGAGTTACATCTCATTATTAGCCTTAGTGCCTCGCCTCAGATCTaGCAACGAAGCGCGAGCCAA +
Preference number: 4 (lower is better)
Translates to: YMESNRDIHELHLIISLSASPQI*QRSASQ
Trigger: TTGGCTCGCGCTTCGTTGTCAGATCTGAGGCGAGGC...ACTAAGGCTAATAATGAGATGTAACTCATGAATGTCTCGATTAGACTCCATGTA
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR TCA 90 bp AGGCCGGCTGATGGTTTAAAGGAAGTAACTACATGGAGTCTAATCGAGACATTCGGCTGGAGTTTTTCTTaGTATGGCTGCCTCAACTTC +
Preference number: 4 (lower is better)
Translates to: RPADGLKEVTTWSLIETFGWSFS*YGCLNF
Trigger: GAAGTTGAGGCAGCCATATCAAGAAAAACTCCAGCC...GAATGTCTCGATTAGACTCCATGTAGTTACTTCCTTTAAACCATCAGCCGGCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR GCA 90 bp TGGTTTAAAGGAAGTAACTACATGGAGTCTAATCGAGACATTCATGAGTTACATAGCCTGCTGCGTGGCTaGTGTGAGGCTCCCCATGAA +
Preference number: 4 (lower is better)
Translates to: WFKGSNYMESNRDIHELHSLLRG*CEAPHE
Trigger: TTCATGGGGAGCCTCACAGCAGCCACGCAGCAGGCT...ATGTAACTCATGAATGTCTCGATTAGACTCCATGTAGTTACTTCCTTTAAACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR CCA 90 bp TCTAGTCAGAGTGAAGACCCATATAAAAGGCCGGCTGATGGTTTAAAGGAAGTAAACTGCTGGGCTTTCTaGGCTTCTACCTCAGCCATT +
Preference number: 4 (lower is better)
Translates to: SSQSEDPYKRPADGLKEVNCWAF*ASTSAI
Trigger: AATGGCTGAGGTAGAAGCCCAGAAAGCCCAGCAGTT...TACTTCCTTTAAACCATCAGCCGGCCTTTTATATGGGTCTTCACTCTGACTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR CCA 90 bp CACGGTTCCCTGTTGTTATCAGCACCAGTAAGGAAAGAACGTGCCTTAACGGCATTTATCTCCAGACCCTaGTACTTGCGTATTGGATTT +
Preference number: 4 (lower is better)
Translates to: HGSLLLSAPVRKERALTAFISRP*YLRIGF
Trigger: AAATCCAATACGCAAGTACCAGGGTCTGGAGATAAA...TGCCGTTAAGGCACGTTCTTTCCTTACTGGTGCTGATAACAACAGGGAACCGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR CCA 90 bp TCTAGTCAGAGTGAAGACCCATATAAAAGGCCGGCTGATGGTTTAAAGGAAGTAGGCACAGTCAGAGGCTaGTCACTTGACTTTATCTCC +
Preference number: 4 (lower is better)
Translates to: SSQSEDPYKRPADGLKEVGTVRG*SLDFIS
Trigger: GGAGATAAAGTCAAGTGACCAGCCTCTGACTGTGCC...TACTTCCTTTAAACCATCAGCCGGCCTTTTATATGGGTCTTCACTCTGACTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR TCA 90 bp TTAAAGGAAGTAACTACATGGAGTCTAATCGAGACATTCATGAGTTACATCTCAGCAAGGGAAGTGCCTTaGACTTGGGCACCTCCCCTT +
Preference number: 4 (lower is better)
Translates to: LKEVTTWSLIETFMSYISAREVP*TWAPPL
Trigger: AAGGGGAGGTGCCCAAGTTCAAGGCACTTCCCTTGC...TGAGATGTAACTCATGAATGTCTCGATTAGACTCCATGTAGTTACTTCCTTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR TCA 90 bp TTAAAGGAAGTAACTACATGGAGTCTAATCGAGACATTCATGAGTTACATCTCAAGGGCTCCTGAGAGATaGCGGTGTTTGGACGAGCCT +
Preference number: 4 (lower is better)
Translates to: LKEVTTWSLIETFMSYISRAPER*RCLDEP
Trigger: AGGCTCGTCCAAACACCGTCATCTCTCAGGAGCCCT...TGAGATGTAACTCATGAATGTCTCGATTAGACTCCATGTAGTTACTTCCTTTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR TCA 90 bp TCTAGTCAGAGTGAAGACCCATATAAAAGGCCGGCTGATGGTTTAAAGGAAGTAAAGGCCCTCAGCAACTaGTTTCTTCTCTTTCTTGGG +
Preference number: 4 (lower is better)
Translates to: SSQSEDPYKRPADGLKEVKALSN*FLLFLG
Trigger: CCCAAGAAAGAGAAGAAATCAGTTGCTGAGGGCCTT...TACTTCCTTTAAACCATCAGCCGGCCTTTTATATGGGTCTTCACTCTGACTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR GCA 90 bp AGGCCGGCTGATGGTTTAAAGGAAGTAACTACATGGAGTCTAATCGAGACATTCGTCTTCAACTTGCTGTaGAAGGGGCACATATGTAGA +
Preference number: 4 (lower is better)
Translates to: RPADGLKEVTTWSLIETFVFNLL*KGHICR
Trigger: TCTACATATGTGCCCCTTGCACAGCAAGTTGAAGAC...GAATGTCTCGATTAGACTCCATGTAGTTACTTCCTTTAAACCATCAGCCGGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR GCA 90 bp ACTACATGGAGTCTAATCGAGACATTCATGAGTTACATCTCATTATTAGCCTTAGCAGGTCACAGCCCGTaGACGGTGTTTGGTTTGCAG +
Preference number: 4 (lower is better)
Translates to: TTWSLIETFMSYISLLALAGHSP*TVFGLQ
Trigger: CTGCAAACCAAACACCGTGCACGGGCTGTGACCTGC...TAAGGCTAATAATGAGATGTAACTCATGAATGTCTCGATTAGACTCCATGTAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR CCA 90 bp TGGTTTAAAGGAAGTAACTACATGGAGTCTAATCGAGACATTCATGAGTTACATAACGGCGCTAGGGGCTaGAAGGTGAACTTCAGCCGT +
Preference number: 4 (lower is better)
Translates to: WFKGSNYMESNRDIHELHNGARG*KVNFSR
Trigger: ACGGCTGAAGTTCACCTTCCAGCCCCTAGCGCCGTT...ATGTAACTCATGAATGTCTCGATTAGACTCCATGTAGTTACTTCCTTTAAACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR CCA 90 bp CACGGTTCCCTGTTGTTATCAGCACCAGTAAGGAAAGAACGTGCCTTAACGGCAGTAAGTGTTGTCAACTaGTTTCAAAGGTGTGACAAT +
Preference number: 4 (lower is better)
Translates to: HGSLLLSAPVRKERALTAVSVVN*FQRCDN
Trigger: ATTGTCACACCTTTGAAACCAGTTGACAACACTTAC...TGCCGTTAAGGCACGTTCTTTCCTTACTGGTGCTGATAACAACAGGGAACCGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR CCA 90 bp AGGCCGGCTGATGGTTTAAAGGAAGTAACTACATGGAGTCTAATCGAGACATTCTCATCTGTGCGGAAGTaGAAGTCAACTGATTTGGTG +
Preference number: 4 (lower is better)
Translates to: RPADGLKEVTTWSLIETFSSVRK*KSTDLV
Trigger: CACCAAATCAGTTGACTTCCACTTCCGCACAGATGA...GAATGTCTCGATTAGACTCCATGTAGTTACTTCCTTTAAACCATCAGCCGGCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR CCA 90 bp TCTAGTCAGAGTGAAGACCCATATAAAAGGCCGGCTGATGGTTTAAAGGAAGTACAGTACAGGAGTCTGTaGGTCTCTGCAAATCTTGGT +
Preference number: 4 (lower is better)
Translates to: SSQSEDPYKRPADGLKEVQYRSL*VSANLG
Trigger: ACCAAGATTTGCAGAGACCCACAGACTCCTGTACTG...TACTTCCTTTAAACCATCAGCCGGCCTTTTATATGGGTCTTCACTCTGACTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR CCA 90 bp TCTAGTCAGAGTGAAGACCCATATAAAAGGCCGGCTGATGGTTTAAAGGAAGTAGTTTCTTGGGCAAGATaGGCCCACCTTCAAGTATTC +
Preference number: 4 (lower is better)
Translates to: SSQSEDPYKRPADGLKEVVSWAR*AHLQVF
Trigger: GAATACTTGAAGGTGGGCCCATCTTGCCCAAGAAAC...TACTTCCTTTAAACCATCAGCCGGCCTTTTATATGGGTCTTCACTCTGACTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR CCA 90 bp CACGGTTCCCTGTTGTTATCAGCACCAGTAAGGAAAGAACGTGCCTTAACGGCATTTGATTCTCGCTCCTaGATTCTTTTCTCAATTTCC +
Preference number: 4 (lower is better)
Translates to: HGSLLLSAPVRKERALTAFDSRS*ILFSIS
Trigger: GGAAATTGAGAAAAGAATCCAGGAGCGAGAATCAAA...TGCCGTTAAGGCACGTTCTTTCCTTACTGGTGCTGATAACAACAGGGAACCGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR CCA 90 bp TCTAGTCAGAGTGAAGACCCATATAAAAGGCCGGCTGATGGTTTAAAGGAAGTAAGAGATGACGGTGTTTaGACGAGCCTTGAAACAAGC +
Preference number: 4 (lower is better)
Translates to: SSQSEDPYKRPADGLKEVRDDGV*TSLETS
Trigger: GCTTGTTTCAAGGCTCGTCCAAACACCGTCATCTCT...TACTTCCTTTAAACCATCAGCCGGCCTTTTATATGGGTCTTCACTCTGACTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR CCA 90 bp TTAAAGGAAGTAACTACATGGAGTCTAATCGAGACATTCATGAGTTACATCTCAGCCTCCTCCAACTGCTaGGCTTTCTGGGCTTCTACC +
Preference number: 4 (lower is better)
Translates to: LKEVTTWSLIETFMSYISASSNC*AFWAST
Trigger: GGTAGAAGCCCAGAAAGCCCAGCAGTTGGAGGAGGC...TGAGATGTAACTCATGAATGTCTCGATTAGACTCCATGTAGTTACTTCCTTTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR CCA 90 bp TACATGGAGTCTAATCGAGACATTCATGAGTTACATCTCATTATTAGCCTTAGTGCCTCCTCCAACTGCTaGGCTTTCTGGGCTTCTACC +
Preference number: 4 (lower is better)
Translates to: YMESNRDIHELHLIISLSASSNC*AFWAST
Trigger: GGTAGAAGCCCAGAAAGCCCAGCAGTTGGAGGAGGC...ACTAAGGCTAATAATGAGATGTAACTCATGAATGTCTCGATTAGACTCCATGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR CCA 90 bp TTAAAGGAAGTAACTACATGGAGTCTAATCGAGACATTCATGAGTTACATCTCACTTCCTCCTGTAGTCTaGCCTCCTCCAACTGCTGGG +
Preference number: 4 (lower is better)
Translates to: LKEVTTWSLIETFMSYISLPPVV*PPPTAG
Trigger: CCCAGCAGTTGGAGGAGGCCAGACTACAGGAGGAAG...TGAGATGTAACTCATGAATGTCTCGATTAGACTCCATGTAGTTACTTCCTTTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR TCA 90 bp TACATGGAGTCTAATCGAGACATTCATGAGTTACATCTCATTATTAGCCTTAGTCTAGGGGCTGGAAGGTaGACTTCAGCCGTTCCAAAC +
Preference number: 4 (lower is better)
Translates to: YMESNRDIHELHLIISLSLGAGR*TSAVPN
Trigger: GTTTGGAACGGCTGAAGTTCACCTTCCAGCCCCTAG...ACTAAGGCTAATAATGAGATGTAACTCATGAATGTCTCGATTAGACTCCATGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR TCA 90 bp AGGCCGGCTGATGGTTTAAAGGAAGTAACTACATGGAGTCTAATCGAGACATTCGTAGAATTTCATCGATaGTTACAGGAGTGGCACATC +
Preference number: 4 (lower is better)
Translates to: RPADGLKEVTTWSLIETFVEFHR*LQEWHI
Trigger: GATGTGCCACTCCTGTAATCATCGATGAAATTCTAC...GAATGTCTCGATTAGACTCCATGTAGTTACTTCCTTTAAACCATCAGCCGGCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR TCA 90 bp TCTAGTCAGAGTGAAGACCCATATAAAAGGCCGGCTGATGGTTTAAAGGAAGTAAGTCAACTGATTTGGTaGCCTGGCTCACTGATTTCT +
Preference number: 4 (lower is better)
Translates to: SSQSEDPYKRPADGLKEVSQLIW*PGSLIS
Trigger: AGAAATCAGTGAGCCAGGTCACCAAATCAGTTGACT...TACTTCCTTTAAACCATCAGCCGGCCTTTTATATGGGTCTTCACTCTGACTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR TCA 90 bp TTAAAGGAAGTAACTACATGGAGTCTAATCGAGACATTCATGAGTTACATCTCACAATGCAAAGGCTGGTaGCTTGGGGACGGTGATTGG +
Preference number: 4 (lower is better)
Translates to: LKEVTTWSLIETFMSYISQCKGW*LGDGDW
Trigger: CCAATCACCGTCCCCAAGTCACCAGCCTTTGCATTG...TGAGATGTAACTCATGAATGTCTCGATTAGACTCCATGTAGTTACTTCCTTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR TCA 90 bp AGGCCGGCTGATGGTTTAAAGGAAGTAACTACATGGAGTCTAATCGAGACATTCTTCTCCTTCTGTAACTaGCGTTCTTTGTCTCGAGAA +
Preference number: 4 (lower is better)
Translates to: RPADGLKEVTTWSLIETFFSFCN*RSLSRE
Trigger: TTCTCGAGACAAAGAACGTCAGTTACAGAAGGAGAA...GAATGTCTCGATTAGACTCCATGTAGTTACTTCCTTTAAACCATCAGCCGGCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR GCA 90 bp TCTAGTCAGAGTGAAGACCCATATAAAAGGCCGGCTGATGGTTTAAAGGAAGTATCCACCACCTCTTGCTaGATTTTCATACTCTTCTCC +
Preference number: 4 (lower is better)
Translates to: SSQSEDPYKRPADGLKEVSTTSC*IFILFS
Trigger: GGAGAAGAGTATGAAAATGCAGCAAGAGGTGGTGGA...TACTTCCTTTAAACCATCAGCCGGCCTTTTATATGGGTCTTCACTCTGACTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR GCA 90 bp TCTAGTCAGAGTGAAGACCCATATAAAAGGCCGGCTGATGGTTTAAAGGAAGTATGGAAGTCTTCAACTTaGTGTGCAAGGGGCACATAT +
Preference number: 4 (lower is better)
Translates to: SSQSEDPYKRPADGLKEVWKSST*CARGTY
Trigger: ATATGTGCCCCTTGCACAGCAAGTTGAAGACTTCCA...TACTTCCTTTAAACCATCAGCCGGCCTTTTATATGGGTCTTCACTCTGACTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR GCA 90 bp ACTACATGGAGTCTAATCGAGACATTCATGAGTTACATCTCATTATTAGCCTTACTCTTCTCCAGCTCCTaGCGCTCTTTGGCTCTCTTC +
Preference number: 4 (lower is better)
Translates to: TTWSLIETFMSYISLLALLFSSS*RSLALF
Trigger: GAAGAGAGCCAAAGAGCGGCAGGAGCTGGAGAAGAG...TAAGGCTAATAATGAGATGTAACTCATGAATGTCTCGATTAGACTCCATGTAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR GCA 90 bp TGGTTTAAAGGAAGTAACTACATGGAGTCTAATCGAGACATTCATGAGTTACATCTCTTCTCCAGCTCCTaGCGCTCTTTGGCTCTCTTC +
Preference number: 4 (lower is better)
Translates to: WFKGSNYMESNRDIHELHLFSSS*RSLALF
Trigger: GAAGAGAGCCAAAGAGCGGCAGGAGCTGGAGAAGAG...ATGTAACTCATGAATGTCTCGATTAGACTCCATGTAGTTACTTCCTTTAAACCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR CCA 90 bp AGGCCGGCTGATGGTTTAAAGGAAGTAACTACATGGAGTCTAATCGAGACATTCACTGATTTGGTGACCTaGCTCACTGATTTCTTCACA +
Preference number: 4 (lower is better)
Translates to: RPADGLKEVTTWSLIETFTDLVT*LTDFFT
Trigger: TGTGAAGAAATCAGTGAGCCAGGTCACCAAATCAGT...GAATGTCTCGATTAGACTCCATGTAGTTACTTCCTTTAAACCATCAGCCGGCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR CCA 90 bp TCTAGTCAGAGTGAAGACCCATATAAAAGGCCGGCTGATGGTTTAAAGGAAGTAGGTCTCTGCAAATCTTaGTCACAGAAGATTTGGAGG +
Preference number: 4 (lower is better)
Translates to: SSQSEDPYKRPADGLKEVGLCKS*SQKIWR
Trigger: CCTCCAAATCTTCTGTGACCAAGATTTGCAGAGACC...TACTTCCTTTAAACCATCAGCCGGCCTTTTATATGGGTCTTCACTCTGACTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR TCA 90 bp TGGTTTAAAGGAAGTAACTACATGGAGTCTAATCGAGACATTCATGAGTTACATGGAACAAAGGGCTCCTaGGAGATGACGGTGTTTGGA +
Preference number: 4 (lower is better)
Translates to: WFKGSNYMESNRDIHELHGTKGS*EMTVFG
Trigger: TCCAAACACCGTCATCTCTCAGGAGCCCTTTGTTCC...ATGTAACTCATGAATGTCTCGATTAGACTCCATGTAGTTACTTCCTTTAAACCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR GCA 90 bp TACATGGAGTCTAATCGAGACATTCATGAGTTACATCTCATTATTAGCCTTAGTCTCAGCCTCCAGCTCTaGTGTACTTTTGCAGGTCAC +
Preference number: 4 (lower is better)
Translates to: YMESNRDIHELHLIISLSLSLQL*CTFAGH
Trigger: GTGACCTGCAAAAGTACAGCAGAGCTGGAGGCTGAG...ACTAAGGCTAATAATGAGATGTAACTCATGAATGTCTCGATTAGACTCCATGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR GCA 90 bp ACTACATGGAGTCTAATCGAGACATTCATGAGTTACATCTCATTATTAGCCTTAATGAGGCAAGGGAAGTaGCTTGAACTTGGGCACCTC +
Preference number: 4 (lower is better)
Translates to: TTWSLIETFMSYISLLALMRQGK*LELGHL
Trigger: GAGGTGCCCAAGTTCAAGGCACTTCCCTTGCCTCAT...TAAGGCTAATAATGAGATGTAACTCATGAATGTCTCGATTAGACTCCATGTAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR GCA 90 bp TCTAGTCAGAGTGAAGACCCATATAAAAGGCCGGCTGATGGTTTAAAGGAAGTACTTGCGTATTGGATTTaGCTTATGCACCAGTTCTCT +
Preference number: 4 (lower is better)
Translates to: SSQSEDPYKRPADGLKEVLAYWI*LMHQFS
Trigger: AGAGAACTGGTGCATAAGGCAAATCCAATACGCAAG...TACTTCCTTTAAACCATCAGCCGGCCTTTTATATGGGTCTTCACTCTGACTAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR GCA 90 bp ACTACATGGAGTCTAATCGAGACATTCATGAGTTACATCTCATTATTAGCCTTAAGTAAGGAAAGAACGTaGCTTAACGGCAGCCCCACC +
Preference number: 4 (lower is better)
Translates to: TTWSLIETFMSYISLLALSKERT*LNGSPT
Trigger: GGTGGGGCTGCCGTTAAGGCACGTTCTTTCCTTACT...TAAGGCTAATAATGAGATGTAACTCATGAATGTCTCGATTAGACTCCATGTAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR CCA 90 bp TTAAAGGAAGTAACTACATGGAGTCTAATCGAGACATTCATGAGTTACATCTCACCCGTGCACGGTGTTTaGTTTGCAGTACAGGAGTCT +
Preference number: 4 (lower is better)
Translates to: LKEVTTWSLIETFMSYISPVHGV*FAVQES
Trigger: AGACTCCTGTACTGCAAACCAAACACCGTGCACGGG...TGAGATGTAACTCATGAATGTCTCGATTAGACTCCATGTAGTTACTTCCTTTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR CCA 90 bp TACATGGAGTCTAATCGAGACATTCATGAGTTACATCTCATTATTAGCCTTAGTCCCGTGCACGGTGTTTaGTTTGCAGTACAGGAGTCT +
Preference number: 4 (lower is better)
Translates to: YMESNRDIHELHLIISLSPVHGV*FAVQES
Trigger: AGACTCCTGTACTGCAAACCAAACACCGTGCACGGG...ACTAAGGCTAATAATGAGATGTAACTCATGAATGTCTCGATTAGACTCCATGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR CCA 90 bp TACATGGAGTCTAATCGAGACATTCATGAGTTACATCTCATTATTAGCCTTAGTTCACAGGTGGTTTCTTaGGCAAGATGGGCCCACCTT +
Preference number: 4 (lower is better)
Translates to: YMESNRDIHELHLIISLSSQVVS*ARWAHL
Trigger: AAGGTGGGCCCATCTTGCCCAAGAAACCACCTGTGA...ACTAAGGCTAATAATGAGATGTAACTCATGAATGTCTCGATTAGACTCCATGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR CCA 90 bp TGGTTTAAAGGAAGTAACTACATGGAGTCTAATCGAGACATTCATGAGTTACATTCACAGGTGGTTTCTTaGGCAAGATGGGCCCACCTT +
Preference number: 4 (lower is better)
Translates to: WFKGSNYMESNRDIHELHSQVVS*ARWAHL
Trigger: AAGGTGGGCCCATCTTGCCCAAGAAACCACCTGTGA...ATGTAACTCATGAATGTCTCGATTAGACTCCATGTAGTTACTTCCTTTAAACCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR TCA 90 bp TCTAGTCAGAGTGAAGACCCATATAAAAGGCCGGCTGATGGTTTAAAGGAAGTAAGAGCTTTTAACTTGTaGCATTGTCTCCCACTTAAC +
Preference number: 4 (lower is better)
Translates to: SSQSEDPYKRPADGLKEVRAFNL*HCLPLN
Trigger: GTTAAGTGGGAGACAATGTCACAAGTTAAAAGCTCT...TACTTCCTTTAAACCATCAGCCGGCCTTTTATATGGGTCTTCACTCTGACTAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR TCA 90 bp TTAAAGGAAGTAACTACATGGAGTCTAATCGAGACATTCATGAGTTACATCTCAGAAGTGGAAGTCAACTaGTTTGGTGACCTGGCTCAC +
Preference number: 4 (lower is better)
Translates to: LKEVTTWSLIETFMSYISEVEVN*FGDLAH
Trigger: GTGAGCCAGGTCACCAAATCAGTTGACTTCCACTTC...TGAGATGTAACTCATGAATGTCTCGATTAGACTCCATGTAGTTACTTCCTTTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR GCA 90 bp ACTACATGGAGTCTAATCGAGACATTCATGAGTTACATCTCATTATTAGCCTTAGTGCTTCCAAGTCTGTaGCTTCAGAGCACCTCTTCT +
Preference number: 4 (lower is better)
Translates to: TTWSLIETFMSYISLLALVLPSL*LQSTSS
Trigger: AGAAGAGGTGCTCTGAAGGCACAGACTTGGAAGCAC...TAAGGCTAATAATGAGATGTAACTCATGAATGTCTCGATTAGACTCCATGTAGT
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR GCA 90 bp TACATGGAGTCTAATCGAGACATTCATGAGTTACATCTCATTATTAGCCTTAGTGTGCTTCCAAGTCTGTaGCTTCAGAGCACCTCTTCT +
Preference number: 4 (lower is better)
Translates to: YMESNRDIHELHLIISLSVLPSL*LQSTSS
Trigger: AGAAGAGGTGCTCTGAAGGCACAGACTTGGAAGCAC...ACTAAGGCTAATAATGAGATGTAACTCATGAATGTCTCGATTAGACTCCATGTA
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR GCA 90 bp TGGTTTAAAGGAAGTAACTACATGGAGTCTAATCGAGACATTCATGAGTTACATTCTTCTTCCAGCTGGTaGTTCCAAGTCTGTGCCTTC +
Preference number: 4 (lower is better)
Translates to: WFKGSNYMESNRDIHELHSSSSW*FQVCAF
Trigger: GAAGGCACAGACTTGGAAGCACCAGCTGGAAGAAGA...ATGTAACTCATGAATGTCTCGATTAGACTCCATGTAGTTACTTCCTTTAAACCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR CCA 90 bp TCTAGTCAGAGTGAAGACCCATATAAAAGGCCGGCTGATGGTTTAAAGGAAGTATTAGGGGTTCGTTTATaGAAGTCTTCAACTTGCTGT +
Preference number: 4 (lower is better)
Translates to: SSQSEDPYKRPADGLKEVLGVRL*KSSTCC
Trigger: ACAGCAAGTTGAAGACTTCCATAAACGAACCCCTAA...TACTTCCTTTAAACCATCAGCCGGCCTTTTATATGGGTCTTCACTCTGACTAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR CCA 90 bp TCTAGTCAGAGTGAAGACCCATATAAAAGGCCGGCTGATGGTTTAAAGGAAGTACTTTACCTTCTTCTCTaGCAGGTTAATGGTGTCAAA +
Preference number: 4 (lower is better)
Translates to: SSQSEDPYKRPADGLKEVLYLLL*QVNGVK
Trigger: TTTGACACCATTAACCTGCCAGAGAAGAAGGTAAAG...TACTTCCTTTAAACCATCAGCCGGCCTTTTATATGGGTCTTCACTCTGACTAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR CCA 90 bp ACTACATGGAGTCTAATCGAGACATTCATGAGTTACATCTCATTATTAGCCTTAAACTGCTGGGCTTTCTaGGCTTCTACCTCAGCCATT +
Preference number: 4 (lower is better)
Translates to: TTWSLIETFMSYISLLALNCWAF*ASTSAI
Trigger: AATGGCTGAGGTAGAAGCCCAGAAAGCCCAGCAGTT...TAAGGCTAATAATGAGATGTAACTCATGAATGTCTCGATTAGACTCCATGTAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR CCA 90 bp ACTACATGGAGTCTAATCGAGACATTCATGAGTTACATCTCATTATTAGCCTTAGGCACAGTCAGAGGCTaGTCACTTGACTTTATCTCC +
Preference number: 4 (lower is better)
Translates to: TTWSLIETFMSYISLLALGTVRG*SLDFIS
Trigger: GGAGATAAAGTCAAGTGACCAGCCTCTGACTGTGCC...TAAGGCTAATAATGAGATGTAACTCATGAATGTCTCGATTAGACTCCATGTAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR TCA 90 bp TGGTTTAAAGGAAGTAACTACATGGAGTCTAATCGAGACATTCATGAGTTACATTCAGGCCTACAGGTCTaGCTCAAAGTTGCAATCTTC +
Preference number: 4 (lower is better)
Translates to: WFKGSNYMESNRDIHELHSGLQV*LKVAIF
Trigger: GAAGATTGCAACTTTGAGTCAGACCTGTAGGCCTGA...ATGTAACTCATGAATGTCTCGATTAGACTCCATGTAGTTACTTCCTTTAAACCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR TCA 90 bp ACTACATGGAGTCTAATCGAGACATTCATGAGTTACATCTCATTATTAGCCTTAAAAGGAGTTTTGCCCTaGAAAAGCCCTCCAGTTCCA +
Preference number: 4 (lower is better)
Translates to: TTWSLIETFMSYISLLALKGVLP*KSPPVP
Trigger: TGGAACTGGAGGGCTTTTTCAGGGCAAAACTCCTTT...TAAGGCTAATAATGAGATGTAACTCATGAATGTCTCGATTAGACTCCATGTAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR TCA 90 bp ACTACATGGAGTCTAATCGAGACATTCATGAGTTACATCTCATTATTAGCCTTACTAAGAGATCTTCTCTaGGGCTGGGCTGGAGTTTTT +
Preference number: 4 (lower is better)
Translates to: TTWSLIETFMSYISLLALLRDLL*GWAGVF
Trigger: AAAAACTCCAGCCCAGCCTCAGAGAAGATCTCTTAG...TAAGGCTAATAATGAGATGTAACTCATGAATGTCTCGATTAGACTCCATGTAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR CCA 90 bp TCTAGTCAGAGTGAAGACCCATATAAAAGGCCGGCTGATGGTTTAAAGGAAGTAGAGTGGCACATCTCTTaGCTTTCATTTTTACATGAT +
Preference number: 4 (lower is better)
Translates to: SSQSEDPYKRPADGLKEVEWHIS*LSFLHD
Trigger: ATCATGTAAAAATGAAAGCCAAGAGATGTGCCACTC...TACTTCCTTTAAACCATCAGCCGGCCTTTTATATGGGTCTTCACTCTGACTAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR CCA 90 bp ACTACATGGAGTCTAATCGAGACATTCATGAGTTACATCTCATTATTAGCCTTACAGTATGTCTACCCTTaGCTTTCTCTGGGGAAGATG +
Preference number: 4 (lower is better)
Translates to: TTWSLIETFMSYISLLALQYVYP*LSLGKM
Trigger: CATCTTCCCCAGAGAAAGCCAAGGGTAGACATACTG...TAAGGCTAATAATGAGATGTAACTCATGAATGTCTCGATTAGACTCCATGTAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR CCA 90 bp TTAAAGGAAGTAACTACATGGAGTCTAATCGAGACATTCATGAGTTACATCTCAAATAGGCTCGGTGGGTaGTTTCACAGGTGGTTTCTT +
Preference number: 4 (lower is better)
Translates to: LKEVTTWSLIETFMSYISNRLGG*FHRWFL
Trigger: AAGAAACCACCTGTGAAACCACCCACCGAGCCTATT...TGAGATGTAACTCATGAATGTCTCGATTAGACTCCATGTAGTTACTTCCTTTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR CCA 90 bp TTAAAGGAAGTAACTACATGGAGTCTAATCGAGACATTCATGAGTTACATCTCACTTGGGGACGGTGATTaGAAGTACCTTCTTTTCAGG +
Preference number: 4 (lower is better)
Translates to: LKEVTTWSLIETFMSYISLGDGD*KYLLFR
Trigger: CCTGAAAAGAAGGTACTTCCAATCACCGTCCCCAAG...TGAGATGTAACTCATGAATGTCTCGATTAGACTCCATGTAGTTACTTCCTTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR CCA 90 bp TGGTTTAAAGGAAGTAACTACATGGAGTCTAATCGAGACATTCATGAGTTACATCTTGGGGACGGTGATTaGAAGTACCTTCTTTTCAGG +
Preference number: 4 (lower is better)
Translates to: WFKGSNYMESNRDIHELHLGDGD*KYLLFR
Trigger: CCTGAAAAGAAGGTACTTCCAATCACCGTCCCCAAG...ATGTAACTCATGAATGTCTCGATTAGACTCCATGTAGTTACTTCCTTTAAACCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR CCA 90 bp TACATGGAGTCTAATCGAGACATTCATGAGTTACATCTCATTATTAGCCTTAGTCACAGTTCTTGCCTCTaGGATTTGGGGCTTAAAAGG +
Preference number: 4 (lower is better)
Translates to: YMESNRDIHELHLIISLSHSSCL*DLGLKR
Trigger: CCTTTTAAGCCCCAAATCCCAGAGGCAAGAACTGTG...ACTAAGGCTAATAATGAGATGTAACTCATGAATGTCTCGATTAGACTCCATGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR CCA 90 bp TGGTTTAAAGGAAGTAACTACATGGAGTCTAATCGAGACATTCATGAGTTACATCACAGTTCTTGCCTCTaGGATTTGGGGCTTAAAAGG +
Preference number: 4 (lower is better)
Translates to: WFKGSNYMESNRDIHELHHSSCL*DLGLKR
Trigger: CCTTTTAAGCCCCAAATCCCAGAGGCAAGAACTGTG...ATGTAACTCATGAATGTCTCGATTAGACTCCATGTAGTTACTTCCTTTAAACCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR CCA 90 bp TACATGGAGTCTAATCGAGACATTCATGAGTTACATCTCATTATTAGCCTTAGTAGAGATGACGGTGTTTaGACGAGCCTTGAAACAAGC +
Preference number: 4 (lower is better)
Translates to: YMESNRDIHELHLIISLSRDDGV*TSLETS
Trigger: GCTTGTTTCAAGGCTCGTCCAAACACCGTCATCTCT...ACTAAGGCTAATAATGAGATGTAACTCATGAATGTCTCGATTAGACTCCATGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR CCA 90 bp TCTAGTCAGAGTGAAGACCCATATAAAAGGCCGGCTGATGGTTTAAAGGAAGTAAAGGAAGTAACTACATaGAGTCTAATCGAGACATTC +
Preference number: 4 (lower is better)
Translates to: SSQSEDPYKRPADGLKEVKEVTT*SLIETF
Trigger: GAATGTCTCGATTAGACTCCATGTAGTTACTTCCTT...TACTTCCTTTAAACCATCAGCCGGCCTTTTATATGGGTCTTCACTCTGACTAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR TCA 90 bp TGGTTTAAAGGAAGTAACTACATGGAGTCTAATCGAGACATTCATGAGTTACATGGAAGAACAAGCATTTaGCGGAATGGATTGTTCCAC +
Preference number: 4 (lower is better)
Translates to: WFKGSNYMESNRDIHELHGRTSI*RNGLFH
Trigger: GTGGAACAATCCATTCCGTCAAATGCTTGTTCTTCC...ATGTAACTCATGAATGTCTCGATTAGACTCCATGTAGTTACTTCCTTTAAACCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR TCA 90 bp TGGTTTAAAGGAAGTAACTACATGGAGTCTAATCGAGACATTCATGAGTTACATTGTTTGGACGAGCCTTaGAACAAGCTGCTTCTTTCT +
Preference number: 4 (lower is better)
Translates to: WFKGSNYMESNRDIHELHCLDEP*NKLLLS
Trigger: AGAAAGAAGCAGCTTGTTTCAAGGCTCGTCCAAACA...ATGTAACTCATGAATGTCTCGATTAGACTCCATGTAGTTACTTCCTTTAAACCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR TCA 90 bp TACATGGAGTCTAATCGAGACATTCATGAGTTACATCTCATTATTAGCCTTAGTTGTTTGGACGAGCCTTaGAACAAGCTGCTTCTTTCT +
Preference number: 4 (lower is better)
Translates to: YMESNRDIHELHLIISLSCLDEP*NKLLLS
Trigger: AGAAAGAAGCAGCTTGTTTCAAGGCTCGTCCAAACA...ACTAAGGCTAATAATGAGATGTAACTCATGAATGTCTCGATTAGACTCCATGTA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR GCA 90 bp TACATGGAGTCTAATCGAGACATTCATGAGTTACATCTCATTATTAGCCTTAGTTTCTCAAAGGAGTTTTaGCCTGAAAAAGCCCTCCAG +
Preference number: 4 (lower is better)
Translates to: YMESNRDIHELHLIISLSFSKEF*PEKALQ
Trigger: CTGGAGGGCTTTTTCAGGGCAAAACTCCTTTGAGAA...ACTAAGGCTAATAATGAGATGTAACTCATGAATGTCTCGATTAGACTCCATGTA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR GCA 90 bp TGGTTTAAAGGAAGTAACTACATGGAGTCTAATCGAGACATTCATGAGTTACATGTCTTCAACTTGCTGTaGAAGGGGCACATATGTAGA +
Preference number: 4 (lower is better)
Translates to: WFKGSNYMESNRDIHELHVFNLL*KGHICR
Trigger: TCTACATATGTGCCCCTTGCACAGCAAGTTGAAGAC...ATGTAACTCATGAATGTCTCGATTAGACTCCATGTAGTTACTTCCTTTAAACCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR GCA 90 bp TGGTTTAAAGGAAGTAACTACATGGAGTCTAATCGAGACATTCATGAGTTACATTGGAAGTCTTCAACTTaGTGTGCAAGGGGCACATAT +
Preference number: 4 (lower is better)
Translates to: WFKGSNYMESNRDIHELHWKSST*CARGTY
Trigger: ATATGTGCCCCTTGCACAGCAAGTTGAAGACTTCCA...ATGTAACTCATGAATGTCTCGATTAGACTCCATGTAGTTACTTCCTTTAAACCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR GCA 90 bp TACATGGAGTCTAATCGAGACATTCATGAGTTACATCTCATTATTAGCCTTAGTCCAGACCCTGGTACTTaGGTATTGGATTTGCCTTAT +
Preference number: 4 (lower is better)
Translates to: YMESNRDIHELHLIISLSPDPGT*VLDLPY
Trigger: ATAAGGCAAATCCAATACGCAAGTACCAGGGTCTGG...ACTAAGGCTAATAATGAGATGTAACTCATGAATGTCTCGATTAGACTCCATGTA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR GCA 90 bp TACATGGAGTCTAATCGAGACATTCATGAGTTACATCTCATTATTAGCCTTAGTAATGGGTTCTCTCCATaGCCAATGACAAAGCAAGAC +
Preference number: 4 (lower is better)
Translates to: YMESNRDIHELHLIISLSNGFSP*PMTKQD
Trigger: GTCTTGCTTTGTCATTGGGCATGGAGAGAACCCATT...ACTAAGGCTAATAATGAGATGTAACTCATGAATGTCTCGATTAGACTCCATGTA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR CCA 90 bp TCTAGTCAGAGTGAAGACCCATATAAAAGGCCGGCTGATGGTTTAAAGGAAGTAAAGCATTTGACGGAATaGATTGTTCCACAAGATTTT +
Preference number: 4 (lower is better)
Translates to: SSQSEDPYKRPADGLKEVKHLTE*IVPQDF
Trigger: AAAATCTTGTGGAACAATCCATTCCGTCAAATGCTT...TACTTCCTTTAAACCATCAGCCGGCCTTTTATATGGGTCTTCACTCTGACTAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR CCA 90 bp TACATGGAGTCTAATCGAGACATTCATGAGTTACATCTCATTATTAGCCTTAGTGAGTTTTTCTTGATATaGCTGCCTCAACTTCCAGGG +
Preference number: 4 (lower is better)
Translates to: YMESNRDIHELHLIISLSEFFLI*LPQLPG
Trigger: CCCTGGAAGTTGAGGCAGCCATATCAAGAAAAACTC...ACTAAGGCTAATAATGAGATGTAACTCATGAATGTCTCGATTAGACTCCATGTA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR CCA 90 bp ACTACATGGAGTCTAATCGAGACATTCATGAGTTACATCTCATTATTAGCCTTAGAGTTTTTCTTGATATaGCTGCCTCAACTTCCAGGG +
Preference number: 4 (lower is better)
Translates to: TTWSLIETFMSYISLLALEFFLI*LPQLPG
Trigger: CCCTGGAAGTTGAGGCAGCCATATCAAGAAAAACTC...TAAGGCTAATAATGAGATGTAACTCATGAATGTCTCGATTAGACTCCATGTAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR CCA 90 bp TTAAAGGAAGTAACTACATGGAGTCTAATCGAGACATTCATGAGTTACATCTCATCATCTGTGCGGAAGTaGAAGTCAACTGATTTGGTG +
Preference number: 4 (lower is better)
Translates to: LKEVTTWSLIETFMSYISSSVRK*KSTDLV
Trigger: CACCAAATCAGTTGACTTCCACTTCCGCACAGATGA...TGAGATGTAACTCATGAATGTCTCGATTAGACTCCATGTAGTTACTTCCTTTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR CCA 90 bp TTAAAGGAAGTAACTACATGGAGTCTAATCGAGACATTCATGAGTTACATCTCAGGTCTCTGCAAATCTTaGTCACAGAAGATTTGGAGG +
Preference number: 4 (lower is better)
Translates to: LKEVTTWSLIETFMSYISGLCKS*SQKIWR
Trigger: CCTCCAAATCTTCTGTGACCAAGATTTGCAGAGACC...TGAGATGTAACTCATGAATGTCTCGATTAGACTCCATGTAGTTACTTCCTTTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR CCA 90 bp TGGTTTAAAGGAAGTAACTACATGGAGTCTAATCGAGACATTCATGAGTTACATAGGCACCCCATAATGTaGCACAGGTTGAGCTTTTAT +
Preference number: 4 (lower is better)
Translates to: WFKGSNYMESNRDIHELHRHPIM*HRLSFY
Trigger: ATAAAAGCTCAACCTGTGCCACATTATGGGGTGCCT...ATGTAACTCATGAATGTCTCGATTAGACTCCATGTAGTTACTTCCTTTAAACCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR CCA 90 bp ACTACATGGAGTCTAATCGAGACATTCATGAGTTACATCTCATTATTAGCCTTAAGGCACCCCATAATGTaGCACAGGTTGAGCTTTTAT +
Preference number: 4 (lower is better)
Translates to: TTWSLIETFMSYISLLALRHPIM*HRLSFY
Trigger: ATAAAAGCTCAACCTGTGCCACATTATGGGGTGCCT...TAAGGCTAATAATGAGATGTAACTCATGAATGTCTCGATTAGACTCCATGTAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR CCA 90 bp ACTACATGGAGTCTAATCGAGACATTCATGAGTTACATCTCATTATTAGCCTTAATCGAGTGGAGAATTTaGGAGATACAGGCACAGTCA +
Preference number: 4 (lower is better)
Translates to: TTWSLIETFMSYISLLALIEWRI*EIQAQS
Trigger: TGACTGTGCCTGTATCTCCCAAATTCTCCACTCGAT...TAAGGCTAATAATGAGATGTAACTCATGAATGTCTCGATTAGACTCCATGTAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR TCA 90 bp TGGTTTAAAGGAAGTAACTACATGGAGTCTAATCGAGACATTCATGAGTTACATCTTTCACCCCTTTTCTaGAATCTTGAAGTCTGGCAA +
Preference number: 4 (lower is better)
Translates to: WFKGSNYMESNRDIHELHLSPLF*NLEVWQ
Trigger: TTGCCAGACTTCAAGATTTCAGAAAAGGGGTGAAAG...ATGTAACTCATGAATGTCTCGATTAGACTCCATGTAGTTACTTCCTTTAAACCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR TCA 90 bp TGGTTTAAAGGAAGTAACTACATGGAGTCTAATCGAGACATTCATGAGTTACATTTCTTGCTCCTCAAATaGTATCTGTTAGGGGTTCGT +
Preference number: 4 (lower is better)
Translates to: WFKGSNYMESNRDIHELHFLLLK*YLLGVR
Trigger: ACGAACCCCTAACAGATATCATTTGAGGAGCAAGAA...ATGTAACTCATGAATGTCTCGATTAGACTCCATGTAGTTACTTCCTTTAAACCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR TCA 90 bp TACATGGAGTCTAATCGAGACATTCATGAGTTACATCTCATTATTAGCCTTAGTTTCTCCTTCTGTAACTaGCGTTCTTTGTCTCGAGAA +
Preference number: 4 (lower is better)
Translates to: YMESNRDIHELHLIISLSFSFCN*RSLSRE
Trigger: TTCTCGAGACAAAGAACGTCAGTTACAGAAGGAGAA...ACTAAGGCTAATAATGAGATGTAACTCATGAATGTCTCGATTAGACTCCATGTA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR GCA 90 bp ACTACATGGAGTCTAATCGAGACATTCATGAGTTACATCTCATTATTAGCCTTACTCTTCTCCAGCTCTTaGTCCTCAGTACTTTTTAGA +
Preference number: 4 (lower is better)
Translates to: TTWSLIETFMSYISLLALLFSSS*SSVLFR
Trigger: TCTAAAAAGTACTGAGGAGCAAGAGCTGGAGAAGAG...TAAGGCTAATAATGAGATGTAACTCATGAATGTCTCGATTAGACTCCATGTAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR GCA 90 bp ACTACATGGAGTCTAATCGAGACATTCATGAGTTACATCTCATTATTAGCCTTAATCTCCACCACCTCTTaGTGCATTTTCATACTCTTC +
Preference number: 4 (lower is better)
Translates to: TTWSLIETFMSYISLLALISTTS*CIFILF
Trigger: GAAGAGTATGAAAATGCAGCAAGAGGTGGTGGAGAT...TAAGGCTAATAATGAGATGTAACTCATGAATGTCTCGATTAGACTCCATGTAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR GCA 90 bp TTAAAGGAAGTAACTACATGGAGTCTAATCGAGACATTCATGAGTTACATCTCACTTGCGTATTGGATTTaGCTTATGCACCAGTTCTCT +
Preference number: 4 (lower is better)
Translates to: LKEVTTWSLIETFMSYISLAYWI*LMHQFS
Trigger: AGAGAACTGGTGCATAAGGCAAATCCAATACGCAAG...TGAGATGTAACTCATGAATGTCTCGATTAGACTCCATGTAGTTACTTCCTTTAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR CCA 90 bp TTAAAGGAAGTAACTACATGGAGTCTAATCGAGACATTCATGAGTTACATCTCAACTGATTTGGTGACCTaGCTCACTGATTTCTTCACA +
Preference number: 4 (lower is better)
Translates to: LKEVTTWSLIETFMSYISTDLVT*LTDFFT
Trigger: TGTGAAGAAATCAGTGAGCCAGGTCACCAAATCAGT...TGAGATGTAACTCATGAATGTCTCGATTAGACTCCATGTAGTTACTTCCTTTAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR CCA 90 bp TACATGGAGTCTAATCGAGACATTCATGAGTTACATCTCATTATTAGCCTTAGTCACCTTCAAGTATTCTaGGATCAAGTTCACGTGCTT +
Preference number: 4 (lower is better)
Translates to: YMESNRDIHELHLIISLSHLQVF*DQVHVL
Trigger: AAGCACGTGAACTTGATCCCAGAATACTTGAAGGTG...ACTAAGGCTAATAATGAGATGTAACTCATGAATGTCTCGATTAGACTCCATGTA
38% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR CCA 90 bp TGGTTTAAAGGAAGTAACTACATGGAGTCTAATCGAGACATTCATGAGTTACATCTTCCTCATCTTCTTTaGTGGGCATTCGAATTCTGT +
Preference number: 4 (lower is better)
Translates to: WFKGSNYMESNRDIHELHLPHLL*WAFEFC
Trigger: ACAGAATTCGAATGCCCACCAAAGAAGATGAGGAAG...ATGTAACTCATGAATGTCTCGATTAGACTCCATGTAGTTACTTCCTTTAAACCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR CCA 90 bp TTAAAGGAAGTAACTACATGGAGTCTAATCGAGACATTCATGAGTTACATCTCAAAAAGTCTGGAGAAATaGGTTCTCTCCATGCCCAAT +
Preference number: 4 (lower is better)
Translates to: LKEVTTWSLIETFMSYISKSLEK*VLSMPN
Trigger: ATTGGGCATGGAGAGAACCCATTTCTCCAGACTTTT...TGAGATGTAACTCATGAATGTCTCGATTAGACTCCATGTAGTTACTTCCTTTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR CCA 90 bp TTAAAGGAAGTAACTACATGGAGTCTAATCGAGACATTCATGAGTTACATCTCATTAGGGGTTCGTTTATaGAAGTCTTCAACTTGCTGT +
Preference number: 4 (lower is better)
Translates to: LKEVTTWSLIETFMSYISLGVRL*KSSTCC
Trigger: ACAGCAAGTTGAAGACTTCCATAAACGAACCCCTAA...TGAGATGTAACTCATGAATGTCTCGATTAGACTCCATGTAGTTACTTCCTTTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR CCA 90 bp TTAAAGGAAGTAACTACATGGAGTCTAATCGAGACATTCATGAGTTACATCTCACTTTACCTTCTTCTCTaGCAGGTTAATGGTGTCAAA +
Preference number: 4 (lower is better)
Translates to: LKEVTTWSLIETFMSYISLYLLL*QVNGVK
Trigger: TTTGACACCATTAACCTGCCAGAGAAGAAGGTAAAG...TGAGATGTAACTCATGAATGTCTCGATTAGACTCCATGTAGTTACTTCCTTTAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR CCA 90 bp TACATGGAGTCTAATCGAGACATTCATGAGTTACATCTCATTATTAGCCTTAGTTTTATCTCCAGACCCTaGTACTTGCGTATTGGATTT +
Preference number: 4 (lower is better)
Translates to: YMESNRDIHELHLIISLSFISRP*YLRIGF
Trigger: AAATCCAATACGCAAGTACCAGGGTCTGGAGATAAA...ACTAAGGCTAATAATGAGATGTAACTCATGAATGTCTCGATTAGACTCCATGTA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR TCA 90 bp ACTACATGGAGTCTAATCGAGACATTCATGAGTTACATCTCATTATTAGCCTTACATGAATCTATGTTTTaGGTATCTCCTTCATCATCC +
Preference number: 4 (lower is better)
Translates to: TTWSLIETFMSYISLLALHESMF*VSPSSS
Trigger: GGATGATGAAGGAGATACTCAAAACATAGATTCATG...TAAGGCTAATAATGAGATGTAACTCATGAATGTCTCGATTAGACTCCATGTAGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR TCA 90 bp TACATGGAGTCTAATCGAGACATTCATGAGTTACATCTCATTATTAGCCTTAGTCATGAATCTATGTTTTaGGTATCTCCTTCATCATCC +
Preference number: 4 (lower is better)
Translates to: YMESNRDIHELHLIISLSHESMF*VSPSSS
Trigger: GGATGATGAAGGAGATACTCAAAACATAGATTCATG...ACTAAGGCTAATAATGAGATGTAACTCATGAATGTCTCGATTAGACTCCATGTA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR TCA 90 bp TTAAAGGAAGTAACTACATGGAGTCTAATCGAGACATTCATGAGTTACATCTCACCAGAGCAAGTTTCTTaGATTCTTCATTCTTTTTCC +
Preference number: 4 (lower is better)
Translates to: LKEVTTWSLIETFMSYISPEQVS*ILHSFS
Trigger: GGAAAAAGAATGAAGAATTCAAGAAACTTGCTCTGG...TGAGATGTAACTCATGAATGTCTCGATTAGACTCCATGTAGTTACTTCCTTTAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR TCA 90 bp TACATGGAGTCTAATCGAGACATTCATGAGTTACATCTCATTATTAGCCTTAGTCCAGAGCAAGTTTCTTaGATTCTTCATTCTTTTTCC +
Preference number: 4 (lower is better)
Translates to: YMESNRDIHELHLIISLSPEQVS*ILHSFS
Trigger: GGAAAAAGAATGAAGAATTCAAGAAACTTGCTCTGG...ACTAAGGCTAATAATGAGATGTAACTCATGAATGTCTCGATTAGACTCCATGTA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR CCA 90 bp TTAAAGGAAGTAACTACATGGAGTCTAATCGAGACATTCATGAGTTACATCTCAGTAAGTGTTGTCAACTaGTTTCAAAGGTGTGACAAT +
Preference number: 4 (lower is better)
Translates to: LKEVTTWSLIETFMSYISVSVVN*FQRCDN
Trigger: ATTGTCACACCTTTGAAACCAGTTGACAACACTTAC...TGAGATGTAACTCATGAATGTCTCGATTAGACTCCATGTAGTTACTTCCTTTAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR CCA 90 bp TTAAAGGAAGTAACTACATGGAGTCTAATCGAGACATTCATGAGTTACATCTCATTTGATTCTCGCTCCTaGATTCTTTTCTCAATTTCC +
Preference number: 4 (lower is better)
Translates to: LKEVTTWSLIETFMSYISFDSRS*ILFSIS
Trigger: GGAAATTGAGAAAAGAATCCAGGAGCGAGAATCAAA...TGAGATGTAACTCATGAATGTCTCGATTAGACTCCATGTAGTTACTTCCTTTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR CCA 90 bp TTAAAGGAAGTAACTACATGGAGTCTAATCGAGACATTCATGAGTTACATCTCAAAGGAAGTAACTACATaGAGTCTAATCGAGACATTC +
Preference number: 4 (lower is better)
Translates to: LKEVTTWSLIETFMSYISKEVTT*SLIETF
Trigger: GAATGTCTCGATTAGACTCCATGTAGTTACTTCCTT...TGAGATGTAACTCATGAATGTCTCGATTAGACTCCATGTAGTTACTTCCTTTAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR GCA 90 bp TGGTTTAAAGGAAGTAACTACATGGAGTCTAATCGAGACATTCATGAGTTACATTTGAATTTGTATTGTTaGAATTTCTCGAGCTCCTCA +
Preference number: 4 (lower is better)
Translates to: WFKGSNYMESNRDIHELHLNLYC*NFSSSS
Trigger: TGAGGAGCTCGAGAAATTGCAACAATACAAATTCAA...ATGTAACTCATGAATGTCTCGATTAGACTCCATGTAGTTACTTCCTTTAAACCA
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR CCA 90 bp TACATGGAGTCTAATCGAGACATTCATGAGTTACATCTCATTATTAGCCTTAGTAAGCATTTGACGGAATaGATTGTTCCACAAGATTTT +
Preference number: 4 (lower is better)
Translates to: YMESNRDIHELHLIISLSKHLTE*IVPQDF
Trigger: AAAATCTTGTGGAACAATCCATTCCGTCAAATGCTT...ACTAAGGCTAATAATGAGATGTAACTCATGAATGTCTCGATTAGACTCCATGTA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS TCA 90 bp CAGAAGCCAGGCCTAGCGGCGCGAACGGCGCTAGGGGCTGGAAGGTaGACTTCAGCCGTTCCAAACTCCGGGAGGAGGGAGACCCGCGCC +
Preference number: 5 (lower is better)
Translates to: QKPGLAARTALGAGR*TSAVPNSGRRETRA
Trigger: GGCGCGGGTCTCCCTCCTCCCGGAGTTTGGAACGGCTGAAGTTCACCTTCCAGCCCCTAGCGCCGTTCGCGCCGCTAGGCCTGGCTTCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS CCA 90 bp ACCGCCTCAGAAGCCAGGCCTAGCGGCGCGAACGGCGCTAGGGGCTaGAAGGTGAACTTCAGCCGTTCCAAACTCCGGGAGGAGGGAGAC +
Preference number: 5 (lower is better)
Translates to: TASEARPSGANGARG*KVNFSRSKLREEGD
Trigger: GTCTCCCTCCTCCCGGAGTTTGGAACGGCTGAAGTTCACCTTCCAGCCCCTAGCGCCGTTCGCGCCGCTAGGCCTGGCTTCTGAGGCGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS GCA 90 bp TTCAGCCGTTCCAAACTCCGGGAGGAGGGAGACCCGCGCCCTAGCTaGTCCCTCTTTTCTTCCCACGGCTCACCTAGCCTCGCCTCAGAT +
Preference number: 5 (lower is better)
Translates to: FSRSKLREEGDPRPS*SLFSSHGSPSLASD
Trigger: ATCTGAGGCGAGGCTAGGTGAGCCGTGGGAAGAAAAGAGGGAGCAGCTAGGGCGCGGGTCTCCCTCCTCCCGGAGTTTGGAACGGCTGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS TCA 90 bp GCTCCCTCTTTTCTTCCCACGGCTCACCTAGCCTCGCCTCAGATCTaGCAACGAAGCGCGAGCCAACCCGCCGCGGGACTCATTCAGTAT +
Preference number: 5 (lower is better)
Translates to: APSFLPTAHLASPQI*QRSASQPAAGLIQY
Trigger: ATACTGAATGAGTCCCGCGGCGGGTTGGCTCGCGCTTCGTTGTCAGATCTGAGGCGAGGCTAGGTGAGCCGTGGGAAGAAAAGAGGGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340513.4
CDS-3UTR CAA 90 bp TTGAGGTTAAGAGCAGGTCCCATTGCCGGGCGGTATCCGCAGCTCACAGCTGAGGCAAAGGCTGGTGACTaGGGGACGGTGATTGGAAGT +
Preference number: 5 (lower is better)
Translates to: LRLRAGPIAGRYPQLTAEAKAGD*GTVIGS
Trigger: ACTTCCAATCACCGTCCCCAAGTCACCAGCCTTTGC...CTCAGCTGTGAGCTGCGGATACCGCCCGGCAATGGGACCTGCTCTTAACCTCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS GCA 90 bp CTCCTCAGCCTCCAGCTCTGCTGTACTTTTGCAGGTCACAGCCCGTaGACGGTGTTTGGTTTGCAGTACAGGAGTCTGTGGGTCTCTGCA +
Preference number: 5 (lower is better)
Translates to: LLSLQLCCTFAGHSP*TVFGLQYRSLWVSA
Trigger: TGCAGAGACCCACAGACTCCTGTACTGCAAACCAAACACCGTGCACGGGCTGTGACCTGCAAAAGTACAGCAGAGCTGGAGGCTGAGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR CAA 90 bp GTTATCAGCACCAGTAAGGAAAGAACGTGCCTTAACGGCAGCCCCACCCAGAGCAGCTCCTGCCGCTCTTaGGCTCTCTTCTCAGTAGCC +
Preference number: 5 (lower is better)
Translates to: VISTSKERTCLNGSPTQSSSCRS*ALFSVA
Trigger: GGCTACTGAGAAGAGAGCCAAAGAGCGGCAGGAGCT...GCTCTGGGTGGGGCTGCCGTTAAGGCACGTTCTTTCCTTACTGGTGCTGATAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS CCA 90 bp GGGCGGTATCCGCAGCTCACAGCTGAGTTTAGCAGTGGAATCGAGTaGAGAATTTGGGAGATACAGGCACAGTCAGAGGCTGGTCACTTG +
Preference number: 5 (lower is better)
Translates to: GRYPQLTAEFSSGIE*RIWEIQAQSEAGHL
Trigger: CAAGTGACCAGCCTCTGACTGTGCCTGTATCTCCCAAATTCTCCACTCGATTCCACTGCTAAACTCAGCTGTGAGCTGCGGATACCGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR CAA 90 bp CACGGTTCCCTGTTGTTATCAGCACCAGTAAGGAAAGAACGTGCCTTAACGGCAGGCAAGGGAAGTGCCTaGAACTTGGGCACCTCCCCT +
Preference number: 5 (lower is better)
Translates to: HGSLLLSAPVRKERALTAGKGSA*NLGTSP
Trigger: AGGGGAGGTGCCCAAGTTCAAGGCACTTCCCTTGCC...TGCCGTTAAGGCACGTTCTTTCCTTACTGGTGCTGATAACAACAGGGAACCGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR CAA 90 bp GTTATCAGCACCAGTAAGGAAAGAACGTGCCTTAACGGCAGCCCCACCCAGAGCAAGACGGTCCTAGGTTaGAGGTTAAGAGCAGGTCCC +
Preference number: 5 (lower is better)
Translates to: VISTSKERTCLNGSPTQSKTVLG*RLRAGP
Trigger: GGGACCTGCTCTTAACCTCAAACCTAGGACCGTCTT...GCTCTGGGTGGGGCTGCCGTTAAGGCACGTTCTTTCCTTACTGGTGCTGATAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR CAA 90 bp GTTATCAGCACCAGTAAGGAAAGAACGTGCCTTAACGGCAGCCCCACCCAGAGCCTGCACGGTTCCCTGTaGTTATCAGCACCAGTAAGG +
Preference number: 5 (lower is better)
Translates to: VISTSKERTCLNGSPTQSLHGSL*LSAPVR
Trigger: CCTTACTGGTGCTGATAACAACAGGGAACCGTGCAG...GCTCTGGGTGGGGCTGCCGTTAAGGCACGTTCTTTCCTTACTGGTGCTGATAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS CCA 90 bp CCAGCTCTGCTGTACTTTTGCAGGTCACAGCCCGTGCACGGTGTTTaGTTTGCAGTACAGGAGTCTGTGGGTCTCTGCAAATCTTGGTCA +
Preference number: 5 (lower is better)
Translates to: PALLYFCRSQPVHGV*FAVQESVGLCKSWS
Trigger: TGACCAAGATTTGCAGAGACCCACAGACTCCTGTACTGCAAACCAAACACCGTGCACGGGCTGTGACCTGCAAAAGTACAGCAGAGCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR CAA 90 bp TTGAGGTTAAGAGCAGGTCCCATTGCCGGGCGGTATCCGCAGCTCACAGCTGAGCTTTTCAGCAGTATCTaGATGAGCACTGCCTTCTTC +
Preference number: 5 (lower is better)
Translates to: LRLRAGPIAGRYPQLTAELFSSI*MSTAFF
Trigger: GAAGAAGGCAGTGCTCATCAAGATACTGCTGAAAAG...CTCAGCTGTGAGCTGCGGATACCGCCCGGCAATGGGACCTGCTCTTAACCTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR CAA 90 bp GTTATCAGCACCAGTAAGGAAAGAACGTGCCTTAACGGCAGCCCCACCCAGAGCTCAGAGGCTGGTCACTaGACTTTATCTCCAGACCCT +
Preference number: 5 (lower is better)
Translates to: VISTSKERTCLNGSPTQSSEAGH*TLSPDP
Trigger: AGGGTCTGGAGATAAAGTCAAGTGACCAGCCTCTGA...GCTCTGGGTGGGGCTGCCGTTAAGGCACGTTCTTTCCTTACTGGTGCTGATAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR CAA 90 bp TTGAGGTTAAGAGCAGGTCCCATTGCCGGGCGGTATCCGCAGCTCACAGCTGAGGGTTTTTCCCAGTATTaGTACCACTTTTCTCAGCAG +
Preference number: 5 (lower is better)
Translates to: LRLRAGPIAGRYPQLTAEGFSQY*YHFSQQ
Trigger: CTGCTGAGAAAAGTGGTACAAATACTGGGAAAAACC...CTCAGCTGTGAGCTGCGGATACCGCCCGGCAATGGGACCTGCTCTTAACCTCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR CAA 90 bp TTGAGGTTAAGAGCAGGTCCCATTGCCGGGCGGTATCCGCAGCTCACAGCTGAGCTGGTTCTTAGGATGTaGTTTGATTCGCTCATCTGT +
Preference number: 5 (lower is better)
Translates to: LRLRAGPIAGRYPQLTAELVLRM*FDSLIC
Trigger: ACAGATGAGCGAATCAAACAACATCCTAAGAACCAG...CTCAGCTGTGAGCTGCGGATACCGCCCGGCAATGGGACCTGCTCTTAACCTCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR CAA 90 bp TTGAGGTTAAGAGCAGGTCCCATTGCCGGGCGGTATCCGCAGCTCACAGCTGAGTGTTCTTTTCTTTCCTaGGGACAGGTTGAAAGGCTT +
Preference number: 5 (lower is better)
Translates to: LRLRAGPIAGRYPQLTAECSFLS*GQVERL
Trigger: AAGCCTTTCAACCTGTCCCAAGGAAAGAAAAGAACA...CTCAGCTGTGAGCTGCGGATACCGCCCGGCAATGGGACCTGCTCTTAACCTCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR CAA 90 bp CACGGTTCCCTGTTGTTATCAGCACCAGTAAGGAAAGAACGTGCCTTAACGGCAGCAAAGGCTGGTGACTaGGGGACGGTGATTGGAAGT +
Preference number: 5 (lower is better)
Translates to: HGSLLLSAPVRKERALTAAKAGD*GTVIGS
Trigger: ACTTCCAATCACCGTCCCCAAGTCACCAGCCTTTGC...TGCCGTTAAGGCACGTTCTTTCCTTACTGGTGCTGATAACAACAGGGAACCGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR CAA 90 bp GTTATCAGCACCAGTAAGGAAAGAACGTGCCTTAACGGCAGCCCCACCCAGAGCCCTGGTACTTGCGTATaGGATTTGCCTTATGCACCA +
Preference number: 5 (lower is better)
Translates to: VISTSKERTCLNGSPTQSPGTCV*DLPYAP
Trigger: TGGTGCATAAGGCAAATCCAATACGCAAGTACCAGG...GCTCTGGGTGGGGCTGCCGTTAAGGCACGTTCTTTCCTTACTGGTGCTGATAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS GCA 90 bp TCTGCTGTACTTTTGCAGGTCACAGCCCGTGCACGGTGTTTGGTTTaGAGTACAGGAGTCTGTGGGTCTCTGCAAATCTTGGTCACAGAA +
Preference number: 5 (lower is better)
Translates to: SAVLLQVTARARCLV*STGVCGSLQILVTE
Trigger: TTCTGTGACCAAGATTTGCAGAGACCCACAGACTCCTGTACTGCAAACCAAACACCGTGCACGGGCTGTGACCTGCAAAAGTACAGCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS GCA 90 bp CAGTCAGAGGCTGGTCACTTGACTTTATCTCCAGACCCTGGTACTTaGGTATTGGATTTGCCTTATGCACCAGTTCTCTCCGTAGCCTGG +
Preference number: 5 (lower is better)
Translates to: QSEAGHLTLSPDPGT*VLDLPYAPVLSVAW
Trigger: CCAGGCTACGGAGAGAACTGGTGCATAAGGCAAATCCAATACGCAAGTACCAGGGTCTGGAGATAAAGTCAAGTGACCAGCCTCTGACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR CAA 90 bp TTGAGGTTAAGAGCAGGTCCCATTGCCGGGCGGTATCCGCAGCTCACAGCTGAGAACTTATTCTCCAAATaGGCCTTCTCCTCAAACCAT +
Preference number: 5 (lower is better)
Translates to: LRLRAGPIAGRYPQLTAENLFSK*AFSSNH
Trigger: ATGGTTTGAGGAGAAGGCCAATTTGGAGAATAAGTT...CTCAGCTGTGAGCTGCGGATACCGCCCGGCAATGGGACCTGCTCTTAACCTCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS GCA 90 bp GAATTTGTATTGTTGCAATTTCTCGAGCTCCTCAGCCTCCAGCTCTaGTGTACTTTTGCAGGTCACAGCCCGTGCACGGTGTTTGGTTTG +
Preference number: 5 (lower is better)
Translates to: EFVLLQFLELLSLQL*CTFAGHSPCTVFGL
Trigger: CAAACCAAACACCGTGCACGGGCTGTGACCTGCAAAAGTACAGCAGAGCTGGAGGCTGAGGAGCTCGAGAAATTGCAACAATACAAATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS GCA 90 bp CCCGTGCACGGTGTTTGGTTTGCAGTACAGGAGTCTGTGGGTCTCTaGAAATCTTGGTCACAGAAGATTTGGAGGGTAACAGGTTTGGAA +
Preference number: 5 (lower is better)
Translates to: PVHGVWFAVQESVGL*KSWSQKIWRVTGLE
Trigger: TTCCAAACCTGTTACCCTCCAAATCTTCTGTGACCAAGATTTGCAGAGACCCACAGACTCCTGTACTGCAAACCAAACACCGTGCACGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340513.4
CDS CCA 90 bp ATTCGCTCATCTGTGCGGAAGTGGAAGTCAACTGATTTGGTGACCTaGCTCACTGATTTCTTCACAGGTTGCCCTATTCCAGCCAGAGCA +
Preference number: 5 (lower is better)
Translates to: IRSSVRKWKSTDLVT*LTDFFTGCPIPARA
Trigger: TGCTCTGGCTGGAATAGGGCAACCTGTGAAGAAATCAGTGAGCCAGGTCACCAAATCAGTTGACTTCCACTTCCGCACAGATGAGCGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS CCA 90 bp ACAGGCACAGTCAGAGGCTGGTCACTTGACTTTATCTCCAGACCCTaGTACTTGCGTATTGGATTTGCCTTATGCACCAGTTCTCTCCGT +
Preference number: 5 (lower is better)
Translates to: TGTVRGWSLDFISRP*YLRIGFALCTSSLR
Trigger: ACGGAGAGAACTGGTGCATAAGGCAAATCCAATACGCAAGTACCAGGGTCTGGAGATAAAGTCAAGTGACCAGCCTCTGACTGTGCCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS CCA 90 bp CCGCAGCTCACAGCTGAGTTTAGCAGTGGAATCGAGTGGAGAATTTaGGAGATACAGGCACAGTCAGAGGCTGGTCACTTGACTTTATCT +
Preference number: 5 (lower is better)
Translates to: PQLTAEFSSGIEWRI*EIQAQSEAGHLTLS
Trigger: AGATAAAGTCAAGTGACCAGCCTCTGACTGTGCCTGTATCTCCCAAATTCTCCACTCGATTCCACTGCTAAACTCAGCTGTGAGCTGCGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR CAA 90 bp GTTATCAGCACCAGTAAGGAAAGAACGTGCCTTAACGGCAGCCCCACCCAGAGCCTGGTTCTTAGGATGTaGTTTGATTCGCTCATCTGT +
Preference number: 5 (lower is better)
Translates to: VISTSKERTCLNGSPTQSLVLRM*FDSLIC
Trigger: ACAGATGAGCGAATCAAACAACATCCTAAGAACCAG...GCTCTGGGTGGGGCTGCCGTTAAGGCACGTTCTTTCCTTACTGGTGCTGATAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR CAA 90 bp AGGCCGGCTGATGGTTTAAAGGAAGTAACTACATGGAGTCTAATCGAGACATTCAGCTCCTGCCGCTCTTaGGCTCTCTTCTCAGTAGCC +
Preference number: 5 (lower is better)
Translates to: RPADGLKEVTTWSLIETFSSCRS*ALFSVA
Trigger: GGCTACTGAGAAGAGAGCCAAAGAGCGGCAGGAGCT...GAATGTCTCGATTAGACTCCATGTAGTTACTTCCTTTAAACCATCAGCCGGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR CAA 90 bp CACGGTTCCCTGTTGTTATCAGCACCAGTAAGGAAAGAACGTGCCTTAACGGCATCAGAGGCTGGTCACTaGACTTTATCTCCAGACCCT +
Preference number: 5 (lower is better)
Translates to: HGSLLLSAPVRKERALTASEAGH*TLSPDP
Trigger: AGGGTCTGGAGATAAAGTCAAGTGACCAGCCTCTGA...TGCCGTTAAGGCACGTTCTTTCCTTACTGGTGCTGATAACAACAGGGAACCGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS CCA 90 bp TGCAGGTGGCATACAAGGCACAGTATGTCTACCCTTGGCTTTCTCTaGGGAAGATGCATTCTTTTCAGCAGTATCTTGATGAGCACTGCC +
Preference number: 5 (lower is better)
Translates to: CRWHTRHSMSTLGFL*GRCILFSSILMSTA
Trigger: GGCAGTGCTCATCAAGATACTGCTGAAAAGAATGCATCTTCCCCAGAGAAAGCCAAGGGTAGACATACTGTGCCTTGTATGCCACCTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS CCA 90 bp AATTTCCAAATCAAAGCCAATAGGCTCGGTGGGTGGTTTCACAGGTaGTTTCTTGGGCAAGATGGGCCCACCTTCAAGTATTCTGGGATC +
Preference number: 5 (lower is better)
Translates to: NFQIKANRLGGWFHR*FLGQDGPTFKYSGI
Trigger: GATCCCAGAATACTTGAAGGTGGGCCCATCTTGCCCAAGAAACCACCTGTGAAACCACCCACCGAGCCTATTGGCTTTGATTTGGAAATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS CCA 90 bp TGGAATCGAGTGGAGAATTTGGGAGATACAGGCACAGTCAGAGGCTaGTCACTTGACTTTATCTCCAGACCCTGGTACTTGCGTATTGGA +
Preference number: 5 (lower is better)
Translates to: WNRVENLGDTGTVRG*SLDFISRPWYLRIG
Trigger: TCCAATACGCAAGTACCAGGGTCTGGAGATAAAGTCAAGTGACCAGCCTCTGACTGTGCCTGTATCTCCCAAATTCTCCACTCGATTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR CAA 90 bp TCTAGTCAGAGTGAAGACCCATATAAAAGGCCGGCTGATGGTTTAAAGGAAGTAGCCCGTGCACGGTGTTaGGTTTGCAGTACAGGAGTC +
Preference number: 5 (lower is better)
Translates to: SSQSEDPYKRPADGLKEVARARC*VCSTGV
Trigger: GACTCCTGTACTGCAAACCAAACACCGTGCACGGGC...TACTTCCTTTAAACCATCAGCCGGCCTTTTATATGGGTCTTCACTCTGACTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR CAA 90 bp CACGGTTCCCTGTTGTTATCAGCACCAGTAAGGAAAGAACGTGCCTTAACGGCAATATTTCCACAGTTCTaGCCTCTGGGATTTGGGGCT +
Preference number: 5 (lower is better)
Translates to: HGSLLLSAPVRKERALTAIFPQF*PLGFGA
Trigger: AGCCCCAAATCCCAGAGGCAAGAACTGTGGAAATAT...TGCCGTTAAGGCACGTTCTTTCCTTACTGGTGCTGATAACAACAGGGAACCGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR CAA 90 bp CACGGTTCCCTGTTGTTATCAGCACCAGTAAGGAAAGAACGTGCCTTAACGGCAAATCGAGTGGAGAATTaGGGAGATACAGGCACAGTC +
Preference number: 5 (lower is better)
Translates to: HGSLLLSAPVRKERALTANRVEN*GDTGTV
Trigger: GACTGTGCCTGTATCTCCCAAATTCTCCACTCGATT...TGCCGTTAAGGCACGTTCTTTCCTTACTGGTGCTGATAACAACAGGGAACCGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS TCA 90 bp AGTGGAGAATTTGGGAGATACAGGCACAGTCAGAGGCTGGTCACTTaGCTTTATCTCCAGACCCTGGTACTTGCGTATTGGATTTGCCTT +
Preference number: 5 (lower is better)
Translates to: SGEFGRYRHSQRLVT*LYLQTLVLAYWICL
Trigger: AAGGCAAATCCAATACGCAAGTACCAGGGTCTGGAGATAAAGTCAAGTGACCAGCCTCTGACTGTGCCTGTATCTCCCAAATTCTCCACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS CCA 90 bp GATTCTTTTCTCAATTTCCAAATCAAAGCCAATAGGCTCGGTGGGTaGTTTCACAGGTGGTTTCTTGGGCAAGATGGGCCCACCTTCAAG +
Preference number: 5 (lower is better)
Translates to: DSFLNFQIKANRLGG*FHRWFLGQDGPTFK
Trigger: CTTGAAGGTGGGCCCATCTTGCCCAAGAAACCACCTGTGAAACCACCCACCGAGCCTATTGGCTTTGATTTGGAAATTGAGAAAAGAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR CAA 90 bp CACGGTTCCCTGTTGTTATCAGCACCAGTAAGGAAAGAACGTGCCTTAACGGCAAGGTCTGACTCAAAGTaGCAATCTTCTCTTTCACCC +
Preference number: 5 (lower is better)
Translates to: HGSLLLSAPVRKERALTARSDSK*QSSLSP
Trigger: GGGTGAAAGAGAAGATTGCAACTTTGAGTCAGACCT...TGCCGTTAAGGCACGTTCTTTCCTTACTGGTGCTGATAACAACAGGGAACCGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR CAA 90 bp CACGGTTCCCTGTTGTTATCAGCACCAGTAAGGAAAGAACGTGCCTTAACGGCAGGGAAGAACAAGCATTaGACGGAATGGATTGTTCCA +
Preference number: 5 (lower is better)
Translates to: HGSLLLSAPVRKERALTAGKNKH*TEWIVP
Trigger: TGGAACAATCCATTCCGTCAAATGCTTGTTCTTCCC...TGCCGTTAAGGCACGTTCTTTCCTTACTGGTGCTGATAACAACAGGGAACCGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR CAA 90 bp CACGGTTCCCTGTTGTTATCAGCACCAGTAAGGAAAGAACGTGCCTTAACGGCACATCTCCACCACCTCTaGCTGCATTTTCATACTCTT +
Preference number: 5 (lower is better)
Translates to: HGSLLLSAPVRKERALTAHLHHL*LHFHTL
Trigger: AAGAGTATGAAAATGCAGCAAGAGGTGGTGGAGATG...TGCCGTTAAGGCACGTTCTTTCCTTACTGGTGCTGATAACAACAGGGAACCGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR CAA 90 bp TCTAGTCAGAGTGAAGACCCATATAAAAGGCCGGCTGATGGTTTAAAGGAAGTAAGCTCTGCTGTACTTTaGCAGGTCACAGCCCGTGCA +
Preference number: 5 (lower is better)
Translates to: SSQSEDPYKRPADGLKEVSSAVL*QVTARA
Trigger: TGCACGGGCTGTGACCTGCAAAAGTACAGCAGAGCT...TACTTCCTTTAAACCATCAGCCGGCCTTTTATATGGGTCTTCACTCTGACTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR CAA 90 bp GTTATCAGCACCAGTAAGGAAAGAACGTGCCTTAACGGCAGCCCCACCCAGAGCTCACGTGCTTTGAATTaGTATTGTTGCAATTTCTCG +
Preference number: 5 (lower is better)
Translates to: VISTSKERTCLNGSPTQSSRALN*YCCNFS
Trigger: CGAGAAATTGCAACAATACAAATTCAAAGCACGTGA...GCTCTGGGTGGGGCTGCCGTTAAGGCACGTTCTTTCCTTACTGGTGCTGATAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS TCA 90 bp TTCTTTGGTGGGCATTCGAATTCTGTTCTTCAATGCAAAGGCTGGTaGCTTGGGGACGGTGATTGGAAGTACCTTCTTTTCAGGAACACC +
Preference number: 5 (lower is better)
Translates to: FFGGHSNSVLQCKGW*LGDGDWKYLLFRNT
Trigger: GGTGTTCCTGAAAAGAAGGTACTTCCAATCACCGTCCCCAAGTCACCAGCCTTTGCATTGAAGAACAGAATTCGAATGCCCACCAAAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS GCA 90 bp CATACAAGGCACAGTATGTCTACCCTTGGCTTTCTCTGGGGAAGATaGATTCTTTTCAGCAGTATCTTGATGAGCACTGCCTTCTTCCTC +
Preference number: 5 (lower is better)
Translates to: HTRHSMSTLGFLWGR*ILFSSILMSTAFFL
Trigger: GAGGAAGAAGGCAGTGCTCATCAAGATACTGCTGAAAAGAATGCATCTTCCCCAGAGAAAGCCAAGGGTAGACATACTGTGCCTTGTATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR CAA 90 bp CACGGTTCCCTGTTGTTATCAGCACCAGTAAGGAAAGAACGTGCCTTAACGGCAAGGTGTGACAATAGCTaGCTGAAGATTAGCCTTTCT +
Preference number: 5 (lower is better)
Translates to: HGSLLLSAPVRKERALTARCDNS*LKISLS
Trigger: AGAAAGGCTAATCTTCAGCAAGCTATTGTCACACCT...TGCCGTTAAGGCACGTTCTTTCCTTACTGGTGCTGATAACAACAGGGAACCGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS TCA 90 bp CTGATTTCTTCACAGGTTGCCCTATTCCAGCCAGAGCAAGTTTCTTaGATTCTTCATTCTTTTTCCGCATCTCCACCACCTCTTGCTGCA +
Preference number: 5 (lower is better)
Translates to: LISSQVALFQPEQVS*ILHSFSASPPPLAA
Trigger: TGCAGCAAGAGGTGGTGGAGATGCGGAAAAAGAATGAAGAATTCAAGAAACTTGCTCTGGCTGGAATAGGGCAACCTGTGAAGAAATCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS CCA 90 bp ACTTCTGCTTTGCAGGTGGCATACAAGGCACAGTATGTCTACCCTTaGCTTTCTCTGGGGAAGATGCATTCTTTTCAGCAGTATCTTGAT +
Preference number: 5 (lower is better)
Translates to: TSALQVAYKAQYVYP*LSLGKMHSFQQYLD
Trigger: ATCAAGATACTGCTGAAAAGAATGCATCTTCCCCAGAGAAAGCCAAGGGTAGACATACTGTGCCTTGTATGCCACCTGCAAAGCAGAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS CCA 90 bp TCCTGGTTCTTAGGATGTTGTTTGATTCGCTCATCTGTGCGGAAGTaGAAGTCAACTGATTTGGTGACCTGGCTCACTGATTTCTTCACA +
Preference number: 5 (lower is better)
Translates to: SWFLGCCLIRSSVRK*KSTDLVTWLTDFFT
Trigger: TGTGAAGAAATCAGTGAGCCAGGTCACCAAATCAGTTGACTTCCACTTCCGCACAGATGAGCGAATCAAACAACATCCTAAGAACCAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR CAA 90 bp AGGCCGGCTGATGGTTTAAAGGAAGTAACTACATGGAGTCTAATCGAGACATTCTGGAAGTCAACTGATTaGGTGACCTGGCTCACTGAT +
Preference number: 5 (lower is better)
Translates to: RPADGLKEVTTWSLIETFWKSTD*VTWLTD
Trigger: ATCAGTGAGCCAGGTCACCAAATCAGTTGACTTCCA...GAATGTCTCGATTAGACTCCATGTAGTTACTTCCTTTAAACCATCAGCCGGCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR CAA 90 bp TTAAAGGAAGTAACTACATGGAGTCTAATCGAGACATTCATGAGTTACATCTCAGGCAAGGGAAGTGCCTaGAACTTGGGCACCTCCCCT +
Preference number: 5 (lower is better)
Translates to: LKEVTTWSLIETFMSYISGKGSA*NLGTSP
Trigger: AGGGGAGGTGCCCAAGTTCAAGGCACTTCCCTTGCC...TGAGATGTAACTCATGAATGTCTCGATTAGACTCCATGTAGTTACTTCCTTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR CAA 90 bp AGGCCGGCTGATGGTTTAAAGGAAGTAACTACATGGAGTCTAATCGAGACATTCGGGAAGAACAAGCATTaGACGGAATGGATTGTTCCA +
Preference number: 5 (lower is better)
Translates to: RPADGLKEVTTWSLIETFGKNKH*TEWIVP
Trigger: TGGAACAATCCATTCCGTCAAATGCTTGTTCTTCCC...GAATGTCTCGATTAGACTCCATGTAGTTACTTCCTTTAAACCATCAGCCGGCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR CAA 90 bp TCTAGTCAGAGTGAAGACCCATATAAAAGGCCGGCTGATGGTTTAAAGGAAGTAGGGCTGGAGTTTTTCTaGATATGGCTGCCTCAACTT +
Preference number: 5 (lower is better)
Translates to: SSQSEDPYKRPADGLKEVGLEFF*IWLPQL
Trigger: AAGTTGAGGCAGCCATATCAAGAAAAACTCCAGCCC...TACTTCCTTTAAACCATCAGCCGGCCTTTTATATGGGTCTTCACTCTGACTAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR CAA 90 bp AGGCCGGCTGATGGTTTAAAGGAAGTAACTACATGGAGTCTAATCGAGACATTCCTTTTCAGCAGTATCTaGATGAGCACTGCCTTCTTC +
Preference number: 5 (lower is better)
Translates to: RPADGLKEVTTWSLIETFLFSSI*MSTAFF
Trigger: GAAGAAGGCAGTGCTCATCAAGATACTGCTGAAAAG...GAATGTCTCGATTAGACTCCATGTAGTTACTTCCTTTAAACCATCAGCCGGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR CAA 90 bp CACGGTTCCCTGTTGTTATCAGCACCAGTAAGGAAAGAACGTGCCTTAACGGCAGCCAGAGCAAGTTTCTaGAATTCTTCATTCTTTTTC +
Preference number: 5 (lower is better)
Translates to: HGSLLLSAPVRKERALTAARASF*NSSFFF
Trigger: GAAAAAGAATGAAGAATTCAAGAAACTTGCTCTGGC...TGCCGTTAAGGCACGTTCTTTCCTTACTGGTGCTGATAACAACAGGGAACCGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR CAA 90 bp TTAAAGGAAGTAACTACATGGAGTCTAATCGAGACATTCATGAGTTACATCTCAGCCCGTGCACGGTGTTaGGTTTGCAGTACAGGAGTC +
Preference number: 5 (lower is better)
Translates to: LKEVTTWSLIETFMSYISARARC*VCSTGV
Trigger: GACTCCTGTACTGCAAACCAAACACCGTGCACGGGC...TGAGATGTAACTCATGAATGTCTCGATTAGACTCCATGTAGTTACTTCCTTTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR CAA 90 bp TTAAAGGAAGTAACTACATGGAGTCTAATCGAGACATTCATGAGTTACATCTCAGGAAGTGCCTTGAACTaGGGCACCTCCCCTTTCTGC +
Preference number: 5 (lower is better)
Translates to: LKEVTTWSLIETFMSYISGSALN*GTSPFC
Trigger: GCAGAAAGGGGAGGTGCCCAAGTTCAAGGCACTTCC...TGAGATGTAACTCATGAATGTCTCGATTAGACTCCATGTAGTTACTTCCTTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR CAA 90 bp TACATGGAGTCTAATCGAGACATTCATGAGTTACATCTCATTATTAGCCTTAGTGGAAGTGCCTTGAACTaGGGCACCTCCCCTTTCTGC +
Preference number: 5 (lower is better)
Translates to: YMESNRDIHELHLIISLSGSALN*GTSPFC
Trigger: GCAGAAAGGGGAGGTGCCCAAGTTCAAGGCACTTCC...ACTAAGGCTAATAATGAGATGTAACTCATGAATGTCTCGATTAGACTCCATGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS TCA 90 bp CAGGTCACCTTCTGTGGTTTAATCAGTCTATCAGGCCTACAGGTCTaGCTCAAAGTTGCAATCTTCTCTTTCACCCCTTTTCTGAAATCT +
Preference number: 5 (lower is better)
Translates to: QVTFCGLISLSGLQV*LKVAIFSFTPFLKS
Trigger: AGATTTCAGAAAAGGGGTGAAAGAGAAGATTGCAACTTTGAGTCAGACCTGTAGGCCTGATAGACTGATTAAACCACAGAAGGTGACCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS GCA 90 bp CTGTGGTTTAATCAGTCTATCAGGCCTACAGGTCTGACTCAAAGTTaGAATCTTCTCTTTCACCCCTTTTCTGAAATCTTGAAGTCTGGC +
Preference number: 5 (lower is better)
Translates to: LWFNQSIRPTGLTQS*NLLFHPFSEILKSG
Trigger: GCCAGACTTCAAGATTTCAGAAAAGGGGTGAAAGAGAAGATTGCAACTTTGAGTCAGACCTGTAGGCCTGATAGACTGATTAAACCACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR CAA 90 bp TCTAGTCAGAGTGAAGACCCATATAAAAGGCCGGCTGATGGTTTAAAGGAAGTATCCAAGGATGAAAAATaGATGAAATCCGAGGGGGCA +
Preference number: 5 (lower is better)
Translates to: SSQSEDPYKRPADGLKEVSKDEK*MKSEGA
Trigger: TGCCCCCTCGGATTTCATCAATTTTTCATCCTTGGA...TACTTCCTTTAAACCATCAGCCGGCCTTTTATATGGGTCTTCACTCTGACTAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR CAA 90 bp TCTAGTCAGAGTGAAGACCCATATAAAAGGCCGGCTGATGGTTTAAAGGAAGTATTAGAAACTTCTGCTTaGCAGGTGGCATACAAGGCA +
Preference number: 5 (lower is better)
Translates to: SSQSEDPYKRPADGLKEVLETSA*QVAYKA
Trigger: TGCCTTGTATGCCACCTGCAAAGCAGAAGTTTCTAA...TACTTCCTTTAAACCATCAGCCGGCCTTTTATATGGGTCTTCACTCTGACTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR CAA 90 bp TCTAGTCAGAGTGAAGACCCATATAAAAGGCCGGCTGATGGTTTAAAGGAAGTATTCTTAGGATGTTGTTaGATTCGCTCATCTGTGCGG +
Preference number: 5 (lower is better)
Translates to: SSQSEDPYKRPADGLKEVFLGCC*IRSSVR
Trigger: CCGCACAGATGAGCGAATCAAACAACATCCTAAGAA...TACTTCCTTTAAACCATCAGCCGGCCTTTTATATGGGTCTTCACTCTGACTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR CAA 90 bp TTAAAGGAAGTAACTACATGGAGTCTAATCGAGACATTCATGAGTTACATCTCAAGCTCTGCTGTACTTTaGCAGGTCACAGCCCGTGCA +
Preference number: 5 (lower is better)
Translates to: LKEVTTWSLIETFMSYISSSAVL*QVTARA
Trigger: TGCACGGGCTGTGACCTGCAAAAGTACAGCAGAGCT...TGAGATGTAACTCATGAATGTCTCGATTAGACTCCATGTAGTTACTTCCTTTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR CAA 90 bp TCTAGTCAGAGTGAAGACCCATATAAAAGGCCGGCTGATGGTTTAAAGGAAGTATCTTCCTCATCTTCTTaGGTGGGCATTCGAATTCTG +
Preference number: 5 (lower is better)
Translates to: SSQSEDPYKRPADGLKEVSSSSS*VGIRIL
Trigger: CAGAATTCGAATGCCCACCAAAGAAGATGAGGAAGA...TACTTCCTTTAAACCATCAGCCGGCCTTTTATATGGGTCTTCACTCTGACTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR CAA 90 bp ACTACATGGAGTCTAATCGAGACATTCATGAGTTACATCTCATTATTAGCCTTATCTTGCCTCTGGGATTaGGGGCTTAAAAGGCACCCC +
Preference number: 5 (lower is better)
Translates to: TTWSLIETFMSYISLLALSCLWD*GLKRHP
Trigger: GGGGTGCCTTTTAAGCCCCAAATCCCAGAGGCAAGA...TAAGGCTAATAATGAGATGTAACTCATGAATGTCTCGATTAGACTCCATGTAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR CAA 90 bp TCTAGTCAGAGTGAAGACCCATATAAAAGGCCGGCTGATGGTTTAAAGGAAGTAACTTGCGTATTGGATTaGCCTTATGCACCAGTTCTC +
Preference number: 5 (lower is better)
Translates to: SSQSEDPYKRPADGLKEVTCVLD*PYAPVL
Trigger: GAGAACTGGTGCATAAGGCAAATCCAATACGCAAGT...TACTTCCTTTAAACCATCAGCCGGCCTTTTATATGGGTCTTCACTCTGACTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS TCA 90 bp ACGGAGCAAGACCCTGTCTTAATATCATCCTTCTTGCTCCTCAAATaGTATCTGTTAGGGGTTCGTTTATGGAAGTCTTCAACTTGCTGT +
Preference number: 5 (lower is better)
Translates to: TEQDPVLISSFLLLK*YLLGVRLWKSSTCC
Trigger: ACAGCAAGTTGAAGACTTCCATAAACGAACCCCTAACAGATATCATTTGAGGAGCAAGAAGGATGATATTAAGACAGGGTCTTGCTCCGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340513.4
CDS CCA 90 bp TGCTTTCGTAGTTCAGATGTAAAGTTCACTTCCTTATATTCCTCCTaGTTCTTAGGATGTTGTTTGATTCGCTCATCTGTGCGGAAGTGG +
Preference number: 5 (lower is better)
Translates to: CFRSSDVKFTSLYSS*FLGCCLIRSSVRKW
Trigger: CCACTTCCGCACAGATGAGCGAATCAAACAACATCCTAAGAACCAGGAGGAATATAAGGAAGTGAACTTTACATCTGAACTACGAAAGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR CAA 90 bp TCTAGTCAGAGTGAAGACCCATATAAAAGGCCGGCTGATGGTTTAAAGGAAGTATTTCCTTGGGACAGGTaGAAAGGCTTAACAATGGTA +
Preference number: 5 (lower is better)
Translates to: SSQSEDPYKRPADGLKEVFPWDR*KGLTMV
Trigger: TACCATTGTTAAGCCTTTCAACCTGTCCCAAGGAAA...TACTTCCTTTAAACCATCAGCCGGCCTTTTATATGGGTCTTCACTCTGACTAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR CAA 90 bp TGGTTTAAAGGAAGTAACTACATGGAGTCTAATCGAGACATTCATGAGTTACATTGCACGGTGTTTGGTTaGCAGTACAGGAGTCTGTGG +
Preference number: 5 (lower is better)
Translates to: WFKGSNYMESNRDIHELHCTVFG*QYRSLW
Trigger: CCACAGACTCCTGTACTGCAAACCAAACACCGTGCA...ATGTAACTCATGAATGTCTCGATTAGACTCCATGTAGTTACTTCCTTTAAACCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR CAA 90 bp TTAAAGGAAGTAACTACATGGAGTCTAATCGAGACATTCATGAGTTACATCTCAAAGACGGTCCTAGGTTaGAGGTTAAGAGCAGGTCCC +
Preference number: 5 (lower is better)
Translates to: LKEVTTWSLIETFMSYISKTVLG*RLRAGP
Trigger: GGGACCTGCTCTTAACCTCAAACCTAGGACCGTCTT...TGAGATGTAACTCATGAATGTCTCGATTAGACTCCATGTAGTTACTTCCTTTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR CAA 90 bp TTAAAGGAAGTAACTACATGGAGTCTAATCGAGACATTCATGAGTTACATCTCACTGCACGGTTCCCTGTaGTTATCAGCACCAGTAAGG +
Preference number: 5 (lower is better)
Translates to: LKEVTTWSLIETFMSYISLHGSL*LSAPVR
Trigger: CCTTACTGGTGCTGATAACAACAGGGAACCGTGCAG...TGAGATGTAACTCATGAATGTCTCGATTAGACTCCATGTAGTTACTTCCTTTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR CAA 90 bp AGGCCGGCTGATGGTTTAAAGGAAGTAACTACATGGAGTCTAATCGAGACATTCGCCAGAGCAAGTTTCTaGAATTCTTCATTCTTTTTC +
Preference number: 5 (lower is better)
Translates to: RPADGLKEVTTWSLIETFARASF*NSSFFF
Trigger: GAAAAAGAATGAAGAATTCAAGAAACTTGCTCTGGC...GAATGTCTCGATTAGACTCCATGTAGTTACTTCCTTTAAACCATCAGCCGGCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR CAA 90 bp TCTAGTCAGAGTGAAGACCCATATAAAAGGCCGGCTGATGGTTTAAAGGAAGTATTGGTCACAGAAGATTaGGAGGGTAACAGGTTAATA +
Preference number: 5 (lower is better)
Translates to: SSQSEDPYKRPADGLKEVLVTED*EGNRLI
Trigger: TATTAACCTGTTACCCTCCAAATCTTCTGTGACCAA...TACTTCCTTTAAACCATCAGCCGGCCTTTTATATGGGTCTTCACTCTGACTAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300403.11
CDS-3UTR CAA 90 bp AGGCCGGCTGATGGTTTAAAGGAAGTAACTACATGGAGTCTAATCGAGACATTCTTTGAATTTGTATTGTaGCAATTTCTCGAGCTCCTC +
Preference number: 5 (lower is better)
Translates to: RPADGLKEVTTWSLIETFFEFVL*QFLELL
Trigger: GAGGAGCTCGAGAAATTGCAACAATACAAATTCAAA...GAATGTCTCGATTAGACTCCATGTAGTTACTTCCTTTAAACCATCAGCCGGCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS TCA 90 bp ACACCCACAACATCTTCCAAAATCTTAGTAGGGCAAGGTCTGGAATaGAATTCAAAGTGTTCATCCTCTGTTTTCTTCTTTGATTCTCGC +
Preference number: 5 (lower is better)
Translates to: TPTTSSKILVGQGLE*NSKCSSSVFFFDSR
Trigger: GCGAGAATCAAAGAAGAAAACAGAGGATGAACACTTTGAATTTCATTCCAGACCTTGCCCTACTAAGATTTTGGAAGATGTTGTGGGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR CAA 90 bp TTAAAGGAAGTAACTACATGGAGTCTAATCGAGACATTCATGAGTTACATCTCAGGGCTGGAGTTTTTCTaGATATGGCTGCCTCAACTT +
Preference number: 5 (lower is better)
Translates to: LKEVTTWSLIETFMSYISGLEFF*IWLPQL
Trigger: AAGTTGAGGCAGCCATATCAAGAAAAACTCCAGCCC...TGAGATGTAACTCATGAATGTCTCGATTAGACTCCATGTAGTTACTTCCTTTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR CAA 90 bp ACTACATGGAGTCTAATCGAGACATTCATGAGTTACATCTCATTATTAGCCTTATGGAAGTCAACTGATTaGGTGACCTGGCTCACTGAT +
Preference number: 5 (lower is better)
Translates to: TTWSLIETFMSYISLLALWKSTD*VTWLTD
Trigger: ATCAGTGAGCCAGGTCACCAAATCAGTTGACTTCCA...TAAGGCTAATAATGAGATGTAACTCATGAATGTCTCGATTAGACTCCATGTAGT
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR CAA 90 bp ACTACATGGAGTCTAATCGAGACATTCATGAGTTACATCTCATTATTAGCCTTAATGGAAGTCTTCAACTaGCTGTGCAAGGGGCACATA +
Preference number: 5 (lower is better)
Translates to: TTWSLIETFMSYISLLALMEVFN*LCKGHI
Trigger: TATGTGCCCCTTGCACAGCAAGTTGAAGACTTCCAT...TAAGGCTAATAATGAGATGTAACTCATGAATGTCTCGATTAGACTCCATGTAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR CAA 90 bp TTAAAGGAAGTAACTACATGGAGTCTAATCGAGACATTCATGAGTTACATCTCAATGGAAGTCTTCAACTaGCTGTGCAAGGGGCACATA +
Preference number: 5 (lower is better)
Translates to: LKEVTTWSLIETFMSYISMEVFN*LCKGHI
Trigger: TATGTGCCCCTTGCACAGCAAGTTGAAGACTTCCAT...TGAGATGTAACTCATGAATGTCTCGATTAGACTCCATGTAGTTACTTCCTTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR CAA 90 bp TACATGGAGTCTAATCGAGACATTCATGAGTTACATCTCATTATTAGCCTTAGTATATTTCCACAGTTCTaGCCTCTGGGATTTGGGGCT +
Preference number: 5 (lower is better)
Translates to: YMESNRDIHELHLIISLSIFPQF*PLGFGA
Trigger: AGCCCCAAATCCCAGAGGCAAGAACTGTGGAAATAT...ACTAAGGCTAATAATGAGATGTAACTCATGAATGTCTCGATTAGACTCCATGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR CAA 90 bp ACTACATGGAGTCTAATCGAGACATTCATGAGTTACATCTCATTATTAGCCTTACCTGGTACTTGCGTATaGGATTTGCCTTATGCACCA +
Preference number: 5 (lower is better)
Translates to: TTWSLIETFMSYISLLALPGTCV*DLPYAP
Trigger: TGGTGCATAAGGCAAATCCAATACGCAAGTACCAGG...TAAGGCTAATAATGAGATGTAACTCATGAATGTCTCGATTAGACTCCATGTAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR CAA 90 bp TTAAAGGAAGTAACTACATGGAGTCTAATCGAGACATTCATGAGTTACATCTCATCCAGACCCTGGTACTaGCGTATTGGATTTGCCTTA +
Preference number: 5 (lower is better)
Translates to: LKEVTTWSLIETFMSYISSRPWY*RIGFAL
Trigger: TAAGGCAAATCCAATACGCAAGTACCAGGGTCTGGA...TGAGATGTAACTCATGAATGTCTCGATTAGACTCCATGTAGTTACTTCCTTTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR CAA 90 bp TACATGGAGTCTAATCGAGACATTCATGAGTTACATCTCATTATTAGCCTTAGTTCCAGACCCTGGTACTaGCGTATTGGATTTGCCTTA +
Preference number: 5 (lower is better)
Translates to: YMESNRDIHELHLIISLSSRPWY*RIGFAL
Trigger: TAAGGCAAATCCAATACGCAAGTACCAGGGTCTGGA...ACTAAGGCTAATAATGAGATGTAACTCATGAATGTCTCGATTAGACTCCATGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR CAA 90 bp TTAAAGGAAGTAACTACATGGAGTCTAATCGAGACATTCATGAGTTACATCTCAAATCGAGTGGAGAATTaGGGAGATACAGGCACAGTC +
Preference number: 5 (lower is better)
Translates to: LKEVTTWSLIETFMSYISNRVEN*GDTGTV
Trigger: GACTGTGCCTGTATCTCCCAAATTCTCCACTCGATT...TGAGATGTAACTCATGAATGTCTCGATTAGACTCCATGTAGTTACTTCCTTTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR CAA 90 bp TGGTTTAAAGGAAGTAACTACATGGAGTCTAATCGAGACATTCATGAGTTACATAGGTCTGACTCAAAGTaGCAATCTTCTCTTTCACCC +
Preference number: 5 (lower is better)
Translates to: WFKGSNYMESNRDIHELHRSDSK*QSSLSP
Trigger: GGGTGAAAGAGAAGATTGCAACTTTGAGTCAGACCT...ATGTAACTCATGAATGTCTCGATTAGACTCCATGTAGTTACTTCCTTTAAACCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR CAA 90 bp TGGTTTAAAGGAAGTAACTACATGGAGTCTAATCGAGACATTCATGAGTTACATTTAGAAACTTCTGCTTaGCAGGTGGCATACAAGGCA +
Preference number: 5 (lower is better)
Translates to: WFKGSNYMESNRDIHELHLETSA*QVAYKA
Trigger: TGCCTTGTATGCCACCTGCAAAGCAGAAGTTTCTAA...ATGTAACTCATGAATGTCTCGATTAGACTCCATGTAGTTACTTCCTTTAAACCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR CAA 90 bp TGGTTTAAAGGAAGTAACTACATGGAGTCTAATCGAGACATTCATGAGTTACATCATCTCCACCACCTCTaGCTGCATTTTCATACTCTT +
Preference number: 5 (lower is better)
Translates to: WFKGSNYMESNRDIHELHHLHHL*LHFHTL
Trigger: AAGAGTATGAAAATGCAGCAAGAGGTGGTGGAGATG...ATGTAACTCATGAATGTCTCGATTAGACTCCATGTAGTTACTTCCTTTAAACCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR CAA 90 bp ACTACATGGAGTCTAATCGAGACATTCATGAGTTACATCTCATTATTAGCCTTATTCTTAGGATGTTGTTaGATTCGCTCATCTGTGCGG +
Preference number: 5 (lower is better)
Translates to: TTWSLIETFMSYISLLALFLGCC*IRSSVR
Trigger: CCGCACAGATGAGCGAATCAAACAACATCCTAAGAA...TAAGGCTAATAATGAGATGTAACTCATGAATGTCTCGATTAGACTCCATGTAGT
39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR CAA 90 bp ACTACATGGAGTCTAATCGAGACATTCATGAGTTACATCTCATTATTAGCCTTATCTTCCTCATCTTCTTaGGTGGGCATTCGAATTCTG +
Preference number: 5 (lower is better)
Translates to: TTWSLIETFMSYISLLALSSSSS*VGIRIL
Trigger: CAGAATTCGAATGCCCACCAAAGAAGATGAGGAAGA...TAAGGCTAATAATGAGATGTAACTCATGAATGTCTCGATTAGACTCCATGTAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR CAA 90 bp TTAAAGGAAGTAACTACATGGAGTCTAATCGAGACATTCATGAGTTACATCTCAATAATGTGGCACAGGTaGAGCTTTTATCACTACCGG +
Preference number: 5 (lower is better)
Translates to: LKEVTTWSLIETFMSYISIMWHR*SFYHYR
Trigger: CCGGTAGTGATAAAAGCTCAACCTGTGCCACATTAT...TGAGATGTAACTCATGAATGTCTCGATTAGACTCCATGTAGTTACTTCCTTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR CAA 90 bp ACTACATGGAGTCTAATCGAGACATTCATGAGTTACATCTCATTATTAGCCTTAATAATGTGGCACAGGTaGAGCTTTTATCACTACCGG +
Preference number: 5 (lower is better)
Translates to: TTWSLIETFMSYISLLALIMWHR*SFYHYR
Trigger: CCGGTAGTGATAAAAGCTCAACCTGTGCCACATTAT...TAAGGCTAATAATGAGATGTAACTCATGAATGTCTCGATTAGACTCCATGTAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR CAA 90 bp TACATGGAGTCTAATCGAGACATTCATGAGTTACATCTCATTATTAGCCTTAGTACTTGCGTATTGGATTaGCCTTATGCACCAGTTCTC +
Preference number: 5 (lower is better)
Translates to: YMESNRDIHELHLIISLSTCVLD*PYAPVL
Trigger: GAGAACTGGTGCATAAGGCAAATCCAATACGCAAGT...ACTAAGGCTAATAATGAGATGTAACTCATGAATGTCTCGATTAGACTCCATGTA
39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR CAA 90 bp TACATGGAGTCTAATCGAGACATTCATGAGTTACATCTCATTATTAGCCTTAGTAACTGGAGTCCACAGTaGTCAAGTATGCTTTCTCAG +
Preference number: 5 (lower is better)
Translates to: YMESNRDIHELHLIISLSNWSPQ*SSMLSQ
Trigger: CTGAGAAAGCATACTTGACAACTGTGGACTCCAGTT...ACTAAGGCTAATAATGAGATGTAACTCATGAATGTCTCGATTAGACTCCATGTA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR CAA 90 bp TTAAAGGAAGTAACTACATGGAGTCTAATCGAGACATTCATGAGTTACATCTCATTGGTCACAGAAGATTaGGAGGGTAACAGGTTTGGA +
Preference number: 5 (lower is better)
Translates to: LKEVTTWSLIETFMSYISLVTED*EGNRFG
Trigger: TCCAAACCTGTTACCCTCCAAATCTTCTGTGACCAA...TGAGATGTAACTCATGAATGTCTCGATTAGACTCCATGTAGTTACTTCCTTTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340513.4
CDS-3UTR CAA 90 bp ACTACATGGAGTCTAATCGAGACATTCATGAGTTACATCTCATTATTAGCCTTAGGTTTTTCCCAGTATTaGTACCACTTTTCTCAGCAG +
Preference number: 5 (lower is better)
Translates to: TTWSLIETFMSYISLLALGFSQY*YHFSQQ
Trigger: CTGCTGAGAAAAGTGGTACAAATACTGGGAAAAACC...TAAGGCTAATAATGAGATGTAACTCATGAATGTCTCGATTAGACTCCATGTAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR CAA 90 bp ACTACATGGAGTCTAATCGAGACATTCATGAGTTACATCTCATTATTAGCCTTAAGGTGTGACAATAGCTaGCTGAAGATTAGCCTTTCT +
Preference number: 5 (lower is better)
Translates to: TTWSLIETFMSYISLLALRCDNS*LKISLS
Trigger: AGAAAGGCTAATCTTCAGCAAGCTATTGTCACACCT...TAAGGCTAATAATGAGATGTAACTCATGAATGTCTCGATTAGACTCCATGTAGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR CAA 90 bp TGGTTTAAAGGAAGTAACTACATGGAGTCTAATCGAGACATTCATGAGTTACATTTTCCTTGGGACAGGTaGAAAGGCTTAACAATGGTA +
Preference number: 5 (lower is better)
Translates to: WFKGSNYMESNRDIHELHFPWDR*KGLTMV
Trigger: TACCATTGTTAAGCCTTTCAACCTGTCCCAAGGAAA...ATGTAACTCATGAATGTCTCGATTAGACTCCATGTAGTTACTTCCTTTAAACCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR CAA 90 bp ACTACATGGAGTCTAATCGAGACATTCATGAGTTACATCTCATTATTAGCCTTATGTTCTTTTCTTTCCTaGGGACAGGTTGAAAGGCTT +
Preference number: 5 (lower is better)
Translates to: TTWSLIETFMSYISLLALCSFLS*GQVERL
Trigger: AAGCCTTTCAACCTGTCCCAAGGAAAGAAAAGAACA...TAAGGCTAATAATGAGATGTAACTCATGAATGTCTCGATTAGACTCCATGTAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR CAA 90 bp TACATGGAGTCTAATCGAGACATTCATGAGTTACATCTCATTATTAGCCTTAGTAACTTATTCTCCAAATaGGCCTTCTCCTCAAACCAT +
Preference number: 5 (lower is better)
Translates to: YMESNRDIHELHLIISLSNLFSK*AFSSNH
Trigger: ATGGTTTGAGGAGAAGGCCAATTTGGAGAATAAGTT...ACTAAGGCTAATAATGAGATGTAACTCATGAATGTCTCGATTAGACTCCATGTA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR CAA 90 bp TGGTTTAAAGGAAGTAACTACATGGAGTCTAATCGAGACATTCATGAGTTACATTGCTTTGAATTTGTATaGTTGCAATTTCTCGAGCTC +
Preference number: 5 (lower is better)
Translates to: WFKGSNYMESNRDIHELHCFEFV*LQFLEL
Trigger: GAGCTCGAGAAATTGCAACAATACAAATTCAAAGCA...ATGTAACTCATGAATGTCTCGATTAGACTCCATGTAGTTACTTCCTTTAAACCA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR CAA 90 bp TACATGGAGTCTAATCGAGACATTCATGAGTTACATCTCATTATTAGCCTTAGTTGCTTTGAATTTGTATaGTTGCAATTTCTCGAGCTC +
Preference number: 5 (lower is better)
Translates to: YMESNRDIHELHLIISLSCFEFV*LQFLEL
Trigger: GAGCTCGAGAAATTGCAACAATACAAATTCAAAGCA...ACTAAGGCTAATAATGAGATGTAACTCATGAATGTCTCGATTAGACTCCATGTA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS-3UTR CAA 90 bp TGGTTTAAAGGAAGTAACTACATGGAGTCTAATCGAGACATTCATGAGTTACATTCACGTGCTTTGAATTaGTATTGTTGCAATTTCTCG +
Preference number: 5 (lower is better)
Translates to: WFKGSNYMESNRDIHELHSRALN*YCCNFS
Trigger: CGAGAAATTGCAACAATACAAATTCAAAGCACGTGA...ATGTAACTCATGAATGTCTCGATTAGACTCCATGTAGTTACTTCCTTTAAACCA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS TCA 72 bp GGCCTAGCGGCGCGAACGGCGCTAGGGGCTGGAAGGTaGACTTCAGCCGTTCCAAACTCCGGGAGGAGGGAG +
Preference number: 6 (lower is better)
Translates to: GLAARTALGAGR*TSAVPNSGRRE
Trigger: CTCCCTCCTCCCGGAGTTTGGAACGGCTGAAGTTCACCTTCCAGCCCCTAGCGCCGTTCGCGCCGCTAGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS CCA 72 bp GAAGCCAGGCCTAGCGGCGCGAACGGCGCTAGGGGCTaGAAGGTGAACTTCAGCCGTTCCAAACTCCGGGAG +
Preference number: 6 (lower is better)
Translates to: EARPSGANGARG*KVNFSRSKLRE
Trigger: CTCCCGGAGTTTGGAACGGCTGAAGTTCACCTTCCAGCCCCTAGCGCCGTTCGCGCCGCTAGGCCTGGCTTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS TCA 72 bp TTTCTTCCCACGGCTCACCTAGCCTCGCCTCAGATCTaGCAACGAAGCGCGAGCCAACCCGCCGCGGGACTC +
Preference number: 6 (lower is better)
Translates to: FLPTAHLASPQI*QRSASQPAAGL
Trigger: GAGTCCCGCGGCGGGTTGGCTCGCGCTTCGTTGTCAGATCTGAGGCGAGGCTAGGTGAGCCGTGGGAAGAAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS GCA 72 bp CTCCAGCTCTGCTGTACTTTTGCAGGTCACAGCCCGTaGACGGTGTTTGGTTTGCAGTACAGGAGTCTGTGG +
Preference number: 6 (lower is better)
Translates to: LQLCCTFAGHSP*TVFGLQYRSLW
Trigger: CCACAGACTCCTGTACTGCAAACCAAACACCGTGCACGGGCTGTGACCTGCAAAAGTACAGCAGAGCTGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS GCA 72 bp TTGTTGCAATTTCTCGAGCTCCTCAGCCTCCAGCTCTaGTGTACTTTTGCAGGTCACAGCCCGTGCACGGTG +
Preference number: 6 (lower is better)
Translates to: LLQFLELLSLQL*CTFAGHSPCTV
Trigger: CACCGTGCACGGGCTGTGACCTGCAAAAGTACAGCAGAGCTGGAGGCTGAGGAGCTCGAGAAATTGCAACAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS CAA 72 bp GCTGTACTTTTGCAGGTCACAGCCCGTGCACGGTGTTaGGTTTGCAGTACAGGAGTCTGTGGGTCTCTGCAA +
Preference number: 6 (lower is better)
Translates to: AVLLQVTARARC*VCSTGVCGSLQ
Trigger: TTGCAGAGACCCACAGACTCCTGTACTGCAAACCAAACACCGTGCACGGGCTGTGACCTGCAAAAGTACAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS CAA 72 bp CCAATAGGCTCGGTGGGTGGTTTCACAGGTGGTTTCTaGGGCAAGATGGGCCCACCTTCAAGTATTCTGGGA +
Preference number: 6 (lower is better)
Translates to: PIGSVGGFTGGF*GKMGPPSSILG
Trigger: TCCCAGAATACTTGAAGGTGGGCCCATCTTGCCCAAGAAACCACCTGTGAAACCACCCACCGAGCCTATTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS CAA 90 bp TCCAGCTCTGCTGTACTTTTGCAGGTCACAGCCCGTGCACGGTGTTaGGTTTGCAGTACAGGAGTCTGTGGGTCTCTGCAAATCTTGGTC +
Preference number: 6 (lower is better)
Translates to: SSSAVLLQVTARARC*VCSTGVCGSLQILV
Trigger: GACCAAGATTTGCAGAGACCCACAGACTCCTGTACTGCAAACCAAACACCGTGCACGGGCTGTGACCTGCAAAAGTACAGCAGAGCTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS CCA 72 bp CTGTACTTTTGCAGGTCACAGCCCGTGCACGGTGTTTaGTTTGCAGTACAGGAGTCTGTGGGTCTCTGCAAA +
Preference number: 6 (lower is better)
Translates to: LYFCRSQPVHGV*FAVQESVGLCK
Trigger: TTTGCAGAGACCCACAGACTCCTGTACTGCAAACCAAACACCGTGCACGGGCTGTGACCTGCAAAAGTACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS CAA 90 bp CTCTGCTGTACTTTTGCAGGTCACAGCCCGTGCACGGTGTTTGGTTaGCAGTACAGGAGTCTGTGGGTCTCTGCAAATCTTGGTCACAGA +
Preference number: 6 (lower is better)
Translates to: LCCTFAGHSPCTVFG*QYRSLWVSANLGHR
Trigger: TCTGTGACCAAGATTTGCAGAGACCCACAGACTCCTGTACTGCAAACCAAACACCGTGCACGGGCTGTGACCTGCAAAAGTACAGCAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS GCA 72 bp TCTCAGTTCTTCTTCCAGCTGGTGCTTCCAAGTCTGTaGCTTCAGAGCACCTCTTCTGTCAGTCTCCAAGCA +
Preference number: 6 (lower is better)
Translates to: SQFFFQLVLPSL*LQSTSSVSLQA
Trigger: TGCTTGGAGACTGACAGAAGAGGTGCTCTGAAGGCACAGACTTGGAAGCACCAGCTGGAAGAAGAACTGAGA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS CCA 72 bp ATCAAAGCCAATAGGCTCGGTGGGTGGTTTCACAGGTaGTTTCTTGGGCAAGATGGGCCCACCTTCAAGTAT +
Preference number: 6 (lower is better)
Translates to: IKANRLGGWFHR*FLGQDGPTFKY
Trigger: ATACTTGAAGGTGGGCCCATCTTGCCCAAGAAACCACCTGTGAAACCACCCACCGAGCCTATTGGCTTTGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS CCA 72 bp CTCAATTTCCAAATCAAAGCCAATAGGCTCGGTGGGTaGTTTCACAGGTGGTTTCTTGGGCAAGATGGGCCC +
Preference number: 6 (lower is better)
Translates to: LNFQIKANRLGG*FHRWFLGQDGP
Trigger: GGGCCCATCTTGCCCAAGAAACCACCTGTGAAACCACCCACCGAGCCTATTGGCTTTGATTTGGAAATTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS CCA 72 bp CTTGGGAACAAAGGGCTCCTGAGAGATGACGGTGTTTaGACGAGCCTTGAAACAAGCTGCTTCTTTCTGCTG +
Preference number: 6 (lower is better)
Translates to: LGNKGLLRDDGV*TSLETSCFFLL
Trigger: CAGCAGAAAGAAGCAGCTTGTTTCAAGGCTCGTCCAAACACCGTCATCTCTCAGGAGCCCTTTGTTCCCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS CAA 72 bp ACTTTTGCAGGTCACAGCCCGTGCACGGTGTTTGGTTaGCAGTACAGGAGTCTGTGGGTCTCTGCAAATCTT +
Preference number: 6 (lower is better)
Translates to: TFAGHSPCTVFG*QYRSLWVSANL
Trigger: AAGATTTGCAGAGACCCACAGACTCCTGTACTGCAAACCAAACACCGTGCACGGGCTGTGACCTGCAAAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS CAA 90 bp ACAGTCAGAGGCTGGTCACTTGACTTTATCTCCAGACCCTGGTACTaGCGTATTGGATTTGCCTTATGCACCAGTTCTCTCCGTAGCCTG +
Preference number: 6 (lower is better)
Translates to: TVRGWSLDFISRPWY*RIGFALCTSSLRSL
Trigger: CAGGCTACGGAGAGAACTGGTGCATAAGGCAAATCCAATACGCAAGTACCAGGGTCTGGAGATAAAGTCAAGTGACCAGCCTCTGACTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS TCA 72 bp GCTCATCTGTGCGGAAGTGGAAGTCAACTGATTTGGTaGCCTGGCTCACTGATTTCTTCACAGGTTGCCCTA +
Preference number: 6 (lower is better)
Translates to: AHLCGSGSQLIW*PGSLISSQVAL
Trigger: TAGGGCAACCTGTGAAGAAATCAGTGAGCCAGGTCACCAAATCAGTTGACTTCCACTTCCGCACAGATGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS CCA 72 bp GTGGAGAATTTGGGAGATACAGGCACAGTCAGAGGCTaGTCACTTGACTTTATCTCCAGACCCTGGTACTTG +
Preference number: 6 (lower is better)
Translates to: VENLGDTGTVRG*SLDFISRPWYL
Trigger: CAAGTACCAGGGTCTGGAGATAAAGTCAAGTGACCAGCCTCTGACTGTGCCTGTATCTCCCAAATTCTCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS CCA 72 bp ACAGCTGAGTTTAGCAGTGGAATCGAGTGGAGAATTTaGGAGATACAGGCACAGTCAGAGGCTGGTCACTTG +
Preference number: 6 (lower is better)
Translates to: TAEFSSGIEWRI*EIQAQSEAGHL
Trigger: CAAGTGACCAGCCTCTGACTGTGCCTGTATCTCCCAAATTCTCCACTCGATTCCACTGCTAAACTCAGCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS CAA 72 bp GTCTGTGGGTCTCTGCAAATCTTGGTCACAGAAGATTaGGAGGGTAACAGGTTTGGAAGGCTAAGGCAGGAG +
Preference number: 6 (lower is better)
Translates to: VCGSLQILVTED*EGNRFGRLRQE
Trigger: CTCCTGCCTTAGCCTTCCAAACCTGTTACCCTCCAAATCTTCTGTGACCAAGATTTGCAGAGACCCACAGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340513.4
CDS CAA 90 bp AAATCAAAGCCAATAGGCTCGGTGGGTGGTTTCACAGGTGGTTTCTaGGGCAAGATGGGCCCACCTTCAAGTATTCTGGGATCAAGTTCA +
Preference number: 6 (lower is better)
Translates to: KSKPIGSVGGFTGGF*GKMGPPSSILGSSS
Trigger: TGAACTTGATCCCAGAATACTTGAAGGTGGGCCCATCTTGCCCAAGAAACCACCTGTGAAACCACCCACCGAGCCTATTGGCTTTGATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS CAA 90 bp GAGTGGAGAATTTGGGAGATACAGGCACAGTCAGAGGCTGGTCACTaGACTTTATCTCCAGACCCTGGTACTTGCGTATTGGATTTGCCT +
Preference number: 6 (lower is better)
Translates to: EWRIWEIQAQSEAGH*TLSPDPGTCVLDLP
Trigger: AGGCAAATCCAATACGCAAGTACCAGGGTCTGGAGATAAAGTCAAGTGACCAGCCTCTGACTGTGCCTGTATCTCCCAAATTCTCCACTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS CAA 90 bp CGGTGTTTGGTTTGCAGTACAGGAGTCTGTGGGTCTCTGCAAATCTaGGTCACAGAAGATTTGGAGGGTAACAGGTTTGGAAGGCTAAGG +
Preference number: 6 (lower is better)
Translates to: RCLVCSTGVCGSLQI*VTEDLEGNRFGRLR
Trigger: CCTTAGCCTTCCAAACCTGTTACCCTCCAAATCTTCTGTGACCAAGATTTGCAGAGACCCACAGACTCCTGTACTGCAAACCAAACACCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340513.4
CDS GCA 72 bp GCTGGTCACTTGACTTTATCTCCAGACCCTGGTACTTaGGTATTGGATTTGCCTTATGCACCAGTTCTCTCC +
Preference number: 6 (lower is better)
Translates to: AGHLTLSPDPGT*VLDLPYAPVLS
Trigger: GGAGAGAACTGGTGCATAAGGCAAATCCAATACGCAAGTACCAGGGTCTGGAGATAAAGTCAAGTGACCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS CCA 72 bp TTGCAGGTGGCATACAAGGCACAGTATGTCTACCCTTaGCTTTCTCTGGGGAAGATGCATTCTTTTCAGCAG +
Preference number: 6 (lower is better)
Translates to: LQVAYKAQYVYP*LSLGKMHSFQQ
Trigger: CTGCTGAAAAGAATGCATCTTCCCCAGAGAAAGCCAAGGGTAGACATACTGTGCCTTGTATGCCACCTGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS CCA 72 bp TCTGTGCGGAAGTGGAAGTCAACTGATTTGGTGACCTaGCTCACTGATTTCTTCACAGGTTGCCCTATTCCA +
Preference number: 6 (lower is better)
Translates to: SVRKWKSTDLVT*LTDFFTGCPIP
Trigger: TGGAATAGGGCAACCTGTGAAGAAATCAGTGAGCCAGGTCACCAAATCAGTTGACTTCCACTTCCGCACAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS CCA 72 bp GTCAGAGGCTGGTCACTTGACTTTATCTCCAGACCCTaGTACTTGCGTATTGGATTTGCCTTATGCACCAGT +
Preference number: 6 (lower is better)
Translates to: VRGWSLDFISRP*YLRIGFALCTS
Trigger: ACTGGTGCATAAGGCAAATCCAATACGCAAGTACCAGGGTCTGGAGATAAAGTCAAGTGACCAGCCTCTGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS CAA 72 bp ATTCGCTCATCTGTGCGGAAGTGGAAGTCAACTGATTaGGTGACCTGGCTCACTGATTTCTTCACAGGTTGC +
Preference number: 6 (lower is better)
Translates to: IRSSVRKWKSTD*VTWLTDFFTGC
Trigger: GCAACCTGTGAAGAAATCAGTGAGCCAGGTCACCAAATCAGTTGACTTCCACTTCCGCACAGATGAGCGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS CAA 72 bp CACTTGACTTTATCTCCAGACCCTGGTACTTGCGTATaGGATTTGCCTTATGCACCAGTTCTCTCCGTAGCC +
Preference number: 6 (lower is better)
Translates to: HLTLSPDPGTCV*DLPYAPVLSVA
Trigger: GGCTACGGAGAGAACTGGTGCATAAGGCAAATCCAATACGCAAGTACCAGGGTCTGGAGATAAAGTCAAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS CAA 72 bp GGCTGGTCACTTGACTTTATCTCCAGACCCTGGTACTaGCGTATTGGATTTGCCTTATGCACCAGTTCTCTC +
Preference number: 6 (lower is better)
Translates to: GWSLDFISRPWY*RIGFALCTSSL
Trigger: GAGAGAACTGGTGCATAAGGCAAATCCAATACGCAAGTACCAGGGTCTGGAGATAAAGTCAAGTGACCAGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS CAA 90 bp TGTTGTTTGATTCGCTCATCTGTGCGGAAGTGGAAGTCAACTGATTaGGTGACCTGGCTCACTGATTTCTTCACAGGTTGCCCTATTCCA +
Preference number: 6 (lower is better)
Translates to: CCLIRSSVRKWKSTD*VTWLTDFFTGCPIP
Trigger: TGGAATAGGGCAACCTGTGAAGAAATCAGTGAGCCAGGTCACCAAATCAGTTGACTTCCACTTCCGCACAGATGAGCGAATCAAACAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS GCA 72 bp GGTGTTTGGTTTGCAGTACAGGAGTCTGTGGGTCTCTaGAAATCTTGGTCACAGAAGATTTGGAGGGTAACA +
Preference number: 6 (lower is better)
Translates to: GVWFAVQESVGL*KSWSQKIWRVT
Trigger: TGTTACCCTCCAAATCTTCTGTGACCAAGATTTGCAGAGACCCACAGACTCCTGTACTGCAAACCAAACACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS CCA 72 bp ATCTTCTCTGAGGCTGGGCTGGAGTTTTTCTTGATATaGCTGCCTCAACTTCCAGGGAAGAACAAGCATTTG +
Preference number: 6 (lower is better)
Translates to: IFSEAGLEFFLI*LPQLPGKNKHL
Trigger: CAAATGCTTGTTCTTCCCTGGAAGTTGAGGCAGCCATATCAAGAAAAACTCCAGCCCAGCCTCAGAGAAGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS CAA 90 bp ACTGATTTCTTCACAGGTTGCCCTATTCCAGCCAGAGCAAGTTTCTaGAATTCTTCATTCTTTTTCCGCATCTCCACCACCTCTTGCTGC +
Preference number: 6 (lower is better)
Translates to: TDFFTGCPIPARASF*NSSFFFRISTTSCC
Trigger: GCAGCAAGAGGTGGTGGAGATGCGGAAAAAGAATGAAGAATTCAAGAAACTTGCTCTGGCTGGAATAGGGCAACCTGTGAAGAAATCAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS CAA 90 bp CGGTGTTTGGTTTGCAGTACAGGAGTCTGTGGGTCTCTGCAAATCTaGGTCACAGAAGATTTGGAGGGTAACAGGTTAATATCATCCTTC +
Preference number: 6 (lower is better)
Translates to: RCLVCSTGVCGSLQI*VTEDLEGNRLISSF
Trigger: GAAGGATGATATTAACCTGTTACCCTCCAAATCTTCTGTGACCAAGATTTGCAGAGACCCACAGACTCCTGTACTGCAAACCAAACACCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300403.11
CDS TCA 72 bp TCACAGGTTGCCCTATTCCAGCCAGAGCAAGTTTCTTaGATTCTTCATTCTTTTTCCGCATCTCCACCACCT +
Preference number: 6 (lower is better)
Translates to: SQVALFQPEQVS*ILHSFSASPPP
Trigger: AGGTGGTGGAGATGCGGAAAAAGAATGAAGAATTCAAGAAACTTGCTCTGGCTGGAATAGGGCAACCTGTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS TCA 72 bp ACTGATTTCTTCTCTTTCTTGGGAACAAAGGGCTCCTaGGAGATGACGGTGTTTGGACGAGCCTTGAAACAA +
Preference number: 6 (lower is better)
Translates to: TDFFSFLGTKGS*EMTVFGRALKQ
Trigger: TTGTTTCAAGGCTCGTCCAAACACCGTCATCTCTCAGGAGCCCTTTGTTCCCAAGAAAGAGAAGAAATCAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS CCA 72 bp TTAGGATGTTGTTTGATTCGCTCATCTGTGCGGAAGTaGAAGTCAACTGATTTGGTGACCTGGCTCACTGAT +
Preference number: 6 (lower is better)
Translates to: LGCCLIRSSVRK*KSTDLVTWLTD
Trigger: ATCAGTGAGCCAGGTCACCAAATCAGTTGACTTCCACTTCCGCACAGATGAGCGAATCAAACAACATCCTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS GCA 72 bp GGGCCCACCTTCAAGTATTCTGGGATCAAGTTCACGTaGTTTGAATTTGTATTGTTGCAATTTCTCGAGCTC +
Preference number: 6 (lower is better)
Translates to: GPTFKYSGIKFT*FEFVLLQFLEL
Trigger: GAGCTCGAGAAATTGCAACAATACAAATTCAAAGCACGTGAACTTGATCCCAGAATACTTGAAGGTGGGCCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS CCA 72 bp CATACAAGGCACAGTATGTCTACCCTTGGCTTTCTCTaGGGAAGATGCATTCTTTTCAGCAGTATCTTGATG +
Preference number: 6 (lower is better)
Translates to: HTRHSMSTLGFL*GRCILFSSILM
Trigger: CATCAAGATACTGCTGAAAAGAATGCATCTTCCCCAGAGAAAGCCAAGGGTAGACATACTGTGCCTTGTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS CAA 72 bp GTTCACTTCCTTATATTCCTCCTGGTTCTTAGGATGTaGTTTGATTCGCTCATCTGTGCGGAAGTGGAAGTC +
Preference number: 6 (lower is better)
Translates to: VHFLIFLLVLRM*FDSLICAEVEV
Trigger: GACTTCCACTTCCGCACAGATGAGCGAATCAAACAACATCCTAAGAACCAGGAGGAATATAAGGAAGTGAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS CAA 72 bp GTCTGTGGGTCTCTGCAAATCTTGGTCACAGAAGATTaGGAGGGTAACAGGTTAATATCATCCTTCTTGCTC +
Preference number: 6 (lower is better)
Translates to: VCGSLQILVTED*EGNRLISSFLL
Trigger: GAGCAAGAAGGATGATATTAACCTGTTACCCTCCAAATCTTCTGTGACCAAGATTTGCAGAGACCCACAGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300403.11
CDS CAA 72 bp TTTCTCTGGGGAAGATGCATTCTTTTCAGCAGTATCTaGATGAGCACTGCCTTCTTCCTCTGGCTTCTTTTT +
Preference number: 6 (lower is better)
Translates to: FLWGRCILFSSI*MSTAFFLWLLF
Trigger: AAAAAGAAGCCAGAGGAAGAAGGCAGTGCTCATCAAGATACTGCTGAAAAGAATGCATCTTCCCCAGAGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS CAA 72 bp ACTTCCTTATATTCCTCCTGGTTCTTAGGATGTTGTTaGATTCGCTCATCTGTGCGGAAGTGGAAGTCAACT +
Preference number: 6 (lower is better)
Translates to: TSLYSSWFLGCC*IRSSVRKWKST
Trigger: AGTTGACTTCCACTTCCGCACAGATGAGCGAATCAAACAACATCCTAAGAACCAGGAGGAATATAAGGAAGT
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS CAA 90 bp GTAAAGTTCACTTCCTTATATTCCTCCTGGTTCTTAGGATGTTGTTaGATTCGCTCATCTGTGCGGAAGTGGAAGTCAACTGATTTGGTG +
Preference number: 6 (lower is better)
Translates to: VKFTSLYSSWFLGCC*IRSSVRKWKSTDLV
Trigger: CACCAAATCAGTTGACTTCCACTTCCGCACAGATGAGCGAATCAAACAACATCCTAAGAACCAGGAGGAATATAAGGAAGTGAACTTTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS TCA 72 bp TATGGCTGCCTCAACTTCCAGGGAAGAACAAGCATTTaGCGGAATGGATTGTTCCACAAGATTTTCTTTTTC +
Preference number: 6 (lower is better)
Translates to: YGCLNFQGRTSI*RNGLFHKIFFF
Trigger: GAAAAAGAAAATCTTGTGGAACAATCCATTCCGTCAAATGCTTGTTCTTCCCTGGAAGTTGAGGCAGCCATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS GCA 72 bp TATCTGTTAGGGGTTCGTTTATGGAAGTCTTCAACTTaGTGTGCAAGGGGCACATATGTAGAAACTGTTTCA +
Preference number: 6 (lower is better)
Translates to: YLLGVRLWKSST*CARGTYVETVS
Trigger: TGAAACAGTTTCTACATATGTGCCCCTTGCACAGCAAGTTGAAGACTTCCATAAACGAACCCCTAACAGATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS CAA 72 bp AGTGTTGTCAACTGGTTTCAAAGGTGTGACAATAGCTaGCTGAAGATTAGCCTTTCTCAAAGGAGTTTTGCC +
Preference number: 6 (lower is better)
Translates to: SVVNWFQRCDNS*LKISLSQRSFA
Trigger: GGCAAAACTCCTTTGAGAAAGGCTAATCTTCAGCAAGCTATTGTCACACCTTTGAAACCAGTTGACAACACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS CAA 72 bp ATATCTGTTAGGGGTTCGTTTATGGAAGTCTTCAACTaGCTGTGCAAGGGGCACATATGTAGAAACTGTTTC +
Preference number: 6 (lower is better)
Translates to: ISVRGSFMEVFN*LCKGHICRNCF
Trigger: GAAACAGTTTCTACATATGTGCCCCTTGCACAGCAAGTTGAAGACTTCCATAAACGAACCCCTAACAGATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS CAA 90 bp CCTCAAATGATATCTGTTAGGGGTTCGTTTATGGAAGTCTTCAACTaGCTGTGCAAGGGGCACATATGTAGAAACTGTTTCATCAAATGT +
Preference number: 6 (lower is better)
Translates to: PQMISVRGSFMEVFN*LCKGHICRNCFIKC
Trigger: ACATTTGATGAAACAGTTTCTACATATGTGCCCCTTGCACAGCAAGTTGAAGACTTCCATAAACGAACCCCTAACAGATATCATTTGAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS TCA 72 bp GACCCTGTCTTAATATCATCCTTCTTGCTCCTCAAATaGTATCTGTTAGGGGTTCGTTTATGGAAGTCTTCA +
Preference number: 6 (lower is better)
Translates to: DPVLISSFLLLK*YLLGVRLWKSS
Trigger: TGAAGACTTCCATAAACGAACCCCTAACAGATATCATTTGAGGAGCAAGAAGGATGATATTAAGACAGGGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340513.4
CDS CAA 72 bp ATATGGCTGCCTCAACTTCCAGGGAAGAACAAGCATTaGACGGAATGGATTGTTCCACAAGATTTTCTTTTT +
Preference number: 6 (lower is better)
Translates to: IWLPQLPGKNKH*TEWIVPQDFLF
Trigger: AAAAAGAAAATCTTGTGGAACAATCCATTCCGTCAAATGCTTGTTCTTCCCTGGAAGTTGAGGCAGCCATAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS CAA 90 bp TTTGTAGTAAGTGTTGTCAACTGGTTTCAAAGGTGTGACAATAGCTaGCTGAAGATTAGCCTTTCTCAAAGGAGTTTTGCCCTGAAAAAG +
Preference number: 6 (lower is better)
Translates to: FVVSVVNWFQRCDNS*LKISLSQRSFALKK
Trigger: CTTTTTCAGGGCAAAACTCCTTTGAGAAAGGCTAATCTTCAGCAAGCTATTGTCACACCTTTGAAACCAGTTGACAACACTTACTACAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS CCA 72 bp AGTTCAGATGTAAAGTTCACTTCCTTATATTCCTCCTaGTTCTTAGGATGTTGTTTGATTCGCTCATCTGTG +
Preference number: 6 (lower is better)
Translates to: SSDVKFTSLYSS*FLGCCLIRSSV
Trigger: CACAGATGAGCGAATCAAACAACATCCTAAGAACCAGGAGGAATATAAGGAAGTGAACTTTACATCTGAACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS TCA 72 bp GACTCAAAGTTGCAATCTTCTCTTTCACCCCTTTTCTaGAATCTTGAAGTCTGGCAAATATGTATCAAGAAC +
Preference number: 6 (lower is better)
Translates to: DSKLQSSLSPLF*NLEVWQICIKN
Trigger: GTTCTTGATACATATTTGCCAGACTTCAAGATTTCAGAAAAGGGGTGAAAGAGAAGATTGCAACTTTGAGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4
CDS TCA 72 bp AAATTGGCCTTCTCCTCAAACCATGAATCTATGTTTTaGGTATCTCCTTCATCATCCAAGGATGAAAAATTG +
Preference number: 6 (lower is better)
Translates to: KLAFSSNHESMF*VSPSSSKDEKL
Trigger: CAATTTTTCATCCTTGGATGATGAAGGAGATACTCAAAACATAGATTCATGGTTTGAGGAGAAGGCCAATTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300403.11
ENST00000340513.4