RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TPPP3 (Homo sapiens)

Ensembl gene IDs: ENSG00000159713

Ensembl transcript IDs: ENST00000290942.9, ENST00000393957.7, ENST00000561537.1, ENST00000562206.1, ENST00000564104.5

Found 343 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR CCA 90 bp AGGTCCAGCAGGGAGGGGACCAGGATCTCTTGCTCCACGTGCCCCTTAGACCCAAGGGGCAGCCGCACTTaGCAGGGCGGTCTTCCCAAG +
Preference number: 2 (lower is better)
Translates to: RSSREGTRISCSTCPLDPRGSRT*QGGLPK
Trigger: CTTGGGAAGACCGCCCTGCCAAGTGCGGCTGCCCCT...TGGGTCTAAGGGGCACGTGGAGCAAGAGATCCTGGTCCCCTCCCTGCTGGACCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000290942.9
ENST00000393957.7
ENST00000562206.1
ENST00000564104.5
3UTR-3UTR CCA 90 bp GAGGCTACAGGCACAGACTGTCCCCAGGTGGACAGAAGTTGGAGCAGGAAGAGGGGCCGCAGAGCAGCCTaGGTCAGAGGCCTGGTGGGC +
Preference number: 2 (lower is better)
Translates to: EATGTDCPQVDRSWSRKRGRRAA*VRGLVG
Trigger: GCCCACCAGGCCTCTGACCCAGGCTGCTCTGCGGCC...CCTCTTCCTGCTCCAACTTCTGTCCACCTGGGGACAGTCTGTGCCTGTAGCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290942.9
ENST00000393957.7
ENST00000562206.1
ENST00000564104.5
3UTR-3UTR CCA 90 bp CTGGGTTGGGGTCATGAGGCTACAGGCACAGACTGTCCCCAGGTGGACAGAAGTAGGGGCAGCCGCACTTaGCAGGGCGGTCTTCCCAAG +
Preference number: 2 (lower is better)
Translates to: LGWGHEATGTDCPQVDRSRGSRT*QGGLPK
Trigger: CTTGGGAAGACCGCCCTGCCAAGTGCGGCTGCCCCT...ACTTCTGTCCACCTGGGGACAGTCTGTGCCTGTAGCCTCATGACCCCAACCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000290942.9
ENST00000393957.7
ENST00000562206.1
ENST00000564104.5
3UTR-3UTR CCA 90 bp GGCTACAGGCACAGACTGTCCCCAGGTGGACAGAAGTTGGAGCAGGAAGAGGAGGCAGGAAGCTCTGGGTaGCAGGTCCAGCAGGGAGGG +
Preference number: 2 (lower is better)
Translates to: GYRHRLSPGGQKLEQEEEAGSSG*QVQQGG
Trigger: CCCTCCCTGCTGGACCTGCCACCCAGAGCTTCCTGC...CTCCTCTTCCTGCTCCAACTTCTGTCCACCTGGGGACAGTCTGTGCCTGTAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290942.9
ENST00000393957.7
ENST00000562206.1
ENST00000564104.5
3UTR-3UTR CCA 90 bp AGGCTACAGGCACAGACTGTCCCCAGGTGGACAGAAGTTGGAGCAGGAAGAGGAAGGGGCAGCCGCACTTaGCAGGGCGGTCTTCCCAAG +
Preference number: 2 (lower is better)
Translates to: RLQAQTVPRWTEVGAGRGRGSRT*QGGLPK
Trigger: CTTGGGAAGACCGCCCTGCCAAGTGCGGCTGCCCCT...TCCTCTTCCTGCTCCAACTTCTGTCCACCTGGGGACAGTCTGTGCCTGTAGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290942.9
ENST00000393957.7
ENST00000562206.1
ENST00000564104.5
3UTR-3UTR CCA 90 bp GAGCAGCAGCTTAAATATGAGGCAAGCAGTCAGGGGTTAGCCATGCCTGGGGCTCCAGGCCTGAGCCTCTaGCAGGGGCAGCCGCACTTG +
Preference number: 2 (lower is better)
Translates to: EQQLKYEASSQGLAMPGAPGLSL*QGQPHL
Trigger: CAAGTGCGGCTGCCCCTGCCAGAGGCTCAGGCCTGG...AGCCCCAGGCATGGCTAACCCCTGACTGCTTGCCTCATATTTAAGCTGCTGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000290942.9
ENST00000393957.7
ENST00000562206.1
ENST00000564104.5
3UTR-3UTR GCA 90 bp GCTACAGGCACAGACTGTCCCCAGGTGGACAGAAGTTGGAGCAGGAAGAGGAGGGGGACCAGGATCTCTTaGTCCACGTGCCCCTTAGAC +
Preference number: 2 (lower is better)
Translates to: ATGTDCPQVDRSWSRKRRGTRIS*STCPLD
Trigger: GTCTAAGGGGCACGTGGAGCAAGAGATCCTGGTCCC...CCTCCTCTTCCTGCTCCAACTTCTGTCCACCTGGGGACAGTCTGTGCCTGTAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000290942.9
ENST00000393957.7
ENST00000562206.1
ENST00000564104.5
3UTR-3UTR GCA 90 bp TGGCCAGAGCAGCAGCTTAAATATGAGGCAAGCAGTCAGGGGTTAGCCATGCCTGGGACCAGGATCTCTTaGTCCACGTGCCCCTTAGAC +
Preference number: 2 (lower is better)
Translates to: WPEQQLKYEASSQGLAMPGTRIS*STCPLD
Trigger: GTCTAAGGGGCACGTGGAGCAAGAGATCCTGGTCCC...AGGCATGGCTAACCCCTGACTGCTTGCCTCATATTTAAGCTGCTGCTCTGGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290942.9
ENST00000393957.7
ENST00000562206.1
ENST00000564104.5
3UTR-3UTR CCA 90 bp GGCACTTGGCCAGAGCAGCAGCTTAAATATGAGGCAAGCAGTCAGGGGTTAGCCCAGACTGTCCCCAGGTaGACAGAAGTTGGAGCAGGA +
Preference number: 2 (lower is better)
Translates to: GTWPEQQLKYEASSQGLAQTVPR*TEVGAG
Trigger: TCCTGCTCCAACTTCTGTCCACCTGGGGACAGTCTG...GGCTAACCCCTGACTGCTTGCCTCATATTTAAGCTGCTGCTCTGGCCAAGTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290942.9
ENST00000393957.7
ENST00000562206.1
ENST00000564104.5
3UTR-3UTR CCA 90 bp TTATTGAGGTCTGGGTTAAAATTAGGCACTTGGCCAGAGCAGCAGCTTAAATATAGGGGCAGCCGCACTTaGCAGGGCGGTCTTCCCAAG +
Preference number: 2 (lower is better)
Translates to: LLRSGLKLGTWPEQQLKYRGSRT*QGGLPK
Trigger: CTTGGGAAGACCGCCCTGCCAAGTGCGGCTGCCCCT...ATATTTAAGCTGCTGCTCTGGCCAAGTGCCTAATTTTAACCCAGACCTCAATAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290942.9
ENST00000393957.7
ENST00000564104.5
3UTR-3UTR CCA 90 bp TTATTGAGGTCTGGGTTAAAATTAGGCACTTGGCCAGAGCAGCAGCTTAAATATGCAGGAAGCTCTGGGTaGCAGGTCCAGCAGGGAGGG +
Preference number: 2 (lower is better)
Translates to: LLRSGLKLGTWPEQQLKYAGSSG*QVQQGG
Trigger: CCCTCCCTGCTGGACCTGCCACCCAGAGCTTCCTGC...ATATTTAAGCTGCTGCTCTGGCCAAGTGCCTAATTTTAACCCAGACCTCAATAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290942.9
ENST00000393957.7
ENST00000564104.5
3UTR-3UTR CAA 90 bp GAGGCTACAGGCACAGACTGTCCCCAGGTGGACAGAAGTTGGAGCAGGAAGAGGGGGGACCAGGATCTCTaGCTCCACGTGCCCCTTAGA +
Preference number: 3 (lower is better)
Translates to: EATGTDCPQVDRSWSRKRGDQDL*LHVPLR
Trigger: TCTAAGGGGCACGTGGAGCAAGAGATCCTGGTCCCC...CCTCTTCCTGCTCCAACTTCTGTCCACCTGGGGACAGTCTGTGCCTGTAGCCTC
60% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000290942.9
ENST00000393957.7
ENST00000562206.1
ENST00000564104.5
CDS-3UTR GCA 90 bp CAGCAGGGAGGGGACCAGGATCTCTTGCTCCACGTGCCCCTTAGACCCAGGCCTCAGGTGGCGCTGGGTTaGAGGCCGCAGCCCCATGGG +
Preference number: 4 (lower is better)
Translates to: QQGGDQDLLLHVPLRPRPQVALG*RPQPHG
Trigger: CCCATGGGGCTGCGGCCTGCAACCCAGCGCCACCTG...AGGCCTGGGTCTAAGGGGCACGTGGAGCAAGAGATCCTGGTCCCCTCCCTGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000562206.1
CDS-3UTR GCA 90 bp AGCAGGGAGGGGACCAGGATCTCTTGCTCCACGTGCCCCTTAGACCCAGGCCTGGGGGCCAGGCCAGGCTaGTGGTCGGGCAGGCATTCA +
Preference number: 4 (lower is better)
Translates to: SREGTRISCSTCPLDPGLGARPG*WSGRHS
Trigger: TGAATGCCTGCCCGACCAGCAGCCTGGCCTGGCCCC...CAGGCCTGGGTCTAAGGGGCACGTGGAGCAAGAGATCCTGGTCCCCTCCCTGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000564104.5
CDS-3UTR CCA 90 bp AGCAGGGAGGGGACCAGGATCTCTTGCTCCACGTGCCCCTTAGACCCAGGCCTGCCAGGCCTGAGCCTCTaGCAGGGGCAGCCGCACTTG +
Preference number: 4 (lower is better)
Translates to: SREGTRISCSTCPLDPGLPGLSL*QGQPHL
Trigger: CAAGTGCGGCTGCCCCTGCCAGAGGCTCAGGCCTGG...CAGGCCTGGGTCTAAGGGGCACGTGGAGCAAGAGATCCTGGTCCCCTCCCTGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000290942.9
ENST00000393957.7
ENST00000562206.1
ENST00000564104.5
CDS-3UTR CCA 90 bp GGCTGGGTTGGGGTCATGAGGCTACAGGCACAGACTGTCCCCAGGTGGACAGAAGCTGGGCTGGGAAGCTaGGGCCCACGGGTGGGGCAC +
Preference number: 4 (lower is better)
Translates to: GWVGVMRLQAQTVPRWTEAGLGS*GPRVGH
Trigger: GTGCCCCACCCGTGGGCCCCAGCTTCCCAGCCCAGC...TTCTGTCCACCTGGGGACAGTCTGTGCCTGTAGCCTCATGACCCCAACCCAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000564104.5
CDS-3UTR GCA 90 bp GCTACAGGCACAGACTGTCCCCAGGTGGACAGAAGTTGGAGCAGGAAGAGGAGGCGCAGCTCCGCTCCCTaGCGGCTCCCGGGTGGGACT +
Preference number: 4 (lower is better)
Translates to: ATGTDCPQVDRSWSRKRRRSSAP*RLPGGT
Trigger: AGTCCCACCCGGGAGCCGGCAGGGAGCGGAGCTGCG...CCTCCTCTTCCTGCTCCAACTTCTGTCCACCTGGGGACAGTCTGTGCCTGTAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290942.9
ENST00000393957.7
CDS-3UTR GCA 90 bp GGCTACAGGCACAGACTGTCCCCAGGTGGACAGAAGTTGGAGCAGGAAGAGGAGCGCAGCTCCGCTCCCTaGCGGCTCCCGGGTGGGACT +
Preference number: 4 (lower is better)
Translates to: GYRHRLSPGGQKLEQEEERSSAP*RLPGGT
Trigger: AGTCCCACCCGGGAGCCGGCAGGGAGCGGAGCTGCG...CTCCTCTTCCTGCTCCAACTTCTGTCCACCTGGGGACAGTCTGTGCCTGTAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290942.9
ENST00000393957.7
CDS-3UTR CCA 90 bp CAGCAGGGAGGGGACCAGGATCTCTTGCTCCACGTGCCCCTTAGACCCAGGCCTGCAGGAAGCTCTGGGTaGCAGGTCCAGCAGGGAGGG +
Preference number: 4 (lower is better)
Translates to: QQGGDQDLLLHVPLRPRPAGSSG*QVQQGG
Trigger: CCCTCCCTGCTGGACCTGCCACCCAGAGCTTCCTGC...AGGCCTGGGTCTAAGGGGCACGTGGAGCAAGAGATCCTGGTCCCCTCCCTGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290942.9
ENST00000393957.7
ENST00000562206.1
ENST00000564104.5
CDS-3UTR CCA 90 bp CTGGGTTGGGGTCATGAGGCTACAGGCACAGACTGTCCCCAGGTGGACAGAAGTGCGGTCAGGTGGCGCTaGGTTGCAGGCCGCAGCCCC +
Preference number: 4 (lower is better)
Translates to: LGWGHEATGTDCPQVDRSAVRWR*VAGRSP
Trigger: GGGGCTGCGGCCTGCAACCCAGCGCCACCTGACCGC...ACTTCTGTCCACCTGGGGACAGTCTGTGCCTGTAGCCTCATGACCCCAACCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562206.1
CDS-3UTR TCA 90 bp GTCCAGCAGGGAGGGGACCAGGATCTCTTGCTCCACGTGCCCCTTAGACCCAGGTTGCTTGGGTGGAAGTaGGGGTGGCAGAGCAGGCCC +
Preference number: 4 (lower is better)
Translates to: VQQGGDQDLLLHVPLRPRLLGWK*GWQSRP
Trigger: GGGCCTGCTCTGCCACCCTCACTTCCACCCAAGCAA...CCTGGGTCTAAGGGGCACGTGGAGCAAGAGATCCTGGTCCCCTCCCTGCTGGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000564104.5
CDS-3UTR GCA 90 bp AGCAGGGAGGGGACCAGGATCTCTTGCTCCACGTGCCCCTTAGACCCAGGCCTGCATGTCTGTGCTCGCTaGCATGCCACCCTCGCGGCT +
Preference number: 4 (lower is better)
Translates to: SREGTRISCSTCPLDPGLHVCAR*HATLAA
Trigger: AGCCGCGAGGGTGGCATGGCAGCGAGCACAGACATG...CAGGCCTGGGTCTAAGGGGCACGTGGAGCAAGAGATCCTGGTCCCCTCCCTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393957.7
CDS-3UTR CCA 90 bp AGGTCCAGCAGGGAGGGGACCAGGATCTCTTGCTCCACGTGCCCCTTAGACCCAGCAGGAATGGACCGATaGACGCGGGAGACCAGGCGG +
Preference number: 4 (lower is better)
Translates to: RSSREGTRISCSTCPLDPAGMDR*TRETRR
Trigger: CCGCCTGGTCTCCCGCGTCCATCGGTCCATTCCTGC...TGGGTCTAAGGGGCACGTGGAGCAAGAGATCCTGGTCCCCTCCCTGCTGGACCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290942.9
ENST00000393957.7
ENST00000562206.1
CDS-3UTR CCA 90 bp GTCCAGCAGGGAGGGGACCAGGATCTCTTGCTCCACGTGCCCCTTAGACCCAGGGGGGTTAGCCATGCCTaGGGCTGGGTTGGGGTCATG +
Preference number: 4 (lower is better)
Translates to: VQQGGDQDLLLHVPLRPRGVSHA*GWVGVM
Trigger: CATGACCCCAACCCAGCCCCAGGCATGGCTAACCCC...CCTGGGTCTAAGGGGCACGTGGAGCAAGAGATCCTGGTCCCCTCCCTGCTGGAC
64% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000290942.9
ENST00000393957.7
ENST00000562206.1
ENST00000564104.5
CDS-3UTR CCA 90 bp CAGCAGGGAGGGGACCAGGATCTCTTGCTCCACGTGCCCCTTAGACCCAGGCCTGGGGTTAGCCATGCCTaGGGCTGGGTTGGGGTCATG +
Preference number: 4 (lower is better)
Translates to: QQGGDQDLLLHVPLRPRPGVSHA*GWVGVM
Trigger: CATGACCCCAACCCAGCCCCAGGCATGGCTAACCCC...AGGCCTGGGTCTAAGGGGCACGTGGAGCAAGAGATCCTGGTCCCCTCCCTGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000290942.9
ENST00000393957.7
ENST00000562206.1
ENST00000564104.5
CDS-3UTR CCA 90 bp TGGCAGGTCCAGCAGGGAGGGGACCAGGATCTCTTGCTCCACGTGCCCCTTAGACAGGCCGCAGCCCCATaGGTCTGCAGGCCATGGATG +
Preference number: 4 (lower is better)
Translates to: WQVQQGGDQDLLLHVPLRQAAAP*VCRPWM
Trigger: CATCCATGGCCTGCAGACCCATGGGGCTGCGGCCTG...TCTAAGGGGCACGTGGAGCAAGAGATCCTGGTCCCCTCCCTGCTGGACCTGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000562206.1
CDS-3UTR CCA 90 bp GAGGCTACAGGCACAGACTGTCCCCAGGTGGACAGAAGTTGGAGCAGGAAGAGGCTCAGCGCGGTCAGGTaGCGCTGGGTTGCAGGCCGC +
Preference number: 4 (lower is better)
Translates to: EATGTDCPQVDRSWSRKRLSAVR*RWVAGR
Trigger: GCGGCCTGCAACCCAGCGCCACCTGACCGCGCTGAG...CCTCTTCCTGCTCCAACTTCTGTCCACCTGGGGACAGTCTGTGCCTGTAGCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562206.1
CDS-3UTR CCA 90 bp AGCAGGGAGGGGACCAGGATCTCTTGCTCCACGTGCCCCTTAGACCCAGGCCTGAGCAGGCCCCCTCCCTaGAAGCTCCATGCCAAGCTG +
Preference number: 4 (lower is better)
Translates to: SREGTRISCSTCPLDPGLSRPPP*KLHAKL
Trigger: CAGCTTGGCATGGAGCTTCCAGGGAGGGGGCCTGCT...CAGGCCTGGGTCTAAGGGGCACGTGGAGCAAGAGATCCTGGTCCCCTCCCTGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000564104.5
CDS-3UTR TCA 90 bp TGGCAGGTCCAGCAGGGAGGGGACCAGGATCTCTTGCTCCACGTGCCCCTTAGACCTCGCGGCTGCTCCTaGAGTGTGCGTTCGGAAGGA +
Preference number: 4 (lower is better)
Translates to: WQVQQGGDQDLLLHVPLRPRGCS*SVRSEG
Trigger: TCCTTCCGAACGCACACTTCAGGAGCAGCCGCGAGG...TCTAAGGGGCACGTGGAGCAAGAGATCCTGGTCCCCTCCCTGCTGGACCTGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290942.9
ENST00000393957.7
ENST00000562206.1
CDS-3UTR TCA 90 bp GCTACAGGCACAGACTGTCCCCAGGTGGACAGAAGTTGGAGCAGGAAGAGGAGGGAGTGGCCACACCCGTaGACTGGAGCCACCCGTCCC +
Preference number: 4 (lower is better)
Translates to: ATGTDCPQVDRSWSRKRREWPHP*TGATRP
Trigger: GGGACGGGTGGCTCCAGTTCACGGGTGTGGCCACTC...CCTCCTCTTCCTGCTCCAACTTCTGTCCACCTGGGGACAGTCTGTGCCTGTAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562206.1
CDS-3UTR GCA 90 bp TGGCAGGTCCAGCAGGGAGGGGACCAGGATCTCTTGCTCCACGTGCCCCTTAGAGGATCCTGCGTGCAGTaGTCACTCCTCGCGGCTGCT +
Preference number: 4 (lower is better)
Translates to: WQVQQGGDQDLLLHVPLRGSCVQ*SLLAAA
Trigger: AGCAGCCGCGAGGAGTGAGCACTGCACGCAGGATCC...TCTAAGGGGCACGTGGAGCAAGAGATCCTGGTCCCCTCCCTGCTGGACCTGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290942.9
CDS-3UTR GCA 90 bp AGCAGGGAGGGGACCAGGATCTCTTGCTCCACGTGCCCCTTAGACCCAGGCCTGTTGGATGCCACAGGGTaGTTGGCCCAAGCACTGGGC +
Preference number: 4 (lower is better)
Translates to: SREGTRISCSTCPLDPGLLDATG*LAQALG
Trigger: GCCCAGTGCTTGGGCCAAGCACCCTGTGGCATCCAA...CAGGCCTGGGTCTAAGGGGCACGTGGAGCAAGAGATCCTGGTCCCCTCCCTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290942.9
ENST00000562206.1
CDS-3UTR GCA 90 bp TGGCAGGTCCAGCAGGGAGGGGACCAGGATCTCTTGCTCCACGTGCCCCTTAGACCAGGGGAGCTTGGATaGCACAGGGTGCTTGGCCCA +
Preference number: 4 (lower is better)
Translates to: WQVQQGGDQDLLLHVPLRPGELG*HRVLGP
Trigger: TGGGCCAAGCACCCTGTGGCATCCAAGCTCCCCTGG...TCTAAGGGGCACGTGGAGCAAGAGATCCTGGTCCCCTCCCTGCTGGACCTGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000290942.9
ENST00000562206.1
CDS-3UTR GCA 90 bp AGGTCCAGCAGGGAGGGGACCAGGATCTCTTGCTCCACGTGCCCCTTAGACCCAGCAGCCCCATGGGTCTaGAGGCCATGGATGGAGTGG +
Preference number: 4 (lower is better)
Translates to: RSSREGTRISCSTCPLDPAAPWV*RPWMEW
Trigger: CCACTCCATCCATGGCCTGCAGACCCATGGGGCTGC...TGGGTCTAAGGGGCACGTGGAGCAAGAGATCCTGGTCCCCTCCCTGCTGGACCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000562206.1
CDS-3UTR GCA 90 bp AGGTCCAGCAGGGAGGGGACCAGGATCTCTTGCTCCACGTGCCCCTTAGACCCAGCACTGGGCGGATCCTaGGTGCAGTGCTCACTCCTG +
Preference number: 4 (lower is better)
Translates to: RSSREGTRISCSTCPLDPALGGS*VQCSLL
Trigger: CAGGAGTGAGCACTGCACGCAGGATCCGCCCAGTGC...TGGGTCTAAGGGGCACGTGGAGCAAGAGATCCTGGTCCCCTCCCTGCTGGACCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562206.1
CDS-3UTR CCA 90 bp AGGTCCAGCAGGGAGGGGACCAGGATCTCTTGCTCCACGTGCCCCTTAGACCCAGCTTGGCCCAAGCACTaGGCGGATCCTGCGTGCAGT +
Preference number: 4 (lower is better)
Translates to: RSSREGTRISCSTCPLDPAWPKH*ADPACS
Trigger: ACTGCACGCAGGATCCGCCCAGTGCTTGGGCCAAGC...TGGGTCTAAGGGGCACGTGGAGCAAGAGATCCTGGTCCCCTCCCTGCTGGACCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290942.9
ENST00000562206.1
CDS-3UTR CCA 90 bp GTCCAGCAGGGAGGGGACCAGGATCTCTTGCTCCACGTGCCCCTTAGACCCAGGACGTCCAGGGGAGCTTaGATGCCACAGGGTGCTTGG +
Preference number: 4 (lower is better)
Translates to: VQQGGDQDLLLHVPLRPRTSRGA*MPQGAW
Trigger: CCAAGCACCCTGTGGCATCCAAGCTCCCCTGGACGT...CCTGGGTCTAAGGGGCACGTGGAGCAAGAGATCCTGGTCCCCTCCCTGCTGGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000290942.9
ENST00000562206.1
CDS-3UTR CCA 90 bp AGCAGGGAGGGGACCAGGATCTCTTGCTCCACGTGCCCCTTAGACCCAGGCCTGCCACCAGCTGGCAGATaGCATCGAAGGCCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: SREGTRISCSTCPLDPGLPPAGR*HRRPPP
Trigger: AGGAGGAGGCCTTCGATGCCATCTGCCAGCTGGTGG...CAGGCCTGGGTCTAAGGGGCACGTGGAGCAAGAGATCCTGGTCCCCTCCCTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290942.9
ENST00000393957.7
ENST00000562206.1
ENST00000564104.5
CDS-3UTR CCA 90 bp GGCTGGGTTGGGGTCATGAGGCTACAGGCACAGACTGTCCCCAGGTGGACAGAAAGGGGCAGCCGCACTTaGCAGGGCGGTCTTCCCAAG +
Preference number: 4 (lower is better)
Translates to: GWVGVMRLQAQTVPRWTERGSRT*QGGLPK
Trigger: CTTGGGAAGACCGCCCTGCCAAGTGCGGCTGCCCCT...TTCTGTCCACCTGGGGACAGTCTGTGCCTGTAGCCTCATGACCCCAACCCAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000290942.9
ENST00000393957.7
ENST00000562206.1
ENST00000564104.5
CDS-3UTR CCA 90 bp GCTACAGGCACAGACTGTCCCCAGGTGGACAGAAGTTGGAGCAGGAAGAGGAGGCCAGGCCTGAGCCTCTaGCAGGGGCAGCCGCACTTG +
Preference number: 4 (lower is better)
Translates to: ATGTDCPQVDRSWSRKRRPGLSL*QGQPHL
Trigger: CAAGTGCGGCTGCCCCTGCCAGAGGCTCAGGCCTGG...CCTCCTCTTCCTGCTCCAACTTCTGTCCACCTGGGGACAGTCTGTGCCTGTAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290942.9
ENST00000393957.7
ENST00000562206.1
ENST00000564104.5
CDS-3UTR CCA 90 bp AGGTCCAGCAGGGAGGGGACCAGGATCTCTTGCTCCACGTGCCCCTTAGACCCAGGGGTTAGCCATGCCTaGGGCTGGGTTGGGGTCATG +
Preference number: 4 (lower is better)
Translates to: RSSREGTRISCSTCPLDPGVSHA*GWVGVM
Trigger: CATGACCCCAACCCAGCCCCAGGCATGGCTAACCCC...TGGGTCTAAGGGGCACGTGGAGCAAGAGATCCTGGTCCCCTCCCTGCTGGACCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000290942.9
ENST00000393957.7
ENST00000562206.1
ENST00000564104.5
CDS-3UTR CCA 90 bp CTGGGTTGGGGTCATGAGGCTACAGGCACAGACTGTCCCCAGGTGGACAGAAGTGCCACACCCGTGAACTaGAGCCACCCGTCCCGCTCC +
Preference number: 4 (lower is better)
Translates to: LGWGHEATGTDCPQVDRSATPVN*SHPSRS
Trigger: GGAGCGGGACGGGTGGCTCCAGTTCACGGGTGTGGC...ACTTCTGTCCACCTGGGGACAGTCTGTGCCTGTAGCCTCATGACCCCAACCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562206.1
CDS-3UTR CCA 90 bp CTGGGTTGGGGTCATGAGGCTACAGGCACAGACTGTCCCCAGGTGGACAGAAGTCACGGGTGCATGCCCTaGGCAGGGGTGCAGCTGGTC +
Preference number: 4 (lower is better)
Translates to: LGWGHEATGTDCPQVDRSHGCMP*AGVQLV
Trigger: GACCAGCTGCACCCCTGCCCAGGGCATGCACCCGTG...ACTTCTGTCCACCTGGGGACAGTCTGTGCCTGTAGCCTCATGACCCCAACCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000564104.5
CDS-3UTR TCA 90 bp AGGTCCAGCAGGGAGGGGACCAGGATCTCTTGCTCCACGTGCCCCTTAGACCCAGCTGGGTTGGGGTCATaGGGCTACAGGCACAGACTG +
Preference number: 4 (lower is better)
Translates to: RSSREGTRISCSTCPLDPAGLGS*GYRHRL
Trigger: CAGTCTGTGCCTGTAGCCTCATGACCCCAACCCAGC...TGGGTCTAAGGGGCACGTGGAGCAAGAGATCCTGGTCCCCTCCCTGCTGGACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000290942.9
ENST00000393957.7
ENST00000562206.1
ENST00000564104.5
CDS-3UTR TCA 90 bp GTCCAGCAGGGAGGGGACCAGGATCTCTTGCTCCACGTGCCCCTTAGACCCAGGCCTGGCCACAGTTTGTaGAGCCTGGAGACGGTTGCT +
Preference number: 4 (lower is better)
Translates to: VQQGGDQDLLLHVPLRPRPGHSL*SLETVA
Trigger: AGCAACCGTCTCCAGGCTTCACAAACTGTGGCCAGG...CCTGGGTCTAAGGGGCACGTGGAGCAAGAGATCCTGGTCCCCTCCCTGCTGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564104.5
CDS-3UTR GCA 90 bp GCTACAGGCACAGACTGTCCCCAGGTGGACAGAAGTTGGAGCAGGAAGAGGAGGTGGGCGGATCCTGCGTaGAGTGCTCACTCCTCGCGG +
Preference number: 4 (lower is better)
Translates to: ATGTDCPQVDRSWSRKRRWADPA*SAHSSR
Trigger: CCGCGAGGAGTGAGCACTGCACGCAGGATCCGCCCA...CCTCCTCTTCCTGCTCCAACTTCTGTCCACCTGGGGACAGTCTGTGCCTGTAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290942.9
CDS-3UTR GCA 90 bp GTCCAGCAGGGAGGGGACCAGGATCTCTTGCTCCACGTGCCCCTTAGACCCAGGCTGCTACAGAGTTGGTaGTGGAGCTGCCTGGGGAGA +
Preference number: 4 (lower is better)
Translates to: VQQGGDQDLLLHVPLRPRLLQSW*WSCLGR
Trigger: TCTCCCCAGGCAGCTCCAGCACCAACTCTGTAGCAG...CCTGGGTCTAAGGGGCACGTGGAGCAAGAGATCCTGGTCCCCTCCCTGCTGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000564104.5
CDS-3UTR GCA 90 bp GTCCAGCAGGGAGGGGACCAGGATCTCTTGCTCCACGTGCCCCTTAGACCCAGGCTGTGCTCGCTGCCATaGCACCCTATAGAGACCCAC +
Preference number: 4 (lower is better)
Translates to: VQQGGDQDLLLHVPLRPRLCSLP*HPIETH
Trigger: GTGGGTCTCTATAGGGTGGCATGGCAGCGAGCACAG...CCTGGGTCTAAGGGGCACGTGGAGCAAGAGATCCTGGTCCCCTCCCTGCTGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564104.5
CDS-3UTR CCA 90 bp GAGGCTACAGGCACAGACTGTCCCCAGGTGGACAGAAGTTGGAGCAGGAAGAGGGCAGGAATGGACCGATaGACGCGGGAGACCAGGCGG +
Preference number: 4 (lower is better)
Translates to: EATGTDCPQVDRSWSRKRAGMDR*TRETRR
Trigger: CCGCCTGGTCTCCCGCGTCCATCGGTCCATTCCTGC...CCTCTTCCTGCTCCAACTTCTGTCCACCTGGGGACAGTCTGTGCCTGTAGCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290942.9
ENST00000393957.7
ENST00000562206.1
CDS-3UTR CCA 90 bp GGCTGGGTTGGGGTCATGAGGCTACAGGCACAGACTGTCCCCAGGTGGACAGAAGCTTGGCCCAAGCACTaGGCGGATCCTGCGTGCAGT +
Preference number: 4 (lower is better)
Translates to: GWVGVMRLQAQTVPRWTEAWPKH*ADPACS
Trigger: ACTGCACGCAGGATCCGCCCAGTGCTTGGGCCAAGC...TTCTGTCCACCTGGGGACAGTCTGTGCCTGTAGCCTCATGACCCCAACCCAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290942.9
ENST00000562206.1
CDS-3UTR CCA 90 bp AGGTCCAGCAGGGAGGGGACCAGGATCTCTTGCTCCACGTGCCCCTTAGACCCAACGTCCAGGGGAGCTTaGATGCCACAGGGTGCTTGG +
Preference number: 4 (lower is better)
Translates to: RSSREGTRISCSTCPLDPTSRGA*MPQGAW
Trigger: CCAAGCACCCTGTGGCATCCAAGCTCCCCTGGACGT...TGGGTCTAAGGGGCACGTGGAGCAAGAGATCCTGGTCCCCTCCCTGCTGGACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000290942.9
ENST00000562206.1
CDS-3UTR CCA 90 bp AGGTCCAGCAGGGAGGGGACCAGGATCTCTTGCTCCACGTGCCCCTTAGACCCACCACCAGCTGGCAGATaGCATCGAAGGCCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: RSSREGTRISCSTCPLDPPPAGR*HRRPPP
Trigger: AGGAGGAGGCCTTCGATGCCATCTGCCAGCTGGTGG...TGGGTCTAAGGGGCACGTGGAGCAAGAGATCCTGGTCCCCTCCCTGCTGGACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290942.9
ENST00000393957.7
ENST00000562206.1
ENST00000564104.5
CDS-3UTR CCA 90 bp GAGCAGCAGCTTAAATATGAGGCAAGCAGTCAGGGGTTAGCCATGCCTGGGGCTGGCCGCAGAGCAGCCTaGGTCAGAGGCCTGGTGGGC +
Preference number: 4 (lower is better)
Translates to: EQQLKYEASSQGLAMPGAGRRAA*VRGLVG
Trigger: GCCCACCAGGCCTCTGACCCAGGCTGCTCTGCGGCC...AGCCCCAGGCATGGCTAACCCCTGACTGCTTGCCTCATATTTAAGCTGCTGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290942.9
ENST00000393957.7
ENST00000562206.1
ENST00000564104.5
CDS-3UTR CCA 90 bp CAGCTTAAATATGAGGCAAGCAGTCAGGGGTTAGCCATGCCTGGGGCTGGGTTGGGCCGCAGAGCAGCCTaGGTCAGAGGCCTGGTGGGC +
Preference number: 4 (lower is better)
Translates to: QLKYEASSQGLAMPGAGLGRRAA*VRGLVG
Trigger: GCCCACCAGGCCTCTGACCCAGGCTGCTCTGCGGCC...CAACCCAGCCCCAGGCATGGCTAACCCCTGACTGCTTGCCTCATATTTAAGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290942.9
ENST00000393957.7
ENST00000562206.1
ENST00000564104.5
CDS-3UTR CCA 90 bp AGGCTACAGGCACAGACTGTCCCCAGGTGGACAGAAGTTGGAGCAGGAAGAGGAAGCTGGCTCCTCGGCTaGGACCGCCGGAGGTTGGGA +
Preference number: 4 (lower is better)
Translates to: RLQAQTVPRWTEVGAGRGSWLLG*DRRRLG
Trigger: TCCCAACCTCCGGCGGTCCCAGCCGAGGAGCCAGCT...TCCTCTTCCTGCTCCAACTTCTGTCCACCTGGGGACAGTCTGTGCCTGTAGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562206.1
CDS-3UTR CCA 90 bp TGGCCAGAGCAGCAGCTTAAATATGAGGCAAGCAGTCAGGGGTTAGCCATGCCTGCAGGGCCGCTCAGCTaGCTCCTCGGCTGGGACCGC +
Preference number: 4 (lower is better)
Translates to: WPEQQLKYEASSQGLAMPAGPLS*LLGWDR
Trigger: GCGGTCCCAGCCGAGGAGCCAGCTGAGCGGCCCTGC...AGGCATGGCTAACCCCTGACTGCTTGCCTCATATTTAAGCTGCTGCTCTGGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562206.1
CDS-3UTR CCA 90 bp GGCTGGGTTGGGGTCATGAGGCTACAGGCACAGACTGTCCCCAGGTGGACAGAACAGCAAGAGCCAGTCTaGGCACGGGTGCATGCCCTG +
Preference number: 4 (lower is better)
Translates to: GWVGVMRLQAQTVPRWTEQQEPV*ARVHAL
Trigger: CAGGGCATGCACCCGTGCCCAGACTGGCTCTTGCTG...TTCTGTCCACCTGGGGACAGTCTGTGCCTGTAGCCTCATGACCCCAACCCAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564104.5
CDS-3UTR CCA 90 bp AGGTCCAGCAGGGAGGGGACCAGGATCTCTTGCTCCACGTGCCCCTTAGACCCAGGCTTTGTCTGGCCCTaGCACAAGGCCTTGCTTGGG +
Preference number: 4 (lower is better)
Translates to: RSSREGTRISCSTCPLDPGFVWP*HKALLG
Trigger: CCCAAGCAAGGCCTTGTGCCAGGGCCAGACAAAGCC...TGGGTCTAAGGGGCACGTGGAGCAAGAGATCCTGGTCCCCTCCCTGCTGGACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564104.5
CDS-3UTR GCA 90 bp GGCTACAGGCACAGACTGTCCCCAGGTGGACAGAAGTTGGAGCAGGAAGAGGAGCCAGGGGAGCTTGGATaGCACAGGGTGCTTGGCCCA +
Preference number: 4 (lower is better)
Translates to: GYRHRLSPGGQKLEQEEEPGELG*HRVLGP
Trigger: TGGGCCAAGCACCCTGTGGCATCCAAGCTCCCCTGG...CTCCTCTTCCTGCTCCAACTTCTGTCCACCTGGGGACAGTCTGTGCCTGTAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290942.9
ENST00000562206.1
CDS-3UTR GCA 90 bp GGCTGGGTTGGGGTCATGAGGCTACAGGCACAGACTGTCCCCAGGTGGACAGAAGCCCAGCCATGTCTGTaGTCGCTGCCATGCCACCTT +
Preference number: 4 (lower is better)
Translates to: GWVGVMRLQAQTVPRWTEAQPCL*SLPCHL
Trigger: AAGGTGGCATGGCAGCGAGCACAGACATGGCTGGGC...TTCTGTCCACCTGGGGACAGTCTGTGCCTGTAGCCTCATGACCCCAACCCAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290942.9
ENST00000562206.1
CDS-3UTR GCA 90 bp CAGCAGGGAGGGGACCAGGATCTCTTGCTCCACGTGCCCCTTAGACCCAGGCCTCATGGATGGCAAACTTaGGGAAGCTCTCCTCCAGCC +
Preference number: 4 (lower is better)
Translates to: QQGGDQDLLLHVPLRPRPHGWQT*GSSPPA
Trigger: GGCTGGAGGAGAGCTTCCGCAAGTTTGCCATCCATG...AGGCCTGGGTCTAAGGGGCACGTGGAGCAAGAGATCCTGGTCCCCTCCCTGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290942.9
ENST00000393957.7
ENST00000562206.1
ENST00000564104.5
CDS-3UTR GCA 90 bp AGCAGGGAGGGGACCAGGATCTCTTGCTCCACGTGCCCCTTAGACCCAGGCCTGTTCCGTCAGCCACCTTaGAGTCCTTGCACAGCTTGG +
Preference number: 4 (lower is better)
Translates to: SREGTRISCSTCPLDPGLFRQPP*SPCTAW
Trigger: CCAAGCTGTGCAAGGACTGCAAGGTGGCTGACGGAA...CAGGCCTGGGTCTAAGGGGCACGTGGAGCAAGAGATCCTGGTCCCCTCCCTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290942.9
ENST00000393957.7
ENST00000562206.1
ENST00000564104.5
CDS-3UTR GCA 90 bp GTCCAGCAGGGAGGGGACCAGGATCTCTTGCTCCACGTGCCCCTTAGACCCAGGTTCCGTCAGCCACCTTaGAGTCCTTGCACAGCTTGG +
Preference number: 4 (lower is better)
Translates to: VQQGGDQDLLLHVPLRPRFRQPP*SPCTAW
Trigger: CCAAGCTGTGCAAGGACTGCAAGGTGGCTGACGGAA...CCTGGGTCTAAGGGGCACGTGGAGCAAGAGATCCTGGTCCCCTCCCTGCTGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290942.9
ENST00000393957.7
ENST00000562206.1
ENST00000564104.5
CDS-3UTR GCA 90 bp AGGTCCAGCAGGGAGGGGACCAGGATCTCTTGCTCCACGTGCCCCTTAGACCCACATTGGCTGGCTCTTTaGCTGCCACCAGCTGGCAGA +
Preference number: 4 (lower is better)
Translates to: RSSREGTRISCSTCPLDPHWLAL*LPPAGR
Trigger: TCTGCCAGCTGGTGGCAGGCAAAGAGCCAGCCAATG...TGGGTCTAAGGGGCACGTGGAGCAAGAGATCCTGGTCCCCTCCCTGCTGGACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290942.9
ENST00000393957.7
ENST00000562206.1
ENST00000564104.5
CDS-3UTR GCA 90 bp AGCAGGGAGGGGACCAGGATCTCTTGCTCCACGTGCCCCTTAGACCCAGGCCTGGGCATCGTAGGTGCCTaGATTCTTGTAGGCGCTCAC +
Preference number: 4 (lower is better)
Translates to: SREGTRISCSTCPLDPGLGIVGA*ILVGAH
Trigger: GTGAGCGCCTACAAGAATGCAGGCACCTACGATGCC...CAGGCCTGGGTCTAAGGGGCACGTGGAGCAAGAGATCCTGGTCCCCTCCCTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290942.9
ENST00000393957.7
ENST00000562206.1
ENST00000564104.5
CDS-3UTR GCA 90 bp AGCAGGGAGGGGACCAGGATCTCTTGCTCCACGTGCCCCTTAGACCCAGGCCTGCCTTGGCATCGTAGGTaGCTGCATTCTTGTAGGCGC +
Preference number: 4 (lower is better)
Translates to: SREGTRISCSTCPLDPGLPWHRR*LHSCRR
Trigger: GCGCCTACAAGAATGCAGGCACCTACGATGCCAAGG...CAGGCCTGGGTCTAAGGGGCACGTGGAGCAAGAGATCCTGGTCCCCTCCCTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290942.9
ENST00000393957.7
ENST00000562206.1
ENST00000564104.5
CDS-3UTR GCA 90 bp GGCTACAGGCACAGACTGTCCCCAGGTGGACAGAAGTTGGAGCAGGAAGAGGAGGCCCAGCCATGTCTGTaGTCGCTGCCATGCCACCCT +
Preference number: 4 (lower is better)
Translates to: GYRHRLSPGGQKLEQEEEAQPCL*SLPCHP
Trigger: AGGGTGGCATGGCAGCGAGCACAGACATGGCTGGGC...CTCCTCTTCCTGCTCCAACTTCTGTCCACCTGGGGACAGTCTGTGCCTGTAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393957.7
ENST00000564104.5
CDS-3UTR GCA 90 bp CAGCTTAAATATGAGGCAAGCAGTCAGGGGTTAGCCATGCCTGGGGCTGGGTTGGGCTGCGAGGTGGAATaGTTGGGGCCAGGGCAGGGC +
Preference number: 4 (lower is better)
Translates to: QLKYEASSQGLAMPGAGLGCEVE*LGPGQG
Trigger: GCCCTGCCCTGGCCCCAAGCATTCCACCTCGCAGCC...CAACCCAGCCCCAGGCATGGCTAACCCCTGACTGCTTGCCTCATATTTAAGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000562206.1
CDS-3UTR GCA 90 bp CAGCAGGGAGGGGACCAGGATCTCTTGCTCCACGTGCCCCTTAGACCCAGGCCTGACCTGGGCAGGTTCTaGTACAGAGTTGGTGCTGGA +
Preference number: 4 (lower is better)
Translates to: QQGGDQDLLLHVPLRPRPDLGRF*YRVGAG
Trigger: TCCAGCACCAACTCTGTAGCAGAACCTGCCCAGGTC...AGGCCTGGGTCTAAGGGGCACGTGGAGCAAGAGATCCTGGTCCCCTCCCTGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564104.5
CDS-3UTR CCA 90 bp GTTGGGGTCATGAGGCTACAGGCACAGACTGTCCCCAGGTGGACAGAAGTTGGAGCAGGAATGGACCGATaGACGCGGGAGACCAGGCGG +
Preference number: 4 (lower is better)
Translates to: VGVMRLQAQTVPRWTEVGAGMDR*TRETRR
Trigger: CCGCCTGGTCTCCCGCGTCCATCGGTCCATTCCTGC...TCCAACTTCTGTCCACCTGGGGACAGTCTGTGCCTGTAGCCTCATGACCCCAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290942.9
ENST00000393957.7
ENST00000562206.1
CDS-3UTR CCA 90 bp AGGTCCAGCAGGGAGGGGACCAGGATCTCTTGCTCCACGTGCCCCTTAGACCCACTTGCCCACTGGCCTTaGGGTCACCATGGATGGCAA +
Preference number: 4 (lower is better)
Translates to: RSSREGTRISCSTCPLDPLAHWP*GHHGWQ
Trigger: TTGCCATCCATGGTGACCCCAAGGCCAGTGGGCAAG...TGGGTCTAAGGGGCACGTGGAGCAAGAGATCCTGGTCCCCTCCCTGCTGGACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290942.9
ENST00000393957.7
ENST00000562206.1
ENST00000564104.5
CDS-3UTR CCA 90 bp GGCTGGGTTGGGGTCATGAGGCTACAGGCACAGACTGTCCCCAGGTGGACAGAAGACGCCCACATTGGCTaGCTCTTTGCCTGCCACCAG +
Preference number: 4 (lower is better)
Translates to: GWVGVMRLQAQTVPRWTEDAHIG*LFACHQ
Trigger: CTGGTGGCAGGCAAAGAGCCAGCCAATGTGGGCGTC...TTCTGTCCACCTGGGGACAGTCTGTGCCTGTAGCCTCATGACCCCAACCCAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290942.9
ENST00000393957.7
ENST00000562206.1
ENST00000564104.5
CDS-3UTR CCA 90 bp TGGCAGGTCCAGCAGGGAGGGGACCAGGATCTCTTGCTCCACGTGCCCCTTAGAAGCCCGTGTATCTGCTaGTGTCCGTCAGCCGGTCTA +
Preference number: 4 (lower is better)
Translates to: WQVQQGGDQDLLLHVPLRSPCIC*CPSAGL
Trigger: TAGACCGGCTGACGGACACCAGCAGATACACGGGCT...TCTAAGGGGCACGTGGAGCAAGAGATCCTGGTCCCCTCCCTGCTGGACCTGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290942.9
ENST00000393957.7
ENST00000562206.1
ENST00000564104.5
CDS-3UTR CCA 90 bp GGCACTTGGCCAGAGCAGCAGCTTAAATATGAGGCAAGCAGTCAGGGGTTAGCCCCAGGCCTGAGCCTCTaGCAGGGGCAGCCGCACTTG +
Preference number: 4 (lower is better)
Translates to: GTWPEQQLKYEASSQGLAPGLSL*QGQPHL
Trigger: CAAGTGCGGCTGCCCCTGCCAGAGGCTCAGGCCTGG...GGCTAACCCCTGACTGCTTGCCTCATATTTAAGCTGCTGCTCTGGCCAAGTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000290942.9
ENST00000393957.7
ENST00000562206.1
ENST00000564104.5
CDS-3UTR CCA 90 bp GTTGGGGTCATGAGGCTACAGGCACAGACTGTCCCCAGGTGGACAGAAGTTGGAGCAGGAAGCTCTGGGTaGCAGGTCCAGCAGGGAGGG +
Preference number: 4 (lower is better)
Translates to: VGVMRLQAQTVPRWTEVGAGSSG*QVQQGG
Trigger: CCCTCCCTGCTGGACCTGCCACCCAGAGCTTCCTGC...TCCAACTTCTGTCCACCTGGGGACAGTCTGTGCCTGTAGCCTCATGACCCCAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290942.9
ENST00000393957.7
ENST00000562206.1
ENST00000564104.5
CDS-3UTR CCA 90 bp TGGCAGGTCCAGCAGGGAGGGGACCAGGATCTCTTGCTCCACGTGCCCCTTAGAGCACAAGGCCTTGCTTaGGTGGAAGTGAGGGTGGCA +
Preference number: 4 (lower is better)
Translates to: WQVQQGGDQDLLLHVPLRAQGLA*VEVRVA
Trigger: TGCCACCCTCACTTCCACCCAAGCAAGGCCTTGTGC...TCTAAGGGGCACGTGGAGCAAGAGATCCTGGTCCCCTCCCTGCTGGACCTGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564104.5
CDS-3UTR TCA 90 bp AGGCTACAGGCACAGACTGTCCCCAGGTGGACAGAAGTTGGAGCAGGAAGAGGACCTCGCGGCTGCTCCTaGAGTGTGCGTTCGGAAGGA +
Preference number: 4 (lower is better)
Translates to: RLQAQTVPRWTEVGAGRGPRGCS*SVRSEG
Trigger: TCCTTCCGAACGCACACTTCAGGAGCAGCCGCGAGG...TCCTCTTCCTGCTCCAACTTCTGTCCACCTGGGGACAGTCTGTGCCTGTAGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290942.9
ENST00000393957.7
ENST00000562206.1
CDS-3UTR GCA 90 bp GCTACAGGCACAGACTGTCCCCAGGTGGACAGAAGTTGGAGCAGGAAGAGGAGGTTGGATGCCACAGGGTaGTTGGCCCAAGCACTGGGC +
Preference number: 4 (lower is better)
Translates to: ATGTDCPQVDRSWSRKRRLDATG*LAQALG
Trigger: GCCCAGTGCTTGGGCCAAGCACCCTGTGGCATCCAA...CCTCCTCTTCCTGCTCCAACTTCTGTCCACCTGGGGACAGTCTGTGCCTGTAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290942.9
ENST00000562206.1
CDS-3UTR GCA 90 bp GAGGCTACAGGCACAGACTGTCCCCAGGTGGACAGAAGTTGGAGCAGGAAGAGGGCCCAGCCATGTCTGTaGTCGCTGCCATGCCACCTT +
Preference number: 4 (lower is better)
Translates to: EATGTDCPQVDRSWSRKRAQPCL*SLPCHL
Trigger: AAGGTGGCATGGCAGCGAGCACAGACATGGCTGGGC...CCTCTTCCTGCTCCAACTTCTGTCCACCTGGGGACAGTCTGTGCCTGTAGCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290942.9
ENST00000562206.1
CDS-3UTR GCA 90 bp GTCCAGCAGGGAGGGGACCAGGATCTCTTGCTCCACGTGCCCCTTAGACCCAGGGCTTGGCCCAGTTCTTaGCATTCATCTCTTGCCCAC +
Preference number: 4 (lower is better)
Translates to: VQQGGDQDLLLHVPLRPRAWPSS*HSSLAH
Trigger: GTGGGCAAGAGATGAATGGCAAGAACTGGGCCAAGC...CCTGGGTCTAAGGGGCACGTGGAGCAAGAGATCCTGGTCCCCTCCCTGCTGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290942.9
ENST00000393957.7
ENST00000562206.1
ENST00000564104.5
CDS-3UTR GCA 90 bp TGGCAGGTCCAGCAGGGAGGGGACCAGGATCTCTTGCTCCACGTGCCCCTTAGACCACCTTGCAGTCCTTaGACAGCTTGGCCCAGTTCT +
Preference number: 4 (lower is better)
Translates to: WQVQQGGDQDLLLHVPLRPPCSP*TAWPSS
Trigger: AGAACTGGGCCAAGCTGTGCAAGGACTGCAAGGTGG...TCTAAGGGGCACGTGGAGCAAGAGATCCTGGTCCCCTCCCTGCTGGACCTGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290942.9
ENST00000393957.7
ENST00000562206.1
ENST00000564104.5
CDS-3UTR GCA 90 bp CTGGGTTGGGGTCATGAGGCTACAGGCACAGACTGTCCCCAGGTGGACAGAAGTTCGTCCAGGATGTCCTaGCGTCCCGCAATGCCCTTG +
Preference number: 4 (lower is better)
Translates to: LGWGHEATGTDCPQVDRSSSRMS*RPAMPL
Trigger: CAAGGGCATTGCGGGACGGCAGGACATCCTGGACGA...ACTTCTGTCCACCTGGGGACAGTCTGTGCCTGTAGCCTCATGACCCCAACCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290942.9
ENST00000393957.7
ENST00000562206.1
ENST00000564104.5
CDS-3UTR GCA 90 bp GAGGCTACAGGCACAGACTGTCCCCAGGTGGACAGAAGTTGGAGCAGGAAGAGGTCGTCCAGGATGTCCTaGCGTCCCGCAATGCCCTTG +
Preference number: 4 (lower is better)
Translates to: EATGTDCPQVDRSWSRKRSSRMS*RPAMPL
Trigger: CAAGGGCATTGCGGGACGGCAGGACATCCTGGACGA...CCTCTTCCTGCTCCAACTTCTGTCCACCTGGGGACAGTCTGTGCCTGTAGCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290942.9
ENST00000393957.7
ENST00000562206.1
ENST00000564104.5
CDS-3UTR GCA 90 bp TGGCAGGTCCAGCAGGGAGGGGACCAGGATCTCTTGCTCCACGTGCCCCTTAGACCTTGGCATCGTAGGTaGCTGCATTCTTGTAGGCGC +
Preference number: 4 (lower is better)
Translates to: WQVQQGGDQDLLLHVPLRPWHRR*LHSCRR
Trigger: GCGCCTACAAGAATGCAGGCACCTACGATGCCAAGG...TCTAAGGGGCACGTGGAGCAAGAGATCCTGGTCCCCTCCCTGCTGGACCTGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290942.9
ENST00000393957.7
ENST00000562206.1
ENST00000564104.5
CDS-3UTR GCA 90 bp AGGTCCAGCAGGGAGGGGACCAGGATCTCTTGCTCCACGTGCCCCTTAGACCCACCCCAACCCTCATCGTaGAGGATACTGATTGGGGTG +
Preference number: 4 (lower is better)
Translates to: RSSREGTRISCSTCPLDPPQPSS*RILIGV
Trigger: CACCCCAATCAGTATCCTGCACGATGAGGGTTGGGG...TGGGTCTAAGGGGCACGTGGAGCAAGAGATCCTGGTCCCCTCCCTGCTGGACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000562206.1
CDS-3UTR GCA 90 bp TGGCCAGAGCAGCAGCTTAAATATGAGGCAAGCAGTCAGGGGTTAGCCATGCCTCAGTCTGGGCACGGGTaGATGCCCTGGGCAGGGGTG +
Preference number: 4 (lower is better)
Translates to: WPEQQLKYEASSQGLAMPQSGHG*MPWAGV
Trigger: CACCCCTGCCCAGGGCATGCACCCGTGCCCAGACTG...AGGCATGGCTAACCCCTGACTGCTTGCCTCATATTTAAGCTGCTGCTCTGGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564104.5
CDS-3UTR CCA 90 bp GGCTGGGTTGGGGTCATGAGGCTACAGGCACAGACTGTCCCCAGGTGGACAGAACTTGCCCACTGGCCTTaGGGTCACCATGGATGGCAA +
Preference number: 4 (lower is better)
Translates to: GWVGVMRLQAQTVPRWTELAHWP*GHHGWQ
Trigger: TTGCCATCCATGGTGACCCCAAGGCCAGTGGGCAAG...TTCTGTCCACCTGGGGACAGTCTGTGCCTGTAGCCTCATGACCCCAACCCAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290942.9
ENST00000393957.7
ENST00000562206.1
ENST00000564104.5
CDS-3UTR CCA 90 bp AGGTCCAGCAGGGAGGGGACCAGGATCTCTTGCTCCACGTGCCCCTTAGACCCATCATCTCTTGCCCACTaGCCTTGGGGTCACCATGGA +
Preference number: 4 (lower is better)
Translates to: RSSREGTRISCSTCPLDPSSLAH*PWGHHG
Trigger: TCCATGGTGACCCCAAGGCCAGTGGGCAAGAGATGA...TGGGTCTAAGGGGCACGTGGAGCAAGAGATCCTGGTCCCCTCCCTGCTGGACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000290942.9
ENST00000393957.7
ENST00000562206.1
ENST00000564104.5
CDS-3UTR CCA 90 bp GCTACAGGCACAGACTGTCCCCAGGTGGACAGAAGTTGGAGCAGGAAGAGGAGGTTGCCTGCCACCAGCTaGCAGATGGCATCGAAGGCC +
Preference number: 4 (lower is better)
Translates to: ATGTDCPQVDRSWSRKRRLPATS*QMASKA
Trigger: GGCCTTCGATGCCATCTGCCAGCTGGTGGCAGGCAA...CCTCCTCTTCCTGCTCCAACTTCTGTCCACCTGGGGACAGTCTGTGCCTGTAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290942.9
ENST00000393957.7
ENST00000562206.1
ENST00000564104.5
CDS-3UTR CCA 90 bp CTGGGTTGGGGTCATGAGGCTACAGGCACAGACTGTCCCCAGGTGGACAGAAGTGACGCCCACATTGGCTaGCTCTTTGCCTGCCACCAG +
Preference number: 4 (lower is better)
Translates to: LGWGHEATGTDCPQVDRSDAHIG*LFACHQ
Trigger: CTGGTGGCAGGCAAAGAGCCAGCCAATGTGGGCGTC...ACTTCTGTCCACCTGGGGACAGTCTGTGCCTGTAGCCTCATGACCCCAACCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290942.9
ENST00000393957.7
ENST00000562206.1
ENST00000564104.5
CDS-3UTR CCA 90 bp GGCTACAGGCACAGACTGTCCCCAGGTGGACAGAAGTTGGAGCAGGAAGAGGAGGACGCCCACATTGGCTaGCTCTTTGCCTGCCACCAG +
Preference number: 4 (lower is better)
Translates to: GYRHRLSPGGQKLEQEEEDAHIG*LFACHQ
Trigger: CTGGTGGCAGGCAAAGAGCCAGCCAATGTGGGCGTC...CTCCTCTTCCTGCTCCAACTTCTGTCCACCTGGGGACAGTCTGTGCCTGTAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290942.9
ENST00000393957.7
ENST00000562206.1
ENST00000564104.5
CDS-3UTR CCA 90 bp GAGGCTACAGGCACAGACTGTCCCCAGGTGGACAGAAGTTGGAGCAGGAAGAGGGACGCCCACATTGGCTaGCTCTTTGCCTGCCACCAG +
Preference number: 4 (lower is better)
Translates to: EATGTDCPQVDRSWSRKRDAHIG*LFACHQ
Trigger: CTGGTGGCAGGCAAAGAGCCAGCCAATGTGGGCGTC...CCTCTTCCTGCTCCAACTTCTGTCCACCTGGGGACAGTCTGTGCCTGTAGCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290942.9
ENST00000393957.7
ENST00000562206.1
ENST00000564104.5
CDS-3UTR CCA 90 bp CCAGAGCAGCAGCTTAAATATGAGGCAAGCAGTCAGGGGTTAGCCATGCCTGGGAGGGGCAGCCGCACTTaGCAGGGCGGTCTTCCCAAG +
Preference number: 4 (lower is better)
Translates to: PEQQLKYEASSQGLAMPGRGSRT*QGGLPK
Trigger: CTTGGGAAGACCGCCCTGCCAAGTGCGGCTGCCCCT...CCCAGGCATGGCTAACCCCTGACTGCTTGCCTCATATTTAAGCTGCTGCTCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290942.9
ENST00000393957.7
ENST00000562206.1
ENST00000564104.5
CDS-3UTR CCA 90 bp CAGCTTAAATATGAGGCAAGCAGTCAGGGGTTAGCCATGCCTGGGGCTGGGTTGGCAGGAAGCTCTGGGTaGCAGGTCCAGCAGGGAGGG +
Preference number: 4 (lower is better)
Translates to: QLKYEASSQGLAMPGAGLAGSSG*QVQQGG
Trigger: CCCTCCCTGCTGGACCTGCCACCCAGAGCTTCCTGC...CAACCCAGCCCCAGGCATGGCTAACCCCTGACTGCTTGCCTCATATTTAAGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290942.9
ENST00000393957.7
ENST00000562206.1
ENST00000564104.5
CDS-3UTR CCA 90 bp GTTGGGGTCATGAGGCTACAGGCACAGACTGTCCCCAGGTGGACAGAAGTTGGAGGGGTTAGCCATGCCTaGGGCTGGGTTGGGGTCATG +
Preference number: 4 (lower is better)
Translates to: VGVMRLQAQTVPRWTEVGGVSHA*GWVGVM
Trigger: CATGACCCCAACCCAGCCCCAGGCATGGCTAACCCC...TCCAACTTCTGTCCACCTGGGGACAGTCTGTGCCTGTAGCCTCATGACCCCAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000290942.9
ENST00000393957.7
ENST00000562206.1
ENST00000564104.5
CDS-3UTR CCA 90 bp GGCTGGGTTGGGGTCATGAGGCTACAGGCACAGACTGTCCCCAGGTGGACAGAACATCTGGGTCTCCTATaGGCTTCTACCTCGCGGCTG +
Preference number: 4 (lower is better)
Translates to: GWVGVMRLQAQTVPRWTEHLGLL*ASTSRL
Trigger: CAGCCGCGAGGTAGAAGCCCATAGGAGACCCAGATG...TTCTGTCCACCTGGGGACAGTCTGTGCCTGTAGCCTCATGACCCCAACCCAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562206.1
CDS-3UTR CCA 90 bp CAGCTTAAATATGAGGCAAGCAGTCAGGGGTTAGCCATGCCTGGGGCTGGGTTGGGGACCGCCGGAGGTTaGGACCCTTTCCAGGCTGCT +
Preference number: 4 (lower is better)
Translates to: QLKYEASSQGLAMPGAGLGTAGG*DPFQAA
Trigger: AGCAGCCTGGAAAGGGTCCCAACCTCCGGCGGTCCC...CAACCCAGCCCCAGGCATGGCTAACCCCTGACTGCTTGCCTCATATTTAAGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000562206.1
CDS-3UTR CCA 90 bp TGGCCAGAGCAGCAGCTTAAATATGAGGCAAGCAGTCAGGGGTTAGCCATGCCTGTGGGGGCTGCGAGGTaGAATGCTTGGGGCCAGGGC +
Preference number: 4 (lower is better)
Translates to: WPEQQLKYEASSQGLAMPVGAAR*NAWGQG
Trigger: GCCCTGGCCCCAAGCATTCCACCTCGCAGCCCCCAC...AGGCATGGCTAACCCCTGACTGCTTGCCTCATATTTAAGCTGCTGCTCTGGCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000562206.1
CDS-3UTR CCA 90 bp GCTACAGGCACAGACTGTCCCCAGGTGGACAGAAGTTGGAGCAGGAAGAGGAGGCCGTCCCGCTCCCACTaGGACAGCTGGAGTCATCAA +
Preference number: 4 (lower is better)
Translates to: ATGTDCPQVDRSWSRKRRPSRSH*DSWSHQ
Trigger: TTGATGACTCCAGCTGTCCCAGTGGGAGCGGGACGG...CCTCCTCTTCCTGCTCCAACTTCTGTCCACCTGGGGACAGTCTGTGCCTGTAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562206.1
CDS-3UTR CCA 90 bp AGGCTACAGGCACAGACTGTCCCCAGGTGGACAGAAGTTGGAGCAGGAAGAGGATGGGTCTGCAGGCCATaGATGGAGTGGCCACACCCG +
Preference number: 4 (lower is better)
Translates to: RLQAQTVPRWTEVGAGRGWVCRP*MEWPHP
Trigger: CGGGTGTGGCCACTCCATCCATGGCCTGCAGACCCA...TCCTCTTCCTGCTCCAACTTCTGTCCACCTGGGGACAGTCTGTGCCTGTAGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562206.1
CDS-3UTR CCA 90 bp GAGGCTACAGGCACAGACTGTCCCCAGGTGGACAGAAGTTGGAGCAGGAAGAGGATAACCGTGGCTTCCTaGCCCCTTGCCACCGACTGG +
Preference number: 4 (lower is better)
Translates to: EATGTDCPQVDRSWSRKRITVAS*PLATDW
Trigger: CCAGTCGGTGGCAAGGGGCCAGGAAGCCACGGTTAT...CCTCTTCCTGCTCCAACTTCTGTCCACCTGGGGACAGTCTGTGCCTGTAGCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564104.5
CDS-3UTR CCA 90 bp CTGGGTTGGGGTCATGAGGCTACAGGCACAGACTGTCCCCAGGTGGACAGAAGTGGGCAGGGGTGCAGCTaGTCCAGCAAGGCCTTGTTA +
Preference number: 4 (lower is better)
Translates to: LGWGHEATGTDCPQVDRSGQGCS*SSKALL
Trigger: TAACAAGGCCTTGCTGGACCAGCTGCACCCCTGCCC...ACTTCTGTCCACCTGGGGACAGTCTGTGCCTGTAGCCTCATGACCCCAACCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000564104.5
CDS-3UTR CCA 90 bp CCAGAGCAGCAGCTTAAATATGAGGCAAGCAGTCAGGGGTTAGCCATGCCTGGGGCCAGGCCAGGCTGCTaGTCGGGCAGGCATTCAGTG +
Preference number: 4 (lower is better)
Translates to: PEQQLKYEASSQGLAMPGARPGC*SGRHSV
Trigger: CACTGAATGCCTGCCCGACCAGCAGCCTGGCCTGGC...CCCAGGCATGGCTAACCCCTGACTGCTTGCCTCATATTTAAGCTGCTGCTCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564104.5
CDS-3UTR CCA 90 bp GGCTGGGTTGGGGTCATGAGGCTACAGGCACAGACTGTCCCCAGGTGGACAGAAGTTCTGCTACAGAGTTaGTGCTGGAGCTGCCTGGGG +
Preference number: 4 (lower is better)
Translates to: GWVGVMRLQAQTVPRWTEVLLQS*CWSCLG
Trigger: CCCCAGGCAGCTCCAGCACCAACTCTGTAGCAGAAC...TTCTGTCCACCTGGGGACAGTCTGTGCCTGTAGCCTCATGACCCCAACCCAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564104.5
CDS-3UTR TCA 90 bp GGCACTTGGCCAGAGCAGCAGCTTAAATATGAGGCAAGCAGTCAGGGGTTAGCCCCTCGCGGCTGCTCCTaGAGTGTGCGTTCGGAAGGA +
Preference number: 4 (lower is better)
Translates to: GTWPEQQLKYEASSQGLAPRGCS*SVRSEG
Trigger: TCCTTCCGAACGCACACTTCAGGAGCAGCCGCGAGG...GGCTAACCCCTGACTGCTTGCCTCATATTTAAGCTGCTGCTCTGGCCAAGTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290942.9
ENST00000393957.7
ENST00000562206.1
CDS-3UTR TCA 90 bp AGGCTACAGGCACAGACTGTCCCCAGGTGGACAGAAGTTGGAGCAGGAAGAGGAGCTGGGTTGGGGTCATaGGGCTACAGGCACAGACTG +
Preference number: 4 (lower is better)
Translates to: RLQAQTVPRWTEVGAGRGAGLGS*GYRHRL
Trigger: CAGTCTGTGCCTGTAGCCTCATGACCCCAACCCAGC...TCCTCTTCCTGCTCCAACTTCTGTCCACCTGGGGACAGTCTGTGCCTGTAGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290942.9
ENST00000393957.7
ENST00000562206.1
ENST00000564104.5
CDS-3UTR GCA 90 bp GGCACTTGGCCAGAGCAGCAGCTTAAATATGAGGCAAGCAGTCAGGGGTTAGCCGCACTGGGCGGATCCTaGGTGCAGTGCTCACTCCTC +
Preference number: 4 (lower is better)
Translates to: GTWPEQQLKYEASSQGLAALGGS*VQCSLL
Trigger: GAGGAGTGAGCACTGCACGCAGGATCCGCCCAGTGC...GGCTAACCCCTGACTGCTTGCCTCATATTTAAGCTGCTGCTCTGGCCAAGTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290942.9
CDS-3UTR GCA 90 bp GGCTGGGTTGGGGTCATGAGGCTACAGGCACAGACTGTCCCCAGGTGGACAGAACATGGATGGCAAACTTaGGGAAGCTCTCCTCCAGCC +
Preference number: 4 (lower is better)
Translates to: GWVGVMRLQAQTVPRWTEHGWQT*GSSPPA
Trigger: GGCTGGAGGAGAGCTTCCGCAAGTTTGCCATCCATG...TTCTGTCCACCTGGGGACAGTCTGTGCCTGTAGCCTCATGACCCCAACCCAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290942.9
ENST00000393957.7
ENST00000562206.1
ENST00000564104.5
CDS-3UTR GCA 90 bp GAGGCTACAGGCACAGACTGTCCCCAGGTGGACAGAAGTTGGAGCAGGAAGAGGCATTGGCTGGCTCTTTaGCTGCCACCAGCTGGCAGA +
Preference number: 4 (lower is better)
Translates to: EATGTDCPQVDRSWSRKRHWLAL*LPPAGR
Trigger: TCTGCCAGCTGGTGGCAGGCAAAGAGCCAGCCAATG...CCTCTTCCTGCTCCAACTTCTGTCCACCTGGGGACAGTCTGTGCCTGTAGCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290942.9
ENST00000393957.7
ENST00000562206.1
ENST00000564104.5
CDS-3UTR GCA 90 bp GAGGCTACAGGCACAGACTGTCCCCAGGTGGACAGAAGTTGGAGCAGGAAGAGGGGGACCAGGATCTCTTaGTCCACGTGCCCCTTAGAC +
Preference number: 4 (lower is better)
Translates to: EATGTDCPQVDRSWSRKRGTRIS*STCPLD
Trigger: GTCTAAGGGGCACGTGGAGCAAGAGATCCTGGTCCC...CCTCTTCCTGCTCCAACTTCTGTCCACCTGGGGACAGTCTGTGCCTGTAGCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000290942.9
ENST00000393957.7
ENST00000562206.1
ENST00000564104.5
CDS-3UTR GCA 90 bp CCAGAGCAGCAGCTTAAATATGAGGCAAGCAGTCAGGGGTTAGCCATGCCTGGGGCCCAGCCATGTCTGTaGTCGCTGCCATGCCACCCT +
Preference number: 4 (lower is better)
Translates to: PEQQLKYEASSQGLAMPGAQPCL*SLPCHP
Trigger: AGGGTGGCATGGCAGCGAGCACAGACATGGCTGGGC...CCCAGGCATGGCTAACCCCTGACTGCTTGCCTCATATTTAAGCTGCTGCTCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393957.7
ENST00000564104.5
CDS-3UTR GCA 90 bp GCTACAGGCACAGACTGTCCCCAGGTGGACAGAAGTTGGAGCAGGAAGAGGAGGGGATCCTGCGTGCAGTaGTCACTCCTGTCCGTGGAA +
Preference number: 4 (lower is better)
Translates to: ATGTDCPQVDRSWSRKRRGSCVQ*SLLSVE
Trigger: TTCCACGGACAGGAGTGAGCACTGCACGCAGGATCC...CCTCCTCTTCCTGCTCCAACTTCTGTCCACCTGGGGACAGTCTGTGCCTGTAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562206.1
CDS-3UTR GCA 90 bp CAGCTTAAATATGAGGCAAGCAGTCAGGGGTTAGCCATGCCTGGGGCTGGGTTGTGGGCGGATCCTGCGTaGAGTGCTCACTCCTGTCCG +
Preference number: 4 (lower is better)
Translates to: QLKYEASSQGLAMPGAGLWADPA*SAHSCP
Trigger: CGGACAGGAGTGAGCACTGCACGCAGGATCCGCCCA...CAACCCAGCCCCAGGCATGGCTAACCCCTGACTGCTTGCCTCATATTTAAGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562206.1
CDS-3UTR GCA 90 bp AGGCTACAGGCACAGACTGTCCCCAGGTGGACAGAAGTTGGAGCAGGAAGAGGATCCCTGGAAGCTCCATaGCAAGCTGGCTTGGGGCCA +
Preference number: 4 (lower is better)
Translates to: RLQAQTVPRWTEVGAGRGSLEAP*QAGLGP
Trigger: TGGCCCCAAGCCAGCTTGGCATGGAGCTTCCAGGGA...TCCTCTTCCTGCTCCAACTTCTGTCCACCTGGGGACAGTCTGTGCCTGTAGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564104.5
CDS-3UTR CCA 90 bp GTTGGGGTCATGAGGCTACAGGCACAGACTGTCCCCAGGTGGACAGAAGTTGGAATGCCACAGGGTGCTTaGCCCAAGCACTGGGCGGAT +
Preference number: 4 (lower is better)
Translates to: VGVMRLQAQTVPRWTEVGMPQGA*PKHWAD
Trigger: ATCCGCCCAGTGCTTGGGCCAAGCACCCTGTGGCAT...TCCAACTTCTGTCCACCTGGGGACAGTCTGTGCCTGTAGCCTCATGACCCCAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290942.9
ENST00000562206.1
CDS-3UTR CCA 90 bp AGGTCCAGCAGGGAGGGGACCAGGATCTCTTGCTCCACGTGCCCCTTAGACCCATGGGGTCACCATGGATaGCAAACTTGCGGAAGCTCT +
Preference number: 4 (lower is better)
Translates to: RSSREGTRISCSTCPLDPWGHHG*QTCGSS
Trigger: AGAGCTTCCGCAAGTTTGCCATCCATGGTGACCCCA...TGGGTCTAAGGGGCACGTGGAGCAAGAGATCCTGGTCCCCTCCCTGCTGGACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000290942.9
ENST00000393957.7
ENST00000562206.1
ENST00000564104.5
CDS-3UTR CCA 90 bp GGCTGGGTTGGGGTCATGAGGCTACAGGCACAGACTGTCCCCAGGTGGACAGAAGCCTTGGGGTCACCATaGATGGCAAACTTGCGGAAG +
Preference number: 4 (lower is better)
Translates to: GWVGVMRLQAQTVPRWTEALGSP*MANLRK
Trigger: CTTCCGCAAGTTTGCCATCCATGGTGACCCCAAGGC...TTCTGTCCACCTGGGGACAGTCTGTGCCTGTAGCCTCATGACCCCAACCCAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000290942.9
ENST00000393957.7
ENST00000562206.1
ENST00000564104.5
CDS-3UTR CCA 90 bp CTGGGTTGGGGTCATGAGGCTACAGGCACAGACTGTCCCCAGGTGGACAGAAGTCTTGCCCACTGGCCTTaGGGTCACCATGGATGGCAA +
Preference number: 4 (lower is better)
Translates to: LGWGHEATGTDCPQVDRSLAHWP*GHHGWQ
Trigger: TTGCCATCCATGGTGACCCCAAGGCCAGTGGGCAAG...ACTTCTGTCCACCTGGGGACAGTCTGTGCCTGTAGCCTCATGACCCCAACCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290942.9
ENST00000393957.7
ENST00000562206.1
ENST00000564104.5
CDS-3UTR CCA 90 bp CTGGGTTGGGGTCATGAGGCTACAGGCACAGACTGTCCCCAGGTGGACAGAAGTAGCCCGTGTATCTGCTaGTGTCCGTCAGCCGGTCTA +
Preference number: 4 (lower is better)
Translates to: LGWGHEATGTDCPQVDRSSPCIC*CPSAGL
Trigger: TAGACCGGCTGACGGACACCAGCAGATACACGGGCT...ACTTCTGTCCACCTGGGGACAGTCTGTGCCTGTAGCCTCATGACCCCAACCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290942.9
ENST00000393957.7
ENST00000562206.1
ENST00000564104.5
CDS-3UTR CCA 90 bp GTCCAGCAGGGAGGGGACCAGGATCTCTTGCTCCACGTGCCCCTTAGACCCAGGCTCACTTCTTCACCTTaGCATCGTAGGTGCCTGCAT +
Preference number: 4 (lower is better)
Translates to: VQQGGDQDLLLHVPLRPRLTSSP*HRRCLH
Trigger: ATGCAGGCACCTACGATGCCAAGGTGAAGAAGTGAG...CCTGGGTCTAAGGGGCACGTGGAGCAAGAGATCCTGGTCCCCTCCCTGCTGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290942.9
ENST00000393957.7
ENST00000562206.1
ENST00000564104.5
CDS-3UTR CCA 90 bp CAGCAGGGAGGGGACCAGGATCTCTTGCTCCACGTGCCCCTTAGACCCAGGCCTCTCACTTCTTCACCTTaGCATCGTAGGTGCCTGCAT +
Preference number: 4 (lower is better)
Translates to: QQGGDQDLLLHVPLRPRPLTSSP*HRRCLH
Trigger: ATGCAGGCACCTACGATGCCAAGGTGAAGAAGTGAG...AGGCCTGGGTCTAAGGGGCACGTGGAGCAAGAGATCCTGGTCCCCTCCCTGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290942.9
ENST00000393957.7
ENST00000562206.1
ENST00000564104.5
CDS-3UTR CCA 90 bp GGCTGGGTTGGGGTCATGAGGCTACAGGCACAGACTGTCCCCAGGTGGACAGAACAGACTGTCCCCAGGTaGACAGAAGTTGGAGCAGGA +
Preference number: 4 (lower is better)
Translates to: GWVGVMRLQAQTVPRWTEQTVPR*TEVGAG
Trigger: TCCTGCTCCAACTTCTGTCCACCTGGGGACAGTCTG...TTCTGTCCACCTGGGGACAGTCTGTGCCTGTAGCCTCATGACCCCAACCCAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000290942.9
ENST00000393957.7
ENST00000562206.1
ENST00000564104.5
CDS-3UTR CCA 90 bp GCTACAGGCACAGACTGTCCCCAGGTGGACAGAAGTTGGAGCAGGAAGAGGAGGTCTGCAGGCCATGGATaGAGTGGCCACACCCGTGAA +
Preference number: 4 (lower is better)
Translates to: ATGTDCPQVDRSWSRKRRSAGHG*SGHTRE
Trigger: TTCACGGGTGTGGCCACTCCATCCATGGCCTGCAGA...CCTCCTCTTCCTGCTCCAACTTCTGTCCACCTGGGGACAGTCTGTGCCTGTAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562206.1
CDS-3UTR CCA 90 bp TGGCCAGAGCAGCAGCTTAAATATGAGGCAAGCAGTCAGGGGTTAGCCATGCCTCATGCCAAGCTGGCTTaGGGCCAGGCCAGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: WPEQQLKYEASSQGLAMPHAKLA*GQARLL
Trigger: CAGCAGCCTGGCCTGGCCCCAAGCCAGCTTGGCATG...AGGCATGGCTAACCCCTGACTGCTTGCCTCATATTTAAGCTGCTGCTCTGGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564104.5
CDS-3UTR TCA 90 bp AGGCTACAGGCACAGACTGTCCCCAGGTGGACAGAAGTTGGAGCAGGAAGAGGACATCGTGCAGGATACTaGTTGGGGTGGCGGGCATCT +
Preference number: 4 (lower is better)
Translates to: RLQAQTVPRWTEVGAGRGHRAGY*LGWRAS
Trigger: AGATGCCCGCCACCCCAATCAGTATCCTGCACGATG...TCCTCTTCCTGCTCCAACTTCTGTCCACCTGGGGACAGTCTGTGCCTGTAGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562206.1
CDS-3UTR GCA 90 bp GGCTACAGGCACAGACTGTCCCCAGGTGGACAGAAGTTGGAGCAGGAAGAGGAGGCTGCTCCTGAAGTGTaGGTTCGGAAGGACAGAACG +
Preference number: 4 (lower is better)
Translates to: GYRHRLSPGGQKLEQEEEAAPEV*VRKDRT
Trigger: CGTTCTGTCCTTCCGAACGCACACTTCAGGAGCAGC...CTCCTCTTCCTGCTCCAACTTCTGTCCACCTGGGGACAGTCTGTGCCTGTAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290942.9
ENST00000393957.7
ENST00000562206.1
CDS-3UTR GCA 90 bp GGCTACAGGCACAGACTGTCCCCAGGTGGACAGAAGTTGGAGCAGGAAGAGGAGCATGGATGGCAAACTTaGGGAAGCTCTCCTCCAGCC +
Preference number: 4 (lower is better)
Translates to: GYRHRLSPGGQKLEQEEEHGWQT*GSSPPA
Trigger: GGCTGGAGGAGAGCTTCCGCAAGTTTGCCATCCATG...CTCCTCTTCCTGCTCCAACTTCTGTCCACCTGGGGACAGTCTGTGCCTGTAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290942.9
ENST00000393957.7
ENST00000562206.1
ENST00000564104.5
CDS-3UTR GCA 90 bp GTTGGGGTCATGAGGCTACAGGCACAGACTGTCCCCAGGTGGACAGAAGTTGGACATTGGCTGGCTCTTTaGCTGCCACCAGCTGGCAGA +
Preference number: 4 (lower is better)
Translates to: VGVMRLQAQTVPRWTEVGHWLAL*LPPAGR
Trigger: TCTGCCAGCTGGTGGCAGGCAAAGAGCCAGCCAATG...TCCAACTTCTGTCCACCTGGGGACAGTCTGTGCCTGTAGCCTCATGACCCCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290942.9
ENST00000393957.7
ENST00000562206.1
ENST00000564104.5
CDS-3UTR GCA 90 bp GAGCAGCAGCTTAAATATGAGGCAAGCAGTCAGGGGTTAGCCATGCCTGGGGCTTCGTCCAGGATGTCCTaGCGTCCCGCAATGCCCTTG +
Preference number: 4 (lower is better)
Translates to: EQQLKYEASSQGLAMPGASSRMS*RPAMPL
Trigger: CAAGGGCATTGCGGGACGGCAGGACATCCTGGACGA...AGCCCCAGGCATGGCTAACCCCTGACTGCTTGCCTCATATTTAAGCTGCTGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290942.9
ENST00000393957.7
ENST00000562206.1
ENST00000564104.5
CDS-3UTR GCA 90 bp GAGGCTACAGGCACAGACTGTCCCCAGGTGGACAGAAGTTGGAGCAGGAAGAGGCCTTGGCATCGTAGGTaGCTGCATTCTTGTAGGCGC +
Preference number: 4 (lower is better)
Translates to: EATGTDCPQVDRSWSRKRPWHRR*LHSCRR
Trigger: GCGCCTACAAGAATGCAGGCACCTACGATGCCAAGG...CCTCTTCCTGCTCCAACTTCTGTCCACCTGGGGACAGTCTGTGCCTGTAGCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290942.9
ENST00000393957.7
ENST00000562206.1
ENST00000564104.5
CDS-3UTR GCA 90 bp GTTGGGGTCATGAGGCTACAGGCACAGACTGTCCCCAGGTGGACAGAAGTTGGAGGGACCAGGATCTCTTaGTCCACGTGCCCCTTAGAC +
Preference number: 4 (lower is better)
Translates to: VGVMRLQAQTVPRWTEVGGTRIS*STCPLD
Trigger: GTCTAAGGGGCACGTGGAGCAAGAGATCCTGGTCCC...TCCAACTTCTGTCCACCTGGGGACAGTCTGTGCCTGTAGCCTCATGACCCCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000290942.9
ENST00000393957.7
ENST00000562206.1
ENST00000564104.5
CDS-3UTR GCA 90 bp AGGCTACAGGCACAGACTGTCCCCAGGTGGACAGAAGTTGGAGCAGGAAGAGGAGGGACCAGGATCTCTTaGTCCACGTGCCCCTTAGAC +
Preference number: 4 (lower is better)
Translates to: RLQAQTVPRWTEVGAGRGGTRIS*STCPLD
Trigger: GTCTAAGGGGCACGTGGAGCAAGAGATCCTGGTCCC...TCCTCTTCCTGCTCCAACTTCTGTCCACCTGGGGACAGTCTGTGCCTGTAGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290942.9
ENST00000393957.7
ENST00000562206.1
ENST00000564104.5
CDS-3UTR CCA 90 bp GAGGCTACAGGCACAGACTGTCCCCAGGTGGACAGAAGTTGGAGCAGGAAGAGGGCCTTGGGGTCACCATaGATGGCAAACTTGCGGAAG +
Preference number: 4 (lower is better)
Translates to: EATGTDCPQVDRSWSRKRALGSP*MANLRK
Trigger: CTTCCGCAAGTTTGCCATCCATGGTGACCCCAAGGC...CCTCTTCCTGCTCCAACTTCTGTCCACCTGGGGACAGTCTGTGCCTGTAGCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290942.9
ENST00000393957.7
ENST00000562206.1
ENST00000564104.5
CDS-3UTR CCA 90 bp GCTACAGGCACAGACTGTCCCCAGGTGGACAGAAGTTGGAGCAGGAAGAGGAGGGCCTTGGGGTCACCATaGATGGCAAACTTGCGGAAG +
Preference number: 4 (lower is better)
Translates to: ATGTDCPQVDRSWSRKRRALGSP*MANLRK
Trigger: CTTCCGCAAGTTTGCCATCCATGGTGACCCCAAGGC...CCTCCTCTTCCTGCTCCAACTTCTGTCCACCTGGGGACAGTCTGTGCCTGTAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290942.9
ENST00000393957.7
ENST00000562206.1
ENST00000564104.5
CDS-3UTR CCA 90 bp GGCTACAGGCACAGACTGTCCCCAGGTGGACAGAAGTTGGAGCAGGAAGAGGAGTCATCTCTTGCCCACTaGCCTTGGGGTCACCATGGA +
Preference number: 4 (lower is better)
Translates to: GYRHRLSPGGQKLEQEEESSLAH*PWGHHG
Trigger: TCCATGGTGACCCCAAGGCCAGTGGGCAAGAGATGA...CTCCTCTTCCTGCTCCAACTTCTGTCCACCTGGGGACAGTCTGTGCCTGTAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290942.9
ENST00000393957.7
ENST00000562206.1
ENST00000564104.5
CDS-3UTR CCA 90 bp GGCACTTGGCCAGAGCAGCAGCTTAAATATGAGGCAAGCAGTCAGGGGTTAGCCCCACCAGCTGGCAGATaGCATCGAAGGCCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: GTWPEQQLKYEASSQGLAPPAGR*HRRPPP
Trigger: AGGAGGAGGCCTTCGATGCCATCTGCCAGCTGGTGG...GGCTAACCCCTGACTGCTTGCCTCATATTTAAGCTGCTGCTCTGGCCAAGTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290942.9
ENST00000393957.7
ENST00000562206.1
ENST00000564104.5
CDS-3UTR CCA 90 bp GGCACTTGGCCAGAGCAGCAGCTTAAATATGAGGCAAGCAGTCAGGGGTTAGCCTTGCCTGCCACCAGCTaGCAGATGGCATCGAAGGCC +
Preference number: 4 (lower is better)
Translates to: GTWPEQQLKYEASSQGLALPATS*QMASKA
Trigger: GGCCTTCGATGCCATCTGCCAGCTGGTGGCAGGCAA...GGCTAACCCCTGACTGCTTGCCTCATATTTAAGCTGCTGCTCTGGCCAAGTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290942.9
ENST00000393957.7
ENST00000562206.1
ENST00000564104.5
CDS-3UTR CCA 90 bp GAGCAGCAGCTTAAATATGAGGCAAGCAGTCAGGGGTTAGCCATGCCTGGGGCTTTGCCTGCCACCAGCTaGCAGATGGCATCGAAGGCC +
Preference number: 4 (lower is better)
Translates to: EQQLKYEASSQGLAMPGALPATS*QMASKA
Trigger: GGCCTTCGATGCCATCTGCCAGCTGGTGGCAGGCAA...AGCCCCAGGCATGGCTAACCCCTGACTGCTTGCCTCATATTTAAGCTGCTGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290942.9
ENST00000393957.7
ENST00000562206.1
ENST00000564104.5
CDS-3UTR CCA 90 bp AGGCTACAGGCACAGACTGTCCCCAGGTGGACAGAAGTTGGAGCAGGAAGAGGAAGCCCGTGTATCTGCTaGTGTCCGTCAGCCGGTCTA +
Preference number: 4 (lower is better)
Translates to: RLQAQTVPRWTEVGAGRGSPCIC*CPSAGL
Trigger: TAGACCGGCTGACGGACACCAGCAGATACACGGGCT...TCCTCTTCCTGCTCCAACTTCTGTCCACCTGGGGACAGTCTGTGCCTGTAGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290942.9
ENST00000393957.7
ENST00000562206.1
ENST00000564104.5
CDS-3UTR CCA 90 bp CAGCTTAAATATGAGGCAAGCAGTCAGGGGTTAGCCATGCCTGGGGCTGGGTTGGGGGTGGCGGGCATCTaGGTCTCCTATGGGCTTCTA +
Preference number: 4 (lower is better)
Translates to: QLKYEASSQGLAMPGAGLGVAGI*VSYGLL
Trigger: TAGAAGCCCATAGGAGACCCAGATGCCCGCCACCCC...CAACCCAGCCCCAGGCATGGCTAACCCCTGACTGCTTGCCTCATATTTAAGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000562206.1
CDS-3UTR CCA 90 bp AGCAGGGAGGGGACCAGGATCTCTTGCTCCACGTGCCCCTTAGACCCAGGCCTGCTGTCCGTGGAAAGATaGATTCTTGGTCATCTCAGC +
Preference number: 4 (lower is better)
Translates to: SREGTRISCSTCPLDPGLLSVER*ILGHLS
Trigger: GCTGAGATGACCAAGAATCCATCTTTCCACGGACAG...CAGGCCTGGGTCTAAGGGGCACGTGGAGCAAGAGATCCTGGTCCCCTCCCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562206.1
CDS-3UTR TCA 90 bp AGGCTACAGGCACAGACTGTCCCCAGGTGGACAGAAGTTGGAGCAGGAAGAGGACGGGCAGGCATTCAGTaGGGACAGCATCTCTGTAAG +
Preference number: 4 (lower is better)
Translates to: RLQAQTVPRWTEVGAGRGRAGIQ*GQHLCK
Trigger: CTTACAGAGATGCTGTCCTCACTGAATGCCTGCCCG...TCCTCTTCCTGCTCCAACTTCTGTCCACCTGGGGACAGTCTGTGCCTGTAGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564104.5
CDS-3UTR GCA 90 bp GGCTACAGGCACAGACTGTCCCCAGGTGGACAGAAGTTGGAGCAGGAAGAGGAGGCTTGGCCCAGTTCTTaGCATTCATCTCTTGCCCAC +
Preference number: 4 (lower is better)
Translates to: GYRHRLSPGGQKLEQEEEAWPSS*HSSLAH
Trigger: GTGGGCAAGAGATGAATGGCAAGAACTGGGCCAAGC...CTCCTCTTCCTGCTCCAACTTCTGTCCACCTGGGGACAGTCTGTGCCTGTAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290942.9
ENST00000393957.7
ENST00000562206.1
ENST00000564104.5
CDS-3UTR GCA 90 bp CAGCTTAAATATGAGGCAAGCAGTCAGGGGTTAGCCATGCCTGGGGCTGGGTTGCATTGGCTGGCTCTTTaGCTGCCACCAGCTGGCAGA +
Preference number: 4 (lower is better)
Translates to: QLKYEASSQGLAMPGAGLHWLAL*LPPAGR
Trigger: TCTGCCAGCTGGTGGCAGGCAAAGAGCCAGCCAATG...CAACCCAGCCCCAGGCATGGCTAACCCCTGACTGCTTGCCTCATATTTAAGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290942.9
ENST00000393957.7
ENST00000562206.1
ENST00000564104.5
CDS-3UTR GCA 90 bp TGGCCAGAGCAGCAGCTTAAATATGAGGCAAGCAGTCAGGGGTTAGCCATGCCTTCGTCCAGGATGTCCTaGCGTCCCGCAATGCCCTTG +
Preference number: 4 (lower is better)
Translates to: WPEQQLKYEASSQGLAMPSSRMS*RPAMPL
Trigger: CAAGGGCATTGCGGGACGGCAGGACATCCTGGACGA...AGGCATGGCTAACCCCTGACTGCTTGCCTCATATTTAAGCTGCTGCTCTGGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290942.9
ENST00000393957.7
ENST00000562206.1
ENST00000564104.5
CDS-3UTR GCA 90 bp GTTGGGGTCATGAGGCTACAGGCACAGACTGTCCCCAGGTGGACAGAAGTTGGAGGCATCGTAGGTGCCTaGATTCTTGTAGGCGCTCAC +
Preference number: 4 (lower is better)
Translates to: VGVMRLQAQTVPRWTEVGGIVGA*ILVGAH
Trigger: GTGAGCGCCTACAAGAATGCAGGCACCTACGATGCC...TCCAACTTCTGTCCACCTGGGGACAGTCTGTGCCTGTAGCCTCATGACCCCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290942.9
ENST00000393957.7
ENST00000562206.1
ENST00000564104.5
CDS-3UTR GCA 90 bp GGCACTTGGCCAGAGCAGCAGCTTAAATATGAGGCAAGCAGTCAGGGGTTAGCCGGGACCAGGATCTCTTaGTCCACGTGCCCCTTAGAC +
Preference number: 4 (lower is better)
Translates to: GTWPEQQLKYEASSQGLAGTRIS*STCPLD
Trigger: GTCTAAGGGGCACGTGGAGCAAGAGATCCTGGTCCC...GGCTAACCCCTGACTGCTTGCCTCATATTTAAGCTGCTGCTCTGGCCAAGTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290942.9
ENST00000393957.7
ENST00000562206.1
ENST00000564104.5
CDS-3UTR GCA 90 bp GAGCAGCAGCTTAAATATGAGGCAAGCAGTCAGGGGTTAGCCATGCCTGGGGCTCCTGGCACAAGGCCTTaGTTGGGTGGAAGTGAGGGT +
Preference number: 4 (lower is better)
Translates to: EQQLKYEASSQGLAMPGAPGTRP*LGGSEG
Trigger: ACCCTCACTTCCACCCAAGCAAGGCCTTGTGCCAGG...AGCCCCAGGCATGGCTAACCCCTGACTGCTTGCCTCATATTTAAGCTGCTGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564104.5
CDS-3UTR GCA 90 bp GGCTACAGGCACAGACTGTCCCCAGGTGGACAGAAGTTGGAGCAGGAAGAGGAGCCTCTACCTCAAACCTaGAAGACCTGGGCAGGTTCT +
Preference number: 4 (lower is better)
Translates to: GYRHRLSPGGQKLEQEEEPLPQT*KTWAGS
Trigger: AGAACCTGCCCAGGTCTTGCAGGTTTGAGGTAGAGG...CTCCTCTTCCTGCTCCAACTTCTGTCCACCTGGGGACAGTCTGTGCCTGTAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564104.5
CDS-3UTR CCA 90 bp GAGCAGCAGCTTAAATATGAGGCAAGCAGTCAGGGGTTAGCCATGCCTGGGGCTAGAACGACGCAGGAATaGACCGATGGACGCGGGAGA +
Preference number: 4 (lower is better)
Translates to: EQQLKYEASSQGLAMPGARTTQE*TDGRGR
Trigger: TCTCCCGCGTCCATCGGTCCATTCCTGCGTCGTTCT...AGCCCCAGGCATGGCTAACCCCTGACTGCTTGCCTCATATTTAAGCTGCTGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290942.9
ENST00000393957.7
ENST00000562206.1
CDS-3UTR CCA 90 bp GTTGGGGTCATGAGGCTACAGGCACAGACTGTCCCCAGGTGGACAGAAGTTGGAGCCTTGGGGTCACCATaGATGGCAAACTTGCGGAAG +
Preference number: 4 (lower is better)
Translates to: VGVMRLQAQTVPRWTEVGALGSP*MANLRK
Trigger: CTTCCGCAAGTTTGCCATCCATGGTGACCCCAAGGC...TCCAACTTCTGTCCACCTGGGGACAGTCTGTGCCTGTAGCCTCATGACCCCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000290942.9
ENST00000393957.7
ENST00000562206.1
ENST00000564104.5
CDS-3UTR CCA 90 bp CCAGAGCAGCAGCTTAAATATGAGGCAAGCAGTCAGGGGTTAGCCATGCCTGGGTTGCTAAGGGCAGGATaGTGTCAGGGCAGCTCAGGG +
Preference number: 4 (lower is better)
Translates to: PEQQLKYEASSQGLAMPGLLRAG*CQGSSG
Trigger: CCCTGAGCTGCCCTGACACCATCCTGCCCTTAGCAA...CCCAGGCATGGCTAACCCCTGACTGCTTGCCTCATATTTAAGCTGCTGCTCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564104.5
CDS-3UTR CCA 90 bp CTGGGTTGGGGTCATGAGGCTACAGGCACAGACTGTCCCCAGGTGGACAGAAGTCCACAGGGAACAGAGTaGCACTGTCCAGAAAGACTG +
Preference number: 4 (lower is better)
Translates to: LGWGHEATGTDCPQVDRSPQGTE*HCPERL
Trigger: CAGTCTTTCTGGACAGTGCCACTCTGTTCCCTGTGG...ACTTCTGTCCACCTGGGGACAGTCTGTGCCTGTAGCCTCATGACCCCAACCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564104.5
CDS-3UTR GCA 90 bp GAGCAGCAGCTTAAATATGAGGCAAGCAGTCAGGGGTTAGCCATGCCTGGGGCTGCTGCTCCTGAAGTGTaGGTTCGGAAGGACAGAACG +
Preference number: 4 (lower is better)
Translates to: EQQLKYEASSQGLAMPGAAAPEV*VRKDRT
Trigger: CGTTCTGTCCTTCCGAACGCACACTTCAGGAGCAGC...AGCCCCAGGCATGGCTAACCCCTGACTGCTTGCCTCATATTTAAGCTGCTGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290942.9
ENST00000393957.7
ENST00000562206.1
CDS-3UTR GCA 90 bp GTTGGGGTCATGAGGCTACAGGCACAGACTGTCCCCAGGTGGACAGAAGTTGGAGCTTGGCCCAGTTCTTaGCATTCATCTCTTGCCCAC +
Preference number: 4 (lower is better)
Translates to: VGVMRLQAQTVPRWTEVGAWPSS*HSSLAH
Trigger: GTGGGCAAGAGATGAATGGCAAGAACTGGGCCAAGC...TCCAACTTCTGTCCACCTGGGGACAGTCTGTGCCTGTAGCCTCATGACCCCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290942.9
ENST00000393957.7
ENST00000562206.1
ENST00000564104.5
CDS-3UTR GCA 90 bp CAGCTTAAATATGAGGCAAGCAGTCAGGGGTTAGCCATGCCTGGGGCTGGGTTGCCACCTTGCAGTCCTTaGACAGCTTGGCCCAGTTCT +
Preference number: 4 (lower is better)
Translates to: QLKYEASSQGLAMPGAGLPPCSP*TAWPSS
Trigger: AGAACTGGGCCAAGCTGTGCAAGGACTGCAAGGTGG...CAACCCAGCCCCAGGCATGGCTAACCCCTGACTGCTTGCCTCATATTTAAGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290942.9
ENST00000393957.7
ENST00000562206.1
ENST00000564104.5
CDS-3UTR GCA 90 bp CAGCTTAAATATGAGGCAAGCAGTCAGGGGTTAGCCATGCCTGGGGCTGGGTTGGGCATCGTAGGTGCCTaGATTCTTGTAGGCGCTCAC +
Preference number: 4 (lower is better)
Translates to: QLKYEASSQGLAMPGAGLGIVGA*ILVGAH
Trigger: GTGAGCGCCTACAAGAATGCAGGCACCTACGATGCC...CAACCCAGCCCCAGGCATGGCTAACCCCTGACTGCTTGCCTCATATTTAAGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290942.9
ENST00000393957.7
ENST00000562206.1
ENST00000564104.5
CDS-3UTR GCA 90 bp GGCACTTGGCCAGAGCAGCAGCTTAAATATGAGGCAAGCAGTCAGGGGTTAGCCCCTTGGCATCGTAGGTaGCTGCATTCTTGTAGGCGC +
Preference number: 4 (lower is better)
Translates to: GTWPEQQLKYEASSQGLAPWHRR*LHSCRR
Trigger: GCGCCTACAAGAATGCAGGCACCTACGATGCCAAGG...GGCTAACCCCTGACTGCTTGCCTCATATTTAAGCTGCTGCTCTGGCCAAGTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290942.9
ENST00000393957.7
ENST00000562206.1
ENST00000564104.5
CDS-3UTR CCA 90 bp GAGCAGCAGCTTAAATATGAGGCAAGCAGTCAGGGGTTAGCCATGCCTGGGGCTGCTGCCATGCCACCTTaGTTCACCAAGGGTAACGTC +
Preference number: 4 (lower is better)
Translates to: EQQLKYEASSQGLAMPGAAAMPP*FTKGNV
Trigger: GACGTTACCCTTGGTGAACCAAGGTGGCATGGCAGC...AGCCCCAGGCATGGCTAACCCCTGACTGCTTGCCTCATATTTAAGCTGCTGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290942.9
ENST00000562206.1
CDS-3UTR CCA 90 bp GTTGGGGTCATGAGGCTACAGGCACAGACTGTCCCCAGGTGGACAGAAGTTGGATGGGGTCACCATGGATaGCAAACTTGCGGAAGCTCT +
Preference number: 4 (lower is better)
Translates to: VGVMRLQAQTVPRWTEVGWGHHG*QTCGSS
Trigger: AGAGCTTCCGCAAGTTTGCCATCCATGGTGACCCCA...TCCAACTTCTGTCCACCTGGGGACAGTCTGTGCCTGTAGCCTCATGACCCCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000290942.9
ENST00000393957.7
ENST00000562206.1
ENST00000564104.5
CDS-3UTR CCA 90 bp GAGCAGCAGCTTAAATATGAGGCAAGCAGTCAGGGGTTAGCCATGCCTGGGGCTTCATCTCTTGCCCACTaGCCTTGGGGTCACCATGGA +
Preference number: 4 (lower is better)
Translates to: EQQLKYEASSQGLAMPGASSLAH*PWGHHG
Trigger: TCCATGGTGACCCCAAGGCCAGTGGGCAAGAGATGA...AGCCCCAGGCATGGCTAACCCCTGACTGCTTGCCTCATATTTAAGCTGCTGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000290942.9
ENST00000393957.7
ENST00000562206.1
ENST00000564104.5
CDS-3UTR CCA 90 bp CCAGAGCAGCAGCTTAAATATGAGGCAAGCAGTCAGGGGTTAGCCATGCCTGGGTCATCTCTTGCCCACTaGCCTTGGGGTCACCATGGA +
Preference number: 4 (lower is better)
Translates to: PEQQLKYEASSQGLAMPGSSLAH*PWGHHG
Trigger: TCCATGGTGACCCCAAGGCCAGTGGGCAAGAGATGA...CCCAGGCATGGCTAACCCCTGACTGCTTGCCTCATATTTAAGCTGCTGCTCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290942.9
ENST00000393957.7
ENST00000562206.1
ENST00000564104.5
CDS-3UTR CCA 90 bp GGCTACAGGCACAGACTGTCCCCAGGTGGACAGAAGTTGGAGCAGGAAGAGGAGCTCACTTCTTCACCTTaGCATCGTAGGTGCCTGCAT +
Preference number: 4 (lower is better)
Translates to: GYRHRLSPGGQKLEQEEELTSSP*HRRCLH
Trigger: ATGCAGGCACCTACGATGCCAAGGTGAAGAAGTGAG...CTCCTCTTCCTGCTCCAACTTCTGTCCACCTGGGGACAGTCTGTGCCTGTAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290942.9
ENST00000393957.7
ENST00000562206.1
ENST00000564104.5
CDS-3UTR CCA 90 bp CAGCTTAAATATGAGGCAAGCAGTCAGGGGTTAGCCATGCCTGGGGCTGGGTTGCAGACTGTCCCCAGGTaGACAGAAGTTGGAGCAGGA +
Preference number: 4 (lower is better)
Translates to: QLKYEASSQGLAMPGAGLQTVPR*TEVGAG
Trigger: TCCTGCTCCAACTTCTGTCCACCTGGGGACAGTCTG...CAACCCAGCCCCAGGCATGGCTAACCCCTGACTGCTTGCCTCATATTTAAGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000290942.9
ENST00000393957.7
ENST00000562206.1
ENST00000564104.5
CDS-3UTR CCA 90 bp CCAGAGCAGCAGCTTAAATATGAGGCAAGCAGTCAGGGGTTAGCCATGCCTGGGTCCCACTGGGACAGCTaGAGTCATCAATCAGCCGGA +
Preference number: 4 (lower is better)
Translates to: PEQQLKYEASSQGLAMPGSHWDS*SHQSAG
Trigger: TCCGGCTGATTGATGACTCCAGCTGTCCCAGTGGGA...CCCAGGCATGGCTAACCCCTGACTGCTTGCCTCATATTTAAGCTGCTGCTCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562206.1
CDS-3UTR TCA 90 bp AGGCTACAGGCACAGACTGTCCCCAGGTGGACAGAAGTTGGAGCAGGAAGAGGAGCAGGGTTCAGCAGATaGAATAATGATGCCCACAGG +
Preference number: 4 (lower is better)
Translates to: RLQAQTVPRWTEVGAGRGAGFSR*NNDAHR
Trigger: CCTGTGGGCATCATTATTTCATCTGCTGAACCCTGC...TCCTCTTCCTGCTCCAACTTCTGTCCACCTGGGGACAGTCTGTGCCTGTAGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564104.5
CDS-3UTR GCA 90 bp TGGCCAGAGCAGCAGCTTAAATATGAGGCAAGCAGTCAGGGGTTAGCCATGCCTCATGTCTGTGCTCGCTaGCATGCCACCTTGGTTCAC +
Preference number: 4 (lower is better)
Translates to: WPEQQLKYEASSQGLAMPHVCAR*HATLVH
Trigger: GTGAACCAAGGTGGCATGGCAGCGAGCACAGACATG...AGGCATGGCTAACCCCTGACTGCTTGCCTCATATTTAAGCTGCTGCTCTGGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290942.9
ENST00000562206.1
CDS-3UTR GCA 90 bp TGGCCAGAGCAGCAGCTTAAATATGAGGCAAGCAGTCAGGGGTTAGCCATGCCTCCACCTTGCAGTCCTTaGACAGCTTGGCCCAGTTCT +
Preference number: 4 (lower is better)
Translates to: WPEQQLKYEASSQGLAMPPPCSP*TAWPSS
Trigger: AGAACTGGGCCAAGCTGTGCAAGGACTGCAAGGTGG...AGGCATGGCTAACCCCTGACTGCTTGCCTCATATTTAAGCTGCTGCTCTGGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290942.9
ENST00000393957.7
ENST00000562206.1
ENST00000564104.5
CDS-3UTR GCA 90 bp TGGCCAGAGCAGCAGCTTAAATATGAGGCAAGCAGTCAGGGGTTAGCCATGCCTGGCATCGTAGGTGCCTaGATTCTTGTAGGCGCTCAC +
Preference number: 4 (lower is better)
Translates to: WPEQQLKYEASSQGLAMPGIVGA*ILVGAH
Trigger: GTGAGCGCCTACAAGAATGCAGGCACCTACGATGCC...AGGCATGGCTAACCCCTGACTGCTTGCCTCATATTTAAGCTGCTGCTCTGGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290942.9
ENST00000393957.7
ENST00000562206.1
ENST00000564104.5
CDS-3UTR GCA 90 bp GTTGGGGTCATGAGGCTACAGGCACAGACTGTCCCCAGGTGGACAGAAGTTGGAAAGGGAGGGTGGTGCTaGTTGGAGAATGTTGCTAAG +
Preference number: 4 (lower is better)
Translates to: VGVMRLQAQTVPRWTEVGKGGWC*LENVAK
Trigger: CTTAGCAACATTCTCCAAGCAGCACCACCCTCCCTT...TCCAACTTCTGTCCACCTGGGGACAGTCTGTGCCTGTAGCCTCATGACCCCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564104.5
CDS-3UTR GCA 90 bp CAGCTTAAATATGAGGCAAGCAGTCAGGGGTTAGCCATGCCTGGGGCTGGGTTGGCTAAGGGAGGGTGGTaGTGCTTGGAGAATGTTGCT +
Preference number: 4 (lower is better)
Translates to: QLKYEASSQGLAMPGAGLAKGGW*CLENVA
Trigger: AGCAACATTCTCCAAGCAGCACCACCCTCCCTTAGC...CAACCCAGCCCCAGGCATGGCTAACCCCTGACTGCTTGCCTCATATTTAAGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564104.5
CDS-3UTR CCA 90 bp CAGCTTAAATATGAGGCAAGCAGTCAGGGGTTAGCCATGCCTGGGGCTGGGTTGTGGGGTCACCATGGATaGCAAACTTGCGGAAGCTCT +
Preference number: 4 (lower is better)
Translates to: QLKYEASSQGLAMPGAGLWGHHG*QTCGSS
Trigger: AGAGCTTCCGCAAGTTTGCCATCCATGGTGACCCCA...CAACCCAGCCCCAGGCATGGCTAACCCCTGACTGCTTGCCTCATATTTAAGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000290942.9
ENST00000393957.7
ENST00000562206.1
ENST00000564104.5
CDS-3UTR CCA 90 bp AGGCTACAGGCACAGACTGTCCCCAGGTGGACAGAAGTTGGAGCAGGAAGAGGAGCTCACTCCTGTCCGTaGAAAGATGGATTCTTGGTC +
Preference number: 4 (lower is better)
Translates to: RLQAQTVPRWTEVGAGRGAHSCP*KDGFLV
Trigger: GACCAAGAATCCATCTTTCCACGGACAGGAGTGAGC...TCCTCTTCCTGCTCCAACTTCTGTCCACCTGGGGACAGTCTGTGCCTGTAGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562206.1
CDS-3UTR CCA 90 bp TTATTGAGGTCTGGGTTAAAATTAGGCACTTGGCCAGAGCAGCAGCTTAAATATGCTGGGGCCCACGGGTaGGGCACGCCAGCACTCCCT +
Preference number: 4 (lower is better)
Translates to: LLRSGLKLGTWPEQQLKYAGAHG*GTPALP
Trigger: AGGGAGTGCTGGCGTGCCCCACCCGTGGGCCCCAGC...ATATTTAAGCTGCTGCTCTGGCCAAGTGCCTAATTTTAACCCAGACCTCAATAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564104.5
CDS-3UTR CCA 90 bp GAGCAGCAGCTTAAATATGAGGCAAGCAGTCAGGGGTTAGCCATGCCTGGGGCTGAGGGTGGTGCTGCTTaGAGAATGTTGCTAAGGGCA +
Preference number: 4 (lower is better)
Translates to: EQQLKYEASSQGLAMPGAEGGAA*RMLLRA
Trigger: TGCCCTTAGCAACATTCTCCAAGCAGCACCACCCTC...AGCCCCAGGCATGGCTAACCCCTGACTGCTTGCCTCATATTTAAGCTGCTGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564104.5
CDS-3UTR CCA 90 bp GGCACTTGGCCAGAGCAGCAGCTTAAATATGAGGCAAGCAGTCAGGGGTTAGCCCTCACTTCTTCACCTTaGCATCGTAGGTGCCTGCAT +
Preference number: 4 (lower is better)
Translates to: GTWPEQQLKYEASSQGLALTSSP*HRRCLH
Trigger: ATGCAGGCACCTACGATGCCAAGGTGAAGAAGTGAG...GGCTAACCCCTGACTGCTTGCCTCATATTTAAGCTGCTGCTCTGGCCAAGTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290942.9
ENST00000393957.7
ENST00000562206.1
ENST00000564104.5
CDS-3UTR CCA 90 bp TTATTGAGGTCTGGGTTAAAATTAGGCACTTGGCCAGAGCAGCAGCTTAAATATGGCCGCAGAGCAGCCTaGGTCAGAGGCCTGGTGGGC +
Preference number: 4 (lower is better)
Translates to: LLRSGLKLGTWPEQQLKYGRRAA*VRGLVG
Trigger: GCCCACCAGGCCTCTGACCCAGGCTGCTCTGCGGCC...ATATTTAAGCTGCTGCTCTGGCCAAGTGCCTAATTTTAACCCAGACCTCAATAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290942.9
ENST00000393957.7
ENST00000564104.5
CDS-3UTR CCA 90 bp CCAGAGCAGCAGCTTAAATATGAGGCAAGCAGTCAGGGGTTAGCCATGCCTGGGGGAAAGATGGATTCTTaGTCATCTCAGCGCGGTCAG +
Preference number: 4 (lower is better)
Translates to: PEQQLKYEASSQGLAMPGGKMDS*SSQRGQ
Trigger: CTGACCGCGCTGAGATGACCAAGAATCCATCTTTCC...CCCAGGCATGGCTAACCCCTGACTGCTTGCCTCATATTTAAGCTGCTGCTCTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000562206.1
CDS-3UTR CCA 90 bp GGCACTTGGCCAGAGCAGCAGCTTAAATATGAGGCAAGCAGTCAGGGGTTAGCCGTTGCTAAGGGAGGGTaGTGCTGCTTGGAGAATGTT +
Preference number: 4 (lower is better)
Translates to: GTWPEQQLKYEASSQGLAVAKGG*CCLENV
Trigger: AACATTCTCCAAGCAGCACCACCCTCCCTTAGCAAC...GGCTAACCCCTGACTGCTTGCCTCATATTTAAGCTGCTGCTCTGGCCAAGTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564104.5
CDS-3UTR CCA 90 bp CCAGAGCAGCAGCTTAAATATGAGGCAAGCAGTCAGGGGTTAGCCATGCCTGGGACAGTTTGTGAAGCCTaGAGACGGTTGCTAAGGGAG +
Preference number: 4 (lower is better)
Translates to: PEQQLKYEASSQGLAMPGTVCEA*RRLLRE
Trigger: CTCCCTTAGCAACCGTCTCCAGGCTTCACAAACTGT...CCCAGGCATGGCTAACCCCTGACTGCTTGCCTCATATTTAAGCTGCTGCTCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564104.5
CDS-3UTR CCA 90 bp TGGCCAGAGCAGCAGCTTAAATATGAGGCAAGCAGTCAGGGGTTAGCCATGCCTCAAACCTGCAAGACCTaGGCAGGTTCTGCTACAGAG +
Preference number: 4 (lower is better)
Translates to: WPEQQLKYEASSQGLAMPQTCKT*AGSATE
Trigger: CTCTGTAGCAGAACCTGCCCAGGTCTTGCAGGTTTG...AGGCATGGCTAACCCCTGACTGCTTGCCTCATATTTAAGCTGCTGCTCTGGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564104.5
CDS-3UTR GCA 90 bp TTATTGAGGTCTGGGTTAAAATTAGGCACTTGGCCAGAGCAGCAGCTTAAATATCTGTGCTCGCTGCCATaGCACCCTCGCGGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: LLRSGLKLGTWPEQQLKYLCSLP*HPRGCS
Trigger: GGAGCAGCCGCGAGGGTGGCATGGCAGCGAGCACAG...ATATTTAAGCTGCTGCTCTGGCCAAGTGCCTAATTTTAACCCAGACCTCAATAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393957.7
CDS-3UTR CCA 90 bp GGCTGGGTTGGGGTCATGAGGCTACAGGCACAGACTGTCCCCAGGTGGACAGAATTAAAATTAGGCACTTaGCCAGAGCAGCAGCTTAAA +
Preference number: 4 (lower is better)
Translates to: GWVGVMRLQAQTVPRWTELKLGT*PEQQLK
Trigger: TTTAAGCTGCTGCTCTGGCCAAGTGCCTAATTTTAA...TTCTGTCCACCTGGGGACAGTCTGTGCCTGTAGCCTCATGACCCCAACCCAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000290942.9
ENST00000393957.7
ENST00000564104.5
CDS-3UTR CCA 90 bp GGCTACAGGCACAGACTGTCCCCAGGTGGACAGAAGTTGGAGCAGGAAGAGGAGTTAAAATTAGGCACTTaGCCAGAGCAGCAGCTTAAA +
Preference number: 4 (lower is better)
Translates to: GYRHRLSPGGQKLEQEEELKLGT*PEQQLK
Trigger: TTTAAGCTGCTGCTCTGGCCAAGTGCCTAATTTTAA...CTCCTCTTCCTGCTCCAACTTCTGTCCACCTGGGGACAGTCTGTGCCTGTAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290942.9
ENST00000393957.7
ENST00000564104.5
CDS-3UTR CCA 90 bp GTTGGGGTCATGAGGCTACAGGCACAGACTGTCCCCAGGTGGACAGAAGTTGGATTAAAATTAGGCACTTaGCCAGAGCAGCAGCTTAAA +
Preference number: 4 (lower is better)
Translates to: VGVMRLQAQTVPRWTEVGLKLGT*PEQQLK
Trigger: TTTAAGCTGCTGCTCTGGCCAAGTGCCTAATTTTAA...TCCAACTTCTGTCCACCTGGGGACAGTCTGTGCCTGTAGCCTCATGACCCCAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000290942.9
ENST00000393957.7
ENST00000564104.5
CDS-3UTR CCA 90 bp TTATTGAGGTCTGGGTTAAAATTAGGCACTTGGCCAGAGCAGCAGCTTAAATATCCACCAGCTGGCAGATaGCATCGAAGGCCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: LLRSGLKLGTWPEQQLKYPPAGR*HRRPPP
Trigger: AGGAGGAGGCCTTCGATGCCATCTGCCAGCTGGTGG...ATATTTAAGCTGCTGCTCTGGCCAAGTGCCTAATTTTAACCCAGACCTCAATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290942.9
ENST00000393957.7
ENST00000564104.5
CDS-3UTR CCA 90 bp TTATTGAGGTCTGGGTTAAAATTAGGCACTTGGCCAGAGCAGCAGCTTAAATATAGAACGACGCAGGAATaGACCGATGGACGCGGGAGA +
Preference number: 4 (lower is better)
Translates to: LLRSGLKLGTWPEQQLKYRTTQE*TDGRGR
Trigger: TCTCCCGCGTCCATCGGTCCATTCCTGCGTCGTTCT...ATATTTAAGCTGCTGCTCTGGCCAAGTGCCTAATTTTAACCCAGACCTCAATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290942.9
ENST00000393957.7
CDS-3UTR CCA 90 bp TTATTGAGGTCTGGGTTAAAATTAGGCACTTGGCCAGAGCAGCAGCTTAAATATCTTGCCCACTGGCCTTaGGGTCACCATGGATGGCAA +
Preference number: 4 (lower is better)
Translates to: LLRSGLKLGTWPEQQLKYLAHWP*GHHGWQ
Trigger: TTGCCATCCATGGTGACCCCAAGGCCAGTGGGCAAG...ATATTTAAGCTGCTGCTCTGGCCAAGTGCCTAATTTTAACCCAGACCTCAATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290942.9
ENST00000393957.7
ENST00000564104.5
CDS-3UTR CCA 90 bp CAGCTTAAATATGAGGCAAGCAGTCAGGGGTTAGCCATGCCTGGGGCTGGGTTGGTCTTTATTGAGGTCTaGGTTAAAATTAGGCACTTG +
Preference number: 4 (lower is better)
Translates to: QLKYEASSQGLAMPGAGLVFIEV*VKIRHL
Trigger: CAAGTGCCTAATTTTAACCCAGACCTCAATAAAGAC...CAACCCAGCCCCAGGCATGGCTAACCCCTGACTGCTTGCCTCATATTTAAGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000393957.7
ENST00000564104.5
CDS-3UTR CCA 90 bp TTATTGAGGTCTGGGTTAAAATTAGGCACTTGGCCAGAGCAGCAGCTTAAATATAGCTTGGGGCTGGCCTaGCCACAGTTTGTGAAGCCT +
Preference number: 4 (lower is better)
Translates to: LLRSGLKLGTWPEQQLKYSLGLA*PQFVKP
Trigger: AGGCTTCACAAACTGTGGCCAGGCCAGCCCCAAGCT...ATATTTAAGCTGCTGCTCTGGCCAAGTGCCTAATTTTAACCCAGACCTCAATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564104.5
CDS-3UTR GCA 90 bp TTATTGAGGTCTGGGTTAAAATTAGGCACTTGGCCAGAGCAGCAGCTTAAATATGCTGCTCCTGAAGTGTaGGTTCGGAAGGACAGAACG +
Preference number: 4 (lower is better)
Translates to: LLRSGLKLGTWPEQQLKYAAPEV*VRKDRT
Trigger: CGTTCTGTCCTTCCGAACGCACACTTCAGGAGCAGC...ATATTTAAGCTGCTGCTCTGGCCAAGTGCCTAATTTTAACCCAGACCTCAATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290942.9
ENST00000393957.7
CDS-3UTR GCA 90 bp TTATTGAGGTCTGGGTTAAAATTAGGCACTTGGCCAGAGCAGCAGCTTAAATATTTCCGTCAGCCACCTTaGAGTCCTTGCACAGCTTGG +
Preference number: 4 (lower is better)
Translates to: LLRSGLKLGTWPEQQLKYFRQPP*SPCTAW
Trigger: CCAAGCTGTGCAAGGACTGCAAGGTGGCTGACGGAA...ATATTTAAGCTGCTGCTCTGGCCAAGTGCCTAATTTTAACCCAGACCTCAATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290942.9
ENST00000393957.7
ENST00000564104.5
CDS-3UTR CCA 90 bp TTATTGAGGTCTGGGTTAAAATTAGGCACTTGGCCAGAGCAGCAGCTTAAATATGCTGCCATGCCACCTTaGTTCACCAAGGGTAACGTC +
Preference number: 4 (lower is better)
Translates to: LLRSGLKLGTWPEQQLKYAAMPP*FTKGNV
Trigger: GACGTTACCCTTGGTGAACCAAGGTGGCATGGCAGC...ATATTTAAGCTGCTGCTCTGGCCAAGTGCCTAATTTTAACCCAGACCTCAATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290942.9
CDS-3UTR CCA 90 bp TGGCCAGAGCAGCAGCTTAAATATGAGGCAAGCAGTCAGGGGTTAGCCATGCCTGTCTTTATTGAGGTCTaGGTTAAAATTAGGCACTTG +
Preference number: 4 (lower is better)
Translates to: WPEQQLKYEASSQGLAMPVFIEV*VKIRHL
Trigger: CAAGTGCCTAATTTTAACCCAGACCTCAATAAAGAC...AGGCATGGCTAACCCCTGACTGCTTGCCTCATATTTAAGCTGCTGCTCTGGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393957.7
ENST00000564104.5
CDS-3UTR GCA 90 bp TTATTGAGGTCTGGGTTAAAATTAGGCACTTGGCCAGAGCAGCAGCTTAAATATGCTTGGCCCAGTTCTTaGCATTCATCTCTTGCCCAC +
Preference number: 4 (lower is better)
Translates to: LLRSGLKLGTWPEQQLKYAWPSS*HSSLAH
Trigger: GTGGGCAAGAGATGAATGGCAAGAACTGGGCCAAGC...ATATTTAAGCTGCTGCTCTGGCCAAGTGCCTAATTTTAACCCAGACCTCAATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290942.9
ENST00000393957.7
ENST00000564104.5
CDS CCA 90 bp GGGCTGCGAGGTGGAATGCTTGGGGCCAGGGCAGGGCCGCTCAGCTaGCTCCTCGGCTGGGACCGCCGGAGGTTGGGACCCTTTCCAGGC +
Preference number: 5 (lower is better)
Translates to: GLRGGMLGARAGPLS*LLGWDRRRLGPFPG
Trigger: GCCTGGAAAGGGTCCCAACCTCCGGCGGTCCCAGCCGAGGAGCCAGCTGAGCGGCCCTGCCCTGGCCCCAAGCATTCCACCTCGCAGCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562206.1
CDS GCA 90 bp GTGGAAGTGAGGGTGGCAGAGCAGGCCCCCTCCCTGGAAGCTCCATaGCAAGCTGGCTTGGGGCCAGGCCAGGCTGCTGGTCGGGCAGGC +
Preference number: 5 (lower is better)
Translates to: VEVRVAEQAPSLEAP*QAGLGPGQAAGRAG
Trigger: GCCTGCCCGACCAGCAGCCTGGCCTGGCCCCAAGCCAGCTTGGCATGGAGCTTCCAGGGAGGGGGCCTGCTCTGCCACCCTCACTTCCAC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000564104.5
CDS CCA 90 bp GCGCTGGGTTGCAGGCCGCAGCCCCATGGGTCTGCAGGCCATGGATaGAGTGGCCACACCCGTGAACTGGAGCCACCCGTCCCGCTCCCA +
Preference number: 5 (lower is better)
Translates to: ALGCRPQPHGSAGHG*SGHTRELEPPVPLP
Trigger: TGGGAGCGGGACGGGTGGCTCCAGTTCACGGGTGTGGCCACTCCATCCATGGCCTGCAGACCCATGGGGCTGCGGCCTGCAACCCAGCGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562206.1
CDS CCA 90 bp GAGGGTGGCAGAGCAGGCCCCCTCCCTGGAAGCTCCATGCCAAGCTaGCTTGGGGCCAGGCCAGGCTGCTGGTCGGGCAGGCATTCAGTG +
Preference number: 5 (lower is better)
Translates to: EGGRAGPLPGSSMPS*LGARPGCWSGRHSV
Trigger: CACTGAATGCCTGCCCGACCAGCAGCCTGGCCTGGCCCCAAGCCAGCTTGGCATGGAGCTTCCAGGGAGGGGGCCTGCTCTGCCACCCTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000564104.5
CDS CCA 90 bp CTCCCACTGGGACAGCTGGAGTCATCAATCAGCCGGACCAGGAGGTaGGGGCTGCGAGGTGGAATGCTTGGGGCCAGGGCAGGGCCGCTC +
Preference number: 5 (lower is better)
Translates to: LPLGQLESSISRTRR*GLRGGMLGARAGPL
Trigger: GAGCGGCCCTGCCCTGGCCCCAAGCATTCCACCTCGCAGCCCCCACCTCCTGGTCCGGCTGATTGATGACTCCAGCTGTCCCAGTGGGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562206.1
CDS CCA 90 bp TGGCAGAGCAGGCCCCCTCCCTGGAAGCTCCATGCCAAGCTGGCTTaGGGCCAGGCCAGGCTGCTGGTCGGGCAGGCATTCAGTGAGGAC +
Preference number: 5 (lower is better)
Translates to: WQSRPPPWKLHAKLA*GQARLLVGQAFSED
Trigger: GTCCTCACTGAATGCCTGCCCGACCAGCAGCCTGGCCTGGCCCCAAGCCAGCTTGGCATGGAGCTTCCAGGGAGGGGGCCTGCTCTGCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564104.5
CDS-3UTR CAA 90 bp GTCCAGCAGGGAGGGGACCAGGATCTCTTGCTCCACGTGCCCCTTAGACCCAGGTGGGACCGCCGGAGGTaGGGACCCTTTCCAGGCTGC +
Preference number: 5 (lower is better)
Translates to: VQQGGDQDLLLHVPLRPRWDRRR*GPFPGC
Trigger: GCAGCCTGGAAAGGGTCCCAACCTCCGGCGGTCCCA...CCTGGGTCTAAGGGGCACGTGGAGCAAGAGATCCTGGTCCCCTCCCTGCTGGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562206.1
CDS-3UTR CAA 90 bp AGGTCCAGCAGGGAGGGGACCAGGATCTCTTGCTCCACGTGCCCCTTAGACCCATCAGGTGGCGCTGGGTaGCAGGCCGCAGCCCCATGG +
Preference number: 5 (lower is better)
Translates to: RSSREGTRISCSTCPLDPSGGAG*QAAAPW
Trigger: CCATGGGGCTGCGGCCTGCAACCCAGCGCCACCTGA...TGGGTCTAAGGGGCACGTGGAGCAAGAGATCCTGGTCCCCTCCCTGCTGGACCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000562206.1
CDS CCA 90 bp GCTGCTCCTGAAGTGTGCGTTCGGAAGGACAGAACGACGCAGGAATaGACCGATGGACGCGGGAGACCAGGCGGCTCCGCAGCTCCGCTC +
Preference number: 5 (lower is better)
Translates to: AAPEVCVRKDRTTQE*TDGRGRPGGSAAPL
Trigger: GAGCGGAGCTGCGGAGCCGCCTGGTCTCCCGCGTCCATCGGTCCATTCCTGCGTCGTTCTGTCCTTCCGAACGCACACTTCAGGAGCAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290942.9
ENST00000393957.7
ENST00000561537.1
ENST00000562206.1
CDS-3UTR CAA 90 bp GGCTGGGTTGGGGTCATGAGGCTACAGGCACAGACTGTCCCCAGGTGGACAGAATGCGAGGTGGAATGCTaGGGGCCAGGGCAGGGCCGC +
Preference number: 5 (lower is better)
Translates to: GWVGVMRLQAQTVPRWTECEVEC*GPGQGR
Trigger: GCGGCCCTGCCCTGGCCCCAAGCATTCCACCTCGCA...TTCTGTCCACCTGGGGACAGTCTGTGCCTGTAGCCTCATGACCCCAACCCAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000562206.1
CDS-3UTR CAA 90 bp AGGTCCAGCAGGGAGGGGACCAGGATCTCTTGCTCCACGTGCCCCTTAGACCCAGCTGGGGCCCTGGCTTaGTCTGGCCCTGGCACAAGG +
Preference number: 5 (lower is better)
Translates to: RSSREGTRISCSTCPLDPAGALA*SGPGTR
Trigger: CCTTGTGCCAGGGCCAGACAAAGCCAGGGCCCCAGC...TGGGTCTAAGGGGCACGTGGAGCAAGAGATCCTGGTCCCCTCCCTGCTGGACCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000564104.5
CDS TCA 90 bp CCTGGCTTTGTCTGGCCCTGGCACAAGGCCTTGCTTGGGTGGAAGTaGGGGTGGCAGAGCAGGCCCCCTCCCTGGAAGCTCCATGCCAAG +
Preference number: 5 (lower is better)
Translates to: PGFVWPWHKALLGWK*GWQSRPPPWKLHAK
Trigger: CTTGGCATGGAGCTTCCAGGGAGGGGGCCTGCTCTGCCACCCTCACTTCCACCCAAGCAAGGCCTTGTGCCAGGGCCAGACAAAGCCAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000564104.5
CDS CCA 90 bp CCCATGGGTCTGCAGGCCATGGATGGAGTGGCCACACCCGTGAACTaGAGCCACCCGTCCCGCTCCCACTGGGACAGCTGGAGTCATCAA +
Preference number: 5 (lower is better)
Translates to: PMGLQAMDGVATPVN*SHPSRSHWDSWSHQ
Trigger: TTGATGACTCCAGCTGTCCCAGTGGGAGCGGGACGGGTGGCTCCAGTTCACGGGTGTGGCCACTCCATCCATGGCCTGCAGACCCATGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562206.1
CDS CCA 90 bp CTCAAACCTGCAAGACCTGGGCAGGTTCTGCTACAGAGTTGGTGCTaGAGCTGCCTGGGGAGAGGGGCCCGTCACTGTCGCCCTGGGCCA +
Preference number: 5 (lower is better)
Translates to: LKPARPGQVLLQSWC*SCLGRGARHCRPGP
Trigger: TGGCCCAGGGCGACAGTGACGGGCCCCTCTCCCCAGGCAGCTCCAGCACCAACTCTGTAGCAGAACCTGCCCAGGTCTTGCAGGTTTGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564104.5
CDS-3UTR CAA 90 bp AGGTCCAGCAGGGAGGGGACCAGGATCTCTTGCTCCACGTGCCCCTTAGACCCAGATGCCACAGGGTGCTaGGCCCAAGCACTGGGCGGA +
Preference number: 5 (lower is better)
Translates to: RSSREGTRISCSTCPLDPDATGC*AQALGG
Trigger: TCCGCCCAGTGCTTGGGCCAAGCACCCTGTGGCATC...TGGGTCTAAGGGGCACGTGGAGCAAGAGATCCTGGTCCCCTCCCTGCTGGACCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290942.9
ENST00000562206.1
CDS CCA 90 bp CTGCCATGCCACCTTGGTTCACCAAGGGTAACGTCCAGGGGAGCTTaGATGCCACAGGGTGCTTGGCCCAAGCACTGGGCGGATCCTGCG +
Preference number: 5 (lower is better)
Translates to: LPCHLGSPRVTSRGA*MPQGAWPKHWADPA
Trigger: CGCAGGATCCGCCCAGTGCTTGGGCCAAGCACCCTGTGGCATCCAAGCTCCCCTGGACGTTACCCTTGGTGAACCAAGGTGGCATGGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290942.9
ENST00000562206.1
CDS-3UTR CAA 90 bp AGCAGGGAGGGGACCAGGATCTCTTGCTCCACGTGCCCCTTAGACCCAGGCCTGTCTTGCCCACTGGCCTaGGGGTCACCATGGATGGCA +
Preference number: 5 (lower is better)
Translates to: SREGTRISCSTCPLDPGLSCPLA*GSPWMA
Trigger: TGCCATCCATGGTGACCCCAAGGCCAGTGGGCAAGA...CAGGCCTGGGTCTAAGGGGCACGTGGAGCAAGAGATCCTGGTCCCCTCCCTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000290942.9
ENST00000393957.7
ENST00000562206.1
ENST00000564104.5
CDS-3UTR CAA 90 bp TGGCAGGTCCAGCAGGGAGGGGACCAGGATCTCTTGCTCCACGTGCCCCTTAGATGGCTTCCTGGCCCCTaGCCACCGACTGGTGCTGTA +
Preference number: 5 (lower is better)
Translates to: WQVQQGGDQDLLLHVPLRWLPGP*PPTGAV
Trigger: TACAGCACCAGTCGGTGGCAAGGGGCCAGGAAGCCA...TCTAAGGGGCACGTGGAGCAAGAGATCCTGGTCCCCTCCCTGCTGGACCTGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000564104.5
CDS-3UTR CAA 90 bp AGCAGGGAGGGGACCAGGATCTCTTGCTCCACGTGCCCCTTAGACCCAGGCCTGGGTTCTGCTACAGAGTaGGTGCTGGAGCTGCCTGGG +
Preference number: 5 (lower is better)
Translates to: SREGTRISCSTCPLDPGLGSATE*VLELPG
Trigger: CCCAGGCAGCTCCAGCACCAACTCTGTAGCAGAACC...CAGGCCTGGGTCTAAGGGGCACGTGGAGCAAGAGATCCTGGTCCCCTCCCTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564104.5
CDS CCA 90 bp GTGGAAAGATGGATTCTTGGTCATCTCAGCGCGGTCAGGTGGCGCTaGGTTGCAGGCCGCAGCCCCATGGGTCTGCAGGCCATGGATGGA +
Preference number: 5 (lower is better)
Translates to: VERWILGHLSAVRWR*VAGRSPMGLQAMDG
Trigger: TCCATCCATGGCCTGCAGACCCATGGGGCTGCGGCCTGCAACCCAGCGCCACCTGACCGCGCTGAGATGACCAAGAATCCATCTTTCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562206.1
CDS-3UTR CAA 90 bp AGGTCCAGCAGGGAGGGGACCAGGATCTCTTGCTCCACGTGCCCCTTAGACCCATCTTGCCCACTGGCCTaGGGGTCACCATGGATGGCA +
Preference number: 5 (lower is better)
Translates to: RSSREGTRISCSTCPLDPSCPLA*GSPWMA
Trigger: TGCCATCCATGGTGACCCCAAGGCCAGTGGGCAAGA...TGGGTCTAAGGGGCACGTGGAGCAAGAGATCCTGGTCCCCTCCCTGCTGGACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000290942.9
ENST00000393957.7
ENST00000562206.1
ENST00000564104.5
CDS-3UTR CAA 90 bp AGCAGGGAGGGGACCAGGATCTCTTGCTCCACGTGCCCCTTAGACCCAGGCCTGCTTGCCATTCATCTCTaGCCCACTGGCCTTGGGGTC +
Preference number: 5 (lower is better)
Translates to: SREGTRISCSTCPLDPGLLAIHL*PTGLGV
Trigger: GACCCCAAGGCCAGTGGGCAAGAGATGAATGGCAAG...CAGGCCTGGGTCTAAGGGGCACGTGGAGCAAGAGATCCTGGTCCCCTCCCTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000290942.9
ENST00000393957.7
ENST00000562206.1
ENST00000564104.5
CDS-3UTR CAA 90 bp CAGCAGGGAGGGGACCAGGATCTCTTGCTCCACGTGCCCCTTAGACCCAGGCCTCTTGCCATTCATCTCTaGCCCACTGGCCTTGGGGTC +
Preference number: 5 (lower is better)
Translates to: QQGGDQDLLLHVPLRPRPLAIHL*PTGLGV
Trigger: GACCCCAAGGCCAGTGGGCAAGAGATGAATGGCAAG...AGGCCTGGGTCTAAGGGGCACGTGGAGCAAGAGATCCTGGTCCCCTCCCTGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000290942.9
ENST00000393957.7
ENST00000562206.1
ENST00000564104.5
CDS-3UTR CAA 90 bp AGCAGGGAGGGGACCAGGATCTCTTGCTCCACGTGCCCCTTAGACCCAGGCCTGTTAGTGACGCCCACATaGGCTGGCTCTTTGCCTGCC +
Preference number: 5 (lower is better)
Translates to: SREGTRISCSTCPLDPGLLVTPT*AGSLPA
Trigger: GGCAGGCAAAGAGCCAGCCAATGTGGGCGTCACTAA...CAGGCCTGGGTCTAAGGGGCACGTGGAGCAAGAGATCCTGGTCCCCTCCCTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290942.9
ENST00000393957.7
ENST00000562206.1
ENST00000564104.5
CDS-3UTR CAA 90 bp AGGTCCAGCAGGGAGGGGACCAGGATCTCTTGCTCCACGTGCCCCTTAGACCCAGGGGACCAGGATCTCTaGCTCCACGTGCCCCTTAGA +
Preference number: 5 (lower is better)
Translates to: RSSREGTRISCSTCPLDPGDQDL*LHVPLR
Trigger: TCTAAGGGGCACGTGGAGCAAGAGATCCTGGTCCCC...TGGGTCTAAGGGGCACGTGGAGCAAGAGATCCTGGTCCCCTCCCTGCTGGACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000290942.9
ENST00000393957.7
ENST00000562206.1
ENST00000564104.5
CDS TCA 90 bp GCGGGCATCTGGGTCTCCTATGGGCTTCTACCTCGCGGCTGCTCCTaGAGTGTGCGTTCGGAAGGACAGAACGACGCAGGAATGGACCGA +
Preference number: 5 (lower is better)
Translates to: AGIWVSYGLLPRGCS*SVRSEGQNDAGMDR
Trigger: TCGGTCCATTCCTGCGTCGTTCTGTCCTTCCGAACGCACACTTCAGGAGCAGCCGCGAGGTAGAAGCCCATAGGAGACCCAGATGCCCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562206.1
CDS GCA 90 bp TGCGGAAGCTCTCCTCCAGCCCAGCCATGTCTGTGCTCGCTGCCATaGCACCCTATAGAGACCCACCTGGGTCATCTCCCAGCCAATCTG +
Preference number: 5 (lower is better)
Translates to: CGSSPPAQPCLCSLP*HPIETHLGHLPANL
Trigger: CAGATTGGCTGGGAGATGACCCAGGTGGGTCTCTATAGGGTGGCATGGCAGCGAGCACAGACATGGCTGGGCTGGAGGAGAGCTTCCGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564104.5
CDS CCA 90 bp ATCCTGCGTGCAGTGCTCACTCCTGTCCGTGGAAAGATGGATTCTTaGTCATCTCAGCGCGGTCAGGTGGCGCTGGGTTGCAGGCCGCAG +
Preference number: 5 (lower is better)
Translates to: ILRAVLTPVRGKMDS*SSQRGQVALGCRPQ
Trigger: CTGCGGCCTGCAACCCAGCGCCACCTGACCGCGCTGAGATGACCAAGAATCCATCTTTCCACGGACAGGAGTGAGCACTGCACGCAGGAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562206.1
CDS CCA 90 bp CTGGGCGGATCCTGCGTGCAGTGCTCACTCCTGTCCGTGGAAAGATaGATTCTTGGTCATCTCAGCGCGGTCAGGTGGCGCTGGGTTGCA +
Preference number: 5 (lower is better)
Translates to: LGGSCVQCSLLSVER*ILGHLSAVRWRWVA
Trigger: TGCAACCCAGCGCCACCTGACCGCGCTGAGATGACCAAGAATCCATCTTTCCACGGACAGGAGTGAGCACTGCACGCAGGATCCGCCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562206.1
CDS CCA 90 bp CCCAAGCACTGGGCGGATCCTGCGTGCAGTGCTCACTCCTGTCCGTaGAAAGATGGATTCTTGGTCATCTCAGCGCGGTCAGGTGGCGCT +
Preference number: 5 (lower is better)
Translates to: PKHWADPACSAHSCP*KDGFLVISARSGGA
Trigger: AGCGCCACCTGACCGCGCTGAGATGACCAAGAATCCATCTTTCCACGGACAGGAGTGAGCACTGCACGCAGGATCCGCCCAGTGCTTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562206.1
CDS-3UTR CAA 90 bp GGCTGGGTTGGGGTCATGAGGCTACAGGCACAGACTGTCCCCAGGTGGACAGAAAACGTCCAGGGGAGCTaGGATGCCACAGGGTGCTTG +
Preference number: 5 (lower is better)
Translates to: GWVGVMRLQAQTVPRWTENVQGS*DATGCL
Trigger: CAAGCACCCTGTGGCATCCAAGCTCCCCTGGACGTT...TTCTGTCCACCTGGGGACAGTCTGTGCCTGTAGCCTCATGACCCCAACCCAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000290942.9
ENST00000562206.1
CDS-3UTR CAA 90 bp AGCAGGGAGGGGACCAGGATCTCTTGCTCCACGTGCCCCTTAGACCCAGGCCTGTTCCCCTTGAATCTCTaGGTCGCCAGCTCTTCCAGG +
Preference number: 5 (lower is better)
Translates to: SREGTRISCSTCPLDPGLFPLNL*VASSSR
Trigger: CCTGGAAGAGCTGGCGACCAAGAGATTCAAGGGGAA...CAGGCCTGGGTCTAAGGGGCACGTGGAGCAAGAGATCCTGGTCCCCTCCCTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000290942.9
ENST00000393957.7
ENST00000562206.1
ENST00000564104.5
CDS-3UTR CAA 90 bp CAGCAGGGAGGGGACCAGGATCTCTTGCTCCACGTGCCCCTTAGACCCAGGCCTTCCTTGCTCTTCCCCTaGAATCTCTTGGTCGCCAGC +
Preference number: 5 (lower is better)
Translates to: QQGGDQDLLLHVPLRPRPSLLFP*NLLVAS
Trigger: GCTGGCGACCAAGAGATTCAAGGGGAAGAGCAAGGA...AGGCCTGGGTCTAAGGGGCACGTGGAGCAAGAGATCCTGGTCCCCTCCCTGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000290942.9
ENST00000393957.7
ENST00000562206.1
ENST00000564104.5
CDS-3UTR CAA 90 bp GTCCAGCAGGGAGGGGACCAGGATCTCTTGCTCCACGTGCCCCTTAGACCCAGGTCGAAGGCCTCCTCCTaGCTCTTCCCCTTGAATCTC +
Preference number: 5 (lower is better)
Translates to: VQQGGDQDLLLHVPLRPRSKASS*LFPLNL
Trigger: GAGATTCAAGGGGAAGAGCAAGGAGGAGGCCTTCGA...CCTGGGTCTAAGGGGCACGTGGAGCAAGAGATCCTGGTCCCCTCCCTGCTGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000290942.9
ENST00000393957.7
ENST00000562206.1
ENST00000564104.5
CDS-3UTR CAA 90 bp GGCTGGGTTGGGGTCATGAGGCTACAGGCACAGACTGTCCCCAGGTGGACAGAAGAAGCCTGGAGACGGTaGCTAAGGGAGGGTGGTGCT +
Preference number: 5 (lower is better)
Translates to: GWVGVMRLQAQTVPRWTEEAWRR*LREGGA
Trigger: AGCACCACCCTCCCTTAGCAACCGTCTCCAGGCTTC...TTCTGTCCACCTGGGGACAGTCTGTGCCTGTAGCCTCATGACCCCAACCCAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564104.5
CDS-3UTR CAA 90 bp GGCTACAGGCACAGACTGTCCCCAGGTGGACAGAAGTTGGAGCAGGAAGAGGAGCCGGGAGGCACGGTCTaGTCACTAATGCCAGCCCTG +
Preference number: 5 (lower is better)
Translates to: GYRHRLSPGGQKLEQEEEPGGTV*SLMPAL
Trigger: CAGGGCTGGCATTAGTGACAAGACCGTGCCTCCCGG...CTCCTCTTCCTGCTCCAACTTCTGTCCACCTGGGGACAGTCTGTGCCTGTAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564104.5
CDS GCA 90 bp TCTGGGTCTCCTATGGGCTTCTACCTCGCGGCTGCTCCTGAAGTGTaGGTTCGGAAGGACAGAACGACGCAGGAATGGACCGATGGACGC +
Preference number: 5 (lower is better)
Translates to: SGSPMGFYLAAAPEV*VRKDRTTQEWTDGR
Trigger: GCGTCCATCGGTCCATTCCTGCGTCGTTCTGTCCTTCCGAACGCACACTTCAGGAGCAGCCGCGAGGTAGAAGCCCATAGGAGACCCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562206.1
CDS GCA 90 bp GCCACAGGGTGCTTGGCCCAAGCACTGGGCGGATCCTGCGTGCAGTaGTCACTCCTGTCCGTGGAAAGATGGATTCTTGGTCATCTCAGC +
Preference number: 5 (lower is better)
Translates to: ATGCLAQALGGSCVQ*SLLSVERWILGHLS
Trigger: GCTGAGATGACCAAGAATCCATCTTTCCACGGACAGGAGTGAGCACTGCACGCAGGATCCGCCCAGTGCTTGGGCCAAGCACCCTGTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562206.1
CDS GCA 90 bp GGATGGCAAACTTGCGGAAGCTCTCCTCCAGCCCAGCCATGTCTGTaGTCGCTGCCATGCCACCCTATAGAGACCCACCTGGGTCATCTC +
Preference number: 5 (lower is better)
Translates to: GWQTCGSSPPAQPCL*SLPCHPIETHLGHL
Trigger: GAGATGACCCAGGTGGGTCTCTATAGGGTGGCATGGCAGCGAGCACAGACATGGCTGGGCTGGAGGAGAGCTTCCGCAAGTTTGCCATCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564104.5
CDS CCA 90 bp ATCGTGCAGGATACTGATTGGGGTGGCGGGCATCTGGGTCTCCTATaGGCTTCTACCTCGCGGCTGCTCCTGAAGTGTGCGTTCGGAAGG +
Preference number: 5 (lower is better)
Translates to: IVQDTDWGGGHLGLL*ASTSRLLLKCAFGR
Trigger: CCTTCCGAACGCACACTTCAGGAGCAGCCGCGAGGTAGAAGCCCATAGGAGACCCAGATGCCCGCCACCCCAATCAGTATCCTGCACGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562206.1
CDS-3UTR CAA 90 bp GGCACTTGGCCAGAGCAGCAGCTTAAATATGAGGCAAGCAGTCAGGGGTTAGCCGATGCCACAGGGTGCTaGGCCCAAGCACTGGGCGGA +
Preference number: 5 (lower is better)
Translates to: GTWPEQQLKYEASSQGLADATGC*AQALGG
Trigger: TCCGCCCAGTGCTTGGGCCAAGCACCCTGTGGCATC...GGCTAACCCCTGACTGCTTGCCTCATATTTAAGCTGCTGCTCTGGCCAAGTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290942.9
ENST00000562206.1
CDS-3UTR CAA 90 bp GGCTGGGTTGGGGTCATGAGGCTACAGGCACAGACTGTCCCCAGGTGGACAGAACTTGCCATTCATCTCTaGCCCACTGGCCTTGGGGTC +
Preference number: 5 (lower is better)
Translates to: GWVGVMRLQAQTVPRWTELAIHL*PTGLGV
Trigger: GACCCCAAGGCCAGTGGGCAAGAGATGAATGGCAAG...TTCTGTCCACCTGGGGACAGTCTGTGCCTGTAGCCTCATGACCCCAACCCAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000290942.9
ENST00000393957.7
ENST00000562206.1
ENST00000564104.5
CDS-3UTR CAA 90 bp GAGGCTACAGGCACAGACTGTCCCCAGGTGGACAGAAGTTGGAGCAGGAAGAGGGCCACCTTGCAGTCCTaGCACAGCTTGGCCCAGTTC +
Preference number: 5 (lower is better)
Translates to: EATGTDCPQVDRSWSRKRATLQS*HSLAQF
Trigger: GAACTGGGCCAAGCTGTGCAAGGACTGCAAGGTGGC...CCTCTTCCTGCTCCAACTTCTGTCCACCTGGGGACAGTCTGTGCCTGTAGCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290942.9
ENST00000393957.7
ENST00000562206.1
ENST00000564104.5
CDS-3UTR CAA 90 bp GTCCAGCAGGGAGGGGACCAGGATCTCTTGCTCCACGTGCCCCTTAGACCCAGGCGAGCAGACTTCCCCTaGACTTTGGAGAAGACGATG +
Preference number: 5 (lower is better)
Translates to: VQQGGDQDLLLHVPLRPRRADFP*TLEKTM
Trigger: CATCGTCTTCTCCAAAGTCAAGGGGAAGTCTGCTCG...CCTGGGTCTAAGGGGCACGTGGAGCAAGAGATCCTGGTCCCCTCCCTGCTGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000290942.9
ENST00000393957.7
ENST00000562206.1
ENST00000564104.5
CDS-3UTR CAA 90 bp TGGCAGGTCCAGCAGGGAGGGGACCAGGATCTCTTGCTCCACGTGCCCCTTAGATTCCCCTTGAATCTCTaGGTCGCCAGCTCTTCCAGG +
Preference number: 5 (lower is better)
Translates to: WQVQQGGDQDLLLHVPLRFPLNL*VASSSR
Trigger: CCTGGAAGAGCTGGCGACCAAGAGATTCAAGGGGAA...TCTAAGGGGCACGTGGAGCAAGAGATCCTGGTCCCCTCCCTGCTGGACCTGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000290942.9
ENST00000393957.7
ENST00000562206.1
ENST00000564104.5
CDS-3UTR CAA 90 bp CTGGGTTGGGGTCATGAGGCTACAGGCACAGACTGTCCCCAGGTGGACAGAAGTGGGGACCAGGATCTCTaGCTCCACGTGCCCCTTAGA +
Preference number: 5 (lower is better)
Translates to: LGWGHEATGTDCPQVDRSGDQDL*LHVPLR
Trigger: TCTAAGGGGCACGTGGAGCAAGAGATCCTGGTCCCC...ACTTCTGTCCACCTGGGGACAGTCTGTGCCTGTAGCCTCATGACCCCAACCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000290942.9
ENST00000393957.7
ENST00000562206.1
ENST00000564104.5
CDS-3UTR CAA 90 bp AGCAGGGAGGGGACCAGGATCTCTTGCTCCACGTGCCCCTTAGACCCAGGCCTGGCTGCTTGGAGAATGTaGCTAAGGGCAGGATGGTGT +
Preference number: 5 (lower is better)
Translates to: SREGTRISCSTCPLDPGLAAWRM*LRAGWC
Trigger: ACACCATCCTGCCCTTAGCAACATTCTCCAAGCAGC...CAGGCCTGGGTCTAAGGGGCACGTGGAGCAAGAGATCCTGGTCCCCTCCCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564104.5
CDS GCA 90 bp TGGATGCCACAGGGTGCTTGGCCCAAGCACTGGGCGGATCCTGCGTaGAGTGCTCACTCCTGTCCGTGGAAAGATGGATTCTTGGTCATC +
Preference number: 5 (lower is better)
Translates to: WMPQGAWPKHWADPA*SAHSCPWKDGFLVI
Trigger: GATGACCAAGAATCCATCTTTCCACGGACAGGAGTGAGCACTGCACGCAGGATCCGCCCAGTGCTTGGGCCAAGCACCCTGTGGCATCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562206.1
CDS GCA 90 bp AGCTTGGATGCCACAGGGTGCTTGGCCCAAGCACTGGGCGGATCCTaGGTGCAGTGCTCACTCCTGTCCGTGGAAAGATGGATTCTTGGT +
Preference number: 5 (lower is better)
Translates to: SLDATGCLAQALGGS*VQCSLLSVERWILG
Trigger: ACCAAGAATCCATCTTTCCACGGACAGGAGTGAGCACTGCACGCAGGATCCGCCCAGTGCTTGGGCCAAGCACCCTGTGGCATCCAAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562206.1
CDS GCA 90 bp TTCCCCTCCCCCAAGCCCAGAACATCCCAGCCTCTACCTCAAACCTaGAAGACCTGGGCAGGTTCTGCTACAGAGTTGGTGCTGGAGCTG +
Preference number: 5 (lower is better)
Translates to: FPSPKPRTSQPLPQT*KTWAGSATELVLEL
Trigger: CAGCTCCAGCACCAACTCTGTAGCAGAACCTGCCCAGGTCTTGCAGGTTTGAGGTAGAGGCTGGGATGTTCTGGGCTTGGGGGAGGGGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000564104.5
CDS-3UTR CAA 90 bp GAGGCTACAGGCACAGACTGTCCCCAGGTGGACAGAAGTTGGAGCAGGAAGAGGCCATGGATGGCAAACTaGCGGAAGCTCTCCTCCAGC +
Preference number: 5 (lower is better)
Translates to: EATGTDCPQVDRSWSRKRPWMAN*RKLSSS
Trigger: GCTGGAGGAGAGCTTCCGCAAGTTTGCCATCCATGG...CCTCTTCCTGCTCCAACTTCTGTCCACCTGGGGACAGTCTGTGCCTGTAGCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290942.9
ENST00000393957.7
ENST00000562206.1
ENST00000564104.5
CDS-3UTR CAA 90 bp AGGCTACAGGCACAGACTGTCCCCAGGTGGACAGAAGTTGGAGCAGGAAGAGGAGCCACCTTGCAGTCCTaGCACAGCTTGGCCCAGTTC +
Preference number: 5 (lower is better)
Translates to: RLQAQTVPRWTEVGAGRGATLQS*HSLAQF
Trigger: GAACTGGGCCAAGCTGTGCAAGGACTGCAAGGTGGC...TCCTCTTCCTGCTCCAACTTCTGTCCACCTGGGGACAGTCTGTGCCTGTAGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290942.9
ENST00000393957.7
ENST00000562206.1
ENST00000564104.5
CDS-3UTR CAA 90 bp AGGTCCAGCAGGGAGGGGACCAGGATCTCTTGCTCCACGTGCCCCTTAGACCCACGAGCAGACTTCCCCTaGACTTTGGAGAAGACGATG +
Preference number: 5 (lower is better)
Translates to: RSSREGTRISCSTCPLDPRADFP*TLEKTM
Trigger: CATCGTCTTCTCCAAAGTCAAGGGGAAGTCTGCTCG...TGGGTCTAAGGGGCACGTGGAGCAAGAGATCCTGGTCCCCTCCCTGCTGGACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000290942.9
ENST00000393957.7
ENST00000562206.1
ENST00000564104.5
CDS-3UTR CAA 90 bp CTGGGTTGGGGTCATGAGGCTACAGGCACAGACTGTCCCCAGGTGGACAGAAGTTTAGTGACGCCCACATaGGCTGGCTCTTTGCCTGCC +
Preference number: 5 (lower is better)
Translates to: LGWGHEATGTDCPQVDRSLVTPT*AGSLPA
Trigger: GGCAGGCAAAGAGCCAGCCAATGTGGGCGTCACTAA...ACTTCTGTCCACCTGGGGACAGTCTGTGCCTGTAGCCTCATGACCCCAACCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290942.9
ENST00000393957.7
ENST00000562206.1
ENST00000564104.5
CDS GCA 90 bp AGGGCGGTCTTCCCAAGCCTCACTTCTTCACCTTGGCATCGTAGGTaGCTGCATTCTTGTAGGCGCTCACGTAGCCACTGTCGTCCAGGA +
Preference number: 5 (lower is better)
Translates to: RAVFPSLTSSPWHRR*LHSCRRSRSHCRPG
Trigger: TCCTGGACGACAGTGGCTACGTGAGCGCCTACAAGAATGCAGGCACCTACGATGCCAAGGTGAAGAAGTGAGGCTTGGGAAGACCGCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290942.9
ENST00000393957.7
ENST00000562206.1
ENST00000564104.5
CDS CCA 90 bp TCTTGCCATTCATCTCTTGCCCACTGGCCTTGGGGTCACCATGGATaGCAAACTTGCGGAAGCTCTCCTCCAGCCCAGCCATGTCTGTGC +
Preference number: 5 (lower is better)
Translates to: SCHSSLAHWPWGHHG*QTCGSSPPAQPCLC
Trigger: GCACAGACATGGCTGGGCTGGAGGAGAGCTTCCGCAAGTTTGCCATCCATGGTGACCCCAAGGCCAGTGGGCAAGAGATGAATGGCAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290942.9
ENST00000393957.7
ENST00000561537.1
ENST00000562206.1
ENST00000564104.5
CDS CCA 90 bp GCTTTAGTGACGCCCACATTGGCTGGCTCTTTGCCTGCCACCAGCTaGCAGATGGCATCGAAGGCCTCCTCCTTGCTCTTCCCCTTGAAT +
Preference number: 5 (lower is better)
Translates to: ALVTPTLAGSLPATS*QMASKASSLLFPLN
Trigger: ATTCAAGGGGAAGAGCAAGGAGGAGGCCTTCGATGCCATCTGCCAGCTGGTGGCAGGCAAAGAGCCAGCCAATGTGGGCGTCACTAAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290942.9
ENST00000393957.7
ENST00000562206.1
ENST00000564104.5
CDS CCA 90 bp GTTTGTGAAGCCTGGAGACGGTTGCTAAGGGAGGGTGGTGCTGCTTaGAGAATGTTGCTAAGGGCAGGATGGTGTCAGGGCAGCTCAGGG +
Preference number: 5 (lower is better)
Translates to: VCEAWRRLLREGGAA*RMLLRAGWCQGSSG
Trigger: CCCTGAGCTGCCCTGACACCATCCTGCCCTTAGCAACATTCTCCAAGCAGCACCACCCTCCCTTAGCAACCGTCTCCAGGCTTCACAAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564104.5
CDS-3UTR CAA 90 bp CCAGAGCAGCAGCTTAAATATGAGGCAAGCAGTCAGGGGTTAGCCATGCCTGGGTCTTGCCCACTGGCCTaGGGGTCACCATGGATGGCA +
Preference number: 5 (lower is better)
Translates to: PEQQLKYEASSQGLAMPGSCPLA*GSPWMA
Trigger: TGCCATCCATGGTGACCCCAAGGCCAGTGGGCAAGA...CCCAGGCATGGCTAACCCCTGACTGCTTGCCTCATATTTAAGCTGCTGCTCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290942.9
ENST00000393957.7
ENST00000562206.1
ENST00000564104.5
CDS-3UTR CAA 90 bp CAGCTTAAATATGAGGCAAGCAGTCAGGGGTTAGCCATGCCTGGGGCTGGGTTGTCTTGCCCACTGGCCTaGGGGTCACCATGGATGGCA +
Preference number: 5 (lower is better)
Translates to: QLKYEASSQGLAMPGAGLSCPLA*GSPWMA
Trigger: TGCCATCCATGGTGACCCCAAGGCCAGTGGGCAAGA...CAACCCAGCCCCAGGCATGGCTAACCCCTGACTGCTTGCCTCATATTTAAGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000290942.9
ENST00000393957.7
ENST00000562206.1
ENST00000564104.5
CDS-3UTR CAA 90 bp GTTGGGGTCATGAGGCTACAGGCACAGACTGTCCCCAGGTGGACAGAAGTTGGACTTGCCATTCATCTCTaGCCCACTGGCCTTGGGGTC +
Preference number: 5 (lower is better)
Translates to: VGVMRLQAQTVPRWTEVGLAIHL*PTGLGV
Trigger: GACCCCAAGGCCAGTGGGCAAGAGATGAATGGCAAG...TCCAACTTCTGTCCACCTGGGGACAGTCTGTGCCTGTAGCCTCATGACCCCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000290942.9
ENST00000393957.7
ENST00000562206.1
ENST00000564104.5
CDS-3UTR CAA 90 bp GGCACTTGGCCAGAGCAGCAGCTTAAATATGAGGCAAGCAGTCAGGGGTTAGCCGCCACCTTGCAGTCCTaGCACAGCTTGGCCCAGTTC +
Preference number: 5 (lower is better)
Translates to: GTWPEQQLKYEASSQGLAATLQS*HSLAQF
Trigger: GAACTGGGCCAAGCTGTGCAAGGACTGCAAGGTGGC...GGCTAACCCCTGACTGCTTGCCTCATATTTAAGCTGCTGCTCTGGCCAAGTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290942.9
ENST00000393957.7
ENST00000562206.1
ENST00000564104.5
CDS-3UTR CAA 90 bp CCAGAGCAGCAGCTTAAATATGAGGCAAGCAGTCAGGGGTTAGCCATGCCTGGGGCCACCTTGCAGTCCTaGCACAGCTTGGCCCAGTTC +
Preference number: 5 (lower is better)
Translates to: PEQQLKYEASSQGLAMPGATLQS*HSLAQF
Trigger: GAACTGGGCCAAGCTGTGCAAGGACTGCAAGGTGGC...CCCAGGCATGGCTAACCCCTGACTGCTTGCCTCATATTTAAGCTGCTGCTCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290942.9
ENST00000393957.7
ENST00000562206.1
ENST00000564104.5
CDS-3UTR CAA 90 bp CTGGGTTGGGGTCATGAGGCTACAGGCACAGACTGTCCCCAGGTGGACAGAAGTTTCCCCTTGAATCTCTaGGTCGCCAGCTCTTCCAGG +
Preference number: 5 (lower is better)
Translates to: LGWGHEATGTDCPQVDRSFPLNL*VASSSR
Trigger: CCTGGAAGAGCTGGCGACCAAGAGATTCAAGGGGAA...ACTTCTGTCCACCTGGGGACAGTCTGTGCCTGTAGCCTCATGACCCCAACCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000290942.9
ENST00000393957.7
ENST00000562206.1
ENST00000564104.5
CDS-3UTR CAA 90 bp GCTACAGGCACAGACTGTCCCCAGGTGGACAGAAGTTGGAGCAGGAAGAGGAGGTCGAAGGCCTCCTCCTaGCTCTTCCCCTTGAATCTC +
Preference number: 5 (lower is better)
Translates to: ATGTDCPQVDRSWSRKRRSKASS*LFPLNL
Trigger: GAGATTCAAGGGGAAGAGCAAGGAGGAGGCCTTCGA...CCTCCTCTTCCTGCTCCAACTTCTGTCCACCTGGGGACAGTCTGTGCCTGTAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290942.9
ENST00000393957.7
ENST00000562206.1
ENST00000564104.5
CDS-3UTR CAA 90 bp AGGCTACAGGCACAGACTGTCCCCAGGTGGACAGAAGTTGGAGCAGGAAGAGGATTAGTGACGCCCACATaGGCTGGCTCTTTGCCTGCC +
Preference number: 5 (lower is better)
Translates to: RLQAQTVPRWTEVGAGRGLVTPT*AGSLPA
Trigger: GGCAGGCAAAGAGCCAGCCAATGTGGGCGTCACTAA...TCCTCTTCCTGCTCCAACTTCTGTCCACCTGGGGACAGTCTGTGCCTGTAGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290942.9
ENST00000393957.7
ENST00000562206.1
ENST00000564104.5
CDS-3UTR CAA 90 bp GAGCAGCAGCTTAAATATGAGGCAAGCAGTCAGGGGTTAGCCATGCCTGGGGCTGGGGACCAGGATCTCTaGCTCCACGTGCCCCTTAGA +
Preference number: 5 (lower is better)
Translates to: EQQLKYEASSQGLAMPGAGDQDL*LHVPLR
Trigger: TCTAAGGGGCACGTGGAGCAAGAGATCCTGGTCCCC...AGCCCCAGGCATGGCTAACCCCTGACTGCTTGCCTCATATTTAAGCTGCTGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000290942.9
ENST00000393957.7
ENST00000562206.1
ENST00000564104.5
CDS-3UTR CAA 90 bp GGCACTTGGCCAGAGCAGCAGCTTAAATATGAGGCAAGCAGTCAGGGGTTAGCCGGGGACCAGGATCTCTaGCTCCACGTGCCCCTTAGA +
Preference number: 5 (lower is better)
Translates to: GTWPEQQLKYEASSQGLAGDQDL*LHVPLR
Trigger: TCTAAGGGGCACGTGGAGCAAGAGATCCTGGTCCCC...GGCTAACCCCTGACTGCTTGCCTCATATTTAAGCTGCTGCTCTGGCCAAGTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000290942.9
ENST00000393957.7
ENST00000562206.1
ENST00000564104.5
CDS TCA 90 bp CCACCTCCTGGGAACATGAGAAGCAGGGGCTGCTTAGGGCTCACTTaGCTTTGGAGAAGACGATGTCCACATCGGTCCCTGTCACGGACT +
Preference number: 5 (lower is better)
Translates to: PPPGNMRSRGCLGLT*LWRRRCPHRSLSRT
Trigger: AGTCCGTGACAGGGACCGATGTGGACATCGTCTTCTCCAAAGTCAAGTGAGCCCTAAGCAGCCCCTGCTTCTCATGTTCCCAGGAGGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561537.1
CDS GCA 90 bp CGGTCTTCCCAAGCCTCACTTCTTCACCTTGGCATCGTAGGTGCCTaGATTCTTGTAGGCGCTCACGTAGCCACTGTCGTCCAGGATGTC +
Preference number: 5 (lower is better)
Translates to: RSSQASLLHLGIVGA*ILVGAHVATVVQDV
Trigger: GACATCCTGGACGACAGTGGCTACGTGAGCGCCTACAAGAATGCAGGCACCTACGATGCCAAGGTGAAGAAGTGAGGCTTGGGAAGACCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290942.9
ENST00000393957.7
ENST00000562206.1
ENST00000564104.5
CDS-3UTR CAA 90 bp TGGCCAGAGCAGCAGCTTAAATATGAGGCAAGCAGTCAGGGGTTAGCCATGCCTAACGTCCAGGGGAGCTaGGATGCCACAGGGTGCTTG +
Preference number: 5 (lower is better)
Translates to: WPEQQLKYEASSQGLAMPNVQGS*DATGCL
Trigger: CAAGCACCCTGTGGCATCCAAGCTCCCCTGGACGTT...AGGCATGGCTAACCCCTGACTGCTTGCCTCATATTTAAGCTGCTGCTCTGGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290942.9
ENST00000562206.1
CDS-3UTR CAA 90 bp GGCTACAGGCACAGACTGTCCCCAGGTGGACAGAAGTTGGAGCAGGAAGAGGAGAGCTTGGCCCAGTTCTaGCCATTCATCTCTTGCCCA +
Preference number: 5 (lower is better)
Translates to: GYRHRLSPGGQKLEQEEESLAQF*PFISCP
Trigger: TGGGCAAGAGATGAATGGCAAGAACTGGGCCAAGCT...CTCCTCTTCCTGCTCCAACTTCTGTCCACCTGGGGACAGTCTGTGCCTGTAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290942.9
ENST00000393957.7
ENST00000562206.1
ENST00000564104.5
CDS-3UTR CAA 90 bp GAGGCTACAGGCACAGACTGTCCCCAGGTGGACAGAAGTTGGAGCAGGAAGAGGCGAGCAGACTTCCCCTaGACTTTGGAGAAGACGATG +
Preference number: 5 (lower is better)
Translates to: EATGTDCPQVDRSWSRKRRADFP*TLEKTM
Trigger: CATCGTCTTCTCCAAAGTCAAGGGGAAGTCTGCTCG...CCTCTTCCTGCTCCAACTTCTGTCCACCTGGGGACAGTCTGTGCCTGTAGCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290942.9
ENST00000393957.7
ENST00000562206.1
ENST00000564104.5
CDS-3UTR CAA 90 bp GAGCAGCAGCTTAAATATGAGGCAAGCAGTCAGGGGTTAGCCATGCCTGGGGCTTTAGTGACGCCCACATaGGCTGGCTCTTTGCCTGCC +
Preference number: 5 (lower is better)
Translates to: EQQLKYEASSQGLAMPGALVTPT*AGSLPA
Trigger: GGCAGGCAAAGAGCCAGCCAATGTGGGCGTCACTAA...AGCCCCAGGCATGGCTAACCCCTGACTGCTTGCCTCATATTTAAGCTGCTGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290942.9
ENST00000393957.7
ENST00000562206.1
ENST00000564104.5
CDS-3UTR CAA 90 bp AGGCTACAGGCACAGACTGTCCCCAGGTGGACAGAAGTTGGAGCAGGAAGAGGAAGCTTGGCCCAGTTCTaGCCATTCATCTCTTGCCCA +
Preference number: 5 (lower is better)
Translates to: RLQAQTVPRWTEVGAGRGSLAQF*PFISCP
Trigger: TGGGCAAGAGATGAATGGCAAGAACTGGGCCAAGCT...TCCTCTTCCTGCTCCAACTTCTGTCCACCTGGGGACAGTCTGTGCCTGTAGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290942.9
ENST00000393957.7
ENST00000562206.1
ENST00000564104.5
CDS-3UTR CAA 90 bp GTTGGGGTCATGAGGCTACAGGCACAGACTGTCCCCAGGTGGACAGAAGTTGGAAGCTTGGCCCAGTTCTaGCCATTCATCTCTTGCCCA +
Preference number: 5 (lower is better)
Translates to: VGVMRLQAQTVPRWTEVGSLAQF*PFISCP
Trigger: TGGGCAAGAGATGAATGGCAAGAACTGGGCCAAGCT...TCCAACTTCTGTCCACCTGGGGACAGTCTGTGCCTGTAGCCTCATGACCCCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290942.9
ENST00000393957.7
ENST00000562206.1
ENST00000564104.5
CDS-3UTR CAA 90 bp CAGCTTAAATATGAGGCAAGCAGTCAGGGGTTAGCCATGCCTGGGGCTGGGTTGTCCTTGCTCTTCCCCTaGAATCTCTTGGTCGCCAGC +
Preference number: 5 (lower is better)
Translates to: QLKYEASSQGLAMPGAGLSLLFP*NLLVAS
Trigger: GCTGGCGACCAAGAGATTCAAGGGGAAGAGCAAGGA...CAACCCAGCCCCAGGCATGGCTAACCCCTGACTGCTTGCCTCATATTTAAGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000290942.9
ENST00000393957.7
ENST00000562206.1
ENST00000564104.5
CDS-3UTR CAA 90 bp GGCACTTGGCCAGAGCAGCAGCTTAAATATGAGGCAAGCAGTCAGGGGTTAGCCTCCTTGCTCTTCCCCTaGAATCTCTTGGTCGCCAGC +
Preference number: 5 (lower is better)
Translates to: GTWPEQQLKYEASSQGLASLLFP*NLLVAS
Trigger: GCTGGCGACCAAGAGATTCAAGGGGAAGAGCAAGGA...GGCTAACCCCTGACTGCTTGCCTCATATTTAAGCTGCTGCTCTGGCCAAGTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290942.9
ENST00000393957.7
ENST00000562206.1
ENST00000564104.5
CDS-3UTR CAA 90 bp GGCACTTGGCCAGAGCAGCAGCTTAAATATGAGGCAAGCAGTCAGGGGTTAGCCTCGAAGGCCTCCTCCTaGCTCTTCCCCTTGAATCTC +
Preference number: 5 (lower is better)
Translates to: GTWPEQQLKYEASSQGLASKASS*LFPLNL
Trigger: GAGATTCAAGGGGAAGAGCAAGGAGGAGGCCTTCGA...GGCTAACCCCTGACTGCTTGCCTCATATTTAAGCTGCTGCTCTGGCCAAGTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290942.9
ENST00000393957.7
ENST00000562206.1
ENST00000564104.5
CDS-3UTR CAA 90 bp CTGGGTTGGGGTCATGAGGCTACAGGCACAGACTGTCCCCAGGTGGACAGAAGTTGGAAAGATGGATTCTaGGTCATCTCAGCGCGGTCA +
Preference number: 5 (lower is better)
Translates to: LGWGHEATGTDCPQVDRSWKDGF*VISARS
Trigger: TGACCGCGCTGAGATGACCAAGAATCCATCTTTCCA...ACTTCTGTCCACCTGGGGACAGTCTGTGCCTGTAGCCTCATGACCCCAACCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562206.1
CDS-3UTR CAA 90 bp GGCACTTGGCCAGAGCAGCAGCTTAAATATGAGGCAAGCAGTCAGGGGTTAGCCCGAGCAGACTTCCCCTaGACTTTGGAGAAGACGATG +
Preference number: 5 (lower is better)
Translates to: GTWPEQQLKYEASSQGLARADFP*TLEKTM
Trigger: CATCGTCTTCTCCAAAGTCAAGGGGAAGTCTGCTCG...GGCTAACCCCTGACTGCTTGCCTCATATTTAAGCTGCTGCTCTGGCCAAGTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290942.9
ENST00000393957.7
ENST00000562206.1
ENST00000564104.5
CDS-3UTR CAA 90 bp TGGCCAGAGCAGCAGCTTAAATATGAGGCAAGCAGTCAGGGGTTAGCCATGCCTTCCTTGCTCTTCCCCTaGAATCTCTTGGTCGCCAGC +
Preference number: 5 (lower is better)
Translates to: WPEQQLKYEASSQGLAMPSLLFP*NLLVAS
Trigger: GCTGGCGACCAAGAGATTCAAGGGGAAGAGCAAGGA...AGGCATGGCTAACCCCTGACTGCTTGCCTCATATTTAAGCTGCTGCTCTGGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290942.9
ENST00000393957.7
ENST00000562206.1
ENST00000564104.5
CDS-3UTR CAA 90 bp TGGCCAGAGCAGCAGCTTAAATATGAGGCAAGCAGTCAGGGGTTAGCCATGCCTTCGAAGGCCTCCTCCTaGCTCTTCCCCTTGAATCTC +
Preference number: 5 (lower is better)
Translates to: WPEQQLKYEASSQGLAMPSKASS*LFPLNL
Trigger: GAGATTCAAGGGGAAGAGCAAGGAGGAGGCCTTCGA...AGGCATGGCTAACCCCTGACTGCTTGCCTCATATTTAAGCTGCTGCTCTGGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290942.9
ENST00000393957.7
ENST00000562206.1
ENST00000564104.5
CDS TCA 90 bp TGGAGGGCAATAGATATAAGGTTTGCCCTGGAAGAACGACCTTCGTaGTCATGGTGTTTCCCTGACCCCTTCTTGATGTCCTCCCTGGTT +
Preference number: 5 (lower is better)
Translates to: WRAIDIRFALEERPS*SWCFPDPFLMSSLV
Trigger: AACCAGGGAGGACATCAAGAAGGGGTCAGGGAAACACCATGATCACGAAGGTCGTTCTTCCAGGGCAAACCTTATATCTATTGCCCTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561537.1
CDS-3UTR CAA 90 bp CAGCTTAAATATGAGGCAAGCAGTCAGGGGTTAGCCATGCCTGGGGCTGGGTTGTGGTCCAGCAAGGCCTaGTTACTATTTGCTGTTAAA +
Preference number: 5 (lower is better)
Translates to: QLKYEASSQGLAMPGAGLWSSKA*LLFAVK
Trigger: TTTAACAGCAAATAGTAACAAGGCCTTGCTGGACCA...CAACCCAGCCCCAGGCATGGCTAACCCCTGACTGCTTGCCTCATATTTAAGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564104.5
CDS CCA 90 bp TTTGCTGCCACCACAAATTATGCAATTGCGTTTCTTTCCCACGTTTaGGGAAGTCGCAGGGGTCAGCAACTCTGGAGGGCAATAGATATA +
Preference number: 5 (lower is better)
Translates to: FAATTNYAIAFLSHV*GSRRGQQLWRAIDI
Trigger: TATATCTATTGCCCTCCAGAGTTGCTGACCCCTGCGACTTCCCCAAACGTGGGAAAGAAACGCAATTGCATAATTTGTGGTGGCAGCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561537.1
CDS GCA 72 bp ACGCGGGAGACCAGGCGGCTCCGCAGCTCCGCTCCCTaGCGGCTCCCGGGTGGGACTGCAGCCCAGGCGGCT +
Preference number: 6 (lower is better)
Translates to: TRETRRLRSSAP*RLPGGTAAQAA
Trigger: AGCCGCCTGGGCTGCAGTCCCACCCGGGAGCCGGCAGGGAGCGGAGCTGCGGAGCCGCCTGGTCTCCCGCGT
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290942.9
CDS CCA 72 bp GGGGCCAGGGCAGGGCCGCTCAGCTGGCTCCTCGGCTaGGACCGCCGGAGGTTGGGACCCTTTCCAGGCTGC +
Preference number: 6 (lower is better)
Translates to: GARAGPLSWLLG*DRRRLGPFPGC
Trigger: GCAGCCTGGAAAGGGTCCCAACCTCCGGCGGTCCCAGCCGAGGAGCCAGCTGAGCGGCCCTGCCCTGGCCCC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562206.1
CDS CCA 72 bp GGTGGAATGCTTGGGGCCAGGGCAGGGCCGCTCAGCTaGCTCCTCGGCTGGGACCGCCGGAGGTTGGGACCC +
Preference number: 6 (lower is better)
Translates to: GGMLGARAGPLS*LLGWDRRRLGP
Trigger: GGGTCCCAACCTCCGGCGGTCCCAGCCGAGGAGCCAGCTGAGCGGCCCTGCCCTGGCCCCAAGCATTCCACC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562206.1
CDS CCA 72 bp CGGTCAGGTGGCGCTGGGTTGCAGGCCGCAGCCCCATaGGTCTGCAGGCCATGGATGGAGTGGCCACACCCG +
Preference number: 6 (lower is better)
Translates to: RSGGAGLQAAAP*VCRPWMEWPHP
Trigger: CGGGTGTGGCCACTCCATCCATGGCCTGCAGACCCATGGGGCTGCGGCCTGCAACCCAGCGCCACCTGACCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562206.1
CDS CCA 72 bp AGAGCAGGCCCCCTCCCTGGAAGCTCCATGCCAAGCTaGCTTGGGGCCAGGCCAGGCTGCTGGTCGGGCAGG +
Preference number: 6 (lower is better)
Translates to: RAGPLPGSSMPS*LGARPGCWSGR
Trigger: CCTGCCCGACCAGCAGCCTGGCCTGGCCCCAAGCCAGCTTGGCATGGAGCTTCCAGGGAGGGGGCCTGCTCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000564104.5
CDS CCA 72 bp AGGCCCCCTCCCTGGAAGCTCCATGCCAAGCTGGCTTaGGGCCAGGCCAGGCTGCTGGTCGGGCAGGCATTC +
Preference number: 6 (lower is better)
Translates to: RPPPWKLHAKLA*GQARLLVGQAF
Trigger: GAATGCCTGCCCGACCAGCAGCCTGGCCTGGCCCCAAGCCAGCTTGGCATGGAGCTTCCAGGGAGGGGGCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564104.5
CDS CCA 72 bp CTGCAGGCCATGGATGGAGTGGCCACACCCGTGAACTaGAGCCACCCGTCCCGCTCCCACTGGGACAGCTGG +
Preference number: 6 (lower is better)
Translates to: LQAMDGVATPVN*SHPSRSHWDSW
Trigger: CCAGCTGTCCCAGTGGGAGCGGGACGGGTGGCTCCAGTTCACGGGTGTGGCCACTCCATCCATGGCCTGCAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562206.1
CDS CCA 72 bp TGCAGGCCGCAGCCCCATGGGTCTGCAGGCCATGGATaGAGTGGCCACACCCGTGAACTGGAGCCACCCGTC +
Preference number: 6 (lower is better)
Translates to: CRPQPHGSAGHG*SGHTRELEPPV
Trigger: GACGGGTGGCTCCAGTTCACGGGTGTGGCCACTCCATCCATGGCCTGCAGACCCATGGGGCTGCGGCCTGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562206.1
CDS TCA 72 bp GTCTGGCCCTGGCACAAGGCCTTGCTTGGGTGGAAGTaGGGGTGGCAGAGCAGGCCCCCTCCCTGGAAGCTC +
Preference number: 6 (lower is better)
Translates to: VWPWHKALLGWK*GWQSRPPPWKL
Trigger: GAGCTTCCAGGGAGGGGGCCTGCTCTGCCACCCTCACTTCCACCCAAGCAAGGCCTTGTGCCAGGGCCAGAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000564104.5
CDS CCA 72 bp CGTTCGGAAGGACAGAACGACGCAGGAATGGACCGATaGACGCGGGAGACCAGGCGGCTCCGCAGCTCCGCT +
Preference number: 6 (lower is better)
Translates to: RSEGQNDAGMDR*TRETRRLRSSA
Trigger: AGCGGAGCTGCGGAGCCGCCTGGTCTCCCGCGTCCATCGGTCCATTCCTGCGTCGTTCTGTCCTTCCGAACG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290942.9
ENST00000393957.7
ENST00000561537.1
ENST00000562206.1
CDS CCA 72 bp GGAGCTTGGATGCCACAGGGTGCTTGGCCCAAGCACTaGGCGGATCCTGCGTGCAGTGCTCACTCCTCGCGG +
Preference number: 6 (lower is better)
Translates to: GAWMPQGAWPKH*ADPACSAHSSR
Trigger: CCGCGAGGAGTGAGCACTGCACGCAGGATCCGCCCAGTGCTTGGGCCAAGCACCCTGTGGCATCCAAGCTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290942.9
CDS CCA 72 bp TGGATTCTTGGTCATCTCAGCGCGGTCAGGTGGCGCTaGGTTGCAGGCCGCAGCCCCATGGGTCTGCAGGCC +
Preference number: 6 (lower is better)
Translates to: WILGHLSAVRWR*VAGRSPMGLQA
Trigger: GGCCTGCAGACCCATGGGGCTGCGGCCTGCAACCCAGCGCCACCTGACCGCGCTGAGATGACCAAGAATCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562206.1
CDS CCA 72 bp CCCAGCAAGAGCCAGTCTGGGCACGGGTGCATGCCCTaGGCAGGGGTGCAGCTGGTCCAGCAAGGCCTTGTT +
Preference number: 6 (lower is better)
Translates to: PSKSQSGHGCMP*AGVQLVQQGLV
Trigger: AACAAGGCCTTGCTGGACCAGCTGCACCCCTGCCCAGGGCATGCACCCGTGCCCAGACTGGCTCTTGCTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564104.5
CDS CCA 72 bp CCCTGGCTTTGTCTGGCCCTGGCACAAGGCCTTGCTTaGGTGGAAGTGAGGGTGGCAGAGCAGGCCCCCTCC +
Preference number: 6 (lower is better)
Translates to: PWLCLALAQGLA*VEVRVAEQAPS
Trigger: GGAGGGGGCCTGCTCTGCCACCCTCACTTCCACCCAAGCAAGGCCTTGTGCCAGGGCCAGACAAAGCCAGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564104.5
CDS CAA 72 bp TTCTTGGTCATCTCAGCGCGGTCAGGTGGCGCTGGGTaGCAGGCCGCAGCCCCATGGGTCTGCAGGCCATGG +
Preference number: 6 (lower is better)
Translates to: FLVISARSGGAG*QAAAPWVCRPW
Trigger: CCATGGCCTGCAGACCCATGGGGCTGCGGCCTGCAACCCAGCGCCACCTGACCGCGCTGAGATGACCAAGAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562206.1
CDS GCA 72 bp CAGGGTGCTTGGCCCAAGCACTGGGCGGATCCTGCGTaGAGTGCTCACTCCTCGCGGCTGCTCCTGAAGTGT +
Preference number: 6 (lower is better)
Translates to: QGAWPKHWADPA*SAHSSRLLLKC
Trigger: ACACTTCAGGAGCAGCCGCGAGGAGTGAGCACTGCACGCAGGATCCGCCCAGTGCTTGGGCCAAGCACCCTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290942.9
CDS CCA 72 bp GGAGCTTGGATGCCACAGGGTGCTTGGCCCAAGCACTaGGCGGATCCTGCGTGCAGTGCTCACTCCTGTCCG +
Preference number: 6 (lower is better)
Translates to: GAWMPQGAWPKH*ADPACSAHSCP
Trigger: CGGACAGGAGTGAGCACTGCACGCAGGATCCGCCCAGTGCTTGGGCCAAGCACCCTGTGGCATCCAAGCTCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562206.1
CDS CCA 72 bp GCAAGACCTGGGCAGGTTCTGCTACAGAGTTGGTGCTaGAGCTGCCTGGGGAGAGGGGCCCGTCACTGTCGC +
Preference number: 6 (lower is better)
Translates to: ARPGQVLLQSWC*SCLGRGARHCR
Trigger: GCGACAGTGACGGGCCCCTCTCCCCAGGCAGCTCCAGCACCAACTCTGTAGCAGAACCTGCCCAGGTCTTGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564104.5
CDS TCA 72 bp CTGTGCTCGCTGCCATGCCACCCTCGCGGCTGCTCCTaGAGTGTGCGTTCGGAAGGACAGAACGACGCAGGA +
Preference number: 6 (lower is better)
Translates to: LCSLPCHPRGCS*SVRSEGQNDAG
Trigger: TCCTGCGTCGTTCTGTCCTTCCGAACGCACACTTCAGGAGCAGCCGCGAGGGTGGCATGGCAGCGAGCACAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393957.7
ENST00000561537.1
CDS GCA 72 bp CGCTGCCATGCCACCCTCGCGGCTGCTCCTGAAGTGTaGGTTCGGAAGGACAGAACGACGCAGGAATGGACC +
Preference number: 6 (lower is better)
Translates to: RCHATLAAAPEV*VRKDRTTQEWT
Trigger: GGTCCATTCCTGCGTCGTTCTGTCCTTCCGAACGCACACTTCAGGAGCAGCCGCGAGGGTGGCATGGCAGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393957.7
ENST00000561537.1
CDS CCA 72 bp GAAGTGTGCGTTCGGAAGGACAGAACGACGCAGGAATaGACCGATGGACGCGGGAGACCAGGCGGCTCCGCA +
Preference number: 6 (lower is better)
Translates to: EVCVRKDRTTQE*TDGRGRPGGSA
Trigger: TGCGGAGCCGCCTGGTCTCCCGCGTCCATCGGTCCATTCCTGCGTCGTTCTGTCCTTCCGAACGCACACTTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290942.9
ENST00000393957.7
ENST00000561537.1
ENST00000562206.1
CDS CAA 90 bp GCTGCCATGCCACCTTGGTTCACCAAGGGTAACGTCCAGGGGAGCTaGGATGCCACAGGGTGCTTGGCCCAAGCACTGGGCGGATCCTGC +
Preference number: 6 (lower is better)
Translates to: AAMPPWFTKGNVQGS*DATGCLAQALGGSC
Trigger: GCAGGATCCGCCCAGTGCTTGGGCCAAGCACCCTGTGGCATCCAAGCTCCCCTGGACGTTACCCTTGGTGAACCAAGGTGGCATGGCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290942.9
ENST00000562206.1
CDS CAA 90 bp AAAGATGGATTCTTGGTCATCTCAGCGCGGTCAGGTGGCGCTGGGTaGCAGGCCGCAGCCCCATGGGTCTGCAGGCCATGGATGGAGTGG +
Preference number: 6 (lower is better)
Translates to: KDGFLVISARSGGAG*QAAAPWVCRPWMEW
Trigger: CCACTCCATCCATGGCCTGCAGACCCATGGGGCTGCGGCCTGCAACCCAGCGCCACCTGACCGCGCTGAGATGACCAAGAATCCATCTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562206.1
CDS TCA 72 bp GGGCCAGGCCAGGCTGCTGGTCGGGCAGGCATTCAGTaGGGACAGCATCTCTGTAAGGGTCATGAGGACCCA +
Preference number: 6 (lower is better)
Translates to: GPGQAAGRAGIQ*GQHLCKGHEDP
Trigger: TGGGTCCTCATGACCCTTACAGAGATGCTGTCCTCACTGAATGCCTGCCCGACCAGCAGCCTGGCCTGGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564104.5
CDS CCA 72 bp CACCTTGGTTCACCAAGGGTAACGTCCAGGGGAGCTTaGATGCCACAGGGTGCTTGGCCCAAGCACTGGGCG +
Preference number: 6 (lower is better)
Translates to: HLGSPRVTSRGA*MPQGAWPKHWA
Trigger: CGCCCAGTGCTTGGGCCAAGCACCCTGTGGCATCCAAGCTCCCCTGGACGTTACCCTTGGTGAACCAAGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290942.9
ENST00000562206.1
CDS CAA 72 bp CCACCTTGGTTCACCAAGGGTAACGTCCAGGGGAGCTaGGATGCCACAGGGTGCTTGGCCCAAGCACTGGGC +
Preference number: 6 (lower is better)
Translates to: PPWFTKGNVQGS*DATGCLAQALG
Trigger: GCCCAGTGCTTGGGCCAAGCACCCTGTGGCATCCAAGCTCCCCTGGACGTTACCCTTGGTGAACCAAGGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290942.9
ENST00000562206.1
CDS CAA 72 bp ACAGAGCCCCAAGGAAGAGCCCCGGGAGGCACGGTCTaGTCACTAATGCCAGCCCTGGCTCTCAGCAGGGTT +
Preference number: 6 (lower is better)
Translates to: TEPQGRAPGGTV*SLMPALALSRV
Trigger: AACCCTGCTGAGAGCCAGGGCTGGCATTAGTGACAAGACCGTGCCTCCCGGGGCTCTTCCTTGGGGCTCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564104.5
CDS CAA 90 bp GATCCTGCGTGCAGTGCTCACTCCTGTCCGTGGAAAGATGGATTCTaGGTCATCTCAGCGCGGTCAGGTGGCGCTGGGTTGCAGGCCGCA +
Preference number: 6 (lower is better)
Translates to: DPACSAHSCPWKDGF*VISARSGGAGLQAA
Trigger: TGCGGCCTGCAACCCAGCGCCACCTGACCGCGCTGAGATGACCAAGAATCCATCTTTCCACGGACAGGAGTGAGCACTGCACGCAGGATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562206.1
CDS GCA 72 bp GTGCAGTGCTCACTCCTCGCGGCTGCTCCTGAAGTGTaGGTTCGGAAGGACAGAACGACGCAGGAATGGACC +
Preference number: 6 (lower is better)
Translates to: VQCSLLAAAPEV*VRKDRTTQEWT
Trigger: GGTCCATTCCTGCGTCGTTCTGTCCTTCCGAACGCACACTTCAGGAGCAGCCGCGAGGAGTGAGCACTGCAC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290942.9
CDS GCA 72 bp CAGGGTGCTTGGCCCAAGCACTGGGCGGATCCTGCGTaGAGTGCTCACTCCTGTCCGTGGAAAGATGGATTC +
Preference number: 6 (lower is better)
Translates to: QGAWPKHWADPA*SAHSCPWKDGF
Trigger: GAATCCATCTTTCCACGGACAGGAGTGAGCACTGCACGCAGGATCCGCCCAGTGCTTGGGCCAAGCACCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562206.1
CDS GCA 72 bp TCTCCTCCAGCCCAGCCATGTCTGTGCTCGCTGCCATaGCACCCTATAGAGACCCACCTGGGTCATCTCCCA +
Preference number: 6 (lower is better)
Translates to: SPPAQPCLCSLP*HPIETHLGHLP
Trigger: TGGGAGATGACCCAGGTGGGTCTCTATAGGGTGGCATGGCAGCGAGCACAGACATGGCTGGGCTGGAGGAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564104.5
CDS CCA 72 bp GATACTGATTGGGGTGGCGGGCATCTGGGTCTCCTATaGGCTTCTACCTCGCGGCTGCTCCTGAAGTGTGCG +
Preference number: 6 (lower is better)
Translates to: DTDWGGGHLGLL*ASTSRLLLKCA
Trigger: CGCACACTTCAGGAGCAGCCGCGAGGTAGAAGCCCATAGGAGACCCAGATGCCCGCCACCCCAATCAGTATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562206.1
CDS CCA 72 bp TCATCGTGCAGGATACTGATTGGGGTGGCGGGCATCTaGGTCTCCTATGGGCTTCTACCTCGCGGCTGCTCC +
Preference number: 6 (lower is better)
Translates to: SSCRILIGVAGI*VSYGLLPRGCS
Trigger: GGAGCAGCCGCGAGGTAGAAGCCCATAGGAGACCCAGATGCCCGCCACCCCAATCAGTATCCTGCACGATGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562206.1
CDS CAA 90 bp TTCATCTCTTGCCCACTGGCCTTGGGGTCACCATGGATGGCAAACTaGCGGAAGCTCTCCTCCAGCCCAGCCATGTCTGTGCTCGCTGCC +
Preference number: 6 (lower is better)
Translates to: FISCPLALGSPWMAN*RKLSSSPAMSVLAA
Trigger: GGCAGCGAGCACAGACATGGCTGGGCTGGAGGAGAGCTTCCGCAAGTTTGCCATCCATGGTGACCCCAAGGCCAGTGGGCAAGAGATGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290942.9
ENST00000393957.7
ENST00000561537.1
ENST00000562206.1
ENST00000564104.5
CDS TCA 72 bp TGGGTCTCCTATGGGCTTCTACCTCGCGGCTGCTCCTaGAGTGTGCGTTCGGAAGGACAGAACGACGCAGGA +
Preference number: 6 (lower is better)
Translates to: WVSYGLLPRGCS*SVRSEGQNDAG
Trigger: TCCTGCGTCGTTCTGTCCTTCCGAACGCACACTTCAGGAGCAGCCGCGAGGTAGAAGCCCATAGGAGACCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562206.1
CDS GCA 72 bp CCTATGGGCTTCTACCTCGCGGCTGCTCCTGAAGTGTaGGTTCGGAAGGACAGAACGACGCAGGAATGGACC +
Preference number: 6 (lower is better)
Translates to: PMGFYLAAAPEV*VRKDRTTQEWT
Trigger: GGTCCATTCCTGCGTCGTTCTGTCCTTCCGAACGCACACTTCAGGAGCAGCCGCGAGGTAGAAGCCCATAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562206.1
CDS GCA 72 bp GCCTCTACCTCAAACCTGCAAGACCTGGGCAGGTTCTaGTACAGAGTTGGTGCTGGAGCTGCCTGGGGAGAG +
Preference number: 6 (lower is better)
Translates to: ASTSNLQDLGRF*YRVGAGAAWGE
Trigger: CTCTCCCCAGGCAGCTCCAGCACCAACTCTGTAGCAGAACCTGCCCAGGTCTTGCAGGTTTGAGGTAGAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564104.5
CDS CCA 72 bp GCAGTGCTCACTCCTGTCCGTGGAAAGATGGATTCTTaGTCATCTCAGCGCGGTCAGGTGGCGCTGGGTTGC +
Preference number: 6 (lower is better)
Translates to: AVLTPVRGKMDS*SSQRGQVALGC
Trigger: GCAACCCAGCGCCACCTGACCGCGCTGAGATGACCAAGAATCCATCTTTCCACGGACAGGAGTGAGCACTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562206.1
CDS CCA 72 bp TCCTGCGTGCAGTGCTCACTCCTGTCCGTGGAAAGATaGATTCTTGGTCATCTCAGCGCGGTCAGGTGGCGC +
Preference number: 6 (lower is better)
Translates to: SCVQCSLLSVER*ILGHLSAVRWR
Trigger: GCGCCACCTGACCGCGCTGAGATGACCAAGAATCCATCTTTCCACGGACAGGAGTGAGCACTGCACGCAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562206.1
CDS CAA 90 bp GCACCCCCTGTTTTTGCTTTAGTGACGCCCACATTGGCTGGCTCTTaGCCTGCCACCAGCTGGCAGATGGCATCGAAGGCCTCCTCCTTG +
Preference number: 6 (lower is better)
Translates to: APPVFALVTPTLAGS*PATSWQMASKASSL
Trigger: CAAGGAGGAGGCCTTCGATGCCATCTGCCAGCTGGTGGCAGGCAAAGAGCCAGCCAATGTGGGCGTCACTAAAGCAAAAACAGGGGGTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000290942.9
ENST00000393957.7
ENST00000562206.1
ENST00000564104.5
CDS CAA 90 bp GAGCTTGGGGCTGGCCTGGCCACAGTTTGTGAAGCCTGGAGACGGTaGCTAAGGGAGGGTGGTGCTGCTTGGAGAATGTTGCTAAGGGCA +
Preference number: 6 (lower is better)
Translates to: ELGAGLATVCEAWRR*LREGGAAWRMLLRA
Trigger: TGCCCTTAGCAACATTCTCCAAGCAGCACCACCCTCCCTTAGCAACCGTCTCCAGGCTTCACAAACTGTGGCCAGGCCAGCCCCAAGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564104.5
CDS GCA 72 bp TGCTTGGCCCAAGCACTGGGCGGATCCTGCGTGCAGTaGTCACTCCTGTCCGTGGAAAGATGGATTCTTGGT +
Preference number: 6 (lower is better)
Translates to: CLAQALGGSCVQ*SLLSVERWILG
Trigger: ACCAAGAATCCATCTTTCCACGGACAGGAGTGAGCACTGCACGCAGGATCCGCCCAGTGCTTGGGCCAAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562206.1
CDS CCA 72 bp CCATTCATCTCTTGCCCACTGGCCTTGGGGTCACCATaGATGGCAAACTTGCGGAAGCTCTCCTCCAGCCCA +
Preference number: 6 (lower is better)
Translates to: PFISCPLALGSP*MANLRKLSSSP
Trigger: TGGGCTGGAGGAGAGCTTCCGCAAGTTTGCCATCCATGGTGACCCCAAGGCCAGTGGGCAAGAGATGAATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290942.9
ENST00000393957.7
ENST00000561537.1
ENST00000562206.1
ENST00000564104.5
CDS CCA 72 bp TGGGCGGATCCTGCGTGCAGTGCTCACTCCTGTCCGTaGAAAGATGGATTCTTGGTCATCTCAGCGCGGTCA +
Preference number: 6 (lower is better)
Translates to: WADPACSAHSCP*KDGFLVISARS
Trigger: TGACCGCGCTGAGATGACCAAGAATCCATCTTTCCACGGACAGGAGTGAGCACTGCACGCAGGATCCGCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562206.1
CDS CAA 72 bp CAGATGGCATCGAAGGCCTCCTCCTTGCTCTTCCCCTaGAATCTCTTGGTCGCCAGCTCTTCCAGGGCCTTC +
Preference number: 6 (lower is better)
Translates to: QMASKASSLLFP*NLLVASSSRAF
Trigger: GAAGGCCCTGGAAGAGCTGGCGACCAAGAGATTCAAGGGGAAGAGCAAGGAGGAGGCCTTCGATGCCATCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290942.9
ENST00000393957.7
ENST00000561537.1
ENST00000562206.1
ENST00000564104.5
CDS CAA 72 bp TGCAGTGCTCACTCCTGTCCGTGGAAAGATGGATTCTaGGTCATCTCAGCGCGGTCAGGTGGCGCTGGGTTG +
Preference number: 6 (lower is better)
Translates to: CSAHSCPWKDGF*VISARSGGAGL
Trigger: CAACCCAGCGCCACCTGACCGCGCTGAGATGACCAAGAATCCATCTTTCCACGGACAGGAGTGAGCACTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562206.1
CDS CAA 72 bp GCTGGCCTGGCCACAGTTTGTGAAGCCTGGAGACGGTaGCTAAGGGAGGGTGGTGCTGCTTGGAGAATGTTG +
Preference number: 6 (lower is better)
Translates to: AGLATVCEAWRR*LREGGAAWRML
Trigger: CAACATTCTCCAAGCAGCACCACCCTCCCTTAGCAACCGTCTCCAGGCTTCACAAACTGTGGCCAGGCCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564104.5
CDS TCA 72 bp CCTGGAAGAACGACCTTCGTGATCATGGTGTTTCCCTaGCCCCTTCTTGATGTCCTCCCTGGTTCCAGCCCC +
Preference number: 6 (lower is better)
Translates to: PGRTTFVIMVFP*PLLDVLPGSSP
Trigger: GGGGCTGGAACCAGGGAGGACATCAAGAAGGGGTCAGGGAAACACCATGATCACGAAGGTCGTTCTTCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561537.1
CDS GCA 72 bp CCCAAGCCCAGAACATCCCAGCCTCTACCTCAAACCTaGAAGACCTGGGCAGGTTCTGCTACAGAGTTGGTG +
Preference number: 6 (lower is better)
Translates to: PKPRTSQPLPQT*KTWAGSATELV
Trigger: CACCAACTCTGTAGCAGAACCTGCCCAGGTCTTGCAGGTTTGAGGTAGAGGCTGGGATGTTCTGGGCTTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564104.5
CDS CCA 72 bp ACCCCCTGTTTTTGCTTTAGTGACGCCCACATTGGCTaGCTCTTTGCCTGCCACCAGCTGGCAGATGGCATC +
Preference number: 6 (lower is better)
Translates to: TPCFCFSDAHIG*LFACHQLADGI
Trigger: GATGCCATCTGCCAGCTGGTGGCAGGCAAAGAGCCAGCCAATGTGGGCGTCACTAAAGCAAAAACAGGGGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000290942.9
ENST00000393957.7
ENST00000562206.1
ENST00000564104.5
CDS CAA 72 bp ACAGCACCCCCTGTTTTTGCTTTAGTGACGCCCACATaGGCTGGCTCTTTGCCTGCCACCAGCTGGCAGATG +
Preference number: 6 (lower is better)
Translates to: TAPPVFALVTPT*AGSLPATSWQM
Trigger: CATCTGCCAGCTGGTGGCAGGCAAAGAGCCAGCCAATGTGGGCGTCACTAAAGCAAAAACAGGGGGTGCTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000290942.9
ENST00000393957.7
ENST00000562206.1
ENST00000564104.5
CDS TCA 72 bp GGGAACATGAGAAGCAGGGGCTGCTTAGGGCTCACTTaGCTTTGGAGAAGACGATGTCCACATCGGTCCCTG +
Preference number: 6 (lower is better)
Translates to: GNMRSRGCLGLT*LWRRRCPHRSL
Trigger: CAGGGACCGATGTGGACATCGTCTTCTCCAAAGTCAAGTGAGCCCTAAGCAGCCCCTGCTTCTCATGTTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561537.1
CDS GCA 72 bp CAAGCCTCACTTCTTCACCTTGGCATCGTAGGTGCCTaGATTCTTGTAGGCGCTCACGTAGCCACTGTCGTC +
Preference number: 6 (lower is better)
Translates to: QASLLHLGIVGA*ILVGAHVATVV
Trigger: GACGACAGTGGCTACGTGAGCGCCTACAAGAATGCAGGCACCTACGATGCCAAGGTGAAGAAGTGAGGCTTG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290942.9
ENST00000393957.7
ENST00000562206.1
ENST00000564104.5
CDS CCA 72 bp AGAACATCCCAGCCTCTACCTCAAACCTGCAAGACCTaGGCAGGTTCTGCTACAGAGTTGGTGCTGGAGCTG +
Preference number: 6 (lower is better)
Translates to: RTSQPLPQTCKT*AGSATELVLEL
Trigger: CAGCTCCAGCACCAACTCTGTAGCAGAACCTGCCCAGGTCTTGCAGGTTTGAGGTAGAGGCTGGGATGTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564104.5
CDS GCA 72 bp TTCCCAAGCCTCACTTCTTCACCTTGGCATCGTAGGTaGCTGCATTCTTGTAGGCGCTCACGTAGCCACTGT +
Preference number: 6 (lower is better)
Translates to: FPSLTSSPWHRR*LHSCRRSRSHC
Trigger: ACAGTGGCTACGTGAGCGCCTACAAGAATGCAGGCACCTACGATGCCAAGGTGAAGAAGTGAGGCTTGGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290942.9
ENST00000393957.7
ENST00000562206.1
ENST00000564104.5
CDS CAA 72 bp TGCCCTGGGCAGGGGTGCAGCTGGTCCAGCAAGGCCTaGTTACTATTTGCTGTTAAACAAAAACATGAGGGG +
Preference number: 6 (lower is better)
Translates to: CPGQGCSWSSKA*LLFAVKQKHEG
Trigger: CCCCTCATGTTTTTGTTTAACAGCAAATAGTAACAAGGCCTTGCTGGACCAGCTGCACCCCTGCCCAGGGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000564104.5
CDS CAA 72 bp CACCACAAATTATGCAATTGCGTTTCTTTCCCACGTTaGGGGAAGTCGCAGGGGTCAGCAACTCTGGAGGGC +
Preference number: 6 (lower is better)
Translates to: HHKLCNCVSFPR*GKSQGSATLEG
Trigger: GCCCTCCAGAGTTGCTGACCCCTGCGACTTCCCCAAACGTGGGAAAGAAACGCAATTGCATAATTTGTGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561537.1
CDS CCA 72 bp ACCACAAATTATGCAATTGCGTTTCTTTCCCACGTTTaGGGAAGTCGCAGGGGTCAGCAACTCTGGAGGGCA +
Preference number: 6 (lower is better)
Translates to: TTNYAIAFLSHV*GSRRGQQLWRA
Trigger: TGCCCTCCAGAGTTGCTGACCCCTGCGACTTCCCCAAACGTGGGAAAGAAACGCAATTGCATAATTTGTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561537.1
CDS GCA 72 bp CTCAAACACATTTGCTGCCACCACAAATTATGCAATTaGGTTTCTTTCCCACGTTTGGGGAAGTCGCAGGGG +
Preference number: 6 (lower is better)
Translates to: LKHICCHHKLCN*VSFPRLGKSQG
Trigger: CCCCTGCGACTTCCCCAAACGTGGGAAAGAAACGCAATTGCATAATTTGTGGTGGCAGCAAATGTGTTTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561537.1
CDS CAA 72 bp GCTCAAACACATTTGCTGCCACCACAAATTATGCAATaGCGTTTCTTTCCCACGTTTGGGGAAGTCGCAGGG +
Preference number: 6 (lower is better)
Translates to: AQTHLLPPQIMQ*RFFPTFGEVAG
Trigger: CCCTGCGACTTCCCCAAACGTGGGAAAGAAACGCAATTGCATAATTTGTGGTGGCAGCAAATGTGTTTGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561537.1
CDS TCA 72 bp ATAGATATAAGGTTTGCCCTGGAAGAACGACCTTCGTaGTCATGGTGTTTCCCTGACCCCTTCTTGATGTCC +
Preference number: 6 (lower is better)
Translates to: IDIRFALEERPS*SWCFPDPFLMS
Trigger: GGACATCAAGAAGGGGTCAGGGAAACACCATGATCACGAAGGTCGTTCTTCCAGGGCAAACCTTATATCTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561537.1
CDS GCA 72 bp GGAAAGCTCAAACACATTTGCTGCCACCACAAATTATaGAATTGCGTTTCTTTCCCACGTTTGGGGAAGTCG +
Preference number: 6 (lower is better)
Translates to: GKLKHICCHHKL*NCVSFPRLGKS
Trigger: CGACTTCCCCAAACGTGGGAAAGAAACGCAATTGCATAATTTGTGGTGGCAGCAAATGTGTTTGAGCTTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561537.1