RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TPR (Homo sapiens)

Ensembl gene IDs: ENSG00000047410

Ensembl transcript IDs: ENST00000367478.9, ENST00000451586.1, ENST00000467810.1, ENST00000469463.1, ENST00000474852.1, ENST00000481347.1, ENST00000491783.5, ENST00000492973.1, ENST00000613151.1

Found 401 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TACTGTGGAGAGGACTTCCAAATGTGGTTACCTCAGCTATATCACTaGCCAACATCAGAAAACCTGACGGCTATGATTACTATGCCTTTT +
Preference number: 1 (lower is better)
Translates to: YCGEDFQMWLPQLYH*PTSENLTAMITMPF
Trigger: AAAAGGCATAGTAATCATAGCCGTCAGGTTTTCTGATGTTGGGCAGTGATATAGCTGAGGTAACCACATTTGGAAGTCCTCTCCACAGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367478.9
3UTR GCA 90 bp GGCAGCATTCAGCAGTATATTTATAAACAGGAACCTGTACAGAAGTaGCCTGGAAGAAGGCCTGCTCTAAATTATCCAGTGTATGGAGAA +
Preference number: 1 (lower is better)
Translates to: GSIQQYIYKQEPVQK*PGRRPALNYPVYGE
Trigger: TTCTCCATACACTGGATAATTTAGAGCAGGCCTTCTTCCAGGGCACTTCTGTACAGGTTCCTGTTTATAAATATACTGCTGAATGCTGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367478.9
3UTR CCA 90 bp CCACTTACAGGTGTCCTTCATAATGAAGTTAAAGTGAGTATACTGTaGAGAGGACTTCCAAATGTGGTTACCTCAGCTATATCACTGCCC +
Preference number: 1 (lower is better)
Translates to: PLTGVLHNEVKVSIL*RGLPNVVTSAISLP
Trigger: GGGCAGTGATATAGCTGAGGTAACCACATTTGGAAGTCCTCTCCACAGTATACTCACTTTAACTTCATTATGAAGGACACCTGTAAGTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367478.9
3UTR-3UTR CCA 90 bp AGGAGACGTCGCTTTGAACGTGCTATAGGACCTTCTCAAACACACACCATCAGAGAGGACTTCCAAATGTaGTTACCTCAGCTATATCAC +
Preference number: 2 (lower is better)
Translates to: RRRRFERAIGPSQTHTIREDFQM*LPQLYH
Trigger: GTGATATAGCTGAGGTAACCACATTTGGAAGTCCTC...TCTGATGGTGTGTGTTTGAGAAGGTCCTATAGCACGTTCAAAGCGACGTCTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367478.9
3UTR-3UTR CCA 90 bp AGGAGACGTCGCTTTGAACGTGCTATAGGACCTTCTCAAACACACACCATCAGAATTCACCTGCCAGACTaGCTTATCAAGACAAAGGTA +
Preference number: 2 (lower is better)
Translates to: RRRRFERAIGPSQTHTIRIHLPD*LIKTKV
Trigger: TACCTTTGTCTTGATAAGCCAGTCTGGCAGGTGAAT...TCTGATGGTGTGTGTTTGAGAAGGTCCTATAGCACGTTCAAAGCGACGTCTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367478.9
3UTR-3UTR CCA 90 bp AGGAGACGTCGCTTTGAACGTGCTATAGGACCTTCTCAAACACACACCATCAGAAAAGTGAGTATACTGTaGAGAGGACTTCCAAATGTG +
Preference number: 2 (lower is better)
Translates to: RRRRFERAIGPSQTHTIRKVSIL*RGLPNV
Trigger: CACATTTGGAAGTCCTCTCCACAGTATACTCACTTT...TCTGATGGTGTGTGTTTGAGAAGGTCCTATAGCACGTTCAAAGCGACGTCTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367478.9
3UTR-3UTR GCA 90 bp GTGGTTACCTCAGCTATATCACTGCCCAACATCAGAAAACCTGACGGCTATGATACTATAACATTGATGTaGCTAGTAGAACAGCAAGAG +
Preference number: 2 (lower is better)
Translates to: VVTSAISLPNIRKPDGYDTITLM*LVEQQE
Trigger: CTCTTGCTGTTCTACTAGGCACATCAATGTTATAGT...ATCATAGCCGTCAGGTTTTCTGATGTTGGGCAGTGATATAGCTGAGGTAACCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367478.9
3UTR-3UTR GCA 90 bp GTGGTTACCTCAGCTATATCACTGCCCAACATCAGAAAACCTGACGGCTATGATAATGATTTGCATCACTaGAGAGTCTGTAAGATCAGA +
Preference number: 2 (lower is better)
Translates to: VVTSAISLPNIRKPDGYDNDLHH*RVCKIR
Trigger: TCTGATCTTACAGACTCTGCAGTGATGCAAATCATT...ATCATAGCCGTCAGGTTTTCTGATGTTGGGCAGTGATATAGCTGAGGTAACCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367478.9
3UTR-3UTR GCA 90 bp AGGAGACGTCGCTTTGAACGTGCTATAGGACCTTCTCAAACACACACCATCAGAACTGCAATTCAATTCTaGTCTAACCTTCATGAGATT +
Preference number: 2 (lower is better)
Translates to: RRRRFERAIGPSQTHTIRTAIQF*SNLHEI
Trigger: AATCTCATGAAGGTTAGAGCAGAATTGAATTGCAGT...TCTGATGGTGTGTGTTTGAGAAGGTCCTATAGCACGTTCAAAGCGACGTCTCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367478.9
3UTR-3UTR GCA 90 bp CCCTCAATAGTTCTACATCAGAGGGCTAAAACTGAGATTAAAACTCAGATGTCTCCTCAGCTATATCACTaGCCAACATCAGAAAACCTG +
Preference number: 2 (lower is better)
Translates to: PSIVLHQRAKTEIKTQMSPQLYH*PTSENL
Trigger: CAGGTTTTCTGATGTTGGGCAGTGATATAGCTGAGG...AGACATCTGAGTTTTAATCTCAGTTTTAGCCCTCTGATGTAGAACTATTGAGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367478.9
3UTR-3UTR CCA 90 bp CACTGCCCAACATCAGAAAACCTGACGGCTATGATTACTATGCCTTTTCTAAAGAATTACTACTCGTTCTaGGCAGACCTTATCCAAAGT +
Preference number: 2 (lower is better)
Translates to: HCPTSENLTAMITMPFLKNYYSF*ADLIQS
Trigger: ACTTTGGATAAGGTCTGCCCAGAACGAGTAGTAATT...CTTTAGAAAAGGCATAGTAATCATAGCCGTCAGGTTTTCTGATGTTGGGCAGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367478.9
3UTR GCA 72 bp ACAGGAACCTGTACAGAAGTGCCCTGGAAGAAGGCCTaGTCTAAATTATCCAGTGTATGGAGAAACGACACA +
Preference number: 3 (lower is better)
Translates to: TGTCTEVPWKKA*SKLSSVWRNDT
Trigger: TGTGTCGTTTCTCCATACACTGGATAATTTAGAGCAGGCCTTCTTCCAGGGCACTTCTGTACAGGTTCCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367478.9
3UTR GCA 72 bp GAGGACTTCCAAATGTGGTTACCTCAGCTATATCACTaGCCAACATCAGAAAACCTGACGGCTATGATTACT +
Preference number: 3 (lower is better)
Translates to: EDFQMWLPQLYH*PTSENLTAMIT
Trigger: AGTAATCATAGCCGTCAGGTTTTCTGATGTTGGGCAGTGATATAGCTGAGGTAACCACATTTGGAAGTCCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367478.9
3UTR-3UTR CAA 90 bp GTGGTTACCTCAGCTATATCACTGCCCAACATCAGAAAACCTGACGGCTATGATCAAGGTTATAATGATTaGCATCACTGCAGAGTCTGT +
Preference number: 3 (lower is better)
Translates to: VVTSAISLPNIRKPDGYDQGYND*HHCRVC
Trigger: ACAGACTCTGCAGTGATGCAAATCATTATAACCTTG...ATCATAGCCGTCAGGTTTTCTGATGTTGGGCAGTGATATAGCTGAGGTAACCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367478.9
3UTR GCA 72 bp CAGCAGTATATTTATAAACAGGAACCTGTACAGAAGTaGCCTGGAAGAAGGCCTGCTCTAAATTATCCAGTG +
Preference number: 3 (lower is better)
Translates to: QQYIYKQEPVQK*PGRRPALNYPV
Trigger: CACTGGATAATTTAGAGCAGGCCTTCTTCCAGGGCACTTCTGTACAGGTTCCTGTTTATAAATATACTGCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367478.9
3UTR GCA 72 bp CATTTACTTTCGCTTCACAAATGTGCATGTCATCCTTaGACAAGGGCCATGCTAATCTCTGTATCATTCCAG +
Preference number: 3 (lower is better)
Translates to: HLLSLHKCACHP*TRAMLISVSFQ
Trigger: CTGGAATGATACAGAGATTAGCATGGCCCTTGTGCAAGGATGACATGCACATTTGTGAAGCGAAAGTAAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367478.9
3UTR GCA 72 bp ACTGATAGAATGTCATTTACTTTCGCTTCACAAATGTaGATGTCATCCTTGCACAAGGGCCATGCTAATCTC +
Preference number: 3 (lower is better)
Translates to: TDRMSFTFASQM*MSSLHKGHANL
Trigger: GAGATTAGCATGGCCCTTGTGCAAGGATGACATGCACATTTGTGAAGCGAAAGTAAATGACATTCTATCAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367478.9
3UTR CCA 72 bp CACACACCATCAGAATTCAATATTCACCTGCCAGACTaGCTTATCAAGACAAAGGTAACATTTTTATTGTGT +
Preference number: 3 (lower is better)
Translates to: HTPSEFNIHLPD*LIKTKVTFLLC
Trigger: ACACAATAAAAATGTTACCTTTGTCTTGATAAGCCAGTCTGGCAGGTGAATATTGAATTCTGATGGTGTGTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR CCA 90 bp CACTGCCCAACATCAGAAAACCTGACGGCTATGATTACTATGCCTTTTCTAAAGTATCACCTCGCTCGGTaGCTCGCGCGCGCCCGCCCG +
Preference number: 4 (lower is better)
Translates to: HCPTSENLTAMITMPFLKYHLAR*LARARP
Trigger: CGGGCGGGCGCGCGCGAGCCACCGAGCGAGGTGATA...CTTTAGAAAAGGCATAGTAATCATAGCCGTCAGGTTTTCTGATGTTGGGCAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR CCA 90 bp ACAGGTGTCCTTCATAATGAAGTTAAAGTGAGTATACTGTGGAGAGGACTTCCACCGCCGCCATGTCGGTaGGGCCAGGGACCCCAGTGG +
Preference number: 4 (lower is better)
Translates to: TGVLHNEVKVSILWRGLPPPPCR*GQGPQW
Trigger: CCACTGGGGTCCCTGGCCCCACCGACATGGCGGCGG...TGGAAGTCCTCTCCACAGTATACTCACTTTAACTTCATTATGAAGGACACCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR TCA 90 bp ACAGGTGTCCTTCATAATGAAGTTAAAGTGAGTATACTGTGGAGAGGACTTCCAGGGCGTCTCGGTGACTaGGGTGCTCGAGGGGCCTGT +
Preference number: 4 (lower is better)
Translates to: TGVLHNEVKVSILWRGLPGRLGD*GARGAC
Trigger: ACAGGCCCCTCGAGCACCTCAGTCACCGAGACGCCC...TGGAAGTCCTCTCCACAGTATACTCACTTTAACTTCATTATGAAGGACACCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR CCA 90 bp CTATATCACTGCCCAACATCAGAAAACCTGACGGCTATGATTACTATGCCTTTTCCCGCGGCGGGACCCTaGGAAATCGAGTCCACCCTC +
Preference number: 4 (lower is better)
Translates to: LYHCPTSENLTAMITMPFPAAGP*EIESTL
Trigger: GAGGGTGGACTCGATTTCCCAGGGTCCCGCCGCGGG...AAAAGGCATAGTAATCATAGCCGTCAGGTTTTCTGATGTTGGGCAGTGATATAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR CCA 90 bp ACAGGTGTCCTTCATAATGAAGTTAAAGTGAGTATACTGTGGAGAGGACTTCCACAGGACCCAGACGCCTaGGCCGCCGCCTCTATCACC +
Preference number: 4 (lower is better)
Translates to: TGVLHNEVKVSILWRGLPQDPDA*AAASIT
Trigger: GGTGATAGAGGCGGCGGCCCAGGCGTCTGGGTCCTG...TGGAAGTCCTCTCCACAGTATACTCACTTTAACTTCATTATGAAGGACACCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR GCA 90 bp AGGAGACGTCGCTTTGAACGTGCTATAGGACCTTCTCAAACACACACCATCAGACTTAGCTACAGCTGCTaGAGTAGGAGACATGGCGGC +
Preference number: 4 (lower is better)
Translates to: RRRRFERAIGPSQTHTIRLSYSC*SRRHGG
Trigger: GCCGCCATGTCTCCTACTGCAGCAGCTGTAGCTAAG...TCTGATGGTGTGTGTTTGAGAAGGTCCTATAGCACGTTCAAAGCGACGTCTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR TCA 90 bp GTGGTTACCTCAGCTATATCACTGCCCAACATCAGAAAACCTGACGGCTATGATTGGTCTCCAGAGGACTaGGCCGATGTCTCCATAACC +
Preference number: 4 (lower is better)
Translates to: VVTSAISLPNIRKPDGYDWSPED*ADVSIT
Trigger: GGTTATGGAGACATCGGCTCAGTCCTCTGGAGACCA...ATCATAGCCGTCAGGTTTTCTGATGTTGGGCAGTGATATAGCTGAGGTAACCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR CCA 90 bp TTTACTTTCGCTTCACAAATGTGCATGTCATCCTTGCACAAGGGCCATGCTAATCAGTCTTGGGGGAAGTaGATGTGGTGGGCGTCTCGG +
Preference number: 4 (lower is better)
Translates to: FTFASQMCMSSLHKGHANQSWGK*MWWASR
Trigger: CCGAGACGCCCACCACATCCACTTCCCCCAAGACTG...ATTAGCATGGCCCTTGTGCAAGGATGACATGCACATTTGTGAAGCGAAAGTAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR TCA 90 bp AGGAGACGTCGCTTTGAACGTGCTATAGGACCTTCTCAAACACACACCATCAGACAACAGGAGTTGGCTTaGTATTGGCTGTTGGTGGGT +
Preference number: 4 (lower is better)
Translates to: RRRRFERAIGPSQTHTIRQQELA*YWLLVG
Trigger: ACCCACCAACAGCCAATATCAAGCCAACTCCTGTTG...TCTGATGGTGTGTGTTTGAGAAGGTCCTATAGCACGTTCAAAGCGACGTCTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR GCA 90 bp CCCTCAATAGTTCTACATCAGAGGGCTAAAACTGAGATTAAAACTCAGATGTCTGTGCGCTCCAGGACTTaGTGCAACACCGCCGCCATG +
Preference number: 4 (lower is better)
Translates to: PSIVLHQRAKTEIKTQMSVRSRT*CNTAAM
Trigger: CATGGCGGCGGTGTTGCAGCAAGTCCTGGAGCGCAC...AGACATCTGAGTTTTAATCTCAGTTTTAGCCCTCTGATGTAGAACTATTGAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR CCA 90 bp GTGGTTACCTCAGCTATATCACTGCCCAACATCAGAAAACCTGACGGCTATGATTGTTCTGGACAGACTTaGGCAGCTTGTTCAGCTCCG +
Preference number: 4 (lower is better)
Translates to: VVTSAISLPNIRKPDGYDCSGQT*AACSAP
Trigger: CGGAGCTGAACAAGCTGCCCAAGTCTGTCCAGAACA...ATCATAGCCGTCAGGTTTTCTGATGTTGGGCAGTGATATAGCTGAGGTAACCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR CCA 90 bp AGGAGACGTCGCTTTGAACGTGCTATAGGACCTTCTCAAACACACACCATCAGATGGCATATCTTCAGGTaGCCCAAACCGGAATCTAGG +
Preference number: 4 (lower is better)
Translates to: RRRRFERAIGPSQTHTIRWHIFR*PKPESR
Trigger: CCTAGATTCCGGTTTGGGCCACCTGAAGATATGCCA...TCTGATGGTGTGTGTTTGAGAAGGTCCTATAGCACGTTCAAAGCGACGTCTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR TCA 90 bp GTGGTTACCTCAGCTATATCACTGCCCAACATCAGAAAACCTGACGGCTATGATTCTCTTGATGCTCCCTaGGTTCTCTTTCCAAGCGAC +
Preference number: 4 (lower is better)
Translates to: VVTSAISLPNIRKPDGYDSLDAP*VLFPSD
Trigger: GTCGCTTGGAAAGAGAACTCAGGGAGCATCAAGAGA...ATCATAGCCGTCAGGTTTTCTGATGTTGGGCAGTGATATAGCTGAGGTAACCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR TCA 90 bp CACTGCCCAACATCAGAAAACCTGACGGCTATGATTACTATGCCTTTTCTAAAGGGCTGTTGGTGGGTCTaGTGTGCTGGCAATTCCTCT +
Preference number: 4 (lower is better)
Translates to: HCPTSENLTAMITMPFLKGCWWV*CAGNSS
Trigger: AGAGGAATTGCCAGCACATCAGACCCACCAACAGCC...CTTTAGAAAAGGCATAGTAATCATAGCCGTCAGGTTTTCTGATGTTGGGCAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR GCA 90 bp CACTGCCCAACATCAGAAAACCTGACGGCTATGATTACTATGCCTTTTCTAAAGTCCTCTCCCTCCCATTaGATGGCTCACACCTCTCTG +
Preference number: 4 (lower is better)
Translates to: HCPTSENLTAMITMPFLKSSPSH*MAHTSL
Trigger: CAGAGAGGTGTGAGCCATGCAATGGGAGGGAGAGGA...CTTTAGAAAAGGCATAGTAATCATAGCCGTCAGGTTTTCTGATGTTGGGCAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR CCA 90 bp AGGAGACGTCGCTTTGAACGTGCTATAGGACCTTCTCAAACACACACCATCAGAAGTTCCTGCATTTCCTaGACTGAAACATGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: RRRRFERAIGPSQTHTIRSSCIS*TETCCS
Trigger: GGAGCAGCATGTTTCAGTCCAGGAAATGCAGGAACT...TCTGATGGTGTGTGTTTGAGAAGGTCCTATAGCACGTTCAAAGCGACGTCTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR CCA 90 bp GTGGTTACCTCAGCTATATCACTGCCCAACATCAGAAAACCTGACGGCTATGATGTGGGTCTGATGTGCTaGCAATTCCTCTTTCACCAG +
Preference number: 4 (lower is better)
Translates to: VVTSAISLPNIRKPDGYDVGLMC*QFLFHQ
Trigger: CTGGTGAAAGAGGAATTGCCAGCACATCAGACCCAC...ATCATAGCCGTCAGGTTTTCTGATGTTGGGCAGTGATATAGCTGAGGTAACCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR CCA 90 bp TTTACTTTCGCTTCACAAATGTGCATGTCATCCTTGCACAAGGGCCATGCTAATGAGGATCCTGGCTGGTaGAGGGGAGATCTGACTCAT +
Preference number: 4 (lower is better)
Translates to: FTFASQMCMSSLHKGHANEDPGW*RGDLTH
Trigger: ATGAGTCAGATCTCCCCTCCACCAGCCAGGATCCTC...ATTAGCATGGCCCTTGTGCAAGGATGACATGCACATTTGTGAAGCGAAAGTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR CCA 90 bp TTTACTTTCGCTTCACAAATGTGCATGTCATCCTTGCACAAGGGCCATGCTAATAAGGAGGATCCTGGCTaGTGGAGGGGAGATCTGACT +
Preference number: 4 (lower is better)
Translates to: FTFASQMCMSSLHKGHANKEDPG*WRGDLT
Trigger: AGTCAGATCTCCCCTCCACCAGCCAGGATCCTCCTT...ATTAGCATGGCCCTTGTGCAAGGATGACATGCACATTTGTGAAGCGAAAGTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR CCA 90 bp AGGAGACGTCGCTTTGAACGTGCTATAGGACCTTCTCAAACACACACCATCAGATGTACAGAAGTGCCCTaGAAGAAGGCCTGCTCTAAA +
Preference number: 4 (lower is better)
Translates to: RRRRFERAIGPSQTHTIRCTEVP*KKACSK
Trigger: TTTAGAGCAGGCCTTCTTCCAGGGCACTTCTGTACA...TCTGATGGTGTGTGTTTGAGAAGGTCCTATAGCACGTTCAAAGCGACGTCTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR TCA 90 bp GTGGTTACCTCAGCTATATCACTGCCCAACATCAGAAAACCTGACGGCTATGATTCCTCCTGCAATCGCTaGATCTCCTTCATAGCTTGT +
Preference number: 4 (lower is better)
Translates to: VVTSAISLPNIRKPDGYDSSCNR*ISFIAC
Trigger: ACAAGCTATGAAGGAGATTCAGCGATTGCAGGAGGA...ATCATAGCCGTCAGGTTTTCTGATGTTGGGCAGTGATATAGCTGAGGTAACCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR TCA 90 bp GTGGTTACCTCAGCTATATCACTGCCCAACATCAGAAAACCTGACGGCTATGATCGTGAAAGTTCAGACTaGAGTTGCACAGTCTGTTCC +
Preference number: 4 (lower is better)
Translates to: VVTSAISLPNIRKPDGYDRESSD*SCTVCS
Trigger: GGAACAGACTGTGCAACTTCAGTCTGAACTTTCACG...ATCATAGCCGTCAGGTTTTCTGATGTTGGGCAGTGATATAGCTGAGGTAACCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR TCA 90 bp GTGGTTACCTCAGCTATATCACTGCCCAACATCAGAAAACCTGACGGCTATGATTCAAGGTGTCTCTCTTaGTGCTCCCTGAGTTCTCTT +
Preference number: 4 (lower is better)
Translates to: VVTSAISLPNIRKPDGYDSRCLS*CSLSSL
Trigger: AAGAGAACTCAGGGAGCATCAAGAGAGACACCTTGA...ATCATAGCCGTCAGGTTTTCTGATGTTGGGCAGTGATATAGCTGAGGTAACCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR TCA 90 bp CACTGCCCAACATCAGAAAACCTGACGGCTATGATTACTATGCCTTTTCTAAAGAGGCCGCTCAACTGGTaGACTCTGAACAACCTCTAC +
Preference number: 4 (lower is better)
Translates to: HCPTSENLTAMITMPFLKRPLNW*TLNNLY
Trigger: GTAGAGGTTGTTCAGAGTTCACCAGTTGAGCGGCCT...CTTTAGAAAAGGCATAGTAATCATAGCCGTCAGGTTTTCTGATGTTGGGCAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR TCA 90 bp TTTACTTTCGCTTCACAAATGTGCATGTCATCCTTGCACAAGGGCCATGCTAATGACTCATCAGATGCTTaGACCGGCTCTTCTTCCTGC +
Preference number: 4 (lower is better)
Translates to: FTFASQMCMSSLHKGHANDSSDA*TGSSSC
Trigger: GCAGGAAGAAGAGCCGGTTCAAGCATCTGATGAGTC...ATTAGCATGGCCCTTGTGCAAGGATGACATGCACATTTGTGAAGCGAAAGTAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR TCA 90 bp CACTGCCCAACATCAGAAAACCTGACGGCTATGATTACTATGCCTTTTCTAAAGGGTGGAGGGGAGATCTaGCTCATCAGATGCTTGAAC +
Preference number: 4 (lower is better)
Translates to: HCPTSENLTAMITMPFLKGGGEI*LIRCLN
Trigger: GTTCAAGCATCTGATGAGTCAGATCTCCCCTCCACC...CTTTAGAAAAGGCATAGTAATCATAGCCGTCAGGTTTTCTGATGTTGGGCAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR GCA 90 bp GTGGTTACCTCAGCTATATCACTGCCCAACATCAGAAAACCTGACGGCTATGATAACTGTGCCAAATACTaGTGTGGAAGTAGAAGGCCG +
Preference number: 4 (lower is better)
Translates to: VVTSAISLPNIRKPDGYDNCAKY*CGSRRP
Trigger: CGGCCTTCTACTTCCACAGCAGTATTTGGCACAGTT...ATCATAGCCGTCAGGTTTTCTGATGTTGGGCAGTGATATAGCTGAGGTAACCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR GCA 90 bp TTTACTTTCGCTTCACAAATGTGCATGTCATCCTTGCACAAGGGCCATGCTAATGAACCTGTACAGAAGTaGCCTGGAAGAAGGCCTGCT +
Preference number: 4 (lower is better)
Translates to: FTFASQMCMSSLHKGHANEPVQK*PGRRPA
Trigger: AGCAGGCCTTCTTCCAGGGCACTTCTGTACAGGTTC...ATTAGCATGGCCCTTGTGCAAGGATGACATGCACATTTGTGAAGCGAAAGTAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR CCA 90 bp GTGGTTACCTCAGCTATATCACTGCCCAACATCAGAAAACCTGACGGCTATGATGCTGCTCCTCCTGTGTaGTTCTATCTTGAAGATCCT +
Preference number: 4 (lower is better)
Translates to: VVTSAISLPNIRKPDGYDAAPPV*FYLEDP
Trigger: AGGATCTTCAAGATAGAACCACACAGGAGGAGCAGC...ATCATAGCCGTCAGGTTTTCTGATGTTGGGCAGTGATATAGCTGAGGTAACCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR CCA 90 bp ACAGGTGTCCTTCATAATGAAGTTAAAGTGAGTATACTGTGGAGAGGACTTCCATGCAGGTGTAACCATTaGGCGGATACTAGCCCTGGG +
Preference number: 4 (lower is better)
Translates to: TGVLHNEVKVSILWRGLPCRCNH*ADTSPG
Trigger: CCCAGGGCTAGTATCCGCCCAATGGTTACACCTGCA...TGGAAGTCCTCTCCACAGTATACTCACTTTAACTTCATTATGAAGGACACCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR CCA 90 bp TTTACTTTCGCTTCACAAATGTGCATGTCATCCTTGCACAAGGGCCATGCTAATCATGCCACCTATTCCTaGAGTCAACTGAAGGCCACG +
Preference number: 4 (lower is better)
Translates to: FTFASQMCMSSLHKGHANHATYS*SQLKAT
Trigger: CGTGGCCTTCAGTTGACTCCAGGAATAGGTGGCATG...ATTAGCATGGCCCTTGTGCAAGGATGACATGCACATTTGTGAAGCGAAAGTAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR CCA 90 bp AGGAGACGTCGCTTTGAACGTGCTATAGGACCTTCTCAAACACACACCATCAGAGGATGTAGTCACCATTaGAACAGATTGAGAGGCATG +
Preference number: 4 (lower is better)
Translates to: RRRRFERAIGPSQTHTIRGCSHH*NRLRGM
Trigger: CATGCCTCTCAATCTGTTCCAATGGTGACTACATCC...TCTGATGGTGTGTGTTTGAGAAGGTCCTATAGCACGTTCAAAGCGACGTCTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR TCA 90 bp GTGGTTACCTCAGCTATATCACTGCCCAACATCAGAAAACCTGACGGCTATGATTCGATCTCGGATTGCTaGTCAGCAAGGAACTTTTCA +
Preference number: 4 (lower is better)
Translates to: VVTSAISLPNIRKPDGYDSISDC*SARNFS
Trigger: TGAAAAGTTCCTTGCTGATCAGCAATCCGAGATCGA...ATCATAGCCGTCAGGTTTTCTGATGTTGGGCAGTGATATAGCTGAGGTAACCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR TCA 90 bp CTATATCACTGCCCAACATCAGAAAACCTGACGGCTATGATTACTATGCCTTTTCGCAGACTCTCAACCTaGGCCACCTCAAACCTAGTT +
Preference number: 4 (lower is better)
Translates to: LYHCPTSENLTAMITMPFRRLST*ATSNLV
Trigger: AACTAGGTTTGAGGTGGCTCAGGTTGAGAGTCTGCG...AAAAGGCATAGTAATCATAGCCGTCAGGTTTTCTGATGTTGGGCAGTGATATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR TCA 90 bp AGGAGACGTCGCTTTGAACGTGCTATAGGACCTTCTCAAACACACACCATCAGATTATTAGAAGGTTCTTaGGGCTCATCTCTCTGCTCA +
Preference number: 4 (lower is better)
Translates to: RRRRFERAIGPSQTHTIRLLEGS*GSSLCS
Trigger: TGAGCAGAGAGATGAGCCTCAAGAACCTTCTAATAA...TCTGATGGTGTGTGTTTGAGAAGGTCCTATAGCACGTTCAAAGCGACGTCTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR TCA 90 bp TTTACTTTCGCTTCACAAATGTGCATGTCATCCTTGCACAAGGGCCATGCTAATTTGACCATCCTGGGATaGAGTTGTCGTCTGCTGATC +
Preference number: 4 (lower is better)
Translates to: FTFASQMCMSSLHKGHANLTILG*SCRLLI
Trigger: GATCAGCAGACGACAACTTCATCCCAGGATGGTCAA...ATTAGCATGGCCCTTGTGCAAGGATGACATGCACATTTGTGAAGCGAAAGTAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR GCA 90 bp AGGAGACGTCGCTTTGAACGTGCTATAGGACCTTCTCAAACACACACCATCAGATTCCTCACCTTTGCTTaGATTTGCTGTAGATCCTGT +
Preference number: 4 (lower is better)
Translates to: RRRRFERAIGPSQTHTIRFLTFA*ICCRSC
Trigger: ACAGGATCTACAGCAAATGCAAGCAAAGGTGAGGAA...TCTGATGGTGTGTGTTTGAGAAGGTCCTATAGCACGTTCAAAGCGACGTCTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR GCA 90 bp GTGGTTACCTCAGCTATATCACTGCCCAACATCAGAAAACCTGACGGCTATGATCTGCGGCGAATGAATTaGTTCAGCAAATCCATCAGT +
Preference number: 4 (lower is better)
Translates to: VVTSAISLPNIRKPDGYDLRRMN*FSKSIS
Trigger: ACTGATGGATTTGCTGAAGCAATTCATTCGCCGCAG...ATCATAGCCGTCAGGTTTTCTGATGTTGGGCAGTGATATAGCTGAGGTAACCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR GCA 90 bp GTGGTTACCTCAGCTATATCACTGCCCAACATCAGAAAACCTGACGGCTATGATCCCTGGAAGAAGGCCTaGTCTAAATTATCCAGTGTA +
Preference number: 4 (lower is better)
Translates to: VVTSAISLPNIRKPDGYDPWKKA*SKLSSV
Trigger: TACACTGGATAATTTAGAGCAGGCCTTCTTCCAGGG...ATCATAGCCGTCAGGTTTTCTGATGTTGGGCAGTGATATAGCTGAGGTAACCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR CCA 90 bp AGGAGACGTCGCTTTGAACGTGCTATAGGACCTTCTCAAACACACACCATCAGACACGCTGACGAACTATaGAATCAACAAGCTGCATTT +
Preference number: 4 (lower is better)
Translates to: RRRRFERAIGPSQTHTIRHADEL*NQQAAF
Trigger: AAATGCAGCTTGTTGATTCCATAGTTCGTCAGCGTG...TCTGATGGTGTGTGTTTGAGAAGGTCCTATAGCACGTTCAAAGCGACGTCTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR CCA 90 bp GTGGTTACCTCAGCTATATCACTGCCCAACATCAGAAAACCTGACGGCTATGATAGACACAACAGGAGTTaGCTTGATATTGGCTGTTGG +
Preference number: 4 (lower is better)
Translates to: VVTSAISLPNIRKPDGYDRHNRS*LDIGCW
Trigger: CCAACAGCCAATATCAAGCCAACTCCTGTTGTGTCT...ATCATAGCCGTCAGGTTTTCTGATGTTGGGCAGTGATATAGCTGAGGTAACCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR CCA 90 bp AGGAGACGTCGCTTTGAACGTGCTATAGGACCTTCTCAAACACACACCATCAGAGTATCATCAGAGACTTaGTCTGATGCTTCTATGGTG +
Preference number: 4 (lower is better)
Translates to: RRRRFERAIGPSQTHTIRVSSET*SDASMV
Trigger: CACCATAGAAGCATCAGACCAAGTCTCTGATGATAC...TCTGATGGTGTGTGTTTGAGAAGGTCCTATAGCACGTTCAAAGCGACGTCTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR CCA 90 bp CACTGCCCAACATCAGAAAACCTGACGGCTATGATTACTATGCCTTTTCTAAAGATGAATGGTCAGTCTTaGGGGAAGTGGATGTGGTGG +
Preference number: 4 (lower is better)
Translates to: HCPTSENLTAMITMPFLKMNGQS*GKWMWW
Trigger: CCACCACATCCACTTCCCCCAAGACTGACCATTCAT...CTTTAGAAAAGGCATAGTAATCATAGCCGTCAGGTTTTCTGATGTTGGGCAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR CCA 90 bp CCCTCAATAGTTCTACATCAGAGGGCTAAAACTGAGATTAAAACTCAGATGTCTGAGGTGGGGCATGAATaGTCAGTCTTGGGGGAAGTG +
Preference number: 4 (lower is better)
Translates to: PSIVLHQRAKTEIKTQMSEVGHE*SVLGEV
Trigger: CACTTCCCCCAAGACTGACCATTCATGCCCCACCTC...AGACATCTGAGTTTTAATCTCAGTTTTAGCCCTCTGATGTAGAACTATTGAGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR CCA 90 bp CTATATCACTGCCCAACATCAGAAAACCTGACGGCTATGATTACTATGCCTTTTTCCCAACTCCTGAGGTaGGGCATGAATGGTCAGTCT +
Preference number: 4 (lower is better)
Translates to: LYHCPTSENLTAMITMPFSQLLR*GMNGQS
Trigger: AGACTGACCATTCATGCCCCACCTCAGGAGTTGGGA...AAAAGGCATAGTAATCATAGCCGTCAGGTTTTCTGATGTTGGGCAGTGATATAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR CCA 90 bp GTGGTTACCTCAGCTATATCACTGCCCAACATCAGAAAACCTGACGGCTATGATTGGCACCACAAGAGTTaGAGTACTTGGAACTGTTCT +
Preference number: 4 (lower is better)
Translates to: VVTSAISLPNIRKPDGYDWHHKS*STWNCS
Trigger: AGAACAGTTCCAAGTACTCCAACTCTTGTGGTGCCA...ATCATAGCCGTCAGGTTTTCTGATGTTGGGCAGTGATATAGCTGAGGTAACCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR TCA 90 bp CACTGCCCAACATCAGAAAACCTGACGGCTATGATTACTATGCCTTTTCTAAAGTTCACAAGTCTCTCCTaGCTGTGGGACAACCTCTTT +
Preference number: 4 (lower is better)
Translates to: HCPTSENLTAMITMPFLKFTSLS*LWDNLF
Trigger: AAAGAGGTTGTCCCACAGTCAGGAGAGACTTGTGAA...CTTTAGAAAAGGCATAGTAATCATAGCCGTCAGGTTTTCTGATGTTGGGCAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR TCA 90 bp ACAGGTGTCCTTCATAATGAAGTTAAAGTGAGTATACTGTGGAGAGGACTTCCATCAAGCCGCAAGCTTTaGCACTCTCGGGTTTCATTC +
Preference number: 4 (lower is better)
Translates to: TGVLHNEVKVSILWRGLPSSRKL*HSRVSF
Trigger: GAATGAAACCCGAGAGTGTCAAAGCTTGCGGCTTGA...TGGAAGTCCTCTCCACAGTATACTCACTTTAACTTCATTATGAAGGACACCTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR TCA 90 bp TTTACTTTCGCTTCACAAATGTGCATGTCATCCTTGCACAAGGGCCATGCTAATTCAACAAGCTGCATTTaGTGCTGTCGTGATTTGCGG +
Preference number: 4 (lower is better)
Translates to: FTFASQMCMSSLHKGHANSTSCI*CCRDLR
Trigger: CCGCAAATCACGACAGCATCAAATGCAGCTTGTTGA...ATTAGCATGGCCCTTGTGCAAGGATGACATGCACATTTGTGAAGCGAAAGTAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR TCA 90 bp CTATATCACTGCCCAACATCAGAAAACCTGACGGCTATGATTACTATGCCTTTTCTGCATTTCCTGGACTaGAACATGCTGCTCCTGATG +
Preference number: 4 (lower is better)
Translates to: LYHCPTSENLTAMITMPFLHFLD*NMLLLM
Trigger: CATCAGGAGCAGCATGTTTCAGTCCAGGAAATGCAG...AAAAGGCATAGTAATCATAGCCGTCAGGTTTTCTGATGTTGGGCAGTGATATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR TCA 90 bp ACAGGTGTCCTTCATAATGAAGTTAAAGTGAGTATACTGTGGAGAGGACTTCCAACTAGCCCTGGGTGTTaGCTTATTTCCAGCCATAGC +
Preference number: 4 (lower is better)
Translates to: TGVLHNEVKVSILWRGLPTSPGC*LISSHS
Trigger: GCTATGGCTGGAAATAAGTCAACACCCAGGGCTAGT...TGGAAGTCCTCTCCACAGTATACTCACTTTAACTTCATTATGAAGGACACCTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR TCA 90 bp GTGGTTACCTCAGCTATATCACTGCCCAACATCAGAAAACCTGACGGCTATGATCAGTTCCTACAGGTGTaGCACTTTTCAACTTCTTTG +
Preference number: 4 (lower is better)
Translates to: VVTSAISLPNIRKPDGYDQFLQV*HFSTSL
Trigger: CAAAGAAGTTGAAAAGTGTCACACCTGTAGGAACTG...ATCATAGCCGTCAGGTTTTCTGATGTTGGGCAGTGATATAGCTGAGGTAACCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR TCA 90 bp CTATATCACTGCCCAACATCAGAAAACCTGACGGCTATGATTACTATGCCTTTTTGTCGTCTGCTGATCTaGTTGAAGTGGCCCAAGATC +
Preference number: 4 (lower is better)
Translates to: LYHCPTSENLTAMITMPFCRLLI*LKWPKI
Trigger: GATCTTGGGCCACTTCAATCAGATCAGCAGACGACA...AAAAGGCATAGTAATCATAGCCGTCAGGTTTTCTGATGTTGGGCAGTGATATAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR TCA 90 bp CCCTCAATAGTTCTACATCAGAGGGCTAAAACTGAGATTAAAACTCAGATGTCTATTCCTGGAGTCAACTaGAGGCCACGTCCTACAGAC +
Preference number: 4 (lower is better)
Translates to: PSIVLHQRAKTEIKTQMSIPGVN*RPRPTD
Trigger: GTCTGTAGGACGTGGCCTTCAGTTGACTCCAGGAAT...AGACATCTGAGTTTTAATCTCAGTTTTAGCCCTCTGATGTAGAACTATTGAGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR TCA 90 bp TTTACTTTCGCTTCACAAATGTGCATGTCATCCTTGCACAAGGGCCATGCTAATACCATTGGAACAGATTaGGAGGCATGTTCCGAAGCA +
Preference number: 4 (lower is better)
Translates to: FTFASQMCMSSLHKGHANTIGTD*EACSEA
Trigger: TGCTTCGGAACATGCCTCTCAATCTGTTCCAATGGT...ATTAGCATGGCCCTTGTGCAAGGATGACATGCACATTTGTGAAGCGAAAGTAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR TCA 90 bp ACAGGTGTCCTTCATAATGAAGTTAAAGTGAGTATACTGTGGAGAGGACTTCCACTCTGTCTGTTAAACTaGCGACCACGGACACCTTGT +
Preference number: 4 (lower is better)
Translates to: TGVLHNEVKVSILWRGLPLCLLN*RPRTPC
Trigger: ACAAGGTGTCCGTGGTCGTCAGTTTAACAGACAGAG...TGGAAGTCCTCTCCACAGTATACTCACTTTAACTTCATTATGAAGGACACCTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR GCA 90 bp AGGAGACGTCGCTTTGAACGTGCTATAGGACCTTCTCAAACACACACCATCAGAGCGTTTCAAAATTGGTaGTTTGGCTTCCACTTCTTT +
Preference number: 4 (lower is better)
Translates to: RRRRFERAIGPSQTHTIRAFQNW*FGFHFF
Trigger: AAAGAAGTGGAAGCCAAAGCACCAATTTTGAAACGC...TCTGATGGTGTGTGTTTGAGAAGGTCCTATAGCACGTTCAAAGCGACGTCTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR GCA 90 bp AGGAGACGTCGCTTTGAACGTGCTATAGGACCTTCTCAAACACACACCATCAGATTTAAGTCATTCACCTaGTCTTCTGTCTGTCTTAGC +
Preference number: 4 (lower is better)
Translates to: RRRRFERAIGPSQTHTIRFKSFT*SSVCLS
Trigger: GCTAAGACAGACAGAAGAGCAGGTGAATGACTTAAA...TCTGATGGTGTGTGTTTGAGAAGGTCCTATAGCACGTTCAAAGCGACGTCTCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR GCA 90 bp AGGAGACGTCGCTTTGAACGTGCTATAGGACCTTCTCAAACACACACCATCAGAGTTTCTTTGAGTTCCTaGATTTCCTGGACTGAAACA +
Preference number: 4 (lower is better)
Translates to: RRRRFERAIGPSQTHTIRVSLSS*ISWTET
Trigger: TGTTTCAGTCCAGGAAATGCAGGAACTCAAAGAAAC...TCTGATGGTGTGTGTTTGAGAAGGTCCTATAGCACGTTCAAAGCGACGTCTCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR GCA 90 bp CTATATCACTGCCCAACATCAGAAAACCTGACGGCTATGATTACTATGCCTTTTACAGGCCCTTCTGACTaGATAGCTTCCTGTGATTCC +
Preference number: 4 (lower is better)
Translates to: LYHCPTSENLTAMITMPFTGPSD*IASCDS
Trigger: GGAATCACAGGAAGCTATGCAGTCAGAAGGGCCTGT...AAAAGGCATAGTAATCATAGCCGTCAGGTTTTCTGATGTTGGGCAGTGATATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR GCA 90 bp GTGGTTACCTCAGCTATATCACTGCCCAACATCAGAAAACCTGACGGCTATGATTTCGCTTCACAAATGTaGATGTCATCCTTGCACAAG +
Preference number: 4 (lower is better)
Translates to: VVTSAISLPNIRKPDGYDFASQM*MSSLHK
Trigger: CTTGTGCAAGGATGACATGCACATTTGTGAAGCGAA...ATCATAGCCGTCAGGTTTTCTGATGTTGGGCAGTGATATAGCTGAGGTAACCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR CCA 90 bp AGGAGACGTCGCTTTGAACGTGCTATAGGACCTTCTCAAACACACACCATCAGATGGCCTCTTTTAATTTaGTCAACAGATCCTCCACAT +
Preference number: 4 (lower is better)
Translates to: RRRRFERAIGPSQTHTIRWPLLI*STDPPH
Trigger: ATGTGGAGGATCTGTTGACCAAATTAAAAGAGGCCA...TCTGATGGTGTGTGTTTGAGAAGGTCCTATAGCACGTTCAAAGCGACGTCTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR CCA 90 bp GTGGTTACCTCAGCTATATCACTGCCCAACATCAGAAAACCTGACGGCTATGATTCATATTCCTCACGCTaGCGTTTCAAAATTGGTGCT +
Preference number: 4 (lower is better)
Translates to: VVTSAISLPNIRKPDGYDSYSSR*RFKIGA
Trigger: AGCACCAATTTTGAAACGCCAGCGTGAGGAATATGA...ATCATAGCCGTCAGGTTTTCTGATGTTGGGCAGTGATATAGCTGAGGTAACCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR CCA 90 bp GTGGTTACCTCAGCTATATCACTGCCCAACATCAGAAAACCTGACGGCTATGATCAGATGATTGCTTGTTaGCTTTATCAGTGTCCTCCT +
Preference number: 4 (lower is better)
Translates to: VVTSAISLPNIRKPDGYDQMIAC*LYQCPP
Trigger: AGGAGGACACTGATAAAGCCAACAAGCAATCATCTG...ATCATAGCCGTCAGGTTTTCTGATGTTGGGCAGTGATATAGCTGAGGTAACCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR CCA 90 bp TTTACTTTCGCTTCACAAATGTGCATGTCATCCTTGCACAAGGGCCATGCTAATCCTGACAGTCACGTCTaGCTTGCTGCTCATTACTTA +
Preference number: 4 (lower is better)
Translates to: FTFASQMCMSSLHKGHANPDSHV*LAAHYL
Trigger: TAAGTAATGAGCAGCAAGCCAGACGTGACTGTCAGG...ATTAGCATGGCCCTTGTGCAAGGATGACATGCACATTTGTGAAGCGAAAGTAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR CCA 90 bp AGGAGACGTCGCTTTGAACGTGCTATAGGACCTTCTCAAACACACACCATCAGAATTCGACCTTCATATTaGGACTTTAGCGCAGTAATG +
Preference number: 4 (lower is better)
Translates to: RRRRFERAIGPSQTHTIRIRPSY*DFSAVM
Trigger: CATTACTGCGCTAAAGTCCCAATATGAAGGTCGAAT...TCTGATGGTGTGTGTTTGAGAAGGTCCTATAGCACGTTCAAAGCGACGTCTCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR CCA 90 bp TTTACTTTCGCTTCACAAATGTGCATGTCATCCTTGCACAAGGGCCATGCTAATTGTGCTTCCAAAAACTaGAACATGTTCCACAGGCCC +
Preference number: 4 (lower is better)
Translates to: FTFASQMCMSSLHKGHANCASKN*NMFHRP
Trigger: GGGCCTGTGGAACATGTTCCAGTTTTTGGAAGCACA...ATTAGCATGGCCCTTGTGCAAGGATGACATGCACATTTGTGAAGCGAAAGTAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR CCA 90 bp TTTACTTTCGCTTCACAAATGTGCATGTCATCCTTGCACAAGGGCCATGCTAATTTCACGTGTACGCTTTaGCAAAGAAGAACTGGGGGT +
Preference number: 4 (lower is better)
Translates to: FTFASQMCMSSLHKGHANFTCTL*QRRTGG
Trigger: ACCCCCAGTTCTTCTTTGCCAAAGCGTACACGTGAA...ATTAGCATGGCCCTTGTGCAAGGATGACATGCACATTTGTGAAGCGAAAGTAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR CCA 90 bp TTTACTTTCGCTTCACAAATGTGCATGTCATCCTTGCACAAGGGCCATGCTAATTTCTGTTTCTGTACCTaGATCAGTCCCATCACCACC +
Preference number: 4 (lower is better)
Translates to: FTFASQMCMSSLHKGHANFCFCT*ISPITT
Trigger: GGTGGTGATGGGACTGATCCAGGTACAGAAACAGAA...ATTAGCATGGCCCTTGTGCAAGGATGACATGCACATTTGTGAAGCGAAAGTAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR CCA 90 bp CTATATCACTGCCCAACATCAGAAAACCTGACGGCTATGATTACTATGCCTTTTCTGAATTCTCTGAACTaGTGGTCCCAACTCCTGAGG +
Preference number: 4 (lower is better)
Translates to: LYHCPTSENLTAMITMPFLNSLN*WSQLLR
Trigger: CCTCAGGAGTTGGGACCACCAGTTCAGAGAATTCAG...AAAAGGCATAGTAATCATAGCCGTCAGGTTTTCTGATGTTGGGCAGTGATATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR CCA 90 bp AGGAGACGTCGCTTTGAACGTGCTATAGGACCTTCTCAAACACACACCATCAGAAAGAGTTGGAGTACTTaGAACTGTTCTGTCTTCATC +
Preference number: 4 (lower is better)
Translates to: RRRRFERAIGPSQTHTIRKSWST*NCSVFI
Trigger: GATGAAGACAGAACAGTTCCAAGTACTCCAACTCTT...TCTGATGGTGTGTGTTTGAGAAGGTCCTATAGCACGTTCAAAGCGACGTCTCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR CCA 90 bp AGGAGACGTCGCTTTGAACGTGCTATAGGACCTTCTCAAACACACACCATCAGAAATTACTACTCGTTCTaGGCAGACCTTATCCAAAGT +
Preference number: 4 (lower is better)
Translates to: RRRRFERAIGPSQTHTIRNYYSF*ADLIQS
Trigger: ACTTTGGATAAGGTCTGCCCAGAACGAGTAGTAATT...TCTGATGGTGTGTGTTTGAGAAGGTCCTATAGCACGTTCAAAGCGACGTCTCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR TCA 90 bp TTTACTTTCGCTTCACAAATGTGCATGTCATCCTTGCACAAGGGCCATGCTAATCCTTCAGTTGATTGTTaGGTTTCTCTAGCTCAAGCC +
Preference number: 4 (lower is better)
Translates to: FTFASQMCMSSLHKGHANPSVDC*VSLAQA
Trigger: GGCTTGAGCTAGAGAAACTCAACAATCAACTGAAGG...ATTAGCATGGCCCTTGTGCAAGGATGACATGCACATTTGTGAAGCGAAAGTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR TCA 90 bp GTGGTTACCTCAGCTATATCACTGCCCAACATCAGAAAACCTGACGGCTATGATGCAATATTGCGATCCTaGGCAATTTCAAGTTCTTTG +
Preference number: 4 (lower is better)
Translates to: VVTSAISLPNIRKPDGYDAILRS*AISSSL
Trigger: CAAAGAACTTGAAATTGCTCAGGATCGCAATATTGC...ATCATAGCCGTCAGGTTTTCTGATGTTGGGCAGTGATATAGCTGAGGTAACCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR TCA 90 bp CTATATCACTGCCCAACATCAGAAAACCTGACGGCTATGATTACTATGCCTTTTATTGCTCTTTGCTTCTaGGTCATCAGCGGCACTCTT +
Preference number: 4 (lower is better)
Translates to: LYHCPTSENLTAMITMPFIALCF*VISGTL
Trigger: AAGAGTGCCGCTGATGACTCAGAAGCAAAGAGCAAT...AAAAGGCATAGTAATCATAGCCGTCAGGTTTTCTGATGTTGGGCAGTGATATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR TCA 90 bp AGGAGACGTCGCTTTGAACGTGCTATAGGACCTTCTCAAACACACACCATCAGAATTTCTTTTTCCATTTaGTCTTTGGATTGCTCCACC +
Preference number: 4 (lower is better)
Translates to: RRRRFERAIGPSQTHTIRISFSI*SLDCST
Trigger: GGTGGAGCAATCCAAAGATCAAATGGAAAAAGAAAT...TCTGATGGTGTGTGTTTGAGAAGGTCCTATAGCACGTTCAAAGCGACGTCTCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR TCA 90 bp AGGAGACGTCGCTTTGAACGTGCTATAGGACCTTCTCAAACACACACCATCAGACTCAGTGATTTTGGATaGAGTTGTTTCTTGTTCTTC +
Preference number: 4 (lower is better)
Translates to: RRRRFERAIGPSQTHTIRLSDFG*SCFLFF
Trigger: GAAGAACAAGAAACAACTTCATCCAAAATCACTGAG...TCTGATGGTGTGTGTTTGAGAAGGTCCTATAGCACGTTCAAAGCGACGTCTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR TCA 90 bp TTTACTTTCGCTTCACAAATGTGCATGTCATCCTTGCACAAGGGCCATGCTAATGGACTTCCATATTACTaGGGTGCTGTTTCAATGTGG +
Preference number: 4 (lower is better)
Translates to: FTFASQMCMSSLHKGHANGLPYY*GAVSMW
Trigger: CCACATTGAAACAGCACCTCAGTAATATGGAAGTCC...ATTAGCATGGCCCTTGTGCAAGGATGACATGCACATTTGTGAAGCGAAAGTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR TCA 90 bp ACAGGTGTCCTTCATAATGAAGTTAAAGTGAGTATACTGTGGAGAGGACTTCCAGTTCTCTGTGAAGACTaGGAAGCAACTTGGACTTCC +
Preference number: 4 (lower is better)
Translates to: TGVLHNEVKVSILWRGLPVLCED*EATWTS
Trigger: GGAAGTCCAAGTTGCTTCTCAGTCTTCACAGAGAAC...TGGAAGTCCTCTCCACAGTATACTCACTTTAACTTCATTATGAAGGACACCTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR TCA 90 bp CTATATCACTGCCCAACATCAGAAAACCTGACGGCTATGATTACTATGCCTTTTGCTGTGCTTGCTCTCTaGAGAGCTTCTTGTACTTCA +
Preference number: 4 (lower is better)
Translates to: LYHCPTSENLTAMITMPFAVLAL*RASCTS
Trigger: TGAAGTACAAGAAGCTCTTCAGAGAGCAAGCACAGC...AAAAGGCATAGTAATCATAGCCGTCAGGTTTTCTGATGTTGGGCAGTGATATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR TCA 90 bp CACTGCCCAACATCAGAAAACCTGACGGCTATGATTACTATGCCTTTTCTAAAGGTGCTTTCCAACGTTTaGCATCCTCTTCTAAGAGCT +
Preference number: 4 (lower is better)
Translates to: HCPTSENLTAMITMPFLKVLSNV*HPLLRA
Trigger: AGCTCTTAGAAGAGGATGTCAAACGTTGGAAAGCAC...CTTTAGAAAAGGCATAGTAATCATAGCCGTCAGGTTTTCTGATGTTGGGCAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR TCA 90 bp CCCTCAATAGTTCTACATCAGAGGGCTAAAACTGAGATTAAAACTCAGATGTCTCTGCATAGCTTCCTGTaGTTCCACTTGTGTAGTGGG +
Preference number: 4 (lower is better)
Translates to: PSIVLHQRAKTEIKTQMSLHSFL*FHLCSG
Trigger: CCCACTACACAAGTGGAATCACAGGAAGCTATGCAG...AGACATCTGAGTTTTAATCTCAGTTTTAGCCCTCTGATGTAGAACTATTGAGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR TCA 90 bp GTGGTTACCTCAGCTATATCACTGCCCAACATCAGAAAACCTGACGGCTATGATTCAACTGGTGAACTCTaGACAACCTCTACTATGTTT +
Preference number: 4 (lower is better)
Translates to: VVTSAISLPNIRKPDGYDSTGEL*TTSTMF
Trigger: AAACATAGTAGAGGTTGTTCAGAGTTCACCAGTTGA...ATCATAGCCGTCAGGTTTTCTGATGTTGGGCAGTGATATAGCTGAGGTAACCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR TCA 90 bp ACAGGTGTCCTTCATAATGAAGTTAAAGTGAGTATACTGTGGAGAGGACTTCCATCCTGGTTGTATACCTaGGTCTCTACCTCTCCATCA +
Preference number: 4 (lower is better)
Translates to: TGVLHNEVKVSILWRGLPSWLYT*VSTSPS
Trigger: TGATGGAGAGGTAGAGACTCAGGTATACAACCAGGA...TGGAAGTCCTCTCCACAGTATACTCACTTTAACTTCATTATGAAGGACACCTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR TCA 90 bp GTGGTTACCTCAGCTATATCACTGCCCAACATCAGAAAACCTGACGGCTATGATTCTATTTGTAGAGACTaGGAGGTTTCTTCACTGTCT +
Preference number: 4 (lower is better)
Translates to: VVTSAISLPNIRKPDGYDSICRD*EVSSLS
Trigger: AGACAGTGAAGAAACCTCTCAGTCTCTACAAATAGA...ATCATAGCCGTCAGGTTTTCTGATGTTGGGCAGTGATATAGCTGAGGTAACCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR TCA 90 bp ACAGGTGTCCTTCATAATGAAGTTAAAGTGAGTATACTGTGGAGAGGACTTCCATGGCCAAGATCAGAGTaGCTAGAACTTGTTTGTGGC +
Preference number: 4 (lower is better)
Translates to: TGVLHNEVKVSILWRGLPWPRSE*LELVCG
Trigger: GCCACAAACAAGTTCTAGTCACTCTGATCTTGGCCA...TGGAAGTCCTCTCCACAGTATACTCACTTTAACTTCATTATGAAGGACACCTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR TCA 90 bp CCCTCAATAGTTCTACATCAGAGGGCTAAAACTGAGATTAAAACTCAGATGTCTCCTGACTCTTCTTCATaGGCTAGGAACAGGGGTGTT +
Preference number: 4 (lower is better)
Translates to: PSIVLHQRAKTEIKTQMSPDSSS*ARNRGV
Trigger: AACACCCCTGTTCCTAGCTCATGAAGAAGAGTCAGG...AGACATCTGAGTTTTAATCTCAGTTTTAGCCCTCTGATGTAGAACTATTGAGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR TCA 90 bp TTTACTTTCGCTTCACAAATGTGCATGTCATCCTTGCACAAGGGCCATGCTAATGAAGTCTTACTCGTCTaGAAGGCTTTGGTTGACTAC +
Preference number: 4 (lower is better)
Translates to: FTFASQMCMSSLHKGHANEVLLV*KALVDY
Trigger: GTAGTCAACCAAAGCCTTTCAGACGAGTAAGACTTC...ATTAGCATGGCCCTTGTGCAAGGATGACATGCACATTTGTGAAGCGAAAGTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR GCA 90 bp CCCTCAATAGTTCTACATCAGAGGGCTAAAACTGAGATTAAAACTCAGATGTCTACCTTAAATTTCTCATaGCGCCCCTTCAGGCCATCG +
Preference number: 4 (lower is better)
Translates to: PSIVLHQRAKTEIKTQMSTLNFS*RPFRPS
Trigger: CGATGGCCTGAAGGGGCGGCATGAGAAATTTAAGGT...AGACATCTGAGTTTTAATCTCAGTTTTAGCCCTCTGATGTAGAACTATTGAGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR GCA 90 bp GTGGTTACCTCAGCTATATCACTGCCCAACATCAGAAAACCTGACGGCTATGATAGCAATTCCTTTTCTTaGTCCAAGCGTTTTTCTCGA +
Preference number: 4 (lower is better)
Translates to: VVTSAISLPNIRKPDGYDSNSFS*SKRFSR
Trigger: TCGAGAAAAACGCTTGGAGCAAGAAAAGGAATTGCT...ATCATAGCCGTCAGGTTTTCTGATGTTGGGCAGTGATATAGCTGAGGTAACCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR GCA 90 bp CACTGCCCAACATCAGAAAACCTGACGGCTATGATTACTATGCCTTTTCTAAAGCCCGGGTTAGTTCATTaGTCTTTGCTTCTGAGTCAT +
Preference number: 4 (lower is better)
Translates to: HCPTSENLTAMITMPFLKPGLVH*SLLLSH
Trigger: ATGACTCAGAAGCAAAGAGCAATGAACTAACCCGGG...CTTTAGAAAAGGCATAGTAATCATAGCCGTCAGGTTTTCTGATGTTGGGCAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR GCA 90 bp CTATATCACTGCCCAACATCAGAAAACCTGACGGCTATGATTACTATGCCTTTTTATCTTAGCTACAGCTaGTGCAGTAGGAGACATGGC +
Preference number: 4 (lower is better)
Translates to: LYHCPTSENLTAMITMPFYLSYS*CSRRHG
Trigger: GCCATGTCTCCTACTGCAGCAGCTGTAGCTAAGATA...AAAAGGCATAGTAATCATAGCCGTCAGGTTTTCTGATGTTGGGCAGTGATATAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR GCA 90 bp TTTACTTTCGCTTCACAAATGTGCATGTCATCCTTGCACAAGGGCCATGCTAATTCACGTCTGGCTTGCTaGTCATTACTTAAAGCTGTG +
Preference number: 4 (lower is better)
Translates to: FTFASQMCMSSLHKGHANSRLAC*SLLKAV
Trigger: CACAGCTTTAAGTAATGAGCAGCAAGCCAGACGTGA...ATTAGCATGGCCCTTGTGCAAGGATGACATGCACATTTGTGAAGCGAAAGTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR GCA 90 bp CTATATCACTGCCCAACATCAGAAAACCTGACGGCTATGATTACTATGCCTTTTGGGATTTGTAACAGTTaGAGGTGTAACCATTGGGCG +
Preference number: 4 (lower is better)
Translates to: LYHCPTSENLTAMITMPFGICNS*RCNHWA
Trigger: CGCCCAATGGTTACACCTGCAACTGTTACAAATCCC...AAAAGGCATAGTAATCATAGCCGTCAGGTTTTCTGATGTTGGGCAGTGATATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR GCA 90 bp TTTACTTTCGCTTCACAAATGTGCATGTCATCCTTGCACAAGGGCCATGCTAATCTGATGCTTCTATGGTaGTATCCTCTTCCTCTTCAC +
Preference number: 4 (lower is better)
Translates to: FTFASQMCMSSLHKGHANLMLLW*YPLPLH
Trigger: GTGAAGAGGAAGAGGATAGCACCATAGAAGCATCAG...ATTAGCATGGCCCTTGTGCAAGGATGACATGCACATTTGTGAAGCGAAAGTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR GCA 90 bp TTTACTTTCGCTTCACAAATGTGCATGTCATCCTTGCACAAGGGCCATGCTAATCCTCAGCTATATCACTaGCCAACATCAGAAAACCTG +
Preference number: 4 (lower is better)
Translates to: FTFASQMCMSSLHKGHANPQLYH*PTSENL
Trigger: CAGGTTTTCTGATGTTGGGCAGTGATATAGCTGAGG...ATTAGCATGGCCCTTGTGCAAGGATGACATGCACATTTGTGAAGCGAAAGTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR GCA 90 bp AGGAGACGTCGCTTTGAACGTGCTATAGGACCTTCTCAAACACACACCATCAGAAATTCAATATTCACCTaGCAGACTGGCTTATCAAGA +
Preference number: 4 (lower is better)
Translates to: RRRRFERAIGPSQTHTIRNSIFT*QTGLSR
Trigger: TCTTGATAAGCCAGTCTGGCAGGTGAATATTGAATT...TCTGATGGTGTGTGTTTGAGAAGGTCCTATAGCACGTTCAAAGCGACGTCTCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR CCA 90 bp TTTACTTTCGCTTCACAAATGTGCATGTCATCCTTGCACAAGGGCCATGCTAATTGCACAGTCTGTTCCTaGAGATTTCTTGCTTCTGTC +
Preference number: 4 (lower is better)
Translates to: FTFASQMCMSSLHKGHANCTVCS*RFLASV
Trigger: GACAGAAGCAAGAAATCTCCAGGAACAGACTGTGCA...ATTAGCATGGCCCTTGTGCAAGGATGACATGCACATTTGTGAAGCGAAAGTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR CCA 90 bp GTGGTTACCTCAGCTATATCACTGCCCAACATCAGAAAACCTGACGGCTATGATAAGATAACTCTTGATTaGCAGGCTCAATCTGAGGAT +
Preference number: 4 (lower is better)
Translates to: VVTSAISLPNIRKPDGYDKITLD*QAQSED
Trigger: ATCCTCAGATTGAGCCTGCCAATCAAGAGTTATCTT...ATCATAGCCGTCAGGTTTTCTGATGTTGGGCAGTGATATAGCTGAGGTAACCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR CCA 90 bp CCCTCAATAGTTCTACATCAGAGGGCTAAAACTGAGATTAAAACTCAGATGTCTAATTCTCTGAACTGGTaGTCCCAACTCCTGAGGTGG +
Preference number: 4 (lower is better)
Translates to: PSIVLHQRAKTEIKTQMSNSLNW*SQLLRW
Trigger: CCACCTCAGGAGTTGGGACCACCAGTTCAGAGAATT...AGACATCTGAGTTTTAATCTCAGTTTTAGCCCTCTGATGTAGAACTATTGAGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR CCA 90 bp CTATATCACTGCCCAACATCAGAAAACCTGACGGCTATGATTACTATGCCTTTTTCCATCAGTACGATGTaGCACCACAAGAGTTGGAGT +
Preference number: 4 (lower is better)
Translates to: LYHCPTSENLTAMITMPFSISTM*HHKSWS
Trigger: ACTCCAACTCTTGTGGTGCCACATCGTACTGATGGA...AAAAGGCATAGTAATCATAGCCGTCAGGTTTTCTGATGTTGGGCAGTGATATAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR CCA 90 bp AGGAGACGTCGCTTTGAACGTGCTATAGGACCTTCTCAAACACACACCATCAGAAAGGCTTATGAAATATaGATACTGATCAAACAGCCC +
Preference number: 4 (lower is better)
Translates to: RRRRFERAIGPSQTHTIRKAYEI*ILIKQP
Trigger: GGGCTGTTTGATCAGTATCCATATTTCATAAGCCTT...TCTGATGGTGTGTGTTTGAGAAGGTCCTATAGCACGTTCAAAGCGACGTCTCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR TCA 90 bp CACTGCCCAACATCAGAAAACCTGACGGCTATGATTACTATGCCTTTTCTAAAGGTTAGTGCCTTCAGTTaGTTGTTGAGTTTCTCTAGC +
Preference number: 4 (lower is better)
Translates to: HCPTSENLTAMITMPFLKVSAFS*LLSFSS
Trigger: GCTAGAGAAACTCAACAATCAACTGAAGGCACTAAC...CTTTAGAAAAGGCATAGTAATCATAGCCGTCAGGTTTTCTGATGTTGGGCAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR TCA 90 bp CACTGCCCAACATCAGAAAACCTGACGGCTATGATTACTATGCCTTTTCTAAAGCTTGTAAATTGGCTCTaGATGGCAATATTGCGATCC +
Preference number: 4 (lower is better)
Translates to: HCPTSENLTAMITMPFLKLVNWL*MAILRS
Trigger: GGATCGCAATATTGCCATTCAGAGCCAATTTACAAG...CTTTAGAAAAGGCATAGTAATCATAGCCGTCAGGTTTTCTGATGTTGGGCAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR TCA 90 bp GTGGTTACCTCAGCTATATCACTGCCCAACATCAGAAAACCTGACGGCTATGATTTCAGCCATGTATTCTaGCTATGTAGCAATTCCTTT +
Preference number: 4 (lower is better)
Translates to: VVTSAISLPNIRKPDGYDFSHVF*LCSNSF
Trigger: AAAGGAATTGCTACATAGTCAGAATACATGGCTGAA...ATCATAGCCGTCAGGTTTTCTGATGTTGGGCAGTGATATAGCTGAGGTAACCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR TCA 90 bp CTATATCACTGCCCAACATCAGAAAACCTGACGGCTATGATTACTATGCCTTTTCGGTACATATCACGCTaGCGAACTATGGAATCAACA +
Preference number: 4 (lower is better)
Translates to: LYHCPTSENLTAMITMPFRYISR*RTMEST
Trigger: TGTTGATTCCATAGTTCGTCAGCGTGATATGTACCG...AAAAGGCATAGTAATCATAGCCGTCAGGTTTTCTGATGTTGGGCAGTGATATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR TCA 90 bp TTTACTTTCGCTTCACAAATGTGCATGTCATCCTTGCACAAGGGCCATGCTAATTGGACGTTTTGGAGTTaGTGCAAGAGAAACATCATC +
Preference number: 4 (lower is better)
Translates to: FTFASQMCMSSLHKGHANWTFWS*CKRNII
Trigger: GATGATGTTTCTCTTGCATCAACTCCAAAACGTCCA...ATTAGCATGGCCCTTGTGCAAGGATGACATGCACATTTGTGAAGCGAAAGTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR TCA 90 bp ACAGGTGTCCTTCATAATGAAGTTAAAGTGAGTATACTGTGGAGAGGACTTCCAAGTGGAAACAGTCTGTaGTGTACTTGGACGTTTTGG +
Preference number: 4 (lower is better)
Translates to: TGVLHNEVKVSILWRGLPSGNSL*CTWTFW
Trigger: CCAAAACGTCCAAGTACATCACAGACTGTTTCCACT...TGGAAGTCCTCTCCACAGTATACTCACTTTAACTTCATTATGAAGGACACCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR TCA 90 bp TTTACTTTCGCTTCACAAATGTGCATGTCATCCTTGCACAAGGGCCATGCTAATAAAGACTCTCTTTGCTaGGAAAGACGAACTTCAGAC +
Preference number: 4 (lower is better)
Translates to: FTFASQMCMSSLHKGHANKDSLC*ERRTSD
Trigger: GTCTGAAGTTCGTCTTTCTCAGCAAAGAGAGTCTTT...ATTAGCATGGCCCTTGTGCAAGGATGACATGCACATTTGTGAAGCGAAAGTAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR TCA 90 bp CCCTCAATAGTTCTACATCAGAGGGCTAAAACTGAGATTAAAACTCAGATGTCTATTTTAGCTTGTTCCTaGCAGTCACGTCTGGCTTGC +
Preference number: 4 (lower is better)
Translates to: PSIVLHQRAKTEIKTQMSILACS*QSRLAC
Trigger: GCAAGCCAGACGTGACTGTCAGGAACAAGCTAAAAT...AGACATCTGAGTTTTAATCTCAGTTTTAGCCCTCTGATGTAGAACTATTGAGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR TCA 90 bp CACTGCCCAACATCAGAAAACCTGACGGCTATGATTACTATGCCTTTTCTAAAGACACTCCAACAACTGTaGTTCTGCTTTCTGTGTTGT +
Preference number: 4 (lower is better)
Translates to: HCPTSENLTAMITMPFLKTLQQL*FCFLCC
Trigger: ACAACACAGAAAGCAGAATCACAGTTGTTGGAGTGT...CTTTAGAAAAGGCATAGTAATCATAGCCGTCAGGTTTTCTGATGTTGGGCAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR TCA 90 bp CTATATCACTGCCCAACATCAGAAAACCTGACGGCTATGATTACTATGCCTTTTATCAGAGACTTGGTCTaGTGCTTCTATGGTGCTATC +
Preference number: 4 (lower is better)
Translates to: LYHCPTSENLTAMITMPFIRDLV*CFYGAI
Trigger: GATAGCACCATAGAAGCATCAGACCAAGTCTCTGAT...AAAAGGCATAGTAATCATAGCCGTCAGGTTTTCTGATGTTGGGCAGTGATATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR TCA 90 bp CACTGCCCAACATCAGAAAACCTGACGGCTATGATTACTATGCCTTTTCTAAAGTCTCCAATGGAATCTTaGGAATCCTGGTTGTATACC +
Preference number: 4 (lower is better)
Translates to: HCPTSENLTAMITMPFLKSPMES*ESWLYT
Trigger: GGTATACAACCAGGATTCTCAAGATTCCATTGGAGA...CTTTAGAAAAGGCATAGTAATCATAGCCGTCAGGTTTTCTGATGTTGGGCAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR GCA 90 bp CACTGCCCAACATCAGAAAACCTGACGGCTATGATTACTATGCCTTTTCTAAAGGCATTTAGACTATCTTaGAGTTCCTGCAGCTCTCTT +
Preference number: 4 (lower is better)
Translates to: HCPTSENLTAMITMPFLKAFRLS*SSCSSL
Trigger: AAGAGAGCTGCAGGAACTGCAAGATAGTCTAAATGC...CTTTAGAAAAGGCATAGTAATCATAGCCGTCAGGTTTTCTGATGTTGGGCAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR GCA 90 bp CTATATCACTGCCCAACATCAGAAAACCTGACGGCTATGATTACTATGCCTTTTAGCTTCTTCTCTGCCTaGAACATACCGCTTTTCTCA +
Preference number: 4 (lower is better)
Translates to: LYHCPTSENLTAMITMPFSFFSA*NIPLFS
Trigger: TGAGAAAAGCGGTATGTTGCAGGCAGAGAAGAAGCT...AAAAGGCATAGTAATCATAGCCGTCAGGTTTTCTGATGTTGGGCAGTGATATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR GCA 90 bp CTATATCACTGCCCAACATCAGAAAACCTGACGGCTATGATTACTATGCCTTTTATTTCCAGCCATAGCTaGAGCTGTCACTTTACTTGG +
Preference number: 4 (lower is better)
Translates to: LYHCPTSENLTAMITMPFISSHS*SCHFTW
Trigger: CCAAGTAAAGTGACAGCTGCAGCTATGGCTGGAAAT...AAAAGGCATAGTAATCATAGCCGTCAGGTTTTCTGATGTTGGGCAGTGATATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR CCA 90 bp ACAGGTGTCCTTCATAATGAAGTTAAAGTGAGTATACTGTGGAGAGGACTTCCAATTTCTCTTCCATACTaGCCTGTTGTTCCTTGGCCT +
Preference number: 4 (lower is better)
Translates to: TGVLHNEVKVSILWRGLPISLPY*PVVPWP
Trigger: AGGCCAAGGAACAACAGGCCAGTATGGAAGAGAAAT...TGGAAGTCCTCTCCACAGTATACTCACTTTAACTTCATTATGAAGGACACCTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR CCA 90 bp TTTACTTTCGCTTCACAAATGTGCATGTCATCCTTGCACAAGGGCCATGCTAATTCATCACGAATTACGTaGTTACCCCTTGCTTCTTCA +
Preference number: 4 (lower is better)
Translates to: FTFASQMCMSSLHKGHANSSRIT*LPLASS
Trigger: TGAAGAAGCAAGGGGTAACCACGTAATTCGTGATGA...ATTAGCATGGCCCTTGTGCAAGGATGACATGCACATTTGTGAAGCGAAAGTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR CCA 90 bp CCCTCAATAGTTCTACATCAGAGGGCTAAAACTGAGATTAAAACTCAGATGTCTGTACTGGAGCAGGAGTaGAAACAGTCTGTGATGTAC +
Preference number: 4 (lower is better)
Translates to: PSIVLHQRAKTEIKTQMSVLEQE*KQSVMY
Trigger: GTACATCACAGACTGTTTCCACTCCTGCTCCAGTAC...AGACATCTGAGTTTTAATCTCAGTTTTAGCCCTCTGATGTAGAACTATTGAGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR CCA 90 bp CACTGCCCAACATCAGAAAACCTGACGGCTATGATTACTATGCCTTTTCTAAAGTTCAATAACAGGTACTaGAGCAGGAGTGGAAACAGT +
Preference number: 4 (lower is better)
Translates to: HCPTSENLTAMITMPFLKFNNRY*SRSGNS
Trigger: ACTGTTTCCACTCCTGCTCCAGTACCTGTTATTGAA...CTTTAGAAAAGGCATAGTAATCATAGCCGTCAGGTTTTCTGATGTTGGGCAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR CCA 90 bp CACTGCCCAACATCAGAAAACCTGACGGCTATGATTACTATGCCTTTTCTAAAGGAGAGATACATTCAGTaGACCTTGTACACCTTCCTT +
Preference number: 4 (lower is better)
Translates to: HCPTSENLTAMITMPFLKERYIQ*TLYTFL
Trigger: AAGGAAGGTGTACAAGGTCCACTGAATGTATCTCTC...CTTTAGAAAAGGCATAGTAATCATAGCCGTCAGGTTTTCTGATGTTGGGCAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR CCA 90 bp CACTGCCCAACATCAGAAAACCTGACGGCTATGATTACTATGCCTTTTCTAAAGGTTTTTGCAGTTACCTaGACTTTCTCCCTTTCAGCA +
Preference number: 4 (lower is better)
Translates to: HCPTSENLTAMITMPFLKVFAVT*TFSLSA
Trigger: TGCTGAAAGGGAGAAAGTCCAGGTAACTGCAAAAAC...CTTTAGAAAAGGCATAGTAATCATAGCCGTCAGGTTTTCTGATGTTGGGCAGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR CCA 90 bp CTATATCACTGCCCAACATCAGAAAACCTGACGGCTATGATTACTATGCCTTTTCATCACTGTAGCTGTTaGGGTAGTAGTGGGATTTGT +
Preference number: 4 (lower is better)
Translates to: LYHCPTSENLTAMITMPFHHCSC*GSSGIC
Trigger: ACAAATCCCACTACTACCCCAACAGCTACAGTGATG...AAAAGGCATAGTAATCATAGCCGTCAGGTTTTCTGATGTTGGGCAGTGATATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR CCA 90 bp ACAGGTGTCCTTCATAATGAAGTTAAAGTGAGTATACTGTGGAGAGGACTTCCAACTAGAACTTGTTTGTaGCATATCTTCAGGTGGCCC +
Preference number: 4 (lower is better)
Translates to: TGVLHNEVKVSILWRGLPTRTCL*HIFRWP
Trigger: GGGCCACCTGAAGATATGCCACAAACAAGTTCTAGT...TGGAAGTCCTCTCCACAGTATACTCACTTTAACTTCATTATGAAGGACACCTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367478.9
3UTR CAA 72 bp TCATTTACTTTCGCTTCACAAATGTGCATGTCATCCTaGCACAAGGGCCATGCTAATCTCTGTATCATTCCA +
Preference number: 4 (lower is better)
Translates to: SFTFASQMCMSS*HKGHANLCIIP
Trigger: TGGAATGATACAGAGATTAGCATGGCCCTTGTGCAAGGATGACATGCACATTTGTGAAGCGAAAGTAAATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR TCA 90 bp CACTGCCCAACATCAGAAAACCTGACGGCTATGATTACTATGCCTTTTCTAAAGTTTGAGTTGTGGCAGTaGGTTTCTGATTTCTCTCAT +
Preference number: 4 (lower is better)
Translates to: HCPTSENLTAMITMPFLKFELWQ*VSDFSH
Trigger: ATGAGAGAAATCAGAAACTCACTGCCACAACTCAAA...CTTTAGAAAAGGCATAGTAATCATAGCCGTCAGGTTTTCTGATGTTGGGCAGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR TCA 90 bp CCCTCAATAGTTCTACATCAGAGGGCTAAAACTGAGATTAAAACTCAGATGTCTTCTGTCTGTCTTAGCTaGCTCACAAGATCATCCACA +
Preference number: 4 (lower is better)
Translates to: PSIVLHQRAKTEIKTQMSSVCLS*LTRSST
Trigger: TGTGGATGATCTTGTGAGTCAGCTAAGACAGACAGA...AGACATCTGAGTTTTAATCTCAGTTTTAGCCCTCTGATGTAGAACTATTGAGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR TCA 90 bp CACTGCCCAACATCAGAAAACCTGACGGCTATGATTACTATGCCTTTTCTAAAGATTTTCCTTCTTCACTaGGAGATACATTCAGTGGAC +
Preference number: 4 (lower is better)
Translates to: HCPTSENLTAMITMPFLKIFLLH*EIHSVD
Trigger: GTCCACTGAATGTATCTCTCAGTGAAGAAGGAAAAT...CTTTAGAAAAGGCATAGTAATCATAGCCGTCAGGTTTTCTGATGTTGGGCAGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR TCA 90 bp CCCTCAATAGTTCTACATCAGAGGGCTAAAACTGAGATTAAAACTCAGATGTCTATCCTGACGAAGTCGTaGAAGTTCAGACTGAAGTTG +
Preference number: 4 (lower is better)
Translates to: PSIVLHQRAKTEIKTQMSILTKS*KFRLKL
Trigger: CAACTTCAGTCTGAACTTTCACGACTTCGTCAGGAT...AGACATCTGAGTTTTAATCTCAGTTTTAGCCCTCTGATGTAGAACTATTGAGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR TCA 90 bp CCCTCAATAGTTCTACATCAGAGGGCTAAAACTGAGATTAAAACTCAGATGTCTACTAGTATCTACAGATaGGCTAGAAGGAGGATCCTG +
Preference number: 4 (lower is better)
Translates to: PSIVLHQRAKTEIKTQMSTSIYR*ARRRIL
Trigger: CAGGATCCTCCTTCTAGCTCATCTGTAGATACTAGT...AGACATCTGAGTTTTAATCTCAGTTTTAGCCCTCTGATGTAGAACTATTGAGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR TCA 90 bp CACTGCCCAACATCAGAAAACCTGACGGCTATGATTACTATGCCTTTTCTAAAGTGTCTCAATGTTGTCTaGAGTCTTACTCGTCTGAAA +
Preference number: 4 (lower is better)
Translates to: HCPTSENLTAMITMPFLKCLNVV*SLTRLK
Trigger: TTTCAGACGAGTAAGACTTCAGACAACATTGAGACA...CTTTAGAAAAGGCATAGTAATCATAGCCGTCAGGTTTTCTGATGTTGGGCAGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR TCA 90 bp CTATATCACTGCCCAACATCAGAAAACCTGACGGCTATGATTACTATGCCTTTTTATGTGCTGCCAAACTaGGCACTTGTCACTTTCAAT +
Preference number: 4 (lower is better)
Translates to: LYHCPTSENLTAMITMPFYVLPN*ALVTFN
Trigger: ATTGAAAGTGACAAGTGCTCAGTTTGGCAGCACATA...AAAAGGCATAGTAATCATAGCCGTCAGGTTTTCTGATGTTGGGCAGTGATATAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR GCA 90 bp CCCTCAATAGTTCTACATCAGAGGGCTAAAACTGAGATTAAAACTCAGATGTCTGATGCTGTCGTGATTTaGGGAGTTGTTCTAGTTCAG +
Preference number: 4 (lower is better)
Translates to: PSIVLHQRAKTEIKTQMSDAVVI*GVVLVQ
Trigger: CTGAACTAGAACAACTCCGCAAATCACGACAGCATC...AGACATCTGAGTTTTAATCTCAGTTTTAGCCCTCTGATGTAGAACTATTGAGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR GCA 90 bp CTATATCACTGCCCAACATCAGAAAACCTGACGGCTATGATTACTATGCCTTTTGTTAGCAGTAAGTTTTaGCCCCTTTGTTCAGCTAAC +
Preference number: 4 (lower is better)
Translates to: LYHCPTSENLTAMITMPFVSSKF*PLCSAN
Trigger: GTTAGCTGAACAAAGGGGGCAAAACTTACTGCTAAC...AAAAGGCATAGTAATCATAGCCGTCAGGTTTTCTGATGTTGGGCAGTGATATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR GCA 90 bp CCCTCAATAGTTCTACATCAGAGGGCTAAAACTGAGATTAAAACTCAGATGTCTCAGTCACGTCTGGCTTaGTGCTCATTACTTAAAGCT +
Preference number: 4 (lower is better)
Translates to: PSIVLHQRAKTEIKTQMSQSRLA*CSLLKA
Trigger: AGCTTTAAGTAATGAGCAGCAAGCCAGACGTGACTG...AGACATCTGAGTTTTAATCTCAGTTTTAGCCCTCTGATGTAGAACTATTGAGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR GCA 90 bp CCCTCAATAGTTCTACATCAGAGGGCTAAAACTGAGATTAAAACTCAGATGTCTGCCATTTTTGAAACCTaGTCCTTCGCAGCTTGTAGA +
Preference number: 4 (lower is better)
Translates to: PSIVLHQRAKTEIKTQMSAIFET*SFAACR
Trigger: TCTACAAGCTGCGAAGGAGCAGGTTTCAAAAATGGC...AGACATCTGAGTTTTAATCTCAGTTTTAGCCCTCTGATGTAGAACTATTGAGGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR GCA 90 bp CACTGCCCAACATCAGAAAACCTGACGGCTATGATTACTATGCCTTTTCTAAAGAATGTGATCTGTCTCTaGTGTTCAGGGACCTTATTA +
Preference number: 4 (lower is better)
Translates to: HCPTSENLTAMITMPFLKNVICL*CSGTLL
Trigger: TAATAAGGTCCCTGAACAGCAGAGACAGATCACATT...CTTTAGAAAAGGCATAGTAATCATAGCCGTCAGGTTTTCTGATGTTGGGCAGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR CCA 90 bp CCCTCAATAGTTCTACATCAGAGGGCTAAAACTGAGATTAAAACTCAGATGTCTCTGGCGTTTCAAAATTaGTGCTTTGGCTTCCACTTC +
Preference number: 4 (lower is better)
Translates to: PSIVLHQRAKTEIKTQMSLAFQN*CFGFHF
Trigger: GAAGTGGAAGCCAAAGCACCAATTTTGAAACGCCAG...AGACATCTGAGTTTTAATCTCAGTTTTAGCCCTCTGATGTAGAACTATTGAGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR CCA 90 bp CACTGCCCAACATCAGAAAACCTGACGGCTATGATTACTATGCCTTTTCTAAAGAAGCATGTAATGGAATaGCAACTCCTGTTGTTTGTG +
Preference number: 4 (lower is better)
Translates to: HCPTSENLTAMITMPFLKKHVME*QLLLFV
Trigger: CACAAACAACAGGAGTTGCCATTCCATTACATGCTT...CTTTAGAAAAGGCATAGTAATCATAGCCGTCAGGTTTTCTGATGTTGGGCAGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR CCA 90 bp CTATATCACTGCCCAACATCAGAAAACCTGACGGCTATGATTACTATGCCTTTTAGCTGTCACTTTACTTaGAGTAGACACAACAGGAGT +
Preference number: 4 (lower is better)
Translates to: LYHCPTSENLTAMITMPFSCHFT*SRHNRS
Trigger: ACTCCTGTTGTGTCTACTCCAAGTAAAGTGACAGCT...AAAAGGCATAGTAATCATAGCCGTCAGGTTTTCTGATGTTGGGCAGTGATATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR CCA 90 bp CTATATCACTGCCCAACATCAGAAAACCTGACGGCTATGATTACTATGCCTTTTGAGGACTTCCAAATGTaGTTACCTCAGCTATATCAC +
Preference number: 4 (lower is better)
Translates to: LYHCPTSENLTAMITMPFEDFQM*LPQLYH
Trigger: GTGATATAGCTGAGGTAACCACATTTGGAAGTCCTC...AAAAGGCATAGTAATCATAGCCGTCAGGTTTTCTGATGTTGGGCAGTGATATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR CCA 90 bp TTTACTTTCGCTTCACAAATGTGCATGTCATCCTTGCACAAGGGCCATGCTAATAAAGTGAGTATACTGTaGAGAGGACTTCCAAATGTG +
Preference number: 4 (lower is better)
Translates to: FTFASQMCMSSLHKGHANKVSIL*RGLPNV
Trigger: CACATTTGGAAGTCCTCTCCACAGTATACTCACTTT...ATTAGCATGGCCCTTGTGCAAGGATGACATGCACATTTGTGAAGCGAAAGTAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR CCA 90 bp ACAGGTGTCCTTCATAATGAAGTTAAAGTGAGTATACTGTGGAGAGGACTTCCAATTCACCTGCCAGACTaGCTTATCAAGACAAAGGTA +
Preference number: 4 (lower is better)
Translates to: TGVLHNEVKVSILWRGLPIHLPD*LIKTKV
Trigger: TACCTTTGTCTTGATAAGCCAGTCTGGCAGGTGAAT...TGGAAGTCCTCTCCACAGTATACTCACTTTAACTTCATTATGAAGGACACCTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR TCA 90 bp CCCTCAATAGTTCTACATCAGAGGGCTAAAACTGAGATTAAAACTCAGATGTCTCTCTCAAGTTTGAGCTaGAGCTCAGTGATTTTGGAT +
Preference number: 4 (lower is better)
Translates to: PSIVLHQRAKTEIKTQMSLSSLS*SSVILD
Trigger: ATCCAAAATCACTGAGCTTCAGCTCAAACTTGAGAG...AGACATCTGAGTTTTAATCTCAGTTTTAGCCCTCTGATGTAGAACTATTGAGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR TCA 90 bp CTATATCACTGCCCAACATCAGAAAACCTGACGGCTATGATTACTATGCCTTTTTCTGTAACTTGTTCTTaGAGTTTCTCAAGCTGCTCA +
Preference number: 4 (lower is better)
Translates to: LYHCPTSENLTAMITMPFSVTCS*SFSSCS
Trigger: TGAGCAGCTTGAGAAACTTCAAGAACAAGTTACAGA...AAAAGGCATAGTAATCATAGCCGTCAGGTTTTCTGATGTTGGGCAGTGATATAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR TCA 90 bp CCCTCAATAGTTCTACATCAGAGGGCTAAAACTGAGATTAAAACTCAGATGTCTGTTTCTTCCAAATGCTaGCGGACTGATGCCATTTTT +
Preference number: 4 (lower is better)
Translates to: PSIVLHQRAKTEIKTQMSVSSKC*RTDAIF
Trigger: AAAAATGGCATCAGTCCGTCAGCATTTGGAAGAAAC...AGACATCTGAGTTTTAATCTCAGTTTTAGCCCTCTGATGTAGAACTATTGAGGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR TCA 90 bp CTATATCACTGCCCAACATCAGAAAACCTGACGGCTATGATTACTATGCCTTTTATCAGTTCTTCATGCTaGGCCATTGTTTTTGCAGTT +
Preference number: 4 (lower is better)
Translates to: LYHCPTSENLTAMITMPFISSSC*AIVFAV
Trigger: AACTGCAAAAACAATGGCTCAGCATGAAGAACTGAT...AAAAGGCATAGTAATCATAGCCGTCAGGTTTTCTGATGTTGGGCAGTGATATAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR TCA 90 bp ACAGGTGTCCTTCATAATGAAGTTAAAGTGAGTATACTGTGGAGAGGACTTCCAAATTCATCTTTCTGCTaGTCTAAGGCTCCATTCCTT +
Preference number: 4 (lower is better)
Translates to: TGVLHNEVKVSILWRGLPNSSFC*SKAPFL
Trigger: AAGGAATGGAGCCTTAGATCAGCAGAAAGATGAATT...TGGAAGTCCTCTCCACAGTATACTCACTTTAACTTCATTATGAAGGACACCTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR TCA 90 bp CTATATCACTGCCCAACATCAGAAAACCTGACGGCTATGATTACTATGCCTTTTCACTGTCAATTACAATaGCATCATCTCCTTTGCCTT +
Preference number: 4 (lower is better)
Translates to: LYHCPTSENLTAMITMPFHCQLQ*HHLLCL
Trigger: AAGGCAAAGGAGATGATGTCATTGTAATTGACAGTG...AAAAGGCATAGTAATCATAGCCGTCAGGTTTTCTGATGTTGGGCAGTGATATAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR GCA 90 bp ACAGGTGTCCTTCATAATGAAGTTAAAGTGAGTATACTGTGGAGAGGACTTCCAAAGATGATCTTGTATTaGTTTGTTGGCTTCACCAGC +
Preference number: 4 (lower is better)
Translates to: TGVLHNEVKVSILWRGLPKMILY*FVGFTS
Trigger: GCTGGTGAAGCCAACAAAGCAATACAAGATCATCTT...TGGAAGTCCTCTCCACAGTATACTCACTTTAACTTCATTATGAAGGACACCTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR GCA 90 bp TTTACTTTCGCTTCACAAATGTGCATGTCATCCTTGCACAAGGGCCATGCTAATTCAAGTACAGATGATTaGTTGTTGGCTTTATCAGTG +
Preference number: 4 (lower is better)
Translates to: FTFASQMCMSSLHKGHANSSTDD*LLALSV
Trigger: CACTGATAAAGCCAACAAGCAATCATCTGTACTTGA...ATTAGCATGGCCCTTGTGCAAGGATGACATGCACATTTGTGAAGCGAAAGTAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR GCA 90 bp CCCTCAATAGTTCTACATCAGAGGGCTAAAACTGAGATTAAAACTCAGATGTCTTACGTGGTTACCCCTTaGTTCTTCAAGTTCCATCAA +
Preference number: 4 (lower is better)
Translates to: PSIVLHQRAKTEIKTQMSYVVTP*FFKFHQ
Trigger: TTGATGGAACTTGAAGAAGCAAGGGGTAACCACGTA...AGACATCTGAGTTTTAATCTCAGTTTTAGCCCTCTGATGTAGAACTATTGAGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR GCA 90 bp CTATATCACTGCCCAACATCAGAAAACCTGACGGCTATGATTACTATGCCTTTTCTTCTTCAAATTTTCTaGTCTTACTTCTGCGACAGC +
Preference number: 4 (lower is better)
Translates to: LYHCPTSENLTAMITMPFLLQIF*SYFCDS
Trigger: GCTGTCGCAGAAGTAAGAGCAGAAAATTTGAAGAAG...AAAAGGCATAGTAATCATAGCCGTCAGGTTTTCTGATGTTGGGCAGTGATATAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR GCA 90 bp CCCTCAATAGTTCTACATCAGAGGGCTAAAACTGAGATTAAAACTCAGATGTCTGAACGGATCCACTTGTaGTTCCAAAAACTGGAACAT +
Preference number: 4 (lower is better)
Translates to: PSIVLHQRAKTEIKTQMSERIHL*FQKLEH
Trigger: ATGTTCCAGTTTTTGGAAGCACAAGTGGATCCGTTC...AGACATCTGAGTTTTAATCTCAGTTTTAGCCCTCTGATGTAGAACTATTGAGGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR GCA 90 bp CCCTCAATAGTTCTACATCAGAGGGCTAAAACTGAGATTAAAACTCAGATGTCTAAAAATGCTGTTGCATaGCACCTATTCCTGGAGTCA +
Preference number: 4 (lower is better)
Translates to: PSIVLHQRAKTEIKTQMSKNAVA*HLFLES
Trigger: TGACTCCAGGAATAGGTGGCATGCAACAGCATTTTT...AGACATCTGAGTTTTAATCTCAGTTTTAGCCCTCTGATGTAGAACTATTGAGGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR GCA 90 bp CACTGCCCAACATCAGAAAACCTGACGGCTATGATTACTATGCCTTTTCTAAAGACTATAACATTGATGTaGCTAGTAGAACAGCAAGAG +
Preference number: 4 (lower is better)
Translates to: HCPTSENLTAMITMPFLKTITLM*LVEQQE
Trigger: CTCTTGCTGTTCTACTAGGCACATCAATGTTATAGT...CTTTAGAAAAGGCATAGTAATCATAGCCGTCAGGTTTTCTGATGTTGGGCAGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR CCA 90 bp ACAGGTGTCCTTCATAATGAAGTTAAAGTGAGTATACTGTGGAGAGGACTTCCACTTGTATTGCTTTGTTaGCTTCACCAGCTTCTTTCA +
Preference number: 4 (lower is better)
Translates to: TGVLHNEVKVSILWRGLPLVLLC*LHQLLS
Trigger: TGAAAGAAGCTGGTGAAGCCAACAAAGCAATACAAG...TGGAAGTCCTCTCCACAGTATACTCACTTTAACTTCATTATGAAGGACACCTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR CCA 90 bp CTATATCACTGCCCAACATCAGAAAACCTGACGGCTATGATTACTATGCCTTTTCTCCTTTACGTTTTGTaGCAGAAAGAAGGTCATTTG +
Preference number: 4 (lower is better)
Translates to: LYHCPTSENLTAMITMPFLLYVL*QKEGHL
Trigger: CAAATGACCTTCTTTCTGCCACAAAACGTAAAGGAG...AAAAGGCATAGTAATCATAGCCGTCAGGTTTTCTGATGTTGGGCAGTGATATAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR CCA 90 bp CTATATCACTGCCCAACATCAGAAAACCTGACGGCTATGATTACTATGCCTTTTCTTCTTCAGACAATATaGCTCCTTTACGTTTTGTGG +
Preference number: 4 (lower is better)
Translates to: LYHCPTSENLTAMITMPFLLQTI*LLYVLW
Trigger: CCACAAAACGTAAAGGAGCCATATTGTCTGAAGAAG...AAAAGGCATAGTAATCATAGCCGTCAGGTTTTCTGATGTTGGGCAGTGATATAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR CCA 90 bp CACTGCCCAACATCAGAAAACCTGACGGCTATGATTACTATGCCTTTTCTAAAGGGTGCTGTTTCAATGTaGCAATTTCTTTTTGAGCAT +
Preference number: 4 (lower is better)
Translates to: HCPTSENLTAMITMPFLKGAVSM*QFLFEH
Trigger: ATGCTCAAAAAGAAATTGCCACATTGAAACAGCACC...CTTTAGAAAAGGCATAGTAATCATAGCCGTCAGGTTTTCTGATGTTGGGCAGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR CCA 90 bp ACAGGTGTCCTTCATAATGAAGTTAAAGTGAGTATACTGTGGAGAGGACTTCCATCGTCTGAAAGGCTTTaGTTGACTACTACTAGTATC +
Preference number: 4 (lower is better)
Translates to: TGVLHNEVKVSILWRGLPSSERL*LTTTSI
Trigger: GATACTAGTAGTAGTCAACCAAAGCCTTTCAGACGA...TGGAAGTCCTCTCCACAGTATACTCACTTTAACTTCATTATGAAGGACACCTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR CCA 90 bp TTTACTTTCGCTTCACAAATGTGCATGTCATCCTTGCACAAGGGCCATGCTAATCTAATACATAACAGGTaGCAGCATTCAGCAGTATAT +
Preference number: 4 (lower is better)
Translates to: FTFASQMCMSSLHKGHANLIHNR*QHSAVY
Trigger: ATATACTGCTGAATGCTGCCACCTGTTATGTATTAG...ATTAGCATGGCCCTTGTGCAAGGATGACATGCACATTTGTGAAGCGAAAGTAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR TCA 90 bp CCCTCAATAGTTCTACATCAGAGGGCTAAAACTGAGATTAAAACTCAGATGTCTCTAGTAACCATTGCTTaGTATTGTTCCACATTGCTC +
Preference number: 4 (lower is better)
Translates to: PSIVLHQRAKTEIKTQMSLVTIA*YCSTLL
Trigger: GAGCAATGTGGAACAATATCAAGCAATGGTTACTAG...AGACATCTGAGTTTTAATCTCAGTTTTAGCCCTCTGATGTAGAACTATTGAGGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR TCA 90 bp CCCTCAATAGTTCTACATCAGAGGGCTAAAACTGAGATTAAAACTCAGATGTCTTCTGGATCTTTCTGTTaGCTTACTAGATGCTGGTTA +
Preference number: 4 (lower is better)
Translates to: PSIVLHQRAKTEIKTQMSSGSFC*LTRCWL
Trigger: TAACCAGCATCTAGTAAGTCAACAGAAAGATCCAGA...AGACATCTGAGTTTTAATCTCAGTTTTAGCCCTCTGATGTAGAACTATTGAGGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR TCA 90 bp CTATATCACTGCCCAACATCAGAAAACCTGACGGCTATGATTACTATGCCTTTTTTAAGTTCTTCATATTaGGTCTTGTACCTACGTCCA +
Preference number: 4 (lower is better)
Translates to: LYHCPTSENLTAMITMPFLSSSY*VLYLRP
Trigger: TGGACGTAGGTACAAGACTCAATATGAAGAACTTAA...AAAAGGCATAGTAATCATAGCCGTCAGGTTTTCTGATGTTGGGCAGTGATATAG
39% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR TCA 90 bp CCCTCAATAGTTCTACATCAGAGGGCTAAAACTGAGATTAAAACTCAGATGTCTCTGAAAGGCTTTGGTTaGCTACTACTAGTATCTACA +
Preference number: 4 (lower is better)
Translates to: PSIVLHQRAKTEIKTQMSLKGFG*LLLVST
Trigger: TGTAGATACTAGTAGTAGTCAACCAAAGCCTTTCAG...AGACATCTGAGTTTTAATCTCAGTTTTAGCCCTCTGATGTAGAACTATTGAGGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR GCA 90 bp CCCTCAATAGTTCTACATCAGAGGGCTAAAACTGAGATTAAAACTCAGATGTCTTTCTCAAAAATTTCCTaGAACTGTTTAAGGGCAGCC +
Preference number: 4 (lower is better)
Translates to: PSIVLHQRAKTEIKTQMSFSKIS*NCLRAA
Trigger: GGCTGCCCTTAAACAGTTGCAGGAAATTTTTGAGAA...AGACATCTGAGTTTTAATCTCAGTTTTAGCCCTCTGATGTAGAACTATTGAGGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR GCA 90 bp ACAGGTGTCCTTCATAATGAAGTTAAAGTGAGTATACTGTGGAGAGGACTTCCATCCATATTACTGAGGTaGTGTTTCAATGTGGCAATT +
Preference number: 4 (lower is better)
Translates to: TGVLHNEVKVSILWRGLPSILLR*CFNVAI
Trigger: AATTGCCACATTGAAACAGCACCTCAGTAATATGGA...TGGAAGTCCTCTCCACAGTATACTCACTTTAACTTCATTATGAAGGACACCTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR GCA 90 bp ACAGGTGTCCTTCATAATGAAGTTAAAGTGAGTATACTGTGGAGAGGACTTCCAAGAAAAAGAAGATTCTaGAGCACCTGTATTTCCTTC +
Preference number: 4 (lower is better)
Translates to: TGVLHNEVKVSILWRGLPRKRRF*STCISF
Trigger: GAAGGAAATACAGGTGCTGCAGAATCTTCTTTTTCT...TGGAAGTCCTCTCCACAGTATACTCACTTTAACTTCATTATGAAGGACACCTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR GCA 90 bp ACAGGTGTCCTTCATAATGAAGTTAAAGTGAGTATACTGTGGAGAGGACTTCCATCCATCATCACCTGTTaGTGTTTCATTTGTTGTAGA +
Preference number: 4 (lower is better)
Translates to: TGVLHNEVKVSILWRGLPSIITC*CFICCR
Trigger: TCTACAACAAATGAAACAGCAACAGGTGATGATGGA...TGGAAGTCCTCTCCACAGTATACTCACTTTAACTTCATTATGAAGGACACCTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR CCA 90 bp CACTGCCCAACATCAGAAAACCTGACGGCTATGATTACTATGCCTTTTCTAAAGGGATATCAATTATTTTaGCATCTAAGTCCTTCTGGA +
Preference number: 4 (lower is better)
Translates to: HCPTSENLTAMITMPFLKGYQLF*HLSPSG
Trigger: TCCAGAAGGACTTAGATGCCAAAATAATTGATATCC...CTTTAGAAAAGGCATAGTAATCATAGCCGTCAGGTTTTCTGATGTTGGGCAGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR TCA 90 bp CCCTCAATAGTTCTACATCAGAGGGCTAAAACTGAGATTAAAACTCAGATGTCTTCTTCCTTCAGACTCTaGATTAAGTTCTGGTTGTTA +
Preference number: 4 (lower is better)
Translates to: PSIVLHQRAKTEIKTQMSSSFRL*IKFWLL
Trigger: TAACAACCAGAACTTAATTCAGAGTCTGAAGGAAGA...AGACATCTGAGTTTTAATCTCAGTTTTAGCCCTCTGATGTAGAACTATTGAGGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR GCA 90 bp CTATATCACTGCCCAACATCAGAAAACCTGACGGCTATGATTACTATGCCTTTTTTTCTAGTAAGTGTATaGCTTTGTTCCACCTCATTT +
Preference number: 4 (lower is better)
Translates to: LYHCPTSENLTAMITMPFFLVSV*LCSTSF
Trigger: AAATGAGGTGGAACAAAGGCATACACTTACTAGAAA...AAAAGGCATAGTAATCATAGCCGTCAGGTTTTCTGATGTTGGGCAGTGATATAG
38% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR CCA 90 bp CCCTCAATAGTTCTACATCAGAGGGCTAAAACTGAGATTAAAACTCAGATGTCTTTTCCATTTGATCTTTaGATTGCTCCACCTCTAGAA +
Preference number: 4 (lower is better)
Translates to: PSIVLHQRAKTEIKTQMSFPFDL*IAPPLE
Trigger: TTCTAGAGGTGGAGCAATCCAAAGATCAAATGGAAA...AGACATCTGAGTTTTAATCTCAGTTTTAGCCCTCTGATGTAGAACTATTGAGGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR CCA 90 bp CCCTCAATAGTTCTACATCAGAGGGCTAAAACTGAGATTAAAACTCAGATGTCTTCCAGTTTTTCTATCTaGCTACTAAGCCTTTGTTTG +
Preference number: 4 (lower is better)
Translates to: PSIVLHQRAKTEIKTQMSSSFSI*LLSLCL
Trigger: CAAACAAAGGCTTAGTAGCCAGATAGAAAAACTGGA...AGACATCTGAGTTTTAATCTCAGTTTTAGCCCTCTGATGTAGAACTATTGAGGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR CCA 90 bp CCCTCAATAGTTCTACATCAGAGGGCTAAAACTGAGATTAAAACTCAGATGTCTGATTTTGTTTCAGCTTaGTTGAGCGTTTCTTTGAGT +
Preference number: 4 (lower is better)
Translates to: PSIVLHQRAKTEIKTQMSDFVSA*LSVSLS
Trigger: ACTCAAAGAAACGCTCAACCAAGCTGAAACAAAATC...AGACATCTGAGTTTTAATCTCAGTTTTAGCCCTCTGATGTAGAACTATTGAGGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR CCA 90 bp CCCTCAATAGTTCTACATCAGAGGGCTAAAACTGAGATTAAAACTCAGATGTCTAGCGACATACACATTTaGAAACTTCATCCTTTAACA +
Preference number: 4 (lower is better)
Translates to: PSIVLHQRAKTEIKTQMSSDIHI*KLHPLT
Trigger: TGTTAAAGGATGAAGTTTCCAAATGTGTATGTCGCT...AGACATCTGAGTTTTAATCTCAGTTTTAGCCCTCTGATGTAGAACTATTGAGGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS CCA 90 bp GTAGAAGCGGAGAAGAAAGGCGAAGACCAGCAGGACCCAGACGCCTaGGCCGCCGCCTCTATCACCTCGCTCGGTGGCTCGCGCGCGCCC +
Preference number: 5 (lower is better)
Translates to: VEAEKKGEDQQDPDA*AAASITSLGGSRAP
Trigger: GGGCGCGCGCGAGCCACCGAGCGAGGTGATAGAGGCGGCGGCCCAGGCGTCTGGGTCCTGCTGGTCTTCGCCTTTCTTCTCCGCTTCTAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367478.9
ENST00000451586.1
ENST00000474852.1
ENST00000613151.1
CDS GCA 90 bp AGCGGCAGCGTTTCAGCAACAGCACCTCACCGCCCGCGACCGAAGTaGGCGCGCAGCCGTTGGAAGCTACGAACCCTGGGAACCCGAGCT +
Preference number: 5 (lower is better)
Translates to: SGSVSATAPHRPRPK*ARSRWKLRTLGTRA
Trigger: AGCTCGGGTTCCCAGGGTTCGTAGCTTCCAACGGCTGCGCGCGCACTTCGGTCGCGGGCGGTGAGGTGCTGTTGCTGAAACGCTGCCGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474852.1
ENST00000613151.1
CDS CCA 90 bp CGGCGGGACCCGTCAAAGCCCCGGGATGCCATGGATCGTCCTCGTTaGCGGCTTCTGGACACTGAGCCACTAGAGGGCATCGGTCCCGGT +
Preference number: 5 (lower is better)
Translates to: RRDPSKPRDAMDRPR*RLLDTEPLEGIGPG
Trigger: ACCGGGACCGATGCCCTCTAGTGGCTCAGTGTCCAGAAGCCGCCAACGAGGACGATCCATGGCATCCCGGGGCTTTGACGGGTCCCGCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451586.1
CDS CCA 90 bp GCAACAGCACCTCACCGCCCGCGACCGAAGTGCGCGCGCAGCCGTTaGAAGCTACGAACCCTGGGAACCCGAGCTCAGAGGCTATCCCTG +
Preference number: 5 (lower is better)
Translates to: ATAPHRPRPKCARSR*KLRTLGTRAQRLSL
Trigger: CAGGGATAGCCTCTGAGCTCGGGTTCCCAGGGTTCGTAGCTTCCAACGGCTGCGCGCGCACTTCGGTCGCGGGCGGTGAGGTGCTGTTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474852.1
ENST00000613151.1
CDS GCA 90 bp ACAGACTTGGGCAGCTTGTTCAGCTCCGTGCGCTCCAGGACTTGCTaGAACACCGCCGCCATGTCGGTGGGGCCAGGGACCCCAGTGGCA +
Preference number: 5 (lower is better)
Translates to: TDLGSLFSSVRSRTC*NTAAMSVGPGTPVA
Trigger: TGCCACTGGGGTCCCTGGCCCCACCGACATGGCGGCGGTGTTGCAGCAAGTCCTGGAGCGCACGGAGCTGAACAAGCTGCCCAAGTCTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000367478.9
ENST00000451586.1
ENST00000474852.1
ENST00000613151.1
CDS GCA 90 bp TGGACAGACTTGGGCAGCTTGTTCAGCTCCGTGCGCTCCAGGACTTaGTGCAACACCGCCGCCATGTCGGTGGGGCCAGGGACCCCAGTG +
Preference number: 5 (lower is better)
Translates to: WTDLGSLFSSVRSRT*CNTAAMSVGPGTPV
Trigger: CACTGGGGTCCCTGGCCCCACCGACATGGCGGCGGTGTTGCAGCAAGTCCTGGAGCGCACGGAGCTGAACAAGCTGCCCAAGTCTGTCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000367478.9
ENST00000451586.1
ENST00000474852.1
ENST00000613151.1
CDS TCA 90 bp ATGGTCAGTCTTGGGGGAAGTGGATGTGGTGGGCGTCTCGGTGACTaGGGTGCTCGAGGGGCCTGTCTTTCAGATGCTGATGATGGCTGT +
Preference number: 5 (lower is better)
Translates to: MVSLGGSGCGGRLGD*GARGACLSDADDGC
Trigger: ACAGCCATCATCAGCATCTGAAAGACAGGCCCCTCGAGCACCTCAGTCACCGAGACGCCCACCACATCCACTTCCCCCAAGACTGACCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS CCA 90 bp GAATTCTCTGAACTGGTGGTCCCAACTCCTGAGGTGGGGCATGAATaGTCAGTCTTGGGGGAAGTGGATGTGGTGGGCGTCTCGGTGACT +
Preference number: 5 (lower is better)
Translates to: EFSELVVPTPEVGHE*SVLGEVDVVGVSVT
Trigger: AGTCACCGAGACGCCCACCACATCCACTTCCCCCAAGACTGACCATTCATGCCCCACCTCAGGAGTTGGGACCACCAGTTCAGAGAATTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS CCA 90 bp TCGGGTCATCTGAATTCTCTGAACTGGTGGTCCCAACTCCTGAGGTaGGGCATGAATGGTCAGTCTTGGGGGAAGTGGATGTGGTGGGCG +
Preference number: 5 (lower is better)
Translates to: SGHLNSLNWWSQLLR*GMNGQSWGKWMWWA
Trigger: CGCCCACCACATCCACTTCCCCCAAGACTGACCATTCATGCCCCACCTCAGGAGTTGGGACCACCAGTTCAGAGAATTCAGATGACCCGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS TCA 90 bp GGAGGATCCTGGCTGGTGGAGGGGAGATCTGACTCATCAGATGCTTaGACCGGCTCTTCTTCCTGCTGGCTATCAATTTCTAGGCCTGCT +
Preference number: 5 (lower is better)
Translates to: GGSWLVEGRSDSSDA*TGSSSCWLSISRPA
Trigger: AGCAGGCCTAGAAATTGATAGCCAGCAGGAAGAAGAGCCGGTTCAAGCATCTGATGAGTCAGATCTCCCCTCCACCAGCCAGGATCCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS CCA 90 bp GCCAAGATCAGAGTGACTAGAACTTGTTTGTGGCATATCTTCAGGTaGCCCAAACCGGAATCTAGGGACACCAGCAACCTGCGGCGAATG +
Preference number: 5 (lower is better)
Translates to: AKIRVTRTCLWHIFR*PKPESRDTSNLRRM
Trigger: CATTCGCCGCAGGTTGCTGGTGTCCCTAGATTCCGGTTTGGGCCACCTGAAGATATGCCACAAACAAGTTCTAGTCACTCTGATCTTGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367478.9
ENST00000467810.1
CDS CCA 90 bp TTGAGAAGCAAGCTGGCCAAGATCAGAGTGACTAGAACTTGTTTGTaGCATATCTTCAGGTGGCCCAAACCGGAATCTAGGGACACCAGC +
Preference number: 5 (lower is better)
Translates to: LRSKLAKIRVTRTCL*HIFRWPKPESRDTS
Trigger: GCTGGTGTCCCTAGATTCCGGTTTGGGCCACCTGAAGATATGCCACAAACAAGTTCTAGTCACTCTGATCTTGGCCAGCTTGCTTCTCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367478.9
ENST00000467810.1
CDS-3UTR CAA 90 bp CCCTCAATAGTTCTACATCAGAGGGCTAAAACTGAGATTAAAACTCAGATGTCTCGTGCGCTCCAGGACTaGCTGCAACACCGCCGCCAT +
Preference number: 5 (lower is better)
Translates to: PSIVLHQRAKTEIKTQMSRALQD*LQHRRH
Trigger: ATGGCGGCGGTGTTGCAGCAAGTCCTGGAGCGCACG...AGACATCTGAGTTTTAATCTCAGTTTTAGCCCTCTGATGTAGAACTATTGAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR CAA 90 bp TTTACTTTCGCTTCACAAATGTGCATGTCATCCTTGCACAAGGGCCATGCTAATACAGACTTGGGCAGCTaGTTCAGCTCCGTGCGCTCC +
Preference number: 5 (lower is better)
Translates to: FTFASQMCMSSLHKGHANTDLGS*FSSVRS
Trigger: GGAGCGCACGGAGCTGAACAAGCTGCCCAAGTCTGT...ATTAGCATGGCCCTTGTGCAAGGATGACATGCACATTTGTGAAGCGAAAGTAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS TCA 90 bp AACAGTTGCAGGTGTAACCATTGGGCGGATACTAGCCCTGGGTGTTaGCTTATTTCCAGCCATAGCTGCAGCTGTCACTTTACTTGGAGT +
Preference number: 5 (lower is better)
Translates to: NSCRCNHWADTSPGC*LISSHSCSCHFTWS
Trigger: ACTCCAAGTAAAGTGACAGCTGCAGCTATGGCTGGAAATAAGTCAACACCCAGGGCTAGTATCCGCCCAATGGTTACACCTGCAACTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR CAA 90 bp AGGAGACGTCGCTTTGAACGTGCTATAGGACCTTCTCAAACACACACCATCAGACTCAAGCCGCAAGCTTaGACACTCTCGGGTTTCATT +
Preference number: 5 (lower is better)
Translates to: RRRRFERAIGPSQTHTIRLKPQA*TLSGFI
Trigger: AATGAAACCCGAGAGTGTCAAAGCTTGCGGCTTGAG...TCTGATGGTGTGTGTTTGAGAAGGTCCTATAGCACGTTCAAAGCGACGTCTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR CAA 90 bp AGGAGACGTCGCTTTGAACGTGCTATAGGACCTTCTCAAACACACACCATCAGAACGACCACGGACACCTaGTCTCAATGTTGTCTGAAG +
Preference number: 5 (lower is better)
Translates to: RRRRFERAIGPSQTHTIRTTTDT*SQCCLK
Trigger: CTTCAGACAACATTGAGACAAGGTGTCCGTGGTCGT...TCTGATGGTGTGTGTTTGAGAAGGTCCTATAGCACGTTCAAAGCGACGTCTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR CAA 90 bp GTGGTTACCTCAGCTATATCACTGCCCAACATCAGAAAACCTGACGGCTATGATGCCCGGGTTAGTTCATaGCTCTTTGCTTCTGAGTCA +
Preference number: 5 (lower is better)
Translates to: VVTSAISLPNIRKPDGYDARVSS*LFASES
Trigger: TGACTCAGAAGCAAAGAGCAATGAACTAACCCGGGC...ATCATAGCCGTCAGGTTTTCTGATGTTGGGCAGTGATATAGCTGAGGTAACCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS CCA 90 bp GAGGCATTTCCACTGTATCATCAGAGACTTGGTCTGATGCTTCTATaGTGCTATCCTCTTCCTCTTCACGTGTACGCTTTGGCAAAGAAG +
Preference number: 5 (lower is better)
Translates to: EAFPLYHQRLGLMLL*CYPLPLHVYALAKK
Trigger: CTTCTTTGCCAAAGCGTACACGTGAAGAGGAAGAGGATAGCACCATAGAAGCATCAGACCAAGTCTCTGATGATACAGTGGAAATGCCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS CCA 90 bp AACCTGCGGCGAATGAATTGCTTCAGCAAATCCATCAGTACGATGTaGCACCACAAGAGTTGGAGTACTTGGAACTGTTCTGTCTTCATC +
Preference number: 5 (lower is better)
Translates to: NLRRMNCFSKSISTM*HHKSWSTWNCSVFI
Trigger: GATGAAGACAGAACAGTTCCAAGTACTCCAACTCTTGTGGTGCCACATCGTACTGATGGATTTGCTGAAGCAATTCATTCGCCGCAGGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367478.9
ENST00000467810.1
CDS-3UTR CAA 90 bp TTTACTTTCGCTTCACAAATGTGCATGTCATCCTTGCACAAGGGCCATGCTAATTTGTTCTGGACAGACTaGGGCAGCTTGTTCAGCTCC +
Preference number: 5 (lower is better)
Translates to: FTFASQMCMSSLHKGHANLFWTD*GSLFSS
Trigger: GGAGCTGAACAAGCTGCCCAAGTCTGTCCAGAACAA...ATTAGCATGGCCCTTGTGCAAGGATGACATGCACATTTGTGAAGCGAAAGTAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR CAA 90 bp AGGAGACGTCGCTTTGAACGTGCTATAGGACCTTCTCAAACACACACCATCAGACTTCATGCTGAGCCATaGTTTTTGCAGTTACCTGGA +
Preference number: 5 (lower is better)
Translates to: RRRRFERAIGPSQTHTIRLHAEP*FLQLPG
Trigger: TCCAGGTAACTGCAAAAACAATGGCTCAGCATGAAG...TCTGATGGTGTGTGTTTGAGAAGGTCCTATAGCACGTTCAAAGCGACGTCTCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR CAA 90 bp TTTACTTTCGCTTCACAAATGTGCATGTCATCCTTGCACAAGGGCCATGCTAATCTTCACGTGTACGCTTaGGCAAAGAAGAACTGGGGG +
Preference number: 5 (lower is better)
Translates to: FTFASQMCMSSLHKGHANLHVYA*AKKNWG
Trigger: CCCCCAGTTCTTCTTTGCCAAAGCGTACACGTGAAG...ATTAGCATGGCCCTTGTGCAAGGATGACATGCACATTTGTGAAGCGAAAGTAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS TCA 90 bp CTTTCTGTTGACTTACTAGATGCTGGTTACGTGCTTTCCAACGTTTaGCATCCTCTTCTAAGAGCTTCTTCTCTGCCTGCAACATACCGC +
Preference number: 5 (lower is better)
Translates to: LSVDLLDAGYVLSNV*HPLLRASSLPATYR
Trigger: GCGGTATGTTGCAGGCAGAGAAGAAGCTCTTAGAAGAGGATGTCAAACGTTGGAAAGCACGTAACCAGCATCTAGTAAGTCAACAGAAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367478.9
ENST00000481347.1
CDS TCA 90 bp CTTCTTTGGAAGAGGCATTTCCACTGTATCATCAGAGACTTGGTCTaGTGCTTCTATGGTGCTATCCTCTTCCTCTTCACGTGTACGCTT +
Preference number: 5 (lower is better)
Translates to: LLWKRHFHCIIRDLV*CFYGAILFLFTCTL
Trigger: AAGCGTACACGTGAAGAGGAAGAGGATAGCACCATAGAAGCATCAGACCAAGTCTCTGATGATACAGTGGAAATGCCTCTTCCAAAGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS TCA 90 bp GTTGTAGATAAAGTGCCAGTGGATGTAGTCACCATTGGAACAGATTaGGAGGCATGTTCCGAAGCATCAGAGGTGGTGCTCTCAGTAAAT +
Preference number: 5 (lower is better)
Translates to: VVDKVPVDVVTIGTD*EACSEASEVVLSVN
Trigger: ATTTACTGAGAGCACCACCTCTGATGCTTCGGAACATGCCTCTCAATCTGTTCCAATGGTGACTACATCCACTGGCACTTTATCTACAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367478.9
ENST00000467810.1
CDS GCA 90 bp GCTTTCCAACGTTTGACATCCTCTTCTAAGAGCTTCTTCTCTGCCTaGAACATACCGCTTTTCTCACTCAGCTCAGCATTTGCTTCTTGT +
Preference number: 5 (lower is better)
Translates to: AFQRLTSSSKSFFSA*NIPLFSLSSAFASC
Trigger: ACAAGAAGCAAATGCTGAGCTGAGTGAGAAAAGCGGTATGTTGCAGGCAGAGAAGAAGCTCTTAGAAGAGGATGTCAAACGTTGGAAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367478.9
ENST00000481347.1
CDS GCA 90 bp GCATTTCCACTGTATCATCAGAGACTTGGTCTGATGCTTCTATGGTaGTATCCTCTTCCTCTTCACGTGTACGCTTTGGCAAAGAAGAAC +
Preference number: 5 (lower is better)
Translates to: AFPLYHQRLGLMLLW*YPLPLHVYALAKKN
Trigger: GTTCTTCTTTGCCAAAGCGTACACGTGAAGAGGAAGAGGATAGCACCATAGAAGCATCAGACCAAGTCTCTGATGATACAGTGGAAATGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR CAA 90 bp CACTGCCCAACATCAGAAAACCTGACGGCTATGATTACTATGCCTTTTCTAAAGGCCATCGATCTCGGATaGCTGATCAGCAAGGAACTT +
Preference number: 5 (lower is better)
Translates to: HCPTSENLTAMITMPFLKAIDLG*LISKEL
Trigger: AAGTTCCTTGCTGATCAGCAATCCGAGATCGATGGC...CTTTAGAAAAGGCATAGTAATCATAGCCGTCAGGTTTTCTGATGTTGGGCAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR CAA 90 bp AGGAGACGTCGCTTTGAACGTGCTATAGGACCTTCTCAAACACACACCATCAGAGCTTCTTTCAAAAGTTaGTGTAGTTCCTCTACTGCC +
Preference number: 5 (lower is better)
Translates to: RRRRFERAIGPSQTHTIRASFKS*CSSSTA
Trigger: GGCAGTAGAGGAACTACACAAACTTTTGAAAGAAGC...TCTGATGGTGTGTGTTTGAGAAGGTCCTATAGCACGTTCAAAGCGACGTCTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR CAA 90 bp GTGGTTACCTCAGCTATATCACTGCCCAACATCAGAAAACCTGACGGCTATGATCACAGCTATTTTAGCTaGTTCCTGACAGTCACGTCT +
Preference number: 5 (lower is better)
Translates to: VVTSAISLPNIRKPDGYDHSYFS*FLTVTS
Trigger: AGACGTGACTGTCAGGAACAAGCTAAAATAGCTGTG...ATCATAGCCGTCAGGTTTTCTGATGTTGGGCAGTGATATAGCTGAGGTAACCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR CAA 90 bp GTGGTTACCTCAGCTATATCACTGCCCAACATCAGAAAACCTGACGGCTATGATTACATTCAGTGGACCTaGTACACCTTCCTTCACAGA +
Preference number: 5 (lower is better)
Translates to: VVTSAISLPNIRKPDGYDYIQWT*YTFLHR
Trigger: TCTGTGAAGGAAGGTGTACAAGGTCCACTGAATGTA...ATCATAGCCGTCAGGTTTTCTGATGTTGGGCAGTGATATAGCTGAGGTAACCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR CAA 90 bp CACTGCCCAACATCAGAAAACCTGACGGCTATGATTACTATGCCTTTTCTAAAGCTTTTCAGTTATCTGTaGTCGGAGCTGCTCCTCCTG +
Preference number: 5 (lower is better)
Translates to: HCPTSENLTAMITMPFLKLFSYL*SELLLL
Trigger: CAGGAGGAGCAGCTCCGACAACAGATAACTGAAAAG...CTTTAGAAAAGGCATAGTAATCATAGCCGTCAGGTTTTCTGATGTTGGGCAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR CAA 90 bp CACTGCCCAACATCAGAAAACCTGACGGCTATGATTACTATGCCTTTTCTAAAGCTCAAGGTGTCTCTCTaGATGCTCCCTGAGTTCTCT +
Preference number: 5 (lower is better)
Translates to: HCPTSENLTAMITMPFLKLKVSL*MLPEFS
Trigger: AGAGAACTCAGGGAGCATCAAGAGAGACACCTTGAG...CTTTAGAAAAGGCATAGTAATCATAGCCGTCAGGTTTTCTGATGTTGGGCAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR CAA 90 bp TTTACTTTCGCTTCACAAATGTGCATGTCATCCTTGCACAAGGGCCATGCTAATCTGAGGATGACTCTGTaGAGTGGGTTGCACAAAAGC +
Preference number: 5 (lower is better)
Translates to: FTFASQMCMSSLHKGHANLRMTL*SGLHKS
Trigger: GCTTTTGTGCAACCCACTCAACAGAGTCATCCTCAG...ATTAGCATGGCCCTTGTGCAAGGATGACATGCACATTTGTGAAGCGAAAGTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR CAA 90 bp AGGAGACGTCGCTTTGAACGTGCTATAGGACCTTCTCAAACACACACCATCAGACACTTTTCAACTTCTTaGGAAGAGGCATTTCCACTG +
Preference number: 5 (lower is better)
Translates to: RRRRFERAIGPSQTHTIRHFSTS*EEAFPL
Trigger: CAGTGGAAATGCCTCTTCCAAAGAAGTTGAAAAGTG...TCTGATGGTGTGTGTTTGAGAAGGTCCTATAGCACGTTCAAAGCGACGTCTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR CAA 90 bp ACAGGTGTCCTTCATAATGAAGTTAAAGTGAGTATACTGTGGAGAGGACTTCCACATGAATGGTCAGTCTaGGGGGAAGTGGATGTGGTG +
Preference number: 5 (lower is better)
Translates to: TGVLHNEVKVSILWRGLPHEWSV*GEVDVV
Trigger: CACCACATCCACTTCCCCCAAGACTGACCATTCATG...TGGAAGTCCTCTCCACAGTATACTCACTTTAACTTCATTATGAAGGACACCTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR CAA 90 bp TTTACTTTCGCTTCACAAATGTGCATGTCATCCTTGCACAAGGGCCATGCTAATCCTGCGGCGAATGAATaGCTTCAGCAAATCCATCAG +
Preference number: 5 (lower is better)
Translates to: FTFASQMCMSSLHKGHANPAANE*LQQIHQ
Trigger: CTGATGGATTTGCTGAAGCAATTCATTCGCCGCAGG...ATTAGCATGGCCCTTGTGCAAGGATGACATGCACATTTGTGAAGCGAAAGTAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS TCA 90 bp TCCAACAACTGTGATTCTGCTTTCTGTGTTGTTTCTTCCAAATGCTaGCGGACTGATGCCATTTTTGAAACCTGCTCCTTCGCAGCTTGT +
Preference number: 5 (lower is better)
Translates to: SNNCDSAFCVVSSKC*RTDAIFETCSFAAC
Trigger: ACAAGCTGCGAAGGAGCAGGTTTCAAAAATGGCATCAGTCCGTCAGCATTTGGAAGAAACAACACAGAAAGCAGAATCACAGTTGTTGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS CCA 90 bp TTTCTTCCTTTTCAGTTATCTGTTGTCGGAGCTGCTCCTCCTGTGTaGTTCTATCTTGAAGATCCTGACGAAGTCGTGAAAGTTCAGACT +
Preference number: 5 (lower is better)
Translates to: FLPFQLSVVGAAPPV*FYLEDPDEVVKVQT
Trigger: AGTCTGAACTTTCACGACTTCGTCAGGATCTTCAAGATAGAACCACACAGGAGGAGCAGCTCCGACAACAGATAACTGAAAAGGAAGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS CCA 90 bp TGCTCCCTGAGTTCTCTTTCCAAGCGACTAATTCGACCTTCATATTaGGACTTTAGCGCAGTAATGCGAACATCCAATTCATCTTTCTGC +
Preference number: 5 (lower is better)
Translates to: CSLSSLSKRLIRPSY*DFSAVMRTSNSSFC
Trigger: GCAGAAAGATGAATTGGATGTTCGCATTACTGCGCTAAAGTCCCAATATGAAGGTCGAATTAGTCGCTTGGAAAGAGAACTCAGGGAGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR CAA 90 bp AGGAGACGTCGCTTTGAACGTGCTATAGGACCTTCTCAAACACACACCATCAGATTCAAAATTGGTGCTTaGGCTTCCACTTCTTTCACT +
Preference number: 5 (lower is better)
Translates to: RRRRFERAIGPSQTHTIRFKIGA*ASTSFT
Trigger: AGTGAAAGAAGTGGAAGCCAAAGCACCAATTTTGAA...TCTGATGGTGTGTGTTTGAGAAGGTCCTATAGCACGTTCAAAGCGACGTCTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR CAA 90 bp CACTGCCCAACATCAGAAAACCTGACGGCTATGATTACTATGCCTTTTCTAAAGGCTGGCGTTTCAAAATaGGTGCTTTGGCTTCCACTT +
Preference number: 5 (lower is better)
Translates to: HCPTSENLTAMITMPFLKAGVSK*VLWLPL
Trigger: AAGTGGAAGCCAAAGCACCAATTTTGAAACGCCAGC...CTTTAGAAAAGGCATAGTAATCATAGCCGTCAGGTTTTCTGATGTTGGGCAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR CAA 90 bp CACTGCCCAACATCAGAAAACCTGACGGCTATGATTACTATGCCTTTTCTAAAGTGGTTGAGCGTTTCTTaGAGTTCCTGCATTTCCTGG +
Preference number: 5 (lower is better)
Translates to: HCPTSENLTAMITMPFLKWLSVS*SSCISW
Trigger: CCAGGAAATGCAGGAACTCAAAGAAACGCTCAACCA...CTTTAGAAAAGGCATAGTAATCATAGCCGTCAGGTTTTCTGATGTTGGGCAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR CAA 90 bp GTGGTTACCTCAGCTATATCACTGCCCAACATCAGAAAACCTGACGGCTATGATTTTGTTTCAGCTTGGTaGAGCGTTTCTTTGAGTTCC +
Preference number: 5 (lower is better)
Translates to: VVTSAISLPNIRKPDGYDFVSAW*SVSLSS
Trigger: GGAACTCAAAGAAACGCTCAACCAAGCTGAAACAAA...ATCATAGCCGTCAGGTTTTCTGATGTTGGGCAGTGATATAGCTGAGGTAACCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR CAA 90 bp CTATATCACTGCCCAACATCAGAAAACCTGACGGCTATGATTACTATGCCTTTTGGAGTTGGCTTGATATaGGCTGTTGGTGGGTCTGAT +
Preference number: 5 (lower is better)
Translates to: LYHCPTSENLTAMITMPFGVGLI*AVGGSD
Trigger: ATCAGACCCACCAACAGCCAATATCAAGCCAACTCC...AAAAGGCATAGTAATCATAGCCGTCAGGTTTTCTGATGTTGGGCAGTGATATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR CAA 90 bp CTATATCACTGCCCAACATCAGAAAACCTGACGGCTATGATTACTATGCCTTTTACAACAGGAGTTGGCTaGATATTGGCTGTTGGTGGG +
Preference number: 5 (lower is better)
Translates to: LYHCPTSENLTAMITMPFTTGVG*ILAVGG
Trigger: CCCACCAACAGCCAATATCAAGCCAACTCCTGTTGT...AAAAGGCATAGTAATCATAGCCGTCAGGTTTTCTGATGTTGGGCAGTGATATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR CAA 90 bp ACAGGTGTCCTTCATAATGAAGTTAAAGTGAGTATACTGTGGAGAGGACTTCCAACTCTGTTGAGTGGGTaGCACAAAAGCTGTAGCCTG +
Preference number: 5 (lower is better)
Translates to: TGVLHNEVKVSILWRGLPTLLSG*HKSCSL
Trigger: CAGGCTACAGCTTTTGTGCAACCCACTCAACAGAGT...TGGAAGTCCTCTCCACAGTATACTCACTTTAACTTCATTATGAAGGACACCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR CAA 90 bp CTATATCACTGCCCAACATCAGAAAACCTGACGGCTATGATTACTATGCCTTTTGTGGCACCACAAGAGTaGGAGTACTTGGAACTGTTC +
Preference number: 5 (lower is better)
Translates to: LYHCPTSENLTAMITMPFVAPQE*EYLELF
Trigger: GAACAGTTCCAAGTACTCCAACTCTTGTGGTGCCAC...AAAAGGCATAGTAATCATAGCCGTCAGGTTTTCTGATGTTGGGCAGTGATATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR CAA 90 bp AGGAGACGTCGCTTTGAACGTGCTATAGGACCTTCTCAAACACACACCATCAGATCTGAAAGGCTTTGGTaGACTACTACTAGTATCTAC +
Preference number: 5 (lower is better)
Translates to: RRRRFERAIGPSQTHTIRSERLW*TTTSIY
Trigger: GTAGATACTAGTAGTAGTCAACCAAAGCCTTTCAGA...TCTGATGGTGTGTGTTTGAGAAGGTCCTATAGCACGTTCAAAGCGACGTCTCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR CAA 90 bp AGGAGACGTCGCTTTGAACGTGCTATAGGACCTTCTCAAACACACACCATCAGACAAGGTTATAATGATTaGCATCACTGCAGAGTCTGT +
Preference number: 5 (lower is better)
Translates to: RRRRFERAIGPSQTHTIRQGYND*HHCRVC
Trigger: ACAGACTCTGCAGTGATGCAAATCATTATAACCTTG...TCTGATGGTGTGTGTTTGAGAAGGTCCTATAGCACGTTCAAAGCGACGTCTCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS CCA 90 bp GTGAACTCTGAACAACCTCTACTATGTTTGAAGATAACTCTTGATTaGCAGGCTCAATCTGAGGATGACTCTGTTGAGTGGGTTGCACAA +
Preference number: 5 (lower is better)
Translates to: VNSEQPLLCLKITLD*QAQSEDDSVEWVAQ
Trigger: TTGTGCAACCCACTCAACAGAGTCATCCTCAGATTGAGCCTGCCAATCAAGAGTTATCTTCAAACATAGTAGAGGTTGTTCAGAGTTCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS CCA 90 bp TTCAACTTCTTTGGAAGAGGCATTTCCACTGTATCATCAGAGACTTaGTCTGATGCTTCTATGGTGCTATCCTCTTCCTCTTCACGTGTA +
Preference number: 5 (lower is better)
Translates to: FNFFGRGISTVSSET*SDASMVLSSSSSRV
Trigger: TACACGTGAAGAGGAAGAGGATAGCACCATAGAAGCATCAGACCAAGTCTCTGATGATACAGTGGAAATGCCTCTTCCAAAGAAGTTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR CAA 90 bp AGGAGACGTCGCTTTGAACGTGCTATAGGACCTTCTCAAACACACACCATCAGACATTTCTTTTTCCATTaGATCTTTGGATTGCTCCAC +
Preference number: 5 (lower is better)
Translates to: RRRRFERAIGPSQTHTIRHFFFH*IFGLLH
Trigger: GTGGAGCAATCCAAAGATCAAATGGAAAAAGAAATG...TCTGATGGTGTGTGTTTGAGAAGGTCCTATAGCACGTTCAAAGCGACGTCTCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR CAA 90 bp AGGAGACGTCGCTTTGAACGTGCTATAGGACCTTCTCAAACACACACCATCAGAAAACATCATCTAAGCTaGAAGCATGTAATGGAATGG +
Preference number: 5 (lower is better)
Translates to: RRRRFERAIGPSQTHTIRKHHLS*KHVMEW
Trigger: CCATTCCATTACATGCTTCAAGCTTAGATGATGTTT...TCTGATGGTGTGTGTTTGAGAAGGTCCTATAGCACGTTCAAAGCGACGTCTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR CAA 90 bp CACTGCCCAACATCAGAAAACCTGACGGCTATGATTACTATGCCTTTTCTAAAGCAGTCTGTGATGTACTaGGACGTTTTGGAGTTGATG +
Preference number: 5 (lower is better)
Translates to: HCPTSENLTAMITMPFLKQSVMY*DVLELM
Trigger: CATCAACTCCAAAACGTCCAAGTACATCACAGACTG...CTTTAGAAAAGGCATAGTAATCATAGCCGTCAGGTTTTCTGATGTTGGGCAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR CAA 90 bp GTGGTTACCTCAGCTATATCACTGCCCAACATCAGAAAACCTGACGGCTATGATATCTGTAACTTGTTCTaGAAGTTTCTCAAGCTGCTC +
Preference number: 5 (lower is better)
Translates to: VVTSAISLPNIRKPDGYDICNLF*KFLKLL
Trigger: GAGCAGCTTGAGAAACTTCAAGAACAAGTTACAGAT...ATCATAGCCGTCAGGTTTTCTGATGTTGGGCAGTGATATAGCTGAGGTAACCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR CAA 90 bp CACTGCCCAACATCAGAAAACCTGACGGCTATGATTACTATGCCTTTTCTAAAGCAGCTAGCTTCTCATTaGCTCCTCTCAAATCTTGAG +
Preference number: 5 (lower is better)
Translates to: HCPTSENLTAMITMPFLKQLASH*LLSNLE
Trigger: CTCAAGATTTGAGAGGAGCAAATGAGAAGCTAGCTG...CTTTAGAAAAGGCATAGTAATCATAGCCGTCAGGTTTTCTGATGTTGGGCAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR CAA 90 bp AGGAGACGTCGCTTTGAACGTGCTATAGGACCTTCTCAAACACACACCATCAGAACTAGTAACCATTGCTaGATATTGTTCCACATTGCT +
Preference number: 5 (lower is better)
Translates to: RRRRFERAIGPSQTHTIRTSNHC*ILFHIA
Trigger: AGCAATGTGGAACAATATCAAGCAATGGTTACTAGT...TCTGATGGTGTGTGTTTGAGAAGGTCCTATAGCACGTTCAAAGCGACGTCTCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR CAA 90 bp CCCTCAATAGTTCTACATCAGAGGGCTAAAACTGAGATTAAAACTCAGATGTCTGGACTGATGCCATTTTaGAAACCTGCTCCTTCGCAG +
Preference number: 5 (lower is better)
Translates to: PSIVLHQRAKTEIKTQMSGLMPF*KPAPSQ
Trigger: CTGCGAAGGAGCAGGTTTCAAAAATGGCATCAGTCC...AGACATCTGAGTTTTAATCTCAGTTTTAGCCCTCTGATGTAGAACTATTGAGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR CAA 90 bp CTATATCACTGCCCAACATCAGAAAACCTGACGGCTATGATTACTATGCCTTTTCGTGCTTTCCAACGTTaGACATCCTCTTCTAAGAGC +
Preference number: 5 (lower is better)
Translates to: LYHCPTSENLTAMITMPFRAFQR*TSSSKS
Trigger: GCTCTTAGAAGAGGATGTCAAACGTTGGAAAGCACG...AAAAGGCATAGTAATCATAGCCGTCAGGTTTTCTGATGTTGGGCAGTGATATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR CAA 90 bp ACAGGTGTCCTTCATAATGAAGTTAAAGTGAGTATACTGTGGAGAGGACTTCCAAAGTTCAGACTGAAGTaGCACAGTCTGTTCCTGGAG +
Preference number: 5 (lower is better)
Translates to: TGVLHNEVKVSILWRGLPKFRLK*HSLFLE
Trigger: CTCCAGGAACAGACTGTGCAACTTCAGTCTGAACTT...TGGAAGTCCTCTCCACAGTATACTCACTTTAACTTCATTATGAAGGACACCTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR CAA 90 bp TTTACTTTCGCTTCACAAATGTGCATGTCATCCTTGCACAAGGGCCATGCTAATAACGAACGGATCCACTaGTGCTTCCAAAAACTGGAA +
Preference number: 5 (lower is better)
Translates to: FTFASQMCMSSLHKGHANNERIH*CFQKLE
Trigger: TTCCAGTTTTTGGAAGCACAAGTGGATCCGTTCGTT...ATTAGCATGGCCCTTGTGCAAGGATGACATGCACATTTGTGAAGCGAAAGTAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR CAA 90 bp CTATATCACTGCCCAACATCAGAAAACCTGACGGCTATGATTACTATGCCTTTTTCCTTCACCACTGTTTaGAGAATCAGCAGCTCTGTG +
Preference number: 5 (lower is better)
Translates to: LYHCPTSENLTAMITMPFSFTTV*RISSSV
Trigger: CACAGAGCTGCTGATTCTCAAAACAGTGGTGAAGGA...AAAAGGCATAGTAATCATAGCCGTCAGGTTTTCTGATGTTGGGCAGTGATATAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR CAA 90 bp TTTACTTTCGCTTCACAAATGTGCATGTCATCCTTGCACAAGGGCCATGCTAATGTGACTAGAACTTGTTaGTGGCATATCTTCAGGTGG +
Preference number: 5 (lower is better)
Translates to: FTFASQMCMSSLHKGHANVTRTC*WHIFRW
Trigger: CCACCTGAAGATATGCCACAAACAAGTTCTAGTCAC...ATTAGCATGGCCCTTGTGCAAGGATGACATGCACATTTGTGAAGCGAAAGTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR CAA 90 bp CCCTCAATAGTTCTACATCAGAGGGCTAAAACTGAGATTAAAACTCAGATGTCTCACCATTGGAACAGATaGAGAGGCATGTTCCGAAGC +
Preference number: 5 (lower is better)
Translates to: PSIVLHQRAKTEIKTQMSHHWNR*RGMFRS
Trigger: GCTTCGGAACATGCCTCTCAATCTGTTCCAATGGTG...AGACATCTGAGTTTTAATCTCAGTTTTAGCCCTCTGATGTAGAACTATTGAGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR CAA 90 bp TTTACTTTCGCTTCACAAATGTGCATGTCATCCTTGCACAAGGGCCATGCTAATCACCTTGTCTCAATGTaGTCTGAAGTCTTACTCGTC +
Preference number: 5 (lower is better)
Translates to: FTFASQMCMSSLHKGHANHLVSM*SEVLLV
Trigger: GACGAGTAAGACTTCAGACAACATTGAGACAAGGTG...ATTAGCATGGCCCTTGTGCAAGGATGACATGCACATTTGTGAAGCGAAAGTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR CAA 90 bp AGGAGACGTCGCTTTGAACGTGCTATAGGACCTTCTCAAACACACACCATCAGACAAGTCACAATTCATTaGAGTTTTCAGGTCACTGAT +
Preference number: 5 (lower is better)
Translates to: RRRRFERAIGPSQTHTIRQVTIH*SFQVTD
Trigger: ATCAGTGACCTGAAAACTCAAATGAATTGTGACTTG...TCTGATGGTGTGTGTTTGAGAAGGTCCTATAGCACGTTCAAAGCGACGTCTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS GCA 90 bp TTTGCAGTTACCTGGACTTTCTCCCTTTCAGCATTTAGACTATCTTaGAGTTCCTGCAGCTCTCTTTCTAAAAGTTCAACCCTTTGTCGA +
Preference number: 5 (lower is better)
Translates to: FAVTWTFSLSAFRLS*SSCSSLSKSSTLCR
Trigger: TCGACAAAGGGTTGAACTTTTAGAAAGAGAGCTGCAGGAACTGCAAGATAGTCTAAATGCTGAAAGGGAGAAAGTCCAGGTAACTGCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS GCA 90 bp AGTATACCTACCTGGACTTTCTCCCTTTCAGCATTTAGACTATCTTaGAGTTCCTGCAGCTCTCTTTCTAAAAGTTCAACCCTTTGTCGA +
Preference number: 5 (lower is better)
Translates to: SIPTWTFSLSAFRLS*SSCSSLSKSSTLCR
Trigger: TCGACAAAGGGTTGAACTTTTAGAAAGAGAGCTGCAGGAACTGCAAGATAGTCTAAATGCTGAAAGGGAGAAAGTCCAGGTAGGTATACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481347.1
CDS CCA 90 bp GATAAACTTGCTACAGCTTTCTGTGCACGTTCATATTCCTCACGCTaGCGTTTCAAAATTGGTGCTTTGGCTTCCACTTCTTTCACTATT +
Preference number: 5 (lower is better)
Translates to: DKLATAFCARSYSSR*RFKIGALASTSFTI
Trigger: AATAGTGAAAGAAGTGGAAGCCAAAGCACCAATTTTGAAACGCCAGCGTGAGGAATATGAACGTGCACAGAAAGCTGTAGCAAGTTTATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367478.9
ENST00000474852.1
ENST00000613151.1
CDS CCA 90 bp AATTTGTTCTTGAGATTTTCCTTCTTCACTGAGAGATACATTCAGTaGACCTTGTACACCTTCCTTCACAGAGGCAACGACCTTGTCACT +
Preference number: 5 (lower is better)
Translates to: NLFLRFSFFTERYIQ*TLYTFLHRGNDLVT
Trigger: AGTGACAAGGTCGTTGCCTCTGTGAAGGAAGGTGTACAAGGTCCACTGAATGTATCTCTCAGTGAAGAAGGAAAATCTCAAGAACAAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367478.9
ENST00000481347.1
CDS-3UTR CAA 90 bp CCCTCAATAGTTCTACATCAGAGGGCTAAAACTGAGATTAAAACTCAGATGTCTCTGGCCTGTTGTTCCTaGGCCTCTTTTAATTTGGTC +
Preference number: 5 (lower is better)
Translates to: PSIVLHQRAKTEIKTQMSLACCS*ASFNLV
Trigger: GACCAAATTAAAAGAGGCCAAGGAACAACAGGCCAG...AGACATCTGAGTTTTAATCTCAGTTTTAGCCCTCTGATGTAGAACTATTGAGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR CAA 90 bp ACAGGTGTCCTTCATAATGAAGTTAAAGTGAGTATACTGTGGAGAGGACTTCCATTAGTTCATTGCTCTTaGCTTCTGAGTCATCAGCGG +
Preference number: 5 (lower is better)
Translates to: TGVLHNEVKVSILWRGLPLVHCS*LLSHQR
Trigger: CCGCTGATGACTCAGAAGCAAAGAGCAATGAACTAA...TGGAAGTCCTCTCCACAGTATACTCACTTTAACTTCATTATGAAGGACACCTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR CAA 90 bp CACTGCCCAACATCAGAAAACCTGACGGCTATGATTACTATGCCTTTTCTAAAGAGACTGAGAAGCAACTaGGACTTCCATATTACTGAG +
Preference number: 5 (lower is better)
Translates to: HCPTSENLTAMITMPFLKRLRSN*DFHITE
Trigger: CTCAGTAATATGGAAGTCCAAGTTGCTTCTCAGTCT...CTTTAGAAAAGGCATAGTAATCATAGCCGTCAGGTTTTCTGATGTTGGGCAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR CAA 90 bp CTATATCACTGCCCAACATCAGAAAACCTGACGGCTATGATTACTATGCCTTTTCCAGTTTCCTCACCTTaGCTTGCATTTGCTGTAGAT +
Preference number: 5 (lower is better)
Translates to: LYHCPTSENLTAMITMPFPVSSP*LAFAVD
Trigger: ATCTACAGCAAATGCAAGCAAAGGTGAGGAAACTGG...AAAAGGCATAGTAATCATAGCCGTCAGGTTTTCTGATGTTGGGCAGTGATATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR CAA 90 bp GTGGTTACCTCAGCTATATCACTGCCCAACATCAGAAAACCTGACGGCTATGATTTTAAGTTCTTCATATaGAGTCTTGTACCTACGTCC +
Preference number: 5 (lower is better)
Translates to: VVTSAISLPNIRKPDGYDFKFFI*SLVPTS
Trigger: GGACGTAGGTACAAGACTCAATATGAAGAACTTAAA...ATCATAGCCGTCAGGTTTTCTGATGTTGGGCAGTGATATAGCTGAGGTAACCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR CAA 90 bp CCCTCAATAGTTCTACATCAGAGGGCTAAAACTGAGATTAAAACTCAGATGTCTCATCCTGGGATGAAGTaGTCGTCTGCTGATCTGATT +
Preference number: 5 (lower is better)
Translates to: PSIVLHQRAKTEIKTQMSHPGMK*SSADLI
Trigger: AATCAGATCAGCAGACGACAACTTCATCCCAGGATG...AGACATCTGAGTTTTAATCTCAGTTTTAGCCCTCTGATGTAGAACTATTGAGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS CCA 90 bp GAACTACTTATATCAGCAGAGCTTACTTCCTCATCACGAATTACGTaGTTACCCCTTGCTTCTTCAAGTTCCATCAAAAGCACTCTAATC +
Preference number: 5 (lower is better)
Translates to: ELLISAELTSSSRIT*LPLASSSSIKSTLI
Trigger: GATTAGAGTGCTTTTGATGGAACTTGAAGAAGCAAGGGGTAACCACGTAATTCGTGATGAGGAAGTAAGCTCTGCTGATATAAGTAGTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367478.9
ENST00000474852.1
ENST00000613151.1
CDS-3UTR CAA 90 bp CTATATCACTGCCCAACATCAGAAAACCTGACGGCTATGATTACTATGCCTTTTGAAGATGATCTTGTATaGCTTTGTTGGCTTCACCAG +
Preference number: 5 (lower is better)
Translates to: LYHCPTSENLTAMITMPFEDDLV*LCWLHQ
Trigger: CTGGTGAAGCCAACAAAGCAATACAAGATCATCTTC...AAAAGGCATAGTAATCATAGCCGTCAGGTTTTCTGATGTTGGGCAGTGATATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR CAA 90 bp CCCTCAATAGTTCTACATCAGAGGGCTAAAACTGAGATTAAAACTCAGATGTCTTGGCTCCTTTACGTTTaGTGGCAGAAAGAAGGTCAT +
Preference number: 5 (lower is better)
Translates to: PSIVLHQRAKTEIKTQMSWLLYV*WQKEGH
Trigger: ATGACCTTCTTTCTGCCACAAAACGTAAAGGAGCCA...AGACATCTGAGTTTTAATCTCAGTTTTAGCCCTCTGATGTAGAACTATTGAGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR CAA 90 bp CCCTCAATAGTTCTACATCAGAGGGCTAAAACTGAGATTAAAACTCAGATGTCTACAGATGATTGCTTGTaGGCTTTATCAGTGTCCTCC +
Preference number: 5 (lower is better)
Translates to: PSIVLHQRAKTEIKTQMSTDDCL*ALSVSS
Trigger: GGAGGACACTGATAAAGCCAACAAGCAATCATCTGT...AGACATCTGAGTTTTAATCTCAGTTTTAGCCCTCTGATGTAGAACTATTGAGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR CAA 90 bp ACAGGTGTCCTTCATAATGAAGTTAAAGTGAGTATACTGTGGAGAGGACTTCCAAGTACAGATGATTGCTaGTTGGCTTTATCAGTGTCC +
Preference number: 5 (lower is better)
Translates to: TGVLHNEVKVSILWRGLPSTDDC*LALSVS
Trigger: GGACACTGATAAAGCCAACAAGCAATCATCTGTACT...TGGAAGTCCTCTCCACAGTATACTCACTTTAACTTCATTATGAAGGACACCTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR CAA 90 bp CCCTCAATAGTTCTACATCAGAGGGCTAAAACTGAGATTAAAACTCAGATGTCTTTACGTGGTTACCCCTaGCTTCTTCAAGTTCCATCA +
Preference number: 5 (lower is better)
Translates to: PSIVLHQRAKTEIKTQMSLRGYP*LLQVPS
Trigger: TGATGGAACTTGAAGAAGCAAGGGGTAACCACGTAA...AGACATCTGAGTTTTAATCTCAGTTTTAGCCCTCTGATGTAGAACTATTGAGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR CAA 90 bp TTTACTTTCGCTTCACAAATGTGCATGTCATCCTTGCACAAGGGCCATGCTAATATGTACTTGGACGTTTaGGAGTTGATGCAAGAGAAA +
Preference number: 5 (lower is better)
Translates to: FTFASQMCMSSLHKGHANMYLDV*ELMQEK
Trigger: TTTCTCTTGCATCAACTCCAAAACGTCCAAGTACAT...ATTAGCATGGCCCTTGTGCAAGGATGACATGCACATTTGTGAAGCGAAAGTAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR CAA 90 bp CACTGCCCAACATCAGAAAACCTGACGGCTATGATTACTATGCCTTTTCTAAAGTTGCTCGTACTTGTTTaGAGTCTCTCCTTTAAGTCA +
Preference number: 5 (lower is better)
Translates to: HCPTSENLTAMITMPFLKLLVLV*SLSFKS
Trigger: TGACTTAAAGGAGAGACTCAAAACAAGTACGAGCAA...CTTTAGAAAAGGCATAGTAATCATAGCCGTCAGGTTTTCTGATGTTGGGCAGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR CAA 90 bp CTATATCACTGCCCAACATCAGAAAACCTGACGGCTATGATTACTATGCCTTTTCACTCAGCTCAGCATTaGCTTCTTGTAAGGGTAAAA +
Preference number: 5 (lower is better)
Translates to: LYHCPTSENLTAMITMPFHSAQH*LLVRVK
Trigger: TTTTACCCTTACAAGAAGCAAATGCTGAGCTGAGTG...AAAAGGCATAGTAATCATAGCCGTCAGGTTTTCTGATGTTGGGCAGTGATATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR CAA 90 bp CCCTCAATAGTTCTACATCAGAGGGCTAAAACTGAGATTAAAACTCAGATGTCTCTTATTAGAAGGTTCTaGAGGCTCATCTCTCTGCTC +
Preference number: 5 (lower is better)
Translates to: PSIVLHQRAKTEIKTQMSLIRRF*RLISLL
Trigger: GAGCAGAGAGATGAGCCTCAAGAACCTTCTAATAAG...AGACATCTGAGTTTTAATCTCAGTTTTAGCCCTCTGATGTAGAACTATTGAGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS CCA 90 bp TTGTTTGTGACAATAAAATACGGTACATATCACGCTGACGAACTATaGAATCAACAAGCTGCATTTGATGCTGTCGTGATTTGCGGAGTT +
Preference number: 5 (lower is better)
Translates to: LFVTIKYGTYHADEL*NQQAAFDAVVICGV
Trigger: AACTCCGCAAATCACGACAGCATCAAATGCAGCTTGTTGATTCCATAGTTCGTCAGCGTGATATGTACCGTATTTTATTGTCACAAACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367478.9
ENST00000474852.1
ENST00000491783.5
ENST00000613151.1
CDS-3UTR CAA 90 bp CACTGCCCAACATCAGAAAACCTGACGGCTATGATTACTATGCCTTTTCTAAAGGCAATTTCAAGTTCTTaGTTTTTCTCAGTTAGTGCC +
Preference number: 5 (lower is better)
Translates to: HCPTSENLTAMITMPFLKAISSS*FFSVSA
Trigger: GGCACTAACTGAGAAAAACAAAGAACTTGAAATTGC...CTTTAGAAAAGGCATAGTAATCATAGCCGTCAGGTTTTCTGATGTTGGGCAGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR CAA 90 bp CCCTCAATAGTTCTACATCAGAGGGCTAAAACTGAGATTAAAACTCAGATGTCTTTGGCCTCTTTTAATTaGGTCAACAGATCCTCCACA +
Preference number: 5 (lower is better)
Translates to: PSIVLHQRAKTEIKTQMSLASFN*VNRSST
Trigger: TGTGGAGGATCTGTTGACCAAATTAAAAGAGGCCAA...AGACATCTGAGTTTTAATCTCAGTTTTAGCCCTCTGATGTAGAACTATTGAGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR CAA 90 bp CTATATCACTGCCCAACATCAGAAAACCTGACGGCTATGATTACTATGCCTTTTTTGGACGTTTTGGAGTaGATGCAAGAGAAACATCAT +
Preference number: 5 (lower is better)
Translates to: LYHCPTSENLTAMITMPFLDVLE*MQEKHH
Trigger: ATGATGTTTCTCTTGCATCAACTCCAAAACGTCCAA...AAAAGGCATAGTAATCATAGCCGTCAGGTTTTCTGATGTTGGGCAGTGATATAG
40% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR CAA 90 bp TTTACTTTCGCTTCACAAATGTGCATGTCATCCTTGCACAAGGGCCATGCTAATTGCTCCTCTCAAATCTaGAGTCATCGTATTGATAAT +
Preference number: 5 (lower is better)
Translates to: FTFASQMCMSSLHKGHANCSSQI*SHRIDN
Trigger: ATTATCAATACGATGACTCAAGATTTGAGAGGAGCA...ATTAGCATGGCCCTTGTGCAAGGATGACATGCACATTTGTGAAGCGAAAGTAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR CAA 90 bp ACAGGTGTCCTTCATAATGAAGTTAAAGTGAGTATACTGTGGAGAGGACTTCCAAGTAAGTGTATGCCTTaGTTCCACCTCATTTTCCAA +
Preference number: 5 (lower is better)
Translates to: TGVLHNEVKVSILWRGLPSKCMP*FHLIFQ
Trigger: TTGGAAAATGAGGTGGAACAAAGGCATACACTTACT...TGGAAGTCCTCTCCACAGTATACTCACTTTAACTTCATTATGAAGGACACCTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR CAA 90 bp ACAGGTGTCCTTCATAATGAAGTTAAAGTGAGTATACTGTGGAGAGGACTTCCATCTCTGAAGAGCTTCTaGTACTTCATTCTGAACACT +
Preference number: 5 (lower is better)
Translates to: TGVLHNEVKVSILWRGLPSLKSF*YFILNT
Trigger: AGTGTTCAGAATGAAGTACAAGAAGCTCTTCAGAGA...TGGAAGTCCTCTCCACAGTATACTCACTTTAACTTCATTATGAAGGACACCTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR CAA 90 bp TTTACTTTCGCTTCACAAATGTGCATGTCATCCTTGCACAAGGGCCATGCTAATTGGATATCAATTATTTaGGCATCTAAGTCCTTCTGG +
Preference number: 5 (lower is better)
Translates to: FTFASQMCMSSLHKGHANWISII*ASKSFW
Trigger: CCAGAAGGACTTAGATGCCAAAATAATTGATATCCA...ATTAGCATGGCCCTTGTGCAAGGATGACATGCACATTTGTGAAGCGAAAGTAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR CAA 90 bp CTATATCACTGCCCAACATCAGAAAACCTGACGGCTATGATTACTATGCCTTTTTTCTCCAATGGAATCTaGAGAATCCTGGTTGTATAC +
Preference number: 5 (lower is better)
Translates to: LYHCPTSENLTAMITMPFFSNGI*RILVVY
Trigger: GTATACAACCAGGATTCTCAAGATTCCATTGGAGAA...AAAAGGCATAGTAATCATAGCCGTCAGGTTTTCTGATGTTGGGCAGTGATATAG
40% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR CAA 90 bp CACTGCCCAACATCAGAAAACCTGACGGCTATGATTACTATGCCTTTTCTAAAGTGCCAAACTGAGCACTaGTCACTTTCAATTGAAATT +
Preference number: 5 (lower is better)
Translates to: HCPTSENLTAMITMPFLKCQTEH*SLSIEI
Trigger: AATTTCAATTGAAAGTGACAAGTGCTCAGTTTGGCA...CTTTAGAAAAGGCATAGTAATCATAGCCGTCAGGTTTTCTGATGTTGGGCAGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR CAA 90 bp ACAGGTGTCCTTCATAATGAAGTTAAAGTGAGTATACTGTGGAGAGGACTTCCATCATCAGCGGCACTCTaGTACAAATTAGAAAGTTTT +
Preference number: 5 (lower is better)
Translates to: TGVLHNEVKVSILWRGLPSSAAL*YKLESF
Trigger: AAAACTTTCTAATTTGTACAAGAGTGCCGCTGATGA...TGGAAGTCCTCTCCACAGTATACTCACTTTAACTTCATTATGAAGGACACCTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR CAA 90 bp CCCTCAATAGTTCTACATCAGAGGGCTAAAACTGAGATTAAAACTCAGATGTCTAATCTGTTCTTGCTTTaGAGTTGTGGCAGTGAGTTT +
Preference number: 5 (lower is better)
Translates to: PSIVLHQRAKTEIKTQMSNLFLL*SCGSEF
Trigger: AAACTCACTGCCACAACTCAAAAGCAAGAACAGATT...AGACATCTGAGTTTTAATCTCAGTTTTAGCCCTCTGATGTAGAACTATTGAGGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR CAA 90 bp CTATATCACTGCCCAACATCAGAAAACCTGACGGCTATGATTACTATGCCTTTTCAACCTCTACTATGTTaGAAGATAACTCTTGATTGG +
Preference number: 5 (lower is better)
Translates to: LYHCPTSENLTAMITMPFQPLLC*KITLDW
Trigger: CCAATCAAGAGTTATCTTCAAACATAGTAGAGGTTG...AAAAGGCATAGTAATCATAGCCGTCAGGTTTTCTGATGTTGGGCAGTGATATAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS TCA 90 bp TTTTACTTGTATTTCCATTCTTCGATTATCTCTCTCAAGTACAGATaGTTGCTTGTTGGCTTTATCAGTGTCCTCCTGCAATCGCTGAAT +
Preference number: 5 (lower is better)
Translates to: FYLYFHSSIISLKYR*LLVGFISVLLQSLN
Trigger: ATTCAGCGATTGCAGGAGGACACTGATAAAGCCAACAAGCAATCATCTGTACTTGAGAGAGATAATCGAAGAATGGAAATACAAGTAAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367478.9
ENST00000474852.1
ENST00000613151.1
CDS TCA 90 bp TTGCTTTTGAGTTGTGGCAGTGAGTTTCTGATTTCTCTCATGAAGTaGTGTTATTTCTCGACGATATCCTTCAACATTATCTTGCAGCAT +
Preference number: 5 (lower is better)
Translates to: LLLSCGSEFLISLMK*CYFSTISFNIILQH
Trigger: ATGCTGCAAGATAATGTTGAAGGATATCGTCGAGAAATAACATCACTTCATGAGAGAAATCAGAAACTCACTGCCACAACTCAAAAGCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367478.9
ENST00000469463.1
ENST00000474852.1
ENST00000491783.5
CDS CCA 90 bp TCTTTTGATTTAACAAGTGCTTTCTTAAAGCTTAGTATACCTACCTaGACTTTCTCCCTTTCAGCATTTAGACTATCTTGCAGTTCCTGC +
Preference number: 5 (lower is better)
Translates to: SFDLTSAFLKLSIPT*TFSLSAFRLSCSSC
Trigger: GCAGGAACTGCAAGATAGTCTAAATGCTGAAAGGGAGAAAGTCCAGGTAGGTATACTAAGCTTTAAGAAAGCACTTGTTAAATCAAAAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481347.1
CDS-3UTR CAA 90 bp CCCTCAATAGTTCTACATCAGAGGGCTAAAACTGAGATTAAAACTCAGATGTCTGAATGGCAACTCCTGTaGTTTGTGACAATAAAATAC +
Preference number: 5 (lower is better)
Translates to: PSIVLHQRAKTEIKTQMSEWQLL*FVTIKY
Trigger: GTATTTTATTGTCACAAACAACAGGAGTTGCCATTC...AGACATCTGAGTTTTAATCTCAGTTTTAGCCCTCTGATGTAGAACTATTGAGGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR CAA 90 bp CCCTCAATAGTTCTACATCAGAGGGCTAAAACTGAGATTAAAACTCAGATGTCTTCGCAAATCTGTAACTaGTTCTTGAAGTTTCTCAAG +
Preference number: 5 (lower is better)
Translates to: PSIVLHQRAKTEIKTQMSSQICN*FLKFLK
Trigger: CTTGAGAAACTTCAAGAACAAGTTACAGATTTGCGA...AGACATCTGAGTTTTAATCTCAGTTTTAGCCCTCTGATGTAGAACTATTGAGGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS-3UTR CAA 90 bp CCCTCAATAGTTCTACATCAGAGGGCTAAAACTGAGATTAAAACTCAGATGTCTATTGATAATCTGTTCTaGCTTTTGAGTTGTGGCAGT +
Preference number: 5 (lower is better)
Translates to: PSIVLHQRAKTEIKTQMSIDNLF*LLSCGS
Trigger: ACTGCCACAACTCAAAAGCAAGAACAGATTATCAAT...AGACATCTGAGTTTTAATCTCAGTTTTAGCCCTCTGATGTAGAACTATTGAGGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS TCA 90 bp TGTTTTTCCTTGTTCAGGGATTCTTCTAAACTAGTAACCATTGCTTaGTATTGTTCCACATTGCTCGTACTTGTTTTGAGTCTCTCCTTT +
Preference number: 5 (lower is better)
Translates to: CFSLFRDSSKLVTIA*YCSTLLVLVLSLSF
Trigger: AAAGGAGAGACTCAAAACAAGTACGAGCAATGTGGAACAATATCAAGCAATGGTTACTAGTTTAGAAGAATCCCTGAACAAGGAAAAACA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS CCA 72 bp CCTCACCGCCCGCGACCGAAGTGCGCGCGCAGCCGTTaGAAGCTACGAACCCTGGGAACCCGAGCTCAGAGG +
Preference number: 6 (lower is better)
Translates to: PHRPRPKCARSR*KLRTLGTRAQR
Trigger: CCTCTGAGCTCGGGTTCCCAGGGTTCGTAGCTTCCAACGGCTGCGCGCGCACTTCGGTCGCGGGCGGTGAGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474852.1
ENST00000613151.1
CDS GCA 72 bp GGCAGCTTGTTCAGCTCCGTGCGCTCCAGGACTTGCTaGAACACCGCCGCCATGTCGGTGGGGCCAGGGACC +
Preference number: 6 (lower is better)
Translates to: GSLFSSVRSRTC*NTAAMSVGPGT
Trigger: GGTCCCTGGCCCCACCGACATGGCGGCGGTGTTGCAGCAAGTCCTGGAGCGCACGGAGCTGAACAAGCTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367478.9
ENST00000451586.1
ENST00000474852.1
ENST00000613151.1
CDS GCA 72 bp GAGACTCCCGCGGCGGGACCCGTCAAAGCCCCGGGATaGCATGGATCGTCCTCGTTGGCGGCTTCTGGACAC +
Preference number: 6 (lower is better)
Translates to: ETPAAGPVKAPG*HGSSSLAASGH
Trigger: GTGTCCAGAAGCCGCCAACGAGGACGATCCATGGCATCCCGGGGCTTTGACGGGTCCCGCCGCGGGAGTCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451586.1
CDS CCA 72 bp TCCCGCGGCGGGACCCGTCAAAGCCCCGGGATGCCATaGATCGTCCTCGTTGGCGGCTTCTGGACACTGAGC +
Preference number: 6 (lower is better)
Translates to: SRGGTRQSPGMP*IVLVGGFWTLS
Trigger: GCTCAGTGTCCAGAAGCCGCCAACGAGGACGATCCATGGCATCCCGGGGCTTTGACGGGTCCCGCCGCGGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451586.1
CDS CAA 72 bp ACCTCACCGCCCGCGACCGAAGTGCGCGCGCAGCCGTaGGAAGCTACGAACCCTGGGAACCCGAGCTCAGAG +
Preference number: 6 (lower is better)
Translates to: TSPPATEVRAQP*EATNPGNPSSE
Trigger: CTCTGAGCTCGGGTTCCCAGGGTTCGTAGCTTCCAACGGCTGCGCGCGCACTTCGGTCGCGGGCGGTGAGGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474852.1
ENST00000613151.1
CDS GCA 72 bp TTGGGCAGCTTGTTCAGCTCCGTGCGCTCCAGGACTTaGTGCAACACCGCCGCCATGTCGGTGGGGCCAGGG +
Preference number: 6 (lower is better)
Translates to: LGSLFSSVRSRT*CNTAAMSVGPG
Trigger: CCCTGGCCCCACCGACATGGCGGCGGTGTTGCAGCAAGTCCTGGAGCGCACGGAGCTGAACAAGCTGCCCAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367478.9
ENST00000451586.1
ENST00000474852.1
ENST00000613151.1
CDS CCA 72 bp GAGAAGAAAGGCGAAGACCAGCAGGACCCAGACGCCTaGGCCGCCGCCTCTATCACCTCGCTCGGTGGCTCG +
Preference number: 6 (lower is better)
Translates to: EKKGEDQQDPDA*AAASITSLGGS
Trigger: CGAGCCACCGAGCGAGGTGATAGAGGCGGCGGCCCAGGCGTCTGGGTCCTGCTGGTCTTCGCCTTTCTTCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367478.9
ENST00000451586.1
ENST00000474852.1
ENST00000613151.1
CDS CAA 72 bp CTTGGGCAGCTTGTTCAGCTCCGTGCGCTCCAGGACTaGCTGCAACACCGCCGCCATGTCGGTGGGGCCAGG +
Preference number: 6 (lower is better)
Translates to: LGQLVQLRALQD*LQHRRHVGGAR
Trigger: CCTGGCCCCACCGACATGGCGGCGGTGTTGCAGCAAGTCCTGGAGCGCACGGAGCTGAACAAGCTGCCCAAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367478.9
ENST00000451586.1
ENST00000474852.1
ENST00000613151.1
CDS CAA 90 bp CTGGACAGACTTGGGCAGCTTGTTCAGCTCCGTGCGCTCCAGGACTaGCTGCAACACCGCCGCCATGTCGGTGGGGCCAGGGACCCCAGT +
Preference number: 6 (lower is better)
Translates to: LDRLGQLVQLRALQD*LQHRRHVGGARDPS
Trigger: ACTGGGGTCCCTGGCCCCACCGACATGGCGGCGGTGTTGCAGCAAGTCCTGGAGCGCACGGAGCTGAACAAGCTGCCCAAGTCTGTCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000367478.9
ENST00000451586.1
ENST00000474852.1
ENST00000613151.1
CDS CAA 90 bp AGCAACAGCACCTCACCGCCCGCGACCGAAGTGCGCGCGCAGCCGTaGGAAGCTACGAACCCTGGGAACCCGAGCTCAGAGGCTATCCCT +
Preference number: 6 (lower is better)
Translates to: SNSTSPPATEVRAQP*EATNPGNPSSEAIP
Trigger: AGGGATAGCCTCTGAGCTCGGGTTCCCAGGGTTCGTAGCTTCCAACGGCTGCGCGCGCACTTCGGTCGCGGGCGGTGAGGTGCTGTTGCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474852.1
ENST00000613151.1
CDS GCA 72 bp GTTTCAGCAACAGCACCTCACCGCCCGCGACCGAAGTaGGCGCGCAGCCGTTGGAAGCTACGAACCCTGGGA +
Preference number: 6 (lower is better)
Translates to: VSATAPHRPRPK*ARSRWKLRTLG
Trigger: TCCCAGGGTTCGTAGCTTCCAACGGCTGCGCGCGCACTTCGGTCGCGGGCGGTGAGGTGCTGTTGCTGAAAC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474852.1
ENST00000613151.1
CDS CCA 72 bp CCGTCAAAGCCCCGGGATGCCATGGATCGTCCTCGTTaGCGGCTTCTGGACACTGAGCCACTAGAGGGCATC +
Preference number: 6 (lower is better)
Translates to: PSKPRDAMDRPR*RLLDTEPLEGI
Trigger: GATGCCCTCTAGTGGCTCAGTGTCCAGAAGCCGCCAACGAGGACGATCCATGGCATCCCGGGGCTTTGACGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451586.1
CDS CAA 90 bp GAACTGGTGGTCCCAACTCCTGAGGTGGGGCATGAATGGTCAGTCTaGGGGGAAGTGGATGTGGTGGGCGTCTCGGTGACTGAGGTGCTC +
Preference number: 6 (lower is better)
Translates to: ELVVPTPEVGHEWSV*GEVDVVGVSVTEVL
Trigger: GAGCACCTCAGTCACCGAGACGCCCACCACATCCACTTCCCCCAAGACTGACCATTCATGCCCCACCTCAGGAGTTGGGACCACCAGTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS TCA 72 bp CTTGGGGGAAGTGGATGTGGTGGGCGTCTCGGTGACTaGGGTGCTCGAGGGGCCTGTCTTTCAGATGCTGAT +
Preference number: 6 (lower is better)
Translates to: LGGSGCGGRLGD*GARGACLSDAD
Trigger: ATCAGCATCTGAAAGACAGGCCCCTCGAGCACCTCAGTCACCGAGACGCCCACCACATCCACTTCCCCCAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS CAA 90 bp TCAGCAAGGAACTTTTCAAGTTTGTTCTGGACAGACTTGGGCAGCTaGTTCAGCTCCGTGCGCTCCAGGACTTGCTGCAACACCGCCGCC +
Preference number: 6 (lower is better)
Translates to: SARNFSSLFWTDLGS*FSSVRSRTCCNTAA
Trigger: GGCGGCGGTGTTGCAGCAAGTCCTGGAGCGCACGGAGCTGAACAAGCTGCCCAAGTCTGTCCAGAACAAACTTGAAAAGTTCCTTGCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367478.9
ENST00000451586.1
ENST00000474852.1
ENST00000613151.1
CDS CCA 72 bp CTGAATTCTCTGAACTGGTGGTCCCAACTCCTGAGGTaGGGCATGAATGGTCAGTCTTGGGGGAAGTGGATG +
Preference number: 6 (lower is better)
Translates to: LNSLNWWSQLLR*GMNGQSWGKWM
Trigger: CATCCACTTCCCCCAAGACTGACCATTCATGCCCCACCTCAGGAGTTGGGACCACCAGTTCAGAGAATTCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS TCA 72 bp AAATGCTGTTGCATGCCACCTATTCCTGGAGTCAACTaGAGGCCACGTCCTACAGACTGCCTTCGGGTCATC +
Preference number: 6 (lower is better)
Translates to: KCCCMPPIPGVN*RPRPTDCLRVI
Trigger: GATGACCCGAAGGCAGTCTGTAGGACGTGGCCTTCAGTTGACTCCAGGAATAGGTGGCATGCAACAGCATTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367478.9
ENST00000467810.1
CDS GCA 72 bp TGTAGCTGTTGGGGTAGTAGTGGGATTTGTAACAGTTaGAGGTGTAACCATTGGGCGGATACTAGCCCTGGG +
Preference number: 6 (lower is better)
Translates to: CSCWGSSGICNS*RCNHWADTSPG
Trigger: CCCAGGGCTAGTATCCGCCCAATGGTTACACCTGCAACTGTTACAAATCCCACTACTACCCCAACAGCTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS CCA 72 bp TATGGTGCTATCCTCTTCCTCTTCACGTGTACGCTTTaGCAAAGAAGAACTGGGGGTAGCCGAAACTGTGCC +
Preference number: 6 (lower is better)
Translates to: YGAILFLFTCTL*QRRTGGSRNCA
Trigger: GGCACAGTTTCGGCTACCCCCAGTTCTTCTTTGCCAAAGCGTACACGTGAAGAGGAAGAGGATAGCACCATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS CAA 72 bp AACTTTTCAAGTTTGTTCTGGACAGACTTGGGCAGCTaGTTCAGCTCCGTGCGCTCCAGGACTTGCTGCAAC +
Preference number: 6 (lower is better)
Translates to: NFSSLFWTDLGS*FSSVRSRTCCN
Trigger: GTTGCAGCAAGTCCTGGAGCGCACGGAGCTGAACAAGCTGCCCAAGTCTGTCCAGAACAAACTTGAAAAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367478.9
ENST00000451586.1
ENST00000474852.1
ENST00000613151.1
CDS CAA 72 bp TCAGCAAGGAACTTTTCAAGTTTGTTCTGGACAGACTaGGGCAGCTTGTTCAGCTCCGTGCGCTCCAGGACT +
Preference number: 6 (lower is better)
Translates to: SARNFSSLFWTD*GSLFSSVRSRT
Trigger: AGTCCTGGAGCGCACGGAGCTGAACAAGCTGCCCAAGTCTGTCCAGAACAAACTTGAAAAGTTCCTTGCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367478.9
ENST00000451586.1
ENST00000474852.1
ENST00000613151.1
CDS CAA 90 bp TCCTTGAGAAGCAAGCTGGCCAAGATCAGAGTGACTAGAACTTGTTaGTGGCATATCTTCAGGTGGCCCAAACCGGAATCTAGGGACACC +
Preference number: 6 (lower is better)
Translates to: SLRSKLAKIRVTRTC*WHIFRWPKPESRDT
Trigger: GGTGTCCCTAGATTCCGGTTTGGGCCACCTGAAGATATGCCACAAACAAGTTCTAGTCACTCTGATCTTGGCCAGCTTGCTTCTCAAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367478.9
ENST00000467810.1
CDS TCA 72 bp AACAGGAGTTGGCTTGATATTGGCTGTTGGTGGGTCTaGTGTGCTGGCAATTCCTCTTTCACCAGAAGCTGG +
Preference number: 6 (lower is better)
Translates to: NRSWLDIGCWWV*CAGNSSFTRSW
Trigger: CCAGCTTCTGGTGAAAGAGGAATTGCCAGCACATCAGACCCACCAACAGCCAATATCAAGCCAACTCCTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS TCA 72 bp AGGTGTAACCATTGGGCGGATACTAGCCCTGGGTGTTaGCTTATTTCCAGCCATAGCTGCAGCTGTCACTTT +
Preference number: 6 (lower is better)
Translates to: RCNHWADTSPGC*LISSHSCSCHF
Trigger: AAAGTGACAGCTGCAGCTATGGCTGGAAATAAGTCAACACCCAGGGCTAGTATCCGCCCAATGGTTACACCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS TCA 72 bp AAAGTGCCAGTGGATGTAGTCACCATTGGAACAGATTaGGAGGCATGTTCCGAAGCATCAGAGGTGGTGCTC +
Preference number: 6 (lower is better)
Translates to: KVPVDVVTIGTD*EACSEASEVVL
Trigger: GAGCACCACCTCTGATGCTTCGGAACATGCCTCTCAATCTGTTCCAATGGTGACTACATCCACTGGCACTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367478.9
ENST00000467810.1
CDS CCA 72 bp CTACTAGTATCTACAGATGAGCTAGAAGGAGGATCCTaGCTGGTGGAGGGGAGATCTGACTCATCAGATGCT +
Preference number: 6 (lower is better)
Translates to: LLVSTDELEGGS*LVEGRSDSSDA
Trigger: AGCATCTGATGAGTCAGATCTCCCCTCCACCAGCCAGGATCCTCCTTCTAGCTCATCTGTAGATACTAGTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS CAA 90 bp GCTGCAGCTGTCACTTTACTTGGAGTAGACACAACAGGAGTTGGCTaGATATTGGCTGTTGGTGGGTCTGATGTGCTGGCAATTCCTCTT +
Preference number: 6 (lower is better)
Translates to: AAAVTLLGVDTTGVG*ILAVGGSDVLAIPL
Trigger: AAGAGGAATTGCCAGCACATCAGACCCACCAACAGCCAATATCAAGCCAACTCCTGTTGTGTCTACTCCAAGTAAAGTGACAGCTGCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS GCA 72 bp GTTTGTGTAGTTCCTCTACTGCCCGGGTTAGTTCATTaGTCTTTGCTTCTGAGTCATCAGCGGCACTCTTGT +
Preference number: 6 (lower is better)
Translates to: VCVVPLLPGLVH*SLLLSHQRHSC
Trigger: ACAAGAGTGCCGCTGATGACTCAGAAGCAAAGAGCAATGAACTAACCCGGGCAGTAGAGGAACTACACAAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367478.9
ENST00000474852.1
ENST00000613151.1
CDS CCA 72 bp AAGCTGGCCAAGATCAGAGTGACTAGAACTTGTTTGTaGCATATCTTCAGGTGGCCCAAACCGGAATCTAGG +
Preference number: 6 (lower is better)
Translates to: KLAKIRVTRTCL*HIFRWPKPESR
Trigger: CCTAGATTCCGGTTTGGGCCACCTGAAGATATGCCACAAACAAGTTCTAGTCACTCTGATCTTGGCCAGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367478.9
ENST00000467810.1
CDS CAA 72 bp TTTCTCATGCCGCCCCTTCAGGCCATCGATCTCGGATaGCTGATCAGCAAGGAACTTTTCAAGTTTGTTCTG +
Preference number: 6 (lower is better)
Translates to: FLMPPLQAIDLG*LISKELFKFVL
Trigger: CAGAACAAACTTGAAAAGTTCCTTGCTGATCAGCAATCCGAGATCGATGGCCTGAAGGGGCGGCATGAGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000367478.9
ENST00000451586.1
ENST00000474852.1
ENST00000613151.1
CDS CAA 72 bp AGTTTGTGTAGTTCCTCTACTGCCCGGGTTAGTTCATaGCTCTTTGCTTCTGAGTCATCAGCGGCACTCTTG +
Preference number: 6 (lower is better)
Translates to: SLCSSSTARVSS*LFASESSAALL
Trigger: CAAGAGTGCCGCTGATGACTCAGAAGCAAAGAGCAATGAACTAACCCGGGCAGTAGAGGAACTACACAAACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367478.9
ENST00000474852.1
ENST00000613151.1
CDS CAA 72 bp CTGTCTCTGCTGTTCAGGGACCTTATTAGAAGGTTCTaGAGGCTCATCTCTCTGCTCAAGGTGTCTCTCTTG +
Preference number: 6 (lower is better)
Translates to: LSLLFRDLIRRF*RLISLLKVSLL
Trigger: CAAGAGAGACACCTTGAGCAGAGAGATGAGCCTCAAGAACCTTCTAATAAGGTCCCTGAACAGCAGAGACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS CAA 72 bp GTCACTTTACTTGGAGTAGACACAACAGGAGTTGGCTaGATATTGGCTGTTGGTGGGTCTGATGTGCTGGCA +
Preference number: 6 (lower is better)
Translates to: VTLLGVDTTGVG*ILAVGGSDVLA
Trigger: TGCCAGCACATCAGACCCACCAACAGCCAATATCAAGCCAACTCCTGTTGTGTCTACTCCAAGTAAAGTGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS CAA 72 bp CTCTTGATTGGCAGGCTCAATCTGAGGATGACTCTGTaGAGTGGGTTGCACAAAAGCTGTAGCCTGTGTTTG +
Preference number: 6 (lower is better)
Translates to: LLIGRLNLRMTL*SGLHKSCSLCL
Trigger: CAAACACAGGCTACAGCTTTTGTGCAACCCACTCAACAGAGTCATCCTCAGATTGAGCCTGCCAATCAAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS CAA 72 bp CATCATCTCCTTTGCCTTGACCATCCTGGGATGAAGTaGTCGTCTGCTGATCTGATTGAAGTGGCCCAAGAT +
Preference number: 6 (lower is better)
Translates to: HHLLCLDHPGMK*SSADLIEVAQD
Trigger: ATCTTGGGCCACTTCAATCAGATCAGCAGACGACAACTTCATCCCAGGATGGTCAAGGCAAAGGAGATGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS CAA 72 bp AGCAAGCTGGCCAAGATCAGAGTGACTAGAACTTGTTaGTGGCATATCTTCAGGTGGCCCAAACCGGAATCT +
Preference number: 6 (lower is better)
Translates to: SKLAKIRVTRTC*WHIFRWPKPES
Trigger: AGATTCCGGTTTGGGCCACCTGAAGATATGCCACAAACAAGTTCTAGTCACTCTGATCTTGGCCAGCTTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367478.9
ENST00000467810.1
CDS CAA 90 bp GCTGTCACTTTACTTGGAGTAGACACAACAGGAGTTGGCTTGATATaGGCTGTTGGTGGGTCTGATGTGCTGGCAATTCCTCTTTCACCA +
Preference number: 6 (lower is better)
Translates to: AVTLLGVDTTGVGLI*AVGGSDVLAIPLSP
Trigger: TGGTGAAAGAGGAATTGCCAGCACATCAGACCCACCAACAGCCAATATCAAGCCAACTCCTGTTGTGTCTACTCCAAGTAAAGTGACAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS CAA 90 bp ATGGCTCACACCTCTCTGTCTGTTAAACTGACGACCACGGACACCTaGTCTCAATGTTGTCTGAAGTCTTACTCGTCTGAAAGGCTTTGG +
Preference number: 6 (lower is better)
Translates to: MAHTSLSVKLTTTDT*SQCCLKSYSSERLW
Trigger: CCAAAGCCTTTCAGACGAGTAAGACTTCAGACAACATTGAGACAAGGTGTCCGTGGTCGTCAGTTTAACAGACAGAGAGGTGTGAGCCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS CAA 90 bp CACCTTAAATTTCTCATGCCGCCCCTTCAGGCCATCGATCTCGGATaGCTGATCAGCAAGGAACTTTTCAAGTTTGTTCTGGACAGACTT +
Preference number: 6 (lower is better)
Translates to: HLKFLMPPLQAIDLG*LISKELFKFVLDRL
Trigger: AAGTCTGTCCAGAACAAACTTGAAAAGTTCCTTGCTGATCAGCAATCCGAGATCGATGGCCTGAAGGGGCGGCATGAGAAATTTAAGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000367478.9
ENST00000451586.1
ENST00000474852.1
ENST00000613151.1
CDS CAA 90 bp ATTAGAAGGTTCTTGAGGCTCATCTCTCTGCTCAAGGTGTCTCTCTaGATGCTCCCTGAGTTCTCTTTCCAAGCGACTAATTCGACCTTC +
Preference number: 6 (lower is better)
Translates to: IRRFLRLISLLKVSL*MLPEFSFQATNSTF
Trigger: GAAGGTCGAATTAGTCGCTTGGAAAGAGAACTCAGGGAGCATCAAGAGAGACACCTTGAGCAGAGAGATGAGCCTCAAGAACCTTCTAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS TCA 72 bp CTGTTTAAGGGCAGCCTTAGCCTCTATAGCCTCTGTTaGTTCAATAACAGGTACTGGAGCAGGAGTGGAAAC +
Preference number: 6 (lower is better)
Translates to: LFKGSLSLYSLC*FNNRYWSRSGN
Trigger: GTTTCCACTCCTGCTCCAGTACCTGTTATTGAATCAACAGAGGCTATAGAGGCTAAGGCTGCCCTTAAACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367478.9
ENST00000474852.1
ENST00000491783.5
ENST00000613151.1
CDS GCA 72 bp CTGTATCATCAGAGACTTGGTCTGATGCTTCTATGGTaGTATCCTCTTCCTCTTCACGTGTACGCTTTGGCA +
Preference number: 6 (lower is better)
Translates to: LYHQRLGLMLLW*YPLPLHVYALA
Trigger: TGCCAAAGCGTACACGTGAAGAGGAAGAGGATAGCACCATAGAAGCATCAGACCAAGTCTCTGATGATACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS CCA 72 bp GCTACAGCTTTCTGTGCACGTTCATATTCCTCACGCTaGCGTTTCAAAATTGGTGCTTTGGCTTCCACTTCT +
Preference number: 6 (lower is better)
Translates to: ATAFCARSYSSR*RFKIGALASTS
Trigger: AGAAGTGGAAGCCAAAGCACCAATTTTGAAACGCCAGCGTGAGGAATATGAACGTGCACAGAAAGCTGTAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367478.9
ENST00000474852.1
ENST00000613151.1
CDS CAA 72 bp GTAGTTCCTCTACTGCCCGGGTTAGTTCATTGCTCTTaGCTTCTGAGTCATCAGCGGCACTCTTGTACAAAT +
Preference number: 6 (lower is better)
Translates to: VVPLLPGLVHCS*LLSHQRHSCTN
Trigger: ATTTGTACAAGAGTGCCGCTGATGACTCAGAAGCAAAGAGCAATGAACTAACCCGGGCAGTAGAGGAACTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367478.9
ENST00000474852.1
ENST00000613151.1
CDS CAA 72 bp TTCTTGAGGCTCATCTCTCTGCTCAAGGTGTCTCTCTaGATGCTCCCTGAGTTCTCTTTCCAAGCGACTAAT +
Preference number: 6 (lower is better)
Translates to: FLRLISLLKVSL*MLPEFSFQATN
Trigger: ATTAGTCGCTTGGAAAGAGAACTCAGGGAGCATCAAGAGAGACACCTTGAGCAGAGAGATGAGCCTCAAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS CAA 72 bp TTACTTGGAGTAGACACAACAGGAGTTGGCTTGATATaGGCTGTTGGTGGGTCTGATGTGCTGGCAATTCCT +
Preference number: 6 (lower is better)
Translates to: LLGVDTTGVGLI*AVGGSDVLAIP
Trigger: AGGAATTGCCAGCACATCAGACCCACCAACAGCCAATATCAAGCCAACTCCTGTTGTGTCTACTCCAAGTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS CAA 90 bp CTTTCTGTGTTGTTTCTTCCAAATGCTGACGGACTGATGCCATTTTaGAAACCTGCTCCTTCGCAGCTTGTAGAGCTTCAACATCAGCAG +
Preference number: 6 (lower is better)
Translates to: LSVLFLPNADGLMPF*KPAPSQLVELQHQQ
Trigger: CTGCTGATGTTGAAGCTCTACAAGCTGCGAAGGAGCAGGTTTCAAAAATGGCATCAGTCCGTCAGCATTTGGAAGAAACAACACAGAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS TCA 72 bp GACTTACTAGATGCTGGTTACGTGCTTTCCAACGTTTaGCATCCTCTTCTAAGAGCTTCTTCTCTGCCTGCA +
Preference number: 6 (lower is better)
Translates to: DLLDAGYVLSNV*HPLLRASSLPA
Trigger: TGCAGGCAGAGAAGAAGCTCTTAGAAGAGGATGTCAAACGTTGGAAAGCACGTAACCAGCATCTAGTAAGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367478.9
ENST00000481347.1
CDS TCA 72 bp CTGTGTGGTTCTATCTTGAAGATCCTGACGAAGTCGTaGAAGTTCAGACTGAAGTTGCACAGTCTGTTCCTG +
Preference number: 6 (lower is better)
Translates to: LCGSILKILTKS*KFRLKLHSLFL
Trigger: CAGGAACAGACTGTGCAACTTCAGTCTGAACTTTCACGACTTCGTCAGGATCTTCAAGATAGAACCACACAG
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS TCA 72 bp AAGAGGCATTTCCACTGTATCATCAGAGACTTGGTCTaGTGCTTCTATGGTGCTATCCTCTTCCTCTTCACG +
Preference number: 6 (lower is better)
Translates to: KRHFHCIIRDLV*CFYGAILFLFT
Trigger: CGTGAAGAGGAAGAGGATAGCACCATAGAAGCATCAGACCAAGTCTCTGATGATACAGTGGAAATGCCTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS GCA 72 bp CGTTTGACATCCTCTTCTAAGAGCTTCTTCTCTGCCTaGAACATACCGCTTTTCTCACTCAGCTCAGCATTT +
Preference number: 6 (lower is better)
Translates to: RLTSSSKSFFSA*NIPLFSLSSAF
Trigger: AAATGCTGAGCTGAGTGAGAAAAGCGGTATGTTGCAGGCAGAGAAGAAGCTCTTAGAAGAGGATGTCAAACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367478.9
ENST00000481347.1
CDS GCA 72 bp TACCTGAGTCTCTACCTCTCCATCAGTACTTTCTTCTaGCATAACTTCTTCCTCAGTTCCTACAGGTGTGAC +
Preference number: 6 (lower is better)
Translates to: YLSLYLSISTFF*HNFFLSSYRCD
Trigger: GTCACACCTGTAGGAACTGAGGAAGAAGTTATGGCAGAAGAAAGTACTGATGGAGAGGTAGAGACTCAGGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS CCA 72 bp TTTCAGTTATCTGTTGTCGGAGCTGCTCCTCCTGTGTaGTTCTATCTTGAAGATCCTGACGAAGTCGTGAAA +
Preference number: 6 (lower is better)
Translates to: FQLSVVGAAPPV*FYLEDPDEVVK
Trigger: TTTCACGACTTCGTCAGGATCTTCAAGATAGAACCACACAGGAGGAGCAGCTCCGACAACAGATAACTGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS CAA 72 bp TTTTCCTTCTTCACTGAGAGATACATTCAGTGGACCTaGTACACCTTCCTTCACAGAGGCAACGACCTTGTC +
Preference number: 6 (lower is better)
Translates to: FSFFTERYIQWT*YTFLHRGNDLV
Trigger: GACAAGGTCGTTGCCTCTGTGAAGGAAGGTGTACAAGGTCCACTGAATGTATCTCTCAGTGAAGAAGGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367478.9
ENST00000481347.1
CDS CAA 72 bp ACCTCTCTGTCTGTTAAACTGACGACCACGGACACCTaGTCTCAATGTTGTCTGAAGTCTTACTCGTCTGAA +
Preference number: 6 (lower is better)
Translates to: TSLSVKLTTTDT*SQCCLKSYSSE
Trigger: TTCAGACGAGTAAGACTTCAGACAACATTGAGACAAGGTGTCCGTGGTCGTCAGTTTAACAGACAGAGAGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS GCA 72 bp AGTCACGTCTGGCTTGCTGCTCATTACTTAAAGCTGTaGTTGCTCTCTGAAGAGCTTCTTGTACTTCATTCT +
Preference number: 6 (lower is better)
Translates to: SHVWLAAHYLKL*LLSEELLVLHS
Trigger: AGAATGAAGTACAAGAAGCTCTTCAGAGAGCAAGCACAGCTTTAAGTAATGAGCAGCAAGCCAGACGTGACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS CCA 72 bp TTTGGAAGAGGCATTTCCACTGTATCATCAGAGACTTaGTCTGATGCTTCTATGGTGCTATCCTCTTCCTCT +
Preference number: 6 (lower is better)
Translates to: FGRGISTVSSET*SDASMVLSSSS
Trigger: AGAGGAAGAGGATAGCACCATAGAAGCATCAGACCAAGTCTCTGATGATACAGTGGAAATGCCTCTTCCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS CAA 72 bp GTACTGGAGCAGGAGTGGAAACAGTCTGTGATGTACTaGGACGTTTTGGAGTTGATGCAAGAGAAACATCAT +
Preference number: 6 (lower is better)
Translates to: VLEQEWKQSVMY*DVLELMQEKHH
Trigger: ATGATGTTTCTCTTGCATCAACTCCAAAACGTCCAAGTACATCACAGACTGTTTCCACTCCTGCTCCAGTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367478.9
ENST00000474852.1
ENST00000491783.5
ENST00000613151.1
CDS CAA 72 bp TTGTTTCTTCCAAATGCTGACGGACTGATGCCATTTTaGAAACCTGCTCCTTCGCAGCTTGTAGAGCTTCAA +
Preference number: 6 (lower is better)
Translates to: LFLPNADGLMPF*KPAPSQLVELQ
Trigger: TTGAAGCTCTACAAGCTGCGAAGGAGCAGGTTTCAAAAATGGCATCAGTCCGTCAGCATTTGGAAGAAACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS CAA 72 bp ATAATCTCCCTGGGTAACTCCTTCTCCAATGGAATCTaGAGAATCCTGGTTGTATACCTGAGTCTCTACCTC +
Preference number: 6 (lower is better)
Translates to: IISLGNSFSNGI*RILVVYLSLYL
Trigger: GAGGTAGAGACTCAGGTATACAACCAGGATTCTCAAGATTCCATTGGAGAAGGAGTTACCCAGGGAGATTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS CAA 72 bp AAGCTTTGGGTGGTAGTGTGGGGTAAGGAGTCAAGCTaGTCTTATTATCATCCATTTCACTACCACAGCTTC +
Preference number: 6 (lower is better)
Translates to: KLWVVVWGKESS*SYYHPFHYHSF
Trigger: GAAGCTGTGGTAGTGAAATGGATGATAATAAGACAAGCTTGACTCCTTACCCCACACTACCACCCAAAGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481347.1
CDS CAA 90 bp CAGCTTTCTGTGCACGTTCATATTCCTCACGCTGGCGTTTCAAAATaGGTGCTTTGGCTTCCACTTCTTTCACTATTTCATCTAGGTACT +
Preference number: 6 (lower is better)
Translates to: QLSVHVHIPHAGVSK*VLWLPLLSLFHLGT
Trigger: AGTACCTAGATGAAATAGTGAAAGAAGTGGAAGCCAAAGCACCAATTTTGAAACGCCAGCGTGAGGAATATGAACGTGCACAGAAAGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367478.9
ENST00000474852.1
ENST00000613151.1
CDS CAA 90 bp GTACTGGAGCAGGAGTGGAAACAGTCTGTGATGTACTTGGACGTTTaGGAGTTGATGCAAGAGAAACATCATCTAAGCTTGAAGCATGTA +
Preference number: 6 (lower is better)
Translates to: VLEQEWKQSVMYLDV*ELMQEKHHLSLKHV
Trigger: TACATGCTTCAAGCTTAGATGATGTTTCTCTTGCATCAACTCCAAAACGTCCAAGTACATCACAGACTGTTTCCACTCCTGCTCCAGTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367478.9
ENST00000474852.1
ENST00000491783.5
ENST00000613151.1
CDS TCA 72 bp AGCGCAGTAATGCGAACATCCAATTCATCTTTCTGCTaGTCTAAGGCTCCATTCCTTTGTTTAAGCTCCTCA +
Preference number: 6 (lower is better)
Translates to: SAVMRTSNSSFC*SKAPFLCLSSS
Trigger: TGAGGAGCTTAAACAAAGGAATGGAGCCTTAGATCAGCAGAAAGATGAATTGGATGTTCGCATTACTGCGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS GCA 72 bp TCCATTCTTCGATTATCTCTCTCAAGTACAGATGATTaGTTGTTGGCTTTATCAGTGTCCTCCTGCAATCGC +
Preference number: 6 (lower is better)
Translates to: SILRLSLSSTDD*LLALSVSSCNR
Trigger: GCGATTGCAGGAGGACACTGATAAAGCCAACAAGCAATCATCTGTACTTGAGAGAGATAATCGAAGAATGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367478.9
ENST00000474852.1
ENST00000613151.1
CDS GCA 72 bp GCTTACTTCCTCATCACGAATTACGTGGTTACCCCTTaGTTCTTCAAGTTCCATCAAAAGCACTCTAATCTG +
Preference number: 6 (lower is better)
Translates to: AYFLITNYVVTP*FFKFHQKHSNL
Trigger: CAGATTAGAGTGCTTTTGATGGAACTTGAAGAAGCAAGGGGTAACCACGTAATTCGTGATGAGGAAGTAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367478.9
ENST00000474852.1
ENST00000613151.1
CDS CCA 72 bp TGCACGTTCATATTCCTCACGCTGGCGTTTCAAAATTaGTGCTTTGGCTTCCACTTCTTTCACTATTTCATC +
Preference number: 6 (lower is better)
Translates to: CTFIFLTLAFQN*CFGFHFFHYFI
Trigger: GATGAAATAGTGAAAGAAGTGGAAGCCAAAGCACCAATTTTGAAACGCCAGCGTGAGGAATATGAACGTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367478.9
ENST00000474852.1
ENST00000613151.1
CDS CCA 72 bp ATATCAGCAGAGCTTACTTCCTCATCACGAATTACGTaGTTACCCCTTGCTTCTTCAAGTTCCATCAAAAGC +
Preference number: 6 (lower is better)
Translates to: ISAELTSSSRIT*LPLASSSSIKS
Trigger: GCTTTTGATGGAACTTGAAGAAGCAAGGGGTAACCACGTAATTCGTGATGAGGAAGTAAGCTCTGCTGATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367478.9
ENST00000474852.1
ENST00000613151.1
CDS CCA 72 bp GAACAACCTCTACTATGTTTGAAGATAACTCTTGATTaGCAGGCTCAATCTGAGGATGACTCTGTTGAGTGG +
Preference number: 6 (lower is better)
Translates to: EQPLLCLKITLD*QAQSEDDSVEW
Trigger: CCACTCAACAGAGTCATCCTCAGATTGAGCCTGCCAATCAAGAGTTATCTTCAAACATAGTAGAGGTTGTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS CAA 72 bp ATTGCTTTGTTGGCTTCACCAGCTTCTTTCAAAAGTTaGTGTAGTTCCTCTACTGCCCGGGTTAGTTCATTG +
Preference number: 6 (lower is better)
Translates to: IALLASPASFKS*CSSSTARVSSL
Trigger: CAATGAACTAACCCGGGCAGTAGAGGAACTACACAAACTTTTGAAAGAAGCTGGTGAAGCCAACAAAGCAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367478.9
ENST00000474852.1
ENST00000613151.1
CDS CAA 72 bp GTGCACGTTCATATTCCTCACGCTGGCGTTTCAAAATaGGTGCTTTGGCTTCCACTTCTTTCACTATTTCAT +
Preference number: 6 (lower is better)
Translates to: VHVHIPHAGVSK*VLWLPLLSLFH
Trigger: ATGAAATAGTGAAAGAAGTGGAAGCCAAAGCACCAATTTTGAAACGCCAGCGTGAGGAATATGAACGTGCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367478.9
ENST00000474852.1
ENST00000613151.1
CDS CAA 72 bp CAGGAGTGGAAACAGTCTGTGATGTACTTGGACGTTTaGGAGTTGATGCAAGAGAAACATCATCTAAGCTTG +
Preference number: 6 (lower is better)
Translates to: QEWKQSVMYLDV*ELMQEKHHLSL
Trigger: CAAGCTTAGATGATGTTTCTCTTGCATCAACTCCAAAACGTCCAAGTACATCACAGACTGTTTCCACTCCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367478.9
ENST00000474852.1
ENST00000491783.5
ENST00000613151.1
CDS CAA 72 bp GCTCAACTGGTGAACTCTGAACAACCTCTACTATGTTaGAAGATAACTCTTGATTGGCAGGCTCAATCTGAG +
Preference number: 6 (lower is better)
Translates to: AQLVNSEQPLLC*KITLDWQAQSE
Trigger: CTCAGATTGAGCCTGCCAATCAAGAGTTATCTTCAAACATAGTAGAGGTTGTTCAGAGTTCACCAGTTGAGC
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS CAA 90 bp TCTTTCAAAAGTTTGTGTAGTTCCTCTACTGCCCGGGTTAGTTCATaGCTCTTTGCTTCTGAGTCATCAGCGGCACTCTTGTACAAATTA +
Preference number: 6 (lower is better)
Translates to: SFKSLCSSSTARVSS*LFASESSAALLYKL
Trigger: TAATTTGTACAAGAGTGCCGCTGATGACTCAGAAGCAAAGAGCAATGAACTAACCCGGGCAGTAGAGGAACTACACAAACTTTTGAAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367478.9
ENST00000474852.1
ENST00000613151.1
CDS CAA 90 bp GAGCAGGAGTGGAAACAGTCTGTGATGTACTTGGACGTTTTGGAGTaGATGCAAGAGAAACATCATCTAAGCTTGAAGCATGTAATGGAA +
Preference number: 6 (lower is better)
Translates to: EQEWKQSVMYLDVLE*MQEKHHLSLKHVME
Trigger: TTCCATTACATGCTTCAAGCTTAGATGATGTTTCTCTTGCATCAACTCCAAAACGTCCAAGTACATCACAGACTGTTTCCACTCCTGCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367478.9
ENST00000474852.1
ENST00000491783.5
ENST00000613151.1
CDS TCA 72 bp TGCCCCCTTTGTTCAGCTAACAAAGACTCTCTTTGCTaGGAAAGACGAACTTCAGACAATTTAAGCATTTCC +
Preference number: 6 (lower is better)
Translates to: CPLCSANKDSLC*ERRTSDNLSIS
Trigger: GGAAATGCTTAAATTGTCTGAAGTTCGTCTTTCTCAGCAAAGAGAGTCTTTGTTAGCTGAACAAAGGGGGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367478.9
ENST00000469463.1
ENST00000491783.5
CDS CCA 72 bp TTCGATTATCTCTCTCAAGTACAGATGATTGCTTGTTaGCTTTATCAGTGTCCTCCTGCAATCGCTGAATCT +
Preference number: 6 (lower is better)
Translates to: FDYLSQVQMIAC*LYQCPPAIAES
Trigger: AGATTCAGCGATTGCAGGAGGACACTGATAAAGCCAACAAGCAATCATCTGTACTTGAGAGAGATAATCGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367478.9
ENST00000474852.1
ENST00000613151.1
CDS CCA 72 bp AGTTCTCTTTCCAAGCGACTAATTCGACCTTCATATTaGGACTTTAGCGCAGTAATGCGAACATCCAATTCA +
Preference number: 6 (lower is better)
Translates to: SSLSKRLIRPSY*DFSAVMRTSNS
Trigger: TGAATTGGATGTTCGCATTACTGCGCTAAAGTCCCAATATGAAGGTCGAATTAGTCGCTTGGAAAGAGAACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS CAA 72 bp TCATATTCCTCACGCTGGCGTTTCAAAATTGGTGCTTaGGCTTCCACTTCTTTCACTATTTCATCTAGGTAC +
Preference number: 6 (lower is better)
Translates to: SYSSRWRFKIGA*ASTSFTISSRY
Trigger: GTACCTAGATGAAATAGTGAAAGAAGTGGAAGCCAAAGCACCAATTTTGAAACGCCAGCGTGAGGAATATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367478.9
ENST00000474852.1
ENST00000613151.1
CDS CAA 72 bp GATTTTGATTTTGTTTCAGCTTGGTTGAGCGTTTCTTaGAGTTCCTGCATTTCCTGGACTGAAACATGCTGC +
Preference number: 6 (lower is better)
Translates to: DFDFVSAWLSVS*SSCISWTETCC
Trigger: GCAGCATGTTTCAGTCCAGGAAATGCAGGAACTCAAAGAAACGCTCAACCAAGCTGAAACAAAATCAAAATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS CAA 90 bp CTCAACAATAAGCTTTGGGTGGTAGTGTGGGGTAAGGAGTCAAGCTaGTCTTATTATCATCCATTTCACTACCACAGCTTCTTTTCCTTT +
Preference number: 6 (lower is better)
Translates to: LNNKLWVVVWGKESS*SYYHPFHYHSFFSF
Trigger: AAAGGAAAAGAAGCTGTGGTAGTGAAATGGATGATAATAAGACAAGCTTGACTCCTTACCCCACACTACCACCCAAAGCTTATTGTTGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481347.1
CDS TCA 72 bp TGTTCTAGTTCAGTAAGGGCACTCTCAAGTTTGAGCTaGAGCTCAGTGATTTTGGATGAAGTTGTTTCTTGT +
Preference number: 6 (lower is better)
Translates to: CSSSVRALSSLS*SSVILDEVVSC
Trigger: ACAAGAAACAACTTCATCCAAAATCACTGAGCTTCAGCTCAAACTTGAGAGTGCCCTTACTGAACTAGAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367478.9
ENST00000474852.1
ENST00000613151.1
CDS TCA 72 bp TTTAAGTCATTCACCTGCTCTTCTGTCTGTCTTAGCTaGCTCACAAGATCATCCACATCTTCTTTGTTGCTA +
Preference number: 6 (lower is better)
Translates to: FKSFTCSSVCLS*LTRSSTSSLLL
Trigger: TAGCAACAAAGAAGATGTGGATGATCTTGTGAGTCAGCTAAGACAGACAGAAGAGCAGGTGAATGACTTAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS TCA 72 bp CAGCACCTAACAATCATAAATATAGTAGACTTTTTATaGGAGCACAACAGTCACAAAGCTAGAACAGGGGCC +
Preference number: 6 (lower is better)
Translates to: QHLTIINIVDFL*EHNSHKARTGA
Trigger: GGCCCCTGTTCTAGCTTTGTGACTGTTGTGCTCTCATAAAAAGTCTACTATATTTATGATTGTTAGGTGCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000492973.1
CDS GCA 72 bp TTGTTCTCTAGAAACCTCCTGAGAAAAAGAAGATTCTaGAGCACCTGTATTTCCTTCACCACTGTTTTGAGA +
Preference number: 6 (lower is better)
Translates to: LFSRNLLRKRRF*STCISFTTVLR
Trigger: TCTCAAAACAGTGGTGAAGGAAATACAGGTGCTGCAGAATCTTCTTTTTCTCAGGAGGTTTCTAGAGAACAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS CCA 72 bp GGGCATTTAATTCATTGTGGAATTTCTCTTCCATACTaGCCTGTTGTTCCTTGGCCTCTTTTAATTTGGTCA +
Preference number: 6 (lower is better)
Translates to: GHLIHCGISLPY*PVVPWPLLIWS
Trigger: TGACCAAATTAAAAGAGGCCAAGGAACAACAGGCCAGTATGGAAGAGAAATTCCACAATGAATTAAATGCCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367478.9
ENST00000474852.1
ENST00000613151.1
CDS CAA 90 bp TGTGCACGTTCATATTCCTCACGCTGGCGTTTCAAAATTGGTGCTTaGGCTTCCACTTCTTTCACTATTTCATCTAGGTACTTATTAATT +
Preference number: 6 (lower is better)
Translates to: CARSYSSRWRFKIGA*ASTSFTISSRYLLI
Trigger: AATTAATAAGTACCTAGATGAAATAGTGAAAGAAGTGGAAGCCAAAGCACCAATTTTGAAACGCCAGCGTGAGGAATATGAACGTGCACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367478.9
ENST00000474852.1
ENST00000613151.1
CDS CAA 90 bp TATAATCTATGTTACTTGTTGACTCTCTTCTTCCTGTATTTAAGGTaGGTTTCCCCCTATGAACTCATTCGTAGGCGGGCATTTTCTAGT +
Preference number: 6 (lower is better)
Translates to: YNLCYLLTLFFLYLR*VSPYELIRRRAFSS
Trigger: ACTAGAAAATGCCCGCCTACGAATGAGTTCATAGGGGGAAACCAACCTTAAATACAGGAAGAAGAGAGTCAACAAGTAACATAGATTATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000481347.1
CDS CCA 72 bp ACAATAAAATACGGTACATATCACGCTGACGAACTATaGAATCAACAAGCTGCATTTGATGCTGTCGTGATT +
Preference number: 6 (lower is better)
Translates to: TIKYGTYHADEL*NQQAAFDAVVI
Trigger: AATCACGACAGCATCAAATGCAGCTTGTTGATTCCATAGTTCGTCAGCGTGATATGTACCGTATTTTATTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367478.9
ENST00000474852.1
ENST00000491783.5
ENST00000613151.1
CDS CAA 72 bp CTAAGCTTGAAGCATGTAATGGAATGGCAACTCCTGTaGTTTGTGACAATAAAATACGGTACATATCACGCT +
Preference number: 6 (lower is better)
Translates to: LSLKHVMEWQLL*FVTIKYGTYHA
Trigger: AGCGTGATATGTACCGTATTTTATTGTCACAAACAACAGGAGTTGCCATTCCATTACATGCTTCAAGCTTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367478.9
ENST00000474852.1
ENST00000491783.5
ENST00000613151.1
CDS CAA 90 bp AAACATCATCTAAGCTTGAAGCATGTAATGGAATGGCAACTCCTGTaGTTTGTGACAATAAAATACGGTACATATCACGCTGACGAACTA +
Preference number: 6 (lower is better)
Translates to: KHHLSLKHVMEWQLL*FVTIKYGTYHADEL
Trigger: TAGTTCGTCAGCGTGATATGTACCGTATTTTATTGTCACAAACAACAGGAGTTGCCATTCCATTACATGCTTCAAGCTTAGATGATGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367478.9
ENST00000474852.1
ENST00000491783.5
ENST00000613151.1
CDS CAA 90 bp ATTTGCTCCTCTCAAATCTTGAGTCATCGTATTGATAATCTGTTCTaGCTTTTGAGTTGTGGCAGTGAGTTTCTGATTTCTCTCATGAAG +
Preference number: 6 (lower is better)
Translates to: ICSSQILSHRIDNLF*LLSCGSEFLISLMK
Trigger: CTTCATGAGAGAAATCAGAAACTCACTGCCACAACTCAAAAGCAAGAACAGATTATCAATACGATGACTCAAGATTTGAGAGGAGCAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367478.9
ENST00000469463.1
ENST00000474852.1
ENST00000491783.5
CDS CCA 72 bp TTAACAAGTGCTTTCTTAAAGCTTAGTATACCTACCTaGACTTTCTCCCTTTCAGCATTTAGACTATCTTGC +
Preference number: 6 (lower is better)
Translates to: LTSAFLKLSIPT*TFSLSAFRLSC
Trigger: GCAAGATAGTCTAAATGCTGAAAGGGAGAAAGTCCAGGTAGGTATACTAAGCTTTAAGAAAGCACTTGTTAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481347.1
CDS CAA 72 bp ATCTTGAGTCATCGTATTGATAATCTGTTCTTGCTTTaGAGTTGTGGCAGTGAGTTTCTGATTTCTCTCATG +
Preference number: 6 (lower is better)
Translates to: ILSHRIDNLFLL*SCGSEFLISLM
Trigger: CATGAGAGAAATCAGAAACTCACTGCCACAACTCAAAAGCAAGAACAGATTATCAATACGATGACTCAAGAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367478.9
ENST00000469463.1
ENST00000474852.1
ENST00000491783.5
CDS TCA 72 bp TTGTTCAGGGATTCTTCTAAACTAGTAACCATTGCTTaGTATTGTTCCACATTGCTCGTACTTGTTTTGAGT +
Preference number: 6 (lower is better)
Translates to: LFRDSSKLVTIA*YCSTLLVLVLS
Trigger: ACTCAAAACAAGTACGAGCAATGTGGAACAATATCAAGCAATGGTTACTAGTTTAGAAGAATCCCTGAACAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367478.9
CDS GCA 72 bp ATTAAGCACCCACTACATACCAGACATGCTTCTAAATaGTTCATGTGCACAAACTCAATTAAACCTCATTAT +
Preference number: 6 (lower is better)
Translates to: IKHPLHTRHASK*FMCTNSIKPHY
Trigger: ATAATGAGGTTTAATTGAGTTTGTGCACATGAAGCATTTAGAAGCATGTCTGGTATGTAGTGGGTGCTTAAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481347.1
CDS GCA 72 bp CCACTACATACCAGACATGCTTCTAAATGCTTCATGTaGACAAACTCAATTAAACCTCATTATTATCCAAAT +
Preference number: 6 (lower is better)
Translates to: PLHTRHASKCFM*TNSIKPHYYPN
Trigger: ATTTGGATAATAATGAGGTTTAATTGAGTTTGTGCACATGAAGCATTTAGAAGCATGTCTGGTATGTAGTGG
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481347.1
CDS CAA 72 bp TGTTCTAGTCTCTCCTTCTCTTCTCTTAGCATTTTATaGGTCTCCATAACTACATTCATTGTTTCAGTTTTC +
Preference number: 6 (lower is better)
Translates to: CSSLSFSSLSIL*VSITTFIVSVF
Trigger: GAAAACTGAAACAATGAATGTAGTTATGGAGACCAATAAAATGCTAAGAGAAGAGAAGGAGAGACTAGAACA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367478.9
ENST00000481347.1