Pregenerated sensors for TPRKB (Homo sapiens)
Ensembl gene IDs: ENSG00000144034Ensembl transcript IDs: ENST00000318190.7, ENST00000409716.6, ENST00000462166.1, ENST00000463231.5, ENST00000470012.1, ENST00000484969.5, ENST00000485758.1, ENST00000489476.5
Found 22 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | CACCTCCTCCCTCTGGTGCCAAGTGGCCCTCCAGCCAGGCGCTTCTaGCTTCTGGCCAGTCCAGCCTGCCTGGGGATCCAGTCACATTTC | + |
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Preference number: 5 (lower is better) Translates to: HLLPLVPSGPPARRF*LLASPACLGIQSHF Trigger: GAAATGTGACTGGATCCCCAGGCAGGCTGGACTGGCCAGAAGGCAGAAGCGCCTGGCTGGAGGGCCACTTGGCACCAGAGGGAGGAGGTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000485758.1 |
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| CDS GCA 90 bp | AAGCCCAGCCTCTTGGCGCTGCACAAAAACACCTCCTCCCTCTGGTaGCAAGTGGCCCTCCAGCCAGGCGCTTCTGCCTTCTGGCCAGTC | + |
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Preference number: 5 (lower is better) Translates to: KPSLLALHKNTSSLW*QVALQPGASAFWPV Trigger: GACTGGCCAGAAGGCAGAAGCGCCTGGCTGGAGGGCCACTTGGCACCAGAGGGAGGAGGTGTTTTTGTGCAGCGCCAAGAGGCTGGGCTT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000485758.1 |
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| CDS CCA 90 bp | TCCCTCTGGTGCCAAGTGGCCCTCCAGCCAGGCGCTTCTGCCTTCTaGCCAGTCCAGCCTGCCTGGGGATCCAGTCACATTTCATGCCCT | + |
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Preference number: 5 (lower is better) Translates to: SLWCQVALQPGASAF*PVQPAWGSSHISCP Trigger: AGGGCATGAAATGTGACTGGATCCCCAGGCAGGCTGGACTGGCCAGAAGGCAGAAGCGCCTGGCTGGAGGGCCACTTGGCACCAGAGGGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000485758.1 |
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| CDS CCA 90 bp | GCCCTCCAGCCAGGCGCTTCTGCCTTCTGGCCAGTCCAGCCTGCCTaGGGATCCAGTCACATTTCATGCCCTTCTGCCTGTGCTCAAGCT | + |
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Preference number: 5 (lower is better) Translates to: ALQPGASAFWPVQPA*GSSHISCPSACAQA Trigger: AGCTTGAGCACAGGCAGAAGGGCATGAAATGTGACTGGATCCCCAGGCAGGCTGGACTGGCCAGAAGGCAGAAGCGCCTGGCTGGAGGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000485758.1 |
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| CDS GCA 90 bp | CCAGCCTGCCTGGGGATCCAGTCACATTTCATGCCCTTCTGCCTGTaGTCAAGCTTTGTCCTCTGCTCGCATGTCCCTTCTCCTCATGGC | + |
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Preference number: 5 (lower is better) Translates to: PACLGIQSHFMPFCL*SSFVLCSHVPSPHG Trigger: GCCATGAGGAGAAGGGACATGCGAGCAGAGGACAAAGCTTGAGCACAGGCAGAAGGGCATGAAATGTGACTGGATCCCCAGGCAGGCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000485758.1 |
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| CDS GCA 90 bp | GCCAGTCCAGCCTGCCTGGGGATCCAGTCACATTTCATGCCCTTCTaGCTGTGCTCAAGCTTTGTCCTCTGCTCGCATGTCCCTTCTCCT | + |
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Preference number: 5 (lower is better) Translates to: ASPACLGIQSHFMPF*LCSSFVLCSHVPSP Trigger: AGGAGAAGGGACATGCGAGCAGAGGACAAAGCTTGAGCACAGGCAGAAGGGCATGAAATGTGACTGGATCCCCAGGCAGGCTGGACTGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000485758.1 |
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| CDS CCA 90 bp | CATTGTTTCCTACGTCTGAAACATTTCCTGATCTGCCTTCTTCCTTaGTCAGGCTCTTATTTTTCATGTCCTAACAGTTCTCACTGCCTA | + |
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Preference number: 5 (lower is better) Translates to: HCFLRLKHFLICLLP*SGSYFSCPNSSHCL Trigger: TAGGCAGTGAGAACTGTTAGGACATGAAAAATAAGAGCCTGACCAAGGAAGAAGGCAGATCAGGAAATGTTTCAGACGTAGGAAACAATG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000485758.1 |
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| CDS GCA 90 bp | AAGATCATTAACCATTGTTTCCTACGTCTGAAACATTTCCTGATCTaGCTTCTTCCTTGGTCAGGCTCTTATTTTTCATGTCCTAACAGT | + |
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Preference number: 5 (lower is better) Translates to: KIINHCFLRLKHFLI*LLPWSGSYFSCPNS Trigger: ACTGTTAGGACATGAAAAATAAGAGCCTGACCAAGGAAGAAGGCAGATCAGGAAATGTTTCAGACGTAGGAAACAATGGTTAATGATCTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000485758.1 |
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| CDS GCA 72 bp | CTCTTGGCGCTGCACAAAAACACCTCCTCCCTCTGGTaGCAAGTGGCCCTCCAGCCAGGCGCTTCTGCCTTC | + |
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Preference number: 6 (lower is better) Translates to: LLALHKNTSSLW*QVALQPGASAF Trigger: GAAGGCAGAAGCGCCTGGCTGGAGGGCCACTTGGCACCAGAGGGAGGAGGTGTTTTTGTGCAGCGCCAAGAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000485758.1 |
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| CDS CCA 72 bp | CCAGGCGCTTCTGCCTTCTGGCCAGTCCAGCCTGCCTaGGGATCCAGTCACATTTCATGCCCTTCTGCCTGT | + |
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Preference number: 6 (lower is better) Translates to: PGASAFWPVQPA*GSSHISCPSAC Trigger: ACAGGCAGAAGGGCATGAAATGTGACTGGATCCCCAGGCAGGCTGGACTGGCCAGAAGGCAGAAGCGCCTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000485758.1 |
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| CDS GCA 72 bp | GCCTGCCTGGGGATCCAGTCACATTTCATGCCCTTCTaGCTGTGCTCAAGCTTTGTCCTCTGCTCGCATGTC | + |
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Preference number: 6 (lower is better) Translates to: ACLGIQSHFMPF*LCSSFVLCSHV Trigger: GACATGCGAGCAGAGGACAAAGCTTGAGCACAGGCAGAAGGGCATGAAATGTGACTGGATCCCCAGGCAGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000485758.1 |
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| CDS GCA 72 bp | TTCACAGATAAGCAGGATTCTACATCCGGCCCCCAGTaGGTCTCGGAAGAGCTCCCGCTCCGAAACAAAGCT | + |
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Preference number: 6 (lower is better) Translates to: FTDKQDSTSGPQ*VSEELPLRNKA Trigger: AGCTTTGTTTCGGAGCGGGAGCTCTTCCGAGACGCACTGGGGGCCGGATGTAGAATCCTGCTTATCTGTGAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000318190.7 ENST00000463231.5 ENST00000484969.5 |
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| CDS GCA 72 bp | CATTTCACAGATAAGCAGGATTCATCCGGCCCCCAGTaGGTCTCGGAAGAGCTCCCGCTCCGAAACAAAGCT | + |
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Preference number: 6 (lower is better) Translates to: HFTDKQDSSGPQ*VSEELPLRNKA Trigger: AGCTTTGTTTCGGAGCGGGAGCTCTTCCGAGACGCACTGGGGGCCGGATGAATCCTGCTTATCTGTGAAATG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000409716.6 ENST00000462166.1 |
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| CDS GCA 72 bp | TTCATGCCCTTCTGCCTGTGCTCAAGCTTTGTCCTCTaGTCGCATGTCCCTTCTCCTCATGGCTTGGCTGCT | + |
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Preference number: 6 (lower is better) Translates to: FMPFCLCSSFVL*SHVPSPHGLAA Trigger: AGCAGCCAAGCCATGAGGAGAAGGGACATGCGAGCAGAGGACAAAGCTTGAGCACAGGCAGAAGGGCATGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000485758.1 |
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| CDS GCA 72 bp | CTTGTTCCTATGGAATCAAGCCCAGCCTCTTGGCGCTaGACAAAAACACCTCCTCCCTCTGGTGCCAAGTGG | + |
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Preference number: 6 (lower is better) Translates to: LVPMESSPASWR*TKTPPPSGAKW Trigger: CCACTTGGCACCAGAGGGAGGAGGTGTTTTTGTGCAGCGCCAAGAGGCTGGGCTTGATTCCATAGGAACAAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000485758.1 |
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| CDS CAA 72 bp | AGTCACATTTCATGCCCTTCTGCCTGTGCTCAAGCTTaGTCCTCTGCTCGCATGTCCCTTCTCCTCATGGCT | + |
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Preference number: 6 (lower is better) Translates to: SHISCPSACAQA*SSARMSLLLMA Trigger: AGCCATGAGGAGAAGGGACATGCGAGCAGAGGACAAAGCTTGAGCACAGGCAGAAGGGCATGAAATGTGACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000485758.1 |
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| CDS TCA 72 bp | TTCCAGCGCTTTGGGAGGCGCAGCAGAAGCATCACTTaGGTCCAGGATTTTGAGACCAATCTGGGCAACATA | + |
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Preference number: 6 (lower is better) Translates to: FQRFGRRSRSIT*VQDFETNLGNI Trigger: TATGTTGCCCAGATTGGTCTCAAAATCCTGGACTCAAGTGATGCTTCTGCTGCGCCTCCCAAAGCGCTGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000463231.5 ENST00000489476.5 |
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| CDS GCA 72 bp | TCCAACATCCATTGGCACTTCCTCAAAAGCACTCCCTaGTTAAAGGTACGCCTTGTTCCTATGGAATCAAGC | + |
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Preference number: 6 (lower is better) Translates to: SNIHWHFLKSTP*LKVRLVPMESS Trigger: GCTTGATTCCATAGGAACAAGGCGTACCTTTAAGCAGGGAGTGCTTTTGAGGAAGTGCCAATGGATGTTGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000485758.1 |
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| CDS CAA 90 bp | CTCACTGCCTACTTTTTCACTTTAATGATTCCTTTCCAACATCCATaGGCACTTCCTCAAAAGCACTCCCTGCTTAAAGGTACGCCTTGT | + |
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Preference number: 6 (lower is better) Translates to: LTAYFFTLMIPFQHP*ALPQKHSLLKGTPC Trigger: ACAAGGCGTACCTTTAAGCAGGGAGTGCTTTTGAGGAAGTGCCAATGGATGTTGGAAAGGAATCATTAAAGTGAAAAAGTAGGCAGTGAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000485758.1 |
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| CDS CAA 90 bp | CAGAGCTCTCTTCACTATTATTTGGGTTTATTACTAACCACTGGCTaGCAGGAATTTAGCCTCCAACCCAACACTGAGGAACACATATGT | + |
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Preference number: 6 (lower is better) Translates to: QSSLHYYLGLLLTTG*QEFSLQPNTEEHIC Trigger: ACATATGTGTTCCTCAGTGTTGGGTTGGAGGCTAAATTCCTGCAAGCCAGTGGTTAGTAATAAACCCAAATAATAGTGAAGAGAGCTCTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000470012.1 |
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| CDS CAA 90 bp | AGGGTTAAACCTCAACTCTCTGTCCAGAGCTCTCTTCACTATTATTaGGGTTTATTACTAACCACTGGCTTGCAGGAATTTAGCCTCCAA | + |
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Preference number: 6 (lower is better) Translates to: RVKPQLSVQSSLHYY*GLLLTTGLQEFSLQ Trigger: TTGGAGGCTAAATTCCTGCAAGCCAGTGGTTAGTAATAAACCCAAATAATAGTGAAGAGAGCTCTGGACAGAGAGTTGAGGTTTAACCCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000470012.1 |
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| CDS CAA 72 bp | CTTCACTATTATTTGGGTTTATTACTAACCACTGGCTaGCAGGAATTTAGCCTCCAACCCAACACTGAGGAA | + |
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Preference number: 6 (lower is better) Translates to: LHYYLGLLLTTG*QEFSLQPNTEE Trigger: TTCCTCAGTGTTGGGTTGGAGGCTAAATTCCTGCAAGCCAGTGGTTAGTAATAAACCCAAATAATAGTGAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000470012.1 |
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