RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TPD52L2 (Homo sapiens)

Ensembl gene IDs: ENSG00000101150

Ensembl transcript IDs: ENST00000217121.9, ENST00000346249.9, ENST00000348257.9, ENST00000351424.8, ENST00000352482.8, ENST00000358548.4, ENST00000369927.8, ENST00000474176.2, ENST00000611972.4, ENST00000615907.4

Found 246 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR GCA 90 bp CCAGAGGCTCAAGAGCCCTTTAGGGCAGGGCATAGGAGCCAGCGGGAGCTGCCACCTCAGGGCCGGCTCTaGTCATCCGCCCTGGCTGGC +
Preference number: 2 (lower is better)
Translates to: PEAQEPFRAGHRSQRELPPQGRL*SSALAG
Trigger: GCCAGCCAGGGCGGATGAGCAGAGCCGGCCCTGAGG...TGGCAGCTCCCGCTGGCTCCTATGCCCTGCCCTAAAGGGCTCTTGAGCCTCTGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000217121.9
ENST00000346249.9
ENST00000348257.9
ENST00000351424.8
ENST00000352482.8
ENST00000358548.4
ENST00000611972.4
3UTR-3UTR GCA 90 bp CCCTCCCATTCCCAGAGGCTCAAGAGCCCTTTAGGGCAGGGCATAGGAGCCAGCCCTCAGGGCCGGCTCTaGTCATCCGCCCTGGCTGGC +
Preference number: 2 (lower is better)
Translates to: PSHSQRLKSPLGQGIGASPQGRL*SSALAG
Trigger: GCCAGCCAGGGCGGATGAGCAGAGCCGGCCCTGAGG...GCTGGCTCCTATGCCCTGCCCTAAAGGGCTCTTGAGCCTCTGGGAATGGGAGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000217121.9
ENST00000346249.9
ENST00000348257.9
ENST00000351424.8
ENST00000352482.8
ENST00000358548.4
ENST00000611972.4
3UTR-3UTR GCA 90 bp CCATTCCCAGAGGCTCAAGAGCCCTTTAGGGCAGGGCATAGGAGCCAGCGGGAGCCTCAGGGCCGGCTCTaGTCATCCGCCCTGGCTGGC +
Preference number: 2 (lower is better)
Translates to: PFPEAQEPFRAGHRSQREPQGRL*SSALAG
Trigger: GCCAGCCAGGGCGGATGAGCAGAGCCGGCCCTGAGG...CTCCCGCTGGCTCCTATGCCCTGCCCTAAAGGGCTCTTGAGCCTCTGGGAATGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000217121.9
ENST00000346249.9
ENST00000348257.9
ENST00000351424.8
ENST00000352482.8
ENST00000358548.4
ENST00000611972.4
3UTR-3UTR GCA 90 bp CCCCTCCCATTCCCAGAGGCTCAAGAGCCCTTTAGGGCAGGGCATAGGAGCCAGCCTCAGGGCCGGCTCTaGTCATCCGCCCTGGCTGGC +
Preference number: 2 (lower is better)
Translates to: PLPFPEAQEPFRAGHRSQPQGRL*SSALAG
Trigger: GCCAGCCAGGGCGGATGAGCAGAGCCGGCCCTGAGG...CTGGCTCCTATGCCCTGCCCTAAAGGGCTCTTGAGCCTCTGGGAATGGGAGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000217121.9
ENST00000346249.9
ENST00000348257.9
ENST00000351424.8
ENST00000352482.8
ENST00000358548.4
ENST00000611972.4
3UTR-3UTR GCA 90 bp CGGCTCTGCTCATCCGCCCTGGCTGGCTGCTCCGCTGAACAGAGCTGCGGCTGTATGCTGAGGCTGGGTTaGGTGTGCTCTGCAGCGGGT +
Preference number: 2 (lower is better)
Translates to: RLCSSALAGCSAEQSCGCMLRLG*VCSAAG
Trigger: ACCCGCTGCAGAGCACACGCAACCCAGCCTCAGCAT...ACAGCCGCAGCTCTGTTCAGCGGAGCAGCCAGCCAGGGCGGATGAGCAGAGCCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000217121.9
ENST00000346249.9
ENST00000348257.9
ENST00000351424.8
ENST00000352482.8
ENST00000358548.4
ENST00000369927.8
ENST00000611972.4
3UTR-3UTR GCA 90 bp AGGCTCAAGAGCCCTTTAGGGCAGGGCATAGGAGCCAGCGGGAGCTGCCACGGTTCCGCCCTGGCTGGCTaGTCCGCTGAACAGAGCTGC +
Preference number: 2 (lower is better)
Translates to: RLKSPLGQGIGASGSCHGSALAG*SAEQSC
Trigger: GCAGCTCTGTTCAGCGGAGCAGCCAGCCAGGGCGGA...ACCGTGGCAGCTCCCGCTGGCTCCTATGCCCTGCCCTAAAGGGCTCTTGAGCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000217121.9
ENST00000346249.9
ENST00000348257.9
ENST00000351424.8
ENST00000352482.8
ENST00000358548.4
ENST00000611972.4
3UTR-3UTR GCA 90 bp CCAGAGGCTCAAGAGCCCTTTAGGGCAGGGCATAGGAGCCAGCGGGAGCTGCCATCCGCCCTGGCTGGCTaGTCCGCTGAACAGAGCTGC +
Preference number: 2 (lower is better)
Translates to: PEAQEPFRAGHRSQRELPSALAG*SAEQSC
Trigger: GCAGCTCTGTTCAGCGGAGCAGCCAGCCAGGGCGGA...TGGCAGCTCCCGCTGGCTCCTATGCCCTGCCCTAAAGGGCTCTTGAGCCTCTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000217121.9
ENST00000346249.9
ENST00000348257.9
ENST00000351424.8
ENST00000352482.8
ENST00000358548.4
ENST00000611972.4
3UTR-3UTR GCA 90 bp CCCCTCCCATTCCCAGAGGCTCAAGAGCCCTTTAGGGCAGGGCATAGGAGCCAGTCCGCCCTGGCTGGCTaGTCCGCTGAACAGAGCTGC +
Preference number: 2 (lower is better)
Translates to: PLPFPEAQEPFRAGHRSQSALAG*SAEQSC
Trigger: GCAGCTCTGTTCAGCGGAGCAGCCAGCCAGGGCGGA...CTGGCTCCTATGCCCTGCCCTAAAGGGCTCTTGAGCCTCTGGGAATGGGAGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000217121.9
ENST00000346249.9
ENST00000348257.9
ENST00000351424.8
ENST00000352482.8
ENST00000358548.4
ENST00000611972.4
3UTR-3UTR GCA 90 bp CCCTCCCATTCCCAGAGGCTCAAGAGCCCTTTAGGGCAGGGCATAGGAGCCAGCTCCGCCCTGGCTGGCTaGTCCGCTGAACAGAGCTGC +
Preference number: 2 (lower is better)
Translates to: PSHSQRLKSPLGQGIGASSALAG*SAEQSC
Trigger: GCAGCTCTGTTCAGCGGAGCAGCCAGCCAGGGCGGA...GCTGGCTCCTATGCCCTGCCCTAAAGGGCTCTTGAGCCTCTGGGAATGGGAGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000217121.9
ENST00000346249.9
ENST00000348257.9
ENST00000351424.8
ENST00000352482.8
ENST00000358548.4
ENST00000611972.4
3UTR-3UTR CCA 90 bp AGGCTCAAGAGCCCTTTAGGGCAGGGCATAGGAGCCAGCGGGAGCTGCCACGGTTCTGCTCATCCGCCCTaGCTGGCTGCTCCGCTGAAC +
Preference number: 2 (lower is better)
Translates to: RLKSPLGQGIGASGSCHGSAHPP*LAAPLN
Trigger: GTTCAGCGGAGCAGCCAGCCAGGGCGGATGAGCAGA...ACCGTGGCAGCTCCCGCTGGCTCCTATGCCCTGCCCTAAAGGGCTCTTGAGCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000217121.9
ENST00000346249.9
ENST00000348257.9
ENST00000351424.8
ENST00000352482.8
ENST00000358548.4
ENST00000611972.4
3UTR-3UTR GCA 90 bp AGGCTCAAGAGCCCTTTAGGGCAGGGCATAGGAGCCAGCGGGAGCTGCCACGGTATGCTGAGGCTGGGTTaGGTGTGCTCTGCAGCGGGT +
Preference number: 2 (lower is better)
Translates to: RLKSPLGQGIGASGSCHGMLRLG*VCSAAG
Trigger: ACCCGCTGCAGAGCACACGCAACCCAGCCTCAGCAT...ACCGTGGCAGCTCCCGCTGGCTCCTATGCCCTGCCCTAAAGGGCTCTTGAGCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000217121.9
ENST00000346249.9
ENST00000348257.9
ENST00000351424.8
ENST00000352482.8
ENST00000358548.4
ENST00000611972.4
3UTR-3UTR CCA 90 bp CCCCTCCCATTCCCAGAGGCTCAAGAGCCCTTTAGGGCAGGGCATAGGAGCCAGTCTGCTCATCCGCCCTaGCTGGCTGCTCCGCTGAAC +
Preference number: 2 (lower is better)
Translates to: PLPFPEAQEPFRAGHRSQSAHPP*LAAPLN
Trigger: GTTCAGCGGAGCAGCCAGCCAGGGCGGATGAGCAGA...CTGGCTCCTATGCCCTGCCCTAAAGGGCTCTTGAGCCTCTGGGAATGGGAGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000217121.9
ENST00000346249.9
ENST00000348257.9
ENST00000351424.8
ENST00000352482.8
ENST00000358548.4
ENST00000611972.4
3UTR-3UTR CCA 90 bp CCATTCCCAGAGGCTCAAGAGCCCTTTAGGGCAGGGCATAGGAGCCAGCGGGAGTCTGCTCATCCGCCCTaGCTGGCTGCTCCGCTGAAC +
Preference number: 2 (lower is better)
Translates to: PFPEAQEPFRAGHRSQRESAHPP*LAAPLN
Trigger: GTTCAGCGGAGCAGCCAGCCAGGGCGGATGAGCAGA...CTCCCGCTGGCTCCTATGCCCTGCCCTAAAGGGCTCTTGAGCCTCTGGGAATGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000217121.9
ENST00000346249.9
ENST00000348257.9
ENST00000351424.8
ENST00000352482.8
ENST00000358548.4
ENST00000611972.4
3UTR-3UTR CCA 90 bp CCCTCCCATTCCCAGAGGCTCAAGAGCCCTTTAGGGCAGGGCATAGGAGCCAGCTCTGCTCATCCGCCCTaGCTGGCTGCTCCGCTGAAC +
Preference number: 2 (lower is better)
Translates to: PSHSQRLKSPLGQGIGASSAHPP*LAAPLN
Trigger: GTTCAGCGGAGCAGCCAGCCAGGGCGGATGAGCAGA...GCTGGCTCCTATGCCCTGCCCTAAAGGGCTCTTGAGCCTCTGGGAATGGGAGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000217121.9
ENST00000346249.9
ENST00000348257.9
ENST00000351424.8
ENST00000352482.8
ENST00000358548.4
ENST00000611972.4
3UTR-3UTR CCA 90 bp CCAGAGGCTCAAGAGCCCTTTAGGGCAGGGCATAGGAGCCAGCGGGAGCTGCCAACATCTCCGCGTGGATaGGCAGGACTGTCCTCAGGG +
Preference number: 2 (lower is better)
Translates to: PEAQEPFRAGHRSQRELPTSPRG*AGLSSG
Trigger: CCCTGAGGACAGTCCTGCCCATCCACGCGGAGATGT...TGGCAGCTCCCGCTGGCTCCTATGCCCTGCCCTAAAGGGCTCTTGAGCCTCTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000217121.9
ENST00000346249.9
ENST00000348257.9
ENST00000351424.8
ENST00000352482.8
ENST00000358548.4
ENST00000611972.4
ENST00000615907.4
3UTR-3UTR GCA 90 bp CCATTCCCAGAGGCTCAAGAGCCCTTTAGGGCAGGGCATAGGAGCCAGCGGGAGATGCTGAGGCTGGGTTaGGTGTGCTCTGCAGCGGGT +
Preference number: 2 (lower is better)
Translates to: PFPEAQEPFRAGHRSQREMLRLG*VCSAAG
Trigger: ACCCGCTGCAGAGCACACGCAACCCAGCCTCAGCAT...CTCCCGCTGGCTCCTATGCCCTGCCCTAAAGGGCTCTTGAGCCTCTGGGAATGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000217121.9
ENST00000346249.9
ENST00000348257.9
ENST00000351424.8
ENST00000352482.8
ENST00000358548.4
ENST00000611972.4
3UTR-3UTR GCA 90 bp CCCCTCCCATTCCCAGAGGCTCAAGAGCCCTTTAGGGCAGGGCATAGGAGCCAGATGCTGAGGCTGGGTTaGGTGTGCTCTGCAGCGGGT +
Preference number: 2 (lower is better)
Translates to: PLPFPEAQEPFRAGHRSQMLRLG*VCSAAG
Trigger: ACCCGCTGCAGAGCACACGCAACCCAGCCTCAGCAT...CTGGCTCCTATGCCCTGCCCTAAAGGGCTCTTGAGCCTCTGGGAATGGGAGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000217121.9
ENST00000346249.9
ENST00000348257.9
ENST00000351424.8
ENST00000352482.8
ENST00000358548.4
ENST00000611972.4
3UTR-3UTR GCA 90 bp CCCTCCCATTCCCAGAGGCTCAAGAGCCCTTTAGGGCAGGGCATAGGAGCCAGCATGCTGAGGCTGGGTTaGGTGTGCTCTGCAGCGGGT +
Preference number: 2 (lower is better)
Translates to: PSHSQRLKSPLGQGIGASMLRLG*VCSAAG
Trigger: ACCCGCTGCAGAGCACACGCAACCCAGCCTCAGCAT...GCTGGCTCCTATGCCCTGCCCTAAAGGGCTCTTGAGCCTCTGGGAATGGGAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000217121.9
ENST00000346249.9
ENST00000348257.9
ENST00000351424.8
ENST00000352482.8
ENST00000358548.4
ENST00000611972.4
3UTR-3UTR TCA 90 bp AGGCTCAAGAGCCCTTTAGGGCAGGGCATAGGAGCCAGCGGGAGCTGCCACGGTCAATCAGGCAGCTGCTaGGGGTCAGTTTCCTTTCTG +
Preference number: 2 (lower is better)
Translates to: RLKSPLGQGIGASGSCHGQSGSC*GSVSFL
Trigger: CAGAAAGGAAACTGACCCTCAGCAGCTGCCTGATTG...ACCGTGGCAGCTCCCGCTGGCTCCTATGCCCTGCCCTAAAGGGCTCTTGAGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000217121.9
ENST00000346249.9
ENST00000348257.9
ENST00000351424.8
ENST00000352482.8
ENST00000358548.4
ENST00000611972.4
ENST00000615907.4
3UTR-3UTR TCA 90 bp CCAGAGGCTCAAGAGCCCTTTAGGGCAGGGCATAGGAGCCAGCGGGAGCTGCCACAATCAGGCAGCTGCTaGGGGTCAGTTTCCTTTCTG +
Preference number: 2 (lower is better)
Translates to: PEAQEPFRAGHRSQRELPQSGSC*GSVSFL
Trigger: CAGAAAGGAAACTGACCCTCAGCAGCTGCCTGATTG...TGGCAGCTCCCGCTGGCTCCTATGCCCTGCCCTAAAGGGCTCTTGAGCCTCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000217121.9
ENST00000346249.9
ENST00000348257.9
ENST00000351424.8
ENST00000352482.8
ENST00000358548.4
ENST00000611972.4
ENST00000615907.4
3UTR-3UTR TCA 90 bp CCATTCCCAGAGGCTCAAGAGCCCTTTAGGGCAGGGCATAGGAGCCAGCGGGAGCAATCAGGCAGCTGCTaGGGGTCAGTTTCCTTTCTG +
Preference number: 2 (lower is better)
Translates to: PFPEAQEPFRAGHRSQREQSGSC*GSVSFL
Trigger: CAGAAAGGAAACTGACCCTCAGCAGCTGCCTGATTG...CTCCCGCTGGCTCCTATGCCCTGCCCTAAAGGGCTCTTGAGCCTCTGGGAATGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000217121.9
ENST00000346249.9
ENST00000348257.9
ENST00000351424.8
ENST00000352482.8
ENST00000358548.4
ENST00000611972.4
ENST00000615907.4
3UTR-3UTR TCA 90 bp CCCTCCCATTCCCAGAGGCTCAAGAGCCCTTTAGGGCAGGGCATAGGAGCCAGCCAATCAGGCAGCTGCTaGGGGTCAGTTTCCTTTCTG +
Preference number: 2 (lower is better)
Translates to: PSHSQRLKSPLGQGIGASQSGSC*GSVSFL
Trigger: CAGAAAGGAAACTGACCCTCAGCAGCTGCCTGATTG...GCTGGCTCCTATGCCCTGCCCTAAAGGGCTCTTGAGCCTCTGGGAATGGGAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000217121.9
ENST00000346249.9
ENST00000348257.9
ENST00000351424.8
ENST00000352482.8
ENST00000358548.4
ENST00000611972.4
ENST00000615907.4
3UTR-3UTR CCA 90 bp CCAGAGGCTCAAGAGCCCTTTAGGGCAGGGCATAGGAGCCAGCGGGAGCTGCCAATAAAACACCTCAACTaGAAGAGGCTGCCACGCAGG +
Preference number: 2 (lower is better)
Translates to: PEAQEPFRAGHRSQRELPIKHLN*KRLPRR
Trigger: CCTGCGTGGCAGCCTCTTCCAGTTGAGGTGTTTTAT...TGGCAGCTCCCGCTGGCTCCTATGCCCTGCCCTAAAGGGCTCTTGAGCCTCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000217121.9
ENST00000346249.9
ENST00000348257.9
ENST00000351424.8
ENST00000352482.8
ENST00000358548.4
ENST00000611972.4
ENST00000615907.4
3UTR-3UTR CCA 90 bp AGGCTCAAGAGCCCTTTAGGGCAGGGCATAGGAGCCAGCGGGAGCTGCCACGGTATAAAACACCTCAACTaGAAGAGGCTGCCACGCAGG +
Preference number: 2 (lower is better)
Translates to: RLKSPLGQGIGASGSCHGIKHLN*KRLPRR
Trigger: CCTGCGTGGCAGCCTCTTCCAGTTGAGGTGTTTTAT...ACCGTGGCAGCTCCCGCTGGCTCCTATGCCCTGCCCTAAAGGGCTCTTGAGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000217121.9
ENST00000346249.9
ENST00000348257.9
ENST00000351424.8
ENST00000352482.8
ENST00000358548.4
ENST00000611972.4
ENST00000615907.4
3UTR-3UTR TCA 90 bp CCCTCCCATTCCCAGAGGCTCAAGAGCCCTTTAGGGCAGGGCATAGGAGCCAGCGGGATGGAGTGTGCGTaGCATAAAACACCTCAACTG +
Preference number: 2 (lower is better)
Translates to: PSHSQRLKSPLGQGIGASGMECA*HKTPQL
Trigger: CAGTTGAGGTGTTTTATGTCACGCACACTCCATCCC...GCTGGCTCCTATGCCCTGCCCTAAAGGGCTCTTGAGCCTCTGGGAATGGGAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000217121.9
ENST00000346249.9
ENST00000348257.9
ENST00000351424.8
ENST00000352482.8
ENST00000358548.4
ENST00000611972.4
ENST00000615907.4
3UTR-3UTR CCA 90 bp CCAGAGGCTCAAGAGCCCTTTAGGGCAGGGCATAGGAGCCAGCGGGAGCTGCCAGGTCAGTTTCCTTTCTaGGGGTCTCAGAAAATGGAC +
Preference number: 2 (lower is better)
Translates to: PEAQEPFRAGHRSQRELPGQFPF*GSQKMD
Trigger: GTCCATTTTCTGAGACCCCCAGAAAGGAAACTGACC...TGGCAGCTCCCGCTGGCTCCTATGCCCTGCCCTAAAGGGCTCTTGAGCCTCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000217121.9
ENST00000346249.9
ENST00000348257.9
ENST00000351424.8
ENST00000352482.8
ENST00000358548.4
ENST00000611972.4
ENST00000615907.4
3UTR-3UTR GCA 90 bp AGGCTCAAGAGCCCTTTAGGGCAGGGCATAGGAGCCAGCGGGAGCTGCCACGGTTGTTCTTCAAATTCATaGAAACGCGGCAGCCACATC +
Preference number: 2 (lower is better)
Translates to: RLKSPLGQGIGASGSCHGCSSNS*KRGSHI
Trigger: GATGTGGCTGCCGCGTTTGCATGAATTTGAAGAACA...ACCGTGGCAGCTCCCGCTGGCTCCTATGCCCTGCCCTAAAGGGCTCTTGAGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000217121.9
ENST00000346249.9
ENST00000348257.9
ENST00000351424.8
ENST00000352482.8
ENST00000358548.4
ENST00000611972.4
ENST00000615907.4
3UTR-3UTR CCA 90 bp CCATTCCCAGAGGCTCAAGAGCCCTTTAGGGCAGGGCATAGGAGCCAGCGGGAGGGTCAGTTTCCTTTCTaGGGGTCTCAGAAAATGGAC +
Preference number: 2 (lower is better)
Translates to: PFPEAQEPFRAGHRSQREGQFPF*GSQKMD
Trigger: GTCCATTTTCTGAGACCCCCAGAAAGGAAACTGACC...CTCCCGCTGGCTCCTATGCCCTGCCCTAAAGGGCTCTTGAGCCTCTGGGAATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000217121.9
ENST00000346249.9
ENST00000348257.9
ENST00000351424.8
ENST00000352482.8
ENST00000358548.4
ENST00000611972.4
ENST00000615907.4
3UTR-3UTR GCA 90 bp CCATTCCCAGAGGCTCAAGAGCCCTTTAGGGCAGGGCATAGGAGCCAGCGGGAGTGTTCTTCAAATTCATaGAAACGCGGCAGCCACATC +
Preference number: 2 (lower is better)
Translates to: PFPEAQEPFRAGHRSQRECSSNS*KRGSHI
Trigger: GATGTGGCTGCCGCGTTTGCATGAATTTGAAGAACA...CTCCCGCTGGCTCCTATGCCCTGCCCTAAAGGGCTCTTGAGCCTCTGGGAATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000217121.9
ENST00000346249.9
ENST00000348257.9
ENST00000351424.8
ENST00000352482.8
ENST00000358548.4
ENST00000611972.4
ENST00000615907.4
3UTR-3UTR GCA 90 bp CCCTCCCATTCCCAGAGGCTCAAGAGCCCTTTAGGGCAGGGCATAGGAGCCAGCTGTTCTTCAAATTCATaGAAACGCGGCAGCCACATC +
Preference number: 2 (lower is better)
Translates to: PSHSQRLKSPLGQGIGASCSSNS*KRGSHI
Trigger: GATGTGGCTGCCGCGTTTGCATGAATTTGAAGAACA...GCTGGCTCCTATGCCCTGCCCTAAAGGGCTCTTGAGCCTCTGGGAATGGGAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000217121.9
ENST00000346249.9
ENST00000348257.9
ENST00000351424.8
ENST00000352482.8
ENST00000358548.4
ENST00000611972.4
ENST00000615907.4
3UTR-3UTR GCA 90 bp CCCCTCCCATTCCCAGAGGCTCAAGAGCCCTTTAGGGCAGGGCATAGGAGCCAGTGTTCTTCAAATTCATaGAAACGCGGCAGCCACATC +
Preference number: 2 (lower is better)
Translates to: PLPFPEAQEPFRAGHRSQCSSNS*KRGSHI
Trigger: GATGTGGCTGCCGCGTTTGCATGAATTTGAAGAACA...CTGGCTCCTATGCCCTGCCCTAAAGGGCTCTTGAGCCTCTGGGAATGGGAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000217121.9
ENST00000346249.9
ENST00000348257.9
ENST00000351424.8
ENST00000352482.8
ENST00000358548.4
ENST00000611972.4
ENST00000615907.4
3UTR-3UTR CCA 90 bp CCAGAGGCTCAAGAGCCCTTTAGGGCAGGGCATAGGAGCCAGCGGGAGCTGCCATTTTGTACACTGGGATaGAGTGTGCGTGACATAAAA +
Preference number: 2 (lower is better)
Translates to: PEAQEPFRAGHRSQRELPFCTLG*SVRDIK
Trigger: TTTTATGTCACGCACACTCCATCCCAGTGTACAAAA...TGGCAGCTCCCGCTGGCTCCTATGCCCTGCCCTAAAGGGCTCTTGAGCCTCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000217121.9
ENST00000346249.9
ENST00000348257.9
ENST00000351424.8
ENST00000352482.8
ENST00000358548.4
ENST00000611972.4
ENST00000615907.4
3UTR-3UTR CCA 90 bp CCCTCCCATTCCCAGAGGCTCAAGAGCCCTTTAGGGCAGGGCATAGGAGCCAGCTTTTGTACACTGGGATaGAGTGTGCGTGACATAAAA +
Preference number: 2 (lower is better)
Translates to: PSHSQRLKSPLGQGIGASFCTLG*SVRDIK
Trigger: TTTTATGTCACGCACACTCCATCCCAGTGTACAAAA...GCTGGCTCCTATGCCCTGCCCTAAAGGGCTCTTGAGCCTCTGGGAATGGGAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000217121.9
ENST00000346249.9
ENST00000348257.9
ENST00000351424.8
ENST00000352482.8
ENST00000358548.4
ENST00000611972.4
ENST00000615907.4
CDS-3UTR GCA 90 bp CGGCTCTGCTCATCCGCCCTGGCTGGCTGCTCCGCTGAACAGAGCTGCGGCTGTCCTCAGGGCCGGCTCTaGTCATCCGCCCTGGCTGGC +
Preference number: 4 (lower is better)
Translates to: RLCSSALAGCSAEQSCGCPQGRL*SSALAG
Trigger: GCCAGCCAGGGCGGATGAGCAGAGCCGGCCCTGAGG...ACAGCCGCAGCTCTGTTCAGCGGAGCAGCCAGCCAGGGCGGATGAGCAGAGCCG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000217121.9
ENST00000346249.9
ENST00000348257.9
ENST00000351424.8
ENST00000352482.8
ENST00000358548.4
ENST00000369927.8
ENST00000611972.4
CDS-3UTR GCA 90 bp CGGCTCTGCTCATCCGCCCTGGCTGGCTGCTCCGCTGAACAGAGCTGCGGCTGTTCCGCCCTGGCTGGCTaGTCCGCTGAACAGAGCTGC +
Preference number: 4 (lower is better)
Translates to: RLCSSALAGCSAEQSCGCSALAG*SAEQSC
Trigger: GCAGCTCTGTTCAGCGGAGCAGCCAGCCAGGGCGGA...ACAGCCGCAGCTCTGTTCAGCGGAGCAGCCAGCCAGGGCGGATGAGCAGAGCCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000217121.9
ENST00000346249.9
ENST00000348257.9
ENST00000351424.8
ENST00000352482.8
ENST00000358548.4
ENST00000369927.8
ENST00000611972.4
CDS-3UTR GCA 90 bp AGGCTCAAGAGCCCTTTAGGGCAGGGCATAGGAGCCAGCGGGAGCTGCCACGGTCCTCAGGGCCGGCTCTaGTCATCCGCCCTGGCTGGC +
Preference number: 4 (lower is better)
Translates to: RLKSPLGQGIGASGSCHGPQGRL*SSALAG
Trigger: GCCAGCCAGGGCGGATGAGCAGAGCCGGCCCTGAGG...ACCGTGGCAGCTCCCGCTGGCTCCTATGCCCTGCCCTAAAGGGCTCTTGAGCCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000217121.9
ENST00000346249.9
ENST00000348257.9
ENST00000351424.8
ENST00000352482.8
ENST00000358548.4
ENST00000611972.4
ENST00000615907.4
CDS-3UTR GCA 90 bp CTCTGCTCATCCGCCCTGGCTGGCTGCTCCGCTGAACAGAGCTGCGGCTGTGATCCTCAGGGCCGGCTCTaGTCATCCGCCCTGGCTGGC +
Preference number: 4 (lower is better)
Translates to: LCSSALAGCSAEQSCGCDPQGRL*SSALAG
Trigger: GCCAGCCAGGGCGGATGAGCAGAGCCGGCCCTGAGG...ATCACAGCCGCAGCTCTGTTCAGCGGAGCAGCCAGCCAGGGCGGATGAGCAGAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000217121.9
ENST00000346249.9
ENST00000348257.9
ENST00000351424.8
ENST00000352482.8
ENST00000358548.4
ENST00000369927.8
ENST00000611972.4
CDS-3UTR GCA 90 bp CGGCTCTGCTCATCCGCCCTGGCTGGCTGCTCCGCTGAACAGAGCTGCGGCTGTCCACGCCATCTGACATaGAGGGCCCCGGTGTGCGAG +
Preference number: 4 (lower is better)
Translates to: RLCSSALAGCSAEQSCGCPRHLT*RAPVCE
Trigger: CTCGCACACCGGGGCCCTGCATGTCAGATGGCGTGG...ACAGCCGCAGCTCTGTTCAGCGGAGCAGCCAGCCAGGGCGGATGAGCAGAGCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000217121.9
ENST00000346249.9
ENST00000348257.9
ENST00000351424.8
ENST00000352482.8
ENST00000358548.4
ENST00000611972.4
CDS-3UTR TCA 90 bp CGGCTCTGCTCATCCGCCCTGGCTGGCTGCTCCGCTGAACAGAGCTGCGGCTGTATCCCCAAGGGTGTCTaGACTGTCCGGGGACACGGC +
Preference number: 4 (lower is better)
Translates to: RLCSSALAGCSAEQSCGCIPKGV*TVRGHG
Trigger: GCCGTGTCCCCGGACAGTTCAGACACCCTTGGGGAT...ACAGCCGCAGCTCTGTTCAGCGGAGCAGCCAGCCAGGGCGGATGAGCAGAGCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000217121.9
ENST00000346249.9
ENST00000348257.9
ENST00000351424.8
ENST00000352482.8
ENST00000358548.4
ENST00000611972.4
CDS-3UTR GCA 90 bp CTCTGCTCATCCGCCCTGGCTGGCTGCTCCGCTGAACAGAGCTGCGGCTGTGATTGCAGGGCCCCGGTGTaGGAGAGAGGCTGCTGGGGT +
Preference number: 4 (lower is better)
Translates to: LCSSALAGCSAEQSCGCDCRAPV*ERGCWG
Trigger: ACCCCAGCAGCCTCTCTCGCACACCGGGGCCCTGCA...ATCACAGCCGCAGCTCTGTTCAGCGGAGCAGCCAGCCAGGGCGGATGAGCAGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000217121.9
ENST00000346249.9
ENST00000348257.9
ENST00000351424.8
ENST00000352482.8
ENST00000358548.4
ENST00000611972.4
CDS-3UTR GCA 90 bp CCAGAGGCTCAAGAGCCCTTTAGGGCAGGGCATAGGAGCCAGCGGGAGCTGCCATGCAGGGCCCCGGTGTaGGAGAGAGGCTGCTGGGGT +
Preference number: 4 (lower is better)
Translates to: PEAQEPFRAGHRSQRELPCRAPV*ERGCWG
Trigger: ACCCCAGCAGCCTCTCTCGCACACCGGGGCCCTGCA...TGGCAGCTCCCGCTGGCTCCTATGCCCTGCCCTAAAGGGCTCTTGAGCCTCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000217121.9
ENST00000346249.9
ENST00000348257.9
ENST00000351424.8
ENST00000352482.8
ENST00000358548.4
ENST00000611972.4
ENST00000615907.4
CDS-3UTR GCA 90 bp AGGCTCAAGAGCCCTTTAGGGCAGGGCATAGGAGCCAGCGGGAGCTGCCACGGTTGCAGGGCCCCGGTGTaGGAGAGAGGCTGCTGGGGT +
Preference number: 4 (lower is better)
Translates to: RLKSPLGQGIGASGSCHGCRAPV*ERGCWG
Trigger: ACCCCAGCAGCCTCTCTCGCACACCGGGGCCCTGCA...ACCGTGGCAGCTCCCGCTGGCTCCTATGCCCTGCCCTAAAGGGCTCTTGAGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000217121.9
ENST00000346249.9
ENST00000348257.9
ENST00000351424.8
ENST00000352482.8
ENST00000358548.4
ENST00000611972.4
ENST00000615907.4
CDS-3UTR CCA 90 bp CGGCTCTGCTCATCCGCCCTGGCTGGCTGCTCCGCTGAACAGAGCTGCGGCTGTCACAGTGCCTCTCCTTaGCTGCCAGGACCTGGCGCA +
Preference number: 4 (lower is better)
Translates to: RLCSSALAGCSAEQSCGCHSASP*LPGPGA
Trigger: TGCGCCAGGTCCTGGCAGCCAAGGAGAGGCACTGTG...ACAGCCGCAGCTCTGTTCAGCGGAGCAGCCAGCCAGGGCGGATGAGCAGAGCCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000217121.9
ENST00000346249.9
ENST00000348257.9
ENST00000351424.8
ENST00000352482.8
ENST00000358548.4
ENST00000369927.8
ENST00000611972.4
CDS-3UTR CCA 90 bp CGGCTCTGCTCATCCGCCCTGGCTGGCTGCTCCGCTGAACAGAGCTGCGGCTGTTCTGCTCATCCGCCCTaGCTGGCTGCTCCGCTGAAC +
Preference number: 4 (lower is better)
Translates to: RLCSSALAGCSAEQSCGCSAHPP*LAAPLN
Trigger: GTTCAGCGGAGCAGCCAGCCAGGGCGGATGAGCAGA...ACAGCCGCAGCTCTGTTCAGCGGAGCAGCCAGCCAGGGCGGATGAGCAGAGCCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000217121.9
ENST00000346249.9
ENST00000348257.9
ENST00000351424.8
ENST00000352482.8
ENST00000358548.4
ENST00000369927.8
ENST00000611972.4
CDS-3UTR TCA 90 bp CGGCTCTGCTCATCCGCCCTGGCTGGCTGCTCCGCTGAACAGAGCTGCGGCTGTGTCACCACTCCCCGCTaGGGAAGGGAGGTTGTCACT +
Preference number: 4 (lower is better)
Translates to: RLCSSALAGCSAEQSCGCVTTPR*GREVVT
Trigger: AGTGACAACCTCCCTTCCTCAGCGGGGAGTGGTGAC...ACAGCCGCAGCTCTGTTCAGCGGAGCAGCCAGCCAGGGCGGATGAGCAGAGCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000217121.9
ENST00000346249.9
ENST00000348257.9
ENST00000351424.8
ENST00000352482.8
ENST00000358548.4
ENST00000369927.8
ENST00000611972.4
CDS-3UTR TCA 90 bp AGGCTCAAGAGCCCTTTAGGGCAGGGCATAGGAGCCAGCGGGAGCTGCCACGGTGCAGACCACGCCATCTaGCATGCAGGGCCCCGGTGT +
Preference number: 4 (lower is better)
Translates to: RLKSPLGQGIGASGSCHGADHAI*HAGPRC
Trigger: ACACCGGGGCCCTGCATGTCAGATGGCGTGGTCTGC...ACCGTGGCAGCTCCCGCTGGCTCCTATGCCCTGCCCTAAAGGGCTCTTGAGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000217121.9
ENST00000346249.9
ENST00000348257.9
ENST00000351424.8
ENST00000352482.8
ENST00000358548.4
ENST00000611972.4
ENST00000615907.4
CDS-3UTR GCA 90 bp CTCTGCTCATCCGCCCTGGCTGGCTGCTCCGCTGAACAGAGCTGCGGCTGTGATTCCGCCCTGGCTGGCTaGTCCGCTGAACAGAGCTGC +
Preference number: 4 (lower is better)
Translates to: LCSSALAGCSAEQSCGCDSALAG*SAEQSC
Trigger: GCAGCTCTGTTCAGCGGAGCAGCCAGCCAGGGCGGA...ATCACAGCCGCAGCTCTGTTCAGCGGAGCAGCCAGCCAGGGCGGATGAGCAGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000217121.9
ENST00000346249.9
ENST00000348257.9
ENST00000351424.8
ENST00000352482.8
ENST00000358548.4
ENST00000369927.8
ENST00000611972.4
CDS-3UTR GCA 90 bp CCATTCCCAGAGGCTCAAGAGCCCTTTAGGGCAGGGCATAGGAGCCAGCGGGAGTGCAGGGCCCCGGTGTaGGAGAGAGGCTGCTGGGGT +
Preference number: 4 (lower is better)
Translates to: PFPEAQEPFRAGHRSQRECRAPV*ERGCWG
Trigger: ACCCCAGCAGCCTCTCTCGCACACCGGGGCCCTGCA...CTCCCGCTGGCTCCTATGCCCTGCCCTAAAGGGCTCTTGAGCCTCTGGGAATGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000217121.9
ENST00000346249.9
ENST00000348257.9
ENST00000351424.8
ENST00000352482.8
ENST00000358548.4
ENST00000611972.4
ENST00000615907.4
CDS-3UTR GCA 90 bp CCCCTCCCATTCCCAGAGGCTCAAGAGCCCTTTAGGGCAGGGCATAGGAGCCAGTGCAGGGCCCCGGTGTaGGAGAGAGGCTGCTGGGGT +
Preference number: 4 (lower is better)
Translates to: PLPFPEAQEPFRAGHRSQCRAPV*ERGCWG
Trigger: ACCCCAGCAGCCTCTCTCGCACACCGGGGCCCTGCA...CTGGCTCCTATGCCCTGCCCTAAAGGGCTCTTGAGCCTCTGGGAATGGGAGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000217121.9
ENST00000346249.9
ENST00000348257.9
ENST00000351424.8
ENST00000352482.8
ENST00000358548.4
ENST00000611972.4
ENST00000615907.4
CDS-3UTR GCA 90 bp CCAGAGGCTCAAGAGCCCTTTAGGGCAGGGCATAGGAGCCAGCGGGAGCTGCCACCACGCCATCTGACATaGAGGGCCCCGGTGTGCGAG +
Preference number: 4 (lower is better)
Translates to: PEAQEPFRAGHRSQRELPPRHLT*RAPVCE
Trigger: CTCGCACACCGGGGCCCTGCATGTCAGATGGCGTGG...TGGCAGCTCCCGCTGGCTCCTATGCCCTGCCCTAAAGGGCTCTTGAGCCTCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000217121.9
ENST00000346249.9
ENST00000348257.9
ENST00000351424.8
ENST00000352482.8
ENST00000358548.4
ENST00000611972.4
ENST00000615907.4
CDS-3UTR GCA 90 bp CTCTGCTCATCCGCCCTGGCTGGCTGCTCCGCTGAACAGAGCTGCGGCTGTGATCCACGCCATCTGACATaGAGGGCCCCGGTGTGCGAG +
Preference number: 4 (lower is better)
Translates to: LCSSALAGCSAEQSCGCDPRHLT*RAPVCE
Trigger: CTCGCACACCGGGGCCCTGCATGTCAGATGGCGTGG...ATCACAGCCGCAGCTCTGTTCAGCGGAGCAGCCAGCCAGGGCGGATGAGCAGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000217121.9
ENST00000346249.9
ENST00000348257.9
ENST00000351424.8
ENST00000352482.8
ENST00000358548.4
ENST00000611972.4
CDS-3UTR GCA 90 bp CGGCTCTGCTCATCCGCCCTGGCTGGCTGCTCCGCTGAACAGAGCTGCGGCTGTGCACAGAGCTCCCCCTaGAGACCACGCCATCTGACA +
Preference number: 4 (lower is better)
Translates to: RLCSSALAGCSAEQSCGCAQSSP*RPRHLT
Trigger: TGTCAGATGGCGTGGTCTGCAGGGGGAGCTCTGTGC...ACAGCCGCAGCTCTGTTCAGCGGAGCAGCCAGCCAGGGCGGATGAGCAGAGCCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000217121.9
ENST00000346249.9
ENST00000348257.9
ENST00000351424.8
ENST00000352482.8
ENST00000358548.4
ENST00000611972.4
CDS-3UTR GCA 90 bp CGGCTCTGCTCATCCGCCCTGGCTGGCTGCTCCGCTGAACAGAGCTGCGGCTGTGGCTTCCCTGGCCCCTaGATCTCTGTCGTGTGTGGA +
Preference number: 4 (lower is better)
Translates to: RLCSSALAGCSAEQSCGCGFPGP*ISVVCG
Trigger: TCCACACACGACAGAGATGCAGGGGCCAGGGAAGCC...ACAGCCGCAGCTCTGTTCAGCGGAGCAGCCAGCCAGGGCGGATGAGCAGAGCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000217121.9
ENST00000346249.9
ENST00000348257.9
ENST00000351424.8
ENST00000352482.8
ENST00000358548.4
ENST00000611972.4
CDS-3UTR GCA 90 bp CGGCTCTGCTCATCCGCCCTGGCTGGCTGCTCCGCTGAACAGAGCTGCGGCTGTACTAGCCAGCGGAACTaGCTCAGCTCCGCGGCGTTT +
Preference number: 4 (lower is better)
Translates to: RLCSSALAGCSAEQSCGCTSQRN*LSSAAF
Trigger: AAACGCCGCGGAGCTGAGGCAGTTCCGCTGGCTAGT...ACAGCCGCAGCTCTGTTCAGCGGAGCAGCCAGCCAGGGCGGATGAGCAGAGCCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369927.8
ENST00000611972.4
CDS-3UTR CCA 90 bp CGGCTCTGCTCATCCGCCCTGGCTGGCTGCTCCGCTGAACAGAGCTGCGGCTGTACATCTCCGCGTGGATaGGCAGGACTGTCCTCAGGG +
Preference number: 4 (lower is better)
Translates to: RLCSSALAGCSAEQSCGCTSPRG*AGLSSG
Trigger: CCCTGAGGACAGTCCTGCCCATCCACGCGGAGATGT...ACAGCCGCAGCTCTGTTCAGCGGAGCAGCCAGCCAGGGCGGATGAGCAGAGCCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000217121.9
ENST00000346249.9
ENST00000348257.9
ENST00000351424.8
ENST00000352482.8
ENST00000358548.4
ENST00000369927.8
ENST00000611972.4
CDS-3UTR CCA 90 bp CTCTGCTCATCCGCCCTGGCTGGCTGCTCCGCTGAACAGAGCTGCGGCTGTGATCGGGCAGCCACACCTTaGCCGGCGGAGTCCATGTTC +
Preference number: 4 (lower is better)
Translates to: LCSSALAGCSAEQSCGCDRAATP*PAESMF
Trigger: GAACATGGACTCCGCCGGCCAAGGTGTGGCTGCCCG...ATCACAGCCGCAGCTCTGTTCAGCGGAGCAGCCAGCCAGGGCGGATGAGCAGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369927.8
CDS-3UTR TCA 90 bp CGGCTCTGCTCATCCGCCCTGGCTGGCTGCTCCGCTGAACAGAGCTGCGGCTGTTGTGGACAGGGCAGCTaGAGTCTTCTGTCCTGCCTG +
Preference number: 4 (lower is better)
Translates to: RLCSSALAGCSAEQSCGCCGQGS*SLLSCL
Trigger: CAGGCAGGACAGAAGACTTCAGCTGCCCTGTCCACA...ACAGCCGCAGCTCTGTTCAGCGGAGCAGCCAGCCAGGGCGGATGAGCAGAGCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000217121.9
ENST00000346249.9
ENST00000348257.9
ENST00000351424.8
ENST00000352482.8
ENST00000358548.4
ENST00000369927.8
CDS-3UTR TCA 90 bp CCCCTCCCATTCCCAGAGGCTCAAGAGCCCTTTAGGGCAGGGCATAGGAGCCAGGCAGACCACGCCATCTaGCATGCAGGGCCCCGGTGT +
Preference number: 4 (lower is better)
Translates to: PLPFPEAQEPFRAGHRSQADHAI*HAGPRC
Trigger: ACACCGGGGCCCTGCATGTCAGATGGCGTGGTCTGC...CTGGCTCCTATGCCCTGCCCTAAAGGGCTCTTGAGCCTCTGGGAATGGGAGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000217121.9
ENST00000346249.9
ENST00000348257.9
ENST00000351424.8
ENST00000352482.8
ENST00000358548.4
ENST00000611972.4
ENST00000615907.4
CDS-3UTR TCA 90 bp CCATTCCCAGAGGCTCAAGAGCCCTTTAGGGCAGGGCATAGGAGCCAGCGGGAGGCAGACCACGCCATCTaGCATGCAGGGCCCCGGTGT +
Preference number: 4 (lower is better)
Translates to: PFPEAQEPFRAGHRSQREADHAI*HAGPRC
Trigger: ACACCGGGGCCCTGCATGTCAGATGGCGTGGTCTGC...CTCCCGCTGGCTCCTATGCCCTGCCCTAAAGGGCTCTTGAGCCTCTGGGAATGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000217121.9
ENST00000346249.9
ENST00000348257.9
ENST00000351424.8
ENST00000352482.8
ENST00000358548.4
ENST00000611972.4
ENST00000615907.4
CDS-3UTR TCA 90 bp CCCTCCCATTCCCAGAGGCTCAAGAGCCCTTTAGGGCAGGGCATAGGAGCCAGCGCAGACCACGCCATCTaGCATGCAGGGCCCCGGTGT +
Preference number: 4 (lower is better)
Translates to: PSHSQRLKSPLGQGIGASADHAI*HAGPRC
Trigger: ACACCGGGGCCCTGCATGTCAGATGGCGTGGTCTGC...GCTGGCTCCTATGCCCTGCCCTAAAGGGCTCTTGAGCCTCTGGGAATGGGAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000217121.9
ENST00000346249.9
ENST00000348257.9
ENST00000351424.8
ENST00000352482.8
ENST00000358548.4
ENST00000611972.4
ENST00000615907.4
CDS-3UTR TCA 90 bp AGGCTCAAGAGCCCTTTAGGGCAGGGCATAGGAGCCAGCGGGAGCTGCCACGGTATCCCCAAGGGTGTCTaGACTGTCCGGGGACACGGC +
Preference number: 4 (lower is better)
Translates to: RLKSPLGQGIGASGSCHGIPKGV*TVRGHG
Trigger: GCCGTGTCCCCGGACAGTTCAGACACCCTTGGGGAT...ACCGTGGCAGCTCCCGCTGGCTCCTATGCCCTGCCCTAAAGGGCTCTTGAGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000217121.9
ENST00000346249.9
ENST00000348257.9
ENST00000351424.8
ENST00000352482.8
ENST00000358548.4
ENST00000611972.4
ENST00000615907.4
CDS-3UTR TCA 90 bp CTCTGCTCATCCGCCCTGGCTGGCTGCTCCGCTGAACAGAGCTGCGGCTGTGATATCCCCAAGGGTGTCTaGACTGTCCGGGGACACGGC +
Preference number: 4 (lower is better)
Translates to: LCSSALAGCSAEQSCGCDIPKGV*TVRGHG
Trigger: GCCGTGTCCCCGGACAGTTCAGACACCCTTGGGGAT...ATCACAGCCGCAGCTCTGTTCAGCGGAGCAGCCAGCCAGGGCGGATGAGCAGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000217121.9
ENST00000346249.9
ENST00000348257.9
ENST00000351424.8
ENST00000352482.8
ENST00000358548.4
ENST00000611972.4
CDS-3UTR GCA 90 bp AGGCTCAAGAGCCCTTTAGGGCAGGGCATAGGAGCCAGCGGGAGCTGCCACGGTGTGCCTCTCCTTGGCTaGCAGGACCTGGCGCAGAGT +
Preference number: 4 (lower is better)
Translates to: RLKSPLGQGIGASGSCHGVPLLG*QDLAQS
Trigger: ACTCTGCGCCAGGTCCTGGCAGCCAAGGAGAGGCAC...ACCGTGGCAGCTCCCGCTGGCTCCTATGCCCTGCCCTAAAGGGCTCTTGAGCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000217121.9
ENST00000346249.9
ENST00000348257.9
ENST00000351424.8
ENST00000352482.8
ENST00000358548.4
ENST00000611972.4
ENST00000615907.4
CDS-3UTR GCA 90 bp CTCTGCTCATCCGCCCTGGCTGGCTGCTCCGCTGAACAGAGCTGCGGCTGTGATGTGCCTCTCCTTGGCTaGCAGGACCTGGCGCAGAGT +
Preference number: 4 (lower is better)
Translates to: LCSSALAGCSAEQSCGCDVPLLG*QDLAQS
Trigger: ACTCTGCGCCAGGTCCTGGCAGCCAAGGAGAGGCAC...ATCACAGCCGCAGCTCTGTTCAGCGGAGCAGCCAGCCAGGGCGGATGAGCAGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000217121.9
ENST00000346249.9
ENST00000348257.9
ENST00000351424.8
ENST00000352482.8
ENST00000358548.4
ENST00000369927.8
ENST00000611972.4
CDS-3UTR GCA 90 bp CCATTCCCAGAGGCTCAAGAGCCCTTTAGGGCAGGGCATAGGAGCCAGCGGGAGTCCGCCCTGGCTGGCTaGTCCGCTGAACAGAGCTGC +
Preference number: 4 (lower is better)
Translates to: PFPEAQEPFRAGHRSQRESALAG*SAEQSC
Trigger: GCAGCTCTGTTCAGCGGAGCAGCCAGCCAGGGCGGA...CTCCCGCTGGCTCCTATGCCCTGCCCTAAAGGGCTCTTGAGCCTCTGGGAATGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000217121.9
ENST00000346249.9
ENST00000348257.9
ENST00000351424.8
ENST00000352482.8
ENST00000358548.4
ENST00000611972.4
ENST00000615907.4
CDS-3UTR GCA 90 bp CCATTCCCAGAGGCTCAAGAGCCCTTTAGGGCAGGGCATAGGAGCCAGCGGGAGCCACGCCATCTGACATaGAGGGCCCCGGTGTGCGAG +
Preference number: 4 (lower is better)
Translates to: PFPEAQEPFRAGHRSQREPRHLT*RAPVCE
Trigger: CTCGCACACCGGGGCCCTGCATGTCAGATGGCGTGG...CTCCCGCTGGCTCCTATGCCCTGCCCTAAAGGGCTCTTGAGCCTCTGGGAATGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000217121.9
ENST00000346249.9
ENST00000348257.9
ENST00000351424.8
ENST00000352482.8
ENST00000358548.4
ENST00000611972.4
ENST00000615907.4
CDS-3UTR GCA 90 bp CCCTCCCATTCCCAGAGGCTCAAGAGCCCTTTAGGGCAGGGCATAGGAGCCAGCCCACGCCATCTGACATaGAGGGCCCCGGTGTGCGAG +
Preference number: 4 (lower is better)
Translates to: PSHSQRLKSPLGQGIGASPRHLT*RAPVCE
Trigger: CTCGCACACCGGGGCCCTGCATGTCAGATGGCGTGG...GCTGGCTCCTATGCCCTGCCCTAAAGGGCTCTTGAGCCTCTGGGAATGGGAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000217121.9
ENST00000346249.9
ENST00000348257.9
ENST00000351424.8
ENST00000352482.8
ENST00000358548.4
ENST00000611972.4
ENST00000615907.4
CDS-3UTR GCA 90 bp CCCCTCCCATTCCCAGAGGCTCAAGAGCCCTTTAGGGCAGGGCATAGGAGCCAGCCACGCCATCTGACATaGAGGGCCCCGGTGTGCGAG +
Preference number: 4 (lower is better)
Translates to: PLPFPEAQEPFRAGHRSQPRHLT*RAPVCE
Trigger: CTCGCACACCGGGGCCCTGCATGTCAGATGGCGTGG...CTGGCTCCTATGCCCTGCCCTAAAGGGCTCTTGAGCCTCTGGGAATGGGAGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000217121.9
ENST00000346249.9
ENST00000348257.9
ENST00000351424.8
ENST00000352482.8
ENST00000358548.4
ENST00000611972.4
ENST00000615907.4
CDS-3UTR GCA 90 bp CGGCTCTGCTCATCCGCCCTGGCTGGCTGCTCCGCTGAACAGAGCTGCGGCTGTAACACCCGCACAACCTaGCTTCTCACCACACCCCAC +
Preference number: 4 (lower is better)
Translates to: RLCSSALAGCSAEQSCGCNTRTT*LLTTPH
Trigger: GTGGGGTGTGGTGAGAAGGCAGGTTGTGCGGGTGTT...ACAGCCGCAGCTCTGTTCAGCGGAGCAGCCAGCCAGGGCGGATGAGCAGAGCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000217121.9
ENST00000346249.9
ENST00000348257.9
ENST00000351424.8
ENST00000352482.8
ENST00000358548.4
ENST00000611972.4
CDS-3UTR CCA 90 bp AGGCTCAAGAGCCCTTTAGGGCAGGGCATAGGAGCCAGCGGGAGCTGCCACGGTCACAGTGCCTCTCCTTaGCTGCCAGGACCTGGCGCA +
Preference number: 4 (lower is better)
Translates to: RLKSPLGQGIGASGSCHGHSASP*LPGPGA
Trigger: TGCGCCAGGTCCTGGCAGCCAAGGAGAGGCACTGTG...ACCGTGGCAGCTCCCGCTGGCTCCTATGCCCTGCCCTAAAGGGCTCTTGAGCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000217121.9
ENST00000346249.9
ENST00000348257.9
ENST00000351424.8
ENST00000352482.8
ENST00000358548.4
ENST00000611972.4
ENST00000615907.4
CDS-3UTR CCA 90 bp CTCTGCTCATCCGCCCTGGCTGGCTGCTCCGCTGAACAGAGCTGCGGCTGTGATCACAGTGCCTCTCCTTaGCTGCCAGGACCTGGCGCA +
Preference number: 4 (lower is better)
Translates to: LCSSALAGCSAEQSCGCDHSASP*LPGPGA
Trigger: TGCGCCAGGTCCTGGCAGCCAAGGAGAGGCACTGTG...ATCACAGCCGCAGCTCTGTTCAGCGGAGCAGCCAGCCAGGGCGGATGAGCAGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000217121.9
ENST00000346249.9
ENST00000348257.9
ENST00000351424.8
ENST00000352482.8
ENST00000358548.4
ENST00000369927.8
ENST00000611972.4
CDS-3UTR CCA 90 bp CCAGAGGCTCAAGAGCCCTTTAGGGCAGGGCATAGGAGCCAGCGGGAGCTGCCATCTGCTCATCCGCCCTaGCTGGCTGCTCCGCTGAAC +
Preference number: 4 (lower is better)
Translates to: PEAQEPFRAGHRSQRELPSAHPP*LAAPLN
Trigger: GTTCAGCGGAGCAGCCAGCCAGGGCGGATGAGCAGA...TGGCAGCTCCCGCTGGCTCCTATGCCCTGCCCTAAAGGGCTCTTGAGCCTCTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000217121.9
ENST00000346249.9
ENST00000348257.9
ENST00000351424.8
ENST00000352482.8
ENST00000358548.4
ENST00000611972.4
ENST00000615907.4
CDS-3UTR CCA 90 bp CTCTGCTCATCCGCCCTGGCTGGCTGCTCCGCTGAACAGAGCTGCGGCTGTGATTCTGCTCATCCGCCCTaGCTGGCTGCTCCGCTGAAC +
Preference number: 4 (lower is better)
Translates to: LCSSALAGCSAEQSCGCDSAHPP*LAAPLN
Trigger: GTTCAGCGGAGCAGCCAGCCAGGGCGGATGAGCAGA...ATCACAGCCGCAGCTCTGTTCAGCGGAGCAGCCAGCCAGGGCGGATGAGCAGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000217121.9
ENST00000346249.9
ENST00000348257.9
ENST00000351424.8
ENST00000352482.8
ENST00000358548.4
ENST00000369927.8
ENST00000611972.4
CDS-3UTR TCA 90 bp CGGCTCTGCTCATCCGCCCTGGCTGGCTGCTCCGCTGAACAGAGCTGCGGCTGTGGACCTGGCGCAGAGTaGCAATTTCCTCTTCCACCT +
Preference number: 4 (lower is better)
Translates to: RLCSSALAGCSAEQSCGCGPGAE*QFPLPP
Trigger: AGGTGGAAGAGGAAATTGTCACTCTGCGCCAGGTCC...ACAGCCGCAGCTCTGTTCAGCGGAGCAGCCAGCCAGGGCGGATGAGCAGAGCCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000217121.9
ENST00000346249.9
ENST00000348257.9
ENST00000351424.8
ENST00000352482.8
ENST00000358548.4
ENST00000369927.8
ENST00000611972.4
CDS-3UTR TCA 90 bp CCAGAGGCTCAAGAGCCCTTTAGGGCAGGGCATAGGAGCCAGCGGGAGCTGCCAGTCACCACTCCCCGCTaGGGAAGGGAGGTTGTCACT +
Preference number: 4 (lower is better)
Translates to: PEAQEPFRAGHRSQRELPVTTPR*GREVVT
Trigger: AGTGACAACCTCCCTTCCTCAGCGGGGAGTGGTGAC...TGGCAGCTCCCGCTGGCTCCTATGCCCTGCCCTAAAGGGCTCTTGAGCCTCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000217121.9
ENST00000346249.9
ENST00000348257.9
ENST00000351424.8
ENST00000352482.8
ENST00000358548.4
ENST00000611972.4
ENST00000615907.4
CDS-3UTR TCA 90 bp AGGCTCAAGAGCCCTTTAGGGCAGGGCATAGGAGCCAGCGGGAGCTGCCACGGTGTCACCACTCCCCGCTaGGGAAGGGAGGTTGTCACT +
Preference number: 4 (lower is better)
Translates to: RLKSPLGQGIGASGSCHGVTTPR*GREVVT
Trigger: AGTGACAACCTCCCTTCCTCAGCGGGGAGTGGTGAC...ACCGTGGCAGCTCCCGCTGGCTCCTATGCCCTGCCCTAAAGGGCTCTTGAGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000217121.9
ENST00000346249.9
ENST00000348257.9
ENST00000351424.8
ENST00000352482.8
ENST00000358548.4
ENST00000611972.4
ENST00000615907.4
CDS-3UTR TCA 90 bp CTCTGCTCATCCGCCCTGGCTGGCTGCTCCGCTGAACAGAGCTGCGGCTGTGATGTCACCACTCCCCGCTaGGGAAGGGAGGTTGTCACT +
Preference number: 4 (lower is better)
Translates to: LCSSALAGCSAEQSCGCDVTTPR*GREVVT
Trigger: AGTGACAACCTCCCTTCCTCAGCGGGGAGTGGTGAC...ATCACAGCCGCAGCTCTGTTCAGCGGAGCAGCCAGCCAGGGCGGATGAGCAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000217121.9
ENST00000346249.9
ENST00000348257.9
ENST00000351424.8
ENST00000352482.8
ENST00000358548.4
ENST00000369927.8
ENST00000611972.4
CDS-3UTR TCA 90 bp CCCCTCCCATTCCCAGAGGCTCAAGAGCCCTTTAGGGCAGGGCATAGGAGCCAGATCCCCAAGGGTGTCTaGACTGTCCGGGGACACGGC +
Preference number: 4 (lower is better)
Translates to: PLPFPEAQEPFRAGHRSQIPKGV*TVRGHG
Trigger: GCCGTGTCCCCGGACAGTTCAGACACCCTTGGGGAT...CTGGCTCCTATGCCCTGCCCTAAAGGGCTCTTGAGCCTCTGGGAATGGGAGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000217121.9
ENST00000346249.9
ENST00000348257.9
ENST00000351424.8
ENST00000352482.8
ENST00000358548.4
ENST00000611972.4
ENST00000615907.4
CDS-3UTR TCA 90 bp CCATTCCCAGAGGCTCAAGAGCCCTTTAGGGCAGGGCATAGGAGCCAGCGGGAGATCCCCAAGGGTGTCTaGACTGTCCGGGGACACGGC +
Preference number: 4 (lower is better)
Translates to: PFPEAQEPFRAGHRSQREIPKGV*TVRGHG
Trigger: GCCGTGTCCCCGGACAGTTCAGACACCCTTGGGGAT...CTCCCGCTGGCTCCTATGCCCTGCCCTAAAGGGCTCTTGAGCCTCTGGGAATGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000217121.9
ENST00000346249.9
ENST00000348257.9
ENST00000351424.8
ENST00000352482.8
ENST00000358548.4
ENST00000611972.4
ENST00000615907.4
CDS-3UTR TCA 90 bp CCCTCCCATTCCCAGAGGCTCAAGAGCCCTTTAGGGCAGGGCATAGGAGCCAGCATCCCCAAGGGTGTCTaGACTGTCCGGGGACACGGC +
Preference number: 4 (lower is better)
Translates to: PSHSQRLKSPLGQGIGASIPKGV*TVRGHG
Trigger: GCCGTGTCCCCGGACAGTTCAGACACCCTTGGGGAT...GCTGGCTCCTATGCCCTGCCCTAAAGGGCTCTTGAGCCTCTGGGAATGGGAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000217121.9
ENST00000346249.9
ENST00000348257.9
ENST00000351424.8
ENST00000352482.8
ENST00000358548.4
ENST00000611972.4
ENST00000615907.4
CDS-3UTR GCA 90 bp CCCCTCCCATTCCCAGAGGCTCAAGAGCCCTTTAGGGCAGGGCATAGGAGCCAGGTGCCTCTCCTTGGCTaGCAGGACCTGGCGCAGAGT +
Preference number: 4 (lower is better)
Translates to: PLPFPEAQEPFRAGHRSQVPLLG*QDLAQS
Trigger: ACTCTGCGCCAGGTCCTGGCAGCCAAGGAGAGGCAC...CTGGCTCCTATGCCCTGCCCTAAAGGGCTCTTGAGCCTCTGGGAATGGGAGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000217121.9
ENST00000346249.9
ENST00000348257.9
ENST00000351424.8
ENST00000352482.8
ENST00000358548.4
ENST00000611972.4
ENST00000615907.4
CDS-3UTR GCA 90 bp CCCTCCCATTCCCAGAGGCTCAAGAGCCCTTTAGGGCAGGGCATAGGAGCCAGCGTGCCTCTCCTTGGCTaGCAGGACCTGGCGCAGAGT +
Preference number: 4 (lower is better)
Translates to: PSHSQRLKSPLGQGIGASVPLLG*QDLAQS
Trigger: ACTCTGCGCCAGGTCCTGGCAGCCAAGGAGAGGCAC...GCTGGCTCCTATGCCCTGCCCTAAAGGGCTCTTGAGCCTCTGGGAATGGGAGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000217121.9
ENST00000346249.9
ENST00000348257.9
ENST00000351424.8
ENST00000352482.8
ENST00000358548.4
ENST00000611972.4
ENST00000615907.4
CDS-3UTR GCA 90 bp CCATTCCCAGAGGCTCAAGAGCCCTTTAGGGCAGGGCATAGGAGCCAGCGGGAGGTGCCTCTCCTTGGCTaGCAGGACCTGGCGCAGAGT +
Preference number: 4 (lower is better)
Translates to: PFPEAQEPFRAGHRSQREVPLLG*QDLAQS
Trigger: ACTCTGCGCCAGGTCCTGGCAGCCAAGGAGAGGCAC...CTCCCGCTGGCTCCTATGCCCTGCCCTAAAGGGCTCTTGAGCCTCTGGGAATGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000217121.9
ENST00000346249.9
ENST00000348257.9
ENST00000351424.8
ENST00000352482.8
ENST00000358548.4
ENST00000611972.4
ENST00000615907.4
CDS-3UTR GCA 90 bp CTCTGCTCATCCGCCCTGGCTGGCTGCTCCGCTGAACAGAGCTGCGGCTGTGATATGCTGAGGCTGGGTTaGGTGTGCTCTGCAGCGGGT +
Preference number: 4 (lower is better)
Translates to: LCSSALAGCSAEQSCGCDMLRLG*VCSAAG
Trigger: ACCCGCTGCAGAGCACACGCAACCCAGCCTCAGCAT...ATCACAGCCGCAGCTCTGTTCAGCGGAGCAGCCAGCCAGGGCGGATGAGCAGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000217121.9
ENST00000346249.9
ENST00000348257.9
ENST00000351424.8
ENST00000352482.8
ENST00000358548.4
ENST00000369927.8
ENST00000611972.4
CDS-3UTR GCA 90 bp CCAGAGGCTCAAGAGCCCTTTAGGGCAGGGCATAGGAGCCAGCGGGAGCTGCCAGCACAGAGCTCCCCCTaGAGACCACGCCATCTGACA +
Preference number: 4 (lower is better)
Translates to: PEAQEPFRAGHRSQRELPAQSSP*RPRHLT
Trigger: TGTCAGATGGCGTGGTCTGCAGGGGGAGCTCTGTGC...TGGCAGCTCCCGCTGGCTCCTATGCCCTGCCCTAAAGGGCTCTTGAGCCTCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000217121.9
ENST00000346249.9
ENST00000348257.9
ENST00000351424.8
ENST00000352482.8
ENST00000358548.4
ENST00000611972.4
ENST00000615907.4
CDS-3UTR GCA 90 bp AGGCTCAAGAGCCCTTTAGGGCAGGGCATAGGAGCCAGCGGGAGCTGCCACGGTGCACAGAGCTCCCCCTaGAGACCACGCCATCTGACA +
Preference number: 4 (lower is better)
Translates to: RLKSPLGQGIGASGSCHGAQSSP*RPRHLT
Trigger: TGTCAGATGGCGTGGTCTGCAGGGGGAGCTCTGTGC...ACCGTGGCAGCTCCCGCTGGCTCCTATGCCCTGCCCTAAAGGGCTCTTGAGCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000217121.9
ENST00000346249.9
ENST00000348257.9
ENST00000351424.8
ENST00000352482.8
ENST00000358548.4
ENST00000611972.4
ENST00000615907.4
CDS-3UTR GCA 90 bp CCAGAGGCTCAAGAGCCCTTTAGGGCAGGGCATAGGAGCCAGCGGGAGCTGCCAGGCTTCCCTGGCCCCTaGATCTCTGTCGTGTGTGGA +
Preference number: 4 (lower is better)
Translates to: PEAQEPFRAGHRSQRELPGFPGP*ISVVCG
Trigger: TCCACACACGACAGAGATGCAGGGGCCAGGGAAGCC...TGGCAGCTCCCGCTGGCTCCTATGCCCTGCCCTAAAGGGCTCTTGAGCCTCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000217121.9
ENST00000346249.9
ENST00000348257.9
ENST00000351424.8
ENST00000352482.8
ENST00000358548.4
ENST00000611972.4
ENST00000615907.4
CDS-3UTR GCA 90 bp AGGCTCAAGAGCCCTTTAGGGCAGGGCATAGGAGCCAGCGGGAGCTGCCACGGTGGCTTCCCTGGCCCCTaGATCTCTGTCGTGTGTGGA +
Preference number: 4 (lower is better)
Translates to: RLKSPLGQGIGASGSCHGGFPGP*ISVVCG
Trigger: TCCACACACGACAGAGATGCAGGGGCCAGGGAAGCC...ACCGTGGCAGCTCCCGCTGGCTCCTATGCCCTGCCCTAAAGGGCTCTTGAGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000217121.9
ENST00000346249.9
ENST00000348257.9
ENST00000351424.8
ENST00000352482.8
ENST00000358548.4
ENST00000611972.4
ENST00000615907.4
CDS-3UTR GCA 90 bp CTCTGCTCATCCGCCCTGGCTGGCTGCTCCGCTGAACAGAGCTGCGGCTGTGATACTAGCCAGCGGAACTaGCTCAGCTCCGCGGCGTTT +
Preference number: 4 (lower is better)
Translates to: LCSSALAGCSAEQSCGCDTSQRN*LSSAAF
Trigger: AAACGCCGCGGAGCTGAGGCAGTTCCGCTGGCTAGT...ATCACAGCCGCAGCTCTGTTCAGCGGAGCAGCCAGCCAGGGCGGATGAGCAGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369927.8
ENST00000611972.4
CDS-3UTR CCA 90 bp CCATTCCCAGAGGCTCAAGAGCCCTTTAGGGCAGGGCATAGGAGCCAGCGGGAGCACAGTGCCTCTCCTTaGCTGCCAGGACCTGGCGCA +
Preference number: 4 (lower is better)
Translates to: PFPEAQEPFRAGHRSQREHSASP*LPGPGA
Trigger: TGCGCCAGGTCCTGGCAGCCAAGGAGAGGCACTGTG...CTCCCGCTGGCTCCTATGCCCTGCCCTAAAGGGCTCTTGAGCCTCTGGGAATGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000217121.9
ENST00000346249.9
ENST00000348257.9
ENST00000351424.8
ENST00000352482.8
ENST00000358548.4
ENST00000611972.4
ENST00000615907.4
CDS-3UTR CCA 90 bp CCCCTCCCATTCCCAGAGGCTCAAGAGCCCTTTAGGGCAGGGCATAGGAGCCAGCACAGTGCCTCTCCTTaGCTGCCAGGACCTGGCGCA +
Preference number: 4 (lower is better)
Translates to: PLPFPEAQEPFRAGHRSQHSASP*LPGPGA
Trigger: TGCGCCAGGTCCTGGCAGCCAAGGAGAGGCACTGTG...CTGGCTCCTATGCCCTGCCCTAAAGGGCTCTTGAGCCTCTGGGAATGGGAGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000217121.9
ENST00000346249.9
ENST00000348257.9
ENST00000351424.8
ENST00000352482.8
ENST00000358548.4
ENST00000611972.4
ENST00000615907.4
CDS-3UTR CCA 90 bp CCCTCCCATTCCCAGAGGCTCAAGAGCCCTTTAGGGCAGGGCATAGGAGCCAGCCACAGTGCCTCTCCTTaGCTGCCAGGACCTGGCGCA +
Preference number: 4 (lower is better)
Translates to: PSHSQRLKSPLGQGIGASHSASP*LPGPGA
Trigger: TGCGCCAGGTCCTGGCAGCCAAGGAGAGGCACTGTG...GCTGGCTCCTATGCCCTGCCCTAAAGGGCTCTTGAGCCTCTGGGAATGGGAGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000217121.9
ENST00000346249.9
ENST00000348257.9
ENST00000351424.8
ENST00000352482.8
ENST00000358548.4
ENST00000611972.4
ENST00000615907.4
CDS-3UTR CCA 90 bp CTCTGCTCATCCGCCCTGGCTGGCTGCTCCGCTGAACAGAGCTGCGGCTGTGATACATCTCCGCGTGGATaGGCAGGACTGTCCTCAGGG +
Preference number: 4 (lower is better)
Translates to: LCSSALAGCSAEQSCGCDTSPRG*AGLSSG
Trigger: CCCTGAGGACAGTCCTGCCCATCCACGCGGAGATGT...ATCACAGCCGCAGCTCTGTTCAGCGGAGCAGCCAGCCAGGGCGGATGAGCAGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000217121.9
ENST00000346249.9
ENST00000348257.9
ENST00000351424.8
ENST00000352482.8
ENST00000358548.4
ENST00000369927.8
ENST00000611972.4
CDS-3UTR CCA 90 bp AGGCTCAAGAGCCCTTTAGGGCAGGGCATAGGAGCCAGCGGGAGCTGCCACGGTACATCTCCGCGTGGATaGGCAGGACTGTCCTCAGGG +
Preference number: 4 (lower is better)
Translates to: RLKSPLGQGIGASGSCHGTSPRG*AGLSSG
Trigger: CCCTGAGGACAGTCCTGCCCATCCACGCGGAGATGT...ACCGTGGCAGCTCCCGCTGGCTCCTATGCCCTGCCCTAAAGGGCTCTTGAGCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000217121.9
ENST00000346249.9
ENST00000348257.9
ENST00000351424.8
ENST00000352482.8
ENST00000358548.4
ENST00000611972.4
ENST00000615907.4
CDS-3UTR CCA 90 bp CGGCTCTGCTCATCCGCCCTGGCTGGCTGCTCCGCTGAACAGAGCTGCGGCTGTCATCTCTGTCGTGTGTaGAGTGCCATCCCCAAGGGT +
Preference number: 4 (lower is better)
Translates to: RLCSSALAGCSAEQSCGCHLCRV*SAIPKG
Trigger: ACCCTTGGGGATGGCACTCCACACACGACAGAGATG...ACAGCCGCAGCTCTGTTCAGCGGAGCAGCCAGCCAGGGCGGATGAGCAGAGCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000217121.9
ENST00000346249.9
ENST00000348257.9
ENST00000351424.8
ENST00000352482.8
ENST00000358548.4
ENST00000611972.4
CDS-3UTR TCA 90 bp AGGCTCAAGAGCCCTTTAGGGCAGGGCATAGGAGCCAGCGGGAGCTGCCACGGTTGTGGACAGGGCAGCTaGAGTCTTCTGTCCTGCCTG +
Preference number: 4 (lower is better)
Translates to: RLKSPLGQGIGASGSCHGCGQGS*SLLSCL
Trigger: CAGGCAGGACAGAAGACTTCAGCTGCCCTGTCCACA...ACCGTGGCAGCTCCCGCTGGCTCCTATGCCCTGCCCTAAAGGGCTCTTGAGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000217121.9
ENST00000346249.9
ENST00000348257.9
ENST00000351424.8
ENST00000352482.8
ENST00000358548.4
ENST00000615907.4
CDS-3UTR TCA 90 bp CCAGAGGCTCAAGAGCCCTTTAGGGCAGGGCATAGGAGCCAGCGGGAGCTGCCATGTGGACAGGGCAGCTaGAGTCTTCTGTCCTGCCTG +
Preference number: 4 (lower is better)
Translates to: PEAQEPFRAGHRSQRELPCGQGS*SLLSCL
Trigger: CAGGCAGGACAGAAGACTTCAGCTGCCCTGTCCACA...TGGCAGCTCCCGCTGGCTCCTATGCCCTGCCCTAAAGGGCTCTTGAGCCTCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000217121.9
ENST00000346249.9
ENST00000348257.9
ENST00000351424.8
ENST00000352482.8
ENST00000358548.4
ENST00000615907.4
CDS-3UTR TCA 90 bp CGGCTCTGCTCATCCGCCCTGGCTGGCTGCTCCGCTGAACAGAGCTGCGGCTGTGGCTGGCATACTTATTaGGTGGCGGATGGAGTAGCT +
Preference number: 4 (lower is better)
Translates to: RLCSSALAGCSAEQSCGCGWHTY*VADGVA
Trigger: AGCTACTCCATCCGCCACTCAATAAGTATGCCAGCC...ACAGCCGCAGCTCTGTTCAGCGGAGCAGCCAGCCAGGGCGGATGAGCAGAGCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217121.9
ENST00000351424.8
ENST00000352482.8
ENST00000358548.4
CDS-3UTR TCA 90 bp CCATTCCCAGAGGCTCAAGAGCCCTTTAGGGCAGGGCATAGGAGCCAGCGGGAGGTCACCACTCCCCGCTaGGGAAGGGAGGTTGTCACT +
Preference number: 4 (lower is better)
Translates to: PFPEAQEPFRAGHRSQREVTTPR*GREVVT
Trigger: AGTGACAACCTCCCTTCCTCAGCGGGGAGTGGTGAC...CTCCCGCTGGCTCCTATGCCCTGCCCTAAAGGGCTCTTGAGCCTCTGGGAATGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000217121.9
ENST00000346249.9
ENST00000348257.9
ENST00000351424.8
ENST00000352482.8
ENST00000358548.4
ENST00000611972.4
ENST00000615907.4
CDS-3UTR TCA 90 bp CCCCTCCCATTCCCAGAGGCTCAAGAGCCCTTTAGGGCAGGGCATAGGAGCCAGGTCACCACTCCCCGCTaGGGAAGGGAGGTTGTCACT +
Preference number: 4 (lower is better)
Translates to: PLPFPEAQEPFRAGHRSQVTTPR*GREVVT
Trigger: AGTGACAACCTCCCTTCCTCAGCGGGGAGTGGTGAC...CTGGCTCCTATGCCCTGCCCTAAAGGGCTCTTGAGCCTCTGGGAATGGGAGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000217121.9
ENST00000346249.9
ENST00000348257.9
ENST00000351424.8
ENST00000352482.8
ENST00000358548.4
ENST00000611972.4
ENST00000615907.4
CDS-3UTR TCA 90 bp CGGCTCTGCTCATCCGCCCTGGCTGGCTGCTCCGCTGAACAGAGCTGCGGCTGTCAATCAGGCAGCTGCTaGGGGTCAGTTTCCTTTCTG +
Preference number: 4 (lower is better)
Translates to: RLCSSALAGCSAEQSCGCQSGSC*GSVSFL
Trigger: CAGAAAGGAAACTGACCCTCAGCAGCTGCCTGATTG...ACAGCCGCAGCTCTGTTCAGCGGAGCAGCCAGCCAGGGCGGATGAGCAGAGCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000217121.9
ENST00000346249.9
ENST00000348257.9
ENST00000351424.8
ENST00000352482.8
ENST00000358548.4
ENST00000611972.4
CDS-3UTR GCA 90 bp CCAGAGGCTCAAGAGCCCTTTAGGGCAGGGCATAGGAGCCAGCGGGAGCTGCCAGAGACCTGCACGTCATaGCAGCTCCTGGACAGGTTC +
Preference number: 4 (lower is better)
Translates to: PEAQEPFRAGHRSQRELPETCTS*QLLDRF
Trigger: GAACCTGTCCAGGAGCTGGCATGACGTGCAGGTCTC...TGGCAGCTCCCGCTGGCTCCTATGCCCTGCCCTAAAGGGCTCTTGAGCCTCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000217121.9
ENST00000346249.9
ENST00000348257.9
ENST00000351424.8
ENST00000352482.8
ENST00000358548.4
ENST00000611972.4
ENST00000615907.4
CDS-3UTR GCA 90 bp CTCTGCTCATCCGCCCTGGCTGGCTGCTCCGCTGAACAGAGCTGCGGCTGTGATGAGACCTGCACGTCATaGCAGCTCCTGGACAGGTTC +
Preference number: 4 (lower is better)
Translates to: LCSSALAGCSAEQSCGCDETCTS*QLLDRF
Trigger: GAACCTGTCCAGGAGCTGGCATGACGTGCAGGTCTC...ATCACAGCCGCAGCTCTGTTCAGCGGAGCAGCCAGCCAGGGCGGATGAGCAGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000217121.9
ENST00000346249.9
ENST00000348257.9
ENST00000351424.8
ENST00000352482.8
ENST00000358548.4
ENST00000369927.8
ENST00000611972.4
CDS-3UTR GCA 90 bp AGGCTCAAGAGCCCTTTAGGGCAGGGCATAGGAGCCAGCGGGAGCTGCCACGGTGAGACCTGCACGTCATaGCAGCTCCTGGACAGGTTC +
Preference number: 4 (lower is better)
Translates to: RLKSPLGQGIGASGSCHGETCTS*QLLDRF
Trigger: GAACCTGTCCAGGAGCTGGCATGACGTGCAGGTCTC...ACCGTGGCAGCTCCCGCTGGCTCCTATGCCCTGCCCTAAAGGGCTCTTGAGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000217121.9
ENST00000346249.9
ENST00000348257.9
ENST00000351424.8
ENST00000352482.8
ENST00000358548.4
ENST00000611972.4
ENST00000615907.4
CDS-3UTR GCA 90 bp CGGCTCTGCTCATCCGCCCTGGCTGGCTGCTCCGCTGAACAGAGCTGCGGCTGTAAGGGAGGTTGTCACTaGCGTTCTCTCTGTCACCCA +
Preference number: 4 (lower is better)
Translates to: RLCSSALAGCSAEQSCGCKGGCH*RSLCHP
Trigger: TGGGTGACAGAGAGAACGGCAGTGACAACCTCCCTT...ACAGCCGCAGCTCTGTTCAGCGGAGCAGCCAGCCAGGGCGGATGAGCAGAGCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000217121.9
ENST00000346249.9
ENST00000348257.9
ENST00000351424.8
ENST00000352482.8
ENST00000358548.4
ENST00000369927.8
ENST00000611972.4
CDS-3UTR GCA 90 bp CCCTCCCATTCCCAGAGGCTCAAGAGCCCTTTAGGGCAGGGCATAGGAGCCAGCGCACAGAGCTCCCCCTaGAGACCACGCCATCTGACA +
Preference number: 4 (lower is better)
Translates to: PSHSQRLKSPLGQGIGASAQSSP*RPRHLT
Trigger: TGTCAGATGGCGTGGTCTGCAGGGGGAGCTCTGTGC...GCTGGCTCCTATGCCCTGCCCTAAAGGGCTCTTGAGCCTCTGGGAATGGGAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000217121.9
ENST00000346249.9
ENST00000348257.9
ENST00000351424.8
ENST00000352482.8
ENST00000358548.4
ENST00000611972.4
ENST00000615907.4
CDS-3UTR GCA 90 bp CCCCTCCCATTCCCAGAGGCTCAAGAGCCCTTTAGGGCAGGGCATAGGAGCCAGGCACAGAGCTCCCCCTaGAGACCACGCCATCTGACA +
Preference number: 4 (lower is better)
Translates to: PLPFPEAQEPFRAGHRSQAQSSP*RPRHLT
Trigger: TGTCAGATGGCGTGGTCTGCAGGGGGAGCTCTGTGC...CTGGCTCCTATGCCCTGCCCTAAAGGGCTCTTGAGCCTCTGGGAATGGGAGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000217121.9
ENST00000346249.9
ENST00000348257.9
ENST00000351424.8
ENST00000352482.8
ENST00000358548.4
ENST00000611972.4
ENST00000615907.4
CDS-3UTR GCA 90 bp CCATTCCCAGAGGCTCAAGAGCCCTTTAGGGCAGGGCATAGGAGCCAGCGGGAGGCACAGAGCTCCCCCTaGAGACCACGCCATCTGACA +
Preference number: 4 (lower is better)
Translates to: PFPEAQEPFRAGHRSQREAQSSP*RPRHLT
Trigger: TGTCAGATGGCGTGGTCTGCAGGGGGAGCTCTGTGC...CTCCCGCTGGCTCCTATGCCCTGCCCTAAAGGGCTCTTGAGCCTCTGGGAATGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000217121.9
ENST00000346249.9
ENST00000348257.9
ENST00000351424.8
ENST00000352482.8
ENST00000358548.4
ENST00000611972.4
ENST00000615907.4
CDS-3UTR GCA 90 bp CCCTCCCATTCCCAGAGGCTCAAGAGCCCTTTAGGGCAGGGCATAGGAGCCAGCGGCTTCCCTGGCCCCTaGATCTCTGTCGTGTGTGGA +
Preference number: 4 (lower is better)
Translates to: PSHSQRLKSPLGQGIGASGFPGP*ISVVCG
Trigger: TCCACACACGACAGAGATGCAGGGGCCAGGGAAGCC...GCTGGCTCCTATGCCCTGCCCTAAAGGGCTCTTGAGCCTCTGGGAATGGGAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000217121.9
ENST00000346249.9
ENST00000348257.9
ENST00000351424.8
ENST00000352482.8
ENST00000358548.4
ENST00000611972.4
ENST00000615907.4
CDS-3UTR GCA 90 bp CCCCTCCCATTCCCAGAGGCTCAAGAGCCCTTTAGGGCAGGGCATAGGAGCCAGGGCTTCCCTGGCCCCTaGATCTCTGTCGTGTGTGGA +
Preference number: 4 (lower is better)
Translates to: PLPFPEAQEPFRAGHRSQGFPGP*ISVVCG
Trigger: TCCACACACGACAGAGATGCAGGGGCCAGGGAAGCC...CTGGCTCCTATGCCCTGCCCTAAAGGGCTCTTGAGCCTCTGGGAATGGGAGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000217121.9
ENST00000346249.9
ENST00000348257.9
ENST00000351424.8
ENST00000352482.8
ENST00000358548.4
ENST00000611972.4
ENST00000615907.4
CDS-3UTR GCA 90 bp CTCTGCTCATCCGCCCTGGCTGGCTGCTCCGCTGAACAGAGCTGCGGCTGTGATAACACCCGCACAACCTaGCTTCTCACCACACCCCAC +
Preference number: 4 (lower is better)
Translates to: LCSSALAGCSAEQSCGCDNTRTT*LLTTPH
Trigger: GTGGGGTGTGGTGAGAAGGCAGGTTGTGCGGGTGTT...ATCACAGCCGCAGCTCTGTTCAGCGGAGCAGCCAGCCAGGGCGGATGAGCAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000217121.9
ENST00000346249.9
ENST00000348257.9
ENST00000351424.8
ENST00000352482.8
ENST00000358548.4
ENST00000611972.4
CDS-3UTR GCA 90 bp CCAGAGGCTCAAGAGCCCTTTAGGGCAGGGCATAGGAGCCAGCGGGAGCTGCCAAACACCCGCACAACCTaGCTTCTCACCACACCCCAC +
Preference number: 4 (lower is better)
Translates to: PEAQEPFRAGHRSQRELPNTRTT*LLTTPH
Trigger: GTGGGGTGTGGTGAGAAGGCAGGTTGTGCGGGTGTT...TGGCAGCTCCCGCTGGCTCCTATGCCCTGCCCTAAAGGGCTCTTGAGCCTCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000217121.9
ENST00000346249.9
ENST00000348257.9
ENST00000351424.8
ENST00000352482.8
ENST00000358548.4
ENST00000611972.4
ENST00000615907.4
CDS-3UTR GCA 90 bp CCCCTCCCATTCCCAGAGGCTCAAGAGCCCTTTAGGGCAGGGCATAGGAGCCAGACTAGCCAGCGGAACTaGCTCAGCTCCGCGGCGTTT +
Preference number: 4 (lower is better)
Translates to: PLPFPEAQEPFRAGHRSQTSQRN*LSSAAF
Trigger: AAACGCCGCGGAGCTGAGGCAGTTCCGCTGGCTAGT...CTGGCTCCTATGCCCTGCCCTAAAGGGCTCTTGAGCCTCTGGGAATGGGAGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611972.4
ENST00000615907.4
CDS-3UTR GCA 90 bp CCAGAGGCTCAAGAGCCCTTTAGGGCAGGGCATAGGAGCCAGCGGGAGCTGCCATTCGCGCTAGAGACCTaGACGTCATGCCAGCTCCTG +
Preference number: 4 (lower is better)
Translates to: PEAQEPFRAGHRSQRELPFALET*TSCQLL
Trigger: CAGGAGCTGGCATGACGTGCAGGTCTCTAGCGCGAA...TGGCAGCTCCCGCTGGCTCCTATGCCCTGCCCTAAAGGGCTCTTGAGCCTCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611972.4
CDS-3UTR CCA 90 bp CGGCTCTGCTCATCCGCCCTGGCTGGCTGCTCCGCTGAACAGAGCTGCGGCTGTCGTCATGCCAGCTCCTaGACAGGTTCTGTTTCAGCT +
Preference number: 4 (lower is better)
Translates to: RLCSSALAGCSAEQSCGCRHASS*TGSVSA
Trigger: AGCTGAAACAGAACCTGTCCAGGAGCTGGCATGACG...ACAGCCGCAGCTCTGTTCAGCGGAGCAGCCAGCCAGGGCGGATGAGCAGAGCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000217121.9
ENST00000346249.9
ENST00000348257.9
ENST00000351424.8
ENST00000352482.8
ENST00000358548.4
ENST00000369927.8
ENST00000611972.4
CDS-3UTR CCA 90 bp CCCCTCCCATTCCCAGAGGCTCAAGAGCCCTTTAGGGCAGGGCATAGGAGCCAGACATCTCCGCGTGGATaGGCAGGACTGTCCTCAGGG +
Preference number: 4 (lower is better)
Translates to: PLPFPEAQEPFRAGHRSQTSPRG*AGLSSG
Trigger: CCCTGAGGACAGTCCTGCCCATCCACGCGGAGATGT...CTGGCTCCTATGCCCTGCCCTAAAGGGCTCTTGAGCCTCTGGGAATGGGAGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000217121.9
ENST00000346249.9
ENST00000348257.9
ENST00000351424.8
ENST00000352482.8
ENST00000358548.4
ENST00000611972.4
ENST00000615907.4
CDS-3UTR TCA 90 bp AGGCTCAAGAGCCCTTTAGGGCAGGGCATAGGAGCCAGCGGGAGCTGCCACGGTGGACCTGGCGCAGAGTaGCAATTTCCTCTTCCACCT +
Preference number: 4 (lower is better)
Translates to: RLKSPLGQGIGASGSCHGGPGAE*QFPLPP
Trigger: AGGTGGAAGAGGAAATTGTCACTCTGCGCCAGGTCC...ACCGTGGCAGCTCCCGCTGGCTCCTATGCCCTGCCCTAAAGGGCTCTTGAGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000217121.9
ENST00000346249.9
ENST00000348257.9
ENST00000351424.8
ENST00000352482.8
ENST00000358548.4
ENST00000611972.4
ENST00000615907.4
CDS-3UTR TCA 90 bp CTCTGCTCATCCGCCCTGGCTGGCTGCTCCGCTGAACAGAGCTGCGGCTGTGATGGACCTGGCGCAGAGTaGCAATTTCCTCTTCCACCT +
Preference number: 4 (lower is better)
Translates to: LCSSALAGCSAEQSCGCDGPGAE*QFPLPP
Trigger: AGGTGGAAGAGGAAATTGTCACTCTGCGCCAGGTCC...ATCACAGCCGCAGCTCTGTTCAGCGGAGCAGCCAGCCAGGGCGGATGAGCAGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000217121.9
ENST00000346249.9
ENST00000348257.9
ENST00000351424.8
ENST00000352482.8
ENST00000358548.4
ENST00000369927.8
ENST00000611972.4
CDS-3UTR TCA 90 bp CCCTCCCATTCCCAGAGGCTCAAGAGCCCTTTAGGGCAGGGCATAGGAGCCAGCTGTGGACAGGGCAGCTaGAGTCTTCTGTCCTGCCTG +
Preference number: 4 (lower is better)
Translates to: PSHSQRLKSPLGQGIGASCGQGS*SLLSCL
Trigger: CAGGCAGGACAGAAGACTTCAGCTGCCCTGTCCACA...GCTGGCTCCTATGCCCTGCCCTAAAGGGCTCTTGAGCCTCTGGGAATGGGAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000217121.9
ENST00000346249.9
ENST00000348257.9
ENST00000351424.8
ENST00000352482.8
ENST00000358548.4
ENST00000615907.4
CDS-3UTR TCA 90 bp CCCCTCCCATTCCCAGAGGCTCAAGAGCCCTTTAGGGCAGGGCATAGGAGCCAGTGTGGACAGGGCAGCTaGAGTCTTCTGTCCTGCCTG +
Preference number: 4 (lower is better)
Translates to: PLPFPEAQEPFRAGHRSQCGQGS*SLLSCL
Trigger: CAGGCAGGACAGAAGACTTCAGCTGCCCTGTCCACA...CTGGCTCCTATGCCCTGCCCTAAAGGGCTCTTGAGCCTCTGGGAATGGGAGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000217121.9
ENST00000346249.9
ENST00000348257.9
ENST00000351424.8
ENST00000352482.8
ENST00000358548.4
ENST00000615907.4
CDS-3UTR TCA 90 bp CCCTCCCATTCCCAGAGGCTCAAGAGCCCTTTAGGGCAGGGCATAGGAGCCAGCGGTCCTCAAACGACTTaGAGGTCGCAGAGTTCGCGC +
Preference number: 4 (lower is better)
Translates to: PSHSQRLKSPLGQGIGASGPQTT*RSQSSR
Trigger: GCGCGAACTCTGCGACCTTCAAGTCGTTTGAGGACC...GCTGGCTCCTATGCCCTGCCCTAAAGGGCTCTTGAGCCTCTGGGAATGGGAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611972.4
CDS-3UTR GCA 90 bp CCCCTCCCATTCCCAGAGGCTCAAGAGCCCTTTAGGGCAGGGCATAGGAGCCAGGAGACCTGCACGTCATaGCAGCTCCTGGACAGGTTC +
Preference number: 4 (lower is better)
Translates to: PLPFPEAQEPFRAGHRSQETCTS*QLLDRF
Trigger: GAACCTGTCCAGGAGCTGGCATGACGTGCAGGTCTC...CTGGCTCCTATGCCCTGCCCTAAAGGGCTCTTGAGCCTCTGGGAATGGGAGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000217121.9
ENST00000346249.9
ENST00000348257.9
ENST00000351424.8
ENST00000352482.8
ENST00000358548.4
ENST00000611972.4
ENST00000615907.4
CDS-3UTR GCA 90 bp CCATTCCCAGAGGCTCAAGAGCCCTTTAGGGCAGGGCATAGGAGCCAGCGGGAGGAGACCTGCACGTCATaGCAGCTCCTGGACAGGTTC +
Preference number: 4 (lower is better)
Translates to: PFPEAQEPFRAGHRSQREETCTS*QLLDRF
Trigger: GAACCTGTCCAGGAGCTGGCATGACGTGCAGGTCTC...CTCCCGCTGGCTCCTATGCCCTGCCCTAAAGGGCTCTTGAGCCTCTGGGAATGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000217121.9
ENST00000346249.9
ENST00000348257.9
ENST00000351424.8
ENST00000352482.8
ENST00000358548.4
ENST00000611972.4
ENST00000615907.4
CDS-3UTR GCA 90 bp CCCCTCCCATTCCCAGAGGCTCAAGAGCCCTTTAGGGCAGGGCATAGGAGCCAGAACACCCGCACAACCTaGCTTCTCACCACACCCCAC +
Preference number: 4 (lower is better)
Translates to: PLPFPEAQEPFRAGHRSQNTRTT*LLTTPH
Trigger: GTGGGGTGTGGTGAGAAGGCAGGTTGTGCGGGTGTT...CTGGCTCCTATGCCCTGCCCTAAAGGGCTCTTGAGCCTCTGGGAATGGGAGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000217121.9
ENST00000346249.9
ENST00000348257.9
ENST00000351424.8
ENST00000352482.8
ENST00000358548.4
ENST00000611972.4
ENST00000615907.4
CDS-3UTR GCA 90 bp CTCTGCTCATCCGCCCTGGCTGGCTGCTCCGCTGAACAGAGCTGCGGCTGTGATGGCGGATGGAGTAGCTaGTCATGTCTCCAAGCTTCC +
Preference number: 4 (lower is better)
Translates to: LCSSALAGCSAEQSCGCDGGWSS*SCLQAS
Trigger: GGAAGCTTGGAGACATGAGCAGCTACTCCATCCGCC...ATCACAGCCGCAGCTCTGTTCAGCGGAGCAGCCAGCCAGGGCGGATGAGCAGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352482.8
ENST00000358548.4
CDS-3UTR CCA 90 bp CGGCTCTGCTCATCCGCCCTGGCTGGCTGCTCCGCTGAACAGAGCTGCGGCTGTTTCAGGTTGATATCTTaGCCGGCGGAGTCCATGTTC +
Preference number: 4 (lower is better)
Translates to: RLCSSALAGCSAEQSCGCFRLIS*PAESMF
Trigger: GAACATGGACTCCGCCGGCCAAGATATCAACCTGAA...ACAGCCGCAGCTCTGTTCAGCGGAGCAGCCAGCCAGGGCGGATGAGCAGAGCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000217121.9
ENST00000346249.9
ENST00000348257.9
ENST00000351424.8
ENST00000352482.8
ENST00000358548.4
ENST00000611972.4
CDS-3UTR CCA 90 bp CGGCTCTGCTCATCCGCCCTGGCTGGCTGCTCCGCTGAACAGAGCTGCGGCTGTCAGGAACATCCGTCATaGAGTCAGACAGCAGACCTT +
Preference number: 4 (lower is better)
Translates to: RLCSSALAGCSAEQSCGCQEHPS*SQTADL
Trigger: AAGGTCTGCTGTCTGACTCCATGACGGATGTTCCTG...ACAGCCGCAGCTCTGTTCAGCGGAGCAGCCAGCCAGGGCGGATGAGCAGAGCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000217121.9
ENST00000346249.9
ENST00000348257.9
ENST00000351424.8
ENST00000352482.8
ENST00000358548.4
ENST00000611972.4
CDS-3UTR CCA 90 bp CTCTGCTCATCCGCCCTGGCTGGCTGCTCCGCTGAACAGAGCTGCGGCTGTGATTTGGCTGCCAGGACCTaGCGCAGAGTGACAATTTCC +
Preference number: 4 (lower is better)
Translates to: LCSSALAGCSAEQSCGCDLAART*RRVTIS
Trigger: GGAAATTGTCACTCTGCGCCAGGTCCTGGCAGCCAA...ATCACAGCCGCAGCTCTGTTCAGCGGAGCAGCCAGCCAGGGCGGATGAGCAGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000217121.9
ENST00000346249.9
ENST00000348257.9
ENST00000351424.8
ENST00000352482.8
ENST00000358548.4
ENST00000369927.8
ENST00000611972.4
CDS-3UTR CCA 90 bp AGGCTCAAGAGCCCTTTAGGGCAGGGCATAGGAGCCAGCGGGAGCTGCCACGGTTTGGCTGCCAGGACCTaGCGCAGAGTGACAATTTCC +
Preference number: 4 (lower is better)
Translates to: RLKSPLGQGIGASGSCHGLAART*RRVTIS
Trigger: GGAAATTGTCACTCTGCGCCAGGTCCTGGCAGCCAA...ACCGTGGCAGCTCCCGCTGGCTCCTATGCCCTGCCCTAAAGGGCTCTTGAGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000217121.9
ENST00000346249.9
ENST00000348257.9
ENST00000351424.8
ENST00000352482.8
ENST00000358548.4
ENST00000611972.4
ENST00000615907.4
CDS-3UTR CCA 90 bp CGGCTCTGCTCATCCGCCCTGGCTGGCTGCTCCGCTGAACAGAGCTGCGGCTGTATAAAACACCTCAACTaGAAGAGGCTGCCACGCAGG +
Preference number: 4 (lower is better)
Translates to: RLCSSALAGCSAEQSCGCIKHLN*KRLPRR
Trigger: CCTGCGTGGCAGCCTCTTCCAGTTGAGGTGTTTTAT...ACAGCCGCAGCTCTGTTCAGCGGAGCAGCCAGCCAGGGCGGATGAGCAGAGCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000217121.9
ENST00000346249.9
ENST00000348257.9
ENST00000351424.8
ENST00000352482.8
ENST00000358548.4
ENST00000611972.4
CDS-3UTR CCA 90 bp AGGCTCAAGAGCCCTTTAGGGCAGGGCATAGGAGCCAGCGGGAGCTGCCACGGTCATCTCTGTCGTGTGTaGAGTGCCATCCCCAAGGGT +
Preference number: 4 (lower is better)
Translates to: RLKSPLGQGIGASGSCHGHLCRV*SAIPKG
Trigger: ACCCTTGGGGATGGCACTCCACACACGACAGAGATG...ACCGTGGCAGCTCCCGCTGGCTCCTATGCCCTGCCCTAAAGGGCTCTTGAGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000217121.9
ENST00000346249.9
ENST00000348257.9
ENST00000351424.8
ENST00000352482.8
ENST00000358548.4
ENST00000611972.4
ENST00000615907.4
CDS-3UTR TCA 90 bp CCCCTCCCATTCCCAGAGGCTCAAGAGCCCTTTAGGGCAGGGCATAGGAGCCAGGGACCTGGCGCAGAGTaGCAATTTCCTCTTCCACCT +
Preference number: 4 (lower is better)
Translates to: PLPFPEAQEPFRAGHRSQGPGAE*QFPLPP
Trigger: AGGTGGAAGAGGAAATTGTCACTCTGCGCCAGGTCC...CTGGCTCCTATGCCCTGCCCTAAAGGGCTCTTGAGCCTCTGGGAATGGGAGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000217121.9
ENST00000346249.9
ENST00000348257.9
ENST00000351424.8
ENST00000352482.8
ENST00000358548.4
ENST00000611972.4
ENST00000615907.4
CDS-3UTR TCA 90 bp CCCTCCCATTCCCAGAGGCTCAAGAGCCCTTTAGGGCAGGGCATAGGAGCCAGCGGACCTGGCGCAGAGTaGCAATTTCCTCTTCCACCT +
Preference number: 4 (lower is better)
Translates to: PSHSQRLKSPLGQGIGASGPGAE*QFPLPP
Trigger: AGGTGGAAGAGGAAATTGTCACTCTGCGCCAGGTCC...GCTGGCTCCTATGCCCTGCCCTAAAGGGCTCTTGAGCCTCTGGGAATGGGAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000217121.9
ENST00000346249.9
ENST00000348257.9
ENST00000351424.8
ENST00000352482.8
ENST00000358548.4
ENST00000611972.4
ENST00000615907.4
CDS-3UTR TCA 90 bp CTCTGCTCATCCGCCCTGGCTGGCTGCTCCGCTGAACAGAGCTGCGGCTGTGATCAATCAGGCAGCTGCTaGGGGTCAGTTTCCTTTCTG +
Preference number: 4 (lower is better)
Translates to: LCSSALAGCSAEQSCGCDQSGSC*GSVSFL
Trigger: CAGAAAGGAAACTGACCCTCAGCAGCTGCCTGATTG...ATCACAGCCGCAGCTCTGTTCAGCGGAGCAGCCAGCCAGGGCGGATGAGCAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000217121.9
ENST00000346249.9
ENST00000348257.9
ENST00000351424.8
ENST00000352482.8
ENST00000358548.4
ENST00000611972.4
CDS-3UTR GCA 90 bp AGGCTCAAGAGCCCTTTAGGGCAGGGCATAGGAGCCAGCGGGAGCTGCCACGGTAAGGGAGGTTGTCACTaGCGTTCTCTCTGTCACCCA +
Preference number: 4 (lower is better)
Translates to: RLKSPLGQGIGASGSCHGKGGCH*RSLCHP
Trigger: TGGGTGACAGAGAGAACGGCAGTGACAACCTCCCTT...ACCGTGGCAGCTCCCGCTGGCTCCTATGCCCTGCCCTAAAGGGCTCTTGAGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000217121.9
ENST00000346249.9
ENST00000348257.9
ENST00000351424.8
ENST00000352482.8
ENST00000358548.4
ENST00000611972.4
ENST00000615907.4
CDS-3UTR GCA 90 bp CTCTGCTCATCCGCCCTGGCTGGCTGCTCCGCTGAACAGAGCTGCGGCTGTGATAAGGGAGGTTGTCACTaGCGTTCTCTCTGTCACCCA +
Preference number: 4 (lower is better)
Translates to: LCSSALAGCSAEQSCGCDKGGCH*RSLCHP
Trigger: TGGGTGACAGAGAGAACGGCAGTGACAACCTCCCTT...ATCACAGCCGCAGCTCTGTTCAGCGGAGCAGCCAGCCAGGGCGGATGAGCAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000217121.9
ENST00000346249.9
ENST00000348257.9
ENST00000351424.8
ENST00000352482.8
ENST00000358548.4
ENST00000369927.8
ENST00000611972.4
CDS-3UTR GCA 90 bp CCATTCCCAGAGGCTCAAGAGCCCTTTAGGGCAGGGCATAGGAGCCAGCGGGAGGGCGGATGGAGTAGCTaGTCATGTCTCCAAGCTTCC +
Preference number: 4 (lower is better)
Translates to: PFPEAQEPFRAGHRSQREGGWSS*SCLQAS
Trigger: GGAAGCTTGGAGACATGAGCAGCTACTCCATCCGCC...CTCCCGCTGGCTCCTATGCCCTGCCCTAAAGGGCTCTTGAGCCTCTGGGAATGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352482.8
ENST00000358548.4
CDS-3UTR CCA 90 bp CCCCTCCCATTCCCAGAGGCTCAAGAGCCCTTTAGGGCAGGGCATAGGAGCCAGTTGGCTGCCAGGACCTaGCGCAGAGTGACAATTTCC +
Preference number: 4 (lower is better)
Translates to: PLPFPEAQEPFRAGHRSQLAART*RRVTIS
Trigger: GGAAATTGTCACTCTGCGCCAGGTCCTGGCAGCCAA...CTGGCTCCTATGCCCTGCCCTAAAGGGCTCTTGAGCCTCTGGGAATGGGAGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000217121.9
ENST00000346249.9
ENST00000348257.9
ENST00000351424.8
ENST00000352482.8
ENST00000358548.4
ENST00000611972.4
ENST00000615907.4
CDS-3UTR CCA 90 bp CCATTCCCAGAGGCTCAAGAGCCCTTTAGGGCAGGGCATAGGAGCCAGCGGGAGTTGGCTGCCAGGACCTaGCGCAGAGTGACAATTTCC +
Preference number: 4 (lower is better)
Translates to: PFPEAQEPFRAGHRSQRELAART*RRVTIS
Trigger: GGAAATTGTCACTCTGCGCCAGGTCCTGGCAGCCAA...CTCCCGCTGGCTCCTATGCCCTGCCCTAAAGGGCTCTTGAGCCTCTGGGAATGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000217121.9
ENST00000346249.9
ENST00000348257.9
ENST00000351424.8
ENST00000352482.8
ENST00000358548.4
ENST00000611972.4
ENST00000615907.4
CDS-3UTR CCA 90 bp CCCTCCCATTCCCAGAGGCTCAAGAGCCCTTTAGGGCAGGGCATAGGAGCCAGCTTGGCTGCCAGGACCTaGCGCAGAGTGACAATTTCC +
Preference number: 4 (lower is better)
Translates to: PSHSQRLKSPLGQGIGASLAART*RRVTIS
Trigger: GGAAATTGTCACTCTGCGCCAGGTCCTGGCAGCCAA...GCTGGCTCCTATGCCCTGCCCTAAAGGGCTCTTGAGCCTCTGGGAATGGGAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000217121.9
ENST00000346249.9
ENST00000348257.9
ENST00000351424.8
ENST00000352482.8
ENST00000358548.4
ENST00000611972.4
ENST00000615907.4
CDS-3UTR CCA 90 bp CTCTGCTCATCCGCCCTGGCTGGCTGCTCCGCTGAACAGAGCTGCGGCTGTGATCGTCATGCCAGCTCCTaGACAGGTTCTGTTTCAGCT +
Preference number: 4 (lower is better)
Translates to: LCSSALAGCSAEQSCGCDRHASS*TGSVSA
Trigger: AGCTGAAACAGAACCTGTCCAGGAGCTGGCATGACG...ATCACAGCCGCAGCTCTGTTCAGCGGAGCAGCCAGCCAGGGCGGATGAGCAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000217121.9
ENST00000346249.9
ENST00000348257.9
ENST00000351424.8
ENST00000352482.8
ENST00000358548.4
ENST00000369927.8
ENST00000611972.4
CDS-3UTR CCA 90 bp CCAGAGGCTCAAGAGCCCTTTAGGGCAGGGCATAGGAGCCAGCGGGAGCTGCCACGTCATGCCAGCTCCTaGACAGGTTCTGTTTCAGCT +
Preference number: 4 (lower is better)
Translates to: PEAQEPFRAGHRSQRELPRHASS*TGSVSA
Trigger: AGCTGAAACAGAACCTGTCCAGGAGCTGGCATGACG...TGGCAGCTCCCGCTGGCTCCTATGCCCTGCCCTAAAGGGCTCTTGAGCCTCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000217121.9
ENST00000346249.9
ENST00000348257.9
ENST00000351424.8
ENST00000352482.8
ENST00000358548.4
ENST00000611972.4
ENST00000615907.4
CDS-3UTR CCA 90 bp CGGCTCTGCTCATCCGCCCTGGCTGGCTGCTCCGCTGAACAGAGCTGCGGCTGTGGTCAGTTTCCTTTCTaGGGGTCTCAGAAAATGGAC +
Preference number: 4 (lower is better)
Translates to: RLCSSALAGCSAEQSCGCGQFPF*GSQKMD
Trigger: GTCCATTTTCTGAGACCCCCAGAAAGGAAACTGACC...ACAGCCGCAGCTCTGTTCAGCGGAGCAGCCAGCCAGGGCGGATGAGCAGAGCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000217121.9
ENST00000346249.9
ENST00000348257.9
ENST00000351424.8
ENST00000352482.8
ENST00000358548.4
ENST00000611972.4
CDS-3UTR CCA 90 bp CCATTCCCAGAGGCTCAAGAGCCCTTTAGGGCAGGGCATAGGAGCCAGCGGGAGCATCTCTGTCGTGTGTaGAGTGCCATCCCCAAGGGT +
Preference number: 4 (lower is better)
Translates to: PFPEAQEPFRAGHRSQREHLCRV*SAIPKG
Trigger: ACCCTTGGGGATGGCACTCCACACACGACAGAGATG...CTCCCGCTGGCTCCTATGCCCTGCCCTAAAGGGCTCTTGAGCCTCTGGGAATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000217121.9
ENST00000346249.9
ENST00000348257.9
ENST00000351424.8
ENST00000352482.8
ENST00000358548.4
ENST00000611972.4
ENST00000615907.4
CDS-3UTR CCA 90 bp CCCTCCCATTCCCAGAGGCTCAAGAGCCCTTTAGGGCAGGGCATAGGAGCCAGCCATCTCTGTCGTGTGTaGAGTGCCATCCCCAAGGGT +
Preference number: 4 (lower is better)
Translates to: PSHSQRLKSPLGQGIGASHLCRV*SAIPKG
Trigger: ACCCTTGGGGATGGCACTCCACACACGACAGAGATG...GCTGGCTCCTATGCCCTGCCCTAAAGGGCTCTTGAGCCTCTGGGAATGGGAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000217121.9
ENST00000346249.9
ENST00000348257.9
ENST00000351424.8
ENST00000352482.8
ENST00000358548.4
ENST00000611972.4
ENST00000615907.4
CDS-3UTR CCA 90 bp CCCCTCCCATTCCCAGAGGCTCAAGAGCCCTTTAGGGCAGGGCATAGGAGCCAGCATCTCTGTCGTGTGTaGAGTGCCATCCCCAAGGGT +
Preference number: 4 (lower is better)
Translates to: PLPFPEAQEPFRAGHRSQHLCRV*SAIPKG
Trigger: ACCCTTGGGGATGGCACTCCACACACGACAGAGATG...CTGGCTCCTATGCCCTGCCCTAAAGGGCTCTTGAGCCTCTGGGAATGGGAGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000217121.9
ENST00000346249.9
ENST00000348257.9
ENST00000351424.8
ENST00000352482.8
ENST00000358548.4
ENST00000611972.4
ENST00000615907.4
CDS-3UTR TCA 90 bp CGGCTCTGCTCATCCGCCCTGGCTGGCTGCTCCGCTGAACAGAGCTGCGGCTGTCTTCTTGTAGAGGTCTaGCTGGGTCACTTTCTCATT +
Preference number: 4 (lower is better)
Translates to: RLCSSALAGCSAEQSCGCLLVEV*LGHFLI
Trigger: AATGAGAAAGTGACCCAGTCAGACCTCTACAAGAAG...ACAGCCGCAGCTCTGTTCAGCGGAGCAGCCAGCCAGGGCGGATGAGCAGAGCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217121.9
ENST00000346249.9
ENST00000352482.8
CDS-3UTR TCA 90 bp CCCCTCCCATTCCCAGAGGCTCAAGAGCCCTTTAGGGCAGGGCATAGGAGCCAGGGCTGGCATACTTATTaGGTGGCGGATGGAGTAGCT +
Preference number: 4 (lower is better)
Translates to: PLPFPEAQEPFRAGHRSQGWHTY*VADGVA
Trigger: AGCTACTCCATCCGCCACTCAATAAGTATGCCAGCC...CTGGCTCCTATGCCCTGCCCTAAAGGGCTCTTGAGCCTCTGGGAATGGGAGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217121.9
ENST00000351424.8
ENST00000352482.8
ENST00000358548.4
CDS-3UTR TCA 90 bp CCATTCCCAGAGGCTCAAGAGCCCTTTAGGGCAGGGCATAGGAGCCAGCGGGAGGGCTGGCATACTTATTaGGTGGCGGATGGAGTAGCT +
Preference number: 4 (lower is better)
Translates to: PFPEAQEPFRAGHRSQREGWHTY*VADGVA
Trigger: AGCTACTCCATCCGCCACTCAATAAGTATGCCAGCC...CTCCCGCTGGCTCCTATGCCCTGCCCTAAAGGGCTCTTGAGCCTCTGGGAATGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217121.9
ENST00000351424.8
ENST00000352482.8
ENST00000358548.4
CDS-3UTR TCA 90 bp CTCTGCTCATCCGCCCTGGCTGGCTGCTCCGCTGAACAGAGCTGCGGCTGTGATGGGATGGAGTGTGCGTaGCATAAAACACCTCAACTG +
Preference number: 4 (lower is better)
Translates to: LCSSALAGCSAEQSCGCDGMECA*HKTPQL
Trigger: CAGTTGAGGTGTTTTATGTCACGCACACTCCATCCC...ATCACAGCCGCAGCTCTGTTCAGCGGAGCAGCCAGCCAGGGCGGATGAGCAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000217121.9
ENST00000346249.9
ENST00000348257.9
ENST00000351424.8
ENST00000352482.8
ENST00000358548.4
ENST00000611972.4
CDS-3UTR TCA 90 bp AGGCTCAAGAGCCCTTTAGGGCAGGGCATAGGAGCCAGCGGGAGCTGCCACGGTGGGATGGAGTGTGCGTaGCATAAAACACCTCAACTG +
Preference number: 4 (lower is better)
Translates to: RLKSPLGQGIGASGSCHGGMECA*HKTPQL
Trigger: CAGTTGAGGTGTTTTATGTCACGCACACTCCATCCC...ACCGTGGCAGCTCCCGCTGGCTCCTATGCCCTGCCCTAAAGGGCTCTTGAGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000217121.9
ENST00000346249.9
ENST00000348257.9
ENST00000351424.8
ENST00000352482.8
ENST00000358548.4
ENST00000611972.4
ENST00000615907.4
CDS-3UTR GCA 90 bp CCCTCCCATTCCCAGAGGCTCAAGAGCCCTTTAGGGCAGGGCATAGGAGCCAGCAAGGGAGGTTGTCACTaGCGTTCTCTCTGTCACCCA +
Preference number: 4 (lower is better)
Translates to: PSHSQRLKSPLGQGIGASKGGCH*RSLCHP
Trigger: TGGGTGACAGAGAGAACGGCAGTGACAACCTCCCTT...GCTGGCTCCTATGCCCTGCCCTAAAGGGCTCTTGAGCCTCTGGGAATGGGAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000217121.9
ENST00000346249.9
ENST00000348257.9
ENST00000351424.8
ENST00000352482.8
ENST00000358548.4
ENST00000611972.4
ENST00000615907.4
CDS-3UTR GCA 90 bp CCATTCCCAGAGGCTCAAGAGCCCTTTAGGGCAGGGCATAGGAGCCAGCGGGAGAAGGGAGGTTGTCACTaGCGTTCTCTCTGTCACCCA +
Preference number: 4 (lower is better)
Translates to: PFPEAQEPFRAGHRSQREKGGCH*RSLCHP
Trigger: TGGGTGACAGAGAGAACGGCAGTGACAACCTCCCTT...CTCCCGCTGGCTCCTATGCCCTGCCCTAAAGGGCTCTTGAGCCTCTGGGAATGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000217121.9
ENST00000346249.9
ENST00000348257.9
ENST00000351424.8
ENST00000352482.8
ENST00000358548.4
ENST00000611972.4
ENST00000615907.4
CDS-3UTR GCA 90 bp CCCCTCCCATTCCCAGAGGCTCAAGAGCCCTTTAGGGCAGGGCATAGGAGCCAGAAGGGAGGTTGTCACTaGCGTTCTCTCTGTCACCCA +
Preference number: 4 (lower is better)
Translates to: PLPFPEAQEPFRAGHRSQKGGCH*RSLCHP
Trigger: TGGGTGACAGAGAGAACGGCAGTGACAACCTCCCTT...CTGGCTCCTATGCCCTGCCCTAAAGGGCTCTTGAGCCTCTGGGAATGGGAGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000217121.9
ENST00000346249.9
ENST00000348257.9
ENST00000351424.8
ENST00000352482.8
ENST00000358548.4
ENST00000611972.4
ENST00000615907.4
CDS-3UTR GCA 90 bp CGGCTCTGCTCATCCGCCCTGGCTGGCTGCTCCGCTGAACAGAGCTGCGGCTGTTGTTCTTCAAATTCATaGAAACGCGGCAGCCACATC +
Preference number: 4 (lower is better)
Translates to: RLCSSALAGCSAEQSCGCCSSNS*KRGSHI
Trigger: GATGTGGCTGCCGCGTTTGCATGAATTTGAAGAACA...ACAGCCGCAGCTCTGTTCAGCGGAGCAGCCAGCCAGGGCGGATGAGCAGAGCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000217121.9
ENST00000346249.9
ENST00000348257.9
ENST00000351424.8
ENST00000352482.8
ENST00000358548.4
ENST00000369927.8
ENST00000611972.4
CDS-3UTR CCA 90 bp AGGCTCAAGAGCCCTTTAGGGCAGGGCATAGGAGCCAGCGGGAGCTGCCACGGTTTCAGGTTGATATCTTaGCCGGCGGAGTCCATGTTC +
Preference number: 4 (lower is better)
Translates to: RLKSPLGQGIGASGSCHGFRLIS*PAESMF
Trigger: GAACATGGACTCCGCCGGCCAAGATATCAACCTGAA...ACCGTGGCAGCTCCCGCTGGCTCCTATGCCCTGCCCTAAAGGGCTCTTGAGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000217121.9
ENST00000346249.9
ENST00000348257.9
ENST00000351424.8
ENST00000352482.8
ENST00000358548.4
ENST00000611972.4
ENST00000615907.4
CDS-3UTR CCA 90 bp CTCTGCTCATCCGCCCTGGCTGGCTGCTCCGCTGAACAGAGCTGCGGCTGTGATCAGGAACATCCGTCATaGAGTCAGACAGCAGACCTT +
Preference number: 4 (lower is better)
Translates to: LCSSALAGCSAEQSCGCDQEHPS*SQTADL
Trigger: AAGGTCTGCTGTCTGACTCCATGACGGATGTTCCTG...ATCACAGCCGCAGCTCTGTTCAGCGGAGCAGCCAGCCAGGGCGGATGAGCAGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000217121.9
ENST00000346249.9
ENST00000348257.9
ENST00000351424.8
ENST00000352482.8
ENST00000358548.4
ENST00000611972.4
CDS-3UTR CCA 90 bp AGGCTCAAGAGCCCTTTAGGGCAGGGCATAGGAGCCAGCGGGAGCTGCCACGGTCAGGAACATCCGTCATaGAGTCAGACAGCAGACCTT +
Preference number: 4 (lower is better)
Translates to: RLKSPLGQGIGASGSCHGQEHPS*SQTADL
Trigger: AAGGTCTGCTGTCTGACTCCATGACGGATGTTCCTG...ACCGTGGCAGCTCCCGCTGGCTCCTATGCCCTGCCCTAAAGGGCTCTTGAGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000217121.9
ENST00000346249.9
ENST00000348257.9
ENST00000351424.8
ENST00000352482.8
ENST00000358548.4
ENST00000611972.4
ENST00000615907.4
CDS-3UTR CCA 90 bp CCAGAGGCTCAAGAGCCCTTTAGGGCAGGGCATAGGAGCCAGCGGGAGCTGCCACAGGAACATCCGTCATaGAGTCAGACAGCAGACCTT +
Preference number: 4 (lower is better)
Translates to: PEAQEPFRAGHRSQRELPQEHPS*SQTADL
Trigger: AAGGTCTGCTGTCTGACTCCATGACGGATGTTCCTG...TGGCAGCTCCCGCTGGCTCCTATGCCCTGCCCTAAAGGGCTCTTGAGCCTCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000217121.9
ENST00000346249.9
ENST00000348257.9
ENST00000351424.8
ENST00000352482.8
ENST00000358548.4
ENST00000611972.4
ENST00000615907.4
CDS-3UTR CCA 90 bp CCCTCCCATTCCCAGAGGCTCAAGAGCCCTTTAGGGCAGGGCATAGGAGCCAGCCGTCATGCCAGCTCCTaGACAGGTTCTGTTTCAGCT +
Preference number: 4 (lower is better)
Translates to: PSHSQRLKSPLGQGIGASRHASS*TGSVSA
Trigger: AGCTGAAACAGAACCTGTCCAGGAGCTGGCATGACG...GCTGGCTCCTATGCCCTGCCCTAAAGGGCTCTTGAGCCTCTGGGAATGGGAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000217121.9
ENST00000346249.9
ENST00000348257.9
ENST00000351424.8
ENST00000352482.8
ENST00000358548.4
ENST00000611972.4
ENST00000615907.4
CDS-3UTR CCA 90 bp CCCCTCCCATTCCCAGAGGCTCAAGAGCCCTTTAGGGCAGGGCATAGGAGCCAGCGTCATGCCAGCTCCTaGACAGGTTCTGTTTCAGCT +
Preference number: 4 (lower is better)
Translates to: PLPFPEAQEPFRAGHRSQRHASS*TGSVSA
Trigger: AGCTGAAACAGAACCTGTCCAGGAGCTGGCATGACG...CTGGCTCCTATGCCCTGCCCTAAAGGGCTCTTGAGCCTCTGGGAATGGGAGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000217121.9
ENST00000346249.9
ENST00000348257.9
ENST00000351424.8
ENST00000352482.8
ENST00000358548.4
ENST00000611972.4
ENST00000615907.4
CDS-3UTR CCA 90 bp CTCTGCTCATCCGCCCTGGCTGGCTGCTCCGCTGAACAGAGCTGCGGCTGTGATATAAAACACCTCAACTaGAAGAGGCTGCCACGCAGG +
Preference number: 4 (lower is better)
Translates to: LCSSALAGCSAEQSCGCDIKHLN*KRLPRR
Trigger: CCTGCGTGGCAGCCTCTTCCAGTTGAGGTGTTTTAT...ATCACAGCCGCAGCTCTGTTCAGCGGAGCAGCCAGCCAGGGCGGATGAGCAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000217121.9
ENST00000346249.9
ENST00000348257.9
ENST00000351424.8
ENST00000352482.8
ENST00000358548.4
ENST00000611972.4
CDS-3UTR TCA 90 bp CCCCTCCCATTCCCAGAGGCTCAAGAGCCCTTTAGGGCAGGGCATAGGAGCCAGGAGTGTGAAAATGGATaGGCCCTCATGTCTCCAAGC +
Preference number: 4 (lower is better)
Translates to: PLPFPEAQEPFRAGHRSQECENG*ALMSPS
Trigger: GCTTGGAGACATGAGGGCTCATCCATTTTCACACTC...CTGGCTCCTATGCCCTGCCCTAAAGGGCTCTTGAGCCTCTGGGAATGGGAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217121.9
ENST00000351424.8
CDS-3UTR TCA 90 bp CCATTCCCAGAGGCTCAAGAGCCCTTTAGGGCAGGGCATAGGAGCCAGCGGGAGGAGTGTGAAAATGGATaGGCCCTCATGTCTCCAAGC +
Preference number: 4 (lower is better)
Translates to: PFPEAQEPFRAGHRSQREECENG*ALMSPS
Trigger: GCTTGGAGACATGAGGGCTCATCCATTTTCACACTC...CTCCCGCTGGCTCCTATGCCCTGCCCTAAAGGGCTCTTGAGCCTCTGGGAATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217121.9
ENST00000351424.8
CDS-3UTR TCA 90 bp CCATTCCCAGAGGCTCAAGAGCCCTTTAGGGCAGGGCATAGGAGCCAGCGGGAGGGGATGGAGTGTGCGTaGCATAAAACACCTCAACTG +
Preference number: 4 (lower is better)
Translates to: PFPEAQEPFRAGHRSQREGMECA*HKTPQL
Trigger: CAGTTGAGGTGTTTTATGTCACGCACACTCCATCCC...CTCCCGCTGGCTCCTATGCCCTGCCCTAAAGGGCTCTTGAGCCTCTGGGAATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000217121.9
ENST00000346249.9
ENST00000348257.9
ENST00000351424.8
ENST00000352482.8
ENST00000358548.4
ENST00000611972.4
ENST00000615907.4
CDS-3UTR TCA 90 bp CCCCTCCCATTCCCAGAGGCTCAAGAGCCCTTTAGGGCAGGGCATAGGAGCCAGGGGATGGAGTGTGCGTaGCATAAAACACCTCAACTG +
Preference number: 4 (lower is better)
Translates to: PLPFPEAQEPFRAGHRSQGMECA*HKTPQL
Trigger: CAGTTGAGGTGTTTTATGTCACGCACACTCCATCCC...CTGGCTCCTATGCCCTGCCCTAAAGGGCTCTTGAGCCTCTGGGAATGGGAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000217121.9
ENST00000346249.9
ENST00000348257.9
ENST00000351424.8
ENST00000352482.8
ENST00000358548.4
ENST00000611972.4
ENST00000615907.4
CDS-3UTR CCA 90 bp CCCCTCCCATTCCCAGAGGCTCAAGAGCCCTTTAGGGCAGGGCATAGGAGCCAGTTCAGGTTGATATCTTaGCCGGCGGAGTCCATGTTC +
Preference number: 4 (lower is better)
Translates to: PLPFPEAQEPFRAGHRSQFRLIS*PAESMF
Trigger: GAACATGGACTCCGCCGGCCAAGATATCAACCTGAA...CTGGCTCCTATGCCCTGCCCTAAAGGGCTCTTGAGCCTCTGGGAATGGGAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000217121.9
ENST00000346249.9
ENST00000348257.9
ENST00000351424.8
ENST00000352482.8
ENST00000358548.4
ENST00000611972.4
ENST00000615907.4
CDS-3UTR CCA 90 bp CCATTCCCAGAGGCTCAAGAGCCCTTTAGGGCAGGGCATAGGAGCCAGCGGGAGTTCAGGTTGATATCTTaGCCGGCGGAGTCCATGTTC +
Preference number: 4 (lower is better)
Translates to: PFPEAQEPFRAGHRSQREFRLIS*PAESMF
Trigger: GAACATGGACTCCGCCGGCCAAGATATCAACCTGAA...CTCCCGCTGGCTCCTATGCCCTGCCCTAAAGGGCTCTTGAGCCTCTGGGAATGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000217121.9
ENST00000346249.9
ENST00000348257.9
ENST00000351424.8
ENST00000352482.8
ENST00000358548.4
ENST00000611972.4
ENST00000615907.4
CDS-3UTR CCA 90 bp CCCTCCCATTCCCAGAGGCTCAAGAGCCCTTTAGGGCAGGGCATAGGAGCCAGCTTCAGGTTGATATCTTaGCCGGCGGAGTCCATGTTC +
Preference number: 4 (lower is better)
Translates to: PSHSQRLKSPLGQGIGASFRLIS*PAESMF
Trigger: GAACATGGACTCCGCCGGCCAAGATATCAACCTGAA...GCTGGCTCCTATGCCCTGCCCTAAAGGGCTCTTGAGCCTCTGGGAATGGGAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000217121.9
ENST00000346249.9
ENST00000348257.9
ENST00000351424.8
ENST00000352482.8
ENST00000358548.4
ENST00000611972.4
ENST00000615907.4
CDS-3UTR CCA 90 bp CCCTCCCATTCCCAGAGGCTCAAGAGCCCTTTAGGGCAGGGCATAGGAGCCAGCCAGGAACATCCGTCATaGAGTCAGACAGCAGACCTT +
Preference number: 4 (lower is better)
Translates to: PSHSQRLKSPLGQGIGASQEHPS*SQTADL
Trigger: AAGGTCTGCTGTCTGACTCCATGACGGATGTTCCTG...GCTGGCTCCTATGCCCTGCCCTAAAGGGCTCTTGAGCCTCTGGGAATGGGAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000217121.9
ENST00000346249.9
ENST00000348257.9
ENST00000351424.8
ENST00000352482.8
ENST00000358548.4
ENST00000611972.4
ENST00000615907.4
CDS-3UTR CCA 90 bp CCCTCCCATTCCCAGAGGCTCAAGAGCCCTTTAGGGCAGGGCATAGGAGCCAGCATAAAACACCTCAACTaGAAGAGGCTGCCACGCAGG +
Preference number: 4 (lower is better)
Translates to: PSHSQRLKSPLGQGIGASIKHLN*KRLPRR
Trigger: CCTGCGTGGCAGCCTCTTCCAGTTGAGGTGTTTTAT...GCTGGCTCCTATGCCCTGCCCTAAAGGGCTCTTGAGCCTCTGGGAATGGGAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000217121.9
ENST00000346249.9
ENST00000348257.9
ENST00000351424.8
ENST00000352482.8
ENST00000358548.4
ENST00000611972.4
ENST00000615907.4
CDS-3UTR CCA 90 bp CCATTCCCAGAGGCTCAAGAGCCCTTTAGGGCAGGGCATAGGAGCCAGCGGGAGATAAAACACCTCAACTaGAAGAGGCTGCCACGCAGG +
Preference number: 4 (lower is better)
Translates to: PFPEAQEPFRAGHRSQREIKHLN*KRLPRR
Trigger: CCTGCGTGGCAGCCTCTTCCAGTTGAGGTGTTTTAT...CTCCCGCTGGCTCCTATGCCCTGCCCTAAAGGGCTCTTGAGCCTCTGGGAATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000217121.9
ENST00000346249.9
ENST00000348257.9
ENST00000351424.8
ENST00000352482.8
ENST00000358548.4
ENST00000611972.4
ENST00000615907.4
CDS-3UTR CCA 90 bp CCCCTCCCATTCCCAGAGGCTCAAGAGCCCTTTAGGGCAGGGCATAGGAGCCAGATAAAACACCTCAACTaGAAGAGGCTGCCACGCAGG +
Preference number: 4 (lower is better)
Translates to: PLPFPEAQEPFRAGHRSQIKHLN*KRLPRR
Trigger: CCTGCGTGGCAGCCTCTTCCAGTTGAGGTGTTTTAT...CTGGCTCCTATGCCCTGCCCTAAAGGGCTCTTGAGCCTCTGGGAATGGGAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000217121.9
ENST00000346249.9
ENST00000348257.9
ENST00000351424.8
ENST00000352482.8
ENST00000358548.4
ENST00000611972.4
ENST00000615907.4
CDS-3UTR TCA 90 bp CCATTCCCAGAGGCTCAAGAGCCCTTTAGGGCAGGGCATAGGAGCCAGCGGGAGGCTGCTAAAGGAGTGTaGAAATGGATGAGCCCTCAT +
Preference number: 4 (lower is better)
Translates to: PFPEAQEPFRAGHRSQREAAKGV*KWMSPH
Trigger: ATGAGGGCTCATCCATTTTCACACTCCTTTAGCAGC...CTCCCGCTGGCTCCTATGCCCTGCCCTAAAGGGCTCTTGAGCCTCTGGGAATGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217121.9
ENST00000351424.8
CDS-3UTR TCA 90 bp CCCTCCCATTCCCAGAGGCTCAAGAGCCCTTTAGGGCAGGGCATAGGAGCCAGCGCTGCTAAAGGAGTGTaGAAATGGATGAGCCCTCAT +
Preference number: 4 (lower is better)
Translates to: PSHSQRLKSPLGQGIGASAAKGV*KWMSPH
Trigger: ATGAGGGCTCATCCATTTTCACACTCCTTTAGCAGC...GCTGGCTCCTATGCCCTGCCCTAAAGGGCTCTTGAGCCTCTGGGAATGGGAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217121.9
ENST00000351424.8
CDS-3UTR TCA 90 bp CTCTGCTCATCCGCCCTGGCTGGCTGCTCCGCTGAACAGAGCTGCGGCTGTGATGATCTTTGTAGCTCCTaGGAAAAAGACTGTAACGGC +
Preference number: 4 (lower is better)
Translates to: LCSSALAGCSAEQSCGCDDLCSS*EKDCNG
Trigger: GCCGTTACAGTCTTTTTCTCAGGAGCTACAAAGATC...ATCACAGCCGCAGCTCTGTTCAGCGGAGCAGCCAGCCAGGGCGGATGAGCAGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000217121.9
ENST00000346249.9
ENST00000348257.9
ENST00000351424.8
ENST00000352482.8
ENST00000358548.4
ENST00000611972.4
CDS-3UTR TCA 90 bp AGGCTCAAGAGCCCTTTAGGGCAGGGCATAGGAGCCAGCGGGAGCTGCCACGGTGATCTTTGTAGCTCCTaGGAAAAAGACTGTAACGGC +
Preference number: 4 (lower is better)
Translates to: RLKSPLGQGIGASGSCHGDLCSS*EKDCNG
Trigger: GCCGTTACAGTCTTTTTCTCAGGAGCTACAAAGATC...ACCGTGGCAGCTCCCGCTGGCTCCTATGCCCTGCCCTAAAGGGCTCTTGAGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000217121.9
ENST00000346249.9
ENST00000348257.9
ENST00000351424.8
ENST00000352482.8
ENST00000358548.4
ENST00000611972.4
ENST00000615907.4
CDS-3UTR TCA 90 bp CCAGAGGCTCAAGAGCCCTTTAGGGCAGGGCATAGGAGCCAGCGGGAGCTGCCAGATCTTTGTAGCTCCTaGGAAAAAGACTGTAACGGC +
Preference number: 4 (lower is better)
Translates to: PEAQEPFRAGHRSQRELPDLCSS*EKDCNG
Trigger: GCCGTTACAGTCTTTTTCTCAGGAGCTACAAAGATC...TGGCAGCTCCCGCTGGCTCCTATGCCCTGCCCTAAAGGGCTCTTGAGCCTCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000217121.9
ENST00000346249.9
ENST00000348257.9
ENST00000351424.8
ENST00000352482.8
ENST00000358548.4
ENST00000611972.4
ENST00000615907.4
CDS-3UTR GCA 90 bp CTCTGCTCATCCGCCCTGGCTGGCTGCTCCGCTGAACAGAGCTGCGGCTGTGATTGTTCTTCAAATTCATaGAAACGCGGCAGCCACATC +
Preference number: 4 (lower is better)
Translates to: LCSSALAGCSAEQSCGCDCSSNS*KRGSHI
Trigger: GATGTGGCTGCCGCGTTTGCATGAATTTGAAGAACA...ATCACAGCCGCAGCTCTGTTCAGCGGAGCAGCCAGCCAGGGCGGATGAGCAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000217121.9
ENST00000346249.9
ENST00000348257.9
ENST00000351424.8
ENST00000352482.8
ENST00000358548.4
ENST00000369927.8
ENST00000611972.4
CDS-3UTR CCA 90 bp AGGCTCAAGAGCCCTTTAGGGCAGGGCATAGGAGCCAGCGGGAGCTGCCACGGTTCGCAGAGTTCCTCATaGCTGGCATACTTATTGAGT +
Preference number: 4 (lower is better)
Translates to: RLKSPLGQGIGASGSCHGSQSSS*LAYLLS
Trigger: ACTCAATAAGTATGCCAGCCATGAGGAACTCTGCGA...ACCGTGGCAGCTCCCGCTGGCTCCTATGCCCTGCCCTAAAGGGCTCTTGAGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217121.9
ENST00000351424.8
ENST00000352482.8
ENST00000358548.4
CDS-3UTR CCA 90 bp CCCCTCCCATTCCCAGAGGCTCAAGAGCCCTTTAGGGCAGGGCATAGGAGCCAGGGTCAGTTTCCTTTCTaGGGGTCTCAGAAAATGGAC +
Preference number: 4 (lower is better)
Translates to: PLPFPEAQEPFRAGHRSQGQFPF*GSQKMD
Trigger: GTCCATTTTCTGAGACCCCCAGAAAGGAAACTGACC...CTGGCTCCTATGCCCTGCCCTAAAGGGCTCTTGAGCCTCTGGGAATGGGAGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000217121.9
ENST00000346249.9
ENST00000348257.9
ENST00000351424.8
ENST00000352482.8
ENST00000358548.4
ENST00000611972.4
ENST00000615907.4
CDS-3UTR CCA 90 bp CCCTCCCATTCCCAGAGGCTCAAGAGCCCTTTAGGGCAGGGCATAGGAGCCAGCGGTCAGTTTCCTTTCTaGGGGTCTCAGAAAATGGAC +
Preference number: 4 (lower is better)
Translates to: PSHSQRLKSPLGQGIGASGQFPF*GSQKMD
Trigger: GTCCATTTTCTGAGACCCCCAGAAAGGAAACTGACC...GCTGGCTCCTATGCCCTGCCCTAAAGGGCTCTTGAGCCTCTGGGAATGGGAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000217121.9
ENST00000346249.9
ENST00000348257.9
ENST00000351424.8
ENST00000352482.8
ENST00000358548.4
ENST00000611972.4
ENST00000615907.4
CDS-3UTR CCA 90 bp CCCTCCCATTCCCAGAGGCTCAAGAGCCCTTTAGGGCAGGGCATAGGAGCCAGCTTATTGAGTGGCGGATaGAGTAGCTGCTCATGTCTC +
Preference number: 4 (lower is better)
Translates to: PSHSQRLKSPLGQGIGASLLSGG*SSCSCL
Trigger: GAGACATGAGCAGCTACTCCATCCGCCACTCAATAA...GCTGGCTCCTATGCCCTGCCCTAAAGGGCTCTTGAGCCTCTGGGAATGGGAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352482.8
ENST00000358548.4
CDS-3UTR CCA 90 bp CCATTCCCAGAGGCTCAAGAGCCCTTTAGGGCAGGGCATAGGAGCCAGCGGGAGTTATTGAGTGGCGGATaGAGTAGCTGCTCATGTCTC +
Preference number: 4 (lower is better)
Translates to: PFPEAQEPFRAGHRSQRELLSGG*SSCSCL
Trigger: GAGACATGAGCAGCTACTCCATCCGCCACTCAATAA...CTCCCGCTGGCTCCTATGCCCTGCCCTAAAGGGCTCTTGAGCCTCTGGGAATGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352482.8
ENST00000358548.4
CDS-3UTR TCA 90 bp CCCCTCCCATTCCCAGAGGCTCAAGAGCCCTTTAGGGCAGGGCATAGGAGCCAGCTTCTTGTAGAGGTCTaGCTGGGTCACTTTCTCATT +
Preference number: 4 (lower is better)
Translates to: PLPFPEAQEPFRAGHRSQLLVEV*LGHFLI
Trigger: AATGAGAAAGTGACCCAGTCAGACCTCTACAAGAAG...CTGGCTCCTATGCCCTGCCCTAAAGGGCTCTTGAGCCTCTGGGAATGGGAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217121.9
ENST00000346249.9
ENST00000352482.8
ENST00000615907.4
CDS-3UTR TCA 90 bp CCCTCCCATTCCCAGAGGCTCAAGAGCCCTTTAGGGCAGGGCATAGGAGCCAGCCTTCTTGTAGAGGTCTaGCTGGGTCACTTTCTCATT +
Preference number: 4 (lower is better)
Translates to: PSHSQRLKSPLGQGIGASLLVEV*LGHFLI
Trigger: AATGAGAAAGTGACCCAGTCAGACCTCTACAAGAAG...GCTGGCTCCTATGCCCTGCCCTAAAGGGCTCTTGAGCCTCTGGGAATGGGAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217121.9
ENST00000346249.9
ENST00000352482.8
ENST00000615907.4
CDS-3UTR TCA 90 bp CCATTCCCAGAGGCTCAAGAGCCCTTTAGGGCAGGGCATAGGAGCCAGCGGGAGGATCTTTGTAGCTCCTaGGAAAAAGACTGTAACGGC +
Preference number: 4 (lower is better)
Translates to: PFPEAQEPFRAGHRSQREDLCSS*EKDCNG
Trigger: GCCGTTACAGTCTTTTTCTCAGGAGCTACAAAGATC...CTCCCGCTGGCTCCTATGCCCTGCCCTAAAGGGCTCTTGAGCCTCTGGGAATGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000217121.9
ENST00000346249.9
ENST00000348257.9
ENST00000351424.8
ENST00000352482.8
ENST00000358548.4
ENST00000611972.4
ENST00000615907.4
CDS-3UTR TCA 90 bp CCCCTCCCATTCCCAGAGGCTCAAGAGCCCTTTAGGGCAGGGCATAGGAGCCAGGATCTTTGTAGCTCCTaGGAAAAAGACTGTAACGGC +
Preference number: 4 (lower is better)
Translates to: PLPFPEAQEPFRAGHRSQDLCSS*EKDCNG
Trigger: GCCGTTACAGTCTTTTTCTCAGGAGCTACAAAGATC...CTGGCTCCTATGCCCTGCCCTAAAGGGCTCTTGAGCCTCTGGGAATGGGAGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000217121.9
ENST00000346249.9
ENST00000348257.9
ENST00000351424.8
ENST00000352482.8
ENST00000358548.4
ENST00000611972.4
ENST00000615907.4
CDS-3UTR GCA 90 bp CGGCTCTGCTCATCCGCCCTGGCTGGCTGCTCCGCTGAACAGAGCTGCGGCTGTTTTCCCCCAAAGGAATaGTTTATTGACAAATTACCC +
Preference number: 4 (lower is better)
Translates to: RLCSSALAGCSAEQSCGCFPPKE*FIDKLP
Trigger: GGGTAATTTGTCAATAAAGCATTCCTTTGGGGGAAA...ACAGCCGCAGCTCTGTTCAGCGGAGCAGCCAGCCAGGGCGGATGAGCAGAGCCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000217121.9
ENST00000346249.9
ENST00000348257.9
ENST00000351424.8
ENST00000352482.8
ENST00000358548.4
ENST00000611972.4
CDS-3UTR CCA 90 bp CCCTCCCATTCCCAGAGGCTCAAGAGCCCTTTAGGGCAGGGCATAGGAGCCAGCTCGCAGAGTTCCTCATaGCTGGCATACTTATTGAGT +
Preference number: 4 (lower is better)
Translates to: PSHSQRLKSPLGQGIGASSQSSS*LAYLLS
Trigger: ACTCAATAAGTATGCCAGCCATGAGGAACTCTGCGA...GCTGGCTCCTATGCCCTGCCCTAAAGGGCTCTTGAGCCTCTGGGAATGGGAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217121.9
ENST00000351424.8
ENST00000352482.8
ENST00000358548.4
CDS-3UTR CCA 90 bp CTCTGCTCATCCGCCCTGGCTGGCTGCTCCGCTGAACAGAGCTGCGGCTGTGATTTTTGTACACTGGGATaGAGTGTGCGTGACATAAAA +
Preference number: 4 (lower is better)
Translates to: LCSSALAGCSAEQSCGCDFCTLG*SVRDIK
Trigger: TTTTATGTCACGCACACTCCATCCCAGTGTACAAAA...ATCACAGCCGCAGCTCTGTTCAGCGGAGCAGCCAGCCAGGGCGGATGAGCAGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000217121.9
ENST00000346249.9
ENST00000348257.9
ENST00000351424.8
ENST00000352482.8
ENST00000358548.4
ENST00000611972.4
CDS-3UTR CCA 90 bp AGGCTCAAGAGCCCTTTAGGGCAGGGCATAGGAGCCAGCGGGAGCTGCCACGGTTTTTGTACACTGGGATaGAGTGTGCGTGACATAAAA +
Preference number: 4 (lower is better)
Translates to: RLKSPLGQGIGASGSCHGFCTLG*SVRDIK
Trigger: TTTTATGTCACGCACACTCCATCCCAGTGTACAAAA...ACCGTGGCAGCTCCCGCTGGCTCCTATGCCCTGCCCTAAAGGGCTCTTGAGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000217121.9
ENST00000346249.9
ENST00000348257.9
ENST00000351424.8
ENST00000352482.8
ENST00000358548.4
ENST00000611972.4
ENST00000615907.4
CDS-3UTR GCA 90 bp CCAGAGGCTCAAGAGCCCTTTAGGGCAGGGCATAGGAGCCAGCGGGAGCTGCCATTTCCCCCAAAGGAATaGTTTATTGACAAATTACCC +
Preference number: 4 (lower is better)
Translates to: PEAQEPFRAGHRSQRELPFPPKE*FIDKLP
Trigger: GGGTAATTTGTCAATAAAGCATTCCTTTGGGGGAAA...TGGCAGCTCCCGCTGGCTCCTATGCCCTGCCCTAAAGGGCTCTTGAGCCTCTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000217121.9
ENST00000346249.9
ENST00000348257.9
ENST00000351424.8
ENST00000352482.8
ENST00000358548.4
ENST00000611972.4
ENST00000615907.4
CDS-3UTR GCA 90 bp AGGCTCAAGAGCCCTTTAGGGCAGGGCATAGGAGCCAGCGGGAGCTGCCACGGTTTTCCCCCAAAGGAATaGTTTATTGACAAATTACCC +
Preference number: 4 (lower is better)
Translates to: RLKSPLGQGIGASGSCHGFPPKE*FIDKLP
Trigger: GGGTAATTTGTCAATAAAGCATTCCTTTGGGGGAAA...ACCGTGGCAGCTCCCGCTGGCTCCTATGCCCTGCCCTAAAGGGCTCTTGAGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000217121.9
ENST00000346249.9
ENST00000348257.9
ENST00000351424.8
ENST00000352482.8
ENST00000358548.4
ENST00000611972.4
ENST00000615907.4
CDS-3UTR CCA 90 bp CCCCTCCCATTCCCAGAGGCTCAAGAGCCCTTTAGGGCAGGGCATAGGAGCCAGTTTTGTACACTGGGATaGAGTGTGCGTGACATAAAA +
Preference number: 4 (lower is better)
Translates to: PLPFPEAQEPFRAGHRSQFCTLG*SVRDIK
Trigger: TTTTATGTCACGCACACTCCATCCCAGTGTACAAAA...CTGGCTCCTATGCCCTGCCCTAAAGGGCTCTTGAGCCTCTGGGAATGGGAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000217121.9
ENST00000346249.9
ENST00000348257.9
ENST00000351424.8
ENST00000352482.8
ENST00000358548.4
ENST00000611972.4
ENST00000615907.4
CDS-3UTR GCA 90 bp CCCCTCCCATTCCCAGAGGCTCAAGAGCCCTTTAGGGCAGGGCATAGGAGCCAGTTTCCCCCAAAGGAATaGTTTATTGACAAATTACCC +
Preference number: 4 (lower is better)
Translates to: PLPFPEAQEPFRAGHRSQFPPKE*FIDKLP
Trigger: GGGTAATTTGTCAATAAAGCATTCCTTTGGGGGAAA...CTGGCTCCTATGCCCTGCCCTAAAGGGCTCTTGAGCCTCTGGGAATGGGAGGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000217121.9
ENST00000346249.9
ENST00000348257.9
ENST00000351424.8
ENST00000352482.8
ENST00000358548.4
ENST00000611972.4
ENST00000615907.4
CDS-3UTR GCA 90 bp CCATTCCCAGAGGCTCAAGAGCCCTTTAGGGCAGGGCATAGGAGCCAGCGGGAGTTTCCCCCAAAGGAATaGTTTATTGACAAATTACCC +
Preference number: 4 (lower is better)
Translates to: PFPEAQEPFRAGHRSQREFPPKE*FIDKLP
Trigger: GGGTAATTTGTCAATAAAGCATTCCTTTGGGGGAAA...CTCCCGCTGGCTCCTATGCCCTGCCCTAAAGGGCTCTTGAGCCTCTGGGAATGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000217121.9
ENST00000346249.9
ENST00000348257.9
ENST00000351424.8
ENST00000352482.8
ENST00000358548.4
ENST00000611972.4
ENST00000615907.4
CDS-3UTR GCA 90 bp CCCTCCCATTCCCAGAGGCTCAAGAGCCCTTTAGGGCAGGGCATAGGAGCCAGCTTTCCCCCAAAGGAATaGTTTATTGACAAATTACCC +
Preference number: 4 (lower is better)
Translates to: PSHSQRLKSPLGQGIGASFPPKE*FIDKLP
Trigger: GGGTAATTTGTCAATAAAGCATTCCTTTGGGGGAAA...GCTGGCTCCTATGCCCTGCCCTAAAGGGCTCTTGAGCCTCTGGGAATGGGAGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000217121.9
ENST00000346249.9
ENST00000348257.9
ENST00000351424.8
ENST00000352482.8
ENST00000358548.4
ENST00000611972.4
ENST00000615907.4
CDS CCA 90 bp GGAGTCCATGTTCGGGCGGCGTCCGGACCGCTGTCGCGGGCGCTATaGGAGCCGAGCGGGCGGCGCCGGGAGAAGCTCGCCGCGTACACA +
Preference number: 5 (lower is better)
Translates to: GVHVRAASGPLSRAL*EPSGRRREKLAAYT
Trigger: TGTGTACGCGGCGAGCTTCTCCCGGCGCCGCCCGCTCGGCTCCCATAGCGCCCGCGACAGCGGTCCGGACGCCGCCCGAACATGGACTCC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346249.9
ENST00000369927.8
ENST00000611972.4
ENST00000615907.4
CDS CCA 90 bp CCTCCCGGTTCCAGCAGAAGGGCACGTGCTGGCGGCGCCCCGGCTTaGCCTAGAGGAGCTTGCTCTGGTCTGCAGGAGGGCCCTTTGGGA +
Preference number: 5 (lower is better)
Translates to: PPGSSRRARAGGAPA*PRGACSGLQEGPLG
Trigger: TCCCAAAGGGCCCTCCTGCAGACCAGAGCAAGCTCCTCTAGGCCAAGCCGGGGCGCCGCCAGCACGTGCCCTTCTGCTGGAACCGGGAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474176.2
CDS GCA 90 bp AGAAGGGCACGTGCTGGCGGCGCCCCGGCTTGGCCTAGAGGAGCTTaGTCTGGTCTGCAGGAGGGCCCTTTGGGAGGCACACCTATGGGC +
Preference number: 5 (lower is better)
Translates to: RRARAGGAPAWPRGA*SGLQEGPLGGTPMG
Trigger: GCCCATAGGTGTGCCTCCCAAAGGGCCCTCCTGCAGACCAGAGCAAGCTCCTCTAGGCCAAGCCGGGGCGCCGCCAGCACGTGCCCTTCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474176.2
CDS-3UTR CAA 90 bp CGGCTCTGCTCATCCGCCCTGGCTGGCTGCTCCGCTGAACAGAGCTGCGGCTGTGGATCCGACAGGGGCTaGTCACCACTCCCCGCTGAG +
Preference number: 5 (lower is better)
Translates to: RLCSSALAGCSAEQSCGCGSDRG*SPLPAE
Trigger: CTCAGCGGGGAGTGGTGACAAGCCCCTGTCGGATCC...ACAGCCGCAGCTCTGTTCAGCGGAGCAGCCAGCCAGGGCGGATGAGCAGAGCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000217121.9
ENST00000346249.9
ENST00000348257.9
ENST00000351424.8
ENST00000352482.8
ENST00000358548.4
ENST00000369927.8
ENST00000611972.4
CDS-3UTR CAA 90 bp CTCTGCTCATCCGCCCTGGCTGGCTGCTCCGCTGAACAGAGCTGCGGCTGTGATCCGGGCAGCCACACCTaGGCCGGCGGAGTCCATGTT +
Preference number: 5 (lower is better)
Translates to: LCSSALAGCSAEQSCGCDPGSHT*AGGVHV
Trigger: AACATGGACTCCGCCGGCCAAGGTGTGGCTGCCCGG...ATCACAGCCGCAGCTCTGTTCAGCGGAGCAGCCAGCCAGGGCGGATGAGCAGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369927.8
CDS-3UTR CAA 90 bp CTCTGCTCATCCGCCCTGGCTGGCTGCTCCGCTGAACAGAGCTGCGGCTGTGATGGATCCGACAGGGGCTaGTCACCACTCCCCGCTGAG +
Preference number: 5 (lower is better)
Translates to: LCSSALAGCSAEQSCGCDGSDRG*SPLPAE
Trigger: CTCAGCGGGGAGTGGTGACAAGCCCCTGTCGGATCC...ATCACAGCCGCAGCTCTGTTCAGCGGAGCAGCCAGCCAGGGCGGATGAGCAGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000217121.9
ENST00000346249.9
ENST00000348257.9
ENST00000351424.8
ENST00000352482.8
ENST00000358548.4
ENST00000369927.8
ENST00000611972.4
CDS-3UTR CAA 90 bp CCCCTCCCATTCCCAGAGGCTCAAGAGCCCTTTAGGGCAGGGCATAGGAGCCAGGGATCCGACAGGGGCTaGTCACCACTCCCCGCTGAG +
Preference number: 5 (lower is better)
Translates to: PLPFPEAQEPFRAGHRSQGSDRG*SPLPAE
Trigger: CTCAGCGGGGAGTGGTGACAAGCCCCTGTCGGATCC...CTGGCTCCTATGCCCTGCCCTAAAGGGCTCTTGAGCCTCTGGGAATGGGAGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000217121.9
ENST00000346249.9
ENST00000348257.9
ENST00000351424.8
ENST00000352482.8
ENST00000358548.4
ENST00000611972.4
ENST00000615907.4
CDS-3UTR CAA 90 bp CCCTCCCATTCCCAGAGGCTCAAGAGCCCTTTAGGGCAGGGCATAGGAGCCAGCGGATCCGACAGGGGCTaGTCACCACTCCCCGCTGAG +
Preference number: 5 (lower is better)
Translates to: PSHSQRLKSPLGQGIGASGSDRG*SPLPAE
Trigger: CTCAGCGGGGAGTGGTGACAAGCCCCTGTCGGATCC...GCTGGCTCCTATGCCCTGCCCTAAAGGGCTCTTGAGCCTCTGGGAATGGGAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000217121.9
ENST00000346249.9
ENST00000348257.9
ENST00000351424.8
ENST00000352482.8
ENST00000358548.4
ENST00000611972.4
ENST00000615907.4
CDS-3UTR CAA 90 bp CGGCTCTGCTCATCCGCCCTGGCTGGCTGCTCCGCTGAACAGAGCTGCGGCTGTCGGTCCTCAAACGACTaGAAGGTCGCAGAGTTCCTC +
Preference number: 5 (lower is better)
Translates to: RLCSSALAGCSAEQSCGCRSSND*KVAEFL
Trigger: GAGGAACTCTGCGACCTTCAAGTCGTTTGAGGACCG...ACAGCCGCAGCTCTGTTCAGCGGAGCAGCCAGCCAGGGCGGATGAGCAGAGCCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000217121.9
ENST00000346249.9
ENST00000348257.9
ENST00000351424.8
ENST00000352482.8
ENST00000358548.4
ENST00000369927.8
CDS-3UTR CAA 90 bp CGGCTCTGCTCATCCGCCCTGGCTGGCTGCTCCGCTGAACAGAGCTGCGGCTGTATTTCCTCTTCCACCTaGGTAAGCTCAGCCCTGAGC +
Preference number: 5 (lower is better)
Translates to: RLCSSALAGCSAEQSCGCISSST*VSSALS
Trigger: GCTCAGGGCTGAGCTTACCAAGGTGGAAGAGGAAAT...ACAGCCGCAGCTCTGTTCAGCGGAGCAGCCAGCCAGGGCGGATGAGCAGAGCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000217121.9
ENST00000346249.9
ENST00000348257.9
ENST00000351424.8
ENST00000352482.8
ENST00000358548.4
ENST00000369927.8
ENST00000611972.4
CDS-3UTR CAA 90 bp AGGCTCAAGAGCCCTTTAGGGCAGGGCATAGGAGCCAGCGGGAGCTGCCACGGTCGGTCCTCAAACGACTaGAAGGTCGCAGAGTTCGCG +
Preference number: 5 (lower is better)
Translates to: RLKSPLGQGIGASGSCHGRSSND*KVAEFA
Trigger: CGCGAACTCTGCGACCTTCAAGTCGTTTGAGGACCG...ACCGTGGCAGCTCCCGCTGGCTCCTATGCCCTGCCCTAAAGGGCTCTTGAGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611972.4
CDS TCA 90 bp GCTCTGGGTGTTTCCGTGAAGGCTGAGACCGTGAAGTGTCCTGAGTaGCAGCCCACCAGGGCAAGTGCCAGGATCTGTGTGCGAGCCCCT +
Preference number: 5 (lower is better)
Translates to: ALGVSVKAETVKCPE*QPTRASARICVRAP
Trigger: AGGGGCTCGCACACAGATCCTGGCACTTGCCCTGGTGGGCTGTCACTCAGGACACTTCACGGTCTCAGCCTTCACGGAAACACCCAGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474176.2
CDS-3UTR CAA 90 bp CGGCTCTGCTCATCCGCCCTGGCTGGCTGCTCCGCTGAACAGAGCTGCGGCTGTATTCAGGTTGATATCTaGGCCGGCGGAGTCCATGTT +
Preference number: 5 (lower is better)
Translates to: RLCSSALAGCSAEQSCGCIQVDI*AGGVHV
Trigger: AACATGGACTCCGCCGGCCAAGATATCAACCTGAAT...ACAGCCGCAGCTCTGTTCAGCGGAGCAGCCAGCCAGGGCGGATGAGCAGAGCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000217121.9
ENST00000346249.9
ENST00000348257.9
ENST00000351424.8
ENST00000352482.8
ENST00000358548.4
ENST00000611972.4
CDS-3UTR CAA 90 bp AGGCTCAAGAGCCCTTTAGGGCAGGGCATAGGAGCCAGCGGGAGCTGCCACGGTCGGTCCTCAAACGACTaGAAGGTCGCAGAGTTCCTC +
Preference number: 5 (lower is better)
Translates to: RLKSPLGQGIGASGSCHGRSSND*KVAEFL
Trigger: GAGGAACTCTGCGACCTTCAAGTCGTTTGAGGACCG...ACCGTGGCAGCTCCCGCTGGCTCCTATGCCCTGCCCTAAAGGGCTCTTGAGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000217121.9
ENST00000346249.9
ENST00000348257.9
ENST00000351424.8
ENST00000352482.8
ENST00000358548.4
CDS-3UTR CAA 90 bp CTCTGCTCATCCGCCCTGGCTGGCTGCTCCGCTGAACAGAGCTGCGGCTGTGATCGGTCCTCAAACGACTaGAAGGTCGCAGAGTTCCTC +
Preference number: 5 (lower is better)
Translates to: LCSSALAGCSAEQSCGCDRSSND*KVAEFL
Trigger: GAGGAACTCTGCGACCTTCAAGTCGTTTGAGGACCG...ATCACAGCCGCAGCTCTGTTCAGCGGAGCAGCCAGCCAGGGCGGATGAGCAGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000217121.9
ENST00000346249.9
ENST00000348257.9
ENST00000351424.8
ENST00000352482.8
ENST00000358548.4
ENST00000369927.8
CDS-3UTR CAA 90 bp CCAGAGGCTCAAGAGCCCTTTAGGGCAGGGCATAGGAGCCAGCGGGAGCTGCCAATTTCCTCTTCCACCTaGGTAAGCTCAGCCCTGAGC +
Preference number: 5 (lower is better)
Translates to: PEAQEPFRAGHRSQRELPISSST*VSSALS
Trigger: GCTCAGGGCTGAGCTTACCAAGGTGGAAGAGGAAAT...TGGCAGCTCCCGCTGGCTCCTATGCCCTGCCCTAAAGGGCTCTTGAGCCTCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000217121.9
ENST00000346249.9
ENST00000348257.9
ENST00000351424.8
ENST00000352482.8
ENST00000358548.4
ENST00000611972.4
ENST00000615907.4
CDS-3UTR CAA 90 bp CTCTGCTCATCCGCCCTGGCTGGCTGCTCCGCTGAACAGAGCTGCGGCTGTGATATTTCCTCTTCCACCTaGGTAAGCTCAGCCCTGAGC +
Preference number: 5 (lower is better)
Translates to: LCSSALAGCSAEQSCGCDISSST*VSSALS
Trigger: GCTCAGGGCTGAGCTTACCAAGGTGGAAGAGGAAAT...ATCACAGCCGCAGCTCTGTTCAGCGGAGCAGCCAGCCAGGGCGGATGAGCAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000217121.9
ENST00000346249.9
ENST00000348257.9
ENST00000351424.8
ENST00000352482.8
ENST00000358548.4
ENST00000369927.8
ENST00000611972.4
CDS-3UTR CAA 90 bp CCCTCCCATTCCCAGAGGCTCAAGAGCCCTTTAGGGCAGGGCATAGGAGCCAGCCGGTCCTCAAACGACTaGAAGGTCGCAGAGTTCCTC +
Preference number: 5 (lower is better)
Translates to: PSHSQRLKSPLGQGIGASRSSND*KVAEFL
Trigger: GAGGAACTCTGCGACCTTCAAGTCGTTTGAGGACCG...GCTGGCTCCTATGCCCTGCCCTAAAGGGCTCTTGAGCCTCTGGGAATGGGAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000217121.9
ENST00000346249.9
ENST00000348257.9
ENST00000351424.8
ENST00000352482.8
ENST00000358548.4
CDS TCA 90 bp ACTGTGAGACAGCCAGGTCATTCCGGAGACTCCCCAGGTCAAAAGTaGGGTCGGCCATGCCCAACAACCACAGGGACAGGTCCAGACGTC +
Preference number: 5 (lower is better)
Translates to: TVRQPGHSGDSPGQK*GRPCPTTTGTGPDV
Trigger: GACGTCTGGACCTGTCCCTGTGGTTGTTGGGCATGGCCGACCTCACTTTTGACCTGGGGAGTCTCCGGAATGACCTGGCTGTCTCACAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474176.2
CDS GCA 90 bp AACGACTTGAAGGTCGCAGAGTTCGCGCTAGAGACCTGCACGTCATaGCAGCTCCTGGACAGGTTCTGTTTCAGCTCCCCCAGGGTGGAG +
Preference number: 5 (lower is better)
Translates to: NDLKVAEFALETCTS*QLLDRFCFSSPRVE
Trigger: CTCCACCCTGGGGGAGCTGAAACAGAACCTGTCCAGGAGCTGGCATGACGTGCAGGTCTCTAGCGCGAACTCTGCGACCTTCAAGTCGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000611972.4
CDS-3UTR CAA 90 bp CCAGAGGCTCAAGAGCCCTTTAGGGCAGGGCATAGGAGCCAGCGGGAGCTGCCAATTCAGGTTGATATCTaGGCCGGCGGAGTCCATGTT +
Preference number: 5 (lower is better)
Translates to: PEAQEPFRAGHRSQRELPIQVDI*AGGVHV
Trigger: AACATGGACTCCGCCGGCCAAGATATCAACCTGAAT...TGGCAGCTCCCGCTGGCTCCTATGCCCTGCCCTAAAGGGCTCTTGAGCCTCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000217121.9
ENST00000346249.9
ENST00000348257.9
ENST00000351424.8
ENST00000352482.8
ENST00000358548.4
ENST00000611972.4
ENST00000615907.4
CDS-3UTR CAA 90 bp CTCTGCTCATCCGCCCTGGCTGGCTGCTCCGCTGAACAGAGCTGCGGCTGTGATATTCAGGTTGATATCTaGGCCGGCGGAGTCCATGTT +
Preference number: 5 (lower is better)
Translates to: LCSSALAGCSAEQSCGCDIQVDI*AGGVHV
Trigger: AACATGGACTCCGCCGGCCAAGATATCAACCTGAAT...ATCACAGCCGCAGCTCTGTTCAGCGGAGCAGCCAGCCAGGGCGGATGAGCAGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000217121.9
ENST00000346249.9
ENST00000348257.9
ENST00000351424.8
ENST00000352482.8
ENST00000358548.4
ENST00000611972.4
CDS-3UTR CAA 90 bp CCCTCCCATTCCCAGAGGCTCAAGAGCCCTTTAGGGCAGGGCATAGGAGCCAGCATTTCCTCTTCCACCTaGGTAAGCTCAGCCCTGAGC +
Preference number: 5 (lower is better)
Translates to: PSHSQRLKSPLGQGIGASISSST*VSSALS
Trigger: GCTCAGGGCTGAGCTTACCAAGGTGGAAGAGGAAAT...GCTGGCTCCTATGCCCTGCCCTAAAGGGCTCTTGAGCCTCTGGGAATGGGAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000217121.9
ENST00000346249.9
ENST00000348257.9
ENST00000351424.8
ENST00000352482.8
ENST00000358548.4
ENST00000611972.4
ENST00000615907.4
CDS-3UTR CAA 90 bp CCATTCCCAGAGGCTCAAGAGCCCTTTAGGGCAGGGCATAGGAGCCAGCGGGAGATTTCCTCTTCCACCTaGGTAAGCTCAGCCCTGAGC +
Preference number: 5 (lower is better)
Translates to: PFPEAQEPFRAGHRSQREISSST*VSSALS
Trigger: GCTCAGGGCTGAGCTTACCAAGGTGGAAGAGGAAAT...CTCCCGCTGGCTCCTATGCCCTGCCCTAAAGGGCTCTTGAGCCTCTGGGAATGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000217121.9
ENST00000346249.9
ENST00000348257.9
ENST00000351424.8
ENST00000352482.8
ENST00000358548.4
ENST00000611972.4
ENST00000615907.4
CDS-3UTR CAA 90 bp CCCCTCCCATTCCCAGAGGCTCAAGAGCCCTTTAGGGCAGGGCATAGGAGCCAGATTTCCTCTTCCACCTaGGTAAGCTCAGCCCTGAGC +
Preference number: 5 (lower is better)
Translates to: PLPFPEAQEPFRAGHRSQISSST*VSSALS
Trigger: GCTCAGGGCTGAGCTTACCAAGGTGGAAGAGGAAAT...CTGGCTCCTATGCCCTGCCCTAAAGGGCTCTTGAGCCTCTGGGAATGGGAGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000217121.9
ENST00000346249.9
ENST00000348257.9
ENST00000351424.8
ENST00000352482.8
ENST00000358548.4
ENST00000611972.4
ENST00000615907.4
CDS-3UTR CAA 90 bp CCATTCCCAGAGGCTCAAGAGCCCTTTAGGGCAGGGCATAGGAGCCAGCGGGAGATTCAGGTTGATATCTaGGCCGGCGGAGTCCATGTT +
Preference number: 5 (lower is better)
Translates to: PFPEAQEPFRAGHRSQREIQVDI*AGGVHV
Trigger: AACATGGACTCCGCCGGCCAAGATATCAACCTGAAT...CTCCCGCTGGCTCCTATGCCCTGCCCTAAAGGGCTCTTGAGCCTCTGGGAATGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000217121.9
ENST00000346249.9
ENST00000348257.9
ENST00000351424.8
ENST00000352482.8
ENST00000358548.4
ENST00000611972.4
ENST00000615907.4
CDS-3UTR CAA 90 bp CCCTCCCATTCCCAGAGGCTCAAGAGCCCTTTAGGGCAGGGCATAGGAGCCAGCTTAGGAGAATTCAGGTaGATATCTTGGCCGGCGGAG +
Preference number: 5 (lower is better)
Translates to: PSHSQRLKSPLGQGIGASLGEFR*ISWPAE
Trigger: CTCCGCCGGCCAAGATATCAACCTGAATTCTCCTAA...GCTGGCTCCTATGCCCTGCCCTAAAGGGCTCTTGAGCCTCTGGGAATGGGAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000217121.9
ENST00000346249.9
ENST00000348257.9
ENST00000351424.8
ENST00000352482.8
ENST00000358548.4
ENST00000611972.4
ENST00000615907.4
CDS GCA 72 bp CGTGCTGGCGGCGCCCCGGCTTGGCCTAGAGGAGCTTaGTCTGGTCTGCAGGAGGGCCCTTTGGGAGGCACA +
Preference number: 6 (lower is better)
Translates to: RAGGAPAWPRGA*SGLQEGPLGGT
Trigger: TGTGCCTCCCAAAGGGCCCTCCTGCAGACCAGAGCAAGCTCCTCTAGGCCAAGCCGGGGCGCCGCCAGCACG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474176.2
CDS CCA 72 bp TCCAGCAGAAGGGCACGTGCTGGCGGCGCCCCGGCTTaGCCTAGAGGAGCTTGCTCTGGTCTGCAGGAGGGC +
Preference number: 6 (lower is better)
Translates to: SSRRARAGGAPA*PRGACSGLQEG
Trigger: GCCCTCCTGCAGACCAGAGCAAGCTCCTCTAGGCCAAGCCGGGGCGCCGCCAGCACGTGCCCTTCTGCTGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474176.2
CDS GCA 72 bp GCGCCCCGGCTTGGCCTAGAGGAGCTTGCTCTGGTCTaGAGGAGGGCCCTTTGGGAGGCACACCTATGGGCT +
Preference number: 6 (lower is better)
Translates to: APRLGLEELALV*RRALWEAHLWA
Trigger: AGCCCATAGGTGTGCCTCCCAAAGGGCCCTCCTGCAGACCAGAGCAAGCTCCTCTAGGCCAAGCCGGGGCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474176.2
CDS GCA 72 bp GGAGAAGCTCGCCGCGTACACACTAGCCAGCGGAACTaGCTCAGCTCCGCGGCGTTTCGTAATCCGCGATGC +
Preference number: 6 (lower is better)
Translates to: GEARRVHTSQRN*LSSAAFRNPRC
Trigger: GCATCGCGGATTACGAAACGCCGCGGAGCTGAGGCAGTTCCGCTGGCTAGTGTGTACGCGGCGAGCTTCTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611972.4
ENST00000615907.4
CDS TCA 72 bp TGCGGGATCCGACAGGGGCTTGTCACCACTCCCCGCTaGGGAAGGGAGGTTGTCACTGCCGTTCTCTCTGTC +
Preference number: 6 (lower is better)
Translates to: CGIRQGLVTTPR*GREVVTAVLSV
Trigger: GACAGAGAGAACGGCAGTGACAACCTCCCTTCCTCAGCGGGGAGTGGTGACAAGCCCCTGTCGGATCCCGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000217121.9
ENST00000346249.9
ENST00000348257.9
ENST00000351424.8
ENST00000352482.8
ENST00000358548.4
ENST00000369927.8
ENST00000474176.2
ENST00000611972.4
ENST00000615907.4
CDS CCA 72 bp CACACACAACCCCAACTTGGCAGGGATGGGCAGAGCTaGGATTCCCCCACTCCCAGCAGTTGGAGCGAGCTG +
Preference number: 6 (lower is better)
Translates to: HTQPQLGRDGQS*DSPTPSSWSEL
Trigger: CAGCTCGCTCCAACTGCTGGGAGTGGGGGAATCCCAGCTCTGCCCATCCCTGCCAAGTTGGGGTTGTGTGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000474176.2
CDS TCA 72 bp CAGCCAGGTCATTCCGGAGACTCCCCAGGTCAAAAGTaGGGTCGGCCATGCCCAACAACCACAGGGACAGGT +
Preference number: 6 (lower is better)
Translates to: QPGHSGDSPGQK*GRPCPTTTGTG
Trigger: ACCTGTCCCTGTGGTTGTTGGGCATGGCCGACCTCACTTTTGACCTGGGGAGTCTCCGGAATGACCTGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474176.2
CDS GCA 72 bp AAGGTCGCAGAGTTCGCGCTAGAGACCTGCACGTCATaGCAGCTCCTGGACAGGTTCTGTTTCAGCTCCCCC +
Preference number: 6 (lower is better)
Translates to: KVAEFALETCTS*QLLDRFCFSSP
Trigger: GGGGGAGCTGAAACAGAACCTGTCCAGGAGCTGGCATGACGTGCAGGTCTCTAGCGCGAACTCTGCGACCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611972.4
CDS CAA 72 bp CCTAGAGGAGCTTGCTCTGGTCTGCAGGAGGGCCCTTaGGGAGGCACACCTATGGGCTCTCGGGTAGTAAAC +
Preference number: 6 (lower is better)
Translates to: PRGACSGLQEGP*GGTPMGSRVVN
Trigger: GTTTACTACCCGAGAGCCCATAGGTGTGCCTCCCAAAGGGCCCTCCTGCAGACCAGAGCAAGCTCCTCTAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474176.2
CDS CAA 90 bp CCGGCTTGGCCTAGAGGAGCTTGCTCTGGTCTGCAGGAGGGCCCTTaGGGAGGCACACCTATGGGCTCTCGGGTAGTAAACAAGACAAAA +
Preference number: 6 (lower is better)
Translates to: PAWPRGACSGLQEGP*GGTPMGSRVVNKTK
Trigger: TTTTGTCTTGTTTACTACCCGAGAGCCCATAGGTGTGCCTCCCAAAGGGCCCTCCTGCAGACCAGAGCAAGCTCCTCTAGGCCAAGCCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474176.2
CDS TCA 72 bp GCCAGGGTCAGGACTTGGAAAGGACACGGCCCAGTTTaGCACAAGGATCTCCTCTGGAGGCTGCAGGTGAAG +
Preference number: 6 (lower is better)
Translates to: ARVRTWKGHGPV*HKDLLWRLQVK
Trigger: CTTCACCTGCAGCCTCCAGAGGAGATCCTTGTGTCAAACTGGGCCGTGTCCTTTCCAAGTCCTGACCCTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474176.2
CDS TCA 72 bp GTTTCCGTGAAGGCTGAGACCGTGAAGTGTCCTGAGTaGCAGCCCACCAGGGCAAGTGCCAGGATCTGTGTG +
Preference number: 6 (lower is better)
Translates to: VSVKAETVKCPE*QPTRASARICV
Trigger: CACACAGATCCTGGCACTTGCCCTGGTGGGCTGTCACTCAGGACACTTCACGGTCTCAGCCTTCACGGAAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474176.2
CDS CAA 72 bp GAGAGAGGGAAGAGTGTCGGTGTCAAGAGGAGAGGGTaGTGCTGCTCTCCTAACTCGGAAGGGCCTCAGGGT +
Preference number: 6 (lower is better)
Translates to: ERGKSVGVKRRG*CCSPNSEGPQG
Trigger: ACCCTGAGGCCCTTCCGAGTTAGGAGAGCAGCACAACCCTCTCCTCTTGACACCGACACTCTTCCCTCTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474176.2
CDS CCA 72 bp GCCAAGGGAATGGAGTCCTCAATTAATCCAGGAATATaGGAAGGGCAAGGTGTAACCGGCGGGAGCTGCCCC +
Preference number: 6 (lower is better)
Translates to: AKGMESSINPGI*EGQGVTGGSCP
Trigger: GGGGCAGCTCCCGCCGGTTACACCTTGCCCTTCCCATATTCCTGGATTAATTGAGGACTCCATTCCCTTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474176.2
CDS GCA 72 bp AACGACTTGAAGGTCGCAGAGTTCGCGCTAGAGACCTaGACGTCATGCCAGCTCCTGGACAGGTTCTGTTTC +
Preference number: 6 (lower is better)
Translates to: NDLKVAEFALET*TSCQLLDRFCF
Trigger: GAAACAGAACCTGTCCAGGAGCTGGCATGACGTGCAGGTCTCTAGCGCGAACTCTGCGACCTTCAAGTCGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611972.4
CDS CAA 90 bp AGAAGGAAGCAAGAGTTAACACCAAGATCCACACACAACCCCAACTaGGCAGGGATGGGCAGAGCTGGGATTCCCCCACTCCCAGCAGTT +
Preference number: 6 (lower is better)
Translates to: RRKQELTPRSTHNPN*AGMGRAGIPPLPAV
Trigger: AACTGCTGGGAGTGGGGGAATCCCAGCTCTGCCCATCCCTGCCAAGTTGGGGTTGTGTGTGGATCTTGGTGTTAACTCTTGCTTCCTTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000474176.2
CDS CAA 72 bp TTAGACTTTATGGTCCCAACTCGGTCCTCAAACGACTaGAAGGTCGCAGAGTTCGCGCTAGAGACCTGCACG +
Preference number: 6 (lower is better)
Translates to: LDFMVPTRSSND*KVAEFALETCT
Trigger: CGTGCAGGTCTCTAGCGCGAACTCTGCGACCTTCAAGTCGTTTGAGGACCGAGTTGGGACCATAAAGTCTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611972.4
CDS CAA 90 bp CCTGTGTCGACAGGAACATCCGTCATGGAGTCAGACAGCAGACCTTaGTTAGGAGAATTCAGGTTGATATCTTGGCCGGCGGAGTCCATG +
Preference number: 6 (lower is better)
Translates to: PVSTGTSVMESDSRP*LGEFRLISWPAESM
Trigger: CATGGACTCCGCCGGCCAAGATATCAACCTGAATTCTCCTAACAAAGGTCTGCTGTCTGACTCCATGACGGATGTTCCTGTCGACACAGG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000217121.9
ENST00000346249.9
ENST00000348257.9
ENST00000351424.8
ENST00000352482.8
ENST00000358548.4
ENST00000611972.4
ENST00000615907.4
CDS CCA 72 bp TTACCGGCCCTTAGTCATCAGAGGTTGCCAAGGGAATaGAGTCCTCAATTAATCCAGGAATATGGGAAGGGC +
Preference number: 6 (lower is better)
Translates to: LPALSHQRLPRE*SPQLIQEYGKG
Trigger: GCCCTTCCCATATTCCTGGATTAATTGAGGACTCCATTCCCTTGGCAACCTCTGATGACTAAGGGCCGGTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474176.2
CDS CAA 72 bp ACAGGAACATCCGTCATGGAGTCAGACAGCAGACCTTaGTTAGGAGAATTCAGGTTGATATCTTGGCCGGCG +
Preference number: 6 (lower is better)
Translates to: TGTSVMESDSRP*LGEFRLISWPA
Trigger: CGCCGGCCAAGATATCAACCTGAATTCTCCTAACAAAGGTCTGCTGTCTGACTCCATGACGGATGTTCCTGT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000217121.9
ENST00000346249.9
ENST00000348257.9
ENST00000351424.8
ENST00000352482.8
ENST00000358548.4
ENST00000611972.4
ENST00000615907.4
CDS CAA 72 bp TTAGACTTTATGGTCCCAACTCGGTCCTCAAACGACTaGAAGGTCGCAGAGTTCCTCATGGCTGGCATACTT +
Preference number: 6 (lower is better)
Translates to: LDFMVPTRSSND*KVAEFLMAGIL
Trigger: AAGTATGCCAGCCATGAGGAACTCTGCGACCTTCAAGTCGTTTGAGGACCGAGTTGGGACCATAAAGTCTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217121.9
ENST00000351424.8
ENST00000352482.8
ENST00000358548.4