RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TPP2 (Homo sapiens)

Ensembl gene IDs: ENSG00000134900

Ensembl transcript IDs: ENST00000376052.5, ENST00000376065.8, ENST00000490010.1, ENST00000490420.1, ENST00000493770.2, ENST00000651448.1, ENST00000651544.1, ENST00000651748.1, ENST00000651921.1, ENST00000652033.1, ENST00000652308.1

Found 661 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CGTCCCTCTCAGTGTCCAGTTAGGAACAGAAGCAATGGCTCCTCCTaGCGCACTGATACTCACACCAAGGGCCCCGTCAGCACTAGGTCC +
Preference number: 1 (lower is better)
Translates to: RPSQCPVRNRSNGSS*RTDTHTKGPVSTRS
Trigger: GGACCTAGTGCTGACGGGGCCCTTGGTGTGAGTATCAGTGCGCCAGGAGGAGCCATTGCTTCTGTTCCTAACTGGACACTGAGAGGGACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651448.1
3UTR TCA 90 bp GGGCATCTACGAGGGTGGATTTTTGTTTGTCCATGTCACTGTGTCTaGGCACTCCTTTCATCCGTCGCTCGGCCAGAGTCTGCAGGGCAG +
Preference number: 1 (lower is better)
Translates to: GHLRGWIFVCPCHCV*ALLSSVARPESAGQ
Trigger: CTGCCCTGCAGACTCTGGCCGAGCGACGGATGAAAGGAGTGCTCAGACACAGTGACATGGACAAACAAAAATCCACCCTCGTAGATGCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651921.1
3UTR TCA 90 bp TTCTGTGTTCTCCGGAAATACAGGTTCAATGCCAACGCCATGATCTaGAGGTGCAGCCACCTGAACAGGATCTCGGAGGTAGATGCCACG +
Preference number: 1 (lower is better)
Translates to: FCVLRKYRFNANAMI*RCSHLNRISEVDAT
Trigger: CGTGGCATCTACCTCCGAGATCCTGTTCAGGTGGCTGCACCTTCAGATCATGGCGTTGGCATTGAACCTGTATTTCCGGAGAACACAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651448.1
3UTR GCA 90 bp CCTCCACATGCATTGGGGGAAGACATAGATGTTCCATTCATCAGCTaGGTCCCTCTCAGTGTCCAGTTAGGAACAGAAGCAATGGCTCCT +
Preference number: 1 (lower is better)
Translates to: PPHALGEDIDVPFIS*VPLSVQLGTEAMAP
Trigger: AGGAGCCATTGCTTCTGTTCCTAACTGGACACTGAGAGGGACGCAGCTGATGAATGGAACATCTATGTCTTCCCCCAATGCATGTGGAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651448.1
3UTR TCA 90 bp GGCTGGCAGGGGCAGTCTACAATGACAGCGCAAAGCAAAGCTTTCTaGTCCATGTGGATATCCACGGCCTGGTTGTTTTCAATGACACTT +
Preference number: 1 (lower is better)
Translates to: GWQGQSTMTAQSKAF*SMWISTAWLFSMTL
Trigger: AAGTGTCATTGAAAACAACCAGGCCGTGGATATCCACATGGATCAGAAAGCTTTGCTTTGCGCTGTCATTGTAGACTGCCCCTGCCAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493770.2
3UTR CCA 90 bp AAGAATTTGAGCACCAGGAGCTACCCCATTCCGTTCAGGTTCTTCTaGAAAGTGTCCAGCAGCTATACTAGCTACATGTGTCCCATGAGC +
Preference number: 1 (lower is better)
Translates to: KNLSTRSYPIPFRFF*KVSSSYTSYMCPMS
Trigger: GCTCATGGGACACATGTAGCTAGTATAGCTGCTGGACACTTTCCAGAAGAACCTGAACGGAATGGGGTAGCTCCTGGTGCTCAAATTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651448.1
3UTR TCA 90 bp GGCCTGTGCCTGTTTCCATTGTGCTTAGTCTTGTATCACCAATCTTaGTGGAAAGAATTTGAGCACCAGGAGCTACCCCATTCCGTTCAG +
Preference number: 1 (lower is better)
Translates to: GLCLFPLCLVLYHQS*WKEFEHQELPHSVQ
Trigger: CTGAACGGAATGGGGTAGCTCCTGGTGCTCAAATTCTTTCCATCAAGATTGGTGATACAAGACTAAGCACAATGGAAACAGGCACAGGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651448.1
3UTR GCA 90 bp TTGCACTCACTGGGCGCAGTGTTTGGACCCAGTTCTTCAAAGTTATaGAGGGAGCCAGATCTTCGTATTTCAAGGAGGACTGAACATCAA +
Preference number: 1 (lower is better)
Translates to: LHSLGAVFGPSSSKL*REPDLRISRRTEHQ
Trigger: TTGATGTTCAGTCCTCCTTGAAATACGAAGATCTGGCTCCCTGCATAACTTTGAAGAACTGGGTCCAAACACTGCGCCCAGTGAGTGCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651748.1
3UTR TCA 90 bp CCAAGGGCCCCGTCAGCACTAGGTCCTCTAGAAGACCAAGTATATTaGTTTGCAGGTAATTTCTCTCTCAGTGAATACTCAGCAACCATC +
Preference number: 1 (lower is better)
Translates to: PRAPSALGPLEDQVY*FAGNFSLSEYSATI
Trigger: GATGGTTGCTGAGTATTCACTGAGAGAGAAATTACCTGCAAATCAATATACTTGGTCTTCTAGAGGACCTAGTGCTGACGGGGCCCTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651448.1
3UTR GCA 90 bp TTTTGCTGCTATAACTGCAGTGATCGGAACTCTGAAGAGCGGACCTaGGTTAGGGGATGCTATATCATAGCCACATACCTCTGTATAATG +
Preference number: 1 (lower is better)
Translates to: FCCYNCSDRNSEERT*VRGCYIIATYLCIM
Trigger: CATTATACAGAGGTATGTGGCTATGATATAGCATCCCCTAACGCAGGTCCGCTCTTCAGAGTTCCGATCACTGCAGTTATAGCAGCAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651448.1
3UTR TCA 90 bp TCCATTGTGCTTAGTCTTGTATCACCAATCTTGATGGAAAGAATTTaGGCACCAGGAGCTACCCCATTCCGTTCAGGTTCTTCTGGAAAG +
Preference number: 1 (lower is better)
Translates to: SIVLSLVSPILMERI*APGATPFRSGSSGK
Trigger: CTTTCCAGAAGAACCTGAACGGAATGGGGTAGCTCCTGGTGCTCAAATTCTTTCCATCAAGATTGGTGATACAAGACTAAGCACAATGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651448.1
3UTR TCA 90 bp AGCCCCTGGGATCCACACGTATGTTTATGTGTCTACATTGATTCATaGGTTCCAAATGGCTGGGACACTGAACCCAAGATGAATTTGAAG +
Preference number: 1 (lower is better)
Translates to: SPWDPHVCLCVYIDS*VPNGWDTEPKMNLK
Trigger: CTTCAAATTCATCTTGGGTTCAGTGTCCCAGCCATTTGGAACTCATGAATCAATGTAGACACATAAACATACGTGTGGATCCCAGGGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651448.1
3UTR CCA 90 bp GAGTGTGTGAGAGAGAACATGCATGTAGCTTTCATGGATAGACTTTaGACCCTAGCTAGCCCAGAAGGTGTGACCAATATGCTTATACAT +
Preference number: 1 (lower is better)
Translates to: ECVRENMHVAFMDRL*TLASPEGVTNMLIH
Trigger: ATGTATAAGCATATTGGTCACACCTTCTGGGCTAGCTAGGGTCCAAAGTCTATCCATGAAAGCTACATGCATGTTCTCTCTCACACACTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376052.5
3UTR GCA 90 bp ACATTGAATGATACCGCAGTGTTTGGACCCAGTTCTTCAAAGTTATaGAGGGAGCCAGATCTTCGTATTTCAAGGAGGACTGAACATCAA +
Preference number: 1 (lower is better)
Translates to: TLNDTAVFGPSSSKL*REPDLRISRRTEHQ
Trigger: TTGATGTTCAGTCCTCCTTGAAATACGAAGATCTGGCTCCCTGCATAACTTTGAAGAACTGGGTCCAAACACTGCGGTATCATTCAATGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651448.1
3UTR TCA 90 bp ACCTCAAGAGGATGTGAAAATGACTTGCCTGTAATTACCCCAAGATaGAGATTTATTGAAGCAGTTATGCTCCAGCAACTGCCACTCATT +
Preference number: 1 (lower is better)
Translates to: TSRGCENDLPVITPR*RFIEAVMLQQLPLI
Trigger: AATGAGTGGCAGTTGCTGGAGCATAACTGCTTCAATAAATCTTCATCTTGGGGTAATTACAGGCAAGTCATTTTCACATCCTCTTGAGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376052.5
ENST00000651448.1
ENST00000651544.1
ENST00000651748.1
3UTR TCA 90 bp TGTCTGGCACTTACACATGTATTCATAGAGTTCATTCTGATGCTCTaGACCTCAAGAGGATGTGAAAATGACTTGCCTGTAATTACCCCA +
Preference number: 1 (lower is better)
Translates to: CLALTHVFIEFILML*TSRGCENDLPVITP
Trigger: TGGGGTAATTACAGGCAAGTCATTTTCACATCCTCTTGAGGTTCAGAGCATCAGAATGAACTCTATGAATACATGTGTAAGTGCCAGACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376052.5
ENST00000651448.1
ENST00000651544.1
ENST00000651748.1
3UTR GCA 90 bp AAGTCTTTTCATTCGTTCCTTTTCAGCATCCAATTGATGAAGTCGTaGAACGTACAGAGGAAGATAATTAGGATATGTTTCTTTCAATTC +
Preference number: 1 (lower is better)
Translates to: KSFHSFLFSIQLMKS*NVQRKIIRICFFQF
Trigger: GAATTGAAAGAAACATATCCTAATTATCTTCCTCTGTACGTTGCACGACTTCATCAATTGGATGCTGAAAAGGAACGAATGAAAAGACTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000651448.1
ENST00000651748.1
ENST00000651921.1
3UTR-3UTR CCA 90 bp GCTCACCAGATGGCAGGGGCCACACTCAGCCCTCCTCCTGGCCGAGGGAATGTTAGCAATGGCTCCTCCTaGCGCACTGATACTCACACC +
Preference number: 2 (lower is better)
Translates to: AHQMAGATLSPPPGRGNVSNGSS*RTDTHT
Trigger: GGTGTGAGTATCAGTGCGCCAGGAGGAGCCATTGCT...AACATTCCCTCGGCCAGGAGGAGGGCTGAGTGTGGCCCCTGCCATCTGGTGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651448.1
3UTR-3UTR TCA 90 bp GCTCACCAGATGGCAGGGGCCACACTCAGCCCTCCTCCTGGCCGAGGGAATGTTTTGATGGAAAGAATTTaGGCACCAGGAGCTACCCCA +
Preference number: 2 (lower is better)
Translates to: AHQMAGATLSPPPGRGNVLMERI*APGATP
Trigger: TGGGGTAGCTCCTGGTGCTCAAATTCTTTCCATCAA...AACATTCCCTCGGCCAGGAGGAGGGCTGAGTGTGGCCCCTGCCATCTGGTGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000651448.1
3UTR-3UTR CCA 90 bp GCTCACCAGATGGCAGGGGCCACACTCAGCCCTCCTCCTGGCCGAGGGAATGTTCCGTTCAGGTTCTTCTaGAAAGTGTCCAGCAGCTAT +
Preference number: 2 (lower is better)
Translates to: AHQMAGATLSPPPGRGNVPFRFF*KVSSSY
Trigger: ATAGCTGCTGGACACTTTCCAGAAGAACCTGAACGG...AACATTCCCTCGGCCAGGAGGAGGGCTGAGTGTGGCCCCTGCCATCTGGTGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651448.1
3UTR-3UTR TCA 90 bp GCTCACCAGATGGCAGGGGCCACACTCAGCCCTCCTCCTGGCCGAGGGAATGTTGTCTACATTGATTCATaGGTTCCAAATGGCTGGGAC +
Preference number: 2 (lower is better)
Translates to: AHQMAGATLSPPPGRGNVVYIDS*VPNGWD
Trigger: GTCCCAGCCATTTGGAACTCATGAATCAATGTAGAC...AACATTCCCTCGGCCAGGAGGAGGGCTGAGTGTGGCCCCTGCCATCTGGTGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651448.1
3UTR-3UTR GCA 90 bp GCAACCCAACTCGAAGTCCTAGGTGCTGGCAGGCAGGGCACATCCCCGTGCCAGACTGCCACTCATTTGTaGTGGTTCTACTTTTTCCCC +
Preference number: 2 (lower is better)
Translates to: ATQLEVLGAGRQGTSPCQTATHL*WFYFFP
Trigger: GGGGAAAAAGTAGAACCAGCACAAATGAGTGGCAGT...CTGGCACGGGGATGTGCCCTGCCTGCCAGCACCTAGGACTTCGAGTTGGGTTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376052.5
ENST00000651448.1
ENST00000651544.1
ENST00000651748.1
3UTR-3UTR CCA 90 bp GCAACCCAACTCGAAGTCCTAGGTGCTGGCAGGCAGGGCACATCCCCGTGCCAGTTCATGGATAGACTTTaGACCCTAGCTAGCCCAGAA +
Preference number: 2 (lower is better)
Translates to: ATQLEVLGAGRQGTSPCQFMDRL*TLASPE
Trigger: TTCTGGGCTAGCTAGGGTCCAAAGTCTATCCATGAA...CTGGCACGGGGATGTGCCCTGCCTGCCAGCACCTAGGACTTCGAGTTGGGTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376052.5
3UTR-3UTR TCA 90 bp CAACTCGAAGTCCTAGGTGCTGGCAGGCAGGGCACATCCCCGTGCCAGCAATGTATTAGCTTTCAGACCTaGAAGGATCAGGGCAATGCC +
Preference number: 2 (lower is better)
Translates to: QLEVLGAGRQGTSPCQQCISFQT*KDQGNA
Trigger: GGCATTGCCCTGATCCTTTCAGGTCTGAAAGCTAAT...ACATTGCTGGCACGGGGATGTGCCCTGCCTGCCAGCACCTAGGACTTCGAGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651448.1
3UTR-3UTR CCA 90 bp CAACTCGAAGTCCTAGGTGCTGGCAGGCAGGGCACATCCCCGTGCCAGCAATGTAATTCTCCCAGAATTTaGCCAGTGAGTTGCTTCTCC +
Preference number: 2 (lower is better)
Translates to: QLEVLGAGRQGTSPCQQCNSPRI*PVSCFS
Trigger: GGAGAAGCAACTCACTGGCCAAATTCTGGGAGAATT...ACATTGCTGGCACGGGGATGTGCCCTGCCTGCCAGCACCTAGGACTTCGAGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651448.1
3UTR-3UTR TCA 90 bp TGTTGCAAGACAGGTTCTGATTTGTACCCCTTGTGCAAACTGTTGACAGTACTGCTCCTCCTGGCGCACTaGTACTCACACCAAGGGCCC +
Preference number: 2 (lower is better)
Translates to: CCKTGSDLYPLCKLLTVLLLLAH*YSHQGP
Trigger: GGGCCCTTGGTGTGAGTATCAGTGCGCCAGGAGGAG...CAGTACTGTCAACAGTTTGCACAAGGGGTACAAATCAGAACCTGTCTTGCAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651448.1
3UTR-3UTR GCA 90 bp TCAGGTGGGACAGTGAAGCTAGAAGCTGATACTGGGGCTGCCTTGCAGAGATCTTCTGAAGAGCGGACCTaGGTTAGGGGATGCTATATC +
Preference number: 2 (lower is better)
Translates to: SGGTVKLEADTGAALQRSSEERT*VRGCYI
Trigger: GATATAGCATCCCCTAACGCAGGTCCGCTCTTCAGA...AGATCTCTGCAAGGCAGCCCCAGTATCAGCTTCTAGCTTCACTGTCCCACCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651448.1
3UTR-3UTR CCA 90 bp CTCCATTCTCTTACTGGACTAAACCTATACAAATGGGGACCTGTATGTGTGTGCCGAAGTCCTAGGTGCTaGCAGGCAGGGCACATCCCC +
Preference number: 2 (lower is better)
Translates to: LHSLTGLNLYKWGPVCVCRSPRC*QAGHIP
Trigger: GGGGATGTGCCCTGCCTGCCAGCACCTAGGACTTCG...GCACACACATACAGGTCCCCATTTGTATAGGTTTAGTCCAGTAAGAGAATGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376052.5
3UTR-3UTR TCA 90 bp CAAACTTTGCTGACACCTCAGAAGAACACGAACACACTGTCACTTCAGCCCATGGCTACATGTGTCCCATaGGCTCCTCCACTGGTCACA +
Preference number: 2 (lower is better)
Translates to: QTLLTPQKNTNTLSLQPMATCVP*APPLVT
Trigger: TGTGACCAGTGGAGGAGCTCATGGGACACATGTAGC...CATGGGCTGAAGTGACAGTGTGTTCGTGTTCTTCTGAGGTGTCAGCAAAGTTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651448.1
3UTR CAA 90 bp TTAGCTTTCAGACCTGAAAGGATCAGGGCAATGCCTCCACATGCATaGGGGGAAGACATAGATGTTCCATTCATCAGCTGCGTCCCTCTC +
Preference number: 2 (lower is better)
Translates to: LAFRPERIRAMPPHA*GEDIDVPFISCVPL
Trigger: GAGAGGGACGCAGCTGATGAATGGAACATCTATGTCTTCCCCCAATGCATGTGGAGGCATTGCCCTGATCCTTTCAGGTCTGAAAGCTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651448.1
3UTR CAA 90 bp GCACAACCTTTCCTACAAAGGGCATCTACGAGGGTGGATTTTTGTTaGTCCATGTCACTGTGTCTGAGCACTCCTTTCATCCGTCGCTCG +
Preference number: 2 (lower is better)
Translates to: AQPFLQRASTRVDFC*SMSLCLSTPFIRRS
Trigger: CGAGCGACGGATGAAAGGAGTGCTCAGACACAGTGACATGGACAAACAAAAATCCACCCTCGTAGATGCCCTTTGTAGGAAAGGTTGTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651921.1
3UTR CAA 90 bp CAGGGCACAACCTTTCCTACAAAGGGCATCTACGAGGGTGGATTTTaGTTTGTCCATGTCACTGTGTCTGAGCACTCCTTTCATCCGTCG +
Preference number: 2 (lower is better)
Translates to: QGTTFPTKGIYEGGF*FVHVTVSEHSFHPS
Trigger: CGACGGATGAAAGGAGTGCTCAGACACAGTGACATGGACAAACAAAAATCCACCCTCGTAGATGCCCTTTGTAGGAAAGGTTGTGCCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651921.1
3UTR-3UTR CCA 90 bp AGATTCAGCTGTCTGGCACTTACACATGTATTCATAGAGTTCATTCTGATGCTCCGAAGTCCTAGGTGCTaGCAGGCAGGGCACATCCCC +
Preference number: 2 (lower is better)
Translates to: RFSCLALTHVFIEFILMLRSPRC*QAGHIP
Trigger: GGGGATGTGCCCTGCCTGCCAGCACCTAGGACTTCG...GAGCATCAGAATGAACTCTATGAATACATGTGTAAGTGCCAGACAGCTGAATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376052.5
ENST00000651448.1
ENST00000651544.1
ENST00000651748.1
3UTR-3UTR TCA 90 bp CCAAAACCTATCATGCATGTCATAAGCTGCAACCCAACTCGAAGTCCTAGGTGCTATTTGGTGGAGGAATaGCGAGAGATGCACGTGCAG +
Preference number: 2 (lower is better)
Translates to: PKPIMHVISCNPTRSPRCYLVEE*REMHVQ
Trigger: CTGCACGTGCATCTCTCGTCATTCCTCCACCAAATA...GCACCTAGGACTTCGAGTTGGGTTGCAGCTTATGACATGCATGATAGGTTTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376052.5
3UTR-3UTR CCA 90 bp TTTTTGTTTGTCCATGTCACTGTGTCTGAGCACTCCTTTCATCCGTCGCTCGGCTGCCCAGAGAAGGGCTaGAATGATGCAGAAATCAGA +
Preference number: 2 (lower is better)
Translates to: FLFVHVTVSEHSFHPSLGCPEKG*NDAEIR
Trigger: TCTGATTTCTGCATCATTCCAGCCCTTCTCTGGGCA...GCCGAGCGACGGATGAAAGGAGTGCTCAGACACAGTGACATGGACAAACAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651921.1
3UTR-3UTR TCA 90 bp TTTGGCTCTTCTCCTAAGCCACTCTTATTGAGTGTCTTTAGCTGGGCTGGCAGGCAAAGCAAAGCTTTCTaGTCCATGTGGATATCCACG +
Preference number: 2 (lower is better)
Translates to: FGSSPKPLLLSVFSWAGRQSKAF*SMWIST
Trigger: CGTGGATATCCACATGGATCAGAAAGCTTTGCTTTG...CCTGCCAGCCCAGCTAAAGACACTCAATAAGAGTGGCTTAGGAGAAGAGCCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493770.2
3UTR-3UTR GCA 90 bp AGATTTATTGAAGCAGTTATGCTCCAGCAACTGCCACTCATTTGTGCTGGTTCTCAGGGCACATCCCCGTaGCAGCAATGTGAGGCATTA +
Preference number: 2 (lower is better)
Translates to: RFIEAVMLQQLPLICAGSQGTSP*QQCEAL
Trigger: TAATGCCTCACATTGCTGGCACGGGGATGTGCCCTG...AGAACCAGCACAAATGAGTGGCAGTTGCTGGAGCATAACTGCTTCAATAAATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376052.5
ENST00000651448.1
ENST00000651544.1
ENST00000651748.1
3UTR-3UTR GCA 90 bp AGTTATGCAGGGAGCCAGATCTTCGTATTTCAAGGAGGACTGAACATCAAAGCGGACATCACTGAGACTTaGCCACCAACGAGCAATGCA +
Preference number: 2 (lower is better)
Translates to: SYAGSQIFVFQGGLNIKADITET*PPTSNA
Trigger: TGCATTGCTCGTTGGTGGGCAAGTCTCAGTGATGTC...CGCTTTGATGTTCAGTCCTCCTTGAAATACGAAGATCTGGCTCCCTGCATAACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651448.1
ENST00000651748.1
3UTR-3UTR GCA 90 bp TCAGGTGGGACAGTGAAGCTAGAAGCTGATACTGGGGCTGCCTTGCAGAGATCTTGCCTGTTTCCATTGTaGTTAGTCTTGTATCACCAA +
Preference number: 2 (lower is better)
Translates to: SGGTVKLEADTGAALQRSCLFPL*LVLYHQ
Trigger: TTGGTGATACAAGACTAAGCACAATGGAAACAGGCA...AGATCTCTGCAAGGCAGCCCCAGTATCAGCTTCTAGCTTCACTGTCCCACCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651448.1
3UTR-3UTR CCA 90 bp TTAAGAAAACACCATGATGTCAGAGGTCTAGATTTACATGTATTAAGCCACACGCGAAGTCCTAGGTGCTaGCAGGCAGGGCACATCCCC +
Preference number: 2 (lower is better)
Translates to: LRKHHDVRGLDLHVLSHTRSPRC*QAGHIP
Trigger: GGGGATGTGCCCTGCCTGCCAGCACCTAGGACTTCG...CGTGTGGCTTAATACATGTAAATCTAGACCTCTGACATCATGGTGTTTTCTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376052.5
ENST00000651448.1
ENST00000651544.1
ENST00000651748.1
3UTR-3UTR CCA 90 bp AGATTTATTGAAGCAGTTATGCTCCAGCAACTGCCACTCATTTGTGCTGGTTCTCTGCATCAGTGGAAATaGCTCCGTCTTGAGCCTGGG +
Preference number: 2 (lower is better)
Translates to: RFIEAVMLQQLPLICAGSLHQWK*LRLEPG
Trigger: CCCAGGCTCAAGACGGAGCCATTTCCACTGATGCAG...AGAACCAGCACAAATGAGTGGCAGTTGCTGGAGCATAACTGCTTCAATAAATCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651448.1
ENST00000651748.1
3UTR CAA 90 bp GATATGCTCTTTGCTTCACAAGCTGGACTGCATGTAGAACAAACTTaGCTGACACCTCAGAAGAACACGAACACACTGTCACTTCAGCCC +
Preference number: 2 (lower is better)
Translates to: DMLFASQAGLHVEQT*LTPQKNTNTLSLQP
Trigger: GGGCTGAAGTGACAGTGTGTTCGTGTTCTTCTGAGGTGTCAGCAAAGTTTGTTCTACATGCAGTCCAGCTTGTGAAGCAAAGAGCATATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651448.1
ENST00000651748.1
3UTR-3UTR TCA 90 bp CAACCTTTCCTACAAAGGGCATCTACGAGGGTGGATTTTTGTTTGTCCATGTCACCCGTGCCAGCAATGTaGGGCATTAAGAAAACACCA +
Preference number: 2 (lower is better)
Translates to: QPFLQRASTRVDFCLSMSPVPAM*GIKKTP
Trigger: TGGTGTTTTCTTAATGCCTCACATTGCTGGCACGGG...TGACATGGACAAACAAAAATCCACCCTCGTAGATGCCCTTTGTAGGAAAGGTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000651448.1
ENST00000651748.1
3UTR-3UTR TCA 90 bp TGTTGCAAGACAGGTTCTGATTTGTACCCCTTGTGCAAACTGTTGACAGTACTGAACACAGTGAGTATGTaGACACAGGTCAAGGTGCCC +
Preference number: 2 (lower is better)
Translates to: CCKTGSDLYPLCKLLTVLNTVSM*TQVKVP
Trigger: GGGCACCTTGACCTGTGTTCACATACTCACTGTGTT...CAGTACTGTCAACAGTTTGCACAAGGGGTACAAATCAGAACCTGTCTTGCAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651448.1
3UTR-3UTR TCA 90 bp AGATTTATTGAAGCAGTTATGCTCCAGCAACTGCCACTCATTTGTGCTGGTTCTCCCGTGCCAGCAATGTaGGGCATTAAGAAAACACCA +
Preference number: 2 (lower is better)
Translates to: RFIEAVMLQQLPLICAGSPVPAM*GIKKTP
Trigger: TGGTGTTTTCTTAATGCCTCACATTGCTGGCACGGG...AGAACCAGCACAAATGAGTGGCAGTTGCTGGAGCATAACTGCTTCAATAAATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376052.5
ENST00000651448.1
ENST00000651544.1
ENST00000651748.1
3UTR-3UTR TCA 90 bp CCAAAACCTATCATGCATGTCATAAGCTGCAACCCAACTCGAAGTCCTAGGTGCCGCTCTAACACTTCATaGGATACAGCAGAAACAGTT +
Preference number: 2 (lower is better)
Translates to: PKPIMHVISCNPTRSPRCRSNTS*DTAETV
Trigger: AACTGTTTCTGCTGTATCTCATGAAGTGTTAGAGCG...GCACCTAGGACTTCGAGTTGGGTTGCAGCTTATGACATGCATGATAGGTTTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376052.5
3UTR-3UTR TCA 90 bp GCTCCAGCAACTGCCACTCATTTGTGCTGGTTCTACTTTTTCCCCTTAATTGAAGGCGTTCCAAATCACTaGTTTGCTCATGGCGAATCT +
Preference number: 2 (lower is better)
Translates to: APATATHLCWFYFFPLIEGVPNH*FAHGES
Trigger: AGATTCGCCATGAGCAAATCAGTGATTTGGAACGCC...TTCAATTAAGGGGAAAAAGTAGAACCAGCACAAATGAGTGGCAGTTGCTGGAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000651448.1
ENST00000651748.1
3UTR-3UTR TCA 90 bp GGCTGTTTGATCTATATGAGAAATAACAGCATTTGCCGCATCAACAATTTCATTTCGGCAAATGCTGCCTaGTGGATCCTGGCTGCCCAG +
Preference number: 2 (lower is better)
Translates to: GCLIYMRNNSICRINNFISANAA*WILAAQ
Trigger: CTGGGCAGCCAGGATCCATCAGGCAGCATTTGCCGA...AATGAAATTGTTGATGCGGCAAATGCTGTTATTTCTCATATAGATCAAACAGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651921.1
3UTR-3UTR GCA 90 bp CGAACACACTGTCACTTCAGCCCATGTTGCACCCTCAGGAACCTCAATAAAATGAGTTCTTCAAAGTTATaGAGGGAGCCAGATCTTCGT +
Preference number: 2 (lower is better)
Translates to: RTHCHFSPCCTLRNLNKMSSSKL*REPDLR
Trigger: ACGAAGATCTGGCTCCCTGCATAACTTTGAAGAACT...CATTTTATTGAGGTTCCTGAGGGTGCAACATGGGCTGAAGTGACAGTGTGTTCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000651448.1
ENST00000651748.1
3UTR-3UTR GCA 90 bp CGAACACACTGTCACTTCAGCCCATGTTGCACCCTCAGGAACCTCAATAAAATGATAGCATCCAGGTCCTaGCCCTTTAGGTATTTTATC +
Preference number: 2 (lower is better)
Translates to: RTHCHFSPCCTLRNLNKMIASRS*PFRYFI
Trigger: GATAAAATACCTAAAGGGGCAGGACCTGGATGCTAT...CATTTTATTGAGGTTCCTGAGGGTGCAACATGGGCTGAAGTGACAGTGTGTTCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000651448.1
ENST00000651748.1
3UTR-3UTR CCA 90 bp CCAAAACCTATCATGCATGTCATAAGCTGCAACCCAACTCGAAGTCCTAGGTGCTGTCTGTTTATTTGGTaGAGGAATGACGAGAGATGC +
Preference number: 2 (lower is better)
Translates to: PKPIMHVISCNPTRSPRCCLFIW*RNDERC
Trigger: GCATCTCTCGTCATTCCTCCACCAAATAAACAGACA...GCACCTAGGACTTCGAGTTGGGTTGCAGCTTATGACATGCATGATAGGTTTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376052.5
3UTR-3UTR CCA 90 bp AGACTTGCCCACCAACGAGCAATGCAAAATTCAATTGCTTTTCCACCTAGGACATTCCTTCTGCATCAGTaGAAATGGCTCCGTCTTGAG +
Preference number: 2 (lower is better)
Translates to: RLAHQRAMQNSIAFPPRTFLLHQ*KWLRLE
Trigger: CTCAAGACGGAGCCATTTCCACTGATGCAGAAGGAA...TGTCCTAGGTGGAAAAGCAATTGAATTTTGCATTGCTCGTTGGTGGGCAAGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000651448.1
ENST00000651748.1
3UTR-3UTR TCA 90 bp AGATTCAGCTGTCTGGCACTTACACATGTATTCATAGAGTTCATTCTGATGCTCCCCGTGCCAGCAATGTaGGGCATTAAGAAAACACCA +
Preference number: 2 (lower is better)
Translates to: RFSCLALTHVFIEFILMLPVPAM*GIKKTP
Trigger: TGGTGTTTTCTTAATGCCTCACATTGCTGGCACGGG...GAGCATCAGAATGAACTCTATGAATACATGTGTAAGTGCCAGACAGCTGAATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376052.5
ENST00000651448.1
ENST00000651544.1
ENST00000651748.1
3UTR-3UTR TCA 90 bp GCTCCAGCAACTGCCACTCATTTGTGCTGGTTCTACTTTTTCCCCTTAATTGAACTAGCCCAGAAGGTGTaGCCAATATGCTTATACATG +
Preference number: 2 (lower is better)
Translates to: APATATHLCWFYFFPLIELAQKV*PICLYM
Trigger: CATGTATAAGCATATTGGTCACACCTTCTGGGCTAG...TTCAATTAAGGGGAAAAAGTAGAACCAGCACAAATGAGTGGCAGTTGCTGGAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376052.5
3UTR-3UTR TCA 90 bp AGACTTGCCCACCAACGAGCAATGCAAAATTCAATTGCTTTTCCACCTAGGACAGAACATCAAAGCGGTTaGTTCCTTCCGATGCATGAA +
Preference number: 2 (lower is better)
Translates to: RLAHQRAMQNSIAFPPRTEHQSG*FLPMHE
Trigger: TTCATGCATCGGAAGGAATCAACCGCTTTGATGTTC...TGTCCTAGGTGGAAAAGCAATTGAATTTTGCATTGCTCGTTGGTGGGCAAGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000651448.1
ENST00000651748.1
3UTR-3UTR TCA 90 bp GTATTTCAAGGAGGACTGAACATCAAAGCGGTTGATTCCTTCCGATGCATGAATTGGATAGGCATCGCCTaGACCCATCTGTCTTTTGTT +
Preference number: 2 (lower is better)
Translates to: VFQGGLNIKAVDSFRCMNWIGIA*THLSFV
Trigger: AACAAAAGACAGATGGGTTCAGGCGATGCCTATCCA...ATTCATGCATCGGAAGGAATCAACCGCTTTGATGTTCAGTCCTCCTTGAAATAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000651448.1
ENST00000651748.1
3UTR-3UTR GCA 90 bp CATATCATATGTGTATCTTTACAATACCTGATAAAGATTCAGCTGTCTGGCACTACTCGAAGTCCTAGGTaGTGGCAGGCAGGGCACATC +
Preference number: 2 (lower is better)
Translates to: HIICVSLQYLIKIQLSGTTRSPR*WQAGHI
Trigger: GATGTGCCCTGCCTGCCAGCACCTAGGACTTCGAGT...AGTGCCAGACAGCTGAATCTTTATCAGGTATTGTAAAGATACACATATGATATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376052.5
ENST00000651448.1
ENST00000651544.1
ENST00000651748.1
3UTR-3UTR GCA 90 bp GCTCCAGCAACTGCCACTCATTTGTGCTGGTTCTACTTTTTCCCCTTAATTGAAATGCATGTCATAAGCTaGAACCCAACTCGAAGTCCT +
Preference number: 2 (lower is better)
Translates to: APATATHLCWFYFFPLIEMHVIS*NPTRSP
Trigger: AGGACTTCGAGTTGGGTTGCAGCTTATGACATGCAT...TTCAATTAAGGGGAAAAAGTAGAACCAGCACAAATGAGTGGCAGTTGCTGGAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376052.5
ENST00000651448.1
ENST00000651544.1
ENST00000651748.1
3UTR-3UTR GCA 90 bp AGTTATGCAGGGAGCCAGATCTTCGTATTTCAAGGAGGACTGAACATCAAAGCGTTCATGGCTTCGATATaGTCTTTGCTTCACAAGCTG +
Preference number: 2 (lower is better)
Translates to: SYAGSQIFVFQGGLNIKAFMASI*SLLHKL
Trigger: CAGCTTGTGAAGCAAAGAGCATATCGAAGCCATGAA...CGCTTTGATGTTCAGTCCTCCTTGAAATACGAAGATCTGGCTCCCTGCATAACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651448.1
ENST00000651748.1
3UTR-3UTR GCA 90 bp CAAACTTTGCTGACACCTCAGAAGAACACGAACACACTGTCACTTCAGCCCATGCAATTGATGAAGTCGTaGAACGTACAGAGGAAGATA +
Preference number: 2 (lower is better)
Translates to: QTLLTPQKNTNTLSLQPMQLMKS*NVQRKI
Trigger: TATCTTCCTCTGTACGTTGCACGACTTCATCAATTG...CATGGGCTGAAGTGACAGTGTGTTCGTGTTCTTCTGAGGTGTCAGCAAAGTTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651448.1
ENST00000651748.1
3UTR CAA 90 bp AGTAATGAACAGGGATTACATCAGCTTTCTTTCCTAGTTCAGTCTTaGACAATGTTAAGGATCCTGCAAGATAGCATCCAGGTCCTGCCC +
Preference number: 2 (lower is better)
Translates to: SNEQGLHQLSFLVQS*TMLRILQDSIQVLP
Trigger: GGGCAGGACCTGGATGCTATCTTGCAGGATCCTTAACATTGTCAAAGACTGAACTAGGAAAGAAAGCTGATGTAATCCCTGTTCATTACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651448.1
ENST00000651748.1
3UTR-3UTR TCA 90 bp CAGGTGAAAGTCCATGAGTGTGTGAGAGAGAACATGCATGTAGCTTTCATGGATAGAAACAGTTGGGAGTaGCTAAGGATTACTGGTAGT +
Preference number: 2 (lower is better)
Translates to: QVKVHECVRENMHVAFMDRNSWE*LRITGS
Trigger: ACTACCAGTAATCCTTAGTCACTCCCAACTGTTTCT...ATCCATGAAAGCTACATGCATGTTCTCTCTCACACACTCATGGACTTTCACCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376052.5
3UTR-3UTR TCA 90 bp AGATTTATTGAAGCAGTTATGCTCCAGCAACTGCCACTCATTTGTGCTGGTTCTGAACATCAAAGCGGTTaGTTCCTTCCGATGCATGAA +
Preference number: 2 (lower is better)
Translates to: RFIEAVMLQQLPLICAGSEHQSG*FLPMHE
Trigger: TTCATGCATCGGAAGGAATCAACCGCTTTGATGTTC...AGAACCAGCACAAATGAGTGGCAGTTGCTGGAGCATAACTGCTTCAATAAATCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651448.1
ENST00000651748.1
3UTR-3UTR GCA 90 bp GGTATTAGACAATCTATGAGAAACAATAAATGGAAGGTCTTTAAGGCGTTCCAACAGGGCACATCCCCGTaGCAGCAATGTGAGGCATTA +
Preference number: 2 (lower is better)
Translates to: GIRQSMRNNKWKVFKAFQQGTSP*QQCEAL
Trigger: TAATGCCTCACATTGCTGGCACGGGGATGTGCCCTG...TTGGAACGCCTTAAAGACCTTCCATTTATTGTTTCTCATAGATTGTCTAATACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000651448.1
ENST00000651748.1
3UTR-3UTR GCA 90 bp TGCAAATGTCAAAACCTTATTGTCAAAGAGATCAGTCCATTTAGTAGTTTCCCACAGGGCACATCCCCGTaGCAGCAATGTGAGGCATTA +
Preference number: 2 (lower is better)
Translates to: CKCQNLIVKEISPFSSFPQGTSP*QQCEAL
Trigger: TAATGCCTCACATTGCTGGCACGGGGATGTGCCCTG...TGGGAAACTACTAAATGGACTGATCTCTTTGACAATAAGGTTTTGACATTTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000651448.1
ENST00000651748.1
3UTR-3UTR GCA 90 bp GCTCCAGCAACTGCCACTCATTTGTGCTGGTTCTACTTTTTCCCCTTAATTGAATTATTGAAGCAGTTATaGTCCAGCAACTGCCACTCA +
Preference number: 2 (lower is better)
Translates to: APATATHLCWFYFFPLIELLKQL*SSNCHS
Trigger: TGAGTGGCAGTTGCTGGAGCATAACTGCTTCAATAA...TTCAATTAAGGGGAAAAAGTAGAACCAGCACAAATGAGTGGCAGTTGCTGGAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376052.5
ENST00000651448.1
ENST00000651544.1
ENST00000651748.1
3UTR-3UTR GCA 90 bp AGATTCAGCTGTCTGGCACTTACACATGTATTCATAGAGTTCATTCTGATGCTCAGGAATGACGAGAGATaGACGTGCAGTAGCCAAAGA +
Preference number: 2 (lower is better)
Translates to: RFSCLALTHVFIEFILMLRNDER*TCSSQR
Trigger: TCTTTGGCTACTGCACGTGCATCTCTCGTCATTCCT...GAGCATCAGAATGAACTCTATGAATACATGTGTAAGTGCCAGACAGCTGAATCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376052.5
3UTR-3UTR GCA 90 bp GCTCCAGCAACTGCCACTCATTTGTGCTGGTTCTACTTTTTCCCCTTAATTGAAATTTGGCCAGTGAGTTaGTTCTCCGTAACTGTAGTT +
Preference number: 2 (lower is better)
Translates to: APATATHLCWFYFFPLIEIWPVS*FSVTVV
Trigger: AACTACAGTTACGGAGAAGCAACTCACTGGCCAAAT...TTCAATTAAGGGGAAAAAGTAGAACCAGCACAAATGAGTGGCAGTTGCTGGAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651448.1
3UTR-3UTR GCA 90 bp GGCTGTTTGATCTATATGAGAAATAACAGCATTTGCCGCATCAACAATTTCATTAGACTCGGCAAATGCTaGCTGATGGATCCTGGCTGC +
Preference number: 2 (lower is better)
Translates to: GCLIYMRNNSICRINNFIRLGKC*LMDPGC
Trigger: GCAGCCAGGATCCATCAGGCAGCATTTGCCGAGTCT...AATGAAATTGTTGATGCGGCAAATGCTGTTATTTCTCATATAGATCAAACAGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651921.1
3UTR-3UTR CCA 90 bp CAAACTTTGCTGACACCTCAGAAGAACACGAACACACTGTCACTTCAGCCCATGATGGCTGGTTATATTTaGGTGGTAATGTCAAATTGC +
Preference number: 2 (lower is better)
Translates to: QTLLTPQKNTNTLSLQPMMAGYI*VVMSNC
Trigger: GCAATTTGACATTACCACCCAAATATAACCAGCCAT...CATGGGCTGAAGTGACAGTGTGTTCGTGTTCTTCTGAGGTGTCAGCAAAGTTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651448.1
ENST00000651748.1
3UTR-3UTR CCA 90 bp TTAAGAAAACACCATGATGTCAGAGGTCTAGATTTACATGTATTAAGCCACACGCATGAGCTCCTCCACTaGTCACAATGGAGAGCAGGT +
Preference number: 2 (lower is better)
Translates to: LRKHHDVRGLDLHVLSHTHELLH*SQWRAG
Trigger: ACCTGCTCTCCATTGTGACCAGTGGAGGAGCTCATG...CGTGTGGCTTAATACATGTAAATCTAGACCTCTGACATCATGGTGTTTTCTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651448.1
3UTR-3UTR TCA 90 bp TGTTTATTTGGTGGAGGAATGACGAGAGATGCACGTGCAGTAGCCAAAGATAAATTCATTCTGATGCTCTaGACCTCAAGAGGATGTGAA +
Preference number: 2 (lower is better)
Translates to: CLFGGGMTRDARAVAKDKFILML*TSRGCE
Trigger: TTCACATCCTCTTGAGGTTCAGAGCATCAGAATGAA...TTTATCTTTGGCTACTGCACGTGCATCTCTCGTCATTCCTCCACCAAATAAACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376052.5
3UTR-3UTR TCA 90 bp AGATTTATTGAAGCAGTTATGCTCCAGCAACTGCCACTCATTTGTGCTGGTTCTTTCATTCTGATGCTCTaGACCTCAAGAGGATGTGAA +
Preference number: 2 (lower is better)
Translates to: RFIEAVMLQQLPLICAGSFILML*TSRGCE
Trigger: TTCACATCCTCTTGAGGTTCAGAGCATCAGAATGAA...AGAACCAGCACAAATGAGTGGCAGTTGCTGGAGCATAACTGCTTCAATAAATCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376052.5
ENST00000651448.1
ENST00000651544.1
ENST00000651748.1
3UTR-3UTR TCA 90 bp AGTTATGCAGGGAGCCAGATCTTCGTATTTCAAGGAGGACTGAACATCAAAGCGAAATGCCTTCGAATTTaGCCAGGTTTAAAGTGTACA +
Preference number: 2 (lower is better)
Translates to: SYAGSQIFVFQGGLNIKAKCLRI*PGLKCT
Trigger: TGTACACTTTAAACCTGGTCAAATTCGAAGGCATTT...CGCTTTGATGTTCAGTCCTCCTTGAAATACGAAGATCTGGCTCCCTGCATAACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651448.1
ENST00000651748.1
3UTR-3UTR TCA 90 bp AGATTCAGCTGTCTGGCACTTACACATGTATTCATAGAGTTCATTCTGATGCTCTTGCAAGACAGGTTCTaGTTTGTACCCCTTGTGCAA +
Preference number: 2 (lower is better)
Translates to: RFSCLALTHVFIEFILMLLQDRF*FVPLVQ
Trigger: TTGCACAAGGGGTACAAATCAGAACCTGTCTTGCAA...GAGCATCAGAATGAACTCTATGAATACATGTGTAAGTGCCAGACAGCTGAATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651448.1
3UTR-3UTR GCA 90 bp AATGGAAGGTCTTTAAGGCGTTCCAAATCACTGATTTGCTCATGGCGAATCTGTTTATTGAAGCAGTTATaGTCCAGCAACTGCCACTCA +
Preference number: 2 (lower is better)
Translates to: NGRSLRRSKSLICSWRICLLKQL*SSNCHS
Trigger: TGAGTGGCAGTTGCTGGAGCATAACTGCTTCAATAA...ACAGATTCGCCATGAGCAAATCAGTGATTTGGAACGCCTTAAAGACCTTCCATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651448.1
ENST00000651748.1
3UTR-3UTR GCA 90 bp GCTCCAGCAACTGCCACTCATTTGTGCTGGTTCTACTTTTTCCCCTTAATTGAACAATTGATGAAGTCGTaGAACGTACAGAGGAAGATA +
Preference number: 2 (lower is better)
Translates to: APATATHLCWFYFFPLIEQLMKS*NVQRKI
Trigger: TATCTTCCTCTGTACGTTGCACGACTTCATCAATTG...TTCAATTAAGGGGAAAAAGTAGAACCAGCACAAATGAGTGGCAGTTGCTGGAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000651448.1
ENST00000651748.1
3UTR-3UTR GCA 90 bp TTGGTGGAGGTATTAAGTAGTAATGAACAGGGATTACATCAGCTTTCTTTCCTAGGCAATGCCTCCACATaGATTGGGGGAAGACATAGA +
Preference number: 2 (lower is better)
Translates to: LVEVLSSNEQGLHQLSFLGNAST*IGGRHR
Trigger: TCTATGTCTTCCCCCAATGCATGTGGAGGCATTGCC...TAGGAAAGAAAGCTGATGTAATCCCTGTTCATTACTACTTAATACCTCCACCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651448.1
3UTR-3UTR CCA 90 bp ACACATCAAGCTTTGCTGACTTTTGGCTCTTCTCCTAAGCCACTCTTATTGAGTTGGATATCCACGGCCTaGTTGTTTTCAATGACACTT +
Preference number: 2 (lower is better)
Translates to: THQALLTFGSSPKPLLLSWISTA*LFSMTL
Trigger: AAGTGTCATTGAAAACAACCAGGCCGTGGATATCCA...ACTCAATAAGAGTGGCTTAGGAGAAGAGCCAAAAGTCAGCAAAGCTTGATGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493770.2
3UTR-3UTR CCA 90 bp TCTTTAAGGCGTTCCAAATCACTGATTTGCTCATGGCGAATCTGTAGTCGAATTGGGCATCTACGAGGGTaGATTTTTGTTTGTCCATGT +
Preference number: 2 (lower is better)
Translates to: SLRRSKSLICSWRICSRIGHLRG*IFVCPC
Trigger: ACATGGACAAACAAAAATCCACCCTCGTAGATGCCC...AATTCGACTACAGATTCGCCATGAGCAAATCAGTGATTTGGAACGCCTTAAAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000651448.1
ENST00000651748.1
3UTR-3UTR CCA 90 bp GCTCCAGCAACTGCCACTCATTTGTGCTGGTTCTACTTTTTCCCCTTAATTGAAGTAAAAGATGCACAATaGGTCCATCCAAGTAACTTC +
Preference number: 2 (lower is better)
Translates to: APATATHLCWFYFFPLIEVKDAQ*VHPSNF
Trigger: GAAGTTACTTGGATGGACCCATTGTGCATCTTTTAC...TTCAATTAAGGGGAAAAAGTAGAACCAGCACAAATGAGTGGCAGTTGCTGGAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000651448.1
ENST00000651748.1
3UTR CAA 90 bp AACGGAGTAATTCAACATCTCAGCTGTGCCAAAAGAGCCATATTCTaGGGCTTCTTTGTAGTTTCTCAACACGGTAGATTTACTCAAGTC +
Preference number: 2 (lower is better)
Translates to: NGVIQHLSCAKRAIF*GFFVVSQHGRFTQV
Trigger: GACTTGAGTAAATCTACCGTGTTGAGAAACTACAAAGAAGCCCAAGAATATGGCTCTTTTGGCACAGCTGAGATGTTGAATTACTCCGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651448.1
3UTR-3UTR GCA 90 bp TCAAAGAATACTGATGTGGATAGGCATCGCCTGAACCCATCTGTCTTTTGTTCTATTAAGGTACCAGAGTaGATATGGTGTACTGTGATC +
Preference number: 2 (lower is better)
Translates to: SKNTDVDRHRLNPSVFCSIKVPE*IWCTVI
Trigger: GATCACAGTACACCATATGCACTCTGGTACCTTAAT...AGAACAAAAGACAGATGGGTTCAGGCGATGCCTATCCACATCAGTATTCTTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651748.1
3UTR-3UTR GCA 90 bp AGATTCAGCTGTCTGGCACTTACACATGTATTCATAGAGTTCATTCTGATGCTCTTCATGGCTTCGATATaGTCTTTGCTTCACAAGCTG +
Preference number: 2 (lower is better)
Translates to: RFSCLALTHVFIEFILMLFMASI*SLLHKL
Trigger: CAGCTTGTGAAGCAAAGAGCATATCGAAGCCATGAA...GAGCATCAGAATGAACTCTATGAATACATGTGTAAGTGCCAGACAGCTGAATCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651448.1
ENST00000651748.1
3UTR-3UTR GCA 90 bp GGCTGTTTGATCTATATGAGAAATAACAGCATTTGCCGCATCAACAATTTCATTGACATCACTGAGACTTaGCCACCAACGAGCAATGCA +
Preference number: 2 (lower is better)
Translates to: GCLIYMRNNSICRINNFIDITET*PPTSNA
Trigger: TGCATTGCTCGTTGGTGGGCAAGTCTCAGTGATGTC...AATGAAATTGTTGATGCGGCAAATGCTGTTATTTCTCATATAGATCAAACAGCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651448.1
ENST00000651748.1
3UTR-3UTR GCA 90 bp GTATTTCAAGGAGGACTGAACATCAAAGCGGTTGATTCCTTCCGATGCATGAATTCAACATCTCAGCTGTaGCAAAAGAGCCATATTCTT +
Preference number: 2 (lower is better)
Translates to: VFQGGLNIKAVDSFRCMNSTSQL*QKSHIL
Trigger: AAGAATATGGCTCTTTTGGCACAGCTGAGATGTTGA...ATTCATGCATCGGAAGGAATCAACCGCTTTGATGTTCAGTCCTCCTTGAAATAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651448.1
3UTR-3UTR CCA 90 bp AGATTCAGCTGTCTGGCACTTACACATGTATTCATAGAGTTCATTCTGATGCTCCTAAACCTATACAAATaGGGACCTGTATGTGTGTGC +
Preference number: 2 (lower is better)
Translates to: RFSCLALTHVFIEFILMLLNLYK*GPVCVC
Trigger: GCACACACATACAGGTCCCCATTTGTATAGGTTTAG...GAGCATCAGAATGAACTCTATGAATACATGTGTAAGTGCCAGACAGCTGAATCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376052.5
3UTR-3UTR CCA 90 bp GTATTTCAAGGAGGACTGAACATCAAAGCGGTTGATTCCTTCCGATGCATGAATGGAAGTAACAAAGAATaGCTGGTTATATTTGGGTGG +
Preference number: 2 (lower is better)
Translates to: VFQGGLNIKAVDSFRCMNGSNKE*LVIFGW
Trigger: CCACCCAAATATAACCAGCCATTCTTTGTTACTTCC...ATTCATGCATCGGAAGGAATCAACCGCTTTGATGTTCAGTCCTCCTTGAAATAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651448.1
ENST00000651748.1
3UTR-3UTR CCA 90 bp CATATCATATGTGTATCTTTACAATACCTGATAAAGATTCAGCTGTCTGGCACTACTTTGCTGGTCAGGTaGGACAGTGAAGCTAGAAGC +
Preference number: 2 (lower is better)
Translates to: HIICVSLQYLIKIQLSGTTLLVR*DSEARS
Trigger: GCTTCTAGCTTCACTGTCCCACCTGACCAGCAAAGT...AGTGCCAGACAGCTGAATCTTTATCAGGTATTGTAAAGATACACATATGATATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651448.1
3UTR-3UTR TCA 90 bp TGTTTATTTGGTGGAGGAATGACGAGAGATGCACGTGCAGTAGCCAAAGATAAAAAGATGAAGATTTATTaGAGCAGTTATGCTCCAGCA +
Preference number: 2 (lower is better)
Translates to: CLFGGGMTRDARAVAKDKKMKIY*SSYAPA
Trigger: TGCTGGAGCATAACTGCTTCAATAAATCTTCATCTT...TTTATCTTTGGCTACTGCACGTGCATCTCTCGTCATTCCTCCACCAAATAAACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376052.5
3UTR-3UTR TCA 90 bp AGATTTATTGAAGCAGTTATGCTCCAGCAACTGCCACTCATTTGTGCTGGTTCTGCATATGGTGTACTGTaGTCTTGGTTTTGCAAATTT +
Preference number: 2 (lower is better)
Translates to: RFIEAVMLQQLPLICAGSAYGVL*SWFCKF
Trigger: AAATTTGCAAAACCAAGATCACAGTACACCATATGC...AGAACCAGCACAAATGAGTGGCAGTTGCTGGAGCATAACTGCTTCAATAAATCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376052.5
ENST00000651544.1
ENST00000651748.1
3UTR-3UTR TCA 90 bp TCAAAGAATACTGATGTGGATAGGCATCGCCTGAACCCATCTGTCTTTTGTTCTAAATGCCTTCGAATTTaGCCAGGTTTAAAGTGTACA +
Preference number: 2 (lower is better)
Translates to: SKNTDVDRHRLNPSVFCSKCLRI*PGLKCT
Trigger: TGTACACTTTAAACCTGGTCAAATTCGAAGGCATTT...AGAACAAAAGACAGATGGGTTCAGGCGATGCCTATCCACATCAGTATTCTTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000651448.1
ENST00000651748.1
3UTR-3UTR TCA 90 bp AGATTCAGCTGTCTGGCACTTACACATGTATTCATAGAGTTCATTCTGATGCTCTATTTCAAGGAGGACTaGACATCAAAGCGGTTGATT +
Preference number: 2 (lower is better)
Translates to: RFSCLALTHVFIEFILMLYFKED*TSKRLI
Trigger: AATCAACCGCTTTGATGTTCAGTCCTCCTTGAAATA...GAGCATCAGAATGAACTCTATGAATACATGTGTAAGTGCCAGACAGCTGAATCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651448.1
ENST00000651748.1
3UTR-3UTR TCA 90 bp TATATTTGGGTGGTAATGTCAAATTGCTTGATTTCTTCTTCCCTAGAAGTGCAATGGATAGGCATCGCCTaGACCCATCTGTCTTTTGTT +
Preference number: 2 (lower is better)
Translates to: YIWVVMSNCLISSSLEVQWIGIA*THLSFV
Trigger: AACAAAAGACAGATGGGTTCAGGCGATGCCTATCCA...TTGCACTTCTAGGGAAGAAGAAATCAAGCAATTTGACATTACCACCCAAATATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000651448.1
ENST00000651748.1
3UTR-3UTR GCA 90 bp ATTGTCAAAGAGATCAGTCCATTTAGTAGTTTCCCAAAATGTTTCTGCCAGAGACTTCGATATGCTCTTTaGTTCACAAGCTGGACTGCA +
Preference number: 2 (lower is better)
Translates to: IVKEISPFSSFPKCFCQRLRYAL*FTSWTA
Trigger: TGCAGTCCAGCTTGTGAAGCAAAGAGCATATCGAAG...TCTCTGGCAGAAACATTTTGGGAAACTACTAAATGGACTGATCTCTTTGACAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000651448.1
ENST00000651748.1
3UTR-3UTR GCA 90 bp TTTTCATTCGTTCCTTTTCAGCATCCAATTGATGAAGTCGTGCAACGTACAGAGCCCACCAACGAGCAATaGAAAATTCAATTGCTTTTC +
Preference number: 2 (lower is better)
Translates to: FSFVPFQHPIDEVVQRTEPTNEQ*KIQLLF
Trigger: GAAAAGCAATTGAATTTTGCATTGCTCGTTGGTGGG...CTCTGTACGTTGCACGACTTCATCAATTGGATGCTGAAAAGGAACGAATGAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000651448.1
ENST00000651748.1
3UTR-3UTR GCA 90 bp TCTTTAAGGCGTTCCAAATCACTGATTTGCTCATGGCGAATCTGTAGTCGAATTTCCAAATCACTGATTTaGTCATGGCGAATCTGTAGT +
Preference number: 2 (lower is better)
Translates to: SLRRSKSLICSWRICSRISKSLI*SWRICS
Trigger: ACTACAGATTCGCCATGAGCAAATCAGTGATTTGGA...AATTCGACTACAGATTCGCCATGAGCAAATCAGTGATTTGGAACGCCTTAAAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651448.1
ENST00000651748.1
3UTR-3UTR CCA 90 bp TTAAGAAAACACCATGATGTCAGAGGTCTAGATTTACATGTATTAAGCCACACGCTTCTCTTAAGCCCCTaGGATCCACACGTATGTTTA +
Preference number: 2 (lower is better)
Translates to: LRKHHDVRGLDLHVLSHTLLLSP*DPHVCL
Trigger: TAAACATACGTGTGGATCCCAGGGGCTTAAGAGAAG...CGTGTGGCTTAATACATGTAAATCTAGACCTCTGACATCATGGTGTTTTCTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651448.1
3UTR-3UTR GCA 90 bp TATATTTGGGTGGTAATGTCAAATTGCTTGATTTCTTCTTCCCTAGAAGTGCAAACTGCCACTCATTTGTaGTGGTTCTACTTTTTCCCC +
Preference number: 2 (lower is better)
Translates to: YIWVVMSNCLISSSLEVQTATHL*WFYFFP
Trigger: GGGGAAAAAGTAGAACCAGCACAAATGAGTGGCAGT...TTGCACTTCTAGGGAAGAAGAAATCAAGCAATTTGACATTACCACCCAAATATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000651448.1
ENST00000651748.1
3UTR-3UTR GCA 90 bp GGTATTAGACAATCTATGAGAAACAATAAATGGAAGGTCTTTAAGGCGTTCCAACTTCGATATGCTCTTTaGTTCACAAGCTGGACTGCA +
Preference number: 2 (lower is better)
Translates to: GIRQSMRNNKWKVFKAFQLRYAL*FTSWTA
Trigger: TGCAGTCCAGCTTGTGAAGCAAAGAGCATATCGAAG...TTGGAACGCCTTAAAGACCTTCCATTTATTGTTTCTCATAGATTGTCTAATACC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651448.1
ENST00000651748.1
3UTR-3UTR GCA 90 bp AATGAACAGGGATTACATCAGCTTTCTTTCCTAGTTCAGTCTTTGACAATGTTACAGACTTCGCCATCATaGCATACCAAGCAGTCATAT +
Preference number: 2 (lower is better)
Translates to: NEQGLHQLSFLVQSLTMLQTSPS*HTKQSY
Trigger: ATATGACTGCTTGGTATGGCATGATGGCGAAGTCTG...TAACATTGTCAAAGACTGAACTAGGAAAGAAAGCTGATGTAATCCCTGTTCATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651448.1
3UTR-3UTR CCA 90 bp TTTTCATTCGTTCCTTTTCAGCATCCAATTGATGAAGTCGTGCAACGTACAGAGAAAGATTCAGCTGTCTaGCACTTACACATGTATTCA +
Preference number: 2 (lower is better)
Translates to: FSFVPFQHPIDEVVQRTEKDSAV*HLHMYS
Trigger: TGAATACATGTGTAAGTGCCAGACAGCTGAATCTTT...CTCTGTACGTTGCACGACTTCATCAATTGGATGCTGAAAAGGAACGAATGAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000651448.1
ENST00000651748.1
3UTR CAA 90 bp TGTCAAATTCAGATTCATATAATAGTTCACAAAGTAGTGGGCAGCTaGGAGTTACTTCCCCACTCTTGGGTTGATGAAAGTTATATGTCA +
Preference number: 2 (lower is better)
Translates to: CQIQIHIIVHKVVGS*ELLPHSWVDESYMS
Trigger: TGACATATAACTTTCATCAACCCAAGAGTGGGGAAGTAACTCCAAGCTGCCCACTACTTTGTGAACTATTATATGAATCTGAATTTGACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000651448.1
ENST00000651748.1
3UTR-3UTR TCA 90 bp GGCTGTTTGATCTATATGAGAAATAACAGCATTTGCCGCATCAACAATTTCATTTTCATTCTGATGCTCTaGACCTCAAGAGGATGTGAA +
Preference number: 2 (lower is better)
Translates to: GCLIYMRNNSICRINNFIFILML*TSRGCE
Trigger: TTCACATCCTCTTGAGGTTCAGAGCATCAGAATGAA...AATGAAATTGTTGATGCGGCAAATGCTGTTATTTCTCATATAGATCAAACAGCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000651448.1
ENST00000651748.1
3UTR-3UTR GCA 90 bp TGTATCTTTACAATACCTGATAAAGATTCAGCTGTCTGGCACTTACACATGTATTTATTGAAGCAGTTATaGTCCAGCAACTGCCACTCA +
Preference number: 2 (lower is better)
Translates to: CIFTIPDKDSAVWHLHMYLLKQL*SSNCHS
Trigger: TGAGTGGCAGTTGCTGGAGCATAACTGCTTCAATAA...ATACATGTGTAAGTGCCAGACAGCTGAATCTTTATCAGGTATTGTAAAGATACA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376052.5
ENST00000651448.1
ENST00000651544.1
ENST00000651748.1
3UTR-3UTR GCA 90 bp CATATCATATGTGTATCTTTACAATACCTGATAAAGATTCAGCTGTCTGGCACTTTATTGAAGCAGTTATaGTCCAGCAACTGCCACTCA +
Preference number: 2 (lower is better)
Translates to: HIICVSLQYLIKIQLSGTLLKQL*SSNCHS
Trigger: TGAGTGGCAGTTGCTGGAGCATAACTGCTTCAATAA...AGTGCCAGACAGCTGAATCTTTATCAGGTATTGTAAAGATACACATATGATATG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376052.5
ENST00000651448.1
ENST00000651544.1
ENST00000651748.1
3UTR-3UTR GCA 90 bp TTGGTGGAGGTATTAAGTAGTAATGAACAGGGATTACATCAGCTTTCTTTCCTACCCACCAACGAGCAATaGAAAATTCAATTGCTTTTC +
Preference number: 2 (lower is better)
Translates to: LVEVLSSNEQGLHQLSFLPTNEQ*KIQLLF
Trigger: GAAAAGCAATTGAATTTTGCATTGCTCGTTGGTGGG...TAGGAAAGAAAGCTGATGTAATCCCTGTTCATTACTACTTAATACCTCCACCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000651448.1
ENST00000651748.1
3UTR-3UTR CCA 90 bp CATATCATATGTGTATCTTTACAATACCTGATAAAGATTCAGCTGTCTGGCACTCTTTGCTTCACAAGCTaGACTGCATGTAGAACAAAC +
Preference number: 2 (lower is better)
Translates to: HIICVSLQYLIKIQLSGTLCFTS*TACRTN
Trigger: GTTTGTTCTACATGCAGTCCAGCTTGTGAAGCAAAG...AGTGCCAGACAGCTGAATCTTTATCAGGTATTGTAAAGATACACATATGATATG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651448.1
ENST00000651748.1
3UTR-3UTR CCA 90 bp ATTTGCCGCATCAACAATTTCATTAAGTCTTTTCATTCGTTCCTTTTCAGCATCCTTTGCTTCACAAGCTaGACTGCATGTAGAACAAAC +
Preference number: 2 (lower is better)
Translates to: ICRINNFIKSFHSFLFSILCFTS*TACRTN
Trigger: GTTTGTTCTACATGCAGTCCAGCTTGTGAAGCAAAG...GATGCTGAAAAGGAACGAATGAAAAGACTTAATGAAATTGTTGATGCGGCAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000651448.1
ENST00000651748.1
3UTR-3UTR CCA 90 bp TCTTTAAGGCGTTCCAAATCACTGATTTGCTCATGGCGAATCTGTAGTCGAATTCAGTGTTCCTTTCTCTaGAAGAGAACAAAACTTATA +
Preference number: 2 (lower is better)
Translates to: SLRRSKSLICSWRICSRIQCSFL*KRTKLI
Trigger: TATAAGTTTTGTTCTCTTCCAGAGAAAGGAACACTG...AATTCGACTACAGATTCGCCATGAGCAAATCAGTGATTTGGAACGCCTTAAAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000651448.1
ENST00000651748.1
3UTR-3UTR CCA 90 bp AGATTCAGCTGTCTGGCACTTACACATGTATTCATAGAGTTCATTCTGATGCTCGTAACAAAGAATGGCTaGTTATATTTGGGTGGTAAT +
Preference number: 2 (lower is better)
Translates to: RFSCLALTHVFIEFILMLVTKNG*LYLGGN
Trigger: ATTACCACCCAAATATAACCAGCCATTCTTTGTTAC...GAGCATCAGAATGAACTCTATGAATACATGTGTAAGTGCCAGACAGCTGAATCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651448.1
ENST00000651748.1
3UTR-3UTR CCA 90 bp TATATTTGGGTGGTAATGTCAAATTGCTTGATTTCTTCTTCCCTAGAAGTGCAAAACTGTAGACAGGCATaGACCATTATTTCCAGCACT +
Preference number: 2 (lower is better)
Translates to: YIWVVMSNCLISSSLEVQNCRQA*TIISST
Trigger: AGTGCTGGAAATAATGGTCCATGCCTGTCTACAGTT...TTGCACTTCTAGGGAAGAAGAAATCAAGCAATTTGACATTACCACCCAAATATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651448.1
3UTR-3UTR TCA 90 bp TTAAGAAAACACCATGATGTCAGAGGTCTAGATTTACATGTATTAAGCCACACGGCATATGGTGTACTGTaGTCTTGGTTTTGCAAATTT +
Preference number: 2 (lower is better)
Translates to: LRKHHDVRGLDLHVLSHTAYGVL*SWFCKF
Trigger: AAATTTGCAAAACCAAGATCACAGTACACCATATGC...CGTGTGGCTTAATACATGTAAATCTAGACCTCTGACATCATGGTGTTTTCTTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376052.5
ENST00000651544.1
ENST00000651748.1
3UTR-3UTR TCA 90 bp TCTATGAGAAACAATAAATGGAAGGTCTTTAAGGCGTTCCAAATCACTGATTTGTATTTCAAGGAGGACTaGACATCAAAGCGGTTGATT +
Preference number: 2 (lower is better)
Translates to: SMRNNKWKVFKAFQITDLYFKED*TSKRLI
Trigger: AATCAACCGCTTTGATGTTCAGTCCTCCTTGAAATA...CAAATCAGTGATTTGGAACGCCTTAAAGACCTTCCATTTATTGTTTCTCATAGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651448.1
ENST00000651748.1
3UTR-3UTR TCA 90 bp GGTATTAGACAATCTATGAGAAACAATAAATGGAAGGTCTTTAAGGCGTTCCAACTCCGTAACTGTAGTTaGCAAGATCACACTTATGAT +
Preference number: 2 (lower is better)
Translates to: GIRQSMRNNKWKVFKAFQLRNCS*QDHTYD
Trigger: ATCATAAGTGTGATCTTGTCAACTACAGTTACGGAG...TTGGAACGCCTTAAAGACCTTCCATTTATTGTTTCTCATAGATTGTCTAATACC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651448.1
3UTR-3UTR TCA 90 bp CATATCATATGTGTATCTTTACAATACCTGATAAAGATTCAGCTGTCTGGCACTATCCTAACACTAGGGTaGCAACTAAAAGTGTTGCAA +
Preference number: 2 (lower is better)
Translates to: HIICVSLQYLIKIQLSGTILTLG*QLKVLQ
Trigger: TTGCAACACTTTTAGTTGTCACCCTAGTGTTAGGAT...AGTGCCAGACAGCTGAATCTTTATCAGGTATTGTAAAGATACACATATGATATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651448.1
3UTR-3UTR GCA 90 bp CATATCATATGTGTATCTTTACAATACCTGATAAAGATTCAGCTGTCTGGCACTATTAAGGTACCAGAGTaGATATGGTGTACTGTGATC +
Preference number: 2 (lower is better)
Translates to: HIICVSLQYLIKIQLSGTIKVPE*IWCTVI
Trigger: GATCACAGTACACCATATGCACTCTGGTACCTTAAT...AGTGCCAGACAGCTGAATCTTTATCAGGTATTGTAAAGATACACATATGATATG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376052.5
ENST00000651748.1
3UTR-3UTR GCA 90 bp ATTTGCCGCATCAACAATTTCATTAAGTCTTTTCATTCGTTCCTTTTCAGCATCTCCAAATCACTGATTTaGTCATGGCGAATCTGTAGT +
Preference number: 2 (lower is better)
Translates to: ICRINNFIKSFHSFLFSISKSLI*SWRICS
Trigger: ACTACAGATTCGCCATGAGCAAATCAGTGATTTGGA...GATGCTGAAAAGGAACGAATGAAAAGACTTAATGAAATTGTTGATGCGGCAAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000651448.1
ENST00000651748.1
3UTR-3UTR GCA 90 bp GGCTGTTTGATCTATATGAGAAATAACAGCATTTGCCGCATCAACAATTTCATTCAATTGATGAAGTCGTaGAACGTACAGAGGAAGATA +
Preference number: 2 (lower is better)
Translates to: GCLIYMRNNSICRINNFIQLMKS*NVQRKI
Trigger: TATCTTCCTCTGTACGTTGCACGACTTCATCAATTG...AATGAAATTGTTGATGCGGCAAATGCTGTTATTTCTCATATAGATCAAACAGCC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000651448.1
ENST00000651748.1
ENST00000651921.1
3UTR-3UTR CCA 90 bp GGTATTAGACAATCTATGAGAAACAATAAATGGAAGGTCTTTAAGGCGTTCCAATCACTGATTTGCTCATaGCGAATCTGTAGTCGAATT +
Preference number: 2 (lower is better)
Translates to: GIRQSMRNNKWKVFKAFQSLICS*RICSRI
Trigger: AATTCGACTACAGATTCGCCATGAGCAAATCAGTGA...TTGGAACGCCTTAAAGACCTTCCATTTATTGTTTCTCATAGATTGTCTAATACC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651448.1
ENST00000651748.1
3UTR-3UTR TCA 90 bp ATTTGCCGCATCAACAATTTCATTAAGTCTTTTCATTCGTTCCTTTTCAGCATCAAGATGAAGATTTATTaGAGCAGTTATGCTCCAGCA +
Preference number: 2 (lower is better)
Translates to: ICRINNFIKSFHSFLFSIKMKIY*SSYAPA
Trigger: TGCTGGAGCATAACTGCTTCAATAAATCTTCATCTT...GATGCTGAAAAGGAACGAATGAAAAGACTTAATGAAATTGTTGATGCGGCAAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000651448.1
ENST00000651748.1
3UTR-3UTR TCA 90 bp GGTATTAGACAATCTATGAGAAACAATAAATGGAAGGTCTTTAAGGCGTTCCAATTGTATCACCAATCTTaGTGGAAAGAATTTGAGCAC +
Preference number: 2 (lower is better)
Translates to: GIRQSMRNNKWKVFKAFQLYHQS*WKEFEH
Trigger: GTGCTCAAATTCTTTCCATCAAGATTGGTGATACAA...TTGGAACGCCTTAAAGACCTTCCATTTATTGTTTCTCATAGATTGTCTAATACC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651448.1
3UTR-3UTR CCA 90 bp CATATCATATGTGTATCTTTACAATACCTGATAAAGATTCAGCTGTCTGGCACTAAAGATTCAGCTGTCTaGCACTTACACATGTATTCA +
Preference number: 2 (lower is better)
Translates to: HIICVSLQYLIKIQLSGTKDSAV*HLHMYS
Trigger: TGAATACATGTGTAAGTGCCAGACAGCTGAATCTTT...AGTGCCAGACAGCTGAATCTTTATCAGGTATTGTAAAGATACACATATGATATG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376052.5
ENST00000651448.1
ENST00000651544.1
ENST00000651748.1
3UTR-3UTR CCA 90 bp CATATCATATGTGTATCTTTACAATACCTGATAAAGATTCAGCTGTCTGGCACTTCTCCATTCTCTTACTaGACTAAACCTATACAAATG +
Preference number: 2 (lower is better)
Translates to: HIICVSLQYLIKIQLSGTSPFSY*TKPIQM
Trigger: CATTTGTATAGGTTTAGTCCAGTAAGAGAATGGAGA...AGTGCCAGACAGCTGAATCTTTATCAGGTATTGTAAAGATACACATATGATATG
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376052.5
3UTR-3UTR CCA 90 bp TTATTGTCAAAGAGATCAGTCCATTTAGTAGTTTCCCAAAATGTTTCTGCCAGACAGTGTTCCTTTCTCTaGAAGAGAACAAAACTTATA +
Preference number: 2 (lower is better)
Translates to: LLSKRSVHLVVSQNVSARQCSFL*KRTKLI
Trigger: TATAAGTTTTGTTCTCTTCCAGAGAAAGGAACACTG...TCTGGCAGAAACATTTTGGGAAACTACTAAATGGACTGATCTCTTTGACAATAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000651448.1
ENST00000651748.1
3UTR-3UTR CAA 90 bp CCAGACCCCTGCTGCTCACCAGATGGCAGGGGCCACACTCAGCCCTCCTCCTGGAAAGTAGTGGGCAGCTaGGAGTTACTTCCCCACTCT +
Preference number: 3 (lower is better)
Translates to: PDPCCSPDGRGHTQPSSWKVVGS*ELLPHS
Trigger: AGAGTGGGGAAGTAACTCCAAGCTGCCCACTACTTT...CCAGGAGGAGGGCTGAGTGTGGCCCCTGCCATCTGGTGAGCAGCAGGGGTCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000651448.1
3UTR-3UTR CAA 90 bp ACCCAACTCGAAGTCCTAGGTGCTGGCAGGCAGGGCACATCCCCGTGCCAGCAATCACTTCAGCCCATGTaGCACCCTCAGGAACCTCAA +
Preference number: 3 (lower is better)
Translates to: TQLEVLGAGRQGTSPCQQSLQPM*HPQEPQ
Trigger: TTGAGGTTCCTGAGGGTGCAACATGGGCTGAAGTGA...TTGCTGGCACGGGGATGTGCCCTGCCTGCCAGCACCTAGGACTTCGAGTTGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000651448.1
ENST00000651748.1
3UTR GCA 72 bp CATGTCATAAGCTGCAACCCAACTCGAAGTCCTAGGTaGTGGCAGGCAGGGCACATCCCCGTGCCAGCAATG +
Preference number: 3 (lower is better)
Translates to: HVISCNPTRSPR*WQAGHIPVPAM
Trigger: CATTGCTGGCACGGGGATGTGCCCTGCCTGCCAGCACCTAGGACTTCGAGTTGGGTTGCAGCTTATGACATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376052.5
ENST00000651448.1
ENST00000651544.1
ENST00000651748.1
3UTR CCA 72 bp CAGTGTCCAGTTAGGAACAGAAGCAATGGCTCCTCCTaGCGCACTGATACTCACACCAAGGGCCCCGTCAGC +
Preference number: 3 (lower is better)
Translates to: QCPVRNRSNGSS*RTDTHTKGPVS
Trigger: GCTGACGGGGCCCTTGGTGTGAGTATCAGTGCGCCAGGAGGAGCCATTGCTTCTGTTCCTAACTGGACACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651448.1
3UTR-3UTR CAA 90 bp GCAACCCAACTCGAAGTCCTAGGTGCTGGCAGGCAGGGCACATCCCCGTGCCAGTGGGATCAGTCTTCATaGCAATATAAACTGCTAGGG +
Preference number: 3 (lower is better)
Translates to: ATQLEVLGAGRQGTSPCQWDQSS*QYKLLG
Trigger: CCCTAGCAGTTTATATTGCAATGAAGACTGATCCCA...CTGGCACGGGGATGTGCCCTGCCTGCCAGCACCTAGGACTTCGAGTTGGGTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000651448.1
ENST00000651748.1
3UTR-3UTR CAA 90 bp CAACTCGAAGTCCTAGGTGCTGGCAGGCAGGGCACATCCCCGTGCCAGCAATGTGCAACTGCCACTCATTaGTGCTGGTTCTACTTTTTC +
Preference number: 3 (lower is better)
Translates to: QLEVLGAGRQGTSPCQQCATATH*CWFYFF
Trigger: GAAAAAGTAGAACCAGCACAAATGAGTGGCAGTTGC...ACATTGCTGGCACGGGGATGTGCCCTGCCTGCCAGCACCTAGGACTTCGAGTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376052.5
ENST00000651448.1
ENST00000651544.1
ENST00000651748.1
3UTR TCA 72 bp ACTTTGCTGGTCAGGTGGGACAGTGAAGCTAGAAGCTaGTACTGGGGCTGCCTTGCAGAGATCTGCTGGCAA +
Preference number: 3 (lower is better)
Translates to: TLLVRWDSEARS*YWGCLAEICWQ
Trigger: TTGCCAGCAGATCTCTGCAAGGCAGCCCCAGTATCAGCTTCTAGCTTCACTGTCCCACCTGACCAGCAAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651448.1
3UTR-3UTR CAA 90 bp GCAACCCAACTCGAAGTCCTAGGTGCTGGCAGGCAGGGCACATCCCCGTGCCAGTACGAGGGTGGATTTTaGTTTGTCCATGTCATTTTT +
Preference number: 3 (lower is better)
Translates to: ATQLEVLGAGRQGTSPCQYEGGF*FVHVIF
Trigger: AAAAATGACATGGACAAACAAAAATCCACCCTCGTA...CTGGCACGGGGATGTGCCCTGCCTGCCAGCACCTAGGACTTCGAGTTGGGTTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000651448.1
ENST00000651748.1
3UTR TCA 72 bp CTCCGGAAATACAGGTTCAATGCCAACGCCATGATCTaGAGGTGCAGCCACCTGAACAGGATCTCGGAGGTA +
Preference number: 3 (lower is better)
Translates to: LRKYRFNANAMI*RCSHLNRISEV
Trigger: TACCTCCGAGATCCTGTTCAGGTGGCTGCACCTTCAGATCATGGCGTTGGCATTGAACCTGTATTTCCGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651448.1
3UTR TCA 72 bp CGAGGGTGGATTTTTGTTTGTCCATGTCACTGTGTCTaGGCACTCCTTTCATCCGTCGCTCGGCCAGAGTCT +
Preference number: 3 (lower is better)
Translates to: RGWIFVCPCHCV*ALLSSVARPES
Trigger: AGACTCTGGCCGAGCGACGGATGAAAGGAGTGCTCAGACACAGTGACATGGACAAACAAAAATCCACCCTCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651921.1
3UTR-3UTR CAA 90 bp TGCTGGTCAGGTGGGACAGTGAAGCTAGAAGCTGATACTGGGGCTGCCTTGCAGGGATGTGAAAATGACTaGCCTGTAATTACCCCAAGA +
Preference number: 3 (lower is better)
Translates to: CWSGGTVKLEADTGAALQGCEND*PVITPR
Trigger: TCTTGGGGTAATTACAGGCAAGTCATTTTCACATCC...CTGCAAGGCAGCCCCAGTATCAGCTTCTAGCTTCACTGTCCCACCTGACCAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000651448.1
3UTR TCA 72 bp AGTGTCTTTAGCTGGGCTGGCAGGGGCAGTCTACAATaGCAGCGCAAAGCAAAGCTTTCTGATCCATGTGGA +
Preference number: 3 (lower is better)
Translates to: SVFSWAGRGSLQ*QRKAKLSDPCG
Trigger: TCCACATGGATCAGAAAGCTTTGCTTTGCGCTGTCATTGTAGACTGCCCCTGCCAGCCCAGCTAAAGACACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493770.2
3UTR TCA 72 bp CAGGTCAAGGTGCCCTGCTTTTGTAAGGGGAGCTGCTaGGGCACAAACAGCAGGCTACAGTACTTAAGTTTC +
Preference number: 3 (lower is better)
Translates to: QVKVPCFCKGSC*GTNSRLQYLSF
Trigger: GAAACTTAAGTACTGTAGCCTGCTGTTTGTGCCTCAGCAGCTCCCCTTACAAAAGCAGGGCACCTTGACCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651448.1
3UTR-3UTR CAA 90 bp CGAACACACTGTCACTTCAGCCCATGTTGCACCCTCAGGAACCTCAATAAAATGTCACTTCAGCCCATGTaGCACCCTCAGGAACCTCAA +
Preference number: 3 (lower is better)
Translates to: RTHCHFSPCCTLRNLNKMSLQPM*HPQEPQ
Trigger: TTGAGGTTCCTGAGGGTGCAACATGGGCTGAAGTGA...CATTTTATTGAGGTTCCTGAGGGTGCAACATGGGCTGAAGTGACAGTGTGTTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000651448.1
ENST00000651748.1
3UTR TCA 72 bp AGACAGGTTCTGATTTGTACCCCTTGTGCAAACTGTTaGCAGTACTGTGTTGTGTGCAGCACAGACCTCCCC +
Preference number: 3 (lower is better)
Translates to: RQVLICTPCANC*QYCVVCSTDLP
Trigger: GGGGAGGTCTGTGCTGCACACAACACAGTACTGTCAACAGTTTGCACAAGGGGTACAAATCAGAACCTGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651448.1
3UTR GCA 72 bp CTGGGCGCAGTGTTTGGACCCAGTTCTTCAAAGTTATaGAGGGAGCCAGATCTTCGTATTTCAAGGAGGACT +
Preference number: 3 (lower is better)
Translates to: LGAVFGPSSSKL*REPDLRISRRT
Trigger: AGTCCTCCTTGAAATACGAAGATCTGGCTCCCTGCATAACTTTGAAGAACTGGGTCCAAACACTGCGCCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651748.1
3UTR GCA 72 bp TTAGAATCAATGCAGGCTCTCCAGACTTCGCCATCATaGCATACCAAGCAGTCATATACAGGGCCAGGATCG +
Preference number: 3 (lower is better)
Translates to: LESMQALQTSPS*HTKQSYTGPGS
Trigger: CGATCCTGGCCCTGTATATGACTGCTTGGTATGGCATGATGGCGAAGTCTGGAGAGCCTGCATTGATTCTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651448.1
3UTR CCA 72 bp AGCACCAGGAGCTACCCCATTCCGTTCAGGTTCTTCTaGAAAGTGTCCAGCAGCTATACTAGCTACATGTGT +
Preference number: 3 (lower is better)
Translates to: STRSYPIPFRFF*KVSSSYTSYMC
Trigger: ACACATGTAGCTAGTATAGCTGCTGGACACTTTCCAGAAGAACCTGAACGGAATGGGGTAGCTCCTGGTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651448.1
3UTR-3UTR CAA 90 bp TCAGGTGGGACAGTGAAGCTAGAAGCTGATACTGGGGCTGCCTTGCAGAGATCTCATGTAGAACAAACTTaGCTGACACCTCAGAAGAAC +
Preference number: 3 (lower is better)
Translates to: SGGTVKLEADTGAALQRSHVEQT*LTPQKN
Trigger: GTTCTTCTGAGGTGTCAGCAAAGTTTGTTCTACATG...AGATCTCTGCAAGGCAGCCCCAGTATCAGCTTCTAGCTTCACTGTCCCACCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651448.1
3UTR-3UTR CAA 90 bp CGAACACACTGTCACTTCAGCCCATGTTGCACCCTCAGGAACCTCAATAAAATGGCTTCGATATGCTCTTaGCTTCACAAGCTGGACTGC +
Preference number: 3 (lower is better)
Translates to: RTHCHFSPCCTLRNLNKMASICS*LHKLDC
Trigger: GCAGTCCAGCTTGTGAAGCAAAGAGCATATCGAAGC...CATTTTATTGAGGTTCCTGAGGGTGCAACATGGGCTGAAGTGACAGTGTGTTCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000651448.1
ENST00000651748.1
3UTR TCA 72 bp GGGCAGTCTACAATGACAGCGCAAAGCAAAGCTTTCTaGTCCATGTGGATATCCACGGCCTGGTTGTTTTCA +
Preference number: 3 (lower is better)
Translates to: GQSTMTAQSKAF*SMWISTAWLFS
Trigger: TGAAAACAACCAGGCCGTGGATATCCACATGGATCAGAAAGCTTTGCTTTGCGCTGTCATTGTAGACTGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493770.2
3UTR GCA 72 bp CAGAGTTTTCTGTGTTCTCCGGAAATACAGGTTCAATaGCAACGCCATGATCTGAAGGTGCAGCCACCTGAA +
Preference number: 3 (lower is better)
Translates to: QSFLCSPEIQVQ*QRHDLKVQPPE
Trigger: TTCAGGTGGCTGCACCTTCAGATCATGGCGTTGGCATTGAACCTGTATTTCCGGAGAACACAGAAAACTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651448.1
3UTR GCA 72 bp TATAACTGCAGTGATCGGAACTCTGAAGAGCGGACCTaGGTTAGGGGATGCTATATCATAGCCACATACCTC +
Preference number: 3 (lower is better)
Translates to: YNCSDRNSEERT*VRGCYIIATYL
Trigger: GAGGTATGTGGCTATGATATAGCATCCCCTAACGCAGGTCCGCTCTTCAGAGTTCCGATCACTGCAGTTATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651448.1
3UTR-3UTR CAA 90 bp AGTTATGCAGGGAGCCAGATCTTCGTATTTCAAGGAGGACTGAACATCAAAGCGGCTTCGATATGCTCTTaGCTTCACAAGCTGGACTGC +
Preference number: 3 (lower is better)
Translates to: SYAGSQIFVFQGGLNIKAASICS*LHKLDC
Trigger: GCAGTCCAGCTTGTGAAGCAAAGAGCATATCGAAGC...CGCTTTGATGTTCAGTCCTCCTTGAAATACGAAGATCTGGCTCCCTGCATAACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651448.1
ENST00000651748.1
3UTR GCA 72 bp GATCGGAACTCTGAAGAGCGGACCTGCGTTAGGGGATaGTATATCATAGCCACATACCTCTGTATAATGCAA +
Preference number: 3 (lower is better)
Translates to: DRNSEERTCVRG*YIIATYLCIMQ
Trigger: TTGCATTATACAGAGGTATGTGGCTATGATATAGCATCCCCTAACGCAGGTCCGCTCTTCAGAGTTCCGATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651448.1
3UTR GCA 72 bp GATACCGCAGTGTTTGGACCCAGTTCTTCAAAGTTATaGAGGGAGCCAGATCTTCGTATTTCAAGGAGGACT +
Preference number: 3 (lower is better)
Translates to: DTAVFGPSSSKL*REPDLRISRRT
Trigger: AGTCCTCCTTGAAATACGAAGATCTGGCTCCCTGCATAACTTTGAAGAACTGGGTCCAAACACTGCGGTATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651448.1
3UTR CCA 72 bp AGAGAGAACATGCATGTAGCTTTCATGGATAGACTTTaGACCCTAGCTAGCCCAGAAGGTGTGACCAATATG +
Preference number: 3 (lower is better)
Translates to: RENMHVAFMDRL*TLASPEGVTNM
Trigger: CATATTGGTCACACCTTCTGGGCTAGCTAGGGTCCAAAGTCTATCCATGAAAGCTACATGCATGTTCTCTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376052.5
3UTR-3UTR CAA 90 bp GCTCCAGCAACTGCCACTCATTTGTGCTGGTTCTACTTTTTCCCCTTAATTGAAATCAGCCGTATAACCTaGGGAAGTCATCCTACCTTT +
Preference number: 3 (lower is better)
Translates to: APATATHLCWFYFFPLIEISRIT*GSHPTF
Trigger: AAAGGTAGGATGACTTCCCAAGGTTATACGGCTGAT...TTCAATTAAGGGGAAAAAGTAGAACCAGCACAAATGAGTGGCAGTTGCTGGAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376052.5
3UTR-3UTR CAA 90 bp AGATTCAGCTGTCTGGCACTTACACATGTATTCATAGAGTTCATTCTGATGCTCAAAGTAGTGGGCAGCTaGGAGTTACTTCCCCACTCT +
Preference number: 3 (lower is better)
Translates to: RFSCLALTHVFIEFILMLKVVGS*ELLPHS
Trigger: AGAGTGGGGAAGTAACTCCAAGCTGCCCACTACTTT...GAGCATCAGAATGAACTCTATGAATACATGTGTAAGTGCCAGACAGCTGAATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000651448.1
ENST00000651748.1
3UTR TCA 72 bp CTTAGTCTTGTATCACCAATCTTGATGGAAAGAATTTaGGCACCAGGAGCTACCCCATTCCGTTCAGGTTCT +
Preference number: 3 (lower is better)
Translates to: LSLVSPILMERI*APGATPFRSGS
Trigger: AGAACCTGAACGGAATGGGGTAGCTCCTGGTGCTCAAATTCTTTCCATCAAGATTGGTGATACAAGACTAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651448.1
3UTR-3UTR CAA 90 bp AATGGAAGGTCTTTAAGGCGTTCCAAATCACTGATTTGCTCATGGCGAATCTGTGCAACTGCCACTCATTaGTGCTGGTTCTACTTTTTC +
Preference number: 3 (lower is better)
Translates to: NGRSLRRSKSLICSWRICATATH*CWFYFF
Trigger: GAAAAAGTAGAACCAGCACAAATGAGTGGCAGTTGC...ACAGATTCGCCATGAGCAAATCAGTGATTTGGAACGCCTTAAAGACCTTCCATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000651448.1
ENST00000651748.1
3UTR-3UTR CAA 90 bp AGATTTATTGAAGCAGTTATGCTCCAGCAACTGCCACTCATTTGTGCTGGTTCTGCAACTGCCACTCATTaGTGCTGGTTCTACTTTTTC +
Preference number: 3 (lower is better)
Translates to: RFIEAVMLQQLPLICAGSATATH*CWFYFF
Trigger: GAAAAAGTAGAACCAGCACAAATGAGTGGCAGTTGC...AGAACCAGCACAAATGAGTGGCAGTTGCTGGAGCATAACTGCTTCAATAAATCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376052.5
ENST00000651448.1
ENST00000651544.1
ENST00000651748.1
3UTR-3UTR CAA 90 bp CTGACTTTTGGCTCTTCTCCTAAGCCACTCTTATTGAGTGTCTTTAGCTGGGCTATATCCACGGCCTGGTaGTTTTCAATGACACTTTAT +
Preference number: 3 (lower is better)
Translates to: LTFGSSPKPLLLSVFSWAISTAW*FSMTLY
Trigger: ATAAAGTGTCATTGAAAACAACCAGGCCGTGGATAT...AGCCCAGCTAAAGACACTCAATAAGAGTGGCTTAGGAGAAGAGCCAAAAGTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493770.2
3UTR-3UTR CAA 90 bp TGTTGCAAGACAGGTTCTGATTTGTACCCCTTGTGCAAACTGTTGACAGTACTGTTCCCCACTCTTGGGTaGATGAAAGTTATATGTCAG +
Preference number: 3 (lower is better)
Translates to: CCKTGSDLYPLCKLLTVLFPTLG*MKVICQ
Trigger: CTGACATATAACTTTCATCAACCCAAGAGTGGGGAA...CAGTACTGTCAACAGTTTGCACAAGGGGTACAAATCAGAACCTGTCTTGCAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651448.1
3UTR-3UTR CAA 90 bp AGACTTGCCCACCAACGAGCAATGCAAAATTCAATTGCTTTTCCACCTAGGACACTTTTCAGCATCCAATaGATGAAGTCGTGCAACGTA +
Preference number: 3 (lower is better)
Translates to: RLAHQRAMQNSIAFPPRTLFSIQ*MKSCNV
Trigger: TACGTTGCACGACTTCATCAATTGGATGCTGAAAAG...TGTCCTAGGTGGAAAAGCAATTGAATTTTGCATTGCTCGTTGGTGGGCAAGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000651448.1
ENST00000651748.1
3UTR-3UTR CAA 90 bp TGCAAATGTCAAAACCTTATTGTCAAAGAGATCAGTCCATTTAGTAGTTTCCCAGGAAATGGCTCCGTCTaGAGCCTGGGTGTGAAGAAG +
Preference number: 3 (lower is better)
Translates to: CKCQNLIVKEISPFSSFPGNGSV*SLGVKK
Trigger: CTTCTTCACACCCAGGCTCAAGACGGAGCCATTTCC...TGGGAAACTACTAAATGGACTGATCTCTTTGACAATAAGGTTTTGACATTTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000651448.1
ENST00000651748.1
ENST00000651921.1
3UTR TCA 72 bp CTTCGTATTTCAAGGAGGACTGAACATCAAAGCGGTTaGTTCCTTCCGATGCATGAATGTTTAACTGAGGAG +
Preference number: 3 (lower is better)
Translates to: LRISRRTEHQSG*FLPMHECLTEE
Trigger: CTCCTCAGTTAAACATTCATGCATCGGAAGGAATCAACCGCTTTGATGTTCAGTCCTCCTTGAAATACGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651448.1
ENST00000651748.1
3UTR TCA 72 bp CTGTTTCCATTGTGCTTAGTCTTGTATCACCAATCTTaGTGGAAAGAATTTGAGCACCAGGAGCTACCCCAT +
Preference number: 3 (lower is better)
Translates to: LFPLCLVLYHQS*WKEFEHQELPH
Trigger: ATGGGGTAGCTCCTGGTGCTCAAATTCTTTCCATCAAGATTGGTGATACAAGACTAAGCACAATGGAAACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651448.1
3UTR TCA 72 bp GATCCACACGTATGTTTATGTGTCTACATTGATTCATaGGTTCCAAATGGCTGGGACACTGAACCCAAGATG +
Preference number: 3 (lower is better)
Translates to: DPHVCLCVYIDS*VPNGWDTEPKM
Trigger: CATCTTGGGTTCAGTGTCCCAGCCATTTGGAACTCATGAATCAATGTAGACACATAAACATACGTGTGGATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651448.1
3UTR-3UTR CAA 90 bp ATTTGCCGCATCAACAATTTCATTAAGTCTTTTCATTCGTTCCTTTTCAGCATCCACTGGGCGCAGTGTTaGGACCCAGTTCTTCAAAGT +
Preference number: 3 (lower is better)
Translates to: ICRINNFIKSFHSFLFSIHWAQC*DPVLQS
Trigger: ACTTTGAAGAACTGGGTCCAAACACTGCGCCCAGTG...GATGCTGAAAAGGAACGAATGAAAAGACTTAATGAAATTGTTGATGCGGCAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651748.1
3UTR-3UTR CAA 90 bp GTATTTCAAGGAGGACTGAACATCAAAGCGGTTGATTCCTTCCGATGCATGAATTTGATCCTAAAGGTTTaGTTTTTGCACTCACTGGGC +
Preference number: 3 (lower is better)
Translates to: VFQGGLNIKAVDSFRCMNLILKV*FLHSLG
Trigger: GCCCAGTGAGTGCAAAAACAAAACCTTTAGGATCAA...ATTCATGCATCGGAAGGAATCAACCGCTTTGATGTTCAGTCCTCCTTGAAATAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000651448.1
ENST00000651748.1
3UTR-3UTR CAA 90 bp TGTTGCAAGACAGGTTCTGATTTGTACCCCTTGTGCAAACTGTTGACAGTACTGTTCCTAGTTCAGTCTTaGACAATGTTAAGGATCCTG +
Preference number: 3 (lower is better)
Translates to: CCKTGSDLYPLCKLLTVLFLVQS*TMLRIL
Trigger: CAGGATCCTTAACATTGTCAAAGACTGAACTAGGAA...CAGTACTGTCAACAGTTTGCACAAGGGGTACAAATCAGAACCTGTCTTGCAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651448.1
3UTR-3UTR CAA 90 bp AGACTTGCCCACCAACGAGCAATGCAAAATTCAATTGCTTTTCCACCTAGGACATTCCTAGTTCAGTCTTaGACAATGTTAAGGATCCTG +
Preference number: 3 (lower is better)
Translates to: RLAHQRAMQNSIAFPPRTFLVQS*TMLRIL
Trigger: CAGGATCCTTAACATTGTCAAAGACTGAACTAGGAA...TGTCCTAGGTGGAAAAGCAATTGAATTTTGCATTGCTCGTTGGTGGGCAAGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000651448.1
ENST00000651748.1
3UTR GCA 72 bp TACTTCACAAATTCTCCCAGAATTTGGCCAGTGAGTTaGTTCTCCGTAACTGTAGTTGACAAGATCACACTT +
Preference number: 3 (lower is better)
Translates to: YFTNSPRIWPVS*FSVTVVDKITL
Trigger: AAGTGTGATCTTGTCAACTACAGTTACGGAGAAGCAACTCACTGGCCAAATTCTGGGAGAATTTGTGAAGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651448.1
3UTR-3UTR CAA 90 bp AGATTTATTGAAGCAGTTATGCTCCAGCAACTGCCACTCATTTGTGCTGGTTCTCAAGATGAAGATTTATaGAAGCAGTTATGCTCCAGC +
Preference number: 3 (lower is better)
Translates to: RFIEAVMLQQLPLICAGSQDEDL*KQLCSS
Trigger: GCTGGAGCATAACTGCTTCAATAAATCTTCATCTTG...AGAACCAGCACAAATGAGTGGCAGTTGCTGGAGCATAACTGCTTCAATAAATCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376052.5
ENST00000651448.1
ENST00000651544.1
ENST00000651748.1
3UTR-3UTR CAA 90 bp AGATTCAGCTGTCTGGCACTTACACATGTATTCATAGAGTTCATTCTGATGCTCGGATGTGAAAATGACTaGCCTGTAATTACCCCAAGA +
Preference number: 3 (lower is better)
Translates to: RFSCLALTHVFIEFILMLGCEND*PVITPR
Trigger: TCTTGGGGTAATTACAGGCAAGTCATTTTCACATCC...GAGCATCAGAATGAACTCTATGAATACATGTGTAAGTGCCAGACAGCTGAATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376052.5
ENST00000651448.1
ENST00000651544.1
ENST00000651748.1
3UTR-3UTR CAA 90 bp AGACTTGCCCACCAACGAGCAATGCAAAATTCAATTGCTTTTCCACCTAGGACAAAAATGCCTTCGAATTaGACCAGGTTTAAAGTGTAC +
Preference number: 3 (lower is better)
Translates to: RLAHQRAMQNSIAFPPRTKMPSN*TRFKVY
Trigger: GTACACTTTAAACCTGGTCAAATTCGAAGGCATTTT...TGTCCTAGGTGGAAAAGCAATTGAATTTTGCATTGCTCGTTGGTGGGCAAGTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000651448.1
ENST00000651748.1
3UTR-3UTR CAA 90 bp TCTTTAAGGCGTTCCAAATCACTGATTTGCTCATGGCGAATCTGTAGTCGAATTCATGTAGAACAAACTTaGCTGACACCTCAGAAGAAC +
Preference number: 3 (lower is better)
Translates to: SLRRSKSLICSWRICSRIHVEQT*LTPQKN
Trigger: GTTCTTCTGAGGTGTCAGCAAAGTTTGTTCTACATG...AATTCGACTACAGATTCGCCATGAGCAAATCAGTGATTTGGAACGCCTTAAAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651448.1
ENST00000651748.1
3UTR-3UTR CAA 90 bp AGATTCAGCTGTCTGGCACTTACACATGTATTCATAGAGTTCATTCTGATGCTCTGGGATCAGTCTTCATaGCAATATAAACTGCTAGGG +
Preference number: 3 (lower is better)
Translates to: RFSCLALTHVFIEFILMLWDQSS*QYKLLG
Trigger: CCCTAGCAGTTTATATTGCAATGAAGACTGATCCCA...GAGCATCAGAATGAACTCTATGAATACATGTGTAAGTGCCAGACAGCTGAATCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651448.1
ENST00000651748.1
3UTR-3UTR CAA 90 bp AGACAATCTATGAGAAACAATAAATGGAAGGTCTTTAAGGCGTTCCAAATCACTCTTGATGGAAAGAATTaGAGCACCAGGAGCTACCCC +
Preference number: 3 (lower is better)
Translates to: RQSMRNNKWKVFKAFQITLDGKN*STRSYP
Trigger: GGGGTAGCTCCTGGTGCTCAAATTCTTTCCATCAAG...AGTGATTTGGAACGCCTTAAAGACCTTCCATTTATTGTTTCTCATAGATTGTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651448.1
3UTR-3UTR CAA 90 bp TTGGTGGAGGTATTAAGTAGTAATGAACAGGGATTACATCAGCTTTCTTTCCTAATGCCTCCACATGCATaGGGGGAAGACATAGATGTT +
Preference number: 3 (lower is better)
Translates to: LVEVLSSNEQGLHQLSFLMPPHA*GEDIDV
Trigger: AACATCTATGTCTTCCCCCAATGCATGTGGAGGCAT...TAGGAAAGAAAGCTGATGTAATCCCTGTTCATTACTACTTAATACCTCCACCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651448.1
3UTR-3UTR CAA 90 bp TTTTCATTCGTTCCTTTTCAGCATCCAATTGATGAAGTCGTGCAACGTACAGAGGCAAATACTTCTATATaGTCAGCCTTCACTGCAGTG +
Preference number: 3 (lower is better)
Translates to: FSFVPFQHPIDEVVQRTEANTSI*SAFTAV
Trigger: CACTGCAGTGAAGGCTGACAATATAGAAGTATTTGC...CTCTGTACGTTGCACGACTTCATCAATTGGATGCTGAAAAGGAACGAATGAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651448.1
3UTR-3UTR CAA 90 bp AGATTTATTGAAGCAGTTATGCTCCAGCAACTGCCACTCATTTGTGCTGGTTCTATTAATTTCCAACAGTaGATCAGCCGTATAACCTTG +
Preference number: 3 (lower is better)
Translates to: RFIEAVMLQQLPLICAGSINFQQ*ISRITL
Trigger: CAAGGTTATACGGCTGATCAACTGTTGGAAATTAAT...AGAACCAGCACAAATGAGTGGCAGTTGCTGGAGCATAACTGCTTCAATAAATCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376052.5
3UTR-3UTR CAA 90 bp TCTATGAGAAACAATAAATGGAAGGTCTTTAAGGCGTTCCAAATCACTGATTTGCTAAAGGTTTTGTTTTaGCACTCACTGGGCGCAGTG +
Preference number: 3 (lower is better)
Translates to: SMRNNKWKVFKAFQITDLLKVLF*HSLGAV
Trigger: CACTGCGCCCAGTGAGTGCAAAAACAAAACCTTTAG...CAAATCAGTGATTTGGAACGCCTTAAAGACCTTCCATTTATTGTTTCTCATAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651748.1
3UTR TCA 72 bp GGATGTGAAAATGACTTGCCTGTAATTACCCCAAGATaGAGATTTATTGAAGCAGTTATGCTCCAGCAACTG +
Preference number: 3 (lower is better)
Translates to: GCENDLPVITPR*RFIEAVMLQQL
Trigger: CAGTTGCTGGAGCATAACTGCTTCAATAAATCTTCATCTTGGGGTAATTACAGGCAAGTCATTTTCACATCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376052.5
ENST00000651448.1
ENST00000651544.1
ENST00000651748.1
3UTR CCA 72 bp AGCAGTTATGCTCCAGCAACTGCCACTCATTTGTGCTaGTTCTACTTTTTCCCCTTAATTGAATGTAAACAT +
Preference number: 3 (lower is better)
Translates to: SSYAPATATHLC*FYFFPLIECKH
Trigger: ATGTTTACATTCAATTAAGGGGAAAAAGTAGAACCAGCACAAATGAGTGGCAGTTGCTGGAGCATAACTGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376052.5
ENST00000651448.1
ENST00000651544.1
ENST00000651748.1
3UTR CCA 72 bp ATACCTCTGTATAATGCAATCCTTCTCTTAAGCCCCTaGGATCCACACGTATGTTTATGTGTCTACATTGAT +
Preference number: 3 (lower is better)
Translates to: IPLYNAILLLSP*DPHVCLCVYID
Trigger: ATCAATGTAGACACATAAACATACGTGTGGATCCCAGGGGCTTAAGAGAAGGATTGCATTATACAGAGGTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651448.1
3UTR-3UTR CAA 90 bp TTAAGAAAACACCATGATGTCAGAGGTCTAGATTTACATGTATTAAGCCACACGCTTTTCAGCATCCAATaGATGAAGTCGTGCAACGTA +
Preference number: 3 (lower is better)
Translates to: LRKHHDVRGLDLHVLSHTLFSIQ*MKSCNV
Trigger: TACGTTGCACGACTTCATCAATTGGATGCTGAAAAG...CGTGTGGCTTAATACATGTAAATCTAGACCTCTGACATCATGGTGTTTTCTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000651448.1
ENST00000651748.1
3UTR TCA 72 bp CTTACACATGTATTCATAGAGTTCATTCTGATGCTCTaGACCTCAAGAGGATGTGAAAATGACTTGCCTGTA +
Preference number: 3 (lower is better)
Translates to: LTHVFIEFILML*TSRGCENDLPV
Trigger: TACAGGCAAGTCATTTTCACATCCTCTTGAGGTTCAGAGCATCAGAATGAACTCTATGAATACATGTGTAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376052.5
ENST00000651448.1
ENST00000651544.1
ENST00000651748.1
3UTR GCA 72 bp CATTCGTTCCTTTTCAGCATCCAATTGATGAAGTCGTaGAACGTACAGAGGAAGATAATTAGGATATGTTTC +
Preference number: 3 (lower is better)
Translates to: HSFLFSIQLMKS*NVQRKIIRICF
Trigger: GAAACATATCCTAATTATCTTCCTCTGTACGTTGCACGACTTCATCAATTGGATGCTGAAAAGGAACGAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000651448.1
ENST00000651748.1
ENST00000651921.1
3UTR-3UTR CAA 90 bp TTGGTGGAGGTATTAAGTAGTAATGAACAGGGATTACATCAGCTTTCTTTCCTACAATGCAAAATTCAATaGCTTTTCCACCTAGGACAG +
Preference number: 3 (lower is better)
Translates to: LVEVLSSNEQGLHQLSFLQCKIQ*LFHLGQ
Trigger: CTGTCCTAGGTGGAAAAGCAATTGAATTTTGCATTG...TAGGAAAGAAAGCTGATGTAATCCCTGTTCATTACTACTTAATACCTCCACCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000651448.1
ENST00000651748.1
3UTR-3UTR CAA 90 bp GGCTGTTTGATCTATATGAGAAATAACAGCATTTGCCGCATCAACAATTTCATTTTGATCCTAAAGGTTTaGTTTTTGCACTCACTGGGC +
Preference number: 3 (lower is better)
Translates to: GCLIYMRNNSICRINNFILILKV*FLHSLG
Trigger: GCCCAGTGAGTGCAAAAACAAAACCTTTAGGATCAA...AATGAAATTGTTGATGCGGCAAATGCTGTTATTTCTCATATAGATCAAACAGCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000651448.1
ENST00000651748.1
3UTR-3UTR CAA 90 bp CATATCATATGTGTATCTTTACAATACCTGATAAAGATTCAGCTGTCTGGCACTTTCCCCACTCTTGGGTaGATGAAAGTTATATGTCAG +
Preference number: 3 (lower is better)
Translates to: HIICVSLQYLIKIQLSGTFPTLG*MKVICQ
Trigger: CTGACATATAACTTTCATCAACCCAAGAGTGGGGAA...AGTGCCAGACAGCTGAATCTTTATCAGGTATTGTAAAGATACACATATGATATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000651448.1
ENST00000651748.1
3UTR GCA 72 bp AGAAATGGTATAATCAATGTTGACATCACTGAGACTTaGCCACCAACGAGCAATGCAAAATTCAATTGCTTT +
Preference number: 3 (lower is better)
Translates to: RNGIINVDITET*PPTSNAKFNCF
Trigger: AAAGCAATTGAATTTTGCATTGCTCGTTGGTGGGCAAGTCTCAGTGATGTCAACATTGATTATACCATTTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000651448.1
ENST00000651748.1
3UTR-3UTR CAA 90 bp GGTATTAGACAATCTATGAGAAACAATAAATGGAAGGTCTTTAAGGCGTTCCAACAAGATGAAGATTTATaGAAGCAGTTATGCTCCAGC +
Preference number: 3 (lower is better)
Translates to: GIRQSMRNNKWKVFKAFQQDEDL*KQLCSS
Trigger: GCTGGAGCATAACTGCTTCAATAAATCTTCATCTTG...TTGGAACGCCTTAAAGACCTTCCATTTATTGTTTCTCATAGATTGTCTAATACC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651448.1
ENST00000651748.1
3UTR-3UTR CAA 90 bp TTAAGAAAACACCATGATGTCAGAGGTCTAGATTTACATGTATTAAGCCACACGATACATACACACAATTaGCCATTAGATAAGGGACTG +
Preference number: 3 (lower is better)
Translates to: LRKHHDVRGLDLHVLSHTIHTHN*PLDKGL
Trigger: CAGTCCCTTATCTAATGGCAAATTGTGTGTATGTAT...CGTGTGGCTTAATACATGTAAATCTAGACCTCTGACATCATGGTGTTTTCTTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376052.5
3UTR-3UTR CAA 90 bp TGTATCTTTACAATACCTGATAAAGATTCAGCTGTCTGGCACTTACACATGTATCAATGCAAAATTCAATaGCTTTTCCACCTAGGACAG +
Preference number: 3 (lower is better)
Translates to: CIFTIPDKDSAVWHLHMYQCKIQ*LFHLGQ
Trigger: CTGTCCTAGGTGGAAAAGCAATTGAATTTTGCATTG...ATACATGTGTAAGTGCCAGACAGCTGAATCTTTATCAGGTATTGTAAAGATACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000651448.1
ENST00000651748.1
3UTR-3UTR CAA 90 bp GGCTGTTTGATCTATATGAGAAATAACAGCATTTGCCGCATCAACAATTTCATTGACCATCTCATAAAGTaGACGGTTATTTGGCAAAAC +
Preference number: 3 (lower is better)
Translates to: GCLIYMRNNSICRINNFIDHLIK*TVIWQN
Trigger: GTTTTGCCAAATAACCGTCAACTTTATGAGATGGTC...AATGAAATTGTTGATGCGGCAAATGCTGTTATTTCTCATATAGATCAAACAGCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000651448.1
ENST00000651748.1
3UTR-3UTR CAA 90 bp TTAAGAAAACACCATGATGTCAGAGGTCTAGATTTACATGTATTAAGCCACACGGAACCCATCTGTCTTTaGTTCTGGTCAAAAATAATC +
Preference number: 3 (lower is better)
Translates to: LRKHHDVRGLDLHVLSHTEPICL*FWSKII
Trigger: GATTATTTTTGACCAGAACAAAAGACAGATGGGTTC...CGTGTGGCTTAATACATGTAAATCTAGACCTCTGACATCATGGTGTTTTCTTAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000651448.1
ENST00000651748.1
3UTR-3UTR CAA 90 bp AGGTCTAGATTTACATGTATTAAGCCACACGTCAGTGAATTCTCTGATAAATACAAAATGCCTTCGAATTaGACCAGGTTTAAAGTGTAC +
Preference number: 3 (lower is better)
Translates to: RSRFTCIKPHVSEFSDKYKMPSN*TRFKVY
Trigger: GTACACTTTAAACCTGGTCAAATTCGAAGGCATTTT...GTATTTATCAGAGAATTCACTGACGTGTGGCTTAATACATGTAAATCTAGACCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000651448.1
ENST00000651748.1
3UTR-3UTR CAA 90 bp AATGAACAGGGATTACATCAGCTTTCTTTCCTAGTTCAGTCTTTGACAATGTTAAAAGTTGACGGTTATTaGGCAAAACATCTCTTGATC +
Preference number: 3 (lower is better)
Translates to: NEQGLHQLSFLVQSLTMLKVDGY*AKHLLI
Trigger: GATCAAGAGATGTTTTGCCAAATAACCGTCAACTTT...TAACATTGTCAAAGACTGAACTAGGAAAGAAAGCTGATGTAATCCCTGTTCATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000651448.1
ENST00000651748.1
3UTR-3UTR CAA 90 bp TTATTGTCAAAGAGATCAGTCCATTTAGTAGTTTCCCAAAATGTTTCTGCCAGAAAAGTTGACGGTTATTaGGCAAAACATCTCTTGATC +
Preference number: 3 (lower is better)
Translates to: LLSKRSVHLVVSQNVSARKVDGY*AKHLLI
Trigger: GATCAAGAGATGTTTTGCCAAATAACCGTCAACTTT...TCTGGCAGAAACATTTTGGGAAACTACTAAATGGACTGATCTCTTTGACAATAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000651448.1
ENST00000651748.1
CDS-3UTR TCA 90 bp GCAACCCAACTCGAAGTCCTAGGTGCTGGCAGGCAGGGCACATCCCCGTGCCAGCTCCTCCTGGCGCACTaGTACTCACACCAAGGGCCC +
Preference number: 4 (lower is better)
Translates to: ATQLEVLGAGRQGTSPCQLLLAH*YSHQGP
Trigger: GGGCCCTTGGTGTGAGTATCAGTGCGCCAGGAGGAG...CTGGCACGGGGATGTGCCCTGCCTGCCAGCACCTAGGACTTCGAGTTGGGTTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376052.5
ENST00000651448.1
ENST00000651544.1
CDS-3UTR CCA 90 bp GCTCACCAGATGGCAGGGGCCACACTCAGCCCTCCTCCTGGCCGAGGGAATGTTCTGCTGCTCACCAGATaGCAGGGGCCACACTCAGCC +
Preference number: 4 (lower is better)
Translates to: AHQMAGATLSPPPGRGNVLLLTR*QGPHSA
Trigger: GGCTGAGTGTGGCCCCTGCCATCTGGTGAGCAGCAG...AACATTCCCTCGGCCAGGAGGAGGGCTGAGTGTGGCCCCTGCCATCTGGTGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651448.1
CDS-3UTR TCA 90 bp ACCCAACTCGAAGTCCTAGGTGCTGGCAGGCAGGGCACATCCCCGTGCCAGCAACTCCTCCTGGCGCACTaGTACTCACACCAAGGGCCC +
Preference number: 4 (lower is better)
Translates to: TQLEVLGAGRQGTSPCQQLLLAH*YSHQGP
Trigger: GGGCCCTTGGTGTGAGTATCAGTGCGCCAGGAGGAG...TTGCTGGCACGGGGATGTGCCCTGCCTGCCAGCACCTAGGACTTCGAGTTGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376052.5
ENST00000651448.1
ENST00000651544.1
CDS-3UTR CCA 90 bp CCAACTCGAAGTCCTAGGTGCTGGCAGGCAGGGCACATCCCCGTGCCAGCAATGCGAAGTCCTAGGTGCTaGCAGGCAGGGCACATCCCC +
Preference number: 4 (lower is better)
Translates to: PTRSPRCWQAGHIPVPAMRSPRC*QAGHIP
Trigger: GGGGATGTGCCCTGCCTGCCAGCACCTAGGACTTCG...CATTGCTGGCACGGGGATGTGCCCTGCCTGCCAGCACCTAGGACTTCGAGTTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376052.5
ENST00000651448.1
ENST00000651544.1
ENST00000651748.1
CDS-3UTR CCA 90 bp CTCGGCCAGAGTCTGCAGGGCAGACTCGGCAAATGCTGCCTGATGGATCCTGGCCTGCCTGATGGATCCTaGCTGCCCAGAGAAGGGCTG +
Preference number: 4 (lower is better)
Translates to: LGQSLQGRLGKCCLMDPGLPDGS*LPREGL
Trigger: CAGCCCTTCTCTGGGCAGCCAGGATCCATCAGGCAG...GCCAGGATCCATCAGGCAGCATTTGCCGAGTCTGCCCTGCAGACTCTGGCCGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651921.1
CDS-3UTR TCA 90 bp GCTCACCAGATGGCAGGGGCCACACTCAGCCCTCCTCCTGGCCGAGGGAATGTTAGTGAAGCTAGAAGCTaGTACTGGGGCTGCCTTGCA +
Preference number: 4 (lower is better)
Translates to: AHQMAGATLSPPPGRGNVSEARS*YWGCLA
Trigger: TGCAAGGCAGCCCCAGTATCAGCTTCTAGCTTCACT...AACATTCCCTCGGCCAGGAGGAGGGCTGAGTGTGGCCCCTGCCATCTGGTGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651448.1
CDS-3UTR GCA 90 bp CCAACTCGAAGTCCTAGGTGCTGGCAGGCAGGGCACATCCCCGTGCCAGCAATGCAGGGCACATCCCCGTaGCAGCAATGTGAGGCATTA +
Preference number: 4 (lower is better)
Translates to: PTRSPRCWQAGHIPVPAMQGTSP*QQCEAL
Trigger: TAATGCCTCACATTGCTGGCACGGGGATGTGCCCTG...CATTGCTGGCACGGGGATGTGCCCTGCCTGCCAGCACCTAGGACTTCGAGTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376052.5
ENST00000651448.1
ENST00000651544.1
ENST00000651748.1
CDS-3UTR TCA 90 bp CCAGACCCCTGCTGCTCACCAGATGGCAGGGGCCACACTCAGCCCTCCTCCTGGGAACATCAAAGCGGTTaGTTCCTTCCGATGCATGAA +
Preference number: 4 (lower is better)
Translates to: PDPCCSPDGRGHTQPSSWEHQSG*FLPMHE
Trigger: TTCATGCATCGGAAGGAATCAACCGCTTTGATGTTC...CCAGGAGGAGGGCTGAGTGTGGCCCCTGCCATCTGGTGAGCAGCAGGGGTCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651448.1
CDS-3UTR TCA 90 bp GCAACCCAACTCGAAGTCCTAGGTGCTGGCAGGCAGGGCACATCCCCGTGCCAGCCCGTGCCAGCAATGTaGGGCATTAAGAAAACACCA +
Preference number: 4 (lower is better)
Translates to: ATQLEVLGAGRQGTSPCQPVPAM*GIKKTP
Trigger: TGGTGTTTTCTTAATGCCTCACATTGCTGGCACGGG...CTGGCACGGGGATGTGCCCTGCCTGCCAGCACCTAGGACTTCGAGTTGGGTTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376052.5
ENST00000651448.1
ENST00000651544.1
ENST00000651748.1
CDS-3UTR TCA 90 bp GCAACCCAACTCGAAGTCCTAGGTGCTGGCAGGCAGGGCACATCCCCGTGCCAGCTTAAGCACTCTTCCTaGAAGGCCAACAATCTCACC +
Preference number: 4 (lower is better)
Translates to: ATQLEVLGAGRQGTSPCQLKHSS*KANNLT
Trigger: GGTGAGATTGTTGGCCTTTCAGGAAGAGTGCTTAAG...CTGGCACGGGGATGTGCCCTGCCTGCCAGCACCTAGGACTTCGAGTTGGGTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376052.5
ENST00000651448.1
ENST00000651544.1
CDS-3UTR TCA 90 bp CTAGGTGCTGGCAGGCAGGGCACATCCCCGTGCCAGCAATGTGAGGCATTAAGATCAATGCCAACGCCATaGTCTGAAGGTGCAGCCACC +
Preference number: 4 (lower is better)
Translates to: LGAGRQGTSPCQQCEALRSMPTP*SEGAAT
Trigger: GGTGGCTGCACCTTCAGATCATGGCGTTGGCATTGA...TCTTAATGCCTCACATTGCTGGCACGGGGATGTGCCCTGCCTGCCAGCACCTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376052.5
ENST00000651448.1
ENST00000651544.1
CDS-3UTR TCA 90 bp CTAGGTGCTGGCAGGCAGGGCACATCCCCGTGCCAGCAATGTGAGGCATTAAGACACTGCACTCCAGCTTaGGAAGAGCCGTTGTTGGCA +
Preference number: 4 (lower is better)
Translates to: LGAGRQGTSPCQQCEALRHCTPA*EEPLLA
Trigger: TGCCAACAACGGCTCTTCTCAAGCTGGAGTGCAGTG...TCTTAATGCCTCACATTGCTGGCACGGGGATGTGCCCTGCCTGCCAGCACCTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651448.1
CDS-3UTR GCA 90 bp ACCCAACTCGAAGTCCTAGGTGCTGGCAGGCAGGGCACATCCCCGTGCCAGCAATCTGAAGAGCGGACCTaGGTTAGGGGATGCTATATC +
Preference number: 4 (lower is better)
Translates to: TQLEVLGAGRQGTSPCQQSEERT*VRGCYI
Trigger: GATATAGCATCCCCTAACGCAGGTCCGCTCTTCAGA...TTGCTGGCACGGGGATGTGCCCTGCCTGCCAGCACCTAGGACTTCGAGTTGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376052.5
ENST00000651448.1
ENST00000651544.1
CDS-3UTR GCA 90 bp ACCCAACTCGAAGTCCTAGGTGCTGGCAGGCAGGGCACATCCCCGTGCCAGCAAGACATCACTGAGACTTaGCCACCAACGAGCAATGCA +
Preference number: 4 (lower is better)
Translates to: TQLEVLGAGRQGTSPCQQDITET*PPTSNA
Trigger: TGCATTGCTCGTTGGTGGGCAAGTCTCAGTGATGTC...TTGCTGGCACGGGGATGTGCCCTGCCTGCCAGCACCTAGGACTTCGAGTTGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376052.5
ENST00000651448.1
ENST00000651544.1
ENST00000651748.1
CDS-3UTR CCA 90 bp CTAGGTGCTGGCAGGCAGGGCACATCCCCGTGCCAGCAATGTGAGGCATTAAGAAGCAATGGCTCCTCCTaGCGCACTGATACTCACACC +
Preference number: 4 (lower is better)
Translates to: LGAGRQGTSPCQQCEALRSNGSS*RTDTHT
Trigger: GGTGTGAGTATCAGTGCGCCAGGAGGAGCCATTGCT...TCTTAATGCCTCACATTGCTGGCACGGGGATGTGCCCTGCCTGCCAGCACCTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376052.5
ENST00000651448.1
ENST00000651544.1
CDS-3UTR CCA 90 bp ACCCAACTCGAAGTCCTAGGTGCTGGCAGGCAGGGCACATCCCCGTGCCAGCAAACTTTGCTGGTCAGGTaGGACAGTGAAGCTAGAAGC +
Preference number: 4 (lower is better)
Translates to: TQLEVLGAGRQGTSPCQQTLLVR*DSEARS
Trigger: GCTTCTAGCTTCACTGTCCCACCTGACCAGCAAAGT...TTGCTGGCACGGGGATGTGCCCTGCCTGCCAGCACCTAGGACTTCGAGTTGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651448.1
CDS-3UTR TCA 90 bp ACCCAACTCGAAGTCCTAGGTGCTGGCAGGCAGGGCACATCCCCGTGCCAGCAATGGATAGGCATCGCCTaGACCCATCTGTCTTTTGTT +
Preference number: 4 (lower is better)
Translates to: TQLEVLGAGRQGTSPCQQWIGIA*THLSFV
Trigger: AACAAAAGACAGATGGGTTCAGGCGATGCCTATCCA...TTGCTGGCACGGGGATGTGCCCTGCCTGCCAGCACCTAGGACTTCGAGTTGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376052.5
ENST00000651448.1
ENST00000651544.1
ENST00000651748.1
CDS-3UTR GCA 90 bp GCAACCCAACTCGAAGTCCTAGGTGCTGGCAGGCAGGGCACATCCCCGTGCCAGCTTCGATATGCTCTTTaGTTCACAAGCTGGACTGCA +
Preference number: 4 (lower is better)
Translates to: ATQLEVLGAGRQGTSPCQLRYAL*FTSWTA
Trigger: TGCAGTCCAGCTTGTGAAGCAAAGAGCATATCGAAG...CTGGCACGGGGATGTGCCCTGCCTGCCAGCACCTAGGACTTCGAGTTGGGTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376052.5
ENST00000651448.1
ENST00000651544.1
ENST00000651748.1
CDS-3UTR GCA 90 bp ACCCAACTCGAAGTCCTAGGTGCTGGCAGGCAGGGCACATCCCCGTGCCAGCAATCCTTGTCGTTTTGCTaGAGACTGCCCAGCTTTCTT +
Preference number: 4 (lower is better)
Translates to: TQLEVLGAGRQGTSPCQQSLSFC*RLPSFL
Trigger: AAGAAAGCTGGGCAGTCTGCAGCAAAACGACAAGGA...TTGCTGGCACGGGGATGTGCCCTGCCTGCCAGCACCTAGGACTTCGAGTTGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376052.5
CDS-3UTR GCA 90 bp GCTCACCAGATGGCAGGGGCCACACTCAGCCCTCCTCCTGGCCGAGGGAATGTTACTGCCACTCATTTGTaGTGGTTCTACTTTTTCCCC +
Preference number: 4 (lower is better)
Translates to: AHQMAGATLSPPPGRGNVTATHL*WFYFFP
Trigger: GGGGAAAAAGTAGAACCAGCACAAATGAGTGGCAGT...AACATTCCCTCGGCCAGGAGGAGGGCTGAGTGTGGCCCCTGCCATCTGGTGAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651448.1
CDS-3UTR CCA 90 bp CCTATCATGCATGTCATAAGCTGCAACCCAACTCGAAGTCCTAGGTGCTGGCAGCCTCAGTCGCAGCGGTaGCCATGGACGCAGGATGGA +
Preference number: 4 (lower is better)
Translates to: PIMHVISCNPTRSPRCWQPQSQR*PWTQDG
Trigger: TCCATCCTGCGTCCATGGCCACCGCTGCGACTGAGG...CTGCCAGCACCTAGGACTTCGAGTTGGGTTGCAGCTTATGACATGCATGATAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376052.5
ENST00000651448.1
CDS-3UTR CCA 90 bp CTAGGTGCTGGCAGGCAGGGCACATCCCCGTGCCAGCAATGTGAGGCATTAAGACATGAGCTCCTCCACTaGTCACAATGGAGAGCAGGT +
Preference number: 4 (lower is better)
Translates to: LGAGRQGTSPCQQCEALRHELLH*SQWRAG
Trigger: ACCTGCTCTCCATTGTGACCAGTGGAGGAGCTCATG...TCTTAATGCCTCACATTGCTGGCACGGGGATGTGCCCTGCCTGCCAGCACCTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376052.5
ENST00000651448.1
ENST00000651544.1
CDS-3UTR TCA 90 bp ACCCAACTCGAAGTCCTAGGTGCTGGCAGGCAGGGCACATCCCCGTGCCAGCAAGAACATCAAAGCGGTTaGTTCCTTCCGATGCATGAA +
Preference number: 4 (lower is better)
Translates to: TQLEVLGAGRQGTSPCQQEHQSG*FLPMHE
Trigger: TTCATGCATCGGAAGGAATCAACCGCTTTGATGTTC...TTGCTGGCACGGGGATGTGCCCTGCCTGCCAGCACCTAGGACTTCGAGTTGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376052.5
ENST00000651448.1
ENST00000651748.1
CDS-3UTR TCA 90 bp CAACTCGAAGTCCTAGGTGCTGGCAGGCAGGGCACATCCCCGTGCCAGCAATGTGGCGTTCCAAATCACTaGTTTGCTCATGGCGAATCT +
Preference number: 4 (lower is better)
Translates to: QLEVLGAGRQGTSPCQQCGVPNH*FAHGES
Trigger: AGATTCGCCATGAGCAAATCAGTGATTTGGAACGCC...ACATTGCTGGCACGGGGATGTGCCCTGCCTGCCAGCACCTAGGACTTCGAGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376052.5
ENST00000651448.1
ENST00000651544.1
ENST00000651748.1
CDS-3UTR TCA 90 bp GCAACCCAACTCGAAGTCCTAGGTGCTGGCAGGCAGGGCACATCCCCGTGCCAGCGCTCTAACACTTCATaGGATACAGCAGAAACAGTT +
Preference number: 4 (lower is better)
Translates to: ATQLEVLGAGRQGTSPCQRSNTS*DTAETV
Trigger: AACTGTTTCTGCTGTATCTCATGAAGTGTTAGAGCG...CTGGCACGGGGATGTGCCCTGCCTGCCAGCACCTAGGACTTCGAGTTGGGTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376052.5
CDS-3UTR GCA 90 bp CCAACTCGAAGTCCTAGGTGCTGGCAGGCAGGGCACATCCCCGTGCCAGCAATGCTTCGATATGCTCTTTaGTTCACAAGCTGGACTGCA +
Preference number: 4 (lower is better)
Translates to: PTRSPRCWQAGHIPVPAMLRYAL*FTSWTA
Trigger: TGCAGTCCAGCTTGTGAAGCAAAGAGCATATCGAAG...CATTGCTGGCACGGGGATGTGCCCTGCCTGCCAGCACCTAGGACTTCGAGTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376052.5
ENST00000651448.1
ENST00000651544.1
ENST00000651748.1
CDS-3UTR GCA 90 bp CCAACTCGAAGTCCTAGGTGCTGGCAGGCAGGGCACATCCCCGTGCCAGCAATGACTGCCACTCATTTGTaGTGGTTCTACTTTTTCCCC +
Preference number: 4 (lower is better)
Translates to: PTRSPRCWQAGHIPVPAMTATHL*WFYFFP
Trigger: GGGGAAAAAGTAGAACCAGCACAAATGAGTGGCAGT...CATTGCTGGCACGGGGATGTGCCCTGCCTGCCAGCACCTAGGACTTCGAGTTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376052.5
ENST00000651448.1
ENST00000651544.1
ENST00000651748.1
CDS-3UTR GCA 90 bp ACCCAACTCGAAGTCCTAGGTGCTGGCAGGCAGGGCACATCCCCGTGCCAGCAAACTGCCACTCATTTGTaGTGGTTCTACTTTTTCCCC +
Preference number: 4 (lower is better)
Translates to: TQLEVLGAGRQGTSPCQQTATHL*WFYFFP
Trigger: GGGGAAAAAGTAGAACCAGCACAAATGAGTGGCAGT...TTGCTGGCACGGGGATGTGCCCTGCCTGCCAGCACCTAGGACTTCGAGTTGGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376052.5
ENST00000651448.1
ENST00000651544.1
ENST00000651748.1
CDS-3UTR CCA 90 bp GCAACCCAACTCGAAGTCCTAGGTGCTGGCAGGCAGGGCACATCCCCGTGCCAGAACTGTAGACAGGCATaGACCATTATTTCCAGCACT +
Preference number: 4 (lower is better)
Translates to: ATQLEVLGAGRQGTSPCQNCRQA*TIISST
Trigger: AGTGCTGGAAATAATGGTCCATGCCTGTCTACAGTT...CTGGCACGGGGATGTGCCCTGCCTGCCAGCACCTAGGACTTCGAGTTGGGTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376052.5
ENST00000651448.1
ENST00000651544.1
CDS-3UTR CCA 90 bp GCAACCCAACTCGAAGTCCTAGGTGCTGGCAGGCAGGGCACATCCCCGTGCCAGCTTTGCTTCACAAGCTaGACTGCATGTAGAACAAAC +
Preference number: 4 (lower is better)
Translates to: ATQLEVLGAGRQGTSPCQLCFTS*TACRTN
Trigger: GTTTGTTCTACATGCAGTCCAGCTTGTGAAGCAAAG...CTGGCACGGGGATGTGCCCTGCCTGCCAGCACCTAGGACTTCGAGTTGGGTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376052.5
ENST00000651448.1
ENST00000651544.1
ENST00000651748.1
CDS-3UTR CCA 90 bp CCAACTCGAAGTCCTAGGTGCTGGCAGGCAGGGCACATCCCCGTGCCAGCAATGGGGCATCTACGAGGGTaGATTTTTGTTTGTCCATGT +
Preference number: 4 (lower is better)
Translates to: PTRSPRCWQAGHIPVPAMGHLRG*IFVCPC
Trigger: ACATGGACAAACAAAAATCCACCCTCGTAGATGCCC...CATTGCTGGCACGGGGATGTGCCCTGCCTGCCAGCACCTAGGACTTCGAGTTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000376052.5
ENST00000651448.1
ENST00000651544.1
ENST00000651748.1
CDS-3UTR TCA 90 bp CTAGGTGCTGGCAGGCAGGGCACATCCCCGTGCCAGCAATGTGAGGCATTAAGATTGATGGAAAGAATTTaGGCACCAGGAGCTACCCCA +
Preference number: 4 (lower is better)
Translates to: LGAGRQGTSPCQQCEALRLMERI*APGATP
Trigger: TGGGGTAGCTCCTGGTGCTCAAATTCTTTCCATCAA...TCTTAATGCCTCACATTGCTGGCACGGGGATGTGCCCTGCCTGCCAGCACCTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376052.5
ENST00000651448.1
ENST00000651544.1
CDS-3UTR TCA 90 bp CTAGGTGCTGGCAGGCAGGGCACATCCCCGTGCCAGCAATGTGAGGCATTAAGAATTAGCTTTCAGACCTaGAAGGATCAGGGCAATGCC +
Preference number: 4 (lower is better)
Translates to: LGAGRQGTSPCQQCEALRISFQT*KDQGNA
Trigger: GGCATTGCCCTGATCCTTTCAGGTCTGAAAGCTAAT...TCTTAATGCCTCACATTGCTGGCACGGGGATGTGCCCTGCCTGCCAGCACCTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376052.5
ENST00000651448.1
ENST00000651544.1
CDS-3UTR TCA 90 bp CCTATCATGCATGTCATAAGCTGCAACCCAACTCGAAGTCCTAGGTGCTGGCAGGCCAACGCCATGATCTaGAGGTGCAGCCACCTGAAC +
Preference number: 4 (lower is better)
Translates to: PIMHVISCNPTRSPRCWQANAMI*RCSHLN
Trigger: GTTCAGGTGGCTGCACCTTCAGATCATGGCGTTGGC...CTGCCAGCACCTAGGACTTCGAGTTGGGTTGCAGCTTATGACATGCATGATAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376052.5
ENST00000651448.1
ENST00000651544.1
CDS-3UTR TCA 90 bp ACCCAACTCGAAGTCCTAGGTGCTGGCAGGCAGGGCACATCCCCGTGCCAGCAAAAATGGCTGGGACACTaGACCCAAGATGAATTTGAA +
Preference number: 4 (lower is better)
Translates to: TQLEVLGAGRQGTSPCQQKWLGH*TQDEFE
Trigger: TTCAAATTCATCTTGGGTTCAGTGTCCCAGCCATTT...TTGCTGGCACGGGGATGTGCCCTGCCTGCCAGCACCTAGGACTTCGAGTTGGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376052.5
ENST00000651448.1
ENST00000651544.1
CDS-3UTR GCA 90 bp ACCCAACTCGAAGTCCTAGGTGCTGGCAGGCAGGGCACATCCCCGTGCCAGCAAATTTGGCCAGTGAGTTaGTTCTCCGTAACTGTAGTT +
Preference number: 4 (lower is better)
Translates to: TQLEVLGAGRQGTSPCQQIWPVS*FSVTVV
Trigger: AACTACAGTTACGGAGAAGCAACTCACTGGCCAAAT...TTGCTGGCACGGGGATGTGCCCTGCCTGCCAGCACCTAGGACTTCGAGTTGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376052.5
ENST00000651448.1
ENST00000651544.1
CDS-3UTR GCA 90 bp CAACTCGAAGTCCTAGGTGCTGGCAGGCAGGGCACATCCCCGTGCCAGCAATGTACCTGCGTTAGGGGATaGTATATCATAGCCACATAC +
Preference number: 4 (lower is better)
Translates to: QLEVLGAGRQGTSPCQQCTCVRG*YIIATY
Trigger: GTATGTGGCTATGATATAGCATCCCCTAACGCAGGT...ACATTGCTGGCACGGGGATGTGCCCTGCCTGCCAGCACCTAGGACTTCGAGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376052.5
ENST00000651448.1
ENST00000651544.1
CDS-3UTR GCA 90 bp GCAACCCAACTCGAAGTCCTAGGTGCTGGCAGGCAGGGCACATCCCCGTGCCAGTTTTGCTGCTATAACTaGAGTGATCGGAACTCTGAA +
Preference number: 4 (lower is better)
Translates to: ATQLEVLGAGRQGTSPCQFCCYN*SDRNSE
Trigger: TTCAGAGTTCCGATCACTGCAGTTATAGCAGCAAAA...CTGGCACGGGGATGTGCCCTGCCTGCCAGCACCTAGGACTTCGAGTTGGGTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376052.5
ENST00000651448.1
ENST00000651544.1
CDS-3UTR GCA 90 bp CAACTCGAAGTCCTAGGTGCTGGCAGGCAGGGCACATCCCCGTGCCAGCAATGTCTTCGATATGCTCTTTaGTTCACAAGCTGGACTGCA +
Preference number: 4 (lower is better)
Translates to: QLEVLGAGRQGTSPCQQCLRYAL*FTSWTA
Trigger: TGCAGTCCAGCTTGTGAAGCAAAGAGCATATCGAAG...ACATTGCTGGCACGGGGATGTGCCCTGCCTGCCAGCACCTAGGACTTCGAGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376052.5
ENST00000651448.1
ENST00000651544.1
ENST00000651748.1
CDS-3UTR GCA 90 bp GCAACCCAACTCGAAGTCCTAGGTGCTGGCAGGCAGGGCACATCCCCGTGCCAGCAATTGATGAAGTCGTaGAACGTACAGAGGAAGATA +
Preference number: 4 (lower is better)
Translates to: ATQLEVLGAGRQGTSPCQQLMKS*NVQRKI
Trigger: TATCTTCCTCTGTACGTTGCACGACTTCATCAATTG...CTGGCACGGGGATGTGCCCTGCCTGCCAGCACCTAGGACTTCGAGTTGGGTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376052.5
ENST00000651448.1
ENST00000651544.1
ENST00000651748.1
CDS-3UTR GCA 90 bp CAACTCGAAGTCCTAGGTGCTGGCAGGCAGGGCACATCCCCGTGCCAGCAATGTATGCATGTCATAAGCTaGAACCCAACTCGAAGTCCT +
Preference number: 4 (lower is better)
Translates to: QLEVLGAGRQGTSPCQQCMHVIS*NPTRSP
Trigger: AGGACTTCGAGTTGGGTTGCAGCTTATGACATGCAT...ACATTGCTGGCACGGGGATGTGCCCTGCCTGCCAGCACCTAGGACTTCGAGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376052.5
ENST00000651448.1
ENST00000651544.1
ENST00000651748.1
CDS-3UTR CCA 90 bp AGACCTGAAAGGATCAGGGCAATGCCTCCACATGCATTGGGGGAAGACATAGATGCCATGGACGCAGGATaGAGGACGAGGAAGCGGCAA +
Preference number: 4 (lower is better)
Translates to: RPERIRAMPPHALGEDIDAMDAG*RTRKRQ
Trigger: TTGCCGCTTCCTCGTCCTCCATCCTGCGTCCATGGC...ATCTATGTCTTCCCCCAATGCATGTGGAGGCATTGCCCTGATCCTTTCAGGTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651448.1
CDS-3UTR CCA 90 bp CTAGGTGCTGGCAGGCAGGGCACATCCCCGTGCCAGCAATGTGAGGCATTAAGACTCCACTGGTCACAATaGAGAGCAGGTTTCCATCAT +
Preference number: 4 (lower is better)
Translates to: LGAGRQGTSPCQQCEALRLHWSQ*RAGFHH
Trigger: ATGATGGAAACCTGCTCTCCATTGTGACCAGTGGAG...TCTTAATGCCTCACATTGCTGGCACGGGGATGTGCCCTGCCTGCCAGCACCTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376052.5
ENST00000651448.1
ENST00000651544.1
CDS-3UTR CCA 90 bp CTAGGTGCTGGCAGGCAGGGCACATCCCCGTGCCAGCAATGTGAGGCATTAAGACCGTTCAGGTTCTTCTaGAAAGTGTCCAGCAGCTAT +
Preference number: 4 (lower is better)
Translates to: LGAGRQGTSPCQQCEALRPFRFF*KVSSSY
Trigger: ATAGCTGCTGGACACTTTCCAGAAGAACCTGAACGG...TCTTAATGCCTCACATTGCTGGCACGGGGATGTGCCCTGCCTGCCAGCACCTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376052.5
ENST00000651448.1
ENST00000651544.1
CDS-3UTR CCA 90 bp CCAACTCGAAGTCCTAGGTGCTGGCAGGCAGGGCACATCCCCGTGCCAGCAATGAACTGTAGACAGGCATaGACCATTATTTCCAGCACT +
Preference number: 4 (lower is better)
Translates to: PTRSPRCWQAGHIPVPAMNCRQA*TIISST
Trigger: AGTGCTGGAAATAATGGTCCATGCCTGTCTACAGTT...CATTGCTGGCACGGGGATGTGCCCTGCCTGCCAGCACCTAGGACTTCGAGTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376052.5
ENST00000651448.1
ENST00000651544.1
CDS-3UTR CCA 90 bp CCAACTCGAAGTCCTAGGTGCTGGCAGGCAGGGCACATCCCCGTGCCAGCAATGCTTTGCTTCACAAGCTaGACTGCATGTAGAACAAAC +
Preference number: 4 (lower is better)
Translates to: PTRSPRCWQAGHIPVPAMLCFTS*TACRTN
Trigger: GTTTGTTCTACATGCAGTCCAGCTTGTGAAGCAAAG...CATTGCTGGCACGGGGATGTGCCCTGCCTGCCAGCACCTAGGACTTCGAGTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376052.5
ENST00000651448.1
ENST00000651544.1
ENST00000651748.1
CDS-3UTR CCA 90 bp GCAACCCAACTCGAAGTCCTAGGTGCTGGCAGGCAGGGCACATCCCCGTGCCAGGGAAGTAACAAAGAATaGCTGGTTATATTTGGGTGG +
Preference number: 4 (lower is better)
Translates to: ATQLEVLGAGRQGTSPCQGSNKE*LVIFGW
Trigger: CCACCCAAATATAACCAGCCATTCTTTGTTACTTCC...CTGGCACGGGGATGTGCCCTGCCTGCCAGCACCTAGGACTTCGAGTTGGGTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376052.5
ENST00000651448.1
ENST00000651544.1
ENST00000651748.1
CDS-3UTR CCA 90 bp CTCTTGATCCTAAAGGTTTTGTTTTTGCACTCACTGGGCGCAGTGTTTGGACCCCGAAGTCCTAGGTGCTaGCAGGCAGGGCACATCCCC +
Preference number: 4 (lower is better)
Translates to: LLILKVLFLHSLGAVFGPRSPRC*QAGHIP
Trigger: GGGGATGTGCCCTGCCTGCCAGCACCTAGGACTTCG...GGGTCCAAACACTGCGCCCAGTGAGTGCAAAAACAAAACCTTTAGGATCAAGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000651748.1
CDS-3UTR TCA 90 bp CTAGGTGCTGGCAGGCAGGGCACATCCCCGTGCCAGCAATGTGAGGCATTAAGAAACACCTATCACACTTaGTGTAGTTCCACCTGGACA +
Preference number: 4 (lower is better)
Translates to: LGAGRQGTSPCQQCEALRNTYHT*CSSTWT
Trigger: TGTCCAGGTGGAACTACATCAAGTGTGATAGGTGTT...TCTTAATGCCTCACATTGCTGGCACGGGGATGTGCCCTGCCTGCCAGCACCTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376052.5
ENST00000651448.1
ENST00000651544.1
CDS-3UTR TCA 90 bp CAACTCGAAGTCCTAGGTGCTGGCAGGCAGGGCACATCCCCGTGCCAGCAATGTAAATGGCTGGGACACTaGACCCAAGATGAATTTGAA +
Preference number: 4 (lower is better)
Translates to: QLEVLGAGRQGTSPCQQCKWLGH*TQDEFE
Trigger: TTCAAATTCATCTTGGGTTCAGTGTCCCAGCCATTT...ACATTGCTGGCACGGGGATGTGCCCTGCCTGCCAGCACCTAGGACTTCGAGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376052.5
ENST00000651448.1
ENST00000651544.1
CDS-3UTR TCA 90 bp GCAACCCAACTCGAAGTCCTAGGTGCTGGCAGGCAGGGCACATCCCCGTGCCAGGCATATGGTGTACTGTaGTCTTGGTTTTGCAAATTT +
Preference number: 4 (lower is better)
Translates to: ATQLEVLGAGRQGTSPCQAYGVL*SWFCKF
Trigger: AAATTTGCAAAACCAAGATCACAGTACACCATATGC...CTGGCACGGGGATGTGCCCTGCCTGCCAGCACCTAGGACTTCGAGTTGGGTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376052.5
ENST00000651544.1
ENST00000651748.1
CDS-3UTR TCA 90 bp CTAGGTGCTGGCAGGCAGGGCACATCCCCGTGCCAGCAATGTGAGGCATTAAGACTAGCCCAGAAGGTGTaGCCAATATGCTTATACATG +
Preference number: 4 (lower is better)
Translates to: LGAGRQGTSPCQQCEALRLAQKV*PICLYM
Trigger: CATGTATAAGCATATTGGTCACACCTTCTGGGCTAG...TCTTAATGCCTCACATTGCTGGCACGGGGATGTGCCCTGCCTGCCAGCACCTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376052.5
CDS-3UTR GCA 90 bp ACCCAACTCGAAGTCCTAGGTGCTGGCAGGCAGGGCACATCCCCGTGCCAGCAATGCCTGTTTCCATTGTaGTTAGTCTTGTATCACCAA +
Preference number: 4 (lower is better)
Translates to: TQLEVLGAGRQGTSPCQQCLFPL*LVLYHQ
Trigger: TTGGTGATACAAGACTAAGCACAATGGAAACAGGCA...TTGCTGGCACGGGGATGTGCCCTGCCTGCCAGCACCTAGGACTTCGAGTTGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376052.5
ENST00000651448.1
ENST00000651544.1
CDS-3UTR CCA 90 bp CAACTCGAAGTCCTAGGTGCTGGCAGGCAGGGCACATCCCCGTGCCAGCAATGTGAGAAGAGCCGTTGTTaGCAACATCAAATTCTTCCT +
Preference number: 4 (lower is better)
Translates to: QLEVLGAGRQGTSPCQQCEKSRC*QHQILP
Trigger: AGGAAGAATTTGATGTTGCCAACAACGGCTCTTCTC...ACATTGCTGGCACGGGGATGTGCCCTGCCTGCCAGCACCTAGGACTTCGAGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376052.5
ENST00000651448.1
ENST00000651544.1
ENST00000651748.1
CDS-3UTR CCA 90 bp CTAGGTGCTGGCAGGCAGGGCACATCCCCGTGCCAGCAATGTGAGGCATTAAGACTTCTCTTAAGCCCCTaGGATCCACACGTATGTTTA +
Preference number: 4 (lower is better)
Translates to: LGAGRQGTSPCQQCEALRLLLSP*DPHVCL
Trigger: TAAACATACGTGTGGATCCCAGGGGCTTAAGAGAAG...TCTTAATGCCTCACATTGCTGGCACGGGGATGTGCCCTGCCTGCCAGCACCTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376052.5
ENST00000651448.1
ENST00000651544.1
CDS-3UTR CCA 90 bp CAACTCGAAGTCCTAGGTGCTGGCAGGCAGGGCACATCCCCGTGCCAGCAATGTCTTTGCTTCACAAGCTaGACTGCATGTAGAACAAAC +
Preference number: 4 (lower is better)
Translates to: QLEVLGAGRQGTSPCQQCLCFTS*TACRTN
Trigger: GTTTGTTCTACATGCAGTCCAGCTTGTGAAGCAAAG...ACATTGCTGGCACGGGGATGTGCCCTGCCTGCCAGCACCTAGGACTTCGAGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376052.5
ENST00000651448.1
ENST00000651544.1
ENST00000651748.1
CDS-3UTR CCA 90 bp GCTCACCAGATGGCAGGGGCCACACTCAGCCCTCCTCCTGGCCGAGGGAATGTTATGGCTGGTTATATTTaGGTGGTAATGTCAAATTGC +
Preference number: 4 (lower is better)
Translates to: AHQMAGATLSPPPGRGNVMAGYI*VVMSNC
Trigger: GCAATTTGACATTACCACCCAAATATAACCAGCCAT...AACATTCCCTCGGCCAGGAGGAGGGCTGAGTGTGGCCCCTGCCATCTGGTGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651448.1
CDS-3UTR CCA 90 bp TGCTGGTCAGGTGGGACAGTGAAGCTAGAAGCTGATACTGGGGCTGCCTTGCAGTTCCTTCTGCATCAGTaGAAATGGCTCCGTCTTGAG +
Preference number: 4 (lower is better)
Translates to: CWSGGTVKLEADTGAALQFLLHQ*KWLRLE
Trigger: CTCAAGACGGAGCCATTTCCACTGATGCAGAAGGAA...CTGCAAGGCAGCCCCAGTATCAGCTTCTAGCTTCACTGTCCCACCTGACCAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651448.1
CDS-3UTR CCA 90 bp CCAACTCGAAGTCCTAGGTGCTGGCAGGCAGGGCACATCCCCGTGCCAGCAATGGTAAAAGATGCACAATaGGTCCATCCAAGTAACTTC +
Preference number: 4 (lower is better)
Translates to: PTRSPRCWQAGHIPVPAMVKDAQ*VHPSNF
Trigger: GAAGTTACTTGGATGGACCCATTGTGCATCTTTTAC...CATTGCTGGCACGGGGATGTGCCCTGCCTGCCAGCACCTAGGACTTCGAGTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376052.5
ENST00000651448.1
ENST00000651544.1
ENST00000651748.1
CDS-3UTR TCA 90 bp CAACTCGAAGTCCTAGGTGCTGGCAGGCAGGGCACATCCCCGTGCCAGCAATGTATTAGTTTATTTGCTTaGGAAGAGCCGTTGTTGGCA +
Preference number: 4 (lower is better)
Translates to: QLEVLGAGRQGTSPCQQCISLFA*EEPLLA
Trigger: TGCCAACAACGGCTCTTCTCAAGCAAATAAACTAAT...ACATTGCTGGCACGGGGATGTGCCCTGCCTGCCAGCACCTAGGACTTCGAGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376052.5
ENST00000651544.1
CDS-3UTR TCA 90 bp CCTAGGACAGGAAAAGCTTCAGTCAGTGTTCCTTTCTCTGGAAGAGAACAAAACCTCCTCCTGGCGCACTaGTACTCACACCAAGGGCCC +
Preference number: 4 (lower is better)
Translates to: PRTGKASVSVPFSGREQNLLLAH*YSHQGP
Trigger: GGGCCCTTGGTGTGAGTATCAGTGCGCCAGGAGGAG...GTTTTGTTCTCTTCCAGAGAAAGGAACACTGACTGAAGCTTTTCCTGTCCTAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651448.1
CDS-3UTR TCA 90 bp CCAACTCGAAGTCCTAGGTGCTGGCAGGCAGGGCACATCCCCGTGCCAGCAATGAAATGCCTTCGAATTTaGCCAGGTTTAAAGTGTACA +
Preference number: 4 (lower is better)
Translates to: PTRSPRCWQAGHIPVPAMKCLRI*PGLKCT
Trigger: TGTACACTTTAAACCTGGTCAAATTCGAAGGCATTT...CATTGCTGGCACGGGGATGTGCCCTGCCTGCCAGCACCTAGGACTTCGAGTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376052.5
ENST00000651448.1
ENST00000651544.1
ENST00000651748.1
CDS-3UTR TCA 90 bp ACCCAACTCGAAGTCCTAGGTGCTGGCAGGCAGGGCACATCCCCGTGCCAGCAAAAATGCCTTCGAATTTaGCCAGGTTTAAAGTGTACA +
Preference number: 4 (lower is better)
Translates to: TQLEVLGAGRQGTSPCQQKCLRI*PGLKCT
Trigger: TGTACACTTTAAACCTGGTCAAATTCGAAGGCATTT...TTGCTGGCACGGGGATGTGCCCTGCCTGCCAGCACCTAGGACTTCGAGTTGGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376052.5
ENST00000651448.1
ENST00000651544.1
ENST00000651748.1
CDS-3UTR GCA 90 bp CAGGTGAAAGTCCATGAGTGTGTGAGAGAGAACATGCATGTAGCTTTCATGGATCCATCAGTTGTAACCTaGATGCCCGGAGCCCCCGGG +
Preference number: 4 (lower is better)
Translates to: QVKVHECVRENMHVAFMDPSVVT*MPGAPG
Trigger: CCCGGGGGCTCCGGGCATGCAGGTTACAACTGATGG...ATCCATGAAAGCTACATGCATGTTCTCTCTCACACACTCATGGACTTTCACCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376052.5
CDS-3UTR GCA 90 bp GCTCCAGCAACTGCCACTCATTTGTGCTGGTTCTACTTTTTCCCCTTAATTGAACCATCAGTTGTAACCTaGATGCCCGGAGCCCCCGGG +
Preference number: 4 (lower is better)
Translates to: APATATHLCWFYFFPLIEPSVVT*MPGAPG
Trigger: CCCGGGGGCTCCGGGCATGCAGGTTACAACTGATGG...TTCAATTAAGGGGAAAAAGTAGAACCAGCACAAATGAGTGGCAGTTGCTGGAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000376052.5
ENST00000651448.1
ENST00000651544.1
CDS-3UTR GCA 90 bp CTAGGTGCTGGCAGGCAGGGCACATCCCCGTGCCAGCAATGTGAGGCATTAAGAAGTTCTTCAAAGTTATaGAGGGAGCCAGATCTTCGT +
Preference number: 4 (lower is better)
Translates to: LGAGRQGTSPCQQCEALRSSSKL*REPDLR
Trigger: ACGAAGATCTGGCTCCCTGCATAACTTTGAAGAACT...TCTTAATGCCTCACATTGCTGGCACGGGGATGTGCCCTGCCTGCCAGCACCTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376052.5
ENST00000651448.1
ENST00000651748.1
CDS-3UTR GCA 90 bp CAACTCGAAGTCCTAGGTGCTGGCAGGCAGGGCACATCCCCGTGCCAGCAATGTCAATTGATGAAGTCGTaGAACGTACAGAGGAAGATA +
Preference number: 4 (lower is better)
Translates to: QLEVLGAGRQGTSPCQQCQLMKS*NVQRKI
Trigger: TATCTTCCTCTGTACGTTGCACGACTTCATCAATTG...ACATTGCTGGCACGGGGATGTGCCCTGCCTGCCAGCACCTAGGACTTCGAGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376052.5
ENST00000651448.1
ENST00000651544.1
ENST00000651748.1
CDS-3UTR GCA 90 bp GTGTCTGAGCACTCCTTTCATCCGTCGCTCGGCCAGAGTCTGCAGGGCAGACTCCAATTGATGAAGTCGTaGAACGTACAGAGGAAGATA +
Preference number: 4 (lower is better)
Translates to: VSEHSFHPSLGQSLQGRLQLMKS*NVQRKI
Trigger: TATCTTCCTCTGTACGTTGCACGACTTCATCAATTG...GAGTCTGCCCTGCAGACTCTGGCCGAGCGACGGATGAAAGGAGTGCTCAGACAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651921.1
CDS-3UTR GCA 90 bp CTAGGTGCTGGCAGGCAGGGCACATCCCCGTGCCAGCAATGTGAGGCATTAAGATTATTGAAGCAGTTATaGTCCAGCAACTGCCACTCA +
Preference number: 4 (lower is better)
Translates to: LGAGRQGTSPCQQCEALRLLKQL*SSNCHS
Trigger: TGAGTGGCAGTTGCTGGAGCATAACTGCTTCAATAA...TCTTAATGCCTCACATTGCTGGCACGGGGATGTGCCCTGCCTGCCAGCACCTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376052.5
ENST00000651448.1
ENST00000651544.1
ENST00000651748.1
CDS-3UTR CCA 90 bp CAGGTGAAAGTCCATGAGTGTGTGAGAGAGAACATGCATGTAGCTTTCATGGATTCGCAGCGGTGGCCATaGACGCAGGATGGAGGACGA +
Preference number: 4 (lower is better)
Translates to: QVKVHECVRENMHVAFMDSQRWP*TQDGGR
Trigger: TCGTCCTCCATCCTGCGTCCATGGCCACCGCTGCGA...ATCCATGAAAGCTACATGCATGTTCTCTCTCACACACTCATGGACTTTCACCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376052.5
CDS-3UTR CCA 90 bp TTTTTGTTTGTCCATGTCACTGTGTCTGAGCACTCCTTTCATCCGTCGCTCGGCCTGCATCAGTGGAAATaGCTCCGTCTTGAGCCTGGG +
Preference number: 4 (lower is better)
Translates to: FLFVHVTVSEHSFHPSLGLHQWK*LRLEPG
Trigger: CCCAGGCTCAAGACGGAGCCATTTCCACTGATGCAG...GCCGAGCGACGGATGAAAGGAGTGCTCAGACACAGTGACATGGACAAACAAAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651921.1
CDS-3UTR CCA 90 bp CTAGGTGCTGGCAGGCAGGGCACATCCCCGTGCCAGCAATGTGAGGCATTAAGATTACTTCCCCACTCTTaGGAATGTTTAACTGAGGAG +
Preference number: 4 (lower is better)
Translates to: LGAGRQGTSPCQQCEALRLLPHS*ECLTEE
Trigger: CTCCTCAGTTAAACATTCCCAAGAGTGGGGAAGTAA...TCTTAATGCCTCACATTGCTGGCACGGGGATGTGCCCTGCCTGCCAGCACCTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651544.1
CDS-3UTR TCA 90 bp ACCTTTCCTACAAAGGGCATCTACGAGGGTGGATTTTTGTTTGTCCATGTCACTTCGGCAAATGCTGCCTaGTGGATCCTGGCTGCCCAG +
Preference number: 4 (lower is better)
Translates to: TFPTKGIYEGGFLFVHVTSANAA*WILAAQ
Trigger: CTGGGCAGCCAGGATCCATCAGGCAGCATTTGCCGA...AGTGACATGGACAAACAAAAATCCACCCTCGTAGATGCCCTTTGTAGGAAAGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651921.1
CDS-3UTR GCA 90 bp TGCACCCTCAGGAACCTCAATAAAATGCCTTCGAATTTGACCAGGTTTAAAGTGCCATCAGTTGTAACCTaGATGCCCGGAGCCCCCGGG +
Preference number: 4 (lower is better)
Translates to: CTLRNLNKMPSNLTRFKVPSVVT*MPGAPG
Trigger: CCCGGGGGCTCCGGGCATGCAGGTTACAACTGATGG...CACTTTAAACCTGGTCAAATTCGAAGGCATTTTATTGAGGTTCCTGAGGGTGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651448.1
CDS-3UTR GCA 90 bp CCAAAACCTATCATGCATGTCATAAGCTGCAACCCAACTCGAAGTCCTAGGTGCCAGGGCACATCCCCGTaGCAGCAATGTGAGGCATTA +
Preference number: 4 (lower is better)
Translates to: PKPIMHVISCNPTRSPRCQGTSP*QQCEAL
Trigger: TAATGCCTCACATTGCTGGCACGGGGATGTGCCCTG...GCACCTAGGACTTCGAGTTGGGTTGCAGCTTATGACATGCATGATAGGTTTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376052.5
ENST00000651448.1
ENST00000651544.1
ENST00000651748.1
CDS-3UTR CCA 90 bp CTCCATTCTCTTACTGGACTAAACCTATACAAATGGGGACCTGTATGTGTGTGCGCCATGGACGCAGGATaGAGGACGAGGAAGCGGCAA +
Preference number: 4 (lower is better)
Translates to: LHSLTGLNLYKWGPVCVCAMDAG*RTRKRQ
Trigger: TTGCCGCTTCCTCGTCCTCCATCCTGCGTCCATGGC...GCACACACATACAGGTCCCCATTTGTATAGGTTTAGTCCAGTAAGAGAATGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376052.5
CDS-3UTR CCA 90 bp CCAACTCGAAGTCCTAGGTGCTGGCAGGCAGGGCACATCCCCGTGCCAGCAATGATGAGAAACAATAAATaGAAGGTCTTTAAGGCGTTC +
Preference number: 4 (lower is better)
Translates to: PTRSPRCWQAGHIPVPAMMRNNK*KVFKAF
Trigger: GAACGCCTTAAAGACCTTCCATTTATTGTTTCTCAT...CATTGCTGGCACGGGGATGTGCCCTGCCTGCCAGCACCTAGGACTTCGAGTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376052.5
ENST00000651448.1
ENST00000651544.1
ENST00000651748.1
CDS-3UTR CCA 90 bp GTGTCTGAGCACTCCTTTCATCCGTCGCTCGGCCAGAGTCTGCAGGGCAGACTCATGGCTGGTTATATTTaGGTGGTAATGTCAAATTGC +
Preference number: 4 (lower is better)
Translates to: VSEHSFHPSLGQSLQGRLMAGYI*VVMSNC
Trigger: GCAATTTGACATTACCACCCAAATATAACCAGCCAT...GAGTCTGCCCTGCAGACTCTGGCCGAGCGACGGATGAAAGGAGTGCTCAGACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651921.1
CDS-3UTR CCA 90 bp CTAGGTGCTGGCAGGCAGGGCACATCCCCGTGCCAGCAATGTGAGGCATTAAGAGGAAGTAACAAAGAATaGCTGGTTATATTTGGGTGG +
Preference number: 4 (lower is better)
Translates to: LGAGRQGTSPCQQCEALRGSNKE*LVIFGW
Trigger: CCACCCAAATATAACCAGCCATTCTTTGTTACTTCC...TCTTAATGCCTCACATTGCTGGCACGGGGATGTGCCCTGCCTGCCAGCACCTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376052.5
ENST00000651448.1
ENST00000651544.1
ENST00000651748.1
CDS-3UTR CCA 90 bp CCAAAACCTATCATGCATGTCATAAGCTGCAACCCAACTCGAAGTCCTAGGTGCCTGCATCAGTGGAAATaGCTCCGTCTTGAGCCTGGG +
Preference number: 4 (lower is better)
Translates to: PKPIMHVISCNPTRSPRCLHQWK*LRLEPG
Trigger: CCCAGGCTCAAGACGGAGCCATTTCCACTGATGCAG...GCACCTAGGACTTCGAGTTGGGTTGCAGCTTATGACATGCATGATAGGTTTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376052.5
ENST00000651448.1
ENST00000651544.1
ENST00000651748.1
CDS-3UTR TCA 90 bp CCTATCATGCATGTCATAAGCTGCAACCCAACTCGAAGTCCTAGGTGCTGGCAGTGGATAGGCATCGCCTaGACCCATCTGTCTTTTGTT +
Preference number: 4 (lower is better)
Translates to: PIMHVISCNPTRSPRCWQWIGIA*THLSFV
Trigger: AACAAAAGACAGATGGGTTCAGGCGATGCCTATCCA...CTGCCAGCACCTAGGACTTCGAGTTGGGTTGCAGCTTATGACATGCATGATAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376052.5
ENST00000651448.1
ENST00000651544.1
ENST00000651748.1
CDS-3UTR TCA 90 bp GAATTTGAGCACCAGGAGCTACCCCATTCCGTTCAGGTTCTTCTGGAAAGTGTCAACACAGTGAGTATGTaGACACAGGTCAAGGTGCCC +
Preference number: 4 (lower is better)
Translates to: EFEHQELPHSVQVLLESVNTVSM*TQVKVP
Trigger: GGGCACCTTGACCTGTGTTCACATACTCACTGTGTT...GACACTTTCCAGAAGAACCTGAACGGAATGGGGTAGCTCCTGGTGCTCAAATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651448.1
CDS-3UTR GCA 90 bp CCTATCATGCATGTCATAAGCTGCAACCCAACTCGAAGTCCTAGGTGCTGGCAGGATCTCGGAGGTAGATaGCACGGTTATTTCCAACAG +
Preference number: 4 (lower is better)
Translates to: PIMHVISCNPTRSPRCWQDLGGR*HGYFQQ
Trigger: CTGTTGGAAATAACCGTGGCATCTACCTCCGAGATC...CTGCCAGCACCTAGGACTTCGAGTTGGGTTGCAGCTTATGACATGCATGATAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376052.5
ENST00000651448.1
ENST00000651544.1
CDS-3UTR GCA 90 bp CTAGGTGCTGGCAGGCAGGGCACATCCCCGTGCCAGCAATGTGAGGCATTAAGATTCATTTACTTTTGCTaGTATAACTGCAGTGATCGG +
Preference number: 4 (lower is better)
Translates to: LGAGRQGTSPCQQCEALRFIYFC*YNCSDR
Trigger: CCGATCACTGCAGTTATAGCAGCAAAAGTAAATGAA...TCTTAATGCCTCACATTGCTGGCACGGGGATGTGCCCTGCCTGCCAGCACCTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376052.5
ENST00000651448.1
ENST00000651544.1
CDS-3UTR GCA 90 bp GCTCCAGCAACTGCCACTCATTTGTGCTGGTTCTACTTTTTCCCCTTAATTGAAACTCGAAGTCCTAGGTaGTGGCAGGCAGGGCACATC +
Preference number: 4 (lower is better)
Translates to: APATATHLCWFYFFPLIETRSPR*WQAGHI
Trigger: GATGTGCCCTGCCTGCCAGCACCTAGGACTTCGAGT...TTCAATTAAGGGGAAAAAGTAGAACCAGCACAAATGAGTGGCAGTTGCTGGAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376052.5
ENST00000651448.1
ENST00000651544.1
ENST00000651748.1
CDS-3UTR GCA 90 bp CCTAGGACAGGAAAAGCTTCAGTCAGTGTTCCTTTCTCTGGAAGAGAACAAAACACTCGAAGTCCTAGGTaGTGGCAGGCAGGGCACATC +
Preference number: 4 (lower is better)
Translates to: PRTGKASVSVPFSGREQNTRSPR*WQAGHI
Trigger: GATGTGCCCTGCCTGCCAGCACCTAGGACTTCGAGT...GTTTTGTTCTCTTCCAGAGAAAGGAACACTGACTGAAGCTTTTCCTGTCCTAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000651448.1
ENST00000651748.1
CDS-3UTR CCA 90 bp CCTATCATGCATGTCATAAGCTGCAACCCAACTCGAAGTCCTAGGTGCTGGCAGCTCCACTGGTCACAATaGAGAGCAGGTTTCCATCAT +
Preference number: 4 (lower is better)
Translates to: PIMHVISCNPTRSPRCWQLHWSQ*RAGFHH
Trigger: ATGATGGAAACCTGCTCTCCATTGTGACCAGTGGAG...CTGCCAGCACCTAGGACTTCGAGTTGGGTTGCAGCTTATGACATGCATGATAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376052.5
ENST00000651448.1
ENST00000651544.1
CDS-3UTR CCA 90 bp AGTTATGCAGGGAGCCAGATCTTCGTATTTCAAGGAGGACTGAACATCAAAGCGCTGCATCAGTGGAAATaGCTCCGTCTTGAGCCTGGG +
Preference number: 4 (lower is better)
Translates to: SYAGSQIFVFQGGLNIKALHQWK*LRLEPG
Trigger: CCCAGGCTCAAGACGGAGCCATTTCCACTGATGCAG...CGCTTTGATGTTCAGTCCTCCTTGAAATACGAAGATCTGGCTCCCTGCATAACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651448.1
ENST00000651748.1
3UTR CAA 72 bp TTGCTGACTTTTGGCTCTTCTCCTAAGCCACTCTTATaGAGTGTCTTTAGCTGGGCTGGCAGGGGCAGTCTA +
Preference number: 4 (lower is better)
Translates to: LLTFGSSPKPLL*SVFSWAGRGSL
Trigger: TAGACTGCCCCTGCCAGCCCAGCTAAAGACACTCAATAAGAGTGGCTTAGGAGAAGAGCCAAAAGTCAGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493770.2
3UTR CAA 72 bp AGACCTGAAAGGATCAGGGCAATGCCTCCACATGCATaGGGGGAAGACATAGATGTTCCATTCATCAGCTGC +
Preference number: 4 (lower is better)
Translates to: RPERIRAMPPHA*GEDIDVPFISC
Trigger: GCAGCTGATGAATGGAACATCTATGTCTTCCCCCAATGCATGTGGAGGCATTGCCCTGATCCTTTCAGGTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651448.1
CDS-3UTR TCA 90 bp CTCCATTCTCTTACTGGACTAAACCTATACAAATGGGGACCTGTATGTGTGTGCGCTACATGTGTCCCATaGGCTCCTCCACTGGTCACA +
Preference number: 4 (lower is better)
Translates to: LHSLTGLNLYKWGPVCVCATCVP*APPLVT
Trigger: TGTGACCAGTGGAGGAGCTCATGGGACACATGTAGC...GCACACACATACAGGTCCCCATTTGTATAGGTTTAGTCCAGTAAGAGAATGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376052.5
CDS-3UTR TCA 90 bp CAACCTTTCCTACAAAGGGCATCTACGAGGGTGGATTTTTGTTTGTCCATGTCAGCTACATGTGTCCCATaGGCTCCTCCACTGGTCACA +
Preference number: 4 (lower is better)
Translates to: QPFLQRASTRVDFCLSMSATCVP*APPLVT
Trigger: TGTGACCAGTGGAGGAGCTCATGGGACACATGTAGC...TGACATGGACAAACAAAAATCCACCCTCGTAGATGCCCTTTGTAGGAAAGGTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651448.1
CDS-3UTR TCA 90 bp CGAACACACTGTCACTTCAGCCCATGTTGCACCCTCAGGAACCTCAATAAAATGCCCGTGCCAGCAATGTaGGGCATTAAGAAAACACCA +
Preference number: 4 (lower is better)
Translates to: RTHCHFSPCCTLRNLNKMPVPAM*GIKKTP
Trigger: TGGTGTTTTCTTAATGCCTCACATTGCTGGCACGGG...CATTTTATTGAGGTTCCTGAGGGTGCAACATGGGCTGAAGTGACAGTGTGTTCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000651448.1
ENST00000651748.1
CDS-3UTR TCA 90 bp AGACTTGCCCACCAACGAGCAATGCAAAATTCAATTGCTTTTCCACCTAGGACATGTAAGGGGAGCTGCTaGGGCACAAACAGCAGGCTA +
Preference number: 4 (lower is better)
Translates to: RLAHQRAMQNSIAFPPRTCKGSC*GTNSRL
Trigger: TAGCCTGCTGTTTGTGCCTCAGCAGCTCCCCTTACA...TGTCCTAGGTGGAAAAGCAATTGAATTTTGCATTGCTCGTTGGTGGGCAAGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000651448.1
CDS-3UTR GCA 90 bp CCAAAACCTATCATGCATGTCATAAGCTGCAACCCAACTCGAAGTCCTAGGTGCGGCAATGCCTCCACATaGATTGGGGGAAGACATAGA +
Preference number: 4 (lower is better)
Translates to: PKPIMHVISCNPTRSPRCGNAST*IGGRHR
Trigger: TCTATGTCTTCCCCCAATGCATGTGGAGGCATTGCC...GCACCTAGGACTTCGAGTTGGGTTGCAGCTTATGACATGCATGATAGGTTTTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376052.5
ENST00000651448.1
ENST00000651544.1
CDS-3UTR GCA 90 bp CCTATCATGCATGTCATAAGCTGCAACCCAACTCGAAGTCCTAGGTGCTGGCAGACCTGCGTTAGGGGATaGTATATCATAGCCACATAC +
Preference number: 4 (lower is better)
Translates to: PIMHVISCNPTRSPRCWQTCVRG*YIIATY
Trigger: GTATGTGGCTATGATATAGCATCCCCTAACGCAGGT...CTGCCAGCACCTAGGACTTCGAGTTGGGTTGCAGCTTATGACATGCATGATAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376052.5
ENST00000651448.1
ENST00000651544.1
CDS-3UTR GCA 90 bp CGAACACACTGTCACTTCAGCCCATGTTGCACCCTCAGGAACCTCAATAAAATGTCTGAAGAGCGGACCTaGGTTAGGGGATGCTATATC +
Preference number: 4 (lower is better)
Translates to: RTHCHFSPCCTLRNLNKMSEERT*VRGCYI
Trigger: GATATAGCATCCCCTAACGCAGGTCCGCTCTTCAGA...CATTTTATTGAGGTTCCTGAGGGTGCAACATGGGCTGAAGTGACAGTGTGTTCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651448.1
CDS-3UTR GCA 90 bp CCAAAACCTATCATGCATGTCATAAGCTGCAACCCAACTCGAAGTCCTAGGTGCGACATCACTGAGACTTaGCCACCAACGAGCAATGCA +
Preference number: 4 (lower is better)
Translates to: PKPIMHVISCNPTRSPRCDITET*PPTSNA
Trigger: TGCATTGCTCGTTGGTGGGCAAGTCTCAGTGATGTC...GCACCTAGGACTTCGAGTTGGGTTGCAGCTTATGACATGCATGATAGGTTTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376052.5
ENST00000651448.1
ENST00000651544.1
ENST00000651748.1
CDS-3UTR GCA 90 bp CAGGTGAAAGTCCATGAGTGTGTGAGAGAGAACATGCATGTAGCTTTCATGGATCAGGGCACATCCCCGTaGCAGCAATGTGAGGCATTA +
Preference number: 4 (lower is better)
Translates to: QVKVHECVRENMHVAFMDQGTSP*QQCEAL
Trigger: TAATGCCTCACATTGCTGGCACGGGGATGTGCCCTG...ATCCATGAAAGCTACATGCATGTTCTCTCTCACACACTCATGGACTTTCACCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376052.5
CDS-3UTR GCA 90 bp TGTTTATTTGGTGGAGGAATGACGAGAGATGCACGTGCAGTAGCCAAAGATAAAACTCGAAGTCCTAGGTaGTGGCAGGCAGGGCACATC +
Preference number: 4 (lower is better)
Translates to: CLFGGGMTRDARAVAKDKTRSPR*WQAGHI
Trigger: GATGTGCCCTGCCTGCCAGCACCTAGGACTTCGAGT...TTTATCTTTGGCTACTGCACGTGCATCTCTCGTCATTCCTCCACCAAATAAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376052.5
CDS-3UTR CCA 90 bp CCTATCATGCATGTCATAAGCTGCAACCCAACTCGAAGTCCTAGGTGCTGGCAGAATTCTCCCAGAATTTaGCCAGTGAGTTGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: PIMHVISCNPTRSPRCWQNSPRI*PVSCFS
Trigger: GGAGAAGCAACTCACTGGCCAAATTCTGGGAGAATT...CTGCCAGCACCTAGGACTTCGAGTTGGGTTGCAGCTTATGACATGCATGATAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376052.5
ENST00000651448.1
ENST00000651544.1
CDS-3UTR CCA 90 bp CTAGGTGCTGGCAGGCAGGGCACATCCCCGTGCCAGCAATGTGAGGCATTAAGACAGTGTTCCTTTCTCTaGAAGAGAACAAAACTTATA +
Preference number: 4 (lower is better)
Translates to: LGAGRQGTSPCQQCEALRQCSFL*KRTKLI
Trigger: TATAAGTTTTGTTCTCTTCCAGAGAAAGGAACACTG...TCTTAATGCCTCACATTGCTGGCACGGGGATGTGCCCTGCCTGCCAGCACCTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376052.5
ENST00000651448.1
ENST00000651544.1
ENST00000651748.1
CDS-3UTR CCA 90 bp CTAGGTGCTGGCAGGCAGGGCACATCCCCGTGCCAGCAATGTGAGGCATTAAGAGTAACAAAGAATGGCTaGTTATATTTGGGTGGTAAT +
Preference number: 4 (lower is better)
Translates to: LGAGRQGTSPCQQCEALRVTKNG*LYLGGN
Trigger: ATTACCACCCAAATATAACCAGCCATTCTTTGTTAC...TCTTAATGCCTCACATTGCTGGCACGGGGATGTGCCCTGCCTGCCAGCACCTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376052.5
ENST00000651448.1
ENST00000651544.1
ENST00000651748.1
CDS-3UTR CCA 90 bp CTCCATTCTCTTACTGGACTAAACCTATACAAATGGGGACCTGTATGTGTGTGCCTGCATCAGTGGAAATaGCTCCGTCTTGAGCCTGGG +
Preference number: 4 (lower is better)
Translates to: LHSLTGLNLYKWGPVCVCLHQWK*LRLEPG
Trigger: CCCAGGCTCAAGACGGAGCCATTTCCACTGATGCAG...GCACACACATACAGGTCCCCATTTGTATAGGTTTAGTCCAGTAAGAGAATGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376052.5
CDS-3UTR CCA 90 bp CTGACTTTTGGCTCTTCTCCTAAGCCACTCTTATTGAGTGTCTTTAGCTGGGCTTTGAGTGTCTTTAGCTaGGCTGGCAGGGGCAGTCTA +
Preference number: 4 (lower is better)
Translates to: LTFGSSPKPLLLSVFSWALSVFS*AGRGSL
Trigger: TAGACTGCCCCTGCCAGCCCAGCTAAAGACACTCAA...AGCCCAGCTAAAGACACTCAATAAGAGTGGCTTAGGAGAAGAGCCAAAAGTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493770.2
CDS-3UTR TCA 90 bp CCAAAACCTATCATGCATGTCATAAGCTGCAACCCAACTCGAAGTCCTAGGTGCATTAGCTTTCAGACCTaGAAGGATCAGGGCAATGCC +
Preference number: 4 (lower is better)
Translates to: PKPIMHVISCNPTRSPRCISFQT*KDQGNA
Trigger: GGCATTGCCCTGATCCTTTCAGGTCTGAAAGCTAAT...GCACCTAGGACTTCGAGTTGGGTTGCAGCTTATGACATGCATGATAGGTTTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376052.5
ENST00000651448.1
ENST00000651544.1
CDS-3UTR TCA 90 bp CCAAAACCTATCATGCATGTCATAAGCTGCAACCCAACTCGAAGTCCTAGGTGCGGCGTTCCAAATCACTaGTTTGCTCATGGCGAATCT +
Preference number: 4 (lower is better)
Translates to: PKPIMHVISCNPTRSPRCGVPNH*FAHGES
Trigger: AGATTCGCCATGAGCAAATCAGTGATTTGGAACGCC...GCACCTAGGACTTCGAGTTGGGTTGCAGCTTATGACATGCATGATAGGTTTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376052.5
ENST00000651448.1
ENST00000651544.1
ENST00000651748.1
CDS-3UTR GCA 90 bp CCTATCATGCATGTCATAAGCTGCAACCCAACTCGAAGTCCTAGGTGCTGGCAGGAAATACAGGTTCAATaGCAACGCCATGATCTGAAG +
Preference number: 4 (lower is better)
Translates to: PIMHVISCNPTRSPRCWQEIQVQ*QRHDLK
Trigger: CTTCAGATCATGGCGTTGGCATTGAACCTGTATTTC...CTGCCAGCACCTAGGACTTCGAGTTGGGTTGCAGCTTATGACATGCATGATAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376052.5
ENST00000651448.1
ENST00000651544.1
CDS-3UTR GCA 90 bp CCTATCATGCATGTCATAAGCTGCAACCCAACTCGAAGTCCTAGGTGCTGGCAGTTCATGGCTTCGATATaGTCTTTGCTTCACAAGCTG +
Preference number: 4 (lower is better)
Translates to: PIMHVISCNPTRSPRCWQFMASI*SLLHKL
Trigger: CAGCTTGTGAAGCAAAGAGCATATCGAAGCCATGAA...CTGCCAGCACCTAGGACTTCGAGTTGGGTTGCAGCTTATGACATGCATGATAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376052.5
ENST00000651448.1
ENST00000651544.1
ENST00000651748.1
CDS-3UTR GCA 90 bp CCTATCATGCATGTCATAAGCTGCAACCCAACTCGAAGTCCTAGGTGCTGGCAGAGTTCTTCAAAGTTATaGAGGGAGCCAGATCTTCGT +
Preference number: 4 (lower is better)
Translates to: PIMHVISCNPTRSPRCWQSSSKL*REPDLR
Trigger: ACGAAGATCTGGCTCCCTGCATAACTTTGAAGAACT...CTGCCAGCACCTAGGACTTCGAGTTGGGTTGCAGCTTATGACATGCATGATAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376052.5
ENST00000651448.1
ENST00000651748.1
CDS-3UTR GCA 90 bp CCTATCATGCATGTCATAAGCTGCAACCCAACTCGAAGTCCTAGGTGCTGGCAGATAGCATCCAGGTCCTaGCCCTTTAGGTATTTTATC +
Preference number: 4 (lower is better)
Translates to: PIMHVISCNPTRSPRCWQIASRS*PFRYFI
Trigger: GATAAAATACCTAAAGGGGCAGGACCTGGATGCTAT...CTGCCAGCACCTAGGACTTCGAGTTGGGTTGCAGCTTATGACATGCATGATAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376052.5
ENST00000651448.1
ENST00000651544.1
ENST00000651748.1
CDS-3UTR GCA 90 bp TTTTGTTTGTCCATGTCACTGTGTCTGAGCACTCCTTTCATCCGTCGCTCGGCCATAGCATCCAGGTCCTaGCCCTTTAGGTATTTTATC +
Preference number: 4 (lower is better)
Translates to: FCLSMSLCLSTPFIRRSAIASRS*PFRYFI
Trigger: GATAAAATACCTAAAGGGGCAGGACCTGGATGCTAT...GGCCGAGCGACGGATGAAAGGAGTGCTCAGACACAGTGACATGGACAAACAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651921.1
CDS-3UTR GCA 90 bp GTATTTCAAGGAGGACTGAACATCAAAGCGGTTGATTCCTTCCGATGCATGAATCAGGTCAAGGTGCCCTaGTTTTGTAAGGGGAGCTGC +
Preference number: 4 (lower is better)
Translates to: VFQGGLNIKAVDSFRCMNQVKVP*FCKGSC
Trigger: GCAGCTCCCCTTACAAAAGCAGGGCACCTTGACCTG...ATTCATGCATCGGAAGGAATCAACCGCTTTGATGTTCAGTCCTCCTTGAAATAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651448.1
CDS-3UTR CCA 90 bp TTGGTGGAGGTATTAAGTAGTAATGAACAGGGATTACATCAGCTTTCTTTCCTATCGCAGCGGTGGCCATaGACGCAGGATGGAGGACGA +
Preference number: 4 (lower is better)
Translates to: LVEVLSSNEQGLHQLSFLSQRWP*TQDGGR
Trigger: TCGTCCTCCATCCTGCGTCCATGGCCACCGCTGCGA...TAGGAAAGAAAGCTGATGTAATCCCTGTTCATTACTACTTAATACCTCCACCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651448.1
CDS-3UTR CCA 90 bp CCTATCATGCATGTCATAAGCTGCAACCCAACTCGAAGTCCTAGGTGCTGGCAGGAGAAGAGCCGTTGTTaGCAACATCAAATTCTTCCT +
Preference number: 4 (lower is better)
Translates to: PIMHVISCNPTRSPRCWQEKSRC*QHQILP
Trigger: AGGAAGAATTTGATGTTGCCAACAACGGCTCTTCTC...CTGCCAGCACCTAGGACTTCGAGTTGGGTTGCAGCTTATGACATGCATGATAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376052.5
ENST00000651448.1
ENST00000651544.1
ENST00000651748.1
CDS-3UTR CCA 90 bp TGCACCCTCAGGAACCTCAATAAAATGCCTTCGAATTTGACCAGGTTTAAAGTGCTGCATCAGTGGAAATaGCTCCGTCTTGAGCCTGGG +
Preference number: 4 (lower is better)
Translates to: CTLRNLNKMPSNLTRFKVLHQWK*LRLEPG
Trigger: CCCAGGCTCAAGACGGAGCCATTTCCACTGATGCAG...CACTTTAAACCTGGTCAAATTCGAAGGCATTTTATTGAGGTTCCTGAGGGTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000651448.1
ENST00000651748.1
CDS-3UTR CCA 90 bp CGAACACACTGTCACTTCAGCCCATGTTGCACCCTCAGGAACCTCAATAAAATGCTAACTAGTCATGACTaGGATCGGCTATCCACCATC +
Preference number: 4 (lower is better)
Translates to: RTHCHFSPCCTLRNLNKMLTSHD*DRLSTI
Trigger: GATGGTGGATAGCCGATCCCAGTCATGACTAGTTAG...CATTTTATTGAGGTTCCTGAGGGTGCAACATGGGCTGAAGTGACAGTGTGTTCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651448.1
CDS-3UTR TCA 90 bp TGTTTATTTGGTGGAGGAATGACGAGAGATGCACGTGCAGTAGCCAAAGATAAAGCAAGGGCCACTCTGTaGACAGGGTCCCAGATTTTT +
Preference number: 4 (lower is better)
Translates to: CLFGGGMTRDARAVAKDKARATL*TGSQIF
Trigger: AAAAATCTGGGACCCTGTTCACAGAGTGGCCCTTGC...TTTATCTTTGGCTACTGCACGTGCATCTCTCGTCATTCCTCCACCAAATAAACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376052.5
CDS-3UTR TCA 90 bp CAGGTGAAAGTCCATGAGTGTGTGAGAGAGAACATGCATGTAGCTTTCATGGATCCCGTGCCAGCAATGTaGGGCATTAAGAAAACACCA +
Preference number: 4 (lower is better)
Translates to: QVKVHECVRENMHVAFMDPVPAM*GIKKTP
Trigger: TGGTGTTTTCTTAATGCCTCACATTGCTGGCACGGG...ATCCATGAAAGCTACATGCATGTTCTCTCTCACACACTCATGGACTTTCACCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376052.5
CDS-3UTR TCA 90 bp GCTCCAGCAACTGCCACTCATTTGTGCTGGTTCTACTTTTTCCCCTTAATTGAATATTTGGTGGAGGAATaGCGAGAGATGCACGTGCAG +
Preference number: 4 (lower is better)
Translates to: APATATHLCWFYFFPLIEYLVEE*REMHVQ
Trigger: CTGCACGTGCATCTCTCGTCATTCCTCCACCAAATA...TTCAATTAAGGGGAAAAAGTAGAACCAGCACAAATGAGTGGCAGTTGCTGGAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376052.5
CDS-3UTR TCA 90 bp CTGACTTTTGGCTCTTCTCCTAAGCCACTCTTATTGAGTGTCTTTAGCTGGGCTCTAAGCCACTCTTATTaGGTGTCTTTAGCTGGGCTG +
Preference number: 4 (lower is better)
Translates to: LTFGSSPKPLLLSVFSWALSHSY*VSLAGL
Trigger: CAGCCCAGCTAAAGACACTCAATAAGAGTGGCTTAG...AGCCCAGCTAAAGACACTCAATAAGAGTGGCTTAGGAGAAGAGCCAAAAGTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493770.2
CDS-3UTR TCA 90 bp TCTTTAAGGCGTTCCAAATCACTGATTTGCTCATGGCGAATCTGTAGTCGAATTGAGGCGAGAATAGCTTaGACCCGGAAGGCAGAGGTT +
Preference number: 4 (lower is better)
Translates to: SLRRSKSLICSWRICSRIEARIA*TRKAEV
Trigger: AACCTCTGCCTTCCGGGTTCAAGCTATTCTCGCCTC...AATTCGACTACAGATTCGCCATGAGCAAATCAGTGATTTGGAACGCCTTAAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651448.1
CDS-3UTR GCA 90 bp CCAAAACCTATCATGCATGTCATAAGCTGCAACCCAACTCGAAGTCCTAGGTGCCAGACTTCGCCATCATaGCATACCAAGCAGTCATAT +
Preference number: 4 (lower is better)
Translates to: PKPIMHVISCNPTRSPRCQTSPS*HTKQSY
Trigger: ATATGACTGCTTGGTATGGCATGATGGCGAAGTCTG...GCACCTAGGACTTCGAGTTGGGTTGCAGCTTATGACATGCATGATAGGTTTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376052.5
ENST00000651448.1
ENST00000651544.1
CDS-3UTR GCA 90 bp AATGGAAGGTCTTTAAGGCGTTCCAAATCACTGATTTGCTCATGGCGAATCTGTAAAGGATCAGGGCAATaGCTCCACATGCATTGGGGG +
Preference number: 4 (lower is better)
Translates to: NGRSLRRSKSLICSWRICKGSGQ*LHMHWG
Trigger: CCCCCAATGCATGTGGAGGCATTGCCCTGATCCTTT...ACAGATTCGCCATGAGCAAATCAGTGATTTGGAACGCCTTAAAGACCTTCCATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651448.1
CDS-3UTR GCA 90 bp CCTATCATGCATGTCATAAGCTGCAACCCAACTCGAAGTCCTAGGTGCTGGCAGTTTTGCTGCTATAACTaGAGTGATCGGAACTCTGAA +
Preference number: 4 (lower is better)
Translates to: PIMHVISCNPTRSPRCWQFCCYN*SDRNSE
Trigger: TTCAGAGTTCCGATCACTGCAGTTATAGCAGCAAAA...CTGCCAGCACCTAGGACTTCGAGTTGGGTTGCAGCTTATGACATGCATGATAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376052.5
ENST00000651448.1
ENST00000651544.1
CDS-3UTR GCA 90 bp CCAAAACCTATCATGCATGTCATAAGCTGCAACCCAACTCGAAGTCCTAGGTGCACTGCCACTCATTTGTaGTGGTTCTACTTTTTCCCC +
Preference number: 4 (lower is better)
Translates to: PKPIMHVISCNPTRSPRCTATHL*WFYFFP
Trigger: GGGGAAAAAGTAGAACCAGCACAAATGAGTGGCAGT...GCACCTAGGACTTCGAGTTGGGTTGCAGCTTATGACATGCATGATAGGTTTTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376052.5
ENST00000651448.1
ENST00000651544.1
ENST00000651748.1
CDS-3UTR GCA 90 bp TTTTCATTCGTTCCTTTTCAGCATCCAATTGATGAAGTCGTGCAACGTACAGAGCCGGAAGGCAGAGGTTaGAATGAGCCGAGATCACAC +
Preference number: 4 (lower is better)
Translates to: FSFVPFQHPIDEVVQRTEPEGRG*NEPRSH
Trigger: GTGTGATCTCGGCTCATTGCAACCTCTGCCTTCCGG...CTCTGTACGTTGCACGACTTCATCAATTGGATGCTGAAAAGGAACGAATGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651448.1
CDS-3UTR GCA 90 bp GTATTTCAAGGAGGACTGAACATCAAAGCGGTTGATTCCTTCCGATGCATGAATCAGTACTGTGTTGTGTaGAGCACAGACCTCCCCAGA +
Preference number: 4 (lower is better)
Translates to: VFQGGLNIKAVDSFRCMNQYCVV*STDLPR
Trigger: TCTGGGGAGGTCTGTGCTGCACACAACACAGTACTG...ATTCATGCATCGGAAGGAATCAACCGCTTTGATGTTCAGTCCTCCTTGAAATAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651448.1
CDS-3UTR CCA 90 bp TATATTTGGGTGGTAATGTCAAATTGCTTGATTTCTTCTTCCCTAGAAGTGCAACGAAGTCCTAGGTGCTaGCAGGCAGGGCACATCCCC +
Preference number: 4 (lower is better)
Translates to: YIWVVMSNCLISSSLEVQRSPRC*QAGHIP
Trigger: GGGGATGTGCCCTGCCTGCCAGCACCTAGGACTTCG...TTGCACTTCTAGGGAAGAAGAAATCAAGCAATTTGACATTACCACCCAAATATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651448.1
ENST00000651748.1
CDS-3UTR CCA 90 bp TGTATCTTTACAATACCTGATAAAGATTCAGCTGTCTGGCACTTACACATGTATCGAAGTCCTAGGTGCTaGCAGGCAGGGCACATCCCC +
Preference number: 4 (lower is better)
Translates to: CIFTIPDKDSAVWHLHMYRSPRC*QAGHIP
Trigger: GGGGATGTGCCCTGCCTGCCAGCACCTAGGACTTCG...ATACATGTGTAAGTGCCAGACAGCTGAATCTTTATCAGGTATTGTAAAGATACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376052.5
ENST00000651448.1
ENST00000651544.1
ENST00000651748.1
3UTR CAA 72 bp GCCCCTGGGATCCACACGTATGTTTATGTGTCTACATaGATTCATGAGTTCCAAATGGCTGGGACACTGAAC +
Preference number: 4 (lower is better)
Translates to: APGIHTYVYVST*IHEFQMAGTLN
Trigger: GTTCAGTGTCCCAGCCATTTGGAACTCATGAATCAATGTAGACACATAAACATACGTGTGGATCCCAGGGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651448.1
CDS-3UTR TCA 90 bp CTCCATTCTCTTACTGGACTAAACCTATACAAATGGGGACCTGTATGTGTGTGCCTTAAGCACTCTTCCTaGAAGGCCAACAATCTCACC +
Preference number: 4 (lower is better)
Translates to: LHSLTGLNLYKWGPVCVCLKHSS*KANNLT
Trigger: GGTGAGATTGTTGGCCTTTCAGGAAGAGTGCTTAAG...GCACACACATACAGGTCCCCATTTGTATAGGTTTAGTCCAGTAAGAGAATGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376052.5
CDS-3UTR TCA 90 bp GCTCCAGCAACTGCCACTCATTTGTGCTGGTTCTACTTTTTCCCCTTAATTGAATTGATGGAAAGAATTTaGGCACCAGGAGCTACCCCA +
Preference number: 4 (lower is better)
Translates to: APATATHLCWFYFFPLIELMERI*APGATP
Trigger: TGGGGTAGCTCCTGGTGCTCAAATTCTTTCCATCAA...TTCAATTAAGGGGAAAAAGTAGAACCAGCACAAATGAGTGGCAGTTGCTGGAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000376052.5
ENST00000651448.1
ENST00000651544.1
CDS-3UTR TCA 90 bp CTGACTTTTGGCTCTTCTCCTAAGCCACTCTTATTGAGTGTCTTTAGCTGGGCTAACACCTATCACACTTaGTGTAGTTCCACCTGGACA +
Preference number: 4 (lower is better)
Translates to: LTFGSSPKPLLLSVFSWANTYHT*CSSTWT
Trigger: TGTCCAGGTGGAACTACATCAAGTGTGATAGGTGTT...AGCCCAGCTAAAGACACTCAATAAGAGTGGCTTAGGAGAAGAGCCAAAAGTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493770.2
CDS-3UTR TCA 90 bp CCAAAACCTATCATGCATGTCATAAGCTGCAACCCAACTCGAAGTCCTAGGTGCTTCATTCTGATGCTCTaGACCTCAAGAGGATGTGAA +
Preference number: 4 (lower is better)
Translates to: PKPIMHVISCNPTRSPRCFILML*TSRGCE
Trigger: TTCACATCCTCTTGAGGTTCAGAGCATCAGAATGAA...GCACCTAGGACTTCGAGTTGGGTTGCAGCTTATGACATGCATGATAGGTTTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376052.5
ENST00000651448.1
ENST00000651544.1
ENST00000651748.1
CDS-3UTR TCA 90 bp GCTCCAGCAACTGCCACTCATTTGTGCTGGTTCTACTTTTTCCCCTTAATTGAAGCAGGTGAAAGTCCATaGGTGTGTGAGAGAGAACAT +
Preference number: 4 (lower is better)
Translates to: APATATHLCWFYFFPLIEAGESP*VCEREH
Trigger: ATGTTCTCTCTCACACACTCATGGACTTTCACCTGC...TTCAATTAAGGGGAAAAAGTAGAACCAGCACAAATGAGTGGCAGTTGCTGGAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376052.5
CDS-3UTR TCA 90 bp GCCATACCAAGCAGTCATATACAGGGCCAGGATCGCTGTATTTCTTCTCAAAAGACATCACCGTGTCACTaGCTATTGTCCCTAATTGGT +
Preference number: 4 (lower is better)
Translates to: AIPSSHIQGQDRCISSQKTSPCH*LLSLIG
Trigger: ACCAATTAGGGACAATAGTCAGTGACACGGTGATGT...CTTTTGAGAAGAAATACAGCGATCCTGGCCCTGTATATGACTGCTTGGTATGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651448.1
CDS-3UTR GCA 90 bp CAAACTTTGCTGACACCTCAGAAGAACACGAACACACTGTCACTTCAGCCCATGTGCCAATATGATATTTaGCTGAGGGATTTGTCCAGC +
Preference number: 4 (lower is better)
Translates to: QTLLTPQKNTNTLSLQPMCQYDI*LRDLSS
Trigger: GCTGGACAAATCCCTCAGGCAAATATCATATTGGCA...CATGGGCTGAAGTGACAGTGTGTTCGTGTTCTTCTGAGGTGTCAGCAAAGTTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651448.1
ENST00000651748.1
CDS-3UTR GCA 90 bp AGATTTATTGAAGCAGTTATGCTCCAGCAACTGCCACTCATTTGTGCTGGTTCTGGCAATGCCTCCACATaGATTGGGGGAAGACATAGA +
Preference number: 4 (lower is better)
Translates to: RFIEAVMLQQLPLICAGSGNAST*IGGRHR
Trigger: TCTATGTCTTCCCCCAATGCATGTGGAGGCATTGCC...AGAACCAGCACAAATGAGTGGCAGTTGCTGGAGCATAACTGCTTCAATAAATCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000376052.5
ENST00000651448.1
ENST00000651544.1
CDS-3UTR GCA 90 bp AGATTCAGCTGTCTGGCACTTACACATGTATTCATAGAGTTCATTCTGATGCTCAAAGGATCAGGGCAATaGCTCCACATGCATTGGGGG +
Preference number: 4 (lower is better)
Translates to: RFSCLALTHVFIEFILMLKGSGQ*LHMHWG
Trigger: CCCCCAATGCATGTGGAGGCATTGCCCTGATCCTTT...GAGCATCAGAATGAACTCTATGAATACATGTGTAAGTGCCAGACAGCTGAATCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376052.5
ENST00000651448.1
ENST00000651544.1
CDS-3UTR GCA 90 bp GCCATACCAAGCAGTCATATACAGGGCCAGGATCGCTGTATTTCTTCTCAAAAGACCTGCGTTAGGGGATaGTATATCATAGCCACATAC +
Preference number: 4 (lower is better)
Translates to: AIPSSHIQGQDRCISSQKTCVRG*YIIATY
Trigger: GTATGTGGCTATGATATAGCATCCCCTAACGCAGGT...CTTTTGAGAAGAAATACAGCGATCCTGGCCCTGTATATGACTGCTTGGTATGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651448.1
CDS-3UTR GCA 90 bp AGATTTATTGAAGCAGTTATGCTCCAGCAACTGCCACTCATTTGTGCTGGTTCTTCTGAAGAGCGGACCTaGGTTAGGGGATGCTATATC +
Preference number: 4 (lower is better)
Translates to: RFIEAVMLQQLPLICAGSSEERT*VRGCYI
Trigger: GATATAGCATCCCCTAACGCAGGTCCGCTCTTCAGA...AGAACCAGCACAAATGAGTGGCAGTTGCTGGAGCATAACTGCTTCAATAAATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376052.5
ENST00000651448.1
ENST00000651544.1
CDS-3UTR GCA 90 bp CCAAAACCTATCATGCATGTCATAAGCTGCAACCCAACTCGAAGTCCTAGGTGCTTCATGGCTTCGATATaGTCTTTGCTTCACAAGCTG +
Preference number: 4 (lower is better)
Translates to: PKPIMHVISCNPTRSPRCFMASI*SLLHKL
Trigger: CAGCTTGTGAAGCAAAGAGCATATCGAAGCCATGAA...GCACCTAGGACTTCGAGTTGGGTTGCAGCTTATGACATGCATGATAGGTTTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376052.5
ENST00000651448.1
ENST00000651544.1
ENST00000651748.1
CDS-3UTR GCA 90 bp ATTGTCAAAGAGATCAGTCCATTTAGTAGTTTCCCAAAATGTTTCTGCCAGAGAACTCGAAGTCCTAGGTaGTGGCAGGCAGGGCACATC +
Preference number: 4 (lower is better)
Translates to: IVKEISPFSSFPKCFCQRTRSPR*WQAGHI
Trigger: GATGTGCCCTGCCTGCCAGCACCTAGGACTTCGAGT...TCTCTGGCAGAAACATTTTGGGAAACTACTAAATGGACTGATCTCTTTGACAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000651448.1
ENST00000651748.1
CDS-3UTR GCA 90 bp GCTCCAGCAACTGCCACTCATTTGTGCTGGTTCTACTTTTTCCCCTTAATTGAAAGGAATGACGAGAGATaGACGTGCAGTAGCCAAAGA +
Preference number: 4 (lower is better)
Translates to: APATATHLCWFYFFPLIERNDER*TCSSQR
Trigger: TCTTTGGCTACTGCACGTGCATCTCTCGTCATTCCT...TTCAATTAAGGGGAAAAAGTAGAACCAGCACAAATGAGTGGCAGTTGCTGGAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376052.5
CDS-3UTR CCA 90 bp AGATTCAGCTGTCTGGCACTTACACATGTATTCATAGAGTTCATTCTGATGCTCCATGAGCTCCTCCACTaGTCACAATGGAGAGCAGGT +
Preference number: 4 (lower is better)
Translates to: RFSCLALTHVFIEFILMLHELLH*SQWRAG
Trigger: ACCTGCTCTCCATTGTGACCAGTGGAGGAGCTCATG...GAGCATCAGAATGAACTCTATGAATACATGTGTAAGTGCCAGACAGCTGAATCT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376052.5
ENST00000651448.1
ENST00000651544.1
CDS-3UTR CCA 90 bp CAACCTTTCCTACAAAGGGCATCTACGAGGGTGGATTTTTGTTTGTCCATGTCACCGTTCAGGTTCTTCTaGAAAGTGTCCAGCAGCTAT +
Preference number: 4 (lower is better)
Translates to: QPFLQRASTRVDFCLSMSPFRFF*KVSSSY
Trigger: ATAGCTGCTGGACACTTTCCAGAAGAACCTGAACGG...TGACATGGACAAACAAAAATCCACCCTCGTAGATGCCCTTTGTAGGAAAGGTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651448.1
CDS-3UTR CCA 90 bp GCTCCAGCAACTGCCACTCATTTGTGCTGGTTCTACTTTTTCCCCTTAATTGAAACTGGGCGCAGTGTTTaGACCCAGTTCTTCAAAGTT +
Preference number: 4 (lower is better)
Translates to: APATATHLCWFYFFPLIETGRSV*TQFFKV
Trigger: AACTTTGAAGAACTGGGTCCAAACACTGCGCCCAGT...TTCAATTAAGGGGAAAAAGTAGAACCAGCACAAATGAGTGGCAGTTGCTGGAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376052.5
ENST00000651748.1
CDS-3UTR CCA 90 bp CCTATCATGCATGTCATAAGCTGCAACCCAACTCGAAGTCCTAGGTGCTGGCAGAAAGATTCAGCTGTCTaGCACTTACACATGTATTCA +
Preference number: 4 (lower is better)
Translates to: PIMHVISCNPTRSPRCWQKDSAV*HLHMYS
Trigger: TGAATACATGTGTAAGTGCCAGACAGCTGAATCTTT...CTGCCAGCACCTAGGACTTCGAGTTGGGTTGCAGCTTATGACATGCATGATAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376052.5
ENST00000651448.1
ENST00000651544.1
ENST00000651748.1
3UTR CAA 72 bp ACCTTTCCTACAAAGGGCATCTACGAGGGTGGATTTTaGTTTGTCCATGTCACTGTGTCTGAGCACTCCTTT +
Preference number: 4 (lower is better)
Translates to: TFPTKGIYEGGF*FVHVTVSEHSF
Trigger: AAAGGAGTGCTCAGACACAGTGACATGGACAAACAAAAATCCACCCTCGTAGATGCCCTTTGTAGGAAAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651921.1
CDS-3UTR TCA 90 bp AGATTTATTGAAGCAGTTATGCTCCAGCAACTGCCACTCATTTGTGCTGGTTCTCTTAAGCACTCTTCCTaGAAGGCCAACAATCTCACC +
Preference number: 4 (lower is better)
Translates to: RFIEAVMLQQLPLICAGSLKHSS*KANNLT
Trigger: GGTGAGATTGTTGGCCTTTCAGGAAGAGTGCTTAAG...AGAACCAGCACAAATGAGTGGCAGTTGCTGGAGCATAACTGCTTCAATAAATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376052.5
ENST00000651448.1
ENST00000651544.1
CDS-3UTR TCA 90 bp TTCCTTTTCAGCATCCAATTGATGAAGTCGTGCAACGTACAGAGGAAGATAATTGCAAGGGCCACTCTGTaGACAGGGTCCCAGATTTTT +
Preference number: 4 (lower is better)
Translates to: FLFSIQLMKSCNVQRKIIARATL*TGSQIF
Trigger: AAAAATCTGGGACCCTGTTCACAGAGTGGCCCTTGC...AATTATCTTCCTCTGTACGTTGCACGACTTCATCAATTGGATGCTGAAAAGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000651448.1
ENST00000651748.1
CDS-3UTR TCA 90 bp TTAAGAAAACACCATGATGTCAGAGGTCTAGATTTACATGTATTAAGCCACACGGCTACATGTGTCCCATaGGCTCCTCCACTGGTCACA +
Preference number: 4 (lower is better)
Translates to: LRKHHDVRGLDLHVLSHTATCVP*APPLVT
Trigger: TGTGACCAGTGGAGGAGCTCATGGGACACATGTAGC...CGTGTGGCTTAATACATGTAAATCTAGACCTCTGACATCATGGTGTTTTCTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376052.5
ENST00000651448.1
ENST00000651544.1
CDS-3UTR TCA 90 bp CAACATCTCAGCTGTGCCAAAAGAGCCATATTCTTGGGCTTCTTTGTAGTTTCTTTGATGGAAAGAATTTaGGCACCAGGAGCTACCCCA +
Preference number: 4 (lower is better)
Translates to: QHLSCAKRAIFLGFFVVSLMERI*APGATP
Trigger: TGGGGTAGCTCCTGGTGCTCAAATTCTTTCCATCAA...AGAAACTACAAAGAAGCCCAAGAATATGGCTCTTTTGGCACAGCTGAGATGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651448.1
CDS-3UTR TCA 90 bp GAATTTGAGCACCAGGAGCTACCCCATTCCGTTCAGGTTCTTCTGGAAAGTGTCTTGTATCACCAATCTTaGTGGAAAGAATTTGAGCAC +
Preference number: 4 (lower is better)
Translates to: EFEHQELPHSVQVLLESVLYHQS*WKEFEH
Trigger: GTGCTCAAATTCTTTCCATCAAGATTGGTGATACAA...GACACTTTCCAGAAGAACCTGAACGGAATGGGGTAGCTCCTGGTGCTCAAATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651448.1
CDS-3UTR TCA 90 bp GCTCCAGCAACTGCCACTCATTTGTGCTGGTTCTACTTTTTCCCCTTAATTGAAAACACCTATCACACTTaGTGTAGTTCCACCTGGACA +
Preference number: 4 (lower is better)
Translates to: APATATHLCWFYFFPLIENTYHT*CSSTWT
Trigger: TGTCCAGGTGGAACTACATCAAGTGTGATAGGTGTT...TTCAATTAAGGGGAAAAAGTAGAACCAGCACAAATGAGTGGCAGTTGCTGGAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000376052.5
ENST00000651448.1
ENST00000651544.1
CDS-3UTR TCA 90 bp AATGAACAGGGATTACATCAGCTTTCTTTCCTAGTTCAGTCTTTGACAATGTTAGCCAACGCCATGATCTaGAGGTGCAGCCACCTGAAC +
Preference number: 4 (lower is better)
Translates to: NEQGLHQLSFLVQSLTMLANAMI*RCSHLN
Trigger: GTTCAGGTGGCTGCACCTTCAGATCATGGCGTTGGC...TAACATTGTCAAAGACTGAACTAGGAAAGAAAGCTGATGTAATCCCTGTTCATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651448.1
CDS-3UTR TCA 90 bp CATATCATATGTGTATCTTTACAATACCTGATAAAGATTCAGCTGTCTGGCACTGCCAACGCCATGATCTaGAGGTGCAGCCACCTGAAC +
Preference number: 4 (lower is better)
Translates to: HIICVSLQYLIKIQLSGTANAMI*RCSHLN
Trigger: GTTCAGGTGGCTGCACCTTCAGATCATGGCGTTGGC...AGTGCCAGACAGCTGAATCTTTATCAGGTATTGTAAAGATACACATATGATATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376052.5
ENST00000651448.1
ENST00000651544.1
CDS-3UTR TCA 90 bp TTAAGAAAACACCATGATGTCAGAGGTCTAGATTTACATGTATTAAGCCACACGTCAATGCCAACGCCATaGTCTGAAGGTGCAGCCACC +
Preference number: 4 (lower is better)
Translates to: LRKHHDVRGLDLHVLSHTSMPTP*SEGAAT
Trigger: GGTGGCTGCACCTTCAGATCATGGCGTTGGCATTGA...CGTGTGGCTTAATACATGTAAATCTAGACCTCTGACATCATGGTGTTTTCTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376052.5
ENST00000651448.1
ENST00000651544.1
CDS-3UTR TCA 90 bp CTCCATTCTCTTACTGGACTAAACCTATACAAATGGGGACCTGTATGTGTGTGCGTCTACATTGATTCATaGGTTCCAAATGGCTGGGAC +
Preference number: 4 (lower is better)
Translates to: LHSLTGLNLYKWGPVCVCVYIDS*VPNGWD
Trigger: GTCCCAGCCATTTGGAACTCATGAATCAATGTAGAC...GCACACACATACAGGTCCCCATTTGTATAGGTTTAGTCCAGTAAGAGAATGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376052.5
CDS-3UTR TCA 90 bp ATTGTCAAAGAGATCAGTCCATTTAGTAGTTTCCCAAAATGTTTCTGCCAGAGAAGGCAGAGGTTGCAATaGGCCGAGATCACACCACTG +
Preference number: 4 (lower is better)
Translates to: IVKEISPFSSFPKCFCQRRQRLQ*AEITPL
Trigger: CAGTGGTGTGATCTCGGCTCATTGCAACCTCTGCCT...TCTCTGGCAGAAACATTTTGGGAAACTACTAAATGGACTGATCTCTTTGACAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651448.1
CDS-3UTR TCA 90 bp TTAAGAAAACACCATGATGTCAGAGGTCTAGATTTACATGTATTAAGCCACACGGCTATCCACCATCCTTaGCTTTGCTGGTCAGGTGGG +
Preference number: 4 (lower is better)
Translates to: LRKHHDVRGLDLHVLSHTAIHHP*LCWSGG
Trigger: CCCACCTGACCAGCAAAGTCAAGGATGGTGGATAGC...CGTGTGGCTTAATACATGTAAATCTAGACCTCTGACATCATGGTGTTTTCTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651448.1
CDS-3UTR GCA 90 bp ATTTGGCCAGTGAGTTGCTTCTCCGTAACTGTAGTTGACAAGATCACACTTATGTTTTCTACAGGCTTCTaGAAGGGCCACTCTGTGAAC +
Preference number: 4 (lower is better)
Translates to: IWPVSCFSVTVVDKITLMFSTGF*KGHSVN
Trigger: GTTCACAGAGTGGCCCTTGCAGAAGCCTGTAGAAAA...CATAAGTGTGATCTTGTCAACTACAGTTACGGAGAAGCAACTCACTGGCCAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651448.1
CDS-3UTR GCA 90 bp CAAACTTTGCTGACACCTCAGAAGAACACGAACACACTGTCACTTCAGCCCATGTCAACATCTCAGCTGTaGCAAAAGAGCCATATTCTT +
Preference number: 4 (lower is better)
Translates to: QTLLTPQKNTNTLSLQPMSTSQL*QKSHIL
Trigger: AAGAATATGGCTCTTTTGGCACAGCTGAGATGTTGA...CATGGGCTGAAGTGACAGTGTGTTCGTGTTCTTCTGAGGTGTCAGCAAAGTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651448.1
CDS-3UTR GCA 90 bp CTGACTTTTGGCTCTTCTCCTAAGCCACTCTTATTGAGTGTCTTTAGCTGGGCTATTTGGCCAGTGAGTTaGTTCTCCGTAACTGTAGTT +
Preference number: 4 (lower is better)
Translates to: LTFGSSPKPLLLSVFSWAIWPVS*FSVTVV
Trigger: AACTACAGTTACGGAGAAGCAACTCACTGGCCAAAT...AGCCCAGCTAAAGACACTCAATAAGAGTGGCTTAGGAGAAGAGCCAAAAGTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493770.2
CDS-3UTR GCA 90 bp TGTTTATTTGGTGGAGGAATGACGAGAGATGCACGTGCAGTAGCCAAAGATAAAGATCTCGGAGGTAGATaGCACGGTTATTTCCAACAG +
Preference number: 4 (lower is better)
Translates to: CLFGGGMTRDARAVAKDKDLGGR*HGYFQQ
Trigger: CTGTTGGAAATAACCGTGGCATCTACCTCCGAGATC...TTTATCTTTGGCTACTGCACGTGCATCTCTCGTCATTCCTCCACCAAATAAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376052.5
CDS-3UTR GCA 90 bp CAAACTTTGCTGACACCTCAGAAGAACACGAACACACTGTCACTTCAGCCCATGCCCACCAACGAGCAATaGAAAATTCAATTGCTTTTC +
Preference number: 4 (lower is better)
Translates to: QTLLTPQKNTNTLSLQPMPTNEQ*KIQLLF
Trigger: GAAAAGCAATTGAATTTTGCATTGCTCGTTGGTGGG...CATGGGCTGAAGTGACAGTGTGTTCGTGTTCTTCTGAGGTGTCAGCAAAGTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000651448.1
ENST00000651748.1
CDS-3UTR GCA 90 bp TCTTTAAGGCGTTCCAAATCACTGATTTGCTCATGGCGAATCTGTAGTCGAATTGACATCACTGAGACTTaGCCACCAACGAGCAATGCA +
Preference number: 4 (lower is better)
Translates to: SLRRSKSLICSWRICSRIDITET*PPTSNA
Trigger: TGCATTGCTCGTTGGTGGGCAAGTCTCAGTGATGTC...AATTCGACTACAGATTCGCCATGAGCAAATCAGTGATTTGGAACGCCTTAAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651448.1
ENST00000651748.1
CDS-3UTR GCA 90 bp ACACGAACACACTGTCACTTCAGCCCATGTTGCACCCTCAGGAACCTCAATAAAATTAAGGTACCAGAGTaGATATGGTGTACTGTGATC +
Preference number: 4 (lower is better)
Translates to: TRTHCHFSPCCTLRNLNKIKVPE*IWCTVI
Trigger: GATCACAGTACACCATATGCACTCTGGTACCTTAAT...TTTATTGAGGTTCCTGAGGGTGCAACATGGGCTGAAGTGACAGTGTGTTCGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651748.1
CDS-3UTR GCA 90 bp ATTGTCAAAGAGATCAGTCCATTTAGTAGTTTCCCAAAATGTTTCTGCCAGAGAAGACTCGGCAAATGCTaGCTGATGGATCCTGGCTGC +
Preference number: 4 (lower is better)
Translates to: IVKEISPFSSFPKCFCQRRLGKC*LMDPGC
Trigger: GCAGCCAGGATCCATCAGGCAGCATTTGCCGAGTCT...TCTCTGGCAGAAACATTTTGGGAAACTACTAAATGGACTGATCTCTTTGACAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651921.1
CDS-3UTR GCA 90 bp TTGGTGGAGGTATTAAGTAGTAATGAACAGGGATTACATCAGCTTTCTTTCCTAATACTGGGGCTGCCTTaGAGAGATCTGCTGGCAAGG +
Preference number: 4 (lower is better)
Translates to: LVEVLSSNEQGLHQLSFLILGLP*RDLLAR
Trigger: CCTTGCCAGCAGATCTCTGCAAGGCAGCCCCAGTAT...TAGGAAAGAAAGCTGATGTAATCCCTGTTCATTACTACTTAATACCTCCACCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651448.1
CDS-3UTR CCA 90 bp AATGGAAGGTCTTTAAGGCGTTCCAAATCACTGATTTGCTCATGGCGAATCTGTCTCCACTGGTCACAATaGAGAGCAGGTTTCCATCAT +
Preference number: 4 (lower is better)
Translates to: NGRSLRRSKSLICSWRICLHWSQ*RAGFHH
Trigger: ATGATGGAAACCTGCTCTCCATTGTGACCAGTGGAG...ACAGATTCGCCATGAGCAAATCAGTGATTTGGAACGCCTTAAAGACCTTCCATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651448.1
CDS-3UTR CCA 90 bp TGTTTATTTGGTGGAGGAATGACGAGAGATGCACGTGCAGTAGCCAAAGATAAACCGTTCAGGTTCTTCTaGAAAGTGTCCAGCAGCTAT +
Preference number: 4 (lower is better)
Translates to: CLFGGGMTRDARAVAKDKPFRFF*KVSSSY
Trigger: ATAGCTGCTGGACACTTTCCAGAAGAACCTGAACGG...TTTATCTTTGGCTACTGCACGTGCATCTCTCGTCATTCCTCCACCAAATAAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376052.5
CDS-3UTR CCA 90 bp CTCCATTCTCTTACTGGACTAAACCTATACAAATGGGGACCTGTATGTGTGTGCAATTCTCCCAGAATTTaGCCAGTGAGTTGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: LHSLTGLNLYKWGPVCVCNSPRI*PVSCFS
Trigger: GGAGAAGCAACTCACTGGCCAAATTCTGGGAGAATT...GCACACACATACAGGTCCCCATTTGTATAGGTTTAGTCCAGTAAGAGAATGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376052.5
CDS-3UTR CCA 90 bp CAACCTTTCCTACAAAGGGCATCTACGAGGGTGGATTTTTGTTTGTCCATGTCACTTCTCTTAAGCCCCTaGGATCCACACGTATGTTTA +
Preference number: 4 (lower is better)
Translates to: QPFLQRASTRVDFCLSMSLLLSP*DPHVCL
Trigger: TAAACATACGTGTGGATCCCAGGGGCTTAAGAGAAG...TGACATGGACAAACAAAAATCCACCCTCGTAGATGCCCTTTGTAGGAAAGGTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651448.1
CDS-3UTR CCA 90 bp CCAAAACCTATCATGCATGTCATAAGCTGCAACCCAACTCGAAGTCCTAGGTGCGGAAGTAACAAAGAATaGCTGGTTATATTTGGGTGG +
Preference number: 4 (lower is better)
Translates to: PKPIMHVISCNPTRSPRCGSNKE*LVIFGW
Trigger: CCACCCAAATATAACCAGCCATTCTTTGTTACTTCC...GCACCTAGGACTTCGAGTTGGGTTGCAGCTTATGACATGCATGATAGGTTTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376052.5
ENST00000651448.1
ENST00000651544.1
ENST00000651748.1
CDS-3UTR CCA 90 bp TGTTTATTTGGTGGAGGAATGACGAGAGATGCACGTGCAGTAGCCAAAGATAAATTCCTTCTGCATCAGTaGAAATGGCTCCGTCTTGAG +
Preference number: 4 (lower is better)
Translates to: CLFGGGMTRDARAVAKDKFLLHQ*KWLRLE
Trigger: CTCAAGACGGAGCCATTTCCACTGATGCAGAAGGAA...TTTATCTTTGGCTACTGCACGTGCATCTCTCGTCATTCCTCCACCAAATAAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376052.5
CDS-3UTR CCA 90 bp CCAAAACCTATCATGCATGTCATAAGCTGCAACCCAACTCGAAGTCCTAGGTGCGTAAAAGATGCACAATaGGTCCATCCAAGTAACTTC +
Preference number: 4 (lower is better)
Translates to: PKPIMHVISCNPTRSPRCVKDAQ*VHPSNF
Trigger: GAAGTTACTTGGATGGACCCATTGTGCATCTTTTAC...GCACCTAGGACTTCGAGTTGGGTTGCAGCTTATGACATGCATGATAGGTTTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376052.5
ENST00000651448.1
ENST00000651544.1
ENST00000651748.1
CDS-3UTR CCA 90 bp AGTTATGCAGGGAGCCAGATCTTCGTATTTCAAGGAGGACTGAACATCAAAGCGGTACCAGAGTGCATATaGTGTACTGTGATCTTGGTT +
Preference number: 4 (lower is better)
Translates to: SYAGSQIFVFQGGLNIKAVPECI*CTVILV
Trigger: AACCAAGATCACAGTACACCATATGCACTCTGGTAC...CGCTTTGATGTTCAGTCCTCCTTGAAATACGAAGATCTGGCTCCCTGCATAACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651748.1
CDS-3UTR CCA 90 bp CCTATCATGCATGTCATAAGCTGCAACCCAACTCGAAGTCCTAGGTGCTGGCAGTCTCCATTCTCTTACTaGACTAAACCTATACAAATG +
Preference number: 4 (lower is better)
Translates to: PIMHVISCNPTRSPRCWQSPFSY*TKPIQM
Trigger: CATTTGTATAGGTTTAGTCCAGTAAGAGAATGGAGA...CTGCCAGCACCTAGGACTTCGAGTTGGGTTGCAGCTTATGACATGCATGATAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376052.5
CDS-3UTR CCA 90 bp CTGACTTTTGGCTCTTCTCCTAAGCCACTCTTATTGAGTGTCTTTAGCTGGGCTTGGATATCCACGGCCTaGTTGTTTTCAATGACACTT +
Preference number: 4 (lower is better)
Translates to: LTFGSSPKPLLLSVFSWAWISTA*LFSMTL
Trigger: AAGTGTCATTGAAAACAACCAGGCCGTGGATATCCA...AGCCCAGCTAAAGACACTCAATAAGAGTGGCTTAGGAGAAGAGCCAAAAGTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493770.2
3UTR CAA 72 bp TTTGCTTCACAAGCTGGACTGCATGTAGAACAAACTTaGCTGACACCTCAGAAGAACACGAACACACTGTCA +
Preference number: 4 (lower is better)
Translates to: FASQAGLHVEQT*LTPQKNTNTLS
Trigger: TGACAGTGTGTTCGTGTTCTTCTGAGGTGTCAGCAAAGTTTGTTCTACATGCAGTCCAGCTTGTGAAGCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651448.1
ENST00000651748.1
3UTR CAA 72 bp GGTTATTTGGCAAAACATCTCTTGATCCTAAAGGTTTaGTTTTTGCACTCACTGGGCGCAGTGTTTGGACCC +
Preference number: 4 (lower is better)
Translates to: GYLAKHLLILKV*FLHSLGAVFGP
Trigger: GGGTCCAAACACTGCGCCCAGTGAGTGCAAAAACAAAACCTTTAGGATCAAGAGATGTTTTGCCAAATAACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651748.1
CDS-3UTR TCA 90 bp CAAACTTTGCTGACACCTCAGAAGAACACGAACACACTGTCACTTCAGCCCATGAAATGCCTTCGAATTTaGCCAGGTTTAAAGTGTACA +
Preference number: 4 (lower is better)
Translates to: QTLLTPQKNTNTLSLQPMKCLRI*PGLKCT
Trigger: TGTACACTTTAAACCTGGTCAAATTCGAAGGCATTT...CATGGGCTGAAGTGACAGTGTGTTCGTGTTCTTCTGAGGTGTCAGCAAAGTTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651448.1
ENST00000651748.1
CDS-3UTR TCA 90 bp ACACGAACACACTGTCACTTCAGCCCATGTTGCACCCTCAGGAACCTCAATAAAAAATGCCTTCGAATTTaGCCAGGTTTAAAGTGTACA +
Preference number: 4 (lower is better)
Translates to: TRTHCHFSPCCTLRNLNKKCLRI*PGLKCT
Trigger: TGTACACTTTAAACCTGGTCAAATTCGAAGGCATTT...TTTATTGAGGTTCCTGAGGGTGCAACATGGGCTGAAGTGACAGTGTGTTCGTGT
43% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000651448.1
ENST00000651748.1
CDS-3UTR TCA 90 bp AGATTCAGCTGTCTGGCACTTACACATGTATTCATAGAGTTCATTCTGATGCTCGGCGTTCCAAATCACTaGTTTGCTCATGGCGAATCT +
Preference number: 4 (lower is better)
Translates to: RFSCLALTHVFIEFILMLGVPNH*FAHGES
Trigger: AGATTCGCCATGAGCAAATCAGTGATTTGGAACGCC...GAGCATCAGAATGAACTCTATGAATACATGTGTAAGTGCCAGACAGCTGAATCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376052.5
ENST00000651448.1
ENST00000651544.1
ENST00000651748.1
CDS-3UTR TCA 90 bp CCAAAACCTATCATGCATGTCATAAGCTGCAACCCAACTCGAAGTCCTAGGTGCAAGATGAAGATTTATTaGAGCAGTTATGCTCCAGCA +
Preference number: 4 (lower is better)
Translates to: PKPIMHVISCNPTRSPRCKMKIY*SSYAPA
Trigger: TGCTGGAGCATAACTGCTTCAATAAATCTTCATCTT...GCACCTAGGACTTCGAGTTGGGTTGCAGCTTATGACATGCATGATAGGTTTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376052.5
ENST00000651448.1
ENST00000651544.1
ENST00000651748.1
CDS-3UTR TCA 90 bp ATTGTCAAAGAGATCAGTCCATTTAGTAGTTTCCCAAAATGTTTCTGCCAGAGACCATGTCACTGTGTCTaGGCACTCCTTTCATCCGTC +
Preference number: 4 (lower is better)
Translates to: IVKEISPFSSFPKCFCQRPCHCV*ALLSSV
Trigger: GACGGATGAAAGGAGTGCTCAGACACAGTGACATGG...TCTCTGGCAGAAACATTTTGGGAAACTACTAAATGGACTGATCTCTTTGACAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651921.1
CDS-3UTR TCA 90 bp ACACATCAAGCTTTGCTGACTTTTGGCTCTTCTCCTAAGCCACTCTTATTGAGTCACATCAAGCTTTGCTaGCTTTTGGCTCTTCTCCTA +
Preference number: 4 (lower is better)
Translates to: THQALLTFGSSPKPLLLSHIKLC*LLALLL
Trigger: TAGGAGAAGAGCCAAAAGTCAGCAAAGCTTGATGTG...ACTCAATAAGAGTGGCTTAGGAGAAGAGCCAAAAGTCAGCAAAGCTTGATGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493770.2
CDS-3UTR TCA 90 bp TCTTTAAGGCGTTCCAAATCACTGATTTGCTCATGGCGAATCTGTAGTCGAATTCCTTGTGCAAACTGTTaGCAGTACTGTGTTGTGTGC +
Preference number: 4 (lower is better)
Translates to: SLRRSKSLICSWRICSRIPCANC*QYCVVC
Trigger: GCACACAACACAGTACTGTCAACAGTTTGCACAAGG...AATTCGACTACAGATTCGCCATGAGCAAATCAGTGATTTGGAACGCCTTAAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651448.1
CDS-3UTR TCA 90 bp GTATTTCAAGGAGGACTGAACATCAAAGCGGTTGATTCCTTCCGATGCATGAATTTGCAAGACAGGTTCTaGTTTGTACCCCTTGTGCAA +
Preference number: 4 (lower is better)
Translates to: VFQGGLNIKAVDSFRCMNLQDRF*FVPLVQ
Trigger: TTGCACAAGGGGTACAAATCAGAACCTGTCTTGCAA...ATTCATGCATCGGAAGGAATCAACCGCTTTGATGTTCAGTCCTCCTTGAAATAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651448.1
CDS-3UTR GCA 90 bp ACACGAACACACTGTCACTTCAGCCCATGTTGCACCCTCAGGAACCTCAATAAATATCCTTTCCTTGAGTaGCTTAGGATAGAAGTCATA +
Preference number: 4 (lower is better)
Translates to: TRTHCHFSPCCTLRNLNKYPFLE*LRIEVI
Trigger: TATGACTTCTATCCTAAGGCACTCAAGGAAAGGATA...TTTATTGAGGTTCCTGAGGGTGCAACATGGGCTGAAGTGACAGTGTGTTCGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651448.1
ENST00000651748.1
CDS-3UTR GCA 90 bp CGAACACACTGTCACTTCAGCCCATGTTGCACCCTCAGGAACCTCAATAAAATGTATCCTTTCCTTGAGTaGCTTAGGATAGAAGTCATA +
Preference number: 4 (lower is better)
Translates to: RTHCHFSPCCTLRNLNKMYPFLE*LRIEVI
Trigger: TATGACTTCTATCCTAAGGCACTCAAGGAAAGGATA...CATTTTATTGAGGTTCCTGAGGGTGCAACATGGGCTGAAGTGACAGTGTGTTCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000651448.1
ENST00000651748.1
CDS-3UTR GCA 90 bp TTTTCATTCGTTCCTTTTCAGCATCCAATTGATGAAGTCGTGCAACGTACAGAGTTTTCTACAGGCTTCTaGAAGGGCCACTCTGTGAAC +
Preference number: 4 (lower is better)
Translates to: FSFVPFQHPIDEVVQRTEFSTGF*KGHSVN
Trigger: GTTCACAGAGTGGCCCTTGCAGAAGCCTGTAGAAAA...CTCTGTACGTTGCACGACTTCATCAATTGGATGCTGAAAAGGAACGAATGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000651448.1
ENST00000651748.1
CDS-3UTR GCA 90 bp AGATTCAGCTGTCTGGCACTTACACATGTATTCATAGAGTTCATTCTGATGCTCGATCTCGGAGGTAGATaGCACGGTTATTTCCAACAG +
Preference number: 4 (lower is better)
Translates to: RFSCLALTHVFIEFILMLDLGGR*HGYFQQ
Trigger: CTGTTGGAAATAACCGTGGCATCTACCTCCGAGATC...GAGCATCAGAATGAACTCTATGAATACATGTGTAAGTGCCAGACAGCTGAATCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376052.5
ENST00000651448.1
ENST00000651544.1
CDS-3UTR GCA 90 bp GCTCCAGCAACTGCCACTCATTTGTGCTGGTTCTACTTTTTCCCCTTAATTGAAGAAATACAGGTTCAATaGCAACGCCATGATCTGAAG +
Preference number: 4 (lower is better)
Translates to: APATATHLCWFYFFPLIEEIQVQ*QRHDLK
Trigger: CTTCAGATCATGGCGTTGGCATTGAACCTGTATTTC...TTCAATTAAGGGGAAAAAGTAGAACCAGCACAAATGAGTGGCAGTTGCTGGAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376052.5
ENST00000651448.1
ENST00000651544.1
CDS-3UTR GCA 90 bp TGCACCCTCAGGAACCTCAATAAAATGCCTTCGAATTTGACCAGGTTTAAAGTGCTTCGATATGCTCTTTaGTTCACAAGCTGGACTGCA +
Preference number: 4 (lower is better)
Translates to: CTLRNLNKMPSNLTRFKVLRYAL*FTSWTA
Trigger: TGCAGTCCAGCTTGTGAAGCAAAGAGCATATCGAAG...CACTTTAAACCTGGTCAAATTCGAAGGCATTTTATTGAGGTTCCTGAGGGTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000651448.1
ENST00000651748.1
CDS-3UTR GCA 90 bp AGCCAGATCTTCGTATTTCAAGGAGGACTGAACATCAAAGCGGTTGATTCCTTCTTCATGGCTTCGATATaGTCTTTGCTTCACAAGCTG +
Preference number: 4 (lower is better)
Translates to: SQIFVFQGGLNIKAVDSFFMASI*SLLHKL
Trigger: CAGCTTGTGAAGCAAAGAGCATATCGAAGCCATGAA...GAAGGAATCAACCGCTTTGATGTTCAGTCCTCCTTGAAATACGAAGATCTGGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651448.1
ENST00000651748.1
CDS-3UTR GCA 90 bp CAGGTGAAAGTCCATGAGTGTGTGAGAGAGAACATGCATGTAGCTTTCATGGATATAGCATCCAGGTCCTaGCCCTTTAGGTATTTTATC +
Preference number: 4 (lower is better)
Translates to: QVKVHECVRENMHVAFMDIASRS*PFRYFI
Trigger: GATAAAATACCTAAAGGGGCAGGACCTGGATGCTAT...ATCCATGAAAGCTACATGCATGTTCTCTCTCACACACTCATGGACTTTCACCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376052.5
CDS-3UTR GCA 90 bp CAACCTTTCCTACAAAGGGCATCTACGAGGGTGGATTTTTGTTTGTCCATGTCAATAGCATCCAGGTCCTaGCCCTTTAGGTATTTTATC +
Preference number: 4 (lower is better)
Translates to: QPFLQRASTRVDFCLSMSIASRS*PFRYFI
Trigger: GATAAAATACCTAAAGGGGCAGGACCTGGATGCTAT...TGACATGGACAAACAAAAATCCACCCTCGTAGATGCCCTTTGTAGGAAAGGTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000651448.1
ENST00000651748.1
ENST00000651921.1
CDS-3UTR GCA 90 bp AGTTATGCAGGGAGCCAGATCTTCGTATTTCAAGGAGGACTGAACATCAAAGCGCAATTGATGAAGTCGTaGAACGTACAGAGGAAGATA +
Preference number: 4 (lower is better)
Translates to: SYAGSQIFVFQGGLNIKAQLMKS*NVQRKI
Trigger: TATCTTCCTCTGTACGTTGCACGACTTCATCAATTG...CGCTTTGATGTTCAGTCCTCCTTGAAATACGAAGATCTGGCTCCCTGCATAACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651448.1
ENST00000651748.1
CDS-3UTR GCA 90 bp TCTATGAGAAACAATAAATGGAAGGTCTTTAAGGCGTTCCAAATCACTGATTTGCAGGGCACATCCCCGTaGCAGCAATGTGAGGCATTA +
Preference number: 4 (lower is better)
Translates to: SMRNNKWKVFKAFQITDLQGTSP*QQCEAL
Trigger: TAATGCCTCACATTGCTGGCACGGGGATGTGCCCTG...CAAATCAGTGATTTGGAACGCCTTAAAGACCTTCCATTTATTGTTTCTCATAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000651448.1
ENST00000651748.1
CDS-3UTR GCA 90 bp ATTGTCAAAGAGATCAGTCCATTTAGTAGTTTCCCAAAATGTTTCTGCCAGAGATCCTTGTCGTTTTGCTaGAGACTGCCCCTGGGAGTT +
Preference number: 4 (lower is better)
Translates to: IVKEISPFSSFPKCFCQRSLSFC*RLPLGV
Trigger: AACTCCCAGGGGCAGTCTGCAGCAAAACGACAAGGA...TCTCTGGCAGAAACATTTTGGGAAACTACTAAATGGACTGATCTCTTTGACAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000651921.1
CDS-3UTR CCA 90 bp AGGTCTAGATTTACATGTATTAAGCCACACGTCAGTGAATTCTCTGATAAATACAGCAATGGCTCCTCCTaGCGCACTGATACTCACACC +
Preference number: 4 (lower is better)
Translates to: RSRFTCIKPHVSEFSDKYSNGSS*RTDTHT
Trigger: GGTGTGAGTATCAGTGCGCCAGGAGGAGCCATTGCT...GTATTTATCAGAGAATTCACTGACGTGTGGCTTAATACATGTAAATCTAGACCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376052.5
ENST00000651448.1
ENST00000651544.1
CDS-3UTR CCA 90 bp TTTTCATTCGTTCCTTTTCAGCATCCAATTGATGAAGTCGTGCAACGTACAGAGACTGGGCGCAGTGTTTaGACCCAGTTCTTCAAAGTT +
Preference number: 4 (lower is better)
Translates to: FSFVPFQHPIDEVVQRTETGRSV*TQFFKV
Trigger: AACTTTGAAGAACTGGGTCCAAACACTGCGCCCAGT...CTCTGTACGTTGCACGACTTCATCAATTGGATGCTGAAAAGGAACGAATGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651748.1
CDS-3UTR CCA 90 bp TGTTTATTTGGTGGAGGAATGACGAGAGATGCACGTGCAGTAGCCAAAGATAAAGGGCATCTACGAGGGTaGATTTTTGTTTGTCCATGT +
Preference number: 4 (lower is better)
Translates to: CLFGGGMTRDARAVAKDKGHLRG*IFVCPC
Trigger: ACATGGACAAACAAAAATCCACCCTCGTAGATGCCC...TTTATCTTTGGCTACTGCACGTGCATCTCTCGTCATTCCTCCACCAAATAAACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376052.5
CDS-3UTR CCA 90 bp CCAAAACCTATCATGCATGTCATAAGCTGCAACCCAACTCGAAGTCCTAGGTGCAAAGATTCAGCTGTCTaGCACTTACACATGTATTCA +
Preference number: 4 (lower is better)
Translates to: PKPIMHVISCNPTRSPRCKDSAV*HLHMYS
Trigger: TGAATACATGTGTAAGTGCCAGACAGCTGAATCTTT...GCACCTAGGACTTCGAGTTGGGTTGCAGCTTATGACATGCATGATAGGTTTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376052.5
ENST00000651448.1
ENST00000651544.1
ENST00000651748.1
CDS-3UTR CCA 90 bp CTCTTGATCCTAAAGGTTTTGTTTTTGCACTCACTGGGCGCAGTGTTTGGACCCAAAGATTCAGCTGTCTaGCACTTACACATGTATTCA +
Preference number: 4 (lower is better)
Translates to: LLILKVLFLHSLGAVFGPKDSAV*HLHMYS
Trigger: TGAATACATGTGTAAGTGCCAGACAGCTGAATCTTT...GGGTCCAAACACTGCGCCCAGTGAGTGCAAAAACAAAACCTTTAGGATCAAGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651748.1
CDS-3UTR CCA 90 bp GCTCCAGCAACTGCCACTCATTTGTGCTGGTTCTACTTTTTCCCCTTAATTGAACTAAACCTATACAAATaGGGACCTGTATGTGTGTGC +
Preference number: 4 (lower is better)
Translates to: APATATHLCWFYFFPLIELNLYK*GPVCVC
Trigger: GCACACACATACAGGTCCCCATTTGTATAGGTTTAG...TTCAATTAAGGGGAAAAAGTAGAACCAGCACAAATGAGTGGCAGTTGCTGGAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376052.5
CDS-3UTR TCA 90 bp GTATTTCAAGGAGGACTGAACATCAAAGCGGTTGATTCCTTCCGATGCATGAATTTCATTCTGATGCTCTaGACCTCAAGAGGATGTGAA +
Preference number: 4 (lower is better)
Translates to: VFQGGLNIKAVDSFRCMNFILML*TSRGCE
Trigger: TTCACATCCTCTTGAGGTTCAGAGCATCAGAATGAA...ATTCATGCATCGGAAGGAATCAACCGCTTTGATGTTCAGTCCTCCTTGAAATAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651448.1
ENST00000651748.1
CDS-3UTR TCA 90 bp TGTTTATTTGGTGGAGGAATGACGAGAGATGCACGTGCAGTAGCCAAAGATAAATCATCCTACCTTTACTaGGCTTCTCCATTCTCTTAC +
Preference number: 4 (lower is better)
Translates to: CLFGGGMTRDARAVAKDKSSYLY*ASPFSY
Trigger: GTAAGAGAATGGAGAAGCTCAGTAAAGGTAGGATGA...TTTATCTTTGGCTACTGCACGTGCATCTCTCGTCATTCCTCCACCAAATAAACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376052.5
CDS-3UTR TCA 90 bp AAAACACATCAAGCTTTGCTGACTTTTGGCTCTTCTCCTAAGCCACTCTTATTGCAAAGCAAAGCTTTCTaGTCCATGTGGATATCCACG +
Preference number: 4 (lower is better)
Translates to: KTHQALLTFGSSPKPLLLQSKAF*SMWIST
Trigger: CGTGGATATCCACATGGATCAGAAAGCTTTGCTTTG...CAATAAGAGTGGCTTAGGAGAAGAGCCAAAAGTCAGCAAAGCTTGATGTGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493770.2
CDS-3UTR GCA 90 bp CAGGTGAAAGTCCATGAGTGTGTGAGAGAGAACATGCATGTAGCTTTCATGGATTCAACATCTCAGCTGTaGCAAAAGAGCCATATTCTT +
Preference number: 4 (lower is better)
Translates to: QVKVHECVRENMHVAFMDSTSQL*QKSHIL
Trigger: AAGAATATGGCTCTTTTGGCACAGCTGAGATGTTGA...ATCCATGAAAGCTACATGCATGTTCTCTCTCACACACTCATGGACTTTCACCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376052.5
CDS-3UTR GCA 90 bp TGTATCTTTACAATACCTGATAAAGATTCAGCTGTCTGGCACTTACACATGTATAAAGGATCAGGGCAATaGCTCCACATGCATTGGGGG +
Preference number: 4 (lower is better)
Translates to: CIFTIPDKDSAVWHLHMYKGSGQ*LHMHWG
Trigger: CCCCCAATGCATGTGGAGGCATTGCCCTGATCCTTT...ATACATGTGTAAGTGCCAGACAGCTGAATCTTTATCAGGTATTGTAAAGATACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376052.5
ENST00000651448.1
ENST00000651544.1
CDS-3UTR GCA 90 bp GCTCCAGCAACTGCCACTCATTTGTGCTGGTTCTACTTTTTCCCCTTAATTGAATTTTGCTGCTATAACTaGAGTGATCGGAACTCTGAA +
Preference number: 4 (lower is better)
Translates to: APATATHLCWFYFFPLIEFCCYN*SDRNSE
Trigger: TTCAGAGTTCCGATCACTGCAGTTATAGCAGCAAAA...TTCAATTAAGGGGAAAAAGTAGAACCAGCACAAATGAGTGGCAGTTGCTGGAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000376052.5
ENST00000651448.1
ENST00000651544.1
CDS-3UTR GCA 90 bp CTCCATTCTCTTACTGGACTAAACCTATACAAATGGGGACCTGTATGTGTGTGCCCCACCAACGAGCAATaGAAAATTCAATTGCTTTTC +
Preference number: 4 (lower is better)
Translates to: LHSLTGLNLYKWGPVCVCPTNEQ*KIQLLF
Trigger: GAAAAGCAATTGAATTTTGCATTGCTCGTTGGTGGG...GCACACACATACAGGTCCCCATTTGTATAGGTTTAGTCCAGTAAGAGAATGGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000376052.5
CDS-3UTR GCA 90 bp GCTCCAGCAACTGCCACTCATTTGTGCTGGTTCTACTTTTTCCCCTTAATTGAACCCACCAACGAGCAATaGAAAATTCAATTGCTTTTC +
Preference number: 4 (lower is better)
Translates to: APATATHLCWFYFFPLIEPTNEQ*KIQLLF
Trigger: GAAAAGCAATTGAATTTTGCATTGCTCGTTGGTGGG...TTCAATTAAGGGGAAAAAGTAGAACCAGCACAAATGAGTGGCAGTTGCTGGAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000376052.5
ENST00000651448.1
ENST00000651544.1
ENST00000651748.1
CDS-3UTR GCA 90 bp CAACCTTTCCTACAAAGGGCATCTACGAGGGTGGATTTTTGTTTGTCCATGTCATCCAAATCACTGATTTaGTCATGGCGAATCTGTAGT +
Preference number: 4 (lower is better)
Translates to: QPFLQRASTRVDFCLSMSSKSLI*SWRICS
Trigger: ACTACAGATTCGCCATGAGCAAATCAGTGATTTGGA...TGACATGGACAAACAAAAATCCACCCTCGTAGATGCCCTTTGTAGGAAAGGTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000651448.1
ENST00000651748.1
CDS-3UTR GCA 90 bp TTCACAAATTCTCCCAGAATTTGGCCAGTGAGTTGCTTCTCCGTAACTGTAGTTATAGCATCCAGGTCCTaGCCCTTTAGGTATTTTATC +
Preference number: 4 (lower is better)
Translates to: FTNSPRIWPVSCFSVTVVIASRS*PFRYFI
Trigger: GATAAAATACCTAAAGGGGCAGGACCTGGATGCTAT...AACTACAGTTACGGAGAAGCAACTCACTGGCCAAATTCTGGGAGAATTTGTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651448.1
CDS-3UTR GCA 90 bp GTATTTCAAGGAGGACTGAACATCAAAGCGGTTGATTCCTTCCGATGCATGAATTTATTGAAGCAGTTATaGTCCAGCAACTGCCACTCA +
Preference number: 4 (lower is better)
Translates to: VFQGGLNIKAVDSFRCMNLLKQL*SSNCHS
Trigger: TGAGTGGCAGTTGCTGGAGCATAACTGCTTCAATAA...ATTCATGCATCGGAAGGAATCAACCGCTTTGATGTTCAGTCCTCCTTGAAATAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651448.1
ENST00000651748.1
CDS-3UTR GCA 90 bp ATTTGCCGCATCAACAATTTCATTAAGTCTTTTCATTCGTTCCTTTTCAGCATCCGTTTTGCTGCAGACTaGCCCTGGGAGTTAGAACGA +
Preference number: 4 (lower is better)
Translates to: ICRINNFIKSFHSFLFSIRFAAD*PWELER
Trigger: TCGTTCTAACTCCCAGGGGCAGTCTGCAGCAAAACG...GATGCTGAAAAGGAACGAATGAAAAGACTTAATGAAATTGTTGATGCGGCAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000651921.1
CDS-3UTR GCA 90 bp TTCACAAATTCTCCCAGAATTTGGCCAGTGAGTTGCTTCTCCGTAACTGTAGTTGATTTGTACCCCTTGTaGAAACTGTTGACAGTACTG +
Preference number: 4 (lower is better)
Translates to: FTNSPRIWPVSCFSVTVVDLYPL*KLLTVL
Trigger: CAGTACTGTCAACAGTTTGCACAAGGGGTACAAATC...AACTACAGTTACGGAGAAGCAACTCACTGGCCAAATTCTGGGAGAATTTGTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651448.1
CDS-3UTR CCA 90 bp TCTATGAGAAACAATAAATGGAAGGTCTTTAAGGCGTTCCAAATCACTGATTTGCATGAGCTCCTCCACTaGTCACAATGGAGAGCAGGT +
Preference number: 4 (lower is better)
Translates to: SMRNNKWKVFKAFQITDLHELLH*SQWRAG
Trigger: ACCTGCTCTCCATTGTGACCAGTGGAGGAGCTCATG...CAAATCAGTGATTTGGAACGCCTTAAAGACCTTCCATTTATTGTTTCTCATAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651448.1
CDS-3UTR CCA 90 bp AAAACACATCAAGCTTTGCTGACTTTTGGCTCTTCTCCTAAGCCACTCTTATTGAATTCTCCCAGAATTTaGCCAGTGAGTTGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: KTHQALLTFGSSPKPLLLNSPRI*PVSCFS
Trigger: GGAGAAGCAACTCACTGGCCAAATTCTGGGAGAATT...CAATAAGAGTGGCTTAGGAGAAGAGCCAAAAGTCAGCAAAGCTTGATGTGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493770.2
CDS-3UTR CCA 90 bp CAACCTTTCCTACAAAGGGCATCTACGAGGGTGGATTTTTGTTTGTCCATGTCATCACTGATTTGCTCATaGCGAATCTGTAGTCGAATT +
Preference number: 4 (lower is better)
Translates to: QPFLQRASTRVDFCLSMSSLICS*RICSRI
Trigger: AATTCGACTACAGATTCGCCATGAGCAAATCAGTGA...TGACATGGACAAACAAAAATCCACCCTCGTAGATGCCCTTTGTAGGAAAGGTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000651448.1
ENST00000651748.1
CDS-3UTR CCA 90 bp GCTCCAGCAACTGCCACTCATTTGTGCTGGTTCTACTTTTTCCCCTTAATTGAATCACTGATTTGCTCATaGCGAATCTGTAGTCGAATT +
Preference number: 4 (lower is better)
Translates to: APATATHLCWFYFFPLIESLICS*RICSRI
Trigger: AATTCGACTACAGATTCGCCATGAGCAAATCAGTGA...TTCAATTAAGGGGAAAAAGTAGAACCAGCACAAATGAGTGGCAGTTGCTGGAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376052.5
ENST00000651448.1
ENST00000651544.1
ENST00000651748.1
CDS-3UTR CCA 90 bp CGAACACACTGTCACTTCAGCCCATGTTGCACCCTCAGGAACCTCAATAAAATGGTAACAAAGAATGGCTaGTTATATTTGGGTGGTAAT +
Preference number: 4 (lower is better)
Translates to: RTHCHFSPCCTLRNLNKMVTKNG*LYLGGN
Trigger: ATTACCACCCAAATATAACCAGCCATTCTTTGTTAC...CATTTTATTGAGGTTCCTGAGGGTGCAACATGGGCTGAAGTGACAGTGTGTTCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000651448.1
ENST00000651748.1
CDS-3UTR CCA 90 bp AGATTCAGCTGTCTGGCACTTACACATGTATTCATAGAGTTCATTCTGATGCTCGGGCATCTACGAGGGTaGATTTTTGTTTGTCCATGT +
Preference number: 4 (lower is better)
Translates to: RFSCLALTHVFIEFILMLGHLRG*IFVCPC
Trigger: ACATGGACAAACAAAAATCCACCCTCGTAGATGCCC...GAGCATCAGAATGAACTCTATGAATACATGTGTAAGTGCCAGACAGCTGAATCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376052.5
ENST00000651448.1
ENST00000651544.1
ENST00000651748.1
CDS-3UTR CCA 90 bp TTCCTTTTCAGCATCCAATTGATGAAGTCGTGCAACGTACAGAGGAAGATAATTTTCCTTCTGCATCAGTaGAAATGGCTCCGTCTTGAG +
Preference number: 4 (lower is better)
Translates to: FLFSIQLMKSCNVQRKIIFLLHQ*KWLRLE
Trigger: CTCAAGACGGAGCCATTTCCACTGATGCAGAAGGAA...AATTATCTTCCTCTGTACGTTGCACGACTTCATCAATTGGATGCTGAAAAGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000651448.1
ENST00000651748.1
ENST00000651921.1
CDS-3UTR CCA 90 bp AGATTTATTGAAGCAGTTATGCTCCAGCAACTGCCACTCATTTGTGCTGGTTCTGTACCAGAGTGCATATaGTGTACTGTGATCTTGGTT +
Preference number: 4 (lower is better)
Translates to: RFIEAVMLQQLPLICAGSVPECI*CTVILV
Trigger: AACCAAGATCACAGTACACCATATGCACTCTGGTAC...AGAACCAGCACAAATGAGTGGCAGTTGCTGGAGCATAACTGCTTCAATAAATCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376052.5
ENST00000651748.1
CDS-3UTR CCA 90 bp AGATTTATTGAAGCAGTTATGCTCCAGCAACTGCCACTCATTTGTGCTGGTTCTTGTCTGTTTATTTGGTaGAGGAATGACGAGAGATGC +
Preference number: 4 (lower is better)
Translates to: RFIEAVMLQQLPLICAGSCLFIW*RNDERC
Trigger: GCATCTCTCGTCATTCCTCCACCAAATAAACAGACA...AGAACCAGCACAAATGAGTGGCAGTTGCTGGAGCATAACTGCTTCAATAAATCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376052.5
3UTR CAA 72 bp CAGATTCATATAATAGTTCACAAAGTAGTGGGCAGCTaGGAGTTACTTCCCCACTCTTGGGTTGATGAAAGT +
Preference number: 4 (lower is better)
Translates to: QIHIIVHKVVGS*ELLPHSWVDES
Trigger: ACTTTCATCAACCCAAGAGTGGGGAAGTAACTCCAAGCTGCCCACTACTTTGTGAACTATTATATGAATCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000651448.1
ENST00000651748.1
3UTR CAA 72 bp CAGGGATTACATCAGCTTTCTTTCCTAGTTCAGTCTTaGACAATGTTAAGGATCCTGCAAGATAGCATCCAG +
Preference number: 4 (lower is better)
Translates to: QGLHQLSFLVQS*TMLRILQDSIQ
Trigger: CTGGATGCTATCTTGCAGGATCCTTAACATTGTCAAAGACTGAACTAGGAAAGAAAGCTGATGTAATCCCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651448.1
ENST00000651748.1
CDS-3UTR TCA 90 bp CTCCATTCTCTTACTGGACTAAACCTATACAAATGGGGACCTGTATGTGTGTGCTTGTATCACCAATCTTaGTGGAAAGAATTTGAGCAC +
Preference number: 4 (lower is better)
Translates to: LHSLTGLNLYKWGPVCVCLYHQS*WKEFEH
Trigger: GTGCTCAAATTCTTTCCATCAAGATTGGTGATACAA...GCACACACATACAGGTCCCCATTTGTATAGGTTTAGTCCAGTAAGAGAATGGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376052.5
CDS-3UTR TCA 90 bp AGATTTATTGAAGCAGTTATGCTCCAGCAACTGCCACTCATTTGTGCTGGTTCTCTCCGTAACTGTAGTTaGCAAGATCACACTTATGAT +
Preference number: 4 (lower is better)
Translates to: RFIEAVMLQQLPLICAGSLRNCS*QDHTYD
Trigger: ATCATAAGTGTGATCTTGTCAACTACAGTTACGGAG...AGAACCAGCACAAATGAGTGGCAGTTGCTGGAGCATAACTGCTTCAATAAATCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376052.5
ENST00000651448.1
ENST00000651544.1
CDS-3UTR TCA 90 bp CTCCATTCTCTTACTGGACTAAACCTATACAAATGGGGACCTGTATGTGTGTGCAAGATGAAGATTTATTaGAGCAGTTATGCTCCAGCA +
Preference number: 4 (lower is better)
Translates to: LHSLTGLNLYKWGPVCVCKMKIY*SSYAPA
Trigger: TGCTGGAGCATAACTGCTTCAATAAATCTTCATCTT...GCACACACATACAGGTCCCCATTTGTATAGGTTTAGTCCAGTAAGAGAATGGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376052.5
CDS-3UTR GCA 90 bp TTAAGAAAACACCATGATGTCAGAGGTCTAGATTTACATGTATTAAGCCACACGTTTTCTACAGGCTTCTaGAAGGGCCACTCTGTGAAC +
Preference number: 4 (lower is better)
Translates to: LRKHHDVRGLDLHVLSHTFSTGF*KGHSVN
Trigger: GTTCACAGAGTGGCCCTTGCAGAAGCCTGTAGAAAA...CGTGTGGCTTAATACATGTAAATCTAGACCTCTGACATCATGGTGTTTTCTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376052.5
ENST00000651448.1
ENST00000651544.1
ENST00000651748.1
CDS-3UTR GCA 90 bp AGATTTATTGAAGCAGTTATGCTCCAGCAACTGCCACTCATTTGTGCTGGTTCTTGCCTGTTTCCATTGTaGTTAGTCTTGTATCACCAA +
Preference number: 4 (lower is better)
Translates to: RFIEAVMLQQLPLICAGSCLFPL*LVLYHQ
Trigger: TTGGTGATACAAGACTAAGCACAATGGAAACAGGCA...AGAACCAGCACAAATGAGTGGCAGTTGCTGGAGCATAACTGCTTCAATAAATCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376052.5
ENST00000651448.1
ENST00000651544.1
CDS-3UTR GCA 90 bp CATATCATATGTGTATCTTTACAATACCTGATAAAGATTCAGCTGTCTGGCACTGGCAATGCCTCCACATaGATTGGGGGAAGACATAGA +
Preference number: 4 (lower is better)
Translates to: HIICVSLQYLIKIQLSGTGNAST*IGGRHR
Trigger: TCTATGTCTTCCCCCAATGCATGTGGAGGCATTGCC...AGTGCCAGACAGCTGAATCTTTATCAGGTATTGTAAAGATACACATATGATATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000376052.5
ENST00000651448.1
ENST00000651544.1
CDS-3UTR GCA 90 bp AGATTCAGCTGTCTGGCACTTACACATGTATTCATAGAGTTCATTCTGATGCTCGAAATACAGGTTCAATaGCAACGCCATGATCTGAAG +
Preference number: 4 (lower is better)
Translates to: RFSCLALTHVFIEFILMLEIQVQ*QRHDLK
Trigger: CTTCAGATCATGGCGTTGGCATTGAACCTGTATTTC...GAGCATCAGAATGAACTCTATGAATACATGTGTAAGTGCCAGACAGCTGAATCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376052.5
ENST00000651448.1
ENST00000651544.1
CDS-3UTR GCA 90 bp AGATTTATTGAAGCAGTTATGCTCCAGCAACTGCCACTCATTTGTGCTGGTTCTCCCACCAACGAGCAATaGAAAATTCAATTGCTTTTC +
Preference number: 4 (lower is better)
Translates to: RFIEAVMLQQLPLICAGSPTNEQ*KIQLLF
Trigger: GAAAAGCAATTGAATTTTGCATTGCTCGTTGGTGGG...AGAACCAGCACAAATGAGTGGCAGTTGCTGGAGCATAACTGCTTCAATAAATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376052.5
ENST00000651448.1
ENST00000651544.1
ENST00000651748.1
CDS-3UTR GCA 90 bp TTATTGTCAAAGAGATCAGTCCATTTAGTAGTTTCCCAAAATGTTTCTGCCAGAGACATCACTGAGACTTaGCCACCAACGAGCAATGCA +
Preference number: 4 (lower is better)
Translates to: LLSKRSVHLVVSQNVSARDITET*PPTSNA
Trigger: TGCATTGCTCGTTGGTGGGCAAGTCTCAGTGATGTC...TCTGGCAGAAACATTTTGGGAAACTACTAAATGGACTGATCTCTTTGACAATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000651448.1
ENST00000651748.1
CDS-3UTR GCA 90 bp TGTTTATTTGGTGGAGGAATGACGAGAGATGCACGTGCAGTAGCCAAAGATAAACAATTGATGAAGTCGTaGAACGTACAGAGGAAGATA +
Preference number: 4 (lower is better)
Translates to: CLFGGGMTRDARAVAKDKQLMKS*NVQRKI
Trigger: TATCTTCCTCTGTACGTTGCACGACTTCATCAATTG...TTTATCTTTGGCTACTGCACGTGCATCTCTCGTCATTCCTCCACCAAATAAACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376052.5
CDS-3UTR GCA 90 bp AGGTCTAGATTTACATGTATTAAGCCACACGTCAGTGAATTCTCTGATAAATACGAACACAGGTCAAGGTaGCCTGCTTTTGTAAGGGGA +
Preference number: 4 (lower is better)
Translates to: RSRFTCIKPHVSEFSDKYEHRSR*PAFVRG
Trigger: TCCCCTTACAAAAGCAGGGCACCTTGACCTGTGTTC...GTATTTATCAGAGAATTCACTGACGTGTGGCTTAATACATGTAAATCTAGACCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651448.1
CDS-3UTR CCA 90 bp AGATTCAGCTGTCTGGCACTTACACATGTATTCATAGAGTTCATTCTGATGCTCAACTGTAGACAGGCATaGACCATTATTTCCAGCACT +
Preference number: 4 (lower is better)
Translates to: RFSCLALTHVFIEFILMLNCRQA*TIISST
Trigger: AGTGCTGGAAATAATGGTCCATGCCTGTCTACAGTT...GAGCATCAGAATGAACTCTATGAATACATGTGTAAGTGCCAGACAGCTGAATCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376052.5
ENST00000651448.1
ENST00000651544.1
CDS-3UTR CCA 90 bp AAAACACATCAAGCTTTGCTGACTTTTGGCTCTTCTCCTAAGCCACTCTTATTGAACTGTAGACAGGCATaGACCATTATTTCCAGCACT +
Preference number: 4 (lower is better)
Translates to: KTHQALLTFGSSPKPLLLNCRQA*TIISST
Trigger: AGTGCTGGAAATAATGGTCCATGCCTGTCTACAGTT...CAATAAGAGTGGCTTAGGAGAAGAGCCAAAAGTCAGCAAAGCTTGATGTGTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493770.2
CDS-3UTR CCA 90 bp CAGGTGAAAGTCCATGAGTGTGTGAGAGAGAACATGCATGTAGCTTTCATGGATATGGCTGGTTATATTTaGGTGGTAATGTCAAATTGC +
Preference number: 4 (lower is better)
Translates to: QVKVHECVRENMHVAFMDMAGYI*VVMSNC
Trigger: GCAATTTGACATTACCACCCAAATATAACCAGCCAT...ATCCATGAAAGCTACATGCATGTTCTCTCTCACACACTCATGGACTTTCACCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376052.5
CDS-3UTR CCA 90 bp TTCCTTTTCAGCATCCAATTGATGAAGTCGTGCAACGTACAGAGGAAGATAATTGGGCATCTACGAGGGTaGATTTTTGTTTGTCCATGT +
Preference number: 4 (lower is better)
Translates to: FLFSIQLMKSCNVQRKIIGHLRG*IFVCPC
Trigger: ACATGGACAAACAAAAATCCACCCTCGTAGATGCCC...AATTATCTTCCTCTGTACGTTGCACGACTTCATCAATTGGATGCTGAAAAGGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000651448.1
ENST00000651748.1
ENST00000651921.1
CDS-3UTR CCA 90 bp TGTTGCAAGACAGGTTCTGATTTGTACCCCTTGTGCAAACTGTTGACAGTACTGAAAGATTCAGCTGTCTaGCACTTACACATGTATTCA +
Preference number: 4 (lower is better)
Translates to: CCKTGSDLYPLCKLLTVLKDSAV*HLHMYS
Trigger: TGAATACATGTGTAAGTGCCAGACAGCTGAATCTTT...CAGTACTGTCAACAGTTTGCACAAGGGGTACAAATCAGAACCTGTCTTGCAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651448.1
CDS-3UTR TCA 90 bp AAAACACATCAAGCTTTGCTGACTTTTGGCTCTTCTCCTAAGCCACTCTTATTGCTCCGTAACTGTAGTTaGCAAGATCACACTTATGAT +
Preference number: 4 (lower is better)
Translates to: KTHQALLTFGSSPKPLLLLRNCS*QDHTYD
Trigger: ATCATAAGTGTGATCTTGTCAACTACAGTTACGGAG...CAATAAGAGTGGCTTAGGAGAAGAGCCAAAAGTCAGCAAAGCTTGATGTGTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493770.2
CDS-3UTR TCA 90 bp GGCTGTTTGATCTATATGAGAAATAACAGCATTTGCCGCATCAACAATTTCATTATTAGCTTTCAGACCTaGAAGGATCAGGGCAATGCC +
Preference number: 4 (lower is better)
Translates to: GCLIYMRNNSICRINNFIISFQT*KDQGNA
Trigger: GGCATTGCCCTGATCCTTTCAGGTCTGAAAGCTAAT...AATGAAATTGTTGATGCGGCAAATGCTGTTATTTCTCATATAGATCAAACAGCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651448.1
CDS-3UTR TCA 90 bp AATGAACAGGGATTACATCAGCTTTCTTTCCTAGTTCAGTCTTTGACAATGTTATGGATAGGCATCGCCTaGACCCATCTGTCTTTTGTT +
Preference number: 4 (lower is better)
Translates to: NEQGLHQLSFLVQSLTMLWIGIA*THLSFV
Trigger: AACAAAAGACAGATGGGTTCAGGCGATGCCTATCCA...TAACATTGTCAAAGACTGAACTAGGAAAGAAAGCTGATGTAATCCCTGTTCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000651448.1
ENST00000651748.1
CDS-3UTR TCA 90 bp TGCAAATGTCAAAACCTTATTGTCAAAGAGATCAGTCCATTTAGTAGTTTCCCATGGATAGGCATCGCCTaGACCCATCTGTCTTTTGTT +
Preference number: 4 (lower is better)
Translates to: CKCQNLIVKEISPFSSFPWIGIA*THLSFV
Trigger: AACAAAAGACAGATGGGTTCAGGCGATGCCTATCCA...TGGGAAACTACTAAATGGACTGATCTCTTTGACAATAAGGTTTTGACATTTGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000651448.1
ENST00000651748.1
CDS-3UTR GCA 90 bp TTAAGAAAACACCATGATGTCAGAGGTCTAGATTTACATGTATTAAGCCACACGGGGATTTGTCCAGCTTaGAGGAATCTTAAGCACTCT +
Preference number: 4 (lower is better)
Translates to: LRKHHDVRGLDLHVLSHTGICPA*RNLKHS
Trigger: AGAGTGCTTAAGATTCCTGCAAGCTGGACAAATCCC...CGTGTGGCTTAATACATGTAAATCTAGACCTCTGACATCATGGTGTTTTCTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376052.5
ENST00000651448.1
ENST00000651544.1
ENST00000651748.1
CDS-3UTR GCA 90 bp TTCCTTTTCAGCATCCAATTGATGAAGTCGTGCAACGTACAGAGGAAGATAATTTGCCAATATGATATTTaGCTGAGGGATTTGTCCAGC +
Preference number: 4 (lower is better)
Translates to: FLFSIQLMKSCNVQRKIICQYDI*LRDLSS
Trigger: GCTGGACAAATCCCTCAGGCAAATATCATATTGGCA...AATTATCTTCCTCTGTACGTTGCACGACTTCATCAATTGGATGCTGAAAAGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000651448.1
ENST00000651748.1
CDS-3UTR GCA 90 bp CATATCATATGTGTATCTTTACAATACCTGATAAAGATTCAGCTGTCTGGCACTTTTTCTACAGGCTTCTaGAAGGGCCACTCTGTGAAC +
Preference number: 4 (lower is better)
Translates to: HIICVSLQYLIKIQLSGTFSTGF*KGHSVN
Trigger: GTTCACAGAGTGGCCCTTGCAGAAGCCTGTAGAAAA...AGTGCCAGACAGCTGAATCTTTATCAGGTATTGTAAAGATACACATATGATATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376052.5
ENST00000651448.1
ENST00000651544.1
ENST00000651748.1
CDS-3UTR GCA 90 bp TGTTTATTTGGTGGAGGAATGACGAGAGATGCACGTGCAGTAGCCAAAGATAAATTCATTTACTTTTGCTaGTATAACTGCAGTGATCGG +
Preference number: 4 (lower is better)
Translates to: CLFGGGMTRDARAVAKDKFIYFC*YNCSDR
Trigger: CCGATCACTGCAGTTATAGCAGCAAAAGTAAATGAA...TTTATCTTTGGCTACTGCACGTGCATCTCTCGTCATTCCTCCACCAAATAAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376052.5
CDS-3UTR CCA 90 bp TCTTTAAGGCGTTCCAAATCACTGATTTGCTCATGGCGAATCTGTAGTCGAATTTCACTGATTTGCTCATaGCGAATCTGTAGTCGAATT +
Preference number: 4 (lower is better)
Translates to: SLRRSKSLICSWRICSRISLICS*RICSRI
Trigger: AATTCGACTACAGATTCGCCATGAGCAAATCAGTGA...AATTCGACTACAGATTCGCCATGAGCAAATCAGTGATTTGGAACGCCTTAAAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651448.1
ENST00000651748.1
CDS-3UTR CCA 90 bp AGCCAGATCTTCGTATTTCAAGGAGGACTGAACATCAAAGCGGTTGATTCCTTCATGAGAAACAATAAATaGAAGGTCTTTAAGGCGTTC +
Preference number: 4 (lower is better)
Translates to: SQIFVFQGGLNIKAVDSFMRNNK*KVFKAF
Trigger: GAACGCCTTAAAGACCTTCCATTTATTGTTTCTCAT...GAAGGAATCAACCGCTTTGATGTTCAGTCCTCCTTGAAATACGAAGATCTGGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651448.1
ENST00000651748.1
CDS-3UTR CCA 90 bp TCAAAGAATACTGATGTGGATAGGCATCGCCTGAACCCATCTGTCTTTTGTTCTATGGCTGGTTATATTTaGGTGGTAATGTCAAATTGC +
Preference number: 4 (lower is better)
Translates to: SKNTDVDRHRLNPSVFCSMAGYI*VVMSNC
Trigger: GCAATTTGACATTACCACCCAAATATAACCAGCCAT...AGAACAAAAGACAGATGGGTTCAGGCGATGCCTATCCACATCAGTATTCTTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000651448.1
ENST00000651748.1
CDS-3UTR CCA 90 bp TGTATCTTTACAATACCTGATAAAGATTCAGCTGTCTGGCACTTACACATGTATTTCCTTCTGCATCAGTaGAAATGGCTCCGTCTTGAG +
Preference number: 4 (lower is better)
Translates to: CIFTIPDKDSAVWHLHMYFLLHQ*KWLRLE
Trigger: CTCAAGACGGAGCCATTTCCACTGATGCAGAAGGAA...ATACATGTGTAAGTGCCAGACAGCTGAATCTTTATCAGGTATTGTAAAGATACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376052.5
ENST00000651448.1
ENST00000651544.1
ENST00000651748.1
CDS-3UTR CCA 90 bp ATTTGCCGCATCAACAATTTCATTAAGTCTTTTCATTCGTTCCTTTTCAGCATCTTCCTTCTGCATCAGTaGAAATGGCTCCGTCTTGAG +
Preference number: 4 (lower is better)
Translates to: ICRINNFIKSFHSFLFSIFLLHQ*KWLRLE
Trigger: CTCAAGACGGAGCCATTTCCACTGATGCAGAAGGAA...GATGCTGAAAAGGAACGAATGAAAAGACTTAATGAAATTGTTGATGCGGCAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000651448.1
ENST00000651748.1
ENST00000651921.1
CDS-3UTR CCA 90 bp AGATTTATTGAAGCAGTTATGCTCCAGCAACTGCCACTCATTTGTGCTGGTTCTTTTTGTCTGTTTATTTaGTGGAGGAATGACGAGAGA +
Preference number: 4 (lower is better)
Translates to: RFIEAVMLQQLPLICAGSFCLFI*WRNDER
Trigger: TCTCTCGTCATTCCTCCACCAAATAAACAGACAAAA...AGAACCAGCACAAATGAGTGGCAGTTGCTGGAGCATAACTGCTTCAATAAATCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376052.5
CDS-3UTR CCA 90 bp TTATTGTCAAAGAGATCAGTCCATTTAGTAGTTTCCCAAAATGTTTCTGCCAGATGCCCAGAGAAGGGCTaGAATGATGCAGAAATCAGA +
Preference number: 4 (lower is better)
Translates to: LLSKRSVHLVVSQNVSARCPEKG*NDAEIR
Trigger: TCTGATTTCTGCATCATTCCAGCCCTTCTCTGGGCA...TCTGGCAGAAACATTTTGGGAAACTACTAAATGGACTGATCTCTTTGACAATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651921.1
3UTR CAA 72 bp GTAATTAATTTCCAACAGTTGATCAGCCGTATAACCTaGGGAAGTCATCCTACCTTTACTGAGCTTCTCCAT +
Preference number: 4 (lower is better)
Translates to: VINFQQLISRIT*GSHPTFTELLH
Trigger: ATGGAGAAGCTCAGTAAAGGTAGGATGACTTCCCAAGGTTATACGGCTGATCAACTGTTGGAAATTAATTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376052.5
3UTR CAA 72 bp ATTCAACATCTCAGCTGTGCCAAAAGAGCCATATTCTaGGGCTTCTTTGTAGTTTCTCAACACGGTAGATTT +
Preference number: 4 (lower is better)
Translates to: IQHLSCAKRAIF*GFFVVSQHGRF
Trigger: AAATCTACCGTGTTGAGAAACTACAAAGAAGCCCAAGAATATGGCTCTTTTGGCACAGCTGAGATGTTGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651448.1
CDS-3UTR TCA 90 bp AGATTCAGCTGTCTGGCACTTACACATGTATTCATAGAGTTCATTCTGATGCTCTTGTATCACCAATCTTaGTGGAAAGAATTTGAGCAC +
Preference number: 4 (lower is better)
Translates to: RFSCLALTHVFIEFILMLLYHQS*WKEFEH
Trigger: GTGCTCAAATTCTTTCCATCAAGATTGGTGATACAA...GAGCATCAGAATGAACTCTATGAATACATGTGTAAGTGCCAGACAGCTGAATCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376052.5
ENST00000651448.1
ENST00000651544.1
CDS-3UTR TCA 90 bp TGTATCTTTACAATACCTGATAAAGATTCAGCTGTCTGGCACTTACACATGTATAACACCTATCACACTTaGTGTAGTTCCACCTGGACA +
Preference number: 4 (lower is better)
Translates to: CIFTIPDKDSAVWHLHMYNTYHT*CSSTWT
Trigger: TGTCCAGGTGGAACTACATCAAGTGTGATAGGTGTT...ATACATGTGTAAGTGCCAGACAGCTGAATCTTTATCAGGTATTGTAAAGATACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376052.5
ENST00000651448.1
ENST00000651544.1
CDS-3UTR TCA 90 bp AGGTCTAGATTTACATGTATTAAGCCACACGTCAGTGAATTCTCTGATAAATACGTCTACATTGATTCATaGGTTCCAAATGGCTGGGAC +
Preference number: 4 (lower is better)
Translates to: RSRFTCIKPHVSEFSDKYVYIDS*VPNGWD
Trigger: GTCCCAGCCATTTGGAACTCATGAATCAATGTAGAC...GTATTTATCAGAGAATTCACTGACGTGTGGCTTAATACATGTAAATCTAGACCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376052.5
ENST00000651448.1
ENST00000651544.1
CDS-3UTR TCA 90 bp TTTTCATTCGTTCCTTTTCAGCATCCAATTGATGAAGTCGTGCAACGTACAGAGAAGATGAAGATTTATTaGAGCAGTTATGCTCCAGCA +
Preference number: 4 (lower is better)
Translates to: FSFVPFQHPIDEVVQRTEKMKIY*SSYAPA
Trigger: TGCTGGAGCATAACTGCTTCAATAAATCTTCATCTT...CTCTGTACGTTGCACGACTTCATCAATTGGATGCTGAAAAGGAACGAATGAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000651448.1
ENST00000651748.1
CDS-3UTR GCA 90 bp TGTATCTTTACAATACCTGATAAAGATTCAGCTGTCTGGCACTTACACATGTATGGGATTTGTCCAGCTTaGAGGAATCTTAAGCACTCT +
Preference number: 4 (lower is better)
Translates to: CIFTIPDKDSAVWHLHMYGICPA*RNLKHS
Trigger: AGAGTGCTTAAGATTCCTGCAAGCTGGACAAATCCC...ATACATGTGTAAGTGCCAGACAGCTGAATCTTTATCAGGTATTGTAAAGATACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376052.5
ENST00000651448.1
ENST00000651544.1
ENST00000651748.1
CDS-3UTR GCA 90 bp ATTTGCCGCATCAACAATTTCATTAAGTCTTTTCATTCGTTCCTTTTCAGCATCCAGACTTCGCCATCATaGCATACCAAGCAGTCATAT +
Preference number: 4 (lower is better)
Translates to: ICRINNFIKSFHSFLFSIQTSPS*HTKQSY
Trigger: ATATGACTGCTTGGTATGGCATGATGGCGAAGTCTG...GATGCTGAAAAGGAACGAATGAAAAGACTTAATGAAATTGTTGATGCGGCAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651448.1
CDS-3UTR GCA 90 bp ATTGTCAAAGAGATCAGTCCATTTAGTAGTTTCCCAAAATGTTTCTGCCAGAGAATTTGGCCAGTGAGTTaGTTCTCCGTAACTGTAGTT +
Preference number: 4 (lower is better)
Translates to: IVKEISPFSSFPKCFCQRIWPVS*FSVTVV
Trigger: AACTACAGTTACGGAGAAGCAACTCACTGGCCAAAT...TCTCTGGCAGAAACATTTTGGGAAACTACTAAATGGACTGATCTCTTTGACAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651448.1
CDS-3UTR GCA 90 bp TTGGTGGAGGTATTAAGTAGTAATGAACAGGGATTACATCAGCTTTCTTTCCTAAGTTCTTCAAAGTTATaGAGGGAGCCAGATCTTCGT +
Preference number: 4 (lower is better)
Translates to: LVEVLSSNEQGLHQLSFLSSSKL*REPDLR
Trigger: ACGAAGATCTGGCTCCCTGCATAACTTTGAAGAACT...TAGGAAAGAAAGCTGATGTAATCCCTGTTCATTACTACTTAATACCTCCACCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651448.1
ENST00000651748.1
CDS-3UTR GCA 90 bp AGGTCTAGATTTACATGTATTAAGCCACACGTCAGTGAATTCTCTGATAAATACATGCATGTCATAAGCTaGAACCCAACTCGAAGTCCT +
Preference number: 4 (lower is better)
Translates to: RSRFTCIKPHVSEFSDKYMHVIS*NPTRSP
Trigger: AGGACTTCGAGTTGGGTTGCAGCTTATGACATGCAT...GTATTTATCAGAGAATTCACTGACGTGTGGCTTAATACATGTAAATCTAGACCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376052.5
ENST00000651448.1
ENST00000651544.1
ENST00000651748.1
CDS-3UTR GCA 90 bp AGACAATCTATGAGAAACAATAAATGGAAGGTCTTTAAGGCGTTCCAAATCACTATGCATGTCATAAGCTaGAACCCAACTCGAAGTCCT +
Preference number: 4 (lower is better)
Translates to: RQSMRNNKWKVFKAFQITMHVIS*NPTRSP
Trigger: AGGACTTCGAGTTGGGTTGCAGCTTATGACATGCAT...AGTGATTTGGAACGCCTTAAAGACCTTCCATTTATTGTTTCTCATAGATTGTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651448.1
ENST00000651748.1
CDS-3UTR CCA 90 bp GGTATTAGACAATCTATGAGAAACAATAAATGGAAGGTCTTTAAGGCGTTCCAAAATTCTCCCAGAATTTaGCCAGTGAGTTGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: GIRQSMRNNKWKVFKAFQNSPRI*PVSCFS
Trigger: GGAGAAGCAACTCACTGGCCAAATTCTGGGAGAATT...TTGGAACGCCTTAAAGACCTTCCATTTATTGTTTCTCATAGATTGTCTAATACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651448.1
CDS-3UTR CCA 90 bp TCAAAGAATACTGATGTGGATAGGCATCGCCTGAACCCATCTGTCTTTTGTTCTCAGTGTTCCTTTCTCTaGAAGAGAACAAAACTTATA +
Preference number: 4 (lower is better)
Translates to: SKNTDVDRHRLNPSVFCSQCSFL*KRTKLI
Trigger: TATAAGTTTTGTTCTCTTCCAGAGAAAGGAACACTG...AGAACAAAAGACAGATGGGTTCAGGCGATGCCTATCCACATCAGTATTCTTTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000651448.1
ENST00000651748.1
CDS-3UTR CCA 90 bp AGACAATCTATGAGAAACAATAAATGGAAGGTCTTTAAGGCGTTCCAAATCACTGGGCATCTACGAGGGTaGATTTTTGTTTGTCCATGT +
Preference number: 4 (lower is better)
Translates to: RQSMRNNKWKVFKAFQITGHLRG*IFVCPC
Trigger: ACATGGACAAACAAAAATCCACCCTCGTAGATGCCC...AGTGATTTGGAACGCCTTAAAGACCTTCCATTTATTGTTTCTCATAGATTGTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000651448.1
ENST00000651748.1
CDS-3UTR CCA 90 bp TGTATCTTTACAATACCTGATAAAGATTCAGCTGTCTGGCACTTACACATGTATTTCATGGATAGACTTTaGACCCTAGCTAGCCCAGAA +
Preference number: 4 (lower is better)
Translates to: CIFTIPDKDSAVWHLHMYFMDRL*TLASPE
Trigger: TTCTGGGCTAGCTAGGGTCCAAAGTCTATCCATGAA...ATACATGTGTAAGTGCCAGACAGCTGAATCTTTATCAGGTATTGTAAAGATACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376052.5
3UTR CAA 72 bp GGTTATTTGGCAAAACATCTCTTGATCCTAAAGGTTTaGTTTTTGCACTCACTGGGCTGTAATGAGGAAACT +
Preference number: 4 (lower is better)
Translates to: GYLAKHLLILKV*FLHSLGCNEET
Trigger: AGTTTCCTCATTACAGCCCAGTGAGTGCAAAAACAAAACCTTTAGGATCAAGAGATGTTTTGCCAAATAACC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651448.1
CDS-3UTR TCA 90 bp TGCAAATGTCAAAACCTTATTGTCAAAGAGATCAGTCCATTTAGTAGTTTCCCAAAATGGCTGGGACACTaGACCCAAGATGAATTTGAA +
Preference number: 4 (lower is better)
Translates to: CKCQNLIVKEISPFSSFPKWLGH*TQDEFE
Trigger: TTCAAATTCATCTTGGGTTCAGTGTCCCAGCCATTT...TGGGAAACTACTAAATGGACTGATCTCTTTGACAATAAGGTTTTGACATTTGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651448.1
CDS-3UTR TCA 90 bp TTCCTTTTCAGCATCCAATTGATGAAGTCGTGCAACGTACAGAGGAAGATAATTAAGATGAAGATTTATTaGAGCAGTTATGCTCCAGCA +
Preference number: 4 (lower is better)
Translates to: FLFSIQLMKSCNVQRKIIKMKIY*SSYAPA
Trigger: TGCTGGAGCATAACTGCTTCAATAAATCTTCATCTT...AATTATCTTCCTCTGTACGTTGCACGACTTCATCAATTGGATGCTGAAAAGGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000651448.1
ENST00000651748.1
CDS-3UTR TCA 90 bp TGTATCTTTACAATACCTGATAAAGATTCAGCTGTCTGGCACTTACACATGTATTTCATTCTGATGCTCTaGACCTCAAGAGGATGTGAA +
Preference number: 4 (lower is better)
Translates to: CIFTIPDKDSAVWHLHMYFILML*TSRGCE
Trigger: TTCACATCCTCTTGAGGTTCAGAGCATCAGAATGAA...ATACATGTGTAAGTGCCAGACAGCTGAATCTTTATCAGGTATTGTAAAGATACA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376052.5
ENST00000651448.1
ENST00000651544.1
ENST00000651748.1
CDS-3UTR TCA 90 bp AGGTCTAGATTTACATGTATTAAGCCACACGTCAGTGAATTCTCTGATAAATACAGAAACAGTTGGGAGTaGCTAAGGATTACTGGTAGT +
Preference number: 4 (lower is better)
Translates to: RSRFTCIKPHVSEFSDKYRNSWE*LRITGS
Trigger: ACTACCAGTAATCCTTAGTCACTCCCAACTGTTTCT...GTATTTATCAGAGAATTCACTGACGTGTGGCTTAATACATGTAAATCTAGACCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376052.5
CDS-3UTR GCA 90 bp CATATCATATGTGTATCTTTACAATACCTGATAAAGATTCAGCTGTCTGGCACTTGCCAATATGATATTTaGCTGAGGGATTTGTCCAGC +
Preference number: 4 (lower is better)
Translates to: HIICVSLQYLIKIQLSGTCQYDI*LRDLSS
Trigger: GCTGGACAAATCCCTCAGGCAAATATCATATTGGCA...AGTGCCAGACAGCTGAATCTTTATCAGGTATTGTAAAGATACACATATGATATG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376052.5
ENST00000651448.1
ENST00000651544.1
ENST00000651748.1
CDS-3UTR GCA 90 bp CATATCATATGTGTATCTTTACAATACCTGATAAAGATTCAGCTGTCTGGCACTATTTGGCCAGTGAGTTaGTTCTCCGTAACTGTAGTT +
Preference number: 4 (lower is better)
Translates to: HIICVSLQYLIKIQLSGTIWPVS*FSVTVV
Trigger: AACTACAGTTACGGAGAAGCAACTCACTGGCCAAAT...AGTGCCAGACAGCTGAATCTTTATCAGGTATTGTAAAGATACACATATGATATG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376052.5
ENST00000651448.1
ENST00000651544.1
CDS-3UTR GCA 90 bp AGGTCTAGATTTACATGTATTAAGCCACACGTCAGTGAATTCTCTGATAAATACTTCATGGCTTCGATATaGTCTTTGCTTCACAAGCTG +
Preference number: 4 (lower is better)
Translates to: RSRFTCIKPHVSEFSDKYFMASI*SLLHKL
Trigger: CAGCTTGTGAAGCAAAGAGCATATCGAAGCCATGAA...GTATTTATCAGAGAATTCACTGACGTGTGGCTTAATACATGTAAATCTAGACCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376052.5
ENST00000651448.1
ENST00000651544.1
ENST00000651748.1
CDS-3UTR GCA 90 bp AGGTCTAGATTTACATGTATTAAGCCACACGTCAGTGAATTCTCTGATAAATACTTATTGAAGCAGTTATaGTCCAGCAACTGCCACTCA +
Preference number: 4 (lower is better)
Translates to: RSRFTCIKPHVSEFSDKYLLKQL*SSNCHS
Trigger: TGAGTGGCAGTTGCTGGAGCATAACTGCTTCAATAA...GTATTTATCAGAGAATTCACTGACGTGTGGCTTAATACATGTAAATCTAGACCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376052.5
ENST00000651448.1
ENST00000651544.1
ENST00000651748.1
CDS-3UTR GCA 90 bp TGCAAATGTCAAAACCTTATTGTCAAAGAGATCAGTCCATTTAGTAGTTTCCCATTATTGAAGCAGTTATaGTCCAGCAACTGCCACTCA +
Preference number: 4 (lower is better)
Translates to: CKCQNLIVKEISPFSSFPLLKQL*SSNCHS
Trigger: TGAGTGGCAGTTGCTGGAGCATAACTGCTTCAATAA...TGGGAAACTACTAAATGGACTGATCTCTTTGACAATAAGGTTTTGACATTTGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000651448.1
ENST00000651748.1
CDS-3UTR CCA 90 bp AGGTCTAGATTTACATGTATTAAGCCACACGTCAGTGAATTCTCTGATAAATACGAGAAGAGCCGTTGTTaGCAACATCAAATTCTTCCT +
Preference number: 4 (lower is better)
Translates to: RSRFTCIKPHVSEFSDKYEKSRC*QHQILP
Trigger: AGGAAGAATTTGATGTTGCCAACAACGGCTCTTCTC...GTATTTATCAGAGAATTCACTGACGTGTGGCTTAATACATGTAAATCTAGACCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376052.5
ENST00000651448.1
ENST00000651544.1
ENST00000651748.1
CDS-3UTR CCA 90 bp GGTATTAGACAATCTATGAGAAACAATAAATGGAAGGTCTTTAAGGCGTTCCAAGAGAAGAGCCGTTGTTaGCAACATCAAATTCTTCCT +
Preference number: 4 (lower is better)
Translates to: GIRQSMRNNKWKVFKAFQEKSRC*QHQILP
Trigger: AGGAAGAATTTGATGTTGCCAACAACGGCTCTTCTC...TTGGAACGCCTTAAAGACCTTCCATTTATTGTTTCTCATAGATTGTCTAATACC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651448.1
ENST00000651748.1
CDS-3UTR CCA 90 bp AGATTCAGCTGTCTGGCACTTACACATGTATTCATAGAGTTCATTCTGATGCTCCAGTGTTCCTTTCTCTaGAAGAGAACAAAACTTATA +
Preference number: 4 (lower is better)
Translates to: RFSCLALTHVFIEFILMLQCSFL*KRTKLI
Trigger: TATAAGTTTTGTTCTCTTCCAGAGAAAGGAACACTG...GAGCATCAGAATGAACTCTATGAATACATGTGTAAGTGCCAGACAGCTGAATCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376052.5
ENST00000651448.1
ENST00000651544.1
ENST00000651748.1
CDS-3UTR CCA 90 bp TCTTTAAGGCGTTCCAAATCACTGATTTGCTCATGGCGAATCTGTAGTCGAATTGTAACAAAGAATGGCTaGTTATATTTGGGTGGTAAT +
Preference number: 4 (lower is better)
Translates to: SLRRSKSLICSWRICSRIVTKNG*LYLGGN
Trigger: ATTACCACCCAAATATAACCAGCCATTCTTTGTTAC...AATTCGACTACAGATTCGCCATGAGCAAATCAGTGATTTGGAACGCCTTAAAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651448.1
ENST00000651748.1
CDS-3UTR CCA 90 bp ATTGTCAAAGAGATCAGTCCATTTAGTAGTTTCCCAAAATGTTTCTGCCAGAGAGGAAGTAACAAAGAATaGCTGGTTATATTTGGGTGG +
Preference number: 4 (lower is better)
Translates to: IVKEISPFSSFPKCFCQRGSNKE*LVIFGW
Trigger: CCACCCAAATATAACCAGCCATTCTTTGTTACTTCC...TCTCTGGCAGAAACATTTTGGGAAACTACTAAATGGACTGATCTCTTTGACAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000651448.1
ENST00000651748.1
ENST00000651921.1
CDS-3UTR TCA 90 bp TGTATCTTTACAATACCTGATAAAGATTCAGCTGTCTGGCACTTACACATGTATATTAGTTTATTTGCTTaGGAAGAGCCGTTGTTGGCA +
Preference number: 4 (lower is better)
Translates to: CIFTIPDKDSAVWHLHMYISLFA*EEPLLA
Trigger: TGCCAACAACGGCTCTTCTCAAGCAAATAAACTAAT...ATACATGTGTAAGTGCCAGACAGCTGAATCTTTATCAGGTATTGTAAAGATACA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376052.5
ENST00000651544.1
CDS-3UTR TCA 90 bp AGGTCTAGATTTACATGTATTAAGCCACACGTCAGTGAATTCTCTGATAAATACCTCCGTAACTGTAGTTaGCAAGATCACACTTATGAT +
Preference number: 4 (lower is better)
Translates to: RSRFTCIKPHVSEFSDKYLRNCS*QDHTYD
Trigger: ATCATAAGTGTGATCTTGTCAACTACAGTTACGGAG...GTATTTATCAGAGAATTCACTGACGTGTGGCTTAATACATGTAAATCTAGACCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376052.5
ENST00000651448.1
ENST00000651544.1
CDS-3UTR TCA 90 bp TGTATCTTTACAATACCTGATAAAGATTCAGCTGTCTGGCACTTACACATGTATCTCCGTAACTGTAGTTaGCAAGATCACACTTATGAT +
Preference number: 4 (lower is better)
Translates to: CIFTIPDKDSAVWHLHMYLRNCS*QDHTYD
Trigger: ATCATAAGTGTGATCTTGTCAACTACAGTTACGGAG...ATACATGTGTAAGTGCCAGACAGCTGAATCTTTATCAGGTATTGTAAAGATACA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376052.5
ENST00000651448.1
ENST00000651544.1
CDS-3UTR TCA 90 bp AGGTCTAGATTTACATGTATTAAGCCACACGTCAGTGAATTCTCTGATAAATACTATTTCAAGGAGGACTaGACATCAAAGCGGTTGATT +
Preference number: 4 (lower is better)
Translates to: RSRFTCIKPHVSEFSDKYYFKED*TSKRLI
Trigger: AATCAACCGCTTTGATGTTCAGTCCTCCTTGAAATA...GTATTTATCAGAGAATTCACTGACGTGTGGCTTAATACATGTAAATCTAGACCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376052.5
ENST00000651448.1
ENST00000651748.1
CDS-3UTR TCA 90 bp TGCAAATGTCAAAACCTTATTGTCAAAGAGATCAGTCCATTTAGTAGTTTCCCATATTTCAAGGAGGACTaGACATCAAAGCGGTTGATT +
Preference number: 4 (lower is better)
Translates to: CKCQNLIVKEISPFSSFPYFKED*TSKRLI
Trigger: AATCAACCGCTTTGATGTTCAGTCCTCCTTGAAATA...TGGGAAACTACTAAATGGACTGATCTCTTTGACAATAAGGTTTTGACATTTGCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000651448.1
ENST00000651748.1
CDS-3UTR TCA 90 bp GGCTGTTTGATCTATATGAGAAATAACAGCATTTGCCGCATCAACAATTTCATTTATTTCAAGGAGGACTaGACATCAAAGCGGTTGATT +
Preference number: 4 (lower is better)
Translates to: GCLIYMRNNSICRINNFIYFKED*TSKRLI
Trigger: AATCAACCGCTTTGATGTTCAGTCCTCCTTGAAATA...AATGAAATTGTTGATGCGGCAAATGCTGTTATTTCTCATATAGATCAAACAGCC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651448.1
ENST00000651748.1
CDS-3UTR GCA 90 bp TTAAGAAAACACCATGATGTCAGAGGTCTAGATTTACATGTATTAAGCCACACGTATCCTTTCCTTGAGTaGCTTAGGATAGAAGTCATA +
Preference number: 4 (lower is better)
Translates to: LRKHHDVRGLDLHVLSHTYPFLE*LRIEVI
Trigger: TATGACTTCTATCCTAAGGCACTCAAGGAAAGGATA...CGTGTGGCTTAATACATGTAAATCTAGACCTCTGACATCATGGTGTTTTCTTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376052.5
ENST00000651448.1
ENST00000651544.1
ENST00000651748.1
CDS-3UTR GCA 90 bp CATATCATATGTGTATCTTTACAATACCTGATAAAGATTCAGCTGTCTGGCACTTCAACATCTCAGCTGTaGCAAAAGAGCCATATTCTT +
Preference number: 4 (lower is better)
Translates to: HIICVSLQYLIKIQLSGTSTSQL*QKSHIL
Trigger: AAGAATATGGCTCTTTTGGCACAGCTGAGATGTTGA...AGTGCCAGACAGCTGAATCTTTATCAGGTATTGTAAAGATACACATATGATATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376052.5
ENST00000651448.1
ENST00000651544.1
CDS-3UTR GCA 90 bp TGTATCTTTACAATACCTGATAAAGATTCAGCTGTCTGGCACTTACACATGTATTGCCTGTTTCCATTGTaGTTAGTCTTGTATCACCAA +
Preference number: 4 (lower is better)
Translates to: CIFTIPDKDSAVWHLHMYCLFPL*LVLYHQ
Trigger: TTGGTGATACAAGACTAAGCACAATGGAAACAGGCA...ATACATGTGTAAGTGCCAGACAGCTGAATCTTTATCAGGTATTGTAAAGATACA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376052.5
ENST00000651448.1
ENST00000651544.1
CDS-3UTR GCA 90 bp AGGTCTAGATTTACATGTATTAAGCCACACGTCAGTGAATTCTCTGATAAATACTCCAAATCACTGATTTaGTCATGGCGAATCTGTAGT +
Preference number: 4 (lower is better)
Translates to: RSRFTCIKPHVSEFSDKYSKSLI*SWRICS
Trigger: ACTACAGATTCGCCATGAGCAAATCAGTGATTTGGA...GTATTTATCAGAGAATTCACTGACGTGTGGCTTAATACATGTAAATCTAGACCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376052.5
ENST00000651448.1
ENST00000651544.1
ENST00000651748.1
CDS-3UTR GCA 90 bp TGTATCTTTACAATACCTGATAAAGATTCAGCTGTCTGGCACTTACACATGTATTCCAAATCACTGATTTaGTCATGGCGAATCTGTAGT +
Preference number: 4 (lower is better)
Translates to: CIFTIPDKDSAVWHLHMYSKSLI*SWRICS
Trigger: ACTACAGATTCGCCATGAGCAAATCAGTGATTTGGA...ATACATGTGTAAGTGCCAGACAGCTGAATCTTTATCAGGTATTGTAAAGATACA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376052.5
ENST00000651448.1
ENST00000651544.1
ENST00000651748.1
CDS-3UTR GCA 90 bp AGACAATCTATGAGAAACAATAAATGGAAGGTCTTTAAGGCGTTCCAAATCACTTCCAAATCACTGATTTaGTCATGGCGAATCTGTAGT +
Preference number: 4 (lower is better)
Translates to: RQSMRNNKWKVFKAFQITSKSLI*SWRICS
Trigger: ACTACAGATTCGCCATGAGCAAATCAGTGATTTGGA...AGTGATTTGGAACGCCTTAAAGACCTTCCATTTATTGTTTCTCATAGATTGTCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651448.1
ENST00000651748.1
CDS-3UTR GCA 90 bp TGTATCTTTACAATACCTGATAAAGATTCAGCTGTCTGGCACTTACACATGTATATTAAGGTACCAGAGTaGATATGGTGTACTGTGATC +
Preference number: 4 (lower is better)
Translates to: CIFTIPDKDSAVWHLHMYIKVPE*IWCTVI
Trigger: GATCACAGTACACCATATGCACTCTGGTACCTTAAT...ATACATGTGTAAGTGCCAGACAGCTGAATCTTTATCAGGTATTGTAAAGATACA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376052.5
ENST00000651748.1
CDS-3UTR CCA 90 bp CATATCATATGTGTATCTTTACAATACCTGATAAAGATTCAGCTGTCTGGCACTTCACTGATTTGCTCATaGCGAATCTGTAGTCGAATT +
Preference number: 4 (lower is better)
Translates to: HIICVSLQYLIKIQLSGTSLICS*RICSRI
Trigger: AATTCGACTACAGATTCGCCATGAGCAAATCAGTGA...AGTGCCAGACAGCTGAATCTTTATCAGGTATTGTAAAGATACACATATGATATG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376052.5
ENST00000651448.1
ENST00000651544.1
ENST00000651748.1
CDS-3UTR CCA 90 bp TTAAGAAAACACCATGATGTCAGAGGTCTAGATTTACATGTATTAAGCCACACGATGGCTGGTTATATTTaGGTGGTAATGTCAAATTGC +
Preference number: 4 (lower is better)
Translates to: LRKHHDVRGLDLHVLSHTMAGYI*VVMSNC
Trigger: GCAATTTGACATTACCACCCAAATATAACCAGCCAT...CGTGTGGCTTAATACATGTAAATCTAGACCTCTGACATCATGGTGTTTTCTTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376052.5
ENST00000651448.1
ENST00000651544.1
ENST00000651748.1
CDS-3UTR CCA 90 bp TTCCTTTTCAGCATCCAATTGATGAAGTCGTGCAACGTACAGAGGAAGATAATTGTAACAAAGAATGGCTaGTTATATTTGGGTGGTAAT +
Preference number: 4 (lower is better)
Translates to: FLFSIQLMKSCNVQRKIIVTKNG*LYLGGN
Trigger: ATTACCACCCAAATATAACCAGCCATTCTTTGTTAC...AATTATCTTCCTCTGTACGTTGCACGACTTCATCAATTGGATGCTGAAAAGGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000651448.1
ENST00000651748.1
ENST00000651921.1
CDS-3UTR CCA 90 bp GGTATTAGACAATCTATGAGAAACAATAAATGGAAGGTCTTTAAGGCGTTCCAAGTAAAAGATGCACAATaGGTCCATCCAAGTAACTTC +
Preference number: 4 (lower is better)
Translates to: GIRQSMRNNKWKVFKAFQVKDAQ*VHPSNF
Trigger: GAAGTTACTTGGATGGACCCATTGTGCATCTTTTAC...TTGGAACGCCTTAAAGACCTTCCATTTATTGTTTCTCATAGATTGTCTAATACC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000651448.1
ENST00000651748.1
CDS-3UTR TCA 90 bp CATATCATATGTGTATCTTTACAATACCTGATAAAGATTCAGCTGTCTGGCACTGCATATGGTGTACTGTaGTCTTGGTTTTGCAAATTT +
Preference number: 4 (lower is better)
Translates to: HIICVSLQYLIKIQLSGTAYGVL*SWFCKF
Trigger: AAATTTGCAAAACCAAGATCACAGTACACCATATGC...AGTGCCAGACAGCTGAATCTTTATCAGGTATTGTAAAGATACACATATGATATG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376052.5
ENST00000651544.1
ENST00000651748.1
CDS-3UTR TCA 90 bp ATTTGCCGCATCAACAATTTCATTAAGTCTTTTCATTCGTTCCTTTTCAGCATCGCATATGGTGTACTGTaGTCTTGGTTTTGCAAATTT +
Preference number: 4 (lower is better)
Translates to: ICRINNFIKSFHSFLFSIAYGVL*SWFCKF
Trigger: AAATTTGCAAAACCAAGATCACAGTACACCATATGC...GATGCTGAAAAGGAACGAATGAAAAGACTTAATGAAATTGTTGATGCGGCAAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000651748.1
CDS-3UTR TCA 90 bp CATATCATATGTGTATCTTTACAATACCTGATAAAGATTCAGCTGTCTGGCACTATCTTTATAACACAGTaGGTATGTGAACACAGGTCA +
Preference number: 4 (lower is better)
Translates to: HIICVSLQYLIKIQLSGTIFITQ*VCEHRS
Trigger: TGACCTGTGTTCACATACTCACTGTGTTATAAAGAT...AGTGCCAGACAGCTGAATCTTTATCAGGTATTGTAAAGATACACATATGATATG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651448.1
CDS-3UTR TCA 90 bp TGTATCTTTACAATACCTGATAAAGATTCAGCTGTCTGGCACTTACACATGTATTTTTTAGTAGTCCTCTaGAGGAAGTTGCTAATGTAC +
Preference number: 4 (lower is better)
Translates to: CIFTIPDKDSAVWHLHMYFLVVL*RKLLMY
Trigger: GTACATTAGCAACTTCCTTCAGAGGACTACTAAAAA...ATACATGTGTAAGTGCCAGACAGCTGAATCTTTATCAGGTATTGTAAAGATACA
36% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000651448.1
CDS-3UTR GCA 90 bp AGGTCTAGATTTACATGTATTAAGCCACACGTCAGTGAATTCTCTGATAAATACTATCCTTTCCTTGAGTaGCTTAGGATAGAAGTCATA +
Preference number: 4 (lower is better)
Translates to: RSRFTCIKPHVSEFSDKYYPFLE*LRIEVI
Trigger: TATGACTTCTATCCTAAGGCACTCAAGGAAAGGATA...GTATTTATCAGAGAATTCACTGACGTGTGGCTTAATACATGTAAATCTAGACCT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376052.5
ENST00000651448.1
ENST00000651544.1
ENST00000651748.1
CDS-3UTR GCA 90 bp AATGAACAGGGATTACATCAGCTTTCTTTCCTAGTTCAGTCTTTGACAATGTTATTCATTTACTTTTGCTaGTATAACTGCAGTGATCGG +
Preference number: 4 (lower is better)
Translates to: NEQGLHQLSFLVQSLTMLFIYFC*YNCSDR
Trigger: CCGATCACTGCAGTTATAGCAGCAAAAGTAAATGAA...TAACATTGTCAAAGACTGAACTAGGAAAGAAAGCTGATGTAATCCCTGTTCATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651448.1
3UTR CAA 72 bp ATGGCTGGTTATATTTGGGTGGTAATGTCAAATTGCTaGATTTCTTCTTCCCTAGAAGTGCAAAACTATGAT +
Preference number: 4 (lower is better)
Translates to: MAGYIWVVMSNC*ISSSLEVQNYD
Trigger: ATCATAGTTTTGCACTTCTAGGGAAGAAGAAATCAAGCAATTTGACATTACCACCCAAATATAACCAGCCAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000651448.1
ENST00000651748.1
3UTR CAA 72 bp TCAGGTAAGGAAGTAACAAAGAATGGCTGGTTATATTaGGGTGGTAATGTCAAATTGCTTGATTTCTTCTTC +
Preference number: 4 (lower is better)
Translates to: SGKEVTKNGWLY*GGNVKLLDFFF
Trigger: GAAGAAGAAATCAAGCAATTTGACATTACCACCCAAATATAACCAGCCATTCTTTGTTACTTCCTTACCTGA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651448.1
ENST00000651748.1
CDS-3UTR CCA 90 bp ATTTGCCGCATCAACAATTTCATTAAGTCTTTTCATTCGTTCCTTTTCAGCATCATGAGAAACAATAAATaGAAGGTCTTTAAGGCGTTC +
Preference number: 4 (lower is better)
Translates to: ICRINNFIKSFHSFLFSIMRNNK*KVFKAF
Trigger: GAACGCCTTAAAGACCTTCCATTTATTGTTTCTCAT...GATGCTGAAAAGGAACGAATGAAAAGACTTAATGAAATTGTTGATGCGGCAAAT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000651448.1
ENST00000651748.1
CDS-3UTR CCA 90 bp CATATCATATGTGTATCTTTACAATACCTGATAAAGATTCAGCTGTCTGGCACTATGAGAAACAATAAATaGAAGGTCTTTAAGGCGTTC +
Preference number: 4 (lower is better)
Translates to: HIICVSLQYLIKIQLSGTMRNNK*KVFKAF
Trigger: GAACGCCTTAAAGACCTTCCATTTATTGTTTCTCAT...AGTGCCAGACAGCTGAATCTTTATCAGGTATTGTAAAGATACACATATGATATG
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376052.5
ENST00000651448.1
ENST00000651544.1
ENST00000651748.1
CDS-3UTR CCA 90 bp TGTATCTTTACAATACCTGATAAAGATTCAGCTGTCTGGCACTTACACATGTATGTAACAAAGAATGGCTaGTTATATTTGGGTGGTAAT +
Preference number: 4 (lower is better)
Translates to: CIFTIPDKDSAVWHLHMYVTKNG*LYLGGN
Trigger: ATTACCACCCAAATATAACCAGCCATTCTTTGTTAC...ATACATGTGTAAGTGCCAGACAGCTGAATCTTTATCAGGTATTGTAAAGATACA
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376052.5
ENST00000651448.1
ENST00000651544.1
ENST00000651748.1
CDS CCA 90 bp GGAGACCGTGAAAAGGGAAGGGCTCCTCAGTCGCAGCGGTGGCCATaGACGCAGGATGGAGGACGAGGAAGCGGCAAACTGCCAGGCTGC +
Preference number: 5 (lower is better)
Translates to: GDREKGRAPQSQRWP*TQDGGRGSGKLPGC
Trigger: GCAGCCTGGCAGTTTGCCGCTTCCTCGTCCTCCATCCTGCGTCCATGGCCACCGCTGCGACTGAGGAGCCCTTCCCTTTTCACGGTCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376052.5
ENST00000651448.1
CDS CCA 90 bp TCGGCAGGAGACCGTGAAAAGGGAAGGGCTCCTCAGTCGCAGCGGTaGCCATGGACGCAGGATGGAGGACGAGGAAGCGGCAAACTGCCA +
Preference number: 5 (lower is better)
Translates to: SAGDREKGRAPQSQR*PWTQDGGRGSGKLP
Trigger: TGGCAGTTTGCCGCTTCCTCGTCCTCCATCCTGCGTCCATGGCCACCGCTGCGACTGAGGAGCCCTTCCCTTTTCACGGTCTCCTGCCGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376052.5
ENST00000651448.1
CDS-3UTR CAA 90 bp CCAGACCCCTGCTGCTCACCAGATGGCAGGGGCCACACTCAGCCCTCCTCCTGGGCTTCGATATGCTCTTaGCTTCACAAGCTGGACTGC +
Preference number: 5 (lower is better)
Translates to: PDPCCSPDGRGHTQPSSWASICS*LHKLDC
Trigger: GCAGTCCAGCTTGTGAAGCAAAGAGCATATCGAAGC...CCAGGAGGAGGGCTGAGTGTGGCCCCTGCCATCTGGTGAGCAGCAGGGGTCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651448.1
CDS-3UTR CAA 90 bp GCAACCCAACTCGAAGTCCTAGGTGCTGGCAGGCAGGGCACATCCCCGTGCCAGGCTTCGATATGCTCTTaGCTTCACAAGCTGGACTGC +
Preference number: 5 (lower is better)
Translates to: ATQLEVLGAGRQGTSPCQASICS*LHKLDC
Trigger: GCAGTCCAGCTTGTGAAGCAAAGAGCATATCGAAGC...CTGGCACGGGGATGTGCCCTGCCTGCCAGCACCTAGGACTTCGAGTTGGGTTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376052.5
ENST00000651448.1
ENST00000651544.1
ENST00000651748.1
CDS-3UTR CAA 90 bp GTGTCTGAGCACTCCTTTCATCCGTCGCTCGGCCAGAGTCTGCAGGGCAGACTCGGAAATGGCTCCGTCTaGAGCCTGGGTGTGAAGAAG +
Preference number: 5 (lower is better)
Translates to: VSEHSFHPSLGQSLQGRLGNGSV*SLGVKK
Trigger: CTTCTTCACACCCAGGCTCAAGACGGAGCCATTTCC...GAGTCTGCCCTGCAGACTCTGGCCGAGCGACGGATGAAAGGAGTGCTCAGACAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651921.1
CDS-3UTR CAA 90 bp ACCCAACTCGAAGTCCTAGGTGCTGGCAGGCAGGGCACATCCCCGTGCCAGCAACTTGATGGAAAGAATTaGAGCACCAGGAGCTACCCC +
Preference number: 5 (lower is better)
Translates to: TQLEVLGAGRQGTSPCQQLDGKN*STRSYP
Trigger: GGGGTAGCTCCTGGTGCTCAAATTCTTTCCATCAAG...TTGCTGGCACGGGGATGTGCCCTGCCTGCCAGCACCTAGGACTTCGAGTTGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376052.5
ENST00000651448.1
ENST00000651544.1
CDS-3UTR CAA 90 bp CCAGACCCCTGCTGCTCACCAGATGGCAGGGGCCACACTCAGCCCTCCTCCTGGTGGGATCAGTCTTCATaGCAATATAAACTGCTAGGG +
Preference number: 5 (lower is better)
Translates to: PDPCCSPDGRGHTQPSSWWDQSS*QYKLLG
Trigger: CCCTAGCAGTTTATATTGCAATGAAGACTGATCCCA...CCAGGAGGAGGGCTGAGTGTGGCCCCTGCCATCTGGTGAGCAGCAGGGGTCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651448.1
CDS CCA 90 bp CGTCCCTCTCAGTGTCCAGTTAGGAACAGAAGCAATGGCTCCTCCTaGCGCACTGATACTCACACCAAGGGCCCCGTCAGCACCAGAATT +
Preference number: 5 (lower is better)
Translates to: RPSQCPVRNRSNGSS*RTDTHTKGPVSTRI
Trigger: AATTCTGGTGCTGACGGGGCCCTTGGTGTGAGTATCAGTGCGCCAGGAGGAGCCATTGCTTCTGTTCCTAACTGGACACTGAGAGGGACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652308.1
CDS-3UTR CAA 90 bp CTAGGTGCTGGCAGGCAGGGCACATCCCCGTGCCAGCAATGTGAGGCATTAAGATCACTTCAGCCCATGTaGCACCCTCAGGAACCTCAA +
Preference number: 5 (lower is better)
Translates to: LGAGRQGTSPCQQCEALRSLQPM*HPQEPQ
Trigger: TTGAGGTTCCTGAGGGTGCAACATGGGCTGAAGTGA...TCTTAATGCCTCACATTGCTGGCACGGGGATGTGCCCTGCCTGCCAGCACCTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376052.5
ENST00000651448.1
ENST00000651544.1
ENST00000651748.1
CDS-3UTR CAA 90 bp ACCCAACTCGAAGTCCTAGGTGCTGGCAGGCAGGGCACATCCCCGTGCCAGCAACTAAAGGTTTTGTTTTaGCACTCACTGGGCGCAGTG +
Preference number: 5 (lower is better)
Translates to: TQLEVLGAGRQGTSPCQQLKVLF*HSLGAV
Trigger: CACTGCGCCCAGTGAGTGCAAAAACAAAACCTTTAG...TTGCTGGCACGGGGATGTGCCCTGCCTGCCAGCACCTAGGACTTCGAGTTGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000376052.5
ENST00000651748.1
CDS-3UTR CAA 90 bp CCAACTCGAAGTCCTAGGTGCTGGCAGGCAGGGCACATCCCCGTGCCAGCAATGCTGTGCCTGTTTCCATaGTGCTTAGTCTTGTATCAC +
Preference number: 5 (lower is better)
Translates to: PTRSPRCWQAGHIPVPAMLCLFP*CLVLYH
Trigger: GTGATACAAGACTAAGCACAATGGAAACAGGCACAG...CATTGCTGGCACGGGGATGTGCCCTGCCTGCCAGCACCTAGGACTTCGAGTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376052.5
ENST00000651448.1
ENST00000651544.1
CDS-3UTR CAA 90 bp GCAACCCAACTCGAAGTCCTAGGTGCTGGCAGGCAGGGCACATCCCCGTGCCAGTTGATCCTAAAGGTTTaGTTTTTGCACTCACTGGGC +
Preference number: 5 (lower is better)
Translates to: ATQLEVLGAGRQGTSPCQLILKV*FLHSLG
Trigger: GCCCAGTGAGTGCAAAAACAAAACCTTTAGGATCAA...CTGGCACGGGGATGTGCCCTGCCTGCCAGCACCTAGGACTTCGAGTTGGGTTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376052.5
ENST00000651448.1
ENST00000651748.1
CDS-3UTR CAA 90 bp ACCCAACTCGAAGTCCTAGGTGCTGGCAGGCAGGGCACATCCCCGTGCCAGCAAATCAGCCGTATAACCTaGGGAAGTCATCCTACCTTT +
Preference number: 5 (lower is better)
Translates to: TQLEVLGAGRQGTSPCQQISRIT*GSHPTF
Trigger: AAAGGTAGGATGACTTCCCAAGGTTATACGGCTGAT...TTGCTGGCACGGGGATGTGCCCTGCCTGCCAGCACCTAGGACTTCGAGTTGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376052.5
CDS-3UTR CAA 90 bp CAACTCGAAGTCCTAGGTGCTGGCAGGCAGGGCACATCCCCGTGCCAGCAATGTCCCTTGTGCAAACTGTaGACAGTACTGTGTTGTGTG +
Preference number: 5 (lower is better)
Translates to: QLEVLGAGRQGTSPCQQCPLCKL*TVLCCV
Trigger: CACACAACACAGTACTGTCAACAGTTTGCACAAGGG...ACATTGCTGGCACGGGGATGTGCCCTGCCTGCCAGCACCTAGGACTTCGAGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651448.1
CDS-3UTR CAA 90 bp CCAACTCGAAGTCCTAGGTGCTGGCAGGCAGGGCACATCCCCGTGCCAGCAATGCTTTTCAGCATCCAATaGATGAAGTCGTGCAACGTA +
Preference number: 5 (lower is better)
Translates to: PTRSPRCWQAGHIPVPAMLFSIQ*MKSCNV
Trigger: TACGTTGCACGACTTCATCAATTGGATGCTGAAAAG...CATTGCTGGCACGGGGATGTGCCCTGCCTGCCAGCACCTAGGACTTCGAGTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376052.5
ENST00000651448.1
ENST00000651544.1
ENST00000651748.1
CDS-3UTR CAA 90 bp CCAACTCGAAGTCCTAGGTGCTGGCAGGCAGGGCACATCCCCGTGCCAGCAATGTGGGATCAGTCTTCATaGCAATATAAACTGCTAGGG +
Preference number: 5 (lower is better)
Translates to: PTRSPRCWQAGHIPVPAMWDQSS*QYKLLG
Trigger: CCCTAGCAGTTTATATTGCAATGAAGACTGATCCCA...CATTGCTGGCACGGGGATGTGCCCTGCCTGCCAGCACCTAGGACTTCGAGTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376052.5
ENST00000651448.1
ENST00000651544.1
ENST00000651748.1
CDS-3UTR CAA 90 bp CCTATCATGCATGTCATAAGCTGCAACCCAACTCGAAGTCCTAGGTGCTGGCAGCCACTGCACTCCAGCTaGAGAAGAGCCGTTGTTGGC +
Preference number: 5 (lower is better)
Translates to: PIMHVISCNPTRSPRCWQPLHSS*RRAVVG
Trigger: GCCAACAACGGCTCTTCTCAAGCTGGAGTGCAGTGG...CTGCCAGCACCTAGGACTTCGAGTTGGGTTGCAGCTTATGACATGCATGATAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651448.1
CDS-3UTR CAA 90 bp CAACTCGAAGTCCTAGGTGCTGGCAGGCAGGGCACATCCCCGTGCCAGCAATGTTTGATCCTAAAGGTTTaGTTTTTGCACTCACTGGGC +
Preference number: 5 (lower is better)
Translates to: QLEVLGAGRQGTSPCQQCLILKV*FLHSLG
Trigger: GCCCAGTGAGTGCAAAAACAAAACCTTTAGGATCAA...ACATTGCTGGCACGGGGATGTGCCCTGCCTGCCAGCACCTAGGACTTCGAGTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376052.5
ENST00000651448.1
ENST00000651748.1
CDS-3UTR CAA 90 bp GCAACCCAACTCGAAGTCCTAGGTGCTGGCAGGCAGGGCACATCCCCGTGCCAGGAACCCATCTGTCTTTaGTTCTGGTCAAAAATAATC +
Preference number: 5 (lower is better)
Translates to: ATQLEVLGAGRQGTSPCQEPICL*FWSKII
Trigger: GATTATTTTTGACCAGAACAAAAGACAGATGGGTTC...CTGGCACGGGGATGTGCCCTGCCTGCCAGCACCTAGGACTTCGAGTTGGGTTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376052.5
ENST00000651448.1
ENST00000651544.1
ENST00000651748.1
CDS-3UTR CAA 90 bp GCAACCCAACTCGAAGTCCTAGGTGCTGGCAGGCAGGGCACATCCCCGTGCCAGGAATCTGTAGTCGAATaGTATAATCTCCTTTCTCCA +
Preference number: 5 (lower is better)
Translates to: ATQLEVLGAGRQGTSPCQESVVE*YNLLSP
Trigger: TGGAGAAAGGAGATTATACAATTCGACTACAGATTC...CTGGCACGGGGATGTGCCCTGCCTGCCAGCACCTAGGACTTCGAGTTGGGTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376052.5
ENST00000651448.1
ENST00000651544.1
ENST00000651748.1
CDS-3UTR CAA 90 bp ACCCAACTCGAAGTCCTAGGTGCTGGCAGGCAGGGCACATCCCCGTGCCAGCAATTCCTAGTTCAGTCTTaGACAATGTTAAGGATCCTG +
Preference number: 5 (lower is better)
Translates to: TQLEVLGAGRQGTSPCQQFLVQS*TMLRIL
Trigger: CAGGATCCTTAACATTGTCAAAGACTGAACTAGGAA...TTGCTGGCACGGGGATGTGCCCTGCCTGCCAGCACCTAGGACTTCGAGTTGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376052.5
ENST00000651448.1
ENST00000651544.1
ENST00000651748.1
CDS-3UTR CAA 90 bp CCAACTCGAAGTCCTAGGTGCTGGCAGGCAGGGCACATCCCCGTGCCAGCAATGCAAGATGAAGATTTATaGAAGCAGTTATGCTCCAGC +
Preference number: 5 (lower is better)
Translates to: PTRSPRCWQAGHIPVPAMQDEDL*KQLCSS
Trigger: GCTGGAGCATAACTGCTTCAATAAATCTTCATCTTG...CATTGCTGGCACGGGGATGTGCCCTGCCTGCCAGCACCTAGGACTTCGAGTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376052.5
ENST00000651448.1
ENST00000651544.1
ENST00000651748.1
CDS-3UTR CAA 90 bp CAACTCGAAGTCCTAGGTGCTGGCAGGCAGGGCACATCCCCGTGCCAGCAATGTGGATGTGAAAATGACTaGCCTGTAATTACCCCAAGA +
Preference number: 5 (lower is better)
Translates to: QLEVLGAGRQGTSPCQQCGCEND*PVITPR
Trigger: TCTTGGGGTAATTACAGGCAAGTCATTTTCACATCC...ACATTGCTGGCACGGGGATGTGCCCTGCCTGCCAGCACCTAGGACTTCGAGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000376052.5
ENST00000651448.1
ENST00000651544.1
ENST00000651748.1
CDS-3UTR CAA 90 bp CCAACTCGAAGTCCTAGGTGCTGGCAGGCAGGGCACATCCCCGTGCCAGCAATGAAAAGAGCCATATTCTaGGGCTTCTTTGTAGTTTCT +
Preference number: 5 (lower is better)
Translates to: PTRSPRCWQAGHIPVPAMKRAIF*GFFVVS
Trigger: AGAAACTACAAAGAAGCCCAAGAATATGGCTCTTTT...CATTGCTGGCACGGGGATGTGCCCTGCCTGCCAGCACCTAGGACTTCGAGTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376052.5
ENST00000651448.1
ENST00000651544.1
CDS-3UTR CAA 90 bp CTAGGTGCTGGCAGGCAGGGCACATCCCCGTGCCAGCAATGTGAGGCATTAAGAGCAAATACTTCTATATaGTCAGCCTTCACTGCAGTG +
Preference number: 5 (lower is better)
Translates to: LGAGRQGTSPCQQCEALRANTSI*SAFTAV
Trigger: CACTGCAGTGAAGGCTGACAATATAGAAGTATTTGC...TCTTAATGCCTCACATTGCTGGCACGGGGATGTGCCCTGCCTGCCAGCACCTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376052.5
ENST00000651448.1
ENST00000651544.1
CDS-3UTR CAA 90 bp ACCCAACTCGAAGTCCTAGGTGCTGGCAGGCAGGGCACATCCCCGTGCCAGCAAAAAATGCCTTCGAATTaGACCAGGTTTAAAGTGTAC +
Preference number: 5 (lower is better)
Translates to: TQLEVLGAGRQGTSPCQQKMPSN*TRFKVY
Trigger: GTACACTTTAAACCTGGTCAAATTCGAAGGCATTTT...TTGCTGGCACGGGGATGTGCCCTGCCTGCCAGCACCTAGGACTTCGAGTTGGGT
52% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000376052.5
ENST00000651448.1
ENST00000651544.1
ENST00000651748.1
CDS-3UTR CAA 90 bp CAACTCGAAGTCCTAGGTGCTGGCAGGCAGGGCACATCCCCGTGCCAGCAATGTCAATGCAAAATTCAATaGCTTTTCCACCTAGGACAG +
Preference number: 5 (lower is better)
Translates to: QLEVLGAGRQGTSPCQQCQCKIQ*LFHLGQ
Trigger: CTGTCCTAGGTGGAAAAGCAATTGAATTTTGCATTG...ACATTGCTGGCACGGGGATGTGCCCTGCCTGCCAGCACCTAGGACTTCGAGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000376052.5
ENST00000651448.1
ENST00000651544.1
ENST00000651748.1
CDS-3UTR CAA 90 bp ACCCAACTCGAAGTCCTAGGTGCTGGCAGGCAGGGCACATCCCCGTGCCAGCAAAAAGTTGACGGTTATTaGGCAAAACATCTCTTGATC +
Preference number: 5 (lower is better)
Translates to: TQLEVLGAGRQGTSPCQQKVDGY*AKHLLI
Trigger: GATCAAGAGATGTTTTGCCAAATAACCGTCAACTTT...TTGCTGGCACGGGGATGTGCCCTGCCTGCCAGCACCTAGGACTTCGAGTTGGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000376052.5
ENST00000651448.1
ENST00000651748.1
CDS-3UTR CAA 90 bp CTAGGTGCTGGCAGGCAGGGCACATCCCCGTGCCAGCAATGTGAGGCATTAAGACTTTTCAGCATCCAATaGATGAAGTCGTGCAACGTA +
Preference number: 5 (lower is better)
Translates to: LGAGRQGTSPCQQCEALRLFSIQ*MKSCNV
Trigger: TACGTTGCACGACTTCATCAATTGGATGCTGAAAAG...TCTTAATGCCTCACATTGCTGGCACGGGGATGTGCCCTGCCTGCCAGCACCTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376052.5
ENST00000651448.1
ENST00000651544.1
ENST00000651748.1
CDS-3UTR CAA 90 bp GGCTCTTCTCCTAAGCCACTCTTATTGAGTGTCTTTAGCTGGGCTGGCAGGGGCCCTAAGCCACTCTTATaGAGTGTCTTTAGCTGGGCT +
Preference number: 5 (lower is better)
Translates to: GSSPKPLLLSVFSWAGRGPKPLL*SVFSWA
Trigger: AGCCCAGCTAAAGACACTCAATAAGAGTGGCTTAGG...GCCCCTGCCAGCCCAGCTAAAGACACTCAATAAGAGTGGCTTAGGAGAAGAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493770.2
CDS-3UTR CAA 90 bp CAACTCGAAGTCCTAGGTGCTGGCAGGCAGGGCACATCCCCGTGCCAGCAATGTAAAATGCCTTCGAATTaGACCAGGTTTAAAGTGTAC +
Preference number: 5 (lower is better)
Translates to: QLEVLGAGRQGTSPCQQCKMPSN*TRFKVY
Trigger: GTACACTTTAAACCTGGTCAAATTCGAAGGCATTTT...ACATTGCTGGCACGGGGATGTGCCCTGCCTGCCAGCACCTAGGACTTCGAGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376052.5
ENST00000651448.1
ENST00000651544.1
ENST00000651748.1
CDS-3UTR CAA 90 bp CAACTCGAAGTCCTAGGTGCTGGCAGGCAGGGCACATCCCCGTGCCAGCAATGTAATGGCTGGTTATATTaGGGTGGTAATGTCAAATTG +
Preference number: 5 (lower is better)
Translates to: QLEVLGAGRQGTSPCQQCNGWLY*GGNVKL
Trigger: CAATTTGACATTACCACCCAAATATAACCAGCCATT...ACATTGCTGGCACGGGGATGTGCCCTGCCTGCCAGCACCTAGGACTTCGAGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376052.5
ENST00000651448.1
ENST00000651544.1
ENST00000651748.1
CDS-3UTR CAA 90 bp CCAAAACCTATCATGCATGTCATAAGCTGCAACCCAACTCGAAGTCCTAGGTGCGGAAATGGCTCCGTCTaGAGCCTGGGTGTGAAGAAG +
Preference number: 5 (lower is better)
Translates to: PKPIMHVISCNPTRSPRCGNGSV*SLGVKK
Trigger: CTTCTTCACACCCAGGCTCAAGACGGAGCCATTTCC...GCACCTAGGACTTCGAGTTGGGTTGCAGCTTATGACATGCATGATAGGTTTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376052.5
ENST00000651448.1
ENST00000651544.1
ENST00000651748.1
CDS-3UTR CAA 90 bp CCAAAACCTATCATGCATGTCATAAGCTGCAACCCAACTCGAAGTCCTAGGTGCCACTGGGCGCAGTGTTaGGACCCAGTTCTTCAAAGT +
Preference number: 5 (lower is better)
Translates to: PKPIMHVISCNPTRSPRCHWAQC*DPVLQS
Trigger: ACTTTGAAGAACTGGGTCCAAACACTGCGCCCAGTG...GCACCTAGGACTTCGAGTTGGGTTGCAGCTTATGACATGCATGATAGGTTTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376052.5
ENST00000651748.1
CDS-3UTR CAA 90 bp CTAGGTGCTGGCAGGCAGGGCACATCCCCGTGCCAGCAATGTGAGGCATTAAGAGAACCCATCTGTCTTTaGTTCTGGTCAAAAATAATC +
Preference number: 5 (lower is better)
Translates to: LGAGRQGTSPCQQCEALREPICL*FWSKII
Trigger: GATTATTTTTGACCAGAACAAAAGACAGATGGGTTC...TCTTAATGCCTCACATTGCTGGCACGGGGATGTGCCCTGCCTGCCAGCACCTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376052.5
ENST00000651448.1
ENST00000651544.1
ENST00000651748.1
CDS-3UTR CAA 90 bp CTAGGTGCTGGCAGGCAGGGCACATCCCCGTGCCAGCAATGTGAGGCATTAAGATACGAGGGTGGATTTTaGTTTGTCCATGTCATTTTT +
Preference number: 5 (lower is better)
Translates to: LGAGRQGTSPCQQCEALRYEGGF*FVHVIF
Trigger: AAAAATGACATGGACAAACAAAAATCCACCCTCGTA...TCTTAATGCCTCACATTGCTGGCACGGGGATGTGCCCTGCCTGCCAGCACCTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376052.5
ENST00000651448.1
ENST00000651544.1
ENST00000651748.1
CDS TCA 90 bp GCTGAGGCAGAAGAATCACTTGAATACAGGAAGCAGAGGTCGAGGTaGGCCGAGATTGTGCCATTGTACTTCAACCTTAAGCACTCTTCC +
Preference number: 5 (lower is better)
Translates to: AEAEESLEYRKQRSR*AEIVPLYFNLKHSS
Trigger: GGAAGAGTGCTTAAGGTTGAAGTACAATGGCACAATCTCGGCTCACCTCGACCTCTGCTTCCTGTATTCAAGTGATTCTTCTGCCTCAGC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490010.1
CDS-3UTR CAA 90 bp CCTATCATGCATGTCATAAGCTGCAACCCAACTCGAAGTCCTAGGTGCTGGCAGCTGTGCCTGTTTCCATaGTGCTTAGTCTTGTATCAC +
Preference number: 5 (lower is better)
Translates to: PIMHVISCNPTRSPRCWQLCLFP*CLVLYH
Trigger: GTGATACAAGACTAAGCACAATGGAAACAGGCACAG...CTGCCAGCACCTAGGACTTCGAGTTGGGTTGCAGCTTATGACATGCATGATAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376052.5
ENST00000651448.1
ENST00000651544.1
CDS-3UTR CAA 90 bp TCAGGTGGGACAGTGAAGCTAGAAGCTGATACTGGGGCTGCCTTGCAGAGATCTTTCCCCACTCTTGGGTaGATGAAAGTTATATGTCAG +
Preference number: 5 (lower is better)
Translates to: SGGTVKLEADTGAALQRSFPTLG*MKVICQ
Trigger: CTGACATATAACTTTCATCAACCCAAGAGTGGGGAA...AGATCTCTGCAAGGCAGCCCCAGTATCAGCTTCTAGCTTCACTGTCCCACCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651448.1
CDS-3UTR CAA 90 bp CCAAAACCTATCATGCATGTCATAAGCTGCAACCCAACTCGAAGTCCTAGGTGCAAAGTAGTGGGCAGCTaGGAGTTACTTCCCCACTCT +
Preference number: 5 (lower is better)
Translates to: PKPIMHVISCNPTRSPRCKVVGS*ELLPHS
Trigger: AGAGTGGGGAAGTAACTCCAAGCTGCCCACTACTTT...GCACCTAGGACTTCGAGTTGGGTTGCAGCTTATGACATGCATGATAGGTTTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376052.5
ENST00000651448.1
ENST00000651544.1
ENST00000651748.1
CDS-3UTR CAA 90 bp GCTCCAGCAACTGCCACTCATTTGTGCTGGTTCTACTTTTTCCCCTTAATTGAAGGAAATGGCTCCGTCTaGAGCCTGGGTGTGAAGAAG +
Preference number: 5 (lower is better)
Translates to: APATATHLCWFYFFPLIEGNGSV*SLGVKK
Trigger: CTTCTTCACACCCAGGCTCAAGACGGAGCCATTTCC...TTCAATTAAGGGGAAAAAGTAGAACCAGCACAAATGAGTGGCAGTTGCTGGAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376052.5
ENST00000651448.1
ENST00000651544.1
ENST00000651748.1
CDS-3UTR CAA 90 bp CCTAGGACAGGAAAAGCTTCAGTCAGTGTTCCTTTCTCTGGAAGAGAACAAAACGGAAATGGCTCCGTCTaGAGCCTGGGTGTGAAGAAG +
Preference number: 5 (lower is better)
Translates to: PRTGKASVSVPFSGREQNGNGSV*SLGVKK
Trigger: CTTCTTCACACCCAGGCTCAAGACGGAGCCATTTCC...GTTTTGTTCTCTTCCAGAGAAAGGAACACTGACTGAAGCTTTTCCTGTCCTAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000651448.1
ENST00000651748.1
CDS-3UTR CAA 90 bp TTTGGCTCTTCTCCTAAGCCACTCTTATTGAGTGTCTTTAGCTGGGCTGGCAGGAATTTGGCCAGTGAGTaGCTTCTCCGTAACTGTAGT +
Preference number: 5 (lower is better)
Translates to: FGSSPKPLLLSVFSWAGRNLASE*LLRNCS
Trigger: ACTACAGTTACGGAGAAGCAACTCACTGGCCAAATT...CCTGCCAGCCCAGCTAAAGACACTCAATAAGAGTGGCTTAGGAGAAGAGCCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493770.2
CDS-3UTR CAA 90 bp ACACGAACACACTGTCACTTCAGCCCATGTTGCACCCTCAGGAACCTCAATAAAATGCCTCCACATGCATaGGGGGAAGACATAGATGTT +
Preference number: 5 (lower is better)
Translates to: TRTHCHFSPCCTLRNLNKMPPHA*GEDIDV
Trigger: AACATCTATGTCTTCCCCCAATGCATGTGGAGGCAT...TTTATTGAGGTTCCTGAGGGTGCAACATGGGCTGAAGTGACAGTGTGTTCGTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651448.1
CDS-3UTR CAA 90 bp CAGGTGAAAGTCCATGAGTGTGTGAGAGAGAACATGCATGTAGCTTTCATGGATTCACTTCAGCCCATGTaGCACCCTCAGGAACCTCAA +
Preference number: 5 (lower is better)
Translates to: QVKVHECVRENMHVAFMDSLQPM*HPQEPQ
Trigger: TTGAGGTTCCTGAGGGTGCAACATGGGCTGAAGTGA...ATCCATGAAAGCTACATGCATGTTCTCTCTCACACACTCATGGACTTTCACCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376052.5
CDS-3UTR CAA 90 bp ACATCTCTTGATCCTAAAGGTTTTGTTTTTGCACTCACTGGGCGCAGTGTTTGGCACTGGGCGCAGTGTTaGGACCCAGTTCTTCAAAGT +
Preference number: 5 (lower is better)
Translates to: TSLDPKGFVFALTGRSVWHWAQC*DPVLQS
Trigger: ACTTTGAAGAACTGGGTCCAAACACTGCGCCCAGTG...CCAAACACTGCGCCCAGTGAGTGCAAAAACAAAACCTTTAGGATCAAGAGATGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651748.1
CDS-3UTR CAA 90 bp AGATTTATTGAAGCAGTTATGCTCCAGCAACTGCCACTCATTTGTGCTGGTTCTGGAAATGGCTCCGTCTaGAGCCTGGGTGTGAAGAAG +
Preference number: 5 (lower is better)
Translates to: RFIEAVMLQQLPLICAGSGNGSV*SLGVKK
Trigger: CTTCTTCACACCCAGGCTCAAGACGGAGCCATTTCC...AGAACCAGCACAAATGAGTGGCAGTTGCTGGAGCATAACTGCTTCAATAAATCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376052.5
ENST00000651448.1
ENST00000651544.1
ENST00000651748.1
CDS-3UTR CAA 90 bp CAACCTTTCCTACAAAGGGCATCTACGAGGGTGGATTTTTGTTTGTCCATGTCAATTTTCCTTGTCGTTTaGCTGCAGACTGCCCCTGGG +
Preference number: 5 (lower is better)
Translates to: QPFLQRASTRVDFCLSMSIFLVV*LQTAPG
Trigger: CCCAGGGGCAGTCTGCAGCAAAACGACAAGGAAAAT...TGACATGGACAAACAAAAATCCACCCTCGTAGATGCCCTTTGTAGGAAAGGTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000651921.1
CDS-3UTR CAA 90 bp CGAACACACTGTCACTTCAGCCCATGTTGCACCCTCAGGAACCTCAATAAAATGAATTTGGCCAGTGAGTaGCTTCTCCGTAACTGTAGT +
Preference number: 5 (lower is better)
Translates to: RTHCHFSPCCTLRNLNKMNLASE*LLRNCS
Trigger: ACTACAGTTACGGAGAAGCAACTCACTGGCCAAATT...CATTTTATTGAGGTTCCTGAGGGTGCAACATGGGCTGAAGTGACAGTGTGTTCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651448.1
CDS-3UTR CAA 90 bp CCTATCATGCATGTCATAAGCTGCAACCCAACTCGAAGTCCTAGGTGCTGGCAGCAATGCAAAATTCAATaGCTTTTCCACCTAGGACAG +
Preference number: 5 (lower is better)
Translates to: PIMHVISCNPTRSPRCWQQCKIQ*LFHLGQ
Trigger: CTGTCCTAGGTGGAAAAGCAATTGAATTTTGCATTG...CTGCCAGCACCTAGGACTTCGAGTTGGGTTGCAGCTTATGACATGCATGATAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376052.5
ENST00000651448.1
ENST00000651544.1
ENST00000651748.1
CDS-3UTR CAA 90 bp AGTTATGCAGGGAGCCAGATCTTCGTATTTCAAGGAGGACTGAACATCAAAGCGCTAAAGGTTTTGTTTTaGCACTCACTGGGCGCAGTG +
Preference number: 5 (lower is better)
Translates to: SYAGSQIFVFQGGLNIKALKVLF*HSLGAV
Trigger: CACTGCGCCCAGTGAGTGCAAAAACAAAACCTTTAG...CGCTTTGATGTTCAGTCCTCCTTGAAATACGAAGATCTGGCTCCCTGCATAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651748.1
CDS-3UTR CAA 90 bp AGCCAGATCTTCGTATTTCAAGGAGGACTGAACATCAAAGCGGTTGATTCCTTCAAAGTAGTGGGCAGCTaGGAGTTACTTCCCCACTCT +
Preference number: 5 (lower is better)
Translates to: SQIFVFQGGLNIKAVDSFKVVGS*ELLPHS
Trigger: AGAGTGGGGAAGTAACTCCAAGCTGCCCACTACTTT...GAAGGAATCAACCGCTTTGATGTTCAGTCCTCCTTGAAATACGAAGATCTGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000651448.1
ENST00000651748.1
CDS-3UTR CAA 90 bp TTTTTGTTTGTCCATGTCACTGTGTCTGAGCACTCCTTTCATCCGTCGCTCGGCTGGGATCAGTCTTCATaGCAATATAAACTGCTAGGG +
Preference number: 5 (lower is better)
Translates to: FLFVHVTVSEHSFHPSLGWDQSS*QYKLLG
Trigger: CCCTAGCAGTTTATATTGCAATGAAGACTGATCCCA...GCCGAGCGACGGATGAAAGGAGTGCTCAGACACAGTGACATGGACAAACAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651921.1
CDS-3UTR CAA 90 bp CTCTTGATCCTAAAGGTTTTGTTTTTGCACTCACTGGGCGCAGTGTTTGGACCCGCAACTGCCACTCATTaGTGCTGGTTCTACTTTTTC +
Preference number: 5 (lower is better)
Translates to: LLILKVLFLHSLGAVFGPATATH*CWFYFF
Trigger: GAAAAAGTAGAACCAGCACAAATGAGTGGCAGTTGC...GGGTCCAAACACTGCGCCCAGTGAGTGCAAAAACAAAACCTTTAGGATCAAGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000651748.1
CDS-3UTR CAA 90 bp CCTATCATGCATGTCATAAGCTGCAACCCAACTCGAAGTCCTAGGTGCTGGCAGAAAAGAGCCATATTCTaGGGCTTCTTTGTAGTTTCT +
Preference number: 5 (lower is better)
Translates to: PIMHVISCNPTRSPRCWQKRAIF*GFFVVS
Trigger: AGAAACTACAAAGAAGCCCAAGAATATGGCTCTTTT...CTGCCAGCACCTAGGACTTCGAGTTGGGTTGCAGCTTATGACATGCATGATAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376052.5
ENST00000651448.1
ENST00000651544.1
CDS-3UTR CAA 90 bp CAGGTGAAAGTCCATGAGTGTGTGAGAGAGAACATGCATGTAGCTTTCATGGATATGCCTCCACATGCATaGGGGGAAGACATAGATGTT +
Preference number: 5 (lower is better)
Translates to: QVKVHECVRENMHVAFMDMPPHA*GEDIDV
Trigger: AACATCTATGTCTTCCCCCAATGCATGTGGAGGCAT...ATCCATGAAAGCTACATGCATGTTCTCTCTCACACACTCATGGACTTTCACCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376052.5
CDS-3UTR CAA 90 bp ACACGAACACACTGTCACTTCAGCCCATGTTGCACCCTCAGGAACCTCAATAAAGCAAATACTTCTATATaGTCAGCCTTCACTGCAGTG +
Preference number: 5 (lower is better)
Translates to: TRTHCHFSPCCTLRNLNKANTSI*SAFTAV
Trigger: CACTGCAGTGAAGGCTGACAATATAGAAGTATTTGC...TTTATTGAGGTTCCTGAGGGTGCAACATGGGCTGAAGTGACAGTGTGTTCGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651448.1
CDS-3UTR CAA 90 bp TTTTCATTCGTTCCTTTTCAGCATCCAATTGATGAAGTCGTGCAACGTACAGAGTCACTTCAGCCCATGTaGCACCCTCAGGAACCTCAA +
Preference number: 5 (lower is better)
Translates to: FSFVPFQHPIDEVVQRTESLQPM*HPQEPQ
Trigger: TTGAGGTTCCTGAGGGTGCAACATGGGCTGAAGTGA...CTCTGTACGTTGCACGACTTCATCAATTGGATGCTGAAAAGGAACGAATGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000651448.1
ENST00000651748.1
CDS-3UTR CAA 90 bp CCAAAACCTATCATGCATGTCATAAGCTGCAACCCAACTCGAAGTCCTAGGTGCCATGTAGAACAAACTTaGCTGACACCTCAGAAGAAC +
Preference number: 5 (lower is better)
Translates to: PKPIMHVISCNPTRSPRCHVEQT*LTPQKN
Trigger: GTTCTTCTGAGGTGTCAGCAAAGTTTGTTCTACATG...GCACCTAGGACTTCGAGTTGGGTTGCAGCTTATGACATGCATGATAGGTTTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376052.5
ENST00000651448.1
ENST00000651544.1
ENST00000651748.1
CDS-3UTR CAA 90 bp TTTTTGTTTGTCCATGTCACTGTGTCTGAGCACTCCTTTCATCCGTCGCTCGGCTTCCTAGTTCAGTCTTaGACAATGTTAAGGATCCTG +
Preference number: 5 (lower is better)
Translates to: FLFVHVTVSEHSFHPSLGFLVQS*TMLRIL
Trigger: CAGGATCCTTAACATTGTCAAAGACTGAACTAGGAA...GCCGAGCGACGGATGAAAGGAGTGCTCAGACACAGTGACATGGACAAACAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651921.1
CDS-3UTR CAA 90 bp CCTATCATGCATGTCATAAGCTGCAACCCAACTCGAAGTCCTAGGTGCTGGCAGTACGAGGGTGGATTTTaGTTTGTCCATGTCATTTTT +
Preference number: 5 (lower is better)
Translates to: PIMHVISCNPTRSPRCWQYEGGF*FVHVIF
Trigger: AAAAATGACATGGACAAACAAAAATCCACCCTCGTA...CTGCCAGCACCTAGGACTTCGAGTTGGGTTGCAGCTTATGACATGCATGATAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376052.5
ENST00000651448.1
ENST00000651544.1
ENST00000651748.1
CDS-3UTR CAA 90 bp CCTATCATGCATGTCATAAGCTGCAACCCAACTCGAAGTCCTAGGTGCTGGCAGGTAGTTCCTAAAACATaGAATGATACCGCAGTGTTT +
Preference number: 5 (lower is better)
Translates to: PIMHVISCNPTRSPRCWQVVPKT*NDTAVF
Trigger: AAACACTGCGGTATCATTCAATGTTTTAGGAACTAC...CTGCCAGCACCTAGGACTTCGAGTTGGGTTGCAGCTTATGACATGCATGATAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651448.1
CDS-3UTR CAA 90 bp CGAACACACTGTCACTTCAGCCCATGTTGCACCCTCAGGAACCTCAATAAAATGGATGATTCATTTACTTaGAGAAGAGCCGTTGTTGGC +
Preference number: 5 (lower is better)
Translates to: RTHCHFSPCCTLRNLNKMDDSFT*RRAVVG
Trigger: GCCAACAACGGCTCTTCTCAAAGTAAATGAATCATC...CATTTTATTGAGGTTCCTGAGGGTGCAACATGGGCTGAAGTGACAGTGTGTTCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651748.1
CDS-3UTR CAA 90 bp ACACGAACACACTGTCACTTCAGCCCATGTTGCACCCTCAGGAACCTCAATAAACAATGCAAAATTCAATaGCTTTTCCACCTAGGACAG +
Preference number: 5 (lower is better)
Translates to: TRTHCHFSPCCTLRNLNKQCKIQ*LFHLGQ
Trigger: CTGTCCTAGGTGGAAAAGCAATTGAATTTTGCATTG...TTTATTGAGGTTCCTGAGGGTGCAACATGGGCTGAAGTGACAGTGTGTTCGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000651448.1
ENST00000651748.1
CDS-3UTR CAA 90 bp TTTTTGTTTGTCCATGTCACTGTGTCTGAGCACTCCTTTCATCCGTCGCTCGGCAATGGCTGGTTATATTaGGGTGGTAATGTCAAATTG +
Preference number: 5 (lower is better)
Translates to: FLFVHVTVSEHSFHPSLGNGWLY*GGNVKL
Trigger: CAATTTGACATTACCACCCAAATATAACCAGCCATT...GCCGAGCGACGGATGAAAGGAGTGCTCAGACACAGTGACATGGACAAACAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651921.1
CDS-3UTR CAA 90 bp CCAAAACCTATCATGCATGTCATAAGCTGCAACCCAACTCGAAGTCCTAGGTGCTTCCTAGTTCAGTCTTaGACAATGTTAAGGATCCTG +
Preference number: 5 (lower is better)
Translates to: PKPIMHVISCNPTRSPRCFLVQS*TMLRIL
Trigger: CAGGATCCTTAACATTGTCAAAGACTGAACTAGGAA...GCACCTAGGACTTCGAGTTGGGTTGCAGCTTATGACATGCATGATAGGTTTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376052.5
ENST00000651448.1
ENST00000651544.1
ENST00000651748.1
CDS-3UTR CAA 90 bp ACACGAACACACTGTCACTTCAGCCCATGTTGCACCCTCAGGAACCTCAATAAACAAGATGAAGATTTATaGAAGCAGTTATGCTCCAGC +
Preference number: 5 (lower is better)
Translates to: TRTHCHFSPCCTLRNLNKQDEDL*KQLCSS
Trigger: GCTGGAGCATAACTGCTTCAATAAATCTTCATCTTG...TTTATTGAGGTTCCTGAGGGTGCAACATGGGCTGAAGTGACAGTGTGTTCGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651448.1
ENST00000651748.1
CDS-3UTR CAA 90 bp AGACTTGCCCACCAACGAGCAATGCAAAATTCAATTGCTTTTCCACCTAGGACAATGATACCGCAGTGTTaGGACCCAGTTCTTCAAAGT +
Preference number: 5 (lower is better)
Translates to: RLAHQRAMQNSIAFPPRTMIPQC*DPVLQS
Trigger: ACTTTGAAGAACTGGGTCCAAACACTGCGGTATCAT...TGTCCTAGGTGGAAAAGCAATTGAATTTTGCATTGCTCGTTGGTGGGCAAGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651448.1
CDS-3UTR CAA 90 bp TTGGTGGAGGTATTAAGTAGTAATGAACAGGGATTACATCAGCTTTCTTTCCTAGGCTATCCACCATCCTaGACTTTGCTGGTCAGGTGG +
Preference number: 5 (lower is better)
Translates to: LVEVLSSNEQGLHQLSFLGYPPS*TLLVRW
Trigger: CCACCTGACCAGCAAAGTCAAGGATGGTGGATAGCC...TAGGAAAGAAAGCTGATGTAATCCCTGTTCATTACTACTTAATACCTCCACCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651448.1
CDS-3UTR CAA 90 bp TTCCTTTTCAGCATCCAATTGATGAAGTCGTGCAACGTACAGAGGAAGATAATTCTTGATGGAAAGAATTaGAGCACCAGGAGCTACCCC +
Preference number: 5 (lower is better)
Translates to: FLFSIQLMKSCNVQRKIILDGKN*STRSYP
Trigger: GGGGTAGCTCCTGGTGCTCAAATTCTTTCCATCAAG...AATTATCTTCCTCTGTACGTTGCACGACTTCATCAATTGGATGCTGAAAAGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651448.1
CDS-3UTR CAA 90 bp CAACATCTCAGCTGTGCCAAAAGAGCCATATTCTTGGGCTTCTTTGTAGTTTCTCTGTGCCTGTTTCCATaGTGCTTAGTCTTGTATCAC +
Preference number: 5 (lower is better)
Translates to: QHLSCAKRAIFLGFFVVSLCLFP*CLVLYH
Trigger: GTGATACAAGACTAAGCACAATGGAAACAGGCACAG...AGAAACTACAAAGAAGCCCAAGAATATGGCTCTTTTGGCACAGCTGAGATGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651448.1
CDS-3UTR CAA 90 bp AGATTTATTGAAGCAGTTATGCTCCAGCAACTGCCACTCATTTGTGCTGGTTCTAATTTGGCCAGTGAGTaGCTTCTCCGTAACTGTAGT +
Preference number: 5 (lower is better)
Translates to: RFIEAVMLQQLPLICAGSNLASE*LLRNCS
Trigger: ACTACAGTTACGGAGAAGCAACTCACTGGCCAAATT...AGAACCAGCACAAATGAGTGGCAGTTGCTGGAGCATAACTGCTTCAATAAATCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376052.5
ENST00000651448.1
ENST00000651544.1
CDS-3UTR CAA 90 bp CAGGTGAAAGTCCATGAGTGTGTGAGAGAGAACATGCATGTAGCTTTCATGGATGCAAATACTTCTATATaGTCAGCCTTCACTGCAGTG +
Preference number: 5 (lower is better)
Translates to: QVKVHECVRENMHVAFMDANTSI*SAFTAV
Trigger: CACTGCAGTGAAGGCTGACAATATAGAAGTATTTGC...ATCCATGAAAGCTACATGCATGTTCTCTCTCACACACTCATGGACTTTCACCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376052.5
CDS-3UTR CAA 90 bp GCTCCAGCAACTGCCACTCATTTGTGCTGGTTCTACTTTTTCCCCTTAATTGAACATGTAGAACAAACTTaGCTGACACCTCAGAAGAAC +
Preference number: 5 (lower is better)
Translates to: APATATHLCWFYFFPLIEHVEQT*LTPQKN
Trigger: GTTCTTCTGAGGTGTCAGCAAAGTTTGTTCTACATG...TTCAATTAAGGGGAAAAAGTAGAACCAGCACAAATGAGTGGCAGTTGCTGGAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376052.5
ENST00000651448.1
ENST00000651544.1
ENST00000651748.1
CDS-3UTR CAA 90 bp TTCCTTTTCAGCATCCAATTGATGAAGTCGTGCAACGTACAGAGGAAGATAATTGCTTCGATATGCTCTTaGCTTCACAAGCTGGACTGC +
Preference number: 5 (lower is better)
Translates to: FLFSIQLMKSCNVQRKIIASICS*LHKLDC
Trigger: GCAGTCCAGCTTGTGAAGCAAAGAGCATATCGAAGC...AATTATCTTCCTCTGTACGTTGCACGACTTCATCAATTGGATGCTGAAAAGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000651448.1
ENST00000651748.1
CDS-3UTR CAA 90 bp ACATCTCTTGATCCTAAAGGTTTTGTTTTTGCACTCACTGGGCGCAGTGTTTGGCTTTTCAGCATCCAATaGATGAAGTCGTGCAACGTA +
Preference number: 5 (lower is better)
Translates to: TSLDPKGFVFALTGRSVWLFSIQ*MKSCNV
Trigger: TACGTTGCACGACTTCATCAATTGGATGCTGAAAAG...CCAAACACTGCGCCCAGTGAGTGCAAAAACAAAACCTTTAGGATCAAGAGATGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000651748.1
CDS-3UTR CAA 90 bp CTCCATTCTCTTACTGGACTAAACCTATACAAATGGGGACCTGTATGTGTGTGCTGGGATCAGTCTTCATaGCAATATAAACTGCTAGGG +
Preference number: 5 (lower is better)
Translates to: LHSLTGLNLYKWGPVCVCWDQSS*QYKLLG
Trigger: CCCTAGCAGTTTATATTGCAATGAAGACTGATCCCA...GCACACACATACAGGTCCCCATTTGTATAGGTTTAGTCCAGTAAGAGAATGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376052.5
CDS-3UTR CAA 90 bp GCTCCAGCAACTGCCACTCATTTGTGCTGGTTCTACTTTTTCCCCTTAATTGAATGGGATCAGTCTTCATaGCAATATAAACTGCTAGGG +
Preference number: 5 (lower is better)
Translates to: APATATHLCWFYFFPLIEWDQSS*QYKLLG
Trigger: CCCTAGCAGTTTATATTGCAATGAAGACTGATCCCA...TTCAATTAAGGGGAAAAAGTAGAACCAGCACAAATGAGTGGCAGTTGCTGGAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376052.5
ENST00000651448.1
ENST00000651544.1
ENST00000651748.1
CDS-3UTR CAA 90 bp CGAACACACTGTCACTTCAGCCCATGTTGCACCCTCAGGAACCTCAATAAAATGTACGAGGGTGGATTTTaGTTTGTCCATGTCATTTTT +
Preference number: 5 (lower is better)
Translates to: RTHCHFSPCCTLRNLNKMYEGGF*FVHVIF
Trigger: AAAAATGACATGGACAAACAAAAATCCACCCTCGTA...CATTTTATTGAGGTTCCTGAGGGTGCAACATGGGCTGAAGTGACAGTGTGTTCG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000651448.1
ENST00000651748.1
CDS-3UTR CAA 90 bp CTCCATTCTCTTACTGGACTAAACCTATACAAATGGGGACCTGTATGTGTGTGCGGATGTGAAAATGACTaGCCTGTAATTACCCCAAGA +
Preference number: 5 (lower is better)
Translates to: LHSLTGLNLYKWGPVCVCGCEND*PVITPR
Trigger: TCTTGGGGTAATTACAGGCAAGTCATTTTCACATCC...GCACACACATACAGGTCCCCATTTGTATAGGTTTAGTCCAGTAAGAGAATGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000376052.5
CDS-3UTR CAA 90 bp ATTTGCCGCATCAACAATTTCATTAAGTCTTTTCATTCGTTCCTTTTCAGCATCTCACTTCAGCCCATGTaGCACCCTCAGGAACCTCAA +
Preference number: 5 (lower is better)
Translates to: ICRINNFIKSFHSFLFSISLQPM*HPQEPQ
Trigger: TTGAGGTTCCTGAGGGTGCAACATGGGCTGAAGTGA...GATGCTGAAAAGGAACGAATGAAAAGACTTAATGAAATTGTTGATGCGGCAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000651448.1
ENST00000651748.1
CDS-3UTR CAA 90 bp AGATTTATTGAAGCAGTTATGCTCCAGCAACTGCCACTCATTTGTGCTGGTTCTCATGTAGAACAAACTTaGCTGACACCTCAGAAGAAC +
Preference number: 5 (lower is better)
Translates to: RFIEAVMLQQLPLICAGSHVEQT*LTPQKN
Trigger: GTTCTTCTGAGGTGTCAGCAAAGTTTGTTCTACATG...AGAACCAGCACAAATGAGTGGCAGTTGCTGGAGCATAACTGCTTCAATAAATCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376052.5
ENST00000651448.1
ENST00000651544.1
ENST00000651748.1
CDS-3UTR CAA 90 bp AGATTTATTGAAGCAGTTATGCTCCAGCAACTGCCACTCATTTGTGCTGGTTCTTTGATCCTAAAGGTTTaGTTTTTGCACTCACTGGGC +
Preference number: 5 (lower is better)
Translates to: RFIEAVMLQQLPLICAGSLILKV*FLHSLG
Trigger: GCCCAGTGAGTGCAAAAACAAAACCTTTAGGATCAA...AGAACCAGCACAAATGAGTGGCAGTTGCTGGAGCATAACTGCTTCAATAAATCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000376052.5
ENST00000651448.1
ENST00000651748.1
CDS-3UTR CAA 90 bp CAGGTGAAAGTCCATGAGTGTGTGAGAGAGAACATGCATGTAGCTTTCATGGATGACCATCTCATAAAGTaGACGGTTATTTGGCAAAAC +
Preference number: 5 (lower is better)
Translates to: QVKVHECVRENMHVAFMDDHLIK*TVIWQN
Trigger: GTTTTGCCAAATAACCGTCAACTTTATGAGATGGTC...ATCCATGAAAGCTACATGCATGTTCTCTCTCACACACTCATGGACTTTCACCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376052.5
CDS-3UTR CAA 90 bp GTATTTCAAGGAGGACTGAACATCAAAGCGGTTGATTCCTTCCGATGCATGAATTTCCCCACTCTTGGGTaGATGAAAGTTATATGTCAG +
Preference number: 5 (lower is better)
Translates to: VFQGGLNIKAVDSFRCMNFPTLG*MKVICQ
Trigger: CTGACATATAACTTTCATCAACCCAAGAGTGGGGAA...ATTCATGCATCGGAAGGAATCAACCGCTTTGATGTTCAGTCCTCCTTGAAATAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000651448.1
ENST00000651748.1
CDS-3UTR CAA 90 bp CTCCATTCTCTTACTGGACTAAACCTATACAAATGGGGACCTGTATGTGTGTGCCAAGATGAAGATTTATaGAAGCAGTTATGCTCCAGC +
Preference number: 5 (lower is better)
Translates to: LHSLTGLNLYKWGPVCVCQDEDL*KQLCSS
Trigger: GCTGGAGCATAACTGCTTCAATAAATCTTCATCTTG...GCACACACATACAGGTCCCCATTTGTATAGGTTTAGTCCAGTAAGAGAATGGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376052.5
CDS-3UTR CAA 90 bp TCTATGAGAAACAATAAATGGAAGGTCTTTAAGGCGTTCCAAATCACTGATTTGGTTGACAGTACTGTGTaGTGTGCAGCACAGACCTCC +
Preference number: 5 (lower is better)
Translates to: SMRNNKWKVFKAFQITDLVDSTV*CAAQTS
Trigger: GGAGGTCTGTGCTGCACACAACACAGTACTGTCAAC...CAAATCAGTGATTTGGAACGCCTTAAAGACCTTCCATTTATTGTTTCTCATAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651448.1
CDS-3UTR CAA 90 bp AGCCAGATCTTCGTATTTCAAGGAGGACTGAACATCAAAGCGGTTGATTCCTTCAAAAGAGCCATATTCTaGGGCTTCTTTGTAGTTTCT +
Preference number: 5 (lower is better)
Translates to: SQIFVFQGGLNIKAVDSFKRAIF*GFFVVS
Trigger: AGAAACTACAAAGAAGCCCAAGAATATGGCTCTTTT...GAAGGAATCAACCGCTTTGATGTTCAGTCCTCCTTGAAATACGAAGATCTGGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651448.1
CDS-3UTR CAA 90 bp AGATTCAGCTGTCTGGCACTTACACATGTATTCATAGAGTTCATTCTGATGCTCCATGTAGAACAAACTTaGCTGACACCTCAGAAGAAC +
Preference number: 5 (lower is better)
Translates to: RFSCLALTHVFIEFILMLHVEQT*LTPQKN
Trigger: GTTCTTCTGAGGTGTCAGCAAAGTTTGTTCTACATG...GAGCATCAGAATGAACTCTATGAATACATGTGTAAGTGCCAGACAGCTGAATCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376052.5
ENST00000651448.1
ENST00000651544.1
ENST00000651748.1
CDS-3UTR CAA 90 bp TGTATCTTTACAATACCTGATAAAGATTCAGCTGTCTGGCACTTACACATGTATGCTTCGATATGCTCTTaGCTTCACAAGCTGGACTGC +
Preference number: 5 (lower is better)
Translates to: CIFTIPDKDSAVWHLHMYASICS*LHKLDC
Trigger: GCAGTCCAGCTTGTGAAGCAAAGAGCATATCGAAGC...ATACATGTGTAAGTGCCAGACAGCTGAATCTTTATCAGGTATTGTAAAGATACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376052.5
ENST00000651448.1
ENST00000651544.1
ENST00000651748.1
CDS-3UTR CAA 90 bp TGCACCCTCAGGAACCTCAATAAAATGCCTTCGAATTTGACCAGGTTTAAAGTGGACCATCTCATAAAGTaGACGGTTATTTGGCAAAAC +
Preference number: 5 (lower is better)
Translates to: CTLRNLNKMPSNLTRFKVDHLIK*TVIWQN
Trigger: GTTTTGCCAAATAACCGTCAACTTTATGAGATGGTC...CACTTTAAACCTGGTCAAATTCGAAGGCATTTTATTGAGGTTCCTGAGGGTGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000651448.1
ENST00000651748.1
CDS-3UTR CAA 90 bp CATATCATATGTGTATCTTTACAATACCTGATAAAGATTCAGCTGTCTGGCACTAAAGTAGTGGGCAGCTaGGAGTTACTTCCCCACTCT +
Preference number: 5 (lower is better)
Translates to: HIICVSLQYLIKIQLSGTKVVGS*ELLPHS
Trigger: AGAGTGGGGAAGTAACTCCAAGCTGCCCACTACTTT...AGTGCCAGACAGCTGAATCTTTATCAGGTATTGTAAAGATACACATATGATATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376052.5
ENST00000651448.1
ENST00000651544.1
ENST00000651748.1
CDS-3UTR CAA 90 bp TCTATGAGAAACAATAAATGGAAGGTCTTTAAGGCGTTCCAAATCACTGATTTGAAAGTAGTGGGCAGCTaGGAGTTACTTCCCCACTCT +
Preference number: 5 (lower is better)
Translates to: SMRNNKWKVFKAFQITDLKVVGS*ELLPHS
Trigger: AGAGTGGGGAAGTAACTCCAAGCTGCCCACTACTTT...CAAATCAGTGATTTGGAACGCCTTAAAGACCTTCCATTTATTGTTTCTCATAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000651448.1
ENST00000651748.1
CDS-3UTR CAA 90 bp CAACCTTTCCTACAAAGGGCATCTACGAGGGTGGATTTTTGTTTGTCCATGTCAAATGGCTGGTTATATTaGGGTGGTAATGTCAAATTG +
Preference number: 5 (lower is better)
Translates to: QPFLQRASTRVDFCLSMSNGWLY*GGNVKL
Trigger: CAATTTGACATTACCACCCAAATATAACCAGCCATT...TGACATGGACAAACAAAAATCCACCCTCGTAGATGCCCTTTGTAGGAAAGGTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000651448.1
ENST00000651748.1
ENST00000651921.1
CDS-3UTR CAA 90 bp TTAAGAAAACACCATGATGTCAGAGGTCTAGATTTACATGTATTAAGCCACACGATTTTCCTTGTCGTTTaGCTGCAGACTGCCCAGCTT +
Preference number: 5 (lower is better)
Translates to: LRKHHDVRGLDLHVLSHTIFLVV*LQTAQL
Trigger: AAGCTGGGCAGTCTGCAGCAAAACGACAAGGAAAAT...CGTGTGGCTTAATACATGTAAATCTAGACCTCTGACATCATGGTGTTTTCTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376052.5
CDS-3UTR CAA 90 bp CAGGTGAAAGTCCATGAGTGTGTGAGAGAGAACATGCATGTAGCTTTCATGGATATACATACACACAATTaGCCATTAGATAAGGGACTG +
Preference number: 5 (lower is better)
Translates to: QVKVHECVRENMHVAFMDIHTHN*PLDKGL
Trigger: CAGTCCCTTATCTAATGGCAAATTGTGTGTATGTAT...ATCCATGAAAGCTACATGCATGTTCTCTCTCACACACTCATGGACTTTCACCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376052.5
CDS-3UTR CAA 90 bp TGTATCTTTACAATACCTGATAAAGATTCAGCTGTCTGGCACTTACACATGTATATGCCTCCACATGCATaGGGGGAAGACATAGATGTT +
Preference number: 5 (lower is better)
Translates to: CIFTIPDKDSAVWHLHMYMPPHA*GEDIDV
Trigger: AACATCTATGTCTTCCCCCAATGCATGTGGAGGCAT...ATACATGTGTAAGTGCCAGACAGCTGAATCTTTATCAGGTATTGTAAAGATACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000376052.5
ENST00000651448.1
ENST00000651544.1
CDS-3UTR CAA 90 bp AGATTCAGCTGTCTGGCACTTACACATGTATTCATAGAGTTCATTCTGATGCTCCAATGCAAAATTCAATaGCTTTTCCACCTAGGACAG +
Preference number: 5 (lower is better)
Translates to: RFSCLALTHVFIEFILMLQCKIQ*LFHLGQ
Trigger: CTGTCCTAGGTGGAAAAGCAATTGAATTTTGCATTG...GAGCATCAGAATGAACTCTATGAATACATGTGTAAGTGCCAGACAGCTGAATCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376052.5
ENST00000651448.1
ENST00000651544.1
ENST00000651748.1
CDS-3UTR CAA 90 bp TCAAAGAATACTGATGTGGATAGGCATCGCCTGAACCCATCTGTCTTTTGTTCTGAACCCATCTGTCTTTaGTTCTGGTCAAAAATAATC +
Preference number: 5 (lower is better)
Translates to: SKNTDVDRHRLNPSVFCSEPICL*FWSKII
Trigger: GATTATTTTTGACCAGAACAAAAGACAGATGGGTTC...AGAACAAAAGACAGATGGGTTCAGGCGATGCCTATCCACATCAGTATTCTTTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000651448.1
ENST00000651748.1
CDS-3UTR CAA 90 bp TGTTTATTTGGTGGAGGAATGACGAGAGATGCACGTGCAGTAGCCAAAGATAAAAATGGCTGGTTATATTaGGGTGGTAATGTCAAATTG +
Preference number: 5 (lower is better)
Translates to: CLFGGGMTRDARAVAKDKNGWLY*GGNVKL
Trigger: CAATTTGACATTACCACCCAAATATAACCAGCCATT...TTTATCTTTGGCTACTGCACGTGCATCTCTCGTCATTCCTCCACCAAATAAACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376052.5
CDS-3UTR CAA 90 bp TTCACAAATTCTCCCAGAATTTGGCCAGTGAGTTGCTTCTCCGTAACTGTAGTTAATGGCTGGTTATATTaGGGTGGTAATGTCAAATTG +
Preference number: 5 (lower is better)
Translates to: FTNSPRIWPVSCFSVTVVNGWLY*GGNVKL
Trigger: CAATTTGACATTACCACCCAAATATAACCAGCCATT...AACTACAGTTACGGAGAAGCAACTCACTGGCCAAATTCTGGGAGAATTTGTGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651448.1
CDS-3UTR CAA 90 bp AAAACACATCAAGCTTTGCTGACTTTTGGCTCTTCTCCTAAGCCACTCTTATTGATATCCACGGCCTGGTaGTTTTCAATGACACTTTAT +
Preference number: 5 (lower is better)
Translates to: KTHQALLTFGSSPKPLLLISTAW*FSMTLY
Trigger: ATAAAGTGTCATTGAAAACAACCAGGCCGTGGATAT...CAATAAGAGTGGCTTAGGAGAAGAGCCAAAAGTCAGCAAAGCTTGATGTGTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000493770.2
CDS-3UTR CAA 90 bp TGTATCTTTACAATACCTGATAAAGATTCAGCTGTCTGGCACTTACACATGTATAATTTGGCCAGTGAGTaGCTTCTCCGTAACTGTAGT +
Preference number: 5 (lower is better)
Translates to: CIFTIPDKDSAVWHLHMYNLASE*LLRNCS
Trigger: ACTACAGTTACGGAGAAGCAACTCACTGGCCAAATT...ATACATGTGTAAGTGCCAGACAGCTGAATCTTTATCAGGTATTGTAAAGATACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376052.5
ENST00000651448.1
ENST00000651544.1
CDS-3UTR CAA 90 bp AGATTCAGCTGTCTGGCACTTACACATGTATTCATAGAGTTCATTCTGATGCTCGAACCCAAGATGAATTaGAAGTCAGAGCTAAATGAA +
Preference number: 5 (lower is better)
Translates to: RFSCLALTHVFIEFILMLEPKMN*KSELNE
Trigger: TTCATTTAGCTCTGACTTCAAATTCATCTTGGGTTC...GAGCATCAGAATGAACTCTATGAATACATGTGTAAGTGCCAGACAGCTGAATCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376052.5
ENST00000651448.1
ENST00000651544.1
CDS-3UTR CAA 90 bp AGGTCTAGATTTACATGTATTAAGCCACACGTCAGTGAATTCTCTGATAAATACGCAACTGCCACTCATTaGTGCTGGTTCTACTTTTTC +
Preference number: 5 (lower is better)
Translates to: RSRFTCIKPHVSEFSDKYATATH*CWFYFF
Trigger: GAAAAAGTAGAACCAGCACAAATGAGTGGCAGTTGC...GTATTTATCAGAGAATTCACTGACGTGTGGCTTAATACATGTAAATCTAGACCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376052.5
ENST00000651448.1
ENST00000651544.1
ENST00000651748.1
CDS-3UTR CAA 90 bp AGATTCAGCTGTCTGGCACTTACACATGTATTCATAGAGTTCATTCTGATGCTCATTAATTTCCAACAGTaGATCAGCCGTATAACCTTG +
Preference number: 5 (lower is better)
Translates to: RFSCLALTHVFIEFILMLINFQQ*ISRITL
Trigger: CAAGGTTATACGGCTGATCAACTGTTGGAAATTAAT...GAGCATCAGAATGAACTCTATGAATACATGTGTAAGTGCCAGACAGCTGAATCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376052.5
CDS-3UTR CAA 90 bp GGCTGTTTGATCTATATGAGAAATAACAGCATTTGCCGCATCAACAATTTCATTTACGAGGGTGGATTTTaGTTTGTCCATGTCACTGTG +
Preference number: 5 (lower is better)
Translates to: GCLIYMRNNSICRINNFIYEGGF*FVHVTV
Trigger: CACAGTGACATGGACAAACAAAAATCCACCCTCGTA...AATGAAATTGTTGATGCGGCAAATGCTGTTATTTCTCATATAGATCAAACAGCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651921.1
CDS-3UTR CAA 90 bp AGACAATCTATGAGAAACAATAAATGGAAGGTCTTTAAGGCGTTCCAAATCACTAAGACAGGTTCTGATTaGTACCCCTTGTGCAAACTG +
Preference number: 5 (lower is better)
Translates to: RQSMRNNKWKVFKAFQITKTGSD*YPLCKL
Trigger: CAGTTTGCACAAGGGGTACAAATCAGAACCTGTCTT...AGTGATTTGGAACGCCTTAAAGACCTTCCATTTATTGTTTCTCATAGATTGTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651448.1
CDS TCA 90 bp CCATTTGAGTATATTTGGTATTCTTGGCTTTACTTGGCAGACAGATaGCAAAAGTACACTGACCTTTCACATTTTAAATCTGAGAAGGGG +
Preference number: 5 (lower is better)
Translates to: PFEYIWYSWLYLADR*QKYTDLSHFKSEKG
Trigger: CCCCTTCTCAGATTTAAAATGTGAAAGGTCAGTGTACTTTTGTCATCTGTCTGCCAAGTAAAGCCAAGAATACCAAATATACTCAAATGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652033.1
CDS-3UTR CAA 90 bp TTCCTTTTCAGCATCCAATTGATGAAGTCGTGCAACGTACAGAGGAAGATAATTAAAGTTGACGGTTATTaGGCAAAACATCTCTTGATC +
Preference number: 5 (lower is better)
Translates to: FLFSIQLMKSCNVQRKIIKVDGY*AKHLLI
Trigger: GATCAAGAGATGTTTTGCCAAATAACCGTCAACTTT...AATTATCTTCCTCTGTACGTTGCACGACTTCATCAATTGGATGCTGAAAAGGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000651448.1
ENST00000651748.1
CDS-3UTR CAA 90 bp TGTATCTTTACAATACCTGATAAAGATTCAGCTGTCTGGCACTTACACATGTATTTCCCCACTCTTGGGTaGATGAAAGTTATATGTCAG +
Preference number: 5 (lower is better)
Translates to: CIFTIPDKDSAVWHLHMYFPTLG*MKVICQ
Trigger: CTGACATATAACTTTCATCAACCCAAGAGTGGGGAA...ATACATGTGTAAGTGCCAGACAGCTGAATCTTTATCAGGTATTGTAAAGATACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376052.5
ENST00000651448.1
ENST00000651748.1
CDS-3UTR CAA 90 bp AGACAATCTATGAGAAACAATAAATGGAAGGTCTTTAAGGCGTTCCAAATCACTCTTTTCAGCATCCAATaGATGAAGTCGTGCAACGTA +
Preference number: 5 (lower is better)
Translates to: RQSMRNNKWKVFKAFQITLFSIQ*MKSCNV
Trigger: TACGTTGCACGACTTCATCAATTGGATGCTGAAAAG...AGTGATTTGGAACGCCTTAAAGACCTTCCATTTATTGTTTCTCATAGATTGTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000651448.1
ENST00000651748.1
CDS-3UTR CAA 90 bp TGCAAATGTCAAAACCTTATTGTCAAAGAGATCAGTCCATTTAGTAGTTTCCCACTTTTCAGCATCCAATaGATGAAGTCGTGCAACGTA +
Preference number: 5 (lower is better)
Translates to: CKCQNLIVKEISPFSSFPLFSIQ*MKSCNV
Trigger: TACGTTGCACGACTTCATCAATTGGATGCTGAAAAG...TGGGAAACTACTAAATGGACTGATCTCTTTGACAATAAGGTTTTGACATTTGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000651448.1
ENST00000651748.1
ENST00000651921.1
CDS-3UTR CAA 90 bp AATGAACAGGGATTACATCAGCTTTCTTTCCTAGTTCAGTCTTTGACAATGTTAGGATGTGAAAATGACTaGCCTGTAATTACCCCAAGA +
Preference number: 5 (lower is better)
Translates to: NEQGLHQLSFLVQSLTMLGCEND*PVITPR
Trigger: TCTTGGGGTAATTACAGGCAAGTCATTTTCACATCC...TAACATTGTCAAAGACTGAACTAGGAAAGAAAGCTGATGTAATCCCTGTTCATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000651448.1
ENST00000651748.1
CDS-3UTR CAA 90 bp TGTATCTTTACAATACCTGATAAAGATTCAGCTGTCTGGCACTTACACATGTATTCTGATTTGTACCCCTaGTGCAAACTGTTGACAGTA +
Preference number: 5 (lower is better)
Translates to: CIFTIPDKDSAVWHLHMYSDLYP*CKLLTV
Trigger: TACTGTCAACAGTTTGCACAAGGGGTACAAATCAGA...ATACATGTGTAAGTGCCAGACAGCTGAATCTTTATCAGGTATTGTAAAGATACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651448.1
CDS-3UTR CAA 90 bp ATTGTCAAAGAGATCAGTCCATTTAGTAGTTTCCCAAAATGTTTCTGCCAGAGAAAAATGCCTTCGAATTaGACCAGGTTTAAAGTGTAC +
Preference number: 5 (lower is better)
Translates to: IVKEISPFSSFPKCFCQRKMPSN*TRFKVY
Trigger: GTACACTTTAAACCTGGTCAAATTCGAAGGCATTTT...TCTCTGGCAGAAACATTTTGGGAAACTACTAAATGGACTGATCTCTTTGACAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000651448.1
ENST00000651748.1
CDS-3UTR CAA 90 bp TTATTGTCAAAGAGATCAGTCCATTTAGTAGTTTCCCAAAATGTTTCTGCCAGAGACCATCTCATAAAGTaGACGGTTATTTGGCAAAAC +
Preference number: 5 (lower is better)
Translates to: LLSKRSVHLVVSQNVSARDHLIK*TVIWQN
Trigger: GTTTTGCCAAATAACCGTCAACTTTATGAGATGGTC...TCTGGCAGAAACATTTTGGGAAACTACTAAATGGACTGATCTCTTTGACAATAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000651448.1
ENST00000651748.1
CDS-3UTR CAA 90 bp TTATTGTCAAAGAGATCAGTCCATTTAGTAGTTTCCCAAAATGTTTCTGCCAGATTCCTAGTTCAGTCTTaGACAATGTTAAGGATCCTG +
Preference number: 5 (lower is better)
Translates to: LLSKRSVHLVVSQNVSARFLVQS*TMLRIL
Trigger: CAGGATCCTTAACATTGTCAAAGACTGAACTAGGAA...TCTGGCAGAAACATTTTGGGAAACTACTAAATGGACTGATCTCTTTGACAATAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000651448.1
ENST00000651748.1
ENST00000651921.1
CDS-3UTR CAA 90 bp AGGTCTAGATTTACATGTATTAAGCCACACGTCAGTGAATTCTCTGATAAATACTTCCTAGTTCAGTCTTaGACAATGTTAAGGATCCTG +
Preference number: 5 (lower is better)
Translates to: RSRFTCIKPHVSEFSDKYFLVQS*TMLRIL
Trigger: CAGGATCCTTAACATTGTCAAAGACTGAACTAGGAA...GTATTTATCAGAGAATTCACTGACGTGTGGCTTAATACATGTAAATCTAGACCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376052.5
ENST00000651448.1
ENST00000651544.1
ENST00000651748.1
CDS-3UTR CAA 90 bp ATTTGCCGCATCAACAATTTCATTAAGTCTTTTCATTCGTTCCTTTTCAGCATCCTAAAGGTTTTGTTTTaGCACTCACTGGGCTGTAAT +
Preference number: 5 (lower is better)
Translates to: ICRINNFIKSFHSFLFSILKVLF*HSLGCN
Trigger: ATTACAGCCCAGTGAGTGCAAAAACAAAACCTTTAG...GATGCTGAAAAGGAACGAATGAAAAGACTTAATGAAATTGTTGATGCGGCAAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000651448.1
CDS CCA 90 bp CCTAGATGTCATAAACTGACATTAAAAGGACTACAGTGTATACGATaGGCAGTAAGTATAAGCAATGTTATCACTTACTTATCATCAGGT +
Preference number: 5 (lower is better)
Translates to: PRCHKLTLKGLQCIR*AVSISNVITYLSSG
Trigger: ACCTGATGATAAGTAAGTGATAACATTGCTTATACTTACTGCCCATCGTATACACTGTAGTCCTTTTAATGTCAGTTTATGACATCTAGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490420.1
CDS-3UTR CAA 90 bp CATATCATATGTGTATCTTTACAATACCTGATAAAGATTCAGCTGTCTGGCACTGAACCCAAGATGAATTaGAAGTCAGAGCTAAATGAA +
Preference number: 5 (lower is better)
Translates to: HIICVSLQYLIKIQLSGTEPKMN*KSELNE
Trigger: TTCATTTAGCTCTGACTTCAAATTCATCTTGGGTTC...AGTGCCAGACAGCTGAATCTTTATCAGGTATTGTAAAGATACACATATGATATG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376052.5
ENST00000651448.1
ENST00000651544.1
CDS-3UTR CAA 90 bp GGTATTAGACAATCTATGAGAAACAATAAATGGAAGGTCTTTAAGGCGTTCCAAGAACCCAAGATGAATTaGAAGTCAGAGCTAAATGAA +
Preference number: 5 (lower is better)
Translates to: GIRQSMRNNKWKVFKAFQEPKMN*KSELNE
Trigger: TTCATTTAGCTCTGACTTCAAATTCATCTTGGGTTC...TTGGAACGCCTTAAAGACCTTCCATTTATTGTTTCTCATAGATTGTCTAATACC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651448.1
CDS-3UTR CAA 90 bp TGTATCTTTACAATACCTGATAAAGATTCAGCTGTCTGGCACTTACACATGTATAAAGTTGACGGTTATTaGGCAAAACATCTCTTGATC +
Preference number: 5 (lower is better)
Translates to: CIFTIPDKDSAVWHLHMYKVDGY*AKHLLI
Trigger: GATCAAGAGATGTTTTGCCAAATAACCGTCAACTTT...ATACATGTGTAAGTGCCAGACAGCTGAATCTTTATCAGGTATTGTAAAGATACA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376052.5
ENST00000651448.1
ENST00000651748.1
CDS-3UTR CAA 90 bp AGGTCTAGATTTACATGTATTAAGCCACACGTCAGTGAATTCTCTGATAAATACGAACCCATCTGTCTTTaGTTCTGGTCAAAAATAATC +
Preference number: 5 (lower is better)
Translates to: RSRFTCIKPHVSEFSDKYEPICL*FWSKII
Trigger: GATTATTTTTGACCAGAACAAAAGACAGATGGGTTC...GTATTTATCAGAGAATTCACTGACGTGTGGCTTAATACATGTAAATCTAGACCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376052.5
ENST00000651448.1
ENST00000651544.1
ENST00000651748.1
CDS-3UTR CAA 90 bp AGGTCTAGATTTACATGTATTAAGCCACACGTCAGTGAATTCTCTGATAAATACGAATCTGTAGTCGAATaGTATAATCTCCTTTCTCCA +
Preference number: 5 (lower is better)
Translates to: RSRFTCIKPHVSEFSDKYESVVE*YNLLSP
Trigger: TGGAGAAAGGAGATTATACAATTCGACTACAGATTC...GTATTTATCAGAGAATTCACTGACGTGTGGCTTAATACATGTAAATCTAGACCT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376052.5
ENST00000651448.1
ENST00000651544.1
ENST00000651748.1
CDS-3UTR CAA 90 bp CATATCATATGTGTATCTTTACAATACCTGATAAAGATTCAGCTGTCTGGCACTGAATCTGTAGTCGAATaGTATAATCTCCTTTCTCCA +
Preference number: 5 (lower is better)
Translates to: HIICVSLQYLIKIQLSGTESVVE*YNLLSP
Trigger: TGGAGAAAGGAGATTATACAATTCGACTACAGATTC...AGTGCCAGACAGCTGAATCTTTATCAGGTATTGTAAAGATACACATATGATATG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376052.5
ENST00000651448.1
ENST00000651544.1
ENST00000651748.1
CDS-3UTR CAA 90 bp TCTATGAGAAACAATAAATGGAAGGTCTTTAAGGCGTTCCAAATCACTGATTTGGAATCTGTAGTCGAATaGTATAATCTCCTTTCTCCA +
Preference number: 5 (lower is better)
Translates to: SMRNNKWKVFKAFQITDLESVVE*YNLLSP
Trigger: TGGAGAAAGGAGATTATACAATTCGACTACAGATTC...CAAATCAGTGATTTGGAACGCCTTAAAGACCTTCCATTTATTGTTTCTCATAGA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651448.1
ENST00000651748.1
CDS-3UTR CAA 90 bp TGTATCTTTACAATACCTGATAAAGATTCAGCTGTCTGGCACTTACACATGTATTACGAGGGTGGATTTTaGTTTGTCCATGTCATTTTT +
Preference number: 5 (lower is better)
Translates to: CIFTIPDKDSAVWHLHMYYEGGF*FVHVIF
Trigger: AAAAATGACATGGACAAACAAAAATCCACCCTCGTA...ATACATGTGTAAGTGCCAGACAGCTGAATCTTTATCAGGTATTGTAAAGATACA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376052.5
ENST00000651448.1
ENST00000651544.1
ENST00000651748.1
CDS CCA 72 bp GGCTCCTCAGTCGCAGCGGTGGCCATGGACGCAGGATaGAGGACGAGGAAGCGGCAAACTGCCAGGCTGCGC +
Preference number: 6 (lower is better)
Translates to: GSSVAAVAMDAG*RTRKRQTARLR
Trigger: GCGCAGCCTGGCAGTTTGCCGCTTCCTCGTCCTCCATCCTGCGTCCATGGCCACCGCTGCGACTGAGGAGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376052.5
ENST00000651448.1
CDS TCA 72 bp GAGGCGGCTCCGGTCTCCTTCTTCGGCAGGAGACCGTaGAAAGGGAAGGGCTCCTCAGTCGCAGCGGTGGCC +
Preference number: 6 (lower is better)
Translates to: EAAPVSFFGRRP*KGKGSSVAAVA
Trigger: GGCCACCGCTGCGACTGAGGAGCCCTTCCCTTTTCACGGTCTCCTGCCGAAGAAGGAGACCGGAGCCGCCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000376052.5
ENST00000376065.8
ENST00000490010.1
ENST00000651448.1
ENST00000652308.1
CDS CCA 72 bp GACCGTGAAAAGGGAAGGGCTCCTCAGTCGCAGCGGTaGCCATGGACGCAGGATGGAGGACGAGGAAGCGGC +
Preference number: 6 (lower is better)
Translates to: DREKGRAPQSQR*PWTQDGGRGSG
Trigger: GCCGCTTCCTCGTCCTCCATCCTGCGTCCATGGCCACCGCTGCGACTGAGGAGCCCTTCCCTTTTCACGGTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376052.5
ENST00000376065.8
ENST00000651448.1
CDS CCA 72 bp GAAAAGGGAAGGGCTCCTCAGTCGCAGCGGTGGCCATaGACGCAGGATGGAGGACGAGGAAGCGGCAAACTG +
Preference number: 6 (lower is better)
Translates to: EKGRAPQSQRWP*TQDGGRGSGKL
Trigger: CAGTTTGCCGCTTCCTCGTCCTCCATCCTGCGTCCATGGCCACCGCTGCGACTGAGGAGCCCTTCCCTTTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376052.5
ENST00000376065.8
ENST00000651448.1
CDS GCA 72 bp AAGGGCCCCGTCAGCACCAGAATTTGGCCAGTGAGTTaGTTCTCCGTAACTGTAGTTGACAAGATCACACTT +
Preference number: 6 (lower is better)
Translates to: KGPVSTRIWPVS*FSVTVVDKITL
Trigger: AAGTGTGATCTTGTCAACTACAGTTACGGAGAAGCAACTCACTGGCCAAATTCTGGTGCTGACGGGGCCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652308.1
CDS CAA 90 bp GTCGTTTTGCTGCAGACTGCCCAGCTTTCTTTCCTAGTTCAGTCTTaGACAATGTTAAGGATCCTGCAAGATAGCATCCAGGTCCTGCCC +
Preference number: 6 (lower is better)
Translates to: VVLLQTAQLSFLVQS*TMLRILQDSIQVLP
Trigger: GGGCAGGACCTGGATGCTATCTTGCAGGATCCTTAACATTGTCAAAGACTGAACTAGGAAAGAAAGCTGGGCAGTCTGCAGCAAAACGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376052.5
CDS TCA 72 bp GAAGAATCACTTGAATACAGGAAGCAGAGGTCGAGGTaGGCCGAGATTGTGCCATTGTACTTCAACCTTAAG +
Preference number: 6 (lower is better)
Translates to: EESLEYRKQRSR*AEIVPLYFNLK
Trigger: CTTAAGGTTGAAGTACAATGGCACAATCTCGGCTCACCTCGACCTCTGCTTCCTGTATTCAAGTGATTCTTC
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490010.1
CDS CAA 72 bp CTGCAGACTGCCCAGCTTTCTTTCCTAGTTCAGTCTTaGACAATGTTAAGGATCCTGCAAGATAGCATCCAG +
Preference number: 6 (lower is better)
Translates to: LQTAQLSFLVQS*TMLRILQDSIQ
Trigger: CTGGATGCTATCTTGCAGGATCCTTAACATTGTCAAAGACTGAACTAGGAAAGAAAGCTGGGCAGTCTGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376052.5
CDS CAA 90 bp TGTCAAATTCAGATTCATATAATAGTTCACAAAGTAGTGGGCAGCTaGGAGTTACTTCCCCACTCTTGGGAATGTTTAACTGAGGAGCAG +
Preference number: 6 (lower is better)
Translates to: CQIQIHIIVHKVVGS*ELLPHSWECLTEEQ
Trigger: CTGCTCCTCAGTTAAACATTCCCAAGAGTGGGGAAGTAACTCCAAGCTGCCCACTACTTTGTGAACTATTATATGAATCTGAATTTGACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651544.1
CDS CAA 72 bp CAGATTCATATAATAGTTCACAAAGTAGTGGGCAGCTaGGAGTTACTTCCCCACTCTTGGGAATGTTTAACT +
Preference number: 6 (lower is better)
Translates to: QIHIIVHKVVGS*ELLPHSWECLT
Trigger: AGTTAAACATTCCCAAGAGTGGGGAAGTAACTCCAAGCTGCCCACTACTTTGTGAACTATTATATGAATCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651544.1
CDS CAA 90 bp TACTTATCATCAGGTAAGGAAGTAACAAAGAATGGCTGGTTATATTaGGGTGGTAATGTCAAATTGCTTGATTTCTTCTTCCCTAGAAGT +
Preference number: 6 (lower is better)
Translates to: YLSSGKEVTKNGWLY*GGNVKLLDFFFPRS
Trigger: ACTTCTAGGGAAGAAGAAATCAAGCAATTTGACATTACCACCCAAATATAACCAGCCATTCTTTGTTACTTCCTTACCTGATGATAAGTA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490420.1
CDS CCA 72 bp TACTTATCATCAGGTAAGGAAGTAACAAAGAATGGCTaGTTATATTTGGGTGGTAATGTCAAATTGCTTGAT +
Preference number: 6 (lower is better)
Translates to: YLSSGKEVTKNG*LYLGGNVKLLD
Trigger: ATCAAGCAATTTGACATTACCACCCAAATATAACCAGCCATTCTTTGTTACTTCCTTACCTGATGATAAGTA
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490420.1