RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TPRA1 (Homo sapiens)

Ensembl gene IDs: ENSG00000163870

Ensembl transcript IDs: ENST00000296210.11, ENST00000355552.8, ENST00000393400.6, ENST00000450633.6, ENST00000462228.1, ENST00000465915.1, ENST00000469111.5, ENST00000483868.5, ENST00000489960.5, ENST00000490290.5, ENST00000490643.5, ENST00000648957.1

Found 720 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GTTGGCCCTGTCCGCTATCAACCCTCCAGGCCCTCCCAGGGAGCCTaGCACATTGGCCCCACAGACATGAGCTGTGTTGGAGCTTGTGCC +
Preference number: 1 (lower is better)
Translates to: VGPVRYQPSRPSQGA*HIGPTDMSCVGACA
Trigger: GGCACAAGCTCCAACACAGCTCATGTCTGTGGGGCCAATGTGTCAGGCTCCCTGGGAGGGCCTGGAGGGTTGATAGCGGACAGGGCCAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355552.8
ENST00000648957.1
3UTR CCA 90 bp AAGGGTGCAGAGAAGGAGGGTGCCCTCAGCCAACCTTGCCAAGCATaGCCCTGGAAGGAAAGCCTGGGCCATGTCACTGAGCAGTATGAG +
Preference number: 1 (lower is better)
Translates to: KGAEKEGALSQPCQA*PWKESLGHVTEQYE
Trigger: CTCATACTGCTCAGTGACATGGCCCAGGCTTTCCTTCCAGGGCCATGCTTGGCAAGGTTGGCTGAGGGCACCCTCCTTCTCTGCACCCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000483868.5
ENST00000489960.5
ENST00000648957.1
3UTR CCA 90 bp GCATGCAGTTGGCTGTGTCCTGGATGGGCTCCTCCTCTCCAACTCTaGGGATTACATAACTGGCAGCAACTCCCTTTCACTCTGGCTGCC +
Preference number: 1 (lower is better)
Translates to: ACSWLCPGWAPPLQL*GLHNWQQLPFTLAA
Trigger: GGCAGCCAGAGTGAAAGGGAGTTGCTGCCAGTTATGTAATCCCCAGAGTTGGAGAGGAGGAGCCCATCCAGGACACAGCCAACTGCATGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355552.8
ENST00000648957.1
3UTR CCA 90 bp GAGACCTCCCCAGGCTCTGAAGCATGCAGTTGGCTGTGTCCTGGATaGGCTCCTCCTCTCCAACTCTGGGGATTACATAACTGGCAGCAA +
Preference number: 1 (lower is better)
Translates to: ETSPGSEACSWLCPG*APPLQLWGLHNWQQ
Trigger: TTGCTGCCAGTTATGTAATCCCCAGAGTTGGAGAGGAGGAGCCCATCCAGGACACAGCCAACTGCATGCTTCAGAGCCTGGGGAGGTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355552.8
ENST00000648957.1
3UTR TCA 90 bp GAGCTGAGCAGAGAGAACCGGCTGCCCAAGACAACAGTGTGTGTCTaGCAAAGGGAGAGGGGCTGGCTCACAAAACATAGTTCTCCTCTC +
Preference number: 1 (lower is better)
Translates to: ELSRENRLPKTTVCV*QRERGWLTKHSSPL
Trigger: GAGAGGAGAACTATGTTTTGTGAGCCAGCCCCTCTCCCTTTGTCAGACACACACTGTTGTCTTGGGCAGCCGGTTCTCTCTGCTCAGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355552.8
ENST00000648957.1
3UTR CCA 90 bp AGAGGGATGATATACACATCCGTTGGTGTGAACACAGGATGGCTCTaGAAGGTTATGGAGACCCTGGGTGCTTCAGGAGGGGGACAGAGG +
Preference number: 1 (lower is better)
Translates to: RGMIYTSVGVNTGWL*KVMETLGASGGGQR
Trigger: CCTCTGTCCCCCTCCTGAAGCACCCAGGGTCTCCATAACCTTCCAGAGCCATCCTGTGTTCACACCAACGGATGTGTATATCATCCCTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355552.8
ENST00000648957.1
3UTR CCA 90 bp TGTCCTGGATGGGCTCCTCCTCTCCAACTCTGGGGATTACATAACTaGCAGCAACTCCCTTTCACTCTGGCTGCCAAAAAGCTCAAAGCC +
Preference number: 1 (lower is better)
Translates to: CPGWAPPLQLWGLHN*QQLPFTLAAKKLKA
Trigger: GGCTTTGAGCTTTTTGGCAGCCAGAGTGAAAGGGAGTTGCTGCCAGTTATGTAATCCCCAGAGTTGGAGAGGAGGAGCCCATCCAGGACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355552.8
ENST00000648957.1
3UTR GCA 90 bp TTATGGAGACCCTGGGTGCTTCAGGAGGGGGACAGAGGAATTCAGTaGCACACAGGGAGATTTATCGTTCACCAAATACCCTCCTGTACT +
Preference number: 1 (lower is better)
Translates to: LWRPWVLQEGDRGIQ*HTGRFIVHQIPSCT
Trigger: AGTACAGGAGGGTATTTGGTGAACGATAAATCTCCCTGTGTGGCACTGAATTCCTCTGTCCCCCTCCTGAAGCACCCAGGGTCTCCATAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355552.8
ENST00000648957.1
3UTR GCA 90 bp AAAAATGGTCTCTTTTCTTCTGTTGATGCCTCTCTGCTCATTCACTaGAGCCAGCAAACTTCGGCTGACACTGTGCCATCTTGGACTGCA +
Preference number: 1 (lower is better)
Translates to: KNGLFSSVDASLLIH*SQQTSADTVPSWTA
Trigger: TGCAGTCCAAGATGGCACAGTGTCAGCCGAAGTTTGCTGGCTGCAGTGAATGAGCAGAGAGGCATCAACAGAAGAAAAGAGACCATTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355552.8
ENST00000648957.1
3UTR-3UTR TCA 90 bp GGGATTGGGAGCCCCAGGGAGGTGGGGCCTCCAGACTCATGGTGGGAACAGGGCGCTGCCCTCAGGCATTaGTGGCCTTCCAGCGCTCGC +
Preference number: 2 (lower is better)
Translates to: GIGSPREVGPPDSWWEQGAALRH*WPSSAR
Trigger: GCGAGCGCTGGAAGGCCATCAATGCCTGAGGGCAGC...GCCCTGTTCCCACCATGAGTCTGGAGGCCCCACCTCCCTGGGGCTCCCAATCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296210.11
ENST00000393400.6
ENST00000483868.5
3UTR-3UTR CCA 90 bp GGGAGAGCCAGCCCTGCCCTCGTGCCAAGGGTGCAGAGAAGGAGGGTGCCCTCAGGACTCTGGGCCTGCTaGCCTCCTCTCTGGCCTGTC +
Preference number: 2 (lower is better)
Translates to: GRASPALVPRVQRRRVPSGLWAC*PPLWPV
Trigger: GACAGGCCAGAGAGGAGGCCAGCAGGCCCAGAGTCC...TGAGGGCACCCTCCTTCTCTGCACCCTTGGCACGAGGGCAGGGCTGGCTCTCCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000483868.5
ENST00000489960.5
ENST00000648957.1
3UTR-3UTR TCA 90 bp GATTGGGAGCCCCAGGGAGGTGGGGCCTCCAGACTCATGGTGGGAACAGGGCCACCACAGAACGTCCCTTaGCCTGGTCCTCCTCCCCTG +
Preference number: 2 (lower is better)
Translates to: DWEPQGGGASRLMVGTGPPQNVP*PGPPPL
Trigger: CAGGGGAGGAGGACCAGGTCAAGGGACGTTCTGTGG...TGGCCCTGTTCCCACCATGAGTCTGGAGGCCCCACCTCCCTGGGGCTCCCAATC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000483868.5
ENST00000489960.5
ENST00000648957.1
3UTR-3UTR CCA 90 bp GATTGGGAGCCCCAGGGAGGTGGGGCCTCCAGACTCATGGTGGGAACAGGGCCAGAACGTCCCTTGACCTaGTCCTCCTCCCCTGGGGAC +
Preference number: 2 (lower is better)
Translates to: DWEPQGGGASRLMVGTGPERPLT*SSSPGD
Trigger: GTCCCCAGGGGAGGAGGACCAGGTCAAGGGACGTTC...TGGCCCTGTTCCCACCATGAGTCTGGAGGCCCCACCTCCCTGGGGCTCCCAATC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000483868.5
ENST00000489960.5
ENST00000648957.1
3UTR-3UTR CCA 90 bp GGGAGAGCCAGCCCTGCCCTCGTGCCAAGGGTGCAGAGAAGGAGGGTGCCCTCACCTCCAGACTCATGGTaGGAACAGGGCCACACAGGG +
Preference number: 2 (lower is better)
Translates to: GRASPALVPRVQRRRVPSPPDSW*EQGHTG
Trigger: CCCTGTGTGGCCCTGTTCCCACCATGAGTCTGGAGG...TGAGGGCACCCTCCTTCTCTGCACCCTTGGCACGAGGGCAGGGCTGGCTCTCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000483868.5
ENST00000489960.5
ENST00000648957.1
3UTR-3UTR TCA 90 bp TGCTGCCAGTGTGGCAGGGCATGGAAGCGATGTCATCCAGGTAGGCCACCCCGCCCACAGAACGTCCCTTaGCCTGGTCCTCCTCCCCTG +
Preference number: 2 (lower is better)
Translates to: CCQCGRAWKRCHPGRPPRPQNVP*PGPPPL
Trigger: CAGGGGAGGAGGACCAGGTCAAGGGACGTTCTGTGG...GCGGGGTGGCCTACCTGGATGACATCGCTTCCATGCCCTGCCACACTGGCAGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393400.6
ENST00000483868.5
3UTR-3UTR CCA 90 bp GGCCCTGGAAGGAAAGCCTGGGCCATGTCACTGAGCAGTATGAGAGCAGGTGGGCTGGTCCTCCTCCCCTaGGGACTCTGGGCCTGCTGG +
Preference number: 2 (lower is better)
Translates to: GPGRKAWAMSLSSMRAGGLVLLP*GLWACW
Trigger: CCAGCAGGCCCAGAGTCCCCAGGGGAGGAGGACCAG...CCCACCTGCTCTCATACTGCTCAGTGACATGGCCCAGGCTTTCCTTCCAGGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000483868.5
ENST00000489960.5
ENST00000648957.1
3UTR-3UTR CCA 90 bp CTCCAGACTCATGGTGGGAACAGGGCCACACAGGGCTACTGCCCACAGAACGTCCTGGTCCTCCTCCCCTaGGGACTCTGGGCCTGCTGG +
Preference number: 2 (lower is better)
Translates to: LQTHGGNRATQGYCPQNVLVLLP*GLWACW
Trigger: CCAGCAGGCCCAGAGTCCCCAGGGGAGGAGGACCAG...GACGTTCTGTGGGCAGTAGCCCTGTGTGGCCCTGTTCCCACCATGAGTCTGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000483868.5
ENST00000489960.5
ENST00000648957.1
3UTR-3UTR CCA 90 bp TCCAGCTCACTGGCCGTACTGTTGGCCCTGTCCGCTATCAACCCTCCAGGCCCTGGAGCCCCAGGGAGGTaGGGCCTCCAGACTCATGGT +
Preference number: 2 (lower is better)
Translates to: SSSLAVLLALSAINPPGPGAPGR*GLQTHG
Trigger: ACCATGAGTCTGGAGGCCCCACCTCCCTGGGGCTCC...AGGGCCTGGAGGGTTGATAGCGGACAGGGCCAACAGTACGGCCAGTGAGCTGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355552.8
ENST00000648957.1
3UTR-3UTR TCA 90 bp GTGGGAACAGGGCCACACAGGGCTACTGCCCACAGAACGTCCCTTGACCTGGTCCCACAGAACGTCCCTTaGCCTGGTCCTCCTCCCCTG +
Preference number: 2 (lower is better)
Translates to: VGTGPHRATAHRTSLDLVPQNVP*PGPPPL
Trigger: CAGGGGAGGAGGACCAGGTCAAGGGACGTTCTGTGG...GACCAGGTCAAGGGACGTTCTGTGGGCAGTAGCCCTGTGTGGCCCTGTTCCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000483868.5
ENST00000489960.5
ENST00000648957.1
3UTR-3UTR GCA 90 bp GCTCACTGGCCGTACTGTTGGCCCTGTCCGCTATCAACCCTCCAGGCCCTCCCACTGTGTTGGAGCTTGTaGCCTCGGCACCCCATTCCC +
Preference number: 2 (lower is better)
Translates to: AHWPYCWPCPLSTLQALPLCWSL*PRHPIP
Trigger: GGGAATGGGGTGCCGAGGGCACAAGCTCCAACACAG...TGGGAGGGCCTGGAGGGTTGATAGCGGACAGGGCCAACAGTACGGCCAGTGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355552.8
ENST00000648957.1
3UTR-3UTR CCA 90 bp TCCAGCTCACTGGCCGTACTGTTGGCCCTGTCCGCTATCAACCCTCCAGGCCCTGAACGTCCCTTGACCTaGTCCTCCTCCCCTGGGGAC +
Preference number: 2 (lower is better)
Translates to: SSSLAVLLALSAINPPGPERPLT*SSSPGD
Trigger: GTCCCCAGGGGAGGAGGACCAGGTCAAGGGACGTTC...AGGGCCTGGAGGGTTGATAGCGGACAGGGCCAACAGTACGGCCAGTGAGCTGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355552.8
ENST00000648957.1
3UTR-3UTR CCA 90 bp TGCTGCCAGTGTGGCAGGGCATGGAAGCGATGTCATCCAGGTAGGCCACCCCGCGGGCCTCCAGACTCATaGTGGGAACAGGGCCACACA +
Preference number: 2 (lower is better)
Translates to: CCQCGRAWKRCHPGRPPRGPPDS*WEQGHT
Trigger: TGTGTGGCCCTGTTCCCACCATGAGTCTGGAGGCCC...GCGGGGTGGCCTACCTGGATGACATCGCTTCCATGCCCTGCCACACTGGCAGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393400.6
ENST00000483868.5
3UTR-3UTR CCA 90 bp AGCCTGGGCCATGTCACTGAGCAGTATGAGAGCAGGTGGGAAGGGGAGGAGGGTGGAGCCCCAGGGAGGTaGGGCCTCCAGACTCATGGT +
Preference number: 2 (lower is better)
Translates to: SLGHVTEQYESRWEGEEGGAPGR*GLQTHG
Trigger: ACCATGAGTCTGGAGGCCCCACCTCCCTGGGGCTCC...ACCCTCCTCCCCTTCCCACCTGCTCTCATACTGCTCAGTGACATGGCCCAGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000483868.5
ENST00000489960.5
ENST00000648957.1
3UTR-3UTR CCA 90 bp GTGGGAACAGGGCCACACAGGGCTACTGCCCACAGAACGTCCCTTGACCTGGTCGATGGCAAAGGGGATTaGGAGCCCCAGGGAGGTGGG +
Preference number: 2 (lower is better)
Translates to: VGTGPHRATAHRTSLDLVDGKGD*EPQGGG
Trigger: CCCACCTCCCTGGGGCTCCCAATCCCCTTTGCCATC...GACCAGGTCAAGGGACGTTCTGTGGGCAGTAGCCCTGTGTGGCCCTGTTCCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000483868.5
ENST00000489960.5
ENST00000648957.1
3UTR-3UTR TCA 90 bp GTGGGAACAGGGCCACACAGGGCTACTGCCCACAGAACGTCCCTTGACCTGGTCCGCTGTCTGTGCTGTTaGTGCTGCCAGTGTGGCAGG +
Preference number: 2 (lower is better)
Translates to: VGTGPHRATAHRTSLDLVRCLCC*CCQCGR
Trigger: CCTGCCACACTGGCAGCATCAACAGCACAGACAGCG...GACCAGGTCAAGGGACGTTCTGTGGGCAGTAGCCCTGTGTGGCCCTGTTCCCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296210.11
ENST00000393400.6
ENST00000483868.5
3UTR-3UTR CCA 90 bp GTGGGAACAGGGCCACACAGGGCTACTGCCCACAGAACGTCCCTTGACCTGGTCGGGCCTCCAGACTCATaGTGGGAACAGGGCCACACA +
Preference number: 2 (lower is better)
Translates to: VGTGPHRATAHRTSLDLVGPPDS*WEQGHT
Trigger: TGTGTGGCCCTGTTCCCACCATGAGTCTGGAGGCCC...GACCAGGTCAAGGGACGTTCTGTGGGCAGTAGCCCTGTGTGGCCCTGTTCCCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000483868.5
ENST00000489960.5
ENST00000648957.1
3UTR-3UTR CCA 90 bp TCCAGCTCACTGGCCGTACTGTTGGCCCTGTCCGCTATCAACCCTCCAGGCCCTCAGTATGAGAGCAGGTaGGAAGGGGAGGAGGGTCCC +
Preference number: 2 (lower is better)
Translates to: SSSLAVLLALSAINPPGPQYESR*EGEEGP
Trigger: GGGACCCTCCTCCCCTTCCCACCTGCTCTCATACTG...AGGGCCTGGAGGGTTGATAGCGGACAGGGCCAACAGTACGGCCAGTGAGCTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355552.8
ENST00000648957.1
3UTR-3UTR TCA 90 bp GAAGCATGCAGTTGGCTGTGTCCTGGATGGGCTCCTCCTCTCCAACTCTGGGGACCACAGAACGTCCCTTaGCCTGGTCCTCCTCCCCTG +
Preference number: 2 (lower is better)
Translates to: EACSWLCPGWAPPLQLWGPQNVP*PGPPPL
Trigger: CAGGGGAGGAGGACCAGGTCAAGGGACGTTCTGTGG...TCCCCAGAGTTGGAGAGGAGGAGCCCATCCAGGACACAGCCAACTGCATGCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355552.8
ENST00000648957.1
3UTR-3UTR GCA 90 bp GAAGCATGCAGTTGGCTGTGTCCTGGATGGGCTCCTCCTCTCCAACTCTGGGGACCCTCGTGCCAAGGGTaGAGAGAAGGAGGGTGCCCT +
Preference number: 2 (lower is better)
Translates to: EACSWLCPGWAPPLQLWGPSCQG*REGGCP
Trigger: AGGGCACCCTCCTTCTCTGCACCCTTGGCACGAGGG...TCCCCAGAGTTGGAGAGGAGGAGCCCATCCAGGACACAGCCAACTGCATGCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355552.8
ENST00000648957.1
3UTR-3UTR CCA 90 bp ATCCACCATGGTGGATGCTTTGAGGAGGCCAAAGCACCATGGGGATGGGATGGACTGGTCCTCCTCCCCTaGGGACTCTGGGCCTGCTGG +
Preference number: 2 (lower is better)
Translates to: IHHGGCFEEAKAPWGWDGLVLLP*GLWACW
Trigger: CCAGCAGGCCCAGAGTCCCCAGGGGAGGAGGACCAG...TCCATCCCATCCCCATGGTGCTTTGGCCTCCTCAAAGCATCCACCATGGTGGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000648957.1
3UTR-3UTR CCA 90 bp GGAAGGAAAGCCTGGGCCATGTCACTGAGCAGTATGAGAGCAGGTGGGAAGGGGGAACGTCCCTTGACCTaGTCCTCCTCCCCTGGGGAC +
Preference number: 2 (lower is better)
Translates to: GRKAWAMSLSSMRAGGKGERPLT*SSSPGD
Trigger: GTCCCCAGGGGAGGAGGACCAGGTCAAGGGACGTTC...CCCCTTCCCACCTGCTCTCATACTGCTCAGTGACATGGCCCAGGCTTTCCTTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000483868.5
ENST00000489960.5
ENST00000648957.1
3UTR-3UTR CCA 90 bp TCCAGCTCACTGGCCGTACTGTTGGCCCTGTCCGCTATCAACCCTCCAGGCCCTCCGAGTCCTGTCTGCTaGGGGCCTACTATGTGCCAA +
Preference number: 2 (lower is better)
Translates to: SSSLAVLLALSAINPPGPPSPVC*GPTMCQ
Trigger: TTGGCACATAGTAGGCCCCCAGCAGACAGGACTCGG...AGGGCCTGGAGGGTTGATAGCGGACAGGGCCAACAGTACGGCCAGTGAGCTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355552.8
ENST00000648957.1
3UTR CAA 90 bp TGCCCTCAGGCATTGATGGCCTTCCAGCGCTCGCTGTCTGTGCTGTaGATGCTGCCAGTGTGGCAGGGCATGGAAGCGATGTCATCCAGG +
Preference number: 2 (lower is better)
Translates to: CPQALMAFQRSLSVL*MLPVWQGMEAMSSR
Trigger: CCTGGATGACATCGCTTCCATGCCCTGCCACACTGGCAGCATCAACAGCACAGACAGCGAGCGCTGGAAGGCCATCAATGCCTGAGGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393400.6
ENST00000483868.5
3UTR-3UTR TCA 90 bp CACTTCAGTCCATCCACCATGGTGGATGCTTTGAGGAGGCCAAAGCACCATGGGGCTGCCCTCAGGCATTaGTGGCCTTCCAGCGCTCGC +
Preference number: 2 (lower is better)
Translates to: HFSPSTMVDALRRPKHHGAALRH*WPSSAR
Trigger: GCGAGCGCTGGAAGGCCATCAATGCCTGAGGGCAGC...CCCATGGTGCTTTGGCCTCCTCAAAGCATCCACCATGGTGGATGGACTGAAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296210.11
ENST00000393400.6
3UTR-3UTR TCA 90 bp TGTGAACACAGGATGGCTCTGGAAGGTTATGGAGACCCTGGGTGCTTCAGGAGGAGGCGGGCAACAGCCTaGTCCTCAGGGTCCCCACAG +
Preference number: 2 (lower is better)
Translates to: CEHRMALEGYGDPGCFRRRRATA*SSGSPQ
Trigger: CTGTGGGGACCCTGAGGATCAGGCTGTTGCCCGCCT...CCTCCTGAAGCACCCAGGGTCTCCATAACCTTCCAGAGCCATCCTGTGTTCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355552.8
ENST00000648957.1
3UTR-3UTR TCA 90 bp GTGGGAACAGGGCCACACAGGGCTACTGCCCACAGAACGTCCCTTGACCTGGTCGCGGAGCGAAGAAGCTaGAGTACAGGAAGGTTGTGG +
Preference number: 2 (lower is better)
Translates to: VGTGPHRATAHRTSLDLVAERRS*STGRLW
Trigger: CCACAACCTTCCTGTACTTCAGCTTCTTCGCTCCGC...GACCAGGTCAAGGGACGTTCTGTGGGCAGTAGCCCTGTGTGGCCCTGTTCCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393400.6
ENST00000483868.5
3UTR-3UTR CCA 90 bp ATCCACCATGGTGGATGCTTTGAGGAGGCCAAAGCACCATGGGGATGGGATGGAGGAGCCCCAGGGAGGTaGGGCCTCCAGACTCATGGT +
Preference number: 2 (lower is better)
Translates to: IHHGGCFEEAKAPWGWDGGAPGR*GLQTHG
Trigger: ACCATGAGTCTGGAGGCCCCACCTCCCTGGGGCTCC...TCCATCCCATCCCCATGGTGCTTTGGCCTCCTCAAAGCATCCACCATGGTGGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000648957.1
3UTR-3UTR CCA 90 bp GTGGGAACAGGGCCACACAGGGCTACTGCCCACAGAACGTCCCTTGACCTGGTCCAACCTTGCCAAGCATaGCCCTGGAAGGAAAGCCTG +
Preference number: 2 (lower is better)
Translates to: VGTGPHRATAHRTSLDLVQPCQA*PWKESL
Trigger: CAGGCTTTCCTTCCAGGGCCATGCTTGGCAAGGTTG...GACCAGGTCAAGGGACGTTCTGTGGGCAGTAGCCCTGTGTGGCCCTGTTCCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000483868.5
ENST00000489960.5
ENST00000648957.1
3UTR-3UTR CCA 90 bp CTTCAGTCCATCCACCATGGTGGATGCTTTGAGGAGGCCAAAGCACCATGGGGAGCGTGCTCGAGTAGCTaGCAGCTGAGGCCCCAGCAG +
Preference number: 2 (lower is better)
Translates to: LQSIHHGGCFEEAKAPWGACSSS*QLRPQQ
Trigger: CTGCTGGGGCCTCAGCTGCCAGCTACTCGAGCACGC...TCCCCATGGTGCTTTGGCCTCCTCAAAGCATCCACCATGGTGGATGGACTGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393400.6
3UTR-3UTR TCA 90 bp CACTTCAGTCCATCCACCATGGTGGATGCTTTGAGGAGGCCAAAGCACCATGGGCCACAGAACGTCCCTTaGCCTGGTCCTCCTCCCCTG +
Preference number: 2 (lower is better)
Translates to: HFSPSTMVDALRRPKHHGPQNVP*PGPPPL
Trigger: CAGGGGAGGAGGACCAGGTCAAGGGACGTTCTGTGG...CCCATGGTGCTTTGGCCTCCTCAAAGCATCCACCATGGTGGATGGACTGAAGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000648957.1
3UTR-3UTR TCA 90 bp TGGCCCCACAGACATGAGCTGTGTTGGAGCTTGTGCCCTCGGCACCCCATTCCCCCACACCCATCCTTATaGCAAACATCAGTCCCCGAG +
Preference number: 2 (lower is better)
Translates to: WPHRHELCWSLCPRHPIPPHPSL*QTSVPE
Trigger: CTCGGGGACTGATGTTTGTCATAAGGATGGGTGTGG...GGGAATGGGGTGCCGAGGGCACAAGCTCCAACACAGCTCATGTCTGTGGGGCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000355552.8
ENST00000648957.1
3UTR-3UTR TCA 90 bp TCCAGACTCATGGTGGGAACAGGGCCACACAGGGCTACTGCCCACAGAACGTCCGCGGAGCGAAGAAGCTaGAGTACAGGAAGGTTGTGG +
Preference number: 2 (lower is better)
Translates to: SRLMVGTGPHRATAHRTSAERRS*STGRLW
Trigger: CCACAACCTTCCTGTACTTCAGCTTCTTCGCTCCGC...GGACGTTCTGTGGGCAGTAGCCCTGTGTGGCCCTGTTCCCACCATGAGTCTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393400.6
ENST00000483868.5
3UTR-3UTR GCA 90 bp CACTGCAGCCAGCAAACTTCGGCTGACACTGTGCCATCTTGGACTGCATGTGGACCCTCGTGCCAAGGGTaGAGAGAAGGAGGGTGCCCT +
Preference number: 2 (lower is better)
Translates to: HCSQQTSADTVPSWTACGPSCQG*REGGCP
Trigger: AGGGCACCCTCCTTCTCTGCACCCTTGGCACGAGGG...TCCACATGCAGTCCAAGATGGCACAGTGTCAGCCGAAGTTTGCTGGCTGCAGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355552.8
ENST00000648957.1
3UTR-3UTR GCA 90 bp TCCATCCACCATGGTGGATGCTTTGAGGAGGCCAAAGCACCATGGGGATGGGATCCAGCCCTGCCCTCGTaGCAAGGGTGCAGAGAAGGA +
Preference number: 2 (lower is better)
Translates to: SIHHGGCFEEAKAPWGWDPALPS*QGCREG
Trigger: TCCTTCTCTGCACCCTTGGCACGAGGGCAGGGCTGG...ATCCCATCCCCATGGTGCTTTGGCCTCCTCAAAGCATCCACCATGGTGGATGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000648957.1
3UTR-3UTR CCA 90 bp GGCCCTGGAAGGAAAGCCTGGGCCATGTCACTGAGCAGTATGAGAGCAGGTGGGTTGATGCTGCCAGTGTaGCAGGGCATGGAAGCGATG +
Preference number: 2 (lower is better)
Translates to: GPGRKAWAMSLSSMRAGGLMLPV*QGMEAM
Trigger: CATCGCTTCCATGCCCTGCCACACTGGCAGCATCAA...CCCACCTGCTCTCATACTGCTCAGTGACATGGCCCAGGCTTTCCTTCCAGGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296210.11
ENST00000393400.6
ENST00000483868.5
3UTR-3UTR CCA 90 bp ATCCACCATGGTGGATGCTTTGAGGAGGCCAAAGCACCATGGGGATGGGATGGAGAACGTCCCTTGACCTaGTCCTCCTCCCCTGGGGAC +
Preference number: 2 (lower is better)
Translates to: IHHGGCFEEAKAPWGWDGERPLT*SSSPGD
Trigger: GTCCCCAGGGGAGGAGGACCAGGTCAAGGGACGTTC...TCCATCCCATCCCCATGGTGCTTTGGCCTCCTCAAAGCATCCACCATGGTGGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000648957.1
3UTR-3UTR CCA 90 bp AGTCCATCCACCATGGTGGATGCTTTGAGGAGGCCAAAGCACCATGGGGATGGGCCTCCAGACTCATGGTaGGAACAGGGCCACACAGGG +
Preference number: 2 (lower is better)
Translates to: SPSTMVDALRRPKHHGDGPPDSW*EQGHTG
Trigger: CCCTGTGTGGCCCTGTTCCCACCATGAGTCTGGAGG...CCCATCCCCATGGTGCTTTGGCCTCCTCAAAGCATCCACCATGGTGGATGGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000648957.1
3UTR-3UTR CCA 90 bp TCCATCCACCATGGTGGATGCTTTGAGGAGGCCAAAGCACCATGGGGATGGGATGATGGCAAAGGGGATTaGGAGCCCCAGGGAGGTGGG +
Preference number: 2 (lower is better)
Translates to: SIHHGGCFEEAKAPWGWDDGKGD*EPQGGG
Trigger: CCCACCTCCCTGGGGCTCCCAATCCCCTTTGCCATC...ATCCCATCCCCATGGTGCTTTGGCCTCCTCAAAGCATCCACCATGGTGGATGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000648957.1
3UTR-3UTR CCA 90 bp CCTTACCCCGCTCACTCAGAATGCCGTGAGCTTGCCTTCCCTGATTACCAGGCTAGTGGCAGGGACAAGTaGGCCCCTCTCCCCTACTCA +
Preference number: 2 (lower is better)
Translates to: PYPAHSECRELAFPDYQASGRDK*APLPYS
Trigger: TGAGTAGGGGAGAGGGGCCCACTTGTCCCTGCCACT...AGCCTGGTAATCAGGGAAGGCAAGCTCACGGCATTCTGAGTGAGCGGGGTAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355552.8
ENST00000648957.1
3UTR-3UTR CCA 90 bp GGCCCTGGAAGGAAAGCCTGGGCCATGTCACTGAGCAGTATGAGAGCAGGTGGGAGGAGAAGAGGATCTTaGGCTCCGAGCCGAAGAAGC +
Preference number: 2 (lower is better)
Translates to: GPGRKAWAMSLSSMRAGGRRRGS*APSRRS
Trigger: GCTTCTTCGGCTCGGAGCCCAAGATCCTCTTCTCCT...CCCACCTGCTCTCATACTGCTCAGTGACATGGCCCAGGCTTTCCTTCCAGGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393400.6
ENST00000483868.5
3UTR-3UTR TCA 90 bp GGTGTACATCTGGCTCCTCTGTCTCGTCCACTTGGCATTTGTAGGAGAAGAGGAGCTGCCCTCAGGCATTaGTGGCCTTCCAGCGCTCGC +
Preference number: 2 (lower is better)
Translates to: GVHLAPLSRPLGICRRRGAALRH*WPSSAR
Trigger: GCGAGCGCTGGAAGGCCATCAATGCCTGAGGGCAGC...TCCTCTTCTCCTACAAATGCCAAGTGGACGAGACAGAGGAGCCAGATGTACACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393400.6
ENST00000483868.5
3UTR-3UTR TCA 90 bp CAGCAAACTTCGGCTGACACTGTGCCATCTTGGACTGCATGTGGATCTGATGGTCCCTCCCAGGGAGCCTaGCACATTGGCCCCACAGAC +
Preference number: 2 (lower is better)
Translates to: QQTSADTVPSWTACGSDGPSQGA*HIGPTD
Trigger: GTCTGTGGGGCCAATGTGTCAGGCTCCCTGGGAGGG...ACCATCAGATCCACATGCAGTCCAAGATGGCACAGTGTCAGCCGAAGTTTGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355552.8
ENST00000648957.1
3UTR-3UTR GCA 90 bp CAGTCCATCCACCATGGTGGATGCTTTGAGGAGGCCAAAGCACCATGGGGATGGCAGAGTCGAACTGCGTaGTCGAGTAGCTGGCAGCTG +
Preference number: 2 (lower is better)
Translates to: QSIHHGGCFEEAKAPWGWQSRTA*SSSWQL
Trigger: CAGCTGCCAGCTACTCGAGCACGCAGTTCGACTCTG...CCATCCCCATGGTGCTTTGGCCTCCTCAAAGCATCCACCATGGTGGATGGACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393400.6
3UTR-3UTR CCA 90 bp ACACTTCAGTCCATCCACCATGGTGGATGCTTTGAGGAGGCCAAAGCACCATGGGAACGTCCCTTGACCTaGTCCTCCTCCCCTGGGGAC +
Preference number: 2 (lower is better)
Translates to: TLQSIHHGGCFEEAKAPWERPLT*SSSPGD
Trigger: GTCCCCAGGGGAGGAGGACCAGGTCAAGGGACGTTC...CCATGGTGCTTTGGCCTCCTCAAAGCATCCACCATGGTGGATGGACTGAAGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000648957.1
3UTR-3UTR CCA 90 bp ATCCACCATGGTGGATGCTTTGAGGAGGCCAAAGCACCATGGGGATGGGATGGACCTCCAGACTCATGGTaGGAACAGGGCCACACAGGG +
Preference number: 2 (lower is better)
Translates to: IHHGGCFEEAKAPWGWDGPPDSW*EQGHTG
Trigger: CCCTGTGTGGCCCTGTTCCCACCATGAGTCTGGAGG...TCCATCCCATCCCCATGGTGCTTTGGCCTCCTCAAAGCATCCACCATGGTGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000648957.1
3UTR-3UTR CCA 90 bp ATCCACCATGGTGGATGCTTTGAGGAGGCCAAAGCACCATGGGGATGGGATGGAGGGCCTCCAGACTCATaGTGGGAACAGGGCCACACA +
Preference number: 2 (lower is better)
Translates to: IHHGGCFEEAKAPWGWDGGPPDS*WEQGHT
Trigger: TGTGTGGCCCTGTTCCCACCATGAGTCTGGAGGCCC...TCCATCCCATCCCCATGGTGCTTTGGCCTCCTCAAAGCATCCACCATGGTGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000648957.1
3UTR-3UTR CCA 90 bp CCTTACCCCGCTCACTCAGAATGCCGTGAGCTTGCCTTCCCTGATTACCAGGCTAGGGGCAGCGGCAGCTaGGATCCTGTTTCTCTTCAC +
Preference number: 2 (lower is better)
Translates to: PYPAHSECRELAFPDYQARGSGS*DPVSLH
Trigger: GTGAAGAGAAACAGGATCCCAGCTGCCGCTGCCCCT...AGCCTGGTAATCAGGGAAGGCAAGCTCACGGCATTCTGAGTGAGCGGGGTAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355552.8
ENST00000648957.1
3UTR-3UTR CCA 90 bp CCAACCCTTACCCCGCTCACTCAGAATGCCGTGAGCTTGCCTTCCCTGATTACCCCGAGTCCTGTCTGCTaGGGGCCTACTATGTGCCAA +
Preference number: 2 (lower is better)
Translates to: PTLTPLTQNAVSLPSLITPSPVC*GPTMCQ
Trigger: TTGGCACATAGTAGGCCCCCAGCAGACAGGACTCGG...GGTAATCAGGGAAGGCAAGCTCACGGCATTCTGAGTGAGCGGGGTAAGGGTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355552.8
ENST00000648957.1
3UTR-3UTR TCA 90 bp TCCAGCTCACTGGCCGTACTGTTGGCCCTGTCCGCTATCAACCCTCCAGGCCCTCCCAGTGCTTTGCTCTaGTTTACTCCCATTTTCAGC +
Preference number: 2 (lower is better)
Translates to: SSSLAVLLALSAINPPGPPSALL*FTPIFS
Trigger: GCTGAAAATGGGAGTAAATCAGAGCAAAGCACTGGG...AGGGCCTGGAGGGTTGATAGCGGACAGGGCCAACAGTACGGCCAGTGAGCTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355552.8
ENST00000648957.1
3UTR-3UTR GCA 90 bp GCCCTCAGGCTCCTGAAAGGAACCAGCCCCAGTATTCCTGCAAAACCTCCACATTGCAGAGAAGGAGGGTaGCCTCAGCCAACCTTGCCA +
Preference number: 2 (lower is better)
Translates to: ALRLLKGTSPSIPAKPPHCREGG*PQPTLP
Trigger: TGGCAAGGTTGGCTGAGGGCACCCTCCTTCTCTGCA...ATGTGGAGGTTTTGCAGGAATACTGGGGCTGGTTCCTTTCAGGAGCCTGAGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355552.8
ENST00000648957.1
3UTR-3UTR GCA 90 bp TGTGAACACAGGATGGCTCTGGAAGGTTATGGAGACCCTGGGTGCTTCAGGAGGTTGGGCACTGGGGACTaGTCCTTGGTTGAGCAGAGG +
Preference number: 2 (lower is better)
Translates to: CEHRMALEGYGDPGCFRRLGTGD*SLVEQR
Trigger: CCTCTGCTCAACCAAGGAGCAGTCCCCAGTGCCCAA...CCTCCTGAAGCACCCAGGGTCTCCATAACCTTCCAGAGCCATCCTGTGTTCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355552.8
ENST00000648957.1
3UTR-3UTR CCA 90 bp AGTCCATCCACCATGGTGGATGCTTTGAGGAGGCCAAAGCACCATGGGGATGGGTTGATGCTGCCAGTGTaGCAGGGCATGGAAGCGATG +
Preference number: 2 (lower is better)
Translates to: SPSTMVDALRRPKHHGDGLMLPV*QGMEAM
Trigger: CATCGCTTCCATGCCCTGCCACACTGGCAGCATCAA...CCCATCCCCATGGTGCTTTGGCCTCCTCAAAGCATCCACCATGGTGGATGGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296210.11
ENST00000393400.6
3UTR-3UTR CCA 90 bp ACACTTCAGTCCATCCACCATGGTGGATGCTTTGAGGAGGCCAAAGCACCATGGGGGCCTCCAGACTCATaGTGGGAACAGGGCCACACA +
Preference number: 2 (lower is better)
Translates to: TLQSIHHGGCFEEAKAPWGPPDS*WEQGHT
Trigger: TGTGTGGCCCTGTTCCCACCATGAGTCTGGAGGCCC...CCATGGTGCTTTGGCCTCCTCAAAGCATCCACCATGGTGGATGGACTGAAGTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000648957.1
3UTR-3UTR CCA 90 bp CCAACCCTTACCCCGCTCACTCAGAATGCCGTGAGCTTGCCTTCCCTGATTACCCCTGGAAGGAAAGCCTaGGCCATGTCACTGAGCAGT +
Preference number: 2 (lower is better)
Translates to: PTLTPLTQNAVSLPSLITPGRKA*AMSLSS
Trigger: ACTGCTCAGTGACATGGCCCAGGCTTTCCTTCCAGG...GGTAATCAGGGAAGGCAAGCTCACGGCATTCTGAGTGAGCGGGGTAAGGGTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355552.8
ENST00000648957.1
3UTR-3UTR CCA 90 bp CATTGGCCCCACAGACATGAGCTGTGTTGGAGCTTGTGCCCTCGGCACCCCATTTCTGAAGCATGCAGTTaGCTGTGTCCTGGATGGGCT +
Preference number: 2 (lower is better)
Translates to: HWPHRHELCWSLCPRHPISEACS*LCPGWA
Trigger: AGCCCATCCAGGACACAGCCAACTGCATGCTTCAGA...AATGGGGTGCCGAGGGCACAAGCTCCAACACAGCTCATGTCTGTGGGGCCAATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355552.8
ENST00000648957.1
3UTR-3UTR CCA 90 bp CACTGCAGCCAGCAAACTTCGGCTGACACTGTGCCATCTTGGACTGCATGTGGACACTGGCCGTACTGTTaGCCCTGTCCGCTATCAACC +
Preference number: 2 (lower is better)
Translates to: HCSQQTSADTVPSWTACGHWPYC*PCPLST
Trigger: GGTTGATAGCGGACAGGGCCAACAGTACGGCCAGTG...TCCACATGCAGTCCAAGATGGCACAGTGTCAGCCGAAGTTTGCTGGCTGCAGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355552.8
ENST00000648957.1
3UTR-3UTR GCA 90 bp CACTGCAGCCAGCAAACTTCGGCTGACACTGTGCCATCTTGGACTGCATGTGGAGCAGAGAGAACCGGCTaGCCAAGACAACAGTGTGTG +
Preference number: 2 (lower is better)
Translates to: HCSQQTSADTVPSWTACGAERTG*PRQQCV
Trigger: CACACACTGTTGTCTTGGGCAGCCGGTTCTCTCTGC...TCCACATGCAGTCCAAGATGGCACAGTGTCAGCCGAAGTTTGCTGGCTGCAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355552.8
ENST00000648957.1
3UTR-3UTR CCA 90 bp CTCTGTCTCGTCCACTTGGCATTTGTAGGAGAAGAGGATCTTGGGCTCCGAGCCTTGATGCTGCCAGTGTaGCAGGGCATGGAAGCGATG +
Preference number: 2 (lower is better)
Translates to: LCLVHLAFVGEEDLGLRALMLPV*QGMEAM
Trigger: CATCGCTTCCATGCCCTGCCACACTGGCAGCATCAA...GGCTCGGAGCCCAAGATCCTCTTCTCCTACAAATGCCAAGTGGACGAGACAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393400.6
ENST00000483868.5
3UTR-3UTR CCA 90 bp CACTTCAGTCCATCCACCATGGTGGATGCTTTGAGGAGGCCAAAGCACCATGGGCCTGGAAGGAAAGCCTaGGCCATGTCACTGAGCAGT +
Preference number: 2 (lower is better)
Translates to: HFSPSTMVDALRRPKHHGPGRKA*AMSLSS
Trigger: ACTGCTCAGTGACATGGCCCAGGCTTTCCTTCCAGG...CCCATGGTGCTTTGGCCTCCTCAAAGCATCCACCATGGTGGATGGACTGAAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000648957.1
3UTR-3UTR CCA 90 bp TCCATCCACCATGGTGGATGCTTTGAGGAGGCCAAAGCACCATGGGGATGGGATCCTGGAAGGAAAGCCTaGGCCATGTCACTGAGCAGT +
Preference number: 2 (lower is better)
Translates to: SIHHGGCFEEAKAPWGWDPGRKA*AMSLSS
Trigger: ACTGCTCAGTGACATGGCCCAGGCTTTCCTTCCAGG...ATCCCATCCCCATGGTGCTTTGGCCTCCTCAAAGCATCCACCATGGTGGATGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000648957.1
3UTR-3UTR CCA 90 bp TCCATCCACCATGGTGGATGCTTTGAGGAGGCCAAAGCACCATGGGGATGGGATCAGTGTGGCAGGGCATaGAAGCGATGTCATCCAGGT +
Preference number: 2 (lower is better)
Translates to: SIHHGGCFEEAKAPWGWDQCGRA*KRCHPG
Trigger: ACCTGGATGACATCGCTTCCATGCCCTGCCACACTG...ATCCCATCCCCATGGTGCTTTGGCCTCCTCAAAGCATCCACCATGGTGGATGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393400.6
3UTR-3UTR TCA 90 bp TGTGAACACAGGATGGCTCTGGAAGGTTATGGAGACCCTGGGTGCTTCAGGAGGCCACACCCATCCTTATaGCAAACATCAGTCCCCGAG +
Preference number: 2 (lower is better)
Translates to: CEHRMALEGYGDPGCFRRPHPSL*QTSVPE
Trigger: CTCGGGGACTGATGTTTGTCATAAGGATGGGTGTGG...CCTCCTGAAGCACCCAGGGTCTCCATAACCTTCCAGAGCCATCCTGTGTTCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355552.8
ENST00000648957.1
3UTR-3UTR GCA 90 bp CCTTACCCCGCTCACTCAGAATGCCGTGAGCTTGCCTTCCCTGATTACCAGGCTATCCACCATGGTGGATaGTTTGAGGAGGCCAAAGCA +
Preference number: 2 (lower is better)
Translates to: PYPAHSECRELAFPDYQAIHHGG*FEEAKA
Trigger: TGCTTTGGCCTCCTCAAAGCATCCACCATGGTGGAT...AGCCTGGTAATCAGGGAAGGCAAGCTCACGGCATTCTGAGTGAGCGGGGTAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355552.8
ENST00000648957.1
3UTR-3UTR CCA 90 bp CAGCAAACTTCGGCTGACACTGTGCCATCTTGGACTGCATGTGGATCTGATGGTTGGCTGTGTCCTGGATaGGCTCCTCCTCTCCAACTC +
Preference number: 2 (lower is better)
Translates to: QQTSADTVPSWTACGSDGWLCPG*APPLQL
Trigger: GAGTTGGAGAGGAGGAGCCCATCCAGGACACAGCCA...ACCATCAGATCCACATGCAGTCCAAGATGGCACAGTGTCAGCCGAAGTTTGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355552.8
ENST00000648957.1
3UTR-3UTR GCA 90 bp TGTGAACACAGGATGGCTCTGGAAGGTTATGGAGACCCTGGGTGCTTCAGGAGGATCCACCATGGTGGATaGTTTGAGGAGGCCAAAGCA +
Preference number: 2 (lower is better)
Translates to: CEHRMALEGYGDPGCFRRIHHGG*FEEAKA
Trigger: TGCTTTGGCCTCCTCAAAGCATCCACCATGGTGGAT...CCTCCTGAAGCACCCAGGGTCTCCATAACCTTCCAGAGCCATCCTGTGTTCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355552.8
ENST00000648957.1
3UTR-3UTR CCA 90 bp AAGAAAATATACACACTTCAGTCCATCCACCATGGTGGATGCTTTGAGGAGGCCGTCCTCCACAGGCCCTaGCAGCTGCCCTCAGGCATT +
Preference number: 2 (lower is better)
Translates to: KKIYTLQSIHHGGCFEEAVLHRP*QLPSGI
Trigger: AATGCCTGAGGGCAGCTGCCAGGGCCTGTGGAGGAC...GGCCTCCTCAAAGCATCCACCATGGTGGATGGACTGAAGTGTGTATATTTTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296210.11
ENST00000393400.6
3UTR-3UTR CCA 90 bp AAATATACACACTTCAGTCCATCCACCATGGTGGATGCTTTGAGGAGGCCAAAGGAACGTCCCTTGACCTaGTCCTCCTCCCCTGGGGAC +
Preference number: 2 (lower is better)
Translates to: KYTHFSPSTMVDALRRPKERPLT*SSSPGD
Trigger: GTCCCCAGGGGAGGAGGACCAGGTCAAGGGACGTTC...CTTTGGCCTCCTCAAAGCATCCACCATGGTGGATGGACTGAAGTGTGTATATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000648957.1
3UTR-3UTR TCA 90 bp AAAATATACACACTTCAGTCCATCCACCATGGTGGATGCTTTGAGGAGGCCAAACCACAGAACGTCCCTTaGCCTGGTCCTCCTCCCCTG +
Preference number: 2 (lower is better)
Translates to: KIYTLQSIHHGGCFEEAKPQNVP*PGPPPL
Trigger: CAGGGGAGGAGGACCAGGTCAAGGGACGTTCTGTGG...TTTGGCCTCCTCAAAGCATCCACCATGGTGGATGGACTGAAGTGTGTATATTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000648957.1
3UTR-3UTR TCA 90 bp AACTCCCTTTCACTCTGGCTGCCAAAAAGCTCAAAGCCGAACTCAGGTACAAGGACAACAGTGTGTGTCTaGCAAAGGGAGAGGGGCTGG +
Preference number: 2 (lower is better)
Translates to: NSLSLWLPKSSKPNSGTRTTVCV*QRERGW
Trigger: CCAGCCCCTCTCCCTTTGTCAGACACACACTGTTGT...CCTTGTACCTGAGTTCGGCTTTGAGCTTTTTGGCAGCCAGAGTGAAAGGGAGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355552.8
ENST00000648957.1
3UTR-3UTR CCA 90 bp ATCAAGAAAATATACACACTTCAGTCCATCCACCATGGTGGATGCTTTGAGGAGGGAGCCCCAGGGAGGTaGGGCCTCCAGACTCATGGT +
Preference number: 2 (lower is better)
Translates to: IKKIYTLQSIHHGGCFEEGAPGR*GLQTHG
Trigger: ACCATGAGTCTGGAGGCCCCACCTCCCTGGGGCTCC...CTCCTCAAAGCATCCACCATGGTGGATGGACTGAAGTGTGTATATTTTCTTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000648957.1
3UTR-3UTR CCA 90 bp AAATATACACACTTCAGTCCATCCACCATGGTGGATGCTTTGAGGAGGCCAAAGCAGTATGAGAGCAGGTaGGAAGGGGAGGAGGGTCCC +
Preference number: 2 (lower is better)
Translates to: KYTHFSPSTMVDALRRPKQYESR*EGEEGP
Trigger: GGGACCCTCCTCCCCTTCCCACCTGCTCTCATACTG...CTTTGGCCTCCTCAAAGCATCCACCATGGTGGATGGACTGAAGTGTGTATATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000648957.1
3UTR-3UTR GCA 90 bp AAATATACACACTTCAGTCCATCCACCATGGTGGATGCTTTGAGGAGGCCAAAGTGCAGAGAAGGAGGGTaGCCTCAGCCAACCTTGCCA +
Preference number: 2 (lower is better)
Translates to: KYTHFSPSTMVDALRRPKCREGG*PQPTLP
Trigger: TGGCAAGGTTGGCTGAGGGCACCCTCCTTCTCTGCA...CTTTGGCCTCCTCAAAGCATCCACCATGGTGGATGGACTGAAGTGTGTATATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000648957.1
3UTR-3UTR CCA 90 bp AAAATATACACACTTCAGTCCATCCACCATGGTGGATGCTTTGAGGAGGCCAAAGGGCCTCCAGACTCATaGTGGGAACAGGGCCACACA +
Preference number: 2 (lower is better)
Translates to: KIYTLQSIHHGGCFEEAKGPPDS*WEQGHT
Trigger: TGTGTGGCCCTGTTCCCACCATGAGTCTGGAGGCCC...TTTGGCCTCCTCAAAGCATCCACCATGGTGGATGGACTGAAGTGTGTATATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000648957.1
3UTR-3UTR CCA 90 bp GTGCTTTGCTCTGATTTACTCCCATTTTCAGCCAACCACACCCATCCTTATGACACCATGGGGATGGGATaGAGGCATTGGGAGAGCCAG +
Preference number: 2 (lower is better)
Translates to: VLCSDLLPFSANHTHPYDTMGMG*RHWESQ
Trigger: CTGGCTCTCCCAATGCCTCCATCCCATCCCCATGGT...GTCATAAGGATGGGTGTGGTTGGCTGAAAATGGGAGTAAATCAGAGCAAAGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355552.8
ENST00000648957.1
3UTR-3UTR CCA 90 bp GTGCTTTGCTCTGATTTACTCCCATTTTCAGCCAACCACACCCATCCTTATGACAGGGGCAGCGGCAGCTaGGATCCTGTTTCTCTTCAC +
Preference number: 2 (lower is better)
Translates to: VLCSDLLPFSANHTHPYDRGSGS*DPVSLH
Trigger: GTGAAGAGAAACAGGATCCCAGCTGCCGCTGCCCCT...GTCATAAGGATGGGTGTGGTTGGCTGAAAATGGGAGTAAATCAGAGCAAAGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355552.8
ENST00000648957.1
3UTR-3UTR TCA 90 bp ATCAAGAAAATATACACACTTCAGTCCATCCACCATGGTGGATGCTTTGAGGAGCGCTGTCTGTGCTGTTaGTGCTGCCAGTGTGGCAGG +
Preference number: 2 (lower is better)
Translates to: IKKIYTLQSIHHGGCFEERCLCC*CCQCGR
Trigger: CCTGCCACACTGGCAGCATCAACAGCACAGACAGCG...CTCCTCAAAGCATCCACCATGGTGGATGGACTGAAGTGTGTATATTTTCTTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296210.11
ENST00000393400.6
3UTR-3UTR GCA 90 bp AACTCCCTTTCACTCTGGCTGCCAAAAAGCTCAAAGCCGAACTCAGGTACAAGGTGGGGGCCTACTATGTaGCAAGCACTATTCTTGAGG +
Preference number: 2 (lower is better)
Translates to: NSLSLWLPKSSKPNSGTRWGPTM*QALFLR
Trigger: CCTCAAGAATAGTGCTTGGCACATAGTAGGCCCCCA...CCTTGTACCTGAGTTCGGCTTTGAGCTTTTTGGCAGCCAGAGTGAAAGGGAGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000355552.8
ENST00000648957.1
3UTR-3UTR CCA 90 bp AAATATACACACTTCAGTCCATCCACCATGGTGGATGCTTTGAGGAGGCCAAAGCAACCTTGCCAAGCATaGCCCTGGAAGGAAAGCCTG +
Preference number: 2 (lower is better)
Translates to: KYTHFSPSTMVDALRRPKQPCQA*PWKESL
Trigger: CAGGCTTTCCTTCCAGGGCCATGCTTGGCAAGGTTG...CTTTGGCCTCCTCAAAGCATCCACCATGGTGGATGGACTGAAGTGTGTATATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000648957.1
3UTR-3UTR CCA 90 bp AACTCCCTTTCACTCTGGCTGCCAAAAAGCTCAAAGCCGAACTCAGGTACAAGGCAAAGGGAGAGGGGCTaGCTCACAAAACATAGTTCT +
Preference number: 2 (lower is better)
Translates to: NSLSLWLPKSSKPNSGTRQRERG*LTKHSS
Trigger: AGAACTATGTTTTGTGAGCCAGCCCCTCTCCCTTTG...CCTTGTACCTGAGTTCGGCTTTGAGCTTTTTGGCAGCCAGAGTGAAAGGGAGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000355552.8
ENST00000648957.1
3UTR-3UTR CCA 90 bp AAAATATACACACTTCAGTCCATCCACCATGGTGGATGCTTTGAGGAGGCCAAAAGGAGAAGAGGATCTTaGGCTCCGAGCCGAAGAAGC +
Preference number: 2 (lower is better)
Translates to: KIYTLQSIHHGGCFEEAKRRRGS*APSRRS
Trigger: GCTTCTTCGGCTCGGAGCCCAAGATCCTCTTCTCCT...TTTGGCCTCCTCAAAGCATCCACCATGGTGGATGGACTGAAGTGTGTATATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393400.6
3UTR-3UTR CCA 90 bp CTATTCTTGAGGCTAAAAATAAGAGCTATCCTTATCGTTCATTACTGTACGCCAGATGGCAAAGGGGATTaGGAGCCCCAGGGAGGTGGG +
Preference number: 2 (lower is better)
Translates to: LFLRLKIRAILIVHYCTPDGKGD*EPQGGG
Trigger: CCCACCTCCCTGGGGCTCCCAATCCCCTTTGCCATC...TGGCGTACAGTAATGAACGATAAGGATAGCTCTTATTTTTAGCCTCAAGAATAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000355552.8
ENST00000648957.1
3UTR-3UTR CCA 90 bp ATCAAGAAAATATACACACTTCAGTCCATCCACCATGGTGGATGCTTTGAGGAGCAACCTTGCCAAGCATaGCCCTGGAAGGAAAGCCTG +
Preference number: 2 (lower is better)
Translates to: IKKIYTLQSIHHGGCFEEQPCQA*PWKESL
Trigger: CAGGCTTTCCTTCCAGGGCCATGCTTGGCAAGGTTG...CTCCTCAAAGCATCCACCATGGTGGATGGACTGAAGTGTGTATATTTTCTTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000648957.1
3UTR-3UTR CCA 90 bp CTATTCTTGAGGCTAAAAATAAGAGCTATCCTTATCGTTCATTACTGTACGCCACTGGGGACTGCTCCTTaGTTGAGCAGAGGCCCCCTG +
Preference number: 2 (lower is better)
Translates to: LFLRLKIRAILIVHYCTPLGTAP*LSRGPL
Trigger: CAGGGGGCCTCTGCTCAACCAAGGAGCAGTCCCCAG...TGGCGTACAGTAATGAACGATAAGGATAGCTCTTATTTTTAGCCTCAAGAATAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000355552.8
ENST00000648957.1
3UTR-3UTR TCA 90 bp CTATTCTTGAGGCTAAAAATAAGAGCTATCCTTATCGTTCATTACTGTACGCCAACAACAGTGTGTGTCTaGCAAAGGGAGAGGGGCTGG +
Preference number: 2 (lower is better)
Translates to: LFLRLKIRAILIVHYCTPTTVCV*QRERGW
Trigger: CCAGCCCCTCTCCCTTTGTCAGACACACACTGTTGT...TGGCGTACAGTAATGAACGATAAGGATAGCTCTTATTTTTAGCCTCAAGAATAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355552.8
ENST00000648957.1
3UTR GCA 72 bp CCAGGTAGGCCACCCCGCCGGCAGAGTCGAACTGCGTaGTCGAGTAGCTGGCAGCTGAGGCCCCAGCAGCCC +
Preference number: 3 (lower is better)
Translates to: PGRPPRRQSRTA*SSSWQLRPQQP
Trigger: GGGCTGCTGGGGCCTCAGCTGCCAGCTACTCGAGCACGCAGTTCGACTCTGCCGGCGGGGTGGCCTACCTGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393400.6
ENST00000483868.5
3UTR-3UTR CAA 90 bp GGGAGAGCCAGCCCTGCCCTCGTGCCAAGGGTGCAGAGAAGGAGGGTGCCCTCAAGATGGCAAAGGGGATaGGGAGCCCCAGGGAGGTGG +
Preference number: 3 (lower is better)
Translates to: GRASPALVPRVQRRRVPSRWQRG*GAPGRW
Trigger: CCACCTCCCTGGGGCTCCCAATCCCCTTTGCCATCT...TGAGGGCACCCTCCTTCTCTGCACCCTTGGCACGAGGGCAGGGCTGGCTCTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000483868.5
ENST00000489960.5
ENST00000648957.1
3UTR GCA 72 bp GCCCTGCCCTCGTGCCAAGGGTGCAGAGAAGGAGGGTaGCCTCAGCCAACCTTGCCAAGCATGGCCCTGGAA +
Preference number: 3 (lower is better)
Translates to: ALPSCQGCREGG*PQPTLPSMALE
Trigger: TTCCAGGGCCATGCTTGGCAAGGTTGGCTGAGGGCACCCTCCTTCTCTGCACCCTTGGCACGAGGGCAGGGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000483868.5
ENST00000489960.5
ENST00000648957.1
3UTR GCA 72 bp GCATTGGGAGAGCCAGCCCTGCCCTCGTGCCAAGGGTaGAGAGAAGGAGGGTGCCCTCAGCCAACCTTGCCA +
Preference number: 3 (lower is better)
Translates to: ALGEPALPSCQG*REGGCPQPTLP
Trigger: TGGCAAGGTTGGCTGAGGGCACCCTCCTTCTCTGCACCCTTGGCACGAGGGCAGGGCTGGCTCTCCCAATGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000483868.5
ENST00000489960.5
ENST00000648957.1
3UTR CCA 72 bp CTGCAGCCCAGGAGTCCAGCTCACTGGCCGTACTGTTaGCCCTGTCCGCTATCAACCCTCCAGGCCCTCCCA +
Preference number: 3 (lower is better)
Translates to: LQPRSPAHWPYC*PCPLSTLQALP
Trigger: TGGGAGGGCCTGGAGGGTTGATAGCGGACAGGGCCAACAGTACGGCCAGTGAGCTGGACTCCTGGGCTGCAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355552.8
ENST00000648957.1
3UTR-3UTR CAA 90 bp CCACACAGGGCTACTGCCCACAGAACGTCCCTTGACCTGGTCCTCCTCCCCTGGAGCTGCCCTCAGGCATaGATGGCCTTCCAGCGCTCG +
Preference number: 3 (lower is better)
Translates to: PHRATAHRTSLDLVLLPWSCPQA*MAFQRS
Trigger: CGAGCGCTGGAAGGCCATCAATGCCTGAGGGCAGCT...CCAGGGGAGGAGGACCAGGTCAAGGGACGTTCTGTGGGCAGTAGCCCTGTGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296210.11
ENST00000393400.6
ENST00000483868.5
3UTR CCA 72 bp CAGAGATGGCAAAGGGGATTGGGAGCCCCAGGGAGGTaGGGCCTCCAGACTCATGGTGGGAACAGGGCCACA +
Preference number: 3 (lower is better)
Translates to: QRWQRGLGAPGR*GLQTHGGNRAT
Trigger: TGTGGCCCTGTTCCCACCATGAGTCTGGAGGCCCCACCTCCCTGGGGCTCCCAATCCCCTTTGCCATCTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000483868.5
ENST00000489960.5
ENST00000648957.1
3UTR TCA 72 bp CCTCCCAGGGAGCCTGACACATTGGCCCCACAGACATaGGCTGTGTTGGAGCTTGTGCCCTCGGCACCCCAT +
Preference number: 3 (lower is better)
Translates to: PPREPDTLAPQT*AVLELVPSAPH
Trigger: ATGGGGTGCCGAGGGCACAAGCTCCAACACAGCTCATGTCTGTGGGGCCAATGTGTCAGGCTCCCTGGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355552.8
ENST00000648957.1
3UTR-3UTR CAA 90 bp AGCTGCCCTCAGGCATTGATGGCCTTCCAGCGCTCGCTGTCTGTGCTGTTGATGAGCTGCCCTCAGGCATaGATGGCCTTCCAGCGCTCG +
Preference number: 3 (lower is better)
Translates to: SCPQALMAFQRSLSVLLMSCPQA*MAFQRS
Trigger: CGAGCGCTGGAAGGCCATCAATGCCTGAGGGCAGCT...CATCAACAGCACAGACAGCGAGCGCTGGAAGGCCATCAATGCCTGAGGGCAGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296210.11
ENST00000393400.6
ENST00000483868.5
3UTR-3UTR CAA 90 bp CCTTACCCCGCTCACTCAGAATGCCGTGAGCTTGCCTTCCCTGATTACCAGGCTGGGACTGCTCCTTGGTaGAGCAGAGGCCCCCTGAGC +
Preference number: 3 (lower is better)
Translates to: PYPAHSECRELAFPDYQAGTAPW*SRGPLS
Trigger: GCTCAGGGGGCCTCTGCTCAACCAAGGAGCAGTCCC...AGCCTGGTAATCAGGGAAGGCAAGCTCACGGCATTCTGAGTGAGCGGGGTAAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355552.8
ENST00000648957.1
3UTR-3UTR CAA 90 bp CGGCAGAGTCGAACTGCGTGCTCGAGTAGCTGGCAGCTGAGGCCCCAGCAGCCCCTCTGTCTCGTCCACTaGGCATTTGTAGGAGAAGAG +
Preference number: 3 (lower is better)
Translates to: RQSRTACSSSWQLRPQQPLCLVH*AFVGEE
Trigger: CTCTTCTCCTACAAATGCCAAGTGGACGAGACAGAG...GGGCTGCTGGGGCCTCAGCTGCCAGCTACTCGAGCACGCAGTTCGACTCTGCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393400.6
ENST00000483868.5
3UTR TCA 72 bp GTCCGCTATCAACCCTCCAGGCCCTCCCAGGGAGCCTaGCACATTGGCCCCACAGACATGAGCTGTGTTGGA +
Preference number: 3 (lower is better)
Translates to: VRYQPSRPSQGA*HIGPTDMSCVG
Trigger: TCCAACACAGCTCATGTCTGTGGGGCCAATGTGTCAGGCTCCCTGGGAGGGCCTGGAGGGTTGATAGCGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355552.8
ENST00000648957.1
3UTR CCA 72 bp GAGAAGGAGGGTGCCCTCAGCCAACCTTGCCAAGCATaGCCCTGGAAGGAAAGCCTGGGCCATGTCACTGAG +
Preference number: 3 (lower is better)
Translates to: EKEGALSQPCQA*PWKESLGHVTE
Trigger: CTCAGTGACATGGCCCAGGCTTTCCTTCCAGGGCCATGCTTGGCAAGGTTGGCTGAGGGCACCCTCCTTCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000483868.5
ENST00000489960.5
ENST00000648957.1
3UTR-3UTR CAA 90 bp AGCCTGGGCCATGTCACTGAGCAGTATGAGAGCAGGTGGGAAGGGGAGGAGGGTTCGCTGTCTGTGCTGTaGATGCTGCCAGTGTGGCAG +
Preference number: 3 (lower is better)
Translates to: SLGHVTEQYESRWEGEEGSLSVL*MLPVWQ
Trigger: CTGCCACACTGGCAGCATCAACAGCACAGACAGCGA...ACCCTCCTCCCCTTCCCACCTGCTCTCATACTGCTCAGTGACATGGCCCAGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296210.11
ENST00000393400.6
ENST00000483868.5
3UTR-3UTR CAA 90 bp AGTCCATCCACCATGGTGGATGCTTTGAGGAGGCCAAAGCACCATGGGGATGGGAGATGGCAAAGGGGATaGGGAGCCCCAGGGAGGTGG +
Preference number: 3 (lower is better)
Translates to: SPSTMVDALRRPKHHGDGRWQRG*GAPGRW
Trigger: CCACCTCCCTGGGGCTCCCAATCCCCTTTGCCATCT...CCCATCCCCATGGTGCTTTGGCCTCCTCAAAGCATCCACCATGGTGGATGGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000648957.1
3UTR-3UTR CAA 90 bp CCAACCCTTACCCCGCTCACTCAGAATGCCGTGAGCTTGCCTTCCCTGATTACCACTGGGGACTGCTCCTaGGTTGAGCAGAGGCCCCCT +
Preference number: 3 (lower is better)
Translates to: PTLTPLTQNAVSLPSLITTGDCS*VEQRPP
Trigger: AGGGGGCCTCTGCTCAACCAAGGAGCAGTCCCCAGT...GGTAATCAGGGAAGGCAAGCTCACGGCATTCTGAGTGAGCGGGGTAAGGGTTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000355552.8
ENST00000648957.1
3UTR GCA 72 bp AAAGTATGCCATTCAGGGGCACCCTGCAGTACCCCCTaGAGCCCAGGAGTCCAGCTCACTGGCCGTACTGTT +
Preference number: 3 (lower is better)
Translates to: KVCHSGAPCSTP*SPGVQLTGRTV
Trigger: AACAGTACGGCCAGTGAGCTGGACTCCTGGGCTGCAGGGGGTACTGCAGGGTGCCCCTGAATGGCATACTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355552.8
ENST00000648957.1
3UTR-3UTR CAA 90 bp CTGGATGGGCTCCTCCTCTCCAACTCTGGGGATTACATAACTGGCAGCAACTCCACTGGGGACTGCTCCTaGGTTGAGCAGAGGCCCCCT +
Preference number: 3 (lower is better)
Translates to: LDGLLLSNSGDYITGSNSTGDCS*VEQRPP
Trigger: AGGGGGCCTCTGCTCAACCAAGGAGCAGTCCCCAGT...GGAGTTGCTGCCAGTTATGTAATCCCCAGAGTTGGAGAGGAGGAGCCCATCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000355552.8
ENST00000648957.1
3UTR-3UTR CAA 90 bp GGCCACACAGGGCTACTGCCCACAGAACGTCCCTTGACCTGGTCCTCCTCCCCTCTCTGTCTCGTCCACTaGGCATTTGTAGGAGAAGAG +
Preference number: 3 (lower is better)
Translates to: GHTGLLPTERPLTWSSSPLCLVH*AFVGEE
Trigger: CTCTTCTCCTACAAATGCCAAGTGGACGAGACAGAG...AGGGGAGGAGGACCAGGTCAAGGGACGTTCTGTGGGCAGTAGCCCTGTGTGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393400.6
ENST00000483868.5
3UTR-3UTR CAA 90 bp CAGCAAACTTCGGCTGACACTGTGCCATCTTGGACTGCATGTGGATCTGATGGTGGGACTGCTCCTTGGTaGAGCAGAGGCCCCCTGAGC +
Preference number: 3 (lower is better)
Translates to: QQTSADTVPSWTACGSDGGTAPW*SRGPLS
Trigger: GCTCAGGGGGCCTCTGCTCAACCAAGGAGCAGTCCC...ACCATCAGATCCACATGCAGTCCAAGATGGCACAGTGTCAGCCGAAGTTTGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355552.8
ENST00000648957.1
3UTR GCA 72 bp CACAGGATGGCTCTGGAAGGTTATGGAGACCCTGGGTaGTTCAGGAGGGGGACAGAGGAATTCAGTGCCACA +
Preference number: 3 (lower is better)
Translates to: HRMALEGYGDPG*FRRGTEEFSAT
Trigger: TGTGGCACTGAATTCCTCTGTCCCCCTCCTGAAGCACCCAGGGTCTCCATAACCTTCCAGAGCCATCCTGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355552.8
ENST00000648957.1
3UTR GCA 72 bp CCCTGGGTGCTTCAGGAGGGGGACAGAGGAATTCAGTaGCACACAGGGAGATTTATCGTTCACCAAATACCC +
Preference number: 3 (lower is better)
Translates to: PWVLQEGDRGIQ*HTGRFIVHQIP
Trigger: GGGTATTTGGTGAACGATAAATCTCCCTGTGTGGCACTGAATTCCTCTGTCCCCCTCCTGAAGCACCCAGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355552.8
ENST00000648957.1
3UTR CCA 72 bp TGGCTGTGTCCTGGATGGGCTCCTCCTCTCCAACTCTaGGGATTACATAACTGGCAGCAACTCCCTTTCACT +
Preference number: 3 (lower is better)
Translates to: WLCPGWAPPLQL*GLHNWQQLPFT
Trigger: AGTGAAAGGGAGTTGCTGCCAGTTATGTAATCCCCAGAGTTGGAGAGGAGGAGCCCATCCAGGACACAGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355552.8
ENST00000648957.1
3UTR-3UTR CAA 90 bp AAGAAAATATACACACTTCAGTCCATCCACCATGGTGGATGCTTTGAGGAGGCCCCCACAGAACGTCCCTaGACCTGGTCCTCCTCCCCT +
Preference number: 3 (lower is better)
Translates to: KKIYTLQSIHHGGCFEEAPTERP*TWSSSP
Trigger: AGGGGAGGAGGACCAGGTCAAGGGACGTTCTGTGGG...GGCCTCCTCAAAGCATCCACCATGGTGGATGGACTGAAGTGTGTATATTTTCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000648957.1
3UTR-3UTR CAA 90 bp AAGAAAATATACACACTTCAGTCCATCCACCATGGTGGATGCTTTGAGGAGGCCAGATGGCAAAGGGGATaGGGAGCCCCAGGGAGGTGG +
Preference number: 3 (lower is better)
Translates to: KKIYTLQSIHHGGCFEEARWQRG*GAPGRW
Trigger: CCACCTCCCTGGGGCTCCCAATCCCCTTTGCCATCT...GGCCTCCTCAAAGCATCCACCATGGTGGATGGACTGAAGTGTGTATATTTTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000648957.1
3UTR TCA 72 bp AGAGAGAACCGGCTGCCCAAGACAACAGTGTGTGTCTaGCAAAGGGAGAGGGGCTGGCTCACAAAACATAGT +
Preference number: 3 (lower is better)
Translates to: RENRLPKTTVCV*QRERGWLTKHS
Trigger: ACTATGTTTTGTGAGCCAGCCCCTCTCCCTTTGTCAGACACACACTGTTGTCTTGGGCAGCCGGTTCTCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355552.8
ENST00000648957.1
3UTR CCA 72 bp ATATACACATCCGTTGGTGTGAACACAGGATGGCTCTaGAAGGTTATGGAGACCCTGGGTGCTTCAGGAGGG +
Preference number: 3 (lower is better)
Translates to: IYTSVGVNTGWL*KVMETLGASGG
Trigger: CCCTCCTGAAGCACCCAGGGTCTCCATAACCTTCCAGAGCCATCCTGTGTTCACACCAACGGATGTGTATAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355552.8
ENST00000648957.1
3UTR TCA 72 bp TTTACTCCCATTTTCAGCCAACCACACCCATCCTTATaGCAAACATCAGTCCCCGAGTCCTGTCTGCTGGGG +
Preference number: 3 (lower is better)
Translates to: FTPIFSQPHPSL*QTSVPESCLLG
Trigger: CCCCAGCAGACAGGACTCGGGGACTGATGTTTGTCATAAGGATGGGTGTGGTTGGCTGAAAATGGGAGTAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355552.8
ENST00000648957.1
3UTR GCA 72 bp CCTCAGGCTCCTGAAAGGAACCAGCCCCAGTATTCCTaGAAAACCTCCACATTAGCACCTTCTGCTCCTTTT +
Preference number: 3 (lower is better)
Translates to: PQAPERNQPQYS*KTSTLAPSAPF
Trigger: AAAAGGAGCAGAAGGTGCTAATGTGGAGGTTTTGCAGGAATACTGGGGCTGGTTCCTTTCAGGAGCCTGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355552.8
ENST00000648957.1
3UTR TCA 72 bp CCCCTACTCATGCCTTATGATCCCAGTGCTTTGCTCTaGTTTACTCCCATTTTCAGCCAACCACACCCATCC +
Preference number: 3 (lower is better)
Translates to: PLLMPYDPSALL*FTPIFSQPHPS
Trigger: GGATGGGTGTGGTTGGCTGAAAATGGGAGTAAATCAGAGCAAAGCACTGGGATCATAAGGCATGAGTAGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355552.8
ENST00000648957.1
3UTR GCA 72 bp CCTCTCCCCTACTCATGCCTTATGATCCCAGTGCTTTaGTCTGATTTACTCCCATTTTCAGCCAACCACACC +
Preference number: 3 (lower is better)
Translates to: PLPYSCLMIPVL*SDLLPFSANHT
Trigger: GGTGTGGTTGGCTGAAAATGGGAGTAAATCAGAGCAAAGCACTGGGATCATAAGGCATGAGTAGGGGAGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355552.8
ENST00000648957.1
3UTR GCA 72 bp TCATTCACTGCAGCCAGCAAACTTCGGCTGACACTGTaGCATCTTGGACTGCATGTGGATCTGATGGTCAAA +
Preference number: 3 (lower is better)
Translates to: SFTAASKLRLTL*HLGLHVDLMVK
Trigger: TTTGACCATCAGATCCACATGCAGTCCAAGATGGCACAGTGTCAGCCGAAGTTTGCTGGCTGCAGTGAATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355552.8
ENST00000648957.1
3UTR GCA 72 bp AAAATATACACACTTCAGTCCATCCACCATGGTGGATaGTTTGAGGAGGCCAAAGCACCATGGGGATGGGAT +
Preference number: 3 (lower is better)
Translates to: KIYTLQSIHHGG*FEEAKAPWGWD
Trigger: ATCCCATCCCCATGGTGCTTTGGCCTCCTCAAAGCATCCACCATGGTGGATGGACTGAAGTGTGTATATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000648957.1
3UTR-3UTR CAA 90 bp CCAATGGAGAAAAACAACATATATTGGAGGACAACTATTGATCTCTGCAGAAGACCCACAGAACGTCCCTaGACCTGGTCCTCCTCCCCT +
Preference number: 3 (lower is better)
Translates to: PMEKNNIYWRTTIDLCRRPTERP*TWSSSP
Trigger: AGGGGAGGAGGACCAGGTCAAGGGACGTTCTGTGGG...TCTTCTGCAGAGATCAATAGTTGTCCTCCAATATATGTTGTTTTTCTCCATTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355552.8
ENST00000648957.1
3UTR GCA 72 bp CTCCGCATTTTACAGATGGCAATAGTAAGTCCATTCTaGGTTTTAATGGAGCTGAGCAGAGAGAACCGGCTG +
Preference number: 3 (lower is better)
Translates to: LRILQMAIVSPF*VLMELSRENRL
Trigger: CAGCCGGTTCTCTCTGCTCAGCTCCATTAAAACGCAGAATGGACTTACTATTGCCATCTGTAAAATGCGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355552.8
ENST00000648957.1
3UTR-3UTR CAA 90 bp CCAATGGAGAAAAACAACATATATTGGAGGACAACTATTGATCTCTGCAGAAGAGAAGCAGTCCTCCACTaGACATGGAATGATCTCCAA +
Preference number: 3 (lower is better)
Translates to: PMEKNNIYWRTTIDLCRREAVLH*TWNDLQ
Trigger: TTGGAGATCATTCCATGTCAAGTGGAGGACTGCTTC...TCTTCTGCAGAGATCAATAGTTGTCCTCCAATATATGTTGTTTTTCTCCATTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355552.8
ENST00000648957.1
CDS-3UTR CCA 90 bp AGGCCACCCCGCCGGCAGAGTCGAACTGCGTGCTCGAGTAGCTGGCAGCTGAGGCCAGACCAGGCGGCCTaGGCCGGGAAGCGTCGCGCA +
Preference number: 4 (lower is better)
Translates to: RPPRRQSRTACSSSWQLRPDQAA*AGKRRA
Trigger: TGCGCGACGCTTCCCGGCCCAGGCCGCCTGGTCTGG...CCTCAGCTGCCAGCTACTCGAGCACGCAGTTCGACTCTGCCGGCGGGGTGGCCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393400.6
ENST00000483868.5
CDS-3UTR TCA 90 bp GTGGGAACAGGGCCACACAGGGCTACTGCCCACAGAACGTCCCTTGACCTGGTCGCCAGCAGCCAGCCCTaGCAGCCCGGGCCGCGCTCA +
Preference number: 4 (lower is better)
Translates to: VGTGPHRATAHRTSLDLVASSQP*QPGPRS
Trigger: TGAGCGCGGCCCGGGCTGTCAGGGCTGGCTGCTGGC...GACCAGGTCAAGGGACGTTCTGTGGGCAGTAGCCCTGTGTGGCCCTGTTCCCAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000483868.5
ENST00000489960.5
CDS-3UTR GCA 90 bp GATTGGGAGCCCCAGGGAGGTGGGGCCTCCAGACTCATGGTGGGAACAGGGCCACGCCGCCACTGGGTGTaGGCGGATCCAGCACAGGCC +
Preference number: 4 (lower is better)
Translates to: DWEPQGGGASRLMVGTGPRRHWV*ADPAQA
Trigger: GGCCTGTGCTGGATCCGCGCACACCCAGTGGCGGCG...TGGCCCTGTTCCCACCATGAGTCTGGAGGCCCCACCTCCCTGGGGCTCCCAATC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000483868.5
ENST00000489960.5
CDS-3UTR GCA 90 bp GGAGCCCCAGGGAGGTGGGGCCTCCAGACTCATGGTGGGAACAGGGCCACACAGCCACGGCCCGGGCAATaGCCACCAGCGCCACCACAA +
Preference number: 4 (lower is better)
Translates to: GAPGRWGLQTHGGNRATQPRPGQ*PPAPPQ
Trigger: TTGTGGTGGCGCTGGTGGGCATTGCCCGGGCCGTGG...CTGTGTGGCCCTGTTCCCACCATGAGTCTGGAGGCCCCACCTCCCTGGGGCTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000483868.5
ENST00000489960.5
ENST00000648957.1
CDS-3UTR CCA 90 bp GGAGCCCCAGGGAGGTGGGGCCTCCAGACTCATGGTGGGAACAGGGCCACACAGCCCATCCGCCGCCACTaGGTGTGCGCGGATCCAGCA +
Preference number: 4 (lower is better)
Translates to: GAPGRWGLQTHGGNRATQPIRRH*VCADPA
Trigger: TGCTGGATCCGCGCACACCCAGTGGCGGCGGATGGG...CTGTGTGGCCCTGTTCCCACCATGAGTCTGGAGGCCCCACCTCCCTGGGGCTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000483868.5
ENST00000489960.5
CDS-3UTR TCA 90 bp GGGAGAGCCAGCCCTGCCCTCGTGCCAAGGGTGCAGAGAAGGAGGGTGCCCTCACCAGGGTCCCCTGGGTaGCAGAGTAGGCCAGGGACA +
Preference number: 4 (lower is better)
Translates to: GRASPALVPRVQRRRVPSPGSPG*QSRPGT
Trigger: TGTCCCTGGCCTACTCTGTCACCCAGGGGACCCTGG...TGAGGGCACCCTCCTTCTCTGCACCCTTGGCACGAGGGCAGGGCTGGCTCTCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000483868.5
ENST00000489960.5
ENST00000648957.1
CDS-3UTR TCA 90 bp CGGCAGAGTCGAACTGCGTGCTCGAGTAGCTGGCAGCTGAGGCCCCAGCAGCCCGCTGCCCTCAGGCATTaGTGGCCTTCCAGCGCTCGC +
Preference number: 4 (lower is better)
Translates to: RQSRTACSSSWQLRPQQPAALRH*WPSSAR
Trigger: GCGAGCGCTGGAAGGCCATCAATGCCTGAGGGCAGC...GGGCTGCTGGGGCCTCAGCTGCCAGCTACTCGAGCACGCAGTTCGACTCTGCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393400.6
ENST00000483868.5
CDS-3UTR TCA 90 bp GGAGCCCCAGGGAGGTGGGGCCTCCAGACTCATGGTGGGAACAGGGCCACACAGGCTGCCCTCAGGCATTaGTGGCCTTCCAGCGCTCGC +
Preference number: 4 (lower is better)
Translates to: GAPGRWGLQTHGGNRATQAALRH*WPSSAR
Trigger: GCGAGCGCTGGAAGGCCATCAATGCCTGAGGGCAGC...CTGTGTGGCCCTGTTCCCACCATGAGTCTGGAGGCCCCACCTCCCTGGGGCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000483868.5
ENST00000489960.5
ENST00000648957.1
CDS-3UTR TCA 90 bp CCACACAGGGCTACTGCCCACAGAACGTCCCTTGACCTGGTCCTCCTCCCCTGGCCAGCCCTGGGGGAGTaGGAGCCGCCCAGTGAGCTG +
Preference number: 4 (lower is better)
Translates to: PHRATAHRTSLDLVLLPWPALGE*EPPSEL
Trigger: CAGCTCACTGGGCGGCTCTCACTCCCCCAGGGCTGG...CCAGGGGAGGAGGACCAGGTCAAGGGACGTTCTGTGGGCAGTAGCCCTGTGTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000450633.6
CDS-3UTR GCA 90 bp CCACACAGGGCTACTGCCCACAGAACGTCCCTTGACCTGGTCCTCCTCCCCTGGCGCCGCCACTGGGTGTaGGCGGATCCAGCACAGGCC +
Preference number: 4 (lower is better)
Translates to: PHRATAHRTSLDLVLLPWRRHWV*ADPAQA
Trigger: GGCCTGTGCTGGATCCGCGCACACCCAGTGGCGGCG...CCAGGGGAGGAGGACCAGGTCAAGGGACGTTCTGTGGGCAGTAGCCCTGTGTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000483868.5
ENST00000489960.5
CDS-3UTR CCA 90 bp AGGCCACCCCGCCGGCAGAGTCGAACTGCGTGCTCGAGTAGCTGGCAGCTGAGGGGAGCCCCAGGGAGGTaGGGCCTCCAGACTCATGGT +
Preference number: 4 (lower is better)
Translates to: RPPRRQSRTACSSSWQLRGAPGR*GLQTHG
Trigger: ACCATGAGTCTGGAGGCCCCACCTCCCTGGGGCTCC...CCTCAGCTGCCAGCTACTCGAGCACGCAGTTCGACTCTGCCGGCGGGGTGGCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000393400.6
ENST00000483868.5
CDS-3UTR CCA 90 bp GGGATTGGGAGCCCCAGGGAGGTGGGGCCTCCAGACTCATGGTGGGAACAGGGCAGCCAGCCCAGGGCTTaGGCACTGGGGACTGCTCCT +
Preference number: 4 (lower is better)
Translates to: GIGSPREVGPPDSWWEQGSQPRA*ALGTAP
Trigger: AGGAGCAGTCCCCAGTGCCCAAGCCCTGGGCTGGCT...GCCCTGTTCCCACCATGAGTCTGGAGGCCCCACCTCCCTGGGGCTCCCAATCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355552.8
ENST00000648957.1
CDS-3UTR CCA 90 bp GGGATTGGGAGCCCCAGGGAGGTGGGGCCTCCAGACTCATGGTGGGAACAGGGCGGCAGCAGTTGTCAGTaGACCAGCTGGCGGCAGCCG +
Preference number: 4 (lower is better)
Translates to: GIGSPREVGPPDSWWEQGGSSCQ*TSWRQP
Trigger: CGGCTGCCGCCAGCTGGTCCACTGACAACTGCTGCC...GCCCTGTTCCCACCATGAGTCTGGAGGCCCCACCTCCCTGGGGCTCCCAATCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489960.5
CDS-3UTR TCA 90 bp GATTGGGAGCCCCAGGGAGGTGGGGCCTCCAGACTCATGGTGGGAACAGGGCCAGCTGCCCTCAGGCATTaGTGGCCTTCCAGCGCTCGC +
Preference number: 4 (lower is better)
Translates to: DWEPQGGGASRLMVGTGPAALRH*WPSSAR
Trigger: GCGAGCGCTGGAAGGCCATCAATGCCTGAGGGCAGC...TGGCCCTGTTCCCACCATGAGTCTGGAGGCCCCACCTCCCTGGGGCTCCCAATC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000483868.5
ENST00000489960.5
ENST00000648957.1
CDS-3UTR TCA 90 bp GGAGCCCCAGGGAGGTGGGGCCTCCAGACTCATGGTGGGAACAGGGCCACACAGCCACAGAACGTCCCTTaGCCTGGTCCTCCTCCCCTG +
Preference number: 4 (lower is better)
Translates to: GAPGRWGLQTHGGNRATQPQNVP*PGPPPL
Trigger: CAGGGGAGGAGGACCAGGTCAAGGGACGTTCTGTGG...CTGTGTGGCCCTGTTCCCACCATGAGTCTGGAGGCCCCACCTCCCTGGGGCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000483868.5
ENST00000489960.5
ENST00000648957.1
CDS-3UTR GCA 90 bp GGGAGAGCCAGCCCTGCCCTCGTGCCAAGGGTGCAGAGAAGGAGGGTGCCCTCACCCTCGTGCCAAGGGTaGAGAGAAGGAGGGTGCCCT +
Preference number: 4 (lower is better)
Translates to: GRASPALVPRVQRRRVPSPSCQG*REGGCP
Trigger: AGGGCACCCTCCTTCTCTGCACCCTTGGCACGAGGG...TGAGGGCACCCTCCTTCTCTGCACCCTTGGCACGAGGGCAGGGCTGGCTCTCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000483868.5
ENST00000489960.5
ENST00000648957.1
CDS-3UTR GCA 90 bp GGAGCCCCAGGGAGGTGGGGCCTCCAGACTCATGGTGGGAACAGGGCCACACAGCCAGCCCTGCCCTCGTaGCAAGGGTGCAGAGAAGGA +
Preference number: 4 (lower is better)
Translates to: GAPGRWGLQTHGGNRATQPALPS*QGCREG
Trigger: TCCTTCTCTGCACCCTTGGCACGAGGGCAGGGCTGG...CTGTGTGGCCCTGTTCCCACCATGAGTCTGGAGGCCCCACCTCCCTGGGGCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000483868.5
ENST00000489960.5
ENST00000648957.1
CDS-3UTR CCA 90 bp GACTCATGGTGGGAACAGGGCCACACAGGGCTACTGCCCACAGAACGTCCCTTGCCAGACCAGGCGGCCTaGGCCGGGAAGCGTCGCGCA +
Preference number: 4 (lower is better)
Translates to: DSWWEQGHTGLLPTERPLPDQAA*AGKRRA
Trigger: TGCGCGACGCTTCCCGGCCCAGGCCGCCTGGTCTGG...CAAGGGACGTTCTGTGGGCAGTAGCCCTGTGTGGCCCTGTTCCCACCATGAGTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000483868.5
ENST00000489960.5
CDS-3UTR CCA 90 bp CTCCAGACTCATGGTGGGAACAGGGCCACACAGGGCTACTGCCCACAGAACGTCCCAGACCAGGCGGCCTaGGCCGGGAAGCGTCGCGCA +
Preference number: 4 (lower is better)
Translates to: LQTHGGNRATQGYCPQNVPDQAA*AGKRRA
Trigger: TGCGCGACGCTTCCCGGCCCAGGCCGCCTGGTCTGG...GACGTTCTGTGGGCAGTAGCCCTGTGTGGCCCTGTTCCCACCATGAGTCTGGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000483868.5
ENST00000489960.5
CDS-3UTR CCA 90 bp GGCCACACAGGGCTACTGCCCACAGAACGTCCCTTGACCTGGTCCTCCTCCCCTCCCATCCGCCGCCACTaGGTGTGCGCGGATCCAGCA +
Preference number: 4 (lower is better)
Translates to: GHTGLLPTERPLTWSSSPPIRRH*VCADPA
Trigger: TGCTGGATCCGCGCACACCCAGTGGCGGCGGATGGG...AGGGGAGGAGGACCAGGTCAAGGGACGTTCTGTGGGCAGTAGCCCTGTGTGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000483868.5
ENST00000489960.5
CDS-3UTR CCA 90 bp GGGATTGGGAGCCCCAGGGAGGTGGGGCCTCCAGACTCATGGTGGGAACAGGGCGTCCTCCACAGGCCCTaGCAGCTGCCCTCAGGCATT +
Preference number: 4 (lower is better)
Translates to: GIGSPREVGPPDSWWEQGVLHRP*QLPSGI
Trigger: AATGCCTGAGGGCAGCTGCCAGGGCCTGTGGAGGAC...GCCCTGTTCCCACCATGAGTCTGGAGGCCCCACCTCCCTGGGGCTCCCAATCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000483868.5
ENST00000489960.5
ENST00000648957.1
CDS-3UTR CCA 90 bp GGAGCCCCAGGGAGGTGGGGCCTCCAGACTCATGGTGGGAACAGGGCCACACAGGAACGTCCCTTGACCTaGTCCTCCTCCCCTGGGGAC +
Preference number: 4 (lower is better)
Translates to: GAPGRWGLQTHGGNRATQERPLT*SSSPGD
Trigger: GTCCCCAGGGGAGGAGGACCAGGTCAAGGGACGTTC...CTGTGTGGCCCTGTTCCCACCATGAGTCTGGAGGCCCCACCTCCCTGGGGCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000483868.5
ENST00000489960.5
ENST00000648957.1
CDS-3UTR CCA 90 bp GGGATTGGGAGCCCCAGGGAGGTGGGGCCTCCAGACTCATGGTGGGAACAGGGCGAACGTCCCTTGACCTaGTCCTCCTCCCCTGGGGAC +
Preference number: 4 (lower is better)
Translates to: GIGSPREVGPPDSWWEQGERPLT*SSSPGD
Trigger: GTCCCCAGGGGAGGAGGACCAGGTCAAGGGACGTTC...GCCCTGTTCCCACCATGAGTCTGGAGGCCCCACCTCCCTGGGGCTCCCAATCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000483868.5
ENST00000489960.5
ENST00000648957.1
CDS-3UTR CCA 90 bp GGGAGAGCCAGCCCTGCCCTCGTGCCAAGGGTGCAGAGAAGGAGGGTGCCCTCAGATGGCAAAGGGGATTaGGAGCCCCAGGGAGGTGGG +
Preference number: 4 (lower is better)
Translates to: GRASPALVPRVQRRRVPSDGKGD*EPQGGG
Trigger: CCCACCTCCCTGGGGCTCCCAATCCCCTTTGCCATC...TGAGGGCACCCTCCTTCTCTGCACCCTTGGCACGAGGGCAGGGCTGGCTCTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000483868.5
ENST00000489960.5
ENST00000648957.1
3UTR CAA 72 bp CCTGCAGCCCAGGAGTCCAGCTCACTGGCCGTACTGTaGGCCCTGTCCGCTATCAACCCTCCAGGCCCTCCC +
Preference number: 4 (lower is better)
Translates to: PAAQESSSLAVL*ALSAINPPGPP
Trigger: GGGAGGGCCTGGAGGGTTGATAGCGGACAGGGCCAACAGTACGGCCAGTGAGCTGGACTCCTGGGCTGCAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355552.8
ENST00000648957.1
CDS-3UTR TCA 90 bp GGGAGAGCCAGCCCTGCCCTCGTGCCAAGGGTGCAGAGAAGGAGGGTGCCCTCAAAATGGGGCTGGAGGTaGTGCGGATCTTCGCCCGAG +
Preference number: 4 (lower is better)
Translates to: GRASPALVPRVQRRRVPSKWGWR*CGSSPE
Trigger: CTCGGGCGAAGATCCGCATCACCTCCAGCCCCATTT...TGAGGGCACCCTCCTTCTCTGCACCCTTGGCACGAGGGCAGGGCTGGCTCTCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000483868.5
ENST00000489960.5
ENST00000648957.1
CDS-3UTR TCA 90 bp GGGATTGGGAGCCCCAGGGAGGTGGGGCCTCCAGACTCATGGTGGGAACAGGGCAAATGGGGCTGGAGGTaGTGCGGATCTTCGCCCGAG +
Preference number: 4 (lower is better)
Translates to: GIGSPREVGPPDSWWEQGKWGWR*CGSSPE
Trigger: CTCGGGCGAAGATCCGCATCACCTCCAGCCCCATTT...GCCCTGTTCCCACCATGAGTCTGGAGGCCCCACCTCCCTGGGGCTCCCAATCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000483868.5
ENST00000489960.5
ENST00000648957.1
CDS-3UTR TCA 90 bp GCTCACTGGCCGTACTGTTGGCCCTGTCCGCTATCAACCCTCCAGGCCCTCCCACCAGGGTCCCCTGGGTaGCAGAGTAGGCCAGGGACA +
Preference number: 4 (lower is better)
Translates to: AHWPYCWPCPLSTLQALPPGSPG*QSRPGT
Trigger: TGTCCCTGGCCTACTCTGTCACCCAGGGGACCCTGG...TGGGAGGGCCTGGAGGGTTGATAGCGGACAGGGCCAACAGTACGGCCAGTGAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355552.8
ENST00000648957.1
CDS-3UTR TCA 90 bp GCTCACTGGCCGTACTGTTGGCCCTGTCCGCTATCAACCCTCCAGGCCCTCCCAGCTGCCCTCAGGCATTaGTGGCCTTCCAGCGCTCGC +
Preference number: 4 (lower is better)
Translates to: AHWPYCWPCPLSTLQALPAALRH*WPSSAR
Trigger: GCGAGCGCTGGAAGGCCATCAATGCCTGAGGGCAGC...TGGGAGGGCCTGGAGGGTTGATAGCGGACAGGGCCAACAGTACGGCCAGTGAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355552.8
ENST00000648957.1
CDS-3UTR GCA 90 bp GGAGCCCCAGGGAGGTGGGGCCTCCAGACTCATGGTGGGAACAGGGCCACACAGGTGGGGGTAGCGCTGTaGTCCCATTGGCCCAAGTCA +
Preference number: 4 (lower is better)
Translates to: GAPGRWGLQTHGGNRATQVGVAL*SHWPKS
Trigger: TGACTTGGGCCAATGGGAGCACAGCGCTACCCCCAC...CTGTGTGGCCCTGTTCCCACCATGAGTCTGGAGGCCCCACCTCCCTGGGGCTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000483868.5
ENST00000489960.5
ENST00000648957.1
CDS-3UTR GCA 90 bp TGGGAACAGGGCCACACAGGGCTACTGCCCACAGAACGTCCCTTGACCTGGTCCCCACGGCCCGGGCAATaGCCACCAGCGCCACCACAA +
Preference number: 4 (lower is better)
Translates to: WEQGHTGLLPTERPLTWSPRPGQ*PPAPPQ
Trigger: TTGTGGTGGCGCTGGTGGGCATTGCCCGGGCCGTGG...GGACCAGGTCAAGGGACGTTCTGTGGGCAGTAGCCCTGTGTGGCCCTGTTCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000483868.5
ENST00000489960.5
ENST00000648957.1
CDS-3UTR GCA 90 bp GGAGCCCCAGGGAGGTGGGGCCTCCAGACTCATGGTGGGAACAGGGCCACACAGTCCCCGAGTCCTGTCTaGTGGGGGCCTACTATGTGC +
Preference number: 4 (lower is better)
Translates to: GAPGRWGLQTHGGNRATQSPSPV*WGPTMC
Trigger: GCACATAGTAGGCCCCCAGCAGACAGGACTCGGGGA...CTGTGTGGCCCTGTTCCCACCATGAGTCTGGAGGCCCCACCTCCCTGGGGCTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000355552.8
ENST00000648957.1
CDS-3UTR CCA 90 bp CCAGCGCTCGCTGTCTGTGCTGTTGATGCTGCCAGTGTGGCAGGGCATGGAAGCCCCATCCGCCGCCACTaGGTGTGCGCGGATCCAGCA +
Preference number: 4 (lower is better)
Translates to: PALAVCAVDAASVAGHGSPIRRH*VCADPA
Trigger: TGCTGGATCCGCGCACACCCAGTGGCGGCGGATGGG...GCTTCCATGCCCTGCCACACTGGCAGCATCAACAGCACAGACAGCGAGCGCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296210.11
ENST00000393400.6
ENST00000483868.5
CDS-3UTR CCA 90 bp GTGGGAACAGGGCCACACAGGGCTACTGCCCACAGAACGTCCCTTGACCTGGTCCCCATCCGCCGCCACTaGGTGTGCGCGGATCCAGCA +
Preference number: 4 (lower is better)
Translates to: VGTGPHRATAHRTSLDLVPIRRH*VCADPA
Trigger: TGCTGGATCCGCGCACACCCAGTGGCGGCGGATGGG...GACCAGGTCAAGGGACGTTCTGTGGGCAGTAGCCCTGTGTGGCCCTGTTCCCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000483868.5
ENST00000489960.5
CDS-3UTR CCA 90 bp GGAGCCCCAGGGAGGTGGGGCCTCCAGACTCATGGTGGGAACAGGGCCACACAGAGGTGCTCACCGTCATaGATACCACGGCCCGGGCAA +
Preference number: 4 (lower is better)
Translates to: GAPGRWGLQTHGGNRATQRCSPS*IPRPGQ
Trigger: TTGCCCGGGCCGTGGTATCCATGACGGTGAGCACCT...CTGTGTGGCCCTGTTCCCACCATGAGTCTGGAGGCCCCACCTCCCTGGGGCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000483868.5
ENST00000489960.5
ENST00000648957.1
CDS-3UTR CCA 90 bp GCTCACTGGCCGTACTGTTGGCCCTGTCCGCTATCAACCCTCCAGGCCCTCCCAGGACTCTGGGCCTGCTaGCCTCCTCTCTGGCCTGTC +
Preference number: 4 (lower is better)
Translates to: AHWPYCWPCPLSTLQALPGLWAC*PPLWPV
Trigger: GACAGGCCAGAGAGGAGGCCAGCAGGCCCAGAGTCC...TGGGAGGGCCTGGAGGGTTGATAGCGGACAGGGCCAACAGTACGGCCAGTGAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355552.8
ENST00000648957.1
CDS-3UTR CCA 90 bp GGAGCCCCAGGGAGGTGGGGCCTCCAGACTCATGGTGGGAACAGGGCCACACAGCCTCCAGACTCATGGTaGGAACAGGGCCACACAGGG +
Preference number: 4 (lower is better)
Translates to: GAPGRWGLQTHGGNRATQPPDSW*EQGHTG
Trigger: CCCTGTGTGGCCCTGTTCCCACCATGAGTCTGGAGG...CTGTGTGGCCCTGTTCCCACCATGAGTCTGGAGGCCCCACCTCCCTGGGGCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000483868.5
ENST00000489960.5
ENST00000648957.1
CDS-3UTR CCA 90 bp CCACACAGGGCTACTGCCCACAGAACGTCCCTTGACCTGGTCCTCCTCCCCTGGGGAGCCCCAGGGAGGTaGGGCCTCCAGACTCATGGT +
Preference number: 4 (lower is better)
Translates to: PHRATAHRTSLDLVLLPWGAPGR*GLQTHG
Trigger: ACCATGAGTCTGGAGGCCCCACCTCCCTGGGGCTCC...CCAGGGGAGGAGGACCAGGTCAAGGGACGTTCTGTGGGCAGTAGCCCTGTGTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000483868.5
ENST00000489960.5
ENST00000648957.1
CDS-3UTR CCA 90 bp GATTGGGAGCCCCAGGGAGGTGGGGCCTCCAGACTCATGGTGGGAACAGGGCCACTGGGGACTGCTCCTTaGTTGAGCAGAGGCCCCCTG +
Preference number: 4 (lower is better)
Translates to: DWEPQGGGASRLMVGTGPLGTAP*LSRGPL
Trigger: CAGGGGGCCTCTGCTCAACCAAGGAGCAGTCCCCAG...TGGCCCTGTTCCCACCATGAGTCTGGAGGCCCCACCTCCCTGGGGCTCCCAATC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000355552.8
ENST00000648957.1
CDS-3UTR TCA 90 bp GGGATTGGGAGCCCCAGGGAGGTGGGGCCTCCAGACTCATGGTGGGAACAGGGCAGCGATGAGGCACACTaGTGTTTGGTGCCAGGGGTG +
Preference number: 4 (lower is better)
Translates to: GIGSPREVGPPDSWWEQGSDEAH*CLVPGV
Trigger: CACCCCTGGCACCAAACATCAGTGTGCCTCATCGCT...GCCCTGTTCCCACCATGAGTCTGGAGGCCCCACCTCCCTGGGGCTCCCAATCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000483868.5
ENST00000489960.5
ENST00000648957.1
CDS-3UTR TCA 90 bp GGAGCCCCAGGGAGGTGGGGCCTCCAGACTCATGGTGGGAACAGGGCCACACAGAGCGATGAGGCACACTaGTGTTTGGTGCCAGGGGTG +
Preference number: 4 (lower is better)
Translates to: GAPGRWGLQTHGGNRATQSDEAH*CLVPGV
Trigger: CACCCCTGGCACCAAACATCAGTGTGCCTCATCGCT...CTGTGTGGCCCTGTTCCCACCATGAGTCTGGAGGCCCCACCTCCCTGGGGCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000483868.5
ENST00000489960.5
ENST00000648957.1
CDS-3UTR TCA 90 bp GGAGCCCCAGGGAGGTGGGGCCTCCAGACTCATGGTGGGAACAGGGCCACACAGTGGCCAGCACCCGCTTaGTGCTGGACTTACTCTCCA +
Preference number: 4 (lower is better)
Translates to: GAPGRWGLQTHGGNRATQWPAPA*CWTYSP
Trigger: TGGAGAGTAAGTCCAGCATCAAGCGGGTGCTGGCCA...CTGTGTGGCCCTGTTCCCACCATGAGTCTGGAGGCCCCACCTCCCTGGGGCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000483868.5
ENST00000489960.5
ENST00000648957.1
CDS-3UTR TCA 90 bp TGGGAACAGGGCCACACAGGGCTACTGCCCACAGAACGTCCCTTGACCTGGTCCGCTGCCCTCAGGCATTaGTGGCCTTCCAGCGCTCGC +
Preference number: 4 (lower is better)
Translates to: WEQGHTGLLPTERPLTWSAALRH*WPSSAR
Trigger: GCGAGCGCTGGAAGGCCATCAATGCCTGAGGGCAGC...GGACCAGGTCAAGGGACGTTCTGTGGGCAGTAGCCCTGTGTGGCCCTGTTCCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000483868.5
ENST00000489960.5
ENST00000648957.1
CDS-3UTR TCA 90 bp GGCCACACAGGGCTACTGCCCACAGAACGTCCCTTGACCTGGTCCTCCTCCCCTCCACAGAACGTCCCTTaGCCTGGTCCTCCTCCCCTG +
Preference number: 4 (lower is better)
Translates to: GHTGLLPTERPLTWSSSPPQNVP*PGPPPL
Trigger: CAGGGGAGGAGGACCAGGTCAAGGGACGTTCTGTGG...AGGGGAGGAGGACCAGGTCAAGGGACGTTCTGTGGGCAGTAGCCCTGTGTGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000483868.5
ENST00000489960.5
ENST00000648957.1
CDS-3UTR GCA 90 bp TGGCAGCTGCCCTCAGGCATTGATGGCCTTCCAGCGCTCGCTGTCTGTGCTGTTCCACGGCCCGGGCAATaGCCACCAGCGCCACCACAA +
Preference number: 4 (lower is better)
Translates to: WQLPSGIDGLPALAVCAVPRPGQ*PPAPPQ
Trigger: TTGTGGTGGCGCTGGTGGGCATTGCCCGGGCCGTGG...AACAGCACAGACAGCGAGCGCTGGAAGGCCATCAATGCCTGAGGGCAGCTGCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296210.11
ENST00000393400.6
ENST00000483868.5
CDS-3UTR GCA 90 bp AGCCTGGGCCATGTCACTGAGCAGTATGAGAGCAGGTGGGAAGGGGAGGAGGGTCCACGGCCCGGGCAATaGCCACCAGCGCCACCACAA +
Preference number: 4 (lower is better)
Translates to: SLGHVTEQYESRWEGEEGPRPGQ*PPAPPQ
Trigger: TTGTGGTGGCGCTGGTGGGCATTGCCCGGGCCGTGG...ACCCTCCTCCCCTTCCCACCTGCTCTCATACTGCTCAGTGACATGGCCCAGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000483868.5
ENST00000489960.5
ENST00000648957.1
CDS-3UTR GCA 90 bp GCGCTCGCTGTCTGTGCTGTTGATGCTGCCAGTGTGGCAGGGCATGGAAGCGATCCACGGCCCGGGCAATaGCCACCAGCGCCACCACAA +
Preference number: 4 (lower is better)
Translates to: ALAVCAVDAASVAGHGSDPRPGQ*PPAPPQ
Trigger: TTGTGGTGGCGCTGGTGGGCATTGCCCGGGCCGTGG...ATCGCTTCCATGCCCTGCCACACTGGCAGCATCAACAGCACAGACAGCGAGCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296210.11
ENST00000393400.6
ENST00000483868.5
CDS-3UTR GCA 90 bp GGGATTGGGAGCCCCAGGGAGGTGGGGCCTCCAGACTCATGGTGGGAACAGGGCTGCAGAGAAGGAGGGTaGCCTCAGCCAACCTTGCCA +
Preference number: 4 (lower is better)
Translates to: GIGSPREVGPPDSWWEQGCREGG*PQPTLP
Trigger: TGGCAAGGTTGGCTGAGGGCACCCTCCTTCTCTGCA...GCCCTGTTCCCACCATGAGTCTGGAGGCCCCACCTCCCTGGGGCTCCCAATCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000483868.5
ENST00000489960.5
ENST00000648957.1
CDS-3UTR GCA 90 bp GGGAGAGCCAGCCCTGCCCTCGTGCCAAGGGTGCAGAGAAGGAGGGTGCCCTCATGCAGAGAAGGAGGGTaGCCTCAGCCAACCTTGCCA +
Preference number: 4 (lower is better)
Translates to: GRASPALVPRVQRRRVPSCREGG*PQPTLP
Trigger: TGGCAAGGTTGGCTGAGGGCACCCTCCTTCTCTGCA...TGAGGGCACCCTCCTTCTCTGCACCCTTGGCACGAGGGCAGGGCTGGCTCTCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000483868.5
ENST00000489960.5
ENST00000648957.1
CDS-3UTR GCA 90 bp GATTGGGAGCCCCAGGGAGGTGGGGCCTCCAGACTCATGGTGGGAACAGGGCCAGAGAAGGCAGGGAGATaGGCTCCTTCAGCGGGGTCT +
Preference number: 4 (lower is better)
Translates to: DWEPQGGGASRLMVGTGPEKAGR*APSAGS
Trigger: AGACCCCGCTGAAGGAGCGCATCTCCCTGCCTTCTC...TGGCCCTGTTCCCACCATGAGTCTGGAGGCCCCACCTCCCTGGGGCTCCCAATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000355552.8
ENST00000450633.6
ENST00000489960.5
ENST00000648957.1
CDS-3UTR CCA 90 bp GGGATTGGGAGCCCCAGGGAGGTGGGGCCTCCAGACTCATGGTGGGAACAGGGCCCCAGTACCGGACCCTaGAGGTGCCAATGTCTTCGT +
Preference number: 4 (lower is better)
Translates to: GIGSPREVGPPDSWWEQGPSTGP*RCQCLR
Trigger: ACGAAGACATTGGCACCTCCAGGGTCCGGTACTGGG...GCCCTGTTCCCACCATGAGTCTGGAGGCCCCACCTCCCTGGGGCTCCCAATCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000483868.5
ENST00000489960.5
ENST00000648957.1
CDS-3UTR CCA 90 bp GATTGGGAGCCCCAGGGAGGTGGGGCCTCCAGACTCATGGTGGGAACAGGGCCAGACTTACTCTCCAGGTaGCCAAAGGCCAGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: DWEPQGGGASRLMVGTGPDLLSR*PKARPR
Trigger: CCTGGGCCTGGCCTTTGGCCACCTGGAGAGTAAGTC...TGGCCCTGTTCCCACCATGAGTCTGGAGGCCCCACCTCCCTGGGGCTCCCAATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000483868.5
ENST00000489960.5
ENST00000648957.1
CDS-3UTR CCA 90 bp GTGGGAACAGGGCCACACAGGGCTACTGCCCACAGAACGTCCCTTGACCTGGTCGCGTGCTCGAGTAGCTaGCAGCTGAGGCCCCAGCAG +
Preference number: 4 (lower is better)
Translates to: VGTGPHRATAHRTSLDLVACSSS*QLRPQQ
Trigger: CTGCTGGGGCCTCAGCTGCCAGCTACTCGAGCACGC...GACCAGGTCAAGGGACGTTCTGTGGGCAGTAGCCCTGTGTGGCCCTGTTCCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000483868.5
ENST00000489960.5
ENST00000648957.1
CDS-3UTR CCA 90 bp AGGCCCTGGCAGCTGCCCTCAGGCATTGATGGCCTTCCAGCGCTCGCTGTCTGTGTCCTCCACAGGCCCTaGCAGCTGCCCTCAGGCATT +
Preference number: 4 (lower is better)
Translates to: RPWQLPSGIDGLPALAVCVLHRP*QLPSGI
Trigger: AATGCCTGAGGGCAGCTGCCAGGGCCTGTGGAGGAC...ACAGACAGCGAGCGCTGGAAGGCCATCAATGCCTGAGGGCAGCTGCCAGGGCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296210.11
ENST00000393400.6
ENST00000483868.5
CDS-3UTR CCA 90 bp GATGGCCTTCCAGCGCTCGCTGTCTGTGCTGTTGATGCTGCCAGTGTGGCAGGGGGACTCTGGGCCTGCTaGCCTCCTCTCTGGCCTGTC +
Preference number: 4 (lower is better)
Translates to: DGLPALAVCAVDAASVAGGLWAC*PPLWPV
Trigger: GACAGGCCAGAGAGGAGGCCAGCAGGCCCAGAGTCC...CCCTGCCACACTGGCAGCATCAACAGCACAGACAGCGAGCGCTGGAAGGCCATC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296210.11
ENST00000393400.6
ENST00000483868.5
CDS-3UTR CCA 90 bp AGCCTGGGCCATGTCACTGAGCAGTATGAGAGCAGGTGGGAAGGGGAGGAGGGTCTGGTCCTCCTCCCCTaGGGACTCTGGGCCTGCTGG +
Preference number: 4 (lower is better)
Translates to: SLGHVTEQYESRWEGEEGLVLLP*GLWACW
Trigger: CCAGCAGGCCCAGAGTCCCCAGGGGAGGAGGACCAG...ACCCTCCTCCCCTTCCCACCTGCTCTCATACTGCTCAGTGACATGGCCCAGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000483868.5
ENST00000489960.5
ENST00000648957.1
CDS-3UTR CCA 90 bp GATTGGGAGCCCCAGGGAGGTGGGGCCTCCAGACTCATGGTGGGAACAGGGCCACCTCCAGACTCATGGTaGGAACAGGGCCACACAGGG +
Preference number: 4 (lower is better)
Translates to: DWEPQGGGASRLMVGTGPPPDSW*EQGHTG
Trigger: CCCTGTGTGGCCCTGTTCCCACCATGAGTCTGGAGG...TGGCCCTGTTCCCACCATGAGTCTGGAGGCCCCACCTCCCTGGGGCTCCCAATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000483868.5
ENST00000489960.5
ENST00000648957.1
CDS-3UTR CCA 90 bp TGCTGCCAGTGTGGCAGGGCATGGAAGCGATGTCATCCAGGTAGGCCACCCCGCGATGGCAAAGGGGATTaGGAGCCCCAGGGAGGTGGG +
Preference number: 4 (lower is better)
Translates to: CCQCGRAWKRCHPGRPPRDGKGD*EPQGGG
Trigger: CCCACCTCCCTGGGGCTCCCAATCCCCTTTGCCATC...GCGGGGTGGCCTACCTGGATGACATCGCTTCCATGCCCTGCCACACTGGCAGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000393400.6
ENST00000483868.5
CDS-3UTR CCA 90 bp GTGGGAACAGGGCCACACAGGGCTACTGCCCACAGAACGTCCCTTGACCTGGTCGCCAGCAGCCAGCCCTaGATGTGCAGCGGTCGCATG +
Preference number: 4 (lower is better)
Translates to: VGTGPHRATAHRTSLDLVASSQP*MCSGRM
Trigger: CATGCGACCGCTGCACATCCAGGGCTGGCTGCTGGC...GACCAGGTCAAGGGACGTTCTGTGGGCAGTAGCCCTGTGTGGCCCTGTTCCCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648957.1
CDS-3UTR CCA 90 bp AGCCTGGGCCATGTCACTGAGCAGTATGAGAGCAGGTGGGAAGGGGAGGAGGGTTGTCAGTGGACCAGCTaGCGGCAGCCGCGCTCCACC +
Preference number: 4 (lower is better)
Translates to: SLGHVTEQYESRWEGEEGCQWTS*RQPRST
Trigger: GGTGGAGCGCGGCTGCCGCCAGCTGGTCCACTGACA...ACCCTCCTCCCCTTCCCACCTGCTCTCATACTGCTCAGTGACATGGCCCAGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489960.5
CDS-3UTR TCA 90 bp GGGATTGGGAGCCCCAGGGAGGTGGGGCCTCCAGACTCATGGTGGGAACAGGGCAGCAGCAGGCAGCGATaGGGCACACTGATGTTTGGT +
Preference number: 4 (lower is better)
Translates to: GIGSPREVGPPDSWWEQGSSRQR*GTLMFG
Trigger: ACCAAACATCAGTGTGCCTCATCGCTGCCTGCTGCT...GCCCTGTTCCCACCATGAGTCTGGAGGCCCCACCTCCCTGGGGCTCCCAATCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000483868.5
ENST00000489960.5
ENST00000648957.1
CDS-3UTR TCA 90 bp GGGAGAGCCAGCCCTGCCCTCGTGCCAAGGGTGCAGAGAAGGAGGGTGCCCTCAAGCAGCAGGCAGCGATaGGGCACACTGATGTTTGGT +
Preference number: 4 (lower is better)
Translates to: GRASPALVPRVQRRRVPSSSRQR*GTLMFG
Trigger: ACCAAACATCAGTGTGCCTCATCGCTGCCTGCTGCT...TGAGGGCACCCTCCTTCTCTGCACCCTTGGCACGAGGGCAGGGCTGGCTCTCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000483868.5
ENST00000489960.5
ENST00000648957.1
CDS-3UTR TCA 90 bp CGATGTCATCCAGGTAGGCCACCCCGCCGGCAGAGTCGAACTGCGTGCTCGAGTAGGCCAGGCCCAGGATaGTCACACTCAGCTCGATGG +
Preference number: 4 (lower is better)
Translates to: RCHPGRPPRRQSRTACSSRPGPG*SHSARW
Trigger: CCATCGAGCTGAGTGTGATCATCCTGGGCCTGGCCT...ACTCGAGCACGCAGTTCGACTCTGCCGGCGGGGTGGCCTACCTGGATGACATCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393400.6
ENST00000483868.5
CDS-3UTR TCA 90 bp CCACACAGGGCTACTGCCCACAGAACGTCCCTTGACCTGGTCCTCCTCCCCTGGAGGCCAGGCCCAGGATaGTCACACTCAGCTCGATGG +
Preference number: 4 (lower is better)
Translates to: PHRATAHRTSLDLVLLPWRPGPG*SHSARW
Trigger: CCATCGAGCTGAGTGTGATCATCCTGGGCCTGGCCT...CCAGGGGAGGAGGACCAGGTCAAGGGACGTTCTGTGGGCAGTAGCCCTGTGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000483868.5
ENST00000489960.5
ENST00000648957.1
CDS-3UTR TCA 90 bp GGCCCTGGAAGGAAAGCCTGGGCCATGTCACTGAGCAGTATGAGAGCAGGTGGGCCAGGGTCCCCTGGGTaGCAGAGTAGGCCAGGGACA +
Preference number: 4 (lower is better)
Translates to: GPGRKAWAMSLSSMRAGGPGSPG*QSRPGT
Trigger: TGTCCCTGGCCTACTCTGTCACCCAGGGGACCCTGG...CCCACCTGCTCTCATACTGCTCAGTGACATGGCCCAGGCTTTCCTTCCAGGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000483868.5
ENST00000489960.5
ENST00000648957.1
CDS-3UTR TCA 90 bp GACTCATGGTGGGAACAGGGCCACACAGGGCTACTGCCCACAGAACGTCCCTTGCCAGGGTCCCCTGGGTaGCAGAGTAGGCCAGGGACA +
Preference number: 4 (lower is better)
Translates to: DSWWEQGHTGLLPTERPLPGSPG*QSRPGT
Trigger: TGTCCCTGGCCTACTCTGTCACCCAGGGGACCCTGG...CAAGGGACGTTCTGTGGGCAGTAGCCCTGTGTGGCCCTGTTCCCACCATGAGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000483868.5
ENST00000489960.5
ENST00000648957.1
CDS-3UTR TCA 90 bp GGAGCCCCAGGGAGGTGGGGCCTCCAGACTCATGGTGGGAACAGGGCCACACAGGCGGAGCGAAGAAGCTaGAGTACAGGAAGGTTGTGG +
Preference number: 4 (lower is better)
Translates to: GAPGRWGLQTHGGNRATQAERRS*STGRLW
Trigger: CCACAACCTTCCTGTACTTCAGCTTCTTCGCTCCGC...CTGTGTGGCCCTGTTCCCACCATGAGTCTGGAGGCCCCACCTCCCTGGGGCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000483868.5
ENST00000489960.5
ENST00000648957.1
CDS-3UTR TCA 90 bp GGGAGAGCCAGCCCTGCCCTCGTGCCAAGGGTGCAGAGAAGGAGGGTGCCCTCAGGGTCTTGGGAAGGATaGCCACCAGAGAGTAGACCA +
Preference number: 4 (lower is better)
Translates to: GRASPALVPRVQRRRVPSGSWEG*PPESRP
Trigger: TGGTCTACTCTCTGGTGGTCATCCTTCCCAAGACCC...TGAGGGCACCCTCCTTCTCTGCACCCTTGGCACGAGGGCAGGGCTGGCTCTCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355552.8
ENST00000450633.6
ENST00000483868.5
ENST00000489960.5
ENST00000648957.1
CDS-3UTR GCA 90 bp CCCTGGAAGGAAAGCCTGGGCCATGTCACTGAGCAGTATGAGAGCAGGTGGGAACGCCGCCACTGGGTGTaGGCGGATCCAGCACAGGCC +
Preference number: 4 (lower is better)
Translates to: PWKESLGHVTEQYESRWERRHWV*ADPAQA
Trigger: GGCCTGTGCTGGATCCGCGCACACCCAGTGGCGGCG...TTCCCACCTGCTCTCATACTGCTCAGTGACATGGCCCAGGCTTTCCTTCCAGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000483868.5
ENST00000489960.5
CDS-3UTR GCA 90 bp GGGATTGGGAGCCCCAGGGAGGTGGGGCCTCCAGACTCATGGTGGGAACAGGGCACCGGACCCTGGAGGTaGCAATGTCTTCGTAGAGCA +
Preference number: 4 (lower is better)
Translates to: GIGSPREVGPPDSWWEQGTGPWR*QCLRRA
Trigger: TGCTCTACGAAGACATTGGCACCTCCAGGGTCCGGT...GCCCTGTTCCCACCATGAGTCTGGAGGCCCCACCTCCCTGGGGCTCCCAATCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000483868.5
ENST00000489960.5
ENST00000648957.1
CDS-3UTR GCA 90 bp GGAAGGAAAGCCTGGGCCATGTCACTGAGCAGTATGAGAGCAGGTGGGAAGGGGCCACGGCCCGGGCAATaGCCACCAGCGCCACCACAA +
Preference number: 4 (lower is better)
Translates to: GRKAWAMSLSSMRAGGKGPRPGQ*PPAPPQ
Trigger: TTGTGGTGGCGCTGGTGGGCATTGCCCGGGCCGTGG...CCCCTTCCCACCTGCTCTCATACTGCTCAGTGACATGGCCCAGGCTTTCCTTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000483868.5
ENST00000489960.5
ENST00000648957.1
CDS-3UTR GCA 90 bp GATTGGGAGCCCCAGGGAGGTGGGGCCTCCAGACTCATGGTGGGAACAGGGCCACAGAGTCGAACTGCGTaGTCGAGTAGCTGGCAGCTG +
Preference number: 4 (lower is better)
Translates to: DWEPQGGGASRLMVGTGPQSRTA*SSSWQL
Trigger: CAGCTGCCAGCTACTCGAGCACGCAGTTCGACTCTG...TGGCCCTGTTCCCACCATGAGTCTGGAGGCCCCACCTCCCTGGGGCTCCCAATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000483868.5
ENST00000489960.5
ENST00000648957.1
CDS-3UTR GCA 90 bp GGGATTGGGAGCCCCAGGGAGGTGGGGCCTCCAGACTCATGGTGGGAACAGGGCTCGTCCAGCCCAAATTaGGAAAACGGCCACAGTCCC +
Preference number: 4 (lower is better)
Translates to: GIGSPREVGPPDSWWEQGSSSPN*ENGHSP
Trigger: GGGACTGTGGCCGTTTTCGCAATTTGGGCTGGACGA...GCCCTGTTCCCACCATGAGTCTGGAGGCCCCACCTCCCTGGGGCTCCCAATCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355552.8
ENST00000393400.6
CDS-3UTR GCA 90 bp CCACACAGGGCTACTGCCCACAGAACGTCCCTTGACCTGGTCCTCCTCCCCTGGACACTCCCCAGCCCCTaGAGTAGGTTGAGCAGTGCC +
Preference number: 4 (lower is better)
Translates to: PHRATAHRTSLDLVLLPWTLPSP*SRLSSA
Trigger: GGCACTGCTCAACCTACTGCAGGGGCTGGGGAGTGT...CCAGGGGAGGAGGACCAGGTCAAGGGACGTTCTGTGGGCAGTAGCCCTGTGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000489960.5
ENST00000648957.1
CDS-3UTR GCA 90 bp GGCCACACAGGGCTACTGCCCACAGAACGTCCCTTGACCTGGTCCTCCTCCCCTACACTCCCCAGCCCCTaGAGTAGGTTGAGCAGTGCC +
Preference number: 4 (lower is better)
Translates to: GHTGLLPTERPLTWSSSPTLPSP*SRLSSA
Trigger: GGCACTGCTCAACCTACTGCAGGGGCTGGGGAGTGT...AGGGGAGGAGGACCAGGTCAAGGGACGTTCTGTGGGCAGTAGCCCTGTGTGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000489960.5
ENST00000648957.1
CDS-3UTR GCA 90 bp GGGATTGGGAGCCCCAGGGAGGTGGGGCCTCCAGACTCATGGTGGGAACAGGGCCGGAAGAGAGAGGCCTaGGTTTCTCACTCGGAAAGC +
Preference number: 4 (lower is better)
Translates to: GIGSPREVGPPDSWWEQGRKREA*VSHSES
Trigger: GCTTTCCGAGTGAGAAACGCAGGCCTCTCTCTTCCG...GCCCTGTTCCCACCATGAGTCTGGAGGCCCCACCTCCCTGGGGCTCCCAATCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489960.5
CDS-3UTR GCA 90 bp GGGAGAGCCAGCCCTGCCCTCGTGCCAAGGGTGCAGAGAAGGAGGGTGCCCTCAGCAGAGACAAGACGCTaGTTCACGGAAGAGAGAGGC +
Preference number: 4 (lower is better)
Translates to: GRASPALVPRVQRRRVPSAETRR*FTEERG
Trigger: GCCTCTCTCTTCCGTGAAGCAGCGTCTTGTCTCTGC...TGAGGGCACCCTCCTTCTCTGCACCCTTGGCACGAGGGCAGGGCTGGCTCTCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489960.5
CDS-3UTR CCA 90 bp CACTGCAGCCAGCAAACTTCGGCTGACACTGTGCCATCTTGGACTGCATGTGGACCAGACCAGGCGGCCTaGGCCGGGAAGCGTCGCGCA +
Preference number: 4 (lower is better)
Translates to: HCSQQTSADTVPSWTACGPDQAA*AGKRRA
Trigger: TGCGCGACGCTTCCCGGCCCAGGCCGCCTGGTCTGG...TCCACATGCAGTCCAAGATGGCACAGTGTCAGCCGAAGTTTGCTGGCTGCAGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355552.8
CDS-3UTR CCA 90 bp GATTGGGAGCCCCAGGGAGGTGGGGCCTCCAGACTCATGGTGGGAACAGGGCCACCCAGTACCGGACCCTaGAGGTGCCAATGTCTTCGT +
Preference number: 4 (lower is better)
Translates to: DWEPQGGGASRLMVGTGPPSTGP*RCQCLR
Trigger: ACGAAGACATTGGCACCTCCAGGGTCCGGTACTGGG...TGGCCCTGTTCCCACCATGAGTCTGGAGGCCCCACCTCCCTGGGGCTCCCAATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000483868.5
ENST00000489960.5
ENST00000648957.1
CDS-3UTR CCA 90 bp GGCCACACAGGGCTACTGCCCACAGAACGTCCCTTGACCTGGTCCTCCTCCCCTGACTTACTCTCCAGGTaGCCAAAGGCCAGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: GHTGLLPTERPLTWSSSPDLLSR*PKARPR
Trigger: CCTGGGCCTGGCCTTTGGCCACCTGGAGAGTAAGTC...AGGGGAGGAGGACCAGGTCAAGGGACGTTCTGTGGGCAGTAGCCCTGTGTGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000483868.5
ENST00000489960.5
ENST00000648957.1
CDS-3UTR CCA 90 bp GGGAGAGCCAGCCCTGCCCTCGTGCCAAGGGTGCAGAGAAGGAGGGTGCCCTCAAGGAGAAGAGGATCTTaGGCTCCGAGCCGAAGAAGC +
Preference number: 4 (lower is better)
Translates to: GRASPALVPRVQRRRVPSRRRGS*APSRRS
Trigger: GCTTCTTCGGCTCGGAGCCCAAGATCCTCTTCTCCT...TGAGGGCACCCTCCTTCTCTGCACCCTTGGCACGAGGGCAGGGCTGGCTCTCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000483868.5
ENST00000489960.5
ENST00000648957.1
CDS-3UTR CCA 90 bp GGAGCCCCAGGGAGGTGGGGCCTCCAGACTCATGGTGGGAACAGGGCCACACAGAGGAGAAGAGGATCTTaGGCTCCGAGCCGAAGAAGC +
Preference number: 4 (lower is better)
Translates to: GAPGRWGLQTHGGNRATQRRRGS*APSRRS
Trigger: GCTTCTTCGGCTCGGAGCCCAAGATCCTCTTCTCCT...CTGTGTGGCCCTGTTCCCACCATGAGTCTGGAGGCCCCACCTCCCTGGGGCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000483868.5
ENST00000489960.5
ENST00000648957.1
CDS-3UTR CCA 90 bp GGGAGAGCCAGCCCTGCCCTCGTGCCAAGGGTGCAGAGAAGGAGGGTGCCCTCACAGTGTGGCAGGGCATaGAAGCGATGTCATCCAGGT +
Preference number: 4 (lower is better)
Translates to: GRASPALVPRVQRRRVPSQCGRA*KRCHPG
Trigger: ACCTGGATGACATCGCTTCCATGCCCTGCCACACTG...TGAGGGCACCCTCCTTCTCTGCACCCTTGGCACGAGGGCAGGGCTGGCTCTCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000483868.5
ENST00000489960.5
ENST00000648957.1
CDS-3UTR CCA 90 bp CGGCAGAGTCGAACTGCGTGCTCGAGTAGCTGGCAGCTGAGGCCCCAGCAGCCCTTGATGCTGCCAGTGTaGCAGGGCATGGAAGCGATG +
Preference number: 4 (lower is better)
Translates to: RQSRTACSSSWQLRPQQPLMLPV*QGMEAM
Trigger: CATCGCTTCCATGCCCTGCCACACTGGCAGCATCAA...GGGCTGCTGGGGCCTCAGCTGCCAGCTACTCGAGCACGCAGTTCGACTCTGCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393400.6
ENST00000483868.5
CDS-3UTR CCA 90 bp GGAGCCCCAGGGAGGTGGGGCCTCCAGACTCATGGTGGGAACAGGGCCACACAGTTGATGCTGCCAGTGTaGCAGGGCATGGAAGCGATG +
Preference number: 4 (lower is better)
Translates to: GAPGRWGLQTHGGNRATQLMLPV*QGMEAM
Trigger: CATCGCTTCCATGCCCTGCCACACTGGCAGCATCAA...CTGTGTGGCCCTGTTCCCACCATGAGTCTGGAGGCCCCACCTCCCTGGGGCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000483868.5
ENST00000489960.5
ENST00000648957.1
CDS-3UTR CCA 90 bp GATGGCCTTCCAGCGCTCGCTGTCTGTGCTGTTGATGCTGCCAGTGTGGCAGGGGTCCTCCACAGGCCCTaGCAGCTGCCCTCAGGCATT +
Preference number: 4 (lower is better)
Translates to: DGLPALAVCAVDAASVAGVLHRP*QLPSGI
Trigger: AATGCCTGAGGGCAGCTGCCAGGGCCTGTGGAGGAC...CCCTGCCACACTGGCAGCATCAACAGCACAGACAGCGAGCGCTGGAAGGCCATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296210.11
ENST00000393400.6
ENST00000483868.5
CDS-3UTR CCA 90 bp CTCCAGACTCATGGTGGGAACAGGGCCACACAGGGCTACTGCCCACAGAACGTCGGACTCTGGGCCTGCTaGCCTCCTCTCTGGCCTGTC +
Preference number: 4 (lower is better)
Translates to: LQTHGGNRATQGYCPQNVGLWAC*PPLWPV
Trigger: GACAGGCCAGAGAGGAGGCCAGCAGGCCCAGAGTCC...GACGTTCTGTGGGCAGTAGCCCTGTGTGGCCCTGTTCCCACCATGAGTCTGGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000483868.5
ENST00000489960.5
ENST00000648957.1
CDS-3UTR CCA 90 bp GGCCCTGGAAGGAAAGCCTGGGCCATGTCACTGAGCAGTATGAGAGCAGGTGGGGGACTCTGGGCCTGCTaGCCTCCTCTCTGGCCTGTC +
Preference number: 4 (lower is better)
Translates to: GPGRKAWAMSLSSMRAGGGLWAC*PPLWPV
Trigger: GACAGGCCAGAGAGGAGGCCAGCAGGCCCAGAGTCC...CCCACCTGCTCTCATACTGCTCAGTGACATGGCCCAGGCTTTCCTTCCAGGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000483868.5
ENST00000489960.5
ENST00000648957.1
CDS-3UTR CCA 90 bp GCCGAAGAAGCCCCGGAGGAAAGCCACGTAGATGAGCGGAGCGAAGAAGCTGAACTGGTCCTCCTCCCCTaGGGACTCTGGGCCTGCTGG +
Preference number: 4 (lower is better)
Translates to: AEEAPEESHVDERSEEAELVLLP*GLWACW
Trigger: CCAGCAGGCCCAGAGTCCCCAGGGGAGGAGGACCAG...TTCAGCTTCTTCGCTCCGCTCATCTACGTGGCTTTCCTCCGGGGCTTCTTCGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393400.6
ENST00000483868.5
CDS-3UTR CCA 90 bp TGCCCTCAGGCATTGATGGCCTTCCAGCGCTCGCTGTCTGTGCTGTTGATGCTGCTGGTCCTCCTCCCCTaGGGACTCTGGGCCTGCTGG +
Preference number: 4 (lower is better)
Translates to: CPQALMAFQRSLSVLLMLLVLLP*GLWACW
Trigger: CCAGCAGGCCCAGAGTCCCCAGGGGAGGAGGACCAG...CAGCATCAACAGCACAGACAGCGAGCGCTGGAAGGCCATCAATGCCTGAGGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296210.11
ENST00000393400.6
ENST00000483868.5
CDS-3UTR CCA 90 bp GGAAGGAAAGCCTGGGCCATGTCACTGAGCAGTATGAGAGCAGGTGGGAAGGGGCTGGTCCTCCTCCCCTaGGGACTCTGGGCCTGCTGG +
Preference number: 4 (lower is better)
Translates to: GRKAWAMSLSSMRAGGKGLVLLP*GLWACW
Trigger: CCAGCAGGCCCAGAGTCCCCAGGGGAGGAGGACCAG...CCCCTTCCCACCTGCTCTCATACTGCTCAGTGACATGGCCCAGGCTTTCCTTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000483868.5
ENST00000489960.5
ENST00000648957.1
CDS-3UTR CCA 90 bp GTGGGAACAGGGCCACACAGGGCTACTGCCCACAGAACGTCCCTTGACCTGGTCGAACGTCCCTTGACCTaGTCCTCCTCCCCTGGGGAC +
Preference number: 4 (lower is better)
Translates to: VGTGPHRATAHRTSLDLVERPLT*SSSPGD
Trigger: GTCCCCAGGGGAGGAGGACCAGGTCAAGGGACGTTC...GACCAGGTCAAGGGACGTTCTGTGGGCAGTAGCCCTGTGTGGCCCTGTTCCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000483868.5
ENST00000489960.5
ENST00000648957.1
CDS-3UTR CCA 90 bp CCACACAGGGCTACTGCCCACAGAACGTCCCTTGACCTGGTCCTCCTCCCCTGGGGGCCTCCAGACTCATaGTGGGAACAGGGCCACACA +
Preference number: 4 (lower is better)
Translates to: PHRATAHRTSLDLVLLPWGPPDS*WEQGHT
Trigger: TGTGTGGCCCTGTTCCCACCATGAGTCTGGAGGCCC...CCAGGGGAGGAGGACCAGGTCAAGGGACGTTCTGTGGGCAGTAGCCCTGTGTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000483868.5
ENST00000489960.5
ENST00000648957.1
CDS-3UTR CCA 90 bp CTCCAGACTCATGGTGGGAACAGGGCCACACAGGGCTACTGCCCACAGAACGTCGGAGCCCCAGGGAGGTaGGGCCTCCAGACTCATGGT +
Preference number: 4 (lower is better)
Translates to: LQTHGGNRATQGYCPQNVGAPGR*GLQTHG
Trigger: ACCATGAGTCTGGAGGCCCCACCTCCCTGGGGCTCC...GACGTTCTGTGGGCAGTAGCCCTGTGTGGCCCTGTTCCCACCATGAGTCTGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000483868.5
ENST00000489960.5
ENST00000648957.1
CDS-3UTR CCA 90 bp TGGGAACAGGGCCACACAGGGCTACTGCCCACAGAACGTCCCTTGACCTGGTCCGATGGCAAAGGGGATTaGGAGCCCCAGGGAGGTGGG +
Preference number: 4 (lower is better)
Translates to: WEQGHTGLLPTERPLTWSDGKGD*EPQGGG
Trigger: CCCACCTCCCTGGGGCTCCCAATCCCCTTTGCCATC...GGACCAGGTCAAGGGACGTTCTGTGGGCAGTAGCCCTGTGTGGCCCTGTTCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000483868.5
ENST00000489960.5
ENST00000648957.1
CDS-3UTR CCA 90 bp GGAGCCCCAGGGAGGTGGGGCCTCCAGACTCATGGTGGGAACAGGGCCACACAGCAACCTTGCCAAGCATaGCCCTGGAAGGAAAGCCTG +
Preference number: 4 (lower is better)
Translates to: GAPGRWGLQTHGGNRATQQPCQA*PWKESL
Trigger: CAGGCTTTCCTTCCAGGGCCATGCTTGGCAAGGTTG...CTGTGTGGCCCTGTTCCCACCATGAGTCTGGAGGCCCCACCTCCCTGGGGCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000483868.5
ENST00000489960.5
ENST00000648957.1
CDS-3UTR CCA 90 bp GATTGGGAGCCCCAGGGAGGTGGGGCCTCCAGACTCATGGTGGGAACAGGGCCAGACTGCTCTCTTCAGTaGCCTTTGGGAGGGCTCCTG +
Preference number: 4 (lower is better)
Translates to: DWEPQGGGASRLMVGTGPDCSLQ*PLGGLL
Trigger: CAGGAGCCCTCCCAAAGGCCACTGAAGAGAGCAGTC...TGGCCCTGTTCCCACCATGAGTCTGGAGGCCCCACCTCCCTGGGGCTCCCAATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648957.1
CDS-3UTR TCA 90 bp GCGCTCGCTGTCTGTGCTGTTGATGCTGCCAGTGTGGCAGGGCATGGAAGCGATACCGGCTCCGTGGAATaGGGGCTAGGCAGGAAAGGC +
Preference number: 4 (lower is better)
Translates to: ALAVCAVDAASVAGHGSDTGSVE*GLGRKG
Trigger: GCCTTTCCTGCCTAGCCCTCATTCCACGGAGCCGGT...ATCGCTTCCATGCCCTGCCACACTGGCAGCATCAACAGCACAGACAGCGAGCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296210.11
ENST00000393400.6
ENST00000483868.5
CDS-3UTR TCA 90 bp CCACACAGGGCTACTGCCCACAGAACGTCCCTTGACCTGGTCCTCCTCCCCTGGAGCGATGAGGCACACTaGTGTTTGGTGCCAGGGGTG +
Preference number: 4 (lower is better)
Translates to: PHRATAHRTSLDLVLLPWSDEAH*CLVPGV
Trigger: CACCCCTGGCACCAAACATCAGTGTGCCTCATCGCT...CCAGGGGAGGAGGACCAGGTCAAGGGACGTTCTGTGGGCAGTAGCCCTGTGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000483868.5
ENST00000489960.5
ENST00000648957.1
CDS-3UTR TCA 90 bp GGAGCCCCAGGGAGGTGGGGCCTCCAGACTCATGGTGGGAACAGGGCCACACAGTCCAGAGCAGGAAGATaGGGAAGAGCACATTGGGGA +
Preference number: 4 (lower is better)
Translates to: GAPGRWGLQTHGGNRATQSRAGR*GRAHWG
Trigger: TCCCCAATGTGCTCTTCCTCATCTTCCTGCTCTGGA...CTGTGTGGCCCTGTTCCCACCATGAGTCTGGAGGCCCCACCTCCCTGGGGCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000483868.5
ENST00000489960.5
ENST00000648957.1
CDS-3UTR TCA 90 bp GGGATTGGGAGCCCCAGGGAGGTGGGGCCTCCAGACTCATGGTGGGAACAGGGCTCCAGAGCAGGAAGATaGGGAAGAGCACATTGGGGA +
Preference number: 4 (lower is better)
Translates to: GIGSPREVGPPDSWWEQGSRAGR*GRAHWG
Trigger: TCCCCAATGTGCTCTTCCTCATCTTCCTGCTCTGGA...GCCCTGTTCCCACCATGAGTCTGGAGGCCCCACCTCCCTGGGGCTCCCAATCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000483868.5
ENST00000489960.5
ENST00000648957.1
CDS-3UTR TCA 90 bp GATTGGGAGCCCCAGGGAGGTGGGGCCTCCAGACTCATGGTGGGAACAGGGCCAGCGGAGCGAAGAAGCTaGAGTACAGGAAGGTTGTGG +
Preference number: 4 (lower is better)
Translates to: DWEPQGGGASRLMVGTGPAERRS*STGRLW
Trigger: CCACAACCTTCCTGTACTTCAGCTTCTTCGCTCCGC...TGGCCCTGTTCCCACCATGAGTCTGGAGGCCCCACCTCCCTGGGGCTCCCAATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000483868.5
ENST00000489960.5
ENST00000648957.1
CDS-3UTR TCA 90 bp TGGGAACAGGGCCACACAGGGCTACTGCCCACAGAACGTCCCTTGACCTGGTCCCGCTGTCTGTGCTGTTaGTGCTGCCAGTGTGGCAGG +
Preference number: 4 (lower is better)
Translates to: WEQGHTGLLPTERPLTWSRCLCC*CCQCGR
Trigger: CCTGCCACACTGGCAGCATCAACAGCACAGACAGCG...GGACCAGGTCAAGGGACGTTCTGTGGGCAGTAGCCCTGTGTGGCCCTGTTCCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000483868.5
ENST00000489960.5
ENST00000648957.1
CDS-3UTR TCA 90 bp TGCCCTCAGGCATTGATGGCCTTCCAGCGCTCGCTGTCTGTGCTGTTGATGCTGGCTGCCCTCAGGCATTaGTGGCCTTCCAGCGCTCGC +
Preference number: 4 (lower is better)
Translates to: CPQALMAFQRSLSVLLMLAALRH*WPSSAR
Trigger: GCGAGCGCTGGAAGGCCATCAATGCCTGAGGGCAGC...CAGCATCAACAGCACAGACAGCGAGCGCTGGAAGGCCATCAATGCCTGAGGGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296210.11
ENST00000393400.6
ENST00000483868.5
CDS-3UTR TCA 90 bp TGGCAGCTGCCCTCAGGCATTGATGGCCTTCCAGCGCTCGCTGTCTGTGCTGTTCCACAGAACGTCCCTTaGCCTGGTCCTCCTCCCCTG +
Preference number: 4 (lower is better)
Translates to: WQLPSGIDGLPALAVCAVPQNVP*PGPPPL
Trigger: CAGGGGAGGAGGACCAGGTCAAGGGACGTTCTGTGG...AACAGCACAGACAGCGAGCGCTGGAAGGCCATCAATGCCTGAGGGCAGCTGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296210.11
ENST00000393400.6
ENST00000483868.5
CDS-3UTR TCA 90 bp GGCCCTGGAAGGAAAGCCTGGGCCATGTCACTGAGCAGTATGAGAGCAGGTGGGCCACAGAACGTCCCTTaGCCTGGTCCTCCTCCCCTG +
Preference number: 4 (lower is better)
Translates to: GPGRKAWAMSLSSMRAGGPQNVP*PGPPPL
Trigger: CAGGGGAGGAGGACCAGGTCAAGGGACGTTCTGTGG...CCCACCTGCTCTCATACTGCTCAGTGACATGGCCCAGGCTTTCCTTCCAGGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000483868.5
ENST00000489960.5
ENST00000648957.1
CDS-3UTR TCA 90 bp GGCCACACAGGGCTACTGCCCACAGAACGTCCCTTGACCTGGTCCTCCTCCCCTAGCAGAGCCCCTCGATaGTGTCGAAGCACAGCAGCA +
Preference number: 4 (lower is better)
Translates to: GHTGLLPTERPLTWSSSPSRAPR*CRSTAA
Trigger: TGCTGCTGTGCTTCGACATCATCGAGGGGCTCTGCT...AGGGGAGGAGGACCAGGTCAAGGGACGTTCTGTGGGCAGTAGCCCTGTGTGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000489960.5
ENST00000648957.1
CDS-3UTR TCA 90 bp GATTGGGAGCCCCAGGGAGGTGGGGCCTCCAGACTCATGGTGGGAACAGGGCCAACAACAGTGTGTGTCTaGCAAAGGGAGAGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: DWEPQGGGASRLMVGTGPTTVCV*QRERGW
Trigger: CCAGCCCCTCTCCCTTTGTCAGACACACACTGTTGT...TGGCCCTGTTCCCACCATGAGTCTGGAGGCCCCACCTCCCTGGGGCTCCCAATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355552.8
ENST00000648957.1
CDS-3UTR TCA 90 bp GGCCACACAGGGCTACTGCCCACAGAACGTCCCTTGACCTGGTCCTCCTCCCCTCTGTCCCAGGCTGCCTaGGTGTCCTCAAGACATGGA +
Preference number: 4 (lower is better)
Translates to: GHTGLLPTERPLTWSSSPLSQAA*VSSRHG
Trigger: TCCATGTCTTGAGGACACTCAGGCAGCCTGGGACAG...AGGGGAGGAGGACCAGGTCAAGGGACGTTCTGTGGGCAGTAGCCCTGTGTGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648957.1
CDS-3UTR GCA 90 bp GGGATTGGGAGCCCCAGGGAGGTGGGGCCTCCAGACTCATGGTGGGAACAGGGCTTGCAGCGTTCGAGGTaGTCACCGTCATGGATACCA +
Preference number: 4 (lower is better)
Translates to: GIGSPREVGPPDSWWEQGLQRSR*SPSWIP
Trigger: TGGTATCCATGACGGTGAGCACCTCGAACGCTGCAA...GCCCTGTTCCCACCATGAGTCTGGAGGCCCCACCTCCCTGGGGCTCCCAATCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000483868.5
ENST00000489960.5
ENST00000648957.1
CDS-3UTR GCA 90 bp TCCAGACTCATGGTGGGAACAGGGCCACACAGGGCTACTGCCCACAGAACGTCCCCAGCCCTGCCCTCGTaGCAAGGGTGCAGAGAAGGA +
Preference number: 4 (lower is better)
Translates to: SRLMVGTGPHRATAHRTSPALPS*QGCREG
Trigger: TCCTTCTCTGCACCCTTGGCACGAGGGCAGGGCTGG...GGACGTTCTGTGGGCAGTAGCCCTGTGTGGCCCTGTTCCCACCATGAGTCTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000483868.5
ENST00000489960.5
ENST00000648957.1
CDS-3UTR GCA 90 bp GACTCATGGTGGGAACAGGGCCACACAGGGCTACTGCCCACAGAACGTCCCTTGCCAGCCCTGCCCTCGTaGCAAGGGTGCAGAGAAGGA +
Preference number: 4 (lower is better)
Translates to: DSWWEQGHTGLLPTERPLPALPS*QGCREG
Trigger: TCCTTCTCTGCACCCTTGGCACGAGGGCAGGGCTGG...CAAGGGACGTTCTGTGGGCAGTAGCCCTGTGTGGCCCTGTTCCCACCATGAGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000483868.5
ENST00000489960.5
ENST00000648957.1
CDS-3UTR GCA 90 bp GCGCTCGCTGTCTGTGCTGTTGATGCTGCCAGTGTGGCAGGGCATGGAAGCGATCCAGCCCTGCCCTCGTaGCAAGGGTGCAGAGAAGGA +
Preference number: 4 (lower is better)
Translates to: ALAVCAVDAASVAGHGSDPALPS*QGCREG
Trigger: TCCTTCTCTGCACCCTTGGCACGAGGGCAGGGCTGG...ATCGCTTCCATGCCCTGCCACACTGGCAGCATCAACAGCACAGACAGCGAGCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296210.11
ENST00000393400.6
ENST00000483868.5
CDS-3UTR GCA 90 bp CCACACAGGGCTACTGCCCACAGAACGTCCCTTGACCTGGTCCTCCTCCCCTGGTTGGGCACTGGGGACTaGTCCTTGGTTGAGCAGAGG +
Preference number: 4 (lower is better)
Translates to: PHRATAHRTSLDLVLLPWLGTGD*SLVEQR
Trigger: CCTCTGCTCAACCAAGGAGCAGTCCCCAGTGCCCAA...CCAGGGGAGGAGGACCAGGTCAAGGGACGTTCTGTGGGCAGTAGCCCTGTGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355552.8
ENST00000648957.1
CDS-3UTR GCA 90 bp GAAGCATGCAGTTGGCTGTGTCCTGGATGGGCTCCTCCTCTCCAACTCTGGGGACCCTGCAGTACCCCCTaGAGCCCAGGAGTCCAGCTC +
Preference number: 4 (lower is better)
Translates to: EACSWLCPGWAPPLQLWGPCSTP*SPGVQL
Trigger: GAGCTGGACTCCTGGGCTGCAGGGGGTACTGCAGGG...TCCCCAGAGTTGGAGAGGAGGAGCCCATCCAGGACACAGCCAACTGCATGCTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355552.8
ENST00000648957.1
CDS-3UTR GCA 90 bp CCACACAGGGCTACTGCCCACAGAACGTCCCTTGACCTGGTCCTCCTCCCCTGGGGCCCCGATAAAGTATaGCATTCAGGGGCACCCTGC +
Preference number: 4 (lower is better)
Translates to: PHRATAHRTSLDLVLLPWGPDKV*HSGAPC
Trigger: GCAGGGTGCCCCTGAATGGCATACTTTATCGGGGCC...CCAGGGGAGGAGGACCAGGTCAAGGGACGTTCTGTGGGCAGTAGCCCTGTGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000355552.8
ENST00000648957.1
CDS-3UTR GCA 90 bp GGAGCCCCAGGGAGGTGGGGCCTCCAGACTCATGGTGGGAACAGGGCCACACAGCTGTTGATGCCTCTCTaGTCATTCACTGCAGCCAGC +
Preference number: 4 (lower is better)
Translates to: GAPGRWGLQTHGGNRATQLLMPL*SFTAAS
Trigger: GCTGGCTGCAGTGAATGAGCAGAGAGGCATCAACAG...CTGTGTGGCCCTGTTCCCACCATGAGTCTGGAGGCCCCACCTCCCTGGGGCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355552.8
ENST00000648957.1
CDS-3UTR GCA 90 bp TCCAGCTCACTGGCCGTACTGTTGGCCCTGTCCGCTATCAACCCTCCAGGCCCTTGCCCCAGCGCTGGATaGCTACTGACCTGGGAAGAG +
Preference number: 4 (lower is better)
Translates to: SSSLAVLLALSAINPPGPCPSAG*LLTWEE
Trigger: CTCTTCCCAGGTCAGTAGGCATCCAGCGCTGGGGCA...AGGGCCTGGAGGGTTGATAGCGGACAGGGCCAACAGTACGGCCAGTGAGCTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648957.1
CDS-3UTR CCA 90 bp TGGGAACAGGGCCACACAGGGCTACTGCCCACAGAACGTCCCTTGACCTGGTCCAGGTGCTCACCGTCATaGATACCACGGCCCGGGCAA +
Preference number: 4 (lower is better)
Translates to: WEQGHTGLLPTERPLTWSRCSPS*IPRPGQ
Trigger: TTGCCCGGGCCGTGGTATCCATGACGGTGAGCACCT...GGACCAGGTCAAGGGACGTTCTGTGGGCAGTAGCCCTGTGTGGCCCTGTTCCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000483868.5
ENST00000489960.5
ENST00000648957.1
CDS-3UTR CCA 90 bp AGGCCCTGGCAGCTGCCCTCAGGCATTGATGGCCTTCCAGCGCTCGCTGTCTGTTCACACTCAGCTCGATaGCCAGCAGGAAGAAGCGGG +
Preference number: 4 (lower is better)
Translates to: RPWQLPSGIDGLPALAVCSHSAR*PAGRSG
Trigger: CCCGCTTCTTCCTGCTGGCCATCGAGCTGAGTGTGA...ACAGACAGCGAGCGCTGGAAGGCCATCAATGCCTGAGGGCAGCTGCCAGGGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296210.11
ENST00000393400.6
ENST00000483868.5
CDS-3UTR CCA 90 bp TGCTGCCAGTGTGGCAGGGCATGGAAGCGATGTCATCCAGGTAGGCCACCCCGCTCACACTCAGCTCGATaGCCAGCAGGAAGAAGCGGG +
Preference number: 4 (lower is better)
Translates to: CCQCGRAWKRCHPGRPPRSHSAR*PAGRSG
Trigger: CCCGCTTCTTCCTGCTGGCCATCGAGCTGAGTGTGA...GCGGGGTGGCCTACCTGGATGACATCGCTTCCATGCCCTGCCACACTGGCAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393400.6
ENST00000483868.5
CDS-3UTR CCA 90 bp CCAGCGCTCGCTGTCTGTGCTGTTGATGCTGCCAGTGTGGCAGGGCATGGAAGCGACTTACTCTCCAGGTaGCCAAAGGCCAGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: PALAVCAVDAASVAGHGSDLLSR*PKARPR
Trigger: CCTGGGCCTGGCCTTTGGCCACCTGGAGAGTAAGTC...GCTTCCATGCCCTGCCACACTGGCAGCATCAACAGCACAGACAGCGAGCGCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296210.11
ENST00000393400.6
ENST00000483868.5
CDS-3UTR CCA 90 bp GGAAGGAAAGCCTGGGCCATGTCACTGAGCAGTATGAGAGCAGGTGGGAAGGGGGCGTGCTCGAGTAGCTaGCAGCTGAGGCCCCAGCAG +
Preference number: 4 (lower is better)
Translates to: GRKAWAMSLSSMRAGGKGACSSS*QLRPQQ
Trigger: CTGCTGGGGCCTCAGCTGCCAGCTACTCGAGCACGC...CCCCTTCCCACCTGCTCTCATACTGCTCAGTGACATGGCCCAGGCTTTCCTTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000483868.5
ENST00000489960.5
ENST00000648957.1
CDS-3UTR CCA 90 bp GCCGAAGAAGCCCCGGAGGAAAGCCACGTAGATGAGCGGAGCGAAGAAGCTGAAGGACTCTGGGCCTGCTaGCCTCCTCTCTGGCCTGTC +
Preference number: 4 (lower is better)
Translates to: AEEAPEESHVDERSEEAEGLWAC*PPLWPV
Trigger: GACAGGCCAGAGAGGAGGCCAGCAGGCCCAGAGTCC...TTCAGCTTCTTCGCTCCGCTCATCTACGTGGCTTTCCTCCGGGGCTTCTTCGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393400.6
ENST00000483868.5
CDS-3UTR CCA 90 bp AGCCTGGGCCATGTCACTGAGCAGTATGAGAGCAGGTGGGAAGGGGAGGAGGGTGAACGTCCCTTGACCTaGTCCTCCTCCCCTGGGGAC +
Preference number: 4 (lower is better)
Translates to: SLGHVTEQYESRWEGEEGERPLT*SSSPGD
Trigger: GTCCCCAGGGGAGGAGGACCAGGTCAAGGGACGTTC...ACCCTCCTCCCCTTCCCACCTGCTCTCATACTGCTCAGTGACATGGCCCAGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000483868.5
ENST00000489960.5
ENST00000648957.1
CDS-3UTR CCA 90 bp GGAAGGAAAGCCTGGGCCATGTCACTGAGCAGTATGAGAGCAGGTGGGAAGGGGGGAGCCCCAGGGAGGTaGGGCCTCCAGACTCATGGT +
Preference number: 4 (lower is better)
Translates to: GRKAWAMSLSSMRAGGKGGAPGR*GLQTHG
Trigger: ACCATGAGTCTGGAGGCCCCACCTCCCTGGGGCTCC...CCCCTTCCCACCTGCTCTCATACTGCTCAGTGACATGGCCCAGGCTTTCCTTCC
62% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000483868.5
ENST00000489960.5
ENST00000648957.1
CDS-3UTR CCA 90 bp CCAGCGCTCGCTGTCTGTGCTGTTGATGCTGCCAGTGTGGCAGGGCATGGAAGCCAGTATGAGAGCAGGTaGGAAGGGGAGGAGGGTCCC +
Preference number: 4 (lower is better)
Translates to: PALAVCAVDAASVAGHGSQYESR*EGEEGP
Trigger: GGGACCCTCCTCCCCTTCCCACCTGCTCTCATACTG...GCTTCCATGCCCTGCCACACTGGCAGCATCAACAGCACAGACAGCGAGCGCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296210.11
ENST00000393400.6
ENST00000483868.5
CDS-3UTR CCA 90 bp GATTGGGAGCCCCAGGGAGGTGGGGCCTCCAGACTCATGGTGGGAACAGGGCCACAACCTTGCCAAGCATaGCCCTGGAAGGAAAGCCTG +
Preference number: 4 (lower is better)
Translates to: DWEPQGGGASRLMVGTGPQPCQA*PWKESL
Trigger: CAGGCTTTCCTTCCAGGGCCATGCTTGGCAAGGTTG...TGGCCCTGTTCCCACCATGAGTCTGGAGGCCCCACCTCCCTGGGGCTCCCAATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000483868.5
ENST00000489960.5
ENST00000648957.1
CDS-3UTR CCA 90 bp CCACACAGGGCTACTGCCCACAGAACGTCCCTTGACCTGGTCCTCCTCCCCTGGTGGCTGTGTCCTGGATaGGCTCCTCCTCTCCAACTC +
Preference number: 4 (lower is better)
Translates to: PHRATAHRTSLDLVLLPWWLCPG*APPLQL
Trigger: GAGTTGGAGAGGAGGAGCCCATCCAGGACACAGCCA...CCAGGGGAGGAGGACCAGGTCAAGGGACGTTCTGTGGGCAGTAGCCCTGTGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355552.8
ENST00000648957.1
CDS-3UTR CCA 90 bp GATTGGGAGCCCCAGGGAGGTGGGGCCTCCAGACTCATGGTGGGAACAGGGCCAAGACATGAGCTGTGTTaGAGCTTGTGCCCTCGGCAC +
Preference number: 4 (lower is better)
Translates to: DWEPQGGGASRLMVGTGPRHELC*SLCPRH
Trigger: GTGCCGAGGGCACAAGCTCCAACACAGCTCATGTCT...TGGCCCTGTTCCCACCATGAGTCTGGAGGCCCCACCTCCCTGGGGCTCCCAATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355552.8
ENST00000648957.1
CDS-3UTR CCA 90 bp TGGGAACAGGGCCACACAGGGCTACTGCCCACAGAACGTCCCTTGACCTGGTCCCACTGCAGCTCAGTGTaGGGCTCCACACAGGTCACG +
Preference number: 4 (lower is better)
Translates to: WEQGHTGLLPTERPLTWSHCSSV*GSTQVT
Trigger: CGTGACCTGTGTGGAGCCCCACACTGAGCTGCAGTG...GGACCAGGTCAAGGGACGTTCTGTGGGCAGTAGCCCTGTGTGGCCCTGTTCCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450633.6
CDS-3UTR CCA 90 bp GCTCACTGGCCGTACTGTTGGCCCTGTCCGCTATCAACCCTCCAGGCCCTCCCAAGCATGACTGTTGGCTaGGGTCCCAGCTCCTCACTC +
Preference number: 4 (lower is better)
Translates to: AHWPYCWPCPLSTLQALPSMTVG*GPSSSL
Trigger: GAGTGAGGAGCTGGGACCCCAGCCAACAGTCATGCT...TGGGAGGGCCTGGAGGGTTGATAGCGGACAGGGCCAACAGTACGGCCAGTGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648957.1
CDS-3UTR CCA 90 bp GATTGGGAGCCCCAGGGAGGTGGGGCCTCCAGACTCATGGTGGGAACAGGGCCAGGATGCCTACTGACCTaGGAAGAGCAAACCCCAAGG +
Preference number: 4 (lower is better)
Translates to: DWEPQGGGASRLMVGTGPGCLLT*EEQTPR
Trigger: CCTTGGGGTTTGCTCTTCCCAGGTCAGTAGGCATCC...TGGCCCTGTTCCCACCATGAGTCTGGAGGCCCCACCTCCCTGGGGCTCCCAATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000648957.1
CDS-3UTR TCA 90 bp AGCCTGGGCCATGTCACTGAGCAGTATGAGAGCAGGTGGGAAGGGGAGGAGGGTAAATGGGGCTGGAGGTaGTGCGGATCTTCGCCCGAG +
Preference number: 4 (lower is better)
Translates to: SLGHVTEQYESRWEGEEGKWGWR*CGSSPE
Trigger: CTCGGGCGAAGATCCGCATCACCTCCAGCCCCATTT...ACCCTCCTCCCCTTCCCACCTGCTCTCATACTGCTCAGTGACATGGCCCAGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000483868.5
ENST00000489960.5
ENST00000648957.1
CDS-3UTR TCA 90 bp AGCCTGGGCCATGTCACTGAGCAGTATGAGAGCAGGTGGGAAGGGGAGGAGGGTCGCTGTCTGTGCTGTTaGTGCTGCCAGTGTGGCAGG +
Preference number: 4 (lower is better)
Translates to: SLGHVTEQYESRWEGEEGRCLCC*CCQCGR
Trigger: CCTGCCACACTGGCAGCATCAACAGCACAGACAGCG...ACCCTCCTCCCCTTCCCACCTGCTCTCATACTGCTCAGTGACATGGCCCAGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000483868.5
ENST00000489960.5
ENST00000648957.1
CDS-3UTR TCA 90 bp GGAAGGAAAGCCTGGGCCATGTCACTGAGCAGTATGAGAGCAGGTGGGAAGGGGCCACAGAACGTCCCTTaGCCTGGTCCTCCTCCCCTG +
Preference number: 4 (lower is better)
Translates to: GRKAWAMSLSSMRAGGKGPQNVP*PGPPPL
Trigger: CAGGGGAGGAGGACCAGGTCAAGGGACGTTCTGTGG...CCCCTTCCCACCTGCTCTCATACTGCTCAGTGACATGGCCCAGGCTTTCCTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000483868.5
ENST00000489960.5
ENST00000648957.1
CDS-3UTR TCA 90 bp AGGCCCTGGCAGCTGCCCTCAGGCATTGATGGCCTTCCAGCGCTCGCTGTCTGTCCATGGTGGATGCTTTaGGGAGGCCAAAGCACCATG +
Preference number: 4 (lower is better)
Translates to: RPWQLPSGIDGLPALAVCPWWML*GGQSTM
Trigger: CATGGTGCTTTGGCCTCCTCAAAGCATCCACCATGG...ACAGACAGCGAGCGCTGGAAGGCCATCAATGCCTGAGGGCAGCTGCCAGGGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296210.11
ENST00000393400.6
ENST00000483868.5
CDS-3UTR TCA 90 bp GCTCACTGGCCGTACTGTTGGCCCTGTCCGCTATCAACCCTCCAGGCCCTCCCAGGGTCTTGGGAAGGATaGCCACCAGAGAGTAGACCA +
Preference number: 4 (lower is better)
Translates to: AHWPYCWPCPLSTLQALPGSWEG*PPESRP
Trigger: TGGTCTACTCTCTGGTGGTCATCCTTCCCAAGACCC...TGGGAGGGCCTGGAGGGTTGATAGCGGACAGGGCCAACAGTACGGCCAGTGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355552.8
ENST00000648957.1
CDS-3UTR TCA 90 bp GCTCACTGGCCGTACTGTTGGCCCTGTCCGCTATCAACCCTCCAGGCCCTCCCAACAACAGTGTGTGTCTaGCAAAGGGAGAGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: AHWPYCWPCPLSTLQALPTTVCV*QRERGW
Trigger: CCAGCCCCTCTCCCTTTGTCAGACACACACTGTTGT...TGGGAGGGCCTGGAGGGTTGATAGCGGACAGGGCCAACAGTACGGCCAGTGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355552.8
ENST00000648957.1
CDS-3UTR TCA 90 bp CCTTACCCCGCTCACTCAGAATGCCGTGAGCTTGCCTTCCCTGATTACCAGGCTAGGCGGGCAACAGCCTaGTCCTCAGGGTCCCCACAG +
Preference number: 4 (lower is better)
Translates to: PYPAHSECRELAFPDYQARRATA*SSGSPQ
Trigger: CTGTGGGGACCCTGAGGATCAGGCTGTTGCCCGCCT...AGCCTGGTAATCAGGGAAGGCAAGCTCACGGCATTCTGAGTGAGCGGGGTAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355552.8
ENST00000648957.1
CDS-3UTR TCA 90 bp CCAACCCTTACCCCGCTCACTCAGAATGCCGTGAGCTTGCCTTCCCTGATTACCCCCTCCCAGGGAGCCTaGCACATTGGCCCCACAGAC +
Preference number: 4 (lower is better)
Translates to: PTLTPLTQNAVSLPSLITPSQGA*HIGPTD
Trigger: GTCTGTGGGGCCAATGTGTCAGGCTCCCTGGGAGGG...GGTAATCAGGGAAGGCAAGCTCACGGCATTCTGAGTGAGCGGGGTAAGGGTTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000355552.8
ENST00000648957.1
CDS-3UTR TCA 90 bp CCTTACCCCGCTCACTCAGAATGCCGTGAGCTTGCCTTCCCTGATTACCAGGCTCCCTCCCAGGGAGCCTaGCACATTGGCCCCACAGAC +
Preference number: 4 (lower is better)
Translates to: PYPAHSECRELAFPDYQAPSQGA*HIGPTD
Trigger: GTCTGTGGGGCCAATGTGTCAGGCTCCCTGGGAGGG...AGCCTGGTAATCAGGGAAGGCAAGCTCACGGCATTCTGAGTGAGCGGGGTAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355552.8
ENST00000648957.1
CDS-3UTR TCA 90 bp GGCCACACAGGGCTACTGCCCACAGAACGTCCCTTGACCTGGTCCTCCTCCCCTCCAGCAAACTTCGGCTaGCACTGTGCCATCTTGGAC +
Preference number: 4 (lower is better)
Translates to: GHTGLLPTERPLTWSSSPPANFG*HCAILD
Trigger: GTCCAAGATGGCACAGTGTCAGCCGAAGTTTGCTGG...AGGGGAGGAGGACCAGGTCAAGGGACGTTCTGTGGGCAGTAGCCCTGTGTGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355552.8
ENST00000648957.1
CDS-3UTR TCA 90 bp GGAAGGAAAGCCTGGGCCATGTCACTGAGCAGTATGAGAGCAGGTGGGAAGGGGCGAAGACTGGAAAGCTaGGGACGCGCCACCTCTCGC +
Preference number: 4 (lower is better)
Translates to: GRKAWAMSLSSMRAGGKGRRLES*GRATSR
Trigger: GCGAGAGGTGGCGCGTCCTCAGCTTTCCAGTCTTCG...CCCCTTCCCACCTGCTCTCATACTGCTCAGTGACATGGCCCAGGCTTTCCTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489960.5
CDS-3UTR GCA 90 bp AGCCTGGGCCATGTCACTGAGCAGTATGAGAGCAGGTGGGAAGGGGAGGAGGGTGTGGGGGTAGCGCTGTaGTCCCATTGGCCCAAGTCA +
Preference number: 4 (lower is better)
Translates to: SLGHVTEQYESRWEGEEGVGVAL*SHWPKS
Trigger: TGACTTGGGCCAATGGGAGCACAGCGCTACCCCCAC...ACCCTCCTCCCCTTCCCACCTGCTCTCATACTGCTCAGTGACATGGCCCAGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000483868.5
ENST00000489960.5
ENST00000648957.1
CDS-3UTR GCA 90 bp CCACACAGGGCTACTGCCCACAGAACGTCCCTTGACCTGGTCCTCCTCCCCTGGACCGGACCCTGGAGGTaGCAATGTCTTCGTAGAGCA +
Preference number: 4 (lower is better)
Translates to: PHRATAHRTSLDLVLLPWTGPWR*QCLRRA
Trigger: TGCTCTACGAAGACATTGGCACCTCCAGGGTCCGGT...CCAGGGGAGGAGGACCAGGTCAAGGGACGTTCTGTGGGCAGTAGCCCTGTGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000483868.5
ENST00000489960.5
ENST00000648957.1
CDS-3UTR GCA 90 bp GATTGGGAGCCCCAGGGAGGTGGGGCCTCCAGACTCATGGTGGGAACAGGGCCATTGCAGCGTTCGAGGTaGTCACCGTCATGGATACCA +
Preference number: 4 (lower is better)
Translates to: DWEPQGGGASRLMVGTGPLQRSR*SPSWIP
Trigger: TGGTATCCATGACGGTGAGCACCTCGAACGCTGCAA...TGGCCCTGTTCCCACCATGAGTCTGGAGGCCCCACCTCCCTGGGGCTCCCAATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000483868.5
ENST00000489960.5
ENST00000648957.1
CDS-3UTR GCA 90 bp TGGGAACAGGGCCACACAGGGCTACTGCCCACAGAACGTCCCTTGACCTGGTCCTGCAGAGAAGGAGGGTaGCCTCAGCCAACCTTGCCA +
Preference number: 4 (lower is better)
Translates to: WEQGHTGLLPTERPLTWSCREGG*PQPTLP
Trigger: TGGCAAGGTTGGCTGAGGGCACCCTCCTTCTCTGCA...GGACCAGGTCAAGGGACGTTCTGTGGGCAGTAGCCCTGTGTGGCCCTGTTCCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000483868.5
ENST00000489960.5
ENST00000648957.1
CDS-3UTR GCA 90 bp CATTGGCCCCACAGACATGAGCTGTGTTGGAGCTTGTGCCCTCGGCACCCCATTCCCTCGTGCCAAGGGTaGAGAGAAGGAGGGTGCCCT +
Preference number: 4 (lower is better)
Translates to: HWPHRHELCWSLCPRHPIPSCQG*REGGCP
Trigger: AGGGCACCCTCCTTCTCTGCACCCTTGGCACGAGGG...AATGGGGTGCCGAGGGCACAAGCTCCAACACAGCTCATGTCTGTGGGGCCAATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355552.8
ENST00000648957.1
CDS-3UTR GCA 90 bp AGGCCACCCCGCCGGCAGAGTCGAACTGCGTGCTCGAGTAGCTGGCAGCTGAGGATCCACCATGGTGGATaGTTTGAGGAGGCCAAAGCA +
Preference number: 4 (lower is better)
Translates to: RPPRRQSRTACSSSWQLRIHHGG*FEEAKA
Trigger: TGCTTTGGCCTCCTCAAAGCATCCACCATGGTGGAT...CCTCAGCTGCCAGCTACTCGAGCACGCAGTTCGACTCTGCCGGCGGGGTGGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393400.6
CDS-3UTR GCA 90 bp GGCCCTGGAAGGAAAGCCTGGGCCATGTCACTGAGCAGTATGAGAGCAGGTGGGGAGAAGGCAGGGAGATaGGCTCCTTCAGCGGGGTCT +
Preference number: 4 (lower is better)
Translates to: GPGRKAWAMSLSSMRAGGEKAGR*APSAGS
Trigger: AGACCCCGCTGAAGGAGCGCATCTCCCTGCCTTCTC...CCCACCTGCTCTCATACTGCTCAGTGACATGGCCCAGGCTTTCCTTCCAGGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355552.8
ENST00000450633.6
ENST00000489960.5
ENST00000648957.1
CDS-3UTR GCA 90 bp GGGAGAGCCAGCCCTGCCCTCGTGCCAAGGGTGCAGAGAAGGAGGGTGCCCTCACCCTTTCACTCTGGCTaGCAAAAAGCTCAAAGCCGA +
Preference number: 4 (lower is better)
Translates to: GRASPALVPRVQRRRVPSPFHSG*QKAQSR
Trigger: TCGGCTTTGAGCTTTTTGGCAGCCAGAGTGAAAGGG...TGAGGGCACCCTCCTTCTCTGCACCCTTGGCACGAGGGCAGGGCTGGCTCTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355552.8
ENST00000648957.1
CDS-3UTR GCA 90 bp TGGCCCCACAGACATGAGCTGTGTTGGAGCTTGTGCCCTCGGCACCCCATTCCCCCCGCTCACTCAGAATaGCGTGAGCTTGCCTTCCCT +
Preference number: 4 (lower is better)
Translates to: WPHRHELCWSLCPRHPIPPAHSE*RELAFP
Trigger: AGGGAAGGCAAGCTCACGGCATTCTGAGTGAGCGGG...GGGAATGGGGTGCCGAGGGCACAAGCTCCAACACAGCTCATGTCTGTGGGGCCA
61% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000355552.8
ENST00000648957.1
CDS-3UTR GCA 90 bp GCGCTCGCTGTCTGTGCTGTTGATGCTGCCAGTGTGGCAGGGCATGGAAGCGATCAGAAGGCAGGGAGATaGGCTCCTTCAGCGGGGTCT +
Preference number: 4 (lower is better)
Translates to: ALAVCAVDAASVAGHGSDQKAGR*APSAGS
Trigger: AGACCCCGCTGAAGGAGCGCATCTCCCTGCCTTCTG...ATCGCTTCCATGCCCTGCCACACTGGCAGCATCAACAGCACAGACAGCGAGCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483868.5
CDS-3UTR CCA 90 bp ATCTGGCTCCTCTGTCTCGTCCACTTGGCATTTGTAGGAGAAGAGGATCTTGGGCCAGACCAGGCGGCCTaGGCCGGGAAGCGTCGCGCA +
Preference number: 4 (lower is better)
Translates to: IWLLCLVHLAFVGEEDLGPDQAA*AGKRRA
Trigger: TGCGCGACGCTTCCCGGCCCAGGCCGCCTGGTCTGG...CCCAAGATCCTCTTCTCCTACAAATGCCAAGTGGACGAGACAGAGGAGCCAGAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393400.6
ENST00000483868.5
CDS-3UTR CCA 90 bp GGCCCTGGAAGGAAAGCCTGGGCCATGTCACTGAGCAGTATGAGAGCAGGTGGGAGGTGCTCACCGTCATaGATACCACGGCCCGGGCAA +
Preference number: 4 (lower is better)
Translates to: GPGRKAWAMSLSSMRAGGRCSPS*IPRPGQ
Trigger: TTGCCCGGGCCGTGGTATCCATGACGGTGAGCACCT...CCCACCTGCTCTCATACTGCTCAGTGACATGGCCCAGGCTTTCCTTCCAGGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000483868.5
ENST00000489960.5
ENST00000648957.1
CDS-3UTR CCA 90 bp TCCAGACTCATGGTGGGAACAGGGCCACACAGGGCTACTGCCCACAGAACGTCCAGGTGCTCACCGTCATaGATACCACGGCCCGGGCAA +
Preference number: 4 (lower is better)
Translates to: SRLMVGTGPHRATAHRTSRCSPS*IPRPGQ
Trigger: TTGCCCGGGCCGTGGTATCCATGACGGTGAGCACCT...GGACGTTCTGTGGGCAGTAGCCCTGTGTGGCCCTGTTCCCACCATGAGTCTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000483868.5
ENST00000489960.5
ENST00000648957.1
CDS-3UTR CCA 90 bp CCACACAGGGCTACTGCCCACAGAACGTCCCTTGACCTGGTCCTCCTCCCCTGGAGGAGAAGAGGATCTTaGGCTCCGAGCCGAAGAAGC +
Preference number: 4 (lower is better)
Translates to: PHRATAHRTSLDLVLLPWRRRGS*APSRRS
Trigger: GCTTCTTCGGCTCGGAGCCCAAGATCCTCTTCTCCT...CCAGGGGAGGAGGACCAGGTCAAGGGACGTTCTGTGGGCAGTAGCCCTGTGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000483868.5
ENST00000489960.5
ENST00000648957.1
CDS-3UTR CCA 90 bp CCCTGGAAGGAAAGCCTGGGCCATGTCACTGAGCAGTATGAGAGCAGGTGGGAAGCGTGCTCGAGTAGCTaGCAGCTGAGGCCCCAGCAG +
Preference number: 4 (lower is better)
Translates to: PWKESLGHVTEQYESRWEACSSS*QLRPQQ
Trigger: CTGCTGGGGCCTCAGCTGCCAGCTACTCGAGCACGC...TTCCCACCTGCTCTCATACTGCTCAGTGACATGGCCCAGGCTTTCCTTCCAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000483868.5
ENST00000489960.5
ENST00000648957.1
CDS-3UTR CCA 90 bp GGCCACACAGGGCTACTGCCCACAGAACGTCCCTTGACCTGGTCCTCCTCCCCTCAGTGTGGCAGGGCATaGAAGCGATGTCATCCAGGT +
Preference number: 4 (lower is better)
Translates to: GHTGLLPTERPLTWSSSPQCGRA*KRCHPG
Trigger: ACCTGGATGACATCGCTTCCATGCCCTGCCACACTG...AGGGGAGGAGGACCAGGTCAAGGGACGTTCTGTGGGCAGTAGCCCTGTGTGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000483868.5
ENST00000489960.5
ENST00000648957.1
CDS-3UTR CCA 90 bp CCACACAGGGCTACTGCCCACAGAACGTCCCTTGACCTGGTCCTCCTCCCCTGGTTGATGCTGCCAGTGTaGCAGGGCATGGAAGCGATG +
Preference number: 4 (lower is better)
Translates to: PHRATAHRTSLDLVLLPWLMLPV*QGMEAM
Trigger: CATCGCTTCCATGCCCTGCCACACTGGCAGCATCAA...CCAGGGGAGGAGGACCAGGTCAAGGGACGTTCTGTGGGCAGTAGCCCTGTGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000483868.5
ENST00000489960.5
ENST00000648957.1
CDS-3UTR CCA 90 bp CAGGGACAAGTGGGCCCCTCTCCCCTACTCATGCCTTATGATCCCAGTGCTTTGGGACTCTGGGCCTGCTaGCCTCCTCTCTGGCCTGTC +
Preference number: 4 (lower is better)
Translates to: QGQVGPSPLLMPYDPSALGLWAC*PPLWPV
Trigger: GACAGGCCAGAGAGGAGGCCAGCAGGCCCAGAGTCC...CAAAGCACTGGGATCATAAGGCATGAGTAGGGGAGAGGGGCCCACTTGTCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355552.8
ENST00000648957.1
CDS-3UTR CCA 90 bp CCCTGGAAGGAAAGCCTGGGCCATGTCACTGAGCAGTATGAGAGCAGGTGGGAAGGACTCTGGGCCTGCTaGCCTCCTCTCTGGCCTGTC +
Preference number: 4 (lower is better)
Translates to: PWKESLGHVTEQYESRWEGLWAC*PPLWPV
Trigger: GACAGGCCAGAGAGGAGGCCAGCAGGCCCAGAGTCC...TTCCCACCTGCTCTCATACTGCTCAGTGACATGGCCCAGGCTTTCCTTCCAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000483868.5
ENST00000489960.5
ENST00000648957.1
CDS-3UTR CCA 90 bp CTTCAGTCCATCCACCATGGTGGATGCTTTGAGGAGGCCAAAGCACCATGGGGACTGGTCCTCCTCCCCTaGGGACTCTGGGCCTGCTGG +
Preference number: 4 (lower is better)
Translates to: LQSIHHGGCFEEAKAPWGLVLLP*GLWACW
Trigger: CCAGCAGGCCCAGAGTCCCCAGGGGAGGAGGACCAG...TCCCCATGGTGCTTTGGCCTCCTCAAAGCATCCACCATGGTGGATGGACTGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000648957.1
CDS-3UTR CCA 90 bp TGTGAACACAGGATGGCTCTGGAAGGTTATGGAGACCCTGGGTGCTTCAGGAGGCTGGTCCTCCTCCCCTaGGGACTCTGGGCCTGCTGG +
Preference number: 4 (lower is better)
Translates to: CEHRMALEGYGDPGCFRRLVLLP*GLWACW
Trigger: CCAGCAGGCCCAGAGTCCCCAGGGGAGGAGGACCAG...CCTCCTGAAGCACCCAGGGTCTCCATAACCTTCCAGAGCCATCCTGTGTTCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355552.8
ENST00000648957.1
CDS-3UTR CCA 90 bp TGCCCTCAGGCATTGATGGCCTTCCAGCGCTCGCTGTCTGTGCTGTTGATGCTGGAACGTCCCTTGACCTaGTCCTCCTCCCCTGGGGAC +
Preference number: 4 (lower is better)
Translates to: CPQALMAFQRSLSVLLMLERPLT*SSSPGD
Trigger: GTCCCCAGGGGAGGAGGACCAGGTCAAGGGACGTTC...CAGCATCAACAGCACAGACAGCGAGCGCTGGAAGGCCATCAATGCCTGAGGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296210.11
ENST00000393400.6
ENST00000483868.5
CDS-3UTR CCA 90 bp GCGCTCGCTGTCTGTGCTGTTGATGCTGCCAGTGTGGCAGGGCATGGAAGCGATCCTCCAGACTCATGGTaGGAACAGGGCCACACAGGG +
Preference number: 4 (lower is better)
Translates to: ALAVCAVDAASVAGHGSDPPDSW*EQGHTG
Trigger: CCCTGTGTGGCCCTGTTCCCACCATGAGTCTGGAGG...ATCGCTTCCATGCCCTGCCACACTGGCAGCATCAACAGCACAGACAGCGAGCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296210.11
ENST00000393400.6
ENST00000483868.5
CDS-3UTR CCA 90 bp GGCCCTGGAAGGAAAGCCTGGGCCATGTCACTGAGCAGTATGAGAGCAGGTGGGCCTCCAGACTCATGGTaGGAACAGGGCCACACAGGG +
Preference number: 4 (lower is better)
Translates to: GPGRKAWAMSLSSMRAGGPPDSW*EQGHTG
Trigger: CCCTGTGTGGCCCTGTTCCCACCATGAGTCTGGAGG...CCCACCTGCTCTCATACTGCTCAGTGACATGGCCCAGGCTTTCCTTCCAGGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000483868.5
ENST00000489960.5
ENST00000648957.1
CDS-3UTR CCA 90 bp CTCCAGACTCATGGTGGGAACAGGGCCACACAGGGCTACTGCCCACAGAACGTCGGGCCTCCAGACTCATaGTGGGAACAGGGCCACACA +
Preference number: 4 (lower is better)
Translates to: LQTHGGNRATQGYCPQNVGPPDS*WEQGHT
Trigger: TGTGTGGCCCTGTTCCCACCATGAGTCTGGAGGCCC...GACGTTCTGTGGGCAGTAGCCCTGTGTGGCCCTGTTCCCACCATGAGTCTGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000483868.5
ENST00000489960.5
ENST00000648957.1
CDS-3UTR CCA 90 bp GACTCATGGTGGGAACAGGGCCACACAGGGCTACTGCCCACAGAACGTCCCTTGGGGCCTCCAGACTCATaGTGGGAACAGGGCCACACA +
Preference number: 4 (lower is better)
Translates to: DSWWEQGHTGLLPTERPLGPPDS*WEQGHT
Trigger: TGTGTGGCCCTGTTCCCACCATGAGTCTGGAGGCCC...CAAGGGACGTTCTGTGGGCAGTAGCCCTGTGTGGCCCTGTTCCCACCATGAGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000483868.5
ENST00000489960.5
ENST00000648957.1
CDS-3UTR CCA 90 bp AGTCCATCCACCATGGTGGATGCTTTGAGGAGGCCAAAGCACCATGGGGATGGGGGAGCCCCAGGGAGGTaGGGCCTCCAGACTCATGGT +
Preference number: 4 (lower is better)
Translates to: SPSTMVDALRRPKHHGDGGAPGR*GLQTHG
Trigger: ACCATGAGTCTGGAGGCCCCACCTCCCTGGGGCTCC...CCCATCCCCATGGTGCTTTGGCCTCCTCAAAGCATCCACCATGGTGGATGGACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000648957.1
CDS-3UTR CCA 90 bp GGAAGGAAAGCCTGGGCCATGTCACTGAGCAGTATGAGAGCAGGTGGGAAGGGGGATGGCAAAGGGGATTaGGAGCCCCAGGGAGGTGGG +
Preference number: 4 (lower is better)
Translates to: GRKAWAMSLSSMRAGGKGDGKGD*EPQGGG
Trigger: CCCACCTCCCTGGGGCTCCCAATCCCCTTTGCCATC...CCCCTTCCCACCTGCTCTCATACTGCTCAGTGACATGGCCCAGGCTTTCCTTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000483868.5
ENST00000489960.5
ENST00000648957.1
CDS-3UTR CCA 90 bp CTCCAGACTCATGGTGGGAACAGGGCCACACAGGGCTACTGCCCACAGAACGTCCAGTATGAGAGCAGGTaGGAAGGGGAGGAGGGTCCC +
Preference number: 4 (lower is better)
Translates to: LQTHGGNRATQGYCPQNVQYESR*EGEEGP
Trigger: GGGACCCTCCTCCCCTTCCCACCTGCTCTCATACTG...GACGTTCTGTGGGCAGTAGCCCTGTGTGGCCCTGTTCCCACCATGAGTCTGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000483868.5
ENST00000489960.5
ENST00000648957.1
CDS-3UTR CCA 90 bp GTGGGAACAGGGCCACACAGGGCTACTGCCCACAGAACGTCCCTTGACCTGGTCACCATGGGGATGGGATaGAGGCATTGGGAGAGCCAG +
Preference number: 4 (lower is better)
Translates to: VGTGPHRATAHRTSLDLVTMGMG*RHWESQ
Trigger: CTGGCTCTCCCAATGCCTCCATCCCATCCCCATGGT...GACCAGGTCAAGGGACGTTCTGTGGGCAGTAGCCCTGTGTGGCCCTGTTCCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000483868.5
ENST00000489960.5
ENST00000648957.1
CDS-3UTR CCA 90 bp GGCCACACAGGGCTACTGCCCACAGAACGTCCCTTGACCTGGTCCTCCTCCCCTAGACATGAGCTGTGTTaGAGCTTGTGCCCTCGGCAC +
Preference number: 4 (lower is better)
Translates to: GHTGLLPTERPLTWSSSPRHELC*SLCPRH
Trigger: GTGCCGAGGGCACAAGCTCCAACACAGCTCATGTCT...AGGGGAGGAGGACCAGGTCAAGGGACGTTCTGTGGGCAGTAGCCCTGTGTGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355552.8
ENST00000648957.1
CDS-3UTR CCA 90 bp GTGGGAACAGGGCCACACAGGGCTACTGCCCACAGAACGTCCCTTGACCTGGTCCACTGGCCGTACTGTTaGCCCTGTCCGCTATCAACC +
Preference number: 4 (lower is better)
Translates to: VGTGPHRATAHRTSLDLVHWPYC*PCPLST
Trigger: GGTTGATAGCGGACAGGGCCAACAGTACGGCCAGTG...GACCAGGTCAAGGGACGTTCTGTGGGCAGTAGCCCTGTGTGGCCCTGTTCCCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355552.8
ENST00000648957.1
CDS-3UTR CCA 90 bp TCCAGACTCATGGTGGGAACAGGGCCACACAGGGCTACTGCCCACAGAACGTCCTGTCGTCGGGTCCCCTaGAGCCTCAGCTTCTACCTC +
Preference number: 4 (lower is better)
Translates to: SRLMVGTGPHRATAHRTSCRRVP*SLSFYL
Trigger: GAGGTAGAAGCTGAGGCTCCAGGGGACCCGACGACA...GGACGTTCTGTGGGCAGTAGCCCTGTGTGGCCCTGTTCCCACCATGAGTCTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648957.1
CDS-3UTR TCA 90 bp CCCTGGAAGGAAAGCCTGGGCCATGTCACTGAGCAGTATGAGAGCAGGTGGGAAACCGGCTCCGTGGAATaGGGGCTAGGCAGGAAAGGC +
Preference number: 4 (lower is better)
Translates to: PWKESLGHVTEQYESRWETGSVE*GLGRKG
Trigger: GCCTTTCCTGCCTAGCCCTCATTCCACGGAGCCGGT...TTCCCACCTGCTCTCATACTGCTCAGTGACATGGCCCAGGCTTTCCTTCCAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000483868.5
CDS-3UTR TCA 90 bp GCGCTCGCTGTCTGTGCTGTTGATGCTGCCAGTGTGGCAGGGCATGGAAGCGATAGCGATGAGGCACACTaGTGTTTGGTGCCAGGGGTG +
Preference number: 4 (lower is better)
Translates to: ALAVCAVDAASVAGHGSDSDEAH*CLVPGV
Trigger: CACCCCTGGCACCAAACATCAGTGTGCCTCATCGCT...ATCGCTTCCATGCCCTGCCACACTGGCAGCATCAACAGCACAGACAGCGAGCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296210.11
ENST00000393400.6
ENST00000483868.5
CDS-3UTR TCA 90 bp GACTCATGGTGGGAACAGGGCCACACAGGGCTACTGCCCACAGAACGTCCCTTGAGCGATGAGGCACACTaGTGTTTGGTGCCAGGGGTG +
Preference number: 4 (lower is better)
Translates to: DSWWEQGHTGLLPTERPLSDEAH*CLVPGV
Trigger: CACCCCTGGCACCAAACATCAGTGTGCCTCATCGCT...CAAGGGACGTTCTGTGGGCAGTAGCCCTGTGTGGCCCTGTTCCCACCATGAGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000483868.5
ENST00000489960.5
ENST00000648957.1
CDS-3UTR TCA 90 bp AGCTGCCCTCAGGCATTGATGGCCTTCCAGCGCTCGCTGTCTGTGCTGTTGATGAAATGGGGCTGGAGGTaGTGCGGATCTTCGCCCGAG +
Preference number: 4 (lower is better)
Translates to: SCPQALMAFQRSLSVLLMKWGWR*CGSSPE
Trigger: CTCGGGCGAAGATCCGCATCACCTCCAGCCCCATTT...CATCAACAGCACAGACAGCGAGCGCTGGAAGGCCATCAATGCCTGAGGGCAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296210.11
ENST00000393400.6
ENST00000483868.5
CDS-3UTR TCA 90 bp CACTTCAGTCCATCCACCATGGTGGATGCTTTGAGGAGGCCAAAGCACCATGGGCCAGGGTCCCCTGGGTaGCAGAGTAGGCCAGGGACA +
Preference number: 4 (lower is better)
Translates to: HFSPSTMVDALRRPKHHGPGSPG*QSRPGT
Trigger: TGTCCCTGGCCTACTCTGTCACCCAGGGGACCCTGG...CCCATGGTGCTTTGGCCTCCTCAAAGCATCCACCATGGTGGATGGACTGAAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000648957.1
CDS-3UTR TCA 90 bp AGGGCTGGGGTAGGTGTACATCTGGCTCCTCTGTCTCGTCCACTTGGCATTTGTCCAGGGTCCCCTGGGTaGCAGAGTAGGCCAGGGACA +
Preference number: 4 (lower is better)
Translates to: RAGVGVHLAPLSRPLGICPGSPG*QSRPGT
Trigger: TGTCCCTGGCCTACTCTGTCACCCAGGGGACCCTGG...ACAAATGCCAAGTGGACGAGACAGAGGAGCCAGATGTACACCTACCCCAGCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393400.6
ENST00000483868.5
CDS-3UTR TCA 90 bp GGAGCCCCAGGGAGGTGGGGCCTCCAGACTCATGGTGGGAACAGGGCCACACAGATTAAAGTCCTCAGCTaGGAGATGGGCATCAGGGTA +
Preference number: 4 (lower is better)
Translates to: GAPGRWGLQTHGGNRATQIKVLS*EMGIRV
Trigger: TACCCTGATGCCCATCTCTCAGCTGAGGACTTTAAT...CTGTGTGGCCCTGTTCCCACCATGAGTCTGGAGGCCCCACCTCCCTGGGGCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000483868.5
ENST00000489960.5
ENST00000648957.1
CDS-3UTR TCA 90 bp TCCATCCACCATGGTGGATGCTTTGAGGAGGCCAAAGCACCATGGGGATGGGATGCTGCCCTCAGGCATTaGTGGCCTTCCAGCGCTCGC +
Preference number: 4 (lower is better)
Translates to: SIHHGGCFEEAKAPWGWDAALRH*WPSSAR
Trigger: GCGAGCGCTGGAAGGCCATCAATGCCTGAGGGCAGC...ATCCCATCCCCATGGTGCTTTGGCCTCCTCAAAGCATCCACCATGGTGGATGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000648957.1
CDS-3UTR TCA 90 bp GGCCCTGGAAGGAAAGCCTGGGCCATGTCACTGAGCAGTATGAGAGCAGGTGGGAGCAGAGCCCCTCGATaGTGTCGAAGCACAGCAGCA +
Preference number: 4 (lower is better)
Translates to: GPGRKAWAMSLSSMRAGGSRAPR*CRSTAA
Trigger: TGCTGCTGTGCTTCGACATCATCGAGGGGCTCTGCT...CCCACCTGCTCTCATACTGCTCAGTGACATGGCCCAGGCTTTCCTTCCAGGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000489960.5
ENST00000648957.1
CDS-3UTR TCA 90 bp AGCCTGGGCCATGTCACTGAGCAGTATGAGAGCAGGTGGGAAGGGGAGGAGGGTAGCAGAGCCCCTCGATaGTGTCGAAGCACAGCAGCA +
Preference number: 4 (lower is better)
Translates to: SLGHVTEQYESRWEGEEGSRAPR*CRSTAA
Trigger: TGCTGCTGTGCTTCGACATCATCGAGGGGCTCTGCT...ACCCTCCTCCCCTTCCCACCTGCTCTCATACTGCTCAGTGACATGGCCCAGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000489960.5
ENST00000648957.1
CDS-3UTR TCA 90 bp CACTTCAGTCCATCCACCATGGTGGATGCTTTGAGGAGGCCAAAGCACCATGGGAGGCGGGCAACAGCCTaGTCCTCAGGGTCCCCACAG +
Preference number: 4 (lower is better)
Translates to: HFSPSTMVDALRRPKHHGRRATA*SSGSPQ
Trigger: CTGTGGGGACCCTGAGGATCAGGCTGTTGCCCGCCT...CCCATGGTGCTTTGGCCTCCTCAAAGCATCCACCATGGTGGATGGACTGAAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355552.8
ENST00000648957.1
CDS-3UTR GCA 90 bp GGTGTACATCTGGCTCCTCTGTCTCGTCCACTTGGCATTTGTAGGAGAAGAGGACGCCGCCACTGGGTGTaGGCGGATCCAGCACAGGCC +
Preference number: 4 (lower is better)
Translates to: GVHLAPLSRPLGICRRRGRRHWV*ADPAQA
Trigger: GGCCTGTGCTGGATCCGCGCACACCCAGTGGCGGCG...TCCTCTTCTCCTACAAATGCCAAGTGGACGAGACAGAGGAGCCAGATGTACACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393400.6
ENST00000483868.5
CDS-3UTR GCA 90 bp GGAAGGAAAGCCTGGGCCATGTCACTGAGCAGTATGAGAGCAGGTGGGAAGGGGGTGGGGGTAGCGCTGTaGTCCCATTGGCCCAAGTCA +
Preference number: 4 (lower is better)
Translates to: GRKAWAMSLSSMRAGGKGVGVAL*SHWPKS
Trigger: TGACTTGGGCCAATGGGAGCACAGCGCTACCCCCAC...CCCCTTCCCACCTGCTCTCATACTGCTCAGTGACATGGCCCAGGCTTTCCTTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000483868.5
ENST00000489960.5
ENST00000648957.1
CDS-3UTR GCA 90 bp GGCCACACAGGGCTACTGCCCACAGAACGTCCCTTGACCTGGTCCTCCTCCCCTTTGCAGCGTTCGAGGTaGTCACCGTCATGGATACCA +
Preference number: 4 (lower is better)
Translates to: GHTGLLPTERPLTWSSSPLQRSR*SPSWIP
Trigger: TGGTATCCATGACGGTGAGCACCTCGAACGCTGCAA...AGGGGAGGAGGACCAGGTCAAGGGACGTTCTGTGGGCAGTAGCCCTGTGTGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000483868.5
ENST00000489960.5
ENST00000648957.1
CDS-3UTR GCA 90 bp CTCCAGACTCATGGTGGGAACAGGGCCACACAGGGCTACTGCCCACAGAACGTCCAGAGTCGAACTGCGTaGTCGAGTAGCTGGCAGCTG +
Preference number: 4 (lower is better)
Translates to: LQTHGGNRATQGYCPQNVQSRTA*SSSWQL
Trigger: CAGCTGCCAGCTACTCGAGCACGCAGTTCGACTCTG...GACGTTCTGTGGGCAGTAGCCCTGTGTGGCCCTGTTCCCACCATGAGTCTGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000483868.5
ENST00000489960.5
ENST00000648957.1
CDS-3UTR GCA 90 bp TCCAGACTCATGGTGGGAACAGGGCCACACAGGGCTACTGCCCACAGAACGTCCCAGAGTCGAACTGCGTaGTCGAGTAGCTGGCAGCTG +
Preference number: 4 (lower is better)
Translates to: SRLMVGTGPHRATAHRTSQSRTA*SSSWQL
Trigger: CAGCTGCCAGCTACTCGAGCACGCAGTTCGACTCTG...GGACGTTCTGTGGGCAGTAGCCCTGTGTGGCCCTGTTCCCACCATGAGTCTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000483868.5
ENST00000489960.5
ENST00000648957.1
CDS-3UTR GCA 90 bp TGGCAGCTGCCCTCAGGCATTGATGGCCTTCCAGCGCTCGCTGTCTGTGCTGTTTGCAGAGAAGGAGGGTaGCCTCAGCCAACCTTGCCA +
Preference number: 4 (lower is better)
Translates to: WQLPSGIDGLPALAVCAVCREGG*PQPTLP
Trigger: TGGCAAGGTTGGCTGAGGGCACCCTCCTTCTCTGCA...AACAGCACAGACAGCGAGCGCTGGAAGGCCATCAATGCCTGAGGGCAGCTGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296210.11
ENST00000393400.6
ENST00000483868.5
CDS-3UTR GCA 90 bp CAGTCCATCCACCATGGTGGATGCTTTGAGGAGGCCAAAGCACCATGGGGATGGCCCTCGTGCCAAGGGTaGAGAGAAGGAGGGTGCCCT +
Preference number: 4 (lower is better)
Translates to: QSIHHGGCFEEAKAPWGWPSCQG*REGGCP
Trigger: AGGGCACCCTCCTTCTCTGCACCCTTGGCACGAGGG...CCATCCCCATGGTGCTTTGGCCTCCTCAAAGCATCCACCATGGTGGATGGACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000648957.1
CDS-3UTR GCA 90 bp CCCTGGAAGGAAAGCCTGGGCCATGTCACTGAGCAGTATGAGAGCAGGTGGGAACCCTCGTGCCAAGGGTaGAGAGAAGGAGGGTGCCCT +
Preference number: 4 (lower is better)
Translates to: PWKESLGHVTEQYESRWEPSCQG*REGGCP
Trigger: AGGGCACCCTCCTTCTCTGCACCCTTGGCACGAGGG...TTCCCACCTGCTCTCATACTGCTCAGTGACATGGCCCAGGCTTTCCTTCCAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000483868.5
ENST00000489960.5
ENST00000648957.1
CDS-3UTR GCA 90 bp GGGAGAGCCAGCCCTGCCCTCGTGCCAAGGGTGCAGAGAAGGAGGGTGCCCTCACAGCCCCAGTATTCCTaGAAAACCTCCACATTAGCA +
Preference number: 4 (lower is better)
Translates to: GRASPALVPRVQRRRVPSQPQYS*KTSTLA
Trigger: TGCTAATGTGGAGGTTTTGCAGGAATACTGGGGCTG...TGAGGGCACCCTCCTTCTCTGCACCCTTGGCACGAGGGCAGGGCTGGCTCTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355552.8
ENST00000648957.1
CDS-3UTR GCA 90 bp CATTGGCCCCACAGACATGAGCTGTGTTGGAGCTTGTGCCCTCGGCACCCCATTTCCCCGAGTCCTGTCTaGTGGGGGCCTACTATGTGC +
Preference number: 4 (lower is better)
Translates to: HWPHRHELCWSLCPRHPISPSPV*WGPTMC
Trigger: GCACATAGTAGGCCCCCAGCAGACAGGACTCGGGGA...AATGGGGTGCCGAGGGCACAAGCTCCAACACAGCTCATGTCTGTGGGGCCAATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000355552.8
ENST00000648957.1
CDS-3UTR GCA 90 bp CTGGATGGGCTCCTCCTCTCCAACTCTGGGGATTACATAACTGGCAGCAACTCCCCCTGCAGTACCCCCTaGAGCCCAGGAGTCCAGCTC +
Preference number: 4 (lower is better)
Translates to: LDGLLLSNSGDYITGSNSPCSTP*SPGVQL
Trigger: GAGCTGGACTCCTGGGCTGCAGGGGGTACTGCAGGG...GGAGTTGCTGCCAGTTATGTAATCCCCAGAGTTGGAGAGGAGGAGCCCATCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000355552.8
ENST00000648957.1
CDS-3UTR GCA 90 bp CACTTCAGTCCATCCACCATGGTGGATGCTTTGAGGAGGCCAAAGCACCATGGGACCCTCCCCACCCACTaGAGCTCAGTGTGGGGCTCC +
Preference number: 4 (lower is better)
Translates to: HFSPSTMVDALRRPKHHGTLPTH*SSVWGS
Trigger: GGAGCCCCACACTGAGCTGCAGTGGGTGGGGAGGGT...CCCATGGTGCTTTGGCCTCCTCAAAGCATCCACCATGGTGGATGGACTGAAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450633.6
CDS-3UTR GCA 90 bp GCCCTCAGGCTCCTGAAAGGAACCAGCCCCAGTATTCCTGCAAAACCTCCACATAGCCAGCCCTGGATGTaGAGCGGTCGCATGGAGCCC +
Preference number: 4 (lower is better)
Translates to: ALRLLKGTSPSIPAKPPHSQPWM*SGRMEP
Trigger: GGGCTCCATGCGACCGCTGCACATCCAGGGCTGGCT...ATGTGGAGGTTTTGCAGGAATACTGGGGCTGGTTCCTTTCAGGAGCCTGAGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648957.1
CDS-3UTR GCA 90 bp GGCCACACAGGGCTACTGCCCACAGAACGTCCCTTGACCTGGTCCTCCTCCCCTACAGCACAGAGGAGGTaGAGAGACAAGACGCTGCTT +
Preference number: 4 (lower is better)
Translates to: GHTGLLPTERPLTWSSSPTAQRR*RDKTLL
Trigger: AAGCAGCGTCTTGTCTCTGCACCTCCTCTGTGCTGT...AGGGGAGGAGGACCAGGTCAAGGGACGTTCTGTGGGCAGTAGCCCTGTGTGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489960.5
CDS-3UTR CCA 90 bp CTCCAGACTCATGGTGGGAACAGGGCCACACAGGGCTACTGCCCACAGAACGTCCCCAGTACCGGACCCTaGAGGTGCCAATGTCTTCGT +
Preference number: 4 (lower is better)
Translates to: LQTHGGNRATQGYCPQNVPSTGP*RCQCLR
Trigger: ACGAAGACATTGGCACCTCCAGGGTCCGGTACTGGG...GACGTTCTGTGGGCAGTAGCCCTGTGTGGCCCTGTTCCCACCATGAGTCTGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000483868.5
ENST00000489960.5
ENST00000648957.1
CDS-3UTR CCA 90 bp GGCCCTGGAAGGAAAGCCTGGGCCATGTCACTGAGCAGTATGAGAGCAGGTGGGCCCAGTACCGGACCCTaGAGGTGCCAATGTCTTCGT +
Preference number: 4 (lower is better)
Translates to: GPGRKAWAMSLSSMRAGGPSTGP*RCQCLR
Trigger: ACGAAGACATTGGCACCTCCAGGGTCCGGTACTGGG...CCCACCTGCTCTCATACTGCTCAGTGACATGGCCCAGGCTTTCCTTCCAGGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000483868.5
ENST00000489960.5
ENST00000648957.1
CDS-3UTR CCA 90 bp AGCCTGGGCCATGTCACTGAGCAGTATGAGAGCAGGTGGGAAGGGGAGGAGGGTTCACACTCAGCTCGATaGCCAGCAGGAAGAAGCGGG +
Preference number: 4 (lower is better)
Translates to: SLGHVTEQYESRWEGEEGSHSAR*PAGRSG
Trigger: CCCGCTTCTTCCTGCTGGCCATCGAGCTGAGTGTGA...ACCCTCCTCCCCTTCCCACCTGCTCTCATACTGCTCAGTGACATGGCCCAGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000483868.5
ENST00000489960.5
ENST00000648957.1
CDS-3UTR CCA 90 bp GGAAGGAAAGCCTGGGCCATGTCACTGAGCAGTATGAGAGCAGGTGGGAAGGGGGACTTACTCTCCAGGTaGCCAAAGGCCAGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: GRKAWAMSLSSMRAGGKGDLLSR*PKARPR
Trigger: CCTGGGCCTGGCCTTTGGCCACCTGGAGAGTAAGTC...CCCCTTCCCACCTGCTCTCATACTGCTCAGTGACATGGCCCAGGCTTTCCTTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000483868.5
ENST00000489960.5
ENST00000648957.1
CDS-3UTR CCA 90 bp GATGGCCTTCCAGCGCTCGCTGTCTGTGCTGTTGATGCTGCCAGTGTGGCAGGGAGGAGAAGAGGATCTTaGGCTCCGAGCCGAAGAAGC +
Preference number: 4 (lower is better)
Translates to: DGLPALAVCAVDAASVAGRRRGS*APSRRS
Trigger: GCTTCTTCGGCTCGGAGCCCAAGATCCTCTTCTCCT...CCCTGCCACACTGGCAGCATCAACAGCACAGACAGCGAGCGCTGGAAGGCCATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296210.11
ENST00000393400.6
ENST00000483868.5
CDS-3UTR CCA 90 bp CTGGATGGGCTCCTCCTCTCCAACTCTGGGGATTACATAACTGGCAGCAACTCCGCGTGCTCGAGTAGCTaGCAGCTGAGGCCCCAGCAG +
Preference number: 4 (lower is better)
Translates to: LDGLLLSNSGDYITGSNSACSSS*QLRPQQ
Trigger: CTGCTGGGGCCTCAGCTGCCAGCTACTCGAGCACGC...GGAGTTGCTGCCAGTTATGTAATCCCCAGAGTTGGAGAGGAGGAGCCCATCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355552.8
ENST00000648957.1
CDS-3UTR CCA 90 bp AGGGCTGGGGTAGGTGTACATCTGGCTCCTCTGTCTCGTCCACTTGGCATTTGTGCGTGCTCGAGTAGCTaGCAGCTGAGGCCCCAGCAG +
Preference number: 4 (lower is better)
Translates to: RAGVGVHLAPLSRPLGICACSSS*QLRPQQ
Trigger: CTGCTGGGGCCTCAGCTGCCAGCTACTCGAGCACGC...ACAAATGCCAAGTGGACGAGACAGAGGAGCCAGATGTACACCTACCCCAGCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393400.6
ENST00000483868.5
CDS-3UTR CCA 90 bp GTGGGAACAGGGCCACACAGGGCTACTGCCCACAGAACGTCCCTTGACCTGGTCCAGTGTGGCAGGGCATaGAAGCGATGTCATCCAGGT +
Preference number: 4 (lower is better)
Translates to: VGTGPHRATAHRTSLDLVQCGRA*KRCHPG
Trigger: ACCTGGATGACATCGCTTCCATGCCCTGCCACACTG...GACCAGGTCAAGGGACGTTCTGTGGGCAGTAGCCCTGTGTGGCCCTGTTCCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000483868.5
ENST00000489960.5
ENST00000648957.1
CDS-3UTR CCA 90 bp TCCAGCTCACTGGCCGTACTGTTGGCCCTGTCCGCTATCAACCCTCCAGGCCCTTTGATGCTGCCAGTGTaGCAGGGCATGGAAGCGATG +
Preference number: 4 (lower is better)
Translates to: SSSLAVLLALSAINPPGPLMLPV*QGMEAM
Trigger: CATCGCTTCCATGCCCTGCCACACTGGCAGCATCAA...AGGGCCTGGAGGGTTGATAGCGGACAGGGCCAACAGTACGGCCAGTGAGCTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355552.8
ENST00000648957.1
CDS-3UTR CCA 90 bp GTGGGAACAGGGCCACACAGGGCTACTGCCCACAGAACGTCCCTTGACCTGGTCTTGATGCTGCCAGTGTaGCAGGGCATGGAAGCGATG +
Preference number: 4 (lower is better)
Translates to: VGTGPHRATAHRTSLDLVLMLPV*QGMEAM
Trigger: CATCGCTTCCATGCCCTGCCACACTGGCAGCATCAA...GACCAGGTCAAGGGACGTTCTGTGGGCAGTAGCCCTGTGTGGCCCTGTTCCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000483868.5
ENST00000489960.5
ENST00000648957.1
CDS-3UTR CCA 90 bp GAAGCCCCGGAGGAAAGCCACGTAGATGAGCGGAGCGAAGAAGCTGAAGTACAGGTCCTCCACAGGCCCTaGCAGCTGCCCTCAGGCATT +
Preference number: 4 (lower is better)
Translates to: EAPEESHVDERSEEAEVQVLHRP*QLPSGI
Trigger: AATGCCTGAGGGCAGCTGCCAGGGCCTGTGGAGGAC...CTGTACTTCAGCTTCTTCGCTCCGCTCATCTACGTGGCTTTCCTCCGGGGCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393400.6
ENST00000483868.5
CDS-3UTR CCA 90 bp CCCTGGAAGGAAAGCCTGGGCCATGTCACTGAGCAGTATGAGAGCAGGTGGGAAGTCCTCCACAGGCCCTaGCAGCTGCCCTCAGGCATT +
Preference number: 4 (lower is better)
Translates to: PWKESLGHVTEQYESRWEVLHRP*QLPSGI
Trigger: AATGCCTGAGGGCAGCTGCCAGGGCCTGTGGAGGAC...TTCCCACCTGCTCTCATACTGCTCAGTGACATGGCCCAGGCTTTCCTTCCAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000483868.5
ENST00000489960.5
ENST00000648957.1
CDS-3UTR CCA 90 bp ACACTTCAGTCCATCCACCATGGTGGATGCTTTGAGGAGGCCAAAGCACCATGGCTGGTCCTCCTCCCCTaGGGACTCTGGGCCTGCTGG +
Preference number: 4 (lower is better)
Translates to: TLQSIHHGGCFEEAKAPWLVLLP*GLWACW
Trigger: CCAGCAGGCCCAGAGTCCCCAGGGGAGGAGGACCAG...CCATGGTGCTTTGGCCTCCTCAAAGCATCCACCATGGTGGATGGACTGAAGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000648957.1
CDS-3UTR CCA 90 bp CAGTCCATCCACCATGGTGGATGCTTTGAGGAGGCCAAAGCACCATGGGGATGGGAACGTCCCTTGACCTaGTCCTCCTCCCCTGGGGAC +
Preference number: 4 (lower is better)
Translates to: QSIHHGGCFEEAKAPWGWERPLT*SSSPGD
Trigger: GTCCCCAGGGGAGGAGGACCAGGTCAAGGGACGTTC...CCATCCCCATGGTGCTTTGGCCTCCTCAAAGCATCCACCATGGTGGATGGACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000648957.1
CDS-3UTR CCA 90 bp GCCGAAGAAGCCCCGGAGGAAAGCCACGTAGATGAGCGGAGCGAAGAAGCTGAACAGTATGAGAGCAGGTaGGAAGGGGAGGAGGGTCCC +
Preference number: 4 (lower is better)
Translates to: AEEAPEESHVDERSEEAEQYESR*EGEEGP
Trigger: GGGACCCTCCTCCCCTTCCCACCTGCTCTCATACTG...TTCAGCTTCTTCGCTCCGCTCATCTACGTGGCTTTCCTCCGGGGCTTCTTCGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393400.6
ENST00000483868.5
CDS-3UTR CCA 90 bp TCCAGCTCACTGGCCGTACTGTTGGCCCTGTCCGCTATCAACCCTCCAGGCCCTCCTGGAAGGAAAGCCTaGGCCATGTCACTGAGCAGT +
Preference number: 4 (lower is better)
Translates to: SSSLAVLLALSAINPPGPPGRKA*AMSLSS
Trigger: ACTGCTCAGTGACATGGCCCAGGCTTTCCTTCCAGG...AGGGCCTGGAGGGTTGATAGCGGACAGGGCCAACAGTACGGCCAGTGAGCTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355552.8
ENST00000648957.1
CDS-3UTR CCA 90 bp CTCCAGACTCATGGTGGGAACAGGGCCACACAGGGCTACTGCCCACAGAACGTCACCATGGGGATGGGATaGAGGCATTGGGAGAGCCAG +
Preference number: 4 (lower is better)
Translates to: LQTHGGNRATQGYCPQNVTMGMG*RHWESQ
Trigger: CTGGCTCTCCCAATGCCTCCATCCCATCCCCATGGT...GACGTTCTGTGGGCAGTAGCCCTGTGTGGCCCTGTTCCCACCATGAGTCTGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000483868.5
ENST00000489960.5
ENST00000648957.1
CDS-3UTR CCA 90 bp GACTCATGGTGGGAACAGGGCCACACAGGGCTACTGCCCACAGAACGTCCCTTGACCATGGGGATGGGATaGAGGCATTGGGAGAGCCAG +
Preference number: 4 (lower is better)
Translates to: DSWWEQGHTGLLPTERPLTMGMG*RHWESQ
Trigger: CTGGCTCTCCCAATGCCTCCATCCCATCCCCATGGT...CAAGGGACGTTCTGTGGGCAGTAGCCCTGTGTGGCCCTGTTCCCACCATGAGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000483868.5
ENST00000489960.5
ENST00000648957.1
CDS-3UTR CCA 90 bp CGATGTCATCCAGGTAGGCCACCCCGCCGGCAGAGTCGAACTGCGTGCTCGAGTAAAGCACCATGGGGATaGGATGGAGGCATTGGGAGA +
Preference number: 4 (lower is better)
Translates to: RCHPGRPPRRQSRTACSSKAPWG*DGGIGR
Trigger: TCTCCCAATGCCTCCATCCCATCCCCATGGTGCTTT...ACTCGAGCACGCAGTTCGACTCTGCCGGCGGGGTGGCCTACCTGGATGACATCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393400.6
ENST00000483868.5
CDS-3UTR CCA 90 bp CACTTCAGTCCATCCACCATGGTGGATGCTTTGAGGAGGCCAAAGCACCATGGGAGCCAGCCCAGGGCTTaGGCACTGGGGACTGCTCCT +
Preference number: 4 (lower is better)
Translates to: HFSPSTMVDALRRPKHHGSQPRA*ALGTAP
Trigger: AGGAGCAGTCCCCAGTGCCCAAGCCCTGGGCTGGCT...CCCATGGTGCTTTGGCCTCCTCAAAGCATCCACCATGGTGGATGGACTGAAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355552.8
ENST00000648957.1
CDS-3UTR CCA 90 bp TCCAGACTCATGGTGGGAACAGGGCCACACAGGGCTACTGCCCACAGAACGTCCCCGAGTCCTGTCTGCTaGGGGCCTACTATGTGCCAA +
Preference number: 4 (lower is better)
Translates to: SRLMVGTGPHRATAHRTSPSPVC*GPTMCQ
Trigger: TTGGCACATAGTAGGCCCCCAGCAGACAGGACTCGG...GGACGTTCTGTGGGCAGTAGCCCTGTGTGGCCCTGTTCCCACCATGAGTCTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355552.8
ENST00000648957.1
CDS-3UTR CCA 90 bp CTCCAGACTCATGGTGGGAACAGGGCCACACAGGGCTACTGCCCACAGAACGTCCCGAGTCCTGTCTGCTaGGGGCCTACTATGTGCCAA +
Preference number: 4 (lower is better)
Translates to: LQTHGGNRATQGYCPQNVPSPVC*GPTMCQ
Trigger: TTGGCACATAGTAGGCCCCCAGCAGACAGGACTCGG...GACGTTCTGTGGGCAGTAGCCCTGTGTGGCCCTGTTCCCACCATGAGTCTGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355552.8
ENST00000648957.1
CDS-3UTR CCA 90 bp GGCCCTGGAAGGAAAGCCTGGGCCATGTCACTGAGCAGTATGAGAGCAGGTGGGTGGCTGTGTCCTGGATaGGCTCCTCCTCTCCAACTC +
Preference number: 4 (lower is better)
Translates to: GPGRKAWAMSLSSMRAGGWLCPG*APPLQL
Trigger: GAGTTGGAGAGGAGGAGCCCATCCAGGACACAGCCA...CCCACCTGCTCTCATACTGCTCAGTGACATGGCCCAGGCTTTCCTTCCAGGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355552.8
ENST00000648957.1
CDS-3UTR CCA 90 bp GGCCCTGGAAGGAAAGCCTGGGCCATGTCACTGAGCAGTATGAGAGCAGGTGGGAGGAGTCCAGCTCACTaGCCGTACTGTTGGCCCTGT +
Preference number: 4 (lower is better)
Translates to: GPGRKAWAMSLSSMRAGGRSPAH*PYCWPC
Trigger: ACAGGGCCAACAGTACGGCCAGTGAGCTGGACTCCT...CCCACCTGCTCTCATACTGCTCAGTGACATGGCCCAGGCTTTCCTTCCAGGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355552.8
ENST00000648957.1
CDS-3UTR CCA 90 bp GGCCCTGGAAGGAAAGCCTGGGCCATGTCACTGAGCAGTATGAGAGCAGGTGGGGGCGGAATCGAAGACTaGAAAGCTGAGGACGCGCCA +
Preference number: 4 (lower is better)
Translates to: GPGRKAWAMSLSSMRAGGGGIED*KAEDAP
Trigger: TGGCGCGTCCTCAGCTTTCCAGTCTTCGATTCCGCC...CCCACCTGCTCTCATACTGCTCAGTGACATGGCCCAGGCTTTCCTTCCAGGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000489960.5
3UTR CAA 72 bp GCATTGATGGCCTTCCAGCGCTCGCTGTCTGTGCTGTaGATGCTGCCAGTGTGGCAGGGCATGGAAGCGATG +
Preference number: 4 (lower is better)
Translates to: ALMAFQRSLSVL*MLPVWQGMEAM
Trigger: CATCGCTTCCATGCCCTGCCACACTGGCAGCATCAACAGCACAGACAGCGAGCGCTGGAAGGCCATCAATGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296210.11
ENST00000393400.6
ENST00000483868.5
CDS-3UTR TCA 90 bp ATCCACCATGGTGGATGCTTTGAGGAGGCCAAAGCACCATGGGGATGGGATGGAACCGGCTCCGTGGAATaGGGGCTAGGCAGGAAAGGC +
Preference number: 4 (lower is better)
Translates to: IHHGGCFEEAKAPWGWDGTGSVE*GLGRKG
Trigger: GCCTTTCCTGCCTAGCCCTCATTCCACGGAGCCGGT...TCCATCCCATCCCCATGGTGCTTTGGCCTCCTCAAAGCATCCACCATGGTGGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
CDS-3UTR TCA 90 bp GGCCCTGGAAGGAAAGCCTGGGCCATGTCACTGAGCAGTATGAGAGCAGGTGGGAGCAGCAGGCAGCGATaGGGCACACTGATGTTTGGT +
Preference number: 4 (lower is better)
Translates to: GPGRKAWAMSLSSMRAGGSSRQR*GTLMFG
Trigger: ACCAAACATCAGTGTGCCTCATCGCTGCCTGCTGCT...CCCACCTGCTCTCATACTGCTCAGTGACATGGCCCAGGCTTTCCTTCCAGGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000483868.5
ENST00000489960.5
ENST00000648957.1
CDS-3UTR TCA 90 bp CTCCAGACTCATGGTGGGAACAGGGCCACACAGGGCTACTGCCCACAGAACGTCAGCAGCAGGCAGCGATaGGGCACACTGATGTTTGGT +
Preference number: 4 (lower is better)
Translates to: LQTHGGNRATQGYCPQNVSSRQR*GTLMFG
Trigger: ACCAAACATCAGTGTGCCTCATCGCTGCCTGCTGCT...GACGTTCTGTGGGCAGTAGCCCTGTGTGGCCCTGTTCCCACCATGAGTCTGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000483868.5
ENST00000489960.5
ENST00000648957.1
CDS-3UTR TCA 90 bp TGGGAACAGGGCCACACAGGGCTACTGCCCACAGAACGTCCCTTGACCTGGTCCTCCAGAGCAGGAAGATaGGGAAGAGCACATTGGGGA +
Preference number: 4 (lower is better)
Translates to: WEQGHTGLLPTERPLTWSSRAGR*GRAHWG
Trigger: TCCCCAATGTGCTCTTCCTCATCTTCCTGCTCTGGA...GGACCAGGTCAAGGGACGTTCTGTGGGCAGTAGCCCTGTGTGGCCCTGTTCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000483868.5
ENST00000489960.5
ENST00000648957.1
CDS-3UTR TCA 90 bp CCCTGGAAGGAAAGCCTGGGCCATGTCACTGAGCAGTATGAGAGCAGGTGGGAAAAATGGGGCTGGAGGTaGTGCGGATCTTCGCCCGAG +
Preference number: 4 (lower is better)
Translates to: PWKESLGHVTEQYESRWEKWGWR*CGSSPE
Trigger: CTCGGGCGAAGATCCGCATCACCTCCAGCCCCATTT...TTCCCACCTGCTCTCATACTGCTCAGTGACATGGCCCAGGCTTTCCTTCCAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000483868.5
ENST00000489960.5
ENST00000648957.1
CDS-3UTR TCA 90 bp CCCTGGAAGGAAAGCCTGGGCCATGTCACTGAGCAGTATGAGAGCAGGTGGGAAAGGCCAGGCCCAGGATaGTCACACTCAGCTCGATGG +
Preference number: 4 (lower is better)
Translates to: PWKESLGHVTEQYESRWERPGPG*SHSARW
Trigger: CCATCGAGCTGAGTGTGATCATCCTGGGCCTGGCCT...TTCCCACCTGCTCTCATACTGCTCAGTGACATGGCCCAGGCTTTCCTTCCAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000483868.5
ENST00000489960.5
ENST00000648957.1
CDS-3UTR TCA 90 bp GGAAGGAAAGCCTGGGCCATGTCACTGAGCAGTATGAGAGCAGGTGGGAAGGGGTGGCCAGCACCCGCTTaGTGCTGGACTTACTCTCCA +
Preference number: 4 (lower is better)
Translates to: GRKAWAMSLSSMRAGGKGWPAPA*CWTYSP
Trigger: TGGAGAGTAAGTCCAGCATCAAGCGGGTGCTGGCCA...CCCCTTCCCACCTGCTCTCATACTGCTCAGTGACATGGCCCAGGCTTTCCTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000483868.5
ENST00000489960.5
ENST00000648957.1
CDS-3UTR TCA 90 bp CAGGCATTGATGGCCTTCCAGCGCTCGCTGTCTGTGCTGTTGATGCTGCCAGTGTGGCCAGCACCCGCTTaGTGCTGGACTTACTCTCCA +
Preference number: 4 (lower is better)
Translates to: QALMAFQRSLSVLLMLPVWPAPA*CWTYSP
Trigger: TGGAGAGTAAGTCCAGCATCAAGCGGGTGCTGGCCA...CACTGGCAGCATCAACAGCACAGACAGCGAGCGCTGGAAGGCCATCAATGCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296210.11
ENST00000393400.6
ENST00000483868.5
CDS-3UTR TCA 90 bp GCGCTCGCTGTCTGTGCTGTTGATGCTGCCAGTGTGGCAGGGCATGGAAGCGATGCGGAGCGAAGAAGCTaGAGTACAGGAAGGTTGTGG +
Preference number: 4 (lower is better)
Translates to: ALAVCAVDAASVAGHGSDAERRS*STGRLW
Trigger: CCACAACCTTCCTGTACTTCAGCTTCTTCGCTCCGC...ATCGCTTCCATGCCCTGCCACACTGGCAGCATCAACAGCACAGACAGCGAGCGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296210.11
ENST00000393400.6
ENST00000483868.5
CDS-3UTR TCA 90 bp AGTCCATCCACCATGGTGGATGCTTTGAGGAGGCCAAAGCACCATGGGGATGGGCGCTGTCTGTGCTGTTaGTGCTGCCAGTGTGGCAGG +
Preference number: 4 (lower is better)
Translates to: SPSTMVDALRRPKHHGDGRCLCC*CCQCGR
Trigger: CCTGCCACACTGGCAGCATCAACAGCACAGACAGCG...CCCATCCCCATGGTGCTTTGGCCTCCTCAAAGCATCCACCATGGTGGATGGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000648957.1
CDS-3UTR TCA 90 bp CCAACCCTTACCCCGCTCACTCAGAATGCCGTGAGCTTGCCTTCCCTGATTACCCGCTGTCTGTGCTGTTaGTGCTGCCAGTGTGGCAGG +
Preference number: 4 (lower is better)
Translates to: PTLTPLTQNAVSLPSLITRCLCC*CCQCGR
Trigger: CCTGCCACACTGGCAGCATCAACAGCACAGACAGCG...GGTAATCAGGGAAGGCAAGCTCACGGCATTCTGAGTGAGCGGGGTAAGGGTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355552.8
ENST00000648957.1
CDS-3UTR TCA 90 bp ATCCACCATGGTGGATGCTTTGAGGAGGCCAAAGCACCATGGGGATGGGATGGACCACAGAACGTCCCTTaGCCTGGTCCTCCTCCCCTG +
Preference number: 4 (lower is better)
Translates to: IHHGGCFEEAKAPWGWDGPQNVP*PGPPPL
Trigger: CAGGGGAGGAGGACCAGGTCAAGGGACGTTCTGTGG...TCCATCCCATCCCCATGGTGCTTTGGCCTCCTCAAAGCATCCACCATGGTGGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000648957.1
CDS-3UTR TCA 90 bp GGCCCTGGAAGGAAAGCCTGGGCCATGTCACTGAGCAGTATGAGAGCAGGTGGGCCATGGTGGATGCTTTaGGGAGGCCAAAGCACCATG +
Preference number: 4 (lower is better)
Translates to: GPGRKAWAMSLSSMRAGGPWWML*GGQSTM
Trigger: CATGGTGCTTTGGCCTCCTCAAAGCATCCACCATGG...CCCACCTGCTCTCATACTGCTCAGTGACATGGCCCAGGCTTTCCTTCCAGGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000483868.5
ENST00000648957.1
CDS-3UTR TCA 90 bp GCGCTCGCTGTCTGTGCTGTTGATGCTGCCAGTGTGGCAGGGCATGGAAGCGATCCATGGTGGATGCTTTaGGGAGGCCAAAGCACCATG +
Preference number: 4 (lower is better)
Translates to: ALAVCAVDAASVAGHGSDPWWML*GGQSTM
Trigger: CATGGTGCTTTGGCCTCCTCAAAGCATCCACCATGG...ATCGCTTCCATGCCCTGCCACACTGGCAGCATCAACAGCACAGACAGCGAGCGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296210.11
ENST00000393400.6
ENST00000483868.5
CDS-3UTR TCA 90 bp GGCCCTGGAAGGAAAGCCTGGGCCATGTCACTGAGCAGTATGAGAGCAGGTGGGGGGTCTTGGGAAGGATaGCCACCAGAGAGTAGACCA +
Preference number: 4 (lower is better)
Translates to: GPGRKAWAMSLSSMRAGGGSWEG*PPESRP
Trigger: TGGTCTACTCTCTGGTGGTCATCCTTCCCAAGACCC...CCCACCTGCTCTCATACTGCTCAGTGACATGGCCCAGGCTTTCCTTCCAGGGCC
59% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000355552.8
ENST00000450633.6
ENST00000483868.5
ENST00000489960.5
ENST00000648957.1
CDS-3UTR TCA 90 bp GACTCATGGTGGGAACAGGGCCACACAGGGCTACTGCCCACAGAACGTCCCTTGGGGTCTTGGGAAGGATaGCCACCAGAGAGTAGACCA +
Preference number: 4 (lower is better)
Translates to: DSWWEQGHTGLLPTERPLGSWEG*PPESRP
Trigger: TGGTCTACTCTCTGGTGGTCATCCTTCCCAAGACCC...CAAGGGACGTTCTGTGGGCAGTAGCCCTGTGTGGCCCTGTTCCCACCATGAGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355552.8
ENST00000450633.6
ENST00000483868.5
ENST00000489960.5
ENST00000648957.1
CDS-3UTR TCA 90 bp AGCCTGGGCCATGTCACTGAGCAGTATGAGAGCAGGTGGGAAGGGGAGGAGGGTGGGTCTTGGGAAGGATaGCCACCAGAGAGTAGACCA +
Preference number: 4 (lower is better)
Translates to: SLGHVTEQYESRWEGEEGGSWEG*PPESRP
Trigger: TGGTCTACTCTCTGGTGGTCATCCTTCCCAAGACCC...ACCCTCCTCCCCTTCCCACCTGCTCTCATACTGCTCAGTGACATGGCCCAGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355552.8
ENST00000450633.6
ENST00000483868.5
ENST00000489960.5
ENST00000648957.1
CDS-3UTR TCA 90 bp GATTGGGAGCCCCAGGGAGGTGGGGCCTCCAGACTCATGGTGGGAACAGGGCCACCCAGTGCTTTGCTCTaGTTTACTCCCATTTTCAGC +
Preference number: 4 (lower is better)
Translates to: DWEPQGGGASRLMVGTGPPSALL*FTPIFS
Trigger: GCTGAAAATGGGAGTAAATCAGAGCAAAGCACTGGG...TGGCCCTGTTCCCACCATGAGTCTGGAGGCCCCACCTCCCTGGGGCTCCCAATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355552.8
ENST00000648957.1
CDS-3UTR TCA 90 bp CCCTGGAAGGAAAGCCTGGGCCATGTCACTGAGCAGTATGAGAGCAGGTGGGAAGACCTCCCCAGGCTCTaGAGCATGCAGTTGGCTGTG +
Preference number: 4 (lower is better)
Translates to: PWKESLGHVTEQYESRWEDLPRL*SMQLAV
Trigger: CACAGCCAACTGCATGCTTCAGAGCCTGGGGAGGTC...TTCCCACCTGCTCTCATACTGCTCAGTGACATGGCCCAGGCTTTCCTTCCAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355552.8
ENST00000648957.1
CDS-3UTR TCA 90 bp GGAGCCCCAGGGAGGTGGGGCCTCCAGACTCATGGTGGGAACAGGGCCACACAGCCACTTGACATGGAATaGTCTCCAAGATCCATTGGA +
Preference number: 4 (lower is better)
Translates to: GAPGRWGLQTHGGNRATQPLDME*SPRSIG
Trigger: TCCAATGGATCTTGGAGATCATTCCATGTCAAGTGG...CTGTGTGGCCCTGTTCCCACCATGAGTCTGGAGGCCCCACCTCCCTGGGGCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355552.8
ENST00000648957.1
CDS-3UTR TCA 90 bp CAGTCCATCCACCATGGTGGATGCTTTGAGGAGGCCAAAGCACCATGGGGATGGCTGGTCTCGAACTCCTaGGCTTGTGATCCGCCCACC +
Preference number: 4 (lower is better)
Translates to: QSIHHGGCFEEAKAPWGWLVSNS*ACDPPT
Trigger: GGTGGGCGGATCACAAGCTCAGGAGTTCGAGACCAG...CCATCCCCATGGTGCTTTGGCCTCCTCAAAGCATCCACCATGGTGGATGGACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648957.1
CDS-3UTR TCA 90 bp GATTGGGAGCCCCAGGGAGGTGGGGCCTCCAGACTCATGGTGGGAACAGGGCCATGCCTTCTCTCAGAGTaGGCAAAGCTGCAGTCTTTT +
Preference number: 4 (lower is better)
Translates to: DWEPQGGGASRLMVGTGPCLLSE*AKLQSF
Trigger: AAAAGACTGCAGCTTTGCTCACTCTGAGAGAAGGCA...TGGCCCTGTTCCCACCATGAGTCTGGAGGCCCCACCTCCCTGGGGCTCCCAATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648957.1
CDS-3UTR GCA 90 bp CTCCAGACTCATGGTGGGAACAGGGCCACACAGGGCTACTGCCCACAGAACGTCACCGGACCCTGGAGGTaGCAATGTCTTCGTAGAGCA +
Preference number: 4 (lower is better)
Translates to: LQTHGGNRATQGYCPQNVTGPWR*QCLRRA
Trigger: TGCTCTACGAAGACATTGGCACCTCCAGGGTCCGGT...GACGTTCTGTGGGCAGTAGCCCTGTGTGGCCCTGTTCCCACCATGAGTCTGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000483868.5
ENST00000489960.5
ENST00000648957.1
CDS-3UTR GCA 90 bp GCTCACTGGCCGTACTGTTGGCCCTGTCCGCTATCAACCCTCCAGGCCCTCCCACTTATCAGCAACAGTTaGAGCGTTCGAGGTGCTCAC +
Preference number: 4 (lower is better)
Translates to: AHWPYCWPCPLSTLQALPLISNS*SVRGAH
Trigger: GTGAGCACCTCGAACGCTGCAACTGTTGCTGATAAG...TGGGAGGGCCTGGAGGGTTGATAGCGGACAGGGCCAACAGTACGGCCAGTGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355552.8
ENST00000648957.1
CDS-3UTR GCA 90 bp CATTGGCCCCACAGACATGAGCTGTGTTGGAGCTTGTGCCCTCGGCACCCCATTCAGAGTCGAACTGCGTaGTCGAGTAGCTGGCAGCTG +
Preference number: 4 (lower is better)
Translates to: HWPHRHELCWSLCPRHPIQSRTA*SSSWQL
Trigger: CAGCTGCCAGCTACTCGAGCACGCAGTTCGACTCTG...AATGGGGTGCCGAGGGCACAAGCTCCAACACAGCTCATGTCTGTGGGGCCAATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355552.8
ENST00000648957.1
CDS-3UTR GCA 90 bp CAGGCATTGATGGCCTTCCAGCGCTCGCTGTCTGTGCTGTTGATGCTGCCAGTGCAGAGTCGAACTGCGTaGTCGAGTAGCTGGCAGCTG +
Preference number: 4 (lower is better)
Translates to: QALMAFQRSLSVLLMLPVQSRTA*SSSWQL
Trigger: CAGCTGCCAGCTACTCGAGCACGCAGTTCGACTCTG...CACTGGCAGCATCAACAGCACAGACAGCGAGCGCTGGAAGGCCATCAATGCCTG
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296210.11
ENST00000393400.6
ENST00000483868.5
CDS-3UTR GCA 90 bp TGTGAACACAGGATGGCTCTGGAAGGTTATGGAGACCCTGGGTGCTTCAGGAGGCCCTCGTGCCAAGGGTaGAGAGAAGGAGGGTGCCCT +
Preference number: 4 (lower is better)
Translates to: CEHRMALEGYGDPGCFRRPSCQG*REGGCP
Trigger: AGGGCACCCTCCTTCTCTGCACCCTTGGCACGAGGG...CCTCCTGAAGCACCCAGGGTCTCCATAACCTTCCAGAGCCATCCTGTGTTCACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355552.8
ENST00000648957.1
CDS-3UTR GCA 90 bp ATCCACCATGGTGGATGCTTTGAGGAGGCCAAAGCACCATGGGGATGGGATGGACCAGCCCTGCCCTCGTaGCAAGGGTGCAGAGAAGGA +
Preference number: 4 (lower is better)
Translates to: IHHGGCFEEAKAPWGWDGPALPS*QGCREG
Trigger: TCCTTCTCTGCACCCTTGGCACGAGGGCAGGGCTGG...TCCATCCCATCCCCATGGTGCTTTGGCCTCCTCAAAGCATCCACCATGGTGGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000648957.1
CDS-3UTR GCA 90 bp GGCCACACAGGGCTACTGCCCACAGAACGTCCCTTGACCTGGTCCTCCTCCCCTATCCACCATGGTGGATaGTTTGAGGAGGCCAAAGCA +
Preference number: 4 (lower is better)
Translates to: GHTGLLPTERPLTWSSSPIHHGG*FEEAKA
Trigger: TGCTTTGGCCTCCTCAAAGCATCCACCATGGTGGAT...AGGGGAGGAGGACCAGGTCAAGGGACGTTCTGTGGGCAGTAGCCCTGTGTGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000648957.1
CDS-3UTR GCA 90 bp CCTTACCCCGCTCACTCAGAATGCCGTGAGCTTGCCTTCCCTGATTACCAGGCTACACTCCCCAGCCCCTaGAGTAGGTTGAGCAGTGCC +
Preference number: 4 (lower is better)
Translates to: PYPAHSECRELAFPDYQATLPSP*SRLSSA
Trigger: GGCACTGCTCAACCTACTGCAGGGGCTGGGGAGTGT...AGCCTGGTAATCAGGGAAGGCAAGCTCACGGCATTCTGAGTGAGCGGGGTAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355552.8
ENST00000648957.1
CDS-3UTR GCA 90 bp TCCAGACTCATGGTGGGAACAGGGCCACACAGGGCTACTGCCCACAGAACGTCCCCTTACAAAAGGCCCTaGAGGATGGGTCTTCTCCGC +
Preference number: 4 (lower is better)
Translates to: SRLMVGTGPHRATAHRTSPYKRP*RMGLLR
Trigger: GCGGAGAAGACCCATCCTGCAGGGCCTTTTGTAAGG...GGACGTTCTGTGGGCAGTAGCCCTGTGTGGCCCTGTTCCCACCATGAGTCTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355552.8
ENST00000648957.1
CDS-3UTR GCA 90 bp GACTCATGGTGGGAACAGGGCCACACAGGGCTACTGCCCACAGAACGTCCCTTGCCAGGCTCTGAAGCATaGAGTTGGCTGTGTCCTGGA +
Preference number: 4 (lower is better)
Translates to: DSWWEQGHTGLLPTERPLPGSEA*SWLCPG
Trigger: TCCAGGACACAGCCAACTGCATGCTTCAGAGCCTGG...CAAGGGACGTTCTGTGGGCAGTAGCCCTGTGTGGCCCTGTTCCCACCATGAGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355552.8
ENST00000648957.1
CDS-3UTR GCA 90 bp GGGATTGGGAGCCCCAGGGAGGTGGGGCCTCCAGACTCATGGTGGGAACAGGGCGACAGAGGAATTCAGTaGCACACAGGGAGATTTATC +
Preference number: 4 (lower is better)
Translates to: GIGSPREVGPPDSWWEQGDRGIQ*HTGRFI
Trigger: GATAAATCTCCCTGTGTGGCACTGAATTCCTCTGTC...GCCCTGTTCCCACCATGAGTCTGGAGGCCCCACCTCCCTGGGGCTCCCAATCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355552.8
ENST00000648957.1
CDS-3UTR CCA 90 bp CCCTGGAAGGAAAGCCTGGGCCATGTCACTGAGCAGTATGAGAGCAGGTGGGAAAGGTGCTCACCGTCATaGATACCACGGCCCGGGCAA +
Preference number: 4 (lower is better)
Translates to: PWKESLGHVTEQYESRWERCSPS*IPRPGQ
Trigger: TTGCCCGGGCCGTGGTATCCATGACGGTGAGCACCT...TTCCCACCTGCTCTCATACTGCTCAGTGACATGGCCCAGGCTTTCCTTCCAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000483868.5
ENST00000489960.5
ENST00000648957.1
CDS-3UTR CCA 90 bp GAAGCCCCGGAGGAAAGCCACGTAGATGAGCGGAGCGAAGAAGCTGAAGTACAGAGGTGCTCACCGTCATaGATACCACGGCCCGGGCAA +
Preference number: 4 (lower is better)
Translates to: EAPEESHVDERSEEAEVQRCSPS*IPRPGQ
Trigger: TTGCCCGGGCCGTGGTATCCATGACGGTGAGCACCT...CTGTACTTCAGCTTCTTCGCTCCGCTCATCTACGTGGCTTTCCTCCGGGGCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393400.6
ENST00000483868.5
CDS-3UTR CCA 90 bp CTCCAGACTCATGGTGGGAACAGGGCCACACAGGGCTACTGCCCACAGAACGTCAGGAGAAGAGGATCTTaGGCTCCGAGCCGAAGAAGC +
Preference number: 4 (lower is better)
Translates to: LQTHGGNRATQGYCPQNVRRRGS*APSRRS
Trigger: GCTTCTTCGGCTCGGAGCCCAAGATCCTCTTCTCCT...GACGTTCTGTGGGCAGTAGCCCTGTGTGGCCCTGTTCCCACCATGAGTCTGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000483868.5
ENST00000489960.5
ENST00000648957.1
CDS-3UTR CCA 90 bp GACTCATGGTGGGAACAGGGCCACACAGGGCTACTGCCCACAGAACGTCCCTTGCAGTGTGGCAGGGCATaGAAGCGATGTCATCCAGGT +
Preference number: 4 (lower is better)
Translates to: DSWWEQGHTGLLPTERPLQCGRA*KRCHPG
Trigger: ACCTGGATGACATCGCTTCCATGCCCTGCCACACTG...CAAGGGACGTTCTGTGGGCAGTAGCCCTGTGTGGCCCTGTTCCCACCATGAGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000483868.5
ENST00000489960.5
ENST00000648957.1
CDS-3UTR CCA 90 bp GGCCCTGGAAGGAAAGCCTGGGCCATGTCACTGAGCAGTATGAGAGCAGGTGGGCAGTGTGGCAGGGCATaGAAGCGATGTCATCCAGGT +
Preference number: 4 (lower is better)
Translates to: GPGRKAWAMSLSSMRAGGQCGRA*KRCHPG
Trigger: ACCTGGATGACATCGCTTCCATGCCCTGCCACACTG...CCCACCTGCTCTCATACTGCTCAGTGACATGGCCCAGGCTTTCCTTCCAGGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000483868.5
ENST00000489960.5
ENST00000648957.1
CDS-3UTR CCA 90 bp AGCCTGGGCCATGTCACTGAGCAGTATGAGAGCAGGTGGGAAGGGGAGGAGGGTTTGATGCTGCCAGTGTaGCAGGGCATGGAAGCGATG +
Preference number: 4 (lower is better)
Translates to: SLGHVTEQYESRWEGEEGLMLPV*QGMEAM
Trigger: CATCGCTTCCATGCCCTGCCACACTGGCAGCATCAA...ACCCTCCTCCCCTTCCCACCTGCTCTCATACTGCTCAGTGACATGGCCCAGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000483868.5
ENST00000489960.5
ENST00000648957.1
CDS-3UTR CCA 90 bp CTTCAGTCCATCCACCATGGTGGATGCTTTGAGGAGGCCAAAGCACCATGGGGAGTCCTCCACAGGCCCTaGCAGCTGCCCTCAGGCATT +
Preference number: 4 (lower is better)
Translates to: LQSIHHGGCFEEAKAPWGVLHRP*QLPSGI
Trigger: AATGCCTGAGGGCAGCTGCCAGGGCCTGTGGAGGAC...TCCCCATGGTGCTTTGGCCTCCTCAAAGCATCCACCATGGTGGATGGACTGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000648957.1
CDS-3UTR CCA 90 bp CAGGGACAAGTGGGCCCCTCTCCCCTACTCATGCCTTATGATCCCAGTGCTTTGCCTCCAGACTCATGGTaGGAACAGGGCCACACAGGG +
Preference number: 4 (lower is better)
Translates to: QGQVGPSPLLMPYDPSALPPDSW*EQGHTG
Trigger: CCCTGTGTGGCCCTGTTCCCACCATGAGTCTGGAGG...CAAAGCACTGGGATCATAAGGCATGAGTAGGGGAGAGGGGCCCACTTGTCCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355552.8
ENST00000648957.1
CDS-3UTR CCA 90 bp GAAGCCCCGGAGGAAAGCCACGTAGATGAGCGGAGCGAAGAAGCTGAAGTACAGCCTCCAGACTCATGGTaGGAACAGGGCCACACAGGG +
Preference number: 4 (lower is better)
Translates to: EAPEESHVDERSEEAEVQPPDSW*EQGHTG
Trigger: CCCTGTGTGGCCCTGTTCCCACCATGAGTCTGGAGG...CTGTACTTCAGCTTCTTCGCTCCGCTCATCTACGTGGCTTTCCTCCGGGGCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393400.6
ENST00000483868.5
CDS-3UTR CCA 90 bp CCCTGGAAGGAAAGCCTGGGCCATGTCACTGAGCAGTATGAGAGCAGGTGGGAAGGGCCTCCAGACTCATaGTGGGAACAGGGCCACACA +
Preference number: 4 (lower is better)
Translates to: PWKESLGHVTEQYESRWEGPPDS*WEQGHT
Trigger: TGTGTGGCCCTGTTCCCACCATGAGTCTGGAGGCCC...TTCCCACCTGCTCTCATACTGCTCAGTGACATGGCCCAGGCTTTCCTTCCAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000483868.5
ENST00000489960.5
ENST00000648957.1
CDS-3UTR CCA 90 bp AGTCCATCCACCATGGTGGATGCTTTGAGGAGGCCAAAGCACCATGGGGATGGGGGGCCTCCAGACTCATaGTGGGAACAGGGCCACACA +
Preference number: 4 (lower is better)
Translates to: SPSTMVDALRRPKHHGDGGPPDS*WEQGHT
Trigger: TGTGTGGCCCTGTTCCCACCATGAGTCTGGAGGCCC...CCCATCCCCATGGTGCTTTGGCCTCCTCAAAGCATCCACCATGGTGGATGGACT
59% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000648957.1
CDS-3UTR CCA 90 bp ACACTTCAGTCCATCCACCATGGTGGATGCTTTGAGGAGGCCAAAGCACCATGGGGAGCCCCAGGGAGGTaGGGCCTCCAGACTCATGGT +
Preference number: 4 (lower is better)
Translates to: TLQSIHHGGCFEEAKAPWGAPGR*GLQTHG
Trigger: ACCATGAGTCTGGAGGCCCCACCTCCCTGGGGCTCC...CCATGGTGCTTTGGCCTCCTCAAAGCATCCACCATGGTGGATGGACTGAAGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000648957.1
CDS-3UTR CCA 90 bp CACTTCAGTCCATCCACCATGGTGGATGCTTTGAGGAGGCCAAAGCACCATGGGGATGGCAAAGGGGATTaGGAGCCCCAGGGAGGTGGG +
Preference number: 4 (lower is better)
Translates to: HFSPSTMVDALRRPKHHGDGKGD*EPQGGG
Trigger: CCCACCTCCCTGGGGCTCCCAATCCCCTTTGCCATC...CCCATGGTGCTTTGGCCTCCTCAAAGCATCCACCATGGTGGATGGACTGAAGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000648957.1
CDS-3UTR CCA 90 bp TCCAGACTCATGGTGGGAACAGGGCCACACAGGGCTACTGCCCACAGAACGTCCCAACCTTGCCAAGCATaGCCCTGGAAGGAAAGCCTG +
Preference number: 4 (lower is better)
Translates to: SRLMVGTGPHRATAHRTSQPCQA*PWKESL
Trigger: CAGGCTTTCCTTCCAGGGCCATGCTTGGCAAGGTTG...GGACGTTCTGTGGGCAGTAGCCCTGTGTGGCCCTGTTCCCACCATGAGTCTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000483868.5
ENST00000489960.5
ENST00000648957.1
CDS-3UTR CCA 90 bp TGCCCTCAGGCATTGATGGCCTTCCAGCGCTCGCTGTCTGTGCTGTTGATGCTGACCATGGGGATGGGATaGAGGCATTGGGAGAGCCAG +
Preference number: 4 (lower is better)
Translates to: CPQALMAFQRSLSVLLMLTMGMG*RHWESQ
Trigger: CTGGCTCTCCCAATGCCTCCATCCCATCCCCATGGT...CAGCATCAACAGCACAGACAGCGAGCGCTGGAAGGCCATCAATGCCTGAGGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296210.11
ENST00000393400.6
ENST00000483868.5
CDS-3UTR CCA 90 bp CATTGGCCCCACAGACATGAGCTGTGTTGGAGCTTGTGCCCTCGGCACCCCATTAGGAGTCCAGCTCACTaGCCGTACTGTTGGCCCTGT +
Preference number: 4 (lower is better)
Translates to: HWPHRHELCWSLCPRHPIRSPAH*PYCWPC
Trigger: ACAGGGCCAACAGTACGGCCAGTGAGCTGGACTCCT...AATGGGGTGCCGAGGGCACAAGCTCCAACACAGCTCATGTCTGTGGGGCCAATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355552.8
ENST00000648957.1
CDS-3UTR CCA 90 bp GGAAGGAAAGCCTGGGCCATGTCACTGAGCAGTATGAGAGCAGGTGGGAAGGGGAGGTTATGGAGACCCTaGGTGCTTCAGGAGGGGGAC +
Preference number: 4 (lower is better)
Translates to: GRKAWAMSLSSMRAGGKGRLWRP*VLQEGD
Trigger: GTCCCCCTCCTGAAGCACCCAGGGTCTCCATAACCT...CCCCTTCCCACCTGCTCTCATACTGCTCAGTGACATGGCCCAGGCTTTCCTTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355552.8
ENST00000648957.1
CDS-3UTR CCA 90 bp GGGAGAGCCAGCCCTGCCCTCGTGCCAAGGGTGCAGAGAAGGAGGGTGCCCTCAGTCCTCCACTTGACATaGAATGATCTCCAAGATCCA +
Preference number: 4 (lower is better)
Translates to: GRASPALVPRVQRRRVPSVLHLT*NDLQDP
Trigger: TGGATCTTGGAGATCATTCCATGTCAAGTGGAGGAC...TGAGGGCACCCTCCTTCTCTGCACCCTTGGCACGAGGGCAGGGCTGGCTCTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355552.8
ENST00000648957.1
CDS-3UTR CCA 90 bp GACTCATGGTGGGAACAGGGCCACACAGGGCTACTGCCCACAGAACGTCCCTTGTCAGCAAAATGGCCCTaGTGTGACCGAGGTCACGCA +
Preference number: 4 (lower is better)
Translates to: DSWWEQGHTGLLPTERPLSAKWP*CDRGHA
Trigger: TGCGTGACCTCGGTCACACCAGGGCCATTTTGCTGA...CAAGGGACGTTCTGTGGGCAGTAGCCCTGTGTGGCCCTGTTCCCACCATGAGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648957.1
CDS-3UTR CCA 90 bp GGAAGGAAAGCCTGGGCCATGTCACTGAGCAGTATGAGAGCAGGTGGGAAGGGGTACGCGCCTTCCAGCTaGCAGCAGTTGTCAGTGGAC +
Preference number: 4 (lower is better)
Translates to: GRKAWAMSLSSMRAGGKGYAPSS*QQLSVD
Trigger: GTCCACTGACAACTGCTGCCAGCTGGAAGGCGCGTA...CCCCTTCCCACCTGCTCTCATACTGCTCAGTGACATGGCCCAGGCTTTCCTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489960.5
CDS-3UTR CCA 90 bp CTTCAGTCCATCCACCATGGTGGATGCTTTGAGGAGGCCAAAGCACCATGGGGACAGCTGCCCCAGCGCTaGATGCCTACTGACCTGGGA +
Preference number: 4 (lower is better)
Translates to: LQSIHHGGCFEEAKAPWGQLPQR*MPTDLG
Trigger: TCCCAGGTCAGTAGGCATCCAGCGCTGGGGCAGCTG...TCCCCATGGTGCTTTGGCCTCCTCAAAGCATCCACCATGGTGGATGGACTGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648957.1
CDS-3UTR TCA 90 bp GGCCCTGGAAGGAAAGCCTGGGCCATGTCACTGAGCAGTATGAGAGCAGGTGGGTCCAGAGCAGGAAGATaGGGAAGAGCACATTGGGGA +
Preference number: 4 (lower is better)
Translates to: GPGRKAWAMSLSSMRAGGSRAGR*GRAHWG
Trigger: TCCCCAATGTGCTCTTCCTCATCTTCCTGCTCTGGA...CCCACCTGCTCTCATACTGCTCAGTGACATGGCCCAGGCTTTCCTTCCAGGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000483868.5
ENST00000489960.5
ENST00000648957.1
CDS-3UTR TCA 90 bp TCCATCCACCATGGTGGATGCTTTGAGGAGGCCAAAGCACCATGGGGATGGGATAAATGGGGCTGGAGGTaGTGCGGATCTTCGCCCGAG +
Preference number: 4 (lower is better)
Translates to: SIHHGGCFEEAKAPWGWDKWGWR*CGSSPE
Trigger: CTCGGGCGAAGATCCGCATCACCTCCAGCCCCATTT...ATCCCATCCCCATGGTGCTTTGGCCTCCTCAAAGCATCCACCATGGTGGATGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000648957.1
CDS-3UTR TCA 90 bp ATCCACCATGGTGGATGCTTTGAGGAGGCCAAAGCACCATGGGGATGGGATGGAAGGCCAGGCCCAGGATaGTCACACTCAGCTCGATGG +
Preference number: 4 (lower is better)
Translates to: IHHGGCFEEAKAPWGWDGRPGPG*SHSARW
Trigger: CCATCGAGCTGAGTGTGATCATCCTGGGCCTGGCCT...TCCATCCCATCCCCATGGTGCTTTGGCCTCCTCAAAGCATCCACCATGGTGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000648957.1
CDS-3UTR TCA 90 bp AGGGCTGGGGTAGGTGTACATCTGGCTCCTCTGTCTCGTCCACTTGGCATTTGTAGGCCAGGCCCAGGATaGTCACACTCAGCTCGATGG +
Preference number: 4 (lower is better)
Translates to: RAGVGVHLAPLSRPLGICRPGPG*SHSARW
Trigger: CCATCGAGCTGAGTGTGATCATCCTGGGCCTGGCCT...ACAAATGCCAAGTGGACGAGACAGAGGAGCCAGATGTACACCTACCCCAGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393400.6
ENST00000483868.5
CDS-3UTR TCA 90 bp AGCTGCCCTCAGGCATTGATGGCCTTCCAGCGCTCGCTGTCTGTGCTGTTGATGGCGGAGCGAAGAAGCTaGAGTACAGGAAGGTTGTGG +
Preference number: 4 (lower is better)
Translates to: SCPQALMAFQRSLSVLLMAERRS*STGRLW
Trigger: CCACAACCTTCCTGTACTTCAGCTTCTTCGCTCCGC...CATCAACAGCACAGACAGCGAGCGCTGGAAGGCCATCAATGCCTGAGGGCAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296210.11
ENST00000393400.6
ENST00000483868.5
CDS-3UTR TCA 90 bp CTTCAGTCCATCCACCATGGTGGATGCTTTGAGGAGGCCAAAGCACCATGGGGACGCTGTCTGTGCTGTTaGTGCTGCCAGTGTGGCAGG +
Preference number: 4 (lower is better)
Translates to: LQSIHHGGCFEEAKAPWGRCLCC*CCQCGR
Trigger: CCTGCCACACTGGCAGCATCAACAGCACAGACAGCG...TCCCCATGGTGCTTTGGCCTCCTCAAAGCATCCACCATGGTGGATGGACTGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000648957.1
CDS-3UTR TCA 90 bp TGCCCTCAGGCATTGATGGCCTTCCAGCGCTCGCTGTCTGTGCTGTTGATGCTGCCATGGTGGATGCTTTaGGGAGGCCAAAGCACCATG +
Preference number: 4 (lower is better)
Translates to: CPQALMAFQRSLSVLLMLPWWML*GGQSTM
Trigger: CATGGTGCTTTGGCCTCCTCAAAGCATCCACCATGG...CAGCATCAACAGCACAGACAGCGAGCGCTGGAAGGCCATCAATGCCTGAGGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296210.11
ENST00000393400.6
ENST00000483868.5
CDS-3UTR TCA 90 bp GGAAGGAAAGCCTGGGCCATGTCACTGAGCAGTATGAGAGCAGGTGGGAAGGGGCCATGGTGGATGCTTTaGGGAGGCCAAAGCACCATG +
Preference number: 4 (lower is better)
Translates to: GRKAWAMSLSSMRAGGKGPWWML*GGQSTM
Trigger: CATGGTGCTTTGGCCTCCTCAAAGCATCCACCATGG...CCCCTTCCCACCTGCTCTCATACTGCTCAGTGACATGGCCCAGGCTTTCCTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000483868.5
ENST00000648957.1
CDS-3UTR TCA 90 bp CCACACAGGGCTACTGCCCACAGAACGTCCCTTGACCTGGTCCTCCTCCCCTGGCCCAGTGCTTTGCTCTaGTTTACTCCCATTTTCAGC +
Preference number: 4 (lower is better)
Translates to: PHRATAHRTSLDLVLLPWPSALL*FTPIFS
Trigger: GCTGAAAATGGGAGTAAATCAGAGCAAAGCACTGGG...CCAGGGGAGGAGGACCAGGTCAAGGGACGTTCTGTGGGCAGTAGCCCTGTGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355552.8
ENST00000648957.1
CDS-3UTR TCA 90 bp CTTCAGTCCATCCACCATGGTGGATGCTTTGAGGAGGCCAAAGCACCATGGGGAGACCTCCCCAGGCTCTaGAGCATGCAGTTGGCTGTG +
Preference number: 4 (lower is better)
Translates to: LQSIHHGGCFEEAKAPWGDLPRL*SMQLAV
Trigger: CACAGCCAACTGCATGCTTCAGAGCCTGGGGAGGTC...TCCCCATGGTGCTTTGGCCTCCTCAAAGCATCCACCATGGTGGATGGACTGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355552.8
ENST00000648957.1
CDS-3UTR TCA 90 bp GCCCTCAGGCTCCTGAAAGGAACCAGCCCCAGTATTCCTGCAAAACCTCCACATAAAATGGCCCTGGTGTaGCCGAGGTCACGCAGCCAG +
Preference number: 4 (lower is better)
Translates to: ALRLLKGTSPSIPAKPPHKMALV*PRSRSQ
Trigger: CTGGCTGCGTGACCTCGGTCACACCAGGGCCATTTT...ATGTGGAGGTTTTGCAGGAATACTGGGGCTGGTTCCTTTCAGGAGCCTGAGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000648957.1
CDS-3UTR TCA 90 bp AGTCCATCCACCATGGTGGATGCTTTGAGGAGGCCAAAGCACCATGGGGATGGGCCCCATCCACCATCTTaGCTGCTCTCTTCAGTGGCC +
Preference number: 4 (lower is better)
Translates to: SPSTMVDALRRPKHHGDGPHPPS*LLSSVA
Trigger: GGCCACTGAAGAGAGCAGTCAAGATGGTGGATGGGG...CCCATCCCCATGGTGCTTTGGCCTCCTCAAAGCATCCACCATGGTGGATGGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648957.1
CDS-3UTR GCA 90 bp CACTTCAGTCCATCCACCATGGTGGATGCTTTGAGGAGGCCAAAGCACCATGGGGTGGGGGTAGCGCTGTaGTCCCATTGGCCCAAGTCA +
Preference number: 4 (lower is better)
Translates to: HFSPSTMVDALRRPKHHGVGVAL*SHWPKS
Trigger: TGACTTGGGCCAATGGGAGCACAGCGCTACCCCCAC...CCCATGGTGCTTTGGCCTCCTCAAAGCATCCACCATGGTGGATGGACTGAAGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000648957.1
CDS-3UTR GCA 90 bp AACTCCCTTTCACTCTGGCTGCCAAAAAGCTCAAAGCCGAACTCAGGTACAAGGCCACGGCCCGGGCAATaGCCACCAGCGCCACCACAA +
Preference number: 4 (lower is better)
Translates to: NSLSLWLPKSSKPNSGTRPRPGQ*PPAPPQ
Trigger: TTGTGGTGGCGCTGGTGGGCATTGCCCGGGCCGTGG...CCTTGTACCTGAGTTCGGCTTTGAGCTTTTTGGCAGCCAGAGTGAAAGGGAGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355552.8
ENST00000648957.1
CDS-3UTR GCA 90 bp GCGCTCGCTGTCTGTGCTGTTGATGCTGCCAGTGTGGCAGGGCATGGAAGCGATTTGCAGCGTTCGAGGTaGTCACCGTCATGGATACCA +
Preference number: 4 (lower is better)
Translates to: ALAVCAVDAASVAGHGSDLQRSR*SPSWIP
Trigger: TGGTATCCATGACGGTGAGCACCTCGAACGCTGCAA...ATCGCTTCCATGCCCTGCCACACTGGCAGCATCAACAGCACAGACAGCGAGCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296210.11
ENST00000393400.6
ENST00000483868.5
CDS-3UTR GCA 90 bp ACACTTCAGTCCATCCACCATGGTGGATGCTTTGAGGAGGCCAAAGCACCATGGCCAGCCCTGCCCTCGTaGCAAGGGTGCAGAGAAGGA +
Preference number: 4 (lower is better)
Translates to: TLQSIHHGGCFEEAKAPWPALPS*QGCREG
Trigger: TCCTTCTCTGCACCCTTGGCACGAGGGCAGGGCTGG...CCATGGTGCTTTGGCCTCCTCAAAGCATCCACCATGGTGGATGGACTGAAGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000648957.1
CDS-3UTR GCA 90 bp CACTTCAGTCCATCCACCATGGTGGATGCTTTGAGGAGGCCAAAGCACCATGGGGAGAAGGCAGGGAGATaGGCTCCTTCAGCGGGGTCT +
Preference number: 4 (lower is better)
Translates to: HFSPSTMVDALRRPKHHGEKAGR*APSAGS
Trigger: AGACCCCGCTGAAGGAGCGCATCTCCCTGCCTTCTC...CCCATGGTGCTTTGGCCTCCTCAAAGCATCCACCATGGTGGATGGACTGAAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355552.8
ENST00000450633.6
ENST00000648957.1
CDS-3UTR GCA 90 bp CACTTCAGTCCATCCACCATGGTGGATGCTTTGAGGAGGCCAAAGCACCATGGGACACTCCCCAGCCCCTaGAGTAGGTTGAGCAGTGCC +
Preference number: 4 (lower is better)
Translates to: HFSPSTMVDALRRPKHHGTLPSP*SRLSSA
Trigger: GGCACTGCTCAACCTACTGCAGGGGCTGGGGAGTGT...CCCATGGTGCTTTGGCCTCCTCAAAGCATCCACCATGGTGGATGGACTGAAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000648957.1
CDS-3UTR GCA 90 bp CACTTCAGTCCATCCACCATGGTGGATGCTTTGAGGAGGCCAAAGCACCATGGGCTGTGTTGGAGCTTGTaGCCTCGGCACCCCATTCCC +
Preference number: 4 (lower is better)
Translates to: HFSPSTMVDALRRPKHHGLCWSL*PRHPIP
Trigger: GGGAATGGGGTGCCGAGGGCACAAGCTCCAACACAG...CCCATGGTGCTTTGGCCTCCTCAAAGCATCCACCATGGTGGATGGACTGAAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355552.8
ENST00000648957.1
CDS-3UTR GCA 90 bp CCCTGGAAGGAAAGCCTGGGCCATGTCACTGAGCAGTATGAGAGCAGGTGGGAACCCGCTCACTCAGAATaGCGTGAGCTTGCCTTCCCT +
Preference number: 4 (lower is better)
Translates to: PWKESLGHVTEQYESRWEPAHSE*RELAFP
Trigger: AGGGAAGGCAAGCTCACGGCATTCTGAGTGAGCGGG...TTCCCACCTGCTCTCATACTGCTCAGTGACATGGCCCAGGCTTTCCTTCCAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355552.8
ENST00000648957.1
CDS-3UTR GCA 90 bp GACTCATGGTGGGAACAGGGCCACACAGGGCTACTGCCCACAGAACGTCCCTTGCTGTTGATGCCTCTCTaGTCATTCACTGCAGCCAGC +
Preference number: 4 (lower is better)
Translates to: DSWWEQGHTGLLPTERPLLLMPL*SFTAAS
Trigger: GCTGGCTGCAGTGAATGAGCAGAGAGGCATCAACAG...CAAGGGACGTTCTGTGGGCAGTAGCCCTGTGTGGCCCTGTTCCCACCATGAGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355552.8
ENST00000648957.1
CDS-3UTR CCA 90 bp CCCTGGAAGGAAAGCCTGGGCCATGTCACTGAGCAGTATGAGAGCAGGTGGGAATCACACTCAGCTCGATaGCCAGCAGGAAGAAGCGGG +
Preference number: 4 (lower is better)
Translates to: PWKESLGHVTEQYESRWESHSAR*PAGRSG
Trigger: CCCGCTTCTTCCTGCTGGCCATCGAGCTGAGTGTGA...TTCCCACCTGCTCTCATACTGCTCAGTGACATGGCCCAGGCTTTCCTTCCAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000483868.5
ENST00000489960.5
ENST00000648957.1
CDS-3UTR CCA 90 bp CACTTCAGTCCATCCACCATGGTGGATGCTTTGAGGAGGCCAAAGCACCATGGGGACTTACTCTCCAGGTaGCCAAAGGCCAGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: HFSPSTMVDALRRPKHHGDLLSR*PKARPR
Trigger: CCTGGGCCTGGCCTTTGGCCACCTGGAGAGTAAGTC...CCCATGGTGCTTTGGCCTCCTCAAAGCATCCACCATGGTGGATGGACTGAAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000648957.1
CDS-3UTR CCA 90 bp GAAGCATGCAGTTGGCTGTGTCCTGGATGGGCTCCTCCTCTCCAACTCTGGGGACAGTGTGGCAGGGCATaGAAGCGATGTCATCCAGGT +
Preference number: 4 (lower is better)
Translates to: EACSWLCPGWAPPLQLWGQCGRA*KRCHPG
Trigger: ACCTGGATGACATCGCTTCCATGCCCTGCCACACTG...TCCCCAGAGTTGGAGAGGAGGAGCCCATCCAGGACACAGCCAACTGCATGCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355552.8
ENST00000648957.1
CDS-3UTR CCA 90 bp CACTGCAGCCAGCAAACTTCGGCTGACACTGTGCCATCTTGGACTGCATGTGGACAGTATGAGAGCAGGTaGGAAGGGGAGGAGGGTCCC +
Preference number: 4 (lower is better)
Translates to: HCSQQTSADTVPSWTACGQYESR*EGEEGP
Trigger: GGGACCCTCCTCCCCTTCCCACCTGCTCTCATACTG...TCCACATGCAGTCCAAGATGGCACAGTGTCAGCCGAAGTTTGCTGGCTGCAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355552.8
ENST00000648957.1
CDS-3UTR CCA 90 bp ATCCACCATGGTGGATGCTTTGAGGAGGCCAAAGCACCATGGGGATGGGATGGACAGTATGAGAGCAGGTaGGAAGGGGAGGAGGGTCCC +
Preference number: 4 (lower is better)
Translates to: IHHGGCFEEAKAPWGWDGQYESR*EGEEGP
Trigger: GGGACCCTCCTCCCCTTCCCACCTGCTCTCATACTG...TCCATCCCATCCCCATGGTGCTTTGGCCTCCTCAAAGCATCCACCATGGTGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000648957.1
CDS-3UTR CCA 90 bp TGCCCTCAGGCATTGATGGCCTTCCAGCGCTCGCTGTCTGTGCTGTTGATGCTGCCTGGAAGGAAAGCCTaGGCCATGTCACTGAGCAGT +
Preference number: 4 (lower is better)
Translates to: CPQALMAFQRSLSVLLMLPGRKA*AMSLSS
Trigger: ACTGCTCAGTGACATGGCCCAGGCTTTCCTTCCAGG...CAGCATCAACAGCACAGACAGCGAGCGCTGGAAGGCCATCAATGCCTGAGGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296210.11
ENST00000393400.6
ENST00000483868.5
CDS-3UTR CCA 90 bp GGAAGGAAAGCCTGGGCCATGTCACTGAGCAGTATGAGAGCAGGTGGGAAGGGGCCTGGAAGGAAAGCCTaGGCCATGTCACTGAGCAGT +
Preference number: 4 (lower is better)
Translates to: GRKAWAMSLSSMRAGGKGPGRKA*AMSLSS
Trigger: ACTGCTCAGTGACATGGCCCAGGCTTTCCTTCCAGG...CCCCTTCCCACCTGCTCTCATACTGCTCAGTGACATGGCCCAGGCTTTCCTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000483868.5
ENST00000489960.5
ENST00000648957.1
CDS-3UTR CCA 90 bp CCCTGGAAGGAAAGCCTGGGCCATGTCACTGAGCAGTATGAGAGCAGGTGGGAAACCATGGGGATGGGATaGAGGCATTGGGAGAGCCAG +
Preference number: 4 (lower is better)
Translates to: PWKESLGHVTEQYESRWETMGMG*RHWESQ
Trigger: CTGGCTCTCCCAATGCCTCCATCCCATCCCCATGGT...TTCCCACCTGCTCTCATACTGCTCAGTGACATGGCCCAGGCTTTCCTTCCAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000483868.5
ENST00000489960.5
ENST00000648957.1
CDS-3UTR CCA 90 bp GACTCATGGTGGGAACAGGGCCACACAGGGCTACTGCCCACAGAACGTCCCTTGAAAGCACCATGGGGATaGGATGGAGGCATTGGGAGA +
Preference number: 4 (lower is better)
Translates to: DSWWEQGHTGLLPTERPLKAPWG*DGGIGR
Trigger: TCTCCCAATGCCTCCATCCCATCCCCATGGTGCTTT...CAAGGGACGTTCTGTGGGCAGTAGCCCTGTGTGGCCCTGTTCCCACCATGAGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000483868.5
ENST00000489960.5
ENST00000648957.1
CDS-3UTR CCA 90 bp CCAACCCTTACCCCGCTCACTCAGAATGCCGTGAGCTTGCCTTCCCTGATTACCAGGGGCAGCGGCAGCTaGGATCCTGTTTCTCTTCAC +
Preference number: 4 (lower is better)
Translates to: PTLTPLTQNAVSLPSLITRGSGS*DPVSLH
Trigger: GTGAAGAGAAACAGGATCCCAGCTGCCGCTGCCCCT...GGTAATCAGGGAAGGCAAGCTCACGGCATTCTGAGTGAGCGGGGTAAGGGTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355552.8
ENST00000648957.1
CDS-3UTR CCA 90 bp GCCCTCAGGCTCCTGAAAGGAACCAGCCCCAGTATTCCTGCAAAACCTCCACATAGTGGCAGGGACAAGTaGGCCCCTCTCCCCTACTCA +
Preference number: 4 (lower is better)
Translates to: ALRLLKGTSPSIPAKPPHSGRDK*APLPYS
Trigger: TGAGTAGGGGAGAGGGGCCCACTTGTCCCTGCCACT...ATGTGGAGGTTTTGCAGGAATACTGGGGCTGGTTCCTTTCAGGAGCCTGAGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000355552.8
ENST00000648957.1
CDS-3UTR CCA 90 bp ATCCACCATGGTGGATGCTTTGAGGAGGCCAAAGCACCATGGGGATGGGATGGAAGTGGCAGGGACAAGTaGGCCCCTCTCCCCTACTCA +
Preference number: 4 (lower is better)
Translates to: IHHGGCFEEAKAPWGWDGSGRDK*APLPYS
Trigger: TGAGTAGGGGAGAGGGGCCCACTTGTCCCTGCCACT...TCCATCCCATCCCCATGGTGCTTTGGCCTCCTCAAAGCATCCACCATGGTGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355552.8
ENST00000648957.1
CDS-3UTR CCA 90 bp AGCCTGGGCCATGTCACTGAGCAGTATGAGAGCAGGTGGGAAGGGGAGGAGGGTTCTGAAGCATGCAGTTaGCTGTGTCCTGGATGGGCT +
Preference number: 4 (lower is better)
Translates to: SLGHVTEQYESRWEGEEGSEACS*LCPGWA
Trigger: AGCCCATCCAGGACACAGCCAACTGCATGCTTCAGA...ACCCTCCTCCCCTTCCCACCTGCTCTCATACTGCTCAGTGACATGGCCCAGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355552.8
ENST00000648957.1
CDS-3UTR CCA 90 bp CCTTACCCCGCTCACTCAGAATGCCGTGAGCTTGCCTTCCCTGATTACCAGGCTGGGAGCCTGACACATTaGCCCCACAGACATGAGCTG +
Preference number: 4 (lower is better)
Translates to: PYPAHSECRELAFPDYQAGSLTH*PHRHEL
Trigger: CAGCTCATGTCTGTGGGGCCAATGTGTCAGGCTCCC...AGCCTGGTAATCAGGGAAGGCAAGCTCACGGCATTCTGAGTGAGCGGGGTAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355552.8
ENST00000648957.1
CDS-3UTR CCA 90 bp CCAACCCTTACCCCGCTCACTCAGAATGCCGTGAGCTTGCCTTCCCTGATTACCGGGAGCCTGACACATTaGCCCCACAGACATGAGCTG +
Preference number: 4 (lower is better)
Translates to: PTLTPLTQNAVSLPSLITGSLTH*PHRHEL
Trigger: CAGCTCATGTCTGTGGGGCCAATGTGTCAGGCTCCC...GGTAATCAGGGAAGGCAAGCTCACGGCATTCTGAGTGAGCGGGGTAAGGGTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355552.8
ENST00000648957.1
CDS-3UTR CCA 90 bp CCAACCCTTACCCCGCTCACTCAGAATGCCGTGAGCTTGCCTTCCCTGATTACCCACTGGCCGTACTGTTaGCCCTGTCCGCTATCAACC +
Preference number: 4 (lower is better)
Translates to: PTLTPLTQNAVSLPSLITHWPYC*PCPLST
Trigger: GGTTGATAGCGGACAGGGCCAACAGTACGGCCAGTG...GGTAATCAGGGAAGGCAAGCTCACGGCATTCTGAGTGAGCGGGGTAAGGGTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355552.8
ENST00000648957.1
CDS-3UTR CCA 90 bp CTCCAGACTCATGGTGGGAACAGGGCCACACAGGGCTACTGCCCACAGAACGTCGTCTTGTCAGCAAAATaGCCCTGGTGTGACCGAGGT +
Preference number: 4 (lower is better)
Translates to: LQTHGGNRATQGYCPQNVVLSAK*PWCDRG
Trigger: ACCTCGGTCACACCAGGGCCATTTTGCTGACAAGAC...GACGTTCTGTGGGCAGTAGCCCTGTGTGGCCCTGTTCCCACCATGAGTCTGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648957.1
CDS-3UTR CCA 90 bp CATTGGCCCCACAGACATGAGCTGTGTTGGAGCTTGTGCCCTCGGCACCCCATTGCCACAGGCTACAGATaGTGGAACCAGAATGGGGAG +
Preference number: 4 (lower is better)
Translates to: HWPHRHELCWSLCPRHPIATGYR*WNQNGE
Trigger: CTCCCCATTCTGGTTCCACCATCTGTAGCCTGTGGC...AATGGGGTGCCGAGGGCACAAGCTCCAACACAGCTCATGTCTGTGGGGCCAATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000648957.1
CDS-3UTR TCA 90 bp CTCTGTCTCGTCCACTTGGCATTTGTAGGAGAAGAGGATCTTGGGCTCCGAGCCAGCGATGAGGCACACTaGTGTTTGGTGCCAGGGGTG +
Preference number: 4 (lower is better)
Translates to: LCLVHLAFVGEEDLGLRASDEAH*CLVPGV
Trigger: CACCCCTGGCACCAAACATCAGTGTGCCTCATCGCT...GGCTCGGAGCCCAAGATCCTCTTCTCCTACAAATGCCAAGTGGACGAGACAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393400.6
ENST00000483868.5
CDS-3UTR TCA 90 bp AGGGCTGGGGTAGGTGTACATCTGGCTCCTCTGTCTCGTCCACTTGGCATTTGTAGCGATGAGGCACACTaGTGTTTGGTGCCAGGGGTG +
Preference number: 4 (lower is better)
Translates to: RAGVGVHLAPLSRPLGICSDEAH*CLVPGV
Trigger: CACCCCTGGCACCAAACATCAGTGTGCCTCATCGCT...ACAAATGCCAAGTGGACGAGACAGAGGAGCCAGATGTACACCTACCCCAGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393400.6
ENST00000483868.5
CDS-3UTR TCA 90 bp CTTCAGTCCATCCACCATGGTGGATGCTTTGAGGAGGCCAAAGCACCATGGGGATGGCCAGCACCCGCTTaGTGCTGGACTTACTCTCCA +
Preference number: 4 (lower is better)
Translates to: LQSIHHGGCFEEAKAPWGWPAPA*CWTYSP
Trigger: TGGAGAGTAAGTCCAGCATCAAGCGGGTGCTGGCCA...TCCCCATGGTGCTTTGGCCTCCTCAAAGCATCCACCATGGTGGATGGACTGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000648957.1
CDS-3UTR TCA 90 bp GCCCTCAGGCTCCTGAAAGGAACCAGCCCCAGTATTCCTGCAAAACCTCCACATTGGCCAGCACCCGCTTaGTGCTGGACTTACTCTCCA +
Preference number: 4 (lower is better)
Translates to: ALRLLKGTSPSIPAKPPHWPAPA*CWTYSP
Trigger: TGGAGAGTAAGTCCAGCATCAAGCGGGTGCTGGCCA...ATGTGGAGGTTTTGCAGGAATACTGGGGCTGGTTCCTTTCAGGAGCCTGAGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355552.8
ENST00000648957.1
CDS-3UTR TCA 90 bp CTTCAGTCCATCCACCATGGTGGATGCTTTGAGGAGGCCAAAGCACCATGGGGAAGCAGAGCCCCTCGATaGTGTCGAAGCACAGCAGCA +
Preference number: 4 (lower is better)
Translates to: LQSIHHGGCFEEAKAPWGSRAPR*CRSTAA
Trigger: TGCTGCTGTGCTTCGACATCATCGAGGGGCTCTGCT...TCCCCATGGTGCTTTGGCCTCCTCAAAGCATCCACCATGGTGGATGGACTGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000648957.1
CDS-3UTR TCA 90 bp GGAAGGAAAGCCTGGGCCATGTCACTGAGCAGTATGAGAGCAGGTGGGAAGGGGCCACACCCATCCTTATaGCAAACATCAGTCCCCGAG +
Preference number: 4 (lower is better)
Translates to: GRKAWAMSLSSMRAGGKGPHPSL*QTSVPE
Trigger: CTCGGGGACTGATGTTTGTCATAAGGATGGGTGTGG...CCCCTTCCCACCTGCTCTCATACTGCTCAGTGACATGGCCCAGGCTTTCCTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355552.8
ENST00000648957.1
CDS-3UTR GCA 90 bp AAGAAAATATACACACTTCAGTCCATCCACCATGGTGGATGCTTTGAGGAGGCCCGCCGCCACTGGGTGTaGGCGGATCCAGCACAGGCC +
Preference number: 4 (lower is better)
Translates to: KKIYTLQSIHHGGCFEEARRHWV*ADPAQA
Trigger: GGCCTGTGCTGGATCCGCGCACACCCAGTGGCGGCG...GGCCTCCTCAAAGCATCCACCATGGTGGATGGACTGAAGTGTGTATATTTTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
CDS-3UTR GCA 90 bp CAGGCATTGATGGCCTTCCAGCGCTCGCTGTCTGTGCTGTTGATGCTGCCAGTGTTGCAGCGTTCGAGGTaGTCACCGTCATGGATACCA +
Preference number: 4 (lower is better)
Translates to: QALMAFQRSLSVLLMLPVLQRSR*SPSWIP
Trigger: TGGTATCCATGACGGTGAGCACCTCGAACGCTGCAA...CACTGGCAGCATCAACAGCACAGACAGCGAGCGCTGGAAGGCCATCAATGCCTG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296210.11
ENST00000393400.6
ENST00000483868.5
CDS-3UTR GCA 90 bp TCCAGACTCATGGTGGGAACAGGGCCACACAGGGCTACTGCCCACAGAACGTCCCTTATCAGCAACAGTTaGAGCGTTCGAGGTGCTCAC +
Preference number: 4 (lower is better)
Translates to: SRLMVGTGPHRATAHRTSLISNS*SVRGAH
Trigger: GTGAGCACCTCGAACGCTGCAACTGTTGCTGATAAG...GGACGTTCTGTGGGCAGTAGCCCTGTGTGGCCCTGTTCCCACCATGAGTCTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000483868.5
ENST00000489960.5
ENST00000648957.1
CDS-3UTR GCA 90 bp GCGCTCGCTGTCTGTGCTGTTGATGCTGCCAGTGTGGCAGGGCATGGAAGCGATCTTATCAGCAACAGTTaGAGCGTTCGAGGTGCTCAC +
Preference number: 4 (lower is better)
Translates to: ALAVCAVDAASVAGHGSDLISNS*SVRGAH
Trigger: GTGAGCACCTCGAACGCTGCAACTGTTGCTGATAAG...ATCGCTTCCATGCCCTGCCACACTGGCAGCATCAACAGCACAGACAGCGAGCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296210.11
ENST00000393400.6
ENST00000483868.5
CDS-3UTR GCA 90 bp GGCCCTGGAAGGAAAGCCTGGGCCATGTCACTGAGCAGTATGAGAGCAGGTGGGCTTATCAGCAACAGTTaGAGCGTTCGAGGTGCTCAC +
Preference number: 4 (lower is better)
Translates to: GPGRKAWAMSLSSMRAGGLISNS*SVRGAH
Trigger: GTGAGCACCTCGAACGCTGCAACTGTTGCTGATAAG...CCCACCTGCTCTCATACTGCTCAGTGACATGGCCCAGGCTTTCCTTCCAGGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000483868.5
ENST00000489960.5
ENST00000648957.1
CDS-3UTR GCA 90 bp GACTCATGGTGGGAACAGGGCCACACAGGGCTACTGCCCACAGAACGTCCCTTGCTTATCAGCAACAGTTaGAGCGTTCGAGGTGCTCAC +
Preference number: 4 (lower is better)
Translates to: DSWWEQGHTGLLPTERPLLISNS*SVRGAH
Trigger: GTGAGCACCTCGAACGCTGCAACTGTTGCTGATAAG...CAAGGGACGTTCTGTGGGCAGTAGCCCTGTGTGGCCCTGTTCCCACCATGAGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000483868.5
ENST00000489960.5
ENST00000648957.1
CDS-3UTR GCA 90 bp GCTCACTGGCCGTACTGTTGGCCCTGTCCGCTATCAACCCTCCAGGCCCTCCCAGACAGAGGAATTCAGTaGCACACAGGGAGATTTATC +
Preference number: 4 (lower is better)
Translates to: AHWPYCWPCPLSTLQALPDRGIQ*HTGRFI
Trigger: GATAAATCTCCCTGTGTGGCACTGAATTCCTCTGTC...TGGGAGGGCCTGGAGGGTTGATAGCGGACAGGGCCAACAGTACGGCCAGTGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355552.8
ENST00000648957.1
CDS-3UTR GCA 90 bp TCCATCCACCATGGTGGATGCTTTGAGGAGGCCAAAGCACCATGGGGATGGGATTATGGAGACCCTGGGTaGTTCAGGAGGGGGACAGAG +
Preference number: 4 (lower is better)
Translates to: SIHHGGCFEEAKAPWGWDYGDPG*FRRGTE
Trigger: CTCTGTCCCCCTCCTGAAGCACCCAGGGTCTCCATA...ATCCCATCCCCATGGTGCTTTGGCCTCCTCAAAGCATCCACCATGGTGGATGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355552.8
ENST00000648957.1
CDS-3UTR GCA 90 bp TCCAGCTCACTGGCCGTACTGTTGGCCCTGTCCGCTATCAACCCTCCAGGCCCTATCCACCATCTTGACTaGTCTCTTCAGTGGCCTTTG +
Preference number: 4 (lower is better)
Translates to: SSSLAVLLALSAINPPGPIHHLD*SLQWPL
Trigger: CAAAGGCCACTGAAGAGAGCAGTCAAGATGGTGGAT...AGGGCCTGGAGGGTTGATAGCGGACAGGGCCAACAGTACGGCCAGTGAGCTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648957.1
CDS-3UTR CCA 90 bp CTTCAGTCCATCCACCATGGTGGATGCTTTGAGGAGGCCAAAGCACCATGGGGACCCAGTACCGGACCCTaGAGGTGCCAATGTCTTCGT +
Preference number: 4 (lower is better)
Translates to: LQSIHHGGCFEEAKAPWGPSTGP*RCQCLR
Trigger: ACGAAGACATTGGCACCTCCAGGGTCCGGTACTGGG...TCCCCATGGTGCTTTGGCCTCCTCAAAGCATCCACCATGGTGGATGGACTGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000648957.1
CDS-3UTR CCA 90 bp CTTCAGTCCATCCACCATGGTGGATGCTTTGAGGAGGCCAAAGCACCATGGGGATCACACTCAGCTCGATaGCCAGCAGGAAGAAGCGGG +
Preference number: 4 (lower is better)
Translates to: LQSIHHGGCFEEAKAPWGSHSAR*PAGRSG
Trigger: CCCGCTTCTTCCTGCTGGCCATCGAGCTGAGTGTGA...TCCCCATGGTGCTTTGGCCTCCTCAAAGCATCCACCATGGTGGATGGACTGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000648957.1
CDS-3UTR CCA 90 bp CACTTCAGTCCATCCACCATGGTGGATGCTTTGAGGAGGCCAAAGCACCATGGGTCACACTCAGCTCGATaGCCAGCAGGAAGAAGCGGG +
Preference number: 4 (lower is better)
Translates to: HFSPSTMVDALRRPKHHGSHSAR*PAGRSG
Trigger: CCCGCTTCTTCCTGCTGGCCATCGAGCTGAGTGTGA...CCCATGGTGCTTTGGCCTCCTCAAAGCATCCACCATGGTGGATGGACTGAAGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000648957.1
CDS-3UTR CCA 90 bp CCCTGGAAGGAAAGCCTGGGCCATGTCACTGAGCAGTATGAGAGCAGGTGGGAACAGTGTGGCAGGGCATaGAAGCGATGTCATCCAGGT +
Preference number: 4 (lower is better)
Translates to: PWKESLGHVTEQYESRWEQCGRA*KRCHPG
Trigger: ACCTGGATGACATCGCTTCCATGCCCTGCCACACTG...TTCCCACCTGCTCTCATACTGCTCAGTGACATGGCCCAGGCTTTCCTTCCAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000483868.5
ENST00000489960.5
ENST00000648957.1
CDS-3UTR CCA 90 bp GAAGCCCCGGAGGAAAGCCACGTAGATGAGCGGAGCGAAGAAGCTGAAGTACAGTTGATGCTGCCAGTGTaGCAGGGCATGGAAGCGATG +
Preference number: 4 (lower is better)
Translates to: EAPEESHVDERSEEAEVQLMLPV*QGMEAM
Trigger: CATCGCTTCCATGCCCTGCCACACTGGCAGCATCAA...CTGTACTTCAGCTTCTTCGCTCCGCTCATCTACGTGGCTTTCCTCCGGGGCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393400.6
ENST00000483868.5
CDS-3UTR CCA 90 bp ACACTTCAGTCCATCCACCATGGTGGATGCTTTGAGGAGGCCAAAGCACCATGGCCTCCAGACTCATGGTaGGAACAGGGCCACACAGGG +
Preference number: 4 (lower is better)
Translates to: TLQSIHHGGCFEEAKAPWPPDSW*EQGHTG
Trigger: CCCTGTGTGGCCCTGTTCCCACCATGAGTCTGGAGG...CCATGGTGCTTTGGCCTCCTCAAAGCATCCACCATGGTGGATGGACTGAAGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000648957.1
CDS-3UTR CCA 90 bp ACACTTCAGTCCATCCACCATGGTGGATGCTTTGAGGAGGCCAAAGCACCATGGCAGTATGAGAGCAGGTaGGAAGGGGAGGAGGGTCCC +
Preference number: 4 (lower is better)
Translates to: TLQSIHHGGCFEEAKAPWQYESR*EGEEGP
Trigger: GGGACCCTCCTCCCCTTCCCACCTGCTCTCATACTG...CCATGGTGCTTTGGCCTCCTCAAAGCATCCACCATGGTGGATGGACTGAAGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000648957.1
CDS-3UTR CCA 90 bp CAGTCCATCCACCATGGTGGATGCTTTGAGGAGGCCAAAGCACCATGGGGATGGCCTGGAAGGAAAGCCTaGGCCATGTCACTGAGCAGT +
Preference number: 4 (lower is better)
Translates to: QSIHHGGCFEEAKAPWGWPGRKA*AMSLSS
Trigger: ACTGCTCAGTGACATGGCCCAGGCTTTCCTTCCAGG...CCATCCCCATGGTGCTTTGGCCTCCTCAAAGCATCCACCATGGTGGATGGACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000648957.1
CDS-3UTR CCA 90 bp CCCTGGAAGGAAAGCCTGGGCCATGTCACTGAGCAGTATGAGAGCAGGTGGGAACCTGGAAGGAAAGCCTaGGCCATGTCACTGAGCAGT +
Preference number: 4 (lower is better)
Translates to: PWKESLGHVTEQYESRWEPGRKA*AMSLSS
Trigger: ACTGCTCAGTGACATGGCCCAGGCTTTCCTTCCAGG...TTCCCACCTGCTCTCATACTGCTCAGTGACATGGCCCAGGCTTTCCTTCCAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000483868.5
ENST00000489960.5
ENST00000648957.1
CDS-3UTR CCA 90 bp GAAGCCCCGGAGGAAAGCCACGTAGATGAGCGGAGCGAAGAAGCTGAAGTACAGCCTGGAAGGAAAGCCTaGGCCATGTCACTGAGCAGT +
Preference number: 4 (lower is better)
Translates to: EAPEESHVDERSEEAEVQPGRKA*AMSLSS
Trigger: ACTGCTCAGTGACATGGCCCAGGCTTTCCTTCCAGG...CTGTACTTCAGCTTCTTCGCTCCGCTCATCTACGTGGCTTTCCTCCGGGGCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393400.6
ENST00000483868.5
CDS-3UTR CCA 90 bp CAGTCCATCCACCATGGTGGATGCTTTGAGGAGGCCAAAGCACCATGGGGATGGCAACCTTGCCAAGCATaGCCCTGGAAGGAAAGCCTG +
Preference number: 4 (lower is better)
Translates to: QSIHHGGCFEEAKAPWGWQPCQA*PWKESL
Trigger: CAGGCTTTCCTTCCAGGGCCATGCTTGGCAAGGTTG...CCATCCCCATGGTGCTTTGGCCTCCTCAAAGCATCCACCATGGTGGATGGACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000648957.1
CDS-3UTR CCA 90 bp CCTTACCCCGCTCACTCAGAATGCCGTGAGCTTGCCTTCCCTGATTACCAGGCTCAACCTTGCCAAGCATaGCCCTGGAAGGAAAGCCTG +
Preference number: 4 (lower is better)
Translates to: PYPAHSECRELAFPDYQAQPCQA*PWKESL
Trigger: CAGGCTTTCCTTCCAGGGCCATGCTTGGCAAGGTTG...AGCCTGGTAATCAGGGAAGGCAAGCTCACGGCATTCTGAGTGAGCGGGGTAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355552.8
ENST00000648957.1
CDS-3UTR CCA 90 bp CTGGATGGGCTCCTCCTCTCCAACTCTGGGGATTACATAACTGGCAGCAACTCCACCATGGGGATGGGATaGAGGCATTGGGAGAGCCAG +
Preference number: 4 (lower is better)
Translates to: LDGLLLSNSGDYITGSNSTMGMG*RHWESQ
Trigger: CTGGCTCTCCCAATGCCTCCATCCCATCCCCATGGT...GGAGTTGCTGCCAGTTATGTAATCCCCAGAGTTGGAGAGGAGGAGCCCATCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355552.8
ENST00000648957.1
CDS-3UTR CCA 90 bp AGCTGCCCTCAGGCATTGATGGCCTTCCAGCGCTCGCTGTCTGTGCTGTTGATGAAAGCACCATGGGGATaGGATGGAGGCATTGGGAGA +
Preference number: 4 (lower is better)
Translates to: SCPQALMAFQRSLSVLLMKAPWG*DGGIGR
Trigger: TCTCCCAATGCCTCCATCCCATCCCCATGGTGCTTT...CATCAACAGCACAGACAGCGAGCGCTGGAAGGCCATCAATGCCTGAGGGCAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296210.11
ENST00000393400.6
ENST00000483868.5
CDS-3UTR CCA 90 bp TCCATCCACCATGGTGGATGCTTTGAGGAGGCCAAAGCACCATGGGGATGGGATAGGGGCAGCGGCAGCTaGGATCCTGTTTCTCTTCAC +
Preference number: 4 (lower is better)
Translates to: SIHHGGCFEEAKAPWGWDRGSGS*DPVSLH
Trigger: GTGAAGAGAAACAGGATCCCAGCTGCCGCTGCCCCT...ATCCCATCCCCATGGTGCTTTGGCCTCCTCAAAGCATCCACCATGGTGGATGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355552.8
ENST00000648957.1
CDS-3UTR CCA 90 bp CTGGATGGGCTCCTCCTCTCCAACTCTGGGGATTACATAACTGGCAGCAACTCCCAGTTGGCTGTGTCCTaGATGGGCTCCTCCTCTCCA +
Preference number: 4 (lower is better)
Translates to: LDGLLLSNSGDYITGSNSQLAVS*MGSSSP
Trigger: TGGAGAGGAGGAGCCCATCCAGGACACAGCCAACTG...GGAGTTGCTGCCAGTTATGTAATCCCCAGAGTTGGAGAGGAGGAGCCCATCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355552.8
ENST00000648957.1
CDS-3UTR CCA 90 bp CTCCAGACTCATGGTGGGAACAGGGCCACACAGGGCTACTGCCCACAGAACGTCCAAGGTGATGTGTCCTaGAGCAAGTCCAGCATGACT +
Preference number: 4 (lower is better)
Translates to: LQTHGGNRATQGYCPQNVQGDVS*SKSSMT
Trigger: AGTCATGCTGGACTTGCTCCAGGACACATCACCTTG...GACGTTCTGTGGGCAGTAGCCCTGTGTGGCCCTGTTCCCACCATGAGTCTGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648957.1
CDS-3UTR TCA 90 bp AACTCCCTTTCACTCTGGCTGCCAAAAAGCTCAAAGCCGAACTCAGGTACAAGGACCGGCTCCGTGGAATaGGGGCTAGGCAGGAAAGGC +
Preference number: 4 (lower is better)
Translates to: NSLSLWLPKSSKPNSGTRTGSVE*GLGRKG
Trigger: GCCTTTCCTGCCTAGCCCTCATTCCACGGAGCCGGT...CCTTGTACCTGAGTTCGGCTTTGAGCTTTTTGGCAGCCAGAGTGAAAGGGAGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355552.8
CDS-3UTR TCA 90 bp AGTCCATCCACCATGGTGGATGCTTTGAGGAGGCCAAAGCACCATGGGGATGGGTCCAGAGCAGGAAGATaGGGAAGAGCACATTGGGGA +
Preference number: 4 (lower is better)
Translates to: SPSTMVDALRRPKHHGDGSRAGR*GRAHWG
Trigger: TCCCCAATGTGCTCTTCCTCATCTTCCTGCTCTGGA...CCCATCCCCATGGTGCTTTGGCCTCCTCAAAGCATCCACCATGGTGGATGGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000648957.1
CDS-3UTR TCA 90 bp ACACTTCAGTCCATCCACCATGGTGGATGCTTTGAGGAGGCCAAAGCACCATGGTGGCCAGCACCCGCTTaGTGCTGGACTTACTCTCCA +
Preference number: 4 (lower is better)
Translates to: TLQSIHHGGCFEEAKAPWWPAPA*CWTYSP
Trigger: TGGAGAGTAAGTCCAGCATCAAGCGGGTGCTGGCCA...CCATGGTGCTTTGGCCTCCTCAAAGCATCCACCATGGTGGATGGACTGAAGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000648957.1
CDS-3UTR TCA 90 bp AGGGCTGGGGTAGGTGTACATCTGGCTCCTCTGTCTCGTCCACTTGGCATTTGTGCGGAGCGAAGAAGCTaGAGTACAGGAAGGTTGTGG +
Preference number: 4 (lower is better)
Translates to: RAGVGVHLAPLSRPLGICAERRS*STGRLW
Trigger: CCACAACCTTCCTGTACTTCAGCTTCTTCGCTCCGC...ACAAATGCCAAGTGGACGAGACAGAGGAGCCAGATGTACACCTACCCCAGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393400.6
ENST00000483868.5
CDS-3UTR TCA 90 bp CACTGCAGCCAGCAAACTTCGGCTGACACTGTGCCATCTTGGACTGCATGTGGAGCGGAGCGAAGAAGCTaGAGTACAGGAAGGTTGTGG +
Preference number: 4 (lower is better)
Translates to: HCSQQTSADTVPSWTACGAERRS*STGRLW
Trigger: CCACAACCTTCCTGTACTTCAGCTTCTTCGCTCCGC...TCCACATGCAGTCCAAGATGGCACAGTGTCAGCCGAAGTTTGCTGGCTGCAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355552.8
ENST00000648957.1
CDS-3UTR TCA 90 bp CCTTACCCCGCTCACTCAGAATGCCGTGAGCTTGCCTTCCCTGATTACCAGGCTCCACACCCATCCTTATaGCAAACATCAGTCCCCGAG +
Preference number: 4 (lower is better)
Translates to: PYPAHSECRELAFPDYQAPHPSL*QTSVPE
Trigger: CTCGGGGACTGATGTTTGTCATAAGGATGGGTGTGG...AGCCTGGTAATCAGGGAAGGCAAGCTCACGGCATTCTGAGTGAGCGGGGTAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355552.8
ENST00000648957.1
CDS-3UTR TCA 90 bp CTTCAGTCCATCCACCATGGTGGATGCTTTGAGGAGGCCAAAGCACCATGGGGATTGGCCCCACAGACATaGGCTGTGTTGGAGCTTGTG +
Preference number: 4 (lower is better)
Translates to: LQSIHHGGCFEEAKAPWGLAPQT*AVLELV
Trigger: CACAAGCTCCAACACAGCTCATGTCTGTGGGGCCAA...TCCCCATGGTGCTTTGGCCTCCTCAAAGCATCCACCATGGTGGATGGACTGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355552.8
ENST00000648957.1
CDS-3UTR TCA 90 bp TCCAGACTCATGGTGGGAACAGGGCCACACAGGGCTACTGCCCACAGAACGTCCGGCTTTTACATGAGCTaGGAGGCCCCGATAAAGTAT +
Preference number: 4 (lower is better)
Translates to: SRLMVGTGPHRATAHRTSGFYMS*EAPIKY
Trigger: ATACTTTATCGGGGCCTCTCAGCTCATGTAAAAGCC...GGACGTTCTGTGGGCAGTAGCCCTGTGTGGCCCTGTTCCCACCATGAGTCTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355552.8
ENST00000648957.1
CDS-3UTR TCA 90 bp CCCTGGAAGGAAAGCCTGGGCCATGTCACTGAGCAGTATGAGAGCAGGTGGGAAGACTGCATGTGGATCTaGTGGTCAAATCCCTGCTGG +
Preference number: 4 (lower is better)
Translates to: PWKESLGHVTEQYESRWEDCMWI*WSNPCW
Trigger: CCAGCAGGGATTTGACCATCAGATCCACATGCAGTC...TTCCCACCTGCTCTCATACTGCTCAGTGACATGGCCCAGGCTTTCCTTCCAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355552.8
ENST00000648957.1
CDS-3UTR TCA 90 bp TCCATCCACCATGGTGGATGCTTTGAGGAGGCCAAAGCACCATGGGGATGGGATCCAGCAAACTTCGGCTaGCACTGTGCCATCTTGGAC +
Preference number: 4 (lower is better)
Translates to: SIHHGGCFEEAKAPWGWDPANFG*HCAILD
Trigger: GTCCAAGATGGCACAGTGTCAGCCGAAGTTTGCTGG...ATCCCATCCCCATGGTGCTTTGGCCTCCTCAAAGCATCCACCATGGTGGATGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355552.8
ENST00000648957.1
CDS-3UTR TCA 90 bp CAGGGACAAGTGGGCCCCTCTCCCCTACTCATGCCTTATGATCCCAGTGCTTTGACACATCCGTTGGTGTaGACACAGGATGGCTCTGGA +
Preference number: 4 (lower is better)
Translates to: QGQVGPSPLLMPYDPSALTHPLV*TQDGSG
Trigger: TCCAGAGCCATCCTGTGTTCACACCAACGGATGTGT...CAAAGCACTGGGATCATAAGGCATGAGTAGGGGAGAGGGGCCCACTTGTCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355552.8
ENST00000648957.1
CDS-3UTR TCA 90 bp CCAACCCTTACCCCGCTCACTCAGAATGCCGTGAGCTTGCCTTCCCTGATTACCCTTCAATGTAGTGTCTaGCTCCAGACACACCGGCCA +
Preference number: 4 (lower is better)
Translates to: PTLTPLTQNAVSLPSLITLQCSV*LQTHRP
Trigger: TGGCCGGTGTGTCTGGAGTCAGACACTACATTGAAG...GGTAATCAGGGAAGGCAAGCTCACGGCATTCTGAGTGAGCGGGGTAAGGGTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648957.1
CDS-3UTR GCA 90 bp CTCTGTCTCGTCCACTTGGCATTTGTAGGAGAAGAGGATCTTGGGCTCCGAGCCACCGGACCCTGGAGGTaGCAATGTCTTCGTAGAGCA +
Preference number: 4 (lower is better)
Translates to: LCLVHLAFVGEEDLGLRATGPWR*QCLRRA
Trigger: TGCTCTACGAAGACATTGGCACCTCCAGGGTCCGGT...GGCTCGGAGCCCAAGATCCTCTTCTCCTACAAATGCCAAGTGGACGAGACAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393400.6
ENST00000483868.5
CDS-3UTR GCA 90 bp ACACTTCAGTCCATCCACCATGGTGGATGCTTTGAGGAGGCCAAAGCACCATGGTTGGGCACTGGGGACTaGTCCTTGGTTGAGCAGAGG +
Preference number: 4 (lower is better)
Translates to: TLQSIHHGGCFEEAKAPWLGTGD*SLVEQR
Trigger: CCTCTGCTCAACCAAGGAGCAGTCCCCAGTGCCCAA...CCATGGTGCTTTGGCCTCCTCAAAGCATCCACCATGGTGGATGGACTGAAGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355552.8
ENST00000648957.1
CDS-3UTR GCA 90 bp CTGGATGGGCTCCTCCTCTCCAACTCTGGGGATTACATAACTGGCAGCAACTCCCCTTACAAAAGGCCCTaGAGGATGGGTCTTCTCCGC +
Preference number: 4 (lower is better)
Translates to: LDGLLLSNSGDYITGSNSPYKRP*RMGLLR
Trigger: GCGGAGAAGACCCATCCTGCAGGGCCTTTTGTAAGG...GGAGTTGCTGCCAGTTATGTAATCCCCAGAGTTGGAGAGGAGGAGCCCATCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355552.8
ENST00000648957.1
CDS-3UTR GCA 90 bp GCCCTCAGGCTCCTGAAAGGAACCAGCCCCAGTATTCCTGCAAAACCTCCACATCCAGGCTCTGAAGCATaGAGTTGGCTGTGTCCTGGA +
Preference number: 4 (lower is better)
Translates to: ALRLLKGTSPSIPAKPPHPGSEA*SWLCPG
Trigger: TCCAGGACACAGCCAACTGCATGCTTCAGAGCCTGG...ATGTGGAGGTTTTGCAGGAATACTGGGGCTGGTTCCTTTCAGGAGCCTGAGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355552.8
ENST00000648957.1
CDS-3UTR GCA 90 bp CCTTACCCCGCTCACTCAGAATGCCGTGAGCTTGCCTTCCCTGATTACCAGGCTCTTCGGCTGACACTGTaGCATCTTGGACTGCATGTG +
Preference number: 4 (lower is better)
Translates to: PYPAHSECRELAFPDYQALRLTL*HLGLHV
Trigger: CACATGCAGTCCAAGATGGCACAGTGTCAGCCGAAG...AGCCTGGTAATCAGGGAAGGCAAGCTCACGGCATTCTGAGTGAGCGGGGTAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355552.8
ENST00000648957.1
CDS-3UTR GCA 90 bp GGGAGAGCCAGCCCTGCCCTCGTGCCAAGGGTGCAGAGAAGGAGGGTGCCCTCAAGGAAGGCTAGAAAATaGAGTCTTTATTCTAGACAG +
Preference number: 4 (lower is better)
Translates to: GRASPALVPRVQRRRVPSRKARK*SLYSRQ
Trigger: CTGTCTAGAATAAAGACTGCATTTTCTAGCCTTCCT...TGAGGGCACCCTCCTTCTCTGCACCCTTGGCACGAGGGCAGGGCTGGCTCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355552.8
CDS-3UTR GCA 90 bp GATTGGGAGCCCCAGGGAGGTGGGGCCTCCAGACTCATGGTGGGAACAGGGCCACAGAGTGAGCAAAGCTaGAGTCTTTTTGTAACTGAA +
Preference number: 4 (lower is better)
Translates to: DWEPQGGGASRLMVGTGPQSEQS*SLFVTE
Trigger: TTCAGTTACAAAAAGACTGCAGCTTTGCTCACTCTG...TGGCCCTGTTCCCACCATGAGTCTGGAGGCCCCACCTCCCTGGGGCTCCCAATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000648957.1
CDS-3UTR GCA 90 bp ATCCACCATGGTGGATGCTTTGAGGAGGCCAAAGCACCATGGGGATGGGATGGAAAGCCTGTCCCAGGCTaGCTGAGTGTCCTCAAGACA +
Preference number: 4 (lower is better)
Translates to: IHHGGCFEEAKAPWGWDGKPVPG*LSVLKT
Trigger: TGTCTTGAGGACACTCAGGCAGCCTGGGACAGGCTT...TCCATCCCATCCCCATGGTGCTTTGGCCTCCTCAAAGCATCCACCATGGTGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648957.1
CDS-3UTR CCA 90 bp AACTCCCTTTCACTCTGGCTGCCAAAAAGCTCAAAGCCGAACTCAGGTACAAGGGATGGCAAAGGGGATTaGGAGCCCCAGGGAGGTGGG +
Preference number: 4 (lower is better)
Translates to: NSLSLWLPKSSKPNSGTRDGKGD*EPQGGG
Trigger: CCCACCTCCCTGGGGCTCCCAATCCCCTTTGCCATC...CCTTGTACCTGAGTTCGGCTTTGAGCTTTTTGGCAGCCAGAGTGAAAGGGAGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000355552.8
ENST00000648957.1
CDS-3UTR CCA 90 bp CTTCAGTCCATCCACCATGGTGGATGCTTTGAGGAGGCCAAAGCACCATGGGGACCTGGAAGGAAAGCCTaGGCCATGTCACTGAGCAGT +
Preference number: 4 (lower is better)
Translates to: LQSIHHGGCFEEAKAPWGPGRKA*AMSLSS
Trigger: ACTGCTCAGTGACATGGCCCAGGCTTTCCTTCCAGG...TCCCCATGGTGCTTTGGCCTCCTCAAAGCATCCACCATGGTGGATGGACTGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000648957.1
CDS-3UTR CCA 90 bp CACTTCAGTCCATCCACCATGGTGGATGCTTTGAGGAGGCCAAAGCACCATGGGCAACCTTGCCAAGCATaGCCCTGGAAGGAAAGCCTG +
Preference number: 4 (lower is better)
Translates to: HFSPSTMVDALRRPKHHGQPCQA*PWKESL
Trigger: CAGGCTTTCCTTCCAGGGCCATGCTTGGCAAGGTTG...CCCATGGTGCTTTGGCCTCCTCAAAGCATCCACCATGGTGGATGGACTGAAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000648957.1
CDS-3UTR TCA 90 bp GCCGAAGAAGCCCCGGAGGAAAGCCACGTAGATGAGCGGAGCGAAGAAGCTGAAATTAAAGTCCTCAGCTaGGAGATGGGCATCAGGGTA +
Preference number: 4 (lower is better)
Translates to: AEEAPEESHVDERSEEAEIKVLS*EMGIRV
Trigger: TACCCTGATGCCCATCTCTCAGCTGAGGACTTTAAT...TTCAGCTTCTTCGCTCCGCTCATCTACGTGGCTTTCCTCCGGGGCTTCTTCGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393400.6
ENST00000483868.5
CDS-3UTR TCA 90 bp CAGGCATTGATGGCCTTCCAGCGCTCGCTGTCTGTGCTGTTGATGCTGCCAGTGATTAAAGTCCTCAGCTaGGAGATGGGCATCAGGGTA +
Preference number: 4 (lower is better)
Translates to: QALMAFQRSLSVLLMLPVIKVLS*EMGIRV
Trigger: TACCCTGATGCCCATCTCTCAGCTGAGGACTTTAAT...CACTGGCAGCATCAACAGCACAGACAGCGAGCGCTGGAAGGCCATCAATGCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296210.11
ENST00000393400.6
ENST00000483868.5
CDS-3UTR TCA 90 bp CTTCAGTCCATCCACCATGGTGGATGCTTTGAGGAGGCCAAAGCACCATGGGGAGACTGCATGTGGATCTaGTGGTCAAATCCCTGCTGG +
Preference number: 4 (lower is better)
Translates to: LQSIHHGGCFEEAKAPWGDCMWI*WSNPCW
Trigger: CCAGCAGGGATTTGACCATCAGATCCACATGCAGTC...TCCCCATGGTGCTTTGGCCTCCTCAAAGCATCCACCATGGTGGATGGACTGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355552.8
ENST00000648957.1
CDS-3UTR TCA 90 bp TGGCCCCACAGACATGAGCTGTGTTGGAGCTTGTGCCCTCGGCACCCCATTCCCTCTCTTTTCTTCTGTTaGTGCCTCTCTGCTCATTCA +
Preference number: 4 (lower is better)
Translates to: WPHRHELCWSLCPRHPIPSLFFC*CLSAHS
Trigger: TGAATGAGCAGAGAGGCATCAACAGAAGAAAAGAGA...GGGAATGGGGTGCCGAGGGCACAAGCTCCAACACAGCTCATGTCTGTGGGGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355552.8
ENST00000648957.1
CDS-3UTR GCA 90 bp ACACTTCAGTCCATCCACCATGGTGGATGCTTTGAGGAGGCCAAAGCACCATGGACCGGACCCTGGAGGTaGCAATGTCTTCGTAGAGCA +
Preference number: 4 (lower is better)
Translates to: TLQSIHHGGCFEEAKAPWTGPWR*QCLRRA
Trigger: TGCTCTACGAAGACATTGGCACCTCCAGGGTCCGGT...CCATGGTGCTTTGGCCTCCTCAAAGCATCCACCATGGTGGATGGACTGAAGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000648957.1
CDS-3UTR GCA 90 bp TCCATCCACCATGGTGGATGCTTTGAGGAGGCCAAAGCACCATGGGGATGGGATTTGCAGCGTTCGAGGTaGTCACCGTCATGGATACCA +
Preference number: 4 (lower is better)
Translates to: SIHHGGCFEEAKAPWGWDLQRSR*SPSWIP
Trigger: TGGTATCCATGACGGTGAGCACCTCGAACGCTGCAA...ATCCCATCCCCATGGTGCTTTGGCCTCCTCAAAGCATCCACCATGGTGGATGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000648957.1
CDS-3UTR GCA 90 bp AGTCCATCCACCATGGTGGATGCTTTGAGGAGGCCAAAGCACCATGGGGATGGGATCCACCATGGTGGATaGTTTGAGGAGGCCAAAGCA +
Preference number: 4 (lower is better)
Translates to: SPSTMVDALRRPKHHGDGIHHGG*FEEAKA
Trigger: TGCTTTGGCCTCCTCAAAGCATCCACCATGGTGGAT...CCCATCCCCATGGTGCTTTGGCCTCCTCAAAGCATCCACCATGGTGGATGGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000648957.1
CDS-3UTR GCA 90 bp CAGTCCATCCACCATGGTGGATGCTTTGAGGAGGCCAAAGCACCATGGGGATGGCCTCTCCCCTACTCATaGCTTATGATCCCAGTGCTT +
Preference number: 4 (lower is better)
Translates to: QSIHHGGCFEEAKAPWGWPLPYS*LMIPVL
Trigger: AAGCACTGGGATCATAAGGCATGAGTAGGGGAGAGG...CCATCCCCATGGTGCTTTGGCCTCCTCAAAGCATCCACCATGGTGGATGGACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355552.8
ENST00000648957.1
CDS-3UTR GCA 90 bp CCCTGGAAGGAAAGCCTGGGCCATGTCACTGAGCAGTATGAGAGCAGGTGGGAACCCTTTCACTCTGGCTaGCAAAAAGCTCAAAGCCGA +
Preference number: 4 (lower is better)
Translates to: PWKESLGHVTEQYESRWEPFHSG*QKAQSR
Trigger: TCGGCTTTGAGCTTTTTGGCAGCCAGAGTGAAAGGG...TTCCCACCTGCTCTCATACTGCTCAGTGACATGGCCCAGGCTTTCCTTCCAGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355552.8
ENST00000648957.1
CDS-3UTR CCA 90 bp CAGGCATTGATGGCCTTCCAGCGCTCGCTGTCTGTGCTGTTGATGCTGCCAGTGAGTACAGGAAGGTTGTaGCATCTACACAGCAGGAAG +
Preference number: 4 (lower is better)
Translates to: QALMAFQRSLSVLLMLPVSTGRL*HLHSRK
Trigger: CTTCCTGCTGTGTAGATGCCACAACCTTCCTGTACT...CACTGGCAGCATCAACAGCACAGACAGCGAGCGCTGGAAGGCCATCAATGCCTG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296210.11
CDS-3UTR CCA 90 bp AAATATACACACTTCAGTCCATCCACCATGGTGGATGCTTTGAGGAGGCCAAAGGGAGCCCCAGGGAGGTaGGGCCTCCAGACTCATGGT +
Preference number: 4 (lower is better)
Translates to: KYTHFSPSTMVDALRRPKGAPGR*GLQTHG
Trigger: ACCATGAGTCTGGAGGCCCCACCTCCCTGGGGCTCC...CTTTGGCCTCCTCAAAGCATCCACCATGGTGGATGGACTGAAGTGTGTATATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000648957.1
CDS-3UTR CCA 90 bp CACTGCAGCCAGCAAACTTCGGCTGACACTGTGCCATCTTGGACTGCATGTGGAAAAGCACCATGGGGATaGGATGGAGGCATTGGGAGA +
Preference number: 4 (lower is better)
Translates to: HCSQQTSADTVPSWTACGKAPWG*DGGIGR
Trigger: TCTCCCAATGCCTCCATCCCATCCCCATGGTGCTTT...TCCACATGCAGTCCAAGATGGCACAGTGTCAGCCGAAGTTTGCTGGCTGCAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355552.8
ENST00000648957.1
CDS-3UTR CCA 90 bp GCCCTCAGGCTCCTGAAAGGAACCAGCCCCAGTATTCCTGCAAAACCTCCACATAAAGCACCATGGGGATaGGATGGAGGCATTGGGAGA +
Preference number: 4 (lower is better)
Translates to: ALRLLKGTSPSIPAKPPHKAPWG*DGGIGR
Trigger: TCTCCCAATGCCTCCATCCCATCCCCATGGTGCTTT...ATGTGGAGGTTTTGCAGGAATACTGGGGCTGGTTCCTTTCAGGAGCCTGAGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355552.8
ENST00000648957.1
CDS-3UTR CCA 90 bp GAAGCATGCAGTTGGCTGTGTCCTGGATGGGCTCCTCCTCTCCAACTCTGGGGACAAAGGGAGAGGGGCTaGCTCACAAAACATAGTTCT +
Preference number: 4 (lower is better)
Translates to: EACSWLCPGWAPPLQLWGQRERG*LTKHSS
Trigger: AGAACTATGTTTTGTGAGCCAGCCCCTCTCCCTTTG...TCCCCAGAGTTGGAGAGGAGGAGCCCATCCAGGACACAGCCAACTGCATGCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355552.8
ENST00000648957.1
CDS-3UTR CCA 90 bp GCCCTCAGGCTCCTGAAAGGAACCAGCCCCAGTATTCCTGCAAAACCTCCACATTCTGAAGCATGCAGTTaGCTGTGTCCTGGATGGGCT +
Preference number: 4 (lower is better)
Translates to: ALRLLKGTSPSIPAKPPHSEACS*LCPGWA
Trigger: AGCCCATCCAGGACACAGCCAACTGCATGCTTCAGA...ATGTGGAGGTTTTGCAGGAATACTGGGGCTGGTTCCTTTCAGGAGCCTGAGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355552.8
ENST00000648957.1
CDS-3UTR CCA 90 bp CAGCAAACTTCGGCTGACACTGTGCCATCTTGGACTGCATGTGGATCTGATGGTAGGTTATGGAGACCCTaGGTGCTTCAGGAGGGGGAC +
Preference number: 4 (lower is better)
Translates to: QQTSADTVPSWTACGSDGRLWRP*VLQEGD
Trigger: GTCCCCCTCCTGAAGCACCCAGGGTCTCCATAACCT...ACCATCAGATCCACATGCAGTCCAAGATGGCACAGTGTCAGCCGAAGTTTGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355552.8
ENST00000648957.1
CDS-3UTR CCA 90 bp TGCCCTCAGGCATTGATGGCCTTCCAGCGCTCGCTGTCTGTGCTGTTGATGCTGAGTACAGGAAGGTTGTaGCATCTACACAGAAGGCAG +
Preference number: 4 (lower is better)
Translates to: CPQALMAFQRSLSVLLMLSTGRL*HLHRRQ
Trigger: CTGCCTTCTGTGTAGATGCCACAACCTTCCTGTACT...CAGCATCAACAGCACAGACAGCGAGCGCTGGAAGGCCATCAATGCCTGAGGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483868.5
CDS-3UTR TCA 90 bp CCCTGGAAGGAAAGCCTGGGCCATGTCACTGAGCAGTATGAGAGCAGGTGGGAAATTAAAGTCCTCAGCTaGGAGATGGGCATCAGGGTA +
Preference number: 4 (lower is better)
Translates to: PWKESLGHVTEQYESRWEIKVLS*EMGIRV
Trigger: TACCCTGATGCCCATCTCTCAGCTGAGGACTTTAAT...TTCCCACCTGCTCTCATACTGCTCAGTGACATGGCCCAGGCTTTCCTTCCAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000483868.5
ENST00000489960.5
ENST00000648957.1
CDS-3UTR TCA 90 bp AGCCTGGGCCATGTCACTGAGCAGTATGAGAGCAGGTGGGAAGGGGAGGAGGGTTCTCTTTTCTTCTGTTaGTGCCTCTCTGCTCATTCA +
Preference number: 4 (lower is better)
Translates to: SLGHVTEQYESRWEGEEGSLFFC*CLSAHS
Trigger: TGAATGAGCAGAGAGGCATCAACAGAAGAAAAGAGA...ACCCTCCTCCCCTTCCCACCTGCTCTCATACTGCTCAGTGACATGGCCCAGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355552.8
ENST00000648957.1
CDS-3UTR GCA 90 bp TGTGAACACAGGATGGCTCTGGAAGGTTATGGAGACCCTGGGTGCTTCAGGAGGCTTATCAGCAACAGTTaGAGCGTTCGAGGTGCTCAC +
Preference number: 4 (lower is better)
Translates to: CEHRMALEGYGDPGCFRRLISNS*SVRGAH
Trigger: GTGAGCACCTCGAACGCTGCAACTGTTGCTGATAAG...CCTCCTGAAGCACCCAGGGTCTCCATAACCTTCCAGAGCCATCCTGTGTTCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355552.8
ENST00000648957.1
CDS-3UTR GCA 90 bp AAATATACACACTTCAGTCCATCCACCATGGTGGATGCTTTGAGGAGGCCAAAGCCCTCGTGCCAAGGGTaGAGAGAAGGAGGGTGCCCT +
Preference number: 4 (lower is better)
Translates to: KYTHFSPSTMVDALRRPKPSCQG*REGGCP
Trigger: AGGGCACCCTCCTTCTCTGCACCCTTGGCACGAGGG...CTTTGGCCTCCTCAAAGCATCCACCATGGTGGATGGACTGAAGTGTGTATATTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000648957.1
CDS-3UTR GCA 90 bp GCCCTCAGGCTCCTGAAAGGAACCAGCCCCAGTATTCCTGCAAAACCTCCACATTGGGGGCCTACTATGTaGCAAGCACTATTCTTGAGG +
Preference number: 4 (lower is better)
Translates to: ALRLLKGTSPSIPAKPPHWGPTM*QALFLR
Trigger: CCTCAAGAATAGTGCTTGGCACATAGTAGGCCCCCA...ATGTGGAGGTTTTGCAGGAATACTGGGGCTGGTTCCTTTCAGGAGCCTGAGGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000355552.8
ENST00000648957.1
CDS-3UTR GCA 90 bp CACTTCAGTCCATCCACCATGGTGGATGCTTTGAGGAGGCCAAAGCACCATGGGCCTCTCCCCTACTCATaGCTTATGATCCCAGTGCTT +
Preference number: 4 (lower is better)
Translates to: HFSPSTMVDALRRPKHHGPLPYS*LMIPVL
Trigger: AAGCACTGGGATCATAAGGCATGAGTAGGGGAGAGG...CCCATGGTGCTTTGGCCTCCTCAAAGCATCCACCATGGTGGATGGACTGAAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355552.8
ENST00000648957.1
CDS-3UTR GCA 90 bp CTGGATGGGCTCCTCCTCTCCAACTCTGGGGATTACATAACTGGCAGCAACTCCTCTCTGCTCATTCACTaGAGCCAGCAAACTTCGGCT +
Preference number: 4 (lower is better)
Translates to: LDGLLLSNSGDYITGSNSSLLIH*SQQTSA
Trigger: AGCCGAAGTTTGCTGGCTGCAGTGAATGAGCAGAGA...GGAGTTGCTGCCAGTTATGTAATCCCCAGAGTTGGAGAGGAGGAGCCCATCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355552.8
ENST00000648957.1
CDS-3UTR GCA 90 bp GTGGGAACAGGGCCACACAGGGCTACTGCCCACAGAACGTCCCTTGACCTGGTCCTAATTAAGACTGTGTaGTCCAGCAATTCTACTTGC +
Preference number: 4 (lower is better)
Translates to: VGTGPHRATAHRTSLDLVLIKTV*SSNSTC
Trigger: GCAAGTAGAATTGCTGGAGCACACAGTCTTAATTAG...GACCAGGTCAAGGGACGTTCTGTGGGCAGTAGCCCTGTGTGGCCCTGTTCCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355552.8
ENST00000648957.1
CDS-3UTR CCA 90 bp ATCAAGAAAATATACACACTTCAGTCCATCCACCATGGTGGATGCTTTGAGGAGCCCATCCGCCGCCACTaGGTGTGCGCGGATCCAGCA +
Preference number: 4 (lower is better)
Translates to: IKKIYTLQSIHHGGCFEEPIRRH*VCADPA
Trigger: TGCTGGATCCGCGCACACCCAGTGGCGGCGGATGGG...CTCCTCAAAGCATCCACCATGGTGGATGGACTGAAGTGTGTATATTTTCTTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
CDS-3UTR CCA 90 bp GGTGTACATCTGGCTCCTCTGTCTCGTCCACTTGGCATTTGTAGGAGAAGAGGAAGGAGAAGAGGATCTTaGGCTCCGAGCCGAAGAAGC +
Preference number: 4 (lower is better)
Translates to: GVHLAPLSRPLGICRRRGRRRGS*APSRRS
Trigger: GCTTCTTCGGCTCGGAGCCCAAGATCCTCTTCTCCT...TCCTCTTCTCCTACAAATGCCAAGTGGACGAGACAGAGGAGCCAGATGTACACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393400.6
ENST00000483868.5
CDS-3UTR CCA 90 bp TGTGAACACAGGATGGCTCTGGAAGGTTATGGAGACCCTGGGTGCTTCAGGAGGAACACAGGATGGCTCTaGAAGGTTATGGAGACCCTG +
Preference number: 4 (lower is better)
Translates to: CEHRMALEGYGDPGCFRRNTGWL*KVMETL
Trigger: CAGGGTCTCCATAACCTTCCAGAGCCATCCTGTGTT...CCTCCTGAAGCACCCAGGGTCTCCATAACCTTCCAGAGCCATCCTGTGTTCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355552.8
ENST00000648957.1
CDS-3UTR CCA 90 bp CCCTGGAAGGAAAGCCTGGGCCATGTCACTGAGCAGTATGAGAGCAGGTGGGAAAGTGTCCTCAAGACATaGATGCTGCCTTCTCTCAGA +
Preference number: 4 (lower is better)
Translates to: PWKESLGHVTEQYESRWESVLKT*MLPSLR
Trigger: TCTGAGAGAAGGCAGCATCCATGTCTTGAGGACACT...TTCCCACCTGCTCTCATACTGCTCAGTGACATGGCCCAGGCTTTCCTTCCAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648957.1
CDS-3UTR TCA 90 bp AACTCCCTTTCACTCTGGCTGCCAAAAAGCTCAAAGCCGAACTCAGGTACAAGGAGCAGCAGGCAGCGATaGGGCACACTGATGTTTGGT +
Preference number: 4 (lower is better)
Translates to: NSLSLWLPKSSKPNSGTRSSRQR*GTLMFG
Trigger: ACCAAACATCAGTGTGCCTCATCGCTGCCTGCTGCT...CCTTGTACCTGAGTTCGGCTTTGAGCTTTTTGGCAGCCAGAGTGAAAGGGAGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355552.8
ENST00000648957.1
CDS-3UTR TCA 90 bp AAGAAAATATACACACTTCAGTCCATCCACCATGGTGGATGCTTTGAGGAGGCCAGGCCAGGCCCAGGATaGTCACACTCAGCTCGATGG +
Preference number: 4 (lower is better)
Translates to: KKIYTLQSIHHGGCFEEARPGPG*SHSARW
Trigger: CCATCGAGCTGAGTGTGATCATCCTGGGCCTGGCCT...GGCCTCCTCAAAGCATCCACCATGGTGGATGGACTGAAGTGTGTATATTTTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000648957.1
CDS-3UTR TCA 90 bp CTTCAGTCCATCCACCATGGTGGATGCTTTGAGGAGGCCAAAGCACCATGGGGAATTAAAGTCCTCAGCTaGGAGATGGGCATCAGGGTA +
Preference number: 4 (lower is better)
Translates to: LQSIHHGGCFEEAKAPWGIKVLS*EMGIRV
Trigger: TACCCTGATGCCCATCTCTCAGCTGAGGACTTTAAT...TCCCCATGGTGCTTTGGCCTCCTCAAAGCATCCACCATGGTGGATGGACTGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000648957.1
CDS-3UTR TCA 90 bp CTGGATGGGCTCCTCCTCTCCAACTCTGGGGATTACATAACTGGCAGCAACTCCATTAAAGTCCTCAGCTaGGAGATGGGCATCAGGGTA +
Preference number: 4 (lower is better)
Translates to: LDGLLLSNSGDYITGSNSIKVLS*EMGIRV
Trigger: TACCCTGATGCCCATCTCTCAGCTGAGGACTTTAAT...GGAGTTGCTGCCAGTTATGTAATCCCCAGAGTTGGAGAGGAGGAGCCCATCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355552.8
ENST00000648957.1
CDS-3UTR TCA 90 bp ATCCACCATGGTGGATGCTTTGAGGAGGCCAAAGCACCATGGGGATGGGATGGAGGCTTTTACATGAGCTaGGAGGCCCCGATAAAGTAT +
Preference number: 4 (lower is better)
Translates to: IHHGGCFEEAKAPWGWDGGFYMS*EAPIKY
Trigger: ATACTTTATCGGGGCCTCTCAGCTCATGTAAAAGCC...TCCATCCCATCCCCATGGTGCTTTGGCCTCCTCAAAGCATCCACCATGGTGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355552.8
ENST00000648957.1
CDS-3UTR TCA 90 bp GTGCTTTGCTCTGATTTACTCCCATTTTCAGCCAACCACACCCATCCTTATGACGCGCTGGATGCCTACTaGCCTGGGAAGAGCAAACCC +
Preference number: 4 (lower is better)
Translates to: VLCSDLLPFSANHTHPYDALDAY*PGKSKP
Trigger: GGGTTTGCTCTTCCCAGGTCAGTAGGCATCCAGCGC...GTCATAAGGATGGGTGTGGTTGGCTGAAAATGGGAGTAAATCAGAGCAAAGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648957.1
CDS-3UTR GCA 90 bp AAATATACACACTTCAGTCCATCCACCATGGTGGATGCTTTGAGGAGGCCAAAGGTGGGGGTAGCGCTGTaGTCCCATTGGCCCAAGTCA +
Preference number: 4 (lower is better)
Translates to: KYTHFSPSTMVDALRRPKVGVAL*SHWPKS
Trigger: TGACTTGGGCCAATGGGAGCACAGCGCTACCCCCAC...CTTTGGCCTCCTCAAAGCATCCACCATGGTGGATGGACTGAAGTGTGTATATTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000648957.1
CDS-3UTR GCA 90 bp GTGCTTTGCTCTGATTTACTCCCATTTTCAGCCAACCACACCCATCCTTATGACGTGGGGGTAGCGCTGTaGTCCCATTGGCCCAAGTCA +
Preference number: 4 (lower is better)
Translates to: VLCSDLLPFSANHTHPYDVGVAL*SHWPKS
Trigger: TGACTTGGGCCAATGGGAGCACAGCGCTACCCCCAC...GTCATAAGGATGGGTGTGGTTGGCTGAAAATGGGAGTAAATCAGAGCAAAGCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355552.8
ENST00000648957.1
CDS-3UTR GCA 90 bp ACACTTCAGTCCATCCACCATGGTGGATGCTTTGAGGAGGCCAAAGCACCATGGATCCACCATGGTGGATaGTTTGAGGAGGCCAAAGCA +
Preference number: 4 (lower is better)
Translates to: TLQSIHHGGCFEEAKAPWIHHGG*FEEAKA
Trigger: TGCTTTGGCCTCCTCAAAGCATCCACCATGGTGGAT...CCATGGTGCTTTGGCCTCCTCAAAGCATCCACCATGGTGGATGGACTGAAGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000648957.1
CDS-3UTR GCA 90 bp AAGAAAATATACACACTTCAGTCCATCCACCATGGTGGATGCTTTGAGGAGGCCGAGAAGGCAGGGAGATaGGCTCCTTCAGCGGGGTCT +
Preference number: 4 (lower is better)
Translates to: KKIYTLQSIHHGGCFEEAEKAGR*APSAGS
Trigger: AGACCCCGCTGAAGGAGCGCATCTCCCTGCCTTCTC...GGCCTCCTCAAAGCATCCACCATGGTGGATGGACTGAAGTGTGTATATTTTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355552.8
ENST00000450633.6
ENST00000648957.1
CDS-3UTR GCA 90 bp CAGCAAACTTCGGCTGACACTGTGCCATCTTGGACTGCATGTGGATCTGATGGTCTTCGGCTGACACTGTaGCATCTTGGACTGCATGTG +
Preference number: 4 (lower is better)
Translates to: QQTSADTVPSWTACGSDGLRLTL*HLGLHV
Trigger: CACATGCAGTCCAAGATGGCACAGTGTCAGCCGAAG...ACCATCAGATCCACATGCAGTCCAAGATGGCACAGTGTCAGCCGAAGTTTGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355552.8
ENST00000648957.1
CDS-3UTR GCA 90 bp GCCCTCAGGCTCCTGAAAGGAACCAGCCCCAGTATTCCTGCAAAACCTCCACATCCATATATATGTAGCTaGAGGGGTGAAGCAGTCCTC +
Preference number: 4 (lower is better)
Translates to: ALRLLKGTSPSIPAKPPHPYICS*RGEAVL
Trigger: GAGGACTGCTTCACCCCTGCAGCTACATATATATGG...ATGTGGAGGTTTTGCAGGAATACTGGGGCTGGTTCCTTTCAGGAGCCTGAGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355552.8
ENST00000648957.1
CDS-3UTR CCA 90 bp AAGAAAATATACACACTTCAGTCCATCCACCATGGTGGATGCTTTGAGGAGGCCGACTTACTCTCCAGGTaGCCAAAGGCCAGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: KKIYTLQSIHHGGCFEEADLLSR*PKARPR
Trigger: CCTGGGCCTGGCCTTTGGCCACCTGGAGAGTAAGTC...GGCCTCCTCAAAGCATCCACCATGGTGGATGGACTGAAGTGTGTATATTTTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000648957.1
CDS-3UTR CCA 90 bp AAAATATACACACTTCAGTCCATCCACCATGGTGGATGCTTTGAGGAGGCCAAACTGGGGACTGCTCCTTaGTTGAGCAGAGGCCCCCTG +
Preference number: 4 (lower is better)
Translates to: KIYTLQSIHHGGCFEEAKLGTAP*LSRGPL
Trigger: CAGGGGGCCTCTGCTCAACCAAGGAGCAGTCCCCAG...TTTGGCCTCCTCAAAGCATCCACCATGGTGGATGGACTGAAGTGTGTATATTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000355552.8
ENST00000648957.1
CDS-3UTR CCA 90 bp CACTGCAGCCAGCAAACTTCGGCTGACACTGTGCCATCTTGGACTGCATGTGGACAAAGGGAGAGGGGCTaGCTCACAAAACATAGTTCT +
Preference number: 4 (lower is better)
Translates to: HCSQQTSADTVPSWTACGQRERG*LTKHSS
Trigger: AGAACTATGTTTTGTGAGCCAGCCCCTCTCCCTTTG...TCCACATGCAGTCCAAGATGGCACAGTGTCAGCCGAAGTTTGCTGGCTGCAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355552.8
ENST00000648957.1
CDS-3UTR TCA 90 bp AAATATACACACTTCAGTCCATCCACCATGGTGGATGCTTTGAGGAGGCCAAAGAGCAGAGCCCCTCGATaGTGTCGAAGCACAGCAGCA +
Preference number: 4 (lower is better)
Translates to: KYTHFSPSTMVDALRRPKSRAPR*CRSTAA
Trigger: TGCTGCTGTGCTTCGACATCATCGAGGGGCTCTGCT...CTTTGGCCTCCTCAAAGCATCCACCATGGTGGATGGACTGAAGTGTGTATATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000648957.1
CDS-3UTR TCA 90 bp CTTCAGTCCATCCACCATGGTGGATGCTTTGAGGAGGCCAAAGCACCATGGGGACCACTTGACATGGAATaGTCTCCAAGATCCATTGGA +
Preference number: 4 (lower is better)
Translates to: LQSIHHGGCFEEAKAPWGPLDME*SPRSIG
Trigger: TCCAATGGATCTTGGAGATCATTCCATGTCAAGTGG...TCCCCATGGTGCTTTGGCCTCCTCAAAGCATCCACCATGGTGGATGGACTGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355552.8
ENST00000648957.1
CDS-3UTR GCA 90 bp AAGAAAATATACACACTTCAGTCCATCCACCATGGTGGATGCTTTGAGGAGGCCTGCAGAGAAGGAGGGTaGCCTCAGCCAACCTTGCCA +
Preference number: 4 (lower is better)
Translates to: KKIYTLQSIHHGGCFEEACREGG*PQPTLP
Trigger: TGGCAAGGTTGGCTGAGGGCACCCTCCTTCTCTGCA...GGCCTCCTCAAAGCATCCACCATGGTGGATGGACTGAAGTGTGTATATTTTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000648957.1
CDS-3UTR GCA 90 bp AAAATATACACACTTCAGTCCATCCACCATGGTGGATGCTTTGAGGAGGCCAAAACACTCCCCAGCCCCTaGAGTAGGTTGAGCAGTGCC +
Preference number: 4 (lower is better)
Translates to: KIYTLQSIHHGGCFEEAKTLPSP*SRLSSA
Trigger: GGCACTGCTCAACCTACTGCAGGGGCTGGGGAGTGT...TTTGGCCTCCTCAAAGCATCCACCATGGTGGATGGACTGAAGTGTGTATATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000648957.1
CDS-3UTR GCA 90 bp CAGCAAACTTCGGCTGACACTGTGCCATCTTGGACTGCATGTGGATCTGATGGTTCTCTGCTCATTCACTaGAGCCAGCAAACTTCGGCT +
Preference number: 4 (lower is better)
Translates to: QQTSADTVPSWTACGSDGSLLIH*SQQTSA
Trigger: AGCCGAAGTTTGCTGGCTGCAGTGAATGAGCAGAGA...ACCATCAGATCCACATGCAGTCCAAGATGGCACAGTGTCAGCCGAAGTTTGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355552.8
ENST00000648957.1
CDS-3UTR GCA 90 bp AAGAAAATATACACACTTCAGTCCATCCACCATGGTGGATGCTTTGAGGAGGCCTATGGAGACCCTGGGTaGTTCAGGAGGGGGACAGAG +
Preference number: 4 (lower is better)
Translates to: KKIYTLQSIHHGGCFEEAYGDPG*FRRGTE
Trigger: CTCTGTCCCCCTCCTGAAGCACCCAGGGTCTCCATA...GGCCTCCTCAAAGCATCCACCATGGTGGATGGACTGAAGTGTGTATATTTTCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355552.8
ENST00000648957.1
CDS-3UTR CCA 90 bp AAATATACACACTTCAGTCCATCCACCATGGTGGATGCTTTGAGGAGGCCAAAGACCATGGGGATGGGATaGAGGCATTGGGAGAGCCAG +
Preference number: 4 (lower is better)
Translates to: KYTHFSPSTMVDALRRPKTMGMG*RHWESQ
Trigger: CTGGCTCTCCCAATGCCTCCATCCCATCCCCATGGT...CTTTGGCCTCCTCAAAGCATCCACCATGGTGGATGGACTGAAGTGTGTATATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000648957.1
CDS-3UTR CCA 90 bp CACTTCAGTCCATCCACCATGGTGGATGCTTTGAGGAGGCCAAAGCACCATGGGGTCCTCCACTTGACATaGAATGATCTCCAAGATCCA +
Preference number: 4 (lower is better)
Translates to: HFSPSTMVDALRRPKHHGVLHLT*NDLQDP
Trigger: TGGATCTTGGAGATCATTCCATGTCAAGTGGAGGAC...CCCATGGTGCTTTGGCCTCCTCAAAGCATCCACCATGGTGGATGGACTGAAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355552.8
ENST00000648957.1
CDS-3UTR TCA 90 bp GTGCTTTGCTCTGATTTACTCCCATTTTCAGCCAACCACACCCATCCTTATGACTTGGCCCCACAGACATaGGCTGTGTTGGAGCTTGTG +
Preference number: 4 (lower is better)
Translates to: VLCSDLLPFSANHTHPYDLAPQT*AVLELV
Trigger: CACAAGCTCCAACACAGCTCATGTCTGTGGGGCCAA...GTCATAAGGATGGGTGTGGTTGGCTGAAAATGGGAGTAAATCAGAGCAAAGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355552.8
ENST00000648957.1
CDS-3UTR GCA 90 bp CAGGGACAAGTGGGCCCCTCTCCCCTACTCATGCCTTATGATCCCAGTGCTTTGATAGTAAGTCCATTCTaGGTTTTAATGGAGCTGAGC +
Preference number: 4 (lower is better)
Translates to: QGQVGPSPLLMPYDPSALIVSPF*VLMELS
Trigger: GCTCAGCTCCATTAAAACGCAGAATGGACTTACTAT...CAAAGCACTGGGATCATAAGGCATGAGTAGGGGAGAGGGGCCCACTTGTCCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355552.8
ENST00000648957.1
CDS-3UTR GCA 90 bp CCTTACCCCGCTCACTCAGAATGCCGTGAGCTTGCCTTCCCTGATTACCAGGCTATAGTAAGTCCATTCTaGGTTTTAATGGAGCTGAGC +
Preference number: 4 (lower is better)
Translates to: PYPAHSECRELAFPDYQAIVSPF*VLMELS
Trigger: GCTCAGCTCCATTAAAACGCAGAATGGACTTACTAT...AGCCTGGTAATCAGGGAAGGCAAGCTCACGGCATTCTGAGTGAGCGGGGTAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355552.8
ENST00000648957.1
CDS-3UTR GCA 90 bp CCAACCCTTACCCCGCTCACTCAGAATGCCGTGAGCTTGCCTTCCCTGATTACCCTAATTAAGACTGTGTaGTCCAGCAATTCTACTTGC +
Preference number: 4 (lower is better)
Translates to: PTLTPLTQNAVSLPSLITLIKTV*SSNSTC
Trigger: GCAAGTAGAATTGCTGGAGCACACAGTCTTAATTAG...GGTAATCAGGGAAGGCAAGCTCACGGCATTCTGAGTGAGCGGGGTAAGGGTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355552.8
ENST00000648957.1
CDS-3UTR CCA 90 bp ATCAAGAAAATATACACACTTCAGTCCATCCACCATGGTGGATGCTTTGAGGAGCAGTATGAGAGCAGGTaGGAAGGGGAGGAGGGTCCC +
Preference number: 4 (lower is better)
Translates to: IKKIYTLQSIHHGGCFEEQYESR*EGEEGP
Trigger: GGGACCCTCCTCCCCTTCCCACCTGCTCTCATACTG...CTCCTCAAAGCATCCACCATGGTGGATGGACTGAAGTGTGTATATTTTCTTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000648957.1
CDS-3UTR CCA 90 bp TGTGAACACAGGATGGCTCTGGAAGGTTATGGAGACCCTGGGTGCTTCAGGAGGATCTCCAAGATCCATTaGAGTGAGCTACAGGACATT +
Preference number: 4 (lower is better)
Translates to: CEHRMALEGYGDPGCFRRISKIH*SELQDI
Trigger: AATGTCCTGTAGCTCACTCCAATGGATCTTGGAGAT...CCTCCTGAAGCACCCAGGGTCTCCATAACCTTCCAGAGCCATCCTGTGTTCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355552.8
ENST00000648957.1
CDS-3UTR TCA 90 bp AAATATACACACTTCAGTCCATCCACCATGGTGGATGCTTTGAGGAGGCCAAAGACACATCCGTTGGTGTaGACACAGGATGGCTCTGGA +
Preference number: 4 (lower is better)
Translates to: KYTHFSPSTMVDALRRPKTHPLV*TQDGSG
Trigger: TCCAGAGCCATCCTGTGTTCACACCAACGGATGTGT...CTTTGGCCTCCTCAAAGCATCCACCATGGTGGATGGACTGAAGTGTGTATATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355552.8
ENST00000648957.1
CDS-3UTR TCA 90 bp AAAATATACACACTTCAGTCCATCCACCATGGTGGATGCTTTGAGGAGGCCAAACTAGTCCTTATCAGATaGCCTCTGGGCAGCCAGCTG +
Preference number: 4 (lower is better)
Translates to: KIYTLQSIHHGGCFEEAKLVLIR*PLGSQL
Trigger: CAGCTGGCTGCCCAGAGGTCATCTGATAAGGACTAG...TTTGGCCTCCTCAAAGCATCCACCATGGTGGATGGACTGAAGTGTGTATATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648957.1
CDS-3UTR GCA 90 bp ATCAAGAAAATATACACACTTCAGTCCATCCACCATGGTGGATGCTTTGAGGAGTGCAGAGAAGGAGGGTaGCCTCAGCCAACCTTGCCA +
Preference number: 4 (lower is better)
Translates to: IKKIYTLQSIHHGGCFEECREGG*PQPTLP
Trigger: TGGCAAGGTTGGCTGAGGGCACCCTCCTTCTCTGCA...CTCCTCAAAGCATCCACCATGGTGGATGGACTGAAGTGTGTATATTTTCTTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000648957.1
CDS-3UTR GCA 90 bp TGTGAACACAGGATGGCTCTGGAAGGTTATGGAGACCCTGGGTGCTTCAGGAGGATGATCCCAGTGCTTTaGTCTGATTTACTCCCATTT +
Preference number: 4 (lower is better)
Translates to: CEHRMALEGYGDPGCFRRMIPVL*SDLLPF
Trigger: AAATGGGAGTAAATCAGAGCAAAGCACTGGGATCAT...CCTCCTGAAGCACCCAGGGTCTCCATAACCTTCCAGAGCCATCCTGTGTTCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355552.8
ENST00000648957.1
CDS-3UTR GCA 90 bp CAGTCCATCCACCATGGTGGATGCTTTGAGGAGGCCAAAGCACCATGGGGATGGTCCAGCAATTCTACTTaGATGAGTTACCAAAAGCAA +
Preference number: 4 (lower is better)
Translates to: QSIHHGGCFEEAKAPWGWSSNST*MSYQKQ
Trigger: TTGCTTTTGGTAACTCATGCAAGTAGAATTGCTGGA...CCATCCCCATGGTGCTTTGGCCTCCTCAAAGCATCCACCATGGTGGATGGACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355552.8
ENST00000648957.1
CDS-3UTR CCA 90 bp ATCAAGAAAATATACACACTTCAGTCCATCCACCATGGTGGATGCTTTGAGGAGTCACACTCAGCTCGATaGCCAGCAGGAAGAAGCGGG +
Preference number: 4 (lower is better)
Translates to: IKKIYTLQSIHHGGCFEESHSAR*PAGRSG
Trigger: CCCGCTTCTTCCTGCTGGCCATCGAGCTGAGTGTGA...CTCCTCAAAGCATCCACCATGGTGGATGGACTGAAGTGTGTATATTTTCTTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000648957.1
CDS-3UTR CCA 90 bp CTTCTCCGCATTTTACAGATGGCAATAGTAAGTCCATTCTGCGTTTTAATGGAGGACTTACTCTCCAGGTaGCCAAAGGCCAGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: LLRILQMAIVSPFCVLMEDLLSR*PKARPR
Trigger: CCTGGGCCTGGCCTTTGGCCACCTGGAGAGTAAGTC...CTCCATTAAAACGCAGAATGGACTTACTATTGCCATCTGTAAAATGCGGAGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355552.8
ENST00000648957.1
CDS-3UTR TCA 90 bp AAAATATACACACTTCAGTCCATCCACCATGGTGGATGCTTTGAGGAGGCCAAATCCAGAGCAGGAAGATaGGGAAGAGCACATTGGGGA +
Preference number: 4 (lower is better)
Translates to: KIYTLQSIHHGGCFEEAKSRAGR*GRAHWG
Trigger: TCCCCAATGTGCTCTTCCTCATCTTCCTGCTCTGGA...TTTGGCCTCCTCAAAGCATCCACCATGGTGGATGGACTGAAGTGTGTATATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000648957.1
CDS-3UTR TCA 90 bp ATCAAGAAAATATACACACTTCAGTCCATCCACCATGGTGGATGCTTTGAGGAGCCATGGTGGATGCTTTaGGGAGGCCAAAGCACCATG +
Preference number: 4 (lower is better)
Translates to: IKKIYTLQSIHHGGCFEEPWWML*GGQSTM
Trigger: CATGGTGCTTTGGCCTCCTCAAAGCATCCACCATGG...CTCCTCAAAGCATCCACCATGGTGGATGGACTGAAGTGTGTATATTTTCTTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000648957.1
CDS-3UTR GCA 90 bp ATCAAGAAAATATACACACTTCAGTCCATCCACCATGGTGGATGCTTTGAGGAGACCGGACCCTGGAGGTaGCAATGTCTTCGTAGAGCA +
Preference number: 4 (lower is better)
Translates to: IKKIYTLQSIHHGGCFEETGPWR*QCLRRA
Trigger: TGCTCTACGAAGACATTGGCACCTCCAGGGTCCGGT...CTCCTCAAAGCATCCACCATGGTGGATGGACTGAAGTGTGTATATTTTCTTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000648957.1
CDS-3UTR GCA 90 bp AAGAAAATATACACACTTCAGTCCATCCACCATGGTGGATGCTTTGAGGAGGCCCTTATCAGCAACAGTTaGAGCGTTCGAGGTGCTCAC +
Preference number: 4 (lower is better)
Translates to: KKIYTLQSIHHGGCFEEALISNS*SVRGAH
Trigger: GTGAGCACCTCGAACGCTGCAACTGTTGCTGATAAG...GGCCTCCTCAAAGCATCCACCATGGTGGATGGACTGAAGTGTGTATATTTTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000648957.1
CDS-3UTR GCA 90 bp CTATTCTTGAGGCTAAAAATAAGAGCTATCCTTATCGTTCATTACTGTACGCCACCAGCCCTGCCCTCGTaGCAAGGGTGCAGAGAAGGA +
Preference number: 4 (lower is better)
Translates to: LFLRLKIRAILIVHYCTPPALPS*QGCREG
Trigger: TCCTTCTCTGCACCCTTGGCACGAGGGCAGGGCTGG...TGGCGTACAGTAATGAACGATAAGGATAGCTCTTATTTTTAGCCTCAAGAATAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355552.8
ENST00000648957.1
CDS-3UTR GCA 90 bp AAGAAAATATACACACTTCAGTCCATCCACCATGGTGGATGCTTTGAGGAGGCCTGGGGGCCTACTATGTaGCAAGCACTATTCTTGAGG +
Preference number: 4 (lower is better)
Translates to: KKIYTLQSIHHGGCFEEAWGPTM*QALFLR
Trigger: CCTCAAGAATAGTGCTTGGCACATAGTAGGCCCCCA...GGCCTCCTCAAAGCATCCACCATGGTGGATGGACTGAAGTGTGTATATTTTCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355552.8
ENST00000648957.1
CDS-3UTR GCA 90 bp CTTCTCCGCATTTTACAGATGGCAATAGTAAGTCCATTCTGCGTTTTAATGGAGTCGTCCAGCCCAAATTaGGAAAACGGCCACAGTCCC +
Preference number: 4 (lower is better)
Translates to: LLRILQMAIVSPFCVLMESSSPN*ENGHSP
Trigger: GGGACTGTGGCCGTTTTCGCAATTTGGGCTGGACGA...CTCCATTAAAACGCAGAATGGACTTACTATTGCCATCTGTAAAATGCGGAGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000355552.8
CDS-3UTR GCA 90 bp GTGCTTTGCTCTGATTTACTCCCATTTTCAGCCAACCACACCCATCCTTATGACCAGCCCCAGTATTCCTaGAAAACCTCCACATTAGCA +
Preference number: 4 (lower is better)
Translates to: VLCSDLLPFSANHTHPYDQPQYS*KTSTLA
Trigger: TGCTAATGTGGAGGTTTTGCAGGAATACTGGGGCTG...GTCATAAGGATGGGTGTGGTTGGCTGAAAATGGGAGTAAATCAGAGCAAAGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355552.8
ENST00000648957.1
CDS-3UTR GCA 90 bp AAATATACACACTTCAGTCCATCCACCATGGTGGATGCTTTGAGGAGGCCAAAGCCATATATATGTAGCTaGAGGGGTGAAGCAGTCCTC +
Preference number: 4 (lower is better)
Translates to: KYTHFSPSTMVDALRRPKPYICS*RGEAVL
Trigger: GAGGACTGCTTCACCCCTGCAGCTACATATATATGG...CTTTGGCCTCCTCAAAGCATCCACCATGGTGGATGGACTGAAGTGTGTATATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355552.8
ENST00000648957.1
CDS-3UTR CCA 90 bp CTTCTCCGCATTTTACAGATGGCAATAGTAAGTCCATTCTGCGTTTTAATGGAGAGGAGAAGAGGATCTTaGGCTCCGAGCCGAAGAAGC +
Preference number: 4 (lower is better)
Translates to: LLRILQMAIVSPFCVLMERRRGS*APSRRS
Trigger: GCTTCTTCGGCTCGGAGCCCAAGATCCTCTTCTCCT...CTCCATTAAAACGCAGAATGGACTTACTATTGCCATCTGTAAAATGCGGAGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355552.8
ENST00000648957.1
CDS-3UTR CCA 90 bp ATCAAGAAAATATACACACTTCAGTCCATCCACCATGGTGGATGCTTTGAGGAGAAAGCACCATGGGGATaGGATGGAGGCATTGGGAGA +
Preference number: 4 (lower is better)
Translates to: IKKIYTLQSIHHGGCFEEKAPWG*DGGIGR
Trigger: TCTCCCAATGCCTCCATCCCATCCCCATGGTGCTTT...CTCCTCAAAGCATCCACCATGGTGGATGGACTGAAGTGTGTATATTTTCTTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000648957.1
CDS-3UTR TCA 90 bp CTATTCTTGAGGCTAAAAATAAGAGCTATCCTTATCGTTCATTACTGTACGCCATGGCCAGCACCCGCTTaGTGCTGGACTTACTCTCCA +
Preference number: 4 (lower is better)
Translates to: LFLRLKIRAILIVHYCTPWPAPA*CWTYSP
Trigger: TGGAGAGTAAGTCCAGCATCAAGCGGGTGCTGGCCA...TGGCGTACAGTAATGAACGATAAGGATAGCTCTTATTTTTAGCCTCAAGAATAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355552.8
ENST00000648957.1
CDS-3UTR GCA 90 bp CTATTCTTGAGGCTAAAAATAAGAGCTATCCTTATCGTTCATTACTGTACGCCACAGAGTCGAACTGCGTaGTCGAGTAGCTGGCAGCTG +
Preference number: 4 (lower is better)
Translates to: LFLRLKIRAILIVHYCTPQSRTA*SSSWQL
Trigger: CAGCTGCCAGCTACTCGAGCACGCAGTTCGACTCTG...TGGCGTACAGTAATGAACGATAAGGATAGCTCTTATTTTTAGCCTCAAGAATAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355552.8
ENST00000648957.1
CDS-3UTR GCA 90 bp CTATTCTTGAGGCTAAAAATAAGAGCTATCCTTATCGTTCATTACTGTACGCCATGCAGAGAAGGAGGGTaGCCTCAGCCAACCTTGCCA +
Preference number: 4 (lower is better)
Translates to: LFLRLKIRAILIVHYCTPCREGG*PQPTLP
Trigger: TGGCAAGGTTGGCTGAGGGCACCCTCCTTCTCTGCA...TGGCGTACAGTAATGAACGATAAGGATAGCTCTTATTTTTAGCCTCAAGAATAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355552.8
ENST00000648957.1
CDS-3UTR GCA 90 bp CTATTCTTGAGGCTAAAAATAAGAGCTATCCTTATCGTTCATTACTGTACGCCAGGCCCCGATAAAGTATaGCATTCAGGGGCACCCTGC +
Preference number: 4 (lower is better)
Translates to: LFLRLKIRAILIVHYCTPGPDKV*HSGAPC
Trigger: GCAGGGTGCCCCTGAATGGCATACTTTATCGGGGCC...TGGCGTACAGTAATGAACGATAAGGATAGCTCTTATTTTTAGCCTCAAGAATAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000355552.8
ENST00000648957.1
CDS-3UTR CCA 90 bp CCAATGGAGAAAAACAACATATATTGGAGGACAACTATTGATCTCTGCAGAAGACAGTTGGCTGTGTCCTaGATGGGCTCCTCCTCTCCA +
Preference number: 4 (lower is better)
Translates to: PMEKNNIYWRTTIDLCRRQLAVS*MGSSSP
Trigger: TGGAGAGGAGGAGCCCATCCAGGACACAGCCAACTG...TCTTCTGCAGAGATCAATAGTTGTCCTCCAATATATGTTGTTTTTCTCCATTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355552.8
ENST00000648957.1
CDS-3UTR TCA 90 bp CTATTCTTGAGGCTAAAAATAAGAGCTATCCTTATCGTTCATTACTGTACGCCAGAGCAAACCCCAAGGTaGTGTGTCCTGGAGCAAGTC +
Preference number: 4 (lower is better)
Translates to: LFLRLKIRAILIVHYCTPEQTPR*CVLEQV
Trigger: GACTTGCTCCAGGACACATCACCTTGGGGTTTGCTC...TGGCGTACAGTAATGAACGATAAGGATAGCTCTTATTTTTAGCCTCAAGAATAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000648957.1
CDS-3UTR GCA 90 bp CCAATGGAGAAAAACAACATATATTGGAGGACAACTATTGATCTCTGCAGAAGAGCAGAGAGAACCGGCTaGCCAAGACAACAGTGTGTG +
Preference number: 4 (lower is better)
Translates to: PMEKNNIYWRTTIDLCRRAERTG*PRQQCV
Trigger: CACACACTGTTGTCTTGGGCAGCCGGTTCTCTCTGC...TCTTCTGCAGAGATCAATAGTTGTCCTCCAATATATGTTGTTTTTCTCCATTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355552.8
ENST00000648957.1
CDS-3UTR CCA 90 bp CTTCTCCGCATTTTACAGATGGCAATAGTAAGTCCATTCTGCGTTTTAATGGAGAACACAGGATGGCTCTaGAAGGTTATGGAGACCCTG +
Preference number: 4 (lower is better)
Translates to: LLRILQMAIVSPFCVLMENTGWL*KVMETL
Trigger: CAGGGTCTCCATAACCTTCCAGAGCCATCCTGTGTT...CTCCATTAAAACGCAGAATGGACTTACTATTGCCATCTGTAAAATGCGGAGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355552.8
ENST00000648957.1
CDS-3UTR GCA 90 bp AAATATACACACTTCAGTCCATCCACCATGGTGGATGCTTTGAGGAGGCCAAAGTCCAGCAATTCTACTTaGATGAGTTACCAAAAGCAA +
Preference number: 4 (lower is better)
Translates to: KYTHFSPSTMVDALRRPKSSNST*MSYQKQ
Trigger: TTGCTTTTGGTAACTCATGCAAGTAGAATTGCTGGA...CTTTGGCCTCCTCAAAGCATCCACCATGGTGGATGGACTGAAGTGTGTATATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355552.8
ENST00000648957.1
CDS-3UTR GCA 90 bp ATCAAGAAAATATACACACTTCAGTCCATCCACCATGGTGGATGCTTTGAGGAGATGATCCCAGTGCTTTaGTCTGATTTACTCCCATTT +
Preference number: 4 (lower is better)
Translates to: IKKIYTLQSIHHGGCFEEMIPVL*SDLLPF
Trigger: AAATGGGAGTAAATCAGAGCAAAGCACTGGGATCAT...CTCCTCAAAGCATCCACCATGGTGGATGGACTGAAGTGTGTATATTTTCTTGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355552.8
ENST00000648957.1
CDS-3UTR CCA 90 bp CCAATGGAGAAAAACAACATATATTGGAGGACAACTATTGATCTCTGCAGAAGAATCTCCAAGATCCATTaGAGTGAGCTACAGGACATT +
Preference number: 4 (lower is better)
Translates to: PMEKNNIYWRTTIDLCRRISKIH*SELQDI
Trigger: AATGTCCTGTAGCTCACTCCAATGGATCTTGGAGAT...TCTTCTGCAGAGATCAATAGTTGTCCTCCAATATATGTTGTTTTTCTCCATTGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355552.8
ENST00000648957.1
CDS CCA 90 bp GCACAGGCCGCGGGACTCCGGCCTCCAGCGCCAGACCAGGCGGCCTaGGCCGGGAAGCGTCGCGCAAGGACCGGGCGCGACCGGCTCCGT +
Preference number: 5 (lower is better)
Translates to: AQAAGLRPPAPDQAA*AGKRRARTGRDRLR
Trigger: ACGGAGCCGGTCGCGCCCGGTCCTTGCGCGACGCTTCCCGGCCCAGGCCGCCTGGTCTGGCGCTGGAGGCCGGAGTCCCGCGGCCTGTGC
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000469111.5
ENST00000483868.5
ENST00000489960.5
CDS TCA 90 bp CCGGGAAGCGTCGCGCAAGGACCGGGCGCGACCGGCTCCGTGGAATaGGGGCTAGGCAGGAAAGGCGAGGCGGGGTCAGCTCGCCGGGCC +
Preference number: 5 (lower is better)
Translates to: PGSVAQGPGATGSVE*GLGRKGEAGSARRA
Trigger: GGCCCGGCGAGCTGACCCCGCCTCGCCTTTCCTGCCTAGCCCTCATTCCACGGAGCCGGTCGCGCCCGGTCCTTGCGCGACGCTTCCCGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000469111.5
ENST00000483868.5
CDS GCA 90 bp GCGAGGCGGGGTCAGCTCGCCGGGCCGCGGGTCTCGCGGACACCCTaGAGCCCTTCCCGACAGCGGCGACCGGGAAAGCAAGACCGTCTT +
Preference number: 5 (lower is better)
Translates to: ARRGQLAGPRVSRTP*SPSRQRRPGKQDRL
Trigger: AAGACGGTCTTGCTTTCCCGGTCGCCGCTGTCGGGAAGGGCTGCAGGGTGTCCGCGAGACCCGCGGCCCGGCGAGCTGACCCCGCCTCGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000469111.5
ENST00000483868.5
CDS CCA 90 bp GCCACCTCTCGCCCTACGCGCCTTCCAGCTGGCAGCAGTTGTCAGTaGACCAGCTGGCGGCAGCCGCGCTCCACCTCCCGGCCTGGGCCG +
Preference number: 5 (lower is better)
Translates to: ATSRPTRLPAGSSCQ*TSWRQPRSTSRPGP
Trigger: CGGCCCAGGCCGGGAGGTGGAGCGCGGCTGCCGCCAGCTGGTCCACTGACAACTGCTGCCAGCTGGAAGGCGCGTAGGGCGAGAGGTGGC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490290.5
CDS GCA 90 bp CGGACAGGGTGGGTCGTGAGGTCCCACCCTGGACAGGCCAGGCTCTaGCTCCAGCACCTACTACCCTCAAGCCTGGTGTGTCCCCCGGGG +
Preference number: 5 (lower is better)
Translates to: RTGWVVRSHPGQARL*LQHLLPSSLVCPPG
Trigger: CCCCGGGGGACACACCAGGCTTGAGGGTAGTAGGTGCTGGAGGCAGAGCCTGGCCTGTCCAGGGTGGGACCTCACGACCCACCCTGTCCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000465915.1
CDS CCA 90 bp CCTCCGAGCTGGGGGCCGGACAGGGTGGGTCGTGAGGTCCCACCCTaGACAGGCCAGGCTCTGCCTCCAGCACCTACTACCCTCAAGCCT +
Preference number: 5 (lower is better)
Translates to: PPSWGPDRVGREVPP*TGQALPPAPTTLKP
Trigger: AGGCTTGAGGGTAGTAGGTGCTGGAGGCAGAGCCTGGCCTGTCCAGGGTGGGACCTCACGACCCACCCTGTCCGGCCCCCAGCTCGGAGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000465915.1
CDS CCA 90 bp GGAAAGCTGAGGACGCGCCACCTCTCGCCCTACGCGCCTTCCAGCTaGCAGCAGTTGTCAGTGGACCAGCTGGCGGCAGCCGCGCTCCAC +
Preference number: 5 (lower is better)
Translates to: GKLRTRHLSPYAPSS*QQLSVDQLAAAALH
Trigger: GTGGAGCGCGGCTGCCGCCAGCTGGTCCACTGACAACTGCTGCCAGCTGGAAGGCGCGTAGGGCGAGAGGTGGCGCGTCCTCAGCTTTCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000489960.5
ENST00000490290.5
CDS CCA 90 bp GAGCAGTGCCAGGATGCCCGCATACACGTAGAAGCTCCTCCGAGCTaGGGGCCGGACAGGGTGGGTCGTGAGGTCCCACCCTGGACAGGC +
Preference number: 5 (lower is better)
Translates to: EQCQDARIHVEAPPS*GPDRVGREVPPWTG
Trigger: GCCTGTCCAGGGTGGGACCTCACGACCCACCCTGTCCGGCCCCCAGCTCGGAGGAGCTTCTACGTGTATGCGGGCATCCTGGCACTGCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465915.1
CDS-3UTR CAA 90 bp CGGCAGAGTCGAACTGCGTGCTCGAGTAGCTGGCAGCTGAGGCCCCAGCAGCCCAGCGCTGTGCTCCCATaGGCCCAAGTCACCTCCTCC +
Preference number: 5 (lower is better)
Translates to: RQSRTACSSSWQLRPQQPSAVLP*AQVTSS
Trigger: GGAGGAGGTGACTTGGGCCAATGGGAGCACAGCGCT...GGGCTGCTGGGGCCTCAGCTGCCAGCTACTCGAGCACGCAGTTCGACTCTGCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393400.6
ENST00000483868.5
CDS-3UTR CAA 90 bp GGGATTGGGAGCCCCAGGGAGGTGGGGCCTCCAGACTCATGGTGGGAACAGGGCAGCGCTGTGCTCCCATaGGCCCAAGTCACCTCCTCC +
Preference number: 5 (lower is better)
Translates to: GIGSPREVGPPDSWWEQGSAVLP*AQVTSS
Trigger: GGAGGAGGTGACTTGGGCCAATGGGAGCACAGCGCT...GCCCTGTTCCCACCATGAGTCTGGAGGCCCCACCTCCCTGGGGCTCCCAATCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000483868.5
ENST00000489960.5
ENST00000648957.1
CDS-3UTR CAA 90 bp GGGATTGGGAGCCCCAGGGAGGTGGGGCCTCCAGACTCATGGTGGGAACAGGGCAGCTGCCCTCAGGCATaGATGGCCTTCCAGCGCTCG +
Preference number: 5 (lower is better)
Translates to: GIGSPREVGPPDSWWEQGSCPQA*MAFQRS
Trigger: CGAGCGCTGGAAGGCCATCAATGCCTGAGGGCAGCT...GCCCTGTTCCCACCATGAGTCTGGAGGCCCCACCTCCCTGGGGCTCCCAATCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000483868.5
ENST00000489960.5
ENST00000648957.1
CDS-3UTR CAA 90 bp GGGATTGGGAGCCCCAGGGAGGTGGGGCCTCCAGACTCATGGTGGGAACAGGGCCCCACAGAACGTCCCTaGACCTGGTCCTCCTCCCCT +
Preference number: 5 (lower is better)
Translates to: GIGSPREVGPPDSWWEQGPTERP*TWSSSP
Trigger: AGGGGAGGAGGACCAGGTCAAGGGACGTTCTGTGGG...GCCCTGTTCCCACCATGAGTCTGGAGGCCCCACCTCCCTGGGGCTCCCAATCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000483868.5
ENST00000489960.5
ENST00000648957.1
CDS-3UTR CAA 90 bp GGAGCCCCAGGGAGGTGGGGCCTCCAGACTCATGGTGGGAACAGGGCCACACAGAGATGGCAAAGGGGATaGGGAGCCCCAGGGAGGTGG +
Preference number: 5 (lower is better)
Translates to: GAPGRWGLQTHGGNRATQRWQRG*GAPGRW
Trigger: CCACCTCCCTGGGGCTCCCAATCCCCTTTGCCATCT...CTGTGTGGCCCTGTTCCCACCATGAGTCTGGAGGCCCCACCTCCCTGGGGCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000483868.5
ENST00000489960.5
ENST00000648957.1
CDS-3UTR CAA 90 bp GGGAGAGCCAGCCCTGCCCTCGTGCCAAGGGTGCAGAGAAGGAGGGTGCCCTCAAGCCCCTGCAGTAGGTaGAGCAGTGCCAGGATGCCC +
Preference number: 5 (lower is better)
Translates to: GRASPALVPRVQRRRVPSSPCSR*SSARMP
Trigger: GGGCATCCTGGCACTGCTCAACCTACTGCAGGGGCT...TGAGGGCACCCTCCTTCTCTGCACCCTTGGCACGAGGGCAGGGCTGGCTCTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000489960.5
ENST00000648957.1
CDS CCA 90 bp GAGCCACCGCGCCCGGCCTCTGTTGTCTTGTCAGCAAAATGGCCCTaGTGTGACCGAGGTCACGCAGCCAGCAAGTGTCGTCGGGTCCCC +
Preference number: 5 (lower is better)
Translates to: EPPRPASVVLSAKWP*CDRGHAASKCRRVP
Trigger: GGGGACCCGACGACACTTGCTGGCTGCGTGACCTCGGTCACACCAGGGCCATTTTGCTGACAAGACAACAGAGGCCGGGCGCGGTGGCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462228.1
ENST00000648957.1
CDS-3UTR CAA 90 bp GCTCACTGGCCGTACTGTTGGCCCTGTCCGCTATCAACCCTCCAGGCCCTCCCAGGGACTGCTCCTTGGTaGAGCAGAGGCCCCCTGAGC +
Preference number: 5 (lower is better)
Translates to: AHWPYCWPCPLSTLQALPGTAPW*SRGPLS
Trigger: GCTCAGGGGGCCTCTGCTCAACCAAGGAGCAGTCCC...TGGGAGGGCCTGGAGGGTTGATAGCGGACAGGGCCAACAGTACGGCCAGTGAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355552.8
ENST00000648957.1
CDS TCA 90 bp ACCGCGCCCGGCCTCTGTTGTCTTGTCAGCAAAATGGCCCTGGTGTaGCCGAGGTCACGCAGCCAGCAAGTGTCGTCGGGTCCCCTGGAG +
Preference number: 5 (lower is better)
Translates to: TAPGLCCLVSKMALV*PRSRSQQVSSGPLE
Trigger: CTCCAGGGGACCCGACGACACTTGCTGGCTGCGTGACCTCGGTCACACCAGGGCCATTTTGCTGACAAGACAACAGAGGCCGGGCGCGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000462228.1
ENST00000648957.1
CDS CCA 90 bp CTGTATGCATACACAGCCTCTCAGCTTCAATCCTCACACCCATGCTaGAAGAAGGCGCAGTTCCGCCGGCAGCCACGCGGGGGCGCCGGC +
Preference number: 5 (lower is better)
Translates to: LYAYTASQLQSSHPC*KKAQFRRQPRGGAG
Trigger: GCCGGCGCCCCCGCGTGGCTGCCGGCGGAACTGCGCCTTCTTCCAGCATGGGTGTGAGGATTGAAGCTGAGAGGCTGTGTATGCATACAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000465915.1
CDS-3UTR CAA 90 bp GGGAGAGCCAGCCCTGCCCTCGTGCCAAGGGTGCAGAGAAGGAGGGTGCCCTCATCGCTGTCTGTGCTGTaGATGCTGCCAGTGTGGCAG +
Preference number: 5 (lower is better)
Translates to: GRASPALVPRVQRRRVPSSLSVL*MLPVWQ
Trigger: CTGCCACACTGGCAGCATCAACAGCACAGACAGCGA...TGAGGGCACCCTCCTTCTCTGCACCCTTGGCACGAGGGCAGGGCTGGCTCTCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000483868.5
ENST00000489960.5
ENST00000648957.1
CDS-3UTR CAA 90 bp AGGCCACCCCGCCGGCAGAGTCGAACTGCGTGCTCGAGTAGCTGGCAGCTGAGGTCGCTGTCTGTGCTGTaGATGCTGCCAGTGTGGCAG +
Preference number: 5 (lower is better)
Translates to: RPPRRQSRTACSSSWQLRSLSVL*MLPVWQ
Trigger: CTGCCACACTGGCAGCATCAACAGCACAGACAGCGA...CCTCAGCTGCCAGCTACTCGAGCACGCAGTTCGACTCTGCCGGCGGGGTGGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393400.6
ENST00000483868.5
CDS-3UTR CAA 90 bp GCTCACTGGCCGTACTGTTGGCCCTGTCCGCTATCAACCCTCCAGGCCCTCCCAAGCTGCCCTCAGGCATaGATGGCCTTCCAGCGCTCG +
Preference number: 5 (lower is better)
Translates to: AHWPYCWPCPLSTLQALPSCPQA*MAFQRS
Trigger: CGAGCGCTGGAAGGCCATCAATGCCTGAGGGCAGCT...TGGGAGGGCCTGGAGGGTTGATAGCGGACAGGGCCAACAGTACGGCCAGTGAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355552.8
ENST00000648957.1
CDS-3UTR CAA 90 bp GGAGCCCCAGGGAGGTGGGGCCTCCAGACTCATGGTGGGAACAGGGCCACACAGTCCTTCAGCGGGGTCTaGGGAAGGATGACCACCAGA +
Preference number: 5 (lower is better)
Translates to: GAPGRWGLQTHGGNRATQSFSGV*GRMTTR
Trigger: TCTGGTGGTCATCCTTCCCAAGACCCCGCTGAAGGA...CTGTGTGGCCCTGTTCCCACCATGAGTCTGGAGGCCCCACCTCCCTGGGGCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000355552.8
ENST00000450633.6
ENST00000483868.5
ENST00000489960.5
ENST00000648957.1
CDS-3UTR CAA 90 bp AGGCCCTGGCAGCTGCCCTCAGGCATTGATGGCCTTCCAGCGCTCGCTGTCTGTAGCCCCTGCAGTAGGTaGAGCAGTGCCAGGATGCCC +
Preference number: 5 (lower is better)
Translates to: RPWQLPSGIDGLPALAVCSPCSR*SSARMP
Trigger: GGGCATCCTGGCACTGCTCAACCTACTGCAGGGGCT...ACAGACAGCGAGCGCTGGAAGGCCATCAATGCCTGAGGGCAGCTGCCAGGGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393400.6
CDS TCA 90 bp TGCGTTTCTCACTCGGAAAGCGGGCGGAATCGAAGACTGGAAAGCTaGGGACGCGCCACCTCTCGCCCTACGCGCCTTCCAGCTGGCAGC +
Preference number: 5 (lower is better)
Translates to: CVSHSESGRNRRLES*GRATSRPTRLPAGS
Trigger: GCTGCCAGCTGGAAGGCGCGTAGGGCGAGAGGTGGCGCGTCCTCAGCTTTCCAGTCTTCGATTCCGCCCGCTTTCCGAGTGAGAAACGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000489960.5
ENST00000490290.5
CDS GCA 90 bp GCACTGTATGCATACACAGCCTCTCAGCTTCAATCCTCACACCCATaGTGGAAGAAGGCGCAGTTCCGCCGGCAGCCACGCGGGGGCGCC +
Preference number: 5 (lower is better)
Translates to: ALYAYTASQLQSSHP*WKKAQFRRQPRGGA
Trigger: GGCGCCCCCGCGTGGCTGCCGGCGGAACTGCGCCTTCTTCCAGCATGGGTGTGAGGATTGAAGCTGAGAGGCTGTGTATGCATACAGTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000465915.1
CDS CCA 90 bp GAGAGGCCTGCGTTTCTCACTCGGAAAGCGGGCGGAATCGAAGACTaGAAAGCTGAGGACGCGCCACCTCTCGCCCTACGCGCCTTCCAG +
Preference number: 5 (lower is better)
Translates to: ERPAFLTRKAGGIED*KAEDAPPLALRAFQ
Trigger: CTGGAAGGCGCGTAGGGCGAGAGGTGGCGCGTCCTCAGCTTTCCAGTCTTCGATTCCGCCCGCTTTCCGAGTGAGAAACGCAGGCCTCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000489960.5
ENST00000490290.5
CDS-3UTR CAA 90 bp GTGGGAACAGGGCCACACAGGGCTACTGCCCACAGAACGTCCCTTGACCTGGTCCCCACAGAACGTCCCTaGACCTGGTCCTCCTCCCCT +
Preference number: 5 (lower is better)
Translates to: VGTGPHRATAHRTSLDLVPTERP*TWSSSP
Trigger: AGGGGAGGAGGACCAGGTCAAGGGACGTTCTGTGGG...GACCAGGTCAAGGGACGTTCTGTGGGCAGTAGCCCTGTGTGGCCCTGTTCCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000483868.5
ENST00000489960.5
ENST00000648957.1
CDS-3UTR CAA 90 bp GTGGGAACAGGGCCACACAGGGCTACTGCCCACAGAACGTCCCTTGACCTGGTCAGATGGCAAAGGGGATaGGGAGCCCCAGGGAGGTGG +
Preference number: 5 (lower is better)
Translates to: VGTGPHRATAHRTSLDLVRWQRG*GAPGRW
Trigger: CCACCTCCCTGGGGCTCCCAATCCCCTTTGCCATCT...GACCAGGTCAAGGGACGTTCTGTGGGCAGTAGCCCTGTGTGGCCCTGTTCCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000483868.5
ENST00000489960.5
ENST00000648957.1
CDS-3UTR CAA 90 bp TGGGAACAGGGCCACACAGGGCTACTGCCCACAGAACGTCCCTTGACCTGGTCCACTGGGGACTGCTCCTaGGTTGAGCAGAGGCCCCCT +
Preference number: 5 (lower is better)
Translates to: WEQGHTGLLPTERPLTWSTGDCS*VEQRPP
Trigger: AGGGGGCCTCTGCTCAACCAAGGAGCAGTCCCCAGT...GGACCAGGTCAAGGGACGTTCTGTGGGCAGTAGCCCTGTGTGGCCCTGTTCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355552.8
ENST00000648957.1
CDS-3UTR CAA 90 bp AGCCTGGGCCATGTCACTGAGCAGTATGAGAGCAGGTGGGAAGGGGAGGAGGGTAGCTGCCCTCAGGCATaGATGGCCTTCCAGCGCTCG +
Preference number: 5 (lower is better)
Translates to: SLGHVTEQYESRWEGEEGSCPQA*MAFQRS
Trigger: CGAGCGCTGGAAGGCCATCAATGCCTGAGGGCAGCT...ACCCTCCTCCCCTTCCCACCTGCTCTCATACTGCTCAGTGACATGGCCCAGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000483868.5
ENST00000489960.5
ENST00000648957.1
CDS-3UTR CAA 90 bp TCCAGACTCATGGTGGGAACAGGGCCACACAGGGCTACTGCCCACAGAACGTCCCCCACAGAACGTCCCTaGACCTGGTCCTCCTCCCCT +
Preference number: 5 (lower is better)
Translates to: SRLMVGTGPHRATAHRTSPTERP*TWSSSP
Trigger: AGGGGAGGAGGACCAGGTCAAGGGACGTTCTGTGGG...GGACGTTCTGTGGGCAGTAGCCCTGTGTGGCCCTGTTCCCACCATGAGTCTGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000483868.5
ENST00000489960.5
ENST00000648957.1
CDS-3UTR CAA 90 bp GGCCCTGGAAGGAAAGCCTGGGCCATGTCACTGAGCAGTATGAGAGCAGGTGGGCCCACAGAACGTCCCTaGACCTGGTCCTCCTCCCCT +
Preference number: 5 (lower is better)
Translates to: GPGRKAWAMSLSSMRAGGPTERP*TWSSSP
Trigger: AGGGGAGGAGGACCAGGTCAAGGGACGTTCTGTGGG...CCCACCTGCTCTCATACTGCTCAGTGACATGGCCCAGGCTTTCCTTCCAGGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000483868.5
ENST00000489960.5
ENST00000648957.1
CDS-3UTR CAA 90 bp GGCCACACAGGGCTACTGCCCACAGAACGTCCCTTGACCTGGTCCTCCTCCCCTTCCTTCAGCGGGGTCTaGGGAAGGATGACCACCAGA +
Preference number: 5 (lower is better)
Translates to: GHTGLLPTERPLTWSSSPSFSGV*GRMTTR
Trigger: TCTGGTGGTCATCCTTCCCAAGACCCCGCTGAAGGA...AGGGGAGGAGGACCAGGTCAAGGGACGTTCTGTGGGCAGTAGCCCTGTGTGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355552.8
ENST00000450633.6
ENST00000483868.5
ENST00000489960.5
ENST00000648957.1
CDS-3UTR CAA 90 bp GACTCATGGTGGGAACAGGGCCACACAGGGCTACTGCCCACAGAACGTCCCTTGAGCCCCTGCAGTAGGTaGAGCAGTGCCAGGATGCCC +
Preference number: 5 (lower is better)
Translates to: DSWWEQGHTGLLPTERPLSPCSR*SSARMP
Trigger: GGGCATCCTGGCACTGCTCAACCTACTGCAGGGGCT...CAAGGGACGTTCTGTGGGCAGTAGCCCTGTGTGGCCCTGTTCCCACCATGAGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000489960.5
ENST00000648957.1
CDS-3UTR CAA 90 bp CTCCAGACTCATGGTGGGAACAGGGCCACACAGGGCTACTGCCCACAGAACGTCAGCCCCTGCAGTAGGTaGAGCAGTGCCAGGATGCCC +
Preference number: 5 (lower is better)
Translates to: LQTHGGNRATQGYCPQNVSPCSR*SSARMP
Trigger: GGGCATCCTGGCACTGCTCAACCTACTGCAGGGGCT...GACGTTCTGTGGGCAGTAGCCCTGTGTGGCCCTGTTCCCACCATGAGTCTGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000489960.5
ENST00000648957.1
CDS-3UTR CAA 90 bp TCCAGCTCACTGGCCGTACTGTTGGCCCTGTCCGCTATCAACCCTCCAGGCCCTGGTCGCATGGAGCCCTaGAGGATGAAAGCCACAGGC +
Preference number: 5 (lower is better)
Translates to: SSSLAVLLALSAINPPGPGRMEP*RMKATG
Trigger: GCCTGTGGCTTTCATCCTCAAGGGCTCCATGCGACC...AGGGCCTGGAGGGTTGATAGCGGACAGGGCCAACAGTACGGCCAGTGAGCTGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648957.1
CDS-3UTR CAA 90 bp GGAAGGAAAGCCTGGGCCATGTCACTGAGCAGTATGAGAGCAGGTGGGAAGGGGAGCGCTGTGCTCCCATaGGCCCAAGTCACCTCCTCC +
Preference number: 5 (lower is better)
Translates to: GRKAWAMSLSSMRAGGKGSAVLP*AQVTSS
Trigger: GGAGGAGGTGACTTGGGCCAATGGGAGCACAGCGCT...CCCCTTCCCACCTGCTCTCATACTGCTCAGTGACATGGCCCAGGCTTTCCTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000483868.5
ENST00000489960.5
ENST00000648957.1
CDS-3UTR CAA 90 bp GGAGCCCCAGGGAGGTGGGGCCTCCAGACTCATGGTGGGAACAGGGCCACACAGCTCTGTCTCGTCCACTaGGCATTTGTAGGAGAAGAG +
Preference number: 5 (lower is better)
Translates to: GAPGRWGLQTHGGNRATQLCLVH*AFVGEE
Trigger: CTCTTCTCCTACAAATGCCAAGTGGACGAGACAGAG...CTGTGTGGCCCTGTTCCCACCATGAGTCTGGAGGCCCCACCTCCCTGGGGCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000483868.5
ENST00000489960.5
ENST00000648957.1
CDS-3UTR CAA 90 bp GGAAGGAAAGCCTGGGCCATGTCACTGAGCAGTATGAGAGCAGGTGGGAAGGGGAGCTGCCCTCAGGCATaGATGGCCTTCCAGCGCTCG +
Preference number: 5 (lower is better)
Translates to: GRKAWAMSLSSMRAGGKGSCPQA*MAFQRS
Trigger: CGAGCGCTGGAAGGCCATCAATGCCTGAGGGCAGCT...CCCCTTCCCACCTGCTCTCATACTGCTCAGTGACATGGCCCAGGCTTTCCTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000483868.5
ENST00000489960.5
ENST00000648957.1
CDS-3UTR CAA 90 bp GAAGCATGCAGTTGGCTGTGTCCTGGATGGGCTCCTCCTCTCCAACTCTGGGGAAGCTGCCCTCAGGCATaGATGGCCTTCCAGCGCTCG +
Preference number: 5 (lower is better)
Translates to: EACSWLCPGWAPPLQLWGSCPQA*MAFQRS
Trigger: CGAGCGCTGGAAGGCCATCAATGCCTGAGGGCAGCT...TCCCCAGAGTTGGAGAGGAGGAGCCCATCCAGGACACAGCCAACTGCATGCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355552.8
ENST00000648957.1
CDS-3UTR CAA 90 bp GGAAGGAAAGCCTGGGCCATGTCACTGAGCAGTATGAGAGCAGGTGGGAAGGGGCCCACAGAACGTCCCTaGACCTGGTCCTCCTCCCCT +
Preference number: 5 (lower is better)
Translates to: GRKAWAMSLSSMRAGGKGPTERP*TWSSSP
Trigger: AGGGGAGGAGGACCAGGTCAAGGGACGTTCTGTGGG...CCCCTTCCCACCTGCTCTCATACTGCTCAGTGACATGGCCCAGGCTTTCCTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000483868.5
ENST00000489960.5
ENST00000648957.1
CDS-3UTR CAA 90 bp TGCCCTCAGGCATTGATGGCCTTCCAGCGCTCGCTGTCTGTGCTGTTGATGCTGAGATGGCAAAGGGGATaGGGAGCCCCAGGGAGGTGG +
Preference number: 5 (lower is better)
Translates to: CPQALMAFQRSLSVLLMLRWQRG*GAPGRW
Trigger: CCACCTCCCTGGGGCTCCCAATCCCCTTTGCCATCT...CAGCATCAACAGCACAGACAGCGAGCGCTGGAAGGCCATCAATGCCTGAGGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296210.11
ENST00000393400.6
ENST00000483868.5
CDS-3UTR CAA 90 bp CCACACAGGGCTACTGCCCACAGAACGTCCCTTGACCTGGTCCTCCTCCCCTGGCAGAATGCCGTGAGCTaGCCTTCCCTGATTACCAGG +
Preference number: 5 (lower is better)
Translates to: PHRATAHRTSLDLVLLPWQNAVS*PSLITR
Trigger: CCTGGTAATCAGGGAAGGCAAGCTCACGGCATTCTG...CCAGGGGAGGAGGACCAGGTCAAGGGACGTTCTGTGGGCAGTAGCCCTGTGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355552.8
ENST00000648957.1
CDS TCA 90 bp TGCCAATGTCTTCGTAGAGCAGCAGCAGGCAGCGATGAGGCACACTaGTGTTTGGTGCCAGGGGTGGGGGTAGCGCTGTGCTCCCATTGG +
Preference number: 5 (lower is better)
Translates to: CQCLRRAAAGSDEAH*CLVPGVGVALCSHW
Trigger: CCAATGGGAGCACAGCGCTACCCCCACCCCTGGCACCAAACATCAGTGTGCCTCATCGCTGCCTGCTGCTGCTCTACGAAGACATTGGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000462228.1
ENST00000469111.5
ENST00000483868.5
ENST00000489960.5
ENST00000490290.5
ENST00000490643.5
ENST00000648957.1
CDS TCA 90 bp CCCAGCGCTGGATGCCTACTGACCTGGGAAGAGCAAACCCCAAGGTaGTGTGTCCTGGAGCAAGTCCAGCATGACTGTTGGCTGGGGTCC +
Preference number: 5 (lower is better)
Translates to: PSAGCLLTWEEQTPR*CVLEQVQHDCWLGS
Trigger: GGACCCCAGCCAACAGTCATGCTGGACTTGCTCCAGGACACATCACCTTGGGGTTTGCTCTTCCCAGGTCAGTAGGCATCCAGCGCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648957.1
CDS CCA 90 bp GGGCAGCCAGCTGACCCCATCCACCATCTTGACTGCTCTCTTCAGTaGCCTTTGGGAGGGCTCCTGATAATCCCCAGCCCTGCTAGGATC +
Preference number: 5 (lower is better)
Translates to: GQPADPIHHLDCSLQ*PLGGLLIIPSPARI
Trigger: GATCCTAGCAGGGCTGGGGATTATCAGGAGCCCTCCCAAAGGCCACTGAAGAGAGCAGTCAAGATGGTGGATGGGGTCAGCTGGCTGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000462228.1
ENST00000648957.1
CDS-3UTR CAA 90 bp GATTGGGAGCCCCAGGGAGGTGGGGCCTCCAGACTCATGGTGGGAACAGGGCCATCTTATCAGCAACAGTaGCAGCGTTCGAGGTGCTCA +
Preference number: 5 (lower is better)
Translates to: DWEPQGGGASRLMVGTGPSYQQQ*QRSRCS
Trigger: TGAGCACCTCGAACGCTGCAACTGTTGCTGATAAGA...TGGCCCTGTTCCCACCATGAGTCTGGAGGCCCCACCTCCCTGGGGCTCCCAATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000483868.5
ENST00000489960.5
ENST00000648957.1
CDS-3UTR CAA 90 bp CTCCAGACTCATGGTGGGAACAGGGCCACACAGGGCTACTGCCCACAGAACGTCATGGCCAGCACCCGCTaGATGCTGGACTTACTCTCC +
Preference number: 5 (lower is better)
Translates to: LQTHGGNRATQGYCPQNVMASTR*MLDLLS
Trigger: GGAGAGTAAGTCCAGCATCAAGCGGGTGCTGGCCAT...GACGTTCTGTGGGCAGTAGCCCTGTGTGGCCCTGTTCCCACCATGAGTCTGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000483868.5
ENST00000489960.5
ENST00000648957.1
CDS-3UTR CAA 90 bp CTCCAGACTCATGGTGGGAACAGGGCCACACAGGGCTACTGCCCACAGAACGTCTCGCTGTCTGTGCTGTaGATGCTGCCAGTGTGGCAG +
Preference number: 5 (lower is better)
Translates to: LQTHGGNRATQGYCPQNVSLSVL*MLPVWQ
Trigger: CTGCCACACTGGCAGCATCAACAGCACAGACAGCGA...GACGTTCTGTGGGCAGTAGCCCTGTGTGGCCCTGTTCCCACCATGAGTCTGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000483868.5
ENST00000489960.5
ENST00000648957.1
CDS-3UTR CAA 90 bp TGGCCCCACAGACATGAGCTGTGTTGGAGCTTGTGCCCTCGGCACCCCATTCCCTTCGTCCAGCCCAAATaGCGAAAACGGCCACAGTCC +
Preference number: 5 (lower is better)
Translates to: WPHRHELCWSLCPRHPIPFVQPK*RKRPQS
Trigger: GGACTGTGGCCGTTTTCGCAATTTGGGCTGGACGAA...GGGAATGGGGTGCCGAGGGCACAAGCTCCAACACAGCTCATGTCTGTGGGGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000355552.8
CDS-3UTR CAA 90 bp TCCAGACTCATGGTGGGAACAGGGCCACACAGGGCTACTGCCCACAGAACGTCCTCCTTCAGCGGGGTCTaGGGAAGGATGACCACCAGA +
Preference number: 5 (lower is better)
Translates to: SRLMVGTGPHRATAHRTSSFSGV*GRMTTR
Trigger: TCTGGTGGTCATCCTTCCCAAGACCCCGCTGAAGGA...GGACGTTCTGTGGGCAGTAGCCCTGTGTGGCCCTGTTCCCACCATGAGTCTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355552.8
ENST00000450633.6
ENST00000483868.5
ENST00000489960.5
ENST00000648957.1
CDS-3UTR CAA 90 bp GGCCCTGGAAGGAAAGCCTGGGCCATGTCACTGAGCAGTATGAGAGCAGGTGGGTCCTTCAGCGGGGTCTaGGGAAGGATGACCACCAGA +
Preference number: 5 (lower is better)
Translates to: GPGRKAWAMSLSSMRAGGSFSGV*GRMTTR
Trigger: TCTGGTGGTCATCCTTCCCAAGACCCCGCTGAAGGA...CCCACCTGCTCTCATACTGCTCAGTGACATGGCCCAGGCTTTCCTTCCAGGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355552.8
ENST00000450633.6
ENST00000483868.5
ENST00000489960.5
ENST00000648957.1
CDS-3UTR CAA 90 bp ATCCACCATGGTGGATGCTTTGAGGAGGCCAAAGCACCATGGGGATGGGATGGAGGGACTGCTCCTTGGTaGAGCAGAGGCCCCCTGAGC +
Preference number: 5 (lower is better)
Translates to: IHHGGCFEEAKAPWGWDGGTAPW*SRGPLS
Trigger: GCTCAGGGGGCCTCTGCTCAACCAAGGAGCAGTCCC...TCCATCCCATCCCCATGGTGCTTTGGCCTCCTCAAAGCATCCACCATGGTGGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355552.8
ENST00000648957.1
CDS-3UTR CAA 90 bp AGCCTGGGCCATGTCACTGAGCAGTATGAGAGCAGGTGGGAAGGGGAGGAGGGTCCGGCCTCTGTTGTCTaGTCAGCAAAATGGCCCTGG +
Preference number: 5 (lower is better)
Translates to: SLGHVTEQYESRWEGEEGPASVV*SAKWPW
Trigger: CCAGGGCCATTTTGCTGACAAGACAACAGAGGCCGG...ACCCTCCTCCCCTTCCCACCTGCTCTCATACTGCTCAGTGACATGGCCCAGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648957.1
CDS CCA 90 bp GGATCTTATCAGCAACAGTTGCAGCGTTCGAGGTGCTCACCGTCATaGATACCACGGCCCGGGCAATGCCCACCAGCGCCACCACAAACA +
Preference number: 5 (lower is better)
Translates to: GSYQQQLQRSRCSPS*IPRPGQCPPAPPQT
Trigger: TGTTTGTGGTGGCGCTGGTGGGCATTGCCCGGGCCGTGGTATCCATGACGGTGAGCACCTCGAACGCTGCAACTGTTGCTGATAAGATCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000469111.5
ENST00000483868.5
ENST00000489960.5
ENST00000490290.5
ENST00000490643.5
ENST00000648957.1
CDS CCA 90 bp AGGAGACTTGTCCTCGGCGATGTCCTGAAGCAGCTGCCCCAGCGCTaGATGCCTACTGACCTGGGAAGAGCAAACCCCAAGGTGATGTGT +
Preference number: 5 (lower is better)
Translates to: RRLVLGDVLKQLPQR*MPTDLGRANPKVMC
Trigger: ACACATCACCTTGGGGTTTGCTCTTCCCAGGTCAGTAGGCATCCAGCGCTGGGGCAGCTGCTTCAGGACATCGCCGAGGACAAGTCTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648957.1
CDS-3UTR CAA 90 bp CACTTCAGTCCATCCACCATGGTGGATGCTTTGAGGAGGCCAAAGCACCATGGGAGCGCTGTGCTCCCATaGGCCCAAGTCACCTCCTCC +
Preference number: 5 (lower is better)
Translates to: HFSPSTMVDALRRPKHHGSAVLP*AQVTSS
Trigger: GGAGGAGGTGACTTGGGCCAATGGGAGCACAGCGCT...CCCATGGTGCTTTGGCCTCCTCAAAGCATCCACCATGGTGGATGGACTGAAGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000648957.1
CDS-3UTR CAA 90 bp AGGCCCTGGCAGCTGCCCTCAGGCATTGATGGCCTTCCAGCGCTCGCTGTCTGTTCTTATCAGCAACAGTaGCAGCGTTCGAGGTGCTCA +
Preference number: 5 (lower is better)
Translates to: RPWQLPSGIDGLPALAVCSYQQQ*QRSRCS
Trigger: TGAGCACCTCGAACGCTGCAACTGTTGCTGATAAGA...ACAGACAGCGAGCGCTGGAAGGCCATCAATGCCTGAGGGCAGCTGCCAGGGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296210.11
ENST00000393400.6
ENST00000483868.5
CDS-3UTR CAA 90 bp CCACACAGGGCTACTGCCCACAGAACGTCCCTTGACCTGGTCCTCCTCCCCTGGTCTTATCAGCAACAGTaGCAGCGTTCGAGGTGCTCA +
Preference number: 5 (lower is better)
Translates to: PHRATAHRTSLDLVLLPWSYQQQ*QRSRCS
Trigger: TGAGCACCTCGAACGCTGCAACTGTTGCTGATAAGA...CCAGGGGAGGAGGACCAGGTCAAGGGACGTTCTGTGGGCAGTAGCCCTGTGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000483868.5
ENST00000489960.5
ENST00000648957.1
CDS-3UTR CAA 90 bp GGAAGGAAAGCCTGGGCCATGTCACTGAGCAGTATGAGAGCAGGTGGGAAGGGGATGGCCAGCACCCGCTaGATGCTGGACTTACTCTCC +
Preference number: 5 (lower is better)
Translates to: GRKAWAMSLSSMRAGGKGMASTR*MLDLLS
Trigger: GGAGAGTAAGTCCAGCATCAAGCGGGTGCTGGCCAT...CCCCTTCCCACCTGCTCTCATACTGCTCAGTGACATGGCCCAGGCTTTCCTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000483868.5
ENST00000489960.5
ENST00000648957.1
CDS-3UTR CAA 90 bp GCCGAAGAAGCCCCGGAGGAAAGCCACGTAGATGAGCGGAGCGAAGAAGCTGAAATGGCCAGCACCCGCTaGATGCTGGACTTACTCTCC +
Preference number: 5 (lower is better)
Translates to: AEEAPEESHVDERSEEAEMASTR*MLDLLS
Trigger: GGAGAGTAAGTCCAGCATCAAGCGGGTGCTGGCCAT...TTCAGCTTCTTCGCTCCGCTCATCTACGTGGCTTTCCTCCGGGGCTTCTTCGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393400.6
ENST00000483868.5
CDS-3UTR CAA 90 bp GGAAGGAAAGCCTGGGCCATGTCACTGAGCAGTATGAGAGCAGGTGGGAAGGGGTCCTTCAGCGGGGTCTaGGGAAGGATGACCACCAGA +
Preference number: 5 (lower is better)
Translates to: GRKAWAMSLSSMRAGGKGSFSGV*GRMTTR
Trigger: TCTGGTGGTCATCCTTCCCAAGACCCCGCTGAAGGA...CCCCTTCCCACCTGCTCTCATACTGCTCAGTGACATGGCCCAGGCTTTCCTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355552.8
ENST00000450633.6
ENST00000483868.5
ENST00000489960.5
ENST00000648957.1
CDS-3UTR CAA 90 bp CATTGGCCCCACAGACATGAGCTGTGTTGGAGCTTGTGCCCTCGGCACCCCATTTCACTGGCCGTACTGTaGGCCCTGTCCGCTATCAAC +
Preference number: 5 (lower is better)
Translates to: HWPHRHELCWSLCPRHPISLAVL*ALSAIN
Trigger: GTTGATAGCGGACAGGGCCAACAGTACGGCCAGTGA...AATGGGGTGCCGAGGGCACAAGCTCCAACACAGCTCATGTCTGTGGGGCCAATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355552.8
ENST00000648957.1
CDS-3UTR CAA 90 bp AGCCTGGGCCATGTCACTGAGCAGTATGAGAGCAGGTGGGAAGGGGAGGAGGGTCAGAATGCCGTGAGCTaGCCTTCCCTGATTACCAGG +
Preference number: 5 (lower is better)
Translates to: SLGHVTEQYESRWEGEEGQNAVS*PSLITR
Trigger: CCTGGTAATCAGGGAAGGCAAGCTCACGGCATTCTG...ACCCTCCTCCCCTTCCCACCTGCTCTCATACTGCTCAGTGACATGGCCCAGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355552.8
ENST00000648957.1
CDS-3UTR CAA 90 bp CCTTACCCCGCTCACTCAGAATGCCGTGAGCTTGCCTTCCCTGATTACCAGGCTCGCGCCCGGCCTCTGTaGTCTTGTCAGCAAAATGGC +
Preference number: 5 (lower is better)
Translates to: PYPAHSECRELAFPDYQARARPL*SCQQNG
Trigger: GCCATTTTGCTGACAAGACAACAGAGGCCGGGCGCG...AGCCTGGTAATCAGGGAAGGCAAGCTCACGGCATTCTGAGTGAGCGGGGTAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648957.1
CDS CCA 90 bp AGCGGTCGCATGGAGCCCTTGAGGATGAAAGCCACAGGCTACAGATaGTGGAACCAGAATGGGGAGGAGACTTGTCCTCGGCGATGTCCT +
Preference number: 5 (lower is better)
Translates to: SGRMEPLRMKATGYR*WNQNGEETCPRRCP
Trigger: AGGACATCGCCGAGGACAAGTCTCCTCCCCATTCTGGTTCCACCATCTGTAGCCTGTGGCTTTCATCCTCAAGGGCTCCATGCGACCGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000462228.1
ENST00000490643.5
ENST00000648957.1
CDS-3UTR CAA 90 bp CCCTGGAAGGAAAGCCTGGGCCATGTCACTGAGCAGTATGAGAGCAGGTGGGAAATGGCCAGCACCCGCTaGATGCTGGACTTACTCTCC +
Preference number: 5 (lower is better)
Translates to: PWKESLGHVTEQYESRWEMASTR*MLDLLS
Trigger: GGAGAGTAAGTCCAGCATCAAGCGGGTGCTGGCCAT...TTCCCACCTGCTCTCATACTGCTCAGTGACATGGCCCAGGCTTTCCTTCCAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000483868.5
ENST00000489960.5
ENST00000648957.1
CDS-3UTR CAA 90 bp CCAGCGCTCGCTGTCTGTGCTGTTGATGCTGCCAGTGTGGCAGGGCATGGAAGCCTCTGTCTCGTCCACTaGGCATTTGTAGGAGAAGAG +
Preference number: 5 (lower is better)
Translates to: PALAVCAVDAASVAGHGSLCLVH*AFVGEE
Trigger: CTCTTCTCCTACAAATGCCAAGTGGACGAGACAGAG...GCTTCCATGCCCTGCCACACTGGCAGCATCAACAGCACAGACAGCGAGCGCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296210.11
ENST00000393400.6
ENST00000483868.5
CDS-3UTR CAA 90 bp TGGCCCCACAGACATGAGCTGTGTTGGAGCTTGTGCCCTCGGCACCCCATTCCCCTCTGTCTCGTCCACTaGGCATTTGTAGGAGAAGAG +
Preference number: 5 (lower is better)
Translates to: WPHRHELCWSLCPRHPIPLCLVH*AFVGEE
Trigger: CTCTTCTCCTACAAATGCCAAGTGGACGAGACAGAG...GGGAATGGGGTGCCGAGGGCACAAGCTCCAACACAGCTCATGTCTGTGGGGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355552.8
ENST00000648957.1
CDS-3UTR CAA 90 bp CCCTGGAAGGAAAGCCTGGGCCATGTCACTGAGCAGTATGAGAGCAGGTGGGAATCGCTGTCTGTGCTGTaGATGCTGCCAGTGTGGCAG +
Preference number: 5 (lower is better)
Translates to: PWKESLGHVTEQYESRWESLSVL*MLPVWQ
Trigger: CTGCCACACTGGCAGCATCAACAGCACAGACAGCGA...TTCCCACCTGCTCTCATACTGCTCAGTGACATGGCCCAGGCTTTCCTTCCAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000483868.5
ENST00000489960.5
ENST00000648957.1
CDS-3UTR CAA 90 bp CCTTACCCCGCTCACTCAGAATGCCGTGAGCTTGCCTTCCCTGATTACCAGGCTTCGCTGTCTGTGCTGTaGATGCTGCCAGTGTGGCAG +
Preference number: 5 (lower is better)
Translates to: PYPAHSECRELAFPDYQASLSVL*MLPVWQ
Trigger: CTGCCACACTGGCAGCATCAACAGCACAGACAGCGA...AGCCTGGTAATCAGGGAAGGCAAGCTCACGGCATTCTGAGTGAGCGGGGTAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355552.8
ENST00000648957.1
CDS-3UTR CAA 90 bp GGAAGGAAAGCCTGGGCCATGTCACTGAGCAGTATGAGAGCAGGTGGGAAGGGGTTCGTCCAGCCCAAATaGCGAAAACGGCCACAGTCC +
Preference number: 5 (lower is better)
Translates to: GRKAWAMSLSSMRAGGKGFVQPK*RKRPQS
Trigger: GGACTGTGGCCGTTTTCGCAATTTGGGCTGGACGAA...CCCCTTCCCACCTGCTCTCATACTGCTCAGTGACATGGCCCAGGCTTTCCTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355552.8
ENST00000393400.6
CDS-3UTR CAA 90 bp GCTCACTGGCCGTACTGTTGGCCCTGTCCGCTATCAACCCTCCAGGCCCTCCCAGAAGCAGTCCTCCACTaGACATGGAATGATCTCCAA +
Preference number: 5 (lower is better)
Translates to: AHWPYCWPCPLSTLQALPEAVLH*TWNDLQ
Trigger: TTGGAGATCATTCCATGTCAAGTGGAGGACTGCTTC...TGGGAGGGCCTGGAGGGTTGATAGCGGACAGGGCCAACAGTACGGCCAGTGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355552.8
ENST00000648957.1
CDS GCA 90 bp GCCCTCTTAAAGAGACAGCACAGAGGAGGTGCAGAGACAAGACGCTaGTTCACGGAAGAGAGAGGCCTGCGTTTCTCACTCGGAAAGCGG +
Preference number: 5 (lower is better)
Translates to: ALLKRQHRGGAETRR*FTEERGLRFSLGKR
Trigger: CCGCTTTCCGAGTGAGAAACGCAGGCCTCTCTCTTCCGTGAAGCAGCGTCTTGTCTCTGCACCTCCTCTGTGCTGTCTCTTTAAGAGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490290.5
CDS GCA 90 bp GGGCTCTTAAAGAGACAGCACAGAGGAGGTGCAGAGACAAGACGCTaGTTCACGGAAGAGAGAGGCCTGCGTTTCTCACTCGGAAAGCGG +
Preference number: 5 (lower is better)
Translates to: GLLKRQHRGGAETRR*FTEERGLRFSLGKR
Trigger: CCGCTTTCCGAGTGAGAAACGCAGGCCTCTCTCTTCCGTGAAGCAGCGTCTTGTCTCTGCACCTCCTCTGTGCTGTCTCTTTAAGAGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489960.5
CDS-3UTR CAA 90 bp CTCTGTCTCGTCCACTTGGCATTTGTAGGAGAAGAGGATCTTGGGCTCCGAGCCATGGCCAGCACCCGCTaGATGCTGGACTTACTCTCC +
Preference number: 5 (lower is better)
Translates to: LCLVHLAFVGEEDLGLRAMASTR*MLDLLS
Trigger: GGAGAGTAAGTCCAGCATCAAGCGGGTGCTGGCCAT...GGCTCGGAGCCCAAGATCCTCTTCTCCTACAAATGCCAAGTGGACGAGACAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393400.6
ENST00000483868.5
CDS-3UTR CAA 90 bp CTCTGTCTCGTCCACTTGGCATTTGTAGGAGAAGAGGATCTTGGGCTCCGAGCCTCGCTGTCTGTGCTGTaGATGCTGCCAGTGTGGCAG +
Preference number: 5 (lower is better)
Translates to: LCLVHLAFVGEEDLGLRASLSVL*MLPVWQ
Trigger: CTGCCACACTGGCAGCATCAACAGCACAGACAGCGA...GGCTCGGAGCCCAAGATCCTCTTCTCCTACAAATGCCAAGTGGACGAGACAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393400.6
ENST00000483868.5
CDS-3UTR CAA 90 bp CAGCAAACTTCGGCTGACACTGTGCCATCTTGGACTGCATGTGGATCTGATGGTACTGGGGACTGCTCCTaGGTTGAGCAGAGGCCCCCT +
Preference number: 5 (lower is better)
Translates to: QQTSADTVPSWTACGSDGTGDCS*VEQRPP
Trigger: AGGGGGCCTCTGCTCAACCAAGGAGCAGTCCCCAGT...ACCATCAGATCCACATGCAGTCCAAGATGGCACAGTGTCAGCCGAAGTTTGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355552.8
ENST00000648957.1
CDS-3UTR CAA 90 bp CTGGATGGGCTCCTCCTCTCCAACTCTGGGGATTACATAACTGGCAGCAACTCCTCACTGGCCGTACTGTaGGCCCTGTCCGCTATCAAC +
Preference number: 5 (lower is better)
Translates to: LDGLLLSNSGDYITGSNSSLAVL*ALSAIN
Trigger: GTTGATAGCGGACAGGGCCAACAGTACGGCCAGTGA...GGAGTTGCTGCCAGTTATGTAATCCCCAGAGTTGGAGAGGAGGAGCCCATCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355552.8
ENST00000648957.1
CDS-3UTR CAA 90 bp GAAGCATGCAGTTGGCTGTGTCCTGGATGGGCTCCTCCTCTCCAACTCTGGGGATCTTATCAGCAACAGTaGCAGCGTTCGAGGTGCTCA +
Preference number: 5 (lower is better)
Translates to: EACSWLCPGWAPPLQLWGSYQQQ*QRSRCS
Trigger: TGAGCACCTCGAACGCTGCAACTGTTGCTGATAAGA...TCCCCAGAGTTGGAGAGGAGGAGCCCATCCAGGACACAGCCAACTGCATGCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355552.8
ENST00000648957.1
CDS CCA 90 bp TCACTCCCCAAGCCTGTCCCAGGCTGCCTGAGTGTCCTCAAGACATaGATGCTGCCTTCTCTCAGAGTGAGCAAAGCTGCAGTCTTTTTG +
Preference number: 5 (lower is better)
Translates to: SLPKPVPGCLSVLKT*MLPSLRVSKAAVFL
Trigger: CAAAAAGACTGCAGCTTTGCTCACTCTGAGAGAAGGCAGCATCCATGTCTTGAGGACACTCAGGCAGCCTGGGACAGGCTTGGGGAGTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000648957.1
CDS-3UTR CAA 90 bp CCCTGGAAGGAAAGCCTGGGCCATGTCACTGAGCAGTATGAGAGCAGGTGGGAATCTTATCAGCAACAGTaGCAGCGTTCGAGGTGCTCA +
Preference number: 5 (lower is better)
Translates to: PWKESLGHVTEQYESRWESYQQQ*QRSRCS
Trigger: TGAGCACCTCGAACGCTGCAACTGTTGCTGATAAGA...TTCCCACCTGCTCTCATACTGCTCAGTGACATGGCCCAGGCTTTCCTTCCAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000483868.5
ENST00000489960.5
ENST00000648957.1
CDS-3UTR CAA 90 bp ACACTTCAGTCCATCCACCATGGTGGATGCTTTGAGGAGGCCAAAGCACCATGGACCCCATCCACCATCTaGACTGCTCTCTTCAGTGGC +
Preference number: 5 (lower is better)
Translates to: TLQSIHHGGCFEEAKAPWTPSTI*TALFSG
Trigger: GCCACTGAAGAGAGCAGTCAAGATGGTGGATGGGGT...CCATGGTGCTTTGGCCTCCTCAAAGCATCCACCATGGTGGATGGACTGAAGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648957.1
CDS-3UTR CAA 90 bp AAATATACACACTTCAGTCCATCCACCATGGTGGATGCTTTGAGGAGGCCAAAGAGCGCTGTGCTCCCATaGGCCCAAGTCACCTCCTCC +
Preference number: 5 (lower is better)
Translates to: KYTHFSPSTMVDALRRPKSAVLP*AQVTSS
Trigger: GGAGGAGGTGACTTGGGCCAATGGGAGCACAGCGCT...CTTTGGCCTCCTCAAAGCATCCACCATGGTGGATGGACTGAAGTGTGTATATTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000648957.1
CDS-3UTR CAA 90 bp CTCTGTCTCGTCCACTTGGCATTTGTAGGAGAAGAGGATCTTGGGCTCCGAGCCCTCTGTCTCGTCCACTaGGCATTTGTAGGAGAAGAG +
Preference number: 5 (lower is better)
Translates to: LCLVHLAFVGEEDLGLRALCLVH*AFVGEE
Trigger: CTCTTCTCCTACAAATGCCAAGTGGACGAGACAGAG...GGCTCGGAGCCCAAGATCCTCTTCTCCTACAAATGCCAAGTGGACGAGACAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393400.6
ENST00000483868.5
CDS-3UTR CAA 90 bp AAATATACACACTTCAGTCCATCCACCATGGTGGATGCTTTGAGGAGGCCAAAGCCCACAGAACGTCCCTaGACCTGGTCCTCCTCCCCT +
Preference number: 5 (lower is better)
Translates to: KYTHFSPSTMVDALRRPKPTERP*TWSSSP
Trigger: AGGGGAGGAGGACCAGGTCAAGGGACGTTCTGTGGG...CTTTGGCCTCCTCAAAGCATCCACCATGGTGGATGGACTGAAGTGTGTATATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000648957.1
CDS-3UTR CAA 90 bp AAAATATACACACTTCAGTCCATCCACCATGGTGGATGCTTTGAGGAGGCCAAAAGCTGCCCTCAGGCATaGATGGCCTTCCAGCGCTCG +
Preference number: 5 (lower is better)
Translates to: KIYTLQSIHHGGCFEEAKSCPQA*MAFQRS
Trigger: CGAGCGCTGGAAGGCCATCAATGCCTGAGGGCAGCT...TTTGGCCTCCTCAAAGCATCCACCATGGTGGATGGACTGAAGTGTGTATATTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000648957.1
CDS-3UTR CAA 90 bp TGTGAACACAGGATGGCTCTGGAAGGTTATGGAGACCCTGGGTGCTTCAGGAGGGAAGCAGTCCTCCACTaGACATGGAATGATCTCCAA +
Preference number: 5 (lower is better)
Translates to: CEHRMALEGYGDPGCFRREAVLH*TWNDLQ
Trigger: TTGGAGATCATTCCATGTCAAGTGGAGGACTGCTTC...CCTCCTGAAGCACCCAGGGTCTCCATAACCTTCCAGAGCCATCCTGTGTTCACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355552.8
ENST00000648957.1
CDS-3UTR CAA 90 bp GGTGTACATCTGGCTCCTCTGTCTCGTCCACTTGGCATTTGTAGGAGAAGAGGATCTTATCAGCAACAGTaGCAGCGTTCGAGGTGCTCA +
Preference number: 5 (lower is better)
Translates to: GVHLAPLSRPLGICRRRGSYQQQ*QRSRCS
Trigger: TGAGCACCTCGAACGCTGCAACTGTTGCTGATAAGA...TCCTCTTCTCCTACAAATGCCAAGTGGACGAGACAGAGGAGCCAGATGTACACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393400.6
ENST00000483868.5
CDS-3UTR CAA 90 bp ATCTGGCTCCTCTGTCTCGTCCACTTGGCATTTGTAGGAGAAGAGGATCTTGGGTCTTATCAGCAACAGTaGCAGCGTTCGAGGTGCTCA +
Preference number: 5 (lower is better)
Translates to: IWLLCLVHLAFVGEEDLGSYQQQ*QRSRCS
Trigger: TGAGCACCTCGAACGCTGCAACTGTTGCTGATAAGA...CCCAAGATCCTCTTCTCCTACAAATGCCAAGTGGACGAGACAGAGGAGCCAGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393400.6
ENST00000483868.5
CDS-3UTR CAA 90 bp GTGCTTTGCTCTGATTTACTCCCATTTTCAGCCAACCACACCCATCCTTATGACATGGCCAGCACCCGCTaGATGCTGGACTTACTCTCC +
Preference number: 5 (lower is better)
Translates to: VLCSDLLPFSANHTHPYDMASTR*MLDLLS
Trigger: GGAGAGTAAGTCCAGCATCAAGCGGGTGCTGGCCAT...GTCATAAGGATGGGTGTGGTTGGCTGAAAATGGGAGTAAATCAGAGCAAAGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355552.8
ENST00000648957.1
CDS-3UTR CAA 90 bp ATCAAGAAAATATACACACTTCAGTCCATCCACCATGGTGGATGCTTTGAGGAGAGCTGCCCTCAGGCATaGATGGCCTTCCAGCGCTCG +
Preference number: 5 (lower is better)
Translates to: IKKIYTLQSIHHGGCFEESCPQA*MAFQRS
Trigger: CGAGCGCTGGAAGGCCATCAATGCCTGAGGGCAGCT...CTCCTCAAAGCATCCACCATGGTGGATGGACTGAAGTGTGTATATTTTCTTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000648957.1
CDS-3UTR CAA 90 bp ATCAAGAAAATATACACACTTCAGTCCATCCACCATGGTGGATGCTTTGAGGAGAGCCCCTGCAGTAGGTaGAGCAGTGCCAGGATGCCC +
Preference number: 5 (lower is better)
Translates to: IKKIYTLQSIHHGGCFEESPCSR*SSARMP
Trigger: GGGCATCCTGGCACTGCTCAACCTACTGCAGGGGCT...CTCCTCAAAGCATCCACCATGGTGGATGGACTGAAGTGTGTATATTTTCTTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000648957.1
CDS-3UTR CAA 90 bp CAGGGACAAGTGGGCCCCTCTCCCCTACTCATGCCTTATGATCCCAGTGCTTTGCTCCAGCAATTCTACTaGCATGAGTTACCAAAAGCA +
Preference number: 5 (lower is better)
Translates to: QGQVGPSPLLMPYDPSALLQQFY*HELPKA
Trigger: TGCTTTTGGTAACTCATGCAAGTAGAATTGCTGGAG...CAAAGCACTGGGATCATAAGGCATGAGTAGGGGAGAGGGGCCCACTTGTCCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355552.8
ENST00000648957.1
CDS-3UTR CAA 90 bp ATCAAGAAAATATACACACTTCAGTCCATCCACCATGGTGGATGCTTTGAGGAGATGGCCAGCACCCGCTaGATGCTGGACTTACTCTCC +
Preference number: 5 (lower is better)
Translates to: IKKIYTLQSIHHGGCFEEMASTR*MLDLLS
Trigger: GGAGAGTAAGTCCAGCATCAAGCGGGTGCTGGCCAT...CTCCTCAAAGCATCCACCATGGTGGATGGACTGAAGTGTGTATATTTTCTTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000648957.1
CDS-3UTR CAA 90 bp ATCAAGAAAATATACACACTTCAGTCCATCCACCATGGTGGATGCTTTGAGGAGTCGCTGTCTGTGCTGTaGATGCTGCCAGTGTGGCAG +
Preference number: 5 (lower is better)
Translates to: IKKIYTLQSIHHGGCFEESLSVL*MLPVWQ
Trigger: CTGCCACACTGGCAGCATCAACAGCACAGACAGCGA...CTCCTCAAAGCATCCACCATGGTGGATGGACTGAAGTGTGTATATTTTCTTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000648957.1
CDS-3UTR CAA 90 bp ACACTTCAGTCCATCCACCATGGTGGATGCTTTGAGGAGGCCAAAGCACCATGGCTCCAGCAATTCTACTaGCATGAGTTACCAAAAGCA +
Preference number: 5 (lower is better)
Translates to: TLQSIHHGGCFEEAKAPWLQQFY*HELPKA
Trigger: TGCTTTTGGTAACTCATGCAAGTAGAATTGCTGGAG...CCATGGTGCTTTGGCCTCCTCAAAGCATCCACCATGGTGGATGGACTGAAGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355552.8
ENST00000648957.1
CDS-3UTR CAA 90 bp AAAATATACACACTTCAGTCCATCCACCATGGTGGATGCTTTGAGGAGGCCAAACTCTGTCTCGTCCACTaGGCATTTGTAGGAGAAGAG +
Preference number: 5 (lower is better)
Translates to: KIYTLQSIHHGGCFEEAKLCLVH*AFVGEE
Trigger: CTCTTCTCCTACAAATGCCAAGTGGACGAGACAGAG...TTTGGCCTCCTCAAAGCATCCACCATGGTGGATGGACTGAAGTGTGTATATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000648957.1
CDS-3UTR CAA 90 bp CTATTCTTGAGGCTAAAAATAAGAGCTATCCTTATCGTTCATTACTGTACGCCATCTCTTCAGTGGCCTTaGGGAGGGCTCCTGATAATC +
Preference number: 5 (lower is better)
Translates to: LFLRLKIRAILIVHYCTPSLQWP*GGLLII
Trigger: GATTATCAGGAGCCCTCCCAAAGGCCACTGAAGAGA...TGGCGTACAGTAATGAACGATAAGGATAGCTCTTATTTTTAGCCTCAAGAATAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648957.1
CDS CCA 72 bp GCGGGACTCCGGCCTCCAGCGCCAGACCAGGCGGCCTaGGCCGGGAAGCGTCGCGCAAGGACCGGGCGCGAC +
Preference number: 6 (lower is better)
Translates to: AGLRPPAPDQAA*AGKRRARTGRD
Trigger: GTCGCGCCCGGTCCTTGCGCGACGCTTCCCGGCCCAGGCCGCCTGGTCTGGCGCTGGAGGCCGGAGTCCCGC
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000469111.5
ENST00000483868.5
ENST00000489960.5
CDS GCA 72 bp GGTCAGCTCGCCGGGCCGCGGGTCTCGCGGACACCCTaGAGCCCTTCCCGACAGCGGCGACCGGGAAAGCAA +
Preference number: 6 (lower is better)
Translates to: GQLAGPRVSRTP*SPSRQRRPGKQ
Trigger: TTGCTTTCCCGGTCGCCGCTGTCGGGAAGGGCTGCAGGGTGTCCGCGAGACCCGCGGCCCGGCGAGCTGACC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000469111.5
ENST00000483868.5
CDS CAA 90 bp AGGACGCGCCACCTCTCGCCCTACGCGCCTTCCAGCTGGCAGCAGTaGTCAGTGGACCAGCTGGCGGCAGCCGCGCTCCACCTCCCGGCC +
Preference number: 6 (lower is better)
Translates to: RTRHLSPYAPSSWQQ*SVDQLAAAALHLPA
Trigger: GGCCGGGAGGTGGAGCGCGGCTGCCGCCAGCTGGTCCACTGACAACTGCTGCCAGCTGGAAGGCGCGTAGGGCGAGAGGTGGCGCGTCCT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000489960.5
ENST00000490290.5
CDS CCA 72 bp CGCCCTACGCGCCTTCCAGCTGGCAGCAGTTGTCAGTaGACCAGCTGGCGGCAGCCGCGCTCCACCTCCCGG +
Preference number: 6 (lower is better)
Translates to: RPTRLPAGSSCQ*TSWRQPRSTSR
Trigger: CCGGGAGGTGGAGCGCGGCTGCCGCCAGCTGGTCCACTGACAACTGCTGCCAGCTGGAAGGCGCGTAGGGCG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000489960.5
ENST00000490290.5
CDS TCA 72 bp GTCGCGCAAGGACCGGGCGCGACCGGCTCCGTGGAATaGGGGCTAGGCAGGAAAGGCGAGGCGGGGTCAGCT +
Preference number: 6 (lower is better)
Translates to: VAQGPGATGSVE*GLGRKGEAGSA
Trigger: AGCTGACCCCGCCTCGCCTTTCCTGCCTAGCCCTCATTCCACGGAGCCGGTCGCGCCCGGTCCTTGCGCGAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000469111.5
ENST00000483868.5
CDS CCA 72 bp AGGACGCGCCACCTCTCGCCCTACGCGCCTTCCAGCTaGCAGCAGTTGTCAGTGGACCAGCTGGCGGCAGCC +
Preference number: 6 (lower is better)
Translates to: RTRHLSPYAPSS*QQLSVDQLAAA
Trigger: GGCTGCCGCCAGCTGGTCCACTGACAACTGCTGCCAGCTGGAAGGCGCGTAGGGCGAGAGGTGGCGCGTCCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000489960.5
ENST00000490290.5
CDS CCA 72 bp GTCCTCGGCGATGTCCTGAAGCAGCTGCCCCAGCGCTaGATGCCTACTGACCTCCGCTCCAGCTCCCACCAC +
Preference number: 6 (lower is better)
Translates to: VLGDVLKQLPQR*MPTDLRSSSHH
Trigger: GTGGTGGGAGCTGGAGCGGAGGTCAGTAGGCATCCAGCGCTGGGGCAGCTGCTTCAGGACATCGCCGAGGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490643.5
CDS CAA 72 bp TTTGGTGCCAGGGGTGGGGGTAGCGCTGTGCTCCCATaGGCCCAAGTCACCTCCTCCAGGGTGTCCATCCCG +
Preference number: 6 (lower is better)
Translates to: FGARGGGSAVLP*AQVTSSRVSIP
Trigger: CGGGATGGACACCCTGGAGGAGGTGACTTGGGCCAATGGGAGCACAGCGCTACCCCCACCCCTGGCACCAAA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000462228.1
ENST00000469111.5
ENST00000483868.5
ENST00000489960.5
ENST00000490290.5
ENST00000490643.5
ENST00000648957.1
CDS TCA 72 bp CACTCGGAAAGCGGGCGGAATCGAAGACTGGAAAGCTaGGGACGCGCCACCTCTCGCCCTACGCGCCTTCCA +
Preference number: 6 (lower is better)
Translates to: HSESGRNRRLES*GRATSRPTRLP
Trigger: TGGAAGGCGCGTAGGGCGAGAGGTGGCGCGTCCTCAGCTTTCCAGTCTTCGATTCCGCCCGCTTTCCGAGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000489960.5
ENST00000490290.5
CDS GCA 72 bp TGGGTCGTGAGGTCCCACCCTGGACAGGCCAGGCTCTaGCTCCAGCACCTACTACCCTCAAGCCTGGTGTGT +
Preference number: 6 (lower is better)
Translates to: WVVRSHPGQARL*LQHLLPSSLVC
Trigger: ACACACCAGGCTTGAGGGTAGTAGGTGCTGGAGGCAGAGCCTGGCCTGTCCAGGGTGGGACCTCACGACCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465915.1
CDS CCA 72 bp CAGCAACAGTTGCAGCGTTCGAGGTGCTCACCGTCATaGATACCACGGCCCGGGCAATGCCCACCAGCGCCA +
Preference number: 6 (lower is better)
Translates to: QQQLQRSRCSPS*IPRPGQCPPAP
Trigger: TGGCGCTGGTGGGCATTGCCCGGGCCGTGGTATCCATGACGGTGAGCACCTCGAACGCTGCAACTGTTGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000469111.5
ENST00000483868.5
ENST00000489960.5
ENST00000490290.5
ENST00000490643.5
ENST00000648957.1
CDS TCA 72 bp CTTCGTAGAGCAGCAGCAGGCAGCGATGAGGCACACTaGTGTTTGGTGCCAGGGGTGGGGGTAGCGCTGTGC +
Preference number: 6 (lower is better)
Translates to: LRRAAAGSDEAH*CLVPGVGVALC
Trigger: GCACAGCGCTACCCCCACCCCTGGCACCAAACATCAGTGTGCCTCATCGCTGCCTGCTGCTGCTCTACGAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000462228.1
ENST00000469111.5
ENST00000483868.5
ENST00000489960.5
ENST00000490290.5
ENST00000490643.5
ENST00000648957.1
CDS CCA 72 bp TACACAGCCTCTCAGCTTCAATCCTCACACCCATGCTaGAAGAAGGCGCAGTTCCGCCGGCAGCCACGCGGG +
Preference number: 6 (lower is better)
Translates to: YTASQLQSSHPC*KKAQFRRQPRG
Trigger: CCCGCGTGGCTGCCGGCGGAACTGCGCCTTCTTCCAGCATGGGTGTGAGGATTGAAGCTGAGAGGCTGTGTA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465915.1
CDS CCA 72 bp GCGTTTCTCACTCGGAAAGCGGGCGGAATCGAAGACTaGAAAGCTGAGGACGCGCCACCTCTCGCCCTACGC +
Preference number: 6 (lower is better)
Translates to: AFLTRKAGGIED*KAEDAPPLALR
Trigger: GCGTAGGGCGAGAGGTGGCGCGTCCTCAGCTTTCCAGTCTTCGATTCCGCCCGCTTTCCGAGTGAGAAACGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000489960.5
ENST00000490290.5
CDS CCA 72 bp GTCCTCGGCGATGTCCTGAAGCAGCTGCCCCAGCGCTaGATGCCTACTGACCTGGGAAGAGCAAACCCCAAG +
Preference number: 6 (lower is better)
Translates to: VLGDVLKQLPQR*MPTDLGRANPK
Trigger: CTTGGGGTTTGCTCTTCCCAGGTCAGTAGGCATCCAGCGCTGGGGCAGCTGCTTCAGGACATCGCCGAGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648957.1
CDS CAA 72 bp GCCAGGGACAGCACTGTGGTGATGGCCAGCACCCGCTaGATGCTGGACTTACTCTCCAGGTGGCCAAAGGCC +
Preference number: 6 (lower is better)
Translates to: ARDSTVVMASTR*MLDLLSRWPKA
Trigger: GGCCTTTGGCCACCTGGAGAGTAAGTCCAGCATCAAGCGGGTGCTGGCCATCACCACAGTGCTGTCCCTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000469111.5
ENST00000483868.5
ENST00000489960.5
ENST00000490290.5
ENST00000490643.5
ENST00000648957.1
CDS GCA 72 bp ATGATGTCGAAGCACAGCAGCACACTCCCCAGCCCCTaGAGTAGGTTGAGCAGTGCCAGGATGCCCGCATAC +
Preference number: 6 (lower is better)
Translates to: MMSKHSSTLPSP*SRLSSARMPAY
Trigger: GTATGCGGGCATCCTGGCACTGCTCAACCTACTGCAGGGGCTGGGGAGTGTGCTGCTGTGCTTCGACATCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000465915.1
ENST00000489960.5
ENST00000648957.1
CDS CAA 90 bp CCAGCTGACCCCATCCACCATCTTGACTGCTCTCTTCAGTGGCCTTaGGGAGGGCTCCTGATAATCCCCAGCCCTGCTAGGATCTCCTCT +
Preference number: 6 (lower is better)
Translates to: PADPIHHLDCSLQWP*GGLLIIPSPARISS
Trigger: AGAGGAGATCCTAGCAGGGCTGGGGATTATCAGGAGCCCTCCCAAAGGCCACTGAAGAGAGCAGTCAAGATGGTGGATGGGGTCAGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000462228.1
ENST00000648957.1
CDS GCA 72 bp TCTGGGCAGCCAGCTGACCCCATCCACCATCTTGACTaGTCTCTTCAGTGGCCTTTGGGAGGGCTCCTGATA +
Preference number: 6 (lower is better)
Translates to: SGQPADPIHHLD*SLQWPLGGLLI
Trigger: TATCAGGAGCCCTCCCAAAGGCCACTGAAGAGAGCAGTCAAGATGGTGGATGGGGTCAGCTGGCTGCCCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462228.1
ENST00000648957.1
CDS CCA 72 bp GCTGACCCCATCCACCATCTTGACTGCTCTCTTCAGTaGCCTTTGGGAGGGCTCCTGATAATCCCCAGCCCT +
Preference number: 6 (lower is better)
Translates to: ADPIHHLDCSLQ*PLGGLLIIPSP
Trigger: AGGGCTGGGGATTATCAGGAGCCCTCCCAAAGGCCACTGAAGAGAGCAGTCAAGATGGTGGATGGGGTCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000462228.1
ENST00000648957.1
CDS CAA 72 bp CCCATCCACCATCTTGACTGCTCTCTTCAGTGGCCTTaGGGAGGGCTCCTGATAATCCCCAGCCCTGCTAGG +
Preference number: 6 (lower is better)
Translates to: PIHHLDCSLQWP*GGLLIIPSPAR
Trigger: CCTAGCAGGGCTGGGGATTATCAGGAGCCCTCCCAAAGGCCACTGAAGAGAGCAGTCAAGATGGTGGATGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462228.1
ENST00000648957.1
CDS GCA 72 bp ACAGGATCTTATCAGCAACAGTTGCAGCGTTCGAGGTaGTCACCGTCATGGATACCACGGCCCGGGCAATGC +
Preference number: 6 (lower is better)
Translates to: TGSYQQQLQRSR*SPSWIPRPGQC
Trigger: GCATTGCCCGGGCCGTGGTATCCATGACGGTGAGCACCTCGAACGCTGCAACTGTTGCTGATAAGATCCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000469111.5
ENST00000483868.5
ENST00000489960.5
ENST00000490290.5
ENST00000490643.5
ENST00000648957.1
CDS CCA 72 bp GTCCTCGGCGATGTCCTGAAGCAGCTGCCCCAGCGCTaGATGCCTACTGACCTGTCAACACACTTCAATGTA +
Preference number: 6 (lower is better)
Translates to: VLGDVLKQLPQR*MPTDLSTHFNV
Trigger: TACATTGAAGTGTGTTGACAGGTCAGTAGGCATCCAGCGCTGGGGCAGCTGCTTCAGGACATCGCCGAGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462228.1
CDS TCA 72 bp GCGGCCCCCATGGCCATAGATATTAAAGTCCTCAGCTaGGAGATGGGCATCAGGGTACAGGATCTCCAGGGT +
Preference number: 6 (lower is better)
Translates to: AAPMAIDIKVLS*EMGIRVQDLQG
Trigger: ACCCTGGAGATCCTGTACCCTGATGCCCATCTCTCAGCTGAGGACTTTAATATCTATGGCCATGGGGGCCGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000469111.5
ENST00000483868.5
ENST00000489960.5
ENST00000490290.5
ENST00000648957.1
CDS GCA 72 bp GCGGGTGATCTCCCACAGGATCTTATCAGCAACAGTTaGAGCGTTCGAGGTGCTCACCGTCATGGATACCAC +
Preference number: 6 (lower is better)
Translates to: AGDLPQDLISNS*SVRGAHRHGYH
Trigger: GTGGTATCCATGACGGTGAGCACCTCGAACGCTGCAACTGTTGCTGATAAGATCCTGTGGGAGATCACCCGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000469111.5
ENST00000483868.5
ENST00000489960.5
ENST00000490290.5
ENST00000490643.5
ENST00000648957.1
CDS CCA 72 bp AAGCCTGTCCCAGGCTGCCTGAGTGTCCTCAAGACATaGATGCTGCCTTCTCTCAGAGTGAGCAAAGCTGCA +
Preference number: 6 (lower is better)
Translates to: KPVPGCLSVLKT*MLPSLRVSKAA
Trigger: TGCAGCTTTGCTCACTCTGAGAGAAGGCAGCATCCATGTCTTGAGGACACTCAGGCAGCCTGGGACAGGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648957.1
CDS TCA 72 bp TCACACTCAGCTCGATGGCCAGCAGGAAGAAGCGGGTaGTCTCCCACAGGATCTTATCAGCAACAGTTGCAG +
Preference number: 6 (lower is better)
Translates to: SHSARWPAGRSG*SPTGSYQQQLQ
Trigger: CTGCAACTGTTGCTGATAAGATCCTGTGGGAGATCACCCGCTTCTTCCTGCTGGCCATCGAGCTGAGTGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000296210.11
ENST00000355552.8
ENST00000393400.6
ENST00000450633.6
ENST00000469111.5
ENST00000483868.5
ENST00000489960.5
ENST00000490290.5
ENST00000490643.5
ENST00000648957.1
CDS GCA 72 bp CACATGTGGGTGGGTGTGCGTATATCTGTGTGCATGTaGATGTGTATCTGTATGTGTGTGCCCAAGTGCATG +
Preference number: 6 (lower is better)
Translates to: HMWVGVRISVCM*MCICMCVPKCM
Trigger: CATGCACTTGGGCACACACATACAGATACACATGCACATGCACACAGATATACGCACACCCACCCACATGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465915.1