RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TPT1 (Homo sapiens)

Ensembl gene IDs: ENSG00000133112

Ensembl transcript IDs: ENST00000309246.9, ENST00000379055.5, ENST00000442760.2, ENST00000490277.1, ENST00000530245.5, ENST00000530705.6, ENST00000533567.5, ENST00000616577.4

Found 303 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CCTGTGGTGCCCAGGCTGGCCTCTAACAATCCTACCTCAGCCTTCTaGGTACAAGTGCAGTGGGAGCACCTCTTAATTACCTTTGTTGGT +
Preference number: 1 (lower is better)
Translates to: PVVPRLASNNPTSAF*VQVQWEHLLITFVG
Trigger: ACCAACAAAGGTAATTAAGAGGTGCTCCCACTGCACTTGTACTCAGAAGGCTGAGGTAGGATTGTTAGAGGCCAGCCTGGGCACCACAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
3UTR GCA 90 bp CAGCAACTAGTGAGACTGAGGTGGGAAAATGGCTTGAGCACAGGATaGAGAGAATGCAGTGAGTTGCTTGTGCCACTGCACTACAAGCCT +
Preference number: 1 (lower is better)
Translates to: QQLVRLRWENGLSTG*RECSELLVPLHYKP
Trigger: AGGCTTGTAGTGCAGTGGCACAAGCAACTCACTGCATTCTCTGCATCCTGTGCTCAAGCCATTTTCCCACCTCAGTCTCACTAGTTGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
3UTR TCA 90 bp TCTCTCACCTCAAGGCCTTCTTCACTATCCTGGTTTCCCCAGCTTTaGCCACTGCCTGAAAATTCCCTTCCTGCTATCATTTCAGAGGAC +
Preference number: 1 (lower is better)
Translates to: SLTSRPSSLSWFPQL*PLPENSLPAIISED
Trigger: GTCCTCTGAAATGATAGCAGGAAGGGAATTTTCAGGCAGTGGTCAAAGCTGGGGAAACCAGGATAGTGAAGAAGGCCTTGAGGTGAGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
3UTR CCA 90 bp GTGCTGGGGGTTAACATTAGTATCTGCCTCAGGTTTTGGACACTATaGACAGTCTGGAATTTGACACTAGGGCAAACTCCAGATTGCTCA +
Preference number: 1 (lower is better)
Translates to: VLGVNISICLRFWTL*TVWNLTLGQTPDCS
Trigger: TGAGCAATCTGGAGTTTGCCCTAGTGTCAAATTCCAGACTGTCCATAGTGTCCAAAACCTGAGGCAGATACTAATGTTAACCCCCAGCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
3UTR CCA 90 bp GAACACATCACACTCCAGACTAACTGCTGTTGTCTTGGCCTGGAATaGTTTGTCCTGATATCCACATGGCCTACTTCCACACCTTCATTT +
Preference number: 1 (lower is better)
Translates to: EHITLQTNCCCLGLE*FVLISTWPTSTPSF
Trigger: AAATGAAGGTGTGGAAGTAGGCCATGTGGATATCAGGACAAACCATTCCAGGCCAAGACAACAGCAGTTAGTCTGGAGTGTGATGTGTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
3UTR TCA 90 bp GCTTTTACCCTGCCACCTGGCAGCCAAAGTGATCCTTTAAAAATTTaGGTCATATCATGTAACTCTTCTGCTCAGAGCGCCTGTGGTTTC +
Preference number: 1 (lower is better)
Translates to: AFTLPPGSQSDPLKI*VISCNSSAQSACGF
Trigger: GAAACCACAGGCGCTCTGAGCAGAAGAGTTACATGATATGACTCAAATTTTTAAAGGATCACTTTGGCTGCCAGGTGGCAGGGTAAAAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
3UTR TCA 90 bp AAGAGCACTGAAAGGACAACTGGGGAAATACCTCTTCTGCAGAACTaGAAATCTTCAAAACAAGTTGGAGCAGTGGAGCCCACAAAGTCT +
Preference number: 1 (lower is better)
Translates to: KSTERTTGEIPLLQN*KSSKQVGAVEPTKS
Trigger: AGACTTTGTGGGCTCCACTGCTCCAACTTGTTTTGAAGATTTTCAGTTCTGCAGAAGAGGTATTTCCCCAGTTGTCCTTTCAGTGCTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
3UTR TCA 90 bp CACTCCAGACTAACTGCTGTTGTCTTGGCCTGGAATGGTTTGTCCTaGTATCCACATGGCCTACTTCCACACCTTCATTTGTTTTCAAAT +
Preference number: 1 (lower is better)
Translates to: HSRLTAVVLAWNGLS*YPHGLLPHLHLFSN
Trigger: ATTTGAAAACAAATGAAGGTGTGGAAGTAGGCCATGTGGATATCAGGACAAACCATTCCAGGCCAAGACAACAGCAGTTAGTCTGGAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
3UTR GCA 90 bp ACACTATGGACAGTCTGGAATTTGACACTAGGGCAAACTCCAGATTaGTCAAACCACTACATTCACATGTTCAAGCAGACCAGAGTCACT +
Preference number: 1 (lower is better)
Translates to: TLWTVWNLTLGQTPD*SNHYIHMFKQTRVT
Trigger: AGTGACTCTGGTCTGCTTGAACATGTGAATGTAGTGGTTTGAGCAATCTGGAGTTTGCCCTAGTGTCAAATTCCAGACTGTCCATAGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
3UTR CCA 90 bp GTTAACATTAGTATCTGCCTCAGGTTTTGGACACTATGGACAGTCTaGAATTTGACACTAGGGCAAACTCCAGATTGCTCAAACCACTAC +
Preference number: 1 (lower is better)
Translates to: VNISICLRFWTLWTV*NLTLGQTPDCSNHY
Trigger: GTAGTGGTTTGAGCAATCTGGAGTTTGCCCTAGTGTCAAATTCCAGACTGTCCATAGTGTCCAAAACCTGAGGCAGATACTAATGTTAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
3UTR CCA 90 bp TTAAATAGACATGATAAAATGCTATGTCCCAGCCTTGATTGGATCTaGATGTTGGGAAAACAGCTAAGAGCACTGAAAGGACAACTGGGG +
Preference number: 1 (lower is better)
Translates to: LNRHDKMLCPSLDWI*MLGKQLRALKGQLG
Trigger: CCCCAGTTGTCCTTTCAGTGCTCTTAGCTGTTTTCCCAACATCCAGATCCAATCAAGGCTGGGACATAGCATTTTATCATGTCTATTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
3UTR CCA 90 bp AACTGCTGTTGTCTTGGCCTGGAATGGTTTGTCCTGATATCCACATaGCCTACTTCCACACCTTCATTTGTTTTCAAATGTCACATTACA +
Preference number: 1 (lower is better)
Translates to: NCCCLGLEWFVLIST*PTSTPSFVFKCHIT
Trigger: TGTAATGTGACATTTGAAAACAAATGAAGGTGTGGAAGTAGGCCATGTGGATATCAGGACAAACCATTCCAGGCCAAGACAACAGCAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
3UTR CCA 90 bp CTTCTGAGTACAAGTGCAGTGGGAGCACCTCTTAATTACCTTTGTTaGTTTCTCTTTGTCAACCAATCTCATGTTGGAATGCAGTCTATC +
Preference number: 1 (lower is better)
Translates to: LLSTSAVGAPLNYLC*FLFVNQSHVGMQSI
Trigger: GATAGACTGCATTCCAACATGAGATTGGTTGACAAAGAGAAACCAACAAAGGTAATTAAGAGGTGCTCCCACTGCACTTGTACTCAGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
3UTR TCA 90 bp TCAAAGTCTGAGAAGATTCTACCTGGAATCTTCAAAGGTTTACCATaGGGTAAACAGCTGGGGTTCATCACTTCTGACTTAAATAGACAT +
Preference number: 1 (lower is better)
Translates to: SKSEKILPGIFKGLP*GKQLGFITSDLNRH
Trigger: ATGTCTATTTAAGTCAGAAGTGATGAACCCCAGCTGTTTACCTCATGGTAAACCTTTGAAGATTCCAGGTAGAATCTTCTCAGACTTTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
3UTR-3UTR TCA 90 bp TTTTTCCACCTGACCTCTGGGAGGCCCTCCCTTGGTTCTTACCTCAGGGGCAGTAAAACTTTTTCCACCTaGCCTCTGGGAGGCCCTCCC +
Preference number: 2 (lower is better)
Translates to: FFHLTSGRPSLGSYLRGSKTFST*PLGGPP
Trigger: GGGAGGGCCTCCCAGAGGTCAGGTGGAAAAAGTTTT...ACTGCCCCTGAGGTAAGAACCAAGGGAGGGCCTCCCAGAGGTCAGGTGGAAAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
3UTR-3UTR TCA 90 bp AGGTTTGTTTCCAATCACGGGGTGCTGGGGGTTAACATTAGTATCTGCCTCAGGGTGGGCAGATCTCCTTaGGCCCAGGAGTTGAGACCA +
Preference number: 2 (lower is better)
Translates to: RFVSNHGVLGVNISICLRVGRSP*AQELRP
Trigger: TGGTCTCAACTCCTGGGCTCAAGGAGATCTGCCCAC...CCTGAGGCAGATACTAATGTTAACCCCCAGCACCCCGTGATTGGAAACAAACCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
3UTR-3UTR GCA 90 bp AAACTTTTTCCACCTGACCTCTGGGAGGCCCTCCCTTGGTTCTTACCTCAGGGGTCTATGCTTTTACCCTaGCACCTGGCAGCCAAAGTG +
Preference number: 2 (lower is better)
Translates to: KLFPPDLWEALPWFLPQGSMLLP*HLAAKV
Trigger: CACTTTGGCTGCCAGGTGGCAGGGTAAAAGCATAGA...CCCCTGAGGTAAGAACCAAGGGAGGGCCTCCCAGAGGTCAGGTGGAAAAAGTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
3UTR-3UTR TCA 90 bp CCATCCTCTCAGCTCAGCCGCCTGAGTAGCTGGGACTACAGATGCCCAATTAATACTCTGCTCATGCACTaGCAACAGCCACAGTCAATC +
Preference number: 2 (lower is better)
Translates to: PSSQLSRLSSWDYRCPINTLLMH*QQPQSI
Trigger: GATTGACTGTGGCTGTTGTCAGTGCATGAGCAGAGT...ATTAATTGGGCATCTGTAGTCCCAGCTACTCAGGCGGCTGAGCTGAGAGGATGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
3UTR-3UTR TCA 90 bp CCATCCTCTCAGCTCAGCCGCCTGAGTAGCTGGGACTACAGATGCCCAATTAATGGTGGGAAAATGGCTTaGGCACAGGATGCAGAGAAT +
Preference number: 2 (lower is better)
Translates to: PSSQLSRLSSWDYRCPINGGKMA*AQDAEN
Trigger: ATTCTCTGCATCCTGTGCTCAAGCCATTTTCCCACC...ATTAATTGGGCATCTGTAGTCCCAGCTACTCAGGCGGCTGAGCTGAGAGGATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
3UTR-3UTR TCA 90 bp TTTTTCCACCTGACCTCTGGGAGGCCCTCCCTTGGTTCTTACCTCAGGGGCAGTTTCAAAGGTTTACCATaGGGTAAACAGCTGGGGTTC +
Preference number: 2 (lower is better)
Translates to: FFHLTSGRPSLGSYLRGSFKGLP*GKQLGF
Trigger: GAACCCCAGCTGTTTACCTCATGGTAAACCTTTGAA...ACTGCCCCTGAGGTAAGAACCAAGGGAGGGCCTCCCAGAGGTCAGGTGGAAAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
3UTR-3UTR CCA 90 bp CCATCCTCTCAGCTCAGCCGCCTGAGTAGCTGGGACTACAGATGCCCAATTAATGTCCTGATATCCACATaGCCTACTTCCACACCTTCA +
Preference number: 2 (lower is better)
Translates to: PSSQLSRLSSWDYRCPINVLIST*PTSTPS
Trigger: TGAAGGTGTGGAAGTAGGCCATGTGGATATCAGGAC...ATTAATTGGGCATCTGTAGTCCCAGCTACTCAGGCGGCTGAGCTGAGAGGATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
3UTR-3UTR TCA 90 bp TCTGCAGAACTGAAAATCTTCAAAACAAGTTGGAGCAGTGGAGCCCACAAAGTCGTGGGCAGATCTCCTTaGGCCCAGGAGTTGAGACCA +
Preference number: 2 (lower is better)
Translates to: SAELKIFKTSWSSGAHKVVGRSP*AQELRP
Trigger: TGGTCTCAACTCCTGGGCTCAAGGAGATCTGCCCAC...GACTTTGTGGGCTCCACTGCTCCAACTTGTTTTGAAGATTTTCAGTTCTGCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
3UTR-3UTR CCA 90 bp TCACAGCTCACTGCACCCTCAATCTCTCGGACTCAAGCCATCCTCTCAGCTCAGATGAGCCATGGTTCCTaGCTAAATTTTAGAGATGGG +
Preference number: 2 (lower is better)
Translates to: SQLTAPSISRTQAILSAQMSHGS*LNFRDG
Trigger: CCCATCTCTAAAATTTAGCCAGGAACCATGGCTCAT...CTGAGCTGAGAGGATGGCTTGAGTCCGAGAGATTGAGGGTGCAGTGAGCTGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
3UTR-3UTR TCA 90 bp TTTTTCCACCTGACCTCTGGGAGGCCCTCCCTTGGTTCTTACCTCAGGGGCAGTCAAAGTTGCTTCCACTaGATGAGTCTCTTTTTATTC +
Preference number: 2 (lower is better)
Translates to: FFHLTSGRPSLGSYLRGSQSCFH*MSLFLF
Trigger: GAATAAAAAGAGACTCATTCAGTGGAAGCAACTTTG...ACTGCCCCTGAGGTAAGAACCAAGGGAGGGCCTCCCAGAGGTCAGGTGGAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
3UTR-3UTR TCA 90 bp AAACTTTTTCCACCTGACCTCTGGGAGGCCCTCCCTTGGTTCTTACCTCAGGGGACAGTCTTCAAAGTCTaGGAAGATTCTACCTGGAAT +
Preference number: 2 (lower is better)
Translates to: KLFPPDLWEALPWFLPQGTVFKV*EDSTWN
Trigger: ATTCCAGGTAGAATCTTCTCAGACTTTGAAGACTGT...CCCCTGAGGTAAGAACCAAGGGAGGGCCTCCCAGAGGTCAGGTGGAAAAAGTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
3UTR-3UTR TCA 90 bp AAACTTTTTCCACCTGACCTCTGGGAGGCCCTCCCTTGGTTCTTACCTCAGGGGACCTGGCAGCCAAAGTaGTCCTTTAAAAATTTGAGT +
Preference number: 2 (lower is better)
Translates to: KLFPPDLWEALPWFLPQGTWQPK*SFKNLS
Trigger: ACTCAAATTTTTAAAGGATCACTTTGGCTGCCAGGT...CCCCTGAGGTAAGAACCAAGGGAGGGCCTCCCAGAGGTCAGGTGGAAAAAGTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
3UTR-3UTR GCA 90 bp CTGTTGACTACTTCCTCCTTCCTAAAACTTTTTCCACCTGACCTCTGGGAGGCCACAGGATGCAGAGAATaGAGTGAGTTGCTTGTGCCA +
Preference number: 2 (lower is better)
Translates to: LLTTSSFLKLFPPDLWEATGCRE*SELLVP
Trigger: TGGCACAAGCAACTCACTGCATTCTCTGCATCCTGT...GGCCTCCCAGAGGTCAGGTGGAAAAAGTTTTAGGAAGGAGGAAGTAGTCAACAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
3UTR-3UTR GCA 90 bp CTGCTGTTGTCTTGGCCTGGAATGGTTTGTCCTGATATCCACATGGCCTACTTCACAGGATGCAGAGAATaGAGTGAGTTGCTTGTGCCA +
Preference number: 2 (lower is better)
Translates to: LLLSWPGMVCPDIHMAYFTGCRE*SELLVP
Trigger: TGGCACAAGCAACTCACTGCATTCTCTGCATCCTGT...GAAGTAGGCCATGTGGATATCAGGACAAACCATTCCAGGCCAAGACAACAGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
3UTR-3UTR CCA 90 bp CCATCCTCTCAGCTCAGCCGCCTGAGTAGCTGGGACTACAGATGCCCAATTAATAGGTTTTGGACACTATaGACAGTCTGGAATTTGACA +
Preference number: 2 (lower is better)
Translates to: PSSQLSRLSSWDYRCPINRFWTL*TVWNLT
Trigger: TGTCAAATTCCAGACTGTCCATAGTGTCCAAAACCT...ATTAATTGGGCATCTGTAGTCCCAGCTACTCAGGCGGCTGAGCTGAGAGGATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
3UTR-3UTR TCA 90 bp CCATCCTCTCAGCTCAGCCGCCTGAGTAGCTGGGACTACAGATGCCCAATTAATTTCGCTCTCTTTATGTaGAATAAGCTGAGACAAAGT +
Preference number: 2 (lower is better)
Translates to: PSSQLSRLSSWDYRCPINFALFM*NKLRQS
Trigger: ACTTTGTCTCAGCTTATTTCACATAAAGAGAGCGAA...ATTAATTGGGCATCTGTAGTCCCAGCTACTCAGGCGGCTGAGCTGAGAGGATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
3UTR-3UTR TCA 90 bp GACCTTCCTAGAAAAGTCCTCTTGCTCCACTCAGTTGTTCTCCACACTTTAACAATGCAGAGAATGCAGTaGGTTGCTTGTGCCACTGCA +
Preference number: 2 (lower is better)
Translates to: DLPRKVLLLHSVVLHTLTMQRMQ*VACATA
Trigger: TGCAGTGGCACAAGCAACTCACTGCATTCTCTGCAT...TGTTAAAGTGTGGAGAACAACTGAGTGGAGCAAGAGGACTTTTCTAGGAAGGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
3UTR-3UTR CCA 90 bp AGGTTTGTTTCCAATCACGGGGTGCTGGGGGTTAACATTAGTATCTGCCTCAGGACACTATGGACAGTCTaGAATTTGACACTAGGGCAA +
Preference number: 2 (lower is better)
Translates to: RFVSNHGVLGVNISICLRTLWTV*NLTLGQ
Trigger: TTGCCCTAGTGTCAAATTCCAGACTGTCCATAGTGT...CCTGAGGCAGATACTAATGTTAACCCCCAGCACCCCGTGATTGGAAACAAACCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
3UTR CAA 90 bp GACACTATGGACAGTCTGGAATTTGACACTAGGGCAAACTCCAGATaGCTCAAACCACTACATTCACATGTTCAAGCAGACCAGAGTCAC +
Preference number: 2 (lower is better)
Translates to: DTMDSLEFDTRANSR*LKPLHSHVQADQSH
Trigger: GTGACTCTGGTCTGCTTGAACATGTGAATGTAGTGGTTTGAGCAATCTGGAGTTTGCCCTAGTGTCAAATTCCAGACTGTCCATAGTGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
3UTR-3UTR TCA 90 bp AACTGCTGTTGTCTTGGCCTGGAATGGTTTGTCCTGATATCCACATGGCCTACTAGCCCACAAAGTCTCTaGATTGCTACTTGTCTGTTT +
Preference number: 2 (lower is better)
Translates to: NCCCLGLEWFVLISTWPTSPQSL*IATCLF
Trigger: AAACAGACAAGTAGCAATTCAGAGACTTTGTGGGCT...AGTAGGCCATGTGGATATCAGGACAAACCATTCCAGGCCAAGACAACAGCAGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
3UTR-3UTR TCA 90 bp GTTCACATCCTTATTCTTGCCCAAAACGTCTTGACCCTAGGAATAACGAGAAAAGCTATGTCCCAGCCTTaGTTGGATCTGGATGTTGGG +
Preference number: 2 (lower is better)
Translates to: VHILILAQNVLTLGITRKAMSQP*LDLDVG
Trigger: CCCAACATCCAGATCCAATCAAGGCTGGGACATAGC...TTTTCTCGTTATTCCTAGGGTCAAGACGTTTTGGGCAAGAATAAGGATGTGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
3UTR-3UTR CCA 90 bp AACTGCTGTTGTCTTGGCCTGGAATGGTTTGTCCTGATATCCACATGGCCTACTAGTGTACAAAACAGGTaGTCAGATAGGCTAGTTTGC +
Preference number: 2 (lower is better)
Translates to: NCCCLGLEWFVLISTWPTSVQNR*SDRLVC
Trigger: GCAAACTAGCCTATCTGACCACCTGTTTTGTACACT...AGTAGGCCATGTGGATATCAGGACAAACCATTCCAGGCCAAGACAACAGCAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
3UTR-3UTR CCA 90 bp GACCTTCCTAGAAAAGTCCTCTTGCTCCACTCAGTTGTTCTCCACACTTTAACAATCTGCCTCAGGTTTTaGACACTATGGACAGTCTGG +
Preference number: 2 (lower is better)
Translates to: DLPRKVLLLHSVVLHTLTICLRF*TLWTVW
Trigger: CCAGACTGTCCATAGTGTCCAAAACCTGAGGCAGAT...TGTTAAAGTGTGGAGAACAACTGAGTGGAGCAAGAGGACTTTTCTAGGAAGGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
3UTR-3UTR CCA 90 bp AACTGCTGTTGTCTTGGCCTGGAATGGTTTGTCCTGATATCCACATGGCCTACTATCTTCAAAACAAGTTaGAGCAGTGGAGCCCACAAA +
Preference number: 2 (lower is better)
Translates to: NCCCLGLEWFVLISTWPTIFKTS*SSGAHK
Trigger: TTTGTGGGCTCCACTGCTCCAACTTGTTTTGAAGAT...AGTAGGCCATGTGGATATCAGGACAAACCATTCCAGGCCAAGACAACAGCAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
3UTR-3UTR TCA 90 bp AACTGCTGTTGTCTTGGCCTGGAATGGTTTGTCCTGATATCCACATGGCCTACTCAGTCAATCCATAAATaGATAAGCATAGCCACGTTC +
Preference number: 2 (lower is better)
Translates to: NCCCLGLEWFVLISTWPTQSIHK*ISIATF
Trigger: GAACGTGGCTATGCTTATTCATTTATGGATTGACTG...AGTAGGCCATGTGGATATCAGGACAAACCATTCCAGGCCAAGACAACAGCAGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
3UTR-3UTR TCA 90 bp CTGCTGTTGTCTTGGCCTGGAATGGTTTGTCCTGATATCCACATGGCCTACTTCCCTCTTCTGCAGAACTaGAAATCTTCAAAACAAGTT +
Preference number: 2 (lower is better)
Translates to: LLLSWPGMVCPDIHMAYFPLLQN*KSSKQV
Trigger: AACTTGTTTTGAAGATTTTCAGTTCTGCAGAAGAGG...GAAGTAGGCCATGTGGATATCAGGACAAACCATTCCAGGCCAAGACAACAGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
3UTR-3UTR GCA 90 bp GGAATGCAGTCTATCCTCTCTCCAAATGACCTTATCCTGTATCATGGCTTTCAAACACAACTCTGCTCATaGACTGACAACAGCCACAGT +
Preference number: 2 (lower is better)
Translates to: GMQSILSPNDLILYHGFQTQLCS*TDNSHS
Trigger: ACTGTGGCTGTTGTCAGTGCATGAGCAGAGTTGTGT...TTGAAAGCCATGATACAGGATAAGGTCATTTGGAGAGAGGATAGACTGCATTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
3UTR-3UTR GCA 90 bp CACACTTTAACAAACCCTAGGGCCCACAGGCTACTAAAGCATGCCTTTGTTAAACTAGAAAAGTCCTCTTaGTCCACTCAGTTGTTCTCC +
Preference number: 2 (lower is better)
Translates to: HTLTNPRAHRLLKHAFVKLEKSS*STQLFS
Trigger: GGAGAACAACTGAGTGGAGCAAGAGGACTTTTCTAG...TTTAACAAAGGCATGCTTTAGTAGCCTGTGGGCCCTAGGGTTTGTTAAAGTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
3UTR-3UTR CCA 90 bp GACCTTCCTAGAAAAGTCCTCTTGCTCCACTCAGTTGTTCTCCACACTTTAACATGTCCCAGCCTTGATTaGATCTGGATGTTGGGAAAA +
Preference number: 2 (lower is better)
Translates to: DLPRKVLLLHSVVLHTLTCPSLD*IWMLGK
Trigger: TTTTCCCAACATCCAGATCCAATCAAGGCTGGGACA...TGTTAAAGTGTGGAGAACAACTGAGTGGAGCAAGAGGACTTTTCTAGGAAGGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
3UTR-3UTR CCA 90 bp AAGTACTTTGCAACAGGTAACCCTGTTGACTACTTCCTCCTTCCTAAAACTTTTAGCCGCCTGAGTAGCTaGGACTACAGATGCCCAATT +
Preference number: 2 (lower is better)
Translates to: KYFATGNPVDYFLLPKTFSRLSS*DYRCPI
Trigger: AATTGGGCATCTGTAGTCCCAGCTACTCAGGCGGCT...AAAAGTTTTAGGAAGGAGGAAGTAGTCAACAGGGTTACCTGTTGCAAAGTACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
3UTR CAA 90 bp CAAGTGCAGTGGGAGCACCTCTTAATTACCTTTGTTGGTTTCTCTTaGTCAACCAATCTCATGTTGGAATGCAGTCTATCCTCTCTCCAA +
Preference number: 2 (lower is better)
Translates to: QVQWEHLLITFVGFS*STNLMLECSLSSLQ
Trigger: TTGGAGAGAGGATAGACTGCATTCCAACATGAGATTGGTTGACAAAGAGAAACCAACAAAGGTAATTAAGAGGTGCTCCCACTGCACTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
3UTR-3UTR TCA 90 bp ATTGCTCAAACCACTACATTCACATGTTCAAGCAGACCAGAGTCACTGGCCTGCTTATGTGAAATAAGCTaGGACAAAGTTGCTTCCACT +
Preference number: 2 (lower is better)
Translates to: IAQTTTFTCSSRPESLACLCEIS*DKVAST
Trigger: AGTGGAAGCAACTTTGTCTCAGCTTATTTCACATAA...GCAGGCCAGTGACTCTGGTCTGCTTGAACATGTGAATGTAGTGGTTTGAGCAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
3UTR-3UTR TCA 90 bp AAGTACTTTGCAACAGGTAACCCTGTTGACTACTTCCTCCTTCCTAAAACTTTTACTCTGCTCATGCACTaGCAACAGCCACAGTCAATC +
Preference number: 2 (lower is better)
Translates to: KYFATGNPVDYFLLPKTFTLLMH*QQPQSI
Trigger: GATTGACTGTGGCTGTTGTCAGTGCATGAGCAGAGT...AAAAGTTTTAGGAAGGAGGAAGTAGTCAACAGGGTTACCTGTTGCAAAGTACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
3UTR-3UTR GCA 90 bp TTGTCAACCAATCTCATGTTGGAATGCAGTCTATCCTCTCTCCAAATGACCTTAACACAACTCTGCTCATaGACTGACAACAGCCACAGT +
Preference number: 2 (lower is better)
Translates to: LSTNLMLECSLSSLQMTLTQLCS*TDNSHS
Trigger: ACTGTGGCTGTTGTCAGTGCATGAGCAGAGTTGTGT...TAAGGTCATTTGGAGAGAGGATAGACTGCATTCCAACATGAGATTGGTTGACAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
3UTR-3UTR GCA 90 bp GGGTTAACATTAGTATCTGCCTCAGGTTTTGGACACTATGGACAGTCTGGAATTGGGCAAACTCCAGATTaGTCAAACCACTACATTCAC +
Preference number: 2 (lower is better)
Translates to: GLTLVSASGFGHYGQSGIGQTPD*SNHYIH
Trigger: GTGAATGTAGTGGTTTGAGCAATCTGGAGTTTGCCC...AATTCCAGACTGTCCATAGTGTCCAAAACCTGAGGCAGATACTAATGTTAACCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
3UTR-3UTR GCA 90 bp TTCAAATGTCACATTACAAGGACCTTCCTAGAAAAGTCCTCTTGCTCCACTCAGGGGCAAACTCCAGATTaGTCAAACCACTACATTCAC +
Preference number: 2 (lower is better)
Translates to: FKCHITRTFLEKSSCSTQGQTPD*SNHYIH
Trigger: GTGAATGTAGTGGTTTGAGCAATCTGGAGTTTGCCC...CTGAGTGGAGCAAGAGGACTTTTCTAGGAAGGTCCTTGTAATGTGACATTTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
3UTR-3UTR GCA 90 bp AACTGCTGTTGTCTTGGCCTGGAATGGTTTGTCCTGATATCCACATGGCCTACTGGGAAATACCTCTTCTaGAGAACTGAAAATCTTCAA +
Preference number: 2 (lower is better)
Translates to: NCCCLGLEWFVLISTWPTGKYLF*RTENLQ
Trigger: TTGAAGATTTTCAGTTCTGCAGAAGAGGTATTTCCC...AGTAGGCCATGTGGATATCAGGACAAACCATTCCAGGCCAAGACAACAGCAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
3UTR-3UTR CCA 90 bp TTGTCAACCAATCTCATGTTGGAATGCAGTCTATCCTCTCTCCAAATGACCTTACTAGTGAGACTGAGGTaGGAAAATGGCTTGAGCACA +
Preference number: 2 (lower is better)
Translates to: LSTNLMLECSLSSLQMTLLVRLR*ENGLST
Trigger: TGTGCTCAAGCCATTTTCCCACCTCAGTCTCACTAG...TAAGGTCATTTGGAGAGAGGATAGACTGCATTCCAACATGAGATTGGTTGACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
3UTR-3UTR CCA 90 bp TTGTCAACCAATCTCATGTTGGAATGCAGTCTATCCTCTCTCCAAATGACCTTACCAATCACGGGGTGCTaGGGGTTAACATTAGTATCT +
Preference number: 2 (lower is better)
Translates to: LSTNLMLECSLSSLQMTLPITGC*GLTLVS
Trigger: AGATACTAATGTTAACCCCCAGCACCCCGTGATTGG...TAAGGTCATTTGGAGAGAGGATAGACTGCATTCCAACATGAGATTGGTTGACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
3UTR-3UTR CCA 90 bp TTAAATCCATCCTCACCCACCAGCATATCCTGTTGTCTCTATCTTCATTTCCTAGTCCTGATATCCACATaGCCTACTTCCACACCTTCA +
Preference number: 2 (lower is better)
Translates to: LNPSSPTSISCCLYLHFLVLIST*PTSTPS
Trigger: TGAAGGTGTGGAAGTAGGCCATGTGGATATCAGGAC...TAGGAAATGAAGATAGAGACAACAGGATATGCTGGTGGGTGAGGATGGATTTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
3UTR CAA 90 bp TATCAGGCCTCATATTACTTAAGTACTTTGCAACAGGTAACCCTGTaGACTACTTCCTCCTTCCTAAAACTTTTTCCACCTGACCTCTGG +
Preference number: 2 (lower is better)
Translates to: YQASYYLSTLQQVTL*TTSSFLKLFPPDLW
Trigger: CCAGAGGTCAGGTGGAAAAAGTTTTAGGAAGGAGGAAGTAGTCAACAGGGTTACCTGTTGCAAAGTACTTAAGTAATATGAGGCCTGATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
3UTR-3UTR TCA 90 bp CAGGTTTTGGACACTATGGACAGTCTGGAATTTGACACTAGGGCAAACTCCAGATTCGCTCTCTTTATGTaGAATAAGCTGAGACAAAGT +
Preference number: 2 (lower is better)
Translates to: QVLDTMDSLEFDTRANSRFALFM*NKLRQS
Trigger: ACTTTGTCTCAGCTTATTTCACATAAAGAGAGCGAA...TCTGGAGTTTGCCCTAGTGTCAAATTCCAGACTGTCCATAGTGTCCAAAACCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
3UTR-3UTR TCA 90 bp ACAAAATGTTATGAGCTTTCTGATGTTCACATCCTTATTCTTGCCCAAAACGTCGGTGGGAAAATGGCTTaGGCACAGGATGCAGAGAAT +
Preference number: 2 (lower is better)
Translates to: TKCYELSDVHILILAQNVGGKMA*AQDAEN
Trigger: ATTCTCTGCATCCTGTGCTCAAGCCATTTTCCCACC...GACGTTTTGGGCAAGAATAAGGATGTGAACATCAGAAAGCTCATAACATTTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
3UTR-3UTR GCA 90 bp AGTCAAGTTTACCACTATCAGGCCTCATATTACTTAAGTACTTTGCAACAGGTAGGCTTGAGCACAGGATaGAGAGAATGCAGTGAGTTG +
Preference number: 2 (lower is better)
Translates to: SQVYHYQASYYLSTLQQVGLSTG*RECSEL
Trigger: CAACTCACTGCATTCTCTGCATCCTGTGCTCAAGCC...TACCTGTTGCAAAGTACTTAAGTAATATGAGGCCTGATAGTGGTAAACTTGACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
3UTR-3UTR GCA 90 bp GTTCACATCCTTATTCTTGCCCAAAACGTCTTGACCCTAGGAATAACGAGAAAATTTCCAATCACGGGGTaGTGGGGGTTAACATTAGTA +
Preference number: 2 (lower is better)
Translates to: VHILILAQNVLTLGITRKFPITG*WGLTLV
Trigger: TACTAATGTTAACCCCCAGCACCCCGTGATTGGAAA...TTTTCTCGTTATTCCTAGGGTCAAGACGTTTTGGGCAAGAATAAGGATGTGAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
3UTR-3UTR GCA 90 bp AACTGCTGTTGTCTTGGCCTGGAATGGTTTGTCCTGATATCCACATGGCCTACTATAGACATGATAAAATaGTATGTCCCAGCCTTGATT +
Preference number: 2 (lower is better)
Translates to: NCCCLGLEWFVLISTWPTIDMIK*YVPALI
Trigger: AATCAAGGCTGGGACATAGCATTTTATCATGTCTAT...AGTAGGCCATGTGGATATCAGGACAAACCATTCCAGGCCAAGACAACAGCAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
3UTR-3UTR GCA 90 bp AGTCAAGTTTACCACTATCAGGCCTCATATTACTTAAGTACTTTGCAACAGGTACTGGTCTTCCTTCCTTaGACACTCCCACTGCTTTAC +
Preference number: 2 (lower is better)
Translates to: SQVYHYQASYYLSTLQQVLVFLP*TLPLLY
Trigger: GTAAAGCAGTGGGAGTGTGCAAGGAAGGAAGACCAG...TACCTGTTGCAAAGTACTTAAGTAATATGAGGCCTGATAGTGGTAAACTTGACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
3UTR-3UTR CCA 90 bp AAGTACTTTGCAACAGGTAACCCTGTTGACTACTTCCTCCTTCCTAAAACTTTTCTAGTGAGACTGAGGTaGGAAAATGGCTTGAGCACA +
Preference number: 2 (lower is better)
Translates to: KYFATGNPVDYFLLPKTFLVRLR*ENGLST
Trigger: TGTGCTCAAGCCATTTTCCCACCTCAGTCTCACTAG...AAAAGTTTTAGGAAGGAGGAAGTAGTCAACAGGGTTACCTGTTGCAAAGTACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
3UTR-3UTR CCA 90 bp GGAATGCAGTCTATCCTCTCTCCAAATGACCTTATCCTGTATCATGGCTTTCAAATCTTCAAAACAAGTTaGAGCAGTGGAGCCCACAAA +
Preference number: 2 (lower is better)
Translates to: GMQSILSPNDLILYHGFQIFKTS*SSGAHK
Trigger: TTTGTGGGCTCCACTGCTCCAACTTGTTTTGAAGAT...TTGAAAGCCATGATACAGGATAAGGTCATTTGGAGAGAGGATAGACTGCATTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
3UTR-3UTR TCA 90 bp TTGTCAACCAATCTCATGTTGGAATGCAGTCTATCCTCTCTCCAAATGACCTTACAGCTTAGACTTCTCTaGAGAATCAGCATCTCAAAC +
Preference number: 2 (lower is better)
Translates to: LSTNLMLECSLSSLQMTLQLRLL*RISISN
Trigger: GTTTGAGATGCTGATTCTTCAGAGAAGTCTAAGCTG...TAAGGTCATTTGGAGAGAGGATAGACTGCATTCCAACATGAGATTGGTTGACAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
3UTR-3UTR GCA 90 bp GACCTTCCTAGAAAAGTCCTCTTGCTCCACTCAGTTGTTCTCCACACTTTAACAGTTAACATTAGTATCTaGCTCAGGTTTTGGACACTA +
Preference number: 2 (lower is better)
Translates to: DLPRKVLLLHSVVLHTLTVNISI*LRFWTL
Trigger: TAGTGTCCAAAACCTGAGGCAGATACTAATGTTAAC...TGTTAAAGTGTGGAGAACAACTGAGTGGAGCAAGAGGACTTTTCTAGGAAGGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
3UTR-3UTR CCA 90 bp AACATTAGTATCTGCCTCAGGTTTTGGACACTATGGACAGTCTGGAATTTGACAACACTATGGACAGTCTaGAATTTGACACTAGGGCAA +
Preference number: 2 (lower is better)
Translates to: NISICLRFWTLWTVWNLTTLWTV*NLTLGQ
Trigger: TTGCCCTAGTGTCAAATTCCAGACTGTCCATAGTGT...TGTCAAATTCCAGACTGTCCATAGTGTCCAAAACCTGAGGCAGATACTAATGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
3UTR-3UTR CCA 90 bp AACGGTAGTCAAGTTTACCACTATCAGGCCTCATATTACTTAAGTACTTTGCAAATCTGCCTCAGGTTTTaGACACTATGGACAGTCTGG +
Preference number: 2 (lower is better)
Translates to: NGSQVYHYQASYYLSTLQICLRF*TLWTVW
Trigger: CCAGACTGTCCATAGTGTCCAAAACCTGAGGCAGAT...TTGCAAAGTACTTAAGTAATATGAGGCCTGATAGTGGTAAACTTGACTACCGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
3UTR-3UTR TCA 90 bp GGAATGCAGTCTATCCTCTCTCCAAATGACCTTATCCTGTATCATGGCTTTCAATTATGTGAAATAAGCTaGGACAAAGTTGCTTCCACT +
Preference number: 2 (lower is better)
Translates to: GMQSILSPNDLILYHGFQLCEIS*DKVAST
Trigger: AGTGGAAGCAACTTTGTCTCAGCTTATTTCACATAA...TTGAAAGCCATGATACAGGATAAGGTCATTTGGAGAGAGGATAGACTGCATTCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
3UTR-3UTR TCA 90 bp TTGTCAACCAATCTCATGTTGGAATGCAGTCTATCCTCTCTCCAAATGACCTTAAAAAGGCCCTGTAGATaGGACTCACACTTTTCATTA +
Preference number: 2 (lower is better)
Translates to: LSTNLMLECSLSSLQMTLKRPCR*DSHFSL
Trigger: TAATGAAAAGTGTGAGTCTCATCTACAGGGCCTTTT...TAAGGTCATTTGGAGAGAGGATAGACTGCATTCCAACATGAGATTGGTTGACAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
3UTR-3UTR TCA 90 bp GAACTGAAAATCTTCAAAACAAGTTGGAGCAGTGGAGCCCACAAAGTCTCTGAACCTCTTCTGCAGAACTaGAAATCTTCAAAACAAGTT +
Preference number: 2 (lower is better)
Translates to: ELKIFKTSWSSGAHKVSEPLLQN*KSSKQV
Trigger: AACTTGTTTTGAAGATTTTCAGTTCTGCAGAAGAGG...TTCAGAGACTTTGTGGGCTCCACTGCTCCAACTTGTTTTGAAGATTTTCAGTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
3UTR-3UTR GCA 90 bp AACGGTAGTCAAGTTTACCACTATCAGGCCTCATATTACTTAAGTACTTTGCAATTTCCAATCACGGGGTaGTGGGGGTTAACATTAGTA +
Preference number: 2 (lower is better)
Translates to: NGSQVYHYQASYYLSTLQFPITG*WGLTLV
Trigger: TACTAATGTTAACCCCCAGCACCCCGTGATTGGAAA...TTGCAAAGTACTTAAGTAATATGAGGCCTGATAGTGGTAAACTTGACTACCGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
3UTR-3UTR GCA 90 bp AGTCAAGTTTACCACTATCAGGCCTCATATTACTTAAGTACTTTGCAACAGGTACTAGAAAAGTCCTCTTaGTCCACTCAGTTGTTCTCC +
Preference number: 2 (lower is better)
Translates to: SQVYHYQASYYLSTLQQVLEKSS*STQLFS
Trigger: GGAGAACAACTGAGTGGAGCAAGAGGACTTTTCTAG...TACCTGTTGCAAAGTACTTAAGTAATATGAGGCCTGATAGTGGTAAACTTGACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
3UTR-3UTR CCA 90 bp ACAAAATGTTATGAGCTTTCTGATGTTCACATCCTTATTCTTGCCCAAAACGTCGCAGACCAGAGTCACTaGCCTGCTTTTAATCTTTCT +
Preference number: 2 (lower is better)
Translates to: TKCYELSDVHILILAQNVADQSH*PAFNLS
Trigger: AGAAAGATTAAAAGCAGGCCAGTGACTCTGGTCTGC...GACGTTTTGGGCAAGAATAAGGATGTGAACATCAGAAAGCTCATAACATTTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
3UTR-3UTR CCA 90 bp TTAAATCCATCCTCACCCACCAGCATATCCTGTTGTCTCTATCTTCATTTCCTAAGGTTTTGGACACTATaGACAGTCTGGAATTTGACA +
Preference number: 2 (lower is better)
Translates to: LNPSSPTSISCCLYLHFLRFWTL*TVWNLT
Trigger: TGTCAAATTCCAGACTGTCCATAGTGTCCAAAACCT...TAGGAAATGAAGATAGAGACAACAGGATATGCTGGTGGGTGAGGATGGATTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
3UTR-3UTR CCA 90 bp AGTCAAGTTTACCACTATCAGGCCTCATATTACTTAAGTACTTTGCAACAGGTACATGAGGTAAACAGCTaGGGTTCATCACTTCTGACT +
Preference number: 2 (lower is better)
Translates to: SQVYHYQASYYLSTLQQVHEVNS*GSSLLT
Trigger: AGTCAGAAGTGATGAACCCCAGCTGTTTACCTCATG...TACCTGTTGCAAAGTACTTAAGTAATATGAGGCCTGATAGTGGTAAACTTGACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
3UTR CAA 90 bp CTCTTAATTACCTTTGTTGGTTTCTCTTTGTCAACCAATCTCATGTaGGAATGCAGTCTATCCTCTCTCCAAATGACCTTATCCTGTATC +
Preference number: 2 (lower is better)
Translates to: LLITFVGFSLSTNLM*ECSLSSLQMTLSCI
Trigger: GATACAGGATAAGGTCATTTGGAGAGAGGATAGACTGCATTCCAACATGAGATTGGTTGACAAAGAGAAACCAACAAAGGTAATTAAGAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
3UTR-3UTR TCA 90 bp AACATTAGTATCTGCCTCAGGTTTTGGACACTATGGACAGTCTGGAATTTGACACAAAGTTGCTTCCACTaGATGAGTCTCTTTTTATTC +
Preference number: 2 (lower is better)
Translates to: NISICLRFWTLWTVWNLTQSCFH*MSLFLF
Trigger: GAATAAAAAGAGACTCATTCAGTGGAAGCAACTTTG...TGTCAAATTCCAGACTGTCCATAGTGTCCAAAACCTGAGGCAGATACTAATGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
3UTR-3UTR TCA 90 bp AAGTACTTTGCAACAGGTAACCCTGTTGACTACTTCCTCCTTCCTAAAACTTTTCAGTCAATCCATAAATaGATAAGCATAGCCACGTTC +
Preference number: 2 (lower is better)
Translates to: KYFATGNPVDYFLLPKTFQSIHK*ISIATF
Trigger: GAACGTGGCTATGCTTATTCATTTATGGATTGACTG...AAAAGTTTTAGGAAGGAGGAAGTAGTCAACAGGGTTACCTGTTGCAAAGTACTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
3UTR-3UTR TCA 90 bp AAGTACTTTGCAACAGGTAACCCTGTTGACTACTTCCTCCTTCCTAAAACTTTTAAAAGGCCCTGTAGATaGGACTCACACTTTTCATTA +
Preference number: 2 (lower is better)
Translates to: KYFATGNPVDYFLLPKTFKRPCR*DSHFSL
Trigger: TAATGAAAAGTGTGAGTCTCATCTACAGGGCCTTTT...AAAAGTTTTAGGAAGGAGGAAGTAGTCAACAGGGTTACCTGTTGCAAAGTACTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
3UTR-3UTR TCA 90 bp AGTCAAGTTTACCACTATCAGGCCTCATATTACTTAAGTACTTTGCAACAGGTACAGCTTAGACTTCTCTaGAGAATCAGCATCTCAAAC +
Preference number: 2 (lower is better)
Translates to: SQVYHYQASYYLSTLQQVQLRLL*RISISN
Trigger: GTTTGAGATGCTGATTCTTCAGAGAAGTCTAAGCTG...TACCTGTTGCAAAGTACTTAAGTAATATGAGGCCTGATAGTGGTAAACTTGACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
3UTR-3UTR GCA 90 bp GTTCACATCCTTATTCTTGCCCAAAACGTCTTGACCCTAGGAATAACGAGAAAAGTTAACATTAGTATCTaGCTCAGGTTTTGGACACTA +
Preference number: 2 (lower is better)
Translates to: VHILILAQNVLTLGITRKVNISI*LRFWTL
Trigger: TAGTGTCCAAAACCTGAGGCAGATACTAATGTTAAC...TTTTCTCGTTATTCCTAGGGTCAAGACGTTTTGGGCAAGAATAAGGATGTGAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
3UTR-3UTR CCA 90 bp AACGGTAGTCAAGTTTACCACTATCAGGCCTCATATTACTTAAGTACTTTGCAAAGTGTACAAAACAGGTaGTCAGATAGGCTAGTTTGC +
Preference number: 2 (lower is better)
Translates to: NGSQVYHYQASYYLSTLQSVQNR*SDRLVC
Trigger: GCAAACTAGCCTATCTGACCACCTGTTTTGTACACT...TTGCAAAGTACTTAAGTAATATGAGGCCTGATAGTGGTAAACTTGACTACCGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
3UTR-3UTR CCA 90 bp AGTCAAGTTTACCACTATCAGGCCTCATATTACTTAAGTACTTTGCAACAGGTACAACCAATCTCATGTTaGAATGCAGTCTATCCTCTC +
Preference number: 2 (lower is better)
Translates to: SQVYHYQASYYLSTLQQVQPISC*NAVYPL
Trigger: GAGAGGATAGACTGCATTCCAACATGAGATTGGTTG...TACCTGTTGCAAAGTACTTAAGTAATATGAGGCCTGATAGTGGTAAACTTGACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
3UTR-3UTR TCA 90 bp AACTGTACTTTATTATGCCCCATCTGCACTCAACGTTTTCCACAAATAAGATTCGAAACACAATTCTCTTaGTCCCCAAAGAGAAAACTA +
Preference number: 2 (lower is better)
Translates to: NCTLLCPICTQRFPQIRFETQFS*SPKRKL
Trigger: TAGTTTTCTCTTTGGGGATCAAGAGAATTGTGTTTC...GAATCTTATTTGTGGAAAACGTTGAGTGCAGATGGGGCATAATAAAGTACAGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000309246.9
3UTR-3UTR CAA 90 bp TCACAGCTCACTGCACCCTCAATCTCTCGGACTCAAGCCATCCTCTCAGCTCAGAACATTTTTACCCCTTaGCCCACCAGCCAGCCCACA +
Preference number: 3 (lower is better)
Translates to: SQLTAPSISRTQAILSAQNIFTP*PTSQPT
Trigger: TGTGGGCTGGCTGGTGGGCAAAGGGGTAAAAATGTT...CTGAGCTGAGAGGATGGCTTGAGTCCGAGAGATTGAGGGTGCAGTGAGCTGTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
3UTR CCA 72 bp GCATGCCTGCAGTCCCAGCAACTAGTGAGACTGAGGTaGGAAAATGGCTTGAGCACAGGATGCAGAGAATGC +
Preference number: 3 (lower is better)
Translates to: ACLQSQQLVRLR*ENGLSTGCREC
Trigger: GCATTCTCTGCATCCTGTGCTCAAGCCATTTTCCCACCTCAGTCTCACTAGTTGCTGGGACTGCAGGCATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
3UTR-3UTR CAA 90 bp GCCCAGGAGTTGAGACCACCCTGGGCAACTAAGCGATACTCGGTCTCTACAAAAAACATTTTTACCCCTTaGCCCACCAGCCAGCCCACA +
Preference number: 3 (lower is better)
Translates to: AQELRPPWATKRYSVSTKNIFTP*PTSQPT
Trigger: TGTGGGCTGGCTGGTGGGCAAAGGGGTAAAAATGTT...TTTTGTAGAGACCGAGTATCGCTTAGTTGCCCAGGGTGGTCTCAACTCCTGGGC
53% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
3UTR-3UTR CAA 90 bp AAACTTTTTCCACCTGACCTCTGGGAGGCCCTCCCTTGGTTCTTACCTCAGGGGAATGCAGTGAGTTGCTaGTGCCACTGCACTACAAGC +
Preference number: 3 (lower is better)
Translates to: KLFPPDLWEALPWFLPQGNAVSC*CHCTTS
Trigger: GCTTGTAGTGCAGTGGCACAAGCAACTCACTGCATT...CCCCTGAGGTAAGAACCAAGGGAGGGCCTCCCAGAGGTCAGGTGGAAAAAGTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
3UTR-3UTR CAA 90 bp CTGTTGACTACTTCCTCCTTCCTAAAACTTTTTCCACCTGACCTCTGGGAGGCCGCGCCTGTGGTTTCCTaGAGGTCTGGTCTTCCTTCC +
Preference number: 3 (lower is better)
Translates to: LLTTSSFLKLFPPDLWEAAPVVS*RSGLPS
Trigger: GGAAGGAAGACCAGACCTCAAGGAAACCACAGGCGC...GGCCTCCCAGAGGTCAGGTGGAAAAAGTTTTAGGAAGGAGGAAGTAGTCAACAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
3UTR TCA 72 bp GGAAAATGGCTTGAGCACAGGATGCAGAGAATGCAGTaGGTTGCTTGTGCCACTGCACTACAAGCCTGGGTG +
Preference number: 3 (lower is better)
Translates to: GKWLEHRMQRMQ*VACATALQAWV
Trigger: CACCCAGGCTTGTAGTGCAGTGGCACAAGCAACTCACTGCATTCTCTGCATCCTGTGCTCAAGCCATTTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
3UTR GCA 72 bp GTGAGACTGAGGTGGGAAAATGGCTTGAGCACAGGATaGAGAGAATGCAGTGAGTTGCTTGTGCCACTGCAC +
Preference number: 3 (lower is better)
Translates to: VRLRWENGLSTG*RECSELLVPLH
Trigger: GTGCAGTGGCACAAGCAACTCACTGCATTCTCTGCATCCTGTGCTCAAGCCATTTTCCCACCTCAGTCTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
3UTR TCA 72 bp TCCCAACACTTTAGAAGGCCAAAGCTTGAGATCACTTaGGGCCAGAGTTTTCAGACCAGCCTGGGCCACATG +
Preference number: 3 (lower is better)
Translates to: SQHFRRPKLEIT*GQSFQTSLGHM
Trigger: CATGTGGCCCAGGCTGGTCTGAAAACTCTGGCCTCAAGTGATCTCAAGCTTTGGCCTTCTAAAGTGTTGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
3UTR TCA 72 bp CTCTCGGACTCAAGCCATCCTCTCAGCTCAGCCGCCTaGGTAGCTGGGACTACAGATGCCCAATTAATTTTT +
Preference number: 3 (lower is better)
Translates to: LSDSSHPLSSAA*VAGTTDAQLIF
Trigger: AAAAATTAATTGGGCATCTGTAGTCCCAGCTACTCAGGCGGCTGAGCTGAGAGGATGGCTTGAGTCCGAGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
3UTR GCA 72 bp AGGTGGGAAAATGGCTTGAGCACAGGATGCAGAGAATaGAGTGAGTTGCTTGTGCCACTGCACTACAAGCCT +
Preference number: 3 (lower is better)
Translates to: RWENGLSTGCRE*SELLVPLHYKP
Trigger: AGGCTTGTAGTGCAGTGGCACAAGCAACTCACTGCATTCTCTGCATCCTGTGCTCAAGCCATTTTCCCACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
3UTR-3UTR CAA 90 bp GGAATGCAGTCTATCCTCTCTCCAAATGACCTTATCCTGTATCATGGCTTTCAAGGTGGGCAGATCTCCTaGAGCCCAGGAGTTGAGACC +
Preference number: 3 (lower is better)
Translates to: GMQSILSPNDLILYHGFQGGQIS*SPGVET
Trigger: GGTCTCAACTCCTGGGCTCAAGGAGATCTGCCCACC...TTGAAAGCCATGATACAGGATAAGGTCATTTGGAGAGAGGATAGACTGCATTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
3UTR-3UTR CAA 90 bp TCACAGCTCACTGCACCCTCAATCTCTCGGACTCAAGCCATCCTCTCAGCTCAGTCAACCAATCTCATGTaGGAATGCAGTCTATCCTCT +
Preference number: 3 (lower is better)
Translates to: SQLTAPSISRTQAILSAQSTNLM*ECSLSS
Trigger: AGAGGATAGACTGCATTCCAACATGAGATTGGTTGA...CTGAGCTGAGAGGATGGCTTGAGTCCGAGAGATTGAGGGTGCAGTGAGCTGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
3UTR TCA 72 bp GTTGACTACTTCCTCCTTCCTAAAACTTTTTCCACCTaGCCTCTGGGAGGCCCTCCCTTGGTTCTTACCTCA +
Preference number: 3 (lower is better)
Translates to: VDYFLLPKTFST*PLGGPPLVLTS
Trigger: TGAGGTAAGAACCAAGGGAGGGCCTCCCAGAGGTCAGGTGGAAAAAGTTTTAGGAAGGAGGAAGTAGTCAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
3UTR-3UTR CAA 90 bp GACCTTCCTAGAAAAGTCCTCTTGCTCCACTCAGTTGTTCTCCACACTTTAACAAGGTGGGAAAATGGCTaGAGCACAGGATGCAGAGAA +
Preference number: 3 (lower is better)
Translates to: DLPRKVLLLHSVVLHTLTRWENG*STGCRE
Trigger: TTCTCTGCATCCTGTGCTCAAGCCATTTTCCCACCT...TGTTAAAGTGTGGAGAACAACTGAGTGGAGCAAGAGGACTTTTCTAGGAAGGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
3UTR-3UTR CAA 90 bp ACAAAATGTTATGAGCTTTCTGATGTTCACATCCTTATTCTTGCCCAAAACGTCGGTGGGCAGATCTCCTaGAGCCCAGGAGTTGAGACC +
Preference number: 3 (lower is better)
Translates to: TKCYELSDVHILILAQNVGGQIS*SPGVET
Trigger: GGTCTCAACTCCTGGGCTCAAGGAGATCTGCCCACC...GACGTTTTGGGCAAGAATAAGGATGTGAACATCAGAAAGCTCATAACATTTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
3UTR TCA 72 bp CTAACTGCTGTTGTCTTGGCCTGGAATGGTTTGTCCTaGTATCCACATGGCCTACTTCCACACCTTCATTTG +
Preference number: 3 (lower is better)
Translates to: LTAVVLAWNGLS*YPHGLLPHLHL
Trigger: CAAATGAAGGTGTGGAAGTAGGCCATGTGGATATCAGGACAAACCATTCCAGGCCAAGACAACAGCAGTTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
3UTR-3UTR CAA 90 bp TTCAAATGTCACATTACAAGGACCTTCCTAGAAAAGTCCTCTTGCTCCACTCAGAATGCAGTGAGTTGCTaGTGCCACTGCACTACAAGC +
Preference number: 3 (lower is better)
Translates to: FKCHITRTFLEKSSCSTQNAVSC*CHCTTS
Trigger: GCTTGTAGTGCAGTGGCACAAGCAACTCACTGCATT...CTGAGTGGAGCAAGAGGACTTTTCTAGGAAGGTCCTTGTAATGTGACATTTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
3UTR-3UTR CAA 90 bp GGAATGCAGTCTATCCTCTCTCCAAATGACCTTATCCTGTATCATGGCTTTCAAAGAGAATGCAGTGAGTaGCTTGTGCCACTGCACTAC +
Preference number: 3 (lower is better)
Translates to: GMQSILSPNDLILYHGFQRECSE*LVPLHY
Trigger: GTAGTGCAGTGGCACAAGCAACTCACTGCATTCTCT...TTGAAAGCCATGATACAGGATAAGGTCATTTGGAGAGAGGATAGACTGCATTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
3UTR CCA 72 bp AGTATCTGCCTCAGGTTTTGGACACTATGGACAGTCTaGAATTTGACACTAGGGCAAACTCCAGATTGCTCA +
Preference number: 3 (lower is better)
Translates to: SICLRFWTLWTV*NLTLGQTPDCS
Trigger: TGAGCAATCTGGAGTTTGCCCTAGTGTCAAATTCCAGACTGTCCATAGTGTCCAAAACCTGAGGCAGATACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
3UTR-3UTR CAA 90 bp GAACTGAAAATCTTCAAAACAAGTTGGAGCAGTGGAGCCCACAAAGTCTCTGAATGGACAGTCTGGAATTaGACACTAGGGCAAACTCCA +
Preference number: 3 (lower is better)
Translates to: ELKIFKTSWSSGAHKVSEWTVWN*TLGQTP
Trigger: TGGAGTTTGCCCTAGTGTCAAATTCCAGACTGTCCA...TTCAGAGACTTTGTGGGCTCCACTGCTCCAACTTGTTTTGAAGATTTTCAGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
3UTR-3UTR CAA 90 bp TTAAATCCATCCTCACCCACCAGCATATCCTGTTGTCTCTATCTTCATTTCCTATGCTATGTCCCAGCCTaGATTGGATCTGGATGTTGG +
Preference number: 3 (lower is better)
Translates to: LNPSSPTSISCCLYLHFLCYVPA*IGSGCW
Trigger: CCAACATCCAGATCCAATCAAGGCTGGGACATAGCA...TAGGAAATGAAGATAGAGACAACAGGATATGCTGGTGGGTGAGGATGGATTTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
3UTR-3UTR CAA 90 bp TTCAAATGTCACATTACAAGGACCTTCCTAGAAAAGTCCTCTTGCTCCACTCAGCTTGCCCAAAACGTCTaGACCCTAGGAATAACGAGA +
Preference number: 3 (lower is better)
Translates to: FKCHITRTFLEKSSCSTQLAQNV*TLGITR
Trigger: TCTCGTTATTCCTAGGGTCAAGACGTTTTGGGCAAG...CTGAGTGGAGCAAGAGGACTTTTCTAGGAAGGTCCTTGTAATGTGACATTTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
3UTR-3UTR CAA 90 bp TTAAATCCATCCTCACCCACCAGCATATCCTGTTGTCTCTATCTTCATTTCCTATATCTGCCTCAGGTTTaGGACACTATGGACAGTCTG +
Preference number: 3 (lower is better)
Translates to: LNPSSPTSISCCLYLHFLYLPQV*DTMDSL
Trigger: CAGACTGTCCATAGTGTCCAAAACCTGAGGCAGATA...TAGGAAATGAAGATAGAGACAACAGGATATGCTGGTGGGTGAGGATGGATTTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
3UTR-3UTR CAA 90 bp TGCAGAACTGAAAATCTTCAAAACAAGTTGGAGCAGTGGAGCCCACAAAGTCTCAATACGTATTTAGGTTaGTTTCCAATCACGGGGTGC +
Preference number: 3 (lower is better)
Translates to: CRTENLQNKLEQWSPQSLNTYLG*FPITGC
Trigger: GCACCCCGTGATTGGAAACAAACCTAAATACGTATT...GAGACTTTGTGGGCTCCACTGCTCCAACTTGTTTTGAAGATTTTCAGTTCTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
3UTR-3UTR CAA 90 bp GGAATGCAGTCTATCCTCTCTCCAAATGACCTTATCCTGTATCATGGCTTTCAAAATCTTCAAAACAAGTaGGAGCAGTGGAGCCCACAA +
Preference number: 3 (lower is better)
Translates to: GMQSILSPNDLILYHGFQNLQNK*EQWSPQ
Trigger: TTGTGGGCTCCACTGCTCCAACTTGTTTTGAAGATT...TTGAAAGCCATGATACAGGATAAGGTCATTTGGAGAGAGGATAGACTGCATTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
3UTR CCA 72 bp GTTAACATTAGTATCTGCCTCAGGTTTTGGACACTATaGACAGTCTGGAATTTGACACTAGGGCAAACTCCA +
Preference number: 3 (lower is better)
Translates to: VNISICLRFWTL*TVWNLTLGQTP
Trigger: TGGAGTTTGCCCTAGTGTCAAATTCCAGACTGTCCATAGTGTCCAAAACCTGAGGCAGATACTAATGTTAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
3UTR CCA 72 bp ACCTCTTCTGCAGAACTGAAAATCTTCAAAACAAGTTaGAGCAGTGGAGCCCACAAAGTCTCTGAATTGCTA +
Preference number: 3 (lower is better)
Translates to: TSSAELKIFKTS*SSGAHKVSELL
Trigger: TAGCAATTCAGAGACTTTGTGGGCTCCACTGCTCCAACTTGTTTTGAAGATTTTCAGTTCTGCAGAAGAGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
3UTR CCA 72 bp TGTCTTGGCCTGGAATGGTTTGTCCTGATATCCACATaGCCTACTTCCACACCTTCATTTGTTTTCAAATGT +
Preference number: 3 (lower is better)
Translates to: CLGLEWFVLIST*PTSTPSFVFKC
Trigger: ACATTTGAAAACAAATGAAGGTGTGGAAGTAGGCCATGTGGATATCAGGACAAACCATTCCAGGCCAAGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
3UTR-3UTR CAA 90 bp ACAAAATGTTATGAGCTTTCTGATGTTCACATCCTTATTCTTGCCCAAAACGTCAGGTGGGAAAATGGCTaGAGCACAGGATGCAGAGAA +
Preference number: 3 (lower is better)
Translates to: TKCYELSDVHILILAQNVRWENG*STGCRE
Trigger: TTCTCTGCATCCTGTGCTCAAGCCATTTTCCCACCT...GACGTTTTGGGCAAGAATAAGGATGTGAACATCAGAAAGCTCATAACATTTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
3UTR-3UTR CAA 90 bp ATTATACACAATTATTCTATGCTTTTACCCTGCCACCTGGCAGCCAAAGTGATCAGGGCAAACTCCAGATaGCTCAAACCACTACATTCA +
Preference number: 3 (lower is better)
Translates to: IIHNYSMLLPCHLAAKVIRANSR*LKPLHS
Trigger: TGAATGTAGTGGTTTGAGCAATCTGGAGTTTGCCCT...GATCACTTTGGCTGCCAGGTGGCAGGGTAAAAGCATAGAATAATTGTGTATAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
3UTR-3UTR CAA 90 bp AACATTAGTATCTGCCTCAGGTTTTGGACACTATGGACAGTCTGGAATTTGACAAGGGCAAACTCCAGATaGCTCAAACCACTACATTCA +
Preference number: 3 (lower is better)
Translates to: NISICLRFWTLWTVWNLTRANSR*LKPLHS
Trigger: TGAATGTAGTGGTTTGAGCAATCTGGAGTTTGCCCT...TGTCAAATTCCAGACTGTCCATAGTGTCCAAAACCTGAGGCAGATACTAATGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
3UTR-3UTR CAA 90 bp TTGTCAACCAATCTCATGTTGGAATGCAGTCTATCCTCTCTCCAAATGACCTTAAATCTTCAAAACAAGTaGGAGCAGTGGAGCCCACAA +
Preference number: 3 (lower is better)
Translates to: LSTNLMLECSLSSLQMTLNLQNK*EQWSPQ
Trigger: TTGTGGGCTCCACTGCTCCAACTTGTTTTGAAGATT...TAAGGTCATTTGGAGAGAGGATAGACTGCATTCCAACATGAGATTGGTTGACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
3UTR-3UTR CAA 90 bp GTTCACATCCTTATTCTTGCCCAAAACGTCTTGACCCTAGGAATAACGAGAAAAGATTGGATCTGGATGTaGGGAAAACAGCTAAGAGCA +
Preference number: 3 (lower is better)
Translates to: VHILILAQNVLTLGITRKDWIWM*GKQLRA
Trigger: TGCTCTTAGCTGTTTTCCCAACATCCAGATCCAATC...TTTTCTCGTTATTCCTAGGGTCAAGACGTTTTGGGCAAGAATAAGGATGTGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
3UTR-3UTR CAA 90 bp AAGTACTTTGCAACAGGTAACCCTGTTGACTACTTCCTCCTTCCTAAAACTTTTCTTGCCCAAAACGTCTaGACCCTAGGAATAACGAGA +
Preference number: 3 (lower is better)
Translates to: KYFATGNPVDYFLLPKTFLAQNV*TLGITR
Trigger: TCTCGTTATTCCTAGGGTCAAGACGTTTTGGGCAAG...AAAAGTTTTAGGAAGGAGGAAGTAGTCAACAGGGTTACCTGTTGCAAAGTACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
3UTR TCA 72 bp GAGAAGATTCTACCTGGAATCTTCAAAGGTTTACCATaGGGTAAACAGCTGGGGTTCATCACTTCTGACTTA +
Preference number: 3 (lower is better)
Translates to: EKILPGIFKGLP*GKQLGFITSDL
Trigger: TAAGTCAGAAGTGATGAACCCCAGCTGTTTACCTCATGGTAAACCTTTGAAGATTCCAGGTAGAATCTTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
3UTR-3UTR CAA 90 bp ACAAAATGTTATGAGCTTTCTGATGTTCACATCCTTATTCTTGCCCAAAACGTCTATCTGCCTCAGGTTTaGGACACTATGGACAGTCTG +
Preference number: 3 (lower is better)
Translates to: TKCYELSDVHILILAQNVYLPQV*DTMDSL
Trigger: CAGACTGTCCATAGTGTCCAAAACCTGAGGCAGATA...GACGTTTTGGGCAAGAATAAGGATGTGAACATCAGAAAGCTCATAACATTTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
3UTR TCA 72 bp CCTGCTATCATTTCAGAGGACAAAAGGCCCTGTAGATaGGACTCACACTTTTCATTACAATGTCAAATCAGA +
Preference number: 3 (lower is better)
Translates to: PAIISEDKRPCR*DSHFSLQCQIR
Trigger: TCTGATTTGACATTGTAATGAAAAGTGTGAGTCTCATCTACAGGGCCTTTTGTCCTCTGAAATGATAGCAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
3UTR-3UTR CAA 90 bp ACAAAATGTTATGAGCTTTCTGATGTTCACATCCTTATTCTTGCCCAAAACGTCCACAAAGTCTCTGAATaGCTACTTGTCTGTTTCAGG +
Preference number: 3 (lower is better)
Translates to: TKCYELSDVHILILAQNVHKVSE*LLVCFR
Trigger: CCTGAAACAGACAAGTAGCAATTCAGAGACTTTGTG...GACGTTTTGGGCAAGAATAAGGATGTGAACATCAGAAAGCTCATAACATTTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
3UTR-3UTR CAA 90 bp AACGGTAGTCAAGTTTACCACTATCAGGCCTCATATTACTTAAGTACTTTGCAATCAACCAATCTCATGTaGGAATGCAGTCTATCCTCT +
Preference number: 3 (lower is better)
Translates to: NGSQVYHYQASYYLSTLQSTNLM*ECSLSS
Trigger: AGAGGATAGACTGCATTCCAACATGAGATTGGTTGA...TTGCAAAGTACTTAAGTAATATGAGGCCTGATAGTGGTAAACTTGACTACCGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
3UTR TCA 72 bp CATAATTATCACCAGTTTAGTTTGCAGTTAAGTTACTaGCAATCCCTGCAGTTCAGAATGACAGAATTTACA +
Preference number: 3 (lower is better)
Translates to: HNYHQFSLQLSY*QSLQFRMTEFT
Trigger: TGTAAATTCTGTCATTCTGAACTGCAGGGATTGTCAGTAACTTAACTGCAAACTAAACTGGTGATAATTATG
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
CDS-3UTR TCA 90 bp AGGTTTGTTTCCAATCACGGGGTGCTGGGGGTTAACATTAGTATCTGCCTCAGGAGCTTAGCACGAGCCTaGAACTCGGAGCGAGCGCGG +
Preference number: 4 (lower is better)
Translates to: RFVSNHGVLGVNISICLRSLARA*NSERAR
Trigger: CCGCGCTCGCTCCGAGTTTCAGGCTCGTGCTAAGCT...CCTGAGGCAGATACTAATGTTAACCCCCAGCACCCCGTGATTGGAAACAAACCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
CDS-3UTR TCA 90 bp TTTTTCCACCTGACCTCTGGGAGGCCCTCCCTTGGTTCTTACCTCAGGGGCAGTGCTATGTCCCAGCCTTaGTTGGATCTGGATGTTGGG +
Preference number: 4 (lower is better)
Translates to: FFHLTSGRPSLGSYLRGSAMSQP*LDLDVG
Trigger: CCCAACATCCAGATCCAATCAAGGCTGGGACATAGC...ACTGCCCCTGAGGTAAGAACCAAGGGAGGGCCTCCCAGAGGTCAGGTGGAAAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
CDS-3UTR TCA 90 bp GCCCAGGAGTTGAGACCACCCTGGGCAACTAAGCGATACTCGGTCTCTACAAAAAAAACTTTTTCCACCTaGCCTCTGGGAGGCCCTCCC +
Preference number: 4 (lower is better)
Translates to: AQELRPPWATKRYSVSTKKTFST*PLGGPP
Trigger: GGGAGGGCCTCCCAGAGGTCAGGTGGAAAAAGTTTT...TTTTGTAGAGACCGAGTATCGCTTAGTTGCCCAGGGTGGTCTCAACTCCTGGGC
54% GC, longest homopolymer 8 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
CDS-3UTR TCA 90 bp CTGTTGACTACTTCCTCCTTCCTAAAACTTTTTCCACCTGACCTCTGGGAGGCCGTGGGCAGATCTCCTTaGGCCCAGGAGTTGAGACCA +
Preference number: 4 (lower is better)
Translates to: LLTTSSFLKLFPPDLWEAVGRSP*AQELRP
Trigger: TGGTCTCAACTCCTGGGCTCAAGGAGATCTGCCCAC...GGCCTCCCAGAGGTCAGGTGGAAAAAGTTTTAGGAAGGAGGAAGTAGTCAACAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
CDS-3UTR CCA 90 bp TTTTTCCACCTGACCTCTGGGAGGCCCTCCCTTGGTTCTTACCTCAGGGGCAGTGTCCTGATATCCACATaGCCTACTTCCACACCTTCA +
Preference number: 4 (lower is better)
Translates to: FFHLTSGRPSLGSYLRGSVLIST*PTSTPS
Trigger: TGAAGGTGTGGAAGTAGGCCATGTGGATATCAGGAC...ACTGCCCCTGAGGTAAGAACCAAGGGAGGGCCTCCCAGAGGTCAGGTGGAAAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
CDS-3UTR TCA 90 bp ACCACACCCAGCCTAAACTGTACTTTATTATGCCCCATCTGCACTCAACGTTTTACTCCCAACCTCAGGTaGTGCACCCACCTCGGCGTC +
Preference number: 4 (lower is better)
Translates to: TTPSLNCTLLCPICTQRFTPNLR*CTHLGV
Trigger: GACGCCGAGGTGGGTGCATCACCTGAGGTTGGGAGT...AAAACGTTGAGTGCAGATGGGGCATAATAAAGTACAGTTTAGGCTGGGTGTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309246.9
CDS-3UTR GCA 90 bp GAACTGAAAATCTTCAAAACAAGTTGGAGCAGTGGAGCCCACAAAGTCTCTGAATACGTCATCGCCCGCTaGGCCTCCGGAAGCGACGCA +
Preference number: 4 (lower is better)
Translates to: ELKIFKTSWSSGAHKVSEYVIAR*ASGSDA
Trigger: TGCGTCGCTTCCGGAGGCGCAGCGGGCGATGACGTA...TTCAGAGACTTTGTGGGCTCCACTGCTCCAACTTGTTTTGAAGATTTTCAGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616577.4
CDS-3UTR TCA 90 bp GAACTGAAAATCTTCAAAACAAGTTGGAGCAGTGGAGCCCACAAAGTCTCTGAAAGCTTAGCACGAGCCTaGAACTCGGAGCGAGCGCGG +
Preference number: 4 (lower is better)
Translates to: ELKIFKTSWSSGAHKVSESLARA*NSERAR
Trigger: CCGCGCTCGCTCCGAGTTTCAGGCTCGTGCTAAGCT...TTCAGAGACTTTGTGGGCTCCACTGCTCCAACTTGTTTTGAAGATTTTCAGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
CDS-3UTR TCA 90 bp AACTGCTGTTGTCTTGGCCTGGAATGGTTTGTCCTGATATCCACATGGCCTACTAAAACTTTTTCCACCTaGCCTCTGGGAGGCCCTCCC +
Preference number: 4 (lower is better)
Translates to: NCCCLGLEWFVLISTWPTKTFST*PLGGPP
Trigger: GGGAGGGCCTCCCAGAGGTCAGGTGGAAAAAGTTTT...AGTAGGCCATGTGGATATCAGGACAAACCATTCCAGGCCAAGACAACAGCAGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
CDS-3UTR GCA 90 bp GAACTGAAAATCTTCAAAACAAGTTGGAGCAGTGGAGCCCACAAAGTCTCTGAAGGGGTCTCCCTGTGGTaGCCAGGCTGGCCTCTAACA +
Preference number: 4 (lower is better)
Translates to: ELKIFKTSWSSGAHKVSEGVSLW*PGWPLT
Trigger: TGTTAGAGGCCAGCCTGGGCACCACAGGGAGACCCC...TTCAGAGACTTTGTGGGCTCCACTGCTCCAACTTGTTTTGAAGATTTTCAGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
CDS-3UTR CCA 90 bp GCCCAGGAGTTGAGACCACCCTGGGCAACTAAGCGATACTCGGTCTCTACAAAACCAATCACGGGGTGCTaGGGGTTAACATTAGTATCT +
Preference number: 4 (lower is better)
Translates to: AQELRPPWATKRYSVSTKPITGC*GLTLVS
Trigger: AGATACTAATGTTAACCCCCAGCACCCCGTGATTGG...TTTTGTAGAGACCGAGTATCGCTTAGTTGCCCAGGGTGGTCTCAACTCCTGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
CDS-3UTR TCA 90 bp AGGTTTGTTTCCAATCACGGGGTGCTGGGGGTTAACATTAGTATCTGCCTCAGGACTCTGCTCATGCACTaGCAACAGCCACAGTCAATC +
Preference number: 4 (lower is better)
Translates to: RFVSNHGVLGVNISICLRTLLMH*QQPQSI
Trigger: GATTGACTGTGGCTGTTGTCAGTGCATGAGCAGAGT...CCTGAGGCAGATACTAATGTTAACCCCCAGCACCCCGTGATTGGAAACAAACCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
CDS-3UTR GCA 90 bp TTAAATCCATCCTCACCCACCAGCATATCCTGTTGTCTCTATCTTCATTTCCTAGGGGTCTCCCTGTGGTaGCCAGGCTGGCCTCTAACA +
Preference number: 4 (lower is better)
Translates to: LNPSSPTSISCCLYLHFLGVSLW*PGWPLT
Trigger: TGTTAGAGGCCAGCCTGGGCACCACAGGGAGACCCC...TAGGAAATGAAGATAGAGACAACAGGATATGCTGGTGGGTGAGGATGGATTTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
CDS-3UTR CCA 90 bp GGGTTAACATTAGTATCTGCCTCAGGTTTTGGACACTATGGACAGTCTGGAATTTGGGAGGCCCTCCCTTaGTTCTTACCTCAGGGGCAG +
Preference number: 4 (lower is better)
Translates to: GLTLVSASGFGHYGQSGIWEALP*FLPQGQ
Trigger: CTGCCCCTGAGGTAAGAACCAAGGGAGGGCCTCCCA...AATTCCAGACTGTCCATAGTGTCCAAAACCTGAGGCAGATACTAATGTTAACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
CDS-3UTR GCA 90 bp ATTGCTCAAACCACTACATTCACATGTTCAAGCAGACCAGAGTCACTGGCCTGCGGCTTGAGCACAGGATaGAGAGAATGCAGTGAGTTG +
Preference number: 4 (lower is better)
Translates to: IAQTTTFTCSSRPESLACGLSTG*RECSEL
Trigger: CAACTCACTGCATTCTCTGCATCCTGTGCTCAAGCC...GCAGGCCAGTGACTCTGGTCTGCTTGAACATGTGAATGTAGTGGTTTGAGCAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
CDS-3UTR CCA 90 bp TTAAATCCATCCTCACCCACCAGCATATCCTGTTGTCTCTATCTTCATTTCCTATGGGAGGCCCTCCCTTaGTTCTTACCTCAGGGGCAG +
Preference number: 4 (lower is better)
Translates to: LNPSSPTSISCCLYLHFLWEALP*FLPQGQ
Trigger: CTGCCCCTGAGGTAAGAACCAAGGGAGGGCCTCCCA...TAGGAAATGAAGATAGAGACAACAGGATATGCTGGTGGGTGAGGATGGATTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
CDS-3UTR CCA 90 bp GGAATGCAGTCTATCCTCTCTCCAAATGACCTTATCCTGTATCATGGCTTTCAATTTCCACCTGACCTCTaGGAGGCCCTCCCTTGGTTC +
Preference number: 4 (lower is better)
Translates to: GMQSILSPNDLILYHGFQFPPDL*EALPWF
Trigger: GAACCAAGGGAGGGCCTCCCAGAGGTCAGGTGGAAA...TTGAAAGCCATGATACAGGATAAGGTCATTTGGAGAGAGGATAGACTGCATTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
CDS-3UTR TCA 90 bp ACCACACCCAGCCTAAACTGTACTTTATTATGCCCCATCTGCACTCAACGTTTTCCTCCCAGGTTTAAGTaGTTTTCCTGCCTCAGGCTC +
Preference number: 4 (lower is better)
Translates to: TTPSLNCTLLCPICTQRFPPRFK*FSCLRL
Trigger: GAGCCTGAGGCAGGAAAATCACTTAAACCTGGGAGG...AAAACGTTGAGTGCAGATGGGGCATAATAAAGTACAGTTTAGGCTGGGTGTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000309246.9
CDS-3UTR TCA 90 bp TTAAATCCATCCTCACCCACCAGCATATCCTGTTGTCTCTATCTTCATTTCCTAGTGGGCAGATCTCCTTaGGCCCAGGAGTTGAGACCA +
Preference number: 4 (lower is better)
Translates to: LNPSSPTSISCCLYLHFLVGRSP*AQELRP
Trigger: TGGTCTCAACTCCTGGGCTCAAGGAGATCTGCCCAC...TAGGAAATGAAGATAGAGACAACAGGATATGCTGGTGGGTGAGGATGGATTTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
CDS-3UTR TCA 90 bp TTGTCAACCAATCTCATGTTGGAATGCAGTCTATCCTCTCTCCAAATGACCTTACTCAGCTCAGCCGCCTaGGTAGCTGGGACTACAGAT +
Preference number: 4 (lower is better)
Translates to: LSTNLMLECSLSSLQMTLLSSAA*VAGTTD
Trigger: ATCTGTAGTCCCAGCTACTCAGGCGGCTGAGCTGAG...TAAGGTCATTTGGAGAGAGGATAGACTGCATTCCAACATGAGATTGGTTGACAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
CDS-3UTR TCA 90 bp GCCCAGGAGTTGAGACCACCCTGGGCAACTAAGCGATACTCGGTCTCTACAAAACCCTGCAGTTCAGAATaGCAGAATTTACATCAACAA +
Preference number: 4 (lower is better)
Translates to: AQELRPPWATKRYSVSTKPCSSE*QNLHQQ
Trigger: TTGTTGATGTAAATTCTGTCATTCTGAACTGCAGGG...TTTTGTAGAGACCGAGTATCGCTTAGTTGCCCAGGGTGGTCTCAACTCCTGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
CDS-3UTR GCA 90 bp AAACTTTTTCCACCTGACCTCTGGGAGGCCCTCCCTTGGTTCTTACCTCAGGGGGGGAAATACCTCTTCTaGAGAACTGAAAATCTTCAA +
Preference number: 4 (lower is better)
Translates to: KLFPPDLWEALPWFLPQGGKYLF*RTENLQ
Trigger: TTGAAGATTTTCAGTTCTGCAGAAGAGGTATTTCCC...CCCCTGAGGTAAGAACCAAGGGAGGGCCTCCCAGAGGTCAGGTGGAAAAAGTTT
48% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
CDS-3UTR GCA 90 bp GGGCAAACTCCAGATTGCTCAAACCACTACATTCACATGTTCAAGCAGACCAGACTGGTCTTCCTTCCTTaGACACTCCCACTGCTTTAC +
Preference number: 4 (lower is better)
Translates to: GQTPDCSNHYIHMFKQTRLVFLP*TLPLLY
Trigger: GTAAAGCAGTGGGAGTGTGCAAGGAAGGAAGACCAG...TCTGGTCTGCTTGAACATGTGAATGTAGTGGTTTGAGCAATCTGGAGTTTGCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
CDS-3UTR TCA 90 bp GCCCAGGAGTTGAGACCACCCTGGGCAACTAAGCGATACTCGGTCTCTACAAAACAAAGTTGCTTCCACTaGATGAGTCTCTTTTTATTC +
Preference number: 4 (lower is better)
Translates to: AQELRPPWATKRYSVSTKQSCFH*MSLFLF
Trigger: GAATAAAAAGAGACTCATTCAGTGGAAGCAACTTTG...TTTTGTAGAGACCGAGTATCGCTTAGTTGCCCAGGGTGGTCTCAACTCCTGGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
CDS-3UTR TCA 90 bp TCTGCAGAACTGAAAATCTTCAAAACAAGTTGGAGCAGTGGAGCCCACAAAGTCATGCAGAGAATGCAGTaGGTTGCTTGTGCCACTGCA +
Preference number: 4 (lower is better)
Translates to: SAELKIFKTSWSSGAHKVMQRMQ*VACATA
Trigger: TGCAGTGGCACAAGCAACTCACTGCATTCTCTGCAT...GACTTTGTGGGCTCCACTGCTCCAACTTGTTTTGAAGATTTTCAGTTCTGCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
CDS-3UTR TCA 90 bp TTAAATCCATCCTCACCCACCAGCATATCCTGTTGTCTCTATCTTCATTTCCTACCTACCTCAGCCTTCTaGGTACAAGTGCAGTGGGAG +
Preference number: 4 (lower is better)
Translates to: LNPSSPTSISCCLYLHFLPTSAF*VQVQWE
Trigger: CTCCCACTGCACTTGTACTCAGAAGGCTGAGGTAGG...TAGGAAATGAAGATAGAGACAACAGGATATGCTGGTGGGTGAGGATGGATTTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
CDS-3UTR GCA 90 bp AACTGTACTTTATTATGCCCCATCTGCACTCAACGTTTTCCACAAATAAGATTCAGCTGGGATTACAGGTaGCCGCTGCCATGCCTGGCT +
Preference number: 4 (lower is better)
Translates to: NCTLLCPICTQRFPQIRFSWDYR*PLPCLA
Trigger: AGCCAGGCATGGCAGCGGGCACCTGTAATCCCAGCT...GAATCTTATTTGTGGAAAACGTTGAGTGCAGATGGGGCATAATAAAGTACAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309246.9
CDS-3UTR GCA 90 bp ATTGCTCAAACCACTACATTCACATGTTCAAGCAGACCAGAGTCACTGGCCTGCCTAGAAAAGTCCTCTTaGTCCACTCAGTTGTTCTCC +
Preference number: 4 (lower is better)
Translates to: IAQTTTFTCSSRPESLACLEKSS*STQLFS
Trigger: GGAGAACAACTGAGTGGAGCAAGAGGACTTTTCTAG...GCAGGCCAGTGACTCTGGTCTGCTTGAACATGTGAATGTAGTGGTTTGAGCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
CDS-3UTR GCA 90 bp TGCAGAACTGAAAATCTTCAAAACAAGTTGGAGCAGTGGAGCCCACAAAGTCTCTCTATGCTTTTACCCTaGCACCTGGCAGCCAAAGTG +
Preference number: 4 (lower is better)
Translates to: CRTENLQNKLEQWSPQSLSMLLP*HLAAKV
Trigger: CACTTTGGCTGCCAGGTGGCAGGGTAAAAGCATAGA...GAGACTTTGTGGGCTCCACTGCTCCAACTTGTTTTGAAGATTTTCAGTTCTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
CDS-3UTR GCA 90 bp TCACAGCTCACTGCACCCTCAATCTCTCGGACTCAAGCCATCCTCTCAGCTCAGTTGGTTGAGATTTATTaGTCGTCTTGCAATTTTACC +
Preference number: 4 (lower is better)
Translates to: SQLTAPSISRTQAILSAQLVEIY*SSCNFT
Trigger: GGTAAAATTGCAAGACGAGCAATAAATCTCAACCAA...CTGAGCTGAGAGGATGGCTTGAGTCCGAGAGATTGAGGGTGCAGTGAGCTGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
CDS-3UTR CCA 90 bp GGGCAAACTCCAGATTGCTCAAACCACTACATTCACATGTTCAAGCAGACCAGACTAGTGAGACTGAGGTaGGAAAATGGCTTGAGCACA +
Preference number: 4 (lower is better)
Translates to: GQTPDCSNHYIHMFKQTRLVRLR*ENGLST
Trigger: TGTGCTCAAGCCATTTTCCCACCTCAGTCTCACTAG...TCTGGTCTGCTTGAACATGTGAATGTAGTGGTTTGAGCAATCTGGAGTTTGCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
CDS-3UTR CCA 90 bp CTGCTGTTGTCTTGGCCTGGAATGGTTTGTCCTGATATCCACATGGCCTACTTCACACTATGGACAGTCTaGAATTTGACACTAGGGCAA +
Preference number: 4 (lower is better)
Translates to: LLLSWPGMVCPDIHMAYFTLWTV*NLTLGQ
Trigger: TTGCCCTAGTGTCAAATTCCAGACTGTCCATAGTGT...GAAGTAGGCCATGTGGATATCAGGACAAACCATTCCAGGCCAAGACAACAGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
CDS-3UTR CCA 90 bp GGGTTAACATTAGTATCTGCCTCAGGTTTTGGACACTATGGACAGTCTGGAATTAGCCGCCTGAGTAGCTaGGACTACAGATGCCCAATT +
Preference number: 4 (lower is better)
Translates to: GLTLVSASGFGHYGQSGISRLSS*DYRCPI
Trigger: AATTGGGCATCTGTAGTCCCAGCTACTCAGGCGGCT...AATTCCAGACTGTCCATAGTGTCCAAAACCTGAGGCAGATACTAATGTTAACCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
CDS-3UTR CCA 90 bp GCCCAGGAGTTGAGACCACCCTGGGCAACTAAGCGATACTCGGTCTCTACAAAAAGTGTTCTCTCAAGTTaGTTGAGATTTATTGCTCGT +
Preference number: 4 (lower is better)
Translates to: AQELRPPWATKRYSVSTKSVLSS*LRFIAR
Trigger: ACGAGCAATAAATCTCAACCAACTTGAGAGAACACT...TTTTGTAGAGACCGAGTATCGCTTAGTTGCCCAGGGTGGTCTCAACTCCTGGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
CDS-3UTR TCA 90 bp AACATTAGTATCTGCCTCAGGTTTTGGACACTATGGACAGTCTGGAATTTGACAGCTATGTCCCAGCCTTaGTTGGATCTGGATGTTGGG +
Preference number: 4 (lower is better)
Translates to: NISICLRFWTLWTVWNLTAMSQP*LDLDVG
Trigger: CCCAACATCCAGATCCAATCAAGGCTGGGACATAGC...TGTCAAATTCCAGACTGTCCATAGTGTCCAAAACCTGAGGCAGATACTAATGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
CDS-3UTR TCA 90 bp AGGTTTGTTTCCAATCACGGGGTGCTGGGGGTTAACATTAGTATCTGCCTCAGGACAGTCTTCAAAGTCTaGGAAGATTCTACCTGGAAT +
Preference number: 4 (lower is better)
Translates to: RFVSNHGVLGVNISICLRTVFKV*EDSTWN
Trigger: ATTCCAGGTAGAATCTTCTCAGACTTTGAAGACTGT...CCTGAGGCAGATACTAATGTTAACCCCCAGCACCCCGTGATTGGAAACAAACCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
CDS-3UTR TCA 90 bp AACTGCTGTTGTCTTGGCCTGGAATGGTTTGTCCTGATATCCACATGGCCTACTCAGCTTAGACTTCTCTaGAGAATCAGCATCTCAAAC +
Preference number: 4 (lower is better)
Translates to: NCCCLGLEWFVLISTWPTQLRLL*RISISN
Trigger: GTTTGAGATGCTGATTCTTCAGAGAAGTCTAAGCTG...AGTAGGCCATGTGGATATCAGGACAAACCATTCCAGGCCAAGACAACAGCAGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
CDS-3UTR TCA 90 bp ACAAAATGTTATGAGCTTTCTGATGTTCACATCCTTATTCTTGCCCAAAACGTCCTCAGCTCAGCCGCCTaGGTAGCTGGGACTACAGAT +
Preference number: 4 (lower is better)
Translates to: TKCYELSDVHILILAQNVLSSAA*VAGTTD
Trigger: ATCTGTAGTCCCAGCTACTCAGGCGGCTGAGCTGAG...GACGTTTTGGGCAAGAATAAGGATGTGAACATCAGAAAGCTCATAACATTTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
CDS-3UTR GCA 90 bp TGCAGAACTGAAAATCTTCAAAACAAGTTGGAGCAGTGGAGCCCACAAAGTCTCACAGGATGCAGAGAATaGAGTGAGTTGCTTGTGCCA +
Preference number: 4 (lower is better)
Translates to: CRTENLQNKLEQWSPQSLTGCRE*SELLVP
Trigger: TGGCACAAGCAACTCACTGCATTCTCTGCATCCTGT...GAGACTTTGTGGGCTCCACTGCTCCAACTTGTTTTGAAGATTTTCAGTTCTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
CDS-3UTR GCA 90 bp CAGGTTTTGGACACTATGGACAGTCTGGAATTTGACACTAGGGCAAACTCCAGAGGGCAAACTCCAGATTaGTCAAACCACTACATTCAC +
Preference number: 4 (lower is better)
Translates to: QVLDTMDSLEFDTRANSRGQTPD*SNHYIH
Trigger: GTGAATGTAGTGGTTTGAGCAATCTGGAGTTTGCCC...TCTGGAGTTTGCCCTAGTGTCAAATTCCAGACTGTCCATAGTGTCCAAAACCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
CDS-3UTR GCA 90 bp CAGGTTTTGGACACTATGGACAGTCTGGAATTTGACACTAGGGCAAACTCCAGATTTCCAATCACGGGGTaGTGGGGGTTAACATTAGTA +
Preference number: 4 (lower is better)
Translates to: QVLDTMDSLEFDTRANSRFPITG*WGLTLV
Trigger: TACTAATGTTAACCCCCAGCACCCCGTGATTGGAAA...TCTGGAGTTTGCCCTAGTGTCAAATTCCAGACTGTCCATAGTGTCCAAAACCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
CDS-3UTR GCA 90 bp TTCAAATGTCACATTACAAGGACCTTCCTAGAAAAGTCCTCTTGCTCCACTCAGATGATCACAGCTCACTaGACCCTCAATCTCTCGGAC +
Preference number: 4 (lower is better)
Translates to: FKCHITRTFLEKSSCSTQMITAH*TLNLSD
Trigger: GTCCGAGAGATTGAGGGTGCAGTGAGCTGTGATCAT...CTGAGTGGAGCAAGAGGACTTTTCTAGGAAGGTCCTTGTAATGTGACATTTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
CDS-3UTR GCA 90 bp GAACTGAAAATCTTCAAAACAAGTTGGAGCAGTGGAGCCCACAAAGTCTCTGAAATGATCACAGCTCACTaGACCCTCAATCTCTCGGAC +
Preference number: 4 (lower is better)
Translates to: ELKIFKTSWSSGAHKVSEMITAH*TLNLSD
Trigger: GTCCGAGAGATTGAGGGTGCAGTGAGCTGTGATCAT...TTCAGAGACTTTGTGGGCTCCACTGCTCCAACTTGTTTTGAAGATTTTCAGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
CDS-3UTR CCA 90 bp CTGCTGTTGTCTTGGCCTGGAATGGTTTGTCCTGATATCCACATGGCCTACTTCAGGTTTTGGACACTATaGACAGTCTGGAATTTGACA +
Preference number: 4 (lower is better)
Translates to: LLLSWPGMVCPDIHMAYFRFWTL*TVWNLT
Trigger: TGTCAAATTCCAGACTGTCCATAGTGTCCAAAACCT...GAAGTAGGCCATGTGGATATCAGGACAAACCATTCCAGGCCAAGACAACAGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
CDS-3UTR CCA 90 bp CACACTTTAACAAACCCTAGGGCCCACAGGCTACTAAAGCATGCCTTTGTTAAACCAATCACGGGGTGCTaGGGGTTAACATTAGTATCT +
Preference number: 4 (lower is better)
Translates to: HTLTNPRAHRLLKHAFVKPITGC*GLTLVS
Trigger: AGATACTAATGTTAACCCCCAGCACCCCGTGATTGG...TTTAACAAAGGCATGCTTTAGTAGCCTGTGGGCCCTAGGGTTTGTTAAAGTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
CDS-3UTR CCA 90 bp AACTGCTGTTGTCTTGGCCTGGAATGGTTTGTCCTGATATCCACATGGCCTACTAGCCTTGATTGGATCTaGATGTTGGGAAAACAGCTA +
Preference number: 4 (lower is better)
Translates to: NCCCLGLEWFVLISTWPTSLDWI*MLGKQL
Trigger: TAGCTGTTTTCCCAACATCCAGATCCAATCAAGGCT...AGTAGGCCATGTGGATATCAGGACAAACCATTCCAGGCCAAGACAACAGCAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
CDS-3UTR CCA 90 bp GGGCAAACTCCAGATTGCTCAAACCACTACATTCACATGTTCAAGCAGACCAGATGTCCCAGCCTTGATTaGATCTGGATGTTGGGAAAA +
Preference number: 4 (lower is better)
Translates to: GQTPDCSNHYIHMFKQTRCPSLD*IWMLGK
Trigger: TTTTCCCAACATCCAGATCCAATCAAGGCTGGGACA...TCTGGTCTGCTTGAACATGTGAATGTAGTGGTTTGAGCAATCTGGAGTTTGCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
CDS-3UTR CCA 90 bp ATTATACACAATTATTCTATGCTTTTACCCTGCCACCTGGCAGCCAAAGTGATCAGCCGCCTGAGTAGCTaGGACTACAGATGCCCAATT +
Preference number: 4 (lower is better)
Translates to: IIHNYSMLLPCHLAAKVISRLSS*DYRCPI
Trigger: AATTGGGCATCTGTAGTCCCAGCTACTCAGGCGGCT...GATCACTTTGGCTGCCAGGTGGCAGGGTAAAAGCATAGAATAATTGTGTATAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
CDS-3UTR CCA 90 bp AACGGTAGTCAAGTTTACCACTATCAGGCCTCATATTACTTAAGTACTTTGCAATTTCCACCTGACCTCTaGGAGGCCCTCCCTTGGTTC +
Preference number: 4 (lower is better)
Translates to: NGSQVYHYQASYYLSTLQFPPDL*EALPWF
Trigger: GAACCAAGGGAGGGCCTCCCAGAGGTCAGGTGGAAA...TTGCAAAGTACTTAAGTAATATGAGGCCTGATAGTGGTAAACTTGACTACCGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
CDS-3UTR TCA 90 bp CTGCTGTTGTCTTGGCCTGGAATGGTTTGTCCTGATATCCACATGGCCTACTTCTTCGCTCTCTTTATGTaGAATAAGCTGAGACAAAGT +
Preference number: 4 (lower is better)
Translates to: LLLSWPGMVCPDIHMAYFFALFM*NKLRQS
Trigger: ACTTTGTCTCAGCTTATTTCACATAAAGAGAGCGAA...GAAGTAGGCCATGTGGATATCAGGACAAACCATTCCAGGCCAAGACAACAGCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
CDS-3UTR TCA 90 bp GTTCACATCCTTATTCTTGCCCAAAACGTCTTGACCCTAGGAATAACGAGAAAAGGTGGGAAAATGGCTTaGGCACAGGATGCAGAGAAT +
Preference number: 4 (lower is better)
Translates to: VHILILAQNVLTLGITRKGGKMA*AQDAEN
Trigger: ATTCTCTGCATCCTGTGCTCAAGCCATTTTCCCACC...TTTTCTCGTTATTCCTAGGGTCAAGACGTTTTGGGCAAGAATAAGGATGTGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
CDS-3UTR TCA 90 bp ATTATACACAATTATTCTATGCTTTTACCCTGCCACCTGGCAGCCAAAGTGATCGGTGGGAAAATGGCTTaGGCACAGGATGCAGAGAAT +
Preference number: 4 (lower is better)
Translates to: IIHNYSMLLPCHLAAKVIGGKMA*AQDAEN
Trigger: ATTCTCTGCATCCTGTGCTCAAGCCATTTTCCCACC...GATCACTTTGGCTGCCAGGTGGCAGGGTAAAAGCATAGAATAATTGTGTATAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
CDS-3UTR TCA 90 bp AACTGCTGTTGTCTTGGCCTGGAATGGTTTGTCCTGATATCCACATGGCCTACTACAGTCTTCAAAGTCTaGGAAGATTCTACCTGGAAT +
Preference number: 4 (lower is better)
Translates to: NCCCLGLEWFVLISTWPTTVFKV*EDSTWN
Trigger: ATTCCAGGTAGAATCTTCTCAGACTTTGAAGACTGT...AGTAGGCCATGTGGATATCAGGACAAACCATTCCAGGCCAAGACAACAGCAGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
CDS-3UTR TCA 90 bp AACTGCTGTTGTCTTGGCCTGGAATGGTTTGTCCTGATATCCACATGGCCTACTACCTGGCAGCCAAAGTaGTCCTTTAAAAATTTGAGT +
Preference number: 4 (lower is better)
Translates to: NCCCLGLEWFVLISTWPTTWQPK*SFKNLS
Trigger: ACTCAAATTTTTAAAGGATCACTTTGGCTGCCAGGT...AGTAGGCCATGTGGATATCAGGACAAACCATTCCAGGCCAAGACAACAGCAGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
CDS-3UTR TCA 90 bp AACGGTAGTCAAGTTTACCACTATCAGGCCTCATATTACTTAAGTACTTTGCAACCTACCTCAGCCTTCTaGGTACAAGTGCAGTGGGAG +
Preference number: 4 (lower is better)
Translates to: NGSQVYHYQASYYLSTLQPTSAF*VQVQWE
Trigger: CTCCCACTGCACTTGTACTCAGAAGGCTGAGGTAGG...TTGCAAAGTACTTAAGTAATATGAGGCCTGATAGTGGTAAACTTGACTACCGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
CDS-3UTR TCA 90 bp ATTGCTCAAACCACTACATTCACATGTTCAAGCAGACCAGAGTCACTGGCCTGCCCCTGCAGTTCAGAATaGCAGAATTTACATCAACAA +
Preference number: 4 (lower is better)
Translates to: IAQTTTFTCSSRPESLACPCSSE*QNLHQQ
Trigger: TTGTTGATGTAAATTCTGTCATTCTGAACTGCAGGG...GCAGGCCAGTGACTCTGGTCTGCTTGAACATGTGAATGTAGTGGTTTGAGCAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
CDS-3UTR TCA 90 bp ATTGCTCAAACCACTACATTCACATGTTCAAGCAGACCAGAGTCACTGGCCTGCTTCTCTCAAGTTGGTTaGGATTTATTGCTCGTCTTG +
Preference number: 4 (lower is better)
Translates to: IAQTTTFTCSSRPESLACFSQVG*DLLLVL
Trigger: CAAGACGAGCAATAAATCTCAACCAACTTGAGAGAA...GCAGGCCAGTGACTCTGGTCTGCTTGAACATGTGAATGTAGTGGTTTGAGCAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
CDS-3UTR GCA 90 bp GAACTGAAAATCTTCAAAACAAGTTGGAGCAGTGGAGCCCACAAAGTCTCTGAAACAGGATGCAGAGAATaGAGTGAGTTGCTTGTGCCA +
Preference number: 4 (lower is better)
Translates to: ELKIFKTSWSSGAHKVSETGCRE*SELLVP
Trigger: TGGCACAAGCAACTCACTGCATTCTCTGCATCCTGT...TTCAGAGACTTTGTGGGCTCCACTGCTCCAACTTGTTTTGAAGATTTTCAGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
CDS-3UTR GCA 90 bp ATTATACACAATTATTCTATGCTTTTACCCTGCCACCTGGCAGCCAAAGTGATCGGCTTGAGCACAGGATaGAGAGAATGCAGTGAGTTG +
Preference number: 4 (lower is better)
Translates to: IIHNYSMLLPCHLAAKVIGLSTG*RECSEL
Trigger: CAACTCACTGCATTCTCTGCATCCTGTGCTCAAGCC...GATCACTTTGGCTGCCAGGTGGCAGGGTAAAAGCATAGAATAATTGTGTATAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
CDS-3UTR GCA 90 bp ATTATACACAATTATTCTATGCTTTTACCCTGCCACCTGGCAGCCAAAGTGATCCTGGTCTTCCTTCCTTaGACACTCCCACTGCTTTAC +
Preference number: 4 (lower is better)
Translates to: IIHNYSMLLPCHLAAKVILVFLP*TLPLLY
Trigger: GTAAAGCAGTGGGAGTGTGCAAGGAAGGAAGACCAG...GATCACTTTGGCTGCCAGGTGGCAGGGTAAAAGCATAGAATAATTGTGTATAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
CDS-3UTR CCA 90 bp GGGCAAACTCCAGATTGCTCAAACCACTACATTCACATGTTCAAGCAGACCAGAATCTTCAAAACAAGTTaGAGCAGTGGAGCCCACAAA +
Preference number: 4 (lower is better)
Translates to: GQTPDCSNHYIHMFKQTRIFKTS*SSGAHK
Trigger: TTTGTGGGCTCCACTGCTCCAACTTGTTTTGAAGAT...TCTGGTCTGCTTGAACATGTGAATGTAGTGGTTTGAGCAATCTGGAGTTTGCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
CDS-3UTR CCA 90 bp TCTGCAGAACTGAAAATCTTCAAAACAAGTTGGAGCAGTGGAGCCCACAAAGTCTGTCCCAGCCTTGATTaGATCTGGATGTTGGGAAAA +
Preference number: 4 (lower is better)
Translates to: SAELKIFKTSWSSGAHKVCPSLD*IWMLGK
Trigger: TTTTCCCAACATCCAGATCCAATCAAGGCTGGGACA...GACTTTGTGGGCTCCACTGCTCCAACTTGTTTTGAAGATTTTCAGTTCTGCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
CDS-3UTR CCA 90 bp TGCAGAACTGAAAATCTTCAAAACAAGTTGGAGCAGTGGAGCCCACAAAGTCTCCATGAGGTAAACAGCTaGGGTTCATCACTTCTGACT +
Preference number: 4 (lower is better)
Translates to: CRTENLQNKLEQWSPQSLHEVNS*GSSLLT
Trigger: AGTCAGAAGTGATGAACCCCAGCTGTTTACCTCATG...GAGACTTTGTGGGCTCCACTGCTCCAACTTGTTTTGAAGATTTTCAGTTCTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
CDS-3UTR CCA 90 bp CAGGTTTTGGACACTATGGACAGTCTGGAATTTGACACTAGGGCAAACTCCAGAATGAGCCATGGTTCCTaGCTAAATTTTAGAGATGGG +
Preference number: 4 (lower is better)
Translates to: QVLDTMDSLEFDTRANSRMSHGS*LNFRDG
Trigger: CCCATCTCTAAAATTTAGCCAGGAACCATGGCTCAT...TCTGGAGTTTGCCCTAGTGTCAAATTCCAGACTGTCCATAGTGTCCAAAACCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
3UTR CAA 72 bp GACAGTCTGGAATTTGACACTAGGGCAAACTCCAGATaGCTCAAACCACTACATTCACATGTTCAAGCAGAC +
Preference number: 4 (lower is better)
Translates to: DSLEFDTRANSR*LKPLHSHVQAD
Trigger: GTCTGCTTGAACATGTGAATGTAGTGGTTTGAGCAATCTGGAGTTTGCCCTAGTGTCAAATTCCAGACTGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
CDS-3UTR TCA 90 bp ATTGCTCAAACCACTACATTCACATGTTCAAGCAGACCAGAGTCACTGGCCTGCCAAAGTTGCTTCCACTaGATGAGTCTCTTTTTATTC +
Preference number: 4 (lower is better)
Translates to: IAQTTTFTCSSRPESLACQSCFH*MSLFLF
Trigger: GAATAAAAAGAGACTCATTCAGTGGAAGCAACTTTG...GCAGGCCAGTGACTCTGGTCTGCTTGAACATGTGAATGTAGTGGTTTGAGCAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
CDS-3UTR TCA 90 bp AAGTACTTTGCAACAGGTAACCCTGTTGACTACTTCCTCCTTCCTAAAACTTTTATGCAGAGAATGCAGTaGGTTGCTTGTGCCACTGCA +
Preference number: 4 (lower is better)
Translates to: KYFATGNPVDYFLLPKTFMQRMQ*VACATA
Trigger: TGCAGTGGCACAAGCAACTCACTGCATTCTCTGCAT...AAAAGTTTTAGGAAGGAGGAAGTAGTCAACAGGGTTACCTGTTGCAAAGTACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
CDS-3UTR GCA 90 bp CAGGTTTTGGACACTATGGACAGTCTGGAATTTGACACTAGGGCAAACTCCAGACTGTATTGTATTTCATaGCTGCGACTGTTAGTCTCT +
Preference number: 4 (lower is better)
Translates to: QVLDTMDSLEFDTRANSRLYCIS*LRLLVS
Trigger: AGAGACTAACAGTCGCAGGCATGAAATACAATACAG...TCTGGAGTTTGCCCTAGTGTCAAATTCCAGACTGTCCATAGTGTCCAAAACCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
CDS-3UTR CCA 90 bp ACCACACCCAGCCTAAACTGTACTTTATTATGCCCCATCTGCACTCAACGTTTTGCCCGCTGCCATGCCTaGCTAATTTTTGTATTTTTA +
Preference number: 4 (lower is better)
Translates to: TTPSLNCTLLCPICTQRFARCHA*LIFVFL
Trigger: TAAAAATACAAAAATTAGCCAGGCATGGCAGCGGGC...AAAACGTTGAGTGCAGATGGGGCATAATAAAGTACAGTTTAGGCTGGGTGTGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000309246.9
CDS-3UTR CCA 90 bp CACACTTTAACAAACCCTAGGGCCCACAGGCTACTAAAGCATGCCTTTGTTAAAAGTGTACAAAACAGGTaGTCAGATAGGCTAGTTTGC +
Preference number: 4 (lower is better)
Translates to: HTLTNPRAHRLLKHAFVKSVQNR*SDRLVC
Trigger: GCAAACTAGCCTATCTGACCACCTGTTTTGTACACT...TTTAACAAAGGCATGCTTTAGTAGCCTGTGGGCCCTAGGGTTTGTTAAAGTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
CDS-3UTR CCA 90 bp ATTATACACAATTATTCTATGCTTTTACCCTGCCACCTGGCAGCCAAAGTGATCGTCCTGATATCCACATaGCCTACTTCCACACCTTCA +
Preference number: 4 (lower is better)
Translates to: IIHNYSMLLPCHLAAKVIVLIST*PTSTPS
Trigger: TGAAGGTGTGGAAGTAGGCCATGTGGATATCAGGAC...GATCACTTTGGCTGCCAGGTGGCAGGGTAAAAGCATAGAATAATTGTGTATAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
CDS-3UTR CCA 90 bp CACACTTTAACAAACCCTAGGGCCCACAGGCTACTAAAGCATGCCTTTGTTAAAATGAGCCATGGTTCCTaGCTAAATTTTAGAGATGGG +
Preference number: 4 (lower is better)
Translates to: HTLTNPRAHRLLKHAFVKMSHGS*LNFRDG
Trigger: CCCATCTCTAAAATTTAGCCAGGAACCATGGCTCAT...TTTAACAAAGGCATGCTTTAGTAGCCTGTGGGCCCTAGGGTTTGTTAAAGTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
CDS-3UTR TCA 90 bp AACATTAGTATCTGCCTCAGGTTTTGGACACTATGGACAGTCTGGAATTTGACATTCAAAGGTTTACCATaGGGTAAACAGCTGGGGTTC +
Preference number: 4 (lower is better)
Translates to: NISICLRFWTLWTVWNLTFKGLP*GKQLGF
Trigger: GAACCCCAGCTGTTTACCTCATGGTAAACCTTTGAA...TGTCAAATTCCAGACTGTCCATAGTGTCCAAAACCTGAGGCAGATACTAATGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
CDS-3UTR TCA 90 bp TTGTCAACCAATCTCATGTTGGAATGCAGTCTATCCTCTCTCCAAATGACCTTATTCAAAGGTTTACCATaGGGTAAACAGCTGGGGTTC +
Preference number: 4 (lower is better)
Translates to: LSTNLMLECSLSSLQMTLFKGLP*GKQLGF
Trigger: GAACCCCAGCTGTTTACCTCATGGTAAACCTTTGAA...TAAGGTCATTTGGAGAGAGGATAGACTGCATTCCAACATGAGATTGGTTGACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
CDS-3UTR TCA 90 bp TTCAAATGTCACATTACAAGGACCTTCCTAGAAAAGTCCTCTTGCTCCACTCAGCAGCTTAGACTTCTCTaGAGAATCAGCATCTCAAAC +
Preference number: 4 (lower is better)
Translates to: FKCHITRTFLEKSSCSTQQLRLL*RISISN
Trigger: GTTTGAGATGCTGATTCTTCAGAGAAGTCTAAGCTG...CTGAGTGGAGCAAGAGGACTTTTCTAGGAAGGTCCTTGTAATGTGACATTTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
CDS-3UTR TCA 90 bp TGCAGAACTGAAAATCTTCAAAACAAGTTGGAGCAGTGGAGCCCACAAAGTCTCTTCTCTCAAGTTGGTTaGGATTTATTGCTCGTCTTG +
Preference number: 4 (lower is better)
Translates to: CRTENLQNKLEQWSPQSLFSQVG*DLLLVL
Trigger: CAAGACGAGCAATAAATCTCAACCAACTTGAGAGAA...GAGACTTTGTGGGCTCCACTGCTCCAACTTGTTTTGAAGATTTTCAGTTCTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
CDS-3UTR GCA 90 bp ACCACACCCAGCCTAAACTGTACTTTATTATGCCCCATCTGCACTCAACGTTTTAACTGTACTTTATTATaGCCCATCTGCACTCAACGT +
Preference number: 4 (lower is better)
Translates to: TTPSLNCTLLCPICTQRFNCTLL*PICTQR
Trigger: ACGTTGAGTGCAGATGGGGCATAATAAAGTACAGTT...AAAACGTTGAGTGCAGATGGGGCATAATAAAGTACAGTTTAGGCTGGGTGTGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309246.9
CDS-3UTR GCA 90 bp TTAAATCCATCCTCACCCACCAGCATATCCTGTTGTCTCTATCTTCATTTCCTATTTCCAATCACGGGGTaGTGGGGGTTAACATTAGTA +
Preference number: 4 (lower is better)
Translates to: LNPSSPTSISCCLYLHFLFPITG*WGLTLV
Trigger: TACTAATGTTAACCCCCAGCACCCCGTGATTGGAAA...TAGGAAATGAAGATAGAGACAACAGGATATGCTGGTGGGTGAGGATGGATTTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
CDS-3UTR CCA 90 bp AACATTAGTATCTGCCTCAGGTTTTGGACACTATGGACAGTCTGGAATTTGACAGCAGACCAGAGTCACTaGCCTGCTTTTAATCTTTCT +
Preference number: 4 (lower is better)
Translates to: NISICLRFWTLWTVWNLTADQSH*PAFNLS
Trigger: AGAAAGATTAAAAGCAGGCCAGTGACTCTGGTCTGC...TGTCAAATTCCAGACTGTCCATAGTGTCCAAAACCTGAGGCAGATACTAATGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
CDS-3UTR CCA 90 bp TTCAAATGTCACATTACAAGGACCTTCCTAGAAAAGTCCTCTTGCTCCACTCAGATCTTCAAAACAAGTTaGAGCAGTGGAGCCCACAAA +
Preference number: 4 (lower is better)
Translates to: FKCHITRTFLEKSSCSTQIFKTS*SSGAHK
Trigger: TTTGTGGGCTCCACTGCTCCAACTTGTTTTGAAGAT...CTGAGTGGAGCAAGAGGACTTTTCTAGGAAGGTCCTTGTAATGTGACATTTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
CDS-3UTR CCA 90 bp ATTATACACAATTATTCTATGCTTTTACCCTGCCACCTGGCAGCCAAAGTGATCCATGAGGTAAACAGCTaGGGTTCATCACTTCTGACT +
Preference number: 4 (lower is better)
Translates to: IIHNYSMLLPCHLAAKVIHEVNS*GSSLLT
Trigger: AGTCAGAAGTGATGAACCCCAGCTGTTTACCTCATG...GATCACTTTGGCTGCCAGGTGGCAGGGTAAAAGCATAGAATAATTGTGTATAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
CDS-3UTR CCA 90 bp TTGTCAACCAATCTCATGTTGGAATGCAGTCTATCCTCTCTCCAAATGACCTTATGTCTTGGCCTGGAATaGTTTGTCCTGATATCCACA +
Preference number: 4 (lower is better)
Translates to: LSTNLMLECSLSSLQMTLCLGLE*FVLIST
Trigger: TGTGGATATCAGGACAAACCATTCCAGGCCAAGACA...TAAGGTCATTTGGAGAGAGGATAGACTGCATTCCAACATGAGATTGGTTGACAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
CDS-3UTR CCA 90 bp GGAATGCAGTCTATCCTCTCTCCAAATGACCTTATCCTGTATCATGGCTTTCAACAACCAATCTCATGTTaGAATGCAGTCTATCCTCTC +
Preference number: 4 (lower is better)
Translates to: GMQSILSPNDLILYHGFQQPISC*NAVYPL
Trigger: GAGAGGATAGACTGCATTCCAACATGAGATTGGTTG...TTGAAAGCCATGATACAGGATAAGGTCATTTGGAGAGAGGATAGACTGCATTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
3UTR CAA 72 bp TGGGAGCACCTCTTAATTACCTTTGTTGGTTTCTCTTaGTCAACCAATCTCATGTTGGAATGCAGTCTATCC +
Preference number: 4 (lower is better)
Translates to: WEHLLITFVGFS*STNLMLECSLS
Trigger: GGATAGACTGCATTCCAACATGAGATTGGTTGACAAAGAGAAACCAACAAAGGTAATTAAGAGGTGCTCCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
CDS-3UTR TCA 90 bp ACCACACCCAGCCTAAACTGTACTTTATTATGCCCCATCTGCACTCAACGTTTTGAAACACAATTCTCTTaGTCCCCAAAGAGAAAACTA +
Preference number: 4 (lower is better)
Translates to: TTPSLNCTLLCPICTQRFETQFS*SPKRKL
Trigger: TAGTTTTCTCTTTGGGGATCAAGAGAATTGTGTTTC...AAAACGTTGAGTGCAGATGGGGCATAATAAAGTACAGTTTAGGCTGGGTGTGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000309246.9
CDS-3UTR TCA 90 bp TCTGCAGAACTGAAAATCTTCAAAACAAGTTGGAGCAGTGGAGCCCACAAAGTCTTCGCTCTCTTTATGTaGAATAAGCTGAGACAAAGT +
Preference number: 4 (lower is better)
Translates to: SAELKIFKTSWSSGAHKVFALFM*NKLRQS
Trigger: ACTTTGTCTCAGCTTATTTCACATAAAGAGAGCGAA...GACTTTGTGGGCTCCACTGCTCCAACTTGTTTTGAAGATTTTCAGTTCTGCAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
CDS-3UTR TCA 90 bp TTCAAATGTCACATTACAAGGACCTTCCTAGAAAAGTCCTCTTGCTCCACTCAGCAGTCAATCCATAAATaGATAAGCATAGCCACGTTC +
Preference number: 4 (lower is better)
Translates to: FKCHITRTFLEKSSCSTQQSIHK*ISIATF
Trigger: GAACGTGGCTATGCTTATTCATTTATGGATTGACTG...CTGAGTGGAGCAAGAGGACTTTTCTAGGAAGGTCCTTGTAATGTGACATTTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
CDS-3UTR TCA 90 bp TTCAAATGTCACATTACAAGGACCTTCCTAGAAAAGTCCTCTTGCTCCACTCAGAAAAGGCCCTGTAGATaGGACTCACACTTTTCATTA +
Preference number: 4 (lower is better)
Translates to: FKCHITRTFLEKSSCSTQKRPCR*DSHFSL
Trigger: TAATGAAAAGTGTGAGTCTCATCTACAGGGCCTTTT...CTGAGTGGAGCAAGAGGACTTTTCTAGGAAGGTCCTTGTAATGTGACATTTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
CDS-3UTR GCA 90 bp ACAAAATGTTATGAGCTTTCTGATGTTCACATCCTTATTCTTGCCCAAAACGTCACACAACTCTGCTCATaGACTGACAACAGCCACAGT +
Preference number: 4 (lower is better)
Translates to: TKCYELSDVHILILAQNVTQLCS*TDNSHS
Trigger: ACTGTGGCTGTTGTCAGTGCATGAGCAGAGTTGTGT...GACGTTTTGGGCAAGAATAAGGATGTGAACATCAGAAAGCTCATAACATTTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
CDS-3UTR GCA 90 bp CAGGTTTTGGACACTATGGACAGTCTGGAATTTGACACTAGGGCAAACTCCAGAATAGACATGATAAAATaGTATGTCCCAGCCTTGATT +
Preference number: 4 (lower is better)
Translates to: QVLDTMDSLEFDTRANSRIDMIK*YVPALI
Trigger: AATCAAGGCTGGGACATAGCATTTTATCATGTCTAT...TCTGGAGTTTGCCCTAGTGTCAAATTCCAGACTGTCCATAGTGTCCAAAACCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
CDS-3UTR GCA 90 bp AAGTACTTTGCAACAGGTAACCCTGTTGACTACTTCCTCCTTCCTAAAACTTTTCTAGAAAAGTCCTCTTaGTCCACTCAGTTGTTCTCC +
Preference number: 4 (lower is better)
Translates to: KYFATGNPVDYFLLPKTFLEKSS*STQLFS
Trigger: GGAGAACAACTGAGTGGAGCAAGAGGACTTTTCTAG...AAAAGTTTTAGGAAGGAGGAAGTAGTCAACAGGGTTACCTGTTGCAAAGTACTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
CDS-3UTR CCA 90 bp GGGTTAACATTAGTATCTGCCTCAGGTTTTGGACACTATGGACAGTCTGGAATTAGGTTTTGGACACTATaGACAGTCTGGAATTTGACA +
Preference number: 4 (lower is better)
Translates to: GLTLVSASGFGHYGQSGIRFWTL*TVWNLT
Trigger: TGTCAAATTCCAGACTGTCCATAGTGTCCAAAACCT...AATTCCAGACTGTCCATAGTGTCCAAAACCTGAGGCAGATACTAATGTTAACCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
CDS-3UTR CCA 90 bp GTTCACATCCTTATTCTTGCCCAAAACGTCTTGACCCTAGGAATAACGAGAAAAAGCCTTGATTGGATCTaGATGTTGGGAAAACAGCTA +
Preference number: 4 (lower is better)
Translates to: VHILILAQNVLTLGITRKSLDWI*MLGKQL
Trigger: TAGCTGTTTTCCCAACATCCAGATCCAATCAAGGCT...TTTTCTCGTTATTCCTAGGGTCAAGACGTTTTGGGCAAGAATAAGGATGTGAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
CDS-3UTR CCA 90 bp ATTATACACAATTATTCTATGCTTTTACCCTGCCACCTGGCAGCCAAAGTGATCCAACCAATCTCATGTTaGAATGCAGTCTATCCTCTC +
Preference number: 4 (lower is better)
Translates to: IIHNYSMLLPCHLAAKVIQPISC*NAVYPL
Trigger: GAGAGGATAGACTGCATTCCAACATGAGATTGGTTG...GATCACTTTGGCTGCCAGGTGGCAGGGTAAAAGCATAGAATAATTGTGTATAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
CDS-3UTR CCA 90 bp GACCTTCCTAGAAAAGTCCTCTTGCTCCACTCAGTTGTTCTCCACACTTTAACAAGTGTTCTCTCAAGTTaGTTGAGATTTATTGCTCGT +
Preference number: 4 (lower is better)
Translates to: DLPRKVLLLHSVVLHTLTSVLSS*LRFIAR
Trigger: ACGAGCAATAAATCTCAACCAACTTGAGAGAACACT...TGTTAAAGTGTGGAGAACAACTGAGTGGAGCAAGAGGACTTTTCTAGGAAGGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
CDS-3UTR TCA 90 bp GAACTGAAAATCTTCAAAACAAGTTGGAGCAGTGGAGCCCACAAAGTCTCTGAATTATGTGAAATAAGCTaGGACAAAGTTGCTTCCACT +
Preference number: 4 (lower is better)
Translates to: ELKIFKTSWSSGAHKVSELCEIS*DKVAST
Trigger: AGTGGAAGCAACTTTGTCTCAGCTTATTTCACATAA...TTCAGAGACTTTGTGGGCTCCACTGCTCCAACTTGTTTTGAAGATTTTCAGTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
CDS-3UTR TCA 90 bp GTTCACATCCTTATTCTTGCCCAAAACGTCTTGACCCTAGGAATAACGAGAAAACAGTCAATCCATAAATaGATAAGCATAGCCACGTTC +
Preference number: 4 (lower is better)
Translates to: VHILILAQNVLTLGITRKQSIHK*ISIATF
Trigger: GAACGTGGCTATGCTTATTCATTTATGGATTGACTG...TTTTCTCGTTATTCCTAGGGTCAAGACGTTTTGGGCAAGAATAAGGATGTGAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
CDS-3UTR TCA 90 bp TTAAATCCATCCTCACCCACCAGCATATCCTGTTGTCTCTATCTTCATTTCCTAAAAAGGCCCTGTAGATaGGACTCACACTTTTCATTA +
Preference number: 4 (lower is better)
Translates to: LNPSSPTSISCCLYLHFLKRPCR*DSHFSL
Trigger: TAATGAAAAGTGTGAGTCTCATCTACAGGGCCTTTT...TAGGAAATGAAGATAGAGACAACAGGATATGCTGGTGGGTGAGGATGGATTTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
CDS-3UTR TCA 90 bp AAGTACTTTGCAACAGGTAACCCTGTTGACTACTTCCTCCTTCCTAAAACTTTTAGCCCACAAAGTCTCTaGATTGCTACTTGTCTGTTT +
Preference number: 4 (lower is better)
Translates to: KYFATGNPVDYFLLPKTFSPQSL*IATCLF
Trigger: AAACAGACAAGTAGCAATTCAGAGACTTTGTGGGCT...AAAAGTTTTAGGAAGGAGGAAGTAGTCAACAGGGTTACCTGTTGCAAAGTACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
CDS-3UTR GCA 90 bp GAACTGAAAATCTTCAAAACAAGTTGGAGCAGTGGAGCCCACAAAGTCTCTGAAGTTAACATTAGTATCTaGCTCAGGTTTTGGACACTA +
Preference number: 4 (lower is better)
Translates to: ELKIFKTSWSSGAHKVSEVNISI*LRFWTL
Trigger: TAGTGTCCAAAACCTGAGGCAGATACTAATGTTAAC...TTCAGAGACTTTGTGGGCTCCACTGCTCCAACTTGTTTTGAAGATTTTCAGTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
CDS-3UTR CCA 90 bp AAACATTACACTGCAAAAGTTACATTACCATTAACATGCAGCCTACATTTCCAGCTAGTGAGACTGAGGTaGGAAAATGGCTTGAGCACA +
Preference number: 4 (lower is better)
Translates to: KHYTAKVTLPLTCSLHFQLVRLR*ENGLST
Trigger: TGTGCTCAAGCCATTTTCCCACCTCAGTCTCACTAG...CTGGAAATGTAGGCTGCATGTTAATGGTAATGTAACTTTTGCAGTGTAATGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616577.4
CDS-3UTR CCA 90 bp AGTCAAGTTTACCACTATCAGGCCTCATATTACTTAAGTACTTTGCAACAGGTAGCAGACCAGAGTCACTaGCCTGCTTTTAATCTTTCT +
Preference number: 4 (lower is better)
Translates to: SQVYHYQASYYLSTLQQVADQSH*PAFNLS
Trigger: AGAAAGATTAAAAGCAGGCCAGTGACTCTGGTCTGC...TACCTGTTGCAAAGTACTTAAGTAATATGAGGCCTGATAGTGGTAAACTTGACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
CDS-3UTR CCA 90 bp AAACATTACACTGCAAAAGTTACATTACCATTAACATGCAGCCTACATTTCCAGATCTGCCTCAGGTTTTaGACACTATGGACAGTCTGG +
Preference number: 4 (lower is better)
Translates to: KHYTAKVTLPLTCSLHFQICLRF*TLWTVW
Trigger: CCAGACTGTCCATAGTGTCCAAAACCTGAGGCAGAT...CTGGAAATGTAGGCTGCATGTTAATGGTAATGTAACTTTTGCAGTGTAATGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616577.4
CDS-3UTR CCA 90 bp ACAAAATGTTATGAGCTTTCTGATGTTCACATCCTTATTCTTGCCCAAAACGTCTGTCTTGGCCTGGAATaGTTTGTCCTGATATCCACA +
Preference number: 4 (lower is better)
Translates to: TKCYELSDVHILILAQNVCLGLE*FVLIST
Trigger: TGTGGATATCAGGACAAACCATTCCAGGCCAAGACA...GACGTTTTGGGCAAGAATAAGGATGTGAACATCAGAAAGCTCATAACATTTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
3UTR CAA 72 bp ACCTTTGTTGGTTTCTCTTTGTCAACCAATCTCATGTaGGAATGCAGTCTATCCTCTCTCCAAATGACCTTA +
Preference number: 4 (lower is better)
Translates to: TFVGFSLSTNLM*ECSLSSLQMTL
Trigger: TAAGGTCATTTGGAGAGAGGATAGACTGCATTCCAACATGAGATTGGTTGACAAAGAGAAACCAACAAAGGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
CDS-3UTR TCA 90 bp TTAAATCCATCCTCACCCACCAGCATATCCTGTTGTCTCTATCTTCATTTCCTACCTCTTCTGCAGAACTaGAAATCTTCAAAACAAGTT +
Preference number: 4 (lower is better)
Translates to: LNPSSPTSISCCLYLHFLPLLQN*KSSKQV
Trigger: AACTTGTTTTGAAGATTTTCAGTTCTGCAGAAGAGG...TAGGAAATGAAGATAGAGACAACAGGATATGCTGGTGGGTGAGGATGGATTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
CDS-3UTR TCA 90 bp AAGTACTTTGCAACAGGTAACCCTGTTGACTACTTCCTCCTTCCTAAAACTTTTACCTGGCAGCCAAAGTaGTCCTTTAAAAATTTGAGT +
Preference number: 4 (lower is better)
Translates to: KYFATGNPVDYFLLPKTFTWQPK*SFKNLS
Trigger: ACTCAAATTTTTAAAGGATCACTTTGGCTGCCAGGT...AAAAGTTTTAGGAAGGAGGAAGTAGTCAACAGGGTTACCTGTTGCAAAGTACTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
CDS-3UTR GCA 90 bp AAGTACTTTGCAACAGGTAACCCTGTTGACTACTTCCTCCTTCCTAAAACTTTTACATTACCATTAACATaGAGCCTACATTTCCAGGCT +
Preference number: 4 (lower is better)
Translates to: KYFATGNPVDYFLLPKTFTLPLT*SLHFQA
Trigger: AGCCTGGAAATGTAGGCTGCATGTTAATGGTAATGT...AAAAGTTTTAGGAAGGAGGAAGTAGTCAACAGGGTTACCTGTTGCAAAGTACTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616577.4
CDS-3UTR GCA 90 bp GGAATGCAGTCTATCCTCTCTCCAAATGACCTTATCCTGTATCATGGCTTTCAATTGGTTGAGATTTATTaGTCGTCTTGCAATTTTACC +
Preference number: 4 (lower is better)
Translates to: GMQSILSPNDLILYHGFQLVEIY*SSCNFT
Trigger: GGTAAAATTGCAAGACGAGCAATAAATCTCAACCAA...TTGAAAGCCATGATACAGGATAAGGTCATTTGGAGAGAGGATAGACTGCATTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
CDS-3UTR TCA 90 bp AAGTACTTTGCAACAGGTAACCCTGTTGACTACTTCCTCCTTCCTAAAACTTTTTTATGTGAAATAAGCTaGGACAAAGTTGCTTCCACT +
Preference number: 4 (lower is better)
Translates to: KYFATGNPVDYFLLPKTFLCEIS*DKVAST
Trigger: AGTGGAAGCAACTTTGTCTCAGCTTATTTCACATAA...AAAAGTTTTAGGAAGGAGGAAGTAGTCAACAGGGTTACCTGTTGCAAAGTACTT
38% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
CDS-3UTR TCA 90 bp AAACATTACACTGCAAAAGTTACATTACCATTAACATGCAGCCTACATTTCCAGAGCCCACAAAGTCTCTaGATTGCTACTTGTCTGTTT +
Preference number: 4 (lower is better)
Translates to: KHYTAKVTLPLTCSLHFQSPQSL*IATCLF
Trigger: AAACAGACAAGTAGCAATTCAGAGACTTTGTGGGCT...CTGGAAATGTAGGCTGCATGTTAATGGTAATGTAACTTTTGCAGTGTAATGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616577.4
CDS-3UTR GCA 90 bp AACTGTACTTTATTATGCCCCATCTGCACTCAACGTTTTCCACAAATAAGATTCTTATTATGCCCCATCTaGACTCAACGTTTTCCACAA +
Preference number: 4 (lower is better)
Translates to: NCTLLCPICTQRFPQIRFLLCPI*TQRFPQ
Trigger: TTGTGGAAAACGTTGAGTGCAGATGGGGCATAATAA...GAATCTTATTTGTGGAAAACGTTGAGTGCAGATGGGGCATAATAAAGTACAGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000309246.9
CDS-3UTR GCA 90 bp AAGTACTTTGCAACAGGTAACCCTGTTGACTACTTCCTCCTTCCTAAAACTTTTGTTAACATTAGTATCTaGCTCAGGTTTTGGACACTA +
Preference number: 4 (lower is better)
Translates to: KYFATGNPVDYFLLPKTFVNISI*LRFWTL
Trigger: TAGTGTCCAAAACCTGAGGCAGATACTAATGTTAAC...AAAAGTTTTAGGAAGGAGGAAGTAGTCAACAGGGTTACCTGTTGCAAAGTACTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
3UTR CAA 72 bp TCATATTACTTAAGTACTTTGCAACAGGTAACCCTGTaGACTACTTCCTCCTTCCTAAAACTTTTTCCACCT +
Preference number: 4 (lower is better)
Translates to: SYYLSTLQQVTL*TTSSFLKLFPP
Trigger: AGGTGGAAAAAGTTTTAGGAAGGAGGAAGTAGTCAACAGGGTTACCTGTTGCAAAGTACTTAAGTAATATGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
CDS-3UTR TCA 90 bp ACAAAATGTTATGAGCTTTCTGATGTTCACATCCTTATTCTTGCCCAAAACGTCCCTCTTCTGCAGAACTaGAAATCTTCAAAACAAGTT +
Preference number: 4 (lower is better)
Translates to: TKCYELSDVHILILAQNVPLLQN*KSSKQV
Trigger: AACTTGTTTTGAAGATTTTCAGTTCTGCAGAAGAGG...GACGTTTTGGGCAAGAATAAGGATGTGAACATCAGAAAGCTCATAACATTTTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
CDS-3UTR GCA 90 bp AAACATTACACTGCAAAAGTTACATTACCATTAACATGCAGCCTACATTTCCAGACATTACCATTAACATaGAGCCTACATTTCCAGGCT +
Preference number: 4 (lower is better)
Translates to: KHYTAKVTLPLTCSLHFQTLPLT*SLHFQA
Trigger: AGCCTGGAAATGTAGGCTGCATGTTAATGGTAATGT...CTGGAAATGTAGGCTGCATGTTAATGGTAATGTAACTTTTGCAGTGTAATGTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000530245.5
ENST00000616577.4
CDS-3UTR GCA 90 bp ACAAAATGTTATGAGCTTTCTGATGTTCACATCCTTATTCTTGCCCAAAACGTCGGGAAATACCTCTTCTaGAGAACTGAAAATCTTCAA +
Preference number: 4 (lower is better)
Translates to: TKCYELSDVHILILAQNVGKYLF*RTENLQ
Trigger: TTGAAGATTTTCAGTTCTGCAGAAGAGGTATTTCCC...GACGTTTTGGGCAAGAATAAGGATGTGAACATCAGAAAGCTCATAACATTTTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
CDS-3UTR GCA 90 bp AAACATTACACTGCAAAAGTTACATTACCATTAACATGCAGCCTACATTTCCAGCTGTATTGTATTTCATaGCTGCGACTGTTAGTCTCT +
Preference number: 4 (lower is better)
Translates to: KHYTAKVTLPLTCSLHFQLYCIS*LRLLVS
Trigger: AGAGACTAACAGTCGCAGGCATGAAATACAATACAG...CTGGAAATGTAGGCTGCATGTTAATGGTAATGTAACTTTTGCAGTGTAATGTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616577.4
CDS-3UTR GCA 90 bp AACGGTAGTCAAGTTTACCACTATCAGGCCTCATATTACTTAAGTACTTTGCAAATAGACATGATAAAATaGTATGTCCCAGCCTTGATT +
Preference number: 4 (lower is better)
Translates to: NGSQVYHYQASYYLSTLQIDMIK*YVPALI
Trigger: AATCAAGGCTGGGACATAGCATTTTATCATGTCTAT...TTGCAAAGTACTTAAGTAATATGAGGCCTGATAGTGGTAAACTTGACTACCGTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
CDS GCA 90 bp CCGCCATTTCCCGCATTTCCCGCGCCGGCGGCCGCACGCGGGATCTaGCCCTCCGTAGCACACCAGAGCTGGGCGCGAGCCCCGGGCACC +
Preference number: 5 (lower is better)
Translates to: PPFPAFPAPAAARGI*PSVAHQSWARAPGT
Trigger: GGTGCCCGGGGCTCGCGCCCAGCTCTGGTGTGCTACGGAGGGGCAGATCCCGCGTGCGGCCGCCGGCGCGGGAAATGCGGGAAATGGCGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379055.5
CDS-3UTR CAA 90 bp TCACAGCTCACTGCACCCTCAATCTCTCGGACTCAAGCCATCCTCTCAGCTCAGCTGGGAGGCCCTCCCTaGGTTCTTACCTCAGGGGCA +
Preference number: 5 (lower is better)
Translates to: SQLTAPSISRTQAILSAQLGGPP*VLTSGA
Trigger: TGCCCCTGAGGTAAGAACCAAGGGAGGGCCTCCCAG...CTGAGCTGAGAGGATGGCTTGAGTCCGAGAGATTGAGGGTGCAGTGAGCTGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
CDS-3UTR CAA 90 bp TCACAGCTCACTGCACCCTCAATCTCTCGGACTCAAGCCATCCTCTCAGCTCAGGCGCCTGTGGTTTCCTaGAGGTCTGGTCTTCCTTCC +
Preference number: 5 (lower is better)
Translates to: SQLTAPSISRTQAILSAQAPVVS*RSGLPS
Trigger: GGAAGGAAGACCAGACCTCAAGGAAACCACAGGCGC...CTGAGCTGAGAGGATGGCTTGAGTCCGAGAGATTGAGGGTGCAGTGAGCTGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
CDS-3UTR CAA 90 bp TCACAGCTCACTGCACCCTCAATCTCTCGGACTCAAGCCATCCTCTCAGCTCAGAATGCAGTGAGTTGCTaGTGCCACTGCACTACAAGC +
Preference number: 5 (lower is better)
Translates to: SQLTAPSISRTQAILSAQNAVSC*CHCTTS
Trigger: GCTTGTAGTGCAGTGGCACAAGCAACTCACTGCATT...CTGAGCTGAGAGGATGGCTTGAGTCCGAGAGATTGAGGGTGCAGTGAGCTGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
CDS-3UTR CAA 90 bp GGGCAAACTCCAGATTGCTCAAACCACTACATTCACATGTTCAAGCAGACCAGAGGTGGGCAGATCTCCTaGAGCCCAGGAGTTGAGACC +
Preference number: 5 (lower is better)
Translates to: GQTPDCSNHYIHMFKQTRGGQIS*SPGVET
Trigger: GGTCTCAACTCCTGGGCTCAAGGAGATCTGCCCACC...TCTGGTCTGCTTGAACATGTGAATGTAGTGGTTTGAGCAATCTGGAGTTTGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
CDS-3UTR CAA 90 bp CCATCCTCTCAGCTCAGCCGCCTGAGTAGCTGGGACTACAGATGCCCAATTAATTGGACAGTCTGGAATTaGACACTAGGGCAAACTCCA +
Preference number: 5 (lower is better)
Translates to: PSSQLSRLSSWDYRCPINWTVWN*TLGQTP
Trigger: TGGAGTTTGCCCTAGTGTCAAATTCCAGACTGTCCA...ATTAATTGGGCATCTGTAGTCCCAGCTACTCAGGCGGCTGAGCTGAGAGGATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
CDS-3UTR CAA 90 bp CAGGTTTTGGACACTATGGACAGTCTGGAATTTGACACTAGGGCAAACTCCAGAGCGCCTGTGGTTTCCTaGAGGTCTGGTCTTCCTTCC +
Preference number: 5 (lower is better)
Translates to: QVLDTMDSLEFDTRANSRAPVVS*RSGLPS
Trigger: GGAAGGAAGACCAGACCTCAAGGAAACCACAGGCGC...TCTGGAGTTTGCCCTAGTGTCAAATTCCAGACTGTCCATAGTGTCCAAAACCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
CDS-3UTR CAA 90 bp TTTTTCCACCTGACCTCTGGGAGGCCCTCCCTTGGTTCTTACCTCAGGGGCAGTTCAACCAATCTCATGTaGGAATGCAGTCTATCCTCT +
Preference number: 5 (lower is better)
Translates to: FFHLTSGRPSLGSYLRGSSTNLM*ECSLSS
Trigger: AGAGGATAGACTGCATTCCAACATGAGATTGGTTGA...ACTGCCCCTGAGGTAAGAACCAAGGGAGGGCCTCCCAGAGGTCAGGTGGAAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
CDS-3UTR CAA 90 bp ATTATACACAATTATTCTATGCTTTTACCCTGCCACCTGGCAGCCAAAGTGATCCTGGGAGGCCCTCCCTaGGTTCTTACCTCAGGGGCA +
Preference number: 5 (lower is better)
Translates to: IIHNYSMLLPCHLAAKVILGGPP*VLTSGA
Trigger: TGCCCCTGAGGTAAGAACCAAGGGAGGGCCTCCCAG...GATCACTTTGGCTGCCAGGTGGCAGGGTAAAAGCATAGAATAATTGTGTATAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
CDS-3UTR CAA 90 bp ATTGCTCAAACCACTACATTCACATGTTCAAGCAGACCAGAGTCACTGGCCTGCAATGCAGTGAGTTGCTaGTGCCACTGCACTACAAGC +
Preference number: 5 (lower is better)
Translates to: IAQTTTFTCSSRPESLACNAVSC*CHCTTS
Trigger: GCTTGTAGTGCAGTGGCACAAGCAACTCACTGCATT...GCAGGCCAGTGACTCTGGTCTGCTTGAACATGTGAATGTAGTGGTTTGAGCAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
CDS-3UTR CAA 90 bp ATTATACACAATTATTCTATGCTTTTACCCTGCCACCTGGCAGCCAAAGTGATCGGTGGGCAGATCTCCTaGAGCCCAGGAGTTGAGACC +
Preference number: 5 (lower is better)
Translates to: IIHNYSMLLPCHLAAKVIGGQIS*SPGVET
Trigger: GGTCTCAACTCCTGGGCTCAAGGAGATCTGCCCACC...GATCACTTTGGCTGCCAGGTGGCAGGGTAAAAGCATAGAATAATTGTGTATAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
CDS-3UTR CAA 90 bp GCCCAGGAGTTGAGACCACCCTGGGCAACTAAGCGATACTCGGTCTCTACAAAAAATACGTATTTAGGTTaGTTTCCAATCACGGGGTGC +
Preference number: 5 (lower is better)
Translates to: AQELRPPWATKRYSVSTKNTYLG*FPITGC
Trigger: GCACCCCGTGATTGGAAACAAACCTAAATACGTATT...TTTTGTAGAGACCGAGTATCGCTTAGTTGCCCAGGGTGGTCTCAACTCCTGGGC
49% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
CDS-3UTR CAA 90 bp CCATCCTCTCAGCTCAGCCGCCTGAGTAGCTGGGACTACAGATGCCCAATTAATCACAAAGTCTCTGAATaGCTACTTGTCTGTTTCAGG +
Preference number: 5 (lower is better)
Translates to: PSSQLSRLSSWDYRCPINHKVSE*LLVCFR
Trigger: CCTGAAACAGACAAGTAGCAATTCAGAGACTTTGTG...ATTAATTGGGCATCTGTAGTCCCAGCTACTCAGGCGGCTGAGCTGAGAGGATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
CDS-3UTR CAA 90 bp AACTGCTGTTGTCTTGGCCTGGAATGGTTTGTCCTGATATCCACATGGCCTACTTGCTATGTCCCAGCCTaGATTGGATCTGGATGTTGG +
Preference number: 5 (lower is better)
Translates to: NCCCLGLEWFVLISTWPTCYVPA*IGSGCW
Trigger: CCAACATCCAGATCCAATCAAGGCTGGGACATAGCA...AGTAGGCCATGTGGATATCAGGACAAACCATTCCAGGCCAAGACAACAGCAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
CDS-3UTR CAA 90 bp CTGTTGACTACTTCCTCCTTCCTAAAACTTTTTCCACCTGACCTCTGGGAGGCCCCTAGAAAAGTCCTCTaGCTCCACTCAGTTGTTCTC +
Preference number: 5 (lower is better)
Translates to: LLTTSSFLKLFPPDLWEAPRKVL*LHSVVL
Trigger: GAGAACAACTGAGTGGAGCAAGAGGACTTTTCTAGG...GGCCTCCCAGAGGTCAGGTGGAAAAAGTTTTAGGAAGGAGGAAGTAGTCAACAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
CDS-3UTR CAA 90 bp TCACAGCTCACTGCACCCTCAATCTCTCGGACTCAAGCCATCCTCTCAGCTCAGGTTCTCTCAAGTTGGTaGAGATTTATTGCTCGTCTT +
Preference number: 5 (lower is better)
Translates to: SQLTAPSISRTQAILSAQVLSSW*RFIARL
Trigger: AAGACGAGCAATAAATCTCAACCAACTTGAGAGAAC...CTGAGCTGAGAGGATGGCTTGAGTCCGAGAGATTGAGGGTGCAGTGAGCTGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
CDS-3UTR CAA 90 bp TCTGCAGAACTGAAAATCTTCAAAACAAGTTGGAGCAGTGGAGCCCACAAAGTCAACATTTTTACCCCTTaGCCCACCAGCCAGCCCACA +
Preference number: 5 (lower is better)
Translates to: SAELKIFKTSWSSGAHKVNIFTP*PTSQPT
Trigger: TGTGGGCTGGCTGGTGGGCAAAGGGGTAAAAATGTT...GACTTTGTGGGCTCCACTGCTCCAACTTGTTTTGAAGATTTTCAGTTCTGCAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
CDS-3UTR CAA 90 bp TCACAGCTCACTGCACCCTCAATCTCTCGGACTCAAGCCATCCTCTCAGCTCAGTTTGTTGGTTTCTCTTaGTCAACCAATCTCATGTTG +
Preference number: 5 (lower is better)
Translates to: SQLTAPSISRTQAILSAQFVGFS*STNLML
Trigger: CAACATGAGATTGGTTGACAAAGAGAAACCAACAAA...CTGAGCTGAGAGGATGGCTTGAGTCCGAGAGATTGAGGGTGCAGTGAGCTGTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
CDS-3UTR CAA 90 bp TGCAGAACTGAAAATCTTCAAAACAAGTTGGAGCAGTGGAGCCCACAAAGTCTCAGGTGGGAAAATGGCTaGAGCACAGGATGCAGAGAA +
Preference number: 5 (lower is better)
Translates to: CRTENLQNKLEQWSPQSLRWENG*STGCRE
Trigger: TTCTCTGCATCCTGTGCTCAAGCCATTTTCCCACCT...GAGACTTTGTGGGCTCCACTGCTCCAACTTGTTTTGAAGATTTTCAGTTCTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
CDS-3UTR CAA 90 bp TCTGCAGAACTGAAAATCTTCAAAACAAGTTGGAGCAGTGGAGCCCACAAAGTCAGGTGGGAAAATGGCTaGAGCACAGGATGCAGAGAA +
Preference number: 5 (lower is better)
Translates to: SAELKIFKTSWSSGAHKVRWENG*STGCRE
Trigger: TTCTCTGCATCCTGTGCTCAAGCCATTTTCCCACCT...GACTTTGTGGGCTCCACTGCTCCAACTTGTTTTGAAGATTTTCAGTTCTGCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
CDS-3UTR CAA 90 bp GACCTTCCTAGAAAAGTCCTCTTGCTCCACTCAGTTGTTCTCCACACTTTAACACTAACTGCTGTTGTCTaGGCCTGGAATGGTTTGTCC +
Preference number: 5 (lower is better)
Translates to: DLPRKVLLLHSVVLHTLTLTAVV*AWNGLS
Trigger: GGACAAACCATTCCAGGCCAAGACAACAGCAGTTAG...TGTTAAAGTGTGGAGAACAACTGAGTGGAGCAAGAGGACTTTTCTAGGAAGGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
CDS-3UTR CAA 90 bp CAGGTTTTGGACACTATGGACAGTCTGGAATTTGACACTAGGGCAAACTCCAGACAACAGGTAACCCTGTaGACTACTTCCTCCTTCCTA +
Preference number: 5 (lower is better)
Translates to: QVLDTMDSLEFDTRANSRQQVTL*TTSSFL
Trigger: TAGGAAGGAGGAAGTAGTCAACAGGGTTACCTGTTG...TCTGGAGTTTGCCCTAGTGTCAAATTCCAGACTGTCCATAGTGTCCAAAACCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
CDS-3UTR CAA 90 bp GGGCAAACTCCAGATTGCTCAAACCACTACATTCACATGTTCAAGCAGACCAGAAGGGCAAACTCCAGATaGCTCAAACCACTACATTCA +
Preference number: 5 (lower is better)
Translates to: GQTPDCSNHYIHMFKQTRRANSR*LKPLHS
Trigger: TGAATGTAGTGGTTTGAGCAATCTGGAGTTTGCCCT...TCTGGTCTGCTTGAACATGTGAATGTAGTGGTTTGAGCAATCTGGAGTTTGCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
CDS-3UTR CAA 90 bp TGCAGAACTGAAAATCTTCAAAACAAGTTGGAGCAGTGGAGCCCACAAAGTCTCCTTGCCCAAAACGTCTaGACCCTAGGAATAACGAGA +
Preference number: 5 (lower is better)
Translates to: CRTENLQNKLEQWSPQSLLAQNV*TLGITR
Trigger: TCTCGTTATTCCTAGGGTCAAGACGTTTTGGGCAAG...GAGACTTTGTGGGCTCCACTGCTCCAACTTGTTTTGAAGATTTTCAGTTCTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
CDS-3UTR CAA 90 bp TCTGCAGAACTGAAAATCTTCAAAACAAGTTGGAGCAGTGGAGCCCACAAAGTCCAACAGGTAACCCTGTaGACTACTTCCTCCTTCCTA +
Preference number: 5 (lower is better)
Translates to: SAELKIFKTSWSSGAHKVQQVTL*TTSSFL
Trigger: TAGGAAGGAGGAAGTAGTCAACAGGGTTACCTGTTG...GACTTTGTGGGCTCCACTGCTCCAACTTGTTTTGAAGATTTTCAGTTCTGCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
CDS-3UTR CAA 90 bp AAGTACTTTGCAACAGGTAACCCTGTTGACTACTTCCTCCTTCCTAAAACTTTTAACATTTTTACCCCTTaGCCCACCAGCCAGCCCACA +
Preference number: 5 (lower is better)
Translates to: KYFATGNPVDYFLLPKTFNIFTP*PTSQPT
Trigger: TGTGGGCTGGCTGGTGGGCAAAGGGGTAAAAATGTT...AAAAGTTTTAGGAAGGAGGAAGTAGTCAACAGGGTTACCTGTTGCAAAGTACTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
CDS-3UTR CAA 90 bp GTTCACATCCTTATTCTTGCCCAAAACGTCTTGACCCTAGGAATAACGAGAAAAAGAGAATGCAGTGAGTaGCTTGTGCCACTGCACTAC +
Preference number: 5 (lower is better)
Translates to: VHILILAQNVLTLGITRKRECSE*LVPLHY
Trigger: GTAGTGCAGTGGCACAAGCAACTCACTGCATTCTCT...TTTTCTCGTTATTCCTAGGGTCAAGACGTTTTGGGCAAGAATAAGGATGTGAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
CDS-3UTR CAA 90 bp GGAATGCAGTCTATCCTCTCTCCAAATGACCTTATCCTGTATCATGGCTTTCAATGGACAGTCTGGAATTaGACACTAGGGCAAACTCCA +
Preference number: 5 (lower is better)
Translates to: GMQSILSPNDLILYHGFQWTVWN*TLGQTP
Trigger: TGGAGTTTGCCCTAGTGTCAAATTCCAGACTGTCCA...TTGAAAGCCATGATACAGGATAAGGTCATTTGGAGAGAGGATAGACTGCATTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
CDS-3UTR CAA 90 bp GGGTTAACATTAGTATCTGCCTCAGGTTTTGGACACTATGGACAGTCTGGAATTCCTAGAAAAGTCCTCTaGCTCCACTCAGTTGTTCTC +
Preference number: 5 (lower is better)
Translates to: GLTLVSASGFGHYGQSGIPRKVL*LHSVVL
Trigger: GAGAACAACTGAGTGGAGCAAGAGGACTTTTCTAGG...AATTCCAGACTGTCCATAGTGTCCAAAACCTGAGGCAGATACTAATGTTAACCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
CDS-3UTR CAA 90 bp ATTATACACAATTATTCTATGCTTTTACCCTGCCACCTGGCAGCCAAAGTGATCCTAACTGCTGTTGTCTaGGCCTGGAATGGTTTGTCC +
Preference number: 5 (lower is better)
Translates to: IIHNYSMLLPCHLAAKVILTAVV*AWNGLS
Trigger: GGACAAACCATTCCAGGCCAAGACAACAGCAGTTAG...GATCACTTTGGCTGCCAGGTGGCAGGGTAAAAGCATAGAATAATTGTGTATAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
CDS-3UTR CAA 90 bp ATTATACACAATTATTCTATGCTTTTACCCTGCCACCTGGCAGCCAAAGTGATCTATCTGCCTCAGGTTTaGGACACTATGGACAGTCTG +
Preference number: 5 (lower is better)
Translates to: IIHNYSMLLPCHLAAKVIYLPQV*DTMDSL
Trigger: CAGACTGTCCATAGTGTCCAAAACCTGAGGCAGATA...GATCACTTTGGCTGCCAGGTGGCAGGGTAAAAGCATAGAATAATTGTGTATAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
CDS-3UTR CAA 90 bp TTCAAATGTCACATTACAAGGACCTTCCTAGAAAAGTCCTCTTGCTCCACTCAGAATCTTCAAAACAAGTaGGAGCAGTGGAGCCCACAA +
Preference number: 5 (lower is better)
Translates to: FKCHITRTFLEKSSCSTQNLQNK*EQWSPQ
Trigger: TTGTGGGCTCCACTGCTCCAACTTGTTTTGAAGATT...CTGAGTGGAGCAAGAGGACTTTTCTAGGAAGGTCCTTGTAATGTGACATTTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
CDS-3UTR CAA 90 bp GGAATGCAGTCTATCCTCTCTCCAAATGACCTTATCCTGTATCATGGCTTTCAAGATTGGATCTGGATGTaGGGAAAACAGCTAAGAGCA +
Preference number: 5 (lower is better)
Translates to: GMQSILSPNDLILYHGFQDWIWM*GKQLRA
Trigger: TGCTCTTAGCTGTTTTCCCAACATCCAGATCCAATC...TTGAAAGCCATGATACAGGATAAGGTCATTTGGAGAGAGGATAGACTGCATTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
CDS-3UTR CAA 90 bp ATTGCTCAAACCACTACATTCACATGTTCAAGCAGACCAGAGTCACTGGCCTGCTTTGTTGGTTTCTCTTaGTCAACCAATCTCATGTTG +
Preference number: 5 (lower is better)
Translates to: IAQTTTFTCSSRPESLACFVGFS*STNLML
Trigger: CAACATGAGATTGGTTGACAAAGAGAAACCAACAAA...GCAGGCCAGTGACTCTGGTCTGCTTGAACATGTGAATGTAGTGGTTTGAGCAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
CDS-3UTR CAA 90 bp TCTGCAGAACTGAAAATCTTCAAAACAAGTTGGAGCAGTGGAGCCCACAAAGTCCAGTGTTCTCTCAAGTaGGTTGAGATTTATTGCTCG +
Preference number: 5 (lower is better)
Translates to: SAELKIFKTSWSSGAHKVQCSLK*VEIYCS
Trigger: CGAGCAATAAATCTCAACCAACTTGAGAGAACACTG...GACTTTGTGGGCTCCACTGCTCCAACTTGTTTTGAAGATTTTCAGTTCTGCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
CDS GCA 90 bp CCTTCTGTCCTACTGACCATCTGCATTAAGAAAAAGCAGTATAATTaGAAAAGACACAAACGCATCCAAAGCACCTTCCACGCCAATAGT +
Preference number: 5 (lower is better)
Translates to: PSVLLTICIKKKQYN*KRHKRIQSTFHANS
Trigger: ACTATTGGCGTGGAAGGTGCTTTGGATGCGTTTGTGTCTTTTGCAATTATACTGCTTTTTCTTAATGCAGATGGTCAGTAGGACAGAAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000442760.2
ENST00000533567.5
CDS-3UTR CAA 90 bp AAGTACTTTGCAACAGGTAACCCTGTTGACTACTTCCTCCTTCCTAAAACTTTTTTAGAAGGCCAAAGCTaGAGATCACTTGAGGCCAGA +
Preference number: 5 (lower is better)
Translates to: KYFATGNPVDYFLLPKTFLEGQS*RSLEAR
Trigger: TCTGGCCTCAAGTGATCTCAAGCTTTGGCCTTCTAA...AAAAGTTTTAGGAAGGAGGAAGTAGTCAACAGGGTTACCTGTTGCAAAGTACTT
42% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
CDS-3UTR CAA 90 bp AACGGTAGTCAAGTTTACCACTATCAGGCCTCATATTACTTAAGTACTTTGCAATGCTATGTCCCAGCCTaGATTGGATCTGGATGTTGG +
Preference number: 5 (lower is better)
Translates to: NGSQVYHYQASYYLSTLQCYVPA*IGSGCW
Trigger: CCAACATCCAGATCCAATCAAGGCTGGGACATAGCA...TTGCAAAGTACTTAAGTAATATGAGGCCTGATAGTGGTAAACTTGACTACCGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
CDS-3UTR CAA 90 bp GAACTGAAAATCTTCAAAACAAGTTGGAGCAGTGGAGCCCACAAAGTCTCTGAAAACCATGTACCTGTATaGTATTTCATGCCTGCGACT +
Preference number: 5 (lower is better)
Translates to: ELKIFKTSWSSGAHKVSENHVPV*YFMPAT
Trigger: AGTCGCAGGCATGAAATACAATACAGGTACATGGTT...TTCAGAGACTTTGTGGGCTCCACTGCTCCAACTTGTTTTGAAGATTTTCAGTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
CDS-3UTR CAA 90 bp AACGGTAGTCAAGTTTACCACTATCAGGCCTCATATTACTTAAGTACTTTGCAATATCTGCCTCAGGTTTaGGACACTATGGACAGTCTG +
Preference number: 5 (lower is better)
Translates to: NGSQVYHYQASYYLSTLQYLPQV*DTMDSL
Trigger: CAGACTGTCCATAGTGTCCAAAACCTGAGGCAGATA...TTGCAAAGTACTTAAGTAATATGAGGCCTGATAGTGGTAAACTTGACTACCGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
CDS-3UTR CAA 90 bp TTAAATCCATCCTCACCCACCAGCATATCCTGTTGTCTCTATCTTCATTTCCTAAATACGTATTTAGGTTaGTTTCCAATCACGGGGTGC +
Preference number: 5 (lower is better)
Translates to: LNPSSPTSISCCLYLHFLNTYLG*FPITGC
Trigger: GCACCCCGTGATTGGAAACAAACCTAAATACGTATT...TAGGAAATGAAGATAGAGACAACAGGATATGCTGGTGGGTGAGGATGGATTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
CDS-3UTR CAA 90 bp ACAAAATGTTATGAGCTTTCTGATGTTCACATCCTTATTCTTGCCCAAAACGTCTTAGAAGGCCAAAGCTaGAGATCACTTGAGGCCAGA +
Preference number: 5 (lower is better)
Translates to: TKCYELSDVHILILAQNVLEGQS*RSLEAR
Trigger: TCTGGCCTCAAGTGATCTCAAGCTTTGGCCTTCTAA...GACGTTTTGGGCAAGAATAAGGATGTGAACATCAGAAAGCTCATAACATTTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
CDS-3UTR CAA 90 bp TTGTCAACCAATCTCATGTTGGAATGCAGTCTATCCTCTCTCCAAATGACCTTATCAACCAATCTCATGTaGGAATGCAGTCTATCCTCT +
Preference number: 5 (lower is better)
Translates to: LSTNLMLECSLSSLQMTLSTNLM*ECSLSS
Trigger: AGAGGATAGACTGCATTCCAACATGAGATTGGTTGA...TAAGGTCATTTGGAGAGAGGATAGACTGCATTCCAACATGAGATTGGTTGACAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
CDS-3UTR CAA 90 bp CACACTTTAACAAACCCTAGGGCCCACAGGCTACTAAAGCATGCCTTTGTTAAATATTACTTAAGTACTTaGCAACAGGTAACCCTGTTG +
Preference number: 5 (lower is better)
Translates to: HTLTNPRAHRLLKHAFVKYYLST*QQVTLL
Trigger: CAACAGGGTTACCTGTTGCAAAGTACTTAAGTAATA...TTTAACAAAGGCATGCTTTAGTAGCCTGTGGGCCCTAGGGTTTGTTAAAGTGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
CDS-3UTR CAA 90 bp AACATTAGTATCTGCCTCAGGTTTTGGACACTATGGACAGTCTGGAATTTGACAAACCATGTACCTGTATaGTATTTCATGCCTGCGACT +
Preference number: 5 (lower is better)
Translates to: NISICLRFWTLWTVWNLTNHVPV*YFMPAT
Trigger: AGTCGCAGGCATGAAATACAATACAGGTACATGGTT...TGTCAAATTCCAGACTGTCCATAGTGTCCAAAACCTGAGGCAGATACTAATGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
CDS-3UTR CAA 90 bp GGGTTAACATTAGTATCTGCCTCAGGTTTTGGACACTATGGACAGTCTGGAATTGTTCTCTCAAGTTGGTaGAGATTTATTGCTCGTCTT +
Preference number: 5 (lower is better)
Translates to: GLTLVSASGFGHYGQSGIVLSSW*RFIARL
Trigger: AAGACGAGCAATAAATCTCAACCAACTTGAGAGAAC...AATTCCAGACTGTCCATAGTGTCCAAAACCTGAGGCAGATACTAATGTTAACCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
CDS-3UTR CAA 90 bp AACGGTAGTCAAGTTTACCACTATCAGGCCTCATATTACTTAAGTACTTTGCAAAATCTTCAAAACAAGTaGGAGCAGTGGAGCCCACAA +
Preference number: 5 (lower is better)
Translates to: NGSQVYHYQASYYLSTLQNLQNK*EQWSPQ
Trigger: TTGTGGGCTCCACTGCTCCAACTTGTTTTGAAGATT...TTGCAAAGTACTTAAGTAATATGAGGCCTGATAGTGGTAAACTTGACTACCGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
CDS-3UTR CAA 90 bp AGTCAAGTTTACCACTATCAGGCCTCATATTACTTAAGTACTTTGCAACAGGTAGATTGGATCTGGATGTaGGGAAAACAGCTAAGAGCA +
Preference number: 5 (lower is better)
Translates to: SQVYHYQASYYLSTLQQVDWIWM*GKQLRA
Trigger: TGCTCTTAGCTGTTTTCCCAACATCCAGATCCAATC...TACCTGTTGCAAAGTACTTAAGTAATATGAGGCCTGATAGTGGTAAACTTGACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
CDS-3UTR CAA 90 bp GGGTTAACATTAGTATCTGCCTCAGGTTTTGGACACTATGGACAGTCTGGAATTTATTACTTAAGTACTTaGCAACAGGTAACCCTGTTG +
Preference number: 5 (lower is better)
Translates to: GLTLVSASGFGHYGQSGIYYLST*QQVTLL
Trigger: CAACAGGGTTACCTGTTGCAAAGTACTTAAGTAATA...AATTCCAGACTGTCCATAGTGTCCAAAACCTGAGGCAGATACTAATGTTAACCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
CDS-3UTR CAA 90 bp AGTCAAGTTTACCACTATCAGGCCTCATATTACTTAAGTACTTTGCAACAGGTACACAAAGTCTCTGAATaGCTACTTGTCTGTTTCAGG +
Preference number: 5 (lower is better)
Translates to: SQVYHYQASYYLSTLQQVHKVSE*LLVCFR
Trigger: CCTGAAACAGACAAGTAGCAATTCAGAGACTTTGTG...TACCTGTTGCAAAGTACTTAAGTAATATGAGGCCTGATAGTGGTAAACTTGACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
CDS-3UTR CAA 90 bp AACGGTAGTCAAGTTTACCACTATCAGGCCTCATATTACTTAAGTACTTTGCAACAGTGTTCTCTCAAGTaGGTTGAGATTTATTGCTCG +
Preference number: 5 (lower is better)
Translates to: NGSQVYHYQASYYLSTLQQCSLK*VEIYCS
Trigger: CGAGCAATAAATCTCAACCAACTTGAGAGAACACTG...TTGCAAAGTACTTAAGTAATATGAGGCCTGATAGTGGTAAACTTGACTACCGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000530705.6
ENST00000616577.4
CDS CCA 90 bp AAGATTTGGAAACACCTGCGAGCTGGGAAAGCCACTTTCTACACCTaGAATACTAGTATAGAATTGAAGATTAATCAACTTAATTTTTGC +
Preference number: 5 (lower is better)
Translates to: KIWKHLRAGKATFYT*NTSIELKINQLNFC
Trigger: GCAAAAATTAAGTTGATTAATCTTCAATTCTATACTAGTATTCCAGGTGTAGAAAGTGGCTTTCCCAGCTCGCAGGTGTTTCCAAATCTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000490277.1
CDS GCA 72 bp CCCGCATTTCCCGCGCCGGCGGCCGCACGCGGGATCTaGCCCTCCGTAGCACACCAGAGCTGGGCGCGAGCC +
Preference number: 6 (lower is better)
Translates to: PAFPAPAAARGI*PSVAHQSWARA
Trigger: GGCTCGCGCCCAGCTCTGGTGTGCTACGGAGGGGCAGATCCCGCGTGCGGCCGCCGGCGCGGGAAATGCGGG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379055.5
CDS CAA 72 bp AAGAGCGTCTCCTCCGCCAGGAGGCGGCGGGGAGGATaGCACAACCTCAGGCGGGGGAGCGGAGGAAACCCG +
Preference number: 6 (lower is better)
Translates to: KSVSSARRRRGG*HNLRRGSGGNP
Trigger: CGGGTTTCCTCCGCTCCCCCGCCTGAGGTTGTGCAATCCTCCCCGCCGCCTCCTGGCGGAGGAGACGCTCTT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000442760.2
CDS GCA 72 bp CATATAGAGGGCACGTCCCTCTACGTCATCGCCCGCTaGGCCTCCGGAAGCGACGCAGGCGGTGACGTGGCA +
Preference number: 6 (lower is better)
Translates to: HIEGTSLYVIAR*ASGSDAGGDVA
Trigger: TGCCACGTCACCGCCTGCGTCGCTTCCGGAGGCGCAGCGGGCGATGACGTAGAGGGACGTGCCCTCTATATG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616577.4
CDS CCA 72 bp GGAAGCATCATGTCCCGGACAACCCCGGGAGGAGGATaGGCGCCGAGGCGGCGGGCCTATTTCCAGGATCAG +
Preference number: 6 (lower is better)
Translates to: GSIMSRTTPGGG*APRRRAYFQDQ
Trigger: CTGATCCTGGAAATAGGCCCGCCGCCTCGGCGCCCATCCTCCTCCCGGGGTTGTCCGGGACATGATGCTTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442760.2
CDS CCA 72 bp TCCAGTTGCGGGCATGTGATGCCTCCGGTTGGTAAGTaGGGACAGGACAAACACGAAAGGACTCCAGGCTCC +
Preference number: 6 (lower is better)
Translates to: SSCGHVMPPVGK*GQDKHERTPGS
Trigger: GGAGCCTGGAGTCCTTTCGTGTTTGTCCTGTCCCCACTTACCAACCGGAGGCATCACATGCCCGCAACTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442760.2
CDS TCA 72 bp ATACAGTCTGGAAGTATCTTATGGCCAGGGGATGCATaGAGCTGGAAAATTAGAGGAAAGGGAAAGCCACTG +
Preference number: 6 (lower is better)
Translates to: IQSGSILWPGDA*SWKIRGKGKPL
Trigger: CAGTGGCTTTCCCTTTCCTCTAATTTTCCAGCTTCATGCATCCCCTGGCCATAAGATACTTCCAGACTGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490277.1
CDS CCA 72 bp CATAAGGCTGACAGTGATAGAATATATCATACAGTCTaGAAGTATCTTATGGCCAGGGGATGCATGAAGCTG +
Preference number: 6 (lower is better)
Translates to: HKADSDRIYHTV*KYLMARGCMKL
Trigger: CAGCTTCATGCATCCCCTGGCCATAAGATACTTCCAGACTGTATGATATATTCTATCACTGTCAGCCTTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490277.1
CDS GCA 72 bp AAACATTACACTGCAAAAGTTACATTACCATTAACATaGAGCCTACATTTCCAGGCTAAAGATGTATTCCCC +
Preference number: 6 (lower is better)
Translates to: KHYTAKVTLPLT*SLHFQAKDVFP
Trigger: GGGGAATACATCTTTAGCCTGGAAATGTAGGCTGCATGTTAATGGTAATGTAACTTTTGCAGTGTAATGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000530245.5
ENST00000616577.4