RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TPH1 (Homo sapiens)

Ensembl gene IDs: ENSG00000129167

Ensembl transcript IDs: ENST00000250018.6, ENST00000417164.5, ENST00000525406.1, ENST00000528338.1, ENST00000682019.1

Found 175 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CTGCTGACCTTAGCAAGGGCATCACTGACAACATCGAGATCATGCTaGAGCTCATTCATGGCACTGGTTATGCTCTTGGTGTCTTTCAGG +
Preference number: 1 (lower is better)
Translates to: LLTLARASLTTSRSC*SSFMALVMLLVSFR
Trigger: CCTGAAAGACACCAAGAGCATAACCAGTGCCATGAATGAGCTGCAGCATGATCTCGATGTTGTCAGTGATGCCCTTGCTAAGGTCAGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417164.5
3UTR TCA 90 bp CACAGTGAAAAAGTAGCACGTTGCCAGTTTTTGAACAGCCTCCTCTaGAGCGCCAAGAGAAGCCAAGCCAATTTCTTGGGAGAATTGGGC +
Preference number: 1 (lower is better)
Translates to: HSEKVARCQFLNSLL*SAKRSQANFLGELG
Trigger: GCCCAATTCTCCCAAGAAATTGGCTTGGCTTCTCTTGGCGCTTCAGAGGAGGCTGTTCAAAAACTGGCAACGTGCTACTTTTTCACTGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000417164.5
3UTR GCA 90 bp TTCCTGCTGACCTTAGCAAGGGCATCACTGACAACATCGAGATCATaGTGCAGCTCATTCATGGCACTGGTTATGCTCTTGGTGTCTTTC +
Preference number: 1 (lower is better)
Translates to: FLLTLARASLTTSRS*CSSFMALVMLLVSF
Trigger: GAAAGACACCAAGAGCATAACCAGTGCCATGAATGAGCTGCAGCATGATCTCGATGTTGTCAGTGATGCCCTTGCTAAGGTCAGCAGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417164.5
3UTR TCA 90 bp TGGCAGGGCTGTCATATTGAACAACCCCTATTCATTCTATGTGGATaGTGCCACATGAAGTTGTACAGCATTGGCCTAAATTATGAGACA +
Preference number: 1 (lower is better)
Translates to: WQGCHIEQPLFILCG*CHMKLYSIGLNYET
Trigger: TGTCTCATAATTTAGGCCAATGCTGTACAACTTCATGTGGCATCATCCACATAGAATGAATAGGGGTTGTTCAATATGACAGCCCTGCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000250018.6
3UTR TCA 90 bp TTTATAGACCTGTTCAATTTGAGATGCTTGGCAGGGCTGTCATATTaGACAACCCCTATTCATTCTATGTGGATGATGCCACATGAAGTT +
Preference number: 1 (lower is better)
Translates to: FIDLFNLRCLAGLSY*TTPIHSMWMMPHEV
Trigger: AACTTCATGTGGCATCATCCACATAGAATGAATAGGGGTTGTTCAATATGACAGCCCTGCCAAGCATCTCAAATTGAACAGGTCTATAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000250018.6
3UTR-3UTR TCA 90 bp ATCACTGACAACATCGAGATCATGCTGCAGCTCATTCATGGCACTGGTTATGCTTTGAACAGCCTCCTCTaGAGCGCCAAGAGAAGCCAA +
Preference number: 2 (lower is better)
Translates to: ITDNIEIMLQLIHGTGYALNSLL*SAKRSQ
Trigger: TTGGCTTCTCTTGGCGCTTCAGAGGAGGCTGTTCAA...AGCATAACCAGTGCCATGAATGAGCTGCAGCATGATCTCGATGTTGTCAGTGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417164.5
3UTR-3UTR TCA 90 bp ATCACTGACAACATCGAGATCATGCTGCAGCTCATTCATGGCACTGGTTATGCTCACGTTGCCAGTTTTTaGACAGCCTCCTCTGAAGCG +
Preference number: 2 (lower is better)
Translates to: ITDNIEIMLQLIHGTGYAHVASF*TASSEA
Trigger: CGCTTCAGAGGAGGCTGTTCAAAAACTGGCAACGTG...AGCATAACCAGTGCCATGAATGAGCTGCAGCATGATCTCGATGTTGTCAGTGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000417164.5
3UTR-3UTR TCA 90 bp ATACTCGGCTTCCTGCTGACCTTAGCAAGGGCATCACTGACAACATCGAGATCAGACCAAACTCCACAGTaGAAAAGTAGCACGTTGCCA +
Preference number: 2 (lower is better)
Translates to: ILGFLLTLARASLTTSRSDQTPQ*KSSTLP
Trigger: TGGCAACGTGCTACTTTTTCACTGTGGAGTTTGGTC...TGATCTCGATGTTGTCAGTGATGCCCTTGCTAAGGTCAGCAGGAAGCCGAGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417164.5
3UTR-3UTR TCA 90 bp ATACTCGGCTTCCTGCTGACCTTAGCAAGGGCATCACTGACAACATCGAGATCAGTGTCTTTCAGGATCTaGATACTCCGTGTATATGGA +
Preference number: 2 (lower is better)
Translates to: ILGFLLTLARASLTTSRSVSFRI*ILRVYG
Trigger: TCCATATACACGGAGTATTCAGATCCTGAAAGACAC...TGATCTCGATGTTGTCAGTGATGCCCTTGCTAAGGTCAGCAGGAAGCCGAGTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417164.5
3UTR-3UTR TCA 90 bp AACCATTCCTTGGCAATCCTTACATTACTTACAGTCTCAGTCCTAAACCACTCTCTAGGACCACATGTCTaGGTACAGCCCCATGCAAGT +
Preference number: 2 (lower is better)
Translates to: NHSLAILTLLTVSVLNHSLGPHV*VQPHAS
Trigger: ACTTGCATGGGGCTGTACTCAGACATGTGGTCCTAG...AGAGTGGTTTAGGACTGAGACTGTAAGTAATGTAAGGATTGCCAAGGAATGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000250018.6
3UTR-3UTR TCA 90 bp AATACTCCTCAAGTTATTCTAAGCGATCCTAAAGGGTCATTTTACTCAAGGAGGCCCAGACCTCCGAATTaGTGCTCAAATGTTCCTGGA +
Preference number: 2 (lower is better)
Translates to: NTPQVILSDPKGSFYSRRPRPPN*CSNVPG
Trigger: TCCAGGAACATTTGAGCATCAATTCGGAGGTCTGGG...CCTCCTTGAGTAAAATGACCCTTTAGGATCGCTTAGAATAACTTGAGGAGTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000250018.6
3UTR-3UTR GCA 90 bp ATTGCATACCTTTCTGTTTATGGCCTCACCTTATACCTTAGAAATAAAGTACTCTGTTTGGCCAGAAGATaGTGTCCCTCCAGGATCAGG +
Preference number: 2 (lower is better)
Translates to: IAYLSVYGLTLYLRNKVLCLARR*CPSRIR
Trigger: CCTGATCCTGGAGGGACAGCATCTTCTGGCCAAACA...GAGTACTTTATTTCTAAGGTATAAGGTGAGGCCATAAACAGAAAGGTATGCAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000250018.6
3UTR-3UTR GCA 90 bp GGTAATCTTGGGATCAAAGGGCTTTACTTTGGCATGTCCAGAAAGTGCATGTTTGAAAAAGTAGCACGTTaGCAGTTTTTGAACAGCCTC +
Preference number: 2 (lower is better)
Translates to: GNLGIKGLYFGMSRKCMFEKVAR*QFLNSL
Trigger: GAGGCTGTTCAAAAACTGGCAACGTGCTACTTTTTC...AAACATGCACTTTCTGGACATGCCAAAGTAAAGCCCTTTGATCCCAAGATTACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000417164.5
3UTR-3UTR CCA 90 bp GGGCTTTACTTTGGCATGTCCAGAAAGTGCATGTTTGAGTTCACTGATAGAAGAATTTCTTGGGAGAATTaGGCAAAACTAGGTTCAGCC +
Preference number: 2 (lower is better)
Translates to: GLYFGMSRKCMFEFTDRRISWEN*AKLGSA
Trigger: GGCTGAACCTAGTTTTGCCCAATTCTCCCAAGAAAT...TCTTCTATCAGTGAACTCAAACATGCACTTTCTGGACATGCCAAAGTAAAGCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417164.5
3UTR-3UTR CCA 90 bp AACATCGAGATCATGCTGCAGCTCATTCATGGCACTGGTTATGCTCTTGGTGTCATACTTCACTCCAAATaGACGCTTAATTGTTTTGGT +
Preference number: 2 (lower is better)
Translates to: NIEIMLQLIHGTGYALGVILHSK*TLNCFG
Trigger: ACCAAAACAATTAAGCGTCCATTTGGAGTGAAGTAT...GACACCAAGAGCATAACCAGTGCCATGAATGAGCTGCAGCATGATCTCGATGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417164.5
3UTR CAA 90 bp AGACATTCCTGTTTGCAGGTAATCTTGGGATCAAAGGGCTTTACTTaGGCATGTCCAGAAAGTGCATGTTTGAGTTCACTGATAGAAGAA +
Preference number: 2 (lower is better)
Translates to: RHSCLQVILGSKGFT*ACPESACLSSLIEE
Trigger: TTCTTCTATCAGTGAACTCAAACATGCACTTTCTGGACATGCCAAAGTAAAGCCCTTTGATCCCAAGATTACCTGCAAACAGGAATGTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417164.5
3UTR-3UTR CCA 90 bp ATAACAGGACTGCTTACTCCCTGTGCTACACAGCTGACTCTGCATAAAAACCATTCTATTAAAAATGGGTaGTCAGTGGCTTGTATGGTA +
Preference number: 2 (lower is better)
Translates to: ITGLLTPCATQLTLHKNHSIKNG*SVACMV
Trigger: TACCATACAAGCCACTGACCACCCATTTTTAATAGA...ATGGTTTTTATGCAGAGTCAGCTGTGTAGCACAGGGAGTAAGCAGTCCTGTTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000250018.6
3UTR-3UTR CCA 90 bp CAATTTGAGATGCTTGGCAGGGCTGTCATATTGAACAACCCCTATTCATTCTATTTCGATAATATTGTTTaGCCAGAAGATGCTGTCCCT +
Preference number: 2 (lower is better)
Translates to: QFEMLGRAVILNNPYSFYFDNIV*PEDAVP
Trigger: AGGGACAGCATCTTCTGGCCAAACAATATTATCGAA...ATAGAATGAATAGGGGTTGTTCAATATGACAGCCCTGCCAAGCATCTCAAATTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000250018.6
3UTR-3UTR CCA 90 bp ATAACAGGACTGCTTACTCCCTGTGCTACACAGCTGACTCTGCATAAAAACCATAAAATGGGTGGTCAGTaGCTTGTATGGTATATAAAT +
Preference number: 2 (lower is better)
Translates to: ITGLLTPCATQLTLHKNHKMGGQ*LVWYIN
Trigger: ATTTATATACCATACAAGCCACTGACCACCCATTTT...ATGGTTTTTATGCAGAGTCAGCTGTGTAGCACAGGGAGTAAGCAGTCCTGTTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000250018.6
3UTR-3UTR TCA 90 bp CAATTTGAGATGCTTGGCAGGGCTGTCATATTGAACAACCCCTATTCATTCTATCATTGGCCTAAATTATaGGACATCTACATAGACATC +
Preference number: 2 (lower is better)
Translates to: QFEMLGRAVILNNPYSFYHWPKL*DIYIDI
Trigger: GATGTCTATGTAGATGTCTCATAATTTAGGCCAATG...ATAGAATGAATAGGGGTTGTTCAATATGACAGCCCTGCCAAGCATCTCAAATTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000250018.6
3UTR-3UTR CCA 90 bp CAATTTGAGATGCTTGGCAGGGCTGTCATATTGAACAACCCCTATTCATTCTATGGTCAGTGGCTTGTATaGTATATAAATTGTCTCATT +
Preference number: 2 (lower is better)
Translates to: QFEMLGRAVILNNPYSFYGQWLV*YINCLI
Trigger: AATGAGACAATTTATATACCATACAAGCCACTGACC...ATAGAATGAATAGGGGTTGTTCAATATGACAGCCCTGCCAAGCATCTCAAATTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000250018.6
3UTR-3UTR CCA 90 bp ATTGCATACCTTTCTGTTTATGGCCTCACCTTATACCTTAGAAATAAAGTACTCTGCTTCCTGTTAATCTaGGGACAATCCCATTATAAT +
Preference number: 2 (lower is better)
Translates to: IAYLSVYGLTLYLRNKVLCFLLI*GQSHYN
Trigger: ATTATAATGGGATTGTCCCCAGATTAACAGGAAGCA...GAGTACTTTATTTCTAAGGTATAAGGTGAGGCCATAAACAGAAAGGTATGCAAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000250018.6
3UTR TCA 72 bp AAAGTAGCACGTTGCCAGTTTTTGAACAGCCTCCTCTaGAGCGCCAAGAGAAGCCAAGCCAATTTCTTGGGA +
Preference number: 3 (lower is better)
Translates to: KVARCQFLNSLL*SAKRSQANFLG
Trigger: TCCCAAGAAATTGGCTTGGCTTCTCTTGGCGCTTCAGAGGAGGCTGTTCAAAAACTGGCAACGTGCTACTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000417164.5
3UTR GCA 72 bp TTAGCAAGGGCATCACTGACAACATCGAGATCATGCTaGAGCTCATTCATGGCACTGGTTATGCTCTTGGTG +
Preference number: 3 (lower is better)
Translates to: LARASLTTSRSC*SSFMALVMLLV
Trigger: CACCAAGAGCATAACCAGTGCCATGAATGAGCTGCAGCATGATCTCGATGTTGTCAGTGATGCCCTTGCTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417164.5
3UTR GCA 72 bp ACCTTAGCAAGGGCATCACTGACAACATCGAGATCATaGTGCAGCTCATTCATGGCACTGGTTATGCTCTTG +
Preference number: 3 (lower is better)
Translates to: TLARASLTTSRS*CSSFMALVMLL
Trigger: CAAGAGCATAACCAGTGCCATGAATGAGCTGCAGCATGATCTCGATGTTGTCAGTGATGCCCTTGCTAAGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417164.5
3UTR CCA 72 bp TCCTCTGAAGCGCCAAGAGAAGCCAAGCCAATTTCTTaGGAGAATTGGGCAAAACTAGGTTCAGCCAAAAGC +
Preference number: 3 (lower is better)
Translates to: SSEAPREAKPIS*ENWAKLGSAKS
Trigger: GCTTTTGGCTGAACCTAGTTTTGCCCAATTCTCCCAAGAAATTGGCTTGGCTTCTCTTGGCGCTTCAGAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417164.5
3UTR-3UTR CAA 90 bp CGAGATCATGCTGCAGCTCATTCATGGCACTGGTTATGCTCTTGGTGTCTTTCAAGCCAAGCCAATTTCTaGGGAGAATTGGGCAAAACT +
Preference number: 3 (lower is better)
Translates to: RDHAAAHSWHWLCSWCLSSQANF*GELGKT
Trigger: AGTTTTGCCCAATTCTCCCAAGAAATTGGCTTGGCT...TGAAAGACACCAAGAGCATAACCAGTGCCATGAATGAGCTGCAGCATGATCTCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417164.5
3UTR-3UTR CAA 90 bp AACATCGAGATCATGCTGCAGCTCATTCATGGCACTGGTTATGCTCTTGGTGTCAATTTCTTGGGAGAATaGGGCAAAACTAGGTTCAGC +
Preference number: 3 (lower is better)
Translates to: NIEIMLQLIHGTGYALGVNFLGE*GKTRFS
Trigger: GCTGAACCTAGTTTTGCCCAATTCTCCCAAGAAATT...GACACCAAGAGCATAACCAGTGCCATGAATGAGCTGCAGCATGATCTCGATGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417164.5
3UTR-3UTR CAA 90 bp AACATCGAGATCATGCTGCAGCTCATTCATGGCACTGGTTATGCTCTTGGTGTCTGTTTGCAGGTAATCTaGGGATCAAAGGGCTTTACT +
Preference number: 3 (lower is better)
Translates to: NIEIMLQLIHGTGYALGVCLQVI*GSKGFT
Trigger: AGTAAAGCCCTTTGATCCCAAGATTACCTGCAAACA...GACACCAAGAGCATAACCAGTGCCATGAATGAGCTGCAGCATGATCTCGATGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417164.5
3UTR CCA 72 bp CAACATCGAGATCATGCTGCAGCTCATTCATGGCACTaGTTATGCTCTTGGTGTCTTTCAGGATCTGAATAC +
Preference number: 3 (lower is better)
Translates to: QHRDHAAAHSWH*LCSWCLSGSEY
Trigger: GTATTCAGATCCTGAAAGACACCAAGAGCATAACCAGTGCCATGAATGAGCTGCAGCATGATCTCGATGTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417164.5
3UTR-3UTR CAA 90 bp GGGTCAAACAACTTCTCTATTAAAAATGGGTGGTCAGTGGCTTGTATGGTATATGCCCAGACCTCCGAATaGATGCTCAAATGTTCCTGG +
Preference number: 3 (lower is better)
Translates to: GSNNFSIKNGWSVACMVYAQTSE*MLKCSW
Trigger: CCAGGAACATTTGAGCATCAATTCGGAGGTCTGGGC...ATATACCATACAAGCCACTGACCACCCATTTTTAATAGAGAAGTTGTTTGACCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000250018.6
3UTR-3UTR CAA 90 bp CTTTATAGACCTGTTCAATTTGAGATGCTTGGCAGGGCTGTCATATTGAACAACAAGGAAGATAGTCACTaGGGAAGGGGCTCCCTAATG +
Preference number: 3 (lower is better)
Translates to: LYRPVQFEMLGRAVILNNKEDSH*GRGSLM
Trigger: CATTAGGGAGCCCCTTCCCAAGTGACTATCTTCCTT...GTTGTTCAATATGACAGCCCTGCCAAGCATCTCAAATTGAACAGGTCTATAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000250018.6
3UTR-3UTR CAA 90 bp ATAACAGGACTGCTTACTCCCTGTGCTACACAGCTGACTCTGCATAAAAACCATTTTACTCAAGGAGGATaGGGGAAAATAGAGTTAGGC +
Preference number: 3 (lower is better)
Translates to: ITGLLTPCATQLTLHKNHFTQGG*GKIELG
Trigger: GCCTAACTCTATTTTCCCCAATCCTCCTTGAGTAAA...ATGGTTTTTATGCAGAGTCAGCTGTGTAGCACAGGGAGTAAGCAGTCCTGTTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000250018.6
3UTR-3UTR CAA 90 bp ATAACAGGACTGCTTACTCCCTGTGCTACACAGCTGACTCTGCATAAAAACCATAAGGCCTCTATACTTTaGCTCATGCTAGCAACAAAG +
Preference number: 3 (lower is better)
Translates to: ITGLLTPCATQLTLHKNHKASIL*LMLATK
Trigger: CTTTGTTGCTAGCATGAGCAAAAGTATAGAGGCCTT...ATGGTTTTTATGCAGAGTCAGCTGTGTAGCACAGGGAGTAAGCAGTCCTGTTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000250018.6
3UTR-3UTR CAA 90 bp GCAGCTCATTCATGGCACTGGTTATGCTCTTGGTGTCTTTCAGGATCTGAATACCCAGAAAGTGCATGTTaGAGTTCACTGATAGAAGAA +
Preference number: 3 (lower is better)
Translates to: AAHSWHWLCSWCLSGSEYPESAC*SSLIEE
Trigger: TTCTTCTATCAGTGAACTCAAACATGCACTTTCTGG...GTATTCAGATCCTGAAAGACACCAAGAGCATAACCAGTGCCATGAATGAGCTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417164.5
3UTR TCA 72 bp CTGTTCAATTTGAGATGCTTGGCAGGGCTGTCATATTaGACAACCCCTATTCATTCTATGTGGATGATGCCA +
Preference number: 3 (lower is better)
Translates to: LFNLRCLAGLSY*TTPIHSMWMMP
Trigger: TGGCATCATCCACATAGAATGAATAGGGGTTGTTCAATATGACAGCCCTGCCAAGCATCTCAAATTGAACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000250018.6
3UTR-3UTR CAA 90 bp ATAACAGGACTGCTTACTCCCTGTGCTACACAGCTGACTCTGCATAAAAACCATTGGAATTCGATAATATaGTTTGGCCAGAAGATGCTG +
Preference number: 3 (lower is better)
Translates to: ITGLLTPCATQLTLHKNHWNSII*FGQKML
Trigger: CAGCATCTTCTGGCCAAACAATATTATCGAATTCCA...ATGGTTTTTATGCAGAGTCAGCTGTGTAGCACAGGGAGTAAGCAGTCCTGTTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000250018.6
3UTR-3UTR CAA 90 bp ATAACAGGACTGCTTACTCCCTGTGCTACACAGCTGACTCTGCATAAAAACCATTTGAAACTAGACTACTaGCTCTTTACTAGGTATCCT +
Preference number: 3 (lower is better)
Translates to: ITGLLTPCATQLTLHKNHLKLDY*LFTRYP
Trigger: AGGATACCTAGTAAAGAGCAAGTAGTCTAGTTTCAA...ATGGTTTTTATGCAGAGTCAGCTGTGTAGCACAGGGAGTAAGCAGTCCTGTTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000250018.6
3UTR TCA 72 bp TGTCATATTGAACAACCCCTATTCATTCTATGTGGATaGTGCCACATGAAGTTGTACAGCATTGGCCTAAAT +
Preference number: 3 (lower is better)
Translates to: CHIEQPLFILCG*CHMKLYSIGLN
Trigger: ATTTAGGCCAATGCTGTACAACTTCATGTGGCATCATCCACATAGAATGAATAGGGGTTGTTCAATATGACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000250018.6
3UTR CCA 72 bp GGTCAAACAACTTCTCTATTAAAAATGGGTGGTCAGTaGCTTGTATGGTATATAAATTGTCTCATTAAAGCT +
Preference number: 3 (lower is better)
Translates to: GQTTSLLKMGGQ*LVWYINCLIKA
Trigger: AGCTTTAATGAGACAATTTATATACCATACAAGCCACTGACCACCCATTTTTAATAGAGAAGTTGTTTGACC
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000250018.6
3UTR CCA 72 bp TCTATTGGGTCAAACAACTTCTCTATTAAAAATGGGTaGTCAGTGGCTTGTATGGTATATAAATTGTCTCAT +
Preference number: 3 (lower is better)
Translates to: SIGSNNFSIKNG*SVACMVYKLSH
Trigger: ATGAGACAATTTATATACCATACAAGCCACTGACCACCCATTTTTAATAGAGAAGTTGTTTGACCCAATAGA
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000250018.6
CDS-3UTR CCA 90 bp GCAAGGGCATCACTGACAACATCGAGATCATGCTGCAGCTCATTCATGGCACTGCAGCCACAGGACGGATaGAAAAACCTGTACGCTTGT +
Preference number: 4 (lower is better)
Translates to: ARASLTTSRSCCSSFMALQPQDG*KNLYAC
Trigger: ACAAGCGTACAGGTTTTTCCATCCGTCCTGTGGCTG...CAGTGCCATGAATGAGCTGCAGCATGATCTCGATGTTGTCAGTGATGCCCTTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000417164.5
CDS-3UTR TCA 90 bp CAAGCCAATTTCTTGGGAGAATTGGGCAAAACTAGGTTCAGCCAAAAGCGGGACGCCAAAAGCGGGACATaGCCTAAGAGTTCATGGCAG +
Preference number: 4 (lower is better)
Translates to: QANFLGELGKTRFSQKRDAKSGT*PKSSWQ
Trigger: CTGCCATGAACTCTTAGGTCATGTCCCGCTTTTGGC...GTCCCGCTTTTGGCTGAACCTAGTTTTGCCCAATTCTCCCAAGAAATTGGCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000417164.5
CDS-3UTR TCA 90 bp CAAGCCAATTTCTTGGGAGAATTGGGCAAAACTAGGTTCAGCCAAAAGCGGGACCACGTTGCCAGTTTTTaGACAGCCTCCTCTGAAGCG +
Preference number: 4 (lower is better)
Translates to: QANFLGELGKTRFSQKRDHVASF*TASSEA
Trigger: CGCTTCAGAGGAGGCTGTTCAAAAACTGGCAACGTG...GTCCCGCTTTTGGCTGAACCTAGTTTTGCCCAATTCTCCCAAGAAATTGGCTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000417164.5
CDS-3UTR GCA 90 bp CGGCTTCCTGCTGACCTTAGCAAGGGCATCACTGACAACATCGAGATCATGCTGACAACATCGAGATCATaGTGCAGCTCATTCATGGCA +
Preference number: 4 (lower is better)
Translates to: RLPADLSKGITDNIEIMLTTSRS*CSSFMA
Trigger: TGCCATGAATGAGCTGCAGCATGATCTCGATGTTGT...CAGCATGATCTCGATGTTGTCAGTGATGCCCTTGCTAAGGTCAGCAGGAAGCCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417164.5
CDS-3UTR TCA 90 bp AACCATTCCTTGGCAATCCTTACATTACTTACAGTCTCAGTCCTAAACCACTCTATTAGCGGGGCATGGTaGAGCACGCCTGCAGTCCCA +
Preference number: 4 (lower is better)
Translates to: NHSLAILTLLTVSVLNHSISGAW*STPAVP
Trigger: TGGGACTGCAGGCGTGCTTCACCATGCCCCGCTAAT...AGAGTGGTTTAGGACTGAGACTGTAAGTAATGTAAGGATTGCCAAGGAATGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000250018.6
CDS-3UTR GCA 90 bp ATAACAGGACTGCTTACTCCCTGTGCTACACAGCTGACTCTGCATAAAAACCATCTGAAATCACGCAACTaGGCTCCAGCCTGGGCAACA +
Preference number: 4 (lower is better)
Translates to: ITGLLTPCATQLTLHKNHLKSRN*APAWAT
Trigger: TGTTGCCCAGGCTGGAGCGCAGTTGCGTGATTTCAG...ATGGTTTTTATGCAGAGTCAGCTGTGTAGCACAGGGAGTAAGCAGTCCTGTTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000250018.6
CDS-3UTR CCA 90 bp AGCACGTTGCCAGTTTTTGAACAGCCTCCTCTGAAGCGCCAAGAGAAGCCAAGCATTTCTTGGGAGAATTaGGCAAAACTAGGTTCAGCC +
Preference number: 4 (lower is better)
Translates to: STLPVFEQPPLKRQEKPSISWEN*AKLGSA
Trigger: GGCTGAACCTAGTTTTGCCCAATTCTCCCAAGAAAT...GCTTGGCTTCTCTTGGCGCTTCAGAGGAGGCTGTTCAAAAACTGGCAACGTGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000417164.5
CDS-3UTR TCA 90 bp ATAACAGGACTGCTTACTCCCTGTGCTACACAGCTGACTCTGCATAAAAACCATCTTTTAGGGCATGACTaGAGCCTGCTGGCTTCTTGC +
Preference number: 4 (lower is better)
Translates to: ITGLLTPCATQLTLHKNHLLGHD*SLLASC
Trigger: GCAAGAAGCCAGCAGGCTTCAGTCATGCCCTAAAAG...ATGGTTTTTATGCAGAGTCAGCTGTGTAGCACAGGGAGTAAGCAGTCCTGTTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000250018.6
CDS-3UTR TCA 90 bp AACCATTCCTTGGCAATCCTTACATTACTTACAGTCTCAGTCCTAAACCACTCTAGGTGGAGCTTGCAGTaGGCCAAGATCGCACCACTG +
Preference number: 4 (lower is better)
Translates to: NHSLAILTLLTVSVLNHSRWSLQ*AKIAPL
Trigger: CAGTGGTGCGATCTTGGCTCACTGCAAGCTCCACCT...AGAGTGGTTTAGGACTGAGACTGTAAGTAATGTAAGGATTGCCAAGGAATGGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000250018.6
CDS-3UTR GCA 90 bp CAATTTGAGATGCTTGGCAGGGCTGTCATATTGAACAACCCCTATTCATTCTATCTGGGAGGTGGAGCTTaGAGTGAGCCAAGATCGCAC +
Preference number: 4 (lower is better)
Translates to: QFEMLGRAVILNNPYSFYLGGGA*SEPRSH
Trigger: GTGCGATCTTGGCTCACTGCAAGCTCCACCTCCCAG...ATAGAATGAATAGGGGTTGTTCAATATGACAGCCCTGCCAAGCATCTCAAATTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000250018.6
CDS-3UTR TCA 90 bp CTTTATAGACCTGTTCAATTTGAGATGCTTGGCAGGGCTGTCATATTGAACAACCGCTCTTTTAGGGCATaGCTGAAGCCTGCTGGCTTC +
Preference number: 4 (lower is better)
Translates to: LYRPVQFEMLGRAVILNNRSFRA*LKPAGF
Trigger: GAAGCCAGCAGGCTTCAGTCATGCCCTAAAAGAGCG...GTTGTTCAATATGACAGCCCTGCCAAGCATCTCAAATTGAACAGGTCTATAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000250018.6
CDS-3UTR TCA 90 bp GGTAATCTTGGGATCAAAGGGCTTTACTTTGGCATGTCCAGAAAGTGCATGTTTTTGAACAGCCTCCTCTaGAGCGCCAAGAGAAGCCAA +
Preference number: 4 (lower is better)
Translates to: GNLGIKGLYFGMSRKCMFLNSLL*SAKRSQ
Trigger: TTGGCTTCTCTTGGCGCTTCAGAGGAGGCTGTTCAA...AAACATGCACTTTCTGGACATGCCAAAGTAAAGCCCTTTGATCCCAAGATTACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000417164.5
CDS-3UTR TCA 90 bp ATAACAGGACTGCTTACTCCCTGTGCTACACAGCTGACTCTGCATAAAAACCATCCCAGACCTCCGAATTaGTGCTCAAATGTTCCTGGA +
Preference number: 4 (lower is better)
Translates to: ITGLLTPCATQLTLHKNHPRPPN*CSNVPG
Trigger: TCCAGGAACATTTGAGCATCAATTCGGAGGTCTGGG...ATGGTTTTTATGCAGAGTCAGCTGTGTAGCACAGGGAGTAAGCAGTCCTGTTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000250018.6
CDS-3UTR GCA 90 bp TTTGAACAGCCTCCTCTGAAGCGCCAAGAGAAGCCAAGCCAATTTCTTGGGAGAGGCATGTCCAGAAAGTaGATGTTTGAGTTCACTGAT +
Preference number: 4 (lower is better)
Translates to: FEQPPLKRQEKPSQFLGRGMSRK*MFEFTD
Trigger: ATCAGTGAACTCAAACATGCACTTTCTGGACATGCC...TCTCCCAAGAAATTGGCTTGGCTTCTCTTGGCGCTTCAGAGGAGGCTGTTCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417164.5
CDS-3UTR GCA 90 bp GGGTCAAACAACTTCTCTATTAAAAATGGGTGGTCAGTGGCTTGTATGGTATATACAGAGGCAGGAGAATaGCGTGAACCTGGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: GSNNFSIKNGWSVACMVYTEAGE*REPGRW
Trigger: CCACCTCCCAGGTTCACGGCATTCTCCTGCCTCTGT...ATATACCATACAAGCCACTGACCACCCATTTTTAATAGAGAAGTTGTTTGACCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000250018.6
CDS-3UTR CCA 90 bp ATAACAGGACTGCTTACTCCCTGTGCTACACAGCTGACTCTGCATAAAAACCATCAGCCACAGGACGGATaGAAAAACCTGTACGCTCTT +
Preference number: 4 (lower is better)
Translates to: ITGLLTPCATQLTLHKNHQPQDG*KNLYAL
Trigger: AAGAGCGTACAGGTTTTTCCATCCGTCCTGTGGCTG...ATGGTTTTTATGCAGAGTCAGCTGTGTAGCACAGGGAGTAAGCAGTCCTGTTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000250018.6
CDS-3UTR CCA 90 bp ATAACAGGACTGCTTACTCCCTGTGCTACACAGCTGACTCTGCATAAAAACCATTTCATGGCAGGTATCTaGCTCTGGGGTATAGAAGGG +
Preference number: 4 (lower is better)
Translates to: ITGLLTPCATQLTLHKNHFMAGI*LWGIEG
Trigger: CCCTTCTATACCCCAGAGCCAGATACCTGCCATGAA...ATGGTTTTTATGCAGAGTCAGCTGTGTAGCACAGGGAGTAAGCAGTCCTGTTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000250018.6
CDS-3UTR CCA 90 bp AACATCGAGATCATGCTGCAGCTCATTCATGGCACTGGTTATGCTCTTGGTGTCGCTCATTCATGGCACTaGTTATGCTCTTGGTGTCTT +
Preference number: 4 (lower is better)
Translates to: NIEIMLQLIHGTGYALGVAHSWH*LCSWCL
Trigger: AAGACACCAAGAGCATAACCAGTGCCATGAATGAGC...GACACCAAGAGCATAACCAGTGCCATGAATGAGCTGCAGCATGATCTCGATGTT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417164.5
CDS-3UTR TCA 90 bp GCGCCAAGAGAAGCCAAGCCAATTTCTTGGGAGAATTGGGCAAAACTAGGTTCAGGTATAGAAGGGATCTaGACTGTGTCTCACATATTG +
Preference number: 4 (lower is better)
Translates to: APREAKPISWENWAKLGSGIEGI*TVSHIL
Trigger: CAATATGTGAGACACAGTTCAGATCCCTTCTATACC...TGAACCTAGTTTTGCCCAATTCTCCCAAGAAATTGGCTTGGCTTCTCTTGGCGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417164.5
CDS-3UTR TCA 90 bp AGCCAGCACCAAAGACTCTTAGCTGTCCATCTTGTTTACATAGACCAAACTCCAGACCAAACTCCACAGTaGAAAAGTAGCACGTTGCCA +
Preference number: 4 (lower is better)
Translates to: SQHQRLLAVHLVYIDQTPDQTPQ*KSSTLP
Trigger: TGGCAACGTGCTACTTTTTCACTGTGGAGTTTGGTC...TGGAGTTTGGTCTATGTAAACAAGATGGACAGCTAAGAGTCTTTGGTGCTGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417164.5
CDS-3UTR TCA 90 bp CAATTTGAGATGCTTGGCAGGGCTGTCATATTGAACAACCCCTATTCATTCTATCTAGGACCACATGTCTaGGTACAGCCCCATGCAAGT +
Preference number: 4 (lower is better)
Translates to: QFEMLGRAVILNNPYSFYLGPHV*VQPHAS
Trigger: ACTTGCATGGGGCTGTACTCAGACATGTGGTCCTAG...ATAGAATGAATAGGGGTTGTTCAATATGACAGCCCTGCCAAGCATCTCAAATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000250018.6
CDS-3UTR GCA 90 bp AACCATTCCTTGGCAATCCTTACATTACTTACAGTCTCAGTCCTAAACCACTCTGGCATGACTGAAGCCTaGTGGCTTCTTGCAGTCTTC +
Preference number: 4 (lower is better)
Translates to: NHSLAILTLLTVSVLNHSGMTEA*WLLAVF
Trigger: GAAGACTGCAAGAAGCCAGCAGGCTTCAGTCATGCC...AGAGTGGTTTAGGACTGAGACTGTAAGTAATGTAAGGATTGCCAAGGAATGGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000250018.6
CDS-3UTR GCA 90 bp ATGCTGCAGCTCATTCATGGCACTGGTTATGCTCTTGGTGTCTTTCAGGATCTGGAAAAAGTAGCACGTTaGCAGTTTTTGAACAGCCTC +
Preference number: 4 (lower is better)
Translates to: MLQLIHGTGYALGVFQDLEKVAR*QFLNSL
Trigger: GAGGCTGTTCAAAAACTGGCAACGTGCTACTTTTTC...CAGATCCTGAAAGACACCAAGAGCATAACCAGTGCCATGAATGAGCTGCAGCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000417164.5
CDS-3UTR GCA 90 bp GCAGCTCATTCATGGCACTGGTTATGCTCTTGGTGTCTTTCAGGATCTGAATACTCATGGCACTGGTTATaGTCTTGGTGTCTTTCAGGA +
Preference number: 4 (lower is better)
Translates to: AAHSWHWLCSWCLSGSEYSWHWL*SWCLSG
Trigger: TCCTGAAAGACACCAAGAGCATAACCAGTGCCATGA...GTATTCAGATCCTGAAAGACACCAAGAGCATAACCAGTGCCATGAATGAGCTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417164.5
CDS-3UTR GCA 90 bp AGCCAGCACCAAAGACTCTTAGCTGTCCATCTTGTTTACATAGACCAAACTCCAACATCGAGATCATGCTaGAGCTCATTCATGGCACTG +
Preference number: 4 (lower is better)
Translates to: SQHQRLLAVHLVYIDQTPTSRSC*SSFMAL
Trigger: CAGTGCCATGAATGAGCTGCAGCATGATCTCGATGT...TGGAGTTTGGTCTATGTAAACAAGATGGACAGCTAAGAGTCTTTGGTGCTGGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417164.5
CDS-3UTR CCA 90 bp GCAAGGGCATCACTGACAACATCGAGATCATGCTGCAGCTCATTCATGGCACTGGTCAGAAATCTTCTTTaGAAACCAAGGAACAGTTTC +
Preference number: 4 (lower is better)
Translates to: ARASLTTSRSCCSSFMALVRNLL*KPRNSF
Trigger: GAAACTGTTCCTTGGTTTCCAAAGAAGATTTCTGAC...CAGTGCCATGAATGAGCTGCAGCATGATCTCGATGTTGTCAGTGATGCCCTTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417164.5
CDS-3UTR CCA 90 bp ATAACAGGACTGCTTACTCCCTGTGCTACACAGCTGACTCTGCATAAAAACCATACATCAGAACTCTGTTaGCACAATGGTCCAGGTCAG +
Preference number: 4 (lower is better)
Translates to: ITGLLTPCATQLTLHKNHTSELC*HNGPGQ
Trigger: CTGACCTGGACCATTGTGCCAACAGAGTTCTGATGT...ATGGTTTTTATGCAGAGTCAGCTGTGTAGCACAGGGAGTAAGCAGTCCTGTTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000250018.6
CDS-3UTR CCA 90 bp GGGCTTTACTTTGGCATGTCCAGAAAGTGCATGTTTGAGTTCACTGATAGAAGATTCATGGCAGGTATCTaGCTCTGGGGTATAGAAGGG +
Preference number: 4 (lower is better)
Translates to: GLYFGMSRKCMFEFTDRRFMAGI*LWGIEG
Trigger: CCCTTCTATACCCCAGAGCCAGATACCTGCCATGAA...TCTTCTATCAGTGAACTCAAACATGCACTTTCTGGACATGCCAAAGTAAAGCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417164.5
CDS-3UTR TCA 90 bp ATGCTGCAGCTCATTCATGGCACTGGTTATGCTCTTGGTGTCTTTCAGGATCTGTTCACATGCTTCTCCTaGAAGATTTTCAGGGCTTTT +
Preference number: 4 (lower is better)
Translates to: MLQLIHGTGYALGVFQDLFTCFS*KIFRAF
Trigger: AAAAGCCCTGAAAATCTTTCAGGAGAAGCATGTGAA...CAGATCCTGAAAGACACCAAGAGCATAACCAGTGCCATGAATGAGCTGCAGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417164.5
CDS-3UTR TCA 90 bp GGTAATCTTGGGATCAAAGGGCTTTACTTTGGCATGTCCAGAAAGTGCATGTTTGGTAGACATTGTCTTTaGAGCCAGGATGGTCTGCAT +
Preference number: 4 (lower is better)
Translates to: GNLGIKGLYFGMSRKCMFGRHCL*SQDGLH
Trigger: ATGCAGACCATCCTGGCTTCAAAGACAATGTCTACC...AAACATGCACTTTCTGGACATGCCAAAGTAAAGCCCTTTGATCCCAAGATTACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417164.5
CDS-3UTR TCA 90 bp AATACTCCTCAAGTTATTCTAAGCGATCCTAAAGGGTCATTTTACTCAAGGAGGTTGAACAGCCTCCTCTaGAGCGCCAAGAGAAGCCAA +
Preference number: 4 (lower is better)
Translates to: NTPQVILSDPKGSFYSRRLNSLL*SAKRSQ
Trigger: TTGGCTTCTCTTGGCGCTTCAGAGGAGGCTGTTCAA...CCTCCTTGAGTAAAATGACCCTTTAGGATCGCTTAGAATAACTTGAGGAGTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000250018.6
CDS-3UTR GCA 90 bp ATGCTGCAGCTCATTCATGGCACTGGTTATGCTCTTGGTGTCTTTCAGGATCTGGTCTCACATATTGAGTaGAGTGAAAAACTCGAAAGG +
Preference number: 4 (lower is better)
Translates to: MLQLIHGTGYALGVFQDLVSHIE*SEKLER
Trigger: CCTTTCGAGTTTTTCACTGCACTCAATATGTGAGAC...CAGATCCTGAAAGACACCAAGAGCATAACCAGTGCCATGAATGAGCTGCAGCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000417164.5
CDS-3UTR GCA 90 bp ATAACAGGACTGCTTACTCCCTGTGCTACACAGCTGACTCTGCATAAAAACCATACAACATCGAGATCATaGTGCAGCTCATTCATGGCA +
Preference number: 4 (lower is better)
Translates to: ITGLLTPCATQLTLHKNHTTSRS*CSSFMA
Trigger: TGCCATGAATGAGCTGCAGCATGATCTCGATGTTGT...ATGGTTTTTATGCAGAGTCAGCTGTGTAGCACAGGGAGTAAGCAGTCCTGTTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000250018.6
CDS-3UTR TCA 90 bp CAATTTGAGATGCTTGGCAGGGCTGTCATATTGAACAACCCCTATTCATTCTATGGTAGACATTGTCTTTaGAGCCAGGATGGTCTGCAT +
Preference number: 4 (lower is better)
Translates to: QFEMLGRAVILNNPYSFYGRHCL*SQDGLH
Trigger: ATGCAGACCATCCTGGCTTCAAAGACAATGTCTACC...ATAGAATGAATAGGGGTTGTTCAATATGACAGCCCTGCCAAGCATCTCAAATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000250018.6
CDS-3UTR TCA 90 bp TCCTGTTTGCAGGTAATCTTGGGATCAAAGGGCTTTACTTTGGCATGTCCAGAAGTGTCTTTCAGGATCTaGATACTCCGTGTATATGGA +
Preference number: 4 (lower is better)
Translates to: SCLQVILGSKGFTLACPEVSFRI*ILRVYG
Trigger: TCCATATACACGGAGTATTCAGATCCTGAAAGACAC...TTCTGGACATGCCAAAGTAAAGCCCTTTGATCCCAAGATTACCTGCAAACAGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417164.5
CDS-3UTR GCA 90 bp CTTTATAGACCTGTTCAATTTGAGATGCTTGGCAGGGCTGTCATATTGAACAACACATCGAGATCATGCTaGAGCTCATTCATGGCACTG +
Preference number: 4 (lower is better)
Translates to: LYRPVQFEMLGRAVILNNTSRSC*SSFMAL
Trigger: CAGTGCCATGAATGAGCTGCAGCATGATCTCGATGT...GTTGTTCAATATGACAGCCCTGCCAAGCATCTCAAATTGAACAGGTCTATAAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000250018.6
CDS-3UTR CCA 90 bp ATAACAGGACTGCTTACTCCCTGTGCTACACAGCTGACTCTGCATAAAAACCATTACATATGCACTAGATaGATAACTGCTAGCCAGGAG +
Preference number: 4 (lower is better)
Translates to: ITGLLTPCATQLTLHKNHYICTR*ITASQE
Trigger: CTCCTGGCTAGCAGTTATCCATCTAGTGCATATGTA...ATGGTTTTTATGCAGAGTCAGCTGTGTAGCACAGGGAGTAAGCAGTCCTGTTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000250018.6
CDS-3UTR CCA 90 bp AAGGGCTTTACTTTGGCATGTCCAGAAAGTGCATGTTTGAGTTCACTGATAGAAACATCAGAACTCTGTTaGCACAATGGTCCAGGTCAG +
Preference number: 4 (lower is better)
Translates to: KGFTLACPESACLSSLIETSELC*HNGPGQ
Trigger: CTGACCTGGACCATTGTGCCAACAGAGTTCTGATGT...TTCTATCAGTGAACTCAAACATGCACTTTCTGGACATGCCAAAGTAAAGCCCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417164.5
CDS-3UTR CCA 90 bp AACCATTCCTTGGCAATCCTTACATTACTTACAGTCTCAGTCCTAAACCACTCTTCTGCAAGCATGGGTTaGGTAGAGTTTGTTGAGCTC +
Preference number: 4 (lower is better)
Translates to: NHSLAILTLLTVSVLNHSSASMG*VEFVEL
Trigger: GAGCTCAACAAACTCTACCCAACCCATGCTTGCAGA...AGAGTGGTTTAGGACTGAGACTGTAAGTAATGTAAGGATTGCCAAGGAATGGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000250018.6
CDS-3UTR CCA 90 bp AGCCAGCACCAAAGACTCTTAGCTGTCCATCTTGTTTACATAGACCAAACTCCAGCCAAGCCAATTTCTTaGGAGAATTGGGCAAAACTA +
Preference number: 4 (lower is better)
Translates to: SQHQRLLAVHLVYIDQTPAKPIS*ENWAKL
Trigger: TAGTTTTGCCCAATTCTCCCAAGAAATTGGCTTGGC...TGGAGTTTGGTCTATGTAAACAAGATGGACAGCTAAGAGTCTTTGGTGCTGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417164.5
CDS-3UTR CCA 90 bp ATTGCATACCTTTCTGTTTATGGCCTCACCTTATACCTTAGAAATAAAGTACTCTTTGGGAGGCCGAGGTaGGCAGATCACAATGTCAGG +
Preference number: 4 (lower is better)
Translates to: IAYLSVYGLTLYLRNKVLFGRPR*ADHNVR
Trigger: CCTGACATTGTGATCTGCCCACCTCGGCCTCCCAAA...GAGTACTTTATTTCTAAGGTATAAGGTGAGGCCATAAACAGAAAGGTATGCAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000250018.6
CDS-3UTR TCA 90 bp ATTGCATACCTTTCTGTTTATGGCCTCACCTTATACCTTAGAAATAAAGTACTCGCCAAAAGCGGGACATaGCCTAAGAGTTCATGGCAG +
Preference number: 4 (lower is better)
Translates to: IAYLSVYGLTLYLRNKVLAKSGT*PKSSWQ
Trigger: CTGCCATGAACTCTTAGGTCATGTCCCGCTTTTGGC...GAGTACTTTATTTCTAAGGTATAAGGTGAGGCCATAAACAGAAAGGTATGCAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000250018.6
CDS-3UTR TCA 90 bp ATTGCATACCTTTCTGTTTATGGCCTCACCTTATACCTTAGAAATAAAGTACTCCACGTTGCCAGTTTTTaGACAGCCTCCTCTGAAGCG +
Preference number: 4 (lower is better)
Translates to: IAYLSVYGLTLYLRNKVLHVASF*TASSEA
Trigger: CGCTTCAGAGGAGGCTGTTCAAAAACTGGCAACGTG...GAGTACTTTATTTCTAAGGTATAAGGTGAGGCCATAAACAGAAAGGTATGCAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000250018.6
CDS-3UTR TCA 90 bp GGGTCAAACAACTTCTCTATTAAAAATGGGTGGTCAGTGGCTTGTATGGTATATGACCAAACTCCACAGTaGAAAAGTAGCACGTTGCCA +
Preference number: 4 (lower is better)
Translates to: GSNNFSIKNGWSVACMVYDQTPQ*KSSTLP
Trigger: TGGCAACGTGCTACTTTTTCACTGTGGAGTTTGGTC...ATATACCATACAAGCCACTGACCACCCATTTTTAATAGAGAAGTTGTTTGACCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000250018.6
CDS-3UTR TCA 90 bp CTTTATAGACCTGTTCAATTTGAGATGCTTGGCAGGGCTGTCATATTGAACAACACTGGGAAAGGAAGCTaGTGGACTGTGATATTCAAG +
Preference number: 4 (lower is better)
Translates to: LYRPVQFEMLGRAVILNNTGKGS*WTVIFK
Trigger: CTTGAATATCACAGTCCATCAGCTTCCTTTCCCAGT...GTTGTTCAATATGACAGCCCTGCCAAGCATCTCAAATTGAACAGGTCTATAAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000250018.6
CDS-3UTR GCA 90 bp ATAACAGGACTGCTTACTCCCTGTGCTACACAGCTGACTCTGCATAAAAACCATGTCTCACATATTGAGTaGAGTGAAAAACTCGAAAGG +
Preference number: 4 (lower is better)
Translates to: ITGLLTPCATQLTLHKNHVSHIE*SEKLER
Trigger: CCTTTCGAGTTTTTCACTGCACTCAATATGTGAGAC...ATGGTTTTTATGCAGAGTCAGCTGTGTAGCACAGGGAGTAAGCAGTCCTGTTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000250018.6
CDS-3UTR CCA 90 bp GGTAATCTTGGGATCAAAGGGCTTTACTTTGGCATGTCCAGAAAGTGCATGTTTTCTTTGAAGCCAGGATaGTCTGCATCTAGTTCAGAT +
Preference number: 4 (lower is better)
Translates to: GNLGIKGLYFGMSRKCMFSLKPG*SASSSD
Trigger: ATCTGAACTAGATGCAGACCATCCTGGCTTCAAAGA...AAACATGCACTTTCTGGACATGCCAAAGTAAAGCCCTTTGATCCCAAGATTACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417164.5
CDS-3UTR CCA 90 bp AATACTCCTCAAGTTATTCTAAGCGATCCTAAAGGGTCATTTTACTCAAGGAGGAGTTTGTTGAGCTCTTaGAATACGGTTCCCCAGGTC +
Preference number: 4 (lower is better)
Translates to: NTPQVILSDPKGSFYSRRSLLSS*NTVPQV
Trigger: GACCTGGGGAACCGTATTCCAAGAGCTCAACAAACT...CCTCCTTGAGTAAAATGACCCTTTAGGATCGCTTAGAATAACTTGAGGAGTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000250018.6
CDS-3UTR CCA 90 bp GGTAATCTTGGGATCAAAGGGCTTTACTTTGGCATGTCCAGAAAGTGCATGTTTCACTGGTTATGCTCTTaGTGTCTTTCAGGATCTGAA +
Preference number: 4 (lower is better)
Translates to: GNLGIKGLYFGMSRKCMFHWLCS*CLSGSE
Trigger: TTCAGATCCTGAAAGACACCAAGAGCATAACCAGTG...AAACATGCACTTTCTGGACATGCCAAAGTAAAGCCCTTTGATCCCAAGATTACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417164.5
CDS-3UTR TCA 90 bp AACCATTCCTTGGCAATCCTTACATTACTTACAGTCTCAGTCCTAAACCACTCTAGATACAACTTTGCCTaGCACCTGCCTAGAATAGAA +
Preference number: 4 (lower is better)
Translates to: NHSLAILTLLTVSVLNHSRYNFA*HLPRIE
Trigger: TTCTATTCTAGGCAGGTGTCAGGCAAAGTTGTATCT...AGAGTGGTTTAGGACTGAGACTGTAAGTAATGTAAGGATTGCCAAGGAATGGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000250018.6
CDS-3UTR TCA 90 bp CTTTATAGACCTGTTCAATTTGAGATGCTTGGCAGGGCTGTCATATTGAACAACGTGTCTTTCAGGATCTaGATACTCCGTGTATATGGA +
Preference number: 4 (lower is better)
Translates to: LYRPVQFEMLGRAVILNNVSFRI*ILRVYG
Trigger: TCCATATACACGGAGTATTCAGATCCTGAAAGACAC...GTTGTTCAATATGACAGCCCTGCCAAGCATCTCAAATTGAACAGGTCTATAAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000250018.6
CDS-3UTR GCA 90 bp AACCATTCCTTGGCAATCCTTACATTACTTACAGTCTCAGTCCTAAACCACTCTGAAAAAGTAGCACGTTaGCAGTTTTTGAACAGCCTC +
Preference number: 4 (lower is better)
Translates to: NHSLAILTLLTVSVLNHSEKVAR*QFLNSL
Trigger: GAGGCTGTTCAAAAACTGGCAACGTGCTACTTTTTC...AGAGTGGTTTAGGACTGAGACTGTAAGTAATGTAAGGATTGCCAAGGAATGGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000250018.6
CDS-3UTR GCA 90 bp CTTTATAGACCTGTTCAATTTGAGATGCTTGGCAGGGCTGTCATATTGAACAACGGCATGTCCAGAAAGTaGATGTTTGAGTTCACTGAT +
Preference number: 4 (lower is better)
Translates to: LYRPVQFEMLGRAVILNNGMSRK*MFEFTD
Trigger: ATCAGTGAACTCAAACATGCACTTTCTGGACATGCC...GTTGTTCAATATGACAGCCCTGCCAAGCATCTCAAATTGAACAGGTCTATAAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000250018.6
CDS-3UTR CCA 90 bp ATTGCATACCTTTCTGTTTATGGCCTCACCTTATACCTTAGAAATAAAGTACTCATGACTGAAGCCTGCTaGCTTCTTGCAGTCTTCCCA +
Preference number: 4 (lower is better)
Translates to: IAYLSVYGLTLYLRNKVLMTEAC*LLAVFP
Trigger: TGGGAAGACTGCAAGAAGCCAGCAGGCTTCAGTCAT...GAGTACTTTATTTCTAAGGTATAAGGTGAGGCCATAAACAGAAAGGTATGCAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000250018.6
CDS-3UTR CCA 90 bp CAATTTGAGATGCTTGGCAGGGCTGTCATATTGAACAACCCCTATTCATTCTATATTTCTTGGGAGAATTaGGCAAAACTAGGTTCAGCC +
Preference number: 4 (lower is better)
Translates to: QFEMLGRAVILNNPYSFYISWEN*AKLGSA
Trigger: GGCTGAACCTAGTTTTGCCCAATTCTCCCAAGAAAT...ATAGAATGAATAGGGGTTGTTCAATATGACAGCCCTGCCAAGCATCTCAAATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000250018.6
CDS-3UTR CCA 90 bp CAATTTGAGATGCTTGGCAGGGCTGTCATATTGAACAACCCCTATTCATTCTATCAAAGGGCTTTACTTTaGCATGTCCAGAAAGTGCAT +
Preference number: 4 (lower is better)
Translates to: QFEMLGRAVILNNPYSFYQRALL*HVQKVH
Trigger: ATGCACTTTCTGGACATGCCAAAGTAAAGCCCTTTG...ATAGAATGAATAGGGGTTGTTCAATATGACAGCCCTGCCAAGCATCTCAAATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000250018.6
CDS-3UTR CCA 90 bp GGGTCAAACAACTTCTCTATTAAAAATGGGTGGTCAGTGGCTTGTATGGTATATGCTCATTCATGGCACTaGTTATGCTCTTGGTGTCTT +
Preference number: 4 (lower is better)
Translates to: GSNNFSIKNGWSVACMVYAHSWH*LCSWCL
Trigger: AAGACACCAAGAGCATAACCAGTGCCATGAATGAGC...ATATACCATACAAGCCACTGACCACCCATTTTTAATAGAGAAGTTGTTTGACCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000250018.6
CDS-3UTR CCA 90 bp ATAACAGGACTGCTTACTCCCTGTGCTACACAGCTGACTCTGCATAAAAACCATTGCTTCCTGTTAATCTaGGGACAATCCCATTATAAT +
Preference number: 4 (lower is better)
Translates to: ITGLLTPCATQLTLHKNHCFLLI*GQSHYN
Trigger: ATTATAATGGGATTGTCCCCAGATTAACAGGAAGCA...ATGGTTTTTATGCAGAGTCAGCTGTGTAGCACAGGGAGTAAGCAGTCCTGTTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000250018.6
CDS-3UTR CCA 90 bp ATAACAGGACTGCTTACTCCCTGTGCTACACAGCTGACTCTGCATAAAAACCATTGGAAATTAAATTACTaGGAAAGGAAGCTGATGGAC +
Preference number: 4 (lower is better)
Translates to: ITGLLTPCATQLTLHKNHWKLNY*ERKLMD
Trigger: GTCCATCAGCTTCCTTTCCCAGTAATTTAATTTCCA...ATGGTTTTTATGCAGAGTCAGCTGTGTAGCACAGGGAGTAAGCAGTCCTGTTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000250018.6
CDS-3UTR TCA 90 bp CTTTATAGACCTGTTCAATTTGAGATGCTTGGCAGGGCTGTCATATTGAACAACTTCACATGCTTCTCCTaGAAGATTTTCAGGGCTTTT +
Preference number: 4 (lower is better)
Translates to: LYRPVQFEMLGRAVILNNFTCFS*KIFRAF
Trigger: AAAAGCCCTGAAAATCTTTCAGGAGAAGCATGTGAA...GTTGTTCAATATGACAGCCCTGCCAAGCATCTCAAATTGAACAGGTCTATAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000250018.6
CDS-3UTR TCA 90 bp CAATTTGAGATGCTTGGCAGGGCTGTCATATTGAACAACCCCTATTCATTCTATGCAAAGGTAAGTTTTTaGGATACTCTCTGCAAGCAT +
Preference number: 4 (lower is better)
Translates to: QFEMLGRAVILNNPYSFYAKVSF*DTLCKH
Trigger: ATGCTTGCAGAGAGTATCTCAAAAACTTACCTTTGC...ATAGAATGAATAGGGGTTGTTCAATATGACAGCCCTGCCAAGCATCTCAAATTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000250018.6
CDS-3UTR TCA 90 bp GGGTCAAACAACTTCTCTATTAAAAATGGGTGGTCAGTGGCTTGTATGGTATATGGTATAGAAGGGATCTaGACTGTGTCTCACATATTG +
Preference number: 4 (lower is better)
Translates to: GSNNFSIKNGWSVACMVYGIEGI*TVSHIL
Trigger: CAATATGTGAGACACAGTTCAGATCCCTTCTATACC...ATATACCATACAAGCCACTGACCACCCATTTTTAATAGAGAAGTTGTTTGACCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000250018.6
CDS-3UTR TCA 90 bp GGGTCAAACAACTTCTCTATTAAAAATGGGTGGTCAGTGGCTTGTATGGTATATTCAAATGTTCCTGGATaGCTGGCTACTGTTAGATAC +
Preference number: 4 (lower is better)
Translates to: GSNNFSIKNGWSVACMVYSNVPG*LATVRY
Trigger: GTATCTAACAGTAGCCAGTCATCCAGGAACATTTGA...ATATACCATACAAGCCACTGACCACCCATTTTTAATAGAGAAGTTGTTTGACCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000250018.6
CDS-3UTR CCA 90 bp GGGTCAAACAACTTCTCTATTAAAAATGGGTGGTCAGTGGCTTGTATGGTATATCACTGGTTATGCTCTTaGTGTCTTTCAGGATCTGAA +
Preference number: 4 (lower is better)
Translates to: GSNNFSIKNGWSVACMVYHWLCS*CLSGSE
Trigger: TTCAGATCCTGAAAGACACCAAGAGCATAACCAGTG...ATATACCATACAAGCCACTGACCACCCATTTTTAATAGAGAAGTTGTTTGACCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000250018.6
CDS-3UTR CCA 90 bp AACCATTCCTTGGCAATCCTTACATTACTTACAGTCTCAGTCCTAAACCACTCTTTCGATAATATTGTTTaGCCAGAAGATGCTGTCCCT +
Preference number: 4 (lower is better)
Translates to: NHSLAILTLLTVSVLNHSFDNIV*PEDAVP
Trigger: AGGGACAGCATCTTCTGGCCAAACAATATTATCGAA...AGAGTGGTTTAGGACTGAGACTGTAAGTAATGTAAGGATTGCCAAGGAATGGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000250018.6
3UTR CAA 72 bp AAAGTTGTGATAAGACATTCCTGTTTGCAGGTAATCTaGGGATCAAAGGGCTTTACTTTGGCATGTCCAGAA +
Preference number: 4 (lower is better)
Translates to: KVVIRHSCLQVI*GSKGFTLACPE
Trigger: TTCTGGACATGCCAAAGTAAAGCCCTTTGATCCCAAGATTACCTGCAAACAGGAATGTCTTATCACAACTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417164.5
CDS-3UTR TCA 90 bp ATTGCATACCTTTCTGTTTATGGCCTCACCTTATACCTTAGAAATAAAGTACTCTTGGGTAGAGTTTGTTaGGCTCTTGGAATACGGTTC +
Preference number: 4 (lower is better)
Translates to: IAYLSVYGLTLYLRNKVLLGRVC*ALGIRF
Trigger: GAACCGTATTCCAAGAGCTCAACAAACTCTACCCAA...GAGTACTTTATTTCTAAGGTATAAGGTGAGGCCATAAACAGAAAGGTATGCAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000250018.6
CDS-3UTR TCA 90 bp AATACTCCTCAAGTTATTCTAAGCGATCCTAAAGGGTCATTTTACTCAAGGAGGTTCATTCTATGTGGATaGTGCCACATGAAGTTGTAC +
Preference number: 4 (lower is better)
Translates to: NTPQVILSDPKGSFYSRRFILCG*CHMKLY
Trigger: GTACAACTTCATGTGGCATCATCCACATAGAATGAA...CCTCCTTGAGTAAAATGACCCTTTAGGATCGCTTAGAATAACTTGAGGAGTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000250018.6
CDS-3UTR GCA 90 bp AACCATTCCTTGGCAATCCTTACATTACTTACAGTCTCAGTCCTAAACCACTCTAGCTCTAGATACATATaGACTAGATGGATAACTGCT +
Preference number: 4 (lower is better)
Translates to: NHSLAILTLLTVSVLNHSSSRYI*TRWITA
Trigger: AGCAGTTATCCATCTAGTGCATATGTATCTAGAGCT...AGAGTGGTTTAGGACTGAGACTGTAAGTAATGTAAGGATTGCCAAGGAATGGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000250018.6
CDS-3UTR GCA 90 bp AACCATTCCTTGGCAATCCTTACATTACTTACAGTCTCAGTCCTAAACCACTCTTATGCAGATAAGCTTTaGAAGAATCTAGTGAGACCA +
Preference number: 4 (lower is better)
Translates to: NHSLAILTLLTVSVLNHSYADKL*KNLVRP
Trigger: TGGTCTCACTAGATTCTTGCAAAGCTTATCTGCATA...AGAGTGGTTTAGGACTGAGACTGTAAGTAATGTAAGGATTGCCAAGGAATGGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000250018.6
CDS-3UTR GCA 90 bp ATTGCATACCTTTCTGTTTATGGCCTCACCTTATACCTTAGAAATAAAGTACTCTCATGGCACTGGTTATaGTCTTGGTGTCTTTCAGGA +
Preference number: 4 (lower is better)
Translates to: IAYLSVYGLTLYLRNKVLSWHWL*SWCLSG
Trigger: TCCTGAAAGACACCAAGAGCATAACCAGTGCCATGA...GAGTACTTTATTTCTAAGGTATAAGGTGAGGCCATAAACAGAAAGGTATGCAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000250018.6
CDS-3UTR CCA 90 bp AATACTCCTCAAGTTATTCTAAGCGATCCTAAAGGGTCATTTTACTCAAGGAGGTGTAAACTAAAGGCCTaGCCAGCTCTAGATACATAT +
Preference number: 4 (lower is better)
Translates to: NTPQVILSDPKGSFYSRRCKLKA*PALDTY
Trigger: ATATGTATCTAGAGCTGGCCAGGCCTTTAGTTTACA...CCTCCTTGAGTAAAATGACCCTTTAGGATCGCTTAGAATAACTTGAGGAGTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000250018.6
CDS-3UTR CCA 90 bp AACCATTCCTTGGCAATCCTTACATTACTTACAGTCTCAGTCCTAAACCACTCTATACCAGGTCTCAAATaGTTTCCCCAAATGTTCTAT +
Preference number: 4 (lower is better)
Translates to: NHSLAILTLLTVSVLNHSIPGLK*FPQMFY
Trigger: ATAGAACATTTGGGGAAACCATTTGAGACCTGGTAT...AGAGTGGTTTAGGACTGAGACTGTAAGTAATGTAAGGATTGCCAAGGAATGGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000250018.6
CDS-3UTR CCA 90 bp AATACTCCTCAAGTTATTCTAAGCGATCCTAAAGGGTCATTTTACTCAAGGAGGTCACAGAGAGAACATTaGTATGAGACTTCAGCAGAT +
Preference number: 4 (lower is better)
Translates to: NTPQVILSDPKGSFYSRRSQREH*YETSAD
Trigger: ATCTGCTGAAGTCTCATACCAATGTTCTCTCTGTGA...CCTCCTTGAGTAAAATGACCCTTTAGGATCGCTTAGAATAACTTGAGGAGTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000250018.6
CDS-3UTR CCA 90 bp AACCATTCCTTGGCAATCCTTACATTACTTACAGTCTCAGTCCTAAACCACTCTGTCAGAAATCTTCTTTaGAAACCAAGGAACAGTTTC +
Preference number: 4 (lower is better)
Translates to: NHSLAILTLLTVSVLNHSVRNLL*KPRNSF
Trigger: GAAACTGTTCCTTGGTTTCCAAAGAAGATTTCTGAC...AGAGTGGTTTAGGACTGAGACTGTAAGTAATGTAAGGATTGCCAAGGAATGGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000250018.6
CDS-3UTR CCA 90 bp AATACTCCTCAAGTTATTCTAAGCGATCCTAAAGGGTCATTTTACTCAAGGAGGAGTGAATTCAACCTTTaGAATGGGGTCTCCATGTTT +
Preference number: 4 (lower is better)
Translates to: NTPQVILSDPKGSFYSRRSEFNL*NGVSMF
Trigger: AAACATGGAGACCCCATTCCAAAGGTTGAATTCACT...CCTCCTTGAGTAAAATGACCCTTTAGGATCGCTTAGAATAACTTGAGGAGTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000250018.6
CDS-3UTR CCA 90 bp GGGCTTTACTTTGGCATGTCCAGAAAGTGCATGTTTGAGTTCACTGATAGAAGAATACTTCACTCCAAATaGACGCTTAATTGTTTTGGT +
Preference number: 4 (lower is better)
Translates to: GLYFGMSRKCMFEFTDRRILHSK*TLNCFG
Trigger: ACCAAAACAATTAAGCGTCCATTTGGAGTGAAGTAT...TCTTCTATCAGTGAACTCAAACATGCACTTTCTGGACATGCCAAAGTAAAGCCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417164.5
CDS-3UTR CCA 90 bp CTTTATAGACCTGTTCAATTTGAGATGCTTGGCAGGGCTGTCATATTGAACAACTCTATTAAAAATGGGTaGTCAGTGGCTTGTATGGTA +
Preference number: 4 (lower is better)
Translates to: LYRPVQFEMLGRAVILNNSIKNG*SVACMV
Trigger: TACCATACAAGCCACTGACCACCCATTTTTAATAGA...GTTGTTCAATATGACAGCCCTGCCAAGCATCTCAAATTGAACAGGTCTATAAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000250018.6
CDS-3UTR CCA 90 bp AACCATTCCTTGGCAATCCTTACATTACTTACAGTCTCAGTCCTAAACCACTCTCCTATTCATTCTATGTaGATGATGCCACATGAAGTT +
Preference number: 4 (lower is better)
Translates to: NHSLAILTLLTVSVLNHSPIHSM*MMPHEV
Trigger: AACTTCATGTGGCATCATCCACATAGAATGAATAGG...AGAGTGGTTTAGGACTGAGACTGTAAGTAATGTAAGGATTGCCAAGGAATGGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000250018.6
CDS-3UTR TCA 90 bp GGGTCAAACAACTTCTCTATTAAAAATGGGTGGTCAGTGGCTTGTATGGTATATCATTGGCCTAAATTATaGGACATCTACATAGACATC +
Preference number: 4 (lower is better)
Translates to: GSNNFSIKNGWSVACMVYHWPKL*DIYIDI
Trigger: GATGTCTATGTAGATGTCTCATAATTTAGGCCAATG...ATATACCATACAAGCCACTGACCACCCATTTTTAATAGAGAAGTTGTTTGACCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000250018.6
CDS-3UTR TCA 90 bp ATTGCATACCTTTCTGTTTATGGCCTCACCTTATACCTTAGAAATAAAGTACTCGAAGCTGATGGACTGTaGTATTCAAGTGATTCTGAG +
Preference number: 4 (lower is better)
Translates to: IAYLSVYGLTLYLRNKVLEADGL*YSSDSE
Trigger: CTCAGAATCACTTGAATATCACAGTCCATCAGCTTC...GAGTACTTTATTTCTAAGGTATAAGGTGAGGCCATAAACAGAAAGGTATGCAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000250018.6
CDS-3UTR GCA 90 bp ATTGCATACCTTTCTGTTTATGGCCTCACCTTATACCTTAGAAATAAAGTACTCCTGTTCAATTTGAGATaGTTGGCAGGGCTGTCATAT +
Preference number: 4 (lower is better)
Translates to: IAYLSVYGLTLYLRNKVLLFNLR*LAGLSY
Trigger: ATATGACAGCCCTGCCAAGCATCTCAAATTGAACAG...GAGTACTTTATTTCTAAGGTATAAGGTGAGGCCATAAACAGAAAGGTATGCAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000250018.6
CDS-3UTR CCA 90 bp ATTGCATACCTTTCTGTTTATGGCCTCACCTTATACCTTAGAAATAAAGTACTCTCTTTGAAGCCAGGATaGTCTGCATCTAGTTCAGAT +
Preference number: 4 (lower is better)
Translates to: IAYLSVYGLTLYLRNKVLSLKPG*SASSSD
Trigger: ATCTGAACTAGATGCAGACCATCCTGGCTTCAAAGA...GAGTACTTTATTTCTAAGGTATAAGGTGAGGCCATAAACAGAAAGGTATGCAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000250018.6
CDS-3UTR CCA 90 bp GGGTCAAACAACTTCTCTATTAAAAATGGGTGGTCAGTGGCTTGTATGGTATATATTCAACCTTTGGAATaGGGTCTCCATGTTTATAGT +
Preference number: 4 (lower is better)
Translates to: GSNNFSIKNGWSVACMVYIQPLE*GLHVYS
Trigger: ACTATAAACATGGAGACCCCATTCCAAAGGTTGAAT...ATATACCATACAAGCCACTGACCACCCATTTTTAATAGAGAAGTTGTTTGACCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000250018.6
CDS-3UTR CCA 90 bp ATTGCATACCTTTCTGTTTATGGCCTCACCTTATACCTTAGAAATAAAGTACTCGCCAAGCCAATTTCTTaGGAGAATTGGGCAAAACTA +
Preference number: 4 (lower is better)
Translates to: IAYLSVYGLTLYLRNKVLAKPIS*ENWAKL
Trigger: TAGTTTTGCCCAATTCTCCCAAGAAATTGGCTTGGC...GAGTACTTTATTTCTAAGGTATAAGGTGAGGCCATAAACAGAAAGGTATGCAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000250018.6
CDS-3UTR CCA 90 bp ATCTTGAAAAGTTGTGATAAGACATTCCTGTTTGCAGGTAATCTTGGGATCAAACAAAGGGCTTTACTTTaGCATGTCCAGAAAGTGCAT +
Preference number: 4 (lower is better)
Translates to: ILKSCDKTFLFAGNLGIKQRALL*HVQKVH
Trigger: ATGCACTTTCTGGACATGCCAAAGTAAAGCCCTTTG...TTTGATCCCAAGATTACCTGCAAACAGGAATGTCTTATCACAACTTTTCAAGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417164.5
CDS-3UTR CCA 90 bp CAATTTGAGATGCTTGGCAGGGCTGTCATATTGAACAACCCCTATTCATTCTATAAAATGGGTGGTCAGTaGCTTGTATGGTATATAAAT +
Preference number: 4 (lower is better)
Translates to: QFEMLGRAVILNNPYSFYKMGGQ*LVWYIN
Trigger: ATTTATATACCATACAAGCCACTGACCACCCATTTT...ATAGAATGAATAGGGGTTGTTCAATATGACAGCCCTGCCAAGCATCTCAAATTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000250018.6
CDS-3UTR CCA 90 bp ATTGCATACCTTTCTGTTTATGGCCTCACCTTATACCTTAGAAATAAAGTACTCGACATCTTCCAATTGTaGGATATTATCCTCCCGATA +
Preference number: 4 (lower is better)
Translates to: IAYLSVYGLTLYLRNKVLDIFQL*DIILPI
Trigger: TATCGGGAGGATAATATCCCACAATTGGAAGATGTC...GAGTACTTTATTTCTAAGGTATAAGGTGAGGCCATAAACAGAAAGGTATGCAAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000250018.6
CDS-3UTR CCA 90 bp ATTGCATACCTTTCTGTTTATGGCCTCACCTTATACCTTAGAAATAAAGTACTCATACTTCACTCCAAATaGACGCTTAATTGTTTTGGT +
Preference number: 4 (lower is better)
Translates to: IAYLSVYGLTLYLRNKVLILHSK*TLNCFG
Trigger: ACCAAAACAATTAAGCGTCCATTTGGAGTGAAGTAT...GAGTACTTTATTTCTAAGGTATAAGGTGAGGCCATAAACAGAAAGGTATGCAAT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000250018.6
CDS-3UTR CCA 90 bp ATTGCATACCTTTCTGTTTATGGCCTCACCTTATACCTTAGAAATAAAGTACTCCATAAGTTTGTATTTTaGAGTTCAGCTTCACCCATT +
Preference number: 4 (lower is better)
Translates to: IAYLSVYGLTLYLRNKVLHKFVF*SSASPI
Trigger: AATGGGTGAAGCTGAACTCCAAAATACAAACTTATG...GAGTACTTTATTTCTAAGGTATAAGGTGAGGCCATAAACAGAAAGGTATGCAAT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000250018.6
CDS CCA 90 bp GATGGCCCAGACCTCCGAATTGATGCTCAAATGTTCCTGGATGACTaGCTACTGTTAGATACTCGGCTTCCTGCTGACCTTAGCAAGGGC +
Preference number: 5 (lower is better)
Translates to: DGPDLRIDAQMFLDD*LLLDTRLPADLSKG
Trigger: GCCCTTGCTAAGGTCAGCAGGAAGCCGAGTATCTAACAGTAGCCAGTCATCCAGGAACATTTGAGCATCAATTCGGAGGTCTGGGCCATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000250018.6
ENST00000682019.1
CDS-3UTR CAA 90 bp CGGCTTCCTGCTGACCTTAGCAAGGGCATCACTGACAACATCGAGATCATGCTGACTGTGTCTCACATATaGAGTGCAGTGAAAAACTCG +
Preference number: 5 (lower is better)
Translates to: RLPADLSKGITDNIEIMLTVSHI*SAVKNS
Trigger: CGAGTTTTTCACTGCACTCAATATGTGAGACACAGT...CAGCATGATCTCGATGTTGTCAGTGATGCCCTTGCTAAGGTCAGCAGGAAGCCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000417164.5
CDS-3UTR CAA 90 bp CAATTTGAGATGCTTGGCAGGGCTGTCATATTGAACAACCCCTATTCATTCTATGCCTGCAGTCCCAGGTaGCAGCGAGCTGAAATCACG +
Preference number: 5 (lower is better)
Translates to: QFEMLGRAVILNNPYSFYACSPR*QRAEIT
Trigger: CGTGATTTCAGCTCGCTGCAACCTGGGACTGCAGGC...ATAGAATGAATAGGGGTTGTTCAATATGACAGCCCTGCCAAGCATCTCAAATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000250018.6
CDS-3UTR CAA 90 bp ATAACAGGACTGCTTACTCCCTGTGCTACACAGCTGACTCTGCATAAAAACCATTACCTCCTCCCCACCTaGCCCACAATCTTAGCACTT +
Preference number: 5 (lower is better)
Translates to: ITGLLTPCATQLTLHKNHYLLPT*PTILAL
Trigger: AAGTGCTAAGATTGTGGGCAAGGTGGGGAGGAGGTA...ATGGTTTTTATGCAGAGTCAGCTGTGTAGCACAGGGAGTAAGCAGTCCTGTTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000250018.6
CDS-3UTR CAA 90 bp ATAACAGGACTGCTTACTCCCTGTGCTACACAGCTGACTCTGCATAAAAACCATGAGTTTGTTGAGCTCTaGGAATACGGTTCCCCAGGT +
Preference number: 5 (lower is better)
Translates to: ITGLLTPCATQLTLHKNHEFVEL*EYGSPG
Trigger: ACCTGGGGAACCGTATTCCAAGAGCTCAACAAACTC...ATGGTTTTTATGCAGAGTCAGCTGTGTAGCACAGGGAGTAAGCAGTCCTGTTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000250018.6
CDS-3UTR CAA 90 bp ATAACAGGACTGCTTACTCCCTGTGCTACACAGCTGACTCTGCATAAAAACCATGGAGACATCTTCCAATaGTGGGATATTATCCTCCCG +
Preference number: 5 (lower is better)
Translates to: ITGLLTPCATQLTLHKNHGDIFQ*WDIILP
Trigger: CGGGAGGATAATATCCCACAATTGGAAGATGTCTCC...ATGGTTTTTATGCAGAGTCAGCTGTGTAGCACAGGGAGTAAGCAGTCCTGTTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000250018.6
CDS-3UTR CAA 90 bp GCAGCTCATTCATGGCACTGGTTATGCTCTTGGTGTCTTTCAGGATCTGAATACAGCCAAGCCAATTTCTaGGGAGAATTGGGCAAAACT +
Preference number: 5 (lower is better)
Translates to: AAHSWHWLCSWCLSGSEYSQANF*GELGKT
Trigger: AGTTTTGCCCAATTCTCCCAAGAAATTGGCTTGGCT...GTATTCAGATCCTGAAAGACACCAAGAGCATAACCAGTGCCATGAATGAGCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417164.5
CDS-3UTR CAA 90 bp CAATTTGAGATGCTTGGCAGGGCTGTCATATTGAACAACCCCTATTCATTCTATGCCCAGACCTCCGAATaGATGCTCAAATGTTCCTGG +
Preference number: 5 (lower is better)
Translates to: QFEMLGRAVILNNPYSFYAQTSE*MLKCSW
Trigger: CCAGGAACATTTGAGCATCAATTCGGAGGTCTGGGC...ATAGAATGAATAGGGGTTGTTCAATATGACAGCCCTGCCAAGCATCTCAAATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000250018.6
CDS-3UTR CAA 90 bp ATACTCGGCTTCCTGCTGACCTTAGCAAGGGCATCACTGACAACATCGAGATCATCTAAGGAATGGTCTTaGTTCTCCTTATTGTCTTCA +
Preference number: 5 (lower is better)
Translates to: ILGFLLTLARASLTTSRSSKEWS*FSLLSS
Trigger: TGAAGACAATAAGGAGAACAAAGACCATTCCTTAGA...TGATCTCGATGTTGTCAGTGATGCCCTTGCTAAGGTCAGCAGGAAGCCGAGTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417164.5
CDS-3UTR CAA 90 bp ATACTCGGCTTCCTGCTGACCTTAGCAAGGGCATCACTGACAACATCGAGATCAGAAAAACCTGTACGCTaGTTTATAGTTCATAGCCAA +
Preference number: 5 (lower is better)
Translates to: ILGFLLTLARASLTTSRSEKPVR*FIVHSQ
Trigger: TTGGCTATGAACTATAAACAAGCGTACAGGTTTTTC...TGATCTCGATGTTGTCAGTGATGCCCTTGCTAAGGTCAGCAGGAAGCCGAGTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000417164.5
CDS-3UTR CAA 90 bp GGGTCAAACAACTTCTCTATTAAAAATGGGTGGTCAGTGGCTTGTATGGTATATAAGCCTGCTGGCTTCTaGCAGTCTTCCCAACTATTG +
Preference number: 5 (lower is better)
Translates to: GSNNFSIKNGWSVACMVYKPAGF*QSSQLL
Trigger: CAATAGTTGGGAAGACTGCAAGAAGCCAGCAGGCTT...ATATACCATACAAGCCACTGACCACCCATTTTTAATAGAGAAGTTGTTTGACCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000250018.6
CDS-3UTR CAA 90 bp ATCACTGACAACATCGAGATCATGCTGCAGCTCATTCATGGCACTGGTTATGCTCCAGAAAGTGCATGTTaGAGTTCACTGATAGAAGAA +
Preference number: 5 (lower is better)
Translates to: ITDNIEIMLQLIHGTGYAPESAC*SSLIEE
Trigger: TTCTTCTATCAGTGAACTCAAACATGCACTTTCTGG...AGCATAACCAGTGCCATGAATGAGCTGCAGCATGATCTCGATGTTGTCAGTGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417164.5
CDS-3UTR CAA 90 bp GGGTCAAACAACTTCTCTATTAAAAATGGGTGGTCAGTGGCTTGTATGGTATATAAGGAAGATAGTCACTaGGGAAGGGGCTCCCTAATG +
Preference number: 5 (lower is better)
Translates to: GSNNFSIKNGWSVACMVYKEDSH*GRGSLM
Trigger: CATTAGGGAGCCCCTTCCCAAGTGACTATCTTCCTT...ATATACCATACAAGCCACTGACCACCCATTTTTAATAGAGAAGTTGTTTGACCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000250018.6
CDS-3UTR CAA 90 bp GGGCTTTACTTTGGCATGTCCAGAAAGTGCATGTTTGAGTTCACTGATAGAAGATGTTTGCAGGTAATCTaGGGATCAAAGGGCTTTACT +
Preference number: 5 (lower is better)
Translates to: GLYFGMSRKCMFEFTDRRCLQVI*GSKGFT
Trigger: AGTAAAGCCCTTTGATCCCAAGATTACCTGCAAACA...TCTTCTATCAGTGAACTCAAACATGCACTTTCTGGACATGCCAAAGTAAAGCCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417164.5
CDS-3UTR CAA 90 bp GGGTCAAACAACTTCTCTATTAAAAATGGGTGGTCAGTGGCTTGTATGGTATATATAGACCTGTTCAATTaGAGATGCTTGGCAGGGCTG +
Preference number: 5 (lower is better)
Translates to: GSNNFSIKNGWSVACMVYIDLFN*RCLAGL
Trigger: CAGCCCTGCCAAGCATCTCAAATTGAACAGGTCTAT...ATATACCATACAAGCCACTGACCACCCATTTTTAATAGAGAAGTTGTTTGACCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000250018.6
CDS-3UTR CAA 90 bp CTTTATAGACCTGTTCAATTTGAGATGCTTGGCAGGGCTGTCATATTGAACAACCACAATGTCAGGAGATaGAAACCATCCTGGCTAACA +
Preference number: 5 (lower is better)
Translates to: LYRPVQFEMLGRAVILNNHNVRR*KPSWLT
Trigger: TGTTAGCCAGGATGGTTTCAATCTCCTGACATTGTG...GTTGTTCAATATGACAGCCCTGCCAAGCATCTCAAATTGAACAGGTCTATAAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000250018.6
CDS-3UTR CAA 90 bp GGGCTTTACTTTGGCATGTCCAGAAAGTGCATGTTTGAGTTCACTGATAGAAGACTGATAAGAAATCTCTaGGTGATAAGTAACCAGCCA +
Preference number: 5 (lower is better)
Translates to: GLYFGMSRKCMFEFTDRRLIRNL*VISNQP
Trigger: TGGCTGGTTACTTATCACCAAGAGATTTCTTATCAG...TCTTCTATCAGTGAACTCAAACATGCACTTTCTGGACATGCCAAAGTAAAGCCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417164.5
CDS-3UTR CAA 90 bp AACCATTCCTTGGCAATCCTTACATTACTTACAGTCTCAGTCCTAAACCACTCTACTGTGTCTCACATATaGAGTGCAGTGAAAAACTCG +
Preference number: 5 (lower is better)
Translates to: NHSLAILTLLTVSVLNHSTVSHI*SAVKNS
Trigger: CGAGTTTTTCACTGCACTCAATATGTGAGACACAGT...AGAGTGGTTTAGGACTGAGACTGTAAGTAATGTAAGGATTGCCAAGGAATGGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000250018.6
CDS-3UTR CAA 90 bp AATACTCCTCAAGTTATTCTAAGCGATCCTAAAGGGTCATTTTACTCAAGGAGGAGCCAAGCCAATTTCTaGGGAGAATTGGGCAAAACT +
Preference number: 5 (lower is better)
Translates to: NTPQVILSDPKGSFYSRRSQANF*GELGKT
Trigger: AGTTTTGCCCAATTCTCCCAAGAAATTGGCTTGGCT...CCTCCTTGAGTAAAATGACCCTTTAGGATCGCTTAGAATAACTTGAGGAGTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000250018.6
CDS-3UTR CAA 90 bp AACCATTCCTTGGCAATCCTTACATTACTTACAGTCTCAGTCCTAAACCACTCTTGTTTGCAGGTAATCTaGGGATCAAAGGGCTTTACT +
Preference number: 5 (lower is better)
Translates to: NHSLAILTLLTVSVLNHSCLQVI*GSKGFT
Trigger: AGTAAAGCCCTTTGATCCCAAGATTACCTGCAAACA...AGAGTGGTTTAGGACTGAGACTGTAAGTAATGTAAGGATTGCCAAGGAATGGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000250018.6
CDS-3UTR CAA 90 bp AACCATTCCTTGGCAATCCTTACATTACTTACAGTCTCAGTCCTAAACCACTCTAAGGCCTCTATACTTTaGCTCATGCTAGCAACAAAG +
Preference number: 5 (lower is better)
Translates to: NHSLAILTLLTVSVLNHSKASIL*LMLATK
Trigger: CTTTGTTGCTAGCATGAGCAAAAGTATAGAGGCCTT...AGAGTGGTTTAGGACTGAGACTGTAAGTAATGTAAGGATTGCCAAGGAATGGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000250018.6
CDS-3UTR CAA 90 bp ATTGCATACCTTTCTGTTTATGGCCTCACCTTATACCTTAGAAATAAAGTACTCTACATCAGAACTCTGTaGGCACAATGGTCCAGGTCA +
Preference number: 5 (lower is better)
Translates to: IAYLSVYGLTLYLRNKVLYIRTL*AQWSRS
Trigger: TGACCTGGACCATTGTGCCAACAGAGTTCTGATGTA...GAGTACTTTATTTCTAAGGTATAAGGTGAGGCCATAAACAGAAAGGTATGCAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000250018.6
CDS-3UTR CAA 90 bp AACCATTCCTTGGCAATCCTTACATTACTTACAGTCTCAGTCCTAAACCACTCTAGCAAAGGTAAGTTTTaGAGATACTCTCTGCAAGCA +
Preference number: 5 (lower is better)
Translates to: NHSLAILTLLTVSVLNHSSKGKF*RYSLQA
Trigger: TGCTTGCAGAGAGTATCTCAAAAACTTACCTTTGCT...AGAGTGGTTTAGGACTGAGACTGTAAGTAATGTAAGGATTGCCAAGGAATGGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000250018.6
CDS-3UTR CAA 90 bp AACCATTCCTTGGCAATCCTTACATTACTTACAGTCTCAGTCCTAAACCACTCTCTGATAAGAAATCTCTaGGTGATAAGTAACCAGCCA +
Preference number: 5 (lower is better)
Translates to: NHSLAILTLLTVSVLNHSLIRNL*VISNQP
Trigger: TGGCTGGTTACTTATCACCAAGAGATTTCTTATCAG...AGAGTGGTTTAGGACTGAGACTGTAAGTAATGTAAGGATTGCCAAGGAATGGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000250018.6
CDS-3UTR CAA 90 bp AATACTCCTCAAGTTATTCTAAGCGATCCTAAAGGGTCATTTTACTCAAGGAGGAATTTCTTGGGAGAATaGGGCAAAACTAGGTTCAGC +
Preference number: 5 (lower is better)
Translates to: NTPQVILSDPKGSFYSRRNFLGE*GKTRFS
Trigger: GCTGAACCTAGTTTTGCCCAATTCTCCCAAGAAATT...CCTCCTTGAGTAAAATGACCCTTTAGGATCGCTTAGAATAACTTGAGGAGTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000250018.6
CDS-3UTR CAA 90 bp CTTTATAGACCTGTTCAATTTGAGATGCTTGGCAGGGCTGTCATATTGAACAACCCAGAAAGTGCATGTTaGAGTTCACTGATAGAAGAA +
Preference number: 5 (lower is better)
Translates to: LYRPVQFEMLGRAVILNNPESAC*SSLIEE
Trigger: TTCTTCTATCAGTGAACTCAAACATGCACTTTCTGG...GTTGTTCAATATGACAGCCCTGCCAAGCATCTCAAATTGAACAGGTCTATAAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000250018.6
CDS-3UTR CAA 90 bp ATTGCATACCTTTCTGTTTATGGCCTCACCTTATACCTTAGAAATAAAGTACTCGGCAGGGCTGTCATATaGAACAACCCCTATTCATTC +
Preference number: 5 (lower is better)
Translates to: IAYLSVYGLTLYLRNKVLGRAVI*NNPYSF
Trigger: GAATGAATAGGGGTTGTTCAATATGACAGCCCTGCC...GAGTACTTTATTTCTAAGGTATAAGGTGAGGCCATAAACAGAAAGGTATGCAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000250018.6
CDS-3UTR CAA 90 bp GGGTCAAACAACTTCTCTATTAAAAATGGGTGGTCAGTGGCTTGTATGGTATATTCCATTGTTCTGAAGTaGTGGATTATAAGGCTGTGC +
Preference number: 5 (lower is better)
Translates to: GSNNFSIKNGWSVACMVYSIVLK*WIIRLC
Trigger: GCACAGCCTTATAATCCACAACTTCAGAACAATGGA...ATATACCATACAAGCCACTGACCACCCATTTTTAATAGAGAAGTTGTTTGACCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000250018.6
CDS GCA 90 bp GGTAATCTTGGGATCAAAGGGCTTTACTTTGGCATGTCCAGAAAGTaGATGCTAGAAGACAAAGAGTCAGTGAATCAAAGAATAATATCT +
Preference number: 5 (lower is better)
Translates to: GNLGIKGLYFGMSRK*MLEDKESVNQRIIS
Trigger: AGATATTATTCTTTGATTCACTGACTCTTTGTCTTCTAGCATGCACTTTCTGGACATGCCAAAGTAAAGCCCTTTGATCCCAAGATTACC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525406.1
CDS-3UTR CAA 90 bp AACCATTCCTTGGCAATCCTTACATTACTTACAGTCTCAGTCCTAAACCACTCTTCTAAGGAATGGTCTTaGTTCTCCTTATTGTCTTCA +
Preference number: 5 (lower is better)
Translates to: NHSLAILTLLTVSVLNHSSKEWS*FSLLSS
Trigger: TGAAGACAATAAGGAGAACAAAGACCATTCCTTAGA...AGAGTGGTTTAGGACTGAGACTGTAAGTAATGTAAGGATTGCCAAGGAATGGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000250018.6
CDS-3UTR CAA 90 bp GGGTCAAACAACTTCTCTATTAAAAATGGGTGGTCAGTGGCTTGTATGGTATATCCTAAACCACTCTTCTaGACCTTTCTGACATTCTAT +
Preference number: 5 (lower is better)
Translates to: GSNNFSIKNGWSVACMVYPKPLF*TFLTFY
Trigger: ATAGAATGTCAGAAAGGTCAAGAAGAGTGGTTTAGG...ATATACCATACAAGCCACTGACCACCCATTTTTAATAGAGAAGTTGTTTGACCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000250018.6
CDS TCA 90 bp GCTTTGCAAGAATCTAGTGAGACCAAAATAAGATACAACTTTGCCTaGCACCTGCCTAGAATAGAATACATGTTAGTAGTTCCCTTTTGT +
Preference number: 5 (lower is better)
Translates to: ALQESSETKIRYNFA*HLPRIEYMLVVPFC
Trigger: ACAAAAGGGAACTACTAACATGTATTCTATTCTAGGCAGGTGTCAGGCAAAGTTGTATCTTATTTTGGTCTCACTAGATTCTTGCAAAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000250018.6
CDS-3UTR CAA 90 bp GGGTCAAACAACTTCTCTATTAAAAATGGGTGGTCAGTGGCTTGTATGGTATATCGCTCTTTTAAAAAGTaGGAGACATCTTCCAATTGT +
Preference number: 5 (lower is better)
Translates to: GSNNFSIKNGWSVACMVYRSFKK*ETSSNC
Trigger: ACAATTGGAAGATGTCTCCAACTTTTTAAAAGAGCG...ATATACCATACAAGCCACTGACCACCCATTTTTAATAGAGAAGTTGTTTGACCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000250018.6
CDS-3UTR CAA 90 bp ATTGCATACCTTTCTGTTTATGGCCTCACCTTATACCTTAGAAATAAAGTACTCTTTACTCAAGGAGGATaGGGGAAAATAGAGTTAGGC +
Preference number: 5 (lower is better)
Translates to: IAYLSVYGLTLYLRNKVLFTQGG*GKIELG
Trigger: GCCTAACTCTATTTTCCCCAATCCTCCTTGAGTAAA...GAGTACTTTATTTCTAAGGTATAAGGTGAGGCCATAAACAGAAAGGTATGCAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000250018.6
CDS-3UTR CAA 90 bp ATTGCATACCTTTCTGTTTATGGCCTCACCTTATACCTTAGAAATAAAGTACTCTCTGAAGACCAGCTTTaGAGCATCCTTAAGAAGTCA +
Preference number: 5 (lower is better)
Translates to: IAYLSVYGLTLYLRNKVLSEDQL*SILKKS
Trigger: TGACTTCTTAAGGATGCTCAAAAGCTGGTCTTCAGA...GAGTACTTTATTTCTAAGGTATAAGGTGAGGCCATAAACAGAAAGGTATGCAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000250018.6
CDS-3UTR CAA 90 bp ATTGCATACCTTTCTGTTTATGGCCTCACCTTATACCTTAGAAATAAAGTACTCTGGAATTCGATAATATaGTTTGGCCAGAAGATGCTG +
Preference number: 5 (lower is better)
Translates to: IAYLSVYGLTLYLRNKVLWNSII*FGQKML
Trigger: CAGCATCTTCTGGCCAAACAATATTATCGAATTCCA...GAGTACTTTATTTCTAAGGTATAAGGTGAGGCCATAAACAGAAAGGTATGCAAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000250018.6
CDS CCA 72 bp GACCTCCGAATTGATGCTCAAATGTTCCTGGATGACTaGCTACTGTTAGATACTCGGCTTCCTGCTGACCTT +
Preference number: 6 (lower is better)
Translates to: DLRIDAQMFLDD*LLLDTRLPADL
Trigger: AAGGTCAGCAGGAAGCCGAGTATCTAACAGTAGCCAGTCATCCAGGAACATTTGAGCATCAATTCGGAGGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000250018.6
ENST00000682019.1
CDS CAA 72 bp TCTGCAAGCATGGGTTGGGTAGAGTTTGTTGAGCTCTaGGAATACGGTTCCCCAGGTCTTAATCTCCTCTTC +
Preference number: 6 (lower is better)
Translates to: SASMGWVEFVEL*EYGSPGLNLLF
Trigger: GAAGAGGAGATTAAGACCTGGGGAACCGTATTCCAAGAGCTCAACAAACTCTACCCAACCCATGCTTGCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000250018.6
ENST00000682019.1
CDS CAA 90 bp GAGATACTCTCTGCAAGCATGGGTTGGGTAGAGTTTGTTGAGCTCTaGGAATACGGTTCCCCAGGTCTTAATCTCCTCTTCAGTGAATTC +
Preference number: 6 (lower is better)
Translates to: EILSASMGWVEFVEL*EYGSPGLNLLFSEF
Trigger: GAATTCACTGAAGAGGAGATTAAGACCTGGGGAACCGTATTCCAAGAGCTCAACAAACTCTACCCAACCCATGCTTGCAGAGAGTATCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000250018.6
ENST00000682019.1
CDS CAA 90 bp CCAGGATGGTCTGCATCTAGTTCAGATCCATACATCAGAACTCTGTaGGCACAATGGTCCAGGTCAGAAATCTTCTTTGGAAACCAAGGA +
Preference number: 6 (lower is better)
Translates to: PGWSASSSDPYIRTL*AQWSRSEIFFGNQG
Trigger: TCCTTGGTTTCCAAAGAAGATTTCTGACCTGGACCATTGTGCCAACAGAGTTCTGATGTATGGATCTGAACTAGATGCAGACCATCCTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000250018.6
ENST00000417164.5
ENST00000528338.1
ENST00000682019.1
CDS TCA 72 bp ATGGCAGGTATCTGGCTCTGGGGTATAGAAGGGATCTaGACTGTGTCTCACATATTGAGTGCAGTGAAAAAC +
Preference number: 6 (lower is better)
Translates to: MAGIWLWGIEGI*TVSHILSAVKN
Trigger: GTTTTTCACTGCACTCAATATGTGAGACACAGTTCAGATCCCTTCTATACCCCAGAGCCAGATACCTGCCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000250018.6
ENST00000417164.5
ENST00000682019.1
CDS CAA 72 bp TCTGCATCTAGTTCAGATCCATACATCAGAACTCTGTaGGCACAATGGTCCAGGTCAGAAATCTTCTTTGGA +
Preference number: 6 (lower is better)
Translates to: SASSSDPYIRTL*AQWSRSEIFFG
Trigger: TCCAAAGAAGATTTCTGACCTGGACCATTGTGCCAACAGAGTTCTGATGTATGGATCTGAACTAGATGCAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000250018.6
ENST00000417164.5
ENST00000528338.1
ENST00000682019.1
CDS CCA 72 bp CCAGGTCTTAATCTCCTCTTCAGTGAATTCAACCTTTaGAATGGGGTCTCCATGTTTATAGTTCATAGCCAA +
Preference number: 6 (lower is better)
Translates to: PGLNLLFSEFNL*NGVSMFIVHSQ
Trigger: TTGGCTATGAACTATAAACATGGAGACCCCATTCCAAAGGTTGAATTCACTGAAGAGGAGATTAAGACCTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000250018.6
ENST00000682019.1
CDS CAA 72 bp GAAAAACTCGAAAGGCTAAACCTGATAAGAAATCTCTaGGTGATAAGTAACCAGCCACAGGACGGATGGAAA +
Preference number: 6 (lower is better)
Translates to: EKLERLNLIRNL*VISNQPQDGWK
Trigger: TTTCCATCCGTCCTGTGGCTGGTTACTTATCACCAAGAGATTTCTTATCAGGTTTAGCCTTTCGAGTTTTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000250018.6
ENST00000417164.5
ENST00000682019.1