RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TPO (Homo sapiens)

Ensembl gene IDs: ENSG00000115705

Ensembl transcript IDs: ENST00000329066.9, ENST00000345913.8, ENST00000346956.7, ENST00000382198.5, ENST00000382201.7, ENST00000382269.7, ENST00000422464.5, ENST00000423320.5, ENST00000425083.3, ENST00000446278.5, ENST00000462973.5, ENST00000469607.3, ENST00000479902.1, ENST00000497517.6, ENST00000539820.5, ENST00000613631.2, ENST00000617910.3, ENST00000622050.4, ENST00000625313.2, ENST00000625793.2, ENST00000626753.2, ENST00000626995.2, ENST00000627010.2, ENST00000627917.2, ENST00000628333.2, ENST00000628844.2, ENST00000629421.1, ENST00000629774.2, ENST00000630089.2, ENST00000630235.2, ENST00000650224.1

Found 1505 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CCCAGGAGAAGAGGGAAGCCAGATGTAGGCCCTGTGGACACCTGGTaGTGGGCAGGGGGTGTGGAAAAACCAGTGCTGGAGGGACCGCCG +
Preference number: 1 (lower is better)
Translates to: PRRRGKPDVGPVDTW*WAGGVEKPVLEGPP
Trigger: CGGCGGTCCCTCCAGCACTGGTTTTTCCACACCCCCTGCCCATCACCAGGTGTCCACAGGGCCTACATCTGGCTTCCCTCTTCTCCTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000329066.9
ENST00000422464.5
3UTR TCA 90 bp CTTTACAGGGTCGCGTGGCTAACGGTGCCCCCGAGACTGCCTTGTTaGGTCAGGGAGGGAGTGAGTTTCCTCCGGGATCACTGGGCTGTG +
Preference number: 1 (lower is better)
Translates to: LYRVAWLTVPPRLPC*VREGVSFLRDHWAV
Trigger: CACAGCCCAGTGATCCCGGAGGAAACTCACTCCCTCCCTGACTCAACAAGGCAGTCTCGGGGGCACCGTTAGCCACGCGACCCTGTAAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329066.9
ENST00000422464.5
3UTR TCA 90 bp GGGATCTGCAATCCGCAGGCAGGGTCCTTCAGGAAGAAGCCGTGCTaGGCACACAGGTCCCTGCGACCACAGATGAACAGAACGCCTGGC +
Preference number: 1 (lower is better)
Translates to: GICNPQAGSFRKKPC*AHRSLRPQMNRTPG
Trigger: GCCAGGCGTTCTGTTCATCTGTGGTCGCAGGGACCTGTGTGCTCAGCACGGCTTCTTCCTGAAGGACCCTGCCTGCGGATTGCAGATCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422464.5
3UTR GCA 90 bp GGAGGGACCGCCGGGGCAGAGTGCAGACGAGCACGGCATCAGAGATaGCAGAAGGTGGAGACAGGAGGATTGCAAGAGTGGTGTTTCCAG +
Preference number: 1 (lower is better)
Translates to: GGTAGAECRRARHQR*QKVETGGLQEWCFQ
Trigger: CTGGAAACACCACTCTTGCAATCCTCCTGTCTCCACCTTCTGGCATCTCTGATGCCGTGCTCGTCTGCACTCTGCCCCGGCGGTCCCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329066.9
ENST00000422464.5
3UTR TCA 90 bp GGCTGGGACCCAGCACTCTGGAATTCAGCTGCTTCACATGTGAAATaGGGACGGCAGCTTTACAGGGTCGCGTGGCTAACGGTGCCCCCG +
Preference number: 1 (lower is better)
Translates to: GWDPALWNSAASHVK*GRQLYRVAWLTVPP
Trigger: CGGGGGCACCGTTAGCCACGCGACCCTGTAAAGCTGCCGTCCTCATTTCACATGTGAAGCAGCTGAATTCCAGAGTGCTGGGTCCCAGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329066.9
ENST00000422464.5
3UTR TCA 90 bp TGCAGTGTCCTGCCACTTTGCCCTCAGAGGGCTCTCGGCAGCCTGTaGGTATCCCGGCCTTCCATCCCAGCACTCTCCTGCAAAAATGCA +
Preference number: 1 (lower is better)
Translates to: CSVLPLCPQRALGSL*VSRPSIPALSCKNA
Trigger: TGCATTTTTGCAGGAGAGTGCTGGGATGGAAGGCCGGGATACTCACAGGCTGCCGAGAGCCCTCTGAGGGCAAAGTGGCAGGACACTGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000422464.5
3UTR CCA 90 bp GGAGGCCACAGAGGATCCACGTGGCAAAGGTTCCTACTCACAGAGTaGGATCTGCAATCCGCAGGCAGGGTCCTTCAGGAAGAAGCCGTG +
Preference number: 1 (lower is better)
Translates to: GGHRGSTWQRFLLTE*DLQSAGRVLQEEAV
Trigger: CACGGCTTCTTCCTGAAGGACCCTGCCTGCGGATTGCAGATCCCACTCTGTGAGTAGGAACCTTTGCCACGTGGATCCTCTGTGGCCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422464.5
3UTR TCA 90 bp TCAGGAAGAAGCCGTGCTGAGCACACAGGTCCCTGCGACCACAGATaGACAGAACGCCTGGCCTTGCCCCTGGTGTCAGTCAGACTAATT +
Preference number: 1 (lower is better)
Translates to: SGRSRAEHTGPCDHR*TERLALPLVSVRLI
Trigger: AATTAGTCTGACTGACACCAGGGGCAAGGCCAGGCGTTCTGTTCATCTGTGGTCGCAGGGACCTGTGTGCTCAGCACGGCTTCTTCCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422464.5
3UTR GCA 90 bp GGTCCTTTTGGTTCCATGCGTGGGAGCCAGGTGCAAAGACGAATGTaGTCTCAGCAGAACGACCCTGGGCTCTGCTTATCTCCGAGGACA +
Preference number: 1 (lower is better)
Translates to: GPFGSMRGSQVQRRM*SQQNDPGLCLSPRT
Trigger: TGTCCTCGGAGATAAGCAGAGCCCAGGGTCGTTCTGCTGAGAGCACATTCGTCTTTGCACCTGGCTCCCACGCATGGAACCAAAAGGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422464.5
3UTR CCA 90 bp CCGGGGCAGAGTGCAGACGAGCACGGCATCAGAGATGCCAGAAGGTaGAGACAGGAGGATTGCAAGAGTGGTGTTTCCAGGGTTCACAAA +
Preference number: 1 (lower is better)
Translates to: PGQSADEHGIRDARR*RQEDCKSGVSRVHK
Trigger: TTTGTGAACCCTGGAAACACCACTCTTGCAATCCTCCTGTCTCCACCTTCTGGCATCTCTGATGCCGTGCTCGTCTGCACTCTGCCCCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329066.9
ENST00000422464.5
3UTR CCA 90 bp CACAAAGAGCCTCACTTCCAGGCCAGGTCCTTTTGGTTCCATGCGTaGGAGCCAGGTGCAAAGACGAATGTGCTCTCAGCAGAACGACCC +
Preference number: 1 (lower is better)
Translates to: HKEPHFQARSFWFHA*EPGAKTNVLSAERP
Trigger: GGGTCGTTCTGCTGAGAGCACATTCGTCTTTGCACCTGGCTCCCACGCATGGAACCAAAAGGACCTGGCCTGGAAGTGAGGCTCTTTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422464.5
3UTR TCA 90 bp AAGGGCCTGGACAGGAGCTCTTTTCACAAAGGACCGCTGGCGAGATaGGCCATCCTTCTTGCTTGTCATGCTGGAGGGAAGTTTCTGGCT +
Preference number: 1 (lower is better)
Translates to: KGLDRSSFHKGPLAR*AILLACHAGGKFLA
Trigger: AGCCAGAAACTTCCCTCCAGCATGACAAGCAAGAAGGATGGCTCATCTCGCCAGCGGTCCTTTGTGAAAAGAGCTCCTGTCCAGGCCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422464.5
3UTR CCA 90 bp CAAGACAGAAGGGCCTGGACAGGAGCTCTTTTCACAAAGGACCGCTaGCGAGATGAGCCATCCTTCTTGCTTGTCATGCTGGAGGGAAGT +
Preference number: 1 (lower is better)
Translates to: QDRRAWTGALFTKDR*RDEPSFLLVMLEGS
Trigger: ACTTCCCTCCAGCATGACAAGCAAGAAGGATGGCTCATCTCGCCAGCGGTCCTTTGTGAAAAGAGCTCCTGTCCAGGCCCTTCTGTCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422464.5
3UTR GCA 90 bp AATTCACAAAGAGCCTCACTTCCAGGCCAGGTCCTTTTGGTTCCATaGGTGGGAGCCAGGTGCAAAGACGAATGTGCTCTCAGCAGAACG +
Preference number: 1 (lower is better)
Translates to: NSQRASLPGQVLLVP*VGARCKDECALSRT
Trigger: CGTTCTGCTGAGAGCACATTCGTCTTTGCACCTGGCTCCCACGCATGGAACCAAAAGGACCTGGCCTGGAAGTGAGGCTCTTTGTGAATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422464.5
3UTR GCA 90 bp TGTCATGCTGGAGGGAAGTTTCTGGCTTCCGGACAAATGCTTGTTTaGAGGAGGCCACAGAGGATCCACGTGGCAAAGGTTCCTACTCAC +
Preference number: 1 (lower is better)
Translates to: CHAGGKFLASGQMLV*RRPQRIHVAKVPTH
Trigger: GTGAGTAGGAACCTTTGCCACGTGGATCCTCTGTGGCCTCCTGCAAACAAGCATTTGTCCGGAAGCCAGAAACTTCCCTCCAGCATGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422464.5
3UTR GCA 90 bp TTTGGAAAAGAGTCGTACGGTGATTTTGGGAACATGAAGCTGTTCTaGAGTGTCCTGCCACTTTGCCCTCAGAGGGCTCTCGGCAGCCTG +
Preference number: 1 (lower is better)
Translates to: FGKESYGDFGNMKLF*SVLPLCPQRALGSL
Trigger: CAGGCTGCCGAGAGCCCTCTGAGGGCAAAGTGGCAGGACACTGCAGAACAGCTTCATGTTCCCAAAATCACCGTACGACTCTTTTCCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422464.5
3UTR CCA 90 bp GGAGGCAGAAGCCTGGGGTCTGAGGCTCATGTGTTGGTGAATCTCTaGAGGATGAGACAAGTCACTTTGCCTTGTTGGTCCTTAAGGCTC +
Preference number: 1 (lower is better)
Translates to: GGRSLGSEAHVLVNL*RMRQVTLPCWSLRL
Trigger: GAGCCTTAAGGACCAACAAGGCAAAGTGACTTGTCTCATCCTCCAGAGATTCACCAACACATGAGCCTCAGACCCCAGGCTTCTGCCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329066.9
ENST00000422464.5
3UTR CCA 90 bp CGAGATGAGCCATCCTTCTTGCTTGTCATGCTGGAGGGAAGTTTCTaGCTTCCGGACAAATGCTTGTTTGCAGGAGGCCACAGAGGATCC +
Preference number: 1 (lower is better)
Translates to: RDEPSFLLVMLEGSF*LPDKCLFAGGHRGS
Trigger: GGATCCTCTGTGGCCTCCTGCAAACAAGCATTTGTCCGGAAGCCAGAAACTTCCCTCCAGCATGACAAGCAAGAAGGATGGCTCATCTCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422464.5
3UTR CCA 90 bp GACTGCTCCAGTAACAGCACACACTTGATACAAGACAGAAGGGCCTaGACAGGAGCTCTTTTCACAAAGGACCGCTGGCGAGATGAGCCA +
Preference number: 1 (lower is better)
Translates to: DCSSNSTHLIQDRRA*TGALFTKDRWRDEP
Trigger: TGGCTCATCTCGCCAGCGGTCCTTTGTGAAAAGAGCTCCTGTCCAGGCCCTTCTGTCTTGTATCAAGTGTGTGCTGTTACTGGAGCAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422464.5
3UTR TCA 90 bp ATTTGCCTGTGTTTGGAAAAGAGTCGTACGGTGATTTTGGGAACATaGAGCTGTTCTGCAGTGTCCTGCCACTTTGCCCTCAGAGGGCTC +
Preference number: 1 (lower is better)
Translates to: ICLCLEKSRTVILGT*SCSAVSCHFALRGL
Trigger: GAGCCCTCTGAGGGCAAAGTGGCAGGACACTGCAGAACAGCTTCATGTTCCCAAAATCACCGTACGACTCTTTTCCAAACACAGGCAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422464.5
3UTR GCA 90 bp CAGGTGCAAAGACGAATGTGCTCTCAGCAGAACGACCCTGGGCTCTaGTTATCTCCGAGGACAGGATCTAATCTCACACTGAATTTCAGA +
Preference number: 1 (lower is better)
Translates to: QVQRRMCSQQNDPGL*LSPRTGSNLTLNFR
Trigger: TCTGAAATTCAGTGTGAGATTAGATCCTGTCCTCGGAGATAAGCAGAGCCCAGGGTCGTTCTGCTGAGAGCACATTCGTCTTTGCACCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422464.5
3UTR TCA 90 bp CCTGCTGATTTCGGATTTGCCTGTGTTTGGAAAAGAGTCGTACGGTaGTTTTGGGAACATGAAGCTGTTCTGCAGTGTCCTGCCACTTTG +
Preference number: 1 (lower is better)
Translates to: PADFGFACVWKRVVR*FWEHEAVLQCPATL
Trigger: CAAAGTGGCAGGACACTGCAGAACAGCTTCATGTTCCCAAAATCACCGTACGACTCTTTTCCAAACACAGGCAAATCCGAAATCAGCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000469607.3
3UTR GCA 90 bp AGAAGGAACAAATCAGGCAATGTTTACAAGAAAAGGCCAGACAAATaGAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGAC +
Preference number: 1 (lower is better)
Translates to: RRNKSGNVYKKRPDK*SYNIYSSMPESNYD
Trigger: GTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATTTGTCTGGCCTTTTCTTGTAAACATTGCCTGATTTGTTCCTTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
3UTR-3UTR GCA 90 bp GAAATGAGGACGGCAGCTTTACAGGGTCGCGTGGCTAACGGTGCCCCCGAGACTGTGCGGCAGGGCGGCTaGTGGAGGCAGAAGCCTGGG +
Preference number: 2 (lower is better)
Translates to: EMRTAALQGRVANGAPETVRQGG*WRQKPG
Trigger: CCCAGGCTTCTGCCTCCAGCAGCCGCCCTGCCGCAC...AGTCTCGGGGGCACCGTTAGCCACGCGACCCTGTAAAGCTGCCGTCCTCATTTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329066.9
ENST00000422464.5
3UTR CAA 90 bp GCAGCTTTACAGGGTCGCGTGGCTAACGGTGCCCCCGAGACTGCCTaGTTGAGTCAGGGAGGGAGTGAGTTTCCTCCGGGATCACTGGGC +
Preference number: 2 (lower is better)
Translates to: AALQGRVANGAPETA*LSQGGSEFPPGSLG
Trigger: GCCCAGTGATCCCGGAGGAAACTCACTCCCTCCCTGACTCAACAAGGCAGTCTCGGGGGCACCGTTAGCCACGCGACCCTGTAAAGCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329066.9
ENST00000422464.5
3UTR CAA 90 bp GCTTTACAGGGTCGCGTGGCTAACGGTGCCCCCGAGACTGCCTTGTaGAGTCAGGGAGGGAGTGAGTTTCCTCCGGGATCACTGGGCTGT +
Preference number: 2 (lower is better)
Translates to: ALQGRVANGAPETAL*SQGGSEFPPGSLGC
Trigger: ACAGCCCAGTGATCCCGGAGGAAACTCACTCCCTCCCTGACTCAACAAGGCAGTCTCGGGGGCACCGTTAGCCACGCGACCCTGTAAAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329066.9
ENST00000422464.5
3UTR-3UTR CCA 90 bp GGCAAAGGTTCCTACTCACAGAGTGGGATCTGCAATCCGCAGGCAGGGTCCTTCGCCCAGGGGACTTGCTaGCACTGCCCTTGCTGTGGC +
Preference number: 2 (lower is better)
Translates to: GKGSYSQSGICNPQAGSFAQGTC*HCPCCG
Trigger: GCCACAGCAAGGGCAGTGCCAGCAAGTCCCCTGGGC...GAAGGACCCTGCCTGCGGATTGCAGATCCCACTCTGTGAGTAGGAACCTTTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422464.5
3UTR-3UTR GCA 90 bp AAGTTTCTGGCTTCCGGACAAATGCTTGTTTGCAGGAGGCCACAGAGGATCCACCGGTGCCCCCGAGACTaGCTTGTTGAGTCAGGGAGG +
Preference number: 2 (lower is better)
Translates to: KFLASGQMLVCRRPQRIHRCPRD*LVESGR
Trigger: CCTCCCTGACTCAACAAGGCAGTCTCGGGGGCACCG...GTGGATCCTCTGTGGCCTCCTGCAAACAAGCATTTGTCCGGAAGCCAGAAACTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000422464.5
3UTR-3UTR GCA 90 bp GAAATGAGGACGGCAGCTTTACAGGGTCGCGTGGCTAACGGTGCCCCCGAGACTGGACAAATGCTTGTTTaGAGGAGGCCACAGAGGATC +
Preference number: 2 (lower is better)
Translates to: EMRTAALQGRVANGAPETGQMLV*RRPQRI
Trigger: GATCCTCTGTGGCCTCCTGCAAACAAGCATTTGTCC...AGTCTCGGGGGCACCGTTAGCCACGCGACCCTGTAAAGCTGCCGTCCTCATTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000422464.5
3UTR-3UTR CCA 90 bp GAAATGAGGACGGCAGCTTTACAGGGTCGCGTGGCTAACGGTGCCCCCGAGACTAGAGATGCCAGAAGGTaGAGACAGGAGGATTGCAAG +
Preference number: 2 (lower is better)
Translates to: EMRTAALQGRVANGAPETRDARR*RQEDCK
Trigger: CTTGCAATCCTCCTGTCTCCACCTTCTGGCATCTCT...AGTCTCGGGGGCACCGTTAGCCACGCGACCCTGTAAAGCTGCCGTCCTCATTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329066.9
ENST00000422464.5
3UTR-3UTR CCA 90 bp AGGACGGCAGCTTTACAGGGTCGCGTGGCTAACGGTGCCCCCGAGACTGCCTTGGTGTTGGTGAATCTCTaGAGGATGAGACAAGTCACT +
Preference number: 2 (lower is better)
Translates to: RTAALQGRVANGAPETALVLVNL*RMRQVT
Trigger: AGTGACTTGTCTCATCCTCCAGAGATTCACCAACAC...CAAGGCAGTCTCGGGGGCACCGTTAGCCACGCGACCCTGTAAAGCTGCCGTCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329066.9
ENST00000422464.5
3UTR-3UTR TCA 90 bp CAGGAGAAGAGGGAAGCCAGATGTAGGCCCTGTGGACACCTGGTGATGGGCAGGGTGATTTTGGGAACATaGAGCTGTTCTGCAGTGTCC +
Preference number: 2 (lower is better)
Translates to: QEKREARCRPCGHLVMGRVILGT*SCSAVS
Trigger: GGACACTGCAGAACAGCTTCATGTTCCCAAAATCAC...CCTGCCCATCACCAGGTGTCCACAGGGCCTACATCTGGCTTCCCTCTTCTCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329066.9
ENST00000422464.5
3UTR-3UTR TCA 90 bp ATGAGGACGGCAGCTTTACAGGGTCGCGTGGCTAACGGTGCCCCCGAGACTGCCAAAAGAGTCGTACGGTaGTTTTGGGAACATGAAGCT +
Preference number: 2 (lower is better)
Translates to: MRTAALQGRVANGAPETAKRVVR*FWEHEA
Trigger: AGCTTCATGTTCCCAAAATCACCGTACGACTCTTTT...GGCAGTCTCGGGGGCACCGTTAGCCACGCGACCCTGTAAAGCTGCCGTCCTCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000329066.9
ENST00000422464.5
3UTR-3UTR TCA 90 bp TGGGATCTGCAATCCGCAGGCAGGGTCCTTCAGGAAGAAGCCGTGCTGAGCACAAAACAGTCGTCCTGCTaGTTTCGGATTTGCCTGTGT +
Preference number: 2 (lower is better)
Translates to: WDLQSAGRVLQEEAVLSTKQSSC*FRICLC
Trigger: ACACAGGCAAATCCGAAATCAGCAGGACGACTGTTT...TGTGCTCAGCACGGCTTCTTCCTGAAGGACCCTGCCTGCGGATTGCAGATCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422464.5
3UTR-3UTR GCA 90 bp GTTGGTGAATCTCTGGAGGATGAGACAAGTCACTTTGCCTTGTTGGTCCTTAAGACCGCCGGGGCAGAGTaGAGACGAGCACGGCATCAG +
Preference number: 2 (lower is better)
Translates to: VGESLEDETSHFALLVLKTAGAE*RRARHQ
Trigger: CTGATGCCGTGCTCGTCTGCACTCTGCCCCGGCGGT...CTTAAGGACCAACAAGGCAAAGTGACTTGTCTCATCCTCCAGAGATTCACCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329066.9
ENST00000422464.5
3UTR-3UTR GCA 90 bp AATCTCTGGAGGATGAGACAAGTCACTTTGCCTTGTTGGTCCTTAAGGCTCCAGGTGTGGAAAAACCAGTaGTGGAGGGACCGCCGGGGC +
Preference number: 2 (lower is better)
Translates to: NLWRMRQVTLPCWSLRLQVWKNQ*WRDRRG
Trigger: GCCCCGGCGGTCCCTCCAGCACTGGTTTTTCCACAC...CTGGAGCCTTAAGGACCAACAAGGCAAAGTGACTTGTCTCATCCTCCAGAGATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329066.9
ENST00000422464.5
3UTR-3UTR GCA 90 bp GAGACAAGTCACTTTGCCTTGTTGGTCCTTAAGGCTCCAGCCTCTCCCTCAGAAGCAGGAAGCCAGGAGTaGTCTTCCCAGGAGAAGAGG +
Preference number: 2 (lower is better)
Translates to: ETSHFALLVLKAPASPSEAGSQE*SSQEKR
Trigger: CCTCTTCTCCTGGGAAGAGCACTCCTGGCTTCCTGC...TTCTGAGGGAGAGGCTGGAGCCTTAAGGACCAACAAGGCAAAGTGACTTGTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329066.9
ENST00000422464.5
3UTR-3UTR GCA 90 bp GTGTCTGAGTTTGCTTTCAATGCCGAAGGACTCCTAACTATTGCCTTGCGTGAGGGAGTAAGAGCAGTGTaGGGCAGGGCGGCTGCTGGA +
Preference number: 2 (lower is better)
Translates to: VSEFAFNAEGLLTIALREGVRAV*GRAAAG
Trigger: TCCAGCAGCCGCCCTGCCGCACACTGCTCTTACTCC...CTCACGCAAGGCAATAGTTAGGAGTCCTTCGGCATTGAAAGCAAACTCAGACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329066.9
ENST00000422464.5
3UTR-3UTR GCA 90 bp GAGACAAGTCACTTTGCCTTGTTGGTCCTTAAGGCTCCAGCCTCTCCCTCAGAAGGGACTTGCTGGCACTaGCCTTGCTGTGGCTGGAAA +
Preference number: 2 (lower is better)
Translates to: ETSHFALLVLKAPASPSEGTCWH*PCCGWK
Trigger: TTTCCAGCCACAGCAAGGGCAGTGCCAGCAAGTCCC...TTCTGAGGGAGAGGCTGGAGCCTTAAGGACCAACAAGGCAAAGTGACTTGTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422464.5
3UTR-3UTR CCA 90 bp ACACTTGATACAAGACAGAAGGGCCTGGACAGGAGCTCTTTTCACAAAGGACCGGATGGGCAGGGGGTGTaGAAAAACCAGTGCTGGAGG +
Preference number: 2 (lower is better)
Translates to: TLDTRQKGLDRSSFHKGPDGQGV*KNQCWR
Trigger: CCTCCAGCACTGGTTTTTCCACACCCCCTGCCCATC...CGGTCCTTTGTGAAAAGAGCTCCTGTCCAGGCCCTTCTGTCTTGTATCAAGTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000422464.5
3UTR-3UTR CCA 90 bp AGTCACTTTGCCTTGTTGGTCCTTAAGGCTCCAGCCTCTCCCTCAGAATCACTTGATGAACAGAACGCCTaGCCTTGCCCCTGGTGTCAG +
Preference number: 2 (lower is better)
Translates to: SHFALLVLKAPASPSESLDEQNA*PCPWCQ
Trigger: CTGACACCAGGGGCAAGGCCAGGCGTTCTGTTCATC...AAGTGATTCTGAGGGAGAGGCTGGAGCCTTAAGGACCAACAAGGCAAAGTGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422464.5
3UTR-3UTR GCA 90 bp ACAAATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACATGGGTGCGGCAGGGCGGCTaGTGGAGGCAGAAGCCTGGG +
Preference number: 2 (lower is better)
Translates to: TNAAITFIHPCLRVTTTWVRQGG*WRQKPG
Trigger: CCCAGGCTTCTGCCTCCAGCAGCCGCCCTGCCGCAC...CCATGTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATTTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329066.9
ENST00000422464.5
3UTR-3UTR CCA 90 bp CCTGGACAGGAGCTCTTTTCACAAAGGACCGCTGGCGAGATGAGCCATCCTTCTGGAGGATTGCAAGAGTaGTGTTTCCAGGGTTCACAA +
Preference number: 2 (lower is better)
Translates to: PGQELFSQRTAGEMSHPSGGLQE*CFQGSQ
Trigger: TTGTGAACCCTGGAAACACCACTCTTGCAATCCTCC...AGAAGGATGGCTCATCTCGCCAGCGGTCCTTTGTGAAAAGAGCTCCTGTCCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422464.5
3UTR-3UTR CCA 90 bp ACACAGAACAGGATGGCCTGGCACCTAGGGAAAACAACAGTCTGGTATTTTTGGTTCCTCCGGGATCACTaGGCTGTGTTCCCCGTGAGT +
Preference number: 2 (lower is better)
Translates to: TQNRMAWHLGKTTVWYFWFLRDH*AVFPVS
Trigger: ACTCACGGGGAACACAGCCCAGTGATCCCGGAGGAA...CCAAAAATACCAGACTGTTGTTTTCCCTAGGTGCCAGGCCATCCTGTTCTGTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000329066.9
ENST00000422464.5
3UTR CAA 90 bp GAGGCTCATGTGTTGGTGAATCTCTGGAGGATGAGACAAGTCACTTaGCCTTGTTGGTCCTTAAGGCTCCAGCCTCTCCCTCAGAATCAC +
Preference number: 2 (lower is better)
Translates to: EAHVLVNLWRMRQVT*PCWSLRLQPLPQNH
Trigger: GTGATTCTGAGGGAGAGGCTGGAGCCTTAAGGACCAACAAGGCAAAGTGACTTGTCTCATCCTCCAGAGATTCACCAACACATGAGCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329066.9
ENST00000422464.5
3UTR CAA 90 bp CTCTTTTCACAAAGGACCGCTGGCGAGATGAGCCATCCTTCTTGCTaGTCATGCTGGAGGGAAGTTTCTGGCTTCCGGACAAATGCTTGT +
Preference number: 2 (lower is better)
Translates to: LFSQRTAGEMSHPSC*SCWREVSGFRTNAC
Trigger: ACAAGCATTTGTCCGGAAGCCAGAAACTTCCCTCCAGCATGACAAGCAAGAAGGATGGCTCATCTCGCCAGCGGTCCTTTGTGAAAAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422464.5
3UTR-3UTR TCA 90 bp AATCTCTGGAGGATGAGACAAGTCACTTTGCCTTGTTGGTCCTTAAGGCTCCAGCAGAAGCCTGGGGTCTaGGGCTCATGTGTTGGTGAA +
Preference number: 2 (lower is better)
Translates to: NLWRMRQVTLPCWSLRLQQKPGV*GSCVGE
Trigger: TTCACCAACACATGAGCCTCAGACCCCAGGCTTCTG...CTGGAGCCTTAAGGACCAACAAGGCAAAGTGACTTGTCTCATCCTCCAGAGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329066.9
ENST00000422464.5
3UTR-3UTR GCA 90 bp GTGCTTCCAGCCGATCCTCAGATTAAGTGGAAGCAAACGCCTGAAAGTGAGCCCAACATGAAGCTGTTCTaGAGTGTCCTGCCACTTTGC +
Preference number: 2 (lower is better)
Translates to: VLPADPQIKWKQTPESEPNMKLF*SVLPLC
Trigger: GCAAAGTGGCAGGACACTGCAGAACAGCTTCATGTT...GGGCTCACTTTCAGGCGTTTGCTTCCACTTAATCTGAGGATCGGCTGGAAGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422464.5
3UTR-3UTR GCA 90 bp GATTTGCCTGTGTTTGGAAAAGAGTCGTACGGTGATTTTGGGAACATGAAGCTGCAGAACGCCTGGCCTTaGCCCTGGTGTCAGTCAGAC +
Preference number: 2 (lower is better)
Translates to: DLPVFGKESYGDFGNMKLQNAWP*PWCQSD
Trigger: GTCTGACTGACACCAGGGGCAAGGCCAGGCGTTCTG...CAGCTTCATGTTCCCAAAATCACCGTACGACTCTTTTCCAAACACAGGCAAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422464.5
3UTR CAA 90 bp AGCTATTTAAATTCACAAAGAGCCTCACTTCCAGGCCAGGTCCTTTaGGTTCCATGCGTGGGAGCCAGGTGCAAAGACGAATGTGCTCTC +
Preference number: 2 (lower is better)
Translates to: SYLNSQRASLPGQVL*VPCVGARCKDECAL
Trigger: GAGAGCACATTCGTCTTTGCACCTGGCTCCCACGCATGGAACCAAAAGGACCTGGCCTGGAAGTGAGGCTCTTTGTGAATTTAAATAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422464.5
3UTR-3UTR TCA 90 bp ACACTTGATACAAGACAGAAGGGCCTGGACAGGAGCTCTTTTCACAAAGGACCGCAGCTGCTTCACATGTaGAATGAGGACGGCAGCTTT +
Preference number: 2 (lower is better)
Translates to: TLDTRQKGLDRSSFHKGPQLLHM*NEDGSF
Trigger: AAAGCTGCCGTCCTCATTTCACATGTGAAGCAGCTG...CGGTCCTTTGTGAAAAGAGCTCCTGTCCAGGCCCTTCTGTCTTGTATCAAGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422464.5
3UTR-3UTR TCA 90 bp ACACTTGATACAAGACAGAAGGGCCTGGACAGGAGCTCTTTTCACAAAGGACCGGTTGTCATTCGTGGGTaGGATCATTCAGTGCTGCCT +
Preference number: 2 (lower is better)
Translates to: TLDTRQKGLDRSSFHKGPVVIRG*DHSVLP
Trigger: AGGCAGCACTGAATGATCTCACCCACGAATGACAAC...CGGTCCTTTGTGAAAAGAGCTCCTGTCCAGGCCCTTCTGTCTTGTATCAAGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422464.5
3UTR-3UTR TCA 90 bp ACAATGTGTGAAGCCTTGAACGTAGGAGATTTTAGATCCAGATGCTGTGAATTCCTCACTGCTGCCGGCTaGGGCCCTGGTCTTGAGGTT +
Preference number: 2 (lower is better)
Translates to: TMCEALNVGDFRSRCCEFLTAAG*GPGLEV
Trigger: AACCTCAAGACCAGGGCCTCAGCCGGCAGCAGTGAG...GAATTCACAGCATCTGGATCTAAAATCTCCTACGTTCAAGGCTTCACACATTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382269.7
ENST00000539820.5
ENST00000617910.3
ENST00000629774.2
3UTR-3UTR CCA 90 bp AGCAGGAACTCACTGCTGCCGGCTGAGGCCCTGGTCTTGAGGTTGTTAAAATGTCAGTTTCGCATTATTTaGTCTGTCCTGCTGGAAGGT +
Preference number: 2 (lower is better)
Translates to: SRNSLLPAEALVLRLLKCQFRII*SVLLEG
Trigger: ACCTTCCAGCAGGACAGACCAAATAATGCGAAACTG...ACATTTTAACAACCTCAAGACCAGGGCCTCAGCCGGCAGCAGTGAGTTCCTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382269.7
ENST00000539820.5
ENST00000617910.3
ENST00000629774.2
3UTR CAA 90 bp TCATGTGTTGGTGAATCTCTGGAGGATGAGACAAGTCACTTTGCCTaGTTGGTCCTTAAGGCTCCAGCCTCTCCCTCAGAATCACTTTCC +
Preference number: 2 (lower is better)
Translates to: SCVGESLEDETSHFA*LVLKAPASPSESLS
Trigger: GGAAAGTGATTCTGAGGGAGAGGCTGGAGCCTTAAGGACCAACAAGGCAAAGTGACTTGTCTCATCCTCCAGAGATTCACCAACACATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329066.9
ENST00000422464.5
3UTR-3UTR GCA 90 bp AGTCACTTTGCCTTGTTGGTCCTTAAGGCTCCAGCCTCTCCCTCAGAATCACTTGGTGAGATCATTCAGTaGTGCCTCGATGGTCTGTTT +
Preference number: 2 (lower is better)
Translates to: SHFALLVLKAPASPSESLGEIIQ*CLDGLF
Trigger: AAACAGACCATCGAGGCAGCACTGAATGATCTCACC...AAGTGATTCTGAGGGAGAGGCTGGAGCCTTAAGGACCAACAAGGCAAAGTGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329066.9
ENST00000422464.5
3UTR-3UTR CCA 90 bp AATCTCTGGAGGATGAGACAAGTCACTTTGCCTTGTTGGTCCTTAAGGCTCCAGTGGGACCCAGCACTCTaGAATTCAGCTGCTTCACAT +
Preference number: 2 (lower is better)
Translates to: NLWRMRQVTLPCWSLRLQWDPAL*NSAASH
Trigger: ATGTGAAGCAGCTGAATTCCAGAGTGCTGGGTCCCA...CTGGAGCCTTAAGGACCAACAAGGCAAAGTGACTTGTCTCATCCTCCAGAGATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329066.9
ENST00000422464.5
3UTR-3UTR CCA 90 bp GAATCTCTGGAGGATGAGACAAGTCACTTTGCCTTGTTGGTCCTTAAGGCTCCACACAGAGGATCCACGTaGCAAAGGTTCCTACTCACA +
Preference number: 2 (lower is better)
Translates to: ESLEDETSHFALLVLKAPHRGST*QRFLLT
Trigger: TGTGAGTAGGAACCTTTGCCACGTGGATCCTCTGTG...TGGAGCCTTAAGGACCAACAAGGCAAAGTGACTTGTCTCATCCTCCAGAGATTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422464.5
3UTR-3UTR TCA 90 bp ACACAGAACAGGATGGCCTGGCACCTAGGGAAAACAACAGTCTGGTATTTTTGGGTGATTTTGGGAACATaGAGCTGTTCTGCAGTGTCC +
Preference number: 2 (lower is better)
Translates to: TQNRMAWHLGKTTVWYFWVILGT*SCSAVS
Trigger: GGACACTGCAGAACAGCTTCATGTTCCCAAAATCAC...CCAAAAATACCAGACTGTTGTTTTCCCTAGGTGCCAGGCCATCCTGTTCTGTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000329066.9
ENST00000422464.5
3UTR-3UTR TCA 90 bp AATCTCTGGAGGATGAGACAAGTCACTTTGCCTTGTTGGTCCTTAAGGCTCCAGCAGGTCAGATGTGTCTaGGTTTGCTTTCAATGCCGA +
Preference number: 2 (lower is better)
Translates to: NLWRMRQVTLPCWSLRLQQVRCV*VCFQCR
Trigger: TCGGCATTGAAAGCAAACTCAGACACATCTGACCTG...CTGGAGCCTTAAGGACCAACAAGGCAAAGTGACTTGTCTCATCCTCCAGAGATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329066.9
ENST00000422464.5
3UTR-3UTR CCA 90 bp CTGTGCTTCCAGCCGATCCTCAGATTAAGTGGAAGCAAACGCCTGAAAGTGAGCACCGGTTTGTACAAATaGAAGGCATCTTCATTCCTC +
Preference number: 2 (lower is better)
Translates to: LCFQPILRLSGSKRLKVSTGLYK*KASSFL
Trigger: GAGGAATGAAGATGCCTTCCATTTGTACAAACCGGT...GCTCACTTTCAGGCGTTTGCTTCCACTTAATCTGAGGATCGGCTGGAAGCACAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422464.5
ENST00000625793.2
3UTR-3UTR CCA 90 bp AAGTTTCTGGCTTCCGGACAAATGCTTGTTTGCAGGAGGCCACAGAGGATCCACTATTATTTTAGTGGGTaGCTGTGGTCCCAGCACTTT +
Preference number: 2 (lower is better)
Translates to: KFLASGQMLVCRRPQRIHYYFSG*LWSQHF
Trigger: AAAGTGCTGGGACCACAGCCACCCACTAAAATAATA...GTGGATCCTCTGTGGCCTCCTGCAAACAAGCATTTGTCCGGAAGCCAGAAACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422464.5
3UTR-3UTR TCA 90 bp AGTAACTACGACATGGTACTAGATTTACCCGTGTTGGGAAAACAGTCGTCCTGCGTGATTTTGGGAACATaGAGCTGTTCTGCAGTGTCC +
Preference number: 2 (lower is better)
Translates to: SNYDMVLDLPVLGKQSSCVILGT*SCSAVS
Trigger: GGACACTGCAGAACAGCTTCATGTTCCCAAAATCAC...GCAGGACGACTGTTTTCCCAACACGGGTAAATCTAGTACCATGTCGTAGTTACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000469607.3
3UTR-3UTR TCA 90 bp TCACTGCTGCCGGCTGAGGCCCTGGTCTTGAGGTTGTTAAAATGTAAACTTAGGATTGGAGAAAAGCTTTaGCTGGCTTCAGTTTCGCAT +
Preference number: 2 (lower is better)
Translates to: SLLPAEALVLRLLKCKLRIGEKL*LASVSH
Trigger: ATGCGAAACTGAAGCCAGTCAAAGCTTTTCTCCAAT...CCTAAGTTTACATTTTAACAACCTCAAGACCAGGGCCTCAGCCGGCAGCAGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382269.7
ENST00000539820.5
ENST00000617910.3
ENST00000629774.2
3UTR-3UTR TCA 90 bp AGCAGGAACTCACTGCTGCCGGCTGAGGCCCTGGTCTTGAGGTTGTTAAAATGTAGTGATCATGATTTATaGATCAGGAAGCATCAAACC +
Preference number: 2 (lower is better)
Translates to: SRNSLLPAEALVLRLLKCSDHDL*IRKHQT
Trigger: GGTTTGATGCTTCCTGATTCATAAATCATGATCACT...ACATTTTAACAACCTCAAGACCAGGGCCTCAGCCGGCAGCAGTGAGTTCCTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382269.7
ENST00000539820.5
ENST00000617910.3
ENST00000629774.2
3UTR-3UTR TCA 90 bp GAATCTCTGGAGGATGAGACAAGTCACTTTGCCTTGTTGGTCCTTAAGGCTCCAGATCTAATCTCACACTaGATTTCAGAAGGGAGACCG +
Preference number: 2 (lower is better)
Translates to: ESLEDETSHFALLVLKAPDLISH*ISEGRP
Trigger: CGGTCTCCCTTCTGAAATTCAGTGTGAGATTAGATC...TGGAGCCTTAAGGACCAACAAGGCAAAGTGACTTGTCTCATCCTCCAGAGATTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422464.5
3UTR-3UTR GCA 90 bp CTACGACATGGTACTAGATTTACCCGTGTTGGGAAAACAGTCGTCCTGCTGATTAACATGAAGCTGTTCTaGAGTGTCCTGCCACTTTGC +
Preference number: 2 (lower is better)
Translates to: LRHGTRFTRVGKTVVLLINMKLF*SVLPLC
Trigger: GCAAAGTGGCAGGACACTGCAGAACAGCTTCATGTT...AATCAGCAGGACGACTGTTTTCCCAACACGGGTAAATCTAGTACCATGTCGTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000469607.3
3UTR-3UTR GCA 90 bp ACTAGATTTACCCGTGTTGGGAAAACAGTCGTCCTGCTGATTTCGGATTTGCCTAACATGAAGCTGTTCTaGAGTGTCCTGCCACTTTGC +
Preference number: 2 (lower is better)
Translates to: TRFTRVGKTVVLLISDLPNMKLF*SVLPLC
Trigger: GCAAAGTGGCAGGACACTGCAGAACAGCTTCATGTT...AGGCAAATCCGAAATCAGCAGGACGACTGTTTTCCCAACACGGGTAAATCTAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000469607.3
3UTR-3UTR GCA 90 bp GAGAGTAACTACGACATGGTACTAGATTTACCCGTGTTGGGAAAACAGTCGTCCAACATGAAGCTGTTCTaGAGTGTCCTGCCACTTTGC +
Preference number: 2 (lower is better)
Translates to: ESNYDMVLDLPVLGKQSSNMKLF*SVLPLC
Trigger: GCAAAGTGGCAGGACACTGCAGAACAGCTTCATGTT...GGACGACTGTTTTCCCAACACGGGTAAATCTAGTACCATGTCGTAGTTACTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000469607.3
3UTR-3UTR CCA 90 bp GATTTGCCTGTGTTTGGAAAAGAGTCGTACGGTGATTTTGGGAACATGAAGCTGCAGAACAGGATGGCCTaGCACCTAGGGAAAACAACA +
Preference number: 2 (lower is better)
Translates to: DLPVFGKESYGDFGNMKLQNRMA*HLGKTT
Trigger: TGTTGTTTTCCCTAGGTGCCAGGCCATCCTGTTCTG...CAGCTTCATGTTCCCAAAATCACCGTACGACTCTTTTCCAAACACAGGCAAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000329066.9
ENST00000422464.5
3UTR-3UTR GCA 90 bp GATTTGCCTGTGTTTGGAAAAGAGTCGTACGGTGATTTTGGGAACATGAAGCTGGGTGAGATCATTCAGTaGTGCCTCGATGGTCTGTTT +
Preference number: 2 (lower is better)
Translates to: DLPVFGKESYGDFGNMKLGEIIQ*CLDGLF
Trigger: AAACAGACCATCGAGGCAGCACTGAATGATCTCACC...CAGCTTCATGTTCCCAAAATCACCGTACGACTCTTTTCCAAACACAGGCAAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329066.9
ENST00000422464.5
3UTR-3UTR TCA 90 bp TATTCATCCATGCCTGAGAGTAACTACGACATGGTACTAGATTTACCCGTGTTGAAACAGTCGTCCTGCTaGTTTCGGATTTGCCTGTGT +
Preference number: 2 (lower is better)
Translates to: YSSMPESNYDMVLDLPVLKQSSC*FRICLC
Trigger: ACACAGGCAAATCCGAAATCAGCAGGACGACTGTTT...CAACACGGGTAAATCTAGTACCATGTCGTAGTTACTCTCAGGCATGGATGAATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000469607.3
3UTR-3UTR CCA 90 bp ACAAATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACATGGGTCACTTTGCCTTGTTaGTCCTTAAGGCTCCAGCCT +
Preference number: 2 (lower is better)
Translates to: TNAAITFIHPCLRVTTTWVTLPC*SLRLQP
Trigger: AGGCTGGAGCCTTAAGGACCAACAAGGCAAAGTGAC...CCATGTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329066.9
ENST00000422464.5
3UTR-3UTR CCA 90 bp AATCTCTGGAGGATGAGACAAGTCACTTTGCCTTGTTGGTCCTTAAGGCTCCAGGGGAAAACAACAGTCTaGTATTTTTGGGTCACAAAA +
Preference number: 2 (lower is better)
Translates to: NLWRMRQVTLPCWSLRLQGKTTV*YFWVTK
Trigger: TTTTGTGACCCAAAAATACCAGACTGTTGTTTTCCC...CTGGAGCCTTAAGGACCAACAAGGCAAAGTGACTTGTCTCATCCTCCAGAGATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000329066.9
ENST00000422464.5
3UTR-3UTR TCA 90 bp ACAAATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACATGGGTGATTTTGGGAACATaGAGCTGTTCTGCAGTGTCC +
Preference number: 2 (lower is better)
Translates to: TNAAITFIHPCLRVTTTWVILGT*SCSAVS
Trigger: GGACACTGCAGAACAGCTTCATGTTCCCAAAATCAC...CCATGTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
3UTR-3UTR CCA 90 bp ACAAATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACATGGGGAGGATTGCAAGAGTaGTGTTTCCAGGGTTCACAA +
Preference number: 2 (lower is better)
Translates to: TNAAITFIHPCLRVTTTWGGLQE*CFQGSQ
Trigger: TTGTGAACCCTGGAAACACCACTCTTGCAATCCTCC...CCATGTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329066.9
ENST00000422464.5
3UTR-3UTR TCA 90 bp ACAATGTGTGAAGCCTTGAACGTAGGAGATTTTAGATCCAGATGCTGTGAATTCATTGGAGAAAAGCTTTaGCTGGCTTCAGTTTCGCAT +
Preference number: 2 (lower is better)
Translates to: TMCEALNVGDFRSRCCEFIGEKL*LASVSH
Trigger: ATGCGAAACTGAAGCCAGTCAAAGCTTTTCTCCAAT...GAATTCACAGCATCTGGATCTAAAATCTCCTACGTTCAAGGCTTCACACATTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382269.7
ENST00000539820.5
ENST00000617910.3
ENST00000629774.2
3UTR-3UTR CCA 90 bp ATGTGTGAAGCCTTGAACGTAGGAGATTTTAGATCCAGATGCTGTGAATTCTTACAGTTTCGCATTATTTaGTCTGTCCTGCTGGAAGGT +
Preference number: 2 (lower is better)
Translates to: MCEALNVGDFRSRCCEFLQFRII*SVLLEG
Trigger: ACCTTCCAGCAGGACAGACCAAATAATGCGAAACTG...TAAGAATTCACAGCATCTGGATCTAAAATCTCCTACGTTCAAGGCTTCACACAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382269.7
ENST00000539820.5
ENST00000617910.3
ENST00000629774.2
3UTR TCA 72 bp TGCCGTGCAGCAGACCTGAGGCGCCCTCCTCCTGCCTaGGACTTTGTGCCTGTGACCAGCACCTCCCCACTC +
Preference number: 3 (lower is better)
Translates to: CRAADLRRPPPA*DFVPVTSTSPL
Trigger: GAGTGGGGAGGTGCTGGTCACAGGCACAAAGTCTCAGGCAGGAGGAGGGCGCCTCAGGTCTGCTGCACGGCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422464.5
3UTR TCA 72 bp ATGAGGAAGCGTGCGCCCCATGCCGTGCAGCAGACCTaGGGCGCCCTCCTCCTGCCTGAGACTTTGTGCCTG +
Preference number: 3 (lower is better)
Translates to: MRKRAPHAVQQT*GALLLPETLCL
Trigger: CAGGCACAAAGTCTCAGGCAGGAGGAGGGCGCCTCAGGTCTGCTGCACGGCATGGGGCGCACGCTTCCTCAT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422464.5
3UTR TCA 72 bp CTGCCACTTTGCCCTCAGAGGGCTCTCGGCAGCCTGTaGGTATCCCGGCCTTCCATCCCAGCACTCTCCTGC +
Preference number: 3 (lower is better)
Translates to: LPLCPQRALGSL*VSRPSIPALSC
Trigger: GCAGGAGAGTGCTGGGATGGAAGGCCGGGATACTCACAGGCTGCCGAGAGCCCTCTGAGGGCAAAGTGGCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422464.5
3UTR-3UTR CAA 90 bp GTGTGGTCAGCAGAGATTCTCCCAGGAGCGTCAGTGGAGCCCGCCCAGCAGCTGACCCAGGGGCAGGCTTaGCAGGTGGATGTAGACGTC +
Preference number: 3 (lower is better)
Translates to: VWSAEILPGASVEPAQQLTQGQA*QVDVDV
Trigger: GACGTCTACATCCACCTGCAAAGCCTGCCCCTGGGT...CAGCTGCTGGGCGGGCTCCACTGACGCTCCTGGGAGAATCTCTGCTGACCACAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382269.7
ENST00000539820.5
ENST00000617910.3
ENST00000629774.2
3UTR TCA 72 bp AGCCGTGCTGAGCACACAGGTCCCTGCGACCACAGATaGACAGAACGCCTGGCCTTGCCCCTGGTGTCAGTC +
Preference number: 3 (lower is better)
Translates to: SRAEHTGPCDHR*TERLALPLVSV
Trigger: GACTGACACCAGGGGCAAGGCCAGGCGTTCTGTTCATCTGTGGTCGCAGGGACCTGTGTGCTCAGCACGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422464.5
3UTR TCA 72 bp AGAGGGAAGCCAGATGTAGGCCCTGTGGACACCTGGTaGTGGGCAGGGGGTGTGGAAAAACCAGTGCTGGAG +
Preference number: 3 (lower is better)
Translates to: RGKPDVGPVDTW*WAGGVEKPVLE
Trigger: CTCCAGCACTGGTTTTTCCACACCCCCTGCCCATCACCAGGTGTCCACAGGGCCTACATCTGGCTTCCCTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000329066.9
ENST00000422464.5
3UTR GCA 72 bp GGCCAGGTCCTTTTGGTTCCATGCGTGGGAGCCAGGTaGAAAGACGAATGTGCTCTCAGCAGAACGACCCTG +
Preference number: 3 (lower is better)
Translates to: GQVLLVPCVGAR*KDECALSRTTL
Trigger: CAGGGTCGTTCTGCTGAGAGCACATTCGTCTTTGCACCTGGCTCCCACGCATGGAACCAAAAGGACCTGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422464.5
3UTR GCA 72 bp CCACGTGGCAAAGGTTCCTACTCACAGAGTGGGATCTaGAATCCGCAGGCAGGGTCCTTCAGGAAGAAGCCG +
Preference number: 3 (lower is better)
Translates to: PRGKGSYSQSGI*NPQAGSFRKKP
Trigger: CGGCTTCTTCCTGAAGGACCCTGCCTGCGGATTGCAGATCCCACTCTGTGAGTAGGAACCTTTGCCACGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422464.5
3UTR-3UTR CAA 90 bp GTGTGGTCAGCAGAGATTCTCCCAGGAGCGTCAGTGGAGCCCGCCCAGCAGCTGGCTGAGGCCCTGGTCTaGAGGTTGTTAAAATGTAAA +
Preference number: 3 (lower is better)
Translates to: VWSAEILPGASVEPAQQLAEALV*RLLKCK
Trigger: TTTACATTTTAACAACCTCAAGACCAGGGCCTCAGC...CAGCTGCTGGGCGGGCTCCACTGACGCTCCTGGGAGAATCTCTGCTGACCACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382269.7
ENST00000539820.5
ENST00000617910.3
ENST00000629774.2
3UTR-3UTR CAA 90 bp TCCAGGCCAGGTCCTTTTGGTTCCATGCGTGGGAGCCAGGTGCAAAGACGAATGAGGCAAGAGGATTGCTaGAGCAGGAGGGTCGAAGCT +
Preference number: 3 (lower is better)
Translates to: SRPGPFGSMRGSQVQRRMRQEDC*SRRVEA
Trigger: AGCTTCGACCCTCCTGCTCAAGCAATCCTCTTGCCT...CATTCGTCTTTGCACCTGGCTCCCACGCATGGAACCAAAAGGACCTGGCCTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422464.5
3UTR GCA 72 bp GGTTCCATGCGTGGGAGCCAGGTGCAAAGACGAATGTaGTCTCAGCAGAACGACCCTGGGCTCTGCTTATCT +
Preference number: 3 (lower is better)
Translates to: GSMRGSQVQRRM*SQQNDPGLCLS
Trigger: AGATAAGCAGAGCCCAGGGTCGTTCTGCTGAGAGCACATTCGTCTTTGCACCTGGCTCCCACGCATGGAACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422464.5
3UTR GCA 72 bp AGAGCCTCACTTCCAGGCCAGGTCCTTTTGGTTCCATaGGTGGGAGCCAGGTGCAAAGACGAATGTGCTCTC +
Preference number: 3 (lower is better)
Translates to: RASLPGQVLLVP*VGARCKDECAL
Trigger: GAGAGCACATTCGTCTTTGCACCTGGCTCCCACGCATGGAACCAAAAGGACCTGGCCTGGAAGTGAGGCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422464.5
3UTR CCA 72 bp CCTCACTTCCAGGCCAGGTCCTTTTGGTTCCATGCGTaGGAGCCAGGTGCAAAGACGAATGTGCTCTCAGCA +
Preference number: 3 (lower is better)
Translates to: PHFQARSFWFHA*EPGAKTNVLSA
Trigger: TGCTGAGAGCACATTCGTCTTTGCACCTGGCTCCCACGCATGGAACCAAAAGGACCTGGCCTGGAAGTGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422464.5
3UTR CCA 72 bp AGAGGATCCACGTGGCAAAGGTTCCTACTCACAGAGTaGGATCTGCAATCCGCAGGCAGGGTCCTTCAGGAA +
Preference number: 3 (lower is better)
Translates to: RGSTWQRFLLTE*DLQSAGRVLQE
Trigger: TTCCTGAAGGACCCTGCCTGCGGATTGCAGATCCCACTCTGTGAGTAGGAACCTTTGCCACGTGGATCCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422464.5
3UTR-3UTR CAA 90 bp AATCTCTGGAGGATGAGACAAGTCACTTTGCCTTGTTGGTCCTTAAGGCTCCAGGCCCCCGAGACTGCCTaGTTGAGTCAGGGAGGGAGT +
Preference number: 3 (lower is better)
Translates to: NLWRMRQVTLPCWSLRLQAPETA*LSQGGS
Trigger: ACTCCCTCCCTGACTCAACAAGGCAGTCTCGGGGGC...CTGGAGCCTTAAGGACCAACAAGGCAAAGTGACTTGTCTCATCCTCCAGAGATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329066.9
ENST00000422464.5
3UTR TCA 72 bp CCAGCACTCTGGAATTCAGCTGCTTCACATGTGAAATaGGGACGGCAGCTTTACAGGGTCGCGTGGCTAACG +
Preference number: 3 (lower is better)
Translates to: PALWNSAASHVK*GRQLYRVAWLT
Trigger: CGTTAGCCACGCGACCCTGTAAAGCTGCCGTCCTCATTTCACATGTGAAGCAGCTGAATTCCAGAGTGCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329066.9
ENST00000422464.5
3UTR TCA 72 bp GACAGGAGCTCTTTTCACAAAGGACCGCTGGCGAGATaGGCCATCCTTCTTGCTTGTCATGCTGGAGGGAAG +
Preference number: 3 (lower is better)
Translates to: DRSSFHKGPLAR*AILLACHAGGK
Trigger: CTTCCCTCCAGCATGACAAGCAAGAAGGATGGCTCATCTCGCCAGCGGTCCTTTGTGAAAAGAGCTCCTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422464.5
3UTR GCA 72 bp GGAGGGAAGTTTCTGGCTTCCGGACAAATGCTTGTTTaGAGGAGGCCACAGAGGATCCACGTGGCAAAGGTT +
Preference number: 3 (lower is better)
Translates to: GGKFLASGQMLV*RRPQRIHVAKV
Trigger: AACCTTTGCCACGTGGATCCTCTGTGGCCTCCTGCAAACAAGCATTTGTCCGGAAGCCAGAAACTTCCCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422464.5
3UTR GCA 72 bp GAGTCGTACGGTGATTTTGGGAACATGAAGCTGTTCTaGAGTGTCCTGCCACTTTGCCCTCAGAGGGCTCTC +
Preference number: 3 (lower is better)
Translates to: ESYGDFGNMKLF*SVLPLCPQRAL
Trigger: GAGAGCCCTCTGAGGGCAAAGTGGCAGGACACTGCAGAACAGCTTCATGTTCCCAAAATCACCGTACGACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422464.5
3UTR-3UTR CAA 90 bp ACACTTGATACAAGACAGAAGGGCCTGGACAGGAGCTCTTTTCACAAAGGACCGCTCCTAACTATTGCCTaGCGTGAGGCTGAGGGCTGC +
Preference number: 3 (lower is better)
Translates to: TLDTRQKGLDRSSFHKGPLLTIA*REAEGC
Trigger: GCAGCCCTCAGCCTCACGCAAGGCAATAGTTAGGAG...CGGTCCTTTGTGAAAAGAGCTCCTGTCCAGGCCCTTCTGTCTTGTATCAAGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422464.5
3UTR GCA 72 bp AGGAAGCATCAAACCAAAGAAAGGTTCAGGCTCTACTaGAGGACCCAGGGGCAGGCTTTGCAGGTGGATGTA +
Preference number: 3 (lower is better)
Translates to: RKHQTKERFRLY*RTQGQALQVDV
Trigger: TACATCCACCTGCAAAGCCTGCCCCTGGGTCCTGCAGTAGAGCCTGAACCTTTCTTTGGTTTGATGCTTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382269.7
ENST00000539820.5
ENST00000617910.3
ENST00000629774.2
3UTR CCA 72 bp AGCCTGGGGTCTGAGGCTCATGTGTTGGTGAATCTCTaGAGGATGAGACAAGTCACTTTGCCTTGTTGGTCC +
Preference number: 3 (lower is better)
Translates to: SLGSEAHVLVNL*RMRQVTLPCWS
Trigger: GGACCAACAAGGCAAAGTGACTTGTCTCATCCTCCAGAGATTCACCAACACATGAGCCTCAGACCCCAGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329066.9
ENST00000422464.5
3UTR CCA 72 bp CCATCCTTCTTGCTTGTCATGCTGGAGGGAAGTTTCTaGCTTCCGGACAAATGCTTGTTTGCAGGAGGCCAC +
Preference number: 3 (lower is better)
Translates to: PSFLLVMLEGSF*LPDKCLFAGGH
Trigger: GTGGCCTCCTGCAAACAAGCATTTGTCCGGAAGCCAGAAACTTCCCTCCAGCATGACAAGCAAGAAGGATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422464.5
3UTR-3UTR CAA 90 bp TGCAGGACCCAGGGGCAGGCTTTGCAGGTGGATGTAGACGTCATTGGAGAAAAGTCAGTTTCGCATTATTaGGTCTGTCCTGCTGGAAGG +
Preference number: 3 (lower is better)
Translates to: CRTQGQALQVDVDVIGEKSVSHY*VCPAGR
Trigger: CCTTCCAGCAGGACAGACCAAATAATGCGAAACTGA...CTTTTCTCCAATGACGTCTACATCCACCTGCAAAGCCTGCCCCTGGGTCCTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382269.7
ENST00000539820.5
ENST00000617910.3
ENST00000629774.2
3UTR-3UTR CAA 90 bp GCCAGGTCCTTTTGGTTCCATGCGTGGGAGCCAGGTGCAAAGACGAATGTGCTCAGTGAGCCCTTAGTTTaGGAACCGGTTTGTACAAAT +
Preference number: 3 (lower is better)
Translates to: ARSFWFHAWEPGAKTNVLSEPLV*EPVCTN
Trigger: ATTTGTACAAACCGGTTCCAAAACTAAGGGCTCACT...GAGCACATTCGTCTTTGCACCTGGCTCCCACGCATGGAACCAAAAGGACCTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422464.5
3UTR CCA 72 bp ATGTTCATAGCCCTCCTGTGCCACTGTTGTCATTCGTaGGTGAGATCATTCAGTGCTGCCTCGATGGTCTGT +
Preference number: 3 (lower is better)
Translates to: MFIALLCHCCHS*VRSFSAASMVC
Trigger: ACAGACCATCGAGGCAGCACTGAATGATCTCACCCACGAATGACAACAGTGGCACAGGAGGGCTATGAACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329066.9
ENST00000422464.5
3UTR-3UTR CAA 90 bp GAGACAAGTCACTTTGCCTTGTTGGTCCTTAAGGCTCCAGCCTCTCCCTCAGAACAGATGTGTCTGAGTTaGCTTTCAATGCCGAAGGAC +
Preference number: 3 (lower is better)
Translates to: ETSHFALLVLKAPASPSEQMCLS*LSMPKD
Trigger: GTCCTTCGGCATTGAAAGCAAACTCAGACACATCTG...TTCTGAGGGAGAGGCTGGAGCCTTAAGGACCAACAAGGCAAAGTGACTTGTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329066.9
ENST00000422464.5
3UTR-3UTR CAA 90 bp CCAGTGCCAATGTCATTGTGTGGTCAGCAGAGATTCTCCCAGGAGCGTCAGTGGGCCCTGGTCTTGAGGTaGTTAAAATGTAAACTTAGG +
Preference number: 3 (lower is better)
Translates to: PVPMSLCGQQRFSQERQWALVLR*LKCKLR
Trigger: CCTAAGTTTACATTTTAACAACCTCAAGACCAGGGC...CCACTGACGCTCCTGGGAGAATCTCTGCTGACCACACAATGACATTGGCACTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382269.7
ENST00000539820.5
ENST00000617910.3
ENST00000629774.2
3UTR CCA 72 bp AATCTCTGGAGGATGAGACAAGTCACTTTGCCTTGTTaGTCCTTAAGGCTCCAGCCTCTCCCTCAGAATCAC +
Preference number: 3 (lower is better)
Translates to: NLWRMRQVTLPC*SLRLQPLPQNH
Trigger: GTGATTCTGAGGGAGAGGCTGGAGCCTTAAGGACCAACAAGGCAAAGTGACTTGTCTCATCCTCCAGAGATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329066.9
ENST00000422464.5
3UTR CCA 72 bp TCCTCTCCTGTGCTTCCAGCCGATCCTCAGATTAAGTaGAAGCAAACGCCTGAAAGTGAGCCCTTAGTTTTG +
Preference number: 3 (lower is better)
Translates to: SSPVLPADPQIK*KQTPESEPLVL
Trigger: CAAAACTAAGGGCTCACTTTCAGGCGTTTGCTTCCACTTAATCTGAGGATCGGCTGGAAGCACAGGAGAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422464.5
ENST00000625793.2
3UTR-3UTR CAA 90 bp ACACAGAACAGGATGGCCTGGCACCTAGGGAAAACAACAGTCTGGTATTTTTGGCGGATTTGCCTGTGTTaGGAAAAGAGTCGTACGGTG +
Preference number: 3 (lower is better)
Translates to: TQNRMAWHLGKTTVWYFWRICLC*EKSRTV
Trigger: CACCGTACGACTCTTTTCCAAACACAGGCAAATCCG...CCAAAAATACCAGACTGTTGTTTTCCCTAGGTGCCAGGCCATCCTGTTCTGTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000329066.9
ENST00000422464.5
3UTR-3UTR CAA 90 bp GAATCTCTGGAGGATGAGACAAGTCACTTTGCCTTGTTGGTCCTTAAGGCTCCATCTGAGGCTCATGTGTaGGTGAATCTCTGGAGGATG +
Preference number: 3 (lower is better)
Translates to: ESLEDETSHFALLVLKAPSEAHV*VNLWRM
Trigger: CATCCTCCAGAGATTCACCAACACATGAGCCTCAGA...TGGAGCCTTAAGGACCAACAAGGCAAAGTGACTTGTCTCATCCTCCAGAGATTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329066.9
ENST00000422464.5
3UTR-3UTR CAA 90 bp AGTCACTTTGCCTTGTTGGTCCTTAAGGCTCCAGCCTCTCCCTCAGAATCACTTCAGATGTGTCTGAGTTaGCTTTCAATGCCGAAGGAC +
Preference number: 3 (lower is better)
Translates to: SHFALLVLKAPASPSESLQMCLS*LSMPKD
Trigger: GTCCTTCGGCATTGAAAGCAAACTCAGACACATCTG...AAGTGATTCTGAGGGAGAGGCTGGAGCCTTAAGGACCAACAAGGCAAAGTGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329066.9
ENST00000422464.5
3UTR-3UTR CAA 90 bp TCACTGCTGCCGGCTGAGGCCCTGGTCTTGAGGTTGTTAAAATGTAAACTTAGGTCAGTTTCGCATTATTaGGTCTGTCCTGCTGGAAGG +
Preference number: 3 (lower is better)
Translates to: SLLPAEALVLRLLKCKLRSVSHY*VCPAGR
Trigger: CCTTCCAGCAGGACAGACCAAATAATGCGAAACTGA...CCTAAGTTTACATTTTAACAACCTCAAGACCAGGGCCTCAGCCGGCAGCAGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382269.7
ENST00000539820.5
ENST00000617910.3
ENST00000629774.2
3UTR TCA 72 bp TGTTTGGAAAAGAGTCGTACGGTGATTTTGGGAACATaGAGCTGTTCTGCAGTGTCCTGCCACTTTGCCCTC +
Preference number: 3 (lower is better)
Translates to: CLEKSRTVILGT*SCSAVSCHFAL
Trigger: GAGGGCAAAGTGGCAGGACACTGCAGAACAGCTTCATGTTCCCAAAATCACCGTACGACTCTTTTCCAAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422464.5
3UTR-3UTR CAA 90 bp AGTAACTACGACATGGTACTAGATTTACCCGTGTTGGGAAAACAGTCGTCCTGCCGGATTTGCCTGTGTTaGGAAAAGAGTCGTACGGTG +
Preference number: 3 (lower is better)
Translates to: SNYDMVLDLPVLGKQSSCRICLC*EKSRTV
Trigger: CACCGTACGACTCTTTTCCAAACACAGGCAAATCCG...GCAGGACGACTGTTTTCCCAACACGGGTAAATCTAGTACCATGTCGTAGTTACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000469607.3
3UTR-3UTR CAA 90 bp TCATCCATGCCTGAGAGTAACTACGACATGGTACTAGATTTACCCGTGTTGGGACGGATTTGCCTGTGTTaGGAAAAGAGTCGTACGGTG +
Preference number: 3 (lower is better)
Translates to: SSMPESNYDMVLDLPVLGRICLC*EKSRTV
Trigger: CACCGTACGACTCTTTTCCAAACACAGGCAAATCCG...TCCCAACACGGGTAAATCTAGTACCATGTCGTAGTTACTCTCAGGCATGGATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000469607.3
3UTR-3UTR CAA 90 bp TTGGTGAATCTCTGGAGGATGAGACAAGTCACTTTGCCTTGTTGGTCCTTAAGGCTAGATTTACCCGTGTaGGGAAAACAGTCGTCCTGC +
Preference number: 3 (lower is better)
Translates to: LVNLWRMRQVTLPCWSLRLDLPV*GKQSSC
Trigger: GCAGGACGACTGTTTTCCCAACACGGGTAAATCTAG...CCTTAAGGACCAACAAGGCAAAGTGACTTGTCTCATCCTCCAGAGATTCACCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329066.9
ENST00000422464.5
3UTR-3UTR CAA 90 bp GATTTGCCTGTGTTTGGAAAAGAGTCGTACGGTGATTTTGGGAACATGAAGCTGCTAGATTTACCCGTGTaGGGAAAACAGTCGTCCTGC +
Preference number: 3 (lower is better)
Translates to: DLPVFGKESYGDFGNMKLLDLPV*GKQSSC
Trigger: GCAGGACGACTGTTTTCCCAACACGGGTAAATCTAG...CAGCTTCATGTTCCCAAAATCACCGTACGACTCTTTTCCAAACACAGGCAAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000469607.3
3UTR TCA 72 bp TTCGGATTTGCCTGTGTTTGGAAAAGAGTCGTACGGTaGTTTTGGGAACATGAAGCTGTTCTGCAGTGTCCT +
Preference number: 3 (lower is better)
Translates to: FGFACVWKRVVR*FWEHEAVLQCP
Trigger: AGGACACTGCAGAACAGCTTCATGTTCCCAAAATCACCGTACGACTCTTTTCCAAACACAGGCAAATCCGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000469607.3
3UTR TCA 72 bp TCTGCTTATCTCCGAGGACAGGATCTAATCTCACACTaGATTTCAGAAGGGAGACCGATCATGTTGGCAATG +
Preference number: 3 (lower is better)
Translates to: SAYLRGQDLISH*ISEGRPIMLAM
Trigger: CATTGCCAACATGATCGGTCTCCCTTCTGAAATTCAGTGTGAGATTAGATCCTGTCCTCGGAGATAAGCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422464.5
3UTR-3UTR CAA 90 bp TATTCATCCATGCCTGAGAGTAACTACGACATGGTACTAGATTTACCCGTGTTGCTGCTGATTTCGGATTaGCCTGTGTTTGGAAAAGAG +
Preference number: 3 (lower is better)
Translates to: YSSMPESNYDMVLDLPVLLLISD*PVFGKE
Trigger: CTCTTTTCCAAACACAGGCAAATCCGAAATCAGCAG...CAACACGGGTAAATCTAGTACCATGTCGTAGTTACTCTCAGGCATGGATGAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000469607.3
3UTR-3UTR CAA 90 bp ACAATGTGTGAAGCCTTGAACGTAGGAGATTTTAGATCCAGATGCTGTGAATTCTCAGTTTCGCATTATTaGGTCTGTCCTGCTGGAAGG +
Preference number: 3 (lower is better)
Translates to: TMCEALNVGDFRSRCCEFSVSHY*VCPAGR
Trigger: CCTTCCAGCAGGACAGACCAAATAATGCGAAACTGA...GAATTCACAGCATCTGGATCTAAAATCTCCTACGTTCAAGGCTTCACACATTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382269.7
ENST00000539820.5
ENST00000617910.3
ENST00000629774.2
3UTR-3UTR CAA 90 bp ATGTGTGAAGCCTTGAACGTAGGAGATTTTAGATCCAGATGCTGTGAATTCTTATCAGTTTCGCATTATTaGGTCTGTCCTGCTGGAAGG +
Preference number: 3 (lower is better)
Translates to: MCEALNVGDFRSRCCEFLSVSHY*VCPAGR
Trigger: CCTTCCAGCAGGACAGACCAAATAATGCGAAACTGA...TAAGAATTCACAGCATCTGGATCTAAAATCTCCTACGTTCAAGGCTTCACACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382269.7
ENST00000539820.5
ENST00000617910.3
ENST00000629774.2
3UTR-3UTR CAA 90 bp ACAATGTGTGAAGCCTTGAACGTAGGAGATTTTAGATCCAGATGCTGTGAATTCGCTGAGGCCCTGGTCTaGAGGTTGTTAAAATGTAAA +
Preference number: 3 (lower is better)
Translates to: TMCEALNVGDFRSRCCEFAEALV*RLLKCK
Trigger: TTTACATTTTAACAACCTCAAGACCAGGGCCTCAGC...GAATTCACAGCATCTGGATCTAAAATCTCCTACGTTCAAGGCTTCACACATTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382269.7
ENST00000539820.5
ENST00000617910.3
ENST00000629774.2
3UTR-3UTR CAA 90 bp CAGACAAATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACACTGCTGATTTCGGATTaGCCTGTGTTTGGAAAAGAG +
Preference number: 3 (lower is better)
Translates to: QTNAAITFIHPCLRVTTTLLISD*PVFGKE
Trigger: CTCTTTTCCAAACACAGGCAAATCCGAAATCAGCAG...TGTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATTTGTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
3UTR GCA 72 bp AAATCAGGCAATGTTTACAAGAAAAGGCCAGACAAATaGAGCTATAACATTTATTCATCCATGCCTGAGAGT +
Preference number: 3 (lower is better)
Translates to: KSGNVYKKRPDK*SYNIYSSMPES
Trigger: ACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATTTGTCTGGCCTTTTCTTGTAAACATTGCCTGATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR TCA 90 bp AGGACGGCAGCTTTACAGGGTCGCGTGGCTAACGGTGCCCCCGAGACTGCCTTGTCCTGCTCCGAGTCCTaGGCTGCGGCCCGCTGCGGT +
Preference number: 4 (lower is better)
Translates to: RTAALQGRVANGAPETALSCSES*AAARCG
Trigger: ACCGCAGCGGGCCGCAGCTCAGGACTCGGAGCAGGA...CAAGGCAGTCTCGGGGGCACCGTTAGCCACGCGACCCTGTAAAGCTGCCGTCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000329066.9
CDS-3UTR CCA 90 bp GTCAGCAGAGATTCTCCCAGGAGCGTCAGTGGAGCCCGCCCAGCAGCTGGGGCATCCCAGGAGCGTCAGTaGAGCCCGCCCAGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: VSRDSPRSVSGARPAAGASQERQ*SPPSSW
Trigger: CCAGCTGCTGGGCGGGCTCCACTGACGCTCCTGGGA...TGCCCCAGCTGCTGGGCGGGCTCCACTGACGCTCCTGGGAGAATCTCTGCTGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382269.7
ENST00000539820.5
ENST00000617910.3
ENST00000629774.2
CDS-3UTR CCA 90 bp GAAATGAGGACGGCAGCTTTACAGGGTCGCGTGGCTAACGGTGCCCCCGAGACTGGCCGCAGGCGCGCGTaGCGGCACGAAGGGCAGGTA +
Preference number: 4 (lower is better)
Translates to: EMRTAALQGRVANGAPETGRRRA*RHEGQV
Trigger: TACCTGCCCTTCGTGCCGCCACGCGCGCCTGCGGCC...AGTCTCGGGGGCACCGTTAGCCACGCGACCCTGTAAAGCTGCCGTCCTCATTTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329066.9
ENST00000422464.5
CDS-3UTR CCA 90 bp AGGACGGCAGCTTTACAGGGTCGCGTGGCTAACGGTGCCCCCGAGACTGCCTTGACCTTGCGCGCCTCCTaGTACACGGCGTCCGCGCTC +
Preference number: 4 (lower is better)
Translates to: RTAALQGRVANGAPETALTLRAS*YTASAL
Trigger: GAGCGCGGACGCCGTGTACCAGGAGGCGCGCAAGGT...CAAGGCAGTCTCGGGGGCACCGTTAGCCACGCGACCCTGTAAAGCTGCCGTCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329066.9
ENST00000422464.5
CDS-3UTR CCA 90 bp GTGTGGTCAGCAGAGATTCTCCCAGGAGCGTCAGTGGAGCCCGCCCAGCAGCTGTCCCAGGAGCGTCAGTaGAGCCCGCCCAGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: VWSAEILPGASVEPAQQLSQERQ*SPPSSW
Trigger: CCAGCTGCTGGGCGGGCTCCACTGACGCTCCTGGGA...CAGCTGCTGGGCGGGCTCCACTGACGCTCCTGGGAGAATCTCTGCTGACCACAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382269.7
ENST00000539820.5
ENST00000617910.3
ENST00000629774.2
CDS-3UTR GCA 90 bp ATGAGGACGGCAGCTTTACAGGGTCGCGTGGCTAACGGTGCCCCCGAGACTGCCCCACAGCGTGTGCAGTaGCGTCAGGGAGGGGACCTC +
Preference number: 4 (lower is better)
Translates to: MRTAALQGRVANGAPETAPQRVQ*RQGGDL
Trigger: GAGGTCCCCTCCCTGACGGCACTGCACACGCTGTGG...GGCAGTCTCGGGGGCACCGTTAGCCACGCGACCCTGTAAAGCTGCCGTCCTCAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000329066.9
ENST00000422464.5
CDS-3UTR GCA 90 bp CAGGAGAAGAGGGAAGCCAGATGTAGGCCCTGTGGACACCTGGTGATGGGCAGGGCGGCCAGGCGGTTGTaGTCGCGCAGCCACAGCGTG +
Preference number: 4 (lower is better)
Translates to: QEKREARCRPCGHLVMGRAARRL*SRSHSV
Trigger: CACGCTGTGGCTGCGCGAGCACAACCGCCTGGCCGC...CCTGCCCATCACCAGGTGTCCACAGGGCCTACATCTGGCTTCCCTCTTCTCCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329066.9
ENST00000422464.5
CDS-3UTR GCA 90 bp AGGACGGCAGCTTTACAGGGTCGCGTGGCTAACGGTGCCCCCGAGACTGCCTTGGCGTCCGCGCTCCAGTaGGCATTGAGGGCCTTGAGC +
Preference number: 4 (lower is better)
Translates to: RTAALQGRVANGAPETALASALQ*ALRALS
Trigger: GCTCAAGGCCCTCAATGCGCACTGGAGCGCGGACGC...CAAGGCAGTCTCGGGGGCACCGTTAGCCACGCGACCCTGTAAAGCTGCCGTCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329066.9
ENST00000422464.5
CDS-3UTR CCA 90 bp AGGACGGCAGCTTTACAGGGTCGCGTGGCTAACGGTGCCCCCGAGACTGCCTTGAGGTCGGGGTGCTCCTaGAAGCTGGCGTCCAGCCTC +
Preference number: 4 (lower is better)
Translates to: RTAALQGRVANGAPETALRSGCS*KLASSL
Trigger: GAGGCTGGACGCCAGCTTCCAGGAGCACCCCGACCT...CAAGGCAGTCTCGGGGGCACCGTTAGCCACGCGACCCTGTAAAGCTGCCGTCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329066.9
ENST00000422464.5
CDS-3UTR TCA 90 bp GCCAGGTCCTTTTGGTTCCATGCGTGGGAGCCAGGTGCAAAGACGAATGTGCTCTGCGGCCCGCTGCGGTaGGGTCCCTACGGCCTGGTG +
Preference number: 4 (lower is better)
Translates to: ARSFWFHAWEPGAKTNVLCGPLR*GPYGLV
Trigger: CACCAGGCCGTAGGGACCTCACCGCAGCGGGCCGCA...GAGCACATTCGTCTTTGCACCTGGCTCCCACGCATGGAACCAAAAGGACCTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422464.5
CDS-3UTR GCA 90 bp ATGAGGACGGCAGCTTTACAGGGTCGCGTGGCTAACGGTGCCCCCGAGACTGCCGTCAACCCGTTCATCTaGTGCCGCGGGTTGGCCGTG +
Preference number: 4 (lower is better)
Translates to: MRTAALQGRVANGAPETAVNPFI*CRGLAV
Trigger: CACGGCCAACCCGCGGCAGCAGATGAACGGGTTGAC...GGCAGTCTCGGGGGCACCGTTAGCCACGCGACCCTGTAAAGCTGCCGTCCTCAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329066.9
ENST00000422464.5
CDS-3UTR GCA 90 bp AGGACGGCAGCTTTACAGGGTCGCGTGGCTAACGGTGCCCCCGAGACTGCCTTGGTGTGGAAAAACCAGTaGTGGAGGGACCGCCGGGGC +
Preference number: 4 (lower is better)
Translates to: RTAALQGRVANGAPETALVWKNQ*WRDRRG
Trigger: GCCCCGGCGGTCCCTCCAGCACTGGTTTTTCCACAC...CAAGGCAGTCTCGGGGGCACCGTTAGCCACGCGACCCTGTAAAGCTGCCGTCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000329066.9
ENST00000422464.5
CDS-3UTR CCA 90 bp GCCAGGTCCTTTTGGTTCCATGCGTGGGAGCCAGGTGCAAAGACGAATGTGCTCTCCCGGAGGCGCGCGTaGACGCGGAGCAGCCCTTCG +
Preference number: 4 (lower is better)
Translates to: ARSFWFHAWEPGAKTNVLSRRRA*TRSSPS
Trigger: CGAAGGGCTGCTCCGCGTCCACGCGCGCCTCCGGGA...GAGCACATTCGTCTTTGCACCTGGCTCCCACGCATGGAACCAAAAGGACCTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422464.5
CDS-3UTR CCA 90 bp ATGAGGACGGCAGCTTTACAGGGTCGCGTGGCTAACGGTGCCCCCGAGACTGCCCTCCTCACCAGCGGGTaGATCGTGGCATGGCCGAAG +
Preference number: 4 (lower is better)
Translates to: MRTAALQGRVANGAPETALLTSG*IVAWPK
Trigger: CTTCGGCCATGCCACGATCCACCCGCTGGTGAGGAG...GGCAGTCTCGGGGGCACCGTTAGCCACGCGACCCTGTAAAGCTGCCGTCCTCAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329066.9
ENST00000422464.5
3UTR CAA 72 bp CAGGGTCGCGTGGCTAACGGTGCCCCCGAGACTGCCTaGTTGAGTCAGGGAGGGAGTGAGTTTCCTCCGGGA +
Preference number: 4 (lower is better)
Translates to: QGRVANGAPETA*LSQGGSEFPPG
Trigger: TCCCGGAGGAAACTCACTCCCTCCCTGACTCAACAAGGCAGTCTCGGGGGCACCGTTAGCCACGCGACCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329066.9
ENST00000422464.5
CDS-3UTR GCA 90 bp ATGAGGACGGCAGCTTTACAGGGTCGCGTGGCTAACGGTGCCCCCGAGACTGCCGTCCCTACGGCCTGGTaGTTTCCGCATCTCAGCTCG +
Preference number: 4 (lower is better)
Translates to: MRTAALQGRVANGAPETAVPTAW*FPHLSS
Trigger: CGAGCTGAGATGCGGAAAGCACCAGGCCGTAGGGAC...GGCAGTCTCGGGGGCACCGTTAGCCACGCGACCCTGTAAAGCTGCCGTCCTCAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329066.9
ENST00000422464.5
CDS-3UTR GCA 90 bp GAAATGAGGACGGCAGCTTTACAGGGTCGCGTGGCTAACGGTGCCCCCGAGACTACCGCCGGGGCAGAGTaGAGACGAGCACGGCATCAG +
Preference number: 4 (lower is better)
Translates to: EMRTAALQGRVANGAPETTAGAE*RRARHQ
Trigger: CTGATGCCGTGCTCGTCTGCACTCTGCCCCGGCGGT...AGTCTCGGGGGCACCGTTAGCCACGCGACCCTGTAAAGCTGCCGTCCTCATTTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329066.9
ENST00000422464.5
CDS-3UTR GCA 90 bp TTGTGTGGTCAGCAGAGATTCTCCCAGGAGCGTCAGTGGAGCCCGCCCAGCAGCGCAGGAACTCACTGCTaGCGGCTGAGGCCCTGGTCT +
Preference number: 4 (lower is better)
Translates to: LCGQQRFSQERQWSPPSSAGTHC*RLRPWS
Trigger: AGACCAGGGCCTCAGCCGGCAGCAGTGAGTTCCTGC...GCTGCTGGGCGGGCTCCACTGACGCTCCTGGGAGAATCTCTGCTGACCACACAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382269.7
ENST00000539820.5
ENST00000617910.3
ENST00000629774.2
CDS-3UTR CCA 90 bp GCGTGGGAGCCAGGTGCAAAGACGAATGTGCTCTCAGCAGAACGACCCTGGGCTGGACCCACGTACTGCTaGAAGGCCTCGGGTCCCAGG +
Preference number: 4 (lower is better)
Translates to: AWEPGAKTNVLSAERPWAGPTYC*KASGPR
Trigger: CCTGGGACCCGAGGCCTTCCAGCAGTACGTGGGTCC...AGCCCAGGGTCGTTCTGCTGAGAGCACATTCGTCTTTGCACCTGGCTCCCACGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422464.5
CDS-3UTR CCA 90 bp GCGTGGGAGCCAGGTGCAAAGACGAATGTGCTCTCAGCAGAACGACCCTGGGCTAGGTCGGGGTGCTCCTaGAAGCTGGCGTCCAGCCTC +
Preference number: 4 (lower is better)
Translates to: AWEPGAKTNVLSAERPWARSGCS*KLASSL
Trigger: GAGGCTGGACGCCAGCTTCCAGGAGCACCCCGACCT...AGCCCAGGGTCGTTCTGCTGAGAGCACATTCGTCTTTGCACCTGGCTCCCACGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422464.5
CDS-3UTR GCA 90 bp ATGAGGACGGCAGCTTTACAGGGTCGCGTGGCTAACGGTGCCCCCGAGACTGCCTGGAGCTCATACCCGTaGCGGCAGGAATACACCAGC +
Preference number: 4 (lower is better)
Translates to: MRTAALQGRVANGAPETAWSSYP*RQEYTS
Trigger: GCTGGTGTATTCCTGCCGGCACGGGTATGAGCTCCA...GGCAGTCTCGGGGGCACCGTTAGCCACGCGACCCTGTAAAGCTGCCGTCCTCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329066.9
ENST00000422464.5
CDS-3UTR CCA 90 bp AGGACGGCAGCTTTACAGGGTCGCGTGGCTAACGGTGCCCCCGAGACTGCCTTGCTGTGGAGAACACGTTaGACACAGTGGGGTTGGCGG +
Preference number: 4 (lower is better)
Translates to: RTAALQGRVANGAPETALLWRTR*TQWGWR
Trigger: CCGCCAACCCCACTGTGTCCAACGTGTTCTCCACAG...CAAGGCAGTCTCGGGGGCACCGTTAGCCACGCGACCCTGTAAAGCTGCCGTCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329066.9
ENST00000422464.5
3UTR CAA 72 bp GGTCGCGTGGCTAACGGTGCCCCCGAGACTGCCTTGTaGAGTCAGGGAGGGAGTGAGTTTCCTCCGGGATCA +
Preference number: 4 (lower is better)
Translates to: GRVANGAPETAL*SQGGSEFPPGS
Trigger: TGATCCCGGAGGAAACTCACTCCCTCCCTGACTCAACAAGGCAGTCTCGGGGGCACCGTTAGCCACGCGACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329066.9
ENST00000422464.5
CDS-3UTR TCA 90 bp GAAATGAGGACGGCAGCTTTACAGGGTCGCGTGGCTAACGGTGCCCCCGAGACTCCATGGGCACCCTGGTaGGGCCAGTGTTGTCACAGA +
Preference number: 4 (lower is better)
Translates to: EMRTAALQGRVANGAPETPWAPW*GQCCHR
Trigger: TCTGTGACAACACTGGCCTCACCAGGGTGCCCATGG...AGTCTCGGGGGCACCGTTAGCCACGCGACCCTGTAAAGCTGCCGTCCTCATTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329066.9
ENST00000422464.5
CDS-3UTR TCA 90 bp ATGAGGACGGCAGCTTTACAGGGTCGCGTGGCTAACGGTGCCCCCGAGACTGCCCAGAAGCCTGGGGTCTaGGGCTCATGTGTTGGTGAA +
Preference number: 4 (lower is better)
Translates to: MRTAALQGRVANGAPETAQKPGV*GSCVGE
Trigger: TTCACCAACACATGAGCCTCAGACCCCAGGCTTCTG...GGCAGTCTCGGGGGCACCGTTAGCCACGCGACCCTGTAAAGCTGCCGTCCTCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329066.9
ENST00000422464.5
CDS-3UTR GCA 90 bp GAAATGAGGACGGCAGCTTTACAGGGTCGCGTGGCTAACGGTGCCCCCGAGACTGTCCCTACGGCCTGGTaGTTTCCGCATCTCAGCTCG +
Preference number: 4 (lower is better)
Translates to: EMRTAALQGRVANGAPETVPTAW*FPHLSS
Trigger: CGAGCTGAGATGCGGAAAGCACCAGGCCGTAGGGAC...AGTCTCGGGGGCACCGTTAGCCACGCGACCCTGTAAAGCTGCCGTCCTCATTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329066.9
ENST00000422464.5
CDS-3UTR CCA 90 bp GGCAAAGGTTCCTACTCACAGAGTGGGATCTGCAATCCGCAGGCAGGGTCCTTCGCAGCCCTTCGGCACTaGTCCAGTTCCGCAGCTGCC +
Preference number: 4 (lower is better)
Translates to: GKGSYSQSGICNPQAGSFAALRH*SSSAAA
Trigger: GGCAGCTGCGGAACTGGACCAGTGCCGAAGGGCTGC...GAAGGACCCTGCCTGCGGATTGCAGATCCCACTCTGTGAGTAGGAACCTTTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422464.5
CDS-3UTR CCA 90 bp CTGTGCTTCCAGCCGATCCTCAGATTAAGTGGAAGCAAACGCCTGAAAGTGAGCGGCCGCAGGCGCGCGTaGCGGCACGAAGGGCAGGTA +
Preference number: 4 (lower is better)
Translates to: LCFQPILRLSGSKRLKVSGRRRA*RHEGQV
Trigger: TACCTGCCCTTCGTGCCGCCACGCGCGCCTGCGGCC...GCTCACTTTCAGGCGTTTGCTTCCACTTAATCTGAGGATCGGCTGGAAGCACAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422464.5
ENST00000625793.2
CDS-3UTR CCA 90 bp CAGGAGAAGAGGGAAGCCAGATGTAGGCCCTGTGGACACCTGGTGATGGGCAGGCTCAGGGTGATGATCTaGTGCAGAGCGCCCACGACC +
Preference number: 4 (lower is better)
Translates to: QEKREARCRPCGHLVMGRLRVMI*CRAPTT
Trigger: GGTCGTGGGCGCTCTGCACCAGATCATCACCCTGAG...CCTGCCCATCACCAGGTGTCCACAGGGCCTACATCTGGCTTCCCTCTTCTCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329066.9
ENST00000422464.5
CDS-3UTR CCA 90 bp GCGTGGGAGCCAGGTGCAAAGACGAATGTGCTCTCAGCAGAACGACCCTGGGCTGAGGTCCCTACGGCCTaGTGCTTTCCGCATCTCAGC +
Preference number: 4 (lower is better)
Translates to: AWEPGAKTNVLSAERPWAEVPTA*CFPHLS
Trigger: GCTGAGATGCGGAAAGCACCAGGCCGTAGGGACCTC...AGCCCAGGGTCGTTCTGCTGAGAGCACATTCGTCTTTGCACCTGGCTCCCACGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422464.5
CDS-3UTR CCA 90 bp CAAACCAAAGAAAGGTTCAGGCTCTACTGCAGGACCCAGGGGCAGGCTTTGCAGTCCCAGGAGCGTCAGTaGAGCCCGCCCAGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: QTKERFRLYCRTQGQALQSQERQ*SPPSSW
Trigger: CCAGCTGCTGGGCGGGCTCCACTGACGCTCCTGGGA...CTGCAAAGCCTGCCCCTGGGTCCTGCAGTAGAGCCTGAACCTTTCTTTGGTTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382269.7
ENST00000539820.5
ENST00000617910.3
ENST00000629774.2
CDS-3UTR TCA 90 bp CAGCAGCAGGGCCTTTCAGAAGGGCCGAGCAGGAACTCACTGCTGCCGGCTGAGCTTTCCCTCTCGAGATaGAGGGGAAGAAGGCTTCTG +
Preference number: 4 (lower is better)
Translates to: QQQGLSEGPSRNSLLPAELSLSR*RGRRLL
Trigger: CAGAAGCCTTCTTCCCCTTCATCTCGAGAGGGAAAG...CTCAGCCGGCAGCAGTGAGTTCCTGCTCGGCCCTTCTGAAAGGCCCTGCTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382269.7
ENST00000539820.5
ENST00000617910.3
ENST00000629774.2
CDS-3UTR GCA 90 bp CCTGTGCTTCCAGCCGATCCTCAGATTAAGTGGAAGCAAACGCCTGAAAGTGAGGCGGCCAGGCGGTTGTaGTCGCGCAGCCACAGCGTG +
Preference number: 4 (lower is better)
Translates to: PVLPADPQIKWKQTPESEAARRL*SRSHSV
Trigger: CACGCTGTGGCTGCGCGAGCACAACCGCCTGGCCGC...CTCACTTTCAGGCGTTTGCTTCCACTTAATCTGAGGATCGGCTGGAAGCACAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422464.5
ENST00000625793.2
CDS-3UTR GCA 90 bp GCCAGGTCCTTTTGGTTCCATGCGTGGGAGCCAGGTGCAAAGACGAATGTGCTCTGTCGGCCACGCTCCTaGTGGCGATGGCTGTGCTCA +
Preference number: 4 (lower is better)
Translates to: ARSFWFHAWEPGAKTNVLCRPRS*WRWLCS
Trigger: TGAGCACAGCCATCGCCAGCAGGAGCGTGGCCGACA...GAGCACATTCGTCTTTGCACCTGGCTCCCACGCATGGAACCAAAAGGACCTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422464.5
CDS-3UTR GCA 90 bp GAAATGAGGACGGCAGCTTTACAGGGTCGCGTGGCTAACGGTGCCCCCGAGACTCAGCTCACGCCTCTGTaGATCCGTGAAGACGTGGCT +
Preference number: 4 (lower is better)
Translates to: EMRTAALQGRVANGAPETQLTPL*IREDVA
Trigger: AGCCACGTCTTCACGGATGCACAGAGGCGTGAGCTG...AGTCTCGGGGGCACCGTTAGCCACGCGACCCTGTAAAGCTGCCGTCCTCATTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329066.9
ENST00000422464.5
CDS-3UTR GCA 90 bp CAGGAGAAGAGGGAAGCCAGATGTAGGCCCTGTGGACACCTGGTGATGGGCAGGTGGAGCTCATACCCGTaGCGGCAGGAATACACCAGC +
Preference number: 4 (lower is better)
Translates to: QEKREARCRPCGHLVMGRWSSYP*RQEYTS
Trigger: GCTGGTGTATTCCTGCCGGCACGGGTATGAGCTCCA...CCTGCCCATCACCAGGTGTCCACAGGGCCTACATCTGGCTTCCCTCTTCTCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329066.9
ENST00000422464.5
CDS-3UTR CCA 90 bp TTGTGTGGTCAGCAGAGATTCTCCCAGGAGCGTCAGTGGAGCCCGCCCAGCAGCCGCCAGGCAAGTGTTTaGGCATTTTGGGGGCAGCAT +
Preference number: 4 (lower is better)
Translates to: LCGQQRFSQERQWSPPSSRQASV*AFWGQH
Trigger: ATGCTGCCCCCAAAATGCCCAAACACTTGCCTGGCG...GCTGCTGGGCGGGCTCCACTGACGCTCCTGGGAGAATCTCTGCTGACCACACAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000382269.7
ENST00000539820.5
ENST00000617910.3
ENST00000629774.2
CDS-3UTR CCA 90 bp GTGCTTCCAGCCGATCCTCAGATTAAGTGGAAGCAAACGCCTGAAAGTGAGCCCACCTTGCGCGCCTCCTaGTACACGGCGTCCGCGCTC +
Preference number: 4 (lower is better)
Translates to: VLPADPQIKWKQTPESEPTLRAS*YTASAL
Trigger: GAGCGCGGACGCCGTGTACCAGGAGGCGCGCAAGGT...GGGCTCACTTTCAGGCGTTTGCTTCCACTTAATCTGAGGATCGGCTGGAAGCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422464.5
ENST00000625793.2
CDS-3UTR CCA 90 bp TCCAGGCCAGGTCCTTTTGGTTCCATGCGTGGGAGCCAGGTGCAAAGACGAATGCCACTCATTGTAACCTaGCAGCCCGTGGTCCCGGCC +
Preference number: 4 (lower is better)
Translates to: SRPGPFGSMRGSQVQRRMPLIVT*QPVVPA
Trigger: GGCCGGGACCACGGGCTGCCAGGTTACAATGAGTGG...CATTCGTCTTTGCACCTGGCTCCCACGCATGGAACCAAAAGGACCTGGCCTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422464.5
CDS-3UTR CCA 90 bp GCGTGGGAGCCAGGTGCAAAGACGAATGTGCTCTCAGCAGAACGACCCTGGGCTGCCCTGTCCGAGCCCTaGGGAGGAAGTTTTCAGCTA +
Preference number: 4 (lower is better)
Translates to: AWEPGAKTNVLSAERPWAALSEP*GGSFQL
Trigger: TAGCTGAAAACTTCCTCCCCAGGGCTCGGACAGGGC...AGCCCAGGGTCGTTCTGCTGAGAGCACATTCGTCTTTGCACCTGGCTCCCACGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422464.5
CDS-3UTR CCA 90 bp AGGACGGCAGCTTTACAGGGTCGCGTGGCTAACGGTGCCCCCGAGACTGCCTTGAAATCCCATCCTTCCTaGGTGCAAGTGAGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: RTAALQGRVANGAPETALKSHPS*VQVSCS
Trigger: GGAGCAGCTCACTTGCACCCAGGAAGGATGGGATTT...CAAGGCAGTCTCGGGGGCACCGTTAGCCACGCGACCCTGTAAAGCTGCCGTCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329066.9
ENST00000422464.5
CDS-3UTR CCA 90 bp TGGGATCTGCAATCCGCAGGCAGGGTCCTTCAGGAAGAAGCCGTGCTGAGCACACTCCCCACTCCCCTCTaGAGGCCACTGTTCTGCTCT +
Preference number: 4 (lower is better)
Translates to: WDLQSAGRVLQEEAVLSTLPTPL*RPLFCS
Trigger: AGAGCAGAACAGTGGCCTCCAGAGGGGAGTGGGGAG...TGTGCTCAGCACGGCTTCTTCCTGAAGGACCCTGCCTGCGGATTGCAGATCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422464.5
CDS-3UTR TCA 90 bp GACAGCAGCAGGGCCTTTCAGAAGGGCCGAGCAGGAACTCACTGCTGCCGGCTGTGTTGCAAGCTCCTGTaGTGGGCCTGTATTTGTTCG +
Preference number: 4 (lower is better)
Translates to: DSSRAFQKGRAGTHCCRLCCKLL*WACICS
Trigger: CGAACAAATACAGGCCCATCACAGGAGCTTGCAACA...CAGCCGGCAGCAGTGAGTTCCTGCTCGGCCCTTCTGAAAGGCCCTGCTGCTGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382269.7
ENST00000539820.5
ENST00000617910.3
ENST00000629774.2
CDS-3UTR TCA 90 bp GGCAAAGGTTCCTACTCACAGAGTGGGATCTGCAATCCGCAGGCAGGGTCCTTCGCCTCTGTGCATCCGTaGAGACGTGGCTGTTCTCCC +
Preference number: 4 (lower is better)
Translates to: GKGSYSQSGICNPQAGSFASVHP*RRGCSP
Trigger: GGGAGAACAGCCACGTCTTCACGGATGCACAGAGGC...GAAGGACCCTGCCTGCGGATTGCAGATCCCACTCTGTGAGTAGGAACCTTTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422464.5
CDS-3UTR TCA 90 bp AAAGAGTCGTACGGTGATTTTGGGAACATGAAGCTGTTCTGCAGTGTCCTGCCATGCGGCCCGCTGCGGTaGGGTCCCTACGGCCTGGTG +
Preference number: 4 (lower is better)
Translates to: KESYGDFGNMKLFCSVLPCGPLR*GPYGLV
Trigger: CACCAGGCCGTAGGGACCTCACCGCAGCGGGCCGCA...TGGCAGGACACTGCAGAACAGCTTCATGTTCCCAAAATCACCGTACGACTCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000469607.3
CDS-3UTR TCA 90 bp CAGGACCCAGGGGCAGGCTTTGCAGGTGGATGTAGACGTCATTGGAGAAAAGCTCTCACTGCTGCCGGCTaGGGCCCTGGTCTTGAGGTT +
Preference number: 4 (lower is better)
Translates to: QDPGAGFAGGCRRHWRKALTAAG*GPGLEV
Trigger: AACCTCAAGACCAGGGCCTCAGCCGGCAGCAGTGAG...AGCTTTTCTCCAATGACGTCTACATCCACCTGCAAAGCCTGCCCCTGGGTCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382269.7
ENST00000539820.5
ENST00000617910.3
ENST00000629774.2
CDS-3UTR TCA 90 bp GCCAGGTCCTTTTGGTTCCATGCGTGGGAGCCAGGTGCAAAGACGAATGTGCTCGAGACTTTGTGCCTGTaGCCAGCACCTCCCCACTCC +
Preference number: 4 (lower is better)
Translates to: ARSFWFHAWEPGAKTNVLETLCL*PAPPHS
Trigger: GGAGTGGGGAGGTGCTGGTCACAGGCACAAAGTCTC...GAGCACATTCGTCTTTGCACCTGGCTCCCACGCATGGAACCAAAAGGACCTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422464.5
CDS-3UTR GCA 90 bp CAGCAGCAGGGCCTTTCAGAAGGGCCGAGCAGGAACTCACTGCTGCCGGCTGAGTTCCATTATCTCTGCTaGTCGGGCAATCACTCCGCT +
Preference number: 4 (lower is better)
Translates to: QQQGLSEGPSRNSLLPAEFHYLC*SGNHSA
Trigger: AGCGGAGTGATTGCCCGAGCAGCAGAGATAATGGAA...CTCAGCCGGCAGCAGTGAGTTCCTGCTCGGCCCTTCTGAAAGGCCCTGCTGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382269.7
ENST00000539820.5
ENST00000617910.3
ENST00000629774.2
CDS-3UTR GCA 90 bp CCTTCCTCTCCTGTGCTTCCAGCCGATCCTCAGATTAAGTGGAAGCAAACGCCTGTCCAGTTCCGCAGCTaGCTCTCTAGGGCCGGGGAG +
Preference number: 4 (lower is better)
Translates to: PSSPVLPADPQIKWKQTPVQFRS*LSRAGE
Trigger: CTCCCCGGCCCTAGAGAGGCAGCTGCGGAACTGGAC...AGGCGTTTGCTTCCACTTAATCTGAGGATCGGCTGGAAGCACAGGAGAGGAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422464.5
ENST00000625793.2
CDS-3UTR GCA 90 bp CCTGTGCTTCCAGCCGATCCTCAGATTAAGTGGAAGCAAACGCCTGAAAGTGAGCGCAGCCACAGCGTGTaGAGTGCCGTCAGGGAGGGG +
Preference number: 4 (lower is better)
Translates to: PVLPADPQIKWKQTPESERSHSV*SAVREG
Trigger: CCCCTCCCTGACGGCACTGCACACGCTGTGGCTGCG...CTCACTTTCAGGCGTTTGCTTCCACTTAATCTGAGGATCGGCTGGAAGCACAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422464.5
ENST00000625793.2
CDS-3UTR GCA 90 bp TGCTTCCAGCCGATCCTCAGATTAAGTGGAAGCAAACGCCTGAAAGTGAGCCCTGAGCGCCCACGACCTTaGGCGCCTCCTGGTACACGG +
Preference number: 4 (lower is better)
Translates to: CFQPILRLSGSKRLKVSPERPRP*APPGTR
Trigger: CCGTGTACCAGGAGGCGCGCAAGGTCGTGGGCGCTC...AGGGCTCACTTTCAGGCGTTTGCTTCCACTTAATCTGAGGATCGGCTGGAAGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422464.5
ENST00000625793.2
CDS-3UTR GCA 90 bp GCCAGGTCCTTTTGGTTCCATGCGTGGGAGCCAGGTGCAAAGACGAATGTGCTCTGGGTGCAAGTGAGCTaGTCCCGGCCTTGGAGCTCA +
Preference number: 4 (lower is better)
Translates to: ARSFWFHAWEPGAKTNVLWVQVS*SRPWSS
Trigger: TGAGCTCCAAGGCCGGGAGCAGCTCACTTGCACCCA...GAGCACATTCGTCTTTGCACCTGGCTCCCACGCATGGAACCAAAAGGACCTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422464.5
CDS-3UTR GCA 90 bp CAAACCAAAGAAAGGTTCAGGCTCTACTGCAGGACCCAGGGGCAGGCTTTGCAGGCAGGAACTCACTGCTaGCGGCTGAGGCCCTGGTCT +
Preference number: 4 (lower is better)
Translates to: QTKERFRLYCRTQGQALQAGTHC*RLRPWS
Trigger: AGACCAGGGCCTCAGCCGGCAGCAGTGAGTTCCTGC...CTGCAAAGCCTGCCCCTGGGTCCTGCAGTAGAGCCTGAACCTTTCTTTGGTTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382269.7
ENST00000539820.5
ENST00000617910.3
ENST00000629774.2
CDS-3UTR GCA 90 bp TGCAGGACCCAGGGGCAGGCTTTGCAGGTGGATGTAGACGTCATTGGAGAAAAGGCAGGAACTCACTGCTaGCGGCTGAGGCCCTGGTCT +
Preference number: 4 (lower is better)
Translates to: CRTQGQALQVDVDVIGEKAGTHC*RLRPWS
Trigger: AGACCAGGGCCTCAGCCGGCAGCAGTGAGTTCCTGC...CTTTTCTCCAATGACGTCTACATCCACCTGCAAAGCCTGCCCCTGGGTCCTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382269.7
ENST00000539820.5
ENST00000617910.3
ENST00000629774.2
CDS-3UTR GCA 90 bp CAGCAGCAGGGCCTTTCAGAAGGGCCGAGCAGGAACTCACTGCTGCCGGCTGAGGATCACAGCTCCCAGTaGCAATGTCATTGTGTGGTC +
Preference number: 4 (lower is better)
Translates to: QQQGLSEGPSRNSLLPAEDHSSQ*QCHCVV
Trigger: GACCACACAATGACATTGGCACTGGGAGCTGTGATC...CTCAGCCGGCAGCAGTGAGTTCCTGCTCGGCCCTTCTGAAAGGCCCTGCTGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382269.7
ENST00000539820.5
ENST00000617910.3
ENST00000629774.2
CDS-3UTR GCA 90 bp GACAGCAGCAGGGCCTTTCAGAAGGGCCGAGCAGGAACTCACTGCTGCCGGCTGGATCACAGCTCCCAGTaGCAATGTCATTGTGTGGTC +
Preference number: 4 (lower is better)
Translates to: DSSRAFQKGRAGTHCCRLDHSSQ*QCHCVV
Trigger: GACCACACAATGACATTGGCACTGGGAGCTGTGATC...CAGCCGGCAGCAGTGAGTTCCTGCTCGGCCCTTCTGAAAGGCCCTGCTGCTGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382269.7
ENST00000539820.5
ENST00000617910.3
ENST00000629774.2
CDS-3UTR CCA 90 bp CCTGTGCTTCCAGCCGATCCTCAGATTAAGTGGAAGCAAACGCCTGAAAGTGAGGTGCCAGGGCCGTGTTaGAGGCGCCCCATCTGGGGT +
Preference number: 4 (lower is better)
Translates to: PVLPADPQIKWKQTPESEVPGPC*RRPIWG
Trigger: ACCCCAGATGGGGCGCCTCCAACACGGCCCTGGCAC...CTCACTTTCAGGCGTTTGCTTCCACTTAATCTGAGGATCGGCTGGAAGCACAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422464.5
ENST00000625793.2
CDS-3UTR CCA 90 bp TCTTCCCAGGAGAAGAGGGAAGCCAGATGTAGGCCCTGTGGACACCTGGTGATGAGCTGCCATACACGGTaGACGCGTCCAGGAACGAGG +
Preference number: 4 (lower is better)
Translates to: SSQEKREARCRPCGHLVMSCHTR*TRPGTR
Trigger: CCTCGTTCCTGGACGCGTCCACCGTGTATGGCAGCT...CATCACCAGGTGTCCACAGGGCCTACATCTGGCTTCCCTCTTCTCCTGGGAAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329066.9
ENST00000422464.5
CDS-3UTR CCA 90 bp CCTTCCTCTCCTGTGCTTCCAGCCGATCCTCAGATTAAGTGGAAGCAAACGCCTGCAGCCCTTCGGCACTaGTCCAGTTCCGCAGCTGCC +
Preference number: 4 (lower is better)
Translates to: PSSPVLPADPQIKWKQTPAALRH*SSSAAA
Trigger: GGCAGCTGCGGAACTGGACCAGTGCCGAAGGGCTGC...AGGCGTTTGCTTCCACTTAATCTGAGGATCGGCTGGAAGCACAGGAGAGGAAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422464.5
ENST00000625793.2
CDS-3UTR CCA 90 bp AAAGAGTCGTACGGTGATTTTGGGAACATGAAGCTGTTCTGCAGTGTCCTGCCAGGCCGCAGGCGCGCGTaGCGGCACGAAGGGCAGGTA +
Preference number: 4 (lower is better)
Translates to: KESYGDFGNMKLFCSVLPGRRRA*RHEGQV
Trigger: TACCTGCCCTTCGTGCCGCCACGCGCGCCTGCGGCC...TGGCAGGACACTGCAGAACAGCTTCATGTTCCCAAAATCACCGTACGACTCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR CCA 90 bp CGACATGGTACTAGATTTACCCGTGTTGGGAAAACAGTCGTCCTGCTGATTTCGGGCCGCAGGCGCGCGTaGCGGCACGAAGGGCAGGTA +
Preference number: 4 (lower is better)
Translates to: RHGTRFTRVGKTVVLLISGRRRA*RHEGQV
Trigger: TACCTGCCCTTCGTGCCGCCACGCGCGCCTGCGGCC...CGAAATCAGCAGGACGACTGTTTTCCCAACACGGGTAAATCTAGTACCATGTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR CCA 90 bp TCTTCCCAGGAGAAGAGGGAAGCCAGATGTAGGCCCTGTGGACACCTGGTGATGGAGGTCCCTACGGCCTaGTGCTTTCCGCATCTCAGC +
Preference number: 4 (lower is better)
Translates to: SSQEKREARCRPCGHLVMEVPTA*CFPHLS
Trigger: GCTGAGATGCGGAAAGCACCAGGCCGTAGGGACCTC...CATCACCAGGTGTCCACAGGGCCTACATCTGGCTTCCCTCTTCTCCTGGGAAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329066.9
ENST00000422464.5
CDS-3UTR CCA 90 bp TGGGATCTGCAATCCGCAGGCAGGGTCCTTCAGGAAGAAGCCGTGCTGAGCACAGATGGGCAGGGGGTGTaGAAAAACCAGTGCTGGAGG +
Preference number: 4 (lower is better)
Translates to: WDLQSAGRVLQEEAVLSTDGQGV*KNQCWR
Trigger: CCTCCAGCACTGGTTTTTCCACACCCCCTGCCCATC...TGTGCTCAGCACGGCTTCTTCCTGAAGGACCCTGCCTGCGGATTGCAGATCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000422464.5
CDS-3UTR TCA 90 bp CAGGAGAAGAGGGAAGCCAGATGTAGGCCCTGTGGACACCTGGTGATGGGCAGGCTTTCCCTCTCGAGATaGAGGGGAAGAAGGCTTCTG +
Preference number: 4 (lower is better)
Translates to: QEKREARCRPCGHLVMGRLSLSR*RGRRLL
Trigger: CAGAAGCCTTCTTCCCCTTCATCTCGAGAGGGAAAG...CCTGCCCATCACCAGGTGTCCACAGGGCCTACATCTGGCTTCCCTCTTCTCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329066.9
CDS-3UTR TCA 90 bp CAGCAGCAGGGCCTTTCAGAAGGGCCGAGCAGGAACTCACTGCTGCCGGCTGAGGGATTCCTCTTTTCTTaGGGTTTCTCTGCATCGTGG +
Preference number: 4 (lower is better)
Translates to: QQQGLSEGPSRNSLLPAEGFLFS*GFSASW
Trigger: CCACGATGCAGAGAAACCTCAAGAAAAGAGGAATCC...CTCAGCCGGCAGCAGTGAGTTCCTGCTCGGCCCTTCTGAAAGGCCCTGCTGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382269.7
ENST00000539820.5
ENST00000617910.3
ENST00000629774.2
CDS-3UTR TCA 90 bp GTGCTTCCAGCCGATCCTCAGATTAAGTGGAAGCAAACGCCTGAAAGTGAGCCCCTTCCTGGGTGCAAGTaGGCTGCTCCCGGCCTTGGA +
Preference number: 4 (lower is better)
Translates to: VLPADPQIKWKQTPESEPLPGCK*AAPGLG
Trigger: TCCAAGGCCGGGAGCAGCTCACTTGCACCCAGGAAG...GGGCTCACTTTCAGGCGTTTGCTTCCACTTAATCTGAGGATCGGCTGGAAGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422464.5
ENST00000625793.2
CDS-3UTR TCA 90 bp TCTTCCCAGGAGAAGAGGGAAGCCAGATGTAGGCCCTGTGGACACCTGGTGATGAAATCACCGTCGAGGTaGGACCTGCGAAGCCTCCGA +
Preference number: 4 (lower is better)
Translates to: SSQEKREARCRPCGHLVMKSPSR*DLRSLR
Trigger: TCGGAGGCTTCGCAGGTCTCACCTCGACGGTGATTT...CATCACCAGGTGTCCACAGGGCCTACATCTGGCTTCCCTCTTCTCCTGGGAAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329066.9
ENST00000422464.5
CDS-3UTR TCA 90 bp GAGAGTAACTACGACATGGTACTAGATTTACCCGTGTTGGGAAAACAGTCGTCCTGCGGCCCGCTGCGGTaGGGTCCCTACGGCCTGGTG +
Preference number: 4 (lower is better)
Translates to: ESNYDMVLDLPVLGKQSSCGPLR*GPYGLV
Trigger: CACCAGGCCGTAGGGACCTCACCGCAGCGGGCCGCA...GGACGACTGTTTTCCCAACACGGGTAAATCTAGTACCATGTCGTAGTTACTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000469607.3
CDS-3UTR TCA 90 bp GGTACTAGATTTACCCGTGTTGGGAAAACAGTCGTCCTGCTGATTTCGGATTTGTGCGGCCCGCTGCGGTaGGGTCCCTACGGCCTGGTG +
Preference number: 4 (lower is better)
Translates to: GTRFTRVGKTVVLLISDLCGPLR*GPYGLV
Trigger: CACCAGGCCGTAGGGACCTCACCGCAGCGGGCCGCA...CAAATCCGAAATCAGCAGGACGACTGTTTTCCCAACACGGGTAAATCTAGTACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000469607.3
CDS-3UTR TCA 90 bp ACGCCTGAAAGTGAGCCCTTAGTTTTGGAACCGGTTTGTACAAATGGAAGGCATTGCGGCCCGCTGCGGTaGGGTCCCTACGGCCTGGTG +
Preference number: 4 (lower is better)
Translates to: TPESEPLVLEPVCTNGRHCGPLR*GPYGLV
Trigger: CACCAGGCCGTAGGGACCTCACCGCAGCGGGCCGCA...ATGCCTTCCATTTGTACAAACCGGTTCCAAAACTAAGGGCTCACTTTCAGGCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422464.5
ENST00000625793.2
CDS-3UTR TCA 90 bp GTCAGCAGAGATTCTCCCAGGAGCGTCAGTGGAGCCCGCCCAGCAGCTGGGGCAGTGGAATACAATGTGTaGAGCCTTGAACGTAGGAGA +
Preference number: 4 (lower is better)
Translates to: VSRDSPRSVSGARPAAGAVEYNV*SLERRR
Trigger: TCTCCTACGTTCAAGGCTTCACACATTGTATTCCAC...TGCCCCAGCTGCTGGGCGGGCTCCACTGACGCTCCTGGGAGAATCTCTGCTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382269.7
ENST00000539820.5
ENST00000617910.3
ENST00000629774.2
CDS-3UTR GCA 90 bp GACAGCAGCAGGGCCTTTCAGAAGGGCCGAGCAGGAACTCACTGCTGCCGGCTGTGTTTCCATTATCTCTaGTGCTCGGGCAATCACTCC +
Preference number: 4 (lower is better)
Translates to: DSSRAFQKGRAGTHCCRLCFHYL*CSGNHS
Trigger: GGAGTGATTGCCCGAGCAGCAGAGATAATGGAAACA...CAGCCGGCAGCAGTGAGTTCCTGCTCGGCCCTTCTGAAAGGCCCTGCTGCTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382269.7
ENST00000539820.5
ENST00000617910.3
ENST00000629774.2
CDS-3UTR GCA 90 bp CTGTGCTTCCAGCCGATCCTCAGATTAAGTGGAAGCAAACGCCTGAAAGTGAGCTGGAGGGAGCCATCGTaGCAGGGCCGTGTTGGAGGC +
Preference number: 4 (lower is better)
Translates to: LCFQPILRLSGSKRLKVSWREPS*QGRVGG
Trigger: GCCTCCAACACGGCCCTGGCACGATGGCTCCCTCCA...GCTCACTTTCAGGCGTTTGCTTCCACTTAATCTGAGGATCGGCTGGAAGCACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422464.5
ENST00000625793.2
CDS-3UTR GCA 90 bp CCTGAGAGTAACTACGACATGGTACTAGATTTACCCGTGTTGGGAAAACAGTCGCGCCTTGGTCCCCGGTaGCGCAGGCGGCCGAAGAGC +
Preference number: 4 (lower is better)
Translates to: PESNYDMVLDLPVLGKQSRLGPR*RRRPKS
Trigger: GCTCTTCGGCCGCCTGCGGCACCGGGGACCAAGGCG...CGACTGTTTTCCCAACACGGGTAAATCTAGTACCATGTCGTAGTTACTCTCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR GCA 90 bp ACTAGATTTACCCGTGTTGGGAAAACAGTCGTCCTGCTGATTTCGGATTTGCCTCGCCTTGGTCCCCGGTaGCGCAGGCGGCCGAAGAGC +
Preference number: 4 (lower is better)
Translates to: TRFTRVGKTVVLLISDLPRLGPR*RRRPKS
Trigger: GCTCTTCGGCCGCCTGCGGCACCGGGGACCAAGGCG...AGGCAAATCCGAAATCAGCAGGACGACTGTTTTCCCAACACGGGTAAATCTAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR GCA 90 bp AAGTTTCTGGCTTCCGGACAAATGCTTGTTTGCAGGAGGCCACAGAGGATCCACCTAGGGCCGGGGAGCTaGCATACACGGTGGACGCGT +
Preference number: 4 (lower is better)
Translates to: KFLASGQMLVCRRPQRIHLGPGS*HTRWTR
Trigger: ACGCGTCCACCGTGTATGGCAGCTCCCCGGCCCTAG...GTGGATCCTCTGTGGCCTCCTGCAAACAAGCATTTGTCCGGAAGCCAGAAACTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422464.5
CDS-3UTR GCA 90 bp TGCTTCCAGCCGATCCTCAGATTAAGTGGAAGCAAACGCCTGAAAGTGAGCCCTCTAGGGCCGGGGAGCTaGCATACACGGTGGACGCGT +
Preference number: 4 (lower is better)
Translates to: CFQPILRLSGSKRLKVSPLGPGS*HTRWTR
Trigger: ACGCGTCCACCGTGTATGGCAGCTCCCCGGCCCTAG...AGGGCTCACTTTCAGGCGTTTGCTTCCACTTAATCTGAGGATCGGCTGGAAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422464.5
ENST00000625793.2
CDS-3UTR GCA 90 bp CTGTGCTTCCAGCCGATCCTCAGATTAAGTGGAAGCAAACGCCTGAAAGTGAGCCCACAGCGTGTGCAGTaGCGTCAGGGAGGGGACCTC +
Preference number: 4 (lower is better)
Translates to: LCFQPILRLSGSKRLKVSPQRVQ*RQGGDL
Trigger: GAGGTCCCCTCCCTGACGGCACTGCACACGCTGTGG...GCTCACTTTCAGGCGTTTGCTTCCACTTAATCTGAGGATCGGCTGGAAGCACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422464.5
ENST00000625793.2
CDS-3UTR GCA 90 bp CCTGGACAGGAGCTCTTTTCACAAAGGACCGCTGGCGAGATGAGCCATCCTTCTACCCGAGACAGGGAGTaGTTCTCCAGCTCACGCCTC +
Preference number: 4 (lower is better)
Translates to: PGQELFSQRTAGEMSHPSTRDRE*FSSSRL
Trigger: GAGGCGTGAGCTGGAGAAGCACTCCCTGTCTCGGGT...AGAAGGATGGCTCATCTCGCCAGCGGTCCTTTGTGAAAAGAGCTCCTGTCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422464.5
CDS-3UTR GCA 90 bp GCGTGGGAGCCAGGTGCAAAGACGAATGTGCTCTCAGCAGAACGACCCTGGGCTCCTCCCTTGGGGTTCTaGATACAAGGTAAGGGGGTA +
Preference number: 4 (lower is better)
Translates to: AWEPGAKTNVLSAERPWAPPLGF*IQGKGV
Trigger: TACCCCCTTACCTTGTATGCAGAACCCCAAGGGAGG...AGCCCAGGGTCGTTCTGCTGAGAGCACATTCGTCTTTGCACCTGGCTCCCACGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000422464.5
CDS-3UTR CCA 90 bp CAGGAGAAGAGGGAAGCCAGATGTAGGCCCTGTGGACACCTGGTGATGGGCAGGTTTGCTGGTGCTCTGTaGTGTGAACGCGATGTCGTG +
Preference number: 4 (lower is better)
Translates to: QEKREARCRPCGHLVMGRFAGAL*CERDVV
Trigger: CACGACATCGCGTTCACACCACAGAGCACCAGCAAA...CCTGCCCATCACCAGGTGTCCACAGGGCCTACATCTGGCTTCCCTCTTCTCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329066.9
ENST00000422464.5
CDS-3UTR CCA 90 bp CCTGTGCTTCCAGCCGATCCTCAGATTAAGTGGAAGCAAACGCCTGAAAGTGAGGCCGCGGGTTGGCCGTaGACAGGTTCCCAAAGAGCG +
Preference number: 4 (lower is better)
Translates to: PVLPADPQIKWKQTPESEAAGWP*TGSQRA
Trigger: CGCTCTTTGGGAACCTGTCCACGGCCAACCCGCGGC...CTCACTTTCAGGCGTTTGCTTCCACTTAATCTGAGGATCGGCTGGAAGCACAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422464.5
ENST00000625793.2
CDS-3UTR CCA 90 bp CCTGAGAGTAACTACGACATGGTACTAGATTTACCCGTGTTGGGAAAACAGTCGTCCCGGAGGCGCGCGTaGACGCGGAGCAGCCCTTCG +
Preference number: 4 (lower is better)
Translates to: PESNYDMVLDLPVLGKQSSRRRA*TRSSPS
Trigger: CGAAGGGCTGCTCCGCGTCCACGCGCGCCTCCGGGA...CGACTGTTTTCCCAACACGGGTAAATCTAGTACCATGTCGTAGTTACTCTCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR CCA 90 bp ACGCCTGAAAGTGAGCCCTTAGTTTTGGAACCGGTTTGTACAAATGGAAGGCATTCCCGGAGGCGCGCGTaGACGCGGAGCAGCCCTTCG +
Preference number: 4 (lower is better)
Translates to: TPESEPLVLEPVCTNGRHSRRRA*TRSSPS
Trigger: CGAAGGGCTGCTCCGCGTCCACGCGCGCCTCCGGGA...ATGCCTTCCATTTGTACAAACCGGTTCCAAAACTAAGGGCTCACTTTCAGGCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422464.5
ENST00000625793.2
CDS-3UTR CCA 90 bp CTGTGCTTCCAGCCGATCCTCAGATTAAGTGGAAGCAAACGCCTGAAAGTGAGCGGACCCACGTACTGCTaGAAGGCCTCGGGTCCCAGG +
Preference number: 4 (lower is better)
Translates to: LCFQPILRLSGSKRLKVSGPTYC*KASGPR
Trigger: CCTGGGACCCGAGGCCTTCCAGCAGTACGTGGGTCC...GCTCACTTTCAGGCGTTTGCTTCCACTTAATCTGAGGATCGGCTGGAAGCACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422464.5
ENST00000625793.2
CDS-3UTR CCA 90 bp AAGTTTCTGGCTTCCGGACAAATGCTTGTTTGCAGGAGGCCACAGAGGATCCACGGGTGGATCGTGGCATaGCCGAAGCGGAAGGCGGCT +
Preference number: 4 (lower is better)
Translates to: KFLASGQMLVCRRPQRIHGWIVA*PKRKAA
Trigger: AGCCGCCTTCCGCTTCGGCCATGCCACGATCCACCC...GTGGATCCTCTGTGGCCTCCTGCAAACAAGCATTTGTCCGGAAGCCAGAAACTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422464.5
CDS-3UTR CCA 90 bp CCTCTCCTGTGCTTCCAGCCGATCCTCAGATTAAGTGGAAGCAAACGCCTGAAAGGGTGGATCGTGGCATaGCCGAAGCGGAAGGCGGCT +
Preference number: 4 (lower is better)
Translates to: PLLCFQPILRLSGSKRLKGWIVA*PKRKAA
Trigger: AGCCGCCTTCCGCTTCGGCCATGCCACGATCCACCC...TTTCAGGCGTTTGCTTCCACTTAATCTGAGGATCGGCTGGAAGCACAGGAGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422464.5
ENST00000625793.2
CDS-3UTR CCA 90 bp CCTGTGCTTCCAGCCGATCCTCAGATTAAGTGGAAGCAAACGCCTGAAAGTGAGCCAGCGGGTGGATCGTaGCATGGCCGAAGCGGAAGG +
Preference number: 4 (lower is better)
Translates to: PVLPADPQIKWKQTPESEPAGGS*HGRSGR
Trigger: CCTTCCGCTTCGGCCATGCCACGATCCACCCGCTGG...CTCACTTTCAGGCGTTTGCTTCCACTTAATCTGAGGATCGGCTGGAAGCACAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422464.5
ENST00000625793.2
CDS-3UTR CCA 90 bp CTGTGCTTCCAGCCGATCCTCAGATTAAGTGGAAGCAAACGCCTGAAAGTGAGCAGGTCGGGGTGCTCCTaGAAGCTGGCGTCCAGCCTC +
Preference number: 4 (lower is better)
Translates to: LCFQPILRLSGSKRLKVSRSGCS*KLASSL
Trigger: GAGGCTGGACGCCAGCTTCCAGGAGCACCCCGACCT...GCTCACTTTCAGGCGTTTGCTTCCACTTAATCTGAGGATCGGCTGGAAGCACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422464.5
ENST00000625793.2
CDS-3UTR CCA 90 bp CCTGTGCTTCCAGCCGATCCTCAGATTAAGTGGAAGCAAACGCCTGAAAGTGAGGGGCTGAAGAAAGCCTaGTGCAGCCACAGCCCGGGC +
Preference number: 4 (lower is better)
Translates to: PVLPADPQIKWKQTPESEGLKKA*CSHSPG
Trigger: GCCCGGGCTGTGGCTGCACCAGGCTTTCTTCAGCCC...CTCACTTTCAGGCGTTTGCTTCCACTTAATCTGAGGATCGGCTGGAAGCACAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422464.5
ENST00000625793.2
CDS-3UTR CCA 90 bp CTCCTTCCTCTCCTGTGCTTCCAGCCGATCCTCAGATTAAGTGGAAGCAAACGCCCACTCATTGTAACCTaGCAGCCCGTGGTCCCGGCC +
Preference number: 4 (lower is better)
Translates to: LLPLLCFQPILRLSGSKRPLIVT*QPVVPA
Trigger: GGCCGGGACCACGGGCTGCCAGGTTACAATGAGTGG...GCGTTTGCTTCCACTTAATCTGAGGATCGGCTGGAAGCACAGGAGAGGAAGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422464.5
ENST00000625793.2
CDS-3UTR CCA 90 bp CCTCTCCTGTGCTTCCAGCCGATCCTCAGATTAAGTGGAAGCAAACGCCTGAAACGCTCCTGCTGGCGATaGCTGTGCTCAGGTCAGCGG +
Preference number: 4 (lower is better)
Translates to: PLLCFQPILRLSGSKRLKRSCWR*LCSGQR
Trigger: CCGCTGACCTGAGCACAGCCATCGCCAGCAGGAGCG...TTTCAGGCGTTTGCTTCCACTTAATCTGAGGATCGGCTGGAAGCACAGGAGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422464.5
ENST00000625793.2
CDS-3UTR CCA 90 bp CTGTGCTTCCAGCCGATCCTCAGATTAAGTGGAAGCAAACGCCTGAAAGTGAGCCGGCCACGCTCCTGCTaGCGATGGCTGTGCTCAGGT +
Preference number: 4 (lower is better)
Translates to: LCFQPILRLSGSKRLKVSRPRSC*RWLCSG
Trigger: ACCTGAGCACAGCCATCGCCAGCAGGAGCGTGGCCG...GCTCACTTTCAGGCGTTTGCTTCCACTTAATCTGAGGATCGGCTGGAAGCACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422464.5
ENST00000625793.2
CDS-3UTR CCA 90 bp CTGTGCTTCCAGCCGATCCTCAGATTAAGTGGAAGCAAACGCCTGAAAGTGAGCAGCTGCTCCCGGCCTTaGAGCTCATACCCGTGCCGG +
Preference number: 4 (lower is better)
Translates to: LCFQPILRLSGSKRLKVSSCSRP*SSYPCR
Trigger: CCGGCACGGGTATGAGCTCCAAGGCCGGGAGCAGCT...GCTCACTTTCAGGCGTTTGCTTCCACTTAATCTGAGGATCGGCTGGAAGCACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422464.5
ENST00000625793.2
CDS-3UTR CCA 90 bp CCTGGACAGGAGCTCTTTTCACAAAGGACCGCTGGCGAGATGAGCCATCCTTCTTGGAAAAACCAGTGCTaGAGGGACCGCCGGGGCAGA +
Preference number: 4 (lower is better)
Translates to: PGQELFSQRTAGEMSHPSWKNQC*RDRRGR
Trigger: TCTGCCCCGGCGGTCCCTCCAGCACTGGTTTTTCCA...AGAAGGATGGCTCATCTCGCCAGCGGTCCTTTGTGAAAAGAGCTCCTGTCCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000422464.5
CDS-3UTR CCA 90 bp CCTTCCTCTCCTGTGCTTCCAGCCGATCCTCAGATTAAGTGGAAGCAAACGCCTACATGCGGCATGGTGTaGCCCACCTGCTCCGAGTCC +
Preference number: 4 (lower is better)
Translates to: PSSPVLPADPQIKWKQTPTCGMV*PTCSES
Trigger: GGACTCGGAGCAGGTGGGCCACACCATGCCGCATGT...AGGCGTTTGCTTCCACTTAATCTGAGGATCGGCTGGAAGCACAGGAGAGGAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422464.5
ENST00000625793.2
CDS-3UTR CCA 90 bp GAAATGAGGACGGCAGCTTTACAGGGTCGCGTGGCTAACGGTGCCCCCGAGACTTTCCTACTCACAGAGTaGGATCTGCAATCCGCAGGC +
Preference number: 4 (lower is better)
Translates to: EMRTAALQGRVANGAPETFLLTE*DLQSAG
Trigger: GCCTGCGGATTGCAGATCCCACTCTGTGAGTAGGAA...AGTCTCGGGGGCACCGTTAGCCACGCGACCCTGTAAAGCTGCCGTCCTCATTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000422464.5
CDS-3UTR TCA 90 bp TTGTGTGGTCAGCAGAGATTCTCCCAGGAGCGTCAGTGGAGCCCGCCCAGCAGCAGCCAACTGCACTGCTaGGTAATTTTCACGGCTGTA +
Preference number: 4 (lower is better)
Translates to: LCGQQRFSQERQWSPPSSSQLHC*VIFTAV
Trigger: TACAGCCGTGAAAATTACTCAGCAGTGCAGTTGGCT...GCTGCTGGGCGGGCTCCACTGACGCTCCTGGGAGAATCTCTGCTGACCACACAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382269.7
ENST00000539820.5
ENST00000617910.3
ENST00000629774.2
CDS-3UTR TCA 90 bp CAGCAGCAGGGCCTTTCAGAAGGGCCGAGCAGGAACTCACTGCTGCCGGCTGAGCAGACATGTTTGCAATaGTGCTCAGCAGATCTTCTG +
Preference number: 4 (lower is better)
Translates to: QQQGLSEGPSRNSLLPAEQTCLQ*CSADLL
Trigger: CAGAAGATCTGCTGAGCATCATTGCAAACATGTCTG...CTCAGCCGGCAGCAGTGAGTTCCTGCTCGGCCCTTCTGAAAGGCCCTGCTGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382269.7
ENST00000539820.5
ENST00000617910.3
ENST00000629774.2
CDS-3UTR TCA 90 bp CCTTCCTCTCCTGTGCTTCCAGCCGATCCTCAGATTAAGTGGAAGCAAACGCCTAGCCTCGGGGCTGACTaGAGCCGTCCTCATAGACTG +
Preference number: 4 (lower is better)
Translates to: PSSPVLPADPQIKWKQTPSLGAD*SRPHRL
Trigger: CAGTCTATGAGGACGGCTTCAGTCAGCCCCGAGGCT...AGGCGTTTGCTTCCACTTAATCTGAGGATCGGCTGGAAGCACAGGAGAGGAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422464.5
ENST00000625793.2
CDS-3UTR TCA 90 bp GTGCTTCCAGCCGATCCTCAGATTAAGTGGAAGCAAACGCCTGAAAGTGAGCCCGCCTCTGTGCATCCGTaGAGACGTGGCTGTTCTCCC +
Preference number: 4 (lower is better)
Translates to: VLPADPQIKWKQTPESEPASVHP*RRGCSP
Trigger: GGGAGAACAGCCACGTCTTCACGGATGCACAGAGGC...GGGCTCACTTTCAGGCGTTTGCTTCCACTTAATCTGAGGATCGGCTGGAAGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422464.5
ENST00000625793.2
CDS-3UTR TCA 90 bp TCATCCATGCCTGAGAGTAACTACGACATGGTACTAGATTTACCCGTGTTGGGATCCTGCTCCGAGTCCTaGGCTGCGGCCCGCTGCGGT +
Preference number: 4 (lower is better)
Translates to: SSMPESNYDMVLDLPVLGSCSES*AAARCG
Trigger: ACCGCAGCGGGCCGCAGCTCAGGACTCGGAGCAGGA...TCCCAACACGGGTAAATCTAGTACCATGTCGTAGTTACTCTCAGGCATGGATGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000469607.3
CDS-3UTR TCA 90 bp GTCAGCAGAGATTCTCCCAGGAGCGTCAGTGGAGCCCGCCCAGCAGCTGGGGCAATTGGAGAAAAGCTTTaGCTGGCTTCAGTTTCGCAT +
Preference number: 4 (lower is better)
Translates to: VSRDSPRSVSGARPAAGAIGEKL*LASVSH
Trigger: ATGCGAAACTGAAGCCAGTCAAAGCTTTTCTCCAAT...TGCCCCAGCTGCTGGGCGGGCTCCACTGACGCTCCTGGGAGAATCTCTGCTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382269.7
ENST00000539820.5
ENST00000617910.3
ENST00000629774.2
CDS-3UTR TCA 90 bp ACGCCTGAAAGTGAGCCCTTAGTTTTGGAACCGGTTTGTACAAATGGAAGGCATACCTGCTCCGAGTCCTaGGCTGCGGCCCGCTGCGGT +
Preference number: 4 (lower is better)
Translates to: TPESEPLVLEPVCTNGRHTCSES*AAARCG
Trigger: ACCGCAGCGGGCCGCAGCTCAGGACTCGGAGCAGGT...ATGCCTTCCATTTGTACAAACCGGTTCCAAAACTAAGGGCTCACTTTCAGGCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422464.5
ENST00000625793.2
CDS-3UTR GCA 90 bp GTGTTTGGAAAAGAGTCGTACGGTGATTTTGGGAACATGAAGCTGTTCTGCAGTCGCCTTGGTCCCCGGTaGCGCAGGCGGCCGAAGAGC +
Preference number: 4 (lower is better)
Translates to: VFGKESYGDFGNMKLFCSRLGPR*RRRPKS
Trigger: GCTCTTCGGCCGCCTGCGGCACCGGGGACCAAGGCG...ACTGCAGAACAGCTTCATGTTCCCAAAATCACCGTACGACTCTTTTCCAAACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR GCA 90 bp AAGCAAACGCCTGAAAGTGAGCCCTTAGTTTTGGAACCGGTTTGTACAAATGGACGCCTTGGTCCCCGGTaGCGCAGGCGGCCGAAGAGC +
Preference number: 4 (lower is better)
Translates to: KQTPESEPLVLEPVCTNGRLGPR*RRRPKS
Trigger: GCTCTTCGGCCGCCTGCGGCACCGGGGACCAAGGCG...TCCATTTGTACAAACCGGTTCCAAAACTAAGGGCTCACTTTCAGGCGTTTGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422464.5
ENST00000625793.2
CDS-3UTR GCA 90 bp CTGTGCTTCCAGCCGATCCTCAGATTAAGTGGAAGCAAACGCCTGAAAGTGAGCAACCCGTTCATCTGCTaGCGCGGGTTGGCCGTGGAC +
Preference number: 4 (lower is better)
Translates to: LCFQPILRLSGSKRLKVSNPFIC*RGLAVD
Trigger: GTCCACGGCCAACCCGCGGCAGCAGATGAACGGGTT...GCTCACTTTCAGGCGTTTGCTTCCACTTAATCTGAGGATCGGCTGGAAGCACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422464.5
ENST00000625793.2
CDS-3UTR GCA 90 bp CCTGAGAGTAACTACGACATGGTACTAGATTTACCCGTGTTGGGAAAACAGTCGGCGGCCAGGCGGTTGTaGTCGCGCAGCCACAGCGTG +
Preference number: 4 (lower is better)
Translates to: PESNYDMVLDLPVLGKQSAARRL*SRSHSV
Trigger: CACGCTGTGGCTGCGCGAGCACAACCGCCTGGCCGC...CGACTGTTTTCCCAACACGGGTAAATCTAGTACCATGTCGTAGTTACTCTCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR GCA 90 bp TCATCCATGCCTGAGAGTAACTACGACATGGTACTAGATTTACCCGTGTTGGGAGCGGCCAGGCGGTTGTaGTCGCGCAGCCACAGCGTG +
Preference number: 4 (lower is better)
Translates to: SSMPESNYDMVLDLPVLGAARRL*SRSHSV
Trigger: CACGCTGTGGCTGCGCGAGCACAACCGCCTGGCCGC...TCCCAACACGGGTAAATCTAGTACCATGTCGTAGTTACTCTCAGGCATGGATGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR GCA 90 bp GTGTCTGAGTTTGCTTTCAATGCCGAAGGACTCCTAACTATTGCCTTGCGTGAGGAGCGCCCACGACCTTaGGCGCCTCCTGGTACACGG +
Preference number: 4 (lower is better)
Translates to: VSEFAFNAEGLLTIALREERPRP*APPGTR
Trigger: CCGTGTACCAGGAGGCGCGCAAGGTCGTGGGCGCTC...CTCACGCAAGGCAATAGTTAGGAGTCCTTCGGCATTGAAAGCAAACTCAGACAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329066.9
ENST00000422464.5
CDS-3UTR GCA 90 bp ACTAGATTTACCCGTGTTGGGAAAACAGTCGTCCTGCTGATTTCGGATTTGCCTCCGGGCAGGTCGGGGTaGTCCTGGAAGCTGGCGTCC +
Preference number: 4 (lower is better)
Translates to: TRFTRVGKTVVLLISDLPPGRSG*SWKLAS
Trigger: GGACGCCAGCTTCCAGGAGCACCCCGACCTGCCCGG...AGGCAAATCCGAAATCAGCAGGACGACTGTTTTCCCAACACGGGTAAATCTAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000469607.3
CDS-3UTR GCA 90 bp CCTGAGAGTAACTACGACATGGTACTAGATTTACCCGTGTTGGGAAAACAGTCGCCGGGCAGGTCGGGGTaGTCCTGGAAGCTGGCGTCC +
Preference number: 4 (lower is better)
Translates to: PESNYDMVLDLPVLGKQSPGRSG*SWKLAS
Trigger: GGACGCCAGCTTCCAGGAGCACCCCGACCTGCCCGG...CGACTGTTTTCCCAACACGGGTAAATCTAGTACCATGTCGTAGTTACTCTCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000469607.3
CDS-3UTR GCA 90 bp CCTGTGTTTGGAAAAGAGTCGTACGGTGATTTTGGGAACATGAAGCTGTTCTGCCCGGGCAGGTCGGGGTaGTCCTGGAAGCTGGCGTCC +
Preference number: 4 (lower is better)
Translates to: PVFGKESYGDFGNMKLFCPGRSG*SWKLAS
Trigger: GGACGCCAGCTTCCAGGAGCACCCCGACCTGCCCGG...GCAGAACAGCTTCATGTTCCCAAAATCACCGTACGACTCTTTTCCAAACACAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000469607.3
CDS-3UTR GCA 90 bp CCTCTCCTGTGCTTCCAGCCGATCCTCAGATTAAGTGGAAGCAAACGCCTGAAATGTCGGCCACGCTCCTaGTGGCGATGGCTGTGCTCA +
Preference number: 4 (lower is better)
Translates to: PLLCFQPILRLSGSKRLKCRPRS*WRWLCS
Trigger: TGAGCACAGCCATCGCCAGCAGGAGCGTGGCCGACA...TTTCAGGCGTTTGCTTCCACTTAATCTGAGGATCGGCTGGAAGCACAGGAGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422464.5
ENST00000625793.2
CDS-3UTR GCA 90 bp ATGAGGACGGCAGCTTTACAGGGTCGCGTGGCTAACGGTGCCCCCGAGACTGCCTCGATGTTGTCAGGATaGTTGTACAAGTCCAGGATC +
Preference number: 4 (lower is better)
Translates to: MRTAALQGRVANGAPETASMLSG*LYKSRI
Trigger: GATCCTGGACTTGTACAAGCATCCTGACAACATCGA...GGCAGTCTCGGGGGCACCGTTAGCCACGCGACCCTGTAAAGCTGCCGTCCTCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329066.9
ENST00000422464.5
CDS-3UTR GCA 90 bp CCTTCCTCTCCTGTGCTTCCAGCCGATCCTCAGATTAAGTGGAAGCAAACGCCTCGTCGAGGTGAGACCTaGGAAGCCTCCGATCAGCAG +
Preference number: 4 (lower is better)
Translates to: PSSPVLPADPQIKWKQTPRRGET*EASDQQ
Trigger: CTGCTGATCGGAGGCTTCGCAGGTCTCACCTCGACG...AGGCGTTTGCTTCCACTTAATCTGAGGATCGGCTGGAAGCACAGGAGAGGAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422464.5
ENST00000625793.2
CDS-3UTR GCA 90 bp CCTGAGAGTAACTACGACATGGTACTAGATTTACCCGTGTTGGGAAAACAGTCGGTGCGGCAGGGCGGCTaGTGGAGGCAGAAGCCTGGG +
Preference number: 4 (lower is better)
Translates to: PESNYDMVLDLPVLGKQSVRQGG*WRQKPG
Trigger: CCCAGGCTTCTGCCTCCAGCAGCCGCCCTGCCGCAC...CGACTGTTTTCCCAACACGGGTAAATCTAGTACCATGTCGTAGTTACTCTCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329066.9
ENST00000422464.5
CDS-3UTR GCA 90 bp GTGCTTCCAGCCGATCCTCAGATTAAGTGGAAGCAAACGCCTGAAAGTGAGCCCCAGAACGCCTGGCCTTaGCCCTGGTGTCAGTCAGAC +
Preference number: 4 (lower is better)
Translates to: VLPADPQIKWKQTPESEPQNAWP*PWCQSD
Trigger: GTCTGACTGACACCAGGGGCAAGGCCAGGCGTTCTG...GGGCTCACTTTCAGGCGTTTGCTTCCACTTAATCTGAGGATCGGCTGGAAGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422464.5
CDS-3UTR CCA 90 bp CCTTCCTCTCCTGTGCTTCCAGCCGATCCTCAGATTAAGTGGAAGCAAACGCCTCCGGACCGGGGGCAGTaGGAACCCGTTGTACAAGAA +
Preference number: 4 (lower is better)
Translates to: PSSPVLPADPQIKWKQTPPDRGQ*EPVVQE
Trigger: TTCTTGTACAACGGGTTCCCACTGCCCCCGGTCCGG...AGGCGTTTGCTTCCACTTAATCTGAGGATCGGCTGGAAGCACAGGAGAGGAAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422464.5
ENST00000625793.2
CDS-3UTR CCA 90 bp GGTACTAGATTTACCCGTGTTGGGAAAACAGTCGTCCTGCTGATTTCGGATTTGCCAAAGAGCGCGCCTTaGTCCCCGGTGCCGCAGGCG +
Preference number: 4 (lower is better)
Translates to: GTRFTRVGKTVVLLISDLPKSAP*SPVPQA
Trigger: CGCCTGCGGCACCGGGGACCAAGGCGCGCTCTTTGG...CAAATCCGAAATCAGCAGGACGACTGTTTTCCCAACACGGGTAAATCTAGTACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR CCA 90 bp CTCCTTCCTCTCCTGTGCTTCCAGCCGATCCTCAGATTAAGTGGAAGCAAACGCAGCTGCCATACACGGTaGACGCGTCCAGGAACGAGG +
Preference number: 4 (lower is better)
Translates to: LLPLLCFQPILRLSGSKRSCHTR*TRPGTR
Trigger: CCTCGTTCCTGGACGCGTCCACCGTGTATGGCAGCT...GCGTTTGCTTCCACTTAATCTGAGGATCGGCTGGAAGCACAGGAGAGGAAGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422464.5
ENST00000625793.2
CDS-3UTR CCA 90 bp GATTTGCCTGTGTTTGGAAAAGAGTCGTACGGTGATTTTGGGAACATGAAGCTGTCCCGGAGGCGCGCGTaGACGCGGAGCAGCCCTTCG +
Preference number: 4 (lower is better)
Translates to: DLPVFGKESYGDFGNMKLSRRRA*TRSSPS
Trigger: CGAAGGGCTGCTCCGCGTCCACGCGCGCCTCCGGGA...CAGCTTCATGTTCCCAAAATCACCGTACGACTCTTTTCCAAACACAGGCAAATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR CCA 90 bp TTTGGAAAAGAGTCGTACGGTGATTTTGGGAACATGAAGCTGTTCTGCAGTGTCTCCCGGAGGCGCGCGTaGACGCGGAGCAGCCCTTCG +
Preference number: 4 (lower is better)
Translates to: FGKESYGDFGNMKLFCSVSRRRA*TRSSPS
Trigger: CGAAGGGCTGCTCCGCGTCCACGCGCGCCTCCGGGA...GACACTGCAGAACAGCTTCATGTTCCCAAAATCACCGTACGACTCTTTTCCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR CCA 90 bp TTTGGAAAAGAGTCGTACGGTGATTTTGGGAACATGAAGCTGTTCTGCAGTGTCGGCCGCAGGCGCGCGTaGCGGCACGAAGGGCAGGTA +
Preference number: 4 (lower is better)
Translates to: FGKESYGDFGNMKLFCSVGRRRA*RHEGQV
Trigger: TACCTGCCCTTCGTGCCGCCACGCGCGCCTGCGGCC...GACACTGCAGAACAGCTTCATGTTCCCAAAATCACCGTACGACTCTTTTCCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR CCA 90 bp ACACAGAACAGGATGGCCTGGCACCTAGGGAAAACAACAGTCTGGTATTTTTGGACCTTGCGCGCCTCCTaGTACACGGCGTCCGCGCTC +
Preference number: 4 (lower is better)
Translates to: TQNRMAWHLGKTTVWYFWTLRAS*YTASAL
Trigger: GAGCGCGGACGCCGTGTACCAGGAGGCGCGCAAGGT...CCAAAAATACCAGACTGTTGTTTTCCCTAGGTGCCAGGCCATCCTGTTCTGTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329066.9
ENST00000422464.5
CDS-3UTR CCA 90 bp GTGCTTCCAGCCGATCCTCAGATTAAGTGGAAGCAAACGCCTGAAAGTGAGCCCCTCAGGGTGATGATCTaGTGCAGAGCGCCCACGACC +
Preference number: 4 (lower is better)
Translates to: VLPADPQIKWKQTPESEPLRVMI*CRAPTT
Trigger: GGTCGTGGGCGCTCTGCACCAGATCATCACCCTGAG...GGGCTCACTTTCAGGCGTTTGCTTCCACTTAATCTGAGGATCGGCTGGAAGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422464.5
ENST00000625793.2
CDS-3UTR CCA 90 bp AATTTTGAAACATGCGATCATTATGAGGAAGCGTGCGCCCCATGCCGTGCAGCACCAGCGGGTGGATCGTaGCATGGCCGAAGCGGAAGG +
Preference number: 4 (lower is better)
Translates to: NFETCDHYEEACAPCRAAPAGGS*HGRSGR
Trigger: CCTTCCGCTTCGGCCATGCCACGATCCACCCGCTGG...TGCTGCACGGCATGGGGCGCACGCTTCCTCATAATGATCGCATGTTTCAAAATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422464.5
CDS-3UTR CCA 90 bp CTGTGCTTCCAGCCGATCCTCAGATTAAGTGGAAGCAAACGCCTGAAAGTGAGCGGTGCTCCTGGAAGCTaGCGTCCAGCCTCCTCACCA +
Preference number: 4 (lower is better)
Translates to: LCFQPILRLSGSKRLKVSGAPGS*RPASSP
Trigger: TGGTGAGGAGGCTGGACGCCAGCTTCCAGGAGCACC...GCTCACTTTCAGGCGTTTGCTTCCACTTAATCTGAGGATCGGCTGGAAGCACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422464.5
ENST00000625793.2
CDS-3UTR CCA 90 bp TCCAGGCCAGGTCCTTTTGGTTCCATGCGTGGGAGCCAGGTGCAAAGACGAATGGGGAATTTGCCGACTTaGAAGGCATCCATGGGCACC +
Preference number: 4 (lower is better)
Translates to: SRPGPFGSMRGSQVQRRMGNLPT*KASMGT
Trigger: GGTGCCCATGGATGCCTTCCAAGTCGGCAAATTCCC...CATTCGTCTTTGCACCTGGCTCCCACGCATGGAACCAAAAGGACCTGGCCTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422464.5
CDS-3UTR CCA 90 bp CTGAAGCAAAATGTTCATAGCCCTCCTGTGCCACTGTTGTCATTCGTGGGTGAGAGCTGCTCCCGGCCTTaGAGCTCATACCCGTGCCGG +
Preference number: 4 (lower is better)
Translates to: LKQNVHSPPVPLLSFVGESCSRP*SSYPCR
Trigger: CCGGCACGGGTATGAGCTCCAAGGCCGGGAGCAGCT...CTCACCCACGAATGACAACAGTGGCACAGGAGGGCTATGAACATTTTGCTTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329066.9
ENST00000422464.5
CDS-3UTR CCA 90 bp CCTTCCTCTCCTGTGCTTCCAGCCGATCCTCAGATTAAGTGGAAGCAAACGCCTTGGAAACATGCGGCATaGTGTGGCCCACCTGCTCCG +
Preference number: 4 (lower is better)
Translates to: PSSPVLPADPQIKWKQTPWKHAA*CGPPAP
Trigger: CGGAGCAGGTGGGCCACACCATGCCGCATGTTTCCA...AGGCGTTTGCTTCCACTTAATCTGAGGATCGGCTGGAAGCACAGGAGAGGAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422464.5
ENST00000625793.2
CDS-3UTR CCA 90 bp CTCCTTCCTCTCCTGTGCTTCCAGCCGATCCTCAGATTAAGTGGAAGCAAACGCGTCCAACCACTGCGGTaGCAGCTGGAAACATGCGGC +
Preference number: 4 (lower is better)
Translates to: LLPLLCFQPILRLSGSKRVQPLR*QLETCG
Trigger: GCCGCATGTTTCCAGCTGCCACCGCAGTGGTTGGAC...GCGTTTGCTTCCACTTAATCTGAGGATCGGCTGGAAGCACAGGAGAGGAAGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422464.5
ENST00000625793.2
3UTR CAA 72 bp ACCCAGCCACGCAAGAGGCTGAGGCAAGAGGATTGCTaGAGCAGGAGGGTCGAAGCTGCAGTGAGCTATGTT +
Preference number: 4 (lower is better)
Translates to: TQPRKRLRQEDC*SRRVEAAVSYV
Trigger: AACATAGCTCACTGCAGCTTCGACCCTCCTGCTCAAGCAATCCTCTTGCCTCAGCCTCTTGCGTGGCTGGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422464.5
3UTR CAA 72 bp TCCCAGCACTTTGGGAGTTTCAGACTGGAGGATCTCTaGGGCCTAAGGGCTCAACACCAGCCTGGGCAGCAT +
Preference number: 4 (lower is better)
Translates to: SQHFGSFRLEDL*GLRAQHQPGQH
Trigger: ATGCTGCCCAGGCTGGTGTTGAGCCCTTAGGCCCAAGAGATCCTCCAGTCTGAAACTCCCAAAGTGCTGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422464.5
3UTR CAA 72 bp TGGGAACATGAAGCTGTTCTGCAGTGTCCTGCCACTTaGCCCTCAGAGGGCTCTCGGCAGCCTGTGAGTATC +
Preference number: 4 (lower is better)
Translates to: WEHEAVLQCPAT*PSEGSRQPVSI
Trigger: GATACTCACAGGCTGCCGAGAGCCCTCTGAGGGCAAAGTGGCAGGACACTGCAGAACAGCTTCATGTTCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422464.5
CDS-3UTR TCA 90 bp TTGTGTGGTCAGCAGAGATTCTCCCAGGAGCGTCAGTGGAGCCCGCCCAGCAGCCAGACATGTTTGCAATaGTGCTCAGCAGATCTTCTG +
Preference number: 4 (lower is better)
Translates to: LCGQQRFSQERQWSPPSSQTCLQ*CSADLL
Trigger: CAGAAGATCTGCTGAGCATCATTGCAAACATGTCTG...GCTGCTGGGCGGGCTCCACTGACGCTCCTGGGAGAATCTCTGCTGACCACACAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382269.7
ENST00000539820.5
ENST00000617910.3
ENST00000629774.2
CDS-3UTR TCA 90 bp CTCCTTCCTCTCCTGTGCTTCCAGCCGATCCTCAGATTAAGTGGAAGCAAACGCTGGTGCTCTGTGGTGTaGACGCGATGTCGTGGTCGA +
Preference number: 4 (lower is better)
Translates to: LLPLLCFQPILRLSGSKRWCSVV*TRCRGR
Trigger: TCGACCACGACATCGCGTTCACACCACAGAGCACCA...GCGTTTGCTTCCACTTAATCTGAGGATCGGCTGGAAGCACAGGAGAGGAAGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422464.5
ENST00000625793.2
CDS-3UTR TCA 90 bp AATTTTGAAACATGCGATCATTATGAGGAAGCGTGCGCCCCATGCCGTGCAGCAGGCCCCTCTGCAGGTTaGTGGACGCCAGATCCAAGG +
Preference number: 4 (lower is better)
Translates to: NFETCDHYEEACAPCRAAGPSAG*WTPDPR
Trigger: CCTTGGATCTGGCGTCCATCAACCTGCAGAGGGGCC...TGCTGCACGGCATGGGGCGCACGCTTCCTCATAATGATCGCATGTTTCAAAATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000422464.5
CDS-3UTR TCA 90 bp GGCCAGACAAATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGTGCGGCCCGCTGCGGTaGGGTCCCTACGGCCTGGTG +
Preference number: 4 (lower is better)
Translates to: GQTNAAITFIHPCLRVTTCGPLR*GPYGLV
Trigger: CACCAGGCCGTAGGGACCTCACCGCAGCGGGCCGCA...CGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATTTGTCTGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR TCA 90 bp TTGCCTGTGTTTGGAAAAGAGTCGTACGGTGATTTTGGGAACATGAAGCTGTTCTCCTGCTCCGAGTCCTaGGCTGCGGCCCGCTGCGGT +
Preference number: 4 (lower is better)
Translates to: LPVFGKESYGDFGNMKLFSCSES*AAARCG
Trigger: ACCGCAGCGGGCCGCAGCTCAGGACTCGGAGCAGGA...GAACAGCTTCATGTTCCCAAAATCACCGTACGACTCTTTTCCAAACACAGGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000469607.3
CDS-3UTR TCA 90 bp ACACTTGATACAAGACAGAAGGGCCTGGACAGGAGCTCTTTTCACAAAGGACCGGCTCTCGGCAGCCTGTaGGTATCCCGGCCTTCCATC +
Preference number: 4 (lower is better)
Translates to: TLDTRQKGLDRSSFHKGPALGSL*VSRPSI
Trigger: GATGGAAGGCCGGGATACTCACAGGCTGCCGAGAGC...CGGTCCTTTGTGAAAAGAGCTCCTGTCCAGGCCCTTCTGTCTTGTATCAAGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422464.5
CDS-3UTR TCA 90 bp GAAATGAGGACGGCAGCTTTACAGGGTCGCGTGGCTAACGGTGCCCCCGAGACTAAACAGTCGTCCTGCTaGTTTCGGATTTGCCTGTGT +
Preference number: 4 (lower is better)
Translates to: EMRTAALQGRVANGAPETKQSSC*FRICLC
Trigger: ACACAGGCAAATCCGAAATCAGCAGGACGACTGTTT...AGTCTCGGGGGCACCGTTAGCCACGCGACCCTGTAAAGCTGCCGTCCTCATTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329066.9
ENST00000422464.5
CDS-3UTR TCA 90 bp GAATCAGGAAGCATCAAACCAAAGAAAGGTTCAGGCTCTACTGCAGGACCCAGGCTCACTGCTGCCGGCTaGGGCCCTGGTCTTGAGGTT +
Preference number: 4 (lower is better)
Translates to: ESGSIKPKKGSGSTAGPRLTAAG*GPGLEV
Trigger: AACCTCAAGACCAGGGCCTCAGCCGGCAGCAGTGAG...CCTGGGTCCTGCAGTAGAGCCTGAACCTTTCTTTGGTTTGATGCTTCCTGATTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382269.7
ENST00000539820.5
ENST00000617910.3
ENST00000629774.2
CDS-3UTR TCA 90 bp CCTTCCTCTCCTGTGCTTCCAGCCGATCCTCAGATTAAGTGGAAGCAAACGCCTGGACCGCTGGCGAGATaGGCCATCCTTCTTGCTTGT +
Preference number: 4 (lower is better)
Translates to: PSSPVLPADPQIKWKQTPGPLAR*AILLAC
Trigger: ACAAGCAAGAAGGATGGCTCATCTCGCCAGCGGTCC...AGGCGTTTGCTTCCACTTAATCTGAGGATCGGCTGGAAGCACAGGAGAGGAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422464.5
CDS-3UTR GCA 90 bp CAGCAGCAGGGCCTTTCAGAAGGGCCGAGCAGGAACTCACTGCTGCCGGCTGAGACATCCAGACATGTTTaGAATGATGCTCAGCAGATC +
Preference number: 4 (lower is better)
Translates to: QQQGLSEGPSRNSLLPAETSRHV*NDAQQI
Trigger: GATCTGCTGAGCATCATTGCAAACATGTCTGGATGT...CTCAGCCGGCAGCAGTGAGTTCCTGCTCGGCCCTTCTGAAAGGCCCTGCTGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382269.7
ENST00000539820.5
ENST00000617910.3
ENST00000629774.2
CDS-3UTR GCA 90 bp AATCTCTGGAGGATGAGACAAGTCACTTTGCCTTGTTGGTCCTTAAGGCTCCAGTGGAGGGAGCCATCGTaGCAGGGCCGTGTTGGAGGC +
Preference number: 4 (lower is better)
Translates to: NLWRMRQVTLPCWSLRLQWREPS*QGRVGG
Trigger: GCCTCCAACACGGCCCTGGCACGATGGCTCCCTCCA...CTGGAGCCTTAAGGACCAACAAGGCAAAGTGACTTGTCTCATCCTCCAGAGATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329066.9
ENST00000422464.5
CDS-3UTR GCA 90 bp AAAGAGTCGTACGGTGATTTTGGGAACATGAAGCTGTTCTGCAGTGTCCTGCCATGGAGGGAGCCATCGTaGCAGGGCCGTGTTGGAGGC +
Preference number: 4 (lower is better)
Translates to: KESYGDFGNMKLFCSVLPWREPS*QGRVGG
Trigger: GCCTCCAACACGGCCCTGGCACGATGGCTCCCTCCA...TGGCAGGACACTGCAGAACAGCTTCATGTTCCCAAAATCACCGTACGACTCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR GCA 90 bp CGACATGGTACTAGATTTACCCGTGTTGGGAAAACAGTCGTCCTGCTGATTTCGCTAGGGCCGGGGAGCTaGCATACACGGTGGACGCGT +
Preference number: 4 (lower is better)
Translates to: RHGTRFTRVGKTVVLLISLGPGS*HTRWTR
Trigger: ACGCGTCCACCGTGTATGGCAGCTCCCCGGCCCTAG...CGAAATCAGCAGGACGACTGTTTTCCCAACACGGGTAAATCTAGTACCATGTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR GCA 90 bp GAATCTCTGGAGGATGAGACAAGTCACTTTGCCTTGTTGGTCCTTAAGGCTCCACCACAGCGTGTGCAGTaGCGTCAGGGAGGGGACCTC +
Preference number: 4 (lower is better)
Translates to: ESLEDETSHFALLVLKAPPQRVQ*RQGGDL
Trigger: GAGGTCCCCTCCCTGACGGCACTGCACACGCTGTGG...TGGAGCCTTAAGGACCAACAAGGCAAAGTGACTTGTCTCATCCTCCAGAGATTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329066.9
ENST00000422464.5
CDS-3UTR GCA 90 bp TTGGTGAATCTCTGGAGGATGAGACAAGTCACTTTGCCTTGTTGGTCCTTAAGGCGCAGCCACAGCGTGTaGAGTGCCGTCAGGGAGGGG +
Preference number: 4 (lower is better)
Translates to: LVNLWRMRQVTLPCWSLRRSHSV*SAVREG
Trigger: CCCCTCCCTGACGGCACTGCACACGCTGTGGCTGCG...CCTTAAGGACCAACAAGGCAAAGTGACTTGTCTCATCCTCCAGAGATTCACCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329066.9
ENST00000422464.5
CDS-3UTR GCA 90 bp GAGAGTAACTACGACATGGTACTAGATTTACCCGTGTTGGGAAAACAGTCGTCCCGCAGCCACAGCGTGTaGAGTGCCGTCAGGGAGGGG +
Preference number: 4 (lower is better)
Translates to: ESNYDMVLDLPVLGKQSSRSHSV*SAVREG
Trigger: CCCCTCCCTGACGGCACTGCACACGCTGTGGCTGCG...GGACGACTGTTTTCCCAACACGGGTAAATCTAGTACCATGTCGTAGTTACTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR GCA 90 bp CGACATGGTACTAGATTTACCCGTGTTGGGAAAACAGTCGTCCTGCTGATTTCGGCGTCCGCGCTCCAGTaGGCATTGAGGGCCTTGAGC +
Preference number: 4 (lower is better)
Translates to: RHGTRFTRVGKTVVLLISASALQ*ALRALS
Trigger: GCTCAAGGCCCTCAATGCGCACTGGAGCGCGGACGC...CGAAATCAGCAGGACGACTGTTTTCCCAACACGGGTAAATCTAGTACCATGTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR GCA 90 bp GGTACTAGATTTACCCGTGTTGGGAAAACAGTCGTCCTGCTGATTTCGGATTTGGAGCGCCCACGACCTTaGGCGCCTCCTGGTACACGG +
Preference number: 4 (lower is better)
Translates to: GTRFTRVGKTVVLLISDLERPRP*APPGTR
Trigger: CCGTGTACCAGGAGGCGCGCAAGGTCGTGGGCGCTC...CAAATCCGAAATCAGCAGGACGACTGTTTTCCCAACACGGGTAAATCTAGTACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR GCA 90 bp CCTGTGTTTGGAAAAGAGTCGTACGGTGATTTTGGGAACATGAAGCTGTTCTGCGAGCGCCCACGACCTTaGGCGCCTCCTGGTACACGG +
Preference number: 4 (lower is better)
Translates to: PVFGKESYGDFGNMKLFCERPRP*APPGTR
Trigger: CCGTGTACCAGGAGGCGCGCAAGGTCGTGGGCGCTC...GCAGAACAGCTTCATGTTCCCAAAATCACCGTACGACTCTTTTCCAAACACAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR GCA 90 bp CCTCTCCTGTGCTTCCAGCCGATCCTCAGATTAAGTGGAAGCAAACGCCTGAAAACCCGAGACAGGGAGTaGTTCTCCAGCTCACGCCTC +
Preference number: 4 (lower is better)
Translates to: PLLCFQPILRLSGSKRLKTRDRE*FSSSRL
Trigger: GAGGCGTGAGCTGGAGAAGCACTCCCTGTCTCGGGT...TTTCAGGCGTTTGCTTCCACTTAATCTGAGGATCGGCTGGAAGCACAGGAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422464.5
ENST00000625793.2
CDS-3UTR GCA 90 bp CTGTGCTTCCAGCCGATCCTCAGATTAAGTGGAAGCAAACGCCTGAAAGTGAGCGTCCCTACGGCCTGGTaGTTTCCGCATCTCAGCTCG +
Preference number: 4 (lower is better)
Translates to: LCFQPILRLSGSKRLKVSVPTAW*FPHLSS
Trigger: CGAGCTGAGATGCGGAAAGCACCAGGCCGTAGGGAC...GCTCACTTTCAGGCGTTTGCTTCCACTTAATCTGAGGATCGGCTGGAAGCACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422464.5
ENST00000625793.2
CDS-3UTR GCA 90 bp CCTTCCTCTCCTGTGCTTCCAGCCGATCCTCAGATTAAGTGGAAGCAAACGCCTGCCTCCCGGAGTCTTTaGAGAGGGGAGGCTGGAAAT +
Preference number: 4 (lower is better)
Translates to: PSSPVLPADPQIKWKQTPASRSL*RGEAGN
Trigger: ATTTCCAGCCTCCCCTCTGCAAAGACTCCGGGAGGC...AGGCGTTTGCTTCCACTTAATCTGAGGATCGGCTGGAAGCACAGGAGAGGAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422464.5
ENST00000625793.2
CDS-3UTR CCA 90 bp GACAGCAGCAGGGCCTTTCAGAAGGGCCGAGCAGGAACTCACTGCTGCCGGCTGAGACAGAAGCTGAGCTaGAGAAAGGATTCCTCTTTT +
Preference number: 4 (lower is better)
Translates to: DSSRAFQKGRAGTHCCRLRQKLS*RKDSSF
Trigger: AAAAGAGGAATCCTTTCTCCAGCTCAGCTTCTGTCT...CAGCCGGCAGCAGTGAGTTCCTGCTCGGCCCTTCTGAAAGGCCCTGCTGCTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382269.7
ENST00000539820.5
ENST00000617910.3
ENST00000629774.2
CDS-3UTR CCA 90 bp GTGTGGTCAGCAGAGATTCTCCCAGGAGCGTCAGTGGAGCCCGCCCAGCAGCTGAATCACTCCGCTTGTTaGCTCAGGAAGTTTGGAAAA +
Preference number: 4 (lower is better)
Translates to: VWSAEILPGASVEPAQQLNHSAC*LRKFGK
Trigger: TTTTCCAAACTTCCTGAGCCAACAAGCGGAGTGATT...CAGCTGCTGGGCGGGCTCCACTGACGCTCCTGGGAGAATCTCTGCTGACCACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382269.7
ENST00000539820.5
ENST00000617910.3
ENST00000629774.2
CDS-3UTR CCA 90 bp CAGGACCCAGGGGCAGGCTTTGCAGGTGGATGTAGACGTCATTGGAGAAAAGCTCGCCAGGCAAGTGTTTaGGCATTTTGGGGGCAGCAT +
Preference number: 4 (lower is better)
Translates to: QDPGAGFAGGCRRHWRKARQASV*AFWGQH
Trigger: ATGCTGCCCCCAAAATGCCCAAACACTTGCCTGGCG...AGCTTTTCTCCAATGACGTCTACATCCACCTGCAAAGCCTGCCCCTGGGTCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000382269.7
ENST00000539820.5
ENST00000617910.3
ENST00000629774.2
CDS-3UTR CCA 90 bp CCAGTGCCAATGTCATTGTGTGGTCAGCAGAGATTCTCCCAGGAGCGTCAGTGGCGCCAGGCAAGTGTTTaGGCATTTTGGGGGCAGCAT +
Preference number: 4 (lower is better)
Translates to: PVPMSLCGQQRFSQERQWRQASV*AFWGQH
Trigger: ATGCTGCCCCCAAAATGCCCAAACACTTGCCTGGCG...CCACTGACGCTCCTGGGAGAATCTCTGCTGACCACACAATGACATTGGCACTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000382269.7
ENST00000539820.5
ENST00000617910.3
ENST00000629774.2
CDS-3UTR CCA 90 bp CCTGTGTTTGGAAAAGAGTCGTACGGTGATTTTGGGAACATGAAGCTGTTCTGCGTGCCAGGGCCGTGTTaGAGGCGCCCCATCTGGGGT +
Preference number: 4 (lower is better)
Translates to: PVFGKESYGDFGNMKLFCVPGPC*RRPIWG
Trigger: ACCCCAGATGGGGCGCCTCCAACACGGCCCTGGCAC...GCAGAACAGCTTCATGTTCCCAAAATCACCGTACGACTCTTTTCCAAACACAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR CCA 90 bp CCTGAGAGTAACTACGACATGGTACTAGATTTACCCGTGTTGGGAAAACAGTCGGTGCCAGGGCCGTGTTaGAGGCGCCCCATCTGGGGT +
Preference number: 4 (lower is better)
Translates to: PESNYDMVLDLPVLGKQSVPGPC*RRPIWG
Trigger: ACCCCAGATGGGGCGCCTCCAACACGGCCCTGGCAC...CGACTGTTTTCCCAACACGGGTAAATCTAGTACCATGTCGTAGTTACTCTCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR CCA 90 bp TGCTTCCAGCCGATCCTCAGATTAAGTGGAAGCAAACGCCTGAAAGTGAGCCCTGCCGTCCTCATAGACTaGAGGGAGCCATCGTGCCAG +
Preference number: 4 (lower is better)
Translates to: CFQPILRLSGSKRLKVSPAVLID*REPSCQ
Trigger: CTGGCACGATGGCTCCCTCCAGTCTATGAGGACGGC...AGGGCTCACTTTCAGGCGTTTGCTTCCACTTAATCTGAGGATCGGCTGGAAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422464.5
ENST00000625793.2
CDS-3UTR CCA 90 bp GGCCAGACAAATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGTCCCGGAGGCGCGCGTaGACGCGGAGCAGCCCTTCG +
Preference number: 4 (lower is better)
Translates to: GQTNAAITFIHPCLRVTTSRRRA*TRSSPS
Trigger: CGAAGGGCTGCTCCGCGTCCACGCGCGCCTCCGGGA...CGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATTTGTCTGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR CCA 90 bp CCTCTCCTGTGCTTCCAGCCGATCCTCAGATTAAGTGGAAGCAAACGCCTGAAACGGGTCCCAGGATCCTaGGGATGTAATCCCTCAGGG +
Preference number: 4 (lower is better)
Translates to: PLLCFQPILRLSGSKRLKRVPGS*GCNPSG
Trigger: CCCTGAGGGATTACATCCCCAGGATCCTGGGACCCG...TTTCAGGCGTTTGCTTCCACTTAATCTGAGGATCGGCTGGAAGCACAGGAGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422464.5
ENST00000625793.2
CDS-3UTR CCA 90 bp ACACTTGATACAAGACAGAAGGGCCTGGACAGGAGCTCTTTTCACAAAGGACCGGGTGCTCCTGGAAGCTaGCGTCCAGCCTCCTCACCA +
Preference number: 4 (lower is better)
Translates to: TLDTRQKGLDRSSFHKGPGAPGS*RPASSP
Trigger: TGGTGAGGAGGCTGGACGCCAGCTTCCAGGAGCACC...CGGTCCTTTGTGAAAAGAGCTCCTGTCCAGGCCCTTCTGTCTTGTATCAAGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422464.5
CDS-3UTR CCA 90 bp GAAATGAGGACGGCAGCTTTACAGGGTCGCGTGGCTAACGGTGCCCCCGAGACTCCAGATCCAAGGTGCTaGAATTGGACAGCACAAAGA +
Preference number: 4 (lower is better)
Translates to: EMRTAALQGRVANGAPETPDPRC*NWTAQR
Trigger: TCTTTGTGCTGTCCAATTCCAGCACCTTGGATCTGG...AGTCTCGGGGGCACCGTTAGCCACGCGACCCTGTAAAGCTGCCGTCCTCATTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329066.9
ENST00000422464.5
CDS-3UTR CCA 90 bp AAAGAGTCGTACGGTGATTTTGGGAACATGAAGCTGTTCTGCAGTGTCCTGCCACGCTCCTGCTGGCGATaGCTGTGCTCAGGTCAGCGG +
Preference number: 4 (lower is better)
Translates to: KESYGDFGNMKLFCSVLPRSCWR*LCSGQR
Trigger: CCGCTGACCTGAGCACAGCCATCGCCAGCAGGAGCG...TGGCAGGACACTGCAGAACAGCTTCATGTTCCCAAAATCACCGTACGACTCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000469607.3
CDS-3UTR CCA 90 bp GAGGCTCATGTGTTGGTGAATCTCTGGAGGATGAGACAAGTCACTTTGCCTTGTCGCTCCTGCTGGCGATaGCTGTGCTCAGGTCAGCGG +
Preference number: 4 (lower is better)
Translates to: EAHVLVNLWRMRQVTLPCRSCWR*LCSGQR
Trigger: CCGCTGACCTGAGCACAGCCATCGCCAGCAGGAGCG...ACAAGGCAAAGTGACTTGTCTCATCCTCCAGAGATTCACCAACACATGAGCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329066.9
ENST00000422464.5
CDS-3UTR CCA 90 bp CGACATGGTACTAGATTTACCCGTGTTGGGAAAACAGTCGTCCTGCTGATTTCGAGCTGCTCCCGGCCTTaGAGCTCATACCCGTGCCGG +
Preference number: 4 (lower is better)
Translates to: RHGTRFTRVGKTVVLLISSCSRP*SSYPCR
Trigger: CCGGCACGGGTATGAGCTCCAAGGCCGGGAGCAGCT...CGAAATCAGCAGGACGACTGTTTTCCCAACACGGGTAAATCTAGTACCATGTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000469607.3
CDS-3UTR CCA 90 bp CCTGTGCTTCCAGCCGATCCTCAGATTAAGTGGAAGCAAACGCCTGAAAGTGAGGAGGTCCCTACGGCCTaGTGCTTTCCGCATCTCAGC +
Preference number: 4 (lower is better)
Translates to: PVLPADPQIKWKQTPESEEVPTA*CFPHLS
Trigger: GCTGAGATGCGGAAAGCACCAGGCCGTAGGGACCTC...CTCACTTTCAGGCGTTTGCTTCCACTTAATCTGAGGATCGGCTGGAAGCACAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422464.5
ENST00000625793.2
CDS-3UTR CCA 90 bp GAGACAAGTCACTTTGCCTTGTTGGTCCTTAAGGCTCCAGCCTCTCCCTCAGAACTTTACAGGGTCGCGTaGCTAACGGTGCCCCCGAGA +
Preference number: 4 (lower is better)
Translates to: ETSHFALLVLKAPASPSELYRVA*LTVPPR
Trigger: TCTCGGGGGCACCGTTAGCCACGCGACCCTGTAAAG...TTCTGAGGGAGAGGCTGGAGCCTTAAGGACCAACAAGGCAAAGTGACTTGTCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329066.9
ENST00000422464.5
CDS-3UTR CCA 90 bp CTGTGCTTCCAGCCGATCCTCAGATTAAGTGGAAGCAAACGCCTGAAAGTGAGCCTTTACAGGGTCGCGTaGCTAACGGTGCCCCCGAGA +
Preference number: 4 (lower is better)
Translates to: LCFQPILRLSGSKRLKVSLYRVA*LTVPPR
Trigger: TCTCGGGGGCACCGTTAGCCACGCGACCCTGTAAAG...GCTCACTTTCAGGCGTTTGCTTCCACTTAATCTGAGGATCGGCTGGAAGCACAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000422464.5
3UTR CAA 72 bp CAAAGGACCGCTGGCGAGATGAGCCATCCTTCTTGCTaGTCATGCTGGAGGGAAGTTTCTGGCTTCCGGACA +
Preference number: 4 (lower is better)
Translates to: QRTAGEMSHPSC*SCWREVSGFRT
Trigger: TGTCCGGAAGCCAGAAACTTCCCTCCAGCATGACAAGCAAGAAGGATGGCTCATCTCGCCAGCGGTCCTTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422464.5
CDS-3UTR TCA 90 bp TGCAGGACCCAGGGGCAGGCTTTGCAGGTGGATGTAGACGTCATTGGAGAAAAGCTTTCCCTCTCGAGATaGAGGGGAAGAAGGCTTCTG +
Preference number: 4 (lower is better)
Translates to: CRTQGQALQVDVDVIGEKLSLSR*RGRRLL
Trigger: CAGAAGCCTTCTTCCCCTTCATCTCGAGAGGGAAAG...CTTTTCTCCAATGACGTCTACATCCACCTGCAAAGCCTGCCCCTGGGTCCTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000382269.7
ENST00000539820.5
ENST00000617910.3
ENST00000629774.2
CDS-3UTR TCA 90 bp GTGTGGTCAGCAGAGATTCTCCCAGGAGCGTCAGTGGAGCCCGCCCAGCAGCTGGGATGCTGTGATTGTTaGGTTTTCAGGTTGACTTTT +
Preference number: 4 (lower is better)
Translates to: VWSAEILPGASVEPAQQLGCCDC*VFRLTF
Trigger: AAAAGTCAACCTGAAAACTCAACAATCACAGCATCC...CAGCTGCTGGGCGGGCTCCACTGACGCTCCTGGGAGAATCTCTGCTGACCACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382269.7
ENST00000539820.5
ENST00000617910.3
ENST00000629774.2
CDS-3UTR TCA 90 bp TTGTGTGGTCAGCAGAGATTCTCCCAGGAGCGTCAGTGGAGCCCGCCCAGCAGCATCCGTTGGATGCTGTaGTTGTTGAGTTTTCAGGTT +
Preference number: 4 (lower is better)
Translates to: LCGQQRFSQERQWSPPSSIRWML*LLSFQV
Trigger: AACCTGAAAACTCAACAATCACAGCATCCAACGGAT...GCTGCTGGGCGGGCTCCACTGACGCTCCTGGGAGAATCTCTGCTGACCACACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382269.7
ENST00000539820.5
ENST00000617910.3
ENST00000629774.2
CDS-3UTR TCA 90 bp TCTTCCCAGGAGAAGAGGGAAGCCAGATGTAGGCCCTGTGGACACCTGGTGATGTGTTGCAAGCTCCTGTaGTGGGCCTGTATTTGTTCG +
Preference number: 4 (lower is better)
Translates to: SSQEKREARCRPCGHLVMCCKLL*WACICS
Trigger: CGAACAAATACAGGCCCATCACAGGAGCTTGCAACA...CATCACCAGGTGTCCACAGGGCCTACATCTGGCTTCCCTCTTCTCCTGGGAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329066.9
ENST00000422464.5
CDS-3UTR TCA 90 bp ATGAGGACGGCAGCTTTACAGGGTCGCGTGGCTAACGGTGCCCCCGAGACTGCCACCTCATTTGAAACTTaGATGACATGTCTTGTCACC +
Preference number: 4 (lower is better)
Translates to: MRTAALQGRVANGAPETATSFET*MTCLVT
Trigger: GGTGACAAGACATGTCATTCAAGTTTCAAATGAGGT...GGCAGTCTCGGGGGCACCGTTAGCCACGCGACCCTGTAAAGCTGCCGTCCTCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329066.9
ENST00000422464.5
CDS-3UTR TCA 90 bp GAGACAAGTCACTTTGCCTTGTTGGTCCTTAAGGCTCCAGCCTCTCCCTCAGAATGGTGCTCTGTGGTGTaGACGCGATGTCGTGGTCGA +
Preference number: 4 (lower is better)
Translates to: ETSHFALLVLKAPASPSEWCSVV*TRCRGR
Trigger: TCGACCACGACATCGCGTTCACACCACAGAGCACCA...TTCTGAGGGAGAGGCTGGAGCCTTAAGGACCAACAAGGCAAAGTGACTTGTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329066.9
ENST00000422464.5
CDS-3UTR TCA 90 bp ACACAGAACAGGATGGCCTGGCACCTAGGGAAAACAACAGTCTGGTATTTTTGGGGCCCCTCTGCAGGTTaGTGGACGCCAGATCCAAGG +
Preference number: 4 (lower is better)
Translates to: TQNRMAWHLGKTTVWYFWGPSAG*WTPDPR
Trigger: CCTTGGATCTGGCGTCCATCAACCTGCAGAGGGGCC...CCAAAAATACCAGACTGTTGTTTTCCCTAGGTGCCAGGCCATCCTGTTCTGTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000329066.9
ENST00000422464.5
CDS-3UTR TCA 90 bp CTCCTTCCTCTCCTGTGCTTCCAGCCGATCCTCAGATTAAGTGGAAGCAAACGCCAGTGTTGTCACAGATaGCCCGAGACAGGGAGTGCT +
Preference number: 4 (lower is better)
Translates to: LLPLLCFQPILRLSGSKRQCCHR*PETGSA
Trigger: AGCACTCCCTGTCTCGGGTCATCTGTGACAACACTG...GCGTTTGCTTCCACTTAATCTGAGGATCGGCTGGAAGCACAGGAGAGGAAGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422464.5
ENST00000625793.2
CDS-3UTR TCA 90 bp GAATCTCTGGAGGATGAGACAAGTCACTTTGCCTTGTTGGTCCTTAAGGCTCCACTTCCTGGGTGCAAGTaGGCTGCTCCCGGCCTTGGA +
Preference number: 4 (lower is better)
Translates to: ESLEDETSHFALLVLKAPLPGCK*AAPGLG
Trigger: TCCAAGGCCGGGAGCAGCTCACTTGCACCCAGGAAG...TGGAGCCTTAAGGACCAACAAGGCAAAGTGACTTGTCTCATCCTCCAGAGATTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329066.9
ENST00000422464.5
CDS-3UTR TCA 90 bp AAAGAGTCGTACGGTGATTTTGGGAACATGAAGCTGTTCTGCAGTGTCCTGCCACTTCCTGGGTGCAAGTaGGCTGCTCCCGGCCTTGGA +
Preference number: 4 (lower is better)
Translates to: KESYGDFGNMKLFCSVLPLPGCK*AAPGLG
Trigger: TCCAAGGCCGGGAGCAGCTCACTTGCACCCAGGAAG...TGGCAGGACACTGCAGAACAGCTTCATGTTCCCAAAATCACCGTACGACTCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000469607.3
CDS-3UTR TCA 90 bp ACACAGAACAGGATGGCCTGGCACCTAGGGAAAACAACAGTCTGGTATTTTTGGGCTCTCGGCAGCCTGTaGGTATCCCGGCCTTCCATC +
Preference number: 4 (lower is better)
Translates to: TQNRMAWHLGKTTVWYFWALGSL*VSRPSI
Trigger: GATGGAAGGCCGGGATACTCACAGGCTGCCGAGAGC...CCAAAAATACCAGACTGTTGTTTTCCCTAGGTGCCAGGCCATCCTGTTCTGTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329066.9
ENST00000422464.5
CDS-3UTR TCA 90 bp GAAAGTGAGCCCTTAGTTTTGGAACCGGTTTGTACAAATGGAAGGCATCTTCATACCTGCTCCGAGTCCTaGGCTGCGGCCCGCTGCGGT +
Preference number: 4 (lower is better)
Translates to: ESEPLVLEPVCTNGRHLHTCSES*AAARCG
Trigger: ACCGCAGCGGGCCGCAGCTCAGGACTCGGAGCAGGT...ATGAAGATGCCTTCCATTTGTACAAACCGGTTCCAAAACTAAGGGCTCACTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422464.5
ENST00000625793.2
CDS-3UTR TCA 90 bp GTGTCTGAGTTTGCTTTCAATGCCGAAGGACTCCTAACTATTGCCTTGCGTGAGCGCCCTCCTCCTGCCTaGGACTTTGTGCCTGTGACC +
Preference number: 4 (lower is better)
Translates to: VSEFAFNAEGLLTIALRERPPPA*DFVPVT
Trigger: GGTCACAGGCACAAAGTCTCAGGCAGGAGGAGGGCG...CTCACGCAAGGCAATAGTTAGGAGTCCTTCGGCATTGAAAGCAAACTCAGACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422464.5
CDS-3UTR GCA 90 bp GGCAAAGGTTCCTACTCACAGAGTGGGATCTGCAATCCGCAGGCAGGGTCCTTCTTCCATTATCTCTGCTaGTCGGGCAATCACTCCGCT +
Preference number: 4 (lower is better)
Translates to: GKGSYSQSGICNPQAGSFFHYLC*SGNHSA
Trigger: AGCGGAGTGATTGCCCGAGCAGCAGAGATAATGGAA...GAAGGACCCTGCCTGCGGATTGCAGATCCCACTCTGTGAGTAGGAACCTTTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422464.5
CDS-3UTR GCA 90 bp GAGAGTAACTACGACATGGTACTAGATTTACCCGTGTTGGGAAAACAGTCGTCCTGGAGGGAGCCATCGTaGCAGGGCCGTGTTGGAGGC +
Preference number: 4 (lower is better)
Translates to: ESNYDMVLDLPVLGKQSSWREPS*QGRVGG
Trigger: GCCTCCAACACGGCCCTGGCACGATGGCTCCCTCCA...GGACGACTGTTTTCCCAACACGGGTAAATCTAGTACCATGTCGTAGTTACTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR GCA 90 bp CAGGAGAAGAGGGAAGCCAGATGTAGGCCCTGTGGACACCTGGTGATGGGCAGGGATGTATTGTCCCCATaGCATCAGGAGGTCAGAATA +
Preference number: 4 (lower is better)
Translates to: QEKREARCRPCGHLVMGRDVLSP*HQEVRI
Trigger: TATTCTGACCTCCTGATGGCATGGGGACAATACATC...CCTGCCCATCACCAGGTGTCCACAGGGCCTACATCTGGCTTCCCTCTTCTCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329066.9
ENST00000422464.5
CDS-3UTR GCA 90 bp AAAGCCCCAGAAGGAACAAATCAGGCAATGTTTACAAGAAAAGGCCAGACAAATCGCCTTGGTCCCCGGTaGCGCAGGCGGCCGAAGAGC +
Preference number: 4 (lower is better)
Translates to: KAPEGTNQAMFTRKGQTNRLGPR*RRRPKS
Trigger: GCTCTTCGGCCGCCTGCGGCACCGGGGACCAAGGCG...ATTTGTCTGGCCTTTTCTTGTAAACATTGCCTGATTTGTTCCTTCTGGGGCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR GCA 90 bp AATCTCTGGAGGATGAGACAAGTCACTTTGCCTTGTTGGTCCTTAAGGCTCCAGAACCCGTTCATCTGCTaGCGCGGGTTGGCCGTGGAC +
Preference number: 4 (lower is better)
Translates to: NLWRMRQVTLPCWSLRLQNPFIC*RGLAVD
Trigger: GTCCACGGCCAACCCGCGGCAGCAGATGAACGGGTT...CTGGAGCCTTAAGGACCAACAAGGCAAAGTGACTTGTCTCATCCTCCAGAGATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329066.9
ENST00000422464.5
CDS-3UTR GCA 90 bp AAAGAGTCGTACGGTGATTTTGGGAACATGAAGCTGTTCTGCAGTGTCCTGCCAAACCCGTTCATCTGCTaGCGCGGGTTGGCCGTGGAC +
Preference number: 4 (lower is better)
Translates to: KESYGDFGNMKLFCSVLPNPFIC*RGLAVD
Trigger: GTCCACGGCCAACCCGCGGCAGCAGATGAACGGGTT...TGGCAGGACACTGCAGAACAGCTTCATGTTCCCAAAATCACCGTACGACTCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR GCA 90 bp ACTAGATTTACCCGTGTTGGGAAAACAGTCGTCCTGCTGATTTCGGATTTGCCTCTAGGGCCGGGGAGCTaGCATACACGGTGGACGCGT +
Preference number: 4 (lower is better)
Translates to: TRFTRVGKTVVLLISDLPLGPGS*HTRWTR
Trigger: ACGCGTCCACCGTGTATGGCAGCTCCCCGGCCCTAG...AGGCAAATCCGAAATCAGCAGGACGACTGTTTTCCCAACACGGGTAAATCTAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR GCA 90 bp CCTGAGAGTAACTACGACATGGTACTAGATTTACCCGTGTTGGGAAAACAGTCGCCACAGCGTGTGCAGTaGCGTCAGGGAGGGGACCTC +
Preference number: 4 (lower is better)
Translates to: PESNYDMVLDLPVLGKQSPQRVQ*RQGGDL
Trigger: GAGGTCCCCTCCCTGACGGCACTGCACACGCTGTGG...CGACTGTTTTCCCAACACGGGTAAATCTAGTACCATGTCGTAGTTACTCTCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR GCA 90 bp AGTAACTACGACATGGTACTAGATTTACCCGTGTTGGGAAAACAGTCGTCCTGCGCGTCCGCGCTCCAGTaGGCATTGAGGGCCTTGAGC +
Preference number: 4 (lower is better)
Translates to: SNYDMVLDLPVLGKQSSCASALQ*ALRALS
Trigger: GCTCAAGGCCCTCAATGCGCACTGGAGCGCGGACGC...GCAGGACGACTGTTTTCCCAACACGGGTAAATCTAGTACCATGTCGTAGTTACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR GCA 90 bp GTGTTTGGAAAAGAGTCGTACGGTGATTTTGGGAACATGAAGCTGTTCTGCAGTGAGCGCCCACGACCTTaGGCGCCTCCTGGTACACGG +
Preference number: 4 (lower is better)
Translates to: VFGKESYGDFGNMKLFCSERPRP*APPGTR
Trigger: CCGTGTACCAGGAGGCGCGCAAGGTCGTGGGCGCTC...ACTGCAGAACAGCTTCATGTTCCCAAAATCACCGTACGACTCTTTTCCAAACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR GCA 90 bp GGCCAGACAAATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGCCGGGCAGGTCGGGGTaGTCCTGGAAGCTGGCGTCC +
Preference number: 4 (lower is better)
Translates to: GQTNAAITFIHPCLRVTTPGRSG*SWKLAS
Trigger: GGACGCCAGCTTCCAGGAGCACCCCGACCTGCCCGG...CGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATTTGTCTGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000446278.5
CDS-3UTR GCA 90 bp GAAAGTGAGCCCTTAGTTTTGGAACCGGTTTGTACAAATGGAAGGCATCTTCATCCGGGCAGGTCGGGGTaGTCCTGGAAGCTGGCGTCC +
Preference number: 4 (lower is better)
Translates to: ESEPLVLEPVCTNGRHLHPGRSG*SWKLAS
Trigger: GGACGCCAGCTTCCAGGAGCACCCCGACCTGCCCGG...ATGAAGATGCCTTCCATTTGTACAAACCGGTTCCAAAACTAAGGGCTCACTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422464.5
ENST00000625793.2
CDS-3UTR GCA 90 bp CGACATGGTACTAGATTTACCCGTGTTGGGAAAACAGTCGTCCTGCTGATTTCGTGCTGGCGATGGCTGTaGTCAGGTCAGCGGGGGTCT +
Preference number: 4 (lower is better)
Translates to: RHGTRFTRVGKTVVLLISCWRWL*SGQRGS
Trigger: AGACCCCCGCTGACCTGAGCACAGCCATCGCCAGCA...CGAAATCAGCAGGACGACTGTTTTCCCAACACGGGTAAATCTAGTACCATGTCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000469607.3
CDS-3UTR GCA 90 bp AAAGAGTCGTACGGTGATTTTGGGAACATGAAGCTGTTCTGCAGTGTCCTGCCATGTCGGCCACGCTCCTaGTGGCGATGGCTGTGCTCA +
Preference number: 4 (lower is better)
Translates to: KESYGDFGNMKLFCSVLPCRPRS*WRWLCS
Trigger: TGAGCACAGCCATCGCCAGCAGGAGCGTGGCCGACA...TGGCAGGACACTGCAGAACAGCTTCATGTTCCCAAAATCACCGTACGACTCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000469607.3
CDS-3UTR GCA 90 bp AGTAACTACGACATGGTACTAGATTTACCCGTGTTGGGAAAACAGTCGTCCTGCACCGCCGGGGCAGAGTaGAGACGAGCACGGCATCAG +
Preference number: 4 (lower is better)
Translates to: SNYDMVLDLPVLGKQSSCTAGAE*RRARHQ
Trigger: CTGATGCCGTGCTCGTCTGCACTCTGCCCCGGCGGT...GCAGGACGACTGTTTTCCCAACACGGGTAAATCTAGTACCATGTCGTAGTTACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329066.9
ENST00000422464.5
CDS-3UTR GCA 90 bp ACACAGAACAGGATGGCCTGGCACCTAGGGAAAACAACAGTCTGGTATTTTTGGGGAGTAAGAGCAGTGTaGGGCAGGGCGGCTGCTGGA +
Preference number: 4 (lower is better)
Translates to: TQNRMAWHLGKTTVWYFWGVRAV*GRAAAG
Trigger: TCCAGCAGCCGCCCTGCCGCACACTGCTCTTACTCC...CCAAAAATACCAGACTGTTGTTTTCCCTAGGTGCCAGGCCATCCTGTTCTGTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000329066.9
ENST00000422464.5
CDS-3UTR GCA 90 bp CTCCTTCCTCTCCTGTGCTTCCAGCCGATCCTCAGATTAAGTGGAAGCAAACGCTGCGTGGGAGCCAGGTaGAAAGACGAATGTGCTCTC +
Preference number: 4 (lower is better)
Translates to: LLPLLCFQPILRLSGSKRCVGAR*KDECAL
Trigger: GAGAGCACATTCGTCTTTGCACCTGGCTCCCACGCA...GCGTTTGCTTCCACTTAATCTGAGGATCGGCTGGAAGCACAGGAGAGGAAGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422464.5
CDS-3UTR GCA 90 bp CTGTGCTTCCAGCCGATCCTCAGATTAAGTGGAAGCAAACGCCTGAAAGTGAGCGGGACTTGCTGGCACTaGCCTTGCTGTGGCTGGAAA +
Preference number: 4 (lower is better)
Translates to: LCFQPILRLSGSKRLKVSGTCWH*PCCGWK
Trigger: TTTCCAGCCACAGCAAGGGCAGTGCCAGCAAGTCCC...GCTCACTTTCAGGCGTTTGCTTCCACTTAATCTGAGGATCGGCTGGAAGCACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422464.5
CDS-3UTR GCA 90 bp TGGGATCTGCAATCCGCAGGCAGGGTCCTTCAGGAAGAAGCCGTGCTGAGCACACGTCTGAATTCTGACTaGTCCAGTAACAGCACACAC +
Preference number: 4 (lower is better)
Translates to: WDLQSAGRVLQEEAVLSTRLNSD*SSNSTH
Trigger: GTGTGTGCTGTTACTGGAGCAGTCAGAATTCAGACG...TGTGCTCAGCACGGCTTCTTCCTGAAGGACCCTGCCTGCGGATTGCAGATCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422464.5
CDS-3UTR CCA 90 bp CGACATGGTACTAGATTTACCCGTGTTGGGAAAACAGTCGTCCTGCTGATTTCGGCATCGTGGCGTACATaGCGGTGTCCACCAGGCGCT +
Preference number: 4 (lower is better)
Translates to: RHGTRFTRVGKTVVLLISASWRT*RCPPGA
Trigger: AGCGCCTGGTGGACACCGCCATGTACGCCACGATGC...CGAAATCAGCAGGACGACTGTTTTCCCAACACGGGTAAATCTAGTACCATGTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
CDS-3UTR CCA 90 bp AGCAGGAACTCACTGCTGCCGGCTGAGGCCCTGGTCTTGAGGTTGTTAAAATGTGGTTTCTCTGCATCGTaGCGTACATGGCGGTGTCCA +
Preference number: 4 (lower is better)
Translates to: SRNSLLPAEALVLRLLKCGFSAS*RTWRCP
Trigger: TGGACACCGCCATGTACGCCACGATGCAGAGAAACC...ACATTTTAACAACCTCAAGACCAGGGCCTCAGCCGGCAGCAGTGAGTTCCTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382269.7
ENST00000539820.5
ENST00000617910.3
ENST00000629774.2
CDS-3UTR CCA 90 bp TTGTGTGGTCAGCAGAGATTCTCCCAGGAGCGTCAGTGGAGCCCGCCCAGCAGCAGACAGAAGCTGAGCTaGAGAAAGGATTCCTCTTTT +
Preference number: 4 (lower is better)
Translates to: LCGQQRFSQERQWSPPSSRQKLS*RKDSSF
Trigger: AAAAGAGGAATCCTTTCTCCAGCTCAGCTTCTGTCT...GCTGCTGGGCGGGCTCCACTGACGCTCCTGGGAGAATCTCTGCTGACCACACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382269.7
ENST00000539820.5
ENST00000617910.3
ENST00000629774.2
CDS-3UTR CCA 90 bp CTCCTTCCTCTCCTGTGCTTCCAGCCGATCCTCAGATTAAGTGGAAGCAAACGCCGCCAGGCAAGTGTTTaGGCATTTTGGGGGCAGCAT +
Preference number: 4 (lower is better)
Translates to: LLPLLCFQPILRLSGSKRRQASV*AFWGQH
Trigger: ATGCTGCCCCCAAAATGCCCAAACACTTGCCTGGCG...GCGTTTGCTTCCACTTAATCTGAGGATCGGCTGGAAGCACAGGAGAGGAAGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422464.5
ENST00000625793.2
CDS-3UTR CCA 90 bp CCTGTGCTTCCAGCCGATCCTCAGATTAAGTGGAAGCAAACGCCTGAAAGTGAGGCGCCCCATCTGGGGTaGTCTCTGTTGTTGCAAGCT +
Preference number: 4 (lower is better)
Translates to: PVLPADPQIKWKQTPESEAPHLG*SLLLQA
Trigger: AGCTTGCAACAACAGAGACCACCCCAGATGGGGCGC...CTCACTTTCAGGCGTTTGCTTCCACTTAATCTGAGGATCGGCTGGAAGCACAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422464.5
ENST00000625793.2
CDS-3UTR CCA 90 bp AATTTTGAAACATGCGATCATTATGAGGAAGCGTGCGCCCCATGCCGTGCAGCAGCCGTCCTCATAGACTaGAGGGAGCCATCGTGCCAG +
Preference number: 4 (lower is better)
Translates to: NFETCDHYEEACAPCRAAAVLID*REPSCQ
Trigger: CTGGCACGATGGCTCCCTCCAGTCTATGAGGACGGC...TGCTGCACGGCATGGGGCGCACGCTTCCTCATAATGATCGCATGTTTCAAAATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422464.5
CDS-3UTR CCA 90 bp GGCCAGACAAATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGCCAAAGAGCGCGCCTTaGTCCCCGGTGCCGCAGGCG +
Preference number: 4 (lower is better)
Translates to: GQTNAAITFIHPCLRVTTPKSAP*SPVPQA
Trigger: CGCCTGCGGCACCGGGGACCAAGGCGCGCTCTTTGG...CGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATTTGTCTGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR CCA 90 bp ACTGTTCTGCTCTCTGCTTCTCTCAGTTCAAAAGTCAGACTTACACAAGTGAGTCCAAAGAGCGCGCCTTaGTCCCCGGTGCCGCAGGCG +
Preference number: 4 (lower is better)
Translates to: TVLLSASLSSKVRLTQVSPKSAP*SPVPQA
Trigger: CGCCTGCGGCACCGGGGACCAAGGCGCGCTCTTTGG...ACTCACTTGTGTAAGTCTGACTTTTGAACTGAGAGAAGCAGAGAGCAGAACAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422464.5
ENST00000625793.2
CDS-3UTR CCA 90 bp TCATCCATGCCTGAGAGTAACTACGACATGGTACTAGATTTACCCGTGTTGGGAGCCGCGGGTTGGCCGTaGACAGGTTCCCAAAGAGCG +
Preference number: 4 (lower is better)
Translates to: SSMPESNYDMVLDLPVLGAAGWP*TGSQRA
Trigger: CGCTCTTTGGGAACCTGTCCACGGCCAACCCGCGGC...TCCCAACACGGGTAAATCTAGTACCATGTCGTAGTTACTCTCAGGCATGGATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR CCA 90 bp GATTTGCCTGTGTTTGGAAAAGAGTCGTACGGTGATTTTGGGAACATGAAGCTGACCTTGCGCGCCTCCTaGTACACGGCGTCCGCGCTC +
Preference number: 4 (lower is better)
Translates to: DLPVFGKESYGDFGNMKLTLRAS*YTASAL
Trigger: GAGCGCGGACGCCGTGTACCAGGAGGCGCGCAAGGT...CAGCTTCATGTTCCCAAAATCACCGTACGACTCTTTTCCAAACACAGGCAAATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR CCA 90 bp TTGCCTGTGTTTGGAAAAGAGTCGTACGGTGATTTTGGGAACATGAAGCTGTTCACCTTGCGCGCCTCCTaGTACACGGCGTCCGCGCTC +
Preference number: 4 (lower is better)
Translates to: LPVFGKESYGDFGNMKLFTLRAS*YTASAL
Trigger: GAGCGCGGACGCCGTGTACCAGGAGGCGCGCAAGGT...GAACAGCTTCATGTTCCCAAAATCACCGTACGACTCTTTTCCAAACACAGGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR CCA 90 bp TCATCCATGCCTGAGAGTAACTACGACATGGTACTAGATTTACCCGTGTTGGGAGGACCCACGTACTGCTaGAAGGCCTCGGGTCCCAGG +
Preference number: 4 (lower is better)
Translates to: SSMPESNYDMVLDLPVLGGPTYC*KASGPR
Trigger: CCTGGGACCCGAGGCCTTCCAGCAGTACGTGGGTCC...TCCCAACACGGGTAAATCTAGTACCATGTCGTAGTTACTCTCAGGCATGGATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR CCA 90 bp GAGAGTAACTACGACATGGTACTAGATTTACCCGTGTTGGGAAAACAGTCGTCCGGACCCACGTACTGCTaGAAGGCCTCGGGTCCCAGG +
Preference number: 4 (lower is better)
Translates to: ESNYDMVLDLPVLGKQSSGPTYC*KASGPR
Trigger: CCTGGGACCCGAGGCCTTCCAGCAGTACGTGGGTCC...GGACGACTGTTTTCCCAACACGGGTAAATCTAGTACCATGTCGTAGTTACTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR CCA 90 bp CTACGACATGGTACTAGATTTACCCGTGTTGGGAAAACAGTCGTCCTGCTGATTGGGTGGATCGTGGCATaGCCGAAGCGGAAGGCGGCT +
Preference number: 4 (lower is better)
Translates to: LRHGTRFTRVGKTVVLLIGWIVA*PKRKAA
Trigger: AGCCGCCTTCCGCTTCGGCCATGCCACGATCCACCC...AATCAGCAGGACGACTGTTTTCCCAACACGGGTAAATCTAGTACCATGTCGTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000469607.3
CDS-3UTR CCA 90 bp GGTACTAGATTTACCCGTGTTGGGAAAACAGTCGTCCTGCTGATTTCGGATTTGGGGTGGATCGTGGCATaGCCGAAGCGGAAGGCGGCT +
Preference number: 4 (lower is better)
Translates to: GTRFTRVGKTVVLLISDLGWIVA*PKRKAA
Trigger: AGCCGCCTTCCGCTTCGGCCATGCCACGATCCACCC...CAAATCCGAAATCAGCAGGACGACTGTTTTCCCAACACGGGTAAATCTAGTACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000469607.3
CDS-3UTR CCA 90 bp CCTGTGTTTGGAAAAGAGTCGTACGGTGATTTTGGGAACATGAAGCTGTTCTGCGGGTGGATCGTGGCATaGCCGAAGCGGAAGGCGGCT +
Preference number: 4 (lower is better)
Translates to: PVFGKESYGDFGNMKLFCGWIVA*PKRKAA
Trigger: AGCCGCCTTCCGCTTCGGCCATGCCACGATCCACCC...GCAGAACAGCTTCATGTTCCCAAAATCACCGTACGACTCTTTTCCAAACACAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000469607.3
CDS-3UTR CCA 90 bp GAGAGTAACTACGACATGGTACTAGATTTACCCGTGTTGGGAAAACAGTCGTCCCCAGCGGGTGGATCGTaGCATGGCCGAAGCGGAAGG +
Preference number: 4 (lower is better)
Translates to: ESNYDMVLDLPVLGKQSSPAGGS*HGRSGR
Trigger: CCTTCCGCTTCGGCCATGCCACGATCCACCCGCTGG...GGACGACTGTTTTCCCAACACGGGTAAATCTAGTACCATGTCGTAGTTACTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000469607.3
CDS-3UTR CCA 90 bp ACTAGATTTACCCGTGTTGGGAAAACAGTCGTCCTGCTGATTTCGGATTTGCCTCCAGCGGGTGGATCGTaGCATGGCCGAAGCGGAAGG +
Preference number: 4 (lower is better)
Translates to: TRFTRVGKTVVLLISDLPPAGGS*HGRSGR
Trigger: CCTTCCGCTTCGGCCATGCCACGATCCACCCGCTGG...AGGCAAATCCGAAATCAGCAGGACGACTGTTTTCCCAACACGGGTAAATCTAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000469607.3
CDS-3UTR CCA 90 bp GTGTCTGAGTTTGCTTTCAATGCCGAAGGACTCCTAACTATTGCCTTGCGTGAGGGTGCTCCTGGAAGCTaGCGTCCAGCCTCCTCACCA +
Preference number: 4 (lower is better)
Translates to: VSEFAFNAEGLLTIALREGAPGS*RPASSP
Trigger: TGGTGAGGAGGCTGGACGCCAGCTTCCAGGAGCACC...CTCACGCAAGGCAATAGTTAGGAGTCCTTCGGCATTGAAAGCAAACTCAGACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329066.9
ENST00000422464.5
CDS-3UTR CCA 90 bp CGACATGGTACTAGATTTACCCGTGTTGGGAAAACAGTCGTCCTGCTGATTTCGGGTGCTCCTGGAAGCTaGCGTCCAGCCTCCTCACCA +
Preference number: 4 (lower is better)
Translates to: RHGTRFTRVGKTVVLLISGAPGS*RPASSP
Trigger: TGGTGAGGAGGCTGGACGCCAGCTTCCAGGAGCACC...CGAAATCAGCAGGACGACTGTTTTCCCAACACGGGTAAATCTAGTACCATGTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000469607.3
CDS-3UTR CCA 90 bp ACTAGATTTACCCGTGTTGGGAAAACAGTCGTCCTGCTGATTTCGGATTTGCCTAGGTCGGGGTGCTCCTaGAAGCTGGCGTCCAGCCTC +
Preference number: 4 (lower is better)
Translates to: TRFTRVGKTVVLLISDLPRSGCS*KLASSL
Trigger: GAGGCTGGACGCCAGCTTCCAGGAGCACCCCGACCT...AGGCAAATCCGAAATCAGCAGGACGACTGTTTTCCCAACACGGGTAAATCTAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000469607.3
CDS-3UTR CCA 90 bp CTACGACATGGTACTAGATTTACCCGTGTTGGGAAAACAGTCGTCCTGCTGATTAGGTCGGGGTGCTCCTaGAAGCTGGCGTCCAGCCTC +
Preference number: 4 (lower is better)
Translates to: LRHGTRFTRVGKTVVLLIRSGCS*KLASSL
Trigger: GAGGCTGGACGCCAGCTTCCAGGAGCACCCCGACCT...AATCAGCAGGACGACTGTTTTCCCAACACGGGTAAATCTAGTACCATGTCGTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000469607.3
CDS-3UTR CCA 90 bp TTGGTGAATCTCTGGAGGATGAGACAAGTCACTTTGCCTTGTTGGTCCTTAAGGGGGCTGAAGAAAGCCTaGTGCAGCCACAGCCCGGGC +
Preference number: 4 (lower is better)
Translates to: LVNLWRMRQVTLPCWSLRGLKKA*CSHSPG
Trigger: GCCCGGGCTGTGGCTGCACCAGGCTTTCTTCAGCCC...CCTTAAGGACCAACAAGGCAAAGTGACTTGTCTCATCCTCCAGAGATTCACCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329066.9
ENST00000422464.5
CDS-3UTR CCA 90 bp AGTAACTACGACATGGTACTAGATTTACCCGTGTTGGGAAAACAGTCGTCCTGCGGGCTGAAGAAAGCCTaGTGCAGCCACAGCCCGGGC +
Preference number: 4 (lower is better)
Translates to: SNYDMVLDLPVLGKQSSCGLKKA*CSHSPG
Trigger: GCCCGGGCTGTGGCTGCACCAGGCTTTCTTCAGCCC...GCAGGACGACTGTTTTCCCAACACGGGTAAATCTAGTACCATGTCGTAGTTACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000469607.3
CDS-3UTR CCA 90 bp ACTAGATTTACCCGTGTTGGGAAAACAGTCGTCCTGCTGATTTCGGATTTGCCTGGGCTGAAGAAAGCCTaGTGCAGCCACAGCCCGGGC +
Preference number: 4 (lower is better)
Translates to: TRFTRVGKTVVLLISDLPGLKKA*CSHSPG
Trigger: GCCCGGGCTGTGGCTGCACCAGGCTTTCTTCAGCCC...AGGCAAATCCGAAATCAGCAGGACGACTGTTTTCCCAACACGGGTAAATCTAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000469607.3
CDS-3UTR CCA 90 bp ACACAGAACAGGATGGCCTGGCACCTAGGGAAAACAACAGTCTGGTATTTTTGGCCACTCATTGTAACCTaGCAGCCCGTGGTCCCGGCC +
Preference number: 4 (lower is better)
Translates to: TQNRMAWHLGKTTVWYFWPLIVT*QPVVPA
Trigger: GGCCGGGACCACGGGCTGCCAGGTTACAATGAGTGG...CCAAAAATACCAGACTGTTGTTTTCCCTAGGTGCCAGGCCATCCTGTTCTGTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329066.9
ENST00000422464.5
CDS-3UTR CCA 90 bp CTACGACATGGTACTAGATTTACCCGTGTTGGGAAAACAGTCGTCCTGCTGATTCGCTCCTGCTGGCGATaGCTGTGCTCAGGTCAGCGG +
Preference number: 4 (lower is better)
Translates to: LRHGTRFTRVGKTVVLLIRSCWR*LCSGQR
Trigger: CCGCTGACCTGAGCACAGCCATCGCCAGCAGGAGCG...AATCAGCAGGACGACTGTTTTCCCAACACGGGTAAATCTAGTACCATGTCGTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000469607.3
CDS-3UTR CCA 90 bp GAGAGTAACTACGACATGGTACTAGATTTACCCGTGTTGGGAAAACAGTCGTCCCGCTCCTGCTGGCGATaGCTGTGCTCAGGTCAGCGG +
Preference number: 4 (lower is better)
Translates to: ESNYDMVLDLPVLGKQSSRSCWR*LCSGQR
Trigger: CCGCTGACCTGAGCACAGCCATCGCCAGCAGGAGCG...GGACGACTGTTTTCCCAACACGGGTAAATCTAGTACCATGTCGTAGTTACTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000469607.3
CDS-3UTR CCA 90 bp CCTGAGAGTAACTACGACATGGTACTAGATTTACCCGTGTTGGGAAAACAGTCGCGGCCACGCTCCTGCTaGCGATGGCTGTGCTCAGGT +
Preference number: 4 (lower is better)
Translates to: PESNYDMVLDLPVLGKQSRPRSC*RWLCSG
Trigger: ACCTGAGCACAGCCATCGCCAGCAGGAGCGTGGCCG...CGACTGTTTTCCCAACACGGGTAAATCTAGTACCATGTCGTAGTTACTCTCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000469607.3
CDS-3UTR CCA 90 bp CTGTGCTTCCAGCCGATCCTCAGATTAAGTGGAAGCAAACGCCTGAAAGTGAGCGAGCAGCCAGCGACATaGAGATCCAAGTCACCCGAG +
Preference number: 4 (lower is better)
Translates to: LCFQPILRLSGSKRLKVSEQPAT*RSKSPE
Trigger: CTCGGGTGACTTGGATCTCCATGTCGCTGGCTGCTC...GCTCACTTTCAGGCGTTTGCTTCCACTTAATCTGAGGATCGGCTGGAAGCACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422464.5
ENST00000625793.2
CDS-3UTR CCA 90 bp CCTGTGCTTCCAGCCGATCCTCAGATTAAGTGGAAGCAAACGCCTGAAAGTGAGGAGCAGCCAGCGACATaGAGATCCAAGTCACCCGAG +
Preference number: 4 (lower is better)
Translates to: PVLPADPQIKWKQTPESEEQPAT*RSKSPE
Trigger: CTCGGGTGACTTGGATCTCCATGTCGCTGGCTGCTC...CTCACTTTCAGGCGTTTGCTTCCACTTAATCTGAGGATCGGCTGGAAGCACAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422464.5
ENST00000625793.2
CDS-3UTR CCA 90 bp AAGTTTCTGGCTTCCGGACAAATGCTTGTTTGCAGGAGGCCACAGAGGATCCACTTCCTCCGGGATCACTaGGCTGTGTTCCCCGTGAGT +
Preference number: 4 (lower is better)
Translates to: KFLASGQMLVCRRPQRIHFLRDH*AVFPVS
Trigger: ACTCACGGGGAACACAGCCCAGTGATCCCGGAGGAA...GTGGATCCTCTGTGGCCTCCTGCAAACAAGCATTTGTCCGGAAGCCAGAAACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422464.5
CDS-3UTR CCA 90 bp AATCTCTGGAGGATGAGACAAGTCACTTTGCCTTGTTGGTCCTTAAGGCTCCAGGAGGGCTGCCTGGGCTaGGACCCAGCACTCTGGAAT +
Preference number: 4 (lower is better)
Translates to: NLWRMRQVTLPCWSLRLQEGCLG*DPALWN
Trigger: ATTCCAGAGTGCTGGGTCCCAGCCCAGGCAGCCCTC...CTGGAGCCTTAAGGACCAACAAGGCAAAGTGACTTGTCTCATCCTCCAGAGATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329066.9
ENST00000422464.5
CDS-3UTR CCA 90 bp AAAGAGTCGTACGGTGATTTTGGGAACATGAAGCTGTTCTGCAGTGTCCTGCCAGAGGGCTGCCTGGGCTaGGACCCAGCACTCTGGAAT +
Preference number: 4 (lower is better)
Translates to: KESYGDFGNMKLFCSVLPEGCLG*DPALWN
Trigger: ATTCCAGAGTGCTGGGTCCCAGCCCAGGCAGCCCTC...TGGCAGGACACTGCAGAACAGCTTCATGTTCCCAAAATCACCGTACGACTCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329066.9
ENST00000422464.5
CDS-3UTR CCA 90 bp GTCAGCAGAGATTCTCCCAGGAGCGTCAGTGGAGCCCGCCCAGCAGCTGGGGCAGAGAAAAGCTTTGACTaGCTTCAGTTTCGCATTATT +
Preference number: 4 (lower is better)
Translates to: VSRDSPRSVSGARPAAGAEKSFD*LQFRII
Trigger: AATAATGCGAAACTGAAGCCAGTCAAAGCTTTTCTC...TGCCCCAGCTGCTGGGCGGGCTCCACTGACGCTCCTGGGAGAATCTCTGCTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382269.7
ENST00000539820.5
ENST00000617910.3
ENST00000629774.2
CDS-3UTR CCA 90 bp AATCTCTGGAGGATGAGACAAGTCACTTTGCCTTGTTGGTCCTTAAGGCTCCAGACATGCGGCATGGTGTaGCCCACCTGCTCCGAGTCC +
Preference number: 4 (lower is better)
Translates to: NLWRMRQVTLPCWSLRLQTCGMV*PTCSES
Trigger: GGACTCGGAGCAGGTGGGCCACACCATGCCGCATGT...CTGGAGCCTTAAGGACCAACAAGGCAAAGTGACTTGTCTCATCCTCCAGAGATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422464.5
CDS-3UTR CCA 90 bp CCTCTCCTGTGCTTCCAGCCGATCCTCAGATTAAGTGGAAGCAAACGCCTGAAACACTGCGGTGGCAGCTaGAAACATGCGGCATGGTGT +
Preference number: 4 (lower is better)
Translates to: PLLCFQPILRLSGSKRLKHCGGS*KHAAWC
Trigger: ACACCATGCCGCATGTTTCCAGCTGCCACCGCAGTG...TTTCAGGCGTTTGCTTCCACTTAATCTGAGGATCGGCTGGAAGCACAGGAGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422464.5
ENST00000625793.2
3UTR CAA 72 bp GCTGGAGGCAGAAGCCTGGGGTCTGAGGCTCATGTGTaGGTGAATCTCTGGAGGATGAGACAAGTCACTTTG +
Preference number: 4 (lower is better)
Translates to: AGGRSLGSEAHV*VNLWRMRQVTL
Trigger: CAAAGTGACTTGTCTCATCCTCCAGAGATTCACCAACACATGAGCCTCAGACCCCAGGCTTCTGCCTCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329066.9
ENST00000422464.5
CDS-3UTR TCA 90 bp AGCAGGAACTCACTGCTGCCGGCTGAGGCCCTGGTCTTGAGGTTGTTAAAATGTCTTTCCCTCTCGAGATaGAGGGGAAGAAGGCTTCTG +
Preference number: 4 (lower is better)
Translates to: SRNSLLPAEALVLRLLKCLSLSR*RGRRLL
Trigger: CAGAAGCCTTCTTCCCCTTCATCTCGAGAGGGAAAG...ACATTTTAACAACCTCAAGACCAGGGCCTCAGCCGGCAGCAGTGAGTTCCTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382269.7
ENST00000539820.5
ENST00000617910.3
ENST00000629774.2
CDS-3UTR TCA 90 bp CCAGTGCCAATGTCATTGTGTGGTCAGCAGAGATTCTCCCAGGAGCGTCAGTGGTGTTGCAAGCTCCTGTaGTGGGCCTGTATTTGTTCG +
Preference number: 4 (lower is better)
Translates to: PVPMSLCGQQRFSQERQWCCKLL*WACICS
Trigger: CGAACAAATACAGGCCCATCACAGGAGCTTGCAACA...CCACTGACGCTCCTGGGAGAATCTCTGCTGACCACACAATGACATTGGCACTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382269.7
ENST00000539820.5
ENST00000617910.3
ENST00000629774.2
CDS-3UTR TCA 90 bp CAGGACCCAGGGGCAGGCTTTGCAGGTGGATGTAGACGTCATTGGAGAAAAGCTTGTTGCAAGCTCCTGTaGTGGGCCTGTATTTGTTCG +
Preference number: 4 (lower is better)
Translates to: QDPGAGFAGGCRRHWRKACCKLL*WACICS
Trigger: CGAACAAATACAGGCCCATCACAGGAGCTTGCAACA...AGCTTTTCTCCAATGACGTCTACATCCACCTGCAAAGCCTGCCCCTGGGTCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382269.7
ENST00000539820.5
ENST00000617910.3
ENST00000629774.2
CDS-3UTR TCA 90 bp ACACTTGATACAAGACAGAAGGGCCTGGACAGGAGCTCTTTTCACAAAGGACCGTGGTGCTCTGTGGTGTaGACGCGATGTCGTGGTCGA +
Preference number: 4 (lower is better)
Translates to: TLDTRQKGLDRSSFHKGPWCSVV*TRCRGR
Trigger: TCGACCACGACATCGCGTTCACACCACAGAGCACCA...CGGTCCTTTGTGAAAAGAGCTCCTGTCCAGGCCCTTCTGTCTTGTATCAAGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422464.5
CDS-3UTR TCA 90 bp CTGTGCTTCCAGCCGATCCTCAGATTAAGTGGAAGCAAACGCCTGAAAGTGAGCGTAATGTCCATGGGCTaGAGAAAGCCTGGTGCAGCC +
Preference number: 4 (lower is better)
Translates to: LCFQPILRLSGSKRLKVSVMSMG*RKPGAA
Trigger: GGCTGCACCAGGCTTTCTTCAGCCCATGGACATTAC...GCTCACTTTCAGGCGTTTGCTTCCACTTAATCTGAGGATCGGCTGGAAGCACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422464.5
ENST00000625793.2
CDS-3UTR TCA 90 bp GTGCTTCCAGCCGATCCTCAGATTAAGTGGAAGCAAACGCCTGAAAGTGAGCCCTCCTCGTTCATCAGCTaGTCCTGCACCTGCAGTTTG +
Preference number: 4 (lower is better)
Translates to: VLPADPQIKWKQTPESEPSSFIS*SCTCSL
Trigger: CAAACTGCAGGTGCAGGATCAGCTGATGAACGAGGA...GGGCTCACTTTCAGGCGTTTGCTTCCACTTAATCTGAGGATCGGCTGGAAGCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422464.5
ENST00000625793.2
CDS-3UTR TCA 90 bp ACTAGATTTACCCGTGTTGGGAAAACAGTCGTCCTGCTGATTTCGGATTTGCCTGGCCCCTCTGCAGGTTaGTGGACGCCAGATCCAAGG +
Preference number: 4 (lower is better)
Translates to: TRFTRVGKTVVLLISDLPGPSAG*WTPDPR
Trigger: CCTTGGATCTGGCGTCCATCAACCTGCAGAGGGGCC...AGGCAAATCCGAAATCAGCAGGACGACTGTTTTCCCAACACGGGTAAATCTAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000422464.5
CDS-3UTR TCA 90 bp GGTACTAGATTTACCCGTGTTGGGAAAACAGTCGTCCTGCTGATTTCGGATTTGGGCCCCTCTGCAGGTTaGTGGACGCCAGATCCAAGG +
Preference number: 4 (lower is better)
Translates to: GTRFTRVGKTVVLLISDLGPSAG*WTPDPR
Trigger: CCTTGGATCTGGCGTCCATCAACCTGCAGAGGGGCC...CAAATCCGAAATCAGCAGGACGACTGTTTTCCCAACACGGGTAAATCTAGTACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000422464.5
CDS-3UTR TCA 90 bp CCTGGACAGGAGCTCTTTTCACAAAGGACCGCTGGCGAGATGAGCCATCCTTCTCCAGGTTCATGCCAGTaGTGCTGTCACAAGACTCAA +
Preference number: 4 (lower is better)
Translates to: PGQELFSQRTAGEMSHPSPGSCQ*CCHKTQ
Trigger: TTGAGTCTTGTGACAGCATCACTGGCATGAACCTGG...AGAAGGATGGCTCATCTCGCCAGCGGTCCTTTGTGAAAAGAGCTCCTGTCCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422464.5
CDS-3UTR TCA 90 bp TCATCCATGCCTGAGAGTAACTACGACATGGTACTAGATTTACCCGTGTTGGGACTTCCTGGGTGCAAGTaGGCTGCTCCCGGCCTTGGA +
Preference number: 4 (lower is better)
Translates to: SSMPESNYDMVLDLPVLGLPGCK*AAPGLG
Trigger: TCCAAGGCCGGGAGCAGCTCACTTGCACCCAGGAAG...TCCCAACACGGGTAAATCTAGTACCATGTCGTAGTTACTCTCAGGCATGGATGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000469607.3
CDS-3UTR TCA 90 bp TGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACATGGTACTATGCGGCCCGCTGCGGTaGGGTCCCTACGGCCTGGTG +
Preference number: 4 (lower is better)
Translates to: CSYNIYSSMPESNYDMVLCGPLR*GPYGLV
Trigger: CACCAGGCCGTAGGGACCTCACCGCAGCGGGCCGCA...TAGTACCATGTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000469607.3
CDS-3UTR TCA 90 bp AGGCCAGACAAATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACTCCTGCTCCGAGTCCTaGGCTGCGGCCCGCTGCGGT +
Preference number: 4 (lower is better)
Translates to: RPDKCSYNIYSSMPESNYSCSES*AAARCG
Trigger: ACCGCAGCGGGCCGCAGCTCAGGACTCGGAGCAGGA...GTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATTTGTCTGGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
CDS-3UTR TCA 90 bp GAGAGTAACTACGACATGGTACTAGATTTACCCGTGTTGGGAAAACAGTCGTCCGCTCTCGGCAGCCTGTaGGTATCCCGGCCTTCCATC +
Preference number: 4 (lower is better)
Translates to: ESNYDMVLDLPVLGKQSSALGSL*VSRPSI
Trigger: GATGGAAGGCCGGGATACTCACAGGCTGCCGAGAGC...GGACGACTGTTTTCCCAACACGGGTAAATCTAGTACCATGTCGTAGTTACTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000469607.3
CDS-3UTR TCA 90 bp TTGGTGAATCTCTGGAGGATGAGACAAGTCACTTTGCCTTGTTGGTCCTTAAGGCCTGTGGACACCTGGTaGTGGGCAGGGGGTGTGGAA +
Preference number: 4 (lower is better)
Translates to: LVNLWRMRQVTLPCWSLRPVDTW*WAGGVE
Trigger: TTCCACACCCCCTGCCCATCACCAGGTGTCCACAGG...CCTTAAGGACCAACAAGGCAAAGTGACTTGTCTCATCCTCCAGAGATTCACCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329066.9
ENST00000422464.5
CDS-3UTR TCA 90 bp GTTGGTGAATCTCTGGAGGATGAGACAAGTCACTTTGCCTTGTTGGTCCTTAAGCCTGTGGACACCTGGTaGTGGGCAGGGGGTGTGGAA +
Preference number: 4 (lower is better)
Translates to: VGESLEDETSHFALLVLKPVDTW*WAGGVE
Trigger: TTCCACACCCCCTGCCCATCACCAGGTGTCCACAGG...CTTAAGGACCAACAAGGCAAAGTGACTTGTCTCATCCTCCAGAGATTCACCAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329066.9
ENST00000422464.5
CDS-3UTR TCA 90 bp TGGAGAAAAGCTTTGACTGGCTTCAGTTTCGCATTATTTGGTCTGTCCTGCTGGCTCACTGCTGCCGGCTaGGGCCCTGGTCTTGAGGTT +
Preference number: 4 (lower is better)
Translates to: WRKALTGFSFALFGLSCWLTAAG*GPGLEV
Trigger: AACCTCAAGACCAGGGCCTCAGCCGGCAGCAGTGAG...CCAGCAGGACAGACCAAATAATGCGAAACTGAAGCCAGTCAAAGCTTTTCTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382269.7
ENST00000539820.5
ENST00000617910.3
ENST00000629774.2
CDS-3UTR GCA 90 bp CAGGACCCAGGGGCAGGCTTTGCAGGTGGATGTAGACGTCATTGGAGAAAAGCTTTCCATTATCTCTGCTaGTCGGGCAATCACTCCGCT +
Preference number: 4 (lower is better)
Translates to: QDPGAGFAGGCRRHWRKAFHYLC*SGNHSA
Trigger: AGCGGAGTGATTGCCCGAGCAGCAGAGATAATGGAA...AGCTTTTCTCCAATGACGTCTACATCCACCTGCAAAGCCTGCCCCTGGGTCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382269.7
ENST00000539820.5
ENST00000617910.3
ENST00000629774.2
CDS-3UTR GCA 90 bp GATTTGCCTGTGTTTGGAAAAGAGTCGTACGGTGATTTTGGGAACATGAAGCTGTGGAGGGAGCCATCGTaGCAGGGCCGTGTTGGAGGC +
Preference number: 4 (lower is better)
Translates to: DLPVFGKESYGDFGNMKLWREPS*QGRVGG
Trigger: GCCTCCAACACGGCCCTGGCACGATGGCTCCCTCCA...CAGCTTCATGTTCCCAAAATCACCGTACGACTCTTTTCCAAACACAGGCAAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR GCA 90 bp CAGACAAATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACACGCCTTGGTCCCCGGTaGCGCAGGCGGCCGAAGAGC +
Preference number: 4 (lower is better)
Translates to: QTNAAITFIHPCLRVTTTRLGPR*RRRPKS
Trigger: GCTCTTCGGCCGCCTGCGGCACCGGGGACCAAGGCG...TGTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATTTGTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR GCA 90 bp GGTACTAGATTTACCCGTGTTGGGAAAACAGTCGTCCTGCTGATTTCGGATTTGAACCCGTTCATCTGCTaGCGCGGGTTGGCCGTGGAC +
Preference number: 4 (lower is better)
Translates to: GTRFTRVGKTVVLLISDLNPFIC*RGLAVD
Trigger: GTCCACGGCCAACCCGCGGCAGCAGATGAACGGGTT...CAAATCCGAAATCAGCAGGACGACTGTTTTCCCAACACGGGTAAATCTAGTACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR GCA 90 bp TTTGGAAAAGAGTCGTACGGTGATTTTGGGAACATGAAGCTGTTCTGCAGTGTCGTCCAGTTCCGCAGCTaGCTCTCTAGGGCCGGGGAG +
Preference number: 4 (lower is better)
Translates to: FGKESYGDFGNMKLFCSVVQFRS*LSRAGE
Trigger: CTCCCCGGCCCTAGAGAGGCAGCTGCGGAACTGGAC...GACACTGCAGAACAGCTTCATGTTCCCAAAATCACCGTACGACTCTTTTCCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR GCA 90 bp GTGTTTGGAAAAGAGTCGTACGGTGATTTTGGGAACATGAAGCTGTTCTGCAGTGTCCAGTTCCGCAGCTaGCTCTCTAGGGCCGGGGAG +
Preference number: 4 (lower is better)
Translates to: VFGKESYGDFGNMKLFCSVQFRS*LSRAGE
Trigger: CTCCCCGGCCCTAGAGAGGCAGCTGCGGAACTGGAC...ACTGCAGAACAGCTTCATGTTCCCAAAATCACCGTACGACTCTTTTCCAAACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR GCA 90 bp CCAGACAAATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACGCGGCCAGGCGGTTGTaGTCGCGCAGCCACAGCGTG +
Preference number: 4 (lower is better)
Translates to: PDKCSYNIYSSMPESNYDAARRL*SRSHSV
Trigger: CACGCTGTGGCTGCGCGAGCACAACCGCCTGGCCGC...GTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATTTGTCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR GCA 90 bp GATTTGCCTGTGTTTGGAAAAGAGTCGTACGGTGATTTTGGGAACATGAAGCTGGCGTCCGCGCTCCAGTaGGCATTGAGGGCCTTGAGC +
Preference number: 4 (lower is better)
Translates to: DLPVFGKESYGDFGNMKLASALQ*ALRALS
Trigger: GCTCAAGGCCCTCAATGCGCACTGGAGCGCGGACGC...CAGCTTCATGTTCCCAAAATCACCGTACGACTCTTTTCCAAACACAGGCAAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR GCA 90 bp AAGCAAACGCCTGAAAGTGAGCCCTTAGTTTTGGAACCGGTTTGTACAAATGGAGCGTCCGCGCTCCAGTaGGCATTGAGGGCCTTGAGC +
Preference number: 4 (lower is better)
Translates to: KQTPESEPLVLEPVCTNGASALQ*ALRALS
Trigger: GCTCAAGGCCCTCAATGCGCACTGGAGCGCGGACGC...TCCATTTGTACAAACCGGTTCCAAAACTAAGGGCTCACTTTCAGGCGTTTGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422464.5
ENST00000625793.2
CDS-3UTR GCA 90 bp GAGAGTAACTACGACATGGTACTAGATTTACCCGTGTTGGGAAAACAGTCGTCCTGCTGGCGATGGCTGTaGTCAGGTCAGCGGGGGTCT +
Preference number: 4 (lower is better)
Translates to: ESNYDMVLDLPVLGKQSSCWRWL*SGQRGS
Trigger: AGACCCCCGCTGACCTGAGCACAGCCATCGCCAGCA...GGACGACTGTTTTCCCAACACGGGTAAATCTAGTACCATGTCGTAGTTACTCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000469607.3
CDS-3UTR GCA 90 bp CTACGACATGGTACTAGATTTACCCGTGTTGGGAAAACAGTCGTCCTGCTGATTTGCTGGCGATGGCTGTaGTCAGGTCAGCGGGGGTCT +
Preference number: 4 (lower is better)
Translates to: LRHGTRFTRVGKTVVLLICWRWL*SGQRGS
Trigger: AGACCCCCGCTGACCTGAGCACAGCCATCGCCAGCA...AATCAGCAGGACGACTGTTTTCCCAACACGGGTAAATCTAGTACCATGTCGTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000469607.3
CDS-3UTR GCA 90 bp CCTGTGTTTGGAAAAGAGTCGTACGGTGATTTTGGGAACATGAAGCTGTTCTGCTGTCGGCCACGCTCCTaGTGGCGATGGCTGTGCTCA +
Preference number: 4 (lower is better)
Translates to: PVFGKESYGDFGNMKLFCCRPRS*WRWLCS
Trigger: TGAGCACAGCCATCGCCAGCAGGAGCGTGGCCGACA...GCAGAACAGCTTCATGTTCCCAAAATCACCGTACGACTCTTTTCCAAACACAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000469607.3
CDS-3UTR GCA 90 bp AAAGAGTCGTACGGTGATTTTGGGAACATGAAGCTGTTCTGCAGTGTCCTGCCAACCCGAGACAGGGAGTaGTTCTCCAGCTCACGCCTC +
Preference number: 4 (lower is better)
Translates to: KESYGDFGNMKLFCSVLPTRDRE*FSSSRL
Trigger: GAGGCGTGAGCTGGAGAAGCACTCCCTGTCTCGGGT...TGGCAGGACACTGCAGAACAGCTTCATGTTCCCAAAATCACCGTACGACTCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000469607.3
CDS-3UTR GCA 90 bp GAATCTCTGGAGGATGAGACAAGTCACTTTGCCTTGTTGGTCCTTAAGGCTCCATGGGTGCAAGTGAGCTaGTCCCGGCCTTGGAGCTCA +
Preference number: 4 (lower is better)
Translates to: ESLEDETSHFALLVLKAPWVQVS*SRPWSS
Trigger: TGAGCTCCAAGGCCGGGAGCAGCTCACTTGCACCCA...TGGAGCCTTAAGGACCAACAAGGCAAAGTGACTTGTCTCATCCTCCAGAGATTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329066.9
ENST00000422464.5
CDS-3UTR GCA 90 bp CGACATGGTACTAGATTTACCCGTGTTGGGAAAACAGTCGTCCTGCTGATTTCGCGTCGAGGTGAGACCTaGGAAGCCTCCGATCAGCAG +
Preference number: 4 (lower is better)
Translates to: RHGTRFTRVGKTVVLLISRRGET*EASDQQ
Trigger: CTGCTGATCGGAGGCTTCGCAGGTCTCACCTCGACG...CGAAATCAGCAGGACGACTGTTTTCCCAACACGGGTAAATCTAGTACCATGTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000469607.3
CDS-3UTR GCA 90 bp AAAGAGTCGTACGGTGATTTTGGGAACATGAAGCTGTTCTGCAGTGTCCTGCCACGTCGAGGTGAGACCTaGGAAGCCTCCGATCAGCAG +
Preference number: 4 (lower is better)
Translates to: KESYGDFGNMKLFCSVLPRRGET*EASDQQ
Trigger: CTGCTGATCGGAGGCTTCGCAGGTCTCACCTCGACG...TGGCAGGACACTGCAGAACAGCTTCATGTTCCCAAAATCACCGTACGACTCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000469607.3
CDS-3UTR GCA 90 bp GTGTCTGAGTTTGCTTTCAATGCCGAAGGACTCCTAACTATTGCCTTGCGTGAGAGTGTCCTGCCACTTTaGCCTCAGAGGGCTCTCGGC +
Preference number: 4 (lower is better)
Translates to: VSEFAFNAEGLLTIALRESVLPL*PQRALG
Trigger: GCCGAGAGCCCTCTGAGGGCAAAGTGGCAGGACACT...CTCACGCAAGGCAATAGTTAGGAGTCCTTCGGCATTGAAAGCAAACTCAGACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329066.9
ENST00000422464.5
CDS-3UTR GCA 90 bp CGACATGGTACTAGATTTACCCGTGTTGGGAAAACAGTCGTCCTGCTGATTTCGAGTGTCCTGCCACTTTaGCCTCAGAGGGCTCTCGGC +
Preference number: 4 (lower is better)
Translates to: RHGTRFTRVGKTVVLLISSVLPL*PQRALG
Trigger: GCCGAGAGCCCTCTGAGGGCAAAGTGGCAGGACACT...CGAAATCAGCAGGACGACTGTTTTCCCAACACGGGTAAATCTAGTACCATGTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000469607.3
CDS-3UTR GCA 90 bp CCTGTGCTTCCAGCCGATCCTCAGATTAAGTGGAAGCAAACGCCTGAAAGTGAGTGTTCTGCAGTGTCCTaGCACTTTGCCCTCAGAGGG +
Preference number: 4 (lower is better)
Translates to: PVLPADPQIKWKQTPESECSAVS*HFALRG
Trigger: CCCTCTGAGGGCAAAGTGGCAGGACACTGCAGAACA...CTCACTTTCAGGCGTTTGCTTCCACTTAATCTGAGGATCGGCTGGAAGCACAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422464.5
CDS-3UTR GCA 90 bp AGTAACTACGACATGGTACTAGATTTACCCGTGTTGGGAAAACAGTCGTCCTGCGTGTGGAAAAACCAGTaGTGGAGGGACCGCCGGGGC +
Preference number: 4 (lower is better)
Translates to: SNYDMVLDLPVLGKQSSCVWKNQ*WRDRRG
Trigger: GCCCCGGCGGTCCCTCCAGCACTGGTTTTTCCACAC...GCAGGACGACTGTTTTCCCAACACGGGTAAATCTAGTACCATGTCGTAGTTACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000329066.9
ENST00000422464.5
CDS-3UTR GCA 90 bp GTGTTTGGAAAAGAGTCGTACGGTGATTTTGGGAACATGAAGCTGTTCTGCAGTTCCTCCCACCGGCCCTaGAGGAAGCCAGGAGTGCTC +
Preference number: 4 (lower is better)
Translates to: VFGKESYGDFGNMKLFCSSSHRP*RKPGVL
Trigger: GAGCACTCCTGGCTTCCTGCAGGGCCGGTGGGAGGA...ACTGCAGAACAGCTTCATGTTCCCAAAATCACCGTACGACTCTTTTCCAAACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329066.9
ENST00000422464.5
CDS-3UTR GCA 90 bp CAAACCAAAGAAAGGTTCAGGCTCTACTGCAGGACCCAGGGGCAGGCTTTGCAGGATCACAGCTCCCAGTaGCAATGTCATTGTGTGGTC +
Preference number: 4 (lower is better)
Translates to: QTKERFRLYCRTQGQALQDHSSQ*QCHCVV
Trigger: GACCACACAATGACATTGGCACTGGGAGCTGTGATC...CTGCAAAGCCTGCCCCTGGGTCCTGCAGTAGAGCCTGAACCTTTCTTTGGTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382269.7
ENST00000539820.5
ENST00000617910.3
ENST00000629774.2
CDS-3UTR GCA 90 bp CCTCTCCTGTGCTTCCAGCCGATCCTCAGATTAAGTGGAAGCAAACGCCTGAAACTCCTTCCTCTCCTGTaGTTCCAGCCGATCCTCAGA +
Preference number: 4 (lower is better)
Translates to: PLLCFQPILRLSGSKRLKLLPLL*FQPILR
Trigger: TCTGAGGATCGGCTGGAAGCACAGGAGAGGAAGGAG...TTTCAGGCGTTTGCTTCCACTTAATCTGAGGATCGGCTGGAAGCACAGGAGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422464.5
ENST00000625793.2
CDS-3UTR GCA 90 bp CCTGGACAGGAGCTCTTTTCACAAAGGACCGCTGGCGAGATGAGCCATCCTTCTTGGAGGCCACTGTTCTaGTCTCTGCTTCTCTCAGTT +
Preference number: 4 (lower is better)
Translates to: PGQELFSQRTAGEMSHPSWRPLF*SLLLSV
Trigger: AACTGAGAGAAGCAGAGAGCAGAACAGTGGCCTCCA...AGAAGGATGGCTCATCTCGCCAGCGGTCCTTTGTGAAAAGAGCTCCTGTCCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422464.5
CDS-3UTR GCA 90 bp CTCCTTCCTCTCCTGTGCTTCCAGCCGATCCTCAGATTAAGTGGAAGCAAACGCCAGGAGGGTCGAAGCTaGAGTGAGCTATGTTTGTGC +
Preference number: 4 (lower is better)
Translates to: LLPLLCFQPILRLSGSKRQEGRS*SELCLC
Trigger: GCACAAACATAGCTCACTGCAGCTTCGACCCTCCTG...GCGTTTGCTTCCACTTAATCTGAGGATCGGCTGGAAGCACAGGAGAGGAAGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422464.5
CDS-3UTR CCA 90 bp TCATCCATGCCTGAGAGTAACTACGACATGGTACTAGATTTACCCGTGTTGGGAGCATCGTGGCGTACATaGCGGTGTCCACCAGGCGCT +
Preference number: 4 (lower is better)
Translates to: SSMPESNYDMVLDLPVLGASWRT*RCPPGA
Trigger: AGCGCCTGGTGGACACCGCCATGTACGCCACGATGC...TCCCAACACGGGTAAATCTAGTACCATGTCGTAGTTACTCTCAGGCATGGATGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
CDS-3UTR CCA 90 bp AAAGCCCCAGAAGGAACAAATCAGGCAATGTTTACAAGAAAAGGCCAGACAAATCCAAAGAGCGCGCCTTaGTCCCCGGTGCCGCAGGCG +
Preference number: 4 (lower is better)
Translates to: KAPEGTNQAMFTRKGQTNPKSAP*SPVPQA
Trigger: CGCCTGCGGCACCGGGGACCAAGGCGCGCTCTTTGG...ATTTGTCTGGCCTTTTCTTGTAAACATTGCCTGATTTGTTCCTTCTGGGGCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR CCA 90 bp TCATCCATGCCTGAGAGTAACTACGACATGGTACTAGATTTACCCGTGTTGGGATCTGCTGCCGCGGGTTaGCCGTGGACAGGTTCCCAA +
Preference number: 4 (lower is better)
Translates to: SSMPESNYDMVLDLPVLGSAAAG*PWTGSQ
Trigger: TTGGGAACCTGTCCACGGCCAACCCGCGGCAGCAGA...TCCCAACACGGGTAAATCTAGTACCATGTCGTAGTTACTCTCAGGCATGGATGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR CCA 90 bp ACGCCTGAAAGTGAGCCCTTAGTTTTGGAACCGGTTTGTACAAATGGAAGGCATTCTGCTGCCGCGGGTTaGCCGTGGACAGGTTCCCAA +
Preference number: 4 (lower is better)
Translates to: TPESEPLVLEPVCTNGRHSAAAG*PWTGSQ
Trigger: TTGGGAACCTGTCCACGGCCAACCCGCGGCAGCAGA...ATGCCTTCCATTTGTACAAACCGGTTCCAAAACTAAGGGCTCACTTTCAGGCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422464.5
ENST00000625793.2
CDS-3UTR CCA 90 bp AAAGAGTCGTACGGTGATTTTGGGAACATGAAGCTGTTCTGCAGTGTCCTGCCAAGCTGCCATACACGGTaGACGCGTCCAGGAACGAGG +
Preference number: 4 (lower is better)
Translates to: KESYGDFGNMKLFCSVLPSCHTR*TRPGTR
Trigger: CCTCGTTCCTGGACGCGTCCACCGTGTATGGCAGCT...TGGCAGGACACTGCAGAACAGCTTCATGTTCCCAAAATCACCGTACGACTCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR CCA 90 bp AATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACATGGTACGGCCGCAGGCGCGCGTaGCGGCACGAAGGGCAGGTA +
Preference number: 4 (lower is better)
Translates to: NAAITFIHPCLRVTTTWYGRRRA*RHEGQV
Trigger: TACCTGCCCTTCGTGCCGCCACGCGCGCCTGCGGCC...GTACCATGTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR CCA 90 bp CGACATGGTACTAGATTTACCCGTGTTGGGAAAACAGTCGTCCTGCTGATTTCGCTCAGGGTGATGATCTaGTGCAGAGCGCCCACGACC +
Preference number: 4 (lower is better)
Translates to: RHGTRFTRVGKTVVLLISLRVMI*CRAPTT
Trigger: GGTCGTGGGCGCTCTGCACCAGATCATCACCCTGAG...CGAAATCAGCAGGACGACTGTTTTCCCAACACGGGTAAATCTAGTACCATGTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR CCA 90 bp GTGTCTGAGTTTGCTTTCAATGCCGAAGGACTCCTAACTATTGCCTTGCGTGAGCTCAGGGTGATGATCTaGTGCAGAGCGCCCACGACC +
Preference number: 4 (lower is better)
Translates to: VSEFAFNAEGLLTIALRELRVMI*CRAPTT
Trigger: GGTCGTGGGCGCTCTGCACCAGATCATCACCCTGAG...CTCACGCAAGGCAATAGTTAGGAGTCCTTCGGCATTGAAAGCAAACTCAGACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329066.9
ENST00000422464.5
CDS-3UTR CCA 90 bp GTGTTTGGAAAAGAGTCGTACGGTGATTTTGGGAACATGAAGCTGTTCTGCAGTGGACCCACGTACTGCTaGAAGGCCTCGGGTCCCAGG +
Preference number: 4 (lower is better)
Translates to: VFGKESYGDFGNMKLFCSGPTYC*KASGPR
Trigger: CCTGGGACCCGAGGCCTTCCAGCAGTACGTGGGTCC...ACTGCAGAACAGCTTCATGTTCCCAAAATCACCGTACGACTCTTTTCCAAACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR CCA 90 bp TTTGGAAAAGAGTCGTACGGTGATTTTGGGAACATGAAGCTGTTCTGCAGTGTCGGGTGGATCGTGGCATaGCCGAAGCGGAAGGCGGCT +
Preference number: 4 (lower is better)
Translates to: FGKESYGDFGNMKLFCSVGWIVA*PKRKAA
Trigger: AGCCGCCTTCCGCTTCGGCCATGCCACGATCCACCC...GACACTGCAGAACAGCTTCATGTTCCCAAAATCACCGTACGACTCTTTTCCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000469607.3
CDS-3UTR CCA 90 bp TTGCCTGTGTTTGGAAAAGAGTCGTACGGTGATTTTGGGAACATGAAGCTGTTCGGGTGGATCGTGGCATaGCCGAAGCGGAAGGCGGCT +
Preference number: 4 (lower is better)
Translates to: LPVFGKESYGDFGNMKLFGWIVA*PKRKAA
Trigger: AGCCGCCTTCCGCTTCGGCCATGCCACGATCCACCC...GAACAGCTTCATGTTCCCAAAATCACCGTACGACTCTTTTCCAAACACAGGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000469607.3
CDS-3UTR CCA 90 bp GTGTTTGGAAAAGAGTCGTACGGTGATTTTGGGAACATGAAGCTGTTCTGCAGTCCAGCGGGTGGATCGTaGCATGGCCGAAGCGGAAGG +
Preference number: 4 (lower is better)
Translates to: VFGKESYGDFGNMKLFCSPAGGS*HGRSGR
Trigger: CCTTCCGCTTCGGCCATGCCACGATCCACCCGCTGG...ACTGCAGAACAGCTTCATGTTCCCAAAATCACCGTACGACTCTTTTCCAAACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000469607.3
CDS-3UTR CCA 90 bp TTGGTGAATCTCTGGAGGATGAGACAAGTCACTTTGCCTTGTTGGTCCTTAAGGCTCCTCACCAGCGGGTaGATCGTGGCATGGCCGAAG +
Preference number: 4 (lower is better)
Translates to: LVNLWRMRQVTLPCWSLRLLTSG*IVAWPK
Trigger: CTTCGGCCATGCCACGATCCACCCGCTGGTGAGGAG...CCTTAAGGACCAACAAGGCAAAGTGACTTGTCTCATCCTCCAGAGATTCACCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329066.9
ENST00000422464.5
CDS-3UTR CCA 90 bp CCTGAGAGTAACTACGACATGGTACTAGATTTACCCGTGTTGGGAAAACAGTCGCTCCTCACCAGCGGGTaGATCGTGGCATGGCCGAAG +
Preference number: 4 (lower is better)
Translates to: PESNYDMVLDLPVLGKQSLLTSG*IVAWPK
Trigger: CTTCGGCCATGCCACGATCCACCCGCTGGTGAGGAG...CGACTGTTTTCCCAACACGGGTAAATCTAGTACCATGTCGTAGTTACTCTCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000469607.3
CDS-3UTR CCA 90 bp GAGAGTAACTACGACATGGTACTAGATTTACCCGTGTTGGGAAAACAGTCGTCCCTCCTCACCAGCGGGTaGATCGTGGCATGGCCGAAG +
Preference number: 4 (lower is better)
Translates to: ESNYDMVLDLPVLGKQSSLLTSG*IVAWPK
Trigger: CTTCGGCCATGCCACGATCCACCCGCTGGTGAGGAG...GGACGACTGTTTTCCCAACACGGGTAAATCTAGTACCATGTCGTAGTTACTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000469607.3
CDS-3UTR CCA 90 bp GGTACTAGATTTACCCGTGTTGGGAAAACAGTCGTCCTGCTGATTTCGGATTTGGGTGCTCCTGGAAGCTaGCGTCCAGCCTCCTCACCA +
Preference number: 4 (lower is better)
Translates to: GTRFTRVGKTVVLLISDLGAPGS*RPASSP
Trigger: TGGTGAGGAGGCTGGACGCCAGCTTCCAGGAGCACC...CAAATCCGAAATCAGCAGGACGACTGTTTTCCCAACACGGGTAAATCTAGTACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000469607.3
CDS-3UTR CCA 90 bp AGTAACTACGACATGGTACTAGATTTACCCGTGTTGGGAAAACAGTCGTCCTGCGGTGCTCCTGGAAGCTaGCGTCCAGCCTCCTCACCA +
Preference number: 4 (lower is better)
Translates to: SNYDMVLDLPVLGKQSSCGAPGS*RPASSP
Trigger: TGGTGAGGAGGCTGGACGCCAGCTTCCAGGAGCACC...GCAGGACGACTGTTTTCCCAACACGGGTAAATCTAGTACCATGTCGTAGTTACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000469607.3
CDS-3UTR CCA 90 bp GTGTTTGGAAAAGAGTCGTACGGTGATTTTGGGAACATGAAGCTGTTCTGCAGTAGGTCGGGGTGCTCCTaGAAGCTGGCGTCCAGCCTC +
Preference number: 4 (lower is better)
Translates to: VFGKESYGDFGNMKLFCSRSGCS*KLASSL
Trigger: GAGGCTGGACGCCAGCTTCCAGGAGCACCCCGACCT...ACTGCAGAACAGCTTCATGTTCCCAAAATCACCGTACGACTCTTTTCCAAACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000469607.3
CDS-3UTR CCA 90 bp CTGTGCTTCCAGCCGATCCTCAGATTAAGTGGAAGCAAACGCCTGAAAGTGAGCCCTGCACCTGCAGTTTaGCTGGTCTTGCAAGAAGGC +
Preference number: 4 (lower is better)
Translates to: LCFQPILRLSGSKRLKVSPAPAV*LVLQEG
Trigger: GCCTTCTTGCAAGACCAGCCAAACTGCAGGTGCAGG...GCTCACTTTCAGGCGTTTGCTTCCACTTAATCTGAGGATCGGCTGGAAGCACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422464.5
ENST00000625793.2
CDS-3UTR CCA 90 bp GGTACTAGATTTACCCGTGTTGGGAAAACAGTCGTCCTGCTGATTTCGGATTTGCCACTCATTGTAACCTaGCAGCCCGTGGTCCCGGCC +
Preference number: 4 (lower is better)
Translates to: GTRFTRVGKTVVLLISDLPLIVT*QPVVPA
Trigger: GGCCGGGACCACGGGCTGCCAGGTTACAATGAGTGG...CAAATCCGAAATCAGCAGGACGACTGTTTTCCCAACACGGGTAAATCTAGTACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000422464.5
CDS-3UTR CCA 90 bp TTGCCTGTGTTTGGAAAAGAGTCGTACGGTGATTTTGGGAACATGAAGCTGTTCCGCTCCTGCTGGCGATaGCTGTGCTCAGGTCAGCGG +
Preference number: 4 (lower is better)
Translates to: LPVFGKESYGDFGNMKLFRSCWR*LCSGQR
Trigger: CCGCTGACCTGAGCACAGCCATCGCCAGCAGGAGCG...GAACAGCTTCATGTTCCCAAAATCACCGTACGACTCTTTTCCAAACACAGGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000469607.3
CDS-3UTR CCA 90 bp CCTGTGCTTCCAGCCGATCCTCAGATTAAGTGGAAGCAAACGCCTGAAAGTGAGGGGAATTTGCCGACTTaGAAGGCATCCATGGGCACC +
Preference number: 4 (lower is better)
Translates to: PVLPADPQIKWKQTPESEGNLPT*KASMGT
Trigger: GGTGCCCATGGATGCCTTCCAAGTCGGCAAATTCCC...CTCACTTTCAGGCGTTTGCTTCCACTTAATCTGAGGATCGGCTGGAAGCACAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422464.5
ENST00000625793.2
CDS-3UTR CCA 90 bp TTGCCTGTGTTTGGAAAAGAGTCGTACGGTGATTTTGGGAACATGAAGCTGTTCAGCTGCTCCCGGCCTTaGAGCTCATACCCGTGCCGG +
Preference number: 4 (lower is better)
Translates to: LPVFGKESYGDFGNMKLFSCSRP*SSYPCR
Trigger: CCGGCACGGGTATGAGCTCCAAGGCCGGGAGCAGCT...GAACAGCTTCATGTTCCCAAAATCACCGTACGACTCTTTTCCAAACACAGGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000469607.3
CDS-3UTR CCA 90 bp TTTGGAAAAGAGTCGTACGGTGATTTTGGGAACATGAAGCTGTTCTGCAGTGTCAGCTGCTCCCGGCCTTaGAGCTCATACCCGTGCCGG +
Preference number: 4 (lower is better)
Translates to: FGKESYGDFGNMKLFCSVSCSRP*SSYPCR
Trigger: CCGGCACGGGTATGAGCTCCAAGGCCGGGAGCAGCT...GACACTGCAGAACAGCTTCATGTTCCCAAAATCACCGTACGACTCTTTTCCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000469607.3
CDS-3UTR CCA 90 bp CTCCTTCCTCTCCTGTGCTTCCAGCCGATCCTCAGATTAAGTGGAAGCAAACGCAAATCCCATCCTTCCTaGGTGCAAGTGAGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: LLPLLCFQPILRLSGSKRKSHPS*VQVSCS
Trigger: GGAGCAGCTCACTTGCACCCAGGAAGGATGGGATTT...GCGTTTGCTTCCACTTAATCTGAGGATCGGCTGGAAGCACAGGAGAGGAAGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422464.5
ENST00000625793.2
CDS-3UTR CCA 90 bp CGACATGGTACTAGATTTACCCGTGTTGGGAAAACAGTCGTCCTGCTGATTTCGGAGGTCCCTACGGCCTaGTGCTTTCCGCATCTCAGC +
Preference number: 4 (lower is better)
Translates to: RHGTRFTRVGKTVVLLISEVPTA*CFPHLS
Trigger: GCTGAGATGCGGAAAGCACCAGGCCGTAGGGACCTC...CGAAATCAGCAGGACGACTGTTTTCCCAACACGGGTAAATCTAGTACCATGTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000469607.3
CDS-3UTR CCA 90 bp GAGGCTCATGTGTTGGTGAATCTCTGGAGGATGAGACAAGTCACTTTGCCTTGTGTCCAACCACTGCGGTaGCAGCTGGAAACATGCGGC +
Preference number: 4 (lower is better)
Translates to: EAHVLVNLWRMRQVTLPCVQPLR*QLETCG
Trigger: GCCGCATGTTTCCAGCTGCCACCGCAGTGGTTGGAC...ACAAGGCAAAGTGACTTGTCTCATCCTCCAGAGATTCACCAACACATGAGCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422464.5
3UTR CAA 72 bp AATTCACAAAGAGCCTCACTTCCAGGCCAGGTCCTTTaGGTTCCATGCGTGGGAGCCAGGTGCAAAGACGAA +
Preference number: 4 (lower is better)
Translates to: NSQRASLPGQVL*VPCVGARCKDE
Trigger: TTCGTCTTTGCACCTGGCTCCCACGCATGGAACCAAAAGGACCTGGCCTGGAAGTGAGGCTCTTTGTGAATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422464.5
CDS-3UTR TCA 90 bp CAAACCAAAGAAAGGTTCAGGCTCTACTGCAGGACCCAGGGGCAGGCTTTGCAGAGCCAACTGCACTGCTaGGTAATTTTCACGGCTGTA +
Preference number: 4 (lower is better)
Translates to: QTKERFRLYCRTQGQALQSQLHC*VIFTAV
Trigger: TACAGCCGTGAAAATTACTCAGCAGTGCAGTTGGCT...CTGCAAAGCCTGCCCCTGGGTCCTGCAGTAGAGCCTGAACCTTTCTTTGGTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382269.7
ENST00000539820.5
ENST00000617910.3
ENST00000629774.2
CDS-3UTR TCA 90 bp CAGGACCCAGGGGCAGGCTTTGCAGGTGGATGTAGACGTCATTGGAGAAAAGCTGGATTCCTCTTTTCTTaGGGTTTCTCTGCATCGTGG +
Preference number: 4 (lower is better)
Translates to: QDPGAGFAGGCRRHWRKAGFLFS*GFSASW
Trigger: CCACGATGCAGAGAAACCTCAAGAAAAGAGGAATCC...AGCTTTTCTCCAATGACGTCTACATCCACCTGCAAAGCCTGCCCCTGGGTCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000382269.7
ENST00000539820.5
ENST00000617910.3
ENST00000629774.2
CDS-3UTR TCA 90 bp TCATCCATGCCTGAGAGTAACTACGACATGGTACTAGATTTACCCGTGTTGGGAAGCCTCGGGGCTGACTaGAGCCGTCCTCATAGACTG +
Preference number: 4 (lower is better)
Translates to: SSMPESNYDMVLDLPVLGSLGAD*SRPHRL
Trigger: CAGTCTATGAGGACGGCTTCAGTCAGCCCCGAGGCT...TCCCAACACGGGTAAATCTAGTACCATGTCGTAGTTACTCTCAGGCATGGATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR TCA 90 bp AGTAACTACGACATGGTACTAGATTTACCCGTGTTGGGAAAACAGTCGTCCTGCAGCCTCGGGGCTGACTaGAGCCGTCCTCATAGACTG +
Preference number: 4 (lower is better)
Translates to: SNYDMVLDLPVLGKQSSCSLGAD*SRPHRL
Trigger: CAGTCTATGAGGACGGCTTCAGTCAGCCCCGAGGCT...GCAGGACGACTGTTTTCCCAACACGGGTAAATCTAGTACCATGTCGTAGTTACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR TCA 90 bp AAGCAAACGCCTGAAAGTGAGCCCTTAGTTTTGGAACCGGTTTGTACAAATGGAGGCCCCTCTGCAGGTTaGTGGACGCCAGATCCAAGG +
Preference number: 4 (lower is better)
Translates to: KQTPESEPLVLEPVCTNGGPSAG*WTPDPR
Trigger: CCTTGGATCTGGCGTCCATCAACCTGCAGAGGGGCC...TCCATTTGTACAAACCGGTTCCAAAACTAAGGGCTCACTTTCAGGCGTTTGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422464.5
ENST00000625793.2
CDS-3UTR TCA 90 bp CCTGTGTTTGGAAAAGAGTCGTACGGTGATTTTGGGAACATGAAGCTGTTCTGCGCCTCTGTGCATCCGTaGAGACGTGGCTGTTCTCCC +
Preference number: 4 (lower is better)
Translates to: PVFGKESYGDFGNMKLFCASVHP*RRGCSP
Trigger: GGGAGAACAGCCACGTCTTCACGGATGCACAGAGGC...GCAGAACAGCTTCATGTTCCCAAAATCACCGTACGACTCTTTTCCAAACACAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000469607.3
CDS-3UTR TCA 90 bp ACTAGATTTACCCGTGTTGGGAAAACAGTCGTCCTGCTGATTTCGGATTTGCCTGCCTCTGTGCATCCGTaGAGACGTGGCTGTTCTCCC +
Preference number: 4 (lower is better)
Translates to: TRFTRVGKTVVLLISDLPASVHP*RRGCSP
Trigger: GGGAGAACAGCCACGTCTTCACGGATGCACAGAGGC...AGGCAAATCCGAAATCAGCAGGACGACTGTTTTCCCAACACGGGTAAATCTAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000469607.3
CDS-3UTR TCA 90 bp GGTACTAGATTTACCCGTGTTGGGAAAACAGTCGTCCTGCTGATTTCGGATTTGGCCTCTGTGCATCCGTaGAGACGTGGCTGTTCTCCC +
Preference number: 4 (lower is better)
Translates to: GTRFTRVGKTVVLLISDLASVHP*RRGCSP
Trigger: GGGAGAACAGCCACGTCTTCACGGATGCACAGAGGC...CAAATCCGAAATCAGCAGGACGACTGTTTTCCCAACACGGGTAAATCTAGTACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000469607.3
CDS-3UTR TCA 90 bp CTACGACATGGTACTAGATTTACCCGTGTTGGGAAAACAGTCGTCCTGCTGATTCCATGGGCACCCTGGTaGGGCCAGTGTTGTCACAGA +
Preference number: 4 (lower is better)
Translates to: LRHGTRFTRVGKTVVLLIPWAPW*GQCCHR
Trigger: TCTGTGACAACACTGGCCTCACCAGGGTGCCCATGG...AATCAGCAGGACGACTGTTTTCCCAACACGGGTAAATCTAGTACCATGTCGTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000469607.3
CDS-3UTR TCA 90 bp CCTTCCTCTCCTGTGCTTCCAGCCGATCCTCAGATTAAGTGGAAGCAAACGCCTCCAGGTTCATGCCAGTaGTGCTGTCACAAGACTCAA +
Preference number: 4 (lower is better)
Translates to: PSSPVLPADPQIKWKQTPPGSCQ*CCHKTQ
Trigger: TTGAGTCTTGTGACAGCATCACTGGCATGAACCTGG...AGGCGTTTGCTTCCACTTAATCTGAGGATCGGCTGGAAGCACAGGAGAGGAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422464.5
ENST00000625793.2
CDS-3UTR TCA 90 bp AAGCAAACGCCTGAAAGTGAGCCCTTAGTTTTGGAACCGGTTTGTACAAATGGACTTCCTGGGTGCAAGTaGGCTGCTCCCGGCCTTGGA +
Preference number: 4 (lower is better)
Translates to: KQTPESEPLVLEPVCTNGLPGCK*AAPGLG
Trigger: TCCAAGGCCGGGAGCAGCTCACTTGCACCCAGGAAG...TCCATTTGTACAAACCGGTTCCAAAACTAAGGGCTCACTTTCAGGCGTTTGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422464.5
ENST00000625793.2
CDS-3UTR TCA 90 bp GTGTCTGAGTTTGCTTTCAATGCCGAAGGACTCCTAACTATTGCCTTGCGTGAGAAATCACCGTCGAGGTaGGACCTGCGAAGCCTCCGA +
Preference number: 4 (lower is better)
Translates to: VSEFAFNAEGLLTIALREKSPSR*DLRSLR
Trigger: TCGGAGGCTTCGCAGGTCTCACCTCGACGGTGATTT...CTCACGCAAGGCAATAGTTAGGAGTCCTTCGGCATTGAAAGCAAACTCAGACAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329066.9
ENST00000422464.5
CDS-3UTR TCA 90 bp CGACATGGTACTAGATTTACCCGTGTTGGGAAAACAGTCGTCCTGCTGATTTCGAAATCACCGTCGAGGTaGGACCTGCGAAGCCTCCGA +
Preference number: 4 (lower is better)
Translates to: RHGTRFTRVGKTVVLLISKSPSR*DLRSLR
Trigger: TCGGAGGCTTCGCAGGTCTCACCTCGACGGTGATTT...CGAAATCAGCAGGACGACTGTTTTCCCAACACGGGTAAATCTAGTACCATGTCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000469607.3
CDS-3UTR TCA 90 bp AATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACATGGTACTCCTGCTCCGAGTCCTaGGCTGCGGCCCGCTGCGGT +
Preference number: 4 (lower is better)
Translates to: NAAITFIHPCLRVTTTWYSCSES*AAARCG
Trigger: ACCGCAGCGGGCCGCAGCTCAGGACTCGGAGCAGGA...GTACCATGTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
CDS-3UTR TCA 90 bp AAAGCTTTGACTGGCTTCAGTTTCGCATTATTTGGTCTGTCCTGCTGGAAGGTTCTCACTGCTGCCGGCTaGGGCCCTGGTCTTGAGGTT +
Preference number: 4 (lower is better)
Translates to: KALTGFSFALFGLSCWKVLTAAG*GPGLEV
Trigger: AACCTCAAGACCAGGGCCTCAGCCGGCAGCAGTGAG...AACCTTCCAGCAGGACAGACCAAATAATGCGAAACTGAAGCCAGTCAAAGCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382269.7
ENST00000539820.5
ENST00000617910.3
ENST00000629774.2
CDS-3UTR TCA 90 bp AAGTTTCTGGCTTCCGGACAAATGCTTGTTTGCAGGAGGCCACAGAGGATCCACAACATGCGATCATTATaGGGAAGCGTGCGCCCCATG +
Preference number: 4 (lower is better)
Translates to: KFLASGQMLVCRRPQRIHNMRSL*GSVRPM
Trigger: CATGGGGCGCACGCTTCCTCATAATGATCGCATGTT...GTGGATCCTCTGTGGCCTCCTGCAAACAAGCATTTGTCCGGAAGCCAGAAACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422464.5
CDS-3UTR TCA 90 bp ACGCCTGAAAGTGAGCCCTTAGTTTTGGAACCGGTTTGTACAAATGGAAGGCATCCCTGCGACCACAGATaGACAGAACGCCTGGCCTTG +
Preference number: 4 (lower is better)
Translates to: TPESEPLVLEPVCTNGRHPCDHR*TERLAL
Trigger: CAAGGCCAGGCGTTCTGTTCATCTGTGGTCGCAGGG...ATGCCTTCCATTTGTACAAACCGGTTCCAAAACTAAGGGCTCACTTTCAGGCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422464.5
CDS-3UTR GCA 90 bp CCAGTGCCAATGTCATTGTGTGGTCAGCAGAGATTCTCCCAGGAGCGTCAGTGGTGTTTCCATTATCTCTaGTGCTCGGGCAATCACTCC +
Preference number: 4 (lower is better)
Translates to: PVPMSLCGQQRFSQERQWCFHYL*CSGNHS
Trigger: GGAGTGATTGCCCGAGCAGCAGAGATAATGGAAACA...CCACTGACGCTCCTGGGAGAATCTCTGCTGACCACACAATGACATTGGCACTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382269.7
ENST00000539820.5
ENST00000617910.3
ENST00000629774.2
CDS-3UTR GCA 90 bp TTGCCTGTGTTTGGAAAAGAGTCGTACGGTGATTTTGGGAACATGAAGCTGTTCGTCAACCCGTTCATCTaGTGCCGCGGGTTGGCCGTG +
Preference number: 4 (lower is better)
Translates to: LPVFGKESYGDFGNMKLFVNPFI*CRGLAV
Trigger: CACGGCCAACCCGCGGCAGCAGATGAACGGGTTGAC...GAACAGCTTCATGTTCCCAAAATCACCGTACGACTCTTTTCCAAACACAGGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR GCA 90 bp TTTGGAAAAGAGTCGTACGGTGATTTTGGGAACATGAAGCTGTTCTGCAGTGTCGTCAACCCGTTCATCTaGTGCCGCGGGTTGGCCGTG +
Preference number: 4 (lower is better)
Translates to: FGKESYGDFGNMKLFCSVVNPFI*CRGLAV
Trigger: CACGGCCAACCCGCGGCAGCAGATGAACGGGTTGAC...GACACTGCAGAACAGCTTCATGTTCCCAAAATCACCGTACGACTCTTTTCCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR GCA 90 bp AAGCAAACGCCTGAAAGTGAGCCCTTAGTTTTGGAACCGGTTTGTACAAATGGAGTCAACCCGTTCATCTaGTGCCGCGGGTTGGCCGTG +
Preference number: 4 (lower is better)
Translates to: KQTPESEPLVLEPVCTNGVNPFI*CRGLAV
Trigger: CACGGCCAACCCGCGGCAGCAGATGAACGGGTTGAC...TCCATTTGTACAAACCGGTTCCAAAACTAAGGGCTCACTTTCAGGCGTTTGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422464.5
ENST00000625793.2
CDS-3UTR GCA 90 bp GGCCAGACAAATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGGTCCAGTTCCGCAGCTaGCTCTCTAGGGCCGGGGAG +
Preference number: 4 (lower is better)
Translates to: GQTNAAITFIHPCLRVTTVQFRS*LSRAGE
Trigger: CTCCCCGGCCCTAGAGAGGCAGCTGCGGAACTGGAC...CGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATTTGTCTGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR GCA 90 bp CCAGACAAATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACCGCAGCCACAGCGTGTaGAGTGCCGTCAGGGAGGGG +
Preference number: 4 (lower is better)
Translates to: PDKCSYNIYSSMPESNYDRSHSV*SAVREG
Trigger: CCCCTCCCTGACGGCACTGCACACGCTGTGGCTGCG...GTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATTTGTCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR GCA 90 bp AGGCCAGACAAATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACCGCAGCCACAGCGTGTaGAGTGCCGTCAGGGAGGGG +
Preference number: 4 (lower is better)
Translates to: RPDKCSYNIYSSMPESNYRSHSV*SAVREG
Trigger: CCCCTCCCTGACGGCACTGCACACGCTGTGGCTGCG...GTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATTTGTCTGGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR GCA 90 bp GACAAATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACATGCCGGGCAGGTCGGGGTaGTCCTGGAAGCTGGCGTCC +
Preference number: 4 (lower is better)
Translates to: DKCSYNIYSSMPESNYDMPGRSG*SWKLAS
Trigger: GGACGCCAGCTTCCAGGAGCACCCCGACCTGCCCGG...CATGTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATTTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000446278.5
CDS-3UTR GCA 90 bp AATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACATGGTACCCGGGCAGGTCGGGGTaGTCCTGGAAGCTGGCGTCC +
Preference number: 4 (lower is better)
Translates to: NAAITFIHPCLRVTTTWYPGRSG*SWKLAS
Trigger: GGACGCCAGCTTCCAGGAGCACCCCGACCTGCCCGG...GTACCATGTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000446278.5
CDS-3UTR GCA 90 bp GATTTGCCTGTGTTTGGAAAAGAGTCGTACGGTGATTTTGGGAACATGAAGCTGTGTCGGCCACGCTCCTaGTGGCGATGGCTGTGCTCA +
Preference number: 4 (lower is better)
Translates to: DLPVFGKESYGDFGNMKLCRPRS*WRWLCS
Trigger: TGAGCACAGCCATCGCCAGCAGGAGCGTGGCCGACA...CAGCTTCATGTTCCCAAAATCACCGTACGACTCTTTTCCAAACACAGGCAAATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000469607.3
CDS-3UTR GCA 90 bp AAAGAGTCGTACGGTGATTTTGGGAACATGAAGCTGTTCTGCAGTGTCCTGCCACAGCTCACGCCTCTGTaGATCCGTGAAGACGTGGCT +
Preference number: 4 (lower is better)
Translates to: KESYGDFGNMKLFCSVLPQLTPL*IREDVA
Trigger: AGCCACGTCTTCACGGATGCACAGAGGCGTGAGCTG...TGGCAGGACACTGCAGAACAGCTTCATGTTCCCAAAATCACCGTACGACTCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000469607.3
CDS-3UTR GCA 90 bp CCTGTGTTTGGAAAAGAGTCGTACGGTGATTTTGGGAACATGAAGCTGTTCTGCACCCGAGACAGGGAGTaGTTCTCCAGCTCACGCCTC +
Preference number: 4 (lower is better)
Translates to: PVFGKESYGDFGNMKLFCTRDRE*FSSSRL
Trigger: GAGGCGTGAGCTGGAGAAGCACTCCCTGTCTCGGGT...GCAGAACAGCTTCATGTTCCCAAAATCACCGTACGACTCTTTTCCAAACACAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000469607.3
CDS-3UTR GCA 90 bp TGCTTCCAGCCGATCCTCAGATTAAGTGGAAGCAAACGCCTGAAAGTGAGCCCTCCAGACTCCTCACAGTaGACAAAGTCCCCATTCTCC +
Preference number: 4 (lower is better)
Translates to: CFQPILRLSGSKRLKVSPPDSSQ*TKSPFS
Trigger: GGAGAATGGGGACTTTGTGCACTGTGAGGAGTCTGG...AGGGCTCACTTTCAGGCGTTTGCTTCCACTTAATCTGAGGATCGGCTGGAAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422464.5
ENST00000625793.2
CDS-3UTR GCA 90 bp ACTAGATTTACCCGTGTTGGGAAAACAGTCGTCCTGCTGATTTCGGATTTGCCTTGGGTGCAAGTGAGCTaGTCCCGGCCTTGGAGCTCA +
Preference number: 4 (lower is better)
Translates to: TRFTRVGKTVVLLISDLPWVQVS*SRPWSS
Trigger: TGAGCTCCAAGGCCGGGAGCAGCTCACTTGCACCCA...AGGCAAATCCGAAATCAGCAGGACGACTGTTTTCCCAACACGGGTAAATCTAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000469607.3
CDS-3UTR GCA 90 bp ACGCCTGAAAGTGAGCCCTTAGTTTTGGAACCGGTTTGTACAAATGGAAGGCATTGGGTGCAAGTGAGCTaGTCCCGGCCTTGGAGCTCA +
Preference number: 4 (lower is better)
Translates to: TPESEPLVLEPVCTNGRHWVQVS*SRPWSS
Trigger: TGAGCTCCAAGGCCGGGAGCAGCTCACTTGCACCCA...ATGCCTTCCATTTGTACAAACCGGTTCCAAAACTAAGGGCTCACTTTCAGGCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422464.5
ENST00000625793.2
CDS-3UTR GCA 90 bp CCTGAGAGTAACTACGACATGGTACTAGATTTACCCGTGTTGGGAAAACAGTCGCGCCTTTGGTGTTTCTaGACCTCGCAGAGGCGTGGC +
Preference number: 4 (lower is better)
Translates to: PESNYDMVLDLPVLGKQSRLWCF*TSQRRG
Trigger: GCCACGCCTCTGCGAGGTGCAGAAACACCAAAGGCG...CGACTGTTTTCCCAACACGGGTAAATCTAGTACCATGTCGTAGTTACTCTCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000382201.7
CDS-3UTR GCA 90 bp ACTAGATTTACCCGTGTTGGGAAAACAGTCGTCCTGCTGATTTCGGATTTGCCTCGCCTTTGGTGTTTCTaGACCTCGCAGAGGCGTGGC +
Preference number: 4 (lower is better)
Translates to: TRFTRVGKTVVLLISDLPRLWCF*TSQRRG
Trigger: GCCACGCCTCTGCGAGGTGCAGAAACACCAAAGGCG...AGGCAAATCCGAAATCAGCAGGACGACTGTTTTCCCAACACGGGTAAATCTAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000382201.7
CDS-3UTR GCA 90 bp TCATCCATGCCTGAGAGTAACTACGACATGGTACTAGATTTACCCGTGTTGGGAAGTGTCCTGCCACTTTaGCCTCAGAGGGCTCTCGGC +
Preference number: 4 (lower is better)
Translates to: SSMPESNYDMVLDLPVLGSVLPL*PQRALG
Trigger: GCCGAGAGCCCTCTGAGGGCAAAGTGGCAGGACACT...TCCCAACACGGGTAAATCTAGTACCATGTCGTAGTTACTCTCAGGCATGGATGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000469607.3
CDS-3UTR GCA 90 bp CCTGAGAGTAACTACGACATGGTACTAGATTTACCCGTGTTGGGAAAACAGTCGAGTGTCCTGCCACTTTaGCCTCAGAGGGCTCTCGGC +
Preference number: 4 (lower is better)
Translates to: PESNYDMVLDLPVLGKQSSVLPL*PQRALG
Trigger: GCCGAGAGCCCTCTGAGGGCAAAGTGGCAGGACACT...CGACTGTTTTCCCAACACGGGTAAATCTAGTACCATGTCGTAGTTACTCTCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000469607.3
CDS-3UTR GCA 90 bp AGACAGGAGGATTGCAAGAGTGGTGTTTCCAGGGTTCACAAAATAAAGATGTGTTCCTCCCACCGGCCCTaGAGGAAGCCAGGAGTGCTC +
Preference number: 4 (lower is better)
Translates to: RQEDCKSGVSRVHKIKMCSSHRP*RKPGVL
Trigger: GAGCACTCCTGGCTTCCTGCAGGGCCGGTGGGAGGA...ACACATCTTTATTTTGTGAACCCTGGAAACACCACTCTTGCAATCCTCCTGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329066.9
ENST00000422464.5
CDS-3UTR GCA 90 bp AAGCAAACGCCTGAAAGTGAGCCCTTAGTTTTGGAACCGGTTTGTACAAATGGAGGAGTAAGAGCAGTGTaGGGCAGGGCGGCTGCTGGA +
Preference number: 4 (lower is better)
Translates to: KQTPESEPLVLEPVCTNGGVRAV*GRAAAG
Trigger: TCCAGCAGCCGCCCTGCCGCACACTGCTCTTACTCC...TCCATTTGTACAAACCGGTTCCAAAACTAAGGGCTCACTTTCAGGCGTTTGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422464.5
CDS-3UTR GCA 90 bp AAAGAGTCGTACGGTGATTTTGGGAACATGAAGCTGTTCTGCAGTGTCCTGCCAGCCTCCCGGAGTCTTTaGAGAGGGGAGGCTGGAAAT +
Preference number: 4 (lower is better)
Translates to: KESYGDFGNMKLFCSVLPASRSL*RGEAGN
Trigger: ATTTCCAGCCTCCCCTCTGCAAAGACTCCGGGAGGC...TGGCAGGACACTGCAGAACAGCTTCATGTTCCCAAAATCACCGTACGACTCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346956.7
ENST00000422464.5
ENST00000469607.3
CDS-3UTR GCA 90 bp AAAGCTTTGACTGGCTTCAGTTTCGCATTATTTGGTCTGTCCTGCTGGAAGGTTGCAGGAACTCACTGCTaGCGGCTGAGGCCCTGGTCT +
Preference number: 4 (lower is better)
Translates to: KALTGFSFALFGLSCWKVAGTHC*RLRPWS
Trigger: AGACCAGGGCCTCAGCCGGCAGCAGTGAGTTCCTGC...AACCTTCCAGCAGGACAGACCAAATAATGCGAAACTGAAGCCAGTCAAAGCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382269.7
ENST00000539820.5
ENST00000617910.3
ENST00000629774.2
CDS-3UTR GCA 90 bp TTTGGAAAAGAGTCGTACGGTGATTTTGGGAACATGAAGCTGTTCTGCAGTGTCGAGCCCCAGCAGAGCTaGTCCGACACCCAGATCCTG +
Preference number: 4 (lower is better)
Translates to: FGKESYGDFGNMKLFCSVEPQQS*SDTQIL
Trigger: CAGGATCTGGGTGTCGGAGCAGCTCTGCTGGGGCTC...GACACTGCAGAACAGCTTCATGTTCCCAAAATCACCGTACGACTCTTTTCCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000422464.5
CDS-3UTR GCA 90 bp AAGCAAACGCCTGAAAGTGAGCCCTTAGTTTTGGAACCGGTTTGTACAAATGGAGAGCCCCAGCAGAGCTaGTCCGACACCCAGATCCTG +
Preference number: 4 (lower is better)
Translates to: KQTPESEPLVLEPVCTNGEPQQS*SDTQIL
Trigger: CAGGATCTGGGTGTCGGAGCAGCTCTGCTGGGGCTC...TCCATTTGTACAAACCGGTTCCAAAACTAAGGGCTCACTTTCAGGCGTTTGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422464.5
ENST00000625793.2
CDS-3UTR CCA 90 bp TTGCCTGTGTTTGGAAAAGAGTCGTACGGTGATTTTGGGAACATGAAGCTGTTCGCATCGTGGCGTACATaGCGGTGTCCACCAGGCGCT +
Preference number: 4 (lower is better)
Translates to: LPVFGKESYGDFGNMKLFASWRT*RCPPGA
Trigger: AGCGCCTGGTGGACACCGCCATGTACGCCACGATGC...GAACAGCTTCATGTTCCCAAAATCACCGTACGACTCTTTTCCAAACACAGGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
CDS-3UTR CCA 90 bp CCTGTGTTTGGAAAAGAGTCGTACGGTGATTTTGGGAACATGAAGCTGTTCTGCTGGAGGCGCCCCATCTaGGGTGGTCTCTGTTGTTGC +
Preference number: 4 (lower is better)
Translates to: PVFGKESYGDFGNMKLFCWRRPI*GGLCCC
Trigger: GCAACAACAGAGACCACCCCAGATGGGGCGCCTCCA...GCAGAACAGCTTCATGTTCCCAAAATCACCGTACGACTCTTTTCCAAACACAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR CCA 90 bp AGGCCAGACAAATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGTGCCAGGGCCGTGTTaGAGGCGCCCCATCTGGGGT +
Preference number: 4 (lower is better)
Translates to: RPDKCSYNIYSSMPESNYVPGPC*RRPIWG
Trigger: ACCCCAGATGGGGCGCCTCCAACACGGCCCTGGCAC...GTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATTTGTCTGGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR CCA 90 bp CCAGACAAATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACGTGCCAGGGCCGTGTTaGAGGCGCCCCATCTGGGGT +
Preference number: 4 (lower is better)
Translates to: PDKCSYNIYSSMPESNYDVPGPC*RRPIWG
Trigger: ACCCCAGATGGGGCGCCTCCAACACGGCCCTGGCAC...GTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATTTGTCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR CCA 90 bp CCTGAGAGTAACTACGACATGGTACTAGATTTACCCGTGTTGGGAAAACAGTCGGCCGTCCTCATAGACTaGAGGGAGCCATCGTGCCAG +
Preference number: 4 (lower is better)
Translates to: PESNYDMVLDLPVLGKQSAVLID*REPSCQ
Trigger: CTGGCACGATGGCTCCCTCCAGTCTATGAGGACGGC...CGACTGTTTTCCCAACACGGGTAAATCTAGTACCATGTCGTAGTTACTCTCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR CCA 90 bp GAGAGTAACTACGACATGGTACTAGATTTACCCGTGTTGGGAAAACAGTCGTCCCCGGACCGGGGGCAGTaGGAACCCGTTGTACAAGAA +
Preference number: 4 (lower is better)
Translates to: ESNYDMVLDLPVLGKQSSPDRGQ*EPVVQE
Trigger: TTCTTGTACAACGGGTTCCCACTGCCCCCGGTCCGG...GGACGACTGTTTTCCCAACACGGGTAAATCTAGTACCATGTCGTAGTTACTCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR CCA 90 bp CCTTCCTCTCCTGTGCTTCCAGCCGATCCTCAGATTAAGTGGAAGCAAACGCCTGTGAACGCGATGTCGTaGTCGATGTATTGTCCCCAT +
Preference number: 4 (lower is better)
Translates to: PSSPVLPADPQIKWKQTPVNAMS*SMYCPH
Trigger: ATGGGGACAATACATCGACCACGACATCGCGTTCAC...AGGCGTTTGCTTCCACTTAATCTGAGGATCGGCTGGAAGCACAGGAGAGGAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422464.5
ENST00000625793.2
CDS-3UTR CCA 90 bp TGCTTCCAGCCGATCCTCAGATTAAGTGGAAGCAAACGCCTGAAAGTGAGCCCTTTTGCTGGTGCTCTGTaGTGTGAACGCGATGTCGTG +
Preference number: 4 (lower is better)
Translates to: CFQPILRLSGSKRLKVSPFAGAL*CERDVV
Trigger: CACGACATCGCGTTCACACCACAGAGCACCAGCAAA...AGGGCTCACTTTCAGGCGTTTGCTTCCACTTAATCTGAGGATCGGCTGGAAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422464.5
ENST00000625793.2
CDS-3UTR CCA 90 bp AGACAGGAGGATTGCAAGAGTGGTGTTTCCAGGGTTCACAAAATAAAGATGTGTGCCGCGGGTTGGCCGTaGACAGGTTCCCAAAGAGCG +
Preference number: 4 (lower is better)
Translates to: RQEDCKSGVSRVHKIKMCAAGWP*TGSQRA
Trigger: CGCTCTTTGGGAACCTGTCCACGGCCAACCCGCGGC...ACACATCTTTATTTTGTGAACCCTGGAAACACCACTCTTGCAATCCTCCTGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329066.9
ENST00000422464.5
CDS-3UTR CCA 90 bp TCATCCATGCCTGAGAGTAACTACGACATGGTACTAGATTTACCCGTGTTGGGAAGCTGCCATACACGGTaGACGCGTCCAGGAACGAGG +
Preference number: 4 (lower is better)
Translates to: SSMPESNYDMVLDLPVLGSCHTR*TRPGTR
Trigger: CCTCGTTCCTGGACGCGTCCACCGTGTATGGCAGCT...TCCCAACACGGGTAAATCTAGTACCATGTCGTAGTTACTCTCAGGCATGGATGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR CCA 90 bp CCTGAGAGTAACTACGACATGGTACTAGATTTACCCGTGTTGGGAAAACAGTCGCGGGTCCCAGGATCCTaGGGATGTAATCCCTCAGGG +
Preference number: 4 (lower is better)
Translates to: PESNYDMVLDLPVLGKQSRVPGS*GCNPSG
Trigger: CCCTGAGGGATTACATCCCCAGGATCCTGGGACCCG...CGACTGTTTTCCCAACACGGGTAAATCTAGTACCATGTCGTAGTTACTCTCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR CCA 90 bp AGTAACTACGACATGGTACTAGATTTACCCGTGTTGGGAAAACAGTCGTCCTGCCGGGTCCCAGGATCCTaGGGATGTAATCCCTCAGGG +
Preference number: 4 (lower is better)
Translates to: SNYDMVLDLPVLGKQSSCRVPGS*GCNPSG
Trigger: CCCTGAGGGATTACATCCCCAGGATCCTGGGACCCG...GCAGGACGACTGTTTTCCCAACACGGGTAAATCTAGTACCATGTCGTAGTTACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR CCA 90 bp TATTCATCCATGCCTGAGAGTAACTACGACATGGTACTAGATTTACCCGTGTTGGGACCCACGTACTGCTaGAAGGCCTCGGGTCCCAGG +
Preference number: 4 (lower is better)
Translates to: YSSMPESNYDMVLDLPVLGPTYC*KASGPR
Trigger: CCTGGGACCCGAGGCCTTCCAGCAGTACGTGGGTCC...CAACACGGGTAAATCTAGTACCATGTCGTAGTTACTCTCAGGCATGGATGAATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR CCA 90 bp AGACAGGAGGATTGCAAGAGTGGTGTTTCCAGGGTTCACAAAATAAAGATGTGTCCAGCGGGTGGATCGTaGCATGGCCGAAGCGGAAGG +
Preference number: 4 (lower is better)
Translates to: RQEDCKSGVSRVHKIKMCPAGGS*HGRSGR
Trigger: CCTTCCGCTTCGGCCATGCCACGATCCACCCGCTGG...ACACATCTTTATTTTGTGAACCCTGGAAACACCACTCTTGCAATCCTCCTGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329066.9
ENST00000422464.5
CDS-3UTR CCA 90 bp GTGTTTGGAAAAGAGTCGTACGGTGATTTTGGGAACATGAAGCTGTTCTGCAGTCTCCTCACCAGCGGGTaGATCGTGGCATGGCCGAAG +
Preference number: 4 (lower is better)
Translates to: VFGKESYGDFGNMKLFCSLLTSG*IVAWPK
Trigger: CTTCGGCCATGCCACGATCCACCCGCTGGTGAGGAG...ACTGCAGAACAGCTTCATGTTCCCAAAATCACCGTACGACTCTTTTCCAAACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000469607.3
CDS-3UTR CCA 90 bp GGCCAGACAAATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGAGGTCGGGGTGCTCCTaGAAGCTGGCGTCCAGCCTC +
Preference number: 4 (lower is better)
Translates to: GQTNAAITFIHPCLRVTTRSGCS*KLASSL
Trigger: GAGGCTGGACGCCAGCTTCCAGGAGCACCCCGACCT...CGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATTTGTCTGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000446278.5
CDS-3UTR CCA 90 bp TATTCATCCATGCCTGAGAGTAACTACGACATGGTACTAGATTTACCCGTGTTGGGGCTGAAGAAAGCCTaGTGCAGCCACAGCCCGGGC +
Preference number: 4 (lower is better)
Translates to: YSSMPESNYDMVLDLPVLGLKKA*CSHSPG
Trigger: GCCCGGGCTGTGGCTGCACCAGGCTTTCTTCAGCCC...CAACACGGGTAAATCTAGTACCATGTCGTAGTTACTCTCAGGCATGGATGAATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000469607.3
CDS-3UTR CCA 90 bp CTGAAGCAAAATGTTCATAGCCCTCCTGTGCCACTGTTGTCATTCGTGGGTGAGCACCTGCAGTTTGGCTaGTCTTGCAAGAAGGCCTCG +
Preference number: 4 (lower is better)
Translates to: LKQNVHSPPVPLLSFVGEHLQFG*SCKKAS
Trigger: CGAGGCCTTCTTGCAAGACCAGCCAAACTGCAGGTG...CTCACCCACGAATGACAACAGTGGCACAGGAGGGCTATGAACATTTTGCTTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329066.9
ENST00000422464.5
CDS-3UTR CCA 90 bp CTGAAGCAAAATGTTCATAGCCCTCCTGTGCCACTGTTGTCATTCGTGGGTGAGCCTGCACCTGCAGTTTaGCTGGTCTTGCAAGAAGGC +
Preference number: 4 (lower is better)
Translates to: LKQNVHSPPVPLLSFVGEPAPAV*LVLQEG
Trigger: GCCTTCTTGCAAGACCAGCCAAACTGCAGGTGCAGG...CTCACCCACGAATGACAACAGTGGCACAGGAGGGCTATGAACATTTTGCTTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329066.9
ENST00000422464.5
CDS-3UTR CCA 90 bp TATTCATCCATGCCTGAGAGTAACTACGACATGGTACTAGATTTACCCGTGTTGCGGCCACGCTCCTGCTaGCGATGGCTGTGCTCAGGT +
Preference number: 4 (lower is better)
Translates to: YSSMPESNYDMVLDLPVLRPRSC*RWLCSG
Trigger: ACCTGAGCACAGCCATCGCCAGCAGGAGCGTGGCCG...CAACACGGGTAAATCTAGTACCATGTCGTAGTTACTCTCAGGCATGGATGAATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000469607.3
CDS-3UTR CCA 90 bp GGCCAGACAAATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGCGGCCACGCTCCTGCTaGCGATGGCTGTGCTCAGGT +
Preference number: 4 (lower is better)
Translates to: GQTNAAITFIHPCLRVTTRPRSC*RWLCSG
Trigger: ACCTGAGCACAGCCATCGCCAGCAGGAGCGTGGCCG...CGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATTTGTCTGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000446278.5
CDS-3UTR CCA 90 bp ACACAGAACAGGATGGCCTGGCACCTAGGGAAAACAACAGTCTGGTATTTTTGGGCCCTGTCCGAGCCCTaGGGAGGAAGTTTTCAGCTA +
Preference number: 4 (lower is better)
Translates to: TQNRMAWHLGKTTVWYFWALSEP*GGSFQL
Trigger: TAGCTGAAAACTTCCTCCCCAGGGCTCGGACAGGGC...CCAAAAATACCAGACTGTTGTTTTCCCTAGGTGCCAGGCCATCCTGTTCTGTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000329066.9
ENST00000422464.5
CDS-3UTR CCA 90 bp CGACATGGTACTAGATTTACCCGTGTTGGGAAAACAGTCGTCCTGCTGATTTCGGCCCTGTCCGAGCCCTaGGGAGGAAGTTTTCAGCTA +
Preference number: 4 (lower is better)
Translates to: RHGTRFTRVGKTVVLLISALSEP*GGSFQL
Trigger: TAGCTGAAAACTTCCTCCCCAGGGCTCGGACAGGGC...CGAAATCAGCAGGACGACTGTTTTCCCAACACGGGTAAATCTAGTACCATGTCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000469607.3
CDS-3UTR CCA 90 bp TGCTTCCAGCCGATCCTCAGATTAAGTGGAAGCAAACGCCTGAAAGTGAGCCCTGCATCCGTGAAGACGTaGCTGTTCTCCCACCAAAAC +
Preference number: 4 (lower is better)
Translates to: CFQPILRLSGSKRLKVSPASVKT*LFSHQN
Trigger: GTTTTGGTGGGAGAACAGCCACGTCTTCACGGATGC...AGGGCTCACTTTCAGGCGTTTGCTTCCACTTAATCTGAGGATCGGCTGGAAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422464.5
ENST00000625793.2
CDS-3UTR CCA 90 bp AGACAGGAGGATTGCAAGAGTGGTGTTTCCAGGGTTCACAAAATAAAGATGTGTAGCTGCTCCCGGCCTTaGAGCTCATACCCGTGCCGG +
Preference number: 4 (lower is better)
Translates to: RQEDCKSGVSRVHKIKMCSCSRP*SSYPCR
Trigger: CCGGCACGGGTATGAGCTCCAAGGCCGGGAGCAGCT...ACACATCTTTATTTTGTGAACCCTGGAAACACCACTCTTGCAATCCTCCTGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329066.9
ENST00000422464.5
CDS-3UTR CCA 90 bp ACTAGATTTACCCGTGTTGGGAAAACAGTCGTCCTGCTGATTTCGGATTTGCCTGAGGTCCCTACGGCCTaGTGCTTTCCGCATCTCAGC +
Preference number: 4 (lower is better)
Translates to: TRFTRVGKTVVLLISDLPEVPTA*CFPHLS
Trigger: GCTGAGATGCGGAAAGCACCAGGCCGTAGGGACCTC...AGGCAAATCCGAAATCAGCAGGACGACTGTTTTCCCAACACGGGTAAATCTAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000469607.3
CDS-3UTR CCA 90 bp ACTAGATTTACCCGTGTTGGGAAAACAGTCGTCCTGCTGATTTCGGATTTGCCTTGGAAAAACCAGTGCTaGAGGGACCGCCGGGGCAGA +
Preference number: 4 (lower is better)
Translates to: TRFTRVGKTVVLLISDLPWKNQC*RDRRGR
Trigger: TCTGCCCCGGCGGTCCCTCCAGCACTGGTTTTTCCA...AGGCAAATCCGAAATCAGCAGGACGACTGTTTTCCCAACACGGGTAAATCTAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000329066.9
ENST00000422464.5
CDS-3UTR CCA 90 bp ACAATGTGTGAAGCCTTGAACGTAGGAGATTTTAGATCCAGATGCTGTGAATTCTCCCAGGAGCGTCAGTaGAGCCCGCCCAGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: TMCEALNVGDFRSRCCEFSQERQ*SPPSSW
Trigger: CCAGCTGCTGGGCGGGCTCCACTGACGCTCCTGGGA...GAATTCACAGCATCTGGATCTAAAATCTCCTACGTTCAAGGCTTCACACATTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382269.7
ENST00000539820.5
ENST00000617910.3
ENST00000629774.2
CDS-3UTR CCA 90 bp TGCAGGACCCAGGGGCAGGCTTTGCAGGTGGATGTAGACGTCATTGGAGAAAAGGCCAATGTCATTGTGTaGTCAGCAGAGATTCTCCCA +
Preference number: 4 (lower is better)
Translates to: CRTQGQALQVDVDVIGEKANVIV*SAEILP
Trigger: TGGGAGAATCTCTGCTGACCACACAATGACATTGGC...CTTTTCTCCAATGACGTCTACATCCACCTGCAAAGCCTGCCCCTGGGTCCTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382269.7
ENST00000539820.5
ENST00000617910.3
ENST00000629774.2
CDS-3UTR CCA 90 bp TGCTTCCAGCCGATCCTCAGATTAAGTGGAAGCAAACGCCTGAAAGTGAGCCCTGTGGTCCCAGCACTTTaGGAGTTTCAGACTGGAGGA +
Preference number: 4 (lower is better)
Translates to: CFQPILRLSGSKRLKVSPVVPAL*EFQTGG
Trigger: TCCTCCAGTCTGAAACTCCCAAAGTGCTGGGACCAC...AGGGCTCACTTTCAGGCGTTTGCTTCCACTTAATCTGAGGATCGGCTGGAAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422464.5
CDS-3UTR CCA 90 bp AAAGAGTCGTACGGTGATTTTGGGAACATGAAGCTGTTCTGCAGTGTCCTGCCACAGGCCAGGTCCTTTTaGTTCCATGCGTGGGAGCCA +
Preference number: 4 (lower is better)
Translates to: KESYGDFGNMKLFCSVLPQARSF*FHAWEP
Trigger: TGGCTCCCACGCATGGAACCAAAAGGACCTGGCCTG...TGGCAGGACACTGCAGAACAGCTTCATGTTCCCAAAATCACCGTACGACTCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422464.5
CDS-3UTR CCA 90 bp GTGTCTGAGTTTGCTTTCAATGCCGAAGGACTCCTAACTATTGCCTTGCGTGAGGATGAACAGAACGCCTaGCCTTGCCCCTGGTGTCAG +
Preference number: 4 (lower is better)
Translates to: VSEFAFNAEGLLTIALREDEQNA*PCPWCQ
Trigger: CTGACACCAGGGGCAAGGCCAGGCGTTCTGTTCATC...CTCACGCAAGGCAATAGTTAGGAGTCCTTCGGCATTGAAAGCAAACTCAGACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422464.5
CDS-3UTR TCA 90 bp CAGGAGAAGAGGGAAGCCAGATGTAGGCCCTGTGGACACCTGGTGATGGGCAGGTTTCATCGCTTGTATTaGTGTTTCCATTATCTCTGC +
Preference number: 4 (lower is better)
Translates to: QEKREARCRPCGHLVMGRFHRLY*CFHYLC
Trigger: GCAGAGATAATGGAAACATCAATACAAGCGATGAAA...CCTGCCCATCACCAGGTGTCCACAGGGCCTACATCTGGCTTCCCTCTTCTCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329066.9
ENST00000422464.5
CDS-3UTR TCA 90 bp CAGGACCCAGGGGCAGGCTTTGCAGGTGGATGTAGACGTCATTGGAGAAAAGCTCAGACATGTTTGCAATaGTGCTCAGCAGATCTTCTG +
Preference number: 4 (lower is better)
Translates to: QDPGAGFAGGCRRHWRKAQTCLQ*CSADLL
Trigger: CAGAAGATCTGCTGAGCATCATTGCAAACATGTCTG...AGCTTTTCTCCAATGACGTCTACATCCACCTGCAAAGCCTGCCCCTGGGTCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382269.7
ENST00000539820.5
ENST00000617910.3
ENST00000629774.2
CDS-3UTR TCA 90 bp ACTAGATTTACCCGTGTTGGGAAAACAGTCGTCCTGCTGATTTCGGATTTGCCTTGGTGCTCTGTGGTGTaGACGCGATGTCGTGGTCGA +
Preference number: 4 (lower is better)
Translates to: TRFTRVGKTVVLLISDLPWCSVV*TRCRGR
Trigger: TCGACCACGACATCGCGTTCACACCACAGAGCACCA...AGGCAAATCCGAAATCAGCAGGACGACTGTTTTCCCAACACGGGTAAATCTAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR TCA 90 bp ACACAGAACAGGATGGCCTGGCACCTAGGGAAAACAACAGTCTGGTATTTTTGGGTAATGTCCATGGGCTaGAGAAAGCCTGGTGCAGCC +
Preference number: 4 (lower is better)
Translates to: TQNRMAWHLGKTTVWYFWVMSMG*RKPGAA
Trigger: GGCTGCACCAGGCTTTCTTCAGCCCATGGACATTAC...CCAAAAATACCAGACTGTTGTTTTCCCTAGGTGCCAGGCCATCCTGTTCTGTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329066.9
ENST00000422464.5
CDS-3UTR TCA 90 bp TTGCCTGTGTTTGGAAAAGAGTCGTACGGTGATTTTGGGAACATGAAGCTGTTCGCCTCTGTGCATCCGTaGAGACGTGGCTGTTCTCCC +
Preference number: 4 (lower is better)
Translates to: LPVFGKESYGDFGNMKLFASVHP*RRGCSP
Trigger: GGGAGAACAGCCACGTCTTCACGGATGCACAGAGGC...GAACAGCTTCATGTTCCCAAAATCACCGTACGACTCTTTTCCAAACACAGGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000469607.3
CDS-3UTR TCA 90 bp AAAGAGTCGTACGGTGATTTTGGGAACATGAAGCTGTTCTGCAGTGTCCTGCCACAGTGTTGTCACAGATaGCCCGAGACAGGGAGTGCT +
Preference number: 4 (lower is better)
Translates to: KESYGDFGNMKLFCSVLPQCCHR*PETGSA
Trigger: AGCACTCCCTGTCTCGGGTCATCTGTGACAACACTG...TGGCAGGACACTGCAGAACAGCTTCATGTTCCCAAAATCACCGTACGACTCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000469607.3
CDS-3UTR TCA 90 bp GGCCAGACAAATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGCTTCCTGGGTGCAAGTaGGCTGCTCCCGGCCTTGGA +
Preference number: 4 (lower is better)
Translates to: GQTNAAITFIHPCLRVTTLPGCK*AAPGLG
Trigger: TCCAAGGCCGGGAGCAGCTCACTTGCACCCAGGAAG...CGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATTTGTCTGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000446278.5
CDS-3UTR TCA 90 bp CTACGACATGGTACTAGATTTACCCGTGTTGGGAAAACAGTCGTCCTGCTGATTAAATCACCGTCGAGGTaGGACCTGCGAAGCCTCCGA +
Preference number: 4 (lower is better)
Translates to: LRHGTRFTRVGKTVVLLIKSPSR*DLRSLR
Trigger: TCGGAGGCTTCGCAGGTCTCACCTCGACGGTGATTT...AATCAGCAGGACGACTGTTTTCCCAACACGGGTAAATCTAGTACCATGTCGTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000469607.3
CDS-3UTR TCA 90 bp ACGCCTGAAAGTGAGCCCTTAGTTTTGGAACCGGTTTGTACAAATGGAAGGCATAAATCACCGTCGAGGTaGGACCTGCGAAGCCTCCGA +
Preference number: 4 (lower is better)
Translates to: TPESEPLVLEPVCTNGRHKSPSR*DLRSLR
Trigger: TCGGAGGCTTCGCAGGTCTCACCTCGACGGTGATTT...ATGCCTTCCATTTGTACAAACCGGTTCCAAAACTAAGGGCTCACTTTCAGGCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422464.5
ENST00000625793.2
CDS-3UTR TCA 90 bp ACTAGATTTACCCGTGTTGGGAAAACAGTCGTCCTGCTGATTTCGGATTTGCCTGAGTCAGGGAGGGAGTaGGTTTCCTCCGGGATCACT +
Preference number: 4 (lower is better)
Translates to: TRFTRVGKTVVLLISDLPESGRE*VSSGIT
Trigger: AGTGATCCCGGAGGAAACTCACTCCCTCCCTGACTC...AGGCAAATCCGAAATCAGCAGGACGACTGTTTTCCCAACACGGGTAAATCTAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329066.9
ENST00000422464.5
CDS-3UTR TCA 90 bp CTCCTTCCTCTCCTGTGCTTCCAGCCGATCCTCAGATTAAGTGGAAGCAAACGCCAGGTCAGATGTGTCTaGGTTTGCTTTCAATGCCGA +
Preference number: 4 (lower is better)
Translates to: LLPLLCFQPILRLSGSKRQVRCV*VCFQCR
Trigger: TCGGCATTGAAAGCAAACTCAGACACATCTGACCTG...GCGTTTGCTTCCACTTAATCTGAGGATCGGCTGGAAGCACAGGAGAGGAAGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422464.5
CDS-3UTR TCA 90 bp CAGGACCCAGGGGCAGGCTTTGCAGGTGGATGTAGACGTCATTGGAGAAAAGCTGTGGAATACAATGTGTaGAGCCTTGAACGTAGGAGA +
Preference number: 4 (lower is better)
Translates to: QDPGAGFAGGCRRHWRKAVEYNV*SLERRR
Trigger: TCTCCTACGTTCAAGGCTTCACACATTGTATTCCAC...AGCTTTTCTCCAATGACGTCTACATCCACCTGCAAAGCCTGCCCCTGGGTCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382269.7
ENST00000539820.5
ENST00000617910.3
ENST00000629774.2
CDS-3UTR GCA 90 bp TGCTTCCAGCCGATCCTCAGATTAAGTGGAAGCAAACGCCTGAAAGTGAGCCCTTTCCATTATCTCTGCTaGTCGGGCAATCACTCCGCT +
Preference number: 4 (lower is better)
Translates to: CFQPILRLSGSKRLKVSPFHYLC*SGNHSA
Trigger: AGCGGAGTGATTGCCCGAGCAGCAGAGATAATGGAA...AGGGCTCACTTTCAGGCGTTTGCTTCCACTTAATCTGAGGATCGGCTGGAAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422464.5
ENST00000625793.2
CDS-3UTR GCA 90 bp AAAGCCCCAGAAGGAACAAATCAGGCAATGTTTACAAGAAAAGGCCAGACAAATTGGAGGGAGCCATCGTaGCAGGGCCGTGTTGGAGGC +
Preference number: 4 (lower is better)
Translates to: KAPEGTNQAMFTRKGQTNWREPS*QGRVGG
Trigger: GCCTCCAACACGGCCCTGGCACGATGGCTCCCTCCA...ATTTGTCTGGCCTTTTCTTGTAAACATTGCCTGATTTGTTCCTTCTGGGGCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR GCA 90 bp CCAGACAAATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACCTAGGGCCGGGGAGCTaGCATACACGGTGGACGCGT +
Preference number: 4 (lower is better)
Translates to: PDKCSYNIYSSMPESNYDLGPGS*HTRWTR
Trigger: ACGCGTCCACCGTGTATGGCAGCTCCCCGGCCCTAG...GTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATTTGTCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR GCA 90 bp AGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACATGGTACTAGATGCGGCCAGGCGGTTGTaGTCGCGCAGCCACAGCGTG +
Preference number: 4 (lower is better)
Translates to: SYNIYSSMPESNYDMVLDAARRL*SRSHSV
Trigger: CACGCTGTGGCTGCGCGAGCACAACCGCCTGGCCGC...ATCTAGTACCATGTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR GCA 90 bp TCATCCATGCCTGAGAGTAACTACGACATGGTACTAGATTTACCCGTGTTGGGAAGGGTGATGATCTGGTaGAGAGCGCCCACGACCTTG +
Preference number: 4 (lower is better)
Translates to: SSMPESNYDMVLDLPVLGRVMIW*RAPTTL
Trigger: CAAGGTCGTGGGCGCTCTGCACCAGATCATCACCCT...TCCCAACACGGGTAAATCTAGTACCATGTCGTAGTTACTCTCAGGCATGGATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR GCA 90 bp CCTGTGTTTGGAAAAGAGTCGTACGGTGATTTTGGGAACATGAAGCTGTTCTGCAGGGTGATGATCTGGTaGAGAGCGCCCACGACCTTG +
Preference number: 4 (lower is better)
Translates to: PVFGKESYGDFGNMKLFCRVMIW*RAPTTL
Trigger: CAAGGTCGTGGGCGCTCTGCACCAGATCATCACCCT...GCAGAACAGCTTCATGTTCCCAAAATCACCGTACGACTCTTTTCCAAACACAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR GCA 90 bp AGTAACTACGACATGGTACTAGATTTACCCGTGTTGGGAAAACAGTCGTCCTGCAGGGTGATGATCTGGTaGAGAGCGCCCACGACCTTG +
Preference number: 4 (lower is better)
Translates to: SNYDMVLDLPVLGKQSSCRVMIW*RAPTTL
Trigger: CAAGGTCGTGGGCGCTCTGCACCAGATCATCACCCT...GCAGGACGACTGTTTTCCCAACACGGGTAAATCTAGTACCATGTCGTAGTTACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR GCA 90 bp ACTAGATTTACCCGTGTTGGGAAAACAGTCGTCCTGCTGATTTCGGATTTGCCTAGGGTGATGATCTGGTaGAGAGCGCCCACGACCTTG +
Preference number: 4 (lower is better)
Translates to: TRFTRVGKTVVLLISDLPRVMIW*RAPTTL
Trigger: CAAGGTCGTGGGCGCTCTGCACCAGATCATCACCCT...AGGCAAATCCGAAATCAGCAGGACGACTGTTTTCCCAACACGGGTAAATCTAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR GCA 90 bp ACTGTTCTGCTCTCTGCTTCTCTCAGTTCAAAAGTCAGACTTACACAAGTGAGTTGCTGGCGATGGCTGTaGTCAGGTCAGCGGGGGTCT +
Preference number: 4 (lower is better)
Translates to: TVLLSASLSSKVRLTQVSCWRWL*SGQRGS
Trigger: AGACCCCCGCTGACCTGAGCACAGCCATCGCCAGCA...ACTCACTTGTGTAAGTCTGACTTTTGAACTGAGAGAAGCAGAGAGCAGAACAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422464.5
ENST00000625793.2
CDS-3UTR GCA 90 bp GAAAGTGAGCCCTTAGTTTTGGAACCGGTTTGTACAAATGGAAGGCATCTTCATTGCTGGCGATGGCTGTaGTCAGGTCAGCGGGGGTCT +
Preference number: 4 (lower is better)
Translates to: ESEPLVLEPVCTNGRHLHCWRWL*SGQRGS
Trigger: AGACCCCCGCTGACCTGAGCACAGCCATCGCCAGCA...ATGAAGATGCCTTCCATTTGTACAAACCGGTTCCAAAACTAAGGGCTCACTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422464.5
ENST00000625793.2
CDS-3UTR GCA 90 bp ACGCCTGAAAGTGAGCCCTTAGTTTTGGAACCGGTTTGTACAAATGGAAGGCATCAGCTCACGCCTCTGTaGATCCGTGAAGACGTGGCT +
Preference number: 4 (lower is better)
Translates to: TPESEPLVLEPVCTNGRHQLTPL*IREDVA
Trigger: AGCCACGTCTTCACGGATGCACAGAGGCGTGAGCTG...ATGCCTTCCATTTGTACAAACCGGTTCCAAAACTAAGGGCTCACTTTCAGGCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422464.5
ENST00000625793.2
CDS-3UTR GCA 90 bp ACTAGATTTACCCGTGTTGGGAAAACAGTCGTCCTGCTGATTTCGGATTTGCCTTGGAGCTCATACCCGTaGCGGCAGGAATACACCAGC +
Preference number: 4 (lower is better)
Translates to: TRFTRVGKTVVLLISDLPWSSYP*RQEYTS
Trigger: GCTGGTGTATTCCTGCCGGCACGGGTATGAGCTCCA...AGGCAAATCCGAAATCAGCAGGACGACTGTTTTCCCAACACGGGTAAATCTAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000469607.3
CDS-3UTR GCA 90 bp TCATCCATGCCTGAGAGTAACTACGACATGGTACTAGATTTACCCGTGTTGGGATGGAGCTCATACCCGTaGCGGCAGGAATACACCAGC +
Preference number: 4 (lower is better)
Translates to: SSMPESNYDMVLDLPVLGWSSYP*RQEYTS
Trigger: GCTGGTGTATTCCTGCCGGCACGGGTATGAGCTCCA...TCCCAACACGGGTAAATCTAGTACCATGTCGTAGTTACTCTCAGGCATGGATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000469607.3
CDS-3UTR GCA 90 bp TTTGGAAAAGAGTCGTACGGTGATTTTGGGAACATGAAGCTGTTCTGCAGTGTCTGGGTGCAAGTGAGCTaGTCCCGGCCTTGGAGCTCA +
Preference number: 4 (lower is better)
Translates to: FGKESYGDFGNMKLFCSVWVQVS*SRPWSS
Trigger: TGAGCTCCAAGGCCGGGAGCAGCTCACTTGCACCCA...GACACTGCAGAACAGCTTCATGTTCCCAAAATCACCGTACGACTCTTTTCCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000469607.3
CDS-3UTR GCA 90 bp TTGCCTGTGTTTGGAAAAGAGTCGTACGGTGATTTTGGGAACATGAAGCTGTTCCGCCTTTGGTGTTTCTaGACCTCGCAGAGGCGTGGC +
Preference number: 4 (lower is better)
Translates to: LPVFGKESYGDFGNMKLFRLWCF*TSQRRG
Trigger: GCCACGCCTCTGCGAGGTGCAGAAACACCAAAGGCG...GAACAGCTTCATGTTCCCAAAATCACCGTACGACTCTTTTCCAAACACAGGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000382201.7
CDS-3UTR GCA 90 bp AAGCAAACGCCTGAAAGTGAGCCCTTAGTTTTGGAACCGGTTTGTACAAATGGACGTCGAGGTGAGACCTaGGAAGCCTCCGATCAGCAG +
Preference number: 4 (lower is better)
Translates to: KQTPESEPLVLEPVCTNGRRGET*EASDQQ
Trigger: CTGCTGATCGGAGGCTTCGCAGGTCTCACCTCGACG...TCCATTTGTACAAACCGGTTCCAAAACTAAGGGCTCACTTTCAGGCGTTTGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422464.5
ENST00000625793.2
CDS-3UTR GCA 90 bp TTGCCTGTGTTTGGAAAAGAGTCGTACGGTGATTTTGGGAACATGAAGCTGTTCGTCCCTACGGCCTGGTaGTTTCCGCATCTCAGCTCG +
Preference number: 4 (lower is better)
Translates to: LPVFGKESYGDFGNMKLFVPTAW*FPHLSS
Trigger: CGAGCTGAGATGCGGAAAGCACCAGGCCGTAGGGAC...GAACAGCTTCATGTTCCCAAAATCACCGTACGACTCTTTTCCAAACACAGGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000469607.3
CDS-3UTR GCA 90 bp GATTTGCCTGTGTTTGGAAAAGAGTCGTACGGTGATTTTGGGAACATGAAGCTGGTCCCTACGGCCTGGTaGTTTCCGCATCTCAGCTCG +
Preference number: 4 (lower is better)
Translates to: DLPVFGKESYGDFGNMKLVPTAW*FPHLSS
Trigger: CGAGCTGAGATGCGGAAAGCACCAGGCCGTAGGGAC...CAGCTTCATGTTCCCAAAATCACCGTACGACTCTTTTCCAAACACAGGCAAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000469607.3
CDS-3UTR GCA 90 bp TCATCCATGCCTGAGAGTAACTACGACATGGTACTAGATTTACCCGTGTTGGGAGCAGGAAGCCAGGAGTaGTCTTCCCAGGAGAAGAGG +
Preference number: 4 (lower is better)
Translates to: SSMPESNYDMVLDLPVLGAGSQE*SSQEKR
Trigger: CCTCTTCTCCTGGGAAGAGCACTCCTGGCTTCCTGC...TCCCAACACGGGTAAATCTAGTACCATGTCGTAGTTACTCTCAGGCATGGATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329066.9
ENST00000422464.5
CDS-3UTR GCA 90 bp GTGTCTGAGTTTGCTTTCAATGCCGAAGGACTCCTAACTATTGCCTTGCGTGAGCTCCTTCCTCTCCTGTaGTTCCAGCCGATCCTCAGA +
Preference number: 4 (lower is better)
Translates to: VSEFAFNAEGLLTIALRELLPLL*FQPILR
Trigger: TCTGAGGATCGGCTGGAAGCACAGGAGAGGAAGGAG...CTCACGCAAGGCAATAGTTAGGAGTCCTTCGGCATTGAAAGCAAACTCAGACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422464.5
CDS-3UTR CCA 90 bp ACACAGAACAGGATGGCCTGGCACCTAGGGAAAACAACAGTCTGGTATTTTTGGGGTTTCTCTGCATCGTaGCGTACATGGCGGTGTCCA +
Preference number: 4 (lower is better)
Translates to: TQNRMAWHLGKTTVWYFWGFSAS*RTWRCP
Trigger: TGGACACCGCCATGTACGCCACGATGCAGAGAAACC...CCAAAAATACCAGACTGTTGTTTTCCCTAGGTGCCAGGCCATCCTGTTCTGTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000329066.9
CDS-3UTR CCA 90 bp AAAGAGTCGTACGGTGATTTTGGGAACATGAAGCTGTTCTGCAGTGTCCTGCCACGCCAGGCAAGTGTTTaGGCATTTTGGGGGCAGCAT +
Preference number: 4 (lower is better)
Translates to: KESYGDFGNMKLFCSVLPRQASV*AFWGQH
Trigger: ATGCTGCCCCCAAAATGCCCAAACACTTGCCTGGCG...TGGCAGGACACTGCAGAACAGCTTCATGTTCCCAAAATCACCGTACGACTCTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR CCA 90 bp AGTAACTACGACATGGTACTAGATTTACCCGTGTTGGGAAAACAGTCGTCCTGCGCGCCCCATCTGGGGTaGTCTCTGTTGTTGCAAGCT +
Preference number: 4 (lower is better)
Translates to: SNYDMVLDLPVLGKQSSCAPHLG*SLLLQA
Trigger: AGCTTGCAACAACAGAGACCACCCCAGATGGGGCGC...GCAGGACGACTGTTTTCCCAACACGGGTAAATCTAGTACCATGTCGTAGTTACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR CCA 90 bp GTGTTTGGAAAAGAGTCGTACGGTGATTTTGGGAACATGAAGCTGTTCTGCAGTGCCGTCCTCATAGACTaGAGGGAGCCATCGTGCCAG +
Preference number: 4 (lower is better)
Translates to: VFGKESYGDFGNMKLFCSAVLID*REPSCQ
Trigger: CTGGCACGATGGCTCCCTCCAGTCTATGAGGACGGC...ACTGCAGAACAGCTTCATGTTCCCAAAATCACCGTACGACTCTTTTCCAAACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR CCA 90 bp GATTTGCCTGTGTTTGGAAAAGAGTCGTACGGTGATTTTGGGAACATGAAGCTGGCCGTCCTCATAGACTaGAGGGAGCCATCGTGCCAG +
Preference number: 4 (lower is better)
Translates to: DLPVFGKESYGDFGNMKLAVLID*REPSCQ
Trigger: CTGGCACGATGGCTCCCTCCAGTCTATGAGGACGGC...CAGCTTCATGTTCCCAAAATCACCGTACGACTCTTTTCCAAACACAGGCAAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR CCA 90 bp GATTTGCCTGTGTTTGGAAAAGAGTCGTACGGTGATTTTGGGAACATGAAGCTGCCGGACCGGGGGCAGTaGGAACCCGTTGTACAAGAA +
Preference number: 4 (lower is better)
Translates to: DLPVFGKESYGDFGNMKLPDRGQ*EPVVQE
Trigger: TTCTTGTACAACGGGTTCCCACTGCCCCCGGTCCGG...CAGCTTCATGTTCCCAAAATCACCGTACGACTCTTTTCCAAACACAGGCAAATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR CCA 90 bp TTTGGAAAAGAGTCGTACGGTGATTTTGGGAACATGAAGCTGTTCTGCAGTGTCCCGGACCGGGGGCAGTaGGAACCCGTTGTACAAGAA +
Preference number: 4 (lower is better)
Translates to: FGKESYGDFGNMKLFCSVPDRGQ*EPVVQE
Trigger: TTCTTGTACAACGGGTTCCCACTGCCCCCGGTCCGG...GACACTGCAGAACAGCTTCATGTTCCCAAAATCACCGTACGACTCTTTTCCAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR CCA 90 bp TGCTTCCAGCCGATCCTCAGATTAAGTGGAAGCAAACGCCTGAAAGTGAGCCCTGTGAACGCGATGTCGTaGTCGATGTATTGTCCCCAT +
Preference number: 4 (lower is better)
Translates to: CFQPILRLSGSKRLKVSPVNAMS*SMYCPH
Trigger: ATGGGGACAATACATCGACCACGACATCGCGTTCAC...AGGGCTCACTTTCAGGCGTTTGCTTCCACTTAATCTGAGGATCGGCTGGAAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422464.5
ENST00000625793.2
CDS-3UTR CCA 90 bp GAAATGAGGACGGCAGCTTTACAGGGTCGCGTGGCTAACGGTGCCCCCGAGACTTTGTATGGGAAAACATaGGTTTTGGTTCTCACAAGT +
Preference number: 4 (lower is better)
Translates to: EMRTAALQGRVANGAPETLYGKT*VLVLTS
Trigger: ACTTGTGAGAACCAAAACCCATGTTTTCCCATACAA...AGTCTCGGGGGCACCGTTAGCCACGCGACCCTGTAAAGCTGCCGTCCTCATTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000329066.9
ENST00000422464.5
CDS-3UTR CCA 90 bp GTGCTTCCAGCCGATCCTCAGATTAAGTGGAAGCAAACGCCTGAAAGTGAGCCCCCTCCGGGAGTTGTATaGGAAAACATGGGTTTTGGT +
Preference number: 4 (lower is better)
Translates to: VLPADPQIKWKQTPESEPPPGVV*ENMGFG
Trigger: ACCAAAACCCATGTTTTCCCATACAACTCCCGGAGG...GGGCTCACTTTCAGGCGTTTGCTTCCACTTAATCTGAGGATCGGCTGGAAGCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000422464.5
ENST00000625793.2
CDS-3UTR CCA 90 bp AGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACATGGTACTAGATCCAAAGAGCGCGCCTTaGTCCCCGGTGCCGCAGGCG +
Preference number: 4 (lower is better)
Translates to: SYNIYSSMPESNYDMVLDPKSAP*SPVPQA
Trigger: CGCCTGCGGCACCGGGGACCAAGGCGCGCTCTTTGG...ATCTAGTACCATGTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR CCA 90 bp CCAGACAAATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACGCCGCGGGTTGGCCGTaGACAGGTTCCCAAAGAGCG +
Preference number: 4 (lower is better)
Translates to: PDKCSYNIYSSMPESNYDAAGWP*TGSQRA
Trigger: CGCTCTTTGGGAACCTGTCCACGGCCAACCCGCGGC...GTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATTTGTCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR CCA 90 bp GGCCAGACAAATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGTCTGCTGCCGCGGGTTaGCCGTGGACAGGTTCCCAA +
Preference number: 4 (lower is better)
Translates to: GQTNAAITFIHPCLRVTTSAAAG*PWTGSQ
Trigger: TTGGGAACCTGTCCACGGCCAACCCGCGGCAGCAGA...CGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATTTGTCTGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR CCA 90 bp GAAAGTGAGCCCTTAGTTTTGGAACCGGTTTGTACAAATGGAAGGCATCTTCATTCTGCTGCCGCGGGTTaGCCGTGGACAGGTTCCCAA +
Preference number: 4 (lower is better)
Translates to: ESEPLVLEPVCTNGRHLHSAAAG*PWTGSQ
Trigger: TTGGGAACCTGTCCACGGCCAACCCGCGGCAGCAGA...ATGAAGATGCCTTCCATTTGTACAAACCGGTTCCAAAACTAAGGGCTCACTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422464.5
ENST00000625793.2
CDS-3UTR CCA 90 bp GATTTGCCTGTGTTTGGAAAAGAGTCGTACGGTGATTTTGGGAACATGAAGCTGAGCTGCCATACACGGTaGACGCGTCCAGGAACGAGG +
Preference number: 4 (lower is better)
Translates to: DLPVFGKESYGDFGNMKLSCHTR*TRPGTR
Trigger: CCTCGTTCCTGGACGCGTCCACCGTGTATGGCAGCT...CAGCTTCATGTTCCCAAAATCACCGTACGACTCTTTTCCAAACACAGGCAAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR CCA 90 bp AAAGCCCCAGAAGGAACAAATCAGGCAATGTTTACAAGAAAAGGCCAGACAAATGCAGCCCTTCGGCACTaGTCCAGTTCCGCAGCTGCC +
Preference number: 4 (lower is better)
Translates to: KAPEGTNQAMFTRKGQTNAALRH*SSSAAA
Trigger: GGCAGCTGCGGAACTGGACCAGTGCCGAAGGGCTGC...ATTTGTCTGGCCTTTTCTTGTAAACATTGCCTGATTTGTTCCTTCTGGGGCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR CCA 90 bp CAGACAAATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACAACCTTGCGCGCCTCCTaGTACACGGCGTCCGCGCTC +
Preference number: 4 (lower is better)
Translates to: QTNAAITFIHPCLRVTTTTLRAS*YTASAL
Trigger: GAGCGCGGACGCCGTGTACCAGGAGGCGCGCAAGGT...TGTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATTTGTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR CCA 90 bp AAGCAAACGCCTGAAAGTGAGCCCTTAGTTTTGGAACCGGTTTGTACAAATGGACGGGTCCCAGGATCCTaGGGATGTAATCCCTCAGGG +
Preference number: 4 (lower is better)
Translates to: KQTPESEPLVLEPVCTNGRVPGS*GCNPSG
Trigger: CCCTGAGGGATTACATCCCCAGGATCCTGGGACCCG...TCCATTTGTACAAACCGGTTCCAAAACTAAGGGCTCACTTTCAGGCGTTTGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422464.5
ENST00000625793.2
CDS-3UTR CCA 90 bp ACTAGATTTACCCGTGTTGGGAAAACAGTCGTCCTGCTGATTTCGGATTTGCCTCTGTGGAGAACACGTTaGACACAGTGGGGTTGGCGG +
Preference number: 4 (lower is better)
Translates to: TRFTRVGKTVVLLISDLPLWRTR*TQWGWR
Trigger: CCGCCAACCCCACTGTGTCCAACGTGTTCTCCACAG...AGGCAAATCCGAAATCAGCAGGACGACTGTTTTCCCAACACGGGTAAATCTAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000469607.3
CDS-3UTR CCA 90 bp CCTGTGTTTGGAAAAGAGTCGTACGGTGATTTTGGGAACATGAAGCTGTTCTGCAGCGGAAGGCGGCTGTaGAGAACACGTTGGACACAG +
Preference number: 4 (lower is better)
Translates to: PVFGKESYGDFGNMKLFCSGRRL*RTRWTQ
Trigger: CTGTGTCCAACGTGTTCTCCACAGCCGCCTTCCGCT...GCAGAACAGCTTCATGTTCCCAAAATCACCGTACGACTCTTTTCCAAACACAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000469607.3
CDS-3UTR CCA 90 bp GAGAGTAACTACGACATGGTACTAGATTTACCCGTGTTGGGAAAACAGTCGTCCAGCGGAAGGCGGCTGTaGAGAACACGTTGGACACAG +
Preference number: 4 (lower is better)
Translates to: ESNYDMVLDLPVLGKQSSSGRRL*RTRWTQ
Trigger: CTGTGTCCAACGTGTTCTCCACAGCCGCCTTCCGCT...GGACGACTGTTTTCCCAACACGGGTAAATCTAGTACCATGTCGTAGTTACTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000469607.3
CDS-3UTR CCA 90 bp CCAGACAAATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACGGGTGGATCGTGGCATaGCCGAAGCGGAAGGCGGCT +
Preference number: 4 (lower is better)
Translates to: PDKCSYNIYSSMPESNYDGWIVA*PKRKAA
Trigger: AGCCGCCTTCCGCTTCGGCCATGCCACGATCCACCC...GTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATTTGTCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000446278.5
CDS-3UTR CCA 90 bp AAAGCCCCAGAAGGAACAAATCAGGCAATGTTTACAAGAAAAGGCCAGACAAATCCAGCGGGTGGATCGTaGCATGGCCGAAGCGGAAGG +
Preference number: 4 (lower is better)
Translates to: KAPEGTNQAMFTRKGQTNPAGGS*HGRSGR
Trigger: CCTTCCGCTTCGGCCATGCCACGATCCACCCGCTGG...ATTTGTCTGGCCTTTTCTTGTAAACATTGCCTGATTTGTTCCTTCTGGGGCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR CCA 90 bp GAAAGTGAGCCCTTAGTTTTGGAACCGGTTTGTACAAATGGAAGGCATCTTCATCTCCTCACCAGCGGGTaGATCGTGGCATGGCCGAAG +
Preference number: 4 (lower is better)
Translates to: ESEPLVLEPVCTNGRHLHLLTSG*IVAWPK
Trigger: CTTCGGCCATGCCACGATCCACCCGCTGGTGAGGAG...ATGAAGATGCCTTCCATTTGTACAAACCGGTTCCAAAACTAAGGGCTCACTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422464.5
ENST00000625793.2
CDS-3UTR CCA 90 bp AAAGCCCCAGAAGGAACAAATCAGGCAATGTTTACAAGAAAAGGCCAGACAAATGGGCTGAAGAAAGCCTaGTGCAGCCACAGCCCGGGC +
Preference number: 4 (lower is better)
Translates to: KAPEGTNQAMFTRKGQTNGLKKA*CSHSPG
Trigger: GCCCGGGCTGTGGCTGCACCAGGCTTTCTTCAGCCC...ATTTGTCTGGCCTTTTCTTGTAAACATTGCCTGATTTGTTCCTTCTGGGGCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR CCA 90 bp ACACAGAACAGGATGGCCTGGCACCTAGGGAAAACAACAGTCTGGTATTTTTGGCACCTGCAGTTTGGCTaGTCTTGCAAGAAGGCCTCG +
Preference number: 4 (lower is better)
Translates to: TQNRMAWHLGKTTVWYFWHLQFG*SCKKAS
Trigger: CGAGGCCTTCTTGCAAGACCAGCCAAACTGCAGGTG...CCAAAAATACCAGACTGTTGTTTTCCCTAGGTGCCAGGCCATCCTGTTCTGTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329066.9
ENST00000422464.5
CDS-3UTR CCA 90 bp AGGCCAGACAAATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACCGCTCCTGCTGGCGATaGCTGTGCTCAGGTCAGCGG +
Preference number: 4 (lower is better)
Translates to: RPDKCSYNIYSSMPESNYRSCWR*LCSGQR
Trigger: CCGCTGACCTGAGCACAGCCATCGCCAGCAGGAGCG...GTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATTTGTCTGGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR CCA 90 bp GGTACTAGATTTACCCGTGTTGGGAAAACAGTCGTCCTGCTGATTTCGGATTTGGCCCTGTCCGAGCCCTaGGGAGGAAGTTTTCAGCTA +
Preference number: 4 (lower is better)
Translates to: GTRFTRVGKTVVLLISDLALSEP*GGSFQL
Trigger: TAGCTGAAAACTTCCTCCCCAGGGCTCGGACAGGGC...CAAATCCGAAATCAGCAGGACGACTGTTTTCCCAACACGGGTAAATCTAGTACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000469607.3
CDS-3UTR CCA 90 bp ACTAGATTTACCCGTGTTGGGAAAACAGTCGTCCTGCTGATTTCGGATTTGCCTGCCCTGTCCGAGCCCTaGGGAGGAAGTTTTCAGCTA +
Preference number: 4 (lower is better)
Translates to: TRFTRVGKTVVLLISDLPALSEP*GGSFQL
Trigger: TAGCTGAAAACTTCCTCCCCAGGGCTCGGACAGGGC...AGGCAAATCCGAAATCAGCAGGACGACTGTTTTCCCAACACGGGTAAATCTAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000469607.3
CDS-3UTR CCA 90 bp ACGCCTGAAAGTGAGCCCTTAGTTTTGGAACCGGTTTGTACAAATGGAAGGCATGCCCTGTCCGAGCCCTaGGGAGGAAGTTTTCAGCTA +
Preference number: 4 (lower is better)
Translates to: TPESEPLVLEPVCTNGRHALSEP*GGSFQL
Trigger: TAGCTGAAAACTTCCTCCCCAGGGCTCGGACAGGGC...ATGCCTTCCATTTGTACAAACCGGTTCCAAAACTAAGGGCTCACTTTCAGGCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422464.5
ENST00000625793.2
CDS-3UTR CCA 90 bp ACTAGATTTACCCGTGTTGGGAAAACAGTCGTCCTGCTGATTTCGGATTTGCCTGAGCAGCCAGCGACATaGAGATCCAAGTCACCCGAG +
Preference number: 4 (lower is better)
Translates to: TRFTRVGKTVVLLISDLPEQPAT*RSKSPE
Trigger: CTCGGGTGACTTGGATCTCCATGTCGCTGGCTGCTC...AGGCAAATCCGAAATCAGCAGGACGACTGTTTTCCCAACACGGGTAAATCTAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000469607.3
CDS-3UTR CCA 90 bp GGTACTAGATTTACCCGTGTTGGGAAAACAGTCGTCCTGCTGATTTCGGATTTGGAGCAGCCAGCGACATaGAGATCCAAGTCACCCGAG +
Preference number: 4 (lower is better)
Translates to: GTRFTRVGKTVVLLISDLEQPAT*RSKSPE
Trigger: CTCGGGTGACTTGGATCTCCATGTCGCTGGCTGCTC...CAAATCCGAAATCAGCAGGACGACTGTTTTCCCAACACGGGTAAATCTAGTACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000469607.3
CDS-3UTR CCA 90 bp CCTGAGAGTAACTACGACATGGTACTAGATTTACCCGTGTTGGGAAAACAGTCGGAGCAGCCAGCGACATaGAGATCCAAGTCACCCGAG +
Preference number: 4 (lower is better)
Translates to: PESNYDMVLDLPVLGKQSEQPAT*RSKSPE
Trigger: CTCGGGTGACTTGGATCTCCATGTCGCTGGCTGCTC...CGACTGTTTTCCCAACACGGGTAAATCTAGTACCATGTCGTAGTTACTCTCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000469607.3
CDS-3UTR CCA 90 bp GGCAAAGGTTCCTACTCACAGAGTGGGATCTGCAATCCGCAGGCAGGGTCCTTCTCAGTGCTGCCTCGATaGTCTGTTTTATCCATGAAT +
Preference number: 4 (lower is better)
Translates to: GKGSYSQSGICNPQAGSFSVLPR*SVLSMN
Trigger: ATTCATGGATAAAACAGACCATCGAGGCAGCACTGA...GAAGGACCCTGCCTGCGGATTGCAGATCCCACTCTGTGAGTAGGAACCTTTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422464.5
CDS-3UTR CCA 90 bp CAGGACCCAGGGGCAGGCTTTGCAGGTGGATGTAGACGTCATTGGAGAAAAGCTCAGTTTCGCATTATTTaGTCTGTCCTGCTGGAAGGT +
Preference number: 4 (lower is better)
Translates to: QDPGAGFAGGCRRHWRKAQFRII*SVLLEG
Trigger: ACCTTCCAGCAGGACAGACCAAATAATGCGAAACTG...AGCTTTTCTCCAATGACGTCTACATCCACCTGCAAAGCCTGCCCCTGGGTCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382269.7
ENST00000539820.5
ENST00000617910.3
ENST00000629774.2
CDS-3UTR CCA 90 bp CAAACCAAAGAAAGGTTCAGGCTCTACTGCAGGACCCAGGGGCAGGCTTTGCAGCAGTTTCGCATTATTTaGTCTGTCCTGCTGGAAGGT +
Preference number: 4 (lower is better)
Translates to: QTKERFRLYCRTQGQALQQFRII*SVLLEG
Trigger: ACCTTCCAGCAGGACAGACCAAATAATGCGAAACTG...CTGCAAAGCCTGCCCCTGGGTCCTGCAGTAGAGCCTGAACCTTTCTTTGGTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382269.7
ENST00000539820.5
ENST00000617910.3
ENST00000629774.2
CDS-3UTR CCA 90 bp AGCAGGAACTCACTGCTGCCGGCTGAGGCCCTGGTCTTGAGGTTGTTAAAATGTGCCAATGTCATTGTGTaGTCAGCAGAGATTCTCCCA +
Preference number: 4 (lower is better)
Translates to: SRNSLLPAEALVLRLLKCANVIV*SAEILP
Trigger: TGGGAGAATCTCTGCTGACCACACAATGACATTGGC...ACATTTTAACAACCTCAAGACCAGGGCCTCAGCCGGCAGCAGTGAGTTCCTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382269.7
ENST00000539820.5
ENST00000617910.3
ENST00000629774.2
CDS-3UTR CCA 90 bp AGTAACTACGACATGGTACTAGATTTACCCGTGTTGGGAAAACAGTCGTCCTGCCACTGCGGTGGCAGCTaGAAACATGCGGCATGGTGT +
Preference number: 4 (lower is better)
Translates to: SNYDMVLDLPVLGKQSSCHCGGS*KHAAWC
Trigger: ACACCATGCCGCATGTTTCCAGCTGCCACCGCAGTG...GCAGGACGACTGTTTTCCCAACACGGGTAAATCTAGTACCATGTCGTAGTTACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422464.5
CDS-3UTR CCA 90 bp AAGCAAACGCCTGAAAGTGAGCCCTTAGTTTTGGAACCGGTTTGTACAAATGGACTCCCCACTCCCCTCTaGAGGCCACTGTTCTGCTCT +
Preference number: 4 (lower is better)
Translates to: KQTPESEPLVLEPVCTNGLPTPL*RPLFCS
Trigger: AGAGCAGAACAGTGGCCTCCAGAGGGGAGTGGGGAG...TCCATTTGTACAAACCGGTTCCAAAACTAAGGGCTCACTTTCAGGCGTTTGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000422464.5
ENST00000625793.2
3UTR CAA 72 bp GGTGAATCTCTGGAGGATGAGACAAGTCACTTTGCCTaGTTGGTCCTTAAGGCTCCAGCCTCTCCCTCAGAA +
Preference number: 4 (lower is better)
Translates to: GESLEDETSHFA*LVLKAPASPSE
Trigger: TTCTGAGGGAGAGGCTGGAGCCTTAAGGACCAACAAGGCAAAGTGACTTGTCTCATCCTCCAGAGATTCACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329066.9
ENST00000422464.5
3UTR CAA 72 bp GTGTTGGTGAATCTCTGGAGGATGAGACAAGTCACTTaGCCTTGTTGGTCCTTAAGGCTCCAGCCTCTCCCT +
Preference number: 4 (lower is better)
Translates to: VLVNLWRMRQVT*PCWSLRLQPLP
Trigger: AGGGAGAGGCTGGAGCCTTAAGGACCAACAAGGCAAAGTGACTTGTCTCATCCTCCAGAGATTCACCAACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329066.9
ENST00000422464.5
CDS-3UTR TCA 90 bp AAAGAGTCGTACGGTGATTTTGGGAACATGAAGCTGTTCTGCAGTGTCCTGCCACTTTCCCTCTCGAGATaGAGGGGAAGAAGGCTTCTG +
Preference number: 4 (lower is better)
Translates to: KESYGDFGNMKLFCSVLPLSLSR*RGRRLL
Trigger: CAGAAGCCTTCTTCCCCTTCATCTCGAGAGGGAAAG...TGGCAGGACACTGCAGAACAGCTTCATGTTCCCAAAATCACCGTACGACTCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
CDS-3UTR TCA 90 bp CAAACCAAAGAAAGGTTCAGGCTCTACTGCAGGACCCAGGGGCAGGCTTTGCAGATCCGTTGGATGCTGTaGTTGTTGAGTTTTCAGGTT +
Preference number: 4 (lower is better)
Translates to: QTKERFRLYCRTQGQALQIRWML*LLSFQV
Trigger: AACCTGAAAACTCAACAATCACAGCATCCAACGGAT...CTGCAAAGCCTGCCCCTGGGTCCTGCAGTAGAGCCTGAACCTTTCTTTGGTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382269.7
ENST00000539820.5
ENST00000617910.3
ENST00000629774.2
CDS-3UTR TCA 90 bp CCTGAGAGTAACTACGACATGGTACTAGATTTACCCGTGTTGGGAAAACAGTCGGTAATGTCCATGGGCTaGAGAAAGCCTGGTGCAGCC +
Preference number: 4 (lower is better)
Translates to: PESNYDMVLDLPVLGKQSVMSMG*RKPGAA
Trigger: GGCTGCACCAGGCTTTCTTCAGCCCATGGACATTAC...CGACTGTTTTCCCAACACGGGTAAATCTAGTACCATGTCGTAGTTACTCTCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000469607.3
CDS-3UTR TCA 90 bp CTACGACATGGTACTAGATTTACCCGTGTTGGGAAAACAGTCGTCCTGCTGATTGTAATGTCCATGGGCTaGAGAAAGCCTGGTGCAGCC +
Preference number: 4 (lower is better)
Translates to: LRHGTRFTRVGKTVVLLIVMSMG*RKPGAA
Trigger: GGCTGCACCAGGCTTTCTTCAGCCCATGGACATTAC...AATCAGCAGGACGACTGTTTTCCCAACACGGGTAAATCTAGTACCATGTCGTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000469607.3
CDS-3UTR TCA 90 bp ACTAGATTTACCCGTGTTGGGAAAACAGTCGTCCTGCTGATTTCGGATTTGCCTGTAATGTCCATGGGCTaGAGAAAGCCTGGTGCAGCC +
Preference number: 4 (lower is better)
Translates to: TRFTRVGKTVVLLISDLPVMSMG*RKPGAA
Trigger: GGCTGCACCAGGCTTTCTTCAGCCCATGGACATTAC...AGGCAAATCCGAAATCAGCAGGACGACTGTTTTCCCAACACGGGTAAATCTAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000469607.3
CDS-3UTR TCA 90 bp GTGTCTGAGTTTGCTTTCAATGCCGAAGGACTCCTAACTATTGCCTTGCGTGAGTCCTCGTTCATCAGCTaGTCCTGCACCTGCAGTTTG +
Preference number: 4 (lower is better)
Translates to: VSEFAFNAEGLLTIALRESSFIS*SCTCSL
Trigger: CAAACTGCAGGTGCAGGATCAGCTGATGAACGAGGA...CTCACGCAAGGCAATAGTTAGGAGTCCTTCGGCATTGAAAGCAAACTCAGACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329066.9
ENST00000422464.5
CDS-3UTR TCA 90 bp TATTCATCCATGCCTGAGAGTAACTACGACATGGTACTAGATTTACCCGTGTTGGCCTCTGTGCATCCGTaGAGACGTGGCTGTTCTCCC +
Preference number: 4 (lower is better)
Translates to: YSSMPESNYDMVLDLPVLASVHP*RRGCSP
Trigger: GGGAGAACAGCCACGTCTTCACGGATGCACAGAGGC...CAACACGGGTAAATCTAGTACCATGTCGTAGTTACTCTCAGGCATGGATGAATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000469607.3
CDS-3UTR TCA 90 bp TTGGTGAATCTCTGGAGGATGAGACAAGTCACTTTGCCTTGTTGGTCCTTAAGGCAGTGTTGTCACAGATaGCCCGAGACAGGGAGTGCT +
Preference number: 4 (lower is better)
Translates to: LVNLWRMRQVTLPCWSLRQCCHR*PETGSA
Trigger: AGCACTCCCTGTCTCGGGTCATCTGTGACAACACTG...CCTTAAGGACCAACAAGGCAAAGTGACTTGTCTCATCCTCCAGAGATTCACCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329066.9
ENST00000422464.5
CDS-3UTR TCA 90 bp GAGAGTAACTACGACATGGTACTAGATTTACCCGTGTTGGGAAAACAGTCGTCCCAGTGTTGTCACAGATaGCCCGAGACAGGGAGTGCT +
Preference number: 4 (lower is better)
Translates to: ESNYDMVLDLPVLGKQSSQCCHR*PETGSA
Trigger: AGCACTCCCTGTCTCGGGTCATCTGTGACAACACTG...GGACGACTGTTTTCCCAACACGGGTAAATCTAGTACCATGTCGTAGTTACTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000469607.3
CDS-3UTR TCA 90 bp CTACGACATGGTACTAGATTTACCCGTGTTGGGAAAACAGTCGTCCTGCTGATTCAGTGTTGTCACAGATaGCCCGAGACAGGGAGTGCT +
Preference number: 4 (lower is better)
Translates to: LRHGTRFTRVGKTVVLLIQCCHR*PETGSA
Trigger: AGCACTCCCTGTCTCGGGTCATCTGTGACAACACTG...AATCAGCAGGACGACTGTTTTCCCAACACGGGTAAATCTAGTACCATGTCGTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000469607.3
CDS-3UTR TCA 90 bp CCTGAGAGTAACTACGACATGGTACTAGATTTACCCGTGTTGGGAAAACAGTCGCAGTGTTGTCACAGATaGCCCGAGACAGGGAGTGCT +
Preference number: 4 (lower is better)
Translates to: PESNYDMVLDLPVLGKQSQCCHR*PETGSA
Trigger: AGCACTCCCTGTCTCGGGTCATCTGTGACAACACTG...CGACTGTTTTCCCAACACGGGTAAATCTAGTACCATGTCGTAGTTACTCTCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000469607.3
CDS-3UTR TCA 90 bp ACTGTTCTGCTCTCTGCTTCTCTCAGTTCAAAAGTCAGACTTACACAAGTGAGTCCATGGGCACCCTGGTaGGGCCAGTGTTGTCACAGA +
Preference number: 4 (lower is better)
Translates to: TVLLSASLSSKVRLTQVSPWAPW*GQCCHR
Trigger: TCTGTGACAACACTGGCCTCACCAGGGTGCCCATGG...ACTCACTTGTGTAAGTCTGACTTTTGAACTGAGAGAAGCAGAGAGCAGAACAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422464.5
ENST00000625793.2
CDS-3UTR TCA 90 bp AGGCCAGACAAATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGCTCTCGGCAGCCTGTaGGTATCCCGGCCTTCCATC +
Preference number: 4 (lower is better)
Translates to: RPDKCSYNIYSSMPESNYALGSL*VSRPSI
Trigger: GATGGAAGGCCGGGATACTCACAGGCTGCCGAGAGC...GTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATTTGTCTGGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR TCA 90 bp AAAGCCCCAGAAGGAACAAATCAGGCAATGTTTACAAGAAAAGGCCAGACAAATGCTCTCGGCAGCCTGTaGGTATCCCGGCCTTCCATC +
Preference number: 4 (lower is better)
Translates to: KAPEGTNQAMFTRKGQTNALGSL*VSRPSI
Trigger: GATGGAAGGCCGGGATACTCACAGGCTGCCGAGAGC...ATTTGTCTGGCCTTTTCTTGTAAACATTGCCTGATTTGTTCCTTCTGGGGCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR TCA 90 bp AAGTTTCTGGCTTCCGGACAAATGCTTGTTTGCAGGAGGCCACAGAGGATCCACGTGATTTTGGGAACATaGAGCTGTTCTGCAGTGTCC +
Preference number: 4 (lower is better)
Translates to: KFLASGQMLVCRRPQRIHVILGT*SCSAVS
Trigger: GGACACTGCAGAACAGCTTCATGTTCCCAAAATCAC...GTGGATCCTCTGTGGCCTCCTGCAAACAAGCATTTGTCCGGAAGCCAGAAACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422464.5
CDS-3UTR TCA 90 bp AGTCACTTTGCCTTGTTGGTCCTTAAGGCTCCAGCCTCTCCCTCAGAATCACTTCAGCTGCTTCACATGTaGAATGAGGACGGCAGCTTT +
Preference number: 4 (lower is better)
Translates to: SHFALLVLKAPASPSESLQLLHM*NEDGSF
Trigger: AAAGCTGCCGTCCTCATTTCACATGTGAAGCAGCTG...AAGTGATTCTGAGGGAGAGGCTGGAGCCTTAAGGACCAACAAGGCAAAGTGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329066.9
ENST00000422464.5
CDS-3UTR TCA 90 bp CCAGTGCCAATGTCATTGTGTGGTCAGCAGAGATTCTCCCAGGAGCGTCAGTGGATTGGAGAAAAGCTTTaGCTGGCTTCAGTTTCGCAT +
Preference number: 4 (lower is better)
Translates to: PVPMSLCGQQRFSQERQWIGEKL*LASVSH
Trigger: ATGCGAAACTGAAGCCAGTCAAAGCTTTTCTCCAAT...CCACTGACGCTCCTGGGAGAATCTCTGCTGACCACACAATGACATTGGCACTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382269.7
ENST00000539820.5
ENST00000617910.3
ENST00000629774.2
CDS-3UTR TCA 90 bp CAGGACCCAGGGGCAGGCTTTGCAGGTGGATGTAGACGTCATTGGAGAAAAGCTATTGGAGAAAAGCTTTaGCTGGCTTCAGTTTCGCAT +
Preference number: 4 (lower is better)
Translates to: QDPGAGFAGGCRRHWRKAIGEKL*LASVSH
Trigger: ATGCGAAACTGAAGCCAGTCAAAGCTTTTCTCCAAT...AGCTTTTCTCCAATGACGTCTACATCCACCTGCAAAGCCTGCCCCTGGGTCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000382269.7
ENST00000539820.5
ENST00000617910.3
ENST00000629774.2
CDS-3UTR TCA 90 bp GAAAGTGAGCCCTTAGTTTTGGAACCGGTTTGTACAAATGGAAGGCATCTTCATAGGAAGAAGCCGTGCTaGGCACACAGGTCCCTGCGA +
Preference number: 4 (lower is better)
Translates to: ESEPLVLEPVCTNGRHLHRKKPC*AHRSLR
Trigger: TCGCAGGGACCTGTGTGCTCAGCACGGCTTCTTCCT...ATGAAGATGCCTTCCATTTGTACAAACCGGTTCCAAAACTAAGGGCTCACTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422464.5
CDS-3UTR GCA 90 bp AGTCACTTTGCCTTGTTGGTCCTTAAGGCTCCAGCCTCTCCCTCAGAATCACTTTTCTTGAGGTTTCTCTaGATCGTGGCGTACATGGCG +
Preference number: 4 (lower is better)
Translates to: SHFALLVLKAPASPSESLFLRFL*IVAYMA
Trigger: CGCCATGTACGCCACGATGCAGAGAAACCTCAAGAA...AAGTGATTCTGAGGGAGAGGCTGGAGCCTTAAGGACCAACAAGGCAAAGTGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329066.9
CDS-3UTR GCA 90 bp CTGTGCTTCCAGCCGATCCTCAGATTAAGTGGAAGCAAACGCCTGAAAGTGAGCTGTTTCCATTATCTCTaGTGCTCGGGCAATCACTCC +
Preference number: 4 (lower is better)
Translates to: LCFQPILRLSGSKRLKVSCFHYL*CSGNHS
Trigger: GGAGTGATTGCCCGAGCAGCAGAGATAATGGAAACA...GCTCACTTTCAGGCGTTTGCTTCCACTTAATCTGAGGATCGGCTGGAAGCACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422464.5
ENST00000625793.2
CDS-3UTR GCA 90 bp TGCAGGACCCAGGGGCAGGCTTTGCAGGTGGATGTAGACGTCATTGGAGAAAAGACATCCAGACATGTTTaGAATGATGCTCAGCAGATC +
Preference number: 4 (lower is better)
Translates to: CRTQGQALQVDVDVIGEKTSRHV*NDAQQI
Trigger: GATCTGCTGAGCATCATTGCAAACATGTCTGGATGT...CTTTTCTCCAATGACGTCTACATCCACCTGCAAAGCCTGCCCCTGGGTCCTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382269.7
ENST00000539820.5
ENST00000617910.3
ENST00000629774.2
CDS-3UTR GCA 90 bp AAAGCCCCAGAAGGAACAAATCAGGCAATGTTTACAAGAAAAGGCCAGACAAATAACCCGTTCATCTGCTaGCGCGGGTTGGCCGTGGAC +
Preference number: 4 (lower is better)
Translates to: KAPEGTNQAMFTRKGQTNNPFIC*RGLAVD
Trigger: GTCCACGGCCAACCCGCGGCAGCAGATGAACGGGTT...ATTTGTCTGGCCTTTTCTTGTAAACATTGCCTGATTTGTTCCTTCTGGGGCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR GCA 90 bp ACAAATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACATGGCTAGGGCCGGGGAGCTaGCATACACGGTGGACGCGT +
Preference number: 4 (lower is better)
Translates to: TNAAITFIHPCLRVTTTWLGPGS*HTRWTR
Trigger: ACGCGTCCACCGTGTATGGCAGCTCCCCGGCCCTAG...CCATGTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR GCA 90 bp TGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACATGGTACTACCACAGCGTGTGCAGTaGCGTCAGGGAGGGGACCTC +
Preference number: 4 (lower is better)
Translates to: CSYNIYSSMPESNYDMVLPQRVQ*RQGGDL
Trigger: GAGGTCCCCTCCCTGACGGCACTGCACACGCTGTGG...TAGTACCATGTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR GCA 90 bp CAGACAAATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACAGCGTCCGCGCTCCAGTaGGCATTGAGGGCCTTGAGC +
Preference number: 4 (lower is better)
Translates to: QTNAAITFIHPCLRVTTTASALQ*ALRALS
Trigger: GCTCAAGGCCCTCAATGCGCACTGGAGCGCGGACGC...TGTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATTTGTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR GCA 90 bp AAGCAAACGCCTGAAAGTGAGCCCTTAGTTTTGGAACCGGTTTGTACAAATGGAAGGGTGATGATCTGGTaGAGAGCGCCCACGACCTTG +
Preference number: 4 (lower is better)
Translates to: KQTPESEPLVLEPVCTNGRVMIW*RAPTTL
Trigger: CAAGGTCGTGGGCGCTCTGCACCAGATCATCACCCT...TCCATTTGTACAAACCGGTTCCAAAACTAAGGGCTCACTTTCAGGCGTTTGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422464.5
ENST00000625793.2
CDS-3UTR GCA 90 bp CTCCTTCCTCTCCTGTGCTTCCAGCCGATCCTCAGATTAAGTGGAAGCAAACGCTCGATGTTGTCAGGATaGTTGTACAAGTCCAGGATC +
Preference number: 4 (lower is better)
Translates to: LLPLLCFQPILRLSGSKRSMLSG*LYKSRI
Trigger: GATCCTGGACTTGTACAAGCATCCTGACAACATCGA...GCGTTTGCTTCCACTTAATCTGAGGATCGGCTGGAAGCACAGGAGAGGAAGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422464.5
ENST00000625793.2
CDS-3UTR GCA 90 bp GATTTGCCTGTGTTTGGAAAAGAGTCGTACGGTGATTTTGGGAACATGAAGCTGCAGCTCACGCCTCTGTaGATCCGTGAAGACGTGGCT +
Preference number: 4 (lower is better)
Translates to: DLPVFGKESYGDFGNMKLQLTPL*IREDVA
Trigger: AGCCACGTCTTCACGGATGCACAGAGGCGTGAGCTG...CAGCTTCATGTTCCCAAAATCACCGTACGACTCTTTTCCAAACACAGGCAAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000469607.3
CDS-3UTR GCA 90 bp TTTGGAAAAGAGTCGTACGGTGATTTTGGGAACATGAAGCTGTTCTGCAGTGTCCAGCTCACGCCTCTGTaGATCCGTGAAGACGTGGCT +
Preference number: 4 (lower is better)
Translates to: FGKESYGDFGNMKLFCSVQLTPL*IREDVA
Trigger: AGCCACGTCTTCACGGATGCACAGAGGCGTGAGCTG...GACACTGCAGAACAGCTTCATGTTCCCAAAATCACCGTACGACTCTTTTCCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000469607.3
CDS-3UTR GCA 90 bp TCATCCATGCCTGAGAGTAACTACGACATGGTACTAGATTTACCCGTGTTGGGAGGGGTGGGCACCGTCTaGACACTCGTTCACATCTTT +
Preference number: 4 (lower is better)
Translates to: SSMPESNYDMVLDLPVLGGVGTV*TLVHIF
Trigger: AAAGATGTGAACGAGTGTGCAGACGGTGCCCACCCC...TCCCAACACGGGTAAATCTAGTACCATGTCGTAGTTACTCTCAGGCATGGATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000382201.7
CDS-3UTR GCA 90 bp GGTACTAGATTTACCCGTGTTGGGAAAACAGTCGTCCTGCTGATTTCGGATTTGTGTTCTGCAGTGTCCTaGCACTTTGCCCTCAGAGGG +
Preference number: 4 (lower is better)
Translates to: GTRFTRVGKTVVLLISDLCSAVS*HFALRG
Trigger: CCCTCTGAGGGCAAAGTGGCAGGACACTGCAGAACA...CAAATCCGAAATCAGCAGGACGACTGTTTTCCCAACACGGGTAAATCTAGTACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000469607.3
CDS-3UTR GCA 90 bp CTACGACATGGTACTAGATTTACCCGTGTTGGGAAAACAGTCGTCCTGCTGATTTGTTCTGCAGTGTCCTaGCACTTTGCCCTCAGAGGG +
Preference number: 4 (lower is better)
Translates to: LRHGTRFTRVGKTVVLLICSAVS*HFALRG
Trigger: CCCTCTGAGGGCAAAGTGGCAGGACACTGCAGAACA...AATCAGCAGGACGACTGTTTTCCCAACACGGGTAAATCTAGTACCATGTCGTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000469607.3
CDS-3UTR GCA 90 bp CTGTGCTTCCAGCCGATCCTCAGATTAAGTGGAAGCAAACGCCTGAAAGTGAGCAACATGAAGCTGTTCTaGAGTGTCCTGCCACTTTGC +
Preference number: 4 (lower is better)
Translates to: LCFQPILRLSGSKRLKVSNMKLF*SVLPLC
Trigger: GCAAAGTGGCAGGACACTGCAGAACAGCTTCATGTT...GCTCACTTTCAGGCGTTTGCTTCCACTTAATCTGAGGATCGGCTGGAAGCACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422464.5
CDS-3UTR GCA 90 bp TTGCCTGTGTTTGGAAAAGAGTCGTACGGTGATTTTGGGAACATGAAGCTGTTCGCCTCCCGGAGTCTTTaGAGAGGGGAGGCTGGAAAT +
Preference number: 4 (lower is better)
Translates to: LPVFGKESYGDFGNMKLFASRSL*RGEAGN
Trigger: ATTTCCAGCCTCCCCTCTGCAAAGACTCCGGGAGGC...GAACAGCTTCATGTTCCCAAAATCACCGTACGACTCTTTTCCAAACACAGGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000346956.7
ENST00000422464.5
ENST00000469607.3
CDS-3UTR GCA 90 bp GAATCTCTGGAGGATGAGACAAGTCACTTTGCCTTGTTGGTCCTTAAGGCTCCAGTCCTTTTGGTTCCATaGGTGGGAGCCAGGTGCAAA +
Preference number: 4 (lower is better)
Translates to: ESLEDETSHFALLVLKAPVLLVP*VGARCK
Trigger: TTTGCACCTGGCTCCCACGCATGGAACCAAAAGGAC...TGGAGCCTTAAGGACCAACAAGGCAAAGTGACTTGTCTCATCCTCCAGAGATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422464.5
CDS-3UTR CCA 90 bp ACAATGTGTGAAGCCTTGAACGTAGGAGATTTTAGATCCAGATGCTGTGAATTCGCATCGTGGCGTACATaGCGGTGTCCACCAGGCGCT +
Preference number: 4 (lower is better)
Translates to: TMCEALNVGDFRSRCCEFASWRT*RCPPGA
Trigger: AGCGCCTGGTGGACACCGCCATGTACGCCACGATGC...GAATTCACAGCATCTGGATCTAAAATCTCCTACGTTCAAGGCTTCACACATTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382269.7
ENST00000539820.5
ENST00000617910.3
ENST00000629774.2
CDS-3UTR CCA 90 bp CCTGTGTTTGGAAAAGAGTCGTACGGTGATTTTGGGAACATGAAGCTGTTCTGCGGTTTCTCTGCATCGTaGCGTACATGGCGGTGTCCA +
Preference number: 4 (lower is better)
Translates to: PVFGKESYGDFGNMKLFCGFSAS*RTWRCP
Trigger: TGGACACCGCCATGTACGCCACGATGCAGAGAAACC...GCAGAACAGCTTCATGTTCCCAAAATCACCGTACGACTCTTTTCCAAACACAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
CDS-3UTR CCA 90 bp CAGGACCCAGGGGCAGGCTTTGCAGGTGGATGTAGACGTCATTGGAGAAAAGCTAGACAGAAGCTGAGCTaGAGAAAGGATTCCTCTTTT +
Preference number: 4 (lower is better)
Translates to: QDPGAGFAGGCRRHWRKARQKLS*RKDSSF
Trigger: AAAAGAGGAATCCTTTCTCCAGCTCAGCTTCTGTCT...AGCTTTTCTCCAATGACGTCTACATCCACCTGCAAAGCCTGCCCCTGGGTCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382269.7
ENST00000539820.5
ENST00000617910.3
ENST00000629774.2
CDS-3UTR CCA 90 bp TGCAGGACCCAGGGGCAGGCTTTGCAGGTGGATGTAGACGTCATTGGAGAAAAGAGACAGAAGCTGAGCTaGAGAAAGGATTCCTCTTTT +
Preference number: 4 (lower is better)
Translates to: CRTQGQALQVDVDVIGEKRQKLS*RKDSSF
Trigger: AAAAGAGGAATCCTTTCTCCAGCTCAGCTTCTGTCT...CTTTTCTCCAATGACGTCTACATCCACCTGCAAAGCCTGCCCCTGGGTCCTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382269.7
ENST00000539820.5
ENST00000617910.3
ENST00000629774.2
CDS-3UTR CCA 90 bp CCAGTGCCAATGTCATTGTGTGGTCAGCAGAGATTCTCCCAGGAGCGTCAGTGGAATCACTCCGCTTGTTaGCTCAGGAAGTTTGGAAAA +
Preference number: 4 (lower is better)
Translates to: PVPMSLCGQQRFSQERQWNHSAC*LRKFGK
Trigger: TTTTCCAAACTTCCTGAGCCAACAAGCGGAGTGATT...CCACTGACGCTCCTGGGAGAATCTCTGCTGACCACACAATGACATTGGCACTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382269.7
ENST00000539820.5
ENST00000617910.3
ENST00000629774.2
CDS-3UTR CCA 90 bp CAGGACCCAGGGGCAGGCTTTGCAGGTGGATGTAGACGTCATTGGAGAAAAGCTAATCACTCCGCTTGTTaGCTCAGGAAGTTTGGAAAA +
Preference number: 4 (lower is better)
Translates to: QDPGAGFAGGCRRHWRKANHSAC*LRKFGK
Trigger: TTTTCCAAACTTCCTGAGCCAACAAGCGGAGTGATT...AGCTTTTCTCCAATGACGTCTACATCCACCTGCAAAGCCTGCCCCTGGGTCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382269.7
ENST00000539820.5
ENST00000617910.3
ENST00000629774.2
CDS-3UTR CCA 90 bp CCTGAGAGTAACTACGACATGGTACTAGATTTACCCGTGTTGGGAAAACAGTCGCGCCAGGCAAGTGTTTaGGCATTTTGGGGGCAGCAT +
Preference number: 4 (lower is better)
Translates to: PESNYDMVLDLPVLGKQSRQASV*AFWGQH
Trigger: ATGCTGCCCCCAAAATGCCCAAACACTTGCCTGGCG...CGACTGTTTTCCCAACACGGGTAAATCTAGTACCATGTCGTAGTTACTCTCAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR CCA 90 bp AGTAACTACGACATGGTACTAGATTTACCCGTGTTGGGAAAACAGTCGTCCTGCCGCCAGGCAAGTGTTTaGGCATTTTGGGGGCAGCAT +
Preference number: 4 (lower is better)
Translates to: SNYDMVLDLPVLGKQSSCRQASV*AFWGQH
Trigger: ATGCTGCCCCCAAAATGCCCAAACACTTGCCTGGCG...GCAGGACGACTGTTTTCCCAACACGGGTAAATCTAGTACCATGTCGTAGTTACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR CCA 90 bp GTGTTTGGAAAAGAGTCGTACGGTGATTTTGGGAACATGAAGCTGTTCTGCAGTGCGCCCCATCTGGGGTaGTCTCTGTTGTTGCAAGCT +
Preference number: 4 (lower is better)
Translates to: VFGKESYGDFGNMKLFCSAPHLG*SLLLQA
Trigger: AGCTTGCAACAACAGAGACCACCCCAGATGGGGCGC...ACTGCAGAACAGCTTCATGTTCCCAAAATCACCGTACGACTCTTTTCCAAACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR CCA 90 bp GGCCAGACAAATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGTGGAGGCGCCCCATCTaGGGTGGTCTCTGTTGTTGC +
Preference number: 4 (lower is better)
Translates to: GQTNAAITFIHPCLRVTTWRRPI*GGLCCC
Trigger: GCAACAACAGAGACCACCCCAGATGGGGCGCCTCCA...CGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATTTGTCTGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR CCA 90 bp TATTCATCCATGCCTGAGAGTAACTACGACATGGTACTAGATTTACCCGTGTTGTGGAGGCGCCCCATCTaGGGTGGTCTCTGTTGTTGC +
Preference number: 4 (lower is better)
Translates to: YSSMPESNYDMVLDLPVLWRRPI*GGLCCC
Trigger: GCAACAACAGAGACCACCCCAGATGGGGCGCCTCCA...CAACACGGGTAAATCTAGTACCATGTCGTAGTTACTCTCAGGCATGGATGAATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR CCA 90 bp GAAAGTGAGCCCTTAGTTTTGGAACCGGTTTGTACAAATGGAAGGCATCTTCATTGGAGGCGCCCCATCTaGGGTGGTCTCTGTTGTTGC +
Preference number: 4 (lower is better)
Translates to: ESEPLVLEPVCTNGRHLHWRRPI*GGLCCC
Trigger: GCAACAACAGAGACCACCCCAGATGGGGCGCCTCCA...ATGAAGATGCCTTCCATTTGTACAAACCGGTTCCAAAACTAAGGGCTCACTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422464.5
ENST00000625793.2
CDS-3UTR CCA 90 bp AGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACATGGTACTAGATGTGCCAGGGCCGTGTTaGAGGCGCCCCATCTGGGGT +
Preference number: 4 (lower is better)
Translates to: SYNIYSSMPESNYDMVLDVPGPC*RRPIWG
Trigger: ACCCCAGATGGGGCGCCTCCAACACGGCCCTGGCAC...ATCTAGTACCATGTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR CCA 90 bp TATTCATCCATGCCTGAGAGTAACTACGACATGGTACTAGATTTACCCGTGTTGCCGGACCGGGGGCAGTaGGAACCCGTTGTACAAGAA +
Preference number: 4 (lower is better)
Translates to: YSSMPESNYDMVLDLPVLPDRGQ*EPVVQE
Trigger: TTCTTGTACAACGGGTTCCCACTGCCCCCGGTCCGG...CAACACGGGTAAATCTAGTACCATGTCGTAGTTACTCTCAGGCATGGATGAATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR CCA 90 bp AATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACATGGTACGCCGCGGGTTGGCCGTaGACAGGTTCCCAAAGAGCG +
Preference number: 4 (lower is better)
Translates to: NAAITFIHPCLRVTTTWYAAGWP*TGSQRA
Trigger: CGCTCTTTGGGAACCTGTCCACGGCCAACCCGCGGC...GTACCATGTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR CCA 90 bp CCAGACAAATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACTCTGCTGCCGCGGGTTaGCCGTGGACAGGTTCCCAA +
Preference number: 4 (lower is better)
Translates to: PDKCSYNIYSSMPESNYDSAAAG*PWTGSQ
Trigger: TTGGGAACCTGTCCACGGCCAACCCGCGGCAGCAGA...GTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATTTGTCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR CCA 90 bp AAAGCCCCAGAAGGAACAAATCAGGCAATGTTTACAAGAAAAGGCCAGACAAATTCTGCTGCCGCGGGTTaGCCGTGGACAGGTTCCCAA +
Preference number: 4 (lower is better)
Translates to: KAPEGTNQAMFTRKGQTNSAAAG*PWTGSQ
Trigger: TTGGGAACCTGTCCACGGCCAACCCGCGGCAGCAGA...ATTTGTCTGGCCTTTTCTTGTAAACATTGCCTGATTTGTTCCTTCTGGGGCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR CCA 90 bp AATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACATGGTACGCAGCCCTTCGGCACTaGTCCAGTTCCGCAGCTGCC +
Preference number: 4 (lower is better)
Translates to: NAAITFIHPCLRVTTTWYAALRH*SSSAAA
Trigger: GGCAGCTGCGGAACTGGACCAGTGCCGAAGGGCTGC...GTACCATGTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR CCA 90 bp GACAAATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACATGGCAGCCCTTCGGCACTaGTCCAGTTCCGCAGCTGCC +
Preference number: 4 (lower is better)
Translates to: DKCSYNIYSSMPESNYDMAALRH*SSSAAA
Trigger: GGCAGCTGCGGAACTGGACCAGTGCCGAAGGGCTGC...CATGTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATTTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR CCA 90 bp TTGGTGAATCTCTGGAGGATGAGACAAGTCACTTTGCCTTGTTGGTCCTTAAGGCAGTGGGGTTGGCGGTaGAGTCATAGCCTTCATAGG +
Preference number: 4 (lower is better)
Translates to: LVNLWRMRQVTLPCWSLRQWGWR*SHSLHR
Trigger: CCTATGAAGGCTATGACTCCACCGCCAACCCCACTG...CCTTAAGGACCAACAAGGCAAAGTGACTTGTCTCATCCTCCAGAGATTCACCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329066.9
ENST00000422464.5
CDS-3UTR CCA 90 bp AGTAACTACGACATGGTACTAGATTTACCCGTGTTGGGAAAACAGTCGTCCTGCCAGTGGGGTTGGCGGTaGAGTCATAGCCTTCATAGG +
Preference number: 4 (lower is better)
Translates to: SNYDMVLDLPVLGKQSSCQWGWR*SHSLHR
Trigger: CCTATGAAGGCTATGACTCCACCGCCAACCCCACTG...GCAGGACGACTGTTTTCCCAACACGGGTAAATCTAGTACCATGTCGTAGTTACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR CCA 90 bp CCTGAGAGTAACTACGACATGGTACTAGATTTACCCGTGTTGGGAAAACAGTCGCAGTGGGGTTGGCGGTaGAGTCATAGCCTTCATAGG +
Preference number: 4 (lower is better)
Translates to: PESNYDMVLDLPVLGKQSQWGWR*SHSLHR
Trigger: CCTATGAAGGCTATGACTCCACCGCCAACCCCACTG...CGACTGTTTTCCCAACACGGGTAAATCTAGTACCATGTCGTAGTTACTCTCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR CCA 90 bp ACGCCTGAAAGTGAGCCCTTAGTTTTGGAACCGGTTTGTACAAATGGAAGGCATCAGTGGGGTTGGCGGTaGAGTCATAGCCTTCATAGG +
Preference number: 4 (lower is better)
Translates to: TPESEPLVLEPVCTNGRHQWGWR*SHSLHR
Trigger: CCTATGAAGGCTATGACTCCACCGCCAACCCCACTG...ATGCCTTCCATTTGTACAAACCGGTTCCAAAACTAAGGGCTCACTTTCAGGCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422464.5
ENST00000625793.2
CDS-3UTR CCA 90 bp GATTTGCCTGTGTTTGGAAAAGAGTCGTACGGTGATTTTGGGAACATGAAGCTGCTGTGGAGAACACGTTaGACACAGTGGGGTTGGCGG +
Preference number: 4 (lower is better)
Translates to: DLPVFGKESYGDFGNMKLLWRTR*TQWGWR
Trigger: CCGCCAACCCCACTGTGTCCAACGTGTTCTCCACAG...CAGCTTCATGTTCCCAAAATCACCGTACGACTCTTTTCCAAACACAGGCAAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000469607.3
CDS-3UTR CCA 90 bp TTTGGAAAAGAGTCGTACGGTGATTTTGGGAACATGAAGCTGTTCTGCAGTGTCAGCGGAAGGCGGCTGTaGAGAACACGTTGGACACAG +
Preference number: 4 (lower is better)
Translates to: FGKESYGDFGNMKLFCSVSGRRL*RTRWTQ
Trigger: CTGTGTCCAACGTGTTCTCCACAGCCGCCTTCCGCT...GACACTGCAGAACAGCTTCATGTTCCCAAAATCACCGTACGACTCTTTTCCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000469607.3
CDS-3UTR CCA 90 bp GATTTGCCTGTGTTTGGAAAAGAGTCGTACGGTGATTTTGGGAACATGAAGCTGAGCGGAAGGCGGCTGTaGAGAACACGTTGGACACAG +
Preference number: 4 (lower is better)
Translates to: DLPVFGKESYGDFGNMKLSGRRL*RTRWTQ
Trigger: CTGTGTCCAACGTGTTCTCCACAGCCGCCTTCCGCT...CAGCTTCATGTTCCCAAAATCACCGTACGACTCTTTTCCAAACACAGGCAAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000469607.3
CDS-3UTR CCA 90 bp AATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACATGGTACCCAGCGGGTGGATCGTaGCATGGCCGAAGCGGAAGG +
Preference number: 4 (lower is better)
Translates to: NAAITFIHPCLRVTTTWYPAGGS*HGRSGR
Trigger: CCTTCCGCTTCGGCCATGCCACGATCCACCCGCTGG...GTACCATGTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000446278.5
CDS-3UTR CCA 90 bp AATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACATGGTACAGGTCGGGGTGCTCCTaGAAGCTGGCGTCCAGCCTC +
Preference number: 4 (lower is better)
Translates to: NAAITFIHPCLRVTTTWYRSGCS*KLASSL
Trigger: GAGGCTGGACGCCAGCTTCCAGGAGCACCCCGACCT...GTACCATGTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000446278.5
CDS-3UTR CCA 90 bp AATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACATGGTACGGGCTGAAGAAAGCCTaGTGCAGCCACAGCCCGGGC +
Preference number: 4 (lower is better)
Translates to: NAAITFIHPCLRVTTTWYGLKKA*CSHSPG
Trigger: GCCCGGGCTGTGGCTGCACCAGGCTTTCTTCAGCCC...GTACCATGTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000446278.5
CDS-3UTR CCA 90 bp TGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACATGGTACTAGGGCTGAAGAAAGCCTaGTGCAGCCACAGCCCGGGC +
Preference number: 4 (lower is better)
Translates to: CSYNIYSSMPESNYDMVLGLKKA*CSHSPG
Trigger: GCCCGGGCTGTGGCTGCACCAGGCTTTCTTCAGCCC...TAGTACCATGTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000446278.5
ENST00000469607.3
CDS-3UTR CCA 90 bp CTGTGCTTCCAGCCGATCCTCAGATTAAGTGGAAGCAAACGCCTGAAAGTGAGCCCAAGGTGCTGGAATTaGACAGCACAAAGAGCCTTT +
Preference number: 4 (lower is better)
Translates to: LCFQPILRLSGSKRLKVSPRCWN*TAQRAF
Trigger: AAAGGCTCTTTGTGCTGTCCAATTCCAGCACCTTGG...GCTCACTTTCAGGCGTTTGCTTCCACTTAATCTGAGGATCGGCTGGAAGCACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422464.5
ENST00000625793.2
CDS-3UTR CCA 90 bp CAGACAAATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACACGCTCCTGCTGGCGATaGCTGTGCTCAGGTCAGCGG +
Preference number: 4 (lower is better)
Translates to: QTNAAITFIHPCLRVTTTRSCWR*LCSGQR
Trigger: CCGCTGACCTGAGCACAGCCATCGCCAGCAGGAGCG...TGTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATTTGTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000446278.5
CDS-3UTR CCA 90 bp CAGACAAATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACACGGCCACGCTCCTGCTaGCGATGGCTGTGCTCAGGT +
Preference number: 4 (lower is better)
Translates to: QTNAAITFIHPCLRVTTTRPRSC*RWLCSG
Trigger: ACCTGAGCACAGCCATCGCCAGCAGGAGCGTGGCCG...TGTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATTTGTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000446278.5
CDS-3UTR CCA 90 bp ACAAATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACATGGCGGCCACGCTCCTGCTaGCGATGGCTGTGCTCAGGT +
Preference number: 4 (lower is better)
Translates to: TNAAITFIHPCLRVTTTWRPRSC*RWLCSG
Trigger: ACCTGAGCACAGCCATCGCCAGCAGGAGCGTGGCCG...CCATGTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000446278.5
CDS-3UTR CCA 90 bp GAATCTCTGGAGGATGAGACAAGTCACTTTGCCTTGTTGGTCCTTAAGGCTCCAGCATCCGTGAAGACGTaGCTGTTCTCCCACCAAAAC +
Preference number: 4 (lower is better)
Translates to: ESLEDETSHFALLVLKAPASVKT*LFSHQN
Trigger: GTTTTGGTGGGAGAACAGCCACGTCTTCACGGATGC...TGGAGCCTTAAGGACCAACAAGGCAAAGTGACTTGTCTCATCCTCCAGAGATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329066.9
ENST00000422464.5
CDS-3UTR CCA 90 bp ACTAGATTTACCCGTGTTGGGAAAACAGTCGTCCTGCTGATTTCGGATTTGCCTGGGAATTTGCCGACTTaGAAGGCATCCATGGGCACC +
Preference number: 4 (lower is better)
Translates to: TRFTRVGKTVVLLISDLPGNLPT*KASMGT
Trigger: GGTGCCCATGGATGCCTTCCAAGTCGGCAAATTCCC...AGGCAAATCCGAAATCAGCAGGACGACTGTTTTCCCAACACGGGTAAATCTAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000469607.3
CDS-3UTR CCA 90 bp CTACGACATGGTACTAGATTTACCCGTGTTGGGAAAACAGTCGTCCTGCTGATTGGGAATTTGCCGACTTaGAAGGCATCCATGGGCACC +
Preference number: 4 (lower is better)
Translates to: LRHGTRFTRVGKTVVLLIGNLPT*KASMGT
Trigger: GGTGCCCATGGATGCCTTCCAAGTCGGCAAATTCCC...AATCAGCAGGACGACTGTTTTCCCAACACGGGTAAATCTAGTACCATGTCGTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000469607.3
CDS-3UTR CCA 90 bp TGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACATGGTACTAAGCTGCTCCCGGCCTTaGAGCTCATACCCGTGCCGG +
Preference number: 4 (lower is better)
Translates to: CSYNIYSSMPESNYDMVLSCSRP*SSYPCR
Trigger: CCGGCACGGGTATGAGCTCCAAGGCCGGGAGCAGCT...TAGTACCATGTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000446278.5
ENST00000469607.3
CDS-3UTR CCA 90 bp GAATCTCTGGAGGATGAGACAAGTCACTTTGCCTTGTTGGTCCTTAAGGCTCCAAAATCCCATCCTTCCTaGGTGCAAGTGAGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: ESLEDETSHFALLVLKAPKSHPS*VQVSCS
Trigger: GGAGCAGCTCACTTGCACCCAGGAAGGATGGGATTT...TGGAGCCTTAAGGACCAACAAGGCAAAGTGACTTGTCTCATCCTCCAGAGATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329066.9
ENST00000422464.5
CDS-3UTR CCA 90 bp AAAGAGTCGTACGGTGATTTTGGGAACATGAAGCTGTTCTGCAGTGTCCTGCCAAAATCCCATCCTTCCTaGGTGCAAGTGAGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: KESYGDFGNMKLFCSVLPKSHPS*VQVSCS
Trigger: GGAGCAGCTCACTTGCACCCAGGAAGGATGGGATTT...TGGCAGGACACTGCAGAACAGCTTCATGTTCCCAAAATCACCGTACGACTCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000469607.3
CDS-3UTR CCA 90 bp TCATCCATGCCTGAGAGTAACTACGACATGGTACTAGATTTACCCGTGTTGGGAACTGGAAGCCGCCTTTaGTGTTTCTGCACCTCGCAG +
Preference number: 4 (lower is better)
Translates to: SSMPESNYDMVLDLPVLGTGSRL*CFCTSQ
Trigger: CTGCGAGGTGCAGAAACACCAAAGGCGGCTTCCAGT...TCCCAACACGGGTAAATCTAGTACCATGTCGTAGTTACTCTCAGGCATGGATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000382201.7
CDS-3UTR CCA 90 bp TATTCATCCATGCCTGAGAGTAACTACGACATGGTACTAGATTTACCCGTGTTGGAGGTCCCTACGGCCTaGTGCTTTCCGCATCTCAGC +
Preference number: 4 (lower is better)
Translates to: YSSMPESNYDMVLDLPVLEVPTA*CFPHLS
Trigger: GCTGAGATGCGGAAAGCACCAGGCCGTAGGGACCTC...CAACACGGGTAAATCTAGTACCATGTCGTAGTTACTCTCAGGCATGGATGAATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000469607.3
CDS-3UTR CCA 90 bp TTTGGAAAAGAGTCGTACGGTGATTTTGGGAACATGAAGCTGTTCTGCAGTGTCGATGGGCAGGGGGTGTaGAAAAACCAGTGCTGGAGG +
Preference number: 4 (lower is better)
Translates to: FGKESYGDFGNMKLFCSVDGQGV*KNQCWR
Trigger: CCTCCAGCACTGGTTTTTCCACACCCCCTGCCCATC...GACACTGCAGAACAGCTTCATGTTCCCAAAATCACCGTACGACTCTTTTCCAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000329066.9
ENST00000422464.5
CDS-3UTR CCA 90 bp GTGTTTGGAAAAGAGTCGTACGGTGATTTTGGGAACATGAAGCTGTTCTGCAGTTTCCTCCGGGATCACTaGGCTGTGTTCCCCGTGAGT +
Preference number: 4 (lower is better)
Translates to: VFGKESYGDFGNMKLFCSFLRDH*AVFPVS
Trigger: ACTCACGGGGAACACAGCCCAGTGATCCCGGAGGAA...ACTGCAGAACAGCTTCATGTTCCCAAAATCACCGTACGACTCTTTTCCAAACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000329066.9
ENST00000422464.5
CDS-3UTR CCA 90 bp GAGGCTCATGTGTTGGTGAATCTCTGGAGGATGAGACAAGTCACTTTGCCTTGTTTTTGGTTCCATGCGTaGGAGCCAGGTGCAAAGACG +
Preference number: 4 (lower is better)
Translates to: EAHVLVNLWRMRQVTLPCFWFHA*EPGAKT
Trigger: CGTCTTTGCACCTGGCTCCCACGCATGGAACCAAAA...ACAAGGCAAAGTGACTTGTCTCATCCTCCAGAGATTCACCAACACATGAGCCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000422464.5
3UTR CAA 72 bp GAATCTCTGGAGGATGAGACAAGTCACTTTGCCTTGTaGGTCCTTAAGGCTCCAGCCTCTCCCTCAGAATCA +
Preference number: 4 (lower is better)
Translates to: ESLEDETSHFAL*VLKAPASPSES
Trigger: TGATTCTGAGGGAGAGGCTGGAGCCTTAAGGACCAACAAGGCAAAGTGACTTGTCTCATCCTCCAGAGATTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329066.9
ENST00000422464.5
3UTR CAA 72 bp CTGAAGCAAAATGTTCATAGCCCTCCTGTGCCACTGTaGTCATTCGTGGGTGAGATCATTCAGTGCTGCCTC +
Preference number: 4 (lower is better)
Translates to: LKQNVHSPPVPL*SFVGEIIQCCL
Trigger: GAGGCAGCACTGAATGATCTCACCCACGAATGACAACAGTGGCACAGGAGGGCTATGAACATTTTGCTTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329066.9
ENST00000422464.5
3UTR CAA 72 bp CGTCTGAATTCTGACTGCTCCAGTAACAGCACACACTaGATACAAGACAGAAGGGCCTGGACAGGAGCTCTT +
Preference number: 4 (lower is better)
Translates to: RLNSDCSSNSTH*IQDRRAWTGAL
Trigger: AAGAGCTCCTGTCCAGGCCCTTCTGTCTTGTATCAAGTGTGTGCTGTTACTGGAGCAGTCAGAATTCAGACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422464.5
CDS-3UTR TCA 90 bp GGTACTAGATTTACCCGTGTTGGGAAAACAGTCGTCCTGCTGATTTCGGATTTGCTTTCCCTCTCGAGATaGAGGGGAAGAAGGCTTCTG +
Preference number: 4 (lower is better)
Translates to: GTRFTRVGKTVVLLISDLLSLSR*RGRRLL
Trigger: CAGAAGCCTTCTTCCCCTTCATCTCGAGAGGGAAAG...CAAATCCGAAATCAGCAGGACGACTGTTTTCCCAACACGGGTAAATCTAGTACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
CDS-3UTR TCA 90 bp TCACTGCTGCCGGCTGAGGCCCTGGTCTTGAGGTTGTTAAAATGTAAACTTAGGGGATTCCTCTTTTCTTaGGGTTTCTCTGCATCGTGG +
Preference number: 4 (lower is better)
Translates to: SLLPAEALVLRLLKCKLRGFLFS*GFSASW
Trigger: CCACGATGCAGAGAAACCTCAAGAAAAGAGGAATCC...CCTAAGTTTACATTTTAACAACCTCAAGACCAGGGCCTCAGCCGGCAGCAGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000382269.7
ENST00000539820.5
ENST00000617910.3
ENST00000629774.2
CDS-3UTR TCA 90 bp CCTTCCTCTCCTGTGCTTCCAGCCGATCCTCAGATTAAGTGGAAGCAAACGCCTATCCGTTGGATGCTGTaGTTGTTGAGTTTTCAGGTT +
Preference number: 4 (lower is better)
Translates to: PSSPVLPADPQIKWKQTPIRWML*LLSFQV
Trigger: AACCTGAAAACTCAACAATCACAGCATCCAACGGAT...AGGCGTTTGCTTCCACTTAATCTGAGGATCGGCTGGAAGCACAGGAGAGGAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422464.5
ENST00000625793.2
CDS-3UTR TCA 90 bp GAGACAAGTCACTTTGCCTTGTTGGTCCTTAAGGCTCCAGCCTCTCCCTCAGAACAGACATGTTTGCAATaGTGCTCAGCAGATCTTCTG +
Preference number: 4 (lower is better)
Translates to: ETSHFALLVLKAPASPSEQTCLQ*CSADLL
Trigger: CAGAAGATCTGCTGAGCATCATTGCAAACATGTCTG...TTCTGAGGGAGAGGCTGGAGCCTTAAGGACCAACAAGGCAAAGTGACTTGTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329066.9
ENST00000422464.5
CDS-3UTR TCA 90 bp AAAGAGTCGTACGGTGATTTTGGGAACATGAAGCTGTTCTGCAGTGTCCTGCCATGTTGCAAGCTCCTGTaGTGGGCCTGTATTTGTTCG +
Preference number: 4 (lower is better)
Translates to: KESYGDFGNMKLFCSVLPCCKLL*WACICS
Trigger: CGAACAAATACAGGCCCATCACAGGAGCTTGCAACA...TGGCAGGACACTGCAGAACAGCTTCATGTTCCCAAAATCACCGTACGACTCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR TCA 90 bp GAATCTCTGGAGGATGAGACAAGTCACTTTGCCTTGTTGGTCCTTAAGGCTCCATGTTGCAAGCTCCTGTaGTGGGCCTGTATTTGTTCG +
Preference number: 4 (lower is better)
Translates to: ESLEDETSHFALLVLKAPCCKLL*WACICS
Trigger: CGAACAAATACAGGCCCATCACAGGAGCTTGCAACA...TGGAGCCTTAAGGACCAACAAGGCAAAGTGACTTGTCTCATCCTCCAGAGATTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329066.9
ENST00000422464.5
CDS-3UTR TCA 90 bp TCTTCCCAGGAGAAGAGGGAAGCCAGATGTAGGCCCTGTGGACACCTGGTGATGTGTGACAACCTCATTTaGAACTTGAATGACATGTCT +
Preference number: 4 (lower is better)
Translates to: SSQEKREARCRPCGHLVMCDNLI*NLNDMS
Trigger: AGACATGTCATTCAAGTTTCAAATGAGGTTGTCACA...CATCACCAGGTGTCCACAGGGCCTACATCTGGCTTCCCTCTTCTCCTGGGAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329066.9
ENST00000422464.5
CDS-3UTR TCA 90 bp GTGCTTCCAGCCGATCCTCAGATTAAGTGGAAGCAAACGCCTGAAAGTGAGCCCAGCGGTCATCATCTGTaGCAACCTCATTTGAAACTT +
Preference number: 4 (lower is better)
Translates to: VLPADPQIKWKQTPESEPSGHHL*QPHLKL
Trigger: AAGTTTCAAATGAGGTTGTCACAGATGATGACCGCT...GGGCTCACTTTCAGGCGTTTGCTTCCACTTAATCTGAGGATCGGCTGGAAGCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422464.5
ENST00000625793.2
CDS-3UTR TCA 90 bp TATTCATCCATGCCTGAGAGTAACTACGACATGGTACTAGATTTACCCGTGTTGTGGTGCTCTGTGGTGTaGACGCGATGTCGTGGTCGA +
Preference number: 4 (lower is better)
Translates to: YSSMPESNYDMVLDLPVLWCSVV*TRCRGR
Trigger: TCGACCACGACATCGCGTTCACACCACAGAGCACCA...CAACACGGGTAAATCTAGTACCATGTCGTAGTTACTCTCAGGCATGGATGAATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR TCA 90 bp GTGTTTGGAAAAGAGTCGTACGGTGATTTTGGGAACATGAAGCTGTTCTGCAGTGTAATGTCCATGGGCTaGAGAAAGCCTGGTGCAGCC +
Preference number: 4 (lower is better)
Translates to: VFGKESYGDFGNMKLFCSVMSMG*RKPGAA
Trigger: GGCTGCACCAGGCTTTCTTCAGCCCATGGACATTAC...ACTGCAGAACAGCTTCATGTTCCCAAAATCACCGTACGACTCTTTTCCAAACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000469607.3
CDS-3UTR TCA 90 bp AATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACATGGTACCTTCCTGGGTGCAAGTaGGCTGCTCCCGGCCTTGGA +
Preference number: 4 (lower is better)
Translates to: NAAITFIHPCLRVTTTWYLPGCK*AAPGLG
Trigger: TCCAAGGCCGGGAGCAGCTCACTTGCACCCAGGAAG...GTACCATGTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000446278.5
CDS-3UTR TCA 90 bp GGCCAGACAAATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGAAATCACCGTCGAGGTaGGACCTGCGAAGCCTCCGA +
Preference number: 4 (lower is better)
Translates to: GQTNAAITFIHPCLRVTTKSPSR*DLRSLR
Trigger: TCGGAGGCTTCGCAGGTCTCACCTCGACGGTGATTT...CGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATTTGTCTGGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000446278.5
CDS-3UTR TCA 90 bp AATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACATGGTACGCTCTCGGCAGCCTGTaGGTATCCCGGCCTTCCATC +
Preference number: 4 (lower is better)
Translates to: NAAITFIHPCLRVTTTWYALGSL*VSRPSI
Trigger: GATGGAAGGCCGGGATACTCACAGGCTGCCGAGAGC...GTACCATGTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000446278.5
CDS-3UTR TCA 90 bp GGCCAGACAAATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGGAGTCAGGGAGGGAGTaGGTTTCCTCCGGGATCACT +
Preference number: 4 (lower is better)
Translates to: GQTNAAITFIHPCLRVTTESGRE*VSSGIT
Trigger: AGTGATCCCGGAGGAAACTCACTCCCTCCCTGACTC...CGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATTTGTCTGGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329066.9
ENST00000422464.5
CDS-3UTR TCA 90 bp GAGGCTCATGTGTTGGTGAATCTCTGGAGGATGAGACAAGTCACTTTGCCTTGTGTTGTCATTCGTGGGTaGGATCATTCAGTGCTGCCT +
Preference number: 4 (lower is better)
Translates to: EAHVLVNLWRMRQVTLPCVVIRG*DHSVLP
Trigger: AGGCAGCACTGAATGATCTCACCCACGAATGACAAC...ACAAGGCAAAGTGACTTGTCTCATCCTCCAGAGATTCACCAACACATGAGCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329066.9
ENST00000422464.5
CDS-3UTR TCA 90 bp AGCAGGAACTCACTGCTGCCGGCTGAGGCCCTGGTCTTGAGGTTGTTAAAATGTATTGGAGAAAAGCTTTaGCTGGCTTCAGTTTCGCAT +
Preference number: 4 (lower is better)
Translates to: SRNSLLPAEALVLRLLKCIGEKL*LASVSH
Trigger: ATGCGAAACTGAAGCCAGTCAAAGCTTTTCTCCAAT...ACATTTTAACAACCTCAAGACCAGGGCCTCAGCCGGCAGCAGTGAGTTCCTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382269.7
ENST00000539820.5
ENST00000617910.3
ENST00000629774.2
CDS-3UTR GCA 90 bp TCACTGCTGCCGGCTGAGGCCCTGGTCTTGAGGTTGTTAAAATGTAAACTTAGGTGTTTCCATTATCTCTaGTGCTCGGGCAATCACTCC +
Preference number: 4 (lower is better)
Translates to: SLLPAEALVLRLLKCKLRCFHYL*CSGNHS
Trigger: GGAGTGATTGCCCGAGCAGCAGAGATAATGGAAACA...CCTAAGTTTACATTTTAACAACCTCAAGACCAGGGCCTCAGCCGGCAGCAGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382269.7
ENST00000539820.5
ENST00000617910.3
ENST00000629774.2
CDS-3UTR GCA 90 bp AAATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACATGGTAGTCCAGTTCCGCAGCTaGCTCTCTAGGGCCGGGGAG +
Preference number: 4 (lower is better)
Translates to: KCSYNIYSSMPESNYDMVVQFRS*LSRAGE
Trigger: CTCCCCGGCCCTAGAGAGGCAGCTGCGGAACTGGAC...TACCATGTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR GCA 90 bp AGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACATGGTACTAGATCCACAGCGTGTGCAGTaGCGTCAGGGAGGGGACCTC +
Preference number: 4 (lower is better)
Translates to: SYNIYSSMPESNYDMVLDPQRVQ*RQGGDL
Trigger: GAGGTCCCCTCCCTGACGGCACTGCACACGCTGTGG...ATCTAGTACCATGTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR GCA 90 bp ACAAATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACATGGTGCTGGCGATGGCTGTaGTCAGGTCAGCGGGGGTCT +
Preference number: 4 (lower is better)
Translates to: TNAAITFIHPCLRVTTTWCWRWL*SGQRGS
Trigger: AGACCCCCGCTGACCTGAGCACAGCCATCGCCAGCA...CCATGTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATTTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000446278.5
CDS-3UTR GCA 90 bp TGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACATGGTACTATGCTGGCGATGGCTGTaGTCAGGTCAGCGGGGGTCT +
Preference number: 4 (lower is better)
Translates to: CSYNIYSSMPESNYDMVLCWRWL*SGQRGS
Trigger: AGACCCCCGCTGACCTGAGCACAGCCATCGCCAGCA...TAGTACCATGTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000446278.5
ENST00000469607.3
CDS-3UTR GCA 90 bp GACAAATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACATGTGTCGGCCACGCTCCTaGTGGCGATGGCTGTGCTCA +
Preference number: 4 (lower is better)
Translates to: DKCSYNIYSSMPESNYDMCRPRS*WRWLCS
Trigger: TGAGCACAGCCATCGCCAGCAGGAGCGTGGCCGACA...CATGTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATTTGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000446278.5
CDS-3UTR GCA 90 bp AATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACATGGTACTGTCGGCCACGCTCCTaGTGGCGATGGCTGTGCTCA +
Preference number: 4 (lower is better)
Translates to: NAAITFIHPCLRVTTTWYCRPRS*WRWLCS
Trigger: TGAGCACAGCCATCGCCAGCAGGAGCGTGGCCGACA...GTACCATGTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000446278.5
CDS-3UTR GCA 90 bp ACTAGATTTACCCGTGTTGGGAAAACAGTCGTCCTGCTGATTTCGGATTTGCCTCGCAGAGCCTTCATCTaGTTCCCAATGAGACAGGCA +
Preference number: 4 (lower is better)
Translates to: TRFTRVGKTVVLLISDLPRRAFI*FPMRQA
Trigger: TGCCTGTCTCATTGGGAAGCAGATGAAGGCTCTGCG...AGGCAAATCCGAAATCAGCAGGACGACTGTTTTCCCAACACGGGTAAATCTAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000469607.3
CDS-3UTR GCA 90 bp CCTGAGAGTAACTACGACATGGTACTAGATTTACCCGTGTTGGGAAAACAGTCGCGCAGAGCCTTCATCTaGTTCCCAATGAGACAGGCA +
Preference number: 4 (lower is better)
Translates to: PESNYDMVLDLPVLGKQSRRAFI*FPMRQA
Trigger: TGCCTGTCTCATTGGGAAGCAGATGAAGGCTCTGCG...CGACTGTTTTCCCAACACGGGTAAATCTAGTACCATGTCGTAGTTACTCTCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000469607.3
CDS-3UTR GCA 90 bp CCTGTGTTTGGAAAAGAGTCGTACGGTGATTTTGGGAACATGAAGCTGTTCTGCCGCAGAGCCTTCATCTaGTTCCCAATGAGACAGGCA +
Preference number: 4 (lower is better)
Translates to: PVFGKESYGDFGNMKLFCRRAFI*FPMRQA
Trigger: TGCCTGTCTCATTGGGAAGCAGATGAAGGCTCTGCG...GCAGAACAGCTTCATGTTCCCAAAATCACCGTACGACTCTTTTCCAAACACAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000469607.3
CDS-3UTR GCA 90 bp GAGAGTAACTACGACATGGTACTAGATTTACCCGTGTTGGGAAAACAGTCGTCCCGCAGAGCCTTCATCTaGTTCCCAATGAGACAGGCA +
Preference number: 4 (lower is better)
Translates to: ESNYDMVLDLPVLGKQSSRRAFI*FPMRQA
Trigger: TGCCTGTCTCATTGGGAAGCAGATGAAGGCTCTGCG...GGACGACTGTTTTCCCAACACGGGTAAATCTAGTACCATGTCGTAGTTACTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000469607.3
CDS-3UTR GCA 90 bp ACGCCTGAAAGTGAGCCCTTAGTTTTGGAACCGGTTTGTACAAATGGAAGGCATCGCAGAGCCTTCATCTaGTTCCCAATGAGACAGGCA +
Preference number: 4 (lower is better)
Translates to: TPESEPLVLEPVCTNGRHRRAFI*FPMRQA
Trigger: TGCCTGTCTCATTGGGAAGCAGATGAAGGCTCTGCG...ATGCCTTCCATTTGTACAAACCGGTTCCAAAACTAAGGGCTCACTTTCAGGCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422464.5
ENST00000625793.2
CDS-3UTR GCA 90 bp TATTCATCCATGCCTGAGAGTAACTACGACATGGTACTAGATTTACCCGTGTTGCAGCTCACGCCTCTGTaGATCCGTGAAGACGTGGCT +
Preference number: 4 (lower is better)
Translates to: YSSMPESNYDMVLDLPVLQLTPL*IREDVA
Trigger: AGCCACGTCTTCACGGATGCACAGAGGCGTGAGCTG...CAACACGGGTAAATCTAGTACCATGTCGTAGTTACTCTCAGGCATGGATGAATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000469607.3
CDS-3UTR GCA 90 bp CCAGACAAATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACACCCGAGACAGGGAGTaGTTCTCCAGCTCACGCCTC +
Preference number: 4 (lower is better)
Translates to: PDKCSYNIYSSMPESNYDTRDRE*FSSSRL
Trigger: GAGGCGTGAGCTGGAGAAGCACTCCCTGTCTCGGGT...GTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATTTGTCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000446278.5
CDS-3UTR GCA 90 bp AGTAACTACGACATGGTACTAGATTTACCCGTGTTGGGAAAACAGTCGTCCTGCCCAGACTCCTCACAGTaGACAAAGTCCCCATTCTCC +
Preference number: 4 (lower is better)
Translates to: SNYDMVLDLPVLGKQSSCPDSSQ*TKSPFS
Trigger: GGAGAATGGGGACTTTGTGCACTGTGAGGAGTCTGG...GCAGGACGACTGTTTTCCCAACACGGGTAAATCTAGTACCATGTCGTAGTTACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000469607.3
CDS-3UTR GCA 90 bp GAAAGTGAGCCCTTAGTTTTGGAACCGGTTTGTACAAATGGAAGGCATCTTCATTGGAGCTCATACCCGTaGCGGCAGGAATACACCAGC +
Preference number: 4 (lower is better)
Translates to: ESEPLVLEPVCTNGRHLHWSSYP*RQEYTS
Trigger: GCTGGTGTATTCCTGCCGGCACGGGTATGAGCTCCA...ATGAAGATGCCTTCCATTTGTACAAACCGGTTCCAAAACTAAGGGCTCACTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422464.5
ENST00000625793.2
CDS-3UTR GCA 90 bp CCAGACAAATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACTGGGTGCAAGTGAGCTaGTCCCGGCCTTGGAGCTCA +
Preference number: 4 (lower is better)
Translates to: PDKCSYNIYSSMPESNYDWVQVS*SRPWSS
Trigger: TGAGCTCCAAGGCCGGGAGCAGCTCACTTGCACCCA...GTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATTTGTCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000446278.5
CDS-3UTR GCA 90 bp CCAGACAAATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACGTCCCTACGGCCTGGTaGTTTCCGCATCTCAGCTCG +
Preference number: 4 (lower is better)
Translates to: PDKCSYNIYSSMPESNYDVPTAW*FPHLSS
Trigger: CGAGCTGAGATGCGGAAAGCACCAGGCCGTAGGGAC...GTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATTTGTCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR GCA 90 bp AGGCCAGACAAATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACAGTGTCCTGCCACTTTaGCCTCAGAGGGCTCTCGGC +
Preference number: 4 (lower is better)
Translates to: RPDKCSYNIYSSMPESNYSVLPL*PQRALG
Trigger: GCCGAGAGCCCTCTGAGGGCAAAGTGGCAGGACACT...GTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATTTGTCTGGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR GCA 90 bp CCAGACAAATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACAGTGTCCTGCCACTTTaGCCTCAGAGGGCTCTCGGC +
Preference number: 4 (lower is better)
Translates to: PDKCSYNIYSSMPESNYDSVLPL*PQRALG
Trigger: GCCGAGAGCCCTCTGAGGGCAAAGTGGCAGGACACT...GTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATTTGTCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000446278.5
CDS-3UTR GCA 90 bp GATTTGCCTGTGTTTGGAAAAGAGTCGTACGGTGATTTTGGGAACATGAAGCTGTGTTCTGCAGTGTCCTaGCACTTTGCCCTCAGAGGG +
Preference number: 4 (lower is better)
Translates to: DLPVFGKESYGDFGNMKLCSAVS*HFALRG
Trigger: CCCTCTGAGGGCAAAGTGGCAGGACACTGCAGAACA...CAGCTTCATGTTCCCAAAATCACCGTACGACTCTTTTCCAAACACAGGCAAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000469607.3
CDS-3UTR GCA 90 bp CAGACAAATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACACGGTGCCCCCGAGACTaGCTTGTTGAGTCAGGGAGG +
Preference number: 4 (lower is better)
Translates to: QTNAAITFIHPCLRVTTTRCPRD*LVESGR
Trigger: CCTCCCTGACTCAACAAGGCAGTCTCGGGGGCACCG...TGTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATTTGTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329066.9
ENST00000422464.5
CDS-3UTR GCA 90 bp ACTGTTCTGCTCTCTGCTTCTCTCAGTTCAAAAGTCAGACTTACACAAGTGAGTGCCTCCCGGAGTCTTTaGAGAGGGGAGGCTGGAAAT +
Preference number: 4 (lower is better)
Translates to: TVLLSASLSSKVRLTQVSASRSL*RGEAGN
Trigger: ATTTCCAGCCTCCCCTCTGCAAAGACTCCGGGAGGC...ACTCACTTGTGTAAGTCTGACTTTTGAACTGAGAGAAGCAGAGAGCAGAACAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422464.5
ENST00000625793.2
CDS-3UTR GCA 90 bp AATCTCTGGAGGATGAGACAAGTCACTTTGCCTTGTTGGTCCTTAAGGCTCCAGGTGCAAAGACGAATGTaGTCTCAGCAGAACGACCCT +
Preference number: 4 (lower is better)
Translates to: NLWRMRQVTLPCWSLRLQVQRRM*SQQNDP
Trigger: AGGGTCGTTCTGCTGAGAGCACATTCGTCTTTGCAC...CTGGAGCCTTAAGGACCAACAAGGCAAAGTGACTTGTCTCATCCTCCAGAGATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422464.5
CDS-3UTR GCA 90 bp AGACAGGAGGATTGCAAGAGTGGTGTTTCCAGGGTTCACAAAATAAAGATGTGTTCACAGAGTGGGATCTaGAATCCGCAGGCAGGGTCC +
Preference number: 4 (lower is better)
Translates to: RQEDCKSGVSRVHKIKMCSQSGI*NPQAGS
Trigger: GGACCCTGCCTGCGGATTGCAGATCCCACTCTGTGA...ACACATCTTTATTTTGTGAACCCTGGAAACACCACTCTTGCAATCCTCCTGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422464.5
CDS-3UTR CCA 90 bp CAGACAAATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACAGCATCGTGGCGTACATaGCGGTGTCCACCAGGCGCT +
Preference number: 4 (lower is better)
Translates to: QTNAAITFIHPCLRVTTTASWRT*RCPPGA
Trigger: AGCGCCTGGTGGACACCGCCATGTACGCCACGATGC...TGTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATTTGTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
CDS-3UTR CCA 90 bp TTTGGAAAAGAGTCGTACGGTGATTTTGGGAACATGAAGCTGTTCTGCAGTGTCGGTTTCTCTGCATCGTaGCGTACATGGCGGTGTCCA +
Preference number: 4 (lower is better)
Translates to: FGKESYGDFGNMKLFCSVGFSAS*RTWRCP
Trigger: TGGACACCGCCATGTACGCCACGATGCAGAGAAACC...GACACTGCAGAACAGCTTCATGTTCCCAAAATCACCGTACGACTCTTTTCCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
CDS-3UTR CCA 90 bp AAAGCTTTGACTGGCTTCAGTTTCGCATTATTTGGTCTGTCCTGCTGGAAGGTTGGTTTCTCTGCATCGTaGCGTACATGGCGGTGTCCA +
Preference number: 4 (lower is better)
Translates to: KALTGFSFALFGLSCWKVGFSAS*RTWRCP
Trigger: TGGACACCGCCATGTACGCCACGATGCAGAGAAACC...AACCTTCCAGCAGGACAGACCAAATAATGCGAAACTGAAGCCAGTCAAAGCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382269.7
ENST00000539820.5
ENST00000617910.3
ENST00000629774.2
CDS-3UTR CCA 90 bp AAAGCTTTGACTGGCTTCAGTTTCGCATTATTTGGTCTGTCCTGCTGGAAGGTTCGCCAGGCAAGTGTTTaGGCATTTTGGGGGCAGCAT +
Preference number: 4 (lower is better)
Translates to: KALTGFSFALFGLSCWKVRQASV*AFWGQH
Trigger: ATGCTGCCCCCAAAATGCCCAAACACTTGCCTGGCG...AACCTTCCAGCAGGACAGACCAAATAATGCGAAACTGAAGCCAGTCAAAGCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000382269.7
ENST00000539820.5
ENST00000617910.3
ENST00000629774.2
CDS-3UTR CCA 90 bp AAGCAAACGCCTGAAAGTGAGCCCTTAGTTTTGGAACCGGTTTGTACAAATGGACGCCAGGCAAGTGTTTaGGCATTTTGGGGGCAGCAT +
Preference number: 4 (lower is better)
Translates to: KQTPESEPLVLEPVCTNGRQASV*AFWGQH
Trigger: ATGCTGCCCCCAAAATGCCCAAACACTTGCCTGGCG...TCCATTTGTACAAACCGGTTCCAAAACTAAGGGCTCACTTTCAGGCGTTTGCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000422464.5
ENST00000625793.2
CDS-3UTR CCA 90 bp GGCCAGACAAATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGGCGCCCCATCTGGGGTaGTCTCTGTTGTTGCAAGCT +
Preference number: 4 (lower is better)
Translates to: GQTNAAITFIHPCLRVTTAPHLG*SLLLQA
Trigger: AGCTTGCAACAACAGAGACCACCCCAGATGGGGCGC...CGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATTTGTCTGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR CCA 90 bp AAAGCCCCAGAAGGAACAAATCAGGCAATGTTTACAAGAAAAGGCCAGACAAATTGGAGGCGCCCCATCTaGGGTGGTCTCTGTTGTTGC +
Preference number: 4 (lower is better)
Translates to: KAPEGTNQAMFTRKGQTNWRRPI*GGLCCC
Trigger: GCAACAACAGAGACCACCCCAGATGGGGCGCCTCCA...ATTTGTCTGGCCTTTTCTTGTAAACATTGCCTGATTTGTTCCTTCTGGGGCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR CCA 90 bp AGGCCAGACAAATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACTGGAGGCGCCCCATCTaGGGTGGTCTCTGTTGTTGC +
Preference number: 4 (lower is better)
Translates to: RPDKCSYNIYSSMPESNYWRRPI*GGLCCC
Trigger: GCAACAACAGAGACCACCCCAGATGGGGCGCCTCCA...GTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATTTGTCTGGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR CCA 90 bp CCAGACAAATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACCCGGACCGGGGGCAGTaGGAACCCGTTGTACAAGAA +
Preference number: 4 (lower is better)
Translates to: PDKCSYNIYSSMPESNYDPDRGQ*EPVVQE
Trigger: TTCTTGTACAACGGGTTCCCACTGCCCCCGGTCCGG...GTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATTTGTCTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR CCA 90 bp GTGTCTGAGTTTGCTTTCAATGCCGAAGGACTCCTAACTATTGCCTTGCGTGAGGTGAACGCGATGTCGTaGTCGATGTATTGTCCCCAT +
Preference number: 4 (lower is better)
Translates to: VSEFAFNAEGLLTIALREVNAMS*SMYCPH
Trigger: ATGGGGACAATACATCGACCACGACATCGCGTTCAC...CTCACGCAAGGCAATAGTTAGGAGTCCTTCGGCATTGAAAGCAAACTCAGACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329066.9
ENST00000422464.5
CDS-3UTR CCA 90 bp CCTGTGTTTGGAAAAGAGTCGTACGGTGATTTTGGGAACATGAAGCTGTTCTGCTTTGCTGGTGCTCTGTaGTGTGAACGCGATGTCGTG +
Preference number: 4 (lower is better)
Translates to: PVFGKESYGDFGNMKLFCFAGAL*CERDVV
Trigger: CACGACATCGCGTTCACACCACAGAGCACCAGCAAA...GCAGAACAGCTTCATGTTCCCAAAATCACCGTACGACTCTTTTCCAAACACAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR CCA 90 bp GAGAGTAACTACGACATGGTACTAGATTTACCCGTGTTGGGAAAACAGTCGTCCTTTGCTGGTGCTCTGTaGTGTGAACGCGATGTCGTG +
Preference number: 4 (lower is better)
Translates to: ESNYDMVLDLPVLGKQSSFAGAL*CERDVV
Trigger: CACGACATCGCGTTCACACCACAGAGCACCAGCAAA...GGACGACTGTTTTCCCAACACGGGTAAATCTAGTACCATGTCGTAGTTACTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR CCA 90 bp CCTTCCTCTCCTGTGCTTCCAGCCGATCCTCAGATTAAGTGGAAGCAAACGCCTGGAAAACATGGGTTTTaGTTCTCACAAGTCATCTGG +
Preference number: 4 (lower is better)
Translates to: PSSPVLPADPQIKWKQTPGKHGF*FSQVIW
Trigger: CCAGATGACTTGTGAGAACCAAAACCCATGTTTTCC...AGGCGTTTGCTTCCACTTAATCTGAGGATCGGCTGGAAGCACAGGAGAGGAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422464.5
ENST00000625793.2
CDS-3UTR CCA 90 bp AAATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACATGGTAGCCGCGGGTTGGCCGTaGACAGGTTCCCAAAGAGCG +
Preference number: 4 (lower is better)
Translates to: KCSYNIYSSMPESNYDMVAAGWP*TGSQRA
Trigger: CGCTCTTTGGGAACCTGTCCACGGCCAACCCGCGGC...TACCATGTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR CCA 90 bp AAATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACATGGTAGCAGCCCTTCGGCACTaGTCCAGTTCCGCAGCTGCC +
Preference number: 4 (lower is better)
Translates to: KCSYNIYSSMPESNYDMVAALRH*SSSAAA
Trigger: GGCAGCTGCGGAACTGGACCAGTGCCGAAGGGCTGC...TACCATGTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR CCA 90 bp CCAGACAAATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACCTCAGGGTGATGATCTaGTGCAGAGCGCCCACGACC +
Preference number: 4 (lower is better)
Translates to: PDKCSYNIYSSMPESNYDLRVMI*CRAPTT
Trigger: GGTCGTGGGCGCTCTGCACCAGATCATCACCCTGAG...GTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATTTGTCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR CCA 90 bp AGACAGGAGGATTGCAAGAGTGGTGTTTCCAGGGTTCACAAAATAAAGATGTGTCTGTGGAGAACACGTTaGACACAGTGGGGTTGGCGG +
Preference number: 4 (lower is better)
Translates to: RQEDCKSGVSRVHKIKMCLWRTR*TQWGWR
Trigger: CCGCCAACCCCACTGTGTCCAACGTGTTCTCCACAG...ACACATCTTTATTTTGTGAACCCTGGAAACACCACTCTTGCAATCCTCCTGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329066.9
ENST00000422464.5
CDS-3UTR CCA 90 bp ACTGTTCTGCTCTCTGCTTCTCTCAGTTCAAAAGTCAGACTTACACAAGTGAGTCTGTGGAGAACACGTTaGACACAGTGGGGTTGGCGG +
Preference number: 4 (lower is better)
Translates to: TVLLSASLSSKVRLTQVSLWRTR*TQWGWR
Trigger: CCGCCAACCCCACTGTGTCCAACGTGTTCTCCACAG...ACTCACTTGTGTAAGTCTGACTTTTGAACTGAGAGAAGCAGAGAGCAGAACAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422464.5
ENST00000625793.2
CDS-3UTR CCA 90 bp GAAAGTGAGCCCTTAGTTTTGGAACCGGTTTGTACAAATGGAAGGCATCTTCATAGCGGAAGGCGGCTGTaGAGAACACGTTGGACACAG +
Preference number: 4 (lower is better)
Translates to: ESEPLVLEPVCTNGRHLHSGRRL*RTRWTQ
Trigger: CTGTGTCCAACGTGTTCTCCACAGCCGCCTTCCGCT...ATGAAGATGCCTTCCATTTGTACAAACCGGTTCCAAAACTAAGGGCTCACTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422464.5
ENST00000625793.2
CDS-3UTR CCA 90 bp GACAAATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACATGCTCCTCACCAGCGGGTaGATCGTGGCATGGCCGAAG +
Preference number: 4 (lower is better)
Translates to: DKCSYNIYSSMPESNYDMLLTSG*IVAWPK
Trigger: CTTCGGCCATGCCACGATCCACCCGCTGGTGAGGAG...CATGTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATTTGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000446278.5
CDS-3UTR CCA 90 bp GTGTTTGGAAAAGAGTCGTACGGTGATTTTGGGAACATGAAGCTGTTCTGCAGTCCTGCACCTGCAGTTTaGCTGGTCTTGCAAGAAGGC +
Preference number: 4 (lower is better)
Translates to: VFGKESYGDFGNMKLFCSPAPAV*LVLQEG
Trigger: GCCTTCTTGCAAGACCAGCCAAACTGCAGGTGCAGG...ACTGCAGAACAGCTTCATGTTCCCAAAATCACCGTACGACTCTTTTCCAAACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000422464.5
CDS-3UTR CCA 90 bp AAGCAAACGCCTGAAAGTGAGCCCTTAGTTTTGGAACCGGTTTGTACAAATGGACCTGCACCTGCAGTTTaGCTGGTCTTGCAAGAAGGC +
Preference number: 4 (lower is better)
Translates to: KQTPESEPLVLEPVCTNGPAPAV*LVLQEG
Trigger: GCCTTCTTGCAAGACCAGCCAAACTGCAGGTGCAGG...TCCATTTGTACAAACCGGTTCCAAAACTAAGGGCTCACTTTCAGGCGTTTGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422464.5
ENST00000625793.2
CDS-3UTR CCA 90 bp CTGAAGCAAAATGTTCATAGCCCTCCTGTGCCACTGTTGTCATTCGTGGGTGAGCCAAGGTGCTGGAATTaGACAGCACAAAGAGCCTTT +
Preference number: 4 (lower is better)
Translates to: LKQNVHSPPVPLLSFVGEPRCWN*TAQRAF
Trigger: AAAGGCTCTTTGTGCTGTCCAATTCCAGCACCTTGG...CTCACCCACGAATGACAACAGTGGCACAGGAGGGCTATGAACATTTTGCTTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329066.9
ENST00000422464.5
CDS-3UTR CCA 90 bp AGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACATGGTACTAGATCGGCCACGCTCCTGCTaGCGATGGCTGTGCTCAGGT +
Preference number: 4 (lower is better)
Translates to: SYNIYSSMPESNYDMVLDRPRSC*RWLCSG
Trigger: ACCTGAGCACAGCCATCGCCAGCAGGAGCGTGGCCG...ATCTAGTACCATGTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000446278.5
ENST00000469607.3
CDS-3UTR CCA 90 bp CCTGTGTTTGGAAAAGAGTCGTACGGTGATTTTGGGAACATGAAGCTGTTCTGCGCATCCGTGAAGACGTaGCTGTTCTCCCACCAAAAC +
Preference number: 4 (lower is better)
Translates to: PVFGKESYGDFGNMKLFCASVKT*LFSHQN
Trigger: GTTTTGGTGGGAGAACAGCCACGTCTTCACGGATGC...GCAGAACAGCTTCATGTTCCCAAAATCACCGTACGACTCTTTTCCAAACACAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000469607.3
CDS-3UTR CCA 90 bp TTTGGAAAAGAGTCGTACGGTGATTTTGGGAACATGAAGCTGTTCTGCAGTGTCTCCGCGCAGAGACACTaGAAGCCGCCTTTGGTGTTT +
Preference number: 4 (lower is better)
Translates to: FGKESYGDFGNMKLFCSVSAQRH*KPPLVF
Trigger: AAACACCAAAGGCGGCTTCCAGTGTCTCTGCGCGGA...GACACTGCAGAACAGCTTCATGTTCCCAAAATCACCGTACGACTCTTTTCCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000382201.7
CDS-3UTR CCA 90 bp CGACATGGTACTAGATTTACCCGTGTTGGGAAAACAGTCGTCCTGCTGATTTCGGTCACTTTGCCTTGTTaGTCCTTAAGGCTCCAGCCT +
Preference number: 4 (lower is better)
Translates to: RHGTRFTRVGKTVVLLISVTLPC*SLRLQP
Trigger: AGGCTGGAGCCTTAAGGACCAACAAGGCAAAGTGAC...CGAAATCAGCAGGACGACTGTTTTCCCAACACGGGTAAATCTAGTACCATGTCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329066.9
ENST00000422464.5
CDS-3UTR CCA 90 bp AAGTTTCTGGCTTCCGGACAAATGCTTGTTTGCAGGAGGCCACAGAGGATCCACGTGTTGGTGAATCTCTaGAGGATGAGACAAGTCACT +
Preference number: 4 (lower is better)
Translates to: KFLASGQMLVCRRPQRIHVLVNL*RMRQVT
Trigger: AGTGACTTGTCTCATCCTCCAGAGATTCACCAACAC...GTGGATCCTCTGTGGCCTCCTGCAAACAAGCATTTGTCCGGAAGCCAGAAACTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422464.5
CDS-3UTR CCA 90 bp CGACATGGTACTAGATTTACCCGTGTTGGGAAAACAGTCGTCCTGCTGATTTCGTGGGACCCAGCACTCTaGAATTCAGCTGCTTCACAT +
Preference number: 4 (lower is better)
Translates to: RHGTRFTRVGKTVVLLISWDPAL*NSAASH
Trigger: ATGTGAAGCAGCTGAATTCCAGAGTGCTGGGTCCCA...CGAAATCAGCAGGACGACTGTTTTCCCAACACGGGTAAATCTAGTACCATGTCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329066.9
ENST00000422464.5
CDS-3UTR CCA 90 bp GAGACAAGTCACTTTGCCTTGTTGGTCCTTAAGGCTCCAGCCTCTCCCTCAGAACACTGTTGTCATTCGTaGGTGAGATCATTCAGTGCT +
Preference number: 4 (lower is better)
Translates to: ETSHFALLVLKAPASPSEHCCHS*VRSFSA
Trigger: AGCACTGAATGATCTCACCCACGAATGACAACAGTG...TTCTGAGGGAGAGGCTGGAGCCTTAAGGACCAACAAGGCAAAGTGACTTGTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329066.9
ENST00000422464.5
CDS-3UTR CCA 90 bp GTGTCTGAGTTTGCTTTCAATGCCGAAGGACTCCTAACTATTGCCTTGCGTGAGCAGAACAGGATGGCCTaGCACCTAGGGAAAACAACA +
Preference number: 4 (lower is better)
Translates to: VSEFAFNAEGLLTIALREQNRMA*HLGKTT
Trigger: TGTTGTTTTCCCTAGGTGCCAGGCCATCCTGTTCTG...CTCACGCAAGGCAATAGTTAGGAGTCCTTCGGCATTGAAAGCAAACTCAGACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329066.9
ENST00000422464.5
CDS-3UTR CCA 90 bp TCACTGCTGCCGGCTGAGGCCCTGGTCTTGAGGTTGTTAAAATGTAAACTTAGGGCCAATGTCATTGTGTaGTCAGCAGAGATTCTCCCA +
Preference number: 4 (lower is better)
Translates to: SLLPAEALVLRLLKCKLRANVIV*SAEILP
Trigger: TGGGAGAATCTCTGCTGACCACACAATGACATTGGC...CCTAAGTTTACATTTTAACAACCTCAAGACCAGGGCCTCAGCCGGCAGCAGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382269.7
ENST00000539820.5
ENST00000617910.3
ENST00000629774.2
CDS-3UTR CCA 90 bp GGGAAGTTTCTGGCTTCCGGACAAATGCTTGTTTGCAGGAGGCCACAGAGGATCACCGGTTTGTACAAATaGAAGGCATCTTCATTCCTC +
Preference number: 4 (lower is better)
Translates to: GKFLASGQMLVCRRPQRITGLYK*KASSFL
Trigger: GAGGAATGAAGATGCCTTCCATTTGTACAAACCGGT...GATCCTCTGTGGCCTCCTGCAAACAAGCATTTGTCCGGAAGCCAGAAACTTCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422464.5
CDS-3UTR CCA 90 bp CTCCTTCCTCTCCTGTGCTTCCAGCCGATCCTCAGATTAAGTGGAAGCAAACGCACCGGTTTGTACAAATaGAAGGCATCTTCATTCCTC +
Preference number: 4 (lower is better)
Translates to: LLPLLCFQPILRLSGSKRTGLYK*KASSFL
Trigger: GAGGAATGAAGATGCCTTCCATTTGTACAAACCGGT...GCGTTTGCTTCCACTTAATCTGAGGATCGGCTGGAAGCACAGGAGAGGAAGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422464.5
ENST00000625793.2
CDS-3UTR CCA 90 bp AGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACATGGTACTAGATGCCCAGGGGACTTGCTaGCACTGCCCTTGCTGTGGC +
Preference number: 4 (lower is better)
Translates to: SYNIYSSMPESNYDMVLDAQGTC*HCPCCG
Trigger: GCCACAGCAAGGGCAGTGCCAGCAAGTCCCCTGGGC...ATCTAGTACCATGTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422464.5
CDS-3UTR CCA 90 bp ACACAGAACAGGATGGCCTGGCACCTAGGGAAAACAACAGTCTGGTATTTTTGGCAAGACAGAAGGGCCTaGACAGGAGCTCTTTTCACA +
Preference number: 4 (lower is better)
Translates to: TQNRMAWHLGKTTVWYFWQDRRA*TGALFT
Trigger: TGTGAAAAGAGCTCCTGTCCAGGCCCTTCTGTCTTG...CCAAAAATACCAGACTGTTGTTTTCCCTAGGTGCCAGGCCATCCTGTTCTGTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000422464.5
CDS-3UTR TCA 90 bp CGACATGGTACTAGATTTACCCGTGTTGGGAAAACAGTCGTCCTGCTGATTTCGGGATTCCTCTTTTCTTaGGGTTTCTCTGCATCGTGG +
Preference number: 4 (lower is better)
Translates to: RHGTRFTRVGKTVVLLISGFLFS*GFSASW
Trigger: CCACGATGCAGAGAAACCTCAAGAAAAGAGGAATCC...CGAAATCAGCAGGACGACTGTTTTCCCAACACGGGTAAATCTAGTACCATGTCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
CDS-3UTR TCA 90 bp CCAGTGCCAATGTCATTGTGTGGTCAGCAGAGATTCTCCCAGGAGCGTCAGTGGTTTCATCGCTTGTATTaGTGTTTCCATTATCTCTGC +
Preference number: 4 (lower is better)
Translates to: PVPMSLCGQQRFSQERQWFHRLY*CFHYLC
Trigger: GCAGAGATAATGGAAACATCAATACAAGCGATGAAA...CCACTGACGCTCCTGGGAGAATCTCTGCTGACCACACAATGACATTGGCACTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382269.7
ENST00000539820.5
ENST00000617910.3
ENST00000629774.2
CDS-3UTR TCA 90 bp CAAACCAAAGAAAGGTTCAGGCTCTACTGCAGGACCCAGGGGCAGGCTTTGCAGTTTCATCGCTTGTATTaGTGTTTCCATTATCTCTGC +
Preference number: 4 (lower is better)
Translates to: QTKERFRLYCRTQGQALQFHRLY*CFHYLC
Trigger: GCAGAGATAATGGAAACATCAATACAAGCGATGAAA...CTGCAAAGCCTGCCCCTGGGTCCTGCAGTAGAGCCTGAACCTTTCTTTGGTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382269.7
ENST00000539820.5
ENST00000617910.3
ENST00000629774.2
CDS-3UTR TCA 90 bp GAATCAGGAAGCATCAAACCAAAGAAAGGTTCAGGCTCTACTGCAGGACCCAGGCAGACATGTTTGCAATaGTGCTCAGCAGATCTTCTG +
Preference number: 4 (lower is better)
Translates to: ESGSIKPKKGSGSTAGPRQTCLQ*CSADLL
Trigger: CAGAAGATCTGCTGAGCATCATTGCAAACATGTCTG...CCTGGGTCCTGCAGTAGAGCCTGAACCTTTCTTTGGTTTGATGCTTCCTGATTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382269.7
ENST00000539820.5
ENST00000617910.3
ENST00000629774.2
CDS-3UTR TCA 90 bp TGGAGAAAAGCTTTGACTGGCTTCAGTTTCGCATTATTTGGTCTGTCCTGCTGGTGTTGCAAGCTCCTGTaGTGGGCCTGTATTTGTTCG +
Preference number: 4 (lower is better)
Translates to: WRKALTGFSFALFGLSCWCCKLL*WACICS
Trigger: CGAACAAATACAGGCCCATCACAGGAGCTTGCAACA...CCAGCAGGACAGACCAAATAATGCGAAACTGAAGCCAGTCAAAGCTTTTCTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382269.7
ENST00000539820.5
ENST00000617910.3
ENST00000629774.2
CDS-3UTR TCA 90 bp ACGCCTGAAAGTGAGCCCTTAGTTTTGGAACCGGTTTGTACAAATGGAAGGCATTGTTGCAAGCTCCTGTaGTGGGCCTGTATTTGTTCG +
Preference number: 4 (lower is better)
Translates to: TPESEPLVLEPVCTNGRHCCKLL*WACICS
Trigger: CGAACAAATACAGGCCCATCACAGGAGCTTGCAACA...ATGCCTTCCATTTGTACAAACCGGTTCCAAAACTAAGGGCTCACTTTCAGGCGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422464.5
ENST00000625793.2
CDS-3UTR TCA 90 bp CAGACAAATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACAAGCCTCGGGGCTGACTaGAGCCGTCCTCATAGACTG +
Preference number: 4 (lower is better)
Translates to: QTNAAITFIHPCLRVTTTSLGAD*SRPHRL
Trigger: CAGTCTATGAGGACGGCTTCAGTCAGCCCCGAGGCT...TGTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATTTGTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR TCA 90 bp GACAAATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACATGAGCCTCGGGGCTGACTaGAGCCGTCCTCATAGACTG +
Preference number: 4 (lower is better)
Translates to: DKCSYNIYSSMPESNYDMSLGAD*SRPHRL
Trigger: CAGTCTATGAGGACGGCTTCAGTCAGCCCCGAGGCT...CATGTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATTTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR TCA 90 bp GGCCAGACAAATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGGTAATGTCCATGGGCTaGAGAAAGCCTGGTGCAGCC +
Preference number: 4 (lower is better)
Translates to: GQTNAAITFIHPCLRVTTVMSMG*RKPGAA
Trigger: GGCTGCACCAGGCTTTCTTCAGCCCATGGACATTAC...CGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATTTGTCTGGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000446278.5
CDS-3UTR TCA 90 bp TTGCCTGTGTTTGGAAAAGAGTCGTACGGTGATTTTGGGAACATGAAGCTGTTCTCCTCGTTCATCAGCTaGTCCTGCACCTGCAGTTTG +
Preference number: 4 (lower is better)
Translates to: LPVFGKESYGDFGNMKLFSSFIS*SCTCSL
Trigger: CAAACTGCAGGTGCAGGATCAGCTGATGAACGAGGA...GAACAGCTTCATGTTCCCAAAATCACCGTACGACTCTTTTCCAAACACAGGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000422464.5
CDS-3UTR TCA 90 bp AAGCAAACGCCTGAAAGTGAGCCCTTAGTTTTGGAACCGGTTTGTACAAATGGATCCTCGTTCATCAGCTaGTCCTGCACCTGCAGTTTG +
Preference number: 4 (lower is better)
Translates to: KQTPESEPLVLEPVCTNGSSFIS*SCTCSL
Trigger: CAAACTGCAGGTGCAGGATCAGCTGATGAACGAGGA...TCCATTTGTACAAACCGGTTCCAAAACTAAGGGCTCACTTTCAGGCGTTTGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422464.5
ENST00000625793.2
CDS-3UTR TCA 90 bp GACAAATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACATGGCCTCTGTGCATCCGTaGAGACGTGGCTGTTCTCCC +
Preference number: 4 (lower is better)
Translates to: DKCSYNIYSSMPESNYDMASVHP*RRGCSP
Trigger: GGGAGAACAGCCACGTCTTCACGGATGCACAGAGGC...CATGTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATTTGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000446278.5
CDS-3UTR TCA 90 bp GACAAATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACATGCCATGGGCACCCTGGTaGGGCCAGTGTTGTCACAGA +
Preference number: 4 (lower is better)
Translates to: DKCSYNIYSSMPESNYDMPWAPW*GQCCHR
Trigger: TCTGTGACAACACTGGCCTCACCAGGGTGCCCATGG...CATGTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATTTGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000446278.5
CDS-3UTR TCA 90 bp ACAAATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACATGGCCATGGGCACCCTGGTaGGGCCAGTGTTGTCACAGA +
Preference number: 4 (lower is better)
Translates to: TNAAITFIHPCLRVTTTWPWAPW*GQCCHR
Trigger: TCTGTGACAACACTGGCCTCACCAGGGTGCCCATGG...CCATGTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000446278.5
CDS-3UTR TCA 90 bp TTGGTGAATCTCTGGAGGATGAGACAAGTCACTTTGCCTTGTTGGTCCTTAAGGCCAGGTTCATGCCAGTaGTGCTGTCACAAGACTCAA +
Preference number: 4 (lower is better)
Translates to: LVNLWRMRQVTLPCWSLRPGSCQ*CCHKTQ
Trigger: TTGAGTCTTGTGACAGCATCACTGGCATGAACCTGG...CCTTAAGGACCAACAAGGCAAAGTGACTTGTCTCATCCTCCAGAGATTCACCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329066.9
ENST00000422464.5
CDS-3UTR TCA 90 bp AGTAACTACGACATGGTACTAGATTTACCCGTGTTGGGAAAACAGTCGTCCTGCCCAGGTTCATGCCAGTaGTGCTGTCACAAGACTCAA +
Preference number: 4 (lower is better)
Translates to: SNYDMVLDLPVLGKQSSCPGSCQ*CCHKTQ
Trigger: TTGAGTCTTGTGACAGCATCACTGGCATGAACCTGG...GCAGGACGACTGTTTTCCCAACACGGGTAAATCTAGTACCATGTCGTAGTTACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000469607.3
CDS-3UTR TCA 90 bp AAATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACATGGTACTTCCTGGGTGCAAGTaGGCTGCTCCCGGCCTTGGA +
Preference number: 4 (lower is better)
Translates to: KCSYNIYSSMPESNYDMVLPGCK*AAPGLG
Trigger: TCCAAGGCCGGGAGCAGCTCACTTGCACCCAGGAAG...TACCATGTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000446278.5
CDS-3UTR TCA 90 bp AGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACATGGTACTAGATGCTCTCGGCAGCCTGTaGGTATCCCGGCCTTCCATC +
Preference number: 4 (lower is better)
Translates to: SYNIYSSMPESNYDMVLDALGSL*VSRPSI
Trigger: GATGGAAGGCCGGGATACTCACAGGCTGCCGAGAGC...ATCTAGTACCATGTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000446278.5
ENST00000469607.3
CDS-3UTR TCA 90 bp AAAGAGTCGTACGGTGATTTTGGGAACATGAAGCTGTTCTGCAGTGTCCTGCCAGTGATTTTGGGAACATaGAGCTGTTCTGCAGTGTCC +
Preference number: 4 (lower is better)
Translates to: KESYGDFGNMKLFCSVLPVILGT*SCSAVS
Trigger: GGACACTGCAGAACAGCTTCATGTTCCCAAAATCAC...TGGCAGGACACTGCAGAACAGCTTCATGTTCCCAAAATCACCGTACGACTCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000469607.3
CDS-3UTR TCA 90 bp AATCTCTGGAGGATGAGACAAGTCACTTTGCCTTGTTGGTCCTTAAGGCTCCAGGTAACAGCACACACTTaGTACAAGACAGAAGGGCCT +
Preference number: 4 (lower is better)
Translates to: NLWRMRQVTLPCWSLRLQVTAHT*YKTEGP
Trigger: AGGCCCTTCTGTCTTGTATCAAGTGTGTGCTGTTAC...CTGGAGCCTTAAGGACCAACAAGGCAAAGTGACTTGTCTCATCCTCCAGAGATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422464.5
CDS-3UTR TCA 90 bp CCTGGACAGGAGCTCTTTTCACAAAGGACCGCTGGCGAGATGAGCCATCCTTCTAACATTAATAACGTCTaGATTCTGACTGCTCCAGTA +
Preference number: 4 (lower is better)
Translates to: PGQELFSQRTAGEMSHPSNINNV*ILTAPV
Trigger: TACTGGAGCAGTCAGAATTCAGACGTTATTAATGTT...AGAAGGATGGCTCATCTCGCCAGCGGTCCTTTGTGAAAAGAGCTCCTGTCCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422464.5
CDS-3UTR GCA 90 bp ACTAGATTTACCCGTGTTGGGAAAACAGTCGTCCTGCTGATTTCGGATTTGCCTTTCTTGAGGTTTCTCTaGATCGTGGCGTACATGGCG +
Preference number: 4 (lower is better)
Translates to: TRFTRVGKTVVLLISDLPFLRFL*IVAYMA
Trigger: CGCCATGTACGCCACGATGCAGAGAAACCTCAAGAA...AGGCAAATCCGAAATCAGCAGGACGACTGTTTTCCCAACACGGGTAAATCTAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
CDS-3UTR GCA 90 bp ACTAGATTTACCCGTGTTGGGAAAACAGTCGTCCTGCTGATTTCGGATTTGCCTTTCCATTATCTCTGCTaGTCGGGCAATCACTCCGCT +
Preference number: 4 (lower is better)
Translates to: TRFTRVGKTVVLLISDLPFHYLC*SGNHSA
Trigger: AGCGGAGTGATTGCCCGAGCAGCAGAGATAATGGAA...AGGCAAATCCGAAATCAGCAGGACGACTGTTTTCCCAACACGGGTAAATCTAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR GCA 90 bp GGTACTAGATTTACCCGTGTTGGGAAAACAGTCGTCCTGCTGATTTCGGATTTGTTCCATTATCTCTGCTaGTCGGGCAATCACTCCGCT +
Preference number: 4 (lower is better)
Translates to: GTRFTRVGKTVVLLISDLFHYLC*SGNHSA
Trigger: AGCGGAGTGATTGCCCGAGCAGCAGAGATAATGGAA...CAAATCCGAAATCAGCAGGACGACTGTTTTCCCAACACGGGTAAATCTAGTACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR GCA 90 bp AGTAACTACGACATGGTACTAGATTTACCCGTGTTGGGAAAACAGTCGTCCTGCTTCCATTATCTCTGCTaGTCGGGCAATCACTCCGCT +
Preference number: 4 (lower is better)
Translates to: SNYDMVLDLPVLGKQSSCFHYLC*SGNHSA
Trigger: AGCGGAGTGATTGCCCGAGCAGCAGAGATAATGGAA...GCAGGACGACTGTTTTCCCAACACGGGTAAATCTAGTACCATGTCGTAGTTACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR GCA 90 bp AAATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACATGGTAAACCCGTTCATCTGCTaGCGCGGGTTGGCCGTGGAC +
Preference number: 4 (lower is better)
Translates to: KCSYNIYSSMPESNYDMVNPFIC*RGLAVD
Trigger: GTCCACGGCCAACCCGCGGCAGCAGATGAACGGGTT...TACCATGTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR GCA 90 bp AGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACATGGTACTAGATGTCAACCCGTTCATCTaGTGCCGCGGGTTGGCCGTG +
Preference number: 4 (lower is better)
Translates to: SYNIYSSMPESNYDMVLDVNPFI*CRGLAV
Trigger: CACGGCCAACCCGCGGCAGCAGATGAACGGGTTGAC...ATCTAGTACCATGTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR GCA 90 bp ACGCCTGAAAGTGAGCCCTTAGTTTTGGAACCGGTTTGTACAAATGGAAGGCATACGCCAGATCCAAGGTaGTGGAATTGGACAGCACAA +
Preference number: 4 (lower is better)
Translates to: TPESEPLVLEPVCTNGRHTPDPR*WNWTAQ
Trigger: TTGTGCTGTCCAATTCCAGCACCTTGGATCTGGCGT...ATGCCTTCCATTTGTACAAACCGGTTCCAAAACTAAGGGCTCACTTTCAGGCGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422464.5
ENST00000625793.2
CDS-3UTR GCA 90 bp AGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACATGGTACTAGATTGTCGGCCACGCTCCTaGTGGCGATGGCTGTGCTCA +
Preference number: 4 (lower is better)
Translates to: SYNIYSSMPESNYDMVLDCRPRS*WRWLCS
Trigger: TGAGCACAGCCATCGCCAGCAGGAGCGTGGCCGACA...ATCTAGTACCATGTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000446278.5
ENST00000469607.3
CDS-3UTR GCA 90 bp AAAGCCCCAGAAGGAACAAATCAGGCAATGTTTACAAGAAAAGGCCAGACAAATCAGCTCACGCCTCTGTaGATCCGTGAAGACGTGGCT +
Preference number: 4 (lower is better)
Translates to: KAPEGTNQAMFTRKGQTNQLTPL*IREDVA
Trigger: AGCCACGTCTTCACGGATGCACAGAGGCGTGAGCTG...ATTTGTCTGGCCTTTTCTTGTAAACATTGCCTGATTTGTTCCTTCTGGGGCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR GCA 90 bp TGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACATGGTACTAACCCGAGACAGGGAGTaGTTCTCCAGCTCACGCCTC +
Preference number: 4 (lower is better)
Translates to: CSYNIYSSMPESNYDMVLTRDRE*FSSSRL
Trigger: GAGGCGTGAGCTGGAGAAGCACTCCCTGTCTCGGGT...TAGTACCATGTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000446278.5
ENST00000469607.3
CDS-3UTR GCA 90 bp GGTACTAGATTTACCCGTGTTGGGAAAACAGTCGTCCTGCTGATTTCGGATTTGAGTCTTCGGGGAATTTaGCGACTTGGAAGGCATCCA +
Preference number: 4 (lower is better)
Translates to: GTRFTRVGKTVVLLISDLSLRGI*RLGRHP
Trigger: TGGATGCCTTCCAAGTCGGCAAATTCCCCGAAGACT...CAAATCCGAAATCAGCAGGACGACTGTTTTCCCAACACGGGTAAATCTAGTACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000469607.3
CDS-3UTR GCA 90 bp AGTAACTACGACATGGTACTAGATTTACCCGTGTTGGGAAAACAGTCGTCCTGCAGTCTTCGGGGAATTTaGCGACTTGGAAGGCATCCA +
Preference number: 4 (lower is better)
Translates to: SNYDMVLDLPVLGKQSSCSLRGI*RLGRHP
Trigger: TGGATGCCTTCCAAGTCGGCAAATTCCCCGAAGACT...GCAGGACGACTGTTTTCCCAACACGGGTAAATCTAGTACCATGTCGTAGTTACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000469607.3
CDS-3UTR GCA 90 bp CCTGAGAGTAACTACGACATGGTACTAGATTTACCCGTGTTGGGAAAACAGTCGAGTCTTCGGGGAATTTaGCGACTTGGAAGGCATCCA +
Preference number: 4 (lower is better)
Translates to: PESNYDMVLDLPVLGKQSSLRGI*RLGRHP
Trigger: TGGATGCCTTCCAAGTCGGCAAATTCCCCGAAGACT...CGACTGTTTTCCCAACACGGGTAAATCTAGTACCATGTCGTAGTTACTCTCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000469607.3
CDS-3UTR GCA 90 bp TTTGGAAAAGAGTCGTACGGTGATTTTGGGAACATGAAGCTGTTCTGCAGTGTCCCAGACTCCTCACAGTaGACAAAGTCCCCATTCTCC +
Preference number: 4 (lower is better)
Translates to: FGKESYGDFGNMKLFCSVPDSSQ*TKSPFS
Trigger: GGAGAATGGGGACTTTGTGCACTGTGAGGAGTCTGG...GACACTGCAGAACAGCTTCATGTTCCCAAAATCACCGTACGACTCTTTTCCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000469607.3
CDS-3UTR GCA 90 bp AATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACATGGTACTGGGTGCAAGTGAGCTaGTCCCGGCCTTGGAGCTCA +
Preference number: 4 (lower is better)
Translates to: NAAITFIHPCLRVTTTWYWVQVS*SRPWSS
Trigger: TGAGCTCCAAGGCCGGGAGCAGCTCACTTGCACCCA...GTACCATGTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000446278.5
CDS-3UTR GCA 90 bp CAGACAAATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACACGTCGAGGTGAGACCTaGGAAGCCTCCGATCAGCAG +
Preference number: 4 (lower is better)
Translates to: QTNAAITFIHPCLRVTTTRRGET*EASDQQ
Trigger: CTGCTGATCGGAGGCTTCGCAGGTCTCACCTCGACG...TGTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATTTGTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000446278.5
CDS-3UTR GCA 90 bp ACAAATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACATGGAGTGTCCTGCCACTTTaGCCTCAGAGGGCTCTCGGC +
Preference number: 4 (lower is better)
Translates to: TNAAITFIHPCLRVTTTWSVLPL*PQRALG
Trigger: GCCGAGAGCCCTCTGAGGGCAAAGTGGCAGGACACT...CCATGTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000446278.5
CDS-3UTR GCA 90 bp AATCTCTGGAGGATGAGACAAGTCACTTTGCCTTGTTGGTCCTTAAGGCTCCAGAACATGAAGCTGTTCTaGAGTGTCCTGCCACTTTGC +
Preference number: 4 (lower is better)
Translates to: NLWRMRQVTLPCWSLRLQNMKLF*SVLPLC
Trigger: GCAAAGTGGCAGGACACTGCAGAACAGCTTCATGTT...CTGGAGCCTTAAGGACCAACAAGGCAAAGTGACTTGTCTCATCCTCCAGAGATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329066.9
ENST00000422464.5
CDS-3UTR GCA 90 bp AGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACATGGTACTAGATCGGTGCCCCCGAGACTaGCTTGTTGAGTCAGGGAGG +
Preference number: 4 (lower is better)
Translates to: SYNIYSSMPESNYDMVLDRCPRD*LVESGR
Trigger: CCTCCCTGACTCAACAAGGCAGTCTCGGGGGCACCG...ATCTAGTACCATGTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329066.9
ENST00000422464.5
CDS-3UTR GCA 90 bp TCATCCATGCCTGAGAGTAACTACGACATGGTACTAGATTTACCCGTGTTGGGAGGACAAATGCTTGTTTaGAGGAGGCCACAGAGGATC +
Preference number: 4 (lower is better)
Translates to: SSMPESNYDMVLDLPVLGGQMLV*RRPQRI
Trigger: GATCCTCTGTGGCCTCCTGCAAACAAGCATTTGTCC...TCCCAACACGGGTAAATCTAGTACCATGTCGTAGTTACTCTCAGGCATGGATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422464.5
CDS-3UTR CCA 90 bp CCAGACAAATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACGCGCCCCATCTGGGGTaGTCTCTGTTGTTGCAAGCT +
Preference number: 4 (lower is better)
Translates to: PDKCSYNIYSSMPESNYDAPHLG*SLLLQA
Trigger: AGCTTGCAACAACAGAGACCACCCCAGATGGGGCGC...GTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATTTGTCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR CCA 90 bp AAAGCCCCAGAAGGAACAAATCAGGCAATGTTTACAAGAAAAGGCCAGACAAATGCGCCCCATCTGGGGTaGTCTCTGTTGTTGCAAGCT +
Preference number: 4 (lower is better)
Translates to: KAPEGTNQAMFTRKGQTNAPHLG*SLLLQA
Trigger: AGCTTGCAACAACAGAGACCACCCCAGATGGGGCGC...ATTTGTCTGGCCTTTTCTTGTAAACATTGCCTGATTTGTTCCTTCTGGGGCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR CCA 90 bp ACAAATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACATGGGCCGTCCTCATAGACTaGAGGGAGCCATCGTGCCAG +
Preference number: 4 (lower is better)
Translates to: TNAAITFIHPCLRVTTTWAVLID*REPSCQ
Trigger: CTGGCACGATGGCTCCCTCCAGTCTATGAGGACGGC...CCATGTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR CCA 90 bp CCTGTGTTTGGAAAAGAGTCGTACGGTGATTTTGGGAACATGAAGCTGTTCTGCGTGAACGCGATGTCGTaGTCGATGTATTGTCCCCAT +
Preference number: 4 (lower is better)
Translates to: PVFGKESYGDFGNMKLFCVNAMS*SMYCPH
Trigger: ATGGGGACAATACATCGACCACGACATCGCGTTCAC...GCAGAACAGCTTCATGTTCCCAAAATCACCGTACGACTCTTTTCCAAACACAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR CCA 90 bp GACAAATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACATGAGCTGCCATACACGGTaGACGCGTCCAGGAACGAGG +
Preference number: 4 (lower is better)
Translates to: DKCSYNIYSSMPESNYDMSCHTR*TRPGTR
Trigger: CCTCGTTCCTGGACGCGTCCACCGTGTATGGCAGCT...CATGTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATTTGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR CCA 90 bp GACAAATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACATGCGGGTCCCAGGATCCTaGGGATGTAATCCCTCAGGG +
Preference number: 4 (lower is better)
Translates to: DKCSYNIYSSMPESNYDMRVPGS*GCNPSG
Trigger: CCCTGAGGGATTACATCCCCAGGATCCTGGGACCCG...CATGTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATTTGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR CCA 90 bp AATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACATGGTACCGGGTCCCAGGATCCTaGGGATGTAATCCCTCAGGG +
Preference number: 4 (lower is better)
Translates to: NAAITFIHPCLRVTTTWYRVPGS*GCNPSG
Trigger: CCCTGAGGGATTACATCCCCAGGATCCTGGGACCCG...GTACCATGTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR CCA 90 bp CCAGACAAATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACCTGTGGAGAACACGTTaGACACAGTGGGGTTGGCGG +
Preference number: 4 (lower is better)
Translates to: PDKCSYNIYSSMPESNYDLWRTR*TQWGWR
Trigger: CCGCCAACCCCACTGTGTCCAACGTGTTCTCCACAG...GTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATTTGTCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000446278.5
CDS-3UTR CCA 90 bp AAAGCCCCAGAAGGAACAAATCAGGCAATGTTTACAAGAAAAGGCCAGACAAATCTGTGGAGAACACGTTaGACACAGTGGGGTTGGCGG +
Preference number: 4 (lower is better)
Translates to: KAPEGTNQAMFTRKGQTNLWRTR*TQWGWR
Trigger: CCGCCAACCCCACTGTGTCCAACGTGTTCTCCACAG...ATTTGTCTGGCCTTTTCTTGTAAACATTGCCTGATTTGTTCCTTCTGGGGCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR CCA 90 bp AAATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACATGGTAGGTGCTCCTGGAAGCTaGCGTCCAGCCTCCTCACCA +
Preference number: 4 (lower is better)
Translates to: KCSYNIYSSMPESNYDMVGAPGS*RPASSP
Trigger: TGGTGAGGAGGCTGGACGCCAGCTTCCAGGAGCACC...TACCATGTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000446278.5
CDS-3UTR CCA 90 bp TATTCATCCATGCCTGAGAGTAACTACGACATGGTACTAGATTTACCCGTGTTGCACCTGCAGTTTGGCTaGTCTTGCAAGAAGGCCTCG +
Preference number: 4 (lower is better)
Translates to: YSSMPESNYDMVLDLPVLHLQFG*SCKKAS
Trigger: CGAGGCCTTCTTGCAAGACCAGCCAAACTGCAGGTG...CAACACGGGTAAATCTAGTACCATGTCGTAGTTACTCTCAGGCATGGATGAATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000422464.5
CDS-3UTR CCA 90 bp GAAAGTGAGCCCTTAGTTTTGGAACCGGTTTGTACAAATGGAAGGCATCTTCATCACCTGCAGTTTGGCTaGTCTTGCAAGAAGGCCTCG +
Preference number: 4 (lower is better)
Translates to: ESEPLVLEPVCTNGRHLHHLQFG*SCKKAS
Trigger: CGAGGCCTTCTTGCAAGACCAGCCAAACTGCAGGTG...ATGAAGATGCCTTCCATTTGTACAAACCGGTTCCAAAACTAAGGGCTCACTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422464.5
ENST00000625793.2
CDS-3UTR CCA 90 bp AGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACATGGTACTAGATCCACTCATTGTAACCTaGCAGCCCGTGGTCCCGGCC +
Preference number: 4 (lower is better)
Translates to: SYNIYSSMPESNYDMVLDPLIVT*QPVVPA
Trigger: GGCCGGGACCACGGGCTGCCAGGTTACAATGAGTGG...ATCTAGTACCATGTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000422464.5
CDS-3UTR CCA 90 bp GATTTGCCTGTGTTTGGAAAAGAGTCGTACGGTGATTTTGGGAACATGAAGCTGGCATCCGTGAAGACGTaGCTGTTCTCCCACCAAAAC +
Preference number: 4 (lower is better)
Translates to: DLPVFGKESYGDFGNMKLASVKT*LFSHQN
Trigger: GTTTTGGTGGGAGAACAGCCACGTCTTCACGGATGC...CAGCTTCATGTTCCCAAAATCACCGTACGACTCTTTTCCAAACACAGGCAAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000469607.3
CDS-3UTR CCA 90 bp AGACAGGAGGATTGCAAGAGTGGTGTTTCCAGGGTTCACAAAATAAAGATGTGTGGGAATTTGCCGACTTaGAAGGCATCCATGGGCACC +
Preference number: 4 (lower is better)
Translates to: RQEDCKSGVSRVHKIKMCGNLPT*KASMGT
Trigger: GGTGCCCATGGATGCCTTCCAAGTCGGCAAATTCCC...ACACATCTTTATTTTGTGAACCCTGGAAACACCACTCTTGCAATCCTCCTGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329066.9
ENST00000422464.5
CDS-3UTR CCA 90 bp GGCCAGACAAATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACTGGAAGCCGCCTTTaGTGTTTCTGCACCTCGCAG +
Preference number: 4 (lower is better)
Translates to: GQTNAAITFIHPCLRVTTTGSRL*CFCTSQ
Trigger: CTGCGAGGTGCAGAAACACCAAAGGCGGCTTCCAGT...CGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATTTGTCTGGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000382201.7
ENST00000446278.5
CDS-3UTR CCA 90 bp AAAGCCCCAGAAGGAACAAATCAGGCAATGTTTACAAGAAAAGGCCAGACAAATGAGCAGCCAGCGACATaGAGATCCAAGTCACCCGAG +
Preference number: 4 (lower is better)
Translates to: KAPEGTNQAMFTRKGQTNEQPAT*RSKSPE
Trigger: CTCGGGTGACTTGGATCTCCATGTCGCTGGCTGCTC...ATTTGTCTGGCCTTTTCTTGTAAACATTGCCTGATTTGTTCCTTCTGGGGCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR CCA 90 bp AATCTCTGGAGGATGAGACAAGTCACTTTGCCTTGTTGGTCCTTAAGGCTCCAGGGAGGATTGCAAGAGTaGTGTTTCCAGGGTTCACAA +
Preference number: 4 (lower is better)
Translates to: NLWRMRQVTLPCWSLRLQGGLQE*CFQGSQ
Trigger: TTGTGAACCCTGGAAACACCACTCTTGCAATCCTCC...CTGGAGCCTTAAGGACCAACAAGGCAAAGTGACTTGTCTCATCCTCCAGAGATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329066.9
ENST00000422464.5
CDS-3UTR CCA 90 bp CAGGACCCAGGGGCAGGCTTTGCAGGTGGATGTAGACGTCATTGGAGAAAAGCTGAGAAAAGCTTTGACTaGCTTCAGTTTCGCATTATT +
Preference number: 4 (lower is better)
Translates to: QDPGAGFAGGCRRHWRKAEKSFD*LQFRII
Trigger: AATAATGCGAAACTGAAGCCAGTCAAAGCTTTTCTC...AGCTTTTCTCCAATGACGTCTACATCCACCTGCAAAGCCTGCCCCTGGGTCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000382269.7
ENST00000539820.5
ENST00000617910.3
ENST00000629774.2
CDS-3UTR CCA 90 bp AATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACATGGTACTGGAAACATGCGGCATaGTGTGGCCCACCTGCTCCG +
Preference number: 4 (lower is better)
Translates to: NAAITFIHPCLRVTTTWYWKHAA*CGPPAP
Trigger: CGGAGCAGGTGGGCCACACCATGCCGCATGTTTCCA...GTACCATGTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422464.5
CDS-3UTR CCA 90 bp ACGCCTGAAAGTGAGCCCTTAGTTTTGGAACCGGTTTGTACAAATGGAAGGCATCTGGAGGGAAGTTTCTaGCTTCCGGACAAATGCTTG +
Preference number: 4 (lower is better)
Translates to: TPESEPLVLEPVCTNGRHLEGSF*LPDKCL
Trigger: CAAGCATTTGTCCGGAAGCCAGAAACTTCCCTCCAG...ATGCCTTCCATTTGTACAAACCGGTTCCAAAACTAAGGGCTCACTTTCAGGCGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422464.5
CDS-3UTR TCA 90 bp CCTGAGAGTAACTACGACATGGTACTAGATTTACCCGTGTTGGGAAAACAGTCGAGCCAACTGCACTGCTaGGTAATTTTCACGGCTGTA +
Preference number: 4 (lower is better)
Translates to: PESNYDMVLDLPVLGKQSSQLHC*VIFTAV
Trigger: TACAGCCGTGAAAATTACTCAGCAGTGCAGTTGGCT...CGACTGTTTTCCCAACACGGGTAAATCTAGTACCATGTCGTAGTTACTCTCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000382201.7
CDS-3UTR TCA 90 bp TCATCCATGCCTGAGAGTAACTACGACATGGTACTAGATTTACCCGTGTTGGGAAGCCAACTGCACTGCTaGGTAATTTTCACGGCTGTA +
Preference number: 4 (lower is better)
Translates to: SSMPESNYDMVLDLPVLGSQLHC*VIFTAV
Trigger: TACAGCCGTGAAAATTACTCAGCAGTGCAGTTGGCT...TCCCAACACGGGTAAATCTAGTACCATGTCGTAGTTACTCTCAGGCATGGATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000382201.7
CDS-3UTR TCA 90 bp GAGAGTAACTACGACATGGTACTAGATTTACCCGTGTTGGGAAAACAGTCGTCCGGATTCCTCTTTTCTTaGGGTTTCTCTGCATCGTGG +
Preference number: 4 (lower is better)
Translates to: ESNYDMVLDLPVLGKQSSGFLFS*GFSASW
Trigger: CCACGATGCAGAGAAACCTCAAGAAAAGAGGAATCC...GGACGACTGTTTTCCCAACACGGGTAAATCTAGTACCATGTCGTAGTTACTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
CDS-3UTR TCA 90 bp TCATCCATGCCTGAGAGTAACTACGACATGGTACTAGATTTACCCGTGTTGGGAGGATTCCTCTTTTCTTaGGGTTTCTCTGCATCGTGG +
Preference number: 4 (lower is better)
Translates to: SSMPESNYDMVLDLPVLGGFLFS*GFSASW
Trigger: CCACGATGCAGAGAAACCTCAAGAAAAGAGGAATCC...TCCCAACACGGGTAAATCTAGTACCATGTCGTAGTTACTCTCAGGCATGGATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
CDS-3UTR TCA 90 bp GAGACAAGTCACTTTGCCTTGTTGGTCCTTAAGGCTCCAGCCTCTCCCTCAGAAGGATGCTGTGATTGTTaGGTTTTCAGGTTGACTTTT +
Preference number: 4 (lower is better)
Translates to: ETSHFALLVLKAPASPSEGCCDC*VFRLTF
Trigger: AAAAGTCAACCTGAAAACTCAACAATCACAGCATCC...TTCTGAGGGAGAGGCTGGAGCCTTAAGGACCAACAAGGCAAAGTGACTTGTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329066.9
ENST00000422464.5
CDS-3UTR TCA 90 bp CTCCTTCCTCTCCTGTGCTTCCAGCCGATCCTCAGATTAAGTGGAAGCAAACGCTGTGACAACCTCATTTaGAACTTGAATGACATGTCT +
Preference number: 4 (lower is better)
Translates to: LLPLLCFQPILRLSGSKRCDNLI*NLNDMS
Trigger: AGACATGTCATTCAAGTTTCAAATGAGGTTGTCACA...GCGTTTGCTTCCACTTAATCTGAGGATCGGCTGGAAGCACAGGAGAGGAAGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422464.5
ENST00000625793.2
CDS-3UTR TCA 90 bp AATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACATGGTACTGGTGCTCTGTGGTGTaGACGCGATGTCGTGGTCGA +
Preference number: 4 (lower is better)
Translates to: NAAITFIHPCLRVTTTWYWCSVV*TRCRGR
Trigger: TCGACCACGACATCGCGTTCACACCACAGAGCACCA...GTACCATGTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR TCA 90 bp AGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACATGGTACTAGATCCATGGGCACCCTGGTaGGGCCAGTGTTGTCACAGA +
Preference number: 4 (lower is better)
Translates to: SYNIYSSMPESNYDMVLDPWAPW*GQCCHR
Trigger: TCTGTGACAACACTGGCCTCACCAGGGTGCCCATGG...ATCTAGTACCATGTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000446278.5
ENST00000469607.3
CDS-3UTR TCA 90 bp AAATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACATGGTACCATGGGCACCCTGGTaGGGCCAGTGTTGTCACAGA +
Preference number: 4 (lower is better)
Translates to: KCSYNIYSSMPESNYDMVPWAPW*GQCCHR
Trigger: TCTGTGACAACACTGGCCTCACCAGGGTGCCCATGG...TACCATGTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000446278.5
CDS-3UTR TCA 90 bp GATTTGCCTGTGTTTGGAAAAGAGTCGTACGGTGATTTTGGGAACATGAAGCTGCCAGGTTCATGCCAGTaGTGCTGTCACAAGACTCAA +
Preference number: 4 (lower is better)
Translates to: DLPVFGKESYGDFGNMKLPGSCQ*CCHKTQ
Trigger: TTGAGTCTTGTGACAGCATCACTGGCATGAACCTGG...CAGCTTCATGTTCCCAAAATCACCGTACGACTCTTTTCCAAACACAGGCAAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000469607.3
CDS-3UTR TCA 90 bp TTGCCTGTGTTTGGAAAAGAGTCGTACGGTGATTTTGGGAACATGAAGCTGTTCCCAGGTTCATGCCAGTaGTGCTGTCACAAGACTCAA +
Preference number: 4 (lower is better)
Translates to: LPVFGKESYGDFGNMKLFPGSCQ*CCHKTQ
Trigger: TTGAGTCTTGTGACAGCATCACTGGCATGAACCTGG...GAACAGCTTCATGTTCCCAAAATCACCGTACGACTCTTTTCCAAACACAGGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000469607.3
CDS-3UTR TCA 90 bp GACAAATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACATGAAATCACCGTCGAGGTaGGACCTGCGAAGCCTCCGA +
Preference number: 4 (lower is better)
Translates to: DKCSYNIYSSMPESNYDMKSPSR*DLRSLR
Trigger: TCGGAGGCTTCGCAGGTCTCACCTCGACGGTGATTT...CATGTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATTTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000446278.5
CDS-3UTR TCA 90 bp TGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACATGGTACTAAAATCACCGTCGAGGTaGGACCTGCGAAGCCTCCGA +
Preference number: 4 (lower is better)
Translates to: CSYNIYSSMPESNYDMVLKSPSR*DLRSLR
Trigger: TCGGAGGCTTCGCAGGTCTCACCTCGACGGTGATTT...TAGTACCATGTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000446278.5
ENST00000469607.3
CDS-3UTR TCA 90 bp CTACGACATGGTACTAGATTTACCCGTGTTGGGAAAACAGTCGTCCTGCTGATTGTGATTTTGGGAACATaGAGCTGTTCTGCAGTGTCC +
Preference number: 4 (lower is better)
Translates to: LRHGTRFTRVGKTVVLLIVILGT*SCSAVS
Trigger: GGACACTGCAGAACAGCTTCATGTTCCCAAAATCAC...AATCAGCAGGACGACTGTTTTCCCAACACGGGTAAATCTAGTACCATGTCGTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000469607.3
CDS-3UTR TCA 90 bp CCTGAGAGTAACTACGACATGGTACTAGATTTACCCGTGTTGGGAAAACAGTCGGTGATTTTGGGAACATaGAGCTGTTCTGCAGTGTCC +
Preference number: 4 (lower is better)
Translates to: PESNYDMVLDLPVLGKQSVILGT*SCSAVS
Trigger: GGACACTGCAGAACAGCTTCATGTTCCCAAAATCAC...CGACTGTTTTCCCAACACGGGTAAATCTAGTACCATGTCGTAGTTACTCTCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000469607.3
CDS-3UTR TCA 90 bp CCTGTGTTTGGAAAAGAGTCGTACGGTGATTTTGGGAACATGAAGCTGTTCTGCAAACAGTCGTCCTGCTaGTTTCGGATTTGCCTGTGT +
Preference number: 4 (lower is better)
Translates to: PVFGKESYGDFGNMKLFCKQSSC*FRICLC
Trigger: ACACAGGCAAATCCGAAATCAGCAGGACGACTGTTT...GCAGAACAGCTTCATGTTCCCAAAATCACCGTACGACTCTTTTCCAAACACAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000469607.3
CDS-3UTR TCA 90 bp CCTGAGAGTAACTACGACATGGTACTAGATTTACCCGTGTTGGGAAAACAGTCGAAACAGTCGTCCTGCTaGTTTCGGATTTGCCTGTGT +
Preference number: 4 (lower is better)
Translates to: PESNYDMVLDLPVLGKQSKQSSC*FRICLC
Trigger: ACACAGGCAAATCCGAAATCAGCAGGACGACTGTTT...CGACTGTTTTCCCAACACGGGTAAATCTAGTACCATGTCGTAGTTACTCTCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000469607.3
CDS-3UTR TCA 90 bp TTTGGAAAAGAGTCGTACGGTGATTTTGGGAACATGAAGCTGTTCTGCAGTGTCGCTTCACATGTGAAATaGGGACGGCAGCTTTACAGG +
Preference number: 4 (lower is better)
Translates to: FGKESYGDFGNMKLFCSVASHVK*GRQLYR
Trigger: CCTGTAAAGCTGCCGTCCTCATTTCACATGTGAAGC...GACACTGCAGAACAGCTTCATGTTCCCAAAATCACCGTACGACTCTTTTCCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329066.9
ENST00000422464.5
CDS-3UTR TCA 90 bp GTGTTTGGAAAAGAGTCGTACGGTGATTTTGGGAACATGAAGCTGTTCTGCAGTCAGCTGCTTCACATGTaGAATGAGGACGGCAGCTTT +
Preference number: 4 (lower is better)
Translates to: VFGKESYGDFGNMKLFCSQLLHM*NEDGSF
Trigger: AAAGCTGCCGTCCTCATTTCACATGTGAAGCAGCTG...ACTGCAGAACAGCTTCATGTTCCCAAAATCACCGTACGACTCTTTTCCAAACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329066.9
ENST00000422464.5
CDS-3UTR GCA 90 bp GAGAGTAACTACGACATGGTACTAGATTTACCCGTGTTGGGAAAACAGTCGTCCTGTTTCCATTATCTCTaGTGCTCGGGCAATCACTCC +
Preference number: 4 (lower is better)
Translates to: ESNYDMVLDLPVLGKQSSCFHYL*CSGNHS
Trigger: GGAGTGATTGCCCGAGCAGCAGAGATAATGGAAACA...GGACGACTGTTTTCCCAACACGGGTAAATCTAGTACCATGTCGTAGTTACTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR GCA 90 bp CCTGTGTTTGGAAAAGAGTCGTACGGTGATTTTGGGAACATGAAGCTGTTCTGCTGTTTCCATTATCTCTaGTGCTCGGGCAATCACTCC +
Preference number: 4 (lower is better)
Translates to: PVFGKESYGDFGNMKLFCCFHYL*CSGNHS
Trigger: GGAGTGATTGCCCGAGCAGCAGAGATAATGGAAACA...GCAGAACAGCTTCATGTTCCCAAAATCACCGTACGACTCTTTTCCAAACACAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR GCA 90 bp GGTACTAGATTTACCCGTGTTGGGAAAACAGTCGTCCTGCTGATTTCGGATTTGTGTTTCCATTATCTCTaGTGCTCGGGCAATCACTCC +
Preference number: 4 (lower is better)
Translates to: GTRFTRVGKTVVLLISDLCFHYL*CSGNHS
Trigger: GGAGTGATTGCCCGAGCAGCAGAGATAATGGAAACA...CAAATCCGAAATCAGCAGGACGACTGTTTTCCCAACACGGGTAAATCTAGTACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR GCA 90 bp CCTGAGAGTAACTACGACATGGTACTAGATTTACCCGTGTTGGGAAAACAGTCGTGTTTCCATTATCTCTaGTGCTCGGGCAATCACTCC +
Preference number: 4 (lower is better)
Translates to: PESNYDMVLDLPVLGKQSCFHYL*CSGNHS
Trigger: GGAGTGATTGCCCGAGCAGCAGAGATAATGGAAACA...CGACTGTTTTCCCAACACGGGTAAATCTAGTACCATGTCGTAGTTACTCTCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR GCA 90 bp GACAAATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACATGAGGGTGATGATCTGGTaGAGAGCGCCCACGACCTTG +
Preference number: 4 (lower is better)
Translates to: DKCSYNIYSSMPESNYDMRVMIW*RAPTTL
Trigger: CAAGGTCGTGGGCGCTCTGCACCAGATCATCACCCT...CATGTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATTTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR GCA 90 bp AAATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACATGGTAACCCGAGACAGGGAGTaGTTCTCCAGCTCACGCCTC +
Preference number: 4 (lower is better)
Translates to: KCSYNIYSSMPESNYDMVTRDRE*FSSSRL
Trigger: GAGGCGTGAGCTGGAGAAGCACTCCCTGTCTCGGGT...TACCATGTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000446278.5
CDS-3UTR GCA 90 bp AGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACATGGTACTAGATACCCGAGACAGGGAGTaGTTCTCCAGCTCACGCCTC +
Preference number: 4 (lower is better)
Translates to: SYNIYSSMPESNYDMVLDTRDRE*FSSSRL
Trigger: GAGGCGTGAGCTGGAGAAGCACTCCCTGTCTCGGGT...ATCTAGTACCATGTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000446278.5
ENST00000469607.3
CDS-3UTR GCA 90 bp TATTCATCCATGCCTGAGAGTAACTACGACATGGTACTAGATTTACCCGTGTTGCCAGACTCCTCACAGTaGACAAAGTCCCCATTCTCC +
Preference number: 4 (lower is better)
Translates to: YSSMPESNYDMVLDLPVLPDSSQ*TKSPFS
Trigger: GGAGAATGGGGACTTTGTGCACTGTGAGGAGTCTGG...CAACACGGGTAAATCTAGTACCATGTCGTAGTTACTCTCAGGCATGGATGAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000469607.3
CDS-3UTR GCA 90 bp ACTGTTCTGCTCTCTGCTTCTCTCAGTTCAAAAGTCAGACTTACACAAGTGAGTCCAGACTCCTCACAGTaGACAAAGTCCCCATTCTCC +
Preference number: 4 (lower is better)
Translates to: TVLLSASLSSKVRLTQVSPDSSQ*TKSPFS
Trigger: GGAGAATGGGGACTTTGTGCACTGTGAGGAGTCTGG...ACTCACTTGTGTAAGTCTGACTTTTGAACTGAGAGAAGCAGAGAGCAGAACAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422464.5
ENST00000625793.2
CDS-3UTR GCA 90 bp TGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACATGGTACTATGGAGCTCATACCCGTaGCGGCAGGAATACACCAGC +
Preference number: 4 (lower is better)
Translates to: CSYNIYSSMPESNYDMVLWSSYP*RQEYTS
Trigger: GCTGGTGTATTCCTGCCGGCACGGGTATGAGCTCCA...TAGTACCATGTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000446278.5
ENST00000469607.3
CDS-3UTR GCA 90 bp AAATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACATGGTATGGGTGCAAGTGAGCTaGTCCCGGCCTTGGAGCTCA +
Preference number: 4 (lower is better)
Translates to: KCSYNIYSSMPESNYDMVWVQVS*SRPWSS
Trigger: TGAGCTCCAAGGCCGGGAGCAGCTCACTTGCACCCA...TACCATGTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000446278.5
CDS-3UTR GCA 90 bp CCTGAGAGTAACTACGACATGGTACTAGATTTACCCGTGTTGGGAAAACAGTCGACTCGTTCACATCTTTaGAGAGGGGAGGCTGGAAAT +
Preference number: 4 (lower is better)
Translates to: PESNYDMVLDLPVLGKQSTRSHL*RGEAGN
Trigger: ATTTCCAGCCTCCCCTCTGCAAAGATGTGAACGAGT...CGACTGTTTTCCCAACACGGGTAAATCTAGTACCATGTCGTAGTTACTCTCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000382201.7
CDS-3UTR GCA 90 bp AGGCCAGACAAATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGGGGTGGGCACCGTCTaGACACTCGTTCACATCTTT +
Preference number: 4 (lower is better)
Translates to: RPDKCSYNIYSSMPESNYGVGTV*TLVHIF
Trigger: AAAGATGTGAACGAGTGTGCAGACGGTGCCCACCCC...GTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATTTGTCTGGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000382201.7
CDS-3UTR GCA 90 bp CCAGACAAATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACGGGGTGGGCACCGTCTaGACACTCGTTCACATCTTT +
Preference number: 4 (lower is better)
Translates to: PDKCSYNIYSSMPESNYDGVGTV*TLVHIF
Trigger: AAAGATGTGAACGAGTGTGCAGACGGTGCCCACCCC...GTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATTTGTCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000382201.7
ENST00000446278.5
CDS-3UTR GCA 90 bp AAATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACATGGTACGCCTTTGGTGTTTCTaGACCTCGCAGAGGCGTGGC +
Preference number: 4 (lower is better)
Translates to: KCSYNIYSSMPESNYDMVRLWCF*TSQRRG
Trigger: GCCACGCCTCTGCGAGGTGCAGAAACACCAAAGGCG...TACCATGTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000382201.7
ENST00000446278.5
CDS-3UTR GCA 90 bp AGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACATGGTACTAGATCGTCGAGGTGAGACCTaGGAAGCCTCCGATCAGCAG +
Preference number: 4 (lower is better)
Translates to: SYNIYSSMPESNYDMVLDRRGET*EASDQQ
Trigger: CTGCTGATCGGAGGCTTCGCAGGTCTCACCTCGACG...ATCTAGTACCATGTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000446278.5
ENST00000469607.3
CDS-3UTR GCA 90 bp AGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACATGGTACTAGATGTCCCTACGGCCTGGTaGTTTCCGCATCTCAGCTCG +
Preference number: 4 (lower is better)
Translates to: SYNIYSSMPESNYDMVLDVPTAW*FPHLSS
Trigger: CGAGCTGAGATGCGGAAAGCACCAGGCCGTAGGGAC...ATCTAGTACCATGTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000469607.3
CDS-3UTR GCA 90 bp AGGCCAGACAAATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACTGTTCTGCAGTGTCCTaGCACTTTGCCCTCAGAGGG +
Preference number: 4 (lower is better)
Translates to: RPDKCSYNIYSSMPESNYCSAVS*HFALRG
Trigger: CCCTCTGAGGGCAAAGTGGCAGGACACTGCAGAACA...GTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATTTGTCTGGCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR GCA 90 bp CCTGTGTTTGGAAAAGAGTCGTACGGTGATTTTGGGAACATGAAGCTGTTCTGCAACATGAAGCTGTTCTaGAGTGTCCTGCCACTTTGC +
Preference number: 4 (lower is better)
Translates to: PVFGKESYGDFGNMKLFCNMKLF*SVLPLC
Trigger: GCAAAGTGGCAGGACACTGCAGAACAGCTTCATGTT...GCAGAACAGCTTCATGTTCCCAAAATCACCGTACGACTCTTTTCCAAACACAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000469607.3
CDS-3UTR GCA 90 bp AGTAACTACGACATGGTACTAGATTTACCCGTGTTGGGAAAACAGTCGTCCTGCAACATGAAGCTGTTCTaGAGTGTCCTGCCACTTTGC +
Preference number: 4 (lower is better)
Translates to: SNYDMVLDLPVLGKQSSCNMKLF*SVLPLC
Trigger: GCAAAGTGGCAGGACACTGCAGAACAGCTTCATGTT...GCAGGACGACTGTTTTCCCAACACGGGTAAATCTAGTACCATGTCGTAGTTACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000469607.3
CDS-3UTR GCA 90 bp AAAGCTTTGACTGGCTTCAGTTTCGCATTATTTGGTCTGTCCTGCTGGAAGGTTGATCACAGCTCCCAGTaGCAATGTCATTGTGTGGTC +
Preference number: 4 (lower is better)
Translates to: KALTGFSFALFGLSCWKVDHSSQ*QCHCVV
Trigger: GACCACACAATGACATTGGCACTGGGAGCTGTGATC...AACCTTCCAGCAGGACAGACCAAATAATGCGAAACTGAAGCCAGTCAAAGCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382269.7
ENST00000539820.5
ENST00000617910.3
ENST00000629774.2
CDS-3UTR GCA 90 bp GAAAGTGAGCCCTTAGTTTTGGAACCGGTTTGTACAAATGGAAGGCATCTTCATATCCTGTCCAACCACTaGGGTGGCAGCTGGAAACAT +
Preference number: 4 (lower is better)
Translates to: ESEPLVLEPVCTNGRHLHILSNH*GGSWKH
Trigger: ATGTTTCCAGCTGCCACCGCAGTGGTTGGACAGGAT...ATGAAGATGCCTTCCATTTGTACAAACCGGTTCCAAAACTAAGGGCTCACTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422464.5
ENST00000625793.2
CDS-3UTR GCA 90 bp ACTGTTCTGCTCTCTGCTTCTCTCAGTTCAAAAGTCAGACTTACACAAGTGAGTCCTCCCTTGGGGTTCTaGATACAAGGTAAGGGGGTA +
Preference number: 4 (lower is better)
Translates to: TVLLSASLSSKVRLTQVSPPLGF*IQGKGV
Trigger: TACCCCCTTACCTTGTATGCAGAACCCCAAGGGAGG...ACTCACTTGTGTAAGTCTGACTTTTGAACTGAGAGAAGCAGAGAGCAGAACAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000422464.5
ENST00000625793.2
CDS-3UTR GCA 90 bp AATTTTGAAACATGCGATCATTATGAGGAAGCGTGCGCCCCATGCCGTGCAGCACACTGTTCTGCTCTCTaGTTCTCTCAGTTCAAAAGT +
Preference number: 4 (lower is better)
Translates to: NFETCDHYEEACAPCRAAHCSAL*FSQFKS
Trigger: ACTTTTGAACTGAGAGAAGCAGAGAGCAGAACAGTG...TGCTGCACGGCATGGGGCGCACGCTTCCTCATAATGATCGCATGTTTCAAAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000422464.5
CDS-3UTR GCA 90 bp TATTCATCCATGCCTGAGAGTAACTACGACATGGTACTAGATTTACCCGTGTTGCGATCATGTTGGCAATaGCCCCCTCCTGTATGCAAG +
Preference number: 4 (lower is better)
Translates to: YSSMPESNYDMVLDLPVLRSCWQ*PPPVCK
Trigger: CTTGCATACAGGAGGGGGGCATTGCCAACATGATCG...CAACACGGGTAAATCTAGTACCATGTCGTAGTTACTCTCAGGCATGGATGAATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000422464.5
CDS-3UTR GCA 90 bp AGGCCAGACAAATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACAACGACCCTGGGCTCTaGTTATCTCCGAGGACAGGA +
Preference number: 4 (lower is better)
Translates to: RPDKCSYNIYSSMPESNYNDPGL*LSPRTG
Trigger: TCCTGTCCTCGGAGATAAGCAGAGCCCAGGGTCGTT...GTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATTTGTCTGGCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422464.5
CDS-3UTR CCA 90 bp AGTCACTTTGCCTTGTTGGTCCTTAAGGCTCCAGCCTCTCCCTCAGAATCACTTAATCACTCCGCTTGTTaGCTCAGGAAGTTTGGAAAA +
Preference number: 4 (lower is better)
Translates to: SHFALLVLKAPASPSESLNHSAC*LRKFGK
Trigger: TTTTCCAAACTTCCTGAGCCAACAAGCGGAGTGATT...AAGTGATTCTGAGGGAGAGGCTGGAGCCTTAAGGACCAACAAGGCAAAGTGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329066.9
ENST00000422464.5
CDS-3UTR CCA 90 bp TATTCATCCATGCCTGAGAGTAACTACGACATGGTACTAGATTTACCCGTGTTGTTTGCTGGTGCTCTGTaGTGTGAACGCGATGTCGTG +
Preference number: 4 (lower is better)
Translates to: YSSMPESNYDMVLDLPVLFAGAL*CERDVV
Trigger: CACGACATCGCGTTCACACCACAGAGCACCAGCAAA...CAACACGGGTAAATCTAGTACCATGTCGTAGTTACTCTCAGGCATGGATGAATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR CCA 90 bp GGCCAGACAAATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGTTTGCTGGTGCTCTGTaGTGTGAACGCGATGTCGTG +
Preference number: 4 (lower is better)
Translates to: GQTNAAITFIHPCLRVTTFAGAL*CERDVV
Trigger: CACGACATCGCGTTCACACCACAGAGCACCAGCAAA...CGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATTTGTCTGGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR CCA 90 bp AGTAACTACGACATGGTACTAGATTTACCCGTGTTGGGAAAACAGTCGTCCTGCCCTCCGGGAGTTGTATaGGAAAACATGGGTTTTGGT +
Preference number: 4 (lower is better)
Translates to: SNYDMVLDLPVLGKQSSCPPGVV*ENMGFG
Trigger: ACCAAAACCCATGTTTTCCCATACAACTCCCGGAGG...GCAGGACGACTGTTTTCCCAACACGGGTAAATCTAGTACCATGTCGTAGTTACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR CCA 90 bp ACTAGATTTACCCGTGTTGGGAAAACAGTCGTCCTGCTGATTTCGGATTTGCCTCCTCCGGGAGTTGTATaGGAAAACATGGGTTTTGGT +
Preference number: 4 (lower is better)
Translates to: TRFTRVGKTVVLLISDLPPPGVV*ENMGFG
Trigger: ACCAAAACCCATGTTTTCCCATACAACTCCCGGAGG...AGGCAAATCCGAAATCAGCAGGACGACTGTTTTCCCAACACGGGTAAATCTAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR CCA 90 bp GGTACTAGATTTACCCGTGTTGGGAAAACAGTCGTCCTGCTGATTTCGGATTTGCCTCCGGGAGTTGTATaGGAAAACATGGGTTTTGGT +
Preference number: 4 (lower is better)
Translates to: GTRFTRVGKTVVLLISDLPPGVV*ENMGFG
Trigger: ACCAAAACCCATGTTTTCCCATACAACTCCCGGAGG...CAAATCCGAAATCAGCAGGACGACTGTTTTCCCAACACGGGTAAATCTAGTACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR CCA 90 bp AAATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACATGGTACTCAGGGTGATGATCTaGTGCAGAGCGCCCACGACC +
Preference number: 4 (lower is better)
Translates to: KCSYNIYSSMPESNYDMVLRVMI*CRAPTT
Trigger: GGTCGTGGGCGCTCTGCACCAGATCATCACCCTGAG...TACCATGTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR CCA 90 bp AGGCCAGACAAATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACCAGTGGGGTTGGCGGTaGAGTCATAGCCTTCATAGG +
Preference number: 4 (lower is better)
Translates to: RPDKCSYNIYSSMPESNYQWGWR*SHSLHR
Trigger: CCTATGAAGGCTATGACTCCACCGCCAACCCCACTG...GTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATTTGTCTGGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR CCA 90 bp AATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACATGGTACAGCGGAAGGCGGCTGTaGAGAACACGTTGGACACAG +
Preference number: 4 (lower is better)
Translates to: NAAITFIHPCLRVTTTWYSGRRL*RTRWTQ
Trigger: CTGTGTCCAACGTGTTCTCCACAGCCGCCTTCCGCT...GTACCATGTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000446278.5
CDS-3UTR CCA 90 bp TGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACATGGTACTAAGCGGAAGGCGGCTGTaGAGAACACGTTGGACACAG +
Preference number: 4 (lower is better)
Translates to: CSYNIYSSMPESNYDMVLSGRRL*RTRWTQ
Trigger: CTGTGTCCAACGTGTTCTCCACAGCCGCCTTCCGCT...TAGTACCATGTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000446278.5
ENST00000469607.3
CDS-3UTR CCA 90 bp CCAGACAAATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACCACCTGCAGTTTGGCTaGTCTTGCAAGAAGGCCTCG +
Preference number: 4 (lower is better)
Translates to: PDKCSYNIYSSMPESNYDHLQFG*SCKKAS
Trigger: CGAGGCCTTCTTGCAAGACCAGCCAAACTGCAGGTG...GTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATTTGTCTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000422464.5
CDS-3UTR CCA 90 bp CAGACAAATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACAGCCCTGTCCGAGCCCTaGGGAGGAAGTTTTCAGCTA +
Preference number: 4 (lower is better)
Translates to: QTNAAITFIHPCLRVTTTALSEP*GGSFQL
Trigger: TAGCTGAAAACTTCCTCCCCAGGGCTCGGACAGGGC...TGTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATTTGTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000446278.5
CDS-3UTR CCA 90 bp AGGCCAGACAAATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGGGAATTTGCCGACTTaGAAGGCATCCATGGGCACC +
Preference number: 4 (lower is better)
Translates to: RPDKCSYNIYSSMPESNYGNLPT*KASMGT
Trigger: GGTGCCCATGGATGCCTTCCAAGTCGGCAAATTCCC...GTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATTTGTCTGGCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR CCA 90 bp CAGACAAATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACAGAGCAGCCAGCGACATaGAGATCCAAGTCACCCGAG +
Preference number: 4 (lower is better)
Translates to: QTNAAITFIHPCLRVTTTEQPAT*RSKSPE
Trigger: CTCGGGTGACTTGGATCTCCATGTCGCTGGCTGCTC...TGTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATTTGTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000446278.5
CDS-3UTR CCA 90 bp AAATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACATGGTAGAGGTCCCTACGGCCTaGTGCTTTCCGCATCTCAGC +
Preference number: 4 (lower is better)
Translates to: KCSYNIYSSMPESNYDMVEVPTA*CFPHLS
Trigger: GCTGAGATGCGGAAAGCACCAGGCCGTAGGGACCTC...TACCATGTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR CCA 90 bp GTGTTTGGAAAAGAGTCGTACGGTGATTTTGGGAACATGAAGCTGTTCTGCAGTAGAGATGCCAGAAGGTaGAGACAGGAGGATTGCAAG +
Preference number: 4 (lower is better)
Translates to: VFGKESYGDFGNMKLFCSRDARR*RQEDCK
Trigger: CTTGCAATCCTCCTGTCTCCACCTTCTGGCATCTCT...ACTGCAGAACAGCTTCATGTTCCCAAAATCACCGTACGACTCTTTTCCAAACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329066.9
ENST00000422464.5
CDS-3UTR CCA 90 bp GTGTCTGAGTTTGCTTTCAATGCCGAAGGACTCCTAACTATTGCCTTGCGTGAGGTGTTGGTGAATCTCTaGAGGATGAGACAAGTCACT +
Preference number: 4 (lower is better)
Translates to: VSEFAFNAEGLLTIALREVLVNL*RMRQVT
Trigger: AGTGACTTGTCTCATCCTCCAGAGATTCACCAACAC...CTCACGCAAGGCAATAGTTAGGAGTCCTTCGGCATTGAAAGCAAACTCAGACAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329066.9
ENST00000422464.5
CDS-3UTR CCA 90 bp AAAGAGTCGTACGGTGATTTTGGGAACATGAAGCTGTTCTGCAGTGTCCTGCCACACTGTTGTCATTCGTaGGTGAGATCATTCAGTGCT +
Preference number: 4 (lower is better)
Translates to: KESYGDFGNMKLFCSVLPHCCHS*VRSFSA
Trigger: AGCACTGAATGATCTCACCCACGAATGACAACAGTG...TGGCAGGACACTGCAGAACAGCTTCATGTTCCCAAAATCACCGTACGACTCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329066.9
ENST00000422464.5
CDS-3UTR CCA 90 bp GTGCTTCCAGCCGATCCTCAGATTAAGTGGAAGCAAACGCCTGAAAGTGAGCCCGGGAAAACAACAGTCTaGTATTTTTGGGTCACAAAA +
Preference number: 4 (lower is better)
Translates to: VLPADPQIKWKQTPESEPGKTTV*YFWVTK
Trigger: TTTTGTGACCCAAAAATACCAGACTGTTGTTTTCCC...GGGCTCACTTTCAGGCGTTTGCTTCCACTTAATCTGAGGATCGGCTGGAAGCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000422464.5
CDS-3UTR CCA 90 bp AGCAGGAACTCACTGCTGCCGGCTGAGGCCCTGGTCTTGAGGTTGTTAAAATGTGAGAAAAGCTTTGACTaGCTTCAGTTTCGCATTATT +
Preference number: 4 (lower is better)
Translates to: SRNSLLPAEALVLRLLKCEKSFD*LQFRII
Trigger: AATAATGCGAAACTGAAGCCAGTCAAAGCTTTTCTC...ACATTTTAACAACCTCAAGACCAGGGCCTCAGCCGGCAGCAGTGAGTTCCTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382269.7
ENST00000539820.5
ENST00000617910.3
ENST00000629774.2
CDS-3UTR CCA 90 bp ACGCCTGAAAGTGAGCCCTTAGTTTTGGAACCGGTTTGTACAAATGGAAGGCATAGCAGGCTCACATTCTaGCTCACTGTCATTAGCTTG +
Preference number: 4 (lower is better)
Translates to: TPESEPLVLEPVCTNGRHSRLTF*LTVISL
Trigger: CAAGCTAATGACAGTGAGCCAGAATGTGAGCCTGCT...ATGCCTTCCATTTGTACAAACCGGTTCCAAAACTAAGGGCTCACTTTCAGGCGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422464.5
ENST00000625793.2
CDS-3UTR CCA 90 bp CCTCTCCTGTGCTTCCAGCCGATCCTCAGATTAAGTGGAAGCAAACGCCTGAAATGCCCTTGCTGTGGCTaGAAAAGCTATTTAAATTCA +
Preference number: 4 (lower is better)
Translates to: PLLCFQPILRLSGSKRLKCPCCG*KSYLNS
Trigger: TGAATTTAAATAGCTTTTCCAGCCACAGCAAGGGCA...TTTCAGGCGTTTGCTTCCACTTAATCTGAGGATCGGCTGGAAGCACAGGAGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422464.5
CDS-3UTR TCA 90 bp ACAATGTGTGAAGCCTTGAACGTAGGAGATTTTAGATCCAGATGCTGTGAATTCCTTTCCCTCTCGAGATaGAGGGGAAGAAGGCTTCTG +
Preference number: 4 (lower is better)
Translates to: TMCEALNVGDFRSRCCEFLSLSR*RGRRLL
Trigger: CAGAAGCCTTCTTCCCCTTCATCTCGAGAGGGAAAG...GAATTCACAGCATCTGGATCTAAAATCTCCTACGTTCAAGGCTTCACACATTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382269.7
ENST00000539820.5
ENST00000617910.3
ENST00000629774.2
CDS-3UTR TCA 90 bp CTGTGCTTCCAGCCGATCCTCAGATTAAGTGGAAGCAAACGCCTGAAAGTGAGCTTTCATCGCTTGTATTaGTGTTTCCATTATCTCTGC +
Preference number: 4 (lower is better)
Translates to: LCFQPILRLSGSKRLKVSFHRLY*CFHYLC
Trigger: GCAGAGATAATGGAAACATCAATACAAGCGATGAAA...GCTCACTTTCAGGCGTTTGCTTCCACTTAATCTGAGGATCGGCTGGAAGCACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422464.5
ENST00000625793.2
CDS-3UTR TCA 90 bp GAATCAGGAAGCATCAAACCAAAGAAAGGTTCAGGCTCTACTGCAGGACCCAGGGGATGCTGTGATTGTTaGGTTTTCAGGTTGACTTTT +
Preference number: 4 (lower is better)
Translates to: ESGSIKPKKGSGSTAGPRGCCDC*VFRLTF
Trigger: AAAAGTCAACCTGAAAACTCAACAATCACAGCATCC...CCTGGGTCCTGCAGTAGAGCCTGAACCTTTCTTTGGTTTGATGCTTCCTGATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382269.7
ENST00000539820.5
ENST00000617910.3
ENST00000629774.2
CDS-3UTR TCA 90 bp TCACTGCTGCCGGCTGAGGCCCTGGTCTTGAGGTTGTTAAAATGTAAACTTAGGGGATGCTGTGATTGTTaGGTTTTCAGGTTGACTTTT +
Preference number: 4 (lower is better)
Translates to: SLLPAEALVLRLLKCKLRGCCDC*VFRLTF
Trigger: AAAAGTCAACCTGAAAACTCAACAATCACAGCATCC...CCTAAGTTTACATTTTAACAACCTCAAGACCAGGGCCTCAGCCGGCAGCAGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000382269.7
ENST00000539820.5
ENST00000617910.3
ENST00000629774.2
CDS-3UTR TCA 90 bp GAATCTCTGGAGGATGAGACAAGTCACTTTGCCTTGTTGGTCCTTAAGGCTCCAATCCGTTGGATGCTGTaGTTGTTGAGTTTTCAGGTT +
Preference number: 4 (lower is better)
Translates to: ESLEDETSHFALLVLKAPIRWML*LLSFQV
Trigger: AACCTGAAAACTCAACAATCACAGCATCCAACGGAT...TGGAGCCTTAAGGACCAACAAGGCAAAGTGACTTGTCTCATCCTCCAGAGATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329066.9
ENST00000422464.5
CDS-3UTR TCA 90 bp ACGCCTGAAAGTGAGCCCTTAGTTTTGGAACCGGTTTGTACAAATGGAAGGCATCAGACATGTTTGCAATaGTGCTCAGCAGATCTTCTG +
Preference number: 4 (lower is better)
Translates to: TPESEPLVLEPVCTNGRHQTCLQ*CSADLL
Trigger: CAGAAGATCTGCTGAGCATCATTGCAAACATGTCTG...ATGCCTTCCATTTGTACAAACCGGTTCCAAAACTAAGGGCTCACTTTCAGGCGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422464.5
ENST00000625793.2
CDS-3UTR TCA 90 bp TGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACATGGTACTAGTAATGTCCATGGGCTaGAGAAAGCCTGGTGCAGCC +
Preference number: 4 (lower is better)
Translates to: CSYNIYSSMPESNYDMVLVMSMG*RKPGAA
Trigger: GGCTGCACCAGGCTTTCTTCAGCCCATGGACATTAC...TAGTACCATGTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000446278.5
ENST00000469607.3
CDS-3UTR TCA 90 bp GACAAATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACATGCAGTGTTGTCACAGATaGCCCGAGACAGGGAGTGCT +
Preference number: 4 (lower is better)
Translates to: DKCSYNIYSSMPESNYDMQCCHR*PETGSA
Trigger: AGCACTCCCTGTCTCGGGTCATCTGTGACAACACTG...CATGTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATTTGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000446278.5
CDS-3UTR TCA 90 bp TTGCCTGTGTTTGGAAAAGAGTCGTACGGTGATTTTGGGAACATGAAGCTGTTCGTGATTTTGGGAACATaGAGCTGTTCTGCAGTGTCC +
Preference number: 4 (lower is better)
Translates to: LPVFGKESYGDFGNMKLFVILGT*SCSAVS
Trigger: GGACACTGCAGAACAGCTTCATGTTCCCAAAATCAC...GAACAGCTTCATGTTCCCAAAATCACCGTACGACTCTTTTCCAAACACAGGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000469607.3
CDS-3UTR TCA 90 bp CGACATGGTACTAGATTTACCCGTGTTGGGAAAACAGTCGTCCTGCTGATTTCGAAAAGAGTCGTACGGTaGTTTTGGGAACATGAAGCT +
Preference number: 4 (lower is better)
Translates to: RHGTRFTRVGKTVVLLISKRVVR*FWEHEA
Trigger: AGCTTCATGTTCCCAAAATCACCGTACGACTCTTTT...CGAAATCAGCAGGACGACTGTTTTCCCAACACGGGTAAATCTAGTACCATGTCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000469607.3
CDS-3UTR TCA 90 bp AAAGAGTCGTACGGTGATTTTGGGAACATGAAGCTGTTCTGCAGTGTCCTGCCAAAAAGAGTCGTACGGTaGTTTTGGGAACATGAAGCT +
Preference number: 4 (lower is better)
Translates to: KESYGDFGNMKLFCSVLPKRVVR*FWEHEA
Trigger: AGCTTCATGTTCCCAAAATCACCGTACGACTCTTTT...TGGCAGGACACTGCAGAACAGCTTCATGTTCCCAAAATCACCGTACGACTCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000469607.3
CDS-3UTR TCA 90 bp TTTGGAAAAGAGTCGTACGGTGATTTTGGGAACATGAAGCTGTTCTGCAGTGTCAAACAGTCGTCCTGCTaGTTTCGGATTTGCCTGTGT +
Preference number: 4 (lower is better)
Translates to: FGKESYGDFGNMKLFCSVKQSSC*FRICLC
Trigger: ACACAGGCAAATCCGAAATCAGCAGGACGACTGTTT...GACACTGCAGAACAGCTTCATGTTCCCAAAATCACCGTACGACTCTTTTCCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000469607.3
CDS-3UTR TCA 90 bp GTGTTTGGAAAAGAGTCGTACGGTGATTTTGGGAACATGAAGCTGTTCTGCAGTCAGGTCAGATGTGTCTaGGTTTGCTTTCAATGCCGA +
Preference number: 4 (lower is better)
Translates to: VFGKESYGDFGNMKLFCSQVRCV*VCFQCR
Trigger: TCGGCATTGAAAGCAAACTCAGACACATCTGACCTG...ACTGCAGAACAGCTTCATGTTCCCAAAATCACCGTACGACTCTTTTCCAAACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329066.9
ENST00000422464.5
CDS-3UTR TCA 90 bp GTTGGTGAATCTCTGGAGGATGAGACAAGTCACTTTGCCTTGTTGGTCCTTAAGGATCTAATCTCACACTaGATTTCAGAAGGGAGACCG +
Preference number: 4 (lower is better)
Translates to: VGESLEDETSHFALLVLKDLISH*ISEGRP
Trigger: CGGTCTCCCTTCTGAAATTCAGTGTGAGATTAGATC...CTTAAGGACCAACAAGGCAAAGTGACTTGTCTCATCCTCCAGAGATTCACCAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422464.5
CDS-3UTR GCA 90 bp TATTCATCCATGCCTGAGAGTAACTACGACATGGTACTAGATTTACCCGTGTTGTTCTTGAGGTTTCTCTaGATCGTGGCGTACATGGCG +
Preference number: 4 (lower is better)
Translates to: YSSMPESNYDMVLDLPVLFLRFL*IVAYMA
Trigger: CGCCATGTACGCCACGATGCAGAGAAACCTCAAGAA...CAACACGGGTAAATCTAGTACCATGTCGTAGTTACTCTCAGGCATGGATGAATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
CDS-3UTR GCA 90 bp TATTCATCCATGCCTGAGAGTAACTACGACATGGTACTAGATTTACCCGTGTTGTTCCATTATCTCTGCTaGTCGGGCAATCACTCCGCT +
Preference number: 4 (lower is better)
Translates to: YSSMPESNYDMVLDLPVLFHYLC*SGNHSA
Trigger: AGCGGAGTGATTGCCCGAGCAGCAGAGATAATGGAA...CAACACGGGTAAATCTAGTACCATGTCGTAGTTACTCTCAGGCATGGATGAATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR GCA 90 bp GAATCTCTGGAGGATGAGACAAGTCACTTTGCCTTGTTGGTCCTTAAGGCTCCAACATCCAGACATGTTTaGAATGATGCTCAGCAGATC +
Preference number: 4 (lower is better)
Translates to: ESLEDETSHFALLVLKAPTSRHV*NDAQQI
Trigger: GATCTGCTGAGCATCATTGCAAACATGTCTGGATGT...TGGAGCCTTAAGGACCAACAAGGCAAAGTGACTTGTCTCATCCTCCAGAGATTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329066.9
ENST00000422464.5
CDS-3UTR GCA 90 bp GGCCAGACAAATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACGCCAGATCCAAGGTaGTGGAATTGGACAGCACAA +
Preference number: 4 (lower is better)
Translates to: GQTNAAITFIHPCLRVTTTPDPR*WNWTAQ
Trigger: TTGTGCTGTCCAATTCCAGCACCTTGGATCTGGCGT...CGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATTTGTCTGGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000422464.5
CDS-3UTR GCA 90 bp ACTGTTCTGCTCTCTGCTTCTCTCAGTTCAAAAGTCAGACTTACACAAGTGAGTACGCCAGATCCAAGGTaGTGGAATTGGACAGCACAA +
Preference number: 4 (lower is better)
Translates to: TVLLSASLSSKVRLTQVSTPDPR*WNWTAQ
Trigger: TTGTGCTGTCCAATTCCAGCACCTTGGATCTGGCGT...ACTCACTTGTGTAAGTCTGACTTTTGAACTGAGAGAAGCAGAGAGCAGAACAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422464.5
ENST00000625793.2
CDS-3UTR GCA 90 bp AGTAACTACGACATGGTACTAGATTTACCCGTGTTGGGAAAACAGTCGTCCTGCTCGATGTTGTCAGGATaGTTGTACAAGTCCAGGATC +
Preference number: 4 (lower is better)
Translates to: SNYDMVLDLPVLGKQSSCSMLSG*LYKSRI
Trigger: GATCCTGGACTTGTACAAGCATCCTGACAACATCGA...GCAGGACGACTGTTTTCCCAACACGGGTAAATCTAGTACCATGTCGTAGTTACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000469607.3
CDS-3UTR GCA 90 bp CTACGACATGGTACTAGATTTACCCGTGTTGGGAAAACAGTCGTCCTGCTGATTTCGATGTTGTCAGGATaGTTGTACAAGTCCAGGATC +
Preference number: 4 (lower is better)
Translates to: LRHGTRFTRVGKTVVLLISMLSG*LYKSRI
Trigger: GATCCTGGACTTGTACAAGCATCCTGACAACATCGA...AATCAGCAGGACGACTGTTTTCCCAACACGGGTAAATCTAGTACCATGTCGTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000469607.3
CDS-3UTR GCA 90 bp AGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACATGGTACTAGATCAGCTCACGCCTCTGTaGATCCGTGAAGACGTGGCT +
Preference number: 4 (lower is better)
Translates to: SYNIYSSMPESNYDMVLDQLTPL*IREDVA
Trigger: AGCCACGTCTTCACGGATGCACAGAGGCGTGAGCTG...ATCTAGTACCATGTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000446278.5
ENST00000469607.3
CDS-3UTR GCA 90 bp ACTGTTCTGCTCTCTGCTTCTCTCAGTTCAAAAGTCAGACTTACACAAGTGAGTAGTCTTCGGGGAATTTaGCGACTTGGAAGGCATCCA +
Preference number: 4 (lower is better)
Translates to: TVLLSASLSSKVRLTQVSSLRGI*RLGRHP
Trigger: TGGATGCCTTCCAAGTCGGCAAATTCCCCGAAGACT...ACTCACTTGTGTAAGTCTGACTTTTGAACTGAGAGAAGCAGAGAGCAGAACAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422464.5
ENST00000625793.2
CDS-3UTR GCA 90 bp AAATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACATGGTATGGAGCTCATACCCGTaGCGGCAGGAATACACCAGC +
Preference number: 4 (lower is better)
Translates to: KCSYNIYSSMPESNYDMVWSSYP*RQEYTS
Trigger: GCTGGTGTATTCCTGCCGGCACGGGTATGAGCTCCA...TACCATGTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000446278.5
CDS-3UTR GCA 90 bp AGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACATGGTACTAGATTGGAGCTCATACCCGTaGCGGCAGGAATACACCAGC +
Preference number: 4 (lower is better)
Translates to: SYNIYSSMPESNYDMVLDWSSYP*RQEYTS
Trigger: GCTGGTGTATTCCTGCCGGCACGGGTATGAGCTCCA...ATCTAGTACCATGTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000446278.5
ENST00000469607.3
CDS-3UTR GCA 90 bp ACAAATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACATGGGGGGTGGGCACCGTCTaGACACTCGTTCACATCTTT +
Preference number: 4 (lower is better)
Translates to: TNAAITFIHPCLRVTTTWGVGTV*TLVHIF
Trigger: AAAGATGTGAACGAGTGTGCAGACGGTGCCCACCCC...CCATGTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATTTGT
46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000382201.7
ENST00000446278.5
CDS-3UTR GCA 90 bp CAGACAAATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACATGTTCTGCAGTGTCCTaGCACTTTGCCCTCAGAGGG +
Preference number: 4 (lower is better)
Translates to: QTNAAITFIHPCLRVTTTCSAVS*HFALRG
Trigger: CCCTCTGAGGGCAAAGTGGCAGGACACTGCAGAACA...TGTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATTTGTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000446278.5
CDS-3UTR GCA 90 bp TGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACATGGTACTATGTTCTGCAGTGTCCTaGCACTTTGCCCTCAGAGGG +
Preference number: 4 (lower is better)
Translates to: CSYNIYSSMPESNYDMVLCSAVS*HFALRG
Trigger: CCCTCTGAGGGCAAAGTGGCAGGACACTGCAGAACA...TAGTACCATGTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000446278.5
ENST00000469607.3
CDS-3UTR GCA 90 bp AGGCCAGACAAATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACATCCTGTCCAACCACTaGGGTGGCAGCTGGAAACAT +
Preference number: 4 (lower is better)
Translates to: RPDKCSYNIYSSMPESNYILSNH*GGSWKH
Trigger: ATGTTTCCAGCTGCCACCGCAGTGGTTGGACAGGAT...GTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATTTGTCTGGCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422464.5
CDS-3UTR GCA 90 bp GAAAGTGAGCCCTTAGTTTTGGAACCGGTTTGTACAAATGGAAGGCATCTTCATTGGAGGCCACTGTTCTaGTCTCTGCTTCTCTCAGTT +
Preference number: 4 (lower is better)
Translates to: ESEPLVLEPVCTNGRHLHWRPLF*SLLLSV
Trigger: AACTGAGAGAAGCAGAGAGCAGAACAGTGGCCTCCA...ATGAAGATGCCTTCCATTTGTACAAACCGGTTCCAAAACTAAGGGCTCACTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422464.5
ENST00000625793.2
CDS-3UTR GCA 90 bp CCAGACAAATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACTGGCTTCCGGACAAATaGTTGTTTGCAGGAGGCCAC +
Preference number: 4 (lower is better)
Translates to: PDKCSYNIYSSMPESNYDWLPDK*LFAGGH
Trigger: GTGGCCTCCTGCAAACAAGCATTTGTCCGGAAGCCA...GTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATTTGTCTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422464.5
CDS-3UTR GCA 90 bp TTTGGAAAAGAGTCGTACGGTGATTTTGGGAACATGAAGCTGTTCTGCAGTGTCATGAGCCATCCTTCTTaGTTGTCATGCTGGAGGGAA +
Preference number: 4 (lower is better)
Translates to: FGKESYGDFGNMKLFCSVMSHPS*LSCWRE
Trigger: TTCCCTCCAGCATGACAAGCAAGAAGGATGGCTCAT...GACACTGCAGAACAGCTTCATGTTCCCAAAATCACCGTACGACTCTTTTCCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422464.5
CDS-3UTR CCA 90 bp ATGTGTGAAGCCTTGAACGTAGGAGATTTTAGATCCAGATGCTGTGAATTCTTAGGTTTCTCTGCATCGTaGCGTACATGGCGGTGTCCA +
Preference number: 4 (lower is better)
Translates to: MCEALNVGDFRSRCCEFLGFSAS*RTWRCP
Trigger: TGGACACCGCCATGTACGCCACGATGCAGAGAAACC...TAAGAATTCACAGCATCTGGATCTAAAATCTCCTACGTTCAAGGCTTCACACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382269.7
ENST00000539820.5
ENST00000617910.3
ENST00000629774.2
CDS-3UTR CCA 90 bp ACACAGAACAGGATGGCCTGGCACCTAGGGAAAACAACAGTCTGGTATTTTTGGAGACAGAAGCTGAGCTaGAGAAAGGATTCCTCTTTT +
Preference number: 4 (lower is better)
Translates to: TQNRMAWHLGKTTVWYFWRQKLS*RKDSSF
Trigger: AAAAGAGGAATCCTTTCTCCAGCTCAGCTTCTGTCT...CCAAAAATACCAGACTGTTGTTTTCCCTAGGTGCCAGGCCATCCTGTTCTGTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329066.9
CDS-3UTR CCA 90 bp AAAGAGTCGTACGGTGATTTTGGGAACATGAAGCTGTTCTGCAGTGTCCTGCCAAATCACTCCGCTTGTTaGCTCAGGAAGTTTGGAAAA +
Preference number: 4 (lower is better)
Translates to: KESYGDFGNMKLFCSVLPNHSAC*LRKFGK
Trigger: TTTTCCAAACTTCCTGAGCCAACAAGCGGAGTGATT...TGGCAGGACACTGCAGAACAGCTTCATGTTCCCAAAATCACCGTACGACTCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR CCA 90 bp AATCTCTGGAGGATGAGACAAGTCACTTTGCCTTGTTGGTCCTTAAGGCTCCAGAATCACTCCGCTTGTTaGCTCAGGAAGTTTGGAAAA +
Preference number: 4 (lower is better)
Translates to: NLWRMRQVTLPCWSLRLQNHSAC*LRKFGK
Trigger: TTTTCCAAACTTCCTGAGCCAACAAGCGGAGTGATT...CTGGAGCCTTAAGGACCAACAAGGCAAAGTGACTTGTCTCATCCTCCAGAGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329066.9
ENST00000422464.5
CDS-3UTR CCA 90 bp TGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACATGGTACTACGCCAGGCAAGTGTTTaGGCATTTTGGGGGCAGCAT +
Preference number: 4 (lower is better)
Translates to: CSYNIYSSMPESNYDMVLRQASV*AFWGQH
Trigger: ATGCTGCCCCCAAAATGCCCAAACACTTGCCTGGCG...TAGTACCATGTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR CCA 90 bp CCTGTGCTTCCAGCCGATCCTCAGATTAAGTGGAAGCAAACGCCTGAAAGTGAGTTGTATGGGAAAACATaGGTTTTGGTTCTCACAAGT +
Preference number: 4 (lower is better)
Translates to: PVLPADPQIKWKQTPESELYGKT*VLVLTS
Trigger: ACTTGTGAGAACCAAAACCCATGTTTTCCCATACAA...CTCACTTTCAGGCGTTTGCTTCCACTTAATCTGAGGATCGGCTGGAAGCACAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422464.5
ENST00000625793.2
CDS-3UTR CCA 90 bp ACAAATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACATGGCAGTGGGGTTGGCGGTaGAGTCATAGCCTTCATAGG +
Preference number: 4 (lower is better)
Translates to: TNAAITFIHPCLRVTTTWQWGWR*SHSLHR
Trigger: CCTATGAAGGCTATGACTCCACCGCCAACCCCACTG...CCATGTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000446278.5
CDS-3UTR CCA 90 bp GACAAATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACATGCAGTGGGGTTGGCGGTaGAGTCATAGCCTTCATAGG +
Preference number: 4 (lower is better)
Translates to: DKCSYNIYSSMPESNYDMQWGWR*SHSLHR
Trigger: CCTATGAAGGCTATGACTCCACCGCCAACCCCACTG...CATGTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATTTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000446278.5
CDS-3UTR CCA 90 bp AGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACATGGTACTAGATCTGTGGAGAACACGTTaGACACAGTGGGGTTGGCGG +
Preference number: 4 (lower is better)
Translates to: SYNIYSSMPESNYDMVLDLWRTR*TQWGWR
Trigger: CCGCCAACCCCACTGTGTCCAACGTGTTCTCCACAG...ATCTAGTACCATGTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000446278.5
ENST00000469607.3
CDS-3UTR CCA 90 bp AAATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACATGGTAAGCGGAAGGCGGCTGTaGAGAACACGTTGGACACAG +
Preference number: 4 (lower is better)
Translates to: KCSYNIYSSMPESNYDMVSGRRL*RTRWTQ
Trigger: CTGTGTCCAACGTGTTCTCCACAGCCGCCTTCCGCT...TACCATGTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000446278.5
CDS-3UTR CCA 90 bp GTGTTTGGAAAAGAGTCGTACGGTGATTTTGGGAACATGAAGCTGTTCTGCAGTCCAAGGTGCTGGAATTaGACAGCACAAAGAGCCTTT +
Preference number: 4 (lower is better)
Translates to: VFGKESYGDFGNMKLFCSPRCWN*TAQRAF
Trigger: AAAGGCTCTTTGTGCTGTCCAATTCCAGCACCTTGG...ACTGCAGAACAGCTTCATGTTCCCAAAATCACCGTACGACTCTTTTCCAAACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000422464.5
CDS-3UTR CCA 90 bp TTTGGAAAAGAGTCGTACGGTGATTTTGGGAACATGAAGCTGTTCTGCAGTGTCCCAGATCCAAGGTGCTaGAATTGGACAGCACAAAGA +
Preference number: 4 (lower is better)
Translates to: FGKESYGDFGNMKLFCSVPDPRC*NWTAQR
Trigger: TCTTTGTGCTGTCCAATTCCAGCACCTTGGATCTGG...GACACTGCAGAACAGCTTCATGTTCCCAAAATCACCGTACGACTCTTTTCCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000422464.5
CDS-3UTR CCA 90 bp TTGCCTGTGTTTGGAAAAGAGTCGTACGGTGATTTTGGGAACATGAAGCTGTTCCCAGATCCAAGGTGCTaGAATTGGACAGCACAAAGA +
Preference number: 4 (lower is better)
Translates to: LPVFGKESYGDFGNMKLFPDPRC*NWTAQR
Trigger: TCTTTGTGCTGTCCAATTCCAGCACCTTGGATCTGG...GAACAGCTTCATGTTCCCAAAATCACCGTACGACTCTTTTCCAAACACAGGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000422464.5
CDS-3UTR CCA 90 bp AGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACATGGTACTAGATGCCCTGTCCGAGCCCTaGGGAGGAAGTTTTCAGCTA +
Preference number: 4 (lower is better)
Translates to: SYNIYSSMPESNYDMVLDALSEP*GGSFQL
Trigger: TAGCTGAAAACTTCCTCCCCAGGGCTCGGACAGGGC...ATCTAGTACCATGTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000446278.5
ENST00000469607.3
CDS-3UTR CCA 90 bp AGGCCAGACAAATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGCATCCGTGAAGACGTaGCTGTTCTCCCACCAAAAC +
Preference number: 4 (lower is better)
Translates to: RPDKCSYNIYSSMPESNYASVKT*LFSHQN
Trigger: GTTTTGGTGGGAGAACAGCCACGTCTTCACGGATGC...GTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATTTGTCTGGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR CCA 90 bp CAGACAAATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACAGGGAATTTGCCGACTTaGAAGGCATCCATGGGCACC +
Preference number: 4 (lower is better)
Translates to: QTNAAITFIHPCLRVTTTGNLPT*KASMGT
Trigger: GGTGCCCATGGATGCCTTCCAAGTCGGCAAATTCCC...TGTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATTTGTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000446278.5
CDS-3UTR CCA 90 bp CCAGACAAATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACAAATCCCATCCTTCCTaGGTGCAAGTGAGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: PDKCSYNIYSSMPESNYDKSHPS*VQVSCS
Trigger: GGAGCAGCTCACTTGCACCCAGGAAGGATGGGATTT...GTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATTTGTCTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000446278.5
CDS-3UTR CCA 90 bp ACAAATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACATGGACTGGAAGCCGCCTTTaGTGTTTCTGCACCTCGCAG +
Preference number: 4 (lower is better)
Translates to: TNAAITFIHPCLRVTTTWTGSRL*CFCTSQ
Trigger: CTGCGAGGTGCAGAAACACCAAAGGCGGCTTCCAGT...CCATGTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000382201.7
ENST00000446278.5
CDS-3UTR CCA 90 bp TGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACATGGTACTATCCGCGCAGAGACACTaGAAGCCGCCTTTGGTGTTT +
Preference number: 4 (lower is better)
Translates to: CSYNIYSSMPESNYDMVLSAQRH*KPPLVF
Trigger: AAACACCAAAGGCGGCTTCCAGTGTCTCTGCGCGGA...TAGTACCATGTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000382201.7
ENST00000446278.5
CDS-3UTR CCA 90 bp TTTGGAAAAGAGTCGTACGGTGATTTTGGGAACATGAAGCTGTTCTGCAGTGTCGGAGGATTGCAAGAGTaGTGTTTCCAGGGTTCACAA +
Preference number: 4 (lower is better)
Translates to: FGKESYGDFGNMKLFCSVGGLQE*CFQGSQ
Trigger: TTGTGAACCCTGGAAACACCACTCTTGCAATCCTCC...GACACTGCAGAACAGCTTCATGTTCCCAAAATCACCGTACGACTCTTTTCCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329066.9
ENST00000422464.5
CDS-3UTR CCA 90 bp AGACAGGAGGATTGCAAGAGTGGTGTTTCCAGGGTTCACAAAATAAAGATGTGTGTCACTTTGCCTTGTTaGTCCTTAAGGCTCCAGCCT +
Preference number: 4 (lower is better)
Translates to: RQEDCKSGVSRVHKIKMCVTLPC*SLRLQP
Trigger: AGGCTGGAGCCTTAAGGACCAACAAGGCAAAGTGAC...ACACATCTTTATTTTGTGAACCCTGGAAACACCACTCTTGCAATCCTCCTGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329066.9
ENST00000422464.5
CDS-3UTR CCA 90 bp TGGAGAAAAGCTTTGACTGGCTTCAGTTTCGCATTATTTGGTCTGTCCTGCTGGCAGTTTCGCATTATTTaGTCTGTCCTGCTGGAAGGT +
Preference number: 4 (lower is better)
Translates to: WRKALTGFSFALFGLSCWQFRII*SVLLEG
Trigger: ACCTTCCAGCAGGACAGACCAAATAATGCGAAACTG...CCAGCAGGACAGACCAAATAATGCGAAACTGAAGCCAGTCAAAGCTTTTCTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382269.7
ENST00000539820.5
ENST00000617910.3
ENST00000629774.2
CDS-3UTR CCA 90 bp TTGCCTGTGTTTGGAAAAGAGTCGTACGGTGATTTTGGGAACATGAAGCTGTTCTCTTGCTTGTCATGCTaGAGGGAAGTTTCTGGCTTC +
Preference number: 4 (lower is better)
Translates to: LPVFGKESYGDFGNMKLFSCLSC*REVSGF
Trigger: GAAGCCAGAAACTTCCCTCCAGCATGACAAGCAAGA...GAACAGCTTCATGTTCCCAAAATCACCGTACGACTCTTTTCCAAACACAGGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422464.5
3UTR CAA 72 bp CGTGTTGGGAAAACAGTCGTCCTGCTGATTTCGGATTaGCCTGTGTTTGGAAAAGAGTCGTACGGTGATTTT +
Preference number: 4 (lower is better)
Translates to: RVGKTVVLLISD*PVFGKESYGDF
Trigger: AAAATCACCGTACGACTCTTTTCCAAACACAGGCAAATCCGAAATCAGCAGGACGACTGTTTTCCCAACACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000469607.3
CDS-3UTR TCA 90 bp AATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACATGGTACCTTTCCCTCTCGAGATaGAGGGGAAGAAGGCTTCTG +
Preference number: 4 (lower is better)
Translates to: NAAITFIHPCLRVTTTWYLSLSR*RGRRLL
Trigger: CAGAAGCCTTCTTCCCCTTCATCTCGAGAGGGAAAG...GTACCATGTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
CDS-3UTR TCA 90 bp GGCCAGACAAATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGGGATTCCTCTTTTCTTaGGGTTTCTCTGCATCGTGG +
Preference number: 4 (lower is better)
Translates to: GQTNAAITFIHPCLRVTTGFLFS*GFSASW
Trigger: CCACGATGCAGAGAAACCTCAAGAAAAGAGGAATCC...CGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATTTGTCTGGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
CDS-3UTR TCA 90 bp GAATCAGGAAGCATCAAACCAAAGAAAGGTTCAGGCTCTACTGCAGGACCCAGGTTTCATCGCTTGTATTaGTGTTTCCATTATCTCTGC +
Preference number: 4 (lower is better)
Translates to: ESGSIKPKKGSGSTAGPRFHRLY*CFHYLC
Trigger: GCAGAGATAATGGAAACATCAATACAAGCGATGAAA...CCTGGGTCCTGCAGTAGAGCCTGAACCTTTCTTTGGTTTGATGCTTCCTGATTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382269.7
ENST00000539820.5
ENST00000617910.3
ENST00000629774.2
CDS-3UTR TCA 90 bp GAGGCTCATGTGTTGGTGAATCTCTGGAGGATGAGACAAGTCACTTTGCCTTGTGGATGCTGTGATTGTTaGGTTTTCAGGTTGACTTTT +
Preference number: 4 (lower is better)
Translates to: EAHVLVNLWRMRQVTLPCGCCDC*VFRLTF
Trigger: AAAAGTCAACCTGAAAACTCAACAATCACAGCATCC...ACAAGGCAAAGTGACTTGTCTCATCCTCCAGAGATTCACCAACACATGAGCCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329066.9
ENST00000422464.5
CDS-3UTR TCA 90 bp TCATCCATGCCTGAGAGTAACTACGACATGGTACTAGATTTACCCGTGTTGGGAATCCGTTGGATGCTGTaGTTGTTGAGTTTTCAGGTT +
Preference number: 4 (lower is better)
Translates to: SSMPESNYDMVLDLPVLGIRWML*LLSFQV
Trigger: AACCTGAAAACTCAACAATCACAGCATCCAACGGAT...TCCCAACACGGGTAAATCTAGTACCATGTCGTAGTTACTCTCAGGCATGGATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR TCA 90 bp GTGTTTGGAAAAGAGTCGTACGGTGATTTTGGGAACATGAAGCTGTTCTGCAGTCAGACATGTTTGCAATaGTGCTCAGCAGATCTTCTG +
Preference number: 4 (lower is better)
Translates to: VFGKESYGDFGNMKLFCSQTCLQ*CSADLL
Trigger: CAGAAGATCTGCTGAGCATCATTGCAAACATGTCTG...ACTGCAGAACAGCTTCATGTTCCCAAAATCACCGTACGACTCTTTTCCAAACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR TCA 90 bp CCTGAGAGTAACTACGACATGGTACTAGATTTACCCGTGTTGGGAAAACAGTCGAGCGGTCATCATCTGTaGCAACCTCATTTGAAACTT +
Preference number: 4 (lower is better)
Translates to: PESNYDMVLDLPVLGKQSSGHHL*QPHLKL
Trigger: AAGTTTCAAATGAGGTTGTCACAGATGATGACCGCT...CGACTGTTTTCCCAACACGGGTAAATCTAGTACCATGTCGTAGTTACTCTCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR TCA 90 bp CAGACAAATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACATCCTCGTTCATCAGCTaGTCCTGCACCTGCAGTTTG +
Preference number: 4 (lower is better)
Translates to: QTNAAITFIHPCLRVTTTSSFIS*SCTCSL
Trigger: CAAACTGCAGGTGCAGGATCAGCTGATGAACGAGGA...TGTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATTTGTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000422464.5
CDS-3UTR TCA 90 bp AGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACATGGTACTAGATCAGTGTTGTCACAGATaGCCCGAGACAGGGAGTGCT +
Preference number: 4 (lower is better)
Translates to: SYNIYSSMPESNYDMVLDQCCHR*PETGSA
Trigger: AGCACTCCCTGTCTCGGGTCATCTGTGACAACACTG...ATCTAGTACCATGTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000446278.5
ENST00000469607.3
CDS-3UTR TCA 90 bp GGCCAGACAAATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGGTGATTTTGGGAACATaGAGCTGTTCTGCAGTGTCC +
Preference number: 4 (lower is better)
Translates to: GQTNAAITFIHPCLRVTTVILGT*SCSAVS
Trigger: GGACACTGCAGAACAGCTTCATGTTCCCAAAATCAC...CGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATTTGTCTGGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000446278.5
CDS-3UTR TCA 90 bp CTACGACATGGTACTAGATTTACCCGTGTTGGGAAAACAGTCGTCCTGCTGATTAAAAGAGTCGTACGGTaGTTTTGGGAACATGAAGCT +
Preference number: 4 (lower is better)
Translates to: LRHGTRFTRVGKTVVLLIKRVVR*FWEHEA
Trigger: AGCTTCATGTTCCCAAAATCACCGTACGACTCTTTT...AATCAGCAGGACGACTGTTTTCCCAACACGGGTAAATCTAGTACCATGTCGTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000469607.3
CDS-3UTR TCA 90 bp AGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACATGGTACTAGATCAGAAGCCTGGGGTCTaGGGCTCATGTGTTGGTGAA +
Preference number: 4 (lower is better)
Translates to: SYNIYSSMPESNYDMVLDQKPGV*GSCVGE
Trigger: TTCACCAACACATGAGCCTCAGACCCCAGGCTTCTG...ATCTAGTACCATGTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329066.9
ENST00000422464.5
CDS-3UTR TCA 90 bp TCACTGCTGCCGGCTGAGGCCCTGGTCTTGAGGTTGTTAAAATGTAAACTTAGGAGTGATCATGATTTATaGATCAGGAAGCATCAAACC +
Preference number: 4 (lower is better)
Translates to: SLLPAEALVLRLLKCKLRSDHDL*IRKHQT
Trigger: GGTTTGATGCTTCCTGATTCATAAATCATGATCACT...CCTAAGTTTACATTTTAACAACCTCAAGACCAGGGCCTCAGCCGGCAGCAGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382269.7
ENST00000539820.5
ENST00000617910.3
ENST00000629774.2
CDS-3UTR TCA 90 bp GAATCAGGAAGCATCAAACCAAAGAAAGGTTCAGGCTCTACTGCAGGACCCAGGAGTGATCATGATTTATaGATCAGGAAGCATCAAACC +
Preference number: 4 (lower is better)
Translates to: ESGSIKPKKGSGSTAGPRSDHDL*IRKHQT
Trigger: GGTTTGATGCTTCCTGATTCATAAATCATGATCACT...CCTGGGTCCTGCAGTAGAGCCTGAACCTTTCTTTGGTTTGATGCTTCCTGATTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382269.7
ENST00000539820.5
ENST00000617910.3
ENST00000629774.2
CDS-3UTR TCA 90 bp AAAGCTTTGACTGGCTTCAGTTTCGCATTATTTGGTCTGTCCTGCTGGAAGGTTGTGGAATACAATGTGTaGAGCCTTGAACGTAGGAGA +
Preference number: 4 (lower is better)
Translates to: KALTGFSFALFGLSCWKVVEYNV*SLERRR
Trigger: TCTCCTACGTTCAAGGCTTCACACATTGTATTCCAC...AACCTTCCAGCAGGACAGACCAAATAATGCGAAACTGAAGCCAGTCAAAGCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382269.7
ENST00000539820.5
ENST00000617910.3
ENST00000629774.2
CDS-3UTR GCA 90 bp ACAATGTGTGAAGCCTTGAACGTAGGAGATTTTAGATCCAGATGCTGTGAATTCTTCTTGAGGTTTCTCTaGATCGTGGCGTACATGGCG +
Preference number: 4 (lower is better)
Translates to: TMCEALNVGDFRSRCCEFFLRFL*IVAYMA
Trigger: CGCCATGTACGCCACGATGCAGAGAAACCTCAAGAA...GAATTCACAGCATCTGGATCTAAAATCTCCTACGTTCAAGGCTTCACACATTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382269.7
ENST00000539820.5
ENST00000617910.3
ENST00000629774.2
CDS-3UTR GCA 90 bp TTTGGAAAAGAGTCGTACGGTGATTTTGGGAACATGAAGCTGTTCTGCAGTGTCGATGTATTGTCCCCATaGCATCAGGAGGTCAGAATA +
Preference number: 4 (lower is better)
Translates to: FGKESYGDFGNMKLFCSVDVLSP*HQEVRI
Trigger: TATTCTGACCTCCTGATGGCATGGGGACAATACATC...GACACTGCAGAACAGCTTCATGTTCCCAAAATCACCGTACGACTCTTTTCCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR GCA 90 bp AAGCAAACGCCTGAAAGTGAGCCCTTAGTTTTGGAACCGGTTTGTACAAATGGAGATGTATTGTCCCCATaGCATCAGGAGGTCAGAATA +
Preference number: 4 (lower is better)
Translates to: KQTPESEPLVLEPVCTNGDVLSP*HQEVRI
Trigger: TATTCTGACCTCCTGATGGCATGGGGACAATACATC...TCCATTTGTACAAACCGGTTCCAAAACTAAGGGCTCACTTTCAGGCGTTTGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422464.5
ENST00000625793.2
CDS-3UTR GCA 90 bp ACAAATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACATGGCGCAGAGCCTTCATCTaGTTCCCAATGAGACAGGCA +
Preference number: 4 (lower is better)
Translates to: TNAAITFIHPCLRVTTTWRRAFI*FPMRQA
Trigger: TGCCTGTCTCATTGGGAAGCAGATGAAGGCTCTGCG...CCATGTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000446278.5
CDS-3UTR GCA 90 bp TGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACATGGTACTACGCAGAGCCTTCATCTaGTTCCCAATGAGACAGGCA +
Preference number: 4 (lower is better)
Translates to: CSYNIYSSMPESNYDMVLRRAFI*FPMRQA
Trigger: TGCCTGTCTCATTGGGAAGCAGATGAAGGCTCTGCG...TAGTACCATGTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000446278.5
ENST00000469607.3
CDS-3UTR GCA 90 bp CAGACAAATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACACCAGACTCCTCACAGTaGACAAAGTCCCCATTCTCC +
Preference number: 4 (lower is better)
Translates to: QTNAAITFIHPCLRVTTTPDSSQ*TKSPFS
Trigger: GGAGAATGGGGACTTTGTGCACTGTGAGGAGTCTGG...TGTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATTTGTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000446278.5
CDS-3UTR GCA 90 bp GGCCAGACAAATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACTCGTTCACATCTTTaGAGAGGGGAGGCTGGAAAT +
Preference number: 4 (lower is better)
Translates to: GQTNAAITFIHPCLRVTTTRSHL*RGEAGN
Trigger: ATTTCCAGCCTCCCCTCTGCAAAGATGTGAACGAGT...CGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATTTGTCTGGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000382201.7
ENST00000446278.5
CDS-3UTR GCA 90 bp CCAGACAAATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACTTCATAGCCCTCCTGTaGCACTGTTGTCATTCGTGG +
Preference number: 4 (lower is better)
Translates to: PDKCSYNIYSSMPESNYDFIALL*HCCHSW
Trigger: CCACGAATGACAACAGTGGCACAGGAGGGCTATGAA...GTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATTTGTCTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329066.9
ENST00000422464.5
CDS-3UTR GCA 90 bp ACACTTGATACAAGACAGAAGGGCCTGGACAGGAGCTCTTTTCACAAAGGACCGAGCAATTTTGAAACATaGGATCATTATGAGGAAGCG +
Preference number: 4 (lower is better)
Translates to: TLDTRQKGLDRSSFHKGPSNFET*DHYEEA
Trigger: CGCTTCCTCATAATGATCGCATGTTTCAAAATTGCT...CGGTCCTTTGTGAAAAGAGCTCCTGTCCAGGCCCTTCTGTCTTGTATCAAGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422464.5
CDS-3UTR CCA 90 bp AAATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACATGGTAGGTTTCTCTGCATCGTaGCGTACATGGCGGTGTCCA +
Preference number: 4 (lower is better)
Translates to: KCSYNIYSSMPESNYDMVGFSAS*RTWRCP
Trigger: TGGACACCGCCATGTACGCCACGATGCAGAGAAACC...TACCATGTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
CDS-3UTR CCA 90 bp ACTAGATTTACCCGTGTTGGGAAAACAGTCGTCCTGCTGATTTCGGATTTGCCTAATCACTCCGCTTGTTaGCTCAGGAAGTTTGGAAAA +
Preference number: 4 (lower is better)
Translates to: TRFTRVGKTVVLLISDLPNHSAC*LRKFGK
Trigger: TTTTCCAAACTTCCTGAGCCAACAAGCGGAGTGATT...AGGCAAATCCGAAATCAGCAGGACGACTGTTTTCCCAACACGGGTAAATCTAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR CCA 90 bp CCAGACAAATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACGTGAACGCGATGTCGTaGTCGATGTATTGTCCCCAT +
Preference number: 4 (lower is better)
Translates to: PDKCSYNIYSSMPESNYDVNAMS*SMYCPH
Trigger: ATGGGGACAATACATCGACCACGACATCGCGTTCAC...GTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATTTGTCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR CCA 90 bp CTGAAGCAAAATGTTCATAGCCCTCCTGTGCCACTGTTGTCATTCGTGGGTGAGTTGTATGGGAAAACATaGGTTTTGGTTCTCACAAGT +
Preference number: 4 (lower is better)
Translates to: LKQNVHSPPVPLLSFVGELYGKT*VLVLTS
Trigger: ACTTGTGAGAACCAAAACCCATGTTTTCCCATACAA...CTCACCCACGAATGACAACAGTGGCACAGGAGGGCTATGAACATTTTGCTTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000329066.9
ENST00000422464.5
CDS-3UTR CCA 90 bp TATTCATCCATGCCTGAGAGTAACTACGACATGGTACTAGATTTACCCGTGTTGCCTCCGGGAGTTGTATaGGAAAACATGGGTTTTGGT +
Preference number: 4 (lower is better)
Translates to: YSSMPESNYDMVLDLPVLPPGVV*ENMGFG
Trigger: ACCAAAACCCATGTTTTCCCATACAACTCCCGGAGG...CAACACGGGTAAATCTAGTACCATGTCGTAGTTACTCTCAGGCATGGATGAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR CCA 90 bp GGCCAGACAAATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGCCTCCGGGAGTTGTATaGGAAAACATGGGTTTTGGT +
Preference number: 4 (lower is better)
Translates to: GQTNAAITFIHPCLRVTTPPGVV*ENMGFG
Trigger: ACCAAAACCCATGTTTTCCCATACAACTCCCGGAGG...CGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATTTGTCTGGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR CCA 90 bp AGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACATGGTACTAGATCCTGCACCTGCAGTTTaGCTGGTCTTGCAAGAAGGC +
Preference number: 4 (lower is better)
Translates to: SYNIYSSMPESNYDMVLDPAPAV*LVLQEG
Trigger: GCCTTCTTGCAAGACCAGCCAAACTGCAGGTGCAGG...ATCTAGTACCATGTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000422464.5
CDS-3UTR CCA 90 bp TATTCATCCATGCCTGAGAGTAACTACGACATGGTACTAGATTTACCCGTGTTGCCAAGGTGCTGGAATTaGACAGCACAAAGAGCCTTT +
Preference number: 4 (lower is better)
Translates to: YSSMPESNYDMVLDLPVLPRCWN*TAQRAF
Trigger: AAAGGCTCTTTGTGCTGTCCAATTCCAGCACCTTGG...CAACACGGGTAAATCTAGTACCATGTCGTAGTTACTCTCAGGCATGGATGAATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000422464.5
CDS-3UTR CCA 90 bp GGCCAGACAAATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGCCAGATCCAAGGTGCTaGAATTGGACAGCACAAAGA +
Preference number: 4 (lower is better)
Translates to: GQTNAAITFIHPCLRVTTPDPRC*NWTAQR
Trigger: TCTTTGTGCTGTCCAATTCCAGCACCTTGGATCTGG...CGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATTTGTCTGGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000422464.5
CDS-3UTR CCA 90 bp ACTGTTCTGCTCTCTGCTTCTCTCAGTTCAAAAGTCAGACTTACACAAGTGAGTCCAGATCCAAGGTGCTaGAATTGGACAGCACAAAGA +
Preference number: 4 (lower is better)
Translates to: TVLLSASLSSKVRLTQVSPDPRC*NWTAQR
Trigger: TCTTTGTGCTGTCCAATTCCAGCACCTTGGATCTGG...ACTCACTTGTGTAAGTCTGACTTTTGAACTGAGAGAAGCAGAGAGCAGAACAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422464.5
ENST00000625793.2
CDS-3UTR CCA 90 bp AATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACATGGTACGCATCCGTGAAGACGTaGCTGTTCTCCCACCAAAAC +
Preference number: 4 (lower is better)
Translates to: NAAITFIHPCLRVTTTWYASVKT*LFSHQN
Trigger: GTTTTGGTGGGAGAACAGCCACGTCTTCACGGATGC...GTACCATGTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000446278.5
CDS-3UTR CCA 90 bp CAGACAAATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACAGCATCCGTGAAGACGTaGCTGTTCTCCCACCAAAAC +
Preference number: 4 (lower is better)
Translates to: QTNAAITFIHPCLRVTTTASVKT*LFSHQN
Trigger: GTTTTGGTGGGAGAACAGCCACGTCTTCACGGATGC...TGTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATTTGTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000446278.5
CDS-3UTR CCA 90 bp AATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACATGGTACAAATCCCATCCTTCCTaGGTGCAAGTGAGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: NAAITFIHPCLRVTTTWYKSHPS*VQVSCS
Trigger: GGAGCAGCTCACTTGCACCCAGGAAGGATGGGATTT...GTACCATGTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000446278.5
CDS-3UTR CCA 90 bp CAGACAAATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACAAAATCCCATCCTTCCTaGGTGCAAGTGAGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: QTNAAITFIHPCLRVTTTKSHPS*VQVSCS
Trigger: GGAGCAGCTCACTTGCACCCAGGAAGGATGGGATTT...TGTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATTTGTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000446278.5
CDS-3UTR CCA 90 bp AAATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACATGGTATCCGCGCAGAGACACTaGAAGCCGCCTTTGGTGTTT +
Preference number: 4 (lower is better)
Translates to: KCSYNIYSSMPESNYDMVSAQRH*KPPLVF
Trigger: AAACACCAAAGGCGGCTTCCAGTGTCTCTGCGCGGA...TACCATGTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000382201.7
ENST00000446278.5
CDS-3UTR CCA 90 bp CCTGAGAGTAACTACGACATGGTACTAGATTTACCCGTGTTGGGAAAACAGTCGTCAGTGCTGCCTCGATaGTCTGTTTTATCCATGAAT +
Preference number: 4 (lower is better)
Translates to: PESNYDMVLDLPVLGKQSSVLPR*SVLSMN
Trigger: ATTCATGGATAAAACAGACCATCGAGGCAGCACTGA...CGACTGTTTTCCCAACACGGGTAAATCTAGTACCATGTCGTAGTTACTCTCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329066.9
ENST00000422464.5
CDS-3UTR CCA 90 bp AAAGCTTTGACTGGCTTCAGTTTCGCATTATTTGGTCTGTCCTGCTGGAAGGTTCAGTTTCGCATTATTTaGTCTGTCCTGCTGGAAGGT +
Preference number: 4 (lower is better)
Translates to: KALTGFSFALFGLSCWKVQFRII*SVLLEG
Trigger: ACCTTCCAGCAGGACAGACCAAATAATGCGAAACTG...AACCTTCCAGCAGGACAGACCAAATAATGCGAAACTGAAGCCAGTCAAAGCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382269.7
ENST00000539820.5
ENST00000617910.3
ENST00000629774.2
CDS-3UTR CCA 90 bp ACTGTTCTGCTCTCTGCTTCTCTCAGTTCAAAAGTCAGACTTACACAAGTGAGTAGCAGGCTCACATTCTaGCTCACTGTCATTAGCTTG +
Preference number: 4 (lower is better)
Translates to: TVLLSASLSSKVRLTQVSSRLTF*LTVISL
Trigger: CAAGCTAATGACAGTGAGCCAGAATGTGAGCCTGCT...ACTCACTTGTGTAAGTCTGACTTTTGAACTGAGAGAAGCAGAGAGCAGAACAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422464.5
ENST00000625793.2
CDS-3UTR CCA 90 bp TGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACATGGTACTATTCACAAAGGACCGCTaGCGAGATGAGCCATCCTTC +
Preference number: 4 (lower is better)
Translates to: CSYNIYSSMPESNYDMVLFTKDR*RDEPSF
Trigger: GAAGGATGGCTCATCTCGCCAGCGGTCCTTTGTGAA...TAGTACCATGTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422464.5
3UTR CAA 72 bp AAGTGGAAGCAAACGCCTGAAAGTGAGCCCTTAGTTTaGGAACCGGTTTGTACAAATGGAAGGCATCTTCAT +
Preference number: 4 (lower is better)
Translates to: KWKQTPESEPLV*EPVCTNGRHLH
Trigger: ATGAAGATGCCTTCCATTTGTACAAACCGGTTCCAAAACTAAGGGCTCACTTTCAGGCGTTTGCTTCCACTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422464.5
ENST00000625793.2
CDS-3UTR TCA 90 bp CAGACAAATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACATGTTGCAAGCTCCTGTaGTGGGCCTGTATTTGTTCG +
Preference number: 4 (lower is better)
Translates to: QTNAAITFIHPCLRVTTTCCKLL*WACICS
Trigger: CGAACAAATACAGGCCCATCACAGGAGCTTGCAACA...TGTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATTTGTCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR TCA 90 bp ACAAATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACATGGTGTTGCAAGCTCCTGTaGTGGGCCTGTATTTGTTCG +
Preference number: 4 (lower is better)
Translates to: TNAAITFIHPCLRVTTTWCCKLL*WACICS
Trigger: CGAACAAATACAGGCCCATCACAGGAGCTTGCAACA...CCATGTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR TCA 90 bp TCATCCATGCCTGAGAGTAACTACGACATGGTACTAGATTTACCCGTGTTGGGAACCTCATTTGAAACTTaGATGACATGTCTTGTCACC +
Preference number: 4 (lower is better)
Translates to: SSMPESNYDMVLDLPVLGTSFET*MTCLVT
Trigger: GGTGACAAGACATGTCATTCAAGTTTCAAATGAGGT...TCCCAACACGGGTAAATCTAGTACCATGTCGTAGTTACTCTCAGGCATGGATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR TCA 90 bp GGTACTAGATTTACCCGTGTTGGGAAAACAGTCGTCCTGCTGATTTCGGATTTGACCTCATTTGAAACTTaGATGACATGTCTTGTCACC +
Preference number: 4 (lower is better)
Translates to: GTRFTRVGKTVVLLISDLTSFET*MTCLVT
Trigger: GGTGACAAGACATGTCATTCAAGTTTCAAATGAGGT...CAAATCCGAAATCAGCAGGACGACTGTTTTCCCAACACGGGTAAATCTAGTACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR TCA 90 bp GAGAGTAACTACGACATGGTACTAGATTTACCCGTGTTGGGAAAACAGTCGTCCACCTCATTTGAAACTTaGATGACATGTCTTGTCACC +
Preference number: 4 (lower is better)
Translates to: ESNYDMVLDLPVLGKQSSTSFET*MTCLVT
Trigger: GGTGACAAGACATGTCATTCAAGTTTCAAATGAGGT...GGACGACTGTTTTCCCAACACGGGTAAATCTAGTACCATGTCGTAGTTACTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR TCA 90 bp AAAGAGTCGTACGGTGATTTTGGGAACATGAAGCTGTTCTGCAGTGTCCTGCCATGTGACAACCTCATTTaGAACTTGAATGACATGTCT +
Preference number: 4 (lower is better)
Translates to: KESYGDFGNMKLFCSVLPCDNLI*NLNDMS
Trigger: AGACATGTCATTCAAGTTTCAAATGAGGTTGTCACA...TGGCAGGACACTGCAGAACAGCTTCATGTTCCCAAAATCACCGTACGACTCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR TCA 90 bp GATTTGCCTGTGTTTGGAAAAGAGTCGTACGGTGATTTTGGGAACATGAAGCTGAGCGGTCATCATCTGTaGCAACCTCATTTGAAACTT +
Preference number: 4 (lower is better)
Translates to: DLPVFGKESYGDFGNMKLSGHHL*QPHLKL
Trigger: AAGTTTCAAATGAGGTTGTCACAGATGATGACCGCT...CAGCTTCATGTTCCCAAAATCACCGTACGACTCTTTTCCAAACACAGGCAAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR TCA 90 bp TGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACATGGTACTACCAGGTTCATGCCAGTaGTGCTGTCACAAGACTCAA +
Preference number: 4 (lower is better)
Translates to: CSYNIYSSMPESNYDMVLPGSCQ*CCHKTQ
Trigger: TTGAGTCTTGTGACAGCATCACTGGCATGAACCTGG...TAGTACCATGTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000446278.5
ENST00000469607.3
CDS-3UTR TCA 90 bp GACAAATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACATGCCAGGTTCATGCCAGTaGTGCTGTCACAAGACTCAA +
Preference number: 4 (lower is better)
Translates to: DKCSYNIYSSMPESNYDMPGSCQ*CCHKTQ
Trigger: TTGAGTCTTGTGACAGCATCACTGGCATGAACCTGG...CATGTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATTTGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000446278.5
CDS-3UTR TCA 90 bp TTGCCTGTGTTTGGAAAAGAGTCGTACGGTGATTTTGGGAACATGAAGCTGTTCAAAAGAGTCGTACGGTaGTTTTGGGAACATGAAGCT +
Preference number: 4 (lower is better)
Translates to: LPVFGKESYGDFGNMKLFKRVVR*FWEHEA
Trigger: AGCTTCATGTTCCCAAAATCACCGTACGACTCTTTT...GAACAGCTTCATGTTCCCAAAATCACCGTACGACTCTTTTCCAAACACAGGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000469607.3
CDS-3UTR TCA 90 bp ACAAATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACATGGGCTTCACATGTGAAATaGGGACGGCAGCTTTACAGG +
Preference number: 4 (lower is better)
Translates to: TNAAITFIHPCLRVTTTWASHVK*GRQLYR
Trigger: CCTGTAAAGCTGCCGTCCTCATTTCACATGTGAAGC...CCATGTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329066.9
ENST00000422464.5
CDS-3UTR TCA 90 bp GACAAATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACATGGTTGTCATTCGTGGGTaGGATCATTCAGTGCTGCCT +
Preference number: 4 (lower is better)
Translates to: DKCSYNIYSSMPESNYDMVVIRG*DHSVLP
Trigger: AGGCAGCACTGAATGATCTCACCCACGAATGACAAC...CATGTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATTTGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329066.9
ENST00000422464.5
CDS-3UTR GCA 90 bp AATACAATGTGTGAAGCCTTGAACGTAGGAGATTTTAGATCCAGATGCTGTGAATTCTTGAGGTTTCTCTaGATCGTGGCGTACATGGCG +
Preference number: 4 (lower is better)
Translates to: NTMCEALNVGDFRSRCCEFLRFL*IVAYMA
Trigger: CGCCATGTACGCCACGATGCAGAGAAACCTCAAGAA...TTCACAGCATCTGGATCTAAAATCTCCTACGTTCAAGGCTTCACACATTGTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382269.7
ENST00000539820.5
ENST00000617910.3
ENST00000629774.2
CDS-3UTR GCA 90 bp AATACAATGTGTGAAGCCTTGAACGTAGGAGATTTTAGATCCAGATGCTGTGAATTCCATTATCTCTGCTaGTCGGGCAATCACTCCGCT +
Preference number: 4 (lower is better)
Translates to: NTMCEALNVGDFRSRCCEFHYLC*SGNHSA
Trigger: AGCGGAGTGATTGCCCGAGCAGCAGAGATAATGGAA...TTCACAGCATCTGGATCTAAAATCTCCTACGTTCAAGGCTTCACACATTGTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382269.7
ENST00000539820.5
ENST00000617910.3
ENST00000629774.2
CDS-3UTR GCA 90 bp AAAGCTTTGACTGGCTTCAGTTTCGCATTATTTGGTCTGTCCTGCTGGAAGGTTACATCCAGACATGTTTaGAATGATGCTCAGCAGATC +
Preference number: 4 (lower is better)
Translates to: KALTGFSFALFGLSCWKVTSRHV*NDAQQI
Trigger: GATCTGCTGAGCATCATTGCAAACATGTCTGGATGT...AACCTTCCAGCAGGACAGACCAAATAATGCGAAACTGAAGCCAGTCAAAGCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382269.7
ENST00000539820.5
ENST00000617910.3
ENST00000629774.2
CDS-3UTR GCA 90 bp GCTTCAGTTTCGCATTATTTGGTCTGTCCTGCTGGAAGGTTCCTAGTTAAACAGACATCCAGACATGTTTaGAATGATGCTCAGCAGATC +
Preference number: 4 (lower is better)
Translates to: ASVSHYLVCPAGRFLVKQTSRHV*NDAQQI
Trigger: GATCTGCTGAGCATCATTGCAAACATGTCTGGATGT...CTGTTTAACTAGGAACCTTCCAGCAGGACAGACCAAATAATGCGAAACTGAAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382269.7
ENST00000539820.5
ENST00000617910.3
ENST00000629774.2
CDS-3UTR GCA 90 bp AAGCAAACGCCTGAAAGTGAGCCCTTAGTTTTGGAACCGGTTTGTACAAATGGAACATCCAGACATGTTTaGAATGATGCTCAGCAGATC +
Preference number: 4 (lower is better)
Translates to: KQTPESEPLVLEPVCTNGTSRHV*NDAQQI
Trigger: GATCTGCTGAGCATCATTGCAAACATGTCTGGATGT...TCCATTTGTACAAACCGGTTCCAAAACTAAGGGCTCACTTTCAGGCGTTTGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422464.5
ENST00000625793.2
CDS-3UTR GCA 90 bp ACAAATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACATGGACGCCAGATCCAAGGTaGTGGAATTGGACAGCACAA +
Preference number: 4 (lower is better)
Translates to: TNAAITFIHPCLRVTTTWTPDPR*WNWTAQ
Trigger: TTGTGCTGTCCAATTCCAGCACCTTGGATCTGGCGT...CCATGTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000422464.5
CDS-3UTR GCA 90 bp AAATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACATGGTACGCAGAGCCTTCATCTaGTTCCCAATGAGACAGGCA +
Preference number: 4 (lower is better)
Translates to: KCSYNIYSSMPESNYDMVRRAFI*FPMRQA
Trigger: TGCCTGTCTCATTGGGAAGCAGATGAAGGCTCTGCG...TACCATGTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000446278.5
CDS-3UTR GCA 90 bp TGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACATGGTACTAAGTCTTCGGGGAATTTaGCGACTTGGAAGGCATCCA +
Preference number: 4 (lower is better)
Translates to: CSYNIYSSMPESNYDMVLSLRGI*RLGRHP
Trigger: TGGATGCCTTCCAAGTCGGCAAATTCCCCGAAGACT...TAGTACCATGTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000446278.5
ENST00000469607.3
CDS-3UTR GCA 90 bp ACAAATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACATGGAGTCTTCGGGGAATTTaGCGACTTGGAAGGCATCCA +
Preference number: 4 (lower is better)
Translates to: TNAAITFIHPCLRVTTTWSLRGI*RLGRHP
Trigger: TGGATGCCTTCCAAGTCGGCAAATTCCCCGAAGACT...CCATGTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000446278.5
CDS-3UTR GCA 90 bp AGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACATGGTACTAGATCCAGACTCCTCACAGTaGACAAAGTCCCCATTCTCC +
Preference number: 4 (lower is better)
Translates to: SYNIYSSMPESNYDMVLDPDSSQ*TKSPFS
Trigger: GGAGAATGGGGACTTTGTGCACTGTGAGGAGTCTGG...ATCTAGTACCATGTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000446278.5
ENST00000469607.3
CDS-3UTR GCA 90 bp CCAGACAAATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACACTCGTTCACATCTTTaGAGAGGGGAGGCTGGAAAT +
Preference number: 4 (lower is better)
Translates to: PDKCSYNIYSSMPESNYDTRSHL*RGEAGN
Trigger: ATTTCCAGCCTCCCCTCTGCAAAGATGTGAACGAGT...GTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATTTGTCTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000382201.7
ENST00000446278.5
CDS-3UTR GCA 90 bp AAATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACATGGTATGCTGGCACTGCCCTTaGTGTGGCTGGAAAAGCTAT +
Preference number: 4 (lower is better)
Translates to: KCSYNIYSSMPESNYDMVCWHCP*CGWKSY
Trigger: ATAGCTTTTCCAGCCACAGCAAGGGCAGTGCCAGCA...TACCATGTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422464.5
CDS-3UTR GCA 90 bp ACAAATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACATGGCCTTCTTGCTTGTCATaGTGGAGGGAAGTTTCTGGC +
Preference number: 4 (lower is better)
Translates to: TNAAITFIHPCLRVTTTWPSCLS*WREVSG
Trigger: GCCAGAAACTTCCCTCCAGCATGACAAGCAAGAAGG...CCATGTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422464.5
CDS-3UTR CCA 90 bp TTTGGAAAAGAGTCGTACGGTGATTTTGGGAACATGAAGCTGTTCTGCAGTGTCAGACAGAAGCTGAGCTaGAGAAAGGATTCCTCTTTT +
Preference number: 4 (lower is better)
Translates to: FGKESYGDFGNMKLFCSVRQKLS*RKDSSF
Trigger: AAAAGAGGAATCCTTTCTCCAGCTCAGCTTCTGTCT...GACACTGCAGAACAGCTTCATGTTCCCAAAATCACCGTACGACTCTTTTCCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
CDS-3UTR CCA 90 bp AAAGCTTTGACTGGCTTCAGTTTCGCATTATTTGGTCTGTCCTGCTGGAAGGTTAATCACTCCGCTTGTTaGCTCAGGAAGTTTGGAAAA +
Preference number: 4 (lower is better)
Translates to: KALTGFSFALFGLSCWKVNHSAC*LRKFGK
Trigger: TTTTCCAAACTTCCTGAGCCAACAAGCGGAGTGATT...AACCTTCCAGCAGGACAGACCAAATAATGCGAAACTGAAGCCAGTCAAAGCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382269.7
ENST00000539820.5
ENST00000617910.3
ENST00000629774.2
CDS-3UTR CCA 90 bp GACAAATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACATGGTGAACGCGATGTCGTaGTCGATGTATTGTCCCCAT +
Preference number: 4 (lower is better)
Translates to: DKCSYNIYSSMPESNYDMVNAMS*SMYCPH
Trigger: ATGGGGACAATACATCGACCACGACATCGCGTTCAC...CATGTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATTTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR CCA 90 bp GATTTGCCTGTGTTTGGAAAAGAGTCGTACGGTGATTTTGGGAACATGAAGCTGGGAAAACATGGGTTTTaGTTCTCACAAGTCATCTGG +
Preference number: 4 (lower is better)
Translates to: DLPVFGKESYGDFGNMKLGKHGF*FSQVIW
Trigger: CCAGATGACTTGTGAGAACCAAAACCCATGTTTTCC...CAGCTTCATGTTCCCAAAATCACCGTACGACTCTTTTCCAAACACAGGCAAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR CCA 90 bp AGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACATGGTACTAGATAAATCCCATCCTTCCTaGGTGCAAGTGAGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: SYNIYSSMPESNYDMVLDKSHPS*VQVSCS
Trigger: GGAGCAGCTCACTTGCACCCAGGAAGGATGGGATTT...ATCTAGTACCATGTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000446278.5
ENST00000469607.3
CDS-3UTR CCA 90 bp TGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACATGGTACTACACAGAGGATCCACGTaGCAAAGGTTCCTACTCACA +
Preference number: 4 (lower is better)
Translates to: CSYNIYSSMPESNYDMVLHRGST*QRFLLT
Trigger: TGTGAGTAGGAACCTTTGCCACGTGGATCCTCTGTG...TAGTACCATGTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422464.5
CDS-3UTR TCA 90 bp AATACAATGTGTGAAGCCTTGAACGTAGGAGATTTTAGATCCAGATGCTGTGAAAGCCAACTGCACTGCTaGGTAATTTTCACGGCTGTA +
Preference number: 4 (lower is better)
Translates to: NTMCEALNVGDFRSRCCESQLHC*VIFTAV
Trigger: TACAGCCGTGAAAATTACTCAGCAGTGCAGTTGGCT...TTCACAGCATCTGGATCTAAAATCTCCTACGTTCAAGGCTTCACACATTGTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382269.7
ENST00000539820.5
ENST00000617910.3
ENST00000629774.2
CDS-3UTR TCA 90 bp ATGTGTGAAGCCTTGAACGTAGGAGATTTTAGATCCAGATGCTGTGAATTCTTAGGATTCCTCTTTTCTTaGGGTTTCTCTGCATCGTGG +
Preference number: 4 (lower is better)
Translates to: MCEALNVGDFRSRCCEFLGFLFS*GFSASW
Trigger: CCACGATGCAGAGAAACCTCAAGAAAAGAGGAATCC...TAAGAATTCACAGCATCTGGATCTAAAATCTCCTACGTTCAAGGCTTCACACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382269.7
ENST00000539820.5
ENST00000617910.3
ENST00000629774.2
CDS-3UTR TCA 90 bp GAGAGTAACTACGACATGGTACTAGATTTACCCGTGTTGGGAAAACAGTCGTCCTTTCATCGCTTGTATTaGTGTTTCCATTATCTCTGC +
Preference number: 4 (lower is better)
Translates to: ESNYDMVLDLPVLGKQSSFHRLY*CFHYLC
Trigger: GCAGAGATAATGGAAACATCAATACAAGCGATGAAA...GGACGACTGTTTTCCCAACACGGGTAAATCTAGTACCATGTCGTAGTTACTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR TCA 90 bp GTTGGTGAATCTCTGGAGGATGAGACAAGTCACTTTGCCTTGTTGGTCCTTAAGTTTCATCGCTTGTATTaGTGTTTCCATTATCTCTGC +
Preference number: 4 (lower is better)
Translates to: VGESLEDETSHFALLVLKFHRLY*CFHYLC
Trigger: GCAGAGATAATGGAAACATCAATACAAGCGATGAAA...CTTAAGGACCAACAAGGCAAAGTGACTTGTCTCATCCTCCAGAGATTCACCAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329066.9
ENST00000422464.5
CDS-3UTR TCA 90 bp TGGAGAAAAGCTTTGACTGGCTTCAGTTTCGCATTATTTGGTCTGTCCTGCTGGTTTCATCGCTTGTATTaGTGTTTCCATTATCTCTGC +
Preference number: 4 (lower is better)
Translates to: WRKALTGFSFALFGLSCWFHRLY*CFHYLC
Trigger: GCAGAGATAATGGAAACATCAATACAAGCGATGAAA...CCAGCAGGACAGACCAAATAATGCGAAACTGAAGCCAGTCAAAGCTTTTCTCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382269.7
ENST00000539820.5
ENST00000617910.3
ENST00000629774.2
CDS-3UTR TCA 90 bp TTTGGAAAAGAGTCGTACGGTGATTTTGGGAACATGAAGCTGTTCTGCAGTGTCGGATGCTGTGATTGTTaGGTTTTCAGGTTGACTTTT +
Preference number: 4 (lower is better)
Translates to: FGKESYGDFGNMKLFCSVGCCDC*VFRLTF
Trigger: AAAAGTCAACCTGAAAACTCAACAATCACAGCATCC...GACACTGCAGAACAGCTTCATGTTCCCAAAATCACCGTACGACTCTTTTCCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR TCA 90 bp TTGCCTGTGTTTGGAAAAGAGTCGTACGGTGATTTTGGGAACATGAAGCTGTTCGGATGCTGTGATTGTTaGGTTTTCAGGTTGACTTTT +
Preference number: 4 (lower is better)
Translates to: LPVFGKESYGDFGNMKLFGCCDC*VFRLTF
Trigger: AAAAGTCAACCTGAAAACTCAACAATCACAGCATCC...GAACAGCTTCATGTTCCCAAAATCACCGTACGACTCTTTTCCAAACACAGGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR TCA 90 bp AAGCAAACGCCTGAAAGTGAGCCCTTAGTTTTGGAACCGGTTTGTACAAATGGAGGATGCTGTGATTGTTaGGTTTTCAGGTTGACTTTT +
Preference number: 4 (lower is better)
Translates to: KQTPESEPLVLEPVCTNGGCCDC*VFRLTF
Trigger: AAAAGTCAACCTGAAAACTCAACAATCACAGCATCC...TCCATTTGTACAAACCGGTTCCAAAACTAAGGGCTCACTTTCAGGCGTTTGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422464.5
ENST00000625793.2
CDS-3UTR TCA 90 bp AGGCCAGACAAATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACCAGACATGTTTGCAATaGTGCTCAGCAGATCTTCTG +
Preference number: 4 (lower is better)
Translates to: RPDKCSYNIYSSMPESNYQTCLQ*CSADLL
Trigger: CAGAAGATCTGCTGAGCATCATTGCAAACATGTCTG...GTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATTTGTCTGGCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR TCA 90 bp TATTCATCCATGCCTGAGAGTAACTACGACATGGTACTAGATTTACCCGTGTTGCATTTGAAACTTGAATaGCATGTCTTGTCACCTCCC +
Preference number: 4 (lower is better)
Translates to: YSSMPESNYDMVLDLPVLHLKLE*HVLSPP
Trigger: GGGAGGTGACAAGACATGTCATTCAAGTTTCAAATG...CAACACGGGTAAATCTAGTACCATGTCGTAGTTACTCTCAGGCATGGATGAATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR TCA 90 bp GGCCAGACAAATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGCATTTGAAACTTGAATaGCATGTCTTGTCACCTCCC +
Preference number: 4 (lower is better)
Translates to: GQTNAAITFIHPCLRVTTHLKLE*HVLSPP
Trigger: GGGAGGTGACAAGACATGTCATTCAAGTTTCAAATG...CGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATTTGTCTGGCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR TCA 90 bp ACTGTTCTGCTCTCTGCTTCTCTCAGTTCAAAAGTCAGACTTACACAAGTGAGTCATTTGAAACTTGAATaGCATGTCTTGTCACCTCCC +
Preference number: 4 (lower is better)
Translates to: TVLLSASLSSKVRLTQVSHLKLE*HVLSPP
Trigger: GGGAGGTGACAAGACATGTCATTCAAGTTTCAAATG...ACTCACTTGTGTAAGTCTGACTTTTGAACTGAGAGAAGCAGAGAGCAGAACAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422464.5
ENST00000625793.2
CDS-3UTR TCA 90 bp TCATCCATGCCTGAGAGTAACTACGACATGGTACTAGATTTACCCGTGTTGGGATGTGACAACCTCATTTaGAACTTGAATGACATGTCT +
Preference number: 4 (lower is better)
Translates to: SSMPESNYDMVLDLPVLGCDNLI*NLNDMS
Trigger: AGACATGTCATTCAAGTTTCAAATGAGGTTGTCACA...TCCCAACACGGGTAAATCTAGTACCATGTCGTAGTTACTCTCAGGCATGGATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR TCA 90 bp GGTACTAGATTTACCCGTGTTGGGAAAACAGTCGTCCTGCTGATTTCGGATTTGTGTGACAACCTCATTTaGAACTTGAATGACATGTCT +
Preference number: 4 (lower is better)
Translates to: GTRFTRVGKTVVLLISDLCDNLI*NLNDMS
Trigger: AGACATGTCATTCAAGTTTCAAATGAGGTTGTCACA...CAAATCCGAAATCAGCAGGACGACTGTTTTCCCAACACGGGTAAATCTAGTACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR TCA 90 bp GAGAGTAACTACGACATGGTACTAGATTTACCCGTGTTGGGAAAACAGTCGTCCTGTGACAACCTCATTTaGAACTTGAATGACATGTCT +
Preference number: 4 (lower is better)
Translates to: ESNYDMVLDLPVLGKQSSCDNLI*NLNDMS
Trigger: AGACATGTCATTCAAGTTTCAAATGAGGTTGTCACA...GGACGACTGTTTTCCCAACACGGGTAAATCTAGTACCATGTCGTAGTTACTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR TCA 90 bp TATTCATCCATGCCTGAGAGTAACTACGACATGGTACTAGATTTACCCGTGTTGAGCGGTCATCATCTGTaGCAACCTCATTTGAAACTT +
Preference number: 4 (lower is better)
Translates to: YSSMPESNYDMVLDLPVLSGHHL*QPHLKL
Trigger: AAGTTTCAAATGAGGTTGTCACAGATGATGACCGCT...CAACACGGGTAAATCTAGTACCATGTCGTAGTTACTCTCAGGCATGGATGAATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR TCA 90 bp GACAAATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACATGAAACAGTCGTCCTGCTaGTTTCGGATTTGCCTGTGT +
Preference number: 4 (lower is better)
Translates to: DKCSYNIYSSMPESNYDMKQSSC*FRICLC
Trigger: ACACAGGCAAATCCGAAATCAGCAGGACGACTGTTT...CATGTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATTTGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000446278.5
CDS-3UTR TCA 90 bp ACAATGTGTGAAGCCTTGAACGTAGGAGATTTTAGATCCAGATGCTGTGAATTCGTGGAATACAATGTGTaGAGCCTTGAACGTAGGAGA +
Preference number: 4 (lower is better)
Translates to: TMCEALNVGDFRSRCCEFVEYNV*SLERRR
Trigger: TCTCCTACGTTCAAGGCTTCACACATTGTATTCCAC...GAATTCACAGCATCTGGATCTAAAATCTCCTACGTTCAAGGCTTCACACATTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382269.7
ENST00000539820.5
ENST00000617910.3
ENST00000629774.2
CDS-3UTR GCA 90 bp AATACAATGTGTGAAGCCTTGAACGTAGGAGATTTTAGATCCAGATGCTGTGAATGTTTCCATTATCTCTaGTGCTCGGGCAATCACTCC +
Preference number: 4 (lower is better)
Translates to: NTMCEALNVGDFRSRCCECFHYL*CSGNHS
Trigger: GGAGTGATTGCCCGAGCAGCAGAGATAATGGAAACA...TTCACAGCATCTGGATCTAAAATCTCCTACGTTCAAGGCTTCACACATTGTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382269.7
ENST00000539820.5
ENST00000617910.3
ENST00000629774.2
CDS-3UTR GCA 90 bp GACAAATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACATGTGTTTCCATTATCTCTaGTGCTCGGGCAATCACTCC +
Preference number: 4 (lower is better)
Translates to: DKCSYNIYSSMPESNYDMCFHYL*CSGNHS
Trigger: GGAGTGATTGCCCGAGCAGCAGAGATAATGGAAACA...CATGTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATTTGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR GCA 90 bp TATTCATCCATGCCTGAGAGTAACTACGACATGGTACTAGATTTACCCGTGTTGACATCCAGACATGTTTaGAATGATGCTCAGCAGATC +
Preference number: 4 (lower is better)
Translates to: YSSMPESNYDMVLDLPVLTSRHV*NDAQQI
Trigger: GATCTGCTGAGCATCATTGCAAACATGTCTGGATGT...CAACACGGGTAAATCTAGTACCATGTCGTAGTTACTCTCAGGCATGGATGAATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR GCA 90 bp CCAGACAAATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACTCGATGTTGTCAGGATaGTTGTACAAGTCCAGGATC +
Preference number: 4 (lower is better)
Translates to: PDKCSYNIYSSMPESNYDSMLSG*LYKSRI
Trigger: GATCCTGGACTTGTACAAGCATCCTGACAACATCGA...GTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATTTGTCTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000446278.5
CDS-3UTR GCA 90 bp AGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACATGGTACTAGATAGTCTTCGGGGAATTTaGCGACTTGGAAGGCATCCA +
Preference number: 4 (lower is better)
Translates to: SYNIYSSMPESNYDMVLDSLRGI*RLGRHP
Trigger: TGGATGCCTTCCAAGTCGGCAAATTCCCCGAAGACT...ATCTAGTACCATGTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000446278.5
ENST00000469607.3
CDS-3UTR GCA 90 bp CAGACAAATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACAAACATGAAGCTGTTCTaGAGTGTCCTGCCACTTTGC +
Preference number: 4 (lower is better)
Translates to: QTNAAITFIHPCLRVTTTNMKLF*SVLPLC
Trigger: GCAAAGTGGCAGGACACTGCAGAACAGCTTCATGTT...TGTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATTTGTCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000446278.5
CDS-3UTR GCA 90 bp ACAAATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACATGGAACATGAAGCTGTTCTaGAGTGTCCTGCCACTTTGC +
Preference number: 4 (lower is better)
Translates to: TNAAITFIHPCLRVTTTWNMKLF*SVLPLC
Trigger: GCAAAGTGGCAGGACACTGCAGAACAGCTTCATGTT...CCATGTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000446278.5
CDS-3UTR GCA 90 bp GACAAATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACATGAACATGAAGCTGTTCTaGAGTGTCCTGCCACTTTGC +
Preference number: 4 (lower is better)
Translates to: DKCSYNIYSSMPESNYDMNMKLF*SVLPLC
Trigger: GCAAAGTGGCAGGACACTGCAGAACAGCTTCATGTT...CATGTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATTTGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000446278.5
CDS-3UTR GCA 90 bp TGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACATGGTACTAGGTGAGATCATTCAGTaGTGCCTCGATGGTCTGTTT +
Preference number: 4 (lower is better)
Translates to: CSYNIYSSMPESNYDMVLGEIIQ*CLDGLF
Trigger: AAACAGACCATCGAGGCAGCACTGAATGATCTCACC...TAGTACCATGTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329066.9
ENST00000422464.5
CDS-3UTR GCA 90 bp GACAAATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACATGGGTGAGATCATTCAGTaGTGCCTCGATGGTCTGTTT +
Preference number: 4 (lower is better)
Translates to: DKCSYNIYSSMPESNYDMGEIIQ*CLDGLF
Trigger: AAACAGACCATCGAGGCAGCACTGAATGATCTCACC...CATGTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATTTGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329066.9
ENST00000422464.5
CDS-3UTR GCA 90 bp AGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACATGGTACTAGATTTCATAGCCCTCCTGTaGCACTGTTGTCATTCGTGG +
Preference number: 4 (lower is better)
Translates to: SYNIYSSMPESNYDMVLDFIALL*HCCHSW
Trigger: CCACGAATGACAACAGTGGCACAGGAGGGCTATGAA...ATCTAGTACCATGTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329066.9
ENST00000422464.5
CDS-3UTR GCA 90 bp GAAAGTGAGCCCTTAGTTTTGGAACCGGTTTGTACAAATGGAAGGCATCTTCATCACTGTTCTGCTCTCTaGTTCTCTCAGTTCAAAAGT +
Preference number: 4 (lower is better)
Translates to: ESEPLVLEPVCTNGRHLHHCSAL*FSQFKS
Trigger: ACTTTTGAACTGAGAGAAGCAGAGAGCAGAACAGTG...ATGAAGATGCCTTCCATTTGTACAAACCGGTTCCAAAACTAAGGGCTCACTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422464.5
ENST00000625793.2
CDS-3UTR CCA 90 bp TATTCATCCATGCCTGAGAGTAACTACGACATGGTACTAGATTTACCCGTGTTGAGACAGAAGCTGAGCTaGAGAAAGGATTCCTCTTTT +
Preference number: 4 (lower is better)
Translates to: YSSMPESNYDMVLDLPVLRQKLS*RKDSSF
Trigger: AAAAGAGGAATCCTTTCTCCAGCTCAGCTTCTGTCT...CAACACGGGTAAATCTAGTACCATGTCGTAGTTACTCTCAGGCATGGATGAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
CDS-3UTR CCA 90 bp GAAAGTGAGCCCTTAGTTTTGGAACCGGTTTGTACAAATGGAAGGCATCTTCATAATCACTCCGCTTGTTaGCTCAGGAAGTTTGGAAAA +
Preference number: 4 (lower is better)
Translates to: ESEPLVLEPVCTNGRHLHNHSAC*LRKFGK
Trigger: TTTTCCAAACTTCCTGAGCCAACAAGCGGAGTGATT...ATGAAGATGCCTTCCATTTGTACAAACCGGTTCCAAAACTAAGGGCTCACTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422464.5
ENST00000625793.2
CDS-3UTR CCA 90 bp GAAAGTGAGCCCTTAGTTTTGGAACCGGTTTGTACAAATGGAAGGCATCTTCATGGAAAACATGGGTTTTaGTTCTCACAAGTCATCTGG +
Preference number: 4 (lower is better)
Translates to: ESEPLVLEPVCTNGRHLHGKHGF*FSQVIW
Trigger: CCAGATGACTTGTGAGAACCAAAACCCATGTTTTCC...ATGAAGATGCCTTCCATTTGTACAAACCGGTTCCAAAACTAAGGGCTCACTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000422464.5
ENST00000625793.2
CDS-3UTR CCA 90 bp GAGAGTAACTACGACATGGTACTAGATTTACCCGTGTTGGGAAAACAGTCGTCCTTGTATGGGAAAACATaGGTTTTGGTTCTCACAAGT +
Preference number: 4 (lower is better)
Translates to: ESNYDMVLDLPVLGKQSSLYGKT*VLVLTS
Trigger: ACTTGTGAGAACCAAAACCCATGTTTTCCCATACAA...GGACGACTGTTTTCCCAACACGGGTAAATCTAGTACCATGTCGTAGTTACTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR CCA 90 bp AAATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACATGGTAAGAGATGCCAGAAGGTaGAGACAGGAGGATTGCAAG +
Preference number: 4 (lower is better)
Translates to: KCSYNIYSSMPESNYDMVRDARR*RQEDCK
Trigger: CTTGCAATCCTCCTGTCTCCACCTTCTGGCATCTCT...TACCATGTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329066.9
ENST00000422464.5
CDS-3UTR CCA 90 bp AAATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACATGGTACAGAACAGGATGGCCTaGCACCTAGGGAAAACAACA +
Preference number: 4 (lower is better)
Translates to: KCSYNIYSSMPESNYDMVQNRMA*HLGKTT
Trigger: TGTTGTTTTCCCTAGGTGCCAGGCCATCCTGTTCTG...TACCATGTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329066.9
ENST00000422464.5
CDS-3UTR CCA 90 bp TGGAGAAAAGCTTTGACTGGCTTCAGTTTCGCATTATTTGGTCTGTCCTGCTGGGAGAAAAGCTTTGACTaGCTTCAGTTTCGCATTATT +
Preference number: 4 (lower is better)
Translates to: WRKALTGFSFALFGLSCWEKSFD*LQFRII
Trigger: AATAATGCGAAACTGAAGCCAGTCAAAGCTTTTCTC...CCAGCAGGACAGACCAAATAATGCGAAACTGAAGCCAGTCAAAGCTTTTCTCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382269.7
ENST00000539820.5
ENST00000617910.3
ENST00000629774.2
CDS-3UTR TCA 90 bp ACAATGTGTGAAGCCTTGAACGTAGGAGATTTTAGATCCAGATGCTGTGAATTCATCCGTTGGATGCTGTaGTTGTTGAGTTTTCAGGTT +
Preference number: 4 (lower is better)
Translates to: TMCEALNVGDFRSRCCEFIRWML*LLSFQV
Trigger: AACCTGAAAACTCAACAATCACAGCATCCAACGGAT...GAATTCACAGCATCTGGATCTAAAATCTCCTACGTTCAAGGCTTCACACATTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382269.7
ENST00000539820.5
ENST00000617910.3
ENST00000629774.2
CDS-3UTR TCA 90 bp GACAAATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACATGCAGACATGTTTGCAATaGTGCTCAGCAGATCTTCTG +
Preference number: 4 (lower is better)
Translates to: DKCSYNIYSSMPESNYDMQTCLQ*CSADLL
Trigger: CAGAAGATCTGCTGAGCATCATTGCAAACATGTCTG...CATGTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATTTGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR TCA 90 bp AAAGCCCCAGAAGGAACAAATCAGGCAATGTTTACAAGAAAAGGCCAGACAAATCATTTGAAACTTGAATaGCATGTCTTGTCACCTCCC +
Preference number: 4 (lower is better)
Translates to: KAPEGTNQAMFTRKGQTNHLKLE*HVLSPP
Trigger: GGGAGGTGACAAGACATGTCATTCAAGTTTCAAATG...ATTTGTCTGGCCTTTTCTTGTAAACATTGCCTGATTTGTTCCTTCTGGGGCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR TCA 90 bp GAAAGTGAGCCCTTAGTTTTGGAACCGGTTTGTACAAATGGAAGGCATCTTCATACCTCATTTGAAACTTaGATGACATGTCTTGTCACC +
Preference number: 4 (lower is better)
Translates to: ESEPLVLEPVCTNGRHLHTSFET*MTCLVT
Trigger: GGTGACAAGACATGTCATTCAAGTTTCAAATGAGGT...ATGAAGATGCCTTCCATTTGTACAAACCGGTTCCAAAACTAAGGGCTCACTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422464.5
ENST00000625793.2
CDS-3UTR TCA 90 bp AAAGCCCCAGAAGGAACAAATCAGGCAATGTTTACAAGAAAAGGCCAGACAAATAGCGGTCATCATCTGTaGCAACCTCATTTGAAACTT +
Preference number: 4 (lower is better)
Translates to: KAPEGTNQAMFTRKGQTNSGHHL*QPHLKL
Trigger: AAGTTTCAAATGAGGTTGTCACAGATGATGACCGCT...ATTTGTCTGGCCTTTTCTTGTAAACATTGCCTGATTTGTTCCTTCTGGGGCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR TCA 90 bp GCTTCAGTTTCGCATTATTTGGTCTGTCCTGCTGGAAGGTTCCTAGTTAAACAGAGTGATCATGATTTATaGATCAGGAAGCATCAAACC +
Preference number: 4 (lower is better)
Translates to: ASVSHYLVCPAGRFLVKQSDHDL*IRKHQT
Trigger: GGTTTGATGCTTCCTGATTCATAAATCATGATCACT...CTGTTTAACTAGGAACCTTCCAGCAGGACAGACCAAATAATGCGAAACTGAAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382269.7
ENST00000539820.5
ENST00000617910.3
ENST00000629774.2
CDS-3UTR GCA 90 bp AGGCCAGACAAATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACACATCCAGACATGTTTaGAATGATGCTCAGCAGATC +
Preference number: 4 (lower is better)
Translates to: RPDKCSYNIYSSMPESNYTSRHV*NDAQQI
Trigger: GATCTGCTGAGCATCATTGCAAACATGTCTGGATGT...GTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATTTGTCTGGCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR GCA 90 bp AATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACATGGTACGATGTATTGTCCCCATaGCATCAGGAGGTCAGAATA +
Preference number: 4 (lower is better)
Translates to: NAAITFIHPCLRVTTTWYDVLSP*HQEVRI
Trigger: TATTCTGACCTCCTGATGGCATGGGGACAATACATC...GTACCATGTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR GCA 90 bp TGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACATGGTACTAGATGTATTGTCCCCATaGCATCAGGAGGTCAGAATA +
Preference number: 4 (lower is better)
Translates to: CSYNIYSSMPESNYDMVLDVLSP*HQEVRI
Trigger: TATTCTGACCTCCTGATGGCATGGGGACAATACATC...TAGTACCATGTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR GCA 90 bp ACAAATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACATGGTCGATGTTGTCAGGATaGTTGTACAAGTCCAGGATC +
Preference number: 4 (lower is better)
Translates to: TNAAITFIHPCLRVTTTWSMLSG*LYKSRI
Trigger: GATCCTGGACTTGTACAAGCATCCTGACAACATCGA...CCATGTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATTTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000446278.5
CDS-3UTR GCA 90 bp AATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACATGGTACTCGATGTTGTCAGGATaGTTGTACAAGTCCAGGATC +
Preference number: 4 (lower is better)
Translates to: NAAITFIHPCLRVTTTWYSMLSG*LYKSRI
Trigger: GATCCTGGACTTGTACAAGCATCCTGACAACATCGA...GTACCATGTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000446278.5
CDS-3UTR CCA 90 bp AAAGCCCCAGAAGGAACAAATCAGGCAATGTTTACAAGAAAAGGCCAGACAAATAGACAGAAGCTGAGCTaGAGAAAGGATTCCTCTTTT +
Preference number: 4 (lower is better)
Translates to: KAPEGTNQAMFTRKGQTNRQKLS*RKDSSF
Trigger: AAAAGAGGAATCCTTTCTCCAGCTCAGCTTCTGTCT...ATTTGTCTGGCCTTTTCTTGTAAACATTGCCTGATTTGTTCCTTCTGGGGCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
CDS-3UTR CCA 90 bp AGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACATGGTACTAGATCCAAGGTGCTGGAATTaGACAGCACAAAGAGCCTTT +
Preference number: 4 (lower is better)
Translates to: SYNIYSSMPESNYDMVLDPRCWN*TAQRAF
Trigger: AAAGGCTCTTTGTGCTGTCCAATTCCAGCACCTTGG...ATCTAGTACCATGTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000422464.5
CDS-3UTR TCA 90 bp ACAAATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACATGGATCCGTTGGATGCTGTaGTTGTTGAGTTTTCAGGTT +
Preference number: 4 (lower is better)
Translates to: TNAAITFIHPCLRVTTTWIRWML*LLSFQV
Trigger: AACCTGAAAACTCAACAATCACAGCATCCAACGGAT...CCATGTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR TCA 90 bp AAATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACATGGTACAGACATGTTTGCAATaGTGCTCAGCAGATCTTCTG +
Preference number: 4 (lower is better)
Translates to: KCSYNIYSSMPESNYDMVQTCLQ*CSADLL
Trigger: CAGAAGATCTGCTGAGCATCATTGCAAACATGTCTG...TACCATGTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR TCA 90 bp TGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACATGGTACTACATTTGAAACTTGAATaGCATGTCTTGTCACCTCCC +
Preference number: 4 (lower is better)
Translates to: CSYNIYSSMPESNYDMVLHLKLE*HVLSPP
Trigger: GGGAGGTGACAAGACATGTCATTCAAGTTTCAAATG...TAGTACCATGTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR TCA 90 bp GACAAATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACATGCATTTGAAACTTGAATaGCATGTCTTGTCACCTCCC +
Preference number: 4 (lower is better)
Translates to: DKCSYNIYSSMPESNYDMHLKLE*HVLSPP
Trigger: GGGAGGTGACAAGACATGTCATTCAAGTTTCAAATG...CATGTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATTTGTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR TCA 90 bp AATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACATGGTACAAAAGAGTCGTACGGTaGTTTTGGGAACATGAAGCT +
Preference number: 4 (lower is better)
Translates to: NAAITFIHPCLRVTTTWYKRVVR*FWEHEA
Trigger: AGCTTCATGTTCCCAAAATCACCGTACGACTCTTTT...GTACCATGTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000446278.5
CDS-3UTR TCA 90 bp ACAAATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACATGGAAAAGAGTCGTACGGTaGTTTTGGGAACATGAAGCT +
Preference number: 4 (lower is better)
Translates to: TNAAITFIHPCLRVTTTWKRVVR*FWEHEA
Trigger: AGCTTCATGTTCCCAAAATCACCGTACGACTCTTTT...CCATGTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000446278.5
CDS-3UTR TCA 90 bp TGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACATGGTACTAAAAAGAGTCGTACGGTaGTTTTGGGAACATGAAGCT +
Preference number: 4 (lower is better)
Translates to: CSYNIYSSMPESNYDMVLKRVVR*FWEHEA
Trigger: AGCTTCATGTTCCCAAAATCACCGTACGACTCTTTT...TAGTACCATGTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000446278.5
ENST00000469607.3
CDS-3UTR GCA 90 bp GACAAATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACATGACATCCAGACATGTTTaGAATGATGCTCAGCAGATC +
Preference number: 4 (lower is better)
Translates to: DKCSYNIYSSMPESNYDMTSRHV*NDAQQI
Trigger: GATCTGCTGAGCATCATTGCAAACATGTCTGGATGT...CATGTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATTTGTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR GCA 90 bp AAATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACATGGTAGATGTATTGTCCCCATaGCATCAGGAGGTCAGAATA +
Preference number: 4 (lower is better)
Translates to: KCSYNIYSSMPESNYDMVDVLSP*HQEVRI
Trigger: TATTCTGACCTCCTGATGGCATGGGGACAATACATC...TACCATGTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR GCA 90 bp AAATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACATGGTATCGATGTTGTCAGGATaGTTGTACAAGTCCAGGATC +
Preference number: 4 (lower is better)
Translates to: KCSYNIYSSMPESNYDMVSMLSG*LYKSRI
Trigger: GATCCTGGACTTGTACAAGCATCCTGACAACATCGA...TACCATGTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000446278.5
CDS-3UTR CCA 90 bp ACAAATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACATGGAATCACTCCGCTTGTTaGCTCAGGAAGTTTGGAAAA +
Preference number: 4 (lower is better)
Translates to: TNAAITFIHPCLRVTTTWNHSAC*LRKFGK
Trigger: TTTTCCAAACTTCCTGAGCCAACAAGCGGAGTGATT...CCATGTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR CCA 90 bp AATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACATGGTACGGAAAACATGGGTTTTaGTTCTCACAAGTCATCTGG +
Preference number: 4 (lower is better)
Translates to: NAAITFIHPCLRVTTTWYGKHGF*FSQVIW
Trigger: CCAGATGACTTGTGAGAACCAAAACCCATGTTTTCC...GTACCATGTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR CCA 90 bp CAGACAAATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACAGGAAAACATGGGTTTTaGTTCTCACAAGTCATCTGG +
Preference number: 4 (lower is better)
Translates to: QTNAAITFIHPCLRVTTTGKHGF*FSQVIW
Trigger: CCAGATGACTTGTGAGAACCAAAACCCATGTTTTCC...TGTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATTTGTCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR CCA 90 bp TGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACATGGTACTATATTATTTTAGTGGGTaGCTGTGGTCCCAGCACTTT +
Preference number: 4 (lower is better)
Translates to: CSYNIYSSMPESNYDMVLYYFSG*LWSQHF
Trigger: AAAGTGCTGGGACCACAGCCACCCACTAAAATAATA...TAGTACCATGTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422464.5
CDS-3UTR TCA 90 bp CCAGACAAATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACTTTCATCGCTTGTATTaGTGTTTCCATTATCTCTGC +
Preference number: 4 (lower is better)
Translates to: PDKCSYNIYSSMPESNYDFHRLY*CFHYLC
Trigger: GCAGAGATAATGGAAACATCAATACAAGCGATGAAA...GTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATTTGTCTGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR TCA 90 bp AGGCCAGACAAATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACTTTCATCGCTTGTATTaGTGTTTCCATTATCTCTGC +
Preference number: 4 (lower is better)
Translates to: RPDKCSYNIYSSMPESNYFHRLY*CFHYLC
Trigger: GCAGAGATAATGGAAACATCAATACAAGCGATGAAA...GTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATTTGTCTGGCCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR TCA 90 bp TGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACATGGTACTAGGATGCTGTGATTGTTaGGTTTTCAGGTTGACTTTT +
Preference number: 4 (lower is better)
Translates to: CSYNIYSSMPESNYDMVLGCCDC*VFRLTF
Trigger: AAAAGTCAACCTGAAAACTCAACAATCACAGCATCC...TAGTACCATGTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR TCA 90 bp AATACAATGTGTGAAGCCTTGAACGTAGGAGATTTTAGATCCAGATGCTGTGAAGGATGCTGTGATTGTTaGGTTTTCAGGTTGACTTTT +
Preference number: 4 (lower is better)
Translates to: NTMCEALNVGDFRSRCCEGCCDC*VFRLTF
Trigger: AAAAGTCAACCTGAAAACTCAACAATCACAGCATCC...TTCACAGCATCTGGATCTAAAATCTCCTACGTTCAAGGCTTCACACATTGTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382269.7
ENST00000539820.5
ENST00000617910.3
ENST00000629774.2
CDS-3UTR TCA 90 bp AGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACATGGTACTAGATATCCGTTGGATGCTGTaGTTGTTGAGTTTTCAGGTT +
Preference number: 4 (lower is better)
Translates to: SYNIYSSMPESNYDMVLDIRWML*LLSFQV
Trigger: AACCTGAAAACTCAACAATCACAGCATCCAACGGAT...ATCTAGTACCATGTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR GCA 90 bp AAATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACATGGTAACATCCAGACATGTTTaGAATGATGCTCAGCAGATC +
Preference number: 4 (lower is better)
Translates to: KCSYNIYSSMPESNYDMVTSRHV*NDAQQI
Trigger: GATCTGCTGAGCATCATTGCAAACATGTCTGGATGT...TACCATGTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR CCA 90 bp AGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACATGGTACTAGATGGAAAACATGGGTTTTaGTTCTCACAAGTCATCTGG +
Preference number: 4 (lower is better)
Translates to: SYNIYSSMPESNYDMVLDGKHGF*FSQVIW
Trigger: CCAGATGACTTGTGAGAACCAAAACCCATGTTTTCC...ATCTAGTACCATGTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR TCA 90 bp AGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACATGGTACTAGATACCTCATTTGAAACTTaGATGACATGTCTTGTCACC +
Preference number: 4 (lower is better)
Translates to: SYNIYSSMPESNYDMVLDTSFET*MTCLVT
Trigger: GGTGACAAGACATGTCATTCAAGTTTCAAATGAGGT...ATCTAGTACCATGTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR CCA 90 bp GACAAATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACATGTTGTATGGGAAAACATaGGTTTTGGTTCTCACAAGT +
Preference number: 4 (lower is better)
Translates to: DKCSYNIYSSMPESNYDMLYGKT*VLVLTS
Trigger: ACTTGTGAGAACCAAAACCCATGTTTTCCCATACAA...CATGTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATTTGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR CCA 90 bp TGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACATGGTACTATTGTATGGGAAAACATaGGTTTTGGTTCTCACAAGT +
Preference number: 4 (lower is better)
Translates to: CSYNIYSSMPESNYDMVLLYGKT*VLVLTS
Trigger: ACTTGTGAGAACCAAAACCCATGTTTTCCCATACAA...TAGTACCATGTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR CCA 90 bp AATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACATGGTACGGGAAAACAACAGTCTaGTATTTTTGGGTCACAAAA +
Preference number: 4 (lower is better)
Translates to: NAAITFIHPCLRVTTTWYGKTTV*YFWVTK
Trigger: TTTTGTGACCCAAAAATACCAGACTGTTGTTTTCCC...GTACCATGTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329066.9
ENST00000422464.5
CDS GCA 90 bp GGCCGTCTCCGGCCAGGAAGCAGGGCCCGCGGGTCTCTCCGGGGATaGCGGGCTCGGGCGCACAGGCCGCAGGCGCGCGTGGCGGCACGA +
Preference number: 5 (lower is better)
Translates to: GRLRPGSRARGSLRG*RARAHRPQARVAAR
Trigger: TCGTGCCGCCACGCGCGCCTGCGGCCTGTGCGCCCGAGCCCGGCATCCCCGGAGAGACCCGCGGGCCCTGCTTCCTGGCCGGAGACGGCC
80% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000613631.2
ENST00000622050.4
ENST00000625793.2
ENST00000627010.2
ENST00000627917.2
CDS CCA 90 bp CTCTCCGGGGATGCCGGGCTCGGGCGCACAGGCCGCAGGCGCGCGTaGCGGCACGAAGGGCAGGTAGGCGCGGCCGGAGTCCCGGAGGCG +
Preference number: 5 (lower is better)
Translates to: LSGDAGLGRTGRRRA*RHEGQVGAAGVPEA
Trigger: CGCCTCCGGGACTCCGGCCGCGCCTACCTGCCCTTCGTGCCGCCACGCGCGCCTGCGGCCTGTGCGCCCGAGCCCGGCATCCCCGGAGAG
80% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000613631.2
ENST00000622050.4
ENST00000625793.2
ENST00000627010.2
ENST00000627917.2
CDS GCA 90 bp CGGTGCCGCAGGCGGCCGAAGAGCGGTAGAAGGGCAGACAGGCGGTaGCCGCGGCCGGCCGGGCCTCCTCCGGGAGTTGTATGGGAAAAC +
Preference number: 5 (lower is better)
Translates to: RCRRRPKSGRRADRR*PRPAGPPPGVVWEN
Trigger: GTTTTCCCATACAACTCCCGGAGGAGGCCCGGCCGGCCGCGGGCACCGCCTGTCTGCCCTTCTACCGCTCTTCGGCCGCCTGCGGCACCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000613631.2
ENST00000622050.4
ENST00000625793.2
ENST00000627010.2
ENST00000627917.2
CDS CCA 90 bp CGGAGTCCCGGAGGCGCGCGTGGACGCGGAGCAGCCCTTCGGCACTaGTCCAGTTCCGCAGCTGCCTCTCTAGGGCCGGGGAGCTGCCAT +
Preference number: 5 (lower is better)
Translates to: RSPGGARGRGAALRH*SSSAAASLGPGSCH
Trigger: ATGGCAGCTCCCCGGCCCTAGAGAGGCAGCTGCGGAACTGGACCAGTGCCGAAGGGCTGCTCCGCGTCCACGCGCGCCTCCGGGACTCCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000613631.2
ENST00000622050.4
ENST00000625793.2
ENST00000627010.2
ENST00000627917.2
CDS CCA 90 bp CCTGGTGCAGCCACAGCCCGGGCAGGTCGGGGTGCTCCTGGAAGCTaGCGTCCAGCCTCCTCACCAGCGGGTGGATCGTGGCATGGCCGA +
Preference number: 5 (lower is better)
Translates to: PGAATARAGRGAPGS*RPASSPAGGSWHGR
Trigger: TCGGCCATGCCACGATCCACCCGCTGGTGAGGAGGCTGGACGCCAGCTTCCAGGAGCACCCCGACCTGCCCGGGCTGTGGCTGCACCAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 20 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382198.5
ENST00000382201.7
ENST00000422464.5
ENST00000446278.5
ENST00000462973.5
ENST00000469607.3
ENST00000497517.6
ENST00000613631.2
ENST00000622050.4
ENST00000625313.2
ENST00000625793.2
ENST00000626753.2
ENST00000626995.2
ENST00000627010.2
ENST00000627917.2
ENST00000630089.2
ENST00000630235.2
CDS GCA 90 bp GGTTGGCCGTGGACAGGTTCCCAAAGAGCGCGCCTTGGTCCCCGGTaGCGCAGGCGGCCGAAGAGCGGTAGAAGGGCAGACAGGCGGTGC +
Preference number: 5 (lower is better)
Translates to: GWPWTGSQRARLGPR*RRRPKSGRRADRRC
Trigger: GCACCGCCTGTCTGCCCTTCTACCGCTCTTCGGCCGCCTGCGGCACCGGGGACCAAGGCGCGCTCTTTGGGAACCTGTCCACGGCCAACC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000613631.2
ENST00000622050.4
ENST00000625793.2
ENST00000627010.2
ENST00000627917.2
CDS GCA 90 bp GCGTGGACGCGGAGCAGCCCTTCGGCACTGGTCCAGTTCCGCAGCTaGCTCTCTAGGGCCGGGGAGCTGCCATACACGGTGGACGCGTCC +
Preference number: 5 (lower is better)
Translates to: AWTRSSPSALVQFRS*LSRAGELPYTVDAS
Trigger: GGACGCGTCCACCGTGTATGGCAGCTCCCCGGCCCTAGAGAGGCAGCTGCGGAACTGGACCAGTGCCGAAGGGCTGCTCCGCGTCCACGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000613631.2
ENST00000622050.4
ENST00000625793.2
ENST00000627010.2
ENST00000627917.2
CDS TCA 90 bp GGTGTGGCCCACCTGCTCCGAGTCCTGAGCTGCGGCCCGCTGCGGTaGGGTCCCTACGGCCTGGTGCTTTCCGCATCTCAGCTCGGGAGT +
Preference number: 5 (lower is better)
Translates to: GVAHLLRVLSCGPLR*GPYGLVLSASQLGS
Trigger: ACTCCCGAGCTGAGATGCGGAAAGCACCAGGCCGTAGGGACCTCACCGCAGCGGGCCGCAGCTCAGGACTCGGAGCAGGTGGGCCACACC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422464.5
ENST00000625793.2
CDS-3UTR CAA 90 bp ATGAGGACGGCAGCTTTACAGGGTCGCGTGGCTAACGGTGCCCCCGAGACTGCCCGTGCCAGGGCCGTGTaGGAGGCGCCCCATCTGGGG +
Preference number: 5 (lower is better)
Translates to: MRTAALQGRVANGAPETARARAV*EAPHLG
Trigger: CCCCAGATGGGGCGCCTCCAACACGGCCCTGGCACG...GGCAGTCTCGGGGGCACCGTTAGCCACGCGACCCTGTAAAGCTGCCGTCCTCAT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329066.9
ENST00000422464.5
CDS TCA 90 bp CCCAGCACTCTCCTGCTCCGAGTCCTGAGCTGCGGCCCGCTGCGGTaGGGTCCCTACGGCCTGGTGCTTTCCGCATCTCAGCTCGGGAGT +
Preference number: 5 (lower is better)
Translates to: PSTLLLRVLSCGPLR*GPYGLVLSASQLGS
Trigger: ACTCCCGAGCTGAGATGCGGAAAGCACCAGGCCGTAGGGACCTCACCGCAGCGGGCCGCAGCTCAGGACTCGGAGCAGGAGAGTGCTGGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382198.5
ENST00000382201.7
ENST00000425083.3
ENST00000469607.3
ENST00000613631.2
ENST00000622050.4
CDS CCA 90 bp CCAGGAACGAGGTCAACCCGTTCATCTGCTGCCGCGGGTTGGCCGTaGACAGGTTCCCAAAGAGCGCGCCTTGGTCCCCGGTGCCGCAGG +
Preference number: 5 (lower is better)
Translates to: PGTRSTRSSAAAGWP*TGSQRARLGPRCRR
Trigger: CCTGCGGCACCGGGGACCAAGGCGCGCTCTTTGGGAACCTGTCCACGGCCAACCCGCGGCAGCAGATGAACGGGTTGACCTCGTTCCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000613631.2
ENST00000622050.4
ENST00000625793.2
ENST00000627010.2
ENST00000627917.2
CDS CCA 90 bp TCGGGGTGCTCCTGGAAGCTGGCGTCCAGCCTCCTCACCAGCGGGTaGATCGTGGCATGGCCGAAGCGGAAGGCGGCTGTGGAGAACACG +
Preference number: 5 (lower is better)
Translates to: SGCSWKLASSLLTSG*IVAWPKRKAAVENT
Trigger: CGTGTTCTCCACAGCCGCCTTCCGCTTCGGCCATGCCACGATCCACCCGCTGGTGAGGAGGCTGGACGCCAGCTTCCAGGAGCACCCCGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 20 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382198.5
ENST00000382201.7
ENST00000422464.5
ENST00000446278.5
ENST00000462973.5
ENST00000469607.3
ENST00000497517.6
ENST00000613631.2
ENST00000622050.4
ENST00000625313.2
ENST00000625793.2
ENST00000626753.2
ENST00000626995.2
ENST00000627010.2
ENST00000627917.2
ENST00000630089.2
ENST00000630235.2
CDS CCA 90 bp AAGAAAGCCTGGTGCAGCCACAGCCCGGGCAGGTCGGGGTGCTCCTaGAAGCTGGCGTCCAGCCTCCTCACCAGCGGGTGGATCGTGGCA +
Preference number: 5 (lower is better)
Translates to: KKAWCSHSPGRSGCS*KLASSLLTSGWIVA
Trigger: TGCCACGATCCACCCGCTGGTGAGGAGGCTGGACGCCAGCTTCCAGGAGCACCCCGACCTGCCCGGGCTGTGGCTGCACCAGGCTTTCTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 20 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382198.5
ENST00000382201.7
ENST00000422464.5
ENST00000446278.5
ENST00000462973.5
ENST00000469607.3
ENST00000497517.6
ENST00000613631.2
ENST00000622050.4
ENST00000625313.2
ENST00000625793.2
ENST00000626753.2
ENST00000626995.2
ENST00000627010.2
ENST00000627917.2
ENST00000630089.2
ENST00000630235.2
CDS TCA 90 bp CAGCTGGAAACATGCGGCATGGTGTGGCCCACCTGCTCCGAGTCCTaGGCTGCGGCCCGCTGCGGTGAGGTCCCTACGGCCTGGTGCTTT +
Preference number: 5 (lower is better)
Translates to: QLETCGMVWPTCSES*AAARCGEVPTAWCF
Trigger: AAAGCACCAGGCCGTAGGGACCTCACCGCAGCGGGCCGCAGCTCAGGACTCGGAGCAGGTGGGCCACACCATGCCGCATGTTTCCAGCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422464.5
ENST00000625793.2
CDS CCA 90 bp ACGCGTCCAGGAACGAGGTCAACCCGTTCATCTGCTGCCGCGGGTTaGCCGTGGACAGGTTCCCAAAGAGCGCGCCTTGGTCCCCGGTGC +
Preference number: 5 (lower is better)
Translates to: TRPGTRSTRSSAAAG*PWTGSQRARLGPRC
Trigger: GCACCGGGGACCAAGGCGCGCTCTTTGGGAACCTGTCCACGGCCAACCCGCGGCAGCAGATGAACGGGTTGACCTCGTTCCTGGACGCGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000613631.2
ENST00000622050.4
ENST00000625793.2
ENST00000627010.2
ENST00000627917.2
CDS CCA 90 bp AGGGTGATGATCTGGTGCAGAGCGCCCACGACCTTGCGCGCCTCCTaGTACACGGCGTCCGCGCTCCAGTGCGCATTGAGGGCCTTGAGC +
Preference number: 5 (lower is better)
Translates to: RVMIWCRAPTTLRAS*YTASALQCALRALS
Trigger: GCTCAAGGCCCTCAATGCGCACTGGAGCGCGGACGCCGTGTACCAGGAGGCGCGCAAGGTCGTGGGCGCTCTGCACCAGATCATCACCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000613631.2
ENST00000622050.4
ENST00000625793.2
ENST00000627010.2
ENST00000627917.2
CDS CCA 90 bp GCTTGTACAAGTCCAGGATCTTGTCGGCCACGCTCCTGCTGGCGATaGCTGTGCTCAGGTCAGCGGGGGTCTCCAGGCGAGGCAGGCCGC +
Preference number: 5 (lower is better)
Translates to: ACTSPGSCRPRSCWR*LCSGQRGSPGEAGR
Trigger: GCGGCCTGCCTCGCCTGGAGACCCCCGCTGACCTGAGCACAGCCATCGCCAGCAGGAGCGTGGCCGACAAGATCCTGGACTTGTACAAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 20 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382198.5
ENST00000382201.7
ENST00000422464.5
ENST00000446278.5
ENST00000462973.5
ENST00000469607.3
ENST00000497517.6
ENST00000613631.2
ENST00000622050.4
ENST00000625313.2
ENST00000625793.2
ENST00000626753.2
ENST00000626995.2
ENST00000627010.2
ENST00000627917.2
ENST00000630089.2
ENST00000630235.2
CDS CCA 90 bp CAGATCCTGTCCAACCACTGCGGTGGCAGCTGGAAACATGCGGCATaGTGTGGCCCACCTGCTCCGAGTCCTGAGCTGCGGCCCGCTGCG +
Preference number: 5 (lower is better)
Translates to: QILSNHCGGSWKHAA*CGPPAPSPELRPAA
Trigger: CGCAGCGGGCCGCAGCTCAGGACTCGGAGCAGGTGGGCCACACCATGCCGCATGTTTCCAGCTGCCACCGCAGTGGTTGGACAGGATCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422464.5
ENST00000625793.2
CDS-3UTR CAA 90 bp AGGACGGCAGCTTTACAGGGTCGCGTGGCTAACGGTGCCCCCGAGACTGCCTTGAGAGCGCCCACGACCTaGCGCGCCTCCTGGTACACG +
Preference number: 5 (lower is better)
Translates to: RTAALQGRVANGAPETALRAPTT*RASWYT
Trigger: CGTGTACCAGGAGGCGCGCAAGGTCGTGGGCGCTCT...CAAGGCAGTCTCGGGGGCACCGTTAGCCACGCGACCCTGTAAAGCTGCCGTCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329066.9
ENST00000422464.5
CDS GCA 90 bp CGGCACTGGTCCAGTTCCGCAGCTGCCTCTCTAGGGCCGGGGAGCTaGCATACACGGTGGACGCGTCCAGGAACGAGGTCAACCCGTTCA +
Preference number: 5 (lower is better)
Translates to: RHWSSSAAASLGPGS*HTRWTRPGTRSTRS
Trigger: TGAACGGGTTGACCTCGTTCCTGGACGCGTCCACCGTGTATGGCAGCTCCCCGGCCCTAGAGAGGCAGCTGCGGAACTGGACCAGTGCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000613631.2
ENST00000622050.4
ENST00000625793.2
ENST00000627010.2
ENST00000627917.2
CDS CCA 90 bp AGTTCCGCAGCTGCCTCTCTAGGGCCGGGGAGCTGCCATACACGGTaGACGCGTCCAGGAACGAGGTCAACCCGTTCATCTGCTGCCGCG +
Preference number: 5 (lower is better)
Translates to: SSAAASLGPGSCHTR*TRPGTRSTRSSAAA
Trigger: CGCGGCAGCAGATGAACGGGTTGACCTCGTTCCTGGACGCGTCCACCGTGTATGGCAGCTCCCCGGCCCTAGAGAGGCAGCTGCGGAACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000613631.2
ENST00000622050.4
ENST00000625793.2
ENST00000627010.2
ENST00000627917.2
CDS CCA 90 bp GCTCCTGGAAGCTGGCGTCCAGCCTCCTCACCAGCGGGTGGATCGTaGCATGGCCGAAGCGGAAGGCGGCTGTGGAGAACACGTTGGACA +
Preference number: 5 (lower is better)
Translates to: APGSWRPASSPAGGS*HGRSGRRLWRTRWT
Trigger: TGTCCAACGTGTTCTCCACAGCCGCCTTCCGCTTCGGCCATGCCACGATCCACCCGCTGGTGAGGAGGCTGGACGCCAGCTTCCAGGAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 20 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382198.5
ENST00000382201.7
ENST00000422464.5
ENST00000446278.5
ENST00000462973.5
ENST00000469607.3
ENST00000497517.6
ENST00000613631.2
ENST00000622050.4
ENST00000625313.2
ENST00000625793.2
ENST00000626753.2
ENST00000626995.2
ENST00000627010.2
ENST00000627917.2
ENST00000630089.2
ENST00000630235.2
CDS TCA 90 bp GGAACCCGTTGTACAAGAAGCCGGGGTTCCAGCCTCGGGGCTGACTaGAGCCGTCCTCATAGACTGGAGGGAGCCATCGTGCCAGGGCCG +
Preference number: 5 (lower is better)
Translates to: GTRCTRSRGSSLGAD*SRPHRLEGAIVPGP
Trigger: CGGCCCTGGCACGATGGCTCCCTCCAGTCTATGAGGACGGCTTCAGTCAGCCCCGAGGCTGGAACCCCGGCTTCTTGTACAACGGGTTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382198.5
ENST00000382201.7
ENST00000422464.5
ENST00000613631.2
ENST00000622050.4
ENST00000625313.2
ENST00000625793.2
ENST00000627010.2
ENST00000627917.2
CDS GCA 90 bp TACACGGTGGACGCGTCCAGGAACGAGGTCAACCCGTTCATCTGCTaGCGCGGGTTGGCCGTGGACAGGTTCCCAAAGAGCGCGCCTTGG +
Preference number: 5 (lower is better)
Translates to: YTVDASRNEVNPFIC*RGLAVDRFPKSAPW
Trigger: CCAAGGCGCGCTCTTTGGGAACCTGTCCACGGCCAACCCGCGGCAGCAGATGAACGGGTTGACCTCGTTCCTGGACGCGTCCACCGTGTA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000613631.2
ENST00000622050.4
ENST00000625793.2
ENST00000627010.2
ENST00000627917.2
CDS GCA 90 bp CCATACACGGTGGACGCGTCCAGGAACGAGGTCAACCCGTTCATCTaGTGCCGCGGGTTGGCCGTGGACAGGTTCCCAAAGAGCGCGCCT +
Preference number: 5 (lower is better)
Translates to: PYTVDASRNEVNPFI*CRGLAVDRFPKSAP
Trigger: AGGCGCGCTCTTTGGGAACCTGTCCACGGCCAACCCGCGGCAGCAGATGAACGGGTTGACCTCGTTCCTGGACGCGTCCACCGTGTATGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000613631.2
ENST00000622050.4
ENST00000625793.2
ENST00000627010.2
ENST00000627917.2
CDS GCA 90 bp TCCTGGGTGCAAGTGAGCTGCTCCCGGCCTTGGAGCTCATACCCGTaGCGGCAGGAATACACCAGCACGCGCCTCCCAGACTCCTCACAG +
Preference number: 5 (lower is better)
Translates to: SWVQVSCSRPWSSYP*RQEYTSTRLPDSSQ
Trigger: CTGTGAGGAGTCTGGGAGGCGCGTGCTGGTGTATTCCTGCCGGCACGGGTATGAGCTCCAAGGCCGGGAGCAGCTCACTTGCACCCAGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 16 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382198.5
ENST00000382201.7
ENST00000422464.5
ENST00000446278.5
ENST00000469607.3
ENST00000613631.2
ENST00000622050.4
ENST00000625313.2
ENST00000625793.2
ENST00000626753.2
ENST00000626995.2
ENST00000627010.2
ENST00000627917.2
CDS GCA 90 bp GAGCCCCAGCAGAGCTGCTCCGACACCCAGATCCTGTCCAACCACTaGGGTGGCAGCTGGAAACATGCGGCATGGTGTGGCCCACCTGCT +
Preference number: 5 (lower is better)
Translates to: EPQQSCSDTQILSNH*GGSWKHAAWCGPPA
Trigger: AGCAGGTGGGCCACACCATGCCGCATGTTTCCAGCTGCCACCGCAGTGGTTGGACAGGATCTGGGTGTCGGAGCAGCTCTGCTGGGGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422464.5
ENST00000625793.2
CDS CCA 90 bp TGGAAGCTGGCGTCCAGCCTCCTCACCAGCGGGTGGATCGTGGCATaGCCGAAGCGGAAGGCGGCTGTGGAGAACACGTTGGACACAGTG +
Preference number: 5 (lower is better)
Translates to: WKLASSLLTSGWIVA*PKRKAAVENTLDTV
Trigger: CACTGTGTCCAACGTGTTCTCCACAGCCGCCTTCCGCTTCGGCCATGCCACGATCCACCCGCTGGTGAGGAGGCTGGACGCCAGCTTCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 20 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382198.5
ENST00000382201.7
ENST00000422464.5
ENST00000446278.5
ENST00000462973.5
ENST00000469607.3
ENST00000497517.6
ENST00000613631.2
ENST00000622050.4
ENST00000625313.2
ENST00000625793.2
ENST00000626753.2
ENST00000626995.2
ENST00000627010.2
ENST00000627917.2
ENST00000630089.2
ENST00000630235.2
CDS CCA 90 bp CCAGCAGAGCTGCTCCGACACCCAGATCCTGTCCAACCACTGCGGTaGCAGCTGGAAACATGCGGCATGGTGTGGCCCACCTGCTCCGAG +
Preference number: 5 (lower is better)
Translates to: PAELLRHPDPVQPLR*QLETCGMVWPTCSE
Trigger: CTCGGAGCAGGTGGGCCACACCATGCCGCATGTTTCCAGCTGCCACCGCAGTGGTTGGACAGGATCTGGGTGTCGGAGCAGCTCTGCTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422464.5
ENST00000625793.2
CDS TCA 90 bp AGGGTGATGATCAGGTGGACGGTGGGTAGTGGGCCGCCAAGGTGCTaGCTGACGGAGCCCTTTCTGAGTGAAGGGCCCGGTGTCTCACGG +
Preference number: 5 (lower is better)
Translates to: RVMIRWTVGSGPPRC*LTEPFLSEGPGVSR
Trigger: CCGTGAGACACCGGGCCCTTCACTCAGAAAGGGCTCCGTCAGTCAGCACCTTGGCGGCCCACTACCCACCGTCCACCTGATCATCACCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497517.6
ENST00000630089.2
CDS CCA 90 bp AGCCGTCCTCATAGACTGGAGGGAGCCATCGTGCCAGGGCCGTGTTaGAGGCGCCCCATCTGGGGTGGTCTCTGTTGTTGCAAGCTCCTG +
Preference number: 5 (lower is better)
Translates to: SRPHRLEGAIVPGPC*RRPIWGGLCCCKLL
Trigger: CAGGAGCTTGCAACAACAGAGACCACCCCAGATGGGGCGCCTCCAACACGGCCCTGGCACGATGGCTCCCTCCAGTCTATGAGGACGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382198.5
ENST00000382201.7
ENST00000422464.5
ENST00000613631.2
ENST00000622050.4
ENST00000625313.2
ENST00000625793.2
ENST00000627010.2
ENST00000627917.2
CDS CCA 90 bp TCACCAGCGGGTGGATCGTGGCATGGCCGAAGCGGAAGGCGGCTGTaGAGAACACGTTGGACACAGTGGGGTTGGCGGTGGAGTCATAGC +
Preference number: 5 (lower is better)
Translates to: SPAGGSWHGRSGRRL*RTRWTQWGWRWSHS
Trigger: GCTATGACTCCACCGCCAACCCCACTGTGTCCAACGTGTTCTCCACAGCCGCCTTCCGCTTCGGCCATGCCACGATCCACCCGCTGGTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 20 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382198.5
ENST00000382201.7
ENST00000422464.5
ENST00000446278.5
ENST00000462973.5
ENST00000469607.3
ENST00000497517.6
ENST00000613631.2
ENST00000622050.4
ENST00000625313.2
ENST00000625793.2
ENST00000626753.2
ENST00000626995.2
ENST00000627010.2
ENST00000627917.2
ENST00000630089.2
ENST00000630235.2
CDS CCA 90 bp CAGGATGCTTGTACAAGTCCAGGATCTTGTCGGCCACGCTCCTGCTaGCGATGGCTGTGCTCAGGTCAGCGGGGGTCTCCAGGCGAGGCA +
Preference number: 5 (lower is better)
Translates to: QDACTSPGSCRPRSC*RWLCSGQRGSPGEA
Trigger: TGCCTCGCCTGGAGACCCCCGCTGACCTGAGCACAGCCATCGCCAGCAGGAGCGTGGCCGACAAGATCCTGGACTTGTACAAGCATCCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 20 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382198.5
ENST00000382201.7
ENST00000422464.5
ENST00000446278.5
ENST00000462973.5
ENST00000469607.3
ENST00000497517.6
ENST00000613631.2
ENST00000622050.4
ENST00000625313.2
ENST00000625793.2
ENST00000626753.2
ENST00000626995.2
ENST00000627010.2
ENST00000627917.2
ENST00000630089.2
ENST00000630235.2
CDS CCA 90 bp AGCTGCTCCGACACCCAGATCCTGTCCAACCACTGCGGTGGCAGCTaGAAACATGCGGCATGGTGTGGCCCACCTGCTCCGAGTCCTGAG +
Preference number: 5 (lower is better)
Translates to: SCSDTQILSNHCGGS*KHAAWCGPPAPSPE
Trigger: CTCAGGACTCGGAGCAGGTGGGCCACACCATGCCGCATGTTTCCAGCTGCCACCGCAGTGGTTGGACAGGATCTGGGTGTCGGAGCAGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422464.5
ENST00000625793.2
CDS-3UTR CAA 90 bp TCCAGGCCAGGTCCTTTTGGTTCCATGCGTGGGAGCCAGGTGCAAAGACGAATGGCGCTCCAGTGCGCATaGAGGGCCTTGAGCGCCGCG +
Preference number: 5 (lower is better)
Translates to: SRPGPFGSMRGSQVQRRMALQCA*RALSAA
Trigger: CGCGGCGCTCAAGGCCCTCAATGCGCACTGGAGCGC...CATTCGTCTTTGCACCTGGCTCCCACGCATGGAACCAAAAGGACCTGGCCTGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422464.5
CDS GCA 90 bp TGTCAGGATGCTTGTACAAGTCCAGGATCTTGTCGGCCACGCTCCTaGTGGCGATGGCTGTGCTCAGGTCAGCGGGGGTCTCCAGGCGAG +
Preference number: 5 (lower is better)
Translates to: CQDACTSPGSCRPRS*WRWLCSGQRGSPGE
Trigger: CTCGCCTGGAGACCCCCGCTGACCTGAGCACAGCCATCGCCAGCAGGAGCGTGGCCGACAAGATCCTGGACTTGTACAAGCATCCTGACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 20 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382198.5
ENST00000382201.7
ENST00000422464.5
ENST00000446278.5
ENST00000462973.5
ENST00000469607.3
ENST00000497517.6
ENST00000613631.2
ENST00000622050.4
ENST00000625313.2
ENST00000625793.2
ENST00000626753.2
ENST00000626995.2
ENST00000627010.2
ENST00000627917.2
ENST00000630089.2
ENST00000630235.2
CDS GCA 90 bp CAGAGGGGAGGCTGGAAATCCCATCCTTCCTGGGTGCAAGTGAGCTaGTCCCGGCCTTGGAGCTCATACCCGTGCCGGCAGGAATACACC +
Preference number: 5 (lower is better)
Translates to: QRGGWKSHPSWVQVS*SRPWSSYPCRQEYT
Trigger: GGTGTATTCCTGCCGGCACGGGTATGAGCTCCAAGGCCGGGAGCAGCTCACTTGCACCCAGGAAGGATGGGATTTCCAGCCTCCCCTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382198.5
ENST00000382201.7
ENST00000422464.5
ENST00000446278.5
ENST00000469607.3
ENST00000613631.2
ENST00000622050.4
ENST00000625313.2
ENST00000625793.2
ENST00000626753.2
ENST00000626995.2
ENST00000627010.2
ENST00000627917.2
CDS CCA 90 bp TGGAAATCCCATCCTTCCTGGGTGCAAGTGAGCTGCTCCCGGCCTTaGAGCTCATACCCGTGCCGGCAGGAATACACCAGCACGCGCCTC +
Preference number: 5 (lower is better)
Translates to: WKSHPSWVQVSCSRP*SSYPCRQEYTSTRL
Trigger: GAGGCGCGTGCTGGTGTATTCCTGCCGGCACGGGTATGAGCTCCAAGGCCGGGAGCAGCTCACTTGCACCCAGGAAGGATGGGATTTCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 16 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382198.5
ENST00000382201.7
ENST00000422464.5
ENST00000446278.5
ENST00000469607.3
ENST00000613631.2
ENST00000622050.4
ENST00000625313.2
ENST00000625793.2
ENST00000626753.2
ENST00000626995.2
ENST00000627010.2
ENST00000627917.2
CDS CCA 90 bp CTCCCGGAGTCTTTGCAGAGGGGAGGCTGGAAATCCCATCCTTCCTaGGTGCAAGTGAGCTGCTCCCGGCCTTGGAGCTCATACCCGTGC +
Preference number: 5 (lower is better)
Translates to: LPESLQRGGWKSHPS*VQVSCSRPWSSYPC
Trigger: GCACGGGTATGAGCTCCAAGGCCGGGAGCAGCTCACTTGCACCCAGGAAGGATGGGATTTCCAGCCTCCCCTCTGCAAAGACTCCGGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000346956.7
ENST00000422464.5
ENST00000469607.3
ENST00000622050.4
ENST00000625793.2
ENST00000626995.2
CDS-3UTR CAA 90 bp GTGCTTCCAGCCGATCCTCAGATTAAGTGGAAGCAAACGCCTGAAAGTGAGCCCTGCGCATTGAGGGCCTaGAGCGCCGCGGCCAGGCGG +
Preference number: 5 (lower is better)
Translates to: VLPADPQIKWKQTPESEPCALRA*SAAARR
Trigger: CCGCCTGGCCGCGGCGCTCAAGGCCCTCAATGCGCA...GGGCTCACTTTCAGGCGTTTGCTTCCACTTAATCTGAGGATCGGCTGGAAGCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422464.5
ENST00000625793.2
CDS-3UTR CAA 90 bp ATGAGGACGGCAGCTTTACAGGGTCGCGTGGCTAACGGTGCCCCCGAGACTGCCTACAAGTCCAGGATCTaGTCGGCCACGCTCCTGCTG +
Preference number: 5 (lower is better)
Translates to: MRTAALQGRVANGAPETAYKSRI*SATLLL
Trigger: CAGCAGGAGCGTGGCCGACAAGATCCTGGACTTGTA...GGCAGTCTCGGGGGCACCGTTAGCCACGCGACCCTGTAAAGCTGCCGTCCTCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329066.9
ENST00000422464.5
CDS TCA 90 bp CCCGAGACAGGGAGTGCTTCTCCAGCTCACGCCTCTGTGCATCCGTaGAGACGTGGCTGTTCTCCCACCAAAACCAGTCACCGTCCCGCA +
Preference number: 5 (lower is better)
Translates to: PETGSASPAHASVHP*RRGCSPTKTSHRPA
Trigger: TGCGGGACGGTGACTGGTTTTGGTGGGAGAACAGCCACGTCTTCACGGATGCACAGAGGCGTGAGCTGGAGAAGCACTCCCTGTCTCGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382198.5
ENST00000382201.7
ENST00000422464.5
ENST00000446278.5
ENST00000469607.3
ENST00000613631.2
ENST00000622050.4
ENST00000625313.2
ENST00000625793.2
ENST00000626753.2
ENST00000626995.2
ENST00000627010.2
ENST00000627917.2
CDS TCA 90 bp CTTTGCAGAGGGGAGGCTGGAAATCCCATCCTTCCTGGGTGCAAGTaGGCTGCTCCCGGCCTTGGAGCTCATACCCGTGCCGGCAGGAAT +
Preference number: 5 (lower is better)
Translates to: LCRGEAGNPILPGCK*AAPGLGAHTRAGRN
Trigger: ATTCCTGCCGGCACGGGTATGAGCTCCAAGGCCGGGAGCAGCTCACTTGCACCCAGGAAGGATGGGATTTCCAGCCTCCCCTCTGCAAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382198.5
ENST00000382201.7
ENST00000422464.5
ENST00000446278.5
ENST00000469607.3
ENST00000613631.2
ENST00000622050.4
ENST00000625313.2
ENST00000625793.2
ENST00000626753.2
ENST00000626995.2
ENST00000627010.2
ENST00000627917.2
CDS-3UTR CAA 90 bp CTGTGCTTCCAGCCGATCCTCAGATTAAGTGGAAGCAAACGCCTGAAAGTGAGCCGTGCCAGGGCCGTGTaGGAGGCGCCCCATCTGGGG +
Preference number: 5 (lower is better)
Translates to: LCFQPILRLSGSKRLKVSRARAV*EAPHLG
Trigger: CCCCAGATGGGGCGCCTCCAACACGGCCCTGGCACG...GCTCACTTTCAGGCGTTTGCTTCCACTTAATCTGAGGATCGGCTGGAAGCACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422464.5
ENST00000625793.2
CDS TCA 90 bp GTATTAGTGGGTCCAAACCACCTCCACGGAGTAATGTCCATGGGCTaGAGAAAGCCTGGTGCAGCCACAGCCCGGGCAGGTCGGGGTGCT +
Preference number: 5 (lower is better)
Translates to: VLVGPNHLHGVMSMG*RKPGAATARAGRGA
Trigger: AGCACCCCGACCTGCCCGGGCTGTGGCTGCACCAGGCTTTCTTCAGCCCATGGACATTACTCCGTGGAGGTGGTTTGGACCCACTAATAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382198.5
ENST00000422464.5
ENST00000613631.2
ENST00000622050.4
ENST00000625313.2
ENST00000625793.2
ENST00000627010.2
CDS TCA 90 bp TGCAGTGTCCTGCCACTTTGCCCTCAGAGGGCTCTCGGCAGCCTGTaGGTATCCCGGCCTTCCATCCCAGCACTCTCCACCTGCAAATCA +
Preference number: 5 (lower is better)
Translates to: CSVLPLCPQRALGSL*VSRPSIPALSTCKS
Trigger: TGATTTGCAGGTGGAGAGTGCTGGGATGGAAGGCCGGGATACTCACAGGCTGCCGAGAGCCCTCTGAGGGCAAAGTGGCAGGACACTGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000446278.5
ENST00000479902.1
ENST00000497517.6
CDS TCA 90 bp TATATCCAAAACAGGTGGACGGTGGGTAGTGGGCCGCCAAGGTGCTaGCTGACGGAGCCCTTTCTGAGTGAAGGGCCCGGTGTCTCACGG +
Preference number: 5 (lower is better)
Translates to: YIQNRWTVGSGPPRC*LTEPFLSEGPGVSR
Trigger: CCGTGAGACACCGGGCCCTTCACTCAGAAAGGGCTCCGTCAGTCAGCACCTTGGCGGCCCACTACCCACCGTCCACCTGTTTTGGATATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650224.1
CDS TCA 90 bp CCACGGGTCTCTGCGGCTCTTCCGCCTCTGCTATTGCAGGCAGAGTaGCTGCACGTGCCCACCCACTCACAGGAGCACATGGCTTTAACT +
Preference number: 5 (lower is better)
Translates to: PRVSAALPPLLLQAE*LHVPTHSQEHMALT
Trigger: AGTTAAAGCCATGTGCTCCTGTGAGTGGGTGGGCACGTGCAGTCACTCTGCCTGCAATAGCAGAGGCGGAAGAGCCGCAGAGACCCGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650224.1
CDS GCA 90 bp CTGTTCTCCCACCAAAACCAGTCACCGTCCCGCAGAGCCTTCATCTaGTTCCCAATGAGACAGGCAAACAGGGGCCCTGTCCGAGCCCTG +
Preference number: 5 (lower is better)
Translates to: LFSHQNQSPSRRAFI*FPMRQANRGPVRAL
Trigger: CAGGGCTCGGACAGGGCCCCTGTTTGCCTGTCTCATTGGGAAGCAGATGAAGGCTCTGCGGGACGGTGACTGGTTTTGGTGGGAGAACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 16 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382198.5
ENST00000382201.7
ENST00000422464.5
ENST00000446278.5
ENST00000469607.3
ENST00000613631.2
ENST00000622050.4
ENST00000625313.2
ENST00000625793.2
ENST00000626753.2
ENST00000626995.2
ENST00000627010.2
ENST00000627917.2
CDS GCA 90 bp ACCCTGGTGAGGCCAGTGTTGTCACAGATGACCCGAGACAGGGAGTaGTTCTCCAGCTCACGCCTCTGTGCATCCGTGAAGACGTGGCTG +
Preference number: 5 (lower is better)
Translates to: TLVRPVLSQMTRDRE*FSSSRLCASVKTWL
Trigger: CAGCCACGTCTTCACGGATGCACAGAGGCGTGAGCTGGAGAAGCACTCCCTGTCTCGGGTCATCTGTGACAACACTGGCCTCACCAGGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 16 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382198.5
ENST00000382201.7
ENST00000422464.5
ENST00000446278.5
ENST00000469607.3
ENST00000613631.2
ENST00000622050.4
ENST00000625313.2
ENST00000625793.2
ENST00000626753.2
ENST00000626995.2
ENST00000627010.2
ENST00000627917.2
CDS GCA 90 bp CTGCACACTCGTTCACATCAGTCACCGTCCCGCAGAGCCTTCATCTaGTTCCCAATGAGACAGGCAAACAGGGGCCCTGTCCGAGCCCTG +
Preference number: 5 (lower is better)
Translates to: LHTRSHQSPSRRAFI*FPMRQANRGPVRAL
Trigger: CAGGGCTCGGACAGGGCCCCTGTTTGCCTGTCTCATTGGGAAGCAGATGAAGGCTCTGCGGGACGGTGACTGATGTGAACGAGTGTGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497517.6
ENST00000630089.2
CDS CCA 90 bp GGAAGGCGGCTGTGGAGAACACGTTGGACACAGTGGGGTTGGCGGTaGAGTCATAGCCTTCATAGGGACCCACGTACTGCTGGAAGGCCT +
Preference number: 5 (lower is better)
Translates to: GRRLWRTRWTQWGWR*SHSLHRDPRTAGRP
Trigger: AGGCCTTCCAGCAGTACGTGGGTCCCTATGAAGGCTATGACTCCACCGCCAACCCCACTGTGTCCAACGTGTTCTCCACAGCCGCCTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382198.5
ENST00000382201.7
ENST00000422464.5
ENST00000497517.6
ENST00000613631.2
ENST00000622050.4
ENST00000625313.2
ENST00000625793.2
ENST00000627010.2
ENST00000627917.2
ENST00000630089.2
CDS CCA 90 bp CGAAGCGGAAGGCGGCTGTGGAGAACACGTTGGACACAGTGGGGTTaGCGGTGGAGTCATAGCCTTCATAGGGACCCACGTACTGCTGGA +
Preference number: 5 (lower is better)
Translates to: RSGRRLWRTRWTQWG*RWSHSLHRDPRTAG
Trigger: TCCAGCAGTACGTGGGTCCCTATGAAGGCTATGACTCCACCGCCAACCCCACTGTGTCCAACGTGTTCTCCACAGCCGCCTTCCGCTTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382198.5
ENST00000382201.7
ENST00000422464.5
ENST00000497517.6
ENST00000613631.2
ENST00000622050.4
ENST00000625313.2
ENST00000625793.2
ENST00000627010.2
ENST00000627917.2
ENST00000630089.2
CDS CCA 90 bp CATGGCCGAAGCGGAAGGCGGCTGTGGAGAACACGTTGGACACAGTaGGGTTGGCGGTGGAGTCATAGCCTTCATAGGGACCCACGTACT +
Preference number: 5 (lower is better)
Translates to: HGRSGRRLWRTRWTQ*GWRWSHSLHRDPRT
Trigger: AGTACGTGGGTCCCTATGAAGGCTATGACTCCACCGCCAACCCCACTGTGTCCAACGTGTTCTCCACAGCCGCCTTCCGCTTCGGCCATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382198.5
ENST00000382201.7
ENST00000422464.5
ENST00000497517.6
ENST00000613631.2
ENST00000622050.4
ENST00000625313.2
ENST00000625793.2
ENST00000627010.2
ENST00000627917.2
ENST00000630089.2
CDS-3UTR CAA 90 bp TCTTCCCAGGAGAAGAGGGAAGCCAGATGTAGGCCCTGTGGACACCTGGTGATGCCCCCGAAGGCAGCTTaGCTGGTGCTCTGTGGTGTG +
Preference number: 5 (lower is better)
Translates to: SSQEKREARCRPCGHLVMPPKAA*LVLCGV
Trigger: CACACCACAGAGCACCAGCAAAGCTGCCTTCGGGGG...CATCACCAGGTGTCCACAGGGCCTACATCTGGCTTCCCTCTTCTCCTGGGAAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329066.9
ENST00000422464.5
CDS-3UTR CAA 90 bp TGCTTCCAGCCGATCCTCAGATTAAGTGGAAGCAAACGCCTGAAAGTGAGCCCTGCGCTCCAGTGCGCATaGAGGGCCTTGAGCGCCGCG +
Preference number: 5 (lower is better)
Translates to: CFQPILRLSGSKRLKVSPALQCA*RALSAA
Trigger: CGCGGCGCTCAAGGCCCTCAATGCGCACTGGAGCGC...AGGGCTCACTTTCAGGCGTTTGCTTCCACTTAATCTGAGGATCGGCTGGAAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422464.5
ENST00000625793.2
CDS-3UTR CAA 90 bp GTGCTTCCAGCCGATCCTCAGATTAAGTGGAAGCAAACGCCTGAAAGTGAGCCCAGAGCGCCCACGACCTaGCGCGCCTCCTGGTACACG +
Preference number: 5 (lower is better)
Translates to: VLPADPQIKWKQTPESEPRAPTT*RASWYT
Trigger: CGTGTACCAGGAGGCGCGCAAGGTCGTGGGCGCTCT...GGGCTCACTTTCAGGCGTTTGCTTCCACTTAATCTGAGGATCGGCTGGAAGCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422464.5
ENST00000625793.2
CDS-3UTR CAA 90 bp GAAATGAGGACGGCAGCTTTACAGGGTCGCGTGGCTAACGGTGCCCCCGAGACTGGGGAATTTGCCGACTaGGAAGGCATCCATGGGCAC +
Preference number: 5 (lower is better)
Translates to: EMRTAALQGRVANGAPETGEFAD*EGIHGH
Trigger: GTGCCCATGGATGCCTTCCAAGTCGGCAAATTCCCC...AGTCTCGGGGGCACCGTTAGCCACGCGACCCTGTAAAGCTGCCGTCCTCATTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329066.9
ENST00000422464.5
CDS-3UTR CAA 90 bp GAAATGAGGACGGCAGCTTTACAGGGTCGCGTGGCTAACGGTGCCCCCGAGACTCTCCTAACTATTGCCTaGCGTGAGGCTGAGGGCTGC +
Preference number: 5 (lower is better)
Translates to: EMRTAALQGRVANGAPETLLTIA*REAEGC
Trigger: GCAGCCCTCAGCCTCACGCAAGGCAATAGTTAGGAG...AGTCTCGGGGGCACCGTTAGCCACGCGACCCTGTAAAGCTGCCGTCCTCATTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329066.9
ENST00000422464.5
CDS-3UTR CAA 90 bp ATGAGGACGGCAGCTTTACAGGGTCGCGTGGCTAACGGTGCCCCCGAGACTGCCCTTCCGGACAAATGCTaGTTTGCAGGAGGCCACAGA +
Preference number: 5 (lower is better)
Translates to: MRTAALQGRVANGAPETALPDKC*FAGGHR
Trigger: TCTGTGGCCTCCTGCAAACAAGCATTTGTCCGGAAG...GGCAGTCTCGGGGGCACCGTTAGCCACGCGACCCTGTAAAGCTGCCGTCCTCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000422464.5
CDS CCA 90 bp TCGTTCACATCTTTGCAGAGGGGAGGCTGGAAATCCCATCCTTCCTaGGTGCAAGTGAGCTGCTCCCGGCCTTGGAGCTCATACCCGTGC +
Preference number: 5 (lower is better)
Translates to: SFTSLQRGGWKSHPS*VQVSCSRPWSSYPC
Trigger: GCACGGGTATGAGCTCCAAGGCCGGGAGCAGCTCACTTGCACCCAGGAAGGATGGGATTTCCAGCCTCCCCTCTGCAAAGATGTGAACGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000382198.5
ENST00000382201.7
ENST00000446278.5
ENST00000613631.2
ENST00000625313.2
ENST00000626753.2
ENST00000627010.2
ENST00000627917.2
CDS-3UTR CAA 90 bp GAAATGAGGACGGCAGCTTTACAGGGTCGCGTGGCTAACGGTGCCCCCGAGACTCTGGGGTGGTCTCTGTaGTTGCAAGCTCCTGTGATG +
Preference number: 5 (lower is better)
Translates to: EMRTAALQGRVANGAPETLGWSL*LQAPVM
Trigger: CATCACAGGAGCTTGCAACAACAGAGACCACCCCAG...AGTCTCGGGGGCACCGTTAGCCACGCGACCCTGTAAAGCTGCCGTCCTCATTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329066.9
ENST00000422464.5
CDS GCA 90 bp ACAGATGACCCGAGACAGGGAGTGCTTCTCCAGCTCACGCCTCTGTaGATCCGTGAAGACGTGGCTGTTCTCCCACCAAAACCAGTCACC +
Preference number: 5 (lower is better)
Translates to: TDDPRQGVLLQLTPL*IREDVAVLPPKPVT
Trigger: GGTGACTGGTTTTGGTGGGAGAACAGCCACGTCTTCACGGATGCACAGAGGCGTGAGCTGGAGAAGCACTCCCTGTCTCGGGTCATCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382198.5
ENST00000382201.7
ENST00000422464.5
ENST00000446278.5
ENST00000469607.3
ENST00000613631.2
ENST00000622050.4
ENST00000625313.2
ENST00000625793.2
ENST00000626753.2
ENST00000626995.2
ENST00000627010.2
ENST00000627917.2
CDS-3UTR CAA 90 bp TCATCCATGCCTGAGAGTAACTACGACATGGTACTAGATTTACCCGTGTTGGGACGTGCCAGGGCCGTGTaGGAGGCGCCCCATCTGGGG +
Preference number: 5 (lower is better)
Translates to: SSMPESNYDMVLDLPVLGRARAV*EAPHLG
Trigger: CCCCAGATGGGGCGCCTCCAACACGGCCCTGGCACG...TCCCAACACGGGTAAATCTAGTACCATGTCGTAGTTACTCTCAGGCATGGATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR CAA 90 bp TGCTTCCAGCCGATCCTCAGATTAAGTGGAAGCAAACGCCTGAAAGTGAGCCCTATCTGCTGCCGCGGGTaGGCCGTGGACAGGTTCCCA +
Preference number: 5 (lower is better)
Translates to: CFQPILRLSGSKRLKVSPICCRG*AVDRFP
Trigger: TGGGAACCTGTCCACGGCCAACCCGCGGCAGCAGAT...AGGGCTCACTTTCAGGCGTTTGCTTCCACTTAATCTGAGGATCGGCTGGAAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422464.5
ENST00000625793.2
CDS-3UTR CAA 90 bp CCTGAGAGTAACTACGACATGGTACTAGATTTACCCGTGTTGGGAAAACAGTCGTGCGCATTGAGGGCCTaGAGCGCCGCGGCCAGGCGG +
Preference number: 5 (lower is better)
Translates to: PESNYDMVLDLPVLGKQSCALRA*SAAARR
Trigger: CCGCCTGGCCGCGGCGCTCAAGGCCCTCAATGCGCA...CGACTGTTTTCCCAACACGGGTAAATCTAGTACCATGTCGTAGTTACTCTCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR CAA 90 bp ATGAGGACGGCAGCTTTACAGGGTCGCGTGGCTAACGGTGCCCCCGAGACTGCCAGCCAGACATCGATGTaGTCAGGATGCTTGTACAAG +
Preference number: 5 (lower is better)
Translates to: MRTAALQGRVANGAPETASQTSM*SGCLYK
Trigger: CTTGTACAAGCATCCTGACAACATCGATGTCTGGCT...GGCAGTCTCGGGGGCACCGTTAGCCACGCGACCCTGTAAAGCTGCCGTCCTCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329066.9
ENST00000422464.5
CDS-3UTR CAA 90 bp GAAATGAGGACGGCAGCTTTACAGGGTCGCGTGGCTAACGGTGCCCCCGAGACTGCCACACTTGTCGTCTaGAGGAAAGGTTTCCCTCCA +
Preference number: 5 (lower is better)
Translates to: EMRTAALQGRVANGAPETATLVV*RKGFPP
Trigger: TGGAGGGAAACCTTTCCTCAAGACGACAAGTGTGGC...AGTCTCGGGGGCACCGTTAGCCACGCGACCCTGTAAAGCTGCCGTCCTCATTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329066.9
ENST00000422464.5
CDS-3UTR CAA 90 bp CTCCTTCCTCTCCTGTGCTTCCAGCCGATCCTCAGATTAAGTGGAAGCAAACGCGCCCCCGAGACTGCCTaGTTGAGTCAGGGAGGGAGT +
Preference number: 5 (lower is better)
Translates to: LLPLLCFQPILRLSGSKRAPETA*LSQGGS
Trigger: ACTCCCTCCCTGACTCAACAAGGCAGTCTCGGGGGC...GCGTTTGCTTCCACTTAATCTGAGGATCGGCTGGAAGCACAGGAGAGGAAGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000422464.5
CDS-3UTR CAA 90 bp ATGAGGACGGCAGCTTTACAGGGTCGCGTGGCTAACGGTGCCCCCGAGACTGCCCAGATGTGTCTGAGTTaGCTTTCAATGCCGAAGGAC +
Preference number: 5 (lower is better)
Translates to: MRTAALQGRVANGAPETAQMCLS*LSMPKD
Trigger: GTCCTTCGGCATTGAAAGCAAACTCAGACACATCTG...GGCAGTCTCGGGGGCACCGTTAGCCACGCGACCCTGTAAAGCTGCCGTCCTCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329066.9
ENST00000422464.5
CDS-3UTR CAA 90 bp CAGGACCCAGGGGCAGGCTTTGCAGGTGGATGTAGACGTCATTGGAGAAAAGCTACCCAGGGGCAGGCTTaGCAGGTGGATGTAGACGTC +
Preference number: 5 (lower is better)
Translates to: QDPGAGFAGGCRRHWRKATQGQA*QVDVDV
Trigger: GACGTCTACATCCACCTGCAAAGCCTGCCCCTGGGT...AGCTTTTCTCCAATGACGTCTACATCCACCTGCAAAGCCTGCCCCTGGGTCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000382269.7
ENST00000539820.5
ENST00000617910.3
ENST00000629774.2
CDS-3UTR CAA 90 bp TTGTGTGGTCAGCAGAGATTCTCCCAGGAGCGTCAGTGGAGCCCGCCCAGCAGCCAATCACTCCGCTTGTaGGCTCAGGAAGTTTGGAAA +
Preference number: 5 (lower is better)
Translates to: LCGQQRFSQERQWSPPSSQSLRL*AQEVWK
Trigger: TTTCCAAACTTCCTGAGCCAACAAGCGGAGTGATTG...GCTGCTGGGCGGGCTCCACTGACGCTCCTGGGAGAATCTCTGCTGACCACACAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382269.7
ENST00000539820.5
ENST00000617910.3
ENST00000629774.2
CDS-3UTR CAA 90 bp GGCAAAGGTTCCTACTCACAGAGTGGGATCTGCAATCCGCAGGCAGGGTCCTTCGGGCAATCACTCCGCTaGTTGGCTCAGGAAGTTTGG +
Preference number: 5 (lower is better)
Translates to: GKGSYSQSGICNPQAGSFGQSLR*LAQEVW
Trigger: CCAAACTTCCTGAGCCAACAAGCGGAGTGATTGCCC...GAAGGACCCTGCCTGCGGATTGCAGATCCCACTCTGTGAGTAGGAACCTTTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422464.5
CDS-3UTR CAA 90 bp GTGTGGTCAGCAGAGATTCTCCCAGGAGCGTCAGTGGAGCCCGCCCAGCAGCTGCTGATAAAGCATCCGTaGGATGCTGTGATTGTTGAG +
Preference number: 5 (lower is better)
Translates to: VWSAEILPGASVEPAQQLLIKHP*DAVIVE
Trigger: CTCAACAATCACAGCATCCAACGGATGCTTTATCAG...CAGCTGCTGGGCGGGCTCCACTGACGCTCCTGGGAGAATCTCTGCTGACCACAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382269.7
ENST00000539820.5
ENST00000617910.3
ENST00000629774.2
CDS-3UTR CAA 90 bp CAGCAGCAGGGCCTTTCAGAAGGGCCGAGCAGGAACTCACTGCTGCCGGCTGAGCTGATAAAGCATCCGTaGGATGCTGTGATTGTTGAG +
Preference number: 5 (lower is better)
Translates to: QQQGLSEGPSRNSLLPAELIKHP*DAVIVE
Trigger: CTCAACAATCACAGCATCCAACGGATGCTTTATCAG...CTCAGCCGGCAGCAGTGAGTTCCTGCTCGGCCCTTCTGAAAGGCCCTGCTGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382269.7
ENST00000539820.5
ENST00000617910.3
ENST00000629774.2
CDS-3UTR CAA 90 bp TTGCCTGTGTTTGGAAAAGAGTCGTACGGTGATTTTGGGAACATGAAGCTGTTCCGTGCCAGGGCCGTGTaGGAGGCGCCCCATCTGGGG +
Preference number: 5 (lower is better)
Translates to: LPVFGKESYGDFGNMKLFRARAV*EAPHLG
Trigger: CCCCAGATGGGGCGCCTCCAACACGGCCCTGGCACG...GAACAGCTTCATGTTCCCAAAATCACCGTACGACTCTTTTCCAAACACAGGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR CAA 90 bp CCTTCCTCTCCTGTGCTTCCAGCCGATCCTCAGATTAAGTGGAAGCAAACGCCTGGCAGTGGGAACCCGTaGTACAAGAAGCCGGGGTTC +
Preference number: 5 (lower is better)
Translates to: PSSPVLPADPQIKWKQTPGSGNP*YKKPGF
Trigger: GAACCCCGGCTTCTTGTACAACGGGTTCCCACTGCC...AGGCGTTTGCTTCCACTTAATCTGAGGATCGGCTGGAAGCACAGGAGAGGAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422464.5
ENST00000625793.2
CDS-3UTR CAA 90 bp CCTCTCCTGTGCTTCCAGCCGATCCTCAGATTAAGTGGAAGCAAACGCCTGAAACCCCCGAAGGCAGCTTaGCTGGTGCTCTGTGGTGTG +
Preference number: 5 (lower is better)
Translates to: PLLCFQPILRLSGSKRLKPPKAA*LVLCGV
Trigger: CACACCACAGAGCACCAGCAAAGCTGCCTTCGGGGG...TTTCAGGCGTTTGCTTCCACTTAATCTGAGGATCGGCTGGAAGCACAGGAGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422464.5
ENST00000625793.2
CDS-3UTR CAA 90 bp AGTAACTACGACATGGTACTAGATTTACCCGTGTTGGGAAAACAGTCGTCCTGCGCGCTCCAGTGCGCATaGAGGGCCTTGAGCGCCGCG +
Preference number: 5 (lower is better)
Translates to: SNYDMVLDLPVLGKQSSCALQCA*RALSAA
Trigger: CGCGGCGCTCAAGGCCCTCAATGCGCACTGGAGCGC...GCAGGACGACTGTTTTCCCAACACGGGTAAATCTAGTACCATGTCGTAGTTACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR CAA 90 bp CTCCTTCCTCTCCTGTGCTTCCAGCCGATCCTCAGATTAAGTGGAAGCAAACGCGCTGTGGAGAACACGTaGGACACAGTGGGGTTGGCG +
Preference number: 5 (lower is better)
Translates to: LLPLLCFQPILRLSGSKRAVENT*DTVGLA
Trigger: CGCCAACCCCACTGTGTCCAACGTGTTCTCCACAGC...GCGTTTGCTTCCACTTAATCTGAGGATCGGCTGGAAGCACAGGAGAGGAAGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422464.5
ENST00000625793.2
CDS-3UTR CAA 90 bp CCTCTCCTGTGCTTCCAGCCGATCCTCAGATTAAGTGGAAGCAAACGCCTGAAACGGCCCCTCTGCAGGTaGATGGACGCCAGATCCAAG +
Preference number: 5 (lower is better)
Translates to: PLLCFQPILRLSGSKRLKRPLCR*MDARSK
Trigger: CTTGGATCTGGCGTCCATCAACCTGCAGAGGGGCCG...TTTCAGGCGTTTGCTTCCACTTAATCTGAGGATCGGCTGGAAGCACAGGAGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422464.5
ENST00000625793.2
CDS-3UTR CAA 90 bp CGACATGGTACTAGATTTACCCGTGTTGGGAAAACAGTCGTCCTGCTGATTTCGGAGCTGCTCCCGGCCTaGGAGCTCATACCCGTGCCG +
Preference number: 5 (lower is better)
Translates to: RHGTRFTRVGKTVVLLISELLPA*ELIPVP
Trigger: CGGCACGGGTATGAGCTCCAAGGCCGGGAGCAGCTC...CGAAATCAGCAGGACGACTGTTTTCCCAACACGGGTAAATCTAGTACCATGTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000469607.3
CDS-3UTR CAA 90 bp AGGACGGCAGCTTTACAGGGTCGCGTGGCTAACGGTGCCCCCGAGACTGCCTTGATGAGACAAGTCACTTaGCCTTGTTGGTCCTTAAGG +
Preference number: 5 (lower is better)
Translates to: RTAALQGRVANGAPETALMRQVT*PCWSLR
Trigger: CCTTAAGGACCAACAAGGCAAAGTGACTTGTCTCAT...CAAGGCAGTCTCGGGGGCACCGTTAGCCACGCGACCCTGTAAAGCTGCCGTCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329066.9
ENST00000422464.5
CDS-3UTR CAA 90 bp TTGTGTGGTCAGCAGAGATTCTCCCAGGAGCGTCAGTGGAGCCCGCCCAGCAGCTCAGTTTCGCATTATTaGGTCTGTCCTGCTGGAAGG +
Preference number: 5 (lower is better)
Translates to: LCGQQRFSQERQWSPPSSSVSHY*VCPAGR
Trigger: CCTTCCAGCAGGACAGACCAAATAATGCGAAACTGA...GCTGCTGGGCGGGCTCCACTGACGCTCCTGGGAGAATCTCTGCTGACCACACAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382269.7
ENST00000539820.5
ENST00000617910.3
ENST00000629774.2
CDS-3UTR CAA 90 bp CCTGGACAGGAGCTCTTTTCACAAAGGACCGCTGGCGAGATGAGCCATCCTTCTGGCCTCCTCCGGGAGTaGTATGGGAAAACATGGGTT +
Preference number: 5 (lower is better)
Translates to: PGQELFSQRTAGEMSHPSGLLRE*YGKTWV
Trigger: AACCCATGTTTTCCCATACAACTCCCGGAGGAGGCC...AGAAGGATGGCTCATCTCGCCAGCGGTCCTTTGTGAAAAGAGCTCCTGTCCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422464.5
CDS-3UTR CAA 90 bp CGACATGGTACTAGATTTACCCGTGTTGGGAAAACAGTCGTCCTGCTGATTTCGATCTGCTGCCGCGGGTaGGCCGTGGACAGGTTCCCA +
Preference number: 5 (lower is better)
Translates to: RHGTRFTRVGKTVVLLISICCRG*AVDRFP
Trigger: TGGGAACCTGTCCACGGCCAACCCGCGGCAGCAGAT...CGAAATCAGCAGGACGACTGTTTTCCCAACACGGGTAAATCTAGTACCATGTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR CAA 90 bp ACTGTTCTGCTCTCTGCTTCTCTCAGTTCAAAAGTCAGACTTACACAAGTGAGTTGCGCATTGAGGGCCTaGAGCGCCGCGGCCAGGCGG +
Preference number: 5 (lower is better)
Translates to: TVLLSASLSSKVRLTQVSCALRA*SAAARR
Trigger: CCGCCTGGCCGCGGCGCTCAAGGCCCTCAATGCGCA...ACTCACTTGTGTAAGTCTGACTTTTGAACTGAGAGAAGCAGAGAGCAGAACAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422464.5
ENST00000625793.2
CDS-3UTR CAA 90 bp GTGTTTGGAAAAGAGTCGTACGGTGATTTTGGGAACATGAAGCTGTTCTGCAGTGCGCTCCAGTGCGCATaGAGGGCCTTGAGCGCCGCG +
Preference number: 5 (lower is better)
Translates to: VFGKESYGDFGNMKLFCSALQCA*RALSAA
Trigger: CGCGGCGCTCAAGGCCCTCAATGCGCACTGGAGCGC...ACTGCAGAACAGCTTCATGTTCCCAAAATCACCGTACGACTCTTTTCCAAACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR CAA 90 bp GATTTGCCTGTGTTTGGAAAAGAGTCGTACGGTGATTTTGGGAACATGAAGCTGGCGCTCCAGTGCGCATaGAGGGCCTTGAGCGCCGCG +
Preference number: 5 (lower is better)
Translates to: DLPVFGKESYGDFGNMKLALQCA*RALSAA
Trigger: CGCGGCGCTCAAGGCCCTCAATGCGCACTGGAGCGC...CAGCTTCATGTTCCCAAAATCACCGTACGACTCTTTTCCAAACACAGGCAAATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR CAA 90 bp GAGAGTAACTACGACATGGTACTAGATTTACCCGTGTTGGGAAAACAGTCGTCCAGAGCGCCCACGACCTaGCGCGCCTCCTGGTACACG +
Preference number: 5 (lower is better)
Translates to: ESNYDMVLDLPVLGKQSSRAPTT*RASWYT
Trigger: CGTGTACCAGGAGGCGCGCAAGGTCGTGGGCGCTCT...GGACGACTGTTTTCCCAACACGGGTAAATCTAGTACCATGTCGTAGTTACTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR CAA 90 bp TCATCCATGCCTGAGAGTAACTACGACATGGTACTAGATTTACCCGTGTTGGGAAGAGCGCCCACGACCTaGCGCGCCTCCTGGTACACG +
Preference number: 5 (lower is better)
Translates to: SSMPESNYDMVLDLPVLGRAPTT*RASWYT
Trigger: CGTGTACCAGGAGGCGCGCAAGGTCGTGGGCGCTCT...TCCCAACACGGGTAAATCTAGTACCATGTCGTAGTTACTCTCAGGCATGGATGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR CAA 90 bp CCTGAGAGTAACTACGACATGGTACTAGATTTACCCGTGTTGGGAAAACAGTCGAGAGCGCCCACGACCTaGCGCGCCTCCTGGTACACG +
Preference number: 5 (lower is better)
Translates to: PESNYDMVLDLPVLGKQSRAPTT*RASWYT
Trigger: CGTGTACCAGGAGGCGCGCAAGGTCGTGGGCGCTCT...CGACTGTTTTCCCAACACGGGTAAATCTAGTACCATGTCGTAGTTACTCTCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR CAA 90 bp CCTTCCTCTCCTGTGCTTCCAGCCGATCCTCAGATTAAGTGGAAGCAAACGCCTTACAAGTCCAGGATCTaGTCGGCCACGCTCCTGCTG +
Preference number: 5 (lower is better)
Translates to: PSSPVLPADPQIKWKQTPYKSRI*SATLLL
Trigger: CAGCAGGAGCGTGGCCGACAAGATCCTGGACTTGTA...AGGCGTTTGCTTCCACTTAATCTGAGGATCGGCTGGAAGCACAGGAGAGGAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422464.5
ENST00000625793.2
CDS-3UTR CAA 90 bp ACGCCTGAAAGTGAGCCCTTAGTTTTGGAACCGGTTTGTACAAATGGAAGGCATGAGCTGCTCCCGGCCTaGGAGCTCATACCCGTGCCG +
Preference number: 5 (lower is better)
Translates to: TPESEPLVLEPVCTNGRHELLPA*ELIPVP
Trigger: CGGCACGGGTATGAGCTCCAAGGCCGGGAGCAGCTC...ATGCCTTCCATTTGTACAAACCGGTTCCAAAACTAAGGGCTCACTTTCAGGCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422464.5
ENST00000625793.2
CDS-3UTR CAA 90 bp TCTTCCCAGGAGAAGAGGGAAGCCAGATGTAGGCCCTGTGGACACCTGGTGATGAGTCACTTTGCCTTGTaGGTCCTTAAGGCTCCAGCC +
Preference number: 5 (lower is better)
Translates to: SSQEKREARCRPCGHLVMSHFAL*VLKAPA
Trigger: GGCTGGAGCCTTAAGGACCAACAAGGCAAAGTGACT...CATCACCAGGTGTCCACAGGGCCTACATCTGGCTTCCCTCTTCTCCTGGGAAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329066.9
ENST00000422464.5
CDS-3UTR CAA 90 bp TTGTGTGGTCAGCAGAGATTCTCCCAGGAGCGTCAGTGGAGCCCGCCCAGCAGCTTCATTTTTCTGTTGTaGCAAGCTCCTGTGATGGGC +
Preference number: 5 (lower is better)
Translates to: LCGQQRFSQERQWSPPSSFIFLL*QAPVMG
Trigger: GCCCATCACAGGAGCTTGCAACAACAGAAAAATGAA...GCTGCTGGGCGGGCTCCACTGACGCTCCTGGGAGAATCTCTGCTGACCACACAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000382269.7
ENST00000539820.5
ENST00000617910.3
ENST00000629774.2
CDS-3UTR CAA 90 bp ATGAGGACGGCAGCTTTACAGGGTCGCGTGGCTAACGGTGCCCCCGAGACTGCCAGTGAGCCCTTAGTTTaGGAACCGGTTTGTACAAAT +
Preference number: 5 (lower is better)
Translates to: MRTAALQGRVANGAPETASEPLV*EPVCTN
Trigger: ATTTGTACAAACCGGTTCCAAAACTAAGGGCTCACT...GGCAGTCTCGGGGGCACCGTTAGCCACGCGACCCTGTAAAGCTGCCGTCCTCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000422464.5
CDS TCA 90 bp TTGGACAGCACAAAGAGCCTTTCCGTCAGCTCCTCGTTCATCAGCTaGTCCTGCACCTGCAGTTTGGCTGGTCTTGCAAGAAGGCCTCGT +
Preference number: 5 (lower is better)
Translates to: LDSTKSLSVSSSFIS*SCTCSLAGLARRPR
Trigger: ACGAGGCCTTCTTGCAAGACCAGCCAAACTGCAGGTGCAGGATCAGCTGATGAACGAGGAGCTGACGGAAAGGCTCTTTGTGCTGTCCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382198.5
ENST00000422464.5
ENST00000613631.2
ENST00000622050.4
ENST00000625313.2
ENST00000625793.2
ENST00000627010.2
CDS GCA 90 bp AAGTTTTCAGCTAAGCCTCCCAGCCAGACATCGATGTTGTCAGGATaGTTGTACAAGTCCAGGATCTTGTCGGCCACGCTCCTGCTGGCG +
Preference number: 5 (lower is better)
Translates to: KFSAKPPSQTSMLSG*LYKSRILSATLLLA
Trigger: CGCCAGCAGGAGCGTGGCCGACAAGATCCTGGACTTGTACAAGCATCCTGACAACATCGATGTCTGGCTGGGAGGCTTAGCTGAAAACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 20 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382198.5
ENST00000382201.7
ENST00000422464.5
ENST00000446278.5
ENST00000462973.5
ENST00000469607.3
ENST00000497517.6
ENST00000613631.2
ENST00000622050.4
ENST00000625313.2
ENST00000625793.2
ENST00000626753.2
ENST00000626995.2
ENST00000627010.2
ENST00000627917.2
ENST00000630089.2
ENST00000630235.2
CDS CCA 90 bp GTGATGCTGTCACAAGACTCAAAGTCTTCGGGGAATTTGCCGACTTaGAAGGCATCCATGGGCACCCTGGTGAGGCCAGTGTTGTCACAG +
Preference number: 5 (lower is better)
Translates to: VMLSQDSKSSGNLPT*KASMGTLVRPVLSQ
Trigger: CTGTGACAACACTGGCCTCACCAGGGTGCCCATGGATGCCTTCCAAGTCGGCAAATTCCCCGAAGACTTTGAGTCTTGTGACAGCATCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382198.5
ENST00000382201.7
ENST00000422464.5
ENST00000446278.5
ENST00000469607.3
ENST00000613631.2
ENST00000622050.4
ENST00000625313.2
ENST00000625793.2
ENST00000626753.2
ENST00000626995.2
ENST00000627010.2
ENST00000627917.2
CDS-3UTR CAA 90 bp CTCCTTCCTCTCCTGTGCTTCCAGCCGATCCTCAGATTAAGTGGAAGCAAACGCGGGCAATCACTCCGCTaGTTGGCTCAGGAAGTTTGG +
Preference number: 5 (lower is better)
Translates to: LLPLLCFQPILRLSGSKRGQSLR*LAQEVW
Trigger: CCAAACTTCCTGAGCCAACAAGCGGAGTGATTGCCC...GCGTTTGCTTCCACTTAATCTGAGGATCGGCTGGAAGCACAGGAGAGGAAGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422464.5
ENST00000625793.2
CDS-3UTR CAA 90 bp CCTCTCCTGTGCTTCCAGCCGATCCTCAGATTAAGTGGAAGCAAACGCCTGAAAGGGTGGTCTCTGTTGTaGCAAGCTCCTGTGATGGGC +
Preference number: 5 (lower is better)
Translates to: PLLCFQPILRLSGSKRLKGWSLL*QAPVMG
Trigger: GCCCATCACAGGAGCTTGCAACAACAGAGACCACCC...TTTCAGGCGTTTGCTTCCACTTAATCTGAGGATCGGCTGGAAGCACAGGAGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422464.5
ENST00000625793.2
CDS-3UTR CAA 90 bp AGGCCAGACAAATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACCGTGCCAGGGCCGTGTaGGAGGCGCCCCATCTGGGG +
Preference number: 5 (lower is better)
Translates to: RPDKCSYNIYSSMPESNYRARAV*EAPHLG
Trigger: CCCCAGATGGGGCGCCTCCAACACGGCCCTGGCACG...GTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATTTGTCTGGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR CAA 90 bp TCATCCATGCCTGAGAGTAACTACGACATGGTACTAGATTTACCCGTGTTGGGAATCTGCTGCCGCGGGTaGGCCGTGGACAGGTTCCCA +
Preference number: 5 (lower is better)
Translates to: SSMPESNYDMVLDLPVLGICCRG*AVDRFP
Trigger: TGGGAACCTGTCCACGGCCAACCCGCGGCAGCAGAT...TCCCAACACGGGTAAATCTAGTACCATGTCGTAGTTACTCTCAGGCATGGATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR CAA 90 bp ACTAGATTTACCCGTGTTGGGAAAACAGTCGTCCTGCTGATTTCGGATTTGCCTATCTGCTGCCGCGGGTaGGCCGTGGACAGGTTCCCA +
Preference number: 5 (lower is better)
Translates to: TRFTRVGKTVVLLISDLPICCRG*AVDRFP
Trigger: TGGGAACCTGTCCACGGCCAACCCGCGGCAGCAGAT...AGGCAAATCCGAAATCAGCAGGACGACTGTTTTCCCAACACGGGTAAATCTAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR CAA 90 bp AAAGCCCCAGAAGGAACAAATCAGGCAATGTTTACAAGAAAAGGCCAGACAAATTGCGCATTGAGGGCCTaGAGCGCCGCGGCCAGGCGG +
Preference number: 5 (lower is better)
Translates to: KAPEGTNQAMFTRKGQTNCALRA*SAAARR
Trigger: CCGCCTGGCCGCGGCGCTCAAGGCCCTCAATGCGCA...ATTTGTCTGGCCTTTTCTTGTAAACATTGCCTGATTTGTTCCTTCTGGGGCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR CAA 90 bp TTGCCTGTGTTTGGAAAAGAGTCGTACGGTGATTTTGGGAACATGAAGCTGTTCAGAGCGCCCACGACCTaGCGCGCCTCCTGGTACACG +
Preference number: 5 (lower is better)
Translates to: LPVFGKESYGDFGNMKLFRAPTT*RASWYT
Trigger: CGTGTACCAGGAGGCGCGCAAGGTCGTGGGCGCTCT...GAACAGCTTCATGTTCCCAAAATCACCGTACGACTCTTTTCCAAACACAGGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR CAA 90 bp GTGCTTCCAGCCGATCCTCAGATTAAGTGGAAGCAAACGCCTGAAAGTGAGCCCTCCTGCACCTGCAGTTaGGCTGGTCTTGCAAGAAGG +
Preference number: 5 (lower is better)
Translates to: VLPADPQIKWKQTPESEPSCTCS*AGLARR
Trigger: CCTTCTTGCAAGACCAGCCAAACTGCAGGTGCAGGA...GGGCTCACTTTCAGGCGTTTGCTTCCACTTAATCTGAGGATCGGCTGGAAGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422464.5
ENST00000625793.2
CDS-3UTR CAA 90 bp AAAGAGTCGTACGGTGATTTTGGGAACATGAAGCTGTTCTGCAGTGTCCTGCCACGGCCCCTCTGCAGGTaGATGGACGCCAGATCCAAG +
Preference number: 5 (lower is better)
Translates to: KESYGDFGNMKLFCSVLPRPLCR*MDARSK
Trigger: CTTGGATCTGGCGTCCATCAACCTGCAGAGGGGCCG...TGGCAGGACACTGCAGAACAGCTTCATGTTCCCAAAATCACCGTACGACTCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000422464.5
CDS-3UTR CAA 90 bp GCGTGGGAGCCAGGTGCAAAGACGAATGTGCTCTCAGCAGAACGACCCTGGGCTATGTTGTCAGGATGCTaGTACAAGTCCAGGATCTTG +
Preference number: 5 (lower is better)
Translates to: AWEPGAKTNVLSAERPWAMLSGC*YKSRIL
Trigger: CAAGATCCTGGACTTGTACAAGCATCCTGACAACAT...AGCCCAGGGTCGTTCTGCTGAGAGCACATTCGTCTTTGCACCTGGCTCCCACGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422464.5
CDS-3UTR CAA 90 bp TTTGGAAAAGAGTCGTACGGTGATTTTGGGAACATGAAGCTGTTCTGCAGTGTCGAGCTGCTCCCGGCCTaGGAGCTCATACCCGTGCCG +
Preference number: 5 (lower is better)
Translates to: FGKESYGDFGNMKLFCSVELLPA*ELIPVP
Trigger: CGGCACGGGTATGAGCTCCAAGGCCGGGAGCAGCTC...GACACTGCAGAACAGCTTCATGTTCCCAAAATCACCGTACGACTCTTTTCCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000469607.3
CDS-3UTR CAA 90 bp GATTTGCCTGTGTTTGGAAAAGAGTCGTACGGTGATTTTGGGAACATGAAGCTGGAGCTGCTCCCGGCCTaGGAGCTCATACCCGTGCCG +
Preference number: 5 (lower is better)
Translates to: DLPVFGKESYGDFGNMKLELLPA*ELIPVP
Trigger: CGGCACGGGTATGAGCTCCAAGGCCGGGAGCAGCTC...CAGCTTCATGTTCCCAAAATCACCGTACGACTCTTTTCCAAACACAGGCAAATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000469607.3
CDS-3UTR CAA 90 bp TTGTGTGGTCAGCAGAGATTCTCCCAGGAGCGTCAGTGGAGCCCGCCCAGCAGCGCCCTGGTCTTGAGGTaGTTAAAATGTAAACTTAGG +
Preference number: 5 (lower is better)
Translates to: LCGQQRFSQERQWSPPSSALVLR*LKCKLR
Trigger: CCTAAGTTTACATTTTAACAACCTCAAGACCAGGGC...GCTGCTGGGCGGGCTCCACTGACGCTCCTGGGAGAATCTCTGCTGACCACACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382269.7
ENST00000539820.5
ENST00000617910.3
ENST00000629774.2
CDS-3UTR CAA 90 bp GTGTGGTCAGCAGAGATTCTCCCAGGAGCGTCAGTGGAGCCCGCCCAGCAGCTGACAATGTGTGAAGCCTaGAACGTAGGAGATTTTAGA +
Preference number: 5 (lower is better)
Translates to: VWSAEILPGASVEPAQQLTMCEA*NVGDFR
Trigger: TCTAAAATCTCCTACGTTCAAGGCTTCACACATTGT...CAGCTGCTGGGCGGGCTCCACTGACGCTCCTGGGAGAATCTCTGCTGACCACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382269.7
ENST00000539820.5
ENST00000617910.3
ENST00000629774.2
CDS-3UTR CAA 90 bp GGGAAGTTTCTGGCTTCCGGACAAATGCTTGTTTGCAGGAGGCCACAGAGGATCAGACTGGAGGATCTCTaGGGCCTAAGGGCTCAACAC +
Preference number: 5 (lower is better)
Translates to: GKFLASGQMLVCRRPQRIRLEDL*GLRAQH
Trigger: GTGTTGAGCCCTTAGGCCCAAGAGATCCTCCAGTCT...GATCCTCTGTGGCCTCCTGCAAACAAGCATTTGTCCGGAAGCCAGAAACTTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422464.5
CDS GCA 90 bp GCTCTGTGGTGTGAACGCGATGTCGTGGTCGATGTATTGTCCCCATaGCATCAGGAGGTCAGAATAGCGGTCATCATCTGTGACAACCTC +
Preference number: 5 (lower is better)
Translates to: ALWCERDVVVDVLSP*HQEVRIAVIICDNL
Trigger: GAGGTTGTCACAGATGATGACCGCTATTCTGACCTCCTGATGGCATGGGGACAATACATCGACCACGACATCGCGTTCACACCACAGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382198.5
ENST00000382201.7
ENST00000422464.5
ENST00000613631.2
ENST00000622050.4
ENST00000625313.2
ENST00000625793.2
ENST00000627010.2
ENST00000627917.2
CDS-3UTR CAA 90 bp TCCAGGCCAGGTCCTTTTGGTTCCATGCGTGGGAGCCAGGTGCAAAGACGAATGCAATCACTCCGCTTGTaGGCTCAGGAAGTTTGGAAA +
Preference number: 5 (lower is better)
Translates to: SRPGPFGSMRGSQVQRRMQSLRL*AQEVWK
Trigger: TTTCCAAACTTCCTGAGCCAACAAGCGGAGTGATTG...CATTCGTCTTTGCACCTGGCTCCCACGCATGGAACCAAAAGGACCTGGCCTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422464.5
CDS-3UTR CAA 90 bp CCAGTGCCAATGTCATTGTGTGGTCAGCAGAGATTCTCCCAGGAGCGTCAGTGGGTGATGGGCCTGTATTaGTTCGCCAGGCAAGTGTTT +
Preference number: 5 (lower is better)
Translates to: PVPMSLCGQQRFSQERQWVMGLY*FARQVF
Trigger: AAACACTTGCCTGGCGAACAAATACAGGCCCATCAC...CCACTGACGCTCCTGGGAGAATCTCTGCTGACCACACAATGACATTGGCACTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382269.7
ENST00000539820.5
ENST00000617910.3
ENST00000629774.2
CDS-3UTR CAA 90 bp GACAAATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACATGCGTGCCAGGGCCGTGTaGGAGGCGCCCCATCTGGGG +
Preference number: 5 (lower is better)
Translates to: DKCSYNIYSSMPESNYDMRARAV*EAPHLG
Trigger: CCCCAGATGGGGCGCCTCCAACACGGCCCTGGCACG...CATGTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATTTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR CAA 90 bp GAGGCTCATGTGTTGGTGAATCTCTGGAGGATGAGACAAGTCACTTTGCCTTGTGGCAGTGGGAACCCGTaGTACAAGAAGCCGGGGTTC +
Preference number: 5 (lower is better)
Translates to: EAHVLVNLWRMRQVTLPCGSGNP*YKKPGF
Trigger: GAACCCCGGCTTCTTGTACAACGGGTTCCCACTGCC...ACAAGGCAAAGTGACTTGTCTCATCCTCCAGAGATTCACCAACACATGAGCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329066.9
ENST00000422464.5
CDS-3UTR CAA 90 bp CCTCTCCTGTGCTTCCAGCCGATCCTCAGATTAAGTGGAAGCAAACGCCTGAAAGTCGTGGTCGATGTATaGTCCCCATGCCATCAGGAG +
Preference number: 5 (lower is better)
Translates to: PLLCFQPILRLSGSKRLKVVVDV*SPCHQE
Trigger: CTCCTGATGGCATGGGGACAATACATCGACCACGAC...TTTCAGGCGTTTGCTTCCACTTAATCTGAGGATCGGCTGGAAGCACAGGAGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422464.5
ENST00000625793.2
CDS-3UTR CAA 90 bp CCTGTGCTTCCAGCCGATCCTCAGATTAAGTGGAAGCAAACGCCTGAAAGTGAGGTCGTGGTCGATGTATaGTCCCCATGCCATCAGGAG +
Preference number: 5 (lower is better)
Translates to: PVLPADPQIKWKQTPESEVVVDV*SPCHQE
Trigger: CTCCTGATGGCATGGGGACAATACATCGACCACGAC...CTCACTTTCAGGCGTTTGCTTCCACTTAATCTGAGGATCGGCTGGAAGCACAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422464.5
ENST00000625793.2
CDS-3UTR CAA 90 bp TCATCCATGCCTGAGAGTAACTACGACATGGTACTAGATTTACCCGTGTTGGGACCCCCGAAGGCAGCTTaGCTGGTGCTCTGTGGTGTG +
Preference number: 5 (lower is better)
Translates to: SSMPESNYDMVLDLPVLGPPKAA*LVLCGV
Trigger: CACACCACAGAGCACCAGCAAAGCTGCCTTCGGGGG...TCCCAACACGGGTAAATCTAGTACCATGTCGTAGTTACTCTCAGGCATGGATGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR CAA 90 bp GGTACTAGATTTACCCGTGTTGGGAAAACAGTCGTCCTGCTGATTTCGGATTTGCCCCCGAAGGCAGCTTaGCTGGTGCTCTGTGGTGTG +
Preference number: 5 (lower is better)
Translates to: GTRFTRVGKTVVLLISDLPPKAA*LVLCGV
Trigger: CACACCACAGAGCACCAGCAAAGCTGCCTTCGGGGG...CAAATCCGAAATCAGCAGGACGACTGTTTTCCCAACACGGGTAAATCTAGTACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR CAA 90 bp CTGTGCTTCCAGCCGATCCTCAGATTAAGTGGAAGCAAACGCCTGAAAGTGAGCGGCCTCCTCCGGGAGTaGTATGGGAAAACATGGGTT +
Preference number: 5 (lower is better)
Translates to: LCFQPILRLSGSKRLKVSGLLRE*YGKTWV
Trigger: AACCCATGTTTTCCCATACAACTCCCGGAGGAGGCC...GCTCACTTTCAGGCGTTTGCTTCCACTTAATCTGAGGATCGGCTGGAAGCACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422464.5
ENST00000625793.2
CDS-3UTR CAA 90 bp AATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACATGGTACTGCGCATTGAGGGCCTaGAGCGCCGCGGCCAGGCGG +
Preference number: 5 (lower is better)
Translates to: NAAITFIHPCLRVTTTWYCALRA*SAAARR
Trigger: CCGCCTGGCCGCGGCGCTCAAGGCCCTCAATGCGCA...GTACCATGTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR CAA 90 bp CGACATGGTACTAGATTTACCCGTGTTGGGAAAACAGTCGTCCTGCTGATTTCGGCTGTGGAGAACACGTaGGACACAGTGGGGTTGGCG +
Preference number: 5 (lower is better)
Translates to: RHGTRFTRVGKTVVLLISAVENT*DTVGLA
Trigger: CGCCAACCCCACTGTGTCCAACGTGTTCTCCACAGC...CGAAATCAGCAGGACGACTGTTTTCCCAACACGGGTAAATCTAGTACCATGTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000469607.3
CDS-3UTR CAA 90 bp TCATCCATGCCTGAGAGTAACTACGACATGGTACTAGATTTACCCGTGTTGGGACGGCCCCTCTGCAGGTaGATGGACGCCAGATCCAAG +
Preference number: 5 (lower is better)
Translates to: SSMPESNYDMVLDLPVLGRPLCR*MDARSK
Trigger: CTTGGATCTGGCGTCCATCAACCTGCAGAGGGGCCG...TCCCAACACGGGTAAATCTAGTACCATGTCGTAGTTACTCTCAGGCATGGATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000422464.5
CDS-3UTR CAA 90 bp CTGAAGCAAAATGTTCATAGCCCTCCTGTGCCACTGTTGTCATTCGTGGGTGAGCTGGTGAGGCCAGTGTaGTCACAGATGACCCGAGAC +
Preference number: 5 (lower is better)
Translates to: LKQNVHSPPVPLLSFVGELVRPV*SQMTRD
Trigger: GTCTCGGGTCATCTGTGACAACACTGGCCTCACCAG...CTCACCCACGAATGACAACAGTGGCACAGGAGGGCTATGAACATTTTGCTTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329066.9
ENST00000422464.5
CDS-3UTR CAA 90 bp CTCCTTCCTCTCCTGTGCTTCCAGCCGATCCTCAGATTAAGTGGAAGCAAACGCAAGTCTTCGGGGAATTaGCCGACTTGGAAGGCATCC +
Preference number: 5 (lower is better)
Translates to: LLPLLCFQPILRLSGSKRKSSGN*PTWKAS
Trigger: GGATGCCTTCCAAGTCGGCAAATTCCCCGAAGACTT...GCGTTTGCTTCCACTTAATCTGAGGATCGGCTGGAAGCACAGGAGAGGAAGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422464.5
ENST00000625793.2
CDS-3UTR CAA 90 bp CTCCTTCCTCTCCTGTGCTTCCAGCCGATCCTCAGATTAAGTGGAAGCAAACGCGCCACACTTGTCGTCTaGAGGAAAGGTTTCCCTCCA +
Preference number: 5 (lower is better)
Translates to: LLPLLCFQPILRLSGSKRATLVV*RKGFPP
Trigger: TGGAGGGAAACCTTTCCTCAAGACGACAAGTGTGGC...GCGTTTGCTTCCACTTAATCTGAGGATCGGCTGGAAGCACAGGAGAGGAAGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422464.5
ENST00000625793.2
CDS-3UTR CAA 90 bp TTGGTGAATCTCTGGAGGATGAGACAAGTCACTTTGCCTTGTTGGTCCTTAAGGGCCCCCGAGACTGCCTaGTTGAGTCAGGGAGGGAGT +
Preference number: 5 (lower is better)
Translates to: LVNLWRMRQVTLPCWSLRAPETA*LSQGGS
Trigger: ACTCCCTCCCTGACTCAACAAGGCAGTCTCGGGGGC...CCTTAAGGACCAACAAGGCAAAGTGACTTGTCTCATCCTCCAGAGATTCACCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329066.9
ENST00000422464.5
CDS-3UTR CAA 90 bp CTGAAGCAAAATGTTCATAGCCCTCCTGTGCCACTGTTGTCATTCGTGGGTGAGCTCCTAACTATTGCCTaGCGTGAGGCTGAGGGCTGC +
Preference number: 5 (lower is better)
Translates to: LKQNVHSPPVPLLSFVGELLTIA*REAEGC
Trigger: GCAGCCCTCAGCCTCACGCAAGGCAATAGTTAGGAG...CTCACCCACGAATGACAACAGTGGCACAGGAGGGCTATGAACATTTTGCTTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329066.9
ENST00000422464.5
CDS-3UTR CAA 90 bp CAGCAGCAGGGCCTTTCAGAAGGGCCGAGCAGGAACTCACTGCTGCCGGCTGAGTATTTCATTTTTCTGTaGTTGCAAGCTCCTGTGATG +
Preference number: 5 (lower is better)
Translates to: QQQGLSEGPSRNSLLPAEYFIFL*LQAPVM
Trigger: CATCACAGGAGCTTGCAACAACAGAAAAATGAAATA...CTCAGCCGGCAGCAGTGAGTTCCTGCTCGGCCCTTCTGAAAGGCCCTGCTGCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000382269.7
ENST00000539820.5
ENST00000617910.3
ENST00000629774.2
CDS-3UTR CAA 90 bp AATTTTGAAACATGCGATCATTATGAGGAAGCGTGCGCCCCATGCCGTGCAGCAGCTGAGGCAAGAGGATaGCTTGAGCAGGAGGGTCGA +
Preference number: 5 (lower is better)
Translates to: NFETCDHYEEACAPCRAAAEARG*LEQEGR
Trigger: TCGACCCTCCTGCTCAAGCAATCCTCTTGCCTCAGC...TGCTGCACGGCATGGGGCGCACGCTTCCTCATAATGATCGCATGTTTCAAAATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422464.5
CDS CCA 90 bp GCAAGCTCCTGTGATGGGCCTGTATTTGTTCGCCAGGCAAGTGTTTaGGCATTTTGGGGGCAGCATGTAAGGGAGACATCCAGACATGTT +
Preference number: 5 (lower is better)
Translates to: ASSCDGPVFVRQASV*AFWGQHVRETSRHV
Trigger: AACATGTCTGGATGTCTCCCTTACATGCTGCCCCCAAAATGCCCAAACACTTGCCTGGCGAACAAATACAGGCCCATCACAGGAGCTTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 18 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382198.5
ENST00000382201.7
ENST00000382269.7
ENST00000422464.5
ENST00000423320.5
ENST00000539820.5
ENST00000613631.2
ENST00000617910.3
ENST00000622050.4
ENST00000625313.2
ENST00000625793.2
ENST00000627010.2
ENST00000627917.2
ENST00000628844.2
ENST00000629774.2
CDS-3UTR CAA 90 bp GTGTCTGAGTTTGCTTTCAATGCCGAAGGACTCCTAACTATTGCCTTGCGTGAGGTGTCCACCAGGCGCTaGCTTTCCTCCAAGACGCTA +
Preference number: 5 (lower is better)
Translates to: VSEFAFNAEGLLTIALREVSTRR*LSSKTL
Trigger: TAGCGTCTTGGAGGAAAGCAAGCGCCTGGTGGACAC...CTCACGCAAGGCAATAGTTAGGAGTCCTTCGGCATTGAAAGCAAACTCAGACAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329066.9
CDS-3UTR CAA 90 bp CAGGACCCAGGGGCAGGCTTTGCAGGTGGATGTAGACGTCATTGGAGAAAAGCTCAATCACTCCGCTTGTaGGCTCAGGAAGTTTGGAAA +
Preference number: 5 (lower is better)
Translates to: QDPGAGFAGGCRRHWRKAQSLRL*AQEVWK
Trigger: TTTCCAAACTTCCTGAGCCAACAAGCGGAGTGATTG...AGCTTTTCTCCAATGACGTCTACATCCACCTGCAAAGCCTGCCCCTGGGTCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382269.7
ENST00000539820.5
ENST00000617910.3
ENST00000629774.2
CDS-3UTR CAA 90 bp CTGAAGCAAAATGTTCATAGCCCTCCTGTGCCACTGTTGTCATTCGTGGGTGAGGGGCAATCACTCCGCTaGTTGGCTCAGGAAGTTTGG +
Preference number: 5 (lower is better)
Translates to: LKQNVHSPPVPLLSFVGEGQSLR*LAQEVW
Trigger: CCAAACTTCCTGAGCCAACAAGCGGAGTGATTGCCC...CTCACCCACGAATGACAACAGTGGCACAGGAGGGCTATGAACATTTTGCTTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329066.9
ENST00000422464.5
CDS-3UTR CAA 90 bp GAATCAGGAAGCATCAAACCAAAGAAAGGTTCAGGCTCTACTGCAGGACCCAGGGGGCAATCACTCCGCTaGTTGGCTCAGGAAGTTTGG +
Preference number: 5 (lower is better)
Translates to: ESGSIKPKKGSGSTAGPRGQSLR*LAQEVW
Trigger: CCAAACTTCCTGAGCCAACAAGCGGAGTGATTGCCC...CCTGGGTCCTGCAGTAGAGCCTGAACCTTTCTTTGGTTTGATGCTTCCTGATTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000382269.7
ENST00000539820.5
ENST00000617910.3
ENST00000629774.2
CDS-3UTR CAA 90 bp AGCAGGAACTCACTGCTGCCGGCTGAGGCCCTGGTCTTGAGGTTGTTAAAATGTGTGATGGGCCTGTATTaGTTCGCCAGGCAAGTGTTT +
Preference number: 5 (lower is better)
Translates to: SRNSLLPAEALVLRLLKCVMGLY*FARQVF
Trigger: AAACACTTGCCTGGCGAACAAATACAGGCCCATCAC...ACATTTTAACAACCTCAAGACCAGGGCCTCAGCCGGCAGCAGTGAGTTCCTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382269.7
ENST00000539820.5
ENST00000617910.3
ENST00000629774.2
CDS-3UTR CAA 90 bp GAGGCTCATGTGTTGGTGAATCTCTGGAGGATGAGACAAGTCACTTTGCCTTGTGGGTGGTCTCTGTTGTaGCAAGCTCCTGTGATGGGC +
Preference number: 5 (lower is better)
Translates to: EAHVLVNLWRMRQVTLPCGWSLL*QAPVMG
Trigger: GCCCATCACAGGAGCTTGCAACAACAGAGACCACCC...ACAAGGCAAAGTGACTTGTCTCATCCTCCAGAGATTCACCAACACATGAGCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329066.9
ENST00000422464.5
CDS-3UTR CAA 90 bp CTACGACATGGTACTAGATTTACCCGTGTTGGGAAAACAGTCGTCCTGCTGATTGGCAGTGGGAACCCGTaGTACAAGAAGCCGGGGTTC +
Preference number: 5 (lower is better)
Translates to: LRHGTRFTRVGKTVVLLIGSGNP*YKKPGF
Trigger: GAACCCCGGCTTCTTGTACAACGGGTTCCCACTGCC...AATCAGCAGGACGACTGTTTTCCCAACACGGGTAAATCTAGTACCATGTCGTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR CAA 90 bp GACAAATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACATGGCGCTCCAGTGCGCATaGAGGGCCTTGAGCGCCGCG +
Preference number: 5 (lower is better)
Translates to: DKCSYNIYSSMPESNYDMALQCA*RALSAA
Trigger: CGCGGCGCTCAAGGCCCTCAATGCGCACTGGAGCGC...CATGTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATTTGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR CAA 90 bp CGACATGGTACTAGATTTACCCGTGTTGGGAAAACAGTCGTCCTGCTGATTTCGTACAAGTCCAGGATCTaGTCGGCCACGCTCCTGCTG +
Preference number: 5 (lower is better)
Translates to: RHGTRFTRVGKTVVLLISYKSRI*SATLLL
Trigger: CAGCAGGAGCGTGGCCGACAAGATCCTGGACTTGTA...CGAAATCAGCAGGACGACTGTTTTCCCAACACGGGTAAATCTAGTACCATGTCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000469607.3
CDS-3UTR CAA 90 bp AAAGAGTCGTACGGTGATTTTGGGAACATGAAGCTGTTCTGCAGTGTCCTGCCACTGGTGAGGCCAGTGTaGTCACAGATGACCCGAGAC +
Preference number: 5 (lower is better)
Translates to: KESYGDFGNMKLFCSVLPLVRPV*SQMTRD
Trigger: GTCTCGGGTCATCTGTGACAACACTGGCCTCACCAG...TGGCAGGACACTGCAGAACAGCTTCATGTTCCCAAAATCACCGTACGACTCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000469607.3
CDS-3UTR CAA 90 bp AAAGAGTCGTACGGTGATTTTGGGAACATGAAGCTGTTCTGCAGTGTCCTGCCAGGGGAATTTGCCGACTaGGAAGGCATCCATGGGCAC +
Preference number: 5 (lower is better)
Translates to: KESYGDFGNMKLFCSVLPGEFAD*EGIHGH
Trigger: GTGCCCATGGATGCCTTCCAAGTCGGCAAATTCCCC...TGGCAGGACACTGCAGAACAGCTTCATGTTCCCAAAATCACCGTACGACTCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000469607.3
CDS-3UTR CAA 90 bp TCCAGGCCAGGTCCTTTTGGTTCCATGCGTGGGAGCCAGGTGCAAAGACGAATGCTGCTGATTTCGGATTaGCCTGTGTTTGGAAAAGAG +
Preference number: 5 (lower is better)
Translates to: SRPGPFGSMRGSQVQRRMLLISD*PVFGKE
Trigger: CTCTTTTCCAAACACAGGCAAATCCGAAATCAGCAG...CATTCGTCTTTGCACCTGGCTCCCACGCATGGAACCAAAAGGACCTGGCCTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422464.5
CDS-3UTR CAA 90 bp TGGAGAAAAGCTTTGACTGGCTTCAGTTTCGCATTATTTGGTCTGTCCTGCTGGACCCAGGGGCAGGCTTaGCAGGTGGATGTAGACGTC +
Preference number: 5 (lower is better)
Translates to: WRKALTGFSFALFGLSCWTQGQA*QVDVDV
Trigger: GACGTCTACATCCACCTGCAAAGCCTGCCCCTGGGT...CCAGCAGGACAGACCAAATAATGCGAAACTGAAGCCAGTCAAAGCTTTTCTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382269.7
ENST00000539820.5
ENST00000617910.3
ENST00000629774.2
CDS-3UTR CAA 90 bp GTGCTTCCAGCCGATCCTCAGATTAAGTGGAAGCAAACGCCTGAAAGTGAGCCCTTGATATGGCCTCCCTaGGGGTTCTGCATACAAGGT +
Preference number: 5 (lower is better)
Translates to: VLPADPQIKWKQTPESEPLIWPP*GFCIQG
Trigger: ACCTTGTATGCAGAACCCCAAGGGAGGCCATATCAA...GGGCTCACTTTCAGGCGTTTGCTTCCACTTAATCTGAGGATCGGCTGGAAGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422464.5
ENST00000625793.2
CDS TCA 90 bp CATCAGGAGGTCAGAATAGCGGTCATCATCTGTGACAACCTCATTTaGAACTTGAATGACATGTCTTGTCACCTCCCGGACCGGGGGCAG +
Preference number: 5 (lower is better)
Translates to: HQEVRIAVIICDNLI*NLNDMSCHLPDRGQ
Trigger: CTGCCCCCGGTCCGGGAGGTGACAAGACATGTCATTCAAGTTTCAAATGAGGTTGTCACAGATGATGACCGCTATTCTGACCTCCTGATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382198.5
ENST00000382201.7
ENST00000422464.5
ENST00000613631.2
ENST00000622050.4
ENST00000625313.2
ENST00000625793.2
ENST00000627010.2
ENST00000627917.2
CDS-3UTR CAA 90 bp CCTGTGTTTGGAAAAGAGTCGTACGGTGATTTTGGGAACATGAAGCTGTTCTGCGTGTCCACCAGGCGCTaGCTTTCCTCCAAGACGCTA +
Preference number: 5 (lower is better)
Translates to: PVFGKESYGDFGNMKLFCVSTRR*LSSKTL
Trigger: TAGCGTCTTGGAGGAAAGCAAGCGCCTGGTGGACAC...GCAGAACAGCTTCATGTTCCCAAAATCACCGTACGACTCTTTTCCAAACACAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
CDS-3UTR CAA 90 bp AGCAGGAACTCACTGCTGCCGGCTGAGGCCCTGGTCTTGAGGTTGTTAAAATGTCAATCACTCCGCTTGTaGGCTCAGGAAGTTTGGAAA +
Preference number: 5 (lower is better)
Translates to: SRNSLLPAEALVLRLLKCQSLRL*AQEVWK
Trigger: TTTCCAAACTTCCTGAGCCAACAAGCGGAGTGATTG...ACATTTTAACAACCTCAAGACCAGGGCCTCAGCCGGCAGCAGTGAGTTCCTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382269.7
ENST00000539820.5
ENST00000617910.3
ENST00000629774.2
CDS-3UTR CAA 90 bp CTCCTTCCTCTCCTGTGCTTCCAGCCGATCCTCAGATTAAGTGGAAGCAAACGCCAATCACTCCGCTTGTaGGCTCAGGAAGTTTGGAAA +
Preference number: 5 (lower is better)
Translates to: LLPLLCFQPILRLSGSKRQSLRL*AQEVWK
Trigger: TTTCCAAACTTCCTGAGCCAACAAGCGGAGTGATTG...GCGTTTGCTTCCACTTAATCTGAGGATCGGCTGGAAGCACAGGAGAGGAAGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422464.5
ENST00000625793.2
CDS-3UTR CAA 90 bp GAGAGTAACTACGACATGGTACTAGATTTACCCGTGTTGGGAAAACAGTCGTCCGGGTGGTCTCTGTTGTaGCAAGCTCCTGTGATGGGC +
Preference number: 5 (lower is better)
Translates to: ESNYDMVLDLPVLGKQSSGWSLL*QAPVMG
Trigger: GCCCATCACAGGAGCTTGCAACAACAGAGACCACCC...GGACGACTGTTTTCCCAACACGGGTAAATCTAGTACCATGTCGTAGTTACTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR CAA 90 bp GAATCTCTGGAGGATGAGACAAGTCACTTTGCCTTGTTGGTCCTTAAGGCTCCACTGGGGTGGTCTCTGTaGTTGCAAGCTCCTGTGATG +
Preference number: 5 (lower is better)
Translates to: ESLEDETSHFALLVLKAPLGWSL*LQAPVM
Trigger: CATCACAGGAGCTTGCAACAACAGAGACCACCCCAG...TGGAGCCTTAAGGACCAACAAGGCAAAGTGACTTGTCTCATCCTCCAGAGATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329066.9
ENST00000422464.5
CDS-3UTR CAA 90 bp AAAGAGTCGTACGGTGATTTTGGGAACATGAAGCTGTTCTGCAGTGTCCTGCCAGTCGTGGTCGATGTATaGTCCCCATGCCATCAGGAG +
Preference number: 5 (lower is better)
Translates to: KESYGDFGNMKLFCSVLPVVVDV*SPCHQE
Trigger: CTCCTGATGGCATGGGGACAATACATCGACCACGAC...TGGCAGGACACTGCAGAACAGCTTCATGTTCCCAAAATCACCGTACGACTCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR CAA 90 bp CGACATGGTACTAGATTTACCCGTGTTGGGAAAACAGTCGTCCTGCTGATTTCGGTCGTGGTCGATGTATaGTCCCCATGCCATCAGGAG +
Preference number: 5 (lower is better)
Translates to: RHGTRFTRVGKTVVLLISVVVDV*SPCHQE
Trigger: CTCCTGATGGCATGGGGACAATACATCGACCACGAC...CGAAATCAGCAGGACGACTGTTTTCCCAACACGGGTAAATCTAGTACCATGTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR CAA 90 bp CGACATGGTACTAGATTTACCCGTGTTGGGAAAACAGTCGTCCTGCTGATTTCGGGCCTCCTCCGGGAGTaGTATGGGAAAACATGGGTT +
Preference number: 5 (lower is better)
Translates to: RHGTRFTRVGKTVVLLISGLLRE*YGKTWV
Trigger: AACCCATGTTTTCCCATACAACTCCCGGAGGAGGCC...CGAAATCAGCAGGACGACTGTTTTCCCAACACGGGTAAATCTAGTACCATGTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR CAA 90 bp CCAGACAAATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACATCTGCTGCCGCGGGTaGGCCGTGGACAGGTTCCCA +
Preference number: 5 (lower is better)
Translates to: PDKCSYNIYSSMPESNYDICCRG*AVDRFP
Trigger: TGGGAACCTGTCCACGGCCAACCCGCGGCAGCAGAT...GTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATTTGTCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR CAA 90 bp TGCTTCCAGCCGATCCTCAGATTAAGTGGAAGCAAACGCCTGAAAGTGAGCCCTTCCAAGGTGCTGGAATaGGACAGCACAAAGAGCCTT +
Preference number: 5 (lower is better)
Translates to: CFQPILRLSGSKRLKVSPSKVLE*DSTKSL
Trigger: AAGGCTCTTTGTGCTGTCCAATTCCAGCACCTTGGA...AGGGCTCACTTTCAGGCGTTTGCTTCCACTTAATCTGAGGATCGGCTGGAAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422464.5
ENST00000625793.2
CDS-3UTR CAA 90 bp CTACGACATGGTACTAGATTTACCCGTGTTGGGAAAACAGTCGTCCTGCTGATTTACAAGTCCAGGATCTaGTCGGCCACGCTCCTGCTG +
Preference number: 5 (lower is better)
Translates to: LRHGTRFTRVGKTVVLLIYKSRI*SATLLL
Trigger: CAGCAGGAGCGTGGCCGACAAGATCCTGGACTTGTA...AATCAGCAGGACGACTGTTTTCCCAACACGGGTAAATCTAGTACCATGTCGTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000469607.3
CDS-3UTR CAA 90 bp CCTTCCTCTCCTGTGCTTCCAGCCGATCCTCAGATTAAGTGGAAGCAAACGCCTAGCCAGACATCGATGTaGTCAGGATGCTTGTACAAG +
Preference number: 5 (lower is better)
Translates to: PSSPVLPADPQIKWKQTPSQTSM*SGCLYK
Trigger: CTTGTACAAGCATCCTGACAACATCGATGTCTGGCT...AGGCGTTTGCTTCCACTTAATCTGAGGATCGGCTGGAAGCACAGGAGAGGAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422464.5
ENST00000625793.2
CDS-3UTR CAA 90 bp CTACGACATGGTACTAGATTTACCCGTGTTGGGAAAACAGTCGTCCTGCTGATTGGGGAATTTGCCGACTaGGAAGGCATCCATGGGCAC +
Preference number: 5 (lower is better)
Translates to: LRHGTRFTRVGKTVVLLIGEFAD*EGIHGH
Trigger: GTGCCCATGGATGCCTTCCAAGTCGGCAAATTCCCC...AATCAGCAGGACGACTGTTTTCCCAACACGGGTAAATCTAGTACCATGTCGTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000469607.3
CDS-3UTR CAA 90 bp GACAAATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACATGGAGCTGCTCCCGGCCTaGGAGCTCATACCCGTGCCG +
Preference number: 5 (lower is better)
Translates to: DKCSYNIYSSMPESNYDMELLPA*ELIPVP
Trigger: CGGCACGGGTATGAGCTCCAAGGCCGGGAGCAGCTC...CATGTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATTTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000446278.5
CDS-3UTR CAA 90 bp CCTGAGAGTAACTACGACATGGTACTAGATTTACCCGTGTTGGGAAAACAGTCGCACTGGAAGCCGCCTTaGGTGTTTCTGCACCTCGCA +
Preference number: 5 (lower is better)
Translates to: PESNYDMVLDLPVLGKQSHWKPP*VFLHLA
Trigger: TGCGAGGTGCAGAAACACCAAAGGCGGCTTCCAGTG...CGACTGTTTTCCCAACACGGGTAAATCTAGTACCATGTCGTAGTTACTCTCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000382201.7
CDS-3UTR CAA 90 bp GAGACAAGTCACTTTGCCTTGTTGGTCCTTAAGGCTCCAGCCTCTCCCTCAGAACTAGATTTACCCGTGTaGGGAAAACAGTCGTCCTGC +
Preference number: 5 (lower is better)
Translates to: ETSHFALLVLKAPASPSELDLPV*GKQSSC
Trigger: GCAGGACGACTGTTTTCCCAACACGGGTAAATCTAG...TTCTGAGGGAGAGGCTGGAGCCTTAAGGACCAACAAGGCAAAGTGACTTGTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329066.9
ENST00000422464.5
CDS-3UTR CAA 90 bp GCTTCAGTTTCGCATTATTTGGTCTGTCCTGCTGGAAGGTTCCTAGTTAAACAGACCCAGGGGCAGGCTTaGCAGGTGGATGTAGACGTC +
Preference number: 5 (lower is better)
Translates to: ASVSHYLVCPAGRFLVKQTQGQA*QVDVDV
Trigger: GACGTCTACATCCACCTGCAAAGCCTGCCCCTGGGT...CTGTTTAACTAGGAACCTTCCAGCAGGACAGACCAAATAATGCGAAACTGAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382269.7
ENST00000539820.5
ENST00000617910.3
ENST00000629774.2
CDS-3UTR CAA 90 bp CAAACCAAAGAAAGGTTCAGGCTCTACTGCAGGACCCAGGGGCAGGCTTTGCAGGCTGAGGCCCTGGTCTaGAGGTTGTTAAAATGTAAA +
Preference number: 5 (lower is better)
Translates to: QTKERFRLYCRTQGQALQAEALV*RLLKCK
Trigger: TTTACATTTTAACAACCTCAAGACCAGGGCCTCAGC...CTGCAAAGCCTGCCCCTGGGTCCTGCAGTAGAGCCTGAACCTTTCTTTGGTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382269.7
ENST00000539820.5
ENST00000617910.3
ENST00000629774.2
CDS-3UTR CAA 90 bp AATCTCTGGAGGATGAGACAAGTCACTTTGCCTTGTTGGTCCTTAAGGCTCCAGAGGCAAGAGGATTGCTaGAGCAGGAGGGTCGAAGCT +
Preference number: 5 (lower is better)
Translates to: NLWRMRQVTLPCWSLRLQRQEDC*SRRVEA
Trigger: AGCTTCGACCCTCCTGCTCAAGCAATCCTCTTGCCT...CTGGAGCCTTAAGGACCAACAAGGCAAAGTGACTTGTCTCATCCTCCAGAGATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422464.5
CDS-3UTR CAA 90 bp AAAGAGTCGTACGGTGATTTTGGGAACATGAAGCTGTTCTGCAGTGTCCTGCCATGTGGTCCCAGCACTTaGGGAGTTTCAGACTGGAGG +
Preference number: 5 (lower is better)
Translates to: KESYGDFGNMKLFCSVLPCGPST*GVSDWR
Trigger: CCTCCAGTCTGAAACTCCCAAAGTGCTGGGACCACA...TGGCAGGACACTGCAGAACAGCTTCATGTTCCCAAAATCACCGTACGACTCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422464.5
CDS GCA 90 bp ACTCTGGCGTCAGAAGGCCCAAGTAGTGCTCAAGTCCCTTTCAGCTaGTCTATGAAGTGTGAAGAATCCCTGGTTCCATTCAAGAGCCTT +
Preference number: 5 (lower is better)
Translates to: TLASEGPSSAQVPFS*SMKCEESLVPFKSL
Trigger: AAGGCTCTTGAATGGAACCAGGGATTCTTCACACTTCATAGAGCAGCTGAAAGGGACTTGAGCACTACTTGGGCCTTCTGACGCCAGAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650224.1
CDS-3UTR CAA 90 bp GTGTTTGGAAAAGAGTCGTACGGTGATTTTGGGAACATGAAGCTGTTCTGCAGTGTGTCCACCAGGCGCTaGCTTTCCTCCAAGACGCTA +
Preference number: 5 (lower is better)
Translates to: VFGKESYGDFGNMKLFCSVSTRR*LSSKTL
Trigger: TAGCGTCTTGGAGGAAAGCAAGCGCCTGGTGGACAC...ACTGCAGAACAGCTTCATGTTCCCAAAATCACCGTACGACTCTTTTCCAAACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
CDS-3UTR CAA 90 bp GCTTCAGTTTCGCATTATTTGGTCTGTCCTGCTGGAAGGTTCCTAGTTAAACAGGTGTCCACCAGGCGCTaGCTTTCCTCCAAGACGCTA +
Preference number: 5 (lower is better)
Translates to: ASVSHYLVCPAGRFLVKQVSTRR*LSSKTL
Trigger: TAGCGTCTTGGAGGAAAGCAAGCGCCTGGTGGACAC...CTGTTTAACTAGGAACCTTCCAGCAGGACAGACCAAATAATGCGAAACTGAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382269.7
ENST00000539820.5
ENST00000617910.3
ENST00000629774.2
CDS-3UTR CAA 90 bp GAGAGTAACTACGACATGGTACTAGATTTACCCGTGTTGGGAAAACAGTCGTCCGGGCAATCACTCCGCTaGTTGGCTCAGGAAGTTTGG +
Preference number: 5 (lower is better)
Translates to: ESNYDMVLDLPVLGKQSSGQSLR*LAQEVW
Trigger: CCAAACTTCCTGAGCCAACAAGCGGAGTGATTGCCC...GGACGACTGTTTTCCCAACACGGGTAAATCTAGTACCATGTCGTAGTTACTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR CAA 90 bp TCACTGCTGCCGGCTGAGGCCCTGGTCTTGAGGTTGTTAAAATGTAAACTTAGGGTGATGGGCCTGTATTaGTTCGCCAGGCAAGTGTTT +
Preference number: 5 (lower is better)
Translates to: SLLPAEALVLRLLKCKLRVMGLY*FARQVF
Trigger: AAACACTTGCCTGGCGAACAAATACAGGCCCATCAC...CCTAAGTTTACATTTTAACAACCTCAAGACCAGGGCCTCAGCCGGCAGCAGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382269.7
ENST00000539820.5
ENST00000617910.3
ENST00000629774.2
CDS-3UTR CAA 90 bp TCATCCATGCCTGAGAGTAACTACGACATGGTACTAGATTTACCCGTGTTGGGACTGGGGTGGTCTCTGTaGTTGCAAGCTCCTGTGATG +
Preference number: 5 (lower is better)
Translates to: SSMPESNYDMVLDLPVLGLGWSL*LQAPVM
Trigger: CATCACAGGAGCTTGCAACAACAGAGACCACCCCAG...TCCCAACACGGGTAAATCTAGTACCATGTCGTAGTTACTCTCAGGCATGGATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR CAA 90 bp TATTCATCCATGCCTGAGAGTAACTACGACATGGTACTAGATTTACCCGTGTTGGGCAGTGGGAACCCGTaGTACAAGAAGCCGGGGTTC +
Preference number: 5 (lower is better)
Translates to: YSSMPESNYDMVLDLPVLGSGNP*YKKPGF
Trigger: GAACCCCGGCTTCTTGTACAACGGGTTCCCACTGCC...CAACACGGGTAAATCTAGTACCATGTCGTAGTTACTCTCAGGCATGGATGAATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR CAA 90 bp TTGGTGAATCTCTGGAGGATGAGACAAGTCACTTTGCCTTGTTGGTCCTTAAGGGTCGTGGTCGATGTATaGTCCCCATGCCATCAGGAG +
Preference number: 5 (lower is better)
Translates to: LVNLWRMRQVTLPCWSLRVVVDV*SPCHQE
Trigger: CTCCTGATGGCATGGGGACAATACATCGACCACGAC...CCTTAAGGACCAACAAGGCAAAGTGACTTGTCTCATCCTCCAGAGATTCACCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329066.9
ENST00000422464.5
CDS-3UTR CAA 90 bp ACTAGATTTACCCGTGTTGGGAAAACAGTCGTCCTGCTGATTTCGGATTTGCCTGTCGTGGTCGATGTATaGTCCCCATGCCATCAGGAG +
Preference number: 5 (lower is better)
Translates to: TRFTRVGKTVVLLISDLPVVVDV*SPCHQE
Trigger: CTCCTGATGGCATGGGGACAATACATCGACCACGAC...AGGCAAATCCGAAATCAGCAGGACGACTGTTTTCCCAACACGGGTAAATCTAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR CAA 90 bp CCAGACAAATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACCCCCCGAAGGCAGCTTaGCTGGTGCTCTGTGGTGTG +
Preference number: 5 (lower is better)
Translates to: PDKCSYNIYSSMPESNYDPPKAA*LVLCGV
Trigger: CACACCACAGAGCACCAGCAAAGCTGCCTTCGGGGG...GTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATTTGTCTGG
50% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR CAA 90 bp CCTTCCTCTCCTGTGCTTCCAGCCGATCCTCAGATTAAGTGGAAGCAAACGCCTGGGAAAACATGGGTTTaGGTTCTCACAAGTCATCTG +
Preference number: 5 (lower is better)
Translates to: PSSPVLPADPQIKWKQTPGKTWV*VLTSHL
Trigger: CAGATGACTTGTGAGAACCAAAACCCATGTTTTCCC...AGGCGTTTGCTTCCACTTAATCTGAGGATCGGCTGGAAGCACAGGAGAGGAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422464.5
ENST00000625793.2
CDS-3UTR CAA 90 bp GTGCTTCCAGCCGATCCTCAGATTAAGTGGAAGCAAACGCCTGAAAGTGAGCCCGGGAAAACATGGGTTTaGGTTCTCACAAGTCATCTG +
Preference number: 5 (lower is better)
Translates to: VLPADPQIKWKQTPESEPGKTWV*VLTSHL
Trigger: CAGATGACTTGTGAGAACCAAAACCCATGTTTTCCC...GGGCTCACTTTCAGGCGTTTGCTTCCACTTAATCTGAGGATCGGCTGGAAGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422464.5
ENST00000625793.2
CDS-3UTR CAA 90 bp AGTAACTACGACATGGTACTAGATTTACCCGTGTTGGGAAAACAGTCGTCCTGCGGCCTCCTCCGGGAGTaGTATGGGAAAACATGGGTT +
Preference number: 5 (lower is better)
Translates to: SNYDMVLDLPVLGKQSSCGLLRE*YGKTWV
Trigger: AACCCATGTTTTCCCATACAACTCCCGGAGGAGGCC...GCAGGACGACTGTTTTCCCAACACGGGTAAATCTAGTACCATGTCGTAGTTACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR CAA 90 bp GGCCAGACAAATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGGCTGTGGAGAACACGTaGGACACAGTGGGGTTGGCG +
Preference number: 5 (lower is better)
Translates to: GQTNAAITFIHPCLRVTTAVENT*DTVGLA
Trigger: CGCCAACCCCACTGTGTCCAACGTGTTCTCCACAGC...CGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATTTGTCTGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000446278.5
CDS-3UTR CAA 90 bp CCAGACAAATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACCGGCCCCTCTGCAGGTaGATGGACGCCAGATCCAAG +
Preference number: 5 (lower is better)
Translates to: PDKCSYNIYSSMPESNYDRPLCR*MDARSK
Trigger: CTTGGATCTGGCGTCCATCAACCTGCAGAGGGGCCG...GTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATTTGTCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000422464.5
CDS-3UTR CAA 90 bp GATTTGCCTGTGTTTGGAAAAGAGTCGTACGGTGATTTTGGGAACATGAAGCTGTACAAGTCCAGGATCTaGTCGGCCACGCTCCTGCTG +
Preference number: 5 (lower is better)
Translates to: DLPVFGKESYGDFGNMKLYKSRI*SATLLL
Trigger: CAGCAGGAGCGTGGCCGACAAGATCCTGGACTTGTA...CAGCTTCATGTTCCCAAAATCACCGTACGACTCTTTTCCAAACACAGGCAAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000469607.3
CDS-3UTR CAA 90 bp AAGCAAACGCCTGAAAGTGAGCCCTTAGTTTTGGAACCGGTTTGTACAAATGGAGGGGAATTTGCCGACTaGGAAGGCATCCATGGGCAC +
Preference number: 5 (lower is better)
Translates to: KQTPESEPLVLEPVCTNGGEFAD*EGIHGH
Trigger: GTGCCCATGGATGCCTTCCAAGTCGGCAAATTCCCC...TCCATTTGTACAAACCGGTTCCAAAACTAAGGGCTCACTTTCAGGCGTTTGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422464.5
ENST00000625793.2
CDS-3UTR CAA 90 bp CGACATGGTACTAGATTTACCCGTGTTGGGAAAACAGTCGTCCTGCTGATTTCGAAGTCTTCGGGGAATTaGCCGACTTGGAAGGCATCC +
Preference number: 5 (lower is better)
Translates to: RHGTRFTRVGKTVVLLISKSSGN*PTWKAS
Trigger: GGATGCCTTCCAAGTCGGCAAATTCCCCGAAGACTT...CGAAATCAGCAGGACGACTGTTTTCCCAACACGGGTAAATCTAGTACCATGTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000469607.3
CDS-3UTR CAA 90 bp GAGGCTCATGTGTTGGTGAATCTCTGGAGGATGAGACAAGTCACTTTGCCTTGTGCCACACTTGTCGTCTaGAGGAAAGGTTTCCCTCCA +
Preference number: 5 (lower is better)
Translates to: EAHVLVNLWRMRQVTLPCATLVV*RKGFPP
Trigger: TGGAGGGAAACCTTTCCTCAAGACGACAAGTGTGGC...ACAAGGCAAAGTGACTTGTCTCATCCTCCAGAGATTCACCAACACATGAGCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329066.9
ENST00000422464.5
CDS-3UTR CAA 90 bp AGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACATGGTACTAGATGAGCTGCTCCCGGCCTaGGAGCTCATACCCGTGCCG +
Preference number: 5 (lower is better)
Translates to: SYNIYSSMPESNYDMVLDELLPA*ELIPVP
Trigger: CGGCACGGGTATGAGCTCCAAGGCCGGGAGCAGCTC...ATCTAGTACCATGTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000446278.5
ENST00000469607.3
CDS-3UTR CAA 90 bp TTTGGAAAAGAGTCGTACGGTGATTTTGGGAACATGAAGCTGTTCTGCAGTGTCCACTGGAAGCCGCCTTaGGTGTTTCTGCACCTCGCA +
Preference number: 5 (lower is better)
Translates to: FGKESYGDFGNMKLFCSVHWKPP*VFLHLA
Trigger: TGCGAGGTGCAGAAACACCAAAGGCGGCTTCCAGTG...GACACTGCAGAACAGCTTCATGTTCCCAAAATCACCGTACGACTCTTTTCCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000382201.7
CDS-3UTR CAA 90 bp CGACATGGTACTAGATTTACCCGTGTTGGGAAAACAGTCGTCCTGCTGATTTCGGTGGAGACAGGAGGATaGCAAGAGTGGTGTTTCCAG +
Preference number: 5 (lower is better)
Translates to: RHGTRFTRVGKTVVLLISVETGG*QEWCFQ
Trigger: CTGGAAACACCACTCTTGCAATCCTCCTGTCTCCAC...CGAAATCAGCAGGACGACTGTTTTCCCAACACGGGTAAATCTAGTACCATGTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329066.9
ENST00000422464.5
CDS-3UTR CAA 90 bp GGGAAGTTTCTGGCTTCCGGACAAATGCTTGTTTGCAGGAGGCCACAGAGGATCATGAGACAAGTCACTTaGCCTTGTTGGTCCTTAAGG +
Preference number: 5 (lower is better)
Translates to: GKFLASGQMLVCRRPQRIMRQVT*PCWSLR
Trigger: CCTTAAGGACCAACAAGGCAAAGTGACTTGTCTCAT...GATCCTCTGTGGCCTCCTGCAAACAAGCATTTGTCCGGAAGCCAGAAACTTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422464.5
CDS-3UTR CAA 90 bp CCTGTGTTTGGAAAAGAGTCGTACGGTGATTTTGGGAACATGAAGCTGTTCTGCCCTCCTGTGCCACTGTaGTCATTCGTGGGTGAGATC +
Preference number: 5 (lower is better)
Translates to: PVFGKESYGDFGNMKLFCPPVPL*SFVGEI
Trigger: GATCTCACCCACGAATGACAACAGTGGCACAGGAGG...GCAGAACAGCTTCATGTTCCCAAAATCACCGTACGACTCTTTTCCAAACACAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329066.9
ENST00000422464.5
CDS-3UTR CAA 90 bp CAGGACCCAGGGGCAGGCTTTGCAGGTGGATGTAGACGTCATTGGAGAAAAGCTGCCCTGGTCTTGAGGTaGTTAAAATGTAAACTTAGG +
Preference number: 5 (lower is better)
Translates to: QDPGAGFAGGCRRHWRKAALVLR*LKCKLR
Trigger: CCTAAGTTTACATTTTAACAACCTCAAGACCAGGGC...AGCTTTTCTCCAATGACGTCTACATCCACCTGCAAAGCCTGCCCCTGGGTCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000382269.7
ENST00000539820.5
ENST00000617910.3
ENST00000629774.2
CDS-3UTR CAA 90 bp CAAACCAAAGAAAGGTTCAGGCTCTACTGCAGGACCCAGGGGCAGGCTTTGCAGGCCCTGGTCTTGAGGTaGTTAAAATGTAAACTTAGG +
Preference number: 5 (lower is better)
Translates to: QTKERFRLYCRTQGQALQALVLR*LKCKLR
Trigger: CCTAAGTTTACATTTTAACAACCTCAAGACCAGGGC...CTGCAAAGCCTGCCCCTGGGTCCTGCAGTAGAGCCTGAACCTTTCTTTGGTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382269.7
ENST00000539820.5
ENST00000617910.3
ENST00000629774.2
CDS-3UTR CAA 90 bp GGCCAGACAAATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGGTGTCCACCAGGCGCTaGCTTTCCTCCAAGACGCTA +
Preference number: 5 (lower is better)
Translates to: GQTNAAITFIHPCLRVTTVSTRR*LSSKTL
Trigger: TAGCGTCTTGGAGGAAAGCAAGCGCCTGGTGGACAC...CGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATTTGTCTGGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
CDS-3UTR CAA 90 bp GATTTGCCTGTGTTTGGAAAAGAGTCGTACGGTGATTTTGGGAACATGAAGCTGGGGCAATCACTCCGCTaGTTGGCTCAGGAAGTTTGG +
Preference number: 5 (lower is better)
Translates to: DLPVFGKESYGDFGNMKLGQSLR*LAQEVW
Trigger: CCAAACTTCCTGAGCCAACAAGCGGAGTGATTGCCC...CAGCTTCATGTTCCCAAAATCACCGTACGACTCTTTTCCAAACACAGGCAAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR CAA 90 bp AAAGCTTTGACTGGCTTCAGTTTCGCATTATTTGGTCTGTCCTGCTGGAAGGTTGGGCAATCACTCCGCTaGTTGGCTCAGGAAGTTTGG +
Preference number: 5 (lower is better)
Translates to: KALTGFSFALFGLSCWKVGQSLR*LAQEVW
Trigger: CCAAACTTCCTGAGCCAACAAGCGGAGTGATTGCCC...AACCTTCCAGCAGGACAGACCAAATAATGCGAAACTGAAGCCAGTCAAAGCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382269.7
ENST00000539820.5
ENST00000617910.3
ENST00000629774.2
CDS-3UTR CAA 90 bp GCTTCAGTTTCGCATTATTTGGTCTGTCCTGCTGGAAGGTTCCTAGTTAAACAGGGGCAATCACTCCGCTaGTTGGCTCAGGAAGTTTGG +
Preference number: 5 (lower is better)
Translates to: ASVSHYLVCPAGRFLVKQGQSLR*LAQEVW
Trigger: CCAAACTTCCTGAGCCAACAAGCGGAGTGATTGCCC...CTGTTTAACTAGGAACCTTCCAGCAGGACAGACCAAATAATGCGAAACTGAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382269.7
ENST00000539820.5
ENST00000617910.3
ENST00000629774.2
CDS-3UTR CAA 90 bp TTGCCTGTGTTTGGAAAAGAGTCGTACGGTGATTTTGGGAACATGAAGCTGTTCCTGGGGTGGTCTCTGTaGTTGCAAGCTCCTGTGATG +
Preference number: 5 (lower is better)
Translates to: LPVFGKESYGDFGNMKLFLGWSL*LQAPVM
Trigger: CATCACAGGAGCTTGCAACAACAGAGACCACCCCAG...GAACAGCTTCATGTTCCCAAAATCACCGTACGACTCTTTTCCAAACACAGGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR CAA 90 bp AAGCAAACGCCTGAAAGTGAGCCCTTAGTTTTGGAACCGGTTTGTACAAATGGACTGGGGTGGTCTCTGTaGTTGCAAGCTCCTGTGATG +
Preference number: 5 (lower is better)
Translates to: KQTPESEPLVLEPVCTNGLGWSL*LQAPVM
Trigger: CATCACAGGAGCTTGCAACAACAGAGACCACCCCAG...TCCATTTGTACAAACCGGTTCCAAAACTAAGGGCTCACTTTCAGGCGTTTGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422464.5
ENST00000625793.2
CDS-3UTR CAA 90 bp GACAAATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACATGCCCCCGAAGGCAGCTTaGCTGGTGCTCTGTGGTGTG +
Preference number: 5 (lower is better)
Translates to: DKCSYNIYSSMPESNYDMPPKAA*LVLCGV
Trigger: CACACCACAGAGCACCAGCAAAGCTGCCTTCGGGGG...CATGTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATTTGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR CAA 90 bp TTTGGAAAAGAGTCGTACGGTGATTTTGGGAACATGAAGCTGTTCTGCAGTGTCGGCCTCCTCCGGGAGTaGTATGGGAAAACATGGGTT +
Preference number: 5 (lower is better)
Translates to: FGKESYGDFGNMKLFCSVGLLRE*YGKTWV
Trigger: AACCCATGTTTTCCCATACAACTCCCGGAGGAGGCC...GACACTGCAGAACAGCTTCATGTTCCCAAAATCACCGTACGACTCTTTTCCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR CAA 90 bp AAATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACATGGTAATCTGCTGCCGCGGGTaGGCCGTGGACAGGTTCCCA +
Preference number: 5 (lower is better)
Translates to: KCSYNIYSSMPESNYDMVICCRG*AVDRFP
Trigger: TGGGAACCTGTCCACGGCCAACCCGCGGCAGCAGAT...TACCATGTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR CAA 90 bp AAAGCCCCAGAAGGAACAAATCAGGCAATGTTTACAAGAAAAGGCCAGACAAATGCTGTGGAGAACACGTaGGACACAGTGGGGTTGGCG +
Preference number: 5 (lower is better)
Translates to: KAPEGTNQAMFTRKGQTNAVENT*DTVGLA
Trigger: CGCCAACCCCACTGTGTCCAACGTGTTCTCCACAGC...ATTTGTCTGGCCTTTTCTTGTAAACATTGCCTGATTTGTTCCTTCTGGGGCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR CAA 90 bp ACAAATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACATGGCGGCCCCTCTGCAGGTaGATGGACGCCAGATCCAAG +
Preference number: 5 (lower is better)
Translates to: TNAAITFIHPCLRVTTTWRPLCR*MDARSK
Trigger: CTTGGATCTGGCGTCCATCAACCTGCAGAGGGGCCG...CCATGTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000422464.5
CDS-3UTR CAA 90 bp TATTCATCCATGCCTGAGAGTAACTACGACATGGTACTAGATTTACCCGTGTTGCTGGTGAGGCCAGTGTaGTCACAGATGACCCGAGAC +
Preference number: 5 (lower is better)
Translates to: YSSMPESNYDMVLDLPVLLVRPV*SQMTRD
Trigger: GTCTCGGGTCATCTGTGACAACACTGGCCTCACCAG...CAACACGGGTAAATCTAGTACCATGTCGTAGTTACTCTCAGGCATGGATGAATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000469607.3
CDS-3UTR CAA 90 bp ACTGTTCTGCTCTCTGCTTCTCTCAGTTCAAAAGTCAGACTTACACAAGTGAGTCTGGTGAGGCCAGTGTaGTCACAGATGACCCGAGAC +
Preference number: 5 (lower is better)
Translates to: TVLLSASLSSKVRLTQVSLVRPV*SQMTRD
Trigger: GTCTCGGGTCATCTGTGACAACACTGGCCTCACCAG...ACTCACTTGTGTAAGTCTGACTTTTGAACTGAGAGAAGCAGAGAGCAGAACAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422464.5
ENST00000625793.2
CDS-3UTR CAA 90 bp TATTCATCCATGCCTGAGAGTAACTACGACATGGTACTAGATTTACCCGTGTTGGGGGAATTTGCCGACTaGGAAGGCATCCATGGGCAC +
Preference number: 5 (lower is better)
Translates to: YSSMPESNYDMVLDLPVLGEFAD*EGIHGH
Trigger: GTGCCCATGGATGCCTTCCAAGTCGGCAAATTCCCC...CAACACGGGTAAATCTAGTACCATGTCGTAGTTACTCTCAGGCATGGATGAATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000469607.3
CDS-3UTR CAA 90 bp AGTAACTACGACATGGTACTAGATTTACCCGTGTTGGGAAAACAGTCGTCCTGCAAGTCTTCGGGGAATTaGCCGACTTGGAAGGCATCC +
Preference number: 5 (lower is better)
Translates to: SNYDMVLDLPVLGKQSSCKSSGN*PTWKAS
Trigger: GGATGCCTTCCAAGTCGGCAAATTCCCCGAAGACTT...GCAGGACGACTGTTTTCCCAACACGGGTAAATCTAGTACCATGTCGTAGTTACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000469607.3
CDS-3UTR CAA 90 bp GGTACTAGATTTACCCGTGTTGGGAAAACAGTCGTCCTGCTGATTTCGGATTTGGCCACACTTGTCGTCTaGAGGAAAGGTTTCCCTCCA +
Preference number: 5 (lower is better)
Translates to: GTRFTRVGKTVVLLISDLATLVV*RKGFPP
Trigger: TGGAGGGAAACCTTTCCTCAAGACGACAAGTGTGGC...CAAATCCGAAATCAGCAGGACGACTGTTTTCCCAACACGGGTAAATCTAGTACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000469607.3
CDS-3UTR CAA 90 bp AGTAACTACGACATGGTACTAGATTTACCCGTGTTGGGAAAACAGTCGTCCTGCGCCACACTTGTCGTCTaGAGGAAAGGTTTCCCTCCA +
Preference number: 5 (lower is better)
Translates to: SNYDMVLDLPVLGKQSSCATLVV*RKGFPP
Trigger: TGGAGGGAAACCTTTCCTCAAGACGACAAGTGTGGC...GCAGGACGACTGTTTTCCCAACACGGGTAAATCTAGTACCATGTCGTAGTTACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000469607.3
CDS-3UTR CAA 90 bp TCATCCATGCCTGAGAGTAACTACGACATGGTACTAGATTTACCCGTGTTGGGACACTCGTTCACATCTTaGCAGAGGGGAGGCTGGAAA +
Preference number: 5 (lower is better)
Translates to: SSMPESNYDMVLDLPVLGHSFTS*QRGGWK
Trigger: TTTCCAGCCTCCCCTCTGCAAAGATGTGAACGAGTG...TCCCAACACGGGTAAATCTAGTACCATGTCGTAGTTACTCTCAGGCATGGATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000382201.7
CDS-3UTR CAA 90 bp AGTAACTACGACATGGTACTAGATTTACCCGTGTTGGGAAAACAGTCGTCCTGCCACTCGTTCACATCTTaGCAGAGGGGAGGCTGGAAA +
Preference number: 5 (lower is better)
Translates to: SNYDMVLDLPVLGKQSSCHSFTS*QRGGWK
Trigger: TTTCCAGCCTCCCCTCTGCAAAGATGTGAACGAGTG...GCAGGACGACTGTTTTCCCAACACGGGTAAATCTAGTACCATGTCGTAGTTACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000382201.7
CDS-3UTR CAA 90 bp AAAGAGTCGTACGGTGATTTTGGGAACATGAAGCTGTTCTGCAGTGTCCTGCCACGGATTTGCCTGTGTTaGGAAAAGAGTCGTACGGTG +
Preference number: 5 (lower is better)
Translates to: KESYGDFGNMKLFCSVLPRICLC*EKSRTV
Trigger: CACCGTACGACTCTTTTCCAAACACAGGCAAATCCG...TGGCAGGACACTGCAGAACAGCTTCATGTTCCCAAAATCACCGTACGACTCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000469607.3
CDS-3UTR CAA 90 bp CGACATGGTACTAGATTTACCCGTGTTGGGAAAACAGTCGTCCTGCTGATTTCGCGGATTTGCCTGTGTTaGGAAAAGAGTCGTACGGTG +
Preference number: 5 (lower is better)
Translates to: RHGTRFTRVGKTVVLLISRICLC*EKSRTV
Trigger: CACCGTACGACTCTTTTCCAAACACAGGCAAATCCG...CGAAATCAGCAGGACGACTGTTTTCCCAACACGGGTAAATCTAGTACCATGTCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000469607.3
CDS-3UTR CAA 90 bp ACACAGAACAGGATGGCCTGGCACCTAGGGAAAACAACAGTCTGGTATTTTTGGCTAGATTTACCCGTGTaGGGAAAACAGTCGTCCTGC +
Preference number: 5 (lower is better)
Translates to: TQNRMAWHLGKTTVWYFWLDLPV*GKQSSC
Trigger: GCAGGACGACTGTTTTCCCAACACGGGTAAATCTAG...CCAAAAATACCAGACTGTTGTTTTCCCTAGGTGCCAGGCCATCCTGTTCTGTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000329066.9
ENST00000422464.5
CDS-3UTR CAA 90 bp CGACATGGTACTAGATTTACCCGTGTTGGGAAAACAGTCGTCCTGCTGATTTCGCTAGATTTACCCGTGTaGGGAAAACAGTCGTCCTGC +
Preference number: 5 (lower is better)
Translates to: RHGTRFTRVGKTVVLLISLDLPV*GKQSSC
Trigger: GCAGGACGACTGTTTTCCCAACACGGGTAAATCTAG...CGAAATCAGCAGGACGACTGTTTTCCCAACACGGGTAAATCTAGTACCATGTCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000469607.3
CDS-3UTR CAA 90 bp AAAGAGTCGTACGGTGATTTTGGGAACATGAAGCTGTTCTGCAGTGTCCTGCCACTAGATTTACCCGTGTaGGGAAAACAGTCGTCCTGC +
Preference number: 5 (lower is better)
Translates to: KESYGDFGNMKLFCSVLPLDLPV*GKQSSC
Trigger: GCAGGACGACTGTTTTCCCAACACGGGTAAATCTAG...TGGCAGGACACTGCAGAACAGCTTCATGTTCCCAAAATCACCGTACGACTCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000469607.3
CDS-3UTR CAA 90 bp GTTGGTGAATCTCTGGAGGATGAGACAAGTCACTTTGCCTTGTTGGTCCTTAAGGTGGAGACAGGAGGATaGCAAGAGTGGTGTTTCCAG +
Preference number: 5 (lower is better)
Translates to: VGESLEDETSHFALLVLKVETGG*QEWCFQ
Trigger: CTGGAAACACCACTCTTGCAATCCTCCTGTCTCCAC...CTTAAGGACCAACAAGGCAAAGTGACTTGTCTCATCCTCCAGAGATTCACCAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329066.9
ENST00000422464.5
CDS-3UTR CAA 90 bp CTACGACATGGTACTAGATTTACCCGTGTTGGGAAAACAGTCGTCCTGCTGATTAGTCACTTTGCCTTGTaGGTCCTTAAGGCTCCAGCC +
Preference number: 5 (lower is better)
Translates to: LRHGTRFTRVGKTVVLLISHFAL*VLKAPA
Trigger: GGCTGGAGCCTTAAGGACCAACAAGGCAAAGTGACT...AATCAGCAGGACGACTGTTTTCCCAACACGGGTAAATCTAGTACCATGTCGTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329066.9
ENST00000422464.5
CDS-3UTR CAA 90 bp AATCTCTGGAGGATGAGACAAGTCACTTTGCCTTGTTGGTCCTTAAGGCTCCAGTCTGAGGCTCATGTGTaGGTGAATCTCTGGAGGATG +
Preference number: 5 (lower is better)
Translates to: NLWRMRQVTLPCWSLRLQSEAHV*VNLWRM
Trigger: CATCCTCCAGAGATTCACCAACACATGAGCCTCAGA...CTGGAGCCTTAAGGACCAACAAGGCAAAGTGACTTGTCTCATCCTCCAGAGATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329066.9
ENST00000422464.5
CDS-3UTR CAA 90 bp CCAGTGCCAATGTCATTGTGTGGTCAGCAGAGATTCTCCCAGGAGCGTCAGTGGACAATGTGTGAAGCCTaGAACGTAGGAGATTTTAGA +
Preference number: 5 (lower is better)
Translates to: PVPMSLCGQQRFSQERQWTMCEA*NVGDFR
Trigger: TCTAAAATCTCCTACGTTCAAGGCTTCACACATTGT...CCACTGACGCTCCTGGGAGAATCTCTGCTGACCACACAATGACATTGGCACTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382269.7
ENST00000539820.5
ENST00000617910.3
ENST00000629774.2
CDS-3UTR CAA 90 bp ACAAATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACATGGCCAGGCCAGGTCCTTTaGGTTCCATGCGTGGGAGCC +
Preference number: 5 (lower is better)
Translates to: TNAAITFIHPCLRVTTTWPGQVL*VPCVGA
Trigger: GGCTCCCACGCATGGAACCAAAAGGACCTGGCCTGG...CCATGTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422464.5
CDS-3UTR CAA 90 bp AGTAACTACGACATGGTACTAGATTTACCCGTGTTGGGAAAACAGTCGTCCTGCCGGACAAATGCTTGTTaGCAGGAGGCCACAGAGGAT +
Preference number: 5 (lower is better)
Translates to: SNYDMVLDLPVLGKQSSCRTNAC*QEATED
Trigger: ATCCTCTGTGGCCTCCTGCAAACAAGCATTTGTCCG...GCAGGACGACTGTTTTCCCAACACGGGTAAATCTAGTACCATGTCGTAGTTACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422464.5
CDS-3UTR CAA 90 bp TTGGTGAATCTCTGGAGGATGAGACAAGTCACTTTGCCTTGTTGGTCCTTAAGGGTGATGGGCCTGTATTaGTTCGCCAGGCAAGTGTTT +
Preference number: 5 (lower is better)
Translates to: LVNLWRMRQVTLPCWSLRVMGLY*FARQVF
Trigger: AAACACTTGCCTGGCGAACAAATACAGGCCCATCAC...CCTTAAGGACCAACAAGGCAAAGTGACTTGTCTCATCCTCCAGAGATTCACCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329066.9
ENST00000422464.5
CDS-3UTR CAA 90 bp CCTGAGAGTAACTACGACATGGTACTAGATTTACCCGTGTTGGGAAAACAGTCGGTGATGGGCCTGTATTaGTTCGCCAGGCAAGTGTTT +
Preference number: 5 (lower is better)
Translates to: PESNYDMVLDLPVLGKQSVMGLY*FARQVF
Trigger: AAACACTTGCCTGGCGAACAAATACAGGCCCATCAC...CGACTGTTTTCCCAACACGGGTAAATCTAGTACCATGTCGTAGTTACTCTCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR CAA 90 bp CCAGACAAATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACGGGTGGTCTCTGTTGTaGCAAGCTCCTGTGATGGGC +
Preference number: 5 (lower is better)
Translates to: PDKCSYNIYSSMPESNYDGWSLL*QAPVMG
Trigger: GCCCATCACAGGAGCTTGCAACAACAGAGACCACCC...GTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATTTGTCTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR CAA 90 bp GACAAATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACATGGGCAGTGGGAACCCGTaGTACAAGAAGCCGGGGTTC +
Preference number: 5 (lower is better)
Translates to: DKCSYNIYSSMPESNYDMGSGNP*YKKPGF
Trigger: GAACCCCGGCTTCTTGTACAACGGGTTCCCACTGCC...CATGTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATTTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR CAA 90 bp AATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACATGGTACGCTGTGGAGAACACGTaGGACACAGTGGGGTTGGCG +
Preference number: 5 (lower is better)
Translates to: NAAITFIHPCLRVTTTWYAVENT*DTVGLA
Trigger: CGCCAACCCCACTGTGTCCAACGTGTTCTCCACAGC...GTACCATGTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000446278.5
CDS-3UTR CAA 90 bp TGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACATGGTACTAGCTGTGGAGAACACGTaGGACACAGTGGGGTTGGCG +
Preference number: 5 (lower is better)
Translates to: CSYNIYSSMPESNYDMVLAVENT*DTVGLA
Trigger: CGCCAACCCCACTGTGTCCAACGTGTTCTCCACAGC...TAGTACCATGTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000446278.5
ENST00000469607.3
CDS-3UTR CAA 90 bp AGACAGGAGGATTGCAAGAGTGGTGTTTCCAGGGTTCACAAAATAAAGATGTGTTCCTGCACCTGCAGTTaGGCTGGTCTTGCAAGAAGG +
Preference number: 5 (lower is better)
Translates to: RQEDCKSGVSRVHKIKMCSCTCS*AGLARR
Trigger: CCTTCTTGCAAGACCAGCCAAACTGCAGGTGCAGGA...ACACATCTTTATTTTGTGAACCCTGGAAACACCACTCTTGCAATCCTCCTGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329066.9
ENST00000422464.5
CDS-3UTR CAA 90 bp GGCCAGACAAATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGTCCTGCACCTGCAGTTaGGCTGGTCTTGCAAGAAGG +
Preference number: 5 (lower is better)
Translates to: GQTNAAITFIHPCLRVTTSCTCS*AGLARR
Trigger: CCTTCTTGCAAGACCAGCCAAACTGCAGGTGCAGGA...CGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATTTGTCTGGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000422464.5
CDS-3UTR CAA 90 bp ACTGTTCTGCTCTCTGCTTCTCTCAGTTCAAAAGTCAGACTTACACAAGTGAGTTCCTGCACCTGCAGTTaGGCTGGTCTTGCAAGAAGG +
Preference number: 5 (lower is better)
Translates to: TVLLSASLSSKVRLTQVSSCTCS*AGLARR
Trigger: CCTTCTTGCAAGACCAGCCAAACTGCAGGTGCAGGA...ACTCACTTGTGTAAGTCTGACTTTTGAACTGAGAGAAGCAGAGAGCAGAACAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422464.5
ENST00000625793.2
CDS-3UTR CAA 90 bp TTGGTGAATCTCTGGAGGATGAGACAAGTCACTTTGCCTTGTTGGTCCTTAAGGTCCAAGGTGCTGGAATaGGACAGCACAAAGAGCCTT +
Preference number: 5 (lower is better)
Translates to: LVNLWRMRQVTLPCWSLRSKVLE*DSTKSL
Trigger: AAGGCTCTTTGTGCTGTCCAATTCCAGCACCTTGGA...CCTTAAGGACCAACAAGGCAAAGTGACTTGTCTCATCCTCCAGAGATTCACCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329066.9
ENST00000422464.5
CDS-3UTR CAA 90 bp CCAGACAAATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACGGGGAATTTGCCGACTaGGAAGGCATCCATGGGCAC +
Preference number: 5 (lower is better)
Translates to: PDKCSYNIYSSMPESNYDGEFAD*EGIHGH
Trigger: GTGCCCATGGATGCCTTCCAAGTCGGCAAATTCCCC...GTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATTTGTCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000446278.5
CDS-3UTR CAA 90 bp TTTGGAAAAGAGTCGTACGGTGATTTTGGGAACATGAAGCTGTTCTGCAGTGTCAAGTCTTCGGGGAATTaGCCGACTTGGAAGGCATCC +
Preference number: 5 (lower is better)
Translates to: FGKESYGDFGNMKLFCSVKSSGN*PTWKAS
Trigger: GGATGCCTTCCAAGTCGGCAAATTCCCCGAAGACTT...GACACTGCAGAACAGCTTCATGTTCCCAAAATCACCGTACGACTCTTTTCCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000469607.3
CDS-3UTR CAA 90 bp CCAGACAAATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACCACTGGAAGCCGCCTTaGGTGTTTCTGCACCTCGCA +
Preference number: 5 (lower is better)
Translates to: PDKCSYNIYSSMPESNYDHWKPP*VFLHLA
Trigger: TGCGAGGTGCAGAAACACCAAAGGCGGCTTCCAGTG...GTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATTTGTCTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000382201.7
ENST00000446278.5
CDS-3UTR CAA 90 bp TCACTGCTGCCGGCTGAGGCCCTGGTCTTGAGGTTGTTAAAATGTAAACTTAGGTTCATTTTTCTGTTGTaGCAAGCTCCTGTGATGGGC +
Preference number: 5 (lower is better)
Translates to: SLLPAEALVLRLLKCKLRFIFLL*QAPVMG
Trigger: GCCCATCACAGGAGCTTGCAACAACAGAAAAATGAA...CCTAAGTTTACATTTTAACAACCTCAAGACCAGGGCCTCAGCCGGCAGCAGTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000382269.7
ENST00000539820.5
ENST00000617910.3
ENST00000629774.2
CDS-3UTR CAA 90 bp GAATCAGGAAGCATCAAACCAAAGAAAGGTTCAGGCTCTACTGCAGGACCCAGGTTCATTTTTCTGTTGTaGCAAGCTCCTGTGATGGGC +
Preference number: 5 (lower is better)
Translates to: ESGSIKPKKGSGSTAGPRFIFLL*QAPVMG
Trigger: GCCCATCACAGGAGCTTGCAACAACAGAAAAATGAA...CCTGGGTCCTGCAGTAGAGCCTGAACCTTTCTTTGGTTTGATGCTTCCTGATTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000382269.7
ENST00000539820.5
ENST00000617910.3
ENST00000629774.2
CDS-3UTR CAA 90 bp AATACAATGTGTGAAGCCTTGAACGTAGGAGATTTTAGATCCAGATGCTGTGAAACCCAGGGGCAGGCTTaGCAGGTGGATGTAGACGTC +
Preference number: 5 (lower is better)
Translates to: NTMCEALNVGDFRSRCCETQGQA*QVDVDV
Trigger: GACGTCTACATCCACCTGCAAAGCCTGCCCCTGGGT...TTCACAGCATCTGGATCTAAAATCTCCTACGTTCAAGGCTTCACACATTGTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382269.7
ENST00000539820.5
ENST00000617910.3
ENST00000629774.2
CDS-3UTR CAA 90 bp AGCAGGAACTCACTGCTGCCGGCTGAGGCCCTGGTCTTGAGGTTGTTAAAATGTACAATGTGTGAAGCCTaGAACGTAGGAGATTTTAGA +
Preference number: 5 (lower is better)
Translates to: SRNSLLPAEALVLRLLKCTMCEA*NVGDFR
Trigger: TCTAAAATCTCCTACGTTCAAGGCTTCACACATTGT...ACATTTTAACAACCTCAAGACCAGGGCCTCAGCCGGCAGCAGTGAGTTCCTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382269.7
ENST00000539820.5
ENST00000617910.3
ENST00000629774.2
CDS-3UTR CAA 90 bp CTGTGCTTCCAGCCGATCCTCAGATTAAGTGGAAGCAAACGCCTGAAAGTGAGCAGTGAGCCCTTAGTTTaGGAACCGGTTTGTACAAAT +
Preference number: 5 (lower is better)
Translates to: LCFQPILRLSGSKRLKVSSEPLV*EPVCTN
Trigger: ATTTGTACAAACCGGTTCCAAAACTAAGGGCTCACT...GCTCACTTTCAGGCGTTTGCTTCCACTTAATCTGAGGATCGGCTGGAAGCACAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422464.5
ENST00000625793.2
CDS-3UTR CAA 90 bp GGCCAGACAAATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGTTGCTGGCACTGCCCTaGCTGTGGCTGGAAAAGCTA +
Preference number: 5 (lower is better)
Translates to: GQTNAAITFIHPCLRVTTLLALP*LWLEKL
Trigger: TAGCTTTTCCAGCCACAGCAAGGGCAGTGCCAGCAA...CGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATTTGTCTGGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422464.5
CDS TCA 90 bp ATTTTGGGGGCAGCATGTAAGGGAGACATCCAGACATGTTTGCAATaGTGCTCAGCAGATCTTCTGATAAAGCATCCGTTGGATGCTGTG +
Preference number: 5 (lower is better)
Translates to: ILGAACKGDIQTCLQ*CSADLLIKHPLDAV
Trigger: CACAGCATCCAACGGATGCTTTATCAGAAGATCTGCTGAGCATCATTGCAAACATGTCTGGATGTCTCCCTTACATGCTGCCCCCAAAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 18 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382198.5
ENST00000382201.7
ENST00000382269.7
ENST00000422464.5
ENST00000423320.5
ENST00000539820.5
ENST00000613631.2
ENST00000617910.3
ENST00000622050.4
ENST00000625313.2
ENST00000625793.2
ENST00000627010.2
ENST00000627917.2
ENST00000628844.2
ENST00000629774.2
CDS-3UTR CAA 90 bp ACTAGATTTACCCGTGTTGGGAAAACAGTCGTCCTGCTGATTTCGGATTTGCCTCAATCACTCCGCTTGTaGGCTCAGGAAGTTTGGAAA +
Preference number: 5 (lower is better)
Translates to: TRFTRVGKTVVLLISDLPQSLRL*AQEVWK
Trigger: TTTCCAAACTTCCTGAGCCAACAAGCGGAGTGATTG...AGGCAAATCCGAAATCAGCAGGACGACTGTTTTCCCAACACGGGTAAATCTAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR CAA 90 bp GAGAGTAACTACGACATGGTACTAGATTTACCCGTGTTGGGAAAACAGTCGTCCCAATCACTCCGCTTGTaGGCTCAGGAAGTTTGGAAA +
Preference number: 5 (lower is better)
Translates to: ESNYDMVLDLPVLGKQSSQSLRL*AQEVWK
Trigger: TTTCCAAACTTCCTGAGCCAACAAGCGGAGTGATTG...GGACGACTGTTTTCCCAACACGGGTAAATCTAGTACCATGTCGTAGTTACTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR CAA 90 bp TGGAGAAAAGCTTTGACTGGCTTCAGTTTCGCATTATTTGGTCTGTCCTGCTGGCAATCACTCCGCTTGTaGGCTCAGGAAGTTTGGAAA +
Preference number: 5 (lower is better)
Translates to: WRKALTGFSFALFGLSCWQSLRL*AQEVWK
Trigger: TTTCCAAACTTCCTGAGCCAACAAGCGGAGTGATTG...CCAGCAGGACAGACCAAATAATGCGAAACTGAAGCCAGTCAAAGCTTTTCTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382269.7
ENST00000539820.5
ENST00000617910.3
ENST00000629774.2
CDS-3UTR CAA 90 bp GATTTGCCTGTGTTTGGAAAAGAGTCGTACGGTGATTTTGGGAACATGAAGCTGGTGATGGGCCTGTATTaGTTCGCCAGGCAAGTGTTT +
Preference number: 5 (lower is better)
Translates to: DLPVFGKESYGDFGNMKLVMGLY*FARQVF
Trigger: AAACACTTGCCTGGCGAACAAATACAGGCCCATCAC...CAGCTTCATGTTCCCAAAATCACCGTACGACTCTTTTCCAAACACAGGCAAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR CAA 90 bp TTTGGAAAAGAGTCGTACGGTGATTTTGGGAACATGAAGCTGTTCTGCAGTGTCGTGATGGGCCTGTATTaGTTCGCCAGGCAAGTGTTT +
Preference number: 5 (lower is better)
Translates to: FGKESYGDFGNMKLFCSVVMGLY*FARQVF
Trigger: AAACACTTGCCTGGCGAACAAATACAGGCCCATCAC...GACACTGCAGAACAGCTTCATGTTCCCAAAATCACCGTACGACTCTTTTCCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR CAA 90 bp AAAGCTTTGACTGGCTTCAGTTTCGCATTATTTGGTCTGTCCTGCTGGAAGGTTGTGATGGGCCTGTATTaGTTCGCCAGGCAAGTGTTT +
Preference number: 5 (lower is better)
Translates to: KALTGFSFALFGLSCWKVVMGLY*FARQVF
Trigger: AAACACTTGCCTGGCGAACAAATACAGGCCCATCAC...AACCTTCCAGCAGGACAGACCAAATAATGCGAAACTGAAGCCAGTCAAAGCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382269.7
ENST00000539820.5
ENST00000617910.3
ENST00000629774.2
CDS-3UTR CAA 90 bp GACAAATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACATGGGGTGGTCTCTGTTGTaGCAAGCTCCTGTGATGGGC +
Preference number: 5 (lower is better)
Translates to: DKCSYNIYSSMPESNYDMGWSLL*QAPVMG
Trigger: GCCCATCACAGGAGCTTGCAACAACAGAGACCACCC...CATGTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATTTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR CAA 90 bp AAATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACATGGTAGGCAGTGGGAACCCGTaGTACAAGAAGCCGGGGTTC +
Preference number: 5 (lower is better)
Translates to: KCSYNIYSSMPESNYDMVGSGNP*YKKPGF
Trigger: GAACCCCGGCTTCTTGTACAACGGGTTCCCACTGCC...TACCATGTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR CAA 90 bp AGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACATGGTACTAGATGCTGTGGAGAACACGTaGGACACAGTGGGGTTGGCG +
Preference number: 5 (lower is better)
Translates to: SYNIYSSMPESNYDMVLDAVENT*DTVGLA
Trigger: CGCCAACCCCACTGTGTCCAACGTGTTCTCCACAGC...ATCTAGTACCATGTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000446278.5
ENST00000469607.3
CDS-3UTR CAA 90 bp CCAGACAAATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACTCCTGCACCTGCAGTTaGGCTGGTCTTGCAAGAAGG +
Preference number: 5 (lower is better)
Translates to: PDKCSYNIYSSMPESNYDSCTCS*AGLARR
Trigger: CCTTCTTGCAAGACCAGCCAAACTGCAGGTGCAGGA...GTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATTTGTCTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000422464.5
CDS-3UTR CAA 90 bp ACAAATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACATGGTACAAGTCCAGGATCTaGTCGGCCACGCTCCTGCTG +
Preference number: 5 (lower is better)
Translates to: TNAAITFIHPCLRVTTTWYKSRI*SATLLL
Trigger: CAGCAGGAGCGTGGCCGACAAGATCCTGGACTTGTA...CCATGTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000446278.5
CDS-3UTR CAA 90 bp TGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACATGGTACTATACAAGTCCAGGATCTaGTCGGCCACGCTCCTGCTG +
Preference number: 5 (lower is better)
Translates to: CSYNIYSSMPESNYDMVLYKSRI*SATLLL
Trigger: CAGCAGGAGCGTGGCCGACAAGATCCTGGACTTGTA...TAGTACCATGTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000446278.5
ENST00000469607.3
CDS-3UTR CAA 90 bp AATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACATGGTACTACAAGTCCAGGATCTaGTCGGCCACGCTCCTGCTG +
Preference number: 5 (lower is better)
Translates to: NAAITFIHPCLRVTTTWYYKSRI*SATLLL
Trigger: CAGCAGGAGCGTGGCCGACAAGATCCTGGACTTGTA...GTACCATGTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000446278.5
CDS-3UTR CAA 90 bp AGTAACTACGACATGGTACTAGATTTACCCGTGTTGGGAAAACAGTCGTCCTGCAGCCAGACATCGATGTaGTCAGGATGCTTGTACAAG +
Preference number: 5 (lower is better)
Translates to: SNYDMVLDLPVLGKQSSCSQTSM*SGCLYK
Trigger: CTTGTACAAGCATCCTGACAACATCGATGTCTGGCT...GCAGGACGACTGTTTTCCCAACACGGGTAAATCTAGTACCATGTCGTAGTTACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000469607.3
CDS-3UTR CAA 90 bp CAGACAAATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACACTGGTGAGGCCAGTGTaGTCACAGATGACCCGAGAC +
Preference number: 5 (lower is better)
Translates to: QTNAAITFIHPCLRVTTTLVRPV*SQMTRD
Trigger: GTCTCGGGTCATCTGTGACAACACTGGCCTCACCAG...TGTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATTTGTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000446278.5
CDS-3UTR CAA 90 bp ACAAATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACATGGCTGGTGAGGCCAGTGTaGTCACAGATGACCCGAGAC +
Preference number: 5 (lower is better)
Translates to: TNAAITFIHPCLRVTTTWLVRPV*SQMTRD
Trigger: GTCTCGGGTCATCTGTGACAACACTGGCCTCACCAG...CCATGTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000446278.5
CDS-3UTR CAA 90 bp TATTCATCCATGCCTGAGAGTAACTACGACATGGTACTAGATTTACCCGTGTTGAAGTCTTCGGGGAATTaGCCGACTTGGAAGGCATCC +
Preference number: 5 (lower is better)
Translates to: YSSMPESNYDMVLDLPVLKSSGN*PTWKAS
Trigger: GGATGCCTTCCAAGTCGGCAAATTCCCCGAAGACTT...CAACACGGGTAAATCTAGTACCATGTCGTAGTTACTCTCAGGCATGGATGAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000469607.3
CDS-3UTR CAA 90 bp TGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACATGGTACTACACTGGAAGCCGCCTTaGGTGTTTCTGCACCTCGCA +
Preference number: 5 (lower is better)
Translates to: CSYNIYSSMPESNYDMVLHWKPP*VFLHLA
Trigger: TGCGAGGTGCAGAAACACCAAAGGCGGCTTCCAGTG...TAGTACCATGTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000382201.7
ENST00000446278.5
CDS-3UTR CAA 90 bp AAGCAAACGCCTGAAAGTGAGCCCTTAGTTTTGGAACCGGTTTGTACAAATGGACGGATTTGCCTGTGTTaGGAAAAGAGTCGTACGGTG +
Preference number: 5 (lower is better)
Translates to: KQTPESEPLVLEPVCTNGRICLC*EKSRTV
Trigger: CACCGTACGACTCTTTTCCAAACACAGGCAAATCCG...TCCATTTGTACAAACCGGTTCCAAAACTAAGGGCTCACTTTCAGGCGTTTGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422464.5
CDS-3UTR CAA 90 bp CCTGAGAGTAACTACGACATGGTACTAGATTTACCCGTGTTGGGAAAACAGTCGACAAGTCACTTTGCCTaGTTGGTCCTTAAGGCTCCA +
Preference number: 5 (lower is better)
Translates to: PESNYDMVLDLPVLGKQSTSHFA*LVLKAP
Trigger: TGGAGCCTTAAGGACCAACAAGGCAAAGTGACTTGT...CGACTGTTTTCCCAACACGGGTAAATCTAGTACCATGTCGTAGTTACTCTCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329066.9
ENST00000422464.5
CDS-3UTR CAA 90 bp TTGCCTGTGTTTGGAAAAGAGTCGTACGGTGATTTTGGGAACATGAAGCTGTTCTCTGAGGCTCATGTGTaGGTGAATCTCTGGAGGATG +
Preference number: 5 (lower is better)
Translates to: LPVFGKESYGDFGNMKLFSEAHV*VNLWRM
Trigger: CATCCTCCAGAGATTCACCAACACATGAGCCTCAGA...GAACAGCTTCATGTTCCCAAAATCACCGTACGACTCTTTTCCAAACACAGGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329066.9
ENST00000422464.5
CDS-3UTR CAA 90 bp AGGCCAGACAAATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACCCTCCTGTGCCACTGTaGTCATTCGTGGGTGAGATC +
Preference number: 5 (lower is better)
Translates to: RPDKCSYNIYSSMPESNYPPVPL*SFVGEI
Trigger: GATCTCACCCACGAATGACAACAGTGGCACAGGAGG...GTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATTTGTCTGGCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329066.9
ENST00000422464.5
CDS-3UTR CAA 90 bp GGCTTTGCAGGTGGATGTAGACGTCATTGGAGAAAAGCTTTGACTGGCTTCAGTGCTGAGGCCCTGGTCTaGAGGTTGTTAAAATGTAAA +
Preference number: 5 (lower is better)
Translates to: GFAGGCRRHWRKALTGFSAEALV*RLLKCK
Trigger: TTTACATTTTAACAACCTCAAGACCAGGGCCTCAGC...ACTGAAGCCAGTCAAAGCTTTTCTCCAATGACGTCTACATCCACCTGCAAAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382269.7
ENST00000539820.5
ENST00000617910.3
ENST00000629774.2
CDS-3UTR CAA 90 bp AAGCAAACGCCTGAAAGTGAGCCCTTAGTTTTGGAACCGGTTTGTACAAATGGATTGATATGGCCTCCCTaGGGGTTCTGCATACAAGGT +
Preference number: 5 (lower is better)
Translates to: KQTPESEPLVLEPVCTNGLIWPP*GFCIQG
Trigger: ACCTTGTATGCAGAACCCCAAGGGAGGCCATATCAA...TCCATTTGTACAAACCGGTTCCAAAACTAAGGGCTCACTTTCAGGCGTTTGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422464.5
ENST00000625793.2
CDS-3UTR CAA 90 bp TTGGTGAATCTCTGGAGGATGAGACAAGTCACTTTGCCTTGTTGGTCCTTAAGGAGTAACAGCACACACTaGATACAAGACAGAAGGGCC +
Preference number: 5 (lower is better)
Translates to: LVNLWRMRQVTLPCWSLRSNSTH*IQDRRA
Trigger: GGCCCTTCTGTCTTGTATCAAGTGTGTGCTGTTACT...CCTTAAGGACCAACAAGGCAAAGTGACTTGTCTCATCCTCCAGAGATTCACCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422464.5
CDS-3UTR CAA 90 bp AATACAATGTGTGAAGCCTTGAACGTAGGAGATTTTAGATCCAGATGCTGTGAAGGGCAATCACTCCGCTaGTTGGCTCAGGAAGTTTGG +
Preference number: 5 (lower is better)
Translates to: NTMCEALNVGDFRSRCCEGQSLR*LAQEVW
Trigger: CCAAACTTCCTGAGCCAACAAGCGGAGTGATTGCCC...TTCACAGCATCTGGATCTAAAATCTCCTACGTTCAAGGCTTCACACATTGTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382269.7
ENST00000539820.5
ENST00000617910.3
ENST00000629774.2
CDS-3UTR CAA 90 bp GAGAGTAACTACGACATGGTACTAGATTTACCCGTGTTGGGAAAACAGTCGTCCCTGATAAAGCATCCGTaGGATGCTGTGATTGTTGAG +
Preference number: 5 (lower is better)
Translates to: ESNYDMVLDLPVLGKQSSLIKHP*DAVIVE
Trigger: CTCAACAATCACAGCATCCAACGGATGCTTTATCAG...GGACGACTGTTTTCCCAACACGGGTAAATCTAGTACCATGTCGTAGTTACTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR CAA 90 bp GGTACTAGATTTACCCGTGTTGGGAAAACAGTCGTCCTGCTGATTTCGGATTTGCTGATAAAGCATCCGTaGGATGCTGTGATTGTTGAG +
Preference number: 5 (lower is better)
Translates to: GTRFTRVGKTVVLLISDLLIKHP*DAVIVE
Trigger: CTCAACAATCACAGCATCCAACGGATGCTTTATCAG...CAAATCCGAAATCAGCAGGACGACTGTTTTCCCAACACGGGTAAATCTAGTACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR CAA 90 bp GAAAGTGAGCCCTTAGTTTTGGAACCGGTTTGTACAAATGGAAGGCATCTTCATGTGATGGGCCTGTATTaGTTCGCCAGGCAAGTGTTT +
Preference number: 5 (lower is better)
Translates to: ESEPLVLEPVCTNGRHLHVMGLY*FARQVF
Trigger: AAACACTTGCCTGGCGAACAAATACAGGCCCATCAC...ATGAAGATGCCTTCCATTTGTACAAACCGGTTCCAAAACTAAGGGCTCACTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422464.5
ENST00000625793.2
CDS-3UTR CAA 90 bp AGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACATGGTACTAGATGGGTGGTCTCTGTTGTaGCAAGCTCCTGTGATGGGC +
Preference number: 5 (lower is better)
Translates to: SYNIYSSMPESNYDMVLDGWSLL*QAPVMG
Trigger: GCCCATCACAGGAGCTTGCAACAACAGAGACCACCC...ATCTAGTACCATGTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR CAA 90 bp TCATCCATGCCTGAGAGTAACTACGACATGGTACTAGATTTACCCGTGTTGGGAGGGAAAACATGGGTTTaGGTTCTCACAAGTCATCTG +
Preference number: 5 (lower is better)
Translates to: SSMPESNYDMVLDLPVLGGKTWV*VLTSHL
Trigger: CAGATGACTTGTGAGAACCAAAACCCATGTTTTCCC...TCCCAACACGGGTAAATCTAGTACCATGTCGTAGTTACTCTCAGGCATGGATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR CAA 90 bp CCTGAGAGTAACTACGACATGGTACTAGATTTACCCGTGTTGGGAAAACAGTCGGGGAAAACATGGGTTTaGGTTCTCACAAGTCATCTG +
Preference number: 5 (lower is better)
Translates to: PESNYDMVLDLPVLGKQSGKTWV*VLTSHL
Trigger: CAGATGACTTGTGAGAACCAAAACCCATGTTTTCCC...CGACTGTTTTCCCAACACGGGTAAATCTAGTACCATGTCGTAGTTACTCTCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR CAA 90 bp TCATCCATGCCTGAGAGTAACTACGACATGGTACTAGATTTACCCGTGTTGGGAATGTTGTCAGGATGCTaGTACAAGTCCAGGATCTTG +
Preference number: 5 (lower is better)
Translates to: SSMPESNYDMVLDLPVLGMLSGC*YKSRIL
Trigger: CAAGATCCTGGACTTGTACAAGCATCCTGACAACAT...TCCCAACACGGGTAAATCTAGTACCATGTCGTAGTTACTCTCAGGCATGGATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000469607.3
CDS-3UTR CAA 90 bp ACGCCTGAAAGTGAGCCCTTAGTTTTGGAACCGGTTTGTACAAATGGAAGGCATATGTTGTCAGGATGCTaGTACAAGTCCAGGATCTTG +
Preference number: 5 (lower is better)
Translates to: TPESEPLVLEPVCTNGRHMLSGC*YKSRIL
Trigger: CAAGATCCTGGACTTGTACAAGCATCCTGACAACAT...ATGCCTTCCATTTGTACAAACCGGTTCCAAAACTAAGGGCTCACTTTCAGGCGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422464.5
ENST00000625793.2
CDS-3UTR CAA 90 bp TTGCCTGTGTTTGGAAAAGAGTCGTACGGTGATTTTGGGAACATGAAGCTGTTCAGCCAGACATCGATGTaGTCAGGATGCTTGTACAAG +
Preference number: 5 (lower is better)
Translates to: LPVFGKESYGDFGNMKLFSQTSM*SGCLYK
Trigger: CTTGTACAAGCATCCTGACAACATCGATGTCTGGCT...GAACAGCTTCATGTTCCCAAAATCACCGTACGACTCTTTTCCAAACACAGGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000469607.3
CDS-3UTR CAA 90 bp AAATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACATGGTACTGGTGAGGCCAGTGTaGTCACAGATGACCCGAGAC +
Preference number: 5 (lower is better)
Translates to: KCSYNIYSSMPESNYDMVLVRPV*SQMTRD
Trigger: GTCTCGGGTCATCTGTGACAACACTGGCCTCACCAG...TACCATGTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000446278.5
CDS-3UTR CAA 90 bp AGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACATGGTACTAGATGGGGAATTTGCCGACTaGGAAGGCATCCATGGGCAC +
Preference number: 5 (lower is better)
Translates to: SYNIYSSMPESNYDMVLDGEFAD*EGIHGH
Trigger: GTGCCCATGGATGCCTTCCAAGTCGGCAAATTCCCC...ATCTAGTACCATGTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000446278.5
ENST00000469607.3
CDS-3UTR CAA 90 bp AGGCCAGACAAATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACAAGTCTTCGGGGAATTaGCCGACTTGGAAGGCATCC +
Preference number: 5 (lower is better)
Translates to: RPDKCSYNIYSSMPESNYKSSGN*PTWKAS
Trigger: GGATGCCTTCCAAGTCGGCAAATTCCCCGAAGACTT...GTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATTTGTCTGGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR CAA 90 bp AAAGCCCCAGAAGGAACAAATCAGGCAATGTTTACAAGAAAAGGCCAGACAAATGCCACACTTGTCGTCTaGAGGAAAGGTTTCCCTCCA +
Preference number: 5 (lower is better)
Translates to: KAPEGTNQAMFTRKGQTNATLVV*RKGFPP
Trigger: TGGAGGGAAACCTTTCCTCAAGACGACAAGTGTGGC...ATTTGTCTGGCCTTTTCTTGTAAACATTGCCTGATTTGTTCCTTCTGGGGCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR CAA 90 bp GAGAGTAACTACGACATGGTACTAGATTTACCCGTGTTGGGAAAACAGTCGTCCCTGCTGATTTCGGATTaGCCTGTGTTTGGAAAAGAG +
Preference number: 5 (lower is better)
Translates to: ESNYDMVLDLPVLGKQSSLLISD*PVFGKE
Trigger: CTCTTTTCCAAACACAGGCAAATCCGAAATCAGCAG...GGACGACTGTTTTCCCAACACGGGTAAATCTAGTACCATGTCGTAGTTACTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000469607.3
CDS-3UTR CAA 90 bp GGTACTAGATTTACCCGTGTTGGGAAAACAGTCGTCCTGCTGATTTCGGATTTGCTGCTGATTTCGGATTaGCCTGTGTTTGGAAAAGAG +
Preference number: 5 (lower is better)
Translates to: GTRFTRVGKTVVLLISDLLLISD*PVFGKE
Trigger: CTCTTTTCCAAACACAGGCAAATCCGAAATCAGCAG...CAAATCCGAAATCAGCAGGACGACTGTTTTCCCAACACGGGTAAATCTAGTACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000469607.3
CDS-3UTR CAA 90 bp GGCCAGACAAATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGCTAGATTTACCCGTGTaGGGAAAACAGTCGTCCTGC +
Preference number: 5 (lower is better)
Translates to: GQTNAAITFIHPCLRVTTLDLPV*GKQSSC
Trigger: GCAGGACGACTGTTTTCCCAACACGGGTAAATCTAG...CGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATTTGTCTGGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000446278.5
CDS-3UTR CAA 90 bp GATTTGCCTGTGTTTGGAAAAGAGTCGTACGGTGATTTTGGGAACATGAAGCTGCAGATGTGTCTGAGTTaGCTTTCAATGCCGAAGGAC +
Preference number: 5 (lower is better)
Translates to: DLPVFGKESYGDFGNMKLQMCLS*LSMPKD
Trigger: GTCCTTCGGCATTGAAAGCAAACTCAGACACATCTG...CAGCTTCATGTTCCCAAAATCACCGTACGACTCTTTTCCAAACACAGGCAAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329066.9
ENST00000422464.5
CDS-3UTR CAA 90 bp GCTTCAGTTTCGCATTATTTGGTCTGTCCTGCTGGAAGGTTCCTAGTTAAACAGTCAGTTTCGCATTATTaGGTCTGTCCTGCTGGAAGG +
Preference number: 5 (lower is better)
Translates to: ASVSHYLVCPAGRFLVKQSVSHY*VCPAGR
Trigger: CCTTCCAGCAGGACAGACCAAATAATGCGAAACTGA...CTGTTTAACTAGGAACCTTCCAGCAGGACAGACCAAATAATGCGAAACTGAAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382269.7
ENST00000539820.5
ENST00000617910.3
ENST00000629774.2
CDS-3UTR CAA 90 bp GGCTTTGCAGGTGGATGTAGACGTCATTGGAGAAAAGCTTTGACTGGCTTCAGTGCCCTGGTCTTGAGGTaGTTAAAATGTAAACTTAGG +
Preference number: 5 (lower is better)
Translates to: GFAGGCRRHWRKALTGFSALVLR*LKCKLR
Trigger: CCTAAGTTTACATTTTAACAACCTCAAGACCAGGGC...ACTGAAGCCAGTCAAAGCTTTTCTCCAATGACGTCTACATCCACCTGCAAAGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382269.7
ENST00000539820.5
ENST00000617910.3
ENST00000629774.2
CDS-3UTR CAA 90 bp AAATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACATGGTAGGGCAATCACTCCGCTaGTTGGCTCAGGAAGTTTGG +
Preference number: 5 (lower is better)
Translates to: KCSYNIYSSMPESNYDMVGQSLR*LAQEVW
Trigger: CCAAACTTCCTGAGCCAACAAGCGGAGTGATTGCCC...TACCATGTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR CAA 90 bp AAAGCCCCAGAAGGAACAAATCAGGCAATGTTTACAAGAAAAGGCCAGACAAATTCCAAGGTGCTGGAATaGGACAGCACAAAGAGCCTT +
Preference number: 5 (lower is better)
Translates to: KAPEGTNQAMFTRKGQTNSKVLE*DSTKSL
Trigger: AAGGCTCTTTGTGCTGTCCAATTCCAGCACCTTGGA...ATTTGTCTGGCCTTTTCTTGTAAACATTGCCTGATTTGTTCCTTCTGGGGCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000422464.5
CDS-3UTR CAA 90 bp TTTGGAAAAGAGTCGTACGGTGATTTTGGGAACATGAAGCTGTTCTGCAGTGTCATGTTGTCAGGATGCTaGTACAAGTCCAGGATCTTG +
Preference number: 5 (lower is better)
Translates to: FGKESYGDFGNMKLFCSVMLSGC*YKSRIL
Trigger: CAAGATCCTGGACTTGTACAAGCATCCTGACAACAT...GACACTGCAGAACAGCTTCATGTTCCCAAAATCACCGTACGACTCTTTTCCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000469607.3
CDS-3UTR CAA 90 bp GGCCAGACAAATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGAGCCAGACATCGATGTaGTCAGGATGCTTGTACAAG +
Preference number: 5 (lower is better)
Translates to: GQTNAAITFIHPCLRVTTSQTSM*SGCLYK
Trigger: CTTGTACAAGCATCCTGACAACATCGATGTCTGGCT...CGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATTTGTCTGGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000446278.5
CDS-3UTR CAA 90 bp TGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACATGGTACTAAAGTCTTCGGGGAATTaGCCGACTTGGAAGGCATCC +
Preference number: 5 (lower is better)
Translates to: CSYNIYSSMPESNYDMVLKSSGN*PTWKAS
Trigger: GGATGCCTTCCAAGTCGGCAAATTCCCCGAAGACTT...TAGTACCATGTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000446278.5
ENST00000469607.3
CDS-3UTR CAA 90 bp CAGACAAATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACAAAGTCTTCGGGGAATTaGCCGACTTGGAAGGCATCC +
Preference number: 5 (lower is better)
Translates to: QTNAAITFIHPCLRVTTTKSSGN*PTWKAS
Trigger: GGATGCCTTCCAAGTCGGCAAATTCCCCGAAGACTT...TGTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATTTGTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000446278.5
CDS-3UTR CAA 90 bp ACAAATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACATGGCACTCGTTCACATCTTaGCAGAGGGGAGGCTGGAAA +
Preference number: 5 (lower is better)
Translates to: TNAAITFIHPCLRVTTTWHSFTS*QRGGWK
Trigger: TTTCCAGCCTCCCCTCTGCAAAGATGTGAACGAGTG...CCATGTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000382201.7
ENST00000446278.5
CDS-3UTR CAA 90 bp GTGTTTGGAAAAGAGTCGTACGGTGATTTTGGGAACATGAAGCTGTTCTGCAGTCTGCTGATTTCGGATTaGCCTGTGTTTGGAAAAGAG +
Preference number: 5 (lower is better)
Translates to: VFGKESYGDFGNMKLFCSLLISD*PVFGKE
Trigger: CTCTTTTCCAAACACAGGCAAATCCGAAATCAGCAG...ACTGCAGAACAGCTTCATGTTCCCAAAATCACCGTACGACTCTTTTCCAAACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000469607.3
CDS-3UTR CAA 90 bp GAATCAGGAAGCATCAAACCAAAGAAAGGTTCAGGCTCTACTGCAGGACCCAGGTATTTCATTTTTCTGTaGTTGCAAGCTCCTGTGATG +
Preference number: 5 (lower is better)
Translates to: ESGSIKPKKGSGSTAGPRYFIFL*LQAPVM
Trigger: CATCACAGGAGCTTGCAACAACAGAAAAATGAAATA...CCTGGGTCCTGCAGTAGAGCCTGAACCTTTCTTTGGTTTGATGCTTCCTGATTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000382269.7
ENST00000539820.5
ENST00000617910.3
ENST00000629774.2
CDS-3UTR CAA 90 bp AAAGCCCCAGAAGGAACAAATCAGGCAATGTTTACAAGAAAAGGCCAGACAAATCAATCACTCCGCTTGTaGGCTCAGGAAGTTTGGAAA +
Preference number: 5 (lower is better)
Translates to: KAPEGTNQAMFTRKGQTNQSLRL*AQEVWK
Trigger: TTTCCAAACTTCCTGAGCCAACAAGCGGAGTGATTG...ATTTGTCTGGCCTTTTCTTGTAAACATTGCCTGATTTGTTCCTTCTGGGGCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR CAA 90 bp GAAAGTGAGCCCTTAGTTTTGGAACCGGTTTGTACAAATGGAAGGCATCTTCATCTGATAAAGCATCCGTaGGATGCTGTGATTGTTGAG +
Preference number: 5 (lower is better)
Translates to: ESEPLVLEPVCTNGRHLHLIKHP*DAVIVE
Trigger: CTCAACAATCACAGCATCCAACGGATGCTTTATCAG...ATGAAGATGCCTTCCATTTGTACAAACCGGTTCCAAAACTAAGGGCTCACTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422464.5
ENST00000625793.2
CDS-3UTR CAA 90 bp GACAAATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACATGGTGATGGGCCTGTATTaGTTCGCCAGGCAAGTGTTT +
Preference number: 5 (lower is better)
Translates to: DKCSYNIYSSMPESNYDMVMGLY*FARQVF
Trigger: AAACACTTGCCTGGCGAACAAATACAGGCCCATCAC...CATGTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATTTGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR CAA 90 bp ACAAATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACATGGTCCAAGGTGCTGGAATaGGACAGCACAAAGAGCCTT +
Preference number: 5 (lower is better)
Translates to: TNAAITFIHPCLRVTTTWSKVLE*DSTKSL
Trigger: AAGGCTCTTTGTGCTGTCCAATTCCAGCACCTTGGA...CCATGTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000422464.5
CDS-3UTR CAA 90 bp AGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACATGGTACTAGATGCCACACTTGTCGTCTaGAGGAAAGGTTTCCCTCCA +
Preference number: 5 (lower is better)
Translates to: SYNIYSSMPESNYDMVLDATLVV*RKGFPP
Trigger: TGGAGGGAAACCTTTCCTCAAGACGACAAGTGTGGC...ATCTAGTACCATGTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000446278.5
ENST00000469607.3
CDS-3UTR CAA 90 bp AGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACATGGTACTAGATCACTCGTTCACATCTTaGCAGAGGGGAGGCTGGAAA +
Preference number: 5 (lower is better)
Translates to: SYNIYSSMPESNYDMVLDHSFTS*QRGGWK
Trigger: TTTCCAGCCTCCCCTCTGCAAAGATGTGAACGAGTG...ATCTAGTACCATGTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000382201.7
ENST00000446278.5
CDS-3UTR CAA 90 bp TGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACATGGTACTACGGATTTGCCTGTGTTaGGAAAAGAGTCGTACGGTG +
Preference number: 5 (lower is better)
Translates to: CSYNIYSSMPESNYDMVLRICLC*EKSRTV
Trigger: CACCGTACGACTCTTTTCCAAACACAGGCAAATCCG...TAGTACCATGTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000446278.5
ENST00000469607.3
CDS-3UTR CAA 90 bp ACAAATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACATGGCGGATTTGCCTGTGTTaGGAAAAGAGTCGTACGGTG +
Preference number: 5 (lower is better)
Translates to: TNAAITFIHPCLRVTTTWRICLC*EKSRTV
Trigger: CACCGTACGACTCTTTTCCAAACACAGGCAAATCCG...CCATGTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000446278.5
CDS-3UTR CAA 90 bp CAGACAAATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACACGGATTTGCCTGTGTTaGGAAAAGAGTCGTACGGTG +
Preference number: 5 (lower is better)
Translates to: QTNAAITFIHPCLRVTTTRICLC*EKSRTV
Trigger: CACCGTACGACTCTTTTCCAAACACAGGCAAATCCG...TGTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATTTGTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000446278.5
CDS-3UTR CAA 90 bp GACAAATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACATGCTAGATTTACCCGTGTaGGGAAAACAGTCGTCCTGC +
Preference number: 5 (lower is better)
Translates to: DKCSYNIYSSMPESNYDMLDLPV*GKQSSC
Trigger: GCAGGACGACTGTTTTCCCAACACGGGTAAATCTAG...CATGTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATTTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000446278.5
CDS-3UTR CAA 90 bp AAATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACATGGTAGATGAGCCATCCTTCTaGCTTGTCATGCTGGAGGGA +
Preference number: 5 (lower is better)
Translates to: KCSYNIYSSMPESNYDMVDEPSF*LVMLEG
Trigger: TCCCTCCAGCATGACAAGCAAGAAGGATGGCTCATC...TACCATGTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422464.5
CDS-3UTR CAA 90 bp AATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACATGGTACCAATCACTCCGCTTGTaGGCTCAGGAAGTTTGGAAA +
Preference number: 5 (lower is better)
Translates to: NAAITFIHPCLRVTTTWYQSLRL*AQEVWK
Trigger: TTTCCAAACTTCCTGAGCCAACAAGCGGAGTGATTG...GTACCATGTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR CAA 90 bp AAAGCCCCAGAAGGAACAAATCAGGCAATGTTTACAAGAAAAGGCCAGACAAATGGGAAAACATGGGTTTaGGTTCTCACAAGTCATCTG +
Preference number: 5 (lower is better)
Translates to: KAPEGTNQAMFTRKGQTNGKTWV*VLTSHL
Trigger: CAGATGACTTGTGAGAACCAAAACCCATGTTTTCCC...ATTTGTCTGGCCTTTTCTTGTAAACATTGCCTGATTTGTTCCTTCTGGGGCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR CAA 90 bp AAAGCCCCAGAAGGAACAAATCAGGCAATGTTTACAAGAAAAGGCCAGACAAATATGTTGTCAGGATGCTaGTACAAGTCCAGGATCTTG +
Preference number: 5 (lower is better)
Translates to: KAPEGTNQAMFTRKGQTNMLSGC*YKSRIL
Trigger: CAAGATCCTGGACTTGTACAAGCATCCTGACAACAT...ATTTGTCTGGCCTTTTCTTGTAAACATTGCCTGATTTGTTCCTTCTGGGGCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR CAA 90 bp CAGACAAATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACAAGCCAGACATCGATGTaGTCAGGATGCTTGTACAAG +
Preference number: 5 (lower is better)
Translates to: QTNAAITFIHPCLRVTTTSQTSM*SGCLYK
Trigger: CTTGTACAAGCATCCTGACAACATCGATGTCTGGCT...TGTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATTTGTCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000446278.5
CDS-3UTR CAA 90 bp GACAAATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACATGAGCCAGACATCGATGTaGTCAGGATGCTTGTACAAG +
Preference number: 5 (lower is better)
Translates to: DKCSYNIYSSMPESNYDMSQTSM*SGCLYK
Trigger: CTTGTACAAGCATCCTGACAACATCGATGTCTGGCT...CATGTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATTTGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000446278.5
CDS-3UTR CAA 90 bp AAAGCCCCAGAAGGAACAAATCAGGCAATGTTTACAAGAAAAGGCCAGACAAATCTGCTGATTTCGGATTaGCCTGTGTTTGGAAAAGAG +
Preference number: 5 (lower is better)
Translates to: KAPEGTNQAMFTRKGQTNLLISD*PVFGKE
Trigger: CTCTTTTCCAAACACAGGCAAATCCGAAATCAGCAG...ATTTGTCTGGCCTTTTCTTGTAAACATTGCCTGATTTGTTCCTTCTGGGGCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR CAA 90 bp TGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACATGGTACTAACAAGTCACTTTGCCTaGTTGGTCCTTAAGGCTCCA +
Preference number: 5 (lower is better)
Translates to: CSYNIYSSMPESNYDMVLTSHFA*LVLKAP
Trigger: TGGAGCCTTAAGGACCAACAAGGCAAAGTGACTTGT...TAGTACCATGTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329066.9
ENST00000422464.5
CDS-3UTR CAA 90 bp TGGAGAAAAGCTTTGACTGGCTTCAGTTTCGCATTATTTGGTCTGTCCTGCTGGTATTTCATTTTTCTGTaGTTGCAAGCTCCTGTGATG +
Preference number: 5 (lower is better)
Translates to: WRKALTGFSFALFGLSCWYFIFL*LQAPVM
Trigger: CATCACAGGAGCTTGCAACAACAGAAAAATGAAATA...CCAGCAGGACAGACCAAATAATGCGAAACTGAAGCCAGTCAAAGCTTTTCTCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000382269.7
ENST00000539820.5
ENST00000617910.3
ENST00000629774.2
CDS CCA 90 bp TATTTGGTCTGTCCTGCTGGAAGGTTCCTAGTTAAACAGGTTAGTTaGCAGTTTCGGAATGGTCGGGCTTATATTTCATTTTTCTGTTGT +
Preference number: 5 (lower is better)
Translates to: YLVCPAGRFLVKQVS*QFRNGRAYISFFCC
Trigger: ACAACAGAAAAATGAAATATAAGCCCGACCATTCCGAAACTGCCAACTAACCTGTTTAACTAGGAACCTTCCAGCAGGACAGACCAAATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000382269.7
ENST00000539820.5
ENST00000617910.3
ENST00000629774.2
CDS-3UTR CAA 90 bp GACAAATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACATGCTGATAAAGCATCCGTaGGATGCTGTGATTGTTGAG +
Preference number: 5 (lower is better)
Translates to: DKCSYNIYSSMPESNYDMLIKHP*DAVIVE
Trigger: CTCAACAATCACAGCATCCAACGGATGCTTTATCAG...CATGTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATTTGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR CAA 90 bp AATACAATGTGTGAAGCCTTGAACGTAGGAGATTTTAGATCCAGATGCTGTGAACTGATAAAGCATCCGTaGGATGCTGTGATTGTTGAG +
Preference number: 5 (lower is better)
Translates to: NTMCEALNVGDFRSRCCELIKHP*DAVIVE
Trigger: CTCAACAATCACAGCATCCAACGGATGCTTTATCAG...TTCACAGCATCTGGATCTAAAATCTCCTACGTTCAAGGCTTCACACATTGTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382269.7
ENST00000539820.5
ENST00000617910.3
ENST00000629774.2
CDS-3UTR CAA 90 bp ATGTGTGAAGCCTTGAACGTAGGAGATTTTAGATCCAGATGCTGTGAATTCTTACTGATAAAGCATCCGTaGGATGCTGTGATTGTTGAG +
Preference number: 5 (lower is better)
Translates to: MCEALNVGDFRSRCCEFLLIKHP*DAVIVE
Trigger: CTCAACAATCACAGCATCCAACGGATGCTTTATCAG...TAAGAATTCACAGCATCTGGATCTAAAATCTCCTACGTTCAAGGCTTCACACAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382269.7
ENST00000539820.5
ENST00000617910.3
ENST00000629774.2
CDS-3UTR CAA 90 bp CAGACAAATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACAGGGAAAACATGGGTTTaGGTTCTCACAAGTCATCTG +
Preference number: 5 (lower is better)
Translates to: QTNAAITFIHPCLRVTTTGKTWV*VLTSHL
Trigger: CAGATGACTTGTGAGAACCAAAACCCATGTTTTCCC...TGTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATTTGTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR CAA 90 bp AGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACATGGTACTAGATAGCCAGACATCGATGTaGTCAGGATGCTTGTACAAG +
Preference number: 5 (lower is better)
Translates to: SYNIYSSMPESNYDMVLDSQTSM*SGCLYK
Trigger: CTTGTACAAGCATCCTGACAACATCGATGTCTGGCT...ATCTAGTACCATGTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000446278.5
ENST00000469607.3
CDS-3UTR CAA 90 bp ACAAATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACATGGCTGCTGATTTCGGATTaGCCTGTGTTTGGAAAAGAG +
Preference number: 5 (lower is better)
Translates to: TNAAITFIHPCLRVTTTWLLISD*PVFGKE
Trigger: CTCTTTTCCAAACACAGGCAAATCCGAAATCAGCAG...CCATGTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000446278.5
CDS-3UTR CAA 90 bp AATACAATGTGTGAAGCCTTGAACGTAGGAGATTTTAGATCCAGATGCTGTGAATTCATTTTTCTGTTGTaGCAAGCTCCTGTGATGGGC +
Preference number: 5 (lower is better)
Translates to: NTMCEALNVGDFRSRCCEFIFLL*QAPVMG
Trigger: GCCCATCACAGGAGCTTGCAACAACAGAAAAATGAA...TTCACAGCATCTGGATCTAAAATCTCCTACGTTCAAGGCTTCACACATTGTATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000382269.7
ENST00000539820.5
ENST00000617910.3
ENST00000629774.2
CDS-3UTR CAA 90 bp AGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACATGGTACTAGATCTGATAAAGCATCCGTaGGATGCTGTGATTGTTGAG +
Preference number: 5 (lower is better)
Translates to: SYNIYSSMPESNYDMVLDLIKHP*DAVIVE
Trigger: CTCAACAATCACAGCATCCAACGGATGCTTTATCAG...ATCTAGTACCATGTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
CDS-3UTR CAA 90 bp AAATGCAGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACATGGTAATGTTGTCAGGATGCTaGTACAAGTCCAGGATCTTG +
Preference number: 5 (lower is better)
Translates to: KCSYNIYSSMPESNYDMVMLSGC*YKSRIL
Trigger: CAAGATCCTGGACTTGTACAAGCATCCTGACAACAT...TACCATGTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCTGCATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000446278.5
CDS-3UTR CAA 90 bp AGCTATAACATTTATTCATCCATGCCTGAGAGTAACTACGACATGGTACTAGATATGTTGTCAGGATGCTaGTACAAGTCCAGGATCTTG +
Preference number: 5 (lower is better)
Translates to: SYNIYSSMPESNYDMVLDMLSGC*YKSRIL
Trigger: CAAGATCCTGGACTTGTACAAGCATCCTGACAACAT...ATCTAGTACCATGTCGTAGTTACTCTCAGGCATGGATGAATAAATGTTATAGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000446278.5
ENST00000469607.3
CDS-3UTR CAA 90 bp ATGTGTGAAGCCTTGAACGTAGGAGATTTTAGATCCAGATGCTGTGAATTCTTAACAATGTGTGAAGCCTaGAACGTAGGAGATTTTAGA +
Preference number: 5 (lower is better)
Translates to: MCEALNVGDFRSRCCEFLTMCEA*NVGDFR
Trigger: TCTAAAATCTCCTACGTTCAAGGCTTCACACATTGT...TAAGAATTCACAGCATCTGGATCTAAAATCTCCTACGTTCAAGGCTTCACACAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382269.7
ENST00000539820.5
ENST00000617910.3
ENST00000629774.2
CDS CCA 72 bp GATGCCGGGCTCGGGCGCACAGGCCGCAGGCGCGCGTaGCGGCACGAAGGGCAGGTAGGCGCGGCCGGAGTC +
Preference number: 6 (lower is better)
Translates to: DAGLGRTGRRRA*RHEGQVGAAGV
Trigger: GACTCCGGCCGCGCCTACCTGCCCTTCGTGCCGCCACGCGCGCCTGCGGCCTGTGCGCCCGAGCCCGGCATC
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000613631.2
ENST00000622050.4
ENST00000625793.2
ENST00000627010.2
ENST00000627917.2
CDS GCA 72 bp TTGCGCGCCTCCTGGTACACGGCGTCCGCGCTCCAGTaGGCATTGAGGGCCTTGAGCGCCGCGGCCAGGCGG +
Preference number: 6 (lower is better)
Translates to: LRASWYTASALQ*ALRALSAAARR
Trigger: CCGCCTGGCCGCGGCGCTCAAGGCCCTCAATGCGCACTGGAGCGCGGACGCCGTGTACCAGGAGGCGCGCAA
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000613631.2
ENST00000622050.4
ENST00000625793.2
ENST00000627010.2
ENST00000627917.2
CDS CCA 72 bp GGAGGCGCGCGTGGACGCGGAGCAGCCCTTCGGCACTaGTCCAGTTCCGCAGCTGCCTCTCTAGGGCCGGGG +
Preference number: 6 (lower is better)
Translates to: GGARGRGAALRH*SSSAAASLGPG
Trigger: CCCCGGCCCTAGAGAGGCAGCTGCGGAACTGGACCAGTGCCGAAGGGCTGCTCCGCGTCCACGCGCGCCTCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000613631.2
ENST00000622050.4
ENST00000625793.2
ENST00000627010.2
ENST00000627917.2
CDS CCA 72 bp GCCACAGCCCGGGCAGGTCGGGGTGCTCCTGGAAGCTaGCGTCCAGCCTCCTCACCAGCGGGTGGATCGTGG +
Preference number: 6 (lower is better)
Translates to: ATARAGRGAPGS*RPASSPAGGSW
Trigger: CCACGATCCACCCGCTGGTGAGGAGGCTGGACGCCAGCTTCCAGGAGCACCCCGACCTGCCCGGGCTGTGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 20 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382198.5
ENST00000382201.7
ENST00000422464.5
ENST00000446278.5
ENST00000462973.5
ENST00000469607.3
ENST00000497517.6
ENST00000613631.2
ENST00000622050.4
ENST00000625313.2
ENST00000625793.2
ENST00000626753.2
ENST00000626995.2
ENST00000627010.2
ENST00000627917.2
ENST00000630089.2
ENST00000630235.2
CDS CAA 72 bp TACACGGCGTCCGCGCTCCAGTGCGCATTGAGGGCCTaGAGCGCCGCGGCCAGGCGGTTGTGCTCGCGCAGC +
Preference number: 6 (lower is better)
Translates to: YTASALQCALRA*SAAARRLCSRS
Trigger: GCTGCGCGAGCACAACCGCCTGGCCGCGGCGCTCAAGGCCCTCAATGCGCACTGGAGCGCGGACGCCGTGTA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000613631.2
ENST00000622050.4
ENST00000625793.2
ENST00000627010.2
ENST00000627917.2
CDS CAA 72 bp GCCTCCTGGTACACGGCGTCCGCGCTCCAGTGCGCATaGAGGGCCTTGAGCGCCGCGGCCAGGCGGTTGTGC +
Preference number: 6 (lower is better)
Translates to: ASWYTASALQCA*RALSAAARRLC
Trigger: GCACAACCGCCTGGCCGCGGCGCTCAAGGCCCTCAATGCGCACTGGAGCGCGGACGCCGTGTACCAGGAGGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000613631.2
ENST00000622050.4
ENST00000625793.2
ENST00000627010.2
ENST00000627917.2
CDS GCA 72 bp GCTGCGGCCCGCTGCGGTGAGGTCCCTACGGCCTGGTaGTTTCCGCATCTCAGCTCGGGAGTTCCTCCGCCT +
Preference number: 6 (lower is better)
Translates to: AAARCGEVPTAW*FPHLSSGVPPP
Trigger: AGGCGGAGGAACTCCCGAGCTGAGATGCGGAAAGCACCAGGCCGTAGGGACCTCACCGCAGCGGGCCGCAGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 16 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382198.5
ENST00000382201.7
ENST00000422464.5
ENST00000425083.3
ENST00000469607.3
ENST00000613631.2
ENST00000622050.4
ENST00000625313.2
ENST00000625793.2
ENST00000626995.2
ENST00000627010.2
ENST00000627917.2
ENST00000628333.2
CDS TCA 72 bp CTCCTGCTCCGAGTCCTGAGCTGCGGCCCGCTGCGGTaGGGTCCCTACGGCCTGGTGCTTTCCGCATCTCAG +
Preference number: 6 (lower is better)
Translates to: LLLRVLSCGPLR*GPYGLVLSASQ
Trigger: CTGAGATGCGGAAAGCACCAGGCCGTAGGGACCTCACCGCAGCGGGCCGCAGCTCAGGACTCGGAGCAGGAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382198.5
ENST00000382201.7
ENST00000425083.3
ENST00000469607.3
ENST00000613631.2
ENST00000622050.4
CDS TCA 72 bp CACCTGCTCCGAGTCCTGAGCTGCGGCCCGCTGCGGTaGGGTCCCTACGGCCTGGTGCTTTCCGCATCTCAG +
Preference number: 6 (lower is better)
Translates to: HLLRVLSCGPLR*GPYGLVLSASQ
Trigger: CTGAGATGCGGAAAGCACCAGGCCGTAGGGACCTCACCGCAGCGGGCCGCAGCTCAGGACTCGGAGCAGGTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422464.5
ENST00000625793.2
CDS GCA 72 bp TGGACAGGTTCCCAAAGAGCGCGCCTTGGTCCCCGGTaGCGCAGGCGGCCGAAGAGCGGTAGAAGGGCAGAC +
Preference number: 6 (lower is better)
Translates to: WTGSQRARLGPR*RRRPKSGRRAD
Trigger: GTCTGCCCTTCTACCGCTCTTCGGCCGCCTGCGGCACCGGGGACCAAGGCGCGCTCTTTGGGAACCTGTCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000613631.2
ENST00000622050.4
ENST00000625793.2
ENST00000627010.2
ENST00000627917.2
CDS GCA 72 bp CGGAGCAGCCCTTCGGCACTGGTCCAGTTCCGCAGCTaGCTCTCTAGGGCCGGGGAGCTGCCATACACGGTG +
Preference number: 6 (lower is better)
Translates to: RSSPSALVQFRS*LSRAGELPYTV
Trigger: CACCGTGTATGGCAGCTCCCCGGCCCTAGAGAGGCAGCTGCGGAACTGGACCAGTGCCGAAGGGCTGCTCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000613631.2
ENST00000622050.4
ENST00000625793.2
ENST00000627010.2
ENST00000627917.2
CDS CCA 72 bp ATCTGGTGCAGAGCGCCCACGACCTTGCGCGCCTCCTaGTACACGGCGTCCGCGCTCCAGTGCGCATTGAGG +
Preference number: 6 (lower is better)
Translates to: IWCRAPTTLRAS*YTASALQCALR
Trigger: CCTCAATGCGCACTGGAGCGCGGACGCCGTGTACCAGGAGGCGCGCAAGGTCGTGGGCGCTCTGCACCAGAT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000613631.2
ENST00000622050.4
ENST00000625793.2
ENST00000627010.2
ENST00000627917.2
CDS CAA 72 bp CTCAGGGTGATGATCTGGTGCAGAGCGCCCACGACCTaGCGCGCCTCCTGGTACACGGCGTCCGCGCTCCAG +
Preference number: 6 (lower is better)
Translates to: LRVMIWCRAPTT*RASWYTASALQ
Trigger: CTGGAGCGCGGACGCCGTGTACCAGGAGGCGCGCAAGGTCGTGGGCGCTCTGCACCAGATCATCACCCTGAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000613631.2
ENST00000622050.4
ENST00000625793.2
ENST00000627010.2
ENST00000627917.2
CDS CAA 90 bp GACGCGTCCAGGAACGAGGTCAACCCGTTCATCTGCTGCCGCGGGTaGGCCGTGGACAGGTTCCCAAAGAGCGCGCCTTGGTCCCCGGTG +
Preference number: 6 (lower is better)
Translates to: DASRNEVNPFICCRG*AVDRFPKSAPWSPV
Trigger: CACCGGGGACCAAGGCGCGCTCTTTGGGAACCTGTCCACGGCCAACCCGCGGCAGCAGATGAACGGGTTGACCTCGTTCCTGGACGCGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000613631.2
ENST00000622050.4
ENST00000625793.2
ENST00000627010.2
ENST00000627917.2
CDS CCA 72 bp CCAGCCTCGGGGCTGACTGAAGCCGTCCTCATAGACTaGAGGGAGCCATCGTGCCAGGGCCGTGTTGGAGGC +
Preference number: 6 (lower is better)
Translates to: PASGLTEAVLID*REPSCQGRVGG
Trigger: GCCTCCAACACGGCCCTGGCACGATGGCTCCCTCCAGTCTATGAGGACGGCTTCAGTCAGCCCCGAGGCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382198.5
ENST00000382201.7
ENST00000422464.5
ENST00000613631.2
ENST00000622050.4
ENST00000625313.2
ENST00000625793.2
ENST00000627010.2
ENST00000627917.2
CDS CCA 72 bp AGGTCAACCCGTTCATCTGCTGCCGCGGGTTGGCCGTaGACAGGTTCCCAAAGAGCGCGCCTTGGTCCCCGG +
Preference number: 6 (lower is better)
Translates to: RSTRSSAAAGWP*TGSQRARLGPR
Trigger: CCGGGGACCAAGGCGCGCTCTTTGGGAACCTGTCCACGGCCAACCCGCGGCAGCAGATGAACGGGTTGACCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000613631.2
ENST00000622050.4
ENST00000625793.2
ENST00000627010.2
ENST00000627917.2
CDS CCA 72 bp GCGTCCAGCCTCCTCACCAGCGGGTGGATCGTGGCATaGCCGAAGCGGAAGGCGGCTGTGGAGAACACGTTG +
Preference number: 6 (lower is better)
Translates to: ASSLLTSGWIVA*PKRKAAVENTL
Trigger: CAACGTGTTCTCCACAGCCGCCTTCCGCTTCGGCCATGCCACGATCCACCCGCTGGTGAGGAGGCTGGACGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 20 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382198.5
ENST00000382201.7
ENST00000422464.5
ENST00000446278.5
ENST00000462973.5
ENST00000469607.3
ENST00000497517.6
ENST00000613631.2
ENST00000622050.4
ENST00000625313.2
ENST00000625793.2
ENST00000626753.2
ENST00000626995.2
ENST00000627010.2
ENST00000627917.2
ENST00000630089.2
ENST00000630235.2
CDS CCA 72 bp AGCTGGCGTCCAGCCTCCTCACCAGCGGGTGGATCGTaGCATGGCCGAAGCGGAAGGCGGCTGTGGAGAACA +
Preference number: 6 (lower is better)
Translates to: SWRPASSPAGGS*HGRSGRRLWRT
Trigger: TGTTCTCCACAGCCGCCTTCCGCTTCGGCCATGCCACGATCCACCCGCTGGTGAGGAGGCTGGACGCCAGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 20 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382198.5
ENST00000382201.7
ENST00000422464.5
ENST00000446278.5
ENST00000462973.5
ENST00000469607.3
ENST00000497517.6
ENST00000613631.2
ENST00000622050.4
ENST00000625313.2
ENST00000625793.2
ENST00000626753.2
ENST00000626995.2
ENST00000627010.2
ENST00000627917.2
ENST00000630089.2
ENST00000630235.2
CDS CCA 72 bp AGTCCAGGATCTTGTCGGCCACGCTCCTGCTGGCGATaGCTGTGCTCAGGTCAGCGGGGGTCTCCAGGCGAG +
Preference number: 6 (lower is better)
Translates to: SPGSCRPRSCWR*LCSGQRGSPGE
Trigger: CTCGCCTGGAGACCCCCGCTGACCTGAGCACAGCCATCGCCAGCAGGAGCGTGGCCGACAAGATCCTGGACT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 20 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382198.5
ENST00000382201.7
ENST00000422464.5
ENST00000446278.5
ENST00000462973.5
ENST00000469607.3
ENST00000497517.6
ENST00000613631.2
ENST00000622050.4
ENST00000625313.2
ENST00000625793.2
ENST00000626753.2
ENST00000626995.2
ENST00000627010.2
ENST00000627917.2
ENST00000630089.2
ENST00000630235.2
CDS TCA 72 bp GCCGCCAAGGTGCTGACTGACGGAGCCCTTTCTGAGTaGAGGGCCCGGTGTCTCACGGTGAGGCTGGGGTCA +
Preference number: 6 (lower is better)
Translates to: AAKVLTDGALSE*RARCLTVRLGS
Trigger: TGACCCCAGCCTCACCGTGAGACACCGGGCCCTTCACTCAGAAAGGGCTCCGTCAGTCAGCACCTTGGCGGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000497517.6
ENST00000630089.2
ENST00000650224.1
CDS GCA 72 bp TCCAGTTCCGCAGCTGCCTCTCTAGGGCCGGGGAGCTaGCATACACGGTGGACGCGTCCAGGAACGAGGTCA +
Preference number: 6 (lower is better)
Translates to: SSSAAASLGPGS*HTRWTRPGTRS
Trigger: TGACCTCGTTCCTGGACGCGTCCACCGTGTATGGCAGCTCCCCGGCCCTAGAGAGGCAGCTGCGGAACTGGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000613631.2
ENST00000622050.4
ENST00000625793.2
ENST00000627010.2
ENST00000627917.2
CDS GCA 72 bp CAAGTGAGCTGCTCCCGGCCTTGGAGCTCATACCCGTaGCGGCAGGAATACACCAGCACGCGCCTCCCAGAC +
Preference number: 6 (lower is better)
Translates to: QVSCSRPWSSYP*RQEYTSTRLPD
Trigger: GTCTGGGAGGCGCGTGCTGGTGTATTCCTGCCGGCACGGGTATGAGCTCCAAGGCCGGGAGCAGCTCACTTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 16 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382198.5
ENST00000382201.7
ENST00000422464.5
ENST00000446278.5
ENST00000469607.3
ENST00000613631.2
ENST00000622050.4
ENST00000625313.2
ENST00000625793.2
ENST00000626753.2
ENST00000626995.2
ENST00000627010.2
ENST00000627917.2
CDS GCA 72 bp GCCCACGGGTCTCTGCGGCTCTTCCGCCTCTGCTATTaGAGGCAGAGTGACTGCACGTGCCCACCCACTCAC +
Preference number: 6 (lower is better)
Translates to: AHGSLRLFRLCY*RQSDCTCPPTH
Trigger: GTGAGTGGGTGGGCACGTGCAGTCACTCTGCCTGCAATAGCAGAGGCGGAAGAGCCGCAGAGACCCGTGGGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650224.1
CDS CCA 72 bp GGTGGATCGTGGCATGGCCGAAGCGGAAGGCGGCTGTaGAGAACACGTTGGACACAGTGGGGTTGGCGGTGG +
Preference number: 6 (lower is better)
Translates to: GGSWHGRSGRRL*RTRWTQWGWRW
Trigger: CCACCGCCAACCCCACTGTGTCCAACGTGTTCTCCACAGCCGCCTTCCGCTTCGGCCATGCCACGATCCACC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 20 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382198.5
ENST00000382201.7
ENST00000422464.5
ENST00000446278.5
ENST00000462973.5
ENST00000469607.3
ENST00000497517.6
ENST00000613631.2
ENST00000622050.4
ENST00000625313.2
ENST00000625793.2
ENST00000626753.2
ENST00000626995.2
ENST00000627010.2
ENST00000627917.2
ENST00000630089.2
ENST00000630235.2
CDS CCA 72 bp TCCAACCACTGCGGTGGCAGCTGGAAACATGCGGCATaGTGTGGCCCACCTGCTCCGAGTCCTGAGCTGCGG +
Preference number: 6 (lower is better)
Translates to: SNHCGGSWKHAA*CGPPAPSPELR
Trigger: CCGCAGCTCAGGACTCGGAGCAGGTGGGCCACACCATGCCGCATGTTTCCAGCTGCCACCGCAGTGGTTGGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422464.5
ENST00000625793.2
CDS TCA 72 bp GGGGAGGCTGGAAATCCCATCCTTCCTGGGTGCAAGTaGGCTGCTCCCGGCCTTGGAGCTCATACCCGTGCC +
Preference number: 6 (lower is better)
Translates to: GEAGNPILPGCK*AAPGLGAHTRA
Trigger: GGCACGGGTATGAGCTCCAAGGCCGGGAGCAGCTCACTTGCACCCAGGAAGGATGGGATTTCCAGCCTCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382198.5
ENST00000382201.7
ENST00000422464.5
ENST00000446278.5
ENST00000469607.3
ENST00000613631.2
ENST00000622050.4
ENST00000625313.2
ENST00000625793.2
ENST00000626753.2
ENST00000626995.2
ENST00000627010.2
ENST00000627917.2
CDS TCA 72 bp CTGCCACTTTGCCCTCAGAGGGCTCTCGGCAGCCTGTaGGTATCCCGGCCTTCCATCCCAGCACTCTCCACC +
Preference number: 6 (lower is better)
Translates to: LPLCPQRALGSL*VSRPSIPALST
Trigger: GGTGGAGAGTGCTGGGATGGAAGGCCGGGATACTCACAGGCTGCCGAGAGCCCTCTGAGGGCAAAGTGGCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000446278.5
ENST00000479902.1
ENST00000497517.6
CDS TCA 72 bp ATCAGGTGGACGGTGGGTAGTGGGCCGCCAAGGTGCTaGCTGACGGAGCCCTTTCTGAGTGAAGGGCCCGGT +
Preference number: 6 (lower is better)
Translates to: IRWTVGSGPPRC*LTEPFLSEGPG
Trigger: ACCGGGCCCTTCACTCAGAAAGGGCTCCGTCAGTCAGCACCTTGGCGGCCCACTACCCACCGTCCACCTGAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497517.6
ENST00000630089.2
CDS TCA 72 bp AACAGGTGGACGGTGGGTAGTGGGCCGCCAAGGTGCTaGCTGACGGAGCCCTTTCTGAGTGAAGGGCCCGGT +
Preference number: 6 (lower is better)
Translates to: NRWTVGSGPPRC*LTEPFLSEGPG
Trigger: ACCGGGCCCTTCACTCAGAAAGGGCTCCGTCAGTCAGCACCTTGGCGGCCCACTACCCACCGTCCACCTGTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650224.1
CDS GCA 72 bp GACGCGTCCAGGAACGAGGTCAACCCGTTCATCTGCTaGCGCGGGTTGGCCGTGGACAGGTTCCCAAAGAGC +
Preference number: 6 (lower is better)
Translates to: DASRNEVNPFIC*RGLAVDRFPKS
Trigger: GCTCTTTGGGAACCTGTCCACGGCCAACCCGCGGCAGCAGATGAACGGGTTGACCTCGTTCCTGGACGCGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000613631.2
ENST00000622050.4
ENST00000625793.2
ENST00000627010.2
ENST00000627917.2
CDS GCA 72 bp GTGGACGCGTCCAGGAACGAGGTCAACCCGTTCATCTaGTGCCGCGGGTTGGCCGTGGACAGGTTCCCAAAG +
Preference number: 6 (lower is better)
Translates to: VDASRNEVNPFI*CRGLAVDRFPK
Trigger: CTTTGGGAACCTGTCCACGGCCAACCCGCGGCAGCAGATGAACGGGTTGACCTCGTTCCTGGACGCGTCCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000613631.2
ENST00000622050.4
ENST00000625793.2
ENST00000627010.2
ENST00000627917.2
CDS GCA 72 bp GGCTGGAAATCCCATCCTTCCTGGGTGCAAGTGAGCTaGTCCCGGCCTTGGAGCTCATACCCGTGCCGGCAG +
Preference number: 6 (lower is better)
Translates to: GWKSHPSWVQVS*SRPWSSYPCRQ
Trigger: CTGCCGGCACGGGTATGAGCTCCAAGGCCGGGAGCAGCTCACTTGCACCCAGGAAGGATGGGATTTCCAGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 16 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382198.5
ENST00000382201.7
ENST00000422464.5
ENST00000446278.5
ENST00000469607.3
ENST00000613631.2
ENST00000622050.4
ENST00000625313.2
ENST00000625793.2
ENST00000626753.2
ENST00000626995.2
ENST00000627010.2
ENST00000627917.2
CDS CCA 72 bp CATAGACTGGAGGGAGCCATCGTGCCAGGGCCGTGTTaGAGGCGCCCCATCTGGGGTGGTCTCTGTTGTTGC +
Preference number: 6 (lower is better)
Translates to: HRLEGAIVPGPC*RRPIWGGLCCC
Trigger: GCAACAACAGAGACCACCCCAGATGGGGCGCCTCCAACACGGCCCTGGCACGATGGCTCCCTCCAGTCTATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382198.5
ENST00000382201.7
ENST00000422464.5
ENST00000613631.2
ENST00000622050.4
ENST00000625313.2
ENST00000625793.2
ENST00000627010.2
ENST00000627917.2
CDS CCA 72 bp GGAACGAGGTCAACCCGTTCATCTGCTGCCGCGGGTTaGCCGTGGACAGGTTCCCAAAGAGCGCGCCTTGGT +
Preference number: 6 (lower is better)
Translates to: GTRSTRSSAAAG*PWTGSQRARLG
Trigger: ACCAAGGCGCGCTCTTTGGGAACCTGTCCACGGCCAACCCGCGGCAGCAGATGAACGGGTTGACCTCGTTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000613631.2
ENST00000622050.4
ENST00000625793.2
ENST00000627010.2
ENST00000627917.2
CDS CCA 72 bp GCTGCCTCTCTAGGGCCGGGGAGCTGCCATACACGGTaGACGCGTCCAGGAACGAGGTCAACCCGTTCATCT +
Preference number: 6 (lower is better)
Translates to: AASLGPGSCHTR*TRPGTRSTRSS
Trigger: AGATGAACGGGTTGACCTCGTTCCTGGACGCGTCCACCGTGTATGGCAGCTCCCCGGCCCTAGAGAGGCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000613631.2
ENST00000622050.4
ENST00000625793.2
ENST00000627010.2
ENST00000627917.2
CDS CCA 72 bp CTGCGAAGCCTCCGATCAGCAGAGCAGCCAGCGACATaGAGATCCAAGTCACCCGAGGGAGCCTCCCGGAGT +
Preference number: 6 (lower is better)
Translates to: LRSLRSAEQPAT*RSKSPEGASRS
Trigger: ACTCCGGGAGGCTCCCTCGGGTGACTTGGATCTCCATGTCGCTGGCTGCTCTGCTGATCGGAGGCTTCGCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 24 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382198.5
ENST00000382201.7
ENST00000422464.5
ENST00000425083.3
ENST00000446278.5
ENST00000462973.5
ENST00000469607.3
ENST00000479902.1
ENST00000497517.6
ENST00000613631.2
ENST00000622050.4
ENST00000625313.2
ENST00000625793.2
ENST00000626753.2
ENST00000626995.2
ENST00000627010.2
ENST00000627917.2
ENST00000628333.2
ENST00000629421.1
ENST00000630089.2
ENST00000630235.2
CDS CCA 72 bp CTGCTCCGACACCCAGATCCTGTCCAACCACTGCGGTaGCAGCTGGAAACATGCGGCATGGTGTGGCCCACC +
Preference number: 6 (lower is better)
Translates to: LLRHPDPVQPLR*QLETCGMVWPT
Trigger: GGTGGGCCACACCATGCCGCATGTTTCCAGCTGCCACCGCAGTGGTTGGACAGGATCTGGGTGTCGGAGCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422464.5
ENST00000625793.2
CDS CAA 72 bp AGGAACGAGGTCAACCCGTTCATCTGCTGCCGCGGGTaGGCCGTGGACAGGTTCCCAAAGAGCGCGCCTTGG +
Preference number: 6 (lower is better)
Translates to: RNEVNPFICCRG*AVDRFPKSAPW
Trigger: CCAAGGCGCGCTCTTTGGGAACCTGTCCACGGCCAACCCGCGGCAGCAGATGAACGGGTTGACCTCGTTCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382201.7
ENST00000422464.5
ENST00000613631.2
ENST00000622050.4
ENST00000625793.2
ENST00000627010.2
ENST00000627917.2
CDS CAA 90 bp CTGGAAATCCCATCCTTCCTGGGTGCAAGTGAGCTGCTCCCGGCCTaGGAGCTCATACCCGTGCCGGCAGGAATACACCAGCACGCGCCT +
Preference number: 6 (lower is better)
Translates to: LEIPSFLGASELLPA*ELIPVPAGIHQHAP
Trigger: AGGCGCGTGCTGGTGTATTCCTGCCGGCACGGGTATGAGCTCCAAGGCCGGGAGCAGCTCACTTGCACCCAGGAAGGATGGGATTTCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 16 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382198.5
ENST00000382201.7
ENST00000422464.5
ENST00000446278.5
ENST00000469607.3
ENST00000613631.2
ENST00000622050.4
ENST00000625313.2
ENST00000625793.2
ENST00000626753.2
ENST00000626995.2
ENST00000627010.2
ENST00000627917.2
CDS GCA 72 bp GCTTGTACAAGTCCAGGATCTTGTCGGCCACGCTCCTaGTGGCGATGGCTGTGCTCAGGTCAGCGGGGGTCT +
Preference number: 6 (lower is better)
Translates to: ACTSPGSCRPRS*WRWLCSGQRGS
Trigger: AGACCCCCGCTGACCTGAGCACAGCCATCGCCAGCAGGAGCGTGGCCGACAAGATCCTGGACTTGTACAAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 20 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382198.5
ENST00000382201.7
ENST00000422464.5
ENST00000446278.5
ENST00000462973.5
ENST00000469607.3
ENST00000497517.6
ENST00000613631.2
ENST00000622050.4
ENST00000625313.2
ENST00000625793.2
ENST00000626753.2
ENST00000626995.2
ENST00000627010.2
ENST00000627917.2
ENST00000630089.2
ENST00000630235.2
CDS GCA 72 bp CAGAGCTGCTCCGACACCCAGATCCTGTCCAACCACTaGGGTGGCAGCTGGAAACATGCGGCATGGTGTGGC +
Preference number: 6 (lower is better)
Translates to: QSCSDTQILSNH*GGSWKHAAWCG
Trigger: GCCACACCATGCCGCATGTTTCCAGCTGCCACCGCAGTGGTTGGACAGGATCTGGGTGTCGGAGCAGCTCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422464.5
ENST00000625793.2
CDS CCA 72 bp TGTACAAGTCCAGGATCTTGTCGGCCACGCTCCTGCTaGCGATGGCTGTGCTCAGGTCAGCGGGGGTCTCCA +
Preference number: 6 (lower is better)
Translates to: CTSPGSCRPRSC*RWLCSGQRGSP
Trigger: TGGAGACCCCCGCTGACCTGAGCACAGCCATCGCCAGCAGGAGCGTGGCCGACAAGATCCTGGACTTGTACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 20 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382198.5
ENST00000382201.7
ENST00000422464.5
ENST00000446278.5
ENST00000462973.5
ENST00000469607.3
ENST00000497517.6
ENST00000613631.2
ENST00000622050.4
ENST00000625313.2
ENST00000625793.2
ENST00000626753.2
ENST00000626995.2
ENST00000627010.2
ENST00000627917.2
ENST00000630089.2
ENST00000630235.2
CDS CCA 72 bp CATCCTTCCTGGGTGCAAGTGAGCTGCTCCCGGCCTTaGAGCTCATACCCGTGCCGGCAGGAATACACCAGC +
Preference number: 6 (lower is better)
Translates to: HPSWVQVSCSRP*SSYPCRQEYTS
Trigger: GCTGGTGTATTCCTGCCGGCACGGGTATGAGCTCCAAGGCCGGGAGCAGCTCACTTGCACCCAGGAAGGATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 16 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382198.5
ENST00000382201.7
ENST00000422464.5
ENST00000446278.5
ENST00000469607.3
ENST00000613631.2
ENST00000622050.4
ENST00000625313.2
ENST00000625793.2
ENST00000626753.2
ENST00000626995.2
ENST00000627010.2
ENST00000627917.2
CDS CAA 72 bp CCATCCTTCCTGGGTGCAAGTGAGCTGCTCCCGGCCTaGGAGCTCATACCCGTGCCGGCAGGAATACACCAG +
Preference number: 6 (lower is better)
Translates to: PSFLGASELLPA*ELIPVPAGIHQ
Trigger: CTGGTGTATTCCTGCCGGCACGGGTATGAGCTCCAAGGCCGGGAGCAGCTCACTTGCACCCAGGAAGGATGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 16 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382198.5
ENST00000382201.7
ENST00000422464.5
ENST00000446278.5
ENST00000469607.3
ENST00000613631.2
ENST00000622050.4
ENST00000625313.2
ENST00000625793.2
ENST00000626753.2
ENST00000626995.2
ENST00000627010.2
ENST00000627917.2
CDS TCA 72 bp TGTACAAGAAGCCGGGGTTCCAGCCTCGGGGCTGACTaGAGCCGTCCTCATAGACTGGAGGGAGCCATCGTG +
Preference number: 6 (lower is better)
Translates to: CTRSRGSSLGAD*SRPHRLEGAIV
Trigger: CACGATGGCTCCCTCCAGTCTATGAGGACGGCTTCAGTCAGCCCCGAGGCTGGAACCCCGGCTTCTTGTACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382198.5
ENST00000382201.7
ENST00000422464.5
ENST00000613631.2
ENST00000622050.4
ENST00000625313.2
ENST00000625793.2
ENST00000627010.2
ENST00000627917.2
CDS TCA 72 bp GGTCCAAACCACCTCCACGGAGTAATGTCCATGGGCTaGAGAAAGCCTGGTGCAGCCACAGCCCGGGCAGGT +
Preference number: 6 (lower is better)
Translates to: GPNHLHGVMSMG*RKPGAATARAG
Trigger: ACCTGCCCGGGCTGTGGCTGCACCAGGCTTTCTTCAGCCCATGGACATTACTCCGTGGAGGTGGTTTGGACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382198.5
ENST00000422464.5
ENST00000613631.2
ENST00000622050.4
ENST00000625313.2
ENST00000625793.2
ENST00000627010.2
CDS TCA 72 bp TGCCAGTGCGTGTCCACCTGCAAATCACCGTCGAGGTaGGACCTGCGAAGCCTCCGATCAGCAGAGCAGCCA +
Preference number: 6 (lower is better)
Translates to: CQCVSTCKSPSR*DLRSLRSAEQP
Trigger: TGGCTGCTCTGCTGATCGGAGGCTTCGCAGGTCTCACCTCGACGGTGATTTGCAGGTGGACACGCACTGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 16 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382198.5
ENST00000382201.7
ENST00000422464.5
ENST00000425083.3
ENST00000469607.3
ENST00000613631.2
ENST00000622050.4
ENST00000625313.2
ENST00000625793.2
ENST00000626995.2
ENST00000627010.2
ENST00000627917.2
ENST00000628333.2
CDS TCA 72 bp TCTGCGGCTCTTCCGCCTCTGCTATTGCAGGCAGAGTaGCTGCACGTGCCCACCCACTCACAGGAGCACATG +
Preference number: 6 (lower is better)
Translates to: SAALPPLLLQAE*LHVPTHSQEHM
Trigger: CATGTGCTCCTGTGAGTGGGTGGGCACGTGCAGTCACTCTGCCTGCAATAGCAGAGGCGGAAGAGCCGCAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650224.1
CDS GCA 72 bp TCCCGGAGTCAGTCACCGTCCCGCAGAGCCTTCATCTaGTTCCCAATGAGACAGGCAAACAGGGGCCCTGTC +
Preference number: 6 (lower is better)
Translates to: SRSQSPSRRAFI*FPMRQANRGPV
Trigger: GACAGGGCCCCTGTTTGCCTGTCTCATTGGGAAGCAGATGAAGGCTCTGCGGGACGGTGACTGACTCCGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462973.5
ENST00000630235.2
CDS GCA 72 bp CGGCTCTTCCGCCTCTGCTATTGCAGGCAGAGTGACTaGACGTGCCCACCCACTCACAGGAGCACATGGCTT +
Preference number: 6 (lower is better)
Translates to: RLFRLCYCRQSD*TCPPTHRSTWL
Trigger: AAGCCATGTGCTCCTGTGAGTGGGTGGGCACGTGCAGTCACTCTGCCTGCAATAGCAGAGGCGGAAGAGCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650224.1
CDS TCA 72 bp ATCCCAGCACTCTCCACCTGCAAATCACCGTCGAGGTaGGACCTGCGAAGCCTCCGATCAGCAGAGCAGCCA +
Preference number: 6 (lower is better)
Translates to: IPALSTCKSPSR*DLRSLRSAEQP
Trigger: TGGCTGCTCTGCTGATCGGAGGCTTCGCAGGTCTCACCTCGACGGTGATTTGCAGGTGGAGAGTGCTGGGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000446278.5
ENST00000479902.1
ENST00000497517.6
CDS CCA 72 bp AGCGGAAGGCGGCTGTGGAGAACACGTTGGACACAGTaGGGTTGGCGGTGGAGTCATAGCCTTCATAGGGAC +
Preference number: 6 (lower is better)
Translates to: SGRRLWRTRWTQ*GWRWSHSLHRD
Trigger: GTCCCTATGAAGGCTATGACTCCACCGCCAACCCCACTGTGTCCAACGTGTTCTCCACAGCCGCCTTCCGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382198.5
ENST00000382201.7
ENST00000422464.5
ENST00000497517.6
ENST00000613631.2
ENST00000622050.4
ENST00000625313.2
ENST00000625793.2
ENST00000627010.2
ENST00000627917.2
ENST00000630089.2
CDS CCA 72 bp TTCTCCAGCTCACGCCTCTGTGCATCCGTGAAGACGTaGCTGTTCTCCCACCAAAACCAGTCACCGTCCCGC +
Preference number: 6 (lower is better)
Translates to: FSSSRLCASVKT*LFSHQNQSPSR
Trigger: GCGGGACGGTGACTGGTTTTGGTGGGAGAACAGCCACGTCTTCACGGATGCACAGAGGCGTGAGCTGGAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382198.5
ENST00000382201.7
ENST00000422464.5
ENST00000446278.5
ENST00000469607.3
ENST00000613631.2
ENST00000622050.4
ENST00000625313.2
ENST00000625793.2
ENST00000626753.2
ENST00000626995.2
ENST00000627010.2
ENST00000627917.2
CDS CCA 72 bp TCTTTGCAGAGGGGAGGCTGGAAATCCCATCCTTCCTaGGTGCAAGTGAGCTGCTCCCGGCCTTGGAGCTCA +
Preference number: 6 (lower is better)
Translates to: SLQRGGWKSHPS*VQVSCSRPWSS
Trigger: TGAGCTCCAAGGCCGGGAGCAGCTCACTTGCACCCAGGAAGGATGGGATTTCCAGCCTCCCCTCTGCAAAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382198.5
ENST00000382201.7
ENST00000422464.5
ENST00000446278.5
ENST00000469607.3
ENST00000613631.2
ENST00000622050.4
ENST00000625313.2
ENST00000625793.2
ENST00000626753.2
ENST00000626995.2
ENST00000627010.2
ENST00000627917.2
CDS CAA 90 bp CGGCCCCTCTGCAGGTTGATGGACGCCAGATCCAAGGTGCTGGAATaGGACAGCACAAAGAGCCTTTCCGTCAGCTCCTCGTTCATCAGC +
Preference number: 6 (lower is better)
Translates to: RPLCRLMDARSKVLE*DSTKSLSVSSSFIS
Trigger: GCTGATGAACGAGGAGCTGACGGAAAGGCTCTTTGTGCTGTCCAATTCCAGCACCTTGGATCTGGCGTCCATCAACCTGCAGAGGGGCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382198.5
ENST00000422464.5
ENST00000613631.2
ENST00000622050.4
ENST00000625313.2
ENST00000625793.2
ENST00000627010.2
CDS CAA 90 bp AGCCAGACATCGATGTTGTCAGGATGCTTGTACAAGTCCAGGATCTaGTCGGCCACGCTCCTGCTGGCGATGGCTGTGCTCAGGTCAGCG +
Preference number: 6 (lower is better)
Translates to: SQTSMLSGCLYKSRI*SATLLLAMAVLRSA
Trigger: CGCTGACCTGAGCACAGCCATCGCCAGCAGGAGCGTGGCCGACAAGATCCTGGACTTGTACAAGCATCCTGACAACATCGATGTCTGGCT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 20 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382198.5
ENST00000382201.7
ENST00000422464.5
ENST00000446278.5
ENST00000462973.5
ENST00000469607.3
ENST00000497517.6
ENST00000613631.2
ENST00000622050.4
ENST00000625313.2
ENST00000625793.2
ENST00000626753.2
ENST00000626995.2
ENST00000627010.2
ENST00000627917.2
ENST00000630089.2
ENST00000630235.2
CDS TCA 72 bp CTCCCCCGAAGGCAGCTTTGCTGGTGCTCTGTGGTGTaGACGCGATGTCGTGGTCGATGTATTGTCCCCATG +
Preference number: 6 (lower is better)
Translates to: LPRRQLCWCSVV*TRCRGRCIVPM
Trigger: CATGGGGACAATACATCGACCACGACATCGCGTTCACACCACAGAGCACCAGCAAAGCTGCCTTCGGGGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382198.5
ENST00000382201.7
ENST00000422464.5
ENST00000613631.2
ENST00000622050.4
ENST00000625313.2
ENST00000625793.2
ENST00000627010.2
ENST00000627917.2
CDS TCA 72 bp GGGAGTGCTTCTCCAGCTCACGCCTCTGTGCATCCGTaGAGACGTGGCTGTTCTCCCACCAAAACCAGTCAC +
Preference number: 6 (lower is better)
Translates to: GSASPAHASVHP*RRGCSPTKTSH
Trigger: GTGACTGGTTTTGGTGGGAGAACAGCCACGTCTTCACGGATGCACAGAGGCGTGAGCTGGAGAAGCACTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382198.5
ENST00000382201.7
ENST00000422464.5
ENST00000446278.5
ENST00000469607.3
ENST00000613631.2
ENST00000622050.4
ENST00000625313.2
ENST00000625793.2
ENST00000626753.2
ENST00000626995.2
ENST00000627010.2
ENST00000627917.2
CDS TCA 72 bp CTGAGGGCTTCATCCAGAGGGAAGTGGCCACAGAGGTaGACTGCAGACTTGGCCGCCGTGACCATCTCTCTT +
Preference number: 6 (lower is better)
Translates to: LRASSRGKWPQR*TADLAAVTISL
Trigger: AAGAGAGATGGTCACGGCGGCCAAGTCTGCAGTTCACCTCTGTGGCCACTTCCCTCTGGATGAAGCCCTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650224.1
CDS GCA 72 bp CACCAAAACCAGTCACCGTCCCGCAGAGCCTTCATCTaGTTCCCAATGAGACAGGCAAACAGGGGCCCTGTC +
Preference number: 6 (lower is better)
Translates to: HQNQSPSRRAFI*FPMRQANRGPV
Trigger: GACAGGGCCCCTGTTTGCCTGTCTCATTGGGAAGCAGATGAAGGCTCTGCGGGACGGTGACTGGTTTTGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 16 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382198.5
ENST00000382201.7
ENST00000422464.5
ENST00000446278.5
ENST00000469607.3
ENST00000613631.2
ENST00000622050.4
ENST00000625313.2
ENST00000625793.2
ENST00000626753.2
ENST00000626995.2
ENST00000627010.2
ENST00000627917.2
CDS GCA 72 bp CCGAGACAGGGAGTGCTTCTCCAGCTCACGCCTCTGTaGATCCGTGAAGACGTGGCTGTTCTCCCACCAAAA +
Preference number: 6 (lower is better)
Translates to: PRQGVLLQLTPL*IREDVAVLPPK
Trigger: TTTTGGTGGGAGAACAGCCACGTCTTCACGGATGCACAGAGGCGTGAGCTGGAGAAGCACTCCCTGTCTCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 16 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382198.5
ENST00000382201.7
ENST00000422464.5
ENST00000446278.5
ENST00000469607.3
ENST00000613631.2
ENST00000622050.4
ENST00000625313.2
ENST00000625793.2
ENST00000626753.2
ENST00000626995.2
ENST00000627010.2
ENST00000627917.2
CDS GCA 72 bp AGGCCAGTGTTGTCACAGATGACCCGAGACAGGGAGTaGTTCTCCAGCTCACGCCTCTGTGCATCCGTGAAG +
Preference number: 6 (lower is better)
Translates to: RPVLSQMTRDRE*FSSSRLCASVK
Trigger: CTTCACGGATGCACAGAGGCGTGAGCTGGAGAAGCACTCCCTGTCTCGGGTCATCTGTGACAACACTGGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 16 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382198.5
ENST00000382201.7
ENST00000422464.5
ENST00000446278.5
ENST00000469607.3
ENST00000613631.2
ENST00000622050.4
ENST00000625313.2
ENST00000625793.2
ENST00000626753.2
ENST00000626995.2
ENST00000627010.2
ENST00000627917.2
CDS GCA 72 bp CGTTCACATCAGTCACCGTCCCGCAGAGCCTTCATCTaGTTCCCAATGAGACAGGCAAACAGGGGCCCTGTC +
Preference number: 6 (lower is better)
Translates to: RSHQSPSRRAFI*FPMRQANRGPV
Trigger: GACAGGGCCCCTGTTTGCCTGTCTCATTGGGAAGCAGATGAAGGCTCTGCGGGACGGTGACTGATGTGAACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497517.6
ENST00000630089.2
CDS TCA 72 bp ACTCATTGTAACCTCCACGGAGTAATGTCCATGGGCTaGAGAAAGCCTGGTGCAGCCACAGCCCGGGCAGGT +
Preference number: 6 (lower is better)
Translates to: THCNLHGVMSMG*RKPGAATARAG
Trigger: ACCTGCCCGGGCTGTGGCTGCACCAGGCTTTCTTCAGCCCATGGACATTACTCCGTGGAGGTTACAATGAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000382201.7
ENST00000446278.5
ENST00000462973.5
ENST00000469607.3
ENST00000497517.6
ENST00000626753.2
ENST00000626995.2
ENST00000627917.2
ENST00000630089.2
ENST00000630235.2
CDS CCA 72 bp CTGTGGAGAACACGTTGGACACAGTGGGGTTGGCGGTaGAGTCATAGCCTTCATAGGGACCCACGTACTGCT +
Preference number: 6 (lower is better)
Translates to: LWRTRWTQWGWR*SHSLHRDPRTA
Trigger: AGCAGTACGTGGGTCCCTATGAAGGCTATGACTCCACCGCCAACCCCACTGTGTCCAACGTGTTCTCCACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382198.5
ENST00000382201.7
ENST00000422464.5
ENST00000497517.6
ENST00000613631.2
ENST00000622050.4
ENST00000625313.2
ENST00000625793.2
ENST00000627010.2
ENST00000627917.2
ENST00000630089.2
CDS CAA 72 bp TCGATGTTGTCAGGATGCTTGTACAAGTCCAGGATCTaGTCGGCCACGCTCCTGCTGGCGATGGCTGTGCTC +
Preference number: 6 (lower is better)
Translates to: SMLSGCLYKSRI*SATLLLAMAVL
Trigger: GAGCACAGCCATCGCCAGCAGGAGCGTGGCCGACAAGATCCTGGACTTGTACAAGCATCCTGACAACATCGA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 20 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382198.5
ENST00000382201.7
ENST00000422464.5
ENST00000446278.5
ENST00000462973.5
ENST00000469607.3
ENST00000497517.6
ENST00000613631.2
ENST00000622050.4
ENST00000625313.2
ENST00000625793.2
ENST00000626753.2
ENST00000626995.2
ENST00000627010.2
ENST00000627917.2
ENST00000630089.2
ENST00000630235.2
CDS CAA 90 bp GCTCCTCGTTCATCAGCTGATCCTGCACCTGCAGTTTGGCTGGTCTaGCAAGAAGGCCTCGTATTAGTGGGTCCAAACCACCTCCACGGA +
Preference number: 6 (lower is better)
Translates to: APRSSADPAPAVWLV*QEGLVLVGPNHLHG
Trigger: TCCGTGGAGGTGGTTTGGACCCACTAATACGAGGCCTTCTTGCAAGACCAGCCAAACTGCAGGTGCAGGATCAGCTGATGAACGAGGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382198.5
ENST00000422464.5
ENST00000613631.2
ENST00000622050.4
ENST00000625313.2
ENST00000625793.2
ENST00000627010.2
CDS GCA 72 bp GCTAAGCCTCCCAGCCAGACATCGATGTTGTCAGGATaGTTGTACAAGTCCAGGATCTTGTCGGCCACGCTC +
Preference number: 6 (lower is better)
Translates to: AKPPSQTSMLSG*LYKSRILSATL
Trigger: GAGCGTGGCCGACAAGATCCTGGACTTGTACAAGCATCCTGACAACATCGATGTCTGGCTGGGAGGCTTAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 20 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382198.5
ENST00000382201.7
ENST00000422464.5
ENST00000446278.5
ENST00000462973.5
ENST00000469607.3
ENST00000497517.6
ENST00000613631.2
ENST00000622050.4
ENST00000625313.2
ENST00000625793.2
ENST00000626753.2
ENST00000626995.2
ENST00000627010.2
ENST00000627917.2
ENST00000630089.2
ENST00000630235.2
CDS CCA 72 bp GCTTTGCTGGTGCTCTGTGGTGTGAACGCGATGTCGTaGTCGATGTATTGTCCCCATGCCATCAGGAGGTCA +
Preference number: 6 (lower is better)
Translates to: ALLVLCGVNAMS*SMYCPHAIRRS
Trigger: TGACCTCCTGATGGCATGGGGACAATACATCGACCACGACATCGCGTTCACACCACAGAGCACCAGCAAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382198.5
ENST00000382201.7
ENST00000422464.5
ENST00000613631.2
ENST00000622050.4
ENST00000625313.2
ENST00000625793.2
ENST00000627010.2
ENST00000627917.2
CDS CCA 72 bp TCACAAGACTCAAAGTCTTCGGGGAATTTGCCGACTTaGAAGGCATCCATGGGCACCCTGGTGAGGCCAGTG +
Preference number: 6 (lower is better)
Translates to: SQDSKSSGNLPT*KASMGTLVRPV
Trigger: CACTGGCCTCACCAGGGTGCCCATGGATGCCTTCCAAGTCGGCAAATTCCCCGAAGACTTTGAGTCTTGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382198.5
ENST00000382201.7
ENST00000422464.5
ENST00000446278.5
ENST00000469607.3
ENST00000613631.2
ENST00000622050.4
ENST00000625313.2
ENST00000625793.2
ENST00000626753.2
ENST00000626995.2
ENST00000627010.2
ENST00000627917.2
CDS CAA 72 bp GCTCTGTGGTGTGAACGCGATGTCGTGGTCGATGTATaGTCCCCATGCCATCAGGAGGTCAGAATAGCGGTC +
Preference number: 6 (lower is better)
Translates to: ALWCERDVVVDV*SPCHQEVRIAV
Trigger: GACCGCTATTCTGACCTCCTGATGGCATGGGGACAATACATCGACCACGACATCGCGTTCACACCACAGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382198.5
ENST00000382201.7
ENST00000422464.5
ENST00000613631.2
ENST00000622050.4
ENST00000625313.2
ENST00000625793.2
ENST00000627010.2
ENST00000627917.2
CDS CAA 72 bp AAGCCTCCCAGCCAGACATCGATGTTGTCAGGATGCTaGTACAAGTCCAGGATCTTGTCGGCCACGCTCCTG +
Preference number: 6 (lower is better)
Translates to: KPPSQTSMLSGC*YKSRILSATLL
Trigger: CAGGAGCGTGGCCGACAAGATCCTGGACTTGTACAAGCATCCTGACAACATCGATGTCTGGCTGGGAGGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 20 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382198.5
ENST00000382201.7
ENST00000422464.5
ENST00000446278.5
ENST00000462973.5
ENST00000469607.3
ENST00000497517.6
ENST00000613631.2
ENST00000622050.4
ENST00000625313.2
ENST00000625793.2
ENST00000626753.2
ENST00000626995.2
ENST00000627010.2
ENST00000627917.2
ENST00000630089.2
ENST00000630235.2
CDS CAA 72 bp GTCACAAGACTCAAAGTCTTCGGGGAATTTGCCGACTaGGAAGGCATCCATGGGCACCCTGGTGAGGCCAGT +
Preference number: 6 (lower is better)
Translates to: VTRLKVFGEFAD*EGIHGHPGEAS
Trigger: ACTGGCCTCACCAGGGTGCCCATGGATGCCTTCCAAGTCGGCAAATTCCCCGAAGACTTTGAGTCTTGTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382198.5
ENST00000382201.7
ENST00000422464.5
ENST00000446278.5
ENST00000469607.3
ENST00000613631.2
ENST00000622050.4
ENST00000625313.2
ENST00000625793.2
ENST00000626753.2
ENST00000626995.2
ENST00000627010.2
ENST00000627917.2
CDS CAA 90 bp TTTTCAGCTAAGCCTCCCAGCCAGACATCGATGTTGTCAGGATGCTaGTACAAGTCCAGGATCTTGTCGGCCACGCTCCTGCTGGCGATG +
Preference number: 6 (lower is better)
Translates to: FSAKPPSQTSMLSGC*YKSRILSATLLLAM
Trigger: CATCGCCAGCAGGAGCGTGGCCGACAAGATCCTGGACTTGTACAAGCATCCTGACAACATCGATGTCTGGCTGGGAGGCTTAGCTGAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 20 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382198.5
ENST00000382201.7
ENST00000422464.5
ENST00000446278.5
ENST00000462973.5
ENST00000469607.3
ENST00000497517.6
ENST00000613631.2
ENST00000622050.4
ENST00000625313.2
ENST00000625793.2
ENST00000626753.2
ENST00000626995.2
ENST00000627010.2
ENST00000627917.2
ENST00000630089.2
ENST00000630235.2
CDS CAA 90 bp CTGGGGAGGAAGTTTTCAGCTAAGCCTCCCAGCCAGACATCGATGTaGTCAGGATGCTTGTACAAGTCCAGGATCTTGTCGGCCACGCTC +
Preference number: 6 (lower is better)
Translates to: LGRKFSAKPPSQTSM*SGCLYKSRILSATL
Trigger: GAGCGTGGCCGACAAGATCCTGGACTTGTACAAGCATCCTGACAACATCGATGTCTGGCTGGGAGGCTTAGCTGAAAACTTCCTCCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 20 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382198.5
ENST00000382201.7
ENST00000422464.5
ENST00000446278.5
ENST00000462973.5
ENST00000469607.3
ENST00000497517.6
ENST00000613631.2
ENST00000622050.4
ENST00000625313.2
ENST00000625793.2
ENST00000626753.2
ENST00000626995.2
ENST00000627010.2
ENST00000627917.2
ENST00000630089.2
ENST00000630235.2
CDS CAA 90 bp TTCATGCCAGTGATGCTGTCACAAGACTCAAAGTCTTCGGGGAATTaGCCGACTTGGAAGGCATCCATGGGCACCCTGGTGAGGCCAGTG +
Preference number: 6 (lower is better)
Translates to: FMPVMLSQDSKSSGN*PTWKASMGTLVRPV
Trigger: CACTGGCCTCACCAGGGTGCCCATGGATGCCTTCCAAGTCGGCAAATTCCCCGAAGACTTTGAGTCTTGTGACAGCATCACTGGCATGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382198.5
ENST00000382201.7
ENST00000422464.5
ENST00000446278.5
ENST00000469607.3
ENST00000613631.2
ENST00000622050.4
ENST00000625313.2
ENST00000625793.2
ENST00000626753.2
ENST00000626995.2
ENST00000627010.2
ENST00000627917.2
CDS TCA 72 bp AACAGCCTCCTGACCAGGGACCCATGCCATCGGGGGTaGCTTATATCAGCAAAGAGCCATCTTCTCACCAAG +
Preference number: 6 (lower is better)
Translates to: NSLLTRDPCHRG*LISAKSHLLTK
Trigger: CTTGGTGAGAAGATGGCTCTTTGCTGATATAAGTCACCCCCGATGGCATGGGTCCCTGGTCAGGAGGCTGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650224.1
CDS CAA 72 bp GTGATGCTGTCACAAGACTCAAAGTCTTCGGGGAATTaGCCGACTTGGAAGGCATCCATGGGCACCCTGGTG +
Preference number: 6 (lower is better)
Translates to: VMLSQDSKSSGN*PTWKASMGTLV
Trigger: CACCAGGGTGCCCATGGATGCCTTCCAAGTCGGCAAATTCCCCGAAGACTTTGAGTCTTGTGACAGCATCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382198.5
ENST00000382201.7
ENST00000422464.5
ENST00000446278.5
ENST00000469607.3
ENST00000613631.2
ENST00000622050.4
ENST00000625313.2
ENST00000625793.2
ENST00000626753.2
ENST00000626995.2
ENST00000627010.2
ENST00000627917.2
CDS CAA 90 bp AGTGATGCTGTCACAAGACTCAAAGTCTTCGGGGAATTTGCCGACTaGGAAGGCATCCATGGGCACCCTGGTGAGGCCAGTGTTGTCACA +
Preference number: 6 (lower is better)
Translates to: SDAVTRLKVFGEFAD*EGIHGHPGEASVVT
Trigger: TGTGACAACACTGGCCTCACCAGGGTGCCCATGGATGCCTTCCAAGTCGGCAAATTCCCCGAAGACTTTGAGTCTTGTGACAGCATCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382198.5
ENST00000382201.7
ENST00000422464.5
ENST00000446278.5
ENST00000469607.3
ENST00000613631.2
ENST00000622050.4
ENST00000625313.2
ENST00000625793.2
ENST00000626753.2
ENST00000626995.2
ENST00000627010.2
ENST00000627917.2
CDS GCA 72 bp TCCCTCACTTCTCCATCAATGTCCAGTGCCTGTGTCTaGCTCTCAACCTCCACCTTTGGCATGATCTGTGCT +
Preference number: 6 (lower is better)
Translates to: SLTSPSMSSACV*LSTSTFGMICA
Trigger: AGCACAGATCATGCCAAAGGTGGAGGTTGAGAGGCAGACACAGGCACTGGACATTGATGGAGAAGTGAGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650224.1
CDS CAA 72 bp TCTCTGTTGTTGCAAGCTCCTGTGATGGGCCTGTATTaGTTCGCCAGGCAAGTGTTTGGGCATTTTGGGGGC +
Preference number: 6 (lower is better)
Translates to: SLLLQAPVMGLY*FARQVFGHFGG
Trigger: GCCCCCAAAATGCCCAAACACTTGCCTGGCGAACAAATACAGGCCCATCACAGGAGCTTGCAACAACAGAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 14 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382198.5
ENST00000382201.7
ENST00000422464.5
ENST00000423320.5
ENST00000613631.2
ENST00000622050.4
ENST00000625313.2
ENST00000625793.2
ENST00000627010.2
ENST00000627917.2
ENST00000628844.2
CDS CAA 90 bp TTTGCTGGTGCTCTGTGGTGTGAACGCGATGTCGTGGTCGATGTATaGTCCCCATGCCATCAGGAGGTCAGAATAGCGGTCATCATCTGT +
Preference number: 6 (lower is better)
Translates to: FAGALWCERDVVVDV*SPCHQEVRIAVIIC
Trigger: ACAGATGATGACCGCTATTCTGACCTCCTGATGGCATGGGGACAATACATCGACCACGACATCGCGTTCACACCACAGAGCACCAGCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382198.5
ENST00000382201.7
ENST00000422464.5
ENST00000613631.2
ENST00000622050.4
ENST00000625313.2
ENST00000625793.2
ENST00000627010.2
ENST00000627917.2
CDS GCA 72 bp TGTGAACGCGATGTCGTGGTCGATGTATTGTCCCCATaGCATCAGGAGGTCAGAATAGCGGTCATCATCTGT +
Preference number: 6 (lower is better)
Translates to: CERDVVVDVLSP*HQEVRIAVIIC
Trigger: ACAGATGATGACCGCTATTCTGACCTCCTGATGGCATGGGGACAATACATCGACCACGACATCGCGTTCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382198.5
ENST00000382201.7
ENST00000422464.5
ENST00000613631.2
ENST00000622050.4
ENST00000625313.2
ENST00000625793.2
ENST00000627010.2
ENST00000627917.2
CDS GCA 72 bp ATTAATGAATGTACTTTTCTTGAGCCCACGGGTCTCTaGGGCTCTTCCGCCTCTGCTATTGCAGGCAGAGTG +
Preference number: 6 (lower is better)
Translates to: INECTFLEPTGL*GSSASAIAGRV
Trigger: CACTCTGCCTGCAATAGCAGAGGCGGAAGAGCCGCAGAGACCCGTGGGCTCAAGAAAAGTACATTCATTAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650224.1
CDS CAA 72 bp TTTCTGTTGTTGCAAGCTCCTGTGATGGGCCTGTATTaGTTCGCCAGGCAAGTGTTTGGGCATTTTGGGGGC +
Preference number: 6 (lower is better)
Translates to: FLLLQAPVMGLY*FARQVFGHFGG
Trigger: GCCCCCAAAATGCCCAAACACTTGCCTGGCGAACAAATACAGGCCCATCACAGGAGCTTGCAACAACAGAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000382269.7
ENST00000539820.5
ENST00000617910.3
ENST00000629774.2
CDS TCA 72 bp GCCCAAGTAGTGCTCAAGTCCCTTTCAGCTGCTCTATaGAGTGTGAAGAATCCCTGGTTCCATTCAAGAGCC +
Preference number: 6 (lower is better)
Translates to: AQVVLKSLSAAL*SVKNPWFHSRA
Trigger: GGCTCTTGAATGGAACCAGGGATTCTTCACACTTCATAGAGCAGCTGAAAGGGACTTGAGCACTACTTGGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650224.1
CDS GCA 72 bp TCAGAAGGCCCAAGTAGTGCTCAAGTCCCTTTCAGCTaGTCTATGAAGTGTGAAGAATCCCTGGTTCCATTC +
Preference number: 6 (lower is better)
Translates to: SEGPSSAQVPFS*SMKCEESLVPF
Trigger: GAATGGAACCAGGGATTCTTCACACTTCATAGAGCAGCTGAAAGGGACTTGAGCACTACTTGGGCCTTCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650224.1
CDS CAA 72 bp AAGTTTTCAGCTAAGCCTCCCAGCCAGACATCGATGTaGTCAGGATGCTTGTACAAGTCCAGGATCTTGTCG +
Preference number: 6 (lower is better)
Translates to: KFSAKPPSQTSM*SGCLYKSRILS
Trigger: CGACAAGATCCTGGACTTGTACAAGCATCCTGACAACATCGATGTCTGGCTGGGAGGCTTAGCTGAAAACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 20 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382198.5
ENST00000382201.7
ENST00000422464.5
ENST00000446278.5
ENST00000462973.5
ENST00000469607.3
ENST00000497517.6
ENST00000613631.2
ENST00000622050.4
ENST00000625313.2
ENST00000625793.2
ENST00000626753.2
ENST00000626995.2
ENST00000627010.2
ENST00000627917.2
ENST00000630089.2
ENST00000630235.2
CDS CAA 90 bp CCTCAGATTAAGTGGAAGCAAACGCCTGAAAGTGAGCCCTTAGTTTaGGAACCGGTTTGTACAAATGGAAGGCATCTTCATTCCTCTCAC +
Preference number: 6 (lower is better)
Translates to: PQIKWKQTPESEPLV*EPVCTNGRHLHSSH
Trigger: GTGAGAGGAATGAAGATGCCTTCCATTTGTACAAACCGGTTCCAAAACTAAGGGCTCACTTTCAGGCGTTTGCTTCCACTTAATCTGAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422464.5
ENST00000625793.2
CDS TCA 72 bp GTCAGAATAGCGGTCATCATCTGTGACAACCTCATTTaGAACTTGAATGACATGTCTTGTCACCTCCCGGAC +
Preference number: 6 (lower is better)
Translates to: VRIAVIICDNLI*NLNDMSCHLPD
Trigger: GTCCGGGAGGTGACAAGACATGTCATTCAAGTTTCAAATGAGGTTGTCACAGATGATGACCGCTATTCTGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000329066.9
ENST00000345913.8
ENST00000346956.7
ENST00000382198.5
ENST00000382201.7
ENST00000422464.5
ENST00000613631.2
ENST00000622050.4
ENST00000625313.2
ENST00000625793.2
ENST00000627010.2
ENST00000627917.2
CDS CAA 90 bp GCCCACCCACTCACAGGAGCACATGGCTTTAACTACACATCTTTTTaGCGTTTCAGTTTCCTCATGAATTATGCAGTAGATTCTCCTGTA +
Preference number: 6 (lower is better)
Translates to: AHPLTGAHGFNYTSF*RFSFLMNYAVDSPV
Trigger: TACAGGAGAATCTACTGCATAATTCATGAGGAAACTGAAACGCAAAAAAGATGTGTAGTTAAAGCCATGTGCTCCTGTGAGTGGGTGGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650224.1