RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TPGS2 (Homo sapiens)

Ensembl gene IDs: ENSG00000134779

Ensembl transcript IDs: ENST00000334295.9, ENST00000383056.7, ENST00000585635.5, ENST00000587129.5, ENST00000587207.1, ENST00000587382.5, ENST00000587511.1, ENST00000588909.1, ENST00000589049.5, ENST00000590258.2, ENST00000590337.5, ENST00000590500.5, ENST00000590652.5, ENST00000590692.5, ENST00000590842.5, ENST00000591648.1, ENST00000591823.5, ENST00000591906.5, ENST00000593035.5, ENST00000610723.4, ENST00000614939.4

Found 962 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp ATTGGCGCCTGCTGCACACGCTACAGCTCCGGGGCTTCATGCTGCTaGCTCTTTGCTTGTGGCCAGTCCCCATGCCTGCAGAGACACAGC +
Preference number: 1 (lower is better)
Translates to: IGACCTRYSSGASCC*LFACGQSPCLQRHS
Trigger: GCTGTGTCTCTGCAGGCATGGGGACTGGCCACAAGCAAAGAGTCAGCAGCATGAAGCCCCGGAGCTGTAGCGTGTGCAGCAGGCGCCAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610723.4
3UTR GCA 90 bp GGGCTTCATGCTGCTGACTCTTTGCTTGTGGCCAGTCCCCATGCCTaGAGAGACACAGCTCCTCAGCTCCCATTGGAGGGGCTCAACAGC +
Preference number: 1 (lower is better)
Translates to: GLHAADSLLVASPHA*RDTAPQLPLEGLNS
Trigger: GCTGTTGAGCCCCTCCAATGGGAGCTGAGGAGCTGTGTCTCTGCAGGCATGGGGACTGGCCACAAGCAAAGAGTCAGCAGCATGAAGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610723.4
3UTR TCA 90 bp CGGAGTTGCAGCTGTGACACTCATAGGTTACTCCCAGGAGTGTGCTaGGCAGAAGGCAAGCTCTTGCTGGATGAAACCCCTCCAGGTGGG +
Preference number: 1 (lower is better)
Translates to: RSCSCDTHRLLPGVC*AEGKLLLDETPPGG
Trigger: CCCACCTGGAGGGGTTTCATCCAGCAAGAGCTTGCCTTCTGCTCAGCACACTCCTGGGAGTAACCTATGAGTGTCACAGCTGCAACTCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590258.2
3UTR GCA 90 bp ATTCCAAATTCCCCATTGCTTCCAGAGGCAGGGGACAGCACAACCTaGTCTGGAGGCCTCACTACGAGCCTGGCTAATGTCGGTGGGACT +
Preference number: 1 (lower is better)
Translates to: IPNSPLLPEAGDSTT*SGGLTTSLANVGGT
Trigger: AGTCCCACCGACATTAGCCAGGCTCGTAGTGAGGCCTCCAGAGCAGGTTGTGCTGTCCCCTGCCTCTGGAAGCAATGGGGAATTTGGAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334295.9
ENST00000383056.7
ENST00000593035.5
3UTR CCA 90 bp TCCCAGCGTCACCCCATGGCTTGTGTTGCCTGCTACGCATTGACTTaGATCTCCAGGAGTCCCCTGCACATACCTTCTCCATCGTGTCAG +
Preference number: 1 (lower is better)
Translates to: SQRHPMACVACYALT*ISRSPLHIPSPSCQ
Trigger: CTGACACGATGGAGAAGGTATGTGCAGGGGACTCCTGGAGATCCAAGTCAATGCGTAGCAGGCAACACAAGCCATGGGGTGACGCTGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590258.2
3UTR TCA 90 bp GATGGCCAGGGACCAGGCAAAGTGAGGCTGGACAACTCAGAGCTGTaGAGAGGCAGGCAGAGCAGGTGGAAAGCTTCTGTTAACAGTGTC +
Preference number: 1 (lower is better)
Translates to: DGQGPGKVRLDNSEL*RGRQSRWKASVNSV
Trigger: GACACTGTTAACAGAAGCTTTCCACCTGCTCTGCCTGCCTCTTCACAGCTCTGAGTTGTCCAGCCTCACTTTGCCTGGTCCCTGGCCATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334295.9
3UTR GCA 90 bp AAGGGAGAGCTCAATTCCCAGCGTCACCCCATGGCTTGTGTTGCCTaGTACGCATTGACTTGGATCTCCAGGAGTCCCCTGCACATACCT +
Preference number: 1 (lower is better)
Translates to: KGELNSQRHPMACVA*YALTWISRSPLHIP
Trigger: AGGTATGTGCAGGGGACTCCTGGAGATCCAAGTCAATGCGTAGCAGGCAACACAAGCCATGGGGTGACGCTGGGAATTGAGCTCTCCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590258.2
3UTR TCA 90 bp TCAATTCCCAGCGTCACCCCATGGCTTGTGTTGCCTGCTACGCATTaGCTTGGATCTCCAGGAGTCCCCTGCACATACCTTCTCCATCGT +
Preference number: 1 (lower is better)
Translates to: SIPSVTPWLVLPATH*LGSPGVPCTYLLHR
Trigger: ACGATGGAGAAGGTATGTGCAGGGGACTCCTGGAGATCCAAGTCAATGCGTAGCAGGCAACACAAGCCATGGGGTGACGCTGGGAATTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590258.2
3UTR GCA 90 bp TTCACCTGGCTCTCATTCTCTCTTTGCCTGCCACCATGTAAGATGTaGCTTTCGCCTTCTGCCGTGATTGTGAGGCCTCTCCAGCCACGT +
Preference number: 1 (lower is better)
Translates to: FTWLSFSLCLPPCKM*LSPSAVIVRPLQPR
Trigger: ACGTGGCTGGAGAGGCCTCACAATCACGGCAGAAGGCGAAAGGCACATCTTACATGGTGGCAGGCAAAGAGAGAATGAGAGCCAGGTGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587382.5
3UTR GCA 90 bp AGAGATTTGTCCTCACTGCTGCCCCTTGCCCTGGCTTCATGCACTTaGTCTGTGGGTCTTGAGCATGTCCCCAGCTATTGTTGGTCGTCT +
Preference number: 1 (lower is better)
Translates to: RDLSSLLPLALASCT*SVGLEHVPSYCWSS
Trigger: AGACGACCAACAATAGCTGGGGACATGCTCAAGACCCACAGAGCAAGTGCATGAAGCCAGGGCAAGGGGCAGCAGTGAGGACAAATCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590258.2
3UTR TCA 90 bp GTCTTGAGCATGTCCCCAGCTATTGTTGGTCGTCTGTTGGATTTGTaGGGTTGTTGGGTCTTGTGGAACCCCTCGCTGTGCACTGGTTGC +
Preference number: 1 (lower is better)
Translates to: VLSMSPAIVGRLLDL*GCWVLWNPSLCTGC
Trigger: GCAACCAGTGCACAGCGAGGGGTTCCACAAGACCCAACAACCTCACAAATCCAACAGACGACCAACAATAGCTGGGGACATGCTCAAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590258.2
3UTR CCA 90 bp TTTGGTCATTCAACTAGAAAGAGGCCTACGGTCCACACGCAAAACTaGAGGTCACCCCTAGGGCCATCTGTGCATGGAAACCACCACTCT +
Preference number: 1 (lower is better)
Translates to: FGHSTRKRPTVHTQN*RSPLGPSVHGNHHS
Trigger: AGAGTGGTGGTTTCCATGCACAGATGGCCCTAGGGGTGACCTCCAGTTTTGCGTGTGGACCGTAGGCCTCTTTCTAGTTGAATGACCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334295.9
ENST00000383056.7
ENST00000593035.5
3UTR CCA 90 bp GCATGTGGAGAATCCTGTGGACTGCTCTTAGTTCCCCAGTGGGTTTaGAAGAGGGAAACCCTGGGTCGATTAGCAGGTAGACAGTGCAAA +
Preference number: 1 (lower is better)
Translates to: ACGESCGLLLVPQWV*KRETLGRLAGRQCK
Trigger: TTTGCACTGTCTACCTGCTAATCGACCCAGGGTTTCCCTCTTCCAAACCCACTGGGGAACTAAGAGCAGTCCACAGGATTCTCCACATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334295.9
3UTR CCA 90 bp TACCATAGTTTACAATGGCAGGTGTTCCTCCCTTACCTTGGCCTGTaGGCTAATGCCATAGCTGGTGAAGGCATATTGCCACTGGGGCAG +
Preference number: 1 (lower is better)
Translates to: YHSLQWQVFLPYLGL*ANAIAGEGILPLGQ
Trigger: CTGCCCCAGTGGCAATATGCCTTCACCAGCTATGGCATTAGCCCACAGGCCAAGGTAAGGGAGGAACACCTGCCATTGTAAACTATGGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591823.5
3UTR GCA 90 bp ACTCAGACTTATTTGGGCACTTACACAAGATTCCAAATTCCCCATTaGTTCCAGAGGCAGGGGACAGCACAACCTGCTCTGGAGGCCTCA +
Preference number: 1 (lower is better)
Translates to: TQTYLGTYTRFQIPH*FQRQGTAQPALEAS
Trigger: TGAGGCCTCCAGAGCAGGTTGTGCTGTCCCCTGCCTCTGGAAGCAATGGGGAATTTGGAATCTTGTGTAAGTGCCCAAATAAGTCTGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334295.9
ENST00000383056.7
ENST00000593035.5
3UTR GCA 90 bp CTCGCTGTGCACTGGTTGCCTCACCTCATTTGTATTAGTGGAGCTTaGATTTTCCCCTGCTCTGGAATCACCTTCCCAGCTCTGATACAC +
Preference number: 1 (lower is better)
Translates to: LAVHWLPHLICISGA*IFPCSGITFPALIH
Trigger: GTGTATCAGAGCTGGGAAGGTGATTCCAGAGCAGGGGAAAATGCAAGCTCCACTAATACAAATGAGGTGAGGCAACCAGTGCACAGCGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590258.2
3UTR CCA 90 bp AAAAGTGCATGTGGAGAATCCTGTGGACTGCTCTTAGTTCCCCAGTaGGTTTGGAAGAGGGAAACCCTGGGTCGATTAGCAGGTAGACAG +
Preference number: 1 (lower is better)
Translates to: KSACGESCGLLLVPQ*VWKRETLGRLAGRQ
Trigger: CTGTCTACCTGCTAATCGACCCAGGGTTTCCCTCTTCCAAACCCACTGGGGAACTAAGAGCAGTCCACAGGATTCTCCACATGCACTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334295.9
3UTR CCA 90 bp GGATTTGTGAGGTTGTTGGGTCTTGTGGAACCCCTCGCTGTGCACTaGTTGCCTCACCTCATTTGTATTAGTGGAGCTTGCATTTTCCCC +
Preference number: 1 (lower is better)
Translates to: GFVRLLGLVEPLAVH*LPHLICISGACIFP
Trigger: GGGGAAAATGCAAGCTCCACTAATACAAATGAGGTGAGGCAACCAGTGCACAGCGAGGGGTTCCACAAGACCCAACAACCTCACAAATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590258.2
3UTR CCA 90 bp TCATGCACTTGCTCTGTGGGTCTTGAGCATGTCCCCAGCTATTGTTaGTCGTCTGTTGGATTTGTGAGGTTGTTGGGTCTTGTGGAACCC +
Preference number: 1 (lower is better)
Translates to: SCTCSVGLEHVPSYC*SSVGFVRLLGLVEP
Trigger: GGGTTCCACAAGACCCAACAACCTCACAAATCCAACAGACGACCAACAATAGCTGGGGACATGCTCAAGACCCACAGAGCAAGTGCATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590258.2
3UTR GCA 90 bp TGCTGTTTGCACAAAAGCCTCACATCTTCATTTTGTACTGGATCCTaGACTGAGTGGAGTCAGTCCTGCTCTTCCCTGCTCACTCCTTCT +
Preference number: 1 (lower is better)
Translates to: CCLHKSLTSSFCTGS*TEWSQSCSSLLTPS
Trigger: AGAAGGAGTGAGCAGGGAAGAGCAGGACTGACTCCACTCAGTGCAGGATCCAGTACAAAATGAAGATGTGAGGCTTTTGTGCAAACAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334295.9
3UTR GCA 90 bp TGGTTGCCTCACCTCATTTGTATTAGTGGAGCTTGCATTTTCCCCTaGTCTGGAATCACCTTCCCAGCTCTGATACACTCCTCATACTGG +
Preference number: 1 (lower is better)
Translates to: WLPHLICISGACIFP*SGITFPALIHSSYW
Trigger: CCAGTATGAGGAGTGTATCAGAGCTGGGAAGGTGATTCCAGAGCAGGGGAAAATGCAAGCTCCACTAATACAAATGAGGTGAGGCAACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590258.2
3UTR CCA 90 bp ACACTTGGAGAACAGGGGAGTGAGAATCTGACTTTTCACTCTTCCTaGGTGCATGTACTGCCAACCCAGAACAAGTCATGGGACATAAAC +
Preference number: 1 (lower is better)
Translates to: TLGEQGSENLTFHSS*VHVLPTQNKSWDIN
Trigger: GTTTATGTCCCATGACTTGTTCTGGGTTGGCAGTACATGCACCCAGGAAGAGTGAAAAGTCAGATTCTCACTCCCCTGTTCTCCAAGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589049.5
3UTR TCA 90 bp GTTCCCAGGAAGAAATCATATGACGTTCAGCAGGAGGCTTTTCTATaGTGGTCACCTCAGTCACACCTGGGGAAGATTCTGGAAGAGAAA +
Preference number: 1 (lower is better)
Translates to: VPRKKSYDVQQEAFL*WSPQSHLGKILEEK
Trigger: TTTCTCTTCCAGAATCTTCCCCAGGTGTGACTGAGGTGACCATCATAGAAAAGCCTCCTGCTGAACGTCATATGATTTCTTCCTGGGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590692.5
3UTR GCA 90 bp AAACTTTCCCACTGCCATTGCATGAATCCAGCTCAAATATCACACTaGGAGAGTCAAAGTGAGGCTTCTCTGGCTGATCATCACTGGCTT +
Preference number: 1 (lower is better)
Translates to: KLSHCHCMNPAQISH*ESQSEASLADHHWL
Trigger: AAGCCAGTGATGATCAGCCAGAGAAGCCTCACTTTGACTCTCGCAGTGTGATATTTGAGCTGGATTCATGCAATGGCAGTGGGAAAGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000585635.5
ENST00000590692.5
ENST00000591823.5
3UTR TCA 90 bp GTTCCCAGGAAGAAATCATATGACGTTCAGCAGGAGGCTTTTCTATaGTGGTCACCTCAGTCACACCTGGGGAAGATTCTGGATAATCTT +
Preference number: 1 (lower is better)
Translates to: VPRKKSYDVQQEAFL*WSPQSHLGKILDNL
Trigger: AAGATTATCCAGAATCTTCCCCAGGTGTGACTGAGGTGACCATCATAGAAAAGCCTCCTGCTGAACGTCATATGATTTCTTCCTGGGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591823.5
3UTR GCA 90 bp CATAGAAAACAGCCACCAATTCCAGCCAGAATAAGTTTGGCAGTTTaGTCCTTAGCCTCCATTCCTCGAGGAGCCACTGGTTATTTTAAT +
Preference number: 1 (lower is better)
Translates to: HRKQPPIPARISLAV*SLASIPRGATGYFN
Trigger: ATTAAAATAACCAGTGGCTCCTCGAGGAATGGAGGCTAAGGAGCAAACTGCCAAACTTATTCTGGCTGGAATTGGTGGCTGTTTTCTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590258.2
3UTR CCA 90 bp AACTCTTCACCTTGGTTTTCCTCAGGGGCTATGGAAAGTGGTAGGTaGAGGAGATATCGAAGGCGCTTTCTCATGAATATCTATCACTAT +
Preference number: 1 (lower is better)
Translates to: NSSPWFSSGAMESGR*RRYRRRFLMNIYHY
Trigger: ATAGTGATAGATATTCATGAGAAAGCGCCTTCGATATCTCCTCCACCTACCACTTTCCATAGCCCCTGAGGAAAACCAAGGTGAAGAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334295.9
3UTR TCA 90 bp GTTCCCAGGAAGAAATCATATGACGTTCAGCAGGAGGCTTTTCTATaGTGGTCACCTCAGTCACACCTGGGGAAGATTATCTTTAGATAT +
Preference number: 1 (lower is better)
Translates to: VPRKKSYDVQQEAFL*WSPQSHLGKIIFRY
Trigger: ATATCTAAAGATAATCTTCCCCAGGTGTGACTGAGGTGACCATCATAGAAAAGCCTCCTGCTGAACGTCATATGATTTCTTCCTGGGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585635.5
3UTR CCA 90 bp ACGTTCAGCAGGAGGCTTTTCTATGATGGTCACCTCAGTCACACCTaGGGAAGATTCTGGATAATCTTGCTTTTGCCATTTAATGTAACA +
Preference number: 1 (lower is better)
Translates to: TFSRRLFYDGHLSHT*GRFWIILLLPFNVT
Trigger: TGTTACATTAAATGGCAAAAGCAAGATTATCCAGAATCTTCCCCAGGTGTGACTGAGGTGACCATCATAGAAAAGCCTCCTGCTGAACGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591823.5
3UTR CCA 90 bp GTAACCATTTCCTCAGTAGATTTTGGAATATACCATAGTTTACAATaGCAGGTGTTCCTCCCTTACCTTGGCCTGTGGGCTAATGCCATA +
Preference number: 1 (lower is better)
Translates to: VTISSVDFGIYHSLQ*QVFLPYLGLWANAI
Trigger: TATGGCATTAGCCCACAGGCCAAGGTAAGGGAGGAACACCTGCCATTGTAAACTATGGTATATTCCAAAATCTACTGAGGAAATGGTTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591823.5
3UTR TCA 90 bp AGTTTATGCTCCCAAAGACTCTTAAGCGCTGATATTTCAAGACTTTaGACTATTACAAATATGGGGAAGCAGCCAGTTAGAGCTTGCCCT +
Preference number: 1 (lower is better)
Translates to: SLCSQRLLSADISRL*TITNMGKQPVRACP
Trigger: AGGGCAAGCTCTAACTGGCTGCTTCCCCATATTTGTAATAGTTCAAAGTCTTGAAATATCAGCGCTTAAGAGTCTTTGGGAGCATAAACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334295.9
3UTR CCA 90 bp AAATACTTCTGGAAGACTAAACTCCAGCTATTGTCCTCAACAACTTaGTCTCTCTATATCCTTTTCTGCCACTCCATGAATTGTTGCACA +
Preference number: 1 (lower is better)
Translates to: KYFWKTKLQLLSSTT*SLYILFCHSMNCCT
Trigger: TGTGCAACAATTCATGGAGTGGCAGAAAAGGATATAGAGAGACCAAGTTGTTGAGGACAATAGCTGGAGTTTAGTCTTCCAGAAGTATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334295.9
3UTR TCA 90 bp GAGATATTTGTGGTAAGGGATACAAAGAACATACAATTGTGTACTTaGGAGGTTTCATGGAACATTATGACCCATCCAATGAAGACATCA +
Preference number: 1 (lower is better)
Translates to: EIFVVRDTKNIQLCT*EVSWNIMTHPMKTS
Trigger: TGATGTCTTCATTGGATGGGTCATAATGTTCCATGAAACCTCTCAAGTACACAATTGTATGTTCTTTGTATCCCTTACCACAAATATCTC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334295.9
ENST00000383056.7
ENST00000593035.5
3UTR CCA 90 bp AAGGAAGATAATTGTGGAACGTGTACAAACATCATAACACAAAACTaGAAGCAAGAAACTTCACTGGAAACTGATGAGGAAGACAAACTT +
Preference number: 1 (lower is better)
Translates to: KEDNCGTCTNIITQN*KQETSLETDEEDKL
Trigger: AAGTTTGTCTTCCTCATCAGTTTCCAGTGAAGTTTCTTGCTTCCAGTTTTGTGTTATGATGTTTGTACACGTTCCACAATTATCTTCCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334295.9
3UTR-3UTR CCA 90 bp CCCTGGGCTTGGTTGGCACCTCGGAGTTGCAGCTGTGACACTCATAGGTTACTCCCCAGCGTCACCCCATaGCTTGTGTTGCCTGCTACG +
Preference number: 2 (lower is better)
Translates to: PWAWLAPRSCSCDTHRLLPSVTP*LVLPAT
Trigger: CGTAGCAGGCAACACAAGCCATGGGGTGACGCTGGG...GAGTAACCTATGAGTGTCACAGCTGCAACTCCGAGGTGCCAACCAAGCCCAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590258.2
3UTR CAA 90 bp CCTTACCTTGGCCTGTGGGCTAATGCCATAGCTGGTGAAGGCATATaGCCACTGGGGCAGGCCCAGGTGGGTGATGAGCAGGCGGTAATA +
Preference number: 2 (lower is better)
Translates to: PYLGLWANAIAGEGI*PLGQAQVGDEQAVI
Trigger: TATTACCGCCTGCTCATCACCCACCTGGGCCTGCCCCAGTGGCAATATGCCTTCACCAGCTATGGCATTAGCCCACAGGCCAAGGTAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591823.5
3UTR-3UTR CCA 90 bp CTGCTGCACACGCTACAGCTCCGGGGCTTCATGCTGCTGACTCTTTGCTTGTGGTTGTTCCCATGCTGTTaGATTGGCGCCTGCTGCACA +
Preference number: 2 (lower is better)
Translates to: LLHTLQLRGFMLLTLCLWLFPCC*IGACCT
Trigger: TGTGCAGCAGGCGCCAATCCAACAGCATGGGAACAA...CCACAAGCAAAGAGTCAGCAGCATGAAGCCCCGGAGCTGTAGCGTGTGCAGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610723.4
3UTR CAA 90 bp CTCAATTCCCAGCGTCACCCCATGGCTTGTGTTGCCTGCTACGCATaGACTTGGATCTCCAGGAGTCCCCTGCACATACCTTCTCCATCG +
Preference number: 2 (lower is better)
Translates to: LNSQRHPMACVACYA*TWISRSPLHIPSPS
Trigger: CGATGGAGAAGGTATGTGCAGGGGACTCCTGGAGATCCAAGTCAATGCGTAGCAGGCAACACAAGCCATGGGGTGACGCTGGGAATTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590258.2
3UTR-3UTR TCA 90 bp AGTCTGGAGGCCAAGGGATCAGGGGTGGGGGAAAGAGGAGCTAGTGCAAGAACATTGCTCTGTGGGTCTTaGGCATGTCCCCAGCTATTG +
Preference number: 2 (lower is better)
Translates to: SLEAKGSGVGERGASARTLLCGS*ACPQLL
Trigger: CAATAGCTGGGGACATGCTCAAGACCCACAGAGCAA...TGTTCTTGCACTAGCTCCTCTTTCCCCCACCCCTGATCCCTTGGCCTCCAGACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000590258.2
3UTR-3UTR CCA 90 bp TTGAGTGACACCGCTGACCTCCTGGTTCCTCCGCTGCTTCACTTGTGGAATCCAGCCTCACTACGAGCCTaGCTAATGTCGGTGGGACTA +
Preference number: 2 (lower is better)
Translates to: LSDTADLLVPPLLHLWNPASLRA*LMSVGL
Trigger: TAGTCCCACCGACATTAGCCAGGCTCGTAGTGAGGC...TGGATTCCACAAGTGAAGCAGCGGAGGAACCAGGAGGTCAGCGGTGTCACTCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334295.9
3UTR CAA 90 bp CATGTCCCCAGCTATTGTTGGTCGTCTGTTGGATTTGTGAGGTTGTaGGGTCTTGTGGAACCCCTCGCTGTGCACTGGTTGCCTCACCTC +
Preference number: 2 (lower is better)
Translates to: HVPSYCWSSVGFVRL*GLVEPLAVHWLPHL
Trigger: GAGGTGAGGCAACCAGTGCACAGCGAGGGGTTCCACAAGACCCAACAACCTCACAAATCCAACAGACGACCAACAATAGCTGGGGACATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590258.2
3UTR CAA 90 bp GAGCATGTCCCCAGCTATTGTTGGTCGTCTGTTGGATTTGTGAGGTaGTTGGGTCTTGTGGAACCCCTCGCTGTGCACTGGTTGCCTCAC +
Preference number: 2 (lower is better)
Translates to: EHVPSYCWSSVGFVR*LGLVEPLAVHWLPH
Trigger: GTGAGGCAACCAGTGCACAGCGAGGGGTTCCACAAGACCCAACAACCTCACAAATCCAACAGACGACCAACAATAGCTGGGGACATGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590258.2
3UTR CAA 90 bp AAGACCCACAGTACTCATGGAGAGATTTGTCCTCACTGCTGCCCCTaGCCCTGGCTTCATGCACTTGCTCTGTGGGTCTTGAGCATGTCC +
Preference number: 2 (lower is better)
Translates to: KTHSTHGEICPHCCP*PWLHALALWVLSMS
Trigger: GGACATGCTCAAGACCCACAGAGCAAGTGCATGAAGCCAGGGCAAGGGGCAGCAGTGAGGACAAATCTCTCCATGAGTACTGTGGGTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590258.2
3UTR CAA 90 bp TCAGAATGGCAAAACTCTTCTCAGTGTCCTCAGAAGCACCCTCGCTaGGAACGGCCTTCAGATCCTTTGGGGGAGACAGGGAGCTTGTTG +
Preference number: 2 (lower is better)
Translates to: SEWQNSSQCPQKHPR*ERPSDPLGETGSLL
Trigger: CAACAAGCTCCCTGTCTCCCCCAAAGGATCTGAAGGCCGTTCCAAGCGAGGGTGCTTCTGAGGACACTGAGAAGAGTTTTGCCATTCTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590652.5
3UTR-3UTR GCA 90 bp AGTCCCCTTGGCCAGCAGAGAGTCTGTTCACTTGGTTGGAGAGTTTTATTTGTATGGATTGGCGCCTGCTaGACACGCTACAGCTCCGGG +
Preference number: 2 (lower is better)
Translates to: SPLGQQRVCSLGWRVLFVWIGAC*TRYSSG
Trigger: CCCGGAGCTGTAGCGTGTGCAGCAGGCGCCAATCCA...TACAAATAAAACTCTCCAACCAAGTGAACAGACTCTCTGCTGGCCAAGGGGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000591906.5
ENST00000610723.4
3UTR-3UTR GCA 90 bp TTGGGTCTTGTGGAACCCCTCGCTGTGCACTGGTTGCCTCACCTCATTTGTATTGACTGGAGTCTTGACTaGCCTGTGCCTTGCTGCTCA +
Preference number: 2 (lower is better)
Translates to: LGLVEPLAVHWLPHLICIDWSLD*PVPCCS
Trigger: TGAGCAGCAAGGCACAGGGCAGTCAAGACTCCAGTC...AATACAAATGAGGTGAGGCAACCAGTGCACAGCGAGGGGTTCCACAAGACCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590258.2
3UTR-3UTR GCA 90 bp TCTCTGAACTTTGATCAACAGCCTGCCCTGGTCATCTCAGGAACTCTGGCTGATCTCACTGCTGCCCCTTaGCCTGGCTTCATGCACTTG +
Preference number: 2 (lower is better)
Translates to: SLNFDQQPALVISGTLADLTAAP*PGFMHL
Trigger: CAAGTGCATGAAGCCAGGGCAAGGGGCAGCAGTGAG...ATCAGCCAGAGTTCCTGAGATGACCAGGGCAGGCTGTTGATCAAAGTTCAGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590258.2
3UTR-3UTR CCA 90 bp CTGGAGTCCCCTTGGCCAGCAGAGAGTCTGTTCACTTGGTTGGAGAGTTTTATTCCCATGCTGTTGGATTaGCGCCTGCTGCACACGCTA +
Preference number: 2 (lower is better)
Translates to: LESPWPAESLFTWLESFIPMLLD*RLLHTL
Trigger: TAGCGTGTGCAGCAGGCGCCAATCCAACAGCATGGG...AATAAAACTCTCCAACCAAGTGAACAGACTCTCTGCTGGCCAAGGGGACTCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000591906.5
ENST00000610723.4
3UTR-3UTR TCA 90 bp TCCCATGCTGTTGGATTGGCGCCTGCTGCACACGCTACAGCTCCGGGGCTTCATACAGCCAGTTTCCAGTaGACACATTTTCTTCTATTC +
Preference number: 2 (lower is better)
Translates to: SHAVGLAPAAHATAPGLHTASFQ*THFLLF
Trigger: GAATAGAAGAAAATGTGTTCACTGGAAACTGGCTGT...ATGAAGCCCCGGAGCTGTAGCGTGTGCAGCAGGCGCCAATCCAACAGCATGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610723.4
3UTR-3UTR GCA 90 bp CGTAATAGCAGCTGCCACTGGGGATGCACACTTGGAGAACAGGGGAGTGAGAATCCTGGGTGCATGTACTaGCAACCCAGAACAAGTCAT +
Preference number: 2 (lower is better)
Translates to: RNSSCHWGCTLGEQGSENPGCMY*QPRTSH
Trigger: ATGACTTGTTCTGGGTTGGCAGTACATGCACCCAGG...ATTCTCACTCCCCTGTTCTCCAAGTGTGCATCCCCAGTGGCAGCTGCTATTACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589049.5
3UTR-3UTR CCA 90 bp ATCCTGTGGACTGCTCTTAGTTCCCCAGTGGGTTTGGAAGAGGGAAACCCTGGGATGGGTCAAAACCAGTaGTTTCTTTGGGGGACCTCT +
Preference number: 2 (lower is better)
Translates to: ILWTALSSPVGLEEGNPGMGQNQ*FLWGTS
Trigger: AGAGGTCCCCCAAAGAAACCACTGGTTTTGACCCAT...CCCAGGGTTTCCCTCTTCCAAACCCACTGGGGAACTAAGAGCAGTCCACAGGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000334295.9
3UTR-3UTR TCA 90 bp CCCTGGGCTTGGTTGGCACCTCGGAGTTGCAGCTGTGACACTCATAGGTTACTCATTAGTTCAAAAGTGTaGCACCTTTTCTGGGCAAGG +
Preference number: 2 (lower is better)
Translates to: PWAWLAPRSCSCDTHRLLISSKV*HLFWAR
Trigger: CCTTGCCCAGAAAAGGTGTCACACTTTTGAACTAAT...GAGTAACCTATGAGTGTCACAGCTGCAACTCCGAGGTGCCAACCAAGCCCAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590258.2
3UTR-3UTR TCA 90 bp AAGCCAATTCTAAGTCAGTTAAATATGAGCATCCCTCCAGTTGCCAACTGCAACGGGGGACTGGAGTCTTaGCTGCCCTGTGCCTTGCTG +
Preference number: 2 (lower is better)
Translates to: KPILSQLNMSIPPVANCNGGLES*LPCALL
Trigger: CAGCAAGGCACAGGGCAGTCAAGACTCCAGTCCCCC...GTTGCAGTTGGCAACTGGAGGGATGCTCATATTTAACTGACTTAGAATTGGCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000590258.2
3UTR-3UTR GCA 90 bp CAGGCCCAGGTGGGTGATGAGCAGGCGGTAATAGGCAGTAAAGGTGTCTGTGAGCTTTCCCACTGCCATTaGATGAATCCAGCTCAAATA +
Preference number: 2 (lower is better)
Translates to: QAQVGDEQAVIGSKGVCELSHCH*MNPAQI
Trigger: TATTTGAGCTGGATTCATGCAATGGCAGTGGGAAAG...CTCACAGACACCTTTACTGCCTATTACCGCCTGCTCATCACCCACCTGGGCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000585635.5
ENST00000591823.5
3UTR-3UTR GCA 90 bp CTTGAGCATGTCCCCAGCTATTGTTGGTCGTCTGTTGGATTTGTGAGGTTGTTGTCCTGGCAGACAGACTaGAGGGCACTTCAGCAAGAG +
Preference number: 2 (lower is better)
Translates to: LEHVPSYCWSSVGFVRLLSWQTD*RALQQE
Trigger: CTCTTGCTGAAGTGCCCTGCAGTCTGTCTGCCAGGA...CAACAACCTCACAAATCCAACAGACGACCAACAATAGCTGGGGACATGCTCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590258.2
3UTR-3UTR GCA 90 bp TTGGGTCTTGTGGAACCCCTCGCTGTGCACTGGTTGCCTCACCTCATTTGTATTTCTCCTCTTTATAAGTaGCCGCATCACTCCTCTCGG +
Preference number: 2 (lower is better)
Translates to: LGLVEPLAVHWLPHLICISPLYK*PHHSSR
Trigger: CCGAGAGGAGTGATGCGGGCACTTATAAAGAGGAGA...AATACAAATGAGGTGAGGCAACCAGTGCACAGCGAGGGGTTCCACAAGACCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590258.2
3UTR-3UTR CCA 90 bp AATGCAGTTCTAATGCTTCATGGGTCAAAACCAGTGGTTTCTTTGGGGGACCTCCAGCACAACCTGCTCTaGAGGCCTCACTACGAGCCT +
Preference number: 2 (lower is better)
Translates to: NAVLMLHGSKPVVSLGDLQHNLL*RPHYEP
Trigger: AGGCTCGTAGTGAGGCCTCCAGAGCAGGTTGTGCTG...GAGGTCCCCCAAAGAAACCACTGGTTTTGACCCATGAAGCATTAGAACTGCATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000334295.9
ENST00000383056.7
ENST00000593035.5
3UTR-3UTR CCA 90 bp AGTCCCCTTGGCCAGCAGAGAGTCTGTTCACTTGGTTGGAGAGTTTTATTTGTACCCATGCTGTTGGATTaGCGCCTGCTGCACACGCTA +
Preference number: 2 (lower is better)
Translates to: SPLGQQRVCSLGWRVLFVPMLLD*RLLHTL
Trigger: TAGCGTGTGCAGCAGGCGCCAATCCAACAGCATGGG...TACAAATAAAACTCTCCAACCAAGTGAACAGACTCTCTGCTGGCCAAGGGGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000591906.5
ENST00000610723.4
3UTR-3UTR CCA 90 bp GCCCAGGTGGGTGATGAGCAGGCGGTAATAGGCAGTAAAGGTGTCTGTGAGAAACTGGCTGATCATCACTaGCTTCATGTGTATCGTCCT +
Preference number: 2 (lower is better)
Translates to: AQVGDEQAVIGSKGVCEKLADHH*LHVYRP
Trigger: AGGACGATACACATGAAGCCAGTGATGATCAGCCAG...TTTCTCACAGACACCTTTACTGCCTATTACCGCCTGCTCATCACCCACCTGGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000585635.5
ENST00000591823.5
3UTR-3UTR CCA 90 bp GTAACACGATTTGAGAGAACCCCTCACCACATATCCCATGTCTCTCTAAAAACCAGCCCTGGGCTTGGTTaGCACCTCGGAGTTGCAGCT +
Preference number: 2 (lower is better)
Translates to: VTRFERTPHHISHVSLKTSPGLG*HLGVAA
Trigger: AGCTGCAACTCCGAGGTGCCAACCAAGCCCAGGGCT...GGTTTTTAGAGAGACATGGGATATGTGGTGAGGGGTTCTCTCAAATCGTGTTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590258.2
3UTR-3UTR CCA 90 bp TCAGGGCCCAAAGGTAGGCTTGGAAATACAGTAGTTGCAGTAACACGATTTGAGGGAAGGCATAGACCATaGGGTGTGGCCTGCAGATGC +
Preference number: 2 (lower is better)
Translates to: SGPKGRLGNTVVAVTRFEGRHRP*GVACRC
Trigger: GCATCTGCAGGCCACACCCCATGGTCTATGCCTTCC...CTCAAATCGTGTTACTGCAACTACTGTATTTCCAAGCCTACCTTTGGGCCCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590258.2
3UTR-3UTR TCA 90 bp TCCAGTGCCGTTGGCTCTTCCTTTGATCAATTCTGGCAAGAAAAATACTTCTGGAGGGACCAGGCAAAGTaGGGCTGGACAACTCAGAGC +
Preference number: 2 (lower is better)
Translates to: SSAVGSSFDQFWQEKYFWRDQAK*GWTTQS
Trigger: GCTCTGAGTTGTCCAGCCTCACTTTGCCTGGTCCCT...CCAGAAGTATTTTTCTTGCCAGAATTGATCAAAGGAAGAGCCAACGGCACTGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334295.9
3UTR-3UTR TCA 90 bp ACTCAGTTTCTAAGGTTCTCTGGAGTCCCCTTGGCCAGCAGAGAGTCTGTTCACGCCATAACTGAGGAATaGTTGCGACACTGTTGTTCC +
Preference number: 2 (lower is better)
Translates to: TQFLRFSGVPLASRESVHAITEE*LRHCCS
Trigger: GGAACAACAGTGTCGCAATCATTCCTCAGTTATGGC...GTGAACAGACTCTCTGCTGGCCAAGGGGACTCCAGAGAACCTTAGAAACTGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000591906.5
ENST00000610723.4
3UTR-3UTR GCA 90 bp TGGCCAGCAGAGAGTCTGTTCACTTGGTTGGAGAGTTTTATTTGTAGTTCTCAGTGTTGGATTGGCGCCTaGTGCACACGCTACAGCTCC +
Preference number: 2 (lower is better)
Translates to: WPAESLFTWLESFICSSQCWIGA*CTRYSS
Trigger: GGAGCTGTAGCGTGTGCAGCAGGCGCCAATCCAACA...CTGAGAACTACAAATAAAACTCTCCAACCAAGTGAACAGACTCTCTGCTGGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000591906.5
ENST00000610723.4
3UTR-3UTR GCA 90 bp TATTGTTGGTCGTCTGTTGGATTTGTGAGGTTGTTGGGTCTTGTGGAACCCCTCTCTCCAGGAGTCCCCTaGACATACCTTCTCCATCGT +
Preference number: 2 (lower is better)
Translates to: YCWSSVGFVRLLGLVEPLSPGVP*TYLLHR
Trigger: ACGATGGAGAAGGTATGTGCAGGGGACTCCTGGAGA...GAGGGGTTCCACAAGACCCAACAACCTCACAAATCCAACAGACGACCAACAATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590258.2
3UTR-3UTR CCA 90 bp TGCTTCATGGGTCAAAACCAGTGGTTTCTTTGGGGGACCTCTCTAATCAATCAGGCCTCACTACGAGCCTaGCTAATGTCGGTGGGACTA +
Preference number: 2 (lower is better)
Translates to: CFMGQNQWFLWGTSLINQASLRA*LMSVGL
Trigger: TAGTCCCACCGACATTAGCCAGGCTCGTAGTGAGGC...CTGATTGATTAGAGAGGTCCCCCAAAGAAACCACTGGTTTTGACCCATGAAGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000334295.9
ENST00000383056.7
ENST00000593035.5
3UTR-3UTR CCA 90 bp CTTGAGCATGTCCCCAGCTATTGTTGGTCGTCTGTTGGATTTGTGAGGTTGTTGCCCTCCAGGTGGGGTTaGGGAGACTTGATATTCACA +
Preference number: 2 (lower is better)
Translates to: LEHVPSYCWSSVGFVRLLPSRWG*GDLIFT
Trigger: TGTGAATATCAAGTCTCCCCAACCCCACCTGGAGGG...CAACAACCTCACAAATCCAACAGACGACCAACAATAGCTGGGGACATGCTCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590258.2
3UTR-3UTR CCA 90 bp CCAATTCCAGCCAGAATAAGTTTGGCAGTTTGCTCCTTAGCCTCCATTCCTCGAAAGGCAAGCTCTTGCTaGATGAAACCCCTCCAGGTG +
Preference number: 2 (lower is better)
Translates to: PIPARISLAVCSLASIPRKASSC*MKPLQV
Trigger: CACCTGGAGGGGTTTCATCCAGCAAGAGCTTGCCTT...TCGAGGAATGGAGGCTAAGGAGCAAACTGCCAAACTTATTCTGGCTGGAATTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590258.2
3UTR-3UTR TCA 90 bp GGGTCTTTGACTATCACATGGGGAAAGCTCAGAACCTGCACAGCCCACTCTGCATCTCACAAGATCTGCTaGTTTTATAAGGGGGTTTCC +
Preference number: 2 (lower is better)
Translates to: GSLTITWGKLRTCTAHSASHKIC*FYKGVS
Trigger: GGAAACCCCCTTATAAAATCAGCAGATCTTGTGAGA...TGCAGAGTGGGCTGTGCAGGTTCTGAGCTTTCCCCATGTGATAGTCAAAGACCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000587382.5
3UTR-3UTR TCA 90 bp TCCCAGTGGAATGATGTGCTCATCCAGCTTCACACTCCATGTCATGTGGAAGCCCAGGAAGAAATCATATaGCGTTCAGCAGGAGGCTTT +
Preference number: 2 (lower is better)
Translates to: SQWNDVLIQLHTPCHVEAQEEII*RSAGGF
Trigger: AAAGCCTCCTGCTGAACGTCATATGATTTCTTCCTG...GGCTTCCACATGACATGGAGTGTGAAGCTGGATGAGCACATCATTCCACTGGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000585635.5
ENST00000590692.5
ENST00000591823.5
3UTR-3UTR CCA 90 bp GCTTCCCAGTGGAATGATGTGCTCATCCAGCTTCACACTCCATGTCATGTGGAACACCTCAGTCACACCTaGGGAAGATTCTGGATAATC +
Preference number: 2 (lower is better)
Translates to: ASQWNDVLIQLHTPCHVEHLSHT*GRFWII
Trigger: GATTATCCAGAATCTTCCCCAGGTGTGACTGAGGTG...TTCCACATGACATGGAGTGTGAAGCTGGATGAGCACATCATTCCACTGGGAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591823.5
3UTR-3UTR CCA 90 bp CCAATTCCAGCCAGAATAAGTTTGGCAGTTTGCTCCTTAGCCTCCATTCCTCGACATTTTCCCCTGCTCTaGAATCACCTTCCCAGCTCT +
Preference number: 2 (lower is better)
Translates to: PIPARISLAVCSLASIPRHFPLL*NHLPSS
Trigger: AGAGCTGGGAAGGTGATTCCAGAGCAGGGGAAAATG...TCGAGGAATGGAGGCTAAGGAGCAAACTGCCAAACTTATTCTGGCTGGAATTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590258.2
3UTR-3UTR TCA 90 bp AGGGAAACCCTGGGTCGATTAGCAGGTAGACAGTGCAAAGGAAGGAAGTCTGGCAATCTACCAGCCACATaGATACTCAAAATGTGGCTA +
Preference number: 2 (lower is better)
Translates to: RETLGRLAGRQCKGRKSGNLPAT*ILKMWL
Trigger: TAGCCACATTTTGAGTATTCATGTGGCTGGTAGATT...GCCAGACTTCCTTCCTTTGCACTGTCTACCTGCTAATCGACCCAGGGTTTCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334295.9
3UTR-3UTR TCA 90 bp AGAAAATGCCAGTATAACGCTCTGTCCAGGAACCAGATCTCAGTGTCTTCTGCTTGCTTCCCAGTGGAATaGTGTGCTCATCCAGCTTCA +
Preference number: 2 (lower is better)
Translates to: RKCQYNALSRNQISVSSACFPVE*CAHPAS
Trigger: TGAAGCTGGATGAGCACATCATTCCACTGGGAAGCA...AGCAGAAGACACTGAGATCTGGTTCCTGGACAGAGCGTTATACTGGCATTTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585635.5
ENST00000591823.5
3UTR-3UTR GCA 90 bp TATTGTTGGTCGTCTGTTGGATTTGTGAGGTTGTTGGGTCTTGTGGAACCCCTCTGCCCTGTGCCTTGCTaGTCATACTTCCTTTTCTTC +
Preference number: 2 (lower is better)
Translates to: YCWSSVGFVRLLGLVEPLCPVPC*SYFLFF
Trigger: GAAGAAAAGGAAGTATGAGCAGCAAGGCACAGGGCA...GAGGGGTTCCACAAGACCCAACAACCTCACAAATCCAACAGACGACCAACAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590258.2
3UTR-3UTR CCA 90 bp AATGAACAATGCAGTTCTAATGCTTCATGGGTCAAAACCAGTGGTTTCTTTGGGGTCCACACGCAAAACTaGAGGTCACCCCTAGGGCCA +
Preference number: 2 (lower is better)
Translates to: NEQCSSNASWVKTSGFFGVHTQN*RSPLGP
Trigger: TGGCCCTAGGGGTGACCTCCAGTTTTGCGTGTGGAC...CCCAAAGAAACCACTGGTTTTGACCCATGAAGCATTAGAACTGCATTGTTCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000334295.9
ENST00000383056.7
ENST00000593035.5
3UTR-3UTR CCA 90 bp CCTTGGCCAGCAGAGAGTCTGTTCACTTGGTTGGAGAGTTTTATTTGTAGTTCTTTGTTCCCATGCTGTTaGATTGGCGCCTGCTGCACA +
Preference number: 2 (lower is better)
Translates to: PWPAESLFTWLESFICSSLFPCC*IGACCT
Trigger: TGTGCAGCAGGCGCCAATCCAACAGCATGGGAACAA...AGAACTACAAATAAAACTCTCCAACCAAGTGAACAGACTCTCTGCTGGCCAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000591906.5
ENST00000610723.4
3UTR-3UTR CCA 90 bp GTTTCTAAGGTTCTCTGGAGTCCCCTTGGCCAGCAGAGAGTCTGTTCACTTGGTCCTCCCATCCTGTTATaGTCAGAAACTCAGTTTCTA +
Preference number: 2 (lower is better)
Translates to: VSKVLWSPLGQQRVCSLGPPILL*SETQFL
Trigger: TAGAAACTGAGTTTCTGACCATAACAGGATGGGAGG...ACCAAGTGAACAGACTCTCTGCTGGCCAAGGGGACTCCAGAGAACCTTAGAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000590842.5
ENST00000591906.5
ENST00000610723.4
3UTR-3UTR CCA 90 bp GGGGAAAGCTCAGAACCTGCACAGCCCACTCTGCAGCTAAAATGGGTAGCAGCAAAAATTACCCAGTCTTaGGTATGTCTTTATCAGCAG +
Preference number: 2 (lower is better)
Translates to: GESSEPAQPTLQLKWVAAKITQS*VCLYQQ
Trigger: CTGCTGATAAAGACATACCCAAGACTGGGTAATTTT...TGCTGCTACCCATTTTAGCTGCAGAGTGGGCTGTGCAGGTTCTGAGCTTTCCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000587382.5
3UTR-3UTR TCA 90 bp GGGTCTTTGACTATCACATGGGGAAAGCTCAGAACCTGCACAGCCCACTCTGCAGACATATGTGATTACTaGATACTTGAAATGTGGCTG +
Preference number: 2 (lower is better)
Translates to: GSLTITWGKLRTCTAHSADICDY*ILEMWL
Trigger: CAGCCACATTTCAAGTATTCAGTAATCACATATGTC...TGCAGAGTGGGCTGTGCAGGTTCTGAGCTTTCCCCATGTGATAGTCAAAGACCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587382.5
3UTR-3UTR TCA 90 bp TTCCACAGGCTCGCCTCTTCAGAATGGCAAAACTCTTCTCAGTGTCCTCAGAAGAGACAGGGAGCTTGTTaGAGCAGACATTTGTCAAAT +
Preference number: 2 (lower is better)
Translates to: FHRLASSEWQNSSQCPQKRQGAC*SRHLSN
Trigger: ATTTGACAAATGTCTGCTTCAACAAGCTCCCTGTCT...CTTCTGAGGACACTGAGAAGAGTTTTGCCATTCTGAAGAGGCGAGCCTGTGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590652.5
3UTR-3UTR TCA 90 bp TCATGCCAAGCTAAACACAAGCCAATTCTAAGTCAGTTAAATATGAGCATCCCTCTCCCAGGAGTGTGCTaGGCAGAAGGCAAGCTCTTG +
Preference number: 2 (lower is better)
Translates to: SCQAKHKPILSQLNMSIPLPGVC*AEGKLL
Trigger: CAAGAGCTTGCCTTCTGCTCAGCACACTCCTGGGAG...AGGGATGCTCATATTTAACTGACTTAGAATTGGCTTGTGTTTAGCTTGGCATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590258.2
3UTR-3UTR TCA 90 bp ACAATGGGAATACCATCATGCCAAGCTAAACACAAGCCAATTCTAAGTCAGTTATCATCCCTTTGGGTGTaGCCTGCACCACCACTGCAG +
Preference number: 2 (lower is better)
Translates to: TMGIPSCQAKHKPILSQLSSLWV*PAPPLQ
Trigger: CTGCAGTGGTGGTGCAGGTCACACCCAAAGGGATGA...TAACTGACTTAGAATTGGCTTGTGTTTAGCTTGGCATGATGGTATTCCCATTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590258.2
3UTR-3UTR TCA 90 bp GTAACACGATTTGAGAGAACCCCTCACCACATATCCCATGTCTCTCTAAAAACCCGTCTGTTGGATTTGTaGGGTTGTTGGGTCTTGTGG +
Preference number: 2 (lower is better)
Translates to: VTRFERTPHHISHVSLKTRLLDL*GCWVLW
Trigger: CCACAAGACCCAACAACCTCACAAATCCAACAGACG...GGTTTTTAGAGAGACATGGGATATGTGGTGAGGGGTTCTCTCAAATCGTGTTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590258.2
3UTR-3UTR TCA 90 bp TCAGGGCCCAAAGGTAGGCTTGGAAATACAGTAGTTGCAGTAACACGATTTGAGACTTTCTCTGAACTTTaGTCAACAGCCTGCCCTGGT +
Preference number: 2 (lower is better)
Translates to: SGPKGRLGNTVVAVTRFETFSEL*STACPG
Trigger: ACCAGGGCAGGCTGTTGATCAAAGTTCAGAGAAAGT...CTCAAATCGTGTTACTGCAACTACTGTATTTCCAAGCCTACCTTTGGGCCCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590258.2
3UTR-3UTR TCA 90 bp TCAGGGCCCAAAGGTAGGCTTGGAAATACAGTAGTTGCAGTAACACGATTTGAGGGTATTAGTCCCCATTaGTTCTGCCATGGACATAGG +
Preference number: 2 (lower is better)
Translates to: SGPKGRLGNTVVAVTRFEGISPH*FCHGHR
Trigger: CCTATGTCCATGGCAGAATCAATGGGGACTAATACC...CTCAAATCGTGTTACTGCAACTACTGTATTTCCAAGCCTACCTTTGGGCCCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590258.2
3UTR-3UTR GCA 90 bp CTTGGAAATACAGTAGTTGCAGTAACACGATTTGAGAGAACCCCTCACCACATACCCCATGGCTTGTGTTaGCTGCTACGCATTGACTTG +
Preference number: 2 (lower is better)
Translates to: LGNTVVAVTRFERTPHHIPHGLC*LLRIDL
Trigger: CAAGTCAATGCGTAGCAGGCAACACAAGCCATGGGG...TATGTGGTGAGGGGTTCTCTCAAATCGTGTTACTGCAACTACTGTATTTCCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590258.2
3UTR-3UTR CCA 90 bp GCTAATGTCGGTGGGACTAAAAGCCTTACAATTTTGGTCATTCAACTAGAAAGAGTCCACACGCAAAACTaGAGGTCACCCCTAGGGCCA +
Preference number: 2 (lower is better)
Translates to: ANVGGTKSLTILVIQLERVHTQN*RSPLGP
Trigger: TGGCCCTAGGGGTGACCTCCAGTTTTGCGTGTGGAC...TCTTTCTAGTTGAATGACCAAAATTGTAAGGCTTTTAGTCCCACCGACATTAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000334295.9
ENST00000383056.7
ENST00000593035.5
3UTR-3UTR CCA 90 bp TCCAAAGGAACTCTTGGAAGCCCACCCTGTTCTAAGCAGGAGACTGCTTGTCCTAGCAAGAAACTTCACTaGAAACTGATGAGGAAGACA +
Preference number: 2 (lower is better)
Translates to: SKGTLGSPPCSKQETACPSKKLH*KLMRKT
Trigger: TGTCTTCCTCATCAGTTTCCAGTGAAGTTTCTTGCT...AGGACAAGCAGTCTCCTGCTTAGAACAGGGTGGGCTTCCAAGAGTTCCTTTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334295.9
3UTR-3UTR CCA 90 bp CACTGCCATTGCATGAATCCAGCTCAAATATCACACTGCGAGAGTCAAAGTGAGACACTCCATGTCATGTaGAAGCCATTGGTCATCAGG +
Preference number: 2 (lower is better)
Translates to: HCHCMNPAQISHCESQSETLHVM*KPLVIR
Trigger: CCTGATGACCAATGGCTTCCACATGACATGGAGTGT...CTCACTTTGACTCTCGCAGTGTGATATTTGAGCTGGATTCATGCAATGGCAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000585635.5
ENST00000590692.5
ENST00000591823.5
3UTR-3UTR CCA 90 bp TATTGTTGGTCGTCTGTTGGATTTGTGAGGTTGTTGGGTCTTGTGGAACCCCTCCTCGCCTCTTCAGAATaGCAAAACTCTTCTCAGTGT +
Preference number: 2 (lower is better)
Translates to: YCWSSVGFVRLLGLVEPLLASSE*QNSSQC
Trigger: ACACTGAGAAGAGTTTTGCCATTCTGAAGAGGCGAG...GAGGGGTTCCACAAGACCCAACAACCTCACAAATCCAACAGACGACCAACAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590258.2
3UTR CAA 90 bp CTGTTATGGTCAGAAACTCAGTTTCTAAGGTTCTCTGGAGTCCCCTaGGCCAGCAGAGAGTCTGTTCACTTGGTTGGAGAGTTTTATTTG +
Preference number: 2 (lower is better)
Translates to: LLWSETQFLRFSGVP*ASRESVHLVGEFYL
Trigger: CAAATAAAACTCTCCAACCAAGTGAACAGACTCTCTGCTGGCCAAGGGGACTCCAGAGAACCTTAGAAACTGAGTTTCTGACCATAACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000590842.5
ENST00000591906.5
ENST00000610723.4
3UTR-3UTR TCA 90 bp CACACACACACACACACACACACACACACACGTTTAAATGACCACACTGAATTAGCTTGCCCTGATCCTTaGAGGCTAACTCTTCACCTT +
Preference number: 2 (lower is better)
Translates to: HTHTHTHTHTRLNDHTELACPDP*RLTLHL
Trigger: AAGGTGAAGAGTTAGCCTTCAAGGATCAGGGCAAGC...TAATTCAGTGTGGTCATTTAAACGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334295.9
3UTR-3UTR TCA 90 bp AGTCCCCTTGGCCAGCAGAGAGTCTGTTCACTTGGTTGGAGAGTTTTATTTGTACATTCTTGCCATAACTaGGGAATGATTGCGACACTG +
Preference number: 2 (lower is better)
Translates to: SPLGQQRVCSLGWRVLFVHSCHN*GMIATL
Trigger: CAGTGTCGCAATCATTCCTCAGTTATGGCAAGAATG...TACAAATAAAACTCTCCAACCAAGTGAACAGACTCTCTGCTGGCCAAGGGGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000591906.5
ENST00000610723.4
3UTR-3UTR TCA 90 bp GAAGCCATTGGTCATCAGGTAAAAGTTCTTCACATCTTCAGGCATCACACAGTTCAGGAGGCTTTTCTATaGTGGTCACCTCAGTCACAC +
Preference number: 2 (lower is better)
Translates to: EAIGHQVKVLHIFRHHTVQEAFL*WSPQSH
Trigger: GTGTGACTGAGGTGACCATCATAGAAAAGCCTCCTG...AACTGTGTGATGCCTGAAGATGTGAAGAACTTTTACCTGATGACCAATGGCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000585635.5
ENST00000590692.5
ENST00000591823.5
3UTR-3UTR TCA 90 bp AAACTTTCCCACTGCCATTGCATGAATCCAGCTCAAATATCACACTGCGAGAGTACATGGAAGACTGGGTaGGCTGAGTCAGTTTTGAGA +
Preference number: 2 (lower is better)
Translates to: KLSHCHCMNPAQISHCESTWKTG*AESVLR
Trigger: TCTCAAAACTGACTCAGCTCACCCAGTCTTCCATGT...ACTCTCGCAGTGTGATATTTGAGCTGGATTCATGCAATGGCAGTGGGAAAGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000585635.5
ENST00000590692.5
ENST00000591823.5
3UTR-3UTR TCA 90 bp CCAATTCCAGCCAGAATAAGTTTGGCAGTTTGCTCCTTAGCCTCCATTCCTCGATCACATCCAACAGTTTaGAAAGGGAGAGCTCAATTC +
Preference number: 2 (lower is better)
Translates to: PIPARISLAVCSLASIPRSHPTV*KGRAQF
Trigger: GAATTGAGCTCTCCCTTTTCAAACTGTTGGATGTGA...TCGAGGAATGGAGGCTAAGGAGCAAACTGCCAAACTTATTCTGGCTGGAATTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590258.2
3UTR-3UTR CCA 90 bp AAACTTTCCCACTGCCATTGCATGAATCCAGCTCAAATATCACACTGCGAGAGTCTGGCTGATCATCACTaGCTTCATGTGTATCGTCCT +
Preference number: 2 (lower is better)
Translates to: KLSHCHCMNPAQISHCESLADHH*LHVYRP
Trigger: AGGACGATACACATGAAGCCAGTGATGATCAGCCAG...ACTCTCGCAGTGTGATATTTGAGCTGGATTCATGCAATGGCAGTGGGAAAGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000585635.5
ENST00000590692.5
ENST00000591823.5
3UTR-3UTR CCA 90 bp AAACTTTCCCACTGCCATTGCATGAATCCAGCTCAAATATCACACTGCGAGAGTAAAGTGAGGCTTCTCTaGCTGATCATCACTGGCTTC +
Preference number: 2 (lower is better)
Translates to: KLSHCHCMNPAQISHCESKVRLL*LIITGF
Trigger: GAAGCCAGTGATGATCAGCCAGAGAAGCCTCACTTT...ACTCTCGCAGTGTGATATTTGAGCTGGATTCATGCAATGGCAGTGGGAAAGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000585635.5
ENST00000590692.5
ENST00000591823.5
3UTR-3UTR CCA 90 bp ACAATGGGAATACCATCATGCCAAGCTAAACACAAGCCAATTCTAAGTCAGTTACCCCTCGCTGTGCACTaGTTGCCTCACCTCATTTGT +
Preference number: 2 (lower is better)
Translates to: TMGIPSCQAKHKPILSQLPLAVH*LPHLIC
Trigger: ACAAATGAGGTGAGGCAACCAGTGCACAGCGAGGGG...TAACTGACTTAGAATTGGCTTGTGTTTAGCTTGGCATGATGGTATTCCCATTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590258.2
3UTR-3UTR CCA 90 bp CTTCACACTCCATGTCATGTGGAAGCCATTGGTCATCAGGTAAAAGTTCTTCACAGCTTACTCCAAAGGTaGGTGCTGTCAATTCCTTCC +
Preference number: 2 (lower is better)
Translates to: LHTPCHVEAIGHQVKVLHSLLQR*VLSIPS
Trigger: GGAAGGAATTGACAGCACCCACCTTTGGAGTAAGCT...GTGAAGAACTTTTACCTGATGACCAATGGCTTCCACATGACATGGAGTGTGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585635.5
3UTR-3UTR CCA 90 bp ATGTCATGTGGAAGCCATTGGTCATCAGGTAAAAGTTCTTCACATCTTCAGGCAAGCAATCCTCTGCCCTaGCCTTCCAAAACACTGAGA +
Preference number: 2 (lower is better)
Translates to: MSCGSHWSSGKSSSHLQASNPLP*PSKTLR
Trigger: TCTCAGTGTTTTGGAAGGCCAGGGCAGAGGATTGCT...TGCCTGAAGATGTGAAGAACTTTTACCTGATGACCAATGGCTTCCACATGACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587207.1
3UTR CAA 90 bp GTCTTGGAGAAGCAGCCAAATGCTAGAATCTCCTATCCAGTGCCGTaGGCTCTTCCTTTGATCAATTCTGGCAAGAAAAATACTTCTGGA +
Preference number: 2 (lower is better)
Translates to: VLEKQPNARISYPVP*ALPLINSGKKNTSG
Trigger: TCCAGAAGTATTTTTCTTGCCAGAATTGATCAAAGGAAGAGCCAACGGCACTGGATAGGAGATTCTAGCATTTGGCTGCTTCTCCAAGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334295.9
3UTR-3UTR TCA 90 bp TCCAGTGCCGTTGGCTCTTCCTTTGATCAATTCTGGCAAGAAAAATACTTCTGGTCAGTGCTAAGGGATTaGGGGTTGAGTGTTGAAGAA +
Preference number: 2 (lower is better)
Translates to: SSAVGSSFDQFWQEKYFWSVLRD*GLSVEE
Trigger: TTCTTCAACACTCAACCCTCAATCCCTTAGCACTGA...CCAGAAGTATTTTTCTTGCCAGAATTGATCAAAGGAAGAGCCAACGGCACTGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334295.9
3UTR-3UTR TCA 90 bp TGGCCAGCAGAGAGTCTGTTCACTTGGTTGGAGAGTTTTATTTGTAGTTCTCAGCATTCTTGCCATAACTaGGGAATGATTGCGACACTG +
Preference number: 2 (lower is better)
Translates to: WPAESLFTWLESFICSSQHSCHN*GMIATL
Trigger: CAGTGTCGCAATCATTCCTCAGTTATGGCAAGAATG...CTGAGAACTACAAATAAAACTCTCCAACCAAGTGAACAGACTCTCTGCTGGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000591906.5
ENST00000610723.4
3UTR-3UTR GCA 90 bp TCATGCCAAGCTAAACACAAGCCAATTCTAAGTCAGTTAAATATGAGCATCCCTTTGGCACCTCGGAGTTaGAGCTGTGACACTCATAGG +
Preference number: 2 (lower is better)
Translates to: SCQAKHKPILSQLNMSIPLAPRS*SCDTHR
Trigger: CCTATGAGTGTCACAGCTGCAACTCCGAGGTGCCAA...AGGGATGCTCATATTTAACTGACTTAGAATTGGCTTGTGTTTAGCTTGGCATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590258.2
3UTR-3UTR GCA 90 bp GTAACACGATTTGAGAGAACCCCTCACCACATATCCCATGTCTCTCTAAAAACCTCGCTGTGCACTGGTTaGCTCACCTCATTTGTATTA +
Preference number: 2 (lower is better)
Translates to: VTRFERTPHHISHVSLKTSLCTG*LTSFVL
Trigger: TAATACAAATGAGGTGAGGCAACCAGTGCACAGCGA...GGTTTTTAGAGAGACATGGGATATGTGGTGAGGGGTTCTCTCAAATCGTGTTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590258.2
3UTR CAA 90 bp CAGCCAAATGCTAGAATCTCCTATCCAGTGCCGTTGGCTCTTCCTTaGATCAATTCTGGCAAGAAAAATACTTCTGGAAGACTAAACTCC +
Preference number: 2 (lower is better)
Translates to: QPNARISYPVPLALP*INSGKKNTSGRLNS
Trigger: GGAGTTTAGTCTTCCAGAAGTATTTTTCTTGCCAGAATTGATCAAAGGAAGAGCCAACGGCACTGGATAGGAGATTCTAGCATTTGGCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334295.9
3UTR-3UTR TCA 90 bp TCCATGTCATGTGGAAGCCATTGGTCATCAGGTAAAAGTTCTTCACATCTTCAGCAGGAAGAAATCATATaGCGTTCAGCAGGAGGCTTT +
Preference number: 2 (lower is better)
Translates to: SMSCGSHWSSGKSSSHLQQEEII*RSAGGF
Trigger: AAAGCCTCCTGCTGAACGTCATATGATTTCTTCCTG...CTGAAGATGTGAAGAACTTTTACCTGATGACCAATGGCTTCCACATGACATGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000585635.5
ENST00000590692.5
ENST00000591823.5
3UTR-3UTR CCA 90 bp CAGGTAAAAGTTCTTCACATCTTCAGGCATCACACAGTTATTCTTTTGTTCCCACACCTCAGTCACACCTaGGGAAGATTCTGGAAGAGA +
Preference number: 2 (lower is better)
Translates to: QVKVLHIFRHHTVILLFPHLSHT*GRFWKR
Trigger: TCTCTTCCAGAATCTTCCCCAGGTGTGACTGAGGTG...TGGGAACAAAAGAATAACTGTGTGATGCCTGAAGATGTGAAGAACTTTTACCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590692.5
3UTR-3UTR CCA 90 bp AAACTTTCCCACTGCCATTGCATGAATCCAGCTCAAATATCACACTGCGAGAGTACCTGGGGAAGATTCTaGATAATCTTGCTTTTGCCA +
Preference number: 2 (lower is better)
Translates to: KLSHCHCMNPAQISHCESTWGRF*IILLLP
Trigger: TGGCAAAAGCAAGATTATCCAGAATCTTCCCCAGGT...ACTCTCGCAGTGTGATATTTGAGCTGGATTCATGCAATGGCAGTGGGAAAGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591823.5
3UTR-3UTR CCA 90 bp TCTCTGAACTTTGATCAACAGCCTGCCCTGGTCATCTCAGGAACTCTGGCTGATAAACTTTTATTCTTCTaGGAACAGGACCTTAAACAG +
Preference number: 2 (lower is better)
Translates to: SLNFDQQPALVISGTLADKLLFF*EQDLKQ
Trigger: CTGTTTAAGGTCCTGTTCCCAGAAGAATAAAAGTTT...ATCAGCCAGAGTTCCTGAGATGACCAGGGCAGGCTGTTGATCAAAGTTCAGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590258.2
3UTR-3UTR CCA 90 bp TGTGGAAGCCATTGGTCATCAGGTAAAAGTTCTTCACATCTTCAGGCATCACACCACCTCAGTCACACCTaGGGAAGATTATCTTTAGAT +
Preference number: 2 (lower is better)
Translates to: CGSHWSSGKSSSHLQASHHLSHT*GRLSLD
Trigger: ATCTAAAGATAATCTTCCCCAGGTGTGACTGAGGTG...GTGTGATGCCTGAAGATGTGAAGAACTTTTACCTGATGACCAATGGCTTCCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585635.5
3UTR-3UTR TCA 90 bp AATGAACAATGCAGTTCTAATGCTTCATGGGTCAAAACCAGTGGTTTCTTTGGGTCAGTGCTAAGGGATTaGGGGTTGAGTGTTGAAGAA +
Preference number: 2 (lower is better)
Translates to: NEQCSSNASWVKTSGFFGSVLRD*GLSVEE
Trigger: TTCTTCAACACTCAACCCTCAATCCCTTAGCACTGA...CCCAAAGAAACCACTGGTTTTGACCCATGAAGCATTAGAACTGCATTGTTCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334295.9
ENST00000383056.7
ENST00000593035.5
3UTR-3UTR TCA 90 bp TCCAGTGCCGTTGGCTCTTCCTTTGATCAATTCTGGCAAGAAAAATACTTCTGGCAGAACTTTCTGTGGTaGTGGAAATGTTCCATATCT +
Preference number: 2 (lower is better)
Translates to: SSAVGSSFDQFWQEKYFWQNFLW*WKCSIS
Trigger: AGATATGGAACATTTCCATCACCACAGAAAGTTCTG...CCAGAAGTATTTTTCTTGCCAGAATTGATCAAAGGAAGAGCCAACGGCACTGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334295.9
3UTR-3UTR TCA 90 bp TCCAGTGCCGTTGGCTCTTCCTTTGATCAATTCTGGCAAGAAAAATACTTCTGGGAAGGCGCTTTCTCATaGATATCTATCACTATTGTC +
Preference number: 2 (lower is better)
Translates to: SSAVGSSFDQFWQEKYFWEGAFS*ISITIV
Trigger: GACAATAGTGATAGATATTCATGAGAAAGCGCCTTC...CCAGAAGTATTTTTCTTGCCAGAATTGATCAAAGGAAGAGCCAACGGCACTGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334295.9
3UTR-3UTR GCA 90 bp ACAATGGGAATACCATCATGCCAAGCTAAACACAAGCCAATTCTAAGTCAGTTAATGGCTTGTGTTGCCTaGTACGCATTGACTTGGATC +
Preference number: 2 (lower is better)
Translates to: TMGIPSCQAKHKPILSQLMACVA*YALTWI
Trigger: GATCCAAGTCAATGCGTAGCAGGCAACACAAGCCAT...TAACTGACTTAGAATTGGCTTGTGTTTAGCTTGGCATGATGGTATTCCCATTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590258.2
3UTR-3UTR GCA 90 bp CATTGGTCATCAGGTAAAAGTTCTTCACATCTTCAGGCATCACACAGTTATTCTTACTCCAAAGGTGGGTaGTGTCAATTCCTTCCTTCC +
Preference number: 2 (lower is better)
Translates to: HWSSGKSSSHLQASHSYSYSKGG*CQFLPS
Trigger: GGAAGGAAGGAATTGACAGCACCCACCTTTGGAGTA...AGAATAACTGTGTGATGCCTGAAGATGTGAAGAACTTTTACCTGATGACCAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585635.5
3UTR-3UTR CCA 90 bp GTGCCGTTGGCTCTTCCTTTGATCAATTCTGGCAAGAAAAATACTTCTGGAAGAAACCAGTGGTTTCTTTaGGGGACCTCTCTAATCAAT +
Preference number: 2 (lower is better)
Translates to: VPLALPLINSGKKNTSGRNQWFL*GTSLIN
Trigger: ATTGATTAGAGAGGTCCCCCAAAGAAACCACTGGTT...TCTTCCAGAAGTATTTTTCTTGCCAGAATTGATCAAAGGAAGAGCCAACGGCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334295.9
3UTR CAA 90 bp TTCTCAATAAATCATTTGTTGGTTGACCAATTGATGGATATTATGTaGACCCCTGTTCCAAGTGCTGATTCCTGGAAGAGAAGGAGCCCT +
Preference number: 2 (lower is better)
Translates to: FSINHLLVDQLMDIM*TPVPSADSWKRRSP
Trigger: AGGGCTCCTTCTCTTCCAGGAATCAGCACTTGGAACAGGGGTCAACATAATATCCATCAATTGGTCAACCAACAAATGATTTATTGAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590258.2
3UTR-3UTR TCA 90 bp GTGCCGTTGGCTCTTCCTTTGATCAATTCTGGCAAGAAAAATACTTCTGGAAGAAAGCTGCAAAAGAAATaGGCAGAGCGAGATATTTGT +
Preference number: 2 (lower is better)
Translates to: VPLALPLINSGKKNTSGRKLQKK*AERDIC
Trigger: ACAAATATCTCGCTCTGCTCATTTCTTTTGCAGCTT...TCTTCCAGAAGTATTTTTCTTGCCAGAATTGATCAAAGGAAGAGCCAACGGCAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334295.9
3UTR-3UTR GCA 90 bp ACTGCCAACCCAGAACAAGTCATGGGACATAAACTATCCAACAGAATTTCATTAGGGAAGTTGGGAACCTaGAATGTAACCATTTCCTCA +
Preference number: 2 (lower is better)
Translates to: TANPEQVMGHKLSNRISLGKLGT*NVTISS
Trigger: TGAGGAAATGGTTACATTGCAGGTTCCCAACTTCCC...TAATGAAATTCTGTTGGATAGTTTATGTCCCATGACTTGTTCTGGGTTGGCAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589049.5
3UTR-3UTR CCA 90 bp CAAATATTAAGCATATGTGGGCTAGAGGTTCCCCCATATGTCAATGGGAAAATGGCACTCAGACTTATTTaGGCACTTACACAAGATTCC +
Preference number: 2 (lower is better)
Translates to: QILSICGLEVPPYVNGKMALRLI*ALTQDS
Trigger: GGAATCTTGTGTAAGTGCCCAAATAAGTCTGAGTGC...CATTTTCCCATTGACATATGGGGGAACCTCTAGCCCACATATGCTTAATATTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334295.9
3UTR-3UTR CCA 90 bp TCATGGAAGATGGGGTATCCATCCCCTCAAACATTTATCCTTTGTGTGAGAAATAGAAACTATGTGATATaGTTTGGCTGTGTCCCTACC +
Preference number: 2 (lower is better)
Translates to: SWKMGYPSPQTFILCVRNRNYVI*FGCVPT
Trigger: GGTAGGGACACAGCCAAACCATATCACATAGTTTCT...ATTTCTCACACAAAGGATAAATGTTTGAGGGGATGGATACCCCATCTTCCATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587382.5
3UTR-3UTR TCA 90 bp GATGGAAATGTTCCATATCTTTGTGCTAATACAGAATCTACCAGCCACATGAATGTGACTAGTGGCTCCTaGATGAACAATGCAGTTCTA +
Preference number: 2 (lower is better)
Translates to: DGNVPYLCANTESTSHMNVTSGS*MNNAVL
Trigger: TAGAACTGCATTGTTCATTCAGGAGCCACTAGTCAC...ATTCATGTGGCTGGTAGATTCTGTATTAGCACAAAGATATGGAACATTTCCATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334295.9
ENST00000383056.7
ENST00000593035.5
3UTR-3UTR CCA 90 bp ACTGCCAACCCAGAACAAGTCATGGGACATAAACTATCCAACAGAATTTCATTAAGTGAGGCTGTCCATTaGAATCATCTGTCTTGCTTA +
Preference number: 2 (lower is better)
Translates to: TANPEQVMGHKLSNRISLSEAVH*NHLSCL
Trigger: TAAGCAAGACAGATGATTCCAATGGACAGCCTCACT...TAATGAAATTCTGTTGGATAGTTTATGTCCCATGACTTGTTCTGGGTTGGCAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589049.5
3UTR-3UTR CCA 90 bp TCACACTCCATGTCATGTGGAAGCCATTGGTCATCAGGTAAAAGTTCTTCACATTCTTTAGATATGCCGTaGATTAAAACTCTCTGTGGT +
Preference number: 2 (lower is better)
Translates to: SHSMSCGSHWSSGKSSSHSLDMP*IKTLCG
Trigger: ACCACAGAGAGTTTTAATCCACGGCATATCTAAAGA...ATGTGAAGAACTTTTACCTGATGACCAATGGCTTCCACATGACATGGAGTGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585635.5
3UTR-3UTR CCA 90 bp GATGGAAATGTTCCATATCTTTGTGCTAATACAGAATCTACCAGCCACATGAATGCACTCAGACTTATTTaGGCACTTACACAAGATTCC +
Preference number: 2 (lower is better)
Translates to: DGNVPYLCANTESTSHMNALRLI*ALTQDS
Trigger: GGAATCTTGTGTAAGTGCCCAAATAAGTCTGAGTGC...ATTCATGTGGCTGGTAGATTCTGTATTAGCACAAAGATATGGAACATTTCCATC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334295.9
ENST00000383056.7
ENST00000593035.5
3UTR CAA 90 bp CGAGATATTTGTGGTAAGGGATACAAAGAACATACAATTGTGTACTaGAGAGGTTTCATGGAACATTATGACCCATCCAATGAAGACATC +
Preference number: 2 (lower is better)
Translates to: RDICGKGYKEHTIVY*RGFMEHYDPSNEDI
Trigger: GATGTCTTCATTGGATGGGTCATAATGTTCCATGAAACCTCTCAAGTACACAATTGTATGTTCTTTGTATCCCTTACCACAAATATCTCG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334295.9
ENST00000383056.7
ENST00000593035.5
3UTR-3UTR CAA 90 bp GTGCGAAGAACCCTGAAGAGCGGCCTGACCCCAGAAGAAGCCAGAGCCCTGGGCCTGCTACGCATTGACTaGGATCTCCAGGAGTCCCCT +
Preference number: 3 (lower is better)
Translates to: VRRTLKSGLTPEEARALGLLRID*DLQESP
Trigger: AGGGGACTCCTGGAGATCCAAGTCAATGCGTAGCAG...GCCCAGGGCTCTGGCTTCTTCTGGGGTCAGGCCGCTCTTCAGGGTTCTTCGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590258.2
3UTR TCA 72 bp TGCTGCACACGCTACAGCTCCGGGGCTTCATGCTGCTaGCTCTTTGCTTGTGGCCAGTCCCCATGCCTGCAG +
Preference number: 3 (lower is better)
Translates to: CCTRYSSGASCC*LFACGQSPCLQ
Trigger: CTGCAGGCATGGGGACTGGCCACAAGCAAAGAGTCAGCAGCATGAAGCCCCGGAGCTGTAGCGTGTGCAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610723.4
3UTR GCA 72 bp GCTGCTGACTCTTTGCTTGTGGCCAGTCCCCATGCCTaGAGAGACACAGCTCCTCAGCTCCCATTGGAGGGG +
Preference number: 3 (lower is better)
Translates to: AADSLLVASPHA*RDTAPQLPLEG
Trigger: CCCCTCCAATGGGAGCTGAGGAGCTGTGTCTCTGCAGGCATGGGGACTGGCCACAAGCAAAGAGTCAGCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610723.4
3UTR GCA 72 bp GCGACACTGTTGTTCCCATGCTGTTGGATTGGCGCCTaGTGCACACGCTACAGCTCCGGGGCTTCATGCTGC +
Preference number: 3 (lower is better)
Translates to: ATLLFPCCWIGA*CTRYSSGASCC
Trigger: GCAGCATGAAGCCCCGGAGCTGTAGCGTGTGCAGCAGGCGCCAATCCAACAGCATGGGAACAACAGTGTCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610723.4
3UTR GCA 72 bp TCCCCATTGCTTCCAGAGGCAGGGGACAGCACAACCTaGTCTGGAGGCCTCACTACGAGCCTGGCTAATGTC +
Preference number: 3 (lower is better)
Translates to: SPLLPEAGDSTT*SGGLTTSLANV
Trigger: GACATTAGCCAGGCTCGTAGTGAGGCCTCCAGAGCAGGTTGTGCTGTCCCCTGCCTCTGGAAGCAATGGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334295.9
ENST00000383056.7
ENST00000593035.5
3UTR CCA 72 bp GAGGCTGGGGCTGCCTTGGGGTCTTTGACTATCACATaGGGAAAGCTCAGAACCTGCACAGCCCACTCTGCA +
Preference number: 3 (lower is better)
Translates to: EAGAALGSLTIT*GKLRTCTAHSA
Trigger: TGCAGAGTGGGCTGTGCAGGTTCTGAGCTTTCCCCATGTGATAGTCAAAGACCCCAAGGCAGCCCCAGCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587382.5
3UTR-3UTR CAA 90 bp AGGGAAACCCTGGGTCGATTAGCAGGTAGACAGTGCAAAGGAAGGAAGTCTGGCTCCCCACTTTCCCTGTaGGGAAGCAGGGTGAAGGCC +
Preference number: 3 (lower is better)
Translates to: RETLGRLAGRQCKGRKSGSPLSL*GSRVKA
Trigger: GGCCTTCACCCTGCTTCCCAACAGGGAAAGTGGGGA...GCCAGACTTCCTTCCTTTGCACTGTCTACCTGCTAATCGACCCAGGGTTTCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334295.9
3UTR TCA 72 bp CAGGGCACTTCAGCAAGAGCAGGAAGGTACAGAGTGTaGACCCTCTGGCTTCTCTGGAAGTCCCTGGGGAGA +
Preference number: 3 (lower is better)
Translates to: QGTSARAGRYRV*TLWLLWKSLGR
Trigger: TCTCCCCAGGGACTTCCAGAGAAGCCAGAGGGTTCACACTCTGTACCTTCCTGCTCTTGCTGAAGTGCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590258.2
3UTR GCA 72 bp GATCCTGCACTGAGTGGAGTCAGTCCTGCTCTTCCCTaGTCACTCCTTCTGAGGCAGGTCTTGAGCCTTTCC +
Preference number: 3 (lower is better)
Translates to: DPALSGVSPALP*SLLLRQVLSLS
Trigger: GGAAAGGCTCAAGACCTGCCTCAGAAGGAGTGAGCAGGGAAGAGCAGGACTGACTCCACTCAGTGCAGGATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334295.9
3UTR GCA 72 bp CTCAATTCCCAGCGTCACCCCATGGCTTGTGTTGCCTaGTACGCATTGACTTGGATCTCCAGGAGTCCCCTG +
Preference number: 3 (lower is better)
Translates to: LNSQRHPMACVA*YALTWISRSPL
Trigger: CAGGGGACTCCTGGAGATCCAAGTCAATGCGTAGCAGGCAACACAAGCCATGGGGTGACGCTGGGAATTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590258.2
3UTR CCA 72 bp AATGATTGCGACACTGTTGTTCCCATGCTGTTGGATTaGCGCCTGCTGCACACGCTACAGCTCCGGGGCTTC +
Preference number: 3 (lower is better)
Translates to: NDCDTVVPMLLD*RLLHTLQLRGF
Trigger: GAAGCCCCGGAGCTGTAGCGTGTGCAGCAGGCGCCAATCCAACAGCATGGGAACAACAGTGTCGCAATCATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610723.4
3UTR-3UTR CAA 90 bp TCCCTGCTCACTCCTTCTGAGGCAGGTCTTGAGCCTTTCCTTATCATAACCCCCAGTTCCCCAGTGGGTTaGGAAGAGGGAAACCCTGGG +
Preference number: 3 (lower is better)
Translates to: SLLTPSEAGLEPFLIITPSSPVG*EEGNPG
Trigger: CCCAGGGTTTCCCTCTTCCAAACCCACTGGGGAACT...GGGGGTTATGATAAGGAAAGGCTCAAGACCTGCCTCAGAAGGAGTGAGCAGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334295.9
3UTR TCA 72 bp AGCGTCACCCCATGGCTTGTGTTGCCTGCTACGCATTaGCTTGGATCTCCAGGAGTCCCCTGCACATACCTT +
Preference number: 3 (lower is better)
Translates to: SVTPWLVLPATH*LGSPGVPCTYL
Trigger: AAGGTATGTGCAGGGGACTCCTGGAGATCCAAGTCAATGCGTAGCAGGCAACACAAGCCATGGGGTGACGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590258.2
3UTR CCA 72 bp CACCCCATGGCTTGTGTTGCCTGCTACGCATTGACTTaGATCTCCAGGAGTCCCCTGCACATACCTTCTCCA +
Preference number: 3 (lower is better)
Translates to: HPMACVACYALT*ISRSPLHIPSP
Trigger: TGGAGAAGGTATGTGCAGGGGACTCCTGGAGATCCAAGTCAATGCGTAGCAGGCAACACAAGCCATGGGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590258.2
3UTR GCA 72 bp CTGTGTAGCCCCAAACTTTTGTCCTGGCAGACAGACTaGAGGGCACTTCAGCAAGAGCAGGAAGGTACAGAG +
Preference number: 3 (lower is better)
Translates to: LCSPKLLSWQTD*RALQQEQEGTE
Trigger: CTCTGTACCTTCCTGCTCTTGCTGAAGTGCCCTGCAGTCTGTCTGCCAGGACAAAAGTTTGGGGCTACACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590258.2
3UTR CCA 72 bp TCAACTAGAAAGAGGCCTACGGTCCACACGCAAAACTaGAGGTCACCCCTAGGGCCATCTGTGCATGGAAAC +
Preference number: 3 (lower is better)
Translates to: STRKRPTVHTQN*RSPLGPSVHGN
Trigger: GTTTCCATGCACAGATGGCCCTAGGGGTGACCTCCAGTTTTGCGTGTGGACCGTAGGCCTCTTTCTAGTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334295.9
ENST00000383056.7
ENST00000593035.5
3UTR CCA 72 bp GGAATCACCTTCCCAGCTCTGATACACTCCTCATACTaGGTAGATGCTGAGGTCTCTCCTGCCCTCTGCACT +
Preference number: 3 (lower is better)
Translates to: GITFPALIHSSY*VDAEVSPALCT
Trigger: AGTGCAGAGGGCAGGAGAGACCTCAGCATCTACCCAGTATGAGGAGTGTATCAGAGCTGGGAAGGTGATTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590258.2
3UTR-3UTR CAA 90 bp TTGAGTGACACCGCTGACCTCCTGGTTCCTCCGCTGCTTCACTTGTGGAATCCACTTCCAAAGGAACTCTaGGAAGCCCACCCTGTTCTA +
Preference number: 3 (lower is better)
Translates to: LSDTADLLVPPLLHLWNPLPKEL*EAHPVL
Trigger: TAGAACAGGGTGGGCTTCCAAGAGTTCCTTTGGAAG...TGGATTCCACAAGTGAAGCAGCGGAGGAACCAGGAGGTCAGCGGTGTCACTCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334295.9
3UTR-3UTR CAA 90 bp CTGGAGTCCCCTTGGCCAGCAGAGAGTCTGTTCACTTGGTTGGAGAGTTTTATTGTTGTTCCCATGCTGTaGGATTGGCGCCTGCTGCAC +
Preference number: 3 (lower is better)
Translates to: LESPWPAESLFTWLESFIVVPML*DWRLLH
Trigger: GTGCAGCAGGCGCCAATCCAACAGCATGGGAACAAC...AATAAAACTCTCCAACCAAGTGAACAGACTCTCTGCTGGCCAAGGGGACTCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000591906.5
ENST00000610723.4
3UTR-3UTR CAA 90 bp GCGACACTGTTGTTCCCATGCTGTTGGATTGGCGCCTGCTGCACACGCTACAGCATGATTGCGACACTGTaGTTCCCATGCTGTTGGATT +
Preference number: 3 (lower is better)
Translates to: ATLLFPCCWIGACCTRYSMIATL*FPCCWI
Trigger: AATCCAACAGCATGGGAACAACAGTGTCGCAATCAT...GCTGTAGCGTGTGCAGCAGGCGCCAATCCAACAGCATGGGAACAACAGTGTCGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000591906.5
ENST00000610723.4
3UTR-3UTR CAA 90 bp TTCTCTGGAGTCCCCTTGGCCAGCAGAGAGTCTGTTCACTTGGTTGGAGAGTTTCATGCTGCTGACTCTTaGCTTGTGGCCAGTCCCCAT +
Preference number: 3 (lower is better)
Translates to: FSGVPLASRESVHLVGEFHAADS*LVASPH
Trigger: ATGGGGACTGGCCACAAGCAAAGAGTCAGCAGCATG...AAACTCTCCAACCAAGTGAACAGACTCTCTGCTGGCCAAGGGGACTCCAGAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610723.4
3UTR TCA 72 bp ATGTCCCCAGCTATTGTTGGTCGTCTGTTGGATTTGTaGGGTTGTTGGGTCTTGTGGAACCCCTCGCTGTGC +
Preference number: 3 (lower is better)
Translates to: MSPAIVGRLLDL*GCWVLWNPSLC
Trigger: GCACAGCGAGGGGTTCCACAAGACCCAACAACCTCACAAATCCAACAGACGACCAACAATAGCTGGGGACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590258.2
3UTR GCA 72 bp CTCTCATTCTCTCTTTGCCTGCCACCATGTAAGATGTaGCTTTCGCCTTCTGCCGTGATTGTGAGGCCTCTC +
Preference number: 3 (lower is better)
Translates to: LSFSLCLPPCKM*LSPSAVIVRPL
Trigger: GAGAGGCCTCACAATCACGGCAGAAGGCGAAAGGCACATCTTACATGGTGGCAGGCAAAGAGAGAATGAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587382.5
3UTR GCA 72 bp CAGCCACCAATTCCAGCCAGAATAAGTTTGGCAGTTTaGTCCTTAGCCTCCATTCCTCGAGGAGCCACTGGT +
Preference number: 3 (lower is better)
Translates to: QPPIPARISLAV*SLASIPRGATG
Trigger: ACCAGTGGCTCCTCGAGGAATGGAGGCTAAGGAGCAAACTGCCAAACTTATTCTGGCTGGAATTGGTGGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590258.2
3UTR CCA 72 bp GAATCCTGTGGACTGCTCTTAGTTCCCCAGTGGGTTTaGAAGAGGGAAACCCTGGGTCGATTAGCAGGTAGA +
Preference number: 3 (lower is better)
Translates to: ESCGLLLVPQWV*KRETLGRLAGR
Trigger: TCTACCTGCTAATCGACCCAGGGTTTCCCTCTTCCAAACCCACTGGGGAACTAAGAGCAGTCCACAGGATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334295.9
3UTR CCA 72 bp TGTGGAGAATCCTGTGGACTGCTCTTAGTTCCCCAGTaGGTTTGGAAGAGGGAAACCCTGGGTCGATTAGCA +
Preference number: 3 (lower is better)
Translates to: CGESCGLLLVPQ*VWKRETLGRLA
Trigger: TGCTAATCGACCCAGGGTTTCCCTCTTCCAAACCCACTGGGGAACTAAGAGCAGTCCACAGGATTCTCCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334295.9
3UTR CCA 72 bp AAGGGCGTACAGGAAACTCGTAATAGCAGCTGCCACTaGGGATGCACACTTGGAGAACAGGGGAGTGAGAAT +
Preference number: 3 (lower is better)
Translates to: KGVQETRNSSCH*GCTLGEQGSEN
Trigger: ATTCTCACTCCCCTGTTCTCCAAGTGTGCATCCCCAGTGGCAGCTGCTATTACGAGTTTCCTGTACGCCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589049.5
3UTR CCA 72 bp AGGTTGTTGGGTCTTGTGGAACCCCTCGCTGTGCACTaGTTGCCTCACCTCATTTGTATTAGTGGAGCTTGC +
Preference number: 3 (lower is better)
Translates to: RLLGLVEPLAVH*LPHLICISGAC
Trigger: GCAAGCTCCACTAATACAAATGAGGTGAGGCAACCAGTGCACAGCGAGGGGTTCCACAAGACCCAACAACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590258.2
3UTR-3UTR CAA 90 bp AGTCCCCTTGGCCAGCAGAGAGTCTGTTCACTTGGTTGGAGAGTTTTATTTGTAGTTGTTCCCATGCTGTaGGATTGGCGCCTGCTGCAC +
Preference number: 3 (lower is better)
Translates to: SPLGQQRVCSLGWRVLFVVVPML*DWRLLH
Trigger: GTGCAGCAGGCGCCAATCCAACAGCATGGGAACAAC...TACAAATAAAACTCTCCAACCAAGTGAACAGACTCTCTGCTGGCCAAGGGGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000591906.5
ENST00000610723.4
3UTR-3UTR CAA 90 bp TCTCTGAACTTTGATCAACAGCCTGCCCTGGTCATCTCAGGAACTCTGGCTGATTTTCTTCTCATCCCTTaGGGTGTGACCTGCACCACC +
Preference number: 3 (lower is better)
Translates to: SLNFDQQPALVISGTLADFLLIP*GVTCTT
Trigger: GGTGGTGCAGGTCACACCCAAAGGGATGAGAAGAAA...ATCAGCCAGAGTTCCTGAGATGACCAGGGCAGGCTGTTGATCAAAGTTCAGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590258.2
3UTR TCA 72 bp TGGTTCCTCCGCTGCTTCACTTGTGGAATCCAGGGCTaGTTTAGAAATGCTGTGATTCGGGGGATCTCCAAG +
Preference number: 3 (lower is better)
Translates to: WFLRCFTCGIQG*FRNAVIRGISK
Trigger: CTTGGAGATCCCCCGAATCACAGCATTTCTAAATCAGCCCTGGATTCCACAAGTGAAGCAGCGGAGGAACCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334295.9
3UTR TCA 72 bp TTTGTCCACAGGCTGAGTGAGCTTATATTTAGGGGATaGTGGGAAGGCATAGACCATGGGGTGTGGCCTGCA +
Preference number: 3 (lower is better)
Translates to: FVHRLSELIFRG*WEGIDHGVWPA
Trigger: TGCAGGCCACACCCCATGGTCTATGCCTTCCCATCATCCCCTAAATATAAGCTCACTCAGCCTGTGGACAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590258.2
3UTR CCA 72 bp ACAGCACAACCTGCTCTGGAGGCCTCACTACGAGCCTaGCTAATGTCGGTGGGACTAAAAGCCTTACAATTT +
Preference number: 3 (lower is better)
Translates to: TAQPALEASLRA*LMSVGLKALQF
Trigger: AAATTGTAAGGCTTTTAGTCCCACCGACATTAGCCAGGCTCGTAGTGAGGCCTCCAGAGCAGGTTGTGCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334295.9
ENST00000383056.7
ENST00000593035.5
3UTR CCA 72 bp AGGCTAACTCTTCACCTTGGTTTTCCTCAGGGGCTATaGAAAGTGGTAGGTGGAGGAGATATCGAAGGCGCT +
Preference number: 3 (lower is better)
Translates to: RLTLHLGFPQGL*KVVGGGDIEGA
Trigger: AGCGCCTTCGATATCTCCTCCACCTACCACTTTCCATAGCCCCTGAGGAAAACCAAGGTGAAGAGTTAGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334295.9
3UTR CCA 72 bp GTTGTGGGAGGGACCCAGTGGGAGATAACTGAATCATaGGGATGGTTTCCACCCTACTGTTCTCATGGTAGT +
Preference number: 3 (lower is better)
Translates to: VVGGTQWEITES*GWFPPYCSHGS
Trigger: ACTACCATGAGAACAGTAGGGTGGAAACCATCCCCATGATTCAGTTATCTCCCACTGGGTCCCTCCCACAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587382.5
3UTR CCA 72 bp TTACAATGGCAGGTGTTCCTCCCTTACCTTGGCCTGTaGGCTAATGCCATAGCTGGTGAAGGCATATTGCCA +
Preference number: 3 (lower is better)
Translates to: LQWQVFLPYLGL*ANAIAGEGILP
Trigger: TGGCAATATGCCTTCACCAGCTATGGCATTAGCCCACAGGCCAAGGTAAGGGAGGAACACCTGCCATTGTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591823.5
3UTR-3UTR CAA 90 bp CCCTGGGCTTGGTTGGCACCTCGGAGTTGCAGCTGTGACACTCATAGGTTACTCTTCACATCCAACAGTTaGAAAAGGGAGAGCTCAATT +
Preference number: 3 (lower is better)
Translates to: PWAWLAPRSCSCDTHRLLFTSNS*KRESSI
Trigger: AATTGAGCTCTCCCTTTTCAAACTGTTGGATGTGAA...GAGTAACCTATGAGTGTCACAGCTGCAACTCCGAGGTGCCAACCAAGCCCAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590258.2
3UTR GCA 72 bp TATTTGGGCACTTACACAAGATTCCAAATTCCCCATTaGTTCCAGAGGCAGGGGACAGCACAACCTGCTCTG +
Preference number: 3 (lower is better)
Translates to: YLGTYTRFQIPH*FQRQGTAQPAL
Trigger: CAGAGCAGGTTGTGCTGTCCCCTGCCTCTGGAAGCAATGGGGAATTTGGAATCTTGTGTAAGTGCCCAAATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334295.9
ENST00000383056.7
ENST00000593035.5
3UTR GCA 72 bp CACAAAAGCCTCACATCTTCATTTTGTACTGGATCCTaGACTGAGTGGAGTCAGTCCTGCTCTTCCCTGCTC +
Preference number: 3 (lower is better)
Translates to: HKSLTSSFCTGS*TEWSQSCSSLL
Trigger: GAGCAGGGAAGAGCAGGACTGACTCCACTCAGTGCAGGATCCAGTACAAAATGAAGATGTGAGGCTTTTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334295.9
3UTR GCA 72 bp CACTGGTTGCCTCACCTCATTTGTATTAGTGGAGCTTaGATTTTCCCCTGCTCTGGAATCACCTTCCCAGCT +
Preference number: 3 (lower is better)
Translates to: HWLPHLICISGA*IFPCSGITFPA
Trigger: AGCTGGGAAGGTGATTCCAGAGCAGGGGAAAATGCAAGCTCCACTAATACAAATGAGGTGAGGCAACCAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590258.2
3UTR GCA 72 bp TGTTGGGTCTTGTGGAACCCCTCGCTGTGCACTGGTTaGCTCACCTCATTTGTATTAGTGGAGCTTGCATTT +
Preference number: 3 (lower is better)
Translates to: CWVLWNPSLCTG*LTSFVLVELAF
Trigger: AAATGCAAGCTCCACTAATACAAATGAGGTGAGGCAACCAGTGCACAGCGAGGGGTTCCACAAGACCCAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590258.2
3UTR CCA 72 bp TGCTCTGTGGGTCTTGAGCATGTCCCCAGCTATTGTTaGTCGTCTGTTGGATTTGTGAGGTTGTTGGGTCTT +
Preference number: 3 (lower is better)
Translates to: CSVGLEHVPSYC*SSVGFVRLLGL
Trigger: AAGACCCAACAACCTCACAAATCCAACAGACGACCAACAATAGCTGGGGACATGCTCAAGACCCACAGAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590258.2
3UTR-3UTR CAA 90 bp AGATCCTTTGGGGGAGACAGGGAGCTTGTTGAAGCAGACATTTGTCAAATAGTAAGGAGAGCCTGGAACTaGCGAGAGTTGGGTCTGTAC +
Preference number: 3 (lower is better)
Translates to: RSFGGDRELVEADICQIVRRAWN*RELGLY
Trigger: GTACAGACCCAACTCTCGCAAGTTCCAGGCTCTCCT...TACTATTTGACAAATGTCTGCTTCAACAAGCTCCCTGTCTCCCCCAAAGGATCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000590652.5
3UTR-3UTR CAA 90 bp TGGGTGAGGCAGCTACCTCCTCATTCACCCTTATCCAGCCTTTATTTTGATGTTGTTGCCTGCTACGCATaGACTTGGATCTCCAGGAGT +
Preference number: 3 (lower is better)
Translates to: WVRQLPPHSPLSSLYFDVVACYA*TWISRS
Trigger: ACTCCTGGAGATCCAAGTCAATGCGTAGCAGGCAAC...AACATCAAAATAAAGGCTGGATAAGGGTGAATGAGGAGGTAGCTGCCTCACCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590258.2
3UTR GCA 72 bp TTAAAACTCTCTGTGGTAGCTTACTCCAAAGGTGGGTaGTGTCAATTCCTTCCTTCCCTGCATGCCCATAGC +
Preference number: 3 (lower is better)
Translates to: LKLSVVAYSKGG*CQFLPSLHAHS
Trigger: GCTATGGGCATGCAGGGAAGGAAGGAATTGACAGCACCCACCTTTGGAGTAAGCTACCACAGAGAGTTTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585635.5
3UTR CCA 72 bp CCTTGGTTTTCCTCAGGGGCTATGGAAAGTGGTAGGTaGAGGAGATATCGAAGGCGCTTTCTCATGAATATC +
Preference number: 3 (lower is better)
Translates to: PWFSSGAMESGR*RRYRRRFLMNI
Trigger: GATATTCATGAGAAAGCGCCTTCGATATCTCCTCCACCTACCACTTTCCATAGCCCCTGAGGAAAACCAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334295.9
3UTR-3UTR CAA 90 bp TCCAAAGGAACTCTTGGAAGCCCACCCTGTTCTAAGCAGGAGACTGCTTGTCCTAGCACTCAGACTTATTaGGGCACTTACACAAGATTC +
Preference number: 3 (lower is better)
Translates to: SKGTLGSPPCSKQETACPSTQTY*GTYTRF
Trigger: GAATCTTGTGTAAGTGCCCAAATAAGTCTGAGTGCT...AGGACAAGCAGTCTCCTGCTTAGAACAGGGTGGGCTTCCAAGAGTTCCTTTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334295.9
3UTR-3UTR CAA 90 bp TCAGGGCCCAAAGGTAGGCTTGGAAATACAGTAGTTGCAGTAACACGATTTGAGTACTCATGGAGAGATTaGTCCTCACTGCTGCCCCTT +
Preference number: 3 (lower is better)
Translates to: SGPKGRLGNTVVAVTRFEYSWRD*SSLLPL
Trigger: AAGGGGCAGCAGTGAGGACAAATCTCTCCATGAGTA...CTCAAATCGTGTTACTGCAACTACTGTATTTCCAAGCCTACCTTTGGGCCCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590258.2
3UTR-3UTR CAA 90 bp CAGCTTCACACTCCATGTCATGTGGAAGCCATTGGTCATCAGGTAAAAGTTCTTTGTAGAGCTGGAGTATaGCCATGTTGTCCAGGCTTG +
Preference number: 3 (lower is better)
Translates to: QLHTPCHVEAIGHQVKVLCRAGV*PCCPGL
Trigger: CAAGCCTGGACAACATGGCAATACTCCAGCTCTACA...AAGAACTTTTACCTGATGACCAATGGCTTCCACATGACATGGAGTGTGAAGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587207.1
3UTR TCA 72 bp AAACCACAAAAGGGAGGGGGTATGATGAGGTGTGTCTaGCCTCCCATCCTGTTATGGTCAGAAACTCAGTTT +
Preference number: 3 (lower is better)
Translates to: KPQKGGGMMRCV*PPILLWSETQF
Trigger: AAACTGAGTTTCTGACCATAACAGGATGGGAGGTCAGACACACCTCATCATACCCCCTCCCTTTTGTGGTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000590842.5
ENST00000591906.5
ENST00000610723.4
3UTR GCA 72 bp ATGCTGTTAATTGCCATGCTTCCCAGTGGAATGATGTaGTCATCCAGCTTCACACTCCATGTCATGTGGAAG +
Preference number: 3 (lower is better)
Translates to: MLLIAMLPSGMM*SSSFTLHVMWK
Trigger: CTTCCACATGACATGGAGTGTGAAGCTGGATGAGCACATCATTCCACTGGGAAGCATGGCAATTAACAGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000585635.5
ENST00000590692.5
ENST00000591823.5
3UTR GCA 72 bp CACTGCCATTGCATGAATCCAGCTCAAATATCACACTaGGAGAGTCAAAGTGAGGCTTCTCTGGCTGATCAT +
Preference number: 3 (lower is better)
Translates to: HCHCMNPAQISH*ESQSEASLADH
Trigger: ATGATCAGCCAGAGAAGCCTCACTTTGACTCTCGCAGTGTGATATTTGAGCTGGATTCATGCAATGGCAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000585635.5
ENST00000590692.5
ENST00000591823.5
3UTR CCA 72 bp TGGCTCCTGAATGAACAATGCAGTTCTAATGCTTCATaGGTCAAAACCAGTGGTTTCTTTGGGGGACCTCTC +
Preference number: 3 (lower is better)
Translates to: WLLNEQCSSNAS*VKTSGFFGGPL
Trigger: GAGAGGTCCCCCAAAGAAACCACTGGTTTTGACCCATGAAGCATTAGAACTGCATTGTTCATTCAGGAGCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000334295.9
ENST00000383056.7
ENST00000593035.5
3UTR CCA 72 bp AGTCCCCTTGGCCAGCAGAGAGTCTGTTCACTTGGTTaGAGAGTTTTATTTGTAGTTCTCAGAAGCAACACC +
Preference number: 3 (lower is better)
Translates to: SPLGQQRVCSLG*RVLFVVLRSNT
Trigger: GGTGTTGCTTCTGAGAACTACAAATAAAACTCTCCAACCAAGTGAACAGACTCTCTGCTGGCCAAGGGGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000591906.5
ENST00000610723.4
3UTR CCA 72 bp CTGGAGTCCCCTTGGCCAGCAGAGAGTCTGTTCACTTaGTTGGAGAGTTTTATTTGTAGTTCTCAGAAGCAA +
Preference number: 3 (lower is better)
Translates to: LESPWPAESLFT*LESFICSSQKQ
Trigger: TTGCTTCTGAGAACTACAAATAAAACTCTCCAACCAAGTGAACAGACTCTCTGCTGGCCAAGGGGACTCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000591906.5
ENST00000610723.4
3UTR-3UTR CAA 90 bp CAAATATTAAGCATATGTGGGCTAGAGGTTCCCCCATATGTCAATGGGAAAATGATTCCAAATTCCCCATaGCTTCCAGAGGCAGGGGAC +
Preference number: 3 (lower is better)
Translates to: QILSICGLEVPPYVNGKMIPNSP*LPEAGD
Trigger: GTCCCCTGCCTCTGGAAGCAATGGGGAATTTGGAAT...CATTTTCCCATTGACATATGGGGGAACCTCTAGCCCACATATGCTTAATATTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000334295.9
3UTR-3UTR CAA 90 bp AATGAACAATGCAGTTCTAATGCTTCATGGGTCAAAACCAGTGGTTTCTTTGGGATTCCAAATTCCCCATaGCTTCCAGAGGCAGGGGAC +
Preference number: 3 (lower is better)
Translates to: NEQCSSNASWVKTSGFFGIPNSP*LPEAGD
Trigger: GTCCCCTGCCTCTGGAAGCAATGGGGAATTTGGAAT...CCCAAAGAAACCACTGGTTTTGACCCATGAAGCATTAGAACTGCATTGTTCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000334295.9
ENST00000383056.7
ENST00000593035.5
3UTR TCA 72 bp AAGAAATCATATGACGTTCAGCAGGAGGCTTTTCTATaGTGGTCACCTCAGTCACACCTGGGGAAGATTCTG +
Preference number: 3 (lower is better)
Translates to: KKSYDVQQEAFL*WSPQSHLGKIL
Trigger: CAGAATCTTCCCCAGGTGTGACTGAGGTGACCATCATAGAAAAGCCTCCTGCTGAACGTCATATGATTTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000590692.5
ENST00000591823.5
3UTR CCA 72 bp TCCTCAGTAGATTTTGGAATATACCATAGTTTACAATaGCAGGTGTTCCTCCCTTACCTTGGCCTGTGGGCT +
Preference number: 3 (lower is better)
Translates to: SSVDFGIYHSLQ*QVFLPYLGLWA
Trigger: AGCCCACAGGCCAAGGTAAGGGAGGAACACCTGCCATTGTAAACTATGGTATATTCCAAAATCTACTGAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591823.5
3UTR-3UTR CAA 90 bp AATGCAGTTCTAATGCTTCATGGGTCAAAACCAGTGGTTTCTTTGGGGGACCTCAGCACTCAGACTTATTaGGGCACTTACACAAGATTC +
Preference number: 3 (lower is better)
Translates to: NAVLMLHGSKPVVSLGDLSTQTY*GTYTRF
Trigger: GAATCTTGTGTAAGTGCCCAAATAAGTCTGAGTGCT...GAGGTCCCCCAAAGAAACCACTGGTTTTGACCCATGAAGCATTAGAACTGCATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000334295.9
ENST00000383056.7
ENST00000593035.5
3UTR-3UTR CAA 90 bp ACAATGGGAATACCATCATGCCAAGCTAAACACAAGCCAATTCTAAGTCAGTTATGTAGCCCCAAACTTTaGTCCTGGCAGACAGACTGC +
Preference number: 3 (lower is better)
Translates to: TMGIPSCQAKHKPILSQLCSPKL*SWQTDC
Trigger: GCAGTCTGTCTGCCAGGACAAAAGTTTGGGGCTACA...TAACTGACTTAGAATTGGCTTGTGTTTAGCTTGGCATGATGGTATTCCCATTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590258.2
3UTR-3UTR CAA 90 bp AAGCCAATTCTAAGTCAGTTAAATATGAGCATCCCTCCAGTTGCCAACTGCAACTGTCCCCAGCTATTGTaGGTCGTCTGTTGGATTTGT +
Preference number: 3 (lower is better)
Translates to: KPILSQLNMSIPPVANCNCPQLL*VVCWIC
Trigger: ACAAATCCAACAGACGACCAACAATAGCTGGGGACA...GTTGCAGTTGGCAACTGGAGGGATGCTCATATTTAACTGACTTAGAATTGGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590258.2
3UTR-3UTR CAA 90 bp GAAGCCATTGGTCATCAGGTAAAAGTTCTTCACATCTTCAGGCATCACACAGTTTGGAGTATTGCCATGTaGTCCAGGCTTGTCTTGAAC +
Preference number: 3 (lower is better)
Translates to: EAIGHQVKVLHIFRHHTVWSIAM*SRLVLN
Trigger: GTTCAAGACAAGCCTGGACAACATGGCAATACTCCA...AACTGTGTGATGCCTGAAGATGTGAAGAACTTTTACCTGATGACCAATGGCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587207.1
3UTR TCA 72 bp CACATACCTTCTCCATCGTGTCAGCTGTGTTTCTCTTaGTTCCGTGACACCCGGTTTATTAGTTCAAAAGTG +
Preference number: 3 (lower is better)
Translates to: HIPSPSCQLCFS*FRDTRFISSKV
Trigger: CACTTTTGAACTAATAAACCGGGTGTCACGGAATCAAGAGAAACACAGCTGACACGATGGAGAAGGTATGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590258.2
3UTR TCA 72 bp AAGAAATCATATGACGTTCAGCAGGAGGCTTTTCTATaGTGGTCACCTCAGTCACACCTGGGGAAGATTATC +
Preference number: 3 (lower is better)
Translates to: KKSYDVQQEAFL*WSPQSHLGKII
Trigger: GATAATCTTCCCCAGGTGTGACTGAGGTGACCATCATAGAAAAGCCTCCTGCTGAACGTCATATGATTTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585635.5
3UTR GCA 72 bp GTCAATGGGAAAATGATTTCTGAATTACAGGCAACTTaGTTCCAAAGGAACTCTTGGAAGCCCACCCTGTTC +
Preference number: 3 (lower is better)
Translates to: VNGKMISELQAT*FQRNSWKPTLF
Trigger: GAACAGGGTGGGCTTCCAAGAGTTCCTTTGGAAGCAAGTTGCCTGTAATTCAGAAATCATTTTCCCATTGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334295.9
3UTR-3UTR CAA 90 bp ACAATGGGAATACCATCATGCCAAGCTAAACACAAGCCAATTCTAAGTCAGTTACCAGCCAGAATAAGTTaGGCAGTTTGCTCCTTAGCC +
Preference number: 3 (lower is better)
Translates to: TMGIPSCQAKHKPILSQLPARIS*AVCSLA
Trigger: GGCTAAGGAGCAAACTGCCAAACTTATTCTGGCTGG...TAACTGACTTAGAATTGGCTTGTGTTTAGCTTGGCATGATGGTATTCCCATTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590258.2
3UTR CCA 72 bp AGTCACACCTGGGGAAGATTATCTTTAGATATGCCGTaGATTAAAACTCTCTGTGGTAGCTTACTCCAAAGG +
Preference number: 3 (lower is better)
Translates to: SHTWGRLSLDMP*IKTLCGSLLQR
Trigger: CCTTTGGAGTAAGCTACCACAGAGAGTTTTAATCCACGGCATATCTAAAGATAATCTTCCCCAGGTGTGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585635.5
3UTR-3UTR CAA 90 bp AAATCATGGAAGATGGGGTATCCATCCCCTCAAACATTTATCCTTTGTGTGAGATACACTATGTCTACATaGTGCTCTGAGTCTTGGGAA +
Preference number: 3 (lower is better)
Translates to: KSWKMGYPSPQTFILCVRYTMST*CSESWE
Trigger: TTCCCAAGACTCAGAGCACAATGTAGACATAGTGTA...TCTCACACAAAGGATAAATGTTTGAGGGGATGGATACCCCATCTTCCATGATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587382.5
3UTR-3UTR CAA 90 bp GCTTCACACTCCATGTCATGTGGAAGCCATTGGTCATCAGGTAAAAGTTCTTCACACACAGTTATTCTTTaGTTCCCAGGAAGAAATCAT +
Preference number: 3 (lower is better)
Translates to: ASHSMSCGSHWSSGKSSSHTVIL*FPGRNH
Trigger: ATGATTTCTTCCTGGGAACAAAAGAATAACTGTGTG...TGAAGAACTTTTACCTGATGACCAATGGCTTCCACATGACATGGAGTGTGAAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000585635.5
ENST00000590692.5
ENST00000591823.5
3UTR-3UTR CAA 90 bp TCATGGAAGATGGGGTATCCATCCCCTCAAACATTTATCCTTTGTGTGAGAAATTACCCAAATCTCATCTaGAATTGTGGCTCCCATAAT +
Preference number: 3 (lower is better)
Translates to: SWKMGYPSPQTFILCVRNYPNLI*NCGSHN
Trigger: ATTATGGGAGCCACAATTCAAGATGAGATTTGGGTA...ATTTCTCACACAAAGGATAAATGTTTGAGGGGATGGATACCCCATCTTCCATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587382.5
3UTR-3UTR CAA 90 bp TCATGGAAGATGGGGTATCCATCCCCTCAAACATTTATCCTTTGTGTGAGAAATGTGATTACTGAATACTaGAAATGTGGCTGGAGATTG +
Preference number: 3 (lower is better)
Translates to: SWKMGYPSPQTFILCVRNVITEY*KCGWRL
Trigger: CAATCTCCAGCCACATTTCAAGTATTCAGTAATCAC...ATTTCTCACACAAAGGATAAATGTTTGAGGGGATGGATACCCCATCTTCCATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587382.5
3UTR TCA 72 bp GTGGTAAGGGATACAAAGAACATACAATTGTGTACTTaGGAGGTTTCATGGAACATTATGACCCATCCAATG +
Preference number: 3 (lower is better)
Translates to: VVRDTKNIQLCT*EVSWNIMTHPM
Trigger: CATTGGATGGGTCATAATGTTCCATGAAACCTCTCAAGTACACAATTGTATGTTCTTTGTATCCCTTACCAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334295.9
ENST00000383056.7
ENST00000593035.5
3UTR TCA 72 bp TCCCAAAGACTCTTAAGCGCTGATATTTCAAGACTTTaGACTATTACAAATATGGGGAAGCAGCCAGTTAGA +
Preference number: 3 (lower is better)
Translates to: SQRLLSADISRL*TITNMGKQPVR
Trigger: TCTAACTGGCTGCTTCCCCATATTTGTAATAGTTCAAAGTCTTGAAATATCAGCGCTTAAGAGTCTTTGGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334295.9
3UTR GCA 72 bp GCAAATGAAGAAGCTGTTAATACGAAGCTCAGTTTATaGTCCCAAAGACTCTTAAGCGCTGATATTTCAAGA +
Preference number: 3 (lower is better)
Translates to: ANEEAVNTKLSL*SQRLLSADISR
Trigger: TCTTGAAATATCAGCGCTTAAGAGTCTTTGGGAGCATAAACTGAGCTTCGTATTAACAGCTTCTTCATTTGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334295.9
3UTR-3UTR CAA 90 bp TCTGAAAATTATAATATAAAACAAGCCGTGCTTGCTCTAACTAAGGCTGCCTGGTTGTATAAAATTGCTTaGGACTGCAGTTTCCTCCAT +
Preference number: 3 (lower is better)
Translates to: SENYNIKQAVLALTKAAWLYKIA*DCSFLH
Trigger: ATGGAGGAAACTGCAGTCCAAAGCAATTTTATACAA...CCAGGCAGCCTTAGTTAGAGCAAGCACGGCTTGTTTTATATTATAATTTTCAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000587382.5
3UTR TCA 72 bp GAGCCCTTTATTTTCATAATAGGTATTAGTCCCCATTaGTTCTGCCATGGACATAGGTCTTTCAGATCTTTT +
Preference number: 3 (lower is better)
Translates to: EPFIFIIGISPH*FCHGHRSFRSF
Trigger: AAAAGATCTGAAAGACCTATGTCCATGGCAGAATCAATGGGGACTAATACCTATTATGAAAATAAAGGGCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590258.2
3UTR TCA 72 bp TCTTGGGAATTCTTGTCCACAAAGGAGAATTCTATGTaGAGTCAATACTGTCAAATATACACTCTTCTCTCT +
Preference number: 3 (lower is better)
Translates to: SWEFLSTKENSM*SQYCQIYTLLS
Trigger: AGAGAGAAGAGTGTATATTTGACAGTATTGACTTCACATAGAATTCTCCTTTGTGGACAAGAATTCCCAAGA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587382.5
CDS-3UTR GCA 90 bp GCCCTGTCCACAAATGTCAAGGAGCAGTCGGGGTGTGCCAGTGAGTCCCGGGAGCCAGGTGCGGCTTGCTaGAGCCCAGCCCCGGGGACG +
Preference number: 4 (lower is better)
Translates to: ALSTNVKEQSGCASESREPGAAC*SPAPGT
Trigger: CGTCCCCGGGGCTGGGCTGCAGCAAGCCGCACCTGG...CTCCCGGGACTCACTGGCACACCCCGACTGCTCCTTGACATTTGTGGACAGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000587129.5
CDS-3UTR GCA 90 bp CCCTGTCCACAAATGTCAAGGAGCAGTCGGGGTGTGCCAGTGAGTCCCGGGAGCTCTCCAGGTGCGGCTTaGTGCAGCCCAGCCCCGGGG +
Preference number: 4 (lower is better)
Translates to: PCPQMSRSSRGVPVSPGSSPGAA*CSPAPG
Trigger: CCCCGGGGCTGGGCTGCAGCAAGCCGCACCTGGAGA...GCTCCCGGGACTCACTGGCACACCCCGACTGCTCCTTGACATTTGTGGACAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587129.5
CDS-3UTR GCA 90 bp CCACCCTGTTCTAAGCAGGAGACTGCTTGTCCTAAGGATGGCCAGGGACCAGGCCCAGGTGCGGCTTGCTaGAGCCCAGCCCCGGGGACG +
Preference number: 4 (lower is better)
Translates to: PPCSKQETACPKDGQGPGPGAAC*SPAPGT
Trigger: CGTCCCCGGGGCTGGGCTGCAGCAAGCCGCACCTGG...GCCTGGTCCCTGGCCATCCTTAGGACAAGCAGTCTCCTGCTTAGAACAGGGTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334295.9
CDS-3UTR CCA 90 bp CGCCTGCTGCACACGCTACAGCTCCGGGGCTTCATGCTGCTGACTCTTTGCTTGTCAAGATGGCGGACGTaGCGGGCCCCTCCCGCCCCA +
Preference number: 4 (lower is better)
Translates to: RLLHTLQLRGFMLLTLCLSRWRT*RAPPAP
Trigger: TGGGGCGGGAGGGGCCCGCCACGTCCGCCATCTTGA...CAAGCAAAGAGTCAGCAGCATGAAGCCCCGGAGCTGTAGCGTGTGCAGCAGGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000610723.4
CDS-3UTR CCA 90 bp CGCCTGCTGCACACGCTACAGCTCCGGGGCTTCATGCTGCTGACTCTTTGCTTGGCGTGGTGCGGCCAATaGGGACCGAGCCTGCAGGCC +
Preference number: 4 (lower is better)
Translates to: RLLHTLQLRGFMLLTLCLAWCGQ*GPSLQA
Trigger: GGCCTGCAGGCTCGGTCCCCATTGGCCGCACCACGC...CAAGCAAAGAGTCAGCAGCATGAAGCCCCGGAGCTGTAGCGTGTGCAGCAGGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610723.4
CDS-3UTR TCA 90 bp TCTGTGCATGGAAACCACCACTCTGGAGCTGGTAGGGAGTTGGAGGGAGGGGTGGGGACCGGAGGGTCCTaGGGGCCCTTTCTGGCCACC +
Preference number: 4 (lower is better)
Translates to: SVHGNHHSGAGRELEGGVGTGGS*GPFLAT
Trigger: GGTGGCCAGAAAGGGCCCTCAGGACCCTCCGGTCCC...CACCCCTCCCTCCAACTCCCTACCAGCTCCAGAGTGGTGGTTTCCATGCACAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000334295.9
ENST00000383056.7
ENST00000593035.5
CDS-3UTR GCA 90 bp CACTGTTGTTCCCATGCTGTTGGATTGGCGCCTGCTGCACACGCTACAGCTCCGTCTCCAGGTGCGGCTTaGTGCAGCCCAGCCCCGGGG +
Preference number: 4 (lower is better)
Translates to: HCCSHAVGLAPAAHATAPSPGAA*CSPAPG
Trigger: CCCCGGGGCTGGGCTGCAGCAAGCCGCACCTGGAGA...CGGAGCTGTAGCGTGTGCAGCAGGCGCCAATCCAACAGCATGGGAACAACAGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610723.4
CDS-3UTR CCA 90 bp ACGGTCCACACGCAAAACTGGAGGTCACCCCTAGGGCCATCTGTGCATGGAAACACAGCAGCAGCTCCGTaGGGCGCCGGTTCCCGCGGC +
Preference number: 4 (lower is better)
Translates to: TVHTQNWRSPLGPSVHGNTAAAP*GAGSRG
Trigger: GCCGCGGGAACCGGCGCCCCACGGAGCTGCTGCTGT...GTTTCCATGCACAGATGGCCCTAGGGGTGACCTCCAGTTTTGCGTGTGGACCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334295.9
ENST00000383056.7
ENST00000593035.5
CDS-3UTR TCA 90 bp GCCCTGTCCACAAATGTCAAGGAGCAGTCGGGGTGTGCCAGTGAGTCCCGGGAGGTCGGGGTGTGCCAGTaGGTCCCGGGAGCTCTAGAA +
Preference number: 4 (lower is better)
Translates to: ALSTNVKEQSGCASESREVGVCQ*VPGALE
Trigger: TTCTAGAGCTCCCGGGACTCACTGGCACACCCCGAC...CTCCCGGGACTCACTGGCACACCCCGACTGCTCCTTGACATTTGTGGACAGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587129.5
CDS-3UTR GCA 90 bp AGAAAGAGGCCTACGGTCCACACGCAAAACTGGAGGTCACCCCTAGGGCCATCTTCTCCAGGTGCGGCTTaGTGCAGCCCAGCCCCGGGG +
Preference number: 4 (lower is better)
Translates to: RKRPTVHTQNWRSPLGPSSPGAA*CSPAPG
Trigger: CCCCGGGGCTGGGCTGCAGCAAGCCGCACCTGGAGA...AGATGGCCCTAGGGGTGACCTCCAGTTTTGCGTGTGGACCGTAGGCCTCTTTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000334295.9
ENST00000383056.7
ENST00000593035.5
CDS-3UTR CCA 90 bp CACGCTACAGCTCCGGGGCTTCATGCTGCTGACTCTTTGCTTGTGGCCAGTCCCATGGGGGCCCGGGGTTaGTCTGACAGCAGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: HATAPGLHAADSLLVASPMGARG*SDSSSS
Trigger: GGAGCTGCTGCTGTCAGACCAACCCCGGGCCCCCAT...GGGACTGGCCACAAGCAAAGAGTCAGCAGCATGAAGCCCCGGAGCTGTAGCGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000610723.4
CDS-3UTR CCA 90 bp CCCTGTCCACAAATGTCAAGGAGCAGTCGGGGTGTGCCAGTGAGTCCCGGGAGCATGCCTCCTCCTCCATaGCTCGCGACCGCGATTCGC +
Preference number: 4 (lower is better)
Translates to: PCPQMSRSSRGVPVSPGSMPPPP*LATAIR
Trigger: GCGAATCGCGGTCGCGAGCCATGGAGGAGGAGGCAT...GCTCCCGGGACTCACTGGCACACCCCGACTGCTCCTTGACATTTGTGGACAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587129.5
CDS-3UTR CCA 90 bp GTTGTTCCCATGCTGTTGGATTGGCGCCTGCTGCACACGCTACAGCTCCGGGGCATGCCTCCTCCTCCATaGCTCGCGACCGCGATTCGC +
Preference number: 4 (lower is better)
Translates to: VVPMLLDWRLLHTLQLRGMPPPP*LATAIR
Trigger: GCGAATCGCGGTCGCGAGCCATGGAGGAGGAGGCAT...GCCCCGGAGCTGTAGCGTGTGCAGCAGGCGCCAATCCAACAGCATGGGAACAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610723.4
CDS-3UTR CCA 90 bp GATTGCGACACTGTTGTTCCCATGCTGTTGGATTGGCGCCTGCTGCACACGCTAGGGCGGGCCTCTGCGTaGTGCGGCCAATGGGGACCG +
Preference number: 4 (lower is better)
Translates to: DCDTVVPMLLDWRLLHTLGRASA*CGQWGP
Trigger: CGGTCCCCATTGGCCGCACCACGCAGAGGCCCGCCC...TAGCGTGTGCAGCAGGCGCCAATCCAACAGCATGGGAACAACAGTGTCGCAATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610723.4
CDS-3UTR TCA 90 bp TCAACTAGAAAGAGGCCTACGGTCCACACGCAAAACTGGAGGTCACCCCTAGGGGGGACCGGAGGGTCCTaGGGGCCCTTTCTGGCCACC +
Preference number: 4 (lower is better)
Translates to: STRKRPTVHTQNWRSPLGGTGGS*GPFLAT
Trigger: GGTGGCCAGAAAGGGCCCTCAGGACCCTCCGGTCCC...CCCTAGGGGTGACCTCCAGTTTTGCGTGTGGACCGTAGGCCTCTTTCTAGTTGA
62% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000334295.9
ENST00000383056.7
ENST00000593035.5
CDS-3UTR GCA 90 bp CTCTGGCTGATCATCACTGGCTTCATGTGTATCGTCCTCCAGGTCTGCCAGAGTCCAGGTGCGGCTTGCTaGAGCCCAGCCCCGGGGACG +
Preference number: 4 (lower is better)
Translates to: LWLIITGFMCIVLQVCQSPGAAC*SPAPGT
Trigger: CGTCCCCGGGGCTGGGCTGCAGCAAGCCGCACCTGG...ACTCTGGCAGACCTGGAGGACGATACACATGAAGCCAGTGATGATCAGCCAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000585635.5
ENST00000590692.5
ENST00000591823.5
CDS-3UTR GCA 90 bp CCCTGTCCACAAATGTCAAGGAGCAGTCGGGGTGTGCCAGTGAGTCCCGGGAGCCTGGTGAAGGCATATTaGCACTGGGGCAGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: PCPQMSRSSRGVPVSPGSLVKAY*HWGRPR
Trigger: CCTGGGCCTGCCCCAGTGGCAATATGCCTTCACCAG...GCTCCCGGGACTCACTGGCACACCCCGACTGCTCCTTGACATTTGTGGACAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587129.5
CDS-3UTR CCA 90 bp GGTCATTCAACTAGAAAGAGGCCTACGGTCCACACGCAAAACTGGAGGTCACCCACAGCAGCAGCTCCGTaGGGCGCCGGTTCCCGCGGC +
Preference number: 4 (lower is better)
Translates to: GHSTRKRPTVHTQNWRSPTAAAP*GAGSRG
Trigger: GCCGCGGGAACCGGCGCCCCACGGAGCTGCTGCTGT...GGGTGACCTCCAGTTTTGCGTGTGGACCGTAGGCCTCTTTCTAGTTGAATGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334295.9
ENST00000383056.7
ENST00000593035.5
CDS-3UTR CCA 90 bp CCCCTAGGGCCATCTGTGCATGGAAACCACCACTCTGGAGCTGGTAGGGAGTTGATGGGGGCCCGGGGTTaGTCTGACAGCAGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: PLGPSVHGNHHSGAGRELMGARG*SDSSSS
Trigger: GGAGCTGCTGCTGTCAGACCAACCCCGGGCCCCCAT...CAACTCCCTACCAGCTCCAGAGTGGTGGTTTCCATGCACAGATGGCCCTAGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000334295.9
ENST00000383056.7
ENST00000593035.5
CDS-3UTR CCA 90 bp CCCTGTCCACAAATGTCAAGGAGCAGTCGGGGTGTGCCAGTGAGTCCCGGGAGCAAGGCATATTGCCACTaGGGCAGGCCCAGGTGGGTG +
Preference number: 4 (lower is better)
Translates to: PCPQMSRSSRGVPVSPGSKAYCH*GRPRWV
Trigger: CACCCACCTGGGCCTGCCCCAGTGGCAATATGCCTT...GCTCCCGGGACTCACTGGCACACCCCGACTGCTCCTTGACATTTGTGGACAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587129.5
CDS-3UTR TCA 90 bp GGACTGCTCTTAGTTCCCCAGTGGGTTTGGAAGAGGGAAACCCTGGGTCGATTAGGCCCGGGGTTGGTCTaGCAGCAGCAGCTCCGTGGG +
Preference number: 4 (lower is better)
Translates to: GLLLVPQWVWKRETLGRLGPGLV*QQQLRG
Trigger: CCCACGGAGCTGCTGCTGTCAGACCAACCCCGGGCC...TAATCGACCCAGGGTTTCCCTCTTCCAAACCCACTGGGGAACTAAGAGCAGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334295.9
CDS-3UTR TCA 90 bp TCCCTGCTCACTCCTTCTGAGGCAGGTCTTGAGCCTTTCCTTATCATAACCCCCGGGACCGGAGGGTCCTaGGGGCCCTTTCTGGCCACC +
Preference number: 4 (lower is better)
Translates to: SLLTPSEAGLEPFLIITPGTGGS*GPFLAT
Trigger: GGTGGCCAGAAAGGGCCCTCAGGACCCTCCGGTCCC...GGGGGTTATGATAAGGAAAGGCTCAAGACCTGCCTCAGAAGGAGTGAGCAGGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334295.9
CDS-3UTR GCA 90 bp GTTGTTCCCATGCTGTTGGATTGGCGCCTGCTGCACACGCTACAGCTCCGGGGCTGTTGGATTGGCGCCTaGTGCACACGCTACAGCTCC +
Preference number: 4 (lower is better)
Translates to: VVPMLLDWRLLHTLQLRGCWIGA*CTRYSS
Trigger: GGAGCTGTAGCGTGTGCAGCAGGCGCCAATCCAACA...GCCCCGGAGCTGTAGCGTGTGCAGCAGGCGCCAATCCAACAGCATGGGAACAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000591906.5
ENST00000610723.4
CDS-3UTR CCA 90 bp CCCCTAGGGCCATCTGTGCATGGAAACCACCACTCTGGAGCTGGTAGGGAGTTGATGCCTCCTCCTCCATaGCTCGCGACCGCGATTCGC +
Preference number: 4 (lower is better)
Translates to: PLGPSVHGNHHSGAGRELMPPPP*LATAIR
Trigger: GCGAATCGCGGTCGCGAGCCATGGAGGAGGAGGCAT...CAACTCCCTACCAGCTCCAGAGTGGTGGTTTCCATGCACAGATGGCCCTAGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334295.9
ENST00000383056.7
ENST00000593035.5
CDS-3UTR CCA 90 bp GTTGTTCCCATGCTGTTGGATTGGCGCCTGCTGCACACGCTACAGCTCCGGGGCCCCATGCTGTTGGATTaGCGCCTGCTGCACACGCTA +
Preference number: 4 (lower is better)
Translates to: VVPMLLDWRLLHTLQLRGPMLLD*RLLHTL
Trigger: TAGCGTGTGCAGCAGGCGCCAATCCAACAGCATGGG...GCCCCGGAGCTGTAGCGTGTGCAGCAGGCGCCAATCCAACAGCATGGGAACAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000591906.5
ENST00000610723.4
CDS-3UTR CCA 90 bp CTGCTGCACACGCTACAGCTCCGGGGCTTCATGCTGCTGACTCTTTGCTTGTGGGCGGTTGTTTCAAGATaGCGGACGTGGCGGGCCCCT +
Preference number: 4 (lower is better)
Translates to: LLHTLQLRGFMLLTLCLWAVVSR*RTWRAP
Trigger: AGGGGCCCGCCACGTCCGCCATCTTGAAACAACCGC...CCACAAGCAAAGAGTCAGCAGCATGAAGCCCCGGAGCTGTAGCGTGTGCAGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610723.4
3UTR CAA 72 bp GGCCTGTGGGCTAATGCCATAGCTGGTGAAGGCATATaGCCACTGGGGCAGGCCCAGGTGGGTGATGAGCAG +
Preference number: 4 (lower is better)
Translates to: GLWANAIAGEGI*PLGQAQVGDEQ
Trigger: CTGCTCATCACCCACCTGGGCCTGCCCCAGTGGCAATATGCCTTCACCAGCTATGGCATTAGCCCACAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591823.5
CDS-3UTR TCA 90 bp CCCTGTCCACAAATGTCAAGGAGCAGTCGGGGTGTGCCAGTGAGTCCCGGGAGCATTCTAGGATGCGCGTaGTGCCCAGGGTCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: PCPQMSRSSRGVPVSPGSILGCA*CPGSAS
Trigger: AGAAGCTGACCCTGGGCATCACGCGCATCCTAGAAT...GCTCCCGGGACTCACTGGCACACCCCGACTGCTCCTTGACATTTGTGGACAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587129.5
CDS-3UTR TCA 90 bp TTGGCGCCTGCTGCACACGCTACAGCTCCGGGGCTTCATGCTGCTGACTCTTTGGGGGCTTCATGCTGCTaGCTCTTTGCTTGTGGCCAG +
Preference number: 4 (lower is better)
Translates to: LAPAAHATAPGLHAADSLGASCC*LFACGQ
Trigger: CTGGCCACAAGCAAAGAGTCAGCAGCATGAAGCCCC...CAAAGAGTCAGCAGCATGAAGCCCCGGAGCTGTAGCGTGTGCAGCAGGCGCCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610723.4
CDS-3UTR GCA 90 bp CCCTGTCCACAAATGTCAAGGAGCAGTCGGGGTGTGCCAGTGAGTCCCGGGAGCATCGTCCTCCAGGTCTaGCAGAGTGGGTGCATTAGG +
Preference number: 4 (lower is better)
Translates to: PCPQMSRSSRGVPVSPGSIVLQV*QSGCIR
Trigger: CCTAATGCACCCACTCTGGCAGACCTGGAGGACGAT...GCTCCCGGGACTCACTGGCACACCCCGACTGCTCCTTGACATTTGTGGACAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587129.5
CDS-3UTR GCA 90 bp GCGACACTGTTGTTCCCATGCTGTTGGATTGGCGCCTGCTGCACACGCTACAGCCTGGTGAAGGCATATTaGCACTGGGGCAGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: ATLLFPCCWIGACCTRYSLVKAY*HWGRPR
Trigger: CCTGGGCCTGCCCCAGTGGCAATATGCCTTCACCAG...GCTGTAGCGTGTGCAGCAGGCGCCAATCCAACAGCATGGGAACAACAGTGTCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591906.5
CDS-3UTR GCA 90 bp ACTCAGTTTCTAAGGTTCTCTGGAGTCCCCTTGGCCAGCAGAGAGTCTGTTCACAATGGGGACCGAGCCTaGAGGCCGAGGCGTGGCGGC +
Preference number: 4 (lower is better)
Translates to: TQFLRFSGVPLASRESVHNGDRA*RPRRGG
Trigger: GCCGCCACGCCTCGGCCTGCAGGCTCGGTCCCCATT...GTGAACAGACTCTCTGCTGGCCAAGGGGACTCCAGAGAACCTTAGAAACTGAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610723.4
CDS-3UTR GCA 90 bp TCTTCTGGGAACAGGACCTTAAACAGTTCCACAGGCTCGCCTCTTCAGAATGGCCGGGCCTCTGCGTGGTaGGGCCAATGGGGACCGAGC +
Preference number: 4 (lower is better)
Translates to: SSGNRTLNSSTGSPLQNGRASAW*GQWGPS
Trigger: GCTCGGTCCCCATTGGCCGCACCACGCAGAGGCCCG...GCCATTCTGAAGAGGCGAGCCTGTGGAACTGTTTAAGGTCCTGTTCCCAGAAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614939.4
CDS-3UTR CCA 90 bp ATGTGCTCATCCAGCTTCACACTCCATGTCATGTGGAAGCCATTGGTCATCAGGACAGCAGCAGCTCCGTaGGGCGCCGGTTCCCGCGGC +
Preference number: 4 (lower is better)
Translates to: MCSSSFTLHVMWKPLVIRTAAAP*GAGSRG
Trigger: GCCGCGGGAACCGGCGCCCCACGGAGCTGCTGCTGT...CCTGATGACCAATGGCTTCCACATGACATGGAGTGTGAAGCTGGATGAGCACAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585635.5
CDS-3UTR CCA 90 bp CCCCTAGGGCCATCTGTGCATGGAAACCACCACTCTGGAGCTGGTAGGGAGTTGAAGGCATATTGCCACTaGGGCAGGCCCAGGTGGGTG +
Preference number: 4 (lower is better)
Translates to: PLGPSVHGNHHSGAGRELKAYCH*GRPRWV
Trigger: CACCCACCTGGGCCTGCCCCAGTGGCAATATGCCTT...CAACTCCCTACCAGCTCCAGAGTGGTGGTTTCCATGCACAGATGGCCCTAGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334295.9
ENST00000383056.7
ENST00000593035.5
CDS-3UTR CCA 90 bp GTTGTTCCCATGCTGTTGGATTGGCGCCTGCTGCACACGCTACAGCTCCGGGGCCTGACTCTTTGCTTGTaGCCAGTCCCCATGCCTTGG +
Preference number: 4 (lower is better)
Translates to: VVPMLLDWRLLHTLQLRGLTLCL*PVPMPW
Trigger: CCAAGGCATGGGGACTGGCCACAAGCAAAGAGTCAG...GCCCCGGAGCTGTAGCGTGTGCAGCAGGCGCCAATCCAACAGCATGGGAACAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591906.5
CDS-3UTR CCA 90 bp CTGTTGTTCCCATGCTGTTGGATTGGCGCCTGCTGCACACGCTACAGCTCCGGGCCCATGCTGTTGGATTaGCGCCTGCTGCACACGCTA +
Preference number: 4 (lower is better)
Translates to: LLFPCCWIGACCTRYSSGPMLLD*RLLHTL
Trigger: TAGCGTGTGCAGCAGGCGCCAATCCAACAGCATGGG...CCCGGAGCTGTAGCGTGTGCAGCAGGCGCCAATCCAACAGCATGGGAACAACAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000591906.5
ENST00000610723.4
CDS-3UTR CCA 90 bp TCTTCTGGGAACAGGACCTTAAACAGTTCCACAGGCTCGCCTCTTCAGAATGGCTCAAGATGGCGGACGTaGCGGGCCCCTCCCGCCCCA +
Preference number: 4 (lower is better)
Translates to: SSGNRTLNSSTGSPLQNGSRWRT*RAPPAP
Trigger: TGGGGCGGGAGGGGCCCGCCACGTCCGCCATCTTGA...GCCATTCTGAAGAGGCGAGCCTGTGGAACTGTTTAAGGTCCTGTTCCCAGAAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614939.4
3UTR CAA 72 bp CTACAGCTCCGGGGCTTCATGCTGCTGACTCTTTGCTaGTGGCCAGTCCCCATGCCTGCAGAGACACAGCTC +
Preference number: 4 (lower is better)
Translates to: LQLRGFMLLTLC*WPVPMPAETQL
Trigger: GAGCTGTGTCTCTGCAGGCATGGGGACTGGCCACAAGCAAAGAGTCAGCAGCATGAAGCCCCGGAGCTGTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610723.4
CDS-3UTR GCA 90 bp TTCTTCTGGGAACAGGACCTTAAACAGTTCCACAGGCTCGCCTCTTCAGAATGGTCTCCAGGTGCGGCTTaGTGCAGCCCAGCCCCGGGG +
Preference number: 4 (lower is better)
Translates to: FFWEQDLKQFHRLASSEWSPGAA*CSPAPG
Trigger: CCCCGGGGCTGGGCTGCAGCAAGCCGCACCTGGAGA...CCATTCTGAAGAGGCGAGCCTGTGGAACTGTTTAAGGTCCTGTTCCCAGAAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614939.4
CDS-3UTR GCA 90 bp TTGGCGCCTGCTGCACACGCTACAGCTCCGGGGCTTCATGCTGCTGACTCTTTGATCGTCCTCCAGGTCTaGCAGAGTGGGTGCATTAGG +
Preference number: 4 (lower is better)
Translates to: LAPAAHATAPGLHAADSLIVLQV*QSGCIR
Trigger: CCTAATGCACCCACTCTGGCAGACCTGGAGGACGAT...CAAAGAGTCAGCAGCATGAAGCCCCGGAGCTGTAGCGTGTGCAGCAGGCGCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610723.4
CDS-3UTR GCA 90 bp AGAAAGAGGCCTACGGTCCACACGCAAAACTGGAGGTCACCCCTAGGGCCATCTCTGGTGAAGGCATATTaGCACTGGGGCAGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: RKRPTVHTQNWRSPLGPSLVKAY*HWGRPR
Trigger: CCTGGGCCTGCCCCAGTGGCAATATGCCTTCACCAG...AGATGGCCCTAGGGGTGACCTCCAGTTTTGCGTGTGGACCGTAGGCCTCTTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000334295.9
ENST00000383056.7
ENST00000593035.5
CDS-3UTR GCA 90 bp CACACGCAAAACTGGAGGTCACCCCTAGGGCCATCTGTGCATGGAAACCACCACAGTTGGAGGGAGGGGTaGTCACTTCCGGGTGGGGTT +
Preference number: 4 (lower is better)
Translates to: HTQNWRSPLGPSVHGNHHSWREG*SLPGGV
Trigger: AACCCCACCCGGAAGTGAGCACCCCTCCCTCCAACT...GTGGTGGTTTCCATGCACAGATGGCCCTAGGGGTGACCTCCAGTTTTGCGTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000334295.9
ENST00000383056.7
ENST00000593035.5
CDS-3UTR GCA 90 bp AGAAAGAGGCCTACGGTCCACACGCAAAACTGGAGGTCACCCCTAGGGCCATCTGGGGACAGCACAACCTaGTCTGGAGGCCTCACTACG +
Preference number: 4 (lower is better)
Translates to: RKRPTVHTQNWRSPLGPSGDSTT*SGGLTT
Trigger: CGTAGTGAGGCCTCCAGAGCAGGTTGTGCTGTCCCC...AGATGGCCCTAGGGGTGACCTCCAGTTTTGCGTGTGGACCGTAGGCCTCTTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000334295.9
ENST00000383056.7
ENST00000593035.5
CDS-3UTR GCA 90 bp GGTTCTCTGGAGTCCCCTTGGCCAGCAGAGAGTCTGTTCACTTGGTTGGAGAGTTGGATTGGCGCCTGCTaGACACGCTACAGCTCCGGG +
Preference number: 4 (lower is better)
Translates to: GSLESPWPAESLFTWLESWIGAC*TRYSSG
Trigger: CCCGGAGCTGTAGCGTGTGCAGCAGGCGCCAATCCA...ACTCTCCAACCAAGTGAACAGACTCTCTGCTGGCCAAGGGGACTCCAGAGAACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000590842.5
ENST00000591906.5
ENST00000610723.4
CDS-3UTR GCA 90 bp CAGGAAGGTACAGAGTGTGAACCCTCTGGCTTCTCTGGAAGTCCCTGGGGAGAACCATGGGGTGTGGCCTaGAGATGCATGAGGTGGGCC +
Preference number: 4 (lower is better)
Translates to: QEGTECEPSGFSGSPWGEPWGVA*RCMRWA
Trigger: GGCCCACCTCATGCATCTGCAGGCCACACCCCATGG...TTCTCCCCAGGGACTTCCAGAGAAGCCAGAGGGTTCACACTCTGTACCTTCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590258.2
CDS-3UTR CCA 90 bp TGGAGTCCCCTTGGCCAGCAGAGAGTCTGTTCACTTGGTTGGAGAGTTTTATTTACAGCAGCAGCTCCGTaGGGCGCCGGTTCCCGCGGC +
Preference number: 4 (lower is better)
Translates to: WSPLGQQRVCSLGWRVLFTAAAP*GAGSRG
Trigger: GCCGCGGGAACCGGCGCCCCACGGAGCTGCTGCTGT...AAATAAAACTCTCCAACCAAGTGAACAGACTCTCTGCTGGCCAAGGGGACTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610723.4
CDS-3UTR CCA 90 bp GGACTGCTCTTAGTTCCCCAGTGGGTTTGGAAGAGGGAAACCCTGGGTCGATTAATGGGGGCCCGGGGTTaGTCTGACAGCAGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: GLLLVPQWVWKRETLGRLMGARG*SDSSSS
Trigger: GGAGCTGCTGCTGTCAGACCAACCCCGGGCCCCCAT...TAATCGACCCAGGGTTTCCCTCTTCCAAACCCACTGGGGAACTAAGAGCAGTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000334295.9
CDS-3UTR CCA 90 bp TCAACTAGAAAGAGGCCTACGGTCCACACGCAAAACTGGAGGTCACCCCTAGGGATGCCTCCTCCTCCATaGCTCGCGACCGCGATTCGC +
Preference number: 4 (lower is better)
Translates to: STRKRPTVHTQNWRSPLGMPPPP*LATAIR
Trigger: GCGAATCGCGGTCGCGAGCCATGGAGGAGGAGGCAT...CCCTAGGGGTGACCTCCAGTTTTGCGTGTGGACCGTAGGCCTCTTTCTAGTTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334295.9
ENST00000383056.7
ENST00000593035.5
CDS-3UTR CCA 90 bp CCCTGTCCACAAATGTCAAGGAGCAGTCGGGGTGTGCCAGTGAGTCCCGGGAGCAAGAGCCTTGGCCTGTaGGCTAATGCCATAGCTGGT +
Preference number: 4 (lower is better)
Translates to: PCPQMSRSSRGVPVSPGSKSLGL*ANAIAG
Trigger: ACCAGCTATGGCATTAGCCCACAGGCCAAGGCTCTT...GCTCCCGGGACTCACTGGCACACCCCGACTGCTCCTTGACATTTGTGGACAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587129.5
CDS-3UTR CCA 90 bp CGCCTGCTGCACACGCTACAGCTCCGGGGCTTCATGCTGCTGACTCTTTGCTTGCTGACTCTTTGCTTGTaGCCAGTCCCCATGCCTGCA +
Preference number: 4 (lower is better)
Translates to: RLLHTLQLRGFMLLTLCLLTLCL*PVPMPA
Trigger: TGCAGGCATGGGGACTGGCCACAAGCAAAGAGTCAG...CAAGCAAAGAGTCAGCAGCATGAAGCCCCGGAGCTGTAGCGTGTGCAGCAGGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610723.4
CDS-3UTR CCA 90 bp GGGAACAGGACCTTAAACAGTTCCACAGGCTCGCCTCTTCAGAATGGCAAAACTGCGTGGTGCGGCCAATaGGGACCGAGCCTGCAGGCC +
Preference number: 4 (lower is better)
Translates to: GNRTLNSSTGSPLQNGKTAWCGQ*GPSLQA
Trigger: GGCCTGCAGGCTCGGTCCCCATTGGCCGCACCACGC...AGTTTTGCCATTCTGAAGAGGCGAGCCTGTGGAACTGTTTAAGGTCCTGTTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614939.4
CDS-3UTR CCA 90 bp CAGGACCTTAAACAGTTCCACAGGCTCGCCTCTTCAGAATGGCAAAACTCTTCTGGGCGGGCCTCTGCGTaGTGCGGCCAATGGGGACCG +
Preference number: 4 (lower is better)
Translates to: QDLKQFHRLASSEWQNSSGRASA*CGQWGP
Trigger: CGGTCCCCATTGGCCGCACCACGCAGAGGCCCGCCC...AGAAGAGTTTTGCCATTCTGAAGAGGCGAGCCTGTGGAACTGTTTAAGGTCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614939.4
CDS-3UTR TCA 90 bp CCCTGTCCACAAATGTCAAGGAGCAGTCGGGGTGTGCCAGTGAGTCCCGGGAGCCAGGAGGCTTTTCTATaGTGGTCACCTCAGTCACAC +
Preference number: 4 (lower is better)
Translates to: PCPQMSRSSRGVPVSPGSQEAFL*WSPQSH
Trigger: GTGTGACTGAGGTGACCATCATAGAAAAGCCTCCTG...GCTCCCGGGACTCACTGGCACACCCCGACTGCTCCTTGACATTTGTGGACAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587129.5
CDS-3UTR TCA 90 bp GCCCTGTCCACAAATGTCAAGGAGCAGTCGGGGTGTGCCAGTGAGTCCCGGGAGTGCTTCCCAGTGGAATaGTGTGCTCATCCAGCTTCA +
Preference number: 4 (lower is better)
Translates to: ALSTNVKEQSGCASESRECFPVE*CAHPAS
Trigger: TGAAGCTGGATGAGCACATCATTCCACTGGGAAGCA...CTCCCGGGACTCACTGGCACACCCCGACTGCTCCTTGACATTTGTGGACAGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587129.5
CDS-3UTR TCA 90 bp GTTGTTCCCATGCTGTTGGATTGGCGCCTGCTGCACACGCTACAGCTCCGGGGCTGCTTCCCAGTGGAATaGTGTGCTCATCCAGCTTCA +
Preference number: 4 (lower is better)
Translates to: VVPMLLDWRLLHTLQLRGCFPVE*CAHPAS
Trigger: TGAAGCTGGATGAGCACATCATTCCACTGGGAAGCA...GCCCCGGAGCTGTAGCGTGTGCAGCAGGCGCCAATCCAACAGCATGGGAACAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000591906.5
ENST00000610723.4
CDS-3UTR TCA 90 bp CCCTGTCCACAAATGTCAAGGAGCAGTCGGGGTGTGCCAGTGAGTCCCGGGAGCGAAGACTGGGTGAGCTaGGTCAGTTTTGAGATGCTG +
Preference number: 4 (lower is better)
Translates to: PCPQMSRSSRGVPVSPGSEDWVS*VSFEML
Trigger: CAGCATCTCAAAACTGACTCAGCTCACCCAGTCTTC...GCTCCCGGGACTCACTGGCACACCCCGACTGCTCCTTGACATTTGTGGACAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587129.5
CDS-3UTR TCA 90 bp CCCCAGTGGGTTTGGAAGAGGGAAACCCTGGGTCGATTAGCAGGTAGACAGTGCTTGGGGCTAGGTGGGTaGCTCCCCACTTTCCCTGTT +
Preference number: 4 (lower is better)
Translates to: PQWVWKRETLGRLAGRQCLGLGG*LPTFPV
Trigger: AACAGGGAAAGTGGGGAGTCACCCACCTAGCCCCAA...GCACTGTCTACCTGCTAATCGACCCAGGGTTTCCCTCTTCCAAACCCACTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000334295.9
CDS-3UTR TCA 90 bp GTGCGAAGAACCCTGAAGAGCGGCCTGACCCCAGAAGAAGCCAGAGCCCTGGGCACTTTCTCTGAACTTTaGTCAACAGCCTGCCCTGGT +
Preference number: 4 (lower is better)
Translates to: VRRTLKSGLTPEEARALGTFSEL*STACPG
Trigger: ACCAGGGCAGGCTGTTGATCAAAGTTCAGAGAAAGT...GCCCAGGGCTCTGGCTTCTTCTGGGGTCAGGCCGCTCTTCAGGGTTCTTCGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590258.2
CDS-3UTR GCA 90 bp GAGTCCCCTTGGCCAGCAGAGAGTCTGTTCACTTGGTTGGAGAGTTTTATTTGTTCTCCAGGTGCGGCTTaGTGCAGCCCAGCCCCGGGG +
Preference number: 4 (lower is better)
Translates to: ESPWPAESLFTWLESFICSPGAA*CSPAPG
Trigger: CCCCGGGGCTGGGCTGCAGCAAGCCGCACCTGGAGA...ACAAATAAAACTCTCCAACCAAGTGAACAGACTCTCTGCTGGCCAAGGGGACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000590842.5
ENST00000610723.4
CDS-3UTR GCA 90 bp GGTTCTCTGGAGTCCCCTTGGCCAGCAGAGAGTCTGTTCACTTGGTTGGAGAGTCTGGTGAAGGCATATTaGCACTGGGGCAGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: GSLESPWPAESLFTWLESLVKAY*HWGRPR
Trigger: CCTGGGCCTGCCCCAGTGGCAATATGCCTTCACCAG...ACTCTCCAACCAAGTGAACAGACTCTCTGCTGGCCAAGGGGACTCCAGAGAACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000590842.5
ENST00000591906.5
CDS-3UTR GCA 90 bp TTGAGTGACACCGCTGACCTCCTGGTTCCTCCGCTGCTTCACTTGTGGAATCCAAGTTGGAGGGAGGGGTaGTCACTTCCGGGTGGGGTT +
Preference number: 4 (lower is better)
Translates to: LSDTADLLVPPLLHLWNPSWREG*SLPGGV
Trigger: AACCCCACCCGGAAGTGAGCACCCCTCCCTCCAACT...TGGATTCCACAAGTGAAGCAGCGGAGGAACCAGGAGGTCAGCGGTGTCACTCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334295.9
CDS-3UTR GCA 90 bp TCTGTGCATGGAAACCACCACTCTGGAGCTGGTAGGGAGTTGGAGGGAGGGGTGAGTCCTGCTCTTCCCTaGTCACTCCTTCTGAGGCAG +
Preference number: 4 (lower is better)
Translates to: SVHGNHHSGAGRELEGGVSPALP*SLLLRQ
Trigger: CTGCCTCAGAAGGAGTGAGCAGGGAAGAGCAGGACT...CACCCCTCCCTCCAACTCCCTACCAGCTCCAGAGTGGTGGTTTCCATGCACAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334295.9
CDS-3UTR GCA 90 bp CACGCTACAGCTCCGGGGCTTCATGCTGCTGACTCTTTGCTTGTGGCCAGTCCCACACTGTTGTTCCCATaGTGTTGGATTGGCGCCTGC +
Preference number: 4 (lower is better)
Translates to: HATAPGLHAADSLLVASPTLLFP*CWIGAC
Trigger: GCAGGCGCCAATCCAACAGCATGGGAACAACAGTGT...GGGACTGGCCACAAGCAAAGAGTCAGCAGCATGAAGCCCCGGAGCTGTAGCGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610723.4
CDS-3UTR GCA 90 bp GATTGCGACACTGTTGTTCCCATGCTGTTGGATTGGCGCCTGCTGCACACGCTAGCCAGTCCCCATGCCTaGAGAGACACAGCTCCTCAG +
Preference number: 4 (lower is better)
Translates to: DCDTVVPMLLDWRLLHTLASPHA*RDTAPQ
Trigger: CTGAGGAGCTGTGTCTCTGCAGGCATGGGGACTGGC...TAGCGTGTGCAGCAGGCGCCAATCCAACAGCATGGGAACAACAGTGTCGCAATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610723.4
CDS-3UTR CCA 90 bp CTACAGCTCCGGGGCTTCATGCTGCTGACTCTTTGCTTGTGGCCAGTCCCCATGCCGAGGCCAATTTCATaGCATGCCGGGAACGGTAGT +
Preference number: 4 (lower is better)
Translates to: LQLRGFMLLTLCLWPVPMPRPIS*HAGNGS
Trigger: ACTACCGTTCCCGGCATGCCATGAAATTGGCCTCGG...CATGGGGACTGGCCACAAGCAAAGAGTCAGCAGCATGAAGCCCCGGAGCTGTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610723.4
CDS-3UTR CCA 90 bp GTTCTCTGGAGTCCCCTTGGCCAGCAGAGAGTCTGTTCACTTGGTTGGAGAGTTATGCCTCCTCCTCCATaGCTCGCGACCGCGATTCGC +
Preference number: 4 (lower is better)
Translates to: VLWSPLGQQRVCSLGWRVMPPPP*LATAIR
Trigger: GCGAATCGCGGTCGCGAGCCATGGAGGAGGAGGCAT...AACTCTCCAACCAAGTGAACAGACTCTCTGCTGGCCAAGGGGACTCCAGAGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590842.5
ENST00000610723.4
CDS-3UTR CCA 90 bp ACGGTCCACACGCAAAACTGGAGGTCACCCCTAGGGCCATCTGTGCATGGAAACGTCCACACGCAAAACTaGAGGTCACCCCTAGGGCCA +
Preference number: 4 (lower is better)
Translates to: TVHTQNWRSPLGPSVHGNVHTQN*RSPLGP
Trigger: TGGCCCTAGGGGTGACCTCCAGTTTTGCGTGTGGAC...GTTTCCATGCACAGATGGCCCTAGGGGTGACCTCCAGTTTTGCGTGTGGACCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000334295.9
ENST00000383056.7
ENST00000593035.5
CDS-3UTR CCA 90 bp CCCCTAGGGCCATCTGTGCATGGAAACCACCACTCTGGAGCTGGTAGGGAGTTGGCCTCACTACGAGCCTaGCTAATGTCGGTGGGACTA +
Preference number: 4 (lower is better)
Translates to: PLGPSVHGNHHSGAGRELASLRA*LMSVGL
Trigger: TAGTCCCACCGACATTAGCCAGGCTCGTAGTGAGGC...CAACTCCCTACCAGCTCCAGAGTGGTGGTTTCCATGCACAGATGGCCCTAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334295.9
ENST00000383056.7
ENST00000593035.5
CDS-3UTR CCA 90 bp ACGGTCCACACGCAAAACTGGAGGTCACCCCTAGGGCCATCTGTGCATGGAAACCAGCACAACCTGCTCTaGAGGCCTCACTACGAGCCT +
Preference number: 4 (lower is better)
Translates to: TVHTQNWRSPLGPSVHGNQHNLL*RPHYEP
Trigger: AGGCTCGTAGTGAGGCCTCCAGAGCAGGTTGTGCTG...GTTTCCATGCACAGATGGCCCTAGGGGTGACCTCCAGTTTTGCGTGTGGACCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334295.9
ENST00000383056.7
ENST00000593035.5
CDS-3UTR CCA 90 bp CACACGCAAAACTGGAGGTCACCCCTAGGGCCATCTGTGCATGGAAACCACCACCAGCACAACCTGCTCTaGAGGCCTCACTACGAGCCT +
Preference number: 4 (lower is better)
Translates to: HTQNWRSPLGPSVHGNHHQHNLL*RPHYEP
Trigger: AGGCTCGTAGTGAGGCCTCCAGAGCAGGTTGTGCTG...GTGGTGGTTTCCATGCACAGATGGCCCTAGGGGTGACCTCCAGTTTTGCGTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334295.9
ENST00000383056.7
ENST00000593035.5
CDS-3UTR CCA 90 bp GTGCGAAGAACCCTGAAGAGCGGCCTGACCCCAGAAGAAGCCAGAGCCCTGGGCAATGAAGACTTGTCTTaGGTGAGGCAGCTACCTCCT +
Preference number: 4 (lower is better)
Translates to: VRRTLKSGLTPEEARALGNEDLS*VRQLPP
Trigger: AGGAGGTAGCTGCCTCACCCAAGACAAGTCTTCATT...GCCCAGGGCTCTGGCTTCTTCTGGGGTCAGGCCGCTCTTCAGGGTTCTTCGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590258.2
CDS-3UTR CCA 90 bp CCCTGGGCTTGGTTGGCACCTCGGAGTTGCAGCTGTGACACTCATAGGTTACTCGGAAGGCATAGACCATaGGGTGTGGCCTGCAGATGC +
Preference number: 4 (lower is better)
Translates to: PWAWLAPRSCSCDTHRLLGRHRP*GVACRC
Trigger: GCATCTGCAGGCCACACCCCATGGTCTATGCCTTCC...GAGTAACCTATGAGTGTCACAGCTGCAACTCCGAGGTGCCAACCAAGCCCAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590258.2
CDS-3UTR TCA 90 bp AATGCAGTTCTAATGCTTCATGGGTCAAAACCAGTGGTTTCTTTGGGGGACCTCGGCCCGGGGTTGGTCTaGCAGCAGCAGCTCCGTGGG +
Preference number: 4 (lower is better)
Translates to: NAVLMLHGSKPVVSLGDLGPGLV*QQQLRG
Trigger: CCCACGGAGCTGCTGCTGTCAGACCAACCCCGGGCC...GAGGTCCCCCAAAGAAACCACTGGTTTTGACCCATGAAGCATTAGAACTGCATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000334295.9
ENST00000383056.7
ENST00000593035.5
CDS-3UTR TCA 90 bp CCAGCTTCACACTCCATGTCATGTGGAAGCCATTGGTCATCAGGTAAAAGTTCTGGCCCGGGGTTGGTCTaGCAGCAGCAGCTCCGTGGG +
Preference number: 4 (lower is better)
Translates to: PASHSMSCGSHWSSGKSSGPGLV*QQQLRG
Trigger: CCCACGGAGCTGCTGCTGTCAGACCAACCCCGGGCC...AGAACTTTTACCTGATGACCAATGGCTTCCACATGACATGGAGTGTGAAGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000585635.5
ENST00000587207.1
CDS-3UTR TCA 90 bp TCTTCTGGGAACAGGACCTTAAACAGTTCCACAGGCTCGCCTCTTCAGAATGGCGTAGTTCTCGGCGCCTaGAAGCGCGGCGCAGTGATG +
Preference number: 4 (lower is better)
Translates to: SSGNRTLNSSTGSPLQNGVVLGA*KRGAVM
Trigger: CATCACTGCGCCGCGCTTTCAGGCGCCGAGAACTAC...GCCATTCTGAAGAGGCGAGCCTGTGGAACTGTTTAAGGTCCTGTTCCCAGAAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614939.4
CDS-3UTR TCA 90 bp TTGGCGCCTGCTGCACACGCTACAGCTCCGGGGCTTCATGCTGCTGACTCTTTGCAGGAGGCTTTTCTATaGTGGTCACCTCAGTCACAC +
Preference number: 4 (lower is better)
Translates to: LAPAAHATAPGLHAADSLQEAFL*WSPQSH
Trigger: GTGTGACTGAGGTGACCATCATAGAAAAGCCTCCTG...CAAAGAGTCAGCAGCATGAAGCCCCGGAGCTGTAGCGTGTGCAGCAGGCGCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610723.4
CDS-3UTR TCA 90 bp CCCTGTCCACAAATGTCAAGGAGCAGTCGGGGTGTGCCAGTGAGTCCCGGGAGCACATGGAAGACTGGGTaGGCTGAGTCAGTTTTGAGA +
Preference number: 4 (lower is better)
Translates to: PCPQMSRSSRGVPVSPGSTWKTG*AESVLR
Trigger: TCTCAAAACTGACTCAGCTCACCCAGTCTTCCATGT...GCTCCCGGGACTCACTGGCACACCCCGACTGCTCCTTGACATTTGTGGACAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587129.5
CDS-3UTR TCA 90 bp TGGCGCCTGCTGCACACGCTACAGCTCCGGGGCTTCATGCTGCTGACTCTTTGCACATGGAAGACTGGGTaGGCTGAGTCAGTTTTGAGA +
Preference number: 4 (lower is better)
Translates to: WRLLHTLQLRGFMLLTLCTWKTG*AESVLR
Trigger: TCTCAAAACTGACTCAGCTCACCCAGTCTTCCATGT...GCAAAGAGTCAGCAGCATGAAGCCCCGGAGCTGTAGCGTGTGCAGCAGGCGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610723.4
CDS-3UTR TCA 90 bp TTGAGTGACACCGCTGACCTCCTGGTTCCTCCGCTGCTTCACTTGTGGAATCCATGTTGGGAAGCAGGGTaGAGGCCTTGCTTCTGCCCA +
Preference number: 4 (lower is better)
Translates to: LSDTADLLVPPLLHLWNPCWEAG*RPCFCP
Trigger: TGGGCAGAAGCAAGGCCTTCACCCTGCTTCCCAACA...TGGATTCCACAAGTGAAGCAGCGGAGGAACCAGGAGGTCAGCGGTGTCACTCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334295.9
CDS-3UTR TCA 90 bp TGGCGCCTGCTGCACACGCTACAGCTCCGGGGCTTCATGCTGCTGACTCTTTGCGCCATAACTGAGGAATaGTTGCGACACTGTTGTTCC +
Preference number: 4 (lower is better)
Translates to: WRLLHTLQLRGFMLLTLCAITEE*LRHCCS
Trigger: GGAACAACAGTGTCGCAATCATTCCTCAGTTATGGC...GCAAAGAGTCAGCAGCATGAAGCCCCGGAGCTGTAGCGTGTGCAGCAGGCGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610723.4
CDS-3UTR TCA 90 bp TTGGGTCTTGTGGAACCCCTCGCTGTGCACTGGTTGCCTCACCTCATTTGTATTGGGGGACTGGAGTCTTaGCTGCCCTGTGCCTTGCTG +
Preference number: 4 (lower is better)
Translates to: LGLVEPLAVHWLPHLICIGGLES*LPCALL
Trigger: CAGCAAGGCACAGGGCAGTCAAGACTCCAGTCCCCC...AATACAAATGAGGTGAGGCAACCAGTGCACAGCGAGGGGTTCCACAAGACCCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590258.2
CDS-3UTR GCA 90 bp GGGACTAAAAGCCTTACAATTTTGGTCATTCAACTAGAAAGAGGCCTACGGTCCCCAGGTGCGGCTTGCTaGAGCCCAGCCCCGGGGACG +
Preference number: 4 (lower is better)
Translates to: GTKSLTILVIQLERGLRSPGAAC*SPAPGT
Trigger: CGTCCCCGGGGCTGGGCTGCAGCAAGCCGCACCTGG...GGACCGTAGGCCTCTTTCTAGTTGAATGACCAAAATTGTAAGGCTTTTAGTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 3 transcripts:
ENST00000334295.9
ENST00000383056.7
ENST00000593035.5
CDS-3UTR GCA 90 bp GTAAAGGTGTCTGTGAGAAAATGCCAGTATAACGCTCTGTCCAGGAACCAGATCTCTCCAGGTGCGGCTTaGTGCAGCCCAGCCCCGGGG +
Preference number: 4 (lower is better)
Translates to: VKVSVRKCQYNALSRNQISPGAA*CSPAPG
Trigger: CCCCGGGGCTGGGCTGCAGCAAGCCGCACCTGGAGA...GATCTGGTTCCTGGACAGAGCGTTATACTGGCATTTTCTCACAGACACCTTTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000585635.5
ENST00000591823.5
CDS-3UTR GCA 90 bp CCCTGTCCACAAATGTCAAGGAGCAGTCGGGGTGTGCCAGTGAGTCCCGGGAGCGGCAAACTTTCCCACTaGCATTGCATGAATCCAGCT +
Preference number: 4 (lower is better)
Translates to: PCPQMSRSSRGVPVSPGSGKLSH*HCMNPA
Trigger: AGCTGGATTCATGCAATGGCAGTGGGAAAGTTTGCC...GCTCCCGGGACTCACTGGCACACCCCGACTGCTCCTTGACATTTGTGGACAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587129.5
CDS-3UTR GCA 90 bp AAATTCCCCATTGCTTCCAGAGGCAGGGGACAGCACAACCTGCTCTGGAGGCCTGAGTGGAGTCAGTCCTaGTCTTCCCTGCTCACTCCT +
Preference number: 4 (lower is better)
Translates to: KFPIASRGRGQHNLLWRPEWSQS*SSLLTP
Trigger: AGGAGTGAGCAGGGAAGAGCAGGACTGACTCCACTC...AGGCCTCCAGAGCAGGTTGTGCTGTCCCCTGCCTCTGGAAGCAATGGGGAATTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334295.9
CDS-3UTR GCA 90 bp GCCCTGTCCACAAATGTCAAGGAGCAGTCGGGGTGTGCCAGTGAGTCCCGGGAGAGCTCTAGAACCTTCTaGTCCGGATTCCTGTTCTTC +
Preference number: 4 (lower is better)
Translates to: ALSTNVKEQSGCASESRESSRTF*SGFLFF
Trigger: GAAGAACAGGAATCCGGAGCAGAAGGTTCTAGAGCT...CTCCCGGGACTCACTGGCACACCCCGACTGCTCCTTGACATTTGTGGACAGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587129.5
CDS-3UTR GCA 90 bp CACTGTTGTTCCCATGCTGTTGGATTGGCGCCTGCTGCACACGCTACAGCTCCGACACTGTTGTTCCCATaGTGTTGGATTGGCGCCTGC +
Preference number: 4 (lower is better)
Translates to: HCCSHAVGLAPAAHATAPTLLFP*CWIGAC
Trigger: GCAGGCGCCAATCCAACAGCATGGGAACAACAGTGT...CGGAGCTGTAGCGTGTGCAGCAGGCGCCAATCCAACAGCATGGGAACAACAGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000591906.5
ENST00000610723.4
CDS-3UTR GCA 90 bp CCCTGGGCTTGGTTGGCACCTCGGAGTTGCAGCTGTGACACTCATAGGTTACTCTGCCCTCTGCACTTCTaGAGTTCACCCCCTTCTCAG +
Preference number: 4 (lower is better)
Translates to: PWAWLAPRSCSCDTHRLLCPLHF*SSPPSQ
Trigger: CTGAGAAGGGGGTGAACTGCAGAAGTGCAGAGGGCA...GAGTAACCTATGAGTGTCACAGCTGCAACTCCGAGGTGCCAACCAAGCCCAGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000590258.2
CDS-3UTR GCA 90 bp ATGCAGGTTCCTGGGCCCCACCCTAGATCTCCTGAATCAGATAGGGAAGTTGGGAGCTGCCACTGGGGATaGACACTTGGAGAACAGGGG +
Preference number: 4 (lower is better)
Translates to: MQVPGPHPRSPESDREVGSCHWG*TLGEQG
Trigger: CCCCTGTTCTCCAAGTGTGCATCCCCAGTGGCAGCT...CCCAACTTCCCTATCTGATTCAGGAGATCTAGGGTGGGGCCCAGGAACCTGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589049.5
CDS-3UTR GCA 90 bp GTTCTCTGGAGTCCCCTTGGCCAGCAGAGAGTCTGTTCACTTGGTTGGAGAGTTGCCAGTCCCCATGCCTaGAGAGACACAGCTCCTCAG +
Preference number: 4 (lower is better)
Translates to: VLWSPLGQQRVCSLGWRVASPHA*RDTAPQ
Trigger: CTGAGGAGCTGTGTCTCTGCAGGCATGGGGACTGGC...AACTCTCCAACCAAGTGAACAGACTCTCTGCTGGCCAAGGGGACTCCAGAGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000590842.5
ENST00000610723.4
CDS-3UTR GCA 90 bp GTTCTCTGGAGTCCCCTTGGCCAGCAGAGAGTCTGTTCACTTGGTTGGAGAGTTTGTGGCCAGTCCCCATaGCTGCAGAGACACAGCTCC +
Preference number: 4 (lower is better)
Translates to: VLWSPLGQQRVCSLGWRVCGQSP*LQRHSS
Trigger: GGAGCTGTGTCTCTGCAGGCATGGGGACTGGCCACA...AACTCTCCAACCAAGTGAACAGACTCTCTGCTGGCCAAGGGGACTCCAGAGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000590842.5
ENST00000610723.4
CDS-3UTR GCA 90 bp CTTAAACAGTTCCACAGGCTCGCCTCTTCAGAATGGCAAAACTCTTCTCAGTGTAATGGGGACCGAGCCTaGAGGCCGAGGCGTGGCGGC +
Preference number: 4 (lower is better)
Translates to: LKQFHRLASSEWQNSSQCNGDRA*RPRRGG
Trigger: GCCGCCACGCCTCGGCCTGCAGGCTCGGTCCCCATT...ACACTGAGAAGAGTTTTGCCATTCTGAAGAGGCGAGCCTGTGGAACTGTTTAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614939.4
CDS-3UTR GCA 90 bp CCCCTTGGCCAGCAGAGAGTCTGTTCACTTGGTTGGAGAGTTTTATTTGTAGTTCGGGCCTCTGCGTGGTaGGGCCAATGGGGACCGAGC +
Preference number: 4 (lower is better)
Translates to: PLGQQRVCSLGWRVLFVVRASAW*GQWGPS
Trigger: GCTCGGTCCCCATTGGCCGCACCACGCAGAGGCCCG...AACTACAAATAAAACTCTCCAACCAAGTGAACAGACTCTCTGCTGGCCAAGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000610723.4
CDS-3UTR CCA 90 bp GGGAACAGGACCTTAAACAGTTCCACAGGCTCGCCTCTTCAGAATGGCAAAACTATGGGGGCCCGGGGTTaGTCTGACAGCAGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: GNRTLNSSTGSPLQNGKTMGARG*SDSSSS
Trigger: GGAGCTGCTGCTGTCAGACCAACCCCGGGCCCCCAT...AGTTTTGCCATTCTGAAGAGGCGAGCCTGTGGAACTGTTTAAGGTCCTGTTCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000614939.4
CDS-3UTR CCA 90 bp GCCCTGTCCACAAATGTCAAGGAGCAGTCGGGGTGTGCCAGTGAGTCCCGGGAGACACTCCATGTCATGTaGAAGCCATTGGTCATCAGG +
Preference number: 4 (lower is better)
Translates to: ALSTNVKEQSGCASESRETLHVM*KPLVIR
Trigger: CCTGATGACCAATGGCTTCCACATGACATGGAGTGT...CTCCCGGGACTCACTGGCACACCCCGACTGCTCCTTGACATTTGTGGACAGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587129.5
CDS-3UTR CCA 90 bp CCCTGTCCACAAATGTCAAGGAGCAGTCGGGGTGTGCCAGTGAGTCCCGGGAGCCTGGCTGATCATCACTaGCTTCATGTGTATCGTCCT +
Preference number: 4 (lower is better)
Translates to: PCPQMSRSSRGVPVSPGSLADHH*LHVYRP
Trigger: AGGACGATACACATGAAGCCAGTGATGATCAGCCAG...GCTCCCGGGACTCACTGGCACACCCCGACTGCTCCTTGACATTTGTGGACAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587129.5
CDS-3UTR CCA 90 bp GCCCTGTCCACAAATGTCAAGGAGCAGTCGGGGTGTGCCAGTGAGTCCCGGGAGAAAGTGAGGCTTCTCTaGCTGATCATCACTGGCTTC +
Preference number: 4 (lower is better)
Translates to: ALSTNVKEQSGCASESREKVRLL*LIITGF
Trigger: GAAGCCAGTGATGATCAGCCAGAGAAGCCTCACTTT...CTCCCGGGACTCACTGGCACACCCCGACTGCTCCTTGACATTTGTGGACAGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587129.5
CDS-3UTR CCA 90 bp GGTCATTCAACTAGAAAGAGGCCTACGGTCCACACGCAAAACTGGAGGTCACCCAAGGCATATTGCCACTaGGGCAGGCCCAGGTGGGTG +
Preference number: 4 (lower is better)
Translates to: GHSTRKRPTVHTQNWRSPKAYCH*GRPRWV
Trigger: CACCCACCTGGGCCTGCCCCAGTGGCAATATGCCTT...GGGTGACCTCCAGTTTTGCGTGTGGACCGTAGGCCTCTTTCTAGTTGAATGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334295.9
ENST00000383056.7
ENST00000593035.5
CDS-3UTR CCA 90 bp GGGTCTTTGACTATCACATGGGGAAAGCTCAGAACCTGCACAGCCCACTCTGCAAAGGCATATTGCCACTaGGGCAGGCCCAGGTGGGTG +
Preference number: 4 (lower is better)
Translates to: GSLTITWGKLRTCTAHSAKAYCH*GRPRWV
Trigger: CACCCACCTGGGCCTGCCCCAGTGGCAATATGCCTT...TGCAGAGTGGGCTGTGCAGGTTCTGAGCTTTCCCCATGTGATAGTCAAAGACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587382.5
3UTR CAA 72 bp CAGCGTCACCCCATGGCTTGTGTTGCCTGCTACGCATaGACTTGGATCTCCAGGAGTCCCCTGCACATACCT +
Preference number: 4 (lower is better)
Translates to: QRHPMACVACYA*TWISRSPLHIP
Trigger: AGGTATGTGCAGGGGACTCCTGGAGATCCAAGTCAATGCGTAGCAGGCAACACAAGCCATGGGGTGACGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590258.2
CDS-3UTR TCA 90 bp GCTTCACACTCCATGTCATGTGGAAGCCATTGGTCATCAGGTAAAAGTTCTTCAGGCCCGGGGTTGGTCTaGCAGCAGCAGCTCCGTGGG +
Preference number: 4 (lower is better)
Translates to: ASHSMSCGSHWSSGKSSSGPGLV*QQQLRG
Trigger: CCCACGGAGCTGCTGCTGTCAGACCAACCCCGGGCC...TGAAGAACTTTTACCTGATGACCAATGGCTTCCACATGACATGGAGTGTGAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000585635.5
ENST00000587207.1
CDS-3UTR TCA 90 bp GGGACTAAAAGCCTTACAATTTTGGTCATTCAACTAGAAAGAGGCCTACGGTCCGGCCCGGGGTTGGTCTaGCAGCAGCAGCTCCGTGGG +
Preference number: 4 (lower is better)
Translates to: GTKSLTILVIQLERGLRSGPGLV*QQQLRG
Trigger: CCCACGGAGCTGCTGCTGTCAGACCAACCCCGGGCC...GGACCGTAGGCCTCTTTCTAGTTGAATGACCAAAATTGTAAGGCTTTTAGTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000334295.9
ENST00000383056.7
ENST00000593035.5
CDS-3UTR TCA 90 bp GGTTCTCTGGAGTCCCCTTGGCCAGCAGAGAGTCTGTTCACTTGGTTGGAGAGTATTCTAGGATGCGCGTaGTGCCCAGGGTCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: GSLESPWPAESLFTWLESILGCA*CPGSAS
Trigger: AGAAGCTGACCCTGGGCATCACGCGCATCCTAGAAT...ACTCTCCAACCAAGTGAACAGACTCTCTGCTGGCCAAGGGGACTCCAGAGAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590842.5
ENST00000610723.4
CDS-3UTR TCA 90 bp CCCCTAGGGCCATCTGTGCATGGAAACCACCACTCTGGAGCTGGTAGGGAGTTGCAGGAGGCTTTTCTATaGTGGTCACCTCAGTCACAC +
Preference number: 4 (lower is better)
Translates to: PLGPSVHGNHHSGAGRELQEAFL*WSPQSH
Trigger: GTGTGACTGAGGTGACCATCATAGAAAAGCCTCCTG...CAACTCCCTACCAGCTCCAGAGTGGTGGTTTCCATGCACAGATGGCCCTAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334295.9
ENST00000383056.7
ENST00000593035.5
CDS-3UTR TCA 90 bp CCCTGTCCACAAATGTCAAGGAGCAGTCGGGGTGTGCCAGTGAGTCCCGGGAGCCAGGAAGAAATCATATaGCGTTCAGCAGGAGGCTTT +
Preference number: 4 (lower is better)
Translates to: PCPQMSRSSRGVPVSPGSQEEII*RSAGGF
Trigger: AAAGCCTCCTGCTGAACGTCATATGATTTCTTCCTG...GCTCCCGGGACTCACTGGCACACCCCGACTGCTCCTTGACATTTGTGGACAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587129.5
CDS-3UTR TCA 90 bp GCCTGCAGAGACACAGCTCCTCAGCTCCCATTGGAGGGGCTCAACAGCCAGTTTTGCTTCCCAGTGGAATaGTGTGCTCATCCAGCTTCA +
Preference number: 4 (lower is better)
Translates to: ACRDTAPQLPLEGLNSQFCFPVE*CAHPAS
Trigger: TGAAGCTGGATGAGCACATCATTCCACTGGGAAGCA...AAACTGGCTGTTGAGCCCCTCCAATGGGAGCTGAGGAGCTGTGTCTCTGCAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610723.4
CDS-3UTR TCA 90 bp CACTGTTGTTCCCATGCTGTTGGATTGGCGCCTGCTGCACACGCTACAGCTCCGATGATGAGGTGTGTCTaGCCTCCCATCCTGTTATGG +
Preference number: 4 (lower is better)
Translates to: HCCSHAVGLAPAAHATAPMMRCV*PPILLW
Trigger: CCATAACAGGATGGGAGGTCAGACACACCTCATCAT...CGGAGCTGTAGCGTGTGCAGCAGGCGCCAATCCAACAGCATGGGAACAACAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000591906.5
ENST00000610723.4
CDS-3UTR TCA 90 bp TTGGCGCCTGCTGCACACGCTACAGCTCCGGGGCTTCATGCTGCTGACTCTTTGGACTTAACCCTTGGCTaGCATGGCTTTAGATCCTGT +
Preference number: 4 (lower is better)
Translates to: LAPAAHATAPGLHAADSLDLTLG*HGFRSC
Trigger: ACAGGATCTAAAGCCATGTCAGCCAAGGGTTAAGTC...CAAAGAGTCAGCAGCATGAAGCCCCGGAGCTGTAGCGTGTGCAGCAGGCGCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610723.4
CDS-3UTR GCA 90 bp ATGTCATGTGGAAGCCATTGGTCATCAGGTAAAAGTTCTTCACATCTTCAGGCACCAGGTGCGGCTTGCTaGAGCCCAGCCCCGGGGACG +
Preference number: 4 (lower is better)
Translates to: MSCGSHWSSGKSSSHLQAPGAAC*SPAPGT
Trigger: CGTCCCCGGGGCTGGGCTGCAGCAAGCCGCACCTGG...TGCCTGAAGATGTGAAGAACTTTTACCTGATGACCAATGGCTTCCACATGACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000585635.5
ENST00000587207.1
ENST00000590692.5
ENST00000591823.5
CDS-3UTR GCA 90 bp TCCAGTGCCGTTGGCTCTTCCTTTGATCAATTCTGGCAAGAAAAATACTTCTGGTCTCCAGGTGCGGCTTaGTGCAGCCCAGCCCCGGGG +
Preference number: 4 (lower is better)
Translates to: SSAVGSSFDQFWQEKYFWSPGAA*CSPAPG
Trigger: CCCCGGGGCTGGGCTGCAGCAAGCCGCACCTGGAGA...CCAGAAGTATTTTTCTTGCCAGAATTGATCAAAGGAAGAGCCAACGGCACTGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334295.9
CDS-3UTR GCA 90 bp GGGACTAAAAGCCTTACAATTTTGGTCATTCAACTAGAAAGAGGCCTACGGTCCTCTCCAGGTGCGGCTTaGTGCAGCCCAGCCCCGGGG +
Preference number: 4 (lower is better)
Translates to: GTKSLTILVIQLERGLRSSPGAA*CSPAPG
Trigger: CCCCGGGGCTGGGCTGCAGCAAGCCGCACCTGGAGA...GGACCGTAGGCCTCTTTCTAGTTGAATGACCAAAATTGTAAGGCTTTTAGTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000334295.9
ENST00000383056.7
ENST00000593035.5
CDS-3UTR GCA 90 bp TGTGGAAGCCATTGGTCATCAGGTAAAAGTTCTTCACATCTTCAGGCATCACACTCTCCAGGTGCGGCTTaGTGCAGCCCAGCCCCGGGG +
Preference number: 4 (lower is better)
Translates to: CGSHWSSGKSSSHLQASHSPGAA*CSPAPG
Trigger: CCCCGGGGCTGGGCTGCAGCAAGCCGCACCTGGAGA...GTGTGATGCCTGAAGATGTGAAGAACTTTTACCTGATGACCAATGGCTTCCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000585635.5
ENST00000587207.1
ENST00000590692.5
ENST00000591823.5
CDS-3UTR GCA 90 bp ATCCTGTGGACTGCTCTTAGTTCCCCAGTGGGTTTGGAAGAGGGAAACCCTGGGATCGTCCTCCAGGTCTaGCAGAGTGGGTGCATTAGG +
Preference number: 4 (lower is better)
Translates to: ILWTALSSPVGLEEGNPGIVLQV*QSGCIR
Trigger: CCTAATGCACCCACTCTGGCAGACCTGGAGGACGAT...CCCAGGGTTTCCCTCTTCCAAACCCACTGGGGAACTAAGAGCAGTCCACAGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334295.9
CDS-3UTR GCA 90 bp CCCTGTCCACAAATGTCAAGGAGCAGTCGGGGTGTGCCAGTGAGTCCCGGGAGCGCTCAAATATCACACTaGGAGAGTCAAAGTGAGGCT +
Preference number: 4 (lower is better)
Translates to: PCPQMSRSSRGVPVSPGSAQISH*ESQSEA
Trigger: AGCCTCACTTTGACTCTCGCAGTGTGATATTTGAGC...GCTCCCGGGACTCACTGGCACACCCCGACTGCTCCTTGACATTTGTGGACAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587129.5
CDS-3UTR GCA 90 bp CCCTGTCCACAAATGTCAAGGAGCAGTCGGGGTGTGCCAGTGAGTCCCGGGAGCGTGTCTGTGAGAAAATaGCAGTATAACGCTCTGTCC +
Preference number: 4 (lower is better)
Translates to: PCPQMSRSSRGVPVSPGSVSVRK*QYNALS
Trigger: GGACAGAGCGTTATACTGGCATTTTCTCACAGACAC...GCTCCCGGGACTCACTGGCACACCCCGACTGCTCCTTGACATTTGTGGACAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587129.5
CDS-3UTR GCA 90 bp TTGGGTCTTGTGGAACCCCTCGCTGTGCACTGGTTGCCTCACCTCATTTGTATTCTGGTGAAGGCATATTaGCACTGGGGCAGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: LGLVEPLAVHWLPHLICILVKAY*HWGRPR
Trigger: CCTGGGCCTGCCCCAGTGGCAATATGCCTTCACCAG...AATACAAATGAGGTGAGGCAACCAGTGCACAGCGAGGGGTTCCACAAGACCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590258.2
CDS-3UTR GCA 90 bp TCTTCTGGGAACAGGACCTTAAACAGTTCCACAGGCTCGCCTCTTCAGAATGGCCTGGTGAAGGCATATTaGCACTGGGGCAGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: SSGNRTLNSSTGSPLQNGLVKAY*HWGRPR
Trigger: CCTGGGCCTGCCCCAGTGGCAATATGCCTTCACCAG...GCCATTCTGAAGAGGCGAGCCTGTGGAACTGTTTAAGGTCCTGTTCCCAGAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000590258.2
ENST00000590652.5
ENST00000614939.4
CDS-3UTR GCA 90 bp CCCCTAGGGCCATCTGTGCATGGAAACCACCACTCTGGAGCTGGTAGGGAGTTGTTCCAAATTCCCCATTaGTTCCAGAGGCAGGGGACA +
Preference number: 4 (lower is better)
Translates to: PLGPSVHGNHHSGAGRELFQIPH*FQRQGT
Trigger: TGTCCCCTGCCTCTGGAAGCAATGGGGAATTTGGAA...CAACTCCCTACCAGCTCCAGAGTGGTGGTTTCCATGCACAGATGGCCCTAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000334295.9
ENST00000383056.7
ENST00000593035.5
CDS-3UTR GCA 90 bp CAGGACCTTAAACAGTTCCACAGGCTCGCCTCTTCAGAATGGCAAAACTCTTCTGGTGTGGCCTGCAGATaGATGAGGTGGGCCCTGGCC +
Preference number: 4 (lower is better)
Translates to: QDLKQFHRLASSEWQNSSGVACR*MRWALA
Trigger: GGCCAGGGCCCACCTCATGCATCTGCAGGCCACACC...AGAAGAGTTTTGCCATTCTGAAGAGGCGAGCCTGTGGAACTGTTTAAGGTCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590258.2
CDS-3UTR GCA 90 bp GTCAGAAACTCAGTTTCTAAGGTTCTCTGGAGTCCCCTTGGCCAGCAGAGAGTCTGTGGCCAGTCCCCATaGCTGCAGAGACACAGCTCC +
Preference number: 4 (lower is better)
Translates to: VRNSVSKVLWSPLGQQRVCGQSP*LQRHSS
Trigger: GGAGCTGTGTCTCTGCAGGCATGGGGACTGGCCACA...GACTCTCTGCTGGCCAAGGGGACTCCAGAGAACCTTAGAAACTGAGTTTCTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000590842.5
ENST00000610723.4
CDS-3UTR CCA 90 bp TCAACTAGAAAGAGGCCTACGGTCCACACGCAAAACTGGAGGTCACCCCTAGGGCCGAGGCCAATTTCATaGCATGCCGGGAACGGTAGT +
Preference number: 4 (lower is better)
Translates to: STRKRPTVHTQNWRSPLGPRPIS*HAGNGS
Trigger: ACTACCGTTCCCGGCATGCCATGAAATTGGCCTCGG...CCCTAGGGGTGACCTCCAGTTTTGCGTGTGGACCGTAGGCCTCTTTCTAGTTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334295.9
ENST00000383056.7
ENST00000593035.5
CDS-3UTR CCA 90 bp GTTTCTAAGGTTCTCTGGAGTCCCCTTGGCCAGCAGAGAGTCTGTTCACTTGGTAAGGCATATTGCCACTaGGGCAGGCCCAGGTGGGTG +
Preference number: 4 (lower is better)
Translates to: VSKVLWSPLGQQRVCSLGKAYCH*GRPRWV
Trigger: CACCCACCTGGGCCTGCCCCAGTGGCAATATGCCTT...ACCAAGTGAACAGACTCTCTGCTGGCCAAGGGGACTCCAGAGAACCTTAGAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590842.5
ENST00000591906.5
CDS-3UTR CCA 90 bp GGTTCTCTGGAGTCCCCTTGGCCAGCAGAGAGTCTGTTCACTTGGTTGGAGAGTCTGACTCTTTGCTTGTaGCCAGTCCCCATGCCTGCA +
Preference number: 4 (lower is better)
Translates to: GSLESPWPAESLFTWLESLTLCL*PVPMPA
Trigger: TGCAGGCATGGGGACTGGCCACAAGCAAAGAGTCAG...ACTCTCCAACCAAGTGAACAGACTCTCTGCTGGCCAAGGGGACTCCAGAGAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000590842.5
ENST00000610723.4
3UTR CAA 72 bp CAAAACTCTTCTCAGTGTCCTCAGAAGCACCCTCGCTaGGAACGGCCTTCAGATCCTTTGGGGGAGACAGGG +
Preference number: 4 (lower is better)
Translates to: QNSSQCPQKHPR*ERPSDPLGETG
Trigger: CCCTGTCTCCCCCAAAGGATCTGAAGGCCGTTCCAAGCGAGGGTGCTTCTGAGGACACTGAGAAGAGTTTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590652.5
CDS-3UTR TCA 90 bp TGGAGTCCCCTTGGCCAGCAGAGAGTCTGTTCACTTGGTTGGAGAGTTTTATTTGTAGTTCTCGGCGCCTaGAAGCGCGGCGCAGTGATG +
Preference number: 4 (lower is better)
Translates to: WSPLGQQRVCSLGWRVLFVVLGA*KRGAVM
Trigger: CATCACTGCGCCGCGCTTTCAGGCGCCGAGAACTAC...AAATAAAACTCTCCAACCAAGTGAACAGACTCTCTGCTGGCCAAGGGGACTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610723.4
CDS-3UTR TCA 90 bp GGACTGCTCTTAGTTCCCCAGTGGGTTTGGAAGAGGGAAACCCTGGGTCGATTAATTCTAGGATGCGCGTaGTGCCCAGGGTCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: GLLLVPQWVWKRETLGRLILGCA*CPGSAS
Trigger: AGAAGCTGACCCTGGGCATCACGCGCATCCTAGAAT...TAATCGACCCAGGGTTTCCCTCTTCCAAACCCACTGGGGAACTAAGAGCAGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334295.9
CDS-3UTR TCA 90 bp CACACGCAAAACTGGAGGTCACCCCTAGGGCCATCTGTGCATGGAAACCACCACCAGGAGGCTTTTCTATaGTGGTCACCTCAGTCACAC +
Preference number: 4 (lower is better)
Translates to: HTQNWRSPLGPSVHGNHHQEAFL*WSPQSH
Trigger: GTGTGACTGAGGTGACCATCATAGAAAAGCCTCCTG...GTGGTGGTTTCCATGCACAGATGGCCCTAGGGGTGACCTCCAGTTTTGCGTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000334295.9
ENST00000383056.7
ENST00000593035.5
CDS-3UTR TCA 90 bp CCCTGTCCACAAATGTCAAGGAGCAGTCGGGGTGTGCCAGTGAGTCCCGGGAGCGAGCTGAGTCAGTTTTaGGATGCTGTTAATTGCCAT +
Preference number: 4 (lower is better)
Translates to: PCPQMSRSSRGVPVSPGSELSQF*DAVNCH
Trigger: ATGGCAATTAACAGCATCTCAAAACTGACTCAGCTC...GCTCCCGGGACTCACTGGCACACCCCGACTGCTCCTTGACATTTGTGGACAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587129.5
CDS-3UTR TCA 90 bp GTTGTTCCCATGCTGTTGGATTGGCGCCTGCTGCACACGCTACAGCTCCGGGGCGAGCTGAGTCAGTTTTaGGATGCTGTTAATTGCCAT +
Preference number: 4 (lower is better)
Translates to: VVPMLLDWRLLHTLQLRGELSQF*DAVNCH
Trigger: ATGGCAATTAACAGCATCTCAAAACTGACTCAGCTC...GCCCCGGAGCTGTAGCGTGTGCAGCAGGCGCCAATCCAACAGCATGGGAACAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000591906.5
ENST00000610723.4
CDS-3UTR TCA 90 bp CCCCAGTGGGTTTGGAAGAGGGAAACCCTGGGTCGATTAGCAGGTAGACAGTGCGCTTGCCCTGATCCTTaGAGGCTAACTCTTCACCTT +
Preference number: 4 (lower is better)
Translates to: PQWVWKRETLGRLAGRQCACPDP*RLTLHL
Trigger: AAGGTGAAGAGTTAGCCTTCAAGGATCAGGGCAAGC...GCACTGTCTACCTGCTAATCGACCCAGGGTTTCCCTCTTCCAAACCCACTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334295.9
CDS-3UTR TCA 90 bp GTTTCTAAGGTTCTCTGGAGTCCCCTTGGCCAGCAGAGAGTCTGTTCACTTGGTGGGGCTTCATGCTGCTaGCTCTTTGCTTGTGGCCAG +
Preference number: 4 (lower is better)
Translates to: VSKVLWSPLGQQRVCSLGGASCC*LFACGQ
Trigger: CTGGCCACAAGCAAAGAGTCAGCAGCATGAAGCCCC...ACCAAGTGAACAGACTCTCTGCTGGCCAAGGGGACTCCAGAGAACCTTAGAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000590842.5
ENST00000591906.5
ENST00000610723.4
CDS-3UTR TCA 90 bp CTGTTGTTCCCATGCTGTTGGATTGGCGCCTGCTGCACACGCTACAGCTCCGGGCATTCTTGCCATAACTaGGGAATGATTGCGACACTG +
Preference number: 4 (lower is better)
Translates to: LLFPCCWIGACCTRYSSGHSCHN*GMIATL
Trigger: CAGTGTCGCAATCATTCCTCAGTTATGGCAAGAATG...CCCGGAGCTGTAGCGTGTGCAGCAGGCGCCAATCCAACAGCATGGGAACAACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000591906.5
ENST00000610723.4
CDS-3UTR GCA 90 bp GTTCTCTGGAGTCCCCTTGGCCAGCAGAGAGTCTGTTCACTTGGTTGGAGAGTTATCGTCCTCCAGGTCTaGCAGAGTGGGTGCATTAGG +
Preference number: 4 (lower is better)
Translates to: VLWSPLGQQRVCSLGWRVIVLQV*QSGCIR
Trigger: CCTAATGCACCCACTCTGGCAGACCTGGAGGACGAT...AACTCTCCAACCAAGTGAACAGACTCTCTGCTGGCCAAGGGGACTCCAGAGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000590842.5
ENST00000591906.5
ENST00000610723.4
CDS-3UTR GCA 90 bp GCCCTGTCCACAAATGTCAAGGAGCAGTCGGGGTGTGCCAGTGAGTCCCGGGAGCTTTCCCACTGCCATTaGATGAATCCAGCTCAAATA +
Preference number: 4 (lower is better)
Translates to: ALSTNVKEQSGCASESRELSHCH*MNPAQI
Trigger: TATTTGAGCTGGATTCATGCAATGGCAGTGGGAAAG...CTCCCGGGACTCACTGGCACACCCCGACTGCTCCTTGACATTTGTGGACAGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587129.5
CDS-3UTR GCA 90 bp TTCTTCTGGGAACAGGACCTTAAACAGTTCCACAGGCTCGCCTCTTCAGAATGGCTGGTGAAGGCATATTaGCACTGGGGCAGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: FFWEQDLKQFHRLASSEWLVKAY*HWGRPR
Trigger: CCTGGGCCTGCCCCAGTGGCAATATGCCTTCACCAG...CCATTCTGAAGAGGCGAGCCTGTGGAACTGTTTAAGGTCCTGTTCCCAGAAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000590258.2
ENST00000590652.5
ENST00000614939.4
CDS-3UTR GCA 90 bp ACTCAGTTTCTAAGGTTCTCTGGAGTCCCCTTGGCCAGCAGAGAGTCTGTTCACTGTGGCCAGTCCCCATaGCTTGGCCTGTGGGCTAAT +
Preference number: 4 (lower is better)
Translates to: TQFLRFSGVPLASRESVHCGQSP*LGLWAN
Trigger: ATTAGCCCACAGGCCAAGGCATGGGGACTGGCCACA...GTGAACAGACTCTCTGCTGGCCAAGGGGACTCCAGAGAACCTTAGAAACTGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591906.5
CDS-3UTR GCA 90 bp TGGAGTCCCCTTGGCCAGCAGAGAGTCTGTTCACTTGGTTGGAGAGTTTTATTTTGGATTGGCGCCTGCTaGACACGCTACAGCTCCGGG +
Preference number: 4 (lower is better)
Translates to: WSPLGQQRVCSLGWRVLFWIGAC*TRYSSG
Trigger: CCCGGAGCTGTAGCGTGTGCAGCAGGCGCCAATCCA...AAATAAAACTCTCCAACCAAGTGAACAGACTCTCTGCTGGCCAAGGGGACTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000590842.5
ENST00000591906.5
ENST00000610723.4
CDS-3UTR GCA 90 bp GTTTCTAAGGTTCTCTGGAGTCCCCTTGGCCAGCAGAGAGTCTGTTCACTTGGTTGTTGGATTGGCGCCTaGTGCACACGCTACAGCTCC +
Preference number: 4 (lower is better)
Translates to: VSKVLWSPLGQQRVCSLGCWIGA*CTRYSS
Trigger: GGAGCTGTAGCGTGTGCAGCAGGCGCCAATCCAACA...ACCAAGTGAACAGACTCTCTGCTGGCCAAGGGGACTCCAGAGAACCTTAGAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000590842.5
ENST00000591906.5
ENST00000610723.4
CDS-3UTR GCA 90 bp GTTGGGTCTTGTGGAACCCCTCGCTGTGCACTGGTTGCCTCACCTCATTTGTATGACCTGCACCACCACTaGAGTGCGAAGAACCCTGAA +
Preference number: 4 (lower is better)
Translates to: VGSCGTPRCALVASPHLYDLHHH*SAKNPE
Trigger: TTCAGGGTTCTTCGCACTGCAGTGGTGGTGCAGGTC...ATACAAATGAGGTGAGGCAACCAGTGCACAGCGAGGGGTTCCACAAGACCCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590258.2
CDS-3UTR GCA 90 bp TCTTCTGGGAACAGGACCTTAAACAGTTCCACAGGCTCGCCTCTTCAGAATGGCCCTTTGGGTGTGACCTaGACCACCACTGCAGTGCGA +
Preference number: 4 (lower is better)
Translates to: SSGNRTLNSSTGSPLQNGPLGVT*TTTAVR
Trigger: TCGCACTGCAGTGGTGGTGCAGGTCACACCCAAAGG...GCCATTCTGAAGAGGCGAGCCTGTGGAACTGTTTAAGGTCCTGTTCCCAGAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590258.2
CDS-3UTR GCA 90 bp GTCCCCTGCACATACCTTCTCCATCGTGTCAGCTGTGTTTCTCTTGATTCCGTGCTCACTGCTGCCCCTTaGCCTGGCTTCATGCACTTG +
Preference number: 4 (lower is better)
Translates to: VPCTYLLHRVSCVSLDSVLTAAP*PGFMHL
Trigger: CAAGTGCATGAAGCCAGGGCAAGGGGCAGCAGTGAG...CACGGAATCAAGAGAAACACAGCTGACACGATGGAGAAGGTATGTGCAGGGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590258.2
CDS-3UTR CCA 90 bp AGAAAATGCCAGTATAACGCTCTGTCCAGGAACCAGATCTCAGTGTCTTCTGCTATGGGGGCCCGGGGTTaGTCTGACAGCAGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: RKCQYNALSRNQISVSSAMGARG*SDSSSS
Trigger: GGAGCTGCTGCTGTCAGACCAACCCCGGGCCCCCAT...AGCAGAAGACACTGAGATCTGGTTCCTGGACAGAGCGTTATACTGGCATTTTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000585635.5
CDS-3UTR CCA 90 bp GACCTTAAACAGTTCCACAGGCTCGCCTCTTCAGAATGGCAAAACTCTTCTCAGATGCCTCCTCCTCCATaGCTCGCGACCGCGATTCGC +
Preference number: 4 (lower is better)
Translates to: DLKQFHRLASSEWQNSSQMPPPP*LATAIR
Trigger: GCGAATCGCGGTCGCGAGCCATGGAGGAGGAGGCAT...CTGAGAAGAGTTTTGCCATTCTGAAGAGGCGAGCCTGTGGAACTGTTTAAGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614939.4
CDS-3UTR CCA 90 bp CACTGTTGTTCCCATGCTGTTGGATTGGCGCCTGCTGCACACGCTACAGCTCCGCTGGCTGATCATCACTaGCTTCATGTGTATCGTCCT +
Preference number: 4 (lower is better)
Translates to: HCCSHAVGLAPAAHATAPLADHH*LHVYRP
Trigger: AGGACGATACACATGAAGCCAGTGATGATCAGCCAG...CGGAGCTGTAGCGTGTGCAGCAGGCGCCAATCCAACAGCATGGGAACAACAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591906.5
CDS-3UTR CCA 90 bp TCTGTGCATGGAAACCACCACTCTGGAGCTGGTAGGGAGTTGGAGGGAGGGGTGAAAGTGAGGCTTCTCTaGCTGATCATCACTGGCTTC +
Preference number: 4 (lower is better)
Translates to: SVHGNHHSGAGRELEGGVKVRLL*LIITGF
Trigger: GAAGCCAGTGATGATCAGCCAGAGAAGCCTCACTTT...CACCCCTCCCTCCAACTCCCTACCAGCTCCAGAGTGGTGGTTTCCATGCACAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334295.9
ENST00000593035.5
CDS-3UTR CCA 90 bp TCTCTGAACTTTGATCAACAGCCTGCCCTGGTCATCTCAGGAACTCTGGCTGATAAGGCATATTGCCACTaGGGCAGGCCCAGGTGGGTG +
Preference number: 4 (lower is better)
Translates to: SLNFDQQPALVISGTLADKAYCH*GRPRWV
Trigger: CACCCACCTGGGCCTGCCCCAGTGGCAATATGCCTT...ATCAGCCAGAGTTCCTGAGATGACCAGGGCAGGCTGTTGATCAAAGTTCAGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590258.2
CDS-3UTR CCA 90 bp TTCTGGGAACAGGACCTTAAACAGTTCCACAGGCTCGCCTCTTCAGAATGGCAAAAGGCATATTGCCACTaGGGCAGGCCCAGGTGGGTG +
Preference number: 4 (lower is better)
Translates to: FWEQDLKQFHRLASSEWQKAYCH*GRPRWV
Trigger: CACCCACCTGGGCCTGCCCCAGTGGCAATATGCCTT...TTGCCATTCTGAAGAGGCGAGCCTGTGGAACTGTTTAAGGTCCTGTTCCCAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000590258.2
ENST00000590652.5
ENST00000614939.4
CDS-3UTR CCA 90 bp AGAAAGAGGCCTACGGTCCACACGCAAAACTGGAGGTCACCCCTAGGGCCATCTCTCTTAGTTCCCCAGTaGGTTTGGAAGAGGGAAACC +
Preference number: 4 (lower is better)
Translates to: RKRPTVHTQNWRSPLGPSLLVPQ*VWKRET
Trigger: GGTTTCCCTCTTCCAAACCCACTGGGGAACTAAGAG...AGATGGCCCTAGGGGTGACCTCCAGTTTTGCGTGTGGACCGTAGGCCTCTTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000334295.9
CDS-3UTR CCA 90 bp GACCTTAAACAGTTCCACAGGCTCGCCTCTTCAGAATGGCAAAACTCTTCTCAGCCAGAGCCCTGGGCTTaGTTGGCACCTCGGAGTTGC +
Preference number: 4 (lower is better)
Translates to: DLKQFHRLASSEWQNSSQPEPWA*LAPRSC
Trigger: GCAACTCCGAGGTGCCAACCAAGCCCAGGGCTCTGG...CTGAGAAGAGTTTTGCCATTCTGAAGAGGCGAGCCTGTGGAACTGTTTAAGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590258.2
CDS-3UTR CCA 90 bp CAGGACCTTAAACAGTTCCACAGGCTCGCCTCTTCAGAATGGCAAAACTCTTCTGTGGGCCCTGGCCTCTaGGGAGTAGATGAGGGGAGT +
Preference number: 4 (lower is better)
Translates to: QDLKQFHRLASSEWQNSSVGPGL*GVDEGS
Trigger: ACTCCCCTCATCTACTCCCCAGAGGCCAGGGCCCAC...AGAAGAGTTTTGCCATTCTGAAGAGGCGAGCCTGTGGAACTGTTTAAGGTCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590258.2
CDS-3UTR CCA 90 bp TATTGTTGGTCGTCTGTTGGATTTGTGAGGTTGTTGGGTCTTGTGGAACCCCTCTGCAGATGCATGAGGTaGGCCCTGGCCTCTGGGGAG +
Preference number: 4 (lower is better)
Translates to: YCWSSVGFVRLLGLVEPLCRCMR*ALASGE
Trigger: CTCCCCAGAGGCCAGGGCCCACCTCATGCATCTGCA...GAGGGGTTCCACAAGACCCAACAACCTCACAAATCCAACAGACGACCAACAATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590258.2
CDS-3UTR CCA 90 bp CTGGAGTCCCCTTGGCCAGCAGAGAGTCTGTTCACTTGGTTGGAGAGTTTTATTAGTGCCGCGGCGTTCTaGAGCCGGGACTGTATCCTT +
Preference number: 4 (lower is better)
Translates to: LESPWPAESLFTWLESFISAAAF*SRDCIL
Trigger: AAGGATACAGTCCCGGCTCCAGAACGCCGCGGCACT...AATAAAACTCTCCAACCAAGTGAACAGACTCTCTGCTGGCCAAGGGGACTCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610723.4
CDS-3UTR CCA 90 bp GACCTTAAACAGTTCCACAGGCTCGCCTCTTCAGAATGGCAAAACTCTTCTCAGGCGCGACGCCCCGAGTaGCGGTTGTTTCAAGATGGC +
Preference number: 4 (lower is better)
Translates to: DLKQFHRLASSEWQNSSQARRPE*RLFQDG
Trigger: GCCATCTTGAAACAACCGCCACTCGGGGCGTCGCGC...CTGAGAAGAGTTTTGCCATTCTGAAGAGGCGAGCCTGTGGAACTGTTTAAGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614939.4
CDS-3UTR TCA 90 bp AATGCAGTTCTAATGCTTCATGGGTCAAAACCAGTGGTTTCTTTGGGGGACCTCGTAGTTCTCGGCGCCTaGAAGCGCGGCGCAGTGATG +
Preference number: 4 (lower is better)
Translates to: NAVLMLHGSKPVVSLGDLVVLGA*KRGAVM
Trigger: CATCACTGCGCCGCGCTTTCAGGCGCCGAGAACTAC...GAGGTCCCCCAAAGAAACCACTGGTTTTGACCCATGAAGCATTAGAACTGCATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000334295.9
ENST00000383056.7
ENST00000593035.5
CDS-3UTR TCA 90 bp CTGCCACCATGTAAGATGTGCCTTTCGCCTTCTGCCGTGATTGTGAGGCCTCTCCAGGAGGCTTTTCTATaGTGGTCACCTCAGTCACAC +
Preference number: 4 (lower is better)
Translates to: LPPCKMCLSPSAVIVRPLQEAFL*WSPQSH
Trigger: GTGTGACTGAGGTGACCATCATAGAAAAGCCTCCTG...GAGAGGCCTCACAATCACGGCAGAAGGCGAAAGGCACATCTTACATGGTGGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587382.5
CDS-3UTR TCA 90 bp GGTTCTCTGGAGTCCCCTTGGCCAGCAGAGAGTCTGTTCACTTGGTTGGAGAGTTGCTTCCCAGTGGAATaGTGTGCTCATCCAGCTTCA +
Preference number: 4 (lower is better)
Translates to: GSLESPWPAESLFTWLESCFPVE*CAHPAS
Trigger: TGAAGCTGGATGAGCACATCATTCCACTGGGAAGCA...ACTCTCCAACCAAGTGAACAGACTCTCTGCTGGCCAAGGGGACTCCAGAGAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000590842.5
ENST00000591906.5
ENST00000610723.4
CDS-3UTR TCA 90 bp AAATTCCCCATTGCTTCCAGAGGCAGGGGACAGCACAACCTGCTCTGGAGGCCTACATGGAAGACTGGGTaGGCTGAGTCAGTTTTGAGA +
Preference number: 4 (lower is better)
Translates to: KFPIASRGRGQHNLLWRPTWKTG*AESVLR
Trigger: TCTCAAAACTGACTCAGCTCACCCAGTCTTCCATGT...AGGCCTCCAGAGCAGGTTGTGCTGTCCCCTGCCTCTGGAAGCAATGGGGAATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000334295.9
CDS-3UTR TCA 90 bp TCTGTGCATGGAAACCACCACTCTGGAGCTGGTAGGGAGTTGGAGGGAGGGGTGTCAGTGCTAAGGGATTaGGGGTTGAGTGTTGAAGAA +
Preference number: 4 (lower is better)
Translates to: SVHGNHHSGAGRELEGGVSVLRD*GLSVEE
Trigger: TTCTTCAACACTCAACCCTCAATCCCTTAGCACTGA...CACCCCTCCCTCCAACTCCCTACCAGCTCCAGAGTGGTGGTTTCCATGCACAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334295.9
ENST00000383056.7
ENST00000593035.5
CDS-3UTR TCA 90 bp TTCTTCTGGGAACAGGACCTTAAACAGTTCCACAGGCTCGCCTCTTCAGAATGGCAAGCTCTTGCTGGATaGAACCCCTCCAGGTGGGGT +
Preference number: 4 (lower is better)
Translates to: FFWEQDLKQFHRLASSEWQALAG*NPSRWG
Trigger: ACCCCACCTGGAGGGGTTTCATCCAGCAAGAGCTTG...CCATTCTGAAGAGGCGAGCCTGTGGAACTGTTTAAGGTCCTGTTCCCAGAAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590258.2
CDS-3UTR TCA 90 bp TTCTTCTGGGAACAGGACCTTAAACAGTTCCACAGGCTCGCCTCTTCAGAATGGCTCCCAGGAGTGTGCTaGGCAGAAGGCAAGCTCTTG +
Preference number: 4 (lower is better)
Translates to: FFWEQDLKQFHRLASSEWLPGVC*AEGKLL
Trigger: CAAGAGCTTGCCTTCTGCTCAGCACACTCCTGGGAG...CCATTCTGAAGAGGCGAGCCTGTGGAACTGTTTAAGGTCCTGTTCCCAGAAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590258.2
CDS-3UTR TCA 90 bp GGGTCTTTGACTATCACATGGGGAAAGCTCAGAACCTGCACAGCCCACTCTGCACTGCCTTGGGGTCTTTaGCTATCACATGGGGAAAGC +
Preference number: 4 (lower is better)
Translates to: GSLTITWGKLRTCTAHSALPWGL*LSHGES
Trigger: GCTTTCCCCATGTGATAGTCAAAGACCCCAAGGCAG...TGCAGAGTGGGCTGTGCAGGTTCTGAGCTTTCCCCATGTGATAGTCAAAGACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000587382.5
CDS-3UTR TCA 90 bp CTGCCACCATGTAAGATGTGCCTTTCGCCTTCTGCCGTGATTGTGAGGCCTCTCGGAGGGCAAAGGAGATaGGCTGCTTTAAGATGCAGA +
Preference number: 4 (lower is better)
Translates to: LPPCKMCLSPSAVIVRPLGGQRR*AALRCR
Trigger: TCTGCATCTTAAAGCAGCTCATCTCCTTTGCCCTCC...GAGAGGCCTCACAATCACGGCAGAAGGCGAAAGGCACATCTTACATGGTGGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587382.5
CDS-3UTR TCA 90 bp ATATCACACTGCGAGAGTCAAAGTGAGGCTTCTCTGGCTGATCATCACTGGCTTGTCCTAGGATGCGCGTaGTGCCCAGGGTCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: ISHCESQSEASLADHHWLVLGCA*CPGSAS
Trigger: AGAAGCTGACCCTGGGCATCACGCGCATCCTAGGAC...AAGCCAGTGATGATCAGCCAGAGAAGCCTCACTTTGACTCTCGCAGTGTGATAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590692.5
ENST00000591823.5
CDS-3UTR GCA 90 bp CATCACACAGTTATTCTTTTGTTCCCAGGAAGAAATCATATGACGTTCAGCAGGTCTCCAGGTGCGGCTTaGTGCAGCCCAGCCCCGGGG +
Preference number: 4 (lower is better)
Translates to: HHTVILLFPGRNHMTFSRSPGAA*CSPAPG
Trigger: CCCCGGGGCTGGGCTGCAGCAAGCCGCACCTGGAGA...CCTGCTGAACGTCATATGATTTCTTCCTGGGAACAAAAGAATAACTGTGTGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000585635.5
ENST00000590692.5
ENST00000591823.5
CDS-3UTR GCA 90 bp CCCCTAGGGCCATCTGTGCATGGAAACCACCACTCTGGAGCTGGTAGGGAGTTGGTGTCTGTGAGAAAATaGCAGTATAACGCTCTGTCC +
Preference number: 4 (lower is better)
Translates to: PLGPSVHGNHHSGAGRELVSVRK*QYNALS
Trigger: GGACAGAGCGTTATACTGGCATTTTCTCACAGACAC...CAACTCCCTACCAGCTCCAGAGTGGTGGTTTCCATGCACAGATGGCCCTAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334295.9
ENST00000383056.7
ENST00000593035.5
CDS-3UTR GCA 90 bp TCAACTAGAAAGAGGCCTACGGTCCACACGCAAAACTGGAGGTCACCCCTAGGGTTCCAAATTCCCCATTaGTTCCAGAGGCAGGGGACA +
Preference number: 4 (lower is better)
Translates to: STRKRPTVHTQNWRSPLGFQIPH*FQRQGT
Trigger: TGTCCCCTGCCTCTGGAAGCAATGGGGAATTTGGAA...CCCTAGGGGTGACCTCCAGTTTTGCGTGTGGACCGTAGGCCTCTTTCTAGTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000334295.9
ENST00000383056.7
ENST00000593035.5
CDS-3UTR GCA 90 bp CTGGAGTCCCCTTGGCCAGCAGAGAGTCTGTTCACTTGGTTGGAGAGTTTTATTTGTTGGATTGGCGCCTaGTGCACACGCTACAGCTCC +
Preference number: 4 (lower is better)
Translates to: LESPWPAESLFTWLESFICWIGA*CTRYSS
Trigger: GGAGCTGTAGCGTGTGCAGCAGGCGCCAATCCAACA...AATAAAACTCTCCAACCAAGTGAACAGACTCTCTGCTGGCCAAGGGGACTCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000590842.5
ENST00000591906.5
ENST00000610723.4
CDS-3UTR GCA 90 bp CAGGAAGGTACAGAGTGTGAACCCTCTGGCTTCTCTGGAAGTCCCTGGGGAGAACTGGCTTCATGCACTTaGTCTGTGGGTCTTGAGCAT +
Preference number: 4 (lower is better)
Translates to: QEGTECEPSGFSGSPWGELASCT*SVGLEH
Trigger: ATGCTCAAGACCCACAGAGCAAGTGCATGAAGCCAG...TTCTCCCCAGGGACTTCCAGAGAAGCCAGAGGGTTCACACTCTGTACCTTCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590258.2
CDS-3UTR GCA 90 bp GTTCCTGGGCCCCACCCTAGATCTCCTGAATCAGATAGGGAAGTTGGGAACCTGCCTGGGTGCATGTACTaGCAACCCAGAACAAGTCAT +
Preference number: 4 (lower is better)
Translates to: VPGPHPRSPESDREVGNLPGCMY*QPRTSH
Trigger: ATGACTTGTTCTGGGTTGGCAGTACATGCACCCAGG...CAGGTTCCCAACTTCCCTATCTGATTCAGGAGATCTAGGGTGGGGCCCAGGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589049.5
CDS-3UTR CCA 90 bp CAGGTAAAAGTTCTTCACATCTTCAGGCATCACACAGTTATTCTTCTGGCTAATACAGCAGCAGCTCCGTaGGGCGCCGGTTCCCGCGGC +
Preference number: 4 (lower is better)
Translates to: QVKVLHIFRHHTVILLANTAAAP*GAGSRG
Trigger: GCCGCGGGAACCGGCGCCCCACGGAGCTGCTGCTGT...ATTAGCCAGAAGAATAACTGTGTGATGCCTGAAGATGTGAAGAACTTTTACCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587207.1
CDS-3UTR CCA 90 bp AGAAAGAGGCCTACGGTCCACACGCAAAACTGGAGGTCACCCCTAGGGCCATCTACACTCCATGTCATGTaGAAGCCATTGGTCATCAGG +
Preference number: 4 (lower is better)
Translates to: RKRPTVHTQNWRSPLGPSTLHVM*KPLVIR
Trigger: CCTGATGACCAATGGCTTCCACATGACATGGAGTGT...AGATGGCCCTAGGGGTGACCTCCAGTTTTGCGTGTGGACCGTAGGCCTCTTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334295.9
ENST00000383056.7
ENST00000593035.5
CDS-3UTR CCA 90 bp AGAAAGAGGCCTACGGTCCACACGCAAAACTGGAGGTCACCCCTAGGGCCATCTATGGGTCAAAACCAGTaGTTTCTTTGGGGGACCTCT +
Preference number: 4 (lower is better)
Translates to: RKRPTVHTQNWRSPLGPSMGQNQ*FLWGTS
Trigger: AGAGGTCCCCCAAAGAAACCACTGGTTTTGACCCAT...AGATGGCCCTAGGGGTGACCTCCAGTTTTGCGTGTGGACCGTAGGCCTCTTTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000334295.9
ENST00000383056.7
ENST00000593035.5
CDS-3UTR CCA 90 bp TTCTCTGGAGTCCCCTTGGCCAGCAGAGAGTCTGTTCACTTGGTTGGAGAGTTTCCATGCCTTGGCCTGTaGGCTAATGCCATAGCTGGT +
Preference number: 4 (lower is better)
Translates to: FSGVPLASRESVHLVGEFPCLGL*ANAIAG
Trigger: ACCAGCTATGGCATTAGCCCACAGGCCAAGGCATGG...AAACTCTCCAACCAAGTGAACAGACTCTCTGCTGGCCAAGGGGACTCCAGAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591906.5
CDS-3UTR CCA 90 bp AGGACCTTAAACAGTTCCACAGGCTCGCCTCTTCAGAATGGCAAAACTCTTCTCAGCCCTGGGCTTGGTTaGCACCTCGGAGTTGCAGCT +
Preference number: 4 (lower is better)
Translates to: RTLNSSTGSPLQNGKTLLSPGLG*HLGVAA
Trigger: AGCTGCAACTCCGAGGTGCCAACCAAGCCCAGGGCT...GAGAAGAGTTTTGCCATTCTGAAGAGGCGAGCCTGTGGAACTGTTTAAGGTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590258.2
CDS-3UTR CCA 90 bp TTCTGGGAACAGGACCTTAAACAGTTCCACAGGCTCGCCTCTTCAGAATGGCAACACCCCAGGAGAGCCTaGAACTTGCGAGAGTTGGGT +
Preference number: 4 (lower is better)
Translates to: FWEQDLKQFHRLASSEWQHPRRA*NLRELG
Trigger: ACCCAACTCTCGCAAGTTCCAGGCTCTCCTGGGGTG...TTGCCATTCTGAAGAGGCGAGCCTGTGGAACTGTTTAAGGTCCTGTTCCCAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590652.5
CDS-3UTR CCA 90 bp GGGGAAAGCTCAGAACCTGCACAGCCCACTCTGCAGCTAAAATGGGTAGCAGCACACAGCTTTCCACACTaGAGACTGTGCAGAGACCTA +
Preference number: 4 (lower is better)
Translates to: GESSEPAQPTLQLKWVAAHSFPH*RLCRDL
Trigger: TAGGTCTCTGCACAGTCTCCAGTGTGGAAAGCTGTG...TGCTGCTACCCATTTTAGCTGCAGAGTGGGCTGTGCAGGTTCTGAGCTTTCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587382.5
CDS-3UTR CCA 90 bp TTATTCTTCTGGGAACAGGACCTTAAACAGTTCCACAGGCTCGCCTCTTCAGAAGCGGTTGTTTCAAGATaGCGGACGTGGCGGGCCCCT +
Preference number: 4 (lower is better)
Translates to: LFFWEQDLKQFHRLASSEAVVSR*RTWRAP
Trigger: AGGGGCCCGCCACGTCCGCCATCTTGAAACAACCGC...TTCTGAAGAGGCGAGCCTGTGGAACTGTTTAAGGTCCTGTTCCCAGAAGAATAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614939.4
CDS-3UTR CCA 90 bp CCCCTTGGCCAGCAGAGAGTCTGTTCACTTGGTTGGAGAGTTTTATTTGTAGTTGCGCGACGCCCCGAGTaGCGGTTGTTTCAAGATGGC +
Preference number: 4 (lower is better)
Translates to: PLGQQRVCSLGWRVLFVVARRPE*RLFQDG
Trigger: GCCATCTTGAAACAACCGCCACTCGGGGCGTCGCGC...AACTACAAATAAAACTCTCCAACCAAGTGAACAGACTCTCTGCTGGCCAAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000610723.4
3UTR CAA 72 bp ACAGCCACCAATTCCAGCCAGAATAAGTTTGGCAGTTaGCTCCTTAGCCTCCATTCCTCGAGGAGCCACTGG +
Preference number: 4 (lower is better)
Translates to: TATNSSQNKFGS*LLSLHSSRSHW
Trigger: CCAGTGGCTCCTCGAGGAATGGAGGCTAAGGAGCAAACTGCCAAACTTATTCTGGCTGGAATTGGTGGCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590258.2
CDS-3UTR TCA 90 bp GCTTCACACTCCATGTCATGTGGAAGCCATTGGTCATCAGGTAAAAGTTCTTCAGTAGTTCTCGGCGCCTaGAAGCGCGGCGCAGTGATG +
Preference number: 4 (lower is better)
Translates to: ASHSMSCGSHWSSGKSSSVVLGA*KRGAVM
Trigger: CATCACTGCGCCGCGCTTTCAGGCGCCGAGAACTAC...TGAAGAACTTTTACCTGATGACCAATGGCTTCCACATGACATGGAGTGTGAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585635.5
ENST00000587207.1
CDS-3UTR TCA 90 bp GGTCATTCAACTAGAAAGAGGCCTACGGTCCACACGCAAAACTGGAGGTCACCCGAAGACTGGGTGAGCTaGGTCAGTTTTGAGATGCTG +
Preference number: 4 (lower is better)
Translates to: GHSTRKRPTVHTQNWRSPEDWVS*VSFEML
Trigger: CAGCATCTCAAAACTGACTCAGCTCACCCAGTCTTC...GGGTGACCTCCAGTTTTGCGTGTGGACCGTAGGCCTCTTTCTAGTTGAATGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334295.9
CDS-3UTR TCA 90 bp GGTCATTCAACTAGAAAGAGGCCTACGGTCCACACGCAAAACTGGAGGTCACCCAGTCGGTCTCTTCTGTaGGCAGGTTTGTGTTGTAGG +
Preference number: 4 (lower is better)
Translates to: GHSTRKRPTVHTQNWRSPSRSLL*AGLCCR
Trigger: CCTACAACACAAACCTGCTCACAGAAGAGACCGACT...GGGTGACCTCCAGTTTTGCGTGTGGACCGTAGGCCTCTTTCTAGTTGAATGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334295.9
ENST00000383056.7
ENST00000593035.5
CDS-3UTR TCA 90 bp TGGAGTCCCCTTGGCCAGCAGAGAGTCTGTTCACTTGGTTGGAGAGTTTTATTTGGGGCTTCATGCTGCTaGCTCTTTGCTTGTGGCCAG +
Preference number: 4 (lower is better)
Translates to: WSPLGQQRVCSLGWRVLFGASCC*LFACGQ
Trigger: CTGGCCACAAGCAAAGAGTCAGCAGCATGAAGCCCC...AAATAAAACTCTCCAACCAAGTGAACAGACTCTCTGCTGGCCAAGGGGACTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000590842.5
ENST00000591906.5
ENST00000610723.4
CDS-3UTR TCA 90 bp GGTTCTCTGGAGTCCCCTTGGCCAGCAGAGAGTCTGTTCACTTGGTTGGAGAGTGCCATAACTGAGGAATaGTTGCGACACTGTTGTTCC +
Preference number: 4 (lower is better)
Translates to: GSLESPWPAESLFTWLESAITEE*LRHCCS
Trigger: GGAACAACAGTGTCGCAATCATTCCTCAGTTATGGC...ACTCTCCAACCAAGTGAACAGACTCTCTGCTGGCCAAGGGGACTCCAGAGAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000590842.5
ENST00000591906.5
ENST00000610723.4
CDS-3UTR TCA 90 bp GTTCTCTGGAGTCCCCTTGGCCAGCAGAGAGTCTGTTCACTTGGTTGGAGAGTTATGATGAGGTGTGTCTaGCCTCCCATCCTGTTATGG +
Preference number: 4 (lower is better)
Translates to: VLWSPLGQQRVCSLGWRVMMRCV*PPILLW
Trigger: CCATAACAGGATGGGAGGTCAGACACACCTCATCAT...AACTCTCCAACCAAGTGAACAGACTCTCTGCTGGCCAAGGGGACTCCAGAGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000590842.5
ENST00000591906.5
ENST00000610723.4
CDS-3UTR GCA 90 bp CAGGTAAAAGTTCTTCACATCTTCAGGCATCACACAGTTATTCTTTTGTTCCCATCTCCAGGTGCGGCTTaGTGCAGCCCAGCCCCGGGG +
Preference number: 4 (lower is better)
Translates to: QVKVLHIFRHHTVILLFPSPGAA*CSPAPG
Trigger: CCCCGGGGCTGGGCTGCAGCAAGCCGCACCTGGAGA...TGGGAACAAAAGAATAACTGTGTGATGCCTGAAGATGTGAAGAACTTTTACCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000585635.5
ENST00000590692.5
ENST00000591823.5
CDS-3UTR GCA 90 bp ACTGCCAACCCAGAACAAGTCATGGGACATAAACTATCCAACAGAATTTCATTATCTCCAGGTGCGGCTTaGTGCAGCCCAGCCCCGGGG +
Preference number: 4 (lower is better)
Translates to: TANPEQVMGHKLSNRISLSPGAA*CSPAPG
Trigger: CCCCGGGGCTGGGCTGCAGCAAGCCGCACCTGGAGA...TAATGAAATTCTGTTGGATAGTTTATGTCCCATGACTTGTTCTGGGTTGGCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589049.5
CDS-3UTR GCA 90 bp GTGCTCATCCAGCTTCACACTCCATGTCATGTGGAAGCCATTGGTCATCAGGTAATCGTCCTCCAGGTCTaGCAGAGTGGGTGCATTAGG +
Preference number: 4 (lower is better)
Translates to: VLIQLHTPCHVEAIGHQVIVLQV*QSGCIR
Trigger: CCTAATGCACCCACTCTGGCAGACCTGGAGGACGAT...TACCTGATGACCAATGGCTTCCACATGACATGGAGTGTGAAGCTGGATGAGCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000585635.5
ENST00000590692.5
ENST00000591823.5
CDS-3UTR GCA 90 bp TGGGAACAGGACCTTAAACAGTTCCACAGGCTCGCCTCTTCAGAATGGCAAAACATCGTCCTCCAGGTCTaGCAGAGTGGGTGCATTAGG +
Preference number: 4 (lower is better)
Translates to: WEQDLKQFHRLASSEWQNIVLQV*QSGCIR
Trigger: CCTAATGCACCCACTCTGGCAGACCTGGAGGACGAT...GTTTTGCCATTCTGAAGAGGCGAGCCTGTGGAACTGTTTAAGGTCCTGTTCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614939.4
CDS-3UTR GCA 90 bp AAATTCCCCATTGCTTCCAGAGGCAGGGGACAGCACAACCTGCTCTGGAGGCCTGTGTCTGTGAGAAAATaGCAGTATAACGCTCTGTCC +
Preference number: 4 (lower is better)
Translates to: KFPIASRGRGQHNLLWRPVSVRK*QYNALS
Trigger: GGACAGAGCGTTATACTGGCATTTTCTCACAGACAC...AGGCCTCCAGAGCAGGTTGTGCTGTCCCCTGCCTCTGGAAGCAATGGGGAATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000334295.9
ENST00000383056.7
ENST00000593035.5
CDS-3UTR GCA 90 bp AATGCAGTTCTAATGCTTCATGGGTCAAAACCAGTGGTTTCTTTGGGGGACCTCCTGGTGAAGGCATATTaGCACTGGGGCAGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: NAVLMLHGSKPVVSLGDLLVKAY*HWGRPR
Trigger: CCTGGGCCTGCCCCAGTGGCAATATGCCTTCACCAG...GAGGTCCCCCAAAGAAACCACTGGTTTTGACCCATGAAGCATTAGAACTGCATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000334295.9
ENST00000383056.7
ENST00000593035.5
CDS-3UTR GCA 90 bp TCAACTAGAAAGAGGCCTACGGTCCACACGCAAAACTGGAGGTCACCCCTAGGGTACATGCTGAACCATTaGTTGGCCTGTGGGCTAATG +
Preference number: 4 (lower is better)
Translates to: STRKRPTVHTQNWRSPLGYMLNH*LACGLM
Trigger: CATTAGCCCACAGGCCAAGCAATGGTTCAGCATGTA...CCCTAGGGGTGACCTCCAGTTTTGCGTGTGGACCGTAGGCCTCTTTCTAGTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334295.9
ENST00000383056.7
ENST00000593035.5
CDS-3UTR GCA 90 bp TGCTTCATGGGTCAAAACCAGTGGTTTCTTTGGGGGACCTCTCTAATCAATCAGGGGGACAGCACAACCTaGTCTGGAGGCCTCACTACG +
Preference number: 4 (lower is better)
Translates to: CFMGQNQWFLWGTSLINQGDSTT*SGGLTT
Trigger: CGTAGTGAGGCCTCCAGAGCAGGTTGTGCTGTCCCC...CTGATTGATTAGAGAGGTCCCCCAAAGAAACCACTGGTTTTGACCCATGAAGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000334295.9
ENST00000383056.7
ENST00000593035.5
CDS-3UTR GCA 90 bp CCCCTAGGGCCATCTGTGCATGGAAACCACCACTCTGGAGCTGGTAGGGAGTTGGAATTACAGGCAACTTaGTTCCAAAGGAACTCTTGG +
Preference number: 4 (lower is better)
Translates to: PLGPSVHGNHHSGAGRELELQAT*FQRNSW
Trigger: CCAAGAGTTCCTTTGGAAGCAAGTTGCCTGTAATTC...CAACTCCCTACCAGCTCCAGAGTGGTGGTTTCCATGCACAGATGGCCCTAGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334295.9
CDS-3UTR GCA 90 bp CCACCCTGTTCTAAGCAGGAGACTGCTTGTCCTAAGGATGGCCAGGGACCAGGCCTTCAGTACAAAAACTaGAGCCACCCAAAGAACTTG +
Preference number: 4 (lower is better)
Translates to: PPCSKQETACPKDGQGPGLQYKN*SHPKNL
Trigger: CAAGTTCTTTGGGTGGCTGCAGTTTTTGTACTGAAG...GCCTGGTCCCTGGCCATCCTTAGGACAAGCAGTCTCCTGCTTAGAACAGGGTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334295.9
CDS-3UTR GCA 90 bp TGGCCAGCAGAGAGTCTGTTCACTTGGTTGGAGAGTTTTATTTGTAGTTCTCAGTGGATTGGCGCCTGCTaGACACGCTACAGCTCCGGG +
Preference number: 4 (lower is better)
Translates to: WPAESLFTWLESFICSSQWIGAC*TRYSSG
Trigger: CCCGGAGCTGTAGCGTGTGCAGCAGGCGCCAATCCA...CTGAGAACTACAAATAAAACTCTCCAACCAAGTGAACAGACTCTCTGCTGGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000591906.5
ENST00000610723.4
CDS-3UTR GCA 90 bp GTCCCCTGCACATACCTTCTCCATCGTGTCAGCTGTGTTTCTCTTGATTCCGTGCCCCATGGCTTGTGTTaGCTGCTACGCATTGACTTG +
Preference number: 4 (lower is better)
Translates to: VPCTYLLHRVSCVSLDSVPHGLC*LLRIDL
Trigger: CAAGTCAATGCGTAGCAGGCAACACAAGCCATGGGG...CACGGAATCAAGAGAAACACAGCTGACACGATGGAGAAGGTATGTGCAGGGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590258.2
CDS-3UTR GCA 90 bp TGGGAACAGGACCTTAAACAGTTCCACAGGCTCGCCTCTTCAGAATGGCAAAACTCCTGGCAGACAGACTaGAGGGCACTTCAGCAAGAG +
Preference number: 4 (lower is better)
Translates to: WEQDLKQFHRLASSEWQNSWQTD*RALQQE
Trigger: CTCTTGCTGAAGTGCCCTGCAGTCTGTCTGCCAGGA...GTTTTGCCATTCTGAAGAGGCGAGCCTGTGGAACTGTTTAAGGTCCTGTTCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590258.2
CDS-3UTR GCA 90 bp CCCTGGGCTTGGTTGGCACCTCGGAGTTGCAGCTGTGACACTCATAGGTTACTCTGTATTAGTGGAGCTTaGATTTTCCCCTGCTCTGGA +
Preference number: 4 (lower is better)
Translates to: PWAWLAPRSCSCDTHRLLCISGA*IFPCSG
Trigger: TCCAGAGCAGGGGAAAATGCAAGCTCCACTAATACA...GAGTAACCTATGAGTGTCACAGCTGCAACTCCGAGGTGCCAACCAAGCCCAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590258.2
CDS-3UTR GCA 90 bp CTTGAGCATGTCCCCAGCTATTGTTGGTCGTCTGTTGGATTTGTGAGGTTGTTGTGGAACCCCTCGCTGTaGACTGGTTGCCTCACCTCA +
Preference number: 4 (lower is better)
Translates to: LEHVPSYCWSSVGFVRLLWNPSL*TGCLTS
Trigger: TGAGGTGAGGCAACCAGTGCACAGCGAGGGGTTCCA...CAACAACCTCACAAATCCAACAGACGACCAACAATAGCTGGGGACATGCTCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590258.2
CDS-3UTR CCA 90 bp TCACACTCCATGTCATGTGGAAGCCATTGGTCATCAGGTAAAAGTTCTTCACATATGGGGGCCCGGGGTTaGTCTGACAGCAGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: SHSMSCGSHWSSGKSSSHMGARG*SDSSSS
Trigger: GGAGCTGCTGCTGTCAGACCAACCCCGGGCCCCCAT...ATGTGAAGAACTTTTACCTGATGACCAATGGCTTCCACATGACATGGAGTGTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000585635.5
ENST00000587207.1
CDS-3UTR CCA 90 bp AGCCTGGCTAATGTCGGTGGGACTAAAAGCCTTACAATTTTGGTCATTCAACTAATGGGGGCCCGGGGTTaGTCTGACAGCAGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: SLANVGGTKSLTILVIQLMGARG*SDSSSS
Trigger: GGAGCTGCTGCTGTCAGACCAACCCCGGGCCCCCAT...TAGTTGAATGACCAAAATTGTAAGGCTTTTAGTCCCACCGACATTAGCCAGGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000334295.9
ENST00000383056.7
ENST00000593035.5
CDS-3UTR CCA 90 bp CAGCTTCACACTCCATGTCATGTGGAAGCCATTGGTCATCAGGTAAAAGTTCTTATGCCTCCTCCTCCATaGCTCGCGACCGCGATTCGC +
Preference number: 4 (lower is better)
Translates to: QLHTPCHVEAIGHQVKVLMPPPP*LATAIR
Trigger: GCGAATCGCGGTCGCGAGCCATGGAGGAGGAGGCAT...AAGAACTTTTACCTGATGACCAATGGCTTCCACATGACATGGAGTGTGAAGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585635.5
ENST00000587207.1
CDS-3UTR CCA 90 bp GTGGAAGCCATTGGTCATCAGGTAAAAGTTCTTCACATCTTCAGGCATCACACAATGCCTCCTCCTCCATaGCTCGCGACCGCGATTCGC +
Preference number: 4 (lower is better)
Translates to: VEAIGHQVKVLHIFRHHTMPPPP*LATAIR
Trigger: GCGAATCGCGGTCGCGAGCCATGGAGGAGGAGGCAT...TGTGTGATGCCTGAAGATGTGAAGAACTTTTACCTGATGACCAATGGCTTCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585635.5
ENST00000587207.1
CDS-3UTR CCA 90 bp TGCAGGTTCCTGGGCCCCACCCTAGATCTCCTGAATCAGATAGGGAAGTTGGGAACACTCCATGTCATGTaGAAGCCATTGGTCATCAGG +
Preference number: 4 (lower is better)
Translates to: CRFLGPTLDLLNQIGKLGTLHVM*KPLVIR
Trigger: CCTGATGACCAATGGCTTCCACATGACATGGAGTGT...TCCCAACTTCCCTATCTGATTCAGGAGATCTAGGGTGGGGCCCAGGAACCTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589049.5
CDS-3UTR CCA 90 bp TCAACTAGAAAGAGGCCTACGGTCCACACGCAAAACTGGAGGTCACCCCTAGGGACACTCCATGTCATGTaGAAGCCATTGGTCATCAGG +
Preference number: 4 (lower is better)
Translates to: STRKRPTVHTQNWRSPLGTLHVM*KPLVIR
Trigger: CCTGATGACCAATGGCTTCCACATGACATGGAGTGT...CCCTAGGGGTGACCTCCAGTTTTGCGTGTGGACCGTAGGCCTCTTTCTAGTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334295.9
ENST00000383056.7
ENST00000593035.5
CDS-3UTR CCA 90 bp GGTTCTCTGGAGTCCCCTTGGCCAGCAGAGAGTCTGTTCACTTGGTTGGAGAGTACACTCCATGTCATGTaGAAGCCATTGGTCATCAGG +
Preference number: 4 (lower is better)
Translates to: GSLESPWPAESLFTWLESTLHVM*KPLVIR
Trigger: CCTGATGACCAATGGCTTCCACATGACATGGAGTGT...ACTCTCCAACCAAGTGAACAGACTCTCTGCTGGCCAAGGGGACTCCAGAGAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000590842.5
ENST00000591906.5
ENST00000610723.4
CDS-3UTR CCA 90 bp TGCAGGTTCCTGGGCCCCACCCTAGATCTCCTGAATCAGATAGGGAAGTTGGGAAAAGTGAGGCTTCTCTaGCTGATCATCACTGGCTTC +
Preference number: 4 (lower is better)
Translates to: CRFLGPTLDLLNQIGKLGKVRLL*LIITGF
Trigger: GAAGCCAGTGATGATCAGCCAGAGAAGCCTCACTTT...TCCCAACTTCCCTATCTGATTCAGGAGATCTAGGGTGGGGCCCAGGAACCTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589049.5
CDS-3UTR CCA 90 bp TGCTTCATGGGTCAAAACCAGTGGTTTCTTTGGGGGACCTCTCTAATCAATCAGAAGGCATATTGCCACTaGGGCAGGCCCAGGTGGGTG +
Preference number: 4 (lower is better)
Translates to: CFMGQNQWFLWGTSLINQKAYCH*GRPRWV
Trigger: CACCCACCTGGGCCTGCCCCAGTGGCAATATGCCTT...CTGATTGATTAGAGAGGTCCCCCAAAGAAACCACTGGTTTTGACCCATGAAGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000334295.9
ENST00000383056.7
ENST00000593035.5
CDS-3UTR CCA 90 bp GGGGGAGACAGGGAGCTTGTTGAAGCAGACATTTGTCAAATAGTACATGATGGAAAGGCATATTGCCACTaGGGCAGGCCCAGGTGGGTG +
Preference number: 4 (lower is better)
Translates to: GGDRELVEADICQIVHDGKAYCH*GRPRWV
Trigger: CACCCACCTGGGCCTGCCCCAGTGGCAATATGCCTT...TCCATCATGTACTATTTGACAAATGTCTGCTTCAACAAGCTCCCTGTCTCCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000590652.5
CDS-3UTR CCA 90 bp AGTCCCCTTGGCCAGCAGAGAGTCTGTTCACTTGGTTGGAGAGTTTTATTTGTAAAGGCATATTGCCACTaGGGCAGGCCCAGGTGGGTG +
Preference number: 4 (lower is better)
Translates to: SPLGQQRVCSLGWRVLFVKAYCH*GRPRWV
Trigger: CACCCACCTGGGCCTGCCCCAGTGGCAATATGCCTT...TACAAATAAAACTCTCCAACCAAGTGAACAGACTCTCTGCTGGCCAAGGGGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000590842.5
ENST00000591906.5
CDS-3UTR CCA 90 bp TCAACTAGAAAGAGGCCTACGGTCCACACGCAAAACTGGAGGTCACCCCTAGGGGCTAACTCTTCACCTTaGTTTTCCTCAGGGGCTATG +
Preference number: 4 (lower is better)
Translates to: STRKRPTVHTQNWRSPLGANSSP*FSSGAM
Trigger: CATAGCCCCTGAGGAAAACCAAGGTGAAGAGTTAGC...CCCTAGGGGTGACCTCCAGTTTTGCGTGTGGACCGTAGGCCTCTTTCTAGTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 1 transcripts:
ENST00000334295.9
CDS-3UTR CCA 90 bp GTTTCTAAGGTTCTCTGGAGTCCCCTTGGCCAGCAGAGAGTCTGTTCACTTGGTTTGTTCCCATGCTGTTaGATTGGCGCCTGCTGCACA +
Preference number: 4 (lower is better)
Translates to: VSKVLWSPLGQQRVCSLGLFPCC*IGACCT
Trigger: TGTGCAGCAGGCGCCAATCCAACAGCATGGGAACAA...ACCAAGTGAACAGACTCTCTGCTGGCCAAGGGGACTCCAGAGAACCTTAGAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000590842.5
ENST00000591906.5
ENST00000610723.4
CDS-3UTR CCA 90 bp CAGTTCCACAGGCTCGCCTCTTCAGAATGGCAAAACTCTTCTCAGTGTCCTCAGAGAAGCACCCTCGCTTaGAACGGCCTTCAGATCCTT +
Preference number: 4 (lower is better)
Translates to: QFHRLASSEWQNSSQCPQRSTLA*NGLQIL
Trigger: AAGGATCTGAAGGCCGTTCCAAGCGAGGGTGCTTCT...CTGAGGACACTGAGAAGAGTTTTGCCATTCTGAAGAGGCGAGCCTGTGGAACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590652.5
CDS-3UTR CCA 90 bp TGGGAACAGGACCTTAAACAGTTCCACAGGCTCGCCTCTTCAGAATGGCAAAACCCCCTCGCTGTGCACTaGTTGCCTCACCTCATTTGT +
Preference number: 4 (lower is better)
Translates to: WEQDLKQFHRLASSEWQNPLAVH*LPHLIC
Trigger: ACAAATGAGGTGAGGCAACCAGTGCACAGCGAGGGG...GTTTTGCCATTCTGAAGAGGCGAGCCTGTGGAACTGTTTAAGGTCCTGTTCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590258.2
CDS-3UTR CCA 90 bp CTTAAACAGTTCCACAGGCTCGCCTCTTCAGAATGGCAAAACTCTTCTCAGTGTAGTGCCGCGGCGTTCTaGAGCCGGGACTGTATCCTT +
Preference number: 4 (lower is better)
Translates to: LKQFHRLASSEWQNSSQCSAAAF*SRDCIL
Trigger: AAGGATACAGTCCCGGCTCCAGAACGCCGCGGCACT...ACACTGAGAAGAGTTTTGCCATTCTGAAGAGGCGAGCCTGTGGAACTGTTTAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614939.4
CDS-3UTR TCA 90 bp GACCTTAAACAGTTCCACAGGCTCGCCTCTTCAGAATGGCAAAACTCTTCTCAGATTCTAGGATGCGCGTaGTGCCCAGGGTCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: DLKQFHRLASSEWQNSSQILGCA*CPGSAS
Trigger: AGAAGCTGACCCTGGGCATCACGCGCATCCTAGAAT...CTGAGAAGAGTTTTGCCATTCTGAAGAGGCGAGCCTGTGGAACTGTTTAAGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614939.4
CDS-3UTR TCA 90 bp TTGAGTGACACCGCTGACCTCCTGGTTCCTCCGCTGCTTCACTTGTGGAATCCACAGGAAGAAATCATATaGCGTTCAGCAGGAGGCTTT +
Preference number: 4 (lower is better)
Translates to: LSDTADLLVPPLLHLWNPQEEII*RSAGGF
Trigger: AAAGCCTCCTGCTGAACGTCATATGATTTCTTCCTG...TGGATTCCACAAGTGAAGCAGCGGAGGAACCAGGAGGTCAGCGGTGTCACTCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334295.9
CDS-3UTR TCA 90 bp GGTTCTCTGGAGTCCCCTTGGCCAGCAGAGAGTCTGTTCACTTGGTTGGAGAGTCAGGAAGAAATCATATaGCGTTCAGCAGGAGGCTTT +
Preference number: 4 (lower is better)
Translates to: GSLESPWPAESLFTWLESQEEII*RSAGGF
Trigger: AAAGCCTCCTGCTGAACGTCATATGATTTCTTCCTG...ACTCTCCAACCAAGTGAACAGACTCTCTGCTGGCCAAGGGGACTCCAGAGAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590842.5
ENST00000610723.4
CDS-3UTR TCA 90 bp GTTTCTAAGGTTCTCTGGAGTCCCCTTGGCCAGCAGAGAGTCTGTTCACTTGGTGAAGACTGGGTGAGCTaGGTCAGTTTTGAGATGCTG +
Preference number: 4 (lower is better)
Translates to: VSKVLWSPLGQQRVCSLGEDWVS*VSFEML
Trigger: CAGCATCTCAAAACTGACTCAGCTCACCCAGTCTTC...ACCAAGTGAACAGACTCTCTGCTGGCCAAGGGGACTCCAGAGAACCTTAGAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000590842.5
ENST00000591906.5
ENST00000610723.4
CDS-3UTR TCA 90 bp CGTAATAGCAGCTGCCACTGGGGATGCACACTTGGAGAACAGGGGAGTGAGAATACATGGAAGACTGGGTaGGCTGAGTCAGTTTTGAGA +
Preference number: 4 (lower is better)
Translates to: RNSSCHWGCTLGEQGSENTWKTG*AESVLR
Trigger: TCTCAAAACTGACTCAGCTCACCCAGTCTTCCATGT...ATTCTCACTCCCCTGTTCTCCAAGTGTGCATCCCCAGTGGCAGCTGCTATTACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000589049.5
CDS-3UTR TCA 90 bp GTTCTCTGGAGTCCCCTTGGCCAGCAGAGAGTCTGTTCACTTGGTTGGAGAGTTACATGGAAGACTGGGTaGGCTGAGTCAGTTTTGAGA +
Preference number: 4 (lower is better)
Translates to: VLWSPLGQQRVCSLGWRVTWKTG*AESVLR
Trigger: TCTCAAAACTGACTCAGCTCACCCAGTCTTCCATGT...AACTCTCCAACCAAGTGAACAGACTCTCTGCTGGCCAAGGGGACTCCAGAGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000590842.5
ENST00000591906.5
ENST00000610723.4
CDS-3UTR TCA 90 bp TCTGTGCATGGAAACCACCACTCTGGAGCTGGTAGGGAGTTGGAGGGAGGGGTGCAGAACTTTCTGTGGTaGTGGAAATGTTCCATATCT +
Preference number: 4 (lower is better)
Translates to: SVHGNHHSGAGRELEGGVQNFLW*WKCSIS
Trigger: AGATATGGAACATTTCCATCACCACAGAAAGTTCTG...CACCCCTCCCTCCAACTCCCTACCAGCTCCAGAGTGGTGGTTTCCATGCACAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334295.9
ENST00000383056.7
ENST00000593035.5
CDS-3UTR TCA 90 bp TCCCTGCTCACTCCTTCTGAGGCAGGTCTTGAGCCTTTCCTTATCATAACCCCCTGCTGCAGTGGAAGATaGCATAACTTCTCAACTCCC +
Preference number: 4 (lower is better)
Translates to: SLLTPSEAGLEPFLIITPCCSGR*HNFSTP
Trigger: GGGAGTTGAGAAGTTATGTCATCTTCCACTGCAGCA...GGGGGTTATGATAAGGAAAGGCTCAAGACCTGCCTCAGAAGGAGTGAGCAGGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334295.9
CDS-3UTR TCA 90 bp ATCCTGTGGACTGCTCTTAGTTCCCCAGTGGGTTTGGAAGAGGGAAACCCTGGGCCTTTGATAGCCTTTTaGGAACTCCCACTTGATTGC +
Preference number: 4 (lower is better)
Translates to: ILWTALSSPVGLEEGNPGPLIAF*ELPLDC
Trigger: GCAATCAAGTGGGAGTTCTCAAAAGGCTATCAAAGG...CCCAGGGTTTCCCTCTTCCAAACCCACTGGGGAACTAAGAGCAGTCCACAGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334295.9
CDS-3UTR TCA 90 bp GGTTCTCTGGAGTCCCCTTGGCCAGCAGAGAGTCTGTTCACTTGGTTGGAGAGTCATTCTTGCCATAACTaGGGAATGATTGCGACACTG +
Preference number: 4 (lower is better)
Translates to: GSLESPWPAESLFTWLESHSCHN*GMIATL
Trigger: CAGTGTCGCAATCATTCCTCAGTTATGGCAAGAATG...ACTCTCCAACCAAGTGAACAGACTCTCTGCTGGCCAAGGGGACTCCAGAGAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000590842.5
ENST00000591906.5
ENST00000610723.4
CDS-3UTR TCA 90 bp TGGGAACAGGACCTTAAACAGTTCCACAGGCTCGCCTCTTCAGAATGGCAAAACTTGCCTGCTACGCATTaGCTTGGATCTCCAGGAGTC +
Preference number: 4 (lower is better)
Translates to: WEQDLKQFHRLASSEWQNLPATH*LGSPGV
Trigger: GACTCCTGGAGATCCAAGTCAATGCGTAGCAGGCAA...GTTTTGCCATTCTGAAGAGGCGAGCCTGTGGAACTGTTTAAGGTCCTGTTCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590258.2
CDS-3UTR TCA 90 bp CCAATTCCAGCCAGAATAAGTTTGGCAGTTTGCTCCTTAGCCTCCATTCCTCGAATACTGGGTAGATGCTaGGGTCTCTCCTGCCCTCTG +
Preference number: 4 (lower is better)
Translates to: PIPARISLAVCSLASIPRILGRC*GLSCPL
Trigger: CAGAGGGCAGGAGAGACCTCAGCATCTACCCAGTAT...TCGAGGAATGGAGGCTAAGGAGCAAACTGCCAAACTTATTCTGGCTGGAATTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590258.2
CDS-3UTR TCA 90 bp TTGGGTCTTGTGGAACCCCTCGCTGTGCACTGGTTGCCTCACCTCATTTGTATTAAGACTTGTCTTGGGTaGGGCAGCTACCTCCTCATT +
Preference number: 4 (lower is better)
Translates to: LGLVEPLAVHWLPHLICIKTCLG*GSYLLI
Trigger: AATGAGGAGGTAGCTGCCTCACCCAAGACAAGTCTT...AATACAAATGAGGTGAGGCAACCAGTGCACAGCGAGGGGTTCCACAAGACCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590258.2
CDS-3UTR TCA 90 bp GGGTCTTTGACTATCACATGGGGAAAGCTCAGAACCTGCACAGCCCACTCTGCACCTTGGCTTTTCCTATaGGCCATGGCTGCAAAAGTA +
Preference number: 4 (lower is better)
Translates to: GSLTITWGKLRTCTAHSAPWLFL*AMAAKV
Trigger: TACTTTTGCAGCCATGGCTCATAGGAAAAGCCAAGG...TGCAGAGTGGGCTGTGCAGGTTCTGAGCTTTCCCCATGTGATAGTCAAAGACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000587382.5
CDS-3UTR TCA 90 bp TGTGGAAGCCATTGGTCATCAGGTAAAAGTTCTTCACATCTTCAGGCATCACACGTCCTAGGATGCGCGTaGTGCCCAGGGTCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: CGSHWSSGKSSSHLQASHVLGCA*CPGSAS
Trigger: AGAAGCTGACCCTGGGCATCACGCGCATCCTAGGAC...GTGTGATGCCTGAAGATGTGAAGAACTTTTACCTGATGACCAATGGCTTCCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590692.5
ENST00000591823.5
CDS-3UTR GCA 90 bp GGGGAAAGCTCAGAACCTGCACAGCCCACTCTGCAGCTAAAATGGGTAGCAGCAGCTCAAATATCACACTaGGAGAGTCAAAGTGAGGCT +
Preference number: 4 (lower is better)
Translates to: GESSEPAQPTLQLKWVAAAQISH*ESQSEA
Trigger: AGCCTCACTTTGACTCTCGCAGTGTGATATTTGAGC...TGCTGCTACCCATTTTAGCTGCAGAGTGGGCTGTGCAGGTTCTGAGCTTTCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587382.5
CDS-3UTR GCA 90 bp ATGCAGGTTCCTGGGCCCCACCCTAGATCTCCTGAATCAGATAGGGAAGTTGGGGCTCAAATATCACACTaGGAGAGTCAAAGTGAGGCT +
Preference number: 4 (lower is better)
Translates to: MQVPGPHPRSPESDREVGAQISH*ESQSEA
Trigger: AGCCTCACTTTGACTCTCGCAGTGTGATATTTGAGC...CCCAACTTCCCTATCTGATTCAGGAGATCTAGGGTGGGGCCCAGGAACCTGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589049.5
CDS-3UTR GCA 90 bp GATTGCGACACTGTTGTTCCCATGCTGTTGGATTGGCGCCTGCTGCACACGCTAGCTCAAATATCACACTaGGAGAGTCAAAGTGAGGCT +
Preference number: 4 (lower is better)
Translates to: DCDTVVPMLLDWRLLHTLAQISH*ESQSEA
Trigger: AGCCTCACTTTGACTCTCGCAGTGTGATATTTGAGC...TAGCGTGTGCAGCAGGCGCCAATCCAACAGCATGGGAACAACAGTGTCGCAATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591906.5
CDS-3UTR GCA 90 bp TCAACTAGAAAGAGGCCTACGGTCCACACGCAAAACTGGAGGTCACCCCTAGGGGCTCAAATATCACACTaGGAGAGTCAAAGTGAGGCT +
Preference number: 4 (lower is better)
Translates to: STRKRPTVHTQNWRSPLGAQISH*ESQSEA
Trigger: AGCCTCACTTTGACTCTCGCAGTGTGATATTTGAGC...CCCTAGGGGTGACCTCCAGTTTTGCGTGTGGACCGTAGGCCTCTTTCTAGTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000334295.9
ENST00000383056.7
ENST00000593035.5
CDS-3UTR GCA 90 bp ACGGTCCACACGCAAAACTGGAGGTCACCCCTAGGGCCATCTGTGCATGGAAACCTTTCCCACTGCCATTaGATGAATCCAGCTCAAATA +
Preference number: 4 (lower is better)
Translates to: TVHTQNWRSPLGPSVHGNLSHCH*MNPAQI
Trigger: TATTTGAGCTGGATTCATGCAATGGCAGTGGGAAAG...GTTTCCATGCACAGATGGCCCTAGGGGTGACCTCCAGTTTTGCGTGTGGACCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334295.9
ENST00000383056.7
ENST00000593035.5
CDS-3UTR GCA 90 bp CTCTGGCTGATCATCACTGGCTTCATGTGTATCGTCCTCCAGGTCTGCCAGAGTGGCAAACTTTCCCACTaGCATTGCATGAATCCAGCT +
Preference number: 4 (lower is better)
Translates to: LWLIITGFMCIVLQVCQSGKLSH*HCMNPA
Trigger: AGCTGGATTCATGCAATGGCAGTGGGAAAGTTTGCC...ACTCTGGCAGACCTGGAGGACGATACACATGAAGCCAGTGATGATCAGCCAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000585635.5
ENST00000591823.5
CDS-3UTR GCA 90 bp GGTCATTCAACTAGAAAGAGGCCTACGGTCCACACGCAAAACTGGAGGTCACCCGGCAAACTTTCCCACTaGCATTGCATGAATCCAGCT +
Preference number: 4 (lower is better)
Translates to: GHSTRKRPTVHTQNWRSPGKLSH*HCMNPA
Trigger: AGCTGGATTCATGCAATGGCAGTGGGAAAGTTTGCC...GGGTGACCTCCAGTTTTGCGTGTGGACCGTAGGCCTCTTTCTAGTTGAATGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334295.9
ENST00000383056.7
ENST00000593035.5
CDS-3UTR GCA 90 bp CATGATGGATGTGAACACCCCAGGAGAGCCTGGAACTTGCGAGAGTTGGGTCTGGTGTCTGTGAGAAAATaGCAGTATAACGCTCTGTCC +
Preference number: 4 (lower is better)
Translates to: HDGCEHPRRAWNLRELGLVSVRK*QYNALS
Trigger: GGACAGAGCGTTATACTGGCATTTTCTCACAGACAC...CAGACCCAACTCTCGCAAGTTCCAGGCTCTCCTGGGGTGTTCACATCCATCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590652.5
CDS-3UTR GCA 90 bp CAGCTTCACACTCCATGTCATGTGGAAGCCATTGGTCATCAGGTAAAAGTTCTTCTGGTGAAGGCATATTaGCACTGGGGCAGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: QLHTPCHVEAIGHQVKVLLVKAY*HWGRPR
Trigger: CCTGGGCCTGCCCCAGTGGCAATATGCCTTCACCAG...AAGAACTTTTACCTGATGACCAATGGCTTCCACATGACATGGAGTGTGAAGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000585635.5
ENST00000591823.5
CDS-3UTR GCA 90 bp TCCAGTGCCGTTGGCTCTTCCTTTGATCAATTCTGGCAAGAAAAATACTTCTGGCCCTTTCTGGCCACCTaGAGGCTGCACAGGCCCTTT +
Preference number: 4 (lower is better)
Translates to: SSAVGSSFDQFWQEKYFWPFLAT*RLHRPF
Trigger: AAAGGGCCTGTGCAGCCTGCAGGTGGCCAGAAAGGG...CCAGAAGTATTTTTCTTGCCAGAATTGATCAAAGGAAGAGCCAACGGCACTGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334295.9
CDS-3UTR GCA 90 bp GGGACTAAAAGCCTTACAATTTTGGTCATTCAACTAGAAAGAGGCCTACGGTCCAGTTGGAGGGAGGGGTaGTCACTTCCGGGTGGGGTT +
Preference number: 4 (lower is better)
Translates to: GTKSLTILVIQLERGLRSSWREG*SLPGGV
Trigger: AACCCCACCCGGAAGTGAGCACCCCTCCCTCCAACT...GGACCGTAGGCCTCTTTCTAGTTGAATGACCAAAATTGTAAGGCTTTTAGTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000334295.9
ENST00000383056.7
ENST00000593035.5
CDS-3UTR GCA 90 bp GGGACTAAAAGCCTTACAATTTTGGTCATTCAACTAGAAAGAGGCCTACGGTCCGGGGACAGCACAACCTaGTCTGGAGGCCTCACTACG +
Preference number: 4 (lower is better)
Translates to: GTKSLTILVIQLERGLRSGDSTT*SGGLTT
Trigger: CGTAGTGAGGCCTCCAGAGCAGGTTGTGCTGTCCCC...GGACCGTAGGCCTCTTTCTAGTTGAATGACCAAAATTGTAAGGCTTTTAGTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000334295.9
ENST00000383056.7
ENST00000593035.5
CDS-3UTR GCA 90 bp TTGAGTGACACCGCTGACCTCCTGGTTCCTCCGCTGCTTCACTTGTGGAATCCAGTTTCAGAGCAAAAGTaGATGTGGAGAATCCTGTGG +
Preference number: 4 (lower is better)
Translates to: LSDTADLLVPPLLHLWNPVSEQK*MWRILW
Trigger: CCACAGGATTCTCCACATGCACTTTTGCTCTGAAAC...TGGATTCCACAAGTGAAGCAGCGGAGGAACCAGGAGGTCAGCGGTGTCACTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334295.9
CDS-3UTR GCA 90 bp TCTGTGCATGGAAACCACCACTCTGGAGCTGGTAGGGAGTTGGAGGGAGGGGTGTGTTTTCCTGCTGTTTaGACAAAAGCCTCACATCTT +
Preference number: 4 (lower is better)
Translates to: SVHGNHHSGAGRELEGGVCFPAV*TKASHL
Trigger: AAGATGTGAGGCTTTTGTGCAAACAGCAGGAAAACA...CACCCCTCCCTCCAACTCCCTACCAGCTCCAGAGTGGTGGTTTCCATGCACAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000334295.9
CDS-3UTR GCA 90 bp TTCTTCTGGGAACAGGACCTTAAACAGTTCCACAGGCTCGCCTCTTCAGAATGGTTGGCACCTCGGAGTTaGAGCTGTGACACTCATAGG +
Preference number: 4 (lower is better)
Translates to: FFWEQDLKQFHRLASSEWLAPRS*SCDTHR
Trigger: CCTATGAGTGTCACAGCTGCAACTCCGAGGTGCCAA...CCATTCTGAAGAGGCGAGCCTGTGGAACTGTTTAAGGTCCTGTTCCCAGAAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590258.2
CDS-3UTR GCA 90 bp TATTGTTGGTCGTCTGTTGGATTTGTGAGGTTGTTGGGTCTTGTGGAACCCCTCGACTGGAGTCTTGACTaGCCTGTGCCTTGCTGCTCA +
Preference number: 4 (lower is better)
Translates to: YCWSSVGFVRLLGLVEPLDWSLD*PVPCCS
Trigger: TGAGCAGCAAGGCACAGGGCAGTCAAGACTCCAGTC...GAGGGGTTCCACAAGACCCAACAACCTCACAAATCCAACAGACGACCAACAATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590258.2
CDS-3UTR GCA 90 bp TCTCTGAACTTTGATCAACAGCCTGCCCTGGTCATCTCAGGAACTCTGGCTGATATTTGTCCTCACTGCTaGCCCTTGCCCTGGCTTCAT +
Preference number: 4 (lower is better)
Translates to: SLNFDQQPALVISGTLADICPHC*PLPWLH
Trigger: ATGAAGCCAGGGCAAGGGGCAGCAGTGAGGACAAAT...ATCAGCCAGAGTTCCTGAGATGACCAGGGCAGGCTGTTGATCAAAGTTCAGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590258.2
CDS-3UTR CCA 90 bp GGGTCTTTGACTATCACATGGGGAAAGCTCAGAACCTGCACAGCCCACTCTGCAACACTCCATGTCATGTaGAAGCCATTGGTCATCAGG +
Preference number: 4 (lower is better)
Translates to: GSLTITWGKLRTCTAHSATLHVM*KPLVIR
Trigger: CCTGATGACCAATGGCTTCCACATGACATGGAGTGT...TGCAGAGTGGGCTGTGCAGGTTCTGAGCTTTCCCCATGTGATAGTCAAAGACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587382.5
CDS-3UTR CCA 90 bp GGGTCTTTGACTATCACATGGGGAAAGCTCAGAACCTGCACAGCCCACTCTGCACTGGCTGATCATCACTaGCTTCATGTGTATCGTCCT +
Preference number: 4 (lower is better)
Translates to: GSLTITWGKLRTCTAHSALADHH*LHVYRP
Trigger: AGGACGATACACATGAAGCCAGTGATGATCAGCCAG...TGCAGAGTGGGCTGTGCAGGTTCTGAGCTTTCCCCATGTGATAGTCAAAGACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587382.5
CDS-3UTR CCA 90 bp CTCCTGAATCAGATAGGGAAGTTGGGAACCTGCAATGTAACCATTTCCTCAGTAAAGGCATATTGCCACTaGGGCAGGCCCAGGTGGGTG +
Preference number: 4 (lower is better)
Translates to: LLNQIGKLGTCNVTISSVKAYCH*GRPRWV
Trigger: CACCCACCTGGGCCTGCCCCAGTGGCAATATGCCTT...TACTGAGGAAATGGTTACATTGCAGGTTCCCAACTTCCCTATCTGATTCAGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589049.5
CDS-3UTR CCA 90 bp AAATTCCCCATTGCTTCCAGAGGCAGGGGACAGCACAACCTGCTCTGGAGGCCTGCACTCAGACTTATTTaGGCACTTACACAAGATTCC +
Preference number: 4 (lower is better)
Translates to: KFPIASRGRGQHNLLWRPALRLI*ALTQDS
Trigger: GGAATCTTGTGTAAGTGCCCAAATAAGTCTGAGTGC...AGGCCTCCAGAGCAGGTTGTGCTGTCCCCTGCCTCTGGAAGCAATGGGGAATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334295.9
ENST00000383056.7
ENST00000593035.5
CDS-3UTR CCA 90 bp ACGGTCCACACGCAAAACTGGAGGTCACCCCTAGGGCCATCTGTGCATGGAAACAACCAGTGGTTTCTTTaGGGGACCTCTCTAATCAAT +
Preference number: 4 (lower is better)
Translates to: TVHTQNWRSPLGPSVHGNNQWFL*GTSLIN
Trigger: ATTGATTAGAGAGGTCCCCCAAAGAAACCACTGGTT...GTTTCCATGCACAGATGGCCCTAGGGGTGACCTCCAGTTTTGCGTGTGGACCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000334295.9
ENST00000383056.7
ENST00000593035.5
CDS-3UTR CCA 90 bp TTTCTAAGGTTCTCTGGAGTCCCCTTGGCCAGCAGAGAGTCTGTTCACTTGGTTTTGTTCCCATGCTGTTaGATTGGCGCCTGCTGCACA +
Preference number: 4 (lower is better)
Translates to: FLRFSGVPLASRESVHLVLFPCC*IGACCT
Trigger: TGTGCAGCAGGCGCCAATCCAACAGCATGGGAACAA...AACCAAGTGAACAGACTCTCTGCTGGCCAAGGGGACTCCAGAGAACCTTAGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000590842.5
ENST00000591906.5
ENST00000610723.4
CDS-3UTR CCA 90 bp ATGGTCAGAAACTCAGTTTCTAAGGTTCTCTGGAGTCCCCTTGGCCAGCAGAGATTGTTCCCATGCTGTTaGATTGGCGCCTGCTGCACA +
Preference number: 4 (lower is better)
Translates to: MVRNSVSKVLWSPLGQQRLFPCC*IGACCT
Trigger: TGTGCAGCAGGCGCCAATCCAACAGCATGGGAACAA...TCTCTGCTGGCCAAGGGGACTCCAGAGAACCTTAGAAACTGAGTTTCTGACCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000590842.5
ENST00000591906.5
ENST00000610723.4
CDS-3UTR CCA 90 bp TGGCGCCTGCTGCACACGCTACAGCTCCGGGGCTTCATGCTGCTGACTCTTTGCGTCTGTTCACTTGGTTaGAGAGTTTTATTTGTAGTT +
Preference number: 4 (lower is better)
Translates to: WRLLHTLQLRGFMLLTLCVCSLG*RVLFVV
Trigger: AACTACAAATAAAACTCTCCAACCAAGTGAACAGAC...GCAAAGAGTCAGCAGCATGAAGCCCCGGAGCTGTAGCGTGTGCAGCAGGCGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610723.4
CDS-3UTR CCA 90 bp TTCTGGGAACAGGACCTTAAACAGTTCCACAGGCTCGCCTCTTCAGAATGGCAATTTGGGCTTGGCCTGTaGGCTAATGCCATAGCTGGT +
Preference number: 4 (lower is better)
Translates to: FWEQDLKQFHRLASSEWQFGLGL*ANAIAG
Trigger: ACCAGCTATGGCATTAGCCCACAGGCCAAGCCCAAA...TTGCCATTCTGAAGAGGCGAGCCTGTGGAACTGTTTAAGGTCCTGTTCCCAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590258.2
ENST00000614939.4
CDS-3UTR CCA 90 bp TTCTTCTGGGAACAGGACCTTAAACAGTTCCACAGGCTCGCCTCTTCAGAATGGAGAAGCACCCTCGCTTaGAACGGCCTTCAGATCCTT +
Preference number: 4 (lower is better)
Translates to: FFWEQDLKQFHRLASSEWRSTLA*NGLQIL
Trigger: AAGGATCTGAAGGCCGTTCCAAGCGAGGGTGCTTCT...CCATTCTGAAGAGGCGAGCCTGTGGAACTGTTTAAGGTCCTGTTCCCAGAAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000590258.2
ENST00000590652.5
ENST00000614939.4
CDS-3UTR CCA 90 bp GATGGATGTGAACACCCCAGGAGAGCCTGGAACTTGCGAGAGTTGGGTCTGTACCTCGCCTCTTCAGAATaGCAAAACTCTTCTCAGTGT +
Preference number: 4 (lower is better)
Translates to: DGCEHPRRAWNLRELGLYLASSE*QNSSQC
Trigger: ACACTGAGAAGAGTTTTGCCATTCTGAAGAGGCGAG...GTACAGACCCAACTCTCGCAAGTTCCAGGCTCTCCTGGGGTGTTCACATCCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590652.5
CDS-3UTR CCA 90 bp GGGAACAGGACCTTAAACAGTTCCACAGGCTCGCCTCTTCAGAATGGCAAAACTCCCTCCAGGTGGGGTTaGGGAGACTTGATATTCACA +
Preference number: 4 (lower is better)
Translates to: GNRTLNSSTGSPLQNGKTPSRWG*GDLIFT
Trigger: TGTGAATATCAAGTCTCCCCAACCCCACCTGGAGGG...AGTTTTGCCATTCTGAAGAGGCGAGCCTGTGGAACTGTTTAAGGTCCTGTTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590258.2
CDS-3UTR CCA 90 bp TGGGTGAGGCAGCTACCTCCTCATTCACCCTTATCCAGCCTTTATTTTGATGTTACCCTCTGGCTTCTCTaGAAGTCCCTGGGGAGAAGG +
Preference number: 4 (lower is better)
Translates to: WVRQLPPHSPLSSLYFDVTLWLL*KSLGRR
Trigger: CCTTCTCCCCAGGGACTTCCAGAGAAGCCAGAGGGT...AACATCAAAATAAAGGCTGGATAAGGGTGAATGAGGAGGTAGCTGCCTCACCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590258.2
CDS-3UTR CCA 90 bp GACCTTAAACAGTTCCACAGGCTCGCCTCTTCAGAATGGCAAAACTCTTCTCAGGGTTGTTGGGTCTTGTaGAACCCCTCGCTGTGCACT +
Preference number: 4 (lower is better)
Translates to: DLKQFHRLASSEWQNSSQGCWVL*NPSLCT
Trigger: AGTGCACAGCGAGGGGTTCCACAAGACCCAACAACC...CTGAGAAGAGTTTTGCCATTCTGAAGAGGCGAGCCTGTGGAACTGTTTAAGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590258.2
CDS-3UTR CCA 90 bp TCAGGGCCCAAAGGTAGGCTTGGAAATACAGTAGTTGCAGTAACACGATTTGAGTGCTGCCCCTTGCCCTaGCTTCATGCACTTGCTCTG +
Preference number: 4 (lower is better)
Translates to: SGPKGRLGNTVVAVTRFECCPLP*LHALAL
Trigger: CAGAGCAAGTGCATGAAGCCAGGGCAAGGGGCAGCA...CTCAAATCGTGTTACTGCAACTACTGTATTTCCAAGCCTACCTTTGGGCCCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590258.2
CDS-3UTR CCA 90 bp CAGGACCTTAAACAGTTCCACAGGCTCGCCTCTTCAGAATGGCAAAACTCTTCTGCCAAACATTCAGTCTaGAGGCCAAGGGATCAGGGG +
Preference number: 4 (lower is better)
Translates to: QDLKQFHRLASSEWQNSSAKHSV*RPRDQG
Trigger: CCCCTGATCCCTTGGCCTCCAGACTGAATGTTTGGC...AGAAGAGTTTTGCCATTCTGAAGAGGCGAGCCTGTGGAACTGTTTAAGGTCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590258.2
CDS-3UTR CCA 90 bp CCCCACCCTAGATCTCCTGAATCAGATAGGGAAGTTGGGAACCTGCAATGTAACCCTTACCTTGGCCTGTaGGCTAATGCCATAGCTGGT +
Preference number: 4 (lower is better)
Translates to: PHPRSPESDREVGNLQCNPYLGL*ANAIAG
Trigger: ACCAGCTATGGCATTAGCCCACAGGCCAAGGTAAGG...GTTACATTGCAGGTTCCCAACTTCCCTATCTGATTCAGGAGATCTAGGGTGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589049.5
3UTR CAA 72 bp AGCTATTGTTGGTCGTCTGTTGGATTTGTGAGGTTGTaGGGTCTTGTGGAACCCCTCGCTGTGCACTGGTTG +
Preference number: 4 (lower is better)
Translates to: SYCWSSVGFVRL*GLVEPLAVHWL
Trigger: CAACCAGTGCACAGCGAGGGGTTCCACAAGACCCAACAACCTCACAAATCCAACAGACGACCAACAATAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590258.2
CDS-3UTR TCA 90 bp GCATCACACAGTTATTCTTTTGTTCCCAGGAAGAAATCATATGACGTTCAGCAGGTAGTTCTCGGCGCCTaGAAGCGCGGCGCAGTGATG +
Preference number: 4 (lower is better)
Translates to: ASHSYSFVPRKKSYDVQQVVLGA*KRGAVM
Trigger: CATCACTGCGCCGCGCTTTCAGGCGCCGAGAACTAC...CTGCTGAACGTCATATGATTTCTTCCTGGGAACAAAAGAATAACTGTGTGATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585635.5
CDS-3UTR TCA 90 bp TTTCTAAGGTTCTCTGGAGTCCCCTTGGCCAGCAGAGAGTCTGTTCACTTGGTTCAGGAGGCTTTTCTATaGTGGTCACCTCAGTCACAC +
Preference number: 4 (lower is better)
Translates to: FLRFSGVPLASRESVHLVQEAFL*WSPQSH
Trigger: GTGTGACTGAGGTGACCATCATAGAAAAGCCTCCTG...AACCAAGTGAACAGACTCTCTGCTGGCCAAGGGGACTCCAGAGAACCTTAGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000590842.5
ENST00000610723.4
CDS-3UTR TCA 90 bp GGTCATTCAACTAGAAAGAGGCCTACGGTCCACACGCAAAACTGGAGGTCACCCCAGGAAGAAATCATATaGCGTTCAGCAGGAGGCTTT +
Preference number: 4 (lower is better)
Translates to: GHSTRKRPTVHTQNWRSPQEEII*RSAGGF
Trigger: AAAGCCTCCTGCTGAACGTCATATGATTTCTTCCTG...GGGTGACCTCCAGTTTTGCGTGTGGACCGTAGGCCTCTTTCTAGTTGAATGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334295.9
ENST00000383056.7
ENST00000593035.5
CDS-3UTR TCA 90 bp TTCTTCTGGGAACAGGACCTTAAACAGTTCCACAGGCTCGCCTCTTCAGAATGGTGCTTCCCAGTGGAATaGTGTGCTCATCCAGCTTCA +
Preference number: 4 (lower is better)
Translates to: FFWEQDLKQFHRLASSEWCFPVE*CAHPAS
Trigger: TGAAGCTGGATGAGCACATCATTCCACTGGGAAGCA...CCATTCTGAAGAGGCGAGCCTGTGGAACTGTTTAAGGTCCTGTTCCCAGAAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614939.4
CDS-3UTR TCA 90 bp CTGCCACCATGTAAGATGTGCCTTTCGCCTTCTGCCGTGATTGTGAGGCCTCTCGAGCTGAGTCAGTTTTaGGATGCTGTTAATTGCCAT +
Preference number: 4 (lower is better)
Translates to: LPPCKMCLSPSAVIVRPLELSQF*DAVNCH
Trigger: ATGGCAATTAACAGCATCTCAAAACTGACTCAGCTC...GAGAGGCCTCACAATCACGGCAGAAGGCGAAAGGCACATCTTACATGGTGGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587382.5
CDS-3UTR TCA 90 bp TTTCTAAGGTTCTCTGGAGTCCCCTTGGCCAGCAGAGAGTCTGTTCACTTGGTTGAAGACTGGGTGAGCTaGGTCAGTTTTGAGATGCTG +
Preference number: 4 (lower is better)
Translates to: FLRFSGVPLASRESVHLVEDWVS*VSFEML
Trigger: CAGCATCTCAAAACTGACTCAGCTCACCCAGTCTTC...AACCAAGTGAACAGACTCTCTGCTGGCCAAGGGGACTCCAGAGAACCTTAGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000590842.5
ENST00000591906.5
ENST00000610723.4
CDS-3UTR TCA 90 bp GGTCATTCAACTAGAAAGAGGCCTACGGTCCACACGCAAAACTGGAGGTCACCCTCAGTGCTAAGGGATTaGGGGTTGAGTGTTGAAGAA +
Preference number: 4 (lower is better)
Translates to: GHSTRKRPTVHTQNWRSPSVLRD*GLSVEE
Trigger: TTCTTCAACACTCAACCCTCAATCCCTTAGCACTGA...GGGTGACCTCCAGTTTTGCGTGTGGACCGTAGGCCTCTTTCTAGTTGAATGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334295.9
ENST00000383056.7
ENST00000593035.5
CDS-3UTR TCA 90 bp CACACGCAAAACTGGAGGTCACCCCTAGGGCCATCTGTGCATGGAAACCACCACAATCTACCAGCCACATaGATACTCAAAATGTGGCTA +
Preference number: 4 (lower is better)
Translates to: HTQNWRSPLGPSVHGNHHNLPAT*ILKMWL
Trigger: TAGCCACATTTTGAGTATTCATGTGGCTGGTAGATT...GTGGTGGTTTCCATGCACAGATGGCCCTAGGGGTGACCTCCAGTTTTGCGTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000334295.9
ENST00000383056.7
ENST00000593035.5
CDS-3UTR TCA 90 bp AAATTCCCCATTGCTTCCAGAGGCAGGGGACAGCACAACCTGCTCTGGAGGCCTAAGCTGCAAAAGAAATaGGCAGAGCGAGATATTTGT +
Preference number: 4 (lower is better)
Translates to: KFPIASRGRGQHNLLWRPKLQKK*AERDIC
Trigger: ACAAATATCTCGCTCTGCTCATTTCTTTTGCAGCTT...AGGCCTCCAGAGCAGGTTGTGCTGTCCCCTGCCTCTGGAAGCAATGGGGAATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000334295.9
ENST00000383056.7
ENST00000593035.5
CDS-3UTR TCA 90 bp CACACGCAAAACTGGAGGTCACCCCTAGGGCCATCTGTGCATGGAAACCACCACGAAGGCGCTTTCTCATaGATATCTATCACTATTGTC +
Preference number: 4 (lower is better)
Translates to: HTQNWRSPLGPSVHGNHHEGAFS*ISITIV
Trigger: GACAATAGTGATAGATATTCATGAGAAAGCGCCTTC...GTGGTGGTTTCCATGCACAGATGGCCCTAGGGGTGACCTCCAGTTTTGCGTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334295.9
CDS-3UTR TCA 90 bp TCAACTAGAAAGAGGCCTACGGTCCACACGCAAAACTGGAGGTCACCCCTAGGGTGTGGAATCCAGGGCTaGTTTAGAAATGCTGTGATT +
Preference number: 4 (lower is better)
Translates to: STRKRPTVHTQNWRSPLGCGIQG*FRNAVI
Trigger: AATCACAGCATTTCTAAATCAGCCCTGGATTCCACA...CCCTAGGGGTGACCTCCAGTTTTGCGTGTGGACCGTAGGCCTCTTTCTAGTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334295.9
CDS-3UTR TCA 90 bp TATTGTTGGTCGTCTGTTGGATTTGTGAGGTTGTTGGGTCTTGTGGAACCCCTCTTGCTCTGTGGGTCTTaGGCATGTCCCCAGCTATTG +
Preference number: 4 (lower is better)
Translates to: YCWSSVGFVRLLGLVEPLLLCGS*ACPQLL
Trigger: CAATAGCTGGGGACATGCTCAAGACCCACAGAGCAA...GAGGGGTTCCACAAGACCCAACAACCTCACAAATCCAACAGACGACCAACAATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590258.2
CDS-3UTR TCA 90 bp TTGGGTCTTGTGGAACCCCTCGCTGTGCACTGGTTGCCTCACCTCATTTGTATTGGTATTAGTCCCCATTaGTTCTGCCATGGACATAGG +
Preference number: 4 (lower is better)
Translates to: LGLVEPLAVHWLPHLICIGISPH*FCHGHR
Trigger: CCTATGTCCATGGCAGAATCAATGGGGACTAATACC...AATACAAATGAGGTGAGGCAACCAGTGCACAGCGAGGGGTTCCACAAGACCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590258.2
CDS-3UTR TCA 90 bp GTCCCCTGCACATACCTTCTCCATCGTGTCAGCTGTGTTTCTCTTGATTCCGTGTGCAGTAACACGATTTaGGAGAACCCCTCACCACAT +
Preference number: 4 (lower is better)
Translates to: VPCTYLLHRVSCVSLDSVCSNTI*ENPSPH
Trigger: ATGTGGTGAGGGGTTCTCTCAAATCGTGTTACTGCA...CACGGAATCAAGAGAAACACAGCTGACACGATGGAGAAGGTATGTGCAGGGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590258.2
CDS-3UTR TCA 90 bp AGGAAACTCGTAATAGCAGCTGCCACTGGGGATGCACACTTGGAGAACAGGGGAATCTGTCTTGCTTATTaGAAATGCAGGTTCCTGGGC +
Preference number: 4 (lower is better)
Translates to: RKLVIAAATGDAHLENRGICLAY*KCRFLG
Trigger: GCCCAGGAACCTGCATTTTCAATAAGCAAGACAGAT...TCCCCTGTTCTCCAAGTGTGCATCCCCAGTGGCAGCTGCTATTACGAGTTTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589049.5
CDS-3UTR TCA 90 bp GCATCACACAGTTATTCTTTTGTTCCCAGGAAGAAATCATATGACGTTCAGCAGGCCCTAGGATGCGCGTaGTGCCCAGGGTCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: ASHSYSFVPRKKSYDVQQALGCA*CPGSAS
Trigger: AGAAGCTGACCCTGGGCATCACGCGCATCCTAGGGC...CTGCTGAACGTCATATGATTTCTTCCTGGGAACAAAAGAATAACTGTGTGATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585635.5
CDS-3UTR GCA 90 bp AGTCCCCTTGGCCAGCAGAGAGTCTGTTCACTTGGTTGGAGAGTTTTATTTGTAATCGTCCTCCAGGTCTaGCAGAGTGGGTGCATTAGG +
Preference number: 4 (lower is better)
Translates to: SPLGQQRVCSLGWRVLFVIVLQV*QSGCIR
Trigger: CCTAATGCACCCACTCTGGCAGACCTGGAGGACGAT...TACAAATAAAACTCTCCAACCAAGTGAACAGACTCTCTGCTGGCCAAGGGGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000590842.5
ENST00000591906.5
ENST00000610723.4
CDS-3UTR GCA 90 bp AGGGAAACCCTGGGTCGATTAGCAGGTAGACAGTGCAAAGGAAGGAAGTCTGGCGCTCAAATATCACACTaGGAGAGTCAAAGTGAGGCT +
Preference number: 4 (lower is better)
Translates to: RETLGRLAGRQCKGRKSGAQISH*ESQSEA
Trigger: AGCCTCACTTTGACTCTCGCAGTGTGATATTTGAGC...GCCAGACTTCCTTCCTTTGCACTGTCTACCTGCTAATCGACCCAGGGTTTCCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334295.9
CDS-3UTR GCA 90 bp CTGCCACCATGTAAGATGTGCCTTTCGCCTTCTGCCGTGATTGTGAGGCCTCTCCTTTCCCACTGCCATTaGATGAATCCAGCTCAAATA +
Preference number: 4 (lower is better)
Translates to: LPPCKMCLSPSAVIVRPLLSHCH*MNPAQI
Trigger: TATTTGAGCTGGATTCATGCAATGGCAGTGGGAAAG...GAGAGGCCTCACAATCACGGCAGAAGGCGAAAGGCACATCTTACATGGTGGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587382.5
CDS-3UTR GCA 90 bp GTTCCTGGGCCCCACCCTAGATCTCCTGAATCAGATAGGGAAGTTGGGAACCTGCTTTCCCACTGCCATTaGATGAATCCAGCTCAAATA +
Preference number: 4 (lower is better)
Translates to: VPGPHPRSPESDREVGNLLSHCH*MNPAQI
Trigger: TATTTGAGCTGGATTCATGCAATGGCAGTGGGAAAG...CAGGTTCCCAACTTCCCTATCTGATTCAGGAGATCTAGGGTGGGGCCCAGGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589049.5
CDS-3UTR GCA 90 bp ACTCAGTTTCTAAGGTTCTCTGGAGTCCCCTTGGCCAGCAGAGAGTCTGTTCACGGCAAACTTTCCCACTaGCATTGCATGAATCCAGCT +
Preference number: 4 (lower is better)
Translates to: TQFLRFSGVPLASRESVHGKLSH*HCMNPA
Trigger: AGCTGGATTCATGCAATGGCAGTGGGAAAGTTTGCC...GTGAACAGACTCTCTGCTGGCCAAGGGGACTCCAGAGAACCTTAGAAACTGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590842.5
ENST00000591906.5
CDS-3UTR GCA 90 bp TCCCTGCTCACTCCTTCTGAGGCAGGTCTTGAGCCTTTCCTTATCATAACCCCCGTGTCTGTGAGAAAATaGCAGTATAACGCTCTGTCC +
Preference number: 4 (lower is better)
Translates to: SLLTPSEAGLEPFLIITPVSVRK*QYNALS
Trigger: GGACAGAGCGTTATACTGGCATTTTCTCACAGACAC...GGGGGTTATGATAAGGAAAGGCTCAAGACCTGCCTCAGAAGGAGTGAGCAGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334295.9
CDS-3UTR GCA 90 bp CGTAATAGCAGCTGCCACTGGGGATGCACACTTGGAGAACAGGGGAGTGAGAATGTGTCTGTGAGAAAATaGCAGTATAACGCTCTGTCC +
Preference number: 4 (lower is better)
Translates to: RNSSCHWGCTLGEQGSENVSVRK*QYNALS
Trigger: GGACAGAGCGTTATACTGGCATTTTCTCACAGACAC...ATTCTCACTCCCCTGTTCTCCAAGTGTGCATCCCCAGTGGCAGCTGCTATTACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000589049.5
CDS-3UTR GCA 90 bp GCCCAGGTGGGTGATGAGCAGGCGGTAATAGGCAGTAAAGGTGTCTGTGAGAAAGTGTCTGTGAGAAAATaGCAGTATAACGCTCTGTCC +
Preference number: 4 (lower is better)
Translates to: AQVGDEQAVIGSKGVCEKVSVRK*QYNALS
Trigger: GGACAGAGCGTTATACTGGCATTTTCTCACAGACAC...TTTCTCACAGACACCTTTACTGCCTATTACCGCCTGCTCATCACCCACCTGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585635.5
ENST00000591823.5
CDS-3UTR GCA 90 bp CACACACACACACACACACACACACACACACGTTTAAATGACCACACTGAATTACTGGTGAAGGCATATTaGCACTGGGGCAGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: HTHTHTHTHTRLNDHTELLVKAY*HWGRPR
Trigger: CCTGGGCCTGCCCCAGTGGCAATATGCCTTCACCAG...TAATTCAGTGTGGTCATTTAAACGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334295.9
CDS-3UTR GCA 90 bp TCCATGTCATGTGGAAGCCATTGGTCATCAGGTAAAAGTTCTTCACATCTTCAGCTGGTGAAGGCATATTaGCACTGGGGCAGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: SMSCGSHWSSGKSSSHLQLVKAY*HWGRPR
Trigger: CCTGGGCCTGCCCCAGTGGCAATATGCCTTCACCAG...CTGAAGATGTGAAGAACTTTTACCTGATGACCAATGGCTTCCACATGACATGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000585635.5
ENST00000591823.5
CDS-3UTR GCA 90 bp TGGAGTCCCCTTGGCCAGCAGAGAGTCTGTTCACTTGGTTGGAGAGTTTTATTTACACTGTTGTTCCCATaGTGTTGGATTGGCGCCTGC +
Preference number: 4 (lower is better)
Translates to: WSPLGQQRVCSLGWRVLFTLLFP*CWIGAC
Trigger: GCAGGCGCCAATCCAACAGCATGGGAACAACAGTGT...AAATAAAACTCTCCAACCAAGTGAACAGACTCTCTGCTGGCCAAGGGGACTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000590842.5
ENST00000591906.5
ENST00000610723.4
CDS-3UTR CCA 90 bp TCCCACTGCCATTGCATGAATCCAGCTCAAATATCACACTGCGAGAGTCAAAGTCCGAGGCCAATTTCATaGCATGCCGGGAACGGTAGT +
Preference number: 4 (lower is better)
Translates to: SHCHCMNPAQISHCESQSPRPIS*HAGNGS
Trigger: ACTACCGTTCCCGGCATGCCATGAAATTGGCCTCGG...ACTTTGACTCTCGCAGTGTGATATTTGAGCTGGATTCATGCAATGGCAGTGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585635.5
CDS-3UTR CCA 90 bp TTATTCTTCTGGGAACAGGACCTTAAACAGTTCCACAGGCTCGCCTCTTCAGAACCGAGGCCAATTTCATaGCATGCCGGGAACGGTAGT +
Preference number: 4 (lower is better)
Translates to: LFFWEQDLKQFHRLASSEPRPIS*HAGNGS
Trigger: ACTACCGTTCCCGGCATGCCATGAAATTGGCCTCGG...TTCTGAAGAGGCGAGCCTGTGGAACTGTTTAAGGTCCTGTTCCCAGAAGAATAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614939.4
CDS-3UTR CCA 90 bp CAAATATTAAGCATATGTGGGCTAGAGGTTCCCCCATATGTCAATGGGAAAATGATGCCTCCTCCTCCATaGCTCGCGACCGCGATTCGC +
Preference number: 4 (lower is better)
Translates to: QILSICGLEVPPYVNGKMMPPPP*LATAIR
Trigger: GCGAATCGCGGTCGCGAGCCATGGAGGAGGAGGCAT...CATTTTCCCATTGACATATGGGGGAACCTCTAGCCCACATATGCTTAATATTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334295.9
CDS-3UTR CCA 90 bp ACTCAGTTTCTAAGGTTCTCTGGAGTCCCCTTGGCCAGCAGAGAGTCTGTTCACACACTCCATGTCATGTaGAAGCCATTGGTCATCAGG +
Preference number: 4 (lower is better)
Translates to: TQFLRFSGVPLASRESVHTLHVM*KPLVIR
Trigger: CCTGATGACCAATGGCTTCCACATGACATGGAGTGT...GTGAACAGACTCTCTGCTGGCCAAGGGGACTCCAGAGAACCTTAGAAACTGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000590842.5
ENST00000591906.5
ENST00000610723.4
CDS-3UTR CCA 90 bp AGCCTGGCTAATGTCGGTGGGACTAAAAGCCTTACAATTTTGGTCATTCAACTAGTGCTCACTTCCGGGTaGGGTTTCCAGAGCCAGAGG +
Preference number: 4 (lower is better)
Translates to: SLANVGGTKSLTILVIQLVLTSG*GFQSQR
Trigger: CCTCTGGCTCTGGAAACCCCACCCGGAAGTGAGCAC...TAGTTGAATGACCAAAATTGTAAGGCTTTTAGTCCCACCGACATTAGCCAGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334295.9
ENST00000383056.7
ENST00000593035.5
CDS-3UTR CCA 90 bp TTGAGTGACACCGCTGACCTCCTGGTTCCTCCGCTGCTTCACTTGTGGAATCCAGCACTCAGACTTATTTaGGCACTTACACAAGATTCC +
Preference number: 4 (lower is better)
Translates to: LSDTADLLVPPLLHLWNPALRLI*ALTQDS
Trigger: GGAATCTTGTGTAAGTGCCCAAATAAGTCTGAGTGC...TGGATTCCACAAGTGAAGCAGCGGAGGAACCAGGAGGTCAGCGGTGTCACTCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334295.9
CDS-3UTR CCA 90 bp GATTGCGACACTGTTGTTCCCATGCTGTTGGATTGGCGCCTGCTGCACACGCTACCTCCCATCCTGTTATaGTCAGAAACTCAGTTTCTA +
Preference number: 4 (lower is better)
Translates to: DCDTVVPMLLDWRLLHTLPPILL*SETQFL
Trigger: TAGAAACTGAGTTTCTGACCATAACAGGATGGGAGG...TAGCGTGTGCAGCAGGCGCCAATCCAACAGCATGGGAACAACAGTGTCGCAATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000591906.5
ENST00000610723.4
CDS-3UTR CCA 90 bp CTTGAGCATGTCCCCAGCTATTGTTGGTCGTCTGTTGGATTTGTGAGGTTGTTGTGCTACGCATTGACTTaGATCTCCAGGAGTCCCCTG +
Preference number: 4 (lower is better)
Translates to: LEHVPSYCWSSVGFVRLLCYALT*ISRSPL
Trigger: CAGGGGACTCCTGGAGATCCAAGTCAATGCGTAGCA...CAACAACCTCACAAATCCAACAGACGACCAACAATAGCTGGGGACATGCTCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590258.2
CDS-3UTR CCA 90 bp CTTGGAAATACAGTAGTTGCAGTAACACGATTTGAGAGAACCCCTCACCACATACCCAGCGTCACCCCATaGCTTGTGTTGCCTGCTACG +
Preference number: 4 (lower is better)
Translates to: LGNTVVAVTRFERTPHHIPSVTP*LVLPAT
Trigger: CGTAGCAGGCAACACAAGCCATGGGGTGACGCTGGG...TATGTGGTGAGGGGTTCTCTCAAATCGTGTTACTGCAACTACTGTATTTCCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590258.2
CDS-3UTR CCA 90 bp CAGGACCTTAAACAGTTCCACAGGCTCGCCTCTTCAGAATGGCAAAACTCTTCTCCCAAACTTTTGTCCTaGCAGACAGACTGCAGGGCA +
Preference number: 4 (lower is better)
Translates to: QDLKQFHRLASSEWQNSSPKLLS*QTDCRA
Trigger: TGCCCTGCAGTCTGTCTGCCAGGACAAAAGTTTGGG...AGAAGAGTTTTGCCATTCTGAAGAGGCGAGCCTGTGGAACTGTTTAAGGTCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590258.2
CDS-3UTR CCA 90 bp TATTGTTGGTCGTCTGTTGGATTTGTGAGGTTGTTGGGTCTTGTGGAACCCCTCCATGCACTTGCTCTGTaGGTCTTGAGCATGTCCCCA +
Preference number: 4 (lower is better)
Translates to: YCWSSVGFVRLLGLVEPLHALAL*VLSMSP
Trigger: TGGGGACATGCTCAAGACCCACAGAGCAAGTGCATG...GAGGGGTTCCACAAGACCCAACAACCTCACAAATCCAACAGACGACCAACAATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590258.2
CDS-3UTR CCA 90 bp CCAATTCCAGCCAGAATAAGTTTGGCAGTTTGCTCCTTAGCCTCCATTCCTCGAGTAGATGAGGGGAGTTaGCAAAGGAACTGGGGAGAC +
Preference number: 4 (lower is better)
Translates to: PIPARISLAVCSLASIPRVDEGS*QRNWGD
Trigger: GTCTCCCCAGTTCCTTTGCCAACTCCCCTCATCTAC...TCGAGGAATGGAGGCTAAGGAGCAAACTGCCAAACTTATTCTGGCTGGAATTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590258.2
CDS-3UTR CCA 90 bp ACTCAGTTTCTAAGGTTCTCTGGAGTCCCCTTGGCCAGCAGAGAGTCTGTTCACAGTTATCTTGGCCTGTaGGCTAATGCCATAGCTGGT +
Preference number: 4 (lower is better)
Translates to: TQFLRFSGVPLASRESVHSYLGL*ANAIAG
Trigger: ACCAGCTATGGCATTAGCCCACAGGCCAAGATAACT...GTGAACAGACTCTCTGCTGGCCAAGGGGACTCCAGAGAACCTTAGAAACTGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590842.5
CDS-3UTR CCA 90 bp GGGGGAGACAGGGAGCTTGTTGAAGCAGACATTTGTCAAATAGTACATGATGGAGGCCTTCAGATCCTTTaGGGGAGACAGGGAGCTTGT +
Preference number: 4 (lower is better)
Translates to: GGDRELVEADICQIVHDGGLQIL*GRQGAC
Trigger: ACAAGCTCCCTGTCTCCCCCAAAGGATCTGAAGGCC...TCCATCATGTACTATTTGACAAATGTCTGCTTCAACAAGCTCCCTGTCTCCCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590652.5
CDS-3UTR CCA 90 bp CTGCCACCATGTAAGATGTGCCTTTCGCCTTCTGCCGTGATTGTGAGGCCTCTCAGAAACTATGTGATATaGTTTGGCTGTGTCCCTACC +
Preference number: 4 (lower is better)
Translates to: LPPCKMCLSPSAVIVRPLRNYVI*FGCVPT
Trigger: GGTAGGGACACAGCCAAACCATATCACATAGTTTCT...GAGAGGCCTCACAATCACGGCAGAAGGCGAAAGGCACATCTTACATGGTGGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587382.5
3UTR CAA 72 bp TCAGAAACTCAGTTTCTAAGGTTCTCTGGAGTCCCCTaGGCCAGCAGAGAGTCTGTTCACTTGGTTGGAGAG +
Preference number: 4 (lower is better)
Translates to: SETQFLRFSGVP*ASRESVHLVGE
Trigger: CTCTCCAACCAAGTGAACAGACTCTCTGCTGGCCAAGGGGACTCCAGAGAACCTTAGAAACTGAGTTTCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000590842.5
ENST00000591906.5
ENST00000610723.4
3UTR CAA 72 bp TTGTTGGGTCTTGTGGAACCCCTCGCTGTGCACTGGTaGCCTCACCTCATTTGTATTAGTGGAGCTTGCATT +
Preference number: 4 (lower is better)
Translates to: LLGLVEPLAVHW*PHLICISGACI
Trigger: AATGCAAGCTCCACTAATACAAATGAGGTGAGGCAACCAGTGCACAGCGAGGGGTTCCACAAGACCCAACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590258.2
CDS-3UTR TCA 90 bp GCTTCACACTCCATGTCATGTGGAAGCCATTGGTCATCAGGTAAAAGTTCTTCAATTCTAGGATGCGCGTaGTGCCCAGGGTCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: ASHSMSCGSHWSSGKSSSILGCA*CPGSAS
Trigger: AGAAGCTGACCCTGGGCATCACGCGCATCCTAGAAT...TGAAGAACTTTTACCTGATGACCAATGGCTTCCACATGACATGGAGTGTGAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587207.1
CDS-3UTR TCA 90 bp TGGCCAGCAGAGAGTCTGTTCACTTGGTTGGAGAGTTTTATTTGTAGTTCTCAGATTCTAGGATGCGCGTaGTGCCCAGGGTCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: WPAESLFTWLESFICSSQILGCA*CPGSAS
Trigger: AGAAGCTGACCCTGGGCATCACGCGCATCCTAGAAT...CTGAGAACTACAAATAAAACTCTCCAACCAAGTGAACAGACTCTCTGCTGGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610723.4
CDS-3UTR TCA 90 bp GCTCATCCAGCTTCACACTCCATGTCATGTGGAAGCCATTGGTCATCAGGTAAACAGGAGGCTTTTCTATaGTGGTCACCTCAGTCACAC +
Preference number: 4 (lower is better)
Translates to: AHPASHSMSCGSHWSSGKQEAFL*WSPQSH
Trigger: GTGTGACTGAGGTGACCATCATAGAAAAGCCTCCTG...TTTACCTGATGACCAATGGCTTCCACATGACATGGAGTGTGAAGCTGGATGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000585635.5
ENST00000590692.5
ENST00000591823.5
CDS-3UTR TCA 90 bp AGGACCTTAAACAGTTCCACAGGCTCGCCTCTTCAGAATGGCAAAACTCTTCTCCAGGAGGCTTTTCTATaGTGGTCACCTCAGTCACAC +
Preference number: 4 (lower is better)
Translates to: RTLNSSTGSPLQNGKTLLQEAFL*WSPQSH
Trigger: GTGTGACTGAGGTGACCATCATAGAAAAGCCTCCTG...GAGAAGAGTTTTGCCATTCTGAAGAGGCGAGCCTGTGGAACTGTTTAAGGTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614939.4
CDS-3UTR TCA 90 bp GTCAGAAACTCAGTTTCTAAGGTTCTCTGGAGTCCCCTTGGCCAGCAGAGAGTCCAGGAAGAAATCATATaGCGTTCAGCAGGAGGCTTT +
Preference number: 4 (lower is better)
Translates to: VRNSVSKVLWSPLGQQRVQEEII*RSAGGF
Trigger: AAAGCCTCCTGCTGAACGTCATATGATTTCTTCCTG...GACTCTCTGCTGGCCAAGGGGACTCCAGAGAACCTTAGAAACTGAGTTTCTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590842.5
ENST00000610723.4
CDS-3UTR TCA 90 bp GGACTGCTCTTAGTTCCCCAGTGGGTTTGGAAGAGGGAAACCCTGGGTCGATTAGAGCTGAGTCAGTTTTaGGATGCTGTTAATTGCCAT +
Preference number: 4 (lower is better)
Translates to: GLLLVPQWVWKRETLGRLELSQF*DAVNCH
Trigger: ATGGCAATTAACAGCATCTCAAAACTGACTCAGCTC...TAATCGACCCAGGGTTTCCCTCTTCCAAACCCACTGGGGAACTAAGAGCAGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334295.9
CDS-3UTR TCA 90 bp TTCTGGGAACAGGACCTTAAACAGTTCCACAGGCTCGCCTCTTCAGAATGGCAAACATGGAAGACTGGGTaGGCTGAGTCAGTTTTGAGA +
Preference number: 4 (lower is better)
Translates to: FWEQDLKQFHRLASSEWQTWKTG*AESVLR
Trigger: TCTCAAAACTGACTCAGCTCACCCAGTCTTCCATGT...TTGCCATTCTGAAGAGGCGAGCCTGTGGAACTGTTTAAGGTCCTGTTCCCAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614939.4
CDS-3UTR TCA 90 bp CTGGAGTCCCCTTGGCCAGCAGAGAGTCTGTTCACTTGGTTGGAGAGTTTTATTGCCATAACTGAGGAATaGTTGCGACACTGTTGTTCC +
Preference number: 4 (lower is better)
Translates to: LESPWPAESLFTWLESFIAITEE*LRHCCS
Trigger: GGAACAACAGTGTCGCAATCATTCCTCAGTTATGGC...AATAAAACTCTCCAACCAAGTGAACAGACTCTCTGCTGGCCAAGGGGACTCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000590842.5
ENST00000591906.5
ENST00000610723.4
CDS-3UTR TCA 90 bp TGGAGTCCCCTTGGCCAGCAGAGAGTCTGTTCACTTGGTTGGAGAGTTTTATTTATGATGAGGTGTGTCTaGCCTCCCATCCTGTTATGG +
Preference number: 4 (lower is better)
Translates to: WSPLGQQRVCSLGWRVLFMMRCV*PPILLW
Trigger: CCATAACAGGATGGGAGGTCAGACACACCTCATCAT...AAATAAAACTCTCCAACCAAGTGAACAGACTCTCTGCTGGCCAAGGGGACTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000590842.5
ENST00000591906.5
ENST00000610723.4
CDS-3UTR TCA 90 bp TATTGTTGGTCGTCTGTTGGATTTGTGAGGTTGTTGGGTCTTGTGGAACCCCTCCAGCTGTGTTTCTCTTaGTTCCGTGACACCCGGTTT +
Preference number: 4 (lower is better)
Translates to: YCWSSVGFVRLLGLVEPLQLCFS*FRDTRF
Trigger: AAACCGGGTGTCACGGAATCAAGAGAAACACAGCTG...GAGGGGTTCCACAAGACCCAACAACCTCACAAATCCAACAGACGACCAACAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590258.2
CDS-3UTR TCA 90 bp TTCTGGGAACAGGACCTTAAACAGTTCCACAGGCTCGCCTCTTCAGAATGGCAAAGCCACCCTTTCAAATaGAGACTTGTCTTGGGTGAG +
Preference number: 4 (lower is better)
Translates to: FWEQDLKQFHRLASSEWQSHPFK*RLVLGE
Trigger: CTCACCCAAGACAAGTCTTCATTTGAAAGGGTGGCT...TTGCCATTCTGAAGAGGCGAGCCTGTGGAACTGTTTAAGGTCCTGTTCCCAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590258.2
CDS-3UTR GCA 90 bp GCTTCACACTCCATGTCATGTGGAAGCCATTGGTCATCAGGTAAAAGTTCTTCAATCGTCCTCCAGGTCTaGCAGAGTGGGTGCATTAGG +
Preference number: 4 (lower is better)
Translates to: ASHSMSCGSHWSSGKSSSIVLQV*QSGCIR
Trigger: CCTAATGCACCCACTCTGGCAGACCTGGAGGACGAT...TGAAGAACTTTTACCTGATGACCAATGGCTTCCACATGACATGGAGTGTGAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000585635.5
ENST00000590692.5
ENST00000591823.5
CDS-3UTR GCA 90 bp GCCCAGGTGGGTGATGAGCAGGCGGTAATAGGCAGTAAAGGTGTCTGTGAGAAACTTTCCCACTGCCATTaGATGAATCCAGCTCAAATA +
Preference number: 4 (lower is better)
Translates to: AQVGDEQAVIGSKGVCEKLSHCH*MNPAQI
Trigger: TATTTGAGCTGGATTCATGCAATGGCAGTGGGAAAG...TTTCTCACAGACACCTTTACTGCCTATTACCGCCTGCTCATCACCCACCTGGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000585635.5
ENST00000591823.5
CDS-3UTR GCA 90 bp TGGGAACAGGACCTTAAACAGTTCCACAGGCTCGCCTCTTCAGAATGGCAAAACGGCAAACTTTCCCACTaGCATTGCATGAATCCAGCT +
Preference number: 4 (lower is better)
Translates to: WEQDLKQFHRLASSEWQNGKLSH*HCMNPA
Trigger: AGCTGGATTCATGCAATGGCAGTGGGAAAGTTTGCC...GTTTTGCCATTCTGAAGAGGCGAGCCTGTGGAACTGTTTAAGGTCCTGTTCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590652.5
ENST00000614939.4
CDS-3UTR GCA 90 bp TCATGGAAGATGGGGTATCCATCCCCTCAAACATTTATCCTTTGTGTGAGAAATCTGGTGAAGGCATATTaGCACTGGGGCAGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: SWKMGYPSPQTFILCVRNLVKAY*HWGRPR
Trigger: CCTGGGCCTGCCCCAGTGGCAATATGCCTTCACCAG...ATTTCTCACACAAAGGATAAATGTTTGAGGGGATGGATACCCCATCTTCCATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000587382.5
CDS-3UTR GCA 90 bp CTGGCTAATGTCGGTGGGACTAAAAGCCTTACAATTTTGGTCATTCAACTAGAACCCTTTCTGGCCACCTaGAGGCTGCACAGGCCCTTT +
Preference number: 4 (lower is better)
Translates to: LANVGGTKSLTILVIQLEPFLAT*RLHRPF
Trigger: AAAGGGCCTGTGCAGCCTGCAGGTGGCCAGAAAGGG...TTCTAGTTGAATGACCAAAATTGTAAGGCTTTTAGTCCCACCGACATTAGCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334295.9
ENST00000383056.7
ENST00000593035.5
CDS-3UTR GCA 90 bp TCCCTGCTCACTCCTTCTGAGGCAGGTCTTGAGCCTTTCCTTATCATAACCCCCACGAAGCTCAGTTTATaGTCCCAAAGACTCTTAAGC +
Preference number: 4 (lower is better)
Translates to: SLLTPSEAGLEPFLIITPTKLSL*SQRLLS
Trigger: GCTTAAGAGTCTTTGGGAGCATAAACTGAGCTTCGT...GGGGGTTATGATAAGGAAAGGCTCAAGACCTGCCTCAGAAGGAGTGAGCAGGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334295.9
CDS-3UTR GCA 90 bp TATTGTTGGTCGTCTGTTGGATTTGTGAGGTTGTTGGGTCTTGTGGAACCCCTCTCTCCTCTTTATAAGTaGCCGCATCACTCCTCTCGG +
Preference number: 4 (lower is better)
Translates to: YCWSSVGFVRLLGLVEPLSPLYK*PHHSSR
Trigger: CCGAGAGGAGTGATGCGGGCACTTATAAAGAGGAGA...GAGGGGTTCCACAAGACCCAACAACCTCACAAATCCAACAGACGACCAACAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590258.2
CDS-3UTR GCA 90 bp TGCAGGTTCCTGGGCCCCACCCTAGATCTCCTGAATCAGATAGGGAAGTTGGGACATGCATGCTTTATGTaGAATGAGTATCTTGGGAAG +
Preference number: 4 (lower is better)
Translates to: CRFLGPTLDLLNQIGKLGHACFM*NEYLGK
Trigger: CTTCCCAAGATACTCATTGCACATAAAGCATGCATG...TCCCAACTTCCCTATCTGATTCAGGAGATCTAGGGTGGGGCCCAGGAACCTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589049.5
CDS-3UTR CCA 90 bp GGGACTAAAAGCCTTACAATTTTGGTCATTCAACTAGAAAGAGGCCTACGGTCCCCGAGGCCAATTTCATaGCATGCCGGGAACGGTAGT +
Preference number: 4 (lower is better)
Translates to: GTKSLTILVIQLERGLRSPRPIS*HAGNGS
Trigger: ACTACCGTTCCCGGCATGCCATGAAATTGGCCTCGG...GGACCGTAGGCCTCTTTCTAGTTGAATGACCAAAATTGTAAGGCTTTTAGTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000334295.9
ENST00000383056.7
ENST00000593035.5
CDS-3UTR CCA 90 bp GTGGAAGCCATTGGTCATCAGGTAAAAGTTCTTCACATCTTCAGGCATCACACACCGAGGCCAATTTCATaGCATGCCGGGAACGGTAGT +
Preference number: 4 (lower is better)
Translates to: VEAIGHQVKVLHIFRHHTPRPIS*HAGNGS
Trigger: ACTACCGTTCCCGGCATGCCATGAAATTGGCCTCGG...TGTGTGATGCCTGAAGATGTGAAGAACTTTTACCTGATGACCAATGGCTTCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585635.5
ENST00000587207.1
CDS-3UTR CCA 90 bp TGGGAACAGGACCTTAAACAGTTCCACAGGCTCGCCTCTTCAGAATGGCAAAACACACTCCATGTCATGTaGAAGCCATTGGTCATCAGG +
Preference number: 4 (lower is better)
Translates to: WEQDLKQFHRLASSEWQNTLHVM*KPLVIR
Trigger: CCTGATGACCAATGGCTTCCACATGACATGGAGTGT...GTTTTGCCATTCTGAAGAGGCGAGCCTGTGGAACTGTTTAAGGTCCTGTTCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614939.4
CDS-3UTR CCA 90 bp ATGGTCAGAAACTCAGTTTCTAAGGTTCTCTGGAGTCCCCTTGGCCAGCAGAGAAAAGTGAGGCTTCTCTaGCTGATCATCACTGGCTTC +
Preference number: 4 (lower is better)
Translates to: MVRNSVSKVLWSPLGQQRKVRLL*LIITGF
Trigger: GAAGCCAGTGATGATCAGCCAGAGAAGCCTCACTTT...TCTCTGCTGGCCAAGGGGACTCCAGAGAACCTTAGAAACTGAGTTTCTGACCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000590842.5
ENST00000591906.5
CDS-3UTR CCA 90 bp TTTCTAAGGTTCTCTGGAGTCCCCTTGGCCAGCAGAGAGTCTGTTCACTTGGTTAAAGTGAGGCTTCTCTaGCTGATCATCACTGGCTTC +
Preference number: 4 (lower is better)
Translates to: FLRFSGVPLASRESVHLVKVRLL*LIITGF
Trigger: GAAGCCAGTGATGATCAGCCAGAGAAGCCTCACTTT...AACCAAGTGAACAGACTCTCTGCTGGCCAAGGGGACTCCAGAGAACCTTAGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590842.5
ENST00000591906.5
CDS-3UTR CCA 90 bp TTCTGGGAACAGGACCTTAAACAGTTCCACAGGCTCGCCTCTTCAGAATGGCAAAAAGTGAGGCTTCTCTaGCTGATCATCACTGGCTTC +
Preference number: 4 (lower is better)
Translates to: FWEQDLKQFHRLASSEWQKVRLL*LIITGF
Trigger: GAAGCCAGTGATGATCAGCCAGAGAAGCCTCACTTT...TTGCCATTCTGAAGAGGCGAGCCTGTGGAACTGTTTAAGGTCCTGTTCCCAGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000614939.4
CDS-3UTR CCA 90 bp GCATCACACAGTTATTCTTTTGTTCCCAGGAAGAAATCATATGACGTTCAGCAGAAGGCATATTGCCACTaGGGCAGGCCCAGGTGGGTG +
Preference number: 4 (lower is better)
Translates to: ASHSYSFVPRKKSYDVQQKAYCH*GRPRWV
Trigger: CACCCACCTGGGCCTGCCCCAGTGGCAATATGCCTT...CTGCTGAACGTCATATGATTTCTTCCTGGGAACAAAAGAATAACTGTGTGATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585635.5
ENST00000591823.5
CDS-3UTR CCA 90 bp CATCACACAGTTATTCTTTTGTTCCCAGGAAGAAATCATATGACGTTCAGCAGGAAGGCATATTGCCACTaGGGCAGGCCCAGGTGGGTG +
Preference number: 4 (lower is better)
Translates to: HHTVILLFPGRNHMTFSRKAYCH*GRPRWV
Trigger: CACCCACCTGGGCCTGCCCCAGTGGCAATATGCCTT...CCTGCTGAACGTCATATGATTTCTTCCTGGGAACAAAAGAATAACTGTGTGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585635.5
ENST00000591823.5
CDS-3UTR CCA 90 bp AATGAACAATGCAGTTCTAATGCTTCATGGGTCAAAACCAGTGGTTTCTTTGGGGTGCTCACTTCCGGGTaGGGTTTCCAGAGCCAGAGG +
Preference number: 4 (lower is better)
Translates to: NEQCSSNASWVKTSGFFGVLTSG*GFQSQR
Trigger: CCTCTGGCTCTGGAAACCCCACCCGGAAGTGAGCAC...CCCAAAGAAACCACTGGTTTTGACCCATGAAGCATTAGAACTGCATTGTTCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334295.9
ENST00000383056.7
ENST00000593035.5
CDS-3UTR CCA 90 bp AGCCTGGCTAATGTCGGTGGGACTAAAAGCCTTACAATTTTGGTCATTCAACTAGTCCACACGCAAAACTaGAGGTCACCCCTAGGGCCA +
Preference number: 4 (lower is better)
Translates to: SLANVGGTKSLTILVIQLVHTQN*RSPLGP
Trigger: TGGCCCTAGGGGTGACCTCCAGTTTTGCGTGTGGAC...TAGTTGAATGACCAAAATTGTAAGGCTTTTAGTCCCACCGACATTAGCCAGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000334295.9
ENST00000383056.7
ENST00000593035.5
CDS-3UTR CCA 90 bp CACACACACACACACACACACACACACACACGTTTAAATGACCACACTGAATTAGAACTTGGGGCTAGGTaGGTGACTCCCCACTTTCCC +
Preference number: 4 (lower is better)
Translates to: HTHTHTHTHTRLNDHTELELGAR*VTPHFP
Trigger: GGGAAAGTGGGGAGTCACCCACCTAGCCCCAAGTTC...TAATTCAGTGTGGTCATTTAAACGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334295.9
CDS-3UTR CCA 90 bp GGGACTAAAAGCCTTACAATTTTGGTCATTCAACTAGAAAGAGGCCTACGGTCCGTTCCCCAGTGGGTTTaGAAGAGGGAAACCCTGGGT +
Preference number: 4 (lower is better)
Translates to: GTKSLTILVIQLERGLRSVPQWV*KRETLG
Trigger: ACCCAGGGTTTCCCTCTTCCAAACCCACTGGGGAAC...GGACCGTAGGCCTCTTTCTAGTTGAATGACCAAAATTGTAAGGCTTTTAGTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000334295.9
CDS-3UTR CCA 90 bp CTTAAACAGTTCCACAGGCTCGCCTCTTCAGAATGGCAAAACTCTTCTCAGTGTTTTGGGCTTGGCCTGTaGGCTAATGCCATAGCTGGT +
Preference number: 4 (lower is better)
Translates to: LKQFHRLASSEWQNSSQCFGLGL*ANAIAG
Trigger: ACCAGCTATGGCATTAGCCCACAGGCCAAGCCCAAA...ACACTGAGAAGAGTTTTGCCATTCTGAAGAGGCGAGCCTGTGGAACTGTTTAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000590258.2
ENST00000614939.4
CDS-3UTR CCA 90 bp TTAAACAGTTCCACAGGCTCGCCTCTTCAGAATGGCAAAACTCTTCTCAGTGTCAGAAGCACCCTCGCTTaGAACGGCCTTCAGATCCTT +
Preference number: 4 (lower is better)
Translates to: LNSSTGSPLQNGKTLLSVRSTLA*NGLQIL
Trigger: AAGGATCTGAAGGCCGTTCCAAGCGAGGGTGCTTCT...GACACTGAGAAGAGTTTTGCCATTCTGAAGAGGCGAGCCTGTGGAACTGTTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000590258.2
ENST00000590652.5
ENST00000614939.4
CDS-3UTR CCA 90 bp TCAGGGCCCAAAGGTAGGCTTGGAAATACAGTAGTTGCAGTAACACGATTTGAGATCAACAGCCTGCCCTaGTCATCTCAGGAACTCTGG +
Preference number: 4 (lower is better)
Translates to: SGPKGRLGNTVVAVTRFEINSLP*SSQELW
Trigger: CCAGAGTTCCTGAGATGACCAGGGCAGGCTGTTGAT...CTCAAATCGTGTTACTGCAACTACTGTATTTCCAAGCCTACCTTTGGGCCCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590258.2
CDS-3UTR CCA 90 bp TTCTTCTGGGAACAGGACCTTAAACAGTTCCACAGGCTCGCCTCTTCAGAATGGCCAAGTGCTGATTCCTaGAAGAGAAGGAGCCCTTTA +
Preference number: 4 (lower is better)
Translates to: FFWEQDLKQFHRLASSEWPSADS*KRRSPL
Trigger: TAAAGGGCTCCTTCTCTTCCAGGAATCAGCACTTGG...CCATTCTGAAGAGGCGAGCCTGTGGAACTGTTTAAGGTCCTGTTCCCAGAAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590258.2
CDS-3UTR CCA 90 bp CGTAATAGCAGCTGCCACTGGGGATGCACACTTGGAGAACAGGGGAGTGAGAATAGTGAGGCTGTCCATTaGAATCATCTGTCTTGCTTA +
Preference number: 4 (lower is better)
Translates to: RNSSCHWGCTLGEQGSENSEAVH*NHLSCL
Trigger: TAAGCAAGACAGATGATTCCAATGGACAGCCTCACT...ATTCTCACTCCCCTGTTCTCCAAGTGTGCATCCCCAGTGGCAGCTGCTATTACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589049.5
CDS-3UTR CCA 90 bp CCCCACCCTAGATCTCCTGAATCAGATAGGGAAGTTGGGAACCTGCAATGTAACACTTTTCACTCTTCCTaGGTGCATGTACTGCCAACC +
Preference number: 4 (lower is better)
Translates to: PHPRSPESDREVGNLQCNTFHSS*VHVLPT
Trigger: GGTTGGCAGTACATGCACCCAGGAAGAGTGAAAAGT...GTTACATTGCAGGTTCCCAACTTCCCTATCTGATTCAGGAGATCTAGGGTGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589049.5
CDS-3UTR CCA 90 bp CAGGACCTTAAACAGTTCCACAGGCTCGCCTCTTCAGAATGGCAAAACTCTTCTAATCACCTTGGCCTGTaGGCTAATGCCATAGCTGGT +
Preference number: 4 (lower is better)
Translates to: QDLKQFHRLASSEWQNSSNHLGL*ANAIAG
Trigger: ACCAGCTATGGCATTAGCCCACAGGCCAAGGTGATT...AGAAGAGTTTTGCCATTCTGAAGAGGCGAGCCTGTGGAACTGTTTAAGGTCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590652.5
3UTR CAA 72 bp GGCCCCACCCTAGATCTCCTGAATCAGATAGGGAAGTaGGGAACCTGCAATGTAACCATTTCCTCAGTAGAT +
Preference number: 4 (lower is better)
Translates to: GPTLDLLNQIGK*GTCNVTISSVD
Trigger: ATCTACTGAGGAAATGGTTACATTGCAGGTTCCCAACTTCCCTATCTGATTCAGGAGATCTAGGGTGGGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589049.5
CDS-3UTR TCA 90 bp GATGGAAATGTTCCATATCTTTGTGCTAATACAGAATCTACCAGCCACATGAATGTAGTTCTCGGCGCCTaGAAGCGCGGCGCAGTGATG +
Preference number: 4 (lower is better)
Translates to: DGNVPYLCANTESTSHMNVVLGA*KRGAVM
Trigger: CATCACTGCGCCGCGCTTTCAGGCGCCGAGAACTAC...ATTCATGTGGCTGGTAGATTCTGTATTAGCACAAAGATATGGAACATTTCCATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334295.9
ENST00000383056.7
ENST00000593035.5
CDS-3UTR TCA 90 bp AGCCTGGCTAATGTCGGTGGGACTAAAAGCCTTACAATTTTGGTCATTCAACTAATTCTAGGATGCGCGTaGTGCCCAGGGTCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: SLANVGGTKSLTILVIQLILGCA*CPGSAS
Trigger: AGAAGCTGACCCTGGGCATCACGCGCATCCTAGAAT...TAGTTGAATGACCAAAATTGTAAGGCTTTTAGTCCCACCGACATTAGCCAGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334295.9
ENST00000383056.7
ENST00000593035.5
CDS-3UTR TCA 90 bp CCAGCTTCACACTCCATGTCATGTGGAAGCCATTGGTCATCAGGTAAAAGTTCTTGCTTCCCAGTGGAATaGTGTGCTCATCCAGCTTCA +
Preference number: 4 (lower is better)
Translates to: PASHSMSCGSHWSSGKSSCFPVE*CAHPAS
Trigger: TGAAGCTGGATGAGCACATCATTCCACTGGGAAGCA...AGAACTTTTACCTGATGACCAATGGCTTCCACATGACATGGAGTGTGAAGCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000585635.5
ENST00000590692.5
ENST00000591823.5
CDS-3UTR TCA 90 bp ACTCAGTTTCTAAGGTTCTCTGGAGTCCCCTTGGCCAGCAGAGAGTCTGTTCACGAGCTGAGTCAGTTTTaGGATGCTGTTAATTGCCAT +
Preference number: 4 (lower is better)
Translates to: TQFLRFSGVPLASRESVHELSQF*DAVNCH
Trigger: ATGGCAATTAACAGCATCTCAAAACTGACTCAGCTC...GTGAACAGACTCTCTGCTGGCCAAGGGGACTCCAGAGAACCTTAGAAACTGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000590842.5
ENST00000591906.5
ENST00000610723.4
CDS-3UTR TCA 90 bp TCTTCTGGGAACAGGACCTTAAACAGTTCCACAGGCTCGCCTCTTCAGAATGGCGAGCTGAGTCAGTTTTaGGATGCTGTTAATTGCCAT +
Preference number: 4 (lower is better)
Translates to: SSGNRTLNSSTGSPLQNGELSQF*DAVNCH
Trigger: ATGGCAATTAACAGCATCTCAAAACTGACTCAGCTC...GCCATTCTGAAGAGGCGAGCCTGTGGAACTGTTTAAGGTCCTGTTCCCAGAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614939.4
CDS-3UTR TCA 90 bp AATGATGTGCTCATCCAGCTTCACACTCCATGTCATGTGGAAGCCATTGGTCATGAAGACTGGGTGAGCTaGGTCAGTTTTGAGATGCTG +
Preference number: 4 (lower is better)
Translates to: NDVLIQLHTPCHVEAIGHEDWVS*VSFEML
Trigger: CAGCATCTCAAAACTGACTCAGCTCACCCAGTCTTC...ATGACCAATGGCTTCCACATGACATGGAGTGTGAAGCTGGATGAGCACATCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000585635.5
ENST00000590692.5
ENST00000591823.5
CDS-3UTR TCA 90 bp TTATTCTTCTGGGAACAGGACCTTAAACAGTTCCACAGGCTCGCCTCTTCAGAAGAAGACTGGGTGAGCTaGGTCAGTTTTGAGATGCTG +
Preference number: 4 (lower is better)
Translates to: LFFWEQDLKQFHRLASSEEDWVS*VSFEML
Trigger: CAGCATCTCAAAACTGACTCAGCTCACCCAGTCTTC...TTCTGAAGAGGCGAGCCTGTGGAACTGTTTAAGGTCCTGTTCCCAGAAGAATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614939.4
CDS-3UTR TCA 90 bp ATATCACACTGCGAGAGTCAAAGTGAGGCTTCTCTGGCTGATCATCACTGGCTTACATGGAAGACTGGGTaGGCTGAGTCAGTTTTGAGA +
Preference number: 4 (lower is better)
Translates to: ISHCESQSEASLADHHWLTWKTG*AESVLR
Trigger: TCTCAAAACTGACTCAGCTCACCCAGTCTTCCATGT...AAGCCAGTGATGATCAGCCAGAGAAGCCTCACTTTGACTCTCGCAGTGTGATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000585635.5
ENST00000590692.5
ENST00000591823.5
CDS-3UTR TCA 90 bp TGGAGTCCCCTTGGCCAGCAGAGAGTCTGTTCACTTGGTTGGAGAGTTTTATTTACATGGAAGACTGGGTaGGCTGAGTCAGTTTTGAGA +
Preference number: 4 (lower is better)
Translates to: WSPLGQQRVCSLGWRVLFTWKTG*AESVLR
Trigger: TCTCAAAACTGACTCAGCTCACCCAGTCTTCCATGT...AAATAAAACTCTCCAACCAAGTGAACAGACTCTCTGCTGGCCAAGGGGACTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000590842.5
ENST00000591906.5
ENST00000610723.4
CDS-3UTR TCA 90 bp GGTCATTCAACTAGAAAGAGGCCTACGGTCCACACGCAAAACTGGAGGTCACCCCAGAACTTTCTGTGGTaGTGGAAATGTTCCATATCT +
Preference number: 4 (lower is better)
Translates to: GHSTRKRPTVHTQNWRSPQNFLW*WKCSIS
Trigger: AGATATGGAACATTTCCATCACCACAGAAAGTTCTG...GGGTGACCTCCAGTTTTGCGTGTGGACCGTAGGCCTCTTTCTAGTTGAATGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334295.9
ENST00000383056.7
ENST00000593035.5
CDS-3UTR TCA 90 bp GGTCATTCAACTAGAAAGAGGCCTACGGTCCACACGCAAAACTGGAGGTCACCCACAGCCATAACAAGTTaGGAAAGACACTATGGAAGA +
Preference number: 4 (lower is better)
Translates to: GHSTRKRPTVHTQNWRSPTAITS*ERHYGR
Trigger: TCTTCCATAGTGTCTTTCTCAACTTGTTATGGCTGT...GGGTGACCTCCAGTTTTGCGTGTGGACCGTAGGCCTCTTTCTAGTTGAATGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334295.9
CDS-3UTR TCA 90 bp ATGGTCAGAAACTCAGTTTCTAAGGTTCTCTGGAGTCCCCTTGGCCAGCAGAGACATTCTTGCCATAACTaGGGAATGATTGCGACACTG +
Preference number: 4 (lower is better)
Translates to: MVRNSVSKVLWSPLGQQRHSCHN*GMIATL
Trigger: CAGTGTCGCAATCATTCCTCAGTTATGGCAAGAATG...TCTCTGCTGGCCAAGGGGACTCCAGAGAACCTTAGAAACTGAGTTTCTGACCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000590842.5
ENST00000591906.5
ENST00000610723.4
CDS-3UTR TCA 90 bp TTAAACAGTTCCACAGGCTCGCCTCTTCAGAATGGCAAAACTCTTCTCAGTGTCCGTCTGTTGGATTTGTaGGGTTGTTGGGTCTTGTGG +
Preference number: 4 (lower is better)
Translates to: LNSSTGSPLQNGKTLLSVRLLDL*GCWVLW
Trigger: CCACAAGACCCAACAACCTCACAAATCCAACAGACG...GACACTGAGAAGAGTTTTGCCATTCTGAAGAGGCGAGCCTGTGGAACTGTTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590258.2
CDS-3UTR TCA 90 bp CTTGGAAATACAGTAGTTGCAGTAACACGATTTGAGAGAACCCCTCACCACATACCTCTGGGGAGTAGATaGGGGGAGTTGGCAAAGGAA +
Preference number: 4 (lower is better)
Translates to: LGNTVVAVTRFERTPHHIPLGSR*GELAKE
Trigger: TTCCTTTGCCAACTCCCCTCATCTACTCCCCAGAGG...TATGTGGTGAGGGGTTCTCTCAAATCGTGTTACTGCAACTACTGTATTTCCAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000590258.2
CDS-3UTR TCA 90 bp TCCACAGGCTCGCCTCTTCAGAATGGCAAAACTCTTCTCAGTGTCCTCAGAAGCAGACAGGGAGCTTGTTaGAGCAGACATTTGTCAAAT +
Preference number: 4 (lower is better)
Translates to: STGSPLQNGKTLLSVLRSRQGAC*SRHLSN
Trigger: ATTTGACAAATGTCTGCTTCAACAAGCTCCCTGTCT...GCTTCTGAGGACACTGAGAAGAGTTTTGCCATTCTGAAGAGGCGAGCCTGTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590652.5
CDS-3UTR TCA 90 bp GGGGAAAGCTCAGAACCTGCACAGCCCACTCTGCAGCTAAAATGGGTAGCAGCAGACATATGTGATTACTaGATACTTGAAATGTGGCTG +
Preference number: 4 (lower is better)
Translates to: GESSEPAQPTLQLKWVAADICDY*ILEMWL
Trigger: CAGCCACATTTCAAGTATTCAGTAATCACATATGTC...TGCTGCTACCCATTTTAGCTGCAGAGTGGGCTGTGCAGGTTCTGAGCTTTCCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587382.5
CDS-3UTR GCA 90 bp TCCATGTCATGTGGAAGCCATTGGTCATCAGGTAAAAGTTCTTCACATCTTCAGATCGTCCTCCAGGTCTaGCAGAGTGGGTGCATTAGG +
Preference number: 4 (lower is better)
Translates to: SMSCGSHWSSGKSSSHLQIVLQV*QSGCIR
Trigger: CCTAATGCACCCACTCTGGCAGACCTGGAGGACGAT...CTGAAGATGTGAAGAACTTTTACCTGATGACCAATGGCTTCCACATGACATGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000585635.5
ENST00000590692.5
ENST00000591823.5
CDS-3UTR GCA 90 bp GGGAACAGGACCTTAAACAGTTCCACAGGCTCGCCTCTTCAGAATGGCAAAACTGCTCAAATATCACACTaGGAGAGTCAAAGTGAGGCT +
Preference number: 4 (lower is better)
Translates to: GNRTLNSSTGSPLQNGKTAQISH*ESQSEA
Trigger: AGCCTCACTTTGACTCTCGCAGTGTGATATTTGAGC...AGTTTTGCCATTCTGAAGAGGCGAGCCTGTGGAACTGTTTAAGGTCCTGTTCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614939.4
CDS-3UTR GCA 90 bp AGGACCTTAAACAGTTCCACAGGCTCGCCTCTTCAGAATGGCAAAACTCTTCTCGGCAAACTTTCCCACTaGCATTGCATGAATCCAGCT +
Preference number: 4 (lower is better)
Translates to: RTLNSSTGSPLQNGKTLLGKLSH*HCMNPA
Trigger: AGCTGGATTCATGCAATGGCAGTGGGAAAGTTTGCC...GAGAAGAGTTTTGCCATTCTGAAGAGGCGAGCCTGTGGAACTGTTTAAGGTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590652.5
ENST00000614939.4
CDS-3UTR GCA 90 bp TTCTGGGAACAGGACCTTAAACAGTTCCACAGGCTCGCCTCTTCAGAATGGCAAGTGTCTGTGAGAAAATaGCAGTATAACGCTCTGTCC +
Preference number: 4 (lower is better)
Translates to: FWEQDLKQFHRLASSEWQVSVRK*QYNALS
Trigger: GGACAGAGCGTTATACTGGCATTTTCTCACAGACAC...TTGCCATTCTGAAGAGGCGAGCCTGTGGAACTGTTTAAGGTCCTGTTCCCAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000590258.2
ENST00000590652.5
ENST00000614939.4
CDS-3UTR GCA 90 bp TTTCTAAGGTTCTCTGGAGTCCCCTTGGCCAGCAGAGAGTCTGTTCACTTGGTTGTGTCTGTGAGAAAATaGCAGTATAACGCTCTGTCC +
Preference number: 4 (lower is better)
Translates to: FLRFSGVPLASRESVHLVVSVRK*QYNALS
Trigger: GGACAGAGCGTTATACTGGCATTTTCTCACAGACAC...AACCAAGTGAACAGACTCTCTGCTGGCCAAGGGGACTCCAGAGAACCTTAGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000590842.5
ENST00000591906.5
CDS-3UTR GCA 90 bp ACTGCCAACCCAGAACAAGTCATGGGACATAAACTATCCAACAGAATTTCATTACTGGTGAAGGCATATTaGCACTGGGGCAGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: TANPEQVMGHKLSNRISLLVKAY*HWGRPR
Trigger: CCTGGGCCTGCCCCAGTGGCAATATGCCTTCACCAG...TAATGAAATTCTGTTGGATAGTTTATGTCCCATGACTTGTTCTGGGTTGGCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589049.5
CDS-3UTR GCA 90 bp CTTGAGCATGTCCCCAGCTATTGTTGGTCGTCTGTTGGATTTGTGAGGTTGTTGATGGCTTGTGTTGCCTaGTACGCATTGACTTGGATC +
Preference number: 4 (lower is better)
Translates to: LEHVPSYCWSSVGFVRLLMACVA*YALTWI
Trigger: GATCCAAGTCAATGCGTAGCAGGCAACACAAGCCAT...CAACAACCTCACAAATCCAACAGACGACCAACAATAGCTGGGGACATGCTCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590258.2
CDS-3UTR GCA 90 bp TGGGTGAGGCAGCTACCTCCTCATTCACCCTTATCCAGCCTTTATTTTGATGTTGACTGCCCTGTGCCTTaGTGCTCATACTTCCTTTTC +
Preference number: 4 (lower is better)
Translates to: WVRQLPPHSPLSSLYFDVDCPVP*CSYFLF
Trigger: GAAAAGGAAGTATGAGCAGCAAGGCACAGGGCAGTC...AACATCAAAATAAAGGCTGGATAAGGGTGAATGAGGAGGTAGCTGCCTCACCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590258.2
CDS-3UTR CCA 90 bp GAGTCCCCTTGGCCAGCAGAGAGTCTGTTCACTTGGTTGGAGAGTTTTATTTGTCTGGCTGATCATCACTaGCTTCATGTGTATCGTCCT +
Preference number: 4 (lower is better)
Translates to: ESPWPAESLFTWLESFICLADHH*LHVYRP
Trigger: AGGACGATACACATGAAGCCAGTGATGATCAGCCAG...ACAAATAAAACTCTCCAACCAAGTGAACAGACTCTCTGCTGGCCAAGGGGACTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000590842.5
ENST00000591906.5
CDS-3UTR CCA 90 bp GGACTGCTCTTAGTTCCCCAGTGGGTTTGGAAGAGGGAAACCCTGGGTCGATTAAGCAAGAAACTTCACTaGAAACTGATGAGGAAGACA +
Preference number: 4 (lower is better)
Translates to: GLLLVPQWVWKRETLGRLSKKLH*KLMRKT
Trigger: TGTCTTCCTCATCAGTTTCCAGTGAAGTTTCTTGCT...TAATCGACCCAGGGTTTCCCTCTTCCAAACCCACTGGGGAACTAAGAGCAGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334295.9
CDS-3UTR CCA 90 bp TCAACTAGAAAGAGGCCTACGGTCCACACGCAAAACTGGAGGTCACCCCTAGGGGTGACAGTCATGTTATaGTTAAAACACACACACACA +
Preference number: 4 (lower is better)
Translates to: STRKRPTVHTQNWRSPLGVTVML*LKHTHT
Trigger: TGTGTGTGTGTGTTTTAACCATAACATGACTGTCAC...CCCTAGGGGTGACCTCCAGTTTTGCGTGTGGACCGTAGGCCTCTTTCTAGTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000334295.9
CDS-3UTR CCA 90 bp CTGGCTAATGTCGGTGGGACTAAAAGCCTTACAATTTTGGTCATTCAACTAGAAACACCGCTGACCTCCTaGTTCCTCCGCTGCTTCACT +
Preference number: 4 (lower is better)
Translates to: LANVGGTKSLTILVIQLETPLTS*FLRCFT
Trigger: AGTGAAGCAGCGGAGGAACCAGGAGGTCAGCGGTGT...TTCTAGTTGAATGACCAAAATTGTAAGGCTTTTAGTCCCACCGACATTAGCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334295.9
CDS-3UTR CCA 90 bp TTCTCTGGAGTCCCCTTGGCCAGCAGAGAGTCTGTTCACTTGGTTGGAGAGTTTCCTCCCATCCTGTTATaGTCAGAAACTCAGTTTCTA +
Preference number: 4 (lower is better)
Translates to: FSGVPLASRESVHLVGEFPPILL*SETQFL
Trigger: TAGAAACTGAGTTTCTGACCATAACAGGATGGGAGG...AAACTCTCCAACCAAGTGAACAGACTCTCTGCTGGCCAAGGGGACTCCAGAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000590842.5
ENST00000591906.5
ENST00000610723.4
CDS-3UTR CCA 90 bp TTCTTCTGGGAACAGGACCTTAAACAGTTCCACAGGCTCGCCTCTTCAGAATGGCTCGCCTCTTCAGAATaGCAAAACTCTTCTCAGTGT +
Preference number: 4 (lower is better)
Translates to: FFWEQDLKQFHRLASSEWLASSE*QNSSQC
Trigger: ACACTGAGAAGAGTTTTGCCATTCTGAAGAGGCGAG...CCATTCTGAAGAGGCGAGCCTGTGGAACTGTTTAAGGTCCTGTTCCCAGAAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000590258.2
ENST00000590652.5
ENST00000614939.4
CDS-3UTR CCA 90 bp TTCTGGGAACAGGACCTTAAACAGTTCCACAGGCTCGCCTCTTCAGAATGGCAAATACACTCCTCATACTaGGTAGATGCTGAGGTCTCT +
Preference number: 4 (lower is better)
Translates to: FWEQDLKQFHRLASSEWQIHSSY*VDAEVS
Trigger: AGAGACCTCAGCATCTACCCAGTATGAGGAGTGTAT...TTGCCATTCTGAAGAGGCGAGCCTGTGGAACTGTTTAAGGTCCTGTTCCCAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590258.2
CDS-3UTR CCA 90 bp AGGAAACTCGTAATAGCAGCTGCCACTGGGGATGCACACTTGGAGAACAGGGGAACCCAGAACAAGTCATaGGACATAAACTATCCAACA +
Preference number: 4 (lower is better)
Translates to: RKLVIAAATGDAHLENRGTQNKS*DINYPT
Trigger: TGTTGGATAGTTTATGTCCCATGACTTGTTCTGGGT...TCCCCTGTTCTCCAAGTGTGCATCCCCAGTGGCAGCTGCTATTACGAGTTTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589049.5
CDS-3UTR CCA 90 bp AAACTCTCTGTGGTAGCTTACTCCAAAGGTGGGTGCTGTCAATTCCTTCCTTCCAGCTTACTCCAAAGGTaGGTGCTGTCAATTCCTTCC +
Preference number: 4 (lower is better)
Translates to: KLSVVAYSKGGCCQFLPSSLLQR*VLSIPS
Trigger: GGAAGGAATTGACAGCACCCACCTTTGGAGTAAGCT...GGAAGGAAGGAATTGACAGCACCCACCTTTGGAGTAAGCTACCACAGAGAGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585635.5
CDS-3UTR TCA 90 bp TCATGGAAGATGGGGTATCCATCCCCTCAAACATTTATCCTTTGTGTGAGAAATATTCTAGGATGCGCGTaGTGCCCAGGGTCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: SWKMGYPSPQTFILCVRNILGCA*CPGSAS
Trigger: AGAAGCTGACCCTGGGCATCACGCGCATCCTAGAAT...ATTTCTCACACAAAGGATAAATGTTTGAGGGGATGGATACCCCATCTTCCATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587382.5
CDS-3UTR TCA 90 bp GTACTGCCAACCCAGAACAAGTCATGGGACATAAACTATCCAACAGAATTTCATATTCTAGGATGCGCGTaGTGCCCAGGGTCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: VLPTQNKSWDINYPTEFHILGCA*CPGSAS
Trigger: AGAAGCTGACCCTGGGCATCACGCGCATCCTAGAAT...ATGAAATTCTGTTGGATAGTTTATGTCCCATGACTTGTTCTGGGTTGGCAGTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589049.5
CDS-3UTR TCA 90 bp GGAAGCCATTGGTCATCAGGTAAAAGTTCTTCACATCTTCAGGCATCACACAGTTGCTTCCCAGTGGAATaGTGTGCTCATCCAGCTTCA +
Preference number: 4 (lower is better)
Translates to: GSHWSSGKSSSHLQASHSCFPVE*CAHPAS
Trigger: TGAAGCTGGATGAGCACATCATTCCACTGGGAAGCA...ACTGTGTGATGCCTGAAGATGTGAAGAACTTTTACCTGATGACCAATGGCTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000585635.5
ENST00000590692.5
ENST00000591823.5
CDS-3UTR TCA 90 bp ATGTGCTCATCCAGCTTCACACTCCATGTCATGTGGAAGCCATTGGTCATCAGGGAGCTGAGTCAGTTTTaGGATGCTGTTAATTGCCAT +
Preference number: 4 (lower is better)
Translates to: MCSSSFTLHVMWKPLVIRELSQF*DAVNCH
Trigger: ATGGCAATTAACAGCATCTCAAAACTGACTCAGCTC...CCTGATGACCAATGGCTTCCACATGACATGGAGTGTGAAGCTGGATGAGCACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000585635.5
ENST00000590692.5
ENST00000591823.5
CDS-3UTR TCA 90 bp CTGGAGTCCCCTTGGCCAGCAGAGAGTCTGTTCACTTGGTTGGAGAGTTTTATTGAGCTGAGTCAGTTTTaGGATGCTGTTAATTGCCAT +
Preference number: 4 (lower is better)
Translates to: LESPWPAESLFTWLESFIELSQF*DAVNCH
Trigger: ATGGCAATTAACAGCATCTCAAAACTGACTCAGCTC...AATAAAACTCTCCAACCAAGTGAACAGACTCTCTGCTGGCCAAGGGGACTCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000590842.5
ENST00000591906.5
ENST00000610723.4
CDS-3UTR TCA 90 bp CTCCTGAATCAGATAGGGAAGTTGGGAACCTGCAATGTAACCATTTCCTCAGTAGAAGACTGGGTGAGCTaGGTCAGTTTTGAGATGCTG +
Preference number: 4 (lower is better)
Translates to: LLNQIGKLGTCNVTISSVEDWVS*VSFEML
Trigger: CAGCATCTCAAAACTGACTCAGCTCACCCAGTCTTC...TACTGAGGAAATGGTTACATTGCAGGTTCCCAACTTCCCTATCTGATTCAGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589049.5
CDS-3UTR TCA 90 bp GCTTCACACTCCATGTCATGTGGAAGCCATTGGTCATCAGGTAAAAGTTCTTCAGAAGACTGGGTGAGCTaGGTCAGTTTTGAGATGCTG +
Preference number: 4 (lower is better)
Translates to: ASHSMSCGSHWSSGKSSSEDWVS*VSFEML
Trigger: CAGCATCTCAAAACTGACTCAGCTCACCCAGTCTTC...TGAAGAACTTTTACCTGATGACCAATGGCTTCCACATGACATGGAGTGTGAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000585635.5
ENST00000590692.5
ENST00000591823.5
CDS-3UTR TCA 90 bp TGGCCAGCAGAGAGTCTGTTCACTTGGTTGGAGAGTTTTATTTGTAGTTCTCAGGAAGACTGGGTGAGCTaGGTCAGTTTTGAGATGCTG +
Preference number: 4 (lower is better)
Translates to: WPAESLFTWLESFICSSQEDWVS*VSFEML
Trigger: CAGCATCTCAAAACTGACTCAGCTCACCCAGTCTTC...CTGAGAACTACAAATAAAACTCTCCAACCAAGTGAACAGACTCTCTGCTGGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000591906.5
ENST00000610723.4
CDS-3UTR TCA 90 bp GGGACTAAAAGCCTTACAATTTTGGTCATTCAACTAGAAAGAGGCCTACGGTCCAGTCGGTCTCTTCTGTaGGCAGGTTTGTGTTGTAGG +
Preference number: 4 (lower is better)
Translates to: GTKSLTILVIQLERGLRSSRSLL*AGLCCR
Trigger: CCTACAACACAAACCTGCTCACAGAAGAGACCGACT...GGACCGTAGGCCTCTTTCTAGTTGAATGACCAAAATTGTAAGGCTTTTAGTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334295.9
ENST00000383056.7
ENST00000593035.5
CDS-3UTR TCA 90 bp CTTAAACAGTTCCACAGGCTCGCCTCTTCAGAATGGCAAAACTCTTCTCAGTGTGGGGTTGGGGAGACTTaGTATTCACATCCAACAGTT +
Preference number: 4 (lower is better)
Translates to: LKQFHRLASSEWQNSSQCGVGET*YSHPTV
Trigger: AACTGTTGGATGTGAATATCAAGTCTCCCCAACCCC...ACACTGAGAAGAGTTTTGCCATTCTGAAGAGGCGAGCCTGTGGAACTGTTTAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000590258.2
CDS-3UTR TCA 90 bp CTGAGTCTCCACAACACCAAAATATCCAGATGTAAACCCCAAACTTGTACACAAGGAAGGTACAGAGTGTaGACCCTCTGGCTTCTCTGG +
Preference number: 4 (lower is better)
Translates to: LSLHNTKISRCKPQTCTQGRYRV*TLWLLW
Trigger: CCAGAGAAGCCAGAGGGTTCACACTCTGTACCTTCC...TTGTGTACAAGTTTGGGGTTTACATCTGGATATTTTGGTGTTGTGGAGACTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590258.2
CDS-3UTR TCA 90 bp TGGGAACAGGACCTTAAACAGTTCCACAGGCTCGCCTCTTCAGAATGGCAAAACTTTAGGGATTTAGGGTaGAGGCAGATCCATAACGTT +
Preference number: 4 (lower is better)
Translates to: WEQDLKQFHRLASSEWQNFRDLG*RQIHNV
Trigger: AACGTTATGGATCTGCCTTCACCCTAAATCCCTAAA...GTTTTGCCATTCTGAAGAGGCGAGCCTGTGGAACTGTTTAAGGTCCTGTTCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590258.2
CDS-3UTR TCA 90 bp CTTGAGCATGTCCCCAGCTATTGTTGGTCGTCTGTTGGATTTGTGAGGTTGTTGCTTTTGTCCACAGGCTaGGTGAGCTTATATTTAGGG +
Preference number: 4 (lower is better)
Translates to: LEHVPSYCWSSVGFVRLLLLSTG*VSLYLG
Trigger: CCCTAAATATAAGCTCACTCAGCCTGTGGACAAAAG...CAACAACCTCACAAATCCAACAGACGACCAACAATAGCTGGGGACATGCTCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590258.2
CDS-3UTR TCA 90 bp TCTTCTGGGAACAGGACCTTAAACAGTTCCACAGGCTCGCCTCTTCAGAATGGCAACATTTTGTCTTGTTaGGCCAAACATTCAGTCTGG +
Preference number: 4 (lower is better)
Translates to: SSGNRTLNSSTGSPLQNGNILSC*AKHSVW
Trigger: CCAGACTGAATGTTTGGCTCAACAAGACAAAATGTT...GCCATTCTGAAGAGGCGAGCCTGTGGAACTGTTTAAGGTCCTGTTCCCAGAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590258.2
CDS-3UTR TCA 90 bp ACTCAGTTTCTAAGGTTCTCTGGAGTCCCCTTGGCCAGCAGAGAGTCTGTTCACACAGCCAGTTTCCAGTaGACACATTTTCTTCTATTC +
Preference number: 4 (lower is better)
Translates to: TQFLRFSGVPLASRESVHTASFQ*THFLLF
Trigger: GAATAGAAGAAAATGTGTTCACTGGAAACTGGCTGT...GTGAACAGACTCTCTGCTGGCCAAGGGGACTCCAGAGAACCTTAGAAACTGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000590842.5
ENST00000610723.4
CDS-3UTR TCA 90 bp GCTTCCCAGTGGAATGATGTGCTCATCCAGCTTCACACTCCATGTCATGTGGAACTTCTCATTGAGAGGTaGGTCTATTTCTCCAACTTC +
Preference number: 4 (lower is better)
Translates to: ASQWNDVLIQLHTPCHVELLIER*VYFSNF
Trigger: GAAGTTGGAGAAATAGACTCACCTCTCAATGAGAAG...TTCCACATGACATGGAGTGTGAAGCTGGATGAGCACATCATTCCACTGGGAAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585635.5
CDS-3UTR GCA 90 bp AAATCATGGAAGATGGGGTATCCATCCCCTCAAACATTTATCCTTTGTGTGAGAATCGTCCTCCAGGTCTaGCAGAGTGGGTGCATTAGG +
Preference number: 4 (lower is better)
Translates to: KSWKMGYPSPQTFILCVRIVLQV*QSGCIR
Trigger: CCTAATGCACCCACTCTGGCAGACCTGGAGGACGAT...TCTCACACAAAGGATAAATGTTTGAGGGGATGGATACCCCATCTTCCATGATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587382.5
CDS-3UTR GCA 90 bp CATGTACTGCCAACCCAGAACAAGTCATGGGACATAAACTATCCAACAGAATTTATCGTCCTCCAGGTCTaGCAGAGTGGGTGCATTAGG +
Preference number: 4 (lower is better)
Translates to: HVLPTQNKSWDINYPTEFIVLQV*QSGCIR
Trigger: CCTAATGCACCCACTCTGGCAGACCTGGAGGACGAT...AAATTCTGTTGGATAGTTTATGTCCCATGACTTGTTCTGGGTTGGCAGTACATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589049.5
CDS-3UTR GCA 90 bp GTGCTCATCCAGCTTCACACTCCATGTCATGTGGAAGCCATTGGTCATCAGGTACTTTCCCACTGCCATTaGATGAATCCAGCTCAAATA +
Preference number: 4 (lower is better)
Translates to: VLIQLHTPCHVEAIGHQVLSHCH*MNPAQI
Trigger: TATTTGAGCTGGATTCATGCAATGGCAGTGGGAAAG...TACCTGATGACCAATGGCTTCCACATGACATGGAGTGTGAAGCTGGATGAGCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000585635.5
ENST00000590692.5
ENST00000591823.5
CDS-3UTR GCA 90 bp AATGATGTGCTCATCCAGCTTCACACTCCATGTCATGTGGAAGCCATTGGTCATGGCAAACTTTCCCACTaGCATTGCATGAATCCAGCT +
Preference number: 4 (lower is better)
Translates to: NDVLIQLHTPCHVEAIGHGKLSH*HCMNPA
Trigger: AGCTGGATTCATGCAATGGCAGTGGGAAAGTTTGCC...ATGACCAATGGCTTCCACATGACATGGAGTGTGAAGCTGGATGAGCACATCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000585635.5
ENST00000591823.5
CDS-3UTR GCA 90 bp TGGAGTCCCCTTGGCCAGCAGAGAGTCTGTTCACTTGGTTGGAGAGTTTTATTTGTGTCTGTGAGAAAATaGCAGTATAACGCTCTGTCC +
Preference number: 4 (lower is better)
Translates to: WSPLGQQRVCSLGWRVLFVSVRK*QYNALS
Trigger: GGACAGAGCGTTATACTGGCATTTTCTCACAGACAC...AAATAAAACTCTCCAACCAAGTGAACAGACTCTCTGCTGGCCAAGGGGACTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000590842.5
ENST00000591906.5
CDS-3UTR GCA 90 bp CAGGACCTTAAACAGTTCCACAGGCTCGCCTCTTCAGAATGGCAAAACTCTTCTGTGTCTGTGAGAAAATaGCAGTATAACGCTCTGTCC +
Preference number: 4 (lower is better)
Translates to: QDLKQFHRLASSEWQNSSVSVRK*QYNALS
Trigger: GGACAGAGCGTTATACTGGCATTTTCTCACAGACAC...AGAAGAGTTTTGCCATTCTGAAGAGGCGAGCCTGTGGAACTGTTTAAGGTCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000590258.2
ENST00000590652.5
ENST00000614939.4
CDS-3UTR GCA 90 bp AATGCAGTTCTAATGCTTCATGGGTCAAAACCAGTGGTTTCTTTGGGGGACCTCTACATGCTGAACCATTaGTTGGCCTGTGGGCTAATG +
Preference number: 4 (lower is better)
Translates to: NAVLMLHGSKPVVSLGDLYMLNH*LACGLM
Trigger: CATTAGCCCACAGGCCAAGCAATGGTTCAGCATGTA...GAGGTCCCCCAAAGAAACCACTGGTTTTGACCCATGAAGCATTAGAACTGCATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000334295.9
ENST00000383056.7
ENST00000593035.5
CDS-3UTR GCA 90 bp TCCAAAGGAACTCTTGGAAGCCCACCCTGTTCTAAGCAGGAGACTGCTTGTCCTAAGGTAATGTTTTCCTaGTGTTTGCACAAAAGCCTC +
Preference number: 4 (lower is better)
Translates to: SKGTLGSPPCSKQETACPKVMFS*CLHKSL
Trigger: GAGGCTTTTGTGCAAACAGCAGGAAAACATTACCTT...AGGACAAGCAGTCTCCTGCTTAGAACAGGGTGGGCTTCCAAGAGTTCCTTTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334295.9
CDS-3UTR GCA 90 bp TTAAACAGTTCCACAGGCTCGCCTCTTCAGAATGGCAAAACTCTTCTCAGTGTCTGCCCTGTGCCTTGCTaGTCATACTTCCTTTTCTTC +
Preference number: 4 (lower is better)
Translates to: LNSSTGSPLQNGKTLLSVCPVPC*SYFLFF
Trigger: GAAGAAAAGGAAGTATGAGCAGCAAGGCACAGGGCA...GACACTGAGAAGAGTTTTGCCATTCTGAAGAGGCGAGCCTGTGGAACTGTTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590258.2
CDS-3UTR GCA 90 bp CAGGACCTTAAACAGTTCCACAGGCTCGCCTCTTCAGAATGGCAAAACTCTTCTTCGCTGTGCACTGGTTaGCTCACCTCATTTGTATTA +
Preference number: 4 (lower is better)
Translates to: QDLKQFHRLASSEWQNSSSLCTG*LTSFVL
Trigger: TAATACAAATGAGGTGAGGCAACCAGTGCACAGCGA...AGAAGAGTTTTGCCATTCTGAAGAGGCGAGCCTGTGGAACTGTTTAAGGTCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590258.2
CDS-3UTR GCA 90 bp GTTCCTGGGCCCCACCCTAGATCTCCTGAATCAGATAGGGAAGTTGGGAACCTGTGGAATCATCTGTCTTaGTTATTGAAAATGCAGGTT +
Preference number: 4 (lower is better)
Translates to: VPGPHPRSPESDREVGNLWNHLS*LLKMQV
Trigger: AACCTGCATTTTCAATAAGCAAGACAGATGATTCCA...CAGGTTCCCAACTTCCCTATCTGATTCAGGAGATCTAGGGTGGGGCCCAGGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589049.5
CDS-3UTR CCA 90 bp TGCTTCATGGGTCAAAACCAGTGGTTTCTTTGGGGGACCTCTCTAATCAATCAGACACTCCATGTCATGTaGAAGCCATTGGTCATCAGG +
Preference number: 4 (lower is better)
Translates to: CFMGQNQWFLWGTSLINQTLHVM*KPLVIR
Trigger: CCTGATGACCAATGGCTTCCACATGACATGGAGTGT...CTGATTGATTAGAGAGGTCCCCCAAAGAAACCACTGGTTTTGACCCATGAAGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000334295.9
ENST00000383056.7
ENST00000593035.5
CDS-3UTR CCA 90 bp CCCCTTGGCCAGCAGAGAGTCTGTTCACTTGGTTGGAGAGTTTTATTTGTAGTTACACTCCATGTCATGTaGAAGCCATTGGTCATCAGG +
Preference number: 4 (lower is better)
Translates to: PLGQQRVCSLGWRVLFVVTLHVM*KPLVIR
Trigger: CCTGATGACCAATGGCTTCCACATGACATGGAGTGT...AACTACAAATAAAACTCTCCAACCAAGTGAACAGACTCTCTGCTGGCCAAGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000590842.5
ENST00000591906.5
ENST00000610723.4
CDS-3UTR CCA 90 bp CTTAAACAGTTCCACAGGCTCGCCTCTTCAGAATGGCAAAACTCTTCTCAGTGTCTGGCTGATCATCACTaGCTTCATGTGTATCGTCCT +
Preference number: 4 (lower is better)
Translates to: LKQFHRLASSEWQNSSQCLADHH*LHVYRP
Trigger: AGGACGATACACATGAAGCCAGTGATGATCAGCCAG...ACACTGAGAAGAGTTTTGCCATTCTGAAGAGGCGAGCCTGTGGAACTGTTTAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614939.4
CDS-3UTR CCA 90 bp GATGGAAATGTTCCATATCTTTGTGCTAATACAGAATCTACCAGCCACATGAATGTGCTCACTTCCGGGTaGGGTTTCCAGAGCCAGAGG +
Preference number: 4 (lower is better)
Translates to: DGNVPYLCANTESTSHMNVLTSG*GFQSQR
Trigger: CCTCTGGCTCTGGAAACCCCACCCGGAAGTGAGCAC...ATTCATGTGGCTGGTAGATTCTGTATTAGCACAAAGATATGGAACATTTCCATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334295.9
ENST00000383056.7
ENST00000593035.5
CDS-3UTR CCA 90 bp CAAATATTAAGCATATGTGGGCTAGAGGTTCCCCCATATGTCAATGGGAAAATGGCCTCACTACGAGCCTaGCTAATGTCGGTGGGACTA +
Preference number: 4 (lower is better)
Translates to: QILSICGLEVPPYVNGKMASLRA*LMSVGL
Trigger: TAGTCCCACCGACATTAGCCAGGCTCGTAGTGAGGC...CATTTTCCCATTGACATATGGGGGAACCTCTAGCCCACATATGCTTAATATTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334295.9
CDS-3UTR CCA 90 bp AATGAACAATGCAGTTCTAATGCTTCATGGGTCAAAACCAGTGGTTTCTTTGGGGGATCCTGCACTGAGTaGAGTCAGTCCTGCTCTTCC +
Preference number: 4 (lower is better)
Translates to: NEQCSSNASWVKTSGFFGGSCTE*SQSCSS
Trigger: GGAAGAGCAGGACTGACTCCACTCAGTGCAGGATCC...CCCAAAGAAACCACTGGTTTTGACCCATGAAGCATTAGAACTGCATTGTTCATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334295.9
CDS-3UTR CCA 90 bp AAGCCAATTCTAAGTCAGTTAAATATGAGCATCCCTCCAGTTGCCAACTGCAACAAGGCAAGCTCTTGCTaGATGAAACCCCTCCAGGTG +
Preference number: 4 (lower is better)
Translates to: KPILSQLNMSIPPVANCNKASSC*MKPLQV
Trigger: CACCTGGAGGGGTTTCATCCAGCAAGAGCTTGCCTT...GTTGCAGTTGGCAACTGGAGGGATGCTCATATTTAACTGACTTAGAATTGGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590258.2
CDS-3UTR CCA 90 bp CTTAAACAGTTCCACAGGCTCGCCTCTTCAGAATGGCAAAACTCTTCTCAGTGTGACCCACAGTACTCATaGAGAGATTTGTCCTCACTG +
Preference number: 4 (lower is better)
Translates to: LKQFHRLASSEWQNSSQCDPQYS*RDLSSL
Trigger: CAGTGAGGACAAATCTCTCCATGAGTACTGTGGGTC...ACACTGAGAAGAGTTTTGCCATTCTGAAGAGGCGAGCCTGTGGAACTGTTTAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590258.2
CDS-3UTR CCA 90 bp CTTGAGCATGTCCCCAGCTATTGTTGGTCGTCTGTTGGATTTGTGAGGTTGTTGAGTGAGAGTGGTCATTaGCCATTCTTGAGTCTTGTG +
Preference number: 4 (lower is better)
Translates to: LEHVPSYCWSSVGFVRLLSESGH*PFLSLV
Trigger: CACAAGACTCAAGAATGGCCAATGACCACTCTCACT...CAACAACCTCACAAATCCAACAGACGACCAACAATAGCTGGGGACATGCTCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590258.2
CDS-3UTR CCA 90 bp TTAAACAGTTCCACAGGCTCGCCTCTTCAGAATGGCAAAACTCTTCTCAGTGTCAGTTGGCAAAGGAACTaGGGAGACATTAAGGTGAGC +
Preference number: 4 (lower is better)
Translates to: LNSSTGSPLQNGKTLLSVSWQRN*GDIKVS
Trigger: GCTCACCTTAATGTCTCCCCAGTTCCTTTGCCAACT...GACACTGAGAAGAGTTTTGCCATTCTGAAGAGGCGAGCCTGTGGAACTGTTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590258.2
CDS-3UTR CCA 90 bp TCTCAGTGTCTTCTGCTAATGCTGGTTTCCCACTTTTGTAGACAAGGCAAACTTCCTTACCTTGGCCTGTaGGCTAATGCCATAGCTGGT +
Preference number: 4 (lower is better)
Translates to: SQCLLLMLVSHFCRQGKLPYLGL*ANAIAG
Trigger: ACCAGCTATGGCATTAGCCCACAGGCCAAGGTAAGG...AAGTTTGCCTTGTCTACAAAAGTGGGAAACCAGCATTAGCAGAAGACACTGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591823.5
CDS-3UTR CCA 90 bp CACACTCCATGTCATGTGGAAGCCATTGGTCATCAGGTAAAAGTTCTTCACATCAGCAATCCTCTGCCCTaGCCTTCCAAAACACTGAGA +
Preference number: 4 (lower is better)
Translates to: HTPCHVEAIGHQVKVLHISNPLP*PSKTLR
Trigger: TCTCAGTGTTTTGGAAGGCCAGGGCAGAGGATTGCT...GATGTGAAGAACTTTTACCTGATGACCAATGGCTTCCACATGACATGGAGTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587207.1
3UTR CAA 72 bp GAGTCCCCTTGGCCAGCAGAGAGTCTGTTCACTTGGTaGGAGAGTTTTATTTGTAGTTCTCAGAAGCAACAC +
Preference number: 4 (lower is better)
Translates to: ESPWPAESLFTW*ESFICSSQKQH
Trigger: GTGTTGCTTCTGAGAACTACAAATAAAACTCTCCAACCAAGTGAACAGACTCTCTGCTGGCCAAGGGGACTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000591906.5
ENST00000610723.4
3UTR CAA 72 bp GAAAGAGGAGCTAGTGCAAGAACAGCTACAGATAGATaGCTTCAGGGCCCAAAGGTAGGCTTGGAAATACAG +
Preference number: 4 (lower is better)
Translates to: ERGASARTATDR*LQGPKVGLEIQ
Trigger: CTGTATTTCCAAGCCTACCTTTGGGCCCTGAAGCAATCTATCTGTAGCTGTTCTTGCACTAGCTCCTCTTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590258.2
CDS-3UTR TCA 90 bp GCTAATGTCGGTGGGACTAAAAGCCTTACAATTTTGGTCATTCAACTAGAAAGAATTCTAGGATGCGCGTaGTGCCCAGGGTCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: ANVGGTKSLTILVIQLERILGCA*CPGSAS
Trigger: AGAAGCTGACCCTGGGCATCACGCGCATCCTAGAAT...TCTTTCTAGTTGAATGACCAAAATTGTAAGGCTTTTAGTCCCACCGACATTAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334295.9
ENST00000383056.7
ENST00000593035.5
CDS-3UTR TCA 90 bp TTAAACAGTTCCACAGGCTCGCCTCTTCAGAATGGCAAAACTCTTCTCAGTGTCCAGGAAGAAATCATATaGCGTTCAGCAGGAGGCTTT +
Preference number: 4 (lower is better)
Translates to: LNSSTGSPLQNGKTLLSVQEEII*RSAGGF
Trigger: AAAGCCTCCTGCTGAACGTCATATGATTTCTTCCTG...GACACTGAGAAGAGTTTTGCCATTCTGAAGAGGCGAGCCTGTGGAACTGTTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614939.4
CDS-3UTR TCA 90 bp TCCATGTCATGTGGAAGCCATTGGTCATCAGGTAAAAGTTCTTCACATCTTCAGTGCTTCCCAGTGGAATaGTGTGCTCATCCAGCTTCA +
Preference number: 4 (lower is better)
Translates to: SMSCGSHWSSGKSSSHLQCFPVE*CAHPAS
Trigger: TGAAGCTGGATGAGCACATCATTCCACTGGGAAGCA...CTGAAGATGTGAAGAACTTTTACCTGATGACCAATGGCTTCCACATGACATGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000585635.5
ENST00000590692.5
ENST00000591823.5
CDS-3UTR TCA 90 bp TGTCATGTGGAAGCCATTGGTCATCAGGTAAAAGTTCTTCACATCTTCAGGCATGAAGACTGGGTGAGCTaGGTCAGTTTTGAGATGCTG +
Preference number: 4 (lower is better)
Translates to: CHVEAIGHQVKVLHIFRHEDWVS*VSFEML
Trigger: CAGCATCTCAAAACTGACTCAGCTCACCCAGTCTTC...ATGCCTGAAGATGTGAAGAACTTTTACCTGATGACCAATGGCTTCCACATGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000585635.5
ENST00000590692.5
ENST00000591823.5
CDS-3UTR TCA 90 bp TGCTTCATGGGTCAAAACCAGTGGTTTCTTTGGGGGACCTCTCTAATCAATCAGGTGACTAGTGGCTCCTaGATGAACAATGCAGTTCTA +
Preference number: 4 (lower is better)
Translates to: CFMGQNQWFLWGTSLINQVTSGS*MNNAVL
Trigger: TAGAACTGCATTGTTCATTCAGGAGCCACTAGTCAC...CTGATTGATTAGAGAGGTCCCCCAAAGAAACCACTGGTTTTGACCCATGAAGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000334295.9
ENST00000383056.7
ENST00000593035.5
CDS-3UTR TCA 90 bp GATGGAAATGTTCCATATCTTTGTGCTAATACAGAATCTACCAGCCACATGAATAGGGACCAGGCAAAGTaGGGCTGGACAACTCAGAGC +
Preference number: 4 (lower is better)
Translates to: DGNVPYLCANTESTSHMNRDQAK*GWTTQS
Trigger: GCTCTGAGTTGTCCAGCCTCACTTTGCCTGGTCCCT...ATTCATGTGGCTGGTAGATTCTGTATTAGCACAAAGATATGGAACATTTCCATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334295.9
CDS-3UTR TCA 90 bp GACCTTAAACAGTTCCACAGGCTCGCCTCTTCAGAATGGCAAAACTCTTCTCAGATTAGTTCAAAAGTGTaGCACCTTTTCTGGGCAAGG +
Preference number: 4 (lower is better)
Translates to: DLKQFHRLASSEWQNSSQISSKV*HLFWAR
Trigger: CCTTGCCCAGAAAAGGTGTCACACTTTTGAACTAAT...CTGAGAAGAGTTTTGCCATTCTGAAGAGGCGAGCCTGTGGAACTGTTTAAGGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000590258.2
CDS-3UTR TCA 90 bp TATTGTTGGTCGTCTGTTGGATTTGTGAGGTTGTTGGGTCTTGTGGAACCCCTCTCACATCCAACAGTTTaGAAAGGGAGAGCTCAATTC +
Preference number: 4 (lower is better)
Translates to: YCWSSVGFVRLLGLVEPLSHPTV*KGRAQF
Trigger: GAATTGAGCTCTCCCTTTTCAAACTGTTGGATGTGA...GAGGGGTTCCACAAGACCCAACAACCTCACAAATCCAACAGACGACCAACAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590258.2
CDS-3UTR TCA 90 bp ATATCACACTGCGAGAGTCAAAGTGAGGCTTCTCTGGCTGATCATCACTGGCTTCATAGCACTTCTCATTaGGAGGTGAGTCTATTTCTC +
Preference number: 4 (lower is better)
Translates to: ISHCESQSEASLADHHWLHSTSH*EVSLFL
Trigger: GAGAAATAGACTCACCTCTCAATGAGAAGTGCTATG...AAGCCAGTGATGATCAGCCAGAGAAGCCTCACTTTGACTCTCGCAGTGTGATAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585635.5
CDS-3UTR GCA 90 bp CCAGCTTCACACTCCATGTCATGTGGAAGCCATTGGTCATCAGGTAAAAGTTCTGCTCAAATATCACACTaGGAGAGTCAAAGTGAGGCT +
Preference number: 4 (lower is better)
Translates to: PASHSMSCGSHWSSGKSSAQISH*ESQSEA
Trigger: AGCCTCACTTTGACTCTCGCAGTGTGATATTTGAGC...AGAACTTTTACCTGATGACCAATGGCTTCCACATGACATGGAGTGTGAAGCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000585635.5
ENST00000590692.5
ENST00000591823.5
CDS-3UTR GCA 90 bp CCCCTTGGCCAGCAGAGAGTCTGTTCACTTGGTTGGAGAGTTTTATTTGTAGTTGCTCAAATATCACACTaGGAGAGTCAAAGTGAGGCT +
Preference number: 4 (lower is better)
Translates to: PLGQQRVCSLGWRVLFVVAQISH*ESQSEA
Trigger: AGCCTCACTTTGACTCTCGCAGTGTGATATTTGAGC...AACTACAAATAAAACTCTCCAACCAAGTGAACAGACTCTCTGCTGGCCAAGGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000590842.5
ENST00000591906.5
CDS-3UTR GCA 90 bp GAGTCCCCTTGGCCAGCAGAGAGTCTGTTCACTTGGTTGGAGAGTTTTATTTGTCTTTCCCACTGCCATTaGATGAATCCAGCTCAAATA +
Preference number: 4 (lower is better)
Translates to: ESPWPAESLFTWLESFICLSHCH*MNPAQI
Trigger: TATTTGAGCTGGATTCATGCAATGGCAGTGGGAAAG...ACAAATAAAACTCTCCAACCAAGTGAACAGACTCTCTGCTGGCCAAGGGGACTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000590842.5
ENST00000591906.5
CDS-3UTR GCA 90 bp GACCTTAAACAGTTCCACAGGCTCGCCTCTTCAGAATGGCAAAACTCTTCTCAGCTTTCCCACTGCCATTaGATGAATCCAGCTCAAATA +
Preference number: 4 (lower is better)
Translates to: DLKQFHRLASSEWQNSSQLSHCH*MNPAQI
Trigger: TATTTGAGCTGGATTCATGCAATGGCAGTGGGAAAG...CTGAGAAGAGTTTTGCCATTCTGAAGAGGCGAGCCTGTGGAACTGTTTAAGGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614939.4
CDS-3UTR GCA 90 bp TCCAGTGCCGTTGGCTCTTCCTTTGATCAATTCTGGCAAGAAAAATACTTCTGGGGCAAACTTTCCCACTaGCATTGCATGAATCCAGCT +
Preference number: 4 (lower is better)
Translates to: SSAVGSSFDQFWQEKYFWGKLSH*HCMNPA
Trigger: AGCTGGATTCATGCAATGGCAGTGGGAAAGTTTGCC...CCAGAAGTATTTTTCTTGCCAGAATTGATCAAAGGAAGAGCCAACGGCACTGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334295.9
CDS-3UTR GCA 90 bp CCTTGGCCAGCAGAGAGTCTGTTCACTTGGTTGGAGAGTTTTATTTGTAGTTCTGGCAAACTTTCCCACTaGCATTGCATGAATCCAGCT +
Preference number: 4 (lower is better)
Translates to: PWPAESLFTWLESFICSSGKLSH*HCMNPA
Trigger: AGCTGGATTCATGCAATGGCAGTGGGAAAGTTTGCC...AGAACTACAAATAAAACTCTCCAACCAAGTGAACAGACTCTCTGCTGGCCAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591906.5
CDS-3UTR GCA 90 bp TCCCACTGCCATTGCATGAATCCAGCTCAAATATCACACTGCGAGAGTCAAAGTGTGTCTGTGAGAAAATaGCAGTATAACGCTCTGTCC +
Preference number: 4 (lower is better)
Translates to: SHCHCMNPAQISHCESQSVSVRK*QYNALS
Trigger: GGACAGAGCGTTATACTGGCATTTTCTCACAGACAC...ACTTTGACTCTCGCAGTGTGATATTTGAGCTGGATTCATGCAATGGCAGTGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585635.5
ENST00000591823.5
CDS-3UTR GCA 90 bp CAGGACCTTAAACAGTTCCACAGGCTCGCCTCTTCAGAATGGCAAAACTCTTCTATGGGAATACCATCATaGCAAGCTAAACACAAGCCA +
Preference number: 4 (lower is better)
Translates to: QDLKQFHRLASSEWQNSSMGIPS*QAKHKP
Trigger: TGGCTTGTGTTTAGCTTGGCATGATGGTATTCCCAT...AGAAGAGTTTTGCCATTCTGAAGAGGCGAGCCTGTGGAACTGTTTAAGGTCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590258.2
CDS-3UTR GCA 90 bp GAGGCTGTCCATTGGAATCATCTGTCTTGCTTATTGAAAATGCAGGTTCCTGGGGGGAAGTTGGGAACCTaGAATGTAACCATTTCCTCA +
Preference number: 4 (lower is better)
Translates to: EAVHWNHLSCLLKMQVPGGKLGT*NVTISS
Trigger: TGAGGAAATGGTTACATTGCAGGTTCCCAACTTCCC...CCCAGGAACCTGCATTTTCAATAAGCAAGACAGATGATTCCAATGGACAGCCTC
46% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000589049.5
CDS-3UTR GCA 90 bp TCTGAAAATTATAATATAAAACAAGCCGTGCTTGCTCTAACTAAGGCTGCCTGGGGAAAGCTCAGAACCTaGACAGCCCACTCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: SENYNIKQAVLALTKAAWGKLRT*TAHSAA
Trigger: AGCTGCAGAGTGGGCTGTGCAGGTTCTGAGCTTTCC...CCAGGCAGCCTTAGTTAGAGCAAGCACGGCTTGTTTTATATTATAATTTTCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000587382.5
CDS-3UTR CCA 90 bp GCTAATGTCGGTGGGACTAAAAGCCTTACAATTTTGGTCATTCAACTAGAAAGACCGAGGCCAATTTCATaGCATGCCGGGAACGGTAGT +
Preference number: 4 (lower is better)
Translates to: ANVGGTKSLTILVIQLERPRPIS*HAGNGS
Trigger: ACTACCGTTCCCGGCATGCCATGAAATTGGCCTCGG...TCTTTCTAGTTGAATGACCAAAATTGTAAGGCTTTTAGTCCCACCGACATTAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334295.9
ENST00000383056.7
ENST00000593035.5
CDS-3UTR CCA 90 bp AAACTTTCCCACTGCCATTGCATGAATCCAGCTCAAATATCACACTGCGAGAGTACACTCCATGTCATGTaGAAGCCATTGGTCATCAGG +
Preference number: 4 (lower is better)
Translates to: KLSHCHCMNPAQISHCESTLHVM*KPLVIR
Trigger: CCTGATGACCAATGGCTTCCACATGACATGGAGTGT...ACTCTCGCAGTGTGATATTTGAGCTGGATTCATGCAATGGCAGTGGGAAAGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000585635.5
ENST00000590692.5
ENST00000591823.5
CDS-3UTR CCA 90 bp CTTCACACTCCATGTCATGTGGAAGCCATTGGTCATCAGGTAAAAGTTCTTCACCTGGCTGATCATCACTaGCTTCATGTGTATCGTCCT +
Preference number: 4 (lower is better)
Translates to: LHTPCHVEAIGHQVKVLHLADHH*LHVYRP
Trigger: AGGACGATACACATGAAGCCAGTGATGATCAGCCAG...GTGAAGAACTTTTACCTGATGACCAATGGCTTCCACATGACATGGAGTGTGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000585635.5
ENST00000590692.5
ENST00000591823.5
CDS-3UTR CCA 90 bp GCTTCACACTCCATGTCATGTGGAAGCCATTGGTCATCAGGTAAAAGTTCTTCAAAAGTGAGGCTTCTCTaGCTGATCATCACTGGCTTC +
Preference number: 4 (lower is better)
Translates to: ASHSMSCGSHWSSGKSSSKVRLL*LIITGF
Trigger: GAAGCCAGTGATGATCAGCCAGAGAAGCCTCACTTT...TGAAGAACTTTTACCTGATGACCAATGGCTTCCACATGACATGGAGTGTGAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000585635.5
ENST00000590692.5
ENST00000591823.5
CDS-3UTR CCA 90 bp CATGTGGAAGCCATTGGTCATCAGGTAAAAGTTCTTCACATCTTCAGGCATCACAAAGTGAGGCTTCTCTaGCTGATCATCACTGGCTTC +
Preference number: 4 (lower is better)
Translates to: HVEAIGHQVKVLHIFRHHKVRLL*LIITGF
Trigger: GAAGCCAGTGATGATCAGCCAGAGAAGCCTCACTTT...GTGATGCCTGAAGATGTGAAGAACTTTTACCTGATGACCAATGGCTTCCACATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000585635.5
ENST00000590692.5
ENST00000591823.5
CDS-3UTR CCA 90 bp GATGGAAATGTTCCATATCTTTGTGCTAATACAGAATCTACCAGCCACATGAATCAGCACAACCTGCTCTaGAGGCCTCACTACGAGCCT +
Preference number: 4 (lower is better)
Translates to: DGNVPYLCANTESTSHMNQHNLL*RPHYEP
Trigger: AGGCTCGTAGTGAGGCCTCCAGAGCAGGTTGTGCTG...ATTCATGTGGCTGGTAGATTCTGTATTAGCACAAAGATATGGAACATTTCCATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334295.9
ENST00000383056.7
ENST00000593035.5
CDS-3UTR CCA 90 bp CTGGCTAATGTCGGTGGGACTAAAAGCCTTACAATTTTGGTCATTCAACTAGAACAAAGGAAGGAAGTCTaGCCAATCACCGGGGTAGAG +
Preference number: 4 (lower is better)
Translates to: LANVGGTKSLTILVIQLEQRKEV*PITGVE
Trigger: CTCTACCCCGGTGATTGGCCAGACTTCCTTCCTTTG...TTCTAGTTGAATGACCAAAATTGTAAGGCTTTTAGTCCCACCGACATTAGCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000334295.9
CDS-3UTR CCA 90 bp GTGCCGTTGGCTCTTCCTTTGATCAATTCTGGCAAGAAAAATACTTCTGGAAGAATGGAAAGTGGTAGGTaGAGGAGATATCGAAGGCGC +
Preference number: 4 (lower is better)
Translates to: VPLALPLINSGKKNTSGRMESGR*RRYRRR
Trigger: GCGCCTTCGATATCTCCTCCACCTACCACTTTCCAT...TCTTCCAGAAGTATTTTTCTTGCCAGAATTGATCAAAGGAAGAGCCAACGGCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334295.9
CDS-3UTR CCA 90 bp TGGAGTCCCCTTGGCCAGCAGAGAGTCTGTTCACTTGGTTGGAGAGTTTTATTTCCTCCCATCCTGTTATaGTCAGAAACTCAGTTTCTA +
Preference number: 4 (lower is better)
Translates to: WSPLGQQRVCSLGWRVLFPPILL*SETQFL
Trigger: TAGAAACTGAGTTTCTGACCATAACAGGATGGGAGG...AAATAAAACTCTCCAACCAAGTGAACAGACTCTCTGCTGGCCAAGGGGACTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000590842.5
ENST00000591906.5
ENST00000610723.4
CDS-3UTR CCA 90 bp CTTAAACAGTTCCACAGGCTCGCCTCTTCAGAATGGCAAAACTCTTCTCAGTGTCTCGCCTCTTCAGAATaGCAAAACTCTTCTCAGTGT +
Preference number: 4 (lower is better)
Translates to: LKQFHRLASSEWQNSSQCLASSE*QNSSQC
Trigger: ACACTGAGAAGAGTTTTGCCATTCTGAAGAGGCGAG...ACACTGAGAAGAGTTTTGCCATTCTGAAGAGGCGAGCCTGTGGAACTGTTTAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000590258.2
ENST00000590652.5
ENST00000614939.4
CDS-3UTR CCA 90 bp AAATCATGGAAGATGGGGTATCCATCCCCTCAAACATTTATCCTTTGTGTGAGATCAGACCTTGGCCTGTaGGCTAATGCCATAGCTGGT +
Preference number: 4 (lower is better)
Translates to: KSWKMGYPSPQTFILCVRSDLGL*ANAIAG
Trigger: ACCAGCTATGGCATTAGCCCACAGGCCAAGGTCTGA...TCTCACACAAAGGATAAATGTTTGAGGGGATGGATACCCCATCTTCCATGATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587382.5
CDS-3UTR CCA 90 bp CAGCTTCACACTCCATGTCATGTGGAAGCCATTGGTCATCAGGTAAAAGTTCTTCACCTCAGTCACACCTaGGGAAGATTCTGGATAATC +
Preference number: 4 (lower is better)
Translates to: QLHTPCHVEAIGHQVKVLHLSHT*GRFWII
Trigger: GATTATCCAGAATCTTCCCCAGGTGTGACTGAGGTG...AAGAACTTTTACCTGATGACCAATGGCTTCCACATGACATGGAGTGTGAAGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591823.5
CDS-3UTR TCA 90 bp CTGGCTAATGTCGGTGGGACTAAAAGCCTTACAATTTTGGTCATTCAACTAGAACAGGAGGCTTTTCTATaGTGGTCACCTCAGTCACAC +
Preference number: 4 (lower is better)
Translates to: LANVGGTKSLTILVIQLEQEAFL*WSPQSH
Trigger: GTGTGACTGAGGTGACCATCATAGAAAAGCCTCCTG...TTCTAGTTGAATGACCAAAATTGTAAGGCTTTTAGTCCCACCGACATTAGCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000334295.9
ENST00000383056.7
ENST00000593035.5
CDS-3UTR TCA 90 bp CATGTGGAAGCCATTGGTCATCAGGTAAAAGTTCTTCACATCTTCAGGCATCACCAGGAAGAAATCATATaGCGTTCAGCAGGAGGCTTT +
Preference number: 4 (lower is better)
Translates to: HVEAIGHQVKVLHIFRHHQEEII*RSAGGF
Trigger: AAAGCCTCCTGCTGAACGTCATATGATTTCTTCCTG...GTGATGCCTGAAGATGTGAAGAACTTTTACCTGATGACCAATGGCTTCCACATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000585635.5
ENST00000587207.1
ENST00000590692.5
ENST00000591823.5
CDS-3UTR TCA 90 bp TCATGGAAGATGGGGTATCCATCCCCTCAAACATTTATCCTTTGTGTGAGAAATTGCTTCCCAGTGGAATaGTGTGCTCATCCAGCTTCA +
Preference number: 4 (lower is better)
Translates to: SWKMGYPSPQTFILCVRNCFPVE*CAHPAS
Trigger: TGAAGCTGGATGAGCACATCATTCCACTGGGAAGCA...ATTTCTCACACAAAGGATAAATGTTTGAGGGGATGGATACCCCATCTTCCATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587382.5
CDS-3UTR TCA 90 bp CATGTACTGCCAACCCAGAACAAGTCATGGGACATAAACTATCCAACAGAATTTTGCTTCCCAGTGGAATaGTGTGCTCATCCAGCTTCA +
Preference number: 4 (lower is better)
Translates to: HVLPTQNKSWDINYPTEFCFPVE*CAHPAS
Trigger: TGAAGCTGGATGAGCACATCATTCCACTGGGAAGCA...AAATTCTGTTGGATAGTTTATGTCCCATGACTTGTTCTGGGTTGGCAGTACATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589049.5
CDS-3UTR TCA 90 bp TCACACTCCATGTCATGTGGAAGCCATTGGTCATCAGGTAAAAGTTCTTCACATACATGGAAGACTGGGTaGGCTGAGTCAGTTTTGAGA +
Preference number: 4 (lower is better)
Translates to: SHSMSCGSHWSSGKSSSHTWKTG*AESVLR
Trigger: TCTCAAAACTGACTCAGCTCACCCAGTCTTCCATGT...ATGTGAAGAACTTTTACCTGATGACCAATGGCTTCCACATGACATGGAGTGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000585635.5
ENST00000590692.5
ENST00000591823.5
CDS-3UTR TCA 90 bp TCCATGTCATGTGGAAGCCATTGGTCATCAGGTAAAAGTTCTTCACATCTTCAGACATGGAAGACTGGGTaGGCTGAGTCAGTTTTGAGA +
Preference number: 4 (lower is better)
Translates to: SMSCGSHWSSGKSSSHLQTWKTG*AESVLR
Trigger: TCTCAAAACTGACTCAGCTCACCCAGTCTTCCATGT...CTGAAGATGTGAAGAACTTTTACCTGATGACCAATGGCTTCCACATGACATGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000585635.5
ENST00000590692.5
ENST00000591823.5
CDS-3UTR TCA 90 bp TTAAACAGTTCCACAGGCTCGCCTCTTCAGAATGGCAAAACTCTTCTCAGTGTCATTAGCTTCACAGACTaGGTCTCCACAACACCAAAA +
Preference number: 4 (lower is better)
Translates to: LNSSTGSPLQNGKTLLSVISFTD*VSTTPK
Trigger: TTTTGGTGTTGTGGAGACTCAGTCTGTGAAGCTAAT...GACACTGAGAAGAGTTTTGCCATTCTGAAGAGGCGAGCCTGTGGAACTGTTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590258.2
CDS-3UTR TCA 90 bp CTTAAACAGTTCCACAGGCTCGCCTCTTCAGAATGGCAAAACTCTTCTCAGTGTCTTATATTTAGGGGATaGTGGGAAGGCATAGACCAT +
Preference number: 4 (lower is better)
Translates to: LKQFHRLASSEWQNSSQCLIFRG*WEGIDH
Trigger: ATGGTCTATGCCTTCCCATCATCCCCTAAATATAAG...ACACTGAGAAGAGTTTTGCCATTCTGAAGAGGCGAGCCTGTGGAACTGTTTAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590258.2
CDS-3UTR GCA 90 bp GGGACTAAAAGCCTTACAATTTTGGTCATTCAACTAGAAAGAGGCCTACGGTCCGCTCAAATATCACACTaGGAGAGTCAAAGTGAGGCT +
Preference number: 4 (lower is better)
Translates to: GTKSLTILVIQLERGLRSAQISH*ESQSEA
Trigger: AGCCTCACTTTGACTCTCGCAGTGTGATATTTGAGC...GGACCGTAGGCCTCTTTCTAGTTGAATGACCAAAATTGTAAGGCTTTTAGTCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334295.9
ENST00000383056.7
ENST00000593035.5
CDS-3UTR GCA 90 bp AAACTTTCCCACTGCCATTGCATGAATCCAGCTCAAATATCACACTGCGAGAGTGCTCAAATATCACACTaGGAGAGTCAAAGTGAGGCT +
Preference number: 4 (lower is better)
Translates to: KLSHCHCMNPAQISHCESAQISH*ESQSEA
Trigger: AGCCTCACTTTGACTCTCGCAGTGTGATATTTGAGC...ACTCTCGCAGTGTGATATTTGAGCTGGATTCATGCAATGGCAGTGGGAAAGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000585635.5
ENST00000590692.5
ENST00000591823.5
CDS-3UTR GCA 90 bp TCCCACTGCCATTGCATGAATCCAGCTCAAATATCACACTGCGAGAGTCAAAGTCTTTCCCACTGCCATTaGATGAATCCAGCTCAAATA +
Preference number: 4 (lower is better)
Translates to: SHCHCMNPAQISHCESQSLSHCH*MNPAQI
Trigger: TATTTGAGCTGGATTCATGCAATGGCAGTGGGAAAG...ACTTTGACTCTCGCAGTGTGATATTTGAGCTGGATTCATGCAATGGCAGTGGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000585635.5
ENST00000590692.5
ENST00000591823.5
CDS-3UTR GCA 90 bp CCCCTTGGCCAGCAGAGAGTCTGTTCACTTGGTTGGAGAGTTTTATTTGTAGTTCTTTCCCACTGCCATTaGATGAATCCAGCTCAAATA +
Preference number: 4 (lower is better)
Translates to: PLGQQRVCSLGWRVLFVVLSHCH*MNPAQI
Trigger: TATTTGAGCTGGATTCATGCAATGGCAGTGGGAAAG...AACTACAAATAAAACTCTCCAACCAAGTGAACAGACTCTCTGCTGGCCAAGGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000590842.5
ENST00000591906.5
CDS-3UTR GCA 90 bp GTGCCGTTGGCTCTTCCTTTGATCAATTCTGGCAAGAAAAATACTTCTGGAAGATACATGCTGAACCATTaGTTGGCCTGTGGGCTAATG +
Preference number: 4 (lower is better)
Translates to: VPLALPLINSGKKNTSGRYMLNH*LACGLM
Trigger: CATTAGCCCACAGGCCAAGCAATGGTTCAGCATGTA...TCTTCCAGAAGTATTTTTCTTGCCAGAATTGATCAAAGGAAGAGCCAACGGCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334295.9
CDS-3UTR GCA 90 bp ACAATGGGAATACCATCATGCCAAGCTAAACACAAGCCAATTCTAAGTCAGTTATCTCCAGGAGTCCCCTaGACATACCTTCTCCATCGT +
Preference number: 4 (lower is better)
Translates to: TMGIPSCQAKHKPILSQLSPGVP*TYLLHR
Trigger: ACGATGGAGAAGGTATGTGCAGGGGACTCCTGGAGA...TAACTGACTTAGAATTGGCTTGTGTTTAGCTTGGCATGATGGTATTCCCATTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590258.2
CDS-3UTR CCA 90 bp TGTCATGTGGAAGCCATTGGTCATCAGGTAAAAGTTCTTCACATCTTCAGGCATACACTCCATGTCATGTaGAAGCCATTGGTCATCAGG +
Preference number: 4 (lower is better)
Translates to: CHVEAIGHQVKVLHIFRHTLHVM*KPLVIR
Trigger: CCTGATGACCAATGGCTTCCACATGACATGGAGTGT...ATGCCTGAAGATGTGAAGAACTTTTACCTGATGACCAATGGCTTCCACATGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000585635.5
ENST00000587207.1
ENST00000590692.5
ENST00000591823.5
CDS-3UTR CCA 90 bp TCCATGTCATGTGGAAGCCATTGGTCATCAGGTAAAAGTTCTTCACATCTTCAGACACTCCATGTCATGTaGAAGCCATTGGTCATCAGG +
Preference number: 4 (lower is better)
Translates to: SMSCGSHWSSGKSSSHLQTLHVM*KPLVIR
Trigger: CCTGATGACCAATGGCTTCCACATGACATGGAGTGT...CTGAAGATGTGAAGAACTTTTACCTGATGACCAATGGCTTCCACATGACATGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000585635.5
ENST00000587207.1
ENST00000590692.5
ENST00000591823.5
CDS-3UTR CCA 90 bp AGCCTGGCTAATGTCGGTGGGACTAAAAGCCTTACAATTTTGGTCATTCAACTACTGGCTGATCATCACTaGCTTCATGTGTATCGTCCT +
Preference number: 4 (lower is better)
Translates to: SLANVGGTKSLTILVIQLLADHH*LHVYRP
Trigger: AGGACGATACACATGAAGCCAGTGATGATCAGCCAG...TAGTTGAATGACCAAAATTGTAAGGCTTTTAGTCCCACCGACATTAGCCAGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334295.9
ENST00000593035.5
CDS-3UTR CCA 90 bp AGCCTGGCTAATGTCGGTGGGACTAAAAGCCTTACAATTTTGGTCATTCAACTAATGGGTCAAAACCAGTaGTTTCTTTGGGGGACCTCT +
Preference number: 4 (lower is better)
Translates to: SLANVGGTKSLTILVIQLMGQNQ*FLWGTS
Trigger: AGAGGTCCCCCAAAGAAACCACTGGTTTTGACCCAT...TAGTTGAATGACCAAAATTGTAAGGCTTTTAGTCCCACCGACATTAGCCAGGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000334295.9
ENST00000383056.7
ENST00000593035.5
CDS-3UTR CCA 90 bp AATGAACAATGCAGTTCTAATGCTTCATGGGTCAAAACCAGTGGTTTCTTTGGGTTTCCTCAGGGGCTATaGAAAGTGGTAGGTGGAGGA +
Preference number: 4 (lower is better)
Translates to: NEQCSSNASWVKTSGFFGFPQGL*KVVGGG
Trigger: TCCTCCACCTACCACTTTCCATAGCCCCTGAGGAAA...CCCAAAGAAACCACTGGTTTTGACCCATGAAGCATTAGAACTGCATTGTTCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334295.9
CDS-3UTR CCA 90 bp ATGTGCTCATCCAGCTTCACACTCCATGTCATGTGGAAGCCATTGGTCATCAGGTCTTTAGATATGCCGTaGATTAAAACTCTCTGTGGT +
Preference number: 4 (lower is better)
Translates to: MCSSSFTLHVMWKPLVIRSLDMP*IKTLCG
Trigger: ACCACAGAGAGTTTTAATCCACGGCATATCTAAAGA...CCTGATGACCAATGGCTTCCACATGACATGGAGTGTGAAGCTGGATGAGCACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585635.5
CDS-3UTR CCA 90 bp ATGAATCCAGCTCAAATATCACACTGCGAGAGTCAAAGTGAGGCTTCTCTGGCTCACCTCAGTCACACCTaGGGAAGATTATCTTTAGAT +
Preference number: 4 (lower is better)
Translates to: MNPAQISHCESQSEASLAHLSHT*GRLSLD
Trigger: ATCTAAAGATAATCTTCCCCAGGTGTGACTGAGGTG...AGCCAGAGAAGCCTCACTTTGACTCTCGCAGTGTGATATTTGAGCTGGATTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585635.5
CDS-3UTR CCA 90 bp ACAGTTATTCTTTTGTTCCCAGGAAGAAATCATATGACGTTCAGCAGGAGGCTTCACCTCAGTCACACCTaGGGAAGATTCTGGAAGAGA +
Preference number: 4 (lower is better)
Translates to: TVILLFPGRNHMTFSRRLHLSHT*GRFWKR
Trigger: TCTCTTCCAGAATCTTCCCCAGGTGTGACTGAGGTG...AAGCCTCCTGCTGAACGTCATATGATTTCTTCCTGGGAACAAAAGAATAACTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590692.5
CDS-3UTR TCA 90 bp ACTGCCAACCCAGAACAAGTCATGGGACATAAACTATCCAACAGAATTTCATTACAGGAGGCTTTTCTATaGTGGTCACCTCAGTCACAC +
Preference number: 4 (lower is better)
Translates to: TANPEQVMGHKLSNRISLQEAFL*WSPQSH
Trigger: GTGTGACTGAGGTGACCATCATAGAAAAGCCTCCTG...TAATGAAATTCTGTTGGATAGTTTATGTCCCATGACTTGTTCTGGGTTGGCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589049.5
CDS-3UTR TCA 90 bp TATTCTTTTGTTCCCAGGAAGAAATCATATGACGTTCAGCAGGAGGCTTTTCTACAGGAGGCTTTTCTATaGTGGTCACCTCAGTCACAC +
Preference number: 4 (lower is better)
Translates to: YSFVPRKKSYDVQQEAFLQEAFL*WSPQSH
Trigger: GTGTGACTGAGGTGACCATCATAGAAAAGCCTCCTG...TAGAAAAGCCTCCTGCTGAACGTCATATGATTTCTTCCTGGGAACAAAAGAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000585635.5
ENST00000590692.5
ENST00000591823.5
CDS-3UTR TCA 90 bp TTCAGGCATCACACAGTTATTCTTTTGTTCCCAGGAAGAAATCATATGACGTTCCAGGAGGCTTTTCTATaGTGGTCACCTCAGTCACAC +
Preference number: 4 (lower is better)
Translates to: FRHHTVILLFPGRNHMTFQEAFL*WSPQSH
Trigger: GTGTGACTGAGGTGACCATCATAGAAAAGCCTCCTG...GAACGTCATATGATTTCTTCCTGGGAACAAAAGAATAACTGTGTGATGCCTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000585635.5
ENST00000590692.5
ENST00000591823.5
CDS-3UTR TCA 90 bp TTGTTCCCAGGAAGAAATCATATGACGTTCAGCAGGAGGCTTTTCTATGATGGTCAGGAAGAAATCATATaGCGTTCAGCAGGAGGCTTT +
Preference number: 4 (lower is better)
Translates to: LFPGRNHMTFSRRLFYDGQEEII*RSAGGF
Trigger: AAAGCCTCCTGCTGAACGTCATATGATTTCTTCCTG...ACCATCATAGAAAAGCCTCCTGCTGAACGTCATATGATTTCTTCCTGGGAACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000585635.5
ENST00000590692.5
ENST00000591823.5
CDS-3UTR TCA 90 bp TCACACTCCATGTCATGTGGAAGCCATTGGTCATCAGGTAAAAGTTCTTCACATCAGGAAGAAATCATATaGCGTTCAGCAGGAGGCTTT +
Preference number: 4 (lower is better)
Translates to: SHSMSCGSHWSSGKSSSHQEEII*RSAGGF
Trigger: AAAGCCTCCTGCTGAACGTCATATGATTTCTTCCTG...ATGTGAAGAACTTTTACCTGATGACCAATGGCTTCCACATGACATGGAGTGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000585635.5
ENST00000587207.1
ENST00000590692.5
ENST00000591823.5
CDS-3UTR TCA 90 bp GGAAGCCATTGGTCATCAGGTAAAAGTTCTTCACATCTTCAGGCATCACACAGTGAGCTGAGTCAGTTTTaGGATGCTGTTAATTGCCAT +
Preference number: 4 (lower is better)
Translates to: GSHWSSGKSSSHLQASHSELSQF*DAVNCH
Trigger: ATGGCAATTAACAGCATCTCAAAACTGACTCAGCTC...ACTGTGTGATGCCTGAAGATGTGAAGAACTTTTACCTGATGACCAATGGCTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000585635.5
ENST00000590692.5
ENST00000591823.5
CDS-3UTR TCA 90 bp AAATATACACTCTTCTCTCTTGACATATCCCACCTAGAAGATACAGTCTCTCCTGAAGACTGGGTGAGCTaGGTCAGTTTTGAGATGCTG +
Preference number: 4 (lower is better)
Translates to: KYTLFSLDISHLEDTVSPEDWVS*VSFEML
Trigger: CAGCATCTCAAAACTGACTCAGCTCACCCAGTCTTC...AGGAGAGACTGTATCTTCTAGGTGGGATATGTCAAGAGAGAAGAGTGTATATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587382.5
CDS-3UTR TCA 90 bp GCTAATGTCGGTGGGACTAAAAGCCTTACAATTTTGGTCATTCAACTAGAAAGAAGTCGGTCTCTTCTGTaGGCAGGTTTGTGTTGTAGG +
Preference number: 4 (lower is better)
Translates to: ANVGGTKSLTILVIQLERSRSLL*AGLCCR
Trigger: CCTACAACACAAACCTGCTCACAGAAGAGACCGACT...TCTTTCTAGTTGAATGACCAAAATTGTAAGGCTTTTAGTCCCACCGACATTAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334295.9
ENST00000383056.7
ENST00000593035.5
CDS-3UTR TCA 90 bp CACACACACACACACACACACACACACACACGTTTAAATGACCACACTGAATTATCAGTGCTAAGGGATTaGGGGTTGAGTGTTGAAGAA +
Preference number: 4 (lower is better)
Translates to: HTHTHTHTHTRLNDHTELSVLRD*GLSVEE
Trigger: TTCTTCAACACTCAACCCTCAATCCCTTAGCACTGA...TAATTCAGTGTGGTCATTTAAACGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334295.9
CDS-3UTR TCA 90 bp TGCTTCATGGGTCAAAACCAGTGGTTTCTTTGGGGGACCTCTCTAATCAATCAGAATCTACCAGCCACATaGATACTCAAAATGTGGCTA +
Preference number: 4 (lower is better)
Translates to: CFMGQNQWFLWGTSLINQNLPAT*ILKMWL
Trigger: TAGCCACATTTTGAGTATTCATGTGGCTGGTAGATT...CTGATTGATTAGAGAGGTCCCCCAAAGAAACCACTGGTTTTGACCCATGAAGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000334295.9
ENST00000383056.7
ENST00000593035.5
CDS-3UTR TCA 90 bp AATGCAGTTCTAATGCTTCATGGGTCAAAACCAGTGGTTTCTTTGGGGGACCTCAAGCTGCAAAAGAAATaGGCAGAGCGAGATATTTGT +
Preference number: 4 (lower is better)
Translates to: NAVLMLHGSKPVVSLGDLKLQKK*AERDIC
Trigger: ACAAATATCTCGCTCTGCTCATTTCTTTTGCAGCTT...GAGGTCCCCCAAAGAAACCACTGGTTTTGACCCATGAAGCATTAGAACTGCATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000334295.9
ENST00000383056.7
ENST00000593035.5
CDS-3UTR TCA 90 bp AGCCTGGCTAATGTCGGTGGGACTAAAAGCCTTACAATTTTGGTCATTCAACTAGATTTAGAAATGCTGTaGTTCGGGGGATCTCCAAGT +
Preference number: 4 (lower is better)
Translates to: SLANVGGTKSLTILVIQLDLEML*FGGSPS
Trigger: ACTTGGAGATCCCCCGAATCACAGCATTTCTAAATC...TAGTTGAATGACCAAAATTGTAAGGCTTTTAGTCCCACCGACATTAGCCAGGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000334295.9
CDS-3UTR TCA 90 bp TCCATGTCATGTGGAAGCCATTGGTCATCAGGTAAAAGTTCTTCACATCTTCAGATTTCTCCAACTTCTTaGGTTTGGAGTTGGCCTGTG +
Preference number: 4 (lower is better)
Translates to: SMSCGSHWSSGKSSSHLQISPTS*VWSWPV
Trigger: CACAGGCCAACTCCAAACTCAAGAAGTTGGAGAAAT...CTGAAGATGTGAAGAACTTTTACCTGATGACCAATGGCTTCCACATGACATGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585635.5
CDS-3UTR GCA 90 bp TCCAGTGCCGTTGGCTCTTCCTTTGATCAATTCTGGCAAGAAAAATACTTCTGGCTTTCCCACTGCCATTaGATGAATCCAGCTCAAATA +
Preference number: 4 (lower is better)
Translates to: SSAVGSSFDQFWQEKYFWLSHCH*MNPAQI
Trigger: TATTTGAGCTGGATTCATGCAATGGCAGTGGGAAAG...CCAGAAGTATTTTTCTTGCCAGAATTGATCAAAGGAAGAGCCAACGGCACTGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334295.9
CDS-3UTR GCA 90 bp AAATCATGGAAGATGGGGTATCCATCCCCTCAAACATTTATCCTTTGTGTGAGAGGCAAACTTTCCCACTaGCATTGCATGAATCCAGCT +
Preference number: 4 (lower is better)
Translates to: KSWKMGYPSPQTFILCVRGKLSH*HCMNPA
Trigger: AGCTGGATTCATGCAATGGCAGTGGGAAAGTTTGCC...TCTCACACAAAGGATAAATGTTTGAGGGGATGGATACCCCATCTTCCATGATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587382.5
CDS-3UTR GCA 90 bp CATGTACTGCCAACCCAGAACAAGTCATGGGACATAAACTATCCAACAGAATTTGGCAAACTTTCCCACTaGCATTGCATGAATCCAGCT +
Preference number: 4 (lower is better)
Translates to: HVLPTQNKSWDINYPTEFGKLSH*HCMNPA
Trigger: AGCTGGATTCATGCAATGGCAGTGGGAAAGTTTGCC...AAATTCTGTTGGATAGTTTATGTCCCATGACTTGTTCTGGGTTGGCAGTACATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589049.5
CDS-3UTR GCA 90 bp GCTAATGTCGGTGGGACTAAAAGCCTTACAATTTTGGTCATTCAACTAGAAAGATTCCAAATTCCCCATTaGTTCCAGAGGCAGGGGACA +
Preference number: 4 (lower is better)
Translates to: ANVGGTKSLTILVIQLERFQIPH*FQRQGT
Trigger: TGTCCCCTGCCTCTGGAAGCAATGGGGAATTTGGAA...TCTTTCTAGTTGAATGACCAAAATTGTAAGGCTTTTAGTCCCACCGACATTAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000334295.9
ENST00000383056.7
ENST00000593035.5
CDS-3UTR GCA 90 bp GCTAATGTCGGTGGGACTAAAAGCCTTACAATTTTGGTCATTCAACTAGAAAGAGATGGTAGAGGCCCCTaGACCTCATTCCTCAAAACT +
Preference number: 4 (lower is better)
Translates to: ANVGGTKSLTILVIQLERDGRGP*TSFLKT
Trigger: AGTTTTGAGGAATGAGGTGCAGGGGCCTCTACCATC...TCTTTCTAGTTGAATGACCAAAATTGTAAGGCTTTTAGTCCCACCGACATTAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000334295.9
CDS-3UTR GCA 90 bp GATGGAAATGTTCCATATCTTTGTGCTAATACAGAATCTACCAGCCACATGAATTCCTGGTTCCTCCGCTaGTTCACTTGTGGAATCCAG +
Preference number: 4 (lower is better)
Translates to: DGNVPYLCANTESTSHMNSWFLR*FTCGIQ
Trigger: CTGGATTCCACAAGTGAAGCAGCGGAGGAACCAGGA...ATTCATGTGGCTGGTAGATTCTGTATTAGCACAAAGATATGGAACATTTCCATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334295.9
CDS-3UTR GCA 90 bp CTGGCTAATGTCGGTGGGACTAAAAGCCTTACAATTTTGGTCATTCAACTAGAATTTTGTACTGGATCCTaGACTGAGTGGAGTCAGTCC +
Preference number: 4 (lower is better)
Translates to: LANVGGTKSLTILVIQLEFCTGS*TEWSQS
Trigger: GGACTGACTCCACTCAGTGCAGGATCCAGTACAAAA...TTCTAGTTGAATGACCAAAATTGTAAGGCTTTTAGTCCCACCGACATTAGCCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000334295.9
CDS-3UTR GCA 90 bp ACAGTTATTCTTTTGTTCCCAGGAAGAAATCATATGACGTTCAGCAGGAGGCTTAATTCCTTCCTTCCCTaGATGCCCATAGCACTTCTC +
Preference number: 4 (lower is better)
Translates to: TVILLFPGRNHMTFSRRLNSFLP*MPIALL
Trigger: GAGAAGTGCTATGGGCATGCAGGGAAGGAAGGAATT...AAGCCTCCTGCTGAACGTCATATGATTTCTTCCTGGGAACAAAAGAATAACTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585635.5
CDS-3UTR GCA 90 bp ACAGTTATTCTTTTGTTCCCAGGAAGAAATCATATGACGTTCAGCAGGAGGCTTTACTCCAAAGGTGGGTaGTGTCAATTCCTTCCTTCC +
Preference number: 4 (lower is better)
Translates to: TVILLFPGRNHMTFSRRLYSKGG*CQFLPS
Trigger: GGAAGGAAGGAATTGACAGCACCCACCTTTGGAGTA...AAGCCTCCTGCTGAACGTCATATGATTTCTTCCTGGGAACAAAAGAATAACTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585635.5
CDS-3UTR CCA 90 bp CATCACACAGTTATTCTTTTGTTCCCAGGAAGAAATCATATGACGTTCAGCAGGACACTCCATGTCATGTaGAAGCCATTGGTCATCAGG +
Preference number: 4 (lower is better)
Translates to: HHTVILLFPGRNHMTFSRTLHVM*KPLVIR
Trigger: CCTGATGACCAATGGCTTCCACATGACATGGAGTGT...CCTGCTGAACGTCATATGATTTCTTCCTGGGAACAAAAGAATAACTGTGTGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000585635.5
ENST00000590692.5
ENST00000591823.5
CDS-3UTR CCA 90 bp CATCACACAGTTATTCTTTTGTTCCCAGGAAGAAATCATATGACGTTCAGCAGGCTGGCTGATCATCACTaGCTTCATGTGTATCGTCCT +
Preference number: 4 (lower is better)
Translates to: HHTVILLFPGRNHMTFSRLADHH*LHVYRP
Trigger: AGGACGATACACATGAAGCCAGTGATGATCAGCCAG...CCTGCTGAACGTCATATGATTTCTTCCTGGGAACAAAAGAATAACTGTGTGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000585635.5
ENST00000590692.5
ENST00000591823.5
CDS-3UTR CCA 90 bp AATGAACAATGCAGTTCTAATGCTTCATGGGTCAAAACCAGTGGTTTCTTTGGGCTGGCTGATCATCACTaGCTTCATGTGTATCGTCCT +
Preference number: 4 (lower is better)
Translates to: NEQCSSNASWVKTSGFFGLADHH*LHVYRP
Trigger: AGGACGATACACATGAAGCCAGTGATGATCAGCCAG...CCCAAAGAAACCACTGGTTTTGACCCATGAAGCATTAGAACTGCATTGTTCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334295.9
ENST00000593035.5
CDS-3UTR CCA 90 bp CTGGCTAATGTCGGTGGGACTAAAAGCCTTACAATTTTGGTCATTCAACTAGAAATGGGTCAAAACCAGTaGTTTCTTTGGGGGACCTCT +
Preference number: 4 (lower is better)
Translates to: LANVGGTKSLTILVIQLEMGQNQ*FLWGTS
Trigger: AGAGGTCCCCCAAAGAAACCACTGGTTTTGACCCAT...TTCTAGTTGAATGACCAAAATTGTAAGGCTTTTAGTCCCACCGACATTAGCCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000334295.9
ENST00000383056.7
ENST00000593035.5
CDS-3UTR CCA 90 bp AATGAACAATGCAGTTCTAATGCTTCATGGGTCAAAACCAGTGGTTTCTTTGGGAAAGTGAGGCTTCTCTaGCTGATCATCACTGGCATC +
Preference number: 4 (lower is better)
Translates to: NEQCSSNASWVKTSGFFGKVRLL*LIITGI
Trigger: GATGCCAGTGATGATCAGCCAGAGAAGCCTCACTTT...CCCAAAGAAACCACTGGTTTTGACCCATGAAGCATTAGAACTGCATTGTTCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383056.7
CDS-3UTR CCA 90 bp ATGGTCAGAAACTCAGTTTCTAAGGTTCTCTGGAGTCCCCTTGGCCAGCAGAGAGTCTGTTCACTTGGTTaGAGAGTTTTATTTGTAGTT +
Preference number: 4 (lower is better)
Translates to: MVRNSVSKVLWSPLGQQRVCSLG*RVLFVV
Trigger: AACTACAAATAAAACTCTCCAACCAAGTGAACAGAC...TCTCTGCTGGCCAAGGGGACTCCAGAGAACCTTAGAAACTGAGTTTCTGACCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000590842.5
ENST00000591906.5
ENST00000610723.4
CDS-3UTR CCA 90 bp TTCCACAGGCTCGCCTCTTCAGAATGGCAAAACTCTTCTCAGTGTCCTCAGAAGAAACTTTTATTCTTCTaGGAACAGGACCTTAAACAG +
Preference number: 4 (lower is better)
Translates to: FHRLASSEWQNSSQCPQKKLLFF*EQDLKQ
Trigger: CTGTTTAAGGTCCTGTTCCCAGAAGAATAAAAGTTT...CTTCTGAGGACACTGAGAAGAGTTTTGCCATTCTGAAGAGGCGAGCCTGTGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590652.5
CDS-3UTR CCA 90 bp TTCTGGGAACAGGACCTTAAACAGTTCCACAGGCTCGCCTCTTCAGAATGGCAAAAACTTTTATTCTTCTaGGAACAGGACCTTAAACAG +
Preference number: 4 (lower is better)
Translates to: FWEQDLKQFHRLASSEWQKLLFF*EQDLKQ
Trigger: CTGTTTAAGGTCCTGTTCCCAGAAGAATAAAAGTTT...TTGCCATTCTGAAGAGGCGAGCCTGTGGAACTGTTTAAGGTCCTGTTCCCAGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000590258.2
ENST00000590652.5
ENST00000614939.4
CDS-3UTR CCA 90 bp ACAATGGGAATACCATCATGCCAAGCTAAACACAAGCCAATTCTAAGTCAGTTACATTTTCCCCTGCTCTaGAATCACCTTCCCAGCTCT +
Preference number: 4 (lower is better)
Translates to: TMGIPSCQAKHKPILSQLHFPLL*NHLPSS
Trigger: AGAGCTGGGAAGGTGATTCCAGAGCAGGGGAAAATG...TAACTGACTTAGAATTGGCTTGTGTTTAGCTTGGCATGATGGTATTCCCATTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590258.2
CDS-3UTR CCA 90 bp CTGAGTCTCCACAACACCAAAATATCCAGATGTAAACCCCAAACTTGTACACAAGTCCCCAGCTATTGTTaGTCGTCTGTTGGATTTGTG +
Preference number: 4 (lower is better)
Translates to: LSLHNTKISRCKPQTCTQVPSYC*SSVGFV
Trigger: CACAAATCCAACAGACGACCAACAATAGCTGGGGAC...TTGTGTACAAGTTTGGGGTTTACATCTGGATATTTTGGTGTTGTGGAGACTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000590258.2
CDS-3UTR CCA 90 bp CTCCTGAATCAGATAGGGAAGTTGGGAACCTGCAATGTAACCATTTCCTCAGTATACCATAGTTTACAATaGCAGGTGTTCCTCCCTTAC +
Preference number: 4 (lower is better)
Translates to: LLNQIGKLGTCNVTISSVYHSLQ*QVFLPY
Trigger: GTAAGGGAGGAACACCTGCCATTGTAAACTATGGTA...TACTGAGGAAATGGTTACATTGCAGGTTCCCAACTTCCCTATCTGATTCAGGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589049.5
CDS-3UTR CCA 90 bp TGTGGAAGCCATTGGTCATCAGGTAAAAGTTCTTCACATCTTCAGGCATCACACACCTGGGGAAGATTCTaGATAATCTTGCTTTTGCCA +
Preference number: 4 (lower is better)
Translates to: CGSHWSSGKSSSHLQASHTWGRF*IILLLP
Trigger: TGGCAAAAGCAAGATTATCCAGAATCTTCCCCAGGT...GTGTGATGCCTGAAGATGTGAAGAACTTTTACCTGATGACCAATGGCTTCCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000591823.5
CDS-3UTR TCA 90 bp CTGGCTAATGTCGGTGGGACTAAAAGCCTTACAATTTTGGTCATTCAACTAGAACAGGAAGAAATCATATaGCGTTCAGCAGGAGGCTTT +
Preference number: 4 (lower is better)
Translates to: LANVGGTKSLTILVIQLEQEEII*RSAGGF
Trigger: AAAGCCTCCTGCTGAACGTCATATGATTTCTTCCTG...TTCTAGTTGAATGACCAAAATTGTAAGGCTTTTAGTCCCACCGACATTAGCCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334295.9
ENST00000383056.7
ENST00000593035.5
CDS-3UTR TCA 90 bp GATGGAAATGTTCCATATCTTTGTGCTAATACAGAATCTACCAGCCACATGAATTGCTTCCCAGTGGAATaGTGTGCTCATCCAGCTTCA +
Preference number: 4 (lower is better)
Translates to: DGNVPYLCANTESTSHMNCFPVE*CAHPAS
Trigger: TGAAGCTGGATGAGCACATCATTCCACTGGGAAGCA...ATTCATGTGGCTGGTAGATTCTGTATTAGCACAAAGATATGGAACATTTCCATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334295.9
CDS-3UTR TCA 90 bp TCTGAAAATTATAATATAAAACAAGCCGTGCTTGCTCTAACTAAGGCTGCCTGGACATGGAAGACTGGGTaGGCTGAGTCAGTTTTGAGA +
Preference number: 4 (lower is better)
Translates to: SENYNIKQAVLALTKAAWTWKTG*AESVLR
Trigger: TCTCAAAACTGACTCAGCTCACCCAGTCTTCCATGT...CCAGGCAGCCTTAGTTAGAGCAAGCACGGCTTGTTTTATATTATAATTTTCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000587382.5
CDS-3UTR TCA 90 bp ACTGCCAACCCAGAACAAGTCATGGGACATAAACTATCCAACAGAATTTCATTATGGAGAACAGGGGAGTaGGAATCTGACTTTTCACTC +
Preference number: 4 (lower is better)
Translates to: TANPEQVMGHKLSNRISLWRTGE*ESDFSL
Trigger: GAGTGAAAAGTCAGATTCTCACTCCCCTGTTCTCCA...TAATGAAATTCTGTTGGATAGTTTATGTCCCATGACTTGTTCTGGGTTGGCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589049.5
CDS-3UTR TCA 90 bp AAATATACACTCTTCTCTCTTGACATATCCCACCTAGAAGATACAGTCTCTCCTAGATGCAGAAAATCCTaGAGACCTAGAACCTGCTCC +
Preference number: 4 (lower is better)
Translates to: KYTLFSLDISHLEDTVSPRCRKS*RPRTCS
Trigger: GGAGCAGGTTCTAGGTCTTCAGGATTTTCTGCATCT...AGGAGAGACTGTATCTTCTAGGTGGGATATGTCAAGAGAGAAGAGTGTATATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587382.5
CDS-3UTR GCA 90 bp ACAGTTATTCTTTTGTTCCCAGGAAGAAATCATATGACGTTCAGCAGGAGGCTTGCTCAAATATCACACTaGGAGAGTCAAAGTGAGGCT +
Preference number: 4 (lower is better)
Translates to: TVILLFPGRNHMTFSRRLAQISH*ESQSEA
Trigger: AGCCTCACTTTGACTCTCGCAGTGTGATATTTGAGC...AAGCCTCCTGCTGAACGTCATATGATTTCTTCCTGGGAACAAAAGAATAACTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000585635.5
ENST00000590692.5
ENST00000591823.5
CDS-3UTR GCA 90 bp AAGCCAATTCTAAGTCAGTTAAATATGAGCATCCCTCCAGTTGCCAACTGCAACATAAGTTTGGCAGTTTaGTCCTTAGCCTCCATTCCT +
Preference number: 4 (lower is better)
Translates to: KPILSQLNMSIPPVANCNISLAV*SLASIP
Trigger: AGGAATGGAGGCTAAGGAGCAAACTGCCAAACTTAT...GTTGCAGTTGGCAACTGGAGGGATGCTCATATTTAACTGACTTAGAATTGGCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590258.2
CDS-3UTR GCA 90 bp AAATATACACTCTTCTCTCTTGACATATCCCACCTAGAAGATACAGTCTCTCCTCATTCTCTCTTTGCCTaGCACCATGTAAGATGTGCC +
Preference number: 4 (lower is better)
Translates to: KYTLFSLDISHLEDTVSPHSLFA*HHVRCA
Trigger: GGCACATCTTACATGGTGGCAGGCAAAGAGAGAATG...AGGAGAGACTGTATCTTCTAGGTGGGATATGTCAAGAGAGAAGAGTGTATATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587382.5
CDS-3UTR CCA 90 bp ACTGCCAACCCAGAACAAGTCATGGGACATAAACTATCCAACAGAATTTCATTACTGGCTGATCATCACTaGCTTCATGTGTATCGTCCT +
Preference number: 4 (lower is better)
Translates to: TANPEQVMGHKLSNRISLLADHH*LHVYRP
Trigger: AGGACGATACACATGAAGCCAGTGATGATCAGCCAG...TAATGAAATTCTGTTGGATAGTTTATGTCCCATGACTTGTTCTGGGTTGGCAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589049.5
CDS-3UTR CCA 90 bp TCTGAAAATTATAATATAAAACAAGCCGTGCTTGCTCTAACTAAGGCTGCCTGGAAAGTGAGGCTTCTCTaGCTGATCATCACTGGCTTC +
Preference number: 4 (lower is better)
Translates to: SENYNIKQAVLALTKAAWKVRLL*LIITGF
Trigger: GAAGCCAGTGATGATCAGCCAGAGAAGCCTCACTTT...CCAGGCAGCCTTAGTTAGAGCAAGCACGGCTTGTTTTATATTATAATTTTCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587382.5
CDS-3UTR CCA 90 bp CATTGGTCATCAGGTAAAAGTTCTTCACATCTTCAGGCATCACACAGTTATTCTAAAGTGAGGCTTCTCTaGCTGATCATCACTGGCTTC +
Preference number: 4 (lower is better)
Translates to: HWSSGKSSSHLQASHSYSKVRLL*LIITGF
Trigger: GAAGCCAGTGATGATCAGCCAGAGAAGCCTCACTTT...AGAATAACTGTGTGATGCCTGAAGATGTGAAGAACTTTTACCTGATGACCAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000585635.5
ENST00000590692.5
ENST00000591823.5
CDS-3UTR CCA 90 bp GCTAATGTCGGTGGGACTAAAAGCCTTACAATTTTGGTCATTCAACTAGAAAGAAAAGTGAGGCTTCTCTaGCTGATCATCACTGGCTTC +
Preference number: 4 (lower is better)
Translates to: ANVGGTKSLTILVIQLERKVRLL*LIITGF
Trigger: GAAGCCAGTGATGATCAGCCAGAGAAGCCTCACTTT...TCTTTCTAGTTGAATGACCAAAATTGTAAGGCTTTTAGTCCCACCGACATTAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000334295.9
ENST00000593035.5
CDS-3UTR CCA 90 bp GAAGATGACATAACTTCTCAACTCCCTTCTAACCTCGCTTGTCTTGGAGAAGCAAGTTCTAATGCTTCATaGGTCAAAACCAGTGGTTTC +
Preference number: 4 (lower is better)
Translates to: EDDITSQLPSNLACLGEASSNAS*VKTSGF
Trigger: GAAACCACTGGTTTTGACCCATGAAGCATTAGAACT...TGCTTCTCCAAGACAAGCGAGGTTAGAAGGGAGTTGAGAAGTTATGTCATCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334295.9
CDS-3UTR CCA 90 bp GACCTTAAACAGTTCCACAGGCTCGCCTCTTCAGAATGGCAAAACTCTTCTCAGAAACTTTTATTCTTCTaGGAACAGGACCTTAAACAG +
Preference number: 4 (lower is better)
Translates to: DLKQFHRLASSEWQNSSQKLLFF*EQDLKQ
Trigger: CTGTTTAAGGTCCTGTTCCCAGAAGAATAAAAGTTT...CTGAGAAGAGTTTTGCCATTCTGAAGAGGCGAGCCTGTGGAACTGTTTAAGGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000590258.2
ENST00000590652.5
ENST00000614939.4
CDS-3UTR CCA 90 bp ATGTCATGTGGAAGCCATTGGTCATCAGGTAAAAGTTCTTCACATCTTCAGGCATACCATAGTTTACAATaGCAGGTGTTCCTCCCTTAC +
Preference number: 4 (lower is better)
Translates to: MSCGSHWSSGKSSSHLQAYHSLQ*QVFLPY
Trigger: GTAAGGGAGGAACACCTGCCATTGTAAACTATGGTA...TGCCTGAAGATGTGAAGAACTTTTACCTGATGACCAATGGCTTCCACATGACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591823.5
CDS-3UTR TCA 90 bp AAATATACACTCTTCTCTCTTGACATATCCCACCTAGAAGATACAGTCTCTCCTCAGGAAGAAATCATATaGCGTTCAGCAGGAGGCTTT +
Preference number: 4 (lower is better)
Translates to: KYTLFSLDISHLEDTVSPQEEII*RSAGGF
Trigger: AAAGCCTCCTGCTGAACGTCATATGATTTCTTCCTG...AGGAGAGACTGTATCTTCTAGGTGGGATATGTCAAGAGAGAAGAGTGTATATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587382.5
CDS-3UTR TCA 90 bp ACTGCCAACCCAGAACAAGTCATGGGACATAAACTATCCAACAGAATTTCATTACAGGAAGAAATCATATaGCGTTCAGCAGGAGGCTTT +
Preference number: 4 (lower is better)
Translates to: TANPEQVMGHKLSNRISLQEEII*RSAGGF
Trigger: AAAGCCTCCTGCTGAACGTCATATGATTTCTTCCTG...TAATGAAATTCTGTTGGATAGTTTATGTCCCATGACTTGTTCTGGGTTGGCAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589049.5
CDS-3UTR TCA 90 bp GTACTGCCAACCCAGAACAAGTCATGGGACATAAACTATCCAACAGAATTTCATGAGCTGAGTCAGTTTTaGGATGCTGTTAATTGCCAT +
Preference number: 4 (lower is better)
Translates to: VLPTQNKSWDINYPTEFHELSQF*DAVNCH
Trigger: ATGGCAATTAACAGCATCTCAAAACTGACTCAGCTC...ATGAAATTCTGTTGGATAGTTTATGTCCCATGACTTGTTCTGGGTTGGCAGTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589049.5
CDS-3UTR TCA 90 bp AAATATACACTCTTCTCTCTTGACATATCCCACCTAGAAGATACAGTCTCTCCTGTCTACATTGTGCTCTaGGTCTTGGGAATTCTTGTC +
Preference number: 4 (lower is better)
Translates to: KYTLFSLDISHLEDTVSPVYIVL*VLGILV
Trigger: GACAAGAATTCCCAAGACTCAGAGCACAATGTAGAC...AGGAGAGACTGTATCTTCTAGGTGGGATATGTCAAGAGAGAAGAGTGTATATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587382.5
CDS-3UTR GCA 90 bp CTGGCTAATGTCGGTGGGACTAAAAGCCTTACAATTTTGGTCATTCAACTAGAACTTTCCCACTGCCATTaGATGAATCCAGCTCAAATA +
Preference number: 4 (lower is better)
Translates to: LANVGGTKSLTILVIQLELSHCH*MNPAQI
Trigger: TATTTGAGCTGGATTCATGCAATGGCAGTGGGAAAG...TTCTAGTTGAATGACCAAAATTGTAAGGCTTTTAGTCCCACCGACATTAGCCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334295.9
ENST00000383056.7
ENST00000593035.5
CDS-3UTR GCA 90 bp GATGGAAATGTTCCATATCTTTGTGCTAATACAGAATCTACCAGCCACATGAATGGCAAACTTTCCCACTaGCATTGCATGAATCCAGCT +
Preference number: 4 (lower is better)
Translates to: DGNVPYLCANTESTSHMNGKLSH*HCMNPA
Trigger: AGCTGGATTCATGCAATGGCAGTGGGAAAGTTTGCC...ATTCATGTGGCTGGTAGATTCTGTATTAGCACAAAGATATGGAACATTTCCATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334295.9
ENST00000383056.7
ENST00000593035.5
CDS-3UTR GCA 90 bp TCTGAAAATTATAATATAAAACAAGCCGTGCTTGCTCTAACTAAGGCTGCCTGGGTGTCTGTGAGAAAATaGCAGTATAACGCTCTGTCC +
Preference number: 4 (lower is better)
Translates to: SENYNIKQAVLALTKAAWVSVRK*QYNALS
Trigger: GGACAGAGCGTTATACTGGCATTTTCTCACAGACAC...CCAGGCAGCCTTAGTTAGAGCAAGCACGGCTTGTTTTATATTATAATTTTCAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000587382.5
CDS-3UTR CCA 90 bp AATGAACAATGCAGTTCTAATGCTTCATGGGTCAAAACCAGTGGTTTCTTTGGGGCACTCAGACTTATTTaGGCACTTACACAAGATTCC +
Preference number: 4 (lower is better)
Translates to: NEQCSSNASWVKTSGFFGALRLI*ALTQDS
Trigger: GGAATCTTGTGTAAGTGCCCAAATAAGTCTGAGTGC...CCCAAAGAAACCACTGGTTTTGACCCATGAAGCATTAGAACTGCATTGTTCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334295.9
ENST00000383056.7
ENST00000593035.5
CDS-3UTR CCA 90 bp CCCCTTGGCCAGCAGAGAGTCTGTTCACTTGGTTGGAGAGTTTTATTTGTAGTTGTCTGTTCACTTGGTTaGAGAGTTTTATTTGTAGTT +
Preference number: 4 (lower is better)
Translates to: PLGQQRVCSLGWRVLFVVVCSLG*RVLFVV
Trigger: AACTACAAATAAAACTCTCCAACCAAGTGAACAGAC...AACTACAAATAAAACTCTCCAACCAAGTGAACAGACTCTCTGCTGGCCAAGGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000590842.5
ENST00000591906.5
ENST00000610723.4
CDS-3UTR CCA 90 bp ACAATGGGAATACCATCATGCCAAGCTAAACACAAGCCAATTCTAAGTCAGTTATTGTTGGTCGTCTGTTaGATTTGTGAGGTTGTTGGG +
Preference number: 4 (lower is better)
Translates to: TMGIPSCQAKHKPILSQLLLVVC*ICEVVG
Trigger: CCCAACAACCTCACAAATCCAACAGACGACCAACAA...TAACTGACTTAGAATTGGCTTGTGTTTAGCTTGGCATGATGGTATTCCCATTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590258.2
CDS-3UTR CCA 90 bp AAATATACACTCTTCTCTCTTGACATATCCCACCTAGAAGATACAGTCTCTCCTTCTTTGACTATCACATaGGGAAAGCTCAGAACCTGC +
Preference number: 4 (lower is better)
Translates to: KYTLFSLDISHLEDTVSPSLTIT*GKLRTC
Trigger: GCAGGTTCTGAGCTTTCCCCATGTGATAGTCAAAGA...AGGAGAGACTGTATCTTCTAGGTGGGATATGTCAAGAGAGAAGAGTGTATATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587382.5
CDS-3UTR CCA 90 bp AAATCATGGAAGATGGGGTATCCATCCCCTCAAACATTTATCCTTTGTGTGAGATCAAATCATGGAAGATaGGGTATCCATCCCCTCAAA +
Preference number: 4 (lower is better)
Translates to: KSWKMGYPSPQTFILCVRSNHGR*GIHPLK
Trigger: TTTGAGGGGATGGATACCCCATCTTCCATGATTTGA...TCTCACACAAAGGATAAATGTTTGAGGGGATGGATACCCCATCTTCCATGATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000587382.5
CDS-3UTR TCA 90 bp CAGGTAAAAGTTCTTCACATCTTCAGGCATCACACAGTTATTCTTTTGTTCCCAGAGCTGAGTCAGTTTTaGGATGCTGTTAATTGCCAT +
Preference number: 4 (lower is better)
Translates to: QVKVLHIFRHHTVILLFPELSQF*DAVNCH
Trigger: ATGGCAATTAACAGCATCTCAAAACTGACTCAGCTC...TGGGAACAAAAGAATAACTGTGTGATGCCTGAAGATGTGAAGAACTTTTACCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000585635.5
ENST00000590692.5
ENST00000591823.5
CDS-3UTR TCA 90 bp CTGGCTAATGTCGGTGGGACTAAAAGCCTTACAATTTTGGTCATTCAACTAGAAAAGCTGCAAAAGAAATaGGCAGAGCGAGATATTTGT +
Preference number: 4 (lower is better)
Translates to: LANVGGTKSLTILVIQLEKLQKK*AERDIC
Trigger: ACAAATATCTCGCTCTGCTCATTTCTTTTGCAGCTT...TTCTAGTTGAATGACCAAAATTGTAAGGCTTTTAGTCCCACCGACATTAGCCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000334295.9
ENST00000383056.7
ENST00000593035.5
CDS-3UTR GCA 90 bp AAATCATGGAAGATGGGGTATCCATCCCCTCAAACATTTATCCTTTGTGTGAGAGCAAAGGAGATGAGCTaGTTTAAGATGCAGAAAATC +
Preference number: 4 (lower is better)
Translates to: KSWKMGYPSPQTFILCVRAKEMS*FKMQKI
Trigger: GATTTTCTGCATCTTAAAGCAGCTCATCTCCTTTGC...TCTCACACAAAGGATAAATGTTTGAGGGGATGGATACCCCATCTTCCATGATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000587382.5
CDS-3UTR CCA 90 bp CTGGCTAATGTCGGTGGGACTAAAAGCCTTACAATTTTGGTCATTCAACTAGAAAGTTCTAATGCTTCATaGGTCAAAACCAGTGGTTTC +
Preference number: 4 (lower is better)
Translates to: LANVGGTKSLTILVIQLESSNAS*VKTSGF
Trigger: GAAACCACTGGTTTTGACCCATGAAGCATTAGAACT...TTCTAGTTGAATGACCAAAATTGTAAGGCTTTTAGTCCCACCGACATTAGCCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000334295.9
ENST00000383056.7
ENST00000593035.5
CDS-3UTR CCA 90 bp AATGAACAATGCAGTTCTAATGCTTCATGGGTCAAAACCAGTGGTTTCTTTGGGGAACTATTACAAATATaGGGAAGCAGCCAGTTAGAG +
Preference number: 4 (lower is better)
Translates to: NEQCSSNASWVKTSGFFGELLQI*GSSQLE
Trigger: CTCTAACTGGCTGCTTCCCCATATTTGTAATAGTTC...CCCAAAGAAACCACTGGTTTTGACCCATGAAGCATTAGAACTGCATTGTTCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334295.9
CDS-3UTR CCA 90 bp AGCCTGGCTAATGTCGGTGGGACTAAAAGCCTTACAATTTTGGTCATTCAACTATTGTCCTCAACAACTTaGTCTCTCTATATCCTTTTC +
Preference number: 4 (lower is better)
Translates to: SLANVGGTKSLTILVIQLLSSTT*SLYILF
Trigger: GAAAAGGATATAGAGAGACCAAGTTGTTGAGGACAA...TAGTTGAATGACCAAAATTGTAAGGCTTTTAGTCCCACCGACATTAGCCAGGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000334295.9
CDS-3UTR TCA 90 bp GCTAATGTCGGTGGGACTAAAAGCCTTACAATTTTGGTCATTCAACTAGAAAGAAATCTACCAGCCACATaGATACTCAAAATGTGGCTA +
Preference number: 4 (lower is better)
Translates to: ANVGGTKSLTILVIQLERNLPAT*ILKMWL
Trigger: TAGCCACATTTTGAGTATTCATGTGGCTGGTAGATT...TCTTTCTAGTTGAATGACCAAAATTGTAAGGCTTTTAGTCCCACCGACATTAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000334295.9
ENST00000383056.7
ENST00000593035.5
CDS-3UTR CCA 90 bp GATGGAAATGTTCCATATCTTTGTGCTAATACAGAATCTACCAGCCACATGAATAACCAGTGGTTTCTTTaGGGGACCTCTCTAATCAAT +
Preference number: 4 (lower is better)
Translates to: DGNVPYLCANTESTSHMNNQWFL*GTSLIN
Trigger: ATTGATTAGAGAGGTCCCCCAAAGAAACCACTGGTT...ATTCATGTGGCTGGTAGATTCTGTATTAGCACAAAGATATGGAACATTTCCATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334295.9
ENST00000383056.7
ENST00000593035.5
CDS-3UTR CCA 90 bp TCATGGAAGATGGGGTATCCATCCCCTCAAACATTTATCCTTTGTGTGAGAAATGTAATAATCAAATCATaGAAGATGGGGTATCCATCC +
Preference number: 4 (lower is better)
Translates to: SWKMGYPSPQTFILCVRNVIIKS*KMGYPS
Trigger: GGATGGATACCCCATCTTCCATGATTTGATTATTAC...ATTTCTCACACAAAGGATAAATGTTTGAGGGGATGGATACCCCATCTTCCATGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000587382.5
CDS-3UTR CCA 90 bp GAAGCCATTGGTCATCAGGTAAAAGTTCTTCACATCTTCAGGCATCACACAGTTAACATAATCAAGGTGTaGTATCTCATCATCTTCACA +
Preference number: 4 (lower is better)
Translates to: EAIGHQVKVLHIFRHHTVNIIKV*YLIIFT
Trigger: TGTGAAGATGATGAGATACCACACCTTGATTATGTT...AACTGTGTGATGCCTGAAGATGTGAAGAACTTTTACCTGATGACCAATGGCTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590692.5
ENST00000591823.5
CDS-3UTR TCA 90 bp GATGGAAATGTTCCATATCTTTGTGCTAATACAGAATCTACCAGCCACATGAATCAGAACTTTCTGTGGTaGTGGAAATGTTCCATATCT +
Preference number: 4 (lower is better)
Translates to: DGNVPYLCANTESTSHMNQNFLW*WKCSIS
Trigger: AGATATGGAACATTTCCATCACCACAGAAAGTTCTG...ATTCATGTGGCTGGTAGATTCTGTATTAGCACAAAGATATGGAACATTTCCATC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334295.9
ENST00000383056.7
ENST00000593035.5
CDS-3UTR TCA 90 bp GCTAATGTCGGTGGGACTAAAAGCCTTACAATTTTGGTCATTCAACTAGAAAGAAAGACTCTTAAGCGCTaGTATTTCAAGACTTTGAAC +
Preference number: 4 (lower is better)
Translates to: ANVGGTKSLTILVIQLERKTLKR*YFKTLN
Trigger: GTTCAAAGTCTTGAAATATCAGCGCTTAAGAGTCTT...TCTTTCTAGTTGAATGACCAAAATTGTAAGGCTTTTAGTCCCACCGACATTAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334295.9
CDS-3UTR CCA 90 bp GATGGAAATGTTCCATATCTTTGTGCTAATACAGAATCTACCAGCCACATGAATAGTTCTAATGCTTCATaGGTCAAAACCAGTGGTTTC +
Preference number: 4 (lower is better)
Translates to: DGNVPYLCANTESTSHMNSSNAS*VKTSGF
Trigger: GAAACCACTGGTTTTGACCCATGAAGCATTAGAACT...ATTCATGTGGCTGGTAGATTCTGTATTAGCACAAAGATATGGAACATTTCCATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334295.9
ENST00000383056.7
ENST00000593035.5
CDS-3UTR CCA 90 bp TCTGAAAATTATAATATAAAACAAGCCGTGCTTGCTCTAACTAAGGCTGCCTGGAAAATTACCCAGTCTTaGGTATGTCTTTATCAGCAG +
Preference number: 4 (lower is better)
Translates to: SENYNIKQAVLALTKAAWKITQS*VCLYQQ
Trigger: CTGCTGATAAAGACATACCCAAGACTGGGTAATTTT...CCAGGCAGCCTTAGTTAGAGCAAGCACGGCTTGTTTTATATTATAATTTTCAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000587382.5
3UTR CAA 72 bp AATGGGTTCTCAATAAATCATTTGTTGGTTGACCAATaGATGGATATTATGTTGACCCCTGTTCCAAGTGCT +
Preference number: 4 (lower is better)
Translates to: NGFSINHLLVDQ*MDIMLTPVPSA
Trigger: AGCACTTGGAACAGGGGTCAACATAATATCCATCAATTGGTCAACCAACAAATGATTTATTGAGAACCCATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590258.2
CDS-3UTR CCA 90 bp TATTCTTTTGTTCCCAGGAAGAAATCATATGACGTTCAGCAGGAGGCTTTTCTAAACATAATCAAGGTGTaGTATCTCATCATCTTCACA +
Preference number: 4 (lower is better)
Translates to: YSFVPRKKSYDVQQEAFLNIIKV*YLIIFT
Trigger: TGTGAAGATGATGAGATACCACACCTTGATTATGTT...TAGAAAAGCCTCCTGCTGAACGTCATATGATTTCTTCCTGGGAACAAAAGAATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000590692.5
ENST00000591823.5
3UTR CAA 72 bp GAAGATGGGGTATCCATCCCCTCAAACATTTATCCTTaGTGTGAGAAATGTTATTTCTTGAACAATTATTTC +
Preference number: 4 (lower is better)
Translates to: EDGVSIPSNIYP*CEKCYFLNNYF
Trigger: GAAATAATTGTTCAAGAAATAACATTTCTCACACAAAGGATAAATGTTTGAGGGGATGGATACCCCATCTTC
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587382.5
CDS CCA 90 bp GCGGCTTGCTGCAGCCCAGCCCCGGGGACGATGCCTCCTCCTCCATaGCTCGCGACCGCGATTCGCGCGCGGCGGGAGCGGGTGGAGGGC +
Preference number: 5 (lower is better)
Translates to: AACCSPAPGTMPPPP*LATAIRARRERVEG
Trigger: GCCCTCCACCCGCTCCCGCCGCGCGCGAATCGCGGTCGCGAGCCATGGAGGAGGAGGCATCGTCCCCGGGGCTGGGCTGCAGCAAGCCGC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000334295.9
ENST00000383056.7
ENST00000585635.5
ENST00000587207.1
ENST00000588909.1
ENST00000590337.5
ENST00000590842.5
ENST00000591648.1
ENST00000593035.5
ENST00000610723.4
ENST00000614939.4
CDS CCA 90 bp GCGGGTGGAGGGCCGGACCCCGCCTCAGCGCCGAGGCCAATTTCATaGCATGCCGGGAACGGTAGTTCTCGGCGCCTGAAAGCGCGGCGC +
Preference number: 5 (lower is better)
Translates to: AGGGPDPASAPRPIS*HAGNGSSRRLKARR
Trigger: GCGCCGCGCTTTCAGGCGCCGAGAACTACCGTTCCCGGCATGCCATGAAATTGGCCTCGGCGCTGAGGCGGGGTCCGGCCCTCCACCCGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000334295.9
ENST00000383056.7
ENST00000585635.5
ENST00000587207.1
ENST00000588909.1
ENST00000590337.5
ENST00000591648.1
ENST00000593035.5
ENST00000610723.4
ENST00000614939.4
CDS CCA 90 bp TCTGCGTGGTGCGGCCAATGGGGACCGAGCCTGCAGGCCGAGGCGTaGCGGCCCAGGCGCGACGCCCCGAGTGGCGGTTGTTTCAAGATG +
Preference number: 5 (lower is better)
Translates to: SAWCGQWGPSLQAEA*RPRRDAPSGGCFKM
Trigger: CATCTTGAAACAACCGCCACTCGGGGCGTCGCGCCTGGGCCGCCACGCCTCGGCCTGCAGGCTCGGTCCCCATTGGCCGCACCACGCAGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000610723.4
ENST00000614939.4
CDS TCA 90 bp CGAGGCCAATTTCATGGCATGCCGGGAACGGTAGTTCTCGGCGCCTaGAAGCGCGGCGCAGTGATGATGGGGGCCCGGGGTTGGTCTGAC +
Preference number: 5 (lower is better)
Translates to: RGQFHGMPGTVVLGA*KRGAVMMGARGWSD
Trigger: GTCAGACCAACCCCGGGCCCCCATCATCACTGCGCCGCGCTTTCAGGCGCCGAGAACTACCGTTCCCGGCATGCCATGAAATTGGCCTCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000334295.9
ENST00000383056.7
ENST00000585635.5
ENST00000587207.1
ENST00000588909.1
ENST00000590337.5
ENST00000591648.1
ENST00000593035.5
ENST00000610723.4
ENST00000614939.4
CDS-3UTR CAA 90 bp CCCTGTCCACAAATGTCAAGGAGCAGTCGGGGTGTGCCAGTGAGTCCCGGGAGCGCTGGTGAAGGCATATaGCCACTGGGGCAGGCCCAG +
Preference number: 5 (lower is better)
Translates to: PCPQMSRSSRGVPVSPGSAGEGI*PLGQAQ
Trigger: CTGGGCCTGCCCCAGTGGCAATATGCCTTCACCAGC...GCTCCCGGGACTCACTGGCACACCCCGACTGCTCCTTGACATTTGTGGACAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587129.5
CDS TCA 90 bp ATTGGCGCCTGCTGCACACGCTACAGCTCCGGGGCTTCATGCTGCTaGCTCTTTGCTTGTGGCCAGTCCCCATGCCTTGGCCTGTGGGCT +
Preference number: 5 (lower is better)
Translates to: IGACCTRYSSGASCC*LFACGQSPCLGLWA
Trigger: AGCCCACAGGCCAAGGCATGGGGACTGGCCACAAGCAAAGAGTCAGCAGCATGAAGCCCCGGAGCTGTAGCGTGTGCAGCAGGCGCCAAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591906.5
CDS-3UTR CAA 90 bp CGCCTGCTGCACACGCTACAGCTCCGGGGCTTCATGCTGCTGACTCTTTGCTTGCGCCCCGAGTGGCGGTaGTTTCAAGATGGCGGACGT +
Preference number: 5 (lower is better)
Translates to: RLLHTLQLRGFMLLTLCLRPEWR*FQDGGR
Trigger: ACGTCCGCCATCTTGAAACAACCGCCACTCGGGGCG...CAAGCAAAGAGTCAGCAGCATGAAGCCCCGGAGCTGTAGCGTGTGCAGCAGGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610723.4
CDS TCA 90 bp TTGAGTTTGGAGTTGGCCTGTGAGTGCCTTGCCCTAGGATGCGCGTaGTGCCCAGGGTCAGCTTCTCCAGGTGCGGCTTGCTGCAGCCCA +
Preference number: 5 (lower is better)
Translates to: LSLELACECLALGCA*CPGSASPGAACCSP
Trigger: TGGGCTGCAGCAAGCCGCACCTGGAGAAGCTGACCCTGGGCATCACGCGCATCCTAGGGCAAGGCACTCACAGGCCAACTCCAAACTCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585635.5
CDS-3UTR CAA 90 bp AAATTCCCCATTGCTTCCAGAGGCAGGGGACAGCACAACCTGCTCTGGAGGCCTGCTGGTGAAGGCATATaGCCACTGGGGCAGGCCCAG +
Preference number: 5 (lower is better)
Translates to: KFPIASRGRGQHNLLWRPAGEGI*PLGQAQ
Trigger: CTGGGCCTGCCCCAGTGGCAATATGCCTTCACCAGC...AGGCCTCCAGAGCAGGTTGTGCTGTCCCCTGCCTCTGGAAGCAATGGGGAATTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000334295.9
ENST00000383056.7
ENST00000593035.5
CDS-3UTR CAA 90 bp AAATTCCCCATTGCTTCCAGAGGCAGGGGACAGCACAACCTGCTCTGGAGGCCTGGAGCTGGTAGGGAGTaGGAGGGAGGGGTGCTCACT +
Preference number: 5 (lower is better)
Translates to: KFPIASRGRGQHNLLWRPGAGRE*EGGVLT
Trigger: AGTGAGCACCCCTCCCTCCAACTCCCTACCAGCTCC...AGGCCTCCAGAGCAGGTTGTGCTGTCCCCTGCCTCTGGAAGCAATGGGGAATTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000334295.9
ENST00000383056.7
ENST00000593035.5
CDS-3UTR CAA 90 bp CACACGCAAAACTGGAGGTCACCCCTAGGGCCATCTGTGCATGGAAACCACCACGGAGCTGGTAGGGAGTaGGAGGGAGGGGTGCTCACT +
Preference number: 5 (lower is better)
Translates to: HTQNWRSPLGPSVHGNHHGAGRE*EGGVLT
Trigger: AGTGAGCACCCCTCCCTCCAACTCCCTACCAGCTCC...GTGGTGGTTTCCATGCACAGATGGCCCTAGGGGTGACCTCCAGTTTTGCGTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000334295.9
ENST00000383056.7
ENST00000593035.5
CDS-3UTR CAA 90 bp CCCTGTCCACAAATGTCAAGGAGCAGTCGGGGTGTGCCAGTGAGTCCCGGGAGCAGGCCTAAAAGAGCCTaGGCCTGTGGGCTAATGCCA +
Preference number: 5 (lower is better)
Translates to: PCPQMSRSSRGVPVSPGSRPKRA*ACGLMP
Trigger: TGGCATTAGCCCACAGGCCAAGGCTCTTTTAGGCCT...GCTCCCGGGACTCACTGGCACACCCCGACTGCTCCTTGACATTTGTGGACAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587129.5
CDS-3UTR CAA 90 bp CGCCTGCTGCACACGCTACAGCTCCGGGGCTTCATGCTGCTGACTCTTTGCTTGGTTGTTCCCATGCTGTaGGATTGGCGCCTGCTGCAC +
Preference number: 5 (lower is better)
Translates to: RLLHTLQLRGFMLLTLCLVVPML*DWRLLH
Trigger: GTGCAGCAGGCGCCAATCCAACAGCATGGGAACAAC...CAAGCAAAGAGTCAGCAGCATGAAGCCCCGGAGCTGTAGCGTGTGCAGCAGGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610723.4
CDS-3UTR CAA 90 bp CCACCCTGTTCTAAGCAGGAGACTGCTTGTCCTAAGGATGGCCAGGGACCAGGCAGTTCCCCAGTGGGTTaGGAAGAGGGAAACCCTGGG +
Preference number: 5 (lower is better)
Translates to: PPCSKQETACPKDGQGPGSSPVG*EEGNPG
Trigger: CCCAGGGTTTCCCTCTTCCAAACCCACTGGGGAACT...GCCTGGTCCCTGGCCATCCTTAGGACAAGCAGTCTCCTGCTTAGAACAGGGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334295.9
CDS-3UTR CAA 90 bp TCCCTGCTCACTCCTTCTGAGGCAGGTCTTGAGCCTTTCCTTATCATAACCCCCGCTGGTGAAGGCATATaGCCACTGGGGCAGGCCCAG +
Preference number: 5 (lower is better)
Translates to: SLLTPSEAGLEPFLIITPAGEGI*PLGQAQ
Trigger: CTGGGCCTGCCCCAGTGGCAATATGCCTTCACCAGC...GGGGGTTATGATAAGGAAAGGCTCAAGACCTGCCTCAGAAGGAGTGAGCAGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334295.9
CDS-3UTR CAA 90 bp CTCTGGCTGATCATCACTGGCTTCATGTGTATCGTCCTCCAGGTCTGCCAGAGTGCTGGTGAAGGCATATaGCCACTGGGGCAGGCCCAG +
Preference number: 5 (lower is better)
Translates to: LWLIITGFMCIVLQVCQSAGEGI*PLGQAQ
Trigger: CTGGGCCTGCCCCAGTGGCAATATGCCTTCACCAGC...ACTCTGGCAGACCTGGAGGACGATACACATGAAGCCAGTGATGATCAGCCAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585635.5
ENST00000591823.5
CDS-3UTR CAA 90 bp CGTAATAGCAGCTGCCACTGGGGATGCACACTTGGAGAACAGGGGAGTGAGAATGCTGGTGAAGGCATATaGCCACTGGGGCAGGCCCAG +
Preference number: 5 (lower is better)
Translates to: RNSSCHWGCTLGEQGSENAGEGI*PLGQAQ
Trigger: CTGGGCCTGCCCCAGTGGCAATATGCCTTCACCAGC...ATTCTCACTCCCCTGTTCTCCAAGTGTGCATCCCCAGTGGCAGCTGCTATTACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000589049.5
CDS-3UTR CAA 90 bp GTTCTCTGGAGTCCCCTTGGCCAGCAGAGAGTCTGTTCACTTGGTTGGAGAGTTGCCAGTCCCCATGCCTaGGCCTGTGGGCTAATGCCA +
Preference number: 5 (lower is better)
Translates to: VLWSPLGQQRVCSLGWRVASPHA*ACGLMP
Trigger: TGGCATTAGCCCACAGGCCAAGGCATGGGGACTGGC...AACTCTCCAACCAAGTGAACAGACTCTCTGCTGGCCAAGGGGACTCCAGAGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591906.5
CDS-3UTR CAA 90 bp GATTGCGACACTGTTGTTCCCATGCTGTTGGATTGGCGCCTGCTGCACACGCTATCCCATGCTGTTGGATaGGCGCCTGCTGCACACGCT +
Preference number: 5 (lower is better)
Translates to: DCDTVVPMLLDWRLLHTLSHAVG*APAAHA
Trigger: AGCGTGTGCAGCAGGCGCCAATCCAACAGCATGGGA...TAGCGTGTGCAGCAGGCGCCAATCCAACAGCATGGGAACAACAGTGTCGCAATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000591906.5
ENST00000610723.4
CDS-3UTR CAA 90 bp CGACACTGTTGTTCCCATGCTGTTGGATTGGCGCCTGCTGCACACGCTACAGCTGTTGTTCCCATGCTGTaGGATTGGCGCCTGCTGCAC +
Preference number: 5 (lower is better)
Translates to: RHCCSHAVGLAPAAHATAVVPML*DWRLLH
Trigger: GTGCAGCAGGCGCCAATCCAACAGCATGGGAACAAC...AGCTGTAGCGTGTGCAGCAGGCGCCAATCCAACAGCATGGGAACAACAGTGTCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000591906.5
ENST00000610723.4
CDS-3UTR CAA 90 bp CCCTGGGCTTGGTTGGCACCTCGGAGTTGCAGCTGTGACACTCATAGGTTACTCGCGTCACCCCATGGCTaGTGTTGCCTGCTACGCATT +
Preference number: 5 (lower is better)
Translates to: PWAWLAPRSCSCDTHRLLASPHG*CCLLRI
Trigger: AATGCGTAGCAGGCAACACAAGCCATGGGGTGACGC...GAGTAACCTATGAGTGTCACAGCTGCAACTCCGAGGTGCCAACCAAGCCCAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590258.2
CDS TCA 90 bp ATCAAGGTGTGGTATCTCATCATCTTCACAGTCCTAGGATGCGCGTaGTGCCCAGGGTCAGCTTCTCCAGGTGCGGCTTGCTGCAGCCCA +
Preference number: 5 (lower is better)
Translates to: IKVWYLIIFTVLGCA*CPGSASPGAACCSP
Trigger: TGGGCTGCAGCAAGCCGCACCTGGAGAAGCTGACCCTGGGCATCACGCGCATCCTAGGACTGTGAAGATGATGAGATACCACACCTTGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590692.5
ENST00000591823.5
CDS-3UTR CAA 90 bp TCCACAGGCTCGCCTCTTCAGAATGGCAAAACTCTTCTCAGTGTCCTCAGAAGCGCTGGTGAAGGCATATaGCCACTGGGGCAGGCCCAG +
Preference number: 5 (lower is better)
Translates to: STGSPLQNGKTLLSVLRSAGEGI*PLGQAQ
Trigger: CTGGGCCTGCCCCAGTGGCAATATGCCTTCACCAGC...GCTTCTGAGGACACTGAGAAGAGTTTTGCCATTCTGAAGAGGCGAGCCTGTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590652.5
CDS-3UTR CAA 90 bp TCTGTGCATGGAAACCACCACTCTGGAGCTGGTAGGGAGTTGGAGGGAGGGGTGATGCTGAACCATTGCTaGGCCTGTGGGCTAATGCCA +
Preference number: 5 (lower is better)
Translates to: SVHGNHHSGAGRELEGGVMLNHC*ACGLMP
Trigger: TGGCATTAGCCCACAGGCCAAGCAATGGTTCAGCAT...CACCCCTCCCTCCAACTCCCTACCAGCTCCAGAGTGGTGGTTTCCATGCACAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334295.9
ENST00000383056.7
ENST00000593035.5
CDS-3UTR CAA 90 bp CCCCTAGGGCCATCTGTGCATGGAAACCACCACTCTGGAGCTGGTAGGGAGTTGATGCTGAACCATTGCTaGGCCTGTGGGCTAATGCCA +
Preference number: 5 (lower is better)
Translates to: PLGPSVHGNHHSGAGRELMLNHC*ACGLMP
Trigger: TGGCATTAGCCCACAGGCCAAGCAATGGTTCAGCAT...CAACTCCCTACCAGCTCCAGAGTGGTGGTTTCCATGCACAGATGGCCCTAGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334295.9
ENST00000383056.7
ENST00000593035.5
CDS-3UTR CAA 90 bp GGTTCTCTGGAGTCCCCTTGGCCAGCAGAGAGTCTGTTCACTTGGTTGGAGAGTGTTGTTCCCATGCTGTaGGATTGGCGCCTGCTGCAC +
Preference number: 5 (lower is better)
Translates to: GSLESPWPAESLFTWLESVVPML*DWRLLH
Trigger: GTGCAGCAGGCGCCAATCCAACAGCATGGGAACAAC...ACTCTCCAACCAAGTGAACAGACTCTCTGCTGGCCAAGGGGACTCCAGAGAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000590842.5
ENST00000591906.5
ENST00000610723.4
CDS-3UTR CAA 90 bp TCTCTGAACTTTGATCAACAGCCTGCCCTGGTCATCTCAGGAACTCTGGCTGATGAGCCCTGGGCTTGGTaGGCACCTCGGAGTTGCAGC +
Preference number: 5 (lower is better)
Translates to: SLNFDQQPALVISGTLADEPWAW*APRSCS
Trigger: GCTGCAACTCCGAGGTGCCAACCAAGCCCAGGGCTC...ATCAGCCAGAGTTCCTGAGATGACCAGGGCAGGCTGTTGATCAAAGTTCAGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590258.2
CDS-3UTR CAA 90 bp TTCTTCTGGGAACAGGACCTTAAACAGTTCCACAGGCTCGCCTCTTCAGAATGGGCCAGAGCCCTGGGCTaGGTTGGCACCTCGGAGTTG +
Preference number: 5 (lower is better)
Translates to: FFWEQDLKQFHRLASSEWARALG*VGTSEL
Trigger: CAACTCCGAGGTGCCAACCAAGCCCAGGGCTCTGGC...CCATTCTGAAGAGGCGAGCCTGTGGAACTGTTTAAGGTCCTGTTCCCAGAAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590258.2
CDS-3UTR CAA 90 bp GCCCTGTCCACAAATGTCAAGGAGCAGTCGGGGTGTGCCAGTGAGTCCCGGGAGACTTTCCCACTGCCATaGCATGAATCCAGCTCAAAT +
Preference number: 5 (lower is better)
Translates to: ALSTNVKEQSGCASESRETFPLP*HESSSN
Trigger: ATTTGAGCTGGATTCATGCAATGGCAGTGGGAAAGT...CTCCCGGGACTCACTGGCACACCCCGACTGCTCCTTGACATTTGTGGACAGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587129.5
CDS-3UTR CAA 90 bp ATGGTCAGAAACTCAGTTTCTAAGGTTCTCTGGAGTCCCCTTGGCCAGCAGAGAGCTGGTGAAGGCATATaGCCACTGGGGCAGGCCCAG +
Preference number: 5 (lower is better)
Translates to: MVRNSVSKVLWSPLGQQRAGEGI*PLGQAQ
Trigger: CTGGGCCTGCCCCAGTGGCAATATGCCTTCACCAGC...TCTCTGCTGGCCAAGGGGACTCCAGAGAACCTTAGAAACTGAGTTTCTGACCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000590842.5
ENST00000591906.5
CDS-3UTR CAA 90 bp GGGAACAGGACCTTAAACAGTTCCACAGGCTCGCCTCTTCAGAATGGCAAAACTGCTGGTGAAGGCATATaGCCACTGGGGCAGGCCCAG +
Preference number: 5 (lower is better)
Translates to: GNRTLNSSTGSPLQNGKTAGEGI*PLGQAQ
Trigger: CTGGGCCTGCCCCAGTGGCAATATGCCTTCACCAGC...AGTTTTGCCATTCTGAAGAGGCGAGCCTGTGGAACTGTTTAAGGTCCTGTTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000590258.2
ENST00000590652.5
ENST00000614939.4
CDS-3UTR CAA 90 bp CACACGCAAAACTGGAGGTCACCCCTAGGGCCATCTGTGCATGGAAACCACCACATGCTGAACCATTGCTaGGCCTGTGGGCTAATGCCA +
Preference number: 5 (lower is better)
Translates to: HTQNWRSPLGPSVHGNHHMLNHC*ACGLMP
Trigger: TGGCATTAGCCCACAGGCCAAGCAATGGTTCAGCAT...GTGGTGGTTTCCATGCACAGATGGCCCTAGGGGTGACCTCCAGTTTTGCGTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334295.9
ENST00000383056.7
ENST00000593035.5
CDS-3UTR CAA 90 bp ACGGTCCACACGCAAAACTGGAGGTCACCCCTAGGGCCATCTGTGCATGGAAACATTCCAAATTCCCCATaGCTTCCAGAGGCAGGGGAC +
Preference number: 5 (lower is better)
Translates to: TVHTQNWRSPLGPSVHGNIPNSP*LPEAGD
Trigger: GTCCCCTGCCTCTGGAAGCAATGGGGAATTTGGAAT...GTTTCCATGCACAGATGGCCCTAGGGGTGACCTCCAGTTTTGCGTGTGGACCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000334295.9
ENST00000383056.7
ENST00000593035.5
CDS-3UTR CAA 90 bp GGTTCTCTGGAGTCCCCTTGGCCAGCAGAGAGTCTGTTCACTTGGTTGGAGAGTCATGCTGCTGACTCTTaGCTTGTGGCCAGTCCCCAT +
Preference number: 5 (lower is better)
Translates to: GSLESPWPAESLFTWLESHAADS*LVASPH
Trigger: ATGGGGACTGGCCACAAGCAAAGAGTCAGCAGCATG...ACTCTCCAACCAAGTGAACAGACTCTCTGCTGGCCAAGGGGACTCCAGAGAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000590842.5
ENST00000591906.5
ENST00000610723.4
CDS-3UTR CAA 90 bp GATTGCGACACTGTTGTTCCCATGCTGTTGGATTGGCGCCTGCTGCACACGCTACATGCTGCTGACTCTTaGCTTGTGGCCAGTCCCCAT +
Preference number: 5 (lower is better)
Translates to: DCDTVVPMLLDWRLLHTLHAADS*LVASPH
Trigger: ATGGGGACTGGCCACAAGCAAAGAGTCAGCAGCATG...TAGCGTGTGCAGCAGGCGCCAATCCAACAGCATGGGAACAACAGTGTCGCAATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000591906.5
ENST00000610723.4
CDS-3UTR CAA 90 bp ACTCAGTTTCTAAGGTTCTCTGGAGTCCCCTTGGCCAGCAGAGAGTCTGTTCACTCCCATGCTGTTGGATaGGCGCCTGCTGCACACGCT +
Preference number: 5 (lower is better)
Translates to: TQFLRFSGVPLASRESVHSHAVG*APAAHA
Trigger: AGCGTGTGCAGCAGGCGCCAATCCAACAGCATGGGA...GTGAACAGACTCTCTGCTGGCCAAGGGGACTCCAGAGAACCTTAGAAACTGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000590842.5
ENST00000591906.5
ENST00000610723.4
CDS-3UTR CAA 90 bp GTCAGAAACTCAGTTTCTAAGGTTCTCTGGAGTCCCCTTGGCCAGCAGAGAGTCTCCCATGCTGTTGGATaGGCGCCTGCTGCACACGCT +
Preference number: 5 (lower is better)
Translates to: VRNSVSKVLWSPLGQQRVSHAVG*APAAHA
Trigger: AGCGTGTGCAGCAGGCGCCAATCCAACAGCATGGGA...GACTCTCTGCTGGCCAAGGGGACTCCAGAGAACCTTAGAAACTGAGTTTCTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000590842.5
ENST00000591906.5
ENST00000610723.4
CDS-3UTR CAA 90 bp GGGAACAGGACCTTAAACAGTTCCACAGGCTCGCCTCTTCAGAATGGCAAAACTCGCCCCGAGTGGCGGTaGTTTCAAGATGGCGGACGT +
Preference number: 5 (lower is better)
Translates to: GNRTLNSSTGSPLQNGKTRPEWR*FQDGGR
Trigger: ACGTCCGCCATCTTGAAACAACCGCCACTCGGGGCG...AGTTTTGCCATTCTGAAGAGGCGAGCCTGTGGAACTGTTTAAGGTCCTGTTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614939.4
CDS TCA 90 bp GAGGTGAGTCTATTTCTCCAACTTCTTGAGTTTGGAGTTGGCCTGTaGGTGCCTTGCCCTAGGATGCGCGTGATGCCCAGGGTCAGCTTC +
Preference number: 5 (lower is better)
Translates to: EVSLFLQLLEFGVGL*VPCPRMRVMPRVSF
Trigger: GAAGCTGACCCTGGGCATCACGCGCATCCTAGGGCAAGGCACTCACAGGCCAACTCCAAACTCAAGAAGTTGGAGAAATAGACTCACCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585635.5
CDS-3UTR CAA 90 bp GAGTCCCCTTGGCCAGCAGAGAGTCTGTTCACTTGGTTGGAGAGTTTTATTTGTGCTGGTGAAGGCATATaGCCACTGGGGCAGGCCCAG +
Preference number: 5 (lower is better)
Translates to: ESPWPAESLFTWLESFICAGEGI*PLGQAQ
Trigger: CTGGGCCTGCCCCAGTGGCAATATGCCTTCACCAGC...ACAAATAAAACTCTCCAACCAAGTGAACAGACTCTCTGCTGGCCAAGGGGACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000590842.5
ENST00000591906.5
CDS-3UTR CAA 90 bp GGACTGCTCTTAGTTCCCCAGTGGGTTTGGAAGAGGGAAACCCTGGGTCGATTACCTCCGCTGCTTCACTaGTGGAATCCAGGGCTGATT +
Preference number: 5 (lower is better)
Translates to: GLLLVPQWVWKRETLGRLPPLLH*WNPGLI
Trigger: AATCAGCCCTGGATTCCACAAGTGAAGCAGCGGAGG...TAATCGACCCAGGGTTTCCCTCTTCCAAACCCACTGGGGAACTAAGAGCAGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334295.9
CDS-3UTR CAA 90 bp AGTCTGGAGGCCAAGGGATCAGGGGTGGGGGAAAGAGGAGCTAGTGCAAGAACAGCATGTCCCCAGCTATaGTTGGTCGTCTGTTGGATT +
Preference number: 5 (lower is better)
Translates to: SLEAKGSGVGERGASARTACPQL*LVVCWI
Trigger: AATCCAACAGACGACCAACAATAGCTGGGGACATGC...TGTTCTTGCACTAGCTCCTCTTTCCCCCACCCCTGATCCCTTGGCCTCCAGACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000590258.2
CDS-3UTR CAA 90 bp TTCTTCTGGGAACAGGACCTTAAACAGTTCCACAGGCTCGCCTCTTCAGAATGGCGGCCTTCAGATCCTTaGGGGGAGACAGGGAGCTTG +
Preference number: 5 (lower is better)
Translates to: FFWEQDLKQFHRLASSEWRPSDP*GETGSL
Trigger: CAAGCTCCCTGTCTCCCCCAAAGGATCTGAAGGCCG...CCATTCTGAAGAGGCGAGCCTGTGGAACTGTTTAAGGTCCTGTTCCCAGAAGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000590652.5
CDS-3UTR CAA 90 bp GGGGAAAGCTCAGAACCTGCACAGCCCACTCTGCAGCTAAAATGGGTAGCAGCAGCTGCCTTGGGGTCTTaGACTATCACATGGGGAAAG +
Preference number: 5 (lower is better)
Translates to: GESSEPAQPTLQLKWVAAAALGS*TITWGK
Trigger: CTTTCCCCATGTGATAGTCAAAGACCCCAAGGCAGC...TGCTGCTACCCATTTTAGCTGCAGAGTGGGCTGTGCAGGTTCTGAGCTTTCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000587382.5
CDS-3UTR CAA 90 bp TCAGGGCCCAAAGGTAGGCTTGGAAATACAGTAGTTGCAGTAACACGATTTGAGGCTGGTGAAGGCATATaGCCACTGGGGCAGGCCCAG +
Preference number: 5 (lower is better)
Translates to: SGPKGRLGNTVVAVTRFEAGEGI*PLGQAQ
Trigger: CTGGGCCTGCCCCAGTGGCAATATGCCTTCACCAGC...CTCAAATCGTGTTACTGCAACTACTGTATTTCCAAGCCTACCTTTGGGCCCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590258.2
CDS-3UTR CAA 90 bp ACGGTCCACACGCAAAACTGGAGGTCACCCCTAGGGCCATCTGTGCATGGAAACATACATGCTGAACCATaGCTTGGCCTGTGGGCTAAT +
Preference number: 5 (lower is better)
Translates to: TVHTQNWRSPLGPSVHGNIHAEP*LGLWAN
Trigger: ATTAGCCCACAGGCCAAGCAATGGTTCAGCATGTAT...GTTTCCATGCACAGATGGCCCTAGGGGTGACCTCCAGTTTTGCGTGTGGACCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334295.9
ENST00000383056.7
ENST00000593035.5
CDS-3UTR CAA 90 bp CCACCCTGTTCTAAGCAGGAGACTGCTTGTCCTAAGGATGGCCAGGGACCAGGCAAACCAGTGGTTTCTTaGGGGGACCTCTCTAATCAA +
Preference number: 5 (lower is better)
Translates to: PPCSKQETACPKDGQGPGKPVVS*GDLSNQ
Trigger: TTGATTAGAGAGGTCCCCCAAAGAAACCACTGGTTT...GCCTGGTCCCTGGCCATCCTTAGGACAAGCAGTCTCCTGCTTAGAACAGGGTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334295.9
CDS-3UTR CAA 90 bp TTGAGTGACACCGCTGACCTCCTGGTTCCTCCGCTGCTTCACTTGTGGAATCCATTGATTGCCACAGATTaGAGTGACACCGCTGACCTC +
Preference number: 5 (lower is better)
Translates to: LSDTADLLVPPLLHLWNPLIATD*SDTADL
Trigger: GAGGTCAGCGGTGTCACTCAAATCTGTGGCAATCAA...TGGATTCCACAAGTGAAGCAGCGGAGGAACCAGGAGGTCAGCGGTGTCACTCAA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334295.9
CDS-3UTR CAA 90 bp CAGGACCTTAAACAGTTCCACAGGCTCGCCTCTTCAGAATGGCAAAACTCTTCTCGGCCTTCAGATCCTTaGGGCTTGGCCTGTGGGCTA +
Preference number: 5 (lower is better)
Translates to: QDLKQFHRLASSEWQNSSRPSDP*GLACGL
Trigger: TAGCCCACAGGCCAAGCCCAAAGGATCTGAAGGCCG...AGAAGAGTTTTGCCATTCTGAAGAGGCGAGCCTGTGGAACTGTTTAAGGTCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590258.2
ENST00000614939.4
CDS-3UTR CAA 90 bp TGGGAACAGGACCTTAAACAGTTCCACAGGCTCGCCTCTTCAGAATGGCAAAACCAGAAGCACCCTCGCTaGGAACGGCCTTCAGATCCT +
Preference number: 5 (lower is better)
Translates to: WEQDLKQFHRLASSEWQNQKHPR*ERPSDP
Trigger: AGGATCTGAAGGCCGTTCCAAGCGAGGGTGCTTCTG...GTTTTGCCATTCTGAAGAGGCGAGCCTGTGGAACTGTTTAAGGTCCTGTTCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000590258.2
ENST00000590652.5
ENST00000614939.4
CDS-3UTR CAA 90 bp GGGAACAGGACCTTAAACAGTTCCACAGGCTCGCCTCTTCAGAATGGCAAAACTCAGAAGCACCCTCGCTaGGAACGGCCTTCAGATCCT +
Preference number: 5 (lower is better)
Translates to: GNRTLNSSTGSPLQNGKTQKHPR*ERPSDP
Trigger: AGGATCTGAAGGCCGTTCCAAGCGAGGGTGCTTCTG...AGTTTTGCCATTCTGAAGAGGCGAGCCTGTGGAACTGTTTAAGGTCCTGTTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000590258.2
ENST00000590652.5
ENST00000614939.4
CDS-3UTR CAA 90 bp GCCCAGGTGGGTGATGAGCAGGCGGTAATAGGCAGTAAAGGTGTCTGTGAGAAATTCTTGAGTTTGGAGTaGGCCTGTGAGTGCCTTGCC +
Preference number: 5 (lower is better)
Translates to: AQVGDEQAVIGSKGVCEKFLSLE*ACECLA
Trigger: GGCAAGGCACTCACAGGCCAACTCCAAACTCAAGAA...TTTCTCACAGACACCTTTACTGCCTATTACCGCCTGCTCATCACCCACCTGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585635.5
CDS-3UTR CAA 90 bp GCCCTGTCCACAAATGTCAAGGAGCAGTCGGGGTGTGCCAGTGAGTCCCGGGAGCACACAGTTATTCTTTaGTTCCCAGGAAGAAATCAT +
Preference number: 5 (lower is better)
Translates to: ALSTNVKEQSGCASESREHTVIL*FPGRNH
Trigger: ATGATTTCTTCCTGGGAACAAAAGAATAACTGTGTG...CTCCCGGGACTCACTGGCACACCCCGACTGCTCCTTGACATTTGTGGACAGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587129.5
CDS-3UTR CAA 90 bp AGAAAGAGGCCTACGGTCCACACGCAAAACTGGAGGTCACCCCTAGGGCCATCTACTTTCCCACTGCCATaGCATGAATCCAGCTCAAAT +
Preference number: 5 (lower is better)
Translates to: RKRPTVHTQNWRSPLGPSTFPLP*HESSSN
Trigger: ATTTGAGCTGGATTCATGCAATGGCAGTGGGAAAGT...AGATGGCCCTAGGGGTGACCTCCAGTTTTGCGTGTGGACCGTAGGCCTCTTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334295.9
ENST00000383056.7
ENST00000593035.5
CDS-3UTR CAA 90 bp CACACGCAAAACTGGAGGTCACCCCTAGGGCCATCTGTGCATGGAAACCACCACACTTTCCCACTGCCATaGCATGAATCCAGCTCAAAT +
Preference number: 5 (lower is better)
Translates to: HTQNWRSPLGPSVHGNHHTFPLP*HESSSN
Trigger: ATTTGAGCTGGATTCATGCAATGGCAGTGGGAAAGT...GTGGTGGTTTCCATGCACAGATGGCCCTAGGGGTGACCTCCAGTTTTGCGTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334295.9
ENST00000383056.7
ENST00000593035.5
CDS-3UTR CAA 90 bp CATGTGGAAGCCATTGGTCATCAGGTAAAAGTTCTTCACATCTTCAGGCATCACGCTGGTGAAGGCATATaGCCACTGGGGCAGGCCCAG +
Preference number: 5 (lower is better)
Translates to: HVEAIGHQVKVLHIFRHHAGEGI*PLGQAQ
Trigger: CTGGGCCTGCCCCAGTGGCAATATGCCTTCACCAGC...GTGATGCCTGAAGATGTGAAGAACTTTTACCTGATGACCAATGGCTTCCACATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000585635.5
ENST00000591823.5
CDS-3UTR CAA 90 bp CCCCTAGGGCCATCTGTGCATGGAAACCACCACTCTGGAGCTGGTAGGGAGTTGAGCACTCAGACTTATTaGGGCACTTACACAAGATTC +
Preference number: 5 (lower is better)
Translates to: PLGPSVHGNHHSGAGRELSTQTY*GTYTRF
Trigger: GAATCTTGTGTAAGTGCCCAAATAAGTCTGAGTGCT...CAACTCCCTACCAGCTCCAGAGTGGTGGTTTCCATGCACAGATGGCCCTAGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334295.9
ENST00000383056.7
ENST00000593035.5
CDS-3UTR CAA 90 bp ACGGTCCACACGCAAAACTGGAGGTCACCCCTAGGGCCATCTGTGCATGGAAACAAACCAGTGGTTTCTTaGGGGGACCTCTCTAATCAA +
Preference number: 5 (lower is better)
Translates to: TVHTQNWRSPLGPSVHGNKPVVS*GDLSNQ
Trigger: TTGATTAGAGAGGTCCCCCAAAGAAACCACTGGTTT...GTTTCCATGCACAGATGGCCCTAGGGGTGACCTCCAGTTTTGCGTGTGGACCGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000334295.9
ENST00000383056.7
ENST00000593035.5
CDS-3UTR CAA 90 bp TGCTTCATGGGTCAAAACCAGTGGTTTCTTTGGGGGACCTCTCTAATCAATCAGTCCCCACTTTCCCTGTaGGGAAGCAGGGTGAAGGCC +
Preference number: 5 (lower is better)
Translates to: CFMGQNQWFLWGTSLINQSPLSL*GSRVKA
Trigger: GGCCTTCACCCTGCTTCCCAACAGGGAAAGTGGGGA...CTGATTGATTAGAGAGGTCCCCCAAAGAAACCACTGGTTTTGACCCATGAAGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000334295.9
CDS-3UTR CAA 90 bp TGGGAACAGGACCTTAAACAGTTCCACAGGCTCGCCTCTTCAGAATGGCAAAACTCAGATCCTTTGGGCTaGGCCTGTGGGCTAATGCCA +
Preference number: 5 (lower is better)
Translates to: WEQDLKQFHRLASSEWQNSDPLG*ACGLMP
Trigger: TGGCATTAGCCCACAGGCCAAGCCCAAAGGATCTGA...GTTTTGCCATTCTGAAGAGGCGAGCCTGTGGAACTGTTTAAGGTCCTGTTCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590258.2
ENST00000614939.4
CDS-3UTR CAA 90 bp CAGGACCTTAAACAGTTCCACAGGCTCGCCTCTTCAGAATGGCAAAACTCTTCTCAGAAGCACCCTCGCTaGGAACGGCCTTCAGATCCT +
Preference number: 5 (lower is better)
Translates to: QDLKQFHRLASSEWQNSSQKHPR*ERPSDP
Trigger: AGGATCTGAAGGCCGTTCCAAGCGAGGGTGCTTCTG...AGAAGAGTTTTGCCATTCTGAAGAGGCGAGCCTGTGGAACTGTTTAAGGTCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000590258.2
ENST00000590652.5
ENST00000614939.4
CDS-3UTR CAA 90 bp TCAGGGCCCAAAGGTAGGCTTGGAAATACAGTAGTTGCAGTAACACGATTTGAGCCTCACTGCTGCCCCTaGCCCTGGCTTCATGCACTT +
Preference number: 5 (lower is better)
Translates to: SGPKGRLGNTVVAVTRFEPHCCP*PWLHAL
Trigger: AAGTGCATGAAGCCAGGGCAAGGGGCAGCAGTGAGG...CTCAAATCGTGTTACTGCAACTACTGTATTTCCAAGCCTACCTTTGGGCCCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590258.2
CDS-3UTR CAA 90 bp GTTGGGTCTTGTGGAACCCCTCGCTGTGCACTGGTTGCCTCACCTCATTTGTATTACTCATGGAGAGATTaGTCCTCACTGCTGCCCCTT +
Preference number: 5 (lower is better)
Translates to: VGSCGTPRCALVASPHLYYSWRD*SSLLPL
Trigger: AAGGGGCAGCAGTGAGGACAAATCTCTCCATGAGTA...ATACAAATGAGGTGAGGCAACCAGTGCACAGCGAGGGGTTCCACAAGACCCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590258.2
CDS-3UTR CAA 90 bp CATGATGGATGTGAACACCCCAGGAGAGCCTGGAACTTGCGAGAGTTGGGTCTGTTGTGTTTAATCACCTaGGCCTGTGGGCTAATGCCA +
Preference number: 5 (lower is better)
Translates to: HDGCEHPRRAWNLRELGLLCLIT*ACGLMP
Trigger: TGGCATTAGCCCACAGGCCAAGGTGATTAAACACAA...CAGACCCAACTCTCGCAAGTTCCAGGCTCTCCTGGGGTGTTCACATCCATCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590652.5
CDS-3UTR CAA 90 bp ATGCAGGTTCCTGGGCCCCACCCTAGATCTCCTGAATCAGATAGGGAAGTTGGGACTTTCCCACTGCCATaGCATGAATCCAGCTCAAAT +
Preference number: 5 (lower is better)
Translates to: MQVPGPHPRSPESDREVGTFPLP*HESSSN
Trigger: ATTTGAGCTGGATTCATGCAATGGCAGTGGGAAAGT...CCCAACTTCCCTATCTGATTCAGGAGATCTAGGGTGGGGCCCAGGAACCTGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589049.5
CDS-3UTR CAA 90 bp GGACTGCTCTTAGTTCCCCAGTGGGTTTGGAAGAGGGAAACCCTGGGTCGATTAATACATGCTGAACCATaGCTTGGCCTGTGGGCTAAT +
Preference number: 5 (lower is better)
Translates to: GLLLVPQWVWKRETLGRLIHAEP*LGLWAN
Trigger: ATTAGCCCACAGGCCAAGCAATGGTTCAGCATGTAT...TAATCGACCCAGGGTTTCCCTCTTCCAAACCCACTGGGGAACTAAGAGCAGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334295.9
CDS-3UTR CAA 90 bp CACACGCAAAACTGGAGGTCACCCCTAGGGCCATCTGTGCATGGAAACCACCACCAGGCCCTTTCTTTTTaGGGATTACGATCTTGTTCT +
Preference number: 5 (lower is better)
Translates to: HTQNWRSPLGPSVHGNHHQALSF*GLRSCS
Trigger: AGAACAAGATCGTAATCCCAAAAAAGAAAGGGCCTG...GTGGTGGTTTCCATGCACAGATGGCCCTAGGGGTGACCTCCAGTTTTGCGTGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000334295.9
ENST00000383056.7
ENST00000593035.5
CDS-3UTR CAA 90 bp AAATTCCCCATTGCTTCCAGAGGCAGGGGACAGCACAACCTGCTCTGGAGGCCTAGCACTCAGACTTATTaGGGCACTTACACAAGATTC +
Preference number: 5 (lower is better)
Translates to: KFPIASRGRGQHNLLWRPSTQTY*GTYTRF
Trigger: GAATCTTGTGTAAGTGCCCAAATAAGTCTGAGTGCT...AGGCCTCCAGAGCAGGTTGTGCTGTCCCCTGCCTCTGGAAGCAATGGGGAATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334295.9
ENST00000383056.7
ENST00000593035.5
CDS-3UTR CAA 90 bp ACGGTCCACACGCAAAACTGGAGGTCACCCCTAGGGCCATCTGTGCATGGAAACCACAGCCATAACAAGTaGAGAAAGACACTATGGAAG +
Preference number: 5 (lower is better)
Translates to: TVHTQNWRSPLGPSVHGNHSHNK*RKTLWK
Trigger: CTTCCATAGTGTCTTTCTCAACTTGTTATGGCTGTG...GTTTCCATGCACAGATGGCCCTAGGGGTGACCTCCAGTTTTGCGTGTGGACCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334295.9
CDS-3UTR CAA 90 bp TTCTTCTGGGAACAGGACCTTAAACAGTTCCACAGGCTCGCCTCTTCAGAATGGGTTGCCTGCTACGCATaGACTTGGATCTCCAGGAGT +
Preference number: 5 (lower is better)
Translates to: FFWEQDLKQFHRLASSEWVACYA*TWISRS
Trigger: ACTCCTGGAGATCCAAGTCAATGCGTAGCAGGCAAC...CCATTCTGAAGAGGCGAGCCTGTGGAACTGTTTAAGGTCCTGTTCCCAGAAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590258.2
CDS-3UTR CAA 90 bp GTTCCTGGGCCCCACCCTAGATCTCCTGAATCAGATAGGGAAGTTGGGAACCTGCATCTGTCTTGCTTATaGAAAATGCAGGTTCCTGGG +
Preference number: 5 (lower is better)
Translates to: VPGPHPRSPESDREVGNLHLSCL*KMQVPG
Trigger: CCCAGGAACCTGCATTTTCAATAAGCAAGACAGATG...CAGGTTCCCAACTTCCCTATCTGATTCAGGAGATCTAGGGTGGGGCCCAGGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589049.5
CDS-3UTR CAA 90 bp AGGACCTTAAACAGTTCCACAGGCTCGCCTCTTCAGAATGGCAAAACTCTTCTCAGGAGAGCCTGGAACTaGCGAGAGTTGGGTCTGTAC +
Preference number: 5 (lower is better)
Translates to: RTLNSSTGSPLQNGKTLLRRAWN*RELGLY
Trigger: GTACAGACCCAACTCTCGCAAGTTCCAGGCTCTCCT...GAGAAGAGTTTTGCCATTCTGAAGAGGCGAGCCTGTGGAACTGTTTAAGGTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590652.5
CDS TCA 90 bp GTTCCCAGGAAGAAATCATATGACGTTCAGCAGGAGGCTTTTCTATaGTGGTCACCTCAGTCACACCTGGGGAAGATTCTAGGATGCGCG +
Preference number: 5 (lower is better)
Translates to: VPRKKSYDVQQEAFL*WSPQSHLGKILGCA
Trigger: CGCGCATCCTAGAATCTTCCCCAGGTGTGACTGAGGTGACCATCATAGAAAAGCCTCCTGCTGAACGTCATATGATTTCTTCCTGGGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000334295.9
ENST00000383056.7
ENST00000587129.5
ENST00000587207.1
ENST00000587382.5
ENST00000587511.1
ENST00000589049.5
ENST00000590337.5
ENST00000590842.5
ENST00000591648.1
ENST00000593035.5
ENST00000610723.4
ENST00000614939.4
CDS TCA 90 bp CCCATTCAATCTCTCAGCCAGGGAAATGTTCTCCTACAAGGAGGCTaGCTCACCATCCAGCTTCACACTCCATGTCATGTGGAAGCCATT +
Preference number: 5 (lower is better)
Translates to: PIQSLSQGNVLLQGG*LTIQLHTPCHVEAI
Trigger: AATGGCTTCCACATGACATGGAGTGTGAAGCTGGATGGTGAGTCAGCCTCCTTGTAGGAGAACATTTCCCTGGCTGAGAGATTGAATGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587511.1
CDS-3UTR CAA 90 bp CTGGCTAATGTCGGTGGGACTAAAAGCCTTACAATTTTGGTCATTCAACTAGAAGCTGGTGAAGGCATATaGCCACTGGGGCAGGCCCAG +
Preference number: 5 (lower is better)
Translates to: LANVGGTKSLTILVIQLEAGEGI*PLGQAQ
Trigger: CTGGGCCTGCCCCAGTGGCAATATGCCTTCACCAGC...TTCTAGTTGAATGACCAAAATTGTAAGGCTTTTAGTCCCACCGACATTAGCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000334295.9
ENST00000383056.7
ENST00000593035.5
CDS-3UTR CAA 90 bp CACACGCAAAACTGGAGGTCACCCCTAGGGCCATCTGTGCATGGAAACCACCACTTGCTCTTAAACACTTaGCTGGGATCTAGCTTATTC +
Preference number: 5 (lower is better)
Translates to: HTQNWRSPLGPSVHGNHHLLLNT*LGSSLF
Trigger: GAATAAGCTAGATCCCAGCAAAGTGTTTAAGAGCAA...GTGGTGGTTTCCATGCACAGATGGCCCTAGGGGTGACCTCCAGTTTTGCGTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334295.9
ENST00000383056.7
ENST00000593035.5
CDS-3UTR CAA 90 bp CCACCCTGTTCTAAGCAGGAGACTGCTTGTCCTAAGGATGGCCAGGGACCAGGCATTACGATCTTGTTCTaGCTCTTAAACACTTTGCTG +
Preference number: 5 (lower is better)
Translates to: PPCSKQETACPKDGQGPGITILF*LLNTLL
Trigger: CAGCAAAGTGTTTAAGAGCAAGAACAAGATCGTAAT...GCCTGGTCCCTGGCCATCCTTAGGACAAGCAGTCTCCTGCTTAGAACAGGGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334295.9
CDS-3UTR CAA 90 bp GGTCATTCAACTAGAAAGAGGCCTACGGTCCACACGCAAAACTGGAGGTCACCCCCGTTGGCTCTTCCTTaGATCAATTCTGGCAAGAAA +
Preference number: 5 (lower is better)
Translates to: GHSTRKRPTVHTQNWRSPPLALP*INSGKK
Trigger: TTTCTTGCCAGAATTGATCAAAGGAAGAGCCAACGG...GGGTGACCTCCAGTTTTGCGTGTGGACCGTAGGCCTCTTTCTAGTTGAATGACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334295.9
CDS-3UTR CAA 90 bp CCCCTTGGCCAGCAGAGAGTCTGTTCACTTGGTTGGAGAGTTTTATTTGTAGTTCATGCTGCTGACTCTTaGCTTGTGGCCAGTCCCCAT +
Preference number: 5 (lower is better)
Translates to: PLGQQRVCSLGWRVLFVVHAADS*LVASPH
Trigger: ATGGGGACTGGCCACAAGCAAAGAGTCAGCAGCATG...AACTACAAATAAAACTCTCCAACCAAGTGAACAGACTCTCTGCTGGCCAAGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000590842.5
ENST00000591906.5
ENST00000610723.4
CDS-3UTR CAA 90 bp TTAAACAGTTCCACAGGCTCGCCTCTTCAGAATGGCAAAACTCTTCTCAGTGTCTCAGATCCTTTGGGCTaGGCCTGTGGGCTAATGCCA +
Preference number: 5 (lower is better)
Translates to: LNSSTGSPLQNGKTLLSVSDPLG*ACGLMP
Trigger: TGGCATTAGCCCACAGGCCAAGCCCAAAGGATCTGA...GACACTGAGAAGAGTTTTGCCATTCTGAAGAGGCGAGCCTGTGGAACTGTTTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590258.2
ENST00000614939.4
CDS-3UTR CAA 90 bp CTTGGAAATACAGTAGTTGCAGTAACACGATTTGAGAGAACCCCTCACCACATACGGCCTTCAGATCCTTaGGGCTTGGCCTGTGGGCTA +
Preference number: 5 (lower is better)
Translates to: LGNTVVAVTRFERTPHHIRPSDP*GLACGL
Trigger: TAGCCCACAGGCCAAGCCCAAAGGATCTGAAGGCCG...TATGTGGTGAGGGGTTCTCTCAAATCGTGTTACTGCAACTACTGTATTTCCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590258.2
CDS-3UTR CAA 90 bp TCAGGGCCCAAAGGTAGGCTTGGAAATACAGTAGTTGCAGTAACACGATTTGAGGCAGAAGGCAAGCTCTaGCTGGATGAAACCCCTCCA +
Preference number: 5 (lower is better)
Translates to: SGPKGRLGNTVVAVTRFEAEGKL*LDETPP
Trigger: TGGAGGGGTTTCATCCAGCAAGAGCTTGCCTTCTGC...CTCAAATCGTGTTACTGCAACTACTGTATTTCCAAGCCTACCTTTGGGCCCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590258.2
CDS-3UTR CAA 90 bp AGGACCTTAAACAGTTCCACAGGCTCGCCTCTTCAGAATGGCAAAACTCTTCTCTTTCTTCTCATCCCTTaGGGTGTGACCTGCACCACC +
Preference number: 5 (lower is better)
Translates to: RTLNSSTGSPLQNGKTLLFLLIP*GVTCTT
Trigger: GGTGGTGCAGGTCACACCCAAAGGGATGAGAAGAAA...GAGAAGAGTTTTGCCATTCTGAAGAGGCGAGCCTGTGGAACTGTTTAAGGTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590258.2
CDS-3UTR CAA 90 bp TATTGTTGGTCGTCTGTTGGATTTGTGAGGTTGTTGGGTCTTGTGGAACCCCTCGGATTTGTGAGGTTGTaGGGTCTTGTGGAACCCCTC +
Preference number: 5 (lower is better)
Translates to: YCWSSVGFVRLLGLVEPLGFVRL*GLVEPL
Trigger: GAGGGGTTCCACAAGACCCAACAACCTCACAAATCC...GAGGGGTTCCACAAGACCCAACAACCTCACAAATCCAACAGACGACCAACAATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590258.2
CDS-3UTR CAA 90 bp CCCTGGGCTTGGTTGGCACCTCGGAGTTGCAGCTGTGACACTCATAGGTTACTCGCCAAACATTTTGTCTaGTTGAGCCAAACATTCAGT +
Preference number: 5 (lower is better)
Translates to: PWAWLAPRSCSCDTHRLLAKHFV*LSQTFS
Trigger: ACTGAATGTTTGGCTCAACAAGACAAAATGTTTGGC...GAGTAACCTATGAGTGTCACAGCTGCAACTCCGAGGTGCCAACCAAGCCCAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590258.2
CDS-3UTR CAA 90 bp CTGCCACCATGTAAGATGTGCCTTTCGCCTTCTGCCGTGATTGTGAGGCCTCTCGAGTCTTGGGAATTCTaGTCCACAAAGGAGAATTCT +
Preference number: 5 (lower is better)
Translates to: LPPCKMCLSPSAVIVRPLESWEF*STKENS
Trigger: AGAATTCTCCTTTGTGGACAAGAATTCCCAAGACTC...GAGAGGCCTCACAATCACGGCAGAAGGCGAAAGGCACATCTTACATGGTGGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587382.5
CDS GCA 90 bp TGCCGTGGATTAAAACTCTCTGTGGTAGCTTACTCCAAAGGTGGGTaGTGTCAATTCCTTCCTTCCCTGCATGCCCATAGCACTTCTCAT +
Preference number: 5 (lower is better)
Translates to: CRGLKLSVVAYSKGG*CQFLPSLHAHSTSH
Trigger: ATGAGAAGTGCTATGGGCATGCAGGGAAGGAAGGAATTGACAGCACCCACCTTTGGAGTAAGCTACCACAGAGAGTTTTAATCCACGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585635.5
CDS CCA 90 bp ATCCAGCTCAAATATCACACTGCGAGAGTCAAAGTGAGGCTTCTCTaGCTGATCATCACTGGCATCCAGCTTCACACTCCATGTCATGTG +
Preference number: 5 (lower is better)
Translates to: IQLKYHTARVKVRLL*LIITGIQLHTPCHV
Trigger: CACATGACATGGAGTGTGAAGCTGGATGCCAGTGATGATCAGCCAGAGAAGCCTCACTTTGACTCTCGCAGTGTGATATTTGAGCTGGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383056.7
ENST00000590500.5
CDS-3UTR CAA 90 bp AAATTCCCCATTGCTTCCAGAGGCAGGGGACAGCACAACCTGCTCTGGAGGCCTCACACAGTTATTCTTTaGTTCCCAGGAAGAAATCAT +
Preference number: 5 (lower is better)
Translates to: KFPIASRGRGQHNLLWRPHTVIL*FPGRNH
Trigger: ATGATTTCTTCCTGGGAACAAAAGAATAACTGTGTG...AGGCCTCCAGAGCAGGTTGTGCTGTCCCCTGCCTCTGGAAGCAATGGGGAATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334295.9
ENST00000383056.7
ENST00000593035.5
CDS-3UTR CAA 90 bp GTTTCTAAGGTTCTCTGGAGTCCCCTTGGCCAGCAGAGAGTCTGTTCACTTGGTACTTTCCCACTGCCATaGCATGAATCCAGCTCAAAT +
Preference number: 5 (lower is better)
Translates to: VSKVLWSPLGQQRVCSLGTFPLP*HESSSN
Trigger: ATTTGAGCTGGATTCATGCAATGGCAGTGGGAAAGT...ACCAAGTGAACAGACTCTCTGCTGGCCAAGGGGACTCCAGAGAACCTTAGAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590842.5
ENST00000591906.5
CDS-3UTR CAA 90 bp TCTGAAAATTATAATATAAAACAAGCCGTGCTTGCTCTAACTAAGGCTGCCTGGGCTGGTGAAGGCATATaGCCACTGGGGCAGGCCCAG +
Preference number: 5 (lower is better)
Translates to: SENYNIKQAVLALTKAAWAGEGI*PLGQAQ
Trigger: CTGGGCCTGCCCCAGTGGCAATATGCCTTCACCAGC...CCAGGCAGCCTTAGTTAGAGCAAGCACGGCTTGTTTTATATTATAATTTTCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000587382.5
CDS-3UTR CAA 90 bp ACGGTCCACACGCAAAACTGGAGGTCACCCCTAGGGCCATCTGTGCATGGAAACTTTGGGATTACGATCTaGTTCTTGCTCTTAAACACT +
Preference number: 5 (lower is better)
Translates to: TVHTQNWRSPLGPSVHGNFGITI*FLLLNT
Trigger: AGTGTTTAAGAGCAAGAACAAGATCGTAATCCCAAA...GTTTCCATGCACAGATGGCCCTAGGGGTGACCTCCAGTTTTGCGTGTGGACCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334295.9
ENST00000383056.7
ENST00000593035.5
CDS-3UTR CAA 90 bp GGTCATTCAACTAGAAAGAGGCCTACGGTCCACACGCAAAACTGGAGGTCACCCCAGGCCCTTTCTTTTTaGGGATTACGATCTTGTTCT +
Preference number: 5 (lower is better)
Translates to: GHSTRKRPTVHTQNWRSPQALSF*GLRSCS
Trigger: AGAACAAGATCGTAATCCCAAAAAAGAAAGGGCCTG...GGGTGACCTCCAGTTTTGCGTGTGGACCGTAGGCCTCTTTCTAGTTGAATGACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000334295.9
ENST00000383056.7
ENST00000593035.5
CDS-3UTR CAA 90 bp TGCTTCATGGGTCAAAACCAGTGGTTTCTTTGGGGGACCTCTCTAATCAATCAGATTCCAAATTCCCCATaGCTTCCAGAGGCAGGGGAC +
Preference number: 5 (lower is better)
Translates to: CFMGQNQWFLWGTSLINQIPNSP*LPEAGD
Trigger: GTCCCCTGCCTCTGGAAGCAATGGGGAATTTGGAAT...CTGATTGATTAGAGAGGTCCCCCAAAGAAACCACTGGTTTTGACCCATGAAGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000334295.9
ENST00000383056.7
ENST00000593035.5
CDS-3UTR CAA 90 bp ACTCAGTTTCTAAGGTTCTCTGGAGTCCCCTTGGCCAGCAGAGAGTCTGTTCACATGATTGCGACACTGTaGTTCCCATGCTGTTGGATT +
Preference number: 5 (lower is better)
Translates to: TQFLRFSGVPLASRESVHMIATL*FPCCWI
Trigger: AATCCAACAGCATGGGAACAACAGTGTCGCAATCAT...GTGAACAGACTCTCTGCTGGCCAAGGGGACTCCAGAGAACCTTAGAAACTGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000590842.5
ENST00000591906.5
ENST00000610723.4
CDS-3UTR CAA 90 bp TTATTCTTCTGGGAACAGGACCTTAAACAGTTCCACAGGCTCGCCTCTTCAGAATGTAGCCCCAAACTTTaGTCCTGGCAGACAGACTGC +
Preference number: 5 (lower is better)
Translates to: LFFWEQDLKQFHRLASSECSPKL*SWQTDC
Trigger: GCAGTCTGTCTGCCAGGACAAAAGTTTGGGGCTACA...TTCTGAAGAGGCGAGCCTGTGGAACTGTTTAAGGTCCTGTTCCCAGAAGAATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590258.2
CDS-3UTR CAA 90 bp CTTGAGCATGTCCCCAGCTATTGTTGGTCGTCTGTTGGATTTGTGAGGTTGTTGCTCGCTGTGCACTGGTaGCCTCACCTCATTTGTATT +
Preference number: 5 (lower is better)
Translates to: LEHVPSYCWSSVGFVRLLLAVHW*PHLICI
Trigger: AATACAAATGAGGTGAGGCAACCAGTGCACAGCGAG...CAACAACCTCACAAATCCAACAGACGACCAACAATAGCTGGGGACATGCTCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590258.2
CDS-3UTR CAA 90 bp AGGACCTTAAACAGTTCCACAGGCTCGCCTCTTCAGAATGGCAAAACTCTTCTCGTTGGATTTGTGAGGTaGTTGGGTCTTGTGGAACCC +
Preference number: 5 (lower is better)
Translates to: RTLNSSTGSPLQNGKTLLVGFVR*LGLVEP
Trigger: GGGTTCCACAAGACCCAACAACCTCACAAATCCAAC...GAGAAGAGTTTTGCCATTCTGAAGAGGCGAGCCTGTGGAACTGTTTAAGGTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590258.2
CDS-3UTR CAA 90 bp GACCTTAAACAGTTCCACAGGCTCGCCTCTTCAGAATGGCAAAACTCTTCTCAGCCAGCCAGAATAAGTTaGGCAGTTTGCTCCTTAGCC +
Preference number: 5 (lower is better)
Translates to: DLKQFHRLASSEWQNSSQPARIS*AVCSLA
Trigger: GGCTAAGGAGCAAACTGCCAAACTTATTCTGGCTGG...CTGAGAAGAGTTTTGCCATTCTGAAGAGGCGAGCCTGTGGAACTGTTTAAGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590258.2
CDS-3UTR CAA 90 bp CTCCTGAATCAGATAGGGAAGTTGGGAACCTGCAATGTAACCATTTCCTCAGTATGTTCCTCCCTTACCTaGGCCTGTGGGCTAATGCCA +
Preference number: 5 (lower is better)
Translates to: LLNQIGKLGTCNVTISSVCSSLT*ACGLMP
Trigger: TGGCATTAGCCCACAGGCCAAGGTAAGGGAGGAACA...TACTGAGGAAATGGTTACATTGCAGGTTCCCAACTTCCCTATCTGATTCAGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589049.5
CDS-3UTR CAA 90 bp CTTAAACAGTTCCACAGGCTCGCCTCTTCAGAATGGCAAAACTCTTCTCAGTGTGGGGAGACAGGGAGCTaGTTGAAGCAGACATTTGTC +
Preference number: 5 (lower is better)
Translates to: LKQFHRLASSEWQNSSQCGETGS*LKQTFV
Trigger: GACAAATGTCTGCTTCAACAAGCTCCCTGTCTCCCC...ACACTGAGAAGAGTTTTGCCATTCTGAAGAGGCGAGCCTGTGGAACTGTTTAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590652.5
CDS-3UTR CAA 90 bp CTGCCACCATGTAAGATGTGCCTTTCGCCTTCTGCCGTGATTGTGAGGCCTCTCTACCCAAATCTCATCTaGAATTGTGGCTCCCATAAT +
Preference number: 5 (lower is better)
Translates to: LPPCKMCLSPSAVIVRPLYPNLI*NCGSHN
Trigger: ATTATGGGAGCCACAATTCAAGATGAGATTTGGGTA...GAGAGGCCTCACAATCACGGCAGAAGGCGAAAGGCACATCTTACATGGTGGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587382.5
CDS-3UTR CAA 90 bp GGTTCTCTGGAGTCCCCTTGGCCAGCAGAGAGTCTGTTCACTTGGTTGGAGAGTACTGCGCCTGGCCAATaGTTTTATTCTTTAAGTGTA +
Preference number: 5 (lower is better)
Translates to: GSLESPWPAESLFTWLESTAPGQ*FYSLSV
Trigger: TACACTTAAAGAATAAAACAATTGGCCAGGCGCAGT...ACTCTCCAACCAAGTGAACAGACTCTCTGCTGGCCAAGGGGACTCCAGAGAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610723.4
CDS CCA 90 bp CCTCCAGGTCATCCAGCTTCACACTCCATGTCATGTGGAAGCCATTaGTCATCAGGTAAAAGTTCTTCACATCTTCAGGCATCACACAGT +
Preference number: 5 (lower is better)
Translates to: PPGHPASHSMSCGSH*SSGKSSSHLQASHS
Trigger: ACTGTGTGATGCCTGAAGATGTGAAGAACTTTTACCTGATGACCAATGGCTTCCACATGACATGGAGTGTGAAGCTGGATGACCTGGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593035.5
CDS-3UTR CAA 90 bp GGGAACAGGACCTTAAACAGTTCCACAGGCTCGCCTCTTCAGAATGGCAAAACTACTTTCCCACTGCCATaGCATGAATCCAGCTCAAAT +
Preference number: 5 (lower is better)
Translates to: GNRTLNSSTGSPLQNGKTTFPLP*HESSSN
Trigger: ATTTGAGCTGGATTCATGCAATGGCAGTGGGAAAGT...AGTTTTGCCATTCTGAAGAGGCGAGCCTGTGGAACTGTTTAAGGTCCTGTTCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590652.5
ENST00000614939.4
CDS-3UTR CAA 90 bp GATGGAAATGTTCCATATCTTTGTGCTAATACAGAATCTACCAGCCACATGAATGGAGCTGGTAGGGAGTaGGAGGGAGGGGTGCTCACT +
Preference number: 5 (lower is better)
Translates to: DGNVPYLCANTESTSHMNGAGRE*EGGVLT
Trigger: AGTGAGCACCCCTCCCTCCAACTCCCTACCAGCTCC...ATTCATGTGGCTGGTAGATTCTGTATTAGCACAAAGATATGGAACATTTCCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334295.9
ENST00000383056.7
ENST00000593035.5
CDS-3UTR CAA 90 bp AATGCAGTTCTAATGCTTCATGGGTCAAAACCAGTGGTTTCTTTGGGGGACCTCCTAACCTCGCTTGTCTaGGAGAAGCAGCCAAATGCT +
Preference number: 5 (lower is better)
Translates to: NAVLMLHGSKPVVSLGDLLTSLV*EKQPNA
Trigger: AGCATTTGGCTGCTTCTCCAAGACAAGCGAGGTTAG...GAGGTCCCCCAAAGAAACCACTGGTTTTGACCCATGAAGCATTAGAACTGCATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334295.9
CDS-3UTR CAA 90 bp ATGGTCAGAAACTCAGTTTCTAAGGTTCTCTGGAGTCCCCTTGGCCAGCAGAGAATGATTGCGACACTGTaGTTCCCATGCTGTTGGATT +
Preference number: 5 (lower is better)
Translates to: MVRNSVSKVLWSPLGQQRMIATL*FPCCWI
Trigger: AATCCAACAGCATGGGAACAACAGTGTCGCAATCAT...TCTCTGCTGGCCAAGGGGACTCCAGAGAACCTTAGAAACTGAGTTTCTGACCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000590842.5
ENST00000591906.5
ENST00000610723.4
CDS-3UTR CAA 90 bp GGTTCTCTGGAGTCCCCTTGGCCAGCAGAGAGTCTGTTCACTTGGTTGGAGAGTATCAATGCTGATCAGTaGTTGTGTCTAAAACCACAA +
Preference number: 5 (lower is better)
Translates to: GSLESPWPAESLFTWLESINADQ*LCLKPQ
Trigger: TTGTGGTTTTAGACACAACAACTGATCAGCATTGAT...ACTCTCCAACCAAGTGAACAGACTCTCTGCTGGCCAAGGGGACTCCAGAGAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000590842.5
ENST00000591906.5
ENST00000610723.4
CDS-3UTR CAA 90 bp CAGGACCTTAAACAGTTCCACAGGCTCGCCTCTTCAGAATGGCAAAACTCTTCTACAGCTACAGATAGATaGCTTCAGGGCCCAAAGGTA +
Preference number: 5 (lower is better)
Translates to: QDLKQFHRLASSEWQNSSTATDR*LQGPKV
Trigger: TACCTTTGGGCCCTGAAGCAATCTATCTGTAGCTGT...AGAAGAGTTTTGCCATTCTGAAGAGGCGAGCCTGTGGAACTGTTTAAGGTCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590258.2
CDS-3UTR CAA 90 bp AAATCATGGAAGATGGGGTATCCATCCCCTCAAACATTTATCCTTTGTGTGAGAGAGGCTGGGGCTGCCTaGGGGTCTTTGACTATCACA +
Preference number: 5 (lower is better)
Translates to: KSWKMGYPSPQTFILCVREAGAA*GSLTIT
Trigger: TGTGATAGTCAAAGACCCCAAGGCAGCCCCAGCCTC...TCTCACACAAAGGATAAATGTTTGAGGGGATGGATACCCCATCTTCCATGATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000587382.5
CDS GCA 90 bp AAACTTTCCCACTGCCATTGCATGAATCCAGCTCAAATATCACACTaGGAGAGTCAAAGTGAGGCTTCTCTGGCTGATCATCACTGGCAT +
Preference number: 5 (lower is better)
Translates to: KLSHCHCMNPAQISH*ESQSEASLADHHWH
Trigger: ATGCCAGTGATGATCAGCCAGAGAAGCCTCACTTTGACTCTCGCAGTGTGATATTTGAGCTGGATTCATGCAATGGCAGTGGGAAAGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383056.7
ENST00000590500.5
CDS CCA 90 bp CATCACTGGCATCCAGCTTCACACTCCATGTCATGTGGAAGCCATTaGTCATCAGGTAAAAGTTCTTCACATCTTCAGGCATCACACAGT +
Preference number: 5 (lower is better)
Translates to: HHWHPASHSMSCGSH*SSGKSSSHLQASHS
Trigger: ACTGTGTGATGCCTGAAGATGTGAAGAACTTTTACCTGATGACCAATGGCTTCCACATGACATGGAGTGTGAAGCTGGATGCCAGTGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383056.7
ENST00000590500.5
CDS CCA 90 bp CTGACTCACCATCCAGCTTCACACTCCATGTCATGTGGAAGCCATTaGTCATCAGGTAAAAGTTCTTCACATCTTCAGGCATCACACAGT +
Preference number: 5 (lower is better)
Translates to: LTHHPASHSMSCGSH*SSGKSSSHLQASHS
Trigger: ACTGTGTGATGCCTGAAGATGTGAAGAACTTTTACCTGATGACCAATGGCTTCCACATGACATGGAGTGTGAAGCTGGATGGTGAGTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587511.1
CDS-3UTR CAA 90 bp AGGACCTTAAACAGTTCCACAGGCTCGCCTCTTCAGAATGGCAAAACTCTTCTCACTTTCCCACTGCCATaGCATGAATCCAGCTCAAAT +
Preference number: 5 (lower is better)
Translates to: RTLNSSTGSPLQNGKTLLTFPLP*HESSSN
Trigger: ATTTGAGCTGGATTCATGCAATGGCAGTGGGAAAGT...GAGAAGAGTTTTGCCATTCTGAAGAGGCGAGCCTGTGGAACTGTTTAAGGTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590652.5
ENST00000614939.4
CDS-3UTR CAA 90 bp TGGAGTCCCCTTGGCCAGCAGAGAGTCTGTTCACTTGGTTGGAGAGTTTTATTTACTTTCCCACTGCCATaGCATGAATCCAGCTCAAAT +
Preference number: 5 (lower is better)
Translates to: WSPLGQQRVCSLGWRVLFTFPLP*HESSSN
Trigger: ATTTGAGCTGGATTCATGCAATGGCAGTGGGAAAGT...AAATAAAACTCTCCAACCAAGTGAACAGACTCTCTGCTGGCCAAGGGGACTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000590842.5
ENST00000591906.5
CDS-3UTR CAA 90 bp GCTCATCCAGCTTCACACTCCATGTCATGTGGAAGCCATTGGTCATCAGGTAAAACTTTCCCACTGCCATaGCATGAATCCAGCTCAAAT +
Preference number: 5 (lower is better)
Translates to: AHPASHSMSCGSHWSSGKTFPLP*HESSSN
Trigger: ATTTGAGCTGGATTCATGCAATGGCAGTGGGAAAGT...TTTACCTGATGACCAATGGCTTCCACATGACATGGAGTGTGAAGCTGGATGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000585635.5
ENST00000590692.5
ENST00000591823.5
CDS-3UTR CAA 90 bp CTTAAACAGTTCCACAGGCTCGCCTCTTCAGAATGGCAAAACTCTTCTCAGTGTTGTCCCCAGCTATTGTaGGTCGTCTGTTGGATTTGT +
Preference number: 5 (lower is better)
Translates to: LKQFHRLASSEWQNSSQCCPQLL*VVCWIC
Trigger: ACAAATCCAACAGACGACCAACAATAGCTGGGGACA...ACACTGAGAAGAGTTTTGCCATTCTGAAGAGGCGAGCCTGTGGAACTGTTTAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590258.2
CDS-3UTR CAA 90 bp TGGGTGAGGCAGCTACCTCCTCATTCACCCTTATCCAGCCTTTATTTTGATGTTAGGCCTTTTAGTGAGTaGAGGCTAAGACCCACAGTA +
Preference number: 5 (lower is better)
Translates to: WVRQLPPHSPLSSLYFDVRPFSE*RLRPTV
Trigger: TACTGTGGGTCTTAGCCTCAACTCACTAAAAGGCCT...AACATCAAAATAAAGGCTGGATAAGGGTGAATGAGGAGGTAGCTGCCTCACCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590258.2
CDS-3UTR CAA 90 bp ACAGTTATTCTTTTGTTCCCAGGAAGAAATCATATGACGTTCAGCAGGAGGCTTTGTTCCTCCCTTACCTaGGCCTGTGGGCTAATGCCA +
Preference number: 5 (lower is better)
Translates to: TVILLFPGRNHMTFSRRLCSSLT*ACGLMP
Trigger: TGGCATTAGCCCACAGGCCAAGGTAAGGGAGGAACA...AAGCCTCCTGCTGAACGTCATATGATTTCTTCCTGGGAACAAAAGAATAACTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591823.5
CDS-3UTR CAA 90 bp CCAGCTTCACACTCCATGTCATGTGGAAGCCATTGGTCATCAGGTAAAAGTTCTTGGAGTATTGCCATGTaGTCCAGGCTTGTCTTGAAC +
Preference number: 5 (lower is better)
Translates to: PASHSMSCGSHWSSGKSSWSIAM*SRLVLN
Trigger: GTTCAAGACAAGCCTGGACAACATGGCAATACTCCA...AGAACTTTTACCTGATGACCAATGGCTTCCACATGACATGGAGTGTGAAGCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587207.1
CDS-3UTR CAA 90 bp GGAAGCCATTGGTCATCAGGTAAAAGTTCTTCACATCTTCAGGCATCACACAGTTGTAGAGCTGGAGTATaGCCATGTTGTCCAGGCTTG +
Preference number: 5 (lower is better)
Translates to: GSHWSSGKSSSHLQASHSCRAGV*PCCPGL
Trigger: CAAGCCTGGACAACATGGCAATACTCCAGCTCTACA...ACTGTGTGATGCCTGAAGATGTGAAGAACTTTTACCTGATGACCAATGGCTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587207.1
CDS-3UTR CAA 90 bp AAATCATGGAAGATGGGGTATCCATCCCCTCAAACATTTATCCTTTGTGTGAGAAGTCCACATCAGACCTaGGCCTGTGGGCTAATGCCA +
Preference number: 5 (lower is better)
Translates to: KSWKMGYPSPQTFILCVRSPHQT*ACGLMP
Trigger: TGGCATTAGCCCACAGGCCAAGGTCTGATGTGGACT...TCTCACACAAAGGATAAATGTTTGAGGGGATGGATACCCCATCTTCCATGATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587382.5
CDS-3UTR CAA 90 bp AAATCATGGAAGATGGGGTATCCATCCCCTCAAACATTTATCCTTTGTGTGAGACATAATTCCCGTATGTaGTGGGAGGGACCCAGTGGG +
Preference number: 5 (lower is better)
Translates to: KSWKMGYPSPQTFILCVRHNSRM*WEGPSG
Trigger: CCCACTGGGTCCCTCCCACAACATACGGGAATTATG...TCTCACACAAAGGATAAATGTTTGAGGGGATGGATACCCCATCTTCCATGATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587382.5
CDS-3UTR CAA 90 bp TGCTTCATGGGTCAAAACCAGTGGTTTCTTTGGGGGACCTCTCTAATCAATCAGACTTTCCCACTGCCATaGCATGAATCCAGCTCAAAT +
Preference number: 5 (lower is better)
Translates to: CFMGQNQWFLWGTSLINQTFPLP*HESSSN
Trigger: ATTTGAGCTGGATTCATGCAATGGCAGTGGGAAAGT...CTGATTGATTAGAGAGGTCCCCCAAAGAAACCACTGGTTTTGACCCATGAAGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000334295.9
ENST00000383056.7
ENST00000593035.5
CDS-3UTR CAA 90 bp AGAAAATGCCAGTATAACGCTCTGTCCAGGAACCAGATCTCAGTGTCTTCTGCTACTTTCCCACTGCCATaGCATGAATCCAGCTCAAAT +
Preference number: 5 (lower is better)
Translates to: RKCQYNALSRNQISVSSATFPLP*HESSSN
Trigger: ATTTGAGCTGGATTCATGCAATGGCAGTGGGAAAGT...AGCAGAAGACACTGAGATCTGGTTCCTGGACAGAGCGTTATACTGGCATTTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585635.5
ENST00000591823.5
CDS-3UTR CAA 90 bp GGGACTAAAAGCCTTACAATTTTGGTCATTCAACTAGAAAGAGGCCTACGGTCCATACATGCTGAACCATaGCTTGGCCTGTGGGCTAAT +
Preference number: 5 (lower is better)
Translates to: GTKSLTILVIQLERGLRSIHAEP*LGLWAN
Trigger: ATTAGCCCACAGGCCAAGCAATGGTTCAGCATGTAT...GGACCGTAGGCCTCTTTCTAGTTGAATGACCAAAATTGTAAGGCTTTTAGTCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334295.9
ENST00000383056.7
ENST00000593035.5
CDS-3UTR CAA 90 bp TGCTTCATGGGTCAAAACCAGTGGTTTCTTTGGGGGACCTCTCTAATCAATCAGAAACCAGTGGTTTCTTaGGGGGACCTCTCTAATCAA +
Preference number: 5 (lower is better)
Translates to: CFMGQNQWFLWGTSLINQKPVVS*GDLSNQ
Trigger: TTGATTAGAGAGGTCCCCCAAAGAAACCACTGGTTT...CTGATTGATTAGAGAGGTCCCCCAAAGAAACCACTGGTTTTGACCCATGAAGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000334295.9
ENST00000383056.7
ENST00000593035.5
CDS-3UTR CAA 90 bp GTGCCGTTGGCTCTTCCTTTGATCAATTCTGGCAAGAAAAATACTTCTGGAAGACTTCCAAAGGAACTCTaGGAAGCCCACCCTGTTCTA +
Preference number: 5 (lower is better)
Translates to: VPLALPLINSGKKNTSGRLPKEL*EAHPVL
Trigger: TAGAACAGGGTGGGCTTCCAAGAGTTCCTTTGGAAG...TCTTCCAGAAGTATTTTTCTTGCCAGAATTGATCAAAGGAAGAGCCAACGGCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334295.9
CDS-3UTR CAA 90 bp AGTCCCCTTGGCCAGCAGAGAGTCTGTTCACTTGGTTGGAGAGTTTTATTTGTAATGATTGCGACACTGTaGTTCCCATGCTGTTGGATT +
Preference number: 5 (lower is better)
Translates to: SPLGQQRVCSLGWRVLFVMIATL*FPCCWI
Trigger: AATCCAACAGCATGGGAACAACAGTGTCGCAATCAT...TACAAATAAAACTCTCCAACCAAGTGAACAGACTCTCTGCTGGCCAAGGGGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000590842.5
ENST00000591906.5
ENST00000610723.4
CDS-3UTR CAA 90 bp GTCAGAAACTCAGTTTCTAAGGTTCTCTGGAGTCCCCTTGGCCAGCAGAGAGTCAGTCTGTTCACTTGGTaGGAGAGTTTTATTTGTAGT +
Preference number: 5 (lower is better)
Translates to: VRNSVSKVLWSPLGQQRVSLFTW*ESFICS
Trigger: ACTACAAATAAAACTCTCCAACCAAGTGAACAGACT...GACTCTCTGCTGGCCAAGGGGACTCCAGAGAACCTTAGAAACTGAGTTTCTGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000590842.5
ENST00000591906.5
ENST00000610723.4
CDS-3UTR CAA 90 bp TCATGCCAAGCTAAACACAAGCCAATTCTAAGTCAGTTAAATATGAGCATCCCTCTGCTACGCATTGACTaGGATCTCCAGGAGTCCCCT +
Preference number: 5 (lower is better)
Translates to: SCQAKHKPILSQLNMSIPLLRID*DLQESP
Trigger: AGGGGACTCCTGGAGATCCAAGTCAATGCGTAGCAG...AGGGATGCTCATATTTAACTGACTTAGAATTGGCTTGTGTTTAGCTTGGCATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590258.2
CDS-3UTR CAA 90 bp TTATTCTTCTGGGAACAGGACCTTAAACAGTTCCACAGGCTCGCCTCTTCAGAAAATAAGTTTGGCAGTTaGCTCCTTAGCCTCCATTCC +
Preference number: 5 (lower is better)
Translates to: LFFWEQDLKQFHRLASSENKFGS*LLSLHS
Trigger: GGAATGGAGGCTAAGGAGCAAACTGCCAAACTTATT...TTCTGAAGAGGCGAGCCTGTGGAACTGTTTAAGGTCCTGTTCCCAGAAGAATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590258.2
CDS CCA 90 bp ATTTGTCAAATAGTACATGATGGATGTGAACACCCCAGGAGAGCCTaGAACTTGCGAGAGTTGGGTCTGTACATTATAGACGGTTGTGTT +
Preference number: 5 (lower is better)
Translates to: ICQIVHDGCEHPRRA*NLRELGLYIIDGCV
Trigger: AACACAACCGTCTATAATGTACAGACCCAACTCTCGCAAGTTCCAGGCTCTCCTGGGGTGTTCACATCCATCATGTACTATTTGACAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590652.5
CDS-3UTR CAA 90 bp GGAAGCCATTGGTCATCAGGTAAAAGTTCTTCACATCTTCAGGCATCACACAGTACTTTCCCACTGCCATaGCATGAATCCAGCTCAAAT +
Preference number: 5 (lower is better)
Translates to: GSHWSSGKSSSHLQASHSTFPLP*HESSSN
Trigger: ATTTGAGCTGGATTCATGCAATGGCAGTGGGAAAGT...ACTGTGTGATGCCTGAAGATGTGAAGAACTTTTACCTGATGACCAATGGCTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000585635.5
ENST00000590692.5
ENST00000591823.5
CDS-3UTR CAA 90 bp TGCTTCATGGGTCAAAACCAGTGGTTTCTTTGGGGGACCTCTCTAATCAATCAGCAGGCCCTTTCTTTTTaGGGATTACGATCTTGTTCT +
Preference number: 5 (lower is better)
Translates to: CFMGQNQWFLWGTSLINQQALSF*GLRSCS
Trigger: AGAACAAGATCGTAATCCCAAAAAAGAAAGGGCCTG...CTGATTGATTAGAGAGGTCCCCCAAAGAAACCACTGGTTTTGACCCATGAAGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000334295.9
ENST00000383056.7
ENST00000593035.5
CDS-3UTR CAA 90 bp TGCTTCATGGGTCAAAACCAGTGGTTTCTTTGGGGGACCTCTCTAATCAATCAGAGCACTCAGACTTATTaGGGCACTTACACAAGATTC +
Preference number: 5 (lower is better)
Translates to: CFMGQNQWFLWGTSLINQSTQTY*GTYTRF
Trigger: GAATCTTGTGTAAGTGCCCAAATAAGTCTGAGTGCT...CTGATTGATTAGAGAGGTCCCCCAAAGAAACCACTGGTTTTGACCCATGAAGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000334295.9
ENST00000383056.7
ENST00000593035.5
CDS-3UTR CAA 90 bp TTTCTAAGGTTCTCTGGAGTCCCCTTGGCCAGCAGAGAGTCTGTTCACTTGGTTAGTCTGTTCACTTGGTaGGAGAGTTTTATTTGTAGT +
Preference number: 5 (lower is better)
Translates to: FLRFSGVPLASRESVHLVSLFTW*ESFICS
Trigger: ACTACAAATAAAACTCTCCAACCAAGTGAACAGACT...AACCAAGTGAACAGACTCTCTGCTGGCCAAGGGGACTCCAGAGAACCTTAGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000590842.5
ENST00000591906.5
ENST00000610723.4
CDS-3UTR CAA 90 bp CTTAAACAGTTCCACAGGCTCGCCTCTTCAGAATGGCAAAACTCTTCTCAGTGTGTACATTATAGACGGTaGTGTTTAATCACCTTGGCC +
Preference number: 5 (lower is better)
Translates to: LKQFHRLASSEWQNSSQCVHYRR*CLITLA
Trigger: GGCCAAGGTGATTAAACACAACCGTCTATAATGTAC...ACACTGAGAAGAGTTTTGCCATTCTGAAGAGGCGAGCCTGTGGAACTGTTTAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590652.5
CDS-3UTR CAA 90 bp AATGCAGTTCTAATGCTTCATGGGTCAAAACCAGTGGTTTCTTTGGGGGACCTCTTGCTCTTAAACACTTaGCTGGGATCTAGCTTATTC +
Preference number: 5 (lower is better)
Translates to: NAVLMLHGSKPVVSLGDLLLLNT*LGSSLF
Trigger: GAATAAGCTAGATCCCAGCAAAGTGTTTAAGAGCAA...GAGGTCCCCCAAAGAAACCACTGGTTTTGACCCATGAAGCATTAGAACTGCATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000334295.9
ENST00000383056.7
ENST00000593035.5
CDS-3UTR CAA 90 bp CTGGCTAATGTCGGTGGGACTAAAAGCCTTACAATTTTGGTCATTCAACTAGAATCCTATCCAGTGCCGTaGGCTCTTCCTTTGATCAAT +
Preference number: 5 (lower is better)
Translates to: LANVGGTKSLTILVIQLESYPVP*ALPLIN
Trigger: ATTGATCAAAGGAAGAGCCAACGGCACTGGATAGGA...TTCTAGTTGAATGACCAAAATTGTAAGGCTTTTAGTCCCACCGACATTAGCCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334295.9
CDS-3UTR CAA 90 bp GAGTCCCCTTGGCCAGCAGAGAGTCTGTTCACTTGGTTGGAGAGTTTTATTTGTATCAATGCTGATCAGTaGTTGTGTCTAAAACCACAA +
Preference number: 5 (lower is better)
Translates to: ESPWPAESLFTWLESFICINADQ*LCLKPQ
Trigger: TTGTGGTTTTAGACACAACAACTGATCAGCATTGAT...ACAAATAAAACTCTCCAACCAAGTGAACAGACTCTCTGCTGGCCAAGGGGACTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000590842.5
ENST00000591906.5
ENST00000610723.4
CDS-3UTR CAA 90 bp TTAAACAGTTCCACAGGCTCGCCTCTTCAGAATGGCAAAACTCTTCTCAGTGTCTTCACATCCAACAGTTaGAAAAGGGAGAGCTCAATT +
Preference number: 5 (lower is better)
Translates to: LNSSTGSPLQNGKTLLSVFTSNS*KRESSI
Trigger: AATTGAGCTCTCCCTTTTCAAACTGTTGGATGTGAA...GACACTGAGAAGAGTTTTGCCATTCTGAAGAGGCGAGCCTGTGGAACTGTTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590258.2
CDS-3UTR CAA 90 bp TGGGTGAGGCAGCTACCTCCTCATTCACCCTTATCCAGCCTTTATTTTGATGTTAATTCTGTTGCTCAGTaGAATGTAATCTGTCTCCAG +
Preference number: 5 (lower is better)
Translates to: WVRQLPPHSPLSSLYFDVNSVAQ*NVICLQ
Trigger: CTGGAGACAGATTACATTCAACTGAGCAACAGAATT...AACATCAAAATAAAGGCTGGATAAGGGTGAATGAGGAGGTAGCTGCCTCACCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590258.2
CDS-3UTR CAA 90 bp TTTGGGGGAGACAGGGAGCTTGTTGAAGCAGACATTTGTCAAATAGTACATGATTGGAACTTGCGAGAGTaGGGTCTGTACATTATAGAC +
Preference number: 5 (lower is better)
Translates to: FGGDRELVEADICQIVHDWNLRE*GLYIID
Trigger: GTCTATAATGTACAGACCCAACTCTCGCAAGTTCCA...ATCATGTACTATTTGACAAATGTCTGCTTCAACAAGCTCCCTGTCTCCCCCAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000590652.5
CDS-3UTR CAA 90 bp TTTGGGGGAGACAGGGAGCTTGTTGAAGCAGACATTTGTCAAATAGTACATGATGAGACAGGGAGCTTGTaGAAGCAGACATTTGTCAAA +
Preference number: 5 (lower is better)
Translates to: FGGDRELVEADICQIVHDETGSL*KQTFVK
Trigger: TTTGACAAATGTCTGCTTCAACAAGCTCCCTGTCTC...ATCATGTACTATTTGACAAATGTCTGCTTCAACAAGCTCCCTGTCTCCCCCAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000590652.5
CDS-3UTR CAA 90 bp CACTGCCATTGCATGAATCCAGCTCAAATATCACACTGCGAGAGTCAAAGTGAGCACACAGTTATTCTTTaGTTCCCAGGAAGAAATCAT +
Preference number: 5 (lower is better)
Translates to: HCHCMNPAQISHCESQSEHTVIL*FPGRNH
Trigger: ATGATTTCTTCCTGGGAACAAAAGAATAACTGTGTG...CTCACTTTGACTCTCGCAGTGTGATATTTGAGCTGGATTCATGCAATGGCAGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000585635.5
ENST00000590692.5
ENST00000591823.5
CDS-3UTR CAA 90 bp TCATGGAAGATGGGGTATCCATCCCCTCAAACATTTATCCTTTGTGTGAGAAATACTTTCCCACTGCCATaGCATGAATCCAGCTCAAAT +
Preference number: 5 (lower is better)
Translates to: SWKMGYPSPQTFILCVRNTFPLP*HESSSN
Trigger: ATTTGAGCTGGATTCATGCAATGGCAGTGGGAAAGT...ATTTCTCACACAAAGGATAAATGTTTGAGGGGATGGATACCCCATCTTCCATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587382.5
CDS-3UTR CAA 90 bp TCCAGTGCCGTTGGCTCTTCCTTTGATCAATTCTGGCAAGAAAAATACTTCTGGTTGCTCTTAAACACTTaGCTGGGATCTAGCTTATTC +
Preference number: 5 (lower is better)
Translates to: SSAVGSSFDQFWQEKYFWLLLNT*LGSSLF
Trigger: GAATAAGCTAGATCCCAGCAAAGTGTTTAAGAGCAA...CCAGAAGTATTTTTCTTGCCAGAATTGATCAAAGGAAGAGCCAACGGCACTGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334295.9
CDS-3UTR CAA 90 bp TGCTTCATGGGTCAAAACCAGTGGTTTCTTTGGGGGACCTCTCTAATCAATCAGATTACGATCTTGTTCTaGCTCTTAAACACTTTGCTG +
Preference number: 5 (lower is better)
Translates to: CFMGQNQWFLWGTSLINQITILF*LLNTLL
Trigger: CAGCAAAGTGTTTAAGAGCAAGAACAAGATCGTAAT...CTGATTGATTAGAGAGGTCCCCCAAAGAAACCACTGGTTTTGACCCATGAAGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000334295.9
ENST00000383056.7
ENST00000593035.5
CDS-3UTR CAA 90 bp TGCTTCATGGGTCAAAACCAGTGGTTTCTTTGGGGGACCTCTCTAATCAATCAGTTTGGGATTACGATCTaGTTCTTGCTCTTAAACACT +
Preference number: 5 (lower is better)
Translates to: CFMGQNQWFLWGTSLINQFGITI*FLLLNT
Trigger: AGTGTTTAAGAGCAAGAACAAGATCGTAATCCCAAA...CTGATTGATTAGAGAGGTCCCCCAAAGAAACCACTGGTTTTGACCCATGAAGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000334295.9
ENST00000383056.7
ENST00000593035.5
CDS-3UTR CAA 90 bp CCCCTTGGCCAGCAGAGAGTCTGTTCACTTGGTTGGAGAGTTTTATTTGTAGTTAGTCTGTTCACTTGGTaGGAGAGTTTTATTTGTAGT +
Preference number: 5 (lower is better)
Translates to: PLGQQRVCSLGWRVLFVVSLFTW*ESFICS
Trigger: ACTACAAATAAAACTCTCCAACCAAGTGAACAGACT...AACTACAAATAAAACTCTCCAACCAAGTGAACAGACTCTCTGCTGGCCAAGGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000590842.5
ENST00000591906.5
ENST00000610723.4
CDS-3UTR CAA 90 bp CTGAGTCTCCACAACACCAAAATATCCAGATGTAAACCCCAAACTTGTACACAAGGTCATTGGCCATTCTaGAGTCTTGTGTGTTCCATA +
Preference number: 5 (lower is better)
Translates to: LSLHNTKISRCKPQTCTQGHWPF*SLVCSI
Trigger: TATGGAACACACAAGACTCAAGAATGGCCAATGACC...TTGTGTACAAGTTTGGGGTTTACATCTGGATATTTTGGTGTTGTGGAGACTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590258.2
CDS-3UTR CAA 90 bp TGGGTGAGGCAGCTACCTCCTCATTCACCCTTATCCAGCCTTTATTTTGATGTTTTGTTGGTTGACCAATaGATGGATATTATGTTGACC +
Preference number: 5 (lower is better)
Translates to: WVRQLPPHSPLSSLYFDVLLVDQ*MDIMLT
Trigger: GGTCAACATAATATCCATCAATTGGTCAACCAACAA...AACATCAAAATAAAGGCTGGATAAGGGTGAATGAGGAGGTAGCTGCCTCACCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590258.2
CDS-3UTR CAA 90 bp GGGACTAAAAGCCTTACAATTTTGGTCATTCAACTAGAAAGAGGCCTACGGTCCATTACGATCTTGTTCTaGCTCTTAAACACTTTGCTG +
Preference number: 5 (lower is better)
Translates to: GTKSLTILVIQLERGLRSITILF*LLNTLL
Trigger: CAGCAAAGTGTTTAAGAGCAAGAACAAGATCGTAAT...GGACCGTAGGCCTCTTTCTAGTTGAATGACCAAAATTGTAAGGCTTTTAGTCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334295.9
ENST00000383056.7
ENST00000593035.5
CDS-3UTR CAA 90 bp GGGACTAAAAGCCTTACAATTTTGGTCATTCAACTAGAAAGAGGCCTACGGTCCTTTGGGATTACGATCTaGTTCTTGCTCTTAAACACT +
Preference number: 5 (lower is better)
Translates to: GTKSLTILVIQLERGLRSFGITI*FLLLNT
Trigger: AGTGTTTAAGAGCAAGAACAAGATCGTAATCCCAAA...GGACCGTAGGCCTCTTTCTAGTTGAATGACCAAAATTGTAAGGCTTTTAGTCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334295.9
ENST00000383056.7
ENST00000593035.5
CDS-3UTR CAA 90 bp CAAATATTAAGCATATGTGGGCTAGAGGTTCCCCCATATGTCAATGGGAAAATGTTTGAGAACTCCCACTaGATTGCCACAGATTTGAGT +
Preference number: 5 (lower is better)
Translates to: QILSICGLEVPPYVNGKMFENSH*IATDLS
Trigger: ACTCAAATCTGTGGCAATCAAGTGGGAGTTCTCAAA...CATTTTCCCATTGACATATGGGGGAACCTCTAGCCCACATATGCTTAATATTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334295.9
CDS-3UTR CAA 90 bp AATGAACAATGCAGTTCTAATGCTTCATGGGTCAAAACCAGTGGTTTCTTTGGGATGTTTTCCTGCTGTTaGCACAAAAGCCTCACATCT +
Preference number: 5 (lower is better)
Translates to: NEQCSSNASWVKTSGFFGMFSCC*HKSLTS
Trigger: AGATGTGAGGCTTTTGTGCAAACAGCAGGAAAACAT...CCCAAAGAAACCACTGGTTTTGACCCATGAAGCATTAGAACTGCATTGTTCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000334295.9
CDS-3UTR CAA 90 bp TGGCCAGCAGAGAGTCTGTTCACTTGGTTGGAGAGTTTTATTTGTAGTTCTCAGATCAATGCTGATCAGTaGTTGTGTCTAAAACCACAA +
Preference number: 5 (lower is better)
Translates to: WPAESLFTWLESFICSSQINADQ*LCLKPQ
Trigger: TTGTGGTTTTAGACACAACAACTGATCAGCATTGAT...CTGAGAACTACAAATAAAACTCTCCAACCAAGTGAACAGACTCTCTGCTGGCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000591906.5
ENST00000610723.4
CDS-3UTR CAA 90 bp TCTGAAAATTATAATATAAAACAAGCCGTGCTTGCTCTAACTAAGGCTGCCTGGTACACTATGTCTACATaGTGCTCTGAGTCTTGGGAA +
Preference number: 5 (lower is better)
Translates to: SENYNIKQAVLALTKAAWYTMST*CSESWE
Trigger: TTCCCAAGACTCAGAGCACAATGTAGACATAGTGTA...CCAGGCAGCCTTAGTTAGAGCAAGCACGGCTTGTTTTATATTATAATTTTCAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587382.5
CDS TCA 90 bp AGTGATGAGAATTTGGCAGTCTTCTTGCTTGGTTCTAGTCTTCTGTaGTTAGGGTGTAAATACAGACTAGGAAGCTCCATGTTTTCTTTA +
Preference number: 5 (lower is better)
Translates to: SDENLAVFLLGSSLL*LGCKYRLGSSMFSL
Trigger: TAAAGAAAACATGGAGCTTCCTAGTCTGTATTTACACCCTAATCACAGAAGACTAGAACCAAGCAAGAAGACTGCCAAATTCTCATCACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590337.5
CDS-3UTR CAA 90 bp AATGAACAATGCAGTTCTAATGCTTCATGGGTCAAAACCAGTGGTTTCTTTGGGCACACAGTTATTCTTTaGTTCCCAGGAAGAAATCAT +
Preference number: 5 (lower is better)
Translates to: NEQCSSNASWVKTSGFFGHTVIL*FPGRNH
Trigger: ATGATTTCTTCCTGGGAACAAAAGAATAACTGTGTG...CCCAAAGAAACCACTGGTTTTGACCCATGAAGCATTAGAACTGCATTGTTCATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334295.9
ENST00000383056.7
ENST00000593035.5
CDS-3UTR CAA 90 bp TCTGAAAATTATAATATAAAACAAGCCGTGCTTGCTCTAACTAAGGCTGCCTGGGTGATTACTGAATACTaGAAATGTGGCTGGAGATTG +
Preference number: 5 (lower is better)
Translates to: SENYNIKQAVLALTKAAWVITEY*KCGWRL
Trigger: CAATCTCCAGCCACATTTCAAGTATTCAGTAATCAC...CCAGGCAGCCTTAGTTAGAGCAAGCACGGCTTGTTTTATATTATAATTTTCAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587382.5
CDS-3UTR CAA 90 bp TCTGAAAATTATAATATAAAACAAGCCGTGCTTGCTCTAACTAAGGCTGCCTGGCACACAGTTATTCTTTaGTTCCCAGGAAGAAATCAT +
Preference number: 5 (lower is better)
Translates to: SENYNIKQAVLALTKAAWHTVIL*FPGRNH
Trigger: ATGATTTCTTCCTGGGAACAAAAGAATAACTGTGTG...CCAGGCAGCCTTAGTTAGAGCAAGCACGGCTTGTTTTATATTATAATTTTCAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587382.5
CDS-3UTR CAA 90 bp TCATGCCAAGCTAAACACAAGCCAATTCTAAGTCAGTTAAATATGAGCATCCCTAAACATTTTGTCTTGTaGAGCCAAACATTCAGTCTG +
Preference number: 5 (lower is better)
Translates to: SCQAKHKPILSQLNMSIPKHFVL*SQTFSL
Trigger: CAGACTGAATGTTTGGCTCAACAAGACAAAATGTTT...AGGGATGCTCATATTTAACTGACTTAGAATTGGCTTGTGTTTAGCTTGGCATGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590258.2
CDS-3UTR CAA 90 bp AAATATACACTCTTCTCTCTTGACATATCCCACCTAGAAGATACAGTCTCTCCTTTGTATAAAATTGCTTaGGACTGCAGTTTCCTCCAT +
Preference number: 5 (lower is better)
Translates to: KYTLFSLDISHLEDTVSPLYKIA*DCSFLH
Trigger: ATGGAGGAAACTGCAGTCCAAAGCAATTTTATACAA...AGGAGAGACTGTATCTTCTAGGTGGGATATGTCAAGAGAGAAGAGTGTATATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587382.5
CDS CCA 72 bp TGCAGCCCAGCCCCGGGGACGATGCCTCCTCCTCCATaGCTCGCGACCGCGATTCGCGCGCGGCGGGAGCGG +
Preference number: 6 (lower is better)
Translates to: CSPAPGTMPPPP*LATAIRARRER
Trigger: CCGCTCCCGCCGCGCGCGAATCGCGGTCGCGAGCCATGGAGGAGGAGGCATCGTCCCCGGGGCTGGGCTGCA
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000334295.9
ENST00000383056.7
ENST00000585635.5
ENST00000587129.5
ENST00000587207.1
ENST00000588909.1
ENST00000590337.5
ENST00000590842.5
ENST00000591648.1
ENST00000593035.5
ENST00000610723.4
ENST00000614939.4
CDS CCA 72 bp TGCGGCCAATGGGGACCGAGCCTGCAGGCCGAGGCGTaGCGGCCCAGGCGCGACGCCCCGAGTGGCGGTTGT +
Preference number: 6 (lower is better)
Translates to: CGQWGPSLQAEA*RPRRDAPSGGC
Trigger: ACAACCGCCACTCGGGGCGTCGCGCCTGGGCCGCCACGCCTCGGCCTGCAGGCTCGGTCCCCATTGGCCGCA
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000610723.4
ENST00000614939.4
CDS CAA 72 bp GGCGTGGCGGCCCAGGCGCGACGCCCCGAGTGGCGGTaGTTTCAAGATGGCGGACGTGGCGGGCCCCTCCCG +
Preference number: 6 (lower is better)
Translates to: GVAAQARRPEWR*FQDGGRGGPLP
Trigger: CGGGAGGGGCCCGCCACGTCCGCCATCTTGAAACAACCGCCACTCGGGGCGTCGCGCCTGGGCCGCCACGCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000610723.4
ENST00000614939.4
CDS GCA 72 bp CAGGTGCGGCTTGCTGCAGCCCAGCCCCGGGGACGATaGCTCCTCCTCCATGGCTCGCGACCGCGATTCGCG +
Preference number: 6 (lower is better)
Translates to: QVRLAAAQPRGR*LLLHGSRPRFA
Trigger: CGCGAATCGCGGTCGCGAGCCATGGAGGAGGAGGCATCGTCCCCGGGGCTGGGCTGCAGCAAGCCGCACCTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000334295.9
ENST00000383056.7
ENST00000585635.5
ENST00000587129.5
ENST00000587207.1
ENST00000588909.1
ENST00000590337.5
ENST00000590842.5
ENST00000591648.1
ENST00000593035.5
ENST00000610723.4
ENST00000614939.4
CDS CAA 90 bp CCTAGGATGCGCGTGATGCCCAGGGTCAGCTTCTCCAGGTGCGGCTaGCTGCAGCCCAGCCCCGGGGACGATGCCTCCTCCTCCATGGCT +
Preference number: 6 (lower is better)
Translates to: PRMRVMPRVSFSRCG*LQPSPGDDASSSMA
Trigger: AGCCATGGAGGAGGAGGCATCGTCCCCGGGGCTGGGCTGCAGCAAGCCGCACCTGGAGAAGCTGACCCTGGGCATCACGCGCATCCTAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000585635.5
ENST00000590692.5
ENST00000591823.5
CDS CAA 90 bp TCTAGGATGCGCGTGATGCCCAGGGTCAGCTTCTCCAGGTGCGGCTaGCTGCAGCCCAGCCCCGGGGACGATGCCTCCTCCTCCATGGCT +
Preference number: 6 (lower is better)
Translates to: SRMRVMPRVSFSRCG*LQPSPGDDASSSMA
Trigger: AGCCATGGAGGAGGAGGCATCGTCCCCGGGGCTGGGCTGCAGCAAGCCGCACCTGGAGAAGCTGACCCTGGGCATCACGCGCATCCTAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000334295.9
ENST00000383056.7
ENST00000587129.5
ENST00000587207.1
ENST00000587511.1
ENST00000588909.1
ENST00000589049.5
ENST00000590337.5
ENST00000590842.5
ENST00000591648.1
ENST00000593035.5
ENST00000610723.4
ENST00000614939.4
CDS CCA 72 bp GGGCCGGACCCCGCCTCAGCGCCGAGGCCAATTTCATaGCATGCCGGGAACGGTAGTTCTCGGCGCCTGAAA +
Preference number: 6 (lower is better)
Translates to: GPDPASAPRPIS*HAGNGSSRRLK
Trigger: TTTCAGGCGCCGAGAACTACCGTTCCCGGCATGCCATGAAATTGGCCTCGGCGCTGAGGCGGGGTCCGGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000334295.9
ENST00000383056.7
ENST00000585635.5
ENST00000587207.1
ENST00000588909.1
ENST00000590337.5
ENST00000591648.1
ENST00000593035.5
ENST00000610723.4
ENST00000614939.4
CDS TCA 72 bp TTTCATGGCATGCCGGGAACGGTAGTTCTCGGCGCCTaGAAGCGCGGCGCAGTGATGATGGGGGCCCGGGGT +
Preference number: 6 (lower is better)
Translates to: FHGMPGTVVLGA*KRGAVMMGARG
Trigger: ACCCCGGGCCCCCATCATCACTGCGCCGCGCTTTCAGGCGCCGAGAACTACCGTTCCCGGCATGCCATGAAA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000334295.9
ENST00000383056.7
ENST00000585635.5
ENST00000587207.1
ENST00000588909.1
ENST00000590337.5
ENST00000591648.1
ENST00000593035.5
ENST00000610723.4
ENST00000614939.4
CDS CAA 90 bp GGGCCATCTGTGCATGGAAACCACCACTCTGGAGCTGGTAGGGAGTaGGAGGGAGGGGTGCTCACTTCCGGGTGGGGTTTCCAGAGCCAG +
Preference number: 6 (lower is better)
Translates to: GPSVHGNHHSGAGRE*EGGVLTSGWGFQSQ
Trigger: CTGGCTCTGGAAACCCCACCCGGAAGTGAGCACCCCTCCCTCCAACTCCCTACCAGCTCCAGAGTGGTGGTTTCCATGCACAGATGGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334295.9
ENST00000383056.7
ENST00000593035.5
CDS GCA 72 bp ACCACTCTGGAGCTGGTAGGGAGTTGGAGGGAGGGGTaGTCACTTCCGGGTGGGGTTTCCAGAGCCAGAGGA +
Preference number: 6 (lower is better)
Translates to: TTLELVGSWREG*SLPGGVSRARG
Trigger: TCCTCTGGCTCTGGAAACCCCACCCGGAAGTGAGCACCCCTCCCTCCAACTCCCTACCAGCTCCAGAGTGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334295.9
ENST00000383056.7
ENST00000593035.5
CDS TCA 72 bp TGCTGCACACGCTACAGCTCCGGGGCTTCATGCTGCTaGCTCTTTGCTTGTGGCCAGTCCCCATGCCTTGGC +
Preference number: 6 (lower is better)
Translates to: CCTRYSSGASCC*LFACGQSPCLG
Trigger: GCCAAGGCATGGGGACTGGCCACAAGCAAAGAGTCAGCAGCATGAAGCCCCGGAGCTGTAGCGTGTGCAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591906.5
CDS CAA 72 bp GTGCATGGAAACCACCACTCTGGAGCTGGTAGGGAGTaGGAGGGAGGGGTGCTCACTTCCGGGTGGGGTTTC +
Preference number: 6 (lower is better)
Translates to: VHGNHHSGAGRE*EGGVLTSGWGF
Trigger: GAAACCCCACCCGGAAGTGAGCACCCCTCCCTCCAACTCCCTACCAGCTCCAGAGTGGTGGTTTCCATGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334295.9
ENST00000383056.7
ENST00000593035.5
CDS CAA 90 bp CCATGCCTTGGCCTGTGGGCTAATGCCATAGCTGGTGAAGGCATATaGCCACTGGGGCAGGCCCAGGTGGGTGATGAGCAGGCGGTAATA +
Preference number: 6 (lower is better)
Translates to: PCLGLWANAIAGEGI*PLGQAQVGDEQAVI
Trigger: TATTACCGCCTGCTCATCACCCACCTGGGCCTGCCCCAGTGGCAATATGCCTTCACCAGCTATGGCATTAGCCCACAGGCCAAGGCATGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591906.5
CDS CAA 90 bp CCATTGCTTGGCCTGTGGGCTAATGCCATAGCTGGTGAAGGCATATaGCCACTGGGGCAGGCCCAGGTGGGTGATGAGCAGGCGGTAATA +
Preference number: 6 (lower is better)
Translates to: PLLGLWANAIAGEGI*PLGQAQVGDEQAVI
Trigger: TATTACCGCCTGCTCATCACCCACCTGGGCCTGCCCCAGTGGCAATATGCCTTCACCAGCTATGGCATTAGCCCACAGGCCAAGCAATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334295.9
ENST00000383056.7
ENST00000590500.5
ENST00000593035.5
CDS CAA 90 bp AAGAGCCTTGGCCTGTGGGCTAATGCCATAGCTGGTGAAGGCATATaGCCACTGGGGCAGGCCCAGGTGGGTGATGAGCAGGCGGTAATA +
Preference number: 6 (lower is better)
Translates to: KSLGLWANAIAGEGI*PLGQAQVGDEQAVI
Trigger: TATTACCGCCTGCTCATCACCCACCTGGGCCTGCCCCAGTGGCAATATGCCTTCACCAGCTATGGCATTAGCCCACAGGCCAAGGCTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587129.5
CDS CAA 90 bp TTTGGGCTTGGCCTGTGGGCTAATGCCATAGCTGGTGAAGGCATATaGCCACTGGGGCAGGCCCAGGTGGGTGATGAGCAGGCGGTAATA +
Preference number: 6 (lower is better)
Translates to: FGLGLWANAIAGEGI*PLGQAQVGDEQAVI
Trigger: TATTACCGCCTGCTCATCACCCACCTGGGCCTGCCCCAGTGGCAATATGCCTTCACCAGCTATGGCATTAGCCCACAGGCCAAGCCCAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590258.2
ENST00000614939.4
CDS CAA 90 bp TCAGACCTTGGCCTGTGGGCTAATGCCATAGCTGGTGAAGGCATATaGCCACTGGGGCAGGCCCAGGTGGGTGATGAGCAGGCGGTAATA +
Preference number: 6 (lower is better)
Translates to: SDLGLWANAIAGEGI*PLGQAQVGDEQAVI
Trigger: TATTACCGCCTGCTCATCACCCACCTGGGCCTGCCCCAGTGGCAATATGCCTTCACCAGCTATGGCATTAGCCCACAGGCCAAGGTCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587382.5
CDS TCA 72 bp GTCCACAAATGTCAAGGAGCAGTCGGGGTGTGCCAGTaGGTCCCGGGAGCTCTAGAACCTTCTGCTCCGGAT +
Preference number: 6 (lower is better)
Translates to: VHKCQGAVGVCQ*VPGALEPSAPD
Trigger: ATCCGGAGCAGAAGGTTCTAGAGCTCCCGGGACTCACTGGCACACCCCGACTGCTCCTTGACATTTGTGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587129.5
CDS CAA 90 bp AATCACCTTGGCCTGTGGGCTAATGCCATAGCTGGTGAAGGCATATaGCCACTGGGGCAGGCCCAGGTGGGTGATGAGCAGGCGGTAATA +
Preference number: 6 (lower is better)
Translates to: NHLGLWANAIAGEGI*PLGQAQVGDEQAVI
Trigger: TATTACCGCCTGCTCATCACCCACCTGGGCCTGCCCCAGTGGCAATATGCCTTCACCAGCTATGGCATTAGCCCACAGGCCAAGGTGATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590652.5
CDS CAA 90 bp AGTTATCTTGGCCTGTGGGCTAATGCCATAGCTGGTGAAGGCATATaGCCACTGGGGCAGGCCCAGGTGGGTGATGAGCAGGCGGTAATA +
Preference number: 6 (lower is better)
Translates to: SYLGLWANAIAGEGI*PLGQAQVGDEQAVI
Trigger: TATTACCGCCTGCTCATCACCCACCTGGGCCTGCCCCAGTGGCAATATGCCTTCACCAGCTATGGCATTAGCCCACAGGCCAAGATAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590842.5
CDS TCA 72 bp CTATTTCTCCAACTTCTTGAGTTTGGAGTTGGCCTGTaGGTGCCTTGCCCTAGGATGCGCGTGATGCCCAGG +
Preference number: 6 (lower is better)
Translates to: LFLQLLEFGVGL*VPCPRMRVMPR
Trigger: CCTGGGCATCACGCGCATCCTAGGGCAAGGCACTCACAGGCCAACTCCAAACTCAAGAAGTTGGAGAAATAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585635.5
CDS CAA 72 bp CAAAACTCTTCTCAGTGTCCTCAGAAGCACCCTCGCTaGGAACGGCCTTCAGATCCTTTGGGCTTGGCCTGT +
Preference number: 6 (lower is better)
Translates to: QNSSQCPQKHPR*ERPSDPLGLAC
Trigger: ACAGGCCAAGCCCAAAGGATCTGAAGGCCGTTCCAAGCGAGGGTGCTTCTGAGGACACTGAGAAGAGTTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590258.2
ENST00000614939.4
CDS CAA 90 bp TCAGAATGGCAAAACTCTTCTCAGTGTCCTCAGAAGCACCCTCGCTaGGAACGGCCTTCAGATCCTTTGGGCTTGGCCTGTGGGCTAATG +
Preference number: 6 (lower is better)
Translates to: SEWQNSSQCPQKHPR*ERPSDPLGLACGLM
Trigger: CATTAGCCCACAGGCCAAGCCCAAAGGATCTGAAGGCCGTTCCAAGCGAGGGTGCTTCTGAGGACACTGAGAAGAGTTTTGCCATTCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590258.2
ENST00000614939.4
CDS TCA 72 bp TCTCTCAGCCAGGGAAATGTTCTCCTACAAGGAGGCTaGCTCACCATCCAGCTTCACACTCCATGTCATGTG +
Preference number: 6 (lower is better)
Translates to: SLSQGNVLLQGG*LTIQLHTPCHV
Trigger: CACATGACATGGAGTGTGAAGCTGGATGGTGAGTCAGCCTCCTTGTAGGAGAACATTTCCCTGGCTGAGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587511.1
CDS CCA 72 bp GAGAGTCAAAGTGAGGCTTCTCTGGCTGATCATCACTaGCATCCAGCTTCACACTCCATGTCATGTGGAAGC +
Preference number: 6 (lower is better)
Translates to: ESQSEASLADHH*HPASHSMSCGS
Trigger: GCTTCCACATGACATGGAGTGTGAAGCTGGATGCCAGTGATGATCAGCCAGAGAAGCCTCACTTTGACTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383056.7
ENST00000590500.5
CDS CAA 72 bp CATGATGGATGTGAACACCCCAGGAGAGCCTGGAACTaGCGAGAGTTGGGTCTGTACATTATAGACGGTTGT +
Preference number: 6 (lower is better)
Translates to: HDGCEHPRRAWN*RELGLYIIDGC
Trigger: ACAACCGTCTATAATGTACAGACCCAACTCTCGCAAGTTCCAGGCTCTCCTGGGGTGTTCACATCCATCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590652.5
CDS CCA 72 bp AAATATCACACTGCGAGAGTCAAAGTGAGGCTTCTCTaGCTGATCATCACTGGCATCCAGCTTCACACTCCA +
Preference number: 6 (lower is better)
Translates to: KYHTARVKVRLL*LIITGIQLHTP
Trigger: TGGAGTGTGAAGCTGGATGCCAGTGATGATCAGCCAGAGAAGCCTCACTTTGACTCTCGCAGTGTGATATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383056.7
ENST00000590500.5
CDS CAA 90 bp AAACCATCCAGATTCAAAGACTCAAAAGTCGAAGGGCCCTCAGAGTaGTCCCATTCAATCTCTCAGCCAGGGAAATGTTCTCCTACAAGG +
Preference number: 6 (lower is better)
Translates to: KPSRFKDSKVEGPSE*SHSISQPGKCSPTR
Trigger: CCTTGTAGGAGAACATTTCCCTGGCTGAGAGATTGAATGGGACAACTCTGAGGGCCCTTCGACTTTTGAGTCTTTGAATCTGGATGGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587511.1
CDS CCA 72 bp ATAGTACATGATGGATGTGAACACCCCAGGAGAGCCTaGAACTTGCGAGAGTTGGGTCTGTACATTATAGAC +
Preference number: 6 (lower is better)
Translates to: IVHDGCEHPRRA*NLRELGLYIID
Trigger: GTCTATAATGTACAGACCCAACTCTCGCAAGTTCCAGGCTCTCCTGGGGTGTTCACATCCATCATGTACTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590652.5
CDS CAA 72 bp GAACTTGCGAGAGTTGGGTCTGTACATTATAGACGGTaGTGTTTAATCACCTTGGCCTGTGGGCTAATGCCA +
Preference number: 6 (lower is better)
Translates to: ELARVGSVHYRR*CLITLACGLMP
Trigger: TGGCATTAGCCCACAGGCCAAGGTGATTAAACACAACCGTCTATAATGTACAGACCCAACTCTCGCAAGTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590652.5
CDS TCA 72 bp CTTCCCTGCATGCCCATAGCACTTCTCATTGAGAGGTaGGTCTATTTCTCCAACTTCTTGAGTTTGGAGTTG +
Preference number: 6 (lower is better)
Translates to: LPCMPIALLIER*VYFSNFLSLEL
Trigger: CAACTCCAAACTCAAGAAGTTGGAGAAATAGACTCACCTCTCAATGAGAAGTGCTATGGGCATGCAGGGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585635.5
CDS TCA 72 bp AAGAAATCATATGACGTTCAGCAGGAGGCTTTTCTATaGTGGTCACCTCAGTCACACCTGGGGAAGATTCTA +
Preference number: 6 (lower is better)
Translates to: KKSYDVQQEAFL*WSPQSHLGKIL
Trigger: TAGAATCTTCCCCAGGTGTGACTGAGGTGACCATCATAGAAAAGCCTCCTGCTGAACGTCATATGATTTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000334295.9
ENST00000383056.7
ENST00000587129.5
ENST00000587207.1
ENST00000587382.5
ENST00000587511.1
ENST00000589049.5
ENST00000590337.5
ENST00000590842.5
ENST00000591648.1
ENST00000593035.5
ENST00000610723.4
ENST00000614939.4
CDS CAA 72 bp TTTGGGATTACGATCTTGTTCTTGCTCTTAAACACTTaGCTGGGATCTAGCTTATTCACAAAGGAGTCGGTC +
Preference number: 6 (lower is better)
Translates to: FGITILFLLLNT*LGSSLFTKESV
Trigger: GACCGACTCCTTTGTGAATAAGCTAGATCCCAGCAAAGTGTTTAAGAGCAAGAACAAGATCGTAATCCCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334295.9
ENST00000383056.7
ENST00000593035.5
CDS TCA 72 bp ATACAGACTAGGAAGCTCCATGTTTTCTTTATTTGCTaGAAAAACATCCAGCTTCACACTCCATGTCATGTG +
Preference number: 6 (lower is better)
Translates to: IQTRKLHVFFIC*KNIQLHTPCHV
Trigger: CACATGACATGGAGTGTGAAGCTGGATGTTTTTTCAGCAAATAAAGAAAACATGGAGCTTCCTAGTCTGTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590337.5