RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TPPP (Homo sapiens)

Ensembl gene IDs: ENSG00000171368

Ensembl transcript IDs: ENST00000360578.7

Found 431 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TGGCCGTGTGGGCGAGGTGACCCGTCGGTGACAGGGCCTGCTCCCTaGGAGGTCGGGTGGTGCCCGGGCCGGGCGGAGGCTCTTCTCGTG +
Preference number: 1 (lower is better)
Translates to: WPCGRGDPSVTGPAP*EVGWCPGRAEALLV
Trigger: CACGAGAAGAGCCTCCGCCCGGCCCGGGCACCACCCGACCTCGCAGGGAGCAGGCCCTGTCACCGACGGGTCACCTCGCCCACACGGCCA
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360578.7
3UTR GCA 90 bp TCCCCACAGACCGGATCAGGGCCTGGCGAGCCTCTGTGCCTGCCGTaGGGTGTGAGGACCCGCGGACCCCAACCCGCCCTTCCCTCCGTC +
Preference number: 1 (lower is better)
Translates to: SPQTGSGPGEPLCLP*GVRTRGPQPALPSV
Trigger: GACGGAGGGAAGGGCGGGTTGGGGTCCGCGGGTCCTCACACCGCACGGCAGGCACAGAGGCTCGCCAGGCCCTGATCCGGTCTGTGGGGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360578.7
3UTR GCA 90 bp TGTCCCTCGTCCCCACAGACCGGATCAGGGCCTGGCGAGCCTCTGTaGCTGCCGTGCGGTGTGAGGACCCGCGGACCCCAACCCGCCCTT +
Preference number: 1 (lower is better)
Translates to: CPSSPQTGSGPGEPL*LPCGVRTRGPQPAL
Trigger: AAGGGCGGGTTGGGGTCCGCGGGTCCTCACACCGCACGGCAGGCACAGAGGCTCGCCAGGCCCTGATCCGGTCTGTGGGGACGAGGGACA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360578.7
3UTR CCA 90 bp CGGCCACTCCAGCCAGGTCTGGGAAGGGCTGTGGTGAGTCGGTGCTaGCCGTGTGGGCGAGGTGACCCGTCGGTGACAGGGCCTGCTCCC +
Preference number: 1 (lower is better)
Translates to: RPLQPGLGRAVVSRC*PCGRGDPSVTGPAP
Trigger: GGGAGCAGGCCCTGTCACCGACGGGTCACCTCGCCCACACGGCCAGCACCGACTCACCACAGCCCTTCCCAGACCTGGCTGGAGTGGCCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360578.7
3UTR TCA 90 bp GTGGGGACTGGGCTGCCCACGGACAGAAAGGAGAAACGCAGCCTGTaGCCAGGAGACGCAGCCCAGGGTGGAGCCGCGCTGGGGCCAGGG +
Preference number: 1 (lower is better)
Translates to: VGTGLPTDRKEKRSL*PGDAAQGGAALGPG
Trigger: CCCTGGCCCCAGCGCGGCTCCACCCTGGGCTGCGTCTCCTGGTCACAGGCTGCGTTTCTCCTTTCTGTCCGTGGGCAGCCCAGTCCCCAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360578.7
3UTR GCA 90 bp CCTGCGAGGTCGGGTGGTGCCCGGGCCGGGCGGAGGCTCTTCTCGTaGTCAGGGCCGGTTTCTGGTGTGCTCCCGATGCGCTTGGCTCTT +
Preference number: 1 (lower is better)
Translates to: PARSGGARAGRRLFS*SGPVSGVLPMRLAL
Trigger: AAGAGCCAAGCGCATCGGGAGCACACCAGAAACCGGCCCTGAGCACGAGAAGAGCCTCCGCCCGGCCCGGGCACCACCCGACCTCGCAGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360578.7
3UTR GCA 90 bp CTCCGGCCACTCCAGCCAGGTCTGGGAAGGGCTGTGGTGAGTCGGTaGTGGCCGTGTGGGCGAGGTGACCCGTCGGTGACAGGGCCTGCT +
Preference number: 1 (lower is better)
Translates to: LRPLQPGLGRAVVSR*WPCGRGDPSVTGPA
Trigger: AGCAGGCCCTGTCACCGACGGGTCACCTCGCCCACACGGCCAGCACCGACTCACCACAGCCCTTCCCAGACCTGGCTGGAGTGGCCGGAG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360578.7
3UTR CCA 90 bp AGCTGTGGCCGCAGCAGGTGCACTCTTGGGAGTCGGGGAGGCGGGTaGTGCTCATGCGTGCCAGTGAGGGAGGGGCCTCGCCACCCTCCT +
Preference number: 1 (lower is better)
Translates to: SCGRSRCTLGSRGGG*CSCVPVREGPRHPP
Trigger: AGGAGGGTGGCGAGGCCCCTCCCTCACTGGCACGCATGAGCACCACCCGCCTCCCCGACTCCCAAGAGTGCACCTGCTGCGGCCACAGCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360578.7
3UTR CCA 90 bp CACCTCTCCTCAGTGTCCCTCGTCCCCACAGACCGGATCAGGGCCTaGCGAGCCTCTGTGCCTGCCGTGCGGTGTGAGGACCCGCGGACC +
Preference number: 1 (lower is better)
Translates to: HLSSVSLVPTDRIRA*RASVPAVRCEDPRT
Trigger: GGTCCGCGGGTCCTCACACCGCACGGCAGGCACAGAGGCTCGCCAGGCCCTGATCCGGTCTGTGGGGACGAGGGACACTGAGGAGAGGTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360578.7
3UTR CCA 90 bp GATGCCCACGCAGGGCTGCTGTGGTCAGCCCTGAGCTGGCATCCCTaGGGCCCGGGATGGAGTGGCACCAACAGGCAAGTGGGGCGGCCA +
Preference number: 1 (lower is better)
Translates to: DAHAGLLWSALSWHP*GPGWSGTNRQVGRP
Trigger: TGGCCGCCCCACTTGCCTGTTGGTGCCACTCCATCCCGGGCCCCAGGGATGCCAGCTCAGGGCTGACCACAGCAGCCCTGCGTGGGCATC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360578.7
3UTR GCA 90 bp TGTGGCCGCAGCAGGTGCACTCTTGGGAGTCGGGGAGGCGGGTGGTaGTCATGCGTGCCAGTGAGGGAGGGGCCTCGCCACCCTCCTGTA +
Preference number: 1 (lower is better)
Translates to: CGRSRCTLGSRGGGW*SCVPVREGPRHPPV
Trigger: TACAGGAGGGTGGCGAGGCCCCTCCCTCACTGGCACGCATGAGCACCACCCGCCTCCCCGACTCCCAAGAGTGCACCTGCTGCGGCCACA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360578.7
3UTR CCA 90 bp CTCCCCAGGTGCAGACAGGCAAGGGCGGGCCGCCTGGGTGTGTCCTaGCAGTGTGGAGTGTCCTGGATGGGCTCTGCTCAGCCCCCTGCT +
Preference number: 1 (lower is better)
Translates to: LPRCRQARAGRLGVS*QCGVSWMGSAQPPA
Trigger: AGCAGGGGGCTGAGCAGAGCCCATCCAGGACACTCCACACTGCCAGGACACACCCAGGCGGCCCGCCCTTGCCTGTCTGCACCTGGGGAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360578.7
3UTR CCA 90 bp AGCGCCGGCTTCTCCCCAGGTGCAGACAGGCAAGGGCGGGCCGCCTaGGTGTGTCCTGGCAGTGTGGAGTGTCCTGGATGGGCTCTGCTC +
Preference number: 1 (lower is better)
Translates to: SAGFSPGADRQGRAA*VCPGSVECPGWALL
Trigger: GAGCAGAGCCCATCCAGGACACTCCACACTGCCAGGACACACCCAGGCGGCCCGCCCTTGCCTGTCTGCACCTGGGGAGAAGCCGGCGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360578.7
3UTR CCA 90 bp ACTCGTGGGCACCAACCCTGGAAGTGTGGAGGGAGAGTGGGGGCGTaGGGCCTCTCCCTCCAGGATCCCAGGGTGCTCCAGGCCAGGACG +
Preference number: 1 (lower is better)
Translates to: TRGHQPWKCGGRVGA*GLSLQDPRVLQART
Trigger: CGTCCTGGCCTGGAGCACCCTGGGATCCTGGAGGGAGAGGCCCCACGCCCCCACTCTCCCTCCACACTTCCAGGGTTGGTGCCCACGAGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000360578.7
3UTR TCA 90 bp GAGGACGGGCGAACGGGAGGGCCGGGCAGAGGCTCTGTCACGCGGTaGGGCGAGGAGTGTCTCGGCACTTCGTGTCTCTTGCCTGGCAAC +
Preference number: 1 (lower is better)
Translates to: EDGRTGGPGRGSVTR*GEECLGTSCLLPGN
Trigger: GTTGCCAGGCAAGAGACACGAAGTGCCGAGACACTCCTCGCCTCACCGCGTGACAGAGCCTCTGCCCGGCCCTCCCGTTCGCCCGTCCTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360578.7
3UTR CCA 90 bp GTGCAGACAGGCAAGGGCGGGCCGCCTGGGTGTGTCCTGGCAGTGTaGAGTGTCCTGGATGGGCTCTGCTCAGCCCCCTGCTGGCAGAGA +
Preference number: 1 (lower is better)
Translates to: VQTGKGGPPGCVLAV*SVLDGLCSAPCWQR
Trigger: TCTCTGCCAGCAGGGGGCTGAGCAGAGCCCATCCAGGACACTCCACACTGCCAGGACACACCCAGGCGGCCCGCCCTTGCCTGTCTGCAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000360578.7
3UTR CCA 90 bp AGGGGGAGTCCTTCCACGGAGCTGTGGCCGCAGCAGGTGCACTCTTaGGAGTCGGGGAGGCGGGTGGTGCTCATGCGTGCCAGTGAGGGA +
Preference number: 1 (lower is better)
Translates to: RGSPSTELWPQQVHS*ESGRRVVLMRASEG
Trigger: TCCCTCACTGGCACGCATGAGCACCACCCGCCTCCCCGACTCCCAAGAGTGCACCTGCTGCGGCCACAGCTCCGTGGAAGGACTCCCCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360578.7
3UTR CCA 90 bp GGGCTTCTGCTCTGCTCAGGTAGGGGGAGTCCTTCCACGGAGCTGTaGCCGCAGCAGGTGCACTCTTGGGAGTCGGGGAGGCGGGTGGTG +
Preference number: 1 (lower is better)
Translates to: GLLLCSGRGSPSTEL*PQQVHSWESGRRVV
Trigger: CACCACCCGCCTCCCCGACTCCCAAGAGTGCACCTGCTGCGGCCACAGCTCCGTGGAAGGACTCCCCCTACCTGAGCAGAGCAGAAGCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360578.7
3UTR CCA 90 bp GGCCGTGCTTGTCTGAGGCCAACCAGGGACCAGGAGGCAGCGTCCTaGTGCCCAGCACCTCTCCTCAGTGTCCCTCGTCCCCACAGACCG +
Preference number: 1 (lower is better)
Translates to: GRACLRPTRDQEAAS*CPAPLLSVPRPHRP
Trigger: CGGTCTGTGGGGACGAGGGACACTGAGGAGAGGTGCTGGGCACCAGGACGCTGCCTCCTGGTCCCTGGTTGGCCTCAGACAAGCACGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360578.7
3UTR TCA 90 bp GCTGTGGCTGTGTGCGTGCCAAGGGACAGTGGCAGTGTGCCATTGTaGCAGCGGGTGGCCACACCCGTCAGCCTCCCCAGGAGGGAGCAG +
Preference number: 1 (lower is better)
Translates to: AVAVCVPRDSGSVPL*QRVATPVSLPRREQ
Trigger: CTGCTCCCTCCTGGGGAGGCTGACGGGTGTGGCCACCCGCTGTCACAATGGCACACTGCCACTGTCCCTTGGCACGCACACAGCCACAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360578.7
3UTR CCA 90 bp TCCGTCCTGACCCGGCGCCAGGCTCAGCTCCAGGGCGAGGTCCTCTaGAGTCATGTTCGTTCTGCGTGGCTTGGCCGTGACTGTGGGGAC +
Preference number: 1 (lower is better)
Translates to: SVLTRRQAQLQGEVL*SHVRSAWLGRDCGD
Trigger: GTCCCCACAGTCACGGCCAAGCCACGCAGAACGAACATGACTCCAGAGGACCTCGCCCTGGAGCTGAGCCTGGCGCCGGGTCAGGACGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360578.7
3UTR CCA 90 bp TGCCCGGGCCGGGCGGAGGCTCTTCTCGTGCTCAGGGCCGGTTTCTaGTGTGCTCCCGATGCGCTTGGCTCTTTTCTCGAGGCCGTGCTT +
Preference number: 1 (lower is better)
Translates to: CPGRAEALLVLRAGF*CAPDALGSFLEAVL
Trigger: AAGCACGGCCTCGAGAAAAGAGCCAAGCGCATCGGGAGCACACCAGAAACCGGCCCTGAGCACGAGAAGAGCCTCCGCCCGGCCCGGGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360578.7
3UTR GCA 90 bp CACGTGTGGCTGTGGCTGTGTGCGTGCCAAGGGACAGTGGCAGTGTaGCATTGTGACAGCGGGTGGCCACACCCGTCAGCCTCCCCAGGA +
Preference number: 1 (lower is better)
Translates to: HVWLWLCACQGTVAV*HCDSGWPHPSASPG
Trigger: TCCTGGGGAGGCTGACGGGTGTGGCCACCCGCTGTCACAATGGCACACTGCCACTGTCCCTTGGCACGCACACAGCCACAGCCACACGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360578.7
3UTR GCA 90 bp GGGCCGGGCGGAGGCTCTTCTCGTGCTCAGGGCCGGTTTCTGGTGTaGTCCCGATGCGCTTGGCTCTTTTCTCGAGGCCGTGCTTGTCTG +
Preference number: 1 (lower is better)
Translates to: GPGGGSSRAQGRFLV*SRCAWLFSRGRACL
Trigger: CAGACAAGCACGGCCTCGAGAAAAGAGCCAAGCGCATCGGGAGCACACCAGAAACCGGCCCTGAGCACGAGAAGAGCCTCCGCCCGGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360578.7
3UTR GCA 90 bp TCTCCCTCCAGGATCCCAGGGTGCTCCAGGCCAGGACGGGCAGGGTaGCACAGCAGCCTCGATCTCATTCACGAAACCCACAGGCGTGGC +
Preference number: 1 (lower is better)
Translates to: SPSRIPGCSRPGRAG*HSSLDLIHETHRRG
Trigger: GCCACGCCTGTGGGTTTCGTGAATGAGATCGAGGCTGCTGTGGCACCCTGCCCGTCCTGGCCTGGAGCACCCTGGGATCCTGGAGGGAGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360578.7
3UTR TCA 90 bp GGTGGGAGGGTGGCCAGTGCACGCGTGATTGCCCACAGGAGGAGATaGGCTGGGCCAGTAGAGGGACAGGTAAGTGTCCAGGGCCAAGGC +
Preference number: 1 (lower is better)
Translates to: GGRVASARVIAHRRR*AGPVEGQVSVQGQG
Trigger: GCCTTGGCCCTGGACACTTACCTGTCCCTCTACTGGCCCAGCTCATCTCCTCCTGTGGGCAATCACGCGTGCACTGGCCACCCTCCCACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360578.7
3UTR CCA 90 bp CACAGGACAGGCCTCGGGCCCCACAGACACCTCCCACGTCCGGTGTaGGGCCAATTCCGTGTTAGTTGCCTGCTGGTTGGGGTTAGCTCC +
Preference number: 1 (lower is better)
Translates to: HRTGLGPHRHLPRPV*GQFRVSCLLVGVSS
Trigger: GGAGCTAACCCCAACCAGCAGGCAACTAACACGGAATTGGCCCCACACCGGACGTGGGAGGTGTCTGTGGGGCCCGAGGCCTGTCCTGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360578.7
3UTR CCA 90 bp GCAGGTCACACGTGTGGCTGTGGCTGTGTGCGTGCCAAGGGACAGTaGCAGTGTGCCATTGTGACAGCGGGTGGCCACACCCGTCAGCCT +
Preference number: 1 (lower is better)
Translates to: AGHTCGCGCVRAKGQ*QCAIVTAGGHTRQP
Trigger: AGGCTGACGGGTGTGGCCACCCGCTGTCACAATGGCACACTGCCACTGTCCCTTGGCACGCACACAGCCACAGCCACACGTGTGACCTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360578.7
3UTR CCA 90 bp GGGTGTAAGGGTGCCAGGGCCTTCCGGGTCTCAGGCTTCGGGACCTaGGGAGCCACCCTGTTTGGTGACCACTCGTCCTCGGCCTTTTCA +
Preference number: 1 (lower is better)
Translates to: GCKGARAFRVSGFGT*GATLFGDHSSSAFS
Trigger: TGAAAAGGCCGAGGACGAGTGGTCACCAAACAGGGTGGCTCCCCAGGTCCCGAAGCCTGAGACCCGGAAGGCCCTGGCACCCTTACACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360578.7
3UTR CCA 90 bp GCTCAGCTCCAGGGCGAGGTCCTCTGGAGTCATGTTCGTTCTGCGTaGCTTGGCCGTGACTGTGGGGACTGGGCTGCCCACGGACAGAAA +
Preference number: 1 (lower is better)
Translates to: AQLQGEVLWSHVRSA*LGRDCGDWAAHGQK
Trigger: TTTCTGTCCGTGGGCAGCCCAGTCCCCACAGTCACGGCCAAGCCACGCAGAACGAACATGACTCCAGAGGACCTCGCCCTGGAGCTGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360578.7
3UTR TCA 90 bp ACAGTCCAAGCCACTGTGGTCAGCCGGGAAGCCGCCCACTGCCCCTaGCGGCTTTCGTTTTACCTAGGTTGCCCTTGGCACAGAGCTGGC +
Preference number: 1 (lower is better)
Translates to: TVQATVVSREAAHCP*RLSFYLGCPWHRAG
Trigger: GCCAGCTCTGTGCCAAGGGCAACCTAGGTAAAACGAAAGCCGTCAGGGGCAGTGGGCGGCTTCCCGGCTGACCACAGTGGCTTGGACTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360578.7
3UTR GCA 90 bp TGGGGCCAATTCCGTGTTAGTTGCCTGCTGGTTGGGGTTAGCTCCTaGCACCCTCAGGGCTCCTGGAAGGTGTCTGCCGCTCAGGAGGTC +
Preference number: 1 (lower is better)
Translates to: WGQFRVSCLLVGVSS*HPQGSWKVSAAQEV
Trigger: GACCTCCTGAGCGGCAGACACCTTCCAGGAGCCCTGAGGGTGGCAGGAGCTAACCCCAACCAGCAGGCAACTAACACGGAATTGGCCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360578.7
3UTR GCA 90 bp GTTTCTGGTGTGCTCCCGATGCGCTTGGCTCTTTTCTCGAGGCCGTaGTTGTCTGAGGCCAACCAGGGACCAGGAGGCAGCGTCCTGGTG +
Preference number: 1 (lower is better)
Translates to: VSGVLPMRLALFSRP*LSEANQGPGGSVLV
Trigger: CACCAGGACGCTGCCTCCTGGTCCCTGGTTGGCCTCAGACAAGCACGGCCTCGAGAAAAGAGCCAAGCGCATCGGGAGCACACCAGAAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360578.7
3UTR GCA 90 bp GGAGGCTCTTCTCGTGCTCAGGGCCGGTTTCTGGTGTGCTCCCGATaGGCTTGGCTCTTTTCTCGAGGCCGTGCTTGTCTGAGGCCAACC +
Preference number: 1 (lower is better)
Translates to: GGSSRAQGRFLVCSR*AWLFSRGRACLRPT
Trigger: GGTTGGCCTCAGACAAGCACGGCCTCGAGAAAAGAGCCAAGCGCATCGGGAGCACACCAGAAACCGGCCCTGAGCACGAGAAGAGCCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360578.7
3UTR CCA 90 bp TGGAGTCATGTTCGTTCTGCGTGGCTTGGCCGTGACTGTGGGGACTaGGCTGCCCACGGACAGAAAGGAGAAACGCAGCCTGTGACCAGG +
Preference number: 1 (lower is better)
Translates to: WSHVRSAWLGRDCGD*AAHGQKGETQPVTR
Trigger: CCTGGTCACAGGCTGCGTTTCTCCTTTCTGTCCGTGGGCAGCCCAGTCCCCACAGTCACGGCCAAGCCACGCAGAACGAACATGACTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360578.7
3UTR CCA 90 bp TCTTCTCGTGCTCAGGGCCGGTTTCTGGTGTGCTCCCGATGCGCTTaGCTCTTTTCTCGAGGCCGTGCTTGTCTGAGGCCAACCAGGGAC +
Preference number: 1 (lower is better)
Translates to: SSRAQGRFLVCSRCA*LFSRGRACLRPTRD
Trigger: GTCCCTGGTTGGCCTCAGACAAGCACGGCCTCGAGAAAAGAGCCAAGCGCATCGGGAGCACACCAGAAACCGGCCCTGAGCACGAGAAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360578.7
3UTR TCA 90 bp CTTCCGGGTCTCAGGCTTCGGGACCTGGGGAGCCACCCTGTTTGGTaGCCACTCGTCCTCGGCCTTTTCAACACAAGGGCTTTGGAGTTG +
Preference number: 1 (lower is better)
Translates to: LPGLRLRDLGSHPVW*PLVLGLFNTRALEL
Trigger: CAACTCCAAAGCCCTTGTGTTGAAAAGGCCGAGGACGAGTGGTCACCAAACAGGGTGGCTCCCCAGGTCCCGAAGCCTGAGACCCGGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360578.7
3UTR CCA 90 bp GGAAAGCAAAGCGAGCCTACTCTACCCTCACAGTCCAAGCCACTGTaGTCAGCCGGGAAGCCGCCCACTGCCCCTGACGGCTTTCGTTTT +
Preference number: 1 (lower is better)
Translates to: GKQSEPTLPSQSKPL*SAGKPPTAPDGFRF
Trigger: AAAACGAAAGCCGTCAGGGGCAGTGGGCGGCTTCCCGGCTGACCACAGTGGCTTGGACTGTGAGGGTAGAGTAGGCTCGCTTTGCTTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360578.7
3UTR GCA 90 bp CTGTCACGCGGTGAGGCGAGGAGTGTCTCGGCACTTCGTGTCTCTTaGCTGGCAACACCACAGGGACCGGACATTCTGAATCTTCCCAGA +
Preference number: 1 (lower is better)
Translates to: LSRGEARSVSALRVS*LATPQGPDILNLPR
Trigger: TCTGGGAAGATTCAGAATGTCCGGTCCCTGTGGTGTTGCCAGGCAAGAGACACGAAGTGCCGAGACACTCCTCGCCTCACCGCGTGACAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360578.7
3UTR CCA 90 bp AGGGTGCCACAGCAGCCTCGATCTCATTCACGAAACCCACAGGCGTaGCCTAGGGTTTGGGATGCACGCCACGATTTTCTCTCTCAGAGT +
Preference number: 1 (lower is better)
Translates to: RVPQQPRSHSRNPQA*PRVWDARHDFLSQS
Trigger: ACTCTGAGAGAGAAAATCGTGGCGTGCATCCCAAACCCTAGGCCACGCCTGTGGGTTTCGTGAATGAGATCGAGGCTGCTGTGGCACCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360578.7
3UTR CCA 90 bp GCTGCTTTAAAACGCCCCTTTGACCTGCAAACCACGTGCCCAGTGTaGTGTGATCCGCGAGACACTTTGGAAATGGCTGAGGACGAGGCA +
Preference number: 1 (lower is better)
Translates to: AALKRPFDLQTTCPV*CDPRDTLEMAEDEA
Trigger: TGCCTCGTCCTCAGCCATTTCCAAAGTGTCTCGCGGATCACACCACACTGGGCACGTGGTTTGCAGGTCAAAGGGGCGTTTTAAAGCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360578.7
3UTR CCA 90 bp CTGTTTGGTGACCACTCGTCCTCGGCCTTTTCAACACAAGGGCTTTaGAGTTGTGATGGGCTGTTATCGGGTGATTCCGGTGGCCACTCG +
Preference number: 1 (lower is better)
Translates to: LFGDHSSSAFSTQGL*SCDGLLSGDSGGHS
Trigger: CGAGTGGCCACCGGAATCACCCGATAACAGCCCATCACAACTCCAAAGCCCTTGTGTTGAAAAGGCCGAGGACGAGTGGTCACCAAACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360578.7
3UTR CCA 90 bp CAGCCTCGATCTCATTCACGAAACCCACAGGCGTGGCCTAGGGTTTaGGATGCACGCCACGATTTTCTCTCTCAGAGTGAAGGGACCACT +
Preference number: 1 (lower is better)
Translates to: QPRSHSRNPQAWPRV*DARHDFLSQSEGTT
Trigger: AGTGGTCCCTTCACTCTGAGAGAGAAAATCGTGGCGTGCATCCCAAACCCTAGGCCACGCCTGTGGGTTTCGTGAATGAGATCGAGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360578.7
3UTR CCA 90 bp TGCCCAGGACTCCCCATCACATGCCCAGGGACAAACGCTGCACCCTaGACCACCAGAGCTCACAAAGTGTTCAGTAGTAAGAGGAGGAAA +
Preference number: 1 (lower is better)
Translates to: CPGLPITCPGTNAAP*TTRAHKVFSSKRRK
Trigger: TTTCCTCCTCTTACTACTGAACACTTTGTGAGCTCTGGTGGTCCAGGGTGCAGCGTTTGTCCCTGGGCATGTGATGGGGAGTCCTGGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360578.7
3UTR GCA 90 bp AAACTGACTGAGGAAGATGCACGGGTCTGTTATGTGCAGTGGGGCTaGCGTCCAAACAATGTTCTGTGTTCGGAGGCGGCACACAGATGC +
Preference number: 1 (lower is better)
Translates to: KLTEEDARVCYVQWG*RPNNVLCSEAAHRC
Trigger: GCATCTGTGTGCCGCCTCCGAACACAGAACATTGTTTGGACGGCAGCCCCACTGCACATAACAGACCCGTGCATCTTCCTCAGTCAGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360578.7
3UTR GCA 90 bp ACAGGAGCAGTGTGCACACAGACACGAGCTGTTTCACTACAGGTTTaGAAGCCAGGCTCAACAGCAAGTCCAACAGGCAACACCACACCT +
Preference number: 1 (lower is better)
Translates to: TGAVCTQTRAVSLQV*KPGSTASPTGNTTP
Trigger: AGGTGTGGTGTTGCCTGTTGGACTTGCTGTTGAGCCTGGCTTGCAAACCTGTAGTGAAACAGCTCGTGTCTGTGTGCACACTGCTCCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360578.7
3UTR CCA 90 bp ATTCAGAAACTGACTGAGGAAGATGCACGGGTCTGTTATGTGCAGTaGGGCTGCCGTCCAAACAATGTTCTGTGTTCGGAGGCGGCACAC +
Preference number: 1 (lower is better)
Translates to: IQKLTEEDARVCYVQ*GCRPNNVLCSEAAH
Trigger: GTGTGCCGCCTCCGAACACAGAACATTGTTTGGACGGCAGCCCCACTGCACATAACAGACCCGTGCATCTTCCTCAGTCAGTTTCTGAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360578.7
3UTR GCA 90 bp GGCTGCCGTCCAAACAATGTTCTGTGTTCGGAGGCGGCACACAGATaGAATTACGGATTCCACAGACAAGTTGTAACTGACAGTGGTGAC +
Preference number: 1 (lower is better)
Translates to: GCRPNNVLCSEAAHR*NYGFHRQVVTDSGD
Trigger: GTCACCACTGTCAGTTACAACTTGTCTGTGGAATCCGTAATTGCATCTGTGTGCCGCCTCCGAACACAGAACATTGTTTGGACGGCAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360578.7
3UTR TCA 90 bp AAGAGAACACACACCTGCCTGAATTCACAATATTCAGAAACTGACTaGGGAAGATGCACGGGTCTGTTATGTGCAGTGGGGCTGCCGTCC +
Preference number: 1 (lower is better)
Translates to: KRTHTCLNSQYSETD*GRCTGLLCAVGLPS
Trigger: GGACGGCAGCCCCACTGCACATAACAGACCCGTGCATCTTCCTCAGTCAGTTTCTGAATATTGTGAATTCAGGCAGGTGTGTGTTCTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360578.7
3UTR TCA 90 bp GCAGAAGAGAACACACACCTGCCTGAATTCACAATATTCAGAAACTaGCTGAGGAAGATGCACGGGTCTGTTATGTGCAGTGGGGCTGCC +
Preference number: 1 (lower is better)
Translates to: AEENTHLPEFTIFRN*LRKMHGSVMCSGAA
Trigger: GGCAGCCCCACTGCACATAACAGACCCGTGCATCTTCCTCAGTCAGTTTCTGAATATTGTGAATTCAGGCAGGTGTGTGTTCTCTTCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360578.7
3UTR TCA 90 bp GTCAGAACAGCCATGACGTGGACATCACCCGTCACACTGATAAAGTaGTGCACTCAGTACTCCCTAATGTTAATCACACAGTGTAAAAAT +
Preference number: 1 (lower is better)
Translates to: VRTAMTWTSPVTLIK*CTQYSLMLITQCKN
Trigger: ATTTTTACACTGTGTGATTAACATTAGGGAGTACTGAGTGCATCACTTTATCAGTGTGACGGGTGATGTCCACGTCATGGCTGTTCTGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000360578.7
3UTR-3UTR TCA 90 bp CTCGTCCCCACAGACCGGATCAGGGCCTGGCGAGCCTCTGTGCCTGCCGTGCGGCCCTTCCCTCCGTCCTaGCCCGGCGCCAGGCTCAGC +
Preference number: 2 (lower is better)
Translates to: LVPTDRIRAWRASVPAVRPFPPS*PGARLS
Trigger: GCTGAGCCTGGCGCCGGGTCAGGACGGAGGGAAGGG...CCGCACGGCAGGCACAGAGGCTCGCCAGGCCCTGATCCGGTCTGTGGGGACGAG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360578.7
3UTR-3UTR GCA 90 bp GTGAGGACCCGCGGACCCCAACCCGCCCTTCCCTCCGTCCTGACCCGGCGCCAGGTGGCTGTGGCTGTGTaGGTGCCAAGGGACAGTGGC +
Preference number: 2 (lower is better)
Translates to: VRTRGPQPALPSVLTRRQVAVAV*VPRDSG
Trigger: GCCACTGTCCCTTGGCACGCACACAGCCACAGCCAC...CTGGCGCCGGGTCAGGACGGAGGGAAGGGCGGGTTGGGGTCCGCGGGTCCTCAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360578.7
3UTR-3UTR TCA 90 bp TCGTCCCCACAGACCGGATCAGGGCCTGGCGAGCCTCTGTGCCTGCCGTGCGGTCACCCTCCTGTACTGTaGGCCTGGCCCTGGGCAGCC +
Preference number: 2 (lower is better)
Translates to: SSPQTGSGPGEPLCLPCGHPPVL*AWPWAA
Trigger: GGCTGCCCAGGGCCAGGCTCACAGTACAGGAGGGTG...ACCGCACGGCAGGCACAGAGGCTCGCCAGGCCCTGATCCGGTCTGTGGGGACGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360578.7
3UTR-3UTR TCA 90 bp GTGAGGACCCGCGGACCCCAACCCGCCCTTCCCTCCGTCCTGACCCGGCGCCAGTGGGCTGTTATCGGGTaGTTCCGGTGGCCACTCGTC +
Preference number: 2 (lower is better)
Translates to: VRTRGPQPALPSVLTRRQWAVIG*FRWPLV
Trigger: GACGAGTGGCCACCGGAATCACCCGATAACAGCCCA...CTGGCGCCGGGTCAGGACGGAGGGAAGGGCGGGTTGGGGTCCGCGGGTCCTCAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360578.7
3UTR-3UTR CCA 90 bp GCCGTGCGGTGTGAGGACCCGCGGACCCCAACCCGCCCTTCCCTCCGTCCTGACAGCAGGAAGGCCCCGTaGTGTCCGCTGCACACAGGA +
Preference number: 2 (lower is better)
Translates to: AVRCEDPRTPTRPSLRPDSRKAP*CPLHTG
Trigger: TCCTGTGTGCAGCGGACACCACGGGGCCTTCCTGCT...GTCAGGACGGAGGGAAGGGCGGGTTGGGGTCCGCGGGTCCTCACACCGCACGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360578.7
3UTR-3UTR CCA 90 bp GCCGTGCGGTGTGAGGACCCGCGGACCCCAACCCGCCCTTCCCTCCGTCCTGACGTGGAGTGTCCTGGATaGGCTCTGCTCAGCCCCCTG +
Preference number: 2 (lower is better)
Translates to: AVRCEDPRTPTRPSLRPDVECPG*ALLSPL
Trigger: CAGGGGGCTGAGCAGAGCCCATCCAGGACACTCCAC...GTCAGGACGGAGGGAAGGGCGGGTTGGGGTCCGCGGGTCCTCACACCGCACGGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360578.7
3UTR-3UTR CCA 90 bp CTCGTCCCCACAGACCGGATCAGGGCCTGGCGAGCCTCTGTGCCTGCCGTGCGGAGTCGGGGAGGCGGGTaGTGCTCATGCGTGCCAGTG +
Preference number: 2 (lower is better)
Translates to: LVPTDRIRAWRASVPAVRSRGGG*CSCVPV
Trigger: CACTGGCACGCATGAGCACCACCCGCCTCCCCGACT...CCGCACGGCAGGCACAGAGGCTCGCCAGGCCCTGATCCGGTCTGTGGGGACGAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360578.7
3UTR-3UTR GCA 90 bp GGACTGCCGCAGGCTCATCCGCAGGTAGACTCCAGAACCACGGCCCAGCAGGTCTGGGGACACCGGCAGTaGCGCGAGGCATGGAGCGGG +
Preference number: 2 (lower is better)
Translates to: GLPQAHPQVDSRTTAQQVWGHRQ*REAWSG
Trigger: CCCGCTCCATGCCTCGCGGCACTGCCGGTGTCCCCA...GACCTGCTGGGCCGTGGTTCTGGAGTCTACCTGCGGATGAGCCTGCGGCAGTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360578.7
3UTR-3UTR GCA 90 bp GCCGTGCGGTGTGAGGACCCGCGGACCCCAACCCGCCCTTCCCTCCGTCCTGACCTGTGGGGACTGGGCTaGCCACGGACAGAAAGGAGA +
Preference number: 2 (lower is better)
Translates to: AVRCEDPRTPTRPSLRPDLWGLG*PRTERR
Trigger: TCTCCTTTCTGTCCGTGGGCAGCCCAGTCCCCACAG...GTCAGGACGGAGGGAAGGGCGGGTTGGGGTCCGCGGGTCCTCACACCGCACGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360578.7
3UTR-3UTR TCA 90 bp GCCGTGCGGTGTGAGGACCCGCGGACCCCAACCCGCCCTTCCCTCCGTCCTGACAGGGACCGGACATTCTaGATCTTCCCAGACCCGCTC +
Preference number: 2 (lower is better)
Translates to: AVRCEDPRTPTRPSLRPDRDRTF*IFPDPL
Trigger: GAGCGGGTCTGGGAAGATTCAGAATGTCCGGTCCCT...GTCAGGACGGAGGGAAGGGCGGGTTGGGGTCCGCGGGTCCTCACACCGCACGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360578.7
3UTR-3UTR TCA 90 bp CTCCCCATCACATGCCCAGGGACAAACGCTGCACCCTGGACCACCAGAGCTCACGCCGTGTGGGCGAGGTaGCCCGTCGGTGACAGGGCC +
Preference number: 2 (lower is better)
Translates to: LPITCPGTNAAPWTTRAHAVWAR*PVGDRA
Trigger: GGCCCTGTCACCGACGGGTCACCTCGCCCACACGGC...GTGAGCTCTGGTGGTCCAGGGTGCAGCGTTTGTCCCTGGGCATGTGATGGGGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360578.7
3UTR-3UTR GCA 90 bp CTCGTCCCCACAGACCGGATCAGGGCCTGGCGAGCCTCTGTGCCTGCCGTGCGGGGGACAGTGGCAGTGTaGCATTGTGACAGCGGGTGG +
Preference number: 2 (lower is better)
Translates to: LVPTDRIRAWRASVPAVRGTVAV*HCDSGW
Trigger: CCACCCGCTGTCACAATGGCACACTGCCACTGTCCC...CCGCACGGCAGGCACAGAGGCTCGCCAGGCCCTGATCCGGTCTGTGGGGACGAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360578.7
3UTR-3UTR CCA 90 bp GCCGTGCGGTGTGAGGACCCGCGGACCCCAACCCGCCCTTCCCTCCGTCCTGACCTCCCACGTCCGGTGTaGGGCCAATTCCGTGTTAGT +
Preference number: 2 (lower is better)
Translates to: AVRCEDPRTPTRPSLRPDLPRPV*GQFRVS
Trigger: ACTAACACGGAATTGGCCCCACACCGGACGTGGGAG...GTCAGGACGGAGGGAAGGGCGGGTTGGGGTCCGCGGGTCCTCACACCGCACGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360578.7
3UTR-3UTR CCA 90 bp CTCGTCCCCACAGACCGGATCAGGGCCTGGCGAGCCTCTGTGCCTGCCGTGCGGTCAGGCTTCGGGACCTaGGGAGCCACCCTGTTTGGT +
Preference number: 2 (lower is better)
Translates to: LVPTDRIRAWRASVPAVRSGFGT*GATLFG
Trigger: ACCAAACAGGGTGGCTCCCCAGGTCCCGAAGCCTGA...CCGCACGGCAGGCACAGAGGCTCGCCAGGCCCTGATCCGGTCTGTGGGGACGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360578.7
3UTR-3UTR CCA 90 bp CAGGGCCGGTTTCTGGTGTGCTCCCGATGCGCTTGGCTCTTTTCTCGAGGCCGTAGGGTGGAGCCGCGCTaGGGCCAGGGAGGCCGAGGA +
Preference number: 2 (lower is better)
Translates to: QGRFLVCSRCAWLFSRGRRVEPR*GQGGRG
Trigger: TCCTCGGCCTCCCTGGCCCCAGCGCGGCTCCACCCT...ACGGCCTCGAGAAAAGAGCCAAGCGCATCGGGAGCACACCAGAAACCGGCCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360578.7
3UTR-3UTR GCA 90 bp GCCGTGCGGTGTGAGGACCCGCGGACCCCAACCCGCCCTTCCCTCCGTCCTGACAGCACAGCCTCCTGTTaGCATGACAGCCAGCTGCTT +
Preference number: 2 (lower is better)
Translates to: AVRCEDPRTPTRPSLRPDSTASC*HDSQLL
Trigger: AAGCAGCTGGCTGTCATGGCAACAGGAGGCTGTGCT...GTCAGGACGGAGGGAAGGGCGGGTTGGGGTCCGCGGGTCCTCACACCGCACGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360578.7
3UTR-3UTR GCA 90 bp GTGAGGACCCGCGGACCCCAACCCGCCCTTCCCTCCGTCCTGACCCGGCGCCAGTCCGTGTTAGTTGCCTaGTGGTTGGGGTTAGCTCCT +
Preference number: 2 (lower is better)
Translates to: VRTRGPQPALPSVLTRRQSVLVA*WLGLAP
Trigger: AGGAGCTAACCCCAACCAGCAGGCAACTAACACGGA...CTGGCGCCGGGTCAGGACGGAGGGAAGGGCGGGTTGGGGTCCGCGGGTCCTCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360578.7
3UTR-3UTR GCA 90 bp GAGGACCCGCGGACCCCAACCCGCCCTTCCCTCCGTCCTGACCCGGCGCCAGGCCAATTCCGTGTTAGTTaGCTGCTGGTTGGGGTTAGC +
Preference number: 2 (lower is better)
Translates to: EDPRTPTRPSLRPDPAPGQFRVS*LLVGVS
Trigger: GCTAACCCCAACCAGCAGGCAACTAACACGGAATTG...GCCTGGCGCCGGGTCAGGACGGAGGGAAGGGCGGGTTGGGGTCCGCGGGTCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360578.7
3UTR-3UTR CCA 90 bp CTCGTCCCCACAGACCGGATCAGGGCCTGGCGAGCCTCTGTGCCTGCCGTGCGGACCACGTGCCCAGTGTaGTGTGATCCGCGAGACACT +
Preference number: 2 (lower is better)
Translates to: LVPTDRIRAWRASVPAVRTTCPV*CDPRDT
Trigger: AGTGTCTCGCGGATCACACCACACTGGGCACGTGGT...CCGCACGGCAGGCACAGAGGCTCGCCAGGCCCTGATCCGGTCTGTGGGGACGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360578.7
3UTR-3UTR CCA 90 bp GTGAGGACCCGCGGACCCCAACCCGCCCTTCCCTCCGTCCTGACCCGGCGCCAGGTTGAAGAAGGTGCTTaGGCTGTGGCAATGGGAGGT +
Preference number: 2 (lower is better)
Translates to: VRTRGPQPALPSVLTRRQVEEGA*AVAMGG
Trigger: ACCTCCCATTGCCACAGCCCAAGCACCTTCTTCAAC...CTGGCGCCGGGTCAGGACGGAGGGAAGGGCGGGTTGGGGTCCGCGGGTCCTCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360578.7
3UTR-3UTR TCA 90 bp TCGTCCCCACAGACCGGATCAGGGCCTGGCGAGCCTCTGTGCCTGCCGTGCGGTGTGCCCAGTGTGGTGTaGTCCGCGAGACACTTTGGA +
Preference number: 2 (lower is better)
Translates to: SSPQTGSGPGEPLCLPCGVPSVV*SARHFG
Trigger: TCCAAAGTGTCTCGCGGATCACACCACACTGGGCAC...ACCGCACGGCAGGCACAGAGGCTCGCCAGGCCCTGATCCGGTCTGTGGGGACGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360578.7
3UTR CAA 90 bp TCTGGTGTGCTCCCGATGCGCTTGGCTCTTTTCTCGAGGCCGTGCTaGTCTGAGGCCAACCAGGGACCAGGAGGCAGCGTCCTGGTGCCC +
Preference number: 2 (lower is better)
Translates to: SGVLPMRLALFSRPC*SEANQGPGGSVLVP
Trigger: GGGCACCAGGACGCTGCCTCCTGGTCCCTGGTTGGCCTCAGACAAGCACGGCCTCGAGAAAAGAGCCAAGCGCATCGGGAGCACACCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360578.7
3UTR-3UTR GCA 90 bp CTCTTCTCGTGCTCAGGGCCGGTTTCTGGTGTGCTCCCGATGCGCTTGGCTCTTGGCGGGTGGTGCTCATaGGTGCCAGTGAGGGAGGGG +
Preference number: 2 (lower is better)
Translates to: LFSCSGPVSGVLPMRLALGGWCS*VPVREG
Trigger: CCCCTCCCTCACTGGCACGCATGAGCACCACCCGCC...AAGAGCCAAGCGCATCGGGAGCACACCAGAAACCGGCCCTGAGCACGAGAAGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360578.7
3UTR-3UTR GCA 90 bp TTTTCTCGAGGCCGTGCTTGTCTGAGGCCAACCAGGGACCAGGAGGCAGCGTCCGCCGTGGAAGCTGCCTaGCAGGTCCTCCCCATCCTC +
Preference number: 2 (lower is better)
Translates to: FSRGRACLRPTRDQEAASAVEAA*QVLPIL
Trigger: GAGGATGGGGAGGACCTGGCAGGCAGCTTCCACGGC...GGACGCTGCCTCCTGGTCCCTGGTTGGCCTCAGACAAGCACGGCCTCGAGAAAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360578.7
3UTR-3UTR GCA 90 bp CTCCCCATCACATGCCCAGGGACAAACGCTGCACCCTGGACCACCAGAGCTCACGCTGTGGTGAGTCGGTaGTGGCCGTGTGGGCGAGGT +
Preference number: 2 (lower is better)
Translates to: LPITCPGTNAAPWTTRAHAVVSR*WPCGRG
Trigger: ACCTCGCCCACACGGCCAGCACCGACTCACCACAGC...GTGAGCTCTGGTGGTCCAGGGTGCAGCGTTTGTCCCTGGGCATGTGATGGGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360578.7
3UTR-3UTR CCA 90 bp GCAGGCTCATCCGCAGGTAGACTCCAGAACCACGGCCCAGCAGGTCACACGTGTACAGAGTCCCTGCTCTaGGGACACCGGCAGTGCCGC +
Preference number: 2 (lower is better)
Translates to: AGSSAGRLQNHGPAGHTCTESLL*GHRQCR
Trigger: GCGGCACTGCCGGTGTCCCCAGAGCAGGGACTCTGT...ACACGTGTGACCTGCTGGGCCGTGGTTCTGGAGTCTACCTGCGGATGAGCCTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360578.7
3UTR-3UTR CCA 90 bp GGACTGCCGCAGGCTCATCCGCAGGTAGACTCCAGAACCACGGCCCAGCAGGTCTTGAGAGGGGAGTGCTaGGGGCATCCGGTAGGAGGA +
Preference number: 2 (lower is better)
Translates to: GLPQAHPQVDSRTTAQQVLRGEC*GHPVGG
Trigger: TCCTCCTACCGGATGCCCCCAGCACTCCCCTCTCAA...GACCTGCTGGGCCGTGGTTCTGGAGTCTACCTGCGGATGAGCCTGCGGCAGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360578.7
3UTR-3UTR CCA 90 bp CTCGTCCCCACAGACCGGATCAGGGCCTGGCGAGCCTCTGTGCCTGCCGTGCGGGAGACACTTTGGAAATaGCTGAGGACGAGGCAGGTG +
Preference number: 2 (lower is better)
Translates to: LVPTDRIRAWRASVPAVRETLWK*LRTRQV
Trigger: CACCTGCCTCGTCCTCAGCCATTTCCAAAGTGTCTC...CCGCACGGCAGGCACAGAGGCTCGCCAGGCCCTGATCCGGTCTGTGGGGACGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360578.7
3UTR-3UTR CCA 90 bp GGACTGCCGCAGGCTCATCCGCAGGTAGACTCCAGAACCACGGCCCAGCAGGTCTGCTCAGCCCCCTGCTaGCAGAGAAACCCCCACAGA +
Preference number: 2 (lower is better)
Translates to: GLPQAHPQVDSRTTAQQVCSAPC*QRNPHR
Trigger: TCTGTGGGGGTTTCTCTGCCAGCAGGGGGCTGAGCA...GACCTGCTGGGCCGTGGTTCTGGAGTCTACCTGCGGATGAGCCTGCGGCAGTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000360578.7
3UTR CAA 90 bp AGCTCCAGGGCGAGGTCCTCTGGAGTCATGTTCGTTCTGCGTGGCTaGGCCGTGACTGTGGGGACTGGGCTGCCCACGGACAGAAAGGAG +
Preference number: 2 (lower is better)
Translates to: SSRARSSGVMFVLRG*AVTVGTGLPTDRKE
Trigger: CTCCTTTCTGTCCGTGGGCAGCCCAGTCCCCACAGTCACGGCCAAGCCACGCAGAACGAACATGACTCCAGAGGACCTCGCCCTGGAGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360578.7
3UTR-3UTR GCA 90 bp GCAGGCTCATCCGCAGGTAGACTCCAGAACCACGGCCCAGCAGGTCACACGTGTCTCTGCTCAGCCCCCTaGTGGCAGAGAAACCCCCAC +
Preference number: 2 (lower is better)
Translates to: AGSSAGRLQNHGPAGHTCLCSAP*WQRNPH
Trigger: GTGGGGGTTTCTCTGCCAGCAGGGGGCTGAGCAGAG...ACACGTGTGACCTGCTGGGCCGTGGTTCTGGAGTCTACCTGCGGATGAGCCTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000360578.7
3UTR CAA 90 bp TCCCACGTCCGGTGTGGGGCCAATTCCGTGTTAGTTGCCTGCTGGTaGGGGTTAGCTCCTGCCACCCTCAGGGCTCCTGGAAGGTGTCTG +
Preference number: 2 (lower is better)
Translates to: SHVRCGANSVLVACW*GLAPATLRAPGRCL
Trigger: CAGACACCTTCCAGGAGCCCTGAGGGTGGCAGGAGCTAACCCCAACCAGCAGGCAACTAACACGGAATTGGCCCCACACCGGACGTGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360578.7
3UTR CAA 90 bp CCGGGAAGCCGCCCACTGCCCCTGACGGCTTTCGTTTTACCTAGGTaGCCCTTGGCACAGAGCTGGCCTGTAGGCATGTGTGCACAGGTG +
Preference number: 2 (lower is better)
Translates to: PGSRPLPLTAFVLPR*PLAQSWPVGMCAQV
Trigger: CACCTGTGCACACATGCCTACAGGCCAGCTCTGTGCCAAGGGCAACCTAGGTAAAACGAAAGCCGTCAGGGGCAGTGGGCGGCTTCCCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360578.7
3UTR CAA 90 bp GGGCCTTCCGGGTCTCAGGCTTCGGGACCTGGGGAGCCACCCTGTTaGGTGACCACTCGTCCTCGGCCTTTTCAACACAAGGGCTTTGGA +
Preference number: 2 (lower is better)
Translates to: GPSGSQASGPGEPPC*VTTRPRPFQHKGFG
Trigger: TCCAAAGCCCTTGTGTTGAAAAGGCCGAGGACGAGTGGTCACCAAACAGGGTGGCTCCCCAGGTCCCGAAGCCTGAGACCCGGAAGGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360578.7
3UTR-3UTR TCA 90 bp CTCTTCTCGTGCTCAGGGCCGGTTTCTGGTGTGCTCCCGATGCGCTTGGCTCTTGAGAAACGCAGCCTGTaGCCAGGAGACGCAGCCCAG +
Preference number: 2 (lower is better)
Translates to: LFSCSGPVSGVLPMRLALEKRSL*PGDAAQ
Trigger: CTGGGCTGCGTCTCCTGGTCACAGGCTGCGTTTCTC...AAGAGCCAAGCGCATCGGGAGCACACCAGAAACCGGCCCTGAGCACGAGAAGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360578.7
3UTR-3UTR GCA 90 bp GCAGGCTCATCCGCAGGTAGACTCCAGAACCACGGCCCAGCAGGTCACACGTGTGGTTTGAGAGGGGAGTaGTGGGGGCATCCGGTAGGA +
Preference number: 2 (lower is better)
Translates to: AGSSAGRLQNHGPAGHTCGLRGE*WGHPVG
Trigger: TCCTACCGGATGCCCCCAGCACTCCCCTCTCAAACC...ACACGTGTGACCTGCTGGGCCGTGGTTCTGGAGTCTACCTGCGGATGAGCCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360578.7
3UTR-3UTR GCA 90 bp GCCACCCTGTTTGGTGACCACTCGTCCTCGGCCTTTTCAACACAAGGGCTTTGGCCCCGTGGTGTCCGCTaGACACAGGACAGGCCTCGG +
Preference number: 2 (lower is better)
Translates to: ATLFGDHSSSAFSTQGLWPRGVR*TQDRPR
Trigger: CCGAGGCCTGTCCTGTGTGCAGCGGACACCACGGGG...CCAAAGCCCTTGTGTTGAAAAGGCCGAGGACGAGTGGTCACCAAACAGGGTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360578.7
3UTR-3UTR GCA 90 bp TTACCTAGGTTGCCCTTGGCACAGAGCTGGCCTGTAGGCATGTGTGCACAGGTGGCTTCCCCACACATGTaGCAGGCGCCCAGCACCCCC +
Preference number: 2 (lower is better)
Translates to: LPRLPLAQSWPVGMCAQVASPHM*QAPSTP
Trigger: GGGGGTGCTGGGCGCCTGGCACATGTGTGGGGAAGC...CACCTGTGCACACATGCCTACAGGCCAGCTCTGTGCCAAGGGCAACCTAGGTAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360578.7
3UTR-3UTR GCA 90 bp CTCCCCATCACATGCCCAGGGACAAACGCTGCACCCTGGACCACCAGAGCTCACCTGGGGCTTCTGCTCTaGTCAGGTAGGGGGAGTCCT +
Preference number: 2 (lower is better)
Translates to: LPITCPGTNAAPWTTRAHLGLLL*SGRGSP
Trigger: AGGACTCCCCCTACCTGAGCAGAGCAGAAGCCCCAG...GTGAGCTCTGGTGGTCCAGGGTGCAGCGTTTGTCCCTGGGCATGTGATGGGGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000360578.7
3UTR-3UTR CCA 90 bp GGGCCAGTAGAGGGACAGGTAAGTGTCCAGGGCCAAGGCATCTCCATCTCAACTCAAGGGCGGGCCGCCTaGGTGTGTCCTGGCAGTGTG +
Preference number: 2 (lower is better)
Translates to: GPVEGQVSVQGQGISISTQGRAA*VCPGSV
Trigger: CACACTGCCAGGACACACCCAGGCGGCCCGCCCTTG...AGTTGAGATGGAGATGCCTTGGCCCTGGACACTTACCTGTCCCTCTACTGGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360578.7
3UTR-3UTR CCA 90 bp CTCCCCATCACATGCCCAGGGACAAACGCTGCACCCTGGACCACCAGAGCTCACCGTGACTGTGGGGACTaGGCTGCCCACGGACAGAAA +
Preference number: 2 (lower is better)
Translates to: LPITCPGTNAAPWTTRAHRDCGD*AAHGQK
Trigger: TTTCTGTCCGTGGGCAGCCCAGTCCCCACAGTCACG...GTGAGCTCTGGTGGTCCAGGGTGCAGCGTTTGTCCCTGGGCATGTGATGGGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360578.7
3UTR CAA 90 bp CTCTTCTCGTGCTCAGGGCCGGTTTCTGGTGTGCTCCCGATGCGCTaGGCTCTTTTCTCGAGGCCGTGCTTGTCTGAGGCCAACCAGGGA +
Preference number: 2 (lower is better)
Translates to: LFSCSGPVSGVLPMR*ALFSRPCLSEANQG
Trigger: TCCCTGGTTGGCCTCAGACAAGCACGGCCTCGAGAAAAGAGCCAAGCGCATCGGGAGCACACCAGAAACCGGCCCTGAGCACGAGAAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360578.7
3UTR-3UTR CCA 90 bp CTCTTGCCTGGCAACACCACAGGGACCGGACATTCTGAATCTTCCCAGACCCGCCACCCTCAGGGCTCCTaGAAGGTGTCTGCCGCTCAG +
Preference number: 2 (lower is better)
Translates to: LLPGNTTGTGHSESSQTRHPQGS*KVSAAQ
Trigger: CTGAGCGGCAGACACCTTCCAGGAGCCCTGAGGGTG...GCGGGTCTGGGAAGATTCAGAATGTCCGGTCCCTGTGGTGTTGCCAGGCAAGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360578.7
3UTR-3UTR CCA 90 bp GCCACCCTGTTTGGTGACCACTCGTCCTCGGCCTTTTCAACACAAGGGCTTTGGCAGTCCAAGCCACTGTaGTCAGCCGGGAAGCCGCCC +
Preference number: 2 (lower is better)
Translates to: ATLFGDHSSSAFSTQGLWQSKPL*SAGKPP
Trigger: GGGCGGCTTCCCGGCTGACCACAGTGGCTTGGACTG...CCAAAGCCCTTGTGTTGAAAAGGCCGAGGACGAGTGGTCACCAAACAGGGTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360578.7
3UTR-3UTR CCA 90 bp CAGGGCCGGTTTCTGGTGTGCTCCCGATGCGCTTGGCTCTTTTCTCGAGGCCGTTTCGTGTCTCTTGCCTaGCAACACCACAGGGACCGG +
Preference number: 2 (lower is better)
Translates to: QGRFLVCSRCAWLFSRGRFVSLA*QHHRDR
Trigger: CCGGTCCCTGTGGTGTTGCCAGGCAAGAGACACGAA...ACGGCCTCGAGAAAAGAGCCAAGCGCATCGGGAGCACACCAGAAACCGGCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360578.7
3UTR-3UTR CCA 90 bp GCAGGCTCATCCGCAGGTAGACTCCAGAACCACGGCCCAGCAGGTCACACGTGTTGTGTCCTGGCAGTGTaGAGTGTCCTGGATGGGCTC +
Preference number: 2 (lower is better)
Translates to: AGSSAGRLQNHGPAGHTCCVLAV*SVLDGL
Trigger: GAGCCCATCCAGGACACTCCACACTGCCAGGACACA...ACACGTGTGACCTGCTGGGCCGTGGTTCTGGAGTCTACCTGCGGATGAGCCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360578.7
3UTR-3UTR CCA 90 bp GCAGGCTCATCCGCAGGTAGACTCCAGAACCACGGCCCAGCAGGTCACACGTGTCTTGGGCTGTGGCAATaGGAGGTCTGCGAGCAAACA +
Preference number: 2 (lower is better)
Translates to: AGSSAGRLQNHGPAGHTCLGLWQ*EVCEQT
Trigger: TGTTTGCTCGCAGACCTCCCATTGCCACAGCCCAAG...ACACGTGTGACCTGCTGGGCCGTGGTTCTGGAGTCTACCTGCGGATGAGCCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360578.7
3UTR-3UTR TCA 90 bp CCTGGCAACACCACAGGGACCGGACATTCTGAATCTTCCCAGACCCGCTCTGAGTCTGGGGCACCCGTCTaGGTTCTGCCCCAGTTAGTA +
Preference number: 2 (lower is better)
Translates to: PGNTTGTGHSESSQTRSESGAPV*VLPQLV
Trigger: TACTAACTGGGGCAGAACTCAGACGGGTGCCCCAGA...CTCAGAGCGGGTCTGGGAAGATTCAGAATGTCCGGTCCCTGTGGTGTTGCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360578.7
3UTR-3UTR TCA 90 bp CAGGGCCGGTTTCTGGTGTGCTCCCGATGCGCTTGGCTCTTTTCTCGAGGCCGTCAGGAGAGGTTAGGCTaGGCCATTTTGGGAGAGTTG +
Preference number: 2 (lower is better)
Translates to: QGRFLVCSRCAWLFSRGRQERLG*AILGEL
Trigger: CAACTCTCCCAAAATGGCTCAGCCTAACCTCTCCTG...ACGGCCTCGAGAAAAGAGCCAAGCGCATCGGGAGCACACCAGAAACCGGCCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360578.7
3UTR-3UTR TCA 90 bp CTCCCCATCACATGCCCAGGGACAAACGCTGCACCCTGGACCACCAGAGCTCACATAAGCACTCTGGCGTaGACAGTCTTCTCAGCGCTC +
Preference number: 2 (lower is better)
Translates to: LPITCPGTNAAPWTTRAHISTLA*TVFSAL
Trigger: GAGCGCTGAGAAGACTGTTCACGCCAGAGTGCTTAT...GTGAGCTCTGGTGGTCCAGGGTGCAGCGTTTGTCCCTGGGCATGTGATGGGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360578.7
3UTR-3UTR GCA 90 bp GGGCCAGTAGAGGGACAGGTAAGTGTCCAGGGCCAAGGCATCTCCATCTCAACTCTCCTGGAAGGTGTCTaGCGCTCAGGAGGTCAGCAC +
Preference number: 2 (lower is better)
Translates to: GPVEGQVSVQGQGISISTLLEGV*RSGGQH
Trigger: GTGCTGACCTCCTGAGCGGCAGACACCTTCCAGGAG...AGTTGAGATGGAGATGCCTTGGCCCTGGACACTTACCTGTCCCTCTACTGGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360578.7
3UTR-3UTR GCA 90 bp GGGCCAGTAGAGGGACAGGTAAGTGTCCAGGGCCAAGGCATCTCCATCTCAACTAAGTTTCCCCAGGACTaGCGCAGGCTCATCCGCAGG +
Preference number: 2 (lower is better)
Translates to: GPVEGQVSVQGQGISISTKFPQD*RRLIRR
Trigger: CCTGCGGATGAGCCTGCGGCAGTCCTGGGGAAACTT...AGTTGAGATGGAGATGCCTTGGCCCTGGACACTTACCTGTCCCTCTACTGGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360578.7
3UTR-3UTR CCA 90 bp TTTTCTCGAGGCCGTGCTTGTCTGAGGCCAACCAGGGACCAGGAGGCAGCGTCCATCCGCGAGACACTTTaGAAATGGCTGAGGACGAGG +
Preference number: 2 (lower is better)
Translates to: FSRGRACLRPTRDQEAASIRETL*KWLRTR
Trigger: CCTCGTCCTCAGCCATTTCCAAAGTGTCTCGCGGAT...GGACGCTGCCTCCTGGTCCCTGGTTGGCCTCAGACAAGCACGGCCTCGAGAAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360578.7
3UTR CAA 90 bp GACCTGCAAACCACGTGCCCAGTGTGGTGTGATCCGCGAGACACTTaGGAAATGGCTGAGGACGAGGCAGGTGTATTAGGAGGGTCAGCG +
Preference number: 2 (lower is better)
Translates to: DLQTTCPVWCDPRDT*EMAEDEAGVLGGSA
Trigger: CGCTGACCCTCCTAATACACCTGCCTCGTCCTCAGCCATTTCCAAAGTGTCTCGCGGATCACACCACACTGGGCACGTGGTTTGCAGGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360578.7
3UTR-3UTR TCA 90 bp CTCTTCTCGTGCTCAGGGCCGGTTTCTGGTGTGCTCCCGATGCGCTTGGCTCTTTTTAAAACGCCCCTTTaGCCTGCAAACCACGTGCCC +
Preference number: 2 (lower is better)
Translates to: LFSCSGPVSGVLPMRLALFKTPL*PANHVP
Trigger: GGGCACGTGGTTTGCAGGTCAAAGGGGCGTTTTAAA...AAGAGCCAAGCGCATCGGGAGCACACCAGAAACCGGCCCTGAGCACGAGAAGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000360578.7
3UTR-3UTR CCA 90 bp CTCTTCTCGTGCTCAGGGCCGGTTTCTGGTGTGCTCCCGATGCGCTTGGCTCTTCGGGCTAACAGGCTCTaGAAAAGTTTCCCCAGGACT +
Preference number: 2 (lower is better)
Translates to: LFSCSGPVSGVLPMRLALRANRL*KSFPRT
Trigger: AGTCCTGGGGAAACTTTTCCAGAGCCTGTTAGCCCG...AAGAGCCAAGCGCATCGGGAGCACACCAGAAACCGGCCCTGAGCACGAGAAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360578.7
3UTR-3UTR GCA 90 bp GCCACCCTGTTTGGTGACCACTCGTCCTCGGCCTTTTCAACACAAGGGCTTTGGAACGCCCCTTTGACCTaGAAACCACGTGCCCAGTGT +
Preference number: 2 (lower is better)
Translates to: ATLFGDHSSSAFSTQGLWNAPLT*KPRAQC
Trigger: ACACTGGGCACGTGGTTTGCAGGTCAAAGGGGCGTT...CCAAAGCCCTTGTGTTGAAAAGGCCGAGGACGAGTGGTCACCAAACAGGGTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360578.7
3UTR-3UTR GCA 90 bp CCTAAAGGAGCCACGAAGCCTGAGGTCCATTTTTCCTTGCTCTTTATTTCCAGGGTCCTGGATGGGCTCTaGTCAGCCCCCTGCTGGCAG +
Preference number: 2 (lower is better)
Translates to: PKGATKPEVHFSLLFISRVLDGL*SAPCWQ
Trigger: CTGCCAGCAGGGGGCTGAGCAGAGCCCATCCAGGAC...CCTGGAAATAAAGAGCAAGGAAAAATGGACCTCAGGCTTCGTGGCTCCTTTAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000360578.7
3UTR-3UTR GCA 90 bp CCTAAAGGAGCCACGAAGCCTGAGGTCCATTTTTCCTTGCTCTTTATTTCCAGGCCGCCCTGGGGCTTCTaGTCTGCTCAGGTAGGGGGA +
Preference number: 2 (lower is better)
Translates to: PKGATKPEVHFSLLFISRPPWGF*SAQVGG
Trigger: TCCCCCTACCTGAGCAGAGCAGAAGCCCCAGGGCGG...CCTGGAAATAAAGAGCAAGGAAAAATGGACCTCAGGCTTCGTGGCTCCTTTAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000360578.7
3UTR CAA 90 bp CACAGGAGCAGTGTGCACACAGACACGAGCTGTTTCACTACAGGTTaGCAAGCCAGGCTCAACAGCAAGTCCAACAGGCAACACCACACC +
Preference number: 2 (lower is better)
Translates to: HRSSVHTDTSCFTTG*QARLNSKSNRQHHT
Trigger: GGTGTGGTGTTGCCTGTTGGACTTGCTGTTGAGCCTGGCTTGCAAACCTGTAGTGAAACAGCTCGTGTCTGTGTGCACACTGCTCCTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360578.7
3UTR-3UTR CCA 90 bp AGATGCAATTACGGATTCCACAGACAAGTTGTAACTGACAGTGGTGACCACTATAGCACCCCCGCCAGGTaGCCTCACTCTGCCCTCTGC +
Preference number: 2 (lower is better)
Translates to: RCNYGFHRQVVTDSGDHYSTPAR*PHSALC
Trigger: GCAGAGGGCAGAGTGAGGCCACCTGGCGGGGGTGCT...ATAGTGGTCACCACTGTCAGTTACAACTTGTCTGTGGAATCCGTAATTGCATCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000360578.7
3UTR-3UTR CCA 90 bp AGATGCAATTACGGATTCCACAGACAAGTTGTAACTGACAGTGGTGACCACTATAGTGTGGAGGGAGAGTaGGGGCGTGGGGCCTCTCCC +
Preference number: 2 (lower is better)
Translates to: RCNYGFHRQVVTDSGDHYSVEGE*GRGASP
Trigger: GGGAGAGGCCCCACGCCCCCACTCTCCCTCCACACT...ATAGTGGTCACCACTGTCAGTTACAACTTGTCTGTGGAATCCGTAATTGCATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360578.7
3UTR-3UTR TCA 90 bp GGGCCAGTAGAGGGACAGGTAAGTGTCCAGGGCCAAGGCATCTCCATCTCAACTACAATATTCAGAAACTaGCTGAGGAAGATGCACGGG +
Preference number: 2 (lower is better)
Translates to: GPVEGQVSVQGQGISISTTIFRN*LRKMHG
Trigger: CCCGTGCATCTTCCTCAGTCAGTTTCTGAATATTGT...AGTTGAGATGGAGATGCCTTGGCCCTGGACACTTACCTGTCCCTCTACTGGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360578.7
3UTR-3UTR CCA 90 bp GTTGTTTTCAAATGTTTCCGCACGTTAGTTCTGCCTTTCACACGCGGTCCAGCCGTGTTAGTTGCCTGCTaGTTGGGGTTAGCTCCTGCC +
Preference number: 2 (lower is better)
Translates to: VVFKCFRTLVLPFTRGPAVLVAC*LGLAPA
Trigger: GGCAGGAGCTAACCCCAACCAGCAGGCAACTAACAC...GGCTGGACCGCGTGTGAAAGGCAGAACTAACGTGCGGAAACATTTGAAAACAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360578.7
3UTR-3UTR CCA 90 bp GGGCCAGTAGAGGGACAGGTAAGTGTCCAGGGCCAAGGCATCTCCATCTCAACTTCAACACAAGGGCTTTaGAGTTGTGATGGGCTGTTA +
Preference number: 2 (lower is better)
Translates to: GPVEGQVSVQGQGISISTSTQGL*SCDGLL
Trigger: TAACAGCCCATCACAACTCCAAAGCCCTTGTGTTGA...AGTTGAGATGGAGATGCCTTGGCCCTGGACACTTACCTGTCCCTCTACTGGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360578.7
3UTR CAA 90 bp AGGAGGAAAGATGCAGGTTCAGTGTTTGAAGGACGTTCTAGCCTATaGATAACATCACGGTCCAGCCTCATCTTCCCCCTGTGCCATCCC +
Preference number: 2 (lower is better)
Translates to: RRKDAGSVFEGRSSL*ITSRSSLIFPLCHP
Trigger: GGGATGGCACAGGGGGAAGATGAGGCTGGACCGTGATGTTATCAATAGGCTAGAACGTCCTTCAAACACTGAACCTGCATCTTTCCTCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000360578.7
3UTR-3UTR TCA 90 bp GTTGTTTTCAAATGTTTCCGCACGTTAGTTCTGCCTTTCACACGCGGTCCAGCCAGGAGCCACGAAGCCTaGGGTCCATTTTTCCTTGCT +
Preference number: 2 (lower is better)
Translates to: VVFKCFRTLVLPFTRGPARSHEA*GPFFLA
Trigger: AGCAAGGAAAAATGGACCTCAGGCTTCGTGGCTCCT...GGCTGGACCGCGTGTGAAAGGCAGAACTAACGTGCGGAAACATTTGAAAACAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360578.7
3UTR-3UTR GCA 90 bp GTTGTTTTCAAATGTTTCCGCACGTTAGTTCTGCCTTTCACACGCGGTCCAGCCTCGTTTTACCTAGGTTaGCCTTGGCACAGAGCTGGC +
Preference number: 2 (lower is better)
Translates to: VVFKCFRTLVLPFTRGPASFYLG*PWHRAG
Trigger: GCCAGCTCTGTGCCAAGGGCAACCTAGGTAAAACGA...GGCTGGACCGCGTGTGAAAGGCAGAACTAACGTGCGGAAACATTTGAAAACAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360578.7
3UTR-3UTR CCA 90 bp AGATGCAATTACGGATTCCACAGACAAGTTGTAACTGACAGTGGTGACCACTATCCTTCCACGGAGCTGTaGCCGCAGCAGGTGCACTCT +
Preference number: 2 (lower is better)
Translates to: RCNYGFHRQVVTDSGDHYPSTEL*PQQVHS
Trigger: AGAGTGCACCTGCTGCGGCCACAGCTCCGTGGAAGG...ATAGTGGTCACCACTGTCAGTTACAACTTGTCTGTGGAATCCGTAATTGCATCT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360578.7
3UTR-3UTR TCA 90 bp CCTAAAGGAGCCACGAAGCCTGAGGTCCATTTTTCCTTGCTCTTTATTTCCAGGCACTTTGGAAATGGCTaGGGACGAGGCAGGTGTATT +
Preference number: 2 (lower is better)
Translates to: PKGATKPEVHFSLLFISRHFGNG*GRGRCI
Trigger: AATACACCTGCCTCGTCCTCAGCCATTTCCAAAGTG...CCTGGAAATAAAGAGCAAGGAAAAATGGACCTCAGGCTTCGTGGCTCCTTTAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000360578.7
3UTR-3UTR GCA 90 bp GTTGTTTTCAAATGTTTCCGCACGTTAGTTCTGCCTTTCACACGCGGTCCAGCCAGGAATGTAATGAAGTaGGAGGTGACAGAGTCCCTG +
Preference number: 2 (lower is better)
Translates to: VVFKCFRTLVLPFTRGPARNVMK*EVTESL
Trigger: CAGGGACTCTGTCACCTCGCACTTCATTACATTCCT...GGCTGGACCGCGTGTGAAAGGCAGAACTAACGTGCGGAAACATTTGAAAACAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360578.7
3UTR-3UTR GCA 90 bp GGGCCAGTAGAGGGACAGGTAAGTGTCCAGGGCCAAGGCATCTCCATCTCAACTAAGAGAACACACACCTaGCTGAATTCACAATATTCA +
Preference number: 2 (lower is better)
Translates to: GPVEGQVSVQGQGISISTKRTHT*LNSQYS
Trigger: TGAATATTGTGAATTCAGGCAGGTGTGTGTTCTCTT...AGTTGAGATGGAGATGCCTTGGCCCTGGACACTTACCTGTCCCTCTACTGGCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360578.7
3UTR-3UTR CCA 90 bp AGATGCAATTACGGATTCCACAGACAAGTTGTAACTGACAGTGGTGACCACTATACTGGGGCCCAAACCTaGTTTGAGAGGGGAGTGCTG +
Preference number: 2 (lower is better)
Translates to: RCNYGFHRQVVTDSGDHYTGAQT*FERGVL
Trigger: CAGCACTCCCCTCTCAAACCAGGTTTGGGCCCCAGT...ATAGTGGTCACCACTGTCAGTTACAACTTGTCTGTGGAATCCGTAATTGCATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360578.7
3UTR-3UTR CCA 90 bp AGATGCAATTACGGATTCCACAGACAAGTTGTAACTGACAGTGGTGACCACTATCCCTTGGCACAGAGCTaGCCTGTAGGCATGTGTGCA +
Preference number: 2 (lower is better)
Translates to: RCNYGFHRQVVTDSGDHYPLAQS*PVGMCA
Trigger: TGCACACATGCCTACAGGCCAGCTCTGTGCCAAGGG...ATAGTGGTCACCACTGTCAGTTACAACTTGTCTGTGGAATCCGTAATTGCATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360578.7
3UTR CAA 90 bp CCACAGGACATGATGCCAGCCCAACTCCACCATCTGCGCCCAAACTaGGACAGGATATTAGAAGGTGTAAAAGTAGTCCAGTATAAATAT +
Preference number: 2 (lower is better)
Translates to: PQDMMPAQLHHLRPN*DRILEGVKVVQYKY
Trigger: ATATTTATACTGGACTACTTTTACACCTTCTAATATCCTGTCCAAGTTTGGGCGCAGATGGTGGAGTTGGGCTGGCATCATGTCCTGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360578.7
3UTR TCA 72 bp GTCGGTGCTGGCCGTGTGGGCGAGGTGACCCGTCGGTaGCAGGGCCTGCTCCCTGCGAGGTCGGGTGGTGCC +
Preference number: 3 (lower is better)
Translates to: VGAGRVGEVTRR*QGLLPARSGGA
Trigger: GGCACCACCCGACCTCGCAGGGAGCAGGCCCTGTCACCGACGGGTCACCTCGCCCACACGGCCAGCACCGAC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360578.7
3UTR GCA 72 bp ACCGGATCAGGGCCTGGCGAGCCTCTGTGCCTGCCGTaGGGTGTGAGGACCCGCGGACCCCAACCCGCCCTT +
Preference number: 3 (lower is better)
Translates to: TGSGPGEPLCLP*GVRTRGPQPAL
Trigger: AAGGGCGGGTTGGGGTCCGCGGGTCCTCACACCGCACGGCAGGCACAGAGGCTCGCCAGGCCCTGATCCGGT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360578.7
3UTR GCA 72 bp TCGGGTGGTGCCCGGGCCGGGCGGAGGCTCTTCTCGTaGTCAGGGCCGGTTTCTGGTGTGCTCCCGATGCGC +
Preference number: 3 (lower is better)
Translates to: SGGARAGRRLFS*SGPVSGVLPMR
Trigger: GCGCATCGGGAGCACACCAGAAACCGGCCCTGAGCACGAGAAGAGCCTCCGCCCGGCCCGGGCACCACCCGA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360578.7
3UTR GCA 72 bp TCCCCACAGACCGGATCAGGGCCTGGCGAGCCTCTGTaGCTGCCGTGCGGTGTGAGGACCCGCGGACCCCAA +
Preference number: 3 (lower is better)
Translates to: SPQTGSGPGEPL*LPCGVRTRGPQ
Trigger: TTGGGGTCCGCGGGTCCTCACACCGCACGGCAGGCACAGAGGCTCGCCAGGCCCTGATCCGGTCTGTGGGGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360578.7
3UTR TCA 72 bp TCCGGCCACTCCAGCCAGGTCTGGGAAGGGCTGTGGTaGGTCGGTGCTGGCCGTGTGGGCGAGGTGACCCGT +
Preference number: 3 (lower is better)
Translates to: SGHSSQVWEGLW*VGAGRVGEVTR
Trigger: ACGGGTCACCTCGCCCACACGGCCAGCACCGACTCACCACAGCCCTTCCCAGACCTGGCTGGAGTGGCCGGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360578.7
3UTR GCA 72 bp AGCAGGTGCACTCTTGGGAGTCGGGGAGGCGGGTGGTaGTCATGCGTGCCAGTGAGGGAGGGGCCTCGCCAC +
Preference number: 3 (lower is better)
Translates to: SRCTLGSRGGGW*SCVPVREGPRH
Trigger: GTGGCGAGGCCCCTCCCTCACTGGCACGCATGAGCACCACCCGCCTCCCCGACTCCCAAGAGTGCACCTGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360578.7
3UTR CCA 72 bp CAGCCAGGTCTGGGAAGGGCTGTGGTGAGTCGGTGCTaGCCGTGTGGGCGAGGTGACCCGTCGGTGACAGGG +
Preference number: 3 (lower is better)
Translates to: QPGLGRAVVSRC*PCGRGDPSVTG
Trigger: CCCTGTCACCGACGGGTCACCTCGCCCACACGGCCAGCACCGACTCACCACAGCCCTTCCCAGACCTGGCTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360578.7
3UTR-3UTR CAA 90 bp GTGAGGACCCGCGGACCCCAACCCGCCCTTCCCTCCGTCCTGACCCGGCGCCAGGATCCGCGAGACACTTaGGAAATGGCTGAGGACGAG +
Preference number: 3 (lower is better)
Translates to: VRTRGPQPALPSVLTRRQDPRDT*EMAEDE
Trigger: CTCGTCCTCAGCCATTTCCAAAGTGTCTCGCGGATC...CTGGCGCCGGGTCAGGACGGAGGGAAGGGCGGGTTGGGGTCCGCGGGTCCTCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360578.7
3UTR GCA 72 bp CTCCAGCCAGGTCTGGGAAGGGCTGTGGTGAGTCGGTaGTGGCCGTGTGGGCGAGGTGACCCGTCGGTGACA +
Preference number: 3 (lower is better)
Translates to: LQPGLGRAVVSR*WPCGRGDPSVT
Trigger: TGTCACCGACGGGTCACCTCGCCCACACGGCCAGCACCGACTCACCACAGCCCTTCCCAGACCTGGCTGGAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360578.7
3UTR CCA 72 bp GGTGCCAGGGCCTTCCGGGTCTCAGGCTTCGGGACCTaGGGAGCCACCCTGTTTGGTGACCACTCGTCCTCG +
Preference number: 3 (lower is better)
Translates to: GARAFRVSGFGT*GATLFGDHSSS
Trigger: CGAGGACGAGTGGTCACCAAACAGGGTGGCTCCCCAGGTCCCGAAGCCTGAGACCCGGAAGGCCCTGGCACC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360578.7
3UTR CCA 72 bp TCAGTGTCCCTCGTCCCCACAGACCGGATCAGGGCCTaGCGAGCCTCTGTGCCTGCCGTGCGGTGTGAGGAC +
Preference number: 3 (lower is better)
Translates to: SVSLVPTDRIRA*RASVPAVRCED
Trigger: GTCCTCACACCGCACGGCAGGCACAGAGGCTCGCCAGGCCCTGATCCGGTCTGTGGGGACGAGGGACACTGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360578.7
3UTR CCA 72 bp CTGAGGGCCGCTGGGGGAGGGCGTGCCTCTAACTCGTaGGCACCAACCCTGGAAGTGTGGAGGGAGAGTGGG +
Preference number: 3 (lower is better)
Translates to: LRAAGGGRASNS*APTLEVWRESG
Trigger: CCCACTCTCCCTCCACACTTCCAGGGTTGGTGCCCACGAGTTAGAGGCACGCCCTCCCCCAGCGGCCCTCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000360578.7
3UTR TCA 72 bp CGAACGGGAGGGCCGGGCAGAGGCTCTGTCACGCGGTaGGGCGAGGAGTGTCTCGGCACTTCGTGTCTCTTG +
Preference number: 3 (lower is better)
Translates to: RTGGPGRGSVTR*GEECLGTSCLL
Trigger: CAAGAGACACGAAGTGCCGAGACACTCCTCGCCTCACCGCGTGACAGAGCCTCTGCCCGGCCCTCCCGTTCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360578.7
3UTR TCA 72 bp GTGTGCGTGCCAAGGGACAGTGGCAGTGTGCCATTGTaGCAGCGGGTGGCCACACCCGTCAGCCTCCCCAGG +
Preference number: 3 (lower is better)
Translates to: VCVPRDSGSVPL*QRVATPVSLPR
Trigger: CCTGGGGAGGCTGACGGGTGTGGCCACCCGCTGTCACAATGGCACACTGCCACTGTCCCTTGGCACGCACAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360578.7
3UTR TCA 72 bp GAGTGGAGAAGGGTGCTCTCCTGGCTCCCGCATGTCTaGGAAAAGCCTGAGGGCCGCTGGGGGAGGGCGTGC +
Preference number: 3 (lower is better)
Translates to: EWRRVLSWLPHV*EKPEGRWGRAC
Trigger: GCACGCCCTCCCCCAGCGGCCCTCAGGCTTTTCTCAGACATGCGGGAGCCAGGAGAGCACCCTTCTCCACTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360578.7
3UTR GCA 72 bp GCTGTGGGGTGGGAGGGTGGCCAGTGCACGCGTGATTaGCCACAGGAGGAGATGAGCTGGGCCAGTAGAGGG +
Preference number: 3 (lower is better)
Translates to: AVGWEGGQCTRD*PQEEMSWASRG
Trigger: CCCTCTACTGGCCCAGCTCATCTCCTCCTGTGGGCAATCACGCGTGCACTGGCCACCCTCCCACCCCACAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360578.7
3UTR CCA 72 bp GGCCTCGGGCCCCACAGACACCTCCCACGTCCGGTGTaGGGCCAATTCCGTGTTAGTTGCCTGCTGGTTGGG +
Preference number: 3 (lower is better)
Translates to: GLGPHRHLPRPV*GQFRVSCLLVG
Trigger: CCCAACCAGCAGGCAACTAACACGGAATTGGCCCCACACCGGACGTGGGAGGTGTCTGTGGGGCCCGAGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360578.7
3UTR CCA 72 bp AGCGAGCCTACTCTACCCTCACAGTCCAAGCCACTGTaGTCAGCCGGGAAGCCGCCCACTGCCCCTGACGGC +
Preference number: 3 (lower is better)
Translates to: SEPTLPSQSKPL*SAGKPPTAPDG
Trigger: GCCGTCAGGGGCAGTGGGCGGCTTCCCGGCTGACCACAGTGGCTTGGACTGTGAGGGTAGAGTAGGCTCGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360578.7
3UTR CCA 72 bp CTGCTGGCAGAGAAACCCCCACAGACACTGCAGGACTaGGGGTCCTCCCTAGTGTCCTGCTCTCCGGCGGGG +
Preference number: 3 (lower is better)
Translates to: LLAEKPPQTLQD*GSSLVSCSPAG
Trigger: CCCCGCCGGAGAGCAGGACACTAGGGAGGACCCCCAGTCCTGCAGTGTCTGTGGGGGTTTCTCTGCCAGCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360578.7
3UTR CCA 72 bp TTCTCCCCAGGTGCAGACAGGCAAGGGCGGGCCGCCTaGGTGTGTCCTGGCAGTGTGGAGTGTCCTGGATGG +
Preference number: 3 (lower is better)
Translates to: FSPGADRQGRAA*VCPGSVECPGW
Trigger: CCATCCAGGACACTCCACACTGCCAGGACACACCCAGGCGGCCCGCCCTTGCCTGTCTGCACCTGGGGAGAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360578.7
3UTR CCA 72 bp CAAGGGACAGTGGCAGTGTGCCATTGTGACAGCGGGTaGCCACACCCGTCAGCCTCCCCAGGAGGGAGCAGG +
Preference number: 3 (lower is better)
Translates to: QGTVAVCHCDSG*PHPSASPGGSR
Trigger: CCTGCTCCCTCCTGGGGAGGCTGACGGGTGTGGCCACCCGCTGTCACAATGGCACACTGCCACTGTCCCTTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360578.7
3UTR GCA 72 bp CTGTGGCTGTGTGCGTGCCAAGGGACAGTGGCAGTGTaGCATTGTGACAGCGGGTGGCCACACCCGTCAGCC +
Preference number: 3 (lower is better)
Translates to: LWLCACQGTVAV*HCDSGWPHPSA
Trigger: GGCTGACGGGTGTGGCCACCCGCTGTCACAATGGCACACTGCCACTGTCCCTTGGCACGCACACAGCCACAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360578.7
3UTR-3UTR CAA 90 bp CTCGTCCCCACAGACCGGATCAGGGCCTGGCGAGCCTCTGTGCCTGCCGTGCGGTTCGTTTTACCTAGGTaGCCCTTGGCACAGAGCTGG +
Preference number: 3 (lower is better)
Translates to: LVPTDRIRAWRASVPAVRFVLPR*PLAQSW
Trigger: CCAGCTCTGTGCCAAGGGCAACCTAGGTAAAACGAA...CCGCACGGCAGGCACAGAGGCTCGCCAGGCCCTGATCCGGTCTGTGGGGACGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360578.7
3UTR TCA 72 bp GCCACTGTGGTCAGCCGGGAAGCCGCCCACTGCCCCTaGCGGCTTTCGTTTTACCTAGGTTGCCCTTGGCAC +
Preference number: 3 (lower is better)
Translates to: ATVVSREAAHCP*RLSFYLGCPWH
Trigger: GTGCCAAGGGCAACCTAGGTAAAACGAAAGCCGTCAGGGGCAGTGGGCGGCTTCCCGGCTGACCACAGTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360578.7
3UTR GCA 72 bp GTGCTCCCGATGCGCTTGGCTCTTTTCTCGAGGCCGTaGTTGTCTGAGGCCAACCAGGGACCAGGAGGCAGC +
Preference number: 3 (lower is better)
Translates to: VLPMRLALFSRP*LSEANQGPGGS
Trigger: GCTGCCTCCTGGTCCCTGGTTGGCCTCAGACAAGCACGGCCTCGAGAAAAGAGCCAAGCGCATCGGGAGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360578.7
3UTR GCA 72 bp ACAGCAAGTCCAACAGGCAACACCACACCTCTCACCTaGAGGAGGAACAGCAGGGCCACCCCACCCCGCGGA +
Preference number: 3 (lower is better)
Translates to: TASPTGNTTPLT*RRNSRATPPRG
Trigger: TCCGCGGGGTGGGGTGGCCCTGCTGTTCCTCCTGCAGGTGAGAGGTGTGGTGTTGCCTGTTGGACTTGCTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360578.7
3UTR CCA 72 bp ACGTGTGGCTGTGGCTGTGTGCGTGCCAAGGGACAGTaGCAGTGTGCCATTGTGACAGCGGGTGGCCACACC +
Preference number: 3 (lower is better)
Translates to: TCGCGCVRAKGQ*QCAIVTAGGHT
Trigger: GGTGTGGCCACCCGCTGTCACAATGGCACACTGCCACTGTCCCTTGGCACGCACACAGCCACAGCCACACGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360578.7
3UTR CCA 72 bp CGGGCGGAGGCTCTTCTCGTGCTCAGGGCCGGTTTCTaGTGTGCTCCCGATGCGCTTGGCTCTTTTCTCGAG +
Preference number: 3 (lower is better)
Translates to: RAEALLVLRAGF*CAPDALGSFLE
Trigger: CTCGAGAAAAGAGCCAAGCGCATCGGGAGCACACCAGAAACCGGCCCTGAGCACGAGAAGAGCCTCCGCCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360578.7
3UTR-3UTR CAA 90 bp CAGGGCCGGTTTCTGGTGTGCTCCCGATGCGCTTGGCTCTTTTCTCGAGGCCGTGGCACTTCGTGTCTCTaGCCTGGCAACACCACAGGG +
Preference number: 3 (lower is better)
Translates to: QGRFLVCSRCAWLFSRGRGTSCL*PGNTTG
Trigger: CCCTGTGGTGTTGCCAGGCAAGAGACACGAAGTGCC...ACGGCCTCGAGAAAAGAGCCAAGCGCATCGGGAGCACACCAGAAACCGGCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360578.7
3UTR TCA 72 bp GATGCGCTTGGCTCTTTTCTCGAGGCCGTGCTTGTCTaGGGCCAACCAGGGACCAGGAGGCAGCGTCCTGGT +
Preference number: 3 (lower is better)
Translates to: DALGSFLEAVLV*GQPGTRRQRPG
Trigger: ACCAGGACGCTGCCTCCTGGTCCCTGGTTGGCCTCAGACAAGCACGGCCTCGAGAAAAGAGCCAAGCGCATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360578.7
3UTR GCA 72 bp GTGTGGAGTGTCCTGGATGGGCTCTGCTCAGCCCCCTaGTGGCAGAGAAACCCCCACAGACACTGCAGGACT +
Preference number: 3 (lower is better)
Translates to: VWSVLDGLCSAP*WQRNPHRHCRT
Trigger: AGTCCTGCAGTGTCTGTGGGGGTTTCTCTGCCAGCAGGGGGCTGAGCAGAGCCCATCCAGGACACTCCACAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000360578.7
3UTR GCA 72 bp TGTGTCCTGGCAGTGTGGAGTGTCCTGGATGGGCTCTaGTCAGCCCCCTGCTGGCAGAGAAACCCCCACAGA +
Preference number: 3 (lower is better)
Translates to: CVLAVWSVLDGL*SAPCWQRNPHR
Trigger: TCTGTGGGGGTTTCTCTGCCAGCAGGGGGCTGAGCAGAGCCCATCCAGGACACTCCACACTGCCAGGACACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000360578.7
3UTR GCA 72 bp GGAGGCTCTTCTCGTGCTCAGGGCCGGTTTCTGGTGTaGTCCCGATGCGCTTGGCTCTTTTCTCGAGGCCGT +
Preference number: 3 (lower is better)
Translates to: GGSSRAQGRFLV*SRCAWLFSRGR
Trigger: ACGGCCTCGAGAAAAGAGCCAAGCGCATCGGGAGCACACCAGAAACCGGCCCTGAGCACGAGAAGAGCCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360578.7
3UTR CCA 72 bp GTTCGTTCTGCGTGGCTTGGCCGTGACTGTGGGGACTaGGCTGCCCACGGACAGAAAGGAGAAACGCAGCCT +
Preference number: 3 (lower is better)
Translates to: VRSAWLGRDCGD*AAHGQKGETQP
Trigger: AGGCTGCGTTTCTCCTTTCTGTCCGTGGGCAGCCCAGTCCCCACAGTCACGGCCAAGCCACGCAGAACGAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360578.7
3UTR CCA 72 bp GCTCAGGGCCGGTTTCTGGTGTGCTCCCGATGCGCTTaGCTCTTTTCTCGAGGCCGTGCTTGTCTGAGGCCA +
Preference number: 3 (lower is better)
Translates to: AQGRFLVCSRCA*LFSRGRACLRP
Trigger: TGGCCTCAGACAAGCACGGCCTCGAGAAAAGAGCCAAGCGCATCGGGAGCACACCAGAAACCGGCCCTGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360578.7
3UTR TCA 72 bp CTCAGGCTTCGGGACCTGGGGAGCCACCCTGTTTGGTaGCCACTCGTCCTCGGCCTTTTCAACACAAGGGCT +
Preference number: 3 (lower is better)
Translates to: LRLRDLGSHPVW*PLVLGLFNTRA
Trigger: AGCCCTTGTGTTGAAAAGGCCGAGGACGAGTGGTCACCAAACAGGGTGGCTCCCCAGGTCCCGAAGCCTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360578.7
3UTR GCA 72 bp TCTCGTGCTCAGGGCCGGTTTCTGGTGTGCTCCCGATaGGCTTGGCTCTTTTCTCGAGGCCGTGCTTGTCTG +
Preference number: 3 (lower is better)
Translates to: SRAQGRFLVCSR*AWLFSRGRACL
Trigger: CAGACAAGCACGGCCTCGAGAAAAGAGCCAAGCGCATCGGGAGCACACCAGAAACCGGCCCTGAGCACGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360578.7
3UTR GCA 72 bp CCCAGGACTCCCCATCACATGCCCAGGGACAAACGCTaGACCCTGGACCACCAGAGCTCACAAAGTGTTCAG +
Preference number: 3 (lower is better)
Translates to: PRTPHHMPRDKR*TLDHQSSQSVQ
Trigger: CTGAACACTTTGTGAGCTCTGGTGGTCCAGGGTGCAGCGTTTGTCCCTGGGCATGTGATGGGGAGTCCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360578.7
3UTR GCA 72 bp GGTGAGGCGAGGAGTGTCTCGGCACTTCGTGTCTCTTaGCTGGCAACACCACAGGGACCGGACATTCTGAAT +
Preference number: 3 (lower is better)
Translates to: GEARSVSALRVS*LATPQGPDILN
Trigger: ATTCAGAATGTCCGGTCCCTGTGGTGTTGCCAGGCAAGAGACACGAAGTGCCGAGACACTCCTCGCCTCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360578.7
3UTR-3UTR CAA 90 bp GCCACCCTGTTTGGTGACCACTCGTCCTCGGCCTTTTCAACACAAGGGCTTTGGTTACCTAGGTTGCCCTaGGCACAGAGCTGGCCTGTA +
Preference number: 3 (lower is better)
Translates to: ATLFGDHSSSAFSTQGLWLPRLP*AQSWPV
Trigger: TACAGGCCAGCTCTGTGCCAAGGGCAACCTAGGTAA...CCAAAGCCCTTGTGTTGAAAAGGCCGAGGACGAGTGGTCACCAAACAGGGTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360578.7
3UTR GCA 72 bp GAGGAAGATGCACGGGTCTGTTATGTGCAGTGGGGCTaGCGTCCAAACAATGTTCTGTGTTCGGAGGCGGCA +
Preference number: 3 (lower is better)
Translates to: EEDARVCYVQWG*RPNNVLCSEAA
Trigger: TGCCGCCTCCGAACACAGAACATTGTTTGGACGGCAGCCCCACTGCACATAACAGACCCGTGCATCTTCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360578.7
3UTR CCA 72 bp CAGCAGCCTCGATCTCATTCACGAAACCCACAGGCGTaGCCTAGGGTTTGGGATGCACGCCACGATTTTCTC +
Preference number: 3 (lower is better)
Translates to: QQPRSHSRNPQA*PRVWDARHDFL
Trigger: GAGAAAATCGTGGCGTGCATCCCAAACCCTAGGCCACGCCTGTGGGTTTCGTGAATGAGATCGAGGCTGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360578.7
3UTR CCA 72 bp AAACGCCCCTTTGACCTGCAAACCACGTGCCCAGTGTaGTGTGATCCGCGAGACACTTTGGAAATGGCTGAG +
Preference number: 3 (lower is better)
Translates to: KRPFDLQTTCPV*CDPRDTLEMAE
Trigger: CTCAGCCATTTCCAAAGTGTCTCGCGGATCACACCACACTGGGCACGTGGTTTGCAGGTCAAAGGGGCGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360578.7
3UTR CCA 72 bp CTCCCCATCACATGCCCAGGGACAAACGCTGCACCCTaGACCACCAGAGCTCACAAAGTGTTCAGTAGTAAG +
Preference number: 3 (lower is better)
Translates to: LPITCPGTNAAP*TTRAHKVFSSK
Trigger: CTTACTACTGAACACTTTGTGAGCTCTGGTGGTCCAGGGTGCAGCGTTTGTCCCTGGGCATGTGATGGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360578.7
3UTR GCA 72 bp GCTGCTTTAAAACGCCCCTTTGACCTGCAAACCACGTaGCCAGTGTGGTGTGATCCGCGAGACACTTTGGAA +
Preference number: 3 (lower is better)
Translates to: AALKRPFDLQTT*PVWCDPRDTLE
Trigger: TTCCAAAGTGTCTCGCGGATCACACCACACTGGGCACGTGGTTTGCAGGTCAAAGGGGCGTTTTAAAGCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360578.7
3UTR CCA 72 bp GACCACTCGTCCTCGGCCTTTTCAACACAAGGGCTTTaGAGTTGTGATGGGCTGTTATCGGGTGATTCCGGT +
Preference number: 3 (lower is better)
Translates to: DHSSSAFSTQGL*SCDGLLSGDSG
Trigger: ACCGGAATCACCCGATAACAGCCCATCACAACTCCAAAGCCCTTGTGTTGAAAAGGCCGAGGACGAGTGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360578.7
3UTR CCA 72 bp CTGACTGAGGAAGATGCACGGGTCTGTTATGTGCAGTaGGGCTGCCGTCCAAACAATGTTCTGTGTTCGGAG +
Preference number: 3 (lower is better)
Translates to: LTEEDARVCYVQ*GCRPNNVLCSE
Trigger: CTCCGAACACAGAACATTGTTTGGACGGCAGCCCCACTGCACATAACAGACCCGTGCATCTTCCTCAGTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360578.7
3UTR-3UTR CAA 90 bp GGGCCAGTAGAGGGACAGGTAAGTGTCCAGGGCCAAGGCATCTCCATCTCAACTCATCTGCGCCCAAACTaGGACAGGATATTAGAAGGT +
Preference number: 3 (lower is better)
Translates to: GPVEGQVSVQGQGISISTHLRPN*DRILEG
Trigger: ACCTTCTAATATCCTGTCCAAGTTTGGGCGCAGATG...AGTTGAGATGGAGATGCCTTGGCCCTGGACACTTACCTGTCCCTCTACTGGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360578.7
3UTR GCA 72 bp TTTCAAAGATTCGCTTTGGAGCTGAGTGGAGAAGGGTaGTCTCCTGGCTCCCGCATGTCTGAGAAAAGCCTG +
Preference number: 3 (lower is better)
Translates to: FQRFALELSGEG*SPGSRMSEKSL
Trigger: CAGGCTTTTCTCAGACATGCGGGAGCCAGGAGAGCACCCTTCTCCACTCAGCTCCAAAGCGAATCTTTGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360578.7
3UTR GCA 72 bp GTGTGCACACAGACACGAGCTGTTTCACTACAGGTTTaGAAGCCAGGCTCAACAGCAAGTCCAACAGGCAAC +
Preference number: 3 (lower is better)
Translates to: VCTQTRAVSLQV*KPGSTASPTGN
Trigger: GTTGCCTGTTGGACTTGCTGTTGAGCCTGGCTTGCAAACCTGTAGTGAAACAGCTCGTGTCTGTGTGCACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360578.7
3UTR CCA 72 bp TCTCATTCACGAAACCCACAGGCGTGGCCTAGGGTTTaGGATGCACGCCACGATTTTCTCTCTCAGAGTGAA +
Preference number: 3 (lower is better)
Translates to: SHSRNPQAWPRV*DARHDFLSQSE
Trigger: TTCACTCTGAGAGAGAAAATCGTGGCGTGCATCCCAAACCCTAGGCCACGCCTGTGGGTTTCGTGAATGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360578.7
3UTR-3UTR CAA 90 bp AGATGCAATTACGGATTCCACAGACAAGTTGTAACTGACAGTGGTGACCACTATGTGCTCCCGATGCGCTaGGCTCTTTTCTCGAGGCCG +
Preference number: 3 (lower is better)
Translates to: RCNYGFHRQVVTDSGDHYVLPMR*ALFSRP
Trigger: CGGCCTCGAGAAAAGAGCCAAGCGCATCGGGAGCAC...ATAGTGGTCACCACTGTCAGTTACAACTTGTCTGTGGAATCCGTAATTGCATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360578.7
3UTR GCA 72 bp CACACAATGTTAACGACAGCAGACACAGGAGCAGTGTaGACACAGACACGAGCTGTTTCACTACAGGTTTGC +
Preference number: 3 (lower is better)
Translates to: HTMLTTADTGAV*TQTRAVSLQVC
Trigger: GCAAACCTGTAGTGAAACAGCTCGTGTCTGTGTGCACACTGCTCCTGTGTCTGCTGTCGTTAACATTGTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360578.7
3UTR TCA 72 bp GCCATGACGTGGACATCACCCGTCACACTGATAAAGTaGTGCACTCAGTACTCCCTAATGTTAATCACACAG +
Preference number: 3 (lower is better)
Translates to: AMTWTSPVTLIK*CTQYSLMLITQ
Trigger: CTGTGTGATTAACATTAGGGAGTACTGAGTGCATCACTTTATCAGTGTGACGGGTGATGTCCACGTCATGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360578.7
3UTR GCA 72 bp CCAAACAATGTTCTGTGTTCGGAGGCGGCACACAGATaGAATTACGGATTCCACAGACAAGTTGTAACTGAC +
Preference number: 3 (lower is better)
Translates to: PNNVLCSEAAHR*NYGFHRQVVTD
Trigger: GTCAGTTACAACTTGTCTGTGGAATCCGTAATTGCATCTGTGTGCCGCCTCCGAACACAGAACATTGTTTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360578.7
3UTR TCA 72 bp AACACACACCTGCCTGAATTCACAATATTCAGAAACTaGCTGAGGAAGATGCACGGGTCTGTTATGTGCAGT +
Preference number: 3 (lower is better)
Translates to: NTHLPEFTIFRN*LRKMHGSVMCS
Trigger: ACTGCACATAACAGACCCGTGCATCTTCCTCAGTCAGTTTCTGAATATTGTGAATTCAGGCAGGTGTGTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS-3UTR CCA 90 bp CTCGTCCCCACAGACCGGATCAGGGCCTGGCGAGCCTCTGTGCCTGCCGTGCGGAGGGTGGAGCCGCGCTaGGGCCAGGGAGGCCGAGGA +
Preference number: 4 (lower is better)
Translates to: LVPTDRIRAWRASVPAVRRVEPR*GQGGRG
Trigger: TCCTCGGCCTCCCTGGCCCCAGCGCGGCTCCACCCT...CCGCACGGCAGGCACAGAGGCTCGCCAGGCCCTGATCCGGTCTGTGGGGACGAG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS-3UTR TCA 90 bp GTGAGGACCCGCGGACCCCAACCCGCCCTTCCCTCCGTCCTGACCCGGCGCCAGGGCGGCCACAGGACATaGTGCCAGCCCAACTCCACC +
Preference number: 4 (lower is better)
Translates to: VRTRGPQPALPSVLTRRQGGHRT*CQPNST
Trigger: GGTGGAGTTGGGCTGGCATCATGTCCTGTGGCCGCC...CTGGCGCCGGGTCAGGACGGAGGGAAGGGCGGGTTGGGGTCCGCGGGTCCTCAC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS-3UTR GCA 90 bp GAGGACCCGCGGACCCCAACCCGCCCTTCCCTCCGTCCTGACCCGGCGCCAGGCGGCCGGTTTCTGGTGTaGTCCCGATGCGCTTGGCTC +
Preference number: 4 (lower is better)
Translates to: EDPRTPTRPSLRPDPAPGGRFLV*SRCAWL
Trigger: GAGCCAAGCGCATCGGGAGCACACCAGAAACCGGCC...GCCTGGCGCCGGGTCAGGACGGAGGGAAGGGCGGGTTGGGGTCCGCGGGTCCTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS-3UTR CCA 90 bp GTGAGGACCCGCGGACCCCAACCCGCCCTTCCCTCCGTCCTGACCCGGCGCCAGAGTCGGGGAGGCGGGTaGTGCTCATGCGTGCCAGTG +
Preference number: 4 (lower is better)
Translates to: VRTRGPQPALPSVLTRRQSRGGG*CSCVPV
Trigger: CACTGGCACGCATGAGCACCACCCGCCTCCCCGACT...CTGGCGCCGGGTCAGGACGGAGGGAAGGGCGGGTTGGGGTCCGCGGGTCCTCAC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS-3UTR CCA 90 bp TCGTCCCCACAGACCGGATCAGGGCCTGGCGAGCCTCTGTGCCTGCCGTGCGGTAGACGCAGCCCAGGGTaGAGCCGCGCTGGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: SSPQTGSGPGEPLCLPCGRRSPG*SRAGAR
Trigger: CCTGGCCCCAGCGCGGCTCCACCCTGGGCTGCGTCT...ACCGCACGGCAGGCACAGAGGCTCGCCAGGCCCTGATCCGGTCTGTGGGGACGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS-3UTR CCA 90 bp GCCGTGCGGTGTGAGGACCCGCGGACCCCAACCCGCCCTTCCCTCCGTCCTGACAGTGTGGAGGGAGAGTaGGGGCGTGGGGCCTCTCCC +
Preference number: 4 (lower is better)
Translates to: AVRCEDPRTPTRPSLRPDSVEGE*GRGASP
Trigger: GGGAGAGGCCCCACGCCCCCACTCTCCCTCCACACT...GTCAGGACGGAGGGAAGGGCGGGTTGGGGTCCGCGGGTCCTCACACCGCACGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS-3UTR TCA 90 bp TCGTCCCCACAGACCGGATCAGGGCCTGGCGAGCCTCTGTGCCTGCCGTGCGGTGCTCATGCGTGCCAGTaGGGGAGGGGCCTCGCCACC +
Preference number: 4 (lower is better)
Translates to: SSPQTGSGPGEPLCLPCGAHACQ*GRGLAT
Trigger: GGTGGCGAGGCCCCTCCCTCACTGGCACGCATGAGC...ACCGCACGGCAGGCACAGAGGCTCGCCAGGCCCTGATCCGGTCTGTGGGGACGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS-3UTR GCA 90 bp CTCGTCCCCACAGACCGGATCAGGGCCTGGCGAGCCTCTGTGCCTGCCGTGCGGGGCGGGTGGTGCTCATaGGTGCCAGTGAGGGAGGGG +
Preference number: 4 (lower is better)
Translates to: LVPTDRIRAWRASVPAVRGGWCS*VPVREG
Trigger: CCCCTCCCTCACTGGCACGCATGAGCACCACCCGCC...CCGCACGGCAGGCACAGAGGCTCGCCAGGCCCTGATCCGGTCTGTGGGGACGAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS-3UTR CCA 90 bp GTGAGGACCCGCGGACCCCAACCCGCCCTTCCCTCCGTCCTGACCCGGCGCCAGCACGCAGGGCTGCTGTaGTCAGCCCTGAGCTGGCAT +
Preference number: 4 (lower is better)
Translates to: VRTRGPQPALPSVLTRRQHAGLL*SALSWH
Trigger: ATGCCAGCTCAGGGCTGACCACAGCAGCCCTGCGTG...CTGGCGCCGGGTCAGGACGGAGGGAAGGGCGGGTTGGGGTCCGCGGGTCCTCAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS-3UTR GCA 90 bp CTCGTCCCCACAGACCGGATCAGGGCCTGGCGAGCCTCTGTGCCTGCCGTGCGGGTCCTGGATGGGCTCTaGTCAGCCCCCTGCTGGCAG +
Preference number: 4 (lower is better)
Translates to: LVPTDRIRAWRASVPAVRVLDGL*SAPCWQ
Trigger: CTGCCAGCAGGGGGCTGAGCAGAGCCCATCCAGGAC...CCGCACGGCAGGCACAGAGGCTCGCCAGGCCCTGATCCGGTCTGTGGGGACGAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS-3UTR GCA 90 bp GTGAGGACCCGCGGACCCCAACCCGCCCTTCCCTCCGTCCTGACCCGGCGCCAGCTGTGGGGACTGGGCTaGCCACGGACAGAAAGGAGA +
Preference number: 4 (lower is better)
Translates to: VRTRGPQPALPSVLTRRQLWGLG*PRTERR
Trigger: TCTCCTTTCTGTCCGTGGGCAGCCCAGTCCCCACAG...CTGGCGCCGGGTCAGGACGGAGGGAAGGGCGGGTTGGGGTCCGCGGGTCCTCAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS-3UTR GCA 90 bp CTCGTCCCCACAGACCGGATCAGGGCCTGGCGAGCCTCTGTGCCTGCCGTGCGGCCAGGACGGGCAGGGTaGCACAGCAGCCTCGATCTC +
Preference number: 4 (lower is better)
Translates to: LVPTDRIRAWRASVPAVRPGRAG*HSSLDL
Trigger: GAGATCGAGGCTGCTGTGGCACCCTGCCCGTCCTGG...CCGCACGGCAGGCACAGAGGCTCGCCAGGCCCTGATCCGGTCTGTGGGGACGAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS-3UTR CCA 90 bp GAGGACCCGCGGACCCCAACCCGCCCTTCCCTCCGTCCTGACCCGGCGCCAGGCCCCTTGGCACAGAGCTaGCCTGTAGGCATGTGTGCA +
Preference number: 4 (lower is better)
Translates to: EDPRTPTRPSLRPDPAPGPLAQS*PVGMCA
Trigger: TGCACACATGCCTACAGGCCAGCTCTGTGCCAAGGG...GCCTGGCGCCGGGTCAGGACGGAGGGAAGGGCGGGTTGGGGTCCGCGGGTCCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS-3UTR CCA 90 bp GAGGACCCGCGGACCCCAACCCGCCCTTCCCTCCGTCCTGACCCGGCGCCAGGCTGTGTCCTGGCAGTGTaGAGTGTCCTGGATGGGCTC +
Preference number: 4 (lower is better)
Translates to: EDPRTPTRPSLRPDPAPGCVLAV*SVLDGL
Trigger: GAGCCCATCCAGGACACTCCACACTGCCAGGACACA...GCCTGGCGCCGGGTCAGGACGGAGGGAAGGGCGGGTTGGGGTCCGCGGGTCCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS-3UTR CCA 90 bp GTGAGGACCCGCGGACCCCAACCCGCCCTTCCCTCCGTCCTGACCCGGCGCCAGCTCAGGGCCGGTTTCTaGTGTGCTCCCGATGCGCTT +
Preference number: 4 (lower is better)
Translates to: VRTRGPQPALPSVLTRRQLRAGF*CAPDAL
Trigger: AAGCGCATCGGGAGCACACCAGAAACCGGCCCTGAG...CTGGCGCCGGGTCAGGACGGAGGGAAGGGCGGGTTGGGGTCCGCGGGTCCTCAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS-3UTR CCA 90 bp GCCGTGCGGTGTGAGGACCCGCGGACCCCAACCCGCCCTTCCCTCCGTCCTGACCCAACCCTGGAAGTGTaGAGGGAGAGTGGGGGCGTG +
Preference number: 4 (lower is better)
Translates to: AVRCEDPRTPTRPSLRPDPTLEV*RESGGV
Trigger: CACGCCCCCACTCTCCCTCCACACTTCCAGGGTTGG...GTCAGGACGGAGGGAAGGGCGGGTTGGGGTCCGCGGGTCCTCACACCGCACGGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS-3UTR TCA 90 bp GCCGTGCGGTGTGAGGACCCGCGGACCCCAACCCGCCCTTCCCTCCGTCCTGACCGATGTCCACGTCAGTaGCGGTCACGTTCCTGCCGT +
Preference number: 4 (lower is better)
Translates to: AVRCEDPRTPTRPSLRPDRCPRQ*RSRSCR
Trigger: ACGGCAGGAACGTGACCGTCACTGACGTGGACATCG...GTCAGGACGGAGGGAAGGGCGGGTTGGGGTCCGCGGGTCCTCACACCGCACGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS-3UTR GCA 90 bp TCGTCCCCACAGACCGGATCAGGGCCTGGCGAGCCTCTGTGCCTGCCGTGCGGTCCCTCGATGAGCCTGTaGACCTCGCGAACGGCCTCC +
Preference number: 4 (lower is better)
Translates to: SSPQTGSGPGEPLCLPCGPSMSL*TSRTAS
Trigger: GGAGGCCGTTCGCGAGGTGCACAGGCTCATCGAGGG...ACCGCACGGCAGGCACAGAGGCTCGCCAGGCCCTGATCCGGTCTGTGGGGACGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS-3UTR GCA 90 bp TCGTCCCCACAGACCGGATCAGGGCCTGGCGAGCCTCTGTGCCTGCCGTGCGGTGGCCAGCCTTGCCCTTaGCCTTGCCAGAGGGGTCGA +
Preference number: 4 (lower is better)
Translates to: SSPQTGSGPGEPLCLPCGGQPCP*PCQRGR
Trigger: TCGACCCCTCTGGCAAGGGCAAGGGCAAGGCTGGCC...ACCGCACGGCAGGCACAGAGGCTCGCCAGGCCCTGATCCGGTCTGTGGGGACGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS-3UTR GCA 90 bp GCCGTGCGGTGTGAGGACCCGCGGACCCCAACCCGCCCTTCCCTCCGTCCTGACCTCCTGGAAGGTGTCTaGCGCTCAGGAGGTCAGCAC +
Preference number: 4 (lower is better)
Translates to: AVRCEDPRTPTRPSLRPDLLEGV*RSGGQH
Trigger: GTGCTGACCTCCTGAGCGGCAGACACCTTCCAGGAG...GTCAGGACGGAGGGAAGGGCGGGTTGGGGTCCGCGGGTCCTCACACCGCACGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS-3UTR GCA 90 bp CTCGTCCCCACAGACCGGATCAGGGCCTGGCGAGCCTCTGTGCCTGCCGTGCGGTGTGGCCGCAGCAGGTaGACTCTTGGGAGTCGGGGA +
Preference number: 4 (lower is better)
Translates to: LVPTDRIRAWRASVPAVRCGRSR*TLGSRG
Trigger: TCCCCGACTCCCAAGAGTGCACCTGCTGCGGCCACA...CCGCACGGCAGGCACAGAGGCTCGCCAGGCCCTGATCCGGTCTGTGGGGACGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS-3UTR CCA 90 bp GTGAGGACCCGCGGACCCCAACCCGCCCTTCCCTCCGTCCTGACCCGGCGCCAGCTGTGGGCGACGAGATaGCTTTCGTCACCCCTGAGA +
Preference number: 4 (lower is better)
Translates to: VRTRGPQPALPSVLTRRQLWATR*LSSPLR
Trigger: TCTCAGGGGTGACGAAAGCCATCTCGTCGCCCACAG...CTGGCGCCGGGTCAGGACGGAGGGAAGGGCGGGTTGGGGTCCGCGGGTCCTCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS-3UTR CCA 90 bp GCCGTGCGGTGTGAGGACCCGCGGACCCCAACCCGCCCTTCCCTCCGTCCTGACTTGAGAGGGGAGTGCTaGGGGCATCCGGTAGGAGGA +
Preference number: 4 (lower is better)
Translates to: AVRCEDPRTPTRPSLRPDLRGEC*GHPVGG
Trigger: TCCTCCTACCGGATGCCCCCAGCACTCCCCTCTCAA...GTCAGGACGGAGGGAAGGGCGGGTTGGGGTCCGCGGGTCCTCACACCGCACGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS-3UTR TCA 90 bp TTTTCTCGAGGCCGTGCTTGTCTGAGGCCAACCAGGGACCAGGAGGCAGCGTCCGCCTGCCGTGCGGTGTaGGGACCCGCGGACCCCAAC +
Preference number: 4 (lower is better)
Translates to: FSRGRACLRPTRDQEAASACRAV*GPADPN
Trigger: GTTGGGGTCCGCGGGTCCTCACACCGCACGGCAGGC...GGACGCTGCCTCCTGGTCCCTGGTTGGCCTCAGACAAGCACGGCCTCGAGAAAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS-3UTR TCA 90 bp TGGGTGTGTCCTGGCAGTGTGGAGTGTCCTGGATGGGCTCTGCTCAGCCCCCTGGAGGTGACCCGTCGGTaGCAGGGCCTGCTCCCTGCG +
Preference number: 4 (lower is better)
Translates to: WVCPGSVECPGWALLSPLEVTRR*QGLLPA
Trigger: CGCAGGGAGCAGGCCCTGTCACCGACGGGTCACCTC...CAGGGGGCTGAGCAGAGCCCATCCAGGACACTCCACACTGCCAGGACACACCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS-3UTR GCA 90 bp GTGAGGACCCGCGGACCCCAACCCGCCCTTCCCTCCGTCCTGACCCGGCGCCAGCTGGTGTGCTCCCGATaGGCTTGGCTCTTTTCTCGA +
Preference number: 4 (lower is better)
Translates to: VRTRGPQPALPSVLTRRQLVCSR*AWLFSR
Trigger: TCGAGAAAAGAGCCAAGCGCATCGGGAGCACACCAG...CTGGCGCCGGGTCAGGACGGAGGGAAGGGCGGGTTGGGGTCCGCGGGTCCTCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS-3UTR GCA 90 bp GAGGACCCGCGGACCCCAACCCGCCCTTCCCTCCGTCCTGACCCGGCGCCAGGCGACACAGGAGCAGTGTaGACACAGACACGAGCTGTT +
Preference number: 4 (lower is better)
Translates to: EDPRTPTRPSLRPDPAPGDTGAV*TQTRAV
Trigger: AACAGCTCGTGTCTGTGTGCACACTGCTCCTGTGTC...GCCTGGCGCCGGGTCAGGACGGAGGGAAGGGCGGGTTGGGGTCCGCGGGTCCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS-3UTR CCA 90 bp TTTTCTCGAGGCCGTGCTTGTCTGAGGCCAACCAGGGACCAGGAGGCAGCGTCCCCCTCCCGGTGGCCCTaGCGTCCCCGTGCACGGCAA +
Preference number: 4 (lower is better)
Translates to: FSRGRACLRPTRDQEAASPSRWP*RPRARQ
Trigger: TTGCCGTGCACGGGGACGCCAGGGCCACCGGGAGGG...GGACGCTGCCTCCTGGTCCCTGGTTGGCCTCAGACAAGCACGGCCTCGAGAAAA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS-3UTR CCA 90 bp GTGAGGACCCGCGGACCCCAACCCGCCCTTCCCTCCGTCCTGACCCGGCGCCAGGTGTTAGTTGCCTGCTaGTTGGGGTTAGCTCCTGCC +
Preference number: 4 (lower is better)
Translates to: VRTRGPQPALPSVLTRRQVLVAC*LGLAPA
Trigger: GGCAGGAGCTAACCCCAACCAGCAGGCAACTAACAC...CTGGCGCCGGGTCAGGACGGAGGGAAGGGCGGGTTGGGGTCCGCGGGTCCTCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS-3UTR CCA 90 bp GCCGTGCGGTGTGAGGACCCGCGGACCCCAACCCGCCCTTCCCTCCGTCCTGACCGAAACCCACAGGCGTaGCCTAGGGTTTGGGATGCA +
Preference number: 4 (lower is better)
Translates to: AVRCEDPRTPTRPSLRPDRNPQA*PRVWDA
Trigger: TGCATCCCAAACCCTAGGCCACGCCTGTGGGTTTCG...GTCAGGACGGAGGGAAGGGCGGGTTGGGGTCCGCGGGTCCTCACACCGCACGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360578.7
3UTR CAA 72 bp TCCTTCCACGGAGCTGTGGCCGCAGCAGGTGCACTCTaGGGAGTCGGGGAGGCGGGTGGTGCTCATGCGTGC +
Preference number: 4 (lower is better)
Translates to: SFHGAVAAAGAL*GVGEAGGAHAC
Trigger: GCACGCATGAGCACCACCCGCCTCCCCGACTCCCAAGAGTGCACCTGCTGCGGCCACAGCTCCGTGGAAGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS-3UTR TCA 90 bp GGACTGCCGCAGGCTCATCCGCAGGTAGACTCCAGAACCACGGCCCAGCAGGTCGCGCCTTGCCCTCGATaGGCCTGTGCACCTCGCGAA +
Preference number: 4 (lower is better)
Translates to: GLPQAHPQVDSRTTAQQVAPCPR*ACAPRE
Trigger: TTCGCGAGGTGCACAGGCTCATCGAGGGCAAGGCGC...GACCTGCTGGGCCGTGGTTCTGGAGTCTACCTGCGGATGAGCCTGCGGCAGTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS-3UTR TCA 90 bp TCGTCCCCACAGACCGGATCAGGGCCTGGCGAGCCTCTGTGCCTGCCGTGCGGTTGGGCTGTTATCGGGTaGTTCCGGTGGCCACTCGTC +
Preference number: 4 (lower is better)
Translates to: SSPQTGSGPGEPLCLPCGWAVIG*FRWPLV
Trigger: GACGAGTGGCCACCGGAATCACCCGATAACAGCCCA...ACCGCACGGCAGGCACAGAGGCTCGCCAGGCCCTGATCCGGTCTGTGGGGACGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS-3UTR TCA 90 bp CCTCAGGGCTCCTGGAAGGTGTCTGCCGCTCAGGAGGTCAGCACAGCCTCCTGTGGCTGGGGTAGGAGGTaGTGCCCACGCAGGGCTGCT +
Preference number: 4 (lower is better)
Translates to: PQGSWKVSAAQEVSTASCGWGRR*CPRRAA
Trigger: AGCAGCCCTGCGTGGGCATCACCTCCTACCCCAGCC...ACAGGAGGCTGTGCTGACCTCCTGAGCGGCAGACACCTTCCAGGAGCCCTGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS-3UTR GCA 90 bp TGGGTGTGTCCTGGCAGTGTGGAGTGTCCTGGATGGGCTCTGCTCAGCCCCCTGGCTTCCCCACACATGTaGCAGGCGCCCAGCACCCCC +
Preference number: 4 (lower is better)
Translates to: WVCPGSVECPGWALLSPLASPHM*QAPSTP
Trigger: GGGGGTGCTGGGCGCCTGGCACATGTGTGGGGAAGC...CAGGGGGCTGAGCAGAGCCCATCCAGGACACTCCACACTGCCAGGACACACCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS-3UTR GCA 90 bp CCTCAGGGCTCCTGGAAGGTGTCTGCCGCTCAGGAGGTCAGCACAGCCTCCTGTGTCGGTGACAGGGCCTaGTCCCTGCGAGGTCGGGTG +
Preference number: 4 (lower is better)
Translates to: PQGSWKVSAAQEVSTASCVGDRA*SLRGRV
Trigger: CACCCGACCTCGCAGGGAGCAGGCCCTGTCACCGAC...ACAGGAGGCTGTGCTGACCTCCTGAGCGGCAGACACCTTCCAGGAGCCCTGAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS-3UTR GCA 90 bp GCCGTGCGGTGTGAGGACCCGCGGACCCCAACCCGCCCTTCCCTCCGTCCTGACCCCAACTCCACCATCTaGGCCCAAACTTGGACAGGA +
Preference number: 4 (lower is better)
Translates to: AVRCEDPRTPTRPSLRPDPNSTI*AQTWTG
Trigger: TCCTGTCCAAGTTTGGGCGCAGATGGTGGAGTTGGG...GTCAGGACGGAGGGAAGGGCGGGTTGGGGTCCGCGGGTCCTCACACCGCACGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS-3UTR CCA 90 bp GTGAGGACCCGCGGACCCCAACCCGCCCTTCCCTCCGTCCTGACCCGGCGCCAGGAGACACTTTGGAAATaGCTGAGGACGAGGCAGGTG +
Preference number: 4 (lower is better)
Translates to: VRTRGPQPALPSVLTRRQETLWK*LRTRQV
Trigger: CACCTGCCTCGTCCTCAGCCATTTCCAAAGTGTCTC...CTGGCGCCGGGTCAGGACGGAGGGAAGGGCGGGTTGGGGTCCGCGGGTCCTCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS-3UTR CCA 90 bp GGACTGCCGCAGGCTCATCCGCAGGTAGACTCCAGAACCACGGCCCAGCAGGTCCTGGGAGCTCCGCCCTaGGGCTTCTGCTCTGCTCAG +
Preference number: 4 (lower is better)
Translates to: GLPQAHPQVDSRTTAQQVLGAPP*GFCSAQ
Trigger: CTGAGCAGAGCAGAAGCCCCAGGGCGGAGCTCCCAG...GACCTGCTGGGCCGTGGTTCTGGAGTCTACCTGCGGATGAGCCTGCGGCAGTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS-3UTR CCA 90 bp CTCGTCCCCACAGACCGGATCAGGGCCTGGCGAGCCTCTGTGCCTGCCGTGCGGTGCTCCCGATGCGCTTaGCTCTTTTCTCGAGGCCGT +
Preference number: 4 (lower is better)
Translates to: LVPTDRIRAWRASVPAVRCSRCA*LFSRGR
Trigger: ACGGCCTCGAGAAAAGAGCCAAGCGCATCGGGAGCA...CCGCACGGCAGGCACAGAGGCTCGCCAGGCCCTGATCCGGTCTGTGGGGACGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS-3UTR TCA 90 bp TCGTCCCCACAGACCGGATCAGGGCCTGGCGAGCCTCTGTGCCTGCCGTGCGGTTCTGGGGCACCCGTCTaGGTTCTGCCCCAGTTAGTA +
Preference number: 4 (lower is better)
Translates to: SSPQTGSGPGEPLCLPCGSGAPV*VLPQLV
Trigger: TACTAACTGGGGCAGAACTCAGACGGGTGCCCCAGA...ACCGCACGGCAGGCACAGAGGCTCGCCAGGCCCTGATCCGGTCTGTGGGGACGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS-3UTR TCA 90 bp CCTGGCAACACCACAGGGACCGGACATTCTGAATCTTCCCAGACCCGCTCTGAGCCCTTCCCTCCGTCCTaGCCCGGCGCCAGGCTCAGC +
Preference number: 4 (lower is better)
Translates to: PGNTTGTGHSESSQTRSEPFPPS*PGARLS
Trigger: GCTGAGCCTGGCGCCGGGTCAGGACGGAGGGAAGGG...CTCAGAGCGGGTCTGGGAAGATTCAGAATGTCCGGTCCCTGTGGTGTTGCCAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS-3UTR TCA 90 bp CCTCAGGGCTCCTGGAAGGTGTCTGCCGCTCAGGAGGTCAGCACAGCCTCCTGTGAGGCCGTGCTTGTCTaGGGCCAACCAGGGACCAGG +
Preference number: 4 (lower is better)
Translates to: PQGSWKVSAAQEVSTASCEAVLV*GQPGTR
Trigger: CCTGGTCCCTGGTTGGCCTCAGACAAGCACGGCCTC...ACAGGAGGCTGTGCTGACCTCCTGAGCGGCAGACACCTTCCAGGAGCCCTGAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS-3UTR GCA 90 bp CTCTTCTCGTGCTCAGGGCCGGTTTCTGGTGTGCTCCCGATGCGCTTGGCTCTTTGGGGACACCGGCAGTaGCGCGAGGCATGGAGCGGG +
Preference number: 4 (lower is better)
Translates to: LFSCSGPVSGVLPMRLALWGHRQ*REAWSG
Trigger: CCCGCTCCATGCCTCGCGGCACTGCCGGTGTCCCCA...AAGAGCCAAGCGCATCGGGAGCACACCAGAAACCGGCCCTGAGCACGAGAAGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS-3UTR GCA 90 bp GCCGTGCGGTGTGAGGACCCGCGGACCCCAACCCGCCCTTCCCTCCGTCCTGACTCGTTTTACCTAGGTTaGCCTTGGCACAGAGCTGGC +
Preference number: 4 (lower is better)
Translates to: AVRCEDPRTPTRPSLRPDSFYLG*PWHRAG
Trigger: GCCAGCTCTGTGCCAAGGGCAACCTAGGTAAAACGA...GTCAGGACGGAGGGAAGGGCGGGTTGGGGTCCGCGGGTCCTCACACCGCACGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS-3UTR CCA 90 bp CTCCCCATCACATGCCCAGGGACAAACGCTGCACCCTGGACCACCAGAGCTCACCAGTGCCGCGAGGCATaGAGCGGGGGCTACTTGCCC +
Preference number: 4 (lower is better)
Translates to: LPITCPGTNAAPWTTRAHQCREA*SGGYLP
Trigger: GGGCAAGTAGCCCCCGCTCCATGCCTCGCGGCACTG...GTGAGCTCTGGTGGTCCAGGGTGCAGCGTTTGTCCCTGGGCATGTGATGGGGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS-3UTR CCA 90 bp CAGGGCCGGTTTCTGGTGTGCTCCCGATGCGCTTGGCTCTTTTCTCGAGGCCGTAGCACCCCCGCCAGGTaGCCTCACTCTGCCCTCTGC +
Preference number: 4 (lower is better)
Translates to: QGRFLVCSRCAWLFSRGRSTPAR*PHSALC
Trigger: GCAGAGGGCAGAGTGAGGCCACCTGGCGGGGGTGCT...ACGGCCTCGAGAAAAGAGCCAAGCGCATCGGGAGCACACCAGAAACCGGCCCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360578.7
3UTR CAA 72 bp GCGAGGTCCTCTGGAGTCATGTTCGTTCTGCGTGGCTaGGCCGTGACTGTGGGGACTGGGCTGCCCACGGAC +
Preference number: 4 (lower is better)
Translates to: ARSSGVMFVLRG*AVTVGTGLPTD
Trigger: GTCCGTGGGCAGCCCAGTCCCCACAGTCACGGCCAAGCCACGCAGAACGAACATGACTCCAGAGGACCTCGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS-3UTR GCA 90 bp CCTCAGGGCTCCTGGAAGGTGTCTGCCGCTCAGGAGGTCAGCACAGCCTCCTGTGTGGCTGTGGCTGTGTaGGTGCCAAGGGACAGTGGC +
Preference number: 4 (lower is better)
Translates to: PQGSWKVSAAQEVSTASCVAVAV*VPRDSG
Trigger: GCCACTGTCCCTTGGCACGCACACAGCCACAGCCAC...ACAGGAGGCTGTGCTGACCTCCTGAGCGGCAGACACCTTCCAGGAGCCCTGAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS-3UTR GCA 90 bp TTTTCTCGAGGCCGTGCTTGTCTGAGGCCAACCAGGGACCAGGAGGCAGCGTCCCCGCCCTGGGGCTTCTaGTCTGCTCAGGTAGGGGGA +
Preference number: 4 (lower is better)
Translates to: FSRGRACLRPTRDQEAASPPWGF*SAQVGG
Trigger: TCCCCCTACCTGAGCAGAGCAGAAGCCCCAGGGCGG...GGACGCTGCCTCCTGGTCCCTGGTTGGCCTCAGACAAGCACGGCCTCGAGAAAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS-3UTR GCA 90 bp CTCCCCATCACATGCCCAGGGACAAACGCTGCACCCTGGACCACCAGAGCTCACCCCTGCCGTGGAAGCTaGCTGCCAGGTCCTCCCCAT +
Preference number: 4 (lower is better)
Translates to: LPITCPGTNAAPWTTRAHPCRGS*LPGPPH
Trigger: ATGGGGAGGACCTGGCAGGCAGCTTCCACGGCAGGG...GTGAGCTCTGGTGGTCCAGGGTGCAGCGTTTGTCCCTGGGCATGTGATGGGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS-3UTR CCA 90 bp CTCGTCCCCACAGACCGGATCAGGGCCTGGCGAGCCTCTGTGCCTGCCGTGCGGATCCGCGAGACACTTTaGAAATGGCTGAGGACGAGG +
Preference number: 4 (lower is better)
Translates to: LVPTDRIRAWRASVPAVRIRETL*KWLRTR
Trigger: CCTCGTCCTCAGCCATTTCCAAAGTGTCTCGCGGAT...CCGCACGGCAGGCACAGAGGCTCGCCAGGCCCTGATCCGGTCTGTGGGGACGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS-3UTR CCA 90 bp TGGGTGTGTCCTGGCAGTGTGGAGTGTCCTGGATGGGCTCTGCTCAGCCCCCTGGTGGAGTGTCCTGGATaGGCTCTGCTCAGCCCCCTG +
Preference number: 4 (lower is better)
Translates to: WVCPGSVECPGWALLSPLVECPG*ALLSPL
Trigger: CAGGGGGCTGAGCAGAGCCCATCCAGGACACTCCAC...CAGGGGGCTGAGCAGAGCCCATCCAGGACACTCCACACTGCCAGGACACACCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS-3UTR CCA 90 bp CCTCAGGGCTCCTGGAAGGTGTCTGCCGCTCAGGAGGTCAGCACAGCCTCCTGTCCTTCCACGGAGCTGTaGCCGCAGCAGGTGCACTCT +
Preference number: 4 (lower is better)
Translates to: PQGSWKVSAAQEVSTASCPSTEL*PQQVHS
Trigger: AGAGTGCACCTGCTGCGGCCACAGCTCCGTGGAAGG...ACAGGAGGCTGTGCTGACCTCCTGAGCGGCAGACACCTTCCAGGAGCCCTGAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS-3UTR CCA 90 bp CTCTTCTCGTGCTCAGGGCCGGTTTCTGGTGTGCTCCCGATGCGCTTGGCTCTTGGGAGAGTGGGGGCGTaGGGCCTCTCCCTCCAGGAT +
Preference number: 4 (lower is better)
Translates to: LFSCSGPVSGVLPMRLALGRVGA*GLSLQD
Trigger: ATCCTGGAGGGAGAGGCCCCACGCCCCCACTCTCCC...AAGAGCCAAGCGCATCGGGAGCACACCAGAAACCGGCCCTGAGCACGAGAAGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS-3UTR CCA 90 bp CTCTTCTCGTGCTCAGGGCCGGTTTCTGGTGTGCTCCCGATGCGCTTGGCTCTTCTGAGCTGGCATCCCTaGGGCCCGGGATGGAGTGGC +
Preference number: 4 (lower is better)
Translates to: LFSCSGPVSGVLPMRLALLSWHP*GPGWSG
Trigger: GCCACTCCATCCCGGGCCCCAGGGATGCCAGCTCAG...AAGAGCCAAGCGCATCGGGAGCACACCAGAAACCGGCCCTGAGCACGAGAAGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360578.7
3UTR CAA 72 bp CTCCCGATGCGCTTGGCTCTTTTCTCGAGGCCGTGCTaGTCTGAGGCCAACCAGGGACCAGGAGGCAGCGTC +
Preference number: 4 (lower is better)
Translates to: LPMRLALFSRPC*SEANQGPGGSV
Trigger: GACGCTGCCTCCTGGTCCCTGGTTGGCCTCAGACAAGCACGGCCTCGAGAAAAGAGCCAAGCGCATCGGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS-3UTR TCA 90 bp GGACTGCCGCAGGCTCATCCGCAGGTAGACTCCAGAACCACGGCCCAGCAGGTCGTGCCCAGTGTGGTGTaGTCCGCGAGACACTTTGGA +
Preference number: 4 (lower is better)
Translates to: GLPQAHPQVDSRTTAQQVVPSVV*SARHFG
Trigger: TCCAAAGTGTCTCGCGGATCACACCACACTGGGCAC...GACCTGCTGGGCCGTGGTTCTGGAGTCTACCTGCGGATGAGCCTGCGGCAGTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS-3UTR TCA 90 bp AAACCACGTGCCCAGTGTGGTGTGATCCGCGAGACACTTTGGAAATGGCTGAGGGCCGTGTGGGCGAGGTaGCCCGTCGGTGACAGGGCC +
Preference number: 4 (lower is better)
Translates to: KPRAQCGVIRETLWKWLRAVWAR*PVGDRA
Trigger: GGCCCTGTCACCGACGGGTCACCTCGCCCACACGGC...CCTCAGCCATTTCCAAAGTGTCTCGCGGATCACACCACACTGGGCACGTGGTTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS-3UTR TCA 90 bp CCTGGCAACACCACAGGGACCGGACATTCTGAATCTTCCCAGACCCGCTCTGAGTGCTGTGGTCAGCCCTaGGCTGGCATCCCTGGGGCC +
Preference number: 4 (lower is better)
Translates to: PGNTTGTGHSESSQTRSECCGQP*AGIPGA
Trigger: GGCCCCAGGGATGCCAGCTCAGGGCTGACCACAGCA...CTCAGAGCGGGTCTGGGAAGATTCAGAATGTCCGGTCCCTGTGGTGTTGCCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS-3UTR TCA 90 bp GCAGGCTCATCCGCAGGTAGACTCCAGAACCACGGCCCAGCAGGTCACACGTGTCGCGGACGTCCGCGGTaGGTGCGGTTTAGACATCAG +
Preference number: 4 (lower is better)
Translates to: AGSSAGRLQNHGPAGHTCRGRPR*VRFRHQ
Trigger: CTGATGTCTAAACCGCACTCACCGCGGACGTCCGCG...ACACGTGTGACCTGCTGGGCCGTGGTTCTGGAGTCTACCTGCGGATGAGCCTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS-3UTR GCA 90 bp TTTTCTCGAGGCCGTGCTTGTCTGAGGCCAACCAGGGACCAGGAGGCAGCGTCCGACCAGTTCTTGCCGTaGATCTCCCTCCCGGTGGCC +
Preference number: 4 (lower is better)
Translates to: FSRGRACLRPTRDQEAASDQFLP*ISLPVA
Trigger: GGCCACCGGGAGGGAGATGCACGGCAAGAACTGGTC...GGACGCTGCCTCCTGGTCCCTGGTTGGCCTCAGACAAGCACGGCCTCGAGAAAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS-3UTR GCA 90 bp CTCTTGCCTGGCAACACCACAGGGACCGGACATTCTGAATCTTCCCAGACCCGCCCTCTGTGCCTGCCGTaGGGTGTGAGGACCCGCGGA +
Preference number: 4 (lower is better)
Translates to: LLPGNTTGTGHSESSQTRPLCLP*GVRTRG
Trigger: TCCGCGGGTCCTCACACCGCACGGCAGGCACAGAGG...GCGGGTCTGGGAAGATTCAGAATGTCCGGTCCCTGTGGTGTTGCCAGGCAAGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS-3UTR GCA 90 bp CTCCCCATCACATGCCCAGGGACAAACGCTGCACCCTGGACCACCAGAGCTCACTGGGAGGGTGGCCAGTaGACGCGTGATTGCCCACAG +
Preference number: 4 (lower is better)
Translates to: LPITCPGTNAAPWTTRAHWEGGQ*TRDCPQ
Trigger: CTGTGGGCAATCACGCGTGCACTGGCCACCCTCCCA...GTGAGCTCTGGTGGTCCAGGGTGCAGCGTTTGTCCCTGGGCATGTGATGGGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS-3UTR GCA 90 bp GGACTGCCGCAGGCTCATCCGCAGGTAGACTCCAGAACCACGGCCCAGCAGGTCGGACTCCCCATCACATaGCCAGGGACAAACGCTGCA +
Preference number: 4 (lower is better)
Translates to: GLPQAHPQVDSRTTAQQVGLPIT*PGTNAA
Trigger: TGCAGCGTTTGTCCCTGGGCATGTGATGGGGAGTCC...GACCTGCTGGGCCGTGGTTCTGGAGTCTACCTGCGGATGAGCCTGCGGCAGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS-3UTR CCA 90 bp TTTTCTCGAGGCCGTGCTTGTCTGAGGCCAACCAGGGACCAGGAGGCAGCGTCCAGCAGGAAGGCCCCGTaGTGTCCGCTGCACACAGGA +
Preference number: 4 (lower is better)
Translates to: FSRGRACLRPTRDQEAASSRKAP*CPLHTG
Trigger: TCCTGTGTGCAGCGGACACCACGGGGCCTTCCTGCT...GGACGCTGCCTCCTGGTCCCTGGTTGGCCTCAGACAAGCACGGCCTCGAGAAAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS-3UTR CCA 90 bp CCTGGCAACACCACAGGGACCGGACATTCTGAATCTTCCCAGACCCGCTCTGAGCTCAGCGGACCATGCTaGCTGGGAGCTCCGCCCTGG +
Preference number: 4 (lower is better)
Translates to: PGNTTGTGHSESSQTRSELSGPC*LGAPPW
Trigger: CCAGGGCGGAGCTCCCAGCCAGCATGGTCCGCTGAG...CTCAGAGCGGGTCTGGGAAGATTCAGAATGTCCGGTCCCTGTGGTGTTGCCAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS-3UTR CCA 90 bp CTCGTCCCCACAGACCGGATCAGGGCCTGGCGAGCCTCTGTGCCTGCCGTGCGGGAGATGGGAGCCGAGTaGGTGTTTTCAAAGATTCGC +
Preference number: 4 (lower is better)
Translates to: LVPTDRIRAWRASVPAVREMGAE*VFSKIR
Trigger: GCGAATCTTTGAAAACACCCACTCGGCTCCCATCTC...CCGCACGGCAGGCACAGAGGCTCGCCAGGCCCTGATCCGGTCTGTGGGGACGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS-3UTR TCA 90 bp TTTTCTCGAGGCCGTGCTTGTCTGAGGCCAACCAGGGACCAGGAGGCAGCGTCCGCCGCCCACTGCCCCTaGCGGCTTTCGTTTTACCTA +
Preference number: 4 (lower is better)
Translates to: FSRGRACLRPTRDQEAASAAHCP*RLSFYL
Trigger: TAGGTAAAACGAAAGCCGTCAGGGGCAGTGGGCGGC...GGACGCTGCCTCCTGGTCCCTGGTTGGCCTCAGACAAGCACGGCCTCGAGAAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS-3UTR TCA 90 bp TTACCTAGGTTGCCCTTGGCACAGAGCTGGCCTGTAGGCATGTGTGCACAGGTGGGCTCTGTCACGCGGTaGGGCGAGGAGTGTCTCGGC +
Preference number: 4 (lower is better)
Translates to: LPRLPLAQSWPVGMCAQVGSVTR*GEECLG
Trigger: GCCGAGACACTCCTCGCCTCACCGCGTGACAGAGCC...CACCTGTGCACACATGCCTACAGGCCAGCTCTGTGCCAAGGGCAACCTAGGTAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS-3UTR TCA 90 bp GCCGTGCGGTGTGAGGACCCGCGGACCCCAACCCGCCCTTCCCTCCGTCCTGACTTTTCTCTCTCAGAGTaGAGGGACCACTTCTGTGAA +
Preference number: 4 (lower is better)
Translates to: AVRCEDPRTPTRPSLRPDFSLSE*RDHFCE
Trigger: TTCACAGAAGTGGTCCCTTCACTCTGAGAGAGAAAA...GTCAGGACGGAGGGAAGGGCGGGTTGGGGTCCGCGGGTCCTCACACCGCACGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS-3UTR GCA 90 bp TTACCTAGGTTGCCCTTGGCACAGAGCTGGCCTGTAGGCATGTGTGCACAGGTGCTCAGGGGATGCGGCTaGCCCCTCACCAGCACCCTC +
Preference number: 4 (lower is better)
Translates to: LPRLPLAQSWPVGMCAQVLRGCG*PLTSTL
Trigger: GAGGGTGCTGGTGAGGGGGCAGCCGCATCCCCTGAG...CACCTGTGCACACATGCCTACAGGCCAGCTCTGTGCCAAGGGCAACCTAGGTAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS-3UTR GCA 90 bp TTTTCTCGAGGCCGTGCTTGTCTGAGGCCAACCAGGGACCAGGAGGCAGCGTCCCTGGTCGTAGGTGCCTaGGTGCTTGTAGCCGGACAC +
Preference number: 4 (lower is better)
Translates to: FSRGRACLRPTRDQEAASLVVGA*VLVAGH
Trigger: GTGTCCGGCTACAAGCACGCAGGCACCTACGACCAG...GGACGCTGCCTCCTGGTCCCTGGTTGGCCTCAGACAAGCACGGCCTCGAGAAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS-3UTR GCA 90 bp CAGGGCCGGTTTCTGGTGTGCTCCCGATGCGCTTGGCTCTTTTCTCGAGGCCGTGGTTTGAGAGGGGAGTaGTGGGGGCATCCGGTAGGA +
Preference number: 4 (lower is better)
Translates to: QGRFLVCSRCAWLFSRGRGLRGE*WGHPVG
Trigger: TCCTACCGGATGCCCCCAGCACTCCCCTCTCAAACC...ACGGCCTCGAGAAAAGAGCCAAGCGCATCGGGAGCACACCAGAAACCGGCCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS-3UTR GCA 90 bp TTACCTAGGTTGCCCTTGGCACAGAGCTGGCCTGTAGGCATGTGTGCACAGGTGCCCCGTGGTGTCCGCTaGACACAGGACAGGCCTCGG +
Preference number: 4 (lower is better)
Translates to: LPRLPLAQSWPVGMCAQVPRGVR*TQDRPR
Trigger: CCGAGGCCTGTCCTGTGTGCAGCGGACACCACGGGG...CACCTGTGCACACATGCCTACAGGCCAGCTCTGTGCCAAGGGCAACCTAGGTAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS-3UTR GCA 90 bp TTTTCTCGAGGCCGTGCTTGTCTGAGGCCAACCAGGGACCAGGAGGCAGCGTCCAAGTTTCCCCAGGACTaGCGCAGGCTCATCCGCAGG +
Preference number: 4 (lower is better)
Translates to: FSRGRACLRPTRDQEAASKFPQD*RRLIRR
Trigger: CCTGCGGATGAGCCTGCGGCAGTCCTGGGGAAACTT...GGACGCTGCCTCCTGGTCCCTGGTTGGCCTCAGACAAGCACGGCCTCGAGAAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS-3UTR GCA 90 bp GCCACCCTGTTTGGTGACCACTCGTCCTCGGCCTTTTCAACACAAGGGCTTTGGCGGGGAGGCGGGTGGTaGTCATGCGTGCCAGTGAGG +
Preference number: 4 (lower is better)
Translates to: ATLFGDHSSSAFSTQGLWRGGGW*SCVPVR
Trigger: CCTCACTGGCACGCATGAGCACCACCCGCCTCCCCG...CCAAAGCCCTTGTGTTGAAAAGGCCGAGGACGAGTGGTCACCAAACAGGGTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS-3UTR GCA 90 bp GGACGAGGCAGGTGTATTAGGAGGGTCAGCGAACTGGGGCCCAAACCTGGTTTGGCCGTGGAAGCTGCCTaGCAGGTCCTCCCCATCCTC +
Preference number: 4 (lower is better)
Translates to: GRGRCIRRVSELGPKPGLAVEAA*QVLPIL
Trigger: GAGGATGGGGAGGACCTGGCAGGCAGCTTCCACGGC...CAAACCAGGTTTGGGCCCCAGTTCGCTGACCCTCCTAATACACCTGCCTCGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS-3UTR GCA 90 bp CTCTTGCCTGGCAACACCACAGGGACCGGACATTCTGAATCTTCCCAGACCCGCGCTGTGGTGAGTCGGTaGTGGCCGTGTGGGCGAGGT +
Preference number: 4 (lower is better)
Translates to: LLPGNTTGTGHSESSQTRAVVSR*WPCGRG
Trigger: ACCTCGCCCACACGGCCAGCACCGACTCACCACAGC...GCGGGTCTGGGAAGATTCAGAATGTCCGGTCCCTGTGGTGTTGCCAGGCAAGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS-3UTR GCA 90 bp CCTGGCAACACCACAGGGACCGGACATTCTGAATCTTCCCAGACCCGCTCTGAGTCCAGGATCCCAGGGTaGTCCAGGCCAGGACGGGCA +
Preference number: 4 (lower is better)
Translates to: PGNTTGTGHSESSQTRSESRIPG*SRPGRA
Trigger: TGCCCGTCCTGGCCTGGAGCACCCTGGGATCCTGGA...CTCAGAGCGGGTCTGGGAAGATTCAGAATGTCCGGTCCCTGTGGTGTTGCCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS-3UTR CCA 90 bp CCTGGCAACACCACAGGGACCGGACATTCTGAATCTTCCCAGACCCGCTCTGAGACAGAGTCCCTGCTCTaGGGACACCGGCAGTGCCGC +
Preference number: 4 (lower is better)
Translates to: PGNTTGTGHSESSQTRSETESLL*GHRQCR
Trigger: GCGGCACTGCCGGTGTCCCCAGAGCAGGGACTCTGT...CTCAGAGCGGGTCTGGGAAGATTCAGAATGTCCGGTCCCTGTGGTGTTGCCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS-3UTR CCA 90 bp CCTGGCAACACCACAGGGACCGGACATTCTGAATCTTCCCAGACCCGCTCTGAGCAGTCCAAGCCACTGTaGTCAGCCGGGAAGCCGCCC +
Preference number: 4 (lower is better)
Translates to: PGNTTGTGHSESSQTRSEQSKPL*SAGKPP
Trigger: GGGCGGCTTCCCGGCTGACCACAGTGGCTTGGACTG...CTCAGAGCGGGTCTGGGAAGATTCAGAATGTCCGGTCCCTGTGGTGTTGCCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS-3UTR CCA 90 bp TTTTCTCGAGGCCGTGCTTGTCTGAGGCCAACCAGGGACCAGGAGGCAGCGTCCTGCTCAGCCCCCTGCTaGCAGAGAAACCCCCACAGA +
Preference number: 4 (lower is better)
Translates to: FSRGRACLRPTRDQEAASCSAPC*QRNPHR
Trigger: TCTGTGGGGGTTTCTCTGCCAGCAGGGGGCTGAGCA...GGACGCTGCCTCCTGGTCCCTGGTTGGCCTCAGACAAGCACGGCCTCGAGAAAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS-3UTR CCA 90 bp GGACGAGGCAGGTGTATTAGGAGGGTCAGCGAACTGGGGCCCAAACCTGGTTTGCAGGAGGCAGCGTCCTaGTGCCCAGCACCTCTCCTC +
Preference number: 4 (lower is better)
Translates to: GRGRCIRRVSELGPKPGLQEAAS*CPAPLL
Trigger: GAGGAGAGGTGCTGGGCACCAGGACGCTGCCTCCTG...CAAACCAGGTTTGGGCCCCAGTTCGCTGACCCTCCTAATACACCTGCCTCGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS-3UTR CCA 90 bp GGACGAGGCAGGTGTATTAGGAGGGTCAGCGAACTGGGGCCCAAACCTGGTTTGGTGGTGAGTCGGTGCTaGCCGTGTGGGCGAGGTGAC +
Preference number: 4 (lower is better)
Translates to: GRGRCIRRVSELGPKPGLVVSRC*PCGRGD
Trigger: GTCACCTCGCCCACACGGCCAGCACCGACTCACCAC...CAAACCAGGTTTGGGCCCCAGTTCGCTGACCCTCCTAATACACCTGCCTCGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS-3UTR CCA 90 bp GAAATGGCTGAGGACGAGGCAGGTGTATTAGGAGGGTCAGCGAACTGGGGCCCACCCTGGGGCCCGGGATaGAGTGGCACCAACAGGCAA +
Preference number: 4 (lower is better)
Translates to: EMAEDEAGVLGGSANWGPPWGPG*SGTNRQ
Trigger: TTGCCTGTTGGTGCCACTCCATCCCGGGCCCCAGGG...TGGGCCCCAGTTCGCTGACCCTCCTAATACACCTGCCTCGTCCTCAGCCATTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360578.7
3UTR CAA 72 bp TGCTCAGGGCCGGTTTCTGGTGTGCTCCCGATGCGCTaGGCTCTTTTCTCGAGGCCGTGCTTGTCTGAGGCC +
Preference number: 4 (lower is better)
Translates to: CSGPVSGVLPMR*ALFSRPCLSEA
Trigger: GGCCTCAGACAAGCACGGCCTCGAGAAAAGAGCCAAGCGCATCGGGAGCACACCAGAAACCGGCCCTGAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS-3UTR TCA 90 bp GAAATGGCTGAGGACGAGGCAGGTGTATTAGGAGGGTCAGCGAACTGGGGCCCAGGCTTTCGTCACCCCTaGGATGATGGGCGCCTTGCC +
Preference number: 4 (lower is better)
Translates to: EMAEDEAGVLGGSANWGPGFRHP*DDGRLA
Trigger: GGCAAGGCGCCCATCATCTCAGGGGTGACGAAAGCC...TGGGCCCCAGTTCGCTGACCCTCCTAATACACCTGCCTCGTCCTCAGCCATTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS-3UTR TCA 90 bp CTCTTGCCTGGCAACACCACAGGGACCGGACATTCTGAATCTTCCCAGACCCGCACTTGGTGGTGTCCGTaGGCCTCGACACTGTGGGCG +
Preference number: 4 (lower is better)
Translates to: LLPGNTTGTGHSESSQTRTWWCP*ASTLWA
Trigger: CGCCCACAGTGTCGAGGCTCACGGACACCACCAAGT...GCGGGTCTGGGAAGATTCAGAATGTCCGGTCCCTGTGGTGTTGCCAGGCAAGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS-3UTR TCA 90 bp GTGTGGGGCCAATTCCGTGTTAGTTGCCTGCTGGTTGGGGTTAGCTCCTGCCACGAGAAACGCAGCCTGTaGCCAGGAGACGCAGCCCAG +
Preference number: 4 (lower is better)
Translates to: VWGQFRVSCLLVGVSSCHEKRSL*PGDAAQ
Trigger: CTGGGCTGCGTCTCCTGGTCACAGGCTGCGTTTCTC...GTGGCAGGAGCTAACCCCAACCAGCAGGCAACTAACACGGAATTGGCCCCACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS-3UTR TCA 90 bp TTACCTAGGTTGCCCTTGGCACAGAGCTGGCCTGTAGGCATGTGTGCACAGGTGTGGGAAGGGCTGTGGTaGGTCGGTGCTGGCCGTGTG +
Preference number: 4 (lower is better)
Translates to: LPRLPLAQSWPVGMCAQVWEGLW*VGAGRV
Trigger: CACACGGCCAGCACCGACTCACCACAGCCCTTCCCA...CACCTGTGCACACATGCCTACAGGCCAGCTCTGTGCCAAGGGCAACCTAGGTAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS-3UTR GCA 90 bp CCTCAGGGCTCCTGGAAGGTGTCTGCCGCTCAGGAGGTCAGCACAGCCTCCTGTGCACTTCGTGTCTCTTaGCTGGCAACACCACAGGGA +
Preference number: 4 (lower is better)
Translates to: PQGSWKVSAAQEVSTASCALRVS*LATPQG
Trigger: TCCCTGTGGTGTTGCCAGGCAAGAGACACGAAGTGC...ACAGGAGGCTGTGCTGACCTCCTGAGCGGCAGACACCTTCCAGGAGCCCTGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS-3UTR GCA 90 bp CTCTTGCCTGGCAACACCACAGGGACCGGACATTCTGAATCTTCCCAGACCCGCCTCTGCTCAGCCCCCTaGTGGCAGAGAAACCCCCAC +
Preference number: 4 (lower is better)
Translates to: LLPGNTTGTGHSESSQTRLCSAP*WQRNPH
Trigger: GTGGGGGTTTCTCTGCCAGCAGGGGGCTGAGCAGAG...GCGGGTCTGGGAAGATTCAGAATGTCCGGTCCCTGTGGTGTTGCCAGGCAAGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS-3UTR GCA 90 bp GAAATGGCTGAGGACGAGGCAGGTGTATTAGGAGGGTCAGCGAACTGGGGCCCAGAGGCAGCGTCCTGGTaGCCAGCACCTCTCCTCAGT +
Preference number: 4 (lower is better)
Translates to: EMAEDEAGVLGGSANWGPEAASW*PAPLLS
Trigger: ACTGAGGAGAGGTGCTGGGCACCAGGACGCTGCCTC...TGGGCCCCAGTTCGCTGACCCTCCTAATACACCTGCCTCGTCCTCAGCCATTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS-3UTR GCA 90 bp GCAGGCTCATCCGCAGGTAGACTCCAGAACCACGGCCCAGCAGGTCACACGTGTCACGGGTCTGTTATGTaGAGTGGGGCTGCCGTCCAA +
Preference number: 4 (lower is better)
Translates to: AGSSAGRLQNHGPAGHTCHGSVM*SGAAVQ
Trigger: TTGGACGGCAGCCCCACTGCACATAACAGACCCGTG...ACACGTGTGACCTGCTGGGCCGTGGTTCTGGAGTCTACCTGCGGATGAGCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS-3UTR GCA 90 bp GAAATGGCTGAGGACGAGGCAGGTGTATTAGGAGGGTCAGCGAACTGGGGCCCACCCAGGGACAAACGCTaGACCCTGGACCACCAGAGC +
Preference number: 4 (lower is better)
Translates to: EMAEDEAGVLGGSANWGPPRDKR*TLDHQS
Trigger: GCTCTGGTGGTCCAGGGTGCAGCGTTTGTCCCTGGG...TGGGCCCCAGTTCGCTGACCCTCCTAATACACCTGCCTCGTCCTCAGCCATTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS-3UTR CCA 90 bp CAGGGCCGGTTTCTGGTGTGCTCCCGATGCGCTTGGCTCTTTTCTCGAGGCCGTCTCCCACGTCCGGTGTaGGGCCAATTCCGTGTTAGT +
Preference number: 4 (lower is better)
Translates to: QGRFLVCSRCAWLFSRGRLPRPV*GQFRVS
Trigger: ACTAACACGGAATTGGCCCCACACCGGACGTGGGAG...ACGGCCTCGAGAAAAGAGCCAAGCGCATCGGGAGCACACCAGAAACCGGCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS-3UTR CCA 90 bp AAACCACGTGCCCAGTGTGGTGTGATCCGCGAGACACTTTGGAAATGGCTGAGGCAAGGGCGGGCCGCCTaGGTGTGTCCTGGCAGTGTG +
Preference number: 4 (lower is better)
Translates to: KPRAQCGVIRETLWKWLRQGRAA*VCPGSV
Trigger: CACACTGCCAGGACACACCCAGGCGGCCCGCCCTTG...CCTCAGCCATTTCCAAAGTGTCTCGCGGATCACACCACACTGGGCACGTGGTTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS-3UTR CCA 90 bp GTGTGGGGCCAATTCCGTGTTAGTTGCCTGCTGGTTGGGGTTAGCTCCTGCCACCATTGTGACAGCGGGTaGCCACACCCGTCAGCCTCC +
Preference number: 4 (lower is better)
Translates to: VWGQFRVSCLLVGVSSCHHCDSG*PHPSAS
Trigger: GGAGGCTGACGGGTGTGGCCACCCGCTGTCACAATG...GTGGCAGGAGCTAACCCCAACCAGCAGGCAACTAACACGGAATTGGCCCCACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS-3UTR CCA 90 bp TTACCTAGGTTGCCCTTGGCACAGAGCTGGCCTGTAGGCATGTGTGCACAGGTGGGGCCCGGGATGGAGTaGCACCAACAGGCAAGTGGG +
Preference number: 4 (lower is better)
Translates to: LPRLPLAQSWPVGMCAQVGPGME*HQQASG
Trigger: CCCACTTGCCTGTTGGTGCCACTCCATCCCGGGCCC...CACCTGTGCACACATGCCTACAGGCCAGCTCTGTGCCAAGGGCAACCTAGGTAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360578.7
3UTR CAA 72 bp GGGTCTCAGGCTTCGGGACCTGGGGAGCCACCCTGTTaGGTGACCACTCGTCCTCGGCCTTTTCAACACAAG +
Preference number: 4 (lower is better)
Translates to: GSQASGPGEPPC*VTTRPRPFQHK
Trigger: CTTGTGTTGAAAAGGCCGAGGACGAGTGGTCACCAAACAGGGTGGCTCCCCAGGTCCCGAAGCCTGAGACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS-3UTR TCA 90 bp GTGTGGGGCCAATTCCGTGTTAGTTGCCTGCTGGTTGGGGTTAGCTCCTGCCACGCCGGACACATAGCCTaGCTCGTCCACCAGATCCAC +
Preference number: 4 (lower is better)
Translates to: VWGQFRVSCLLVGVSSCHAGHIA*LVHQIH
Trigger: GTGGATCTGGTGGACGAGTCAGGCTATGTGTCCGGC...GTGGCAGGAGCTAACCCCAACCAGCAGGCAACTAACACGGAATTGGCCCCACAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS-3UTR TCA 90 bp GTGTGGGGCCAATTCCGTGTTAGTTGCCTGCTGGTTGGGGTTAGCTCCTGCCACTTCCCAGACCCGCTCTaGGAACATAGGCAGCCACCG +
Preference number: 4 (lower is better)
Translates to: VWGQFRVSCLLVGVSSCHFPDPL*EHRQPP
Trigger: CGGTGGCTGCCTATGTTCTCAGAGCGGGTCTGGGAA...GTGGCAGGAGCTAACCCCAACCAGCAGGCAACTAACACGGAATTGGCCCCACAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS-3UTR TCA 90 bp GTGTGGGGCCAATTCCGTGTTAGTTGCCTGCTGGTTGGGGTTAGCTCCTGCCACAGCCACCCTGTTTGGTaGCCACTCGTCCTCGGCCTT +
Preference number: 4 (lower is better)
Translates to: VWGQFRVSCLLVGVSSCHSHPVW*PLVLGL
Trigger: AAGGCCGAGGACGAGTGGTCACCAAACAGGGTGGCT...GTGGCAGGAGCTAACCCCAACCAGCAGGCAACTAACACGGAATTGGCCCCACAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS-3UTR TCA 90 bp GCCACCCTGTTTGGTGACCACTCGTCCTCGGCCTTTTCAACACAAGGGCTTTGGTGGCTCCCGCATGTCTaGGAAAAGCCTGAGGGCCGC +
Preference number: 4 (lower is better)
Translates to: ATLFGDHSSSAFSTQGLWWLPHV*EKPEGR
Trigger: GCGGCCCTCAGGCTTTTCTCAGACATGCGGGAGCCA...CCAAAGCCCTTGTGTTGAAAAGGCCGAGGACGAGTGGTCACCAAACAGGGTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS-3UTR TCA 90 bp CTCCCCATCACATGCCCAGGGACAAACGCTGCACCCTGGACCACCAGAGCTCACGATTCGCTTTGGAGCTaGGTGGAGAAGGGTGCTCTC +
Preference number: 4 (lower is better)
Translates to: LPITCPGTNAAPWTTRAHDSLWS*VEKGAL
Trigger: GAGAGCACCCTTCTCCACTCAGCTCCAAAGCGAATC...GTGAGCTCTGGTGGTCCAGGGTGCAGCGTTTGTCCCTGGGCATGTGATGGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS-3UTR TCA 90 bp CCTGGCAACACCACAGGGACCGGACATTCTGAATCTTCCCAGACCCGCTCTGAGTGGCCAGTGCACGCGTaGTTGCCCACAGGAGGAGAT +
Preference number: 4 (lower is better)
Translates to: PGNTTGTGHSESSQTRSEWPVHA*LPTGGD
Trigger: ATCTCCTCCTGTGGGCAATCACGCGTGCACTGGCCA...CTCAGAGCGGGTCTGGGAAGATTCAGAATGTCCGGTCCCTGTGGTGTTGCCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS-3UTR GCA 90 bp GTGTGGGGCCAATTCCGTGTTAGTTGCCTGCTGGTTGGGGTTAGCTCCTGCCACGCTTCGACCAGTTCTTaGCGTGCATCTCCCTCCCGG +
Preference number: 4 (lower is better)
Translates to: VWGQFRVSCLLVGVSSCHASTSS*RASPSR
Trigger: CCGGGAGGGAGATGCACGGCAAGAACTGGTCGAAGC...GTGGCAGGAGCTAACCCCAACCAGCAGGCAACTAACACGGAATTGGCCCCACAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS-3UTR GCA 90 bp GGGCCAGTAGAGGGACAGGTAAGTGTCCAGGGCCAAGGCATCTCCATCTCAACTCCTTGCCCTTGCCCTTaGCAGAGGGGTCGAAGCGCT +
Preference number: 4 (lower is better)
Translates to: GPVEGQVSVQGQGISISTPCPCP*QRGRSA
Trigger: AGCGCTTCGACCCCTCTGGCAAGGGCAAGGGCAAGG...AGTTGAGATGGAGATGCCTTGGCCCTGGACACTTACCTGTCCCTCTACTGGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS-3UTR GCA 90 bp GCCACCCTGTTTGGTGACCACTCGTCCTCGGCCTTTTCAACACAAGGGCTTTGGGTTGGGGTTAGCTCCTaGCACCCTCAGGGCTCCTGG +
Preference number: 4 (lower is better)
Translates to: ATLFGDHSSSAFSTQGLWVGVSS*HPQGSW
Trigger: CCAGGAGCCCTGAGGGTGGCAGGAGCTAACCCCAAC...CCAAAGCCCTTGTGTTGAAAAGGCCGAGGACGAGTGGTCACCAAACAGGGTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS-3UTR GCA 90 bp GGACTGCCGCAGGCTCATCCGCAGGTAGACTCCAGAACCACGGCCCAGCAGGTCCAATTCCGTGTTAGTTaGCTGCTGGTTGGGGTTAGC +
Preference number: 4 (lower is better)
Translates to: GLPQAHPQVDSRTTAQQVQFRVS*LLVGVS
Trigger: GCTAACCCCAACCAGCAGGCAACTAACACGGAATTG...GACCTGCTGGGCCGTGGTTCTGGAGTCTACCTGCGGATGAGCCTGCGGCAGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS-3UTR CCA 90 bp CTCTTGCCTGGCAACACCACAGGGACCGGACATTCTGAATCTTCCCAGACCCGCCAGTGTGGAGTGTCCTaGATGGGCTCTGCTCAGCCC +
Preference number: 4 (lower is better)
Translates to: LLPGNTTGTGHSESSQTRQCGVS*MGSAQP
Trigger: GGGCTGAGCAGAGCCCATCCAGGACACTCCACACTG...GCGGGTCTGGGAAGATTCAGAATGTCCGGTCCCTGTGGTGTTGCCAGGCAAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS-3UTR CCA 90 bp AAACCACGTGCCCAGTGTGGTGTGATCCGCGAGACACTTTGGAAATGGCTGAGGCAGCAGGTGCACTCTTaGGAGTCGGGGAGGCGGGTG +
Preference number: 4 (lower is better)
Translates to: KPRAQCGVIRETLWKWLRQQVHS*ESGRRV
Trigger: CACCCGCCTCCCCGACTCCCAAGAGTGCACCTGCTG...CCTCAGCCATTTCCAAAGTGTCTCGCGGATCACACCACACTGGGCACGTGGTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS-3UTR CCA 90 bp CTCTTGCCTGGCAACACCACAGGGACCGGACATTCTGAATCTTCCCAGACCCGCTCAGGCTTCGGGACCTaGGGAGCCACCCTGTTTGGT +
Preference number: 4 (lower is better)
Translates to: LLPGNTTGTGHSESSQTRSGFGT*GATLFG
Trigger: ACCAAACAGGGTGGCTCCCCAGGTCCCGAAGCCTGA...GCGGGTCTGGGAAGATTCAGAATGTCCGGTCCCTGTGGTGTTGCCAGGCAAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS-3UTR CCA 90 bp GTGTGGGGCCAATTCCGTGTTAGTTGCCTGCTGGTTGGGGTTAGCTCCTGCCACCGTGGGCACCAACCCTaGAAGTGTGGAGGGAGAGTG +
Preference number: 4 (lower is better)
Translates to: VWGQFRVSCLLVGVSSCHRGHQP*KCGGRV
Trigger: CACTCTCCCTCCACACTTCCAGGGTTGGTGCCCACG...GTGGCAGGAGCTAACCCCAACCAGCAGGCAACTAACACGGAATTGGCCCCACAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS-3UTR CCA 90 bp CTCTTCTCGTGCTCAGGGCCGGTTTCTGGTGTGCTCCCGATGCGCTTGGCTCTTCGTGCCTCTAACTCGTaGGCACCAACCCTGGAAGTG +
Preference number: 4 (lower is better)
Translates to: LFSCSGPVSGVLPMRLALRASNS*APTLEV
Trigger: CACTTCCAGGGTTGGTGCCCACGAGTTAGAGGCACG...AAGAGCCAAGCGCATCGGGAGCACACCAGAAACCGGCCCTGAGCACGAGAAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS-3UTR CCA 90 bp TGGGTGTGTCCTGGCAGTGTGGAGTGTCCTGGATGGGCTCTGCTCAGCCCCCTGACAAACGCTGCACCCTaGACCACCAGAGCTCACAAA +
Preference number: 4 (lower is better)
Translates to: WVCPGSVECPGWALLSPLTNAAP*TTRAHK
Trigger: TTTGTGAGCTCTGGTGGTCCAGGGTGCAGCGTTTGT...CAGGGGGCTGAGCAGAGCCCATCCAGGACACTCCACACTGCCAGGACACACCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS-3UTR CCA 90 bp TGGGTGTGTCCTGGCAGTGTGGAGTGTCCTGGATGGGCTCTGCTCAGCCCCCTGAGAACAGCCATGACGTaGACATCACCCGTCACACTG +
Preference number: 4 (lower is better)
Translates to: WVCPGSVECPGWALLSPLRTAMT*TSPVTL
Trigger: CAGTGTGACGGGTGATGTCCACGTCATGGCTGTTCT...CAGGGGGCTGAGCAGAGCCCATCCAGGACACTCCACACTGCCAGGACACACCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000360578.7
3UTR CAA 72 bp CGCCCACTGCCCCTGACGGCTTTCGTTTTACCTAGGTaGCCCTTGGCACAGAGCTGGCCTGTAGGCATGTGT +
Preference number: 4 (lower is better)
Translates to: RPLPLTAFVLPR*PLAQSWPVGMC
Trigger: ACACATGCCTACAGGCCAGCTCTGTGCCAAGGGCAACCTAGGTAAAACGAAAGCCGTCAGGGGCAGTGGGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS-3UTR TCA 90 bp TTTTCTCGAGGCCGTGCTTGTCTGAGGCCAACCAGGGACCAGGAGGCAGCGTCCTTTAAAACGCCCCTTTaGCCTGCAAACCACGTGCCC +
Preference number: 4 (lower is better)
Translates to: FSRGRACLRPTRDQEAASFKTPL*PANHVP
Trigger: GGGCACGTGGTTTGCAGGTCAAAGGGGCGTTTTAAA...GGACGCTGCCTCCTGGTCCCTGGTTGGCCTCAGACAAGCACGGCCTCGAGAAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS-3UTR TCA 90 bp CTCGTCCCCACAGACCGGATCAGGGCCTGGCGAGCCTCTGTGCCTGCCGTGCGGGTCACTTTACCAACTTaGCACACAATGTTAACGACA +
Preference number: 4 (lower is better)
Translates to: LVPTDRIRAWRASVPAVRVTLPT*HTMLTT
Trigger: TGTCGTTAACATTGTGTGTCAAGTTGGTAAAGTGAC...CCGCACGGCAGGCACAGAGGCTCGCCAGGCCCTGATCCGGTCTGTGGGGACGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS-3UTR GCA 90 bp GTTGTTTTCAAATGTTTCCGCACGTTAGTTCTGCCTTTCACACGCGGTCCAGCCGCCCTGGCGTCCCCGTaGACGGCAAAGCGCCGGAAG +
Preference number: 4 (lower is better)
Translates to: VVFKCFRTLVLPFTRGPAALASP*TAKRRK
Trigger: CTTCCGGCGCTTTGCCGTGCACGGGGACGCCAGGGC...GGCTGGACCGCGTGTGAAAGGCAGAACTAACGTGCGGAAACATTTGAAAACAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS-3UTR GCA 90 bp GGGCCAGTAGAGGGACAGGTAAGTGTCCAGGGCCAAGGCATCTCCATCTCAACTCGGAGGCTCTTCTCGTaGTCAGGGCCGGTTTCTGGT +
Preference number: 4 (lower is better)
Translates to: GPVEGQVSVQGQGISISTRRLFS*SGPVSG
Trigger: ACCAGAAACCGGCCCTGAGCACGAGAAGAGCCTCCG...AGTTGAGATGGAGATGCCTTGGCCCTGGACACTTACCTGTCCCTCTACTGGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS-3UTR GCA 90 bp GGGCCAGTAGAGGGACAGGTAAGTGTCCAGGGCCAAGGCATCTCCATCTCAACTCTGAGTGGAGAAGGGTaGTCTCCTGGCTCCCGCATG +
Preference number: 4 (lower is better)
Translates to: GPVEGQVSVQGQGISISTLSGEG*SPGSRM
Trigger: CATGCGGGAGCCAGGAGAGCACCCTTCTCCACTCAG...AGTTGAGATGGAGATGCCTTGGCCCTGGACACTTACCTGTCCCTCTACTGGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS-3UTR GCA 90 bp TGGGTGTGTCCTGGCAGTGTGGAGTGTCCTGGATGGGCTCTGCTCAGCCCCCTGACAGGACAGGCCCTGTaGCAACAAAACACCATTCAC +
Preference number: 4 (lower is better)
Translates to: WVCPGSVECPGWALLSPLTGQAL*QQNTIH
Trigger: GTGAATGGTGTTTTGTTGGCACAGGGCCTGTCCTGT...CAGGGGGCTGAGCAGAGCCCATCCAGGACACTCCACACTGCCAGGACACACCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS-3UTR GCA 90 bp GAAATGGCTGAGGACGAGGCAGGTGTATTAGGAGGGTCAGCGAACTGGGGCCCACAGTGCACGCGTGATTaGCCACAGGAGGAGATGAGC +
Preference number: 4 (lower is better)
Translates to: EMAEDEAGVLGGSANWGPQCTRD*PQEEMS
Trigger: GCTCATCTCCTCCTGTGGGCAATCACGCGTGCACTG...TGGGCCCCAGTTCGCTGACCCTCCTAATACACCTGCCTCGTCCTCAGCCATTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS-3UTR GCA 90 bp CCTGGCAACACCACAGGGACCGGACATTCTGAATCTTCCCAGACCCGCTCTGAGCTCATCTTCCCCCTGTaGCATCCCCTCGTGGTGTGT +
Preference number: 4 (lower is better)
Translates to: PGNTTGTGHSESSQTRSELIFPL*HPLVVC
Trigger: ACACACCACGAGGGGATGGCACAGGGGGAAGATGAG...CTCAGAGCGGGTCTGGGAAGATTCAGAATGTCCGGTCCCTGTGGTGTTGCCAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS-3UTR CCA 90 bp GTGTGGGGCCAATTCCGTGTTAGTTGCCTGCTGGTTGGGGTTAGCTCCTGCCACACTGGGGCCCAAACCTaGTTTGAGAGGGGAGTGCTG +
Preference number: 4 (lower is better)
Translates to: VWGQFRVSCLLVGVSSCHTGAQT*FERGVL
Trigger: CAGCACTCCCCTCTCAAACCAGGTTTGGGCCCCAGT...GTGGCAGGAGCTAACCCCAACCAGCAGGCAACTAACACGGAATTGGCCCCACAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS-3UTR CCA 90 bp GCCACCCTGTTTGGTGACCACTCGTCCTCGGCCTTTTCAACACAAGGGCTTTGGCGTGACTGTGGGGACTaGGCTGCCCACGGACAGAAA +
Preference number: 4 (lower is better)
Translates to: ATLFGDHSSSAFSTQGLWRDCGD*AAHGQK
Trigger: TTTCTGTCCGTGGGCAGCCCAGTCCCCACAGTCACG...CCAAAGCCCTTGTGTTGAAAAGGCCGAGGACGAGTGGTCACCAAACAGGGTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS-3UTR CCA 90 bp GAAATGGCTGAGGACGAGGCAGGTGTATTAGGAGGGTCAGCGAACTGGGGCCCACATGTTCGTTCTGCGTaGCTTGGCCGTGACTGTGGG +
Preference number: 4 (lower is better)
Translates to: EMAEDEAGVLGGSANWGPHVRSA*LGRDCG
Trigger: CCCACAGTCACGGCCAAGCCACGCAGAACGAACATG...TGGGCCCCAGTTCGCTGACCCTCCTAATACACCTGCCTCGTCCTCAGCCATTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS-3UTR CCA 90 bp CTCTTCTCGTGCTCAGGGCCGGTTTCTGGTGTGCTCCCGATGCGCTTGGCTCTTGCGTGGCCTAGGGTTTaGGATGCACGCCACGATTTT +
Preference number: 4 (lower is better)
Translates to: LFSCSGPVSGVLPMRLALAWPRV*DARHDF
Trigger: AAAATCGTGGCGTGCATCCCAAACCCTAGGCCACGC...AAGAGCCAAGCGCATCGGGAGCACACCAGAAACCGGCCCTGAGCACGAGAAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS-3UTR CCA 90 bp GCAGGCTCATCCGCAGGTAGACTCCAGAACCACGGCCCAGCAGGTCACACGTGTTTTTGCTACCCCTCCTaGCTAGGTGACAGAGATGGG +
Preference number: 4 (lower is better)
Translates to: AGSSAGRLQNHGPAGHTCFCYPS*LGDRDG
Trigger: CCCATCTCTGTCACCTAGCCAGGAGGGGTAGCAAAA...ACACGTGTGACCTGCTGGGCCGTGGTTCTGGAGTCTACCTGCGGATGAGCCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS-3UTR TCA 90 bp CTCCCCATCACATGCCCAGGGACAAACGCTGCACCCTGGACCACCAGAGCTCACCACTTTGGAAATGGCTaGGGACGAGGCAGGTGTATT +
Preference number: 4 (lower is better)
Translates to: LPITCPGTNAAPWTTRAHHFGNG*GRGRCI
Trigger: AATACACCTGCCTCGTCCTCAGCCATTTCCAAAGTG...GTGAGCTCTGGTGGTCCAGGGTGCAGCGTTTGTCCCTGGGCATGTGATGGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS-3UTR TCA 90 bp AAACCACGTGCCCAGTGTGGTGTGATCCGCGAGACACTTTGGAAATGGCTGAGGCCTTCCCCAGGCCGGTaGGGTGACATCCTAAAGGAG +
Preference number: 4 (lower is better)
Translates to: KPRAQCGVIRETLWKWLRPSPGR*GDILKE
Trigger: CTCCTTTAGGATGTCACCTCACCGGCCTGGGGAAGG...CCTCAGCCATTTCCAAAGTGTCTCGCGGATCACACCACACTGGGCACGTGGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS-3UTR TCA 90 bp CTCTTGCCTGGCAACACCACAGGGACCGGACATTCTGAATCTTCCCAGACCCGCAAGGGACCACTTCTGTaGATGAGCTCACCTCCAGGG +
Preference number: 4 (lower is better)
Translates to: LLPGNTTGTGHSESSQTRKGPLL*MSSPPG
Trigger: CCCTGGAGGTGAGCTCATTCACAGAAGTGGTCCCTT...GCGGGTCTGGGAAGATTCAGAATGTCCGGTCCCTGTGGTGTTGCCAGGCAAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS-3UTR TCA 90 bp TTACCTAGGTTGCCCTTGGCACAGAGCTGGCCTGTAGGCATGTGTGCACAGGTGAGCCACAGGCCTGTGTaGAAACACAGGACAGGCCCT +
Preference number: 4 (lower is better)
Translates to: LPRLPLAQSWPVGMCAQVSHRPV*KHRTGP
Trigger: AGGGCCTGTCCTGTGTTTTCACACAGGCCTGTGGCT...CACCTGTGCACACATGCCTACAGGCCAGCTCTGTGCCAAGGGCAACCTAGGTAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS-3UTR GCA 90 bp AAACCACGTGCCCAGTGTGGTGTGATCCGCGAGACACTTTGGAAATGGCTGAGGCCTTCTGGTCGTAGGTaGCTGCGTGCTTGTAGCCGG +
Preference number: 4 (lower is better)
Translates to: KPRAQCGVIRETLWKWLRPSGRR*LRACSR
Trigger: CCGGCTACAAGCACGCAGGCACCTACGACCAGAAGG...CCTCAGCCATTTCCAAAGTGTCTCGCGGATCACACCACACTGGGCACGTGGTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS-3UTR GCA 90 bp AAACCACGTGCCCAGTGTGGTGTGATCCGCGAGACACTTTGGAAATGGCTGAGGGGGACAGTGGCAGTGTaGCATTGTGACAGCGGGTGG +
Preference number: 4 (lower is better)
Translates to: KPRAQCGVIRETLWKWLRGTVAV*HCDSGW
Trigger: CCACCCGCTGTCACAATGGCACACTGCCACTGTCCC...CCTCAGCCATTTCCAAAGTGTCTCGCGGATCACACCACACTGGGCACGTGGTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS-3UTR GCA 90 bp AAACCACGTGCCCAGTGTGGTGTGATCCGCGAGACACTTTGGAAATGGCTGAGGCTGGGGCTTCTGCTCTaGTCAGGTAGGGGGAGTCCT +
Preference number: 4 (lower is better)
Translates to: KPRAQCGVIRETLWKWLRLGLLL*SGRGSP
Trigger: AGGACTCCCCCTACCTGAGCAGAGCAGAAGCCCCAG...CCTCAGCCATTTCCAAAGTGTCTCGCGGATCACACCACACTGGGCACGTGGTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS-3UTR GCA 90 bp CCTGGCAACACCACAGGGACCGGACATTCTGAATCTTCCCAGACCCGCTCTGAGCTTTTCTCGAGGCCGTaGTTGTCTGAGGCCAACCAG +
Preference number: 4 (lower is better)
Translates to: PGNTTGTGHSESSQTRSELFSRP*LSEANQ
Trigger: CTGGTTGGCCTCAGACAAGCACGGCCTCGAGAAAAG...CTCAGAGCGGGTCTGGGAAGATTCAGAATGTCCGGTCCCTGTGGTGTTGCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS-3UTR CCA 90 bp GGACGAGGCAGGTGTATTAGGAGGGTCAGCGAACTGGGGCCCAAACCTGGTTTGCTTGGGCTGTGGCAATaGGAGGTCTGCGAGCAAACA +
Preference number: 4 (lower is better)
Translates to: GRGRCIRRVSELGPKPGLLGLWQ*EVCEQT
Trigger: TGTTTGCTCGCAGACCTCCCATTGCCACAGCCCAAG...CAAACCAGGTTTGGGCCCCAGTTCGCTGACCCTCCTAATACACCTGCCTCGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS-3UTR CCA 90 bp AAACCACGTGCCCAGTGTGGTGTGATCCGCGAGACACTTTGGAAATGGCTGAGGAGCAGGTCACACGTGTaGCTGTGGCTGTGTGCGTGC +
Preference number: 4 (lower is better)
Translates to: KPRAQCGVIRETLWKWLRSRSHV*LWLCAC
Trigger: GCACGCACACAGCCACAGCCACACGTGTGACCTGCT...CCTCAGCCATTTCCAAAGTGTCTCGCGGATCACACCACACTGGGCACGTGGTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360578.7
3UTR CAA 72 bp CTGCCCCTGACGGCTTTCGTTTTACCTAGGTTGCCCTaGGCACAGAGCTGGCCTGTAGGCATGTGTGCACAG +
Preference number: 4 (lower is better)
Translates to: LPLTAFVLPRLP*AQSWPVGMCAQ
Trigger: CTGTGCACACATGCCTACAGGCCAGCTCTGTGCCAAGGGCAACCTAGGTAAAACGAAAGCCGTCAGGGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS-3UTR TCA 90 bp TTACCTAGGTTGCCCTTGGCACAGAGCTGGCCTGTAGGCATGTGTGCACAGGTGGGAACTGCTCAAAGGTaGTGGTCCGGCAAGACTTCC +
Preference number: 4 (lower is better)
Translates to: LPRLPLAQSWPVGMCAQVGTAQR*WSGKTS
Trigger: GGAAGTCTTGCCGGACCATCACCTTTGAGCAGTTCC...CACCTGTGCACACATGCCTACAGGCCAGCTCTGTGCCAAGGGCAACCTAGGTAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS-3UTR TCA 90 bp GTGTGGGGCCAATTCCGTGTTAGTTGCCTGCTGGTTGGGGTTAGCTCCTGCCACCGCTGCTCTTGTCTTTaGATCGCTTCTTGGCGAGCT +
Preference number: 4 (lower is better)
Translates to: VWGQFRVSCLLVGVSSCHRCSCL*IASWRA
Trigger: AGCTCGCCAAGAAGCGATTCAAAGACAAGAGCAGCG...GTGGCAGGAGCTAACCCCAACCAGCAGGCAACTAACACGGAATTGGCCCCACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS-3UTR TCA 90 bp CCTGGCAACACCACAGGGACCGGACATTCTGAATCTTCCCAGACCCGCTCTGAGCAGGAGAGGTTAGGCTaGGCCATTTTGGGAGAGTTG +
Preference number: 4 (lower is better)
Translates to: PGNTTGTGHSESSQTRSEQERLG*AILGEL
Trigger: CAACTCTCCCAAAATGGCTCAGCCTAACCTCTCCTG...CTCAGAGCGGGTCTGGGAAGATTCAGAATGTCCGGTCCCTGTGGTGTTGCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS-3UTR TCA 90 bp GGACGAGGCAGGTGTATTAGGAGGGTCAGCGAACTGGGGCCCAAACCTGGTTTGAGGAGCCACGAAGCCTaGGGTCCATTTTTCCTTGCT +
Preference number: 4 (lower is better)
Translates to: GRGRCIRRVSELGPKPGLRSHEA*GPFFLA
Trigger: AGCAAGGAAAAATGGACCTCAGGCTTCGTGGCTCCT...CAAACCAGGTTTGGGCCCCAGTTCGCTGACCCTCCTAATACACCTGCCTCGTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS-3UTR TCA 90 bp CCTCAGGGCTCCTGGAAGGTGTCTGCCGCTCAGGAGGTCAGCACAGCCTCCTGTACCACTATGTCCTCGTaGCTTTATTTTTGCTACCCC +
Preference number: 4 (lower is better)
Translates to: PQGSWKVSAAQEVSTASCTTMSS*LYFCYP
Trigger: GGGGTAGCAAAAATAAAGTCACGAGGACATAGTGGT...ACAGGAGGCTGTGCTGACCTCCTGAGCGGCAGACACCTTCCAGGAGCCCTGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS-3UTR TCA 90 bp TGGGTGTGTCCTGGCAGTGTGGAGTGTCCTGGATGGGCTCTGCTCAGCCCCCTGACAATATTCAGAAACTaGCTGAGGAAGATGCACGGG +
Preference number: 4 (lower is better)
Translates to: WVCPGSVECPGWALLSPLTIFRN*LRKMHG
Trigger: CCCGTGCATCTTCCTCAGTCAGTTTCTGAATATTGT...CAGGGGGCTGAGCAGAGCCCATCCAGGACACTCCACACTGCCAGGACACACCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS-3UTR TCA 90 bp GGACGAGGCAGGTGTATTAGGAGGGTCAGCGAACTGGGGCCCAAACCTGGTTTGATAAGCACTCTGGCGTaGACAGTCTTCTCAGCGCTC +
Preference number: 4 (lower is better)
Translates to: GRGRCIRRVSELGPKPGLISTLA*TVFSAL
Trigger: GAGCGCTGAGAAGACTGTTCACGCCAGAGTGCTTAT...CAAACCAGGTTTGGGCCCCAGTTCGCTGACCCTCCTAATACACCTGCCTCGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS-3UTR GCA 90 bp TTTTCTCGAGGCCGTGCTTGTCTGAGGCCAACCAGGGACCAGGAGGCAGCGTCCAGGAATGTAATGAAGTaGGAGGTGACAGAGTCCCTG +
Preference number: 4 (lower is better)
Translates to: FSRGRACLRPTRDQEAASRNVMK*EVTESL
Trigger: CAGGGACTCTGTCACCTCGCACTTCATTACATTCCT...GGACGCTGCCTCCTGGTCCCTGGTTGGCCTCAGACAAGCACGGCCTCGAGAAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS-3UTR GCA 90 bp GCCACCCTGTTTGGTGACCACTCGTCCTCGGCCTTTTCAACACAAGGGCTTTGGAGCACAGCCTCCTGTTaGCATGACAGCCAGCTGCTT +
Preference number: 4 (lower is better)
Translates to: ATLFGDHSSSAFSTQGLWSTASC*HDSQLL
Trigger: AAGCAGCTGGCTGTCATGGCAACAGGAGGCTGTGCT...CCAAAGCCCTTGTGTTGAAAAGGCCGAGGACGAGTGGTCACCAAACAGGGTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS-3UTR GCA 90 bp GGACGAGGCAGGTGTATTAGGAGGGTCAGCGAACTGGGGCCCAAACCTGGTTTGTCCGTGTTAGTTGCCTaGTGGTTGGGGTTAGCTCCT +
Preference number: 4 (lower is better)
Translates to: GRGRCIRRVSELGPKPGLSVLVA*WLGLAP
Trigger: AGGAGCTAACCCCAACCAGCAGGCAACTAACACGGA...CAAACCAGGTTTGGGCCCCAGTTCGCTGACCCTCCTAATACACCTGCCTCGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS-3UTR GCA 90 bp CCTAAAGGAGCCACGAAGCCTGAGGTCCATTTTTCCTTGCTCTTTATTTCCAGGCCTGGCGAGCCTCTGTaGCTGCCGTGCGGTGTGAGG +
Preference number: 4 (lower is better)
Translates to: PKGATKPEVHFSLLFISRPGEPL*LPCGVR
Trigger: CCTCACACCGCACGGCAGGCACAGAGGCTCGCCAGG...CCTGGAAATAAAGAGCAAGGAAAAATGGACCTCAGGCTTCGTGGCTCCTTTAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS-3UTR CCA 90 bp GAAATGGCTGAGGACGAGGCAGGTGTATTAGGAGGGTCAGCGAACTGGGGCCCACGGGCTAACAGGCTCTaGAAAAGTTTCCCCAGGACT +
Preference number: 4 (lower is better)
Translates to: EMAEDEAGVLGGSANWGPRANRL*KSFPRT
Trigger: AGTCCTGGGGAAACTTTTCCAGAGCCTGTTAGCCCG...TGGGCCCCAGTTCGCTGACCCTCCTAATACACCTGCCTCGTCCTCAGCCATTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS-3UTR CCA 90 bp CTCGTCCCCACAGACCGGATCAGGGCCTGGCGAGCCTCTGTGCCTGCCGTGCGGTTAGTAGAAGCTAATTaGCAGTGCATAAAAACATGC +
Preference number: 4 (lower is better)
Translates to: LVPTDRIRAWRASVPAVRLVEAN*QCIKTC
Trigger: GCATGTTTTTATGCACTGCCAATTAGCTTCTACTAA...CCGCACGGCAGGCACAGAGGCTCGCCAGGCCCTGATCCGGTCTGTGGGGACGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS-3UTR CCA 90 bp CCTCAGGGCTCCTGGAAGGTGTCTGCCGCTCAGGAGGTCAGCACAGCCTCCTGTAGACATCAGCAGAAGTaGCTTTCAGAGTCAGAACAG +
Preference number: 4 (lower is better)
Translates to: PQGSWKVSAAQEVSTASCRHQQK*LSESEQ
Trigger: CTGTTCTGACTCTGAAAGCCACTTCTGCTGATGTCT...ACAGGAGGCTGTGCTGACCTCCTGAGCGGCAGACACCTTCCAGGAGCCCTGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS-3UTR TCA 90 bp GTTGTTTTCAAATGTTTCCGCACGTTAGTTCTGCCTTTCACACGCGGTCCAGCCTCGTCACCCCTGAGATaGTGGGCGCCTTGCCCTCGA +
Preference number: 4 (lower is better)
Translates to: VVFKCFRTLVLPFTRGPASSPLR*WAPCPR
Trigger: TCGAGGGCAAGGCGCCCATCATCTCAGGGGTGACGA...GGCTGGACCGCGTGTGAAAGGCAGAACTAACGTGCGGAAACATTTGAAAACAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS-3UTR TCA 90 bp TTACCTAGGTTGCCCTTGGCACAGAGCTGGCCTGTAGGCATGTGTGCACAGGTGTCGTCTGTGATCGGGTaGTTCCGAACCGCACATTCA +
Preference number: 4 (lower is better)
Translates to: LPRLPLAQSWPVGMCAQVSSVIG*FRTAHS
Trigger: TGAATGTGCGGTTCGGAATCACCCGATCACAGACGA...CACCTGTGCACACATGCCTACAGGCCAGCTCTGTGCCAAGGGCAACCTAGGTAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS-3UTR TCA 90 bp GCAGGCTCATCCGCAGGTAGACTCCAGAACCACGGCCCAGCAGGTCACACGTGTGTCACACTGATAAAGTaGTGCACTCAGTACTCCCTA +
Preference number: 4 (lower is better)
Translates to: AGSSAGRLQNHGPAGHTCVTLIK*CTQYSL
Trigger: TAGGGAGTACTGAGTGCATCACTTTATCAGTGTGAC...ACACGTGTGACCTGCTGGGCCGTGGTTCTGGAGTCTACCTGCGGATGAGCCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS-3UTR GCA 90 bp GTTGTTTTCAAATGTTTCCGCACGTTAGTTCTGCCTTTCACACGCGGTCCAGCCGGAGCGGGGGCTACTTaGCCCCTTGCACCTTCTGGT +
Preference number: 4 (lower is better)
Translates to: VVFKCFRTLVLPFTRGPAGAGAT*PLAPSG
Trigger: ACCAGAAGGTGCAAGGGGGCAAGTAGCCCCCGCTCC...GGCTGGACCGCGTGTGAAAGGCAGAACTAACGTGCGGAAACATTTGAAAACAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS-3UTR CCA 90 bp TTACCTAGGTTGCCCTTGGCACAGAGCTGGCCTGTAGGCATGTGTGCACAGGTGCCTGTCCCTCTCTCCTaGTTTGCAGGTTGTGCAGTT +
Preference number: 4 (lower is better)
Translates to: LPRLPLAQSWPVGMCAQVPVPLS*FAGCAV
Trigger: AACTGCACAACCTGCAAACCAGGAGAGAGGGACAGG...CACCTGTGCACACATGCCTACAGGCCAGCTCTGTGCCAAGGGCAACCTAGGTAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360578.7
3UTR CAA 72 bp AGATGGGAGCCGAGTGGGTGTTTTCAAAGATTCGCTTaGGAGCTGAGTGGAGAAGGGTGCTCTCCTGGCTCC +
Preference number: 4 (lower is better)
Translates to: RWEPSGCFQRFA*ELSGEGCSPGS
Trigger: GGAGCCAGGAGAGCACCCTTCTCCACTCAGCTCCAAAGCGAATCTTTGAAAACACCCACTCGGCTCCCATCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS-3UTR TCA 90 bp GGGCCAGTAGAGGGACAGGTAAGTGTCCAGGGCCAAGGCATCTCCATCTCAACTCCATTTTGGGAGAGTTaGAGAAGGTGCTTGGGCTGT +
Preference number: 4 (lower is better)
Translates to: GPVEGQVSVQGQGISISTPFWES*RRCLGC
Trigger: ACAGCCCAAGCACCTTCTTCAACTCTCCCAAAATGG...AGTTGAGATGGAGATGCCTTGGCCCTGGACACTTACCTGTCCCTCTACTGGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS-3UTR TCA 90 bp CCTAAAGGAGCCACGAAGCCTGAGGTCCATTTTTCCTTGCTCTTTATTTCCAGGCCCAGGCCGGTGAGGTaGCATCCTAAAGGAGCCACG +
Preference number: 4 (lower is better)
Translates to: PKGATKPEVHFSLLFISRPRPVR*HPKGAT
Trigger: CGTGGCTCCTTTAGGATGTCACCTCACCGGCCTGGG...CCTGGAAATAAAGAGCAAGGAAAAATGGACCTCAGGCTTCGTGGCTCCTTTAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS-3UTR TCA 90 bp CCTGGCAACACCACAGGGACCGGACATTCTGAATCTTCCCAGACCCGCTCTGAGTATTCAGAAACTGACTaGGGAAGATGCACGGGTCTG +
Preference number: 4 (lower is better)
Translates to: PGNTTGTGHSESSQTRSEYSETD*GRCTGL
Trigger: CAGACCCGTGCATCTTCCTCAGTCAGTTTCTGAATA...CTCAGAGCGGGTCTGGGAAGATTCAGAATGTCCGGTCCCTGTGGTGTTGCCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS-3UTR GCA 90 bp AGATGCAATTACGGATTCCACAGACAAGTTGTAACTGACAGTGGTGACCACTATGCCCTCAGCGGACCATaGTGGCTGGGAGCTCCGCCC +
Preference number: 4 (lower is better)
Translates to: RCNYGFHRQVVTDSGDHYALSGP*WLGAPP
Trigger: GGGCGGAGCTCCCAGCCAGCATGGTCCGCTGAGGGC...ATAGTGGTCACCACTGTCAGTTACAACTTGTCTGTGGAATCCGTAATTGCATCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS-3UTR TCA 90 bp GTTGTTTTCAAATGTTTCCGCACGTTAGTTCTGCCTTTCACACGCGGTCCAGCCAGGGACCGGACATTCTaGATCTTCCCAGACCCGCTC +
Preference number: 4 (lower is better)
Translates to: VVFKCFRTLVLPFTRGPARDRTF*IFPDPL
Trigger: GAGCGGGTCTGGGAAGATTCAGAATGTCCGGTCCCT...GGCTGGACCGCGTGTGAAAGGCAGAACTAACGTGCGGAAACATTTGAAAACAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS-3UTR GCA 90 bp AAACCACGTGCCCAGTGTGGTGTGATCCGCGAGACACTTTGGAAATGGCTGAGGTATGTGCAGTGGGGCTaGCGTCCAAACAATGTTCTG +
Preference number: 4 (lower is better)
Translates to: KPRAQCGVIRETLWKWLRYVQWG*RPNNVL
Trigger: CAGAACATTGTTTGGACGGCAGCCCCACTGCACATA...CCTCAGCCATTTCCAAAGTGTCTCGCGGATCACACCACACTGGGCACGTGGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS-3UTR CCA 90 bp GTTGTTTTCAAATGTTTCCGCACGTTAGTTCTGCCTTTCACACGCGGTCCAGCCGTCAGCCATGTTGCTTaGAGACGCAGCGACTGCAGC +
Preference number: 4 (lower is better)
Translates to: VVFKCFRTLVLPFTRGPAVSHVA*RRSDCS
Trigger: GCTGCAGTCGCTGCGTCTCCAAGCAACATGGCTGAC...GGCTGGACCGCGTGTGAAAGGCAGAACTAACGTGCGGAAACATTTGAAAACAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS-3UTR CCA 90 bp GTTGTTTTCAAATGTTTCCGCACGTTAGTTCTGCCTTTCACACGCGGTCCAGCCTTCGTGTCTCTTGCCTaGCAACACCACAGGGACCGG +
Preference number: 4 (lower is better)
Translates to: VVFKCFRTLVLPFTRGPAFVSLA*QHHRDR
Trigger: CCGGTCCCTGTGGTGTTGCCAGGCAAGAGACACGAA...GGCTGGACCGCGTGTGAAAGGCAGAACTAACGTGCGGAAACATTTGAAAACAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS-3UTR CCA 90 bp GAAATGGCTGAGGACGAGGCAGGTGTATTAGGAGGGTCAGCGAACTGGGGCCCATCAACACAAGGGCTTTaGAGTTGTGATGGGCTGTTA +
Preference number: 4 (lower is better)
Translates to: EMAEDEAGVLGGSANWGPSTQGL*SCDGLL
Trigger: TAACAGCCCATCACAACTCCAAAGCCCTTGTGTTGA...TGGGCCCCAGTTCGCTGACCCTCCTAATACACCTGCCTCGTCCTCAGCCATTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS-3UTR TCA 90 bp AGATGCAATTACGGATTCCACAGACAAGTTGTAACTGACAGTGGTGACCACTATTGGAGGCTTCTCTGTTaGGGGGCCTCGGAGACCGCC +
Preference number: 4 (lower is better)
Translates to: RCNYGFHRQVVTDSGDHYWRLLC*GASETA
Trigger: GGCGGTCTCCGAGGCCCCTCAACAGAGAAGCCTCCA...ATAGTGGTCACCACTGTCAGTTACAACTTGTCTGTGGAATCCGTAATTGCATCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS-3UTR GCA 90 bp GTTGTTTTCAAATGTTTCCGCACGTTAGTTCTGCCTTTCACACGCGGTCCAGCCAACGCCCCTTTGACCTaGAAACCACGTGCCCAGTGT +
Preference number: 4 (lower is better)
Translates to: VVFKCFRTLVLPFTRGPANAPLT*KPRAQC
Trigger: ACACTGGGCACGTGGTTTGCAGGTCAAAGGGGCGTT...GGCTGGACCGCGTGTGAAAGGCAGAACTAACGTGCGGAAACATTTGAAAACAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS-3UTR GCA 90 bp CCTAAAGGAGCCACGAAGCCTGAGGTCCATTTTTCCTTGCTCTTTATTTCCAGGGACGTCCGCGGTGAGTaGGGTTTAGACATCAGCAGA +
Preference number: 4 (lower is better)
Translates to: PKGATKPEVHFSLLFISRDVRGE*GLDISR
Trigger: TCTGCTGATGTCTAAACCGCACTCACCGCGGACGTC...CCTGGAAATAAAGAGCAAGGAAAAATGGACCTCAGGCTTCGTGGCTCCTTTAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS-3UTR CCA 90 bp CGCCCAAACTTGGACAGGATATTAGAAGGTGTAAAAGTAGTCCAGTATAAATATGCATCTCCCTCCCGGTaGCCCTGGCGTCCCCGTGCA +
Preference number: 4 (lower is better)
Translates to: RPNLDRILEGVKVVQYKYASPSR*PWRPRA
Trigger: TGCACGGGGACGCCAGGGCCACCGGGAGGGAGATGC...ATATTTATACTGGACTACTTTTACACCTTCTAATATCCTGTCCAAGTTTGGGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS-3UTR CCA 90 bp GTTGTTTTCAAATGTTTCCGCACGTTAGTTCTGCCTTTCACACGCGGTCCAGCCGTTGAAGAAGGTGCTTaGGCTGTGGCAATGGGAGGT +
Preference number: 4 (lower is better)
Translates to: VVFKCFRTLVLPFTRGPAVEEGA*AVAMGG
Trigger: ACCTCCCATTGCCACAGCCCAAGCACCTTCTTCAAC...GGCTGGACCGCGTGTGAAAGGCAGAACTAACGTGCGGAAACATTTGAAAACAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360578.7
3UTR CAA 72 bp AGTGTGCACACAGACACGAGCTGTTTCACTACAGGTTaGCAAGCCAGGCTCAACAGCAAGTCCAACAGGCAA +
Preference number: 4 (lower is better)
Translates to: SVHTDTSCFTTG*QARLNSKSNRQ
Trigger: TTGCCTGTTGGACTTGCTGTTGAGCCTGGCTTGCAAACCTGTAGTGAAACAGCTCGTGTCTGTGTGCACACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS-3UTR TCA 90 bp CGCCCAAACTTGGACAGGATATTAGAAGGTGTAAAAGTAGTCCAGTATAAATATCACCCTCCTGTACTGTaGGCCTGGCCCTGGGCAGCC +
Preference number: 4 (lower is better)
Translates to: RPNLDRILEGVKVVQYKYHPPVL*AWPWAA
Trigger: GGCTGCCCAGGGCCAGGCTCACAGTACAGGAGGGTG...ATATTTATACTGGACTACTTTTACACCTTCTAATATCCTGTCCAAGTTTGGGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS-3UTR CCA 90 bp CGCCCAAACTTGGACAGGATATTAGAAGGTGTAAAAGTAGTCCAGTATAAATATGACCGGATCAGGGCCTaGCGAGCCTCTGTGCCTGCC +
Preference number: 4 (lower is better)
Translates to: RPNLDRILEGVKVVQYKYDRIRA*RASVPA
Trigger: GGCAGGCACAGAGGCTCGCCAGGCCCTGATCCGGTC...ATATTTATACTGGACTACTTTTACACCTTCTAATATCCTGTCCAAGTTTGGGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS-3UTR CCA 90 bp GTTGTTTTCAAATGTTTCCGCACGTTAGTTCTGCCTTTCACACGCGGTCCAGCCGTCTGTTATGTGCAGTaGGGCTGCCGTCCAAACAAT +
Preference number: 4 (lower is better)
Translates to: VVFKCFRTLVLPFTRGPAVCYVQ*GCRPNN
Trigger: ATTGTTTGGACGGCAGCCCCACTGCACATAACAGAC...GGCTGGACCGCGTGTGAAAGGCAGAACTAACGTGCGGAAACATTTGAAAACAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360578.7
3UTR CAA 72 bp GATGCAGGTTCAGTGTTTGAAGGACGTTCTAGCCTATaGATAACATCACGGTCCAGCCTCATCTTCCCCCTG +
Preference number: 4 (lower is better)
Translates to: DAGSVFEGRSSL*ITSRSSLIFPL
Trigger: CAGGGGGAAGATGAGGCTGGACCGTGATGTTATCAATAGGCTAGAACGTCCTTCAAACACTGAACCTGCATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS-3UTR GCA 90 bp AGATGCAATTACGGATTCCACAGACAAGTTGTAACTGACAGTGGTGACCACTATAGCGCCTCCTGGAACTaGTCAAAGGTGATGGTCCGG +
Preference number: 4 (lower is better)
Translates to: RCNYGFHRQVVTDSGDHYSASWN*SKVMVR
Trigger: CCGGACCATCACCTTTGAGCAGTTCCAGGAGGCGCT...ATAGTGGTCACCACTGTCAGTTACAACTTGTCTGTGGAATCCGTAATTGCATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS-3UTR GCA 90 bp GTGTGGGGCCAATTCCGTGTTAGTTGCCTGCTGGTTGGGGTTAGCTCCTGCCACGTTTCTCTTAAGTTGTaGAGATTTCCTTTGTGGTTT +
Preference number: 4 (lower is better)
Translates to: VWGQFRVSCLLVGVSSCHVSLKL*RFPLWF
Trigger: AAACCACAAAGGAAATCTGCACAACTTAAGAGAAAC...GTGGCAGGAGCTAACCCCAACCAGCAGGCAACTAACACGGAATTGGCCCCACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360578.7
3UTR CAA 72 bp ATGATGCCAGCCCAACTCCACCATCTGCGCCCAAACTaGGACAGGATATTAGAAGGTGTAAAAGTAGTCCAG +
Preference number: 4 (lower is better)
Translates to: MMPAQLHHLRPN*DRILEGVKVVQ
Trigger: CTGGACTACTTTTACACCTTCTAATATCCTGTCCAAGTTTGGGCGCAGATGGTGGAGTTGGGCTGGCATCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS-3UTR TCA 90 bp AGATGCAATTACGGATTCCACAGACAAGTTGTAACTGACAGTGGTGACCACTATGAGTCAGAACAGCCATaGCGTGGACATCACCCGTCA +
Preference number: 4 (lower is better)
Translates to: RCNYGFHRQVVTDSGDHYESEQP*RGHHPS
Trigger: TGACGGGTGATGTCCACGTCATGGCTGTTCTGACTC...ATAGTGGTCACCACTGTCAGTTACAACTTGTCTGTGGAATCCGTAATTGCATCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS-3UTR GCA 90 bp CGCCCAAACTTGGACAGGATATTAGAAGGTGTAAAAGTAGTCCAGTATAAATATAACCCCCACAGACACTaGAGGACTGGGGGTCCTCCC +
Preference number: 4 (lower is better)
Translates to: RPNLDRILEGVKVVQYKYNPHRH*RTGGPP
Trigger: GGGAGGACCCCCAGTCCTGCAGTGTCTGTGGGGGTT...ATATTTATACTGGACTACTTTTACACCTTCTAATATCCTGTCCAAGTTTGGGCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS-3UTR GCA 90 bp AGATGCAATTACGGATTCCACAGACAAGTTGTAACTGACAGTGGTGACCACTATTCACCTGGCAGTCCTTaGACAGCTTCGACCAGTTCT +
Preference number: 4 (lower is better)
Translates to: RCNYGFHRQVVTDSGDHYSPGSP*TASTSS
Trigger: AGAACTGGTCGAAGCTGTGCAAGGACTGCCAGGTGA...ATAGTGGTCACCACTGTCAGTTACAACTTGTCTGTGGAATCCGTAATTGCATCT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS-3UTR CCA 90 bp CGCCCAAACTTGGACAGGATATTAGAAGGTGTAAAAGTAGTCCAGTATAAATATACCACGTGCCCAGTGTaGTGTGATCCGCGAGACACT +
Preference number: 4 (lower is better)
Translates to: RPNLDRILEGVKVVQYKYTTCPV*CDPRDT
Trigger: AGTGTCTCGCGGATCACACCACACTGGGCACGTGGT...ATATTTATACTGGACTACTTTTACACCTTCTAATATCCTGTCCAAGTTTGGGCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS-3UTR CCA 90 bp CGCCCAAACTTGGACAGGATATTAGAAGGTGTAAAAGTAGTCCAGTATAAATATCAGGGCGAGGTCCTCTaGAGTCATGTTCGTTCTGCG +
Preference number: 4 (lower is better)
Translates to: RPNLDRILEGVKVVQYKYQGEVL*SHVRSA
Trigger: CGCAGAACGAACATGACTCCAGAGGACCTCGCCCTG...ATATTTATACTGGACTACTTTTACACCTTCTAATATCCTGTCCAAGTTTGGGCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS-3UTR GCA 90 bp AGATGCAATTACGGATTCCACAGACAAGTTGTAACTGACAGTGGTGACCACTATCCCTCTCTCCTGGTTTaGAGGTTGTGCAGTTTGTTA +
Preference number: 4 (lower is better)
Translates to: RCNYGFHRQVVTDSGDHYPSLLV*RLCSLL
Trigger: TAACAAACTGCACAACCTGCAAACCAGGAGAGAGGG...ATAGTGGTCACCACTGTCAGTTACAACTTGTCTGTGGAATCCGTAATTGCATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS-3UTR GCA 90 bp AGATGCAATTACGGATTCCACAGACAAGTTGTAACTGACAGTGGTGACCACTATGTTTCACTACAGGTTTaGAAGCCAGGCTCAACAGCA +
Preference number: 4 (lower is better)
Translates to: RCNYGFHRQVVTDSGDHYVSLQV*KPGSTA
Trigger: TGCTGTTGAGCCTGGCTTGCAAACCTGTAGTGAAAC...ATAGTGGTCACCACTGTCAGTTACAACTTGTCTGTGGAATCCGTAATTGCATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS-3UTR GCA 90 bp CCTAAAGGAGCCACGAAGCCTGAGGTCCATTTTTCCTTGCTCTTTATTTCCAGGCTGGTTTGCAGGTTGTaGAGTTTGTTATTCACAAAT +
Preference number: 4 (lower is better)
Translates to: PKGATKPEVHFSLLFISRLVCRL*SLLFTN
Trigger: ATTTGTGAATAACAAACTGCACAACCTGCAAACCAG...CCTGGAAATAAAGAGCAAGGAAAAATGGACCTCAGGCTTCGTGGCTCCTTTAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS-3UTR GCA 90 bp CGCCCAAACTTGGACAGGATATTAGAAGGTGTAAAAGTAGTCCAGTATAAATATAAGAGAACACACACCTaGCTGAATTCACAATATTCA +
Preference number: 4 (lower is better)
Translates to: RPNLDRILEGVKVVQYKYKRTHT*LNSQYS
Trigger: TGAATATTGTGAATTCAGGCAGGTGTGTGTTCTCTT...ATATTTATACTGGACTACTTTTACACCTTCTAATATCCTGTCCAAGTTTGGGCG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS-3UTR CAA 90 bp GAGGACCCGCGGACCCCAACCCGCCCTTCCCTCCGTCCTGACCCGGCGCCAGGCGCCTTGCCCTTGCCCTaGCCAGAGGGGTCGAAGCGC +
Preference number: 5 (lower is better)
Translates to: EDPRTPTRPSLRPDPAPGALPLP*PEGSKR
Trigger: GCGCTTCGACCCCTCTGGCAAGGGCAAGGGCAAGGC...GCCTGGCGCCGGGTCAGGACGGAGGGAAGGGCGGGTTGGGGTCCGCGGGTCCTC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS GCA 90 bp GCGCCGGAAGGCCTCCTCCAGGGCACTGAGCTCAGGGGATGCGGCTaGCCCCTCACCAGCACCCTCCGATTCCAGCGACAGCCTCTTGGC +
Preference number: 5 (lower is better)
Translates to: APEGLLQGTELRGCG*PLTSTLRFQRQPLG
Trigger: GCCAAGAGGCTGTCGCTGGAATCGGAGGGTGCTGGTGAGGGGGCAGCCGCATCCCCTGAGCTCAGTGCCCTGGAGGAGGCCTTCCGGCGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS-3UTR CAA 90 bp GAGGACCCGCGGACCCCAACCCGCCCTTCCCTCCGTCCTGACCCGGCGCCAGGCGCCTTGTCAGCCATGTaGCTTGGAGACGCAGCGACT +
Preference number: 5 (lower is better)
Translates to: EDPRTPTRPSLRPDPAPGALSAM*LGDAAT
Trigger: AGTCGCTGCGTCTCCAAGCAACATGGCTGACAAGGC...GCCTGGCGCCGGGTCAGGACGGAGGGAAGGGCGGGTTGGGGTCCGCGGGTCCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS GCA 90 bp GGCAAAGCGCCGGAAGGCCTCCTCCAGGGCACTGAGCTCAGGGGATaGGGCTGCCCCCTCACCAGCACCCTCCGATTCCAGCGACAGCCT +
Preference number: 5 (lower is better)
Translates to: GKAPEGLLQGTELRG*GCPLTSTLRFQRQP
Trigger: AGGCTGTCGCTGGAATCGGAGGGTGCTGGTGAGGGGGCAGCCGCATCCCCTGAGCTCAGTGCCCTGGAGGAGGCCTTCCGGCGCTTTGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS-3UTR CAA 90 bp TCGTCCCCACAGACCGGATCAGGGCCTGGCGAGCCTCTGTGCCTGCCGTGCGGTGGGCCCAAACCTGGTTaGAGAGGGGAGTGCTGGGGG +
Preference number: 5 (lower is better)
Translates to: SSPQTGSGPGEPLCLPCGGPKPG*RGECWG
Trigger: CCCCCAGCACTCCCCTCTCAAACCAGGTTTGGGCCC...ACCGCACGGCAGGCACAGAGGCTCGCCAGGCCCTGATCCGGTCTGTGGGGACGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS-3UTR CAA 90 bp TCGTCCCCACAGACCGGATCAGGGCCTGGCGAGCCTCTGTGCCTGCCGTGCGGTGTGGAGGCTTCTCTGTaGAGGGGCCTCGGAGACCGC +
Preference number: 5 (lower is better)
Translates to: SSPQTGSGPGEPLCLPCGVEASL*RGLGDR
Trigger: GCGGTCTCCGAGGCCCCTCAACAGAGAAGCCTCCAC...ACCGCACGGCAGGCACAGAGGCTCGCCAGGCCCTGATCCGGTCTGTGGGGACGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS-3UTR CAA 90 bp CTCGTCCCCACAGACCGGATCAGGGCCTGGCGAGCCTCTGTGCCTGCCGTGCGGGTGCTCCCGATGCGCTaGGCTCTTTTCTCGAGGCCG +
Preference number: 5 (lower is better)
Translates to: LVPTDRIRAWRASVPAVRVLPMR*ALFSRP
Trigger: CGGCCTCGAGAAAAGAGCCAAGCGCATCGGGAGCAC...CCGCACGGCAGGCACAGAGGCTCGCCAGGCCCTGATCCGGTCTGTGGGGACGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS-3UTR CAA 90 bp TCGTCCCCACAGACCGGATCAGGGCCTGGCGAGCCTCTGTGCCTGCCGTGCGGTAGCTTCGACCAGTTCTaGCCGTGCATCTCCCTCCCG +
Preference number: 5 (lower is better)
Translates to: SSPQTGSGPGEPLCLPCGSFDQF*PCISLP
Trigger: CGGGAGGGAGATGCACGGCAAGAACTGGTCGAAGCT...ACCGCACGGCAGGCACAGAGGCTCGCCAGGCCCTGATCCGGTCTGTGGGGACGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS-3UTR CAA 90 bp CTCGTCCCCACAGACCGGATCAGGGCCTGGCGAGCCTCTGTGCCTGCCGTGCGGATCACCTGGCAGTCCTaGCACAGCTTCGACCAGTTC +
Preference number: 5 (lower is better)
Translates to: LVPTDRIRAWRASVPAVRITWQS*HSFDQF
Trigger: GAACTGGTCGAAGCTGTGCAAGGACTGCCAGGTGAT...CCGCACGGCAGGCACAGAGGCTCGCCAGGCCCTGATCCGGTCTGTGGGGACGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS-3UTR CAA 90 bp GCAGGCTCATCCGCAGGTAGACTCCAGAACCACGGCCCAGCAGGTCACACGTGTGGGGAGCCACCCTGTTaGGTGACCACTCGTCCTCGG +
Preference number: 5 (lower is better)
Translates to: AGSSAGRLQNHGPAGHTCGEPPC*VTTRPR
Trigger: CCGAGGACGAGTGGTCACCAAACAGGGTGGCTCCCC...ACACGTGTGACCTGCTGGGCCGTGGTTCTGGAGTCTACCTGCGGATGAGCCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS GCA 90 bp CATGGAGCGGGGGCTACTTGCCCCCTTGCACCTTCTGGTCGTAGGTaGCTGCGTGCTTGTAGCCGGACACATAGCCTGACTCGTCCACCA +
Preference number: 5 (lower is better)
Translates to: HGAGATCPLAPSGRR*LRACSRTHSLTRPP
Trigger: TGGTGGACGAGTCAGGCTATGTGTCCGGCTACAAGCACGCAGGCACCTACGACCAGAAGGTGCAAGGGGGCAAGTAGCCCCCGCTCCATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS-3UTR CAA 90 bp TTTTCTCGAGGCCGTGCTTGTCTGAGGCCAACCAGGGACCAGGAGGCAGCGTCCGGCACTTCGTGTCTCTaGCCTGGCAACACCACAGGG +
Preference number: 5 (lower is better)
Translates to: FSRGRACLRPTRDQEAASGTSCL*PGNTTG
Trigger: CCCTGTGGTGTTGCCAGGCAAGAGACACGAAGTGCC...GGACGCTGCCTCCTGGTCCCTGGTTGGCCTCAGACAAGCACGGCCTCGAGAAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS GCA 90 bp TTCGTCACCCCTGAGATGATGGGCGCCTTGCCCTCGATGAGCCTGTaGACCTCGCGAACGGCCTCCTCGCTGCTCTTGTCTTTGAATCGC +
Preference number: 5 (lower is better)
Translates to: FVTPEMMGALPSMSL*TSRTASSLLLSLNR
Trigger: GCGATTCAAAGACAAGAGCAGCGAGGAGGCCGTTCGCGAGGTGCACAGGCTCATCGAGGGCAAGGCGCCCATCATCTCAGGGGTGACGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS-3UTR CAA 90 bp GGGCCAGTAGAGGGACAGGTAAGTGTCCAGGGCCAAGGCATCTCCATCTCAACTTGGAGCGGGGGCTACTaGCCCCCTTGCACCTTCTGG +
Preference number: 5 (lower is better)
Translates to: GPVEGQVSVQGQGISISTWSGGY*PPCTFW
Trigger: CCAGAAGGTGCAAGGGGGCAAGTAGCCCCCGCTCCA...AGTTGAGATGGAGATGCCTTGGCCCTGGACACTTACCTGTCCCTCTACTGGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS-3UTR CAA 90 bp CCTCAGGGCTCCTGGAAGGTGTCTGCCGCTCAGGAGGTCAGCACAGCCTCCTGTGATCCGCGAGACACTTaGGAAATGGCTGAGGACGAG +
Preference number: 5 (lower is better)
Translates to: PQGSWKVSAAQEVSTASCDPRDT*EMAEDE
Trigger: CTCGTCCTCAGCCATTTCCAAAGTGTCTCGCGGATC...ACAGGAGGCTGTGCTGACCTCCTGAGCGGCAGACACCTTCCAGGAGCCCTGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS-3UTR CAA 90 bp CTCGTCCCCACAGACCGGATCAGGGCCTGGCGAGCCTCTGTGCCTGCCGTGCGGACCGCACATTCAGAGTaGTTTTCAAATGTTTCCGCA +
Preference number: 5 (lower is better)
Translates to: LVPTDRIRAWRASVPAVRTAHSE*FSNVSA
Trigger: TGCGGAAACATTTGAAAACAACTCTGAATGTGCGGT...CCGCACGGCAGGCACAGAGGCTCGCCAGGCCCTGATCCGGTCTGTGGGGACGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS-3UTR CAA 90 bp GAAATGGCTGAGGACGAGGCAGGTGTATTAGGAGGGTCAGCGAACTGGGGCCCATCCTCCCCACTCCACTaGTACAGCAGGAGCCACAGG +
Preference number: 5 (lower is better)
Translates to: EMAEDEAGVLGGSANWGPSSPLH*YSRSHR
Trigger: CCTGTGGCTCCTGCTGTACAAGTGGAGTGGGGAGGA...TGGGCCCCAGTTCGCTGACCCTCCTAATACACCTGCCTCGTCCTCAGCCATTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS-3UTR CAA 90 bp GCAGGCTCATCCGCAGGTAGACTCCAGAACCACGGCCCAGCAGGTCACACGTGTTCGCTGCTCTTGTCTTaGAATCGCTTCTTGGCGAGC +
Preference number: 5 (lower is better)
Translates to: AGSSAGRLQNHGPAGHTCSLLLS*NRFLAS
Trigger: GCTCGCCAAGAAGCGATTCAAAGACAAGAGCAGCGA...ACACGTGTGACCTGCTGGGCCGTGGTTCTGGAGTCTACCTGCGGATGAGCCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS-3UTR CAA 90 bp GGGCCAGTAGAGGGACAGGTAAGTGTCCAGGGCCAAGGCATCTCCATCTCAACTGGGCTACTTGCCCCCTaGCACCTTCTGGTCGTAGGT +
Preference number: 5 (lower is better)
Translates to: GPVEGQVSVQGQGISISTGLLAP*HLLVVG
Trigger: ACCTACGACCAGAAGGTGCAAGGGGGCAAGTAGCCC...AGTTGAGATGGAGATGCCTTGGCCCTGGACACTTACCTGTCCCTCTACTGGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS-3UTR CAA 90 bp TTACCTAGGTTGCCCTTGGCACAGAGCTGGCCTGTAGGCATGTGTGCACAGGTGTTCGTTCTGCGTGGCTaGGCCGTGACTGTGGGGACT +
Preference number: 5 (lower is better)
Translates to: LPRLPLAQSWPVGMCAQVFVLRG*AVTVGT
Trigger: AGTCCCCACAGTCACGGCCAAGCCACGCAGAACGAA...CACCTGTGCACACATGCCTACAGGCCAGCTCTGTGCCAAGGGCAACCTAGGTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS-3UTR CAA 90 bp GGGCCAGTAGAGGGACAGGTAAGTGTCCAGGGCCAAGGCATCTCCATCTCAACTTTCTCGAGGCCGTGCTaGTCTGAGGCCAACCAGGGA +
Preference number: 5 (lower is better)
Translates to: GPVEGQVSVQGQGISISTFSRPC*SEANQG
Trigger: TCCCTGGTTGGCCTCAGACAAGCACGGCCTCGAGAA...AGTTGAGATGGAGATGCCTTGGCCCTGGACACTTACCTGTCCCTCTACTGGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS-3UTR CAA 90 bp CTCCCCATCACATGCCCAGGGACAAACGCTGCACCCTGGACCACCAGAGCTCACCGGCAAGACTTCCCTTaGATCTTGCTGAAGACGATG +
Preference number: 5 (lower is better)
Translates to: LPITCPGTNAAPWTTRAHRQDFP*ILLKTM
Trigger: CATCGTCTTCAGCAAGATCAAAGGGAAGTCTTGCCG...GTGAGCTCTGGTGGTCCAGGGTGCAGCGTTTGTCCCTGGGCATGTGATGGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS-3UTR CAA 90 bp CTCTTCTCGTGCTCAGGGCCGGTTTCTGGTGTGCTCCCGATGCGCTTGGCTCTTGCCATTTTGGGAGAGTaGAAGAAGGTGCTTGGGCTG +
Preference number: 5 (lower is better)
Translates to: LFSCSGPVSGVLPMRLALAILGE*KKVLGL
Trigger: CAGCCCAAGCACCTTCTTCAACTCTCCCAAAATGGC...AAGAGCCAAGCGCATCGGGAGCACACCAGAAACCGGCCCTGAGCACGAGAAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS-3UTR CAA 90 bp CTCCCCATCACATGCCCAGGGACAAACGCTGCACCCTGGACCACCAGAGCTCACCTCGTGACTTTATTTTaGCTACCCCTCCTGGCTAGG +
Preference number: 5 (lower is better)
Translates to: LPITCPGTNAAPWTTRAHLVTLF*LPLLAR
Trigger: CCTAGCCAGGAGGGGTAGCAAAAATAAAGTCACGAG...GTGAGCTCTGGTGGTCCAGGGTGCAGCGTTTGTCCCTGGGCATGTGATGGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS-3UTR CAA 90 bp TTTTCTCGAGGCCGTGCTTGTCTGAGGCCAACCAGGGACCAGGAGGCAGCGTCCTGTTTCACTACAGGTTaGCAAGCCAGGCTCAACAGC +
Preference number: 5 (lower is better)
Translates to: FSRGRACLRPTRDQEAASCFTTG*QARLNS
Trigger: GCTGTTGAGCCTGGCTTGCAAACCTGTAGTGAAACA...GGACGCTGCCTCCTGGTCCCTGGTTGGCCTCAGACAAGCACGGCCTCGAGAAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS-3UTR CAA 90 bp TCGTCCCCACAGACCGGATCAGGGCCTGGCGAGCCTCTGTGCCTGCCGTGCGGTTGTCACTTTACCAACTaGACACACAATGTTAACGAC +
Preference number: 5 (lower is better)
Translates to: SSPQTGSGPGEPLCLPCGCHFTN*THNVND
Trigger: GTCGTTAACATTGTGTGTCAAGTTGGTAAAGTGACA...ACCGCACGGCAGGCACAGAGGCTCGCCAGGCCCTGATCCGGTCTGTGGGGACGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS-3UTR CAA 90 bp CCTGGCAACACCACAGGGACCGGACATTCTGAATCTTCCCAGACCCGCTCTGAGGCCTCCTCGCTGCTCTaGTCTTTGAATCGCTTCTTG +
Preference number: 5 (lower is better)
Translates to: PGNTTGTGHSESSQTRSEASSLL*SLNRFL
Trigger: CAAGAAGCGATTCAAAGACAAGAGCAGCGAGGAGGC...CTCAGAGCGGGTCTGGGAAGATTCAGAATGTCCGGTCCCTGTGGTGTTGCCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS-3UTR CAA 90 bp CCTAAAGGAGCCACGAAGCCTGAGGTCCATTTTTCCTTGCTCTTTATTTCCAGGTCCACGCGGCCAGCCTaGCCCTTGCCCTTGCCAGAG +
Preference number: 5 (lower is better)
Translates to: PKGATKPEVHFSLLFISRSTRPA*PLPLPE
Trigger: CTCTGGCAAGGGCAAGGGCAAGGCTGGCCGCGTGGA...CCTGGAAATAAAGAGCAAGGAAAAATGGACCTCAGGCTTCGTGGCTCCTTTAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS-3UTR CAA 90 bp GTGTGGGGCCAATTCCGTGTTAGTTGCCTGCTGGTTGGGGTTAGCTCCTGCCACGACTTCCCTTTGATCTaGCTGAAGACGATGTCCACG +
Preference number: 5 (lower is better)
Translates to: VWGQFRVSCLLVGVSSCHDFPLI*LKTMST
Trigger: CGTGGACATCGTCTTCAGCAAGATCAAAGGGAAGTC...GTGGCAGGAGCTAACCCCAACCAGCAGGCAACTAACACGGAATTGGCCCCACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS GCA 90 bp TCTTTGAATCGCTTCTTGGCGAGCTCCTCCAGCGCCTCCTGGAACTaGTCAAAGGTGATGGTCCGGCAAGACTTCCCTTTGATCTTGCTG +
Preference number: 5 (lower is better)
Translates to: SLNRFLASSSSASWN*SKVMVRQDFPLILL
Trigger: CAGCAAGATCAAAGGGAAGTCTTGCCGGACCATCACCTTTGAGCAGTTCCAGGAGGCGCTGGAGGAGCTCGCCAAGAAGCGATTCAAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS CCA 90 bp CTCTTGTCTTTGAATCGCTTCTTGGCGAGCTCCTCCAGCGCCTCCTaGAACTGCTCAAAGGTGATGGTCCGGCAAGACTTCCCTTTGATC +
Preference number: 5 (lower is better)
Translates to: LLSLNRFLASSSSAS*NCSKVMVRQDFPLI
Trigger: GATCAAAGGGAAGTCTTGCCGGACCATCACCTTTGAGCAGTTCCAGGAGGCGCTGGAGGAGCTCGCCAAGAAGCGATTCAAAGACAAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS-3UTR CAA 90 bp AAACCACGTGCCCAGTGTGGTGTGATCCGCGAGACACTTTGGAAATGGCTGAGGTTCGTTTTACCTAGGTaGCCCTTGGCACAGAGCTGG +
Preference number: 5 (lower is better)
Translates to: KPRAQCGVIRETLWKWLRFVLPR*PLAQSW
Trigger: CCAGCTCTGTGCCAAGGGCAACCTAGGTAAAACGAA...CCTCAGCCATTTCCAAAGTGTCTCGCGGATCACACCACACTGGGCACGTGGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS-3UTR CAA 90 bp CCTGGCAACACCACAGGGACCGGACATTCTGAATCTTCCCAGACCCGCTCTGAGCATCTGCGCCCAAACTaGGACAGGATATTAGAAGGT +
Preference number: 5 (lower is better)
Translates to: PGNTTGTGHSESSQTRSEHLRPN*DRILEG
Trigger: ACCTTCTAATATCCTGTCCAAGTTTGGGCGCAGATG...CTCAGAGCGGGTCTGGGAAGATTCAGAATGTCCGGTCCCTGTGGTGTTGCCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS-3UTR CAA 90 bp GGGCCAGTAGAGGGACAGGTAAGTGTCCAGGGCCAAGGCATCTCCATCTCAACTGGACGTTCTAGCCTATaGATAACATCACGGTCCAGC +
Preference number: 5 (lower is better)
Translates to: GPVEGQVSVQGQGISISTGRSSL*ITSRSS
Trigger: GCTGGACCGTGATGTTATCAATAGGCTAGAACGTCC...AGTTGAGATGGAGATGCCTTGGCCCTGGACACTTACCTGTCCCTCTACTGGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS-3UTR CAA 90 bp GCCACCCTGTTTGGTGACCACTCGTCCTCGGCCTTTTCAACACAAGGGCTTTGGTTTCAAAGATTCGCTTaGGAGCTGAGTGGAGAAGGG +
Preference number: 5 (lower is better)
Translates to: ATLFGDHSSSAFSTQGLWFQRFA*ELSGEG
Trigger: CCCTTCTCCACTCAGCTCCAAAGCGAATCTTTGAAA...CCAAAGCCCTTGTGTTGAAAAGGCCGAGGACGAGTGGTCACCAAACAGGGTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS-3UTR CAA 90 bp CTCCCCATCACATGCCCAGGGACAAACGCTGCACCCTGGACCACCAGAGCTCACTGCAGGTTGTGCAGTTaGTTATTCACAAATACACAT +
Preference number: 5 (lower is better)
Translates to: LPITCPGTNAAPWTTRAHCRLCS*LFTNTH
Trigger: ATGTGTATTTGTGAATAACAAACTGCACAACCTGCA...GTGAGCTCTGGTGGTCCAGGGTGCAGCGTTTGTCCCTGGGCATGTGATGGGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS-3UTR CAA 90 bp GTGTGGGGCCAATTCCGTGTTAGTTGCCTGCTGGTTGGGGTTAGCTCCTGCCACCAAGTTTCTCTTAAGTaGTGCAGATTTCCTTTGTGG +
Preference number: 5 (lower is better)
Translates to: VWGQFRVSCLLVGVSSCHQVSLK*CRFPLW
Trigger: CCACAAAGGAAATCTGCACAACTTAAGAGAAACTTG...GTGGCAGGAGCTAACCCCAACCAGCAGGCAACTAACACGGAATTGGCCCCACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS-3UTR CAA 90 bp CGCCCAAACTTGGACAGGATATTAGAAGGTGTAAAAGTAGTCCAGTATAAATATTGTCAGCCATGTTGCTaGGAGACGCAGCGACTGCAG +
Preference number: 5 (lower is better)
Translates to: RPNLDRILEGVKVVQYKYCQPCC*ETQRLQ
Trigger: CTGCAGTCGCTGCGTCTCCAAGCAACATGGCTGACA...ATATTTATACTGGACTACTTTTACACCTTCTAATATCCTGTCCAAGTTTGGGCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS-3UTR CAA 90 bp CGCCCAAACTTGGACAGGATATTAGAAGGTGTAAAAGTAGTCCAGTATAAATATTCTTTGAATCGCTTCTaGGCGAGCTCCTCCAGCGCC +
Preference number: 5 (lower is better)
Translates to: RPNLDRILEGVKVVQYKYSLNRF*ASSSSA
Trigger: GGCGCTGGAGGAGCTCGCCAAGAAGCGATTCAAAGA...ATATTTATACTGGACTACTTTTACACCTTCTAATATCCTGTCCAAGTTTGGGCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS-3UTR CAA 90 bp CGCCCAAACTTGGACAGGATATTAGAAGGTGTAAAAGTAGTCCAGTATAAATATATGCAGGTTCAGTGTTaGAAGGACGTTCTAGCCTAT +
Preference number: 5 (lower is better)
Translates to: RPNLDRILEGVKVVQYKYMQVQC*KDVLAY
Trigger: ATAGGCTAGAACGTCCTTCAAACACTGAACCTGCAT...ATATTTATACTGGACTACTTTTACACCTTCTAATATCCTGTCCAAGTTTGGGCG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS GCA 72 bp GGCCTCCTCCAGGGCACTGAGCTCAGGGGATGCGGCTaGCCCCTCACCAGCACCCTCCGATTCCAGCGACAG +
Preference number: 6 (lower is better)
Translates to: GLLQGTELRGCG*PLTSTLRFQRQ
Trigger: CTGTCGCTGGAATCGGAGGGTGCTGGTGAGGGGGCAGCCGCATCCCCTGAGCTCAGTGCCCTGGAGGAGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS GCA 72 bp ACCGGCAGTGCCGCGAGGCATGGAGCGGGGGCTACTTaGCCCCTTGCACCTTCTGGTCGTAGGTGCCTGCGT +
Preference number: 6 (lower is better)
Translates to: TGSAARHGAGAT*PLAPSGRRCLR
Trigger: ACGCAGGCACCTACGACCAGAAGGTGCAAGGGGGCAAGTAGCCCCCGCTCCATGCCTCGCGGCACTGCCGGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS CAA 90 bp ACACCGGCAGTGCCGCGAGGCATGGAGCGGGGGCTACTTGCCCCCTaGCACCTTCTGGTCGTAGGTGCCTGCGTGCTTGTAGCCGGACAC +
Preference number: 6 (lower is better)
Translates to: TPAVPRGMERGLLAP*HLLVVGACVLVAGH
Trigger: GTGTCCGGCTACAAGCACGCAGGCACCTACGACCAGAAGGTGCAAGGGGGCAAGTAGCCCCCGCTCCATGCCTCGCGGCACTGCCGGTGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS CAA 90 bp GTGGGCGACGAGATGGCTTTCGTCACCCCTGAGATGATGGGCGCCTaGCCCTCGATGAGCCTGTGCACCTCGCGAACGGCCTCCTCGCTG +
Preference number: 6 (lower is better)
Translates to: VGDEMAFVTPEMMGA*PSMSLCTSRTASSL
Trigger: CAGCGAGGAGGCCGTTCGCGAGGTGCACAGGCTCATCGAGGGCAAGGCGCCCATCATCTCAGGGGTGACGAAAGCCATCTCGTCGCCCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS CAA 72 bp GTGCCGCGAGGCATGGAGCGGGGGCTACTTGCCCCCTaGCACCTTCTGGTCGTAGGTGCCTGCGTGCTTGTA +
Preference number: 6 (lower is better)
Translates to: VPRGMERGLLAP*HLLVVGACVLV
Trigger: TACAAGCACGCAGGCACCTACGACCAGAAGGTGCAAGGGGGCAAGTAGCCCCCGCTCCATGCCTCGCGGCAC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS GCA 72 bp CCTGAGATGATGGGCGCCTTGCCCTCGATGAGCCTGTaGACCTCGCGAACGGCCTCCTCGCTGCTCTTGTCT +
Preference number: 6 (lower is better)
Translates to: PEMMGALPSMSL*TSRTASSLLLS
Trigger: AGACAAGAGCAGCGAGGAGGCCGTTCGCGAGGTGCACAGGCTCATCGAGGGCAAGGCGCCCATCATCTCAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS CAA 72 bp GAGATGGCTTTCGTCACCCCTGAGATGATGGGCGCCTaGCCCTCGATGAGCCTGTGCACCTCGCGAACGGCC +
Preference number: 6 (lower is better)
Translates to: EMAFVTPEMMGA*PSMSLCTSRTA
Trigger: GGCCGTTCGCGAGGTGCACAGGCTCATCGAGGGCAAGGCGCCCATCATCTCAGGGGTGACGAAAGCCATCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS CAA 90 bp CCCTCGATGAGCCTGTGCACCTCGCGAACGGCCTCCTCGCTGCTCTaGTCTTTGAATCGCTTCTTGGCGAGCTCCTCCAGCGCCTCCTGG +
Preference number: 6 (lower is better)
Translates to: PSMSLCTSRTASSLL*SLNRFLASSSSASW
Trigger: CCAGGAGGCGCTGGAGGAGCTCGCCAAGAAGCGATTCAAAGACAAGAGCAGCGAGGAGGCCGTTCGCGAGGTGCACAGGCTCATCGAGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS TCA 72 bp GCACCTCGCGAACGGCCTCCTCGCTGCTCTTGTCTTTaGATCGCTTCTTGGCGAGCTCCTCCAGCGCCTCCT +
Preference number: 6 (lower is better)
Translates to: APRERPPRCSCL*IASWRAPPAPP
Trigger: AGGAGGCGCTGGAGGAGCTCGCCAAGAAGCGATTCAAAGACAAGAGCAGCGAGGAGGCCGTTCGCGAGGTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS CAA 72 bp TGCACCTCGCGAACGGCCTCCTCGCTGCTCTTGTCTTaGAATCGCTTCTTGGCGAGCTCCTCCAGCGCCTCC +
Preference number: 6 (lower is better)
Translates to: CTSRTASSLLLS*NRFLASSSSAS
Trigger: GGAGGCGCTGGAGGAGCTCGCCAAGAAGCGATTCAAAGACAAGAGCAGCGAGGAGGCCGTTCGCGAGGTGCA
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS CAA 90 bp ATGAGCCTGTGCACCTCGCGAACGGCCTCCTCGCTGCTCTTGTCTTaGAATCGCTTCTTGGCGAGCTCCTCCAGCGCCTCCTGGAACTGC +
Preference number: 6 (lower is better)
Translates to: MSLCTSRTASSLLLS*NRFLASSSSASWNC
Trigger: GCAGTTCCAGGAGGCGCTGGAGGAGCTCGCCAAGAAGCGATTCAAAGACAAGAGCAGCGAGGAGGCCGTTCGCGAGGTGCACAGGCTCAT
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS GCA 72 bp GGGGCTACTTGCCCCCTTGCACCTTCTGGTCGTAGGTaGCTGCGTGCTTGTAGCCGGACACATAGCCTGACT +
Preference number: 6 (lower is better)
Translates to: GATCPLAPSGRR*LRACSRTHSLT
Trigger: AGTCAGGCTATGTGTCCGGCTACAAGCACGCAGGCACCTACGACCAGAAGGTGCAAGGGGGCAAGTAGCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS CAA 72 bp AGCCTGTGCACCTCGCGAACGGCCTCCTCGCTGCTCTaGTCTTTGAATCGCTTCTTGGCGAGCTCCTCCAGC +
Preference number: 6 (lower is better)
Translates to: SLCTSRTASSLL*SLNRFLASSSS
Trigger: GCTGGAGGAGCTCGCCAAGAAGCGATTCAAAGACAAGAGCAGCGAGGAGGCCGTTCGCGAGGTGCACAGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS GCA 72 bp CGCTTCTTGGCGAGCTCCTCCAGCGCCTCCTGGAACTaGTCAAAGGTGATGGTCCGGCAAGACTTCCCTTTG +
Preference number: 6 (lower is better)
Translates to: RFLASSSSASWN*SKVMVRQDFPL
Trigger: CAAAGGGAAGTCTTGCCGGACCATCACCTTTGAGCAGTTCCAGGAGGCGCTGGAGGAGCTCGCCAAGAAGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360578.7
CDS CAA 90 bp ACCTCGCGAACGGCCTCCTCGCTGCTCTTGTCTTTGAATCGCTTCTaGGCGAGCTCCTCCAGCGCCTCCTGGAACTGCTCAAAGGTGATG +
Preference number: 6 (lower is better)
Translates to: TSRTASSLLLSLNRF*ASSSSASWNCSKVM
Trigger: CATCACCTTTGAGCAGTTCCAGGAGGCGCTGGAGGAGCTCGCCAAGAAGCGATTCAAAGACAAGAGCAGCGAGGAGGCCGTTCGCGAGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360578.7