RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TPCN2 (Homo sapiens)

Ensembl gene IDs: ENSG00000162341

Ensembl transcript IDs: ENST00000294309.8, ENST00000442692.2, ENST00000534832.1, ENST00000535009.5, ENST00000542467.1, ENST00000635811.1, ENST00000637342.1, ENST00000637504.1

Found 711 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CATGACGGGCACCTGTGTAGGCCAGCCTCTCTCTCCTGCCGCCCCTaGTGGGACGGCAGCCCGGACGTCACCTGCACAGCCACAGGTGCG +
Preference number: 1 (lower is better)
Translates to: HDGHLCRPASLSCRP*WDGSPDVTCTATGA
Trigger: CGCACCTGTGGCTGTGCAGGTGACGTCCGGGCTGCCGTCCCAGCAGGGGCGGCAGGAGAGAGAGGCTGGCCTACACAGGTGCCCGTCATG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635811.1
3UTR GCA 90 bp CGCCTCTTCCATGACGGGCACCTGTGTAGGCCAGCCTCTCTCTCCTaGCGCCCCTGCTGGGACGGCAGCCCGGACGTCACCTGCACAGCC +
Preference number: 1 (lower is better)
Translates to: RLFHDGHLCRPASLS*RPCWDGSPDVTCTA
Trigger: GGCTGTGCAGGTGACGTCCGGGCTGCCGTCCCAGCAGGGGCGGCAGGAGAGAGAGGCTGGCCTACACAGGTGCCCGTCATGGAAGAGGCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635811.1
3UTR GCA 90 bp CGGCTCCAGACTCCTGAATGCCCCGGAAGTCTGACGGTTAACCTGTaGAGGCCCTGGTCAGGCCTGTGGTCCCCAAGGGCTGCCGGCAGC +
Preference number: 1 (lower is better)
Translates to: RLQTPECPGSLTVNL*RPWSGLWSPRAAGS
Trigger: GCTGCCGGCAGCCCTTGGGGACCACAGGCCTGACCAGGGCCTGCACAGGTTAACCGTCAGACTTCCGGGGCATTCAGGAGTCTGGAGCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635811.1
3UTR GCA 90 bp TGCTGTAATCTGCTCCTTCCGAGGGTGCCTTCCCACTGGCCGCCCTaGACAAACAGCCCCACTCTGGCTGCCACCCGCCCGGCTCCAGAC +
Preference number: 1 (lower is better)
Translates to: CCNLLLPRVPSHWPP*TNSPTLAATRPAPD
Trigger: GTCTGGAGCCGGGCGGGTGGCAGCCAGAGTGGGGCTGTTTGTGCAGGGCGGCCAGTGGGAAGGCACCCTCGGAAGGAGCAGATTACAGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635811.1
3UTR CCA 90 bp CTGGTCCCGCTGAGCTCGGGCACAGACCGGGCACCAGGCTCGGTGTaGAGTGTGATGGGGAGTGGTGTCCCCGGAGTTGTTTCTGGGAGT +
Preference number: 1 (lower is better)
Translates to: LVPLSSGTDRAPGSV*SVMGSGVPGVVSGS
Trigger: ACTCCCAGAAACAACTCCGGGGACACCACTCCCCATCACACTCCACACCGAGCCTGGTGCCCGGTCTGTGCCCGAGCTCAGCGGGACCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294309.8
3UTR GCA 90 bp AGGGCAGCCGCAAAGTCATCGAAGTTGTTGGCCCAGTACTCCAGCTaGTCGAAGCTCCCACAGGGCGCCGAGCCATTGGCAGGGGCCAGG +
Preference number: 1 (lower is better)
Translates to: RAAAKSSKLLAQYSS*SKLPQGAEPLAGAR
Trigger: CCTGGCCCCTGCCAATGGCTCGGCGCCCTGTGGGAGCTTCGAGCAGCTGGAGTACTGGGCCAACAACTTCGATGACTTTGCGGCTGCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635811.1
3UTR CCA 90 bp GGGCACAGACCGGGCACCAGGCTCGGTGTGGAGTGTGATGGGGAGTaGTGTCCCCGGAGTTGTTTCTGGGAGTTGCTGGGTCCACCTTAC +
Preference number: 1 (lower is better)
Translates to: GHRPGTRLGVECDGE*CPRSCFWELLGPPY
Trigger: GTAAGGTGGACCCAGCAACTCCCAGAAACAACTCCGGGGACACCACTCCCCATCACACTCCACACCGAGCCTGGTGCCCGGTCTGTGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294309.8
3UTR CCA 90 bp CCCAGCTTAGTGGTCCGTCAGAGGAAAGGTCTCTTCCTGCCTGGCTaGCCACAGCATGGCCGCCTCTTCCATGACGGGCACCTGTGTAGG +
Preference number: 1 (lower is better)
Translates to: PSLVVRQRKGLFLPG*PQHGRLFHDGHLCR
Trigger: CCTACACAGGTGCCCGTCATGGAAGAGGCGGCCATGCTGTGGCCAGCCAGGCAGGAAGAGACCTTTCCTCTGACGGACCACTAAGCTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294309.8
ENST00000542467.1
ENST00000635811.1
3UTR CCA 90 bp AATGTTCTTTGCTGTAATCTGCTCCTTCCGAGGGTGCCTTCCCACTaGCCGCCCTGCACAAACAGCCCCACTCTGGCTGCCACCCGCCCG +
Preference number: 1 (lower is better)
Translates to: NVLCCNLLLPRVPSH*PPCTNSPTLAATRP
Trigger: CGGGCGGGTGGCAGCCAGAGTGGGGCTGTTTGTGCAGGGCGGCCAGTGGGAAGGCACCCTCGGAAGGAGCAGATTACAGCAAAGAACATT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635811.1
3UTR CCA 90 bp GGAGGGCACGGCGCCTCCCTGAAGCACCAGCAGCTGTTCTGTAGATaGTTGTTGGGCCACACGCAAAGGACTTGGTTCCTGTCCCCAGCT +
Preference number: 1 (lower is better)
Translates to: GGHGASLKHQQLFCR*LLGHTQRTWFLSPA
Trigger: AGCTGGGGACAGGAACCAAGTCCTTTGCGTGTGGCCCAACAACCATCTACAGAACAGCTGCTGGTGCTTCAGGGAGGCGCCGTGCCCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294309.8
ENST00000542467.1
ENST00000635811.1
3UTR TCA 90 bp AAGCCCAGGGAGACGGAGCCACCGTCCAGGCGGATTAAGTCGCCATaGCCACAAAGCCACGTGCGACTCACTCCTGACATGAATGCGGGT +
Preference number: 1 (lower is better)
Translates to: KPRETEPPSRRIKSP*PQSHVRLTPDMNAG
Trigger: ACCCGCATTCATGTCAGGAGTGAGTCGCACGTGGCTTTGTGGTCATGGCGACTTAATCCGCCTGGACGGTGGCTCCGTCTCCCTGGGCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294309.8
3UTR TCA 90 bp TTAAGTCGCCATGACCACAAAGCCACGTGCGACTCACTCCTGACATaGATGCGGGTTGGACGCCGTCCCAAAGCACAGAGGGTGCAGGGC +
Preference number: 1 (lower is better)
Translates to: LSRHDHKATCDSLLT*MRVGRRPKAQRVQG
Trigger: GCCCTGCACCCTCTGTGCTTTGGGACGGCGTCCAACCCGCATTCATGTCAGGAGTGAGTCGCACGTGGCTTTGTGGTCATGGCGACTTAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294309.8
3UTR TCA 90 bp GGGCTTCAGACACAGCAGAGTCAGGAGGACTCCTGTCCTTTGACCTaGGGCCAAGAGCCTGCTCTGACCCCTTGTCACCCTTCCCAACTG +
Preference number: 1 (lower is better)
Translates to: GLQTQQSQEDSCPLT*GQEPALTPCHPSQL
Trigger: CAGTTGGGAAGGGTGACAAGGGGTCAGAGCAGGCTCTTGGCCTCAGGTCAAAGGACAGGAGTCCTCCTGACTCTGCTGTGTCTGAAGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000635811.1
ENST00000637342.1
ENST00000637504.1
3UTR GCA 90 bp GCTGGGTGGATAATGTTCTTTGCTGTAATCTGCTCCTTCCGAGGGTaGCTTCCCACTGGCCGCCCTGCACAAACAGCCCCACTCTGGCTG +
Preference number: 1 (lower is better)
Translates to: AGWIMFFAVICSFRG*LPTGRPAQTAPLWL
Trigger: CAGCCAGAGTGGGGCTGTTTGTGCAGGGCGGCCAGTGGGAAGGCACCCTCGGAAGGAGCAGATTACAGCAAAGAACATTATCCACCCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635811.1
3UTR GCA 90 bp CTTCTAGCTGTGCCTCCTCCTGGGTGCTGGGTGGATAATGTTCTTTaGTGTAATCTGCTCCTTCCGAGGGTGCCTTCCCACTGGCCGCCC +
Preference number: 1 (lower is better)
Translates to: LLAVPPPGCWVDNVL*CNLLLPRVPSHWPP
Trigger: GGGCGGCCAGTGGGAAGGCACCCTCGGAAGGAGCAGATTACAGCAAAGAACATTATCCACCCAGCACCCAGGAGGAGGCACAGCTAGAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635811.1
3UTR GCA 90 bp GCAGAGTCAGGAGGACTCCTGTCCTTTGACCTGAGGCCAAGAGCCTaGTCTGACCCCTTGTCACCCTTCCCAACTGTGCCCAGGTCAGAA +
Preference number: 1 (lower is better)
Translates to: AESGGLLSFDLRPRA*SDPLSPFPTVPRSE
Trigger: TTCTGACCTGGGCACAGTTGGGAAGGGTGACAAGGGGTCAGAGCAGGCTCTTGGCCTCAGGTCAAAGGACAGGAGTCCTCCTGACTCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000635811.1
ENST00000637342.1
ENST00000637504.1
3UTR CCA 90 bp TCTGTCCACCACCGTCAGGAGCATCGTGAGGAGTTGATGCTGTTCTaGGGACTCCACGTGAGAGCCTCCTGGGTCACTGCTGTTTCCAGG +
Preference number: 1 (lower is better)
Translates to: SVHHRQEHREELMLF*GLHVRASWVTAVSR
Trigger: CCTGGAAACAGCAGTGACCCAGGAGGCTCTCACGTGGAGTCCCCAGAACAGCATCAACTCCTCACGATGCTCCTGACGGTGGTGGACAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637504.1
3UTR TCA 90 bp TGGGACCACCTACTGAGTACCGGGTGCTGTGGACGGGGATGTATGTaGCTCACAACTTCATCGGGGCATGGAGAGTCTGTCCACCACCGT +
Preference number: 1 (lower is better)
Translates to: WDHLLSTGCCGRGCM*LTTSSGHGESVHHR
Trigger: ACGGTGGTGGACAGACTCTCCATGCCCCGATGAAGTTGTGAGTCACATACATCCCCGTCCACAGCACCCGGTACTCAGTAGGTGGTCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000635811.1
ENST00000637504.1
3UTR GCA 90 bp CTGAAGGAAAAGCAGATGAAAGAACTTGTGCCTCCCAGGCGAGAATaGACAGTGCAGGGGCAACCCTGGCAGGGCCCATCCCTTCCTGGT +
Preference number: 1 (lower is better)
Translates to: LKEKQMKELVPPRRE*TVQGQPWQGPSLPG
Trigger: ACCAGGAAGGGATGGGCCCTGCCAGGGTTGCCCCTGCACTGTGCATTCTCGCCTGGGAGGCACAAGTTCTTTCATCTGCTTTTCCTTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294309.8
3UTR GCA 90 bp TGCCTCCTCCTGGGTGCTGGGTGGATAATGTTCTTTGCTGTAATCTaGTCCTTCCGAGGGTGCCTTCCCACTGGCCGCCCTGCACAAACA +
Preference number: 1 (lower is better)
Translates to: CLLLGAGWIMFFAVI*SFRGCLPTGRPAQT
Trigger: TGTTTGTGCAGGGCGGCCAGTGGGAAGGCACCCTCGGAAGGAGCAGATTACAGCAAAGAACATTATCCACCCAGCACCCAGGAGGAGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635811.1
3UTR TCA 90 bp GAAGTGAGAAAACCATTGGTCAATCTGGACCTGGCGTGCTTCAGGTaGCAACAAGGCTTTCCACACACTGCTCGCTCGCCCCACCTCCCC +
Preference number: 1 (lower is better)
Translates to: EVRKPLVNLDLACFR*QQGFPHTARSPHLP
Trigger: GGGGAGGTGGGGCGAGCGAGCAGTGTGTGGAAAGCCTTGTTGTCACCTGAAGCACGCCAGGTCCAGATTGACCAATGGTTTTCTCACTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294309.8
3UTR GCA 90 bp AGTAAGAGCCCGCCACGGACTAGACATGTTGGGCTACACGGGCCCTaGACCAGGGCAGTCATCATCTTTACCAGCACAAAAACTCCCTCG +
Preference number: 1 (lower is better)
Translates to: SKSPPRTRHVGLHGP*TRAVIIFTSTKTPS
Trigger: CGAGGGAGTTTTTGTGCTGGTAAAGATGATGACTGCCCTGGTGCAGGGCCCGTGTAGCCCAACATGTCTAGTCCGTGGCGGGCTCTTACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000635811.1
ENST00000637342.1
ENST00000637504.1
3UTR CCA 90 bp TCTGTCCACCACCGTCAGGAGCATCGTGAGGAGTTGATGCTGTTCTaGGGACTCCACGTGAGAGCCTCCTGGGTCAATATTCATAGGGCA +
Preference number: 1 (lower is better)
Translates to: SVHHRQEHREELMLF*GLHVRASWVNIHRA
Trigger: TGCCCTATGAATATTGACCCAGGAGGCTCTCACGTGGAGTCCCCAGAACAGCATCAACTCCTCACGATGCTCCTGACGGTGGTGGACAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635811.1
3UTR GCA 90 bp TGGAGTGTGATGGGGAGTGGTGTCCCCGGAGTTGTTTCTGGGAGTTaGTGGGTCCACCTTACCTTAAATGTAGTCAACCAAGTCCCATCC +
Preference number: 1 (lower is better)
Translates to: WSVMGSGVPGVVSGS*WVHLTLNVVNQVPS
Trigger: GGATGGGACTTGGTTGACTACATTTAAGGTAAGGTGGACCCAGCAACTCCCAGAAACAACTCCGGGGACACCACTCCCCATCACACTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294309.8
3UTR CCA 90 bp CTCGGTGTGGAGTGTGATGGGGAGTGGTGTCCCCGGAGTTGTTTCTaGGAGTTGCTGGGTCCACCTTACCTTAAATGTAGTCAACCAAGT +
Preference number: 1 (lower is better)
Translates to: LGVECDGEWCPRSCF*ELLGPPYLKCSQPS
Trigger: ACTTGGTTGACTACATTTAAGGTAAGGTGGACCCAGCAACTCCCAGAAACAACTCCGGGGACACCACTCCCCATCACACTCCACACCGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294309.8
3UTR CCA 90 bp GCAGACCCAGAACCTACCACAAGGAAACGTCACATGAACACAACCTaGGAGCCATGGGCTTATCTCCAGAAGTGCCAAGGTCGTCTAAGC +
Preference number: 1 (lower is better)
Translates to: ADPEPTTRKRHMNTT*EPWAYLQKCQGRLS
Trigger: GCTTAGACGACCTTGGCACTTCTGGAGATAAGCCCATGGCTCCCAGGTTGTGTTCATGTGACGTTTCCTTGTGGTAGGTTCTGGGTCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294309.8
3UTR CCA 90 bp GTGCCACAAACATTTATGGGACCACCTACTGAGTACCGGGTGCTGTaGACGGGGATGTATGTGACTCACAACTTCATCGGGGCATGGAGA +
Preference number: 1 (lower is better)
Translates to: VPQTFMGPPTEYRVL*TGMYVTHNFIGAWR
Trigger: TCTCCATGCCCCGATGAAGTTGTGAGTCACATACATCCCCGTCCACAGCACCCGGTACTCAGTAGGTGGTCCCATAAATGTTTGTGGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000635811.1
ENST00000637504.1
3UTR TCA 90 bp TTTTTGTCTGAAAGGTCCCTGTGGAGTCGACGAGGGAATTCTCACTaGAGCAGCTATAAAAGAAAGCGGAGGGCACGGCGCCTCCCTGAA +
Preference number: 1 (lower is better)
Translates to: FLSERSLWSRRGNSH*SSYKRKRRARRLPE
Trigger: TTCAGGGAGGCGCCGTGCCCTCCGCTTTCTTTTATAGCTGCTTCAGTGAGAATTCCCTCGTCGACTCCACAGGGACCTTTCAGACAAAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294309.8
ENST00000635811.1
3UTR TCA 90 bp GTAAAGGCCCTGACAGTGACAACTTCCATTTGGAAAGCTGTTTGCTaGAGGTTTTGGCAGCAGGGCGTCCACACAAGAGGGGTACACAGT +
Preference number: 1 (lower is better)
Translates to: VKALTVTTSIWKAVC*RFWQQGVHTRGVHS
Trigger: ACTGTGTACCCCTCTTGTGTGGACGCCCTGCTGCCAAAACCTTCAGCAAACAGCTTTCCAAATGGAAGTTGTCACTGTCAGGGCCTTTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294309.8
3UTR TCA 90 bp TCCATCGCCGCAAACATGTATCTCTTCTTTACGTTGGGAACATTCTaGTTCTTCTCTTCTAGCTGTGCCTCCTCCTGGGTGCTGGGTGGA +
Preference number: 1 (lower is better)
Translates to: SIAANMYLFFTLGTF*FFSSSCASSWVLGG
Trigger: TCCACCCAGCACCCAGGAGGAGGCACAGCTAGAAGAGAAGAATCAGAATGTTCCCAACGTAAAGAAGAGATACATGTTTGCGGCGATGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635811.1
3UTR CCA 90 bp GAAAACAAAGGGTCAAGCACTGCTTTTTCTGCATTGCATTCACTGTaGGCTTCAGACACAGCAGAGTCAGGAGGACTCCTGTCCTTTGAC +
Preference number: 1 (lower is better)
Translates to: ENKGSSTAFSALHSL*ASDTAESGGLLSFD
Trigger: GTCAAAGGACAGGAGTCCTCCTGACTCTGCTGTGTCTGAAGCCCACAGTGAATGCAATGCAGAAAAAGCAGTGCTTGACCCTTTGTTTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000635811.1
ENST00000637342.1
ENST00000637504.1
3UTR CCA 90 bp ACTCCTGACATGTGGGGATCATTACAATTCAAGGCAAGATTTGGGTaGGGACACAGCCCAATCATATCAGGGATCCTAACCCCGGAGAAA +
Preference number: 1 (lower is better)
Translates to: TPDMWGSLQFKARFG*GHSPIISGILTPEK
Trigger: TTTCTCCGGGGTTAGGATCCCTGATATGATTGGGCTGTGTCCCCACCCAAATCTTGCCTTGAATTGTAATGATCCCCACATGTCAGGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000635811.1
ENST00000637342.1
ENST00000637504.1
3UTR CCA 90 bp AGGAAGGAAGGAAAAAGTAAAGGCAGTTTGACAGGGATGGGATATTaGCATCGCTTCACACTACCTCCCCACTCATTCATTACAAAGGGG +
Preference number: 1 (lower is better)
Translates to: RKEGKSKGSLTGMGY*HRFTLPPHSFITKG
Trigger: CCCCTTTGTAATGAATGAGTGGGGAGGTAGTGTGAAGCGATGCCAATATCCCATCCCTGTCAAACTGCCTTTACTTTTTCCTTCCTTCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000294309.8
3UTR CCA 90 bp CGTGAGGAGTTGATGCTGTTCTGGGGACTCCACGTGAGAGCCTCCTaGGTCAATATTCATAGGGCACATGTGATATTTCAATACATGTAT +
Preference number: 1 (lower is better)
Translates to: REELMLFWGLHVRAS*VNIHRAHVIFQYMY
Trigger: ATACATGTATTGAAATATCACATGTGCCCTATGAATATTGACCCAGGAGGCTCTCACGTGGAGTCCCCAGAACAGCATCAACTCCTCACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635811.1
3UTR TCA 90 bp ATCAGAACCCTAAAGAAACACACCCAGTCACACTCATACAAGCCATaGAATAATAAAACACAGTCAAGGTTCTCTCCATGTCAAACCACC +
Preference number: 1 (lower is better)
Translates to: IRTLKKHTQSHSYKP*NNKTQSRFSPCQTT
Trigger: GGTGGTTTGACATGGAGAGAACCTTGACTGTGTTTTATTATTTCATGGCTTGTATGAGTGTGACTGGGTGTGTTTCTTTAGGGTTCTGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294309.8
3UTR TCA 90 bp TGTTATTGTTATTGTTATTATTCAACACGAGTAAAAAGAAACTCATaGCCTTCTCCTTGGACTCGCTCCTCTCCCCAATCTCGATACCGA +
Preference number: 1 (lower is better)
Translates to: CYCYCYYSTRVKRNS*PSPWTRSSPQSRYR
Trigger: TCGGTATCGAGATTGGGGAGAGGAGCGAGTCCAAGGAGAAGGTCATGAGTTTCTTTTTACTCGTGTTGAATAATAACAATAACAATAACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000294309.8
3UTR CCA 90 bp CGGTCCATTGGGTTTTGTTATAATTTACAATTTCCACTAGATGGATaGTTCCAAGTTCATTCACTTGTGCCACAAACATTTATGGGACCA +
Preference number: 1 (lower is better)
Translates to: RSIGFCYNLQFPLDG*FQVHSLVPQTFMGP
Trigger: TGGTCCCATAAATGTTTGTGGCACAAGTGAATGAACTTGGAACCATCCATCTAGTGGAAATTGTAAATTATAACAAAACCCAATGGACCG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000635811.1
ENST00000637342.1
ENST00000637504.1
3UTR-3UTR GCA 90 bp CCTGGCTGGCCACAGCATGGCCGCCTCTTCCATGACGGGCACCTGTGTAGGCCACTCTCCTGCCGCCCCTaGTGGGACGGCAGCCCGGAC +
Preference number: 2 (lower is better)
Translates to: PGWPQHGRLFHDGHLCRPLSCRP*WDGSPD
Trigger: GTCCGGGCTGCCGTCCCAGCAGGGGCGGCAGGAGAG...TGGCCTACACAGGTGCCCGTCATGGAAGAGGCGGCCATGCTGTGGCCAGCCAGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294309.8
ENST00000542467.1
ENST00000635811.1
3UTR-3UTR GCA 90 bp CTCTTCCTGCCTGGCTGGCCACAGCATGGCCGCCTCTTCCATGACGGGCACCTGCCAGCCTCTCTCTCCTaGCGCCCCTGCTGGGACGGC +
Preference number: 2 (lower is better)
Translates to: LFLPGWPQHGRLFHDGHLPASLS*RPCWDG
Trigger: GCCGTCCCAGCAGGGGCGGCAGGAGAGAGAGGCTGG...CAGGTGCCCGTCATGGAAGAGGCGGCCATGCTGTGGCCAGCCAGGCAGGAAGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294309.8
ENST00000542467.1
ENST00000635811.1
3UTR-3UTR GCA 90 bp CAAACAGCCCCACTCTGGCTGCCACCCGCCCGGCTCCAGACTCCTGAATGCCCCAGGCACCACGGAAGCTaGAGGGGACAGGGGAGGCCG +
Preference number: 2 (lower is better)
Translates to: QTAPLWLPPARLQTPECPRHHGS*RGQGRP
Trigger: CGGCCTCCCCTGTCCCCTGCAGCTTCCGTGGTGCCT...GGGGCATTCAGGAGTCTGGAGCCGGGCGGGTGGCAGCCAGAGTGGGGCTGTTTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000635811.1
3UTR-3UTR TCA 90 bp AGCCCGCCACGGACTAGACATGTTGGGCTACACGGGCCCTGCACCAGGGCAGTCGGCACGGCGCCTCCCTaGAGCACCAGCAGCTGTTCT +
Preference number: 2 (lower is better)
Translates to: SPPRTRHVGLHGPCTRAVGTAPP*STSSCS
Trigger: AGAACAGCTGCTGGTGCTTCAGGGAGGCGCCGTGCC...GACTGCCCTGGTGCAGGGCCCGTGTAGCCCAACATGTCTAGTCCGTGGCGGGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635811.1
3UTR-3UTR GCA 90 bp GGCAGTGGAGAAGCTGACCAGGGCCACCTTCACCAAGCAACAAGAGAGAACACCCTCTCCTGCCGCCCCTaGTGGGACGGCAGCCCGGAC +
Preference number: 2 (lower is better)
Translates to: GSGEADQGHLHQATRENTLSCRP*WDGSPD
Trigger: GTCCGGGCTGCCGTCCCAGCAGGGGCGGCAGGAGAG...GGTGTTCTCTCTTGTTGCTTGGTGAAGGTGGCCCTGGTCAGCTTCTCCACTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294309.8
3UTR-3UTR GCA 90 bp GAGCTCCCGGGTGCAGCAATCTGCAACAGCCAGGAGCACGCCTCGCACCCACATGCATTGGGCAGCCCCTaGCAGGAGGCAGTGTCCATC +
Preference number: 2 (lower is better)
Translates to: ELPGAAICNSQEHASHPHALGSP*QEAVSI
Trigger: GATGGACACTGCCTCCTGGCAGGGGCTGCCCAATGC...ATGTGGGTGCGAGGCGTGCTCCTGGCTGTTGCAGATTGCTGCACCCGGGAGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294309.8
3UTR-3UTR CCA 90 bp GAAAGCGGAGGGCACGGCGCCTCCCTGAAGCACCAGCAGCTGTTCTGTAGATGGCTCTTCCTGCCTGGCTaGCCACAGCATGGCCGCCTC +
Preference number: 2 (lower is better)
Translates to: ESGGHGASLKHQQLFCRWLFLPG*PQHGRL
Trigger: GAGGCGGCCATGCTGTGGCCAGCCAGGCAGGAAGAG...CCATCTACAGAACAGCTGCTGGTGCTTCAGGGAGGCGCCGTGCCCTCCGCTTTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294309.8
ENST00000542467.1
ENST00000635811.1
3UTR-3UTR CCA 90 bp GAGCTCCCGGGTGCAGCAATCTGCAACAGCCAGGAGCACGCCTCGCACCCACATAACCTGTGCAGGCCCTaGTCAGGCCTGTGGTCCCCA +
Preference number: 2 (lower is better)
Translates to: ELPGAAICNSQEHASHPHNLCRP*SGLWSP
Trigger: TGGGGACCACAGGCCTGACCAGGGCCTGCACAGGTT...ATGTGGGTGCGAGGCGTGCTCCTGGCTGTTGCAGATTGCTGCACCCGGGAGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294309.8
3UTR-3UTR TCA 90 bp TCCTGGAGGCCCCTCATCCCCAGTAAGAGCCCGCCACGGACTAGACATGTTGGGTCTGGGGACTCCACGTaGGAGCCTCCTGGGTCACTG +
Preference number: 2 (lower is better)
Translates to: SWRPLIPSKSPPRTRHVGSGDST*EPPGSL
Trigger: CAGTGACCCAGGAGGCTCTCACGTGGAGTCCCCAGA...CCCAACATGTCTAGTCCGTGGCGGGCTCTTACTGGGGATGAGGGGCCTCCAGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000637504.1
3UTR-3UTR GCA 90 bp GAAAGCGGAGGGCACGGCGCCTCCCTGAAGCACCAGCAGCTGTTCTGTAGATGGGCCCAGTACTCCAGCTaGTCGAAGCTCCCACAGGGC +
Preference number: 2 (lower is better)
Translates to: ESGGHGASLKHQQLFCRWAQYSS*SKLPQG
Trigger: GCCCTGTGGGAGCTTCGAGCAGCTGGAGTACTGGGC...CCATCTACAGAACAGCTGCTGGTGCTTCAGGGAGGCGCCGTGCCCTCCGCTTTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635811.1
3UTR-3UTR TCA 90 bp CTAAGAGCTCCCGGGTGCAGCAATCTGCAACAGCCAGGAGCACGCCTCGCACCCAATGCCCCGGAAGTCTaGCGGTTAACCTGTGCAGGC +
Preference number: 2 (lower is better)
Translates to: LRAPGCSNLQQPGARLAPNAPEV*RLTCAG
Trigger: GCCTGCACAGGTTAACCGTCAGACTTCCGGGGCATT...GGGTGCGAGGCGTGCTCCTGGCTGTTGCAGATTGCTGCACCCGGGAGCTCTTAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294309.8
3UTR-3UTR TCA 90 bp CCAATCTCGATACCGACTGCACTGTTGTTCGGGTCGCCCCCTCCCCCACCATCCACCAGCATCCCCACCTaGATGCCCCGGAAGTCTGAC +
Preference number: 2 (lower is better)
Translates to: PISIPTALLFGSPPPPPSTSIPT*MPRKSD
Trigger: GTCAGACTTCCGGGGCATTCAGGTGGGGATGCTGGT...GGATGGTGGGGGAGGGGGCGACCCGAACAACAGTGCAGTCGGTATCGAGATTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000294309.8
3UTR-3UTR TCA 90 bp AGAGCCCGCCACGGACTAGACATGTTGGGCTACACGGGCCCTGCACCAGGGCAGAGCATCGTGAGGAGTTaGTGCTGTTCTGGGGACTCC +
Preference number: 2 (lower is better)
Translates to: RARHGLDMLGYTGPAPGQSIVRS*CCSGDS
Trigger: GGAGTCCCCAGAACAGCATCAACTCCTCACGATGCT...CTGCCCTGGTGCAGGGCCCGTGTAGCCCAACATGTCTAGTCCGTGGCGGGCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635811.1
ENST00000637504.1
3UTR CAA 90 bp GGAGGCCCCTCATCCCCAGTAAGAGCCCGCCACGGACTAGACATGTaGGGCTACACGGGCCCTGCACCAGGGCAGTCATCATCTTTACCA +
Preference number: 2 (lower is better)
Translates to: GGPSSPVRARHGLDM*GYTGPAPGQSSSLP
Trigger: TGGTAAAGATGATGACTGCCCTGGTGCAGGGCCCGTGTAGCCCAACATGTCTAGTCCGTGGCGGGCTCTTACTGGGGATGAGGGGCCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000635811.1
ENST00000637342.1
ENST00000637504.1
3UTR-3UTR CCA 90 bp CAAACAGCCCCACTCTGGCTGCCACCCGCCCGGCTCCAGACTCCTGAATGCCCCCAGCTGTTCTGTAGATaGTTGTTGGGCCACACGCAA +
Preference number: 2 (lower is better)
Translates to: QTAPLWLPPARLQTPECPQLFCR*LLGHTQ
Trigger: TTGCGTGTGGCCCAACAACCATCTACAGAACAGCTG...GGGGCATTCAGGAGTCTGGAGCCGGGCGGGTGGCAGCCAGAGTGGGGCTGTTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000635811.1
3UTR CAA 90 bp GGGCATGGAGAGTCTGTCCACCACCGTCAGGAGCATCGTGAGGAGTaGATGCTGTTCTGGGGACTCCACGTGAGAGCCTCCTGGGTCACT +
Preference number: 2 (lower is better)
Translates to: GHGESVHHRQEHREE*MLFWGLHVRASWVT
Trigger: AGTGACCCAGGAGGCTCTCACGTGGAGTCCCCAGAACAGCATCAACTCCTCACGATGCTCCTGACGGTGGTGGACAGACTCTCCATGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637504.1
3UTR-3UTR GCA 90 bp ACTAGACATGTTGGGCTACACGGGCCCTGCACCAGGGCAGTCATCATCTTTACCGTGGTCCCCAAGGGCTaGCGGCAGCAAAGGCACCAC +
Preference number: 2 (lower is better)
Translates to: TRHVGLHGPCTRAVIIFTVVPKG*RQQRHH
Trigger: GTGGTGCCTTTGCTGCCGGCAGCCCTTGGGGACCAC...GGTAAAGATGATGACTGCCCTGGTGCAGGGCCCGTGTAGCCCAACATGTCTAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635811.1
3UTR-3UTR GCA 90 bp CACGGACTAGACATGTTGGGCTACACGGGCCCTGCACCAGGGCAGTCATCATCTTGGCAGGGGCCAGGCTaGTGTTTCCAGGAAGAGCCA +
Preference number: 2 (lower is better)
Translates to: HGLDMLGYTGPAPGQSSSWQGPG*CFQEEP
Trigger: TGGCTCTTCCTGGAAACAGCAGCCTGGCCCCTGCCA...AGATGATGACTGCCCTGGTGCAGGGCCCGTGTAGCCCAACATGTCTAGTCCGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635811.1
3UTR CAA 90 bp GGGCATGGAGAGTCTGTCCACCACCGTCAGGAGCATCGTGAGGAGTaGATGCTGTTCTGGGGACTCCACGTGAGAGCCTCCTGGGTCAAT +
Preference number: 2 (lower is better)
Translates to: GHGESVHHRQEHREE*MLFWGLHVRASWVN
Trigger: ATTGACCCAGGAGGCTCTCACGTGGAGTCCCCAGAACAGCATCAACTCCTCACGATGCTCCTGACGGTGGTGGACAGACTCTCCATGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635811.1
3UTR-3UTR TCA 90 bp AGCCCGCCACGGACTAGACATGTTGGGCTACACGGGCCCTGCACCAGGGCAGTCTCTTGCATTTTTGTCTaGAAGGTCCCTGTGGAGTCG +
Preference number: 2 (lower is better)
Translates to: SPPRTRHVGLHGPCTRAVSCIFV*KVPVES
Trigger: CGACTCCACAGGGACCTTTCAGACAAAAATGCAAGA...GACTGCCCTGGTGCAGGGCCCGTGTAGCCCAACATGTCTAGTCCGTGGCGGGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635811.1
3UTR-3UTR GCA 90 bp ACTAGACATGTTGGGCTACACGGGCCCTGCACCAGGGCAGTCATCATCTTTACCAGCCACAGGTGCGGGTaGTGGCTCAGCCTCTCTGTG +
Preference number: 2 (lower is better)
Translates to: TRHVGLHGPCTRAVIIFTSHRCG*WLSLSV
Trigger: CACAGAGAGGCTGAGCCAGCACCCGCACCTGTGGCT...GGTAAAGATGATGACTGCCCTGGTGCAGGGCCCGTGTAGCCCAACATGTCTAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635811.1
3UTR-3UTR GCA 90 bp AGAGCCCGCCACGGACTAGACATGTTGGGCTACACGGGCCCTGCACCAGGGCAGTTCTTTGCTGTAATCTaGTCCTTCCGAGGGTGCCTT +
Preference number: 2 (lower is better)
Translates to: RARHGLDMLGYTGPAPGQFFAVI*SFRGCL
Trigger: AAGGCACCCTCGGAAGGAGCAGATTACAGCAAAGAA...CTGCCCTGGTGCAGGGCCCGTGTAGCCCAACATGTCTAGTCCGTGGCGGGCTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635811.1
3UTR-3UTR CCA 90 bp GAGCTCCCGGGTGCAGCAATCTGCAACAGCCAGGAGCACGCCTCGCACCCACATTCTGAAAGGTCCCTGTaGAGTCGACGAGGGAATTCT +
Preference number: 2 (lower is better)
Translates to: ELPGAAICNSQEHASHPHSERSL*SRRGNS
Trigger: AGAATTCCCTCGTCGACTCCACAGGGACCTTTCAGA...ATGTGGGTGCGAGGCGTGCTCCTGGCTGTTGCAGATTGCTGCACCCGGGAGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294309.8
3UTR-3UTR TCA 90 bp GGCAGTGGAGAAGCTGACCAGGGCCACCTTCACCAAGCAACAAGAGAGAACACCCGTGCGACTCACTCCTaGCATGAATGCGGGTTGGAC +
Preference number: 2 (lower is better)
Translates to: GSGEADQGHLHQATRENTRATHS*HECGLD
Trigger: GTCCAACCCGCATTCATGTCAGGAGTGAGTCGCACG...GGTGTTCTCTCTTGTTGCTTGGTGAAGGTGGCCCTGGTCAGCTTCTCCACTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294309.8
3UTR-3UTR GCA 90 bp ATGTGGGGATCATTACAATTCAAGGCAAGATTTGGGTGGGGACACAGCCCAATCCCAGCCTCTCTCTCCTaGCGCCCCTGCTGGGACGGC +
Preference number: 2 (lower is better)
Translates to: MWGSLQFKARFGWGHSPIPASLS*RPCWDG
Trigger: GCCGTCCCAGCAGGGGCGGCAGGAGAGAGAGGCTGG...GATTGGGCTGTGTCCCCACCCAAATCTTGCCTTGAATTGTAATGATCCCCACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000635811.1
3UTR-3UTR CCA 90 bp AAGGCAAAGGAGAAGCAAGACACATCTTCCATGGGGGCAGGCAAGAGAGAGCATCTCTTCCTGCCTGGCTaGCCACAGCATGGCCGCCTC +
Preference number: 2 (lower is better)
Translates to: KAKEKQDTSSMGAGKREHLFLPG*PQHGRL
Trigger: GAGGCGGCCATGCTGTGGCCAGCCAGGCAGGAAGAG...ATGCTCTCTCTTGCCTGCCCCCATGGAAGATGTGTCTTGCTTCTCCTTTGCCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635811.1
3UTR-3UTR CCA 90 bp ATGTGGGGATCATTACAATTCAAGGCAAGATTTGGGTGGGGACACAGCCCAATCCAGGCCTGCTCCTCCTaGAGGCCCCTCATCCCCAGT +
Preference number: 2 (lower is better)
Translates to: MWGSLQFKARFGWGHSPIQACSS*RPLIPS
Trigger: ACTGGGGATGAGGGGCCTCCAGGAGGAGCAGGCCTG...GATTGGGCTGTGTCCCCACCCAAATCTTGCCTTGAATTGTAATGATCCCCACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000635811.1
ENST00000637342.1
ENST00000637504.1
3UTR-3UTR GCA 90 bp ATCCCACAGGGGCTATGGCGTGGGCTCAGCACCTCTGAAGGAAAAGCAGATGAAGACAGGGGAGGCCGCTaGTTCTTGCATTTTTGTCTG +
Preference number: 2 (lower is better)
Translates to: IPQGLWRGLSTSEGKADEDRGGR*FLHFCL
Trigger: CAGACAAAAATGCAAGAAGCAGCGGCCTCCCCTGTC...TTCATCTGCTTTTCCTTCAGAGGTGCTGAGCCCACGCCATAGCCCCTGTGGGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000294309.8
3UTR-3UTR GCA 90 bp ATGTGGGGATCATTACAATTCAAGGCAAGATTTGGGTGGGGACACAGCCCAATCGGGCTACACGGGCCCTaGACCAGGGCAGTCATCATC +
Preference number: 2 (lower is better)
Translates to: MWGSLQFKARFGWGHSPIGLHGP*TRAVII
Trigger: GATGATGACTGCCCTGGTGCAGGGCCCGTGTAGCCC...GATTGGGCTGTGTCCCCACCCAAATCTTGCCTTGAATTGTAATGATCCCCACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000635811.1
ENST00000637342.1
ENST00000637504.1
3UTR CAA 90 bp GTGGAGTGTGATGGGGAGTGGTGTCCCCGGAGTTGTTTCTGGGAGTaGCTGGGTCCACCTTACCTTAAATGTAGTCAACCAAGTCCCATC +
Preference number: 2 (lower is better)
Translates to: VECDGEWCPRSCFWE*LGPPYLKCSQPSPI
Trigger: GATGGGACTTGGTTGACTACATTTAAGGTAAGGTGGACCCAGCAACTCCCAGAAACAACTCCGGGGACACCACTCCCCATCACACTCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294309.8
3UTR-3UTR TCA 90 bp GGCAGTGGAGAAGCTGACCAGGGCCACCTTCACCAAGCAACAAGAGAGAACACCTCTTGCATTTTTGTCTaGAAGGTCCCTGTGGAGTCG +
Preference number: 2 (lower is better)
Translates to: GSGEADQGHLHQATRENTSCIFV*KVPVES
Trigger: CGACTCCACAGGGACCTTTCAGACAAAAATGCAAGA...GGTGTTCTCTCTTGTTGCTTGGTGAAGGTGGCCCTGGTCAGCTTCTCCACTGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000294309.8
3UTR-3UTR GCA 90 bp AAGGCAAAGGAGAAGCAAGACACATCTTCCATGGGGGCAGGCAAGAGAGAGCATAGCCTCCTGGGTCACTaGTGTTTCCAGGAAGAGCCA +
Preference number: 2 (lower is better)
Translates to: KAKEKQDTSSMGAGKREHSLLGH*CFQEEP
Trigger: TGGCTCTTCCTGGAAACAGCAGTGACCCAGGAGGCT...ATGCTCTCTCTTGCCTGCCCCCATGGAAGATGTGTCTTGCTTCTCCTTTGCCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637504.1
3UTR CAA 90 bp CCTGACAGTGACAACTTCCATTTGGAAAGCTGTTTGCTGAAGGTTTaGGCAGCAGGGCGTCCACACAAGAGGGGTACACAGTGTGGGAGT +
Preference number: 2 (lower is better)
Translates to: PDSDNFHLESCLLKV*AAGRPHKRGTQCGS
Trigger: ACTCCCACACTGTGTACCCCTCTTGTGTGGACGCCCTGCTGCCAAAACCTTCAGCAAACAGCTTTCCAAATGGAAGTTGTCACTGTCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294309.8
3UTR-3UTR GCA 90 bp CTTTCACGGTCCATTGGGTTTTGTTATAATTTACAATTTCCACTAGATGGATGGCTCTCCTGCCGCCCCTaGTGGGACGGCAGCCCGGAC +
Preference number: 2 (lower is better)
Translates to: LSRSIGFCYNLQFPLDGWLSCRP*WDGSPD
Trigger: GTCCGGGCTGCCGTCCCAGCAGGGGCGGCAGGAGAG...CCATCCATCTAGTGGAAATTGTAAATTATAACAAAACCCAATGGACCGTGAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635811.1
3UTR-3UTR TCA 90 bp CTCACTGAAGCAGCTATAAAAGAAAGCGGAGGGCACGGCGCCTCCCTGAAGCACCGAGGGAATTCTCACTaGAGCAGCTATAAAAGAAAG +
Preference number: 2 (lower is better)
Translates to: LTEAAIKESGGHGASLKHRGNSH*SSYKRK
Trigger: CTTTCTTTTATAGCTGCTTCAGTGAGAATTCCCTCG...GTGCTTCAGGGAGGCGCCGTGCCCTCCGCTTTCTTTTATAGCTGCTTCAGTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294309.8
ENST00000635811.1
3UTR-3UTR CCA 90 bp AGGCAAAGGAGAAGCAAGACACATCTTCCATGGGGGCAGGCAAGAGAGAGCATGTCTGTAGATGGTTGTTaGGCCACACGCAAAGGACTT +
Preference number: 2 (lower is better)
Translates to: RQRRSKTHLPWGQARESMSVDGC*ATRKGL
Trigger: AAGTCCTTTGCGTGTGGCCCAACAACCATCTACAGA...CATGCTCTCTCTTGCCTGCCCCCATGGAAGATGTGTCTTGCTTCTCCTTTGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635811.1
3UTR-3UTR CCA 90 bp TTCATTCACTTGTGCCACAAACATTTATGGGACCACCTACTGAGTACCGGGTGCGAGTTGATGCTGTTCTaGGGACTCCACGTGAGAGCC +
Preference number: 2 (lower is better)
Translates to: FIHLCHKHLWDHLLSTGCELMLF*GLHVRA
Trigger: GGCTCTCACGTGGAGTCCCCAGAACAGCATCAACTC...GCACCCGGTACTCAGTAGGTGGTCCCATAAATGTTTGTGGCACAAGTGAATGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635811.1
ENST00000637504.1
3UTR CAA 90 bp GATTGTAAAGGCCCTGACAGTGACAACTTCCATTTGGAAAGCTGTTaGCTGAAGGTTTTGGCAGCAGGGCGTCCACACAAGAGGGGTACA +
Preference number: 2 (lower is better)
Translates to: DCKGPDSDNFHLESC*LKVLAAGRPHKRGT
Trigger: TGTACCCCTCTTGTGTGGACGCCCTGCTGCCAAAACCTTCAGCAAACAGCTTTCCAAATGGAAGTTGTCACTGTCAGGGCCTTTACAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294309.8
3UTR-3UTR CCA 90 bp ATGAGGCAGGACCCTCAGCAGCATGTAGATTTTGCTGTTGCTGATTGTAAAGGCACAACCTGGGAGCCATaGGCTTATCTCCAGAAGTGC +
Preference number: 2 (lower is better)
Translates to: MRQDPQQHVDFAVADCKGTTWEP*AYLQKC
Trigger: GCACTTCTGGAGATAAGCCCATGGCTCCCAGGTTGT...GCCTTTACAATCAGCAACAGCAAAATCTACATGCTGCTGAGGGTCCTGCCTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294309.8
3UTR CAA 90 bp TTTGCTGTTGCTGATTGTAAAGGCCCTGACAGTGACAACTTCCATTaGGAAAGCTGTTTGCTGAAGGTTTTGGCAGCAGGGCGTCCACAC +
Preference number: 2 (lower is better)
Translates to: FAVADCKGPDSDNFH*ESCLLKVLAAGRPH
Trigger: GTGTGGACGCCCTGCTGCCAAAACCTTCAGCAAACAGCTTTCCAAATGGAAGTTGTCACTGTCAGGGCCTTTACAATCAGCAACAGCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294309.8
3UTR-3UTR GCA 90 bp ATGAGGCAGGACCCTCAGCAGCATGTAGATTTTGCTGTTGCTGATTGTAAAGGCGCAAAACAGAAAAGGTaGCCCTCACTGCAGGTAGAC +
Preference number: 2 (lower is better)
Translates to: MRQDPQQHVDFAVADCKGAKQKR*PSLQVD
Trigger: GTCTACCTGCAGTGAGGGGCACCTTTTCTGTTTTGC...GCCTTTACAATCAGCAACAGCAAAATCTACATGCTGCTGAGGGTCCTGCCTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000294309.8
3UTR-3UTR GCA 90 bp ATGAGGCAGGACCCTCAGCAGCATGTAGATTTTGCTGTTGCTGATTGTAAAGGCGCTTATCTCCAGAAGTaGCAAGGTCGTCTAAGCCCA +
Preference number: 2 (lower is better)
Translates to: MRQDPQQHVDFAVADCKGAYLQK*QGRLSP
Trigger: TGGGCTTAGACGACCTTGGCACTTCTGGAGATAAGC...GCCTTTACAATCAGCAACAGCAAAATCTACATGCTGCTGAGGGTCCTGCCTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294309.8
3UTR-3UTR TCA 90 bp TTAAGGAGAATGAGAACCATTCCCAGAAAGGGCCTTACAGCTATGGAAAGAGAGCGGCAACCACTCAAGTaGCTCAGAAGGAAGCTTCTC +
Preference number: 2 (lower is better)
Translates to: LRRMRTIPRKGLTAMERERQPLK*LRRKLL
Trigger: GAGAAGCTTCCTTCTGAGTCACTTGAGTGGTTGCCG...CTCTCTTTCCATAGCTGTAAGGCCCTTTCTGGGAATGGTTCTCATTCTCCTTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294309.8
3UTR-3UTR TCA 90 bp CTCCATTCAAAAGAACAGGTCTTCTTAGAGCTGCAGCTCACTCCAATAAATGAAGACTCACTCCTGACATaGATGCGGGTTGGACGCCGT +
Preference number: 2 (lower is better)
Translates to: LHSKEQVFLELQLTPINEDSLLT*MRVGRR
Trigger: ACGGCGTCCAACCCGCATTCATGTCAGGAGTGAGTC...TTCATTTATTGGAGTGAGCTGCAGCTCTAAGAAGACCTGTTCTTTTGAATGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294309.8
3UTR-3UTR CCA 90 bp TTAAGGAGAATGAGAACCATTCCCAGAAAGGGCCTTACAGCTATGGAAAGAGAGCATCCCACCACTAGATaGCACCCAAACCTCAGCAGA +
Preference number: 2 (lower is better)
Translates to: LRRMRTIPRKGLTAMEREHPTTR*HPNLSR
Trigger: TCTGCTGAGGTTTGGGTGCCATCTAGTGGTGGGATG...CTCTCTTTCCATAGCTGTAAGGCCCTTTCTGGGAATGGTTCTCATTCTCCTTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294309.8
3UTR-3UTR TCA 90 bp AAAACCATTGGTCAATCTGGACCTGGCGTGCTTCAGGTGACAACAAGGCTTTCCAGAACTGTGCTGAAGTaGAGAATGACAATCCCATTC +
Preference number: 2 (lower is better)
Translates to: KTIGQSGPGVLQVTTRLSRTVLK*RMTIPF
Trigger: GAATGGGATTGTCATTCTTCACTTCAGCACAGTTCT...GGAAAGCCTTGTTGTCACCTGAAGCACGCCAGGTCCAGATTGACCAATGGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294309.8
3UTR-3UTR CCA 90 bp TTAAGGAGAATGAGAACCATTCCCAGAAAGGGCCTTACAGCTATGGAAAGAGAGCGTACCCTGTGGTGCTaGGCTAAAATCGGAGGTATT +
Preference number: 2 (lower is better)
Translates to: LRRMRTIPRKGLTAMERERTLWC*AKIGGI
Trigger: AATACCTCCGATTTTAGCCCAGCACCACAGGGTACG...CTCTCTTTCCATAGCTGTAAGGCCCTTTCTGGGAATGGTTCTCATTCTCCTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294309.8
3UTR-3UTR TCA 90 bp ATGAGGCAGGACCCTCAGCAGCATGTAGATTTTGCTGTTGCTGATTGTAAAGGCGCTTATACATGCCTTTaGGCAAAACAGAAAAGGTGC +
Preference number: 2 (lower is better)
Translates to: MRQDPQQHVDFAVADCKGAYTCL*AKQKRC
Trigger: GCACCTTTTCTGTTTTGCTCAAAGGCATGTATAAGC...GCCTTTACAATCAGCAACAGCAAAATCTACATGCTGCTGAGGGTCCTGCCTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000294309.8
3UTR-3UTR GCA 90 bp CCATCCTGTGACACTCCTAGACGAAACGCAGACCCAGAACCTACCACAAGGAAAACTTTTCTCCAAGTTTaGGGTGGTTTCCATATTGTT +
Preference number: 2 (lower is better)
Translates to: PSCDTPRRNADPEPTTRKTFLQV*GGFHIV
Trigger: AACAATATGGAAACCACCGCAAACTTGGAGAAAAGT...TTTCCTTGTGGTAGGTTCTGGGTCTGCGTTTCGTCTAGGAGTGTCACAGGATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294309.8
3UTR-3UTR CCA 90 bp TTAAGGAGAATGAGAACCATTCCCAGAAAGGGCCTTACAGCTATGGAAAGAGAGTCTGTAGATGGTTGTTaGGCCACACGCAAAGGACTT +
Preference number: 2 (lower is better)
Translates to: LRRMRTIPRKGLTAMERESVDGC*ATRKGL
Trigger: AAGTCCTTTGCGTGTGGCCCAACAACCATCTACAGA...CTCTCTTTCCATAGCTGTAAGGCCCTTTCTGGGAATGGTTCTCATTCTCCTTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294309.8
3UTR CAA 90 bp TTGTTATTATTCAACACGAGTAAAAAGAAACTCATGACCTTCTCCTaGGACTCGCTCCTCTCCCCAATCTCGATACCGACTGCACTGTTG +
Preference number: 2 (lower is better)
Translates to: LLLFNTSKKKLMTFS*DSLLSPISIPTALL
Trigger: CAACAGTGCAGTCGGTATCGAGATTGGGGAGAGGAGCGAGTCCAAGGAGAAGGTCATGAGTTTCTTTTTACTCGTGTTGAATAATAACAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000294309.8
3UTR-3UTR CCA 90 bp GGGTCAAGCACTGCTTTTTCTGCATTGCATTCACTGTGGGCTTCAGACACAGCATTTCCACTAGATGGATaGTTCCAAGTTCATTCACTT +
Preference number: 2 (lower is better)
Translates to: GSSTAFSALHSLWASDTAFPLDG*FQVHSL
Trigger: AAGTGAATGAACTTGGAACCATCCATCTAGTGGAAA...TGCTGTGTCTGAAGCCCACAGTGAATGCAATGCAGAAAAAGCAGTGCTTGACCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000635811.1
ENST00000637342.1
ENST00000637504.1
3UTR GCA 72 bp CATGACGGGCACCTGTGTAGGCCAGCCTCTCTCTCCTaGCGCCCCTGCTGGGACGGCAGCCCGGACGTCACC +
Preference number: 3 (lower is better)
Translates to: HDGHLCRPASLS*RPCWDGSPDVT
Trigger: GGTGACGTCCGGGCTGCCGTCCCAGCAGGGGCGGCAGGAGAGAGAGGCTGGCCTACACAGGTGCCCGTCATG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635811.1
3UTR GCA 72 bp CCACTGGCCGCCCTGCACAAACAGCCCCACTCTGGCTaGCACCCGCCCGGCTCCAGACTCCTGAATGCCCCG +
Preference number: 3 (lower is better)
Translates to: PLAALHKQPHSG*HPPGSRLLNAP
Trigger: CGGGGCATTCAGGAGTCTGGAGCCGGGCGGGTGGCAGCCAGAGTGGGGCTGTTTGTGCAGGGCGGCCAGTGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635811.1
3UTR CCA 72 bp CCCGGACGTCACCTGCACAGCCACAGGTGCGGGTGCTaGCTCAGCCTCTCTGTGAGCTCATCCTCCCCGGGC +
Preference number: 3 (lower is better)
Translates to: PGRHLHSHRCGC*LSLSVSSSSPG
Trigger: GCCCGGGGAGGATGAGCTCACAGAGAGGCTGAGCCAGCACCCGCACCTGTGGCTGTGCAGGTGACGTCCGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635811.1
3UTR GCA 72 bp CAGCCCGGACGTCACCTGCACAGCCACAGGTGCGGGTaGTGGCTCAGCCTCTCTGTGAGCTCATCCTCCCCG +
Preference number: 3 (lower is better)
Translates to: QPGRHLHSHRCG*WLSLSVSSSSP
Trigger: CGGGGAGGATGAGCTCACAGAGAGGCTGAGCCAGCACCCGCACCTGTGGCTGTGCAGGTGACGTCCGGGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635811.1
3UTR CCA 72 bp GAACAGGAGCTCCACAGTCATCTGGTAGGTGGCCTCTaGGGTCCCAGCAAGGGGCTGCAGGTGGCTGCGGGG +
Preference number: 3 (lower is better)
Translates to: EQELHSHLVGGL*GPSKGLQVAAG
Trigger: CCCCGCAGCCACCTGCAGCCCCTTGCTGGGACCCCAGAGGCCACCTACCAGATGACTGTGGAGCTCCTGTTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635811.1
3UTR TCA 72 bp CGGGCACAGACCGGGCACCAGGCTCGGTGTGGAGTGTaGTGGGGAGTGGTGTCCCCGGAGTTGTTTCTGGGA +
Preference number: 3 (lower is better)
Translates to: RAQTGHQARCGV*WGVVSPELFLG
Trigger: TCCCAGAAACAACTCCGGGGACACCACTCCCCATCACACTCCACACCGAGCCTGGTGCCCGGTCTGTGCCCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294309.8
3UTR TCA 72 bp CCGCCCGGCTCCAGACTCCTGAATGCCCCGGAAGTCTaGCGGTTAACCTGTGCAGGCCCTGGTCAGGCCTGT +
Preference number: 3 (lower is better)
Translates to: PPGSRLLNAPEV*RLTCAGPGQAC
Trigger: ACAGGCCTGACCAGGGCCTGCACAGGTTAACCGTCAGACTTCCGGGGCATTCAGGAGTCTGGAGCCGGGCGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635811.1
3UTR GCA 72 bp GTCACCCTTCCCAACTGTGCCCAGGTCAGAAGTCTGTaGCCAGGCCTGCTCCTCCTGGAGGCCCCTCATCCC +
Preference number: 3 (lower is better)
Translates to: VTLPNCAQVRSL*PGLLLLEAPHP
Trigger: GGGATGAGGGGCCTCCAGGAGGAGCAGGCCTGGGCACAGACTTCTGACCTGGGCACAGTTGGGAAGGGTGAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000635811.1
ENST00000637342.1
ENST00000637504.1
3UTR CCA 72 bp GTGGTCCGTCAGAGGAAAGGTCTCTTCCTGCCTGGCTaGCCACAGCATGGCCGCCTCTTCCATGACGGGCAC +
Preference number: 3 (lower is better)
Translates to: VVRQRKGLFLPG*PQHGRLFHDGH
Trigger: GTGCCCGTCATGGAAGAGGCGGCCATGCTGTGGCCAGCCAGGCAGGAAGAGACCTTTCCTCTGACGGACCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294309.8
ENST00000542467.1
ENST00000635811.1
3UTR CCA 72 bp CCGGGCACCAGGCTCGGTGTGGAGTGTGATGGGGAGTaGTGTCCCCGGAGTTGTTTCTGGGAGTTGCTGGGT +
Preference number: 3 (lower is better)
Translates to: PGTRLGVECDGE*CPRSCFWELLG
Trigger: ACCCAGCAACTCCCAGAAACAACTCCGGGGACACCACTCCCCATCACACTCCACACCGAGCCTGGTGCCCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294309.8
3UTR CCA 72 bp TGCTGTAATCTGCTCCTTCCGAGGGTGCCTTCCCACTaGCCGCCCTGCACAAACAGCCCCACTCTGGCTGCC +
Preference number: 3 (lower is better)
Translates to: CCNLLLPRVPSH*PPCTNSPTLAA
Trigger: GGCAGCCAGAGTGGGGCTGTTTGTGCAGGGCGGCCAGTGGGAAGGCACCCTCGGAAGGAGCAGATTACAGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635811.1
3UTR CCA 72 bp AGCCACGTGCGACTCACTCCTGACATGAATGCGGGTTaGACGCCGTCCCAAAGCACAGAGGGTGCAGGGCCA +
Preference number: 3 (lower is better)
Translates to: SHVRLTPDMNAG*TPSQSTEGAGP
Trigger: TGGCCCTGCACCCTCTGTGCTTTGGGACGGCGTCCAACCCGCATTCATGTCAGGAGTGAGTCGCACGTGGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294309.8
3UTR CCA 72 bp GGCAGCAGGGCGTCCACACAAGAGGGGTACACAGTGTaGGAGTCAAAGCCCCAGTCGGATGAGCAGGGCATC +
Preference number: 3 (lower is better)
Translates to: GSRASTQEGYTV*ESKPQSDEQGI
Trigger: GATGCCCTGCTCATCCGACTGGGGCTTTGACTCCCACACTGTGTACCCCTCTTGTGTGGACGCCCTGCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294309.8
3UTR-3UTR CAA 90 bp AAGGCAAAGGAGAAGCAAGACACATCTTCCATGGGGGCAGGCAAGAGAGAGCATCAGGGCGCCGAGCCATaGGCAGGGGCCAGGCTGCTG +
Preference number: 3 (lower is better)
Translates to: KAKEKQDTSSMGAGKREHQGAEP*AGARLL
Trigger: CAGCAGCCTGGCCCCTGCCAATGGCTCGGCGCCCTG...ATGCTCTCTCTTGCCTGCCCCCATGGAAGATGTGTCTTGCTTCTCCTTTGCCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000635811.1
3UTR TCA 72 bp AACCACCAGCATCCCCACCTGAATGCCCCGGAAGTCTaGCGGTTAACCTGTGCAGGCCCTGGTCAGGCCTGT +
Preference number: 3 (lower is better)
Translates to: NHQHPHLNAPEV*RLTCAGPGQAC
Trigger: ACAGGCCTGACCAGGGCCTGCACAGGTTAACCGTCAGACTTCCGGGGCATTCAGGTGGGGATGCTGGTGGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294309.8
3UTR GCA 72 bp GAATGCGGGTTGGACGCCGTCCCAAAGCACAGAGGGTaGAGGGCCAGAACGGCAACCACTCAAGTGACTCAG +
Preference number: 3 (lower is better)
Translates to: ECGLDAVPKHRG*RARTATTQVTQ
Trigger: CTGAGTCACTTGAGTGGTTGCCGTTCTGGCCCTGCACCCTCTGTGCTTTGGGACGGCGTCCAACCCGCATTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294309.8
3UTR GCA 72 bp GGAGGACTCCTGTCCTTTGACCTGAGGCCAAGAGCCTaGTCTGACCCCTTGTCACCCTTCCCAACTGTGCCC +
Preference number: 3 (lower is better)
Translates to: GGLLSFDLRPRA*SDPLSPFPTVP
Trigger: GGGCACAGTTGGGAAGGGTGACAAGGGGTCAGAGCAGGCTCTTGGCCTCAGGTCAAAGGACAGGAGTCCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000635811.1
ENST00000637342.1
ENST00000637504.1
3UTR-3UTR CAA 90 bp AGAGCCCGCCACGGACTAGACATGTTGGGCTACACGGGCCCTGCACCAGGGCAGGGAGGCCGCTGCTTCTaGCATTTTTGTCTGAAAGGT +
Preference number: 3 (lower is better)
Translates to: RARHGLDMLGYTGPAPGQGGRCF*HFCLKG
Trigger: ACCTTTCAGACAAAAATGCAAGAAGCAGCGGCCTCC...CTGCCCTGGTGCAGGGCCCGTGTAGCCCAACATGTCTAGTCCGTGGCGGGCTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635811.1
3UTR TCA 72 bp GTCGCCATGACCACAAAGCCACGTGCGACTCACTCCTaGCATGAATGCGGGTTGGACGCCGTCCCAAAGCAC +
Preference number: 3 (lower is better)
Translates to: VAMTTKPRATHS*HECGLDAVPKH
Trigger: GTGCTTTGGGACGGCGTCCAACCCGCATTCATGTCAGGAGTGAGTCGCACGTGGCTTTGTGGTCATGGCGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294309.8
3UTR TCA 72 bp GAGACGGAGCCACCGTCCAGGCGGATTAAGTCGCCATaGCCACAAAGCCACGTGCGACTCACTCCTGACATG +
Preference number: 3 (lower is better)
Translates to: ETEPPSRRIKSP*PQSHVRLTPDM
Trigger: CATGTCAGGAGTGAGTCGCACGTGGCTTTGTGGTCATGGCGACTTAATCCGCCTGGACGGTGGCTCCGTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294309.8
3UTR GCA 72 bp GCAAAGTCATCGAAGTTGTTGGCCCAGTACTCCAGCTaGTCGAAGCTCCCACAGGGCGCCGAGCCATTGGCA +
Preference number: 3 (lower is better)
Translates to: AKSSKLLAQYSS*SKLPQGAEPLA
Trigger: TGCCAATGGCTCGGCGCCCTGTGGGAGCTTCGAGCAGCTGGAGTACTGGGCCAACAACTTCGATGACTTTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635811.1
3UTR CCA 72 bp CACCGTCAGGAGCATCGTGAGGAGTTGATGCTGTTCTaGGGACTCCACGTGAGAGCCTCCTGGGTCACTGCT +
Preference number: 3 (lower is better)
Translates to: HRQEHREELMLF*GLHVRASWVTA
Trigger: AGCAGTGACCCAGGAGGCTCTCACGTGGAGTCCCCAGAACAGCATCAACTCCTCACGATGCTCCTGACGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637504.1
3UTR-3UTR CAA 90 bp TCCCACAGGGGCTATGGCGTGGGCTCAGCACCTCTGAAGGAAAAGCAGATGAAAGTGGTGTCCCCGGAGTaGTTTCTGGGAGTTGCTGGG +
Preference number: 3 (lower is better)
Translates to: SHRGYGVGSAPLKEKQMKVVSPE*FLGVAG
Trigger: CCCAGCAACTCCCAGAAACAACTCCGGGGACACCAC...TTTCATCTGCTTTTCCTTCAGAGGTGCTGAGCCCACGCCATAGCCCCTGTGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000294309.8
3UTR TCA 72 bp CATGACCACAAAGCCACGTGCGACTCACTCCTGACATaGATGCGGGTTGGACGCCGTCCCAAAGCACAGAGG +
Preference number: 3 (lower is better)
Translates to: HDHKATCDSLLT*MRVGRRPKAQR
Trigger: CCTCTGTGCTTTGGGACGGCGTCCAACCCGCATTCATGTCAGGAGTGAGTCGCACGTGGCTTTGTGGTCATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294309.8
3UTR TCA 72 bp ACACAGCAGAGTCAGGAGGACTCCTGTCCTTTGACCTaGGGCCAAGAGCCTGCTCTGACCCCTTGTCACCCT +
Preference number: 3 (lower is better)
Translates to: TQQSQEDSCPLT*GQEPALTPCHP
Trigger: AGGGTGACAAGGGGTCAGAGCAGGCTCTTGGCCTCAGGTCAAAGGACAGGAGTCCTCCTGACTCTGCTGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000635811.1
ENST00000637342.1
ENST00000637504.1
3UTR GCA 72 bp TCTCTCCATGTCAAACCACCAGCATCCCCACCTGAATaGCCCGGAAGTCTGACGGTTAACCTGTGCAGGCCC +
Preference number: 3 (lower is better)
Translates to: SLHVKPPASPPE*PGSLTVNLCRP
Trigger: GGGCCTGCACAGGTTAACCGTCAGACTTCCGGGGCATTCAGGTGGGGATGCTGGTGGTTTGACATGGAGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294309.8
3UTR GCA 72 bp CTGGGTGCTGGGTGGATAATGTTCTTTGCTGTAATCTaGTCCTTCCGAGGGTGCCTTCCCACTGGCCGCCCT +
Preference number: 3 (lower is better)
Translates to: LGAGWIMFFAVI*SFRGCLPTGRP
Trigger: AGGGCGGCCAGTGGGAAGGCACCCTCGGAAGGAGCAGATTACAGCAAAGAACATTATCCACCCAGCACCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635811.1
3UTR GCA 72 bp GTGCCTCCTCCTGGGTGCTGGGTGGATAATGTTCTTTaGTGTAATCTGCTCCTTCCGAGGGTGCCTTCCCAC +
Preference number: 3 (lower is better)
Translates to: VPPPGCWVDNVL*CNLLLPRVPSH
Trigger: GTGGGAAGGCACCCTCGGAAGGAGCAGATTACAGCAAAGAACATTATCCACCCAGCACCCAGGAGGAGGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635811.1
3UTR CCA 72 bp ACCTCCCCACTCATTCATTACAAAGGGGTCGTTCACTaGGCAGTGGAGAAGCTGACCAGGGCCACCTTCACC +
Preference number: 3 (lower is better)
Translates to: TSPLIHYKGVVH*AVEKLTRATFT
Trigger: GGTGAAGGTGGCCCTGGTCAGCTTCTCCACTGCCCAGTGAACGACCCCTTTGTAATGAATGAGTGGGGAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294309.8
3UTR-3UTR CAA 90 bp GAGCTCCCGGGTGCAGCAATCTGCAACAGCCAGGAGCACGCCTCGCACCCACATGGCTTATACATGCCTTaGAGCAAAACAGAAAAGGTG +
Preference number: 3 (lower is better)
Translates to: ELPGAAICNSQEHASHPHGLYMP*SKTEKV
Trigger: CACCTTTTCTGTTTTGCTCAAAGGCATGTATAAGCC...ATGTGGGTGCGAGGCGTGCTCCTGGCTGTTGCAGATTGCTGCACCCGGGAGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294309.8
3UTR-3UTR CAA 90 bp ACTGAAGCAGCTATAAAAGAAAGCGGAGGGCACGGCGCCTCCCTGAAGCACCAGGCAAAGTCATCGAAGTaGTTGGCCCAGTACTCCAGC +
Preference number: 3 (lower is better)
Translates to: TEAAIKESGGHGASLKHQAKSSK*LAQYSS
Trigger: GCTGGAGTACTGGGCCAACAACTTCGATGACTTTGC...CTGGTGCTTCAGGGAGGCGCCGTGCCCTCCGCTTTCTTTTATAGCTGCTTCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635811.1
3UTR-3UTR CAA 90 bp GCTGTGGACGGGGATGTATGTGACTCACAACTTCATCGGGGCATGGAGAGTCTGGAGCATCGTGAGGAGTaGATGCTGTTCTGGGGACTC +
Preference number: 3 (lower is better)
Translates to: AVDGDVCDSQLHRGMESLEHREE*MLFWGL
Trigger: GAGTCCCCAGAACAGCATCAACTCCTCACGATGCTC...CAGACTCTCCATGCCCCGATGAAGTTGTGAGTCACATACATCCCCGTCCACAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000635811.1
ENST00000637504.1
3UTR TCA 72 bp GAAAGGTCCCTGTGGAGTCGACGAGGGAATTCTCACTaGAGCAGCTATAAAAGAAAGCGGAGGGCACGGCGC +
Preference number: 3 (lower is better)
Translates to: ERSLWSRRGNSH*SSYKRKRRARR
Trigger: GCGCCGTGCCCTCCGCTTTCTTTTATAGCTGCTTCAGTGAGAATTCCCTCGTCGACTCCACAGGGACCTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294309.8
ENST00000635811.1
3UTR TCA 72 bp GGGACAGGGGAGGCCGCTGCTTCTTGCATTTTTGTCTaGAAGGTCCCTGTGGAGTCGACGAGGGAATTCTCA +
Preference number: 3 (lower is better)
Translates to: GTGEAAASCIFV*KVPVESTREFS
Trigger: TGAGAATTCCCTCGTCGACTCCACAGGGACCTTTCAGACAAAAATGCAAGAAGCAGCGGCCTCCCCTGTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294309.8
ENST00000635811.1
3UTR TCA 72 bp AAACCATTGGTCAATCTGGACCTGGCGTGCTTCAGGTaGCAACAAGGCTTTCCACACACTGCTCGCTCGCCC +
Preference number: 3 (lower is better)
Translates to: KPLVNLDLACFR*QQGFPHTARSP
Trigger: GGGCGAGCGAGCAGTGTGTGGAAAGCCTTGTTGTCACCTGAAGCACGCCAGGTCCAGATTGACCAATGGTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294309.8
3UTR TCA 72 bp CTACTGAGTACCGGGTGCTGTGGACGGGGATGTATGTaGCTCACAACTTCATCGGGGCATGGAGAGTCTGTC +
Preference number: 3 (lower is better)
Translates to: LLSTGCCGRGCM*LTTSSGHGESV
Trigger: GACAGACTCTCCATGCCCCGATGAAGTTGTGAGTCACATACATCCCCGTCCACAGCACCCGGTACTCAGTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000635811.1
ENST00000637504.1
3UTR GCA 72 bp ATAATGTTCTTTGCTGTAATCTGCTCCTTCCGAGGGTaGCTTCCCACTGGCCGCCCTGCACAAACAGCCCCA +
Preference number: 3 (lower is better)
Translates to: IMFFAVICSFRG*LPTGRPAQTAP
Trigger: TGGGGCTGTTTGTGCAGGGCGGCCAGTGGGAAGGCACCCTCGGAAGGAGCAGATTACAGCAAAGAACATTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635811.1
3UTR CCA 72 bp CTGCAACAGCCAGGAGCACGCCTCGCACCCACATCCTaGTTCCTGATGCTACTCTCCATTCAAAAGAACAGG +
Preference number: 3 (lower is better)
Translates to: LQQPGARLAPTS*FLMLLSIQKNR
Trigger: CCTGTTCTTTTGAATGGAGAGTAGCATCAGGAACCAGGATGTGGGTGCGAGGCGTGCTCCTGGCTGTTGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294309.8
3UTR CCA 72 bp CACCGTCAGGAGCATCGTGAGGAGTTGATGCTGTTCTaGGGACTCCACGTGAGAGCCTCCTGGGTCAATATT +
Preference number: 3 (lower is better)
Translates to: HRQEHREELMLF*GLHVRASWVNI
Trigger: AATATTGACCCAGGAGGCTCTCACGTGGAGTCCCCAGAACAGCATCAACTCCTCACGATGCTCCTGACGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635811.1
3UTR TCA 72 bp CCTGCCAGTTGTTCACCACCATCAAGTTCCACAGAGTaGCCAGGGCAGCCGCAAAGTCATCGAAGTTGTTGG +
Preference number: 3 (lower is better)
Translates to: PASCSPPSSSTE*PGQPQSHRSCW
Trigger: CCAACAACTTCGATGACTTTGCGGCTGCCCTGGTCACTCTGTGGAACTTGATGGTGGTGAACAACTGGCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635811.1
3UTR-3UTR CAA 90 bp TCCCACAGGGGCTATGGCGTGGGCTCAGCACCTCTGAAGGAAAAGCAGATGAAAAGTTGTTTCTGGGAGTaGCTGGGTCCACCTTACCTT +
Preference number: 3 (lower is better)
Translates to: SHRGYGVGSAPLKEKQMKSCFWE*LGPPYL
Trigger: AAGGTAAGGTGGACCCAGCAACTCCCAGAAACAACT...TTTCATCTGCTTTTCCTTCAGAGGTGCTGAGCCCACGCCATAGCCCCTGTGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000294309.8
3UTR TCA 72 bp ATTACAAAGGGGTCGTTCACTGGGCAGTGGAGAAGCTaGCCAGGGCCACCTTCACCAAGCAACAAGAGAGAA +
Preference number: 3 (lower is better)
Translates to: ITKGSFTGQWRS*PGPPSPSNKRE
Trigger: TTCTCTCTTGTTGCTTGGTGAAGGTGGCCCTGGTCAGCTTCTCCACTGCCCAGTGAACGACCCCTTTGTAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294309.8
3UTR TCA 72 bp AGCCAGGAGCACGCCTCGCACCCACATCCTGGTTCCTaGTGCTACTCTCCATTCAAAAGAACAGGTCTTCTT +
Preference number: 3 (lower is better)
Translates to: SQEHASHPHPGS*CYSPFKRTGLL
Trigger: AAGAAGACCTGTTCTTTTGAATGGAGAGTAGCATCAGGAACCAGGATGTGGGTGCGAGGCGTGCTCCTGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294309.8
3UTR CCA 72 bp GAGTGTGATGGGGAGTGGTGTCCCCGGAGTTGTTTCTaGGAGTTGCTGGGTCCACCTTACCTTAAATGTAGT +
Preference number: 3 (lower is better)
Translates to: ECDGEWCPRSCF*ELLGPPYLKCS
Trigger: ACTACATTTAAGGTAAGGTGGACCCAGCAACTCCCAGAAACAACTCCGGGGACACCACTCCCCATCACACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294309.8
3UTR CCA 72 bp ACATTTATGGGACCACCTACTGAGTACCGGGTGCTGTaGACGGGGATGTATGTGACTCACAACTTCATCGGG +
Preference number: 3 (lower is better)
Translates to: TFMGPPTEYRVL*TGMYVTHNFIG
Trigger: CCCGATGAAGTTGTGAGTCACATACATCCCCGTCCACAGCACCCGGTACTCAGTAGGTGGTCCCATAAATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635811.1
ENST00000637504.1
3UTR CCA 72 bp GGGTCAAGCACTGCTTTTTCTGCATTGCATTCACTGTaGGCTTCAGACACAGCAGAGTCAGGAGGACTCCTG +
Preference number: 3 (lower is better)
Translates to: GSSTAFSALHSL*ASDTAESGGLL
Trigger: CAGGAGTCCTCCTGACTCTGCTGTGTCTGAAGCCCACAGTGAATGCAATGCAGAAAAAGCAGTGCTTGACCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000635811.1
ENST00000637342.1
ENST00000637504.1
3UTR CCA 72 bp TCACAGTTGCACATGGCCAGGGAGGCCTCACAATCATaGCAGAAGGCAAAGGAGAAGCAAGACACATCTTCC +
Preference number: 3 (lower is better)
Translates to: SQLHMAREASQS*QKAKEKQDTSS
Trigger: GGAAGATGTGTCTTGCTTCTCCTTTGCCTTCTGCCATGATTGTGAGGCCTCCCTGGCCATGTGCAACTGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635811.1
ENST00000637504.1
3UTR-3UTR CAA 90 bp CCATCCTGTGACACTCCTAGACGAAACGCAGACCCAGAACCTACCACAAGGAAACTGTTCTGTAGATGGTaGTTGGGCCACACGCAAAGG +
Preference number: 3 (lower is better)
Translates to: PSCDTPRRNADPEPTTRKLFCRW*LGHTQR
Trigger: CCTTTGCGTGTGGCCCAACAACCATCTACAGAACAG...TTTCCTTGTGGTAGGTTCTGGGTCTGCGTTTCGTCTAGGAGTGTCACAGGATGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294309.8
3UTR-3UTR CAA 90 bp GCAGGCCCCAGCCTTGACCCTGGCTTTCACGGTCCATTGGGTTTTGTTATAATTCTGTTCTGTAGATGGTaGTTGGGCCACACGCAAAGG +
Preference number: 3 (lower is better)
Translates to: AGPSLDPGFHGPLGFVIILFCRW*LGHTQR
Trigger: CCTTTGCGTGTGGCCCAACAACCATCTACAGAACAG...AATTATAACAAAACCCAATGGACCGTGAAAGCCAGGGTCAAGGCTGGGGCCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635811.1
3UTR-3UTR CAA 90 bp ACTAGACATGTTGGGCTACACGGGCCCTGCACCAGGGCAGTCATCATCTTTACCAGAAACACCTGCCAGTaGTTCACCACCATCAAGTTC +
Preference number: 3 (lower is better)
Translates to: TRHVGLHGPCTRAVIIFTRNTCQ*FTTIKF
Trigger: GAACTTGATGGTGGTGAACAACTGGCAGGTGTTTCT...GGTAAAGATGATGACTGCCCTGGTGCAGGGCCCGTGTAGCCCAACATGTCTAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635811.1
3UTR-3UTR CAA 90 bp GGACACAGCCCAATCATATCAGGGATCCTAACCCCGGAGAAAACAAAGGGTCAAAGGGCCAGAAACAGGTaGACCCAGATGACAGACGAC +
Preference number: 3 (lower is better)
Translates to: GHSPIISGILTPEKTKGQRARNR*TQMTDD
Trigger: GTCGTCTGTCATCTGGGTCAACCTGTTTCTGGCCCT...TTGACCCTTTGTTTTCTCCGGGGTTAGGATCCCTGATATGATTGGGCTGTGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635811.1
3UTR-3UTR CAA 90 bp TGTGACACTCCTAGACGAAACGCAGACCCAGAACCTACCACAAGGAAACGTCACGGAGGCCGCTGCTTCTaGCATTTTTGTCTGAAAGGT +
Preference number: 3 (lower is better)
Translates to: CDTPRRNADPEPTTRKRHGGRCF*HFCLKG
Trigger: ACCTTTCAGACAAAAATGCAAGAAGCAGCGGCCTCC...GTGACGTTTCCTTGTGGTAGGTTCTGGGTCTGCGTTTCGTCTAGGAGTGTCACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000294309.8
3UTR TCA 72 bp ACAGAGGGTGCAGGGCCAGAACGGCAACCACTCAAGTaGCTCAGAAGGAAGCTTCTCTTTACTGTGCTTACA +
Preference number: 3 (lower is better)
Translates to: TEGAGPERQPLK*LRRKLLFTVLT
Trigger: TGTAAGCACAGTAAAGAGAAGCTTCCTTCTGAGTCACTTGAGTGGTTGCCGTTCTGGCCCTGCACCCTCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294309.8
3UTR TCA 72 bp CTGACAGTGACAACTTCCATTTGGAAAGCTGTTTGCTaGAGGTTTTGGCAGCAGGGCGTCCACACAAGAGGG +
Preference number: 3 (lower is better)
Translates to: LTVTTSIWKAVC*RFWQQGVHTRG
Trigger: CCCTCTTGTGTGGACGCCCTGCTGCCAAAACCTTCAGCAAACAGCTTTCCAAATGGAAGTTGTCACTGTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294309.8
3UTR GCA 72 bp CCAGGATACACCTCACAGCCATGTGCCCTTGTGCAATaGACAACCCAAGCAACCTTACTCAACAACCCTACT +
Preference number: 3 (lower is better)
Translates to: PGYTSQPCALVQ*TTQATLLNNPT
Trigger: AGTAGGGTTGTTGAGTAAGGTTGCTTGGGTTGTGCATTGCACAAGGGCACATGGCTGTGAGGTGTATCCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294309.8
3UTR GCA 72 bp ATGGGGAGTGGTGTCCCCGGAGTTGTTTCTGGGAGTTaGTGGGTCCACCTTACCTTAAATGTAGTCAACCAA +
Preference number: 3 (lower is better)
Translates to: MGSGVPGVVSGS*WVHLTLNVVNQ
Trigger: TTGGTTGACTACATTTAAGGTAAGGTGGACCCAGCAACTCCCAGAAACAACTCCGGGGACACCACTCCCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294309.8
3UTR CCA 72 bp ACAAGGAAACGTCACATGAACACAACCTGGGAGCCATaGGCTTATCTCCAGAAGTGCCAAGGTCGTCTAAGC +
Preference number: 3 (lower is better)
Translates to: TRKRHMNTTWEP*AYLQKCQGRLS
Trigger: GCTTAGACGACCTTGGCACTTCTGGAGATAAGCCCATGGCTCCCAGGTTGTGTTCATGTGACGTTTCCTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294309.8
3UTR CCA 72 bp GAACCTACCACAAGGAAACGTCACATGAACACAACCTaGGAGCCATGGGCTTATCTCCAGAAGTGCCAAGGT +
Preference number: 3 (lower is better)
Translates to: EPTTRKRHMNTT*EPWAYLQKCQG
Trigger: ACCTTGGCACTTCTGGAGATAAGCCCATGGCTCCCAGGTTGTGTTCATGTGACGTTTCCTTGTGGTAGGTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294309.8
3UTR CCA 72 bp GGTTCCAAGTTCATTCACTTGTGCCACAAACATTTATaGGACCACCTACTGAGTACCGGGTGCTGTGGACGG +
Preference number: 3 (lower is better)
Translates to: GSKFIHLCHKHL*DHLLSTGCCGR
Trigger: CCGTCCACAGCACCCGGTACTCAGTAGGTGGTCCCATAAATGTTTGTGGCACAAGTGAATGAACTTGGAACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000635811.1
ENST00000637342.1
ENST00000637504.1
3UTR-3UTR CAA 90 bp ACTAGACATGTTGGGCTACACGGGCCCTGCACCAGGGCAGTCATCATCTTTACCGGCTTTCACGGTCCATaGGGTTTTGTTATAATTTAC +
Preference number: 3 (lower is better)
Translates to: TRHVGLHGPCTRAVIIFTGFHGP*GFVIIY
Trigger: GTAAATTATAACAAAACCCAATGGACCGTGAAAGCC...GGTAAAGATGATGACTGCCCTGGTGCAGGGCCCGTGTAGCCCAACATGTCTAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000635811.1
ENST00000637342.1
ENST00000637504.1
3UTR CCA 72 bp AGAAAGGGCCTTACAGCTATGGAAAGAGAGAAAAACTaGAACGTACCCTGTGGTGCTGGGCTAAAATCGGAG +
Preference number: 3 (lower is better)
Translates to: RKGLTAMEREKN*NVPCGAGLKSE
Trigger: CTCCGATTTTAGCCCAGCACCACAGGGTACGTTCCAGTTTTTCTCTCTTTCCATAGCTGTAAGGCCCTTTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000294309.8
3UTR CCA 72 bp GGAAAGAGAGAAAAACTGGAACGTACCCTGTGGTGCTaGGCTAAAATCGGAGGTATTAGTATCATTCCCAGC +
Preference number: 3 (lower is better)
Translates to: GKREKLERTLWC*AKIGGISIIPS
Trigger: GCTGGGAATGATACTAATACCTCCGATTTTAGCCCAGCACCACAGGGTACGTTCCAGTTTTTCTCTCTTTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000294309.8
3UTR CCA 72 bp TTGATGCTGTTCTGGGGACTCCACGTGAGAGCCTCCTaGGTCAATATTCATAGGGCACATGTGATATTTCAA +
Preference number: 3 (lower is better)
Translates to: LMLFWGLHVRAS*VNIHRAHVIFQ
Trigger: TTGAAATATCACATGTGCCCTATGAATATTGACCCAGGAGGCTCTCACGTGGAGTCCCCAGAACAGCATCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635811.1
3UTR CCA 72 bp ATGTGGGGATCATTACAATTCAAGGCAAGATTTGGGTaGGGACACAGCCCAATCATATCAGGGATCCTAACC +
Preference number: 3 (lower is better)
Translates to: MWGSLQFKARFG*GHSPIISGILT
Trigger: GGTTAGGATCCCTGATATGATTGGGCTGTGTCCCCACCCAAATCTTGCCTTGAATTGTAATGATCCCCACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000635811.1
ENST00000637342.1
ENST00000637504.1
3UTR-3UTR CAA 90 bp ACAGGAAATAAGGTCACCCATTGGCTTATACATGCCTTTGAGCAAAACAGAAAACCACACGCAAAGGACTaGGTTCCTGTCCCCAGCTTA +
Preference number: 3 (lower is better)
Translates to: TGNKVTHWLIHAFEQNRKPHAKD*VPVPSL
Trigger: TAAGCTGGGGACAGGAACCAAGTCCTTTGCGTGTGG...TTTTCTGTTTTGCTCAAAGGCATGTATAAGCCAATGGGTGACCTTATTTCCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000294309.8
3UTR CCA 72 bp GGAAAAAGTAAAGGCAGTTTGACAGGGATGGGATATTaGCATCGCTTCACACTACCTCCCCACTCATTCATT +
Preference number: 3 (lower is better)
Translates to: GKSKGSLTGMGY*HRFTLPPHSFI
Trigger: AATGAATGAGTGGGGAGGTAGTGTGAAGCGATGCCAATATCCCATCCCTGTCAAACTGCCTTTACTTTTTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000294309.8
3UTR-3UTR CAA 90 bp ATGTGGGGATCATTACAATTCAAGGCAAGATTTGGGTGGGGACACAGCCCAATCGGCTTTCACGGTCCATaGGGTTTTGTTATAATTTAC +
Preference number: 3 (lower is better)
Translates to: MWGSLQFKARFGWGHSPIGFHGP*GFVIIY
Trigger: GTAAATTATAACAAAACCCAATGGACCGTGAAAGCC...GATTGGGCTGTGTCCCCACCCAAATCTTGCCTTGAATTGTAATGATCCCCACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000635811.1
ENST00000637342.1
ENST00000637504.1
3UTR CCA 72 bp TGTCCATCGCCGCAAACATGTATCTCTTCTTTACGTTaGGAACATTCTGATTCTTCTCTTCTAGCTGTGCCT +
Preference number: 3 (lower is better)
Translates to: CPSPQTCISSLR*EHSDSSLLAVP
Trigger: AGGCACAGCTAGAAGAGAAGAATCAGAATGTTCCCAACGTAAAGAAGAGATACATGTTTGCGGCGATGGACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635811.1
3UTR CCA 72 bp AGCTATGGAAAGAGAGAAAAACTGGAACGTACCCTGTaGTGCTGGGCTAAAATCGGAGGTATTAGTATCATT +
Preference number: 3 (lower is better)
Translates to: SYGKREKLERTL*CWAKIGGISII
Trigger: AATGATACTAATACCTCCGATTTTAGCCCAGCACCACAGGGTACGTTCCAGTTTTTCTCTCTTTCCATAGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000294309.8
3UTR CCA 72 bp GGGTTTTGTTATAATTTACAATTTCCACTAGATGGATaGTTCCAAGTTCATTCACTTGTGCCACAAACATTT +
Preference number: 3 (lower is better)
Translates to: GFCYNLQFPLDG*FQVHSLVPQTF
Trigger: AAATGTTTGTGGCACAAGTGAATGAACTTGGAACCATCCATCTAGTGGAAATTGTAAATTATAACAAAACCC
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000635811.1
ENST00000637342.1
ENST00000637504.1
CDS-3UTR GCA 90 bp GTCTCTTCCTGCCTGGCTGGCCACAGCATGGCCGCCTCTTCCATGACGGGCACCCTCTCCTGCCGCCCCTaGTGGGACGGCAGCCCGGAC +
Preference number: 4 (lower is better)
Translates to: VSSCLAGHSMAASSMTGTLSCRP*WDGSPD
Trigger: GTCCGGGCTGCCGTCCCAGCAGGGGCGGCAGGAGAG...GGTGCCCGTCATGGAAGAGGCGGCCATGCTGTGGCCAGCCAGGCAGGAAGAGAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294309.8
ENST00000542467.1
ENST00000635811.1
CDS-3UTR GCA 90 bp CCATCCCTTCCTGGTCCCGCTGAGCTCGGGCACAGACCGGGCACCAGGCTCGGTAGCCACAGGTGCGGGTaGTGGCTCAGCCTCTCTGTG +
Preference number: 4 (lower is better)
Translates to: PSLPGPAELGHRPGTRLGSHRCG*WLSLSV
Trigger: CACAGAGAGGCTGAGCCAGCACCCGCACCTGTGGCT...ACCGAGCCTGGTGCCCGGTCTGTGCCCGAGCTCAGCGGGACCAGGAAGGGATGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294309.8
CDS-3UTR GCA 90 bp CTCTTCCTGCCTGGCTGGCCACAGCATGGCCGCCTCTTCCATGACGGGCACCTGCTGCACAGCCACAGGTaGGGGTGCTGGCTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: LFLPGWPQHGRLFHDGHLLHSHR*GCWLSL
Trigger: GAGGCTGAGCCAGCACCCGCACCTGTGGCTGTGCAG...CAGGTGCCCGTCATGGAAGAGGCGGCCATGCTGTGGCCAGCCAGGCAGGAAGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294309.8
ENST00000542467.1
ENST00000635811.1
CDS-3UTR GCA 90 bp GTCTCTTCCTGCCTGGCTGGCCACAGCATGGCCGCCTCTTCCATGACGGGCACCCTGCACAGCCACAGGTaGGGGTGCTGGCTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: VSSCLAGHSMAASSMTGTLHSHR*GCWLSL
Trigger: GAGGCTGAGCCAGCACCCGCACCTGTGGCTGTGCAG...GGTGCCCGTCATGGAAGAGGCGGCCATGCTGTGGCCAGCCAGGCAGGAAGAGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294309.8
ENST00000542467.1
ENST00000635811.1
CDS-3UTR CCA 90 bp CTCTTCCTGCCTGGCTGGCCACAGCATGGCCGCCTCTTCCATGACGGGCACCTGCAGCAGCCCACGCGCTaGACCCGACCCTCAGAAGCT +
Preference number: 4 (lower is better)
Translates to: LFLPGWPQHGRLFHDGHLQQPTR*TRPSEA
Trigger: AGCTTCTGAGGGTCGGGTCCAGCGCGTGGGCTGCTG...CAGGTGCCCGTCATGGAAGAGGCGGCCATGCTGTGGCCAGCCAGGCAGGAAGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294309.8
ENST00000542467.1
ENST00000635811.1
CDS-3UTR CCA 90 bp CCACAGCATGGCCGCCTCTTCCATGACGGGCACCTGTGTAGGCCAGCCTCTCTCGCAGCAGCCCGACGCTaGCCATTTCCGGCAGCGACC +
Preference number: 4 (lower is better)
Translates to: PQHGRLFHDGHLCRPASLAAARR*PFPAAT
Trigger: GGTCGCTGCCGGAAATGGCCAGCGTCGGGCTGCTGC...GAGAGAGGCTGGCCTACACAGGTGCCCGTCATGGAAGAGGCGGCCATGCTGTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294309.8
ENST00000542467.1
ENST00000635811.1
CDS-3UTR CCA 90 bp AGAGCCCGCCACGGACTAGACATGTTGGGCTACACGGGCCCTGCACCAGGGCAGAGAGGCACAGGTGGATaGCCAGCAGCAGCCCGACGC +
Preference number: 4 (lower is better)
Translates to: RARHGLDMLGYTGPAPGQRGTGG*PAAARR
Trigger: GCGTCGGGCTGCTGCTGGCCATCCACCTGTGCCTCT...CTGCCCTGGTGCAGGGCCCGTGTAGCCCAACATGTCTAGTCCGTGGCGGGCTCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000635811.1
ENST00000637342.1
ENST00000637504.1
CDS-3UTR CCA 90 bp GTCTCTTCCTGCCTGGCTGGCCACAGCATGGCCGCCTCTTCCATGACGGGCACCCTGGTAGGTGGCCTCTaGGGTCCCAGCAAGGGGCTG +
Preference number: 4 (lower is better)
Translates to: VSSCLAGHSMAASSMTGTLVGGL*GPSKGL
Trigger: CAGCCCCTTGCTGGGACCCCAGAGGCCACCTACCAG...GGTGCCCGTCATGGAAGAGGCGGCCATGCTGTGGCCAGCCAGGCAGGAAGAGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294309.8
ENST00000542467.1
ENST00000635811.1
CDS-3UTR TCA 90 bp AAGGTCTCTTCCTGCCTGGCTGGCCACAGCATGGCCGCCTCTTCCATGACGGGCCGTCCGCCGTGCTGGTaGGTGAGGATGGGGTCTCGA +
Preference number: 4 (lower is better)
Translates to: KVSSCLAGHSMAASSMTGRPPCW*VRMGSR
Trigger: TCGAGACCCCATCCTCACTCACCAGCACGGCGGACG...GCCCGTCATGGAAGAGGCGGCCATGCTGTGGCCAGCCAGGCAGGAAGAGACCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294309.8
ENST00000542467.1
ENST00000635811.1
CDS-3UTR TCA 90 bp CCACAGCATGGCCGCCTCTTCCATGACGGGCACCTGTGTAGGCCAGCCTCTCTCGGCACGGCGCCTCCCTaGAGCACCAGCAGCTGTTCT +
Preference number: 4 (lower is better)
Translates to: PQHGRLFHDGHLCRPASLGTAPP*STSSCS
Trigger: AGAACAGCTGCTGGTGCTTCAGGGAGGCGCCGTGCC...GAGAGAGGCTGGCCTACACAGGTGCCCGTCATGGAAGAGGCGGCCATGCTGTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294309.8
ENST00000542467.1
ENST00000635811.1
CDS-3UTR TCA 90 bp TGGCCACAGCATGGCCGCCTCTTCCATGACGGGCACCTGTGTAGGCCAGCCTCTGGCACGGCGCCTCCCTaGAGCACCAGCAGCTGTTCT +
Preference number: 4 (lower is better)
Translates to: WPQHGRLFHDGHLCRPASGTAPP*STSSCS
Trigger: AGAACAGCTGCTGGTGCTTCAGGGAGGCGCCGTGCC...AGAGGCTGGCCTACACAGGTGCCCGTCATGGAAGAGGCGGCCATGCTGTGGCCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294309.8
ENST00000542467.1
ENST00000635811.1
CDS-3UTR GCA 90 bp CCTGGCTGGCCACAGCATGGCCGCCTCTTCCATGACGGGCACCTGTGTAGGCCAGGCCGACTTGGATGCTaGGGTAAGTGGTCAGCCCCG +
Preference number: 4 (lower is better)
Translates to: PGWPQHGRLFHDGHLCRPGRLGC*GKWSAP
Trigger: CGGGGCTGACCACTTACCGCAGCATCCAAGTCGGCC...TGGCCTACACAGGTGCCCGTCATGGAAGAGGCGGCCATGCTGTGGCCAGCCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294309.8
ENST00000542467.1
ENST00000635811.1
CDS-3UTR GCA 90 bp CTCTTCCTGCCTGGCTGGCCACAGCATGGCCGCCTCTTCCATGACGGGCACCTGAGCCACAGGTGCGGGTaGTGGCTCAGCCTCTCTGTG +
Preference number: 4 (lower is better)
Translates to: LFLPGWPQHGRLFHDGHLSHRCG*WLSLSV
Trigger: CACAGAGAGGCTGAGCCAGCACCCGCACCTGTGGCT...CAGGTGCCCGTCATGGAAGAGGCGGCCATGCTGTGGCCAGCCAGGCAGGAAGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294309.8
ENST00000542467.1
ENST00000635811.1
CDS-3UTR GCA 90 bp CCTGTCCCCAGCTTAGTGGTCCGTCAGAGGAAAGGTCTCTTCCTGCCTGGCTGGCCAGCCTCTCTCTCCTaGCGCCCCTGCTGGGACGGC +
Preference number: 4 (lower is better)
Translates to: PVPSLVVRQRKGLFLPGWPASLS*RPCWDG
Trigger: GCCGTCCCAGCAGGGGCGGCAGGAGAGAGAGGCTGG...CCAGCCAGGCAGGAAGAGACCTTTCCTCTGACGGACCACTAAGCTGGGGACAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000294309.8
ENST00000542467.1
ENST00000635811.1
CDS-3UTR GCA 90 bp AGCCCGCCACGGACTAGACATGTTGGGCTACACGGGCCCTGCACCAGGGCAGTCGGGCTACACGGGCCCTaGACCAGGGCAGTCATCATC +
Preference number: 4 (lower is better)
Translates to: SPPRTRHVGLHGPCTRAVGLHGP*TRAVII
Trigger: GATGATGACTGCCCTGGTGCAGGGCCCGTGTAGCCC...GACTGCCCTGGTGCAGGGCCCGTGTAGCCCAACATGTCTAGTCCGTGGCGGGCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000635811.1
ENST00000637342.1
ENST00000637504.1
CDS-3UTR CCA 90 bp AGTAAGAGCCCGCCACGGACTAGACATGTTGGGCTACACGGGCCCTGCACCAGGGCAGCAGCCCGACGCTaGCCATTTCCGGCAGCGACC +
Preference number: 4 (lower is better)
Translates to: SKSPPRTRHVGLHGPCTRAAARR*PFPAAT
Trigger: GGTCGCTGCCGGAAATGGCCAGCGTCGGGCTGCTGC...CCTGGTGCAGGGCCCGTGTAGCCCAACATGTCTAGTCCGTGGCGGGCTCTTACT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000635811.1
ENST00000637342.1
ENST00000637504.1
CDS-3UTR CCA 90 bp CCACAGCATGGCCGCCTCTTCCATGACGGGCACCTGTGTAGGCCAGCCTCTCTCCGGGGTTGTTGGCCGTaGTCAGCAGCACCAGGAGGG +
Preference number: 4 (lower is better)
Translates to: PQHGRLFHDGHLCRPASLRGCWP*SAAPGG
Trigger: CCCTCCTGGTGCTGCTGACCACGGCCAACAACCCCG...GAGAGAGGCTGGCCTACACAGGTGCCCGTCATGGAAGAGGCGGCCATGCTGTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294309.8
ENST00000542467.1
ENST00000635811.1
CDS-3UTR CCA 90 bp GTCTCTTCCTGCCTGGCTGGCCACAGCATGGCCGCCTCTTCCATGACGGGCACCTGCAGAAACGGAGACTaGTACTCGGGCCTCGGCGGG +
Preference number: 4 (lower is better)
Translates to: VSSCLAGHSMAASSMTGTCRNGD*YSGLGG
Trigger: CCCGCCGAGGCCCGAGTACCAGTCTCCGTTTCTGCA...GGTGCCCGTCATGGAAGAGGCGGCCATGCTGTGGCCAGCCAGGCAGGAAGAGAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294309.8
ENST00000542467.1
ENST00000635811.1
CDS-3UTR CCA 90 bp CCTGGCTGGCCACAGCATGGCCGCCTCTTCCATGACGGGCACCTGTGTAGGCCAAGGTCTCTTCCTGCCTaGCTGGCCACAGCATGGCCG +
Preference number: 4 (lower is better)
Translates to: PGWPQHGRLFHDGHLCRPRSLPA*LATAWP
Trigger: CGGCCATGCTGTGGCCAGCCAGGCAGGAAGAGACCT...TGGCCTACACAGGTGCCCGTCATGGAAGAGGCGGCCATGCTGTGGCCAGCCAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294309.8
ENST00000542467.1
ENST00000635811.1
CDS-3UTR CCA 90 bp TGGCCACAGCATGGCCGCCTCTTCCATGACGGGCACCTGTGTAGGCCAGCCTCTGTGCAGGGGCAACCCTaGCAGGGCCCATCCCTTCCT +
Preference number: 4 (lower is better)
Translates to: WPQHGRLFHDGHLCRPASVQGQP*QGPSLP
Trigger: AGGAAGGGATGGGCCCTGCCAGGGTTGCCCCTGCAC...AGAGGCTGGCCTACACAGGTGCCCGTCATGGAAGAGGCGGCCATGCTGTGGCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294309.8
CDS-3UTR TCA 90 bp GAGCTCCCGGGTGCAGCAATCTGCAACAGCCAGGAGCACGCCTCGCACCCACATTTCACCCCAACTGCCTaGGGGAAGGCTCCTCCCTCC +
Preference number: 4 (lower is better)
Translates to: ELPGAAICNSQEHASHPHFTPTA*GKAPPS
Trigger: GGAGGGAGGAGCCTTCCCTCAGGCAGTTGGGGTGAA...ATGTGGGTGCGAGGCGTGCTCCTGGCTGTTGCAGATTGCTGCACCCGGGAGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294309.8
CDS-3UTR TCA 90 bp GGGGAGTGGTGTCCCCGGAGTTGTTTCTGGGAGTTGCTGGGTCCACCTTACCTTCCTTCCTGGTCCCGCTaGGCTCGGGCACAGACCGGG +
Preference number: 4 (lower is better)
Translates to: GEWCPRSCFWELLGPPYLPSWSR*ARAQTG
Trigger: CCCGGTCTGTGCCCGAGCTCAGCGGGACCAGGAAGG...AAGGTAAGGTGGACCCAGCAACTCCCAGAAACAACTCCGGGGACACCACTCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294309.8
CDS-3UTR GCA 90 bp CTCTTCCTGCCTGGCTGGCCACAGCATGGCCGCCTCTTCCATGACGGGCACCTGCAGGGCCGACTTGGATaGTGCGGTAAGTGGTCAGCC +
Preference number: 4 (lower is better)
Translates to: LFLPGWPQHGRLFHDGHLQGRLG*CGKWSA
Trigger: GGCTGACCACTTACCGCAGCATCCAAGTCGGCCCTG...CAGGTGCCCGTCATGGAAGAGGCGGCCATGCTGTGGCCAGCCAGGCAGGAAGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294309.8
ENST00000542467.1
ENST00000635811.1
CDS-3UTR GCA 90 bp CTCTTCCTGCCTGGCTGGCCACAGCATGGCCGCCTCTTCCATGACGGGCACCTGCCACAGCCTGATCAATaGAGAGGTCCCACCTGGCCG +
Preference number: 4 (lower is better)
Translates to: LFLPGWPQHGRLFHDGHLPQPDQ*RGPTWP
Trigger: CGGCCAGGTGGGACCTCTGCATTGATCAGGCTGTGG...CAGGTGCCCGTCATGGAAGAGGCGGCCATGCTGTGGCCAGCCAGGCAGGAAGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294309.8
ENST00000542467.1
ENST00000635811.1
CDS-3UTR GCA 90 bp AGCCCGCCACGGACTAGACATGTTGGGCTACACGGGCCCTGCACCAGGGCAGTCCCACAGCCTGATCAATaGAGAGGTCCCACCTGGCCG +
Preference number: 4 (lower is better)
Translates to: SPPRTRHVGLHGPCTRAVPQPDQ*RGPTWP
Trigger: CGGCCAGGTGGGACCTCTGCATTGATCAGGCTGTGG...GACTGCCCTGGTGCAGGGCCCGTGTAGCCCAACATGTCTAGTCCGTGGCGGGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000635811.1
ENST00000637342.1
ENST00000637504.1
CDS-3UTR GCA 90 bp GAGTCTGTCCACCACCGTCAGGAGCATCGTGAGGAGTTGATGCTGTTCTGGGGACTCTCCTGCCGCCCCTaGTGGGACGGCAGCCCGGAC +
Preference number: 4 (lower is better)
Translates to: ESVHHRQEHREELMLFWGLSCRP*WDGSPD
Trigger: GTCCGGGCTGCCGTCCCAGCAGGGGCGGCAGGAGAG...TCCCCAGAACAGCATCAACTCCTCACGATGCTCCTGACGGTGGTGGACAGACTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635811.1
CDS-3UTR GCA 90 bp AAAGAAAGCGGAGGGCACGGCGCCTCCCTGAAGCACCAGCAGCTGTTCTGTAGACCAGCCTCTCTCTCCTaGCGCCCCTGCTGGGACGGC +
Preference number: 4 (lower is better)
Translates to: KESGGHGASLKHQQLFCRPASLS*RPCWDG
Trigger: GCCGTCCCAGCAGGGGCGGCAGGAGAGAGAGGCTGG...TCTACAGAACAGCTGCTGGTGCTTCAGGGAGGCGCCGTGCCCTCCGCTTTCTTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294309.8
ENST00000542467.1
ENST00000635811.1
CDS-3UTR GCA 90 bp GGCGTGCTTCAGGTGACAACAAGGCTTTCCACACACTGCTCGCTCGCCCCACCTAGGCACCACGGAAGCTaGAGGGGACAGGGGAGGCCG +
Preference number: 4 (lower is better)
Translates to: GVLQVTTRLSTHCSLAPPRHHGS*RGQGRP
Trigger: CGGCCTCCCCTGTCCCCTGCAGCTTCCGTGGTGCCT...AGGTGGGGCGAGCGAGCAGTGTGTGGAAAGCCTTGTTGTCACCTGAAGCACGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000294309.8
CDS-3UTR GCA 90 bp TCCTGCCTGGCTGGCCACAGCATGGCCGCCTCTTCCATGACGGGCACCTGTGTAAGGCTTTCCACACACTaGTCGCTCGCCCCACCTCCC +
Preference number: 4 (lower is better)
Translates to: SCLAGHSMAASSMTGTCVRLSTH*SLAPPP
Trigger: GGGAGGTGGGGCGAGCGAGCAGTGTGTGGAAAGCCT...TACACAGGTGCCCGTCATGGAAGAGGCGGCCATGCTGTGGCCAGCCAGGCAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294309.8
CDS-3UTR GCA 90 bp GAGCTCCCGGGTGCAGCAATCTGCAACAGCCAGGAGCACGCCTCGCACCCACATGGCGAGAATGCACAGTaGAGGGGCAACCCTGGCAGG +
Preference number: 4 (lower is better)
Translates to: ELPGAAICNSQEHASHPHGENAQ*RGNPGR
Trigger: CCTGCCAGGGTTGCCCCTGCACTGTGCATTCTCGCC...ATGTGGGTGCGAGGCGTGCTCCTGGCTGTTGCAGATTGCTGCACCCGGGAGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294309.8
CDS-3UTR GCA 90 bp GGTTCCTGTCCCCAGCTTAGTGGTCCGTCAGAGGAAAGGTCTCTTCCTGCCTGGCAGCCCCACTCTGGCTaGCACCCGCCCGGCTCCAGA +
Preference number: 4 (lower is better)
Translates to: GSCPQLSGPSEERSLPAWQPHSG*HPPGSR
Trigger: TCTGGAGCCGGGCGGGTGGCAGCCAGAGTGGGGCTG...CCAGGCAGGAAGAGACCTTTCCTCTGACGGACCACTAAGCTGGGGACAGGAACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635811.1
CDS-3UTR GCA 90 bp TGGCCACAGCATGGCCGCCTCTTCCATGACGGGCACCTGTGTAGGCCAGCCTCTTCCCACTGGCCGCCCTaGACAAACAGCCCCACTCTG +
Preference number: 4 (lower is better)
Translates to: WPQHGRLFHDGHLCRPASSHWPP*TNSPTL
Trigger: CAGAGTGGGGCTGTTTGTGCAGGGCGGCCAGTGGGA...AGAGGCTGGCCTACACAGGTGCCCGTCATGGAAGAGGCGGCCATGCTGTGGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635811.1
CDS-3UTR GCA 90 bp AGCCCGCCACGGACTAGACATGTTGGGCTACACGGGCCCTGCACCAGGGCAGTCCTGAGGCCAAGAGCCTaGTCTGACCCCTTGTCACCC +
Preference number: 4 (lower is better)
Translates to: SPPRTRHVGLHGPCTRAVLRPRA*SDPLSP
Trigger: GGGTGACAAGGGGTCAGAGCAGGCTCTTGGCCTCAG...GACTGCCCTGGTGCAGGGCCCGTGTAGCCCAACATGTCTAGTCCGTGGCGGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000635811.1
ENST00000637342.1
ENST00000637504.1
CDS-3UTR CCA 90 bp AGTAAGAGCCCGCCACGGACTAGACATGTTGGGCTACACGGGCCCTGCACCAGGCAGCAGCCCACGCGCTaGACCCGACCCTCAGAAGCT +
Preference number: 4 (lower is better)
Translates to: SKSPPRTRHVGLHGPCTRQQPTR*TRPSEA
Trigger: AGCTTCTGAGGGTCGGGTCCAGCGCGTGGGCTGCTG...CCTGGTGCAGGGCCCGTGTAGCCCAACATGTCTAGTCCGTGGCGGGCTCTTACT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635811.1
ENST00000637504.1
CDS-3UTR CCA 90 bp CCACAGCATGGCCGCCTCTTCCATGACGGGCACCTGTGTAGGCCAGCCTCTCTCTGCAGAAACGGAGACTaGTACTCGGGCCTCGGCGGG +
Preference number: 4 (lower is better)
Translates to: PQHGRLFHDGHLCRPASLCRNGD*YSGLGG
Trigger: CCCGCCGAGGCCCGAGTACCAGTCTCCGTTTCTGCA...GAGAGAGGCTGGCCTACACAGGTGCCCGTCATGGAAGAGGCGGCCATGCTGTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294309.8
ENST00000542467.1
ENST00000635811.1
CDS-3UTR CCA 90 bp AAAGGTCTCTTCCTGCCTGGCTGGCCACAGCATGGCCGCCTCTTCCATGACGGGGGCCCAGGACGGTACTaGCCACCACGGCCATCAGCT +
Preference number: 4 (lower is better)
Translates to: KGLFLPGWPQHGRLFHDGGPGRY*PPRPSA
Trigger: AGCTGATGGCCGTGGTGGCCAGTACCGTCCTGGGCC...CCCGTCATGGAAGAGGCGGCCATGCTGTGGCCAGCCAGGCAGGAAGAGACCTTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294309.8
ENST00000635811.1
CDS-3UTR CCA 90 bp GAAAGCGGAGGGCACGGCGCCTCCCTGAAGCACCAGCAGCTGTTCTGTAGATGGCTGGTAGGTGGCCTCTaGGGTCCCAGCAAGGGGCTG +
Preference number: 4 (lower is better)
Translates to: ESGGHGASLKHQQLFCRWLVGGL*GPSKGL
Trigger: CAGCCCCTTGCTGGGACCCCAGAGGCCACCTACCAG...CCATCTACAGAACAGCTGCTGGTGCTTCAGGGAGGCGCCGTGCCCTCCGCTTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294309.8
ENST00000542467.1
ENST00000635811.1
CDS-3UTR CCA 90 bp TCCTGCCTGGCTGGCCACAGCATGGCCGCCTCTTCCATGACGGGCACCTGTGTAAGGTCTCTTCCTGCCTaGCTGGCCACAGCATGGCCG +
Preference number: 4 (lower is better)
Translates to: SCLAGHSMAASSMTGTCVRSLPA*LATAWP
Trigger: CGGCCATGCTGTGGCCAGCCAGGCAGGAAGAGACCT...TACACAGGTGCCCGTCATGGAAGAGGCGGCCATGCTGTGGCCAGCCAGGCAGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294309.8
ENST00000542467.1
ENST00000635811.1
CDS-3UTR TCA 90 bp CTCTTCCTGCCTGGCTGGCCACAGCATGGCCGCCTCTTCCATGACGGGCACCTGCGCCGTGCTGGTGAGTaGGGATGGGGTCTCGATAAA +
Preference number: 4 (lower is better)
Translates to: LFLPGWPQHGRLFHDGHLRRAGE*GWGLDK
Trigger: TTTATCGAGACCCCATCCTCACTCACCAGCACGGCG...CAGGTGCCCGTCATGGAAGAGGCGGCCATGCTGTGGCCAGCCAGGCAGGAAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294309.8
ENST00000542467.1
ENST00000635811.1
CDS-3UTR TCA 90 bp AGAGCCCGCCACGGACTAGACATGTTGGGCTACACGGGCCCTGCACCAGGGCAGCGCCGTGCTGGTGAGTaGGGATGGGGTCTCGATAAA +
Preference number: 4 (lower is better)
Translates to: RARHGLDMLGYTGPAPGQRRAGE*GWGLDK
Trigger: TTTATCGAGACCCCATCCTCACTCACCAGCACGGCG...CTGCCCTGGTGCAGGGCCCGTGTAGCCCAACATGTCTAGTCCGTGGCGGGCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000635811.1
ENST00000637342.1
ENST00000637504.1
CDS-3UTR TCA 90 bp AGCACAAAAACTCCCTCGATGACAGGGCCTCAGCAGGCCCCAGCCTTGACCCTGCGTCCGCCGTGCTGGTaGGTGAGGATGGGGTCTCGA +
Preference number: 4 (lower is better)
Translates to: STKTPSMTGPQQAPALTLRPPCW*VRMGSR
Trigger: TCGAGACCCCATCCTCACTCACCAGCACGGCGGACG...CAGGGTCAAGGCTGGGGCCTGCTGAGGCCCTGTCATCGAGGGAGTTTTTGTGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000635811.1
ENST00000637342.1
ENST00000637504.1
CDS-3UTR TCA 90 bp TCCTGCCTGGCTGGCCACAGCATGGCCGCCTCTTCCATGACGGGCACCTGTGTAATCCGCAGGGGCTCATaGCACACGAGACTCAGGGAC +
Preference number: 4 (lower is better)
Translates to: SCLAGHSMAASSMTGTCVIRRGS*HTRLRD
Trigger: GTCCCTGAGTCTCGTGTGTCATGAGCCCCTGCGGAT...TACACAGGTGCCCGTCATGGAAGAGGCGGCCATGCTGTGGCCAGCCAGGCAGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294309.8
ENST00000542467.1
ENST00000635811.1
CDS-3UTR TCA 90 bp TTCCTGCCTGGCTGGCCACAGCATGGCCGCCTCTTCCATGACGGGCACCTGTGTATCCGCAGGGGCTCATaGCACACGAGACTCAGGGAC +
Preference number: 4 (lower is better)
Translates to: FLPGWPQHGRLFHDGHLCIRRGS*HTRLRD
Trigger: GTCCCTGAGTCTCGTGTGTCATGAGCCCCTGCGGAT...ACACAGGTGCCCGTCATGGAAGAGGCGGCCATGCTGTGGCCAGCCAGGCAGGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294309.8
ENST00000542467.1
ENST00000635811.1
CDS-3UTR TCA 90 bp GAAAGCGGAGGGCACGGCGCCTCCCTGAAGCACCAGCAGCTGTTCTGTAGATGGTTCACCCCAACTGCCTaGGGGAAGGCTCCTCCCTCC +
Preference number: 4 (lower is better)
Translates to: ESGGHGASLKHQQLFCRWFTPTA*GKAPPS
Trigger: GGAGGGAGGAGCCTTCCCTCAGGCAGTTGGGGTGAA...CCATCTACAGAACAGCTGCTGGTGCTTCAGGGAGGCGCCGTGCCCTCCGCTTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000294309.8
ENST00000542467.1
ENST00000635811.1
CDS-3UTR TCA 90 bp AAAGGTCTCTTCCTGCCTGGCTGGCCACAGCATGGCCGCCTCTTCCATGACGGGTTCACCCCAACTGCCTaGGGGAAGGCTCCTCCCTCC +
Preference number: 4 (lower is better)
Translates to: KGLFLPGWPQHGRLFHDGFTPTA*GKAPPS
Trigger: GGAGGGAGGAGCCTTCCCTCAGGCAGTTGGGGTGAA...CCCGTCATGGAAGAGGCGGCCATGCTGTGGCCAGCCAGGCAGGAAGAGACCTTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000294309.8
ENST00000542467.1
ENST00000635811.1
CDS-3UTR TCA 90 bp AGAGCCCGCCACGGACTAGACATGTTGGGCTACACGGGCCCTGCACCAGGGCAGGGAAGCGGAACACGATaGGCATGTTCAGCATGCGGG +
Preference number: 4 (lower is better)
Translates to: RARHGLDMLGYTGPAPGQGSGTR*ACSACG
Trigger: CCCGCATGCTGAACATGCTCATCGTGTTCCGCTTCC...CTGCCCTGGTGCAGGGCCCGTGTAGCCCAACATGTCTAGTCCGTGGCGGGCTCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000635811.1
ENST00000637342.1
ENST00000637504.1
CDS-3UTR TCA 90 bp CTAAGAGCTCCCGGGTGCAGCAATCTGCAACAGCCAGGAGCACGCCTCGCACCCCTTGGACCACGGGCCTaGGTAGCGCCGATATGCATC +
Preference number: 4 (lower is better)
Translates to: LRAPGCSNLQQPGARLAPLGPRA*VAPICI
Trigger: GATGCATATCGGCGCTACTCAGGCCCGTGGTCCAAG...GGGTGCGAGGCGTGCTCCTGGCTGTTGCAGATTGCTGCACCCGGGAGCTCTTAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294309.8
CDS-3UTR TCA 90 bp CTCTTCCTGCCTGGCTGGCCACAGCATGGCCGCCTCTTCCATGACGGGCACCTGAATGCCCCGGAAGTCTaGCGGTTAACCTGTGCAGGC +
Preference number: 4 (lower is better)
Translates to: LFLPGWPQHGRLFHDGHLNAPEV*RLTCAG
Trigger: GCCTGCACAGGTTAACCGTCAGACTTCCGGGGCATT...CAGGTGCCCGTCATGGAAGAGGCGGCCATGCTGTGGCCAGCCAGGCAGGAAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294309.8
ENST00000635811.1
CDS-3UTR TCA 90 bp GAGCTCCCGGGTGCAGCAATCTGCAACAGCCAGGAGCACGCCTCGCACCCACATAAAGCCCCAGTCGGATaGGCAGGGCATCTCTGTGGG +
Preference number: 4 (lower is better)
Translates to: ELPGAAICNSQEHASHPHKAPVG*AGHLCG
Trigger: CCCACAGAGATGCCCTGCTCATCCGACTGGGGCTTT...ATGTGGGTGCGAGGCGTGCTCCTGGCTGTTGCAGATTGCTGCACCCGGGAGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294309.8
CDS-3UTR TCA 90 bp CCTGGCTGGCCACAGCATGGCCGCCTCTTCCATGACGGGCACCTGTGTAGGCCACGGGGGTCCCACTTGTaGAGGAAGTTCAGCAGGACA +
Preference number: 4 (lower is better)
Translates to: PGWPQHGRLFHDGHLCRPRGSHL*RKFSRT
Trigger: TGTCCTGCTGAACTTCCTTCACAAGTGGGACCCCCG...TGGCCTACACAGGTGCCCGTCATGGAAGAGGCGGCCATGCTGTGGCCAGCCAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000542467.1
CDS-3UTR GCA 90 bp TCCTGCCTGGCTGGCCACAGCATGGCCGCCTCTTCCATGACGGGCACCTGTGTACAGGGCCGACTTGGATaGTGCGGTAAGTGGTCAGCC +
Preference number: 4 (lower is better)
Translates to: SCLAGHSMAASSMTGTCVQGRLG*CGKWSA
Trigger: GGCTGACCACTTACCGCAGCATCCAAGTCGGCCCTG...TACACAGGTGCCCGTCATGGAAGAGGCGGCCATGCTGTGGCCAGCCAGGCAGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294309.8
ENST00000542467.1
ENST00000635811.1
CDS-3UTR GCA 90 bp CTAAGAGCTCCCGGGTGCAGCAATCTGCAACAGCCAGGAGCACGCCTCGCACCCTGGCAGGGGCCAGGCTaGTGTTTCCAGGAAGAGCCA +
Preference number: 4 (lower is better)
Translates to: LRAPGCSNLQQPGARLAPWQGPG*CFQEEP
Trigger: TGGCTCTTCCTGGAAACAGCAGCCTGGCCCCTGCCA...GGGTGCGAGGCGTGCTCCTGGCTGTTGCAGATTGCTGCACCCGGGAGCTCTTAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294309.8
CDS-3UTR GCA 90 bp AGAAGAAGGGGCTCCCACGGGCCAAACAAGCAGGACCTGAGCCTGAGAGTAAATCTCTCCTGCCGCCCCTaGTGGGACGGCAGCCCGGAC +
Preference number: 4 (lower is better)
Translates to: RRRGSHGPNKQDLSLRVNLSCRP*WDGSPD
Trigger: GTCCGGGCTGCCGTCCCAGCAGGGGCGGCAGGAGAG...ATTTACTCTCAGGCTCAGGTCCTGCTTGTTTGGCCCGTGGGAGCCCCTTCTTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294309.8
CDS-3UTR GCA 90 bp ACTGAAGCAGCTATAAAAGAAAGCGGAGGGCACGGCGCCTCCCTGAAGCACCAGCCAGCCTCTCTCTCCTaGCGCCCCTGCTGGGACGGC +
Preference number: 4 (lower is better)
Translates to: TEAAIKESGGHGASLKHQPASLS*RPCWDG
Trigger: GCCGTCCCAGCAGGGGCGGCAGGAGAGAGAGGCTGG...CTGGTGCTTCAGGGAGGCGCCGTGCCCTCCGCTTTCTTTTATAGCTGCTTCAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000294309.8
ENST00000542467.1
ENST00000635811.1
CDS-3UTR CCA 90 bp GGTTCCTGTCCCCAGCTTAGTGGTCCGTCAGAGGAAAGGTCTCTTCCTGCCTGGGCAGCAGCCCGACGCTaGCCATTTCCGGCAGCGACC +
Preference number: 4 (lower is better)
Translates to: GSCPQLSGPSEERSLPAWAAARR*PFPAAT
Trigger: GGTCGCTGCCGGAAATGGCCAGCGTCGGGCTGCTGC...CCAGGCAGGAAGAGACCTTTCCTCTGACGGACCACTAAGCTGGGGACAGGAACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294309.8
ENST00000542467.1
ENST00000635811.1
CDS-3UTR CCA 90 bp CCCCAGCTTAGTGGTCCGTCAGAGGAAAGGTCTCTTCCTGCCTGGCTGGCCACAAGAGGCACAGGTGGATaGCCAGCAGCAGCCCGACGC +
Preference number: 4 (lower is better)
Translates to: PQLSGPSEERSLPAWLATRGTGG*PAAARR
Trigger: GCGTCGGGCTGCTGCTGGCCATCCACCTGTGCCTCT...TGTGGCCAGCCAGGCAGGAAGAGACCTTTCCTCTGACGGACCACTAAGCTGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294309.8
ENST00000542467.1
ENST00000635811.1
CDS-3UTR CCA 90 bp AGCACAAAAACTCCCTCGATGACAGGGCCTCAGCAGGCCCCAGCCTTGACCCTGGGCCCAGGACGGTACTaGCCACCACGGCCATCAGCT +
Preference number: 4 (lower is better)
Translates to: STKTPSMTGPQQAPALTLGPGRY*PPRPSA
Trigger: AGCTGATGGCCGTGGTGGCCAGTACCGTCCTGGGCC...CAGGGTCAAGGCTGGGGCCTGCTGAGGCCCTGTCATCGAGGGAGTTTTTGTGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000635811.1
ENST00000637342.1
ENST00000637504.1
CDS-3UTR CCA 90 bp AAAGGTCTCTTCCTGCCTGGCTGGCCACAGCATGGCCGCCTCTTCCATGACGGGAGGTCTCTTCCTGCCTaGCTGGCCACAGCATGGCCG +
Preference number: 4 (lower is better)
Translates to: KGLFLPGWPQHGRLFHDGRSLPA*LATAWP
Trigger: CGGCCATGCTGTGGCCAGCCAGGCAGGAAGAGACCT...CCCGTCATGGAAGAGGCGGCCATGCTGTGGCCAGCCAGGCAGGAAGAGACCTTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294309.8
ENST00000542467.1
ENST00000635811.1
CDS-3UTR CCA 90 bp CCTCCTGGAGGCCCCTCATCCCCAGTAAGAGCCCGCCACGGACTAGACATGTTGAACCTGTGCAGGCCCTaGTCAGGCCTGTGGTCCCCA +
Preference number: 4 (lower is better)
Translates to: PPGGPSSPVRARHGLDMLNLCRP*SGLWSP
Trigger: TGGGGACCACAGGCCTGACCAGGGCCTGCACAGGTT...CAACATGTCTAGTCCGTGGCGGGCTCTTACTGGGGATGAGGGGCCTCCAGGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000635811.1
CDS-3UTR TCA 90 bp GTCTCTTCCTGCCTGGCTGGCCACAGCATGGCCGCCTCTTCCATGACGGGCACCGCATTCCGAACATGGTaGAGAGGCACAGGTGGATGG +
Preference number: 4 (lower is better)
Translates to: VSSCLAGHSMAASSMTGTAFRTW*RGTGGW
Trigger: CCATCCACCTGTGCCTCTTCACCATGTTCGGAATGC...GGTGCCCGTCATGGAAGAGGCGGCCATGCTGTGGCCAGCCAGGCAGGAAGAGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294309.8
ENST00000542467.1
ENST00000635811.1
CDS-3UTR TCA 90 bp AGCACAAAAACTCCCTCGATGACAGGGCCTCAGCAGGCCCCAGCCTTGACCCTGTTCACCCCAACTGCCTaGGGGAAGGCTCCTCCCTCC +
Preference number: 4 (lower is better)
Translates to: STKTPSMTGPQQAPALTLFTPTA*GKAPPS
Trigger: GGAGGGAGGAGCCTTCCCTCAGGCAGTTGGGGTGAA...CAGGGTCAAGGCTGGGGCCTGCTGAGGCCCTGTCATCGAGGGAGTTTTTGTGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000635811.1
ENST00000637342.1
ENST00000637504.1
CDS-3UTR TCA 90 bp AGCCCGCCACGGACTAGACATGTTGGGCTACACGGGCCCTGCACCAGGGCAGTCTCCAGCTGGACCTTCTaGAGCACCTGCAGCAAGTTC +
Preference number: 4 (lower is better)
Translates to: SPPRTRHVGLHGPCTRAVSSWTF*STCSKF
Trigger: GAACTTGCTGCAGGTGCTTCAGAAGGTCCAGCTGGA...GACTGCCCTGGTGCAGGGCCCGTGTAGCCCAACATGTCTAGTCCGTGGCGGGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000635811.1
ENST00000637342.1
ENST00000637504.1
CDS-3UTR TCA 90 bp CCACAGCATGGCCGCCTCTTCCATGACGGGCACCTGTGTAGGCCAGCCTCTCTCGGTTTGCCAGGGCGATaGGGTTCCCCAGGTAGTCAA +
Preference number: 4 (lower is better)
Translates to: PQHGRLFHDGHLCRPASLGLPGR*GSPGSQ
Trigger: TTGACTACCTGGGGAACCTCATCGCCCTGGCAAACC...GAGAGAGGCTGGCCTACACAGGTGCCCGTCATGGAAGAGGCGGCCATGCTGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294309.8
ENST00000542467.1
ENST00000635811.1
CDS-3UTR TCA 90 bp TCCTGCCTGGCTGGCCACAGCATGGCCGCCTCTTCCATGACGGGCACCTGTGTAGGTTTGCCAGGGCGATaGGGTTCCCCAGGTAGTCAA +
Preference number: 4 (lower is better)
Translates to: SCLAGHSMAASSMTGTCVGLPGR*GSPGSQ
Trigger: TTGACTACCTGGGGAACCTCATCGCCCTGGCAAACC...TACACAGGTGCCCGTCATGGAAGAGGCGGCCATGCTGTGGCCAGCCAGGCAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294309.8
ENST00000542467.1
ENST00000635811.1
CDS-3UTR TCA 90 bp CCTGGCTGGCCACAGCATGGCCGCCTCTTCCATGACGGGCACCTGTGTAGGCCAGCTTCATGCTGGGGATaGTACGCAGGAAGCGGAACA +
Preference number: 4 (lower is better)
Translates to: PGWPQHGRLFHDGHLCRPASCWG*YAGSGT
Trigger: TGTTCCGCTTCCTGCGTATCATCCCCAGCATGAAGC...TGGCCTACACAGGTGCCCGTCATGGAAGAGGCGGCCATGCTGTGGCCAGCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294309.8
ENST00000635811.1
CDS-3UTR TCA 90 bp AAAGAAAGCGGAGGGCACGGCGCCTCCCTGAAGCACCAGCAGCTGTTCTGTAGAGCTCGGTGTGGAGTGTaGTGGGGAGTGGTGTCCCCG +
Preference number: 4 (lower is better)
Translates to: KESGGHGASLKHQQLFCRARCGV*WGVVSP
Trigger: CGGGGACACCACTCCCCATCACACTCCACACCGAGC...TCTACAGAACAGCTGCTGGTGCTTCAGGGAGGCGCCGTGCCCTCCGCTTTCTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294309.8
CDS-3UTR TCA 90 bp AGCCCGCCACGGACTAGACATGTTGGGCTACACGGGCCCTGCACCAGGGCAGTCAGCATCGTGAGGAGTTaGTGCTGTTCTGGGGACTCC +
Preference number: 4 (lower is better)
Translates to: SPPRTRHVGLHGPCTRAVSIVRS*CCSGDS
Trigger: GGAGTCCCCAGAACAGCATCAACTCCTCACGATGCT...GACTGCCCTGGTGCAGGGCCCGTGTAGCCCAACATGTCTAGTCCGTGGCGGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000635811.1
ENST00000637342.1
ENST00000637504.1
CDS-3UTR GCA 90 bp CCTGGCTGGCCACAGCATGGCCGCCTCTTCCATGACGGGCACCTGTGTAGGCCAAGCAGGCAGCACATCTaGATCCAGCACCAGGAACAC +
Preference number: 4 (lower is better)
Translates to: PGWPQHGRLFHDGHLCRPSRQHI*IQHQEH
Trigger: GTGTTCCTGGTGCTGGATGCAGATGTGCTGCCTGCT...TGGCCTACACAGGTGCCCGTCATGGAAGAGGCGGCCATGCTGTGGCCAGCCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294309.8
ENST00000542467.1
ENST00000635811.1
CDS-3UTR GCA 90 bp GAAAGCGGAGGGCACGGCGCCTCCCTGAAGCACCAGCAGCTGTTCTGTAGATGGTGGCAGGGGCCAGGCTaGTGTTTCCAGGAAGAGCCA +
Preference number: 4 (lower is better)
Translates to: ESGGHGASLKHQQLFCRWWQGPG*CFQEEP
Trigger: TGGCTCTTCCTGGAAACAGCAGCCTGGCCCCTGCCA...CCATCTACAGAACAGCTGCTGGTGCTTCAGGGAGGCGCCGTGCCCTCCGCTTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294309.8
ENST00000635811.1
CDS-3UTR GCA 90 bp AGCACAAAAACTCCCTCGATGACAGGGCCTCAGCAGGCCCCAGCCTTGACCCTGAGCCACAGGTGCGGGTaGTGGCTCAGCCTCTCTGTG +
Preference number: 4 (lower is better)
Translates to: STKTPSMTGPQQAPALTLSHRCG*WLSLSV
Trigger: CACAGAGAGGCTGAGCCAGCACCCGCACCTGTGGCT...CAGGGTCAAGGCTGGGGCCTGCTGAGGCCCTGTCATCGAGGGAGTTTTTGTGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000635811.1
CDS-3UTR GCA 90 bp TCCTGTCCCCAGCTTAGTGGTCCGTCAGAGGAAAGGTCTCTTCCTGCCTGGCTGAGCCCGGACGTCACCTaGACAGCCACAGGTGCGGGT +
Preference number: 4 (lower is better)
Translates to: SCPQLSGPSEERSLPAWLSPDVT*TATGAG
Trigger: ACCCGCACCTGTGGCTGTGCAGGTGACGTCCGGGCT...CAGCCAGGCAGGAAGAGACCTTTCCTCTGACGGACCACTAAGCTGGGGACAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294309.8
ENST00000542467.1
ENST00000635811.1
CDS-3UTR GCA 90 bp GAGTCTGTCCACCACCGTCAGGAGCATCGTGAGGAGTTGATGCTGTTCTGGGGAAGGCACCACGGAAGCTaGAGGGGACAGGGGAGGCCG +
Preference number: 4 (lower is better)
Translates to: ESVHHRQEHREELMLFWGRHHGS*RGQGRP
Trigger: CGGCCTCCCCTGTCCCCTGCAGCTTCCGTGGTGCCT...TCCCCAGAACAGCATCAACTCCTCACGATGCTCCTGACGGTGGTGGACAGACTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000635811.1
CDS-3UTR GCA 90 bp TCCTGTCCCCAGCTTAGTGGTCCGTCAGAGGAAAGGTCTCTTCCTGCCTGGCTGGTGGTCCCCAAGGGCTaGCGGCAGCAAAGGCACCAC +
Preference number: 4 (lower is better)
Translates to: SCPQLSGPSEERSLPAWLVVPKG*RQQRHH
Trigger: GTGGTGCCTTTGCTGCCGGCAGCCCTTGGGGACCAC...CAGCCAGGCAGGAAGAGACCTTTCCTCTGACGGACCACTAAGCTGGGGACAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294309.8
ENST00000635811.1
CDS-3UTR GCA 90 bp GAAAGCGGAGGGCACGGCGCCTCCCTGAAGCACCAGCAGCTGTTCTGTAGATGGCCAAAGCACAGAGGGTaGAGGGCCAGAACGGCAACC +
Preference number: 4 (lower is better)
Translates to: ESGGHGASLKHQQLFCRWPKHRG*RARTAT
Trigger: GGTTGCCGTTCTGGCCCTGCACCCTCTGTGCTTTGG...CCATCTACAGAACAGCTGCTGGTGCTTCAGGGAGGCGCCGTGCCCTCCGCTTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294309.8
CDS-3UTR CCA 90 bp GGTTCCTGTCCCCAGCTTAGTGGTCCGTCAGAGGAAAGGTCTCTTCCTGCCTGGCAGCAGCCCACGCGCTaGACCCGACCCTCAGAAGCT +
Preference number: 4 (lower is better)
Translates to: GSCPQLSGPSEERSLPAWQQPTR*TRPSEA
Trigger: AGCTTCTGAGGGTCGGGTCCAGCGCGTGGGCTGCTG...CCAGGCAGGAAGAGACCTTTCCTCTGACGGACCACTAAGCTGGGGACAGGAACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294309.8
ENST00000542467.1
ENST00000635811.1
CDS-3UTR CCA 90 bp GAGCTCCCGGGTGCAGCAATCTGCAACAGCCAGGAGCACGCCTCGCACCCACATTCACATCGGGGTTGTTaGCCGTGGTCAGCAGCACCA +
Preference number: 4 (lower is better)
Translates to: ELPGAAICNSQEHASHPHSHRGC*PWSAAP
Trigger: TGGTGCTGCTGACCACGGCCAACAACCCCGATGTGA...ATGTGGGTGCGAGGCGTGCTCCTGGCTGTTGCAGATTGCTGCACCCGGGAGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294309.8
CDS-3UTR CCA 90 bp AAGGTCTCTTCCTGCCTGGCTGGCCACAGCATGGCCGCCTCTTCCATGACGGGCACCTGCAGCAAGTTCTaGGGCTTCACCCCAACTGCC +
Preference number: 4 (lower is better)
Translates to: KVSSCLAGHSMAASSMTGTCSKF*GFTPTA
Trigger: GGCAGTTGGGGTGAAGCCCCAGAACTTGCTGCAGGT...GCCCGTCATGGAAGAGGCGGCCATGCTGTGGCCAGCCAGGCAGGAAGAGACCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294309.8
ENST00000542467.1
ENST00000635811.1
CDS-3UTR CCA 90 bp GTCTCTTCCTGCCTGGCTGGCCACAGCATGGCCGCCTCTTCCATGACGGGCACCCCAGGAACACGCAAATaGACACCAGGTTTGCCAGGG +
Preference number: 4 (lower is better)
Translates to: VSSCLAGHSMAASSMTGTPGTRK*TPGLPG
Trigger: CCCTGGCAAACCTGGTGTCCATTTGCGTGTTCCTGG...GGTGCCCGTCATGGAAGAGGCGGCCATGCTGTGGCCAGCCAGGCAGGAAGAGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294309.8
ENST00000542467.1
ENST00000635811.1
CDS-3UTR CCA 90 bp CTGTCCTTTGACCTGAGGCCAAGAGCCTGCTCTGACCCCTTGTCACCCTTCCCAGGCCCAGGACGGTACTaGCCACCACGGCCATCAGCT +
Preference number: 4 (lower is better)
Translates to: LSFDLRPRACSDPLSPFPGPGRY*PPRPSA
Trigger: AGCTGATGGCCGTGGTGGCCAGTACCGTCCTGGGCC...TGGGAAGGGTGACAAGGGGTCAGAGCAGGCTCTTGGCCTCAGGTCAAAGGACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000635811.1
ENST00000637342.1
ENST00000637504.1
CDS-3UTR CCA 90 bp CCATCCCTTCCTGGTCCCGCTGAGCTCGGGCACAGACCGGGCACCAGGCTCGGTCAGCTGTTCTGTAGATaGTTGTTGGGCCACACGCAA +
Preference number: 4 (lower is better)
Translates to: PSLPGPAELGHRPGTRLGQLFCR*LLGHTQ
Trigger: TTGCGTGTGGCCCAACAACCATCTACAGAACAGCTG...ACCGAGCCTGGTGCCCGGTCTGTGCCCGAGCTCAGCGGGACCAGGAAGGGATGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294309.8
CDS-3UTR TCA 90 bp CCTCCTGGAGGCCCCTCATCCCCAGTAAGAGCCCGCCACGGACTAGACATGTTGCGCCGTGCTGGTGAGTaGGGATGGGGTCTCGATAAA +
Preference number: 4 (lower is better)
Translates to: PPGGPSSPVRARHGLDMLRRAGE*GWGLDK
Trigger: TTTATCGAGACCCCATCCTCACTCACCAGCACGGCG...CAACATGTCTAGTCCGTGGCGGGCTCTTACTGGGGATGAGGGGCCTCCAGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000635811.1
ENST00000637342.1
ENST00000637504.1
CDS-3UTR TCA 90 bp CAAACAGCCCCACTCTGGCTGCCACCCGCCCGGCTCCAGACTCCTGAATGCCCCGGAACTGACTGTAGATaGTGGCTGTCAGCAGGTTCA +
Preference number: 4 (lower is better)
Translates to: QTAPLWLPPARLQTPECPGTDCR*WLSAGS
Trigger: TGAACCTGCTGACAGCCATCATCTACAGTCAGTTCC...GGGGCATTCAGGAGTCTGGAGCCGGGCGGGTGGCAGCCAGAGTGGGGCTGTTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635811.1
CDS-3UTR TCA 90 bp CACGGACTAGACATGTTGGGCTACACGGGCCCTGCACCAGGGCAGTCATCATCTTTCACCCCAACTGCCTaGGGGAAGGCTCCTCCCTCC +
Preference number: 4 (lower is better)
Translates to: HGLDMLGYTGPAPGQSSSFTPTA*GKAPPS
Trigger: GGAGGGAGGAGCCTTCCCTCAGGCAGTTGGGGTGAA...AGATGATGACTGCCCTGGTGCAGGGCCCGTGTAGCCCAACATGTCTAGTCCGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000635811.1
ENST00000637342.1
ENST00000637504.1
CDS-3UTR TCA 90 bp TGGCCACAGCATGGCCGCCTCTTCCATGACGGGCACCTGTGTAGGCCAGCCTCTCCAGGGCAAAGACCTTaGGCAGCATCTCCAACAGGT +
Preference number: 4 (lower is better)
Translates to: WPQHGRLFHDGHLCRPASPGQRP*AASPTG
Trigger: ACCTGTTGGAGATGCTGCTCAAGGTCTTTGCCCTGG...AGAGGCTGGCCTACACAGGTGCCCGTCATGGAAGAGGCGGCCATGCTGTGGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294309.8
ENST00000542467.1
ENST00000635811.1
CDS-3UTR TCA 90 bp TCCTGCCTGGCTGGCCACAGCATGGCCGCCTCTTCCATGACGGGCACCTGTGTACCAGGGCAAAGACCTTaGGCAGCATCTCCAACAGGT +
Preference number: 4 (lower is better)
Translates to: SCLAGHSMAASSMTGTCVPGQRP*AASPTG
Trigger: ACCTGTTGGAGATGCTGCTCAAGGTCTTTGCCCTGG...TACACAGGTGCCCGTCATGGAAGAGGCGGCCATGCTGTGGCCAGCCAGGCAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294309.8
ENST00000542467.1
ENST00000635811.1
CDS-3UTR TCA 90 bp TGGCCACAGCATGGCCGCCTCTTCCATGACGGGCACCTGTGTAGGCCAGCCTCTTCAAGTTCCACAGAGTaGCCAGGGCAGCCGCAAAGT +
Preference number: 4 (lower is better)
Translates to: WPQHGRLFHDGHLCRPASSSSTE*PGQPQS
Trigger: ACTTTGCGGCTGCCCTGGTCACTCTGTGGAACTTGA...AGAGGCTGGCCTACACAGGTGCCCGTCATGGAAGAGGCGGCCATGCTGTGGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294309.8
ENST00000635811.1
CDS-3UTR TCA 90 bp ATGCGGGTTGGACGCCGTCCCAAAGCACAGAGGGTGCAGGGCCAGAACGGCAACCTGGCGTGCTTCAGGTaGCAACAAGGCTTTCCACAC +
Preference number: 4 (lower is better)
Translates to: MRVGRRPKAQRVQGQNGNLACFR*QQGFPH
Trigger: GTGTGGAAAGCCTTGTTGTCACCTGAAGCACGCCAG...GTTGCCGTTCTGGCCCTGCACCCTCTGTGCTTTGGGACGGCGTCCAACCCGCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294309.8
CDS-3UTR TCA 90 bp TTCCTGCCTGGCTGGCCACAGCATGGCCGCCTCTTCCATGACGGGCACCTGTGTGCGTGGGTTGGCCCCTaGAGTGAGAAAACCATTGGT +
Preference number: 4 (lower is better)
Translates to: FLPGWPQHGRLFHDGHLCAWVGP*SEKTIG
Trigger: ACCAATGGTTTTCTCACTTCAGGGGCCAACCCACGC...ACACAGGTGCCCGTCATGGAAGAGGCGGCCATGCTGTGGCCAGCCAGGCAGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294309.8
CDS-3UTR GCA 90 bp AGGGGTACACAGTGTGGGAGTCAAAGCCCCAGTCGGATGAGCAGGGCATCTCTGGGGCTTCACCCCAACTaGCTGAGGGAAGGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: RGTQCGSQSPSRMSRASLGLHPN*LREGSS
Trigger: GGAGGAGCCTTCCCTCAGGCAGTTGGGGTGAAGCCC...CAGAGATGCCCTGCTCATCCGACTGGGGCTTTGACTCCCACACTGTGTACCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000294309.8
CDS-3UTR GCA 90 bp AAAGAAAGCGGAGGGCACGGCGCCTCCCTGAAGCACCAGCAGCTGTTCTGTAGAGGGCTTCACCCCAACTaGCTGAGGGAAGGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: KESGGHGASLKHQQLFCRGLHPN*LREGSS
Trigger: GGAGGAGCCTTCCCTCAGGCAGTTGGGGTGAAGCCC...TCTACAGAACAGCTGCTGGTGCTTCAGGGAGGCGCCGTGCCCTCCGCTTTCTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294309.8
ENST00000542467.1
ENST00000635811.1
CDS-3UTR GCA 90 bp TGGCCACAGCATGGCCGCCTCTTCCATGACGGGCACCTGTGTAGGCCAGCCTCTAATGGACACCAGGTTTaGCAGGGCGATGAGGTTCCC +
Preference number: 4 (lower is better)
Translates to: WPQHGRLFHDGHLCRPASNGHQV*QGDEVP
Trigger: GGGAACCTCATCGCCCTGGCAAACCTGGTGTCCATT...AGAGGCTGGCCTACACAGGTGCCCGTCATGGAAGAGGCGGCCATGCTGTGGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294309.8
ENST00000542467.1
ENST00000635811.1
CDS-3UTR GCA 90 bp TCCTGCCTGGCTGGCCACAGCATGGCCGCCTCTTCCATGACGGGCACCTGTGTAAATGGACACCAGGTTTaGCAGGGCGATGAGGTTCCC +
Preference number: 4 (lower is better)
Translates to: SCLAGHSMAASSMTGTCVNGHQV*QGDEVP
Trigger: GGGAACCTCATCGCCCTGGCAAACCTGGTGTCCATT...TACACAGGTGCCCGTCATGGAAGAGGCGGCCATGCTGTGGCCAGCCAGGCAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294309.8
ENST00000542467.1
ENST00000635811.1
CDS-3UTR GCA 90 bp GAGCTCCCGGGTGCAGCAATCTGCAACAGCCAGGAGCACGCCTCGCACCCACATAGCAGGCAGCACATCTaGATCCAGCACCAGGAACAC +
Preference number: 4 (lower is better)
Translates to: ELPGAAICNSQEHASHPHSRQHI*IQHQEH
Trigger: GTGTTCCTGGTGCTGGATGCAGATGTGCTGCCTGCT...ATGTGGGTGCGAGGCGTGCTCCTGGCTGTTGCAGATTGCTGCACCCGGGAGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294309.8
CDS-3UTR GCA 90 bp GTCTCTTCCTGCCTGGCTGGCCACAGCATGGCCGCCTCTTCCATGACGGGCACCAATCTCGATACCGACTaGACTGTTGTTCGGGTCGCC +
Preference number: 4 (lower is better)
Translates to: VSSCLAGHSMAASSMTGTNLDTD*TVVRVA
Trigger: GGCGACCCGAACAACAGTGCAGTCGGTATCGAGATT...GGTGCCCGTCATGGAAGAGGCGGCCATGCTGTGGCCAGCCAGGCAGGAAGAGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294309.8
CDS-3UTR CCA 90 bp GAGTCTGTCCACCACCGTCAGGAGCATCGTGAGGAGTTGATGCTGTTCTGGGGACAGCAGCCCACGCGCTaGACCCGACCCTCAGAAGCT +
Preference number: 4 (lower is better)
Translates to: ESVHHRQEHREELMLFWGQQPTR*TRPSEA
Trigger: AGCTTCTGAGGGTCGGGTCCAGCGCGTGGGCTGCTG...TCCCCAGAACAGCATCAACTCCTCACGATGCTCCTGACGGTGGTGGACAGACTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635811.1
ENST00000637504.1
CDS-3UTR CCA 90 bp TGTTCTGTAGATGGTTGTTGGGCCACACGCAAAGGACTTGGTTCCTGTCCCCAGTGCAGAGGTCCCACCTaGCCGCGGCACCAGGGCCGA +
Preference number: 4 (lower is better)
Translates to: CSVDGCWATRKGLGSCPQCRGPT*PRHQGR
Trigger: TCGGCCCTGGTGCCGCGGCCAGGTGGGACCTCTGCA...CTGGGGACAGGAACCAAGTCCTTTGCGTGTGGCCCAACAACCATCTACAGAACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294309.8
ENST00000542467.1
ENST00000635811.1
CDS-3UTR CCA 90 bp GACGGGGATGTATGTGACTCACAACTTCATCGGGGCATGGAGAGTCTGTCCACCGCAGCAGCCCGACGCTaGCCATTTCCGGCAGCGACC +
Preference number: 4 (lower is better)
Translates to: DGDVCDSQLHRGMESLSTAAARR*PFPAAT
Trigger: GGTCGCTGCCGGAAATGGCCAGCGTCGGGCTGCTGC...GGTGGACAGACTCTCCATGCCCCGATGAAGTTGTGAGTCACATACATCCCCGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000635811.1
ENST00000637504.1
CDS-3UTR CCA 90 bp ACTGAAGCAGCTATAAAAGAAAGCGGAGGGCACGGCGCCTCCCTGAAGCACCAGCGGGGTTGTTGGCCGTaGTCAGCAGCACCAGGAGGG +
Preference number: 4 (lower is better)
Translates to: TEAAIKESGGHGASLKHQRGCWP*SAAPGG
Trigger: CCCTCCTGGTGCTGCTGACCACGGCCAACAACCCCG...CTGGTGCTTCAGGGAGGCGCCGTGCCCTCCGCTTTCTTTTATAGCTGCTTCAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000294309.8
ENST00000542467.1
ENST00000635811.1
CDS-3UTR CCA 90 bp CCTCCTGGAGGCCCCTCATCCCCAGTAAGAGCCCGCCACGGACTAGACATGTTGTCACATCGGGGTTGTTaGCCGTGGTCAGCAGCACCA +
Preference number: 4 (lower is better)
Translates to: PPGGPSSPVRARHGLDMLSHRGC*PWSAAP
Trigger: TGGTGCTGCTGACCACGGCCAACAACCCCGATGTGA...CAACATGTCTAGTCCGTGGCGGGCTCTTACTGGGGATGAGGGGCCTCCAGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000635811.1
ENST00000637342.1
ENST00000637504.1
CDS-3UTR CCA 90 bp CACGGACTAGACATGTTGGGCTACACGGGCCCTGCACCAGGGCAGTCATCATCTTGCAGAAACGGAGACTaGTACTCGGGCCTCGGCGGG +
Preference number: 4 (lower is better)
Translates to: HGLDMLGYTGPAPGQSSSCRNGD*YSGLGG
Trigger: CCCGCCGAGGCCCGAGTACCAGTCTCCGTTTCTGCA...AGATGATGACTGCCCTGGTGCAGGGCCCGTGTAGCCCAACATGTCTAGTCCGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000635811.1
ENST00000637342.1
ENST00000637504.1
CDS-3UTR CCA 90 bp TTCCTGCCTGGCTGGCCACAGCATGGCCGCCTCTTCCATGACGGGCACCTGTGTCCAGGAACACGCAAATaGACACCAGGTTTGCCAGGG +
Preference number: 4 (lower is better)
Translates to: FLPGWPQHGRLFHDGHLCPGTRK*TPGLPG
Trigger: CCCTGGCAAACCTGGTGTCCATTTGCGTGTTCCTGG...ACACAGGTGCCCGTCATGGAAGAGGCGGCCATGCTGTGGCCAGCCAGGCAGGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294309.8
ENST00000542467.1
ENST00000635811.1
CDS-3UTR CCA 90 bp CCACAGCATGGCCGCCTCTTCCATGACGGGCACCTGTGTAGGCCAGCCTCTCTCCGTCAAACACGTTGCTaGGGTAGGACAGGTACCCTC +
Preference number: 4 (lower is better)
Translates to: PQHGRLFHDGHLCRPASLRQTRC*GRTGTL
Trigger: GAGGGTACCTGTCCTACCCCAGCAACGTGTTTGACG...GAGAGAGGCTGGCCTACACAGGTGCCCGTCATGGAAGAGGCGGCCATGCTGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294309.8
ENST00000542467.1
ENST00000635811.1
CDS-3UTR CCA 90 bp TTCCTGCCTGGCTGGCCACAGCATGGCCGCCTCTTCCATGACGGGCACCTGTGTCGTCAAACACGTTGCTaGGGTAGGACAGGTACCCTC +
Preference number: 4 (lower is better)
Translates to: FLPGWPQHGRLFHDGHLCRQTRC*GRTGTL
Trigger: GAGGGTACCTGTCCTACCCCAGCAACGTGTTTGACG...ACACAGGTGCCCGTCATGGAAGAGGCGGCCATGCTGTGGCCAGCCAGGCAGGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294309.8
ENST00000542467.1
ENST00000635811.1
CDS-3UTR CCA 90 bp TCCTGTCCCCAGCTTAGTGGTCCGTCAGAGGAAAGGTCTCTTCCTGCCTGGCTGCACAGGTGCGGGTGCTaGCTCAGCCTCTCTGTGAGC +
Preference number: 4 (lower is better)
Translates to: SCPQLSGPSEERSLPAWLHRCGC*LSLSVS
Trigger: GCTCACAGAGAGGCTGAGCCAGCACCCGCACCTGTG...CAGCCAGGCAGGAAGAGACCTTTCCTCTGACGGACCACTAAGCTGGGGACAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294309.8
ENST00000542467.1
ENST00000635811.1
CDS-3UTR CCA 90 bp ATGCGGGTTGGACGCCGTCCCAAAGCACAGAGGGTGCAGGGCCAGAACGGCAACGACATGAATGCGGGTTaGACGCCGTCCCAAAGCACA +
Preference number: 4 (lower is better)
Translates to: MRVGRRPKAQRVQGQNGNDMNAG*TPSQST
Trigger: TGTGCTTTGGGACGGCGTCCAACCCGCATTCATGTC...GTTGCCGTTCTGGCCCTGCACCCTCTGTGCTTTGGGACGGCGTCCAACCCGCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294309.8
3UTR CAA 72 bp TCATCCCCAGTAAGAGCCCGCCACGGACTAGACATGTaGGGCTACACGGGCCCTGCACCAGGGCAGTCATCA +
Preference number: 4 (lower is better)
Translates to: SSPVRARHGLDM*GYTGPAPGQSS
Trigger: TGATGACTGCCCTGGTGCAGGGCCCGTGTAGCCCAACATGTCTAGTCCGTGGCGGGCTCTTACTGGGGATGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000635811.1
ENST00000637342.1
ENST00000637504.1
CDS-3UTR TCA 90 bp ACTAGACATGTTGGGCTACACGGGCCCTGCACCAGGGCAGTCATCATCTTTACCCGTCCGCCGTGCTGGTaGGTGAGGATGGGGTCTCGA +
Preference number: 4 (lower is better)
Translates to: TRHVGLHGPCTRAVIIFTRPPCW*VRMGSR
Trigger: TCGAGACCCCATCCTCACTCACCAGCACGGCGGACG...GGTAAAGATGATGACTGCCCTGGTGCAGGGCCCGTGTAGCCCAACATGTCTAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000635811.1
ENST00000637342.1
ENST00000637504.1
CDS-3UTR TCA 90 bp AGTAAGAGCCCGCCACGGACTAGACATGTTGGGCTACACGGGCCCTGCACCAGGTCCAGCTGGACCTTCTaGAGCACCTGCAGCAAGTTC +
Preference number: 4 (lower is better)
Translates to: SKSPPRTRHVGLHGPCTRSSWTF*STCSKF
Trigger: GAACTTGCTGCAGGTGCTTCAGAAGGTCCAGCTGGA...CCTGGTGCAGGGCCCGTGTAGCCCAACATGTCTAGTCCGTGGCGGGCTCTTACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000635811.1
ENST00000637342.1
ENST00000637504.1
CDS-3UTR TCA 90 bp TCCTGCCTGGCTGGCCACAGCATGGCCGCCTCTTCCATGACGGGCACCTGTGTACGGCAACCACTCAAGTaGCTCAGAAGGAAGCTTCTC +
Preference number: 4 (lower is better)
Translates to: SCLAGHSMAASSMTGTCVRQPLK*LRRKLL
Trigger: GAGAAGCTTCCTTCTGAGTCACTTGAGTGGTTGCCG...TACACAGGTGCCCGTCATGGAAGAGGCGGCCATGCTGTGGCCAGCCAGGCAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294309.8
CDS-3UTR TCA 90 bp CTCACTGAAGCAGCTATAAAAGAAAGCGGAGGGCACGGCGCCTCCCTGAAGCACGGGCAGTGGAGAAGCTaGCCAGGGCCACCTTCACCA +
Preference number: 4 (lower is better)
Translates to: LTEAAIKESGGHGASLKHGQWRS*PGPPSP
Trigger: TGGTGAAGGTGGCCCTGGTCAGCTTCTCCACTGCCC...GTGCTTCAGGGAGGCGCCGTGCCCTCCGCTTTCTTTTATAGCTGCTTCAGTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294309.8
CDS-3UTR TCA 90 bp ATGCGGGTTGGACGCCGTCCCAAAGCACAGAGGGTGCAGGGCCAGAACGGCAACAACAGACCACAGCCCTaGATACAAGAAGGGACCAGG +
Preference number: 4 (lower is better)
Translates to: MRVGRRPKAQRVQGQNGNNRPQP*IQEGTR
Trigger: CCTGGTCCCTTCTTGTATTCAGGGCTGTGGTCTGTT...GTTGCCGTTCTGGCCCTGCACCCTCTGTGCTTTGGGACGGCGTCCAACCCGCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294309.8
CDS-3UTR TCA 90 bp AAAGGTCTCTTCCTGCCTGGCTGGCCACAGCATGGCCGCCTCTTCCATGACGGGAGCATCGTGAGGAGTTaGTGCTGTTCTGGGGACTCC +
Preference number: 4 (lower is better)
Translates to: KGLFLPGWPQHGRLFHDGSIVRS*CCSGDS
Trigger: GGAGTCCCCAGAACAGCATCAACTCCTCACGATGCT...CCCGTCATGGAAGAGGCGGCCATGCTGTGGCCAGCCAGGCAGGAAGAGACCTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635811.1
CDS-3UTR GCA 90 bp ACAGCAGAGTCAGGAGGACTCCTGTCCTTTGACCTGAGGCCAAGAGCCTGCTCTGGCCGACTTGGATGCTaGGGTAAGTGGTCAGCCCCG +
Preference number: 4 (lower is better)
Translates to: TAESGGLLSFDLRPRACSGRLGC*GKWSAP
Trigger: CGGGGCTGACCACTTACCGCAGCATCCAAGTCGGCC...AGAGCAGGCTCTTGGCCTCAGGTCAAAGGACAGGAGTCCTCCTGACTCTGCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000635811.1
ENST00000637342.1
ENST00000637504.1
CDS-3UTR GCA 90 bp GGTTCCTGTCCCCAGCTTAGTGGTCCGTCAGAGGAAAGGTCTCTTCCTGCCTGGCCACAGCCTGATCAATaGAGAGGTCCCACCTGGCCG +
Preference number: 4 (lower is better)
Translates to: GSCPQLSGPSEERSLPAWPQPDQ*RGPTWP
Trigger: CGGCCAGGTGGGACCTCTGCATTGATCAGGCTGTGG...CCAGGCAGGAAGAGACCTTTCCTCTGACGGACCACTAAGCTGGGGACAGGAACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294309.8
ENST00000542467.1
ENST00000635811.1
CDS-3UTR GCA 90 bp CTCTTCCTGCCTGGCTGGCCACAGCATGGCCGCCTCTTCCATGACGGGCACCTGGCAGCGACCAGCGGATaGATTTCAAGGTCTTCTTCA +
Preference number: 4 (lower is better)
Translates to: LFLPGWPQHGRLFHDGHLAATSG*ISRSSS
Trigger: TGAAGAAGACCTTGAAATGCATCCGCTGGTCGCTGC...CAGGTGCCCGTCATGGAAGAGGCGGCCATGCTGTGGCCAGCCAGGCAGGAAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294309.8
ENST00000542467.1
ENST00000635811.1
CDS-3UTR GCA 90 bp GTCTCTTCCTGCCTGGCTGGCCACAGCATGGCCGCCTCTTCCATGACGGGCACCCTGAGAGCAGAACACTaGCATAGGAACGCACCTTCT +
Preference number: 4 (lower is better)
Translates to: VSSCLAGHSMAASSMTGTLRAEH*HRNAPS
Trigger: AGAAGGTGCGTTCCTATGGCAGTGTTCTGCTCTCAG...GGTGCCCGTCATGGAAGAGGCGGCCATGCTGTGGCCAGCCAGGCAGGAAGAGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294309.8
ENST00000542467.1
ENST00000635811.1
CDS-3UTR GCA 90 bp AGAGCCCGCCACGGACTAGACATGTTGGGCTACACGGGCCCTGCACCAGGGCAGCTGAGAGCAGAACACTaGCATAGGAACGCACCTTCT +
Preference number: 4 (lower is better)
Translates to: RARHGLDMLGYTGPAPGQLRAEH*HRNAPS
Trigger: AGAAGGTGCGTTCCTATGGCAGTGTTCTGCTCTCAG...CTGCCCTGGTGCAGGGCCCGTGTAGCCCAACATGTCTAGTCCGTGGCGGGCTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000635811.1
ENST00000637342.1
ENST00000637504.1
CDS-3UTR GCA 90 bp AGAAGAAGGGGCTCCCACGGGCCAAACAAGCAGGACCTGAGCCTGAGAGTAAATAGCCCGGACGTCACCTaGACAGCCACAGGTGCGGGT +
Preference number: 4 (lower is better)
Translates to: RRRGSHGPNKQDLSLRVNSPDVT*TATGAG
Trigger: ACCCGCACCTGTGGCTGTGCAGGTGACGTCCGGGCT...ATTTACTCTCAGGCTCAGGTCCTGCTTGTTTGGCCCGTGGGAGCCCCTTCTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294309.8
CDS-3UTR GCA 90 bp GACGGGGATGTATGTGACTCACAACTTCATCGGGGCATGGAGAGTCTGTCCACCAGCCCGGACGTCACCTaGACAGCCACAGGTGCGGGT +
Preference number: 4 (lower is better)
Translates to: DGDVCDSQLHRGMESLSTSPDVT*TATGAG
Trigger: ACCCGCACCTGTGGCTGTGCAGGTGACGTCCGGGCT...GGTGGACAGACTCTCCATGCCCCGATGAAGTTGTGAGTCACATACATCCCCGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635811.1
CDS-3UTR GCA 90 bp GTTCCTGTCCCCAGCTTAGTGGTCCGTCAGAGGAAAGGTCTCTTCCTGCCTGGCCTGACGGTTAACCTGTaGAGGCCCTGGTCAGGCCTG +
Preference number: 4 (lower is better)
Translates to: VPVPSLVVRQRKGLFLPGLTVNL*RPWSGL
Trigger: CAGGCCTGACCAGGGCCTGCACAGGTTAACCGTCAG...GCCAGGCAGGAAGAGACCTTTCCTCTGACGGACCACTAAGCTGGGGACAGGAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294309.8
ENST00000635811.1
CDS-3UTR CCA 90 bp TTGTGCCACAAACATTTATGGGACCACCTACTGAGTACCGGGTGCTGTGGACGGGCAGCAGCCCGACGCTaGCCATTTCCGGCAGCGACC +
Preference number: 4 (lower is better)
Translates to: LCHKHLWDHLLSTGCCGRAAARR*PFPAAT
Trigger: GGTCGCTGCCGGAAATGGCCAGCGTCGGGCTGCTGC...CCGTCCACAGCACCCGGTACTCAGTAGGTGGTCCCATAAATGTTTGTGGCACAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000635811.1
ENST00000637342.1
ENST00000637504.1
CDS-3UTR CCA 90 bp CCCCAGCTTAGTGGTCCGTCAGAGGAAAGGTCTCTTCCTGCCTGGCTGGCCACAACCTGCAGCAAGTTCTaGGGCTTCACCCCAACTGCC +
Preference number: 4 (lower is better)
Translates to: PQLSGPSEERSLPAWLATTCSKF*GFTPTA
Trigger: GGCAGTTGGGGTGAAGCCCCAGAACTTGCTGCAGGT...TGTGGCCAGCCAGGCAGGAAGAGACCTTTCCTCTGACGGACCACTAAGCTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000294309.8
ENST00000542467.1
ENST00000635811.1
CDS-3UTR CCA 90 bp CCCCAGCTTAGTGGTCCGTCAGAGGAAAGGTCTCTTCCTGCCTGGCTGGCCACATGGCCGAAGAGGAACTaGGCGCTCTGCAGAAACGGA +
Preference number: 4 (lower is better)
Translates to: PQLSGPSEERSLPAWLATWPKRN*ALCRNG
Trigger: TCCGTTTCTGCAGAGCGCCCAGTTCCTCTTCGGCCA...TGTGGCCAGCCAGGCAGGAAGAGACCTTTCCTCTGACGGACCACTAAGCTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294309.8
ENST00000542467.1
ENST00000635811.1
CDS-3UTR CCA 90 bp TCCTGTCCCCAGCTTAGTGGTCCGTCAGAGGAAAGGTCTCTTCCTGCCTGGCTGCCTCCAGCCTGGGTGTaGCAATCGGTACACAGCCAG +
Preference number: 4 (lower is better)
Translates to: SCPQLSGPSEERSLPAWLPPAWV*QSVHSQ
Trigger: CTGGCTGTGTACCGATTGCCACACCCAGGCTGGAGG...CAGCCAGGCAGGAAGAGACCTTTCCTCTGACGGACCACTAAGCTGGGGACAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294309.8
CDS-3UTR CCA 90 bp TCCCACAGGGGCTATGGCGTGGGCTCAGCACCTCTGAAGGAAAAGCAGATGAAACTCTTCCTGCCTGGCTaGCCACAGCATGGCCGCCTC +
Preference number: 4 (lower is better)
Translates to: SHRGYGVGSAPLKEKQMKLFLPG*PQHGRL
Trigger: GAGGCGGCCATGCTGTGGCCAGCCAGGCAGGAAGAG...TTTCATCTGCTTTTCCTTCAGAGGTGCTGAGCCCACGCCATAGCCCCTGTGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294309.8
CDS-3UTR CCA 90 bp CCTGGCTGGCCACAGCATGGCCGCCTCTTCCATGACGGGCACCTGTGTAGGCCACAGCTGTTCTGTAGATaGTTGTTGGGCCACACGCAA +
Preference number: 4 (lower is better)
Translates to: PGWPQHGRLFHDGHLCRPQLFCR*LLGHTQ
Trigger: TTGCGTGTGGCCCAACAACCATCTACAGAACAGCTG...TGGCCTACACAGGTGCCCGTCATGGAAGAGGCGGCCATGCTGTGGCCAGCCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294309.8
ENST00000542467.1
ENST00000635811.1
CDS-3UTR CCA 90 bp TCCTGCCTGGCTGGCCACAGCATGGCCGCCTCTTCCATGACGGGCACCTGTGTATGGTCAATCTGGACCTaGCGTGCTTCAGGTGACAAC +
Preference number: 4 (lower is better)
Translates to: SCLAGHSMAASSMTGTCVWSIWT*RASGDN
Trigger: GTTGTCACCTGAAGCACGCCAGGTCCAGATTGACCA...TACACAGGTGCCCGTCATGGAAGAGGCGGCCATGCTGTGGCCAGCCAGGCAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294309.8
CDS-3UTR CCA 90 bp GGCTCGGTGTGGAGTGTGATGGGGAGTGGTGTCCCCGGAGTTGTTTCTGGGAGTGAGGGGTACACAGTGTaGGAGTCAAAGCCCCAGTCG +
Preference number: 4 (lower is better)
Translates to: GSVWSVMGSGVPGVVSGSEGYTV*ESKPQS
Trigger: CGACTGGGGCTTTGACTCCCACACTGTGTACCCCTC...ACTCCCAGAAACAACTCCGGGGACACCACTCCCCATCACACTCCACACCGAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000294309.8
CDS-3UTR CCA 90 bp TCCTGCCTGGCTGGCCACAGCATGGCCGCCTCTTCCATGACGGGCACCTGTGTACCTCCTCCTGGGTGCTaGGTGGATAATGTTCTTTGC +
Preference number: 4 (lower is better)
Translates to: SCLAGHSMAASSMTGTCVPPPGC*VDNVLC
Trigger: GCAAAGAACATTATCCACCCAGCACCCAGGAGGAGG...TACACAGGTGCCCGTCATGGAAGAGGCGGCCATGCTGTGGCCAGCCAGGCAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635811.1
CDS-3UTR CCA 90 bp CCTCCTGGAGGCCCCTCATCCCCAGTAAGAGCCCGCCACGGACTAGACATGTTGGAGTTGATGCTGTTCTaGGGACTCCACGTGAGAGCC +
Preference number: 4 (lower is better)
Translates to: PPGGPSSPVRARHGLDMLELMLF*GLHVRA
Trigger: GGCTCTCACGTGGAGTCCCCAGAACAGCATCAACTC...CAACATGTCTAGTCCGTGGCGGGCTCTTACTGGGGATGAGGGGCCTCCAGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000635811.1
ENST00000637342.1
ENST00000637504.1
CDS-3UTR CCA 90 bp CACAGTTGCACATGGCCAGGGAGGCCTCACAATCATGGCAGAAGGCAAAGGAGACAGGCCTGCTCCTCCTaGAGGCCCCTCATCCCCAGT +
Preference number: 4 (lower is better)
Translates to: HSCTWPGRPHNHGRRQRRQACSS*RPLIPS
Trigger: ACTGGGGATGAGGGGCCTCCAGGAGGAGCAGGCCTG...TCTCCTTTGCCTTCTGCCATGATTGTGAGGCCTCCCTGGCCATGTGCAACTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000635811.1
ENST00000637504.1
3UTR CAA 72 bp GAGTCTGTCCACCACCGTCAGGAGCATCGTGAGGAGTaGATGCTGTTCTGGGGACTCCACGTGAGAGCCTCC +
Preference number: 4 (lower is better)
Translates to: ESVHHRQEHREE*MLFWGLHVRAS
Trigger: GGAGGCTCTCACGTGGAGTCCCCAGAACAGCATCAACTCCTCACGATGCTCCTGACGGTGGTGGACAGACTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635811.1
ENST00000637504.1
CDS-3UTR TCA 90 bp AGCTGTTCTGTAGATGGTTGTTGGGCCACACGCAAAGGACTTGGTTCCTGTCCCCGTCCGCCGTGCTGGTaGGTGAGGATGGGGTCTCGA +
Preference number: 4 (lower is better)
Translates to: SCSVDGCWATRKGLGSCPRPPCW*VRMGSR
Trigger: TCGAGACCCCATCCTCACTCACCAGCACGGCGGACG...GGGACAGGAACCAAGTCCTTTGCGTGTGGCCCAACAACCATCTACAGAACAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000294309.8
ENST00000542467.1
ENST00000635811.1
CDS-3UTR TCA 90 bp CCTGTCCCCAGCTTAGTGGTCCGTCAGAGGAAAGGTCTCTTCCTGCCTGGCTGGTCCAGCTGGACCTTCTaGAGCACCTGCAGCAAGTTC +
Preference number: 4 (lower is better)
Translates to: PVPSLVVRQRKGLFLPGWSSWTF*STCSKF
Trigger: GAACTTGCTGCAGGTGCTTCAGAAGGTCCAGCTGGA...CCAGCCAGGCAGGAAGAGACCTTTCCTCTGACGGACCACTAAGCTGGGGACAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294309.8
ENST00000542467.1
ENST00000635811.1
CDS-3UTR TCA 90 bp GATGCTGTTCTGGGGACTCCACGTGAGAGCCTCCTGGGTCACTGCTGTTTCCAGGGTTTGCCAGGGCGATaGGGTTCCCCAGGTAGTCAA +
Preference number: 4 (lower is better)
Translates to: DAVLGTPRESLLGHCCFQGLPGR*GSPGSQ
Trigger: TTGACTACCTGGGGAACCTCATCGCCCTGGCAAACC...CTGGAAACAGCAGTGACCCAGGAGGCTCTCACGTGGAGTCCCCAGAACAGCATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637504.1
CDS-3UTR TCA 90 bp ACAGCAGAGTCAGGAGGACTCCTGTCCTTTGACCTGAGGCCAAGAGCCTGCTCTCCAGCAGGACAACGGTaGGGAGCCCGTCAAACACGT +
Preference number: 4 (lower is better)
Translates to: TAESGGLLSFDLRPRACSPAGQR*GARQTR
Trigger: ACGTGTTTGACGGGCTCCTCACCGTTGTCCTGCTGG...AGAGCAGGCTCTTGGCCTCAGGTCAAAGGACAGGAGTCCTCCTGACTCTGCTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000635811.1
ENST00000637342.1
ENST00000637504.1
CDS-3UTR TCA 90 bp AGGGGTACACAGTGTGGGAGTCAAAGCCCCAGTCGGATGAGCAGGGCATCTCTGGACTCACTCCTGACATaGATGCGGGTTGGACGCCGT +
Preference number: 4 (lower is better)
Translates to: RGTQCGSQSPSRMSRASLDSLLT*MRVGRR
Trigger: ACGGCGTCCAACCCGCATTCATGTCAGGAGTGAGTC...CAGAGATGCCCTGCTCATCCGACTGGGGCTTTGACTCCCACACTGTGTACCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294309.8
CDS-3UTR TCA 90 bp GGTTCCTGTCCCCAGCTTAGTGGTCCGTCAGAGGAAAGGTCTCTTCCTGCCTGGCGTGCGACTCACTCCTaGCATGAATGCGGGTTGGAC +
Preference number: 4 (lower is better)
Translates to: GSCPQLSGPSEERSLPAWRATHS*HECGLD
Trigger: GTCCAACCCGCATTCATGTCAGGAGTGAGTCGCACG...CCAGGCAGGAAGAGACCTTTCCTCTGACGGACCACTAAGCTGGGGACAGGAACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294309.8
CDS-3UTR TCA 90 bp AAGGTCTCTTCCTGCCTGGCTGGCCACAGCATGGCCGCCTCTTCCATGACGGGCCAAGGAAACGTCACATaGACACAACCTGGGAGCCAT +
Preference number: 4 (lower is better)
Translates to: KVSSCLAGHSMAASSMTGQGNVT*TQPGSH
Trigger: ATGGCTCCCAGGTTGTGTTCATGTGACGTTTCCTTG...GCCCGTCATGGAAGAGGCGGCCATGCTGTGGCCAGCCAGGCAGGAAGAGACCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294309.8
CDS-3UTR TCA 90 bp GTTCCTGTCCCCAGCTTAGTGGTCCGTCAGAGGAAAGGTCTCTTCCTGCCTGGCTCAGCAGGACAACGGTaGGGAGCCCGTCAAACACGT +
Preference number: 4 (lower is better)
Translates to: VPVPSLVVRQRKGLFLPGSAGQR*GARQTR
Trigger: ACGTGTTTGACGGGCTCCTCACCGTTGTCCTGCTGA...GCCAGGCAGGAAGAGACCTTTCCTCTGACGGACCACTAAGCTGGGGACAGGAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542467.1
CDS-3UTR TCA 90 bp GTGGACGGGGATGTATGTGACTCACAACTTCATCGGGGCATGGAGAGTCTGTCCTCTGGGGACTCCACGTaGGAGCCTCCTGGGTCACTG +
Preference number: 4 (lower is better)
Translates to: VDGDVCDSQLHRGMESLSSGDST*EPPGSL
Trigger: CAGTGACCCAGGAGGCTCTCACGTGGAGTCCCCAGA...GGACAGACTCTCCATGCCCCGATGAAGTTGTGAGTCACATACATCCCCGTCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000637504.1
CDS-3UTR GCA 90 bp GCTGTGGACGGGGATGTATGTGACTCACAACTTCATCGGGGCATGGAGAGTCTGGGCCGACTTGGATGCTaGGGTAAGTGGTCAGCCCCG +
Preference number: 4 (lower is better)
Translates to: AVDGDVCDSQLHRGMESLGRLGC*GKWSAP
Trigger: CGGGGCTGACCACTTACCGCAGCATCCAAGTCGGCC...CAGACTCTCCATGCCCCGATGAAGTTGTGAGTCACATACATCCCCGTCCACAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000635811.1
ENST00000637504.1
CDS-3UTR GCA 90 bp GAGTCTGTCCACCACCGTCAGGAGCATCGTGAGGAGTTGATGCTGTTCTGGGGACCACAGCCTGATCAATaGAGAGGTCCCACCTGGCCG +
Preference number: 4 (lower is better)
Translates to: ESVHHRQEHREELMLFWGPQPDQ*RGPTWP
Trigger: CGGCCAGGTGGGACCTCTGCATTGATCAGGCTGTGG...TCCCCAGAACAGCATCAACTCCTCACGATGCTCCTGACGGTGGTGGACAGACTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635811.1
ENST00000637504.1
CDS-3UTR GCA 90 bp TCCTGCCTGGCTGGCCACAGCATGGCCGCCTCTTCCATGACGGGCACCTGTGTAGCAGCGACCAGCGGATaGATTTCAAGGTCTTCTTCA +
Preference number: 4 (lower is better)
Translates to: SCLAGHSMAASSMTGTCVAATSG*ISRSSS
Trigger: TGAAGAAGACCTTGAAATGCATCCGCTGGTCGCTGC...TACACAGGTGCCCGTCATGGAAGAGGCGGCCATGCTGTGGCCAGCCAGGCAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294309.8
ENST00000542467.1
ENST00000635811.1
CDS-3UTR GCA 90 bp CCTGTCCCCAGCTTAGTGGTCCGTCAGAGGAAAGGTCTCTTCCTGCCTGGCTGGAGGAACTGGGCGCTCTaGAGAAACGGAGACTGGTAC +
Preference number: 4 (lower is better)
Translates to: PVPSLVVRQRKGLFLPGWRNWAL*RNGDWY
Trigger: GTACCAGTCTCCGTTTCTGCAGAGCGCCCAGTTCCT...CCAGCCAGGCAGGAAGAGACCTTTCCTCTGACGGACCACTAAGCTGGGGACAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294309.8
ENST00000542467.1
ENST00000635811.1
CDS-3UTR GCA 90 bp AGCACAAAAACTCCCTCGATGACAGGGCCTCAGCAGGCCCCAGCCTTGACCCTGAATGGACACCAGGTTTaGCAGGGCGATGAGGTTCCC +
Preference number: 4 (lower is better)
Translates to: STKTPSMTGPQQAPALTLNGHQV*QGDEVP
Trigger: GGGAACCTCATCGCCCTGGCAAACCTGGTGTCCATT...CAGGGTCAAGGCTGGGGCCTGCTGAGGCCCTGTCATCGAGGGAGTTTTTGTGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000635811.1
ENST00000637342.1
ENST00000637504.1
CDS-3UTR GCA 90 bp AGCACAAAAACTCCCTCGATGACAGGGCCTCAGCAGGCCCCAGCCTTGACCCTGAGCAGGCAGCACATCTaGATCCAGCACCAGGAACAC +
Preference number: 4 (lower is better)
Translates to: STKTPSMTGPQQAPALTLSRQHI*IQHQEH
Trigger: GTGTTCCTGGTGCTGGATGCAGATGTGCTGCCTGCT...CAGGGTCAAGGCTGGGGCCTGCTGAGGCCCTGTCATCGAGGGAGTTTTTGTGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000635811.1
ENST00000637342.1
ENST00000637504.1
CDS-3UTR GCA 90 bp ATCCCACAGGGGCTATGGCGTGGGCTCAGCACCTCTGAAGGAAAAGCAGATGAAGCCCAGTACTCCAGCTaGTCGAAGCTCCCACAGGGC +
Preference number: 4 (lower is better)
Translates to: IPQGLWRGLSTSEGKADEAQYSS*SKLPQG
Trigger: GCCCTGTGGGAGCTTCGAGCAGCTGGAGTACTGGGC...TTCATCTGCTTTTCCTTCAGAGGTGCTGAGCCCACGCCATAGCCCCTGTGGGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294309.8
CDS-3UTR GCA 90 bp CTAAGAGCTCCCGGGTGCAGCAATCTGCAACAGCCAGGAGCACGCCTCGCACCCGCAAAACAGAAAAGGTaGCCCTCACTGCAGGTAGAC +
Preference number: 4 (lower is better)
Translates to: LRAPGCSNLQQPGARLAPAKQKR*PSLQVD
Trigger: GTCTACCTGCAGTGAGGGGCACCTTTTCTGTTTTGC...GGGTGCGAGGCGTGCTCCTGGCTGTTGCAGATTGCTGCACCCGGGAGCTCTTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294309.8
CDS-3UTR GCA 90 bp AAACCACCAGCATCCCCACCTGAATGCCCCGGAAGTCTGACGGTTAACCTGTGCCAGCAGGAGGCTAACTaGATTGGGCAGCCCCTGCCA +
Preference number: 4 (lower is better)
Translates to: KPPASPPECPGSLTVNLCQQEAN*IGQPLP
Trigger: TGGCAGGGGCTGCCCAATGCAGTTAGCCTCCTGCTG...GCACAGGTTAACCGTCAGACTTCCGGGGCATTCAGGTGGGGATGCTGGTGGTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000294309.8
CDS-3UTR CCA 90 bp CCCCAGCTTAGTGGTCCGTCAGAGGAAAGGTCTCTTCCTGCCTGGCTGGCCACAATCATGGCCTGTTTGTaGGAGCTGTCCAGCTGGACC +
Preference number: 4 (lower is better)
Translates to: PQLSGPSEERSLPAWLATIMACL*ELSSWT
Trigger: GGTCCAGCTGGACAGCTCCCACAAACAGGCCATGAT...TGTGGCCAGCCAGGCAGGAAGAGACCTTTCCTCTGACGGACCACTAAGCTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294309.8
ENST00000542467.1
ENST00000635811.1
CDS-3UTR CCA 90 bp AGCACAAAAACTCCCTCGATGACAGGGCCTCAGCAGGCCCCAGCCTTGACCCTGATCATGGCCTGTTTGTaGGAGCTGTCCAGCTGGACC +
Preference number: 4 (lower is better)
Translates to: STKTPSMTGPQQAPALTLIMACL*ELSSWT
Trigger: GGTCCAGCTGGACAGCTCCCACAAACAGGCCATGAT...CAGGGTCAAGGCTGGGGCCTGCTGAGGCCCTGTCATCGAGGGAGTTTTTGTGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000635811.1
ENST00000637342.1
ENST00000637504.1
CDS-3UTR CCA 90 bp CTGTCCTTTGACCTGAGGCCAAGAGCCTGCTCTGACCCCTTGTCACCCTTCCCATGGCCGAAGAGGAACTaGGCGCTCTGCAGAAACGGA +
Preference number: 4 (lower is better)
Translates to: LSFDLRPRACSDPLSPFPWPKRN*ALCRNG
Trigger: TCCGTTTCTGCAGAGCGCCCAGTTCCTCTTCGGCCA...TGGGAAGGGTGACAAGGGGTCAGAGCAGGCTCTTGGCCTCAGGTCAAAGGACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000635811.1
ENST00000637342.1
ENST00000637504.1
CDS-3UTR CCA 90 bp GATGCTGTTCTGGGGACTCCACGTGAGAGCCTCCTGGGTCACTGCTGTTTCCAGTGGCCGAAGAGGAACTaGGCGCTCTGCAGAAACGGA +
Preference number: 4 (lower is better)
Translates to: DAVLGTPRESLLGHCCFQWPKRN*ALCRNG
Trigger: TCCGTTTCTGCAGAGCGCCCAGTTCCTCTTCGGCCA...CTGGAAACAGCAGTGACCCAGGAGGCTCTCACGTGGAGTCCCCAGAACAGCATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637504.1
CDS-3UTR CCA 90 bp ACCAGCACAAAAACTCCCTCGATGACAGGGCCTCAGCAGGCCCCAGCCTTGACCCCAGGAACACGCAAATaGACACCAGGTTTGCCAGGG +
Preference number: 4 (lower is better)
Translates to: TSTKTPSMTGPQQAPALTPGTRK*TPGLPG
Trigger: CCCTGGCAAACCTGGTGTCCATTTGCGTGTTCCTGG...GGTCAAGGCTGGGGCCTGCTGAGGCCCTGTCATCGAGGGAGTTTTTGTGCTGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000635811.1
ENST00000637342.1
ENST00000637504.1
CDS-3UTR CCA 90 bp ATCCCACAGGGGCTATGGCGTGGGCTCAGCACCTCTGAAGGAAAAGCAGATGAACTCCGGCCTCCAGCCTaGGTGTGGCAATCGGTACAC +
Preference number: 4 (lower is better)
Translates to: IPQGLWRGLSTSEGKADELRPPA*VWQSVH
Trigger: GTGTACCGATTGCCACACCCAGGCTGGAGGCCGGAG...TTCATCTGCTTTTCCTTCAGAGGTGCTGAGCCCACGCCATAGCCCCTGTGGGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294309.8
CDS-3UTR CCA 90 bp TGTTCTGTAGATGGTTGTTGGGCCACACGCAAAGGACTTGGTTCCTGTCCCCAGCTCTTCCTGCCTGGCTaGCCACAGCATGGCCGCCTC +
Preference number: 4 (lower is better)
Translates to: CSVDGCWATRKGLGSCPQLFLPG*PQHGRL
Trigger: GAGGCGGCCATGCTGTGGCCAGCCAGGCAGGAAGAG...CTGGGGACAGGAACCAAGTCCTTTGCGTGTGGCCCAACAACCATCTACAGAACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294309.8
ENST00000542467.1
ENST00000635811.1
CDS-3UTR CCA 90 bp AAAGGAGAAGCAAGACACATCTTCCATGGGGGCAGGCAAGAGAGAGCATGTGCCCTCTTCCTGCCTGGCTaGCCACAGCATGGCCGCCTC +
Preference number: 4 (lower is better)
Translates to: KGEARHIFHGGRQERACALFLPG*PQHGRL
Trigger: GAGGCGGCCATGCTGTGGCCAGCCAGGCAGGAAGAG...GGCACATGCTCTCTCTTGCCTGCCCCCATGGAAGATGTGTCTTGCTTCTCCTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635811.1
CDS-3UTR CCA 90 bp CCTGGCTGGCCACAGCATGGCCGCCTCTTCCATGACGGGCACCTGTGTAGGCCATCTGTAGATGGTTGTTaGGCCACACGCAAAGGACTT +
Preference number: 4 (lower is better)
Translates to: PGWPQHGRLFHDGHLCRPSVDGC*ATRKGL
Trigger: AAGTCCTTTGCGTGTGGCCCAACAACCATCTACAGA...TGGCCTACACAGGTGCCCGTCATGGAAGAGGCGGCCATGCTGTGGCCAGCCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294309.8
ENST00000542467.1
ENST00000635811.1
CDS-3UTR CCA 90 bp CCAATCTCGATACCGACTGCACTGTTGTTCGGGTCGCCCCCTCCCCCACCATCCCATCCCACCACTAGATaGCACCCAAACCTCAGCAGA +
Preference number: 4 (lower is better)
Translates to: PISIPTALLFGSPPPPPSHPTTR*HPNLSR
Trigger: TCTGCTGAGGTTTGGGTGCCATCTAGTGGTGGGATG...GGATGGTGGGGGAGGGGGCGACCCGAACAACAGTGCAGTCGGTATCGAGATTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000294309.8
CDS-3UTR CCA 90 bp GTTCCTGTCCCCAGCTTAGTGGTCCGTCAGAGGAAAGGTCTCTTCCTGCCTGGCCCCCGGAGTTGTTTCTaGGAGTTGCTGGGTCCACCT +
Preference number: 4 (lower is better)
Translates to: VPVPSLVVRQRKGLFLPGPRSCF*ELLGPP
Trigger: AGGTGGACCCAGCAACTCCCAGAAACAACTCCGGGG...GCCAGGCAGGAAGAGACCTTTCCTCTGACGGACCACTAAGCTGGGGACAGGAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000294309.8
CDS-3UTR CCA 90 bp TTCCTGCCTGGCTGGCCACAGCATGGCCGCCTCTTCCATGACGGGCACCTGTGTGAGGCCTCACAATCATaGCAGAAGGCAAAGGAGAAG +
Preference number: 4 (lower is better)
Translates to: FLPGWPQHGRLFHDGHLCEASQS*QKAKEK
Trigger: CTTCTCCTTTGCCTTCTGCCATGATTGTGAGGCCTC...ACACAGGTGCCCGTCATGGAAGAGGCGGCCATGCTGTGGCCAGCCAGGCAGGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635811.1
CDS-3UTR TCA 90 bp CCCCAGCTTAGTGGTCCGTCAGAGGAAAGGTCTCTTCCTGCCTGGCTGGCCACAATGAAGACCACAGCCTaGTCAATGCAGAGGTCCCAC +
Preference number: 4 (lower is better)
Translates to: PQLSGPSEERSLPAWLATMKTTA*SMQRSH
Trigger: GTGGGACCTCTGCATTGATCAGGCTGTGGTCTTCAT...TGTGGCCAGCCAGGCAGGAAGAGACCTTTCCTCTGACGGACCACTAAGCTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294309.8
ENST00000542467.1
ENST00000635811.1
CDS-3UTR TCA 90 bp GAAAGCGGAGGGCACGGCGCCTCCCTGAAGCACCAGCAGCTGTTCTGTAGATGGGGATCAAGAAGATGGTaGAGCTCAAAGTCCGTTGGC +
Preference number: 4 (lower is better)
Translates to: ESGGHGASLKHQQLFCRWGSRRW*SSKSVG
Trigger: GCCAACGGACTTTGAGCTTCACCATCTTCTTGATCC...CCATCTACAGAACAGCTGCTGGTGCTTCAGGGAGGCGCCGTGCCCTCCGCTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294309.8
ENST00000542467.1
ENST00000635811.1
CDS-3UTR TCA 90 bp GGTTCCTGTCCCCAGCTTAGTGGTCCGTCAGAGGAAAGGTCTCTTCCTGCCTGGGCATTCCGAACATGGTaGAGAGGCACAGGTGGATGG +
Preference number: 4 (lower is better)
Translates to: GSCPQLSGPSEERSLPAWAFRTW*RGTGGW
Trigger: CCATCCACCTGTGCCTCTTCACCATGTTCGGAATGC...CCAGGCAGGAAGAGACCTTTCCTCTGACGGACCACTAAGCTGGGGACAGGAACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294309.8
ENST00000542467.1
ENST00000635811.1
CDS-3UTR TCA 90 bp GGTTCCTGTCCCCAGCTTAGTGGTCCGTCAGAGGAAAGGTCTCTTCCTGCCTGGTCCAGCTGGACCTTCTaGAGCACCTGCAGCAAGTTC +
Preference number: 4 (lower is better)
Translates to: GSCPQLSGPSEERSLPAWSSWTF*STCSKF
Trigger: GAACTTGCTGCAGGTGCTTCAGAAGGTCCAGCTGGA...CCAGGCAGGAAGAGACCTTTCCTCTGACGGACCACTAAGCTGGGGACAGGAACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294309.8
ENST00000542467.1
ENST00000635811.1
CDS-3UTR TCA 90 bp CTGTCCTTTGACCTGAGGCCAAGAGCCTGCTCTGACCCCTTGTCACCCTTCCCAGCTTCATGCTGGGGATaGTACGCAGGAAGCGGAACA +
Preference number: 4 (lower is better)
Translates to: LSFDLRPRACSDPLSPFPASCWG*YAGSGT
Trigger: TGTTCCGCTTCCTGCGTATCATCCCCAGCATGAAGC...TGGGAAGGGTGACAAGGGGTCAGAGCAGGCTCTTGGCCTCAGGTCAAAGGACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000635811.1
ENST00000637342.1
ENST00000637504.1
CDS-3UTR TCA 90 bp GATGCTGTTCTGGGGACTCCACGTGAGAGCCTCCTGGGTCACTGCTGTTTCCAGAGCATCGTGAGGAGTTaGTGCTGTTCTGGGGACTCC +
Preference number: 4 (lower is better)
Translates to: DAVLGTPRESLLGHCCFQSIVRS*CCSGDS
Trigger: GGAGTCCCCAGAACAGCATCAACTCCTCACGATGCT...CTGGAAACAGCAGTGACCCAGGAGGCTCTCACGTGGAGTCCCCAGAACAGCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637504.1
CDS-3UTR TCA 90 bp CGGACTAGACATGTTGGGCTACACGGGCCCTGCACCAGGGCAGTCATCATCTTTTCCTGTCCTTTGACCTaGGGCCAAGAGCCTGCTCTG +
Preference number: 4 (lower is better)
Translates to: RTRHVGLHGPCTRAVIIFSCPLT*GQEPAL
Trigger: CAGAGCAGGCTCTTGGCCTCAGGTCAAAGGACAGGA...AAAGATGATGACTGCCCTGGTGCAGGGCCCGTGTAGCCCAACATGTCTAGTCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000635811.1
ENST00000637342.1
ENST00000637504.1
CDS-3UTR TCA 90 bp GAGTCTGTCCACCACCGTCAGGAGCATCGTGAGGAGTTGATGCTGTTCTGGGGAAGGACTCCTGTCCTTTaGCCTGAGGCCAAGAGCCTG +
Preference number: 4 (lower is better)
Translates to: ESVHHRQEHREELMLFWGRTPVL*PEAKSL
Trigger: CAGGCTCTTGGCCTCAGGTCAAAGGACAGGAGTCCT...TCCCCAGAACAGCATCAACTCCTCACGATGCTCCTGACGGTGGTGGACAGACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635811.1
ENST00000637504.1
CDS-3UTR GCA 90 bp GCTGTGGACGGGGATGTATGTGACTCACAACTTCATCGGGGCATGGAGAGTCTGCAGGGCCGACTTGGATaGTGCGGTAAGTGGTCAGCC +
Preference number: 4 (lower is better)
Translates to: AVDGDVCDSQLHRGMESLQGRLG*CGKWSA
Trigger: GGCTGACCACTTACCGCAGCATCCAAGTCGGCCCTG...CAGACTCTCCATGCCCCGATGAAGTTGTGAGTCACATACATCCCCGTCCACAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000635811.1
ENST00000637504.1
CDS-3UTR GCA 90 bp TCCTGGAGGCCCCTCATCCCCAGTAAGAGCCCGCCACGGACTAGACATGTTGGGGCAGCGACCAGCGGATaGATTTCAAGGTCTTCTTCA +
Preference number: 4 (lower is better)
Translates to: SWRPLIPSKSPPRTRHVGAATSG*ISRSSS
Trigger: TGAAGAAGACCTTGAAATGCATCCGCTGGTCGCTGC...CCCAACATGTCTAGTCCGTGGCGGGCTCTTACTGGGGATGAGGGGCCTCCAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000635811.1
ENST00000637342.1
ENST00000637504.1
CDS-3UTR GCA 90 bp GGCAAAGGAGAAGCAAGACACATCTTCCATGGGGGCAGGCAAGAGAGAGCATGTGGGCTTCACCCCAACTaGCTGAGGGAAGGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: GKGEARHIFHGGRQERACGLHPN*LREGSS
Trigger: GGAGGAGCCTTCCCTCAGGCAGTTGGGGTGAAGCCC...ACATGCTCTCTCTTGCCTGCCCCCATGGAAGATGTGTCTTGCTTCTCCTTTGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000635811.1
ENST00000637342.1
ENST00000637504.1
CDS-3UTR GCA 90 bp GTTCCTGTCCCCAGCTTAGTGGTCCGTCAGAGGAAAGGTCTCTTCCTGCCTGGCAGGAACTGGGCGCTCTaGAGAAACGGAGACTGGTAC +
Preference number: 4 (lower is better)
Translates to: VPVPSLVVRQRKGLFLPGRNWAL*RNGDWY
Trigger: GTACCAGTCTCCGTTTCTGCAGAGCGCCCAGTTCCT...GCCAGGCAGGAAGAGACCTTTCCTCTGACGGACCACTAAGCTGGGGACAGGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294309.8
ENST00000542467.1
ENST00000635811.1
CDS-3UTR GCA 90 bp CACGGACTAGACATGTTGGGCTACACGGGCCCTGCACCAGGGCAGTCATCATCTAGCAGGCAGCACATCTaGATCCAGCACCAGGAACAC +
Preference number: 4 (lower is better)
Translates to: HGLDMLGYTGPAPGQSSSSRQHI*IQHQEH
Trigger: GTGTTCCTGGTGCTGGATGCAGATGTGCTGCCTGCT...AGATGATGACTGCCCTGGTGCAGGGCCCGTGTAGCCCAACATGTCTAGTCCGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000635811.1
ENST00000637342.1
ENST00000637504.1
CDS-3UTR GCA 90 bp ACTGAAGCAGCTATAAAAGAAAGCGGAGGGCACGGCGCCTCCCTGAAGCACCAGGCCCGTCAAACACGTTaGTGGGGTAGGACAGGTACC +
Preference number: 4 (lower is better)
Translates to: TEAAIKESGGHGASLKHQARQTR*WGRTGT
Trigger: GGTACCTGTCCTACCCCAGCAACGTGTTTGACGGGC...CTGGTGCTTCAGGGAGGCGCCGTGCCCTCCGCTTTCTTTTATAGCTGCTTCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000294309.8
ENST00000542467.1
ENST00000635811.1
CDS-3UTR GCA 90 bp GGCAAAGGAGAAGCAAGACACATCTTCCATGGGGGCAGGCAAGAGAGAGCATGTGCCCAGTACTCCAGCTaGTCGAAGCTCCCACAGGGC +
Preference number: 4 (lower is better)
Translates to: GKGEARHIFHGGRQERACAQYSS*SKLPQG
Trigger: GCCCTGTGGGAGCTTCGAGCAGCTGGAGTACTGGGC...ACATGCTCTCTCTTGCCTGCCCCCATGGAAGATGTGTCTTGCTTCTCCTTTGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000635811.1
ENST00000637342.1
CDS-3UTR GCA 90 bp TGTTCTGTAGATGGTTGTTGGGCCACACGCAAAGGACTTGGTTCCTGTCCCCAGGCATTGGGCAGCCCCTaGCAGGAGGCAGTGTCCATC +
Preference number: 4 (lower is better)
Translates to: CSVDGCWATRKGLGSCPQALGSP*QEAVSI
Trigger: GATGGACACTGCCTCCTGGCAGGGGCTGCCCAATGC...CTGGGGACAGGAACCAAGTCCTTTGCGTGTGGCCCAACAACCATCTACAGAACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294309.8
CDS-3UTR GCA 90 bp AGCTGTTCTGTAGATGGTTGTTGGGCCACACGCAAAGGACTTGGTTCCTGTCCCGGGCTACACGGGCCCTaGACCAGGGCAGTCATCATC +
Preference number: 4 (lower is better)
Translates to: SCSVDGCWATRKGLGSCPGLHGP*TRAVII
Trigger: GATGATGACTGCCCTGGTGCAGGGCCCGTGTAGCCC...GGGACAGGAACCAAGTCCTTTGCGTGTGGCCCAACAACCATCTACAGAACAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635811.1
CDS-3UTR CCA 90 bp ACTGAAGCAGCTATAAAAGAAAGCGGAGGGCACGGCGCCTCCCTGAAGCACCAGTCACATCGGGGTTGTTaGCCGTGGTCAGCAGCACCA +
Preference number: 4 (lower is better)
Translates to: TEAAIKESGGHGASLKHQSHRGC*PWSAAP
Trigger: TGGTGCTGCTGACCACGGCCAACAACCCCGATGTGA...CTGGTGCTTCAGGGAGGCGCCGTGCCCTCCGCTTTCTTTTATAGCTGCTTCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000294309.8
ENST00000542467.1
ENST00000635811.1
CDS-3UTR CCA 90 bp AAGGTCTCTTCCTGCCTGGCTGGCCACAGCATGGCCGCCTCTTCCATGACGGGCCATAGGCCCGGTTCTTaGAATACGCAGGAATCATCA +
Preference number: 4 (lower is better)
Translates to: KVSSCLAGHSMAASSMTGHRPGS*NTQESS
Trigger: TGATGATTCCTGCGTATTCCAAGAACCGGGCCTATG...GCCCGTCATGGAAGAGGCGGCCATGCTGTGGCCAGCCAGGCAGGAAGAGACCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294309.8
ENST00000542467.1
ENST00000635811.1
CDS-3UTR CCA 90 bp CGGACTAGACATGTTGGGCTACACGGGCCCTGCACCAGGGCAGTCATCATCTTTTGGCCGAAGAGGAACTaGGCGCTCTGCAGAAACGGA +
Preference number: 4 (lower is better)
Translates to: RTRHVGLHGPCTRAVIIFWPKRN*ALCRNG
Trigger: TCCGTTTCTGCAGAGCGCCCAGTTCCTCTTCGGCCA...AAAGATGATGACTGCCCTGGTGCAGGGCCCGTGTAGCCCAACATGTCTAGTCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000635811.1
ENST00000637342.1
ENST00000637504.1
CDS-3UTR CCA 90 bp CTGTCCTTTGACCTGAGGCCAAGAGCCTGCTCTGACCCCTTGTCACCCTTCCCACGTCAAACACGTTGCTaGGGTAGGACAGGTACCCTC +
Preference number: 4 (lower is better)
Translates to: LSFDLRPRACSDPLSPFPRQTRC*GRTGTL
Trigger: GAGGGTACCTGTCCTACCCCAGCAACGTGTTTGACG...TGGGAAGGGTGACAAGGGGTCAGAGCAGGCTCTTGGCCTCAGGTCAAAGGACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000635811.1
ENST00000637342.1
ENST00000637504.1
CDS-3UTR CCA 90 bp TGTTCTGTAGATGGTTGTTGGGCCACACGCAAAGGACTTGGTTCCTGTCCCCAGCACAGGTGCGGGTGCTaGCTCAGCCTCTCTGTGAGC +
Preference number: 4 (lower is better)
Translates to: CSVDGCWATRKGLGSCPQHRCGC*LSLSVS
Trigger: GCTCACAGAGAGGCTGAGCCAGCACCCGCACCTGTG...CTGGGGACAGGAACCAAGTCCTTTGCGTGTGGCCCAACAACCATCTACAGAACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294309.8
ENST00000542467.1
ENST00000635811.1
CDS-3UTR CCA 90 bp AAAGGTCTCTTCCTGCCTGGCTGGCCACAGCATGGCCGCCTCTTCCATGACGGGTCTGAAAGGTCCCTGTaGAGTCGACGAGGGAATTCT +
Preference number: 4 (lower is better)
Translates to: KGLFLPGWPQHGRLFHDGSERSL*SRRGNS
Trigger: AGAATTCCCTCGTCGACTCCACAGGGACCTTTCAGA...CCCGTCATGGAAGAGGCGGCCATGCTGTGGCCAGCCAGGCAGGAAGAGACCTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294309.8
ENST00000635811.1
CDS-3UTR CCA 90 bp AGCTGTTCTGTAGATGGTTGTTGGGCCACACGCAAAGGACTTGGTTCCTGTCCCAACCTGTGCAGGCCCTaGTCAGGCCTGTGGTCCCCA +
Preference number: 4 (lower is better)
Translates to: SCSVDGCWATRKGLGSCPNLCRP*SGLWSP
Trigger: TGGGGACCACAGGCCTGACCAGGGCCTGCACAGGTT...GGGACAGGAACCAAGTCCTTTGCGTGTGGCCCAACAACCATCTACAGAACAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294309.8
ENST00000635811.1
CDS-3UTR CCA 90 bp AAAGAAAGCGGAGGGCACGGCGCCTCCCTGAAGCACCAGCAGCTGTTCTGTAGAGAGTTGATGCTGTTCTaGGGACTCCACGTGAGAGCC +
Preference number: 4 (lower is better)
Translates to: KESGGHGASLKHQQLFCRELMLF*GLHVRA
Trigger: GGCTCTCACGTGGAGTCCCCAGAACAGCATCAACTC...TCTACAGAACAGCTGCTGGTGCTTCAGGGAGGCGCCGTGCCCTCCGCTTTCTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635811.1
CDS-3UTR CCA 90 bp CTGTCCTTTGACCTGAGGCCAAGAGCCTGCTCTGACCCCTTGTCACCCTTCCCAAACTTCATCGGGGCATaGAGAGTCTGTCCACCACCG +
Preference number: 4 (lower is better)
Translates to: LSFDLRPRACSDPLSPFPNFIGA*RVCPPP
Trigger: CGGTGGTGGACAGACTCTCCATGCCCCGATGAAGTT...TGGGAAGGGTGACAAGGGGTCAGAGCAGGCTCTTGGCCTCAGGTCAAAGGACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000635811.1
ENST00000637342.1
ENST00000637504.1
CDS-3UTR CCA 90 bp ACCAGCACAAAAACTCCCTCGATGACAGGGCCTCAGCAGGCCCCAGCCTTGACCAAGACACATCTTCCATaGGGGCAGGCAAGAGAGAGC +
Preference number: 4 (lower is better)
Translates to: TSTKTPSMTGPQQAPALTKTHLP*GQARES
Trigger: GCTCTCTCTTGCCTGCCCCCATGGAAGATGTGTCTT...GGTCAAGGCTGGGGCCTGCTGAGGCCCTGTCATCGAGGGAGTTTTTGTGCTGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000635811.1
ENST00000637342.1
ENST00000637504.1
3UTR CAA 72 bp AGAGTGACCAGGGCAGCCGCAAAGTCATCGAAGTTGTaGGCCCAGTACTCCAGCTGCTCGAAGCTCCCACAG +
Preference number: 4 (lower is better)
Translates to: RVTRAAAKSSKL*AQYSSCSKLPQ
Trigger: CTGTGGGAGCTTCGAGCAGCTGGAGTACTGGGCCAACAACTTCGATGACTTTGCGGCTGCCCTGGTCACTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635811.1
3UTR CAA 72 bp CACAGAGTGACCAGGGCAGCCGCAAAGTCATCGAAGTaGTTGGCCCAGTACTCCAGCTGCTCGAAGCTCCCA +
Preference number: 4 (lower is better)
Translates to: HRVTRAAAKSSK*LAQYSSCSKLP
Trigger: TGGGAGCTTCGAGCAGCTGGAGTACTGGGCCAACAACTTCGATGACTTTGCGGCTGCCCTGGTCACTCTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635811.1
3UTR CAA 72 bp TCCTTTGACCTGAGGCCAAGAGCCTGCTCTGACCCCTaGTCACCCTTCCCAACTGTGCCCAGGTCAGAAGTC +
Preference number: 4 (lower is better)
Translates to: SFDLRPRACSDP*SPFPTVPRSEV
Trigger: GACTTCTGACCTGGGCACAGTTGGGAAGGGTGACAAGGGGTCAGAGCAGGCTCTTGGCCTCAGGTCAAAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000635811.1
ENST00000637342.1
ENST00000637504.1
CDS-3UTR TCA 90 bp CCCCAGCTTAGTGGTCCGTCAGAGGAAAGGTCTCTTCCTGCCTGGCTGGCCACAGGAACTGACTGTAGATaGTGGCTGTCAGCAGGTTCA +
Preference number: 4 (lower is better)
Translates to: PQLSGPSEERSLPAWLATGTDCR*WLSAGS
Trigger: TGAACCTGCTGACAGCCATCATCTACAGTCAGTTCC...TGTGGCCAGCCAGGCAGGAAGAGACCTTTCCTCTGACGGACCACTAAGCTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294309.8
ENST00000542467.1
ENST00000635811.1
CDS-3UTR TCA 90 bp TGGCCACAGCATGGCCGCCTCTTCCATGACGGGCACCTGTGTAGGCCAGCCTCTTTCTGTCAAGCTCGTTaGAGAGCTTCTGAAACTCCT +
Preference number: 4 (lower is better)
Translates to: WPQHGRLFHDGHLCRPASFCQAR*RASETP
Trigger: AGGAGTTTCAGAAGCTCTTCAACGAGCTTGACAGAA...AGAGGCTGGCCTACACAGGTGCCCGTCATGGAAGAGGCGGCCATGCTGTGGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294309.8
ENST00000542467.1
ENST00000635811.1
CDS-3UTR TCA 90 bp CTCACTGAAGCAGCTATAAAAGAAAGCGGAGGGCACGGCGCCTCCCTGAAGCACCCAGGGCAAAGACCTTaGGCAGCATCTCCAACAGGT +
Preference number: 4 (lower is better)
Translates to: LTEAAIKESGGHGASLKHPGQRP*AASPTG
Trigger: ACCTGTTGGAGATGCTGCTCAAGGTCTTTGCCCTGG...GTGCTTCAGGGAGGCGCCGTGCCCTCCGCTTTCTTTTATAGCTGCTTCAGTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294309.8
ENST00000542467.1
ENST00000635811.1
CDS-3UTR TCA 90 bp ACCAGCACAAAAACTCCCTCGATGACAGGGCCTCAGCAGGCCCCAGCCTTGACCGTACACAGCCAGAGTTaGGATCTCCAAAACCAGCAG +
Preference number: 4 (lower is better)
Translates to: TSTKTPSMTGPQQAPALTVHSQS*DLQNQQ
Trigger: CTGCTGGTTTTGGAGATCTCAACTCTGGCTGTGTAC...GGTCAAGGCTGGGGCCTGCTGAGGCCCTGTCATCGAGGGAGTTTTTGTGCTGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000637342.1
CDS-3UTR TCA 90 bp CCACAAGAACAGTACAGGGGAAACCACCCCCGTGATTCAATGATCTCCACCTGGCTTGGACCACGGGCCTaGGTAGCGCCGATATGCATC +
Preference number: 4 (lower is better)
Translates to: PQEQYRGNHPRDSMISTWLGPRA*VAPICI
Trigger: GATGCATATCGGCGCTACTCAGGCCCGTGGTCCAAG...CCAGGTGGAGATCATTGAATCACGGGGGTGGTTTCCCCTGTACTGTTCTTGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000635811.1
CDS-3UTR TCA 90 bp ACAGCAGAGTCAGGAGGACTCCTGTCCTTTGACCTGAGGCCAAGAGCCTGCTCTCGGGGGTCCCACTTGTaGAGGAAGTTCTCCAGAATC +
Preference number: 4 (lower is better)
Translates to: TAESGGLLSFDLRPRACSRGSHL*RKFSRI
Trigger: GATTCTGGAGAACTTCCTTCACAAGTGGGACCCCCG...AGAGCAGGCTCTTGGCCTCAGGTCAAAGGACAGGAGTCCTCCTGACTCTGCTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635811.1
CDS-3UTR TCA 90 bp GGCGTGCTTCAGGTGACAACAAGGCTTTCCACACACTGCTCGCTCGCCCCACCTGGTTGGCCCCTGAAGTaGGAAAACCATTGGTCAATC +
Preference number: 4 (lower is better)
Translates to: GVLQVTTRLSTHCSLAPPGWPLK*ENHWSI
Trigger: GATTGACCAATGGTTTTCTCACTTCAGGGGCCAACC...AGGTGGGGCGAGCGAGCAGTGTGTGGAAAGCCTTGTTGTCACCTGAAGCACGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000294309.8
CDS-3UTR TCA 90 bp GGCAAAGGAGAAGCAAGACACATCTTCCATGGGGGCAGGCAAGAGAGAGCATGTTCCTGGGTCAGGGCCTaGGTAGCGCCGATATGCATC +
Preference number: 4 (lower is better)
Translates to: GKGEARHIFHGGRQERACSWVRA*VAPICI
Trigger: GATGCATATCGGCGCTACTCAGGCCCTGACCCAGGA...ACATGCTCTCTCTTGCCTGCCCCCATGGAAGATGTGTCTTGCTTCTCCTTTGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637342.1
CDS-3UTR GCA 90 bp GCAGGCCCCAGCCTTGACCCTGGCTTTCACGGTCCATTGGGTTTTGTTATAATTGGGCTTCACCCCAACTaGCTGAGGGAAGGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: AGPSLDPGFHGPLGFVIIGLHPN*LREGSS
Trigger: GGAGGAGCCTTCCCTCAGGCAGTTGGGGTGAAGCCC...AATTATAACAAAACCCAATGGACCGTGAAAGCCAGGGTCAAGGCTGGGGCCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000635811.1
ENST00000637342.1
ENST00000637504.1
CDS-3UTR GCA 90 bp AGCACAAAAACTCCCTCGATGACAGGGCCTCAGCAGGCCCCAGCCTTGACCCTGCTGAGAGCAGAACACTaGCATAGGAACGCACCTTCT +
Preference number: 4 (lower is better)
Translates to: STKTPSMTGPQQAPALTLLRAEH*HRNAPS
Trigger: AGAAGGTGCGTTCCTATGGCAGTGTTCTGCTCTCAG...CAGGGTCAAGGCTGGGGCCTGCTGAGGCCCTGTCATCGAGGGAGTTTTTGTGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000635811.1
ENST00000637342.1
ENST00000637504.1
CDS-3UTR GCA 90 bp TGTGACTCACAACTTCATCGGGGCATGGAGAGTCTGTCCACCACCGTCAGGAGCAGCAGGCAGCACATCTaGATCCAGCACCAGGAACAC +
Preference number: 4 (lower is better)
Translates to: CDSQLHRGMESLSTTVRSSRQHI*IQHQEH
Trigger: GTGTTCCTGGTGCTGGATGCAGATGTGCTGCCTGCT...GCTCCTGACGGTGGTGGACAGACTCTCCATGCCCCGATGAAGTTGTGAGTCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635811.1
ENST00000637504.1
CDS-3UTR GCA 90 bp TCCCACAGGGGCTATGGCGTGGGCTCAGCACCTCTGAAGGAAAAGCAGATGAAAGCCCGTCAAACACGTTaGTGGGGTAGGACAGGTACC +
Preference number: 4 (lower is better)
Translates to: SHRGYGVGSAPLKEKQMKARQTR*WGRTGT
Trigger: GGTACCTGTCCTACCCCAGCAACGTGTTTGACGGGC...TTTCATCTGCTTTTCCTTCAGAGGTGCTGAGCCCACGCCATAGCCCCTGTGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000294309.8
CDS-3UTR GCA 90 bp GACGGGGATGTATGTGACTCACAACTTCATCGGGGCATGGAGAGTCTGTCCACCGCCCGTCAAACACGTTaGTGGGGTAGGACAGGTACC +
Preference number: 4 (lower is better)
Translates to: DGDVCDSQLHRGMESLSTARQTR*WGRTGT
Trigger: GGTACCTGTCCTACCCCAGCAACGTGTTTGACGGGC...GGTGGACAGACTCTCCATGCCCCGATGAAGTTGTGAGTCACATACATCCCCGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000635811.1
ENST00000637504.1
CDS-3UTR GCA 90 bp GCTGTGGACGGGGATGTATGTGACTCACAACTTCATCGGGGCATGGAGAGTCTGGCCCGTCAAACACGTTaGTGGGGTAGGACAGGTACC +
Preference number: 4 (lower is better)
Translates to: AVDGDVCDSQLHRGMESLARQTR*WGRTGT
Trigger: GGTACCTGTCCTACCCCAGCAACGTGTTTGACGGGC...CAGACTCTCCATGCCCCGATGAAGTTGTGAGTCACATACATCCCCGTCCACAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000635811.1
ENST00000637504.1
CDS-3UTR GCA 90 bp GACGGGGATGTATGTGACTCACAACTTCATCGGGGCATGGAGAGTCTGTCCACCAACGCACGCATGTTCTaGACCAGGCCCAGGACGGTA +
Preference number: 4 (lower is better)
Translates to: DGDVCDSQLHRGMESLSTNARMF*TRPRTV
Trigger: TACCGTCCTGGGCCTGGTGCAGAACATGCGTGCGTT...GGTGGACAGACTCTCCATGCCCCGATGAAGTTGTGAGTCACATACATCCCCGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000635811.1
ENST00000637504.1
CDS-3UTR GCA 90 bp AGAGCCCGCCACGGACTAGACATGTTGGGCTACACGGGCCCTGCACCAGGGCAGCAAAGGGTCAAGCACTaGTTTTTCTGCATTGCATTC +
Preference number: 4 (lower is better)
Translates to: RARHGLDMLGYTGPAPGQQRVKH*FFCIAF
Trigger: GAATGCAATGCAGAAAAAGCAGTGCTTGACCCTTTG...CTGCCCTGGTGCAGGGCCCGTGTAGCCCAACATGTCTAGTCCGTGGCGGGCTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000635811.1
ENST00000637342.1
ENST00000637504.1
CDS-3UTR CCA 90 bp CTGACATGTGGGGATCATTACAATTCAAGGCAAGATTTGGGTGGGGACACAGCCAGAGGCACAGGTGGATaGCCAGCAGCAGCCCGACGC +
Preference number: 4 (lower is better)
Translates to: LTCGDHYNSRQDLGGDTARGTGG*PAAARR
Trigger: GCGTCGGGCTGCTGCTGGCCATCCACCTGTGCCTCT...GGCTGTGTCCCCACCCAAATCTTGCCTTGAATTGTAATGATCCCCACATGTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000635811.1
ENST00000637342.1
ENST00000637504.1
CDS-3UTR CCA 90 bp CACAGTTGCACATGGCCAGGGAGGCCTCACAATCATGGCAGAAGGCAAAGGAGATCACATCGGGGTTGTTaGCCGTGGTCAGCAGCACCA +
Preference number: 4 (lower is better)
Translates to: HSCTWPGRPHNHGRRQRRSHRGC*PWSAAP
Trigger: TGGTGCTGCTGACCACGGCCAACAACCCCGATGTGA...TCTCCTTTGCCTTCTGCCATGATTGTGAGGCCTCCCTGGCCATGTGCAACTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635811.1
ENST00000637504.1
CDS-3UTR CCA 90 bp AGTAAGAGCCCGCCACGGACTAGACATGTTGGGCTACACGGGCCCTGCACCAGGCATAGGCCCGGTTCTTaGAATACGCAGGAATCATCA +
Preference number: 4 (lower is better)
Translates to: SKSPPRTRHVGLHGPCTRHRPGS*NTQESS
Trigger: TGATGATTCCTGCGTATTCCAAGAACCGGGCCTATG...CCTGGTGCAGGGCCCGTGTAGCCCAACATGTCTAGTCCGTGGCGGGCTCTTACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000635811.1
ENST00000637342.1
ENST00000637504.1
CDS-3UTR CCA 90 bp GTTCCTGTCCCCAGCTTAGTGGTCCGTCAGAGGAAAGGTCTCTTCCTGCCTGGCGCACCTTCTCCATCATaGCCTGTTTGTGGGAGCTGT +
Preference number: 4 (lower is better)
Translates to: VPVPSLVVRQRKGLFLPGAPSPS*PVCGSC
Trigger: ACAGCTCCCACAAACAGGCCATGATGGAGAAGGTGC...GCCAGGCAGGAAGAGACCTTTCCTCTGACGGACCACTAAGCTGGGGACAGGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294309.8
ENST00000542467.1
ENST00000635811.1
CDS-3UTR CCA 90 bp GGCTCGGTGTGGAGTGTGATGGGGAGTGGTGTCCCCGGAGTTGTTTCTGGGAGTCACATGAACACAACCTaGGAGCCATGGGCTTATCTC +
Preference number: 4 (lower is better)
Translates to: GSVWSVMGSGVPGVVSGSHMNTT*EPWAYL
Trigger: GAGATAAGCCCATGGCTCCCAGGTTGTGTTCATGTG...ACTCCCAGAAACAACTCCGGGGACACCACTCCCCATCACACTCCACACCGAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294309.8
CDS-3UTR CCA 90 bp AGGGGTACACAGTGTGGGAGTCAAAGCCCCAGTCGGATGAGCAGGGCATCTCTGCAGGATCCACACAGGTaGGAGCAAGGAAGGAAGGAA +
Preference number: 4 (lower is better)
Translates to: RGTQCGSQSPSRMSRASLQDPHR*EQGRKE
Trigger: TTCCTTCCTTCCTTGCTCCCACCTGTGTGGATCCTG...CAGAGATGCCCTGCTCATCCGACTGGGGCTTTGACTCCCACACTGTGTACCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294309.8
CDS-3UTR CCA 90 bp TCCTGGAGGCCCCTCATCCCCAGTAAGAGCCCGCCACGGACTAGACATGTTGGGATTCAAGGCAAGATTTaGGTGGGGACACAGCCCAAT +
Preference number: 4 (lower is better)
Translates to: SWRPLIPSKSPPRTRHVGIQGKI*VGTQPN
Trigger: ATTGGGCTGTGTCCCCACCCAAATCTTGCCTTGAAT...CCCAACATGTCTAGTCCGTGGCGGGCTCTTACTGGGGATGAGGGGCCTCCAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000635811.1
ENST00000637342.1
ENST00000637504.1
CDS-3UTR CCA 90 bp GTTCCTGTCCCCAGCTTAGTGGTCCGTCAGAGGAAAGGTCTCTTCCTGCCTGGCACTCACAGTTGCACATaGCCAGGGAGGCCTCACAAT +
Preference number: 4 (lower is better)
Translates to: VPVPSLVVRQRKGLFLPGTHSCT*PGRPHN
Trigger: ATTGTGAGGCCTCCCTGGCCATGTGCAACTGTGAGT...GCCAGGCAGGAAGAGACCTTTCCTCTGACGGACCACTAAGCTGGGGACAGGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635811.1
CDS-3UTR CCA 90 bp CATCGTGAGGAGTTGATGCTGTTCTGGGGACTCCACGTGAGAGCCTCCTGGGTCACTCACAGTTGCACATaGCCAGGGAGGCCTCACAAT +
Preference number: 4 (lower is better)
Translates to: HREELMLFWGLHVRASWVTHSCT*PGRPHN
Trigger: ATTGTGAGGCCTCCCTGGCCATGTGCAACTGTGAGT...GACCCAGGAGGCTCTCACGTGGAGTCCCCAGAACAGCATCAACTCCTCACGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635811.1
ENST00000637504.1
3UTR CAA 72 bp GCCTCCCTGAAGCACCAGCAGCTGTTCTGTAGATGGTaGTTGGGCCACACGCAAAGGACTTGGTTCCTGTCC +
Preference number: 4 (lower is better)
Translates to: ASLKHQQLFCRW*LGHTQRTWFLS
Trigger: GGACAGGAACCAAGTCCTTTGCGTGTGGCCCAACAACCATCTACAGAACAGCTGCTGGTGCTTCAGGGAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294309.8
ENST00000542467.1
ENST00000635811.1
CDS-3UTR TCA 90 bp CTCACTGAAGCAGCTATAAAAGAAAGCGGAGGGCACGGCGCCTCCCTGAAGCACATGAAGACCACAGCCTaGTCAATGCAGAGGTCCCAC +
Preference number: 4 (lower is better)
Translates to: LTEAAIKESGGHGASLKHMKTTA*SMQRSH
Trigger: GTGGGACCTCTGCATTGATCAGGCTGTGGTCTTCAT...GTGCTTCAGGGAGGCGCCGTGCCCTCCGCTTTCTTTTATAGCTGCTTCAGTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294309.8
ENST00000542467.1
ENST00000635811.1
CDS-3UTR TCA 90 bp CTGTCCTTTGACCTGAGGCCAAGAGCCTGCTCTGACCCCTTGTCACCCTTCCCAGGATCAAGAAGATGGTaGAGCTCAAAGTCCGTTGGC +
Preference number: 4 (lower is better)
Translates to: LSFDLRPRACSDPLSPFPGSRRW*SSKSVG
Trigger: GCCAACGGACTTTGAGCTTCACCATCTTCTTGATCC...TGGGAAGGGTGACAAGGGGTCAGAGCAGGCTCTTGGCCTCAGGTCAAAGGACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000635811.1
ENST00000637342.1
ENST00000637504.1
CDS-3UTR TCA 90 bp ATGTGGGGATCATTACAATTCAAGGCAAGATTTGGGTGGGGACACAGCCCAATCCGTCCGCCGTGCTGGTaGGTGAGGATGGGGTCTCGA +
Preference number: 4 (lower is better)
Translates to: MWGSLQFKARFGWGHSPIRPPCW*VRMGSR
Trigger: TCGAGACCCCATCCTCACTCACCAGCACGGCGGACG...GATTGGGCTGTGTCCCCACCCAAATCTTGCCTTGAATTGTAATGATCCCCACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000635811.1
ENST00000637342.1
ENST00000637504.1
CDS-3UTR TCA 90 bp CAAACATTTATGGGACCACCTACTGAGTACCGGGTGCTGTGGACGGGGATGTATATCCGCAGGGGCTCATaGCACACGAGACTCAGGGAC +
Preference number: 4 (lower is better)
Translates to: QTFMGPPTEYRVLWTGMYIRRGS*HTRLRD
Trigger: GTCCCTGAGTCTCGTGTGTCATGAGCCCCTGCGGAT...ATACATCCCCGTCCACAGCACCCGGTACTCAGTAGGTGGTCCCATAAATGTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000635811.1
ENST00000637342.1
ENST00000637504.1
CDS-3UTR TCA 90 bp TCCTGGAGGCCCCTCATCCCCAGTAAGAGCCCGCCACGGACTAGACATGTTGGGTTCTGTCAAGCTCGTTaGAGAGCTTCTGAAACTCCT +
Preference number: 4 (lower is better)
Translates to: SWRPLIPSKSPPRTRHVGFCQAR*RASETP
Trigger: AGGAGTTTCAGAAGCTCTTCAACGAGCTTGACAGAA...CCCAACATGTCTAGTCCGTGGCGGGCTCTTACTGGGGATGAGGGGCCTCCAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000635811.1
ENST00000637342.1
ENST00000637504.1
CDS-3UTR TCA 90 bp TGTTCTGTAGATGGTTGTTGGGCCACACGCAAAGGACTTGGTTCCTGTCCCCAGGGAAGCGGAACACGATaGGCATGTTCAGCATGCGGG +
Preference number: 4 (lower is better)
Translates to: CSVDGCWATRKGLGSCPQGSGTR*ACSACG
Trigger: CCCGCATGCTGAACATGCTCATCGTGTTCCGCTTCC...CTGGGGACAGGAACCAAGTCCTTTGCGTGTGGCCCAACAACCATCTACAGAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294309.8
ENST00000635811.1
CDS-3UTR TCA 90 bp CACAGTTGCACATGGCCAGGGAGGCCTCACAATCATGGCAGAAGGCAAAGGAGATCAAGTTCCACAGAGTaGCCAGGGCAGCCGCAAAGT +
Preference number: 4 (lower is better)
Translates to: HSCTWPGRPHNHGRRQRRSSSTE*PGQPQS
Trigger: ACTTTGCGGCTGCCCTGGTCACTCTGTGGAACTTGA...TCTCCTTTGCCTTCTGCCATGATTGTGAGGCCTCCCTGGCCATGTGCAACTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635811.1
CDS-3UTR TCA 90 bp AGAAGAAGGGGCTCCCACGGGCCAAACAAGCAGGACCTGAGCCTGAGAGTAAATCGGATTAAGTCGCCATaGCCACAAAGCCACGTGCGA +
Preference number: 4 (lower is better)
Translates to: RRRGSHGPNKQDLSLRVNRIKSP*PQSHVR
Trigger: TCGCACGTGGCTTTGTGGTCATGGCGACTTAATCCG...ATTTACTCTCAGGCTCAGGTCCTGCTTGTTTGGCCCGTGGGAGCCCCTTCTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294309.8
CDS-3UTR TCA 90 bp CTGGCCCCACTCCTGACATGTGGGGATCATTACAATTCAAGGCAAGATTTGGGTCCGGCTCCAGACTCCTaGATGCCCCGGAAGTCTGAC +
Preference number: 4 (lower is better)
Translates to: LAPLLTCGDHYNSRQDLGPAPDS*MPRKSD
Trigger: GTCAGACTTCCGGGGCATTCAGGAGTCTGGAGCCGG...ACCCAAATCTTGCCTTGAATTGTAATGATCCCCACATGTCAGGAGTGGGGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000635811.1
CDS-3UTR TCA 90 bp AGGCAAAGGAGAAGCAAGACACATCTTCCATGGGGGCAGGCAAGAGAGAGCATGTCCTGTCCTTTGACCTaGGGCCAAGAGCCTGCTCTG +
Preference number: 4 (lower is better)
Translates to: RQRRSKTHLPWGQARESMSCPLT*GQEPAL
Trigger: CAGAGCAGGCTCTTGGCCTCAGGTCAAAGGACAGGA...CATGCTCTCTCTTGCCTGCCCCCATGGAAGATGTGTCTTGCTTCTCCTTTGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000635811.1
ENST00000637342.1
ENST00000637504.1
CDS-3UTR TCA 90 bp AGGCAAAGGAGAAGCAAGACACATCTTCCATGGGGGCAGGCAAGAGAGAGCATGAGGACTCCTGTCCTTTaGCCTGAGGCCAAGAGCCTG +
Preference number: 4 (lower is better)
Translates to: RQRRSKTHLPWGQARESMRTPVL*PEAKSL
Trigger: CAGGCTCTTGGCCTCAGGTCAAAGGACAGGAGTCCT...CATGCTCTCTCTTGCCTGCCCCCATGGAAGATGTGTCTTGCTTCTCCTTTGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000635811.1
ENST00000637342.1
ENST00000637504.1
CDS-3UTR GCA 90 bp GTTCCTGTCCCCAGCTTAGTGGTCCGTCAGAGGAAAGGTCTCTTCCTGCCTGGCGCAGCGACCAGCGGATaGATTTCAAGGTCTTCTTCA +
Preference number: 4 (lower is better)
Translates to: VPVPSLVVRQRKGLFLPGAATSG*ISRSSS
Trigger: TGAAGAAGACCTTGAAATGCATCCGCTGGTCGCTGC...GCCAGGCAGGAAGAGACCTTTCCTCTGACGGACCACTAAGCTGGGGACAGGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294309.8
ENST00000542467.1
ENST00000635811.1
CDS-3UTR GCA 90 bp GTGGACGGGGATGTATGTGACTCACAACTTCATCGGGGCATGGAGAGTCTGTCCAGGAACTGGGCGCTCTaGAGAAACGGAGACTGGTAC +
Preference number: 4 (lower is better)
Translates to: VDGDVCDSQLHRGMESLSRNWAL*RNGDWY
Trigger: GTACCAGTCTCCGTTTCTGCAGAGCGCCCAGTTCCT...GGACAGACTCTCCATGCCCCGATGAAGTTGTGAGTCACATACATCCCCGTCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000635811.1
ENST00000637504.1
CDS-3UTR GCA 90 bp AAACCACCAGCATCCCCACCTGAATGCCCCGGAAGTCTGACGGTTAACCTGTGCGACAGGGGAGGCCGCTaGTTCTTGCATTTTTGTCTG +
Preference number: 4 (lower is better)
Translates to: KPPASPPECPGSLTVNLCDRGGR*FLHFCL
Trigger: CAGACAAAAATGCAAGAAGCAGCGGCCTCCCCTGTC...GCACAGGTTAACCGTCAGACTTCCGGGGCATTCAGGTGGGGATGCTGGTGGTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000294309.8
CDS-3UTR GCA 90 bp GACGGGGATGTATGTGACTCACAACTTCATCGGGGCATGGAGAGTCTGTCCACCAGCCTCCTGGGTCACTaGTGTTTCCAGGAAGAGCCA +
Preference number: 4 (lower is better)
Translates to: DGDVCDSQLHRGMESLSTSLLGH*CFQEEP
Trigger: TGGCTCTTCCTGGAAACAGCAGTGACCCAGGAGGCT...GGTGGACAGACTCTCCATGCCCCGATGAAGTTGTGAGTCACATACATCCCCGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637504.1
CDS-3UTR CCA 90 bp TCCTGTCCCCAGCTTAGTGGTCCGTCAGAGGAAAGGTCTCTTCCTGCCTGGCTGAGCCAAAGGTTTTTCTaGAAATGGGCCCACCCGAAC +
Preference number: 4 (lower is better)
Translates to: SCPQLSGPSEERSLPAWLSQRFF*KWAHPN
Trigger: GTTCGGGTGGGCCCATTTCCAGAAAAACCTTTGGCT...CAGCCAGGCAGGAAGAGACCTTTCCTCTGACGGACCACTAAGCTGGGGACAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294309.8
ENST00000542467.1
ENST00000635811.1
CDS-3UTR CCA 90 bp ATGAGGCAGGACCCTCAGCAGCATGTAGATTTTGCTGTTGCTGATTGTAAAGGCAGAGGCACAGGTGGATaGCCAGCAGCAGCCCGACGC +
Preference number: 4 (lower is better)
Translates to: MRQDPQQHVDFAVADCKGRGTGG*PAAARR
Trigger: GCGTCGGGCTGCTGCTGGCCATCCACCTGTGCCTCT...GCCTTTACAATCAGCAACAGCAAAATCTACATGCTGCTGAGGGTCCTGCCTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294309.8
CDS-3UTR CCA 90 bp TTCAATGATCTCCACCTGGCCCCACTCCTGACATGTGGGGATCATTACAATTCACGGGGTTGTTGGCCGTaGTCAGCAGCACCAGGAGGG +
Preference number: 4 (lower is better)
Translates to: FNDLHLAPLLTCGDHYNSRGCWP*SAAPGG
Trigger: CCCTCCTGGTGCTGCTGACCACGGCCAACAACCCCG...TGAATTGTAATGATCCCCACATGTCAGGAGTGGGGCCAGGTGGAGATCATTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000635811.1
ENST00000637342.1
ENST00000637504.1
CDS-3UTR CCA 90 bp ATGTGGGGATCATTACAATTCAAGGCAAGATTTGGGTGGGGACACAGCCCAATCCGGGGTTGTTGGCCGTaGTCAGCAGCACCAGGAGGG +
Preference number: 4 (lower is better)
Translates to: MWGSLQFKARFGWGHSPIRGCWP*SAAPGG
Trigger: CCCTCCTGGTGCTGCTGACCACGGCCAACAACCCCG...GATTGGGCTGTGTCCCCACCCAAATCTTGCCTTGAATTGTAATGATCCCCACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000635811.1
ENST00000637342.1
ENST00000637504.1
CDS-3UTR CCA 90 bp GGGTCAAGCACTGCTTTTTCTGCATTGCATTCACTGTGGGCTTCAGACACAGCATGCAGAAACGGAGACTaGTACTCGGGCCTCGGCGGG +
Preference number: 4 (lower is better)
Translates to: GSSTAFSALHSLWASDTACRNGD*YSGLGG
Trigger: CCCGCCGAGGCCCGAGTACCAGTCTCCGTTTCTGCA...TGCTGTGTCTGAAGCCCACAGTGAATGCAATGCAGAAAAAGCAGTGCTTGACCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000635811.1
ENST00000637342.1
ENST00000637504.1
CDS-3UTR CCA 90 bp CTGGCCCCACTCCTGACATGTGGGGATCATTACAATTCAAGGCAAGATTTGGGTTGCAGAAACGGAGACTaGTACTCGGGCCTCGGCGGG +
Preference number: 4 (lower is better)
Translates to: LAPLLTCGDHYNSRQDLGCRNGD*YSGLGG
Trigger: CCCGCCGAGGCCCGAGTACCAGTCTCCGTTTCTGCA...ACCCAAATCTTGCCTTGAATTGTAATGATCCCCACATGTCAGGAGTGGGGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000635811.1
ENST00000637342.1
ENST00000637504.1
CDS-3UTR CCA 90 bp GGTTCCTGTCCCCAGCTTAGTGGTCCGTCAGAGGAAAGGTCTCTTCCTGCCTGGCAGCTGTTCTGTAGATaGTTGTTGGGCCACACGCAA +
Preference number: 4 (lower is better)
Translates to: GSCPQLSGPSEERSLPAWQLFCR*LLGHTQ
Trigger: TTGCGTGTGGCCCAACAACCATCTACAGAACAGCTG...CCAGGCAGGAAGAGACCTTTCCTCTGACGGACCACTAAGCTGGGGACAGGAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294309.8
ENST00000542467.1
ENST00000635811.1
CDS-3UTR CCA 90 bp TGTGACACTCCTAGACGAAACGCAGACCCAGAACCTACCACAAGGAAACGTCACATCCCACAGGGGCTATaGCGTGGGCTCAGCACCTCT +
Preference number: 4 (lower is better)
Translates to: CDTPRRNADPEPTTRKRHIPQGL*RGLSTS
Trigger: AGAGGTGCTGAGCCCACGCCATAGCCCCTGTGGGAT...GTGACGTTTCCTTGTGGTAGGTTCTGGGTCTGCGTTTCGTCTAGGAGTGTCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294309.8
CDS-3UTR CCA 90 bp AAAGAAAGCGGAGGGCACGGCGCCTCCCTGAAGCACCAGCAGCTGTTCTGTAGAGCATTGCATTCACTGTaGGCTTCAGACACAGCAGAG +
Preference number: 4 (lower is better)
Translates to: KESGGHGASLKHQQLFCRALHSL*ASDTAE
Trigger: CTCTGCTGTGTCTGAAGCCCACAGTGAATGCAATGC...TCTACAGAACAGCTGCTGGTGCTTCAGGGAGGCGCCGTGCCCTCCGCTTTCTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635811.1
3UTR CAA 72 bp TCCCTGAAGCACCAGCAGCTGTTCTGTAGATGGTTGTaGGGCCACACGCAAAGGACTTGGTTCCTGTCCCCA +
Preference number: 4 (lower is better)
Translates to: SLKHQQLFCRWL*GHTQRTWFLSP
Trigger: TGGGGACAGGAACCAAGTCCTTTGCGTGTGGCCCAACAACCATCTACAGAACAGCTGCTGGTGCTTCAGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294309.8
ENST00000542467.1
ENST00000635811.1
CDS-3UTR TCA 90 bp CTCACTGAAGCAGCTATAAAAGAAAGCGGAGGGCACGGCGCCTCCCTGAAGCACGGATCAAGAAGATGGTaGAGCTCAAAGTCCGTTGGC +
Preference number: 4 (lower is better)
Translates to: LTEAAIKESGGHGASLKHGSRRW*SSKSVG
Trigger: GCCAACGGACTTTGAGCTTCACCATCTTCTTGATCC...GTGCTTCAGGGAGGCGCCGTGCCCTCCGCTTTCTTTTATAGCTGCTTCAGTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294309.8
ENST00000542467.1
ENST00000635811.1
CDS-3UTR TCA 90 bp GGGTCAAGCACTGCTTTTTCTGCATTGCATTCACTGTGGGCTTCAGACACAGCAATCCGCAGGGGCTCATaGCACACGAGACTCAGGGAC +
Preference number: 4 (lower is better)
Translates to: GSSTAFSALHSLWASDTAIRRGS*HTRLRD
Trigger: GTCCCTGAGTCTCGTGTGTCATGAGCCCCTGCGGAT...TGCTGTGTCTGAAGCCCACAGTGAATGCAATGCAGAAAAAGCAGTGCTTGACCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000635811.1
ENST00000637342.1
ENST00000637504.1
CDS-3UTR TCA 90 bp CCACAAGAACAGTACAGGGGAAACCACCCCCGTGATTCAATGATCTCCACCTGGTCCAGCTGGACCTTCTaGAGCACCTGCAGCAAGTTC +
Preference number: 4 (lower is better)
Translates to: PQEQYRGNHPRDSMISTWSSWTF*STCSKF
Trigger: GAACTTGCTGCAGGTGCTTCAGAAGGTCCAGCTGGA...CCAGGTGGAGATCATTGAATCACGGGGGTGGTTTCCCCTGTACTGTTCTTGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000635811.1
ENST00000637342.1
ENST00000637504.1
CDS-3UTR TCA 90 bp CTCACTGAAGCAGCTATAAAAGAAAGCGGAGGGCACGGCGCCTCCCTGAAGCACTCGTTGAAGAGCTTCTaGAACTCCTCAGCTGAGAGC +
Preference number: 4 (lower is better)
Translates to: LTEAAIKESGGHGASLKHSLKSF*NSSAES
Trigger: GCTCTCAGCTGAGGAGTTTCAGAAGCTCTTCAACGA...GTGCTTCAGGGAGGCGCCGTGCCCTCCGCTTTCTTTTATAGCTGCTTCAGTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294309.8
ENST00000542467.1
ENST00000635811.1
CDS-3UTR TCA 90 bp CCTGTCCCCAGCTTAGTGGTCCGTCAGAGGAAAGGTCTCTTCCTGCCTGGCTGGTTCTGTCAAGCTCGTTaGAGAGCTTCTGAAACTCCT +
Preference number: 4 (lower is better)
Translates to: PVPSLVVRQRKGLFLPGWFCQAR*RASETP
Trigger: AGGAGTTTCAGAAGCTCTTCAACGAGCTTGACAGAA...CCAGCCAGGCAGGAAGAGACCTTTCCTCTGACGGACCACTAAGCTGGGGACAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294309.8
ENST00000542467.1
ENST00000635811.1
CDS-3UTR TCA 90 bp AAAGAAAGCGGAGGGCACGGCGCCTCCCTGAAGCACCAGCAGCTGTTCTGTAGATCTTGCATTTTTGTCTaGAAGGTCCCTGTGGAGTCG +
Preference number: 4 (lower is better)
Translates to: KESGGHGASLKHQQLFCRSCIFV*KVPVES
Trigger: CGACTCCACAGGGACCTTTCAGACAAAAATGCAAGA...TCTACAGAACAGCTGCTGGTGCTTCAGGGAGGCGCCGTGCCCTCCGCTTTCTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294309.8
ENST00000635811.1
CDS-3UTR TCA 90 bp GTTCCTGTCCCCAGCTTAGTGGTCCGTCAGAGGAAAGGTCTCTTCCTGCCTGGCTCTTGCATTTTTGTCTaGAAGGTCCCTGTGGAGTCG +
Preference number: 4 (lower is better)
Translates to: VPVPSLVVRQRKGLFLPGSCIFV*KVPVES
Trigger: CGACTCCACAGGGACCTTTCAGACAAAAATGCAAGA...GCCAGGCAGGAAGAGACCTTTCCTCTGACGGACCACTAAGCTGGGGACAGGAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294309.8
ENST00000635811.1
CDS-3UTR TCA 90 bp AAAACCATTGGTCAATCTGGACCTGGCGTGCTTCAGGTGACAACAAGGCTTTCCACCAGCATCCCCACCTaGATGCCCCGGAAGTCTGAC +
Preference number: 4 (lower is better)
Translates to: KTIGQSGPGVLQVTTRLSTSIPT*MPRKSD
Trigger: GTCAGACTTCCGGGGCATTCAGGTGGGGATGCTGGT...GGAAAGCCTTGTTGTCACCTGAAGCACGCCAGGTCCAGATTGACCAATGGTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000294309.8
CDS-3UTR TCA 90 bp ATCCCACAGGGGCTATGGCGTGGGCTCAGCACCTCTGAAGGAAAAGCAGATGAATGGAAAGCTGTTTGCTaGAGGTTTTGGCAGCAGGGC +
Preference number: 4 (lower is better)
Translates to: IPQGLWRGLSTSEGKADEWKAVC*RFWQQG
Trigger: GCCCTGCTGCCAAAACCTTCAGCAAACAGCTTTCCA...TTCATCTGCTTTTCCTTCAGAGGTGCTGAGCCCACGCCATAGCCCCTGTGGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000294309.8
CDS-3UTR GCA 90 bp AGGCAAAGGAGAAGCAAGACACATCTTCCATGGGGGCAGGCAAGAGAGAGCATGAATGGACACCAGGTTTaGCAGGGCGATGAGGTTCCC +
Preference number: 4 (lower is better)
Translates to: RQRRSKTHLPWGQARESMNGHQV*QGDEVP
Trigger: GGGAACCTCATCGCCCTGGCAAACCTGGTGTCCATT...CATGCTCTCTCTTGCCTGCCCCCATGGAAGATGTGTCTTGCTTCTCCTTTGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000635811.1
ENST00000637342.1
ENST00000637504.1
CDS-3UTR GCA 90 bp GCAGGCCCCAGCCTTGACCCTGGCTTTCACGGTCCATTGGGTTTTGTTATAATTGCCCGTCAAACACGTTaGTGGGGTAGGACAGGTACC +
Preference number: 4 (lower is better)
Translates to: AGPSLDPGFHGPLGFVIIARQTR*WGRTGT
Trigger: GGTACCTGTCCTACCCCAGCAACGTGTTTGACGGGC...AATTATAACAAAACCCAATGGACCGTGAAAGCCAGGGTCAAGGCTGGGGCCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000635811.1
ENST00000637342.1
ENST00000637504.1
CDS-3UTR GCA 90 bp GGACACAGCCCAATCATATCAGGGATCCTAACCCCGGAGAAAACAAAGGGTCAATGGCAGGGGCCAGGCTaGTGTTTCCAGGAAGAGCCA +
Preference number: 4 (lower is better)
Translates to: GHSPIISGILTPEKTKGQWQGPG*CFQEEP
Trigger: TGGCTCTTCCTGGAAACAGCAGCCTGGCCCCTGCCA...TTGACCCTTTGTTTTCTCCGGGGTTAGGATCCCTGATATGATTGGGCTGTGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000635811.1
ENST00000637342.1
CDS-3UTR GCA 90 bp TTCATTCACTTGTGCCACAAACATTTATGGGACCACCTACTGAGTACCGGGTGCGCCCAGTACTCCAGCTaGTCGAAGCTCCCACAGGGC +
Preference number: 4 (lower is better)
Translates to: FIHLCHKHLWDHLLSTGCAQYSS*SKLPQG
Trigger: GCCCTGTGGGAGCTTCGAGCAGCTGGAGTACTGGGC...GCACCCGGTACTCAGTAGGTGGTCCCATAAATGTTTGTGGCACAAGTGAATGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635811.1
ENST00000637342.1
CDS-3UTR GCA 90 bp GGAGAAAACAAAGGGTCAAGCACTGCTTTTTCTGCATTGCATTCACTGTGGGCTGTGGTCCCCAAGGGCTaGCGGCAGCAAAGGCACCAC +
Preference number: 4 (lower is better)
Translates to: GENKGSSTAFSALHSLWAVVPKG*RQQRHH
Trigger: GTGGTGCCTTTGCTGCCGGCAGCCCTTGGGGACCAC...AGCCCACAGTGAATGCAATGCAGAAAAAGCAGTGCTTGACCCTTTGTTTTCTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000635811.1
CDS-3UTR CCA 90 bp TGTGACTCACAACTTCATCGGGGCATGGAGAGTCTGTCCACCACCGTCAGGAGCAGCCAAAGGTTTTTCTaGAAATGGGCCCACCCGAAC +
Preference number: 4 (lower is better)
Translates to: CDSQLHRGMESLSTTVRSSQRFF*KWAHPN
Trigger: GTTCGGGTGGGCCCATTTCCAGAAAAACCTTTGGCT...GCTCCTGACGGTGGTGGACAGACTCTCCATGCCCCGATGAAGTTGTGAGTCACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000635811.1
ENST00000637504.1
CDS-3UTR CCA 90 bp GGTTCCTGTCCCCAGCTTAGTGGTCCGTCAGAGGAAAGGTCTCTTCCTGCCTGGCATAGGCCCGGTTCTTaGAATACGCAGGAATCATCA +
Preference number: 4 (lower is better)
Translates to: GSCPQLSGPSEERSLPAWHRPGS*NTQESS
Trigger: TGATGATTCCTGCGTATTCCAAGAACCGGGCCTATG...CCAGGCAGGAAGAGACCTTTCCTCTGACGGACCACTAAGCTGGGGACAGGAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294309.8
ENST00000542467.1
ENST00000635811.1
CDS-3UTR CCA 90 bp TGTTCTGTAGATGGTTGTTGGGCCACACGCAAAGGACTTGGTTCCTGTCCCCAGATCATGGCCTGTTTGTaGGAGCTGTCCAGCTGGACC +
Preference number: 4 (lower is better)
Translates to: CSVDGCWATRKGLGSCPQIMACL*ELSSWT
Trigger: GGTCCAGCTGGACAGCTCCCACAAACAGGCCATGAT...CTGGGGACAGGAACCAAGTCCTTTGCGTGTGGCCCAACAACCATCTACAGAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294309.8
ENST00000542467.1
ENST00000635811.1
CDS-3UTR CCA 90 bp CACAGTTGCACATGGCCAGGGAGGCCTCACAATCATGGCAGAAGGCAAAGGAGAGCACCTTCTCCATCATaGCCTGTTTGTGGGAGCTGT +
Preference number: 4 (lower is better)
Translates to: HSCTWPGRPHNHGRRQRRAPSPS*PVCGSC
Trigger: ACAGCTCCCACAAACAGGCCATGATGGAGAAGGTGC...TCTCCTTTGCCTTCTGCCATGATTGTGAGGCCTCCCTGGCCATGTGCAACTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635811.1
ENST00000637504.1
CDS-3UTR CCA 90 bp AGCTGTTCTGTAGATGGTTGTTGGGCCACACGCAAAGGACTTGGTTCCTGTCCCCGTCAAACACGTTGCTaGGGTAGGACAGGTACCCTC +
Preference number: 4 (lower is better)
Translates to: SCSVDGCWATRKGLGSCPRQTRC*GRTGTL
Trigger: GAGGGTACCTGTCCTACCCCAGCAACGTGTTTGACG...GGGACAGGAACCAAGTCCTTTGCGTGTGGCCCAACAACCATCTACAGAACAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294309.8
ENST00000542467.1
ENST00000635811.1
CDS-3UTR CCA 90 bp CCCCAGCTTAGTGGTCCGTCAGAGGAAAGGTCTCTTCCTGCCTGGCTGGCCACAATACAAAATAGATCTTaGACCACGGGCCTGAGTAGC +
Preference number: 4 (lower is better)
Translates to: PQLSGPSEERSLPAWLATIQNRS*TTGLSS
Trigger: GCTACTCAGGCCCGTGGTCCAAGATCTATTTTGTAT...TGTGGCCAGCCAGGCAGGAAGAGACCTTTCCTCTGACGGACCACTAAGCTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294309.8
ENST00000635811.1
CDS-3UTR CCA 90 bp TTCAATGATCTCCACCTGGCCCCACTCCTGACATGTGGGGATCATTACAATTCACACAGGTGCGGGTGCTaGCTCAGCCTCTCTGTGAGC +
Preference number: 4 (lower is better)
Translates to: FNDLHLAPLLTCGDHYNSHRCGC*LSLSVS
Trigger: GCTCACAGAGAGGCTGAGCCAGCACCCGCACCTGTG...TGAATTGTAATGATCCCCACATGTCAGGAGTGGGGCCAGGTGGAGATCATTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635811.1
CDS-3UTR CCA 90 bp GTTCCTGTCCCCAGCTTAGTGGTCCGTCAGAGGAAAGGTCTCTTCCTGCCTGGCTCTGTAGATGGTTGTTaGGCCACACGCAAAGGACTT +
Preference number: 4 (lower is better)
Translates to: VPVPSLVVRQRKGLFLPGSVDGC*ATRKGL
Trigger: AAGTCCTTTGCGTGTGGCCCAACAACCATCTACAGA...GCCAGGCAGGAAGAGACCTTTCCTCTGACGGACCACTAAGCTGGGGACAGGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294309.8
ENST00000542467.1
ENST00000635811.1
CDS-3UTR CCA 90 bp GGTTCCTGTCCCCAGCTTAGTGGTCCGTCAGAGGAAAGGTCTCTTCCTGCCTGGTCTGTAGATGGTTGTTaGGCCACACGCAAAGGACTT +
Preference number: 4 (lower is better)
Translates to: GSCPQLSGPSEERSLPAWSVDGC*ATRKGL
Trigger: AAGTCCTTTGCGTGTGGCCCAACAACCATCTACAGA...CCAGGCAGGAAGAGACCTTTCCTCTGACGGACCACTAAGCTGGGGACAGGAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294309.8
ENST00000542467.1
ENST00000635811.1
CDS-3UTR CCA 90 bp ACTGAAGCAGCTATAAAAGAAAGCGGAGGGCACGGCGCCTCCCTGAAGCACCAGCGTACCCTGTGGTGCTaGGCTAAAATCGGAGGTATT +
Preference number: 4 (lower is better)
Translates to: TEAAIKESGGHGASLKHQRTLWC*AKIGGI
Trigger: AATACCTCCGATTTTAGCCCAGCACCACAGGGTACG...CTGGTGCTTCAGGGAGGCGCCGTGCCCTCCGCTTTCTTTTATAGCTGCTTCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294309.8
CDS-3UTR CCA 90 bp TGTTCTGTAGATGGTTGTTGGGCCACACGCAAAGGACTTGGTTCCTGTCCCCAGGCAGTGATGGGAGGCTaGGGACATGCAGGAAAACTG +
Preference number: 4 (lower is better)
Translates to: CSVDGCWATRKGLGSCPQAVMGG*GHAGKL
Trigger: CAGTTTTCCTGCATGTCCCCAGCCTCCCATCACTGC...CTGGGGACAGGAACCAAGTCCTTTGCGTGTGGCCCAACAACCATCTACAGAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294309.8
CDS-3UTR CCA 90 bp GAGTCTGTCCACCACCGTCAGGAGCATCGTGAGGAGTTGATGCTGTTCTGGGGAGAGGCCTCACAATCATaGCAGAAGGCAAAGGAGAAG +
Preference number: 4 (lower is better)
Translates to: ESVHHRQEHREELMLFWGEASQS*QKAKEK
Trigger: CTTCTCCTTTGCCTTCTGCCATGATTGTGAGGCCTC...TCCCCAGAACAGCATCAACTCCTCACGATGCTCCTGACGGTGGTGGACAGACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635811.1
ENST00000637504.1
CDS-3UTR TCA 90 bp AAAGGAGAAGCAAGACACATCTTCCATGGGGGCAGGCAAGAGAGAGCATGTGCCATGAAGACCACAGCCTaGTCAATGCAGAGGTCCCAC +
Preference number: 4 (lower is better)
Translates to: KGEARHIFHGGRQERACAMKTTA*SMQRSH
Trigger: GTGGGACCTCTGCATTGATCAGGCTGTGGTCTTCAT...GGCACATGCTCTCTCTTGCCTGCCCCCATGGAAGATGTGTCTTGCTTCTCCTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000635811.1
ENST00000637342.1
ENST00000637504.1
CDS-3UTR TCA 90 bp TTCATTCACTTGTGCCACAAACATTTATGGGACCACCTACTGAGTACCGGGTGCATCCGCAGGGGCTCATaGCACACGAGACTCAGGGAC +
Preference number: 4 (lower is better)
Translates to: FIHLCHKHLWDHLLSTGCIRRGS*HTRLRD
Trigger: GTCCCTGAGTCTCGTGTGTCATGAGCCCCTGCGGAT...GCACCCGGTACTCAGTAGGTGGTCCCATAAATGTTTGTGGCACAAGTGAATGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000635811.1
ENST00000637342.1
ENST00000637504.1
CDS-3UTR TCA 90 bp CTGACATGTGGGGATCATTACAATTCAAGGCAAGATTTGGGTGGGGACACAGCCGGTTTGCCAGGGCGATaGGGTTCCCCAGGTAGTCAA +
Preference number: 4 (lower is better)
Translates to: LTCGDHYNSRQDLGGDTAGLPGR*GSPGSQ
Trigger: TTGACTACCTGGGGAACCTCATCGCCCTGGCAAACC...GGCTGTGTCCCCACCCAAATCTTGCCTTGAATTGTAATGATCCCCACATGTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000635811.1
ENST00000637342.1
ENST00000637504.1
CDS-3UTR TCA 90 bp AAGGCAAAGGAGAAGCAAGACACATCTTCCATGGGGGCAGGCAAGAGAGAGCATTCAAGTTCCACAGAGTaGCCAGGGCAGCCGCAAAGT +
Preference number: 4 (lower is better)
Translates to: KAKEKQDTSSMGAGKREHSSSTE*PGQPQS
Trigger: ACTTTGCGGCTGCCCTGGTCACTCTGTGGAACTTGA...ATGCTCTCTCTTGCCTGCCCCCATGGAAGATGTGTCTTGCTTCTCCTTTGCCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000635811.1
ENST00000637342.1
CDS-3UTR TCA 90 bp AGCACAAAAACTCCCTCGATGACAGGGCCTCAGCAGGCCCCAGCCTTGACCCTGCGAGGGAATTCTCACTaGAGCAGCTATAAAAGAAAG +
Preference number: 4 (lower is better)
Translates to: STKTPSMTGPQQAPALTLRGNSH*SSYKRK
Trigger: CTTTCTTTTATAGCTGCTTCAGTGAGAATTCCCTCG...CAGGGTCAAGGCTGGGGCCTGCTGAGGCCCTGTCATCGAGGGAGTTTTTGTGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000635811.1
CDS-3UTR TCA 90 bp AGGGGTACACAGTGTGGGAGTCAAAGCCCCAGTCGGATGAGCAGGGCATCTCTGGTAAAAAGAAACTCATaGCCTTCTCCTTGGACTCGC +
Preference number: 4 (lower is better)
Translates to: RGTQCGSQSPSRMSRASLVKRNS*PSPWTR
Trigger: GCGAGTCCAAGGAGAAGGTCATGAGTTTCTTTTTAC...CAGAGATGCCCTGCTCATCCGACTGGGGCTTTGACTCCCACACTGTGTACCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000294309.8
CDS-3UTR GCA 90 bp GGAGAAAACAAAGGGTCAAGCACTGCTTTTTCTGCATTGCATTCACTGTGGGCTGGCCGACTTGGATGCTaGGGTAAGTGGTCAGCCCCG +
Preference number: 4 (lower is better)
Translates to: GENKGSSTAFSALHSLWAGRLGC*GKWSAP
Trigger: CGGGGCTGACCACTTACCGCAGCATCCAAGTCGGCC...AGCCCACAGTGAATGCAATGCAGAAAAAGCAGTGCTTGACCCTTTGTTTTCTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000635811.1
ENST00000637342.1
ENST00000637504.1
CDS-3UTR GCA 90 bp TTCAATGATCTCCACCTGGCCCCACTCCTGACATGTGGGGATCATTACAATTCACAGGGCCGACTTGGATaGTGCGGTAAGTGGTCAGCC +
Preference number: 4 (lower is better)
Translates to: FNDLHLAPLLTCGDHYNSQGRLG*CGKWSA
Trigger: GGCTGACCACTTACCGCAGCATCCAAGTCGGCCCTG...TGAATTGTAATGATCCCCACATGTCAGGAGTGGGGCCAGGTGGAGATCATTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000635811.1
ENST00000637342.1
ENST00000637504.1
CDS-3UTR GCA 90 bp ATGTGGGGATCATTACAATTCAAGGCAAGATTTGGGTGGGGACACAGCCCAATCCCACAGCCTGATCAATaGAGAGGTCCCACCTGGCCG +
Preference number: 4 (lower is better)
Translates to: MWGSLQFKARFGWGHSPIPQPDQ*RGPTWP
Trigger: CGGCCAGGTGGGACCTCTGCATTGATCAGGCTGTGG...GATTGGGCTGTGTCCCCACCCAAATCTTGCCTTGAATTGTAATGATCCCCACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000635811.1
ENST00000637342.1
ENST00000637504.1
CDS-3UTR GCA 90 bp AATCATATCAGGGATCCTAACCCCGGAGAAAACAAAGGGTCAAGCACTGCTTTTCTGCACAGCCACAGGTaGGGGTGCTGGCTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: NHIRDPNPGENKGSSTAFLHSHR*GCWLSL
Trigger: GAGGCTGAGCCAGCACCCGCACCTGTGGCTGTGCAG...AAAAGCAGTGCTTGACCCTTTGTTTTCTCCGGGGTTAGGATCCCTGATATGATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000635811.1
CDS-3UTR GCA 90 bp CTTCTTGCATTTTTGTCTGAAAGGTCCCTGTGGAGTCGACGAGGGAATTCTCACCTGACGGTTAACCTGTaGAGGCCCTGGTCAGGCCTG +
Preference number: 4 (lower is better)
Translates to: LLAFLSERSLWSRRGNSHLTVNL*RPWSGL
Trigger: CAGGCCTGACCAGGGCCTGCACAGGTTAACCGTCAG...GTGAGAATTCCCTCGTCGACTCCACAGGGACCTTTCAGACAAAAATGCAAGAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294309.8
ENST00000635811.1
CDS-3UTR GCA 90 bp TCCCACAGGGGCTATGGCGTGGGCTCAGCACCTCTGAAGGAAAAGCAGATGAAAAGCCATGTGCCCTTGTaGAATGCACAACCCAAGCAA +
Preference number: 4 (lower is better)
Translates to: SHRGYGVGSAPLKEKQMKSHVPL*NAQPKQ
Trigger: TTGCTTGGGTTGTGCATTGCACAAGGGCACATGGCT...TTTCATCTGCTTTTCCTTCAGAGGTGCTGAGCCCACGCCATAGCCCCTGTGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000294309.8
CDS-3UTR GCA 90 bp GGAGAAAACAAAGGGTCAAGCACTGCTTTTTCTGCATTGCATTCACTGTGGGCTGGGCTACACGGGCCCTaGACCAGGGCAGTCATCATC +
Preference number: 4 (lower is better)
Translates to: GENKGSSTAFSALHSLWAGLHGP*TRAVII
Trigger: GATGATGACTGCCCTGGTGCAGGGCCCGTGTAGCCC...AGCCCACAGTGAATGCAATGCAGAAAAAGCAGTGCTTGACCCTTTGTTTTCTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000635811.1
ENST00000637342.1
ENST00000637504.1
CDS-3UTR GCA 90 bp CCAATCATATCAGGGATCCTAACCCCGGAGAAAACAAAGGGTCAAGCACTGCTTCTGAGGCCAAGAGCCTaGTCTGACCCCTTGTCACCC +
Preference number: 4 (lower is better)
Translates to: PIISGILTPEKTKGQALLLRPRA*SDPLSP
Trigger: GGGTGACAAGGGGTCAGAGCAGGCTCTTGGCCTCAG...AAGCAGTGCTTGACCCTTTGTTTTCTCCGGGGTTAGGATCCCTGATATGATTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000635811.1
ENST00000637342.1
ENST00000637504.1
CDS-3UTR GCA 90 bp ACCAGCACAAAAACTCCCTCGATGACAGGGCCTCAGCAGGCCCCAGCCTTGACCCAAAGGGTCAAGCACTaGTTTTTCTGCATTGCATTC +
Preference number: 4 (lower is better)
Translates to: TSTKTPSMTGPQQAPALTQRVKH*FFCIAF
Trigger: GAATGCAATGCAGAAAAAGCAGTGCTTGACCCTTTG...GGTCAAGGCTGGGGCCTGCTGAGGCCCTGTCATCGAGGGAGTTTTTGTGCTGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000635811.1
ENST00000637342.1
ENST00000637504.1
CDS-3UTR CCA 90 bp AAACCACCAGCATCCCCACCTGAATGCCCCGGAAGTCTGACGGTTAACCTGTGCCATAGGCCCGGTTCTTaGAATACGCAGGAATCATCA +
Preference number: 4 (lower is better)
Translates to: KPPASPPECPGSLTVNLCHRPGS*NTQESS
Trigger: TGATGATTCCTGCGTATTCCAAGAACCGGGCCTATG...GCACAGGTTAACCGTCAGACTTCCGGGGCATTCAGGTGGGGATGCTGGTGGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294309.8
CDS-3UTR CCA 90 bp CTGGCCCCACTCCTGACATGTGGGGATCATTACAATTCAAGGCAAGATTTGGGTACCTGCAGCAAGTTCTaGGGCTTCACCCCAACTGCC +
Preference number: 4 (lower is better)
Translates to: LAPLLTCGDHYNSRQDLGTCSKF*GFTPTA
Trigger: GGCAGTTGGGGTGAAGCCCCAGAACTTGCTGCAGGT...ACCCAAATCTTGCCTTGAATTGTAATGATCCCCACATGTCAGGAGTGGGGCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000635811.1
ENST00000637342.1
ENST00000637504.1
CDS-3UTR CCA 90 bp TCCCACAGGGGCTATGGCGTGGGCTCAGCACCTCTGAAGGAAAAGCAGATGAAAAGTCATCGAAGTTGTTaGCCCAGTACTCCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: SHRGYGVGSAPLKEKQMKSHRSC*PSTPAA
Trigger: AGCAGCTGGAGTACTGGGCCAACAACTTCGATGACT...TTTCATCTGCTTTTCCTTCAGAGGTGCTGAGCCCACGCCATAGCCCCTGTGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000294309.8
CDS-3UTR CCA 90 bp GGTTCCAAGTTCATTCACTTGTGCCACAAACATTTATGGGACCACCTACTGAGTCTGGTAGGTGGCCTCTaGGGTCCCAGCAAGGGGCTG +
Preference number: 4 (lower is better)
Translates to: GSKFIHLCHKHLWDHLLSLVGGL*GPSKGL
Trigger: CAGCCCCTTGCTGGGACCCCAGAGGCCACCTACCAG...ACTCAGTAGGTGGTCCCATAAATGTTTGTGGCACAAGTGAATGAACTTGGAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635811.1
CDS-3UTR CCA 90 bp GGTTCCTGTCCCCAGCTTAGTGGTCCGTCAGAGGAAAGGTCTCTTCCTGCCTGGGAAAGAGAGAAAAACTaGAACGTACCCTGTGGTGCT +
Preference number: 4 (lower is better)
Translates to: GSCPQLSGPSEERSLPAWEREKN*NVPCGA
Trigger: AGCACCACAGGGTACGTTCCAGTTTTTCTCTCTTTC...CCAGGCAGGAAGAGACCTTTCCTCTGACGGACCACTAAGCTGGGGACAGGAACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000294309.8
CDS-3UTR CCA 90 bp CTCACTGAAGCAGCTATAAAAGAAAGCGGAGGGCACGGCGCCTCCCTGAAGCACCTCCTGGGTGCTGGGTaGATAATGTTCTTTGCTGTA +
Preference number: 4 (lower is better)
Translates to: LTEAAIKESGGHGASLKHLLGAG*IMFFAV
Trigger: TACAGCAAAGAACATTATCCACCCAGCACCCAGGAG...GTGCTTCAGGGAGGCGCCGTGCCCTCCGCTTTCTTTTATAGCTGCTTCAGTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635811.1
CDS-3UTR CCA 90 bp CAAACATTTATGGGACCACCTACTGAGTACCGGGTGCTGTGGACGGGGATGTATAACTTCATCGGGGCATaGAGAGTCTGTCCACCACCG +
Preference number: 4 (lower is better)
Translates to: QTFMGPPTEYRVLWTGMYNFIGA*RVCPPP
Trigger: CGGTGGTGGACAGACTCTCCATGCCCCGATGAAGTT...ATACATCCCCGTCCACAGCACCCGGTACTCAGTAGGTGGTCCCATAAATGTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000635811.1
ENST00000637342.1
ENST00000637504.1
3UTR CAA 72 bp GATGGGGAGTGGTGTCCCCGGAGTTGTTTCTGGGAGTaGCTGGGTCCACCTTACCTTAAATGTAGTCAACCA +
Preference number: 4 (lower is better)
Translates to: DGEWCPRSCFWE*LGPPYLKCSQP
Trigger: TGGTTGACTACATTTAAGGTAAGGTGGACCCAGCAACTCCCAGAAACAACTCCGGGGACACCACTCCCCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294309.8
3UTR CAA 72 bp GGCCCTGACAGTGACAACTTCCATTTGGAAAGCTGTTaGCTGAAGGTTTTGGCAGCAGGGCGTCCACACAAG +
Preference number: 4 (lower is better)
Translates to: GPDSDNFHLESC*LKVLAAGRPHK
Trigger: CTTGTGTGGACGCCCTGCTGCCAAAACCTTCAGCAAACAGCTTTCCAAATGGAAGTTGTCACTGTCAGGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294309.8
CDS-3UTR TCA 90 bp TTGTGCCACAAACATTTATGGGACCACCTACTGAGTACCGGGTGCTGTGGACGGGGATCAAGAAGATGGTaGAGCTCAAAGTCCGTTGGC +
Preference number: 4 (lower is better)
Translates to: LCHKHLWDHLLSTGCCGRGSRRW*SSKSVG
Trigger: GCCAACGGACTTTGAGCTTCACCATCTTCTTGATCC...CCGTCCACAGCACCCGGTACTCAGTAGGTGGTCCCATAAATGTTTGTGGCACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000635811.1
ENST00000637342.1
ENST00000637504.1
CDS-3UTR TCA 90 bp CTGGCCCCACTCCTGACATGTGGGGATCATTACAATTCAAGGCAAGATTTGGGTGCATTCCGAACATGGTaGAGAGGCACAGGTGGATGG +
Preference number: 4 (lower is better)
Translates to: LAPLLTCGDHYNSRQDLGAFRTW*RGTGGW
Trigger: CCATCCACCTGTGCCTCTTCACCATGTTCGGAATGC...ACCCAAATCTTGCCTTGAATTGTAATGATCCCCACATGTCAGGAGTGGGGCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000635811.1
ENST00000637342.1
ENST00000637504.1
CDS-3UTR TCA 90 bp AGCTGTTCTGTAGATGGTTGTTGGGCCACACGCAAAGGACTTGGTTCCTGTCCCGGAACTGACTGTAGATaGTGGCTGTCAGCAGGTTCA +
Preference number: 4 (lower is better)
Translates to: SCSVDGCWATRKGLGSCPGTDCR*WLSAGS
Trigger: TGAACCTGCTGACAGCCATCATCTACAGTCAGTTCC...GGGACAGGAACCAAGTCCTTTGCGTGTGGCCCAACAACCATCTACAGAACAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294309.8
ENST00000542467.1
ENST00000635811.1
CDS-3UTR TCA 90 bp TGTTCTGTAGATGGTTGTTGGGCCACACGCAAAGGACTTGGTTCCTGTCCCCAGTCGTTGAAGAGCTTCTaGAACTCCTCAGCTGAGAGC +
Preference number: 4 (lower is better)
Translates to: CSVDGCWATRKGLGSCPQSLKSF*NSSAES
Trigger: GCTCTCAGCTGAGGAGTTTCAGAAGCTCTTCAACGA...CTGGGGACAGGAACCAAGTCCTTTGCGTGTGGCCCAACAACCATCTACAGAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294309.8
ENST00000542467.1
ENST00000635811.1
CDS-3UTR TCA 90 bp GTTCCTGTCCCCAGCTTAGTGGTCCGTCAGAGGAAAGGTCTCTTCCTGCCTGGCAGAACTGTGCTGAAGTaGAGAATGACAATCCCATTC +
Preference number: 4 (lower is better)
Translates to: VPVPSLVVRQRKGLFLPGRTVLK*RMTIPF
Trigger: GAATGGGATTGTCATTCTTCACTTCAGCACAGTTCT...GCCAGGCAGGAAGAGACCTTTCCTCTGACGGACCACTAAGCTGGGGACAGGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294309.8
CDS-3UTR TCA 90 bp ATGTGGGGATCATTACAATTCAAGGCAAGATTTGGGTGGGGACACAGCCCAATCTCTGGGGACTCCACGTaGGAGCCTCCTGGGTCAATA +
Preference number: 4 (lower is better)
Translates to: MWGSLQFKARFGWGHSPISGDST*EPPGSI
Trigger: TATTGACCCAGGAGGCTCTCACGTGGAGTCCCCAGA...GATTGGGCTGTGTCCCCACCCAAATCTTGCCTTGAATTGTAATGATCCCCACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000635811.1
CDS-3UTR GCA 90 bp AGCTGTTCTGTAGATGGTTGTTGGGCCACACGCAAAGGACTTGGTTCCTGTCCCCTGAGAGCAGAACACTaGCATAGGAACGCACCTTCT +
Preference number: 4 (lower is better)
Translates to: SCSVDGCWATRKGLGSCPLRAEH*HRNAPS
Trigger: AGAAGGTGCGTTCCTATGGCAGTGTTCTGCTCTCAG...GGGACAGGAACCAAGTCCTTTGCGTGTGGCCCAACAACCATCTACAGAACAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294309.8
ENST00000542467.1
ENST00000635811.1
CDS-3UTR GCA 90 bp AAAGGTCTCTTCCTGCCTGGCTGGCCACAGCATGGCCGCCTCTTCCATGACGGGACTTTTCTCCAAGTTTaGGGTGGTTTCCATATTGTT +
Preference number: 4 (lower is better)
Translates to: KGLFLPGWPQHGRLFHDGTFLQV*GGFHIV
Trigger: AACAATATGGAAACCACCGCAAACTTGGAGAAAAGT...CCCGTCATGGAAGAGGCGGCCATGCTGTGGCCAGCCAGGCAGGAAGAGACCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294309.8
CDS-3UTR CCA 90 bp TTGTGCCACAAACATTTATGGGACCACCTACTGAGTACCGGGTGCTGTGGACGGAGCCAAAGGTTTTTCTaGAAATGGGCCCACCCGAAC +
Preference number: 4 (lower is better)
Translates to: LCHKHLWDHLLSTGCCGRSQRFF*KWAHPN
Trigger: GTTCGGGTGGGCCCATTTCCAGAAAAACCTTTGGCT...CCGTCCACAGCACCCGGTACTCAGTAGGTGGTCCCATAAATGTTTGTGGCACAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000635811.1
ENST00000637342.1
ENST00000637504.1
CDS-3UTR CCA 90 bp CAAACATTTATGGGACCACCTACTGAGTACCGGGTGCTGTGGACGGGGATGTATGCACCTTCTCCATCATaGCCTGTTTGTGGGAGCTGT +
Preference number: 4 (lower is better)
Translates to: QTFMGPPTEYRVLWTGMYAPSPS*PVCGSC
Trigger: ACAGCTCCCACAAACAGGCCATGATGGAGAAGGTGC...ATACATCCCCGTCCACAGCACCCGGTACTCAGTAGGTGGTCCCATAAATGTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000635811.1
ENST00000637342.1
ENST00000637504.1
CDS-3UTR CCA 90 bp CTGACATGTGGGGATCATTACAATTCAAGGCAAGATTTGGGTGGGGACACAGCCCGTCAAACACGTTGCTaGGGTAGGACAGGTACCCTC +
Preference number: 4 (lower is better)
Translates to: LTCGDHYNSRQDLGGDTARQTRC*GRTGTL
Trigger: GAGGGTACCTGTCCTACCCCAGCAACGTGTTTGACG...GGCTGTGTCCCCACCCAAATCTTGCCTTGAATTGTAATGATCCCCACATGTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000635811.1
ENST00000637342.1
ENST00000637504.1
CDS-3UTR CCA 90 bp GGTTCCAAGTTCATTCACTTGTGCCACAAACATTTATGGGACCACCTACTGAGTCTCCGGCCTCCAGCCTaGGTGTGGCAATCGGTACAC +
Preference number: 4 (lower is better)
Translates to: GSKFIHLCHKHLWDHLLSLRPPA*VWQSVH
Trigger: GTGTACCGATTGCCACACCCAGGCTGGAGGCCGGAG...ACTCAGTAGGTGGTCCCATAAATGTTTGTGGCACAAGTGAATGAACTTGGAACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637342.1
CDS-3UTR CCA 90 bp AAAACCATTGGTCAATCTGGACCTGGCGTGCTTCAGGTGACAACAAGGCTTTCCGAGTGTGATGGGGAGTaGTGTCCCCGGAGTTGTTTC +
Preference number: 4 (lower is better)
Translates to: KTIGQSGPGVLQVTTRLSECDGE*CPRSCF
Trigger: GAAACAACTCCGGGGACACCACTCCCCATCACACTC...GGAAAGCCTTGTTGTCACCTGAAGCACGCCAGGTCCAGATTGACCAATGGTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000294309.8
CDS-3UTR CCA 90 bp CCATCCTGTGACACTCCTAGACGAAACGCAGACCCAGAACCTACCACAAGGAAACTGGAACGTACCCTGTaGTGCTGGGCTAAAATCGGA +
Preference number: 4 (lower is better)
Translates to: PSCDTPRRNADPEPTTRKLERTL*CWAKIG
Trigger: TCCGATTTTAGCCCAGCACCACAGGGTACGTTCCAG...TTTCCTTGTGGTAGGTTCTGGGTCTGCGTTTCGTCTAGGAGTGTCACAGGATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294309.8
CDS-3UTR CCA 90 bp TTGTGCCACAAACATTTATGGGACCACCTACTGAGTACCGGGTGCTGTGGACGGCACGTGAGAGCCTCCTaGGTCAATATTCATAGGGCA +
Preference number: 4 (lower is better)
Translates to: LCHKHLWDHLLSTGCCGRHVRAS*VNIHRA
Trigger: TGCCCTATGAATATTGACCCAGGAGGCTCTCACGTG...CCGTCCACAGCACCCGGTACTCAGTAGGTGGTCCCATAAATGTTTGTGGCACAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635811.1
CDS-3UTR CCA 90 bp CCACTAGATGGATGGTTCCAAGTTCATTCACTTGTGCCACAAACATTTATGGGACAGGCCTGCTCCTCCTaGAGGCCCCTCATCCCCAGT +
Preference number: 4 (lower is better)
Translates to: PLDGWFQVHSLVPQTFMGQACSS*RPLIPS
Trigger: ACTGGGGATGAGGGGCCTCCAGGAGGAGCAGGCCTG...TCCCATAAATGTTTGTGGCACAAGTGAATGAACTTGGAACCATCCATCTAGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000635811.1
ENST00000637342.1
ENST00000637504.1
CDS-3UTR CCA 90 bp TTCAATGATCTCCACCTGGCCCCACTCCTGACATGTGGGGATCATTACAATTCACACGTGAGAGCCTCCTaGGTCACTGCTGTTTCCAGG +
Preference number: 4 (lower is better)
Translates to: FNDLHLAPLLTCGDHYNSHVRAS*VTAVSR
Trigger: CCTGGAAACAGCAGTGACCCAGGAGGCTCTCACGTG...TGAATTGTAATGATCCCCACATGTCAGGAGTGGGGCCAGGTGGAGATCATTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637504.1
CDS-3UTR TCA 90 bp GGAGAAAACAAAGGGTCAAGCACTGCTTTTTCTGCATTGCATTCACTGTGGGCTCGCCGTGCTGGTGAGTaGGGATGGGGTCTCGATAAA +
Preference number: 4 (lower is better)
Translates to: GENKGSSTAFSALHSLWARRAGE*GWGLDK
Trigger: TTTATCGAGACCCCATCCTCACTCACCAGCACGGCG...AGCCCACAGTGAATGCAATGCAGAAAAAGCAGTGCTTGACCCTTTGTTTTCTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000635811.1
ENST00000637342.1
ENST00000637504.1
CDS-3UTR TCA 90 bp GACGGGGATGTATGTGACTCACAACTTCATCGGGGCATGGAGAGTCTGTCCACCTTCTGTCAAGCTCGTTaGAGAGCTTCTGAAACTCCT +
Preference number: 4 (lower is better)
Translates to: DGDVCDSQLHRGMESLSTFCQAR*RASETP
Trigger: AGGAGTTTCAGAAGCTCTTCAACGAGCTTGACAGAA...GGTGGACAGACTCTCCATGCCCCGATGAAGTTGTGAGTCACATACATCCCCGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000635811.1
ENST00000637504.1
CDS-3UTR TCA 90 bp CCAATCATATCAGGGATCCTAACCCCGGAGAAAACAAAGGGTCAAGCACTGCTTGCTTCATGCTGGGGATaGTACGCAGGAAGCGGAACA +
Preference number: 4 (lower is better)
Translates to: PIISGILTPEKTKGQALLASCWG*YAGSGT
Trigger: TGTTCCGCTTCCTGCGTATCATCCCCAGCATGAAGC...AAGCAGTGCTTGACCCTTTGTTTTCTCCGGGGTTAGGATCCCTGATATGATTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000635811.1
ENST00000637342.1
ENST00000637504.1
CDS-3UTR TCA 90 bp GGAGAAAACAAAGGGTCAAGCACTGCTTTTTCTGCATTGCATTCACTGTGGGCTAGGACTCCTGTCCTTTaGCCTGAGGCCAAGAGCCTG +
Preference number: 4 (lower is better)
Translates to: GENKGSSTAFSALHSLWARTPVL*PEAKSL
Trigger: CAGGCTCTTGGCCTCAGGTCAAAGGACAGGAGTCCT...AGCCCACAGTGAATGCAATGCAGAAAAAGCAGTGCTTGACCCTTTGTTTTCTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000635811.1
ENST00000637342.1
ENST00000637504.1
CDS-3UTR GCA 90 bp TGGTTCCAAGTTCATTCACTTGTGCCACAAACATTTATGGGACCACCTACTGAGCAGGGCCGACTTGGATaGTGCGGTAAGTGGTCAGCC +
Preference number: 4 (lower is better)
Translates to: WFQVHSLVPQTFMGPPTEQGRLG*CGKWSA
Trigger: GGCTGACCACTTACCGCAGCATCCAAGTCGGCCCTG...CTCAGTAGGTGGTCCCATAAATGTTTGTGGCACAAGTGAATGAACTTGGAACCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000635811.1
ENST00000637342.1
ENST00000637504.1
CDS-3UTR GCA 90 bp CAAACATTTATGGGACCACCTACTGAGTACCGGGTGCTGTGGACGGGGATGTATGCAGCGACCAGCGGATaGATTTCAAGGTCTTCTTCA +
Preference number: 4 (lower is better)
Translates to: QTFMGPPTEYRVLWTGMYAATSG*ISRSSS
Trigger: TGAAGAAGACCTTGAAATGCATCCGCTGGTCGCTGC...ATACATCCCCGTCCACAGCACCCGGTACTCAGTAGGTGGTCCCATAAATGTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000635811.1
ENST00000637342.1
ENST00000637504.1
CDS-3UTR GCA 90 bp CCACTAGATGGATGGTTCCAAGTTCATTCACTTGTGCCACAAACATTTATGGGAGGGCTTCACCCCAACTaGCTGAGGGAAGGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: PLDGWFQVHSLVPQTFMGGLHPN*LREGSS
Trigger: GGAGGAGCCTTCCCTCAGGCAGTTGGGGTGAAGCCC...TCCCATAAATGTTTGTGGCACAAGTGAATGAACTTGGAACCATCCATCTAGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000635811.1
ENST00000637342.1
ENST00000637504.1
CDS-3UTR GCA 90 bp TTCAATGATCTCCACCTGGCCCCACTCCTGACATGTGGGGATCATTACAATTCAAGGAACTGGGCGCTCTaGAGAAACGGAGACTGGTAC +
Preference number: 4 (lower is better)
Translates to: FNDLHLAPLLTCGDHYNSRNWAL*RNGDWY
Trigger: GTACCAGTCTCCGTTTCTGCAGAGCGCCCAGTTCCT...TGAATTGTAATGATCCCCACATGTCAGGAGTGGGGCCAGGTGGAGATCATTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000635811.1
ENST00000637342.1
ENST00000637504.1
CDS-3UTR GCA 90 bp CCAATCATATCAGGGATCCTAACCCCGGAGAAAACAAAGGGTCAAGCACTGCTTAGGAACTGGGCGCTCTaGAGAAACGGAGACTGGTAC +
Preference number: 4 (lower is better)
Translates to: PIISGILTPEKTKGQALLRNWAL*RNGDWY
Trigger: GTACCAGTCTCCGTTTCTGCAGAGCGCCCAGTTCCT...AAGCAGTGCTTGACCCTTTGTTTTCTCCGGGGTTAGGATCCCTGATATGATTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000635811.1
ENST00000637342.1
ENST00000637504.1
CDS-3UTR GCA 90 bp TTCAATGATCTCCACCTGGCCCCACTCCTGACATGTGGGGATCATTACAATTCACTCCAGACTCCTGAATaGCCCGGAAGTCTGACGGTT +
Preference number: 4 (lower is better)
Translates to: FNDLHLAPLLTCGDHYNSLQTPE*PGSLTV
Trigger: AACCGTCAGACTTCCGGGGCATTCAGGAGTCTGGAG...TGAATTGTAATGATCCCCACATGTCAGGAGTGGGGCCAGGTGGAGATCATTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635811.1
CDS-3UTR GCA 90 bp TGTTCTGTAGATGGTTGTTGGGCCACACGCAAAGGACTTGGTTCCTGTCCCCAGTTCTTTGCTGTAATCTaGTCCTTCCGAGGGTGCCTT +
Preference number: 4 (lower is better)
Translates to: CSVDGCWATRKGLGSCPQFFAVI*SFRGCL
Trigger: AAGGCACCCTCGGAAGGAGCAGATTACAGCAAAGAA...CTGGGGACAGGAACCAAGTCCTTTGCGTGTGGCCCAACAACCATCTACAGAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635811.1
CDS-3UTR CCA 90 bp GGAGAAAACAAAGGGTCAAGCACTGCTTTTTCTGCATTGCATTCACTGTGGGCTTCACATCGGGGTTGTTaGCCGTGGTCAGCAGCACCA +
Preference number: 4 (lower is better)
Translates to: GENKGSSTAFSALHSLWASHRGC*PWSAAP
Trigger: TGGTGCTGCTGACCACGGCCAACAACCCCGATGTGA...AGCCCACAGTGAATGCAATGCAGAAAAAGCAGTGCTTGACCCTTTGTTTTCTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000635811.1
ENST00000637342.1
ENST00000637504.1
CDS-3UTR CCA 90 bp ATGTGGGGATCATTACAATTCAAGGCAAGATTTGGGTGGGGACACAGCCCAATCATCATGGCCTGTTTGTaGGAGCTGTCCAGCTGGACC +
Preference number: 4 (lower is better)
Translates to: MWGSLQFKARFGWGHSPIIMACL*ELSSWT
Trigger: GGTCCAGCTGGACAGCTCCCACAAACAGGCCATGAT...GATTGGGCTGTGTCCCCACCCAAATCTTGCCTTGAATTGTAATGATCCCCACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000635811.1
ENST00000637342.1
ENST00000637504.1
CDS-3UTR CCA 90 bp AAAACCATTGGTCAATCTGGACCTGGCGTGCTTCAGGTGACAACAAGGCTTTCCGCACCTTCTCCATCATaGCCTGTTTGTGGGAGCTGT +
Preference number: 4 (lower is better)
Translates to: KTIGQSGPGVLQVTTRLSAPSPS*PVCGSC
Trigger: ACAGCTCCCACAAACAGGCCATGATGGAGAAGGTGC...GGAAAGCCTTGTTGTCACCTGAAGCACGCCAGGTCCAGATTGACCAATGGTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294309.8
CDS-3UTR CCA 90 bp CCAATCATATCAGGGATCCTAACCCCGGAGAAAACAAAGGGTCAAGCACTGCTTCCAGGAACACGCAAATaGACACCAGGTTTGCCAGGG +
Preference number: 4 (lower is better)
Translates to: PIISGILTPEKTKGQALLPGTRK*TPGLPG
Trigger: CCCTGGCAAACCTGGTGTCCATTTGCGTGTTCCTGG...AAGCAGTGCTTGACCCTTTGTTTTCTCCGGGGTTAGGATCCCTGATATGATTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000635811.1
ENST00000637342.1
ENST00000637504.1
CDS-3UTR CCA 90 bp GGCGTGCTTCAGGTGACAACAAGGCTTTCCACACACTGCTCGCTCGCCCCACCTTCTCCAAGTTTGCGGTaGTTTCCATATTGTTATTGT +
Preference number: 4 (lower is better)
Translates to: GVLQVTTRLSTHCSLAPPSPSLR*FPYCYC
Trigger: ACAATAACAATATGGAAACCACCGCAAACTTGGAGA...AGGTGGGGCGAGCGAGCAGTGTGTGGAAAGCCTTGTTGTCACCTGAAGCACGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294309.8
CDS-3UTR CCA 90 bp ATGTGGGGATCATTACAATTCAAGGCAAGATTTGGGTGGGGACACAGCCCAATCGAGTTGATGCTGTTCTaGGGACTCCACGTGAGAGCC +
Preference number: 4 (lower is better)
Translates to: MWGSLQFKARFGWGHSPIELMLF*GLHVRA
Trigger: GGCTCTCACGTGGAGTCCCCAGAACAGCATCAACTC...GATTGGGCTGTGTCCCCACCCAAATCTTGCCTTGAATTGTAATGATCCCCACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000635811.1
ENST00000637342.1
ENST00000637504.1
CDS-3UTR CCA 90 bp AGCACAAAAACTCCCTCGATGACAGGGCCTCAGCAGGCCCCAGCCTTGACCCTGTTTCCACTAGATGGATaGTTCCAAGTTCATTCACTT +
Preference number: 4 (lower is better)
Translates to: STKTPSMTGPQQAPALTLFPLDG*FQVHSL
Trigger: AAGTGAATGAACTTGGAACCATCCATCTAGTGGAAA...CAGGGTCAAGGCTGGGGCCTGCTGAGGCCCTGTCATCGAGGGAGTTTTTGTGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000635811.1
ENST00000637342.1
ENST00000637504.1
CDS-3UTR CCA 90 bp AAGGCAAAGGAGAAGCAAGACACATCTTCCATGGGGGCAGGCAAGAGAGAGCATGCATTGCATTCACTGTaGGCTTCAGACACAGCAGAG +
Preference number: 4 (lower is better)
Translates to: KAKEKQDTSSMGAGKREHALHSL*ASDTAE
Trigger: CTCTGCTGTGTCTGAAGCCCACAGTGAATGCAATGC...ATGCTCTCTCTTGCCTGCCCCCATGGAAGATGTGTCTTGCTTCTCCTTTGCCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000635811.1
ENST00000637342.1
ENST00000637504.1
3UTR CAA 72 bp GACAACTTCCATTTGGAAAGCTGTTTGCTGAAGGTTTaGGCAGCAGGGCGTCCACACAAGAGGGGTACACAG +
Preference number: 4 (lower is better)
Translates to: DNFHLESCLLKV*AAGRPHKRGTQ
Trigger: CTGTGTACCCCTCTTGTGTGGACGCCCTGCTGCCAAAACCTTCAGCAAACAGCTTTCCAAATGGAAGTTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294309.8
CDS-3UTR TCA 90 bp CCAATCATATCAGGGATCCTAACCCCGGAGAAAACAAAGGGTCAAGCACTGCTTATGAAGACCACAGCCTaGTCAATGCAGAGGTCCCAC +
Preference number: 4 (lower is better)
Translates to: PIISGILTPEKTKGQALLMKTTA*SMQRSH
Trigger: GTGGGACCTCTGCATTGATCAGGCTGTGGTCTTCAT...AAGCAGTGCTTGACCCTTTGTTTTCTCCGGGGTTAGGATCCCTGATATGATTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000635811.1
ENST00000637342.1
ENST00000637504.1
CDS-3UTR TCA 90 bp TTCATTCACTTGTGCCACAAACATTTATGGGACCACCTACTGAGTACCGGGTGCATGAAGACCACAGCCTaGTCAATGCAGAGGTCCCAC +
Preference number: 4 (lower is better)
Translates to: FIHLCHKHLWDHLLSTGCMKTTA*SMQRSH
Trigger: GTGGGACCTCTGCATTGATCAGGCTGTGGTCTTCAT...GCACCCGGTACTCAGTAGGTGGTCCCATAAATGTTTGTGGCACAAGTGAATGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000635811.1
ENST00000637342.1
ENST00000637504.1
CDS-3UTR TCA 90 bp GGACACAGCCCAATCATATCAGGGATCCTAACCCCGGAGAAAACAAAGGGTCAAGGAACTGACTGTAGATaGTGGCTGTCAGCAGGTTCA +
Preference number: 4 (lower is better)
Translates to: GHSPIISGILTPEKTKGQGTDCR*WLSAGS
Trigger: TGAACCTGCTGACAGCCATCATCTACAGTCAGTTCC...TTGACCCTTTGTTTTCTCCGGGGTTAGGATCCCTGATATGATTGGGCTGTGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000635811.1
ENST00000637342.1
ENST00000637504.1
CDS-3UTR TCA 90 bp GGACACAGCCCAATCATATCAGGGATCCTAACCCCGGAGAAAACAAAGGGTCAATCGTTGAAGAGCTTCTaGAACTCCTCAGCTGAGAGC +
Preference number: 4 (lower is better)
Translates to: GHSPIISGILTPEKTKGQSLKSF*NSSAES
Trigger: GCTCTCAGCTGAGGAGTTTCAGAAGCTCTTCAACGA...TTGACCCTTTGTTTTCTCCGGGGTTAGGATCCCTGATATGATTGGGCTGTGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000635811.1
ENST00000637342.1
ENST00000637504.1
CDS-3UTR TCA 90 bp ACAGGAAATAAGGTCACCCATTGGCTTATACATGCCTTTGAGCAAAACAGAAAAGGCACGGCGCCTCCCTaGAGCACCAGCAGCTGTTCT +
Preference number: 4 (lower is better)
Translates to: TGNKVTHWLIHAFEQNRKGTAPP*STSSCS
Trigger: AGAACAGCTGCTGGTGCTTCAGGGAGGCGCCGTGCC...TTTTCTGTTTTGCTCAAAGGCATGTATAAGCCAATGGGTGACCTTATTTCCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294309.8
CDS-3UTR TCA 90 bp ATCCCACAGGGGCTATGGCGTGGGCTCAGCACCTCTGAAGGAAAAGCAGATGAACGAGGGAATTCTCACTaGAGCAGCTATAAAAGAAAG +
Preference number: 4 (lower is better)
Translates to: IPQGLWRGLSTSEGKADERGNSH*SSYKRK
Trigger: CTTTCTTTTATAGCTGCTTCAGTGAGAATTCCCTCG...TTCATCTGCTTTTCCTTCAGAGGTGCTGAGCCCACGCCATAGCCCCTGTGGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000294309.8
CDS-3UTR TCA 90 bp TTAAGGAGAATGAGAACCATTCCCAGAAAGGGCCTTACAGCTATGGAAAGAGAGAATGCCCCGGAAGTCTaGCGGTTAACCTGTGCAGGC +
Preference number: 4 (lower is better)
Translates to: LRRMRTIPRKGLTAMERENAPEV*RLTCAG
Trigger: GCCTGCACAGGTTAACCGTCAGACTTCCGGGGCATT...CTCTCTTTCCATAGCTGTAAGGCCCTTTCTGGGAATGGTTCTCATTCTCCTTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294309.8
CDS-3UTR TCA 90 bp TCCCACAGGGGCTATGGCGTGGGCTCAGCACCTCTGAAGGAAAAGCAGATGAAATATCATTCCCAGCTGTaGATAGATGAGACAGAGAGA +
Preference number: 4 (lower is better)
Translates to: SHRGYGVGSAPLKEKQMKYHSQL*IDETER
Trigger: TCTCTCTGTCTCATCTATTCACAGCTGGGAATGATA...TTTCATCTGCTTTTCCTTCAGAGGTGCTGAGCCCACGCCATAGCCCCTGTGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294309.8
CDS-3UTR GCA 90 bp CTCCATTCAAAAGAACAGGTCTTCTTAGAGCTGCAGCTCACTCCAATAAATGAAGGCCGACTTGGATGCTaGGGTAAGTGGTCAGCCCCG +
Preference number: 4 (lower is better)
Translates to: LHSKEQVFLELQLTPINEGRLGC*GKWSAP
Trigger: CGGGGCTGACCACTTACCGCAGCATCCAAGTCGGCC...TTCATTTATTGGAGTGAGCTGCAGCTCTAAGAAGACCTGTTCTTTTGAATGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294309.8
CDS-3UTR GCA 90 bp TTAAGGAGAATGAGAACCATTCCCAGAAAGGGCCTTACAGCTATGGAAAGAGAGAACGCACGCATGTTCTaGACCAGGCCCAGGACGGTA +
Preference number: 4 (lower is better)
Translates to: LRRMRTIPRKGLTAMERENARMF*TRPRTV
Trigger: TACCGTCCTGGGCCTGGTGCAGAACATGCGTGCGTT...CTCTCTTTCCATAGCTGTAAGGCCCTTTCTGGGAATGGTTCTCATTCTCCTTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294309.8
CDS-3UTR GCA 90 bp TGGTTCCAAGTTCATTCACTTGTGCCACAAACATTTATGGGACCACCTACTGAGAACGCACGCATGTTCTaGACCAGGCCCAGGACGGTA +
Preference number: 4 (lower is better)
Translates to: WFQVHSLVPQTFMGPPTENARMF*TRPRTV
Trigger: TACCGTCCTGGGCCTGGTGCAGAACATGCGTGCGTT...CTCAGTAGGTGGTCCCATAAATGTTTGTGGCACAAGTGAATGAACTTGGAACCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000635811.1
ENST00000637342.1
ENST00000637504.1
CDS-3UTR GCA 90 bp TTCAATGATCTCCACCTGGCCCCACTCCTGACATGTGGGGATCATTACAATTCAGACAGGGGAGGCCGCTaGTTCTTGCATTTTTGTCTG +
Preference number: 4 (lower is better)
Translates to: FNDLHLAPLLTCGDHYNSDRGGR*FLHFCL
Trigger: CAGACAAAAATGCAAGAAGCAGCGGCCTCCCCTGTC...TGAATTGTAATGATCCCCACATGTCAGGAGTGGGGCCAGGTGGAGATCATTGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000635811.1
CDS-3UTR GCA 90 bp AAAACCATTGGTCAATCTGGACCTGGCGTGCTTCAGGTGACAACAAGGCTTTCCGCTTATCTCCAGAAGTaGCAAGGTCGTCTAAGCCCA +
Preference number: 4 (lower is better)
Translates to: KTIGQSGPGVLQVTTRLSAYLQK*QGRLSP
Trigger: TGGGCTTAGACGACCTTGGCACTTCTGGAGATAAGC...GGAAAGCCTTGTTGTCACCTGAAGCACGCCAGGTCCAGATTGACCAATGGTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294309.8
CDS-3UTR CCA 90 bp AAAACCATTGGTCAATCTGGACCTGGCGTGCTTCAGGTGACAACAAGGCTTTCCAGCCAAAGGTTTTTCTaGAAATGGGCCCACCCGAAC +
Preference number: 4 (lower is better)
Translates to: KTIGQSGPGVLQVTTRLSSQRFF*KWAHPN
Trigger: GTTCGGGTGGGCCCATTTCCAGAAAAACCTTTGGCT...GGAAAGCCTTGTTGTCACCTGAAGCACGCCAGGTCCAGATTGACCAATGGTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000294309.8
CDS-3UTR CCA 90 bp TTTACAATTTCCACTAGATGGATGGTTCCAAGTTCATTCACTTGTGCCACAAACCGGGGTTGTTGGCCGTaGTCAGCAGCACCAGGAGGG +
Preference number: 4 (lower is better)
Translates to: FTISTRWMVPSSFTCATNRGCWP*SAAPGG
Trigger: CCCTCCTGGTGCTGCTGACCACGGCCAACAACCCCG...GTTTGTGGCACAAGTGAATGAACTTGGAACCATCCATCTAGTGGAAATTGTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000635811.1
ENST00000637342.1
ENST00000637504.1
CDS-3UTR CCA 90 bp ATGTGGGGATCATTACAATTCAAGGCAAGATTTGGGTGGGGACACAGCCCAATCGCACCTTCTCCATCATaGCCTGTTTGTGGGAGCTGT +
Preference number: 4 (lower is better)
Translates to: MWGSLQFKARFGWGHSPIAPSPS*PVCGSC
Trigger: ACAGCTCCCACAAACAGGCCATGATGGAGAAGGTGC...GATTGGGCTGTGTCCCCACCCAAATCTTGCCTTGAATTGTAATGATCCCCACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000635811.1
ENST00000637342.1
ENST00000637504.1
CDS-3UTR CCA 90 bp CAATTTCCACTAGATGGATGGTTCCAAGTTCATTCACTTGTGCCACAAACATTTCAGGCCTGCTCCTCCTaGAGGCCCCTCATCCCCAGT +
Preference number: 4 (lower is better)
Translates to: QFPLDGWFQVHSLVPQTFQACSS*RPLIPS
Trigger: ACTGGGGATGAGGGGCCTCCAGGAGGAGCAGGCCTG...AAATGTTTGTGGCACAAGTGAATGAACTTGGAACCATCCATCTAGTGGAAATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000635811.1
ENST00000637342.1
ENST00000637504.1
CDS-3UTR CCA 90 bp GGACACAGCCCAATCATATCAGGGATCCTAACCCCGGAGAAAACAAAGGGTCAAGCATTGCATTCACTGTaGGCTTCAGACACAGCAGAG +
Preference number: 4 (lower is better)
Translates to: GHSPIISGILTPEKTKGQALHSL*ASDTAE
Trigger: CTCTGCTGTGTCTGAAGCCCACAGTGAATGCAATGC...TTGACCCTTTGTTTTCTCCGGGGTTAGGATCCCTGATATGATTGGGCTGTGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000635811.1
ENST00000637342.1
ENST00000637504.1
CDS-3UTR CCA 90 bp AAGGCAAAGGAGAAGCAAGACACATCTTCCATGGGGGCAGGCAAGAGAGAGCATAAGGCAAGATTTGGGTaGGGACACAGCCCAATCATA +
Preference number: 4 (lower is better)
Translates to: KAKEKQDTSSMGAGKREHKARFG*GHSPII
Trigger: TATGATTGGGCTGTGTCCCCACCCAAATCTTGCCTT...ATGCTCTCTCTTGCCTGCCCCCATGGAAGATGTGTCTTGCTTCTCCTTTGCCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000635811.1
ENST00000637342.1
ENST00000637504.1
CDS-3UTR CCA 90 bp CAAACATTTATGGGACCACCTACTGAGTACCGGGTGCTGTGGACGGGGATGTATATTCAAGGCAAGATTTaGGTGGGGACACAGCCCAAT +
Preference number: 4 (lower is better)
Translates to: QTFMGPPTEYRVLWTGMYIQGKI*VGTQPN
Trigger: ATTGGGCTGTGTCCCCACCCAAATCTTGCCTTGAAT...ATACATCCCCGTCCACAGCACCCGGTACTCAGTAGGTGGTCCCATAAATGTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000635811.1
ENST00000637342.1
ENST00000637504.1
CDS-3UTR TCA 90 bp TTCAATGATCTCCACCTGGCCCCACTCCTGACATGTGGGGATCATTACAATTCATCGTTGAAGAGCTTCTaGAACTCCTCAGCTGAGAGC +
Preference number: 4 (lower is better)
Translates to: FNDLHLAPLLTCGDHYNSSLKSF*NSSAES
Trigger: GCTCTCAGCTGAGGAGTTTCAGAAGCTCTTCAACGA...TGAATTGTAATGATCCCCACATGTCAGGAGTGGGGCCAGGTGGAGATCATTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000635811.1
ENST00000637342.1
ENST00000637504.1
CDS-3UTR TCA 90 bp TTAAAGGAAAGAAGTTTAATTGACTCACAGTTGCACATGGCCAGGGAGGCCTCACCAGGGCAAAGACCTTaGGCAGCATCTCCAACAGGT +
Preference number: 4 (lower is better)
Translates to: LKERSLIDSQLHMAREASPGQRP*AASPTG
Trigger: ACCTGTTGGAGATGCTGCTCAAGGTCTTTGCCCTGG...TGAGGCCTCCCTGGCCATGTGCAACTGTGAGTCAATTAAACTTCTTTCCTTTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637504.1
CDS-3UTR TCA 90 bp AGCCTTGACCCTGGCTTTCACGGTCCATTGGGTTTTGTTATAATTTACAATTTCCCAGCAGGACAACGGTaGGGAGCCCGTCAAACACGT +
Preference number: 4 (lower is better)
Translates to: SLDPGFHGPLGFVIIYNFPAGQR*GARQTR
Trigger: ACGTGTTTGACGGGCTCCTCACCGTTGTCCTGCTGG...GAAATTGTAAATTATAACAAAACCCAATGGACCGTGAAAGCCAGGGTCAAGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000635811.1
ENST00000637342.1
ENST00000637504.1
CDS-3UTR TCA 90 bp TTAAGGAGAATGAGAACCATTCCCAGAAAGGGCCTTACAGCTATGGAAAGAGAGGCTTCATGCTGGGGATaGTACGCAGGAAGCGGAACA +
Preference number: 4 (lower is better)
Translates to: LRRMRTIPRKGLTAMEREASCWG*YAGSGT
Trigger: TGTTCCGCTTCCTGCGTATCATCCCCAGCATGAAGC...CTCTCTTTCCATAGCTGTAAGGCCCTTTCTGGGAATGGTTCTCATTCTCCTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294309.8
CDS-3UTR TCA 90 bp TTAAGGAGAATGAGAACCATTCCCAGAAAGGGCCTTACAGCTATGGAAAGAGAGCGGGGGTCCCACTTGTaGAGGAAGTTCTCCAGAATC +
Preference number: 4 (lower is better)
Translates to: LRRMRTIPRKGLTAMERERGSHL*RKFSRI
Trigger: GATTCTGGAGAACTTCCTTCACAAGTGGGACCCCCG...CTCTCTTTCCATAGCTGTAAGGCCCTTTCTGGGAATGGTTCTCATTCTCCTTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000294309.8
CDS-3UTR TCA 90 bp TGTTCTGTAGATGGTTGTTGGGCCACACGCAAAGGACTTGGTTCCTGTCCCCAGACGTTGGGAACATTCTaGTTCTTCTCTTCTAGCTGT +
Preference number: 4 (lower is better)
Translates to: CSVDGCWATRKGLGSCPQTLGTF*FFSSSC
Trigger: ACAGCTAGAAGAGAAGAATCAGAATGTTCCCAACGT...CTGGGGACAGGAACCAAGTCCTTTGCGTGTGGCCCAACAACCATCTACAGAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635811.1
CDS-3UTR GCA 90 bp ATGTGGGGATCATTACAATTCAAGGCAAGATTTGGGTGGGGACACAGCCCAATCCTGAGAGCAGAACACTaGCATAGGAACGCACCTTCT +
Preference number: 4 (lower is better)
Translates to: MWGSLQFKARFGWGHSPILRAEH*HRNAPS
Trigger: AGAAGGTGCGTTCCTATGGCAGTGTTCTGCTCTCAG...GATTGGGCTGTGTCCCCACCCAAATCTTGCCTTGAATTGTAATGATCCCCACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000635811.1
ENST00000637342.1
ENST00000637504.1
CDS-3UTR GCA 90 bp AATCATATCAGGGATCCTAACCCCGGAGAAAACAAAGGGTCAAGCACTGCTTTTAATGGACACCAGGTTTaGCAGGGCGATGAGGTTCCC +
Preference number: 4 (lower is better)
Translates to: NHIRDPNPGENKGSSTAFNGHQV*QGDEVP
Trigger: GGGAACCTCATCGCCCTGGCAAACCTGGTGTCCATT...AAAAGCAGTGCTTGACCCTTTGTTTTCTCCGGGGTTAGGATCCCTGATATGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000635811.1
ENST00000637342.1
ENST00000637504.1
CDS-3UTR GCA 90 bp AAAACCATTGGTCAATCTGGACCTGGCGTGCTTCAGGTGACAACAAGGCTTTCCGTTGTTTCTGGGAGTTaGTGGGTCCACCTTACCTTA +
Preference number: 4 (lower is better)
Translates to: KTIGQSGPGVLQVTTRLSVVSGS*WVHLTL
Trigger: TAAGGTAAGGTGGACCCAGCAACTCCCAGAAACAAC...GGAAAGCCTTGTTGTCACCTGAAGCACGCCAGGTCCAGATTGACCAATGGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294309.8
CDS-3UTR GCA 90 bp AATTTACAATTTCCACTAGATGGATGGTTCCAAGTTCATTCACTTGTGCCACAATGCTCCTTCCGAGGGTaGCTTCCCACTGGCCGCCCT +
Preference number: 4 (lower is better)
Translates to: NLQFPLDGWFQVHSLVPQCSFRG*LPTGRP
Trigger: AGGGCGGCCAGTGGGAAGGCACCCTCGGAAGGAGCA...TTGTGGCACAAGTGAATGAACTTGGAACCATCCATCTAGTGGAAATTGTAAATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635811.1
CDS-3UTR GCA 90 bp AAGGCAAAGGAGAAGCAAGACACATCTTCCATGGGGGCAGGCAAGAGAGAGCATCTGCTTTTTCTGCATTaGATTCACTGTGGGCTTCAG +
Preference number: 4 (lower is better)
Translates to: KAKEKQDTSSMGAGKREHLLFLH*IHCGLQ
Trigger: CTGAAGCCCACAGTGAATGCAATGCAGAAAAAGCAG...ATGCTCTCTCTTGCCTGCCCCCATGGAAGATGTGTCTTGCTTCTCCTTTGCCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000635811.1
ENST00000637342.1
ENST00000637504.1
CDS-3UTR GCA 90 bp CAAACATTTATGGGACCACCTACTGAGTACCGGGTGCTGTGGACGGGGATGTATCTGCTTTTTCTGCATTaGATTCACTGTGGGCTTCAG +
Preference number: 4 (lower is better)
Translates to: QTFMGPPTEYRVLWTGMYLLFLH*IHCGLQ
Trigger: CTGAAGCCCACAGTGAATGCAATGCAGAAAAAGCAG...ATACATCCCCGTCCACAGCACCCGGTACTCAGTAGGTGGTCCCATAAATGTTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000635811.1
ENST00000637342.1
ENST00000637504.1
CDS-3UTR CCA 90 bp CTTTCACGGTCCATTGGGTTTTGTTATAATTTACAATTTCCACTAGATGGATGGAGAGGCACAGGTGGATaGCCAGCAGCAGCCCGACGC +
Preference number: 4 (lower is better)
Translates to: LSRSIGFCYNLQFPLDGWRGTGG*PAAARR
Trigger: GCGTCGGGCTGCTGCTGGCCATCCACCTGTGCCTCT...CCATCCATCTAGTGGAAATTGTAAATTATAACAAAACCCAATGGACCGTGAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000635811.1
ENST00000637342.1
ENST00000637504.1
CDS-3UTR CCA 90 bp AGCCTTGACCCTGGCTTTCACGGTCCATTGGGTTTTGTTATAATTTACAATTTCCCTCCAGCCTGGGTGTaGCAATCGGTACACAGCCAG +
Preference number: 4 (lower is better)
Translates to: SLDPGFHGPLGFVIIYNFPPAWV*QSVHSQ
Trigger: CTGGCTGTGTACCGATTGCCACACCCAGGCTGGAGG...GAAATTGTAAATTATAACAAAACCCAATGGACCGTGAAAGCCAGGGTCAAGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637342.1
CDS-3UTR CCA 90 bp AATTTACAATTTCCACTAGATGGATGGTTCCAAGTTCATTCACTTGTGCCACAAGGCCCAGGACGGTACTaGCCACCACGGCCATCAGCT +
Preference number: 4 (lower is better)
Translates to: NLQFPLDGWFQVHSLVPQGPGRY*PPRPSA
Trigger: AGCTGATGGCCGTGGTGGCCAGTACCGTCCTGGGCC...TTGTGGCACAAGTGAATGAACTTGGAACCATCCATCTAGTGGAAATTGTAAATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000635811.1
ENST00000637342.1
ENST00000637504.1
CDS-3UTR CCA 90 bp CATTCCCAGAAAGGGCCTTACAGCTATGGAAAGAGAGAAAAACTGGAACGTACCACAACCTGGGAGCCATaGGCTTATCTCCAGAAGTGC +
Preference number: 4 (lower is better)
Translates to: HSQKGPYSYGKREKLERTTTWEP*AYLQKC
Trigger: GCACTTCTGGAGATAAGCCCATGGCTCCCAGGTTGT...GGTACGTTCCAGTTTTTCTCTCTTTCCATAGCTGTAAGGCCCTTTCTGGGAATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000294309.8
CDS-3UTR CCA 90 bp GGTTCCAAGTTCATTCACTTGTGCCACAAACATTTATGGGACCACCTACTGAGTAACTTCATCGGGGCATaGAGAGTCTGTCCACCACCG +
Preference number: 4 (lower is better)
Translates to: GSKFIHLCHKHLWDHLLSNFIGA*RVCPPP
Trigger: CGGTGGTGGACAGACTCTCCATGCCCCGATGAAGTT...ACTCAGTAGGTGGTCCCATAAATGTTTGTGGCACAAGTGAATGAACTTGGAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000635811.1
ENST00000637342.1
ENST00000637504.1
CDS-3UTR CCA 90 bp GAGTCTGTCCACCACCGTCAGGAGCATCGTGAGGAGTTGATGCTGTTCTGGGGATTTCCACTAGATGGATaGTTCCAAGTTCATTCACTT +
Preference number: 4 (lower is better)
Translates to: ESVHHRQEHREELMLFWGFPLDG*FQVHSL
Trigger: AAGTGAATGAACTTGGAACCATCCATCTAGTGGAAA...TCCCCAGAACAGCATCAACTCCTCACGATGCTCCTGACGGTGGTGGACAGACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635811.1
ENST00000637504.1
CDS-3UTR CCA 90 bp CTGACATGTGGGGATCATTACAATTCAAGGCAAGATTTGGGTGGGGACACAGCCAAGGCAAGATTTGGGTaGGGACACAGCCCAATCATA +
Preference number: 4 (lower is better)
Translates to: LTCGDHYNSRQDLGGDTAKARFG*GHSPII
Trigger: TATGATTGGGCTGTGTCCCCACCCAAATCTTGCCTT...GGCTGTGTCCCCACCCAAATCTTGCCTTGAATTGTAATGATCCCCACATGTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000635811.1
ENST00000637342.1
ENST00000637504.1
3UTR CAA 72 bp GCTGATTGTAAAGGCCCTGACAGTGACAACTTCCATTaGGAAAGCTGTTTGCTGAAGGTTTTGGCAGCAGGG +
Preference number: 4 (lower is better)
Translates to: ADCKGPDSDNFH*ESCLLKVLAAG
Trigger: CCCTGCTGCCAAAACCTTCAGCAAACAGCTTTCCAAATGGAAGTTGTCACTGTCAGGGCCTTTACAATCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294309.8
CDS-3UTR TCA 90 bp AGCCTTGACCCTGGCTTTCACGGTCCATTGGGTTTTGTTATAATTTACAATTTCGGTTTGCCAGGGCGATaGGGTTCCCCAGGTAGTCAA +
Preference number: 4 (lower is better)
Translates to: SLDPGFHGPLGFVIIYNFGLPGR*GSPGSQ
Trigger: TTGACTACCTGGGGAACCTCATCGCCCTGGCAAACC...GAAATTGTAAATTATAACAAAACCCAATGGACCGTGAAAGCCAGGGTCAAGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000635811.1
ENST00000637342.1
ENST00000637504.1
CDS-3UTR TCA 90 bp ACAGGAAATAAGGTCACCCATTGGCTTATACATGCCTTTGAGCAAAACAGAAAACCAGCAGGACAACGGTaGGGAGCCCGTCAAACACGT +
Preference number: 4 (lower is better)
Translates to: TGNKVTHWLIHAFEQNRKPAGQR*GARQTR
Trigger: ACGTGTTTGACGGGCTCCTCACCGTTGTCCTGCTGG...TTTTCTGTTTTGCTCAAAGGCATGTATAAGCCAATGGGTGACCTTATTTCCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294309.8
CDS-3UTR TCA 90 bp TTTACAATTTCCACTAGATGGATGGTTCCAAGTTCATTCACTTGTGCCACAAACCCAGCAGGACAACGGTaGGGAGCCCGTCAAACACGT +
Preference number: 4 (lower is better)
Translates to: FTISTRWMVPSSFTCATNPAGQR*GARQTR
Trigger: ACGTGTTTGACGGGCTCCTCACCGTTGTCCTGCTGG...GTTTGTGGCACAAGTGAATGAACTTGGAACCATCCATCTAGTGGAAATTGTAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000635811.1
ENST00000637342.1
ENST00000637504.1
CDS-3UTR TCA 90 bp AGCCTTGACCCTGGCTTTCACGGTCCATTGGGTTTTGTTATAATTTACAATTTCGGAAGCGGAACACGATaGGCATGTTCAGCATGCGGG +
Preference number: 4 (lower is better)
Translates to: SLDPGFHGPLGFVIIYNFGSGTR*ACSACG
Trigger: CCCGCATGCTGAACATGCTCATCGTGTTCCGCTTCC...GAAATTGTAAATTATAACAAAACCCAATGGACCGTGAAAGCCAGGGTCAAGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000635811.1
ENST00000637342.1
ENST00000637504.1
CDS-3UTR TCA 90 bp AAAACCATTGGTCAATCTGGACCTGGCGTGCTTCAGGTGACAACAAGGCTTTCCAAAGTAAAGGCAGTTTaGCAGGGATGGGATATTGGC +
Preference number: 4 (lower is better)
Translates to: KTIGQSGPGVLQVTTRLSKVKAV*QGWDIG
Trigger: GCCAATATCCCATCCCTGTCAAACTGCCTTTACTTT...GGAAAGCCTTGTTGTCACCTGAAGCACGCCAGGTCCAGATTGACCAATGGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294309.8
CDS-3UTR TCA 90 bp CAAACATTTATGGGACCACCTACTGAGTACCGGGTGCTGTGGACGGGGATGTATGGAAAGAAGTTTAATTaGCTCACAGTTGCACATGGC +
Preference number: 4 (lower is better)
Translates to: QTFMGPPTEYRVLWTGMYGKKFN*LTVAHG
Trigger: GCCATGTGCAACTGTGAGTCAATTAAACTTCTTTCC...ATACATCCCCGTCCACAGCACCCGGTACTCAGTAGGTGGTCCCATAAATGTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637504.1
CDS-3UTR GCA 90 bp AGCCTTGACCCTGGCTTTCACGGTCCATTGGGTTTTGTTATAATTTACAATTTCAACGCACGCATGTTCTaGACCAGGCCCAGGACGGTA +
Preference number: 4 (lower is better)
Translates to: SLDPGFHGPLGFVIIYNFNARMF*TRPRTV
Trigger: TACCGTCCTGGGCCTGGTGCAGAACATGCGTGCGTT...GAAATTGTAAATTATAACAAAACCCAATGGACCGTGAAAGCCAGGGTCAAGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000635811.1
ENST00000637342.1
ENST00000637504.1
CDS-3UTR GCA 90 bp CTCCATTCAAAAGAACAGGTCTTCTTAGAGCTGCAGCTCACTCCAATAAATGAAGCATCCCCACCTGAATaGCCCGGAAGTCTGACGGTT +
Preference number: 4 (lower is better)
Translates to: LHSKEQVFLELQLTPINEASPPE*PGSLTV
Trigger: AACCGTCAGACTTCCGGGGCATTCAGGTGGGGATGC...TTCATTTATTGGAGTGAGCTGCAGCTCTAAGAAGACCTGTTCTTTTGAATGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294309.8
CDS-3UTR GCA 90 bp TTAAGGAGAATGAGAACCATTCCCAGAAAGGGCCTTACAGCTATGGAAAGAGAGGGGAGGCTGGGGACATaGAGGAAAACTGACCCAATA +
Preference number: 4 (lower is better)
Translates to: LRRMRTIPRKGLTAMEREGRLGT*RKTDPI
Trigger: TATTGGGTCAGTTTTCCTGCATGTCCCCAGCCTCCC...CTCTCTTTCCATAGCTGTAAGGCCCTTTCTGGGAATGGTTCTCATTCTCCTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000294309.8
CDS-3UTR GCA 90 bp AAGGCAAAGGAGAAGCAAGACACATCTTCCATGGGGGCAGGCAAGAGAGAGCATGTGGATAATGTTCTTTaGTGTAATCTGCTCCTTCCG +
Preference number: 4 (lower is better)
Translates to: KAKEKQDTSSMGAGKREHVDNVL*CNLLLP
Trigger: CGGAAGGAGCAGATTACAGCAAAGAACATTATCCAC...ATGCTCTCTCTTGCCTGCCCCCATGGAAGATGTGTCTTGCTTCTCCTTTGCCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635811.1
CDS-3UTR GCA 90 bp CTGGCCCCACTCCTGACATGTGGGGATCATTACAATTCAAGGCAAGATTTGGGTCTGCTTTTTCTGCATTaGATTCACTGTGGGCTTCAG +
Preference number: 4 (lower is better)
Translates to: LAPLLTCGDHYNSRQDLGLLFLH*IHCGLQ
Trigger: CTGAAGCCCACAGTGAATGCAATGCAGAAAAAGCAG...ACCCAAATCTTGCCTTGAATTGTAATGATCCCCACATGTCAGGAGTGGGGCCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000635811.1
ENST00000637342.1
ENST00000637504.1
CDS-3UTR CCA 90 bp AGCCTTGACCCTGGCTTTCACGGTCCATTGGGTTTTGTTATAATTTACAATTTCACCTGCAGCAAGTTCTaGGGCTTCACCCCAACTGCC +
Preference number: 4 (lower is better)
Translates to: SLDPGFHGPLGFVIIYNFTCSKF*GFTPTA
Trigger: GGCAGTTGGGGTGAAGCCCCAGAACTTGCTGCAGGT...GAAATTGTAAATTATAACAAAACCCAATGGACCGTGAAAGCCAGGGTCAAGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000635811.1
ENST00000637342.1
ENST00000637504.1
CDS-3UTR CCA 90 bp CTCCATTCAAAAGAACAGGTCTTCTTAGAGCTGCAGCTCACTCCAATAAATGAATGGCCGAAGAGGAACTaGGCGCTCTGCAGAAACGGA +
Preference number: 4 (lower is better)
Translates to: LHSKEQVFLELQLTPINEWPKRN*ALCRNG
Trigger: TCCGTTTCTGCAGAGCGCCCAGTTCCTCTTCGGCCA...TTCATTTATTGGAGTGAGCTGCAGCTCTAAGAAGACCTGTTCTTTTGAATGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294309.8
CDS-3UTR CCA 90 bp GGAGAAAACAAAGGGTCAAGCACTGCTTTTTCTGCATTGCATTCACTGTGGGCTAGTCATCGAAGTTGTTaGCCCAGTACTCCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: GENKGSSTAFSALHSLWASHRSC*PSTPAA
Trigger: AGCAGCTGGAGTACTGGGCCAACAACTTCGATGACT...AGCCCACAGTGAATGCAATGCAGAAAAAGCAGTGCTTGACCCTTTGTTTTCTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000635811.1
ENST00000637342.1
CDS-3UTR CCA 90 bp CCATCCTGTGACACTCCTAGACGAAACGCAGACCCAGAACCTACCACAAGGAAAAGGGCCTTACAGCTATaGAAAGAGAGAAAAACTGGA +
Preference number: 4 (lower is better)
Translates to: PSCDTPRRNADPEPTTRKRALQL*KERKTG
Trigger: TCCAGTTTTTCTCTCTTTCCATAGCTGTAAGGCCCT...TTTCCTTGTGGTAGGTTCTGGGTCTGCGTTTCGTCTAGGAGTGTCACAGGATGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000294309.8
CDS-3UTR CCA 90 bp CTTTCACGGTCCATTGGGTTTTGTTATAATTTACAATTTCCACTAGATGGATGGAGGGTGCCTTCCCACTaGCCGCCCTGCACAAACAGC +
Preference number: 4 (lower is better)
Translates to: LSRSIGFCYNLQFPLDGWRVPSH*PPCTNS
Trigger: GCTGTTTGTGCAGGGCGGCCAGTGGGAAGGCACCCT...CCATCCATCTAGTGGAAATTGTAAATTATAACAAAACCCAATGGACCGTGAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635811.1
CDS-3UTR CCA 90 bp CTGACATGTGGGGATCATTACAATTCAAGGCAAGATTTGGGTGGGGACACAGCCTGCCACAAACATTTATaGGACCACCTACTGAGTACC +
Preference number: 4 (lower is better)
Translates to: LTCGDHYNSRQDLGGDTACHKHL*DHLLST
Trigger: GGTACTCAGTAGGTGGTCCCATAAATGTTTGTGGCA...GGCTGTGTCCCCACCCAAATCTTGCCTTGAATTGTAATGATCCCCACATGTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000635811.1
ENST00000637342.1
ENST00000637504.1
CDS-3UTR TCA 90 bp ACAGGAAATAAGGTCACCCATTGGCTTATACATGCCTTTGAGCAAAACAGAAAACGCCGTGCTGGTGAGTaGGGATGGGGTCTCGATAAA +
Preference number: 4 (lower is better)
Translates to: TGNKVTHWLIHAFEQNRKRRAGE*GWGLDK
Trigger: TTTATCGAGACCCCATCCTCACTCACCAGCACGGCG...TTTTCTGTTTTGCTCAAAGGCATGTATAAGCCAATGGGTGACCTTATTTCCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000294309.8
CDS-3UTR TCA 90 bp CTTGACCCTGGCTTTCACGGTCCATTGGGTTTTGTTATAATTTACAATTTCCACGCATTCCGAACATGGTaGAGAGGCACAGGTGGATGG +
Preference number: 4 (lower is better)
Translates to: LDPGFHGPLGFVIIYNFHAFRTW*RGTGGW
Trigger: CCATCCACCTGTGCCTCTTCACCATGTTCGGAATGC...GTGGAAATTGTAAATTATAACAAAACCCAATGGACCGTGAAAGCCAGGGTCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000635811.1
ENST00000637342.1
ENST00000637504.1
CDS-3UTR TCA 90 bp TGGTTCCAAGTTCATTCACTTGTGCCACAAACATTTATGGGACCACCTACTGAGGGAACTGACTGTAGATaGTGGCTGTCAGCAGGTTCA +
Preference number: 4 (lower is better)
Translates to: WFQVHSLVPQTFMGPPTEGTDCR*WLSAGS
Trigger: TGAACCTGCTGACAGCCATCATCTACAGTCAGTTCC...CTCAGTAGGTGGTCCCATAAATGTTTGTGGCACAAGTGAATGAACTTGGAACCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000635811.1
ENST00000637342.1
ENST00000637504.1
CDS-3UTR TCA 90 bp TGGTTCCAAGTTCATTCACTTGTGCCACAAACATTTATGGGACCACCTACTGAGTCGTTGAAGAGCTTCTaGAACTCCTCAGCTGAGAGC +
Preference number: 4 (lower is better)
Translates to: WFQVHSLVPQTFMGPPTESLKSF*NSSAES
Trigger: GCTCTCAGCTGAGGAGTTTCAGAAGCTCTTCAACGA...CTCAGTAGGTGGTCCCATAAATGTTTGTGGCACAAGTGAATGAACTTGGAACCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000635811.1
ENST00000637342.1
ENST00000637504.1
CDS-3UTR TCA 90 bp TTAAGGAGAATGAGAACCATTCCCAGAAAGGGCCTTACAGCTATGGAAAGAGAGGTACACAGCCAGAGTTaGGATCTCCAAAACCAGCAG +
Preference number: 4 (lower is better)
Translates to: LRRMRTIPRKGLTAMEREVHSQS*DLQNQQ
Trigger: CTGCTGGTTTTGGAGATCTCAACTCTGGCTGTGTAC...CTCTCTTTCCATAGCTGTAAGGCCCTTTCTGGGAATGGTTCTCATTCTCCTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294309.8
CDS-3UTR CCA 90 bp CAATTTCCACTAGATGGATGGTTCCAAGTTCATTCACTTGTGCCACAAACATTTACCTGCAGCAAGTTCTaGGGCTTCACCCCAACTGCC +
Preference number: 4 (lower is better)
Translates to: QFPLDGWFQVHSLVPQTFTCSKF*GFTPTA
Trigger: GGCAGTTGGGGTGAAGCCCCAGAACTTGCTGCAGGT...AAATGTTTGTGGCACAAGTGAATGAACTTGGAACCATCCATCTAGTGGAAATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000635811.1
ENST00000637342.1
ENST00000637504.1
CDS-3UTR CCA 90 bp AGCCTTGACCCTGGCTTTCACGGTCCATTGGGTTTTGTTATAATTTACAATTTCCCAGGAACACGCAAATaGACACCAGGTTTGCCAGGG +
Preference number: 4 (lower is better)
Translates to: SLDPGFHGPLGFVIIYNFPGTRK*TPGLPG
Trigger: CCCTGGCAAACCTGGTGTCCATTTGCGTGTTCCTGG...GAAATTGTAAATTATAACAAAACCCAATGGACCGTGAAAGCCAGGGTCAAGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000635811.1
ENST00000637342.1
ENST00000637504.1
CDS-3UTR CCA 90 bp AATCATATCAGGGATCCTAACCCCGGAGAAAACAAAGGGTCAAGCACTGCTTTTTCTGAAAGGTCCCTGTaGAGTCGACGAGGGAATTCT +
Preference number: 4 (lower is better)
Translates to: NHIRDPNPGENKGSSTAFSERSL*SRRGNS
Trigger: AGAATTCCCTCGTCGACTCCACAGGGACCTTTCAGA...AAAAGCAGTGCTTGACCCTTTGTTTTCTCCGGGGTTAGGATCCCTGATATGATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000635811.1
CDS-3UTR CCA 90 bp TTAAGGAGAATGAGAACCATTCCCAGAAAGGGCCTTACAGCTATGGAAAGAGAGAACCATTGGTCAATCTaGACCTGGCGTGCTTCAGGT +
Preference number: 4 (lower is better)
Translates to: LRRMRTIPRKGLTAMERENHWSI*TWRASG
Trigger: ACCTGAAGCACGCCAGGTCCAGATTGACCAATGGTT...CTCTCTTTCCATAGCTGTAAGGCCCTTTCTGGGAATGGTTCTCATTCTCCTTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294309.8
CDS-3UTR CCA 90 bp CCACTAGATGGATGGTTCCAAGTTCATTCACTTGTGCCACAAACATTTATGGGAAAGACACATCTTCCATaGGGGCAGGCAAGAGAGAGC +
Preference number: 4 (lower is better)
Translates to: PLDGWFQVHSLVPQTFMGKTHLP*GQARES
Trigger: GCTCTCTCTTGCCTGCCCCCATGGAAGATGTGTCTT...TCCCATAAATGTTTGTGGCACAAGTGAATGAACTTGGAACCATCCATCTAGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000635811.1
ENST00000637342.1
ENST00000637504.1
3UTR CAA 72 bp TTCAACACGAGTAAAAAGAAACTCATGACCTTCTCCTaGGACTCGCTCCTCTCCCCAATCTCGATACCGACT +
Preference number: 4 (lower is better)
Translates to: FNTSKKKLMTFS*DSLLSPISIPT
Trigger: AGTCGGTATCGAGATTGGGGAGAGGAGCGAGTCCAAGGAGAAGGTCATGAGTTTCTTTTTACTCGTGTTGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000294309.8
CDS-3UTR TCA 90 bp TTTACAATTTCCACTAGATGGATGGTTCCAAGTTCATTCACTTGTGCCACAAACCCAGGGCAAAGACCTTaGGCAGCATCTCCAACAGGT +
Preference number: 4 (lower is better)
Translates to: FTISTRWMVPSSFTCATNPGQRP*AASPTG
Trigger: ACCTGTTGGAGATGCTGCTCAAGGTCTTTGCCCTGG...GTTTGTGGCACAAGTGAATGAACTTGGAACCATCCATCTAGTGGAAATTGTAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000635811.1
ENST00000637342.1
ENST00000637504.1
CDS-3UTR TCA 90 bp AATTTACAATTTCCACTAGATGGATGGTTCCAAGTTCATTCACTTGTGCCACAAGGAAGCGGAACACGATaGGCATGTTCAGCATGCGGG +
Preference number: 4 (lower is better)
Translates to: NLQFPLDGWFQVHSLVPQGSGTR*ACSACG
Trigger: CCCGCATGCTGAACATGCTCATCGTGTTCCGCTTCC...TTGTGGCACAAGTGAATGAACTTGGAACCATCCATCTAGTGGAAATTGTAAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000635811.1
ENST00000637342.1
ENST00000637504.1
CDS-3UTR CCA 90 bp TTTACAATTTCCACTAGATGGATGGTTCCAAGTTCATTCACTTGTGCCACAAACATCATGGCCTGTTTGTaGGAGCTGTCCAGCTGGACC +
Preference number: 4 (lower is better)
Translates to: FTISTRWMVPSSFTCATNIMACL*ELSSWT
Trigger: GGTCCAGCTGGACAGCTCCCACAAACAGGCCATGAT...GTTTGTGGCACAAGTGAATGAACTTGGAACCATCCATCTAGTGGAAATTGTAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000635811.1
ENST00000637342.1
ENST00000637504.1
CDS-3UTR CCA 90 bp CAAACATTTATGGGACCACCTACTGAGTACCGGGTGCTGTGGACGGGGATGTATTTTCCACTAGATGGATaGTTCCAAGTTCATTCACTT +
Preference number: 4 (lower is better)
Translates to: QTFMGPPTEYRVLWTGMYFPLDG*FQVHSL
Trigger: AAGTGAATGAACTTGGAACCATCCATCTAGTGGAAA...ATACATCCCCGTCCACAGCACCCGGTACTCAGTAGGTGGTCCCATAAATGTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000635811.1
ENST00000637342.1
ENST00000637504.1
CDS-3UTR CCA 90 bp CAAACATTTATGGGACCACCTACTGAGTACCGGGTGCTGTGGACGGGGATGTATACAATTTCCACTAGATaGATGGTTCCAAGTTCATTC +
Preference number: 4 (lower is better)
Translates to: QTFMGPPTEYRVLWTGMYTISTR*MVPSSF
Trigger: GAATGAACTTGGAACCATCCATCTAGTGGAAATTGT...ATACATCCCCGTCCACAGCACCCGGTACTCAGTAGGTGGTCCCATAAATGTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000635811.1
ENST00000637342.1
ENST00000637504.1
CDS-3UTR CCA 90 bp AATCATATCAGGGATCCTAACCCCGGAGAAAACAAAGGGTCAAGCACTGCTTTTATTCAAGGCAAGATTTaGGTGGGGACACAGCCCAAT +
Preference number: 4 (lower is better)
Translates to: NHIRDPNPGENKGSSTAFIQGKI*VGTQPN
Trigger: ATTGGGCTGTGTCCCCACCCAAATCTTGCCTTGAAT...AAAAGCAGTGCTTGACCCTTTGTTTTCTCCGGGGTTAGGATCCCTGATATGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000635811.1
ENST00000637342.1
ENST00000637504.1
CDS-3UTR TCA 90 bp CTTGACCCTGGCTTTCACGGTCCATTGGGTTTTGTTATAATTTACAATTTCCACGGATCAAGAAGATGGTaGAGCTCAAAGTCCGTTGGC +
Preference number: 4 (lower is better)
Translates to: LDPGFHGPLGFVIIYNFHGSRRW*SSKSVG
Trigger: GCCAACGGACTTTGAGCTTCACCATCTTCTTGATCC...GTGGAAATTGTAAATTATAACAAAACCCAATGGACCGTGAAAGCCAGGGTCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000635811.1
ENST00000637342.1
ENST00000637504.1
CDS-3UTR TCA 90 bp CTTTCACGGTCCATTGGGTTTTGTTATAATTTACAATTTCCACTAGATGGATGGGCATTCCGAACATGGTaGAGAGGCACAGGTGGATGG +
Preference number: 4 (lower is better)
Translates to: LSRSIGFCYNLQFPLDGWAFRTW*RGTGGW
Trigger: CCATCCACCTGTGCCTCTTCACCATGTTCGGAATGC...CCATCCATCTAGTGGAAATTGTAAATTATAACAAAACCCAATGGACCGTGAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000635811.1
ENST00000637342.1
ENST00000637504.1
CDS-3UTR TCA 90 bp GGTTCCAAGTTCATTCACTTGTGCCACAAACATTTATGGGACCACCTACTGAGTTTCTGTCAAGCTCGTTaGAGAGCTTCTGAAACTCCT +
Preference number: 4 (lower is better)
Translates to: GSKFIHLCHKHLWDHLLSFCQAR*RASETP
Trigger: AGGAGTTTCAGAAGCTCTTCAACGAGCTTGACAGAA...ACTCAGTAGGTGGTCCCATAAATGTTTGTGGCACAAGTGAATGAACTTGGAACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000635811.1
ENST00000637342.1
ENST00000637504.1
CDS-3UTR TCA 90 bp CATTCCCAGAAAGGGCCTTACAGCTATGGAAAGAGAGAAAAACTGGAACGTACCGCTTATACATGCCTTTaGGCAAAACAGAAAAGGTGC +
Preference number: 4 (lower is better)
Translates to: HSQKGPYSYGKREKLERTAYTCL*AKQKRC
Trigger: GCACCTTTTCTGTTTTGCTCAAAGGCATGTATAAGC...GGTACGTTCCAGTTTTTCTCTCTTTCCATAGCTGTAAGGCCCTTTCTGGGAATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000294309.8
CDS-3UTR CCA 90 bp TTTACAATTTCCACTAGATGGATGGTTCCAAGTTCATTCACTTGTGCCACAAACAAGACACATCTTCCATaGGGGCAGGCAAGAGAGAGC +
Preference number: 4 (lower is better)
Translates to: FTISTRWMVPSSFTCATNKTHLP*GQARES
Trigger: GCTCTCTCTTGCCTGCCCCCATGGAAGATGTGTCTT...GTTTGTGGCACAAGTGAATGAACTTGGAACCATCCATCTAGTGGAAATTGTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000635811.1
ENST00000637342.1
ENST00000637504.1
CDS-3UTR CCA 90 bp TTTACAATTTCCACTAGATGGATGGTTCCAAGTTCATTCACTTGTGCCACAAACAGTCATCGAAGTTGTTaGCCCAGTACTCCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: FTISTRWMVPSSFTCATNSHRSC*PSTPAA
Trigger: AGCAGCTGGAGTACTGGGCCAACAACTTCGATGACT...GTTTGTGGCACAAGTGAATGAACTTGGAACCATCCATCTAGTGGAAATTGTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635811.1
ENST00000637342.1
CDS-3UTR CCA 90 bp CCACTAGATGGATGGTTCCAAGTTCATTCACTTGTGCCACAAACATTTATGGGATGCCACAAACATTTATaGGACCACCTACTGAGTACC +
Preference number: 4 (lower is better)
Translates to: PLDGWFQVHSLVPQTFMGCHKHL*DHLLST
Trigger: GGTACTCAGTAGGTGGTCCCATAAATGTTTGTGGCA...TCCCATAAATGTTTGTGGCACAAGTGAATGAACTTGGAACCATCCATCTAGTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000635811.1
ENST00000637342.1
ENST00000637504.1
CDS-3UTR TCA 90 bp ACAGGAAATAAGGTCACCCATTGGCTTATACATGCCTTTGAGCAAAACAGAAAAGCTCACTCCAATAAATaGAAGAGAAAGGGGCAGGCA +
Preference number: 4 (lower is better)
Translates to: TGNKVTHWLIHAFEQNRKAHSNK*KRKGQA
Trigger: TGCCTGCCCCTTTCTCTTTCATTTATTGGAGTGAGC...TTTTCTGTTTTGCTCAAAGGCATGTATAAGCCAATGGGTGACCTTATTTCCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000294309.8
CDS-3UTR CCA 90 bp TTTACAATTTCCACTAGATGGATGGTTCCAAGTTCATTCACTTGTGCCACAAACCATAGGCCCGGTTCTTaGAATACGCAGGAATCATCA +
Preference number: 4 (lower is better)
Translates to: FTISTRWMVPSSFTCATNHRPGS*NTQESS
Trigger: TGATGATTCCTGCGTATTCCAAGAACCGGGCCTATG...GTTTGTGGCACAAGTGAATGAACTTGGAACCATCCATCTAGTGGAAATTGTAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000635811.1
ENST00000637342.1
ENST00000637504.1
CDS-3UTR CCA 90 bp CAATTTCCACTAGATGGATGGTTCCAAGTTCATTCACTTGTGCCACAAACATTTATACAAAATAGATCTTaGACCACGGGCCTGAGTAGC +
Preference number: 4 (lower is better)
Translates to: QFPLDGWFQVHSLVPQTFIQNRS*TTGLSS
Trigger: GCTACTCAGGCCCGTGGTCCAAGATCTATTTTGTAT...AAATGTTTGTGGCACAAGTGAATGAACTTGGAACCATCCATCTAGTGGAAATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635811.1
CDS-3UTR CCA 90 bp CTTTCACGGTCCATTGGGTTTTGTTATAATTTACAATTTCCACTAGATGGATGGAAGGCAAGATTTGGGTaGGGACACAGCCCAATCATA +
Preference number: 4 (lower is better)
Translates to: LSRSIGFCYNLQFPLDGWKARFG*GHSPII
Trigger: TATGATTGGGCTGTGTCCCCACCCAAATCTTGCCTT...CCATCCATCTAGTGGAAATTGTAAATTATAACAAAACCCAATGGACCGTGAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000635811.1
ENST00000637342.1
ENST00000637504.1
CDS-3UTR GCA 90 bp CAATTTCCACTAGATGGATGGTTCCAAGTTCATTCACTTGTGCCACAAACATTTCAAAGGGTCAAGCACTaGTTTTTCTGCATTGCATTC +
Preference number: 4 (lower is better)
Translates to: QFPLDGWFQVHSLVPQTFQRVKH*FFCIAF
Trigger: GAATGCAATGCAGAAAAAGCAGTGCTTGACCCTTTG...AAATGTTTGTGGCACAAGTGAATGAACTTGGAACCATCCATCTAGTGGAAATTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000635811.1
ENST00000637342.1
ENST00000637504.1
CDS-3UTR CCA 90 bp AATCATATCAGGGATCCTAACCCCGGAGAAAACAAAGGGTCAAGCACTGCTTTTATCTCTTCTTTACGTTaGGAACATTCTGATTCTTCT +
Preference number: 4 (lower is better)
Translates to: NHIRDPNPGENKGSSTAFISSLR*EHSDSS
Trigger: AGAAGAATCAGAATGTTCCCAACGTAAAGAAGAGAT...AAAAGCAGTGCTTGACCCTTTGTTTTCTCCGGGGTTAGGATCCCTGATATGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000635811.1
CDS-3UTR CCA 90 bp CTTTCACGGTCCATTGGGTTTTGTTATAATTTACAATTTCCACTAGATGGATGGTGCCACAAACATTTATaGGACCACCTACTGAGTACC +
Preference number: 4 (lower is better)
Translates to: LSRSIGFCYNLQFPLDGWCHKHL*DHLLST
Trigger: GGTACTCAGTAGGTGGTCCCATAAATGTTTGTGGCA...CCATCCATCTAGTGGAAATTGTAAATTATAACAAAACCCAATGGACCGTGAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000635811.1
ENST00000637342.1
ENST00000637504.1
CDS-3UTR CCA 90 bp CTTGACCCTGGCTTTCACGGTCCATTGGGTTTTGTTATAATTTACAATTTCCACACAATTTCCACTAGATaGATGGTTCCAAGTTCATTC +
Preference number: 4 (lower is better)
Translates to: LDPGFHGPLGFVIIYNFHTISTR*MVPSSF
Trigger: GAATGAACTTGGAACCATCCATCTAGTGGAAATTGT...GTGGAAATTGTAAATTATAACAAAACCCAATGGACCGTGAAAGCCAGGGTCAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000635811.1
ENST00000637342.1
ENST00000637504.1
CDS-3UTR CCA 90 bp TTTACAATTTCCACTAGATGGATGGTTCCAAGTTCATTCACTTGTGCCACAAACACAATTTCCACTAGATaGATGGTTCCAAGTTCATTC +
Preference number: 4 (lower is better)
Translates to: FTISTRWMVPSSFTCATNTISTR*MVPSSF
Trigger: GAATGAACTTGGAACCATCCATCTAGTGGAAATTGT...GTTTGTGGCACAAGTGAATGAACTTGGAACCATCCATCTAGTGGAAATTGTAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000635811.1
ENST00000637342.1
ENST00000637504.1
CDS CCA 90 bp GGCTCCGACTCCGCCTGGGGTTCCGCCATCCAGCAGCCCACGCGCTaGACCCGACCCTCAGAAGCTCAAGCCCCGAAGGCGCCCAGCTTC +
Preference number: 5 (lower is better)
Translates to: GSDSAWGSAIQQPTR*TRPSEAQAPKAPSF
Trigger: GAAGCTGGGCGCCTTCGGGGCTTGAGCTTCTGAGGGTCGGGTCCAGCGCGTGGGCTGCTGGATGGCGGAACCCCAGGCGGAGTCGGAGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000294309.8
ENST00000535009.5
ENST00000635811.1
ENST00000637504.1
CDS GCA 90 bp TGGCAGGGGCCAGGCACCAGGATCCCGCCAAACGCACGCATGTTCTaGACCAGGCCCAGGACGGTACTGGCCACCACGGCCATCAGCTTC +
Preference number: 5 (lower is better)
Translates to: WQGPGTRIPPNARMF*TRPRTVLATTAISF
Trigger: GAAGCTGATGGCCGTGGTGGCCAGTACCGTCCTGGGCCTGGTGCAGAACATGCGTGCGTTTGGCGGGATCCTGGTGCCTGGCCCCTGCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442692.2
CDS GCA 90 bp CCCAGGTGGCGCTCACCCACCCGCCCAGTAGAGGCCGGCCTCGGATaGGCCTACTTTACCAGCAGGACAACGGTGAGGAGCCCGTCAAAC +
Preference number: 5 (lower is better)
Translates to: PRWRSPTRPVEAGLG*AYFTSRTTVRSPSN
Trigger: GTTTGACGGGCTCCTCACCGTTGTCCTGCTGGTAAAGTAGGCGCATCCGAGGCCGGCCTCTACTGGGCGGGTGGGTGAGCGCCACCTGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535009.5
CDS CCA 90 bp AAGCCCACCTTCCTACAGCCTCTAGTCCTCAGGGGAGGCCTGAGATaGGCCAGCACAGAGCCCAGGTGGCGCTCACCCACCCGCCCAGTA +
Preference number: 5 (lower is better)
Translates to: KPTFLQPLVLRGGLR*ASTEPRWRSPTRPV
Trigger: TACTGGGCGGGTGGGTGAGCGCCACCTGGGCTCTGTGCTGGCCCATCTCAGGCCTCCCCTGAGGACTAGAGGCTGTAGGAAGGTGGGCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535009.5
CDS-3UTR CAA 90 bp AAGGTCTCTTCCTGCCTGGCTGGCCACAGCATGGCCGCCTCTTCCATGACGGGCGGCACCAGGGCCGACTaGGATGCTGCGGTAAGTGGT +
Preference number: 5 (lower is better)
Translates to: KVSSCLAGHSMAASSMTGGTRAD*DAAVSG
Trigger: ACCACTTACCGCAGCATCCAAGTCGGCCCTGGTGCC...GCCCGTCATGGAAGAGGCGGCCATGCTGTGGCCAGCCAGGCAGGAAGAGACCTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294309.8
ENST00000542467.1
ENST00000635811.1
CDS-3UTR CAA 90 bp CCACAGCATGGCCGCCTCTTCCATGACGGGCACCTGTGTAGGCCAGCCTCTCTCGTGGTGTCCCCGGAGTaGTTTCTGGGAGTTGCTGGG +
Preference number: 5 (lower is better)
Translates to: PQHGRLFHDGHLCRPASLVVSPE*FLGVAG
Trigger: CCCAGCAACTCCCAGAAACAACTCCGGGGACACCAC...GAGAGAGGCTGGCCTACACAGGTGCCCGTCATGGAAGAGGCGGCCATGCTGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294309.8
CDS TCA 90 bp TGCCCACTGAGCAACTCGGCCAGCAGGGAAGCCAGCCCTCACCACTaGGAGCAGAAGCCCACCTTCCTACAGCCTCTAGTCCTCAGGGGA +
Preference number: 5 (lower is better)
Translates to: CPLSNSASREASPHH*EQKPTFLQPLVLRG
Trigger: TCCCCTGAGGACTAGAGGCTGTAGGAAGGTGGGCTTCTGCTCTCAGTGGTGAGGGCTGGCTTCCCTGCTGGCCGAGTTGCTCAGTGGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535009.5
CDS GCA 90 bp CACTCGGATGCAGTAGAAACCCAGCCTCCTAAAGACCTCACCGGCTaGCCACTGAGCAACTCGGCCAGCAGGGAAGCCAGCCCTCACCAC +
Preference number: 5 (lower is better)
Translates to: HSDAVETQPPKDLTG*PLSNSASREASPHH
Trigger: GTGGTGAGGGCTGGCTTCCCTGCTGGCCGAGTTGCTCAGTGGGCAGCCGGTGAGGTCTTTAGGAGGCTGGGTTTCTACTGCATCCGAGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535009.5
CDS-3UTR CAA 90 bp CTAAGAGCTCCCGGGTGCAGCAATCTGCAACAGCCAGGAGCACGCCTCGCACCCCCCAGGGCAAAGACCTaGAGCAGCATCTCCAACAGG +
Preference number: 5 (lower is better)
Translates to: LRAPGCSNLQQPGARLAPPRAKT*SSISNR
Trigger: CCTGTTGGAGATGCTGCTCAAGGTCTTTGCCCTGGG...GGGTGCGAGGCGTGCTCCTGGCTGTTGCAGATTGCTGCACCCGGGAGCTCTTAG
62% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000294309.8
CDS-3UTR CAA 90 bp AGGCAAAGGAGAAGCAAGACACATCTTCCATGGGGGCAGGCAAGAGAGAGCATGCAGGGCGCCGAGCCATaGGCAGGGGCCAGGCTGCTG +
Preference number: 5 (lower is better)
Translates to: RQRRSKTHLPWGQARESMQGAEP*AGARLL
Trigger: CAGCAGCCTGGCCCCTGCCAATGGCTCGGCGCCCTG...CATGCTCTCTCTTGCCTGCCCCCATGGAAGATGTGTCTTGCTTCTCCTTTGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000635811.1
ENST00000637342.1
CDS-3UTR CAA 90 bp CAAACAGCCCCACTCTGGCTGCCACCCGCCCGGCTCCAGACTCCTGAATGCCCCGCAAAGTCATCGAAGTaGTTGGCCCAGTACTCCAGC +
Preference number: 5 (lower is better)
Translates to: QTAPLWLPPARLQTPECPAKSSK*LAQYSS
Trigger: GCTGGAGTACTGGGCCAACAACTTCGATGACTTTGC...GGGGCATTCAGGAGTCTGGAGCCGGGCGGGTGGCAGCCAGAGTGGGGCTGTTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635811.1
CDS-3UTR CAA 90 bp GTCTCTTCCTGCCTGGCTGGCCACAGCATGGCCGCCTCTTCCATGACGGGCACCCCACACGCAAAGGACTaGGTTCCTGTCCCCAGCTTA +
Preference number: 5 (lower is better)
Translates to: VSSCLAGHSMAASSMTGTPHAKD*VPVPSL
Trigger: TAAGCTGGGGACAGGAACCAAGTCCTTTGCGTGTGG...GGTGCCCGTCATGGAAGAGGCGGCCATGCTGTGGCCAGCCAGGCAGGAAGAGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000294309.8
ENST00000542467.1
ENST00000635811.1
CDS-3UTR CAA 90 bp CCATCCCTTCCTGGTCCCGCTGAGCTCGGGCACAGACCGGGCACCAGGCTCGGTTTCTGTAGATGGTTGTaGGGCCACACGCAAAGGACT +
Preference number: 5 (lower is better)
Translates to: PSLPGPAELGHRPGTRLGFCRWL*GHTQRT
Trigger: AGTCCTTTGCGTGTGGCCCAACAACCATCTACAGAA...ACCGAGCCTGGTGCCCGGTCTGTGCCCGAGCTCAGCGGGACCAGGAAGGGATGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294309.8
CDS-3UTR CAA 90 bp AAAGGTCTCTTCCTGCCTGGCTGGCCACAGCATGGCCGCCTCTTCCATGACGGGATCATCACATCGGGGTaGTTGGCCGTGGTCAGCAGC +
Preference number: 5 (lower is better)
Translates to: KGLFLPGWPQHGRLFHDGIITSG*LAVVSS
Trigger: GCTGCTGACCACGGCCAACAACCCCGATGTGATGAT...CCCGTCATGGAAGAGGCGGCCATGCTGTGGCCAGCCAGGCAGGAAGAGACCTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294309.8
ENST00000542467.1
ENST00000635811.1
CDS-3UTR CAA 90 bp GAAAGCGGAGGGCACGGCGCCTCCCTGAAGCACCAGCAGCTGTTCTGTAGATGGTCCATCATGGCCTGTTaGTGGGAGCTGTCCAGCTGG +
Preference number: 5 (lower is better)
Translates to: ESGGHGASLKHQQLFCRWSIMAC*WELSSW
Trigger: CCAGCTGGACAGCTCCCACAAACAGGCCATGATGGA...CCATCTACAGAACAGCTGCTGGTGCTTCAGGGAGGCGCCGTGCCCTCCGCTTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294309.8
ENST00000542467.1
ENST00000635811.1
CDS-3UTR CAA 90 bp TGTGACACTCCTAGACGAAACGCAGACCCAGAACCTACCACAAGGAAACGTCACCAGGGCGCCGAGCCATaGGCAGGGGCCAGGCTGCTG +
Preference number: 5 (lower is better)
Translates to: CDTPRRNADPEPTTRKRHQGAEP*AGARLL
Trigger: CAGCAGCCTGGCCCCTGCCAATGGCTCGGCGCCCTG...GTGACGTTTCCTTGTGGTAGGTTCTGGGTCTGCGTTTCGTCTAGGAGTGTCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294309.8
CDS-3UTR CAA 90 bp TCCTGCCTGGCTGGCCACAGCATGGCCGCCTCTTCCATGACGGGCACCTGTGTAAGGGCCAGAAACAGGTaGACCCAGATGACAGACGAC +
Preference number: 5 (lower is better)
Translates to: SCLAGHSMAASSMTGTCVRARNR*TQMTDD
Trigger: GTCGTCTGTCATCTGGGTCAACCTGTTTCTGGCCCT...TACACAGGTGCCCGTCATGGAAGAGGCGGCCATGCTGTGGCCAGCCAGGCAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294309.8
ENST00000635811.1
CDS-3UTR CAA 90 bp TGGCCACAGCATGGCCGCCTCTTCCATGACGGGCACCTGTGTAGGCCAGCCTCTCCACACGCAAAGGACTaGGTTCCTGTCCCCAGCTTA +
Preference number: 5 (lower is better)
Translates to: WPQHGRLFHDGHLCRPASPHAKD*VPVPSL
Trigger: TAAGCTGGGGACAGGAACCAAGTCCTTTGCGTGTGG...AGAGGCTGGCCTACACAGGTGCCCGTCATGGAAGAGGCGGCCATGCTGTGGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294309.8
ENST00000542467.1
ENST00000635811.1
CDS-3UTR CAA 90 bp CCTGGCTGGCCACAGCATGGCCGCCTCTTCCATGACGGGCACCTGTGTAGGCCATTAATTGACTCACAGTaGCACATGGCCAGGGAGGCC +
Preference number: 5 (lower is better)
Translates to: PGWPQHGRLFHDGHLCRPLIDSQ*HMAREA
Trigger: GGCCTCCCTGGCCATGTGCAACTGTGAGTCAATTAA...TGGCCTACACAGGTGCCCGTCATGGAAGAGGCGGCCATGCTGTGGCCAGCCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635811.1
CDS-3UTR CAA 90 bp ACTGAAGCAGCTATAAAAGAAAGCGGAGGGCACGGCGCCTCCCTGAAGCACCAGGGCACCAGGGCCGACTaGGATGCTGCGGTAAGTGGT +
Preference number: 5 (lower is better)
Translates to: TEAAIKESGGHGASLKHQGTRAD*DAAVSG
Trigger: ACCACTTACCGCAGCATCCAAGTCGGCCCTGGTGCC...CTGGTGCTTCAGGGAGGCGCCGTGCCCTCCGCTTTCTTTTATAGCTGCTTCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294309.8
ENST00000542467.1
ENST00000635811.1
CDS-3UTR CAA 90 bp CTGACATGTGGGGATCATTACAATTCAAGGCAAGATTTGGGTGGGGACACAGCCCAGGGCGCCGAGCCATaGGCAGGGGCCAGGCTGCTG +
Preference number: 5 (lower is better)
Translates to: LTCGDHYNSRQDLGGDTAQGAEP*AGARLL
Trigger: CAGCAGCCTGGCCCCTGCCAATGGCTCGGCGCCCTG...GGCTGTGTCCCCACCCAAATCTTGCCTTGAATTGTAATGATCCCCACATGTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000635811.1
ENST00000637342.1
CDS-3UTR CAA 90 bp CTAAGAGCTCCCGGGTGCAGCAATCTGCAACAGCCAGGAGCACGCCTCGCACCCAAGTCATCGAAGTTGTaGGCCCAGTACTCCAGCTGC +
Preference number: 5 (lower is better)
Translates to: LRAPGCSNLQQPGARLAPKSSKL*AQYSSC
Trigger: GCAGCTGGAGTACTGGGCCAACAACTTCGATGACTT...GGGTGCGAGGCGTGCTCCTGGCTGTTGCAGATTGCTGCACCCGGGAGCTCTTAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294309.8
CDS-3UTR CAA 90 bp AGTAAGAGCCCGCCACGGACTAGACATGTTGGGCTACACGGGCCCTGCACCAGGAGGGCCAGAAACAGGTaGACCCAGATGACAGACGAC +
Preference number: 5 (lower is better)
Translates to: SKSPPRTRHVGLHGPCTRRARNR*TQMTDD
Trigger: GTCGTCTGTCATCTGGGTCAACCTGTTTCTGGCCCT...CCTGGTGCAGGGCCCGTGTAGCCCAACATGTCTAGTCCGTGGCGGGCTCTTACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635811.1
CDS-3UTR CAA 90 bp CCACAGCATGGCCGCCTCTTCCATGACGGGCACCTGTGTAGGCCAGCCTCTCTCCTGTTCTGTAGATGGTaGTTGGGCCACACGCAAAGG +
Preference number: 5 (lower is better)
Translates to: PQHGRLFHDGHLCRPASLLFCRW*LGHTQR
Trigger: CCTTTGCGTGTGGCCCAACAACCATCTACAGAACAG...GAGAGAGGCTGGCCTACACAGGTGCCCGTCATGGAAGAGGCGGCCATGCTGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294309.8
ENST00000542467.1
ENST00000635811.1
CDS-3UTR CAA 90 bp TGGCCACAGCATGGCCGCCTCTTCCATGACGGGCACCTGTGTAGGCCAGCCTCTCTGTTCTGTAGATGGTaGTTGGGCCACACGCAAAGG +
Preference number: 5 (lower is better)
Translates to: WPQHGRLFHDGHLCRPASLFCRW*LGHTQR
Trigger: CCTTTGCGTGTGGCCCAACAACCATCTACAGAACAG...AGAGGCTGGCCTACACAGGTGCCCGTCATGGAAGAGGCGGCCATGCTGTGGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294309.8
ENST00000542467.1
ENST00000635811.1
CDS-3UTR CAA 90 bp CTCTTCCTGCCTGGCTGGCCACAGCATGGCCGCCTCTTCCATGACGGGCACCTGGAAGTGAGAAAACCATaGGTCAATCTGGACCTGGCG +
Preference number: 5 (lower is better)
Translates to: LFLPGWPQHGRLFHDGHLEVRKP*VNLDLA
Trigger: CGCCAGGTCCAGATTGACCAATGGTTTTCTCACTTC...CAGGTGCCCGTCATGGAAGAGGCGGCCATGCTGTGGCCAGCCAGGCAGGAAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294309.8
CDS-3UTR CAA 90 bp GGCGTGCTTCAGGTGACAACAAGGCTTTCCACACACTGCTCGCTCGCCCCACCTGAAAGGGGGCGTGGGTaGGCCCCTGAAGTGAGAAAA +
Preference number: 5 (lower is better)
Translates to: GVLQVTTRLSTHCSLAPPERGRG*APEVRK
Trigger: TTTTCTCACTTCAGGGGCCAACCCACGCCCCCTTTC...AGGTGGGGCGAGCGAGCAGTGTGTGGAAAGCCTTGTTGTCACCTGAAGCACGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000294309.8
CDS GCA 90 bp CAGGCCTCAGAACACGGTGCATCAAAGCAGCAAATGCGTCCAGGATaGAGAAGACAAGTCCTCCGGGGACTGACGAAGAGCCGTGCCCAG +
Preference number: 5 (lower is better)
Translates to: QASEHGASKQQMRPG*RRQVLRGLTKSRAQ
Trigger: CTGGGCACGGCTCTTCGTCAGTCCCCGGAGGACTTGTCTTCTGCATCCTGGACGCATTTGCTGCTTTGATGCACCGTGTTCTGAGGCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534832.1
CDS CCA 90 bp GTCATCCTCCAGGATGCCCCCACCCACCCGGGACCTAGAATGGGGTaGTCCACAACAGGCCTCAGAACACGGTGCATCAAAGCAGCAAAT +
Preference number: 5 (lower is better)
Translates to: VILQDAPTHPGPRMG*STTGLRTRCIKAAN
Trigger: ATTTGCTGCTTTGATGCACCGTGTTCTGAGGCCTGTTGTGGACCACCCCATTCTAGGTCCCGGGTGGGTGGGGGCATCCTGGAGGATGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534832.1
CDS-3UTR CAA 90 bp GGGGAGTGGTGTCCCCGGAGTTGTTTCTGGGAGTTGCTGGGTCCACCTTACCTTATCATCACATCGGGGTaGTTGGCCGTGGTCAGCAGC +
Preference number: 5 (lower is better)
Translates to: GEWCPRSCFWELLGPPYLIITSG*LAVVSS
Trigger: GCTGCTGACCACGGCCAACAACCCCGATGTGATGAT...AAGGTAAGGTGGACCCAGCAACTCCCAGAAACAACTCCGGGGACACCACTCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000294309.8
CDS-3UTR CAA 90 bp CATCGTGAGGAGTTGATGCTGTTCTGGGGACTCCACGTGAGAGCCTCCTGGGTCTCCATCATGGCCTGTTaGTGGGAGCTGTCCAGCTGG +
Preference number: 5 (lower is better)
Translates to: HREELMLFWGLHVRASWVSIMAC*WELSSW
Trigger: CCAGCTGGACAGCTCCCACAAACAGGCCATGATGGA...GACCCAGGAGGCTCTCACGTGGAGTCCCCAGAACAGCATCAACTCCTCACGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635811.1
ENST00000637504.1
CDS-3UTR CAA 90 bp CTGTCCTTTGACCTGAGGCCAAGAGCCTGCTCTGACCCCTTGTCACCCTTCCCACCCAGGGCAAAGACCTaGAGCAGCATCTCCAACAGG +
Preference number: 5 (lower is better)
Translates to: LSFDLRPRACSDPLSPFPPRAKT*SSISNR
Trigger: CCTGTTGGAGATGCTGCTCAAGGTCTTTGCCCTGGG...TGGGAAGGGTGACAAGGGGTCAGAGCAGGCTCTTGGCCTCAGGTCAAAGGACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000635811.1
ENST00000637342.1
ENST00000637504.1
CDS-3UTR CAA 90 bp AAAGGTCTCTTCCTGCCTGGCTGGCCACAGCATGGCCGCCTCTTCCATGACGGGAAGTCATCGAAGTTGTaGGCCCAGTACTCCAGCTGC +
Preference number: 5 (lower is better)
Translates to: KGLFLPGWPQHGRLFHDGKSSKL*AQYSSC
Trigger: GCAGCTGGAGTACTGGGCCAACAACTTCGATGACTT...CCCGTCATGGAAGAGGCGGCCATGCTGTGGCCAGCCAGGCAGGAAGAGACCTTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294309.8
ENST00000635811.1
CDS-3UTR CAA 90 bp CCCCAGCTTAGTGGTCCGTCAGAGGAAAGGTCTCTTCCTGCCTGGCTGGCCACAGAGCATCGTGAGGAGTaGATGCTGTTCTGGGGACTC +
Preference number: 5 (lower is better)
Translates to: PQLSGPSEERSLPAWLATEHREE*MLFWGL
Trigger: GAGTCCCCAGAACAGCATCAACTCCTCACGATGCTC...TGTGGCCAGCCAGGCAGGAAGAGACCTTTCCTCTGACGGACCACTAAGCTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635811.1
CDS TCA 90 bp AGCAGCAAATGCGTCCAGGATGCAGAAGACAAGTCCTCCGGGGACTaGCGAAGAGCCGTGCCCAGAGGCTCCACCCTCAGTTCTCTTAAC +
Preference number: 5 (lower is better)
Translates to: SSKCVQDAEDKSSGD*RRAVPRGSTLSSLN
Trigger: GTTAAGAGAACTGAGGGTGGAGCCTCTGGGCACGGCTCTTCGTCAGTCCCCGGAGGACTTGTCTTCTGCATCCTGGACGCATTTGCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534832.1
CDS GCA 90 bp TCCAGGATGCAGAAGACAAGTCCTCCGGGGACTGACGAAGAGCCGTaGCCAGAGGCTCCACCCTCAGTTCTCTTAACCTACAGTCCAGCA +
Preference number: 5 (lower is better)
Translates to: SRMQKTSPPGTDEEP*PEAPPSVLLTYSPA
Trigger: TGCTGGACTGTAGGTTAAGAGAACTGAGGGTGGAGCCTCTGGGCACGGCTCTTCGTCAGTCCCCGGAGGACTTGTCTTCTGCATCCTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534832.1
CDS CCA 90 bp TATGTGCCGAGGGGCCTGCTGGCTACAGCAAACGTCACTCTCATGTaGCTGCTTGTGACACACACACCAAGTGTGGCATGCCCTCACTCC +
Preference number: 5 (lower is better)
Translates to: YVPRGLLATANVTLM*LLVTHTPSVACPHS
Trigger: GGAGTGAGGGCATGCCACACTTGGTGTGTGTGTCACAAGCAGCCACATGAGAGTGACGTTTGCTGTAGCCAGCAGGCCCCTCGGCACATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535009.5
CDS CCA 90 bp CCTGGACCCCACGGGTTGGTTCCAGATGTCAGGACTTCTTTCAGCTaGAAAGACACCCTGGCCTCAGGAATCGGGGGACTGCACAGATTG +
Preference number: 5 (lower is better)
Translates to: PGPHGLVPDVRTSFS*KDTLASGIGGLHRL
Trigger: CAATCTGTGCAGTCCCCCGATTCCTGAGGCCAGGGTGTCTTTCCAGCTGAAAGAAGTCCTGACATCTGGAACCAACCCGTGGGGTCCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000535009.5
CDS-3UTR CAA 90 bp CTCTTCCTGCCTGGCTGGCCACAGCATGGCCGCCTCTTCCATGACGGGCACCTGGAAGCTCAAAGTCCGTaGGCATACGTTCGAGTAATA +
Preference number: 5 (lower is better)
Translates to: LFLPGWPQHGRLFHDGHLEAQSP*AYVRVI
Trigger: TATTACTCGAACGTATGCCAACGGACTTTGAGCTTC...CAGGTGCCCGTCATGGAAGAGGCGGCCATGCTGTGGCCAGCCAGGCAGGAAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294309.8
ENST00000542467.1
ENST00000635811.1
CDS-3UTR CAA 90 bp AAACCACCAGCATCCCCACCTGAATGCCCCGGAAGTCTGACGGTTAACCTGTGCTCCATCATGGCCTGTTaGTGGGAGCTGTCCAGCTGG +
Preference number: 5 (lower is better)
Translates to: KPPASPPECPGSLTVNLCSIMAC*WELSSW
Trigger: CCAGCTGGACAGCTCCCACAAACAGGCCATGATGGA...GCACAGGTTAACCGTCAGACTTCCGGGGCATTCAGGTGGGGATGCTGGTGGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294309.8
CDS-3UTR CAA 90 bp CCACAGCATGGCCGCCTCTTCCATGACGGGCACCTGTGTAGGCCAGCCTCTCTCACAATGAAGACGCAGTaGAGAATCCCCAGGATGAAG +
Preference number: 5 (lower is better)
Translates to: PQHGRLFHDGHLCRPASLTMKTQ*RIPRMK
Trigger: CTTCATCCTGGGGATTCTCAACTGCGTCTTCATTGT...GAGAGAGGCTGGCCTACACAGGTGCCCGTCATGGAAGAGGCGGCCATGCTGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294309.8
ENST00000542467.1
ENST00000635811.1
CDS-3UTR CAA 90 bp TGGCCACAGCATGGCCGCCTCTTCCATGACGGGCACCTGTGTAGGCCAGCCTCTACAATGAAGACGCAGTaGAGAATCCCCAGGATGAAG +
Preference number: 5 (lower is better)
Translates to: WPQHGRLFHDGHLCRPASTMKTQ*RIPRMK
Trigger: CTTCATCCTGGGGATTCTCAACTGCGTCTTCATTGT...AGAGGCTGGCCTACACAGGTGCCCGTCATGGAAGAGGCGGCCATGCTGTGGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294309.8
ENST00000542467.1
ENST00000635811.1
CDS-3UTR CAA 90 bp AAAGGTCTCTTCCTGCCTGGCTGGCCACAGCATGGCCGCCTCTTCCATGACGGGAGTTGTTTCTGGGAGTaGCTGGGTCCACCTTACCTT +
Preference number: 5 (lower is better)
Translates to: KGLFLPGWPQHGRLFHDGSCFWE*LGPPYL
Trigger: AAGGTAAGGTGGACCCAGCAACTCCCAGAAACAACT...CCCGTCATGGAAGAGGCGGCCATGCTGTGGCCAGCCAGGCAGGAAGAGACCTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294309.8
CDS-3UTR CAA 90 bp CCTCCTGGAGGCCCCTCATCCCCAGTAAGAGCCCGCCACGGACTAGACATGTTGACAATGAAGACGCAGTaGAGAATCCCCAGGATGAAG +
Preference number: 5 (lower is better)
Translates to: PPGGPSSPVRARHGLDMLTMKTQ*RIPRMK
Trigger: CTTCATCCTGGGGATTCTCAACTGCGTCTTCATTGT...CAACATGTCTAGTCCGTGGCGGGCTCTTACTGGGGATGAGGGGCCTCCAGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000635811.1
ENST00000637342.1
ENST00000637504.1
CDS-3UTR CAA 90 bp CACAGTTGCACATGGCCAGGGAGGCCTCACAATCATGGCAGAAGGCAAAGGAGACCCAGGGCAAAGACCTaGAGCAGCATCTCCAACAGG +
Preference number: 5 (lower is better)
Translates to: HSCTWPGRPHNHGRRQRRPRAKT*SSISNR
Trigger: CCTGTTGGAGATGCTGCTCAAGGTCTTTGCCCTGGG...TCTCCTTTGCCTTCTGCCATGATTGTGAGGCCTCCCTGGCCATGTGCAACTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635811.1
ENST00000637504.1
CDS-3UTR CAA 90 bp CCTGGCTGGCCACAGCATGGCCGCCTCTTCCATGACGGGCACCTGTGTAGGCCAACGCCTCTAAACAAGTaGATCCCAATGATGGCAAAT +
Preference number: 5 (lower is better)
Translates to: PGWPQHGRLFHDGHLCRPTPLNK*IPMMAN
Trigger: ATTTGCCATCATTGGGATCAACTTGTTTAGAGGCGT...TGGCCTACACAGGTGCCCGTCATGGAAGAGGCGGCCATGCTGTGGCCAGCCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294309.8
ENST00000635811.1
CDS-3UTR CAA 90 bp CCTGTCCCCAGCTTAGTGGTCCGTCAGAGGAAAGGTCTCTTCCTGCCTGGCTGGTTCTGTAGATGGTTGTaGGGCCACACGCAAAGGACT +
Preference number: 5 (lower is better)
Translates to: PVPSLVVRQRKGLFLPGWFCRWL*GHTQRT
Trigger: AGTCCTTTGCGTGTGGCCCAACAACCATCTACAGAA...CCAGCCAGGCAGGAAGAGACCTTTCCTCTGACGGACCACTAAGCTGGGGACAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294309.8
ENST00000542467.1
ENST00000635811.1
CDS-3UTR CAA 90 bp CAAACAGCCCCACTCTGGCTGCCACCCGCCCGGCTCCAGACTCCTGAATGCCCCGGCTTTCACGGTCCATaGGGTTTTGTTATAATTTAC +
Preference number: 5 (lower is better)
Translates to: QTAPLWLPPARLQTPECPGFHGP*GFVIIY
Trigger: GTAAATTATAACAAAACCCAATGGACCGTGAAAGCC...GGGGCATTCAGGAGTCTGGAGCCGGGCGGGTGGCAGCCAGAGTGGGGCTGTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000635811.1
CDS TCA 90 bp CCAGCACCAGGAACACGCAAATGGACACCAGGTTTGCCAGGGCGATaGGGTTCCCCAGGTAGTCAAAGTAGTAGTGGCCGAAGAGGAACT +
Preference number: 5 (lower is better)
Translates to: PAPGTRKWTPGLPGR*GSPGSQSSSGRRGT
Trigger: AGTTCCTCTTCGGCCACTACTACTTTGACTACCTGGGGAACCTCATCGCCCTGGCAAACCTGGTGTCCATTTGCGTGTTCCTGGTGCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000294309.8
ENST00000442692.2
ENST00000535009.5
ENST00000542467.1
ENST00000635811.1
ENST00000637342.1
ENST00000637504.1
CDS GCA 90 bp CTTCTTTCAGCTGGAAAGACACCCTGGCCTCAGGAATCGGGGGACTaGACAGATTGGGGTGGCAGAGGTGGCAGAGAAGATACTGAGTCA +
Preference number: 5 (lower is better)
Translates to: LLSAGKTPWPQESGD*TDWGGRGGREDTES
Trigger: TGACTCAGTATCTTCTCTGCCACCTCTGCCACCCCAATCTGTGCAGTCCCCCGATTCCTGAGGCCAGGGTGTCTTTCCAGCTGAAAGAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000535009.5
CDS GCA 90 bp CCGGGACCTAGAATGGGGTGGTCCACAACAGGCCTCAGAACACGGTaGATCAAAGCAGCAAATGCGTCCAGGATGCAGAAGACAAGTCCT +
Preference number: 5 (lower is better)
Translates to: PGPRMGWSTTGLRTR*IKAANASRMQKTSP
Trigger: AGGACTTGTCTTCTGCATCCTGGACGCATTTGCTGCTTTGATGCACCGTGTTCTGAGGCCTGTTGTGGACCACCCCATTCTAGGTCCCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534832.1
CDS-3UTR CAA 90 bp GGGTCAAGCACTGCTTTTTCTGCATTGCATTCACTGTGGGCTTCAGACACAGCAGGCACCAGGGCCGACTaGGATGCTGCGGTAAGTGGT +
Preference number: 5 (lower is better)
Translates to: GSSTAFSALHSLWASDTAGTRAD*DAAVSG
Trigger: ACCACTTACCGCAGCATCCAAGTCGGCCCTGGTGCC...TGCTGTGTCTGAAGCCCACAGTGAATGCAATGCAGAAAAAGCAGTGCTTGACCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000635811.1
ENST00000637342.1
ENST00000637504.1
CDS-3UTR CAA 90 bp GAAAGCGGAGGGCACGGCGCCTCCCTGAAGCACCAGCAGCTGTTCTGTAGATGGGAAGCTCAAAGTCCGTaGGCATACGTTCGAGTAATA +
Preference number: 5 (lower is better)
Translates to: ESGGHGASLKHQQLFCRWEAQSP*AYVRVI
Trigger: TATTACTCGAACGTATGCCAACGGACTTTGAGCTTC...CCATCTACAGAACAGCTGCTGGTGCTTCAGGGAGGCGCCGTGCCCTCCGCTTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294309.8
ENST00000542467.1
ENST00000635811.1
CDS-3UTR CAA 90 bp CCTGTCCCCAGCTTAGTGGTCCGTCAGAGGAAAGGTCTCTTCCTGCCTGGCTGGACAATGAAGACGCAGTaGAGAATCCCCAGGATGAAG +
Preference number: 5 (lower is better)
Translates to: PVPSLVVRQRKGLFLPGWTMKTQ*RIPRMK
Trigger: CTTCATCCTGGGGATTCTCAACTGCGTCTTCATTGT...CCAGCCAGGCAGGAAGAGACCTTTCCTCTGACGGACCACTAAGCTGGGGACAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000294309.8
ENST00000542467.1
ENST00000635811.1
CDS-3UTR CAA 90 bp AGCTGTTCTGTAGATGGTTGTTGGGCCACACGCAAAGGACTTGGTTCCTGTCCCCCCAGGGCAAAGACCTaGAGCAGCATCTCCAACAGG +
Preference number: 5 (lower is better)
Translates to: SCSVDGCWATRKGLGSCPPRAKT*SSISNR
Trigger: CCTGTTGGAGATGCTGCTCAAGGTCTTTGCCCTGGG...GGGACAGGAACCAAGTCCTTTGCGTGTGGCCCAACAACCATCTACAGAACAGCT
56% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000294309.8
ENST00000542467.1
ENST00000635811.1
CDS-3UTR CAA 90 bp GGCGTGCTTCAGGTGACAACAAGGCTTTCCACACACTGCTCGCTCGCCCCACCTAGAAACACCTGCCAGTaGTTCACCACCATCAAGTTC +
Preference number: 5 (lower is better)
Translates to: GVLQVTTRLSTHCSLAPPRNTCQ*FTTIKF
Trigger: GAACTTGATGGTGGTGAACAACTGGCAGGTGTTTCT...AGGTGGGGCGAGCGAGCAGTGTGTGGAAAGCCTTGTTGTCACCTGAAGCACGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294309.8
CDS-3UTR CAA 90 bp CAAACATTTATGGGACCACCTACTGAGTACCGGGTGCTGTGGACGGGGATGTATCACGGACTAGACATGTaGGGCTACACGGGCCCTGCA +
Preference number: 5 (lower is better)
Translates to: QTFMGPPTEYRVLWTGMYHGLDM*GYTGPA
Trigger: TGCAGGGCCCGTGTAGCCCAACATGTCTAGTCCGTG...ATACATCCCCGTCCACAGCACCCGGTACTCAGTAGGTGGTCCCATAAATGTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000635811.1
ENST00000637342.1
ENST00000637504.1
CDS-3UTR CAA 90 bp AAGGCAAAGGAGAAGCAAGACACATCTTCCATGGGGGCAGGCAAGAGAGAGCATCACGGACTAGACATGTaGGGCTACACGGGCCCTGCA +
Preference number: 5 (lower is better)
Translates to: KAKEKQDTSSMGAGKREHHGLDM*GYTGPA
Trigger: TGCAGGGCCCGTGTAGCCCAACATGTCTAGTCCGTG...ATGCTCTCTCTTGCCTGCCCCCATGGAAGATGTGTCTTGCTTCTCCTTTGCCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000635811.1
ENST00000637342.1
ENST00000637504.1
CDS GCA 90 bp CAAGGACAGACTGCAGGGCCCTTTTCAAATTTCTCTTCACCTATGTaGCGAGGGGCCTGCTGGCTACAGCAAACGTCACTCTCATGTGGC +
Preference number: 5 (lower is better)
Translates to: QGQTAGPFSNFSSPM*RGACWLQQTSLSCG
Trigger: GCCACATGAGAGTGACGTTTGCTGTAGCCAGCAGGCCCCTCGGCACATAGGTGAAGAGAAATTTGAAAAGGGCCCTGCAGTCTGTCCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535009.5
CDS-3UTR CAA 90 bp CCCCAGCTTAGTGGTCCGTCAGAGGAAAGGTCTCTTCCTGCCTGGCTGGCCACAGAAGCTCAAAGTCCGTaGGCATACGTTCGAGTAATA +
Preference number: 5 (lower is better)
Translates to: PQLSGPSEERSLPAWLATEAQSP*AYVRVI
Trigger: TATTACTCGAACGTATGCCAACGGACTTTGAGCTTC...TGTGGCCAGCCAGGCAGGAAGAGACCTTTCCTCTGACGGACCACTAAGCTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294309.8
ENST00000542467.1
ENST00000635811.1
CDS-3UTR CAA 90 bp TGTTCTGTAGATGGTTGTTGGGCCACACGCAAAGGACTTGGTTCCTGTCCCCAGCCACACGCAAAGGACTaGGTTCCTGTCCCCAGCTTA +
Preference number: 5 (lower is better)
Translates to: CSVDGCWATRKGLGSCPQPHAKD*VPVPSL
Trigger: TAAGCTGGGGACAGGAACCAAGTCCTTTGCGTGTGG...CTGGGGACAGGAACCAAGTCCTTTGCGTGTGGCCCAACAACCATCTACAGAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000294309.8
ENST00000542467.1
ENST00000635811.1
CDS-3UTR CAA 90 bp ATGAGGCAGGACCCTCAGCAGCATGTAGATTTTGCTGTTGCTGATTGTAAAGGCATACCGACTGCACTGTaGTTCGGGTCGCCCCCTCCC +
Preference number: 5 (lower is better)
Translates to: MRQDPQQHVDFAVADCKGIPTAL*FGSPPP
Trigger: GGGAGGGGGCGACCCGAACAACAGTGCAGTCGGTAT...GCCTTTACAATCAGCAACAGCAAAATCTACATGCTGCTGAGGGTCCTGCCTCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000294309.8
CDS-3UTR CAA 90 bp AGCACAAAAACTCCCTCGATGACAGGGCCTCAGCAGGCCCCAGCCTTGACCCTGACTGCTTTTTCTGCATaGCATTCACTGTGGGCTTCA +
Preference number: 5 (lower is better)
Translates to: STKTPSMTGPQQAPALTLTAFSA*HSLWAS
Trigger: TGAAGCCCACAGTGAATGCAATGCAGAAAAAGCAGT...CAGGGTCAAGGCTGGGGCCTGCTGAGGCCCTGTCATCGAGGGAGTTTTTGTGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000635811.1
ENST00000637342.1
ENST00000637504.1
CDS-3UTR CAA 90 bp CTGACATGTGGGGATCATTACAATTCAAGGCAAGATTTGGGTGGGGACACAGCCCCCAGGGCAAAGACCTaGAGCAGCATCTCCAACAGG +
Preference number: 5 (lower is better)
Translates to: LTCGDHYNSRQDLGGDTAPRAKT*SSISNR
Trigger: CCTGTTGGAGATGCTGCTCAAGGTCTTTGCCCTGGG...GGCTGTGTCCCCACCCAAATCTTGCCTTGAATTGTAATGATCCCCACATGTCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000635811.1
ENST00000637342.1
ENST00000637504.1
CDS-3UTR CAA 90 bp TGTTCTGTAGATGGTTGTTGGGCCACACGCAAAGGACTTGGTTCCTGTCCCCAGGCAAAGTCATCGAAGTaGTTGGCCCAGTACTCCAGC +
Preference number: 5 (lower is better)
Translates to: CSVDGCWATRKGLGSCPQAKSSK*LAQYSS
Trigger: GCTGGAGTACTGGGCCAACAACTTCGATGACTTTGC...CTGGGGACAGGAACCAAGTCCTTTGCGTGTGGCCCAACAACCATCTACAGAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294309.8
ENST00000635811.1
CDS-3UTR CAA 90 bp GGGGAGTGGTGTCCCCGGAGTTGTTTCTGGGAGTTGCTGGGTCCACCTTACCTTCATTTGGAAAGCTGTTaGCTGAAGGTTTTGGCAGCA +
Preference number: 5 (lower is better)
Translates to: GEWCPRSCFWELLGPPYLHLESC*LKVLAA
Trigger: TGCTGCCAAAACCTTCAGCAAACAGCTTTCCAAATG...AAGGTAAGGTGGACCCAGCAACTCCCAGAAACAACTCCGGGGACACCACTCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000294309.8
CDS-3UTR CAA 90 bp TTCAATGATCTCCACCTGGCCCCACTCCTGACATGTGGGGATCATTACAATTCACACGGACTAGACATGTaGGGCTACACGGGCCCTGCA +
Preference number: 5 (lower is better)
Translates to: FNDLHLAPLLTCGDHYNSHGLDM*GYTGPA
Trigger: TGCAGGGCCCGTGTAGCCCAACATGTCTAGTCCGTG...TGAATTGTAATGATCCCCACATGTCAGGAGTGGGGCCAGGTGGAGATCATTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000635811.1
ENST00000637342.1
ENST00000637504.1
CDS-3UTR CAA 90 bp TGGTTCCAAGTTCATTCACTTGTGCCACAAACATTTATGGGACCACCTACTGAGGGCACCAGGGCCGACTaGGATGCTGCGGTAAGTGGT +
Preference number: 5 (lower is better)
Translates to: WFQVHSLVPQTFMGPPTEGTRAD*DAAVSG
Trigger: ACCACTTACCGCAGCATCCAAGTCGGCCCTGGTGCC...CTCAGTAGGTGGTCCCATAAATGTTTGTGGCACAAGTGAATGAACTTGGAACCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000635811.1
ENST00000637342.1
ENST00000637504.1
CDS-3UTR CAA 90 bp CGGACTAGACATGTTGGGCTACACGGGCCCTGCACCAGGGCAGTCATCATCTTTGAAGCTCAAAGTCCGTaGGCATACGTTCGAGTAATA +
Preference number: 5 (lower is better)
Translates to: RTRHVGLHGPCTRAVIIFEAQSP*AYVRVI
Trigger: TATTACTCGAACGTATGCCAACGGACTTTGAGCTTC...AAAGATGATGACTGCCCTGGTGCAGGGCCCGTGTAGCCCAACATGTCTAGTCCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000635811.1
ENST00000637342.1
ENST00000637504.1
CDS-3UTR CAA 90 bp TGTTCTGTAGATGGTTGTTGGGCCACACGCAAAGGACTTGGTTCCTGTCCCCAGGGAGGCCGCTGCTTCTaGCATTTTTGTCTGAAAGGT +
Preference number: 5 (lower is better)
Translates to: CSVDGCWATRKGLGSCPQGGRCF*HFCLKG
Trigger: ACCTTTCAGACAAAAATGCAAGAAGCAGCGGCCTCC...CTGGGGACAGGAACCAAGTCCTTTGCGTGTGGCCCAACAACCATCTACAGAACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294309.8
ENST00000635811.1
CDS-3UTR CAA 90 bp GTTCCTGTCCCCAGCTTAGTGGTCCGTCAGAGGAAAGGTCTCTTCCTGCCTGGCGGCTTATACATGCCTTaGAGCAAAACAGAAAAGGTG +
Preference number: 5 (lower is better)
Translates to: VPVPSLVVRQRKGLFLPGGLYMP*SKTEKV
Trigger: CACCTTTTCTGTTTTGCTCAAAGGCATGTATAAGCC...GCCAGGCAGGAAGAGACCTTTCCTCTGACGGACCACTAAGCTGGGGACAGGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000294309.8
CDS-3UTR CAA 90 bp CTTCTTGCATTTTTGTCTGAAAGGTCCCTGTGGAGTCGACGAGGGAATTCTCACCTCATGACCTTCTCCTaGGACTCGCTCCTCTCCCCA +
Preference number: 5 (lower is better)
Translates to: LLAFLSERSLWSRRGNSHLMTFS*DSLLSP
Trigger: TGGGGAGAGGAGCGAGTCCAAGGAGAAGGTCATGAG...GTGAGAATTCCCTCGTCGACTCCACAGGGACCTTTCAGACAAAAATGCAAGAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000294309.8
CDS-3UTR CAA 90 bp GGAGAAAACAAAGGGTCAAGCACTGCTTTTTCTGCATTGCATTCACTGTGGGCTGCCTGCTCTGACCCCTaGTCACCCTTCCCAACTGTG +
Preference number: 5 (lower is better)
Translates to: GENKGSSTAFSALHSLWAACSDP*SPFPTV
Trigger: CACAGTTGGGAAGGGTGACAAGGGGTCAGAGCAGGC...AGCCCACAGTGAATGCAATGCAGAAAAAGCAGTGCTTGACCCTTTGTTTTCTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000635811.1
ENST00000637342.1
ENST00000637504.1
CDS-3UTR CAA 90 bp ACAGCAGAGTCAGGAGGACTCCTGTCCTTTGACCTGAGGCCAAGAGCCTGCTCTACTGCTTTTTCTGCATaGCATTCACTGTGGGCTTCA +
Preference number: 5 (lower is better)
Translates to: TAESGGLLSFDLRPRACSTAFSA*HSLWAS
Trigger: TGAAGCCCACAGTGAATGCAATGCAGAAAAAGCAGT...AGAGCAGGCTCTTGGCCTCAGGTCAAAGGACAGGAGTCCTCCTGACTCTGCTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000635811.1
ENST00000637342.1
ENST00000637504.1
CDS-3UTR CAA 90 bp CAGGTTGACCCAGATGACAGACGACACCAGCCACCACAATACAAAATAGATCTTATCATCACATCGGGGTaGTTGGCCGTGGTCAGCAGC +
Preference number: 5 (lower is better)
Translates to: QVDPDDRRHQPPQYKIDLIITSG*LAVVSS
Trigger: GCTGCTGACCACGGCCAACAACCCCGATGTGATGAT...AAGATCTATTTTGTATTGTGGTGGCTGGTGTCGTCTGTCATCTGGGTCAACCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635811.1
CDS-3UTR CAA 90 bp ACAGCAGAGTCAGGAGGACTCCTGTCCTTTGACCTGAGGCCAAGAGCCTGCTCTACGCCTCTAAACAAGTaGATCCCAATGATGGCAAAT +
Preference number: 5 (lower is better)
Translates to: TAESGGLLSFDLRPRACSTPLNK*IPMMAN
Trigger: ATTTGCCATCATTGGGATCAACTTGTTTAGAGGCGT...AGAGCAGGCTCTTGGCCTCAGGTCAAAGGACAGGAGTCCTCCTGACTCTGCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000635811.1
ENST00000637342.1
ENST00000637504.1
CDS-3UTR CAA 90 bp CTGGCCCCACTCCTGACATGTGGGGATCATTACAATTCAAGGCAAGATTTGGGTAAGTCATCGAAGTTGTaGGCCCAGTACTCCAGCTGC +
Preference number: 5 (lower is better)
Translates to: LAPLLTCGDHYNSRQDLGKSSKL*AQYSSC
Trigger: GCAGCTGGAGTACTGGGCCAACAACTTCGATGACTT...ACCCAAATCTTGCCTTGAATTGTAATGATCCCCACATGTCAGGAGTGGGGCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000635811.1
ENST00000637342.1
CDS-3UTR CAA 90 bp CTTGACCCTGGCTTTCACGGTCCATTGGGTTTTGTTATAATTTACAATTTCCACGGCACCAGGGCCGACTaGGATGCTGCGGTAAGTGGT +
Preference number: 5 (lower is better)
Translates to: LDPGFHGPLGFVIIYNFHGTRAD*DAAVSG
Trigger: ACCACTTACCGCAGCATCCAAGTCGGCCCTGGTGCC...GTGGAAATTGTAAATTATAACAAAACCCAATGGACCGTGAAAGCCAGGGTCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000635811.1
ENST00000637342.1
ENST00000637504.1
CDS-3UTR CAA 90 bp TGGTTCCAAGTTCATTCACTTGTGCCACAAACATTTATGGGACCACCTACTGAGATCATCACATCGGGGTaGTTGGCCGTGGTCAGCAGC +
Preference number: 5 (lower is better)
Translates to: WFQVHSLVPQTFMGPPTEIITSG*LAVVSS
Trigger: GCTGCTGACCACGGCCAACAACCCCGATGTGATGAT...CTCAGTAGGTGGTCCCATAAATGTTTGTGGCACAAGTGAATGAACTTGGAACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000635811.1
ENST00000637342.1
ENST00000637504.1
CDS-3UTR CAA 90 bp AATCATATCAGGGATCCTAACCCCGGAGAAAACAAAGGGTCAAGCACTGCTTTTTCCATCATGGCCTGTTaGTGGGAGCTGTCCAGCTGG +
Preference number: 5 (lower is better)
Translates to: NHIRDPNPGENKGSSTAFSIMAC*WELSSW
Trigger: CCAGCTGGACAGCTCCCACAAACAGGCCATGATGGA...AAAAGCAGTGCTTGACCCTTTGTTTTCTCCGGGGTTAGGATCCCTGATATGATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000635811.1
ENST00000637342.1
ENST00000637504.1
CDS-3UTR CAA 90 bp GGTTCCAAGTTCATTCACTTGTGCCACAAACATTTATGGGACCACCTACTGAGTTCCATCATGGCCTGTTaGTGGGAGCTGTCCAGCTGG +
Preference number: 5 (lower is better)
Translates to: GSKFIHLCHKHLWDHLLSSIMAC*WELSSW
Trigger: CCAGCTGGACAGCTCCCACAAACAGGCCATGATGGA...ACTCAGTAGGTGGTCCCATAAATGTTTGTGGCACAAGTGAATGAACTTGGAACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000635811.1
ENST00000637342.1
ENST00000637504.1
CDS-3UTR CAA 90 bp ATGTGGGGATCATTACAATTCAAGGCAAGATTTGGGTGGGGACACAGCCCAATCGCAAAGTCATCGAAGTaGTTGGCCCAGTACTCCAGC +
Preference number: 5 (lower is better)
Translates to: MWGSLQFKARFGWGHSPIAKSSK*LAQYSS
Trigger: GCTGGAGTACTGGGCCAACAACTTCGATGACTTTGC...GATTGGGCTGTGTCCCCACCCAAATCTTGCCTTGAATTGTAATGATCCCCACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000635811.1
ENST00000637342.1
CDS-3UTR CAA 90 bp CAAACATTTATGGGACCACCTACTGAGTACCGGGTGCTGTGGACGGGGATGTATAGAAACACCTGCCAGTaGTTCACCACCATCAAGTTC +
Preference number: 5 (lower is better)
Translates to: QTFMGPPTEYRVLWTGMYRNTCQ*FTTIKF
Trigger: GAACTTGATGGTGGTGAACAACTGGCAGGTGTTTCT...ATACATCCCCGTCCACAGCACCCGGTACTCAGTAGGTGGTCCCATAAATGTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635811.1
ENST00000637342.1
CDS-3UTR CAA 90 bp ATGAGGCAGGACCCTCAGCAGCATGTAGATTTTGCTGTTGCTGATTGTAAAGGCGACAGGGATGGGATATaGGCATCGCTTCACACTACC +
Preference number: 5 (lower is better)
Translates to: MRQDPQQHVDFAVADCKGDRDGI*ASLHTT
Trigger: GGTAGTGTGAAGCGATGCCAATATCCCATCCCTGTC...GCCTTTACAATCAGCAACAGCAAAATCTACATGCTGCTGAGGGTCCTGCCTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294309.8
CDS-3UTR CAA 90 bp CCACTAGATGGATGGTTCCAAGTTCATTCACTTGTGCCACAAACATTTATGGGAGCCTGCTCTGACCCCTaGTCACCCTTCCCAACTGTG +
Preference number: 5 (lower is better)
Translates to: PLDGWFQVHSLVPQTFMGACSDP*SPFPTV
Trigger: CACAGTTGGGAAGGGTGACAAGGGGTCAGAGCAGGC...TCCCATAAATGTTTGTGGCACAAGTGAATGAACTTGGAACCATCCATCTAGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000635811.1
ENST00000637342.1
ENST00000637504.1
CDS-3UTR CAA 90 bp GGACACAGCCCAATCATATCAGGGATCCTAACCCCGGAGAAAACAAAGGGTCAAAATTCAAGGCAAGATTaGGGTGGGGACACAGCCCAA +
Preference number: 5 (lower is better)
Translates to: GHSPIISGILTPEKTKGQNSRQD*GGDTAQ
Trigger: TTGGGCTGTGTCCCCACCCAAATCTTGCCTTGAATT...TTGACCCTTTGTTTTCTCCGGGGTTAGGATCCCTGATATGATTGGGCTGTGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000635811.1
ENST00000637342.1
ENST00000637504.1
CDS-3UTR CAA 90 bp CCACTAGATGGATGGTTCCAAGTTCATTCACTTGTGCCACAAACATTTATGGGAATCATCACATCGGGGTaGTTGGCCGTGGTCAGCAGC +
Preference number: 5 (lower is better)
Translates to: PLDGWFQVHSLVPQTFMGIITSG*LAVVSS
Trigger: GCTGCTGACCACGGCCAACAACCCCGATGTGATGAT...TCCCATAAATGTTTGTGGCACAAGTGAATGAACTTGGAACCATCCATCTAGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000635811.1
ENST00000637342.1
ENST00000637504.1
CDS-3UTR CAA 90 bp CCACAAGAACAGTACAGGGGAAACCACCCCCGTGATTCAATGATCTCCACCTGGACGCCTCTAAACAAGTaGATCCCAATGATGGCAAAT +
Preference number: 5 (lower is better)
Translates to: PQEQYRGNHPRDSMISTWTPLNK*IPMMAN
Trigger: ATTTGCCATCATTGGGATCAACTTGTTTAGAGGCGT...CCAGGTGGAGATCATTGAATCACGGGGGTGGTTTCCCCTGTACTGTTCTTGTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000635811.1
ENST00000637342.1
ENST00000637504.1
CDS-3UTR CAA 90 bp ATGAGGCAGGACCCTCAGCAGCATGTAGATTTTGCTGTTGCTGATTGTAAAGGCGGAGGCCGCTGCTTCTaGCATTTTTGTCTGAAAGGT +
Preference number: 5 (lower is better)
Translates to: MRQDPQQHVDFAVADCKGGGRCF*HFCLKG
Trigger: ACCTTTCAGACAAAAATGCAAGAAGCAGCGGCCTCC...GCCTTTACAATCAGCAACAGCAAAATCTACATGCTGCTGAGGGTCCTGCCTCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000294309.8
CDS-3UTR CAA 90 bp AATCATATCAGGGATCCTAACCCCGGAGAAAACAAAGGGTCAAGCACTGCTTTTGAGCATCGTGAGGAGTaGATGCTGTTCTGGGGACTC +
Preference number: 5 (lower is better)
Translates to: NHIRDPNPGENKGSSTAFEHREE*MLFWGL
Trigger: GAGTCCCCAGAACAGCATCAACTCCTCACGATGCTC...AAAAGCAGTGCTTGACCCTTTGTTTTCTCCGGGGTTAGGATCCCTGATATGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000635811.1
ENST00000637342.1
ENST00000637504.1
CDS-3UTR CAA 90 bp GGTTCCAAGTTCATTCACTTGTGCCACAAACATTTATGGGACCACCTACTGAGTGAGCATCGTGAGGAGTaGATGCTGTTCTGGGGACTC +
Preference number: 5 (lower is better)
Translates to: GSKFIHLCHKHLWDHLLSEHREE*MLFWGL
Trigger: GAGTCCCCAGAACAGCATCAACTCCTCACGATGCTC...ACTCAGTAGGTGGTCCCATAAATGTTTGTGGCACAAGTGAATGAACTTGGAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000635811.1
ENST00000637342.1
ENST00000637504.1
CDS-3UTR CAA 90 bp CAAACATTTATGGGACCACCTACTGAGTACCGGGTGCTGTGGACGGGGATGTATACTGCTTTTTCTGCATaGCATTCACTGTGGGCTTCA +
Preference number: 5 (lower is better)
Translates to: QTFMGPPTEYRVLWTGMYTAFSA*HSLWAS
Trigger: TGAAGCCCACAGTGAATGCAATGCAGAAAAAGCAGT...ATACATCCCCGTCCACAGCACCCGGTACTCAGTAGGTGGTCCCATAAATGTTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000635811.1
ENST00000637342.1
ENST00000637504.1
CDS-3UTR CAA 90 bp TTCAATGATCTCCACCTGGCCCCACTCCTGACATGTGGGGATCATTACAATTCAACAATGAAGACGCAGTaGAGAATCCCCAGGATGAAG +
Preference number: 5 (lower is better)
Translates to: FNDLHLAPLLTCGDHYNSTMKTQ*RIPRMK
Trigger: CTTCATCCTGGGGATTCTCAACTGCGTCTTCATTGT...TGAATTGTAATGATCCCCACATGTCAGGAGTGGGGCCAGGTGGAGATCATTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000635811.1
ENST00000637342.1
ENST00000637504.1
CDS-3UTR CAA 90 bp CCAATCATATCAGGGATCCTAACCCCGGAGAAAACAAAGGGTCAAGCACTGCTTAGAAACACCTGCCAGTaGTTCACCACCATCAAGTTC +
Preference number: 5 (lower is better)
Translates to: PIISGILTPEKTKGQALLRNTCQ*FTTIKF
Trigger: GAACTTGATGGTGGTGAACAACTGGCAGGTGTTTCT...AAGCAGTGCTTGACCCTTTGTTTTCTCCGGGGTTAGGATCCCTGATATGATTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000635811.1
ENST00000637342.1
CDS-3UTR CAA 90 bp GGTTCCAAGTTCATTCACTTGTGCCACAAACATTTATGGGACCACCTACTGAGTCTGTTCTGTAGATGGTaGTTGGGCCACACGCAAAGG +
Preference number: 5 (lower is better)
Translates to: GSKFIHLCHKHLWDHLLSLFCRW*LGHTQR
Trigger: CCTTTGCGTGTGGCCCAACAACCATCTACAGAACAG...ACTCAGTAGGTGGTCCCATAAATGTTTGTGGCACAAGTGAATGAACTTGGAACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635811.1
CDS-3UTR CAA 90 bp CAATTTCCACTAGATGGATGGTTCCAAGTTCATTCACTTGTGCCACAAACATTTGCCTGCTCTGACCCCTaGTCACCCTTCCCAACTGTG +
Preference number: 5 (lower is better)
Translates to: QFPLDGWFQVHSLVPQTFACSDP*SPFPTV
Trigger: CACAGTTGGGAAGGGTGACAAGGGGTCAGAGCAGGC...AAATGTTTGTGGCACAAGTGAATGAACTTGGAACCATCCATCTAGTGGAAATTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000635811.1
ENST00000637342.1
ENST00000637504.1
CDS-3UTR CAA 90 bp CAGGTTGACCCAGATGACAGACGACACCAGCCACCACAATACAAAATAGATCTTAATTCAAGGCAAGATTaGGGTGGGGACACAGCCCAA +
Preference number: 5 (lower is better)
Translates to: QVDPDDRRHQPPQYKIDLNSRQD*GGDTAQ
Trigger: TTGGGCTGTGTCCCCACCCAAATCTTGCCTTGAATT...AAGATCTATTTTGTATTGTGGTGGCTGGTGTCGTCTGTCATCTGGGTCAACCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635811.1
CDS-3UTR CAA 90 bp ATGTGGGGATCATTACAATTCAAGGCAAGATTTGGGTGGGGACACAGCCCAATCGAAGCTCAAAGTCCGTaGGCATACGTTCGAGTAATA +
Preference number: 5 (lower is better)
Translates to: MWGSLQFKARFGWGHSPIEAQSP*AYVRVI
Trigger: TATTACTCGAACGTATGCCAACGGACTTTGAGCTTC...GATTGGGCTGTGTCCCCACCCAAATCTTGCCTTGAATTGTAATGATCCCCACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000635811.1
ENST00000637342.1
ENST00000637504.1
CDS-3UTR CAA 90 bp CTCCATTCAAAAGAACAGGTCTTCTTAGAGCTGCAGCTCACTCCAATAAATGAATGTTTGCTGAAGGTTTaGGCAGCAGGGCGTCCACAC +
Preference number: 5 (lower is better)
Translates to: LHSKEQVFLELQLTPINECLLKV*AAGRPH
Trigger: GTGTGGACGCCCTGCTGCCAAAACCTTCAGCAAACA...TTCATTTATTGGAGTGAGCTGCAGCTCTAAGAAGACCTGTTCTTTTGAATGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294309.8
CDS-3UTR CAA 90 bp TGGTTCCAAGTTCATTCACTTGTGCCACAAACATTTATGGGACCACCTACTGAGAATTCAAGGCAAGATTaGGGTGGGGACACAGCCCAA +
Preference number: 5 (lower is better)
Translates to: WFQVHSLVPQTFMGPPTENSRQD*GGDTAQ
Trigger: TTGGGCTGTGTCCCCACCCAAATCTTGCCTTGAATT...CTCAGTAGGTGGTCCCATAAATGTTTGTGGCACAAGTGAATGAACTTGGAACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000635811.1
ENST00000637342.1
ENST00000637504.1
CDS-3UTR CAA 90 bp AGCCTTGACCCTGGCTTTCACGGTCCATTGGGTTTTGTTATAATTTACAATTTCTTAATTGACTCACAGTaGCACATGGCCAGGGAGGCC +
Preference number: 5 (lower is better)
Translates to: SLDPGFHGPLGFVIIYNFLIDSQ*HMAREA
Trigger: GGCCTCCCTGGCCATGTGCAACTGTGAGTCAATTAA...GAAATTGTAAATTATAACAAAACCCAATGGACCGTGAAAGCCAGGGTCAAGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635811.1
ENST00000637504.1
CDS-3UTR CAA 90 bp AGCCTTGACCCTGGCTTTCACGGTCCATTGGGTTTTGTTATAATTTACAATTTCTTCTGTAGATGGTTGTaGGGCCACACGCAAAGGACT +
Preference number: 5 (lower is better)
Translates to: SLDPGFHGPLGFVIIYNFFCRWL*GHTQRT
Trigger: AGTCCTTTGCGTGTGGCCCAACAACCATCTACAGAA...GAAATTGTAAATTATAACAAAACCCAATGGACCGTGAAAGCCAGGGTCAAGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635811.1
CDS-3UTR CAA 90 bp CCAATCATATCAGGGATCCTAACCCCGGAGAAAACAAAGGGTCAAGCACTGCTTGGCTTTCACGGTCCATaGGGTTTTGTTATAATTTAC +
Preference number: 5 (lower is better)
Translates to: PIISGILTPEKTKGQALLGFHGP*GFVIIY
Trigger: GTAAATTATAACAAAACCCAATGGACCGTGAAAGCC...AAGCAGTGCTTGACCCTTTGTTTTCTCCGGGGTTAGGATCCCTGATATGATTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000635811.1
ENST00000637342.1
ENST00000637504.1
CDS-3UTR CAA 90 bp CCACTAGATGGATGGTTCCAAGTTCATTCACTTGTGCCACAAACATTTATGGGAACGCCTCTAAACAAGTaGATCCCAATGATGGCAAAT +
Preference number: 5 (lower is better)
Translates to: PLDGWFQVHSLVPQTFMGTPLNK*IPMMAN
Trigger: ATTTGCCATCATTGGGATCAACTTGTTTAGAGGCGT...TCCCATAAATGTTTGTGGCACAAGTGAATGAACTTGGAACCATCCATCTAGTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000635811.1
ENST00000637342.1
ENST00000637504.1
CDS-3UTR CAA 90 bp AATTTACAATTTCCACTAGATGGATGGTTCCAAGTTCATTCACTTGTGCCACAAGGCTTTCACGGTCCATaGGGTTTTGTTATAATTTAC +
Preference number: 5 (lower is better)
Translates to: NLQFPLDGWFQVHSLVPQGFHGP*GFVIIY
Trigger: GTAAATTATAACAAAACCCAATGGACCGTGAAAGCC...TTGTGGCACAAGTGAATGAACTTGGAACCATCCATCTAGTGGAAATTGTAAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000635811.1
ENST00000637342.1
ENST00000637504.1
CDS CCA 90 bp TTTAATTACAAAAGAAAAGAAGGCTTCGCTACAGCAACACTAATCTaGGCGGCCCTTAAAGGAATTATTATAAAGCTCATCTCTAACACA +
Preference number: 5 (lower is better)
Translates to: FNYKRKEGFATATLI*AALKGIIIKLISNT
Trigger: TGTGTTAGAGATGAGCTTTATAATAATTCCTTTAAGGGCCGCCCAGATTAGTGTTGCTGTAGCGAAGCCTTCTTTTCTTTTGTAATTAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535009.5
CDS GCA 72 bp CCCACCTGGCCGCGGCACCAGGGCCGACTTGGATGCTaGGGTAAGTGGTCAGCCCCGCCGGCCAGTCGCCGC +
Preference number: 6 (lower is better)
Translates to: PTWPRHQGRLGC*GKWSAPPASRR
Trigger: GCGGCGACTGGCCGGCGGGGCTGACCACTTACCGCAGCATCCAAGTCGGCCCTGGTGCCGCGGCCAGGTGGG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000294309.8
ENST00000534832.1
ENST00000535009.5
ENST00000542467.1
ENST00000635811.1
ENST00000637342.1
ENST00000637504.1
CDS GCA 72 bp GGTCCCACCTGGCCGCGGCACCAGGGCCGACTTGGATaGTGCGGTAAGTGGTCAGCCCCGCCGGCCAGTCGC +
Preference number: 6 (lower is better)
Translates to: GPTWPRHQGRLG*CGKWSAPPASR
Trigger: GCGACTGGCCGGCGGGGCTGACCACTTACCGCAGCATCCAAGTCGGCCCTGGTGCCGCGGCCAGGTGGGACC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000294309.8
ENST00000534832.1
ENST00000535009.5
ENST00000542467.1
ENST00000635811.1
ENST00000637342.1
ENST00000637504.1
CDS CAA 72 bp TCCAGCTGCTCGAAGCTCCCACAGGGCGCCGAGCCATaGGCAGGGGCCAGGCACCAGGATCCCGCCAAACGC +
Preference number: 6 (lower is better)
Translates to: SSCSKLPQGAEP*AGARHQDPAKR
Trigger: GCGTTTGGCGGGATCCTGGTGCCTGGCCCCTGCCAATGGCTCGGCGCCCTGTGGGAGCTTCGAGCAGCTGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442692.2
CDS GCA 72 bp CCAGGCACCAGGATCCCGCCAAACGCACGCATGTTCTaGACCAGGCCCAGGACGGTACTGGCCACCACGGCC +
Preference number: 6 (lower is better)
Translates to: PGTRIPPNARMF*TRPRTVLATTA
Trigger: GGCCGTGGTGGCCAGTACCGTCCTGGGCCTGGTGCAGAACATGCGTGCGTTTGGCGGGATCCTGGTGCCTGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442692.2
CDS GCA 72 bp ACCACCACCAGGATCCCGCCAAACGCACGCATGTTCTaGACCAGGCCCAGGACGGTACTGGCCACCACGGCC +
Preference number: 6 (lower is better)
Translates to: TTTRIPPNARMF*TRPRTVLATTA
Trigger: GGCCGTGGTGGCCAGTACCGTCCTGGGCCTGGTGCAGAACATGCGTGCGTTTGGCGGGATCCTGGTGGTGGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294309.8
ENST00000635811.1
ENST00000637342.1
ENST00000637504.1
CDS CAA 90 bp GCTCCACCCTCAGTTCTCTTAACCTACAGTCCAGCAATGGAGGCCTaGGACCCAGTCAGTCGCCCCTGGAGGGGCGAGCCAATCGGAGGG +
Preference number: 6 (lower is better)
Translates to: APPSVLLTYSPAMEA*DPVSRPWRGEPIGG
Trigger: CCCTCCGATTGGCTCGCCCCTCCAGGGGCGACTGACTGGGTCCAAGGCCTCCATTGCTGGACTGTAGGTTAAGAGAACTGAGGGTGGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534832.1
CDS TCA 72 bp TGCGTCCAGGATGCAGAAGACAAGTCCTCCGGGGACTaGCGAAGAGCCGTGCCCAGAGGCTCCACCCTCAGT +
Preference number: 6 (lower is better)
Translates to: CVQDAEDKSSGD*RRAVPRGSTLS
Trigger: ACTGAGGGTGGAGCCTCTGGGCACGGCTCTTCGTCAGTCCCCGGAGGACTTGTCTTCTGCATCCTGGACGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534832.1
CDS CCA 72 bp CACCGTCAGGAGCATCGTGAGGAGTTGATGCTGTTCTaGGGACTCCACGTGAGAGCCTCCTGGGTCAGGGCC +
Preference number: 6 (lower is better)
Translates to: HRQEHREELMLF*GLHVRASWVRA
Trigger: GGCCCTGACCCAGGAGGCTCTCACGTGGAGTCCCCAGAACAGCATCAACTCCTCACGATGCTCCTGACGGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637342.1
CDS CAA 90 bp GGGCATGGAGAGTCTGTCCACCACCGTCAGGAGCATCGTGAGGAGTaGATGCTGTTCTGGGGACTCCACGTGAGAGCCTCCTGGGTCAGG +
Preference number: 6 (lower is better)
Translates to: GHGESVHHRQEHREE*MLFWGLHVRASWVR
Trigger: CCTGACCCAGGAGGCTCTCACGTGGAGTCCCCAGAACAGCATCAACTCCTCACGATGCTCCTGACGGTGGTGGACAGACTCTCCATGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637342.1
CDS CCA 72 bp CAGGATGCCCCCACCCACCCGGGACCTAGAATGGGGTaGTCCACAACAGGCCTCAGAACACGGTGCATCAAA +
Preference number: 6 (lower is better)
Translates to: QDAPTHPGPRMG*STTGLRTRCIK
Trigger: TTTGATGCACCGTGTTCTGAGGCCTGTTGTGGACCACCCCATTCTAGGTCCCGGGTGGGTGGGGGCATCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534832.1
CDS TCA 72 bp GCCTCGGATGCGCCTACTTTACCAGCAGGACAACGGTaGGGAGCCCGTCAAACACGTTGCTGGGGTAGGACA +
Preference number: 6 (lower is better)
Translates to: ASDAPTLPAGQR*GARQTRCWGRT
Trigger: TGTCCTACCCCAGCAACGTGTTTGACGGGCTCCTCACCGTTGTCCTGCTGGTAAAGTAGGCGCATCCGAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535009.5
CDS GCA 72 bp GCTGGAAAGACACCCTGGCCTCAGGAATCGGGGGACTaGACAGATTGGGGTGGCAGAGGTGGCAGAGAAGAT +
Preference number: 6 (lower is better)
Translates to: AGKTPWPQESGD*TDWGGRGGRED
Trigger: ATCTTCTCTGCCACCTCTGCCACCCCAATCTGTGCAGTCCCCCGATTCCTGAGGCCAGGGTGTCTTTCCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000535009.5
CDS CCA 72 bp ACACCCTGGCCTCAGGAATCGGGGGACTGCACAGATTaGGGTGGCAGAGGTGGCAGAGAAGATACTGAGTCA +
Preference number: 6 (lower is better)
Translates to: TPWPQESGDCTD*GGRGGREDTES
Trigger: TGACTCAGTATCTTCTCTGCCACCTCTGCCACCCCAATCTGTGCAGTCCCCCGATTCCTGAGGCCAGGGTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000535009.5
CDS TCA 72 bp GGTCCCACTTGTGAAGGAAGTTCAGCAGGACAACGGTaGGGAGCCCGTCAAACACGTTGCTGGGGTAGGACA +
Preference number: 6 (lower is better)
Translates to: GPTCEGSSAGQR*GARQTRCWGRT
Trigger: TGTCCTACCCCAGCAACGTGTTTGACGGGCTCCTCACCGTTGTCCTGCTGAACTTCCTTCACAAGTGGGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542467.1
CDS CCA 72 bp CACGGGTTGGTTCCAGATGTCAGGACTTCTTTCAGCTaGAAAGACACCCTGGCCTCAGGAATCGGGGGACTG +
Preference number: 6 (lower is better)
Translates to: HGLVPDVRTSFS*KDTLASGIGGL
Trigger: CAGTCCCCCGATTCCTGAGGCCAGGGTGTCTTTCCAGCTGAAAGAAGTCCTGACATCTGGAACCAACCCGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000535009.5
CDS TCA 72 bp GGAACACGCAAATGGACACCAGGTTTGCCAGGGCGATaGGGTTCCCCAGGTAGTCAAAGTAGTAGTGGCCGA +
Preference number: 6 (lower is better)
Translates to: GTRKWTPGLPGR*GSPGSQSSSGR
Trigger: TCGGCCACTACTACTTTGACTACCTGGGGAACCTCATCGCCCTGGCAAACCTGGTGTCCATTTGCGTGTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000294309.8
ENST00000442692.2
ENST00000535009.5
ENST00000542467.1
ENST00000635811.1
ENST00000637342.1
ENST00000637504.1
CDS TCA 72 bp CCAGAGTTGAGATCTCCAAAACCAGCAGGACAACGGTaGGGAGCCCGTCAAACACGTTGCTGGGGTAGGACA +
Preference number: 6 (lower is better)
Translates to: PELRSPKPAGQR*GARQTRCWGRT
Trigger: TGTCCTACCCCAGCAACGTGTTTGACGGGCTCCTCACCGTTGTCCTGCTGGTTTTGGAGATCTCAACTCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294309.8
ENST00000637342.1
CDS GCA 72 bp AACAGGCCTCAGAACACGGTGCATCAAAGCAGCAAATaGGTCCAGGATGCAGAAGACAAGTCCTCCGGGGAC +
Preference number: 6 (lower is better)
Translates to: NRPQNTVHQSSK*VQDAEDKSSGD
Trigger: GTCCCCGGAGGACTTGTCTTCTGCATCCTGGACGCATTTGCTGCTTTGATGCACCGTGTTCTGAGGCCTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534832.1
CDS GCA 72 bp AGAATGGGGTGGTCCACAACAGGCCTCAGAACACGGTaGATCAAAGCAGCAAATGCGTCCAGGATGCAGAAG +
Preference number: 6 (lower is better)
Translates to: RMGWSTTGLRTR*IKAANASRMQK
Trigger: CTTCTGCATCCTGGACGCATTTGCTGCTTTGATGCACCGTGTTCTGAGGCCTGTTGTGGACCACCCCATTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534832.1
CDS CCA 72 bp GGGAGAAATCAGAGCTTGGTCCTGGACCCCACGGGTTaGTTCCAGATGTCAGGACTTCTTTCAGCTGGAAAG +
Preference number: 6 (lower is better)
Translates to: GRNQSLVLDPTG*FQMSGLLSAGK
Trigger: CTTTCCAGCTGAAAGAAGTCCTGACATCTGGAACCAACCCGTGGGGTCCAGGACCAAGCTCTGATTTCTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535009.5
CDS CAA 72 bp GGGGAGAAATCAGAGCTTGGTCCTGGACCCCACGGGTaGGTTCCAGATGTCAGGACTTCTTTCAGCTGGAAA +
Preference number: 6 (lower is better)
Translates to: GEKSELGPGPHG*VPDVRTSFSWK
Trigger: TTTCCAGCTGAAAGAAGTCCTGACATCTGGAACCAACCCGTGGGGTCCAGGACCAAGCTCTGATTTCTCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535009.5
CDS CCA 72 bp TCAAATTTCTCTTCACCTATGTGCCGAGGGGCCTGCTaGCTACAGCAAACGTCACTCTCATGTGGCTGCTTG +
Preference number: 6 (lower is better)
Translates to: SNFSSPMCRGAC*LQQTSLSCGCL
Trigger: CAAGCAGCCACATGAGAGTGACGTTTGCTGTAGCCAGCAGGCCCCTCGGCACATAGGTGAAGAGAAATTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535009.5
CDS GCA 72 bp AGAGCTTCTGAAACTCCTCAGCTGAGAGCAGAACACTaGCATAGGAACGCACCTTCTCCATCATGGCCTGTT +
Preference number: 6 (lower is better)
Translates to: RASETPQLRAEH*HRNAPSPSWPV
Trigger: AACAGGCCATGATGGAGAAGGTGCGTTCCTATGGCAGTGTTCTGCTCTCAGCTGAGGAGTTTCAGAAGCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000294309.8
ENST00000535009.5
ENST00000542467.1
ENST00000635811.1
ENST00000637342.1
ENST00000637504.1
CDS GCA 72 bp TTTTCAAATTTCTCTTCACCTATGTGCCGAGGGGCCTaGTGGCTACAGCAAACGTCACTCTCATGTGGCTGC +
Preference number: 6 (lower is better)
Translates to: FSNFSSPMCRGA*WLQQTSLSCGC
Trigger: GCAGCCACATGAGAGTGACGTTTGCTGTAGCCAGCAGGCCCCTCGGCACATAGGTGAAGAGAAATTTGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535009.5
CDS TCA 72 bp GAGATTTCATCAGGTAGCCCCGGAACTGACTGTAGATaGTGGCTGTCAGCAGGTTCATCAGAAACAGGCTTC +
Preference number: 6 (lower is better)
Translates to: EISSGSPGTDCR*WLSAGSSETGF
Trigger: GAAGCCTGTTTCTGATGAACCTGCTGACAGCCATCATCTACAGTCAGTTCCGGGGCTACCTGATGAAATCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000294309.8
ENST00000442692.2
ENST00000535009.5
ENST00000542467.1
ENST00000635811.1
ENST00000637342.1
ENST00000637504.1
CDS CCA 72 bp AAAAGAAAAGAAGGCTTCGCTACAGCAACACTAATCTaGGCGGCCCTTAAAGGAATTATTATAAAGCTCATC +
Preference number: 6 (lower is better)
Translates to: KRKEGFATATLI*AALKGIIIKLI
Trigger: GATGAGCTTTATAATAATTCCTTTAAGGGCCGCCCAGATTAGTGTTGCTGTAGCGAAGCCTTCTTTTCTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535009.5