RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TP73 (Homo sapiens)

Ensembl gene IDs: ENSG00000078900

Ensembl transcript IDs: ENST00000346387.8, ENST00000354437.8, ENST00000357733.7, ENST00000378280.5, ENST00000378285.5, ENST00000378288.8, ENST00000378290.4, ENST00000378295.9, ENST00000603362.5, ENST00000603364.5, ENST00000604074.5, ENST00000604194.1, ENST00000604479.5, ENST00000604566.1

Found 1853 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TCAGGGCCGCCGCCTGGGCCGCCGCGGTTGGGGATGGTGATGGTGTaGCGCACGCGGAAGTGCACGGCCTCCATGACCCGCTGGCGCTGC +
Preference number: 1 (lower is better)
Translates to: SGPPPGPPRLGMVMV*RTRKCTASMTRWRC
Trigger: GCAGCGCCAGCGGGTCATGGAGGCCGTGCACTTCCGCGTGCGCCACACCATCACCATCCCCAACCGCGGCGGCCCAGGCGGCGGCCCTGA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
3UTR GCA 90 bp GGGCCGCCGCGGTTGGGGATGGTGATGGTGTGGCGCACGCGGAAGTaGACGGCCTCCATGACCCGCTGGCGCTGCAGTTCCCCTGAGCCG +
Preference number: 1 (lower is better)
Translates to: GPPRLGMVMVWRTRK*TASMTRWRCSSPEP
Trigger: CGGCTCAGGGGAACTGCAGCGCCAGCGGGTCATGGAGGCCGTGCACTTCCGCGTGCGCCACACCATCACCATCCCCAACCGCGGCGGCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
3UTR GCA 90 bp GGCAGGGGGTGTGGAGCTGGCCGTGCCAGAAGGGGCCAGGCAGCCTaGACTCTGGGTGGTGTCTCGGCTTGCGTGGGTGAGGGCTCCCAT +
Preference number: 1 (lower is better)
Translates to: GRGCGAGRARRGQAA*TLGGVSACVGEGSH
Trigger: ATGGGAGCCCTCACCCACGCAAGCCGAGACACCACCCAGAGTGCAGGCTGCCTGGCCCCTTCTGGCACGGCCAGCTCCACACCCCCTGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR CCA 90 bp GTGATGGTGTGGCGCACGCGGAAGTGCACGGCCTCCATGACCCGCTaGCGCTGCAGTTCCCCTGAGCCGCCGATGGAGATGGTGGCCGCG +
Preference number: 1 (lower is better)
Translates to: VMVWRTRKCTASMTR*RCSSPEPPMEMVAA
Trigger: CGCGGCCACCATCTCCATCGGCGGCTCAGGGGAACTGCAGCGCCAGCGGGTCATGGAGGCCGTGCACTTCCGCGTGCGCCACACCATCAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
3UTR TCA 90 bp GCGGAAGTGCACGGCCTCCATGACCCGCTGGCGCTGCAGTTCCCCTaGGCCGCCGATGGAGATGGTGGCCGCGTTGCTAGAGCGGAGCAG +
Preference number: 1 (lower is better)
Translates to: AEVHGLHDPLALQFP*AADGDGGRVARAEQ
Trigger: CTGCTCCGCTCTAGCAACGCGGCCACCATCTCCATCGGCGGCTCAGGGGAACTGCAGCGCCAGCGGGTCATGGAGGCCGTGCACTTCCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
3UTR GCA 90 bp GTGTGGCGCACGCGGAAGTGCACGGCCTCCATGACCCGCTGGCGCTaGAGTTCCCCTGAGCCGCCGATGGAGATGGTGGCCGCGTTGCTA +
Preference number: 1 (lower is better)
Translates to: VWRTRKCTASMTRWR*SSPEPPMEMVAALL
Trigger: TAGCAACGCGGCCACCATCTCCATCGGCGGCTCAGGGGAACTGCAGCGCCAGCGGGTCATGGAGGCCGTGCACTTCCGCGTGCGCCACAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
3UTR GCA 90 bp GAAGGAGAGGGGAGGCAGCTTGGGTCTCTGGGCGGTGGCGCAGGCTaGAGCCAGGCGAGGCCCTCAGTGGATCTCGGCCTCCGTGAACTC +
Preference number: 1 (lower is better)
Translates to: EGEGRQLGSLGGGAG*SQARPSVDLGLREL
Trigger: GAGTTCACGGAGGCCGAGATCCACTGAGGGCCTCGCCTGGCTGCAGCCTGCGCCACCGCCCAGAGACCCAAGCTGCCTCCCCTCTCCTTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
3UTR CCA 90 bp GGTGTGGAGCTGGCCGTGCCAGAAGGGGCCAGGCAGCCTGCACTCTaGGTGGTGTCTCGGCTTGCGTGGGTGAGGGCTCCCATTGGCCCA +
Preference number: 1 (lower is better)
Translates to: GVELAVPEGARQPAL*VVSRLAWVRAPIGP
Trigger: TGGGCCAATGGGAGCCCTCACCCACGCAAGCCGAGACACCACCCAGAGTGCAGGCTGCCTGGCCCCTTCTGGCACGGCCAGCTCCACACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR CCA 90 bp CGGCCAGAGCTTCCTGCCCTTCAGCTGGAAGGAGCCGGAAGGAGCTaGAAGGAAGGGCCAGGCCCTCGCCCTGGCTGCAGCCAGATCCCC +
Preference number: 1 (lower is better)
Translates to: RPELPALQLEGAGRS*KEGPGPRPGCSQIP
Trigger: GGGGATCTGGCTGCAGCCAGGGCGAGGGCCTGGCCCTTCCTTCCAGCTCCTTCCGGCTCCTTCCAGCTGAAGGGCAGGAAGCTCTGGCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR CCA 90 bp GGTCTCTGGGCGGTGGCGCAGGCTGCAGCCAGGCGAGGCCCTCAGTaGATCTCGGCCTCCGTGAACTCCTCCTTGATGGGCTGCTTGCGG +
Preference number: 1 (lower is better)
Translates to: GLWAVAQAAARRGPQ*ISASVNSSLMGCLR
Trigger: CCGCAAGCAGCCCATCAAGGAGGAGTTCACGGAGGCCGAGATCCACTGAGGGCCTCGCCTGGCTGCAGCCTGCGCCACCGCCCAGAGACC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
3UTR CCA 90 bp GGACACACAGGAAGGAGAGGGGAGGCAGCTTGGGTCTCTGGGCGGTaGCGCAGGCTGCAGCCAGGCGAGGCCCTCAGTGGATCTCGGCCT +
Preference number: 1 (lower is better)
Translates to: GHTGRRGEAAWVSGR*RRLQPGEALSGSRP
Trigger: AGGCCGAGATCCACTGAGGGCCTCGCCTGGCTGCAGCCTGCGCCACCGCCCAGAGACCCAAGCTGCCTCCCCTCTCCTTCCTGTGTGTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
3UTR TCA 90 bp GGGCCAGGCAGCCTGCACTCTGGGTGGTGTCTCGGCTTGCGTGGGTaGGGGCTCCCATTGGCCCACCTGCCTGCAATGAAGGGCCTCGTC +
Preference number: 1 (lower is better)
Translates to: GPGSLHSGWCLGLRG*GLPLAHLPAMKGLV
Trigger: GACGAGGCCCTTCATTGCAGGCAGGTGGGCCAATGGGAGCCCTCACCCACGCAAGCCGAGACACCACCCAGAGTGCAGGCTGCCTGGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR GCA 90 bp GCTGTCAGCGGCCCCCGGGGAGGTGGACGGTGGGAGAGGGATGCCTaGGTCTTCGTAGACCAGGTACCTGCGGCAACACCAGTCGCTGCT +
Preference number: 1 (lower is better)
Translates to: AVSGPRGGGRWERDA*VFVDQVPAATPVAA
Trigger: AGCAGCGACTGGTGTTGCCGCAGGTACCTGGTCTACGAAGACGCAGGCATCCCTCTCCCACCGTCCACCTCCCCGGGGGCCGCTGACAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR GCA 90 bp CTGTGCTGTCAGCGGCCCCCGGGGAGGTGGACGGTGGGAGAGGGATaGCTGCGTCTTCGTAGACCAGGTACCTGCGGCAACACCAGTCGC +
Preference number: 1 (lower is better)
Translates to: LCCQRPPGRWTVGEG*LRLRRPGTCGNTSR
Trigger: GCGACTGGTGTTGCCGCAGGTACCTGGTCTACGAAGACGCAGGCATCCCTCTCCCACCGTCCACCTCCCCGGGGGCCGCTGACAGCACAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR GCA 90 bp GAGATGACAGTCTCTAGGATGAAGCCTGGAAGTCGGAGCCGACGCTaGGGTCCCCACCCACGCCTGCCATGGAGCACGCCGGGGCAGTGG +
Preference number: 1 (lower is better)
Translates to: EMTVSRMKPGSRSRR*GPHPRLPWSTPGQW
Trigger: CCACTGCCCCGGCGTGCTCCATGGCAGGCGTGGGTGGGGACCGCAGCGTCGGCTCCGACTTCCAGGCTTCATCCTAGAGACTGTCATCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR GCA 90 bp GGCCCTCAGTGGATCTCGGCCTCCGTGAACTCCTCCTTGATGGGCTaGTTGCGGGCCTTGCAGTCGGGCAGGTCGAAGCCGAAGTCCGCC +
Preference number: 1 (lower is better)
Translates to: GPQWISASVNSSLMG*LRALQSGRSKPKSA
Trigger: GGCGGACTTCGGCTTCGACCTGCCCGACTGCAAGGCCCGCAAGCAGCCCATCAAGGAGGAGTTCACGGAGGCCGAGATCCACTGAGGGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
3UTR CCA 90 bp GGTCGGGCTCCTGGGTACAGCAAGGGCTTCCCAGCAGCCCAGGCCTaGTGGGAACGCTGGGGGAATGGGGGAGAGTCGCTGTTTCTGACC +
Preference number: 1 (lower is better)
Translates to: GRAPGYSKGFPAAQA*WERWGNGGESLFLT
Trigger: GGTCAGAAACAGCGACTCTCCCCCATTCCCCCAGCGTTCCCACCAGGCCTGGGCTGCTGGGAAGCCCTTGCTGTACCCAGGAGCCCGACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR GCA 90 bp AGCTGTGCTCCGGGACGGTCAAGGTTCGGCCACCAAGGCTCAGGCTaGTCCTCGTGGATGGAGGTGGCCCCAGAAAGGGCCTGTGCAGAC +
Preference number: 1 (lower is better)
Translates to: SCAPGRSRFGHQGSG*SSWMEVAPERACAD
Trigger: GTCTGCACAGGCCCTTTCTGGGGCCACCTCCATCCACGAGGAGCAGCCTGAGCCTTGGTGGCCGAACCTTGACCGTCCCGGAGCACAGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR CCA 90 bp CCGGGACGGTCAAGGTTCGGCCACCAAGGCTCAGGCTGCTCCTCGTaGATGGAGGTGGCCCCAGAAAGGGCCTGTGCAGACTCTGTCTCC +
Preference number: 1 (lower is better)
Translates to: PGRSRFGHQGSGCSS*MEVAPERACADSVS
Trigger: GGAGACAGAGTCTGCACAGGCCCTTTCTGGGGCCACCTCCATCCACGAGGAGCAGCCTGAGCCTTGGTGGCCGAACCTTGACCGTCCCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR CCA 90 bp CCCTTCCTGGGGTTCCCTCTAGGCTTCCTCCCCACCCGGCCTTCCTaGGAACAAGTCCCGCCCACCTGGCTTCTCACTCAGCTTCCTCAG +
Preference number: 1 (lower is better)
Translates to: PFLGFPLGFLPTRPS*EQVPPTWLLTQLPQ
Trigger: CTGAGGAAGCTGAGTGAGAAGCCAGGTGGGCGGGACTTGTTCCCAGGAAGGCCGGGTGGGGAGGAAGCCTAGAGGGAACCCCAGGAAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR CCA 90 bp GGGTACAGCAAGGGCTTCCCAGCAGCCCAGGCCTGGTGGGAACGCTaGGGGAATGGGGGAGAGTCGCTGTTTCTGACCAGAGCGACTTGG +
Preference number: 1 (lower is better)
Translates to: GYSKGFPAAQAWWER*GNGGESLFLTRATW
Trigger: CCAAGTCGCTCTGGTCAGAAACAGCGACTCTCCCCCATTCCCCCAGCGTTCCCACCAGGCCTGGGCTGCTGGGAAGCCCTTGCTGTACCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR GCA 90 bp GTTGTTGTTAGGGGCAGGAAGGAGGCGGTCCTGCAGAATACAGCGTaGTGGGGGCAGAGGCCAGTCCCAAGTCCAGCAGAGAGAGTCCCC +
Preference number: 1 (lower is better)
Translates to: VVVRGRKEAVLQNTA*WGQRPVPSPAERVP
Trigger: GGGGACTCTCTCTGCTGGACTTGGGACTGGCCTCTGCCCCCAGCACGCTGTATTCTGCAGGACCGCCTCCTTCCTGCCCCTAACAACAAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR GCA 90 bp CCTGACTGCCACCGCCTAGAAAGGAAAGCAATGCCCTGTGGACCTTaGAGTGCTAGAGAAGGTGGCCGTGGCAAGGGAGGAGCTGCTCCC +
Preference number: 1 (lower is better)
Translates to: PDCHRLERKAMPCGP*SAREGGRGKGGAAP
Trigger: GGGAGCAGCTCCTCCCTTGCCACGGCCACCTTCTCTAGCACTGCAAGGTCCACAGGGCATTGCTTTCCTTTCTAGGCGGTGGCAGTCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR GCA 90 bp TCAGCAACACTGTGGTTGTTGTTAGGGGCAGGAAGGAGGCGGTCCTaGAGAATACAGCGTGCTGGGGGCAGAGGCCAGTCCCAAGTCCAG +
Preference number: 1 (lower is better)
Translates to: SATLWLLLGAGRRRS*RIQRAGGRGQSQVQ
Trigger: CTGGACTTGGGACTGGCCTCTGCCCCCAGCACGCTGTATTCTGCAGGACCGCCTCCTTCCTGCCCCTAACAACAACCACAGTGTTGCTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR GCA 90 bp TGGCAAGGGAGGAGCTGCTCCCATGGCAGAGCATTCCTGCAGATTTaGCTGGATTTGCCCTTCCTGGGGTTCCCTCTAGGCTTCCTCCCC +
Preference number: 1 (lower is better)
Translates to: WQGRSCSHGRAFLQI*LDLPFLGFPLGFLP
Trigger: GGGGAGGAAGCCTAGAGGGAACCCCAGGAAGGGCAAATCCAGGCAAATCTGCAGGAATGCTCTGCCATGGGAGCAGCTCCTCCCTTGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR CCA 90 bp AAGAAACAAATCAACAAGCCCTCTGGAACTGAAGCACATCTGCGCTaGGCTGAGGAACCCCGGGTGTCAGGATGGGCCCCCGCGGCTCCT +
Preference number: 1 (lower is better)
Translates to: KKQINKPSGTEAHLR*AEEPRVSGWAPAAP
Trigger: AGGAGCCGCGGGGGCCCATCCTGACACCCGGGGTTCCTCAGCCCAGCGCAGATGTGCTTCAGTTCCAGAGGGCTTGTTGATTTGTTTCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR GCA 90 bp TACCTAAGAAACAAATCAACAAGCCCTCTGGAACTGAAGCACATCTaGGCTGGGCTGAGGAACCCCGGGTGTCAGGATGGGCCCCCGCGG +
Preference number: 1 (lower is better)
Translates to: YLRNKSTSPLELKHI*AGLRNPGCQDGPPR
Trigger: CCGCGGGGGCCCATCCTGACACCCGGGGTTCCTCAGCCCAGCGCAGATGTGCTTCAGTTCCAGAGGGCTTGTTGATTTGTTTCTTAGGTA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR GCA 90 bp GTCGCTGTTTCTGACCAGAGCGACTTGGACAGATGTGAGCTGACCTaGCTGGCGAGCTCCTTCTGCCTTGCCTCTCTGAGCAGACTCAGG +
Preference number: 1 (lower is better)
Translates to: VAVSDQSDLDRCELT*LASSFCLASLSRLR
Trigger: CCTGAGTCTGCTCAGAGAGGCAAGGCAGAAGGAGCTCGCCAGGCAGGTCAGCTCACATCTGTCCAAGTCGCTCTGGTCAGAAACAGCGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR TCA 90 bp GTCCCCAGCCCCCGGCGCGGGCAAGACGCAGTTAGGGACATTCCCTaGAAATACACTGGTGTTTCAGACACAGTCACTTGGCTGCTCACT +
Preference number: 1 (lower is better)
Translates to: VPSPRRGQDAVRDIP*KYTGVSDTVTWLLT
Trigger: AGTGAGCAGCCAAGTGACTGTGTCTGAAACACCAGTGTATTTTCAGGGAATGTCCCTAACTGCGTCTTGCCCGCGCCGGGGGCTGGGGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR TCA 90 bp CAGAGGAGTGGATGTTTGTGCGTTGGAGACACTGACTGTTCTGAGTaGCAAGTGGCTCTGTGCCAGGATACTGCGGGTCGGGCTCCTGGG +
Preference number: 1 (lower is better)
Translates to: QRSGCLCVGDTDCSE*QVALCQDTAGRAPG
Trigger: CCCAGGAGCCCGACCCGCAGTATCCTGGCACAGAGCCACTTGTCACTCAGAACAGTCAGTGTCTCCAACGCACAAACATCCACTCCTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR GCA 90 bp TCAACTCTGTCTACTTTCACAGCTGCTTCTCCAGTGCAAGGAGGCTaGATGGGCTCCCTAGACAGGTGCAGCTGGGGCCATCTGGCTGCT +
Preference number: 1 (lower is better)
Translates to: STLSTFTAASPVQGG*MGSLDRCSWGHLAA
Trigger: AGCAGCCAGATGGCCCCAGCTGCACCTGTCTAGGGAGCCCATGCAGCCTCCTTGCACTGGAGAAGCAGCTGTGAAAGTAGACAGAGTTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR CCA 90 bp ATCTACAAAATGGCAATAAGATGGAGAGCTGAGGTGACATGCAGCTaGGGTGGCTGCGCCACCCTGGGAAAGCCCCGAGTCTGCTGCTGC +
Preference number: 1 (lower is better)
Translates to: IYKMAIRWRAEVTCS*GGCATLGKPRVCCC
Trigger: GCAGCAGCAGACTCGGGGCTTTCCCAGGGTGGCGCAGCCACCCCAGCTGCATGTCACCTCAGCTCTCCATCTTATTGCCATTTTGTAGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR CCA 90 bp GTGGATGTTTGTGCGTTGGAGACACTGACTGTTCTGAGTGACAAGTaGCTCTGTGCCAGGATACTGCGGGTCGGGCTCCTGGGTACAGCA +
Preference number: 1 (lower is better)
Translates to: VDVCALETLTVLSDK*LCARILRVGLLGTA
Trigger: TGCTGTACCCAGGAGCCCGACCCGCAGTATCCTGGCACAGAGCCACTTGTCACTCAGAACAGTCAGTGTCTCCAACGCACAAACATCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR TCA 90 bp TGGTCTCAGCTTCCTCATCTACAAAATGGCAATAAGATGGAGAGCTaGGGTGACATGCAGCTGGGGTGGCTGCGCCACCCTGGGAAAGCC +
Preference number: 1 (lower is better)
Translates to: WSQLPHLQNGNKMES*GDMQLGWLRHPGKA
Trigger: GGCTTTCCCAGGGTGGCGCAGCCACCCCAGCTGCATGTCACCTCAGCTCTCCATCTTATTGCCATTTTGTAGATGAGGAAGCTGAGACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR CCA 90 bp CCATCAGCAAAGAGGATCCTTTCCTTTGGAAGGACCTCGCCTGGTTaGGAGATGACAGTCTCTAGGATGAAGCCTGGAAGTCGGAGCCGA +
Preference number: 1 (lower is better)
Translates to: PSAKRILSFGRTSPG*EMTVSRMKPGSRSR
Trigger: TCGGCTCCGACTTCCAGGCTTCATCCTAGAGACTGTCATCTCCCAACCAGGCGAGGTCCTTCCAAAGGAAAGGATCCTCTTTGCTGATGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR CCA 90 bp GCCCTTCCCAGGAGCACACTACAGGGGCTCTTGGGACAGCCTCACTaGACTCAGGGTGGACAGGTAACGTACCTAAGAAACAAATCAACA +
Preference number: 1 (lower is better)
Translates to: ALPRSTLQGLLGQPH*TQGGQVTYLRNKST
Trigger: TGTTGATTTGTTTCTTAGGTACGTTACCTGTCCACCCTGAGTCCAGTGAGGCTGTCCCAAGAGCCCCTGTAGTGTGCTCCTGGGAAGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR CCA 90 bp CACATTTTCCCAAGATTACATTACCAAAAACAGTTGTTATGTCATTaGAGGGCGTCCATTAATACTGCTCGGAGAAGCACGATCTTACAC +
Preference number: 1 (lower is better)
Translates to: HIFPRLHYQKQLLCH*RASINTARRSTILH
Trigger: GTGTAAGATCGTGCTTCTCCGAGCAGTATTAATGGACGCCCTCCAATGACATAACAACTGTTTTTGGTAATGTAATCTTGGGAAAATGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR GCA 90 bp AGGGCCGCCGCCTGGGCCGCCGCGGTTGGGGATGGTGATGGTGTGGCGCACGCGTGGCGCACGCGGAAGTaGACGGCCTCCATGACCCGC +
Preference number: 2 (lower is better)
Translates to: RAAAWAAAVGDGDGVAHAWRTRK*TASMTR
Trigger: GCGGGTCATGGAGGCCGTGCACTTCCGCGTGCGCCA...CGCGTGCGCCACACCATCACCATCCCCAACCGCGGCGGCCCAGGCGGCGGCCCT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
3UTR-3UTR TCA 90 bp TCGGGCAGGTCGAAGCCGAAGTCCGCCCACTCGTCAGGGCCGCCGCCTGGGCCGCGCGGTTGGGGATGGTaGTGGTGTGGCGCACGCGGA +
Preference number: 2 (lower is better)
Translates to: SGRSKPKSAHSSGPPPGPRGWGW*WCGARG
Trigger: TCCGCGTGCGCCACACCATCACCATCCCCAACCGCG...CGGCCCAGGCGGCGGCCCTGACGAGTGGGCGGACTTCGGCTTCGACCTGCCCGA
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
3UTR-3UTR GCA 90 bp CTGGAAGTCGGAGCCGACGCTGCGGTCCCCACCCACGCCTGCCATGGAGCACGCGTCCCCACCCACGCCTaGCATGGAGCACGCCGGGGC +
Preference number: 2 (lower is better)
Translates to: LEVGADAAVPTHACHGARVPTHA*HGARRG
Trigger: GCCCCGGCGTGCTCCATGGCAGGCGTGGGTGGGGAC...GCGTGCTCCATGGCAGGCGTGGGTGGGGACCGCAGCGTCGGCTCCGACTTCCAG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR GCA 90 bp TCGGGCAGGTCGAAGCCGAAGTCCGCCCACTCGTCAGGGCCGCCGCCTGGGCCGTGGCGCACGCGGAAGTaGACGGCCTCCATGACCCGC +
Preference number: 2 (lower is better)
Translates to: SGRSKPKSAHSSGPPPGPWRTRK*TASMTR
Trigger: GCGGGTCATGGAGGCCGTGCACTTCCGCGTGCGCCA...CGGCCCAGGCGGCGGCCCTGACGAGTGGGCGGACTTCGGCTTCGACCTGCCCGA
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
3UTR-3UTR CCA 90 bp AGGGCCGCCGCCTGGGCCGCCGCGGTTGGGGATGGTGATGGTGTGGCGCACGCGGCCTCCATGACCCGCTaGCGCTGCAGTTCCCCTGAG +
Preference number: 2 (lower is better)
Translates to: RAAAWAAAVGDGDGVAHAASMTR*RCSSPE
Trigger: CTCAGGGGAACTGCAGCGCCAGCGGGTCATGGAGGC...CGCGTGCGCCACACCATCACCATCCCCAACCGCGGCGGCCCAGGCGGCGGCCCT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
3UTR-3UTR GCA 90 bp CAAGCGTGCACCCAGGCGACTGTGCTGTCAGCGGCCCCCGGGGAGGTGGACGGTAGTCGGAGCCGACGCTaGGGTCCCCACCCACGCCTG +
Preference number: 2 (lower is better)
Translates to: QACTQATVLSAAPGEVDGSRSRR*GPHPRL
Trigger: CAGGCGTGGGTGGGGACCGCAGCGTCGGCTCCGACT...ACCGTCCACCTCCCCGGGGGCCGCTGACAGCACAGTCGCCTGGGTGCACGCTTG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR CCA 90 bp TGCGCTGGGCTGAGGAACCCCGGGTGTCAGGATGGGCCCCCGCGGCTCCTGAAGTGGGTCTCTGGGCGGTaGCGCAGGCTGCAGCCAGGC +
Preference number: 2 (lower is better)
Translates to: CAGLRNPGCQDGPPRLLKWVSGR*RRLQPG
Trigger: GCCTGGCTGCAGCCTGCGCCACCGCCCAGAGACCCA...CTTCAGGAGCCGCGGGGGCCCATCCTGACACCCGGGGTTCCTCAGCCCAGCGCA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR CCA 90 bp CCTTGCAGTCGGGCAGGTCGAAGCCGAAGTCCGCCCACTCGTCAGGGCCGCCGCTGGGTCTCTGGGCGGTaGCGCAGGCTGCAGCCAGGC +
Preference number: 2 (lower is better)
Translates to: PCSRAGRSRSPPTRQGRRWVSGR*RRLQPG
Trigger: GCCTGGCTGCAGCCTGCGCCACCGCCCAGAGACCCA...GCGGCGGCCCTGACGAGTGGGCGGACTTCGGCTTCGACCTGCCCGACTGCAAGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
3UTR-3UTR TCA 90 bp TGGGCGGTGGCGCAGGCTGCAGCCAGGCGAGGCCCTCAGTGGATCTCGGCCTCCGCGCTGCAGTTCCCCTaGGCCGCCGATGGAGATGGT +
Preference number: 2 (lower is better)
Translates to: WAVAQAAARRGPQWISASALQFP*AADGDG
Trigger: ACCATCTCCATCGGCGGCTCAGGGGAACTGCAGCGC...GGAGGCCGAGATCCACTGAGGGCCTCGCCTGGCTGCAGCCTGCGCCACCGCCCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
3UTR-3UTR GCA 90 bp TGCGCTGGGCTGAGGAACCCCGGGTGTCAGGATGGGCCCCCGCGGCTCCTGAAGGGATGGGCCGGACCTTaGCTTTCCCCGGGCACAGCC +
Preference number: 2 (lower is better)
Translates to: CAGLRNPGCQDGPPRLLKGWAGP*LSPGTA
Trigger: GGCTGTGCCCGGGGAAAGGCAAGGTCCGGCCCATCC...CTTCAGGAGCCGCGGGGGCCCATCCTGACACCCGGGGTTCCTCAGCCCAGCGCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR GCA 90 bp CAAGCGTGCACCCAGGCGACTGTGCTGTCAGCGGCCCCCGGGGAGGTGGACGGTGGGGCTCCGGTTCCCTaGCCTGAAGCTGTGCTCCGG +
Preference number: 2 (lower is better)
Translates to: QACTQATVLSAAPGEVDGGAPVP*PEAVLR
Trigger: CCGGAGCACAGCTTCAGGGCAGGGAACCGGAGCCCC...ACCGTCCACCTCCCCGGGGGCCGCTGACAGCACAGTCGCCTGGGTGCACGCTTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR GCA 90 bp GGCGGTGGCGCAGGCTGCAGCCAGGCGAGGCCCTCAGTGGATCTCGGCCTCCGTCCCTGCTTCAGGTCCTaGAGGCCCCGCCAGATGGTC +
Preference number: 2 (lower is better)
Translates to: GGGAGCSQARPSVDLGLRPCFRS*RPRQMV
Trigger: GACCATCTGGCGGGGCCTGCAGGACCTGAAGCAGGG...ACGGAGGCCGAGATCCACTGAGGGCCTCGCCTGGCTGCAGCCTGCGCCACCGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
3UTR-3UTR GCA 90 bp GCGGTGGCGCAGGCTGCAGCCAGGCGAGGCCCTCAGTGGATCTCGGCCTCCGTGGCAGCTGCTGCGCGGTaGTGTAGTCGTGGCCCTGCT +
Preference number: 2 (lower is better)
Translates to: AVAQAAARRGPQWISASVAAAAR*CSRGPA
Trigger: AGCAGGGCCACGACTACAGCACCGCGCAGCAGCTGC...CACGGAGGCCGAGATCCACTGAGGGCCTCGCCTGGCTGCAGCCTGCGCCACCGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
3UTR-3UTR GCA 90 bp GCCTGGGCCGCCGCGGTTGGGGATGGTGATGGTGTGGCGCACGCGGAAGTGCACATGACCCGCTGGCGCTaGAGTTCCCCTGAGCCGCCG +
Preference number: 2 (lower is better)
Translates to: AWAAAVGDGDGVAHAEVHMTRWR*SSPEPP
Trigger: CGGCGGCTCAGGGGAACTGCAGCGCCAGCGGGTCAT...GTGCACTTCCGCGTGCGCCACACCATCACCATCCCCAACCGCGGCGGCCCAGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
3UTR-3UTR CCA 90 bp CAAGCGTGCACCCAGGCGACTGTGCTGTCAGCGGCCCCCGGGGAGGTGGACGGTCACAGGCGGCTTCGGTaGCTGGGCCTTTCCTGGGGC +
Preference number: 2 (lower is better)
Translates to: QACTQATVLSAAPGEVDGHRRLR*LGLSWG
Trigger: GCCCCAGGAAAGGCCCAGCCACCGAAGCCGCCTGTG...ACCGTCCACCTCCCCGGGGGCCGCTGACAGCACAGTCGCCTGGGTGCACGCTTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR CCA 90 bp TGCGCTGGGCTGAGGAACCCCGGGTGTCAGGATGGGCCCCCGCGGCTCCTGAAGCAGGGGGTGTGGAGCTaGCCGTGCCAGAAGGGGCCA +
Preference number: 2 (lower is better)
Translates to: CAGLRNPGCQDGPPRLLKQGVWS*PCQKGP
Trigger: TGGCCCCTTCTGGCACGGCCAGCTCCACACCCCCTG...CTTCAGGAGCCGCGGGGGCCCATCCTGACACCCGGGGTTCCTCAGCCCAGCGCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR TCA 90 bp GGCTGCTTGCGGGCCTTGCAGTCGGGCAGGTCGAAGCCGAAGTCCGCCCACTCGCGCGGTTGGGGATGGTaGTGGTGTGGCGCACGCGGA +
Preference number: 2 (lower is better)
Translates to: GCLRALQSGRSKPKSAHSRGWGW*WCGARG
Trigger: TCCGCGTGCGCCACACCATCACCATCCCCAACCGCG...CGAGTGGGCGGACTTCGGCTTCGACCTGCCCGACTGCAAGGCCCGCAAGCAGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
3UTR-3UTR GCA 90 bp CCCATTGGCCCACCTGCCTGCAATGAAGGGCCTCGTCACACCCGTGAGGCCCCCAGTCGGAGCCGACGCTaGGGTCCCCACCCACGCCTG +
Preference number: 2 (lower is better)
Translates to: PIGPPACNEGPRHTREAPSRSRR*GPHPRL
Trigger: CAGGCGTGGGTGGGGACCGCAGCGTCGGCTCCGACT...GGGGGCCTCACGGGTGTGACGAGGCCCTTCATTGCAGGCAGGTGGGCCAATGGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR GCA 90 bp CAAGCGTGCACCCAGGCGACTGTGCTGTCAGCGGCCCCCGGGGAGGTGGACGGTAGGGGCCAGGCAGCCTaGACTCTGGGTGGTGTCTCG +
Preference number: 2 (lower is better)
Translates to: QACTQATVLSAAPGEVDGRGQAA*TLGGVS
Trigger: CGAGACACCACCCAGAGTGCAGGCTGCCTGGCCCCT...ACCGTCCACCTCCCCGGGGGCCGCTGACAGCACAGTCGCCTGGGTGCACGCTTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR GCA 90 bp GCCTGGGCCGCCGCGGTTGGGGATGGTGATGGTGTGGCGCACGCGGAAGTGCACGCAGCTGCTGCGCGGTaGTGTAGTCGTGGCCCTGCT +
Preference number: 2 (lower is better)
Translates to: AWAAAVGDGDGVAHAEVHAAAAR*CSRGPA
Trigger: AGCAGGGCCACGACTACAGCACCGCGCAGCAGCTGC...GTGCACTTCCGCGTGCGCCACACCATCACCATCCCCAACCGCGGCGGCCCAGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
3UTR-3UTR CCA 90 bp GGGATGGGCCGGACCTTGCCTTTCCCCGGGCACAGCCCGAAGGTCCTGCCTCCTGGCAGCTTGGGTCTCTaGGCGGTGGCGCAGGCTGCA +
Preference number: 2 (lower is better)
Translates to: GMGRTLPFPGHSPKVLPPGSLGL*AVAQAA
Trigger: TGCAGCCTGCGCCACCGCCCAGAGACCCAAGCTGCC...AGGAGGCAGGACCTTCGGGCTGTGCCCGGGGAAAGGCAAGGTCCGGCCCATCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000346387.8
ENST00000354437.8
ENST00000357733.7
ENST00000378280.5
ENST00000378285.5
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR CCA 90 bp GGCCACCAAGGCTCAGGCTGCTCCTCGTGGATGGAGGTGGCCCCAGAAAGGGCCCACCCACGCCTGCCATaGAGCACGCCGGGGCAGTGG +
Preference number: 2 (lower is better)
Translates to: GHQGSGCSSWMEVAPERAHPRLP*STPGQW
Trigger: CCACTGCCCCGGCGTGCTCCATGGCAGGCGTGGGTG...GGCCCTTTCTGGGGCCACCTCCATCCACGAGGAGCAGCCTGAGCCTTGGTGGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR CCA 90 bp GTGGCGCACGCGGAAGTGCACGGCCTCCATGACCCGCTGGCGCTGCAGTTCCCCGCAGGCCCCGCCAGATaGTCATGCGGTACTGCTCGG +
Preference number: 2 (lower is better)
Translates to: VAHAEVHGLHDPLALQFPAGPAR*SCGTAR
Trigger: CCGAGCAGTACCGCATGACCATCTGGCGGGGCCTGC...GGGGAACTGCAGCGCCAGCGGGTCATGGAGGCCGTGCACTTCCGCGTGCGCCAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
3UTR-3UTR CCA 90 bp CCTTGCAGTCGGGCAGGTCGAAGCCGAAGTCCGCCCACTCGTCAGGGCCGCCGCGCAGGCCCCGCCAGATaGTCATGCGGTACTGCTCGG +
Preference number: 2 (lower is better)
Translates to: PCSRAGRSRSPPTRQGRRAGPAR*SCGTAR
Trigger: CCGAGCAGTACCGCATGACCATCTGGCGGGGCCTGC...GCGGCGGCCCTGACGAGTGGGCGGACTTCGGCTTCGACCTGCCCGACTGCAAGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
3UTR-3UTR TCA 90 bp TCGGGTAGCAGGTGCCCAGCCCCCAAGAGATGGGTGTGGTGCCTGGGGCATGGGCTCGGCTTGCGTGGGTaGGGGCTCCCATTGGCCCAC +
Preference number: 2 (lower is better)
Translates to: SGSRCPAPKRWVWCLGHGLGLRG*GLPLAH
Trigger: GTGGGCCAATGGGAGCCCTCACCCACGCAAGCCGAG...CCCATGCCCCAGGCACCACACCCATCTCTTGGGGGCTGGGCACCTGCTACCCGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR TCA 90 bp TCGGGTAGCAGGTGCCCAGCCCCCAAGAGATGGGTGTGGTGCCTGGGGCATGGGGCTGCCGCTACTGACTaGTGCCCTGGGCGTGGGCAC +
Preference number: 2 (lower is better)
Translates to: SGSRCPAPKRWVWCLGHGAAATD*CPGRGH
Trigger: GTGCCCACGCCCAGGGCATCAGTCAGTAGCGGCAGC...CCCATGCCCCAGGCACCACACCCATCTCTTGGGGGCTGGGCACCTGCTACCCGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR TCA 90 bp CTTGGGTCTCTGGGCGGTGGCGCAGGCTGCAGCCAGGCGAGGCCCTCAGTGGATAGTGCACGGCCTCCATaGCCCGCTGGCGCTGCAGTT +
Preference number: 2 (lower is better)
Translates to: LGSLGGGAGCSQARPSVDSARPP*PAGAAV
Trigger: AACTGCAGCGCCAGCGGGTCATGGAGGCCGTGCACT...ATCCACTGAGGGCCTCGCCTGGCTGCAGCCTGCGCCACCGCCCAGAGACCCAAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
3UTR-3UTR GCA 90 bp GTGCTCCGGGACGGTCAAGGTTCGGCCACCAAGGCTCAGGCTGCTCCTCGTGGAAGTCGGAGCCGACGCTaGGGTCCCCACCCACGCCTG +
Preference number: 2 (lower is better)
Translates to: VLRDGQGSATKAQAAPRGSRSRR*GPHPRL
Trigger: CAGGCGTGGGTGGGGACCGCAGCGTCGGCTCCGACT...TCCACGAGGAGCAGCCTGAGCCTTGGTGGCCGAACCTTGACCGTCCCGGAGCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR GCA 90 bp TCGGGTAGCAGGTGCCCAGCCCCCAAGAGATGGGTGTGGTGCCTGGGGCATGGGGTGTGGAGCTGGCCGTaGCAGAAGGGGCCAGGCAGC +
Preference number: 2 (lower is better)
Translates to: SGSRCPAPKRWVWCLGHGVWSWP*QKGPGS
Trigger: GCTGCCTGGCCCCTTCTGGCACGGCCAGCTCCACAC...CCCATGCCCCAGGCACCACACCCATCTCTTGGGGGCTGGGCACCTGCTACCCGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR GCA 90 bp TCGGGTAGCAGGTGCCCAGCCCCCAAGAGATGGGTGTGGTGCCTGGGGCATGGGTGCAGCTGGGGTGGCTaGGCCACCCTGGGAAAGCCC +
Preference number: 2 (lower is better)
Translates to: SGSRCPAPKRWVWCLGHGCSWGG*ATLGKP
Trigger: GGGCTTTCCCAGGGTGGCGCAGCCACCCCAGCTGCA...CCCATGCCCCAGGCACCACACCCATCTCTTGGGGGCTGGGCACCTGCTACCCGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR GCA 90 bp CTTGGGTCTCTGGGCGGTGGCGCAGGCTGCAGCCAGGCGAGGCCCTCAGTGGATGCAGCTGCTGCGCGGTaGTGTAGTCGTGGCCCTGCT +
Preference number: 2 (lower is better)
Translates to: LGSLGGGAGCSQARPSVDAAAAR*CSRGPA
Trigger: AGCAGGGCCACGACTACAGCACCGCGCAGCAGCTGC...ATCCACTGAGGGCCTCGCCTGGCTGCAGCCTGCGCCACCGCCCAGAGACCCAAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
3UTR-3UTR GCA 90 bp GGGGATGGTGATGGTGTGGCGCACGCGGAAGTGCACGGCCTCCATGACCCGCTGATGACCCGCTGGCGCTaGAGTTCCCCTGAGCCGCCG +
Preference number: 2 (lower is better)
Translates to: GDGDGVAHAEVHGLHDPLMTRWR*SSPEPP
Trigger: CGGCGGCTCAGGGGAACTGCAGCGCCAGCGGGTCAT...CAGCGGGTCATGGAGGCCGTGCACTTCCGCGTGCGCCACACCATCACCATCCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
3UTR-3UTR CCA 90 bp CCTGCACTCTGGGTGGTGTCTCGGCTTGCGTGGGTGAGGGCTCCCATTGGCCCATGGGTCTCTGGGCGGTaGCGCAGGCTGCAGCCAGGC +
Preference number: 2 (lower is better)
Translates to: PALWVVSRLAWVRAPIGPWVSGR*RRLQPG
Trigger: GCCTGGCTGCAGCCTGCGCCACCGCCCAGAGACCCA...TGGGCCAATGGGAGCCCTCACCCACGCAAGCCGAGACACCACCCAGAGTGCAGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR CCA 90 bp GGCCACCAAGGCTCAGGCTGCTCCTCGTGGATGGAGGTGGCCCCAGAAAGGGCCGGCAGCTTGGGTCTCTaGGCGGTGGCGCAGGCTGCA +
Preference number: 2 (lower is better)
Translates to: GHQGSGCSSWMEVAPERAGSLGL*AVAQAA
Trigger: TGCAGCCTGCGCCACCGCCCAGAGACCCAAGCTGCC...GGCCCTTTCTGGGGCCACCTCCATCCACGAGGAGCAGCCTGAGCCTTGGTGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR CCA 90 bp GCTCCGGTTCCCTGCCCTGAAGCTGTGCTCCGGGACGGTCAAGGTTCGGCCACCGGCGGCTTCGGTGGCTaGGCCTTTCCTGGGGCCTGT +
Preference number: 2 (lower is better)
Translates to: APVPCPEAVLRDGQGSATGGFGG*AFPGAC
Trigger: ACAGGCCCCAGGAAAGGCCCAGCCACCGAAGCCGCC...GGTGGCCGAACCTTGACCGTCCCGGAGCACAGCTTCAGGGCAGGGAACCGGAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR CCA 90 bp GTGTCAGGATGGGCCCCCGCGGCTCCTGAAGTGGAACATGGGGGAAGAGTGGGGCACCCACGCCTGCCATaGAGCACGCCGGGGCAGTGG +
Preference number: 2 (lower is better)
Translates to: VSGWAPAAPEVEHGGRVGHPRLP*STPGQW
Trigger: CCACTGCCCCGGCGTGCTCCATGGCAGGCGTGGGTG...CCCCACTCTTCCCCCATGTTCCACTTCAGGAGCCGCGGGGGCCCATCCTGACAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR CCA 90 bp TGCGCTGGGCTGAGGAACCCCGGGTGTCAGGATGGGCCCCCGCGGCTCCTGAAGGCTGCTCCTCGTGGATaGAGGTGGCCCCAGAAAGGG +
Preference number: 2 (lower is better)
Translates to: CAGLRNPGCQDGPPRLLKAAPRG*RWPQKG
Trigger: CCCTTTCTGGGGCCACCTCCATCCACGAGGAGCAGC...CTTCAGGAGCCGCGGGGGCCCATCCTGACACCCGGGGTTCCTCAGCCCAGCGCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR CCA 90 bp CCGCCGATGGAGATGGTGGCCGCGTTGCTAGAGCGGAGCAGCTGCTGCGCGGTGGCAGGCCCCGCCAGATaGTCATGCGGTACTGCTCGG +
Preference number: 2 (lower is better)
Translates to: PPMEMVAALLERSSCCAVAGPAR*SCGTAR
Trigger: CCGAGCAGTACCGCATGACCATCTGGCGGGGCCTGC...CACCGCGCAGCAGCTGCTCCGCTCTAGCAACGCGGCCACCATCTCCATCGGCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
3UTR-3UTR CCA 90 bp CTGCTTGCGGGCCTTGCAGTCGGGCAGGTCGAAGCCGAAGTCCGCCCACTCGTCCCCCTGAGCCGCCGATaGAGATGGTGGCCGCGTTGC +
Preference number: 2 (lower is better)
Translates to: LLAGLAVGQVEAEVRPLVPLSRR*RWWPRC
Trigger: GCAACGCGGCCACCATCTCCATCGGCGGCTCAGGGG...GACGAGTGGGCGGACTTCGGCTTCGACCTGCCCGACTGCAAGGCCCGCAAGCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
3UTR-3UTR CCA 90 bp TCGGGTAGCAGGTGCCCAGCCCCCAAGAGATGGGTGTGGTGCCTGGGGCATGGGCCCCTGAGCCGCCGATaGAGATGGTGGCCGCGTTGC +
Preference number: 2 (lower is better)
Translates to: SGSRCPAPKRWVWCLGHGPLSRR*RWWPRC
Trigger: GCAACGCGGCCACCATCTCCATCGGCGGCTCAGGGG...CCCATGCCCCAGGCACCACACCCATCTCTTGGGGGCTGGGCACCTGCTACCCGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000604074.5
3UTR-3UTR CCA 90 bp CTTGGGTCTCTGGGCGGTGGCGCAGGCTGCAGCCAGGCGAGGCCCTCAGTGGATGCCTCCATGACCCGCTaGCGCTGCAGTTCCCCTGAG +
Preference number: 2 (lower is better)
Translates to: LGSLGGGAGCSQARPSVDASMTR*RCSSPE
Trigger: CTCAGGGGAACTGCAGCGCCAGCGGGTCATGGAGGC...ATCCACTGAGGGCCTCGCCTGGCTGCAGCCTGCGCCACCGCCCAGAGACCCAAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
3UTR-3UTR TCA 90 bp TCGGGCAGGTCGAAGCCGAAGTCCGCCCACTCGTCAGGGCCGCCGCCTGGGCCGGAAGGTCCTGCCTCCTaGGGCAGTTTTGGACACACA +
Preference number: 2 (lower is better)
Translates to: SGRSKPKSAHSSGPPPGPEGPAS*GSFGHT
Trigger: TGTGTGTCCAAAACTGCCTCAGGAGGCAGGACCTTC...CGGCCCAGGCGGCGGCCCTGACGAGTGGGCGGACTTCGGCTTCGACCTGCCCGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
3UTR-3UTR GCA 90 bp GGGTGTCAGGATGGGCCCCCGCGGCTCCTGAAGTGGAACATGGGGGAAGAGTGGGGATGGGCCGGACCTTaGCTTTCCCCGGGCACAGCC +
Preference number: 2 (lower is better)
Translates to: GCQDGPPRLLKWNMGEEWGWAGP*LSPGTA
Trigger: GGCTGTGCCCGGGGAAAGGCAAGGTCCGGCCCATCC...CCACTCTTCCCCCATGTTCCACTTCAGGAGCCGCGGGGGCCCATCCTGACACCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR GCA 90 bp ACCTTGCCTTTCCCCGGGCACAGCCCGAAGGTCCTGCCTCCTGAGGCAGTTTTGGTCCCCACCCACGCCTaGCATGGAGCACGCCGGGGC +
Preference number: 2 (lower is better)
Translates to: TLPFPGHSPKVLPPEAVLVPTHA*HGARRG
Trigger: GCCCCGGCGTGCTCCATGGCAGGCGTGGGTGGGGAC...CAAAACTGCCTCAGGAGGCAGGACCTTCGGGCTGTGCCCGGGGAAAGGCAAGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR GCA 90 bp GGCCTGGTGGGAACGCTGGGGGAATGGGGGAGAGTCGCTGTTTCTGACCAGAGCAGTCGGAGCCGACGCTaGGGTCCCCACCCACGCCTG +
Preference number: 2 (lower is better)
Translates to: GLVGTLGEWGRVAVSDQSSRSRR*GPHPRL
Trigger: CAGGCGTGGGTGGGGACCGCAGCGTCGGCTCCGACT...GCTCTGGTCAGAAACAGCGACTCTCCCCCATTCCCCCAGCGTTCCCACCAGGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR GCA 90 bp CAAGCGTGCACCCAGGCGACTGTGCTGTCAGCGGCCCCCGGGGAGGTGGACGGTCACCAAGGCTCAGGCTaGTCCTCGTGGATGGAGGTG +
Preference number: 2 (lower is better)
Translates to: QACTQATVLSAAPGEVDGHQGSG*SSWMEV
Trigger: CACCTCCATCCACGAGGAGCAGCCTGAGCCTTGGTG...ACCGTCCACCTCCCCGGGGGCCGCTGACAGCACAGTCGCCTGGGTGCACGCTTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR GCA 90 bp CTTCAGGAGGTGGCCTCGGGTAGCAGGTGCCCAGCCCCCAAGAGATGGGTGTGGGGGGCTCCGGTTCCCTaGCCTGAAGCTGTGCTCCGG +
Preference number: 2 (lower is better)
Translates to: LQEVASGSRCPAPKRWVWGAPVP*PEAVLR
Trigger: CCGGAGCACAGCTTCAGGGCAGGGAACCGGAGCCCC...CCACACCCATCTCTTGGGGGCTGGGCACCTGCTACCCGAGGCCACCTCCTGAAG
68% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR CCA 90 bp CTTCAGGAGGTGGCCTCGGGTAGCAGGTGCCCAGCCCCCAAGAGATGGGTGTGGGGCAGCTTGGGTCTCTaGGCGGTGGCGCAGGCTGCA +
Preference number: 2 (lower is better)
Translates to: LQEVASGSRCPAPKRWVWGSLGL*AVAQAA
Trigger: TGCAGCCTGCGCCACCGCCCAGAGACCCAAGCTGCC...CCACACCCATCTCTTGGGGGCTGGGCACCTGCTACCCGAGGCCACCTCCTGAAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR CCA 90 bp AGTTCCCCTGAGCCGCCGATGGAGATGGTGGCCGCGTTGCTAGAGCGGAGCAGCGGCAGCTTGGGTCTCTaGGCGGTGGCGCAGGCTGCA +
Preference number: 2 (lower is better)
Translates to: SSPEPPMEMVAALLERSSGSLGL*AVAQAA
Trigger: TGCAGCCTGCGCCACCGCCCAGAGACCCAAGCTGCC...GCTGCTCCGCTCTAGCAACGCGGCCACCATCTCCATCGGCGGCTCAGGGGAACT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
3UTR-3UTR CCA 90 bp GGGCAGGAAGGAGGCGGTCCTGCAGAATACAGCGTGCTGGGGGCAGAGGCCAGTCACAGGCGGCTTCGGTaGCTGGGCCTTTCCTGGGGC +
Preference number: 2 (lower is better)
Translates to: GQEGGGPAEYSVLGAEASHRRLR*LGLSWG
Trigger: GCCCCAGGAAAGGCCCAGCCACCGAAGCCGCCTGTG...ACTGGCCTCTGCCCCCAGCACGCTGTATTCTGCAGGACCGCCTCCTTCCTGCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR CCA 90 bp GTGTCAGGATGGGCCCCCGCGGCTCCTGAAGTGGAACATGGGGGAAGAGTGGGGCACAGGCGGCTTCGGTaGCTGGGCCTTTCCTGGGGC +
Preference number: 2 (lower is better)
Translates to: VSGWAPAAPEVEHGGRVGHRRLR*LGLSWG
Trigger: GCCCCAGGAAAGGCCCAGCCACCGAAGCCGCCTGTG...CCCCACTCTTCCCCCATGTTCCACTTCAGGAGCCGCGGGGGCCCATCCTGACAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR CCA 90 bp CCTGCACTCTGGGTGGTGTCTCGGCTTGCGTGGGTGAGGGCTCCCATTGGCCCACCCACCCGGCCTTCCTaGGAACAAGTCCCGCCCACC +
Preference number: 2 (lower is better)
Translates to: PALWVVSRLAWVRAPIGPPTRPS*EQVPPT
Trigger: GGTGGGCGGGACTTGTTCCCAGGAAGGCCGGGTGGG...TGGGCCAATGGGAGCCCTCACCCACGCAAGCCGAGACACCACCCAGAGTGCAGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR CCA 90 bp GGGTGTCAGGATGGGCCCCCGCGGCTCCTGAAGTGGAACATGGGGGAAGAGTGGCCCACCCGGCCTTCCTaGGAACAAGTCCCGCCCACC +
Preference number: 2 (lower is better)
Translates to: GCQDGPPRLLKWNMGEEWPTRPS*EQVPPT
Trigger: GGTGGGCGGGACTTGTTCCCAGGAAGGCCGGGTGGG...CCACTCTTCCCCCATGTTCCACTTCAGGAGCCGCGGGGGCCCATCCTGACACCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR CCA 90 bp CTGCTTGCGGGCCTTGCAGTCGGGCAGGTCGAAGCCGAAGTCCGCCCACTCGTCGCCTCCATGACCCGCTaGCGCTGCAGTTCCCCTGAG +
Preference number: 2 (lower is better)
Translates to: LLAGLAVGQVEAEVRPLVASMTR*RCSSPE
Trigger: CTCAGGGGAACTGCAGCGCCAGCGGGTCATGGAGGC...GACGAGTGGGCGGACTTCGGCTTCGACCTGCCCGACTGCAAGGCCCGCAAGCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
3UTR-3UTR TCA 90 bp CAGCTGGGGCCATCTGGCTGCTCCGTGTTCTGGCCGGCTTCCTTGGACATCTGGGCTGCCGCTACTGACTaGTGCCCTGGGCGTGGGCAC +
Preference number: 2 (lower is better)
Translates to: QLGPSGCSVFWPASLDIWAAATD*CPGRGH
Trigger: GTGCCCACGCCCAGGGCATCAGTCAGTAGCGGCAGC...CCAGATGTCCAAGGAAGCCGGCCAGAACACGGAGCAGCCAGATGGCCCCAGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR GCA 90 bp CAGCTGGGGCCATCTGGCTGCTCCGTGTTCTGGCCGGCTTCCTTGGACATCTGGGGATGGGCCGGACCTTaGCTTTCCCCGGGCACAGCC +
Preference number: 2 (lower is better)
Translates to: QLGPSGCSVFWPASLDIWGWAGP*LSPGTA
Trigger: GGCTGTGCCCGGGGAAAGGCAAGGTCCGGCCCATCC...CCAGATGTCCAAGGAAGCCGGCCAGAACACGGAGCAGCCAGATGGCCCCAGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR GCA 90 bp GCTCCGGTTCCCTGCCCTGAAGCTGTGCTCCGGGACGGTCAAGGTTCGGCCACCCCCAGAAAGGGCCTGTaGAGACTCTGTCTCCCCGGG +
Preference number: 2 (lower is better)
Translates to: APVPCPEAVLRDGQGSATPRKGL*RLCLPG
Trigger: CCCGGGGAGACAGAGTCTGCACAGGCCCTTTCTGGG...GGTGGCCGAACCTTGACCGTCCCGGAGCACAGCTTCAGGGCAGGGAACCGGAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR GCA 90 bp CAAGCGTGCACCCAGGCGACTGTGCTGTCAGCGGCCCCCGGGGAGGTGGACGGTATTGGCCCACCTGCCTaGAATGAAGGGCCTCGTCAC +
Preference number: 2 (lower is better)
Translates to: QACTQATVLSAAPGEVDGIGPPA*NEGPRH
Trigger: GTGACGAGGCCCTTCATTGCAGGCAGGTGGGCCAAT...ACCGTCCACCTCCCCGGGGGCCGCTGACAGCACAGTCGCCTGGGTGCACGCTTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR GCA 90 bp GGCCTGGTGGGAACGCTGGGGGAATGGGGGAGAGTCGCTGTTTCTGACCAGAGCCAGCCCCGTTCCTGCTaGCCCCACAAGCGTGCACCC +
Preference number: 2 (lower is better)
Translates to: GLVGTLGEWGRVAVSDQSQPRSC*PHKRAP
Trigger: GGGTGCACGCTTGTGGGGGCAGCAGGAACGGGGCTG...GCTCTGGTCAGAAACAGCGACTCTCCCCCATTCCCCCAGCGTTCCCACCAGGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR GCA 90 bp GATGGTGTGGCGCACGCGGAAGTGCACGGCCTCCATGACCCGCTGGCGCTGCAGCCCGCCAGATGGTCATaGGGTACTGCTCGGGGATCT +
Preference number: 2 (lower is better)
Translates to: DGVAHAEVHGLHDPLALQPARWS*GTARGS
Trigger: AGATCCCCGAGCAGTACCGCATGACCATCTGGCGGG...CTGCAGCGCCAGCGGGTCATGGAGGCCGTGCACTTCCGCGTGCGCCACACCATC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
3UTR-3UTR GCA 90 bp GGGCAGGAAGGAGGCGGTCCTGCAGAATACAGCGTGCTGGGGGCAGAGGCCAGTCCCTGCTTCAGGTCCTaGAGGCCCCGCCAGATGGTC +
Preference number: 2 (lower is better)
Translates to: GQEGGGPAEYSVLGAEASPCFRS*RPRQMV
Trigger: GACCATCTGGCGGGGCCTGCAGGACCTGAAGCAGGG...ACTGGCCTCTGCCCCCAGCACGCTGTATTCTGCAGGACCGCCTCCTTCCTGCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000604074.5
3UTR-3UTR CCA 90 bp AGGCCCTCAGTGGATCTCGGCCTCCGTGAACTCCTCCTTGATGGGCTGCTTGCGTGGGTCTCTGGGCGGTaGCGCAGGCTGCAGCCAGGC +
Preference number: 2 (lower is better)
Translates to: RPSVDLGLRELLLDGLLAWVSGR*RRLQPG
Trigger: GCCTGGCTGCAGCCTGCGCCACCGCCCAGAGACCCA...CGCAAGCAGCCCATCAAGGAGGAGTTCACGGAGGCCGAGATCCACTGAGGGCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
3UTR-3UTR CCA 90 bp GCCAGAGCTTCCTGCCCTTCAGCTGGAAGGAGCCGGAAGGAGCTGGAAGGAAGGTGGGTCTCTGGGCGGTaGCGCAGGCTGCAGCCAGGC +
Preference number: 2 (lower is better)
Translates to: ARASCPSAGRSRKELEGRWVSGR*RRLQPG
Trigger: GCCTGGCTGCAGCCTGCGCCACCGCCCAGAGACCCA...CCTTCCTTCCAGCTCCTTCCGGCTCCTTCCAGCTGAAGGGCAGGAAGCTCTGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR CCA 90 bp CAGCTGGGGCCATCTGGCTGCTCCGTGTTCTGGCCGGCTTCCTTGGACATCTGGGGCAGCTTGGGTCTCTaGGCGGTGGCGCAGGCTGCA +
Preference number: 2 (lower is better)
Translates to: QLGPSGCSVFWPASLDIWGSLGL*AVAQAA
Trigger: TGCAGCCTGCGCCACCGCCCAGAGACCCAAGCTGCC...CCAGATGTCCAAGGAAGCCGGCCAGAACACGGAGCAGCCAGATGGCCCCAGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR CCA 90 bp GGACCTTGCCTTTCCCCGGGCACAGCCCGAAGGTCCTGCCTCCTGAGGCAGTTTGGCGGCTTCGGTGGCTaGGCCTTTCCTGGGGCCTGT +
Preference number: 2 (lower is better)
Translates to: GPCLSPGTARRSCLLRQFGGFGG*AFPGAC
Trigger: ACAGGCCCCAGGAAAGGCCCAGCCACCGAAGCCGCC...AAACTGCCTCAGGAGGCAGGACCTTCGGGCTGTGCCCGGGGAAAGGCAAGGTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000346387.8
ENST00000354437.8
ENST00000357733.7
ENST00000378280.5
ENST00000378285.5
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR CCA 90 bp AGCCAGGCGAGGCCCTCAGTGGATCTCGGCCTCCGTGAACTCCTCCTTGATGGGCACAGGCGGCTTCGGTaGCTGGGCCTTTCCTGGGGC +
Preference number: 2 (lower is better)
Translates to: SQARPSVDLGLRELLLDGHRRLR*LGLSWG
Trigger: GCCCCAGGAAAGGCCCAGCCACCGAAGCCGCCTGTG...CCCATCAAGGAGGAGTTCACGGAGGCCGAGATCCACTGAGGGCCTCGCCTGGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
3UTR-3UTR CCA 90 bp TCGGGTAGCAGGTGCCCAGCCCCCAAGAGATGGGTGTGGTGCCTGGGGCATGGGAGGCAGCCTGCACTCTaGGTGGTGTCTCGGCTTGCG +
Preference number: 2 (lower is better)
Translates to: SGSRCPAPKRWVWCLGHGRQPAL*VVSRLA
Trigger: CGCAAGCCGAGACACCACCCAGAGTGCAGGCTGCCT...CCCATGCCCCAGGCACCACACCCATCTCTTGGGGGCTGGGCACCTGCTACCCGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR CCA 90 bp GGCCTGGTGGGAACGCTGGGGGAATGGGGGAGAGTCGCTGTTTCTGACCAGAGCCAGGGGGTGTGGAGCTaGCCGTGCCAGAAGGGGCCA +
Preference number: 2 (lower is better)
Translates to: GLVGTLGEWGRVAVSDQSQGVWS*PCQKGP
Trigger: TGGCCCCTTCTGGCACGGCCAGCTCCACACCCCCTG...GCTCTGGTCAGAAACAGCGACTCTCCCCCATTCCCCCAGCGTTCCCACCAGGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR CCA 90 bp GGGTGTCAGGATGGGCCCCCGCGGCTCCTGAAGTGGAACATGGGGGAAGAGTGGGTGGCTGCGCCACCCTaGGAAAGCCCCGAGTCTGCT +
Preference number: 2 (lower is better)
Translates to: GCQDGPPRLLKWNMGEEWVAAPP*ESPESA
Trigger: AGCAGACTCGGGGCTTTCCCAGGGTGGCGCAGCCAC...CCACTCTTCCCCCATGTTCCACTTCAGGAGCCGCGGGGGCCCATCCTGACACCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR CCA 90 bp GTGTCAGGATGGGCCCCCGCGGCTCCTGAAGTGGAACATGGGGGAAGAGTGGGGGCAGCTGGGGCCATCTaGCTGCTCCGTGTTCTGGCC +
Preference number: 2 (lower is better)
Translates to: VSGWAPAAPEVEHGGRVGAAGAI*LLRVLA
Trigger: GGCCAGAACACGGAGCAGCCAGATGGCCCCAGCTGC...CCCCACTCTTCCCCCATGTTCCACTTCAGGAGCCGCGGGGGCCCATCCTGACAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR CAA 90 bp CCTCAGTGGATCTCGGCCTCCGTGAACTCCTCCTTGATGGGCTGCTaGCGGGCCTTGCAGTCGGGCAGGTCGAAGCCGAAGTCCGCCCAC +
Preference number: 2 (lower is better)
Translates to: PQWISASVNSSLMGC*RALQSGRSKPKSAH
Trigger: GTGGGCGGACTTCGGCTTCGACCTGCCCGACTGCAAGGCCCGCAAGCAGCCCATCAAGGAGGAGTTCACGGAGGCCGAGATCCACTGAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
3UTR-3UTR TCA 90 bp GGCAGGAAGGAGGCGGTCCTGCAGAATACAGCGTGCTGGGGGCAGAGGCCAGTCCTGAGGGGCACTGGCTaGGGCGGTACCACATGCTTC +
Preference number: 2 (lower is better)
Translates to: GRKEAVLQNTACWGQRPVLRGTG*GGTTCF
Trigger: GAAGCATGTGGTACCGCCTCAGCCAGTGCCCCTCAG...GACTGGCCTCTGCCCCCAGCACGCTGTATTCTGCAGGACCGCCTCCTTCCTGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR TCA 90 bp GGCCTGGTGGGAACGCTGGGGGAATGGGGGAGAGTCGCTGTTTCTGACCAGAGCACATCTGCGCTGGGCTaGGGAACCCCGGGTGTCAGG +
Preference number: 2 (lower is better)
Translates to: GLVGTLGEWGRVAVSDQSTSALG*GTPGVR
Trigger: CCTGACACCCGGGGTTCCTCAGCCCAGCGCAGATGT...GCTCTGGTCAGAAACAGCGACTCTCCCCCATTCCCCCAGCGTTCCCACCAGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR TCA 90 bp AGCCAGGCGAGGCCCTCAGTGGATCTCGGCCTCCGTGAACTCCTCCTTGATGGGGCGCTGCAGTTCCCCTaGGCCGCCGATGGAGATGGT +
Preference number: 2 (lower is better)
Translates to: SQARPSVDLGLRELLLDGALQFP*AADGDG
Trigger: ACCATCTCCATCGGCGGCTCAGGGGAACTGCAGCGC...CCCATCAAGGAGGAGTTCACGGAGGCCGAGATCCACTGAGGGCCTCGCCTGGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
3UTR-3UTR GCA 90 bp ACGCGGAAGTGCACGGCCTCCATGACCCGCTGGCGCTGCAGTTCCCCTGAGCCGACAGCCCGAAGGTCCTaGCTCCTGAGGCAGTTTTGG +
Preference number: 2 (lower is better)
Translates to: TRKCTASMTRWRCSSPEPTARRS*LLRQFW
Trigger: CCAAAACTGCCTCAGGAGGCAGGACCTTCGGGCTGT...CGGCTCAGGGGAACTGCAGCGCCAGCGGGTCATGGAGGCCGTGCACTTCCGCGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
3UTR-3UTR GCA 90 bp GGACGGTGGGAGAGGGATGCCTGCGTCTTCGTAGACCAGGTACCTGCGGCAACAGGATGGGCCGGACCTTaGCTTTCCCCGGGCACAGCC +
Preference number: 2 (lower is better)
Translates to: GRWERDACVFVDQVPAATGWAGP*LSPGTA
Trigger: GGCTGTGCCCGGGGAAAGGCAAGGTCCGGCCCATCC...TGTTGCCGCAGGTACCTGGTCTACGAAGACGCAGGCATCCCTCTCCCACCGTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR GCA 90 bp AGCACACTACAGGGGCTCTTGGGACAGCCTCACTGGACTCAGGGTGGACAGGTAGTCCCCACCCACGCCTaGCATGGAGCACGCCGGGGC +
Preference number: 2 (lower is better)
Translates to: STLQGLLGQPHWTQGGQVVPTHA*HGARRG
Trigger: GCCCCGGCGTGCTCCATGGCAGGCGTGGGTGGGGAC...TACCTGTCCACCCTGAGTCCAGTGAGGCTGTCCCAAGAGCCCCTGTAGTGTGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR GCA 90 bp TCGGGTAGCAGGTGCCCAGCCCCCAAGAGATGGGTGTGGTGCCTGGGGCATGGGCTGCAGAATACAGCGTaGTGGGGGCAGAGGCCAGTC +
Preference number: 2 (lower is better)
Translates to: SGSRCPAPKRWVWCLGHGLQNTA*WGQRPV
Trigger: GACTGGCCTCTGCCCCCAGCACGCTGTATTCTGCAG...CCCATGCCCCAGGCACCACACCCATCTCTTGGGGGCTGGGCACCTGCTACCCGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR GCA 90 bp GGCCACCAAGGCTCAGGCTGCTCCTCGTGGATGGAGGTGGCCCCAGAAAGGGCCGGAAGGAGGCGGTCCTaGAGAATACAGCGTGCTGGG +
Preference number: 2 (lower is better)
Translates to: GHQGSGCSSWMEVAPERAGRRRS*RIQRAG
Trigger: CCCAGCACGCTGTATTCTGCAGGACCGCCTCCTTCC...GGCCCTTTCTGGGGCCACCTCCATCCACGAGGAGCAGCCTGAGCCTTGGTGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR GCA 90 bp GCCAGAGCTTCCTGCCCTTCAGCTGGAAGGAGCCGGAAGGAGCTGGAAGGAAGGGTGTGGAGCTGGCCGTaGCAGAAGGGGCCAGGCAGC +
Preference number: 2 (lower is better)
Translates to: ARASCPSAGRSRKELEGRVWSWP*QKGPGS
Trigger: GCTGCCTGGCCCCTTCTGGCACGGCCAGCTCCACAC...CCTTCCTTCCAGCTCCTTCCGGCTCCTTCCAGCTGAAGGGCAGGAAGCTCTGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR GCA 90 bp CACACTACAGGGGCTCTTGGGACAGCCTCACTGGACTCAGGGTGGACAGGTAACGCACCCAGGCGACTGTaGTGTCAGCGGCCCCCGGGG +
Preference number: 2 (lower is better)
Translates to: HTTGALGTASLDSGWTGNAPRRL*CQRPPG
Trigger: CCCCGGGGGCCGCTGACAGCACAGTCGCCTGGGTGC...GTTACCTGTCCACCCTGAGTCCAGTGAGGCTGTCCCAAGAGCCCCTGTAGTGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR GCA 90 bp GGCCTGGTGGGAACGCTGGGGGAATGGGGGAGAGTCGCTGTTTCTGACCAGAGCCTGCCCCCACAAGCGTaGACCCAGGCGACTGTGCTG +
Preference number: 2 (lower is better)
Translates to: GLVGTLGEWGRVAVSDQSLPPQA*TQATVL
Trigger: CAGCACAGTCGCCTGGGTGCACGCTTGTGGGGGCAG...GCTCTGGTCAGAAACAGCGACTCTCCCCCATTCCCCCAGCGTTCCCACCAGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR GCA 90 bp GGGTGTCAGGATGGGCCCCCGCGGCTCCTGAAGTGGAACATGGGGGAAGAGTGGGGCTCCCTAGACAGGTaGAGCTGGGGCCATCTGGCT +
Preference number: 2 (lower is better)
Translates to: GCQDGPPRLLKWNMGEEWGSLDR*SWGHLA
Trigger: AGCCAGATGGCCCCAGCTGCACCTGTCTAGGGAGCC...CCACTCTTCCCCCATGTTCCACTTCAGGAGCCGCGGGGGCCCATCCTGACACCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR GCA 90 bp CGCGGTGCTGTAGTCGTGGCCCTGCTTCAGGTCCTGCAGGCCCCGCCAGATGGTCCCGCCAGATGGTCATaGGGTACTGCTCGGGGATCT +
Preference number: 2 (lower is better)
Translates to: RGAVVVALLQVLQAPPDGPARWS*GTARGS
Trigger: AGATCCCCGAGCAGTACCGCATGACCATCTGGCGGG...ACCATCTGGCGGGGCCTGCAGGACCTGAAGCAGGGCCACGACTACAGCACCGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
3UTR-3UTR CCA 90 bp ACCTTGCCTTTCCCCGGGCACAGCCCGAAGGTCCTGCCTCCTGAGGCAGTTTTGGGCAGCTTGGGTCTCTaGGCGGTGGCGCAGGCTGCA +
Preference number: 2 (lower is better)
Translates to: TLPFPGHSPKVLPPEAVLGSLGL*AVAQAA
Trigger: TGCAGCCTGCGCCACCGCCCAGAGACCCAAGCTGCC...CAAAACTGCCTCAGGAGGCAGGACCTTCGGGCTGTGCCCGGGGAAAGGCAAGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000346387.8
ENST00000354437.8
ENST00000357733.7
ENST00000378280.5
ENST00000378285.5
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR CCA 90 bp CTGGAAGTCGGAGCCGACGCTGCGGTCCCCACCCACGCCTGCCATGGAGCACGCTGGAAGGACCTCGCCTaGTTGGGAGATGACAGTCTC +
Preference number: 2 (lower is better)
Translates to: LEVGADAAVPTHACHGARWKDLA*LGDDSL
Trigger: GAGACTGTCATCTCCCAACCAGGCGAGGTCCTTCCA...GCGTGCTCCATGGCAGGCGTGGGTGGGGACCGCAGCGTCGGCTCCGACTTCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR CCA 90 bp GTGTCAGGATGGGCCCCCGCGGCTCCTGAAGTGGAACATGGGGGAAGAGTGGGGCAGGCTGAGGGGCACTaGCTGAGGCGGTACCACATG +
Preference number: 2 (lower is better)
Translates to: VSGWAPAAPEVEHGGRVGQAEGH*LRRYHM
Trigger: CATGTGGTACCGCCTCAGCCAGTGCCCCTCAGCCTG...CCCCACTCTTCCCCCATGTTCCACTTCAGGAGCCGCGGGGGCCCATCCTGACAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR CCA 90 bp CCTGCACTCTGGGTGGTGTCTCGGCTTGCGTGGGTGAGGGCTCCCATTGGCCCACAGGCTGAGGGGCACTaGCTGAGGCGGTACCACATG +
Preference number: 2 (lower is better)
Translates to: PALWVVSRLAWVRAPIGPQAEGH*LRRYHM
Trigger: CATGTGGTACCGCCTCAGCCAGTGCCCCTCAGCCTG...TGGGCCAATGGGAGCCCTCACCCACGCAAGCCGAGACACCACCCAGAGTGCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR CCA 90 bp GAAGGTGGCCGTGGCAAGGGAGGAGCTGCTCCCATGGCAGAGCATTCCTGCAGACCCACCCGGCCTTCCTaGGAACAAGTCCCGCCCACC +
Preference number: 2 (lower is better)
Translates to: EGGRGKGGAAPMAEHSCRPTRPS*EQVPPT
Trigger: GGTGGGCGGGACTTGTTCCCAGGAAGGCCGGGTGGG...TCTGCAGGAATGCTCTGCCATGGGAGCAGCTCCTCCCTTGCCACGGCCACCTTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR CCA 90 bp CCCATTGGCCCACCTGCCTGCAATGAAGGGCCTCGTCACACCCGTGAGGCCCCCGGCCTACTAACTCCCTaGGGTGCTCCACGAAGGCCT +
Preference number: 2 (lower is better)
Translates to: PIGPPACNEGPRHTREAPGLLTP*GAPRRP
Trigger: AGGCCTTCGTGGAGCACCCCAGGGAGTTAGTAGGCC...GGGGGCCTCACGGGTGTGACGAGGCCCTTCATTGCAGGCAGGTGGGCCAATGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR CCA 90 bp GCTCCGGTTCCCTGCCCTGAAGCTGTGCTCCGGGACGGTCAAGGTTCGGCCACCGGCCTACTAACTCCCTaGGGTGCTCCACGAAGGCCT +
Preference number: 2 (lower is better)
Translates to: APVPCPEAVLRDGQGSATGLLTP*GAPRRP
Trigger: AGGCCTTCGTGGAGCACCCCAGGGAGTTAGTAGGCC...GGTGGCCGAACCTTGACCGTCCCGGAGCACAGCTTCAGGGCAGGGAACCGGAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR CCA 90 bp CAGCTGGGGCCATCTGGCTGCTCCGTGTTCTGGCCGGCTTCCTTGGACATCTGGCCTAGGCAGGGGGTGTaGAGCTGGCCGTGCCAGAAG +
Preference number: 2 (lower is better)
Translates to: QLGPSGCSVFWPASLDIWPRQGV*SWPCQK
Trigger: CTTCTGGCACGGCCAGCTCCACACCCCCTGCCTAGG...CCAGATGTCCAAGGAAGCCGGCCAGAACACGGAGCAGCCAGATGGCCCCAGCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR CCA 90 bp GGGTGTCAGGATGGGCCCCCGCGGCTCCTGAAGTGGAACATGGGGGAAGAGTGGGAAGCACATCTGCGCTaGGCTGAGGAACCCCGGGTG +
Preference number: 2 (lower is better)
Translates to: GCQDGPPRLLKWNMGEEWEAHLR*AEEPRV
Trigger: CACCCGGGGTTCCTCAGCCCAGCGCAGATGTGCTTC...CCACTCTTCCCCCATGTTCCACTTCAGGAGCCGCGGGGGCCCATCCTGACACCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR CCA 90 bp GTGTCAGGATGGGCCCCCGCGGCTCCTGAAGTGGAACATGGGGGAAGAGTGGGGCTAGACAGGTGCAGCTaGGGCCATCTGGCTGCTCCG +
Preference number: 2 (lower is better)
Translates to: VSGWAPAAPEVEHGGRVGLDRCS*GHLAAP
Trigger: CGGAGCAGCCAGATGGCCCCAGCTGCACCTGTCTAG...CCCCACTCTTCCCCCATGTTCCACTTCAGGAGCCGCGGGGGCCCATCCTGACAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR TCA 90 bp GGCTGCTTGCGGGCCTTGCAGTCGGGCAGGTCGAAGCCGAAGTCCGCCCACTCGGAAGGTCCTGCCTCCTaGGGCAGTTTTGGACACACA +
Preference number: 2 (lower is better)
Translates to: GCLRALQSGRSKPKSAHSEGPAS*GSFGHT
Trigger: TGTGTGTCCAAAACTGCCTCAGGAGGCAGGACCTTC...CGAGTGGGCGGACTTCGGCTTCGACCTGCCCGACTGCAAGGCCCGCAAGCAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
3UTR-3UTR TCA 90 bp GCTCCGGTTCCCTGCCCTGAAGCTGTGCTCCGGGACGGTCAAGGTTCGGCCACCCCTCAGTCTGTTCCCTaGCTGCCACCGCCTAGAAAG +
Preference number: 2 (lower is better)
Translates to: APVPCPEAVLRDGQGSATPQSVP*LPPPRK
Trigger: CTTTCTAGGCGGTGGCAGTCAGGGAACAGACTGAGG...GGTGGCCGAACCTTGACCGTCCCGGAGCACAGCTTCAGGGCAGGGAACCGGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR TCA 90 bp TCGGGTAGCAGGTGCCCAGCCCCCAAGAGATGGGTGTGGTGCCTGGGGCATGGGAGCAAGATGGAGTCCTaGTCTGGGGATGGGGGCTGT +
Preference number: 2 (lower is better)
Translates to: SGSRCPAPKRWVWCLGHGSKMES*SGDGGC
Trigger: ACAGCCCCCATCCCCAGATCAGGACTCCATCTTGCT...CCCATGCCCCAGGCACCACACCCATCTCTTGGGGGCTGGGCACCTGCTACCCGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR TCA 90 bp GTGTCAGGATGGGCCCCCGCGGCTCCTGAAGTGGAACATGGGGGAAGAGTGGGGGATGGAGAGCTGAGGTaGCATGCAGCTGGGGTGGCT +
Preference number: 2 (lower is better)
Translates to: VSGWAPAAPEVEHGGRVGDGELR*HAAGVA
Trigger: AGCCACCCCAGCTGCATGTCACCTCAGCTCTCCATC...CCCCACTCTTCCCCCATGTTCCACTTCAGGAGCCGCGGGGGCCCATCCTGACAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR TCA 90 bp GCCCTTCCCAGGAGCACACTACAGGGGCTCTTGGGACAGCCTCACTGGACTCAGACATCTGCGCTGGGCTaGGGAACCCCGGGTGTCAGG +
Preference number: 2 (lower is better)
Translates to: ALPRSTLQGLLGQPHWTQTSALG*GTPGVR
Trigger: CCTGACACCCGGGGTTCCTCAGCCCAGCGCAGATGT...CTGAGTCCAGTGAGGCTGTCCCAAGAGCCCCTGTAGTGTGCTCCTGGGAAGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR TCA 90 bp GGACGGTGGGAGAGGGATGCCTGCGTCTTCGTAGACCAGGTACCTGCGGCAACAAGTGCACGGCCTCCATaGCCCGCTGGCGCTGCAGTT +
Preference number: 2 (lower is better)
Translates to: GRWERDACVFVDQVPAATSARPP*PAGAAV
Trigger: AACTGCAGCGCCAGCGGGTCATGGAGGCCGTGCACT...TGTTGCCGCAGGTACCTGGTCTACGAAGACGCAGGCATCCCTCTCCCACCGTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604074.5
3UTR-3UTR GCA 90 bp GGCAGGAAGGAGGCGGTCCTGCAGAATACAGCGTGCTGGGGGCAGAGGCCAGTCGGAAGGAGGCGGTCCTaGAGAATACAGCGTGCTGGG +
Preference number: 2 (lower is better)
Translates to: GRKEAVLQNTACWGQRPVGRRRS*RIQRAG
Trigger: CCCAGCACGCTGTATTCTGCAGGACCGCCTCCTTCC...GACTGGCCTCTGCCCCCAGCACGCTGTATTCTGCAGGACCGCCTCCTTCCTGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR GCA 90 bp GGGTGTCAGGATGGGCCCCCGCGGCTCCTGAAGTGGAACATGGGGGAAGAGTGGCGTAGACCAGGTACCTaGGGCAACACCAGTCGCTGC +
Preference number: 2 (lower is better)
Translates to: GCQDGPPRLLKWNMGEEWRRPGT*GNTSRC
Trigger: GCAGCGACTGGTGTTGCCGCAGGTACCTGGTCTACG...CCACTCTTCCCCCATGTTCCACTTCAGGAGCCGCGGGGGCCCATCCTGACACCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR CCA 90 bp GTGGCGCACGCGGAAGTGCACGGCCTCCATGACCCGCTGGCGCTGCAGTTCCCCCTCCTGAGGCAGTTTTaGACACACAGGAAGGAGAGG +
Preference number: 2 (lower is better)
Translates to: VAHAEVHGLHDPLALQFPLLRQF*THRKER
Trigger: CCTCTCCTTCCTGTGTGTCCAAAACTGCCTCAGGAG...GGGGAACTGCAGCGCCAGCGGGTCATGGAGGCCGTGCACTTCCGCGTGCGCCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
3UTR-3UTR CCA 90 bp ATGGCAATAAGATGGAGAGCTGAGGTGACATGCAGCTGGGGTGGCTGCGCCACCCACCCACGCCTGCCATaGAGCACGCCGGGGCAGTGG +
Preference number: 2 (lower is better)
Translates to: MAIRWRAEVTCSWGGCATHPRLP*STPGQW
Trigger: CCACTGCCCCGGCGTGCTCCATGGCAGGCGTGGGTG...GGTGGCGCAGCCACCCCAGCTGCATGTCACCTCAGCTCTCCATCTTATTGCCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR CCA 90 bp CTTCAGGAGGTGGCCTCGGGTAGCAGGTGCCCAGCCCCCAAGAGATGGGTGTGGCAGAATACAGCGTGCTaGGGGCAGAGGCCAGTCCCA +
Preference number: 2 (lower is better)
Translates to: LQEVASGSRCPAPKRWVWQNTAC*GQRPVP
Trigger: TGGGACTGGCCTCTGCCCCCAGCACGCTGTATTCTG...CCACACCCATCTCTTGGGGGCTGGGCACCTGCTACCCGAGGCCACCTCCTGAAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR CCA 90 bp GGGTGTCAGGATGGGCCCCCGCGGCTCCTGAAGTGGAACATGGGGGAAGAGTGGCAGAATACAGCGTGCTaGGGGCAGAGGCCAGTCCCA +
Preference number: 2 (lower is better)
Translates to: GCQDGPPRLLKWNMGEEWQNTAC*GQRPVP
Trigger: TGGGACTGGCCTCTGCCCCCAGCACGCTGTATTCTG...CCACTCTTCCCCCATGTTCCACTTCAGGAGCCGCGGGGGCCCATCCTGACACCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR CCA 90 bp GTGTCAGGATGGGCCCCCGCGGCTCCTGAAGTGGAACATGGGGGAAGAGTGGGGCAGAATACAGCGTGCTaGGGGCAGAGGCCAGTCCCA +
Preference number: 2 (lower is better)
Translates to: VSGWAPAAPEVEHGGRVGQNTAC*GQRPVP
Trigger: TGGGACTGGCCTCTGCCCCCAGCACGCTGTATTCTG...CCCCACTCTTCCCCCATGTTCCACTTCAGGAGCCGCGGGGGCCCATCCTGACAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR CCA 90 bp GGCCTGGTGGGAACGCTGGGGGAATGGGGGAGAGTCGCTGTTTCTGACCAGAGCAGCCTGCACTCTGGGTaGTGTCTCGGCTTGCGTGGG +
Preference number: 2 (lower is better)
Translates to: GLVGTLGEWGRVAVSDQSSLHSG*CLGLRG
Trigger: CCCACGCAAGCCGAGACACCACCCAGAGTGCAGGCT...GCTCTGGTCAGAAACAGCGACTCTCCCCCATTCCCCCAGCGTTCCCACCAGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR CCA 90 bp GCCAGAGCTTCCTGCCCTTCAGCTGGAAGGAGCCGGAAGGAGCTGGAAGGAAGGCCTAGGCAGGGGGTGTaGAGCTGGCCGTGCCAGAAG +
Preference number: 2 (lower is better)
Translates to: ARASCPSAGRSRKELEGRPRQGV*SWPCQK
Trigger: CTTCTGGCACGGCCAGCTCCACACCCCCTGCCTAGG...CCTTCCTTCCAGCTCCTTCCGGCTCCTTCCAGCTGAAGGGCAGGAAGCTCTGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR CCA 90 bp CACACTACAGGGGCTCTTGGGACAGCCTCACTGGACTCAGGGTGGACAGGTAACGCCAGGCCCTCGCCCTaGCTGCAGCCAGATCCCCTG +
Preference number: 2 (lower is better)
Translates to: HTTGALGTASLDSGWTGNARPSP*LQPDPL
Trigger: CAGGGGATCTGGCTGCAGCCAGGGCGAGGGCCTGGC...GTTACCTGTCCACCCTGAGTCCAGTGAGGCTGTCCCAAGAGCCCCTGTAGTGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR CCA 90 bp CCCCAAGAGATGGGTGTGGTGCCTGGGGCATGGGTCTTAGCCTTTCTGGTCTCAGCCAGGCCCTCGCCCTaGCTGCAGCCAGATCCCCTG +
Preference number: 2 (lower is better)
Translates to: PQEMGVVPGAWVLAFLVSARPSP*LQPDPL
Trigger: CAGGGGATCTGGCTGCAGCCAGGGCGAGGGCCTGGC...TGAGACCAGAAAGGCTAAGACCCATGCCCCAGGCACCACACCCATCTCTTGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR CCA 90 bp AGCACACTACAGGGGCTCTTGGGACAGCCTCACTGGACTCAGGGTGGACAGGTACCCCGGGTGTCAGGATaGGCCCCCGCGGCTCCTGAA +
Preference number: 2 (lower is better)
Translates to: STLQGLLGQPHWTQGGQVPRVSG*APAAPE
Trigger: TTCAGGAGCCGCGGGGGCCCATCCTGACACCCGGGG...TACCTGTCCACCCTGAGTCCAGTGAGGCTGTCCCAAGAGCCCCTGTAGTGTGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR TCA 90 bp TCGGGTAGCAGGTGCCCAGCCCCCAAGAGATGGGTGTGGTGCCTGGGGCATGGGGAAGGTCCTGCCTCCTaGGGCAGTTTTGGACACACA +
Preference number: 2 (lower is better)
Translates to: SGSRCPAPKRWVWCLGHGEGPAS*GSFGHT
Trigger: TGTGTGTCCAAAACTGCCTCAGGAGGCAGGACCTTC...CCCATGCCCCAGGCACCACACCCATCTCTTGGGGGCTGGGCACCTGCTACCCGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR TCA 90 bp GGACGGTGGGAGAGGGATGCCTGCGTCTTCGTAGACCAGGTACCTGCGGCAACACTGAGGGGCACTGGCTaGGGCGGTACCACATGCTTC +
Preference number: 2 (lower is better)
Translates to: GRWERDACVFVDQVPAATLRGTG*GGTTCF
Trigger: GAAGCATGTGGTACCGCCTCAGCCAGTGCCCCTCAG...TGTTGCCGCAGGTACCTGGTCTACGAAGACGCAGGCATCCCTCTCCCACCGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR TCA 90 bp CTACAGGGGCTCTTGGGACAGCCTCACTGGACTCAGGGTGGACAGGTAACGTACCTCGGCTTGCGTGGGTaGGGGCTCCCATTGGCCCAC +
Preference number: 2 (lower is better)
Translates to: LQGLLGQPHWTQGGQVTYLGLRG*GLPLAH
Trigger: GTGGGCCAATGGGAGCCCTCACCCACGCAAGCCGAG...GTACGTTACCTGTCCACCCTGAGTCCAGTGAGGCTGTCCCAAGAGCCCCTGTAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR GCA 90 bp GCGGTTGGGGATGGTGATGGTGTGGCGCACGCGGAAGTGCACGGCCTCCATGACACAGCCCGAAGGTCCTaGCTCCTGAGGCAGTTTTGG +
Preference number: 2 (lower is better)
Translates to: AVGDGDGVAHAEVHGLHDTARRS*LLRQFW
Trigger: CCAAAACTGCCTCAGGAGGCAGGACCTTCGGGCTGT...GTCATGGAGGCCGTGCACTTCCGCGTGCGCCACACCATCACCATCCCCAACCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
3UTR-3UTR GCA 90 bp TCGGGTAGCAGGTGCCCAGCCCCCAAGAGATGGGTGTGGTGCCTGGGGCATGGGATGCCCTGTGGACCTTaGAGTGCTAGAGAAGGTGGC +
Preference number: 2 (lower is better)
Translates to: SGSRCPAPKRWVWCLGHGMPCGP*SAREGG
Trigger: GCCACCTTCTCTAGCACTGCAAGGTCCACAGGGCAT...CCCATGCCCCAGGCACCACACCCATCTCTTGGGGGCTGGGCACCTGCTACCCGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR GCA 90 bp CAAGCGTGCACCCAGGCGACTGTGCTGTCAGCGGCCCCCGGGGAGGTGGACGGTAGTCTGTTCCCTGACTaGCACCGCCTAGAAAGGAAA +
Preference number: 2 (lower is better)
Translates to: QACTQATVLSAAPGEVDGSLFPD*HRLERK
Trigger: TTTCCTTTCTAGGCGGTGGCAGTCAGGGAACAGACT...ACCGTCCACCTCCCCGGGGGCCGCTGACAGCACAGTCGCCTGGGTGCACGCTTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR GCA 90 bp CCCCAAGAGATGGGTGTGGTGCCTGGGGCATGGGTCTTAGCCTTTCTGGTCTCAGGGGCTCCGGTTCCCTaGCCTGAAGCTGTGCTCCGG +
Preference number: 2 (lower is better)
Translates to: PQEMGVVPGAWVLAFLVSGAPVP*PEAVLR
Trigger: CCGGAGCACAGCTTCAGGGCAGGGAACCGGAGCCCC...TGAGACCAGAAAGGCTAAGACCCATGCCCCAGGCACCACACCCATCTCTTGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR GCA 90 bp GGCCTGGTGGGAACGCTGGGGGAATGGGGGAGAGTCGCTGTTTCTGACCAGAGCCGTAGACCAGGTACCTaGGGCAACACCAGTCGCTGC +
Preference number: 2 (lower is better)
Translates to: GLVGTLGEWGRVAVSDQSRRPGT*GNTSRC
Trigger: GCAGCGACTGGTGTTGCCGCAGGTACCTGGTCTACG...GCTCTGGTCAGAAACAGCGACTCTCCCCCATTCCCCCAGCGTTCCCACCAGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR GCA 90 bp TCCTTGATGGGCTGCTTGCGGGCCTTGCAGTCGGGCAGGTCGAAGCCGAAGTCCCCCGCCAGATGGTCATaGGGTACTGCTCGGGGATCT +
Preference number: 2 (lower is better)
Translates to: SLMGCLRALQSGRSKPKSPARWS*GTARGS
Trigger: AGATCCCCGAGCAGTACCGCATGACCATCTGGCGGG...GGACTTCGGCTTCGACCTGCCCGACTGCAAGGCCCGCAAGCAGCCCATCAAGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
3UTR-3UTR GCA 90 bp TCAACAAGCCCTCTGGAACTGAAGCACATCTGCGCTGGGCTGAGGAACCCCGGGGCTGCTTGCGGGCCTTaGAGTCGGGCAGGTCGAAGC +
Preference number: 2 (lower is better)
Translates to: STSPLELKHICAGLRNPGAACGP*SRAGRS
Trigger: GCTTCGACCTGCCCGACTGCAAGGCCCGCAAGCAGC...CCCGGGGTTCCTCAGCCCAGCGCAGATGTGCTTCAGTTCCAGAGGGCTTGTTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000604074.5
3UTR-3UTR GCA 90 bp AGCCAGGCGAGGCCCTCAGTGGATCTCGGCCTCCGTGAACTCCTCCTTGATGGGTCCTCCTTGATGGGCTaGTTGCGGGCCTTGCAGTCG +
Preference number: 2 (lower is better)
Translates to: SQARPSVDLGLRELLLDGSSLMG*LRALQS
Trigger: CGACTGCAAGGCCCGCAAGCAGCCCATCAAGGAGGA...CCCATCAAGGAGGAGTTCACGGAGGCCGAGATCCACTGAGGGCCTCGCCTGGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
3UTR-3UTR CCA 90 bp CAGAGCGACTTGGACAGATGTGAGCTGACCTGCCTGGCGAGCTCCTTCTGCCTTGGCAGCTTGGGTCTCTaGGCGGTGGCGCAGGCTGCA +
Preference number: 2 (lower is better)
Translates to: QSDLDRCELTCLASSFCLGSLGL*AVAQAA
Trigger: TGCAGCCTGCGCCACCGCCCAGAGACCCAAGCTGCC...AAGGCAGAAGGAGCTCGCCAGGCAGGTCAGCTCACATCTGTCCAAGTCGCTCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR CCA 90 bp GATGGTGTGGCGCACGCGGAAGTGCACGGCCTCCATGACCCGCTGGCGCTGCAGCTCCTGAGGCAGTTTTaGACACACAGGAAGGAGAGG +
Preference number: 2 (lower is better)
Translates to: DGVAHAEVHGLHDPLALQLLRQF*THRKER
Trigger: CCTCTCCTTCCTGTGTGTCCAAAACTGCCTCAGGAG...CTGCAGCGCCAGCGGGTCATGGAGGCCGTGCACTTCCGCGTGCGCCACACCATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
3UTR-3UTR CCA 90 bp GCCCTTCCCAGGAGCACACTACAGGGGCTCTTGGGACAGCCTCACTGGACTCAGCAGGCTGAGGGGCACTaGCTGAGGCGGTACCACATG +
Preference number: 2 (lower is better)
Translates to: ALPRSTLQGLLGQPHWTQQAEGH*LRRYHM
Trigger: CATGTGGTACCGCCTCAGCCAGTGCCCCTCAGCCTG...CTGAGTCCAGTGAGGCTGTCCCAAGAGCCCCTGTAGTGTGCTCCTGGGAAGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR CCA 90 bp GTGTCAGGATGGGCCCCCGCGGCTCCTGAAGTGGAACATGGGGGAAGAGTGGGGCAAGTCCCGCCCACCTaGCTTCTCACTCAGCTTCCT +
Preference number: 2 (lower is better)
Translates to: VSGWAPAAPEVEHGGRVGQVPPT*LLTQLP
Trigger: AGGAAGCTGAGTGAGAAGCCAGGTGGGCGGGACTTG...CCCCACTCTTCCCCCATGTTCCACTTCAGGAGCCGCGGGGGCCCATCCTGACAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR CCA 90 bp GGCCACCAAGGCTCAGGCTGCTCCTCGTGGATGGAGGTGGCCCCAGAAAGGGCCGAGGAGCTGCTCCCATaGCAGAGCATTCCTGCAGAT +
Preference number: 2 (lower is better)
Translates to: GHQGSGCSSWMEVAPERAEELLP*QSIPAD
Trigger: ATCTGCAGGAATGCTCTGCCATGGGAGCAGCTCCTC...GGCCCTTTCTGGGGCCACCTCCATCCACGAGGAGCAGCCTGAGCCTTGGTGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR CCA 90 bp CAGCTGGGGCCATCTGGCTGCTCCGTGTTCTGGCCGGCTTCCTTGGACATCTGGTCAGGCTGCTCCTCGTaGATGGAGGTGGCCCCAGAA +
Preference number: 2 (lower is better)
Translates to: QLGPSGCSVFWPASLDIWSGCSS*MEVAPE
Trigger: TTCTGGGGCCACCTCCATCCACGAGGAGCAGCCTGA...CCAGATGTCCAAGGAAGCCGGCCAGAACACGGAGCAGCCAGATGGCCCCAGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR CCA 90 bp GCCAGAGCTTCCTGCCCTTCAGCTGGAAGGAGCCGGAAGGAGCTGGAAGGAAGGAGCCTGCACTCTGGGTaGTGTCTCGGCTTGCGTGGG +
Preference number: 2 (lower is better)
Translates to: ARASCPSAGRSRKELEGRSLHSG*CLGLRG
Trigger: CCCACGCAAGCCGAGACACCACCCAGAGTGCAGGCT...CCTTCCTTCCAGCTCCTTCCGGCTCCTTCCAGCTGAAGGGCAGGAAGCTCTGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR CCA 90 bp TTTCACAGCTGCTTCTCCAGTGCAAGGAGGCTGCATGGGCTCCCTAGACAGGTGGCCAGGCCCTCGCCCTaGCTGCAGCCAGATCCCCTG +
Preference number: 2 (lower is better)
Translates to: FHSCFSSARRLHGLPRQVARPSP*LQPDPL
Trigger: CAGGGGATCTGGCTGCAGCCAGGGCGAGGGCCTGGC...CACCTGTCTAGGGAGCCCATGCAGCCTCCTTGCACTGGAGAAGCAGCTGTGAAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR CCA 90 bp TTTCACAGCTGCTTCTCCAGTGCAAGGAGGCTGCATGGGCTCCCTAGACAGGTGCCCCGGGTGTCAGGATaGGCCCCCGCGGCTCCTGAA +
Preference number: 2 (lower is better)
Translates to: FHSCFSSARRLHGLPRQVPRVSG*APAAPE
Trigger: TTCAGGAGCCGCGGGGGCCCATCCTGACACCCGGGG...CACCTGTCTAGGGAGCCCATGCAGCCTCCTTGCACTGGAGAAGCAGCTGTGAAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR CCA 90 bp GTGTCAGGATGGGCCCCCGCGGCTCCTGAAGTGGAACATGGGGGAAGAGTGGGGCACTACAGGGGCTCTTaGGACAGCCTCACTGGACTC +
Preference number: 2 (lower is better)
Translates to: VSGWAPAAPEVEHGGRVGHYRGS*DSLTGL
Trigger: GAGTCCAGTGAGGCTGTCCCAAGAGCCCCTGTAGTG...CCCCACTCTTCCCCCATGTTCCACTTCAGGAGCCGCGGGGGCCCATCCTGACAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR TCA 90 bp GGGTGTCAGGATGGGCCCCCGCGGCTCCTGAAGTGGAACATGGGGGAAGAGTGGGAAGGTCCTGCCTCCTaGGGCAGTTTTGGACACACA +
Preference number: 2 (lower is better)
Translates to: GCQDGPPRLLKWNMGEEWEGPAS*GSFGHT
Trigger: TGTGTGTCCAAAACTGCCTCAGGAGGCAGGACCTTC...CCACTCTTCCCCCATGTTCCACTTCAGGAGCCGCGGGGGCCCATCCTGACACCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR TCA 90 bp CTACAGGGGCTCTTGGGACAGCCTCACTGGACTCAGGGTGGACAGGTAACGTACGCTGTCCCTTTCTGCTaGGGGGTCCCCGAGGAGAGG +
Preference number: 2 (lower is better)
Translates to: LQGLLGQPHWTQGGQVTYAVPFC*GVPEER
Trigger: CCTCTCCTCGGGGACCCCTCAGCAGAAAGGGACAGC...GTACGTTACCTGTCCACCCTGAGTCCAGTGAGGCTGTCCCAAGAGCCCCTGTAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR TCA 90 bp CACACTACAGGGGCTCTTGGGACAGCCTCACTGGACTCAGGGTGGACAGGTAACCCCACCTGCCTGCAATaGAGGGCCTCGTCACACCCG +
Preference number: 2 (lower is better)
Translates to: HTTGALGTASLDSGWTGNPTCLQ*RASSHP
Trigger: CGGGTGTGACGAGGCCCTTCATTGCAGGCAGGTGGG...GTTACCTGTCCACCCTGAGTCCAGTGAGGCTGTCCCAAGAGCCCCTGTAGTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR GCA 90 bp TCCTTGATGGGCTGCTTGCGGGCCTTGCAGTCGGGCAGGTCGAAGCCGAAGTCCACAGCCCGAAGGTCCTaGCTCCTGAGGCAGTTTTGG +
Preference number: 2 (lower is better)
Translates to: SLMGCLRALQSGRSKPKSTARRS*LLRQFW
Trigger: CCAAAACTGCCTCAGGAGGCAGGACCTTCGGGCTGT...GGACTTCGGCTTCGACCTGCCCGACTGCAAGGCCCGCAAGCAGCCCATCAAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
3UTR-3UTR GCA 90 bp TTTCACAGCTGCTTCTCCAGTGCAAGGAGGCTGCATGGGCTCCCTAGACAGGTGGGATGGGCCGGACCTTaGCTTTCCCCGGGCACAGCC +
Preference number: 2 (lower is better)
Translates to: FHSCFSSARRLHGLPRQVGWAGP*LSPGTA
Trigger: GGCTGTGCCCGGGGAAAGGCAAGGTCCGGCCCATCC...CACCTGTCTAGGGAGCCCATGCAGCCTCCTTGCACTGGAGAAGCAGCTGTGAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR GCA 90 bp TGCGCTGGGCTGAGGAACCCCGGGTGTCAGGATGGGCCCCCGCGGCTCCTGAAGACACAGTCACTTGGCTaGTCACTACTATCCAGAACC +
Preference number: 2 (lower is better)
Translates to: CAGLRNPGCQDGPPRLLKTQSLG*SLLSRT
Trigger: GGTTCTGGATAGTAGTGAGCAGCCAAGTGACTGTGT...CTTCAGGAGCCGCGGGGGCCCATCCTGACACCCGGGGTTCCTCAGCCCAGCGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR GCA 90 bp CCTGCACTCTGGGTGGTGTCTCGGCTTGCGTGGGTGAGGGCTCCCATTGGCCCAATGCCCTGTGGACCTTaGAGTGCTAGAGAAGGTGGC +
Preference number: 2 (lower is better)
Translates to: PALWVVSRLAWVRAPIGPMPCGP*SAREGG
Trigger: GCCACCTTCTCTAGCACTGCAAGGTCCACAGGGCAT...TGGGCCAATGGGAGCCCTCACCCACGCAAGCCGAGACACCACCCAGAGTGCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR GCA 90 bp GGACGGTGGGAGAGGGATGCCTGCGTCTTCGTAGACCAGGTACCTGCGGCAACACACCAAGGCTCAGGCTaGTCCTCGTGGATGGAGGTG +
Preference number: 2 (lower is better)
Translates to: GRWERDACVFVDQVPAATHQGSG*SSWMEV
Trigger: CACCTCCATCCACGAGGAGCAGCCTGAGCCTTGGTG...TGTTGCCGCAGGTACCTGGTCTACGAAGACGCAGGCATCCCTCTCCCACCGTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR GCA 90 bp GCCCTTCCCAGGAGCACACTACAGGGGCTCTTGGGACAGCCTCACTGGACTCAGCCTGCCCTGAAGCTGTaGTCCGGGACGGTCAAGGTT +
Preference number: 2 (lower is better)
Translates to: ALPRSTLQGLLGQPHWTQPALKL*SGTVKV
Trigger: AACCTTGACCGTCCCGGAGCACAGCTTCAGGGCAGG...CTGAGTCCAGTGAGGCTGTCCCAAGAGCCCCTGTAGTGTGCTCCTGGGAAGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR GCA 90 bp CAGAGCGACTTGGACAGATGTGAGCTGACCTGCCTGGCGAGCTCCTTCTGCCTTAGGGGCCAGGCAGCCTaGACTCTGGGTGGTGTCTCG +
Preference number: 2 (lower is better)
Translates to: QSDLDRCELTCLASSFCLRGQAA*TLGGVS
Trigger: CGAGACACCACCCAGAGTGCAGGCTGCCTGGCCCCT...AAGGCAGAAGGAGCTCGCCAGGCAGGTCAGCTCACATCTGTCCAAGTCGCTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR GCA 90 bp CAGAGCGACTTGGACAGATGTGAGCTGACCTGCCTGGCGAGCTCCTTCTGCCTTCGACAGCCCCGTTCCTaGTGCCCCCACAAGCGTGCA +
Preference number: 2 (lower is better)
Translates to: QSDLDRCELTCLASSFCLRQPRS*CPHKRA
Trigger: TGCACGCTTGTGGGGGCAGCAGGAACGGGGCTGTCG...AAGGCAGAAGGAGCTCGCCAGGCAGGTCAGCTCACATCTGTCCAAGTCGCTCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR GCA 90 bp CACACTACAGGGGCTCTTGGGACAGCCTCACTGGACTCAGGGTGGACAGGTAACCTGGGGCCATCTGGCTaGTCCGTGTTCTGGCCGGCT +
Preference number: 2 (lower is better)
Translates to: HTTGALGTASLDSGWTGNLGPSG*SVFWPA
Trigger: AGCCGGCCAGAACACGGAGCAGCCAGATGGCCCCAG...GTTACCTGTCCACCCTGAGTCCAGTGAGGCTGTCCCAAGAGCCCCTGTAGTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR GCA 90 bp GGCCTGGTGGGAACGCTGGGGGAATGGGGGAGAGTCGCTGTTTCTGACCAGAGCAGATGTGAGCTGACCTaGCTGGCGAGCTCCTTCTGC +
Preference number: 2 (lower is better)
Translates to: GLVGTLGEWGRVAVSDQSRCELT*LASSFC
Trigger: GCAGAAGGAGCTCGCCAGGCAGGTCAGCTCACATCT...GCTCTGGTCAGAAACAGCGACTCTCCCCCATTCCCCCAGCGTTCCCACCAGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR CCA 90 bp GGCCACCAAGGCTCAGGCTGCTCCTCGTGGATGGAGGTGGCCCCAGAAAGGGCCCTCCTGAGGCAGTTTTaGACACACAGGAAGGAGAGG +
Preference number: 2 (lower is better)
Translates to: GHQGSGCSSWMEVAPERALLRQF*THRKER
Trigger: CCTCTCCTTCCTGTGTGTCCAAAACTGCCTCAGGAG...GGCCCTTTCTGGGGCCACCTCCATCCACGAGGAGCAGCCTGAGCCTTGGTGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR CCA 90 bp TTTCACAGCTGCTTCTCCAGTGCAAGGAGGCTGCATGGGCTCCCTAGACAGGTGGGCGGCTTCGGTGGCTaGGCCTTTCCTGGGGCCTGT +
Preference number: 2 (lower is better)
Translates to: FHSCFSSARRLHGLPRQVGGFGG*AFPGAC
Trigger: ACAGGCCCCAGGAAAGGCCCAGCCACCGAAGCCGCC...CACCTGTCTAGGGAGCCCATGCAGCCTCCTTGCACTGGAGAAGCAGCTGTGAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR CCA 90 bp CTCCCCACCCGGCCTTCCTGGGAACAAGTCCCGCCCACCTGGCTTCTCACTCAGAGGACCTCGCCTGGTTaGGAGATGACAGTCTCTAGG +
Preference number: 2 (lower is better)
Translates to: LPTRPSWEQVPPTWLLTQRTSPG*EMTVSR
Trigger: CCTAGAGACTGTCATCTCCCAACCAGGCGAGGTCCT...CTGAGTGAGAAGCCAGGTGGGCGGGACTTGTTCCCAGGAAGGCCGGGTGGGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR CCA 90 bp CAGCTGGGGCCATCTGGCTGCTCCGTGTTCTGGCCGGCTTCCTTGGACATCTGGTCAGCTTCCTCAGCCTaGCTCATGGGCGCTAGGTTG +
Preference number: 2 (lower is better)
Translates to: QLGPSGCSVFWPASLDIWSASSA*LMGARL
Trigger: CAACCTAGCGCCCATGAGCCAGGCTGAGGAAGCTGA...CCAGATGTCCAAGGAAGCCGGCCAGAACACGGAGCAGCCAGATGGCCCCAGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR CCA 90 bp GCCCTTCCCAGGAGCACACTACAGGGGCTCTTGGGACAGCCTCACTGGACTCAGTCAGGCTGCTCCTCGTaGATGGAGGTGGCCCCAGAA +
Preference number: 2 (lower is better)
Translates to: ALPRSTLQGLLGQPHWTQSGCSS*MEVAPE
Trigger: TTCTGGGGCCACCTCCATCCACGAGGAGCAGCCTGA...CTGAGTCCAGTGAGGCTGTCCCAAGAGCCCCTGTAGTGTGCTCCTGGGAAGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR CCA 90 bp ATGGCAATAAGATGGAGAGCTGAGGTGACATGCAGCTGGGGTGGCTGCGCCACCCCTAGGCAGGGGGTGTaGAGCTGGCCGTGCCAGAAG +
Preference number: 2 (lower is better)
Translates to: MAIRWRAEVTCSWGGCATPRQGV*SWPCQK
Trigger: CTTCTGGCACGGCCAGCTCCACACCCCCTGCCTAGG...GGTGGCGCAGCCACCCCAGCTGCATGTCACCTCAGCTCTCCATCTTATTGCCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR CCA 90 bp GGGTGTCAGGATGGGCCCCCGCGGCTCCTGAAGTGGAACATGGGGGAAGAGTGGGTCCTGATCTGGGGATaGGGGCTGTGTCTAACCTTG +
Preference number: 2 (lower is better)
Translates to: GCQDGPPRLLKWNMGEEWVLIWG*GLCLTL
Trigger: CAAGGTTAGACACAGCCCCCATCCCCAGATCAGGAC...CCACTCTTCCCCCATGTTCCACTTCAGGAGCCGCGGGGGCCCATCCTGACACCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR CAA 90 bp AGGAGCTGCTCCCATGGCAGAGCATTCCTGCAGATTTGCCTGGATTaGCCCTTCCTGGGGTTCCCTCTAGGCTTCCTCCCCACCCGGCCT +
Preference number: 2 (lower is better)
Translates to: RSCSHGRAFLQICLD*PFLGFPLGFLPTRP
Trigger: AGGCCGGGTGGGGAGGAAGCCTAGAGGGAACCCCAGGAAGGGCAAATCCAGGCAAATCTGCAGGAATGCTCTGCCATGGGAGCAGCTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR TCA 90 bp CACACTACAGGGGCTCTTGGGACAGCCTCACTGGACTCAGGGTGGACAGGTAACCTGAGGGGCACTGGCTaGGGCGGTACCACATGCTTC +
Preference number: 2 (lower is better)
Translates to: HTTGALGTASLDSGWTGNLRGTG*GGTTCF
Trigger: GAAGCATGTGGTACCGCCTCAGCCAGTGCCCCTCAG...GTTACCTGTCCACCCTGAGTCCAGTGAGGCTGTCCCAAGAGCCCCTGTAGTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR TCA 90 bp CCCATTGGCCCACCTGCCTGCAATGAAGGGCCTCGTCACACCCGTGAGGCCCCCTCATGGGCGCTAGGTTaGACTCCAAAGAGAATGCTG +
Preference number: 2 (lower is better)
Translates to: PIGPPACNEGPRHTREAPSWALG*TPKRML
Trigger: CAGCATTCTCTTTGGAGTTCAACCTAGCGCCCATGA...GGGGGCCTCACGGGTGTGACGAGGCCCTTCATTGCAGGCAGGTGGGCCAATGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR GCA 90 bp CTCCCCACCCGGCCTTCCTGGGAACAAGTCCCGCCCACCTGGCTTCTCACTCAGAGATTTGCCTGGATTTaGCCTTCCTGGGGTTCCCTC +
Preference number: 2 (lower is better)
Translates to: LPTRPSWEQVPPTWLLTQRFAWI*PSWGSL
Trigger: GAGGGAACCCCAGGAAGGGCAAATCCAGGCAAATCT...CTGAGTGAGAAGCCAGGTGGGCGGGACTTGTTCCCAGGAAGGCCGGGTGGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR GCA 90 bp GGCCACCAAGGCTCAGGCTGCTCCTCGTGGATGGAGGTGGCCCCAGAAAGGGCCAGTCTGTTCCCTGACTaGCACCGCCTAGAAAGGAAA +
Preference number: 2 (lower is better)
Translates to: GHQGSGCSSWMEVAPERASLFPD*HRLERK
Trigger: TTTCCTTTCTAGGCGGTGGCAGTCAGGGAACAGACT...GGCCCTTTCTGGGGCCACCTCCATCCACGAGGAGCAGCCTGAGCCTTGGTGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR GCA 90 bp CTACAGGGGCTCTTGGGACAGCCTCACTGGACTCAGGGTGGACAGGTAACGTACCCCAGAAAGGGCCTGTaGAGACTCTGTCTCCCCGGG +
Preference number: 2 (lower is better)
Translates to: LQGLLGQPHWTQGGQVTYPRKGL*RLCLPG
Trigger: CCCGGGGAGACAGAGTCTGCACAGGCCCTTTCTGGG...GTACGTTACCTGTCCACCCTGAGTCCAGTGAGGCTGTCCCAAGAGCCCCTGTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR GCA 90 bp GCCAGAGCTTCCTGCCCTTCAGCTGGAAGGAGCCGGAAGGAGCTGGAAGGAAGGATTGGCCCACCTGCCTaGAATGAAGGGCCTCGTCAC +
Preference number: 2 (lower is better)
Translates to: ARASCPSAGRSRKELEGRIGPPA*NEGPRH
Trigger: GTGACGAGGCCCTTCATTGCAGGCAGGTGGGCCAAT...CCTTCCTTCCAGCTCCTTCCGGCTCCTTCCAGCTGAAGGGCAGGAAGCTCTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR GCA 90 bp GCCCTTCCCAGGAGCACACTACAGGGGCTCTTGGGACAGCCTCACTGGACTCAGATTGGCCCACCTGCCTaGAATGAAGGGCCTCGTCAC +
Preference number: 2 (lower is better)
Translates to: ALPRSTLQGLLGQPHWTQIGPPA*NEGPRH
Trigger: GTGACGAGGCCCTTCATTGCAGGCAGGTGGGCCAAT...CTGAGTCCAGTGAGGCTGTCCCAAGAGCCCCTGTAGTGTGCTCCTGGGAAGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR GCA 90 bp AGCACACTACAGGGGCTCTTGGGACAGCCTCACTGGACTCAGGGTGGACAGGTAGGCTCCCTAGACAGGTaGAGCTGGGGCCATCTGGCT +
Preference number: 2 (lower is better)
Translates to: STLQGLLGQPHWTQGGQVGSLDR*SWGHLA
Trigger: AGCCAGATGGCCCCAGCTGCACCTGTCTAGGGAGCC...TACCTGTCCACCCTGAGTCCAGTGAGGCTGTCCCAAGAGCCCCTGTAGTGTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR CCA 90 bp CAGCTGGGGCCATCTGGCTGCTCCGTGTTCTGGCCGGCTTCCTTGGACATCTGGTGGAAGGACCTCGCCTaGTTGGGAGATGACAGTCTC +
Preference number: 2 (lower is better)
Translates to: QLGPSGCSVFWPASLDIWWKDLA*LGDDSL
Trigger: GAGACTGTCATCTCCCAACCAGGCGAGGTCCTTCCA...CCAGATGTCCAAGGAAGCCGGCCAGAACACGGAGCAGCCAGATGGCCCCAGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR CCA 90 bp GGGCAGGAAGGAGGCGGTCCTGCAGAATACAGCGTGCTGGGGGCAGAGGCCAGTGAGGATCCTTTCCTTTaGAAGGACCTCGCCTGGTTG +
Preference number: 2 (lower is better)
Translates to: GQEGGGPAEYSVLGAEASEDPFL*KDLAWL
Trigger: CAACCAGGCGAGGTCCTTCCAAAGGAAAGGATCCTC...ACTGGCCTCTGCCCCCAGCACGCTGTATTCTGCAGGACCGCCTCCTTCCTGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR CCA 90 bp GCCAGAGCTTCCTGCCCTTCAGCTGGAAGGAGCCGGAAGGAGCTGGAAGGAAGGTCAGCTTCCTCAGCCTaGCTCATGGGCGCTAGGTTG +
Preference number: 2 (lower is better)
Translates to: ARASCPSAGRSRKELEGRSASSA*LMGARL
Trigger: CAACCTAGCGCCCATGAGCCAGGCTGAGGAAGCTGA...CCTTCCTTCCAGCTCCTTCCGGCTCCTTCCAGCTGAAGGGCAGGAAGCTCTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR CCA 90 bp TCAACAAGCCCTCTGGAACTGAAGCACATCTGCGCTGGGCTGAGGAACCCCGGGGGCCTACTAACTCCCTaGGGTGCTCCACGAAGGCCT +
Preference number: 2 (lower is better)
Translates to: STSPLELKHICAGLRNPGGLLTP*GAPRRP
Trigger: AGGCCTTCGTGGAGCACCCCAGGGAGTTAGTAGGCC...CCCGGGGTTCCTCAGCCCAGCGCAGATGTGCTTCAGTTCCAGAGGGCTTGTTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR CCA 90 bp ATGGCAATAAGATGGAGAGCTGAGGTGACATGCAGCTGGGGTGGCTGCGCCACCCCTCGTGGATGGAGGTaGCCCCAGAAAGGGCCTGTG +
Preference number: 2 (lower is better)
Translates to: MAIRWRAEVTCSWGGCATPRGWR*PQKGPV
Trigger: CACAGGCCCTTTCTGGGGCCACCTCCATCCACGAGG...GGTGGCGCAGCCACCCCAGCTGCATGTCACCTCAGCTCTCCATCTTATTGCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR CCA 90 bp ATGGCAATAAGATGGAGAGCTGAGGTGACATGCAGCTGGGGTGGCTGCGCCACCAGCCTGCACTCTGGGTaGTGTCTCGGCTTGCGTGGG +
Preference number: 2 (lower is better)
Translates to: MAIRWRAEVTCSWGGCATSLHSG*CLGLRG
Trigger: CCCACGCAAGCCGAGACACCACCCAGAGTGCAGGCT...GGTGGCGCAGCCACCCCAGCTGCATGTCACCTCAGCTCTCCATCTTATTGCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR CCA 90 bp CACACTACAGGGGCTCTTGGGACAGCCTCACTGGACTCAGGGTGGACAGGTAACAGCCTGCACTCTGGGTaGTGTCTCGGCTTGCGTGGG +
Preference number: 2 (lower is better)
Translates to: HTTGALGTASLDSGWTGNSLHSG*CLGLRG
Trigger: CCCACGCAAGCCGAGACACCACCCAGAGTGCAGGCT...GTTACCTGTCCACCCTGAGTCCAGTGAGGCTGTCCCAAGAGCCCCTGTAGTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR CCA 90 bp AGCACACTACAGGGGCTCTTGGGACAGCCTCACTGGACTCAGGGTGGACAGGTAAGGCAGCCTGCACTCTaGGTGGTGTCTCGGCTTGCG +
Preference number: 2 (lower is better)
Translates to: STLQGLLGQPHWTQGGQVRQPAL*VVSRLA
Trigger: CGCAAGCCGAGACACCACCCAGAGTGCAGGCTGCCT...TACCTGTCCACCCTGAGTCCAGTGAGGCTGTCCCAAGAGCCCCTGTAGTGTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR CCA 90 bp GCCCTTCCCAGGAGCACACTACAGGGGCTCTTGGGACAGCCTCACTGGACTCAGGATGGGTGTGGTGCCTaGGGCATGGGTCTTAGCCTT +
Preference number: 2 (lower is better)
Translates to: ALPRSTLQGLLGQPHWTQDGCGA*GMGLSL
Trigger: AAGGCTAAGACCCATGCCCCAGGCACCACACCCATC...CTGAGTCCAGTGAGGCTGTCCCAAGAGCCCCTGTAGTGTGCTCCTGGGAAGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR CCA 90 bp GGCCTGGTGGGAACGCTGGGGGAATGGGGGAGAGTCGCTGTTTCTGACCAGAGCTTGGGACAGCCTCACTaGACTCAGGGTGGACAGGTA +
Preference number: 2 (lower is better)
Translates to: GLVGTLGEWGRVAVSDQSLGQPH*TQGGQV
Trigger: TACCTGTCCACCCTGAGTCCAGTGAGGCTGTCCCAA...GCTCTGGTCAGAAACAGCGACTCTCCCCCATTCCCCCAGCGTTCCCACCAGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR CAA 90 bp ACGCTGGGGGAATGGGGGAGAGTCGCTGTTTCTGACCAGAGCGACTaGGACAGATGTGAGCTGACCTGCCTGGCGAGCTCCTTCTGCCTT +
Preference number: 2 (lower is better)
Translates to: TLGEWGRVAVSDQSD*DRCELTCLASSFCL
Trigger: AAGGCAGAAGGAGCTCGCCAGGCAGGTCAGCTCACATCTGTCCAAGTCGCTCTGGTCAGAAACAGCGACTCTCCCCCATTCCCCCAGCGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR TCA 90 bp GGGTGTCAGGATGGGCCCCCGCGGCTCCTGAAGTGGAACATGGGGGAAGAGTGGTCATGGGCGCTAGGTTaGACTCCAAAGAGAATGCTG +
Preference number: 2 (lower is better)
Translates to: GCQDGPPRLLKWNMGEEWSWALG*TPKRML
Trigger: CAGCATTCTCTTTGGAGTTCAACCTAGCGCCCATGA...CCACTCTTCCCCCATGTTCCACTTCAGGAGCCGCGGGGGCCCATCCTGACACCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR TCA 90 bp AGCACACTACAGGGGCTCTTGGGACAGCCTCACTGGACTCAGGGTGGACAGGTAGATGGAGAGCTGAGGTaGCATGCAGCTGGGGTGGCT +
Preference number: 2 (lower is better)
Translates to: STLQGLLGQPHWTQGGQVDGELR*HAAGVA
Trigger: AGCCACCCCAGCTGCATGTCACCTCAGCTCTCCATC...TACCTGTCCACCCTGAGTCCAGTGAGGCTGTCCCAAGAGCCCCTGTAGTGTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR TCA 90 bp AGCACACTACAGGGGCTCTTGGGACAGCCTCACTGGACTCAGGGTGGACAGGTACAAGCCCTCTGGAACTaGAGCACATCTGCGCTGGGC +
Preference number: 2 (lower is better)
Translates to: STLQGLLGQPHWTQGGQVQALWN*STSALG
Trigger: GCCCAGCGCAGATGTGCTTCAGTTCCAGAGGGCTTG...TACCTGTCCACCCTGAGTCCAGTGAGGCTGTCCCAAGAGCCCCTGTAGTGTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR GCA 90 bp CAGAGCGACTTGGACAGATGTGAGCTGACCTGCCTGGCGAGCTCCTTCTGCCTTCTGCAGAATACAGCGTaGTGGGGGCAGAGGCCAGTC +
Preference number: 2 (lower is better)
Translates to: QSDLDRCELTCLASSFCLLQNTA*WGQRPV
Trigger: GACTGGCCTCTGCCCCCAGCACGCTGTATTCTGCAG...AAGGCAGAAGGAGCTCGCCAGGCAGGTCAGCTCACATCTGTCCAAGTCGCTCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR GCA 90 bp CCCCAAGAGATGGGTGTGGTGCCTGGGGCATGGGTCTTAGCCTTTCTGGTCTCAGGAAGGAGGCGGTCCTaGAGAATACAGCGTGCTGGG +
Preference number: 2 (lower is better)
Translates to: PQEMGVVPGAWVLAFLVSGRRRS*RIQRAG
Trigger: CCCAGCACGCTGTATTCTGCAGGACCGCCTCCTTCC...TGAGACCAGAAAGGCTAAGACCCATGCCCCAGGCACCACACCCATCTCTTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR GCA 90 bp CTCCCCACCCGGCCTTCCTGGGAACAAGTCCCGCCCACCTGGCTTCTCACTCAGAGTCTGTTCCCTGACTaGCACCGCCTAGAAAGGAAA +
Preference number: 2 (lower is better)
Translates to: LPTRPSWEQVPPTWLLTQSLFPD*HRLERK
Trigger: TTTCCTTTCTAGGCGGTGGCAGTCAGGGAACAGACT...CTGAGTGAGAAGCCAGGTGGGCGGGACTTGTTCCCAGGAAGGCCGGGTGGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR GCA 90 bp GTGTCAGGATGGGCCCCCGCGGCTCCTGAAGTGGAACATGGGGGAAGAGTGGGGAGTCTGTTCCCTGACTaGCACCGCCTAGAAAGGAAA +
Preference number: 2 (lower is better)
Translates to: VSGWAPAAPEVEHGGRVGSLFPD*HRLERK
Trigger: TTTCCTTTCTAGGCGGTGGCAGTCAGGGAACAGACT...CCCCACTCTTCCCCCATGTTCCACTTCAGGAGCCGCGGGGGCCCATCCTGACAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR GCA 90 bp AGCACACTACAGGGGCTCTTGGGACAGCCTCACTGGACTCAGGGTGGACAGGTACACCAAGGCTCAGGCTaGTCCTCGTGGATGGAGGTG +
Preference number: 2 (lower is better)
Translates to: STLQGLLGQPHWTQGGQVHQGSG*SSWMEV
Trigger: CACCTCCATCCACGAGGAGCAGCCTGAGCCTTGGTG...TACCTGTCCACCCTGAGTCCAGTGAGGCTGTCCCAAGAGCCCCTGTAGTGTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR GCA 90 bp CTACAGGGGCTCTTGGGACAGCCTCACTGGACTCAGGGTGGACAGGTAACGTACCCTGCCCTGAAGCTGTaGTCCGGGACGGTCAAGGTT +
Preference number: 2 (lower is better)
Translates to: LQGLLGQPHWTQGGQVTYPALKL*SGTVKV
Trigger: AACCTTGACCGTCCCGGAGCACAGCTTCAGGGCAGG...GTACGTTACCTGTCCACCCTGAGTCCAGTGAGGCTGTCCCAAGAGCCCCTGTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR CCA 90 bp GCCCTTCCCAGGAGCACACTACAGGGGCTCTTGGGACAGCCTCACTGGACTCAGAGGACCTCGCCTGGTTaGGAGATGACAGTCTCTAGG +
Preference number: 2 (lower is better)
Translates to: ALPRSTLQGLLGQPHWTQRTSPG*EMTVSR
Trigger: CCTAGAGACTGTCATCTCCCAACCAGGCGAGGTCCT...CTGAGTCCAGTGAGGCTGTCCCAAGAGCCCCTGTAGTGTGCTCCTGGGAAGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR CCA 90 bp CCCATTGGCCCACCTGCCTGCAATGAAGGGCCTCGTCACACCCGTGAGGCCCCCTCAGACACAGTCACTTaGCTGCTCACTACTATCCAG +
Preference number: 2 (lower is better)
Translates to: PIGPPACNEGPRHTREAPSDTVT*LLTTIQ
Trigger: CTGGATAGTAGTGAGCAGCCAAGTGACTGTGTCTGA...GGGGGCCTCACGGGTGTGACGAGGCCCTTCATTGCAGGCAGGTGGGCCAATGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR CCA 90 bp GCAGAGAGAGTCCCCAGCCCCCGGCGCGGGCAAGACGCAGTTAGGGACATTCCCTCAGACACAGTCACTTaGCTGCTCACTACTATCCAG +
Preference number: 2 (lower is better)
Translates to: AERVPSPRRGQDAVRDIPSDTVT*LLTTIQ
Trigger: CTGGATAGTAGTGAGCAGCCAAGTGACTGTGTCTGA...GGGAATGTCCCTAACTGCGTCTTGCCCGCGCCGGGGGCTGGGGACTCTCTCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR CCA 90 bp CCCCAAGAGATGGGTGTGGTGCCTGGGGCATGGGTCTTAGCCTTTCTGGTCTCACAGAATACAGCGTGCTaGGGGCAGAGGCCAGTCCCA +
Preference number: 2 (lower is better)
Translates to: PQEMGVVPGAWVLAFLVSQNTAC*GQRPVP
Trigger: TGGGACTGGCCTCTGCCCCCAGCACGCTGTATTCTG...TGAGACCAGAAAGGCTAAGACCCATGCCCCAGGCACCACACCCATCTCTTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR CCA 90 bp TTTCACAGCTGCTTCTCCAGTGCAAGGAGGCTGCATGGGCTCCCTAGACAGGTGCAGGCTGAGGGGCACTaGCTGAGGCGGTACCACATG +
Preference number: 2 (lower is better)
Translates to: FHSCFSSARRLHGLPRQVQAEGH*LRRYHM
Trigger: CATGTGGTACCGCCTCAGCCAGTGCCCCTCAGCCTG...CACCTGTCTAGGGAGCCCATGCAGCCTCCTTGCACTGGAGAAGCAGCTGTGAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR CCA 90 bp GCCCTTCCCAGGAGCACACTACAGGGGCTCTTGGGACAGCCTCACTGGACTCAGGAGGAGCTGCTCCCATaGCAGAGCATTCCTGCAGAT +
Preference number: 2 (lower is better)
Translates to: ALPRSTLQGLLGQPHWTQEELLP*QSIPAD
Trigger: ATCTGCAGGAATGCTCTGCCATGGGAGCAGCTCCTC...CTGAGTCCAGTGAGGCTGTCCCAAGAGCCCCTGTAGTGTGCTCCTGGGAAGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR CCA 90 bp TTTCACAGCTGCTTCTCCAGTGCAAGGAGGCTGCATGGGCTCCCTAGACAGGTGCCTCGTGGATGGAGGTaGCCCCAGAAAGGGCCTGTG +
Preference number: 2 (lower is better)
Translates to: FHSCFSSARRLHGLPRQVPRGWR*PQKGPV
Trigger: CACAGGCCCTTTCTGGGGCCACCTCCATCCACGAGG...CACCTGTCTAGGGAGCCCATGCAGCCTCCTTGCACTGGAGAAGCAGCTGTGAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR CCA 90 bp TTTCACAGCTGCTTCTCCAGTGCAAGGAGGCTGCATGGGCTCCCTAGACAGGTGGCTGCTCCTCGTGGATaGAGGTGGCCCCAGAAAGGG +
Preference number: 2 (lower is better)
Translates to: FHSCFSSARRLHGLPRQVAAPRG*RWPQKG
Trigger: CCCTTTCTGGGGCCACCTCCATCCACGAGGAGCAGC...CACCTGTCTAGGGAGCCCATGCAGCCTCCTTGCACTGGAGAAGCAGCTGTGAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR CCA 90 bp CACACTACAGGGGCTCTTGGGACAGCCTCACTGGACTCAGGGTGGACAGGTAACTCAGGCTGCTCCTCGTaGATGGAGGTGGCCCCAGAA +
Preference number: 2 (lower is better)
Translates to: HTTGALGTASLDSGWTGNSGCSS*MEVAPE
Trigger: TTCTGGGGCCACCTCCATCCACGAGGAGCAGCCTGA...GTTACCTGTCCACCCTGAGTCCAGTGAGGCTGTCCCAAGAGCCCCTGTAGTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR CCA 90 bp TGCGCTGGGCTGAGGAACCCCGGGTGTCAGGATGGGCCCCCGCGGCTCCTGAAGAAAATGGCAATAAGATaGAGAGCTGAGGTGACATGC +
Preference number: 2 (lower is better)
Translates to: CAGLRNPGCQDGPPRLLKKMAIR*RAEVTC
Trigger: GCATGTCACCTCAGCTCTCCATCTTATTGCCATTTT...CTTCAGGAGCCGCGGGGGCCCATCCTGACACCCGGGGTTCCTCAGCCCAGCGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR CCA 90 bp AGCACACTACAGGGGCTCTTGGGACAGCCTCACTGGACTCAGGGTGGACAGGTAGGCTGCTCCGTGTTCTaGCCGGCTTCCTTGGACATC +
Preference number: 2 (lower is better)
Translates to: STLQGLLGQPHWTQGGQVGCSVF*PASLDI
Trigger: GATGTCCAAGGAAGCCGGCCAGAACACGGAGCAGCC...TACCTGTCCACCCTGAGTCCAGTGAGGCTGTCCCAAGAGCCCCTGTAGTGTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR TCA 90 bp CCCCAAGAGATGGGTGTGGTGCCTGGGGCATGGGTCTTAGCCTTTCTGGTCTCACCTCAGTCTGTTCCCTaGCTGCCACCGCCTAGAAAG +
Preference number: 2 (lower is better)
Translates to: PQEMGVVPGAWVLAFLVSPQSVP*LPPPRK
Trigger: CTTTCTAGGCGGTGGCAGTCAGGGAACAGACTGAGG...TGAGACCAGAAAGGCTAAGACCCATGCCCCAGGCACCACACCCATCTCTTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR GCA 90 bp CACACTACAGGGGCTCTTGGGACAGCCTCACTGGACTCAGGGTGGACAGGTAACACAGCCCGAAGGTCCTaGCTCCTGAGGCAGTTTTGG +
Preference number: 2 (lower is better)
Translates to: HTTGALGTASLDSGWTGNTARRS*LLRQFW
Trigger: CCAAAACTGCCTCAGGAGGCAGGACCTTCGGGCTGT...GTTACCTGTCCACCCTGAGTCCAGTGAGGCTGTCCCAAGAGCCCCTGTAGTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR GCA 90 bp CAGAGCGACTTGGACAGATGTGAGCTGACCTGCCTGGCGAGCTCCTTCTGCCTTACAGCCCGAAGGTCCTaGCTCCTGAGGCAGTTTTGG +
Preference number: 2 (lower is better)
Translates to: QSDLDRCELTCLASSFCLTARRS*LLRQFW
Trigger: CCAAAACTGCCTCAGGAGGCAGGACCTTCGGGCTGT...AAGGCAGAAGGAGCTCGCCAGGCAGGTCAGCTCACATCTGTCCAAGTCGCTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR GCA 90 bp TTGCATTTTCTCCTGACCACGGCGAAGTCTCAACTCTGTCTACTTTCACAGCTGGTCCCCACCCACGCCTaGCATGGAGCACGCCGGGGC +
Preference number: 2 (lower is better)
Translates to: LHFLLTTAKSQLCLLSQLVPTHA*HGARRG
Trigger: GCCCCGGCGTGCTCCATGGCAGGCGTGGGTGGGGAC...CAGCTGTGAAAGTAGACAGAGTTGAGACTTCGCCGTGGTCAGGAGAAAATGCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR GCA 90 bp GGCAGGAAGGAGGCGGTCCTGCAGAATACAGCGTGCTGGGGGCAGAGGCCAGTCACACAGTCACTTGGCTaGTCACTACTATCCAGAACC +
Preference number: 2 (lower is better)
Translates to: GRKEAVLQNTACWGQRPVTQSLG*SLLSRT
Trigger: GGTTCTGGATAGTAGTGAGCAGCCAAGTGACTGTGT...GACTGGCCTCTGCCCCCAGCACGCTGTATTCTGCAGGACCGCCTCCTTCCTGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR GCA 90 bp GGGCAGGAAGGAGGCGGTCCTGCAGAATACAGCGTGCTGGGGGCAGAGGCCAGTACACAGTCACTTGGCTaGTCACTACTATCCAGAACC +
Preference number: 2 (lower is better)
Translates to: GQEGGGPAEYSVLGAEASTQSLG*SLLSRT
Trigger: GGTTCTGGATAGTAGTGAGCAGCCAAGTGACTGTGT...ACTGGCCTCTGCCCCCAGCACGCTGTATTCTGCAGGACCGCCTCCTTCCTGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR GCA 90 bp TTTCACAGCTGCTTCTCCAGTGCAAGGAGGCTGCATGGGCTCCCTAGACAGGTGCTGCAGAATACAGCGTaGTGGGGGCAGAGGCCAGTC +
Preference number: 2 (lower is better)
Translates to: FHSCFSSARRLHGLPRQVLQNTA*WGQRPV
Trigger: GACTGGCCTCTGCCCCCAGCACGCTGTATTCTGCAG...CACCTGTCTAGGGAGCCCATGCAGCCTCCTTGCACTGGAGAAGCAGCTGTGAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR GCA 90 bp GGACGGTGGGAGAGGGATGCCTGCGTCTTCGTAGACCAGGTACCTGCGGCAACATGTCTAACCTTGCTGTaGCCTGAGGGGCTTAACTGC +
Preference number: 2 (lower is better)
Translates to: GRWERDACVFVDQVPAATCLTLL*PEGLNC
Trigger: GCAGTTAAGCCCCTCAGGGCACAGCAAGGTTAGACA...TGTTGCCGCAGGTACCTGGTCTACGAAGACGCAGGCATCCCTCTCCCACCGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR GCA 90 bp GCCAGAGCTTCCTGCCCTTCAGCTGGAAGGAGCCGGAAGGAGCTGGAAGGAAGGTGTCTAACCTTGCTGTaGCCTGAGGGGCTTAACTGC +
Preference number: 2 (lower is better)
Translates to: ARASCPSAGRSRKELEGRCLTLL*PEGLNC
Trigger: GCAGTTAAGCCCCTCAGGGCACAGCAAGGTTAGACA...CCTTCCTTCCAGCTCCTTCCGGCTCCTTCCAGCTGAAGGGCAGGAAGCTCTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR CCA 90 bp CGAGGCCCTCAGTGGATCTCGGCCTCCGTGAACTCCTCCTTGATGGGCTGCTTGCTCCTGAGGCAGTTTTaGACACACAGGAAGGAGAGG +
Preference number: 2 (lower is better)
Translates to: RGPQWISASVNSSLMGCLLLRQF*THRKER
Trigger: CCTCTCCTTCCTGTGTGTCCAAAACTGCCTCAGGAG...CAAGCAGCCCATCAAGGAGGAGTTCACGGAGGCCGAGATCCACTGAGGGCCTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
3UTR-3UTR CCA 90 bp GGACGGTGGGAGAGGGATGCCTGCGTCTTCGTAGACCAGGTACCTGCGGCAACACTCCTGAGGCAGTTTTaGACACACAGGAAGGAGAGG +
Preference number: 2 (lower is better)
Translates to: GRWERDACVFVDQVPAATLLRQF*THRKER
Trigger: CCTCTCCTTCCTGTGTGTCCAAAACTGCCTCAGGAG...TGTTGCCGCAGGTACCTGGTCTACGAAGACGCAGGCATCCCTCTCCCACCGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR CCA 90 bp CTTCAGGAGGTGGCCTCGGGTAGCAGGTGCCCAGCCCCCAAGAGATGGGTGTGGTCAGACACAGTCACTTaGCTGCTCACTACTATCCAG +
Preference number: 2 (lower is better)
Translates to: LQEVASGSRCPAPKRWVWSDTVT*LLTTIQ
Trigger: CTGGATAGTAGTGAGCAGCCAAGTGACTGTGTCTGA...CCACACCCATCTCTTGGGGGCTGGGCACCTGCTACCCGAGGCCACCTCCTGAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR CCA 90 bp CAGAGCGACTTGGACAGATGTGAGCTGACCTGCCTGGCGAGCTCCTTCTGCCTTTCAGCTTCCTCAGCCTaGCTCATGGGCGCTAGGTTG +
Preference number: 2 (lower is better)
Translates to: QSDLDRCELTCLASSFCLSASSA*LMGARL
Trigger: CAACCTAGCGCCCATGAGCCAGGCTGAGGAAGCTGA...AAGGCAGAAGGAGCTCGCCAGGCAGGTCAGCTCACATCTGTCCAAGTCGCTCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR CCA 90 bp CCCCAAGAGATGGGTGTGGTGCCTGGGGCATGGGTCTTAGCCTTTCTGGTCTCAGATGGGTGTGGTGCCTaGGGCATGGGTCTTAGCCTT +
Preference number: 2 (lower is better)
Translates to: PQEMGVVPGAWVLAFLVSDGCGA*GMGLSL
Trigger: AAGGCTAAGACCCATGCCCCAGGCACCACACCCATC...TGAGACCAGAAAGGCTAAGACCCATGCCCCAGGCACCACACCCATCTCTTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR CCA 90 bp AGCACACTACAGGGGCTCTTGGGACAGCCTCACTGGACTCAGGGTGGACAGGTACACTACAGGGGCTCTTaGGACAGCCTCACTGGACTC +
Preference number: 2 (lower is better)
Translates to: STLQGLLGQPHWTQGGQVHYRGS*DSLTGL
Trigger: GAGTCCAGTGAGGCTGTCCCAAGAGCCCCTGTAGTG...TACCTGTCCACCCTGAGTCCAGTGAGGCTGTCCCAAGAGCCCCTGTAGTGTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR CCA 90 bp CAGAGCGACTTGGACAGATGTGAGCTGACCTGCCTGGCGAGCTCCTTCTGCCTTGGAACGCTGGGGGAATaGGGGAGAGTCGCTGTTTCT +
Preference number: 2 (lower is better)
Translates to: QSDLDRCELTCLASSFCLGTLGE*GRVAVS
Trigger: AGAAACAGCGACTCTCCCCCATTCCCCCAGCGTTCC...AAGGCAGAAGGAGCTCGCCAGGCAGGTCAGCTCACATCTGTCCAAGTCGCTCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR GCA 90 bp GGCCTGGTGGGAACGCTGGGGGAATGGGGGAGAGTCGCTGTTTCTGACCAGAGCATGGCAGAGCATTCCTaGAGATTTGCCTGGATTTGC +
Preference number: 2 (lower is better)
Translates to: GLVGTLGEWGRVAVSDQSMAEHS*RFAWIC
Trigger: GCAAATCCAGGCAAATCTGCAGGAATGCTCTGCCAT...GCTCTGGTCAGAAACAGCGACTCTCCCCCATTCCCCCAGCGTTCCCACCAGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR GCA 90 bp CTACAGGGGCTCTTGGGACAGCCTCACTGGACTCAGGGTGGACAGGTAACGTACATGCCCTGTGGACCTTaGAGTGCTAGAGAAGGTGGC +
Preference number: 2 (lower is better)
Translates to: LQGLLGQPHWTQGGQVTYMPCGP*SAREGG
Trigger: GCCACCTTCTCTAGCACTGCAAGGTCCACAGGGCAT...GTACGTTACCTGTCCACCCTGAGTCCAGTGAGGCTGTCCCAAGAGCCCCTGTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR CCA 90 bp CTACAGGGGCTCTTGGGACAGCCTCACTGGACTCAGGGTGGACAGGTAACGTACAGGACCTCGCCTGGTTaGGAGATGACAGTCTCTAGG +
Preference number: 2 (lower is better)
Translates to: LQGLLGQPHWTQGGQVTYRTSPG*EMTVSR
Trigger: CCTAGAGACTGTCATCTCCCAACCAGGCGAGGTCCT...GTACGTTACCTGTCCACCCTGAGTCCAGTGAGGCTGTCCCAAGAGCCCCTGTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR CCA 90 bp CACACTACAGGGGCTCTTGGGACAGCCTCACTGGACTCAGGGTGGACAGGTAACAGGACCTCGCCTGGTTaGGAGATGACAGTCTCTAGG +
Preference number: 2 (lower is better)
Translates to: HTTGALGTASLDSGWTGNRTSPG*EMTVSR
Trigger: CCTAGAGACTGTCATCTCCCAACCAGGCGAGGTCCT...GTTACCTGTCCACCCTGAGTCCAGTGAGGCTGTCCCAAGAGCCCCTGTAGTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR CCA 90 bp CCCCAAGAGATGGGTGTGGTGCCTGGGGCATGGGTCTTAGCCTTTCTGGTCTCATGGAAGGACCTCGCCTaGTTGGGAGATGACAGTCTC +
Preference number: 2 (lower is better)
Translates to: PQEMGVVPGAWVLAFLVSWKDLA*LGDDSL
Trigger: GAGACTGTCATCTCCCAACCAGGCGAGGTCCTTCCA...TGAGACCAGAAAGGCTAAGACCCATGCCCCAGGCACCACACCCATCTCTTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR CCA 90 bp GGCCACCAAGGCTCAGGCTGCTCCTCGTGGATGGAGGTGGCCCCAGAAAGGGCCTCCCTGAAAATACACTaGTGTTTCAGACACAGTCAC +
Preference number: 2 (lower is better)
Translates to: GHQGSGCSSWMEVAPERASLKIH*CFRHSH
Trigger: GTGACTGTGTCTGAAACACCAGTGTATTTTCAGGGA...GGCCCTTTCTGGGGCCACCTCCATCCACGAGGAGCAGCCTGAGCCTTGGTGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR CCA 90 bp GGGTGTCAGGATGGGCCCCCGCGGCTCCTGAAGTGGAACATGGGGGAAGAGTGGATTTCAGCAACACTGTaGTTGTTGTTAGGGGCAGGA +
Preference number: 2 (lower is better)
Translates to: GCQDGPPRLLKWNMGEEWISATL*LLLGAG
Trigger: TCCTGCCCCTAACAACAACCACAGTGTTGCTGAAAT...CCACTCTTCCCCCATGTTCCACTTCAGGAGCCGCGGGGGCCCATCCTGACACCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR CCA 90 bp TTGCATTTTCTCCTGACCACGGCGAAGTCTCAACTCTGTCTACTTTCACAGCTGCCCCGGGTGTCAGGATaGGCCCCCGCGGCTCCTGAA +
Preference number: 2 (lower is better)
Translates to: LHFLLTTAKSQLCLLSQLPRVSG*APAAPE
Trigger: TTCAGGAGCCGCGGGGGCCCATCCTGACACCCGGGG...CAGCTGTGAAAGTAGACAGAGTTGAGACTTCGCCGTGGTCAGGAGAAAATGCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR TCA 90 bp GGGCAGGAAGGAGGCGGTCCTGCAGAATACAGCGTGCTGGGGGCAGAGGCCAGTGTTAGGGACATTCCCTaGAAATACACTGGTGTTTCA +
Preference number: 2 (lower is better)
Translates to: GQEGGGPAEYSVLGAEASVRDIP*KYTGVS
Trigger: TGAAACACCAGTGTATTTTCAGGGAATGTCCCTAAC...ACTGGCCTCTGCCCCCAGCACGCTGTATTCTGCAGGACCGCCTCCTTCCTGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR TCA 90 bp AGCACACTACAGGGGCTCTTGGGACAGCCTCACTGGACTCAGGGTGGACAGGTAAATAAGATGGAGAGCTaGGGTGACATGCAGCTGGGG +
Preference number: 2 (lower is better)
Translates to: STLQGLLGQPHWTQGGQVNKMES*GDMQLG
Trigger: CCCCAGCTGCATGTCACCTCAGCTCTCCATCTTATT...TACCTGTCCACCCTGAGTCCAGTGAGGCTGTCCCAAGAGCCCCTGTAGTGTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR GCA 90 bp GCCAGAGCTTCCTGCCCTTCAGCTGGAAGGAGCCGGAAGGAGCTGGAAGGAAGGACACAGTCACTTGGCTaGTCACTACTATCCAGAACC +
Preference number: 2 (lower is better)
Translates to: ARASCPSAGRSRKELEGRTQSLG*SLLSRT
Trigger: GGTTCTGGATAGTAGTGAGCAGCCAAGTGACTGTGT...CCTTCCTTCCAGCTCCTTCCGGCTCCTTCCAGCTGAAGGGCAGGAAGCTCTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR GCA 90 bp CCTCACTGGACTCAGGGTGGACAGGTAACGTACCTAAGAAACAAATCAACAAGCCAGCCCCGTTCCTGCTaGCCCCACAAGCGTGCACCC +
Preference number: 2 (lower is better)
Translates to: PHWTQGGQVTYLRNKSTSQPRSC*PHKRAP
Trigger: GGGTGCACGCTTGTGGGGGCAGCAGGAACGGGGCTG...GCTTGTTGATTTGTTTCTTAGGTACGTTACCTGTCCACCCTGAGTCCAGTGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR GCA 90 bp CCTCACTGGACTCAGGGTGGACAGGTAACGTACCTAAGAAACAAATCAACAAGCTGCAGCTGGGGTGGCTaGGCCACCCTGGGAAAGCCC +
Preference number: 2 (lower is better)
Translates to: PHWTQGGQVTYLRNKSTSCSWGG*ATLGKP
Trigger: GGGCTTTCCCAGGGTGGCGCAGCCACCCCAGCTGCA...GCTTGTTGATTTGTTTCTTAGGTACGTTACCTGTCCACCCTGAGTCCAGTGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR CCA 90 bp CTACAGGGGCTCTTGGGACAGCCTCACTGGACTCAGGGTGGACAGGTAACGTACCTCCTGAGGCAGTTTTaGACACACAGGAAGGAGAGG +
Preference number: 2 (lower is better)
Translates to: LQGLLGQPHWTQGGQVTYLLRQF*THRKER
Trigger: CCTCTCCTTCCTGTGTGTCCAAAACTGCCTCAGGAG...GTACGTTACCTGTCCACCCTGAGTCCAGTGAGGCTGTCCCAAGAGCCCCTGTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR CCA 90 bp TTGCATTTTCTCCTGACCACGGCGAAGTCTCAACTCTGTCTACTTTCACAGCTGCACAGGCGGCTTCGGTaGCTGGGCCTTTCCTGGGGC +
Preference number: 2 (lower is better)
Translates to: LHFLLTTAKSQLCLLSQLHRRLR*LGLSWG
Trigger: GCCCCAGGAAAGGCCCAGCCACCGAAGCCGCCTGTG...CAGCTGTGAAAGTAGACAGAGTTGAGACTTCGCCGTGGTCAGGAGAAAATGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR CCA 90 bp CACACTACAGGGGCTCTTGGGACAGCCTCACTGGACTCAGGGTGGACAGGTAACTCCTGCAGATTTGCCTaGATTTGCCCTTCCTGGGGT +
Preference number: 2 (lower is better)
Translates to: HTTGALGTASLDSGWTGNSCRFA*ICPSWG
Trigger: ACCCCAGGAAGGGCAAATCCAGGCAAATCTGCAGGA...GTTACCTGTCCACCCTGAGTCCAGTGAGGCTGTCCCAAGAGCCCCTGTAGTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR TCA 90 bp CCTCACTGGACTCAGGGTGGACAGGTAACGTACCTAAGAAACAAATCAACAAGCGCTGTCCCTTTCTGCTaGGGGGTCCCCGAGGAGAGG +
Preference number: 2 (lower is better)
Translates to: PHWTQGGQVTYLRNKSTSAVPFC*GVPEER
Trigger: CCTCTCCTCGGGGACCCCTCAGCAGAAAGGGACAGC...GCTTGTTGATTTGTTTCTTAGGTACGTTACCTGTCCACCCTGAGTCCAGTGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR GCA 90 bp TGTTTCAGACACAGTCACTTGGCTGCTCACTACTATCCAGAACCAAAAGATGTCAGTCGGAGCCGACGCTaGGGTCCCCACCCACGCCTG +
Preference number: 2 (lower is better)
Translates to: CFRHSHLAAHYYPEPKDVSRSRR*GPHPRL
Trigger: CAGGCGTGGGTGGGGACCGCAGCGTCGGCTCCGACT...GACATCTTTTGGTTCTGGATAGTAGTGAGCAGCCAAGTGACTGTGTCTGAAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR GCA 90 bp CCTCACTGGACTCAGGGTGGACAGGTAACGTACCTAAGAAACAAATCAACAAGCCGACAGCCCCGTTCCTaGTGCCCCCACAAGCGTGCA +
Preference number: 2 (lower is better)
Translates to: PHWTQGGQVTYLRNKSTSRQPRS*CPHKRA
Trigger: TGCACGCTTGTGGGGGCAGCAGGAACGGGGCTGTCG...GCTTGTTGATTTGTTTCTTAGGTACGTTACCTGTCCACCCTGAGTCCAGTGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR CCA 90 bp TTTCACAGCTGCTTCTCCAGTGCAAGGAGGCTGCATGGGCTCCCTAGACAGGTGCTCCTGAGGCAGTTTTaGACACACAGGAAGGAGAGG +
Preference number: 2 (lower is better)
Translates to: FHSCFSSARRLHGLPRQVLLRQF*THRKER
Trigger: CCTCTCCTTCCTGTGTGTCCAAAACTGCCTCAGGAG...CACCTGTCTAGGGAGCCCATGCAGCCTCCTTGCACTGGAGAAGCAGCTGTGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR CCA 90 bp GCCAGAGCTTCCTGCCCTTCAGCTGGAAGGAGCCGGAAGGAGCTGGAAGGAAGGATTTCAGCAACACTGTaGTTGTTGTTAGGGGCAGGA +
Preference number: 2 (lower is better)
Translates to: ARASCPSAGRSRKELEGRISATL*LLLGAG
Trigger: TCCTGCCCCTAACAACAACCACAGTGTTGCTGAAAT...CCTTCCTTCCAGCTCCTTCCGGCTCCTTCCAGCTGAAGGGCAGGAAGCTCTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR CCA 90 bp GTGTCAGGATGGGCCCCCGCGGCTCCTGAAGTGGAACATGGGGGAAGAGTGGGGCTTAACTGCTTTTTCTaGGAGATGTTAGTAGGGGAA +
Preference number: 2 (lower is better)
Translates to: VSGWAPAAPEVEHGGRVGLNCFF*EMLVGE
Trigger: TTCCCCTACTAACATCTCCCAGAAAAAGCAGTTAAG...CCCCACTCTTCCCCCATGTTCCACTTCAGGAGCCGCGGGGGCCCATCCTGACAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 23 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR CCA 90 bp TCCATTAATACTGCTCGGAGAAGCACGATCTTACACGAAAAACACGGATGGGATCCCCGGGTGTCAGGATaGGCCCCCGCGGCTCCTGAA +
Preference number: 2 (lower is better)
Translates to: SINTARRSTILHEKHGWDPRVSG*APAAPE
Trigger: TTCAGGAGCCGCGGGGGCCCATCCTGACACCCGGGG...ATCCCATCCGTGTTTTTCGTGTAAGATCGTGCTTCTCCGAGCAGTATTAATGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR TCA 90 bp GAAGGTGGCCGTGGCAAGGGAGGAGCTGCTCCCATGGCAGAGCATTCCTGCAGAGTTAGGGACATTCCCTaGAAATACACTGGTGTTTCA +
Preference number: 2 (lower is better)
Translates to: EGGRGKGGAAPMAEHSCRVRDIP*KYTGVS
Trigger: TGAAACACCAGTGTATTTTCAGGGAATGTCCCTAAC...TCTGCAGGAATGCTCTGCCATGGGAGCAGCTCCTCCCTTGCCACGGCCACCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR TCA 90 bp TCCATTAATACTGCTCGGAGAAGCACGATCTTACACGAAAAACACGGATGGGATCTCGGCTTGCGTGGGTaGGGGCTCCCATTGGCCCAC +
Preference number: 2 (lower is better)
Translates to: SINTARRSTILHEKHGWDLGLRG*GLPLAH
Trigger: GTGGGCCAATGGGAGCCCTCACCCACGCAAGCCGAG...ATCCCATCCGTGTTTTTCGTGTAAGATCGTGCTTCTCCGAGCAGTATTAATGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR GCA 90 bp ATGGCAATAAGATGGAGAGCTGAGGTGACATGCAGCTGGGGTGGCTGCGCCACCATGGCAGAGCATTCCTaGAGATTTGCCTGGATTTGC +
Preference number: 2 (lower is better)
Translates to: MAIRWRAEVTCSWGGCATMAEHS*RFAWIC
Trigger: GCAAATCCAGGCAAATCTGCAGGAATGCTCTGCCAT...GGTGGCGCAGCCACCCCAGCTGCATGTCACCTCAGCTCTCCATCTTATTGCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR GCA 90 bp TTTCACAGCTGCTTCTCCAGTGCAAGGAGGCTGCATGGGCTCCCTAGACAGGTGAGTCTGTTCCCTGACTaGCACCGCCTAGAAAGGAAA +
Preference number: 2 (lower is better)
Translates to: FHSCFSSARRLHGLPRQVSLFPD*HRLERK
Trigger: TTTCCTTTCTAGGCGGTGGCAGTCAGGGAACAGACT...CACCTGTCTAGGGAGCCCATGCAGCCTCCTTGCACTGGAGAAGCAGCTGTGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR GCA 90 bp TCCATTAATACTGCTCGGAGAAGCACGATCTTACACGAAAAACACGGATGGGATTGGCGCACGCGGAAGTaGACGGCCTCCATGACCCGC +
Preference number: 2 (lower is better)
Translates to: SINTARRSTILHEKHGWDWRTRK*TASMTR
Trigger: GCGGGTCATGGAGGCCGTGCACTTCCGCGTGCGCCA...ATCCCATCCGTGTTTTTCGTGTAAGATCGTGCTTCTCCGAGCAGTATTAATGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000604074.5
3UTR-3UTR CCA 90 bp TGTTTCAGACACAGTCACTTGGCTGCTCACTACTATCCAGAACCAAAAGATGTCGGCGGCTTCGGTGGCTaGGCCTTTCCTGGGGCCTGT +
Preference number: 2 (lower is better)
Translates to: CFRHSHLAAHYYPEPKDVGGFGG*AFPGAC
Trigger: ACAGGCCCCAGGAAAGGCCCAGCCACCGAAGCCGCC...GACATCTTTTGGTTCTGGATAGTAGTGAGCAGCCAAGTGACTGTGTCTGAAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR CCA 90 bp ATGGCAATAAGATGGAGAGCTGAGGTGACATGCAGCTGGGGTGGCTGCGCCACCTCAGACACAGTCACTTaGCTGCTCACTACTATCCAG +
Preference number: 2 (lower is better)
Translates to: MAIRWRAEVTCSWGGCATSDTVT*LLTTIQ
Trigger: CTGGATAGTAGTGAGCAGCCAAGTGACTGTGTCTGA...GGTGGCGCAGCCACCCCAGCTGCATGTCACCTCAGCTCTCCATCTTATTGCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR CCA 90 bp CAGAGCGACTTGGACAGATGTGAGCTGACCTGCCTGGCGAGCTCCTTCTGCCTTTCAGACACAGTCACTTaGCTGCTCACTACTATCCAG +
Preference number: 2 (lower is better)
Translates to: QSDLDRCELTCLASSFCLSDTVT*LLTTIQ
Trigger: CTGGATAGTAGTGAGCAGCCAAGTGACTGTGTCTGA...AAGGCAGAAGGAGCTCGCCAGGCAGGTCAGCTCACATCTGTCCAAGTCGCTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR CCA 90 bp GCCAGAGCTTCCTGCCCTTCAGCTGGAAGGAGCCGGAAGGAGCTGGAAGGAAGGTCCCTGAAAATACACTaGTGTTTCAGACACAGTCAC +
Preference number: 2 (lower is better)
Translates to: ARASCPSAGRSRKELEGRSLKIH*CFRHSH
Trigger: GTGACTGTGTCTGAAACACCAGTGTATTTTCAGGGA...CCTTCCTTCCAGCTCCTTCCGGCTCCTTCCAGCTGAAGGGCAGGAAGCTCTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR CCA 90 bp CCTCACTGGACTCAGGGTGGACAGGTAACGTACCTAAGAAACAAATCAACAAGCAGCCTGCACTCTGGGTaGTGTCTCGGCTTGCGTGGG +
Preference number: 2 (lower is better)
Translates to: PHWTQGGQVTYLRNKSTSSLHSG*CLGLRG
Trigger: CCCACGCAAGCCGAGACACCACCCAGAGTGCAGGCT...GCTTGTTGATTTGTTTCTTAGGTACGTTACCTGTCCACCCTGAGTCCAGTGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR CCA 90 bp GCCCTTCCCAGGAGCACACTACAGGGGCTCTTGGGACAGCCTCACTGGACTCAGAAAATGGCAATAAGATaGAGAGCTGAGGTGACATGC +
Preference number: 2 (lower is better)
Translates to: ALPRSTLQGLLGQPHWTQKMAIR*RAEVTC
Trigger: GCATGTCACCTCAGCTCTCCATCTTATTGCCATTTT...CTGAGTCCAGTGAGGCTGTCCCAAGAGCCCCTGTAGTGTGCTCCTGGGAAGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR TCA 90 bp TCCATTAATACTGCTCGGAGAAGCACGATCTTACACGAAAAACACGGATGGGATGCTGTCCCTTTCTGCTaGGGGGTCCCCGAGGAGAGG +
Preference number: 2 (lower is better)
Translates to: SINTARRSTILHEKHGWDAVPFC*GVPEER
Trigger: CCTCTCCTCGGGGACCCCTCAGCAGAAAGGGACAGC...ATCCCATCCGTGTTTTTCGTGTAAGATCGTGCTTCTCCGAGCAGTATTAATGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR TCA 90 bp GCATTCCTGCAGATTTGCCTGGATTTGCCCTTCCTGGGGTTCCCTCTAGGCTTCTCATGGGCGCTAGGTTaGACTCCAAAGAGAATGCTG +
Preference number: 2 (lower is better)
Translates to: AFLQICLDLPFLGFPLGFSWALG*TPKRML
Trigger: CAGCATTCTCTTTGGAGTTCAACCTAGCGCCCATGA...GAAGCCTAGAGGGAACCCCAGGAAGGGCAAATCCAGGCAAATCTGCAGGAATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR GCA 90 bp TTGCATTTTCTCCTGACCACGGCGAAGTCTCAACTCTGTCTACTTTCACAGCTGCCTGCCCTGAAGCTGTaGTCCGGGACGGTCAAGGTT +
Preference number: 2 (lower is better)
Translates to: LHFLLTTAKSQLCLLSQLPALKL*SGTVKV
Trigger: AACCTTGACCGTCCCGGAGCACAGCTTCAGGGCAGG...CAGCTGTGAAAGTAGACAGAGTTGAGACTTCGCCGTGGTCAGGAGAAAATGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR GCA 90 bp TCCATTAATACTGCTCGGAGAAGCACGATCTTACACGAAAAACACGGATGGGATAGGGGCCAGGCAGCCTaGACTCTGGGTGGTGTCTCG +
Preference number: 2 (lower is better)
Translates to: SINTARRSTILHEKHGWDRGQAA*TLGGVS
Trigger: CGAGACACCACCCAGAGTGCAGGCTGCCTGGCCCCT...ATCCCATCCGTGTTTTTCGTGTAAGATCGTGCTTCTCCGAGCAGTATTAATGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR GCA 90 bp CTACAGGGGCTCTTGGGACAGCCTCACTGGACTCAGGGTGGACAGGTAACGTACCCTGAGGGGCTTAACTaGTTTTTCTGGGAGATGTTA +
Preference number: 2 (lower is better)
Translates to: LQGLLGQPHWTQGGQVTYPEGLN*FFWEML
Trigger: TAACATCTCCCAGAAAAAGCAGTTAAGCCCCTCAGG...GTACGTTACCTGTCCACCCTGAGTCCAGTGAGGCTGTCCCAAGAGCCCCTGTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR GCA 90 bp TCCATTAATACTGCTCGGAGAAGCACGATCTTACACGAAAAACACGGATGGGATCTGGGGCCATCTGGCTaGTCCGTGTTCTGGCCGGCT +
Preference number: 2 (lower is better)
Translates to: SINTARRSTILHEKHGWDLGPSG*SVFWPA
Trigger: AGCCGGCCAGAACACGGAGCAGCCAGATGGCCCCAG...ATCCCATCCGTGTTTTTCGTGTAAGATCGTGCTTCTCCGAGCAGTATTAATGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR CCA 90 bp AAAGATGTCGCAAAATACTTTTTGGCAGTCCATCAGCAAAGAGGATCCTTTCCTCACCCACGCCTGCCATaGAGCACGCCGGGGCAGTGG +
Preference number: 2 (lower is better)
Translates to: KDVAKYFLAVHQQRGSFPHPRLP*STPGQW
Trigger: CCACTGCCCCGGCGTGCTCCATGGCAGGCGTGGGTG...AGGAAAGGATCCTCTTTGCTGATGGACTGCCAAAAAGTATTTTGCGACATCTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR CCA 90 bp ATGGCAATAAGATGGAGAGCTGAGGTGACATGCAGCTGGGGTGGCTGCGCCACCATTTCAGCAACACTGTaGTTGTTGTTAGGGGCAGGA +
Preference number: 2 (lower is better)
Translates to: MAIRWRAEVTCSWGGCATISATL*LLLGAG
Trigger: TCCTGCCCCTAACAACAACCACAGTGTTGCTGAAAT...GGTGGCGCAGCCACCCCAGCTGCATGTCACCTCAGCTCTCCATCTTATTGCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR CCA 90 bp TCCATTAATACTGCTCGGAGAAGCACGATCTTACACGAAAAACACGGATGGGATTGCGGGTCGGGCTCCTaGGTACAGCAAGGGCTTCCC +
Preference number: 2 (lower is better)
Translates to: SINTARRSTILHEKHGWDCGSGS*VQQGLP
Trigger: GGGAAGCCCTTGCTGTACCCAGGAGCCCGACCCGCA...ATCCCATCCGTGTTTTTCGTGTAAGATCGTGCTTCTCCGAGCAGTATTAATGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR TCA 90 bp CTACAGGGGCTCTTGGGACAGCCTCACTGGACTCAGGGTGGACAGGTAACGTACGTTAGGGACATTCCCTaGAAATACACTGGTGTTTCA +
Preference number: 2 (lower is better)
Translates to: LQGLLGQPHWTQGGQVTYVRDIP*KYTGVS
Trigger: TGAAACACCAGTGTATTTTCAGGGAATGTCCCTAAC...GTACGTTACCTGTCCACCCTGAGTCCAGTGAGGCTGTCCCAAGAGCCCCTGTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR TCA 90 bp TTGCATTTTCTCCTGACCACGGCGAAGTCTCAACTCTGTCTACTTTCACAGCTGAGCAAGATGGAGTCCTaGTCTGGGGATGGGGGCTGT +
Preference number: 2 (lower is better)
Translates to: LHFLLTTAKSQLCLLSQLSKMES*SGDGGC
Trigger: ACAGCCCCCATCCCCAGATCAGGACTCCATCTTGCT...CAGCTGTGAAAGTAGACAGAGTTGAGACTTCGCCGTGGTCAGGAGAAAATGCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR GCA 90 bp GATCTTACACGAAAAACACGGATGGGATTTCGTTTTCACCTTAAAGCATTAAAGGCACCCAGGCGACTGTaGTGTCAGCGGCCCCCGGGG +
Preference number: 2 (lower is better)
Translates to: DLTRKTRMGFRFHLKALKAPRRL*CQRPPG
Trigger: CCCCGGGGGCCGCTGACAGCACAGTCGCCTGGGTGC...CTTTAATGCTTTAAGGTGAAAACGAAATCCCATCCGTGTTTTTCGTGTAAGATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR GCA 90 bp TCCATTAATACTGCTCGGAGAAGCACGATCTTACACGAAAAACACGGATGGGATGGCTCCCTAGACAGGTaGAGCTGGGGCCATCTGGCT +
Preference number: 2 (lower is better)
Translates to: SINTARRSTILHEKHGWDGSLDR*SWGHLA
Trigger: AGCCAGATGGCCCCAGCTGCACCTGTCTAGGGAGCC...ATCCCATCCGTGTTTTTCGTGTAAGATCGTGCTTCTCCGAGCAGTATTAATGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR CCA 90 bp TCAACAAGCCCTCTGGAACTGAAGCACATCTGCGCTGGGCTGAGGAACCCCGGGTCGCAAAATACTTTTTaGCAGTCCATCAGCAAAGAG +
Preference number: 2 (lower is better)
Translates to: STSPLELKHICAGLRNPGSQNTF*QSISKE
Trigger: CTCTTTGCTGATGGACTGCCAAAAAGTATTTTGCGA...CCCGGGGTTCCTCAGCCCAGCGCAGATGTGCTTCAGTTCCAGAGGGCTTGTTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR CCA 90 bp TCCATTAATACTGCTCGGAGAAGCACGATCTTACACGAAAAACACGGATGGGATCAGGCTGAGGGGCACTaGCTGAGGCGGTACCACATG +
Preference number: 2 (lower is better)
Translates to: SINTARRSTILHEKHGWDQAEGH*LRRYHM
Trigger: CATGTGGTACCGCCTCAGCCAGTGCCCCTCAGCCTG...ATCCCATCCGTGTTTTTCGTGTAAGATCGTGCTTCTCCGAGCAGTATTAATGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR CCA 90 bp TCCATTAATACTGCTCGGAGAAGCACGATCTTACACGAAAAACACGGATGGGATCCTCGTGGATGGAGGTaGCCCCAGAAAGGGCCTGTG +
Preference number: 2 (lower is better)
Translates to: SINTARRSTILHEKHGWDPRGWR*PQKGPV
Trigger: CACAGGCCCTTTCTGGGGCCACCTCCATCCACGAGG...ATCCCATCCGTGTTTTTCGTGTAAGATCGTGCTTCTCCGAGCAGTATTAATGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR CCA 90 bp CTACAGGGGCTCTTGGGACAGCCTCACTGGACTCAGGGTGGACAGGTAACGTACAAAATGGCAATAAGATaGAGAGCTGAGGTGACATGC +
Preference number: 2 (lower is better)
Translates to: LQGLLGQPHWTQGGQVTYKMAIR*RAEVTC
Trigger: GCATGTCACCTCAGCTCTCCATCTTATTGCCATTTT...GTACGTTACCTGTCCACCCTGAGTCCAGTGAGGCTGTCCCAAGAGCCCCTGTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR TCA 90 bp TTTCACAGCTGCTTCTCCAGTGCAAGGAGGCTGCATGGGCTCCCTAGACAGGTGGTTAGGGACATTCCCTaGAAATACACTGGTGTTTCA +
Preference number: 2 (lower is better)
Translates to: FHSCFSSARRLHGLPRQVVRDIP*KYTGVS
Trigger: TGAAACACCAGTGTATTTTCAGGGAATGTCCCTAAC...CACCTGTCTAGGGAGCCCATGCAGCCTCCTTGCACTGGAGAAGCAGCTGTGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR TCA 90 bp TTGCATTTTCTCCTGACCACGGCGAAGTCTCAACTCTGTCTACTTTCACAGCTGGAGAGTCGCTGTTTCTaGCCAGAGCGACTTGGACAG +
Preference number: 2 (lower is better)
Translates to: LHFLLTTAKSQLCLLSQLESRCF*PERLGQ
Trigger: CTGTCCAAGTCGCTCTGGTCAGAAACAGCGACTCTC...CAGCTGTGAAAGTAGACAGAGTTGAGACTTCGCCGTGGTCAGGAGAAAATGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR GCA 90 bp TGTTTCAGACACAGTCACTTGGCTGCTCACTACTATCCAGAACCAAAAGATGTCGGAAGGAGGCGGTCCTaGAGAATACAGCGTGCTGGG +
Preference number: 2 (lower is better)
Translates to: CFRHSHLAAHYYPEPKDVGRRRS*RIQRAG
Trigger: CCCAGCACGCTGTATTCTGCAGGACCGCCTCCTTCC...GACATCTTTTGGTTCTGGATAGTAGTGAGCAGCCAAGTGACTGTGTCTGAAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR GCA 90 bp TTGCATTTTCTCCTGACCACGGCGAAGTCTCAACTCTGTCTACTTTCACAGCTGGAGCTCCTTCTGCCTTaGCTCTCTGAGCAGACTCAG +
Preference number: 2 (lower is better)
Translates to: LHFLLTTAKSQLCLLSQLELLLP*LSEQTQ
Trigger: CTGAGTCTGCTCAGAGAGGCAAGGCAGAAGGAGCTC...CAGCTGTGAAAGTAGACAGAGTTGAGACTTCGCCGTGGTCAGGAGAAAATGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR GCA 90 bp TGTTTCAGACACAGTCACTTGGCTGCTCACTACTATCCAGAACCAAAAGATGTCCCCGCCAGATGGTCATaGGGTACTGCTCGGGGATCT +
Preference number: 2 (lower is better)
Translates to: CFRHSHLAAHYYPEPKDVPARWS*GTARGS
Trigger: AGATCCCCGAGCAGTACCGCATGACCATCTGGCGGG...GACATCTTTTGGTTCTGGATAGTAGTGAGCAGCCAAGTGACTGTGTCTGAAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000604074.5
3UTR-3UTR CCA 90 bp ATGGCAATAAGATGGAGAGCTGAGGTGACATGCAGCTGGGGTGGCTGCGCCACCTCGCAAAATACTTTTTaGCAGTCCATCAGCAAAGAG +
Preference number: 2 (lower is better)
Translates to: MAIRWRAEVTCSWGGCATSQNTF*QSISKE
Trigger: CTCTTTGCTGATGGACTGCCAAAAAGTATTTTGCGA...GGTGGCGCAGCCACCCCAGCTGCATGTCACCTCAGCTCTCCATCTTATTGCCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR CCA 90 bp CAGAGCGACTTGGACAGATGTGAGCTGACCTGCCTGGCGAGCTCCTTCTGCCTTTCGCAAAATACTTTTTaGCAGTCCATCAGCAAAGAG +
Preference number: 2 (lower is better)
Translates to: QSDLDRCELTCLASSFCLSQNTF*QSISKE
Trigger: CTCTTTGCTGATGGACTGCCAAAAAGTATTTTGCGA...AAGGCAGAAGGAGCTCGCCAGGCAGGTCAGCTCACATCTGTCCAAGTCGCTCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR CCA 90 bp TTTCACAGCTGCTTCTCCAGTGCAAGGAGGCTGCATGGGCTCCCTAGACAGGTGTCCCTGAAAATACACTaGTGTTTCAGACACAGTCAC +
Preference number: 2 (lower is better)
Translates to: FHSCFSSARRLHGLPRQVSLKIH*CFRHSH
Trigger: GTGACTGTGTCTGAAACACCAGTGTATTTTCAGGGA...CACCTGTCTAGGGAGCCCATGCAGCCTCCTTGCACTGGAGAAGCAGCTGTGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR CCA 90 bp TCCATTAATACTGCTCGGAGAAGCACGATCTTACACGAAAAACACGGATGGGATGGCCTACTAACTCCCTaGGGTGCTCCACGAAGGCCT +
Preference number: 2 (lower is better)
Translates to: SINTARRSTILHEKHGWDGLLTP*GAPRRP
Trigger: AGGCCTTCGTGGAGCACCCCAGGGAGTTAGTAGGCC...ATCCCATCCGTGTTTTTCGTGTAAGATCGTGCTTCTCCGAGCAGTATTAATGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR CCA 90 bp CACACTACAGGGGCTCTTGGGACAGCCTCACTGGACTCAGGGTGGACAGGTAACCTTAACTGCTTTTTCTaGGAGATGTTAGTAGGGGAA +
Preference number: 2 (lower is better)
Translates to: HTTGALGTASLDSGWTGNLNCFF*EMLVGE
Trigger: TTCCCCTACTAACATCTCCCAGAAAAAGCAGTTAAG...GTTACCTGTCCACCCTGAGTCCAGTGAGGCTGTCCCAAGAGCCCCTGTAGTGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR CCA 90 bp TTGCATTTTCTCCTGACCACGGCGAAGTCTCAACTCTGTCTACTTTCACAGCTGGTCCTGATCTGGGGATaGGGGCTGTGTCTAACCTTG +
Preference number: 2 (lower is better)
Translates to: LHFLLTTAKSQLCLLSQLVLIWG*GLCLTL
Trigger: CAAGGTTAGACACAGCCCCCATCCCCAGATCAGGAC...CAGCTGTGAAAGTAGACAGAGTTGAGACTTCGCCGTGGTCAGGAGAAAATGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR TCA 90 bp GATCTTACACGAAAAACACGGATGGGATTTCGTTTTCACCTTAAAGCATTAAAGTCCGGTTCCCTGCCCTaGAGCTGTGCTCCGGGACGG +
Preference number: 2 (lower is better)
Translates to: DLTRKTRMGFRFHLKALKSGSLP*SCAPGR
Trigger: CCGTCCCGGAGCACAGCTTCAGGGCAGGGAACCGGA...CTTTAATGCTTTAAGGTGAAAACGAAATCCCATCCGTGTTTTTCGTGTAAGATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR GCA 90 bp TCCATTAATACTGCTCGGAGAAGCACGATCTTACACGAAAAACACGGATGGGATCTCCAACCCCTGCACTaGTGGGAAAACCATCCGCCT +
Preference number: 2 (lower is better)
Translates to: SINTARRSTILHEKHGWDLQPLH*WENHPP
Trigger: AGGCGGATGGTTTTCCCAGCAGTGCAGGGGTTGGAG...ATCCCATCCGTGTTTTTCGTGTAAGATCGTGCTTCTCCGAGCAGTATTAATGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR CCA 90 bp TTGCATTTTCTCCTGACCACGGCGAAGTCTCAACTCTGTCTACTTTCACAGCTGGAGGATCCTTTCCTTTaGAAGGACCTCGCCTGGTTG +
Preference number: 2 (lower is better)
Translates to: LHFLLTTAKSQLCLLSQLEDPFL*KDLAWL
Trigger: CAACCAGGCGAGGTCCTTCCAAAGGAAAGGATCCTC...CAGCTGTGAAAGTAGACAGAGTTGAGACTTCGCCGTGGTCAGGAGAAAATGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR TCA 90 bp TGTTTCAGACACAGTCACTTGGCTGCTCACTACTATCCAGAACCAAAAGATGTCGAAGGTCCTGCCTCCTaGGGCAGTTTTGGACACACA +
Preference number: 2 (lower is better)
Translates to: CFRHSHLAAHYYPEPKDVEGPAS*GSFGHT
Trigger: TGTGTGTCCAAAACTGCCTCAGGAGGCAGGACCTTC...GACATCTTTTGGTTCTGGATAGTAGTGAGCAGCCAAGTGACTGTGTCTGAAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR TCA 90 bp GATCTTACACGAAAAACACGGATGGGATTTCGTTTTCACCTTAAAGCATTAAAGCCCACCTGCCTGCAATaGAGGGCCTCGTCACACCCG +
Preference number: 2 (lower is better)
Translates to: DLTRKTRMGFRFHLKALKPTCLQ*RASSHP
Trigger: CGGGTGTGACGAGGCCCTTCATTGCAGGCAGGTGGG...CTTTAATGCTTTAAGGTGAAAACGAAATCCCATCCGTGTTTTTCGTGTAAGATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR GCA 90 bp TTGCATTTTCTCCTGACCACGGCGAAGTCTCAACTCTGTCTACTTTCACAGCTGGTCTACTTTCACAGCTaGTTCTCCAGTGCAAGGAGG +
Preference number: 2 (lower is better)
Translates to: LHFLLTTAKSQLCLLSQLVYFHS*FSSARR
Trigger: CCTCCTTGCACTGGAGAAGCAGCTGTGAAAGTAGAC...CAGCTGTGAAAGTAGACAGAGTTGAGACTTCGCCGTGGTCAGGAGAAAATGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR CCA 90 bp GGAAGGACCTCGCCTGGTTGGGAGATGACAGTCTCTAGGATGAAGCCTGGAAGTTCGCAAAATACTTTTTaGCAGTCCATCAGCAAAGAG +
Preference number: 2 (lower is better)
Translates to: GRTSPGWEMTVSRMKPGSSQNTF*QSISKE
Trigger: CTCTTTGCTGATGGACTGCCAAAAAGTATTTTGCGA...ACTTCCAGGCTTCATCCTAGAGACTGTCATCTCCCAACCAGGCGAGGTCCTTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR CCA 90 bp TCCATTAATACTGCTCGGAGAAGCACGATCTTACACGAAAAACACGGATGGGATGTCCTGATCTGGGGATaGGGGCTGTGTCTAACCTTG +
Preference number: 2 (lower is better)
Translates to: SINTARRSTILHEKHGWDVLIWG*GLCLTL
Trigger: CAAGGTTAGACACAGCCCCCATCCCCAGATCAGGAC...ATCCCATCCGTGTTTTTCGTGTAAGATCGTGCTTCTCCGAGCAGTATTAATGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR CCA 90 bp GATCTTACACGAAAAACACGGATGGGATTTCGTTTTCACCTTAAAGCATTAAAGGGAGCCGGAAGGAGCTaGAAGGAAGGGCCAGGCCCT +
Preference number: 2 (lower is better)
Translates to: DLTRKTRMGFRFHLKALKGAGRS*KEGPGP
Trigger: AGGGCCTGGCCCTTCCTTCCAGCTCCTTCCGGCTCC...CTTTAATGCTTTAAGGTGAAAACGAAATCCCATCCGTGTTTTTCGTGTAAGATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR CCA 90 bp TTGCATTTTCTCCTGACCACGGCGAAGTCTCAACTCTGTCTACTTTCACAGCTGTCACTGGACTCAGGGTaGACAGGTAACGTACCTAAG +
Preference number: 2 (lower is better)
Translates to: LHFLLTTAKSQLCLLSQLSLDSG*TGNVPK
Trigger: CTTAGGTACGTTACCTGTCCACCCTGAGTCCAGTGA...CAGCTGTGAAAGTAGACAGAGTTGAGACTTCGCCGTGGTCAGGAGAAAATGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR CCA 90 bp GATCTTACACGAAAAACACGGATGGGATTTCGTTTTCACCTTAAAGCATTAAAGGCAGGCCCCGCCAGATaGTCATGCGGTACTGCTCGG +
Preference number: 2 (lower is better)
Translates to: DLTRKTRMGFRFHLKALKAGPAR*SCGTAR
Trigger: CCGAGCAGTACCGCATGACCATCTGGCGGGGCCTGC...CTTTAATGCTTTAAGGTGAAAACGAAATCCCATCCGTGTTTTTCGTGTAAGATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000604074.5
3UTR-3UTR TCA 90 bp GATCTTACACGAAAAACACGGATGGGATTTCGTTTTCACCTTAAAGCATTAAAGCTGAGGGGCACTGGCTaGGGCGGTACCACATGCTTC +
Preference number: 2 (lower is better)
Translates to: DLTRKTRMGFRFHLKALKLRGTG*GGTTCF
Trigger: GAAGCATGTGGTACCGCCTCAGCCAGTGCCCCTCAG...CTTTAATGCTTTAAGGTGAAAACGAAATCCCATCCGTGTTTTTCGTGTAAGATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR GCA 90 bp CCTCACTGGACTCAGGGTGGACAGGTAACGTACCTAAGAAACAAATCAACAAGCATGGCAGAGCATTCCTaGAGATTTGCCTGGATTTGC +
Preference number: 2 (lower is better)
Translates to: PHWTQGGQVTYLRNKSTSMAEHS*RFAWIC
Trigger: GCAAATCCAGGCAAATCTGCAGGAATGCTCTGCCAT...GCTTGTTGATTTGTTTCTTAGGTACGTTACCTGTCCACCCTGAGTCCAGTGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR TCA 90 bp GATCTTACACGAAAAACACGGATGGGATTTCGTTTTCACCTTAAAGCATTAAAGCAAGCCCTCTGGAACTaGAGCACATCTGCGCTGGGC +
Preference number: 2 (lower is better)
Translates to: DLTRKTRMGFRFHLKALKQALWN*STSALG
Trigger: GCCCAGCGCAGATGTGCTTCAGTTCCAGAGGGCTTG...CTTTAATGCTTTAAGGTGAAAACGAAATCCCATCCGTGTTTTTCGTGTAAGATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR GCA 90 bp TTGCATTTTCTCCTGACCACGGCGAAGTCTCAACTCTGTCTACTTTCACAGCTGCCTGAGGGGCTTAACTaGTTTTTCTGGGAGATGTTA +
Preference number: 2 (lower is better)
Translates to: LHFLLTTAKSQLCLLSQLPEGLN*FFWEML
Trigger: TAACATCTCCCAGAAAAAGCAGTTAAGCCCCTCAGG...CAGCTGTGAAAGTAGACAGAGTTGAGACTTCGCCGTGGTCAGGAGAAAATGCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR GCA 90 bp GATCTTACACGAAAAACACGGATGGGATTTCGTTTTCACCTTAAAGCATTAAAGCGTAGACCAGGTACCTaGGGCAACACCAGTCGCTGC +
Preference number: 2 (lower is better)
Translates to: DLTRKTRMGFRFHLKALKRRPGT*GNTSRC
Trigger: GCAGCGACTGGTGTTGCCGCAGGTACCTGGTCTACG...CTTTAATGCTTTAAGGTGAAAACGAAATCCCATCCGTGTTTTTCGTGTAAGATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR TCA 90 bp GATCTTACACGAAAAACACGGATGGGATTTCGTTTTCACCTTAAAGCATTAAAGCCTCAGTCTGTTCCCTaGCTGCCACCGCCTAGAAAG +
Preference number: 2 (lower is better)
Translates to: DLTRKTRMGFRFHLKALKPQSVP*LPPPRK
Trigger: CTTTCTAGGCGGTGGCAGTCAGGGAACAGACTGAGG...CTTTAATGCTTTAAGGTGAAAACGAAATCCCATCCGTGTTTTTCGTGTAAGATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR GCA 90 bp GATCTTACACGAAAAACACGGATGGGATTTCGTTTTCACCTTAAAGCATTAAAGACGGTGGGAGAGGGATaGCTGCGTCTTCGTAGACCA +
Preference number: 2 (lower is better)
Translates to: DLTRKTRMGFRFHLKALKTVGEG*LRLRRP
Trigger: TGGTCTACGAAGACGCAGGCATCCCTCTCCCACCGT...CTTTAATGCTTTAAGGTGAAAACGAAATCCCATCCGTGTTTTTCGTGTAAGATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR GCA 90 bp TCCATTAATACTGCTCGGAGAAGCACGATCTTACACGAAAAACACGGATGGGATCCTGAGGGGCTTAACTaGTTTTTCTGGGAGATGTTA +
Preference number: 2 (lower is better)
Translates to: SINTARRSTILHEKHGWDPEGLN*FFWEML
Trigger: TAACATCTCCCAGAAAAAGCAGTTAAGCCCCTCAGG...ATCCCATCCGTGTTTTTCGTGTAAGATCGTGCTTCTCCGAGCAGTATTAATGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR CCA 90 bp GATCTTACACGAAAAACACGGATGGGATTTCGTTTTCACCTTAAAGCATTAAAGTGGAAGGACCTCGCCTaGTTGGGAGATGACAGTCTC +
Preference number: 2 (lower is better)
Translates to: DLTRKTRMGFRFHLKALKWKDLA*LGDDSL
Trigger: GAGACTGTCATCTCCCAACCAGGCGAGGTCCTTCCA...CTTTAATGCTTTAAGGTGAAAACGAAATCCCATCCGTGTTTTTCGTGTAAGATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR CCA 90 bp TCCATTAATACTGCTCGGAGAAGCACGATCTTACACGAAAAACACGGATGGGATATTTCAGCAACACTGTaGTTGTTGTTAGGGGCAGGA +
Preference number: 2 (lower is better)
Translates to: SINTARRSTILHEKHGWDISATL*LLLGAG
Trigger: TCCTGCCCCTAACAACAACCACAGTGTTGCTGAAAT...ATCCCATCCGTGTTTTTCGTGTAAGATCGTGCTTCTCCGAGCAGTATTAATGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR CCA 90 bp GATCTTACACGAAAAACACGGATGGGATTTCGTTTTCACCTTAAAGCATTAAAGGAGGATCCTTTCCTTTaGAAGGACCTCGCCTGGTTG +
Preference number: 2 (lower is better)
Translates to: DLTRKTRMGFRFHLKALKEDPFL*KDLAWL
Trigger: CAACCAGGCGAGGTCCTTCCAAAGGAAAGGATCCTC...CTTTAATGCTTTAAGGTGAAAACGAAATCCCATCCGTGTTTTTCGTGTAAGATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR CCA 90 bp TCCATTAATACTGCTCGGAGAAGCACGATCTTACACGAAAAACACGGATGGGATTCCCTGAAAATACACTaGTGTTTCAGACACAGTCAC +
Preference number: 2 (lower is better)
Translates to: SINTARRSTILHEKHGWDSLKIH*CFRHSH
Trigger: GTGACTGTGTCTGAAACACCAGTGTATTTTCAGGGA...ATCCCATCCGTGTTTTTCGTGTAAGATCGTGCTTCTCCGAGCAGTATTAATGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR CCA 90 bp GATCTTACACGAAAAACACGGATGGGATTTCGTTTTCACCTTAAAGCATTAAAGCTGGTAACAGAGGAGTaGATGTTTGTGCGTTGGAGA +
Preference number: 2 (lower is better)
Translates to: DLTRKTRMGFRFHLKALKLVTEE*MFVRWR
Trigger: TCTCCAACGCACAAACATCCACTCCTCTGTTACCAG...CTTTAATGCTTTAAGGTGAAAACGAAATCCCATCCGTGTTTTTCGTGTAAGATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR TCA 72 bp CAGGGCCGCCGCCTGGGCCGCCGCGGTTGGGGATGGTaGTGGTGTGGCGCACGCGGAAGTGCACGGCCTCCA +
Preference number: 3 (lower is better)
Translates to: QGRRLGRRGWGW*WCGARGSARPP
Trigger: TGGAGGCCGTGCACTTCCGCGTGCGCCACACCATCACCATCCCCAACCGCGGCGGCCCAGGCGGCGGCCCTG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
3UTR CCA 72 bp CCGCCTGGGCCGCCGCGGTTGGGGATGGTGATGGTGTaGCGCACGCGGAAGTGCACGGCCTCCATGACCCGC +
Preference number: 3 (lower is better)
Translates to: PPGPPRLGMVMV*RTRKCTASMTR
Trigger: GCGGGTCATGGAGGCCGTGCACTTCCGCGTGCGCCACACCATCACCATCCCCAACCGCGGCGGCCCAGGCGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
3UTR-3UTR CAA 90 bp GGCGGTGGCGCAGGCTGCAGCCAGGCGAGGCCCTCAGTGGATCTCGGCCTCCGTCCTGGGCCGCCGCGGTaGGGGATGGTGATGGTGTGG +
Preference number: 3 (lower is better)
Translates to: GGGAGCSQARPSVDLGLRPGPPR*GMVMVW
Trigger: CCACACCATCACCATCCCCAACCGCGGCGGCCCAGG...ACGGAGGCCGAGATCCACTGAGGGCCTCGCCTGGCTGCAGCCTGCGCCACCGCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
3UTR-3UTR CAA 90 bp CAAGCGTGCACCCAGGCGACTGTGCTGTCAGCGGCCCCCGGGGAGGTGGACGGTGGGATGGGCCGGACCTaGCCTTTCCCCGGGCACAGC +
Preference number: 3 (lower is better)
Translates to: QACTQATVLSAAPGEVDGGMGRT*PFPGHS
Trigger: GCTGTGCCCGGGGAAAGGCAAGGTCCGGCCCATCCC...ACCGTCCACCTCCCCGGGGGCCGCTGACAGCACAGTCGCCTGGGTGCACGCTTG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR CAA 90 bp TGCGCTGGGCTGAGGAACCCCGGGTGTCAGGATGGGCCCCCGCGGCTCCTGAAGGGGATGGGCCGGACCTaGCCTTTCCCCGGGCACAGC +
Preference number: 3 (lower is better)
Translates to: CAGLRNPGCQDGPPRLLKGMGRT*PFPGHS
Trigger: GCTGTGCCCGGGGAAAGGCAAGGTCCGGCCCATCCC...CTTCAGGAGCCGCGGGGGCCCATCCTGACACCCGGGGTTCCTCAGCCCAGCGCA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR CAA 90 bp GGCTGCTTGCGGGCCTTGCAGTCGGGCAGGTCGAAGCCGAAGTCCGCCCACTCGCCTGGGCCGCCGCGGTaGGGGATGGTGATGGTGTGG +
Preference number: 3 (lower is better)
Translates to: GCLRALQSGRSKPKSAHSPGPPR*GMVMVW
Trigger: CCACACCATCACCATCCCCAACCGCGGCGGCCCAGG...CGAGTGGGCGGACTTCGGCTTCGACCTGCCCGACTGCAAGGCCCGCAAGCAGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
3UTR-3UTR CAA 90 bp GATGGGCTGCTTGCGGGCCTTGCAGTCGGGCAGGTCGAAGCCGAAGTCCGCCCAGGGATGGGCCGGACCTaGCCTTTCCCCGGGCACAGC +
Preference number: 3 (lower is better)
Translates to: DGLLAGLAVGQVEAEVRPGMGRT*PFPGHS
Trigger: GCTGTGCCCGGGGAAAGGCAAGGTCCGGCCCATCCC...TGGGCGGACTTCGGCTTCGACCTGCCCGACTGCAAGGCCCGCAAGCAGCCCATC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
3UTR-3UTR CAA 90 bp GCTCCGGTTCCCTGCCCTGAAGCTGTGCTCCGGGACGGTCAAGGTTCGGCCACCCCTGGGCCGCCGCGGTaGGGGATGGTGATGGTGTGG +
Preference number: 3 (lower is better)
Translates to: APVPCPEAVLRDGQGSATPGPPR*GMVMVW
Trigger: CCACACCATCACCATCCCCAACCGCGGCGGCCCAGG...GGTGGCCGAACCTTGACCGTCCCGGAGCACAGCTTCAGGGCAGGGAACCGGAGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000604074.5
3UTR-3UTR CAA 90 bp CTTGGGTCTCTGGGCGGTGGCGCAGGCTGCAGCCAGGCGAGGCCCTCAGTGGATGGCTGCTTGCGGGCCTaGCAGTCGGGCAGGTCGAAG +
Preference number: 3 (lower is better)
Translates to: LGSLGGGAGCSQARPSVDGCLRA*QSGRSK
Trigger: CTTCGACCTGCCCGACTGCAAGGCCCGCAAGCAGCC...ATCCACTGAGGGCCTCGCCTGGCTGCAGCCTGCGCCACCGCCCAGAGACCCAAG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
3UTR GCA 72 bp GGCCAGGCAGCCTGCACTCTGGGTGGTGTCTCGGCTTaGGTGGGTGAGGGCTCCCATTGGCCCACCTGCCTG +
Preference number: 3 (lower is better)
Translates to: GQAACTLGGVSA*VGEGSHWPTCL
Trigger: CAGGCAGGTGGGCCAATGGGAGCCCTCACCCACGCAAGCCGAGACACCACCCAGAGTGCAGGCTGCCTGGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR GCA 72 bp ACGCGGAAGTGCACGGCCTCCATGACCCGCTGGCGCTaGAGTTCCCCTGAGCCGCCGATGGAGATGGTGGCC +
Preference number: 3 (lower is better)
Translates to: TRKCTASMTRWR*SSPEPPMEMVA
Trigger: GGCCACCATCTCCATCGGCGGCTCAGGGGAACTGCAGCGCCAGCGGGTCATGGAGGCCGTGCACTTCCGCGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
3UTR CCA 72 bp TGGCGCACGCGGAAGTGCACGGCCTCCATGACCCGCTaGCGCTGCAGTTCCCCTGAGCCGCCGATGGAGATG +
Preference number: 3 (lower is better)
Translates to: WRTRKCTASMTR*RCSSPEPPMEM
Trigger: CATCTCCATCGGCGGCTCAGGGGAACTGCAGCGCCAGCGGGTCATGGAGGCCGTGCACTTCCGCGTGCGCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
3UTR-3UTR CAA 90 bp ATGGTGATGGTGTGGCGCACGCGGAAGTGCACGGCCTCCATGACCCGCTGGCGCGAGATGGTGGCCGCGTaGCTAGAGCGGAGCAGCTGC +
Preference number: 3 (lower is better)
Translates to: MVMVWRTRKCTASMTRWREMVAA*LERSSC
Trigger: GCAGCTGCTCCGCTCTAGCAACGCGGCCACCATCTC...GCGCCAGCGGGTCATGGAGGCCGTGCACTTCCGCGTGCGCCACACCATCACCAT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
3UTR TCA 72 bp CACGGCCTCCATGACCCGCTGGCGCTGCAGTTCCCCTaGGCCGCCGATGGAGATGGTGGCCGCGTTGCTAGA +
Preference number: 3 (lower is better)
Translates to: HGLHDPLALQFP*AADGDGGRVAR
Trigger: TCTAGCAACGCGGCCACCATCTCCATCGGCGGCTCAGGGGAACTGCAGCGCCAGCGGGTCATGGAGGCCGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
3UTR GCA 72 bp GTCTCTAGGATGAAGCCTGGAAGTCGGAGCCGACGCTaGGGTCCCCACCCACGCCTGCCATGGAGCACGCCG +
Preference number: 3 (lower is better)
Translates to: VSRMKPGSRSRR*GPHPRLPWSTP
Trigger: CGGCGTGCTCCATGGCAGGCGTGGGTGGGGACCGCAGCGTCGGCTCCGACTTCCAGGCTTCATCCTAGAGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR GCA 72 bp CCGGGACGGTCAAGGTTCGGCCACCAAGGCTCAGGCTaGTCCTCGTGGATGGAGGTGGCCCCAGAAAGGGCC +
Preference number: 3 (lower is better)
Translates to: PGRSRFGHQGSG*SSWMEVAPERA
Trigger: GGCCCTTTCTGGGGCCACCTCCATCCACGAGGAGCAGCCTGAGCCTTGGTGGCCGAACCTTGACCGTCCCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR GCA 72 bp CTTGCGTGGGTGAGGGCTCCCATTGGCCCACCTGCCTaGAATGAAGGGCCTCGTCACACCCGTGAGGCCCCC +
Preference number: 3 (lower is better)
Translates to: LAWVRAPIGPPA*NEGPRHTREAP
Trigger: GGGGGCCTCACGGGTGTGACGAGGCCCTTCATTGCAGGCAGGTGGGCCAATGGGAGCCCTCACCCACGCAAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR GCA 72 bp TGTGGAGCTGGCCGTGCCAGAAGGGGCCAGGCAGCCTaGACTCTGGGTGGTGTCTCGGCTTGCGTGGGTGAG +
Preference number: 3 (lower is better)
Translates to: CGAGRARRGQAA*TLGGVSACVGE
Trigger: CTCACCCACGCAAGCCGAGACACCACCCAGAGTGCAGGCTGCCTGGCCCCTTCTGGCACGGCCAGCTCCACA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR GCA 72 bp CGGTTGGGGATGGTGATGGTGTGGCGCACGCGGAAGTaGACGGCCTCCATGACCCGCTGGCGCTGCAGTTCC +
Preference number: 3 (lower is better)
Translates to: RLGMVMVWRTRK*TASMTRWRCSS
Trigger: GGAACTGCAGCGCCAGCGGGTCATGGAGGCCGTGCACTTCCGCGTGCGCCACACCATCACCATCCCCAACCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
3UTR CCA 72 bp CGTGGCCCTGCTTCAGGTCCTGCAGGCCCCGCCAGATaGTCATGCGGTACTGCTCGGGGATCTTCAGGGCCC +
Preference number: 3 (lower is better)
Translates to: RGPASGPAGPAR*SCGTARGSSGP
Trigger: GGGCCCTGAAGATCCCCGAGCAGTACCGCATGACCATCTGGCGGGGCCTGCAGGACCTGAAGCAGGGCCACG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378280.5
3UTR-3UTR CAA 90 bp GCCCTTCCCAGGAGCACACTACAGGGGCTCTTGGGACAGCCTCACTGGACTCAGGGGATGGGCCGGACCTaGCCTTTCCCCGGGCACAGC +
Preference number: 3 (lower is better)
Translates to: ALPRSTLQGLLGQPHWTQGMGRT*PFPGHS
Trigger: GCTGTGCCCGGGGAAAGGCAAGGTCCGGCCCATCCC...CTGAGTCCAGTGAGGCTGTCCCAAGAGCCCCTGTAGTGTGCTCCTGGGAAGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR CAA 90 bp GGACGGTGGGAGAGGGATGCCTGCGTCTTCGTAGACCAGGTACCTGCGGCAACAGGGATGGGCCGGACCTaGCCTTTCCCCGGGCACAGC +
Preference number: 3 (lower is better)
Translates to: GRWERDACVFVDQVPAATGMGRT*PFPGHS
Trigger: GCTGTGCCCGGGGAAAGGCAAGGTCCGGCCCATCCC...TGTTGCCGCAGGTACCTGGTCTACGAAGACGCAGGCATCCCTCTCCCACCGTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR CAA 90 bp CTGGAAGTCGGAGCCGACGCTGCGGTCCCCACCCACGCCTGCCATGGAGCACGCCCTCCTGAGGCAGTTTaGGACACACAGGAAGGAGAG +
Preference number: 3 (lower is better)
Translates to: LEVGADAAVPTHACHGARPPEAV*DTQEGE
Trigger: CTCTCCTTCCTGTGTGTCCAAAACTGCCTCAGGAGG...GCGTGCTCCATGGCAGGCGTGGGTGGGGACCGCAGCGTCGGCTCCGACTTCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR CAA 90 bp GCCTTGCAGTCGGGCAGGTCGAAGCCGAAGTCCGCCCACTCGTCAGGGCCGCCGCCTCCTGAGGCAGTTTaGGACACACAGGAAGGAGAG +
Preference number: 3 (lower is better)
Translates to: ALQSGRSKPKSAHSSGPPPPEAV*DTQEGE
Trigger: CTCTCCTTCCTGTGTGTCCAAAACTGCCTCAGGAGG...CGGCGGCCCTGACGAGTGGGCGGACTTCGGCTTCGACCTGCCCGACTGCAAGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
3UTR-3UTR CAA 90 bp GAAGGTGGCCGTGGCAAGGGAGGAGCTGCTCCCATGGCAGAGCATTCCTGCAGAGGCTGCTTGCGGGCCTaGCAGTCGGGCAGGTCGAAG +
Preference number: 3 (lower is better)
Translates to: EGGRGKGGAAPMAEHSCRGCLRA*QSGRSK
Trigger: CTTCGACCTGCCCGACTGCAAGGCCCGCAAGCAGCC...TCTGCAGGAATGCTCTGCCATGGGAGCAGCTCCTCCCTTGCCACGGCCACCTTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604074.5
3UTR GCA 72 bp AGGGGCAGGAAGGAGGCGGTCCTGCAGAATACAGCGTaGTGGGGGCAGAGGCCAGTCCCAAGTCCAGCAGAG +
Preference number: 3 (lower is better)
Translates to: RGRKEAVLQNTA*WGQRPVPSPAE
Trigger: CTCTGCTGGACTTGGGACTGGCCTCTGCCCCCAGCACGCTGTATTCTGCAGGACCGCCTCCTTCCTGCCCCT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR GCA 72 bp CCAGTGCAAGGAGGCTGCATGGGCTCCCTAGACAGGTaGAGCTGGGGCCATCTGGCTGCTCCGTGTTCTGGC +
Preference number: 3 (lower is better)
Translates to: PVQGGCMGSLDR*SWGHLAAPCSG
Trigger: GCCAGAACACGGAGCAGCCAGATGGCCCCAGCTGCACCTGTCTAGGGAGCCCATGCAGCCTCCTTGCACTGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR GCA 72 bp TGGATCTCGGCCTCCGTGAACTCCTCCTTGATGGGCTaGTTGCGGGCCTTGCAGTCGGGCAGGTCGAAGCCG +
Preference number: 3 (lower is better)
Translates to: WISASVNSSLMG*LRALQSGRSKP
Trigger: CGGCTTCGACCTGCCCGACTGCAAGGCCCGCAAGCAGCCCATCAAGGAGGAGTTCACGGAGGCCGAGATCCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
3UTR CCA 72 bp GCCACCAAGGCTCAGGCTGCTCCTCGTGGATGGAGGTaGCCCCAGAAAGGGCCTGTGCAGACTCTGTCTCCC +
Preference number: 3 (lower is better)
Translates to: ATKAQAAPRGWR*PQKGPVQTLSP
Trigger: GGGAGACAGAGTCTGCACAGGCCCTTTCTGGGGCCACCTCCATCCACGAGGAGCAGCCTGAGCCTTGGTGGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR CCA 72 bp CAGGTGCAGCTGGGGCCATCTGGCTGCTCCGTGTTCTaGCCGGCTTCCTTGGACATCTGGCTGGGGTTCCAG +
Preference number: 3 (lower is better)
Translates to: QVQLGPSGCSVF*PASLDIWLGFQ
Trigger: CTGGAACCCCAGCCAGATGTCCAAGGAAGCCGGCCAGAACACGGAGCAGCCAGATGGCCCCAGCTGCACCTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR CAA 90 bp TGCGCTGGGCTGAGGAACCCCGGGTGTCAGGATGGGCCCCCGCGGCTCCTGAAGTCAGCAACACTGTGGTaGTTGTTAGGGGCAGGAAGG +
Preference number: 3 (lower is better)
Translates to: CAGLRNPGCQDGPPRLLKSATLW*LLGAGR
Trigger: CCTTCCTGCCCCTAACAACAACCACAGTGTTGCTGA...CTTCAGGAGCCGCGGGGGCCCATCCTGACACCCGGGGTTCCTCAGCCCAGCGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR CAA 90 bp GTGTCAGGATGGGCCCCCGCGGCTCCTGAAGTGGAACATGGGGGAAGAGTGGGGTTCTGGCCGGCTTCCTaGGACATCTGGCTGGGGTTC +
Preference number: 3 (lower is better)
Translates to: VSGWAPAAPEVEHGGRVGFWPAS*DIWLGF
Trigger: GAACCCCAGCCAGATGTCCAAGGAAGCCGGCCAGAA...CCCCACTCTTCCCCCATGTTCCACTTCAGGAGCCGCGGGGGCCCATCCTGACAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR CAA 90 bp GGCCTGGTGGGAACGCTGGGGGAATGGGGGAGAGTCGCTGTTTCTGACCAGAGCTCCGTGAACTCCTCCTaGATGGGCTGCTTGCGGGCC +
Preference number: 3 (lower is better)
Translates to: GLVGTLGEWGRVAVSDQSSVNSS*MGCLRA
Trigger: GGCCCGCAAGCAGCCCATCAAGGAGGAGTTCACGGA...GCTCTGGTCAGAAACAGCGACTCTCCCCCATTCCCCCAGCGTTCCCACCAGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000604074.5
3UTR TCA 72 bp AGCCTGCACTCTGGGTGGTGTCTCGGCTTGCGTGGGTaGGGGCTCCCATTGGCCCACCTGCCTGCAATGAAG +
Preference number: 3 (lower is better)
Translates to: SLHSGWCLGLRG*GLPLAHLPAMK
Trigger: CTTCATTGCAGGCAGGTGGGCCAATGGGAGCCCTCACCCACGCAAGCCGAGACACCACCCAGAGTGCAGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR CCA 72 bp GGCAGGAAGGAGGCGGTCCTGCAGAATACAGCGTGCTaGGGGCAGAGGCCAGTCCCAAGTCCAGCAGAGAGA +
Preference number: 3 (lower is better)
Translates to: GRKEAVLQNTAC*GQRPVPSPAER
Trigger: TCTCTCTGCTGGACTTGGGACTGGCCTCTGCCCCCAGCACGCTGTATTCTGCAGGACCGCCTCCTTCCTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR CAA 90 bp CAGCTGGGGCCATCTGGCTGCTCCGTGTTCTGGCCGGCTTCCTTGGACATCTGGGGGCTGTGTCTAACCTaGCTGTGCCCTGAGGGGCTT +
Preference number: 3 (lower is better)
Translates to: QLGPSGCSVFWPASLDIWGLCLT*LCPEGL
Trigger: AAGCCCCTCAGGGCACAGCAAGGTTAGACACAGCCC...CCAGATGTCCAAGGAAGCCGGCCAGAACACGGAGCAGCCAGATGGCCCCAGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR CAA 90 bp ACCTTGCCTTTCCCCGGGCACAGCCCGAAGGTCCTGCCTCCTGAGGCAGTTTTGTCCGTGAACTCCTCCTaGATGGGCTGCTTGCGGGCC +
Preference number: 3 (lower is better)
Translates to: TLPFPGHSPKVLPPEAVLSVNSS*MGCLRA
Trigger: GGCCCGCAAGCAGCCCATCAAGGAGGAGTTCACGGA...CAAAACTGCCTCAGGAGGCAGGACCTTCGGGCTGTGCCCGGGGAAAGGCAAGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
3UTR-3UTR CAA 90 bp GTGCTCCGGGACGGTCAAGGTTCGGCCACCAAGGCTCAGGCTGCTCCTCGTGGACCTCCTGAGGCAGTTTaGGACACACAGGAAGGAGAG +
Preference number: 3 (lower is better)
Translates to: VLRDGQGSATKAQAAPRGPPEAV*DTQEGE
Trigger: CTCTCCTTCCTGTGTGTCCAAAACTGCCTCAGGAGG...TCCACGAGGAGCAGCCTGAGCCTTGGTGGCCGAACCTTGACCGTCCCGGAGCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR CAA 90 bp GCATTCCTGCAGATTTGCCTGGATTTGCCCTTCCTGGGGTTCCCTCTAGGCTTCGGGATGGGCCGGACCTaGCCTTTCCCCGGGCACAGC +
Preference number: 3 (lower is better)
Translates to: AFLQICLDLPFLGFPLGFGMGRT*PFPGHS
Trigger: GCTGTGCCCGGGGAAAGGCAAGGTCCGGCCCATCCC...GAAGCCTAGAGGGAACCCCAGGAAGGGCAAATCCAGGCAAATCTGCAGGAATGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR CAA 90 bp GCTCCGGTTCCCTGCCCTGAAGCTGTGCTCCGGGACGGTCAAGGTTCGGCCACCAGAGGATCCTTTCCTTaGGAAGGACCTCGCCTGGTT +
Preference number: 3 (lower is better)
Translates to: APVPCPEAVLRDGQGSATRGSFP*EGPRLV
Trigger: AACCAGGCGAGGTCCTTCCAAAGGAAAGGATCCTCT...GGTGGCCGAACCTTGACCGTCCCGGAGCACAGCTTCAGGGCAGGGAACCGGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR CAA 90 bp GCAGAGAGAGTCCCCAGCCCCCGGCGCGGGCAAGACGCAGTTAGGGACATTCCCTCAGCAACACTGTGGTaGTTGTTAGGGGCAGGAAGG +
Preference number: 3 (lower is better)
Translates to: AERVPSPRRGQDAVRDIPSATLW*LLGAGR
Trigger: CCTTCCTGCCCCTAACAACAACCACAGTGTTGCTGA...GGGAATGTCCCTAACTGCGTCTTGCCCGCGCCGGGGGCTGGGGACTCTCTCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR CAA 90 bp CTTCAGGAGGTGGCCTCGGGTAGCAGGTGCCCAGCCCCCAAGAGATGGGTGTGGCAGATTTGCCTGGATTaGCCCTTCCTGGGGTTCCCT +
Preference number: 3 (lower is better)
Translates to: LQEVASGSRCPAPKRWVWQICLD*PFLGFP
Trigger: AGGGAACCCCAGGAAGGGCAAATCCAGGCAAATCTG...CCACACCCATCTCTTGGGGGCTGGGCACCTGCTACCCGAGGCCACCTCCTGAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR GCA 72 bp GGACCTTGCCTTTCCCCGGGCACAGCCCGAAGGTCCTaGCTCCTGAGGCAGTTTTGGACACACAGGAAGGAG +
Preference number: 3 (lower is better)
Translates to: GPCLSPGTARRS*LLRQFWTHRKE
Trigger: CTCCTTCCTGTGTGTCCAAAACTGCCTCAGGAGGCAGGACCTTCGGGCTGTGCCCGGGGAAAGGCAAGGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000346387.8
ENST00000354437.8
ENST00000357733.7
ENST00000378280.5
ENST00000378285.5
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR CCA 72 bp GCAGGTGCCCAGCCCCCAAGAGATGGGTGTGGTGCCTaGGGCATGGGTCTTAGCCTTTCTGGTCTCAGCTTC +
Preference number: 3 (lower is better)
Translates to: AGAQPPRDGCGA*GMGLSLSGLSF
Trigger: GAAGCTGAGACCAGAAAGGCTAAGACCCATGCCCCAGGCACCACACCCATCTCTTGGGGGCTGGGCACCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR CCA 72 bp ATCAACAAGCCCTCTGGAACTGAAGCACATCTGCGCTaGGCTGAGGAACCCCGGGTGTCAGGATGGGCCCCC +
Preference number: 3 (lower is better)
Translates to: INKPSGTEAHLR*AEEPRVSGWAP
Trigger: GGGGGCCCATCCTGACACCCGGGGTTCCTCAGCCCAGCGCAGATGTGCTTCAGTTCCAGAGGGCTTGTTGAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR CAA 90 bp CTTCAGGAGGTGGCCTCGGGTAGCAGGTGCCCAGCCCCCAAGAGATGGGTGTGGAGAGGATCCTTTCCTTaGGAAGGACCTCGCCTGGTT +
Preference number: 3 (lower is better)
Translates to: LQEVASGSRCPAPKRWVWRGSFP*EGPRLV
Trigger: AACCAGGCGAGGTCCTTCCAAAGGAAAGGATCCTCT...CCACACCCATCTCTTGGGGGCTGGGCACCTGCTACCCGAGGCCACCTCCTGAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR CAA 90 bp TCGGGTAGCAGGTGCCCAGCCCCCAAGAGATGGGTGTGGTGCCTGGGGCATGGGCTCATGGGCGCTAGGTaGAACTCCAAAGAGAATGCT +
Preference number: 3 (lower is better)
Translates to: SGSRCPAPKRWVWCLGHGLMGAR*NSKENA
Trigger: AGCATTCTCTTTGGAGTTCAACCTAGCGCCCATGAG...CCCATGCCCCAGGCACCACACCCATCTCTTGGGGGCTGGGCACCTGCTACCCGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR CAA 90 bp TTTCACAGCTGCTTCTCCAGTGCAAGGAGGCTGCATGGGCTCCCTAGACAGGTGTCCTTGATGGGCTGCTaGCGGGCCTTGCAGTCGGGC +
Preference number: 3 (lower is better)
Translates to: FHSCFSSARRLHGLPRQVSLMGC*RALQSG
Trigger: GCCCGACTGCAAGGCCCGCAAGCAGCCCATCAAGGA...CACCTGTCTAGGGAGCCCATGCAGCCTCCTTGCACTGGAGAAGCAGCTGTGAAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604074.5
3UTR CCA 72 bp ATGGCAATAAGATGGAGAGCTGAGGTGACATGCAGCTaGGGTGGCTGCGCCACCCTGGGAAAGCCCCGAGTC +
Preference number: 3 (lower is better)
Translates to: MAIRWRAEVTCS*GGCATLGKPRV
Trigger: GACTCGGGGCTTTCCCAGGGTGGCGCAGCCACCCCAGCTGCATGTCACCTCAGCTCTCCATCTTATTGCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR CAA 90 bp GCCAGAGCTTCCTGCCCTTCAGCTGGAAGGAGCCGGAAGGAGCTGGAAGGAAGGCCTCCTGAGGCAGTTTaGGACACACAGGAAGGAGAG +
Preference number: 3 (lower is better)
Translates to: ARASCPSAGRSRKELEGRPPEAV*DTQEGE
Trigger: CTCTCCTTCCTGTGTGTCCAAAACTGCCTCAGGAGG...CCTTCCTTCCAGCTCCTTCCGGCTCCTTCCAGCTGAAGGGCAGGAAGCTCTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR CAA 90 bp GGCCTGGTGGGAACGCTGGGGGAATGGGGGAGAGTCGCTGTTTCTGACCAGAGCTCAGCAACACTGTGGTaGTTGTTAGGGGCAGGAAGG +
Preference number: 3 (lower is better)
Translates to: GLVGTLGEWGRVAVSDQSSATLW*LLGAGR
Trigger: CCTTCCTGCCCCTAACAACAACCACAGTGTTGCTGA...GCTCTGGTCAGAAACAGCGACTCTCCCCCATTCCCCCAGCGTTCCCACCAGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR CAA 90 bp GGACGGTGGGAGAGGGATGCCTGCGTCTTCGTAGACCAGGTACCTGCGGCAACACAGATTTGCCTGGATTaGCCCTTCCTGGGGTTCCCT +
Preference number: 3 (lower is better)
Translates to: GRWERDACVFVDQVPAATQICLD*PFLGFP
Trigger: AGGGAACCCCAGGAAGGGCAAATCCAGGCAAATCTG...TGTTGCCGCAGGTACCTGGTCTACGAAGACGCAGGCATCCCTCTCCCACCGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR CAA 90 bp AGCACACTACAGGGGCTCTTGGGACAGCCTCACTGGACTCAGGGTGGACAGGTAGGGCTGTGTCTAACCTaGCTGTGCCCTGAGGGGCTT +
Preference number: 3 (lower is better)
Translates to: STLQGLLGQPHWTQGGQVGLCLT*LCPEGL
Trigger: AAGCCCCTCAGGGCACAGCAAGGTTAGACACAGCCC...TACCTGTCCACCCTGAGTCCAGTGAGGCTGTCCCAAGAGCCCCTGTAGTGTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR GCA 72 bp GGCAAGGGAGGAGCTGCTCCCATGGCAGAGCATTCCTaGAGATTTGCCTGGATTTGCCCTTCCTGGGGTTCC +
Preference number: 3 (lower is better)
Translates to: GKGGAAPMAEHS*RFAWICPSWGS
Trigger: GGAACCCCAGGAAGGGCAAATCCAGGCAAATCTGCAGGAATGCTCTGCCATGGGAGCAGCTCCTCCCTTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR GCA 72 bp TCTGACCAGAGCGACTTGGACAGATGTGAGCTGACCTaGCTGGCGAGCTCCTTCTGCCTTGCCTCTCTGAGC +
Preference number: 3 (lower is better)
Translates to: SDQSDLDRCELT*LASSFCLASLS
Trigger: GCTCAGAGAGGCAAGGCAGAAGGAGCTCGCCAGGCAGGTCAGCTCACATCTGTCCAAGTCGCTCTGGTCAGA
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR CAA 90 bp GGCCACCAAGGCTCAGGCTGCTCCTCGTGGATGGAGGTGGCCCCAGAAAGGGCCGTCGCAAAATACTTTTaGGCAGTCCATCAGCAAAGA +
Preference number: 3 (lower is better)
Translates to: GHQGSGCSSWMEVAPERAVAKYF*AVHQQR
Trigger: TCTTTGCTGATGGACTGCCAAAAAGTATTTTGCGAC...GGCCCTTTCTGGGGCCACCTCCATCCACGAGGAGCAGCCTGAGCCTTGGTGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR CAA 90 bp GGACGGTGGGAGAGGGATGCCTGCGTCTTCGTAGACCAGGTACCTGCGGCAACACTCATGGGCGCTAGGTaGAACTCCAAAGAGAATGCT +
Preference number: 3 (lower is better)
Translates to: GRWERDACVFVDQVPAATLMGAR*NSKENA
Trigger: AGCATTCTCTTTGGAGTTCAACCTAGCGCCCATGAG...TGTTGCCGCAGGTACCTGGTCTACGAAGACGCAGGCATCCCTCTCCCACCGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR CAA 90 bp CAGAGCGACTTGGACAGATGTGAGCTGACCTGCCTGGCGAGCTCCTTCTGCCTTCAGATTTGCCTGGATTaGCCCTTCCTGGGGTTCCCT +
Preference number: 3 (lower is better)
Translates to: QSDLDRCELTCLASSFCLQICLD*PFLGFP
Trigger: AGGGAACCCCAGGAAGGGCAAATCCAGGCAAATCTG...AAGGCAGAAGGAGCTCGCCAGGCAGGTCAGCTCACATCTGTCCAAGTCGCTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR TCA 72 bp CTGTTTCTGACCAGAGCGACTTGGACAGATGTGAGCTaGCCTGCCTGGCGAGCTCCTTCTGCCTTGCCTCTC +
Preference number: 3 (lower is better)
Translates to: LFLTRATWTDVS*PAWRAPSALPL
Trigger: GAGAGGCAAGGCAGAAGGAGCTCGCCAGGCAGGTCAGCTCACATCTGTCCAAGTCGCTCTGGTCAGAAACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR GCA 72 bp CACCGCCTAGAAAGGAAAGCAATGCCCTGTGGACCTTaGAGTGCTAGAGAAGGTGGCCGTGGCAAGGGAGGA +
Preference number: 3 (lower is better)
Translates to: HRLERKAMPCGP*SAREGGRGKGG
Trigger: TCCTCCCTTGCCACGGCCACCTTCTCTAGCACTGCAAGGTCCACAGGGCATTGCTTTCCTTTCTAGGCGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR GCA 72 bp TCTACTTTCACAGCTGCTTCTCCAGTGCAAGGAGGCTaGATGGGCTCCCTAGACAGGTGCAGCTGGGGCCAT +
Preference number: 3 (lower is better)
Translates to: STFTAASPVQGG*MGSLDRCSWGH
Trigger: ATGGCCCCAGCTGCACCTGTCTAGGGAGCCCATGCAGCCTCCTTGCACTGGAGAAGCAGCTGTGAAAGTAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR CCA 72 bp TGTGCGTTGGAGACACTGACTGTTCTGAGTGACAAGTaGCTCTGTGCCAGGATACTGCGGGTCGGGCTCCTG +
Preference number: 3 (lower is better)
Translates to: CALETLTVLSDK*LCARILRVGLL
Trigger: CAGGAGCCCGACCCGCAGTATCCTGGCACAGAGCCACTTGTCACTCAGAACAGTCAGTGTCTCCAACGCACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR CAA 90 bp GGGCAGGAAGGAGGCGGTCCTGCAGAATACAGCGTGCTGGGGGCAGAGGCCAGTGTCGCAAAATACTTTTaGGCAGTCCATCAGCAAAGA +
Preference number: 3 (lower is better)
Translates to: GQEGGGPAEYSVLGAEASVAKYF*AVHQQR
Trigger: TCTTTGCTGATGGACTGCCAAAAAGTATTTTGCGAC...ACTGGCCTCTGCCCCCAGCACGCTGTATTCTGCAGGACCGCCTCCTTCCTGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR GCA 72 bp AACAAATCAACAAGCCCTCTGGAACTGAAGCACATCTaGGCTGGGCTGAGGAACCCCGGGTGTCAGGATGGG +
Preference number: 3 (lower is better)
Translates to: NKSTSPLELKHI*AGLRNPGCQDG
Trigger: CCCATCCTGACACCCGGGGTTCCTCAGCCCAGCGCAGATGTGCTTCAGTTCCAGAGGGCTTGTTGATTTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR CAA 90 bp GGAAGGACCTCGCCTGGTTGGGAGATGACAGTCTCTAGGATGAAGCCTGGAAGTCCTCCTGAGGCAGTTTaGGACACACAGGAAGGAGAG +
Preference number: 3 (lower is better)
Translates to: GRTSPGWEMTVSRMKPGSPPEAV*DTQEGE
Trigger: CTCTCCTTCCTGTGTGTCCAAAACTGCCTCAGGAGG...ACTTCCAGGCTTCATCCTAGAGACTGTCATCTCCCAACCAGGCGAGGTCCTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR TCA 72 bp GGATGTTTGTGCGTTGGAGACACTGACTGTTCTGAGTaGCAAGTGGCTCTGTGCCAGGATACTGCGGGTCGG +
Preference number: 3 (lower is better)
Translates to: GCLCVGDTDCSE*QVALCQDTAGR
Trigger: CCGACCCGCAGTATCCTGGCACAGAGCCACTTGTCACTCAGAACAGTCAGTGTCTCCAACGCACAAACATCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR CCA 72 bp AGGAGCACACTACAGGGGCTCTTGGGACAGCCTCACTaGACTCAGGGTGGACAGGTAACGTACCTAAGAAAC +
Preference number: 3 (lower is better)
Translates to: RSTLQGLLGQPH*TQGGQVTYLRN
Trigger: GTTTCTTAGGTACGTTACCTGTCCACCCTGAGTCCAGTGAGGCTGTCCCAAGAGCCCCTGTAGTGTGCTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR CAA 90 bp TCAACAAGCCCTCTGGAACTGAAGCACATCTGCGCTGGGCTGAGGAACCCCGGGGTCGCAAAATACTTTTaGGCAGTCCATCAGCAAAGA +
Preference number: 3 (lower is better)
Translates to: STSPLELKHICAGLRNPGVAKYF*AVHQQR
Trigger: TCTTTGCTGATGGACTGCCAAAAAGTATTTTGCGAC...CCCGGGGTTCCTCAGCCCAGCGCAGATGTGCTTCAGTTCCAGAGGGCTTGTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR CAA 90 bp GCATTCCTGCAGATTTGCCTGGATTTGCCCTTCCTGGGGTTCCCTCTAGGCTTCCTCATGGGCGCTAGGTaGAACTCCAAAGAGAATGCT +
Preference number: 3 (lower is better)
Translates to: AFLQICLDLPFLGFPLGFLMGAR*NSKENA
Trigger: AGCATTCTCTTTGGAGTTCAACCTAGCGCCCATGAG...GAAGCCTAGAGGGAACCCCAGGAAGGGCAAATCCAGGCAAATCTGCAGGAATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR CAA 90 bp TTGCATTTTCTCCTGACCACGGCGAAGTCTCAACTCTGTCTACTTTCACAGCTGGGGCTGTGTCTAACCTaGCTGTGCCCTGAGGGGCTT +
Preference number: 3 (lower is better)
Translates to: LHFLLTTAKSQLCLLSQLGLCLT*LCPEGL
Trigger: AAGCCCCTCAGGGCACAGCAAGGTTAGACACAGCCC...CAGCTGTGAAAGTAGACAGAGTTGAGACTTCGCCGTGGTCAGGAGAAAATGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR CAA 90 bp GGCCTGGTGGGAACGCTGGGGGAATGGGGGAGAGTCGCTGTTTCTGACCAGAGCTCACTTAAAGGATTCTaGTTCCTGGGAATTTGCATT +
Preference number: 3 (lower is better)
Translates to: GLVGTLGEWGRVAVSDQSSLKGF*FLGICI
Trigger: AATGCAAATTCCCAGGAACAAGAATCCTTTAAGTGA...GCTCTGGTCAGAAACAGCGACTCTCCCCCATTCCCCCAGCGTTCCCACCAGGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR CAA 90 bp TCCATTAATACTGCTCGGAGAAGCACGATCTTACACGAAAAACACGGATGGGATGAGATGGTGGCCGCGTaGCTAGAGCGGAGCAGCTGC +
Preference number: 3 (lower is better)
Translates to: SINTARRSTILHEKHGWDEMVAA*LERSSC
Trigger: GCAGCTGCTCCGCTCTAGCAACGCGGCCACCATCTC...ATCCCATCCGTGTTTTTCGTGTAAGATCGTGCTTCTCCGAGCAGTATTAATGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000604074.5
3UTR-3UTR CAA 90 bp CCTCACTGGACTCAGGGTGGACAGGTAACGTACCTAAGAAACAAATCAACAAGCCAGATTTGCCTGGATTaGCCCTTCCTGGGGTTCCCT +
Preference number: 3 (lower is better)
Translates to: PHWTQGGQVTYLRNKSTSQICLD*PFLGFP
Trigger: AGGGAACCCCAGGAAGGGCAAATCCAGGCAAATCTG...GCTTGTTGATTTGTTTCTTAGGTACGTTACCTGTCCACCCTGAGTCCAGTGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR CCA 72 bp AAGAGGATCCTTTCCTTTGGAAGGACCTCGCCTGGTTaGGAGATGACAGTCTCTAGGATGAAGCCTGGAAGT +
Preference number: 3 (lower is better)
Translates to: KRILSFGRTSPG*EMTVSRMKPGS
Trigger: ACTTCCAGGCTTCATCCTAGAGACTGTCATCTCCCAACCAGGCGAGGTCCTTCCAAAGGAAAGGATCCTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR CCA 72 bp TTTTGGCAGTCCATCAGCAAAGAGGATCCTTTCCTTTaGAAGGACCTCGCCTGGTTGGGAGATGACAGTCTC +
Preference number: 3 (lower is better)
Translates to: FWQSISKEDPFL*KDLAWLGDDSL
Trigger: GAGACTGTCATCTCCCAACCAGGCGAGGTCCTTCCAAAGGAAAGGATCCTCTTTGCTGATGGACTGCCAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR CAA 90 bp TTGCATTTTCTCCTGACCACGGCGAAGTCTCAACTCTGTCTACTTTCACAGCTGAGAGGATCCTTTCCTTaGGAAGGACCTCGCCTGGTT +
Preference number: 3 (lower is better)
Translates to: LHFLLTTAKSQLCLLSQLRGSFP*EGPRLV
Trigger: AACCAGGCGAGGTCCTTCCAAAGGAAAGGATCCTCT...CAGCTGTGAAAGTAGACAGAGTTGAGACTTCGCCGTGGTCAGGAGAAAATGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR CAA 90 bp TCCATTAATACTGCTCGGAGAAGCACGATCTTACACGAAAAACACGGATGGGATACACTACAGGGGCTCTaGGGACAGCCTCACTGGACT +
Preference number: 3 (lower is better)
Translates to: SINTARRSTILHEKHGWDTLQGL*GQPHWT
Trigger: AGTCCAGTGAGGCTGTCCCAAGAGCCCCTGTAGTGT...ATCCCATCCGTGTTTTTCGTGTAAGATCGTGCTTCTCCGAGCAGTATTAATGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR CAA 90 bp TTGCATTTTCTCCTGACCACGGCGAAGTCTCAACTCTGTCTACTTTCACAGCTGCTCATGGGCGCTAGGTaGAACTCCAAAGAGAATGCT +
Preference number: 3 (lower is better)
Translates to: LHFLLTTAKSQLCLLSQLLMGAR*NSKENA
Trigger: AGCATTCTCTTTGGAGTTCAACCTAGCGCCCATGAG...CAGCTGTGAAAGTAGACAGAGTTGAGACTTCGCCGTGGTCAGGAGAAAATGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR CAA 90 bp TTTCACAGCTGCTTCTCCAGTGCAAGGAGGCTGCATGGGCTCCCTAGACAGGTGTCACTTAAAGGATTCTaGTTCCTGGGAATTTGCATT +
Preference number: 3 (lower is better)
Translates to: FHSCFSSARRLHGLPRQVSLKGF*FLGICI
Trigger: AATGCAAATTCCCAGGAACAAGAATCCTTTAAGTGA...CACCTGTCTAGGGAGCCCATGCAGCCTCCTTGCACTGGAGAAGCAGCTGTGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR CAA 90 bp TCCATTAATACTGCTCGGAGAAGCACGATCTTACACGAAAAACACGGATGGGATAGAGGATCCTTTCCTTaGGAAGGACCTCGCCTGGTT +
Preference number: 3 (lower is better)
Translates to: SINTARRSTILHEKHGWDRGSFP*EGPRLV
Trigger: AACCAGGCGAGGTCCTTCCAAAGGAAAGGATCCTCT...ATCCCATCCGTGTTTTTCGTGTAAGATCGTGCTTCTCCGAGCAGTATTAATGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR CAA 90 bp TTGCATTTTCTCCTGACCACGGCGAAGTCTCAACTCTGTCTACTTTCACAGCTGTTCAGACACAGTCACTaGGCTGCTCACTACTATCCA +
Preference number: 3 (lower is better)
Translates to: LHFLLTTAKSQLCLLSQLFRHSH*AAHYYP
Trigger: TGGATAGTAGTGAGCAGCCAAGTGACTGTGTCTGAA...CAGCTGTGAAAGTAGACAGAGTTGAGACTTCGCCGTGGTCAGGAGAAAATGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR CAA 90 bp CCTCACTGGACTCAGGGTGGACAGGTAACGTACCTAAGAAACAAATCAACAAGCTTCAGACACAGTCACTaGGCTGCTCACTACTATCCA +
Preference number: 3 (lower is better)
Translates to: PHWTQGGQVTYLRNKSTSFRHSH*AAHYYP
Trigger: TGGATAGTAGTGAGCAGCCAAGTGACTGTGTCTGAA...GCTTGTTGATTTGTTTCTTAGGTACGTTACCTGTCCACCCTGAGTCCAGTGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR CAA 90 bp TCCATTAATACTGCTCGGAGAAGCACGATCTTACACGAAAAACACGGATGGGATAGCATTCCTGCAGATTaGCCTGGATTTGCCCTTCCT +
Preference number: 3 (lower is better)
Translates to: SINTARRSTILHEKHGWDSIPAD*PGFALP
Trigger: AGGAAGGGCAAATCCAGGCAAATCTGCAGGAATGCT...ATCCCATCCGTGTTTTTCGTGTAAGATCGTGCTTCTCCGAGCAGTATTAATGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR-3UTR CAA 90 bp AAAGATGTCGCAAAATACTTTTTGGCAGTCCATCAGCAAAGAGGATCCTTTCCTTCAGCAACACTGTGGTaGTTGTTAGGGGCAGGAAGG +
Preference number: 3 (lower is better)
Translates to: KDVAKYFLAVHQQRGSFPSATLW*LLGAGR
Trigger: CCTTCCTGCCCCTAACAACAACCACAGTGTTGCTGA...AGGAAAGGATCCTCTTTGCTGATGGACTGCCAAAAAGTATTTTGCGACATCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp AGGGCCGCCGCCTGGGCCGCCGCGGTTGGGGATGGTGATGGTGTGGCGCACGCGTGGGCCGTGGCGAGGTaGCGTGCGGGGTCACCGACG +
Preference number: 4 (lower is better)
Translates to: RAAAWAAAVGDGDGVAHAWAVAR*RAGSPT
Trigger: CGTCGGTGACCCCGCACGGCACCTCGCCACGGCCCA...CGCGTGCGCCACACCATCACCATCCCCAACCGCGGCGGCCCAGGCGGCGGCCCT
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378280.5
ENST00000378285.5
CDS-3UTR CCA 90 bp GCGGTGGCGCAGGCTGCAGCCAGGCGAGGCCCTCAGTGGATCTCGGCCTCCGTGCAGGCATGGCCCGGATaGCGGTGCCTGGGGGTGGCG +
Preference number: 4 (lower is better)
Translates to: AVAQAAARRGPQWISASVQAWPG*RCLGVA
Trigger: CGCCACCCCCAGGCACCGCCATCCGGGCCATGCCTG...CACGGAGGCCGAGATCCACTGAGGGCCTCGCCTGGCTGCAGCCTGCGCCACCGC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR GCA 90 bp TCAGGGCCGCCGCCTGGGCCGCCGCGGTTGGGGATGGTGATGGTGTGGCGCACGATGACCCGCTGGCGCTaGAGTTCCCCTGAGCCGCCG +
Preference number: 4 (lower is better)
Translates to: SGPPPGPPRLGMVMVWRTMTRWR*SSPEPP
Trigger: CGGCGGCTCAGGGGAACTGCAGCGCCAGCGGGTCAT...CGTGCGCCACACCATCACCATCCCCAACCGCGGCGGCCCAGGCGGCGGCCCTGA
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR GCA 90 bp CCGCCGCCTGGGCCGCCGCGGTTGGGGATGGTGATGGTGTGGCGCACGCGGAAGTGGCGCACGCGGAAGTaGACGGCCTCCATGACCCGC +
Preference number: 4 (lower is better)
Translates to: PPPGPPRLGMVMVWRTRKWRTRK*TASMTR
Trigger: GCGGGTCATGGAGGCCGTGCACTTCCGCGTGCGCCA...CTTCCGCGTGCGCCACACCATCACCATCCCCAACCGCGGCGGCCCAGGCGGCGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR CCA 90 bp TCGGGCAGGTCGAAGCCGAAGTCCGCCCACTCGTCAGGGCCGCCGCCTGGGCCGAGTGGGTGGGCACGCTaGCGGCGTGCTCTGGGGTGT +
Preference number: 4 (lower is better)
Translates to: SGRSKPKSAHSSGPPPGPSGWAR*RRALGC
Trigger: ACACCCCAGAGCACGCCGCCAGCGTGCCCACCCACT...CGGCCCAGGCGGCGGCCCTGACGAGTGGGCGGACTTCGGCTTCGACCTGCCCGA
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR CCA 90 bp AGGGCCGCCGCCTGGGCCGCCGCGGTTGGGGATGGTGATGGTGTGGCGCACGCGCAGGCGCCGGCGACATaGTGTCGAAGGTGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: RAAAWAAAVGDGDGVAHAQAPAT*CRRWSW
Trigger: CCAGCTCCACCTTCGACACCATGTCGCCGGCGCCTG...CGCGTGCGCCACACCATCACCATCCCCAACCGCGGCGGCCCAGGCGGCGGCCCT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR CCA 90 bp CTGGAAGTCGGAGCCGACGCTGCGGTCCCCACCCACGCCTGCCATGGAGCACGCCCGGATGGCGGTGCCTaGGGGTGGCGGGGTGGACAC +
Preference number: 4 (lower is better)
Translates to: LEVGADAAVPTHACHGARPDGGA*GWRGGH
Trigger: GTGTCCACCCCGCCACCCCCAGGCACCGCCATCCGG...GCGTGCTCCATGGCAGGCGTGGGTGGGGACCGCAGCGTCGGCTCCGACTTCCAG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp GGCGGTGGCGCAGGCTGCAGCCAGGCGAGGCCCTCAGTGGATCTCGGCCTCCGTTGGGTCTCTGGGCGGTaGCGCAGGCTGCAGCCAGGC +
Preference number: 4 (lower is better)
Translates to: GGGAGCSQARPSVDLGLRWVSGR*RRLQPG
Trigger: GCCTGGCTGCAGCCTGCGCCACCGCCCAGAGACCCA...ACGGAGGCCGAGATCCACTGAGGGCCTCGCCTGGCTGCAGCCTGCGCCACCGCC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR CCA 90 bp CCGCCGCCTGGGCCGCCGCGGTTGGGGATGGTGATGGTGTGGCGCACGCGGAAGCACAGGCGGCTTCGGTaGCTGGGCCTTTCCTGGGGC +
Preference number: 4 (lower is better)
Translates to: PPPGPPRLGMVMVWRTRKHRRLR*LGLSWG
Trigger: GCCCCAGGAAAGGCCCAGCCACCGAAGCCGCCTGTG...CTTCCGCGTGCGCCACACCATCACCATCCCCAACCGCGGCGGCCCAGGCGGCGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR CCA 90 bp TCGGGCAGGTCGAAGCCGAAGTCCGCCCACTCGTCAGGGCCGCCGCCTGGGCCGCTGTGCGGGGGAGGCTaGCCCACCAGCTGGTTGACG +
Preference number: 4 (lower is better)
Translates to: SGRSKPKSAHSSGPPPGPLCGGG*PTSWLT
Trigger: CGTCAACCAGCTGGTGGGCCAGCCTCCCCCGCACAG...CGGCCCAGGCGGCGGCCCTGACGAGTGGGCGGACTTCGGCTTCGACCTGCCCGA
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354437.8
ENST00000378285.5
CDS-3UTR TCA 90 bp TCGGGCAGGTCGAAGCCGAAGTCCGCCCACTCGTCAGGGCCGCCGCCTGGGCCGGCGCTGCAGTTCCCCTaGGCCGCCGATGGAGATGGT +
Preference number: 4 (lower is better)
Translates to: SGRSKPKSAHSSGPPPGPALQFP*AADGDG
Trigger: ACCATCTCCATCGGCGGCTCAGGGGAACTGCAGCGC...CGGCCCAGGCGGCGGCCCTGACGAGTGGGCGGACTTCGGCTTCGACCTGCCCGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR GCA 90 bp CCGCCGCCTGGGCCGCCGCGGTTGGGGATGGTGATGGTGTGGCGCACGCGGAAGCAGGACAGGCGCAGATaGGGCCCTCAAAGGACCGGC +
Preference number: 4 (lower is better)
Translates to: PPPGPPRLGMVMVWRTRKQDRRR*GPQRTG
Trigger: GCCGGTCCTTTGAGGGCCGCATCTGCGCCTGTCCTG...CTTCCGCGTGCGCCACACCATCACCATCCCCAACCGCGGCGGCCCAGGCGGCGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR GCA 90 bp TCAGGGCCGCCGCCTGGGCCGCCGCGGTTGGGGATGGTGATGGTGTGGCGCACGCCCTGCTTCAGGTCCTaGAGGCCCCGCCAGATGGTC +
Preference number: 4 (lower is better)
Translates to: SGPPPGPPRLGMVMVWRTPCFRS*RPRQMV
Trigger: GACCATCTGGCGGGGCCTGCAGGACCTGAAGCAGGG...CGTGCGCCACACCATCACCATCCCCAACCGCGGCGGCCCAGGCGGCGGCCCTGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR GCA 90 bp TCGGGCAGGTCGAAGCCGAAGTCCGCCCACTCGTCAGGGCCGCCGCCTGGGCCGGCAGCTGCTGCGCGGTaGTGTAGTCGTGGCCCTGCT +
Preference number: 4 (lower is better)
Translates to: SGRSKPKSAHSSGPPPGPAAAAR*CSRGPA
Trigger: AGCAGGGCCACGACTACAGCACCGCGCAGCAGCTGC...CGGCCCAGGCGGCGGCCCTGACGAGTGGGCGGACTTCGGCTTCGACCTGCCCGA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR GCA 90 bp GGCTGCTTGCGGGCCTTGCAGTCGGGCAGGTCGAAGCCGAAGTCCGCCCACTCGGGCGGTGGCGCAGGCTaGAGCCAGGCGAGGCCCTCA +
Preference number: 4 (lower is better)
Translates to: GCLRALQSGRSKPKSAHSGGGAG*SQARPS
Trigger: TGAGGGCCTCGCCTGGCTGCAGCCTGCGCCACCGCC...CGAGTGGGCGGACTTCGGCTTCGACCTGCCCGACTGCAAGGCCCGCAAGCAGCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR GCA 90 bp GGGATGGGCCGGACCTTGCCTTTCCCCGGGCACAGCCCGAAGGTCCTGCCTCCTGGCGGTGGCGCAGGCTaGAGCCAGGCGAGGCCCTCA +
Preference number: 4 (lower is better)
Translates to: GMGRTLPFPGHSPKVLPPGGGAG*SQARPS
Trigger: TGAGGGCCTCGCCTGGCTGCAGCCTGCGCCACCGCC...AGGAGGCAGGACCTTCGGGCTGTGCCCGGGGAAAGGCAAGGTCCGGCCCATCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000346387.8
ENST00000354437.8
ENST00000357733.7
ENST00000378280.5
ENST00000378285.5
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp CTGGAAGTCGGAGCCGACGCTGCGGTCCCCACCCACGCCTGCCATGGAGCACGCAGTCGGAGCCGACGCTaGGGTCCCCACCCACGCCTG +
Preference number: 4 (lower is better)
Translates to: LEVGADAAVPTHACHGARSRSRR*GPHPRL
Trigger: CAGGCGTGGGTGGGGACCGCAGCGTCGGCTCCGACT...GCGTGCTCCATGGCAGGCGTGGGTGGGGACCGCAGCGTCGGCTCCGACTTCCAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp AGGGCCGCCGCCTGGGCCGCCGCGGTTGGGGATGGTGATGGTGTGGCGCACGCGCAGGTTGGGTGTAGCTaGCGAACTGTGCGGGGGAGG +
Preference number: 4 (lower is better)
Translates to: RAAAWAAAVGDGDGVAHAQVGCS*RTVRGR
Trigger: CCTCCCCCGCACAGTTCGGCAGCTACACCCAACCTG...CGCGTGCGCCACACCATCACCATCCCCAACCGCGGCGGCCCAGGCGGCGGCCCT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354437.8
ENST00000378285.5
CDS-3UTR GCA 90 bp CCGCCGCCTGGGCCGCCGCGGTTGGGGATGGTGATGGTGTGGCGCACGCGGAAGGGGCGCTGTGGCTGCTaGTCATCTCGCCGTTGGCTG +
Preference number: 4 (lower is better)
Translates to: PPPGPPRLGMVMVWRTRKGRCGC*SSRRWL
Trigger: CAGCCAACGGCGAGATGAGCAGCAGCCACAGCGCCC...CTTCCGCGTGCGCCACACCATCACCATCCCCAACCGCGGCGGCCCAGGCGGCGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
CDS-3UTR GCA 90 bp TCAGGGCCGCCGCCTGGGCCGCCGCGGTTGGGGATGGTGATGGTGTGGCGCACGGGGCGCTGTGGCTGCTaGTCATCTCGCCGTTGGCTG +
Preference number: 4 (lower is better)
Translates to: SGPPPGPPRLGMVMVWRTGRCGC*SSRRWL
Trigger: CAGCCAACGGCGAGATGAGCAGCAGCCACAGCGCCC...CGTGCGCCACACCATCACCATCCCCAACCGCGGCGGCCCAGGCGGCGGCCCTGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
CDS-3UTR GCA 90 bp GGGATGGGCCGGACCTTGCCTTTCCCCGGGCACAGCCCGAAGGTCCTGCCTCCTTGGGCCGTGGCGAGGTaGCGTGCGGGGTCACCGACG +
Preference number: 4 (lower is better)
Translates to: GMGRTLPFPGHSPKVLPPWAVAR*RAGSPT
Trigger: CGTCGGTGACCCCGCACGGCACCTCGCCACGGCCCA...AGGAGGCAGGACCTTCGGGCTGTGCCCGGGGAAAGGCAAGGTCCGGCCCATCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378280.5
ENST00000378285.5
ENST00000378288.8
CDS-3UTR CCA 90 bp CCGCCGCCTGGGCCGCCGCGGTTGGGGATGGTGATGGTGTGGCGCACGCGGAAGCCCCATCAGGGGAGGTaGCGGTGGACTGGGCCATCT +
Preference number: 4 (lower is better)
Translates to: PPPGPPRLGMVMVWRTRKPHQGR*RWTGPS
Trigger: AGATGGCCCAGTCCACCGCCACCTCCCCTGATGGGG...CTTCCGCGTGCGCCACACCATCACCATCCCCAACCGCGGCGGCCCAGGCGGCGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000354437.8
ENST00000604074.5
CDS-3UTR CCA 90 bp GCTGCTGCGCGGTGCTGTAGTCGTGGCCCTGCTTCAGGTCCTGCAGGCCCCGCCGCTGGCGGCGTGCTCTaGGGTGTAGGGGCTGGCCGA +
Preference number: 4 (lower is better)
Translates to: AAARCCSRGPASGPAGPAAGGVL*GVGAGR
Trigger: TCGGCCAGCCCCTACACCCCAGAGCACGCCGCCAGC...GGCGGGGCCTGCAGGACCTGAAGCAGGGCCACGACTACAGCACCGCGCAGCAGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR CCA 90 bp CAAGCGTGCACCCAGGCGACTGTGCTGTCAGCGGCCCCCGGGGAGGTGGACGGTGCTGGCGGCGTGCTCTaGGGTGTAGGGGCTGGCCGA +
Preference number: 4 (lower is better)
Translates to: QACTQATVLSAAPGEVDGAGGVL*GVGAGR
Trigger: TCGGCCAGCCCCTACACCCCAGAGCACGCCGCCAGC...ACCGTCCACCTCCCCGGGGGCCGCTGACAGCACAGTCGCCTGGGTGCACGCTTG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp CTTGGGTCTCTGGGCGGTGGCGCAGGCTGCAGCCAGGCGAGGCCCTCAGTGGATCCGGATGGCGGTGCCTaGGGGTGGCGGGGTGGACAC +
Preference number: 4 (lower is better)
Translates to: LGSLGGGAGCSQARPSVDPDGGA*GWRGGH
Trigger: GTGTCCACCCCGCCACCCCCAGGCACCGCCATCCGG...ATCCACTGAGGGCCTCGCCTGGCTGCAGCCTGCGCCACCGCCCAGAGACCCAAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR CCA 90 bp GATGGTGTGGCGCACGCGGAAGTGCACGGCCTCCATGACCCGCTGGCGCTGCAGCCGGATGGCGGTGCCTaGGGGTGGCGGGGTGGACAC +
Preference number: 4 (lower is better)
Translates to: DGVAHAEVHGLHDPLALQPDGGA*GWRGGH
Trigger: GTGTCCACCCCGCCACCCCCAGGCACCGCCATCCGG...CTGCAGCGCCAGCGGGTCATGGAGGCCGTGCACTTCCGCGTGCGCCACACCATC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR CCA 90 bp TCAGGGCCGCCGCCTGGGCCGCCGCGGTTGGGGATGGTGATGGTGTGGCGCACGTGGCGGCCCCGTTCTTaGCGGAGCTCTCGTTCAGGG +
Preference number: 4 (lower is better)
Translates to: SGPPPGPPRLGMVMVWRTWRPRS*RSSRSG
Trigger: CCCTGAACGAGAGCTCCGCCAAGAACGGGGCCGCCA...CGTGCGCCACACCATCACCATCCCCAACCGCGGCGGCCCAGGCGGCGGCCCTGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR CCA 90 bp CCGCCGCCTGGGCCGCCGCGGTTGGGGATGGTGATGGTGTGGCGCACGCGGAAGGCAGGCCCCGCCAGATaGTCATGCGGTACTGCTCGG +
Preference number: 4 (lower is better)
Translates to: PPPGPPRLGMVMVWRTRKAGPAR*SCGTAR
Trigger: CCGAGCAGTACCGCATGACCATCTGGCGGGGCCTGC...CTTCCGCGTGCGCCACACCATCACCATCCCCAACCGCGGCGGCCCAGGCGGCGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR CCA 90 bp GGCGGTGGCGCAGGCTGCAGCCAGGCGAGGCCCTCAGTGGATCTCGGCCTCCGTCCCCTGAGCCGCCGATaGAGATGGTGGCCGCGTTGC +
Preference number: 4 (lower is better)
Translates to: GGGAGCSQARPSVDLGLRPLSRR*RWWPRC
Trigger: GCAACGCGGCCACCATCTCCATCGGCGGCTCAGGGG...ACGGAGGCCGAGATCCACTGAGGGCCTCGCCTGGCTGCAGCCTGCGCCACCGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR CCA 90 bp CCGCCGCCTGGGCCGCCGCGGTTGGGGATGGTGATGGTGTGGCGCACGCGGAAGGCCTCCATGACCCGCTaGCGCTGCAGTTCCCCTGAG +
Preference number: 4 (lower is better)
Translates to: PPPGPPRLGMVMVWRTRKASMTR*RCSSPE
Trigger: CTCAGGGGAACTGCAGCGCCAGCGGGTCATGGAGGC...CTTCCGCGTGCGCCACACCATCACCATCCCCAACCGCGGCGGCCCAGGCGGCGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR CCA 90 bp GGCGGTGGCGCAGGCTGCAGCCAGGCGAGGCCCTCAGTGGATCTCGGCCTCCGTGGCAGCTTGGGTCTCTaGGCGGTGGCGCAGGCTGCA +
Preference number: 4 (lower is better)
Translates to: GGGAGCSQARPSVDLGLRGSLGL*AVAQAA
Trigger: TGCAGCCTGCGCCACCGCCCAGAGACCCAAGCTGCC...ACGGAGGCCGAGATCCACTGAGGGCCTCGCCTGGCTGCAGCCTGCGCCACCGCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR TCA 90 bp GCCTGGGCCGCCGCGGTTGGGGATGGTGATGGTGTGGCGCACGCGGAAGTGCACCTCGGCTTGCGTGGGTaGGGGCTCCCATTGGCCCAC +
Preference number: 4 (lower is better)
Translates to: AWAAAVGDGDGVAHAEVHLGLRG*GLPLAH
Trigger: GTGGGCCAATGGGAGCCCTCACCCACGCAAGCCGAG...GTGCACTTCCGCGTGCGCCACACCATCACCATCCCCAACCGCGGCGGCCCAGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000604074.5
CDS-3UTR TCA 90 bp CTGGAAGTCGGAGCCGACGCTGCGGTCCCCACCCACGCCTGCCATGGAGCACGCGCTGCCGCTACTGACTaGTGCCCTGGGCGTGGGCAC +
Preference number: 4 (lower is better)
Translates to: LEVGADAAVPTHACHGARAAATD*CPGRGH
Trigger: GTGCCCACGCCCAGGGCATCAGTCAGTAGCGGCAGC...GCGTGCTCCATGGCAGGCGTGGGTGGGGACCGCAGCGTCGGCTCCGACTTCCAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR TCA 90 bp GCTGCTGCGCGGTGCTGTAGTCGTGGCCCTGCTTCAGGTCCTGCAGGCCCCGCCCGTGGCCATGGTTGTTaGGCATCCCGGGGCCCACGG +
Preference number: 4 (lower is better)
Translates to: AAARCCSRGPASGPAGPARGHGC*ASRGPR
Trigger: CCGTGGGCCCCGGGATGCTCAACAACCATGGCCACG...GGCGGGGCCTGCAGGACCTGAAGCAGGGCCACGACTACAGCACCGCGCAGCAGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354437.8
ENST00000378285.5
CDS-3UTR TCA 90 bp CCTTGCAGTCGGGCAGGTCGAAGCCGAAGTCCGCCCACTCGTCAGGGCCGCCGCCGTGGCCATGGTTGTTaGGCATCCCGGGGCCCACGG +
Preference number: 4 (lower is better)
Translates to: PCSRAGRSRSPPTRQGRRRGHGC*ASRGPR
Trigger: CCGTGGGCCCCGGGATGCTCAACAACCATGGCCACG...GCGGCGGCCCTGACGAGTGGGCGGACTTCGGCTTCGACCTGCCCGACTGCAAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354437.8
ENST00000378285.5
CDS-3UTR GCA 90 bp TCGGGCAGGTCGAAGCCGAAGTCCGCCCACTCGTCAGGGCCGCCGCCTGGGCCGGGTGCTCAAACGTGGTaGCCCCATCAGGGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: SGRSKPKSAHSSGPPPGPGAQTW*PHQGRW
Trigger: CCACCTCCCCTGATGGGGGCACCACGTTTGAGCACC...CGGCCCAGGCGGCGGCCCTGACGAGTGGGCGGACTTCGGCTTCGACCTGCCCGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354437.8
ENST00000604074.5
CDS-3UTR GCA 90 bp TGCGCTGGGCTGAGGAACCCCGGGTGTCAGGATGGGCCCCCGCGGCTCCTGAAGCCGAGGCCGCGCGGCTaGTCATCTGGTCCATGGTGC +
Preference number: 4 (lower is better)
Translates to: CAGLRNPGCQDGPPRLLKPRPRG*SSGPWC
Trigger: GCACCATGGACCAGATGAGCAGCCGCGCGGCCTCGG...CTTCAGGAGCCGCGGGGGCCCATCCTGACACCCGGGGTTCCTCAGCCCAGCGCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp GGCGGTGGCGCAGGCTGCAGCCAGGCGAGGCCCTCAGTGGATCTCGGCCTCCGTGGCACCACGACGCTCTaGCTGCCGGTGACAGGGTCA +
Preference number: 4 (lower is better)
Translates to: GGGAGCSQARPSVDLGLRGTTTL*LPVTGS
Trigger: TGACCCTGTCACCGGCAGGCAGAGCGTCGTGGTGCC...ACGGAGGCCGAGATCCACTGAGGGCCTCGCCTGGCTGCAGCCTGCGCCACCGCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR GCA 90 bp AGGGCCGCCGCCTGGGCCGCCGCGGTTGGGGATGGTGATGGTGTGGCGCACGCGGAGTCCACCAGTGGCTaGGGCACCAACTCCATCAGC +
Preference number: 4 (lower is better)
Translates to: RAAAWAAAVGDGDGVAHAESTSG*GTNSIS
Trigger: GCTGATGGAGTTGGTGCCGCAGCCACTGGTGGACTC...CGCGTGCGCCACACCATCACCATCCCCAACCGCGGCGGCCCAGGCGGCGGCCCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR GCA 90 bp GTGGCGCACGCGGAAGTGCACGGCCTCCATGACCCGCTGGCGCTGCAGTTCCCCATGACCCGCTGGCGCTaGAGTTCCCCTGAGCCGCCG +
Preference number: 4 (lower is better)
Translates to: VAHAEVHGLHDPLALQFPMTRWR*SSPEPP
Trigger: CGGCGGCTCAGGGGAACTGCAGCGCCAGCGGGTCAT...GGGGAACTGCAGCGCCAGCGGGTCATGGAGGCCGTGCACTTCCGCGTGCGCCAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR GCA 90 bp GGCCACCAAGGCTCAGGCTGCTCCTCGTGGATGGAGGTGGCCCCAGAAAGGGCCGGCGGTGGCGCAGGCTaGAGCCAGGCGAGGCCCTCA +
Preference number: 4 (lower is better)
Translates to: GHQGSGCSSWMEVAPERAGGGAG*SQARPS
Trigger: TGAGGGCCTCGCCTGGCTGCAGCCTGCGCCACCGCC...GGCCCTTTCTGGGGCCACCTCCATCCACGAGGAGCAGCCTGAGCCTTGGTGGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp GCTGCTGCGCGGTGCTGTAGTCGTGGCCCTGCTTCAGGTCCTGCAGGCCCCGCCGGATGGGCCGGACCTTaGCTTTCCCCGGGCACAGCC +
Preference number: 4 (lower is better)
Translates to: AAARCCSRGPASGPAGPAGWAGP*LSPGTA
Trigger: GGCTGTGCCCGGGGAAAGGCAAGGTCCGGCCCATCC...GGCGGGGCCTGCAGGACCTGAAGCAGGGCCACGACTACAGCACCGCGCAGCAGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR GCA 90 bp TCGGGTAGCAGGTGCCCAGCCCCCAAGAGATGGGTGTGGTGCCTGGGGCATGGGGTCCCCACCCACGCCTaGCATGGAGCACGCCGGGGC +
Preference number: 4 (lower is better)
Translates to: SGSRCPAPKRWVWCLGHGVPTHA*HGARRG
Trigger: GCCCCGGCGTGCTCCATGGCAGGCGTGGGTGGGGAC...CCCATGCCCCAGGCACCACACCCATCTCTTGGGGGCTGGGCACCTGCTACCCGA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp GCAGAGAGAGTCCCCAGCCCCCGGCGCGGGCAAGACGCAGTTAGGGACATTCCCGCACCCAGGCGACTGTaGTGTCAGCGGCCCCCGGGG +
Preference number: 4 (lower is better)
Translates to: AERVPSPRRGQDAVRDIPAPRRL*CQRPPG
Trigger: CCCCGGGGGCCGCTGACAGCACAGTCGCCTGGGTGC...GGGAATGTCCCTAACTGCGTCTTGCCCGCGCCGGGGGCTGGGGACTCTCTCTGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp CAAGCGTGCACCCAGGCGACTGTGCTGTCAGCGGCCCCCGGGGAGGTGGACGGTTGCAGCTGGGGTGGCTaGGCCACCCTGGGAAAGCCC +
Preference number: 4 (lower is better)
Translates to: QACTQATVLSAAPGEVDGCSWGG*ATLGKP
Trigger: GGGCTTTCCCAGGGTGGCGCAGCCACCCCAGCTGCA...ACCGTCCACCTCCCCGGGGGCCGCTGACAGCACAGTCGCCTGGGTGCACGCTTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp GCTGCTGCGCGGTGCTGTAGTCGTGGCCCTGCTTCAGGTCCTGCAGGCCCCGCCTGCAGCTGGGGTGGCTaGGCCACCCTGGGAAAGCCC +
Preference number: 4 (lower is better)
Translates to: AAARCCSRGPASGPAGPACSWGG*ATLGKP
Trigger: GGGCTTTCCCAGGGTGGCGCAGCCACCCCAGCTGCA...GGCGGGGCCTGCAGGACCTGAAGCAGGGCCACGACTACAGCACCGCGCAGCAGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000604074.5
CDS-3UTR GCA 90 bp CTGGAAGTCGGAGCCGACGCTGCGGTCCCCACCCACGCCTGCCATGGAGCACGCGGCAGGAGCCGAGGATaGTGGGGAACATGCGGGCCG +
Preference number: 4 (lower is better)
Translates to: LEVGADAAVPTHACHGARGRSRG*WGTCGP
Trigger: CGGCCCGCATGTTCCCCAGCATCCTCGGCTCCTGCC...GCGTGCTCCATGGCAGGCGTGGGTGGGGACCGCAGCGTCGGCTCCGACTTCCAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378288.8
CDS-3UTR GCA 90 bp CCTTGCAGTCGGGCAGGTCGAAGCCGAAGTCCGCCCACTCGTCAGGGCCGCCGCCGTGGCGAGGTGCCGTaGGGGGTCACCGACGTACAG +
Preference number: 4 (lower is better)
Translates to: PCSRAGRSRSPPTRQGRRRGEVP*GVTDVQ
Trigger: CTGTACGTCGGTGACCCCGCACGGCACCTCGCCACG...GCGGCGGCCCTGACGAGTGGGCGGACTTCGGCTTCGACCTGCCCGACTGCAAGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378280.5
ENST00000378285.5
CDS-3UTR GCA 90 bp GCTCCGGTTCCCTGCCCTGAAGCTGTGCTCCGGGACGGTCAAGGTTCGGCCACCTGGGCCGTGGCGAGGTaGCGTGCGGGGTCACCGACG +
Preference number: 4 (lower is better)
Translates to: APVPCPEAVLRDGQGSATWAVAR*RAGSPT
Trigger: CGTCGGTGACCCCGCACGGCACCTCGCCACGGCCCA...GGTGGCCGAACCTTGACCGTCCCGGAGCACAGCTTCAGGGCAGGGAACCGGAGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378288.8
CDS-3UTR CCA 90 bp CTTGGGTCTCTGGGCGGTGGCGCAGGCTGCAGCCAGGCGAGGCCCTCAGTGGATGCTGGCGGCGTGCTCTaGGGTGTAGGGGCTGGCCGA +
Preference number: 4 (lower is better)
Translates to: LGSLGGGAGCSQARPSVDAGGVL*GVGAGR
Trigger: TCGGCCAGCCCCTACACCCCAGAGCACGCCGCCAGC...ATCCACTGAGGGCCTCGCCTGGCTGCAGCCTGCGCCACCGCCCAGAGACCCAAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR CCA 90 bp GGCTGCTTGCGGGCCTTGCAGTCGGGCAGGTCGAAGCCGAAGTCCGCCCACTCGGCTGGCGGCGTGCTCTaGGGTGTAGGGGCTGGCCGA +
Preference number: 4 (lower is better)
Translates to: GCLRALQSGRSKPKSAHSAGGVL*GVGAGR
Trigger: TCGGCCAGCCCCTACACCCCAGAGCACGCCGCCAGC...CGAGTGGGCGGACTTCGGCTTCGACCTGCCCGACTGCAAGGCCCGCAAGCAGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR CCA 90 bp GGGCCTTGCAGTCGGGCAGGTCGAAGCCGAAGTCCGCCCACTCGTCAGGGCCGCAGTGGGTGGGCACGCTaGCGGCGTGCTCTGGGGTGT +
Preference number: 4 (lower is better)
Translates to: GPCSRAGRSRSPPTRQGRSGWAR*RRALGC
Trigger: ACACCCCAGAGCACGCCGCCAGCGTGCCCACCCACT...GCGGCCCTGACGAGTGGGCGGACTTCGGCTTCGACCTGCCCGACTGCAAGGCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR CCA 90 bp CTGGAAGTCGGAGCCGACGCTGCGGTCCCCACCCACGCCTGCCATGGAGCACGCAGTGGGTGGGCACGCTaGCGGCGTGCTCTGGGGTGT +
Preference number: 4 (lower is better)
Translates to: LEVGADAAVPTHACHGARSGWAR*RRALGC
Trigger: ACACCCCAGAGCACGCCGCCAGCGTGCCCACCCACT...GCGTGCTCCATGGCAGGCGTGGGTGGGGACCGCAGCGTCGGCTCCGACTTCCAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp TCAGGGCCGCCGCCTGGGCCGCCGCGGTTGGGGATGGTGATGGTGTGGCGCACGCGTCCCCACCTGTGGTaGCTCATAGGGCACCACGAC +
Preference number: 4 (lower is better)
Translates to: SGPPPGPPRLGMVMVWRTRPHLW*LIGHHD
Trigger: GTCGTGGTGCCCTATGAGCCACCACAGGTGGGGACG...CGTGCGCCACACCATCACCATCCCCAACCGCGGCGGCCCAGGCGGCGGCCCTGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR CCA 90 bp GGCGGTGGCGCAGGCTGCAGCCAGGCGAGGCCCTCAGTGGATCTCGGCCTCCGTGCAGGCCCCGCCAGATaGTCATGCGGTACTGCTCGG +
Preference number: 4 (lower is better)
Translates to: GGGAGCSQARPSVDLGLRAGPAR*SCGTAR
Trigger: CCGAGCAGTACCGCATGACCATCTGGCGGGGCCTGC...ACGGAGGCCGAGATCCACTGAGGGCCTCGCCTGGCTGCAGCCTGCGCCACCGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR CCA 90 bp TGCGCTGGGCTGAGGAACCCCGGGTGTCAGGATGGGCCCCCGCGGCTCCTGAAGCCCCTGAGCCGCCGATaGAGATGGTGGCCGCGTTGC +
Preference number: 4 (lower is better)
Translates to: CAGLRNPGCQDGPPRLLKPLSRR*RWWPRC
Trigger: GCAACGCGGCCACCATCTCCATCGGCGGCTCAGGGG...CTTCAGGAGCCGCGGGGGCCCATCCTGACACCCGGGGTTCCTCAGCCCAGCGCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp TGCGCTGGGCTGAGGAACCCCGGGTGTCAGGATGGGCCCCCGCGGCTCCTGAAGCACAGGCGGCTTCGGTaGCTGGGCCTTTCCTGGGGC +
Preference number: 4 (lower is better)
Translates to: CAGLRNPGCQDGPPRLLKHRRLR*LGLSWG
Trigger: GCCCCAGGAAAGGCCCAGCCACCGAAGCCGCCTGTG...CTTCAGGAGCCGCGGGGGCCCATCCTGACACCCGGGGTTCCTCAGCCCAGCGCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp GGGATGGGCCGGACCTTGCCTTTCCCCGGGCACAGCCCGAAGGTCCTGCCTCCTCACCCACGCCTGCCATaGAGCACGCCGGGGCAGTGG +
Preference number: 4 (lower is better)
Translates to: GMGRTLPFPGHSPKVLPPHPRLP*STPGQW
Trigger: CCACTGCCCCGGCGTGCTCCATGGCAGGCGTGGGTG...AGGAGGCAGGACCTTCGGGCTGTGCCCGGGGAAAGGCAAGGTCCGGCCCATCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp TGCGCTGGGCTGAGGAACCCCGGGTGTCAGGATGGGCCCCCGCGGCTCCTGAAGCCCACCCGGCCTTCCTaGGAACAAGTCCCGCCCACC +
Preference number: 4 (lower is better)
Translates to: CAGLRNPGCQDGPPRLLKPTRPS*EQVPPT
Trigger: GGTGGGCGGGACTTGTTCCCAGGAAGGCCGGGTGGG...CTTCAGGAGCCGCGGGGGCCCATCCTGACACCCGGGGTTCCTCAGCCCAGCGCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp CTGGAAGTCGGAGCCGACGCTGCGGTCCCCACCCACGCCTGCCATGGAGCACGCCAGGGGGTGTGGAGCTaGCCGTGCCAGAAGGGGCCA +
Preference number: 4 (lower is better)
Translates to: LEVGADAAVPTHACHGARQGVWS*PCQKGP
Trigger: TGGCCCCTTCTGGCACGGCCAGCTCCACACCCCCTG...GCGTGCTCCATGGCAGGCGTGGGTGGGGACCGCAGCGTCGGCTCCGACTTCCAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp CCGCCGCCTGGGCCGCCGCGGTTGGGGATGGTGATGGTGTGGCGCACGCGGAAGATGGACTGGGCGCTGTaGCTGCTGCTCATCTCGCCG +
Preference number: 4 (lower is better)
Translates to: PPPGPPRLGMVMVWRTRKMDWAL*LLLISP
Trigger: CGGCGAGATGAGCAGCAGCCACAGCGCCCAGTCCAT...CTTCCGCGTGCGCCACACCATCACCATCCCCAACCGCGGCGGCCCAGGCGGCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
CDS-3UTR CCA 90 bp TGGGCGGTGGCGCAGGCTGCAGCCAGGCGAGGCCCTCAGTGGATCTCGGCCTCCCCCGAGACCATGGACTaGGCGCTGTGGCTGCTGCTC +
Preference number: 4 (lower is better)
Translates to: WAVAQAAARRGPQWISASPETMD*ALWLLL
Trigger: GAGCAGCAGCCACAGCGCCCAGTCCATGGTCTCGGG...GGAGGCCGAGATCCACTGAGGGCCTCGCCTGGCTGCAGCCTGCGCCACCGCCCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
CDS-3UTR CCA 90 bp GGGCCTTGCAGTCGGGCAGGTCGAAGCCGAAGTCCGCCCACTCGTCAGGGCCGCGGGACCCCGAGACCATaGACTGGGCGCTGTGGCTGC +
Preference number: 4 (lower is better)
Translates to: GPCSRAGRSRSPPTRQGRGTPRP*TGRCGC
Trigger: GCAGCCACAGCGCCCAGTCCATGGTCTCGGGGTCCC...GCGGCCCTGACGAGTGGGCGGACTTCGGCTTCGACCTGCCCGACTGCAAGGCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
CDS-3UTR CCA 90 bp GGGATGGGCCGGACCTTGCCTTTCCCCGGGCACAGCCCGAAGGTCCTGCCTCCTCCGTGGGACGAGGCATaGATCTGGGCGGCCCGAGGG +
Preference number: 4 (lower is better)
Translates to: GMGRTLPFPGHSPKVLPPPWDEA*IWAARG
Trigger: CCCTCGGGCCGCCCAGATCCATGCCTCGTCCCACGG...AGGAGGCAGGACCTTCGGGCTGTGCCCGGGGAAAGGCAAGGTCCGGCCCATCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378280.5
ENST00000378285.5
ENST00000378288.8
CDS-3UTR CCA 90 bp CAGCTGCTGCGCGGTGCTGTAGTCGTGGCCCTGCTTCAGGTCCTGCAGGCCCCGCCGTGGGACGAGGCATaGATCTGGGCGGCCCGAGGG +
Preference number: 4 (lower is better)
Translates to: QLLRGAVVVALLQVLQAPPWDEA*IWAARG
Trigger: CCCTCGGGCCGCCCAGATCCATGCCTCGTCCCACGG...CGGGGCCTGCAGGACCTGAAGCAGGGCCACGACTACAGCACCGCGCAGCAGCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378280.5
ENST00000378285.5
CDS-3UTR TCA 90 bp GCTGCTGCGCGGTGCTGTAGTCGTGGCCCTGCTTCAGGTCCTGCAGGCCCCGCCTGCCTTCCACGCGGATaGGGTGGCTGGCTGGAGCAG +
Preference number: 4 (lower is better)
Translates to: AAARCCSRGPASGPAGPACLPRG*GGWLEQ
Trigger: CTGCTCCAGCCAGCCACCTCATCCGCGTGGAAGGCA...GGCGGGGCCTGCAGGACCTGAAGCAGGGCCACGACTACAGCACCGCGCAGCAGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR TCA 90 bp CAAGCGTGCACCCAGGCGACTGTGCTGTCAGCGGCCCCCGGGGAGGTGGACGGTGCTGTCCCTTTCTGCTaGGGGGTCCCCGAGGAGAGG +
Preference number: 4 (lower is better)
Translates to: QACTQATVLSAAPGEVDGAVPFC*GVPEER
Trigger: CCTCTCCTCGGGGACCCCTCAGCAGAAAGGGACAGC...ACCGTCCACCTCCCCGGGGGCCGCTGACAGCACAGTCGCCTGGGTGCACGCTTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR TCA 90 bp CTGGAAGTCGGAGCCGACGCTGCGGTCCCCACCCACGCCTGCCATGGAGCACGCACATCTGCGCTGGGCTaGGGAACCCCGGGTGTCAGG +
Preference number: 4 (lower is better)
Translates to: LEVGADAAVPTHACHGARTSALG*GTPGVR
Trigger: CCTGACACCCGGGGTTCCTCAGCCCAGCGCAGATGT...GCGTGCTCCATGGCAGGCGTGGGTGGGGACCGCAGCGTCGGCTCCGACTTCCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR TCA 90 bp CTTGGGTCTCTGGGCGGTGGCGCAGGCTGCAGCCAGGCGAGGCCCTCAGTGGATCGTGGCCATGGTTGTTaGGCATCCCGGGGCGGCCTC +
Preference number: 4 (lower is better)
Translates to: LGSLGGGAGCSQARPSVDRGHGC*ASRGGL
Trigger: GAGGCCGCCCCGGGATGCTCAACAACCATGGCCACG...ATCCACTGAGGGCCTCGCCTGGCTGCAGCCTGCGCCACCGCCCAGAGACCCAAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378280.5
CDS-3UTR GCA 90 bp ACGCGGAAGTGCACGGCCTCCATGACCCGCTGGCGCTGCAGTTCCCCTGAGCCGCCGAGGCCGCGCGGCTaGTCATCTGGTCCATGGTGC +
Preference number: 4 (lower is better)
Translates to: TRKCTASMTRWRCSSPEPPRPRG*SSGPWC
Trigger: GCACCATGGACCAGATGAGCAGCCGCGCGGCCTCGG...CGGCTCAGGGGAACTGCAGCGCCAGCGGGTCATGGAGGCCGTGCACTTCCGCGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR GCA 90 bp GCCGCCGATGGAGATGGTGGCCGCGTTGCTAGAGCGGAGCAGCTGCTGCGCGGTCCGAGGCCGCGCGGCTaGTCATCTGGTCCATGGTGC +
Preference number: 4 (lower is better)
Translates to: AADGDGGRVARAEQLLRGPRPRG*SSGPWC
Trigger: GCACCATGGACCAGATGAGCAGCCGCGCGGCCTCGG...ACCGCGCAGCAGCTGCTCCGCTCTAGCAACGCGGCCACCATCTCCATCGGCGGC
70% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR GCA 90 bp GGGCCTTGCAGTCGGGCAGGTCGAAGCCGAAGTCCGCCCACTCGTCAGGGCCGCCAGGACAGGCGCAGATaGGGCCCTCAAAGGACCGGC +
Preference number: 4 (lower is better)
Translates to: GPCSRAGRSRSPPTRQGRQDRRR*GPQRTG
Trigger: GCCGGTCCTTTGAGGGCCGCATCTGCGCCTGTCCTG...GCGGCCCTGACGAGTGGGCGGACTTCGGCTTCGACCTGCCCGACTGCAAGGCCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR GCA 90 bp TCGGGCAGGTCGAAGCCGAAGTCCGCCCACTCGTCAGGGCCGCCGCCTGGGCCGGTGTCCTCGTCTCCATaGCGCCGCTTCTTCACACCG +
Preference number: 4 (lower is better)
Translates to: SGRSKPKSAHSSGPPPGPVSSSP*RRFFTP
Trigger: CGGTGTGAAGAAGCGGCGGCATGGAGACGAGGACAC...CGGCCCAGGCGGCGGCCCTGACGAGTGGGCGGACTTCGGCTTCGACCTGCCCGA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR GCA 90 bp CAGCTGCTGCGCGGTGCTGTAGTCGTGGCCCTGCTTCAGGTCCTGCAGGCCCCGATGACCCGCTGGCGCTaGAGTTCCCCTGAGCCGCCG +
Preference number: 4 (lower is better)
Translates to: QLLRGAVVVALLQVLQAPMTRWR*SSPEPP
Trigger: CGGCGGCTCAGGGGAACTGCAGCGCCAGCGGGTCAT...CGGGGCCTGCAGGACCTGAAGCAGGGCCACGACTACAGCACCGCGCAGCAGCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR GCA 90 bp CTTGGGTCTCTGGGCGGTGGCGCAGGCTGCAGCCAGGCGAGGCCCTCAGTGGATATGACCCGCTGGCGCTaGAGTTCCCCTGAGCCGCCG +
Preference number: 4 (lower is better)
Translates to: LGSLGGGAGCSQARPSVDMTRWR*SSPEPP
Trigger: CGGCGGCTCAGGGGAACTGCAGCGCCAGCGGGTCAT...ATCCACTGAGGGCCTCGCCTGGCTGCAGCCTGCGCCACCGCCCAGAGACCCAAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR GCA 90 bp GATGGTGTGGCGCACGCGGAAGTGCACGGCCTCCATGACCCGCTGGCGCTGCAGTGGCGCACGCGGAAGTaGACGGCCTCCATGACCCGC +
Preference number: 4 (lower is better)
Translates to: DGVAHAEVHGLHDPLALQWRTRK*TASMTR
Trigger: GCGGGTCATGGAGGCCGTGCACTTCCGCGTGCGCCA...CTGCAGCGCCAGCGGGTCATGGAGGCCGTGCACTTCCGCGTGCGCCACACCATC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR GCA 90 bp TCGGGCAGGTCGAAGCCGAAGTCCGCCCACTCGTCAGGGCCGCCGCCTGGGCCGTCCTCCTTGATGGGCTaGTTGCGGGCCTTGCAGTCG +
Preference number: 4 (lower is better)
Translates to: SGRSKPKSAHSSGPPPGPSSLMG*LRALQS
Trigger: CGACTGCAAGGCCCGCAAGCAGCCCATCAAGGAGGA...CGGCCCAGGCGGCGGCCCTGACGAGTGGGCGGACTTCGGCTTCGACCTGCCCGA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR GCA 90 bp GGGTGTCAGGATGGGCCCCCGCGGCTCCTGAAGTGGAACATGGGGGAAGAGTGGGGCGGTGGCGCAGGCTaGAGCCAGGCGAGGCCCTCA +
Preference number: 4 (lower is better)
Translates to: GCQDGPPRLLKWNMGEEWGGGAG*SQARPS
Trigger: TGAGGGCCTCGCCTGGCTGCAGCCTGCGCCACCGCC...CCACTCTTCCCCCATGTTCCACTTCAGGAGCCGCGGGGGCCCATCCTGACACCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp GGCAGGAAGGAGGCGGTCCTGCAGAATACAGCGTGCTGGGGGCAGAGGCCAGTCGGCGGTGGCGCAGGCTaGAGCCAGGCGAGGCCCTCA +
Preference number: 4 (lower is better)
Translates to: GRKEAVLQNTACWGQRPVGGGAG*SQARPS
Trigger: TGAGGGCCTCGCCTGGCTGCAGCCTGCGCCACCGCC...GACTGGCCTCTGCCCCCAGCACGCTGTATTCTGCAGGACCGCCTCCTTCCTGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp GGGATGGGCCGGACCTTGCCTTTCCCCGGGCACAGCCCGAAGGTCCTGCCTCCTGGATGGGCCGGACCTTaGCTTTCCCCGGGCACAGCC +
Preference number: 4 (lower is better)
Translates to: GMGRTLPFPGHSPKVLPPGWAGP*LSPGTA
Trigger: GGCTGTGCCCGGGGAAAGGCAAGGTCCGGCCCATCC...AGGAGGCAGGACCTTCGGGCTGTGCCCGGGGAAAGGCAAGGTCCGGCCCATCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000346387.8
ENST00000354437.8
ENST00000357733.7
ENST00000378280.5
ENST00000378285.5
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp GCAGAGAGAGTCCCCAGCCCCCGGCGCGGGCAAGACGCAGTTAGGGACATTCCCAGTCGGAGCCGACGCTaGGGTCCCCACCCACGCCTG +
Preference number: 4 (lower is better)
Translates to: AERVPSPRRGQDAVRDIPSRSRR*GPHPRL
Trigger: CAGGCGTGGGTGGGGACCGCAGCGTCGGCTCCGACT...GGGAATGTCCCTAACTGCGTCTTGCCCGCGCCGGGGGCTGGGGACTCTCTCTGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp CCGCCGATGGAGATGGTGGCCGCGTTGCTAGAGCGGAGCAGCTGCTGCGCGGTGGTGTGGAGCTGGCCGTaGCAGAAGGGGCCAGGCAGC +
Preference number: 4 (lower is better)
Translates to: PPMEMVAALLERSSCCAVVWSWP*QKGPGS
Trigger: GCTGCCTGGCCCCTTCTGGCACGGCCAGCTCCACAC...CACCGCGCAGCAGCTGCTCCGCTCTAGCAACGCGGCCACCATCTCCATCGGCGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000604074.5
CDS-3UTR GCA 90 bp GTGTCAGGATGGGCCCCCGCGGCTCCTGAAGTGGAACATGGGGGAAGAGTGGGGGCACCCAGGCGACTGTaGTGTCAGCGGCCCCCGGGG +
Preference number: 4 (lower is better)
Translates to: VSGWAPAAPEVEHGGRVGAPRRL*CQRPPG
Trigger: CCCCGGGGGCCGCTGACAGCACAGTCGCCTGGGTGC...CCCCACTCTTCCCCCATGTTCCACTTCAGGAGCCGCGGGGGCCCATCCTGACAC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 20 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp GCTGCTGCGCGGTGCTGTAGTCGTGGCCCTGCTTCAGGTCCTGCAGGCCCCGCCCCCCATCAGGGGAGGTaGCGGTGGACTGGGCCATCT +
Preference number: 4 (lower is better)
Translates to: AAARCCSRGPASGPAGPAPHQGR*RWTGPS
Trigger: AGATGGCCCAGTCCACCGCCACCTCCCCTGATGGGG...GGCGGGGCCTGCAGGACCTGAAGCAGGGCCACGACTACAGCACCGCGCAGCAGC
70% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000354437.8
ENST00000604074.5
CDS-3UTR CCA 90 bp GATGGTGTGGCGCACGCGGAAGTGCACGGCCTCCATGACCCGCTGGCGCTGCAGAGTGGGTGGGCACGCTaGCGGCGTGCTCTGGGGTGT +
Preference number: 4 (lower is better)
Translates to: DGVAHAEVHGLHDPLALQSGWAR*RRALGC
Trigger: ACACCCCAGAGCACGCCGCCAGCGTGCCCACCCACT...CTGCAGCGCCAGCGGGTCATGGAGGCCGTGCACTTCCGCGTGCGCCACACCATC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR CCA 90 bp CCCTGCTTCAGGTCCTGCAGGCCCCGCCAGATGGTCATGCGGTACTGCTCGGGGCGTAGGGCGAGTGGGTaGGCACGCTGGCGGCGTGCT +
Preference number: 4 (lower is better)
Translates to: PCFRSCRPRQMVMRYCSGRRASG*ARWRRA
Trigger: AGCACGCCGCCAGCGTGCCCACCCACTCGCCCTACG...CCCCGAGCAGTACCGCATGACCATCTGGCGGGGCCTGCAGGACCTGAAGCAGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR CCA 90 bp CCCATTGGCCCACCTGCCTGCAATGAAGGGCCTCGTCACACCCGTGAGGCCCCCCGTAGGGCGAGTGGGTaGGCACGCTGGCGGCGTGCT +
Preference number: 4 (lower is better)
Translates to: PIGPPACNEGPRHTREAPRRASG*ARWRRA
Trigger: AGCACGCCGCCAGCGTGCCCACCCACTCGCCCTACG...GGGGGCCTCACGGGTGTGACGAGGCCCTTCATTGCAGGCAGGTGGGCCAATGGG
70% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp GCTGCGCGGTGCTGTAGTCGTGGCCCTGCTTCAGGTCCTGCAGGCCCCGCCAGAGGCGGTGCCTGGGGGTaGCGGGGTGGACACCTTGAT +
Preference number: 4 (lower is better)
Translates to: AARCCSRGPASGPAGPARGGAWG*RGGHLD
Trigger: ATCAAGGTGTCCACCCCGCCACCCCCAGGCACCGCC...TCTGGCGGGGCCTGCAGGACCTGAAGCAGGGCCACGACTACAGCACCGCGCAGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR CCA 90 bp AGAGCGGAGCAGCTGCTGCGCGGTGCTGTAGTCGTGGCCCTGCTTCAGGTCCTGCAGGCATGGCCCGGATaGCGGTGCCTGGGGGTGGCG +
Preference number: 4 (lower is better)
Translates to: RAEQLLRGAVVVALLQVLQAWPG*RCLGVA
Trigger: CGCCACCCCCAGGCACCGCCATCCGGGCCATGCCTG...CAGGACCTGAAGCAGGGCCACGACTACAGCACCGCGCAGCAGCTGCTCCGCTCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR CCA 90 bp GTGTCAGGATGGGCCCCCGCGGCTCCTGAAGTGGAACATGGGGGAAGAGTGGGGCAGGCATGGCCCGGATaGCGGTGCCTGGGGGTGGCG +
Preference number: 4 (lower is better)
Translates to: VSGWAPAAPEVEHGGRVGQAWPG*RCLGVA
Trigger: CGCCACCCCCAGGCACCGCCATCCGGGCCATGCCTG...CCCCACTCTTCCCCCATGTTCCACTTCAGGAGCCGCGGGGGCCCATCCTGACAC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp CGGTGCTGTAGTCGTGGCCCTGCTTCAGGTCCTGCAGGCCCCGCCAGATGGTCACAGGCATGGCCCGGATaGCGGTGCCTGGGGGTGGCG +
Preference number: 4 (lower is better)
Translates to: RCCSRGPASGPAGPARWSQAWPG*RCLGVA
Trigger: CGCCACCCCCAGGCACCGCCATCCGGGCCATGCCTG...TGACCATCTGGCGGGGCCTGCAGGACCTGAAGCAGGGCCACGACTACAGCACCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR CCA 90 bp TCGGGCAGGTCGAAGCCGAAGTCCGCCCACTCGTCAGGGCCGCCGCCTGGGCCGTCCCGAGCTCGTGGTTaGGGCAGCGTTTCACGACGT +
Preference number: 4 (lower is better)
Translates to: SGRSKPKSAHSSGPPPGPSRARG*GSVSRR
Trigger: ACGTCGTGAAACGCTGCCCCAACCACGAGCTCGGGA...CGGCCCAGGCGGCGGCCCTGACGAGTGGGCGGACTTCGGCTTCGACCTGCCCGA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR CCA 90 bp ACGCGGAAGTGCACGGCCTCCATGACCCGCTGGCGCTGCAGTTCCCCTGAGCCGCCCCTGAGCCGCCGATaGAGATGGTGGCCGCGTTGC +
Preference number: 4 (lower is better)
Translates to: TRKCTASMTRWRCSSPEPPLSRR*RWWPRC
Trigger: GCAACGCGGCCACCATCTCCATCGGCGGCTCAGGGG...CGGCTCAGGGGAACTGCAGCGCCAGCGGGTCATGGAGGCCGTGCACTTCCGCGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR CCA 90 bp CTTGGGTCTCTGGGCGGTGGCGCAGGCTGCAGCCAGGCGAGGCCCTCAGTGGATCCCCTGAGCCGCCGATaGAGATGGTGGCCGCGTTGC +
Preference number: 4 (lower is better)
Translates to: LGSLGGGAGCSQARPSVDPLSRR*RWWPRC
Trigger: GCAACGCGGCCACCATCTCCATCGGCGGCTCAGGGG...ATCCACTGAGGGCCTCGCCTGGCTGCAGCCTGCGCCACCGCCCAGAGACCCAAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR CCA 90 bp GCTGCGCGGTGCTGTAGTCGTGGCCCTGCTTCAGGTCCTGCAGGCCCCGCCAGACCCCTGAGCCGCCGATaGAGATGGTGGCCGCGTTGC +
Preference number: 4 (lower is better)
Translates to: AARCCSRGPASGPAGPARPLSRR*RWWPRC
Trigger: GCAACGCGGCCACCATCTCCATCGGCGGCTCAGGGG...TCTGGCGGGGCCTGCAGGACCTGAAGCAGGGCCACGACTACAGCACCGCGCAGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR CCA 90 bp CCTGGGCCGCCGCGGTTGGGGATGGTGATGGTGTGGCGCACGCGGAAGTGCACGGCCTCCATGACCCGCTaGCGCTGCAGTTCCCCTGAG +
Preference number: 4 (lower is better)
Translates to: PGPPRLGMVMVWRTRKCTASMTR*RCSSPE
Trigger: CTCAGGGGAACTGCAGCGCCAGCGGGTCATGGAGGC...CGTGCACTTCCGCGTGCGCCACACCATCACCATCCCCAACCGCGGCGGCCCAGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR CCA 90 bp GCCTTGCAGTCGGGCAGGTCGAAGCCGAAGTCCGCCCACTCGTCAGGGCCGCCGGCCTCCATGACCCGCTaGCGCTGCAGTTCCCCTGAG +
Preference number: 4 (lower is better)
Translates to: ALQSGRSKPKSAHSSGPPASMTR*RCSSPE
Trigger: CTCAGGGGAACTGCAGCGCCAGCGGGTCATGGAGGC...CGGCGGCCCTGACGAGTGGGCGGACTTCGGCTTCGACCTGCCCGACTGCAAGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR CCA 90 bp CAAGCGTGCACCCAGGCGACTGTGCTGTCAGCGGCCCCCGGGGAGGTGGACGGTGCCTCCATGACCCGCTaGCGCTGCAGTTCCCCTGAG +
Preference number: 4 (lower is better)
Translates to: QACTQATVLSAAPGEVDGASMTR*RCSSPE
Trigger: CTCAGGGGAACTGCAGCGCCAGCGGGTCATGGAGGC...ACCGTCCACCTCCCCGGGGGCCGCTGACAGCACAGTCGCCTGGGTGCACGCTTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp CGCTGCAGTTCCCCTGAGCCGCCGATGGAGATGGTGGCCGCGTTGCTAGAGCGGTGGGTCTCTGGGCGGTaGCGCAGGCTGCAGCCAGGC +
Preference number: 4 (lower is better)
Translates to: RCSSPEPPMEMVAALLERWVSGR*RRLQPG
Trigger: GCCTGGCTGCAGCCTGCGCCACCGCCCAGAGACCCA...CCGCTCTAGCAACGCGGCCACCATCTCCATCGGCGGCTCAGGGGAACTGCAGCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR CCA 90 bp GGCTGCTTGCGGGCCTTGCAGTCGGGCAGGTCGAAGCCGAAGTCCGCCCACTCGGGCAGCTTGGGTCTCTaGGCGGTGGCGCAGGCTGCA +
Preference number: 4 (lower is better)
Translates to: GCLRALQSGRSKPKSAHSGSLGL*AVAQAA
Trigger: TGCAGCCTGCGCCACCGCCCAGAGACCCAAGCTGCC...CGAGTGGGCGGACTTCGGCTTCGACCTGCCCGACTGCAAGGCCCGCAAGCAGCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR CCA 90 bp ACGCGGAAGTGCACGGCCTCCATGACCCGCTGGCGCTGCAGTTCCCCTGAGCCGGGCAGCTTGGGTCTCTaGGCGGTGGCGCAGGCTGCA +
Preference number: 4 (lower is better)
Translates to: TRKCTASMTRWRCSSPEPGSLGL*AVAQAA
Trigger: TGCAGCCTGCGCCACCGCCCAGAGACCCAAGCTGCC...CGGCTCAGGGGAACTGCAGCGCCAGCGGGTCATGGAGGCCGTGCACTTCCGCGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR CCA 90 bp ACGCGGAAGTGCACGGCCTCCATGACCCGCTGGCGCTGCAGTTCCCCTGAGCCGGGCGGCTTCGGTGGCTaGGCCTTTCCTGGGGCCTGT +
Preference number: 4 (lower is better)
Translates to: TRKCTASMTRWRCSSPEPGGFGG*AFPGAC
Trigger: ACAGGCCCCAGGAAAGGCCCAGCCACCGAAGCCGCC...CGGCTCAGGGGAACTGCAGCGCCAGCGGGTCATGGAGGCCGTGCACTTCCGCGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR CCA 90 bp GCTGCGCGGTGCTGTAGTCGTGGCCCTGCTTCAGGTCCTGCAGGCCCCGCCAGACACAGGCGGCTTCGGTaGCTGGGCCTTTCCTGGGGC +
Preference number: 4 (lower is better)
Translates to: AARCCSRGPASGPAGPARHRRLR*LGLSWG
Trigger: GCCCCAGGAAAGGCCCAGCCACCGAAGCCGCCTGTG...TCTGGCGGGGCCTGCAGGACCTGAAGCAGGGCCACGACTACAGCACCGCGCAGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR CCA 90 bp GCTCCGGTTCCCTGCCCTGAAGCTGTGCTCCGGGACGGTCAAGGTTCGGCCACCCACCCACGCCTGCCATaGAGCACGCCGGGGCAGTGG +
Preference number: 4 (lower is better)
Translates to: APVPCPEAVLRDGQGSATHPRLP*STPGQW
Trigger: CCACTGCCCCGGCGTGCTCCATGGCAGGCGTGGGTG...GGTGGCCGAACCTTGACCGTCCCGGAGCACAGCTTCAGGGCAGGGAACCGGAGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp CCCTGCTTCAGGTCCTGCAGGCCCCGCCAGATGGTCATGCGGTACTGCTCGGGGCACCCACGCCTGCCATaGAGCACGCCGGGGCAGTGG +
Preference number: 4 (lower is better)
Translates to: PCFRSCRPRQMVMRYCSGHPRLP*STPGQW
Trigger: CCACTGCCCCGGCGTGCTCCATGGCAGGCGTGGGTG...CCCCGAGCAGTACCGCATGACCATCTGGCGGGGCCTGCAGGACCTGAAGCAGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000604074.5
CDS-3UTR CCA 90 bp GCGGTGGCGCAGGCTGCAGCCAGGCGAGGCCCTCAGTGGATCTCGGCCTCCGTGGCTGCTCCTCGTGGATaGAGGTGGCCCCAGAAAGGG +
Preference number: 4 (lower is better)
Translates to: AVAQAAARRGPQWISASVAAPRG*RWPQKG
Trigger: CCCTTTCTGGGGCCACCTCCATCCACGAGGAGCAGC...CACGGAGGCCGAGATCCACTGAGGGCCTCGCCTGGCTGCAGCCTGCGCCACCGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000604074.5
CDS-3UTR CCA 90 bp GCGGTGGCGCAGGCTGCAGCCAGGCGAGGCCCTCAGTGGATCTCGGCCTCCGTGAGCCTGCACTCTGGGTaGTGTCTCGGCTTGCGTGGG +
Preference number: 4 (lower is better)
Translates to: AVAQAAARRGPQWISASVSLHSG*CLGLRG
Trigger: CCCACGCAAGCCGAGACACCACCCAGAGTGCAGGCT...CACGGAGGCCGAGATCCACTGAGGGCCTCGCCTGGCTGCAGCCTGCGCCACCGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604074.5
CDS-3UTR CCA 90 bp CTGGAAGTCGGAGCCGACGCTGCGGTCCCCACCCACGCCTGCCATGGAGCACGCGAGGTGACATGCAGCTaGGGTGGCTGCGCCACCCTG +
Preference number: 4 (lower is better)
Translates to: LEVGADAAVPTHACHGAREVTCS*GGCATL
Trigger: CAGGGTGGCGCAGCCACCCCAGCTGCATGTCACCTC...GCGTGCTCCATGGCAGGCGTGGGTGGGGACCGCAGCGTCGGCTCCGACTTCCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp TGCGCTGGGCTGAGGAACCCCGGGTGTCAGGATGGGCCCCCGCGGCTCCTGAAGCCAGCAGCCCAGGCCTaGTGGGAACGCTGGGGGAAT +
Preference number: 4 (lower is better)
Translates to: CAGLRNPGCQDGPPRLLKPAAQA*WERWGN
Trigger: ATTCCCCCAGCGTTCCCACCAGGCCTGGGCTGCTGG...CTTCAGGAGCCGCGGGGGCCCATCCTGACACCCGGGGTTCCTCAGCCCAGCGCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp TCAGGGCCGCCGCCTGGGCCGCCGCGGTTGGGGATGGTGATGGTGTGGCGCACGTGCTCATCTCGCCGTTaGCTGGCACTGCGTGGCCAT +
Preference number: 4 (lower is better)
Translates to: SGPPPGPPRLGMVMVWRTCSSRR*LALRGH
Trigger: ATGGCCACGCAGTGCCAGCCAACGGCGAGATGAGCA...CGTGCGCCACACCATCACCATCCCCAACCGCGGCGGCCCAGGCGGCGGCCCTGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
CDS-3UTR CCA 90 bp TGGGCGGTGGCGCAGGCTGCAGCCAGGCGAGGCCCTCAGTGGATCTCGGCCTCCATGGACTGGGCGCTGTaGCTGCTGCTCATCTCGCCG +
Preference number: 4 (lower is better)
Translates to: WAVAQAAARRGPQWISASMDWAL*LLLISP
Trigger: CGGCGAGATGAGCAGCAGCCACAGCGCCCAGTCCAT...GGAGGCCGAGATCCACTGAGGGCCTCGCCTGGCTGCAGCCTGCGCCACCGCCCA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
CDS-3UTR CCA 90 bp GCCTGGGCCGCCGCGGTTGGGGATGGTGATGGTGTGGCGCACGCGGAAGTGCACCCCGAGACCATGGACTaGGCGCTGTGGCTGCTGCTC +
Preference number: 4 (lower is better)
Translates to: AWAAAVGDGDGVAHAEVHPETMD*ALWLLL
Trigger: GAGCAGCAGCCACAGCGCCCAGTCCATGGTCTCGGG...GTGCACTTCCGCGTGCGCCACACCATCACCATCCCCAACCGCGGCGGCCCAGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
CDS-3UTR CCA 90 bp GTGTGGCGCACGCGGAAGTGCACGGCCTCCATGACCCGCTGGCGCTGCAGTTCCGGGACCCCGAGACCATaGACTGGGCGCTGTGGCTGC +
Preference number: 4 (lower is better)
Translates to: VWRTRKCTASMTRWRCSSGTPRP*TGRCGC
Trigger: GCAGCCACAGCGCCCAGTCCATGGTCTCGGGGTCCC...GGAACTGCAGCGCCAGCGGGTCATGGAGGCCGTGCACTTCCGCGTGCGCCACAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
CDS-3UTR CCA 90 bp GCTGCGCGGTGCTGTAGTCGTGGCCCTGCTTCAGGTCCTGCAGGCCCCGCCAGAGACGAGGCATGGATCTaGGCGGCCCGAGGGGAAGGG +
Preference number: 4 (lower is better)
Translates to: AARCCSRGPASGPAGPARDEAWI*AARGEG
Trigger: CCCTTCCCCTCGGGCCGCCCAGATCCATGCCTCGTC...TCTGGCGGGGCCTGCAGGACCTGAAGCAGGGCCACGACTACAGCACCGCGCAGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378280.5
ENST00000378285.5
CDS-3UTR CCA 90 bp GGGATGGGCCGGACCTTGCCTTTCCCCGGGCACAGCCCGAAGGTCCTGCCTCCTGACGAGGCATGGATCTaGGCGGCCCGAGGGGAAGGG +
Preference number: 4 (lower is better)
Translates to: GMGRTLPFPGHSPKVLPPDEAWI*AARGEG
Trigger: CCCTTCCCCTCGGGCCGCCCAGATCCATGCCTCGTC...AGGAGGCAGGACCTTCGGGCTGTGCCCGGGGAAAGGCAAGGTCCGGCCCATCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378280.5
ENST00000378285.5
ENST00000378288.8
CDS-3UTR CCA 90 bp CCGCCGCCTGGGCCGCCGCGGTTGGGGATGGTGATGGTGTGGCGCACGCGGAAGGGAACTGGTGTCCCGTaGGACGAGGCATGGATCTGG +
Preference number: 4 (lower is better)
Translates to: PPPGPPRLGMVMVWRTRKGTGVP*DEAWIW
Trigger: CCAGATCCATGCCTCGTCCCACGGGACACCAGTTCC...CTTCCGCGTGCGCCACACCATCACCATCCCCAACCGCGGCGGCCCAGGCGGCGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378280.5
ENST00000378285.5
CDS-3UTR TCA 90 bp GCTGCGCGGTGCTGTAGTCGTGGCCCTGCTTCAGGTCCTGCAGGCCCCGCCAGATGCCTTCCACGCGGATaGGGTGGCTGGCTGGAGCAG +
Preference number: 4 (lower is better)
Translates to: AARCCSRGPASGPAGPARCLPRG*GGWLEQ
Trigger: CTGCTCCAGCCAGCCACCTCATCCGCGTGGAAGGCA...TCTGGCGGGGCCTGCAGGACCTGAAGCAGGGCCACGACTACAGCACCGCGCAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR TCA 90 bp CCGCCGATGGAGATGGTGGCCGCGTTGCTAGAGCGGAGCAGCTGCTGCGCGGTGTGCCTTCCACGCGGATaGGGTGGCTGGCTGGAGCAG +
Preference number: 4 (lower is better)
Translates to: PPMEMVAALLERSSCCAVCLPRG*GGWLEQ
Trigger: CTGCTCCAGCCAGCCACCTCATCCGCGTGGAAGGCA...CACCGCGCAGCAGCTGCTCCGCTCTAGCAACGCGGCCACCATCTCCATCGGCGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR TCA 90 bp GCCGCCGATGGAGATGGTGGCCGCGTTGCTAGAGCGGAGCAGCTGCTGCGCGGTGCGCTGCAGTTCCCCTaGGCCGCCGATGGAGATGGT +
Preference number: 4 (lower is better)
Translates to: AADGDGGRVARAEQLLRGALQFP*AADGDG
Trigger: ACCATCTCCATCGGCGGCTCAGGGGAACTGCAGCGC...ACCGCGCAGCAGCTGCTCCGCTCTAGCAACGCGGCCACCATCTCCATCGGCGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR TCA 90 bp GTGTGGCGCACGCGGAAGTGCACGGCCTCCATGACCCGCTGGCGCTGCAGTTCCGCGCTGCAGTTCCCCTaGGCCGCCGATGGAGATGGT +
Preference number: 4 (lower is better)
Translates to: VWRTRKCTASMTRWRCSSALQFP*AADGDG
Trigger: ACCATCTCCATCGGCGGCTCAGGGGAACTGCAGCGC...GGAACTGCAGCGCCAGCGGGTCATGGAGGCCGTGCACTTCCGCGTGCGCCACAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR TCA 90 bp GGGATGGGCCGGACCTTGCCTTTCCCCGGGCACAGCCCGAAGGTCCTGCCTCCTAGTGCACGGCCTCCATaGCCCGCTGGCGCTGCAGTT +
Preference number: 4 (lower is better)
Translates to: GMGRTLPFPGHSPKVLPPSARPP*PAGAAV
Trigger: AACTGCAGCGCCAGCGGGTCATGGAGGCCGTGCACT...AGGAGGCAGGACCTTCGGGCTGTGCCCGGGGAAAGGCAAGGTCCGGCCCATCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000346387.8
ENST00000354437.8
ENST00000357733.7
ENST00000378280.5
ENST00000378285.5
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR TCA 90 bp ACGCGGAAGTGCACGGCCTCCATGACCCGCTGGCGCTGCAGTTCCCCTGAGCCGAGTGCACGGCCTCCATaGCCCGCTGGCGCTGCAGTT +
Preference number: 4 (lower is better)
Translates to: TRKCTASMTRWRCSSPEPSARPP*PAGAAV
Trigger: AACTGCAGCGCCAGCGGGTCATGGAGGCCGTGCACT...CGGCTCAGGGGAACTGCAGCGCCAGCGGGTCATGGAGGCCGTGCACTTCCGCGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR TCA 90 bp TGCGCTGGGCTGAGGAACCCCGGGTGTCAGGATGGGCCCCCGCGGCTCCTGAAGCTGAGGGGCACTGGCTaGGGCGGTACCACATGCTTC +
Preference number: 4 (lower is better)
Translates to: CAGLRNPGCQDGPPRLLKLRGTG*GGTTCF
Trigger: GAAGCATGTGGTACCGCCTCAGCCAGTGCCCCTCAG...CTTCAGGAGCCGCGGGGGCCCATCCTGACACCCGGGGTTCCTCAGCCCAGCGCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR TCA 90 bp GCTGCGCGGTGCTGTAGTCGTGGCCCTGCTTCAGGTCCTGCAGGCCCCGCCAGAGCTGTCCCTTTCTGCTaGGGGGTCCCCGAGGAGAGG +
Preference number: 4 (lower is better)
Translates to: AARCCSRGPASGPAGPARAVPFC*GVPEER
Trigger: CCTCTCCTCGGGGACCCCTCAGCAGAAAGGGACAGC...TCTGGCGGGGCCTGCAGGACCTGAAGCAGGGCCACGACTACAGCACCGCGCAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000604074.5
CDS-3UTR TCA 90 bp TCGGGTAGCAGGTGCCCAGCCCCCAAGAGATGGGTGTGGTGCCTGGGGCATGGGTCCGGTTCCCTGCCCTaGAGCTGTGCTCCGGGACGG +
Preference number: 4 (lower is better)
Translates to: SGSRCPAPKRWVWCLGHGSGSLP*SCAPGR
Trigger: CCGTCCCGGAGCACAGCTTCAGGGCAGGGAACCGGA...CCCATGCCCCAGGCACCACACCCATCTCTTGGGGGCTGGGCACCTGCTACCCGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR TCA 90 bp CCCTGCTTCAGGTCCTGCAGGCCCCGCCAGATGGTCATGCGGTACTGCTCGGGGTCCGGTTCCCTGCCCTaGAGCTGTGCTCCGGGACGG +
Preference number: 4 (lower is better)
Translates to: PCFRSCRPRQMVMRYCSGSGSLP*SCAPGR
Trigger: CCGTCCCGGAGCACAGCTTCAGGGCAGGGAACCGGA...CCCCGAGCAGTACCGCATGACCATCTGGCGGGGCCTGCAGGACCTGAAGCAGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000604074.5
CDS-3UTR TCA 90 bp CCCATTGGCCCACCTGCCTGCAATGAAGGGCCTCGTCACACCCGTGAGGCCCCCGCTGCCGCTACTGACTaGTGCCCTGGGCGTGGGCAC +
Preference number: 4 (lower is better)
Translates to: PIGPPACNEGPRHTREAPAAATD*CPGRGH
Trigger: GTGCCCACGCCCAGGGCATCAGTCAGTAGCGGCAGC...GGGGGCCTCACGGGTGTGACGAGGCCCTTCATTGCAGGCAGGTGGGCCAATGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR TCA 90 bp CCCATTGGCCCACCTGCCTGCAATGAAGGGCCTCGTCACACCCGTGAGGCCCCCCGTGGCCATGGTTGTTaGGCATCCCGGGGCGGCCTC +
Preference number: 4 (lower is better)
Translates to: PIGPPACNEGPRHTREAPRGHGC*ASRGGL
Trigger: GAGGCCGCCCCGGGATGCTCAACAACCATGGCCACG...GGGGGCCTCACGGGTGTGACGAGGCCCTTCATTGCAGGCAGGTGGGCCAATGGG
69% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000357733.7
CDS-3UTR TCA 90 bp TGGGCGGTGGCGCAGGCTGCAGCCAGGCGAGGCCCTCAGTGGATCTCGGCCTCCTGCTGCTCAGCAGATTaGACTGGGCCGTGGCGAGGT +
Preference number: 4 (lower is better)
Translates to: WAVAQAAARRGPQWISASCCSAD*TGPWRG
Trigger: ACCTCGCCACGGCCCAGTTCAATCTGCTGAGCAGCA...GGAGGCCGAGATCCACTGAGGGCCTCGCCTGGCTGCAGCCTGCGCCACCGCCCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378280.5
ENST00000378285.5
CDS-3UTR GCA 90 bp CTGGAAGTCGGAGCCGACGCTGCGGTCCCCACCCACGCCTGCCATGGAGCACGCGGTGCTCAAACGTGGTaGCCCCATCAGGGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: LEVGADAAVPTHACHGARGAQTW*PHQGRW
Trigger: CCACCTCCCCTGATGGGGGCACCACGTTTGAGCACC...GCGTGCTCCATGGCAGGCGTGGGTGGGGACCGCAGCGTCGGCTCCGACTTCCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp CCTGGGCCGCCGCGGTTGGGGATGGTGATGGTGTGGCGCACGCGGAAGTGCACGGGTGCTCAAACGTGGTaGCCCCATCAGGGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: PGPPRLGMVMVWRTRKCTGAQTW*PHQGRW
Trigger: CCACCTCCCCTGATGGGGGCACCACGTTTGAGCACC...CGTGCACTTCCGCGTGCGCCACACCATCACCATCCCCAACCGCGGCGGCCCAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000354437.8
ENST00000604074.5
CDS-3UTR GCA 90 bp TCGGGTAGCAGGTGCCCAGCCCCCAAGAGATGGGTGTGGTGCCTGGGGCATGGGCCGAGGCCGCGCGGCTaGTCATCTGGTCCATGGTGC +
Preference number: 4 (lower is better)
Translates to: SGSRCPAPKRWVWCLGHGPRPRG*SSGPWC
Trigger: GCACCATGGACCAGATGAGCAGCCGCGCGGCCTCGG...CCCATGCCCCAGGCACCACACCCATCTCTTGGGGGCTGGGCACCTGCTACCCGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp CCGCCGATGGAGATGGTGGCCGCGTTGCTAGAGCGGAGCAGCTGCTGCGCGGTGGGCACCACGACGCTCTaGCTGCCGGTGACAGGGTCA +
Preference number: 4 (lower is better)
Translates to: PPMEMVAALLERSSCCAVGTTTL*LPVTGS
Trigger: TGACCCTGTCACCGGCAGGCAGAGCGTCGTGGTGCC...CACCGCGCAGCAGCTGCTCCGCTCTAGCAACGCGGCCACCATCTCCATCGGCGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR GCA 90 bp CAAGCGTGCACCCAGGCGACTGTGCTGTCAGCGGCCCCCGGGGAGGTGGACGGTTGGGCCGCCGGTTCATaGCCCCTACACAGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: QACTQATVLSAAPGEVDGWAAGS*PLHSCC
Trigger: ACAGCAGCTGTGTAGGGGGCATGAACCGGCGGCCCA...ACCGTCCACCTCCCCGGGGGCCGCTGACAGCACAGTCGCCTGGGTGCACGCTTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp CCGCCGATGGAGATGGTGGCCGCGTTGCTAGAGCGGAGCAGCTGCTGCGCGGTGCAGGACAGGCGCAGATaGGGCCCTCAAAGGACCGGC +
Preference number: 4 (lower is better)
Translates to: PPMEMVAALLERSSCCAVQDRRR*GPQRTG
Trigger: GCCGGTCCTTTGAGGGCCGCATCTGCGCCTGTCCTG...CACCGCGCAGCAGCTGCTCCGCTCTAGCAACGCGGCCACCATCTCCATCGGCGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR GCA 90 bp GCGGTGGCGCAGGCTGCAGCCAGGCGAGGCCCTCAGTGGATCTCGGCCTCCGTGGTGTCCTCGTCTCCATaGCGCCGCTTCTTCACACCG +
Preference number: 4 (lower is better)
Translates to: AVAQAAARRGPQWISASVVSSSP*RRFFTP
Trigger: CGGTGTGAAGAAGCGGCGGCATGGAGACGAGGACAC...CACGGAGGCCGAGATCCACTGAGGGCCTCGCCTGGCTGCAGCCTGCGCCACCGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR GCA 90 bp TGGGCGGTGGCGCAGGCTGCAGCCAGGCGAGGCCCTCAGTGGATCTCGGCCTCCGTGTCCTCGTCTCCATaGCGCCGCTTCTTCACACCG +
Preference number: 4 (lower is better)
Translates to: WAVAQAAARRGPQWISASVSSSP*RRFFTP
Trigger: CGGTGTGAAGAAGCGGCGGCATGGAGACGAGGACAC...GGAGGCCGAGATCCACTGAGGGCCTCGCCTGGCTGCAGCCTGCGCCACCGCCCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR GCA 90 bp GGCTGCTTGCGGGCCTTGCAGTCGGGCAGGTCGAAGCCGAAGTCCGCCCACTCGCCCTGCTTCAGGTCCTaGAGGCCCCGCCAGATGGTC +
Preference number: 4 (lower is better)
Translates to: GCLRALQSGRSKPKSAHSPCFRS*RPRQMV
Trigger: GACCATCTGGCGGGGCCTGCAGGACCTGAAGCAGGG...CGAGTGGGCGGACTTCGGCTTCGACCTGCCCGACTGCAAGGCCCGCAAGCAGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR GCA 90 bp GCCGCCGATGGAGATGGTGGCCGCGTTGCTAGAGCGGAGCAGCTGCTGCGCGGTGCAGCTGCTGCGCGGTaGTGTAGTCGTGGCCCTGCT +
Preference number: 4 (lower is better)
Translates to: AADGDGGRVARAEQLLRGAAAAR*CSRGPA
Trigger: AGCAGGGCCACGACTACAGCACCGCGCAGCAGCTGC...ACCGCGCAGCAGCTGCTCCGCTCTAGCAACGCGGCCACCATCTCCATCGGCGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR GCA 90 bp GATGGTGTGGCGCACGCGGAAGTGCACGGCCTCCATGACCCGCTGGCGCTGCAGGCAGCTGCTGCGCGGTaGTGTAGTCGTGGCCCTGCT +
Preference number: 4 (lower is better)
Translates to: DGVAHAEVHGLHDPLALQAAAAR*CSRGPA
Trigger: AGCAGGGCCACGACTACAGCACCGCGCAGCAGCTGC...CTGCAGCGCCAGCGGGTCATGGAGGCCGTGCACTTCCGCGTGCGCCACACCATC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR GCA 90 bp TCGGGTAGCAGGTGCCCAGCCCCCAAGAGATGGGTGTGGTGCCTGGGGCATGGGATGACCCGCTGGCGCTaGAGTTCCCCTGAGCCGCCG +
Preference number: 4 (lower is better)
Translates to: SGSRCPAPKRWVWCLGHGMTRWR*SSPEPP
Trigger: CGGCGGCTCAGGGGAACTGCAGCGCCAGCGGGTCAT...CCCATGCCCCAGGCACCACACCCATCTCTTGGGGGCTGGGCACCTGCTACCCGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp GCAGAGAGAGTCCCCAGCCCCCGGCGCGGGCAAGACGCAGTTAGGGACATTCCCTGGCGCACGCGGAAGTaGACGGCCTCCATGACCCGC +
Preference number: 4 (lower is better)
Translates to: AERVPSPRRGQDAVRDIPWRTRK*TASMTR
Trigger: GCGGGTCATGGAGGCCGTGCACTTCCGCGTGCGCCA...GGGAATGTCCCTAACTGCGTCTTGCCCGCGCCGGGGGCTGGGGACTCTCTCTGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp GGCCACCAAGGCTCAGGCTGCTCCTCGTGGATGGAGGTGGCCCCAGAAAGGGCCTGGCGCACGCGGAAGTaGACGGCCTCCATGACCCGC +
Preference number: 4 (lower is better)
Translates to: GHQGSGCSSWMEVAPERAWRTRK*TASMTR
Trigger: GCGGGTCATGGAGGCCGTGCACTTCCGCGTGCGCCA...GGCCCTTTCTGGGGCCACCTCCATCCACGAGGAGCAGCCTGAGCCTTGGTGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp CAGCTGCTGCGCGGTGCTGTAGTCGTGGCCCTGCTTCAGGTCCTGCAGGCCCCGGCTGCTTGCGGGCCTTaGAGTCGGGCAGGTCGAAGC +
Preference number: 4 (lower is better)
Translates to: QLLRGAVVVALLQVLQAPAACGP*SRAGRS
Trigger: GCTTCGACCTGCCCGACTGCAAGGCCCGCAAGCAGC...CGGGGCCTGCAGGACCTGAAGCAGGGCCACGACTACAGCACCGCGCAGCAGCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR GCA 90 bp TGTAGTCGTGGCCCTGCTTCAGGTCCTGCAGGCCCCGCCAGATGGTCATGCGGTGGCGGTGGCGCAGGCTaGAGCCAGGCGAGGCCCTCA +
Preference number: 4 (lower is better)
Translates to: CSRGPASGPAGPARWSCGGGGAG*SQARPS
Trigger: TGAGGGCCTCGCCTGGCTGCAGCCTGCGCCACCGCC...ACCGCATGACCATCTGGCGGGGCCTGCAGGACCTGAAGCAGGGCCACGACTACA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR GCA 90 bp GGCCTGGTGGGAACGCTGGGGGAATGGGGGAGAGTCGCTGTTTCTGACCAGAGCGGCGGTGGCGCAGGCTaGAGCCAGGCGAGGCCCTCA +
Preference number: 4 (lower is better)
Translates to: GLVGTLGEWGRVAVSDQSGGGAG*SQARPS
Trigger: TGAGGGCCTCGCCTGGCTGCAGCCTGCGCCACCGCC...GCTCTGGTCAGAAACAGCGACTCTCCCCCATTCCCCCAGCGTTCCCACCAGGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp TCGGGTAGCAGGTGCCCAGCCCCCAAGAGATGGGTGTGGTGCCTGGGGCATGGGGGATGGGCCGGACCTTaGCTTTCCCCGGGCACAGCC +
Preference number: 4 (lower is better)
Translates to: SGSRCPAPKRWVWCLGHGGWAGP*LSPGTA
Trigger: GGCTGTGCCCGGGGAAAGGCAAGGTCCGGCCCATCC...CCCATGCCCCAGGCACCACACCCATCTCTTGGGGGCTGGGCACCTGCTACCCGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp GGGTGTCAGGATGGGCCCCCGCGGCTCCTGAAGTGGAACATGGGGGAAGAGTGGAGTCGGAGCCGACGCTaGGGTCCCCACCCACGCCTG +
Preference number: 4 (lower is better)
Translates to: GCQDGPPRLLKWNMGEEWSRSRR*GPHPRL
Trigger: CAGGCGTGGGTGGGGACCGCAGCGTCGGCTCCGACT...CCACTCTTCCCCCATGTTCCACTTCAGGAGCCGCGGGGGCCCATCCTGACACCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp TCGTGGCCCTGCTTCAGGTCCTGCAGGCCCCGCCAGATGGTCATGCGGTACTGCAGTCGGAGCCGACGCTaGGGTCCCCACCCACGCCTG +
Preference number: 4 (lower is better)
Translates to: SWPCFRSCRPRQMVMRYCSRSRR*GPHPRL
Trigger: CAGGCGTGGGTGGGGACCGCAGCGTCGGCTCCGACT...GCAGTACCGCATGACCATCTGGCGGGGCCTGCAGGACCTGAAGCAGGGCCACGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000604074.5
CDS-3UTR GCA 90 bp GGCGGTGGCGCAGGCTGCAGCCAGGCGAGGCCCTCAGTGGATCTCGGCCTCCGTCTGCAGAATACAGCGTaGTGGGGGCAGAGGCCAGTC +
Preference number: 4 (lower is better)
Translates to: GGGAGCSQARPSVDLGLRLQNTA*WGQRPV
Trigger: GACTGGCCTCTGCCCCCAGCACGCTGTATTCTGCAG...ACGGAGGCCGAGATCCACTGAGGGCCTCGCCTGGCTGCAGCCTGCGCCACCGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000604074.5
CDS-3UTR GCA 90 bp TGCGCTGGGCTGAGGAACCCCGGGTGTCAGGATGGGCCCCCGCGGCTCCTGAAGCCCAGAAAGGGCCTGTaGAGACTCTGTCTCCCCGGG +
Preference number: 4 (lower is better)
Translates to: CAGLRNPGCQDGPPRLLKPRKGL*RLCLPG
Trigger: CCCGGGGAGACAGAGTCTGCACAGGCCCTTTCTGGG...CTTCAGGAGCCGCGGGGGCCCATCCTGACACCCGGGGTTCCTCAGCCCAGCGCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp TCGGGTAGCAGGTGCCCAGCCCCCAAGAGATGGGTGTGGTGCCTGGGGCATGGGGGGGCTCCGGTTCCCTaGCCTGAAGCTGTGCTCCGG +
Preference number: 4 (lower is better)
Translates to: SGSRCPAPKRWVWCLGHGGAPVP*PEAVLR
Trigger: CCGGAGCACAGCTTCAGGGCAGGGAACCGGAGCCCC...CCCATGCCCCAGGCACCACACCCATCTCTTGGGGGCTGGGCACCTGCTACCCGA
69% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp GGACCTTGCCTTTCCCCGGGCACAGCCCGAAGGTCCTGCCTCCTGAGGCAGTTTGCACCCAGGCGACTGTaGTGTCAGCGGCCCCCGGGG +
Preference number: 4 (lower is better)
Translates to: GPCLSPGTARRSCLLRQFAPRRL*CQRPPG
Trigger: CCCCGGGGGCCGCTGACAGCACAGTCGCCTGGGTGC...AAACTGCCTCAGGAGGCAGGACCTTCGGGCTGTGCCCGGGGAAAGGCAAGGTCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp GGGATGGGCCGGACCTTGCCTTTCCCCGGGCACAGCCCGAAGGTCCTGCCTCCTCTGCCCCCACAAGCGTaGACCCAGGCGACTGTGCTG +
Preference number: 4 (lower is better)
Translates to: GMGRTLPFPGHSPKVLPPLPPQA*TQATVL
Trigger: CAGCACAGTCGCCTGGGTGCACGCTTGTGGGGGCAG...AGGAGGCAGGACCTTCGGGCTGTGCCCGGGGAAAGGCAAGGTCCGGCCCATCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp GGCCACCAAGGCTCAGGCTGCTCCTCGTGGATGGAGGTGGCCCCAGAAAGGGCCTGCAGCTGGGGTGGCTaGGCCACCCTGGGAAAGCCC +
Preference number: 4 (lower is better)
Translates to: GHQGSGCSSWMEVAPERACSWGG*ATLGKP
Trigger: GGGCTTTCCCAGGGTGGCGCAGCCACCCCAGCTGCA...GGCCCTTTCTGGGGCCACCTCCATCCACGAGGAGCAGCCTGAGCCTTGGTGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp GCGGTGGCGCAGGCTGCAGCCAGGCGAGGCCCTCAGTGGATCTCGGCCTCCGTGTCTGTGCCAGGATACTaGGGGTCGGGCTCCTGGGTA +
Preference number: 4 (lower is better)
Translates to: AVAQAAARRGPQWISASVSVPGY*GSGSWV
Trigger: TACCCAGGAGCCCGACCCGCAGTATCCTGGCACAGA...CACGGAGGCCGAGATCCACTGAGGGCCTCGCCTGGCTGCAGCCTGCGCCACCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000604074.5
CDS-3UTR GCA 90 bp GGGATGGGCCGGACCTTGCCTTTCCCCGGGCACAGCCCGAAGGTCCTGCCTCCTGGGCGCTGTGGCTGCTaGTCATCTCGCCGTTGGCTG +
Preference number: 4 (lower is better)
Translates to: GMGRTLPFPGHSPKVLPPGRCGC*SSRRWL
Trigger: CAGCCAACGGCGAGATGAGCAGCAGCCACAGCGCCC...AGGAGGCAGGACCTTCGGGCTGTGCCCGGGGAAAGGCAAGGTCCGGCCCATCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354437.8
ENST00000357733.7
ENST00000378280.5
ENST00000378285.5
ENST00000378288.8
ENST00000378295.9
CDS-3UTR GCA 90 bp GCTGCTGCGCGGTGCTGTAGTCGTGGCCCTGCTTCAGGTCCTGCAGGCCCCGCCACTGGGCGCTGTGGCTaGTGCTCATCTCGCCGTTGG +
Preference number: 4 (lower is better)
Translates to: AAARCCSRGPASGPAGPATGRCG*CSSRRW
Trigger: CCAACGGCGAGATGAGCAGCAGCCACAGCGCCCAGT...GGCGGGGCCTGCAGGACCTGAAGCAGGGCCACGACTACAGCACCGCGCAGCAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
CDS-3UTR CCA 90 bp CCTGGGCCGCCGCGGTTGGGGATGGTGATGGTGTGGCGCACGCGGAAGTGCACGGCGCGGCTGCTCATCTaGTCCATGGTGCTGCTCAGC +
Preference number: 4 (lower is better)
Translates to: PGPPRLGMVMVWRTRKCTARLLI*SMVLLS
Trigger: GCTGAGCAGCACCATGGACCAGATGAGCAGCCGCGC...CGTGCACTTCCGCGTGCGCCACACCATCACCATCCCCAACCGCGGCGGCCCAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR CCA 90 bp GGGTGTCAGGATGGGCCCCCGCGGCTCCTGAAGTGGAACATGGGGGAAGAGTGGGCTGGCGGCGTGCTCTaGGGTGTAGGGGCTGGCCGA +
Preference number: 4 (lower is better)
Translates to: GCQDGPPRLLKWNMGEEWAGGVL*GVGAGR
Trigger: TCGGCCAGCCCCTACACCCCAGAGCACGCCGCCAGC...CCACTCTTCCCCCATGTTCCACTTCAGGAGCCGCGGGGGCCCATCCTGACACCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp GGGCAGGAAGGAGGCGGTCCTGCAGAATACAGCGTGCTGGGGGCAGAGGCCAGTGCTGGCGGCGTGCTCTaGGGTGTAGGGGCTGGCCGA +
Preference number: 4 (lower is better)
Translates to: GQEGGGPAEYSVLGAEASAGGVL*GVGAGR
Trigger: TCGGCCAGCCCCTACACCCCAGAGCACGCCGCCAGC...ACTGGCCTCTGCCCCCAGCACGCTGTATTCTGCAGGACCGCCTCCTTCCTGCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp GCAGAGAGAGTCCCCAGCCCCCGGCGCGGGCAAGACGCAGTTAGGGACATTCCCAGTGGGTGGGCACGCTaGCGGCGTGCTCTGGGGTGT +
Preference number: 4 (lower is better)
Translates to: AERVPSPRRGQDAVRDIPSGWAR*RRALGC
Trigger: ACACCCCAGAGCACGCCGCCAGCGTGCCCACCCACT...GGGAATGTCCCTAACTGCGTCTTGCCCGCGCCGGGGGCTGGGGACTCTCTCTGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp CTCCCCACCCGGCCTTCCTGGGAACAAGTCCCGCCCACCTGGCTTCTCACTCAGCGTAGGGCGAGTGGGTaGGCACGCTGGCGGCGTGCT +
Preference number: 4 (lower is better)
Translates to: LPTRPSWEQVPPTWLLTQRRASG*ARWRRA
Trigger: AGCACGCCGCCAGCGTGCCCACCCACTCGCCCTACG...CTGAGTGAGAAGCCAGGTGGGCGGGACTTGTTCCCAGGAAGGCCGGGTGGGGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp TGCAGTTCCCCTGAGCCGCCGATGGAGATGGTGGCCGCGTTGCTAGAGCGGAGCCGTAGGGCGAGTGGGTaGGCACGCTGGCGGCGTGCT +
Preference number: 4 (lower is better)
Translates to: CSSPEPPMEMVAALLERSRRASG*ARWRRA
Trigger: AGCACGCCGCCAGCGTGCCCACCCACTCGCCCTACG...GCTCCGCTCTAGCAACGCGGCCACCATCTCCATCGGCGGCTCAGGGGAACTGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR CCA 90 bp GCGGTTGGGGATGGTGATGGTGTGGCGCACGCGGAAGTGCACGGCCTCCATGACCGTAGGGCGAGTGGGTaGGCACGCTGGCGGCGTGCT +
Preference number: 4 (lower is better)
Translates to: AVGDGDGVAHAEVHGLHDRRASG*ARWRRA
Trigger: AGCACGCCGCCAGCGTGCCCACCCACTCGCCCTACG...GTCATGGAGGCCGTGCACTTCCGCGTGCGCCACACCATCACCATCCCCAACCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR CCA 90 bp GATGGTGTGGCGCACGCGGAAGTGCACGGCCTCCATGACCCGCTGGCGCTGCAGCAGGCGCCGGCGACATaGTGTCGAAGGTGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: DGVAHAEVHGLHDPLALQQAPAT*CRRWSW
Trigger: CCAGCTCCACCTTCGACACCATGTCGCCGGCGCCTG...CTGCAGCGCCAGCGGGTCATGGAGGCCGTGCACTTCCGCGTGCGCCACACCATC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR CCA 90 bp GTGGCGCACGCGGAAGTGCACGGCCTCCATGACCCGCTGGCGCTGCAGTTCCCCGGGAGTACGTCCAGGTaGCTGACTTGGCCGTGCTGG +
Preference number: 4 (lower is better)
Translates to: VAHAEVHGLHDPLALQFPGSTSR*LTWPCW
Trigger: CCAGCACGGCCAAGTCAGCCACCTGGACGTACTCCC...GGGGAACTGCAGCGCCAGCGGGTCATGGAGGCCGTGCACTTCCGCGTGCGCCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR CCA 90 bp GGTGCTGTAGTCGTGGCCCTGCTTCAGGTCCTGCAGGCCCCGCCAGATGGTCATCCGGATGGCGGTGCCTaGGGGTGGCGGGGTGGACAC +
Preference number: 4 (lower is better)
Translates to: GAVVVALLQVLQAPPDGHPDGGA*GWRGGH
Trigger: GTGTCCACCCCGCCACCCCCAGGCACCGCCATCCGG...ATGACCATCTGGCGGGGCCTGCAGGACCTGAAGCAGGGCCACGACTACAGCACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR CCA 90 bp AGCCAGGCGAGGCCCTCAGTGGATCTCGGCCTCCGTGAACTCCTCCTTGATGGGCCGGATGGCGGTGCCTaGGGGTGGCGGGGTGGACAC +
Preference number: 4 (lower is better)
Translates to: SQARPSVDLGLRELLLDGPDGGA*GWRGGH
Trigger: GTGTCCACCCCGCCACCCCCAGGCACCGCCATCCGG...CCCATCAAGGAGGAGTTCACGGAGGCCGAGATCCACTGAGGGCCTCGCCTGGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR CCA 90 bp GGACCTTGCCTTTCCCCGGGCACAGCCCGAAGGTCCTGCCTCCTGAGGCAGTTTCAGGCATGGCCCGGATaGCGGTGCCTGGGGGTGGCG +
Preference number: 4 (lower is better)
Translates to: GPCLSPGTARRSCLLRQFQAWPG*RCLGVA
Trigger: CGCCACCCCCAGGCACCGCCATCCGGGCCATGCCTG...AAACTGCCTCAGGAGGCAGGACCTTCGGGCTGTGCCCGGGGAAAGGCAAGGTCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000346387.8
ENST00000354437.8
ENST00000357733.7
ENST00000378280.5
ENST00000378285.5
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp TCAGGGCCGCCGCCTGGGCCGCCGCGGTTGGGGATGGTGATGGTGTGGCGCACGTCTTGTAAACAGGCATaGCCCGGATGGCGGTGCCTG +
Preference number: 4 (lower is better)
Translates to: SGPPPGPPRLGMVMVWRTSCKQA*PGWRCL
Trigger: CAGGCACCGCCATCCGGGCCATGCCTGTTTACAAGA...CGTGCGCCACACCATCACCATCCCCAACCGCGGCGGCCCAGGCGGCGGCCCTGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR CCA 90 bp GCTGCTGCGCGGTGCTGTAGTCGTGGCCCTGCTTCAGGTCCTGCAGGCCCCGCCTCCCTCCCGAGCTCGTaGTTGGGGCAGCGTTTCACG +
Preference number: 4 (lower is better)
Translates to: AAARCCSRGPASGPAGPASLPSS*LGQRFT
Trigger: CGTGAAACGCTGCCCCAACCACGAGCTCGGGAGGGA...GGCGGGGCCTGCAGGACCTGAAGCAGGGCCACGACTACAGCACCGCGCAGCAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR CCA 90 bp GCCGCCGATGGAGATGGTGGCCGCGTTGCTAGAGCGGAGCAGCTGCTGCGCGGTTGGCGGCCCCGTTCTTaGCGGAGCTCTCGTTCAGGG +
Preference number: 4 (lower is better)
Translates to: AADGDGGRVARAEQLLRGWRPRS*RSSRSG
Trigger: CCCTGAACGAGAGCTCCGCCAAGAACGGGGCCGCCA...ACCGCGCAGCAGCTGCTCCGCTCTAGCAACGCGGCCACCATCTCCATCGGCGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR CCA 90 bp GGCCACCAAGGCTCAGGCTGCTCCTCGTGGATGGAGGTGGCCCCAGAAAGGGCCCCCCTGAGCCGCCGATaGAGATGGTGGCCGCGTTGC +
Preference number: 4 (lower is better)
Translates to: GHQGSGCSSWMEVAPERAPLSRR*RWWPRC
Trigger: GCAACGCGGCCACCATCTCCATCGGCGGCTCAGGGG...GGCCCTTTCTGGGGCCACCTCCATCCACGAGGAGCAGCCTGAGCCTTGGTGGCC
69% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp GCCGCCGATGGAGATGGTGGCCGCGTTGCTAGAGCGGAGCAGCTGCTGCGCGGTGCCTCCATGACCCGCTaGCGCTGCAGTTCCCCTGAG +
Preference number: 4 (lower is better)
Translates to: AADGDGGRVARAEQLLRGASMTR*RCSSPE
Trigger: CTCAGGGGAACTGCAGCGCCAGCGGGTCATGGAGGC...ACCGCGCAGCAGCTGCTCCGCTCTAGCAACGCGGCCACCATCTCCATCGGCGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR CCA 90 bp CTGGAAGTCGGAGCCGACGCTGCGGTCCCCACCCACGCCTGCCATGGAGCACGCGGGATGGTGATGGTGTaGCGCACGCGGAAGTGCACG +
Preference number: 4 (lower is better)
Translates to: LEVGADAAVPTHACHGARGMVMV*RTRKCT
Trigger: CGTGCACTTCCGCGTGCGCCACACCATCACCATCCC...GCGTGCTCCATGGCAGGCGTGGGTGGGGACCGCAGCGTCGGCTCCGACTTCCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp TGCGCTGGGCTGAGGAACCCCGGGTGTCAGGATGGGCCCCCGCGGCTCCTGAAGGGGATGGTGATGGTGTaGCGCACGCGGAAGTGCACG +
Preference number: 4 (lower is better)
Translates to: CAGLRNPGCQDGPPRLLKGMVMV*RTRKCT
Trigger: CGTGCACTTCCGCGTGCGCCACACCATCACCATCCC...CTTCAGGAGCCGCGGGGGCCCATCCTGACACCCGGGGTTCCTCAGCCCAGCGCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp CAAGCGTGCACCCAGGCGACTGTGCTGTCAGCGGCCCCCGGGGAGGTGGACGGTAGGCGAGGCCCTCAGTaGATCTCGGCCTCCGTGAAC +
Preference number: 4 (lower is better)
Translates to: QACTQATVLSAAPGEVDGRRGPQ*ISASVN
Trigger: GTTCACGGAGGCCGAGATCCACTGAGGGCCTCGCCT...ACCGTCCACCTCCCCGGGGGCCGCTGACAGCACAGTCGCCTGGGTGCACGCTTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp CCTGCTTCAGGTCCTGCAGGCCCCGCCAGATGGTCATGCGGTACTGCTCGGGGATGGGTCTCTGGGCGGTaGCGCAGGCTGCAGCCAGGC +
Preference number: 4 (lower is better)
Translates to: PASGPAGPARWSCGTARGWVSGR*RRLQPG
Trigger: GCCTGGCTGCAGCCTGCGCCACCGCCCAGAGACCCA...TCCCCGAGCAGTACCGCATGACCATCTGGCGGGGCCTGCAGGACCTGAAGCAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR CCA 90 bp GGGCAGGAAGGAGGCGGTCCTGCAGAATACAGCGTGCTGGGGGCAGAGGCCAGTTGGGTCTCTGGGCGGTaGCGCAGGCTGCAGCCAGGC +
Preference number: 4 (lower is better)
Translates to: GQEGGGPAEYSVLGAEASWVSGR*RRLQPG
Trigger: GCCTGGCTGCAGCCTGCGCCACCGCCCAGAGACCCA...ACTGGCCTCTGCCCCCAGCACGCTGTATTCTGCAGGACCGCCTCCTTCCTGCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp GGCAGGAAGGAGGCGGTCCTGCAGAATACAGCGTGCTGGGGGCAGAGGCCAGTCTGGGTCTCTGGGCGGTaGCGCAGGCTGCAGCCAGGC +
Preference number: 4 (lower is better)
Translates to: GRKEAVLQNTACWGQRPVWVSGR*RRLQPG
Trigger: GCCTGGCTGCAGCCTGCGCCACCGCCCAGAGACCCA...GACTGGCCTCTGCCCCCAGCACGCTGTATTCTGCAGGACCGCCTCCTTCCTGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp TCGGGTAGCAGGTGCCCAGCCCCCAAGAGATGGGTGTGGTGCCTGGGGCATGGGGGCAGCTTGGGTCTCTaGGCGGTGGCGCAGGCTGCA +
Preference number: 4 (lower is better)
Translates to: SGSRCPAPKRWVWCLGHGGSLGL*AVAQAA
Trigger: TGCAGCCTGCGCCACCGCCCAGAGACCCAAGCTGCC...CCCATGCCCCAGGCACCACACCCATCTCTTGGGGGCTGGGCACCTGCTACCCGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp CCCATTGGCCCACCTGCCTGCAATGAAGGGCCTCGTCACACCCGTGAGGCCCCCGGCAGCTTGGGTCTCTaGGCGGTGGCGCAGGCTGCA +
Preference number: 4 (lower is better)
Translates to: PIGPPACNEGPRHTREAPGSLGL*AVAQAA
Trigger: TGCAGCCTGCGCCACCGCCCAGAGACCCAAGCTGCC...GGGGGCCTCACGGGTGTGACGAGGCCCTTCATTGCAGGCAGGTGGGCCAATGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp GGCCACCAAGGCTCAGGCTGCTCCTCGTGGATGGAGGTGGCCCCAGAAAGGGCCGGCGGCTTCGGTGGCTaGGCCTTTCCTGGGGCCTGT +
Preference number: 4 (lower is better)
Translates to: GHQGSGCSSWMEVAPERAGGFGG*AFPGAC
Trigger: ACAGGCCCCAGGAAAGGCCCAGCCACCGAAGCCGCC...GGCCCTTTCTGGGGCCACCTCCATCCACGAGGAGCAGCCTGAGCCTTGGTGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp ATGGTGATGGTGTGGCGCACGCGGAAGTGCACGGCCTCCATGACCCGCTGGCGCGGCGGCTTCGGTGGCTaGGCCTTTCCTGGGGCCTGT +
Preference number: 4 (lower is better)
Translates to: MVMVWRTRKCTASMTRWRGGFGG*AFPGAC
Trigger: ACAGGCCCCAGGAAAGGCCCAGCCACCGAAGCCGCC...GCGCCAGCGGGTCATGGAGGCCGTGCACTTCCGCGTGCGCCACACCATCACCAT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR CCA 90 bp GAGCAGCTGCTGCGCGGTGCTGTAGTCGTGGCCCTGCTTCAGGTCCTGCAGGCCCACAGGCGGCTTCGGTaGCTGGGCCTTTCCTGGGGC +
Preference number: 4 (lower is better)
Translates to: EQLLRGAVVVALLQVLQAHRRLR*LGLSWG
Trigger: GCCCCAGGAAAGGCCCAGCCACCGAAGCCGCCTGTG...GGCCTGCAGGACCTGAAGCAGGGCCACGACTACAGCACCGCGCAGCAGCTGCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR CCA 90 bp CTCCCCACCCGGCCTTCCTGGGAACAAGTCCCGCCCACCTGGCTTCTCACTCAGCACCCACGCCTGCCATaGAGCACGCCGGGGCAGTGG +
Preference number: 4 (lower is better)
Translates to: LPTRPSWEQVPPTWLLTQHPRLP*STPGQW
Trigger: CCACTGCCCCGGCGTGCTCCATGGCAGGCGTGGGTG...CTGAGTGAGAAGCCAGGTGGGCGGGACTTGTTCCCAGGAAGGCCGGGTGGGGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp GCTCCGGTTCCCTGCCCTGAAGCTGTGCTCCGGGACGGTCAAGGTTCGGCCACCCCCACCCGGCCTTCCTaGGAACAAGTCCCGCCCACC +
Preference number: 4 (lower is better)
Translates to: APVPCPEAVLRDGQGSATPTRPS*EQVPPT
Trigger: GGTGGGCGGGACTTGTTCCCAGGAAGGCCGGGTGGG...GGTGGCCGAACCTTGACCGTCCCGGAGCACAGCTTCAGGGCAGGGAACCGGAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp ATGGTGATGGTGTGGCGCACGCGGAAGTGCACGGCCTCCATGACCCGCTGGCGCCAGGGGGTGTGGAGCTaGCCGTGCCAGAAGGGGCCA +
Preference number: 4 (lower is better)
Translates to: MVMVWRTRKCTASMTRWRQGVWS*PCQKGP
Trigger: TGGCCCCTTCTGGCACGGCCAGCTCCACACCCCCTG...GCGCCAGCGGGTCATGGAGGCCGTGCACTTCCGCGTGCGCCACACCATCACCAT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000604074.5
CDS-3UTR CCA 90 bp GGCAGGAAGGAGGCGGTCCTGCAGAATACAGCGTGCTGGGGGCAGAGGCCAGTCGCCAGGCCCTCGCCCTaGCTGCAGCCAGATCCCCTG +
Preference number: 4 (lower is better)
Translates to: GRKEAVLQNTACWGQRPVARPSP*LQPDPL
Trigger: CAGGGGATCTGGCTGCAGCCAGGGCGAGGGCCTGGC...GACTGGCCTCTGCCCCCAGCACGCTGTATTCTGCAGGACCGCCTCCTTCCTGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp GGGATGGGCCGGACCTTGCCTTTCCCCGGGCACAGCCCGAAGGTCCTGCCTCCTGTGGCTGCGCCACCCTaGGAAAGCCCCGAGTCTGCT +
Preference number: 4 (lower is better)
Translates to: GMGRTLPFPGHSPKVLPPVAAPP*ESPESA
Trigger: AGCAGACTCGGGGCTTTCCCAGGGTGGCGCAGCCAC...AGGAGGCAGGACCTTCGGGCTGTGCCCGGGGAAAGGCAAGGTCCGGCCCATCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp GGGATGGGCCGGACCTTGCCTTTCCCCGGGCACAGCCCGAAGGTCCTGCCTCCTGAGGTGACATGCAGCTaGGGTGGCTGCGCCACCCTG +
Preference number: 4 (lower is better)
Translates to: GMGRTLPFPGHSPKVLPPEVTCS*GGCATL
Trigger: CAGGGTGGCGCAGCCACCCCAGCTGCATGTCACCTC...AGGAGGCAGGACCTTCGGGCTGTGCCCGGGGAAAGGCAAGGTCCGGCCCATCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp GGCCACCAAGGCTCAGGCTGCTCCTCGTGGATGGAGGTGGCCCCAGAAAGGGCCGGGGGCTTCAGGAGGTaGCCTCGGGTAGCAGGTGCC +
Preference number: 4 (lower is better)
Translates to: GHQGSGCSSWMEVAPERAGGFRR*PRVAGA
Trigger: GGCACCTGCTACCCGAGGCCACCTCCTGAAGCCCCC...GGCCCTTTCTGGGGCCACCTCCATCCACGAGGAGCAGCCTGAGCCTTGGTGGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp CTCCCCACCCGGCCTTCCTGGGAACAAGTCCCGCCCACCTGGCTTCTCACTCAGCCCCGGGTGTCAGGATaGGCCCCCGCGGCTCCTGAA +
Preference number: 4 (lower is better)
Translates to: LPTRPSWEQVPPTWLLTQPRVSG*APAAPE
Trigger: TTCAGGAGCCGCGGGGGCCCATCCTGACACCCGGGG...CTGAGTGAGAAGCCAGGTGGGCGGGACTTGTTCCCAGGAAGGCCGGGTGGGGAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp CTTCAGGAGGTGGCCTCGGGTAGCAGGTGCCCAGCCCCCAAGAGATGGGTGTGGCCCCGGGTGTCAGGATaGGCCCCCGCGGCTCCTGAA +
Preference number: 4 (lower is better)
Translates to: LQEVASGSRCPAPKRWVWPRVSG*APAAPE
Trigger: TTCAGGAGCCGCGGGGGCCCATCCTGACACCCGGGG...CCACACCCATCTCTTGGGGGCTGGGCACCTGCTACCCGAGGCCACCTCCTGAAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp CAAGCGTGCACCCAGGCGACTGTGCTGTCAGCGGCCCCCGGGGAGGTGGACGGTGAAGCACATCTGCGCTaGGCTGAGGAACCCCGGGTG +
Preference number: 4 (lower is better)
Translates to: QACTQATVLSAAPGEVDGEAHLR*AEEPRV
Trigger: CACCCGGGGTTCCTCAGCCCAGCGCAGATGTGCTTC...ACCGTCCACCTCCCCGGGGGCCGCTGACAGCACAGTCGCCTGGGTGCACGCTTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp GTGTGGCGCACGCGGAAGTGCACGGCCTCCATGACCCGCTGGCGCTGCAGTTCCGCAGCTGGGGCCATCTaGCTGCTCCGTGTTCTGGCC +
Preference number: 4 (lower is better)
Translates to: VWRTRKCTASMTRWRCSSAAGAI*LLRVLA
Trigger: GGCCAGAACACGGAGCAGCCAGATGGCCCCAGCTGC...GGAACTGCAGCGCCAGCGGGTCATGGAGGCCGTGCACTTCCGCGTGCGCCACAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000604074.5
CDS-3UTR CCA 90 bp CTGGAAGTCGGAGCCGACGCTGCGGTCCCCACCCACGCCTGCCATGGAGCACGCCTAGACAGGTGCAGCTaGGGCCATCTGGCTGCTCCG +
Preference number: 4 (lower is better)
Translates to: LEVGADAAVPTHACHGARLDRCS*GHLAAP
Trigger: CGGAGCAGCCAGATGGCCCCAGCTGCACCTGTCTAG...GCGTGCTCCATGGCAGGCGTGGGTGGGGACCGCAGCGTCGGCTCCGACTTCCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp GGGATGGGCCGGACCTTGCCTTTCCCCGGGCACAGCCCGAAGGTCCTGCCTCCTTGCGGGTCGGGCTCCTaGGTACAGCAAGGGCTTCCC +
Preference number: 4 (lower is better)
Translates to: GMGRTLPFPGHSPKVLPPCGSGS*VQQGLP
Trigger: GGGAAGCCCTTGCTGTACCCAGGAGCCCGACCCGCA...AGGAGGCAGGACCTTCGGGCTGTGCCCGGGGAAAGGCAAGGTCCGGCCCATCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp GTGGCGCACGCGGAAGTGCACGGCCTCCATGACCCGCTGGCGCTGCAGTTCCCCCGTGCACCTTGTTCATaGGCGAGAGGACCGGCCCGT +
Preference number: 4 (lower is better)
Translates to: VAHAEVHGLHDPLALQFPRAPCS*ARGPAR
Trigger: ACGGGCCGGTCCTCTCGCCCATGAACAAGGTGCACG...GGGGAACTGCAGCGCCAGCGGGTCATGGAGGCCGTGCACTTCCGCGTGCGCCAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354437.8
ENST00000378285.5
CDS-3UTR CCA 90 bp TGCGCTGGGCTGAGGAACCCCGGGTGTCAGGATGGGCCCCCGCGGCTCCTGAAGGGCACTGCGTGGCCATaGTTGTTGAGCATCCCGGGG +
Preference number: 4 (lower is better)
Translates to: CAGLRNPGCQDGPPRLLKGTAWP*LLSIPG
Trigger: CCCCGGGATGCTCAACAACCATGGCCACGCAGTGCC...CTTCAGGAGCCGCGGGGGCCCATCCTGACACCCGGGGTTCCTCAGCCCAGCGCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
CDS-3UTR CCA 90 bp CTTGGGTCTCTGGGCGGTGGCGCAGGCTGCAGCCAGGCGAGGCCCTCAGTGGATCCCGAGACCATGGACTaGGCGCTGTGGCTGCTGCTC +
Preference number: 4 (lower is better)
Translates to: LGSLGGGAGCSQARPSVDPETMD*ALWLLL
Trigger: GAGCAGCAGCCACAGCGCCCAGTCCATGGTCTCGGG...ATCCACTGAGGGCCTCGCCTGGCTGCAGCCTGCGCCACCGCCCAGAGACCCAAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
CDS-3UTR CCA 90 bp GCTCCGGTTCCCTGCCCTGAAGCTGTGCTCCGGGACGGTCAAGGTTCGGCCACCGGGACCCCGAGACCATaGACTGGGCGCTGTGGCTGC +
Preference number: 4 (lower is better)
Translates to: APVPCPEAVLRDGQGSATGTPRP*TGRCGC
Trigger: GCAGCCACAGCGCCCAGTCCATGGTCTCGGGGTCCC...GGTGGCCGAACCTTGACCGTCCCGGAGCACAGCTTCAGGGCAGGGAACCGGAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
CDS-3UTR CCA 90 bp GGGGATGGTGATGGTGTGGCGCACGCGGAAGTGCACGGCCTCCATGACCCGCTGGGGACCCCGAGACCATaGACTGGGCGCTGTGGCTGC +
Preference number: 4 (lower is better)
Translates to: GDGDGVAHAEVHGLHDPLGTPRP*TGRCGC
Trigger: GCAGCCACAGCGCCCAGTCCATGGTCTCGGGGTCCC...CAGCGGGTCATGGAGGCCGTGCACTTCCGCGTGCGCCACACCATCACCATCCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
CDS-3UTR CCA 90 bp GGCTGCTTGCGGGCCTTGCAGTCGGGCAGGTCGAAGCCGAAGTCCGCCCACTCGGGTGGCGGAGTGCAGTaGGACCCCGAGACCATGGAC +
Preference number: 4 (lower is better)
Translates to: GCLRALQSGRSKPKSAHSGGGVQ*DPETMD
Trigger: GTCCATGGTCTCGGGGTCCCACTGCACTCCGCCACC...CGAGTGGGCGGACTTCGGCTTCGACCTGCCCGACTGCAAGGCCCGCAAGCAGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
CDS-3UTR CCA 90 bp CCCATTGGCCCACCTGCCTGCAATGAAGGGCCTCGTCACACCCGTGAGGCCCCCGACGAGGCATGGATCTaGGCGGCCCGAGGGGAAGGG +
Preference number: 4 (lower is better)
Translates to: PIGPPACNEGPRHTREAPDEAWI*AARGEG
Trigger: CCCTTCCCCTCGGGCCGCCCAGATCCATGCCTCGTC...GGGGGCCTCACGGGTGTGACGAGGCCCTTCATTGCAGGCAGGTGGGCCAATGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378288.8
CDS-3UTR TCA 90 bp GGCGGTGGCGCAGGCTGCAGCCAGGCGAGGCCCTCAGTGGATCTCGGCCTCCGTCAGACTGTCCTTCGTTaGAGTCCCTCCCGAGCTCGT +
Preference number: 4 (lower is better)
Translates to: GGGAGCSQARPSVDLGLRQTVLR*SPSRAR
Trigger: ACGAGCTCGGGAGGGACTTCAACGAAGGACAGTCTG...ACGGAGGCCGAGATCCACTGAGGGCCTCGCCTGGCTGCAGCCTGCGCCACCGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR TCA 90 bp TCGGGTAGCAGGTGCCCAGCCCCCAAGAGATGGGTGTGGTGCCTGGGGCATGGGTGCCTTCCACGCGGATaGGGTGGCTGGCTGGAGCAG +
Preference number: 4 (lower is better)
Translates to: SGSRCPAPKRWVWCLGHGCLPRG*GGWLEQ
Trigger: CTGCTCCAGCCAGCCACCTCATCCGCGTGGAAGGCA...CCCATGCCCCAGGCACCACACCCATCTCTTGGGGGCTGGGCACCTGCTACCCGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR TCA 90 bp TCGGGCAGGTCGAAGCCGAAGTCCGCCCACTCGTCAGGGCCGCCGCCTGGGCCGTGTACAGGATGGTGGTaGATTCCGTCCCCACCTGTG +
Preference number: 4 (lower is better)
Translates to: SGRSKPKSAHSSGPPPGPCTGWW*IPSPPV
Trigger: CACAGGTGGGGACGGAATTCACCACCATCCTGTACA...CGGCCCAGGCGGCGGCCCTGACGAGTGGGCGGACTTCGGCTTCGACCTGCCCGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR TCA 90 bp TCGGGTAGCAGGTGCCCAGCCCCCAAGAGATGGGTGTGGTGCCTGGGGCATGGGGCGCTGCAGTTCCCCTaGGCCGCCGATGGAGATGGT +
Preference number: 4 (lower is better)
Translates to: SGSRCPAPKRWVWCLGHGALQFP*AADGDG
Trigger: ACCATCTCCATCGGCGGCTCAGGGGAACTGCAGCGC...CCCATGCCCCAGGCACCACACCCATCTCTTGGGGGCTGGGCACCTGCTACCCGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR TCA 90 bp GAGCAGCTGCTGCGCGGTGCTGTAGTCGTGGCCCTGCTTCAGGTCCTGCAGGCCAGTGCACGGCCTCCATaGCCCGCTGGCGCTGCAGTT +
Preference number: 4 (lower is better)
Translates to: EQLLRGAVVVALLQVLQASARPP*PAGAAV
Trigger: AACTGCAGCGCCAGCGGGTCATGGAGGCCGTGCACT...GGCCTGCAGGACCTGAAGCAGGGCCACGACTACAGCACCGCGCAGCAGCTGCTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR TCA 90 bp CTCCCCACCCGGCCTTCCTGGGAACAAGTCCCGCCCACCTGGCTTCTCACTCAGCGCGGTTGGGGATGGTaGTGGTGTGGCGCACGCGGA +
Preference number: 4 (lower is better)
Translates to: LPTRPSWEQVPPTWLLTQRGWGW*WCGARG
Trigger: TCCGCGTGCGCCACACCATCACCATCCCCAACCGCG...CTGAGTGAGAAGCCAGGTGGGCGGGACTTGTTCCCAGGAAGGCCGGGTGGGGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR TCA 90 bp GCAGAGAGAGTCCCCAGCCCCCGGCGCGGGCAAGACGCAGTTAGGGACATTCCCGCTGTCCCTTTCTGCTaGGGGGTCCCCGAGGAGAGG +
Preference number: 4 (lower is better)
Translates to: AERVPSPRRGQDAVRDIPAVPFC*GVPEER
Trigger: CCTCTCCTCGGGGACCCCTCAGCAGAAAGGGACAGC...GGGAATGTCCCTAACTGCGTCTTGCCCGCGCCGGGGGCTGGGGACTCTCTCTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR TCA 90 bp GGCAGGAAGGAGGCGGTCCTGCAGAATACAGCGTGCTGGGGGCAGAGGCCAGTCGCTGCCGCTACTGACTaGTGCCCTGGGCGTGGGCAC +
Preference number: 4 (lower is better)
Translates to: GRKEAVLQNTACWGQRPVAAATD*CPGRGH
Trigger: GTGCCCACGCCCAGGGCATCAGTCAGTAGCGGCAGC...GACTGGCCTCTGCCCCCAGCACGCTGTATTCTGCAGGACCGCCTCCTTCCTGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR TCA 90 bp CTGGAAGTCGGAGCCGACGCTGCGGTCCCCACCCACGCCTGCCATGGAGCACGCGATGGAGAGCTGAGGTaGCATGCAGCTGGGGTGGCT +
Preference number: 4 (lower is better)
Translates to: LEVGADAAVPTHACHGARDGELR*HAAGVA
Trigger: AGCCACCCCAGCTGCATGTCACCTCAGCTCTCCATC...GCGTGCTCCATGGCAGGCGTGGGTGGGGACCGCAGCGTCGGCTCCGACTTCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR TCA 90 bp CAAGCGTGCACCCAGGCGACTGTGCTGTCAGCGGCCCCCGGGGAGGTGGACGGTGATGGAGAGCTGAGGTaGCATGCAGCTGGGGTGGCT +
Preference number: 4 (lower is better)
Translates to: QACTQATVLSAAPGEVDGDGELR*HAAGVA
Trigger: AGCCACCCCAGCTGCATGTCACCTCAGCTCTCCATC...ACCGTCCACCTCCCCGGGGGCCGCTGACAGCACAGTCGCCTGGGTGCACGCTTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR TCA 90 bp CAAGCGTGCACCCAGGCGACTGTGCTGTCAGCGGCCCCCGGGGAGGTGGACGGTCGACTTGGACAGATGTaGGCTGACCTGCCTGGCGAG +
Preference number: 4 (lower is better)
Translates to: QACTQATVLSAAPGEVDGRLGQM*ADLPGE
Trigger: CTCGCCAGGCAGGTCAGCTCACATCTGTCCAAGTCG...ACCGTCCACCTCCCCGGGGGCCGCTGACAGCACAGTCGCCTGGGTGCACGCTTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR TCA 90 bp GATGGTGTGGCGCACGCGGAAGTGCACGGCCTCCATGACCCGCTGGCGCTGCAGGGCCCACCAGCTGGTTaGCGGAGGGCAGCTTGTTCA +
Preference number: 4 (lower is better)
Translates to: DGVAHAEVHGLHDPLALQGPPAG*RRAACS
Trigger: TGAACAAGCTGCCCTCCGTCAACCAGCTGGTGGGCC...CTGCAGCGCCAGCGGGTCATGGAGGCCGTGCACTTCCGCGTGCGCCACACCATC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354437.8
ENST00000378285.5
CDS-3UTR TCA 90 bp GCCGCCGATGGAGATGGTGGCCGCGTTGCTAGAGCGGAGCAGCTGCTGCGCGGTGGCCCACCAGCTGGTTaGCGGAGGGCAGCTTGTTCA +
Preference number: 4 (lower is better)
Translates to: AADGDGGRVARAEQLLRGGPPAG*RRAACS
Trigger: TGAACAAGCTGCCCTCCGTCAACCAGCTGGTGGGCC...ACCGCGCAGCAGCTGCTCCGCTCTAGCAACGCGGCCACCATCTCCATCGGCGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354437.8
ENST00000378285.5
CDS-3UTR GCA 90 bp TCGGGTAGCAGGTGCCCAGCCCCCAAGAGATGGGTGTGGTGCCTGGGGCATGGGGGCACCACGACGCTCTaGCTGCCGGTGACAGGGTCA +
Preference number: 4 (lower is better)
Translates to: SGSRCPAPKRWVWCLGHGGTTTL*LPVTGS
Trigger: TGACCCTGTCACCGGCAGGCAGAGCGTCGTGGTGCC...CCCATGCCCCAGGCACCACACCCATCTCTTGGGGGCTGGGCACCTGCTACCCGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp CCCATTGGCCCACCTGCCTGCAATGAAGGGCCTCGTCACACCCGTGAGGCCCCCCAGGACAGGCGCAGATaGGGCCCTCAAAGGACCGGC +
Preference number: 4 (lower is better)
Translates to: PIGPPACNEGPRHTREAPQDRRR*GPQRTG
Trigger: GCCGGTCCTTTGAGGGCCGCATCTGCGCCTGTCCTG...GGGGGCCTCACGGGTGTGACGAGGCCCTTCATTGCAGGCAGGTGGGCCAATGGG
68% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp GGGCCTTGCAGTCGGGCAGGTCGAAGCCGAAGTCCGCCCACTCGTCAGGGCCGCGAGTCCACCAGTGGCTaGGGCACCAACTCCATCAGC +
Preference number: 4 (lower is better)
Translates to: GPCSRAGRSRSPPTRQGRESTSG*GTNSIS
Trigger: GCTGATGGAGTTGGTGCCGCAGCCACTGGTGGACTC...GCGGCCCTGACGAGTGGGCGGACTTCGGCTTCGACCTGCCCGACTGCAAGGCCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR GCA 90 bp GGCCACCAAGGCTCAGGCTGCTCCTCGTGGATGGAGGTGGCCCCAGAAAGGGCCCCCTGCTTCAGGTCCTaGAGGCCCCGCCAGATGGTC +
Preference number: 4 (lower is better)
Translates to: GHQGSGCSSWMEVAPERAPCFRS*RPRQMV
Trigger: GACCATCTGGCGGGGCCTGCAGGACCTGAAGCAGGG...GGCCCTTTCTGGGGCCACCTCCATCCACGAGGAGCAGCCTGAGCCTTGGTGGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp GCTCCGGTTCCCTGCCCTGAAGCTGTGCTCCGGGACGGTCAAGGTTCGGCCACCGCAGCTGCTGCGCGGTaGTGTAGTCGTGGCCCTGCT +
Preference number: 4 (lower is better)
Translates to: APVPCPEAVLRDGQGSATAAAAR*CSRGPA
Trigger: AGCAGGGCCACGACTACAGCACCGCGCAGCAGCTGC...GGTGGCCGAACCTTGACCGTCCCGGAGCACAGCTTCAGGGCAGGGAACCGGAGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp GGGTGTCAGGATGGGCCCCCGCGGCTCCTGAAGTGGAACATGGGGGAAGAGTGGATGACCCGCTGGCGCTaGAGTTCCCCTGAGCCGCCG +
Preference number: 4 (lower is better)
Translates to: GCQDGPPRLLKWNMGEEWMTRWR*SSPEPP
Trigger: CGGCGGCTCAGGGGAACTGCAGCGCCAGCGGGTCAT...CCACTCTTCCCCCATGTTCCACTTCAGGAGCCGCGGGGGCCCATCCTGACACCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp CCCATTGGCCCACCTGCCTGCAATGAAGGGCCTCGTCACACCCGTGAGGCCCCCGCTGCTTGCGGGCCTTaGAGTCGGGCAGGTCGAAGC +
Preference number: 4 (lower is better)
Translates to: PIGPPACNEGPRHTREAPAACGP*SRAGRS
Trigger: GCTTCGACCTGCCCGACTGCAAGGCCCGCAAGCAGC...GGGGGCCTCACGGGTGTGACGAGGCCCTTCATTGCAGGCAGGTGGGCCAATGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp CCCTGCTTCAGGTCCTGCAGGCCCCGCCAGATGGTCATGCGGTACTGCTCGGGGGCTGCTTGCGGGCCTTaGAGTCGGGCAGGTCGAAGC +
Preference number: 4 (lower is better)
Translates to: PCFRSCRPRQMVMRYCSGAACGP*SRAGRS
Trigger: GCTTCGACCTGCCCGACTGCAAGGCCCGCAAGCAGC...CCCCGAGCAGTACCGCATGACCATCTGGCGGGGCCTGCAGGACCTGAAGCAGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR GCA 90 bp CTCCCCACCCGGCCTTCCTGGGAACAAGTCCCGCCCACCTGGCTTCTCACTCAGGGATGGGCCGGACCTTaGCTTTCCCCGGGCACAGCC +
Preference number: 4 (lower is better)
Translates to: LPTRPSWEQVPPTWLLTQGWAGP*LSPGTA
Trigger: GGCTGTGCCCGGGGAAAGGCAAGGTCCGGCCCATCC...CTGAGTGAGAAGCCAGGTGGGCGGGACTTGTTCCCAGGAAGGCCGGGTGGGGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp GGACGGTGGGAGAGGGATGCCTGCGTCTTCGTAGACCAGGTACCTGCGGCAACAGTCCCCACCCACGCCTaGCATGGAGCACGCCGGGGC +
Preference number: 4 (lower is better)
Translates to: GRWERDACVFVDQVPAATVPTHA*HGARRG
Trigger: GCCCCGGCGTGCTCCATGGCAGGCGTGGGTGGGGAC...TGTTGCCGCAGGTACCTGGTCTACGAAGACGCAGGCATCCCTCTCCCACCGTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp CCTGCACTCTGGGTGGTGTCTCGGCTTGCGTGGGTGAGGGCTCCCATTGGCCCAGGGGCTCCGGTTCCCTaGCCTGAAGCTGTGCTCCGG +
Preference number: 4 (lower is better)
Translates to: PALWVVSRLAWVRAPIGPGAPVP*PEAVLR
Trigger: CCGGAGCACAGCTTCAGGGCAGGGAACCGGAGCCCC...TGGGCCAATGGGAGCCCTCACCCACGCAAGCCGAGACACCACCCAGAGTGCAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp GGCCACCAAGGCTCAGGCTGCTCCTCGTGGATGGAGGTGGCCCCAGAAAGGGCCCTGCCCCCACAAGCGTaGACCCAGGCGACTGTGCTG +
Preference number: 4 (lower is better)
Translates to: GHQGSGCSSWMEVAPERALPPQA*TQATVL
Trigger: CAGCACAGTCGCCTGGGTGCACGCTTGTGGGGGCAG...GGCCCTTTCTGGGGCCACCTCCATCCACGAGGAGCAGCCTGAGCCTTGGTGGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp CTCCCCACCCGGCCTTCCTGGGAACAAGTCCCGCCCACCTGGCTTCTCACTCAGCAGCCCCGTTCCTGCTaGCCCCACAAGCGTGCACCC +
Preference number: 4 (lower is better)
Translates to: LPTRPSWEQVPPTWLLTQQPRSC*PHKRAP
Trigger: GGGTGCACGCTTGTGGGGGCAGCAGGAACGGGGCTG...CTGAGTGAGAAGCCAGGTGGGCGGGACTTGTTCCCAGGAAGGCCGGGTGGGGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp GCTCCGGTTCCCTGCCCTGAAGCTGTGCTCCGGGACGGTCAAGGTTCGGCCACCCTGGGGCCATCTGGCTaGTCCGTGTTCTGGCCGGCT +
Preference number: 4 (lower is better)
Translates to: APVPCPEAVLRDGQGSATLGPSG*SVFWPA
Trigger: AGCCGGCCAGAACACGGAGCAGCCAGATGGCCCCAG...GGTGGCCGAACCTTGACCGTCCCGGAGCACAGCTTCAGGGCAGGGAACCGGAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp TGCGCTGGGCTGAGGAACCCCGGGTGTCAGGATGGGCCCCCGCGGCTCCTGAAGTCTGTGCCAGGATACTaGGGGTCGGGCTCCTGGGTA +
Preference number: 4 (lower is better)
Translates to: CAGLRNPGCQDGPPRLLKSVPGY*GSGSWV
Trigger: TACCCAGGAGCCCGACCCGCAGTATCCTGGCACAGA...CTTCAGGAGCCGCGGGGGCCCATCCTGACACCCGGGGTTCCTCAGCCCAGCGCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp GGCTGCTTGCGGGCCTTGCAGTCGGGCAGGTCGAAGCCGAAGTCCGCCCACTCGCAGGTTGGGTGTAGCTaGCGAACTGTGCGGGGGAGG +
Preference number: 4 (lower is better)
Translates to: GCLRALQSGRSKPKSAHSQVGCS*RTVRGR
Trigger: CCTCCCCCGCACAGTTCGGCAGCTACACCCAACCTG...CGAGTGGGCGGACTTCGGCTTCGACCTGCCCGACTGCAAGGCCCGCAAGCAGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354437.8
ENST00000378285.5
CDS-3UTR GCA 90 bp GCCTTGCAGTCGGGCAGGTCGAAGCCGAAGTCCGCCCACTCGTCAGGGCCGCCGGCCGTTGGCTGGCACTaGGTGGCCATGGTTGTTGAG +
Preference number: 4 (lower is better)
Translates to: ALQSGRSKPKSAHSSGPPAVGWH*VAMVVE
Trigger: CTCAACAACCATGGCCACGCAGTGCCAGCCAACGGC...CGGCGGCCCTGACGAGTGGGCGGACTTCGGCTTCGACCTGCCCGACTGCAAGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
CDS-3UTR GCA 90 bp GGCTGCTTGCGGGCCTTGCAGTCGGGCAGGTCGAAGCCGAAGTCCGCCCACTCGACTGGGCGCTGTGGCTaGTGCTCATCTCGCCGTTGG +
Preference number: 4 (lower is better)
Translates to: GCLRALQSGRSKPKSAHSTGRCG*CSSRRW
Trigger: CCAACGGCGAGATGAGCAGCAGCCACAGCGCCCAGT...CGAGTGGGCGGACTTCGGCTTCGACCTGCCCGACTGCAAGGCCCGCAAGCAGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
CDS-3UTR CCA 90 bp GCCTTGCAGTCGGGCAGGTCGAAGCCGAAGTCCGCCCACTCGTCAGGGCCGCCGAGAGGTGCTCAAACGTaGTGCCCCCATCAGGGGAGG +
Preference number: 4 (lower is better)
Translates to: ALQSGRSKPKSAHSSGPPRGAQT*CPHQGR
Trigger: CCTCCCCTGATGGGGGCACCACGTTTGAGCACCTCT...CGGCGGCCCTGACGAGTGGGCGGACTTCGGCTTCGACCTGCCCGACTGCAAGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354437.8
ENST00000604074.5
CDS-3UTR CCA 90 bp GGGATGGGCCGGACCTTGCCTTTCCCCGGGCACAGCCCGAAGGTCCTGCCTCCTGCGCGGCTGCTCATCTaGTCCATGGTGCTGCTCAGC +
Preference number: 4 (lower is better)
Translates to: GMGRTLPFPGHSPKVLPPARLLI*SMVLLS
Trigger: GCTGAGCAGCACCATGGACCAGATGAGCAGCCGCGC...AGGAGGCAGGACCTTCGGGCTGTGCCCGGGGAAAGGCAAGGTCCGGCCCATCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000346387.8
ENST00000354437.8
ENST00000357733.7
ENST00000378280.5
ENST00000378285.5
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp GTGCTCCGGGACGGTCAAGGTTCGGCCACCAAGGCTCAGGCTGCTCCTCGTGGAAGTGGGTGGGCACGCTaGCGGCGTGCTCTGGGGTGT +
Preference number: 4 (lower is better)
Translates to: VLRDGQGSATKAQAAPRGSGWAR*RRALGC
Trigger: ACACCCCAGAGCACGCCGCCAGCGTGCCCACCCACT...TCCACGAGGAGCAGCCTGAGCCTTGGTGGCCGAACCTTGACCGTCCCGGAGCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp TGCAGTTCCCCTGAGCCGCCGATGGAGATGGTGGCCGCGTTGCTAGAGCGGAGCAGTGGGTGGGCACGCTaGCGGCGTGCTCTGGGGTGT +
Preference number: 4 (lower is better)
Translates to: CSSPEPPMEMVAALLERSSGWAR*RRALGC
Trigger: ACACCCCAGAGCACGCCGCCAGCGTGCCCACCCACT...GCTCCGCTCTAGCAACGCGGCCACCATCTCCATCGGCGGCTCAGGGGAACTGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR CCA 90 bp AGCCAGGCGAGGCCCTCAGTGGATCTCGGCCTCCGTGAACTCCTCCTTGATGGGCGTAGGGCGAGTGGGTaGGCACGCTGGCGGCGTGCT +
Preference number: 4 (lower is better)
Translates to: SQARPSVDLGLRELLLDGRRASG*ARWRRA
Trigger: AGCACGCCGCCAGCGTGCCCACCCACTCGCCCTACG...CCCATCAAGGAGGAGTTCACGGAGGCCGAGATCCACTGAGGGCCTCGCCTGGCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR CCA 90 bp GGGATGGGCCGGACCTTGCCTTTCCCCGGGCACAGCCCGAAGGTCCTGCCTCCTGGGAGTACGTCCAGGTaGCTGACTTGGCCGTGCTGG +
Preference number: 4 (lower is better)
Translates to: GMGRTLPFPGHSPKVLPPGSTSR*LTWPCW
Trigger: CCAGCACGGCCAAGTCAGCCACCTGGACGTACTCCC...AGGAGGCAGGACCTTCGGGCTGTGCCCGGGGAAAGGCAAGGTCCGGCCCATCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000346387.8
ENST00000354437.8
ENST00000357733.7
ENST00000378280.5
ENST00000378285.5
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp AGAGCGGAGCAGCTGCTGCGCGGTGCTGTAGTCGTGGCCCTGCTTCAGGTCCTGGGCGGTGCCTGGGGGTaGCGGGGTGGACACCTTGAT +
Preference number: 4 (lower is better)
Translates to: RAEQLLRGAVVVALLQVLGGAWG*RGGHLD
Trigger: ATCAAGGTGTCCACCCCGCCACCCCCAGGCACCGCC...CAGGACCTGAAGCAGGGCCACGACTACAGCACCGCGCAGCAGCTGCTCCGCTCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR CCA 90 bp GGGCAGGAAGGAGGCGGTCCTGCAGAATACAGCGTGCTGGGGGCAGAGGCCAGTGGCGGTGCCTGGGGGTaGCGGGGTGGACACCTTGAT +
Preference number: 4 (lower is better)
Translates to: GQEGGGPAEYSVLGAEASGGAWG*RGGHLD
Trigger: ATCAAGGTGTCCACCCCGCCACCCCCAGGCACCGCC...ACTGGCCTCTGCCCCCAGCACGCTGTATTCTGCAGGACCGCCTCCTTCCTGCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp CCTGCTTCAGGTCCTGCAGGCCCCGCCAGATGGTCATGCGGTACTGCTCGGGGAGGCGGTGCCTGGGGGTaGCGGGGTGGACACCTTGAT +
Preference number: 4 (lower is better)
Translates to: PASGPAGPARWSCGTARGGGAWG*RGGHLD
Trigger: ATCAAGGTGTCCACCCCGCCACCCCCAGGCACCGCC...TCCCCGAGCAGTACCGCATGACCATCTGGCGGGGCCTGCAGGACCTGAAGCAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR CCA 90 bp GGCGGTGGCGCAGGCTGCAGCCAGGCGAGGCCCTCAGTGGATCTCGGCCTCCGTTCTTGTAAACAGGCATaGCCCGGATGGCGGTGCCTG +
Preference number: 4 (lower is better)
Translates to: GGGAGCSQARPSVDLGLRSCKQA*PGWRCL
Trigger: CAGGCACCGCCATCCGGGCCATGCCTGTTTACAAGA...ACGGAGGCCGAGATCCACTGAGGGCCTCGCCTGGCTGCAGCCTGCGCCACCGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR CCA 90 bp CAAGCGTGCACCCAGGCGACTGTGCTGTCAGCGGCCCCCGGGGAGGTGGACGGTTCCCGAGCTCGTGGTTaGGGCAGCGTTTCACGACGT +
Preference number: 4 (lower is better)
Translates to: QACTQATVLSAAPGEVDGSRARG*GSVSRR
Trigger: ACGTCGTGAAACGCTGCCCCAACCACGAGCTCGGGA...ACCGTCCACCTCCCCGGGGGCCGCTGACAGCACAGTCGCCTGGGTGCACGCTTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp CCTTGCAGTCGGGCAGGTCGAAGCCGAAGTCCGCCCACTCGTCAGGGCCGCCGCTCCCGAGCTCGTGGTTaGGGCAGCGTTTCACGACGT +
Preference number: 4 (lower is better)
Translates to: PCSRAGRSRSPPTRQGRRSRARG*GSVSRR
Trigger: ACGTCGTGAAACGCTGCCCCAACCACGAGCTCGGGA...GCGGCGGCCCTGACGAGTGGGCGGACTTCGGCTTCGACCTGCCCGACTGCAAGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR CCA 90 bp GGGCCTTGCAGTCGGGCAGGTCGAAGCCGAAGTCCGCCCACTCGTCAGGGCCGCTCCACGCGGATGAGGTaGCTGGCTGGAGCAGACTGT +
Preference number: 4 (lower is better)
Translates to: GPCSRAGRSRSPPTRQGRSTRMR*LAGADC
Trigger: ACAGTCTGCTCCAGCCAGCCACCTCATCCGCGTGGA...GCGGCCCTGACGAGTGGGCGGACTTCGGCTTCGACCTGCCCGACTGCAAGGCCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR CCA 90 bp CAGCTGCTGCGCGGTGCTGTAGTCGTGGCCCTGCTTCAGGTCCTGCAGGCCCCGCGTCCCCACCTGTGGTaGCTCATAGGGCACCACGAC +
Preference number: 4 (lower is better)
Translates to: QLLRGAVVVALLQVLQAPRPHLW*LIGHHD
Trigger: GTCGTGGTGCCCTATGAGCCACCACAGGTGGGGACG...CGGGGCCTGCAGGACCTGAAGCAGGGCCACGACTACAGCACCGCGCAGCAGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR CCA 90 bp GGGATGGGCCGGACCTTGCCTTTCCCCGGGCACAGCCCGAAGGTCCTGCCTCCTCGTCCCCACCTGTGGTaGCTCATAGGGCACCACGAC +
Preference number: 4 (lower is better)
Translates to: GMGRTLPFPGHSPKVLPPRPHLW*LIGHHD
Trigger: GTCGTGGTGCCCTATGAGCCACCACAGGTGGGGACG...AGGAGGCAGGACCTTCGGGCTGTGCCCGGGGAAAGGCAAGGTCCGGCCCATCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000346387.8
ENST00000354437.8
ENST00000357733.7
ENST00000378280.5
ENST00000378285.5
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp TGCGCTGGGCTGAGGAACCCCGGGTGTCAGGATGGGCCCCCGCGGCTCCTGAAGTTCCGTCCCCACCTGTaGTGGCTCATAGGGCACCAC +
Preference number: 4 (lower is better)
Translates to: CAGLRNPGCQDGPPRLLKFRPHL*WLIGHH
Trigger: GTGGTGCCCTATGAGCCACCACAGGTGGGGACGGAA...CTTCAGGAGCCGCGGGGGCCCATCCTGACACCCGGGGTTCCTCAGCCCAGCGCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp CCCATTGGCCCACCTGCCTGCAATGAAGGGCCTCGTCACACCCGTGAGGCCCCCTGGCGGCCCCGTTCTTaGCGGAGCTCTCGTTCAGGG +
Preference number: 4 (lower is better)
Translates to: PIGPPACNEGPRHTREAPWRPRS*RSSRSG
Trigger: CCCTGAACGAGAGCTCCGCCAAGAACGGGGCCGCCA...GGGGGCCTCACGGGTGTGACGAGGCCCTTCATTGCAGGCAGGTGGGCCAATGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp CTTGGGTCTCTGGGCGGTGGCGCAGGCTGCAGCCAGGCGAGGCCCTCAGTGGATGGGATGGTGATGGTGTaGCGCACGCGGAAGTGCACG +
Preference number: 4 (lower is better)
Translates to: LGSLGGGAGCSQARPSVDGMVMV*RTRKCT
Trigger: CGTGCACTTCCGCGTGCGCCACACCATCACCATCCC...ATCCACTGAGGGCCTCGCCTGGCTGCAGCCTGCGCCACCGCCCAGAGACCCAAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR CCA 90 bp GGGATGGGCCGGACCTTGCCTTTCCCCGGGCACAGCCCGAAGGTCCTGCCTCCTAGGCGAGGCCCTCAGTaGATCTCGGCCTCCGTGAAC +
Preference number: 4 (lower is better)
Translates to: GMGRTLPFPGHSPKVLPPRRGPQ*ISASVN
Trigger: GTTCACGGAGGCCGAGATCCACTGAGGGCCTCGCCT...AGGAGGCAGGACCTTCGGGCTGTGCCCGGGGAAAGGCAAGGTCCGGCCCATCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000346387.8
ENST00000354437.8
ENST00000357733.7
ENST00000378280.5
ENST00000378285.5
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp GTAGTCGTGGCCCTGCTTCAGGTCCTGCAGGCCCCGCCAGATGGTCATGCGGTATGGGTCTCTGGGCGGTaGCGCAGGCTGCAGCCAGGC +
Preference number: 4 (lower is better)
Translates to: VVVALLQVLQAPPDGHAVWVSGR*RRLQPG
Trigger: GCCTGGCTGCAGCCTGCGCCACCGCCCAGAGACCCA...TACCGCATGACCATCTGGCGGGGCCTGCAGGACCTGAAGCAGGGCCACGACTAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR CCA 90 bp GGCAGGAAGGAGGCGGTCCTGCAGAATACAGCGTGCTGGGGGCAGAGGCCAGTCGGCAGCTTGGGTCTCTaGGCGGTGGCGCAGGCTGCA +
Preference number: 4 (lower is better)
Translates to: GRKEAVLQNTACWGQRPVGSLGL*AVAQAA
Trigger: TGCAGCCTGCGCCACCGCCCAGAGACCCAAGCTGCC...GACTGGCCTCTGCCCCCAGCACGCTGTATTCTGCAGGACCGCCTCCTTCCTGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp GTGTCAGGATGGGCCCCCGCGGCTCCTGAAGTGGAACATGGGGGAAGAGTGGGGGGCAGCTTGGGTCTCTaGGCGGTGGCGCAGGCTGCA +
Preference number: 4 (lower is better)
Translates to: VSGWAPAAPEVEHGGRVGGSLGL*AVAQAA
Trigger: TGCAGCCTGCGCCACCGCCCAGAGACCCAAGCTGCC...CCCCACTCTTCCCCCATGTTCCACTTCAGGAGCCGCGGGGGCCCATCCTGACAC
68% GC, longest homopolymer 6 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp CTCCCCACCCGGCCTTCCTGGGAACAAGTCCCGCCCACCTGGCTTCTCACTCAGGGCGGCTTCGGTGGCTaGGCCTTTCCTGGGGCCTGT +
Preference number: 4 (lower is better)
Translates to: LPTRPSWEQVPPTWLLTQGGFGG*AFPGAC
Trigger: ACAGGCCCCAGGAAAGGCCCAGCCACCGAAGCCGCC...CTGAGTGAGAAGCCAGGTGGGCGGGACTTGTTCCCAGGAAGGCCGGGTGGGGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp CGGTGCTGTAGTCGTGGCCCTGCTTCAGGTCCTGCAGGCCCCGCCAGATGGTCAGGCGGCTTCGGTGGCTaGGCCTTTCCTGGGGCCTGT +
Preference number: 4 (lower is better)
Translates to: RCCSRGPASGPAGPARWSGGFGG*AFPGAC
Trigger: ACAGGCCCCAGGAAAGGCCCAGCCACCGAAGCCGCC...TGACCATCTGGCGGGGCCTGCAGGACCTGAAGCAGGGCCACGACTACAGCACCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR CCA 90 bp GCGGTTGGGGATGGTGATGGTGTGGCGCACGCGGAAGTGCACGGCCTCCATGACGGCGGCTTCGGTGGCTaGGCCTTTCCTGGGGCCTGT +
Preference number: 4 (lower is better)
Translates to: AVGDGDGVAHAEVHGLHDGGFGG*AFPGAC
Trigger: ACAGGCCCCAGGAAAGGCCCAGCCACCGAAGCCGCC...GTCATGGAGGCCGTGCACTTCCGCGTGCGCCACACCATCACCATCCCCAACCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR CCA 90 bp CTCCCCACCCGGCCTTCCTGGGAACAAGTCCCGCCCACCTGGCTTCTCACTCAGCACAGGCGGCTTCGGTaGCTGGGCCTTTCCTGGGGC +
Preference number: 4 (lower is better)
Translates to: LPTRPSWEQVPPTWLLTQHRRLR*LGLSWG
Trigger: GCCCCAGGAAAGGCCCAGCCACCGAAGCCGCCTGTG...CTGAGTGAGAAGCCAGGTGGGCGGGACTTGTTCCCAGGAAGGCCGGGTGGGGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp GGCAGGAAGGAGGCGGTCCTGCAGAATACAGCGTGCTGGGGGCAGAGGCCAGTCCCCACCCGGCCTTCCTaGGAACAAGTCCCGCCCACC +
Preference number: 4 (lower is better)
Translates to: GRKEAVLQNTACWGQRPVPTRPS*EQVPPT
Trigger: GGTGGGCGGGACTTGTTCCCAGGAAGGCCGGGTGGG...GACTGGCCTCTGCCCCCAGCACGCTGTATTCTGCAGGACCGCCTCCTTCCTGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp TGCGCTGGGCTGAGGAACCCCGGGTGTCAGGATGGGCCCCCGCGGCTCCTGAAGGGCCTACTAACTCCCTaGGGTGCTCCACGAAGGCCT +
Preference number: 4 (lower is better)
Translates to: CAGLRNPGCQDGPPRLLKGLLTP*GAPRRP
Trigger: AGGCCTTCGTGGAGCACCCCAGGGAGTTAGTAGGCC...CTTCAGGAGCCGCGGGGGCCCATCCTGACACCCGGGGTTCCTCAGCCCAGCGCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp CTGGAAGTCGGAGCCGACGCTGCGGTCCCCACCCACGCCTGCCATGGAGCACGCGGCCTACTAACTCCCTaGGGTGCTCCACGAAGGCCT +
Preference number: 4 (lower is better)
Translates to: LEVGADAAVPTHACHGARGLLTP*GAPRRP
Trigger: AGGCCTTCGTGGAGCACCCCAGGGAGTTAGTAGGCC...GCGTGCTCCATGGCAGGCGTGGGTGGGGACCGCAGCGTCGGCTCCGACTTCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp GCCTTGCAGTCGGGCAGGTCGAAGCCGAAGTCCGCCCACTCGTCAGGGCCGCCGTCAGGCTGCTCCTCGTaGATGGAGGTGGCCCCAGAA +
Preference number: 4 (lower is better)
Translates to: ALQSGRSKPKSAHSSGPPSGCSS*MEVAPE
Trigger: TTCTGGGGCCACCTCCATCCACGAGGAGCAGCCTGA...CGGCGGCCCTGACGAGTGGGCGGACTTCGGCTTCGACCTGCCCGACTGCAAGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000604074.5
CDS-3UTR CCA 90 bp GGCCACCAAGGCTCAGGCTGCTCCTCGTGGATGGAGGTGGCCCCAGAAAGGGCCCCTAGGCAGGGGGTGTaGAGCTGGCCGTGCCAGAAG +
Preference number: 4 (lower is better)
Translates to: GHQGSGCSSWMEVAPERAPRQGV*SWPCQK
Trigger: CTTCTGGCACGGCCAGCTCCACACCCCCTGCCTAGG...GGCCCTTTCTGGGGCCACCTCCATCCACGAGGAGCAGCCTGAGCCTTGGTGGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp CCCATTGGCCCACCTGCCTGCAATGAAGGGCCTCGTCACACCCGTGAGGCCCCCGAGGTGACATGCAGCTaGGGTGGCTGCGCCACCCTG +
Preference number: 4 (lower is better)
Translates to: PIGPPACNEGPRHTREAPEVTCS*GGCATL
Trigger: CAGGGTGGCGCAGCCACCCCAGCTGCATGTCACCTC...GGGGGCCTCACGGGTGTGACGAGGCCCTTCATTGCAGGCAGGTGGGCCAATGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp CAGCTGGGGCCATCTGGCTGCTCCGTGTTCTGGCCGGCTTCCTTGGACATCTGGCCCCGGGTGTCAGGATaGGCCCCCGCGGCTCCTGAA +
Preference number: 4 (lower is better)
Translates to: QLGPSGCSVFWPASLDIWPRVSG*APAAPE
Trigger: TTCAGGAGCCGCGGGGGCCCATCCTGACACCCGGGG...CCAGATGTCCAAGGAAGCCGGCCAGAACACGGAGCAGCCAGATGGCCCCAGCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp CAAGCGTGCACCCAGGCGACTGTGCTGTCAGCGGCCCCCGGGGAGGTGGACGGTGGCTGCTCCGTGTTCTaGCCGGCTTCCTTGGACATC +
Preference number: 4 (lower is better)
Translates to: QACTQATVLSAAPGEVDGGCSVF*PASLDI
Trigger: GATGTCCAAGGAAGCCGGCCAGAACACGGAGCAGCC...ACCGTCCACCTCCCCGGGGGCCGCTGACAGCACAGTCGCCTGGGTGCACGCTTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp GGCTGCTTGCGGGCCTTGCAGTCGGGCAGGTCGAAGCCGAAGTCCGCCCACTCGCTAGACAGGTGCAGCTaGGGCCATCTGGCTGCTCCG +
Preference number: 4 (lower is better)
Translates to: GCLRALQSGRSKPKSAHSLDRCS*GHLAAP
Trigger: CGGAGCAGCCAGATGGCCCCAGCTGCACCTGTCTAG...CGAGTGGGCGGACTTCGGCTTCGACCTGCCCGACTGCAAGGCCCGCAAGCAGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604074.5
CDS-3UTR CCA 90 bp GCAGAGAGAGTCCCCAGCCCCCGGCGCGGGCAAGACGCAGTTAGGGACATTCCCTGCGGGTCGGGCTCCTaGGTACAGCAAGGGCTTCCC +
Preference number: 4 (lower is better)
Translates to: AERVPSPRRGQDAVRDIPCGSGS*VQQGLP
Trigger: GGGAAGCCCTTGCTGTACCCAGGAGCCCGACCCGCA...GGGAATGTCCCTAACTGCGTCTTGCCCGCGCCGGGGGCTGGGGACTCTCTCTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp GCTCCGGTTCCCTGCCCTGAAGCTGTGCTCCGGGACGGTCAAGGTTCGGCCACCTGCGGGTCGGGCTCCTaGGTACAGCAAGGGCTTCCC +
Preference number: 4 (lower is better)
Translates to: APVPCPEAVLRDGQGSATCGSGS*VQQGLP
Trigger: GGGAAGCCCTTGCTGTACCCAGGAGCCCGACCCGCA...GGTGGCCGAACCTTGACCGTCCCGGAGCACAGCTTCAGGGCAGGGAACCGGAGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp CCTGCACTCTGGGTGGTGTCTCGGCTTGCGTGGGTGAGGGCTCCCATTGGCCCACTGTGCGGGGGAGGCTaGCCCACCAGCTGGTTGACG +
Preference number: 4 (lower is better)
Translates to: PALWVVSRLAWVRAPIGPLCGGG*PTSWLT
Trigger: CGTCAACCAGCTGGTGGGCCAGCCTCCCCCGCACAG...TGGGCCAATGGGAGCCCTCACCCACGCAAGCCGAGACACCACCCAGAGTGCAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378288.8
ENST00000378295.9
CDS-3UTR CCA 90 bp GCTGCGCGGTGCTGTAGTCGTGGCCCTGCTTCAGGTCCTGCAGGCCCCGCCAGAGGCACTGCGTGGCCATaGTTGTTGAGCATCCCGGGG +
Preference number: 4 (lower is better)
Translates to: AARCCSRGPASGPAGPARGTAWP*LLSIPG
Trigger: CCCCGGGATGCTCAACAACCATGGCCACGCAGTGCC...TCTGGCGGGGCCTGCAGGACCTGAAGCAGGGCCACGACTACAGCACCGCGCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
CDS-3UTR CCA 90 bp GGGATGGGCCGGACCTTGCCTTTCCCCGGGCACAGCCCGAAGGTCCTGCCTCCTGGCACTGCGTGGCCATaGTTGTTGAGCATCCCGGGG +
Preference number: 4 (lower is better)
Translates to: GMGRTLPFPGHSPKVLPPGTAWP*LLSIPG
Trigger: CCCCGGGATGCTCAACAACCATGGCCACGCAGTGCC...AGGAGGCAGGACCTTCGGGCTGTGCCCGGGGAAAGGCAAGGTCCGGCCCATCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354437.8
ENST00000357733.7
ENST00000378280.5
ENST00000378285.5
ENST00000378288.8
ENST00000378295.9
CDS-3UTR CCA 90 bp CTTGGGTCTCTGGGCGGTGGCGCAGGCTGCAGCCAGGCGAGGCCCTCAGTGGATGGCACTGCGTGGCCATaGTTGTTGAGCATCCCGGGG +
Preference number: 4 (lower is better)
Translates to: LGSLGGGAGCSQARPSVDGTAWP*LLSIPG
Trigger: CCCCGGGATGCTCAACAACCATGGCCACGCAGTGCC...ATCCACTGAGGGCCTCGCCTGGCTGCAGCCTGCGCCACCGCCCAGAGACCCAAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
CDS-3UTR CCA 90 bp TGCGCTGGGCTGAGGAACCCCGGGTGTCAGGATGGGCCCCCGCGGCTCCTGAAGTGCTCATCTCGCCGTTaGCTGGCACTGCGTGGCCAT +
Preference number: 4 (lower is better)
Translates to: CAGLRNPGCQDGPPRLLKCSSRR*LALRGH
Trigger: ATGGCCACGCAGTGCCAGCCAACGGCGAGATGAGCA...CTTCAGGAGCCGCGGGGGCCCATCCTGACACCCGGGGTTCCTCAGCCCAGCGCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
CDS-3UTR CCA 90 bp TCGGGTAGCAGGTGCCCAGCCCCCAAGAGATGGGTGTGGTGCCTGGGGCATGGGCCCGAGACCATGGACTaGGCGCTGTGGCTGCTGCTC +
Preference number: 4 (lower is better)
Translates to: SGSRCPAPKRWVWCLGHGPETMD*ALWLLL
Trigger: GAGCAGCAGCCACAGCGCCCAGTCCATGGTCTCGGG...CCCATGCCCCAGGCACCACACCCATCTCTTGGGGGCTGGGCACCTGCTACCCGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
CDS-3UTR CCA 90 bp GTGCTCCGGGACGGTCAAGGTTCGGCCACCAAGGCTCAGGCTGCTCCTCGTGGAGGGACCCCGAGACCATaGACTGGGCGCTGTGGCTGC +
Preference number: 4 (lower is better)
Translates to: VLRDGQGSATKAQAAPRGGTPRP*TGRCGC
Trigger: GCAGCCACAGCGCCCAGTCCATGGTCTCGGGGTCCC...TCCACGAGGAGCAGCCTGAGCCTTGGTGGCCGAACCTTGACCGTCCCGGAGCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
CDS-3UTR CCA 90 bp CTGCTTGCGGGCCTTGCAGTCGGGCAGGTCGAAGCCGAAGTCCGCCCACTCGTCGGTGGCGGAGTGCAGTaGGACCCCGAGACCATGGAC +
Preference number: 4 (lower is better)
Translates to: LLAGLAVGQVEAEVRPLVGGGVQ*DPETMD
Trigger: GTCCATGGTCTCGGGGTCCCACTGCACTCCGCCACC...GACGAGTGGGCGGACTTCGGCTTCGACCTGCCCGACTGCAAGGCCCGCAAGCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
CDS-3UTR CCA 90 bp CAGCTGGGGCCATCTGGCTGCTCCGTGTTCTGGCCGGCTTCCTTGGACATCTGGCCGTGGGACGAGGCATaGATCTGGGCGGCCCGAGGG +
Preference number: 4 (lower is better)
Translates to: QLGPSGCSVFWPASLDIWPWDEA*IWAARG
Trigger: CCCTCGGGCCGCCCAGATCCATGCCTCGTCCCACGG...CCAGATGTCCAAGGAAGCCGGCCAGAACACGGAGCAGCCAGATGGCCCCAGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378288.8
CDS-3UTR CCA 90 bp GATGGGCTGCTTGCGGGCCTTGCAGTCGGGCAGGTCGAAGCCGAAGTCCGCCCACACACGCCAGGGAACTaGTGTCCCGTGGGACGAGGC +
Preference number: 4 (lower is better)
Translates to: DGLLAGLAVGQVEAEVRPHTPGN*CPVGRG
Trigger: GCCTCGTCCCACGGGACACCAGTTCCCTGGCGTGTG...TGGGCGGACTTCGGCTTCGACCTGCCCGACTGCAAGGCCCGCAAGCAGCCCATC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378280.5
ENST00000378285.5
CDS-3UTR CCA 90 bp CGCGGTGCTGTAGTCGTGGCCCTGCTTCAGGTCCTGCAGGCCCCGCCAGATGGTCACACGCCAGGGAACTaGTGTCCCGTGGGACGAGGC +
Preference number: 4 (lower is better)
Translates to: RGAVVVALLQVLQAPPDGHTPGN*CPVGRG
Trigger: GCCTCGTCCCACGGGACACCAGTTCCCTGGCGTGTG...ACCATCTGGCGGGGCCTGCAGGACCTGAAGCAGGGCCACGACTACAGCACCGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378280.5
ENST00000378285.5
CDS-3UTR TCA 90 bp GCGGTGGCGCAGGCTGCAGCCAGGCGAGGCCCTCAGTGGATCTCGGCCTCCGTGTGGACTGCTGGAAAGTaGCCTCAAAGTGGTGGGGTC +
Preference number: 4 (lower is better)
Translates to: AVAQAAARRGPQWISASVWTAGK*PQSGGV
Trigger: GACCCCACCACTTTGAGGTCACTTTCCAGCAGTCCA...CACGGAGGCCGAGATCCACTGAGGGCCTCGCCTGGCTGCAGCCTGCGCCACCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR TCA 90 bp TGGGCGGTGGCGCAGGCTGCAGCCAGGCGAGGCCCTCAGTGGATCTCGGCCTCCTGGACTGCTGGAAAGTaGCCTCAAAGTGGTGGGGTC +
Preference number: 4 (lower is better)
Translates to: WAVAQAAARRGPQWISASWTAGK*PQSGGV
Trigger: GACCCCACCACTTTGAGGTCACTTTCCAGCAGTCCA...GGAGGCCGAGATCCACTGAGGGCCTCGCCTGGCTGCAGCCTGCGCCACCGCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR TCA 90 bp GCTGCTGCGCGGTGCTGTAGTCGTGGCCCTGCTTCAGGTCCTGCAGGCCCCGCCCAGACTGTCCTTCGTTaGAGTCCCTCCCGAGCTCGT +
Preference number: 4 (lower is better)
Translates to: AAARCCSRGPASGPAGPAQTVLR*SPSRAR
Trigger: ACGAGCTCGGGAGGGACTTCAACGAAGGACAGTCTG...GGCGGGGCCTGCAGGACCTGAAGCAGGGCCACGACTACAGCACCGCGCAGCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR TCA 90 bp CTGGAAGTCGGAGCCGACGCTGCGGTCCCCACCCACGCCTGCCATGGAGCACGCCAGACTGTCCTTCGTTaGAGTCCCTCCCGAGCTCGT +
Preference number: 4 (lower is better)
Translates to: LEVGADAAVPTHACHGARQTVLR*SPSRAR
Trigger: ACGAGCTCGGGAGGGACTTCAACGAAGGACAGTCTG...GCGTGCTCCATGGCAGGCGTGGGTGGGGACCGCAGCGTCGGCTCCGACTTCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR TCA 90 bp CTCCCCACCCGGCCTTCCTGGGAACAAGTCCCGCCCACCTGGCTTCTCACTCAGTGCCTTCCACGCGGATaGGGTGGCTGGCTGGAGCAG +
Preference number: 4 (lower is better)
Translates to: LPTRPSWEQVPPTWLLTQCLPRG*GGWLEQ
Trigger: CTGCTCCAGCCAGCCACCTCATCCGCGTGGAAGGCA...CTGAGTGAGAAGCCAGGTGGGCGGGACTTGTTCCCAGGAAGGCCGGGTGGGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR TCA 90 bp GCGGTTGGGGATGGTGATGGTGTGGCGCACGCGGAAGTGCACGGCCTCCATGACTGCCTTCCACGCGGATaGGGTGGCTGGCTGGAGCAG +
Preference number: 4 (lower is better)
Translates to: AVGDGDGVAHAEVHGLHDCLPRG*GGWLEQ
Trigger: CTGCTCCAGCCAGCCACCTCATCCGCGTGGAAGGCA...GTCATGGAGGCCGTGCACTTCCGCGTGCGCCACACCATCACCATCCCCAACCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR TCA 90 bp GCGGTTGGGGATGGTGATGGTGTGGCGCACGCGGAAGTGCACGGCCTCCATGACAGTGCACGGCCTCCATaGCCCGCTGGCGCTGCAGTT +
Preference number: 4 (lower is better)
Translates to: AVGDGDGVAHAEVHGLHDSARPP*PAGAAV
Trigger: AACTGCAGCGCCAGCGGGTCATGGAGGCCGTGCACT...GTCATGGAGGCCGTGCACTTCCGCGTGCGCCACACCATCACCATCCCCAACCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR TCA 90 bp GGTGCTGTAGTCGTGGCCCTGCTTCAGGTCCTGCAGGCCCCGCCAGATGGTCATCGCGGTTGGGGATGGTaGTGGTGTGGCGCACGCGGA +
Preference number: 4 (lower is better)
Translates to: GAVVVALLQVLQAPPDGHRGWGW*WCGARG
Trigger: TCCGCGTGCGCCACACCATCACCATCCCCAACCGCG...ATGACCATCTGGCGGGGCCTGCAGGACCTGAAGCAGGGCCACGACTACAGCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR TCA 90 bp AGCCAGGCGAGGCCCTCAGTGGATCTCGGCCTCCGTGAACTCCTCCTTGATGGGCGCGGTTGGGGATGGTaGTGGTGTGGCGCACGCGGA +
Preference number: 4 (lower is better)
Translates to: SQARPSVDLGLRELLLDGRGWGW*WCGARG
Trigger: TCCGCGTGCGCCACACCATCACCATCCCCAACCGCG...CCCATCAAGGAGGAGTTCACGGAGGCCGAGATCCACTGAGGGCCTCGCCTGGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR TCA 90 bp TCCTTGATGGGCTGCTTGCGGGCCTTGCAGTCGGGCAGGTCGAAGCCGAAGTCCCGCGGTTGGGGATGGTaGTGGTGTGGCGCACGCGGA +
Preference number: 4 (lower is better)
Translates to: SLMGCLRALQSGRSKPKSRGWGW*WCGARG
Trigger: TCCGCGTGCGCCACACCATCACCATCCCCAACCGCG...GGACTTCGGCTTCGACCTGCCCGACTGCAAGGCCCGCAAGCAGCCCATCAAGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR TCA 90 bp AGGGCCGCCGCCTGGGCCGCCGCGGTTGGGGATGGTGATGGTGTGGCGCACGCGTCATGGGCGCTAGGTTaGACTCCAAAGAGAATGCTG +
Preference number: 4 (lower is better)
Translates to: RAAAWAAAVGDGDGVAHASWALG*TPKRML
Trigger: CAGCATTCTCTTTGGAGTTCAACCTAGCGCCCATGA...CGCGTGCGCCACACCATCACCATCCCCAACCGCGGCGGCCCAGGCGGCGGCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000604074.5
CDS-3UTR TCA 90 bp TGCGCTGGGCTGAGGAACCCCGGGTGTCAGGATGGGCCCCCGCGGCTCCTGAAGAGCAAGATGGAGTCCTaGTCTGGGGATGGGGGCTGT +
Preference number: 4 (lower is better)
Translates to: CAGLRNPGCQDGPPRLLKSKMES*SGDGGC
Trigger: ACAGCCCCCATCCCCAGATCAGGACTCCATCTTGCT...CTTCAGGAGCCGCGGGGGCCCATCCTGACACCCGGGGTTCCTCAGCCCAGCGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR TCA 90 bp CAAGCGTGCACCCAGGCGACTGTGCTGTCAGCGGCCCCCGGGGAGGTGGACGGTAGCAAGATGGAGTCCTaGTCTGGGGATGGGGGCTGT +
Preference number: 4 (lower is better)
Translates to: QACTQATVLSAAPGEVDGSKMES*SGDGGC
Trigger: ACAGCCCCCATCCCCAGATCAGGACTCCATCTTGCT...ACCGTCCACCTCCCCGGGGGCCGCTGACAGCACAGTCGCCTGGGTGCACGCTTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR TCA 90 bp GCCGCCGATGGAGATGGTGGCCGCGTTGCTAGAGCGGAGCAGCTGCTGCGCGGTTGCTGCTCAGCAGATTaGACTGGGCCGTGGCGAGGT +
Preference number: 4 (lower is better)
Translates to: AADGDGGRVARAEQLLRGCCSAD*TGPWRG
Trigger: ACCTCGCCACGGCCCAGTTCAATCTGCTGAGCAGCA...ACCGCGCAGCAGCTGCTCCGCTCTAGCAACGCGGCCACCATCTCCATCGGCGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378280.5
ENST00000378285.5
CDS-3UTR GCA 90 bp GTGGCGCACGCGGAAGTGCACGGCCTCCATGACCCGCTGGCGCTGCAGTTCCCCAGAGAGCTCCAGAGGTaGTCAAACGTGGTGCCCCCA +
Preference number: 4 (lower is better)
Translates to: VAHAEVHGLHDPLALQFPRELQR*SNVVPP
Trigger: TGGGGGCACCACGTTTGAGCACCTCTGGAGCTCTCT...GGGGAACTGCAGCGCCAGCGGGTCATGGAGGCCGTGCACTTCCGCGTGCGCCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354437.8
ENST00000604074.5
CDS-3UTR GCA 90 bp GTAGTCGTGGCCCTGCTTCAGGTCCTGCAGGCCCCGCCAGATGGTCATGCGGTACCGAGGCCGCGCGGCTaGTCATCTGGTCCATGGTGC +
Preference number: 4 (lower is better)
Translates to: VVVALLQVLQAPPDGHAVPRPRG*SSGPWC
Trigger: GCACCATGGACCAGATGAGCAGCCGCGCGGCCTCGG...TACCGCATGACCATCTGGCGGGGCCTGCAGGACCTGAAGCAGGGCCACGACTAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR GCA 90 bp GTGCTCCGGGACGGTCAAGGTTCGGCCACCAAGGCTCAGGCTGCTCCTCGTGGAGGCACCACGACGCTCTaGCTGCCGGTGACAGGGTCA +
Preference number: 4 (lower is better)
Translates to: VLRDGQGSATKAQAAPRGGTTTL*LPVTGS
Trigger: TGACCCTGTCACCGGCAGGCAGAGCGTCGTGGTGCC...TCCACGAGGAGCAGCCTGAGCCTTGGTGGCCGAACCTTGACCGTCCCGGAGCAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp GCTGTAGTCGTGGCCCTGCTTCAGGTCCTGCAGGCCCCGCCAGATGGTCATGCGGGCACCACGACGCTCTaGCTGCCGGTGACAGGGTCA +
Preference number: 4 (lower is better)
Translates to: AVVVALLQVLQAPPDGHAGTTTL*LPVTGS
Trigger: TGACCCTGTCACCGGCAGGCAGAGCGTCGTGGTGCC...CGCATGACCATCTGGCGGGGCCTGCAGGACCTGAAGCAGGGCCACGACTACAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR GCA 90 bp GGGCAGGAAGGAGGCGGTCCTGCAGAATACAGCGTGCTGGGGGCAGAGGCCAGTGGCACCACGACGCTCTaGCTGCCGGTGACAGGGTCA +
Preference number: 4 (lower is better)
Translates to: GQEGGGPAEYSVLGAEASGTTTL*LPVTGS
Trigger: TGACCCTGTCACCGGCAGGCAGAGCGTCGTGGTGCC...ACTGGCCTCTGCCCCCAGCACGCTGTATTCTGCAGGACCGCCTCCTTCCTGCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp GATGGGCTGCTTGCGGGCCTTGCAGTCGGGCAGGTCGAAGCCGAAGTCCGCCCATGGGCCGCCGGTTCATaGCCCCTACACAGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: DGLLAGLAVGQVEAEVRPWAAGS*PLHSCC
Trigger: ACAGCAGCTGTGTAGGGGGCATGAACCGGCGGCCCA...TGGGCGGACTTCGGCTTCGACCTGCCCGACTGCAAGGCCCGCAAGCAGCCCATC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR GCA 90 bp CCCTGCTTCAGGTCCTGCAGGCCCCGCCAGATGGTCATGCGGTACTGCTCGGGGTGGGCCGCCGGTTCATaGCCCCTACACAGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: PCFRSCRPRQMVMRYCSGWAAGS*PLHSCC
Trigger: ACAGCAGCTGTGTAGGGGGCATGAACCGGCGGCCCA...CCCCGAGCAGTACCGCATGACCATCTGGCGGGGCCTGCAGGACCTGAAGCAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR GCA 90 bp GGCAGGAAGGAGGCGGTCCTGCAGAATACAGCGTGCTGGGGGCAGAGGCCAGTCCAGGACAGGCGCAGATaGGGCCCTCAAAGGACCGGC +
Preference number: 4 (lower is better)
Translates to: GRKEAVLQNTACWGQRPVQDRRR*GPQRTG
Trigger: GCCGGTCCTTTGAGGGCCGCATCTGCGCCTGTCCTG...GACTGGCCTCTGCCCCCAGCACGCTGTATTCTGCAGGACCGCCTCCTTCCTGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp GGGATGGGCCGGACCTTGCCTTTCCCCGGGCACAGCCCGAAGGTCCTGCCTCCTGAGTCCACCAGTGGCTaGGGCACCAACTCCATCAGC +
Preference number: 4 (lower is better)
Translates to: GMGRTLPFPGHSPKVLPPESTSG*GTNSIS
Trigger: GCTGATGGAGTTGGTGCCGCAGCCACTGGTGGACTC...AGGAGGCAGGACCTTCGGGCTGTGCCCGGGGAAAGGCAAGGTCCGGCCCATCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000346387.8
ENST00000354437.8
ENST00000357733.7
ENST00000378280.5
ENST00000378285.5
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp CAGCTGCTGCGCGGTGCTGTAGTCGTGGCCCTGCTTCAGGTCCTGCAGGCCCCGGAGTCCACCAGTGGCTaGGGCACCAACTCCATCAGC +
Preference number: 4 (lower is better)
Translates to: QLLRGAVVVALLQVLQAPESTSG*GTNSIS
Trigger: GCTGATGGAGTTGGTGCCGCAGCCACTGGTGGACTC...CGGGGCCTGCAGGACCTGAAGCAGGGCCACGACTACAGCACCGCGCAGCAGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR GCA 90 bp GCCTTGCAGTCGGGCAGGTCGAAGCCGAAGTCCGCCCACTCGTCAGGGCCGCCGATGGTCATGCGGTACTaGTCGGGGATCTTCAGGGCC +
Preference number: 4 (lower is better)
Translates to: ALQSGRSKPKSAHSSGPPMVMRY*SGIFRA
Trigger: GGCCCTGAAGATCCCCGAGCAGTACCGCATGACCAT...CGGCGGCCCTGACGAGTGGGCGGACTTCGGCTTCGACCTGCCCGACTGCAAGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR GCA 90 bp GGGATGGGCCGGACCTTGCCTTTCCCCGGGCACAGCCCGAAGGTCCTGCCTCCTCCCGCCAGATGGTCATaGGGTACTGCTCGGGGATCT +
Preference number: 4 (lower is better)
Translates to: GMGRTLPFPGHSPKVLPPPARWS*GTARGS
Trigger: AGATCCCCGAGCAGTACCGCATGACCATCTGGCGGG...AGGAGGCAGGACCTTCGGGCTGTGCCCGGGGAAAGGCAAGGTCCGGCCCATCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000346387.8
ENST00000354437.8
ENST00000357733.7
ENST00000378280.5
ENST00000378285.5
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp CTCCCCACCCGGCCTTCCTGGGAACAAGTCCCGCCCACCTGGCTTCTCACTCAGCCCTGCTTCAGGTCCTaGAGGCCCCGCCAGATGGTC +
Preference number: 4 (lower is better)
Translates to: LPTRPSWEQVPPTWLLTQPCFRS*RPRQMV
Trigger: GACCATCTGGCGGGGCCTGCAGGACCTGAAGCAGGG...CTGAGTGAGAAGCCAGGTGGGCGGGACTTGTTCCCAGGAAGGCCGGGTGGGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp AGTTCCCCTGAGCCGCCGATGGAGATGGTGGCCGCGTTGCTAGAGCGGAGCAGCCCCTGCTTCAGGTCCTaGAGGCCCCGCCAGATGGTC +
Preference number: 4 (lower is better)
Translates to: SSPEPPMEMVAALLERSSPCFRS*RPRQMV
Trigger: GACCATCTGGCGGGGCCTGCAGGACCTGAAGCAGGG...GCTGCTCCGCTCTAGCAACGCGGCCACCATCTCCATCGGCGGCTCAGGGGAACT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR GCA 90 bp GTGCTCCGGGACGGTCAAGGTTCGGCCACCAAGGCTCAGGCTGCTCCTCGTGGAGCAGCTGCTGCGCGGTaGTGTAGTCGTGGCCCTGCT +
Preference number: 4 (lower is better)
Translates to: VLRDGQGSATKAQAAPRGAAAAR*CSRGPA
Trigger: AGCAGGGCCACGACTACAGCACCGCGCAGCAGCTGC...TCCACGAGGAGCAGCCTGAGCCTTGGTGGCCGAACCTTGACCGTCCCGGAGCAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp CTTCAGGAGGTGGCCTCGGGTAGCAGGTGCCCAGCCCCCAAGAGATGGGTGTGGGCTGCTTGCGGGCCTTaGAGTCGGGCAGGTCGAAGC +
Preference number: 4 (lower is better)
Translates to: LQEVASGSRCPAPKRWVWAACGP*SRAGRS
Trigger: GCTTCGACCTGCCCGACTGCAAGGCCCGCAAGCAGC...CCACACCCATCTCTTGGGGGCTGGGCACCTGCTACCCGAGGCCACCTCCTGAAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp GCTGTAGTCGTGGCCCTGCTTCAGGTCCTGCAGGCCCCGCCAGATGGTCATGCGGCTGCTTGCGGGCCTTaGAGTCGGGCAGGTCGAAGC +
Preference number: 4 (lower is better)
Translates to: AVVVALLQVLQAPPDGHAAACGP*SRAGRS
Trigger: GCTTCGACCTGCCCGACTGCAAGGCCCGCAAGCAGC...CGCATGACCATCTGGCGGGGCCTGCAGGACCTGAAGCAGGGCCACGACTACAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR GCA 90 bp TGCGCTGGGCTGAGGAACCCCGGGTGTCAGGATGGGCCCCCGCGGCTCCTGAAGACAGCCCGAAGGTCCTaGCTCCTGAGGCAGTTTTGG +
Preference number: 4 (lower is better)
Translates to: CAGLRNPGCQDGPPRLLKTARRS*LLRQFW
Trigger: CCAAAACTGCCTCAGGAGGCAGGACCTTCGGGCTGT...CTTCAGGAGCCGCGGGGGCCCATCCTGACACCCGGGGTTCCTCAGCCCAGCGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp CAAGCGTGCACCCAGGCGACTGTGCTGTCAGCGGCCCCCGGGGAGGTGGACGGTACAGCCCGAAGGTCCTaGCTCCTGAGGCAGTTTTGG +
Preference number: 4 (lower is better)
Translates to: QACTQATVLSAAPGEVDGTARRS*LLRQFW
Trigger: CCAAAACTGCCTCAGGAGGCAGGACCTTCGGGCTGT...ACCGTCCACCTCCCCGGGGGCCGCTGACAGCACAGTCGCCTGGGTGCACGCTTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp GTAGTCGTGGCCCTGCTTCAGGTCCTGCAGGCCCCGCCAGATGGTCATGCGGTAGGATGGGCCGGACCTTaGCTTTCCCCGGGCACAGCC +
Preference number: 4 (lower is better)
Translates to: VVVALLQVLQAPPDGHAVGWAGP*LSPGTA
Trigger: GGCTGTGCCCGGGGAAAGGCAAGGTCCGGCCCATCC...TACCGCATGACCATCTGGCGGGGCCTGCAGGACCTGAAGCAGGGCCACGACTAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR GCA 90 bp GGTGCTGTAGTCGTGGCCCTGCTTCAGGTCCTGCAGGCCCCGCCAGATGGTCATGGATGGGCCGGACCTTaGCTTTCCCCGGGCACAGCC +
Preference number: 4 (lower is better)
Translates to: GAVVVALLQVLQAPPDGHGWAGP*LSPGTA
Trigger: GGCTGTGCCCGGGGAAAGGCAAGGTCCGGCCCATCC...ATGACCATCTGGCGGGGCCTGCAGGACCTGAAGCAGGGCCACGACTACAGCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR GCA 90 bp CTGGAAGTCGGAGCCGACGCTGCGGTCCCCACCCACGCCTGCCATGGAGCACGCATTGGCCCACCTGCCTaGAATGAAGGGCCTCGTCAC +
Preference number: 4 (lower is better)
Translates to: LEVGADAAVPTHACHGARIGPPA*NEGPRH
Trigger: GTGACGAGGCCCTTCATTGCAGGCAGGTGGGCCAAT...GCGTGCTCCATGGCAGGCGTGGGTGGGGACCGCAGCGTCGGCTCCGACTTCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp GTGTCAGGATGGGCCCCCGCGGCTCCTGAAGTGGAACATGGGGGAAGAGTGGGGAGGGGCCAGGCAGCCTaGACTCTGGGTGGTGTCTCG +
Preference number: 4 (lower is better)
Translates to: VSGWAPAAPEVEHGGRVGRGQAA*TLGGVS
Trigger: CGAGACACCACCCAGAGTGCAGGCTGCCTGGCCCCT...CCCCACTCTTCCCCCATGTTCCACTTCAGGAGCCGCGGGGGCCCATCCTGACAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp TGCAGTTCCCCTGAGCCGCCGATGGAGATGGTGGCCGCGTTGCTAGAGCGGAGCAGGGGCCAGGCAGCCTaGACTCTGGGTGGTGTCTCG +
Preference number: 4 (lower is better)
Translates to: CSSPEPPMEMVAALLERSRGQAA*TLGGVS
Trigger: CGAGACACCACCCAGAGTGCAGGCTGCCTGGCCCCT...GCTCCGCTCTAGCAACGCGGCCACCATCTCCATCGGCGGCTCAGGGGAACTGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000604074.5
CDS-3UTR GCA 90 bp GTGTCAGGATGGGCCCCCGCGGCTCCTGAAGTGGAACATGGGGGAAGAGTGGGGCTGCCCCCACAAGCGTaGACCCAGGCGACTGTGCTG +
Preference number: 4 (lower is better)
Translates to: VSGWAPAAPEVEHGGRVGLPPQA*TQATVL
Trigger: CAGCACAGTCGCCTGGGTGCACGCTTGTGGGGGCAG...CCCCACTCTTCCCCCATGTTCCACTTCAGGAGCCGCGGGGGCCCATCCTGACAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp CTTCAGGAGGTGGCCTCGGGTAGCAGGTGCCCAGCCCCCAAGAGATGGGTGTGGCTGCCCCCACAAGCGTaGACCCAGGCGACTGTGCTG +
Preference number: 4 (lower is better)
Translates to: LQEVASGSRCPAPKRWVWLPPQA*TQATVL
Trigger: CAGCACAGTCGCCTGGGTGCACGCTTGTGGGGGCAG...CCACACCCATCTCTTGGGGGCTGGGCACCTGCTACCCGAGGCCACCTCCTGAAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp CAGCTGGGGCCATCTGGCTGCTCCGTGTTCTGGCCGGCTTCCTTGGACATCTGGCAGCCCCGTTCCTGCTaGCCCCACAAGCGTGCACCC +
Preference number: 4 (lower is better)
Translates to: QLGPSGCSVFWPASLDIWQPRSC*PHKRAP
Trigger: GGGTGCACGCTTGTGGGGGCAGCAGGAACGGGGCTG...CCAGATGTCCAAGGAAGCCGGCCAGAACACGGAGCAGCCAGATGGCCCCAGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp GTAGTCGTGGCCCTGCTTCAGGTCCTGCAGGCCCCGCCAGATGGTCATGCGGTACAGCCCCGTTCCTGCTaGCCCCACAAGCGTGCACCC +
Preference number: 4 (lower is better)
Translates to: VVVALLQVLQAPPDGHAVQPRSC*PHKRAP
Trigger: GGGTGCACGCTTGTGGGGGCAGCAGGAACGGGGCTG...TACCGCATGACCATCTGGCGGGGCCTGCAGGACCTGAAGCAGGGCCACGACTAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000604074.5
CDS-3UTR GCA 90 bp GTGTCAGGATGGGCCCCCGCGGCTCCTGAAGTGGAACATGGGGGAAGAGTGGGGCGACAGCCCCGTTCCTaGTGCCCCCACAAGCGTGCA +
Preference number: 4 (lower is better)
Translates to: VSGWAPAAPEVEHGGRVGRQPRS*CPHKRA
Trigger: TGCACGCTTGTGGGGGCAGCAGGAACGGGGCTGTCG...CCCCACTCTTCCCCCATGTTCCACTTCAGGAGCCGCGGGGGCCCATCCTGACAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 23 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp CCCATTGGCCCACCTGCCTGCAATGAAGGGCCTCGTCACACCCGTGAGGCCCCCGGCTCCCTAGACAGGTaGAGCTGGGGCCATCTGGCT +
Preference number: 4 (lower is better)
Translates to: PIGPPACNEGPRHTREAPGSLDR*SWGHLA
Trigger: AGCCAGATGGCCCCAGCTGCACCTGTCTAGGGAGCC...GGGGGCCTCACGGGTGTGACGAGGCCCTTCATTGCAGGCAGGTGGGCCAATGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp GCAGAGAGAGTCCCCAGCCCCCGGCGCGGGCAAGACGCAGTTAGGGACATTCCCCAGGTTGGGTGTAGCTaGCGAACTGTGCGGGGGAGG +
Preference number: 4 (lower is better)
Translates to: AERVPSPRRGQDAVRDIPQVGCS*RTVRGR
Trigger: CCTCCCCCGCACAGTTCGGCAGCTACACCCAACCTG...GGGAATGTCCCTAACTGCGTCTTGCCCGCGCCGGGGGCTGGGGACTCTCTCTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000378288.8
ENST00000378295.9
CDS-3UTR GCA 90 bp GGACCTTGCCTTTCCCCGGGCACAGCCCGAAGGTCCTGCCTCCTGAGGCAGTTTGGCAGGAGCCGAGGATaGTGGGGAACATGCGGGCCG +
Preference number: 4 (lower is better)
Translates to: GPCLSPGTARRSCLLRQFGRSRG*WGTCGP
Trigger: CGGCCCGCATGTTCCCCAGCATCCTCGGCTCCTGCC...AAACTGCCTCAGGAGGCAGGACCTTCGGGCTGTGCCCGGGGAAAGGCAAGGTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378280.5
ENST00000378285.5
ENST00000378288.8
CDS-3UTR GCA 90 bp AGCCAGGCGAGGCCCTCAGTGGATCTCGGCCTCCGTGAACTCCTCCTTGATGGGCGTGGCGAGGTGCCGTaGGGGGTCACCGACGTACAG +
Preference number: 4 (lower is better)
Translates to: SQARPSVDLGLRELLLDGRGEVP*GVTDVQ
Trigger: CTGTACGTCGGTGACCCCGCACGGCACCTCGCCACG...CCCATCAAGGAGGAGTTCACGGAGGCCGAGATCCACTGAGGGCCTCGCCTGGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378280.5
ENST00000378285.5
CDS-3UTR CCA 90 bp GTGCTCCGGGACGGTCAAGGTTCGGCCACCAAGGCTCAGGCTGCTCCTCGTGGACCCCATCAGGGGAGGTaGCGGTGGACTGGGCCATCT +
Preference number: 4 (lower is better)
Translates to: VLRDGQGSATKAQAAPRGPHQGR*RWTGPS
Trigger: AGATGGCCCAGTCCACCGCCACCTCCCCTGATGGGG...TCCACGAGGAGCAGCCTGAGCCTTGGTGGCCGAACCTTGACCGTCCCGGAGCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp GGCGGTGGCGCAGGCTGCAGCCAGGCGAGGCCCTCAGTGGATCTCGGCCTCCGTGTCATGCCCTCCAGGTaGAAGACGTCCATGCTGGAA +
Preference number: 4 (lower is better)
Translates to: GGGAGCSQARPSVDLGLRVMPSR*KTSMLE
Trigger: TTCCAGCATGGACGTCTTCCACCTGGAGGGCATGAC...ACGGAGGCCGAGATCCACTGAGGGCCTCGCCTGGCTGCAGCCTGCGCCACCGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354437.8
ENST00000604074.5
CDS-3UTR CCA 90 bp GCCCTTCCCAGGAGCACACTACAGGGGCTCTTGGGACAGCCTCACTGGACTCAGGCTGGCGGCGTGCTCTaGGGTGTAGGGGCTGGCCGA +
Preference number: 4 (lower is better)
Translates to: ALPRSTLQGLLGQPHWTQAGGVL*GVGAGR
Trigger: TCGGCCAGCCCCTACACCCCAGAGCACGCCGCCAGC...CTGAGTCCAGTGAGGCTGTCCCAAGAGCCCCTGTAGTGTGCTCCTGGGAAGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp GCCCTTCCCAGGAGCACACTACAGGGGCTCTTGGGACAGCCTCACTGGACTCAGCGTAGGGCGAGTGGGTaGGCACGCTGGCGGCGTGCT +
Preference number: 4 (lower is better)
Translates to: ALPRSTLQGLLGQPHWTQRRASG*ARWRRA
Trigger: AGCACGCCGCCAGCGTGCCCACCCACTCGCCCTACG...CTGAGTCCAGTGAGGCTGTCCCAAGAGCCCCTGTAGTGTGCTCCTGGGAAGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp GCTGTAGTCGTGGCCCTGCTTCAGGTCCTGCAGGCCCCGCCAGATGGTCATGCGCAGGCGCCGGCGACATaGTGTCGAAGGTGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: AVVVALLQVLQAPPDGHAQAPAT*CRRWSW
Trigger: CCAGCTCCACCTTCGACACCATGTCGCCGGCGCCTG...CGCATGACCATCTGGCGGGGCCTGCAGGACCTGAAGCAGGGCCACGACTACAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR CCA 90 bp GGGCAGGAAGGAGGCGGTCCTGCAGAATACAGCGTGCTGGGGGCAGAGGCCAGTCAGGCGCCGGCGACATaGTGTCGAAGGTGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: GQEGGGPAEYSVLGAEASQAPAT*CRRWSW
Trigger: CCAGCTCCACCTTCGACACCATGTCGCCGGCGCCTG...ACTGGCCTCTGCCCCCAGCACGCTGTATTCTGCAGGACCGCCTCCTTCCTGCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp GGGATGGGCCGGACCTTGCCTTTCCCCGGGCACAGCCCGAAGGTCCTGCCTCCTTCCAGGTGGCTGACTTaGCCGTGCTGGACTGCTGGA +
Preference number: 4 (lower is better)
Translates to: GMGRTLPFPGHSPKVLPPSRWLT*PCWTAG
Trigger: TCCAGCAGTCCAGCACGGCCAAGTCAGCCACCTGGA...AGGAGGCAGGACCTTCGGGCTGTGCCCGGGGAAAGGCAAGGTCCGGCCCATCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000346387.8
ENST00000354437.8
ENST00000357733.7
ENST00000378280.5
ENST00000378285.5
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp ATGGTGATGGTGTGGCGCACGCGGAAGTGCACGGCCTCCATGACCCGCTGGCGCGGGAGTACGTCCAGGTaGCTGACTTGGCCGTGCTGG +
Preference number: 4 (lower is better)
Translates to: MVMVWRTRKCTASMTRWRGSTSR*LTWPCW
Trigger: CCAGCACGGCCAAGTCAGCCACCTGGACGTACTCCC...GCGCCAGCGGGTCATGGAGGCCGTGCACTTCCGCGTGCGCCACACCATCACCAT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR CCA 90 bp GGACCTTGCCTTTCCCCGGGCACAGCCCGAAGGTCCTGCCTCCTGAGGCAGTTTGGCGGTGCCTGGGGGTaGCGGGGTGGACACCTTGAT +
Preference number: 4 (lower is better)
Translates to: GPCLSPGTARRSCLLRQFGGAWG*RGGHLD
Trigger: ATCAAGGTGTCCACCCCGCCACCCCCAGGCACCGCC...AAACTGCCTCAGGAGGCAGGACCTTCGGGCTGTGCCCGGGGAAAGGCAAGGTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000346387.8
ENST00000354437.8
ENST00000357733.7
ENST00000378280.5
ENST00000378285.5
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp TCAACAAGCCCTCTGGAACTGAAGCACATCTGCGCTGGGCTGAGGAACCCCGGGCCGGATGGCGGTGCCTaGGGGTGGCGGGGTGGACAC +
Preference number: 4 (lower is better)
Translates to: STSPLELKHICAGLRNPGPDGGA*GWRGGH
Trigger: GTGTCCACCCCGCCACCCCCAGGCACCGCCATCCGG...CCCGGGGTTCCTCAGCCCAGCGCAGATGTGCTTCAGTTCCAGAGGGCTTGTTGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp GTGTGGCGCACGCGGAAGTGCACGGCCTCCATGACCCGCTGGCGCTGCAGTTCCTCCCGAGCTCGTGGTTaGGGCAGCGTTTCACGACGT +
Preference number: 4 (lower is better)
Translates to: VWRTRKCTASMTRWRCSSSRARG*GSVSRR
Trigger: ACGTCGTGAAACGCTGCCCCAACCACGAGCTCGGGA...GGAACTGCAGCGCCAGCGGGTCATGGAGGCCGTGCACTTCCGCGTGCGCCACAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR CCA 90 bp TCGGGTAGCAGGTGCCCAGCCCCCAAGAGATGGGTGTGGTGCCTGGGGCATGGGTCCCTCCCGAGCTCGTaGTTGGGGCAGCGTTTCACG +
Preference number: 4 (lower is better)
Translates to: SGSRCPAPKRWVWCLGHGSLPSS*LGQRFT
Trigger: CGTGAAACGCTGCCCCAACCACGAGCTCGGGAGGGA...CCCATGCCCCAGGCACCACACCCATCTCTTGGGGGCTGGGCACCTGCTACCCGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp GATGGGCTGCTTGCGGGCCTTGCAGTCGGGCAGGTCGAAGCCGAAGTCCGCCCATCCCTCCCGAGCTCGTaGTTGGGGCAGCGTTTCACG +
Preference number: 4 (lower is better)
Translates to: DGLLAGLAVGQVEAEVRPSLPSS*LGQRFT
Trigger: CGTGAAACGCTGCCCCAACCACGAGCTCGGGAGGGA...TGGGCGGACTTCGGCTTCGACCTGCCCGACTGCAAGGCCCGCAAGCAGCCCATC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR CCA 90 bp ACGCGGAAGTGCACGGCCTCCATGACCCGCTGGCGCTGCAGTTCCCCTGAGCCGTCCACGCGGATGAGGTaGCTGGCTGGAGCAGACTGT +
Preference number: 4 (lower is better)
Translates to: TRKCTASMTRWRCSSPEPSTRMR*LAGADC
Trigger: ACAGTCTGCTCCAGCCAGCCACCTCATCCGCGTGGA...CGGCTCAGGGGAACTGCAGCGCCAGCGGGTCATGGAGGCCGTGCACTTCCGCGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR CCA 90 bp GCCGCCGATGGAGATGGTGGCCGCGTTGCTAGAGCGGAGCAGCTGCTGCGCGGTTCCACGCGGATGAGGTaGCTGGCTGGAGCAGACTGT +
Preference number: 4 (lower is better)
Translates to: AADGDGGRVARAEQLLRGSTRMR*LAGADC
Trigger: ACAGTCTGCTCCAGCCAGCCACCTCATCCGCGTGGA...ACCGCGCAGCAGCTGCTCCGCTCTAGCAACGCGGCCACCATCTCCATCGGCGGC
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR CCA 90 bp GAGCAGCTGCTGCGCGGTGCTGTAGTCGTGGCCCTGCTTCAGGTCCTGCAGGCCCGTCCCCACCTGTGGTaGCTCATAGGGCACCACGAC +
Preference number: 4 (lower is better)
Translates to: EQLLRGAVVVALLQVLQARPHLW*LIGHHD
Trigger: GTCGTGGTGCCCTATGAGCCACCACAGGTGGGGACG...GGCCTGCAGGACCTGAAGCAGGGCCACGACTACAGCACCGCGCAGCAGCTGCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR CCA 90 bp GATGGTGTGGCGCACGCGGAAGTGCACGGCCTCCATGACCCGCTGGCGCTGCAGTTCCGTCCCCACCTGTaGTGGCTCATAGGGCACCAC +
Preference number: 4 (lower is better)
Translates to: DGVAHAEVHGLHDPLALQFRPHL*WLIGHH
Trigger: GTGGTGCCCTATGAGCCACCACAGGTGGGGACGGAA...CTGCAGCGCCAGCGGGTCATGGAGGCCGTGCACTTCCGCGTGCGCCACACCATC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR CCA 90 bp TCGTGGCCCTGCTTCAGGTCCTGCAGGCCCCGCCAGATGGTCATGCGGTACTGCTGGCGGCCCCGTTCTTaGCGGAGCTCTCGTTCAGGG +
Preference number: 4 (lower is better)
Translates to: SWPCFRSCRPRQMVMRYCWRPRS*RSSRSG
Trigger: CCCTGAACGAGAGCTCCGCCAAGAACGGGGCCGCCA...GCAGTACCGCATGACCATCTGGCGGGGCCTGCAGGACCTGAAGCAGGGCCACGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR CCA 90 bp CTCCCCACCCGGCCTTCCTGGGAACAAGTCCCGCCCACCTGGCTTCTCACTCAGTGGCGGCCCCGTTCTTaGCGGAGCTCTCGTTCAGGG +
Preference number: 4 (lower is better)
Translates to: LPTRPSWEQVPPTWLLTQWRPRS*RSSRSG
Trigger: CCCTGAACGAGAGCTCCGCCAAGAACGGGGCCGCCA...CTGAGTGAGAAGCCAGGTGGGCGGGACTTGTTCCCAGGAAGGCCGGGTGGGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp CCTGCACTCTGGGTGGTGTCTCGGCTTGCGTGGGTGAGGGCTCCCATTGGCCCATGGCGGCCCCGTTCTTaGCGGAGCTCTCGTTCAGGG +
Preference number: 4 (lower is better)
Translates to: PALWVVSRLAWVRAPIGPWRPRS*RSSRSG
Trigger: CCCTGAACGAGAGCTCCGCCAAGAACGGGGCCGCCA...TGGGCCAATGGGAGCCCTCACCCACGCAAGCCGAGACACCACCCAGAGTGCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp GTGTCAGGATGGGCCCCCGCGGCTCCTGAAGTGGAACATGGGGGAAGAGTGGGGGCCTCCATGACCCGCTaGCGCTGCAGTTCCCCTGAG +
Preference number: 4 (lower is better)
Translates to: VSGWAPAAPEVEHGGRVGASMTR*RCSSPE
Trigger: CTCAGGGGAACTGCAGCGCCAGCGGGTCATGGAGGC...CCCCACTCTTCCCCCATGTTCCACTTCAGGAGCCGCGGGGGCCCATCCTGACAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp GCAGAGAGAGTCCCCAGCCCCCGGCGCGGGCAAGACGCAGTTAGGGACATTCCCAGGCGAGGCCCTCAGTaGATCTCGGCCTCCGTGAAC +
Preference number: 4 (lower is better)
Translates to: AERVPSPRRGQDAVRDIPRRGPQ*ISASVN
Trigger: GTTCACGGAGGCCGAGATCCACTGAGGGCCTCGCCT...GGGAATGTCCCTAACTGCGTCTTGCCCGCGCCGGGGGCTGGGGACTCTCTCTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp GGACCTTGCCTTTCCCCGGGCACAGCCCGAAGGTCCTGCCTCCTGAGGCAGTTTCACAGGCGGCTTCGGTaGCTGGGCCTTTCCTGGGGC +
Preference number: 4 (lower is better)
Translates to: GPCLSPGTARRSCLLRQFHRRLR*LGLSWG
Trigger: GCCCCAGGAAAGGCCCAGCCACCGAAGCCGCCTGTG...AAACTGCCTCAGGAGGCAGGACCTTCGGGCTGTGCCCGGGGAAAGGCAAGGTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000346387.8
ENST00000354437.8
ENST00000357733.7
ENST00000378280.5
ENST00000378285.5
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp GGGATGGGCCGGACCTTGCCTTTCCCCGGGCACAGCCCGAAGGTCCTGCCTCCTCAGAATACAGCGTGCTaGGGGCAGAGGCCAGTCCCA +
Preference number: 4 (lower is better)
Translates to: GMGRTLPFPGHSPKVLPPQNTAC*GQRPVP
Trigger: TGGGACTGGCCTCTGCCCCCAGCACGCTGTATTCTG...AGGAGGCAGGACCTTCGGGCTGTGCCCGGGGAAAGGCAAGGTCCGGCCCATCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp CTGGAAGTCGGAGCCGACGCTGCGGTCCCCACCCACGCCTGCCATGGAGCACGCTCAGCTTCCTCAGCCTaGCTCATGGGCGCTAGGTTG +
Preference number: 4 (lower is better)
Translates to: LEVGADAAVPTHACHGARSASSA*LMGARL
Trigger: CAACCTAGCGCCCATGAGCCAGGCTGAGGAAGCTGA...GCGTGCTCCATGGCAGGCGTGGGTGGGGACCGCAGCGTCGGCTCCGACTTCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp GCAGAGAGAGTCCCCAGCCCCCGGCGCGGGCAAGACGCAGTTAGGGACATTCCCGCTGCTCCTCGTGGATaGAGGTGGCCCCAGAAAGGG +
Preference number: 4 (lower is better)
Translates to: AERVPSPRRGQDAVRDIPAAPRG*RWPQKG
Trigger: CCCTTTCTGGGGCCACCTCCATCCACGAGGAGCAGC...GGGAATGTCCCTAACTGCGTCTTGCCCGCGCCGGGGGCTGGGGACTCTCTCTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp CCCATTGGCCCACCTGCCTGCAATGAAGGGCCTCGTCACACCCGTGAGGCCCCCAGGCAGCCTGCACTCTaGGTGGTGTCTCGGCTTGCG +
Preference number: 4 (lower is better)
Translates to: PIGPPACNEGPRHTREAPRQPAL*VVSRLA
Trigger: CGCAAGCCGAGACACCACCCAGAGTGCAGGCTGCCT...GGGGGCCTCACGGGTGTGACGAGGCCCTTCATTGCAGGCAGGTGGGCCAATGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp GCTCCGGTTCCCTGCCCTGAAGCTGTGCTCCGGGACGGTCAAGGTTCGGCCACCAGGCAGCCTGCACTCTaGGTGGTGTCTCGGCTTGCG +
Preference number: 4 (lower is better)
Translates to: APVPCPEAVLRDGQGSATRQPAL*VVSRLA
Trigger: CGCAAGCCGAGACACCACCCAGAGTGCAGGCTGCCT...GGTGGCCGAACCTTGACCGTCCCGGAGCACAGCTTCAGGGCAGGGAACCGGAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp GGCAGGAAGGAGGCGGTCCTGCAGAATACAGCGTGCTGGGGGCAGAGGCCAGTCCCTAGGCAGGGGGTGTaGAGCTGGCCGTGCCAGAAG +
Preference number: 4 (lower is better)
Translates to: GRKEAVLQNTACWGQRPVPRQGV*SWPCQK
Trigger: CTTCTGGCACGGCCAGCTCCACACCCCCTGCCTAGG...GACTGGCCTCTGCCCCCAGCACGCTGTATTCTGCAGGACCGCCTCCTTCCTGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp GTGCTCCGGGACGGTCAAGGTTCGGCCACCAAGGCTCAGGCTGCTCCTCGTGGACCTAGGCAGGGGGTGTaGAGCTGGCCGTGCCAGAAG +
Preference number: 4 (lower is better)
Translates to: VLRDGQGSATKAQAAPRGPRQGV*SWPCQK
Trigger: CTTCTGGCACGGCCAGCTCCACACCCCCTGCCTAGG...TCCACGAGGAGCAGCCTGAGCCTTGGTGGCCGAACCTTGACCGTCCCGGAGCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp CTCCCCACCCGGCCTTCCTGGGAACAAGTCCCGCCCACCTGGCTTCTCACTCAGGGAGCCGGAAGGAGCTaGAAGGAAGGGCCAGGCCCT +
Preference number: 4 (lower is better)
Translates to: LPTRPSWEQVPPTWLLTQGAGRS*KEGPGP
Trigger: AGGGCCTGGCCCTTCCTTCCAGCTCCTTCCGGCTCC...CTGAGTGAGAAGCCAGGTGGGCGGGACTTGTTCCCAGGAAGGCCGGGTGGGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp GTGCTCCGGGACGGTCAAGGTTCGGCCACCAAGGCTCAGGCTGCTCCTCGTGGAGTGGCTGCGCCACCCTaGGAAAGCCCCGAGTCTGCT +
Preference number: 4 (lower is better)
Translates to: VLRDGQGSATKAQAAPRGVAAPP*ESPESA
Trigger: AGCAGACTCGGGGCTTTCCCAGGGTGGCGCAGCCAC...TCCACGAGGAGCAGCCTGAGCCTTGGTGGCCGAACCTTGACCGTCCCGGAGCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp GGGCAGGAAGGAGGCGGTCCTGCAGAATACAGCGTGCTGGGGGCAGAGGCCAGTGTGGCTGCGCCACCCTaGGAAAGCCCCGAGTCTGCT +
Preference number: 4 (lower is better)
Translates to: GQEGGGPAEYSVLGAEASVAAPP*ESPESA
Trigger: AGCAGACTCGGGGCTTTCCCAGGGTGGCGCAGCCAC...ACTGGCCTCTGCCCCCAGCACGCTGTATTCTGCAGGACCGCCTCCTTCCTGCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp CAAGCGTGCACCCAGGCGACTGTGCTGTCAGCGGCCCCCGGGGAGGTGGACGGTGATGGGTGTGGTGCCTaGGGCATGGGTCTTAGCCTT +
Preference number: 4 (lower is better)
Translates to: QACTQATVLSAAPGEVDGDGCGA*GMGLSL
Trigger: AAGGCTAAGACCCATGCCCCAGGCACCACACCCATC...ACCGTCCACCTCCCCGGGGGCCGCTGACAGCACAGTCGCCTGGGTGCACGCTTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp TGCGCTGGGCTGAGGAACCCCGGGTGTCAGGATGGGCCCCCGCGGCTCCTGAAGCACTACAGGGGCTCTTaGGACAGCCTCACTGGACTC +
Preference number: 4 (lower is better)
Translates to: CAGLRNPGCQDGPPRLLKHYRGS*DSLTGL
Trigger: GAGTCCAGTGAGGCTGTCCCAAGAGCCCCTGTAGTG...CTTCAGGAGCCGCGGGGGCCCATCCTGACACCCGGGGTTCCTCAGCCCAGCGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp GGGCAGGAAGGAGGCGGTCCTGCAGAATACAGCGTGCTGGGGGCAGAGGCCAGTGCAGCTGGGGCCATCTaGCTGCTCCGTGTTCTGGCC +
Preference number: 4 (lower is better)
Translates to: GQEGGGPAEYSVLGAEASAAGAI*LLRVLA
Trigger: GGCCAGAACACGGAGCAGCCAGATGGCCCCAGCTGC...ACTGGCCTCTGCCCCCAGCACGCTGTATTCTGCAGGACCGCCTCCTTCCTGCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp CCTGCACTCTGGGTGGTGTCTCGGCTTGCGTGGGTGAGGGCTCCCATTGGCCCAGCAGCTGGGGCCATCTaGCTGCTCCGTGTTCTGGCC +
Preference number: 4 (lower is better)
Translates to: PALWVVSRLAWVRAPIGPAAGAI*LLRVLA
Trigger: GGCCAGAACACGGAGCAGCCAGATGGCCCCAGCTGC...TGGGCCAATGGGAGCCCTCACCCACGCAAGCCGAGACACCACCCAGAGTGCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp GGCAGGAAGGAGGCGGTCCTGCAGAATACAGCGTGCTGGGGGCAGAGGCCAGTCGCCTGGTGGGAACGCTaGGGGAATGGGGGAGAGTCG +
Preference number: 4 (lower is better)
Translates to: GRKEAVLQNTACWGQRPVAWWER*GNGGES
Trigger: CGACTCTCCCCCATTCCCCCAGCGTTCCCACCAGGC...GACTGGCCTCTGCCCCCAGCACGCTGTATTCTGCAGGACCGCCTCCTTCCTGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp GTGCTCCGGGACGGTCAAGGTTCGGCCACCAAGGCTCAGGCTGCTCCTCGTGGAGCCTGGTGGGAACGCTaGGGGAATGGGGGAGAGTCG +
Preference number: 4 (lower is better)
Translates to: VLRDGQGSATKAQAAPRGAWWER*GNGGES
Trigger: CGACTCTCCCCCATTCCCCCAGCGTTCCCACCAGGC...TCCACGAGGAGCAGCCTGAGCCTTGGTGGCCGAACCTTGACCGTCCCGGAGCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp GGGCAGGAAGGAGGCGGTCCTGCAGAATACAGCGTGCTGGGGGCAGAGGCCAGTCCAGCAGCCCAGGCCTaGTGGGAACGCTGGGGGAAT +
Preference number: 4 (lower is better)
Translates to: GQEGGGPAEYSVLGAEASPAAQA*WERWGN
Trigger: ATTCCCCCAGCGTTCCCACCAGGCCTGGGCTGCTGG...ACTGGCCTCTGCCCCCAGCACGCTGTATTCTGCAGGACCGCCTCCTTCCTGCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp TGTAGTCGTGGCCCTGCTTCAGGTCCTGCAGGCCCCGCCAGATGGTCATGCGGTCTGTGCGGGGGAGGCTaGCCCACCAGCTGGTTGACG +
Preference number: 4 (lower is better)
Translates to: CSRGPASGPAGPARWSCGLCGGG*PTSWLT
Trigger: CGTCAACCAGCTGGTGGGCCAGCCTCCCCCGCACAG...ACCGCATGACCATCTGGCGGGGCCTGCAGGACCTGAAGCAGGGCCACGACTACA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354437.8
ENST00000378285.5
CDS-3UTR CCA 90 bp TCGGGTAGCAGGTGCCCAGCCCCCAAGAGATGGGTGTGGTGCCTGGGGCATGGGATGGACTGGGCGCTGTaGCTGCTGCTCATCTCGCCG +
Preference number: 4 (lower is better)
Translates to: SGSRCPAPKRWVWCLGHGMDWAL*LLLISP
Trigger: CGGCGAGATGAGCAGCAGCCACAGCGCCCAGTCCAT...CCCATGCCCCAGGCACCACACCCATCTCTTGGGGGCTGGGCACCTGCTACCCGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
CDS-3UTR CCA 90 bp CTCCCCACCCGGCCTTCCTGGGAACAAGTCCCGCCCACCTGGCTTCTCACTCAGCCCGAGACCATGGACTaGGCGCTGTGGCTGCTGCTC +
Preference number: 4 (lower is better)
Translates to: LPTRPSWEQVPPTWLLTQPETMD*ALWLLL
Trigger: GAGCAGCAGCCACAGCGCCCAGTCCATGGTCTCGGG...CTGAGTGAGAAGCCAGGTGGGCGGGACTTGTTCCCAGGAAGGCCGGGTGGGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
CDS-3UTR CCA 90 bp GGGTGTCAGGATGGGCCCCCGCGGCTCCTGAAGTGGAACATGGGGGAAGAGTGGGGTGGCGGAGTGCAGTaGGACCCCGAGACCATGGAC +
Preference number: 4 (lower is better)
Translates to: GCQDGPPRLLKWNMGEEWGGGVQ*DPETMD
Trigger: GTCCATGGTCTCGGGGTCCCACTGCACTCCGCCACC...CCACTCTTCCCCCATGTTCCACTTCAGGAGCCGCGGGGGCCCATCCTGACACCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
CDS-3UTR CCA 90 bp CAGCTGCTGCGCGGTGCTGTAGTCGTGGCCCTGCTTCAGGTCCTGCAGGCCCCGCTCAGCAGATTGAACTaGGCCGTGGCGAGGTGCCGT +
Preference number: 4 (lower is better)
Translates to: QLLRGAVVVALLQVLQAPLSRLN*AVARCR
Trigger: ACGGCACCTCGCCACGGCCCAGTTCAATCTGCTGAG...CGGGGCCTGCAGGACCTGAAGCAGGGCCACGACTACAGCACCGCGCAGCAGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378280.5
ENST00000378285.5
CDS-3UTR CCA 90 bp GGGATGGGCCGGACCTTGCCTTTCCCCGGGCACAGCCCGAAGGTCCTGCCTCCTCTCAGCAGATTGAACTaGGCCGTGGCGAGGTGCCGT +
Preference number: 4 (lower is better)
Translates to: GMGRTLPFPGHSPKVLPPLSRLN*AVARCR
Trigger: ACGGCACCTCGCCACGGCCCAGTTCAATCTGCTGAG...AGGAGGCAGGACCTTCGGGCTGTGCCCGGGGAAAGGCAAGGTCCGGCCCATCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378280.5
ENST00000378285.5
ENST00000378288.8
CDS-3UTR TCA 90 bp CAGCTGCTGCGCGGTGCTGTAGTCGTGGCCCTGCTTCAGGTCCTGCAGGCCCCGCAGACTGTCCTTCGTTaGAGTCCCTCCCGAGCTCGT +
Preference number: 4 (lower is better)
Translates to: QLLRGAVVVALLQVLQAPQTVLR*SPSRAR
Trigger: ACGAGCTCGGGAGGGACTTCAACGAAGGACAGTCTG...CGGGGCCTGCAGGACCTGAAGCAGGGCCACGACTACAGCACCGCGCAGCAGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR TCA 90 bp CTGCTTGCGGGCCTTGCAGTCGGGCAGGTCGAAGCCGAAGTCCGCCCACTCGTCCGCTCTGCCTGCCGGTaGCAGGGTCATCCACATACT +
Preference number: 4 (lower is better)
Translates to: LLAGLAVGQVEAEVRPLVRSACR*QGHPHT
Trigger: AGTATGTGGATGACCCTGTCACCGGCAGGCAGAGCG...GACGAGTGGGCGGACTTCGGCTTCGACCTGCCCGACTGCAAGGCCCGCAAGCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR TCA 90 bp CCCTGCTTCAGGTCCTGCAGGCCCCGCCAGATGGTCATGCGGTACTGCTCGGGGCGCTCTGCCTGCCGGTaGCAGGGTCATCCACATACT +
Preference number: 4 (lower is better)
Translates to: PCFRSCRPRQMVMRYCSGRSACR*QGHPHT
Trigger: AGTATGTGGATGACCCTGTCACCGGCAGGCAGAGCG...CCCCGAGCAGTACCGCATGACCATCTGGCGGGGCCTGCAGGACCTGAAGCAGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR TCA 90 bp ATGGTGATGGTGTGGCGCACGCGGAAGTGCACGGCCTCCATGACCCGCTGGCGCCGCTCTGCCTGCCGGTaGCAGGGTCATCCACATACT +
Preference number: 4 (lower is better)
Translates to: MVMVWRTRKCTASMTRWRRSACR*QGHPHT
Trigger: AGTATGTGGATGACCCTGTCACCGGCAGGCAGAGCG...GCGCCAGCGGGTCATGGAGGCCGTGCACTTCCGCGTGCGCCACACCATCACCAT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR TCA 90 bp CCTTGCAGTCGGGCAGGTCGAAGCCGAAGTCCGCCCACTCGTCAGGGCCGCCGCTGTACAGGATGGTGGTaGATTCCGTCCCCACCTGTG +
Preference number: 4 (lower is better)
Translates to: PCSRAGRSRSPPTRQGRRCTGWW*IPSPPV
Trigger: CACAGGTGGGGACGGAATTCACCACCATCCTGTACA...GCGGCGGCCCTGACGAGTGGGCGGACTTCGGCTTCGACCTGCCCGACTGCAAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR TCA 90 bp GGCCTGGTGGGAACGCTGGGGGAATGGGGGAGAGTCGCTGTTTCTGACCAGAGCGCGCTGCAGTTCCCCTaGGCCGCCGATGGAGATGGT +
Preference number: 4 (lower is better)
Translates to: GLVGTLGEWGRVAVSDQSALQFP*AADGDG
Trigger: ACCATCTCCATCGGCGGCTCAGGGGAACTGCAGCGC...GCTCTGGTCAGAAACAGCGACTCTCCCCCATTCCCCCAGCGTTCCCACCAGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR TCA 90 bp CAGCTGGGGCCATCTGGCTGCTCCGTGTTCTGGCCGGCTTCCTTGGACATCTGGAGTGCACGGCCTCCATaGCCCGCTGGCGCTGCAGTT +
Preference number: 4 (lower is better)
Translates to: QLGPSGCSVFWPASLDIWSARPP*PAGAAV
Trigger: AACTGCAGCGCCAGCGGGTCATGGAGGCCGTGCACT...CCAGATGTCCAAGGAAGCCGGCCAGAACACGGAGCAGCCAGATGGCCCCAGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR TCA 90 bp GCCCTTCCCAGGAGCACACTACAGGGGCTCTTGGGACAGCCTCACTGGACTCAGCGCGGTTGGGGATGGTaGTGGTGTGGCGCACGCGGA +
Preference number: 4 (lower is better)
Translates to: ALPRSTLQGLLGQPHWTQRGWGW*WCGARG
Trigger: TCCGCGTGCGCCACACCATCACCATCCCCAACCGCG...CTGAGTCCAGTGAGGCTGTCCCAAGAGCCCCTGTAGTGTGCTCCTGGGAAGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR TCA 90 bp GTGGCGCACGCGGAAGTGCACGGCCTCCATGACCCGCTGGCGCTGCAGTTCCCCGAAGGTCCTGCCTCCTaGGGCAGTTTTGGACACACA +
Preference number: 4 (lower is better)
Translates to: VAHAEVHGLHDPLALQFPEGPAS*GSFGHT
Trigger: TGTGTGTCCAAAACTGCCTCAGGAGGCAGGACCTTC...GGGGAACTGCAGCGCCAGCGGGTCATGGAGGCCGTGCACTTCCGCGTGCGCCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR TCA 90 bp CCTGCACTCTGGGTGGTGTCTCGGCTTGCGTGGGTGAGGGCTCCCATTGGCCCACTGAGGGGCACTGGCTaGGGCGGTACCACATGCTTC +
Preference number: 4 (lower is better)
Translates to: PALWVVSRLAWVRAPIGPLRGTG*GGTTCF
Trigger: GAAGCATGTGGTACCGCCTCAGCCAGTGCCCCTCAG...TGGGCCAATGGGAGCCCTCACCCACGCAAGCCGAGACACCACCCAGAGTGCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR TCA 90 bp GGGATGGGCCGGACCTTGCCTTTCCCCGGGCACAGCCCGAAGGTCCTGCCTCCTCCTCAGTCTGTTCCCTaGCTGCCACCGCCTAGAAAG +
Preference number: 4 (lower is better)
Translates to: GMGRTLPFPGHSPKVLPPPQSVP*LPPPRK
Trigger: CTTTCTAGGCGGTGGCAGTCAGGGAACAGACTGAGG...AGGAGGCAGGACCTTCGGGCTGTGCCCGGGGAAAGGCAAGGTCCGGCCCATCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR TCA 90 bp GCCCTTCCCAGGAGCACACTACAGGGGCTCTTGGGACAGCCTCACTGGACTCAGCTCGGCTTGCGTGGGTaGGGGCTCCCATTGGCCCAC +
Preference number: 4 (lower is better)
Translates to: ALPRSTLQGLLGQPHWTQLGLRG*GLPLAH
Trigger: GTGGGCCAATGGGAGCCCTCACCCACGCAAGCCGAG...CTGAGTCCAGTGAGGCTGTCCCAAGAGCCCCTGTAGTGTGCTCCTGGGAAGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR TCA 90 bp GCCAGAGCTTCCTGCCCTTCAGCTGGAAGGAGCCGGAAGGAGCTGGAAGGAAGGGCTGCCGCTACTGACTaGTGCCCTGGGCGTGGGCAC +
Preference number: 4 (lower is better)
Translates to: ARASCPSAGRSRKELEGRAAATD*CPGRGH
Trigger: GTGCCCACGCCCAGGGCATCAGTCAGTAGCGGCAGC...CCTTCCTTCCAGCTCCTTCCGGCTCCTTCCAGCTGAAGGGCAGGAAGCTCTGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR TCA 90 bp CCCATTGGCCCACCTGCCTGCAATGAAGGGCCTCGTCACACCCGTGAGGCCCCCCAAGCCCTCTGGAACTaGAGCACATCTGCGCTGGGC +
Preference number: 4 (lower is better)
Translates to: PIGPPACNEGPRHTREAPQALWN*STSALG
Trigger: GCCCAGCGCAGATGTGCTTCAGTTCCAGAGGGCTTG...GGGGGCCTCACGGGTGTGACGAGGCCCTTCATTGCAGGCAGGTGGGCCAATGGG
66% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR TCA 90 bp GCTCCGGTTCCCTGCCCTGAAGCTGTGCTCCGGGACGGTCAAGGTTCGGCCACCCAAGCCCTCTGGAACTaGAGCACATCTGCGCTGGGC +
Preference number: 4 (lower is better)
Translates to: APVPCPEAVLRDGQGSATQALWN*STSALG
Trigger: GCCCAGCGCAGATGTGCTTCAGTTCCAGAGGGCTTG...GGTGGCCGAACCTTGACCGTCCCGGAGCACAGCTTCAGGGCAGGGAACCGGAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR TCA 90 bp ACGCGGAAGTGCACGGCCTCCATGACCCGCTGGCGCTGCAGTTCCCCTGAGCCGTCTGCCTTGCCTCTCTaGGCAGACTCAGGACCACTG +
Preference number: 4 (lower is better)
Translates to: TRKCTASMTRWRCSSPEPSALPL*ADSGPL
Trigger: CAGTGGTCCTGAGTCTGCTCAGAGAGGCAAGGCAGA...CGGCTCAGGGGAACTGCAGCGCCAGCGGGTCATGGAGGCCGTGCACTTCCGCGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000604074.5
CDS-3UTR TCA 90 bp CCCATTGGCCCACCTGCCTGCAATGAAGGGCCTCGTCACACCCGTGAGGCCCCCCGACTTGGACAGATGTaGGCTGACCTGCCTGGCGAG +
Preference number: 4 (lower is better)
Translates to: PIGPPACNEGPRHTREAPRLGQM*ADLPGE
Trigger: CTCGCCAGGCAGGTCAGCTCACATCTGTCCAAGTCG...GGGGGCCTCACGGGTGTGACGAGGCCCTTCATTGCAGGCAGGTGGGCCAATGGG
66% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR TCA 90 bp GAAGGTGGCCGTGGCAAGGGAGGAGCTGCTCCCATGGCAGAGCATTCCTGCAGACGTGGCCATGGTTGTTaGGCATCCCGGGGCCCACGG +
Preference number: 4 (lower is better)
Translates to: EGGRGKGGAAPMAEHSCRRGHGC*ASRGPR
Trigger: CCGTGGGCCCCGGGATGCTCAACAACCATGGCCACG...TCTGCAGGAATGCTCTGCCATGGGAGCAGCTCCTCCCTTGCCACGGCCACCTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378288.8
ENST00000378295.9
CDS-3UTR GCA 90 bp TCGTGGCCCTGCTTCAGGTCCTGCAGGCCCCGCCAGATGGTCATGCGGTACTGCTGGGCCGCCGGTTCATaGCCCCTACACAGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: SWPCFRSCRPRQMVMRYCWAAGS*PLHSCC
Trigger: ACAGCAGCTGTGTAGGGGGCATGAACCGGCGGCCCA...GCAGTACCGCATGACCATCTGGCGGGGCCTGCAGGACCTGAAGCAGGGCCACGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR GCA 90 bp TCCTTGATGGGCTGCTTGCGGGCCTTGCAGTCGGGCAGGTCGAAGCCGAAGTCCCAGGACAGGCGCAGATaGGGCCCTCAAAGGACCGGC +
Preference number: 4 (lower is better)
Translates to: SLMGCLRALQSGRSKPKSQDRRR*GPQRTG
Trigger: GCCGGTCCTTTGAGGGCCGCATCTGCGCCTGTCCTG...GGACTTCGGCTTCGACCTGCCCGACTGCAAGGCCCGCAAGCAGCCCATCAAGGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR GCA 90 bp GTAGTCGTGGCCCTGCTTCAGGTCCTGCAGGCCCCGCCAGATGGTCATGCGGTACCCTGCTTCAGGTCCTaGAGGCCCCGCCAGATGGTC +
Preference number: 4 (lower is better)
Translates to: VVVALLQVLQAPPDGHAVPCFRS*RPRQMV
Trigger: GACCATCTGGCGGGGCCTGCAGGACCTGAAGCAGGG...TACCGCATGACCATCTGGCGGGGCCTGCAGGACCTGAAGCAGGGCCACGACTAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR GCA 90 bp GAAGGTGGCCGTGGCAAGGGAGGAGCTGCTCCCATGGCAGAGCATTCCTGCAGAATGACCCGCTGGCGCTaGAGTTCCCCTGAGCCGCCG +
Preference number: 4 (lower is better)
Translates to: EGGRGKGGAAPMAEHSCRMTRWR*SSPEPP
Trigger: CGGCGGCTCAGGGGAACTGCAGCGCCAGCGGGTCAT...TCTGCAGGAATGCTCTGCCATGGGAGCAGCTCCTCCCTTGCCACGGCCACCTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp CCCTGCTTCAGGTCCTGCAGGCCCCGCCAGATGGTCATGCGGTACTGCTCGGGGTCCTCCTTGATGGGCTaGTTGCGGGCCTTGCAGTCG +
Preference number: 4 (lower is better)
Translates to: PCFRSCRPRQMVMRYCSGSSLMG*LRALQS
Trigger: CGACTGCAAGGCCCGCAAGCAGCCCATCAAGGAGGA...CCCCGAGCAGTACCGCATGACCATCTGGCGGGGCCTGCAGGACCTGAAGCAGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR GCA 90 bp AGGCCCTCAGTGGATCTCGGCCTCCGTGAACTCCTCCTTGATGGGCTGCTTGCGGGATGGGCCGGACCTTaGCTTTCCCCGGGCACAGCC +
Preference number: 4 (lower is better)
Translates to: RPSVDLGLRELLLDGLLAGWAGP*LSPGTA
Trigger: GGCTGTGCCCGGGGAAAGGCAAGGTCCGGCCCATCC...CGCAAGCAGCCCATCAAGGAGGAGTTCACGGAGGCCGAGATCCACTGAGGGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR GCA 90 bp CCCCAAGAGATGGGTGTGGTGCCTGGGGCATGGGTCTTAGCCTTTCTGGTCTCAGTCCCCACCCACGCCTaGCATGGAGCACGCCGGGGC +
Preference number: 4 (lower is better)
Translates to: PQEMGVVPGAWVLAFLVSVPTHA*HGARRG
Trigger: GCCCCGGCGTGCTCCATGGCAGGCGTGGGTGGGGAC...TGAGACCAGAAAGGCTAAGACCCATGCCCCAGGCACCACACCCATCTCTTGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp TCAACAAGCCCTCTGGAACTGAAGCACATCTGCGCTGGGCTGAGGAACCCCGGGAGTCGGAGCCGACGCTaGGGTCCCCACCCACGCCTG +
Preference number: 4 (lower is better)
Translates to: STSPLELKHICAGLRNPGSRSRR*GPHPRL
Trigger: CAGGCGTGGGTGGGGACCGCAGCGTCGGCTCCGACT...CCCGGGGTTCCTCAGCCCAGCGCAGATGTGCTTCAGTTCCAGAGGGCTTGTTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp CTGGAAGTCGGAGCCGACGCTGCGGTCCCCACCCACGCCTGCCATGGAGCACGCATGCCCTGTGGACCTTaGAGTGCTAGAGAAGGTGGC +
Preference number: 4 (lower is better)
Translates to: LEVGADAAVPTHACHGARMPCGP*SAREGG
Trigger: GCCACCTTCTCTAGCACTGCAAGGTCCACAGGGCAT...GCGTGCTCCATGGCAGGCGTGGGTGGGGACCGCAGCGTCGGCTCCGACTTCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp GTGGCGCACGCGGAAGTGCACGGCCTCCATGACCCGCTGGCGCTGCAGTTCCCCATGCCCTGTGGACCTTaGAGTGCTAGAGAAGGTGGC +
Preference number: 4 (lower is better)
Translates to: VAHAEVHGLHDPLALQFPMPCGP*SAREGG
Trigger: GCCACCTTCTCTAGCACTGCAAGGTCCACAGGGCAT...GGGGAACTGCAGCGCCAGCGGGTCATGGAGGCCGTGCACTTCCGCGTGCGCCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000604074.5
CDS-3UTR GCA 90 bp GGGTGTCAGGATGGGCCCCCGCGGCTCCTGAAGTGGAACATGGGGGAAGAGTGGCCCAGAAAGGGCCTGTaGAGACTCTGTCTCCCCGGG +
Preference number: 4 (lower is better)
Translates to: GCQDGPPRLLKWNMGEEWPRKGL*RLCLPG
Trigger: CCCGGGGAGACAGAGTCTGCACAGGCCCTTTCTGGG...CCACTCTTCCCCCATGTTCCACTTCAGGAGCCGCGGGGGCCCATCCTGACACCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp AGAGCGGAGCAGCTGCTGCGCGGTGCTGTAGTCGTGGCCCTGCTTCAGGTCCTGCCCAGAAAGGGCCTGTaGAGACTCTGTCTCCCCGGG +
Preference number: 4 (lower is better)
Translates to: RAEQLLRGAVVVALLQVLPRKGL*RLCLPG
Trigger: CCCGGGGAGACAGAGTCTGCACAGGCCCTTTCTGGG...CAGGACCTGAAGCAGGGCCACGACTACAGCACCGCGCAGCAGCTGCTCCGCTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000604074.5
CDS-3UTR GCA 90 bp CAGCTGGGGCCATCTGGCTGCTCCGTGTTCTGGCCGGCTTCCTTGGACATCTGGCTGCCCCCACAAGCGTaGACCCAGGCGACTGTGCTG +
Preference number: 4 (lower is better)
Translates to: QLGPSGCSVFWPASLDIWLPPQA*TQATVL
Trigger: CAGCACAGTCGCCTGGGTGCACGCTTGTGGGGGCAG...CCAGATGTCCAAGGAAGCCGGCCAGAACACGGAGCAGCCAGATGGCCCCAGCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp GGACCTTGCCTTTCCCCGGGCACAGCCCGAAGGTCCTGCCTCCTGAGGCAGTTTCGACAGCCCCGTTCCTaGTGCCCCCACAAGCGTGCA +
Preference number: 4 (lower is better)
Translates to: GPCLSPGTARRSCLLRQFRQPRS*CPHKRA
Trigger: TGCACGCTTGTGGGGGCAGCAGGAACGGGGCTGTCG...AAACTGCCTCAGGAGGCAGGACCTTCGGGCTGTGCCCGGGGAAAGGCAAGGTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp CTCCCCACCCGGCCTTCCTGGGAACAAGTCCCGCCCACCTGGCTTCTCACTCAGGCGGCCAGAGCTTCCTaGCCTTCAGCTGGAAGGAGC +
Preference number: 4 (lower is better)
Translates to: LPTRPSWEQVPPTWLLTQAARAS*PSAGRS
Trigger: GCTCCTTCCAGCTGAAGGGCAGGAAGCTCTGGCCGC...CTGAGTGAGAAGCCAGGTGGGCGGGACTTGTTCCCAGGAAGGCCGGGTGGGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp GGGCAGGAAGGAGGCGGTCCTGCAGAATACAGCGTGCTGGGGGCAGAGGCCAGTGGCTCCCTAGACAGGTaGAGCTGGGGCCATCTGGCT +
Preference number: 4 (lower is better)
Translates to: GQEGGGPAEYSVLGAEASGSLDR*SWGHLA
Trigger: AGCCAGATGGCCCCAGCTGCACCTGTCTAGGGAGCC...ACTGGCCTCTGCCCCCAGCACGCTGTATTCTGCAGGACCGCCTCCTTCCTGCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp TGCGCTGGGCTGAGGAACCCCGGGTGTCAGGATGGGCCCCCGCGGCTCCTGAAGGAGCTCCTTCTGCCTTaGCTCTCTGAGCAGACTCAG +
Preference number: 4 (lower is better)
Translates to: CAGLRNPGCQDGPPRLLKELLLP*LSEQTQ
Trigger: CTGAGTCTGCTCAGAGAGGCAAGGCAGAAGGAGCTC...CTTCAGGAGCCGCGGGGGCCCATCCTGACACCCGGGGTTCCTCAGCCCAGCGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp GCAGAGAGAGTCCCCAGCCCCCGGCGCGGGCAAGACGCAGTTAGGGACATTCCCTCTGTGCCAGGATACTaGGGGTCGGGCTCCTGGGTA +
Preference number: 4 (lower is better)
Translates to: AERVPSPRRGQDAVRDIPSVPGY*GSGSWV
Trigger: TACCCAGGAGCCCGACCCGCAGTATCCTGGCACAGA...GGGAATGTCCCTAACTGCGTCTTGCCCGCGCCGGGGGCTGGGGACTCTCTCTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp GCCTTGCAGTCGGGCAGGTCGAAGCCGAAGTCCGCCCACTCGTCAGGGCCGCCGTTGTTCATGCCCCCGTaGACCTTGTTCATGGGCGAG +
Preference number: 4 (lower is better)
Translates to: ALQSGRSKPKSAHSSGPPLFMPP*TLFMGE
Trigger: CTCGCCCATGAACAAGGTGCACGGGGGCATGAACAA...CGGCGGCCCTGACGAGTGGGCGGACTTCGGCTTCGACCTGCCCGACTGCAAGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354437.8
ENST00000378285.5
CDS-3UTR GCA 90 bp CCCTGCTTCAGGTCCTGCAGGCCCCGCCAGATGGTCATGCGGTACTGCTCGGGGGCCGTTGGCTGGCACTaGGTGGCCATGGTTGTTGAG +
Preference number: 4 (lower is better)
Translates to: PCFRSCRPRQMVMRYCSGAVGWH*VAMVVE
Trigger: CTCAACAACCATGGCCACGCAGTGCCAGCCAACGGC...CCCCGAGCAGTACCGCATGACCATCTGGCGGGGCCTGCAGGACCTGAAGCAGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
CDS-3UTR GCA 90 bp CTCCCCACCCGGCCTTCCTGGGAACAAGTCCCGCCCACCTGGCTTCTCACTCAGACTGGGCGCTGTGGCTaGTGCTCATCTCGCCGTTGG +
Preference number: 4 (lower is better)
Translates to: LPTRPSWEQVPPTWLLTQTGRCG*CSSRRW
Trigger: CCAACGGCGAGATGAGCAGCAGCCACAGCGCCCAGT...CTGAGTGAGAAGCCAGGTGGGCGGGACTTGTTCCCAGGAAGGCCGGGTGGGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
CDS-3UTR CCA 90 bp AGCCAGGCGAGGCCCTCAGTGGATCTCGGCCTCCGTGAACTCCTCCTTGATGGGCAGGGGAGGTGGCGGTaGACTGGGCCATCTTCCCCA +
Preference number: 4 (lower is better)
Translates to: SQARPSVDLGLRELLLDGQGRWR*TGPSSP
Trigger: TGGGGAAGATGGCCCAGTCCACCGCCACCTCCCCTG...CCCATCAAGGAGGAGTTCACGGAGGCCGAGATCCACTGAGGGCCTCGCCTGGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354437.8
ENST00000604074.5
CDS-3UTR CCA 90 bp TCCTTGATGGGCTGCTTGCGGGCCTTGCAGTCGGGCAGGTCGAAGCCGAAGTCCCAGGGGAGGTGGCGGTaGACTGGGCCATCTTCCCCA +
Preference number: 4 (lower is better)
Translates to: SLMGCLRALQSGRSKPKSQGRWR*TGPSSP
Trigger: TGGGGAAGATGGCCCAGTCCACCGCCACCTCCCCTG...GGACTTCGGCTTCGACCTGCCCGACTGCAAGGCCCGCAAGCAGCCCATCAAGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354437.8
ENST00000604074.5
CDS-3UTR CCA 90 bp GGCCTGGTGGGAACGCTGGGGGAATGGGGGAGAGTCGCTGTTTCTGACCAGAGCCCCCATCAGGGGAGGTaGCGGTGGACTGGGCCATCT +
Preference number: 4 (lower is better)
Translates to: GLVGTLGEWGRVAVSDQSPHQGR*RWTGPS
Trigger: AGATGGCCCAGTCCACCGCCACCTCCCCTGATGGGG...GCTCTGGTCAGAAACAGCGACTCTCCCCCATTCCCCCAGCGTTCCCACCAGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp GCCGCCGATGGAGATGGTGGCCGCGTTGCTAGAGCGGAGCAGCTGCTGCGCGGTGGAAGACGTCCATGCTaGAATCCGTTCCGCCCACCA +
Preference number: 4 (lower is better)
Translates to: AADGDGGRVARAEQLLRGGRRPC*NPFRPP
Trigger: TGGTGGGCGGAACGGATTCCAGCATGGACGTCTTCC...ACCGCGCAGCAGCTGCTCCGCTCTAGCAACGCGGCCACCATCTCCATCGGCGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354437.8
ENST00000604074.5
CDS-3UTR CCA 90 bp GGGCAGGAAGGAGGCGGTCCTGCAGAATACAGCGTGCTGGGGGCAGAGGCCAGTGCGCGGCTGCTCATCTaGTCCATGGTGCTGCTCAGC +
Preference number: 4 (lower is better)
Translates to: GQEGGGPAEYSVLGAEASARLLI*SMVLLS
Trigger: GCTGAGCAGCACCATGGACCAGATGAGCAGCCGCGC...ACTGGCCTCTGCCCCCAGCACGCTGTATTCTGCAGGACCGCCTCCTTCCTGCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp GTAGTCGTGGCCCTGCTTCAGGTCCTGCAGGCCCCGCCAGATGGTCATGCGGTACAGGCGCCGGCGACATaGTGTCGAAGGTGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: VVVALLQVLQAPPDGHAVQAPAT*CRRWSW
Trigger: CCAGCTCCACCTTCGACACCATGTCGCCGGCGCCTG...TACCGCATGACCATCTGGCGGGGCCTGCAGGACCTGAAGCAGGGCCACGACTAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR CCA 90 bp ATGGTGATGGTGTGGCGCACGCGGAAGTGCACGGCCTCCATGACCCGCTGGCGCTCCAGGTGGCTGACTTaGCCGTGCTGGACTGCTGGA +
Preference number: 4 (lower is better)
Translates to: MVMVWRTRKCTASMTRWRSRWLT*PCWTAG
Trigger: TCCAGCAGTCCAGCACGGCCAAGTCAGCCACCTGGA...GCGCCAGCGGGTCATGGAGGCCGTGCACTTCCGCGTGCGCCACACCATCACCAT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR CCA 90 bp CGCTGCAGTTCCCCTGAGCCGCCGATGGAGATGGTGGCCGCGTTGCTAGAGCGGTCCAGGTGGCTGACTTaGCCGTGCTGGACTGCTGGA +
Preference number: 4 (lower is better)
Translates to: RCSSPEPPMEMVAALLERSRWLT*PCWTAG
Trigger: TCCAGCAGTCCAGCACGGCCAAGTCAGCCACCTGGA...CCGCTCTAGCAACGCGGCCACCATCTCCATCGGCGGCTCAGGGGAACTGCAGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR CCA 90 bp GGCCACCAAGGCTCAGGCTGCTCCTCGTGGATGGAGGTGGCCCCAGAAAGGGCCTCCAGGTGGCTGACTTaGCCGTGCTGGACTGCTGGA +
Preference number: 4 (lower is better)
Translates to: GHQGSGCSSWMEVAPERASRWLT*PCWTAG
Trigger: TCCAGCAGTCCAGCACGGCCAAGTCAGCCACCTGGA...GGCCCTTTCTGGGGCCACCTCCATCCACGAGGAGCAGCCTGAGCCTTGGTGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp CGGTGCTGTAGTCGTGGCCCTGCTTCAGGTCCTGCAGGCCCCGCCAGATGGTCAGGGAGTACGTCCAGGTaGCTGACTTGGCCGTGCTGG +
Preference number: 4 (lower is better)
Translates to: RCCSRGPASGPAGPARWSGSTSR*LTWPCW
Trigger: CCAGCACGGCCAAGTCAGCCACCTGGACGTACTCCC...TGACCATCTGGCGGGGCCTGCAGGACCTGAAGCAGGGCCACGACTACAGCACCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR CCA 90 bp AGTTCCCCTGAGCCGCCGATGGAGATGGTGGCCGCGTTGCTAGAGCGGAGCAGCGGGAGTACGTCCAGGTaGCTGACTTGGCCGTGCTGG +
Preference number: 4 (lower is better)
Translates to: SSPEPPMEMVAALLERSSGSTSR*LTWPCW
Trigger: CCAGCACGGCCAAGTCAGCCACCTGGACGTACTCCC...GCTGCTCCGCTCTAGCAACGCGGCCACCATCTCCATCGGCGGCTCAGGGGAACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR CCA 90 bp CGAGGCCCTCAGTGGATCTCGGCCTCCGTGAACTCCTCCTTGATGGGCTGCTTGGGCGGTGCCTGGGGGTaGCGGGGTGGACACCTTGAT +
Preference number: 4 (lower is better)
Translates to: RGPQWISASVNSSLMGCLGGAWG*RGGHLD
Trigger: ATCAAGGTGTCCACCCCGCCACCCCCAGGCACCGCC...CAAGCAGCCCATCAAGGAGGAGTTCACGGAGGCCGAGATCCACTGAGGGCCTCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR CCA 90 bp CCCCAAGAGATGGGTGTGGTGCCTGGGGCATGGGTCTTAGCCTTTCTGGTCTCACCGGATGGCGGTGCCTaGGGGTGGCGGGGTGGACAC +
Preference number: 4 (lower is better)
Translates to: PQEMGVVPGAWVLAFLVSPDGGA*GWRGGH
Trigger: GTGTCCACCCCGCCACCCCCAGGCACCGCCATCCGG...TGAGACCAGAAAGGCTAAGACCCATGCCCCAGGCACCACACCCATCTCTTGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp CTACAGGGGCTCTTGGGACAGCCTCACTGGACTCAGGGTGGACAGGTAACGTACCCGGATGGCGGTGCCTaGGGGTGGCGGGGTGGACAC +
Preference number: 4 (lower is better)
Translates to: LQGLLGQPHWTQGGQVTYPDGGA*GWRGGH
Trigger: GTGTCCACCCCGCCACCCCCAGGCACCGCCATCCGG...GTACGTTACCTGTCCACCCTGAGTCCAGTGAGGCTGTCCCAAGAGCCCCTGTAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp AGCACACTACAGGGGCTCTTGGGACAGCCTCACTGGACTCAGGGTGGACAGGTACAGGCATGGCCCGGATaGCGGTGCCTGGGGGTGGCG +
Preference number: 4 (lower is better)
Translates to: STLQGLLGQPHWTQGGQVQAWPG*RCLGVA
Trigger: CGCCACCCCCAGGCACCGCCATCCGGGCCATGCCTG...TACCTGTCCACCCTGAGTCCAGTGAGGCTGTCCCAAGAGCCCCTGTAGTGTGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp CTGCTTGCGGGCCTTGCAGTCGGGCAGGTCGAAGCCGAAGTCCGCCCACTCGTCTCCCGAGCTCGTGGTTaGGGCAGCGTTTCACGACGT +
Preference number: 4 (lower is better)
Translates to: LLAGLAVGQVEAEVRPLVSRARG*GSVSRR
Trigger: ACGTCGTGAAACGCTGCCCCAACCACGAGCTCGGGA...GACGAGTGGGCGGACTTCGGCTTCGACCTGCCCGACTGCAAGGCCCGCAAGCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR CCA 90 bp GTGCTCCGGGACGGTCAAGGTTCGGCCACCAAGGCTCAGGCTGCTCCTCGTGGATCCCTCCCGAGCTCGTaGTTGGGGCAGCGTTTCACG +
Preference number: 4 (lower is better)
Translates to: VLRDGQGSATKAQAAPRGSLPSS*LGQRFT
Trigger: CGTGAAACGCTGCCCCAACCACGAGCTCGGGAGGGA...TCCACGAGGAGCAGCCTGAGCCTTGGTGGCCGAACCTTGACCGTCCCGGAGCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp GATGGGCTGCTTGCGGGCCTTGCAGTCGGGCAGGTCGAAGCCGAAGTCCGCCCATCCACGCGGATGAGGTaGCTGGCTGGAGCAGACTGT +
Preference number: 4 (lower is better)
Translates to: DGLLAGLAVGQVEAEVRPSTRMR*LAGADC
Trigger: ACAGTCTGCTCCAGCCAGCCACCTCATCCGCGTGGA...TGGGCGGACTTCGGCTTCGACCTGCCCGACTGCAAGGCCCGCAAGCAGCCCATC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR CCA 90 bp CGCTGCAGTTCCCCTGAGCCGCCGATGGAGATGGTGGCCGCGTTGCTAGAGCGGTTCCGTCCCCACCTGTaGTGGCTCATAGGGCACCAC +
Preference number: 4 (lower is better)
Translates to: RCSSPEPPMEMVAALLERFRPHL*WLIGHH
Trigger: GTGGTGCCCTATGAGCCACCACAGGTGGGGACGGAA...CCGCTCTAGCAACGCGGCCACCATCTCCATCGGCGGCTCAGGGGAACTGCAGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR CCA 90 bp CAGCTGGGGCCATCTGGCTGCTCCGTGTTCTGGCCGGCTTCCTTGGACATCTGGGCAGGCCCCGCCAGATaGTCATGCGGTACTGCTCGG +
Preference number: 4 (lower is better)
Translates to: QLGPSGCSVFWPASLDIWAGPAR*SCGTAR
Trigger: CCGAGCAGTACCGCATGACCATCTGGCGGGGCCTGC...CCAGATGTCCAAGGAAGCCGGCCAGAACACGGAGCAGCCAGATGGCCCCAGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp GGACGGTGGGAGAGGGATGCCTGCGTCTTCGTAGACCAGGTACCTGCGGCAACACCCCTGAGCCGCCGATaGAGATGGTGGCCGCGTTGC +
Preference number: 4 (lower is better)
Translates to: GRWERDACVFVDQVPAATPLSRR*RWWPRC
Trigger: GCAACGCGGCCACCATCTCCATCGGCGGCTCAGGGG...TGTTGCCGCAGGTACCTGGTCTACGAAGACGCAGGCATCCCTCTCCCACCGTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp CGGTGCTGTAGTCGTGGCCCTGCTTCAGGTCCTGCAGGCCCCGCCAGATGGTCAGGGATGGTGATGGTGTaGCGCACGCGGAAGTGCACG +
Preference number: 4 (lower is better)
Translates to: RCCSRGPASGPAGPARWSGMVMV*RTRKCT
Trigger: CGTGCACTTCCGCGTGCGCCACACCATCACCATCCC...TGACCATCTGGCGGGGCCTGCAGGACCTGAAGCAGGGCCACGACTACAGCACCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR CCA 90 bp CGGTGCTGTAGTCGTGGCCCTGCTTCAGGTCCTGCAGGCCCCGCCAGATGGTCAAGGCGAGGCCCTCAGTaGATCTCGGCCTCCGTGAAC +
Preference number: 4 (lower is better)
Translates to: RCCSRGPASGPAGPARWSRRGPQ*ISASVN
Trigger: GTTCACGGAGGCCGAGATCCACTGAGGGCCTCGCCT...TGACCATCTGGCGGGGCCTGCAGGACCTGAAGCAGGGCCACGACTACAGCACCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR CCA 90 bp CTCCCCACCCGGCCTTCCTGGGAACAAGTCCCGCCCACCTGGCTTCTCACTCAGAGGCGAGGCCCTCAGTaGATCTCGGCCTCCGTGAAC +
Preference number: 4 (lower is better)
Translates to: LPTRPSWEQVPPTWLLTQRRGPQ*ISASVN
Trigger: GTTCACGGAGGCCGAGATCCACTGAGGGCCTCGCCT...CTGAGTGAGAAGCCAGGTGGGCGGGACTTGTTCCCAGGAAGGCCGGGTGGGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp ACCTTGCCTTTCCCCGGGCACAGCCCGAAGGTCCTGCCTCCTGAGGCAGTTTTGCACAGGCGGCTTCGGTaGCTGGGCCTTTCCTGGGGC +
Preference number: 4 (lower is better)
Translates to: TLPFPGHSPKVLPPEAVLHRRLR*LGLSWG
Trigger: GCCCCAGGAAAGGCCCAGCCACCGAAGCCGCCTGTG...CAAAACTGCCTCAGGAGGCAGGACCTTCGGGCTGTGCCCGGGGAAAGGCAAGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000346387.8
ENST00000354437.8
ENST00000357733.7
ENST00000378280.5
ENST00000378285.5
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp CCTGCACTCTGGGTGGTGTCTCGGCTTGCGTGGGTGAGGGCTCCCATTGGCCCACCTCGTGGATGGAGGTaGCCCCAGAAAGGGCCTGTG +
Preference number: 4 (lower is better)
Translates to: PALWVVSRLAWVRAPIGPPRGWR*PQKGPV
Trigger: CACAGGCCCTTTCTGGGGCCACCTCCATCCACGAGG...TGGGCCAATGGGAGCCCTCACCCACGCAAGCCGAGACACCACCCAGAGTGCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp CTTCAGGAGGTGGCCTCGGGTAGCAGGTGCCCAGCCCCCAAGAGATGGGTGTGGGCTGCTCCTCGTGGATaGAGGTGGCCCCAGAAAGGG +
Preference number: 4 (lower is better)
Translates to: LQEVASGSRCPAPKRWVWAAPRG*RWPQKG
Trigger: CCCTTTCTGGGGCCACCTCCATCCACGAGGAGCAGC...CCACACCCATCTCTTGGGGGCTGGGCACCTGCTACCCGAGGCCACCTCCTGAAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp GGGCAGGAAGGAGGCGGTCCTGCAGAATACAGCGTGCTGGGGGCAGAGGCCAGTAGGCAGCCTGCACTCTaGGTGGTGTCTCGGCTTGCG +
Preference number: 4 (lower is better)
Translates to: GQEGGGPAEYSVLGAEASRQPAL*VVSRLA
Trigger: CGCAAGCCGAGACACCACCCAGAGTGCAGGCTGCCT...ACTGGCCTCTGCCCCCAGCACGCTGTATTCTGCAGGACCGCCTCCTTCCTGCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp GGTGCTGTAGTCGTGGCCCTGCTTCAGGTCCTGCAGGCCCCGCCAGATGGTCATGGAGCCGGAAGGAGCTaGAAGGAAGGGCCAGGCCCT +
Preference number: 4 (lower is better)
Translates to: GAVVVALLQVLQAPPDGHGAGRS*KEGPGP
Trigger: AGGGCCTGGCCCTTCCTTCCAGCTCCTTCCGGCTCC...ATGACCATCTGGCGGGGCCTGCAGGACCTGAAGCAGGGCCACGACTACAGCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000604074.5
CDS-3UTR CCA 90 bp GGGATGGGCCGGACCTTGCCTTTCCCCGGGCACAGCCCGAAGGTCCTGCCTCCTGATGGGTGTGGTGCCTaGGGCATGGGTCTTAGCCTT +
Preference number: 4 (lower is better)
Translates to: GMGRTLPFPGHSPKVLPPDGCGA*GMGLSL
Trigger: AAGGCTAAGACCCATGCCCCAGGCACCACACCCATC...AGGAGGCAGGACCTTCGGGCTGTGCCCGGGGAAAGGCAAGGTCCGGCCCATCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp CCGCCGATGGAGATGGTGGCCGCGTTGCTAGAGCGGAGCAGCTGCTGCGCGGTGGATGGGTGTGGTGCCTaGGGCATGGGTCTTAGCCTT +
Preference number: 4 (lower is better)
Translates to: PPMEMVAALLERSSCCAVDGCGA*GMGLSL
Trigger: AAGGCTAAGACCCATGCCCCAGGCACCACACCCATC...CACCGCGCAGCAGCTGCTCCGCTCTAGCAACGCGGCCACCATCTCCATCGGCGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604074.5
CDS-3UTR CCA 90 bp ACCTTGCCTTTCCCCGGGCACAGCCCGAAGGTCCTGCCTCCTGAGGCAGTTTTGGGGGGCTTCAGGAGGTaGCCTCGGGTAGCAGGTGCC +
Preference number: 4 (lower is better)
Translates to: TLPFPGHSPKVLPPEAVLGGFRR*PRVAGA
Trigger: GGCACCTGCTACCCGAGGCCACCTCCTGAAGCCCCC...CAAAACTGCCTCAGGAGGCAGGACCTTCGGGCTGTGCCCGGGGAAAGGCAAGGT
66% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp GAAGGTGGCCGTGGCAAGGGAGGAGCTGCTCCCATGGCAGAGCATTCCTGCAGAGGGGGCTTCAGGAGGTaGCCTCGGGTAGCAGGTGCC +
Preference number: 4 (lower is better)
Translates to: EGGRGKGGAAPMAEHSCRGGFRR*PRVAGA
Trigger: GGCACCTGCTACCCGAGGCCACCTCCTGAAGCCCCC...TCTGCAGGAATGCTCTGCCATGGGAGCAGCTCCTCCCTTGCCACGGCCACCTTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp GCTCCGGTTCCCTGCCCTGAAGCTGTGCTCCGGGACGGTCAAGGTTCGGCCACCGGCTGCTCCGTGTTCTaGCCGGCTTCCTTGGACATC +
Preference number: 4 (lower is better)
Translates to: APVPCPEAVLRDGQGSATGCSVF*PASLDI
Trigger: GATGTCCAAGGAAGCCGGCCAGAACACGGAGCAGCC...GGTGGCCGAACCTTGACCGTCCCGGAGCACAGCTTCAGGGCAGGGAACCGGAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp GGACCTTGCCTTTCCCCGGGCACAGCCCGAAGGTCCTGCCTCCTGAGGCAGTTTGCAGCTGGGGCCATCTaGCTGCTCCGTGTTCTGGCC +
Preference number: 4 (lower is better)
Translates to: GPCLSPGTARRSCLLRQFAAGAI*LLRVLA
Trigger: GGCCAGAACACGGAGCAGCCAGATGGCCCCAGCTGC...AAACTGCCTCAGGAGGCAGGACCTTCGGGCTGTGCCCGGGGAAAGGCAAGGTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp TGTAGTCGTGGCCCTGCTTCAGGTCCTGCAGGCCCCGCCAGATGGTCATGCGGTTGCGGGTCGGGCTCCTaGGTACAGCAAGGGCTTCCC +
Preference number: 4 (lower is better)
Translates to: CSRGPASGPAGPARWSCGCGSGS*VQQGLP
Trigger: GGGAAGCCCTTGCTGTACCCAGGAGCCCGACCCGCA...ACCGCATGACCATCTGGCGGGGCCTGCAGGACCTGAAGCAGGGCCACGACTACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000604074.5
CDS-3UTR CCA 90 bp GCTGTAGTCGTGGCCCTGCTTCAGGTCCTGCAGGCCCCGCCAGATGGTCATGCGCGTGCACCTTGTTCATaGGCGAGAGGACCGGCCCGT +
Preference number: 4 (lower is better)
Translates to: AVVVALLQVLQAPPDGHARAPCS*ARGPAR
Trigger: ACGGGCCGGTCCTCTCGCCCATGAACAAGGTGCACG...CGCATGACCATCTGGCGGGGCCTGCAGGACCTGAAGCAGGGCCACGACTACAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354437.8
ENST00000378285.5
CDS-3UTR CCA 90 bp GGGTGTCAGGATGGGCCCCCGCGGCTCCTGAAGTGGAACATGGGGGAAGAGTGGCGTGCACCTTGTTCATaGGCGAGAGGACCGGCCCGT +
Preference number: 4 (lower is better)
Translates to: GCQDGPPRLLKWNMGEEWRAPCS*ARGPAR
Trigger: ACGGGCCGGTCCTCTCGCCCATGAACAAGGTGCACG...CCACTCTTCCCCCATGTTCCACTTCAGGAGCCGCGGGGGCCCATCCTGACACCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000378288.8
ENST00000378295.9
CDS-3UTR CCA 90 bp ATGGTGATGGTGTGGCGCACGCGGAAGTGCACGGCCTCCATGACCCGCTGGCGCTGCTCATCTCGCCGTTaGCTGGCACTGCGTGGCCAT +
Preference number: 4 (lower is better)
Translates to: MVMVWRTRKCTASMTRWRCSSRR*LALRGH
Trigger: ATGGCCACGCAGTGCCAGCCAACGGCGAGATGAGCA...GCGCCAGCGGGTCATGGAGGCCGTGCACTTCCGCGTGCGCCACACCATCACCAT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
CDS-3UTR CCA 90 bp GCAGAGAGAGTCCCCAGCCCCCGGCGCGGGCAAGACGCAGTTAGGGACATTCCCTGCTCATCTCGCCGTTaGCTGGCACTGCGTGGCCAT +
Preference number: 4 (lower is better)
Translates to: AERVPSPRRGQDAVRDIPCSSRR*LALRGH
Trigger: ATGGCCACGCAGTGCCAGCCAACGGCGAGATGAGCA...GGGAATGTCCCTAACTGCGTCTTGCCCGCGCCGGGGGCTGGGGACTCTCTCTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
CDS-3UTR CCA 90 bp CTCCCCACCCGGCCTTCCTGGGAACAAGTCCCGCCCACCTGGCTTCTCACTCAGATGGACTGGGCGCTGTaGCTGCTGCTCATCTCGCCG +
Preference number: 4 (lower is better)
Translates to: LPTRPSWEQVPPTWLLTQMDWAL*LLLISP
Trigger: CGGCGAGATGAGCAGCAGCCACAGCGCCCAGTCCAT...CTGAGTGAGAAGCCAGGTGGGCGGGACTTGTTCCCAGGAAGGCCGGGTGGGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
CDS-3UTR CCA 90 bp CGGTGCTGTAGTCGTGGCCCTGCTTCAGGTCCTGCAGGCCCCGCCAGATGGTCAATGGACTGGGCGCTGTaGCTGCTGCTCATCTCGCCG +
Preference number: 4 (lower is better)
Translates to: RCCSRGPASGPAGPARWSMDWAL*LLLISP
Trigger: CGGCGAGATGAGCAGCAGCCACAGCGCCCAGTCCAT...TGACCATCTGGCGGGGCCTGCAGGACCTGAAGCAGGGCCACGACTACAGCACCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
CDS-3UTR CCA 90 bp CAGCTGGGGCCATCTGGCTGCTCCGTGTTCTGGCCGGCTTCCTTGGACATCTGGGGTGGCGGAGTGCAGTaGGACCCCGAGACCATGGAC +
Preference number: 4 (lower is better)
Translates to: QLGPSGCSVFWPASLDIWGGGVQ*DPETMD
Trigger: GTCCATGGTCTCGGGGTCCCACTGCACTCCGCCACC...CCAGATGTCCAAGGAAGCCGGCCAGAACACGGAGCAGCCAGATGGCCCCAGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
CDS-3UTR CCA 90 bp AGCCAGGCGAGGCCCTCAGTGGATCTCGGCCTCCGTGAACTCCTCCTTGATGGGGGTGGCGGAGTGCAGTaGGACCCCGAGACCATGGAC +
Preference number: 4 (lower is better)
Translates to: SQARPSVDLGLRELLLDGGGGVQ*DPETMD
Trigger: GTCCATGGTCTCGGGGTCCCACTGCACTCCGCCACC...CCCATCAAGGAGGAGTTCACGGAGGCCGAGATCCACTGAGGGCCTCGCCTGGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
CDS-3UTR CCA 90 bp GGCCTGGTGGGAACGCTGGGGGAATGGGGGAGAGTCGCTGTTTCTGACCAGAGCGGTGGCGGAGTGCAGTaGGACCCCGAGACCATGGAC +
Preference number: 4 (lower is better)
Translates to: GLVGTLGEWGRVAVSDQSGGGVQ*DPETMD
Trigger: GTCCATGGTCTCGGGGTCCCACTGCACTCCGCCACC...GCTCTGGTCAGAAACAGCGACTCTCCCCCATTCCCCCAGCGTTCCCACCAGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
CDS-3UTR TCA 90 bp CAAGCGTGCACCCAGGCGACTGTGCTGTCAGCGGCCCCCGGGGAGGTGGACGGTATTATTCCCCCGGCTTaGCTGGGGAAGGTCGAAGTA +
Preference number: 4 (lower is better)
Translates to: QACTQATVLSAAPGEVDGIIPPA*LGKVEV
Trigger: TACTTCGACCTTCCCCAGTCAAGCCGGGGGAATAAT...ACCGTCCACCTCCCCGGGGGCCGCTGACAGCACAGTCGCCTGGGTGCACGCTTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378295.9
ENST00000604074.5
CDS-3UTR TCA 90 bp TCGGGTAGCAGGTGCCCAGCCCCCAAGAGATGGGTGTGGTGCCTGGGGCATGGGCAGACTGTCCTTCGTTaGAGTCCCTCCCGAGCTCGT +
Preference number: 4 (lower is better)
Translates to: SGSRCPAPKRWVWCLGHGQTVLR*SPSRAR
Trigger: ACGAGCTCGGGAGGGACTTCAACGAAGGACAGTCTG...CCCATGCCCCAGGCACCACACCCATCTCTTGGGGGCTGGGCACCTGCTACCCGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR TCA 90 bp GGACGGTGGGAGAGGGATGCCTGCGTCTTCGTAGACCAGGTACCTGCGGCAACATGCCTTCCACGCGGATaGGGTGGCTGGCTGGAGCAG +
Preference number: 4 (lower is better)
Translates to: GRWERDACVFVDQVPAATCLPRG*GGWLEQ
Trigger: CTGCTCCAGCCAGCCACCTCATCCGCGTGGAAGGCA...TGTTGCCGCAGGTACCTGGTCTACGAAGACGCAGGCATCCCTCTCCCACCGTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR TCA 90 bp GAAGGTGGCCGTGGCAAGGGAGGAGCTGCTCCCATGGCAGAGCATTCCTGCAGAGCGCTGCAGTTCCCCTaGGCCGCCGATGGAGATGGT +
Preference number: 4 (lower is better)
Translates to: EGGRGKGGAAPMAEHSCRALQFP*AADGDG
Trigger: ACCATCTCCATCGGCGGCTCAGGGGAACTGCAGCGC...TCTGCAGGAATGCTCTGCCATGGGAGCAGCTCCTCCCTTGCCACGGCCACCTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR TCA 90 bp GCCCTTCCCAGGAGCACACTACAGGGGCTCTTGGGACAGCCTCACTGGACTCAGGCGCTGCAGTTCCCCTaGGCCGCCGATGGAGATGGT +
Preference number: 4 (lower is better)
Translates to: ALPRSTLQGLLGQPHWTQALQFP*AADGDG
Trigger: ACCATCTCCATCGGCGGCTCAGGGGAACTGCAGCGC...CTGAGTCCAGTGAGGCTGTCCCAAGAGCCCCTGTAGTGTGCTCCTGGGAAGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR TCA 90 bp GCCCTTCCCAGGAGCACACTACAGGGGCTCTTGGGACAGCCTCACTGGACTCAGAGTGCACGGCCTCCATaGCCCGCTGGCGCTGCAGTT +
Preference number: 4 (lower is better)
Translates to: ALPRSTLQGLLGQPHWTQSARPP*PAGAAV
Trigger: AACTGCAGCGCCAGCGGGTCATGGAGGCCGTGCACT...CTGAGTCCAGTGAGGCTGTCCCAAGAGCCCCTGTAGTGTGCTCCTGGGAAGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR TCA 90 bp GGACCTTGCCTTTCCCCGGGCACAGCCCGAAGGTCCTGCCTCCTGAGGCAGTTTCTGAGGGGCACTGGCTaGGGCGGTACCACATGCTTC +
Preference number: 4 (lower is better)
Translates to: GPCLSPGTARRSCLLRQFLRGTG*GGTTCF
Trigger: GAAGCATGTGGTACCGCCTCAGCCAGTGCCCCTCAG...AAACTGCCTCAGGAGGCAGGACCTTCGGGCTGTGCCCGGGGAAAGGCAAGGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR TCA 90 bp GGACGGTGGGAGAGGGATGCCTGCGTCTTCGTAGACCAGGTACCTGCGGCAACAGCTGTCCCTTTCTGCTaGGGGGTCCCCGAGGAGAGG +
Preference number: 4 (lower is better)
Translates to: GRWERDACVFVDQVPAATAVPFC*GVPEER
Trigger: CCTCTCCTCGGGGACCCCTCAGCAGAAAGGGACAGC...TGTTGCCGCAGGTACCTGGTCTACGAAGACGCAGGCATCCCTCTCCCACCGTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR TCA 90 bp CCCATTGGCCCACCTGCCTGCAATGAAGGGCCTCGTCACACCCGTGAGGCCCCCCCTCAGTCTGTTCCCTaGCTGCCACCGCCTAGAAAG +
Preference number: 4 (lower is better)
Translates to: PIGPPACNEGPRHTREAPPQSVP*LPPPRK
Trigger: CTTTCTAGGCGGTGGCAGTCAGGGAACAGACTGAGG...GGGGGCCTCACGGGTGTGACGAGGCCCTTCATTGCAGGCAGGTGGGCCAATGGG
64% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR TCA 90 bp TCAACAAGCCCTCTGGAACTGAAGCACATCTGCGCTGGGCTGAGGAACCCCGGGTCCGGTTCCCTGCCCTaGAGCTGTGCTCCGGGACGG +
Preference number: 4 (lower is better)
Translates to: STSPLELKHICAGLRNPGSGSLP*SCAPGR
Trigger: CCGTCCCGGAGCACAGCTTCAGGGCAGGGAACCGGA...CCCGGGGTTCCTCAGCCCAGCGCAGATGTGCTTCAGTTCCAGAGGGCTTGTTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR TCA 90 bp GCCAGAGCTTCCTGCCCTTCAGCTGGAAGGAGCCGGAAGGAGCTGGAAGGAAGGCCCACCTGCCTGCAATaGAGGGCCTCGTCACACCCG +
Preference number: 4 (lower is better)
Translates to: ARASCPSAGRSRKELEGRPTCLQ*RASSHP
Trigger: CGGGTGTGACGAGGCCCTTCATTGCAGGCAGGTGGG...CCTTCCTTCCAGCTCCTTCCGGCTCCTTCCAGCTGAAGGGCAGGAAGCTCTGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR TCA 90 bp GGACGGTGGGAGAGGGATGCCTGCGTCTTCGTAGACCAGGTACCTGCGGCAACACCCACCTGCCTGCAATaGAGGGCCTCGTCACACCCG +
Preference number: 4 (lower is better)
Translates to: GRWERDACVFVDQVPAATPTCLQ*RASSHP
Trigger: CGGGTGTGACGAGGCCCTTCATTGCAGGCAGGTGGG...TGTTGCCGCAGGTACCTGGTCTACGAAGACGCAGGCATCCCTCTCCCACCGTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR TCA 90 bp GAAGGTGGCCGTGGCAAGGGAGGAGCTGCTCCCATGGCAGAGCATTCCTGCAGAACATCTGCGCTGGGCTaGGGAACCCCGGGTGTCAGG +
Preference number: 4 (lower is better)
Translates to: EGGRGKGGAAPMAEHSCRTSALG*GTPGVR
Trigger: CCTGACACCCGGGGTTCCTCAGCCCAGCGCAGATGT...TCTGCAGGAATGCTCTGCCATGGGAGCAGCTCCTCCCTTGCCACGGCCACCTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR TCA 90 bp GGACGGTGGGAGAGGGATGCCTGCGTCTTCGTAGACCAGGTACCTGCGGCAACAACATCTGCGCTGGGCTaGGGAACCCCGGGTGTCAGG +
Preference number: 4 (lower is better)
Translates to: GRWERDACVFVDQVPAATTSALG*GTPGVR
Trigger: CCTGACACCCGGGGTTCCTCAGCCCAGCGCAGATGT...TGTTGCCGCAGGTACCTGGTCTACGAAGACGCAGGCATCCCTCTCCCACCGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR TCA 90 bp CCTGCACTCTGGGTGGTGTCTCGGCTTGCGTGGGTGAGGGCTCCCATTGGCCCACGACTTGGACAGATGTaGGCTGACCTGCCTGGCGAG +
Preference number: 4 (lower is better)
Translates to: PALWVVSRLAWVRAPIGPRLGQM*ADLPGE
Trigger: CTCGCCAGGCAGGTCAGCTCACATCTGTCCAAGTCG...TGGGCCAATGGGAGCCCTCACCCACGCAAGCCGAGACACCACCCAGAGTGCAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR TCA 90 bp GGGATGGGCCGGACCTTGCCTTTCCCCGGGCACAGCCCGAAGGTCCTGCCTCCTGAGAGTCGCTGTTTCTaGCCAGAGCGACTTGGACAG +
Preference number: 4 (lower is better)
Translates to: GMGRTLPFPGHSPKVLPPESRCF*PERLGQ
Trigger: CTGTCCAAGTCGCTCTGGTCAGAAACAGCGACTCTC...AGGAGGCAGGACCTTCGGGCTGTGCCCGGGGAAAGGCAAGGTCCGGCCCATCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR TCA 90 bp GGCAGGAAGGAGGCGGTCCTGCAGAATACAGCGTGCTGGGGGCAGAGGCCAGTCTGCTGCTCAGCAGATTaGACTGGGCCGTGGCGAGGT +
Preference number: 4 (lower is better)
Translates to: GRKEAVLQNTACWGQRPVCCSAD*TGPWRG
Trigger: ACCTCGCCACGGCCCAGTTCAATCTGCTGAGCAGCA...GACTGGCCTCTGCCCCCAGCACGCTGTATTCTGCAGGACCGCCTCCTTCCTGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000378288.8
CDS-3UTR GCA 90 bp GGCCACCAAGGCTCAGGCTGCTCCTCGTGGATGGAGGTGGCCCCAGAAAGGGCCAGAGAGCTCCAGAGGTaGTCAAACGTGGTGCCCCCA +
Preference number: 4 (lower is better)
Translates to: GHQGSGCSSWMEVAPERARELQR*SNVVPP
Trigger: TGGGGGCACCACGTTTGAGCACCTCTGGAGCTCTCT...GGCCCTTTCTGGGGCCACCTCCATCCACGAGGAGCAGCCTGAGCCTTGGTGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp TGCGCTGGGCTGAGGAACCCCGGGTGTCAGGATGGGCCCCCGCGGCTCCTGAAGGAAGGTCGAAGTAGGTaGTGTCTGGTTCCAGAGAGC +
Preference number: 4 (lower is better)
Translates to: CAGLRNPGCQDGPPRLLKEGRSR*CLVPES
Trigger: GCTCTCTGGAACCAGACAGCACCTACTTCGACCTTC...CTTCAGGAGCCGCGGGGGCCCATCCTGACACCCGGGGTTCCTCAGCCCAGCGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp GATGGGCTGCTTGCGGGCCTTGCAGTCGGGCAGGTCGAAGCCGAAGTCCGCCCAGGTGGAAGACGTCCATaGTGGAATCCGTTCCGCCCA +
Preference number: 4 (lower is better)
Translates to: DGLLAGLAVGQVEAEVRPGGRRP*WNPFRP
Trigger: TGGGCGGAACGGATTCCAGCATGGACGTCTTCCACC...TGGGCGGACTTCGGCTTCGACCTGCCCGACTGCAAGGCCCGCAAGCAGCCCATC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354437.8
ENST00000604074.5
CDS-3UTR GCA 90 bp TCGGGTAGCAGGTGCCCAGCCCCCAAGAGATGGGTGTGGTGCCTGGGGCATGGGGGTGGAAGACGTCCATaGTGGAATCCGTTCCGCCCA +
Preference number: 4 (lower is better)
Translates to: SGSRCPAPKRWVWCLGHGGGRRP*WNPFRP
Trigger: TGGGCGGAACGGATTCCAGCATGGACGTCTTCCACC...CCCATGCCCCAGGCACCACACCCATCTCTTGGGGGCTGGGCACCTGCTACCCGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp GAAGGTGGCCGTGGCAAGGGAGGAGCTGCTCCCATGGCAGAGCATTCCTGCAGACAGGACAGGCGCAGATaGGGCCCTCAAAGGACCGGC +
Preference number: 4 (lower is better)
Translates to: EGGRGKGGAAPMAEHSCRQDRRR*GPQRTG
Trigger: GCCGGTCCTTTGAGGGCCGCATCTGCGCCTGTCCTG...TCTGCAGGAATGCTCTGCCATGGGAGCAGCTCCTCCCTTGCCACGGCCACCTTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp CCTGCACTCTGGGTGGTGTCTCGGCTTGCGTGGGTGAGGGCTCCCATTGGCCCAGTGTCCTCGTCTCCATaGCGCCGCTTCTTCACACCG +
Preference number: 4 (lower is better)
Translates to: PALWVVSRLAWVRAPIGPVSSSP*RRFFTP
Trigger: CGGTGTGAAGAAGCGGCGGCATGGAGACGAGGACAC...TGGGCCAATGGGAGCCCTCACCCACGCAAGCCGAGACACCACCCAGAGTGCAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp TCGTGGCCCTGCTTCAGGTCCTGCAGGCCCCGCCAGATGGTCATGCGGTACTGCGTGTCCTCGTCTCCATaGCGCCGCTTCTTCACACCG +
Preference number: 4 (lower is better)
Translates to: SWPCFRSCRPRQMVMRYCVSSSP*RRFFTP
Trigger: CGGTGTGAAGAAGCGGCGGCATGGAGACGAGGACAC...GCAGTACCGCATGACCATCTGGCGGGGCCTGCAGGACCTGAAGCAGGGCCACGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR GCA 90 bp GGGCAGGAAGGAGGCGGTCCTGCAGAATACAGCGTGCTGGGGGCAGAGGCCAGTGTGTCCTCGTCTCCATaGCGCCGCTTCTTCACACCG +
Preference number: 4 (lower is better)
Translates to: GQEGGGPAEYSVLGAEASVSSSP*RRFFTP
Trigger: CGGTGTGAAGAAGCGGCGGCATGGAGACGAGGACAC...ACTGGCCTCTGCCCCCAGCACGCTGTATTCTGCAGGACCGCCTCCTTCCTGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp GGGTGTCAGGATGGGCCCCCGCGGCTCCTGAAGTGGAACATGGGGGAAGAGTGGGTGTCCTCGTCTCCATaGCGCCGCTTCTTCACACCG +
Preference number: 4 (lower is better)
Translates to: GCQDGPPRLLKWNMGEEWVSSSP*RRFFTP
Trigger: CGGTGTGAAGAAGCGGCGGCATGGAGACGAGGACAC...CCACTCTTCCCCCATGTTCCACTTCAGGAGCCGCGGGGGCCCATCCTGACACCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp TGCAGTTCCCCTGAGCCGCCGATGGAGATGGTGGCCGCGTTGCTAGAGCGGAGCGAGTCCACCAGTGGCTaGGGCACCAACTCCATCAGC +
Preference number: 4 (lower is better)
Translates to: CSSPEPPMEMVAALLERSESTSG*GTNSIS
Trigger: GCTGATGGAGTTGGTGCCGCAGCCACTGGTGGACTC...GCTCCGCTCTAGCAACGCGGCCACCATCTCCATCGGCGGCTCAGGGGAACTGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR GCA 90 bp GCTCCGGTTCCCTGCCCTGAAGCTGTGCTCCGGGACGGTCAAGGTTCGGCCACCATGGTCATGCGGTACTaGTCGGGGATCTTCAGGGCC +
Preference number: 4 (lower is better)
Translates to: APVPCPEAVLRDGQGSATMVMRY*SGIFRA
Trigger: GGCCCTGAAGATCCCCGAGCAGTACCGCATGACCAT...GGTGGCCGAACCTTGACCGTCCCGGAGCACAGCTTCAGGGCAGGGAACCGGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp TCGGGTAGCAGGTGCCCAGCCCCCAAGAGATGGGTGTGGTGCCTGGGGCATGGGATGGTCATGCGGTACTaGTCGGGGATCTTCAGGGCC +
Preference number: 4 (lower is better)
Translates to: SGSRCPAPKRWVWCLGHGMVMRY*SGIFRA
Trigger: GGCCCTGAAGATCCCCGAGCAGTACCGCATGACCAT...CCCATGCCCCAGGCACCACACCCATCTCTTGGGGGCTGGGCACCTGCTACCCGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp GCGGTTGGGGATGGTGATGGTGTGGCGCACGCGGAAGTGCACGGCCTCCATGACCCCGCCAGATGGTCATaGGGTACTGCTCGGGGATCT +
Preference number: 4 (lower is better)
Translates to: AVGDGDGVAHAEVHGLHDPARWS*GTARGS
Trigger: AGATCCCCGAGCAGTACCGCATGACCATCTGGCGGG...GTCATGGAGGCCGTGCACTTCCGCGTGCGCCACACCATCACCATCCCCAACCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR GCA 90 bp GTGCTCCGGGACGGTCAAGGTTCGGCCACCAAGGCTCAGGCTGCTCCTCGTGGACCCGCCAGATGGTCATaGGGTACTGCTCGGGGATCT +
Preference number: 4 (lower is better)
Translates to: VLRDGQGSATKAQAAPRGPARWS*GTARGS
Trigger: AGATCCCCGAGCAGTACCGCATGACCATCTGGCGGG...TCCACGAGGAGCAGCCTGAGCCTTGGTGGCCGAACCTTGACCGTCCCGGAGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp GGGTGTCAGGATGGGCCCCCGCGGCTCCTGAAGTGGAACATGGGGGAAGAGTGGCCCGCCAGATGGTCATaGGGTACTGCTCGGGGATCT +
Preference number: 4 (lower is better)
Translates to: GCQDGPPRLLKWNMGEEWPARWS*GTARGS
Trigger: AGATCCCCGAGCAGTACCGCATGACCATCTGGCGGG...CCACTCTTCCCCCATGTTCCACTTCAGGAGCCGCGGGGGCCCATCCTGACACCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp GAAGGTGGCCGTGGCAAGGGAGGAGCTGCTCCCATGGCAGAGCATTCCTGCAGAGCAGCTGCTGCGCGGTaGTGTAGTCGTGGCCCTGCT +
Preference number: 4 (lower is better)
Translates to: EGGRGKGGAAPMAEHSCRAAAAR*CSRGPA
Trigger: AGCAGGGCCACGACTACAGCACCGCGCAGCAGCTGC...TCTGCAGGAATGCTCTGCCATGGGAGCAGCTCCTCCCTTGCCACGGCCACCTTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp GGACGGTGGGAGAGGGATGCCTGCGTCTTCGTAGACCAGGTACCTGCGGCAACAGCTGCTTGCGGGCCTTaGAGTCGGGCAGGTCGAAGC +
Preference number: 4 (lower is better)
Translates to: GRWERDACVFVDQVPAATAACGP*SRAGRS
Trigger: GCTTCGACCTGCCCGACTGCAAGGCCCGCAAGCAGC...TGTTGCCGCAGGTACCTGGTCTACGAAGACGCAGGCATCCCTCTCCCACCGTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp GCGGTTGGGGATGGTGATGGTGTGGCGCACGCGGAAGTGCACGGCCTCCATGACTCCTCCTTGATGGGCTaGTTGCGGGCCTTGCAGTCG +
Preference number: 4 (lower is better)
Translates to: AVGDGDGVAHAEVHGLHDSSLMG*LRALQS
Trigger: CGACTGCAAGGCCCGCAAGCAGCCCATCAAGGAGGA...GTCATGGAGGCCGTGCACTTCCGCGTGCGCCACACCATCACCATCCCCAACCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR GCA 90 bp GGCAGGAAGGAGGCGGTCCTGCAGAATACAGCGTGCTGGGGGCAGAGGCCAGTCTCCTCCTTGATGGGCTaGTTGCGGGCCTTGCAGTCG +
Preference number: 4 (lower is better)
Translates to: GRKEAVLQNTACWGQRPVSSLMG*LRALQS
Trigger: CGACTGCAAGGCCCGCAAGCAGCCCATCAAGGAGGA...GACTGGCCTCTGCCCCCAGCACGCTGTATTCTGCAGGACCGCCTCCTTCCTGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp CTTCAGGAGGTGGCCTCGGGTAGCAGGTGCCCAGCCCCCAAGAGATGGGTGTGGTCCTCCTTGATGGGCTaGTTGCGGGCCTTGCAGTCG +
Preference number: 4 (lower is better)
Translates to: LQEVASGSRCPAPKRWVWSSLMG*LRALQS
Trigger: CGACTGCAAGGCCCGCAAGCAGCCCATCAAGGAGGA...CCACACCCATCTCTTGGGGGCTGGGCACCTGCTACCCGAGGCCACCTCCTGAAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp GGGTGTCAGGATGGGCCCCCGCGGCTCCTGAAGTGGAACATGGGGGAAGAGTGGCTGCAGAATACAGCGTaGTGGGGGCAGAGGCCAGTC +
Preference number: 4 (lower is better)
Translates to: GCQDGPPRLLKWNMGEEWLQNTA*WGQRPV
Trigger: GACTGGCCTCTGCCCCCAGCACGCTGTATTCTGCAG...CCACTCTTCCCCCATGTTCCACTTCAGGAGCCGCGGGGGCCCATCCTGACACCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp CCTGCACTCTGGGTGGTGTCTCGGCTTGCGTGGGTGAGGGCTCCCATTGGCCCAGGAAGGAGGCGGTCCTaGAGAATACAGCGTGCTGGG +
Preference number: 4 (lower is better)
Translates to: PALWVVSRLAWVRAPIGPGRRRS*RIQRAG
Trigger: CCCAGCACGCTGTATTCTGCAGGACCGCCTCCTTCC...TGGGCCAATGGGAGCCCTCACCCACGCAAGCCGAGACACCACCCAGAGTGCAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp CTTCAGGAGGTGGCCTCGGGTAGCAGGTGCCCAGCCCCCAAGAGATGGGTGTGGCACCAAGGCTCAGGCTaGTCCTCGTGGATGGAGGTG +
Preference number: 4 (lower is better)
Translates to: LQEVASGSRCPAPKRWVWHQGSG*SSWMEV
Trigger: CACCTCCATCCACGAGGAGCAGCCTGAGCCTTGGTG...CCACACCCATCTCTTGGGGGCTGGGCACCTGCTACCCGAGGCCACCTCCTGAAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp GTGCTCCGGGACGGTCAAGGTTCGGCCACCAAGGCTCAGGCTGCTCCTCGTGGACCTGCCCTGAAGCTGTaGTCCGGGACGGTCAAGGTT +
Preference number: 4 (lower is better)
Translates to: VLRDGQGSATKAQAAPRGPALKL*SGTVKV
Trigger: AACCTTGACCGTCCCGGAGCACAGCTTCAGGGCAGG...TCCACGAGGAGCAGCCTGAGCCTTGGTGGCCGAACCTTGACCGTCCCGGAGCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp TCAACAAGCCCTCTGGAACTGAAGCACATCTGCGCTGGGCTGAGGAACCCCGGGGGGGCTCCGGTTCCCTaGCCTGAAGCTGTGCTCCGG +
Preference number: 4 (lower is better)
Translates to: STSPLELKHICAGLRNPGGAPVP*PEAVLR
Trigger: CCGGAGCACAGCTTCAGGGCAGGGAACCGGAGCCCC...CCCGGGGTTCCTCAGCCCAGCGCAGATGTGCTTCAGTTCCAGAGGGCTTGTTGA
64% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp GGCCACCAAGGCTCAGGCTGCTCCTCGTGGATGGAGGTGGCCCCAGAAAGGGCCATTGGCCCACCTGCCTaGAATGAAGGGCCTCGTCAC +
Preference number: 4 (lower is better)
Translates to: GHQGSGCSSWMEVAPERAIGPPA*NEGPRH
Trigger: GTGACGAGGCCCTTCATTGCAGGCAGGTGGGCCAAT...GGCCCTTTCTGGGGCCACCTCCATCCACGAGGAGCAGCCTGAGCCTTGGTGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp GTGTCAGGATGGGCCCCCGCGGCTCCTGAAGTGGAACATGGGGGAAGAGTGGGGCGTAGACCAGGTACCTaGGGCAACACCAGTCGCTGC +
Preference number: 4 (lower is better)
Translates to: VSGWAPAAPEVEHGGRVGRRPGT*GNTSRC
Trigger: GCAGCGACTGGTGTTGCCGCAGGTACCTGGTCTACG...CCCCACTCTTCCCCCATGTTCCACTTCAGGAGCCGCGGGGGCCCATCCTGACAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp GGGCAGGAAGGAGGCGGTCCTGCAGAATACAGCGTGCTGGGGGCAGAGGCCAGTCGTAGACCAGGTACCTaGGGCAACACCAGTCGCTGC +
Preference number: 4 (lower is better)
Translates to: GQEGGGPAEYSVLGAEASRRPGT*GNTSRC
Trigger: GCAGCGACTGGTGTTGCCGCAGGTACCTGGTCTACG...ACTGGCCTCTGCCCCCAGCACGCTGTATTCTGCAGGACCGCCTCCTTCCTGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp GGGATGGGCCGGACCTTGCCTTTCCCCGGGCACAGCCCGAAGGTCCTGCCTCCTTGGGAGAGGGATGCCTaGGTCTTCGTAGACCAGGTA +
Preference number: 4 (lower is better)
Translates to: GMGRTLPFPGHSPKVLPPWERDA*VFVDQV
Trigger: TACCTGGTCTACGAAGACGCAGGCATCCCTCTCCCA...AGGAGGCAGGACCTTCGGGCTGTGCCCGGGGAAAGGCAAGGTCCGGCCCATCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp GGCCACCAAGGCTCAGGCTGCTCCTCGTGGATGGAGGTGGCCCCAGAAAGGGCCACGGTGGGAGAGGGATaGCTGCGTCTTCGTAGACCA +
Preference number: 4 (lower is better)
Translates to: GHQGSGCSSWMEVAPERATVGEG*LRLRRP
Trigger: TGGTCTACGAAGACGCAGGCATCCCTCTCCCACCGT...GGCCCTTTCTGGGGCCACCTCCATCCACGAGGAGCAGCCTGAGCCTTGGTGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp TCGGGTAGCAGGTGCCCAGCCCCCAAGAGATGGGTGTGGTGCCTGGGGCATGGGGAACTGAAGCACATCTaGGCTGGGCTGAGGAACCCC +
Preference number: 4 (lower is better)
Translates to: SGSRCPAPKRWVWCLGHGELKHI*AGLRNP
Trigger: GGGGTTCCTCAGCCCAGCGCAGATGTGCTTCAGTTC...CCCATGCCCCAGGCACCACACCCATCTCTTGGGGGCTGGGCACCTGCTACCCGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp CTTGGGTCTCTGGGCGGTGGCGCAGGCTGCAGCCAGGCGAGGCCCTCAGTGGATAGGGCAGCTTGTTCATaGCCCCGTGCACCTTGTTCA +
Preference number: 4 (lower is better)
Translates to: LGSLGGGAGCSQARPSVDRAACS*PRAPCS
Trigger: TGAACAAGGTGCACGGGGGCATGAACAAGCTGCCCT...ATCCACTGAGGGCCTCGCCTGGCTGCAGCCTGCGCCACCGCCCAGAGACCCAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354437.8
ENST00000378285.5
CDS-3UTR GCA 90 bp ACGCGGAAGTGCACGGCCTCCATGACCCGCTGGCGCTGCAGTTCCCCTGAGCCGAGGGCAGCTTGTTCATaGCCCCGTGCACCTTGTTCA +
Preference number: 4 (lower is better)
Translates to: TRKCTASMTRWRCSSPEPRAACS*PRAPCS
Trigger: TGAACAAGGTGCACGGGGGCATGAACAAGCTGCCCT...CGGCTCAGGGGAACTGCAGCGCCAGCGGGTCATGGAGGCCGTGCACTTCCGCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354437.8
ENST00000378285.5
CDS-3UTR GCA 90 bp GCCGCCGATGGAGATGGTGGCCGCGTTGCTAGAGCGGAGCAGCTGCTGCGCGGTGGATGCTGGGGAACATaGGGGCCGTTTGTTGGCATT +
Preference number: 4 (lower is better)
Translates to: AADGDGGRVARAEQLLRGGCWGT*GPFVGI
Trigger: AATGCCAACAAACGGCCCGCATGTTCCCCAGCATCC...ACCGCGCAGCAGCTGCTCCGCTCTAGCAACGCGGCCACCATCTCCATCGGCGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378280.5
ENST00000378285.5
CDS-3UTR GCA 90 bp TCAACAAGCCCTCTGGAACTGAAGCACATCTGCGCTGGGCTGAGGAACCCCGGGCGTGGCGAGGTGCCGTaGGGGGTCACCGACGTACAG +
Preference number: 4 (lower is better)
Translates to: STSPLELKHICAGLRNPGRGEVP*GVTDVQ
Trigger: CTGTACGTCGGTGACCCCGCACGGCACCTCGCCACG...CCCGGGGTTCCTCAGCCCAGCGCAGATGTGCTTCAGTTCCAGAGGGCTTGTTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378288.8
CDS-3UTR CCA 90 bp CCTGCACTCTGGGTGGTGTCTCGGCTTGCGTGGGTGAGGGCTCCCATTGGCCCAAGAGGTGCTCAAACGTaGTGCCCCCATCAGGGGAGG +
Preference number: 4 (lower is better)
Translates to: PALWVVSRLAWVRAPIGPRGAQT*CPHQGR
Trigger: CCTCCCCTGATGGGGGCACCACGTTTGAGCACCTCT...TGGGCCAATGGGAGCCCTCACCCACGCAAGCCGAGACACCACCCAGAGTGCAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp GGCAGGAAGGAGGCGGTCCTGCAGAATACAGCGTGCTGGGGGCAGAGGCCAGTCAGAGGTGCTCAAACGTaGTGCCCCCATCAGGGGAGG +
Preference number: 4 (lower is better)
Translates to: GRKEAVLQNTACWGQRPVRGAQT*CPHQGR
Trigger: CCTCCCCTGATGGGGGCACCACGTTTGAGCACCTCT...GACTGGCCTCTGCCCCCAGCACGCTGTATTCTGCAGGACCGCCTCCTTCCTGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp CAAGCGTGCACCCAGGCGACTGTGCTGTCAGCGGCCCCCGGGGAGGTGGACGGTGAAGTAGGTGCTGTCTaGTTCCAGAGAGCTCCAGAG +
Preference number: 4 (lower is better)
Translates to: QACTQATVLSAAPGEVDGEVGAV*FQRAPE
Trigger: CTCTGGAGCTCTCTGGAACCAGACAGCACCTACTTC...ACCGTCCACCTCCCCGGGGGCCGCTGACAGCACAGTCGCCTGGGTGCACGCTTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp GGGATGGGCCGGACCTTGCCTTTCCCCGGGCACAGCCCGAAGGTCCTGCCTCCTGTCATGCCCTCCAGGTaGAAGACGTCCATGCTGGAA +
Preference number: 4 (lower is better)
Translates to: GMGRTLPFPGHSPKVLPPVMPSR*KTSMLE
Trigger: TTCCAGCATGGACGTCTTCCACCTGGAGGGCATGAC...AGGAGGCAGGACCTTCGGGCTGTGCCCGGGGAAAGGCAAGGTCCGGCCCATCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000354437.8
ENST00000357733.7
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp GGTGCTGTAGTCGTGGCCCTGCTTCAGGTCCTGCAGGCCCCGCCAGATGGTCATGCGCGGCTGCTCATCTaGTCCATGGTGCTGCTCAGC +
Preference number: 4 (lower is better)
Translates to: GAVVVALLQVLQAPPDGHARLLI*SMVLLS
Trigger: GCTGAGCAGCACCATGGACCAGATGAGCAGCCGCGC...ATGACCATCTGGCGGGGCCTGCAGGACCTGAAGCAGGGCCACGACTACAGCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR CCA 90 bp GGACCTTGCCTTTCCCCGGGCACAGCCCGAAGGTCCTGCCTCCTGAGGCAGTTTGCGCGGCTGCTCATCTaGTCCATGGTGCTGCTCAGC +
Preference number: 4 (lower is better)
Translates to: GPCLSPGTARRSCLLRQFARLLI*SMVLLS
Trigger: GCTGAGCAGCACCATGGACCAGATGAGCAGCCGCGC...AAACTGCCTCAGGAGGCAGGACCTTCGGGCTGTGCCCGGGGAAAGGCAAGGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000346387.8
ENST00000354437.8
ENST00000357733.7
ENST00000378280.5
ENST00000378285.5
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp ATGGCAATAAGATGGAGAGCTGAGGTGACATGCAGCTGGGGTGGCTGCGCCACCGCTGGCGGCGTGCTCTaGGGTGTAGGGGCTGGCCGA +
Preference number: 4 (lower is better)
Translates to: MAIRWRAEVTCSWGGCATAGGVL*GVGAGR
Trigger: TCGGCCAGCCCCTACACCCCAGAGCACGCCGCCAGC...GGTGGCGCAGCCACCCCAGCTGCATGTCACCTCAGCTCTCCATCTTATTGCCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp CCTGCTTCAGGTCCTGCAGGCCCCGCCAGATGGTCATGCGGTACTGCTCGGGGATCCAGGTGGCTGACTTaGCCGTGCTGGACTGCTGGA +
Preference number: 4 (lower is better)
Translates to: PASGPAGPARWSCGTARGSRWLT*PCWTAG
Trigger: TCCAGCAGTCCAGCACGGCCAAGTCAGCCACCTGGA...TCCCCGAGCAGTACCGCATGACCATCTGGCGGGGCCTGCAGGACCTGAAGCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR CCA 90 bp GTGTCAGGATGGGCCCCCGCGGCTCCTGAAGTGGAACATGGGGGAAGAGTGGGGTCCAGGTGGCTGACTTaGCCGTGCTGGACTGCTGGA +
Preference number: 4 (lower is better)
Translates to: VSGWAPAAPEVEHGGRVGSRWLT*PCWTAG
Trigger: TCCAGCAGTCCAGCACGGCCAAGTCAGCCACCTGGA...CCCCACTCTTCCCCCATGTTCCACTTCAGGAGCCGCGGGGGCCCATCCTGACAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp TTTCACAGCTGCTTCTCCAGTGCAAGGAGGCTGCATGGGCTCCCTAGACAGGTGCAGGCATGGCCCGGATaGCGGTGCCTGGGGGTGGCG +
Preference number: 4 (lower is better)
Translates to: FHSCFSSARRLHGLPRQVQAWPG*RCLGVA
Trigger: CGCCACCCCCAGGCACCGCCATCCGGGCCATGCCTG...CACCTGTCTAGGGAGCCCATGCAGCCTCCTTGCACTGGAGAAGCAGCTGTGAAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp ATGGTGATGGTGTGGCGCACGCGGAAGTGCACGGCCTCCATGACCCGCTGGCGCTCTTGTAAACAGGCATaGCCCGGATGGCGGTGCCTG +
Preference number: 4 (lower is better)
Translates to: MVMVWRTRKCTASMTRWRSCKQA*PGWRCL
Trigger: CAGGCACCGCCATCCGGGCCATGCCTGTTTACAAGA...GCGCCAGCGGGTCATGGAGGCCGTGCACTTCCGCGTGCGCCACACCATCACCAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR CCA 90 bp GGGCAGGAAGGAGGCGGTCCTGCAGAATACAGCGTGCTGGGGGCAGAGGCCAGTTCCCGAGCTCGTGGTTaGGGCAGCGTTTCACGACGT +
Preference number: 4 (lower is better)
Translates to: GQEGGGPAEYSVLGAEASSRARG*GSVSRR
Trigger: ACGTCGTGAAACGCTGCCCCAACCACGAGCTCGGGA...ACTGGCCTCTGCCCCCAGCACGCTGTATTCTGCAGGACCGCCTCCTTCCTGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp GTAGTCGTGGCCCTGCTTCAGGTCCTGCAGGCCCCGCCAGATGGTCATGCGGTATCCCTCCCGAGCTCGTaGTTGGGGCAGCGTTTCACG +
Preference number: 4 (lower is better)
Translates to: VVVALLQVLQAPPDGHAVSLPSS*LGQRFT
Trigger: CGTGAAACGCTGCCCCAACCACGAGCTCGGGAGGGA...TACCGCATGACCATCTGGCGGGGCCTGCAGGACCTGAAGCAGGGCCACGACTAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR CCA 90 bp GGCCTGGTGGGAACGCTGGGGGAATGGGGGAGAGTCGCTGTTTCTGACCAGAGCTCCCTCCCGAGCTCGTaGTTGGGGCAGCGTTTCACG +
Preference number: 4 (lower is better)
Translates to: GLVGTLGEWGRVAVSDQSSLPSS*LGQRFT
Trigger: CGTGAAACGCTGCCCCAACCACGAGCTCGGGAGGGA...GCTCTGGTCAGAAACAGCGACTCTCCCCCATTCCCCCAGCGTTCCCACCAGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp GGGATGGGCCGGACCTTGCCTTTCCCCGGGCACAGCCCGAAGGTCCTGCCTCCTGATGAGGTGGCTGGCTaGAGCAGACTGTCCTTCGTT +
Preference number: 4 (lower is better)
Translates to: GMGRTLPFPGHSPKVLPPDEVAG*SRLSFV
Trigger: AACGAAGGACAGTCTGCTCCAGCCAGCCACCTCATC...AGGAGGCAGGACCTTCGGGCTGTGCCCGGGGAAAGGCAAGGTCCGGCCCATCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000346387.8
ENST00000354437.8
ENST00000357733.7
ENST00000378280.5
ENST00000378285.5
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp CAGCTGCTGCGCGGTGCTGTAGTCGTGGCCCTGCTTCAGGTCCTGCAGGCCCCGGATGAGGTGGCTGGCTaGAGCAGACTGTCCTTCGTT +
Preference number: 4 (lower is better)
Translates to: QLLRGAVVVALLQVLQAPDEVAG*SRLSFV
Trigger: AACGAAGGACAGTCTGCTCCAGCCAGCCACCTCATC...CGGGGCCTGCAGGACCTGAAGCAGGGCCACGACTACAGCACCGCGCAGCAGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR CCA 90 bp GTGTCAGGATGGGCCCCCGCGGCTCCTGAAGTGGAACATGGGGGAAGAGTGGGGTTCCGTCCCCACCTGTaGTGGCTCATAGGGCACCAC +
Preference number: 4 (lower is better)
Translates to: VSGWAPAAPEVEHGGRVGFRPHL*WLIGHH
Trigger: GTGGTGCCCTATGAGCCACCACAGGTGGGGACGGAA...CCCCACTCTTCCCCCATGTTCCACTTCAGGAGCCGCGGGGGCCCATCCTGACAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp TGCAGTTCCCCTGAGCCGCCGATGGAGATGGTGGCCGCGTTGCTAGAGCGGAGCTTCCGTCCCCACCTGTaGTGGCTCATAGGGCACCAC +
Preference number: 4 (lower is better)
Translates to: CSSPEPPMEMVAALLERSFRPHL*WLIGHH
Trigger: GTGGTGCCCTATGAGCCACCACAGGTGGGGACGGAA...GCTCCGCTCTAGCAACGCGGCCACCATCTCCATCGGCGGCTCAGGGGAACTGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR CCA 90 bp GTGCTCCGGGACGGTCAAGGTTCGGCCACCAAGGCTCAGGCTGCTCCTCGTGGATTCCGTCCCCACCTGTaGTGGCTCATAGGGCACCAC +
Preference number: 4 (lower is better)
Translates to: VLRDGQGSATKAQAAPRGFRPHL*WLIGHH
Trigger: GTGGTGCCCTATGAGCCACCACAGGTGGGGACGGAA...TCCACGAGGAGCAGCCTGAGCCTTGGTGGCCGAACCTTGACCGTCCCGGAGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp GCCAGAGCTTCCTGCCCTTCAGCTGGAAGGAGCCGGAAGGAGCTGGAAGGAAGGTGGCGGCCCCGTTCTTaGCGGAGCTCTCGTTCAGGG +
Preference number: 4 (lower is better)
Translates to: ARASCPSAGRSRKELEGRWRPRS*RSSRSG
Trigger: CCCTGAACGAGAGCTCCGCCAAGAACGGGGCCGCCA...CCTTCCTTCCAGCTCCTTCCGGCTCCTTCCAGCTGAAGGGCAGGAAGCTCTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp GGCTGCTTGCGGGCCTTGCAGTCGGGCAGGTCGAAGCCGAAGTCCGCCCACTCGATAGGAGTCCACCAGTaGCTGCGGCACCAACTCCAT +
Preference number: 4 (lower is better)
Translates to: GCLRALQSGRSKPKSAHSIGVHQ*LRHQLH
Trigger: ATGGAGTTGGTGCCGCAGCCACTGGTGGACTCCTAT...CGAGTGGGCGGACTTCGGCTTCGACCTGCCCGACTGCAAGGCCCGCAAGCAGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR CCA 90 bp GGACGGTGGGAGAGGGATGCCTGCGTCTTCGTAGACCAGGTACCTGCGGCAACAGCAGGCCCCGCCAGATaGTCATGCGGTACTGCTCGG +
Preference number: 4 (lower is better)
Translates to: GRWERDACVFVDQVPAATAGPAR*SCGTAR
Trigger: CCGAGCAGTACCGCATGACCATCTGGCGGGGCCTGC...TGTTGCCGCAGGTACCTGGTCTACGAAGACGCAGGCATCCCTCTCCCACCGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp ACCTTGCCTTTCCCCGGGCACAGCCCGAAGGTCCTGCCTCCTGAGGCAGTTTTGGCAGGCCCCGCCAGATaGTCATGCGGTACTGCTCGG +
Preference number: 4 (lower is better)
Translates to: TLPFPGHSPKVLPPEAVLAGPAR*SCGTAR
Trigger: CCGAGCAGTACCGCATGACCATCTGGCGGGGCCTGC...CAAAACTGCCTCAGGAGGCAGGACCTTCGGGCTGTGCCCGGGGAAAGGCAAGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000346387.8
ENST00000354437.8
ENST00000357733.7
ENST00000378280.5
ENST00000378285.5
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp GCCCTTCCCAGGAGCACACTACAGGGGCTCTTGGGACAGCCTCACTGGACTCAGGCCTCCATGACCCGCTaGCGCTGCAGTTCCCCTGAG +
Preference number: 4 (lower is better)
Translates to: ALPRSTLQGLLGQPHWTQASMTR*RCSSPE
Trigger: CTCAGGGGAACTGCAGCGCCAGCGGGTCATGGAGGC...CTGAGTCCAGTGAGGCTGTCCCAAGAGCCCCTGTAGTGTGCTCCTGGGAAGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp TGTAGTCGTGGCCCTGCTTCAGGTCCTGCAGGCCCCGCCAGATGGTCATGCGGTGGGATGGTGATGGTGTaGCGCACGCGGAAGTGCACG +
Preference number: 4 (lower is better)
Translates to: CSRGPASGPAGPARWSCGGMVMV*RTRKCT
Trigger: CGTGCACTTCCGCGTGCGCCACACCATCACCATCCC...ACCGCATGACCATCTGGCGGGGCCTGCAGGACCTGAAGCAGGGCCACGACTACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR CCA 90 bp TGTAGTCGTGGCCCTGCTTCAGGTCCTGCAGGCCCCGCCAGATGGTCATGCGGTAGGCGAGGCCCTCAGTaGATCTCGGCCTCCGTGAAC +
Preference number: 4 (lower is better)
Translates to: CSRGPASGPAGPARWSCGRRGPQ*ISASVN
Trigger: GTTCACGGAGGCCGAGATCCACTGAGGGCCTCGCCT...ACCGCATGACCATCTGGCGGGGCCTGCAGGACCTGAAGCAGGGCCACGACTACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR CCA 90 bp GCCTTGCAGTCGGGCAGGTCGAAGCCGAAGTCCGCCCACTCGTCAGGGCCGCCGCTCCTGAGGCAGTTTTaGACACACAGGAAGGAGAGG +
Preference number: 4 (lower is better)
Translates to: ALQSGRSKPKSAHSSGPPLLRQF*THRKER
Trigger: CCTCTCCTTCCTGTGTGTCCAAAACTGCCTCAGGAG...CGGCGGCCCTGACGAGTGGGCGGACTTCGGCTTCGACCTGCCCGACTGCAAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR CCA 90 bp GGACCTTGCCTTTCCCCGGGCACAGCCCGAAGGTCCTGCCTCCTGAGGCAGTTTCAGGCTGAGGGGCACTaGCTGAGGCGGTACCACATG +
Preference number: 4 (lower is better)
Translates to: GPCLSPGTARRSCLLRQFQAEGH*LRRYHM
Trigger: CATGTGGTACCGCCTCAGCCAGTGCCCCTCAGCCTG...AAACTGCCTCAGGAGGCAGGACCTTCGGGCTGTGCCCGGGGAAAGGCAAGGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp GTGTGGCGCACGCGGAAGTGCACGGCCTCCATGACCCGCTGGCGCTGCAGTTCCGAGGAGCTGCTCCCATaGCAGAGCATTCCTGCAGAT +
Preference number: 4 (lower is better)
Translates to: VWRTRKCTASMTRWRCSSEELLP*QSIPAD
Trigger: ATCTGCAGGAATGCTCTGCCATGGGAGCAGCTCCTC...GGAACTGCAGCGCCAGCGGGTCATGGAGGCCGTGCACTTCCGCGTGCGCCACAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604074.5
CDS-3UTR CCA 90 bp GCTGTAGTCGTGGCCCTGCTTCAGGTCCTGCAGGCCCCGCCAGATGGTCATGCGGGCCTACTAACTCCCTaGGGTGCTCCACGAAGGCCT +
Preference number: 4 (lower is better)
Translates to: AVVVALLQVLQAPPDGHAGLLTP*GAPRRP
Trigger: AGGCCTTCGTGGAGCACCCCAGGGAGTTAGTAGGCC...CGCATGACCATCTGGCGGGGCCTGCAGGACCTGAAGCAGGGCCACGACTACAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000604074.5
CDS-3UTR CCA 90 bp CAGCTGGGGCCATCTGGCTGCTCCGTGTTCTGGCCGGCTTCCTTGGACATCTGGCCTCGTGGATGGAGGTaGCCCCAGAAAGGGCCTGTG +
Preference number: 4 (lower is better)
Translates to: QLGPSGCSVFWPASLDIWPRGWR*PQKGPV
Trigger: CACAGGCCCTTTCTGGGGCCACCTCCATCCACGAGG...CCAGATGTCCAAGGAAGCCGGCCAGAACACGGAGCAGCCAGATGGCCCCAGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp GTAGTCGTGGCCCTGCTTCAGGTCCTGCAGGCCCCGCCAGATGGTCATGCGGTACCTCGTGGATGGAGGTaGCCCCAGAAAGGGCCTGTG +
Preference number: 4 (lower is better)
Translates to: VVVALLQVLQAPPDGHAVPRGWR*PQKGPV
Trigger: CACAGGCCCTTTCTGGGGCCACCTCCATCCACGAGG...TACCGCATGACCATCTGGCGGGGCCTGCAGGACCTGAAGCAGGGCCACGACTAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000604074.5
CDS-3UTR CCA 90 bp CCTGCACTCTGGGTGGTGTCTCGGCTTGCGTGGGTGAGGGCTCCCATTGGCCCATCAGGCTGCTCCTCGTaGATGGAGGTGGCCCCAGAA +
Preference number: 4 (lower is better)
Translates to: PALWVVSRLAWVRAPIGPSGCSS*MEVAPE
Trigger: TTCTGGGGCCACCTCCATCCACGAGGAGCAGCCTGA...TGGGCCAATGGGAGCCCTCACCCACGCAAGCCGAGACACCACCCAGAGTGCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp AGCACACTACAGGGGCTCTTGGGACAGCCTCACTGGACTCAGGGTGGACAGGTAGCCAGGCCCTCGCCCTaGCTGCAGCCAGATCCCCTG +
Preference number: 4 (lower is better)
Translates to: STLQGLLGQPHWTQGGQVARPSP*LQPDPL
Trigger: CAGGGGATCTGGCTGCAGCCAGGGCGAGGGCCTGGC...TACCTGTCCACCCTGAGTCCAGTGAGGCTGTCCCAAGAGCCCCTGTAGTGTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp ACCTTGCCTTTCCCCGGGCACAGCCCGAAGGTCCTGCCTCCTGAGGCAGTTTTGGGAGCCGGAAGGAGCTaGAAGGAAGGGCCAGGCCCT +
Preference number: 4 (lower is better)
Translates to: TLPFPGHSPKVLPPEAVLGAGRS*KEGPGP
Trigger: AGGGCCTGGCCCTTCCTTCCAGCTCCTTCCGGCTCC...CAAAACTGCCTCAGGAGGCAGGACCTTCGGGCTGTGCCCGGGGAAAGGCAAGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp GAAGGTGGCCGTGGCAAGGGAGGAGCTGCTCCCATGGCAGAGCATTCCTGCAGAGGAGCCGGAAGGAGCTaGAAGGAAGGGCCAGGCCCT +
Preference number: 4 (lower is better)
Translates to: EGGRGKGGAAPMAEHSCRGAGRS*KEGPGP
Trigger: AGGGCCTGGCCCTTCCTTCCAGCTCCTTCCGGCTCC...TCTGCAGGAATGCTCTGCCATGGGAGCAGCTCCTCCCTTGCCACGGCCACCTTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp ACCTTGCCTTTCCCCGGGCACAGCCCGAAGGTCCTGCCTCCTGAGGCAGTTTTGGTGGCTGCGCCACCCTaGGAAAGCCCCGAGTCTGCT +
Preference number: 4 (lower is better)
Translates to: TLPFPGHSPKVLPPEAVLVAAPP*ESPESA
Trigger: AGCAGACTCGGGGCTTTCCCAGGGTGGCGCAGCCAC...CAAAACTGCCTCAGGAGGCAGGACCTTCGGGCTGTGCCCGGGGAAAGGCAAGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp GGCCTGGTGGGAACGCTGGGGGAATGGGGGAGAGTCGCTGTTTCTGACCAGAGCGAAGCACATCTGCGCTaGGCTGAGGAACCCCGGGTG +
Preference number: 4 (lower is better)
Translates to: GLVGTLGEWGRVAVSDQSEAHLR*AEEPRV
Trigger: CACCCGGGGTTCCTCAGCCCAGCGCAGATGTGCTTC...GCTCTGGTCAGAAACAGCGACTCTCCCCCATTCCCCCAGCGTTCCCACCAGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp GCTCCGGTTCCCTGCCCTGAAGCTGTGCTCCGGGACGGTCAAGGTTCGGCCACCCACTACAGGGGCTCTTaGGACAGCCTCACTGGACTC +
Preference number: 4 (lower is better)
Translates to: APVPCPEAVLRDGQGSATHYRGS*DSLTGL
Trigger: GAGTCCAGTGAGGCTGTCCCAAGAGCCCCTGTAGTG...GGTGGCCGAACCTTGACCGTCCCGGAGCACAGCTTCAGGGCAGGGAACCGGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp GCAGAGAGAGTCCCCAGCCCCCGGCGCGGGCAAGACGCAGTTAGGGACATTCCCCACTACAGGGGCTCTTaGGACAGCCTCACTGGACTC +
Preference number: 4 (lower is better)
Translates to: AERVPSPRRGQDAVRDIPHYRGS*DSLTGL
Trigger: GAGTCCAGTGAGGCTGTCCCAAGAGCCCCTGTAGTG...GGGAATGTCCCTAACTGCGTCTTGCCCGCGCCGGGGGCTGGGGACTCTCTCTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp GGGCAGGAAGGAGGCGGTCCTGCAGAATACAGCGTGCTGGGGGCAGAGGCCAGTGGCTGCTCCGTGTTCTaGCCGGCTTCCTTGGACATC +
Preference number: 4 (lower is better)
Translates to: GQEGGGPAEYSVLGAEASGCSVF*PASLDI
Trigger: GATGTCCAAGGAAGCCGGCCAGAACACGGAGCAGCC...ACTGGCCTCTGCCCCCAGCACGCTGTATTCTGCAGGACCGCCTCCTTCCTGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp GCCCTTCCCAGGAGCACACTACAGGGGCTCTTGGGACAGCCTCACTGGACTCAGGCAGCTGGGGCCATCTaGCTGCTCCGTGTTCTGGCC +
Preference number: 4 (lower is better)
Translates to: ALPRSTLQGLLGQPHWTQAAGAI*LLRVLA
Trigger: GGCCAGAACACGGAGCAGCCAGATGGCCCCAGCTGC...CTGAGTCCAGTGAGGCTGTCCCAAGAGCCCCTGTAGTGTGCTCCTGGGAAGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp GCTCCGGTTCCCTGCCCTGAAGCTGTGCTCCGGGACGGTCAAGGTTCGGCCACCGGAACGCTGGGGGAATaGGGGAGAGTCGCTGTTTCT +
Preference number: 4 (lower is better)
Translates to: APVPCPEAVLRDGQGSATGTLGE*GRVAVS
Trigger: AGAAACAGCGACTCTCCCCCATTCCCCCAGCGTTCC...GGTGGCCGAACCTTGACCGTCCCGGAGCACAGCTTCAGGGCAGGGAACCGGAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp GCCCTTCCCAGGAGCACACTACAGGGGCTCTTGGGACAGCCTCACTGGACTCAGTGCGGGTCGGGCTCCTaGGTACAGCAAGGGCTTCCC +
Preference number: 4 (lower is better)
Translates to: ALPRSTLQGLLGQPHWTQCGSGS*VQQGLP
Trigger: GGGAAGCCCTTGCTGTACCCAGGAGCCCGACCCGCA...CTGAGTCCAGTGAGGCTGTCCCAAGAGCCCCTGTAGTGTGCTCCTGGGAAGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp GGCTGCTTGCGGGCCTTGCAGTCGGGCAGGTCGAAGCCGAAGTCCGCCCACTCGTTGGCTGGCACTGCGTaGCCATGGTTGTTGAGCATC +
Preference number: 4 (lower is better)
Translates to: GCLRALQSGRSKPKSAHSLAGTA*PWLLSI
Trigger: GATGCTCAACAACCATGGCCACGCAGTGCCAGCCAA...CGAGTGGGCGGACTTCGGCTTCGACCTGCCCGACTGCAAGGCCCGCAAGCAGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
CDS-3UTR CCA 90 bp CAGCTGCTGCGCGGTGCTGTAGTCGTGGCCCTGCTTCAGGTCCTGCAGGCCCCGTTGGCTGGCACTGCGTaGCCATGGTTGTTGAGCATC +
Preference number: 4 (lower is better)
Translates to: QLLRGAVVVALLQVLQAPLAGTA*PWLLSI
Trigger: GATGCTCAACAACCATGGCCACGCAGTGCCAGCCAA...CGGGGCCTGCAGGACCTGAAGCAGGGCCACGACTACAGCACCGCGCAGCAGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
CDS-3UTR CCA 90 bp TGCAGTTCCCCTGAGCCGCCGATGGAGATGGTGGCCGCGTTGCTAGAGCGGAGCTGCTCATCTCGCCGTTaGCTGGCACTGCGTGGCCAT +
Preference number: 4 (lower is better)
Translates to: CSSPEPPMEMVAALLERSCSSRR*LALRGH
Trigger: ATGGCCACGCAGTGCCAGCCAACGGCGAGATGAGCA...GCTCCGCTCTAGCAACGCGGCCACCATCTCCATCGGCGGCTCAGGGGAACTGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
CDS-3UTR CCA 90 bp TCAGGGCCGCCGCCTGGGCCGCCGCGGTTGGGGATGGTGATGGTGTGGCGCACGATGCGGGCCGTTTGTTaGCATTTTCGCTTTTCCCAT +
Preference number: 4 (lower is better)
Translates to: SGPPPGPPRLGMVMVWRTMRAVC*HFRFSH
Trigger: ATGGGAAAAGCGAAAATGCCAACAAACGGCCCGCAT...CGTGCGCCACACCATCACCATCCCCAACCGCGGCGGCCCAGGCGGCGGCCCTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000378280.5
ENST00000378285.5
CDS-3UTR CCA 90 bp GTGTCAGGATGGGCCCCCGCGGCTCCTGAAGTGGAACATGGGGGAAGAGTGGGGGGAACTGGTGTCCCGTaGGACGAGGCATGGATCTGG +
Preference number: 4 (lower is better)
Translates to: VSGWAPAAPEVEHGGRVGGTGVP*DEAWIW
Trigger: CCAGATCCATGCCTCGTCCCACGGGACACCAGTTCC...CCCCACTCTTCCCCCATGTTCCACTTCAGGAGCCGCGGGGGCCCATCCTGACAC
64% GC, longest homopolymer 6 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000378288.8
CDS-3UTR CCA 90 bp GCCCTTCCCAGGAGCACACTACAGGGGCTCTTGGGACAGCCTCACTGGACTCAGCACACGCCAGGGAACTaGTGTCCCGTGGGACGAGGC +
Preference number: 4 (lower is better)
Translates to: ALPRSTLQGLLGQPHWTQHTPGN*CPVGRG
Trigger: GCCTCGTCCCACGGGACACCAGTTCCCTGGCGTGTG...CTGAGTCCAGTGAGGCTGTCCCAAGAGCCCCTGTAGTGTGCTCCTGGGAAGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378288.8
CDS-3UTR CCA 90 bp CCTGCACTCTGGGTGGTGTCTCGGCTTGCGTGGGTGAGGGCTCCCATTGGCCCACTCAGCAGATTGAACTaGGCCGTGGCGAGGTGCCGT +
Preference number: 4 (lower is better)
Translates to: PALWVVSRLAWVRAPIGPLSRLN*AVARCR
Trigger: ACGGCACCTCGCCACGGCCCAGTTCAATCTGCTGAG...TGGGCCAATGGGAGCCCTCACCCACGCAAGCCGAGACACCACCCAGAGTGCAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378288.8
3UTR CAA 72 bp CCCCCAGCCCTTCCCAGGAGCACACTACAGGGGCTCTaGGGACAGCCTCACTGGACTCAGGGTGGACAGGTA +
Preference number: 4 (lower is better)
Translates to: PPALPRSTLQGL*GQPHWTQGGQV
Trigger: TACCTGTCCACCCTGAGTCCAGTGAGGCTGTCCCAAGAGCCCCTGTAGTGTGCTCCTGGGAAGGGCTGGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR CAA 72 bp ATCTCGGCCTCCGTGAACTCCTCCTTGATGGGCTGCTaGCGGGCCTTGCAGTCGGGCAGGTCGAAGCCGAAG +
Preference number: 4 (lower is better)
Translates to: ISASVNSSLMGC*RALQSGRSKPK
Trigger: CTTCGGCTTCGACCTGCCCGACTGCAAGGCCCGCAAGCAGCCCATCAAGGAGGAGTTCACGGAGGCCGAGAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR TCA 90 bp GGGGATGGTGATGGTGTGGCGCACGCGGAAGTGCACGGCCTCCATGACCCGCTGTGGACTGCTGGAAAGTaGCCTCAAAGTGGTGGGGTC +
Preference number: 4 (lower is better)
Translates to: GDGDGVAHAEVHGLHDPLWTAGK*PQSGGV
Trigger: GACCCCACCACTTTGAGGTCACTTTCCAGCAGTCCA...CAGCGGGTCATGGAGGCCGTGCACTTCCGCGTGCGCCACACCATCACCATCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR TCA 90 bp GGCCTGGTGGGAACGCTGGGGGAATGGGGGAGAGTCGCTGTTTCTGACCAGAGCCGCTCTGCCTGCCGGTaGCAGGGTCATCCACATACT +
Preference number: 4 (lower is better)
Translates to: GLVGTLGEWGRVAVSDQSRSACR*QGHPHT
Trigger: AGTATGTGGATGACCCTGTCACCGGCAGGCAGAGCG...GCTCTGGTCAGAAACAGCGACTCTCCCCCATTCCCCCAGCGTTCCCACCAGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR TCA 90 bp GGGGATGGTGATGGTGTGGCGCACGCGGAAGTGCACGGCCTCCATGACCCGCTGTGTACAGGATGGTGGTaGATTCCGTCCCCACCTGTG +
Preference number: 4 (lower is better)
Translates to: GDGDGVAHAEVHGLHDPLCTGWW*IPSPPV
Trigger: CACAGGTGGGGACGGAATTCACCACCATCCTGTACA...CAGCGGGTCATGGAGGCCGTGCACTTCCGCGTGCGCCACACCATCACCATCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR TCA 90 bp AGCACACTACAGGGGCTCTTGGGACAGCCTCACTGGACTCAGGGTGGACAGGTACGCGGTTGGGGATGGTaGTGGTGTGGCGCACGCGGA +
Preference number: 4 (lower is better)
Translates to: STLQGLLGQPHWTQGGQVRGWGW*WCGARG
Trigger: TCCGCGTGCGCCACACCATCACCATCCCCAACCGCG...TACCTGTCCACCCTGAGTCCAGTGAGGCTGTCCCAAGAGCCCCTGTAGTGTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR TCA 90 bp GATGGGCTGCTTGCGGGCCTTGCAGTCGGGCAGGTCGAAGCCGAAGTCCGCCCAGAAGGTCCTGCCTCCTaGGGCAGTTTTGGACACACA +
Preference number: 4 (lower is better)
Translates to: DGLLAGLAVGQVEAEVRPEGPAS*GSFGHT
Trigger: TGTGTGTCCAAAACTGCCTCAGGAGGCAGGACCTTC...TGGGCGGACTTCGGCTTCGACCTGCCCGACTGCAAGGCCCGCAAGCAGCCCATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR TCA 90 bp CCCTGCTTCAGGTCCTGCAGGCCCCGCCAGATGGTCATGCGGTACTGCTCGGGGGAAGGTCCTGCCTCCTaGGGCAGTTTTGGACACACA +
Preference number: 4 (lower is better)
Translates to: PCFRSCRPRQMVMRYCSGEGPAS*GSFGHT
Trigger: TGTGTGTCCAAAACTGCCTCAGGAGGCAGGACCTTC...CCCCGAGCAGTACCGCATGACCATCTGGCGGGGCCTGCAGGACCTGAAGCAGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR TCA 90 bp CCTGCACTCTGGGTGGTGTCTCGGCTTGCGTGGGTGAGGGCTCCCATTGGCCCACCTCAGTCTGTTCCCTaGCTGCCACCGCCTAGAAAG +
Preference number: 4 (lower is better)
Translates to: PALWVVSRLAWVRAPIGPPQSVP*LPPPRK
Trigger: CTTTCTAGGCGGTGGCAGTCAGGGAACAGACTGAGG...TGGGCCAATGGGAGCCCTCACCCACGCAAGCCGAGACACCACCCAGAGTGCAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR TCA 90 bp GGCAGGAAGGAGGCGGTCCTGCAGAATACAGCGTGCTGGGGGCAGAGGCCAGTCCCTCAGTCTGTTCCCTaGCTGCCACCGCCTAGAAAG +
Preference number: 4 (lower is better)
Translates to: GRKEAVLQNTACWGQRPVPQSVP*LPPPRK
Trigger: CTTTCTAGGCGGTGGCAGTCAGGGAACAGACTGAGG...GACTGGCCTCTGCCCCCAGCACGCTGTATTCTGCAGGACCGCCTCCTTCCTGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR TCA 90 bp CAGAGCGACTTGGACAGATGTGAGCTGACCTGCCTGGCGAGCTCCTTCTGCCTTTCCGGTTCCCTGCCCTaGAGCTGTGCTCCGGGACGG +
Preference number: 4 (lower is better)
Translates to: QSDLDRCELTCLASSFCLSGSLP*SCAPGR
Trigger: CCGTCCCGGAGCACAGCTTCAGGGCAGGGAACCGGA...AAGGCAGAAGGAGCTCGCCAGGCAGGTCAGCTCACATCTGTCCAAGTCGCTCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR TCA 90 bp CTACAGGGGCTCTTGGGACAGCCTCACTGGACTCAGGGTGGACAGGTAACGTACTCCGGTTCCCTGCCCTaGAGCTGTGCTCCGGGACGG +
Preference number: 4 (lower is better)
Translates to: LQGLLGQPHWTQGGQVTYSGSLP*SCAPGR
Trigger: CCGTCCCGGAGCACAGCTTCAGGGCAGGGAACCGGA...GTACGTTACCTGTCCACCCTGAGTCCAGTGAGGCTGTCCCAAGAGCCCCTGTAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR TCA 90 bp ATGGCAATAAGATGGAGAGCTGAGGTGACATGCAGCTGGGGTGGCTGCGCCACCCTCGGCTTGCGTGGGTaGGGGCTCCCATTGGCCCAC +
Preference number: 4 (lower is better)
Translates to: MAIRWRAEVTCSWGGCATLGLRG*GLPLAH
Trigger: GTGGGCCAATGGGAGCCCTCACCCACGCAAGCCGAG...GGTGGCGCAGCCACCCCAGCTGCATGTCACCTCAGCTCTCCATCTTATTGCCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR TCA 90 bp CCTGCACTCTGGGTGGTGTCTCGGCTTGCGTGGGTGAGGGCTCCCATTGGCCCAAGCAAGATGGAGTCCTaGTCTGGGGATGGGGGCTGT +
Preference number: 4 (lower is better)
Translates to: PALWVVSRLAWVRAPIGPSKMES*SGDGGC
Trigger: ACAGCCCCCATCCCCAGATCAGGACTCCATCTTGCT...TGGGCCAATGGGAGCCCTCACCCACGCAAGCCGAGACACCACCCAGAGTGCAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR TCA 90 bp AGCACACTACAGGGGCTCTTGGGACAGCCTCACTGGACTCAGGGTGGACAGGTAGCTGCCGCTACTGACTaGTGCCCTGGGCGTGGGCAC +
Preference number: 4 (lower is better)
Translates to: STLQGLLGQPHWTQGGQVAAATD*CPGRGH
Trigger: GTGCCCACGCCCAGGGCATCAGTCAGTAGCGGCAGC...TACCTGTCCACCCTGAGTCCAGTGAGGCTGTCCCAAGAGCCCCTGTAGTGTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR TCA 90 bp GGCCTGGTGGGAACGCTGGGGGAATGGGGGAGAGTCGCTGTTTCTGACCAGAGCGATGGAGAGCTGAGGTaGCATGCAGCTGGGGTGGCT +
Preference number: 4 (lower is better)
Translates to: GLVGTLGEWGRVAVSDQSDGELR*HAAGVA
Trigger: AGCCACCCCAGCTGCATGTCACCTCAGCTCTCCATC...GCTCTGGTCAGAAACAGCGACTCTCCCCCATTCCCCCAGCGTTCCCACCAGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR TCA 90 bp GCTGCGCGGTGCTGTAGTCGTGGCCCTGCTTCAGGTCCTGCAGGCCCCGCCAGAAATAAGATGGAGAGCTaGGGTGACATGCAGCTGGGG +
Preference number: 4 (lower is better)
Translates to: AARCCSRGPASGPAGPARNKMES*GDMQLG
Trigger: CCCCAGCTGCATGTCACCTCAGCTCTCCATCTTATT...TCTGGCGGGGCCTGCAGGACCTGAAGCAGGGCCACGACTACAGCACCGCGCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000604074.5
CDS-3UTR TCA 90 bp GTGTCAGGATGGGCCCCCGCGGCTCCTGAAGTGGAACATGGGGGAAGAGTGGGGTCTGCCTTGCCTCTCTaGGCAGACTCAGGACCACTG +
Preference number: 4 (lower is better)
Translates to: VSGWAPAAPEVEHGGRVGSALPL*ADSGPL
Trigger: CAGTGGTCCTGAGTCTGCTCAGAGAGGCAAGGCAGA...CCCCACTCTTCCCCCATGTTCCACTTCAGGAGCCGCGGGGGCCCATCCTGACAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR TCA 90 bp GGCAGGAAGGAGGCGGTCCTGCAGAATACAGCGTGCTGGGGGCAGAGGCCAGTCTCTGCCTTGCCTCTCTaGGCAGACTCAGGACCACTG +
Preference number: 4 (lower is better)
Translates to: GRKEAVLQNTACWGQRPVSALPL*ADSGPL
Trigger: CAGTGGTCCTGAGTCTGCTCAGAGAGGCAAGGCAGA...GACTGGCCTCTGCCCCCAGCACGCTGTATTCTGCAGGACCGCCTCCTTCCTGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR TCA 90 bp CAGCTGGGGCCATCTGGCTGCTCCGTGTTCTGGCCGGCTTCCTTGGACATCTGGCGACTTGGACAGATGTaGGCTGACCTGCCTGGCGAG +
Preference number: 4 (lower is better)
Translates to: QLGPSGCSVFWPASLDIWRLGQM*ADLPGE
Trigger: CTCGCCAGGCAGGTCAGCTCACATCTGTCCAAGTCG...CCAGATGTCCAAGGAAGCCGGCCAGAACACGGAGCAGCCAGATGGCCCCAGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp CTTCAGGAGGTGGCCTCGGGTAGCAGGTGCCCAGCCCCCAAGAGATGGGTGTGGAGAGAGCTCCAGAGGTaGTCAAACGTGGTGCCCCCA +
Preference number: 4 (lower is better)
Translates to: LQEVASGSRCPAPKRWVWRELQR*SNVVPP
Trigger: TGGGGGCACCACGTTTGAGCACCTCTGGAGCTCTCT...CCACACCCATCTCTTGGGGGCTGGGCACCTGCTACCCGAGGCCACCTCCTGAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp ACGCGGAAGTGCACGGCCTCCATGACCCGCTGGCGCTGCAGTTCCCCTGAGCCGGAAGGTCGAAGTAGGTaGTGTCTGGTTCCAGAGAGC +
Preference number: 4 (lower is better)
Translates to: TRKCTASMTRWRCSSPEPEGRSR*CLVPES
Trigger: GCTCTCTGGAACCAGACAGCACCTACTTCGACCTTC...CGGCTCAGGGGAACTGCAGCGCCAGCGGGTCATGGAGGCCGTGCACTTCCGCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354437.8
ENST00000604074.5
CDS-3UTR GCA 90 bp CTCCCCACCCGGCCTTCCTGGGAACAAGTCCCGCCCACCTGGCTTCTCACTCAGGGTGGAAGACGTCCATaGTGGAATCCGTTCCGCCCA +
Preference number: 4 (lower is better)
Translates to: LPTRPSWEQVPPTWLLTQGGRRP*WNPFRP
Trigger: TGGGCGGAACGGATTCCAGCATGGACGTCTTCCACC...CTGAGTGAGAAGCCAGGTGGGCGGGACTTGTTCCCAGGAAGGCCGGGTGGGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp CTTGGGTCTCTGGGCGGTGGCGCAGGCTGCAGCCAGGCGAGGCCCTCAGTGGATTTGGCCGTGCTGGACTaGTGGAAAGTGACCTCAAAG +
Preference number: 4 (lower is better)
Translates to: LGSLGGGAGCSQARPSVDLAVLD*WKVTSK
Trigger: CTTTGAGGTCACTTTCCAGCAGTCCAGCACGGCCAA...ATCCACTGAGGGCCTCGCCTGGCTGCAGCCTGCGCCACCGCCCAGAGACCCAAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR GCA 90 bp GCCGCCGATGGAGATGGTGGCCGCGTTGCTAGAGCGGAGCAGCTGCTGCGCGGTTTGGCCGTGCTGGACTaGTGGAAAGTGACCTCAAAG +
Preference number: 4 (lower is better)
Translates to: AADGDGGRVARAEQLLRGLAVLD*WKVTSK
Trigger: CTTTGAGGTCACTTTCCAGCAGTCCAGCACGGCCAA...ACCGCGCAGCAGCTGCTCCGCTCTAGCAACGCGGCCACCATCTCCATCGGCGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR GCA 90 bp GATGGTGTGGCGCACGCGGAAGTGCACGGCCTCCATGACCCGCTGGCGCTGCAGTTGGCCGTGCTGGACTaGTGGAAAGTGACCTCAAAG +
Preference number: 4 (lower is better)
Translates to: DGVAHAEVHGLHDPLALQLAVLD*WKVTSK
Trigger: CTTTGAGGTCACTTTCCAGCAGTCCAGCACGGCCAA...CTGCAGCGCCAGCGGGTCATGGAGGCCGTGCACTTCCGCGTGCGCCACACCATC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR GCA 90 bp TCAACAAGCCCTCTGGAACTGAAGCACATCTGCGCTGGGCTGAGGAACCCCGGGGGCACCACGACGCTCTaGCTGCCGGTGACAGGGTCA +
Preference number: 4 (lower is better)
Translates to: STSPLELKHICAGLRNPGGTTTL*LPVTGS
Trigger: TGACCCTGTCACCGGCAGGCAGAGCGTCGTGGTGCC...CCCGGGGTTCCTCAGCCCAGCGCAGATGTGCTTCAGTTCCAGAGGGCTTGTTGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp GGACCTTGCCTTTCCCCGGGCACAGCCCGAAGGTCCTGCCTCCTGAGGCAGTTTGAGTCCACCAGTGGCTaGGGCACCAACTCCATCAGC +
Preference number: 4 (lower is better)
Translates to: GPCLSPGTARRSCLLRQFESTSG*GTNSIS
Trigger: GCTGATGGAGTTGGTGCCGCAGCCACTGGTGGACTC...AAACTGCCTCAGGAGGCAGGACCTTCGGGCTGTGCCCGGGGAAAGGCAAGGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000346387.8
ENST00000354437.8
ENST00000357733.7
ENST00000378280.5
ENST00000378285.5
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp TGCGCTGGGCTGAGGAACCCCGGGTGTCAGGATGGGCCCCCGCGGCTCCTGAAGTCTGCAGGTGGTAAATaGTCTGTAACCCTTGGGAGG +
Preference number: 4 (lower is better)
Translates to: CAGLRNPGCQDGPPRLLKSAGGK*SVTLGR
Trigger: CCTCCCAAGGGTTACAGAGCATTTACCACCTGCAGA...CTTCAGGAGCCGCGGGGGCCCATCCTGACACCCGGGGTTCCTCAGCCCAGCGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000346387.8
ENST00000378288.8
ENST00000378295.9
CDS-3UTR GCA 90 bp CTGGAAGTCGGAGCCGACGCTGCGGTCCCCACCCACGCCTGCCATGGAGCACGCTCTGCAGGTGGTAAATaGTCTGTAACCCTTGGGAGG +
Preference number: 4 (lower is better)
Translates to: LEVGADAAVPTHACHGARSAGGK*SVTLGR
Trigger: CCTCCCAAGGGTTACAGAGCATTTACCACCTGCAGA...GCGTGCTCCATGGCAGGCGTGGGTGGGGACCGCAGCGTCGGCTCCGACTTCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346387.8
ENST00000378288.8
ENST00000378295.9
CDS-3UTR GCA 90 bp GGGCAGGAAGGAGGCGGTCCTGCAGAATACAGCGTGCTGGGGGCAGAGGCCAGTATGGTCATGCGGTACTaGTCGGGGATCTTCAGGGCC +
Preference number: 4 (lower is better)
Translates to: GQEGGGPAEYSVLGAEASMVMRY*SGIFRA
Trigger: GGCCCTGAAGATCCCCGAGCAGTACCGCATGACCAT...ACTGGCCTCTGCCCCCAGCACGCTGTATTCTGCAGGACCGCCTCCTTCCTGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp CCTGCACTCTGGGTGGTGTCTCGGCTTGCGTGGGTGAGGGCTCCCATTGGCCCAATGGTCATGCGGTACTaGTCGGGGATCTTCAGGGCC +
Preference number: 4 (lower is better)
Translates to: PALWVVSRLAWVRAPIGPMVMRY*SGIFRA
Trigger: GGCCCTGAAGATCCCCGAGCAGTACCGCATGACCAT...TGGGCCAATGGGAGCCCTCACCCACGCAAGCCGAGACACCACCCAGAGTGCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp CAGCTGGGGCCATCTGGCTGCTCCGTGTTCTGGCCGGCTTCCTTGGACATCTGGCCCGCCAGATGGTCATaGGGTACTGCTCGGGGATCT +
Preference number: 4 (lower is better)
Translates to: QLGPSGCSVFWPASLDIWPARWS*GTARGS
Trigger: AGATCCCCGAGCAGTACCGCATGACCATCTGGCGGG...CCAGATGTCCAAGGAAGCCGGCCAGAACACGGAGCAGCCAGATGGCCCCAGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp GTAGTCGTGGCCCTGCTTCAGGTCCTGCAGGCCCCGCCAGATGGTCATGCGGTACCCGCCAGATGGTCATaGGGTACTGCTCGGGGATCT +
Preference number: 4 (lower is better)
Translates to: VVVALLQVLQAPPDGHAVPARWS*GTARGS
Trigger: AGATCCCCGAGCAGTACCGCATGACCATCTGGCGGG...TACCGCATGACCATCTGGCGGGGCCTGCAGGACCTGAAGCAGGGCCACGACTAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR GCA 90 bp AGCCAGGCGAGGCCCTCAGTGGATCTCGGCCTCCGTGAACTCCTCCTTGATGGGCCCGCCAGATGGTCATaGGGTACTGCTCGGGGATCT +
Preference number: 4 (lower is better)
Translates to: SQARPSVDLGLRELLLDGPARWS*GTARGS
Trigger: AGATCCCCGAGCAGTACCGCATGACCATCTGGCGGG...CCCATCAAGGAGGAGTTCACGGAGGCCGAGATCCACTGAGGGCCTCGCCTGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR GCA 90 bp ATGGCAATAAGATGGAGAGCTGAGGTGACATGCAGCTGGGGTGGCTGCGCCACCATGACCCGCTGGCGCTaGAGTTCCCCTGAGCCGCCG +
Preference number: 4 (lower is better)
Translates to: MAIRWRAEVTCSWGGCATMTRWR*SSPEPP
Trigger: CGGCGGCTCAGGGGAACTGCAGCGCCAGCGGGTCAT...GGTGGCGCAGCCACCCCAGCTGCATGTCACCTCAGCTCTCCATCTTATTGCCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp CCCCAAGAGATGGGTGTGGTGCCTGGGGCATGGGTCTTAGCCTTTCTGGTCTCATGGCGCACGCGGAAGTaGACGGCCTCCATGACCCGC +
Preference number: 4 (lower is better)
Translates to: PQEMGVVPGAWVLAFLVSWRTRK*TASMTR
Trigger: GCGGGTCATGGAGGCCGTGCACTTCCGCGTGCGCCA...TGAGACCAGAAAGGCTAAGACCCATGCCCCAGGCACCACACCCATCTCTTGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp GGTGCTGTAGTCGTGGCCCTGCTTCAGGTCCTGCAGGCCCCGCCAGATGGTCATTCCTCCTTGATGGGCTaGTTGCGGGCCTTGCAGTCG +
Preference number: 4 (lower is better)
Translates to: GAVVVALLQVLQAPPDGHSSLMG*LRALQS
Trigger: CGACTGCAAGGCCCGCAAGCAGCCCATCAAGGAGGA...ATGACCATCTGGCGGGGCCTGCAGGACCTGAAGCAGGGCCACGACTACAGCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR GCA 90 bp AGTTCCCCTGAGCCGCCGATGGAGATGGTGGCCGCGTTGCTAGAGCGGAGCAGCACAGCCCGAAGGTCCTaGCTCCTGAGGCAGTTTTGG +
Preference number: 4 (lower is better)
Translates to: SSPEPPMEMVAALLERSSTARRS*LLRQFW
Trigger: CCAAAACTGCCTCAGGAGGCAGGACCTTCGGGCTGT...GCTGCTCCGCTCTAGCAACGCGGCCACCATCTCCATCGGCGGCTCAGGGGAACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR GCA 90 bp GCGGTGGCGCAGGCTGCAGCCAGGCGAGGCCCTCAGTGGATCTCGGCCTCCGTGACACAGTCACTTGGCTaGTCACTACTATCCAGAACC +
Preference number: 4 (lower is better)
Translates to: AVAQAAARRGPQWISASVTQSLG*SLLSRT
Trigger: GGTTCTGGATAGTAGTGAGCAGCCAAGTGACTGTGT...CACGGAGGCCGAGATCCACTGAGGGCCTCGCCTGGCTGCAGCCTGCGCCACCGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604074.5
CDS-3UTR GCA 90 bp GTAGTCGTGGCCCTGCTTCAGGTCCTGCAGGCCCCGCCAGATGGTCATGCGGTAGGAAGGAGGCGGTCCTaGAGAATACAGCGTGCTGGG +
Preference number: 4 (lower is better)
Translates to: VVVALLQVLQAPPDGHAVGRRRS*RIQRAG
Trigger: CCCAGCACGCTGTATTCTGCAGGACCGCCTCCTTCC...TACCGCATGACCATCTGGCGGGGCCTGCAGGACCTGAAGCAGGGCCACGACTAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000604074.5
CDS-3UTR GCA 90 bp GGGATGGGCCGGACCTTGCCTTTCCCCGGGCACAGCCCGAAGGTCCTGCCTCCTAGATTTGCCTGGATTTaGCCTTCCTGGGGTTCCCTC +
Preference number: 4 (lower is better)
Translates to: GMGRTLPFPGHSPKVLPPRFAWI*PSWGSL
Trigger: GAGGGAACCCCAGGAAGGGCAAATCCAGGCAAATCT...AGGAGGCAGGACCTTCGGGCTGTGCCCGGGGAAAGGCAAGGTCCGGCCCATCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp GCCAGAGCTTCCTGCCCTTCAGCTGGAAGGAGCCGGAAGGAGCTGGAAGGAAGGCCCAGAAAGGGCCTGTaGAGACTCTGTCTCCCCGGG +
Preference number: 4 (lower is better)
Translates to: ARASCPSAGRSRKELEGRPRKGL*RLCLPG
Trigger: CCCGGGGAGACAGAGTCTGCACAGGCCCTTTCTGGG...CCTTCCTTCCAGCTCCTTCCGGCTCCTTCCAGCTGAAGGGCAGGAAGCTCTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp CAGAGCGACTTGGACAGATGTGAGCTGACCTGCCTGGCGAGCTCCTTCTGCCTTGGGGCTCCGGTTCCCTaGCCTGAAGCTGTGCTCCGG +
Preference number: 4 (lower is better)
Translates to: QSDLDRCELTCLASSFCLGAPVP*PEAVLR
Trigger: CCGGAGCACAGCTTCAGGGCAGGGAACCGGAGCCCC...AAGGCAGAAGGAGCTCGCCAGGCAGGTCAGCTCACATCTGTCCAAGTCGCTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp CTTCAGGAGGTGGCCTCGGGTAGCAGGTGCCCAGCCCCCAAGAGATGGGTGTGGATTGGCCCACCTGCCTaGAATGAAGGGCCTCGTCAC +
Preference number: 4 (lower is better)
Translates to: LQEVASGSRCPAPKRWVWIGPPA*NEGPRH
Trigger: GTGACGAGGCCCTTCATTGCAGGCAGGTGGGCCAAT...CCACACCCATCTCTTGGGGGCTGGGCACCTGCTACCCGAGGCCACCTCCTGAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp CACACTACAGGGGCTCTTGGGACAGCCTCACTGGACTCAGGGTGGACAGGTAACGTGTGGAGCTGGCCGTaGCAGAAGGGGCCAGGCAGC +
Preference number: 4 (lower is better)
Translates to: HTTGALGTASLDSGWTGNVWSWP*QKGPGS
Trigger: GCTGCCTGGCCCCTTCTGGCACGGCCAGCTCCACAC...GTTACCTGTCCACCCTGAGTCCAGTGAGGCTGTCCCAAGAGCCCCTGTAGTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp CCGCCGATGGAGATGGTGGCCGCGTTGCTAGAGCGGAGCAGCTGCTGCGCGGTGTGTCTAACCTTGCTGTaGCCTGAGGGGCTTAACTGC +
Preference number: 4 (lower is better)
Translates to: PPMEMVAALLERSSCCAVCLTLL*PEGLNC
Trigger: GCAGTTAAGCCCCTCAGGGCACAGCAAGGTTAGACA...CACCGCGCAGCAGCTGCTCCGCTCTAGCAACGCGGCCACCATCTCCATCGGCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000604074.5
CDS-3UTR GCA 90 bp GGACCTTGCCTTTCCCCGGGCACAGCCCGAAGGTCCTGCCTCCTGAGGCAGTTTCGTAGACCAGGTACCTaGGGCAACACCAGTCGCTGC +
Preference number: 4 (lower is better)
Translates to: GPCLSPGTARRSCLLRQFRRPGT*GNTSRC
Trigger: GCAGCGACTGGTGTTGCCGCAGGTACCTGGTCTACG...AAACTGCCTCAGGAGGCAGGACCTTCGGGCTGTGCCCGGGGAAAGGCAAGGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp CCTGCACTCTGGGTGGTGTCTCGGCTTGCGTGGGTGAGGGCTCCCATTGGCCCAACGGTGGGAGAGGGATaGCTGCGTCTTCGTAGACCA +
Preference number: 4 (lower is better)
Translates to: PALWVVSRLAWVRAPIGPTVGEG*LRLRRP
Trigger: TGGTCTACGAAGACGCAGGCATCCCTCTCCCACCGT...TGGGCCAATGGGAGCCCTCACCCACGCAAGCCGAGACACCACCCAGAGTGCAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp CAGAGCGACTTGGACAGATGTGAGCTGACCTGCCTGGCGAGCTCCTTCTGCCTTCAGCCCCGTTCCTGCTaGCCCCACAAGCGTGCACCC +
Preference number: 4 (lower is better)
Translates to: QSDLDRCELTCLASSFCLQPRSC*PHKRAP
Trigger: GGGTGCACGCTTGTGGGGGCAGCAGGAACGGGGCTG...AAGGCAGAAGGAGCTCGCCAGGCAGGTCAGCTCACATCTGTCCAAGTCGCTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp ACCTTGCCTTTCCCCGGGCACAGCCCGAAGGTCCTGCCTCCTGAGGCAGTTTTGGCGGCCAGAGCTTCCTaGCCTTCAGCTGGAAGGAGC +
Preference number: 4 (lower is better)
Translates to: TLPFPGHSPKVLPPEAVLAARAS*PSAGRS
Trigger: GCTCCTTCCAGCTGAAGGGCAGGAAGCTCTGGCCGC...CAAAACTGCCTCAGGAGGCAGGACCTTCGGGCTGTGCCCGGGGAAAGGCAAGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp GAAGGTGGCCGTGGCAAGGGAGGAGCTGCTCCCATGGCAGAGCATTCCTGCAGAGCGGCCAGAGCTTCCTaGCCTTCAGCTGGAAGGAGC +
Preference number: 4 (lower is better)
Translates to: EGGRGKGGAAPMAEHSCRAARAS*PSAGRS
Trigger: GCTCCTTCCAGCTGAAGGGCAGGAAGCTCTGGCCGC...TCTGCAGGAATGCTCTGCCATGGGAGCAGCTCCTCCCTTGCCACGGCCACCTTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp CTACAGGGGCTCTTGGGACAGCCTCACTGGACTCAGGGTGGACAGGTAACGTACTGCAGCTGGGGTGGCTaGGCCACCCTGGGAAAGCCC +
Preference number: 4 (lower is better)
Translates to: LQGLLGQPHWTQGGQVTYCSWGG*ATLGKP
Trigger: GGGCTTTCCCAGGGTGGCGCAGCCACCCCAGCTGCA...GTACGTTACCTGTCCACCCTGAGTCCAGTGAGGCTGTCCCAAGAGCCCCTGTAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp CACACTACAGGGGCTCTTGGGACAGCCTCACTGGACTCAGGGTGGACAGGTAACTGCAGCTGGGGTGGCTaGGCCACCCTGGGAAAGCCC +
Preference number: 4 (lower is better)
Translates to: HTTGALGTASLDSGWTGNCSWGG*ATLGKP
Trigger: GGGCTTTCCCAGGGTGGCGCAGCCACCCCAGCTGCA...GTTACCTGTCCACCCTGAGTCCAGTGAGGCTGTCCCAAGAGCCCCTGTAGTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp CCTGCACTCTGGGTGGTGTCTCGGCTTGCGTGGGTGAGGGCTCCCATTGGCCCAGAACTGAAGCACATCTaGGCTGGGCTGAGGAACCCC +
Preference number: 4 (lower is better)
Translates to: PALWVVSRLAWVRAPIGPELKHI*AGLRNP
Trigger: GGGGTTCCTCAGCCCAGCGCAGATGTGCTTCAGTTC...TGGGCCAATGGGAGCCCTCACCCACGCAAGCCGAGACACCACCCAGAGTGCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp GGCAGGAAGGAGGCGGTCCTGCAGAATACAGCGTGCTGGGGGCAGAGGCCAGTCCTCCAACCCCTGCACTaGTGGGAAAACCATCCGCCT +
Preference number: 4 (lower is better)
Translates to: GRKEAVLQNTACWGQRPVLQPLH*WENHPP
Trigger: AGGCGGATGGTTTTCCCAGCAGTGCAGGGGTTGGAG...GACTGGCCTCTGCCCCCAGCACGCTGTATTCTGCAGGACCGCCTCCTTCCTGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp CTTCAGGAGGTGGCCTCGGGTAGCAGGTGCCCAGCCCCCAAGAGATGGGTGTGGCTCCAACCCCTGCACTaGTGGGAAAACCATCCGCCT +
Preference number: 4 (lower is better)
Translates to: LQEVASGSRCPAPKRWVWLQPLH*WENHPP
Trigger: AGGCGGATGGTTTTCCCAGCAGTGCAGGGGTTGGAG...CCACACCCATCTCTTGGGGGCTGGGCACCTGCTACCCGAGGCCACCTCCTGAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp GTGCTCCGGGACGGTCAAGGTTCGGCCACCAAGGCTCAGGCTGCTCCTCGTGGACCTCCCTCCAACCCCTaGACTGCTGGGAAAACCATC +
Preference number: 4 (lower is better)
Translates to: VLRDGQGSATKAQAAPRGPPSNP*TAGKTI
Trigger: GATGGTTTTCCCAGCAGTGCAGGGGTTGGAGGGAGG...TCCACGAGGAGCAGCCTGAGCCTTGGTGGCCGAACCTTGACCGTCCCGGAGCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp GCTGTAGTCGTGGCCCTGCTTCAGGTCCTGCAGGCCCCGCCAGATGGTCATGCGCCTCCCTCCAACCCCTaGACTGCTGGGAAAACCATC +
Preference number: 4 (lower is better)
Translates to: AVVVALLQVLQAPPDGHAPPSNP*TAGKTI
Trigger: GATGGTTTTCCCAGCAGTGCAGGGGTTGGAGGGAGG...CGCATGACCATCTGGCGGGGCCTGCAGGACCTGAAGCAGGGCCACGACTACAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000604074.5
CDS-3UTR GCA 90 bp GGGCAGGAAGGAGGCGGTCCTGCAGAATACAGCGTGCTGGGGGCAGAGGCCAGTAGATGTGAGCTGACCTaGCTGGCGAGCTCCTTCTGC +
Preference number: 4 (lower is better)
Translates to: GQEGGGPAEYSVLGAEASRCELT*LASSFC
Trigger: GCAGAAGGAGCTCGCCAGGCAGGTCAGCTCACATCT...ACTGGCCTCTGCCCCCAGCACGCTGTATTCTGCAGGACCGCCTCCTTCCTGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp GGGTGTCAGGATGGGCCCCCGCGGCTCCTGAAGTGGAACATGGGGGAAGAGTGGAGATGTGAGCTGACCTaGCTGGCGAGCTCCTTCTGC +
Preference number: 4 (lower is better)
Translates to: GCQDGPPRLLKWNMGEEWRCELT*LASSFC
Trigger: GCAGAAGGAGCTCGCCAGGCAGGTCAGCTCACATCT...CCACTCTTCCCCCATGTTCCACTTCAGGAGCCGCGGGGGCCCATCCTGACACCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp GGACCTTGCCTTTCCCCGGGCACAGCCCGAAGGTCCTGCCTCCTGAGGCAGTTTGCCGTTGGCTGGCACTaGGTGGCCATGGTTGTTGAG +
Preference number: 4 (lower is better)
Translates to: GPCLSPGTARRSCLLRQFAVGWH*VAMVVE
Trigger: CTCAACAACCATGGCCACGCAGTGCCAGCCAACGGC...AAACTGCCTCAGGAGGCAGGACCTTCGGGCTGTGCCCGGGGAAAGGCAAGGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354437.8
ENST00000357733.7
ENST00000378280.5
ENST00000378285.5
ENST00000378288.8
ENST00000378295.9
CDS-3UTR GCA 90 bp TCAACAAGCCCTCTGGAACTGAAGCACATCTGCGCTGGGCTGAGGAACCCCGGGGGGCGCTGTGGCTGCTaGTCATCTCGCCGTTGGCTG +
Preference number: 4 (lower is better)
Translates to: STSPLELKHICAGLRNPGGRCGC*SSRRWL
Trigger: CAGCCAACGGCGAGATGAGCAGCAGCCACAGCGCCC...CCCGGGGTTCCTCAGCCCAGCGCAGATGTGCTTCAGTTCCAGAGGGCTTGTTGA
63% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
CDS-3UTR GCA 90 bp AGGCCCTCAGTGGATCTCGGCCTCCGTGAACTCCTCCTTGATGGGCTGCTTGCGACTGGGCGCTGTGGCTaGTGCTCATCTCGCCGTTGG +
Preference number: 4 (lower is better)
Translates to: RPSVDLGLRELLLDGLLATGRCG*CSSRRW
Trigger: CCAACGGCGAGATGAGCAGCAGCCACAGCGCCCAGT...CGCAAGCAGCCCATCAAGGAGGAGTTCACGGAGGCCGAGATCCACTGAGGGCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
CDS-3UTR CCA 90 bp TCAACAAGCCCTCTGGAACTGAAGCACATCTGCGCTGGGCTGAGGAACCCCGGGCAGGGGAGGTGGCGGTaGACTGGGCCATCTTCCCCA +
Preference number: 4 (lower is better)
Translates to: STSPLELKHICAGLRNPGQGRWR*TGPSSP
Trigger: TGGGGAAGATGGCCCAGTCCACCGCCACCTCCCCTG...CCCGGGGTTCCTCAGCCCAGCGCAGATGTGCTTCAGTTCCAGAGGGCTTGTTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp GGACCTTGCCTTTCCCCGGGCACAGCCCGAAGGTCCTGCCTCCTGAGGCAGTTTAGAGGTGCTCAAACGTaGTGCCCCCATCAGGGGAGG +
Preference number: 4 (lower is better)
Translates to: GPCLSPGTARRSCLLRQFRGAQT*CPHQGR
Trigger: CCTCCCCTGATGGGGGCACCACGTTTGAGCACCTCT...AAACTGCCTCAGGAGGCAGGACCTTCGGGCTGTGCCCGGGGAAAGGCAAGGTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000354437.8
ENST00000357733.7
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp ATGGTGATGGTGTGGCGCACGCGGAAGTGCACGGCCTCCATGACCCGCTGGCGCGTCATGCCCTCCAGGTaGAAGACGTCCATGCTGGAA +
Preference number: 4 (lower is better)
Translates to: MVMVWRTRKCTASMTRWRVMPSR*KTSMLE
Trigger: TTCCAGCATGGACGTCTTCCACCTGGAGGGCATGAC...GCGCCAGCGGGTCATGGAGGCCGTGCACTTCCGCGTGCGCCACACCATCACCAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354437.8
ENST00000604074.5
CDS-3UTR CCA 90 bp GCGGTGGCGCAGGCTGCAGCCAGGCGAGGCCCTCAGTGGATCTCGGCCTCCGTGCTCAGCAGATTGAACTaGGCCATGACAGATGTAGTC +
Preference number: 4 (lower is better)
Translates to: AVAQAAARRGPQWISASVLSRLN*AMTDVV
Trigger: GACTACATCTGTCATGGCCCAGTTCAATCTGCTGAG...CACGGAGGCCGAGATCCACTGAGGGCCTCGCCTGGCTGCAGCCTGCGCCACCGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354437.8
ENST00000604074.5
CDS-3UTR CCA 90 bp GGCCACCAAGGCTCAGGCTGCTCCTCGTGGATGGAGGTGGCCCCAGAAAGGGCCACATGGTGTCGAAGGTaGAGCTGGGTTGTGCGTAGG +
Preference number: 4 (lower is better)
Translates to: GHQGSGCSSWMEVAPERATWCRR*SWVVRR
Trigger: CCTACGCACAACCCAGCTCCACCTTCGACACCATGT...GGCCCTTTCTGGGGCCACCTCCATCCACGAGGAGCAGCCTGAGCCTTGGTGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp GAGCAGCTGCTGCGCGGTGCTGTAGTCGTGGCCCTGCTTCAGGTCCTGCAGGCCACATGGTGTCGAAGGTaGAGCTGGGTTGTGCGTAGG +
Preference number: 4 (lower is better)
Translates to: EQLLRGAVVVALLQVLQATWCRR*SWVVRR
Trigger: CCTACGCACAACCCAGCTCCACCTTCGACACCATGT...GGCCTGCAGGACCTGAAGCAGGGCCACGACTACAGCACCGCGCAGCAGCTGCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR CCA 90 bp CTGCTTGCGGGCCTTGCAGTCGGGCAGGTCGAAGCCGAAGTCCGCCCACTCGTCGCCGTGCTGGACTGCTaGAAAGTGACCTCAAAGTGG +
Preference number: 4 (lower is better)
Translates to: LLAGLAVGQVEAEVRPLVAVLDC*KVTSKW
Trigger: CCACTTTGAGGTCACTTTCCAGCAGTCCAGCACGGC...GACGAGTGGGCGGACTTCGGCTTCGACCTGCCCGACTGCAAGGCCCGCAAGCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR CCA 90 bp GCTCCGGTTCCCTGCCCTGAAGCTGTGCTCCGGGACGGTCAAGGTTCGGCCACCGCCGTGCTGGACTGCTaGAAAGTGACCTCAAAGTGG +
Preference number: 4 (lower is better)
Translates to: APVPCPEAVLRDGQGSATAVLDC*KVTSKW
Trigger: CCACTTTGAGGTCACTTTCCAGCAGTCCAGCACGGC...GGTGGCCGAACCTTGACCGTCCCGGAGCACAGCTTCAGGGCAGGGAACCGGAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp GGCCACCAAGGCTCAGGCTGCTCCTCGTGGATGGAGGTGGCCCCAGAAAGGGCCGCCGTGCTGGACTGCTaGAAAGTGACCTCAAAGTGG +
Preference number: 4 (lower is better)
Translates to: GHQGSGCSSWMEVAPERAAVLDC*KVTSKW
Trigger: CCACTTTGAGGTCACTTTCCAGCAGTCCAGCACGGC...GGCCCTTTCTGGGGCCACCTCCATCCACGAGGAGCAGCCTGAGCCTTGGTGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp CAGCTGGGGCCATCTGGCTGCTCCGTGTTCTGGCCGGCTTCCTTGGACATCTGGTCCAGGTGGCTGACTTaGCCGTGCTGGACTGCTGGA +
Preference number: 4 (lower is better)
Translates to: QLGPSGCSVFWPASLDIWSRWLT*PCWTAG
Trigger: TCCAGCAGTCCAGCACGGCCAAGTCAGCCACCTGGA...CCAGATGTCCAAGGAAGCCGGCCAGAACACGGAGCAGCCAGATGGCCCCAGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp ACCTTGCCTTTCCCCGGGCACAGCCCGAAGGTCCTGCCTCCTGAGGCAGTTTTGGGGAGTACGTCCAGGTaGCTGACTTGGCCGTGCTGG +
Preference number: 4 (lower is better)
Translates to: TLPFPGHSPKVLPPEAVLGSTSR*LTWPCW
Trigger: CCAGCACGGCCAAGTCAGCCACCTGGACGTACTCCC...CAAAACTGCCTCAGGAGGCAGGACCTTCGGGCTGTGCCCGGGGAAAGGCAAGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000346387.8
ENST00000354437.8
ENST00000357733.7
ENST00000378280.5
ENST00000378285.5
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp GAAGGTGGCCGTGGCAAGGGAGGAGCTGCTCCCATGGCAGAGCATTCCTGCAGAGGGAGTACGTCCAGGTaGCTGACTTGGCCGTGCTGG +
Preference number: 4 (lower is better)
Translates to: EGGRGKGGAAPMAEHSCRGSTSR*LTWPCW
Trigger: CCAGCACGGCCAAGTCAGCCACCTGGACGTACTCCC...TCTGCAGGAATGCTCTGCCATGGGAGCAGCTCCTCCCTTGCCACGGCCACCTTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp GGGCAGGAAGGAGGCGGTCCTGCAGAATACAGCGTGCTGGGGGCAGAGGCCAGTTCTTGTAAACAGGCATaGCCCGGATGGCGGTGCCTG +
Preference number: 4 (lower is better)
Translates to: GQEGGGPAEYSVLGAEASSCKQA*PGWRCL
Trigger: CAGGCACCGCCATCCGGGCCATGCCTGTTTACAAGA...ACTGGCCTCTGCCCCCAGCACGCTGTATTCTGCAGGACCGCCTCCTTCCTGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp CTCCCCACCCGGCCTTCCTGGGAACAAGTCCCGCCCACCTGGCTTCTCACTCAGTCTTGTAAACAGGCATaGCCCGGATGGCGGTGCCTG +
Preference number: 4 (lower is better)
Translates to: LPTRPSWEQVPPTWLLTQSCKQA*PGWRCL
Trigger: CAGGCACCGCCATCCGGGCCATGCCTGTTTACAAGA...CTGAGTGAGAAGCCAGGTGGGCGGGACTTGTTCCCAGGAAGGCCGGGTGGGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp TCGGGTAGCAGGTGCCCAGCCCCCAAGAGATGGGTGTGGTGCCTGGGGCATGGGGATGAGGTGGCTGGCTaGAGCAGACTGTCCTTCGTT +
Preference number: 4 (lower is better)
Translates to: SGSRCPAPKRWVWCLGHGDEVAG*SRLSFV
Trigger: AACGAAGGACAGTCTGCTCCAGCCAGCCACCTCATC...CCCATGCCCCAGGCACCACACCCATCTCTTGGGGGCTGGGCACCTGCTACCCGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp CGCTGCAGTTCCCCTGAGCCGCCGATGGAGATGGTGGCCGCGTTGCTAGAGCGGGATGAGGTGGCTGGCTaGAGCAGACTGTCCTTCGTT +
Preference number: 4 (lower is better)
Translates to: RCSSPEPPMEMVAALLERDEVAG*SRLSFV
Trigger: AACGAAGGACAGTCTGCTCCAGCCAGCCACCTCATC...CCGCTCTAGCAACGCGGCCACCATCTCCATCGGCGGCTCAGGGGAACTGCAGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR CCA 90 bp GAAGGTGGCCGTGGCAAGGGAGGAGCTGCTCCCATGGCAGAGCATTCCTGCAGACGTCCCCACCTGTGGTaGCTCATAGGGCACCACGAC +
Preference number: 4 (lower is better)
Translates to: EGGRGKGGAAPMAEHSCRRPHLW*LIGHHD
Trigger: GTCGTGGTGCCCTATGAGCCACCACAGGTGGGGACG...TCTGCAGGAATGCTCTGCCATGGGAGCAGCTCCTCCCTTGCCACGGCCACCTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp GCCCTTCCCAGGAGCACACTACAGGGGCTCTTGGGACAGCCTCACTGGACTCAGCGTCCCCACCTGTGGTaGCTCATAGGGCACCACGAC +
Preference number: 4 (lower is better)
Translates to: ALPRSTLQGLLGQPHWTQRPHLW*LIGHHD
Trigger: GTCGTGGTGCCCTATGAGCCACCACAGGTGGGGACG...CTGAGTCCAGTGAGGCTGTCCCAAGAGCCCCTGTAGTGTGCTCCTGGGAAGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp CCCATTGGCCCACCTGCCTGCAATGAAGGGCCTCGTCACACCCGTGAGGCCCCCATAGGAGTCCACCAGTaGCTGCGGCACCAACTCCAT +
Preference number: 4 (lower is better)
Translates to: PIGPPACNEGPRHTREAPIGVHQ*LRHQLH
Trigger: ATGGAGTTGGTGCCGCAGCCACTGGTGGACTCCTAT...GGGGGCCTCACGGGTGTGACGAGGCCCTTCATTGCAGGCAGGTGGGCCAATGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp GGCAGGAAGGAGGCGGTCCTGCAGAATACAGCGTGCTGGGGGCAGAGGCCAGTCCCCCCAGGTCCTCAATaGTCAGGTTCTGCAGGTGGT +
Preference number: 4 (lower is better)
Translates to: GRKEAVLQNTACWGQRPVPPGPQ*SGSAGG
Trigger: ACCACCTGCAGAACCTGACCATTGAGGACCTGGGGG...GACTGGCCTCTGCCCCCAGCACGCTGTATTCTGCAGGACCGCCTCCTTCCTGCC
63% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000346387.8
ENST00000378288.8
ENST00000378295.9
CDS-3UTR CCA 90 bp CAGCTGCTGCGCGGTGCTGTAGTCGTGGCCCTGCTTCAGGTCCTGCAGGCCCCGCTCCTGAGGCAGTTTTaGACACACAGGAAGGAGAGG +
Preference number: 4 (lower is better)
Translates to: QLLRGAVVVALLQVLQAPLLRQF*THRKER
Trigger: CCTCTCCTTCCTGTGTGTCCAAAACTGCCTCAGGAG...CGGGGCCTGCAGGACCTGAAGCAGGGCCACGACTACAGCACCGCGCAGCAGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR CCA 90 bp CACACTACAGGGGCTCTTGGGACAGCCTCACTGGACTCAGGGTGGACAGGTAACGGCGGCTTCGGTGGCTaGGCCTTTCCTGGGGCCTGT +
Preference number: 4 (lower is better)
Translates to: HTTGALGTASLDSGWTGNGGFGG*AFPGAC
Trigger: ACAGGCCCCAGGAAAGGCCCAGCCACCGAAGCCGCC...GTTACCTGTCCACCCTGAGTCCAGTGAGGCTGTCCCAAGAGCCCCTGTAGTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp AGCACACTACAGGGGCTCTTGGGACAGCCTCACTGGACTCAGGGTGGACAGGTACACAGGCGGCTTCGGTaGCTGGGCCTTTCCTGGGGC +
Preference number: 4 (lower is better)
Translates to: STLQGLLGQPHWTQGGQVHRRLR*LGLSWG
Trigger: GCCCCAGGAAAGGCCCAGCCACCGAAGCCGCCTGTG...TACCTGTCCACCCTGAGTCCAGTGAGGCTGTCCCAAGAGCCCCTGTAGTGTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp GCTCCGGTTCCCTGCCCTGAAGCTGTGCTCCGGGACGGTCAAGGTTCGGCCACCTGGAAGGACCTCGCCTaGTTGGGAGATGACAGTCTC +
Preference number: 4 (lower is better)
Translates to: APVPCPEAVLRDGQGSATWKDLA*LGDDSL
Trigger: GAGACTGTCATCTCCCAACCAGGCGAGGTCCTTCCA...GGTGGCCGAACCTTGACCGTCCCGGAGCACAGCTTCAGGGCAGGGAACCGGAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp GGGATGGGCCGGACCTTGCCTTTCCCCGGGCACAGCCCGAAGGTCCTGCCTCCTGAGGATCCTTTCCTTTaGAAGGACCTCGCCTGGTTG +
Preference number: 4 (lower is better)
Translates to: GMGRTLPFPGHSPKVLPPEDPFL*KDLAWL
Trigger: CAACCAGGCGAGGTCCTTCCAAAGGAAAGGATCCTC...AGGAGGCAGGACCTTCGGGCTGTGCCCGGGGAAAGGCAAGGTCCGGCCCATCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp GAAGGTGGCCGTGGCAAGGGAGGAGCTGCTCCCATGGCAGAGCATTCCTGCAGACAGGCTGAGGGGCACTaGCTGAGGCGGTACCACATG +
Preference number: 4 (lower is better)
Translates to: EGGRGKGGAAPMAEHSCRQAEGH*LRRYHM
Trigger: CATGTGGTACCGCCTCAGCCAGTGCCCCTCAGCCTG...TCTGCAGGAATGCTCTGCCATGGGAGCAGCTCCTCCCTTGCCACGGCCACCTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp CCCATTGGCCCACCTGCCTGCAATGAAGGGCCTCGTCACACCCGTGAGGCCCCCGAGGAGCTGCTCCCATaGCAGAGCATTCCTGCAGAT +
Preference number: 4 (lower is better)
Translates to: PIGPPACNEGPRHTREAPEELLP*QSIPAD
Trigger: ATCTGCAGGAATGCTCTGCCATGGGAGCAGCTCCTC...GGGGGCCTCACGGGTGTGACGAGGCCCTTCATTGCAGGCAGGTGGGCCAATGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp GCCCTTCCCAGGAGCACACTACAGGGGCTCTTGGGACAGCCTCACTGGACTCAGCCTCGTGGATGGAGGTaGCCCCAGAAAGGGCCTGTG +
Preference number: 4 (lower is better)
Translates to: ALPRSTLQGLLGQPHWTQPRGWR*PQKGPV
Trigger: CACAGGCCCTTTCTGGGGCCACCTCCATCCACGAGG...CTGAGTCCAGTGAGGCTGTCCCAAGAGCCCCTGTAGTGTGCTCCTGGGAAGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp ACCTTGCCTTTCCCCGGGCACAGCCCGAAGGTCCTGCCTCCTGAGGCAGTTTTGGCTGCTCCTCGTGGATaGAGGTGGCCCCAGAAAGGG +
Preference number: 4 (lower is better)
Translates to: TLPFPGHSPKVLPPEAVLAAPRG*RWPQKG
Trigger: CCCTTTCTGGGGCCACCTCCATCCACGAGGAGCAGC...CAAAACTGCCTCAGGAGGCAGGACCTTCGGGCTGTGCCCGGGGAAAGGCAAGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp GGACCTTGCCTTTCCCCGGGCACAGCCCGAAGGTCCTGCCTCCTGAGGCAGTTTTCAGGCTGCTCCTCGTaGATGGAGGTGGCCCCAGAA +
Preference number: 4 (lower is better)
Translates to: GPCLSPGTARRSCLLRQFSGCSS*MEVAPE
Trigger: TTCTGGGGCCACCTCCATCCACGAGGAGCAGCCTGA...AAACTGCCTCAGGAGGCAGGACCTTCGGGCTGTGCCCGGGGAAAGGCAAGGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp CTACAGGGGCTCTTGGGACAGCCTCACTGGACTCAGGGTGGACAGGTAACGTACCAGGGGGTGTGGAGCTaGCCGTGCCAGAAGGGGCCA +
Preference number: 4 (lower is better)
Translates to: LQGLLGQPHWTQGGQVTYQGVWS*PCQKGP
Trigger: TGGCCCCTTCTGGCACGGCCAGCTCCACACCCCCTG...GTACGTTACCTGTCCACCCTGAGTCCAGTGAGGCTGTCCCAAGAGCCCCTGTAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp GCTCCGGTTCCCTGCCCTGAAGCTGTGCTCCGGGACGGTCAAGGTTCGGCCACCGTCCTGATCTGGGGATaGGGGCTGTGTCTAACCTTG +
Preference number: 4 (lower is better)
Translates to: APVPCPEAVLRDGQGSATVLIWG*GLCLTL
Trigger: CAAGGTTAGACACAGCCCCCATCCCCAGATCAGGAC...GGTGGCCGAACCTTGACCGTCCCGGAGCACAGCTTCAGGGCAGGGAACCGGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp TCAACAAGCCCTCTGGAACTGAAGCACATCTGCGCTGGGCTGAGGAACCCCGGGGAGGTGACATGCAGCTaGGGTGGCTGCGCCACCCTG +
Preference number: 4 (lower is better)
Translates to: STSPLELKHICAGLRNPGEVTCS*GGCATL
Trigger: CAGGGTGGCGCAGCCACCCCAGCTGCATGTCACCTC...CCCGGGGTTCCTCAGCCCAGCGCAGATGTGCTTCAGTTCCAGAGGGCTTGTTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp CAGAGCGACTTGGACAGATGTGAGCTGACCTGCCTGGCGAGCTCCTTCTGCCTTGGGGGCTTCAGGAGGTaGCCTCGGGTAGCAGGTGCC +
Preference number: 4 (lower is better)
Translates to: QSDLDRCELTCLASSFCLGGFRR*PRVAGA
Trigger: GGCACCTGCTACCCGAGGCCACCTCCTGAAGCCCCC...AAGGCAGAAGGAGCTCGCCAGGCAGGTCAGCTCACATCTGTCCAAGTCGCTCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp CCTGCACTCTGGGTGGTGTCTCGGCTTGCGTGGGTGAGGGCTCCCATTGGCCCACACTACAGGGGCTCTTaGGACAGCCTCACTGGACTC +
Preference number: 4 (lower is better)
Translates to: PALWVVSRLAWVRAPIGPHYRGS*DSLTGL
Trigger: GAGTCCAGTGAGGCTGTCCCAAGAGCCCCTGTAGTG...TGGGCCAATGGGAGCCCTCACCCACGCAAGCCGAGACACCACCCAGAGTGCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp GGCCTGGTGGGAACGCTGGGGGAATGGGGGAGAGTCGCTGTTTCTGACCAGAGCGGCTGCTCCGTGTTCTaGCCGGCTTCCTTGGACATC +
Preference number: 4 (lower is better)
Translates to: GLVGTLGEWGRVAVSDQSGCSVF*PASLDI
Trigger: GATGTCCAAGGAAGCCGGCCAGAACACGGAGCAGCC...GCTCTGGTCAGAAACAGCGACTCTCCCCCATTCCCCCAGCGTTCCCACCAGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp GAAGGTGGCCGTGGCAAGGGAGGAGCTGCTCCCATGGCAGAGCATTCCTGCAGACTAGACAGGTGCAGCTaGGGCCATCTGGCTGCTCCG +
Preference number: 4 (lower is better)
Translates to: EGGRGKGGAAPMAEHSCRLDRCS*GHLAAP
Trigger: CGGAGCAGCCAGATGGCCCCAGCTGCACCTGTCTAG...TCTGCAGGAATGCTCTGCCATGGGAGCAGCTCCTCCCTTGCCACGGCCACCTTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp GTGCTCCGGGACGGTCAAGGTTCGGCCACCAAGGCTCAGGCTGCTCCTCGTGGAGGAACGCTGGGGGAATaGGGGAGAGTCGCTGTTTCT +
Preference number: 4 (lower is better)
Translates to: VLRDGQGSATKAQAAPRGGTLGE*GRVAVS
Trigger: AGAAACAGCGACTCTCCCCCATTCCCCCAGCGTTCC...TCCACGAGGAGCAGCCTGAGCCTTGGTGGCCGAACCTTGACCGTCCCGGAGCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp GGGCAGGAAGGAGGCGGTCCTGCAGAATACAGCGTGCTGGGGGCAGAGGCCAGTGGAACGCTGGGGGAATaGGGGAGAGTCGCTGTTTCT +
Preference number: 4 (lower is better)
Translates to: GQEGGGPAEYSVLGAEASGTLGE*GRVAVS
Trigger: AGAAACAGCGACTCTCCCCCATTCCCCCAGCGTTCC...ACTGGCCTCTGCCCCCAGCACGCTGTATTCTGCAGGACCGCCTCCTTCCTGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp GAAGGTGGCCGTGGCAAGGGAGGAGCTGCTCCCATGGCAGAGCATTCCTGCAGAGGCACTGCGTGGCCATaGTTGTTGAGCATCCCGGGG +
Preference number: 4 (lower is better)
Translates to: EGGRGKGGAAPMAEHSCRGTAWP*LLSIPG
Trigger: CCCCGGGATGCTCAACAACCATGGCCACGCAGTGCC...TCTGCAGGAATGCTCTGCCATGGGAGCAGCTCCTCCCTTGCCACGGCCACCTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
CDS-3UTR CCA 90 bp GATGGGCTGCTTGCGGGCCTTGCAGTCGGGCAGGTCGAAGCCGAAGTCCGCCCATTGGCTGGCACTGCGTaGCCATGGTTGTTGAGCATC +
Preference number: 4 (lower is better)
Translates to: DGLLAGLAVGQVEAEVRPLAGTA*PWLLSI
Trigger: GATGCTCAACAACCATGGCCACGCAGTGCCAGCCAA...TGGGCGGACTTCGGCTTCGACCTGCCCGACTGCAAGGCCCGCAAGCAGCCCATC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
CDS-3UTR CCA 90 bp GAAGGTGGCCGTGGCAAGGGAGGAGCTGCTCCCATGGCAGAGCATTCCTGCAGAATGGACTGGGCGCTGTaGCTGCTGCTCATCTCGCCG +
Preference number: 4 (lower is better)
Translates to: EGGRGKGGAAPMAEHSCRMDWAL*LLLISP
Trigger: CGGCGAGATGAGCAGCAGCCACAGCGCCCAGTCCAT...TCTGCAGGAATGCTCTGCCATGGGAGCAGCTCCTCCCTTGCCACGGCCACCTTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
CDS-3UTR CCA 90 bp GGACCTTGCCTTTCCCCGGGCACAGCCCGAAGGTCCTGCCTCCTGAGGCAGTTTGGAACTGGTGTCCCGTaGGACGAGGCATGGATCTGG +
Preference number: 4 (lower is better)
Translates to: GPCLSPGTARRSCLLRQFGTGVP*DEAWIW
Trigger: CCAGATCCATGCCTCGTCCCACGGGACACCAGTTCC...AAACTGCCTCAGGAGGCAGGACCTTCGGGCTGTGCCCGGGGAAAGGCAAGGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378280.5
ENST00000378285.5
ENST00000378288.8
CDS-3UTR TCA 90 bp AGGCCCTCAGTGGATCTCGGCCTCCGTGAACTCCTCCTTGATGGGCTGCTTGCGCGCTCTGCCTGCCGGTaGCAGGGTCATCCACATACT +
Preference number: 4 (lower is better)
Translates to: RPSVDLGLRELLLDGLLARSACR*QGHPHT
Trigger: AGTATGTGGATGACCCTGTCACCGGCAGGCAGAGCG...CGCAAGCAGCCCATCAAGGAGGAGTTCACGGAGGCCGAGATCCACTGAGGGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR TCA 90 bp GTGGCGCACGCGGAAGTGCACGGCCTCCATGACCCGCTGGCGCTGCAGTTCCCCGTAACCCTTGGGAGGTaGAATACTCGATGCAGTTTG +
Preference number: 4 (lower is better)
Translates to: VAHAEVHGLHDPLALQFPVTLGR*NTRCSL
Trigger: CAAACTGCATCGAGTATTTCACCTCCCAAGGGTTAC...GGGGAACTGCAGCGCCAGCGGGTCATGGAGGCCGTGCACTTCCGCGTGCGCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378280.5
CDS-3UTR TCA 90 bp CAGAGCGACTTGGACAGATGTGAGCTGACCTGCCTGGCGAGCTCCTTCTGCCTTAGTGCACGGCCTCCATaGCCCGCTGGCGCTGCAGTT +
Preference number: 4 (lower is better)
Translates to: QSDLDRCELTCLASSFCLSARPP*PAGAAV
Trigger: AACTGCAGCGCCAGCGGGTCATGGAGGCCGTGCACT...AAGGCAGAAGGAGCTCGCCAGGCAGGTCAGCTCACATCTGTCCAAGTCGCTCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR TCA 90 bp TCAACAAGCCCTCTGGAACTGAAGCACATCTGCGCTGGGCTGAGGAACCCCGGGCTGAGGGGCACTGGCTaGGGCGGTACCACATGCTTC +
Preference number: 4 (lower is better)
Translates to: STSPLELKHICAGLRNPGLRGTG*GGTTCF
Trigger: GAAGCATGTGGTACCGCCTCAGCCAGTGCCCCTCAG...CCCGGGGTTCCTCAGCCCAGCGCAGATGTGCTTCAGTTCCAGAGGGCTTGTTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR TCA 90 bp AGCCAGGCGAGGCCCTCAGTGGATCTCGGCCTCCGTGAACTCCTCCTTGATGGGAGCAAGATGGAGTCCTaGTCTGGGGATGGGGGCTGT +
Preference number: 4 (lower is better)
Translates to: SQARPSVDLGLRELLLDGSKMES*SGDGGC
Trigger: ACAGCCCCCATCCCCAGATCAGGACTCCATCTTGCT...CCCATCAAGGAGGAGTTCACGGAGGCCGAGATCCACTGAGGGCCTCGCCTGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000604074.5
CDS-3UTR TCA 90 bp GCCAGAGCTTCCTGCCCTTCAGCTGGAAGGAGCCGGAAGGAGCTGGAAGGAAGGCGACTTGGACAGATGTaGGCTGACCTGCCTGGCGAG +
Preference number: 4 (lower is better)
Translates to: ARASCPSAGRSRKELEGRRLGQM*ADLPGE
Trigger: CTCGCCAGGCAGGTCAGCTCACATCTGTCCAAGTCG...CCTTCCTTCCAGCTCCTTCCGGCTCCTTCCAGCTGAAGGGCAGGAAGCTCTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp TCAACAAGCCCTCTGGAACTGAAGCACATCTGCGCTGGGCTGAGGAACCCCGGGGGTGCTCAAACGTGGTaGCCCCATCAGGGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: STSPLELKHICAGLRNPGGAQTW*PHQGRW
Trigger: CCACCTCCCCTGATGGGGGCACCACGTTTGAGCACC...CCCGGGGTTCCTCAGCCCAGCGCAGATGTGCTTCAGTTCCAGAGGGCTTGTTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp CAGCTGGGGCCATCTGGCTGCTCCGTGTTCTGGCCGGCTTCCTTGGACATCTGGGGTGGAAGACGTCCATaGTGGAATCCGTTCCGCCCA +
Preference number: 4 (lower is better)
Translates to: QLGPSGCSVFWPASLDIWGGRRP*WNPFRP
Trigger: TGGGCGGAACGGATTCCAGCATGGACGTCTTCCACC...CCAGATGTCCAAGGAAGCCGGCCAGAACACGGAGCAGCCAGATGGCCCCAGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp GGGCCTTGCAGTCGGGCAGGTCGAAGCCGAAGTCCGCCCACTCGTCAGGGCCGCGGGTCATCCACATACTaGGAGAGATTATTGCCTTCC +
Preference number: 4 (lower is better)
Translates to: GPCSRAGRSRSPPTRQGRGSSTY*ERLLPS
Trigger: GGAAGGCAATAATCTCTCGCAGTATGTGGATGACCC...GCGGCCCTGACGAGTGGGCGGACTTCGGCTTCGACCTGCCCGACTGCAAGGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR GCA 90 bp TCAACAAGCCCTCTGGAACTGAAGCACATCTGCGCTGGGCTGAGGAACCCCGGGTGGGCCGCCGGTTCATaGCCCCTACACAGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: STSPLELKHICAGLRNPGWAAGS*PLHSCC
Trigger: ACAGCAGCTGTGTAGGGGGCATGAACCGGCGGCCCA...CCCGGGGTTCCTCAGCCCAGCGCAGATGTGCTTCAGTTCCAGAGGGCTTGTTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp GGACGGTGGGAGAGGGATGCCTGCGTCTTCGTAGACCAGGTACCTGCGGCAACAGTGTCCTCGTCTCCATaGCGCCGCTTCTTCACACCG +
Preference number: 4 (lower is better)
Translates to: GRWERDACVFVDQVPAATVSSSP*RRFFTP
Trigger: CGGTGTGAAGAAGCGGCGGCATGGAGACGAGGACAC...TGTTGCCGCAGGTACCTGGTCTACGAAGACGCAGGCATCCCTCTCCCACCGTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp GGTGCTGTAGTCGTGGCCCTGCTTCAGGTCCTGCAGGCCCCGCCAGATGGTCATATGGTCATGCGGTACTaGTCGGGGATCTTCAGGGCC +
Preference number: 4 (lower is better)
Translates to: GAVVVALLQVLQAPPDGHMVMRY*SGIFRA
Trigger: GGCCCTGAAGATCCCCGAGCAGTACCGCATGACCAT...ATGACCATCTGGCGGGGCCTGCAGGACCTGAAGCAGGGCCACGACTACAGCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR GCA 90 bp GCCAGAGCTTCCTGCCCTTCAGCTGGAAGGAGCCGGAAGGAGCTGGAAGGAAGGCCCGCCAGATGGTCATaGGGTACTGCTCGGGGATCT +
Preference number: 4 (lower is better)
Translates to: ARASCPSAGRSRKELEGRPARWS*GTARGS
Trigger: AGATCCCCGAGCAGTACCGCATGACCATCTGGCGGG...CCTTCCTTCCAGCTCCTTCCGGCTCCTTCCAGCTGAAGGGCAGGAAGCTCTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp CAGAGCGACTTGGACAGATGTGAGCTGACCTGCCTGGCGAGCTCCTTCTGCCTTCCCTGCTTCAGGTCCTaGAGGCCCCGCCAGATGGTC +
Preference number: 4 (lower is better)
Translates to: QSDLDRCELTCLASSFCLPCFRS*RPRQMV
Trigger: GACCATCTGGCGGGGCCTGCAGGACCTGAAGCAGGG...AAGGCAGAAGGAGCTCGCCAGGCAGGTCAGCTCACATCTGTCCAAGTCGCTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp ACCTTGCCTTTCCCCGGGCACAGCCCGAAGGTCCTGCCTCCTGAGGCAGTTTTGTCCTCCTTGATGGGCTaGTTGCGGGCCTTGCAGTCG +
Preference number: 4 (lower is better)
Translates to: TLPFPGHSPKVLPPEAVLSSLMG*LRALQS
Trigger: CGACTGCAAGGCCCGCAAGCAGCCCATCAAGGAGGA...CAAAACTGCCTCAGGAGGCAGGACCTTCGGGCTGTGCCCGGGGAAAGGCAAGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000346387.8
ENST00000354437.8
ENST00000357733.7
ENST00000378280.5
ENST00000378285.5
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp GCCAGAGCTTCCTGCCCTTCAGCTGGAAGGAGCCGGAAGGAGCTGGAAGGAAGGCTGCAGAATACAGCGTaGTGGGGGCAGAGGCCAGTC +
Preference number: 4 (lower is better)
Translates to: ARASCPSAGRSRKELEGRLQNTA*WGQRPV
Trigger: GACTGGCCTCTGCCCCCAGCACGCTGTATTCTGCAG...CCTTCCTTCCAGCTCCTTCCGGCTCCTTCCAGCTGAAGGGCAGGAAGCTCTGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp GCAGAGAGAGTCCCCAGCCCCCGGCGCGGGCAAGACGCAGTTAGGGACATTCCCAGATTTGCCTGGATTTaGCCTTCCTGGGGTTCCCTC +
Preference number: 4 (lower is better)
Translates to: AERVPSPRRGQDAVRDIPRFAWI*PSWGSL
Trigger: GAGGGAACCCCAGGAAGGGCAAATCCAGGCAAATCT...GGGAATGTCCCTAACTGCGTCTTGCCCGCGCCGGGGGCTGGGGACTCTCTCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp CTGCTTGCGGGCCTTGCAGTCGGGCAGGTCGAAGCCGAAGTCCGCCCACTCGTCAGATTTGCCTGGATTTaGCCTTCCTGGGGTTCCCTC +
Preference number: 4 (lower is better)
Translates to: LLAGLAVGQVEAEVRPLVRFAWI*PSWGSL
Trigger: GAGGGAACCCCAGGAAGGGCAAATCCAGGCAAATCT...GACGAGTGGGCGGACTTCGGCTTCGACCTGCCCGACTGCAAGGCCCGCAAGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000604074.5
CDS-3UTR GCA 90 bp GTGTCAGGATGGGCCCCCGCGGCTCCTGAAGTGGAACATGGGGGAAGAGTGGGGATGCCCTGTGGACCTTaGAGTGCTAGAGAAGGTGGC +
Preference number: 4 (lower is better)
Translates to: VSGWAPAAPEVEHGGRVGMPCGP*SAREGG
Trigger: GCCACCTTCTCTAGCACTGCAAGGTCCACAGGGCAT...CCCCACTCTTCCCCCATGTTCCACTTCAGGAGCCGCGGGGGCCCATCCTGACAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp CTTCAGGAGGTGGCCTCGGGTAGCAGGTGCCCAGCCCCCAAGAGATGGGTGTGGATGCCCTGTGGACCTTaGAGTGCTAGAGAAGGTGGC +
Preference number: 4 (lower is better)
Translates to: LQEVASGSRCPAPKRWVWMPCGP*SAREGG
Trigger: GCCACCTTCTCTAGCACTGCAAGGTCCACAGGGCAT...CCACACCCATCTCTTGGGGGCTGGGCACCTGCTACCCGAGGCCACCTCCTGAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp CCGCCGATGGAGATGGTGGCCGCGTTGCTAGAGCGGAGCAGCTGCTGCGCGGTGAGTCTGTTCCCTGACTaGCACCGCCTAGAAAGGAAA +
Preference number: 4 (lower is better)
Translates to: PPMEMVAALLERSSCCAVSLFPD*HRLERK
Trigger: TTTCCTTTCTAGGCGGTGGCAGTCAGGGAACAGACT...CACCGCGCAGCAGCTGCTCCGCTCTAGCAACGCGGCCACCATCTCCATCGGCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604074.5
CDS-3UTR GCA 90 bp GAAGGTGGCCGTGGCAAGGGAGGAGCTGCTCCCATGGCAGAGCATTCCTGCAGACACCAAGGCTCAGGCTaGTCCTCGTGGATGGAGGTG +
Preference number: 4 (lower is better)
Translates to: EGGRGKGGAAPMAEHSCRHQGSG*SSWMEV
Trigger: CACCTCCATCCACGAGGAGCAGCCTGAGCCTTGGTG...TCTGCAGGAATGCTCTGCCATGGGAGCAGCTCCTCCCTTGCCACGGCCACCTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp GAAGGTGGCCGTGGCAAGGGAGGAGCTGCTCCCATGGCAGAGCATTCCTGCAGACCTGCCCTGAAGCTGTaGTCCGGGACGGTCAAGGTT +
Preference number: 4 (lower is better)
Translates to: EGGRGKGGAAPMAEHSCRPALKL*SGTVKV
Trigger: AACCTTGACCGTCCCGGAGCACAGCTTCAGGGCAGG...TCTGCAGGAATGCTCTGCCATGGGAGCAGCTCCTCCCTTGCCACGGCCACCTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp CCCCAAGAGATGGGTGTGGTGCCTGGGGCATGGGTCTTAGCCTTTCTGGTCTCAAGGGGCCAGGCAGCCTaGACTCTGGGTGGTGTCTCG +
Preference number: 4 (lower is better)
Translates to: PQEMGVVPGAWVLAFLVSRGQAA*TLGGVS
Trigger: CGAGACACCACCCAGAGTGCAGGCTGCCTGGCCCCT...TGAGACCAGAAAGGCTAAGACCCATGCCCCAGGCACCACACCCATCTCTTGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp CACACTACAGGGGCTCTTGGGACAGCCTCACTGGACTCAGGGTGGACAGGTAACAGGGGCCAGGCAGCCTaGACTCTGGGTGGTGTCTCG +
Preference number: 4 (lower is better)
Translates to: HTTGALGTASLDSGWTGNRGQAA*TLGGVS
Trigger: CGAGACACCACCCAGAGTGCAGGCTGCCTGGCCCCT...GTTACCTGTCCACCCTGAGTCCAGTGAGGCTGTCCCAAGAGCCCCTGTAGTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp CTCCCCACCCGGCCTTCCTGGGAACAAGTCCCGCCCACCTGGCTTCTCACTCAGTGGGAGAGGGATGCCTaGGTCTTCGTAGACCAGGTA +
Preference number: 4 (lower is better)
Translates to: LPTRPSWEQVPPTWLLTQWERDA*VFVDQV
Trigger: TACCTGGTCTACGAAGACGCAGGCATCCCTCTCCCA...CTGAGTGAGAAGCCAGGTGGGCGGGACTTGTTCCCAGGAAGGCCGGGTGGGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp GGGTGTCAGGATGGGCCCCCGCGGCTCCTGAAGTGGAACATGGGGGAAGAGTGGTGGGAGAGGGATGCCTaGGTCTTCGTAGACCAGGTA +
Preference number: 4 (lower is better)
Translates to: GCQDGPPRLLKWNMGEEWWERDA*VFVDQV
Trigger: TACCTGGTCTACGAAGACGCAGGCATCCCTCTCCCA...CCACTCTTCCCCCATGTTCCACTTCAGGAGCCGCGGGGGCCCATCCTGACACCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp ATGGCAATAAGATGGAGAGCTGAGGTGACATGCAGCTGGGGTGGCTGCGCCACCCGACAGCCCCGTTCCTaGTGCCCCCACAAGCGTGCA +
Preference number: 4 (lower is better)
Translates to: MAIRWRAEVTCSWGGCATRQPRS*CPHKRA
Trigger: TGCACGCTTGTGGGGGCAGCAGGAACGGGGCTGTCG...GGTGGCGCAGCCACCCCAGCTGCATGTCACCTCAGCTCTCCATCTTATTGCCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp GGCCTGGTGGGAACGCTGGGGGAATGGGGGAGAGTCGCTGTTTCTGACCAGAGCGAACTGAAGCACATCTaGGCTGGGCTGAGGAACCCC +
Preference number: 4 (lower is better)
Translates to: GLVGTLGEWGRVAVSDQSELKHI*AGLRNP
Trigger: GGGGTTCCTCAGCCCAGCGCAGATGTGCTTCAGTTC...GCTCTGGTCAGAAACAGCGACTCTCCCCCATTCCCCCAGCGTTCCCACCAGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp GGCCTGGTGGGAACGCTGGGGGAATGGGGGAGAGTCGCTGTTTCTGACCAGAGCCCTCCCTCCAACCCCTaGACTGCTGGGAAAACCATC +
Preference number: 4 (lower is better)
Translates to: GLVGTLGEWGRVAVSDQSPPSNP*TAGKTI
Trigger: GATGGTTTTCCCAGCAGTGCAGGGGTTGGAGGGAGG...GCTCTGGTCAGAAACAGCGACTCTCCCCCATTCCCCCAGCGTTCCCACCAGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp AGTTCCCCTGAGCCGCCGATGGAGATGGTGGCCGCGTTGCTAGAGCGGAGCAGCGAGCTCCTTCTGCCTTaGCTCTCTGAGCAGACTCAG +
Preference number: 4 (lower is better)
Translates to: SSPEPPMEMVAALLERSSELLLP*LSEQTQ
Trigger: CTGAGTCTGCTCAGAGAGGCAAGGCAGAAGGAGCTC...GCTGCTCCGCTCTAGCAACGCGGCCACCATCTCCATCGGCGGCTCAGGGGAACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000604074.5
CDS-3UTR GCA 90 bp GCTGTAGTCGTGGCCCTGCTTCAGGTCCTGCAGGCCCCGCCAGATGGTCATGCGTTGTTCATGCCCCCGTaGACCTTGTTCATGGGCGAG +
Preference number: 4 (lower is better)
Translates to: AVVVALLQVLQAPPDGHALFMPP*TLFMGE
Trigger: CTCGCCCATGAACAAGGTGCACGGGGGCATGAACAA...CGCATGACCATCTGGCGGGGCCTGCAGGACCTGAAGCAGGGCCACGACTACAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354437.8
ENST00000378285.5
CDS-3UTR GCA 90 bp GGCAGGAAGGAGGCGGTCCTGCAGAATACAGCGTGCTGGGGGCAGAGGCCAGTCTTGTTCATGCCCCCGTaGACCTTGTTCATGGGCGAG +
Preference number: 4 (lower is better)
Translates to: GRKEAVLQNTACWGQRPVLFMPP*TLFMGE
Trigger: CTCGCCCATGAACAAGGTGCACGGGGGCATGAACAA...GACTGGCCTCTGCCCCCAGCACGCTGTATTCTGCAGGACCGCCTCCTTCCTGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000378288.8
ENST00000378295.9
CDS-3UTR GCA 90 bp CACACTACAGGGGCTCTTGGGACAGCCTCACTGGACTCAGGGTGGACAGGTAACGGGCGCTGTGGCTGCTaGTCATCTCGCCGTTGGCTG +
Preference number: 4 (lower is better)
Translates to: HTTGALGTASLDSGWTGNGRCGC*SSRRWL
Trigger: CAGCCAACGGCGAGATGAGCAGCAGCCACAGCGCCC...GTTACCTGTCCACCCTGAGTCCAGTGAGGCTGTCCCAAGAGCCCCTGTAGTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
CDS-3UTR GCA 90 bp GCTGTAGTCGTGGCCCTGCTTCAGGTCCTGCAGGCCCCGCCAGATGGTCATGCGGGATGCTGGGGAACATaGGGGCCGTTTGTTGGCATT +
Preference number: 4 (lower is better)
Translates to: AVVVALLQVLQAPPDGHAGCWGT*GPFVGI
Trigger: AATGCCAACAAACGGCCCGCATGTTCCCCAGCATCC...CGCATGACCATCTGGCGGGGCCTGCAGGACCTGAAGCAGGGCCACGACTACAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000378280.5
ENST00000378285.5
CDS-3UTR CCA 90 bp CAGAGCGACTTGGACAGATGTGAGCTGACCTGCCTGGCGAGCTCCTTCTGCCTTCAGGGGAGGTGGCGGTaGACTGGGCCATCTTCCCCA +
Preference number: 4 (lower is better)
Translates to: QSDLDRCELTCLASSFCLQGRWR*TGPSSP
Trigger: TGGGGAAGATGGCCCAGTCCACCGCCACCTCCCCTG...AAGGCAGAAGGAGCTCGCCAGGCAGGTCAGCTCACATCTGTCCAAGTCGCTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp CCCCAAGAGATGGGTGTGGTGCCTGGGGCATGGGTCTTAGCCTTTCTGGTCTCACCCCATCAGGGGAGGTaGCGGTGGACTGGGCCATCT +
Preference number: 4 (lower is better)
Translates to: PQEMGVVPGAWVLAFLVSPHQGR*RWTGPS
Trigger: AGATGGCCCAGTCCACCGCCACCTCCCCTGATGGGG...TGAGACCAGAAAGGCTAAGACCCATGCCCCAGGCACCACACCCATCTCTTGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp GCAGAGAGAGTCCCCAGCCCCCGGCGCGGGCAAGACGCAGTTAGGGACATTCCCGAAGTAGGTGCTGTCTaGTTCCAGAGAGCTCCAGAG +
Preference number: 4 (lower is better)
Translates to: AERVPSPRRGQDAVRDIPEVGAV*FQRAPE
Trigger: CTCTGGAGCTCTCTGGAACCAGACAGCACCTACTTC...GGGAATGTCCCTAACTGCGTCTTGCCCGCGCCGGGGGCTGGGGACTCTCTCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp CAGCTGGGGCCATCTGGCTGCTCCGTGTTCTGGCCGGCTTCCTTGGACATCTGGGGAAGACGTCCATGCTaGAATCCGTTCCGCCCACCA +
Preference number: 4 (lower is better)
Translates to: QLGPSGCSVFWPASLDIWGRRPC*NPFRPP
Trigger: TGGTGGGCGGAACGGATTCCAGCATGGACGTCTTCC...CCAGATGTCCAAGGAAGCCGGCCAGAACACGGAGCAGCCAGATGGCCCCAGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp CCTGCACTCTGGGTGGTGTCTCGGCTTGCGTGGGTGAGGGCTCCCATTGGCCCAGTCATGCCCTCCAGGTaGAAGACGTCCATGCTGGAA +
Preference number: 4 (lower is better)
Translates to: PALWVVSRLAWVRAPIGPVMPSR*KTSMLE
Trigger: TTCCAGCATGGACGTCTTCCACCTGGAGGGCATGAC...TGGGCCAATGGGAGCCCTCACCCACGCAAGCCGAGACACCACCCAGAGTGCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp TGCAGTTCCCCTGAGCCGCCGATGGAGATGGTGGCCGCGTTGCTAGAGCGGAGCACATGGTGTCGAAGGTaGAGCTGGGTTGTGCGTAGG +
Preference number: 4 (lower is better)
Translates to: CSSPEPPMEMVAALLERSTWCRR*SWVVRR
Trigger: CCTACGCACAACCCAGCTCCACCTTCGACACCATGT...GCTCCGCTCTAGCAACGCGGCCACCATCTCCATCGGCGGCTCAGGGGAACTGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR CCA 90 bp GCTGTAGTCGTGGCCCTGCTTCAGGTCCTGCAGGCCCCGCCAGATGGTCATGCGACATGGTGTCGAAGGTaGAGCTGGGTTGTGCGTAGG +
Preference number: 4 (lower is better)
Translates to: AVVVALLQVLQAPPDGHATWCRR*SWVVRR
Trigger: CCTACGCACAACCCAGCTCCACCTTCGACACCATGT...CGCATGACCATCTGGCGGGGCCTGCAGGACCTGAAGCAGGGCCACGACTACAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR CCA 90 bp CTACAGGGGCTCTTGGGACAGCCTCACTGGACTCAGGGTGGACAGGTAACGTACCAGGCGCCGGCGACATaGTGTCGAAGGTGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: LQGLLGQPHWTQGGQVTYQAPAT*CRRWSW
Trigger: CCAGCTCCACCTTCGACACCATGTCGCCGGCGCCTG...GTACGTTACCTGTCCACCCTGAGTCCAGTGAGGCTGTCCCAAGAGCCCCTGTAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp TCGTGGCCCTGCTTCAGGTCCTGCAGGCCCCGCCAGATGGTCATGCGGTACTGCGCCGTGCTGGACTGCTaGAAAGTGACCTCAAAGTGG +
Preference number: 4 (lower is better)
Translates to: SWPCFRSCRPRQMVMRYCAVLDC*KVTSKW
Trigger: CCACTTTGAGGTCACTTTCCAGCAGTCCAGCACGGC...GCAGTACCGCATGACCATCTGGCGGGGCCTGCAGGACCTGAAGCAGGGCCACGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR CCA 90 bp GCCAGAGCTTCCTGCCCTTCAGCTGGAAGGAGCCGGAAGGAGCTGGAAGGAAGGTCCACGCGGATGAGGTaGCTGGCTGGAGCAGACTGT +
Preference number: 4 (lower is better)
Translates to: ARASCPSAGRSRKELEGRSTRMR*LAGADC
Trigger: ACAGTCTGCTCCAGCCAGCCACCTCATCCGCGTGGA...CCTTCCTTCCAGCTCCTTCCGGCTCCTTCCAGCTGAAGGGCAGGAAGCTCTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp ATGGCAATAAGATGGAGAGCTGAGGTGACATGCAGCTGGGGTGGCTGCGCCACCTGGCGGCCCCGTTCTTaGCGGAGCTCTCGTTCAGGG +
Preference number: 4 (lower is better)
Translates to: MAIRWRAEVTCSWGGCATWRPRS*RSSRSG
Trigger: CCCTGAACGAGAGCTCCGCCAAGAACGGGGCCGCCA...GGTGGCGCAGCCACCCCAGCTGCATGTCACCTCAGCTCTCCATCTTATTGCCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp TGCAGTTCCCCTGAGCCGCCGATGGAGATGGTGGCCGCGTTGCTAGAGCGGAGCATAGGAGTCCACCAGTaGCTGCGGCACCAACTCCAT +
Preference number: 4 (lower is better)
Translates to: CSSPEPPMEMVAALLERSIGVHQ*LRHQLH
Trigger: ATGGAGTTGGTGCCGCAGCCACTGGTGGACTCCTAT...GCTCCGCTCTAGCAACGCGGCCACCATCTCCATCGGCGGCTCAGGGGAACTGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR CCA 90 bp TCGTGGCCCTGCTTCAGGTCCTGCAGGCCCCGCCAGATGGTCATGCGGTACTGCATAGGAGTCCACCAGTaGCTGCGGCACCAACTCCAT +
Preference number: 4 (lower is better)
Translates to: SWPCFRSCRPRQMVMRYCIGVHQ*LRHQLH
Trigger: ATGGAGTTGGTGCCGCAGCCACTGGTGGACTCCTAT...GCAGTACCGCATGACCATCTGGCGGGGCCTGCAGGACCTGAAGCAGGGCCACGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR CCA 90 bp CTTCAGGAGGTGGCCTCGGGTAGCAGGTGCCCAGCCCCCAAGAGATGGGTGTGGATAGGAGTCCACCAGTaGCTGCGGCACCAACTCCAT +
Preference number: 4 (lower is better)
Translates to: LQEVASGSRCPAPKRWVWIGVHQ*LRHQLH
Trigger: ATGGAGTTGGTGCCGCAGCCACTGGTGGACTCCTAT...CCACACCCATCTCTTGGGGGCTGGGCACCTGCTACCCGAGGCCACCTCCTGAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp CACACTACAGGGGCTCTTGGGACAGCCTCACTGGACTCAGGGTGGACAGGTAACGCCTCCATGACCCGCTaGCGCTGCAGTTCCCCTGAG +
Preference number: 4 (lower is better)
Translates to: HTTGALGTASLDSGWTGNASMTR*RCSSPE
Trigger: CTCAGGGGAACTGCAGCGCCAGCGGGTCATGGAGGC...GTTACCTGTCCACCCTGAGTCCAGTGAGGCTGTCCCAAGAGCCCCTGTAGTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp GCATTCCTGCAGATTTGCCTGGATTTGCCCTTCCTGGGGTTCCCTCTAGGCTTCTGGGTCTCTGGGCGGTaGCGCAGGCTGCAGCCAGGC +
Preference number: 4 (lower is better)
Translates to: AFLQICLDLPFLGFPLGFWVSGR*RRLQPG
Trigger: GCCTGGCTGCAGCCTGCGCCACCGCCCAGAGACCCA...GAAGCCTAGAGGGAACCCCAGGAAGGGCAAATCCAGGCAAATCTGCAGGAATGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp GCTCCGGTTCCCTGCCCTGAAGCTGTGCTCCGGGACGGTCAAGGTTCGGCCACCCTCCTGAGGCAGTTTTaGACACACAGGAAGGAGAGG +
Preference number: 4 (lower is better)
Translates to: APVPCPEAVLRDGQGSATLLRQF*THRKER
Trigger: CCTCTCCTTCCTGTGTGTCCAAAACTGCCTCAGGAG...GGTGGCCGAACCTTGACCGTCCCGGAGCACAGCTTCAGGGCAGGGAACCGGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp GGGCAGGAAGGAGGCGGTCCTGCAGAATACAGCGTGCTGGGGGCAGAGGCCAGTAGGACCTCGCCTGGTTaGGAGATGACAGTCTCTAGG +
Preference number: 4 (lower is better)
Translates to: GQEGGGPAEYSVLGAEASRTSPG*EMTVSR
Trigger: CCTAGAGACTGTCATCTCCCAACCAGGCGAGGTCCT...ACTGGCCTCTGCCCCCAGCACGCTGTATTCTGCAGGACCGCCTCCTTCCTGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp GGCAGGAAGGAGGCGGTCCTGCAGAATACAGCGTGCTGGGGGCAGAGGCCAGTCTGGAAGGACCTCGCCTaGTTGGGAGATGACAGTCTC +
Preference number: 4 (lower is better)
Translates to: GRKEAVLQNTACWGQRPVWKDLA*LGDDSL
Trigger: GAGACTGTCATCTCCCAACCAGGCGAGGTCCTTCCA...GACTGGCCTCTGCCCCCAGCACGCTGTATTCTGCAGGACCGCCTCCTTCCTGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp CTGGAAGTCGGAGCCGACGCTGCGGTCCCCACCCACGCCTGCCATGGAGCACGCTCAGACACAGTCACTTaGCTGCTCACTACTATCCAG +
Preference number: 4 (lower is better)
Translates to: LEVGADAAVPTHACHGARSDTVT*LLTTIQ
Trigger: CTGGATAGTAGTGAGCAGCCAAGTGACTGTGTCTGA...GCGTGCTCCATGGCAGGCGTGGGTGGGGACCGCAGCGTCGGCTCCGACTTCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp GCCAGAGCTTCCTGCCCTTCAGCTGGAAGGAGCCGGAAGGAGCTGGAAGGAAGGCAGAATACAGCGTGCTaGGGGCAGAGGCCAGTCCCA +
Preference number: 4 (lower is better)
Translates to: ARASCPSAGRSRKELEGRQNTAC*GQRPVP
Trigger: TGGGACTGGCCTCTGCCCCCAGCACGCTGTATTCTG...CCTTCCTTCCAGCTCCTTCCGGCTCCTTCCAGCTGAAGGGCAGGAAGCTCTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp GGCCTGGTGGGAACGCTGGGGGAATGGGGGAGAGTCGCTGTTTCTGACCAGAGCTCAGCTTCCTCAGCCTaGCTCATGGGCGCTAGGTTG +
Preference number: 4 (lower is better)
Translates to: GLVGTLGEWGRVAVSDQSSASSA*LMGARL
Trigger: CAACCTAGCGCCCATGAGCCAGGCTGAGGAAGCTGA...GCTCTGGTCAGAAACAGCGACTCTCCCCCATTCCCCCAGCGTTCCCACCAGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp GGCCTGGTGGGAACGCTGGGGGAATGGGGGAGAGTCGCTGTTTCTGACCAGAGCCAAGTCCCGCCCACCTaGCTTCTCACTCAGCTTCCT +
Preference number: 4 (lower is better)
Translates to: GLVGTLGEWGRVAVSDQSQVPPT*LLTQLP
Trigger: AGGAAGCTGAGTGAGAAGCCAGGTGGGCGGGACTTG...GCTCTGGTCAGAAACAGCGACTCTCCCCCATTCCCCCAGCGTTCCCACCAGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp TTTCACAGCTGCTTCTCCAGTGCAAGGAGGCTGCATGGGCTCCCTAGACAGGTGCCCACCCGGCCTTCCTaGGAACAAGTCCCGCCCACC +
Preference number: 4 (lower is better)
Translates to: FHSCFSSARRLHGLPRQVPTRPS*EQVPPT
Trigger: GGTGGGCGGGACTTGTTCCCAGGAAGGCCGGGTGGG...CACCTGTCTAGGGAGCCCATGCAGCCTCCTTGCACTGGAGAAGCAGCTGTGAAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp TCGGGTAGCAGGTGCCCAGCCCCCAAGAGATGGGTGTGGTGCCTGGGGCATGGGTCCTGCAGATTTGCCTaGATTTGCCCTTCCTGGGGT +
Preference number: 4 (lower is better)
Translates to: SGSRCPAPKRWVWCLGHGSCRFA*ICPSWG
Trigger: ACCCCAGGAAGGGCAAATCCAGGCAAATCTGCAGGA...CCCATGCCCCAGGCACCACACCCATCTCTTGGGGGCTGGGCACCTGCTACCCGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp CGCTGCAGTTCCCCTGAGCCGCCGATGGAGATGGTGGCCGCGTTGCTAGAGCGGTCCTGCAGATTTGCCTaGATTTGCCCTTCCTGGGGT +
Preference number: 4 (lower is better)
Translates to: RCSSPEPPMEMVAALLERSCRFA*ICPSWG
Trigger: ACCCCAGGAAGGGCAAATCCAGGCAAATCTGCAGGA...CCGCTCTAGCAACGCGGCCACCATCTCCATCGGCGGCTCAGGGGAACTGCAGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000604074.5
CDS-3UTR CCA 90 bp GGCAGGAAGGAGGCGGTCCTGCAGAATACAGCGTGCTGGGGGCAGAGGCCAGTCGAGGAGCTGCTCCCATaGCAGAGCATTCCTGCAGAT +
Preference number: 4 (lower is better)
Translates to: GRKEAVLQNTACWGQRPVEELLP*QSIPAD
Trigger: ATCTGCAGGAATGCTCTGCCATGGGAGCAGCTCCTC...GACTGGCCTCTGCCCCCAGCACGCTGTATTCTGCAGGACCGCCTCCTTCCTGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp TCAACAAGCCCTCTGGAACTGAAGCACATCTGCGCTGGGCTGAGGAACCCCGGGAGCCTGCACTCTGGGTaGTGTCTCGGCTTGCGTGGG +
Preference number: 4 (lower is better)
Translates to: STSPLELKHICAGLRNPGSLHSG*CLGLRG
Trigger: CCCACGCAAGCCGAGACACCACCCAGAGTGCAGGCT...CCCGGGGTTCCTCAGCCCAGCGCAGATGTGCTTCAGTTCCAGAGGGCTTGTTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp CACACTACAGGGGCTCTTGGGACAGCCTCACTGGACTCAGGGTGGACAGGTAACCCTAGGCAGGGGGTGTaGAGCTGGCCGTGCCAGAAG +
Preference number: 4 (lower is better)
Translates to: HTTGALGTASLDSGWTGNPRQGV*SWPCQK
Trigger: CTTCTGGCACGGCCAGCTCCACACCCCCTGCCTAGG...GTTACCTGTCCACCCTGAGTCCAGTGAGGCTGTCCCAAGAGCCCCTGTAGTGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp TCAACAAGCCCTCTGGAACTGAAGCACATCTGCGCTGGGCTGAGGAACCCCGGGGAAGCACATCTGCGCTaGGCTGAGGAACCCCGGGTG +
Preference number: 4 (lower is better)
Translates to: STSPLELKHICAGLRNPGEAHLR*AEEPRV
Trigger: CACCCGGGGTTCCTCAGCCCAGCGCAGATGTGCTTC...CCCGGGGTTCCTCAGCCCAGCGCAGATGTGCTTCAGTTCCAGAGGGCTTGTTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp CTCCCCACCCGGCCTTCCTGGGAACAAGTCCCGCCCACCTGGCTTCTCACTCAGTTGGGACAGCCTCACTaGACTCAGGGTGGACAGGTA +
Preference number: 4 (lower is better)
Translates to: LPTRPSWEQVPPTWLLTQLGQPH*TQGGQV
Trigger: TACCTGTCCACCCTGAGTCCAGTGAGGCTGTCCCAA...CTGAGTGAGAAGCCAGGTGGGCGGGACTTGTTCCCAGGAAGGCCGGGTGGGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp GTGTCAGGATGGGCCCCCGCGGCTCCTGAAGTGGAACATGGGGGAAGAGTGGGGCAACCCCTGCACTGCTaGGAAAACCATCCGCCTTCA +
Preference number: 4 (lower is better)
Translates to: VSGWAPAAPEVEHGGRVGQPLHC*ENHPPS
Trigger: TGAAGGCGGATGGTTTTCCCAGCAGTGCAGGGGTTG...CCCCACTCTTCCCCCATGTTCCACTTCAGGAGCCGCGGGGGCCCATCCTGACAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp GGCAGGAAGGAGGCGGTCCTGCAGAATACAGCGTGCTGGGGGCAGAGGCCAGTCCAACCCCTGCACTGCTaGGAAAACCATCCGCCTTCA +
Preference number: 4 (lower is better)
Translates to: GRKEAVLQNTACWGQRPVQPLHC*ENHPPS
Trigger: TGAAGGCGGATGGTTTTCCCAGCAGTGCAGGGGTTG...GACTGGCCTCTGCCCCCAGCACGCTGTATTCTGCAGGACCGCCTCCTTCCTGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp GCGGTTGGGGATGGTGATGGTGTGGCGCACGCGGAAGTGCACGGCCTCCATGACCAACCCCTGCACTGCTaGGAAAACCATCCGCCTTCA +
Preference number: 4 (lower is better)
Translates to: AVGDGDGVAHAEVHGLHDQPLHC*ENHPPS
Trigger: TGAAGGCGGATGGTTTTCCCAGCAGTGCAGGGGTTG...GTCATGGAGGCCGTGCACTTCCGCGTGCGCCACACCATCACCATCCCCAACCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000604074.5
CDS-3UTR CCA 90 bp CACACTACAGGGGCTCTTGGGACAGCCTCACTGGACTCAGGGTGGACAGGTAACGCCTGGTGGGAACGCTaGGGGAATGGGGGAGAGTCG +
Preference number: 4 (lower is better)
Translates to: HTTGALGTASLDSGWTGNAWWER*GNGGES
Trigger: CGACTCTCCCCCATTCCCCCAGCGTTCCCACCAGGC...GTTACCTGTCCACCCTGAGTCCAGTGAGGCTGTCCCAAGAGCCCCTGTAGTGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp CACACTACAGGGGCTCTTGGGACAGCCTCACTGGACTCAGGGTGGACAGGTAACCCAGCAGCCCAGGCCTaGTGGGAACGCTGGGGGAAT +
Preference number: 4 (lower is better)
Translates to: HTTGALGTASLDSGWTGNPAAQA*WERWGN
Trigger: ATTCCCCCAGCGTTCCCACCAGGCCTGGGCTGCTGG...GTTACCTGTCCACCCTGAGTCCAGTGAGGCTGTCCCAAGAGCCCCTGTAGTGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp GGCAGGAAGGAGGCGGTCCTGCAGAATACAGCGTGCTGGGGGCAGAGGCCAGTCTTGGCTGGCACTGCGTaGCCATGGTTGTTGAGCATC +
Preference number: 4 (lower is better)
Translates to: GRKEAVLQNTACWGQRPVLAGTA*PWLLSI
Trigger: GATGCTCAACAACCATGGCCACGCAGTGCCAGCCAA...GACTGGCCTCTGCCCCCAGCACGCTGTATTCTGCAGGACCGCCTCCTTCCTGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
CDS-3UTR CCA 90 bp GGACGGTGGGAGAGGGATGCCTGCGTCTTCGTAGACCAGGTACCTGCGGCAACATGCTCATCTCGCCGTTaGCTGGCACTGCGTGGCCAT +
Preference number: 4 (lower is better)
Translates to: GRWERDACVFVDQVPAATCSSRR*LALRGH
Trigger: ATGGCCACGCAGTGCCAGCCAACGGCGAGATGAGCA...TGTTGCCGCAGGTACCTGGTCTACGAAGACGCAGGCATCCCTCTCCCACCGTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
CDS-3UTR CCA 90 bp CCCCAAGAGATGGGTGTGGTGCCTGGGGCATGGGTCTTAGCCTTTCTGGTCTCACCCGAGACCATGGACTaGGCGCTGTGGCTGCTGCTC +
Preference number: 4 (lower is better)
Translates to: PQEMGVVPGAWVLAFLVSPETMD*ALWLLL
Trigger: GAGCAGCAGCCACAGCGCCCAGTCCATGGTCTCGGG...TGAGACCAGAAAGGCTAAGACCCATGCCCCAGGCACCACACCCATCTCTTGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
CDS-3UTR TCA 90 bp AGAGCGGAGCAGCTGCTGCGCGGTGCTGTAGTCGTGGCCCTGCTTCAGGTCCTGATTATTCCCCCGGCTTaGCTGGGGAAGGTCGAAGTA +
Preference number: 4 (lower is better)
Translates to: RAEQLLRGAVVVALLQVLIIPPA*LGKVEV
Trigger: TACTTCGACCTTCCCCAGTCAAGCCGGGGGAATAAT...CAGGACCTGAAGCAGGGCCACGACTACAGCACCGCGCAGCAGCTGCTCCGCTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354437.8
ENST00000604074.5
CDS-3UTR TCA 90 bp CCTGCACTCTGGGTGGTGTCTCGGCTTGCGTGGGTGAGGGCTCCCATTGGCCCAATTATTCCCCCGGCTTaGCTGGGGAAGGTCGAAGTA +
Preference number: 4 (lower is better)
Translates to: PALWVVSRLAWVRAPIGPIIPPA*LGKVEV
Trigger: TACTTCGACCTTCCCCAGTCAAGCCGGGGGAATAAT...TGGGCCAATGGGAGCCCTCACCCACGCAAGCCGAGACACCACCCAGAGTGCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378295.9
ENST00000604074.5
CDS-3UTR TCA 90 bp GCCCTTCCCAGGAGCACACTACAGGGGCTCTTGGGACAGCCTCACTGGACTCAGCAGACTGTCCTTCGTTaGAGTCCCTCCCGAGCTCGT +
Preference number: 4 (lower is better)
Translates to: ALPRSTLQGLLGQPHWTQQTVLR*SPSRAR
Trigger: ACGAGCTCGGGAGGGACTTCAACGAAGGACAGTCTG...CTGAGTCCAGTGAGGCTGTCCCAAGAGCCCCTGTAGTGTGCTCCTGGGAAGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR TCA 90 bp TCCTTGATGGGCTGCTTGCGGGCCTTGCAGTCGGGCAGGTCGAAGCCGAAGTCCTGTACAGGATGGTGGTaGATTCCGTCCCCACCTGTG +
Preference number: 4 (lower is better)
Translates to: SLMGCLRALQSGRSKPKSCTGWW*IPSPPV
Trigger: CACAGGTGGGGACGGAATTCACCACCATCCTGTACA...GGACTTCGGCTTCGACCTGCCCGACTGCAAGGCCCGCAAGCAGCCCATCAAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR TCA 90 bp GGACCTTGCCTTTCCCCGGGCACAGCCCGAAGGTCCTGCCTCCTGAGGCAGTTTTGTACAGGATGGTGGTaGATTCCGTCCCCACCTGTG +
Preference number: 4 (lower is better)
Translates to: GPCLSPGTARRSCLLRQFCTGWW*IPSPPV
Trigger: CACAGGTGGGGACGGAATTCACCACCATCCTGTACA...AAACTGCCTCAGGAGGCAGGACCTTCGGGCTGTGCCCGGGGAAAGGCAAGGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000346387.8
ENST00000354437.8
ENST00000357733.7
ENST00000378280.5
ENST00000378285.5
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR TCA 90 bp TCCTTGATGGGCTGCTTGCGGGCCTTGCAGTCGGGCAGGTCGAAGCCGAAGTCCGAAGGTCCTGCCTCCTaGGGCAGTTTTGGACACACA +
Preference number: 4 (lower is better)
Translates to: SLMGCLRALQSGRSKPKSEGPAS*GSFGHT
Trigger: TGTGTGTCCAAAACTGCCTCAGGAGGCAGGACCTTC...GGACTTCGGCTTCGACCTGCCCGACTGCAAGGCCCGCAAGCAGCCCATCAAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR TCA 90 bp GCTCCGGTTCCCTGCCCTGAAGCTGTGCTCCGGGACGGTCAAGGTTCGGCCACCTCATGGGCGCTAGGTTaGACTCCAAAGAGAATGCTG +
Preference number: 4 (lower is better)
Translates to: APVPCPEAVLRDGQGSATSWALG*TPKRML
Trigger: CAGCATTCTCTTTGGAGTTCAACCTAGCGCCCATGA...GGTGGCCGAACCTTGACCGTCCCGGAGCACAGCTTCAGGGCAGGGAACCGGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR TCA 90 bp GCCCTTCCCAGGAGCACACTACAGGGGCTCTTGGGACAGCCTCACTGGACTCAGTCTGCCTTGCCTCTCTaGGCAGACTCAGGACCACTG +
Preference number: 4 (lower is better)
Translates to: ALPRSTLQGLLGQPHWTQSALPL*ADSGPL
Trigger: CAGTGGTCCTGAGTCTGCTCAGAGAGGCAAGGCAGA...CTGAGTCCAGTGAGGCTGTCCCAAGAGCCCCTGTAGTGTGCTCCTGGGAAGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR TCA 90 bp GGCCTGGTGGGAACGCTGGGGGAATGGGGGAGAGTCGCTGTTTCTGACCAGAGCGAGAGTCGCTGTTTCTaGCCAGAGCGACTTGGACAG +
Preference number: 4 (lower is better)
Translates to: GLVGTLGEWGRVAVSDQSESRCF*PERLGQ
Trigger: CTGTCCAAGTCGCTCTGGTCAGAAACAGCGACTCTC...GCTCTGGTCAGAAACAGCGACTCTCCCCCATTCCCCCAGCGTTCCCACCAGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR TCA 90 bp CTCCCCACCCGGCCTTCCTGGGAACAAGTCCCGCCCACCTGGCTTCTCACTCAGACTGACTGTTCTGAGTaGCAAGTGGCTCTGTGCCAG +
Preference number: 4 (lower is better)
Translates to: LPTRPSWEQVPPTWLLTQTDCSE*QVALCQ
Trigger: CTGGCACAGAGCCACTTGTCACTCAGAACAGTCAGT...CTGAGTGAGAAGCCAGGTGGGCGGGACTTGTTCCCAGGAAGGCCGGGTGGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR TCA 90 bp GCGGTTGGGGATGGTGATGGTGTGGCGCACGCGGAAGTGCACGGCCTCCATGACACTGACTGTTCTGAGTaGCAAGTGGCTCTGTGCCAG +
Preference number: 4 (lower is better)
Translates to: AVGDGDGVAHAEVHGLHDTDCSE*QVALCQ
Trigger: CTGGCACAGAGCCACTTGTCACTCAGAACAGTCAGT...GTCATGGAGGCCGTGCACTTCCGCGTGCGCCACACCATCACCATCCCCAACCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000604074.5
CDS-3UTR TCA 90 bp AGCACACTACAGGGGCTCTTGGGACAGCCTCACTGGACTCAGGGTGGACAGGTAGGCCCACCAGCTGGTTaGCGGAGGGCAGCTTGTTCA +
Preference number: 4 (lower is better)
Translates to: STLQGLLGQPHWTQGGQVGPPAG*RRAACS
Trigger: TGAACAAGCTGCCCTCCGTCAACCAGCTGGTGGGCC...TACCTGTCCACCCTGAGTCCAGTGAGGCTGTCCCAAGAGCCCCTGTAGTGTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378288.8
ENST00000378295.9
CDS-3UTR GCA 90 bp GGAAGGACCTCGCCTGGTTGGGAGATGACAGTCTCTAGGATGAAGCCTGGAAGTCCGAGGCCGCGCGGCTaGTCATCTGGTCCATGGTGC +
Preference number: 4 (lower is better)
Translates to: GRTSPGWEMTVSRMKPGSPRPRG*SSGPWC
Trigger: GCACCATGGACCAGATGAGCAGCCGCGCGGCCTCGG...ACTTCCAGGCTTCATCCTAGAGACTGTCATCTCCCAACCAGGCGAGGTCCTTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp CCTGCACTCTGGGTGGTGTCTCGGCTTGCGTGGGTGAGGGCTCCCATTGGCCCATTGGCCGTGCTGGACTaGTGGAAAGTGACCTCAAAG +
Preference number: 4 (lower is better)
Translates to: PALWVVSRLAWVRAPIGPLAVLD*WKVTSK
Trigger: CTTTGAGGTCACTTTCCAGCAGTCCAGCACGGCCAA...TGGGCCAATGGGAGCCCTCACCCACGCAAGCCGAGACACCACCCAGAGTGCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp GCCGCCGATGGAGATGGTGGCCGCGTTGCTAGAGCGGAGCAGCTGCTGCGCGGTGGGTCATCCACATACTaGGAGAGATTATTGCCTTCC +
Preference number: 4 (lower is better)
Translates to: AADGDGGRVARAEQLLRGGSSTY*ERLLPS
Trigger: GGAAGGCAATAATCTCTCGCAGTATGTGGATGACCC...ACCGCGCAGCAGCTGCTCCGCTCTAGCAACGCGGCCACCATCTCCATCGGCGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR GCA 90 bp GATGGTGTGGCGCACGCGGAAGTGCACGGCCTCCATGACCCGCTGGCGCTGCAGGGGTCATCCACATACTaGGAGAGATTATTGCCTTCC +
Preference number: 4 (lower is better)
Translates to: DGVAHAEVHGLHDPLALQGSSTY*ERLLPS
Trigger: GGAAGGCAATAATCTCTCGCAGTATGTGGATGACCC...CTGCAGCGCCAGCGGGTCATGGAGGCCGTGCACTTCCGCGTGCGCCACACCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR GCA 90 bp CCCCAAGAGATGGGTGTGGTGCCTGGGGCATGGGTCTTAGCCTTTCTGGTCTCATGGGCCGCCGGTTCATaGCCCCTACACAGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: PQEMGVVPGAWVLAFLVSWAAGS*PLHSCC
Trigger: ACAGCAGCTGTGTAGGGGGCATGAACCGGCGGCCCA...TGAGACCAGAAAGGCTAAGACCCATGCCCCAGGCACCACACCCATCTCTTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp AGCACACTACAGGGGCTCTTGGGACAGCCTCACTGGACTCAGGGTGGACAGGTATGGGCCGCCGGTTCATaGCCCCTACACAGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: STLQGLLGQPHWTQGGQVWAAGS*PLHSCC
Trigger: ACAGCAGCTGTGTAGGGGGCATGAACCGGCGGCCCA...TACCTGTCCACCCTGAGTCCAGTGAGGCTGTCCCAAGAGCCCCTGTAGTGTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp TTTCACAGCTGCTTCTCCAGTGCAAGGAGGCTGCATGGGCTCCCTAGACAGGTGCAGGACAGGCGCAGATaGGGCCCTCAAAGGACCGGC +
Preference number: 4 (lower is better)
Translates to: FHSCFSSARRLHGLPRQVQDRRR*GPQRTG
Trigger: GCCGGTCCTTTGAGGGCCGCATCTGCGCCTGTCCTG...CACCTGTCTAGGGAGCCCATGCAGCCTCCTTGCACTGGAGAAGCAGCTGTGAAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp CGAGGCCCTCAGTGGATCTCGGCCTCCGTGAACTCCTCCTTGATGGGCTGCTTGATGGTCATGCGGTACTaGTCGGGGATCTTCAGGGCC +
Preference number: 4 (lower is better)
Translates to: RGPQWISASVNSSLMGCLMVMRY*SGIFRA
Trigger: GGCCCTGAAGATCCCCGAGCAGTACCGCATGACCAT...CAAGCAGCCCATCAAGGAGGAGTTCACGGAGGCCGAGATCCACTGAGGGCCTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR GCA 90 bp GGACGGTGGGAGAGGGATGCCTGCGTCTTCGTAGACCAGGTACCTGCGGCAACAATGGTCATGCGGTACTaGTCGGGGATCTTCAGGGCC +
Preference number: 4 (lower is better)
Translates to: GRWERDACVFVDQVPAATMVMRY*SGIFRA
Trigger: GGCCCTGAAGATCCCCGAGCAGTACCGCATGACCAT...TGTTGCCGCAGGTACCTGGTCTACGAAGACGCAGGCATCCCTCTCCCACCGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp CGAGGCCCTCAGTGGATCTCGGCCTCCGTGAACTCCTCCTTGATGGGCTGCTTGACAGCCCGAAGGTCCTaGCTCCTGAGGCAGTTTTGG +
Preference number: 4 (lower is better)
Translates to: RGPQWISASVNSSLMGCLTARRS*LLRQFW
Trigger: CCAAAACTGCCTCAGGAGGCAGGACCTTCGGGCTGT...CAAGCAGCCCATCAAGGAGGAGTTCACGGAGGCCGAGATCCACTGAGGGCCTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR GCA 90 bp GGGTGTCAGGATGGGCCCCCGCGGCTCCTGAAGTGGAACATGGGGGAAGAGTGGAGATTTGCCTGGATTTaGCCTTCCTGGGGTTCCCTC +
Preference number: 4 (lower is better)
Translates to: GCQDGPPRLLKWNMGEEWRFAWI*PSWGSL
Trigger: GAGGGAACCCCAGGAAGGGCAAATCCAGGCAAATCT...CCACTCTTCCCCCATGTTCCACTTCAGGAGCCGCGGGGGCCCATCCTGACACCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp GCTCCGGTTCCCTGCCCTGAAGCTGTGCTCCGGGACGGTCAAGGTTCGGCCACCAGTCTGTTCCCTGACTaGCACCGCCTAGAAAGGAAA +
Preference number: 4 (lower is better)
Translates to: APVPCPEAVLRDGQGSATSLFPD*HRLERK
Trigger: TTTCCTTTCTAGGCGGTGGCAGTCAGGGAACAGACT...GGTGGCCGAACCTTGACCGTCCCGGAGCACAGCTTCAGGGCAGGGAACCGGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp CTGGAAGTCGGAGCCGACGCTGCGGTCCCCACCCACGCCTGCCATGGAGCACGCCCTGAGGGGCTTAACTaGTTTTTCTGGGAGATGTTA +
Preference number: 4 (lower is better)
Translates to: LEVGADAAVPTHACHGARPEGLN*FFWEML
Trigger: TAACATCTCCCAGAAAAAGCAGTTAAGCCCCTCAGG...GCGTGCTCCATGGCAGGCGTGGGTGGGGACCGCAGCGTCGGCTCCGACTTCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp CCTGGGCCGCCGCGGTTGGGGATGGTGATGGTGTGGCGCACGCGGAAGTGCACGCCTGAGGGGCTTAACTaGTTTTTCTGGGAGATGTTA +
Preference number: 4 (lower is better)
Translates to: PGPPRLGMVMVWRTRKCTPEGLN*FFWEML
Trigger: TAACATCTCCCAGAAAAAGCAGTTAAGCCCCTCAGG...CGTGCACTTCCGCGTGCGCCACACCATCACCATCCCCAACCGCGGCGGCCCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000604074.5
CDS-3UTR GCA 90 bp GGCAGGAAGGAGGCGGTCCTGCAGAATACAGCGTGCTGGGGGCAGAGGCCAGTCTGTCTAACCTTGCTGTaGCCTGAGGGGCTTAACTGC +
Preference number: 4 (lower is better)
Translates to: GRKEAVLQNTACWGQRPVCLTLL*PEGLNC
Trigger: GCAGTTAAGCCCCTCAGGGCACAGCAAGGTTAGACA...GACTGGCCTCTGCCCCCAGCACGCTGTATTCTGCAGGACCGCCTCCTTCCTGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp CACACTACAGGGGCTCTTGGGACAGCCTCACTGGACTCAGGGTGGACAGGTAACGGCTCCCTAGACAGGTaGAGCTGGGGCCATCTGGCT +
Preference number: 4 (lower is better)
Translates to: HTTGALGTASLDSGWTGNGSLDR*SWGHLA
Trigger: AGCCAGATGGCCCCAGCTGCACCTGTCTAGGGAGCC...GTTACCTGTCCACCCTGAGTCCAGTGAGGCTGTCCCAAGAGCCCCTGTAGTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp GGCCACCAAGGCTCAGGCTGCTCCTCGTGGATGGAGGTGGCCCCAGAAAGGGCCGTCTACTTTCACAGCTaGTTCTCCAGTGCAAGGAGG +
Preference number: 4 (lower is better)
Translates to: GHQGSGCSSWMEVAPERAVYFHS*FSSARR
Trigger: CCTCCTTGCACTGGAGAAGCAGCTGTGAAAGTAGAC...GGCCCTTTCTGGGGCCACCTCCATCCACGAGGAGCAGCCTGAGCCTTGGTGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp GGACGGTGGGAGAGGGATGCCTGCGTCTTCGTAGACCAGGTACCTGCGGCAACAAGATGTGAGCTGACCTaGCTGGCGAGCTCCTTCTGC +
Preference number: 4 (lower is better)
Translates to: GRWERDACVFVDQVPAATRCELT*LASSFC
Trigger: GCAGAAGGAGCTCGCCAGGCAGGTCAGCTCACATCT...TGTTGCCGCAGGTACCTGGTCTACGAAGACGCAGGCATCCCTCTCCCACCGTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp TCAACAAGCCCTCTGGAACTGAAGCACATCTGCGCTGGGCTGAGGAACCCCGGGGCCGTTGGCTGGCACTaGGTGGCCATGGTTGTTGAG +
Preference number: 4 (lower is better)
Translates to: STSPLELKHICAGLRNPGAVGWH*VAMVVE
Trigger: CTCAACAACCATGGCCACGCAGTGCCAGCCAACGGC...CCCGGGGTTCCTCAGCCCAGCGCAGATGTGCTTCAGTTCCAGAGGGCTTGTTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
CDS-3UTR GCA 90 bp CCCCAAGAGATGGGTGTGGTGCCTGGGGCATGGGTCTTAGCCTTTCTGGTCTCAACTGGGCGCTGTGGCTaGTGCTCATCTCGCCGTTGG +
Preference number: 4 (lower is better)
Translates to: PQEMGVVPGAWVLAFLVSTGRCG*CSSRRW
Trigger: CCAACGGCGAGATGAGCAGCAGCCACAGCGCCCAGT...TGAGACCAGAAAGGCTAAGACCCATGCCCCAGGCACCACACCCATCTCTTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
CDS-3UTR GCA 90 bp ATGGCAATAAGATGGAGAGCTGAGGTGACATGCAGCTGGGGTGGCTGCGCCACCACTGGGCGCTGTGGCTaGTGCTCATCTCGCCGTTGG +
Preference number: 4 (lower is better)
Translates to: MAIRWRAEVTCSWGGCATTGRCG*CSSRRW
Trigger: CCAACGGCGAGATGAGCAGCAGCCACAGCGCCCAGT...GGTGGCGCAGCCACCCCAGCTGCATGTCACCTCAGCTCTCCATCTTATTGCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
CDS-3UTR GCA 90 bp GGACCTTGCCTTTCCCCGGGCACAGCCCGAAGGTCCTGCCTCCTGAGGCAGTTTGGATGCTGGGGAACATaGGGGCCGTTTGTTGGCATT +
Preference number: 4 (lower is better)
Translates to: GPCLSPGTARRSCLLRQFGCWGT*GPFVGI
Trigger: AATGCCAACAAACGGCCCGCATGTTCCCCAGCATCC...AAACTGCCTCAGGAGGCAGGACCTTCGGGCTGTGCCCGGGGAAAGGCAAGGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000378280.5
ENST00000378285.5
ENST00000378288.8
CDS-3UTR CCA 90 bp CTTGGGTCTCTGGGCGGTGGCGCAGGCTGCAGCCAGGCGAGGCCCTCAGTGGATCTCAGCAGATTGAACTaGGCCATGACAGATGTAGTC +
Preference number: 4 (lower is better)
Translates to: LGSLGGGAGCSQARPSVDLSRLN*AMTDVV
Trigger: GACTACATCTGTCATGGCCCAGTTCAATCTGCTGAG...ATCCACTGAGGGCCTCGCCTGGCTGCAGCCTGCGCCACCGCCCAGAGACCCAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354437.8
ENST00000604074.5
CDS-3UTR CCA 90 bp AGCACACTACAGGGGCTCTTGGGACAGCCTCACTGGACTCAGGGTGGACAGGTAGCGCGGCTGCTCATCTaGTCCATGGTGCTGCTCAGC +
Preference number: 4 (lower is better)
Translates to: STLQGLLGQPHWTQGGQVARLLI*SMVLLS
Trigger: GCTGAGCAGCACCATGGACCAGATGAGCAGCCGCGC...TACCTGTCCACCCTGAGTCCAGTGAGGCTGTCCCAAGAGCCCCTGTAGTGTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp GGCCTGGTGGGAACGCTGGGGGAATGGGGGAGAGTCGCTGTTTCTGACCAGAGCGCCGTGCTGGACTGCTaGAAAGTGACCTCAAAGTGG +
Preference number: 4 (lower is better)
Translates to: GLVGTLGEWGRVAVSDQSAVLDC*KVTSKW
Trigger: CCACTTTGAGGTCACTTTCCAGCAGTCCAGCACGGC...GCTCTGGTCAGAAACAGCGACTCTCCCCCATTCCCCCAGCGTTCCCACCAGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp CACACTACAGGGGCTCTTGGGACAGCCTCACTGGACTCAGGGTGGACAGGTAACGGGAGTACGTCCAGGTaGCTGACTTGGCCGTGCTGG +
Preference number: 4 (lower is better)
Translates to: HTTGALGTASLDSGWTGNGSTSR*LTWPCW
Trigger: CCAGCACGGCCAAGTCAGCCACCTGGACGTACTCCC...GTTACCTGTCCACCCTGAGTCCAGTGAGGCTGTCCCAAGAGCCCCTGTAGTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp GAAGGTGGCCGTGGCAAGGGAGGAGCTGCTCCCATGGCAGAGCATTCCTGCAGATCTTGTAAACAGGCATaGCCCGGATGGCGGTGCCTG +
Preference number: 4 (lower is better)
Translates to: EGGRGKGGAAPMAEHSCRSCKQA*PGWRCL
Trigger: CAGGCACCGCCATCCGGGCCATGCCTGTTTACAAGA...TCTGCAGGAATGCTCTGCCATGGGAGCAGCTCCTCCCTTGCCACGGCCACCTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp CAGAGCGACTTGGACAGATGTGAGCTGACCTGCCTGGCGAGCTCCTTCTGCCTTTCCCTCCCGAGCTCGTaGTTGGGGCAGCGTTTCACG +
Preference number: 4 (lower is better)
Translates to: QSDLDRCELTCLASSFCLSLPSS*LGQRFT
Trigger: CGTGAAACGCTGCCCCAACCACGAGCTCGGGAGGGA...AAGGCAGAAGGAGCTCGCCAGGCAGGTCAGCTCACATCTGTCCAAGTCGCTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp AGCCAGGCGAGGCCCTCAGTGGATCTCGGCCTCCGTGAACTCCTCCTTGATGGGGATGAGGTGGCTGGCTaGAGCAGACTGTCCTTCGTT +
Preference number: 4 (lower is better)
Translates to: SQARPSVDLGLRELLLDGDEVAG*SRLSFV
Trigger: AACGAAGGACAGTCTGCTCCAGCCAGCCACCTCATC...CCCATCAAGGAGGAGTTCACGGAGGCCGAGATCCACTGAGGGCCTCGCCTGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR CCA 90 bp CTACAGGGGCTCTTGGGACAGCCTCACTGGACTCAGGGTGGACAGGTAACGTACCGTCCCCACCTGTGGTaGCTCATAGGGCACCACGAC +
Preference number: 4 (lower is better)
Translates to: LQGLLGQPHWTQGGQVTYRPHLW*LIGHHD
Trigger: GTCGTGGTGCCCTATGAGCCACCACAGGTGGGGACG...GTACGTTACCTGTCCACCCTGAGTCCAGTGAGGCTGTCCCAAGAGCCCCTGTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp CAGCTGGGGCCATCTGGCTGCTCCGTGTTCTGGCCGGCTTCCTTGGACATCTGGATAGGAGTCCACCAGTaGCTGCGGCACCAACTCCAT +
Preference number: 4 (lower is better)
Translates to: QLGPSGCSVFWPASLDIWIGVHQ*LRHQLH
Trigger: ATGGAGTTGGTGCCGCAGCCACTGGTGGACTCCTAT...CCAGATGTCCAAGGAAGCCGGCCAGAACACGGAGCAGCCAGATGGCCCCAGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp CCTGGGCCGCCGCGGTTGGGGATGGTGATGGTGTGGCGCACGCGGAAGTGCACGATGCTCTGTAACCCTTaGGAGGTGAAATACTCGATG +
Preference number: 4 (lower is better)
Translates to: PGPPRLGMVMVWRTRKCTMLCNP*EVKYSM
Trigger: CATCGAGTATTTCACCTCCCAAGGGTTACAGAGCAT...CGTGCACTTCCGCGTGCGCCACACCATCACCATCCCCAACCGCGGCGGCCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378280.5
CDS-3UTR CCA 90 bp ACCTTGCCTTTCCCCGGGCACAGCCCGAAGGTCCTGCCTCCTGAGGCAGTTTTGCCCCCAGGTCCTCAATaGTCAGGTTCTGCAGGTGGT +
Preference number: 4 (lower is better)
Translates to: TLPFPGHSPKVLPPEAVLPPGPQ*SGSAGG
Trigger: ACCACCTGCAGAACCTGACCATTGAGGACCTGGGGG...CAAAACTGCCTCAGGAGGCAGGACCTTCGGGCTGTGCCCGGGGAAAGGCAAGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000346387.8
ENST00000378280.5
ENST00000378288.8
ENST00000378295.9
CDS-3UTR CCA 90 bp CTACAGGGGCTCTTGGGACAGCCTCACTGGACTCAGGGTGGACAGGTAACGTACGGGATGGTGATGGTGTaGCGCACGCGGAAGTGCACG +
Preference number: 4 (lower is better)
Translates to: LQGLLGQPHWTQGGQVTYGMVMV*RTRKCT
Trigger: CGTGCACTTCCGCGTGCGCCACACCATCACCATCCC...GTACGTTACCTGTCCACCCTGAGTCCAGTGAGGCTGTCCCAAGAGCCCCTGTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp CCCCAAGAGATGGGTGTGGTGCCTGGGGCATGGGTCTTAGCCTTTCTGGTCTCAGGGATGGTGATGGTGTaGCGCACGCGGAAGTGCACG +
Preference number: 4 (lower is better)
Translates to: PQEMGVVPGAWVLAFLVSGMVMV*RTRKCT
Trigger: CGTGCACTTCCGCGTGCGCCACACCATCACCATCCC...TGAGACCAGAAAGGCTAAGACCCATGCCCCAGGCACCACACCCATCTCTTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp CAGAGCGACTTGGACAGATGTGAGCTGACCTGCCTGGCGAGCTCCTTCTGCCTTGGGATGGTGATGGTGTaGCGCACGCGGAAGTGCACG +
Preference number: 4 (lower is better)
Translates to: QSDLDRCELTCLASSFCLGMVMV*RTRKCT
Trigger: CGTGCACTTCCGCGTGCGCCACACCATCACCATCCC...AAGGCAGAAGGAGCTCGCCAGGCAGGTCAGCTCACATCTGTCCAAGTCGCTCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp CACACTACAGGGGCTCTTGGGACAGCCTCACTGGACTCAGGGTGGACAGGTAACAGGCGAGGCCCTCAGTaGATCTCGGCCTCCGTGAAC +
Preference number: 4 (lower is better)
Translates to: HTTGALGTASLDSGWTGNRRGPQ*ISASVN
Trigger: GTTCACGGAGGCCGAGATCCACTGAGGGCCTCGCCT...GTTACCTGTCCACCCTGAGTCCAGTGAGGCTGTCCCAAGAGCCCCTGTAGTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp CTCCCCACCCGGCCTTCCTGGGAACAAGTCCCGCCCACCTGGCTTCTCACTCAGCTCCTGAGGCAGTTTTaGACACACAGGAAGGAGAGG +
Preference number: 4 (lower is better)
Translates to: LPTRPSWEQVPPTWLLTQLLRQF*THRKER
Trigger: CCTCTCCTTCCTGTGTGTCCAAAACTGCCTCAGGAG...CTGAGTGAGAAGCCAGGTGGGCGGGACTTGTTCCCAGGAAGGCCGGGTGGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp GGGTGTCAGGATGGGCCCCCGCGGCTCCTGAAGTGGAACATGGGGGAAGAGTGGCTCCTGAGGCAGTTTTaGACACACAGGAAGGAGAGG +
Preference number: 4 (lower is better)
Translates to: GCQDGPPRLLKWNMGEEWLLRQF*THRKER
Trigger: CCTCTCCTTCCTGTGTGTCCAAAACTGCCTCAGGAG...CCACTCTTCCCCCATGTTCCACTTCAGGAGCCGCGGGGGCCCATCCTGACACCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp CCTGCACTCTGGGTGGTGTCTCGGCTTGCGTGGGTGAGGGCTCCCATTGGCCCACTCCTGAGGCAGTTTTaGACACACAGGAAGGAGAGG +
Preference number: 4 (lower is better)
Translates to: PALWVVSRLAWVRAPIGPLLRQF*THRKER
Trigger: CCTCTCCTTCCTGTGTGTCCAAAACTGCCTCAGGAG...TGGGCCAATGGGAGCCCTCACCCACGCAAGCCGAGACACCACCCAGAGTGCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp GTAGTCGTGGCCCTGCTTCAGGTCCTGCAGGCCCCGCCAGATGGTCATGCGGTAAGGACCTCGCCTGGTTaGGAGATGACAGTCTCTAGG +
Preference number: 4 (lower is better)
Translates to: VVVALLQVLQAPPDGHAVRTSPG*EMTVSR
Trigger: CCTAGAGACTGTCATCTCCCAACCAGGCGAGGTCCT...TACCGCATGACCATCTGGCGGGGCCTGCAGGACCTGAAGCAGGGCCACGACTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000604074.5
CDS-3UTR CCA 90 bp GGGTGTCAGGATGGGCCCCCGCGGCTCCTGAAGTGGAACATGGGGGAAGAGTGGGAGGATCCTTTCCTTTaGAAGGACCTCGCCTGGTTG +
Preference number: 4 (lower is better)
Translates to: GCQDGPPRLLKWNMGEEWEDPFL*KDLAWL
Trigger: CAACCAGGCGAGGTCCTTCCAAAGGAAAGGATCCTC...CCACTCTTCCCCCATGTTCCACTTCAGGAGCCGCGGGGGCCCATCCTGACACCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp CTGGAAGTCGGAGCCGACGCTGCGGTCCCCACCCACGCCTGCCATGGAGCACGCATTTCAGCAACACTGTaGTTGTTGTTAGGGGCAGGA +
Preference number: 4 (lower is better)
Translates to: LEVGADAAVPTHACHGARISATL*LLLGAG
Trigger: TCCTGCCCCTAACAACAACCACAGTGTTGCTGAAAT...GCGTGCTCCATGGCAGGCGTGGGTGGGGACCGCAGCGTCGGCTCCGACTTCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp CAGAGCGACTTGGACAGATGTGAGCTGACCTGCCTGGCGAGCTCCTTCTGCCTTCAGGCTGAGGGGCACTaGCTGAGGCGGTACCACATG +
Preference number: 4 (lower is better)
Translates to: QSDLDRCELTCLASSFCLQAEGH*LRRYHM
Trigger: CATGTGGTACCGCCTCAGCCAGTGCCCCTCAGCCTG...AAGGCAGAAGGAGCTCGCCAGGCAGGTCAGCTCACATCTGTCCAAGTCGCTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp CTACAGGGGCTCTTGGGACAGCCTCACTGGACTCAGGGTGGACAGGTAACGTACCAGGCTGAGGGGCACTaGCTGAGGCGGTACCACATG +
Preference number: 4 (lower is better)
Translates to: LQGLLGQPHWTQGGQVTYQAEGH*LRRYHM
Trigger: CATGTGGTACCGCCTCAGCCAGTGCCCCTCAGCCTG...GTACGTTACCTGTCCACCCTGAGTCCAGTGAGGCTGTCCCAAGAGCCCCTGTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp GCCCTTCCCAGGAGCACACTACAGGGGCTCTTGGGACAGCCTCACTGGACTCAGCAAGTCCCGCCCACCTaGCTTCTCACTCAGCTTCCT +
Preference number: 4 (lower is better)
Translates to: ALPRSTLQGLLGQPHWTQQVPPT*LLTQLP
Trigger: AGGAAGCTGAGTGAGAAGCCAGGTGGGCGGGACTTG...CTGAGTCCAGTGAGGCTGTCCCAAGAGCCCCTGTAGTGTGCTCCTGGGAAGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp GGGCAGGAAGGAGGCGGTCCTGCAGAATACAGCGTGCTGGGGGCAGAGGCCAGTTCCTGCAGATTTGCCTaGATTTGCCCTTCCTGGGGT +
Preference number: 4 (lower is better)
Translates to: GQEGGGPAEYSVLGAEASSCRFA*ICPSWG
Trigger: ACCCCAGGAAGGGCAAATCCAGGCAAATCTGCAGGA...ACTGGCCTCTGCCCCCAGCACGCTGTATTCTGCAGGACCGCCTCCTTCCTGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp CACACTACAGGGGCTCTTGGGACAGCCTCACTGGACTCAGGGTGGACAGGTAACGCTGCTCCTCGTGGATaGAGGTGGCCCCAGAAAGGG +
Preference number: 4 (lower is better)
Translates to: HTTGALGTASLDSGWTGNAAPRG*RWPQKG
Trigger: CCCTTTCTGGGGCCACCTCCATCCACGAGGAGCAGC...GTTACCTGTCCACCCTGAGTCCAGTGAGGCTGTCCCAAGAGCCCCTGTAGTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp CCGCCGCCTGGGCCGCCGCGGTTGGGGATGGTGATGGTGTGGCGCACGCGGAAGCTTAACTGCTTTTTCTaGGAGATGTTAGTAGGGGAA +
Preference number: 4 (lower is better)
Translates to: PPPGPPRLGMVMVWRTRKLNCFF*EMLVGE
Trigger: TTCCCCTACTAACATCTCCCAGAAAAAGCAGTTAAG...CTTCCGCGTGCGCCACACCATCACCATCCCCAACCGCGGCGGCCCAGGCGGCGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000604074.5
CDS-3UTR CCA 90 bp AGCCAGGCGAGGCCCTCAGTGGATCTCGGCCTCCGTGAACTCCTCCTTGATGGGGTCCTGATCTGGGGATaGGGGCTGTGTCTAACCTTG +
Preference number: 4 (lower is better)
Translates to: SQARPSVDLGLRELLLDGVLIWG*GLCLTL
Trigger: CAAGGTTAGACACAGCCCCCATCCCCAGATCAGGAC...CCCATCAAGGAGGAGTTCACGGAGGCCGAGATCCACTGAGGGCCTCGCCTGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000604074.5
CDS-3UTR CCA 90 bp GGCGGTGGCGCAGGCTGCAGCCAGGCGAGGCCCTCAGTGGATCTCGGCCTCCGTAAAATGGCAATAAGATaGAGAGCTGAGGTGACATGC +
Preference number: 4 (lower is better)
Translates to: GGGAGCSQARPSVDLGLRKMAIR*RAEVTC
Trigger: GCATGTCACCTCAGCTCTCCATCTTATTGCCATTTT...ACGGAGGCCGAGATCCACTGAGGGCCTCGCCTGGCTGCAGCCTGCGCCACCGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000604074.5
CDS-3UTR CCA 90 bp CACACTACAGGGGCTCTTGGGACAGCCTCACTGGACTCAGGGTGGACAGGTAACGAAGCACATCTGCGCTaGGCTGAGGAACCCCGGGTG +
Preference number: 4 (lower is better)
Translates to: HTTGALGTASLDSGWTGNEAHLR*AEEPRV
Trigger: CACCCGGGGTTCCTCAGCCCAGCGCAGATGTGCTTC...GTTACCTGTCCACCCTGAGTCCAGTGAGGCTGTCCCAAGAGCCCCTGTAGTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp TTTCACAGCTGCTTCTCCAGTGCAAGGAGGCTGCATGGGCTCCCTAGACAGGTGCCAGCAGCCCAGGCCTaGTGGGAACGCTGGGGGAAT +
Preference number: 4 (lower is better)
Translates to: FHSCFSSARRLHGLPRQVPAAQA*WERWGN
Trigger: ATTCCCCCAGCGTTCCCACCAGGCCTGGGCTGCTGG...CACCTGTCTAGGGAGCCCATGCAGCCTCCTTGCACTGGAGAAGCAGCTGTGAAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp CCCATTGGCCCACCTGCCTGCAATGAAGGGCCTCGTCACACCCGTGAGGCCCCCGTTCTGAGTGACAAGTaGCTCTGTGCCAGGATACTG +
Preference number: 4 (lower is better)
Translates to: PIGPPACNEGPRHTREAPVLSDK*LCARIL
Trigger: CAGTATCCTGGCACAGAGCCACTTGTCACTCAGAAC...GGGGGCCTCACGGGTGTGACGAGGCCCTTCATTGCAGGCAGGTGGGCCAATGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp CACACTACAGGGGCTCTTGGGACAGCCTCACTGGACTCAGGGTGGACAGGTAACGGCACTGCGTGGCCATaGTTGTTGAGCATCCCGGGG +
Preference number: 4 (lower is better)
Translates to: HTTGALGTASLDSGWTGNGTAWP*LLSIPG
Trigger: CCCCGGGATGCTCAACAACCATGGCCACGCAGTGCC...GTTACCTGTCCACCCTGAGTCCAGTGAGGCTGTCCCAAGAGCCCCTGTAGTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
CDS-3UTR CCA 90 bp GCTGCGCGGTGCTGTAGTCGTGGCCCTGCTTCAGGTCCTGCAGGCCCCGCCAGAATGCGGGCCGTTTGTTaGCATTTTCGCTTTTCCCAT +
Preference number: 4 (lower is better)
Translates to: AARCCSRGPASGPAGPARMRAVC*HFRFSH
Trigger: ATGGGAAAAGCGAAAATGCCAACAAACGGCCCGCAT...TCTGGCGGGGCCTGCAGGACCTGAAGCAGGGCCACGACTACAGCACCGCGCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000378280.5
ENST00000378285.5
CDS-3UTR TCA 90 bp ACCTTGCCTTTCCCCGGGCACAGCCCGAAGGTCCTGCCTCCTGAGGCAGTTTTGTGGACTGCTGGAAAGTaGCCTCAAAGTGGTGGGGTC +
Preference number: 4 (lower is better)
Translates to: TLPFPGHSPKVLPPEAVLWTAGK*PQSGGV
Trigger: GACCCCACCACTTTGAGGTCACTTTCCAGCAGTCCA...CAAAACTGCCTCAGGAGGCAGGACCTTCGGGCTGTGCCCGGGGAAAGGCAAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000346387.8
ENST00000354437.8
ENST00000357733.7
ENST00000378280.5
ENST00000378285.5
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR TCA 90 bp GAAGGTGGCCGTGGCAAGGGAGGAGCTGCTCCCATGGCAGAGCATTCCTGCAGATGTACAGGATGGTGGTaGATTCCGTCCCCACCTGTG +
Preference number: 4 (lower is better)
Translates to: EGGRGKGGAAPMAEHSCRCTGWW*IPSPPV
Trigger: CACAGGTGGGGACGGAATTCACCACCATCCTGTACA...TCTGCAGGAATGCTCTGCCATGGGAGCAGCTCCTCCCTTGCCACGGCCACCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR TCA 90 bp GCCCTTCCCAGGAGCACACTACAGGGGCTCTTGGGACAGCCTCACTGGACTCAGTGTACAGGATGGTGGTaGATTCCGTCCCCACCTGTG +
Preference number: 4 (lower is better)
Translates to: ALPRSTLQGLLGQPHWTQCTGWW*IPSPPV
Trigger: CACAGGTGGGGACGGAATTCACCACCATCCTGTACA...CTGAGTCCAGTGAGGCTGTCCCAAGAGCCCCTGTAGTGTGCTCCTGGGAAGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR TCA 90 bp TCGGGTAGCAGGTGCCCAGCCCCCAAGAGATGGGTGTGGTGCCTGGGGCATGGGGTAACCCTTGGGAGGTaGAATACTCGATGCAGTTTG +
Preference number: 4 (lower is better)
Translates to: SGSRCPAPKRWVWCLGHGVTLGR*NTRCSL
Trigger: CAAACTGCATCGAGTATTTCACCTCCCAAGGGTTAC...CCCATGCCCCAGGCACCACACCCATCTCTTGGGGGCTGGGCACCTGCTACCCGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000346387.8
ENST00000378288.8
ENST00000378295.9
CDS-3UTR TCA 90 bp GGAAGGACCTCGCCTGGTTGGGAGATGACAGTCTCTAGGATGAAGCCTGGAAGTGCGCTGCAGTTCCCCTaGGCCGCCGATGGAGATGGT +
Preference number: 4 (lower is better)
Translates to: GRTSPGWEMTVSRMKPGSALQFP*AADGDG
Trigger: ACCATCTCCATCGGCGGCTCAGGGGAACTGCAGCGC...ACTTCCAGGCTTCATCCTAGAGACTGTCATCTCCCAACCAGGCGAGGTCCTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR TCA 90 bp CCTGCACTCTGGGTGGTGTCTCGGCTTGCGTGGGTGAGGGCTCCCATTGGCCCATCATGGGCGCTAGGTTaGACTCCAAAGAGAATGCTG +
Preference number: 4 (lower is better)
Translates to: PALWVVSRLAWVRAPIGPSWALG*TPKRML
Trigger: CAGCATTCTCTTTGGAGTTCAACCTAGCGCCCATGA...TGGGCCAATGGGAGCCCTCACCCACGCAAGCCGAGACACCACCCAGAGTGCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR TCA 90 bp CAGCTGGGGCCATCTGGCTGCTCCGTGTTCTGGCCGGCTTCCTTGGACATCTGGAATAAGATGGAGAGCTaGGGTGACATGCAGCTGGGG +
Preference number: 4 (lower is better)
Translates to: QLGPSGCSVFWPASLDIWNKMES*GDMQLG
Trigger: CCCCAGCTGCATGTCACCTCAGCTCTCCATCTTATT...CCAGATGTCCAAGGAAGCCGGCCAGAACACGGAGCAGCCAGATGGCCCCAGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR TCA 90 bp GGAAGGACCTCGCCTGGTTGGGAGATGACAGTCTCTAGGATGAAGCCTGGAAGTACATCTGCGCTGGGCTaGGGAACCCCGGGTGTCAGG +
Preference number: 4 (lower is better)
Translates to: GRTSPGWEMTVSRMKPGSTSALG*GTPGVR
Trigger: CCTGACACCCGGGGTTCCTCAGCCCAGCGCAGATGT...ACTTCCAGGCTTCATCCTAGAGACTGTCATCTCCCAACCAGGCGAGGTCCTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR TCA 90 bp CAGAGCGACTTGGACAGATGTGAGCTGACCTGCCTGGCGAGCTCCTTCTGCCTTCAAGCCCTCTGGAACTaGAGCACATCTGCGCTGGGC +
Preference number: 4 (lower is better)
Translates to: QSDLDRCELTCLASSFCLQALWN*STSALG
Trigger: GCCCAGCGCAGATGTGCTTCAGTTCCAGAGGGCTTG...AAGGCAGAAGGAGCTCGCCAGGCAGGTCAGCTCACATCTGTCCAAGTCGCTCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR TCA 90 bp ATGGCAATAAGATGGAGAGCTGAGGTGACATGCAGCTGGGGTGGCTGCGCCACCCAAGCCCTCTGGAACTaGAGCACATCTGCGCTGGGC +
Preference number: 4 (lower is better)
Translates to: MAIRWRAEVTCSWGGCATQALWN*STSALG
Trigger: GCCCAGCGCAGATGTGCTTCAGTTCCAGAGGGCTTG...GGTGGCGCAGCCACCCCAGCTGCATGTCACCTCAGCTCTCCATCTTATTGCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR TCA 90 bp ACCTTGCCTTTCCCCGGGCACAGCCCGAAGGTCCTGCCTCCTGAGGCAGTTTTGGAGAGTCGCTGTTTCTaGCCAGAGCGACTTGGACAG +
Preference number: 4 (lower is better)
Translates to: TLPFPGHSPKVLPPEAVLESRCF*PERLGQ
Trigger: CTGTCCAAGTCGCTCTGGTCAGAAACAGCGACTCTC...CAAAACTGCCTCAGGAGGCAGGACCTTCGGGCTGTGCCCGGGGAAAGGCAAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp TGTAGTCGTGGCCCTGCTTCAGGTCCTGCAGGCCCCGCCAGATGGTCATGCGGTTTGGCCGTGCTGGACTaGTGGAAAGTGACCTCAAAG +
Preference number: 4 (lower is better)
Translates to: CSRGPASGPAGPARWSCGLAVLD*WKVTSK
Trigger: CTTTGAGGTCACTTTCCAGCAGTCCAGCACGGCCAA...ACCGCATGACCATCTGGCGGGGCCTGCAGGACCTGAAGCAGGGCCACGACTACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR GCA 90 bp GGGGATGGTGATGGTGTGGCGCACGCGGAAGTGCACGGCCTCCATGACCCGCTGGGGTCATCCACATACTaGGAGAGATTATTGCCTTCC +
Preference number: 4 (lower is better)
Translates to: GDGDGVAHAEVHGLHDPLGSSTY*ERLLPS
Trigger: GGAAGGCAATAATCTCTCGCAGTATGTGGATGACCC...CAGCGGGTCATGGAGGCCGTGCACTTCCGCGTGCGCCACACCATCACCATCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR GCA 90 bp CCCCAAGAGATGGGTGTGGTGCCTGGGGCATGGGTCTTAGCCTTTCTGGTCTCAGAGTCCACCAGTGGCTaGGGCACCAACTCCATCAGC +
Preference number: 4 (lower is better)
Translates to: PQEMGVVPGAWVLAFLVSESTSG*GTNSIS
Trigger: GCTGATGGAGTTGGTGCCGCAGCCACTGGTGGACTC...TGAGACCAGAAAGGCTAAGACCCATGCCCCAGGCACCACACCCATCTCTTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp GCATTCCTGCAGATTTGCCTGGATTTGCCCTTCCTGGGGTTCCCTCTAGGCTTCGCAGCTGCTGCGCGGTaGTGTAGTCGTGGCCCTGCT +
Preference number: 4 (lower is better)
Translates to: AFLQICLDLPFLGFPLGFAAAAR*CSRGPA
Trigger: AGCAGGGCCACGACTACAGCACCGCGCAGCAGCTGC...GAAGCCTAGAGGGAACCCCAGGAAGGGCAAATCCAGGCAAATCTGCAGGAATGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp CAGAGCGACTTGGACAGATGTGAGCTGACCTGCCTGGCGAGCTCCTTCTGCCTTTCCTCCTTGATGGGCTaGTTGCGGGCCTTGCAGTCG +
Preference number: 4 (lower is better)
Translates to: QSDLDRCELTCLASSFCLSSLMG*LRALQS
Trigger: CGACTGCAAGGCCCGCAAGCAGCCCATCAAGGAGGA...AAGGCAGAAGGAGCTCGCCAGGCAGGTCAGCTCACATCTGTCCAAGTCGCTCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp GGCCACCAAGGCTCAGGCTGCTCCTCGTGGATGGAGGTGGCCCCAGAAAGGGCCACACAGTCACTTGGCTaGTCACTACTATCCAGAACC +
Preference number: 4 (lower is better)
Translates to: GHQGSGCSSWMEVAPERATQSLG*SLLSRT
Trigger: GGTTCTGGATAGTAGTGAGCAGCCAAGTGACTGTGT...GGCCCTTTCTGGGGCCACCTCCATCCACGAGGAGCAGCCTGAGCCTTGGTGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp CACACTACAGGGGCTCTTGGGACAGCCTCACTGGACTCAGGGTGGACAGGTAACGGAAGGAGGCGGTCCTaGAGAATACAGCGTGCTGGG +
Preference number: 4 (lower is better)
Translates to: HTTGALGTASLDSGWTGNGRRRS*RIQRAG
Trigger: CCCAGCACGCTGTATTCTGCAGGACCGCCTCCTTCC...GTTACCTGTCCACCCTGAGTCCAGTGAGGCTGTCCCAAGAGCCCCTGTAGTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp AGCACACTACAGGGGCTCTTGGGACAGCCTCACTGGACTCAGGGTGGACAGGTAGGAAGGAGGCGGTCCTaGAGAATACAGCGTGCTGGG +
Preference number: 4 (lower is better)
Translates to: STLQGLLGQPHWTQGGQVGRRRS*RIQRAG
Trigger: CCCAGCACGCTGTATTCTGCAGGACCGCCTCCTTCC...TACCTGTCCACCCTGAGTCCAGTGAGGCTGTCCCAAGAGCCCCTGTAGTGTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp TCGGGTAGCAGGTGCCCAGCCCCCAAGAGATGGGTGTGGTGCCTGGGGCATGGGATGGCAGAGCATTCCTaGAGATTTGCCTGGATTTGC +
Preference number: 4 (lower is better)
Translates to: SGSRCPAPKRWVWCLGHGMAEHS*RFAWIC
Trigger: GCAAATCCAGGCAAATCTGCAGGAATGCTCTGCCAT...CCCATGCCCCAGGCACCACACCCATCTCTTGGGGGCTGGGCACCTGCTACCCGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp CTTCAGGAGGTGGCCTCGGGTAGCAGGTGCCCAGCCCCCAAGAGATGGGTGTGGAGTCTGTTCCCTGACTaGCACCGCCTAGAAAGGAAA +
Preference number: 4 (lower is better)
Translates to: LQEVASGSRCPAPKRWVWSLFPD*HRLERK
Trigger: TTTCCTTTCTAGGCGGTGGCAGTCAGGGAACAGACT...CCACACCCATCTCTTGGGGGCTGGGCACCTGCTACCCGAGGCCACCTCCTGAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp CTACAGGGGCTCTTGGGACAGCCTCACTGGACTCAGGGTGGACAGGTAACGTACCACCAAGGCTCAGGCTaGTCCTCGTGGATGGAGGTG +
Preference number: 4 (lower is better)
Translates to: LQGLLGQPHWTQGGQVTYHQGSG*SSWMEV
Trigger: CACCTCCATCCACGAGGAGCAGCCTGAGCCTTGGTG...GTACGTTACCTGTCCACCCTGAGTCCAGTGAGGCTGTCCCAAGAGCCCCTGTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp AGCACACTACAGGGGCTCTTGGGACAGCCTCACTGGACTCAGGGTGGACAGGTACCTGCCCTGAAGCTGTaGTCCGGGACGGTCAAGGTT +
Preference number: 4 (lower is better)
Translates to: STLQGLLGQPHWTQGGQVPALKL*SGTVKV
Trigger: AACCTTGACCGTCCCGGAGCACAGCTTCAGGGCAGG...TACCTGTCCACCCTGAGTCCAGTGAGGCTGTCCCAAGAGCCCCTGTAGTGTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp GGACGGTGGGAGAGGGATGCCTGCGTCTTCGTAGACCAGGTACCTGCGGCAACATGGGAGAGGGATGCCTaGGTCTTCGTAGACCAGGTA +
Preference number: 4 (lower is better)
Translates to: GRWERDACVFVDQVPAATWERDA*VFVDQV
Trigger: TACCTGGTCTACGAAGACGCAGGCATCCCTCTCCCA...TGTTGCCGCAGGTACCTGGTCTACGAAGACGCAGGCATCCCTCTCCCACCGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp GCATTCCTGCAGATTTGCCTGGATTTGCCCTTCCTGGGGTTCCCTCTAGGCTTCCTGGGGCCATCTGGCTaGTCCGTGTTCTGGCCGGCT +
Preference number: 4 (lower is better)
Translates to: AFLQICLDLPFLGFPLGFLGPSG*SVFWPA
Trigger: AGCCGGCCAGAACACGGAGCAGCCAGATGGCCCCAG...GAAGCCTAGAGGGAACCCCAGGAAGGGCAAATCCAGGCAAATCTGCAGGAATGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp TTTCACAGCTGCTTCTCCAGTGCAAGGAGGCTGCATGGGCTCCCTAGACAGGTGGGCTCCCTAGACAGGTaGAGCTGGGGCCATCTGGCT +
Preference number: 4 (lower is better)
Translates to: FHSCFSSARRLHGLPRQVGSLDR*SWGHLA
Trigger: AGCCAGATGGCCCCAGCTGCACCTGTCTAGGGAGCC...CACCTGTCTAGGGAGCCCATGCAGCCTCCTTGCACTGGAGAAGCAGCTGTGAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp CTCCCCACCCGGCCTTCCTGGGAACAAGTCCCGCCCACCTGGCTTCTCACTCAGGTCTACTTTCACAGCTaGTTCTCCAGTGCAAGGAGG +
Preference number: 4 (lower is better)
Translates to: LPTRPSWEQVPPTWLLTQVYFHS*FSSARR
Trigger: CCTCCTTGCACTGGAGAAGCAGCTGTGAAAGTAGAC...CTGAGTGAGAAGCCAGGTGGGCGGGACTTGTTCCCAGGAAGGCCGGGTGGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp GTGCTCCGGGACGGTCAAGGTTCGGCCACCAAGGCTCAGGCTGCTCCTCGTGGAGTCTACTTTCACAGCTaGTTCTCCAGTGCAAGGAGG +
Preference number: 4 (lower is better)
Translates to: VLRDGQGSATKAQAAPRGVYFHS*FSSARR
Trigger: CCTCCTTGCACTGGAGAAGCAGCTGTGAAAGTAGAC...TCCACGAGGAGCAGCCTGAGCCTTGGTGGCCGAACCTTGACCGTCCCGGAGCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp GAAGGTGGCCGTGGCAAGGGAGGAGCTGCTCCCATGGCAGAGCATTCCTGCAGAGAGCTCCTTCTGCCTTaGCTCTCTGAGCAGACTCAG +
Preference number: 4 (lower is better)
Translates to: EGGRGKGGAAPMAEHSCRELLLP*LSEQTQ
Trigger: CTGAGTCTGCTCAGAGAGGCAAGGCAGAAGGAGCTC...TCTGCAGGAATGCTCTGCCATGGGAGCAGCTCCTCCCTTGCCACGGCCACCTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp GCCAGAGCTTCCTGCCCTTCAGCTGGAAGGAGCCGGAAGGAGCTGGAAGGAAGGGAGCTCCTTCTGCCTTaGCTCTCTGAGCAGACTCAG +
Preference number: 4 (lower is better)
Translates to: ARASCPSAGRSRKELEGRELLLP*LSEQTQ
Trigger: CTGAGTCTGCTCAGAGAGGCAAGGCAGAAGGAGCTC...CCTTCCTTCCAGCTCCTTCCGGCTCCTTCCAGCTGAAGGGCAGGAAGCTCTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp CCCCAAGAGATGGGTGTGGTGCCTGGGGCATGGGTCTTAGCCTTTCTGGTCTCATCTGTGCCAGGATACTaGGGGTCGGGCTCCTGGGTA +
Preference number: 4 (lower is better)
Translates to: PQEMGVVPGAWVLAFLVSSVPGY*GSGSWV
Trigger: TACCCAGGAGCCCGACCCGCAGTATCCTGGCACAGA...TGAGACCAGAAAGGCTAAGACCCATGCCCCAGGCACCACACCCATCTCTTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp CACACTACAGGGGCTCTTGGGACAGCCTCACTGGACTCAGGGTGGACAGGTAACTCTGTGCCAGGATACTaGGGGTCGGGCTCCTGGGTA +
Preference number: 4 (lower is better)
Translates to: HTTGALGTASLDSGWTGNSVPGY*GSGSWV
Trigger: TACCCAGGAGCCCGACCCGCAGTATCCTGGCACAGA...GTTACCTGTCCACCCTGAGTCCAGTGAGGCTGTCCCAAGAGCCCCTGTAGTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp GCTCCGGTTCCCTGCCCTGAAGCTGTGCTCCGGGACGGTCAAGGTTCGGCCACCAGGAGTGGATGTTTGTaGGTTGGAGACACTGACTGT +
Preference number: 4 (lower is better)
Translates to: APVPCPEAVLRDGQGSATRSGCL*VGDTDC
Trigger: ACAGTCAGTGTCTCCAACGCACAAACATCCACTCCT...GGTGGCCGAACCTTGACCGTCCCGGAGCACAGCTTCAGGGCAGGGAACCGGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp ATGGTGATGGTGTGGCGCACGCGGAAGTGCACGGCCTCCATGACCCGCTGGCGCAGGAGTGGATGTTTGTaGGTTGGAGACACTGACTGT +
Preference number: 4 (lower is better)
Translates to: MVMVWRTRKCTASMTRWRRSGCL*VGDTDC
Trigger: ACAGTCAGTGTCTCCAACGCACAAACATCCACTCCT...GCGCCAGCGGGTCATGGAGGCCGTGCACTTCCGCGTGCGCCACACCATCACCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604074.5
CDS-3UTR GCA 90 bp ATGGCAATAAGATGGAGAGCTGAGGTGACATGCAGCTGGGGTGGCTGCGCCACCGCCGTTGGCTGGCACTaGGTGGCCATGGTTGTTGAG +
Preference number: 4 (lower is better)
Translates to: MAIRWRAEVTCSWGGCATAVGWH*VAMVVE
Trigger: CTCAACAACCATGGCCACGCAGTGCCAGCCAACGGC...GGTGGCGCAGCCACCCCAGCTGCATGTCACCTCAGCTCTCCATCTTATTGCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
CDS-3UTR GCA 90 bp CACACTACAGGGGCTCTTGGGACAGCCTCACTGGACTCAGGGTGGACAGGTAACGCCGTTGGCTGGCACTaGGTGGCCATGGTTGTTGAG +
Preference number: 4 (lower is better)
Translates to: HTTGALGTASLDSGWTGNAVGWH*VAMVVE
Trigger: CTCAACAACCATGGCCACGCAGTGCCAGCCAACGGC...GTTACCTGTCCACCCTGAGTCCAGTGAGGCTGTCCCAAGAGCCCCTGTAGTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
CDS-3UTR CCA 90 bp GGAAGGACCTCGCCTGGTTGGGAGATGACAGTCTCTAGGATGAAGCCTGGAAGTCAGGGGAGGTGGCGGTaGACTGGGCCATCTTCCCCA +
Preference number: 4 (lower is better)
Translates to: GRTSPGWEMTVSRMKPGSQGRWR*TGPSSP
Trigger: TGGGGAAGATGGCCCAGTCCACCGCCACCTCCCCTG...ACTTCCAGGCTTCATCCTAGAGACTGTCATCTCCCAACCAGGCGAGGTCCTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp TCCTTGATGGGCTGCTTGCGGGCCTTGCAGTCGGGCAGGTCGAAGCCGAAGTCCGAAGTAGGTGCTGTCTaGTTCCAGAGAGCTCCAGAG +
Preference number: 4 (lower is better)
Translates to: SLMGCLRALQSGRSKPKSEVGAV*FQRAPE
Trigger: CTCTGGAGCTCTCTGGAACCAGACAGCACCTACTTC...GGACTTCGGCTTCGACCTGCCCGACTGCAAGGCCCGCAAGCAGCCCATCAAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354437.8
ENST00000604074.5
CDS-3UTR CCA 90 bp TTTCACAGCTGCTTCTCCAGTGCAAGGAGGCTGCATGGGCTCCCTAGACAGGTGGCGCGGCTGCTCATCTaGTCCATGGTGCTGCTCAGC +
Preference number: 4 (lower is better)
Translates to: FHSCFSSARRLHGLPRQVARLLI*SMVLLS
Trigger: GCTGAGCAGCACCATGGACCAGATGAGCAGCCGCGC...CACCTGTCTAGGGAGCCCATGCAGCCTCCTTGCACTGGAGAAGCAGCTGTGAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp GGAAGGACCTCGCCTGGTTGGGAGATGACAGTCTCTAGGATGAAGCCTGGAAGTCAGGCGCCGGCGACATaGTGTCGAAGGTGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: GRTSPGWEMTVSRMKPGSQAPAT*CRRWSW
Trigger: CCAGCTCCACCTTCGACACCATGTCGCCGGCGCCTG...ACTTCCAGGCTTCATCCTAGAGACTGTCATCTCCCAACCAGGCGAGGTCCTTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp GCCAGAGCTTCCTGCCCTTCAGCTGGAAGGAGCCGGAAGGAGCTGGAAGGAAGGGCCGTGCTGGACTGCTaGAAAGTGACCTCAAAGTGG +
Preference number: 4 (lower is better)
Translates to: ARASCPSAGRSRKELEGRAVLDC*KVTSKW
Trigger: CCACTTTGAGGTCACTTTCCAGCAGTCCAGCACGGC...CCTTCCTTCCAGCTCCTTCCGGCTCCTTCCAGCTGAAGGGCAGGAAGCTCTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp TTTCACAGCTGCTTCTCCAGTGCAAGGAGGCTGCATGGGCTCCCTAGACAGGTGTCCCTCCCGAGCTCGTaGTTGGGGCAGCGTTTCACG +
Preference number: 4 (lower is better)
Translates to: FHSCFSSARRLHGLPRQVSLPSS*LGQRFT
Trigger: CGTGAAACGCTGCCCCAACCACGAGCTCGGGAGGGA...CACCTGTCTAGGGAGCCCATGCAGCCTCCTTGCACTGGAGAAGCAGCTGTGAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp ATGGCAATAAGATGGAGAGCTGAGGTGACATGCAGCTGGGGTGGCTGCGCCACCTCCACGCGGATGAGGTaGCTGGCTGGAGCAGACTGT +
Preference number: 4 (lower is better)
Translates to: MAIRWRAEVTCSWGGCATSTRMR*LAGADC
Trigger: ACAGTCTGCTCCAGCCAGCCACCTCATCCGCGTGGA...GGTGGCGCAGCCACCCCAGCTGCATGTCACCTCAGCTCTCCATCTTATTGCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp GGAAGGACCTCGCCTGGTTGGGAGATGACAGTCTCTAGGATGAAGCCTGGAAGTGCAGGCCCCGCCAGATaGTCATGCGGTACTGCTCGG +
Preference number: 4 (lower is better)
Translates to: GRTSPGWEMTVSRMKPGSAGPAR*SCGTAR
Trigger: CCGAGCAGTACCGCATGACCATCTGGCGGGGCCTGC...ACTTCCAGGCTTCATCCTAGAGACTGTCATCTCCCAACCAGGCGAGGTCCTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp TTTCACAGCTGCTTCTCCAGTGCAAGGAGGCTGCATGGGCTCCCTAGACAGGTGAGGCGAGGCCCTCAGTaGATCTCGGCCTCCGTGAAC +
Preference number: 4 (lower is better)
Translates to: FHSCFSSARRLHGLPRQVRRGPQ*ISASVN
Trigger: GTTCACGGAGGCCGAGATCCACTGAGGGCCTCGCCT...CACCTGTCTAGGGAGCCCATGCAGCCTCCTTGCACTGGAGAAGCAGCTGTGAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp TGTAGTCGTGGCCCTGCTTCAGGTCCTGCAGGCCCCGCCAGATGGTCATGCGGTCTCCTGAGGCAGTTTTaGACACACAGGAAGGAGAGG +
Preference number: 4 (lower is better)
Translates to: CSRGPASGPAGPARWSCGLLRQF*THRKER
Trigger: CCTCTCCTTCCTGTGTGTCCAAAACTGCCTCAGGAG...ACCGCATGACCATCTGGCGGGGCCTGCAGGACCTGAAGCAGGGCCACGACTACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR CCA 90 bp GGACGGTGGGAGAGGGATGCCTGCGTCTTCGTAGACCAGGTACCTGCGGCAACATGGAAGGACCTCGCCTaGTTGGGAGATGACAGTCTC +
Preference number: 4 (lower is better)
Translates to: GRWERDACVFVDQVPAATWKDLA*LGDDSL
Trigger: GAGACTGTCATCTCCCAACCAGGCGAGGTCCTTCCA...TGTTGCCGCAGGTACCTGGTCTACGAAGACGCAGGCATCCCTCTCCCACCGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp GCCCTTCCCAGGAGCACACTACAGGGGCTCTTGGGACAGCCTCACTGGACTCAGTGGAAGGACCTCGCCTaGTTGGGAGATGACAGTCTC +
Preference number: 4 (lower is better)
Translates to: ALPRSTLQGLLGQPHWTQWKDLA*LGDDSL
Trigger: GAGACTGTCATCTCCCAACCAGGCGAGGTCCTTCCA...CTGAGTCCAGTGAGGCTGTCCCAAGAGCCCCTGTAGTGTGCTCCTGGGAAGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp GGACCTTGCCTTTCCCCGGGCACAGCCCGAAGGTCCTGCCTCCTGAGGCAGTTTGAGGATCCTTTCCTTTaGAAGGACCTCGCCTGGTTG +
Preference number: 4 (lower is better)
Translates to: GPCLSPGTARRSCLLRQFEDPFL*KDLAWL
Trigger: CAACCAGGCGAGGTCCTTCCAAAGGAAAGGATCCTC...AAACTGCCTCAGGAGGCAGGACCTTCGGGCTGTGCCCGGGGAAAGGCAAGGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp GGACCTTGCCTTTCCCCGGGCACAGCCCGAAGGTCCTGCCTCCTGAGGCAGTTTTCCTGCAGATTTGCCTaGATTTGCCCTTCCTGGGGT +
Preference number: 4 (lower is better)
Translates to: GPCLSPGTARRSCLLRQFSCRFA*ICPSWG
Trigger: ACCCCAGGAAGGGCAAATCCAGGCAAATCTGCAGGA...AAACTGCCTCAGGAGGCAGGACCTTCGGGCTGTGCCCGGGGAAAGGCAAGGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp GGCCTGGTGGGAACGCTGGGGGAATGGGGGAGAGTCGCTGTTTCTGACCAGAGCTCCTGCAGATTTGCCTaGATTTGCCCTTCCTGGGGT +
Preference number: 4 (lower is better)
Translates to: GLVGTLGEWGRVAVSDQSSCRFA*ICPSWG
Trigger: ACCCCAGGAAGGGCAAATCCAGGCAAATCTGCAGGA...GCTCTGGTCAGAAACAGCGACTCTCCCCCATTCCCCCAGCGTTCCCACCAGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp AGCACACTACAGGGGCTCTTGGGACAGCCTCACTGGACTCAGGGTGGACAGGTATCAGGCTGCTCCTCGTaGATGGAGGTGGCCCCAGAA +
Preference number: 4 (lower is better)
Translates to: STLQGLLGQPHWTQGGQVSGCSS*MEVAPE
Trigger: TTCTGGGGCCACCTCCATCCACGAGGAGCAGCCTGA...TACCTGTCCACCCTGAGTCCAGTGAGGCTGTCCCAAGAGCCCCTGTAGTGTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp GGACGGTGGGAGAGGGATGCCTGCGTCTTCGTAGACCAGGTACCTGCGGCAACAGTCCTGATCTGGGGATaGGGGCTGTGTCTAACCTTG +
Preference number: 4 (lower is better)
Translates to: GRWERDACVFVDQVPAATVLIWG*GLCLTL
Trigger: CAAGGTTAGACACAGCCCCCATCCCCAGATCAGGAC...TGTTGCCGCAGGTACCTGGTCTACGAAGACGCAGGCATCCCTCTCCCACCGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp GCATTCCTGCAGATTTGCCTGGATTTGCCCTTCCTGGGGTTCCCTCTAGGCTTCGTGGCTGCGCCACCCTaGGAAAGCCCCGAGTCTGCT +
Preference number: 4 (lower is better)
Translates to: AFLQICLDLPFLGFPLGFVAAPP*ESPESA
Trigger: AGCAGACTCGGGGCTTTCCCAGGGTGGCGCAGCCAC...GAAGCCTAGAGGGAACCCCAGGAAGGGCAAATCCAGGCAAATCTGCAGGAATGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp GGCAGGAAGGAGGCGGTCCTGCAGAATACAGCGTGCTGGGGGCAGAGGCCAGTCTCACTGGACTCAGGGTaGACAGGTAACGTACCTAAG +
Preference number: 4 (lower is better)
Translates to: GRKEAVLQNTACWGQRPVSLDSG*TGNVPK
Trigger: CTTAGGTACGTTACCTGTCCACCCTGAGTCCAGTGA...GACTGGCCTCTGCCCCCAGCACGCTGTATTCTGCAGGACCGCCTCCTTCCTGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp TGCAGTTCCCCTGAGCCGCCGATGGAGATGGTGGCCGCGTTGCTAGAGCGGAGCTCACTGGACTCAGGGTaGACAGGTAACGTACCTAAG +
Preference number: 4 (lower is better)
Translates to: CSSPEPPMEMVAALLERSSLDSG*TGNVPK
Trigger: CTTAGGTACGTTACCTGTCCACCCTGAGTCCAGTGA...GCTCCGCTCTAGCAACGCGGCCACCATCTCCATCGGCGGCTCAGGGGAACTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000604074.5
CDS-3UTR CCA 90 bp GGAAGGACCTCGCCTGGTTGGGAGATGACAGTCTCTAGGATGAAGCCTGGAAGTGCCTGGTGGGAACGCTaGGGGAATGGGGGAGAGTCG +
Preference number: 4 (lower is better)
Translates to: GRTSPGWEMTVSRMKPGSAWWER*GNGGES
Trigger: CGACTCTCCCCCATTCCCCCAGCGTTCCCACCAGGC...ACTTCCAGGCTTCATCCTAGAGACTGTCATCTCCCAACCAGGCGAGGTCCTTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp CCTGCACTCTGGGTGGTGTCTCGGCTTGCGTGGGTGAGGGCTCCCATTGGCCCAGTTCTGAGTGACAAGTaGCTCTGTGCCAGGATACTG +
Preference number: 4 (lower is better)
Translates to: PALWVVSRLAWVRAPIGPVLSDK*LCARIL
Trigger: CAGTATCCTGGCACAGAGCCACTTGTCACTCAGAAC...TGGGCCAATGGGAGCCCTCACCCACGCAAGCCGAGACACCACCCAGAGTGCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
3UTR CAA 72 bp GAATGGGGGAGAGTCGCTGTTTCTGACCAGAGCGACTaGGACAGATGTGAGCTGACCTGCCTGGCGAGCTCC +
Preference number: 4 (lower is better)
Translates to: EWGRVAVSDQSD*DRCELTCLASS
Trigger: GGAGCTCGCCAGGCAGGTCAGCTCACATCTGTCCAAGTCGCTCTGGTCAGAAACAGCGACTCTCCCCCATTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR TCA 90 bp CTACAGGGGCTCTTGGGACAGCCTCACTGGACTCAGGGTGGACAGGTAACGTACCAGACTGTCCTTCGTTaGAGTCCCTCCCGAGCTCGT +
Preference number: 4 (lower is better)
Translates to: LQGLLGQPHWTQGGQVTYQTVLR*SPSRAR
Trigger: ACGAGCTCGGGAGGGACTTCAACGAAGGACAGTCTG...GTACGTTACCTGTCCACCCTGAGTCCAGTGAGGCTGTCCCAAGAGCCCCTGTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR TCA 90 bp AGCACACTACAGGGGCTCTTGGGACAGCCTCACTGGACTCAGGGTGGACAGGTACAGACTGTCCTTCGTTaGAGTCCCTCCCGAGCTCGT +
Preference number: 4 (lower is better)
Translates to: STLQGLLGQPHWTQGGQVQTVLR*SPSRAR
Trigger: ACGAGCTCGGGAGGGACTTCAACGAAGGACAGTCTG...TACCTGTCCACCCTGAGTCCAGTGAGGCTGTCCCAAGAGCCCCTGTAGTGTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR TCA 90 bp GGGCAGGAAGGAGGCGGTCCTGCAGAATACAGCGTGCTGGGGGCAGAGGCCAGTGTAACCCTTGGGAGGTaGAATACTCGATGCAGTTTG +
Preference number: 4 (lower is better)
Translates to: GQEGGGPAEYSVLGAEASVTLGR*NTRCSL
Trigger: CAAACTGCATCGAGTATTTCACCTCCCAAGGGTTAC...ACTGGCCTCTGCCCCCAGCACGCTGTATTCTGCAGGACCGCCTCCTTCCTGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000346387.8
ENST00000378288.8
ENST00000378295.9
CDS-3UTR TCA 90 bp CACACTACAGGGGCTCTTGGGACAGCCTCACTGGACTCAGGGTGGACAGGTAACCCTCAGTCTGTTCCCTaGCTGCCACCGCCTAGAAAG +
Preference number: 4 (lower is better)
Translates to: HTTGALGTASLDSGWTGNPQSVP*LPPPRK
Trigger: CTTTCTAGGCGGTGGCAGTCAGGGAACAGACTGAGG...GTTACCTGTCCACCCTGAGTCCAGTGAGGCTGTCCCAAGAGCCCCTGTAGTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR TCA 90 bp ACCTTGCCTTTCCCCGGGCACAGCCCGAAGGTCCTGCCTCCTGAGGCAGTTTTGAATAAGATGGAGAGCTaGGGTGACATGCAGCTGGGG +
Preference number: 4 (lower is better)
Translates to: TLPFPGHSPKVLPPEAVLNKMES*GDMQLG
Trigger: CCCCAGCTGCATGTCACCTCAGCTCTCCATCTTATT...CAAAACTGCCTCAGGAGGCAGGACCTTCGGGCTGTGCCCGGGGAAAGGCAAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR TCA 90 bp GAAGGTGGCCGTGGCAAGGGAGGAGCTGCTCCCATGGCAGAGCATTCCTGCAGAAATAAGATGGAGAGCTaGGGTGACATGCAGCTGGGG +
Preference number: 4 (lower is better)
Translates to: EGGRGKGGAAPMAEHSCRNKMES*GDMQLG
Trigger: CCCCAGCTGCATGTCACCTCAGCTCTCCATCTTATT...TCTGCAGGAATGCTCTGCCATGGGAGCAGCTCCTCCCTTGCCACGGCCACCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR TCA 90 bp TCAACAAGCCCTCTGGAACTGAAGCACATCTGCGCTGGGCTGAGGAACCCCGGGGAGAGTCGCTGTTTCTaGCCAGAGCGACTTGGACAG +
Preference number: 4 (lower is better)
Translates to: STSPLELKHICAGLRNPGESRCF*PERLGQ
Trigger: CTGTCCAAGTCGCTCTGGTCAGAAACAGCGACTCTC...CCCGGGGTTCCTCAGCCCAGCGCAGATGTGCTTCAGTTCCAGAGGGCTTGTTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp GGAAGGACCTCGCCTGGTTGGGAGATGACAGTCTCTAGGATGAAGCCTGGAAGTGGTGCTCAAACGTGGTaGCCCCATCAGGGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: GRTSPGWEMTVSRMKPGSGAQTW*PHQGRW
Trigger: CCACCTCCCCTGATGGGGGCACCACGTTTGAGCACC...ACTTCCAGGCTTCATCCTAGAGACTGTCATCTCCCAACCAGGCGAGGTCCTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp CTACAGGGGCTCTTGGGACAGCCTCACTGGACTCAGGGTGGACAGGTAACGTACAGAGAGCTCCAGAGGTaGTCAAACGTGGTGCCCCCA +
Preference number: 4 (lower is better)
Translates to: LQGLLGQPHWTQGGQVTYRELQR*SNVVPP
Trigger: TGGGGGCACCACGTTTGAGCACCTCTGGAGCTCTCT...GTACGTTACCTGTCCACCCTGAGTCCAGTGAGGCTGTCCCAAGAGCCCCTGTAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp CAGAGCGACTTGGACAGATGTGAGCTGACCTGCCTGGCGAGCTCCTTCTGCCTTGGTGGAAGACGTCCATaGTGGAATCCGTTCCGCCCA +
Preference number: 4 (lower is better)
Translates to: QSDLDRCELTCLASSFCLGGRRP*WNPFRP
Trigger: TGGGCGGAACGGATTCCAGCATGGACGTCTTCCACC...AAGGCAGAAGGAGCTCGCCAGGCAGGTCAGCTCACATCTGTCCAAGTCGCTCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp GCCAGAGCTTCCTGCCCTTCAGCTGGAAGGAGCCGGAAGGAGCTGGAAGGAAGGTTGGCCGTGCTGGACTaGTGGAAAGTGACCTCAAAG +
Preference number: 4 (lower is better)
Translates to: ARASCPSAGRSRKELEGRLAVLD*WKVTSK
Trigger: CTTTGAGGTCACTTTCCAGCAGTCCAGCACGGCCAA...CCTTCCTTCCAGCTCCTTCCGGCTCCTTCCAGCTGAAGGGCAGGAAGCTCTGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp GGCAGGAAGGAGGCGGTCCTGCAGAATACAGCGTGCTGGGGGCAGAGGCCAGTCGGGTCATCCACATACTaGGAGAGATTATTGCCTTCC +
Preference number: 4 (lower is better)
Translates to: GRKEAVLQNTACWGQRPVGSSTY*ERLLPS
Trigger: GGAAGGCAATAATCTCTCGCAGTATGTGGATGACCC...GACTGGCCTCTGCCCCCAGCACGCTGTATTCTGCAGGACCGCCTCCTTCCTGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp CTACAGGGGCTCTTGGGACAGCCTCACTGGACTCAGGGTGGACAGGTAACGTACACAGCCCGAAGGTCCTaGCTCCTGAGGCAGTTTTGG +
Preference number: 4 (lower is better)
Translates to: LQGLLGQPHWTQGGQVTYTARRS*LLRQFW
Trigger: CCAAAACTGCCTCAGGAGGCAGGACCTTCGGGCTGT...GTACGTTACCTGTCCACCCTGAGTCCAGTGAGGCTGTCCCAAGAGCCCCTGTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp CCTCACTGGACTCAGGGTGGACAGGTAACGTACCTAAGAAACAAATCAACAAGCGTCCCCACCCACGCCTaGCATGGAGCACGCCGGGGC +
Preference number: 4 (lower is better)
Translates to: PHWTQGGQVTYLRNKSTSVPTHA*HGARRG
Trigger: GCCCCGGCGTGCTCCATGGCAGGCGTGGGTGGGGAC...GCTTGTTGATTTGTTTCTTAGGTACGTTACCTGTCCACCCTGAGTCCAGTGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp TTTCACAGCTGCTTCTCCAGTGCAAGGAGGCTGCATGGGCTCCCTAGACAGGTGCACCAAGGCTCAGGCTaGTCCTCGTGGATGGAGGTG +
Preference number: 4 (lower is better)
Translates to: FHSCFSSARRLHGLPRQVHQGSG*SSWMEV
Trigger: CACCTCCATCCACGAGGAGCAGCCTGAGCCTTGGTG...CACCTGTCTAGGGAGCCCATGCAGCCTCCTTGCACTGGAGAAGCAGCTGTGAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp TTTCACAGCTGCTTCTCCAGTGCAAGGAGGCTGCATGGGCTCCCTAGACAGGTGCGTAGACCAGGTACCTaGGGCAACACCAGTCGCTGC +
Preference number: 4 (lower is better)
Translates to: FHSCFSSARRLHGLPRQVRRPGT*GNTSRC
Trigger: GCAGCGACTGGTGTTGCCGCAGGTACCTGGTCTACG...CACCTGTCTAGGGAGCCCATGCAGCCTCCTTGCACTGGAGAAGCAGCTGTGAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp AGCACACTACAGGGGCTCTTGGGACAGCCTCACTGGACTCAGGGTGGACAGGTAACGGTGGGAGAGGGATaGCTGCGTCTTCGTAGACCA +
Preference number: 4 (lower is better)
Translates to: STLQGLLGQPHWTQGGQVTVGEG*LRLRRP
Trigger: TGGTCTACGAAGACGCAGGCATCCCTCTCCCACCGT...TACCTGTCCACCCTGAGTCCAGTGAGGCTGTCCCAAGAGCCCCTGTAGTGTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp TTGCATTTTCTCCTGACCACGGCGAAGTCTCAACTCTGTCTACTTTCACAGCTGGCACCCAGGCGACTGTaGTGTCAGCGGCCCCCGGGG +
Preference number: 4 (lower is better)
Translates to: LHFLLTTAKSQLCLLSQLAPRRL*CQRPPG
Trigger: CCCCGGGGGCCGCTGACAGCACAGTCGCCTGGGTGC...CAGCTGTGAAAGTAGACAGAGTTGAGACTTCGCCGTGGTCAGGAGAAAATGCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp GGAAGGACCTCGCCTGGTTGGGAGATGACAGTCTCTAGGATGAAGCCTGGAAGTGCGGCCAGAGCTTCCTaGCCTTCAGCTGGAAGGAGC +
Preference number: 4 (lower is better)
Translates to: GRTSPGWEMTVSRMKPGSAARAS*PSAGRS
Trigger: GCTCCTTCCAGCTGAAGGGCAGGAAGCTCTGGCCGC...ACTTCCAGGCTTCATCCTAGAGACTGTCATCTCCCAACCAGGCGAGGTCCTTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp ATGGCAATAAGATGGAGAGCTGAGGTGACATGCAGCTGGGGTGGCTGCGCCACCGAACTGAAGCACATCTaGGCTGGGCTGAGGAACCCC +
Preference number: 4 (lower is better)
Translates to: MAIRWRAEVTCSWGGCATELKHI*AGLRNP
Trigger: GGGGTTCCTCAGCCCAGCGCAGATGTGCTTCAGTTC...GGTGGCGCAGCCACCCCAGCTGCATGTCACCTCAGCTCTCCATCTTATTGCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp ATGGCAATAAGATGGAGAGCTGAGGTGACATGCAGCTGGGGTGGCTGCGCCACCCTCCAACCCCTGCACTaGTGGGAAAACCATCCGCCT +
Preference number: 4 (lower is better)
Translates to: MAIRWRAEVTCSWGGCATLQPLH*WENHPP
Trigger: AGGCGGATGGTTTTCCCAGCAGTGCAGGGGTTGGAG...GGTGGCGCAGCCACCCCAGCTGCATGTCACCTCAGCTCTCCATCTTATTGCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp CAGAGCGACTTGGACAGATGTGAGCTGACCTGCCTGGCGAGCTCCTTCTGCCTTCCTCCCTCCAACCCCTaGACTGCTGGGAAAACCATC +
Preference number: 4 (lower is better)
Translates to: QSDLDRCELTCLASSFCLPPSNP*TAGKTI
Trigger: GATGGTTTTCCCAGCAGTGCAGGGGTTGGAGGGAGG...AAGGCAGAAGGAGCTCGCCAGGCAGGTCAGCTCACATCTGTCCAAGTCGCTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp AGCACACTACAGGGGCTCTTGGGACAGCCTCACTGGACTCAGGGTGGACAGGTAAGATGTGAGCTGACCTaGCTGGCGAGCTCCTTCTGC +
Preference number: 4 (lower is better)
Translates to: STLQGLLGQPHWTQGGQVRCELT*LASSFC
Trigger: GCAGAAGGAGCTCGCCAGGCAGGTCAGCTCACATCT...TACCTGTCCACCCTGAGTCCAGTGAGGCTGTCCCAAGAGCCCCTGTAGTGTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp TTTCACAGCTGCTTCTCCAGTGCAAGGAGGCTGCATGGGCTCCCTAGACAGGTGAGAGGTGCTCAAACGTaGTGCCCCCATCAGGGGAGG +
Preference number: 4 (lower is better)
Translates to: FHSCFSSARRLHGLPRQVRGAQT*CPHQGR
Trigger: CCTCCCCTGATGGGGGCACCACGTTTGAGCACCTCT...CACCTGTCTAGGGAGCCCATGCAGCCTCCTTGCACTGGAGAAGCAGCTGTGAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp GAAGGTGGCCGTGGCAAGGGAGGAGCTGCTCCCATGGCAGAGCATTCCTGCAGAGAAGTAGGTGCTGTCTaGTTCCAGAGAGCTCCAGAG +
Preference number: 4 (lower is better)
Translates to: EGGRGKGGAAPMAEHSCREVGAV*FQRAPE
Trigger: CTCTGGAGCTCTCTGGAACCAGACAGCACCTACTTC...TCTGCAGGAATGCTCTGCCATGGGAGCAGCTCCTCCCTTGCCACGGCCACCTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp TTTCACAGCTGCTTCTCCAGTGCAAGGAGGCTGCATGGGCTCCCTAGACAGGTGTCCAGGTGGCTGACTTaGCCGTGCTGGACTGCTGGA +
Preference number: 4 (lower is better)
Translates to: FHSCFSSARRLHGLPRQVSRWLT*PCWTAG
Trigger: TCCAGCAGTCCAGCACGGCCAAGTCAGCCACCTGGA...CACCTGTCTAGGGAGCCCATGCAGCCTCCTTGCACTGGAGAAGCAGCTGTGAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp AGCACACTACAGGGGCTCTTGGGACAGCCTCACTGGACTCAGGGTGGACAGGTATCTTGTAAACAGGCATaGCCCGGATGGCGGTGCCTG +
Preference number: 4 (lower is better)
Translates to: STLQGLLGQPHWTQGGQVSCKQA*PGWRCL
Trigger: CAGGCACCGCCATCCGGGCCATGCCTGTTTACAAGA...TACCTGTCCACCCTGAGTCCAGTGAGGCTGTCCCAAGAGCCCCTGTAGTGTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp CCCCAAGAGATGGGTGTGGTGCCTGGGGCATGGGTCTTAGCCTTTCTGGTCTCACCCCCAGGTCCTCAATaGTCAGGTTCTGCAGGTGGT +
Preference number: 4 (lower is better)
Translates to: PQEMGVVPGAWVLAFLVSPPGPQ*SGSAGG
Trigger: ACCACCTGCAGAACCTGACCATTGAGGACCTGGGGG...TGAGACCAGAAAGGCTAAGACCCATGCCCCAGGCACCACACCCATCTCTTGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000346387.8
ENST00000378288.8
ENST00000378295.9
CDS-3UTR CCA 90 bp ACCTTGCCTTTCCCCGGGCACAGCCCGAAGGTCCTGCCTCCTGAGGCAGTTTTGCTCCTGAGGCAGTTTTaGACACACAGGAAGGAGAGG +
Preference number: 4 (lower is better)
Translates to: TLPFPGHSPKVLPPEAVLLLRQF*THRKER
Trigger: CCTCTCCTTCCTGTGTGTCCAAAACTGCCTCAGGAG...CAAAACTGCCTCAGGAGGCAGGACCTTCGGGCTGTGCCCGGGGAAAGGCAAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000346387.8
ENST00000354437.8
ENST00000357733.7
ENST00000378280.5
ENST00000378285.5
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp TCAACAAGCCCTCTGGAACTGAAGCACATCTGCGCTGGGCTGAGGAACCCCGGGAGGACCTCGCCTGGTTaGGAGATGACAGTCTCTAGG +
Preference number: 4 (lower is better)
Translates to: STSPLELKHICAGLRNPGRTSPG*EMTVSR
Trigger: CCTAGAGACTGTCATCTCCCAACCAGGCGAGGTCCT...CCCGGGGTTCCTCAGCCCAGCGCAGATGTGCTTCAGTTCCAGAGGGCTTGTTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp GAAGGTGGCCGTGGCAAGGGAGGAGCTGCTCCCATGGCAGAGCATTCCTGCAGAGAGGATCCTTTCCTTTaGAAGGACCTCGCCTGGTTG +
Preference number: 4 (lower is better)
Translates to: EGGRGKGGAAPMAEHSCREDPFL*KDLAWL
Trigger: CAACCAGGCGAGGTCCTTCCAAAGGAAAGGATCCTC...TCTGCAGGAATGCTCTGCCATGGGAGCAGCTCCTCCCTTGCCACGGCCACCTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp GTGCTCCGGGACGGTCAAGGTTCGGCCACCAAGGCTCAGGCTGCTCCTCGTGGATCAGACACAGTCACTTaGCTGCTCACTACTATCCAG +
Preference number: 4 (lower is better)
Translates to: VLRDGQGSATKAQAAPRGSDTVT*LLTTIQ
Trigger: CTGGATAGTAGTGAGCAGCCAAGTGACTGTGTCTGA...TCCACGAGGAGCAGCCTGAGCCTTGGTGGCCGAACCTTGACCGTCCCGGAGCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp AGAGCGGAGCAGCTGCTGCGCGGTGCTGTAGTCGTGGCCCTGCTTCAGGTCCTGTCAGACACAGTCACTTaGCTGCTCACTACTATCCAG +
Preference number: 4 (lower is better)
Translates to: RAEQLLRGAVVVALLQVLSDTVT*LLTTIQ
Trigger: CTGGATAGTAGTGAGCAGCCAAGTGACTGTGTCTGA...CAGGACCTGAAGCAGGGCCACGACTACAGCACCGCGCAGCAGCTGCTCCGCTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604074.5
CDS-3UTR CCA 90 bp CCGCCGATGGAGATGGTGGCCGCGTTGCTAGAGCGGAGCAGCTGCTGCGCGGTGTCCCTGAAAATACACTaGTGTTTCAGACACAGTCAC +
Preference number: 4 (lower is better)
Translates to: PPMEMVAALLERSSCCAVSLKIH*CFRHSH
Trigger: GTGACTGTGTCTGAAACACCAGTGTATTTTCAGGGA...CACCGCGCAGCAGCTGCTCCGCTCTAGCAACGCGGCCACCATCTCCATCGGCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000604074.5
CDS-3UTR CCA 90 bp AGCACACTACAGGGGCTCTTGGGACAGCCTCACTGGACTCAGGGTGGACAGGTATCAGCTTCCTCAGCCTaGCTCATGGGCGCTAGGTTG +
Preference number: 4 (lower is better)
Translates to: STLQGLLGQPHWTQGGQVSASSA*LMGARL
Trigger: CAACCTAGCGCCCATGAGCCAGGCTGAGGAAGCTGA...TACCTGTCCACCCTGAGTCCAGTGAGGCTGTCCCAAGAGCCCCTGTAGTGTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp CAGAGCGACTTGGACAGATGTGAGCTGACCTGCCTGGCGAGCTCCTTCTGCCTTCAAGTCCCGCCCACCTaGCTTCTCACTCAGCTTCCT +
Preference number: 4 (lower is better)
Translates to: QSDLDRCELTCLASSFCLQVPPT*LLTQLP
Trigger: AGGAAGCTGAGTGAGAAGCCAGGTGGGCGGGACTTG...AAGGCAGAAGGAGCTCGCCAGGCAGGTCAGCTCACATCTGTCCAAGTCGCTCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp GGAAGGACCTCGCCTGGTTGGGAGATGACAGTCTCTAGGATGAAGCCTGGAAGTCCTCGTGGATGGAGGTaGCCCCAGAAAGGGCCTGTG +
Preference number: 4 (lower is better)
Translates to: GRTSPGWEMTVSRMKPGSPRGWR*PQKGPV
Trigger: CACAGGCCCTTTCTGGGGCCACCTCCATCCACGAGG...ACTTCCAGGCTTCATCCTAGAGACTGTCATCTCCCAACCAGGCGAGGTCCTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp GGAAGGACCTCGCCTGGTTGGGAGATGACAGTCTCTAGGATGAAGCCTGGAAGTAGGCAGCCTGCACTCTaGGTGGTGTCTCGGCTTGCG +
Preference number: 4 (lower is better)
Translates to: GRTSPGWEMTVSRMKPGSRQPAL*VVSRLA
Trigger: CGCAAGCCGAGACACCACCCAGAGTGCAGGCTGCCT...ACTTCCAGGCTTCATCCTAGAGACTGTCATCTCCCAACCAGGCGAGGTCCTTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp GCATTCCTGCAGATTTGCCTGGATTTGCCCTTCCTGGGGTTCCCTCTAGGCTTCCTAGACAGGTGCAGCTaGGGCCATCTGGCTGCTCCG +
Preference number: 4 (lower is better)
Translates to: AFLQICLDLPFLGFPLGFLDRCS*GHLAAP
Trigger: CGGAGCAGCCAGATGGCCCCAGCTGCACCTGTCTAG...GAAGCCTAGAGGGAACCCCAGGAAGGGCAAATCCAGGCAAATCTGCAGGAATGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp TCAACAAGCCCTCTGGAACTGAAGCACATCTGCGCTGGGCTGAGGAACCCCGGGCAACCCCTGCACTGCTaGGAAAACCATCCGCCTTCA +
Preference number: 4 (lower is better)
Translates to: STSPLELKHICAGLRNPGQPLHC*ENHPPS
Trigger: TGAAGGCGGATGGTTTTCCCAGCAGTGCAGGGGTTG...CCCGGGGTTCCTCAGCCCAGCGCAGATGTGCTTCAGTTCCAGAGGGCTTGTTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp GGCCTGGTGGGAACGCTGGGGGAATGGGGGAGAGTCGCTGTTTCTGACCAGAGCGTTCTGAGTGACAAGTaGCTCTGTGCCAGGATACTG +
Preference number: 4 (lower is better)
Translates to: GLVGTLGEWGRVAVSDQSVLSDK*LCARIL
Trigger: CAGTATCCTGGCACAGAGCCACTTGTCACTCAGAAC...GCTCTGGTCAGAAACAGCGACTCTCCCCCATTCCCCCAGCGTTCCCACCAGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp GTGTCAGGATGGGCCCCCGCGGCTCCTGAAGTGGAACATGGGGGAAGAGTGGGGCTGGTAACAGAGGAGTaGATGTTTGTGCGTTGGAGA +
Preference number: 4 (lower is better)
Translates to: VSGWAPAAPEVEHGGRVGLVTEE*MFVRWR
Trigger: TCTCCAACGCACAAACATCCACTCCTCTGTTACCAG...CCCCACTCTTCCCCCATGTTCCACTTCAGGAGCCGCGGGGGCCCATCCTGACAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR TCA 90 bp GCATTCCTGCAGATTTGCCTGGATTTGCCCTTCCTGGGGTTCCCTCTAGGCTTCCGCTCTGCCTGCCGGTaGCAGGGTCATCCACATACT +
Preference number: 4 (lower is better)
Translates to: AFLQICLDLPFLGFPLGFRSACR*QGHPHT
Trigger: AGTATGTGGATGACCCTGTCACCGGCAGGCAGAGCG...GAAGCCTAGAGGGAACCCCAGGAAGGGCAAATCCAGGCAAATCTGCAGGAATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR TCA 90 bp ATGGCAATAAGATGGAGAGCTGAGGTGACATGCAGCTGGGGTGGCTGCGCCACCGAAGGTCCTGCCTCCTaGGGCAGTTTTGGACACACA +
Preference number: 4 (lower is better)
Translates to: MAIRWRAEVTCSWGGCATEGPAS*GSFGHT
Trigger: TGTGTGTCCAAAACTGCCTCAGGAGGCAGGACCTTC...GGTGGCGCAGCCACCCCAGCTGCATGTCACCTCAGCTCTCCATCTTATTGCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR TCA 90 bp AGCACACTACAGGGGCTCTTGGGACAGCCTCACTGGACTCAGGGTGGACAGGTAGAAGGTCCTGCCTCCTaGGGCAGTTTTGGACACACA +
Preference number: 4 (lower is better)
Translates to: STLQGLLGQPHWTQGGQVEGPAS*GSFGHT
Trigger: TGTGTGTCCAAAACTGCCTCAGGAGGCAGGACCTTC...TACCTGTCCACCCTGAGTCCAGTGAGGCTGTCCCAAGAGCCCCTGTAGTGTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR TCA 90 bp GGAAGGACCTCGCCTGGTTGGGAGATGACAGTCTCTAGGATGAAGCCTGGAAGTGATGGAGAGCTGAGGTaGCATGCAGCTGGGGTGGCT +
Preference number: 4 (lower is better)
Translates to: GRTSPGWEMTVSRMKPGSDGELR*HAAGVA
Trigger: AGCCACCCCAGCTGCATGTCACCTCAGCTCTCCATC...ACTTCCAGGCTTCATCCTAGAGACTGTCATCTCCCAACCAGGCGAGGTCCTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp TCAACAAGCCCTCTGGAACTGAAGCACATCTGCGCTGGGCTGAGGAACCCCGGGGAAGGTCGAAGTAGGTaGTGTCTGGTTCCAGAGAGC +
Preference number: 4 (lower is better)
Translates to: STSPLELKHICAGLRNPGEGRSR*CLVPES
Trigger: GCTCTCTGGAACCAGACAGCACCTACTTCGACCTTC...CCCGGGGTTCCTCAGCCCAGCGCAGATGTGCTTCAGTTCCAGAGGGCTTGTTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp GGCCTGGTGGGAACGCTGGGGGAATGGGGGAGAGTCGCTGTTTCTGACCAGAGCGGGTCATCCACATACTaGGAGAGATTATTGCCTTCC +
Preference number: 4 (lower is better)
Translates to: GLVGTLGEWGRVAVSDQSGSSTY*ERLLPS
Trigger: GGAAGGCAATAATCTCTCGCAGTATGTGGATGACCC...GCTCTGGTCAGAAACAGCGACTCTCCCCCATTCCCCCAGCGTTCCCACCAGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp GGACGGTGGGAGAGGGATGCCTGCGTCTTCGTAGACCAGGTACCTGCGGCAACATCTGCAGGTGGTAAATaGTCTGTAACCCTTGGGAGG +
Preference number: 4 (lower is better)
Translates to: GRWERDACVFVDQVPAATSAGGK*SVTLGR
Trigger: CCTCCCAAGGGTTACAGAGCATTTACCACCTGCAGA...TGTTGCCGCAGGTACCTGGTCTACGAAGACGCAGGCATCCCTCTCCCACCGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346387.8
ENST00000378288.8
ENST00000378295.9
CDS-3UTR GCA 90 bp CGAGGCCCTCAGTGGATCTCGGCCTCCGTGAACTCCTCCTTGATGGGCTGCTTGTCTGCAGGTGGTAAATaGTCTGTAACCCTTGGGAGG +
Preference number: 4 (lower is better)
Translates to: RGPQWISASVNSSLMGCLSAGGK*SVTLGR
Trigger: CCTCCCAAGGGTTACAGAGCATTTACCACCTGCAGA...CAAGCAGCCCATCAAGGAGGAGTTCACGGAGGCCGAGATCCACTGAGGGCCTCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378280.5
CDS-3UTR GCA 90 bp CAGCTGGGGCCATCTGGCTGCTCCGTGTTCTGGCCGGCTTCCTTGGACATCTGGACACAGTCACTTGGCTaGTCACTACTATCCAGAACC +
Preference number: 4 (lower is better)
Translates to: QLGPSGCSVFWPASLDIWTQSLG*SLLSRT
Trigger: GGTTCTGGATAGTAGTGAGCAGCCAAGTGACTGTGT...CCAGATGTCCAAGGAAGCCGGCCAGAACACGGAGCAGCCAGATGGCCCCAGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp GGAAGGACCTCGCCTGGTTGGGAGATGACAGTCTCTAGGATGAAGCCTGGAAGTGGAAGGAGGCGGTCCTaGAGAATACAGCGTGCTGGG +
Preference number: 4 (lower is better)
Translates to: GRTSPGWEMTVSRMKPGSGRRRS*RIQRAG
Trigger: CCCAGCACGCTGTATTCTGCAGGACCGCCTCCTTCC...ACTTCCAGGCTTCATCCTAGAGACTGTCATCTCCCAACCAGGCGAGGTCCTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp GCATTCCTGCAGATTTGCCTGGATTTGCCCTTCCTGGGGTTCCCTCTAGGCTTCCACCAAGGCTCAGGCTaGTCCTCGTGGATGGAGGTG +
Preference number: 4 (lower is better)
Translates to: AFLQICLDLPFLGFPLGFHQGSG*SSWMEV
Trigger: CACCTCCATCCACGAGGAGCAGCCTGAGCCTTGGTG...GAAGCCTAGAGGGAACCCCAGGAAGGGCAAATCCAGGCAAATCTGCAGGAATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp CTCCCCACCCGGCCTTCCTGGGAACAAGTCCCGCCCACCTGGCTTCTCACTCAGCCTGAGGGGCTTAACTaGTTTTTCTGGGAGATGTTA +
Preference number: 4 (lower is better)
Translates to: LPTRPSWEQVPPTWLLTQPEGLN*FFWEML
Trigger: TAACATCTCCCAGAAAAAGCAGTTAAGCCCCTCAGG...CTGAGTGAGAAGCCAGGTGGGCGGGACTTGTTCCCAGGAAGGCCGGGTGGGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp GCATTCCTGCAGATTTGCCTGGATTTGCCCTTCCTGGGGTTCCCTCTAGGCTTCCGTAGACCAGGTACCTaGGGCAACACCAGTCGCTGC +
Preference number: 4 (lower is better)
Translates to: AFLQICLDLPFLGFPLGFRRPGT*GNTSRC
Trigger: GCAGCGACTGGTGTTGCCGCAGGTACCTGGTCTACG...GAAGCCTAGAGGGAACCCCAGGAAGGGCAAATCCAGGCAAATCTGCAGGAATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp ATGGCAATAAGATGGAGAGCTGAGGTGACATGCAGCTGGGGTGGCTGCGCCACCTGGGAGAGGGATGCCTaGGTCTTCGTAGACCAGGTA +
Preference number: 4 (lower is better)
Translates to: MAIRWRAEVTCSWGGCATWERDA*VFVDQV
Trigger: TACCTGGTCTACGAAGACGCAGGCATCCCTCTCCCA...GGTGGCGCAGCCACCCCAGCTGCATGTCACCTCAGCTCTCCATCTTATTGCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp AGGCCCTCAGTGGATCTCGGCCTCCGTGAACTCCTCCTTGATGGGCTGCTTGCGGTCTACTTTCACAGCTaGTTCTCCAGTGCAAGGAGG +
Preference number: 4 (lower is better)
Translates to: RPSVDLGLRELLLDGLLAVYFHS*FSSARR
Trigger: CCTCCTTGCACTGGAGAAGCAGCTGTGAAAGTAGAC...CGCAAGCAGCCCATCAAGGAGGAGTTCACGGAGGCCGAGATCCACTGAGGGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604074.5
CDS-3UTR GCA 90 bp CTACAGGGGCTCTTGGGACAGCCTCACTGGACTCAGGGTGGACAGGTAACGTACTTGTTCATGCCCCCGTaGACCTTGTTCATGGGCGAG +
Preference number: 4 (lower is better)
Translates to: LQGLLGQPHWTQGGQVTYLFMPP*TLFMGE
Trigger: CTCGCCCATGAACAAGGTGCACGGGGGCATGAACAA...GTACGTTACCTGTCCACCCTGAGTCCAGTGAGGCTGTCCCAAGAGCCCCTGTAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378288.8
ENST00000378295.9
CDS-3UTR CCA 90 bp TTTCACAGCTGCTTCTCCAGTGCAAGGAGGCTGCATGGGCTCCCTAGACAGGTGGGAAGACGTCCATGCTaGAATCCGTTCCGCCCACCA +
Preference number: 4 (lower is better)
Translates to: FHSCFSSARRLHGLPRQVGRRPC*NPFRPP
Trigger: TGGTGGGCGGAACGGATTCCAGCATGGACGTCTTCC...CACCTGTCTAGGGAGCCCATGCAGCCTCCTTGCACTGGAGAAGCAGCTGTGAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp CCCCAAGAGATGGGTGTGGTGCCTGGGGCATGGGTCTTAGCCTTTCTGGTCTCAGTCATGCCCTCCAGGTaGAAGACGTCCATGCTGGAA +
Preference number: 4 (lower is better)
Translates to: PQEMGVVPGAWVLAFLVSVMPSR*KTSMLE
Trigger: TTCCAGCATGGACGTCTTCCACCTGGAGGGCATGAC...TGAGACCAGAAAGGCTAAGACCCATGCCCCAGGCACCACACCCATCTCTTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp ATGGCAATAAGATGGAGAGCTGAGGTGACATGCAGCTGGGGTGGCTGCGCCACCACATGGTGTCGAAGGTaGAGCTGGGTTGTGCGTAGG +
Preference number: 4 (lower is better)
Translates to: MAIRWRAEVTCSWGGCATTWCRR*SWVVRR
Trigger: CCTACGCACAACCCAGCTCCACCTTCGACACCATGT...GGTGGCGCAGCCACCCCAGCTGCATGTCACCTCAGCTCTCCATCTTATTGCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp CCCCAAGAGATGGGTGTGGTGCCTGGGGCATGGGTCTTAGCCTTTCTGGTCTCAGCCGTGCTGGACTGCTaGAAAGTGACCTCAAAGTGG +
Preference number: 4 (lower is better)
Translates to: PQEMGVVPGAWVLAFLVSAVLDC*KVTSKW
Trigger: CCACTTTGAGGTCACTTTCCAGCAGTCCAGCACGGC...TGAGACCAGAAAGGCTAAGACCCATGCCCCAGGCACCACACCCATCTCTTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp AGCACACTACAGGGGCTCTTGGGACAGCCTCACTGGACTCAGGGTGGACAGGTAATAGGAGTCCACCAGTaGCTGCGGCACCAACTCCAT +
Preference number: 4 (lower is better)
Translates to: STLQGLLGQPHWTQGGQVIGVHQ*LRHQLH
Trigger: ATGGAGTTGGTGCCGCAGCCACTGGTGGACTCCTAT...TACCTGTCCACCCTGAGTCCAGTGAGGCTGTCCCAAGAGCCCCTGTAGTGTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp GTGTGGCGCACGCGGAAGTGCACGGCCTCCATGACCCGCTGGCGCTGCAGTTCCTCGCAAAATACTTTTTaGCAGTCCATCAGCAAAGAG +
Preference number: 4 (lower is better)
Translates to: VWRTRKCTASMTRWRCSSSQNTF*QSISKE
Trigger: CTCTTTGCTGATGGACTGCCAAAAAGTATTTTGCGA...GGAACTGCAGCGCCAGCGGGTCATGGAGGCCGTGCACTTCCGCGTGCGCCACAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000604074.5
CDS-3UTR CCA 90 bp CAGCTGGGGCCATCTGGCTGCTCCGTGTTCTGGCCGGCTTCCTTGGACATCTGGTCAGACACAGTCACTTaGCTGCTCACTACTATCCAG +
Preference number: 4 (lower is better)
Translates to: QLGPSGCSVFWPASLDIWSDTVT*LLTTIQ
Trigger: CTGGATAGTAGTGAGCAGCCAAGTGACTGTGTCTGA...CCAGATGTCCAAGGAAGCCGGCCAGAACACGGAGCAGCCAGATGGCCCCAGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp GCATTCCTGCAGATTTGCCTGGATTTGCCCTTCCTGGGGTTCCCTCTAGGCTTCCAGAATACAGCGTGCTaGGGGCAGAGGCCAGTCCCA +
Preference number: 4 (lower is better)
Translates to: AFLQICLDLPFLGFPLGFQNTAC*GQRPVP
Trigger: TGGGACTGGCCTCTGCCCCCAGCACGCTGTATTCTG...GAAGCCTAGAGGGAACCCCAGGAAGGGCAAATCCAGGCAAATCTGCAGGAATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp CTACAGGGGCTCTTGGGACAGCCTCACTGGACTCAGGGTGGACAGGTAACGTACGAGGAGCTGCTCCCATaGCAGAGCATTCCTGCAGAT +
Preference number: 4 (lower is better)
Translates to: LQGLLGQPHWTQGGQVTYEELLP*QSIPAD
Trigger: ATCTGCAGGAATGCTCTGCCATGGGAGCAGCTCCTC...GTACGTTACCTGTCCACCCTGAGTCCAGTGAGGCTGTCCCAAGAGCCCCTGTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp GGAAGGACCTCGCCTGGTTGGGAGATGACAGTCTCTAGGATGAAGCCTGGAAGTGGCCTACTAACTCCCTaGGGTGCTCCACGAAGGCCT +
Preference number: 4 (lower is better)
Translates to: GRTSPGWEMTVSRMKPGSGLLTP*GAPRRP
Trigger: AGGCCTTCGTGGAGCACCCCAGGGAGTTAGTAGGCC...ACTTCCAGGCTTCATCCTAGAGACTGTCATCTCCCAACCAGGCGAGGTCCTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp ATGGCAATAAGATGGAGAGCTGAGGTGACATGCAGCTGGGGTGGCTGCGCCACCGTCCTGATCTGGGGATaGGGGCTGTGTCTAACCTTG +
Preference number: 4 (lower is better)
Translates to: MAIRWRAEVTCSWGGCATVLIWG*GLCLTL
Trigger: CAAGGTTAGACACAGCCCCCATCCCCAGATCAGGAC...GGTGGCGCAGCCACCCCAGCTGCATGTCACCTCAGCTCTCCATCTTATTGCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp GCAGAGAGAGTCCCCAGCCCCCGGCGCGGGCAAGACGCAGTTAGGGACATTCCCAAAATGGCAATAAGATaGAGAGCTGAGGTGACATGC +
Preference number: 4 (lower is better)
Translates to: AERVPSPRRGQDAVRDIPKMAIR*RAEVTC
Trigger: GCATGTCACCTCAGCTCTCCATCTTATTGCCATTTT...GGGAATGTCCCTAACTGCGTCTTGCCCGCGCCGGGGGCTGGGGACTCTCTCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp AGCACACTACAGGGGCTCTTGGGACAGCCTCACTGGACTCAGGGTGGACAGGTATTGGGACAGCCTCACTaGACTCAGGGTGGACAGGTA +
Preference number: 4 (lower is better)
Translates to: STLQGLLGQPHWTQGGQVLGQPH*TQGGQV
Trigger: TACCTGTCCACCCTGAGTCCAGTGAGGCTGTCCCAA...TACCTGTCCACCCTGAGTCCAGTGAGGCTGTCCCAAGAGCCCCTGTAGTGTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp CACACTACAGGGGCTCTTGGGACAGCCTCACTGGACTCAGGGTGGACAGGTAACTTGGGACAGCCTCACTaGACTCAGGGTGGACAGGTA +
Preference number: 4 (lower is better)
Translates to: HTTGALGTASLDSGWTGNLGQPH*TQGGQV
Trigger: TACCTGTCCACCCTGAGTCCAGTGAGGCTGTCCCAA...GTTACCTGTCCACCCTGAGTCCAGTGAGGCTGTCCCAAGAGCCCCTGTAGTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp ACGCGGAAGTGCACGGCCTCCATGACCCGCTGGCGCTGCAGTTCCCCTGAGCCGCAGTTGTTATGTCATTaGAGGGCGTCCATTAATACT +
Preference number: 4 (lower is better)
Translates to: TRKCTASMTRWRCSSPEPQLLCH*RASINT
Trigger: AGTATTAATGGACGCCCTCCAATGACATAACAACTG...CGGCTCAGGGGAACTGCAGCGCCAGCGGGTCATGGAGGCCGTGCACTTCCGCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000604074.5
CDS-3UTR CCA 90 bp CTACAGGGGCTCTTGGGACAGCCTCACTGGACTCAGGGTGGACAGGTAACGTACTTGGCTGGCACTGCGTaGCCATGGTTGTTGAGCATC +
Preference number: 4 (lower is better)
Translates to: LQGLLGQPHWTQGGQVTYLAGTA*PWLLSI
Trigger: GATGCTCAACAACCATGGCCACGCAGTGCCAGCCAA...GTACGTTACCTGTCCACCCTGAGTCCAGTGAGGCTGTCCCAAGAGCCCCTGTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
CDS-3UTR TCA 90 bp CACACTACAGGGGCTCTTGGGACAGCCTCACTGGACTCAGGGTGGACAGGTAACATTATTCCCCCGGCTTaGCTGGGGAAGGTCGAAGTA +
Preference number: 4 (lower is better)
Translates to: HTTGALGTASLDSGWTGNIIPPA*LGKVEV
Trigger: TACTTCGACCTTCCCCAGTCAAGCCGGGGGAATAAT...GTTACCTGTCCACCCTGAGTCCAGTGAGGCTGTCCCAAGAGCCCCTGTAGTGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378295.9
ENST00000604074.5
CDS-3UTR TCA 90 bp TTTCACAGCTGCTTCTCCAGTGCAAGGAGGCTGCATGGGCTCCCTAGACAGGTGTGGACTGCTGGAAAGTaGCCTCAAAGTGGTGGGGTC +
Preference number: 4 (lower is better)
Translates to: FHSCFSSARRLHGLPRQVWTAGK*PQSGGV
Trigger: GACCCCACCACTTTGAGGTCACTTTCCAGCAGTCCA...CACCTGTCTAGGGAGCCCATGCAGCCTCCTTGCACTGGAGAAGCAGCTGTGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR TCA 90 bp GGAAGGACCTCGCCTGGTTGGGAGATGACAGTCTCTAGGATGAAGCCTGGAAGTAGCAAGATGGAGTCCTaGTCTGGGGATGGGGGCTGT +
Preference number: 4 (lower is better)
Translates to: GRTSPGWEMTVSRMKPGSSKMES*SGDGGC
Trigger: ACAGCCCCCATCCCCAGATCAGGACTCCATCTTGCT...ACTTCCAGGCTTCATCCTAGAGACTGTCATCTCCCAACCAGGCGAGGTCCTTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR TCA 90 bp GCATTCCTGCAGATTTGCCTGGATTTGCCCTTCCTGGGGTTCCCTCTAGGCTTCTCTGCCTTGCCTCTCTaGGCAGACTCAGGACCACTG +
Preference number: 4 (lower is better)
Translates to: AFLQICLDLPFLGFPLGFSALPL*ADSGPL
Trigger: CAGTGGTCCTGAGTCTGCTCAGAGAGGCAAGGCAGA...GAAGCCTAGAGGGAACCCCAGGAAGGGCAAATCCAGGCAAATCTGCAGGAATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp AGCACACTACAGGGGCTCTTGGGACAGCCTCACTGGACTCAGGGTGGACAGGTAGAAGGTCGAAGTAGGTaGTGTCTGGTTCCAGAGAGC +
Preference number: 4 (lower is better)
Translates to: STLQGLLGQPHWTQGGQVEGRSR*CLVPES
Trigger: GCTCTCTGGAACCAGACAGCACCTACTTCGACCTTC...TACCTGTCCACCCTGAGTCCAGTGAGGCTGTCCCAAGAGCCCCTGTAGTGTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp CTACAGGGGCTCTTGGGACAGCCTCACTGGACTCAGGGTGGACAGGTAACGTACTTGGCCGTGCTGGACTaGTGGAAAGTGACCTCAAAG +
Preference number: 4 (lower is better)
Translates to: LQGLLGQPHWTQGGQVTYLAVLD*WKVTSK
Trigger: CTTTGAGGTCACTTTCCAGCAGTCCAGCACGGCCAA...GTACGTTACCTGTCCACCCTGAGTCCAGTGAGGCTGTCCCAAGAGCCCCTGTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp TTGCATTTTCTCCTGACCACGGCGAAGTCTCAACTCTGTCTACTTTCACAGCTGTGGCGCACGCGGAAGTaGACGGCCTCCATGACCCGC +
Preference number: 4 (lower is better)
Translates to: LHFLLTTAKSQLCLLSQLWRTRK*TASMTR
Trigger: GCGGGTCATGGAGGCCGTGCACTTCCGCGTGCGCCA...CAGCTGTGAAAGTAGACAGAGTTGAGACTTCGCCGTGGTCAGGAGAAAATGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp CAGAGCGACTTGGACAGATGTGAGCTGACCTGCCTGGCGAGCTCCTTCTGCCTTAGATTTGCCTGGATTTaGCCTTCCTGGGGTTCCCTC +
Preference number: 4 (lower is better)
Translates to: QSDLDRCELTCLASSFCLRFAWI*PSWGSL
Trigger: GAGGGAACCCCAGGAAGGGCAAATCCAGGCAAATCT...AAGGCAGAAGGAGCTCGCCAGGCAGGTCAGCTCACATCTGTCCAAGTCGCTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp TTGCATTTTCTCCTGACCACGGCGAAGTCTCAACTCTGTCTACTTTCACAGCTGGGGGCTCCGGTTCCCTaGCCTGAAGCTGTGCTCCGG +
Preference number: 4 (lower is better)
Translates to: LHFLLTTAKSQLCLLSQLGAPVP*PEAVLR
Trigger: CCGGAGCACAGCTTCAGGGCAGGGAACCGGAGCCCC...CAGCTGTGAAAGTAGACAGAGTTGAGACTTCGCCGTGGTCAGGAGAAAATGCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp CCCCAAGAGATGGGTGTGGTGCCTGGGGCATGGGTCTTAGCCTTTCTGGTCTCATGTCTAACCTTGCTGTaGCCTGAGGGGCTTAACTGC +
Preference number: 4 (lower is better)
Translates to: PQEMGVVPGAWVLAFLVSCLTLL*PEGLNC
Trigger: GCAGTTAAGCCCCTCAGGGCACAGCAAGGTTAGACA...TGAGACCAGAAAGGCTAAGACCCATGCCCCAGGCACCACACCCATCTCTTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp ATGGCAATAAGATGGAGAGCTGAGGTGACATGCAGCTGGGGTGGCTGCGCCACCTGTCTAACCTTGCTGTaGCCTGAGGGGCTTAACTGC +
Preference number: 4 (lower is better)
Translates to: MAIRWRAEVTCSWGGCATCLTLL*PEGLNC
Trigger: GCAGTTAAGCCCCTCAGGGCACAGCAAGGTTAGACA...GGTGGCGCAGCCACCCCAGCTGCATGTCACCTCAGCTCTCCATCTTATTGCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp GGAAGGACCTCGCCTGGTTGGGAGATGACAGTCTCTAGGATGAAGCCTGGAAGTAGATGTGAGCTGACCTaGCTGGCGAGCTCCTTCTGC +
Preference number: 4 (lower is better)
Translates to: GRTSPGWEMTVSRMKPGSRCELT*LASSFC
Trigger: GCAGAAGGAGCTCGCCAGGCAGGTCAGCTCACATCT...ACTTCCAGGCTTCATCCTAGAGACTGTCATCTCCCAACCAGGCGAGGTCCTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp GAAGGTGGCCGTGGCAAGGGAGGAGCTGCTCCCATGGCAGAGCATTCCTGCAGAAGGAGTGGATGTTTGTaGGTTGGAGACACTGACTGT +
Preference number: 4 (lower is better)
Translates to: EGGRGKGGAAPMAEHSCRRSGCL*VGDTDC
Trigger: ACAGTCAGTGTCTCCAACGCACAAACATCCACTCCT...TCTGCAGGAATGCTCTGCCATGGGAGCAGCTCCTCCCTTGCCACGGCCACCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp CCCCAAGAGATGGGTGTGGTGCCTGGGGCATGGGTCTTAGCCTTTCTGGTCTCAGAAGTAGGTGCTGTCTaGTTCCAGAGAGCTCCAGAG +
Preference number: 4 (lower is better)
Translates to: PQEMGVVPGAWVLAFLVSEVGAV*FQRAPE
Trigger: CTCTGGAGCTCTCTGGAACCAGACAGCACCTACTTC...TGAGACCAGAAAGGCTAAGACCCATGCCCCAGGCACCACACCCATCTCTTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp GCCCTTCCCAGGAGCACACTACAGGGGCTCTTGGGACAGCCTCACTGGACTCAGCTCAGCAGATTGAACTaGGCCATGACAGATGTAGTC +
Preference number: 4 (lower is better)
Translates to: ALPRSTLQGLLGQPHWTQLSRLN*AMTDVV
Trigger: GACTACATCTGTCATGGCCCAGTTCAATCTGCTGAG...CTGAGTCCAGTGAGGCTGTCCCAAGAGCCCCTGTAGTGTGCTCCTGGGAAGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp CCTCACTGGACTCAGGGTGGACAGGTAACGTACCTAAGAAACAAATCAACAAGCGGCGGTGCCTGGGGGTaGCGGGGTGGACACCTTGAT +
Preference number: 4 (lower is better)
Translates to: PHWTQGGQVTYLRNKSTSGGAWG*RGGHLD
Trigger: ATCAAGGTGTCCACCCCGCCACCCCCAGGCACCGCC...GCTTGTTGATTTGTTTCTTAGGTACGTTACCTGTCCACCCTGAGTCCAGTGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp TTTCACAGCTGCTTCTCCAGTGCAAGGAGGCTGCATGGGCTCCCTAGACAGGTGATAGGAGTCCACCAGTaGCTGCGGCACCAACTCCAT +
Preference number: 4 (lower is better)
Translates to: FHSCFSSARRLHGLPRQVIGVHQ*LRHQLH
Trigger: ATGGAGTTGGTGCCGCAGCCACTGGTGGACTCCTAT...CACCTGTCTAGGGAGCCCATGCAGCCTCCTTGCACTGGAGAAGCAGCTGTGAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp TTGCATTTTCTCCTGACCACGGCGAAGTCTCAACTCTGTCTACTTTCACAGCTGCCCCTGAGCCGCCGATaGAGATGGTGGCCGCGTTGC +
Preference number: 4 (lower is better)
Translates to: LHFLLTTAKSQLCLLSQLPLSRR*RWWPRC
Trigger: GCAACGCGGCCACCATCTCCATCGGCGGCTCAGGGG...CAGCTGTGAAAGTAGACAGAGTTGAGACTTCGCCGTGGTCAGGAGAAAATGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp GCAGAGAGAGTCCCCAGCCCCCGGCGCGGGCAAGACGCAGTTAGGGACATTCCCTCGCAAAATACTTTTTaGCAGTCCATCAGCAAAGAG +
Preference number: 4 (lower is better)
Translates to: AERVPSPRRGQDAVRDIPSQNTF*QSISKE
Trigger: CTCTTTGCTGATGGACTGCCAAAAAGTATTTTGCGA...GGGAATGTCCCTAACTGCGTCTTGCCCGCGCCGGGGGCTGGGGACTCTCTCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp GGCCTGGTGGGAACGCTGGGGGAATGGGGGAGAGTCGCTGTTTCTGACCAGAGCATTTCAGCAACACTGTaGTTGTTGTTAGGGGCAGGA +
Preference number: 4 (lower is better)
Translates to: GLVGTLGEWGRVAVSDQSISATL*LLLGAG
Trigger: TCCTGCCCCTAACAACAACCACAGTGTTGCTGAAAT...GCTCTGGTCAGAAACAGCGACTCTCCCCCATTCCCCCAGCGTTCCCACCAGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp GGACCTTGCCTTTCCCCGGGCACAGCCCGAAGGTCCTGCCTCCTGAGGCAGTTTATTTCAGCAACACTGTaGTTGTTGTTAGGGGCAGGA +
Preference number: 4 (lower is better)
Translates to: GPCLSPGTARRSCLLRQFISATL*LLLGAG
Trigger: TCCTGCCCCTAACAACAACCACAGTGTTGCTGAAAT...AAACTGCCTCAGGAGGCAGGACCTTCGGGCTGTGCCCGGGGAAAGGCAAGGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp GGAAGGACCTCGCCTGGTTGGGAGATGACAGTCTCTAGGATGAAGCCTGGAAGTTCAGCTTCCTCAGCCTaGCTCATGGGCGCTAGGTTG +
Preference number: 4 (lower is better)
Translates to: GRTSPGWEMTVSRMKPGSSASSA*LMGARL
Trigger: CAACCTAGCGCCCATGAGCCAGGCTGAGGAAGCTGA...ACTTCCAGGCTTCATCCTAGAGACTGTCATCTCCCAACCAGGCGAGGTCCTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp CTTCAGGAGGTGGCCTCGGGTAGCAGGTGCCCAGCCCCCAAGAGATGGGTGTGGAAAATGGCAATAAGATaGAGAGCTGAGGTGACATGC +
Preference number: 4 (lower is better)
Translates to: LQEVASGSRCPAPKRWVWKMAIR*RAEVTC
Trigger: GCATGTCACCTCAGCTCTCCATCTTATTGCCATTTT...CCACACCCATCTCTTGGGGGCTGGGCACCTGCTACCCGAGGCCACCTCCTGAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp GGAAGGACCTCGCCTGGTTGGGAGATGACAGTCTCTAGGATGAAGCCTGGAAGTGATGGGTGTGGTGCCTaGGGCATGGGTCTTAGCCTT +
Preference number: 4 (lower is better)
Translates to: GRTSPGWEMTVSRMKPGSDGCGA*GMGLSL
Trigger: AAGGCTAAGACCCATGCCCCAGGCACCACACCCATC...ACTTCCAGGCTTCATCCTAGAGACTGTCATCTCCCAACCAGGCGAGGTCCTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp GCCCTTCCCAGGAGCACACTACAGGGGCTCTTGGGACAGCCTCACTGGACTCAGCTGGTAACAGAGGAGTaGATGTTTGTGCGTTGGAGA +
Preference number: 4 (lower is better)
Translates to: ALPRSTLQGLLGQPHWTQLVTEE*MFVRWR
Trigger: TCTCCAACGCACAAACATCCACTCCTCTGTTACCAG...CTGAGTCCAGTGAGGCTGTCCCAAGAGCCCCTGTAGTGTGCTCCTGGGAAGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR TCA 90 bp GGAAGGACCTCGCCTGGTTGGGAGATGACAGTCTCTAGGATGAAGCCTGGAAGTTGGACTGCTGGAAAGTaGCCTCAAAGTGGTGGGGTC +
Preference number: 4 (lower is better)
Translates to: GRTSPGWEMTVSRMKPGSWTAGK*PQSGGV
Trigger: GACCCCACCACTTTGAGGTCACTTTCCAGCAGTCCA...ACTTCCAGGCTTCATCCTAGAGACTGTCATCTCCCAACCAGGCGAGGTCCTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR TCA 90 bp CCTCACTGGACTCAGGGTGGACAGGTAACGTACCTAAGAAACAAATCAACAAGCAGTGCACGGCCTCCATaGCCCGCTGGCGCTGCAGTT +
Preference number: 4 (lower is better)
Translates to: PHWTQGGQVTYLRNKSTSSARPP*PAGAAV
Trigger: AACTGCAGCGCCAGCGGGTCATGGAGGCCGTGCACT...GCTTGTTGATTTGTTTCTTAGGTACGTTACCTGTCCACCCTGAGTCCAGTGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR TCA 90 bp GGACCTTGCCTTTCCCCGGGCACAGCCCGAAGGTCCTGCCTCCTGAGGCAGTTTGTTAGGGACATTCCCTaGAAATACACTGGTGTTTCA +
Preference number: 4 (lower is better)
Translates to: GPCLSPGTARRSCLLRQFVRDIP*KYTGVS
Trigger: TGAAACACCAGTGTATTTTCAGGGAATGTCCCTAAC...AAACTGCCTCAGGAGGCAGGACCTTCGGGCTGTGCCCGGGGAAAGGCAAGGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR TCA 90 bp GGAAGGACCTCGCCTGGTTGGGAGATGACAGTCTCTAGGATGAAGCCTGGAAGTGAGAGTCGCTGTTTCTaGCCAGAGCGACTTGGACAG +
Preference number: 4 (lower is better)
Translates to: GRTSPGWEMTVSRMKPGSESRCF*PERLGQ
Trigger: CTGTCCAAGTCGCTCTGGTCAGAAACAGCGACTCTC...ACTTCCAGGCTTCATCCTAGAGACTGTCATCTCCCAACCAGGCGAGGTCCTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR TCA 90 bp TTTCACAGCTGCTTCTCCAGTGCAAGGAGGCTGCATGGGCTCCCTAGACAGGTGACTGACTGTTCTGAGTaGCAAGTGGCTCTGTGCCAG +
Preference number: 4 (lower is better)
Translates to: FHSCFSSARRLHGLPRQVTDCSE*QVALCQ
Trigger: CTGGCACAGAGCCACTTGTCACTCAGAACAGTCAGT...CACCTGTCTAGGGAGCCCATGCAGCCTCCTTGCACTGGAGAAGCAGCTGTGAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp GGACGGTGGGAGAGGGATGCCTGCGTCTTCGTAGACCAGGTACCTGCGGCAACACCTGAGGGGCTTAACTaGTTTTTCTGGGAGATGTTA +
Preference number: 4 (lower is better)
Translates to: GRWERDACVFVDQVPAATPEGLN*FFWEML
Trigger: TAACATCTCCCAGAAAAAGCAGTTAAGCCCCTCAGG...TGTTGCCGCAGGTACCTGGTCTACGAAGACGCAGGCATCCCTCTCCCACCGTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp GCATTCCTGCAGATTTGCCTGGATTTGCCCTTCCTGGGGTTCCCTCTAGGCTTCAGGGCAGCTTGTTCATaGCCCCGTGCACCTTGTTCA +
Preference number: 4 (lower is better)
Translates to: AFLQICLDLPFLGFPLGFRAACS*PRAPCS
Trigger: TGAACAAGGTGCACGGGGGCATGAACAAGCTGCCCT...GAAGCCTAGAGGGAACCCCAGGAAGGGCAAATCCAGGCAAATCTGCAGGAATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378288.8
ENST00000378295.9
CDS-3UTR CCA 90 bp GGAAGGACCTCGCCTGGTTGGGAGATGACAGTCTCTAGGATGAAGCCTGGAAGTGATGAGGTGGCTGGCTaGAGCAGACTGTCCTTCGTT +
Preference number: 4 (lower is better)
Translates to: GRTSPGWEMTVSRMKPGSDEVAG*SRLSFV
Trigger: AACGAAGGACAGTCTGCTCCAGCCAGCCACCTCATC...ACTTCCAGGCTTCATCCTAGAGACTGTCATCTCCCAACCAGGCGAGGTCCTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp TTGCATTTTCTCCTGACCACGGCGAAGTCTCAACTCTGTCTACTTTCACAGCTGGCAGGCCCCGCCAGATaGTCATGCGGTACTGCTCGG +
Preference number: 4 (lower is better)
Translates to: LHFLLTTAKSQLCLLSQLAGPAR*SCGTAR
Trigger: CCGAGCAGTACCGCATGACCATCTGGCGGGGCCTGC...CAGCTGTGAAAGTAGACAGAGTTGAGACTTCGCCGTGGTCAGGAGAAAATGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp GGACCTTGCCTTTCCCCGGGCACAGCCCGAAGGTCCTGCCTCCTGAGGCAGTTTTCCCTGAAAATACACTaGTGTTTCAGACACAGTCAC +
Preference number: 4 (lower is better)
Translates to: GPCLSPGTARRSCLLRQFSLKIH*CFRHSH
Trigger: GTGACTGTGTCTGAAACACCAGTGTATTTTCAGGGA...AAACTGCCTCAGGAGGCAGGACCTTCGGGCTGTGCCCGGGGAAAGGCAAGGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp GAAGGTGGCCGTGGCAAGGGAGGAGCTGCTCCCATGGCAGAGCATTCCTGCAGAATTTCAGCAACACTGTaGTTGTTGTTAGGGGCAGGA +
Preference number: 4 (lower is better)
Translates to: EGGRGKGGAAPMAEHSCRISATL*LLLGAG
Trigger: TCCTGCCCCTAACAACAACCACAGTGTTGCTGAAAT...TCTGCAGGAATGCTCTGCCATGGGAGCAGCTCCTCCCTTGCCACGGCCACCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp GCCCTTCCCAGGAGCACACTACAGGGGCTCTTGGGACAGCCTCACTGGACTCAGATTTCAGCAACACTGTaGTTGTTGTTAGGGGCAGGA +
Preference number: 4 (lower is better)
Translates to: ALPRSTLQGLLGQPHWTQISATL*LLLGAG
Trigger: TCCTGCCCCTAACAACAACCACAGTGTTGCTGAAAT...CTGAGTCCAGTGAGGCTGTCCCAAGAGCCCCTGTAGTGTGCTCCTGGGAAGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp CTACAGGGGCTCTTGGGACAGCCTCACTGGACTCAGGGTGGACAGGTAACGTACTCACTGGACTCAGGGTaGACAGGTAACGTACCTAAG +
Preference number: 4 (lower is better)
Translates to: LQGLLGQPHWTQGGQVTYSLDSG*TGNVPK
Trigger: CTTAGGTACGTTACCTGTCCACCCTGAGTCCAGTGA...GTACGTTACCTGTCCACCCTGAGTCCAGTGAGGCTGTCCCAAGAGCCCCTGTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp GCATTCCTGCAGATTTGCCTGGATTTGCCCTTCCTGGGGTTCCCTCTAGGCTTCTTGGGACAGCCTCACTaGACTCAGGGTGGACAGGTA +
Preference number: 4 (lower is better)
Translates to: AFLQICLDLPFLGFPLGFLGQPH*TQGGQV
Trigger: TACCTGTCCACCCTGAGTCCAGTGAGGCTGTCCCAA...GAAGCCTAGAGGGAACCCCAGGAAGGGCAAATCCAGGCAAATCTGCAGGAATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp CCTCACTGGACTCAGGGTGGACAGGTAACGTACCTAAGAAACAAATCAACAAGCGCCTGGTGGGAACGCTaGGGGAATGGGGGAGAGTCG +
Preference number: 4 (lower is better)
Translates to: PHWTQGGQVTYLRNKSTSAWWER*GNGGES
Trigger: CGACTCTCCCCCATTCCCCCAGCGTTCCCACCAGGC...GCTTGTTGATTTGTTTCTTAGGTACGTTACCTGTCCACCCTGAGTCCAGTGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp CAGAGCGACTTGGACAGATGTGAGCTGACCTGCCTGGCGAGCTCCTTCTGCCTTGTTCTGAGTGACAAGTaGCTCTGTGCCAGGATACTG +
Preference number: 4 (lower is better)
Translates to: QSDLDRCELTCLASSFCLVLSDK*LCARIL
Trigger: CAGTATCCTGGCACAGAGCCACTTGTCACTCAGAAC...AAGGCAGAAGGAGCTCGCCAGGCAGGTCAGCTCACATCTGTCCAAGTCGCTCTG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp GTGCTCCGGGACGGTCAAGGTTCGGCCACCAAGGCTCAGGCTGCTCCTCGTGGACACGAAAAACACGGATaGGATTTCGTTTTCACCTTA +
Preference number: 4 (lower is better)
Translates to: VLRDGQGSATKAQAAPRGHEKHG*DFVFTL
Trigger: TAAGGTGAAAACGAAATCCCATCCGTGTTTTTCGTG...TCCACGAGGAGCAGCCTGAGCCTTGGTGGCCGAACCTTGACCGTCCCGGAGCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp GCGGTTGGGGATGGTGATGGTGTGGCGCACGCGGAAGTGCACGGCCTCCATGACCACGAAAAACACGGATaGGATTTCGTTTTCACCTTA +
Preference number: 4 (lower is better)
Translates to: AVGDGDGVAHAEVHGLHDHEKHG*DFVFTL
Trigger: TAAGGTGAAAACGAAATCCCATCCGTGTTTTTCGTG...GTCATGGAGGCCGTGCACTTCCGCGTGCGCCACACCATCACCATCCCCAACCGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000604074.5
CDS-3UTR CCA 90 bp GTGCTCCGGGACGGTCAAGGTTCGGCCACCAAGGCTCAGGCTGCTCCTCGTGGACAGTTGTTATGTCATTaGAGGGCGTCCATTAATACT +
Preference number: 4 (lower is better)
Translates to: VLRDGQGSATKAQAAPRGQLLCH*RASINT
Trigger: AGTATTAATGGACGCCCTCCAATGACATAACAACTG...TCCACGAGGAGCAGCCTGAGCCTTGGTGGCCGAACCTTGACCGTCCCGGAGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp GGGCAGGAAGGAGGCGGTCCTGCAGAATACAGCGTGCTGGGGGCAGAGGCCAGTCAGTTGTTATGTCATTaGAGGGCGTCCATTAATACT +
Preference number: 4 (lower is better)
Translates to: GQEGGGPAEYSVLGAEASQLLCH*RASINT
Trigger: AGTATTAATGGACGCCCTCCAATGACATAACAACTG...ACTGGCCTCTGCCCCCAGCACGCTGTATTCTGCAGGACCGCCTCCTTCCTGCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp GCATTCCTGCAGATTTGCCTGGATTTGCCCTTCCTGGGGTTCCCTCTAGGCTTCTTGGCTGGCACTGCGTaGCCATGGTTGTTGAGCATC +
Preference number: 4 (lower is better)
Translates to: AFLQICLDLPFLGFPLGFLAGTA*PWLLSI
Trigger: GATGCTCAACAACCATGGCCACGCAGTGCCAGCCAA...GAAGCCTAGAGGGAACCCCAGGAAGGGCAAATCCAGGCAAATCTGCAGGAATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
CDS-3UTR TCA 90 bp AGGCCCTCAGTGGATCTCGGCCTCCGTGAACTCCTCCTTGATGGGCTGCTTGCGGTTAGGGACATTCCCTaGAAATACACTGGTGTTTCA +
Preference number: 4 (lower is better)
Translates to: RPSVDLGLRELLLDGLLAVRDIP*KYTGVS
Trigger: TGAAACACCAGTGTATTTTCAGGGAATGTCCCTAAC...CGCAAGCAGCCCATCAAGGAGGAGTTCACGGAGGCCGAGATCCACTGAGGGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604074.5
CDS-3UTR TCA 90 bp TTTCACAGCTGCTTCTCCAGTGCAAGGAGGCTGCATGGGCTCCCTAGACAGGTGTCATGGGCGCTAGGTTaGACTCCAAAGAGAATGCTG +
Preference number: 4 (lower is better)
Translates to: FHSCFSSARRLHGLPRQVSWALG*TPKRML
Trigger: CAGCATTCTCTTTGGAGTTCAACCTAGCGCCCATGA...CACCTGTCTAGGGAGCCCATGCAGCCTCCTTGCACTGGAGAAGCAGCTGTGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR TCA 90 bp GCATTCCTGCAGATTTGCCTGGATTTGCCCTTCCTGGGGTTCCCTCTAGGCTTCACTGACTGTTCTGAGTaGCAAGTGGCTCTGTGCCAG +
Preference number: 4 (lower is better)
Translates to: AFLQICLDLPFLGFPLGFTDCSE*QVALCQ
Trigger: CTGGCACAGAGCCACTTGTCACTCAGAACAGTCAGT...GAAGCCTAGAGGGAACCCCAGGAAGGGCAAATCCAGGCAAATCTGCAGGAATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR TCA 90 bp TCCATTAATACTGCTCGGAGAAGCACGATCTTACACGAAAAACACGGATGGGATCGTGGCCATGGTTGTTaGGCATCCCGGGGCCCACGG +
Preference number: 4 (lower is better)
Translates to: SINTARRSTILHEKHGWDRGHGC*ASRGPR
Trigger: CCGTGGGCCCCGGGATGCTCAACAACCATGGCCACG...ATCCCATCCGTGTTTTTCGTGTAAGATCGTGCTTCTCCGAGCAGTATTAATGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378288.8
ENST00000378295.9
CDS-3UTR GCA 90 bp TCCATTAATACTGCTCGGAGAAGCACGATCTTACACGAAAAACACGGATGGGATCCGAGGCCGCGCGGCTaGTCATCTGGTCCATGGTGC +
Preference number: 4 (lower is better)
Translates to: SINTARRSTILHEKHGWDPRPRG*SSGPWC
Trigger: GCACCATGGACCAGATGAGCAGCCGCGCGGCCTCGG...ATCCCATCCGTGTTTTTCGTGTAAGATCGTGCTTCTCCGAGCAGTATTAATGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp CACACTACAGGGGCTCTTGGGACAGCCTCACTGGACTCAGGGTGGACAGGTAACGGGTCATCCACATACTaGGAGAGATTATTGCCTTCC +
Preference number: 4 (lower is better)
Translates to: HTTGALGTASLDSGWTGNGSSTY*ERLLPS
Trigger: GGAAGGCAATAATCTCTCGCAGTATGTGGATGACCC...GTTACCTGTCCACCCTGAGTCCAGTGAGGCTGTCCCAAGAGCCCCTGTAGTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp CCTCACTGGACTCAGGGTGGACAGGTAACGTACCTAAGAAACAAATCAACAAGCTGGGCCGCCGGTTCATaGCCCCTACACAGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: PHWTQGGQVTYLRNKSTSWAAGS*PLHSCC
Trigger: ACAGCAGCTGTGTAGGGGGCATGAACCGGCGGCCCA...GCTTGTTGATTTGTTTCTTAGGTACGTTACCTGTCCACCCTGAGTCCAGTGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp TGTTTCAGACACAGTCACTTGGCTGCTCACTACTATCCAGAACCAAAAGATGTCGTGTGGAGCTGGCCGTaGCAGAAGGGGCCAGGCAGC +
Preference number: 4 (lower is better)
Translates to: CFRHSHLAAHYYPEPKDVVWSWP*QKGPGS
Trigger: GCTGCCTGGCCCCTTCTGGCACGGCCAGCTCCACAC...GACATCTTTTGGTTCTGGATAGTAGTGAGCAGCCAAGTGACTGTGTCTGAAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp AAAGATGTCGCAAAATACTTTTTGGCAGTCCATCAGCAAAGAGGATCCTTTCCTGCACCCAGGCGACTGTaGTGTCAGCGGCCCCCGGGG +
Preference number: 4 (lower is better)
Translates to: KDVAKYFLAVHQQRGSFPAPRRL*CQRPPG
Trigger: CCCCGGGGGCCGCTGACAGCACAGTCGCCTGGGTGC...AGGAAAGGATCCTCTTTGCTGATGGACTGCCAAAAAGTATTTTGCGACATCTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp TCCATTAATACTGCTCGGAGAAGCACGATCTTACACGAAAAACACGGATGGGATAGTGGGTGGGCACGCTaGCGGCGTGCTCTGGGGTGT +
Preference number: 4 (lower is better)
Translates to: SINTARRSTILHEKHGWDSGWAR*RRALGC
Trigger: ACACCCCAGAGCACGCCGCCAGCGTGCCCACCCACT...ATCCCATCCGTGTTTTTCGTGTAAGATCGTGCTTCTCCGAGCAGTATTAATGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp CCTCACTGGACTCAGGGTGGACAGGTAACGTACCTAAGAAACAAATCAACAAGCCGTCCCCACCTGTGGTaGCTCATAGGGCACCACGAC +
Preference number: 4 (lower is better)
Translates to: PHWTQGGQVTYLRNKSTSRPHLW*LIGHHD
Trigger: GTCGTGGTGCCCTATGAGCCACCACAGGTGGGGACG...GCTTGTTGATTTGTTTCTTAGGTACGTTACCTGTCCACCCTGAGTCCAGTGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp TCCATTAATACTGCTCGGAGAAGCACGATCTTACACGAAAAACACGGATGGGATGGCAGCTTGGGTCTCTaGGCGGTGGCGCAGGCTGCA +
Preference number: 4 (lower is better)
Translates to: SINTARRSTILHEKHGWDGSLGL*AVAQAA
Trigger: TGCAGCCTGCGCCACCGCCCAGAGACCCAAGCTGCC...ATCCCATCCGTGTTTTTCGTGTAAGATCGTGCTTCTCCGAGCAGTATTAATGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp CTACAGGGGCTCTTGGGACAGCCTCACTGGACTCAGGGTGGACAGGTAACGTACTCAGACACAGTCACTTaGCTGCTCACTACTATCCAG +
Preference number: 4 (lower is better)
Translates to: LQGLLGQPHWTQGGQVTYSDTVT*LLTTIQ
Trigger: CTGGATAGTAGTGAGCAGCCAAGTGACTGTGTCTGA...GTACGTTACCTGTCCACCCTGAGTCCAGTGAGGCTGTCCCAAGAGCCCCTGTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp GGCCTGGTGGGAACGCTGGGGGAATGGGGGAGAGTCGCTGTTTCTGACCAGAGCCTTAACTGCTTTTTCTaGGAGATGTTAGTAGGGGAA +
Preference number: 4 (lower is better)
Translates to: GLVGTLGEWGRVAVSDQSLNCFF*EMLVGE
Trigger: TTCCCCTACTAACATCTCCCAGAAAAAGCAGTTAAG...GCTCTGGTCAGAAACAGCGACTCTCCCCCATTCCCCCAGCGTTCCCACCAGGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp CCTCACTGGACTCAGGGTGGACAGGTAACGTACCTAAGAAACAAATCAACAAGCGAAGCACATCTGCGCTaGGCTGAGGAACCCCGGGTG +
Preference number: 4 (lower is better)
Translates to: PHWTQGGQVTYLRNKSTSEAHLR*AEEPRV
Trigger: CACCCGGGGTTCCTCAGCCCAGCGCAGATGTGCTTC...GCTTGTTGATTTGTTTCTTAGGTACGTTACCTGTCCACCCTGAGTCCAGTGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp CAGAGCGACTTGGACAGATGTGAGCTGACCTGCCTGGCGAGCTCCTTCTGCCTTCTGGTAACAGAGGAGTaGATGTTTGTGCGTTGGAGA +
Preference number: 4 (lower is better)
Translates to: QSDLDRCELTCLASSFCLLVTEE*MFVRWR
Trigger: TCTCCAACGCACAAACATCCACTCCTCTGTTACCAG...AAGGCAGAAGGAGCTCGCCAGGCAGGTCAGCTCACATCTGTCCAAGTCGCTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp AGCACACTACAGGGGCTCTTGGGACAGCCTCACTGGACTCAGGGTGGACAGGTACTGGTAACAGAGGAGTaGATGTTTGTGCGTTGGAGA +
Preference number: 4 (lower is better)
Translates to: STLQGLLGQPHWTQGGQVLVTEE*MFVRWR
Trigger: TCTCCAACGCACAAACATCCACTCCTCTGTTACCAG...TACCTGTCCACCCTGAGTCCAGTGAGGCTGTCCCAAGAGCCCCTGTAGTGTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp GGCCTGGTGGGAACGCTGGGGGAATGGGGGAGAGTCGCTGTTTCTGACCAGAGCCAGTTGTTATGTCATTaGAGGGCGTCCATTAATACT +
Preference number: 4 (lower is better)
Translates to: GLVGTLGEWGRVAVSDQSQLLCH*RASINT
Trigger: AGTATTAATGGACGCCCTCCAATGACATAACAACTG...GCTCTGGTCAGAAACAGCGACTCTCCCCCATTCCCCCAGCGTTCCCACCAGGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR TCA 90 bp GTCGCAAAATACTTTTTGGCAGTCCATCAGCAAAGAGGATCCTTTCCTTTGGAACGCGGTTGGGGATGGTaGTGGTGTGGCGCACGCGGA +
Preference number: 4 (lower is better)
Translates to: VAKYFLAVHQQRGSFPLERGWGW*WCGARG
Trigger: TCCGCGTGCGCCACACCATCACCATCCCCAACCGCG...TTCCAAAGGAAAGGATCCTCTTTGCTGATGGACTGCCAAAAAGTATTTTGCGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR TCA 90 bp TGTTTCAGACACAGTCACTTGGCTGCTCACTACTATCCAGAACCAAAAGATGTCCCCACCTGCCTGCAATaGAGGGCCTCGTCACACCCG +
Preference number: 4 (lower is better)
Translates to: CFRHSHLAAHYYPEPKDVPTCLQ*RASSHP
Trigger: CGGGTGTGACGAGGCCCTTCATTGCAGGCAGGTGGG...GACATCTTTTGGTTCTGGATAGTAGTGAGCAGCCAAGTGACTGTGTCTGAAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp GTCGCAAAATACTTTTTGGCAGTCCATCAGCAAAGAGGATCCTTTCCTTTGGAACCGAGGCCGCGCGGCTaGTCATCTGGTCCATGGTGC +
Preference number: 4 (lower is better)
Translates to: VAKYFLAVHQQRGSFPLEPRPRG*SSGPWC
Trigger: GCACCATGGACCAGATGAGCAGCCGCGCGGCCTCGG...TTCCAAAGGAAAGGATCCTCTTTGCTGATGGACTGCCAAAAAGTATTTTGCGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp TGTTTCAGACACAGTCACTTGGCTGCTCACTACTATCCAGAACCAAAAGATGTCGGCACCACGACGCTCTaGCTGCCGGTGACAGGGTCA +
Preference number: 4 (lower is better)
Translates to: CFRHSHLAAHYYPEPKDVGTTTL*LPVTGS
Trigger: TGACCCTGTCACCGGCAGGCAGAGCGTCGTGGTGCC...GACATCTTTTGGTTCTGGATAGTAGTGAGCAGCCAAGTGACTGTGTCTGAAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp TCCATTAATACTGCTCGGAGAAGCACGATCTTACACGAAAAACACGGATGGGATGCTGCTTGCGGGCCTTaGAGTCGGGCAGGTCGAAGC +
Preference number: 4 (lower is better)
Translates to: SINTARRSTILHEKHGWDAACGP*SRAGRS
Trigger: GCTTCGACCTGCCCGACTGCAAGGCCCGCAAGCAGC...ATCCCATCCGTGTTTTTCGTGTAAGATCGTGCTTCTCCGAGCAGTATTAATGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp CCTCACTGGACTCAGGGTGGACAGGTAACGTACCTAAGAAACAAATCAACAAGCCTGCAGAATACAGCGTaGTGGGGGCAGAGGCCAGTC +
Preference number: 4 (lower is better)
Translates to: PHWTQGGQVTYLRNKSTSLQNTA*WGQRPV
Trigger: GACTGGCCTCTGCCCCCAGCACGCTGTATTCTGCAG...GCTTGTTGATTTGTTTCTTAGGTACGTTACCTGTCCACCCTGAGTCCAGTGAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp GGAAGGACCTCGCCTGGTTGGGAGATGACAGTCTCTAGGATGAAGCCTGGAAGTAGTCTGTTCCCTGACTaGCACCGCCTAGAAAGGAAA +
Preference number: 4 (lower is better)
Translates to: GRTSPGWEMTVSRMKPGSSLFPD*HRLERK
Trigger: TTTCCTTTCTAGGCGGTGGCAGTCAGGGAACAGACT...ACTTCCAGGCTTCATCCTAGAGACTGTCATCTCCCAACCAGGCGAGGTCCTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp TGTTTCAGACACAGTCACTTGGCTGCTCACTACTATCCAGAACCAAAAGATGTCCTGGGGCCATCTGGCTaGTCCGTGTTCTGGCCGGCT +
Preference number: 4 (lower is better)
Translates to: CFRHSHLAAHYYPEPKDVLGPSG*SVFWPA
Trigger: AGCCGGCCAGAACACGGAGCAGCCAGATGGCCCCAG...GACATCTTTTGGTTCTGGATAGTAGTGAGCAGCCAAGTGACTGTGTCTGAAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp TTTCACAGCTGCTTCTCCAGTGCAAGGAGGCTGCATGGGCTCCCTAGACAGGTGCTCAGCAGATTGAACTaGGCCATGACAGATGTAGTC +
Preference number: 4 (lower is better)
Translates to: FHSCFSSARRLHGLPRQVLSRLN*AMTDVV
Trigger: GACTACATCTGTCATGGCCCAGTTCAATCTGCTGAG...CACCTGTCTAGGGAGCCCATGCAGCCTCCTTGCACTGGAGAAGCAGCTGTGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp AAAGATGTCGCAAAATACTTTTTGGCAGTCCATCAGCAAAGAGGATCCTTTCCTCGTAGGGCGAGTGGGTaGGCACGCTGGCGGCGTGCT +
Preference number: 4 (lower is better)
Translates to: KDVAKYFLAVHQQRGSFPRRASG*ARWRRA
Trigger: AGCACGCCGCCAGCGTGCCCACCCACTCGCCCTACG...AGGAAAGGATCCTCTTTGCTGATGGACTGCCAAAAAGTATTTTGCGACATCTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp GTCGCAAAATACTTTTTGGCAGTCCATCAGCAAAGAGGATCCTTTCCTTTGGAAGGCGGTGCCTGGGGGTaGCGGGGTGGACACCTTGAT +
Preference number: 4 (lower is better)
Translates to: VAKYFLAVHQQRGSFPLEGGAWG*RGGHLD
Trigger: ATCAAGGTGTCCACCCCGCCACCCCCAGGCACCGCC...TTCCAAAGGAAAGGATCCTCTTTGCTGATGGACTGCCAAAAAGTATTTTGCGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp GGACGGTGGGAGAGGGATGCCTGCGTCTTCGTAGACCAGGTACCTGCGGCAACATCGCAAAATACTTTTTaGCAGTCCATCAGCAAAGAG +
Preference number: 4 (lower is better)
Translates to: GRWERDACVFVDQVPAATSQNTF*QSISKE
Trigger: CTCTTTGCTGATGGACTGCCAAAAAGTATTTTGCGA...TGTTGCCGCAGGTACCTGGTCTACGAAGACGCAGGCATCCCTCTCCCACCGTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp GAAGGTGGCCGTGGCAAGGGAGGAGCTGCTCCCATGGCAGAGCATTCCTGCAGATCGCAAAATACTTTTTaGCAGTCCATCAGCAAAGAG +
Preference number: 4 (lower is better)
Translates to: EGGRGKGGAAPMAEHSCRSQNTF*QSISKE
Trigger: CTCTTTGCTGATGGACTGCCAAAAAGTATTTTGCGA...TCTGCAGGAATGCTCTGCCATGGGAGCAGCTCCTCCCTTGCCACGGCCACCTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp TTGCATTTTCTCCTGACCACGGCGAAGTCTCAACTCTGTCTACTTTCACAGCTGTCAGGCTGCTCCTCGTaGATGGAGGTGGCCCCAGAA +
Preference number: 4 (lower is better)
Translates to: LHFLLTTAKSQLCLLSQLSGCSS*MEVAPE
Trigger: TTCTGGGGCCACCTCCATCCACGAGGAGCAGCCTGA...CAGCTGTGAAAGTAGACAGAGTTGAGACTTCGCCGTGGTCAGGAGAAAATGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp GCCCTTCCCAGGAGCACACTACAGGGGCTCTTGGGACAGCCTCACTGGACTCAGCTTAACTGCTTTTTCTaGGAGATGTTAGTAGGGGAA +
Preference number: 4 (lower is better)
Translates to: ALPRSTLQGLLGQPHWTQLNCFF*EMLVGE
Trigger: TTCCCCTACTAACATCTCCCAGAAAAAGCAGTTAAG...CTGAGTCCAGTGAGGCTGTCCCAAGAGCCCCTGTAGTGTGCTCCTGGGAAGGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp TCCATTAATACTGCTCGGAGAAGCACGATCTTACACGAAAAACACGGATGGGATGGAGCCGGAAGGAGCTaGAAGGAAGGGCCAGGCCCT +
Preference number: 4 (lower is better)
Translates to: SINTARRSTILHEKHGWDGAGRS*KEGPGP
Trigger: AGGGCCTGGCCCTTCCTTCCAGCTCCTTCCGGCTCC...ATCCCATCCGTGTTTTTCGTGTAAGATCGTGCTTCTCCGAGCAGTATTAATGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR TCA 90 bp GTCGCAAAATACTTTTTGGCAGTCCATCAGCAAAGAGGATCCTTTCCTTTGGAAGCTGTCCCTTTCTGCTaGGGGGTCCCCGAGGAGAGG +
Preference number: 4 (lower is better)
Translates to: VAKYFLAVHQQRGSFPLEAVPFC*GVPEER
Trigger: CCTCTCCTCGGGGACCCCTCAGCAGAAAGGGACAGC...TTCCAAAGGAAAGGATCCTCTTTGCTGATGGACTGCCAAAAAGTATTTTGCGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR TCA 90 bp TCCATTAATACTGCTCGGAGAAGCACGATCTTACACGAAAAACACGGATGGGATGGCCCACCAGCTGGTTaGCGGAGGGCAGCTTGTTCA +
Preference number: 4 (lower is better)
Translates to: SINTARRSTILHEKHGWDGPPAG*RRAACS
Trigger: TGAACAAGCTGCCCTCCGTCAACCAGCTGGTGGGCC...ATCCCATCCGTGTTTTTCGTGTAAGATCGTGCTTCTCCGAGCAGTATTAATGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378288.8
ENST00000378295.9
CDS-3UTR GCA 90 bp TTGCATTTTCTCCTGACCACGGCGAAGTCTCAACTCTGTCTACTTTCACAGCTGAGAGAGCTCCAGAGGTaGTCAAACGTGGTGCCCCCA +
Preference number: 4 (lower is better)
Translates to: LHFLLTTAKSQLCLLSQLRELQR*SNVVPP
Trigger: TGGGGGCACCACGTTTGAGCACCTCTGGAGCTCTCT...CAGCTGTGAAAGTAGACAGAGTTGAGACTTCGCCGTGGTCAGGAGAAAATGCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp GTCGCAAAATACTTTTTGGCAGTCCATCAGCAAAGAGGATCCTTTCCTTTGGAAGCAGCTGCTGCGCGGTaGTGTAGTCGTGGCCCTGCT +
Preference number: 4 (lower is better)
Translates to: VAKYFLAVHQQRGSFPLEAAAAR*CSRGPA
Trigger: AGCAGGGCCACGACTACAGCACCGCGCAGCAGCTGC...TTCCAAAGGAAAGGATCCTCTTTGCTGATGGACTGCCAAAAAGTATTTTGCGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp GATCTTACACGAAAAACACGGATGGGATTTCGTTTTCACCTTAAAGCATTAAAGGGCGGTGGCGCAGGCTaGAGCCAGGCGAGGCCCTCA +
Preference number: 4 (lower is better)
Translates to: DLTRKTRMGFRFHLKALKGGGAG*SQARPS
Trigger: TGAGGGCCTCGCCTGGCTGCAGCCTGCGCCACCGCC...CTTTAATGCTTTAAGGTGAAAACGAAATCCCATCCGTGTTTTTCGTGTAAGATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp TTGCATTTTCTCCTGACCACGGCGAAGTCTCAACTCTGTCTACTTTCACAGCTGACAGCCCGAAGGTCCTaGCTCCTGAGGCAGTTTTGG +
Preference number: 4 (lower is better)
Translates to: LHFLLTTAKSQLCLLSQLTARRS*LLRQFW
Trigger: CCAAAACTGCCTCAGGAGGCAGGACCTTCGGGCTGT...CAGCTGTGAAAGTAGACAGAGTTGAGACTTCGCCGTGGTCAGGAGAAAATGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp TTGCATTTTCTCCTGACCACGGCGAAGTCTCAACTCTGTCTACTTTCACAGCTGATTGGCCCACCTGCCTaGAATGAAGGGCCTCGTCAC +
Preference number: 4 (lower is better)
Translates to: LHFLLTTAKSQLCLLSQLIGPPA*NEGPRH
Trigger: GTGACGAGGCCCTTCATTGCAGGCAGGTGGGCCAAT...CAGCTGTGAAAGTAGACAGAGTTGAGACTTCGCCGTGGTCAGGAGAAAATGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp AAAGATGTCGCAAAATACTTTTTGGCAGTCCATCAGCAAAGAGGATCCTTTCCTCAGGGGGTGTGGAGCTaGCCGTGCCAGAAGGGGCCA +
Preference number: 4 (lower is better)
Translates to: KDVAKYFLAVHQQRGSFPQGVWS*PCQKGP
Trigger: TGGCCCCTTCTGGCACGGCCAGCTCCACACCCCCTG...AGGAAAGGATCCTCTTTGCTGATGGACTGCCAAAAAGTATTTTGCGACATCTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp ATGGCAATAAGATGGAGAGCTGAGGTGACATGCAGCTGGGGTGGCTGCGCCACCAAAATGGCAATAAGATaGAGAGCTGAGGTGACATGC +
Preference number: 4 (lower is better)
Translates to: MAIRWRAEVTCSWGGCATKMAIR*RAEVTC
Trigger: GCATGTCACCTCAGCTCTCCATCTTATTGCCATTTT...GGTGGCGCAGCCACCCCAGCTGCATGTCACCTCAGCTCTCCATCTTATTGCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR TCA 90 bp CCTCACTGGACTCAGGGTGGACAGGTAACGTACCTAAGAAACAAATCAACAAGCTGGACTGCTGGAAAGTaGCCTCAAAGTGGTGGGGTC +
Preference number: 4 (lower is better)
Translates to: PHWTQGGQVTYLRNKSTSWTAGK*PQSGGV
Trigger: GACCCCACCACTTTGAGGTCACTTTCCAGCAGTCCA...GCTTGTTGATTTGTTTCTTAGGTACGTTACCTGTCCACCCTGAGTCCAGTGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR TCA 90 bp TCCATTAATACTGCTCGGAGAAGCACGATCTTACACGAAAAACACGGATGGGATCGCTCTGCCTGCCGGTaGCAGGGTCATCCACATACT +
Preference number: 4 (lower is better)
Translates to: SINTARRSTILHEKHGWDRSACR*QGHPHT
Trigger: AGTATGTGGATGACCCTGTCACCGGCAGGCAGAGCG...ATCCCATCCGTGTTTTTCGTGTAAGATCGTGCTTCTCCGAGCAGTATTAATGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR TCA 90 bp AAAGATGTCGCAAAATACTTTTTGGCAGTCCATCAGCAAAGAGGATCCTTTCCTCCCACCTGCCTGCAATaGAGGGCCTCGTCACACCCG +
Preference number: 4 (lower is better)
Translates to: KDVAKYFLAVHQQRGSFPPTCLQ*RASSHP
Trigger: CGGGTGTGACGAGGCCCTTCATTGCAGGCAGGTGGG...AGGAAAGGATCCTCTTTGCTGATGGACTGCCAAAAAGTATTTTGCGACATCTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp TTGCATTTTCTCCTGACCACGGCGAAGTCTCAACTCTGTCTACTTTCACAGCTGATGCCCTGTGGACCTTaGAGTGCTAGAGAAGGTGGC +
Preference number: 4 (lower is better)
Translates to: LHFLLTTAKSQLCLLSQLMPCGP*SAREGG
Trigger: GCCACCTTCTCTAGCACTGCAAGGTCCACAGGGCAT...CAGCTGTGAAAGTAGACAGAGTTGAGACTTCGCCGTGGTCAGGAGAAAATGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp GTCGCAAAATACTTTTTGGCAGTCCATCAGCAAAGAGGATCCTTTCCTTTGGAACCCAGAAAGGGCCTGTaGAGACTCTGTCTCCCCGGG +
Preference number: 4 (lower is better)
Translates to: VAKYFLAVHQQRGSFPLEPRKGL*RLCLPG
Trigger: CCCGGGGAGACAGAGTCTGCACAGGCCCTTTCTGGG...TTCCAAAGGAAAGGATCCTCTTTGCTGATGGACTGCCAAAAAGTATTTTGCGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp TCCATTAATACTGCTCGGAGAAGCACGATCTTACACGAAAAACACGGATGGGATCCTGCCCTGAAGCTGTaGTCCGGGACGGTCAAGGTT +
Preference number: 4 (lower is better)
Translates to: SINTARRSTILHEKHGWDPALKL*SGTVKV
Trigger: AACCTTGACCGTCCCGGAGCACAGCTTCAGGGCAGG...ATCCCATCCGTGTTTTTCGTGTAAGATCGTGCTTCTCCGAGCAGTATTAATGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp TGTTTCAGACACAGTCACTTGGCTGCTCACTACTATCCAGAACCAAAAGATGTCCCTGCCCTGAAGCTGTaGTCCGGGACGGTCAAGGTT +
Preference number: 4 (lower is better)
Translates to: CFRHSHLAAHYYPEPKDVPALKL*SGTVKV
Trigger: AACCTTGACCGTCCCGGAGCACAGCTTCAGGGCAGG...GACATCTTTTGGTTCTGGATAGTAGTGAGCAGCCAAGTGACTGTGTCTGAAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp AAAGATGTCGCAAAATACTTTTTGGCAGTCCATCAGCAAAGAGGATCCTTTCCTCTGGGGCCATCTGGCTaGTCCGTGTTCTGGCCGGCT +
Preference number: 4 (lower is better)
Translates to: KDVAKYFLAVHQQRGSFPLGPSG*SVFWPA
Trigger: AGCCGGCCAGAACACGGAGCAGCCAGATGGCCCCAG...AGGAAAGGATCCTCTTTGCTGATGGACTGCCAAAAAGTATTTTGCGACATCTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp TTGCATTTTCTCCTGACCACGGCGAAGTCTCAACTCTGTCTACTTTCACAGCTGAGGGCAGCTTGTTCATaGCCCCGTGCACCTTGTTCA +
Preference number: 4 (lower is better)
Translates to: LHFLLTTAKSQLCLLSQLRAACS*PRAPCS
Trigger: TGAACAAGGTGCACGGGGGCATGAACAAGCTGCCCT...CAGCTGTGAAAGTAGACAGAGTTGAGACTTCGCCGTGGTCAGGAGAAAATGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378288.8
ENST00000378295.9
CDS-3UTR CCA 90 bp CCTCACTGGACTCAGGGTGGACAGGTAACGTACCTAAGAAACAAATCAACAAGCACATGGTGTCGAAGGTaGAGCTGGGTTGTGCGTAGG +
Preference number: 4 (lower is better)
Translates to: PHWTQGGQVTYLRNKSTSTWCRR*SWVVRR
Trigger: CCTACGCACAACCCAGCTCCACCTTCGACACCATGT...GCTTGTTGATTTGTTTCTTAGGTACGTTACCTGTCCACCCTGAGTCCAGTGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp TCCATTAATACTGCTCGGAGAAGCACGATCTTACACGAAAAACACGGATGGGATTCCCGAGCTCGTGGTTaGGGCAGCGTTTCACGACGT +
Preference number: 4 (lower is better)
Translates to: SINTARRSTILHEKHGWDSRARG*GSVSRR
Trigger: ACGTCGTGAAACGCTGCCCCAACCACGAGCTCGGGA...ATCCCATCCGTGTTTTTCGTGTAAGATCGTGCTTCTCCGAGCAGTATTAATGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp TGTTTCAGACACAGTCACTTGGCTGCTCACTACTATCCAGAACCAAAAGATGTCTCCACGCGGATGAGGTaGCTGGCTGGAGCAGACTGT +
Preference number: 4 (lower is better)
Translates to: CFRHSHLAAHYYPEPKDVSTRMR*LAGADC
Trigger: ACAGTCTGCTCCAGCCAGCCACCTCATCCGCGTGGA...GACATCTTTTGGTTCTGGATAGTAGTGAGCAGCCAAGTGACTGTGTCTGAAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp TTGCATTTTCTCCTGACCACGGCGAAGTCTCAACTCTGTCTACTTTCACAGCTGGAGGAGCTGCTCCCATaGCAGAGCATTCCTGCAGAT +
Preference number: 4 (lower is better)
Translates to: LHFLLTTAKSQLCLLSQLEELLP*QSIPAD
Trigger: ATCTGCAGGAATGCTCTGCCATGGGAGCAGCTCCTC...CAGCTGTGAAAGTAGACAGAGTTGAGACTTCGCCGTGGTCAGGAGAAAATGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp CTACAGGGGCTCTTGGGACAGCCTCACTGGACTCAGGGTGGACAGGTAACGTACCTTAACTGCTTTTTCTaGGAGATGTTAGTAGGGGAA +
Preference number: 4 (lower is better)
Translates to: LQGLLGQPHWTQGGQVTYLNCFF*EMLVGE
Trigger: TTCCCCTACTAACATCTCCCAGAAAAAGCAGTTAAG...GTACGTTACCTGTCCACCCTGAGTCCAGTGAGGCTGTCCCAAGAGCCCCTGTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp AGCACACTACAGGGGCTCTTGGGACAGCCTCACTGGACTCAGGGTGGACAGGTACTTAACTGCTTTTTCTaGGAGATGTTAGTAGGGGAA +
Preference number: 4 (lower is better)
Translates to: STLQGLLGQPHWTQGGQVLNCFF*EMLVGE
Trigger: TTCCCCTACTAACATCTCCCAGAAAAAGCAGTTAAG...TACCTGTCCACCCTGAGTCCAGTGAGGCTGTCCCAAGAGCCCCTGTAGTGTGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp GATCTTACACGAAAAACACGGATGGGATTTCGTTTTCACCTTAAAGCATTAAAGGCCAGGCCCTCGCCCTaGCTGCAGCCAGATCCCCTG +
Preference number: 4 (lower is better)
Translates to: DLTRKTRMGFRFHLKALKARPSP*LQPDPL
Trigger: CAGGGGATCTGGCTGCAGCCAGGGCGAGGGCCTGGC...CTTTAATGCTTTAAGGTGAAAACGAAATCCCATCCGTGTTTTTCGTGTAAGATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp GATCTTACACGAAAAACACGGATGGGATTTCGTTTTCACCTTAAAGCATTAAAGCCCCGGGTGTCAGGATaGGCCCCCGCGGCTCCTGAA +
Preference number: 4 (lower is better)
Translates to: DLTRKTRMGFRFHLKALKPRVSG*APAAPE
Trigger: TTCAGGAGCCGCGGGGGCCCATCCTGACACCCGGGG...CTTTAATGCTTTAAGGTGAAAACGAAATCCCATCCGTGTTTTTCGTGTAAGATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp CTACAGGGGCTCTTGGGACAGCCTCACTGGACTCAGGGTGGACAGGTAACGTACCAGTTGTTATGTCATTaGAGGGCGTCCATTAATACT +
Preference number: 4 (lower is better)
Translates to: LQGLLGQPHWTQGGQVTYQLLCH*RASINT
Trigger: AGTATTAATGGACGCCCTCCAATGACATAACAACTG...GTACGTTACCTGTCCACCCTGAGTCCAGTGAGGCTGTCCCAAGAGCCCCTGTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR TCA 90 bp GATCTTACACGAAAAACACGGATGGGATTTCGTTTTCACCTTAAAGCATTAAAGCGGTGTTGGAGGGGATaGCAGGCGCCGGCGACATGG +
Preference number: 4 (lower is better)
Translates to: DLTRKTRMGFRFHLKALKRCWRG*QAPATW
Trigger: CCATGTCGCCGGCGCCTGTCATCCCCTCCAACACCG...CTTTAATGCTTTAAGGTGAAAACGAAATCCCATCCGTGTTTTTCGTGTAAGATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR TCA 90 bp CCTCACTGGACTCAGGGTGGACAGGTAACGTACCTAAGAAACAAATCAACAAGCAATAAGATGGAGAGCTaGGGTGACATGCAGCTGGGG +
Preference number: 4 (lower is better)
Translates to: PHWTQGGQVTYLRNKSTSNKMES*GDMQLG
Trigger: CCCCAGCTGCATGTCACCTCAGCTCTCCATCTTATT...GCTTGTTGATTTGTTTCTTAGGTACGTTACCTGTCCACCCTGAGTCCAGTGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR TCA 90 bp GTCGCAAAATACTTTTTGGCAGTCCATCAGCAAAGAGGATCCTTTCCTTTGGAACAAGCCCTCTGGAACTaGAGCACATCTGCGCTGGGC +
Preference number: 4 (lower is better)
Translates to: VAKYFLAVHQQRGSFPLEQALWN*STSALG
Trigger: GCCCAGCGCAGATGTGCTTCAGTTCCAGAGGGCTTG...TTCCAAAGGAAAGGATCCTCTTTGCTGATGGACTGCCAAAAAGTATTTTGCGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp GTCGCAAAATACTTTTTGGCAGTCCATCAGCAAAGAGGATCCTTTCCTTTGGAAGAGTCCACCAGTGGCTaGGGCACCAACTCCATCAGC +
Preference number: 4 (lower is better)
Translates to: VAKYFLAVHQQRGSFPLEESTSG*GTNSIS
Trigger: GCTGATGGAGTTGGTGCCGCAGCCACTGGTGGACTC...TTCCAAAGGAAAGGATCCTCTTTGCTGATGGACTGCCAAAAAGTATTTTGCGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp TGTTTCAGACACAGTCACTTGGCTGCTCACTACTATCCAGAACCAAAAGATGTCACAGCCCGAAGGTCCTaGCTCCTGAGGCAGTTTTGG +
Preference number: 4 (lower is better)
Translates to: CFRHSHLAAHYYPEPKDVTARRS*LLRQFW
Trigger: CCAAAACTGCCTCAGGAGGCAGGACCTTCGGGCTGT...GACATCTTTTGGTTCTGGATAGTAGTGAGCAGCCAAGTGACTGTGTCTGAAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp TCCATTAATACTGCTCGGAGAAGCACGATCTTACACGAAAAACACGGATGGGATATTGGCCCACCTGCCTaGAATGAAGGGCCTCGTCAC +
Preference number: 4 (lower is better)
Translates to: SINTARRSTILHEKHGWDIGPPA*NEGPRH
Trigger: GTGACGAGGCCCTTCATTGCAGGCAGGTGGGCCAAT...ATCCCATCCGTGTTTTTCGTGTAAGATCGTGCTTCTCCGAGCAGTATTAATGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp TGTTTCAGACACAGTCACTTGGCTGCTCACTACTATCCAGAACCAAAAGATGTCCTCCAACCCCTGCACTaGTGGGAAAACCATCCGCCT +
Preference number: 4 (lower is better)
Translates to: CFRHSHLAAHYYPEPKDVLQPLH*WENHPP
Trigger: AGGCGGATGGTTTTCCCAGCAGTGCAGGGGTTGGAG...GACATCTTTTGGTTCTGGATAGTAGTGAGCAGCCAAGTGACTGTGTCTGAAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp TCCATTAATACTGCTCGGAGAAGCACGATCTTACACGAAAAACACGGATGGGATGGAAGACGTCCATGCTaGAATCCGTTCCGCCCACCA +
Preference number: 4 (lower is better)
Translates to: SINTARRSTILHEKHGWDGRRPC*NPFRPP
Trigger: TGGTGGGCGGAACGGATTCCAGCATGGACGTCTTCC...ATCCCATCCGTGTTTTTCGTGTAAGATCGTGCTTCTCCGAGCAGTATTAATGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp GTCGCAAAATACTTTTTGGCAGTCCATCAGCAAAGAGGATCCTTTCCTTTGGAATCCCGAGCTCGTGGTTaGGGCAGCGTTTCACGACGT +
Preference number: 4 (lower is better)
Translates to: VAKYFLAVHQQRGSFPLESRARG*GSVSRR
Trigger: ACGTCGTGAAACGCTGCCCCAACCACGAGCTCGGGA...TTCCAAAGGAAAGGATCCTCTTTGCTGATGGACTGCCAAAAAGTATTTTGCGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp TCCATTAATACTGCTCGGAGAAGCACGATCTTACACGAAAAACACGGATGGGATTCAGCTTCCTCAGCCTaGCTCATGGGCGCTAGGTTG +
Preference number: 4 (lower is better)
Translates to: SINTARRSTILHEKHGWDSASSA*LMGARL
Trigger: CAACCTAGCGCCCATGAGCCAGGCTGAGGAAGCTGA...ATCCCATCCGTGTTTTTCGTGTAAGATCGTGCTTCTCCGAGCAGTATTAATGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp TGTTTCAGACACAGTCACTTGGCTGCTCACTACTATCCAGAACCAAAAGATGTCCAAGTCCCGCCCACCTaGCTTCTCACTCAGCTTCCT +
Preference number: 4 (lower is better)
Translates to: CFRHSHLAAHYYPEPKDVQVPPT*LLTQLP
Trigger: AGGAAGCTGAGTGAGAAGCCAGGTGGGCGGGACTTG...GACATCTTTTGGTTCTGGATAGTAGTGAGCAGCCAAGTGACTGTGTCTGAAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp GATCTTACACGAAAAACACGGATGGGATTTCGTTTTCACCTTAAAGCATTAAAGCCCACCCGGCCTTCCTaGGAACAAGTCCCGCCCACC +
Preference number: 4 (lower is better)
Translates to: DLTRKTRMGFRFHLKALKPTRPS*EQVPPT
Trigger: GGTGGGCGGGACTTGTTCCCAGGAAGGCCGGGTGGG...CTTTAATGCTTTAAGGTGAAAACGAAATCCCATCCGTGTTTTTCGTGTAAGATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp AAAGATGTCGCAAAATACTTTTTGGCAGTCCATCAGCAAAGAGGATCCTTTCCTAGCCTGCACTCTGGGTaGTGTCTCGGCTTGCGTGGG +
Preference number: 4 (lower is better)
Translates to: KDVAKYFLAVHQQRGSFPSLHSG*CLGLRG
Trigger: CCCACGCAAGCCGAGACACCACCCAGAGTGCAGGCT...AGGAAAGGATCCTCTTTGCTGATGGACTGCCAAAAAGTATTTTGCGACATCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp TGTTTCAGACACAGTCACTTGGCTGCTCACTACTATCCAGAACCAAAAGATGTCCACTACAGGGGCTCTTaGGACAGCCTCACTGGACTC +
Preference number: 4 (lower is better)
Translates to: CFRHSHLAAHYYPEPKDVHYRGS*DSLTGL
Trigger: GAGTCCAGTGAGGCTGTCCCAAGAGCCCCTGTAGTG...GACATCTTTTGGTTCTGGATAGTAGTGAGCAGCCAAGTGACTGTGTCTGAAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR TCA 90 bp GATCTTACACGAAAAACACGGATGGGATTTCGTTTTCACCTTAAAGCATTAAAGTGCCTTCCACGCGGATaGGGTGGCTGGCTGGAGCAG +
Preference number: 4 (lower is better)
Translates to: DLTRKTRMGFRFHLKALKCLPRG*GGWLEQ
Trigger: CTGCTCCAGCCAGCCACCTCATCCGCGTGGAAGGCA...CTTTAATGCTTTAAGGTGAAAACGAAATCCCATCCGTGTTTTTCGTGTAAGATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR TCA 90 bp TCCATTAATACTGCTCGGAGAAGCACGATCTTACACGAAAAACACGGATGGGATGAAGGTCCTGCCTCCTaGGGCAGTTTTGGACACACA +
Preference number: 4 (lower is better)
Translates to: SINTARRSTILHEKHGWDEGPAS*GSFGHT
Trigger: TGTGTGTCCAAAACTGCCTCAGGAGGCAGGACCTTC...ATCCCATCCGTGTTTTTCGTGTAAGATCGTGCTTCTCCGAGCAGTATTAATGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp GATCTTACACGAAAAACACGGATGGGATTTCGTTTTCACCTTAAAGCATTAAAGCTGGGGCCATCTGGCTaGTCCGTGTTCTGGCCGGCT +
Preference number: 4 (lower is better)
Translates to: DLTRKTRMGFRFHLKALKLGPSG*SVFWPA
Trigger: AGCCGGCCAGAACACGGAGCAGCCAGATGGCCCCAG...CTTTAATGCTTTAAGGTGAAAACGAAATCCCATCCGTGTTTTTCGTGTAAGATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp TGTTTCAGACACAGTCACTTGGCTGCTCACTACTATCCAGAACCAAAAGATGTCGAGCTCCTTCTGCCTTaGCTCTCTGAGCAGACTCAG +
Preference number: 4 (lower is better)
Translates to: CFRHSHLAAHYYPEPKDVELLLP*LSEQTQ
Trigger: CTGAGTCTGCTCAGAGAGGCAAGGCAGAAGGAGCTC...GACATCTTTTGGTTCTGGATAGTAGTGAGCAGCCAAGTGACTGTGTCTGAAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp GATCTTACACGAAAAACACGGATGGGATTTCGTTTTCACCTTAAAGCATTAAAGCAGGCGCCGGCGACATaGTGTCGAAGGTGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: DLTRKTRMGFRFHLKALKQAPAT*CRRWSW
Trigger: CCAGCTCCACCTTCGACACCATGTCGCCGGCGCCTG...CTTTAATGCTTTAAGGTGAAAACGAAATCCCATCCGTGTTTTTCGTGTAAGATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp GTCGCAAAATACTTTTTGGCAGTCCATCAGCAAAGAGGATCCTTTCCTTTGGAACCCCCAGGTCCTCAATaGTCAGGTTCTGCAGGTGGT +
Preference number: 4 (lower is better)
Translates to: VAKYFLAVHQQRGSFPLEPPGPQ*SGSAGG
Trigger: ACCACCTGCAGAACCTGACCATTGAGGACCTGGGGG...TTCCAAAGGAAAGGATCCTCTTTGCTGATGGACTGCCAAAAAGTATTTTGCGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000346387.8
ENST00000378288.8
ENST00000378295.9
CDS-3UTR CCA 90 bp TGTTTCAGACACAGTCACTTGGCTGCTCACTACTATCCAGAACCAAAAGATGTCAGGACCTCGCCTGGTTaGGAGATGACAGTCTCTAGG +
Preference number: 4 (lower is better)
Translates to: CFRHSHLAAHYYPEPKDVRTSPG*EMTVSR
Trigger: CCTAGAGACTGTCATCTCCCAACCAGGCGAGGTCCT...GACATCTTTTGGTTCTGGATAGTAGTGAGCAGCCAAGTGACTGTGTCTGAAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp AAAGATGTCGCAAAATACTTTTTGGCAGTCCATCAGCAAAGAGGATCCTTTCCTCAGAATACAGCGTGCTaGGGGCAGAGGCCAGTCCCA +
Preference number: 4 (lower is better)
Translates to: KDVAKYFLAVHQQRGSFPQNTAC*GQRPVP
Trigger: TGGGACTGGCCTCTGCCCCCAGCACGCTGTATTCTG...AGGAAAGGATCCTCTTTGCTGATGGACTGCCAAAAAGTATTTTGCGACATCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp AAAGATGTCGCAAAATACTTTTTGGCAGTCCATCAGCAAAGAGGATCCTTTCCTGGCTGCTCCGTGTTCTaGCCGGCTTCCTTGGACATC +
Preference number: 4 (lower is better)
Translates to: KDVAKYFLAVHQQRGSFPGCSVF*PASLDI
Trigger: GATGTCCAAGGAAGCCGGCCAGAACACGGAGCAGCC...AGGAAAGGATCCTCTTTGCTGATGGACTGCCAAAAAGTATTTTGCGACATCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp CCTCACTGGACTCAGGGTGGACAGGTAACGTACCTAAGAAACAAATCAACAAGCGTTCTGAGTGACAAGTaGCTCTGTGCCAGGATACTG +
Preference number: 4 (lower is better)
Translates to: PHWTQGGQVTYLRNKSTSVLSDK*LCARIL
Trigger: CAGTATCCTGGCACAGAGCCACTTGTCACTCAGAAC...GCTTGTTGATTTGTTTCTTAGGTACGTTACCTGTCCACCCTGAGTCCAGTGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp GGAAGGACCTCGCCTGGTTGGGAGATGACAGTCTCTAGGATGAAGCCTGGAAGTCACGAAAAACACGGATaGGATTTCGTTTTCACCTTA +
Preference number: 4 (lower is better)
Translates to: GRTSPGWEMTVSRMKPGSHEKHG*DFVFTL
Trigger: TAAGGTGAAAACGAAATCCCATCCGTGTTTTTCGTG...ACTTCCAGGCTTCATCCTAGAGACTGTCATCTCCCAACCAGGCGAGGTCCTTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR TCA 90 bp GTCGCAAAATACTTTTTGGCAGTCCATCAGCAAAGAGGATCCTTTCCTTTGGAAGAAGGTCCTGCCTCCTaGGGCAGTTTTGGACACACA +
Preference number: 4 (lower is better)
Translates to: VAKYFLAVHQQRGSFPLEEGPAS*GSFGHT
Trigger: TGTGTGTCCAAAACTGCCTCAGGAGGCAGGACCTTC...TTCCAAAGGAAAGGATCCTCTTTGCTGATGGACTGCCAAAAAGTATTTTGCGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp TCCATTAATACTGCTCGGAGAAGCACGATCTTACACGAAAAACACGGATGGGATTTGGCCGTGCTGGACTaGTGGAAAGTGACCTCAAAG +
Preference number: 4 (lower is better)
Translates to: SINTARRSTILHEKHGWDLAVLD*WKVTSK
Trigger: CTTTGAGGTCACTTTCCAGCAGTCCAGCACGGCCAA...ATCCCATCCGTGTTTTTCGTGTAAGATCGTGCTTCTCCGAGCAGTATTAATGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp CCTCACTGGACTCAGGGTGGACAGGTAACGTACCTAAGAAACAAATCAACAAGCACACAGTCACTTGGCTaGTCACTACTATCCAGAACC +
Preference number: 4 (lower is better)
Translates to: PHWTQGGQVTYLRNKSTSTQSLG*SLLSRT
Trigger: GGTTCTGGATAGTAGTGAGCAGCCAAGTGACTGTGT...GCTTGTTGATTTGTTTCTTAGGTACGTTACCTGTCCACCCTGAGTCCAGTGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp TCCATTAATACTGCTCGGAGAAGCACGATCTTACACGAAAAACACGGATGGGATTGTCTAACCTTGCTGTaGCCTGAGGGGCTTAACTGC +
Preference number: 4 (lower is better)
Translates to: SINTARRSTILHEKHGWDCLTLL*PEGLNC
Trigger: GCAGTTAAGCCCCTCAGGGCACAGCAAGGTTAGACA...ATCCCATCCGTGTTTTTCGTGTAAGATCGTGCTTCTCCGAGCAGTATTAATGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp AAAGATGTCGCAAAATACTTTTTGGCAGTCCATCAGCAAAGAGGATCCTTTCCTGAACTGAAGCACATCTaGGCTGGGCTGAGGAACCCC +
Preference number: 4 (lower is better)
Translates to: KDVAKYFLAVHQQRGSFPELKHI*AGLRNP
Trigger: GGGGTTCCTCAGCCCAGCGCAGATGTGCTTCAGTTC...AGGAAAGGATCCTCTTTGCTGATGGACTGCCAAAAAGTATTTTGCGACATCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp GATCTTACACGAAAAACACGGATGGGATTTCGTTTTCACCTTAAAGCATTAAAGCAGGTTGGGTGTAGCTaGCGAACTGTGCGGGGGAGG +
Preference number: 4 (lower is better)
Translates to: DLTRKTRMGFRFHLKALKQVGCS*RTVRGR
Trigger: CCTCCCCCGCACAGTTCGGCAGCTACACCCAACCTG...CTTTAATGCTTTAAGGTGAAAACGAAATCCCATCCGTGTTTTTCGTGTAAGATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000378288.8
ENST00000378295.9
CDS-3UTR CCA 90 bp AAAGATGTCGCAAAATACTTTTTGGCAGTCCATCAGCAAAGAGGATCCTTTCCTCAAGTCCCGCCCACCTaGCTTCTCACTCAGCTTCCT +
Preference number: 4 (lower is better)
Translates to: KDVAKYFLAVHQQRGSFPQVPPT*LLTQLP
Trigger: AGGAAGCTGAGTGAGAAGCCAGGTGGGCGGGACTTG...AGGAAAGGATCCTCTTTGCTGATGGACTGCCAAAAAGTATTTTGCGACATCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp AAAGATGTCGCAAAATACTTTTTGGCAGTCCATCAGCAAAGAGGATCCTTTCCTGGAACGCTGGGGGAATaGGGGAGAGTCGCTGTTTCT +
Preference number: 4 (lower is better)
Translates to: KDVAKYFLAVHQQRGSFPGTLGE*GRVAVS
Trigger: AGAAACAGCGACTCTCCCCCATTCCCCCAGCGTTCC...AGGAAAGGATCCTCTTTGCTGATGGACTGCCAAAAAGTATTTTGCGACATCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp GATCTTACACGAAAAACACGGATGGGATTTCGTTTTCACCTTAAAGCATTAAAGCGTGCACCTTGTTCATaGGCGAGAGGACCGGCCCGT +
Preference number: 4 (lower is better)
Translates to: DLTRKTRMGFRFHLKALKRAPCS*ARGPAR
Trigger: ACGGGCCGGTCCTCTCGCCCATGAACAAGGTGCACG...CTTTAATGCTTTAAGGTGAAAACGAAATCCCATCCGTGTTTTTCGTGTAAGATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378288.8
ENST00000378295.9
CDS-3UTR TCA 90 bp GATCTTACACGAAAAACACGGATGGGATTTCGTTTTCACCTTAAAGCATTAAAGCGCTCTGCCTGCCGGTaGCAGGGTCATCCACATACT +
Preference number: 4 (lower is better)
Translates to: DLTRKTRMGFRFHLKALKRSACR*QGHPHT
Trigger: AGTATGTGGATGACCCTGTCACCGGCAGGCAGAGCG...CTTTAATGCTTTAAGGTGAAAACGAAATCCCATCCGTGTTTTTCGTGTAAGATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR TCA 90 bp AAAGATGTCGCAAAATACTTTTTGGCAGTCCATCAGCAAAGAGGATCCTTTCCTTGTACAGGATGGTGGTaGATTCCGTCCCCACCTGTG +
Preference number: 4 (lower is better)
Translates to: KDVAKYFLAVHQQRGSFPCTGWW*IPSPPV
Trigger: CACAGGTGGGGACGGAATTCACCACCATCCTGTACA...AGGAAAGGATCCTCTTTGCTGATGGACTGCCAAAAAGTATTTTGCGACATCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR TCA 90 bp GTCGCAAAATACTTTTTGGCAGTCCATCAGCAAAGAGGATCCTTTCCTTTGGAAACTGACTGTTCTGAGTaGCAAGTGGCTCTGTGCCAG +
Preference number: 4 (lower is better)
Translates to: VAKYFLAVHQQRGSFPLETDCSE*QVALCQ
Trigger: CTGGCACAGAGCCACTTGTCACTCAGAACAGTCAGT...TTCCAAAGGAAAGGATCCTCTTTGCTGATGGACTGCCAAAAAGTATTTTGCGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp GTCGCAAAATACTTTTTGGCAGTCCATCAGCAAAGAGGATCCTTTCCTTTGGAAGAAGGTCGAAGTAGGTaGTGTCTGGTTCCAGAGAGC +
Preference number: 4 (lower is better)
Translates to: VAKYFLAVHQQRGSFPLEEGRSR*CLVPES
Trigger: GCTCTCTGGAACCAGACAGCACCTACTTCGACCTTC...TTCCAAAGGAAAGGATCCTCTTTGCTGATGGACTGCCAAAAAGTATTTTGCGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp AAAGATGTCGCAAAATACTTTTTGGCAGTCCATCAGCAAAGAGGATCCTTTCCTGATGAGGTGGCTGGCTaGAGCAGACTGTCCTTCGTT +
Preference number: 4 (lower is better)
Translates to: KDVAKYFLAVHQQRGSFPDEVAG*SRLSFV
Trigger: AACGAAGGACAGTCTGCTCCAGCCAGCCACCTCATC...AGGAAAGGATCCTCTTTGCTGATGGACTGCCAAAAAGTATTTTGCGACATCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp GATCTTACACGAAAAACACGGATGGGATTTCGTTTTCACCTTAAAGCATTAAAGTTCCGTCCCCACCTGTaGTGGCTCATAGGGCACCAC +
Preference number: 4 (lower is better)
Translates to: DLTRKTRMGFRFHLKALKFRPHL*WLIGHH
Trigger: GTGGTGCCCTATGAGCCACCACAGGTGGGGACGGAA...CTTTAATGCTTTAAGGTGAAAACGAAATCCCATCCGTGTTTTTCGTGTAAGATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp TCCATTAATACTGCTCGGAGAAGCACGATCTTACACGAAAAACACGGATGGGATTCACTGGACTCAGGGTaGACAGGTAACGTACCTAAG +
Preference number: 4 (lower is better)
Translates to: SINTARRSTILHEKHGWDSLDSG*TGNVPK
Trigger: CTTAGGTACGTTACCTGTCCACCCTGAGTCCAGTGA...ATCCCATCCGTGTTTTTCGTGTAAGATCGTGCTTCTCCGAGCAGTATTAATGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp TGTTTCAGACACAGTCACTTGGCTGCTCACTACTATCCAGAACCAAAAGATGTCATGGCAGAGCATTCCTaGAGATTTGCCTGGATTTGC +
Preference number: 4 (lower is better)
Translates to: CFRHSHLAAHYYPEPKDVMAEHS*RFAWIC
Trigger: GCAAATCCAGGCAAATCTGCAGGAATGCTCTGCCAT...GACATCTTTTGGTTCTGGATAGTAGTGAGCAGCCAAGTGACTGTGTCTGAAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp TGTTTCAGACACAGTCACTTGGCTGCTCACTACTATCCAGAACCAAAAGATGTCAGGAGTGGATGTTTGTaGGTTGGAGACACTGACTGT +
Preference number: 4 (lower is better)
Translates to: CFRHSHLAAHYYPEPKDVRSGCL*VGDTDC
Trigger: ACAGTCAGTGTCTCCAACGCACAAACATCCACTCCT...GACATCTTTTGGTTCTGGATAGTAGTGAGCAGCCAAGTGACTGTGTCTGAAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp GATCTTACACGAAAAACACGGATGGGATTTCGTTTTCACCTTAAAGCATTAAAGGGAAGACGTCCATGCTaGAATCCGTTCCGCCCACCA +
Preference number: 4 (lower is better)
Translates to: DLTRKTRMGFRFHLKALKGRRPC*NPFRPP
Trigger: TGGTGGGCGGAACGGATTCCAGCATGGACGTCTTCC...CTTTAATGCTTTAAGGTGAAAACGAAATCCCATCCGTGTTTTTCGTGTAAGATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp TGTTTCAGACACAGTCACTTGGCTGCTCACTACTATCCAGAACCAAAAGATGTCCTCAGCAGATTGAACTaGGCCATGACAGATGTAGTC +
Preference number: 4 (lower is better)
Translates to: CFRHSHLAAHYYPEPKDVLSRLN*AMTDVV
Trigger: GACTACATCTGTCATGGCCCAGTTCAATCTGCTGAG...GACATCTTTTGGTTCTGGATAGTAGTGAGCAGCCAAGTGACTGTGTCTGAAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp TTGCATTTTCTCCTGACCACGGCGAAGTCTCAACTCTGTCTACTTTCACAGCTGTCCCTGAAAATACACTaGTGTTTCAGACACAGTCAC +
Preference number: 4 (lower is better)
Translates to: LHFLLTTAKSQLCLLSQLSLKIH*CFRHSH
Trigger: GTGACTGTGTCTGAAACACCAGTGTATTTTCAGGGA...CAGCTGTGAAAGTAGACAGAGTTGAGACTTCGCCGTGGTCAGGAGAAAATGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp TTGCATTTTCTCCTGACCACGGCGAAGTCTCAACTCTGTCTACTTTCACAGCTGAAAATGGCAATAAGATaGAGAGCTGAGGTGACATGC +
Preference number: 4 (lower is better)
Translates to: LHFLLTTAKSQLCLLSQLKMAIR*RAEVTC
Trigger: GCATGTCACCTCAGCTCTCCATCTTATTGCCATTTT...CAGCTGTGAAAGTAGACAGAGTTGAGACTTCGCCGTGGTCAGGAGAAAATGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp GTCGCAAAATACTTTTTGGCAGTCCATCAGCAAAGAGGATCCTTTCCTTTGGAAACACAGTCACTTGGCTaGTCACTACTATCCAGAACC +
Preference number: 4 (lower is better)
Translates to: VAKYFLAVHQQRGSFPLETQSLG*SLLSRT
Trigger: GGTTCTGGATAGTAGTGAGCAGCCAAGTGACTGTGT...TTCCAAAGGAAAGGATCCTCTTTGCTGATGGACTGCCAAAAAGTATTTTGCGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp GTCGCAAAATACTTTTTGGCAGTCCATCAGCAAAGAGGATCCTTTCCTTTGGAAAGGAGTGGATGTTTGTaGGTTGGAGACACTGACTGT +
Preference number: 4 (lower is better)
Translates to: VAKYFLAVHQQRGSFPLERSGCL*VGDTDC
Trigger: ACAGTCAGTGTCTCCAACGCACAAACATCCACTCCT...TTCCAAAGGAAAGGATCCTCTTTGCTGATGGACTGCCAAAAAGTATTTTGCGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp TGTTTCAGACACAGTCACTTGGCTGCTCACTACTATCCAGAACCAAAAGATGTCATGCTCTGTAACCCTTaGGAGGTGAAATACTCGATG +
Preference number: 4 (lower is better)
Translates to: CFRHSHLAAHYYPEPKDVMLCNP*EVKYSM
Trigger: CATCGAGTATTTCACCTCCCAAGGGTTACAGAGCAT...GACATCTTTTGGTTCTGGATAGTAGTGAGCAGCCAAGTGACTGTGTCTGAAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346387.8
ENST00000378288.8
ENST00000378295.9
CDS-3UTR CCA 90 bp TTGCATTTTCTCCTGACCACGGCGAAGTCTCAACTCTGTCTACTTTCACAGCTGTCGCAAAATACTTTTTaGCAGTCCATCAGCAAAGAG +
Preference number: 4 (lower is better)
Translates to: LHFLLTTAKSQLCLLSQLSQNTF*QSISKE
Trigger: CTCTTTGCTGATGGACTGCCAAAAAGTATTTTGCGA...CAGCTGTGAAAGTAGACAGAGTTGAGACTTCGCCGTGGTCAGGAGAAAATGCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp GATCTTACACGAAAAACACGGATGGGATTTCGTTTTCACCTTAAAGCATTAAAGGTCCTGATCTGGGGATaGGGGCTGTGTCTAACCTTG +
Preference number: 4 (lower is better)
Translates to: DLTRKTRMGFRFHLKALKVLIWG*GLCLTL
Trigger: CAAGGTTAGACACAGCCCCCATCCCCAGATCAGGAC...CTTTAATGCTTTAAGGTGAAAACGAAATCCCATCCGTGTTTTTCGTGTAAGATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp CCTCACTGGACTCAGGGTGGACAGGTAACGTACCTAAGAAACAAATCAACAAGCCACGAAAAACACGGATaGGATTTCGTTTTCACCTTA +
Preference number: 4 (lower is better)
Translates to: PHWTQGGQVTYLRNKSTSHEKHG*DFVFTL
Trigger: TAAGGTGAAAACGAAATCCCATCCGTGTTTTTCGTG...GCTTGTTGATTTGTTTCTTAGGTACGTTACCTGTCCACCCTGAGTCCAGTGAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp AAAGATGTCGCAAAATACTTTTTGGCAGTCCATCAGCAAAGAGGATCCTTTCCTATGGCAGAGCATTCCTaGAGATTTGCCTGGATTTGC +
Preference number: 4 (lower is better)
Translates to: KDVAKYFLAVHQQRGSFPMAEHS*RFAWIC
Trigger: GCAAATCCAGGCAAATCTGCAGGAATGCTCTGCCAT...AGGAAAGGATCCTCTTTGCTGATGGACTGCCAAAAAGTATTTTGCGACATCTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp GTCGCAAAATACTTTTTGGCAGTCCATCAGCAAAGAGGATCCTTTCCTTTGGAAATGCTCTGTAACCCTTaGGAGGTGAAATACTCGATG +
Preference number: 4 (lower is better)
Translates to: VAKYFLAVHQQRGSFPLEMLCNP*EVKYSM
Trigger: CATCGAGTATTTCACCTCCCAAGGGTTACAGAGCAT...TTCCAAAGGAAAGGATCCTCTTTGCTGATGGACTGCCAAAAAGTATTTTGCGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000346387.8
ENST00000378288.8
ENST00000378295.9
CDS-3UTR CCA 90 bp TGTTTCAGACACAGTCACTTGGCTGCTCACTACTATCCAGAACCAAAAGATGTCTCCCTGAAAATACACTaGTGTTTCAGACACAGTCAC +
Preference number: 4 (lower is better)
Translates to: CFRHSHLAAHYYPEPKDVSLKIH*CFRHSH
Trigger: GTGACTGTGTCTGAAACACCAGTGTATTTTCAGGGA...GACATCTTTTGGTTCTGGATAGTAGTGAGCAGCCAAGTGACTGTGTCTGAAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR GCA 90 bp GATCTTACACGAAAAACACGGATGGGATTTCGTTTTCACCTTAAAGCATTAAAGATGGCAGAGCATTCCTaGAGATTTGCCTGGATTTGC +
Preference number: 4 (lower is better)
Translates to: DLTRKTRMGFRFHLKALKMAEHS*RFAWIC
Trigger: GCAAATCCAGGCAAATCTGCAGGAATGCTCTGCCAT...CTTTAATGCTTTAAGGTGAAAACGAAATCCCATCCGTGTTTTTCGTGTAAGATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CCA 90 bp GATCTTACACGAAAAACACGGATGGGATTTCGTTTTCACCTTAAAGCATTAAAGATGCGGGCCGTTTGTTaGCATTTTCGCTTTTCCCAT +
Preference number: 4 (lower is better)
Translates to: DLTRKTRMGFRFHLKALKMRAVC*HFRFSH
Trigger: ATGGGAAAAGCGAAAATGCCAACAAACGGCCCGCAT...CTTTAATGCTTTAAGGTGAAAACGAAATCCCATCCGTGTTTTTCGTGTAAGATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000378288.8
CDS-3UTR CAA 90 bp TCAGGGCCGCCGCCTGGGCCGCCGCGGTTGGGGATGGTGATGGTGTGGCGCACGCCTGGGCCGCCGCGGTaGGGGATGGTGATGGTGTGG +
Preference number: 5 (lower is better)
Translates to: SGPPPGPPRLGMVMVWRTPGPPR*GMVMVW
Trigger: CCACACCATCACCATCCCCAACCGCGGCGGCCCAGG...CGTGCGCCACACCATCACCATCCCCAACCGCGGCGGCCCAGGCGGCGGCCCTGA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR CAA 90 bp TCGGGCAGGTCGAAGCCGAAGTCCGCCCACTCGTCAGGGCCGCCGCCTGGGCCGCCTGGGCCGCCGCGGTaGGGGATGGTGATGGTGTGG +
Preference number: 5 (lower is better)
Translates to: SGRSKPKSAHSSGPPPGPPGPPR*GMVMVW
Trigger: CCACACCATCACCATCCCCAACCGCGGCGGCCCAGG...CGGCCCAGGCGGCGGCCCTGACGAGTGGGCGGACTTCGGCTTCGACCTGCCCGA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS CCA 90 bp GGGTTGTGCGTAGGGCGAGTGGGTGGGCACGCTGGCGGCGTGCTCTaGGGTGTAGGGGCTGGCCGAGGCCGCGCGGCTGCTCATCTGGTC +
Preference number: 5 (lower is better)
Translates to: GLCVGRVGGHAGGVL*GVGAGRGRAAAHLV
Trigger: GACCAGATGAGCAGCCGCGCGGCCTCGGCCAGCCCCTACACCCCAGAGCACGCCGCCAGCGTGCCCACCCACTCGCCCTACGCACAACCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000346387.8
ENST00000354437.8
ENST00000357733.7
ENST00000378280.5
ENST00000378285.5
ENST00000378288.8
ENST00000378290.4
ENST00000378295.9
ENST00000603362.5
ENST00000603364.5
ENST00000604074.5
ENST00000604194.1
ENST00000604479.5
CDS CCA 90 bp GACGAGGCATGGATCTGGGCGGCCCGAGGGGAAGGGTCACGGTCGTaGCCGCCCGGCAGCGTGGACCGAGCGGGAGAGGCTCCGCAGCTA +
Preference number: 5 (lower is better)
Translates to: DEAWIWAARGEGSRS*PPGSVDRAGEAPQL
Trigger: TAGCTGCGGAGCCTCTCCCGCTCGGTCCACGCTGCCGGGCGGCCACGACCGTGACCCTTCCCCTCGGGCCGCCCAGATCCATGCCTCGTC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378280.5
ENST00000378285.5
ENST00000378288.8
ENST00000603364.5
CDS-3UTR CAA 90 bp TCAGGGCCGCCGCCTGGGCCGCCGCGGTTGGGGATGGTGATGGTGTGGCGCACGGGCTGCTTGCGGGCCTaGCAGTCGGGCAGGTCGAAG +
Preference number: 5 (lower is better)
Translates to: SGPPPGPPRLGMVMVWRTGCLRA*QSGRSK
Trigger: CTTCGACCTGCCCGACTGCAAGGCCCGCAAGCAGCC...CGTGCGCCACACCATCACCATCCCCAACCGCGGCGGCCCAGGCGGCGGCCCTGA
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR CAA 90 bp TCGGGCAGGTCGAAGCCGAAGTCCGCCCACTCGTCAGGGCCGCCGCCTGGGCCGCCCACGGGCCCCAGGTaGGGTGTAGCTGCCGAACTG +
Preference number: 5 (lower is better)
Translates to: SGRSKPKSAHSSGPPPGPPTGPR*GVAAEL
Trigger: CAGTTCGGCAGCTACACCCAACCTGGGGCCCGTGGG...CGGCCCAGGCGGCGGCCCTGACGAGTGGGCGGACTTCGGCTTCGACCTGCCCGA
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354437.8
ENST00000378285.5
CDS CCA 90 bp GCGAGTGGGTGGGCACGCTGGCGGCGTGCTCTGGGGTGTAGGGGCTaGCCGAGGCCGCGCGGCTGCTCATCTGGTCCATGGTGCTGCTCA +
Preference number: 5 (lower is better)
Translates to: ASGWARWRRALGCRG*PRPRGCSSGPWCCS
Trigger: TGAGCAGCACCATGGACCAGATGAGCAGCCGCGCGGCCTCGGCCAGCCCCTACACCCCAGAGCACGCCGCCAGCGTGCCCACCCACTCGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000346387.8
ENST00000354437.8
ENST00000357733.7
ENST00000378280.5
ENST00000378285.5
ENST00000378288.8
ENST00000378290.4
ENST00000378295.9
ENST00000603362.5
ENST00000603364.5
ENST00000604074.5
ENST00000604194.1
ENST00000604479.5
CDS CCA 90 bp TGCACACGCCAGGGAACTGGTGTCCCGTGGGACGAGGCATGGATCTaGGCGGCCCGAGGGGAAGGGTCACGGTCGTGGCCGCCCGGCAGC +
Preference number: 5 (lower is better)
Translates to: CTRQGTGVPWDEAWI*AARGEGSRSWPPGS
Trigger: GCTGCCGGGCGGCCACGACCGTGACCCTTCCCCTCGGGCCGCCCAGATCCATGCCTCGTCCCACGGGACACCAGTTCCCTGGCGTGTGCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378280.5
ENST00000378285.5
ENST00000378288.8
ENST00000603364.5
CDS CCA 90 bp GGGGTCTGCACACGCCAGGGAACTGGTGTCCCGTGGGACGAGGCATaGATCTGGGCGGCCCGAGGGGAAGGGTCACGGTCGTGGCCGCCC +
Preference number: 5 (lower is better)
Translates to: GVCTRQGTGVPWDEA*IWAARGEGSRSWPP
Trigger: GGGCGGCCACGACCGTGACCCTTCCCCTCGGGCCGCCCAGATCCATGCCTCGTCCCACGGGACACCAGTTCCCTGGCGTGTGCAGACCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000378280.5
ENST00000378285.5
ENST00000378288.8
ENST00000603364.5
CDS-3UTR CAA 90 bp TGGGCGGTGGCGCAGGCTGCAGCCAGGCGAGGCCCTCAGTGGATCTCGGCCTCCCTGGCGGCCCCGTTCTaGGCGGAGCTCTCGTTCAGG +
Preference number: 5 (lower is better)
Translates to: WAVAQAAARRGPQWISASLAAPF*AELSFR
Trigger: CCTGAACGAGAGCTCCGCCAAGAACGGGGCCGCCAG...GGAGGCCGAGATCCACTGAGGGCCTCGCCTGGCTGCAGCCTGCGCCACCGCCCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR CAA 90 bp GTGGCGCACGCGGAAGTGCACGGCCTCCATGACCCGCTGGCGCTGCAGTTCCCCGGGATGGGCCGGACCTaGCCTTTCCCCGGGCACAGC +
Preference number: 5 (lower is better)
Translates to: VAHAEVHGLHDPLALQFPGMGRT*PFPGHS
Trigger: GCTGTGCCCGGGGAAAGGCAAGGTCCGGCCCATCCC...GGGGAACTGCAGCGCCAGCGGGTCATGGAGGCCGTGCACTTCCGCGTGCGCCAC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR CAA 90 bp ACGCGGAAGTGCACGGCCTCCATGACCCGCTGGCGCTGCAGTTCCCCTGAGCCGCCTGGGCCGCCGCGGTaGGGGATGGTGATGGTGTGG +
Preference number: 5 (lower is better)
Translates to: TRKCTASMTRWRCSSPEPPGPPR*GMVMVW
Trigger: CCACACCATCACCATCCCCAACCGCGGCGGCCCAGG...CGGCTCAGGGGAACTGCAGCGCCAGCGGGTCATGGAGGCCGTGCACTTCCGCGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR CAA 90 bp CTGGAAGTCGGAGCCGACGCTGCGGTCCCCACCCACGCCTGCCATGGAGCACGCGGCTGCTTGCGGGCCTaGCAGTCGGGCAGGTCGAAG +
Preference number: 5 (lower is better)
Translates to: LEVGADAAVPTHACHGARGCLRA*QSGRSK
Trigger: CTTCGACCTGCCCGACTGCAAGGCCCGCAAGCAGCC...GCGTGCTCCATGGCAGGCGTGGGTGGGGACCGCAGCGTCGGCTCCGACTTCCAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CAA 90 bp CCGCCGCCTGGGCCGCCGCGGTTGGGGATGGTGATGGTGTGGCGCACGCGGAAGTCCGTGAACTCCTCCTaGATGGGCTGCTTGCGGGCC +
Preference number: 5 (lower is better)
Translates to: PPPGPPRLGMVMVWRTRKSVNSS*MGCLRA
Trigger: GGCCCGCAAGCAGCCCATCAAGGAGGAGTTCACGGA...CTTCCGCGTGCGCCACACCATCACCATCCCCAACCGCGGCGGCCCAGGCGGCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR CAA 90 bp GCCGCCGATGGAGATGGTGGCCGCGTTGCTAGAGCGGAGCAGCTGCTGCGCGGTGGGATGGGCCGGACCTaGCCTTTCCCCGGGCACAGC +
Preference number: 5 (lower is better)
Translates to: AADGDGGRVARAEQLLRGGMGRT*PFPGHS
Trigger: GCTGTGCCCGGGGAAAGGCAAGGTCCGGCCCATCCC...ACCGCGCAGCAGCTGCTCCGCTCTAGCAACGCGGCCACCATCTCCATCGGCGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR CAA 90 bp GTGGCGCACGCGGAAGTGCACGGCCTCCATGACCCGCTGGCGCTGCAGTTCCCCCCCACGGGCCCCAGGTaGGGTGTAGCTGCCGAACTG +
Preference number: 5 (lower is better)
Translates to: VAHAEVHGLHDPLALQFPPTGPR*GVAAEL
Trigger: CAGTTCGGCAGCTACACCCAACCTGGGGCCCGTGGG...GGGGAACTGCAGCGCCAGCGGGTCATGGAGGCCGTGCACTTCCGCGTGCGCCAC
71% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000354437.8
ENST00000378285.5
CDS-3UTR CAA 90 bp GTGGCGCACGCGGAAGTGCACGGCCTCCATGACCCGCTGGCGCTGCAGTTCCCCGCGTGGCCATGGTTGTaGAGCATCCCGGGGCCCACG +
Preference number: 5 (lower is better)
Translates to: VAHAEVHGLHDPLALQFPAWPWL*SIPGPT
Trigger: CGTGGGCCCCGGGATGCTCAACAACCATGGCCACGC...GGGGAACTGCAGCGCCAGCGGGTCATGGAGGCCGTGCACTTCCGCGTGCGCCAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354437.8
ENST00000378285.5
CDS-3UTR CAA 90 bp CCTTGCAGTCGGGCAGGTCGAAGCCGAAGTCCGCCCACTCGTCAGGGCCGCCGCGCGTGGCCATGGTTGTaGAGCATCCCGGGGCGGCCT +
Preference number: 5 (lower is better)
Translates to: PCSRAGRSRSPPTRQGRRAWPWL*SIPGRP
Trigger: AGGCCGCCCCGGGATGCTCAACAACCATGGCCACGC...GCGGCGGCCCTGACGAGTGGGCGGACTTCGGCTTCGACCTGCCCGACTGCAAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378280.5
CDS GCA 90 bp GGACTGGGCGCTGTGGCTGCTGCTCATCTCGCCGTTGGCTGGCACTaGGTGGCCATGGTTGTTGAGCATCCCGGGGCCCACGGGCCCCAG +
Preference number: 5 (lower is better)
Translates to: GLGAVAAAHLAVGWH*VAMVVEHPGAHGPQ
Trigger: CTGGGGCCCGTGGGCCCCGGGATGCTCAACAACCATGGCCACGCAGTGCCAGCCAACGGCGAGATGAGCAGCAGCCACAGCGCCCAGTCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354437.8
ENST00000378285.5
ENST00000378288.8
ENST00000378290.4
ENST00000378295.9
CDS GCA 90 bp ACTGGCTCTGGCCACTCACGTCTAGAGGGGTGGGCACACCCAGACTaGCCGGCCCTGAGACCCGCCTCCTGCCCGATGCTCCTCCTGGCC +
Preference number: 5 (lower is better)
Translates to: TGSGHSRLEGWAHPD*PALRPASCPMLLLA
Trigger: GGCCAGGAGGAGCATCGGGCAGGAGGCGGGTCTCAGGGCCGGGCAGTCTGGGTGTGCCCACCCCTCTAGACGTGAGTGGCCAGAGCCAGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000604194.1
CDS CCA 90 bp CTGAGACCCGCCTCCTGCCCGATGCTCCTCCTGGCCCGGGCCAGGTaGGAACCCCGAGCAGACAGTGGGGCGAGCTCAGACCTCTTGAGG +
Preference number: 5 (lower is better)
Translates to: LRPASCPMLLLARAR*EPRADSGASSDLLR
Trigger: CCTCAAGAGGTCTGAGCTCGCCCCACTGTCTGCTCGGGGTTCCCACCTGGCCCGGGCCAGGAGGAGCATCGGGCAGGAGGCGGGTCTCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000604194.1
CDS-3UTR CAA 90 bp CCTTGCAGTCGGGCAGGTCGAAGCCGAAGTCCGCCCACTCGTCAGGGCCGCCGCCTCCCGAGCTCGTGGTaGGGGCAGCGTTTCACGACG +
Preference number: 5 (lower is better)
Translates to: PCSRAGRSRSPPTRQGRRLPSSW*GQRFTT
Trigger: CGTCGTGAAACGCTGCCCCAACCACGAGCTCGGGAG...GCGGCGGCCCTGACGAGTGGGCGGACTTCGGCTTCGACCTGCCCGACTGCAAGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR CAA 90 bp CTTGGGTCTCTGGGCGGTGGCGCAGGCTGCAGCCAGGCGAGGCCCTCAGTGGATCTGGCGGCCCCGTTCTaGGCGGAGCTCTCGTTCAGG +
Preference number: 5 (lower is better)
Translates to: LGSLGGGAGCSQARPSVDLAAPF*AELSFR
Trigger: CCTGAACGAGAGCTCCGCCAAGAACGGGGCCGCCAG...ATCCACTGAGGGCCTCGCCTGGCTGCAGCCTGCGCCACCGCCCAGAGACCCAAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR CAA 90 bp GGGATGGGCCGGACCTTGCCTTTCCCCGGGCACAGCCCGAAGGTCCTGCCTCCTGGCTGCTTGCGGGCCTaGCAGTCGGGCAGGTCGAAG +
Preference number: 5 (lower is better)
Translates to: GMGRTLPFPGHSPKVLPPGCLRA*QSGRSK
Trigger: CTTCGACCTGCCCGACTGCAAGGCCCGCAAGCAGCC...AGGAGGCAGGACCTTCGGGCTGTGCCCGGGGAAAGGCAAGGTCCGGCCCATCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000346387.8
ENST00000354437.8
ENST00000357733.7
ENST00000378280.5
ENST00000378285.5
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CAA 90 bp GCAGAGAGAGTCCCCAGCCCCCGGCGCGGGCAAGACGCAGTTAGGGACATTCCCGGGATGGGCCGGACCTaGCCTTTCCCCGGGCACAGC +
Preference number: 5 (lower is better)
Translates to: AERVPSPRRGQDAVRDIPGMGRT*PFPGHS
Trigger: GCTGTGCCCGGGGAAAGGCAAGGTCCGGCCCATCCC...GGGAATGTCCCTAACTGCGTCTTGCCCGCGCCGGGGGCTGGGGACTCTCTCTGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CAA 90 bp CTGCTTGCGGGCCTTGCAGTCGGGCAGGTCGAAGCCGAAGTCCGCCCACTCGTCGGGATGGGCCGGACCTaGCCTTTCCCCGGGCACAGC +
Preference number: 5 (lower is better)
Translates to: LLAGLAVGQVEAEVRPLVGMGRT*PFPGHS
Trigger: GCTGTGCCCGGGGAAAGGCAAGGTCCGGCCCATCCC...GACGAGTGGGCGGACTTCGGCTTCGACCTGCCCGACTGCAAGGCCCGCAAGCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR CAA 90 bp GGCGGTGGCGCAGGCTGCAGCCAGGCGAGGCCCTCAGTGGATCTCGGCCTCCGTATGCCCCCGTGCACCTaGTTCATGGGCGAGAGGACC +
Preference number: 5 (lower is better)
Translates to: GGGAGCSQARPSVDLGLRMPPCT*FMGERT
Trigger: GGTCCTCTCGCCCATGAACAAGGTGCACGGGGGCAT...ACGGAGGCCGAGATCCACTGAGGGCCTCGCCTGGCTGCAGCCTGCGCCACCGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354437.8
ENST00000378285.5
CDS-3UTR CAA 90 bp TGCGCTGGGCTGAGGAACCCCGGGTGTCAGGATGGGCCCCCGCGGCTCCTGAAGCTGCTCATCTCGCCGTaGGCTGGCACTGCGTGGCCA +
Preference number: 5 (lower is better)
Translates to: CAGLRNPGCQDGPPRLLKLLISP*AGTAWP
Trigger: TGGCCACGCAGTGCCAGCCAACGGCGAGATGAGCAG...CTTCAGGAGCCGCGGGGGCCCATCCTGACACCCGGGGTTCCTCAGCCCAGCGCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
CDS CCA 90 bp TGGGCGCTGTGGCTGCTGCTCATCTCGCCGTTGGCTGGCACTGCGTaGCCATGGTTGTTGAGCATCCCGGGGCCCACGGGCCCCAGGTTG +
Preference number: 5 (lower is better)
Translates to: WALWLLLISPLAGTA*PWLLSIPGPTGPRL
Trigger: CAACCTGGGGCCCGTGGGCCCCGGGATGCTCAACAACCATGGCCACGCAGTGCCAGCCAACGGCGAGATGAGCAGCAGCCACAGCGCCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354437.8
ENST00000378285.5
ENST00000378288.8
ENST00000378290.4
ENST00000378295.9
CDS CCA 90 bp GGTGGCGGAGTGCAGTGGGACCCCGAGACCATGGACTGGGCGCTGTaGCTGCTGCTCATCTCGCCGTTGGCTGGCACTGCGTGGCCATGG +
Preference number: 5 (lower is better)
Translates to: GGGVQWDPETMDWAL*LLLISPLAGTAWPW
Trigger: CCATGGCCACGCAGTGCCAGCCAACGGCGAGATGAGCAGCAGCCACAGCGCCCAGTCCATGGTCTCGGGGTCCCACTGCACTCCGCCACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000354437.8
ENST00000357733.7
ENST00000378280.5
ENST00000378285.5
ENST00000378288.8
ENST00000378290.4
ENST00000378295.9
ENST00000603362.5
ENST00000604566.1
CDS-3UTR CAA 90 bp GAGCAGCTGCTGCGCGGTGCTGTAGTCGTGGCCCTGCTTCAGGTCCTGCAGGCCCTGGCGGCCCCGTTCTaGGCGGAGCTCTCGTTCAGG +
Preference number: 5 (lower is better)
Translates to: EQLLRGAVVVALLQVLQALAAPF*AELSFR
Trigger: CCTGAACGAGAGCTCCGCCAAGAACGGGGCCGCCAG...GGCCTGCAGGACCTGAAGCAGGGCCACGACTACAGCACCGCGCAGCAGCTGCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR CAA 90 bp GGGCCTTGCAGTCGGGCAGGTCGAAGCCGAAGTCCGCCCACTCGTCAGGGCCGCTGCTTGAAGGCACGCTaGCTGGCGGCCCCGTTCTTG +
Preference number: 5 (lower is better)
Translates to: GPCSRAGRSRSPPTRQGRCLKAR*LAAPFL
Trigger: CAAGAACGGGGCCGCCAGCAAGCGTGCCTTCAAGCA...GCGGCCCTGACGAGTGGGCGGACTTCGGCTTCGACCTGCCCGACTGCAAGGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR CAA 90 bp GTGCTCCGGGACGGTCAAGGTTCGGCCACCAAGGCTCAGGCTGCTCCTCGTGGACCTGGGCCGCCGCGGTaGGGGATGGTGATGGTGTGG +
Preference number: 5 (lower is better)
Translates to: VLRDGQGSATKAQAAPRGPGPPR*GMVMVW
Trigger: CCACACCATCACCATCCCCAACCGCGGCGGCCCAGG...TCCACGAGGAGCAGCCTGAGCCTTGGTGGCCGAACCTTGACCGTCCCGGAGCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CAA 90 bp CGCTGCAGTTCCCCTGAGCCGCCGATGGAGATGGTGGCCGCGTTGCTAGAGCGGGGCTGCTTGCGGGCCTaGCAGTCGGGCAGGTCGAAG +
Preference number: 5 (lower is better)
Translates to: RCSSPEPPMEMVAALLERGCLRA*QSGRSK
Trigger: CTTCGACCTGCCCGACTGCAAGGCCCGCAAGCAGCC...CCGCTCTAGCAACGCGGCCACCATCTCCATCGGCGGCTCAGGGGAACTGCAGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR CAA 90 bp CCTTGCAGTCGGGCAGGTCGAAGCCGAAGTCCGCCCACTCGTCAGGGCCGCCGCTCCGTGAACTCCTCCTaGATGGGCTGCTTGCGGGCC +
Preference number: 5 (lower is better)
Translates to: PCSRAGRSRSPPTRQGRRSVNSS*MGCLRA
Trigger: GGCCCGCAAGCAGCCCATCAAGGAGGAGTTCACGGA...GCGGCGGCCCTGACGAGTGGGCGGACTTCGGCTTCGACCTGCCCGACTGCAAGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR CAA 90 bp TGCGCTGGGCTGAGGAACCCCGGGTGTCAGGATGGGCCCCCGCGGCTCCTGAAGTCCGTGAACTCCTCCTaGATGGGCTGCTTGCGGGCC +
Preference number: 5 (lower is better)
Translates to: CAGLRNPGCQDGPPRLLKSVNSS*MGCLRA
Trigger: GGCCCGCAAGCAGCCCATCAAGGAGGAGTTCACGGA...CTTCAGGAGCCGCGGGGGCCCATCCTGACACCCGGGGTTCCTCAGCCCAGCGCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CAA 90 bp GGCAGGAAGGAGGCGGTCCTGCAGAATACAGCGTGCTGGGGGCAGAGGCCAGTCGGGATGGGCCGGACCTaGCCTTTCCCCGGGCACAGC +
Preference number: 5 (lower is better)
Translates to: GRKEAVLQNTACWGQRPVGMGRT*PFPGHS
Trigger: GCTGTGCCCGGGGAAAGGCAAGGTCCGGCCCATCCC...GACTGGCCTCTGCCCCCAGCACGCTGTATTCTGCAGGACCGCCTCCTTCCTGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CAA 90 bp CTGCTTGCGGGCCTTGCAGTCGGGCAGGTCGAAGCCGAAGTCCGCCCACTCGTCCACTGCCTGTCCCCCTaGGCCCCAGGAGTGCCAGCA +
Preference number: 5 (lower is better)
Translates to: LLAGLAVGQVEAEVRPLVHCLSP*APGVPA
Trigger: TGCTGGCACTCCTGGGGCCAAGGGGGACAGGCAGTG...GACGAGTGGGCGGACTTCGGCTTCGACCTGCCCGACTGCAAGGCCCGCAAGCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000604074.5
CDS-3UTR CAA 90 bp GGGCCTTGCAGTCGGGCAGGTCGAAGCCGAAGTCCGCCCACTCGTCAGGGCCGCTGGCCCACCAGCTGGTaGACGGAGGGCAGCTTGTTC +
Preference number: 5 (lower is better)
Translates to: GPCSRAGRSRSPPTRQGRWPTSW*TEGSLF
Trigger: GAACAAGCTGCCCTCCGTCAACCAGCTGGTGGGCCA...GCGGCCCTGACGAGTGGGCGGACTTCGGCTTCGACCTGCCCGACTGCAAGGCCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354437.8
ENST00000378285.5
CDS-3UTR CAA 90 bp TCGGGTAGCAGGTGCCCAGCCCCCAAGAGATGGGTGTGGTGCCTGGGGCATGGGCCCACGGGCCCCAGGTaGGGTGTAGCTGCCGAACTG +
Preference number: 5 (lower is better)
Translates to: SGSRCPAPKRWVWCLGHGPTGPR*GVAAEL
Trigger: CAGTTCGGCAGCTACACCCAACCTGGGGCCCGTGGG...CCCATGCCCCAGGCACCACACCCATCTCTTGGGGGCTGGGCACCTGCTACCCGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000378288.8
ENST00000378295.9
CDS-3UTR CAA 90 bp GGCTGCTTGCGGGCCTTGCAGTCGGGCAGGTCGAAGCCGAAGTCCGCCCACTCGCTGCTCATCTCGCCGTaGGCTGGCACTGCGTGGCCA +
Preference number: 5 (lower is better)
Translates to: GCLRALQSGRSKPKSAHSLLISP*AGTAWP
Trigger: TGGCCACGCAGTGCCAGCCAACGGCGAGATGAGCAG...CGAGTGGGCGGACTTCGGCTTCGACCTGCCCGACTGCAAGGCCCGCAAGCAGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
CDS CCA 90 bp GACCATGGACTGGGCGCTGTGGCTGCTGCTCATCTCGCCGTTGGCTaGCACTGCGTGGCCATGGTTGTTGAGCATCCCGGGGCCCACGGG +
Preference number: 5 (lower is better)
Translates to: DHGLGAVAAAHLAVG*HCVAMVVEHPGAHG
Trigger: CCCGTGGGCCCCGGGATGCTCAACAACCATGGCCACGCAGTGCCAGCCAACGGCGAGATGAGCAGCAGCCACAGCGCCCAGTCCATGGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354437.8
ENST00000378285.5
ENST00000378288.8
ENST00000378290.4
ENST00000378295.9
CDS-3UTR CAA 90 bp GCAGAGAGAGTCCCCAGCCCCCGGCGCGGGCAAGACGCAGTTAGGGACATTCCCCTCCCGAGCTCGTGGTaGGGGCAGCGTTTCACGACG +
Preference number: 5 (lower is better)
Translates to: AERVPSPRRGQDAVRDIPLPSSW*GQRFTT
Trigger: CGTCGTGAAACGCTGCCCCAACCACGAGCTCGGGAG...GGGAATGTCCCTAACTGCGTCTTGCCCGCGCCGGGGGCTGGGGACTCTCTCTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CAA 90 bp GTGTCAGGATGGGCCCCCGCGGCTCCTGAAGTGGAACATGGGGGAAGAGTGGGGCTGGCGGCCCCGTTCTaGGCGGAGCTCTCGTTCAGG +
Preference number: 5 (lower is better)
Translates to: VSGWAPAAPEVEHGGRVGLAAPF*AELSFR
Trigger: CCTGAACGAGAGCTCCGCCAAGAACGGGGCCGCCAG...CCCCACTCTTCCCCCATGTTCCACTTCAGGAGCCGCGGGGGCCCATCCTGACAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CAA 90 bp GATGGTGTGGCGCACGCGGAAGTGCACGGCCTCCATGACCCGCTGGCGCTGCAGTGCTTGAAGGCACGCTaGCTGGCGGCCCCGTTCTTG +
Preference number: 5 (lower is better)
Translates to: DGVAHAEVHGLHDPLALQCLKAR*LAAPFL
Trigger: CAAGAACGGGGCCGCCAGCAAGCGTGCCTTCAAGCA...CTGCAGCGCCAGCGGGTCATGGAGGCCGTGCACTTCCGCGTGCGCCACACCATC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR CAA 90 bp CAGCTGCTGCGCGGTGCTGTAGTCGTGGCCCTGCTTCAGGTCCTGCAGGCCCCGTGCTTGAAGGCACGCTaGCTGGCGGCCCCGTTCTTG +
Preference number: 5 (lower is better)
Translates to: QLLRGAVVVALLQVLQAPCLKAR*LAAPFL
Trigger: CAAGAACGGGGCCGCCAGCAAGCGTGCCTTCAAGCA...CGGGGCCTGCAGGACCTGAAGCAGGGCCACGACTACAGCACCGCGCAGCAGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR CAA 90 bp TGTAGTCGTGGCCCTGCTTCAGGTCCTGCAGGCCCCGCCAGATGGTCATGCGGTCCTGGGCCGCCGCGGTaGGGGATGGTGATGGTGTGG +
Preference number: 5 (lower is better)
Translates to: CSRGPASGPAGPARWSCGPGPPR*GMVMVW
Trigger: CCACACCATCACCATCCCCAACCGCGGCGGCCCAGG...ACCGCATGACCATCTGGCGGGGCCTGCAGGACCTGAAGCAGGGCCACGACTACA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR CAA 90 bp GAGCAGCTGCTGCGCGGTGCTGTAGTCGTGGCCCTGCTTCAGGTCCTGCAGGCCTCCTTGATGGGCTGCTaGCGGGCCTTGCAGTCGGGC +
Preference number: 5 (lower is better)
Translates to: EQLLRGAVVVALLQVLQASLMGC*RALQSG
Trigger: GCCCGACTGCAAGGCCCGCAAGCAGCCCATCAAGGA...GGCCTGCAGGACCTGAAGCAGGGCCACGACTACAGCACCGCGCAGCAGCTGCTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR CAA 90 bp GGCCACCAAGGCTCAGGCTGCTCCTCGTGGATGGAGGTGGCCCCAGAAAGGGCCTCCTTGATGGGCTGCTaGCGGGCCTTGCAGTCGGGC +
Preference number: 5 (lower is better)
Translates to: GHQGSGCSSWMEVAPERASLMGC*RALQSG
Trigger: GCCCGACTGCAAGGCCCGCAAGCAGCCCATCAAGGA...GGCCCTTTCTGGGGCCACCTCCATCCACGAGGAGCAGCCTGAGCCTTGGTGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CAA 90 bp CTGGAAGTCGGAGCCGACGCTGCGGTCCCCACCCACGCCTGCCATGGAGCACGCTTCTGGCCGGCTTCCTaGGACATCTGGCTGGGGTTC +
Preference number: 5 (lower is better)
Translates to: LEVGADAAVPTHACHGARFWPAS*DIWLGF
Trigger: GAACCCCAGCCAGATGTCCAAGGAAGCCGGCCAGAA...GCGTGCTCCATGGCAGGCGTGGGTGGGGACCGCAGCGTCGGCTCCGACTTCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CAA 90 bp CTCCCCACCCGGCCTTCCTGGGAACAAGTCCCGCCCACCTGGCTTCTCACTCAGCACTGCCTGTCCCCCTaGGCCCCAGGAGTGCCAGCA +
Preference number: 5 (lower is better)
Translates to: LPTRPSWEQVPPTWLLTQHCLSP*APGVPA
Trigger: TGCTGGCACTCCTGGGGCCAAGGGGGACAGGCAGTG...CTGAGTGAGAAGCCAGGTGGGCGGGACTTGTTCCCAGGAAGGCCGGGTGGGGAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CAA 90 bp GATGGTGTGGCGCACGCGGAAGTGCACGGCCTCCATGACCCGCTGGCGCTGCAGTTGACGGAGGGCAGCTaGTTCATGCCCCCGTGCACC +
Preference number: 5 (lower is better)
Translates to: DGVAHAEVHGLHDPLALQLTEGS*FMPPCT
Trigger: GGTGCACGGGGGCATGAACAAGCTGCCCTCCGTCAA...CTGCAGCGCCAGCGGGTCATGGAGGCCGTGCACTTCCGCGTGCGCCACACCATC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354437.8
ENST00000378285.5
CDS-3UTR CAA 90 bp CTTCAGGAGGTGGCCTCGGGTAGCAGGTGCCCAGCCCCCAAGAGATGGGTGTGGGCGTGGCCATGGTTGTaGAGCATCCCGGGGCCCACG +
Preference number: 5 (lower is better)
Translates to: LQEVASGSRCPAPKRWVWAWPWL*SIPGPT
Trigger: CGTGGGCCCCGGGATGCTCAACAACCATGGCCACGC...CCACACCCATCTCTTGGGGGCTGGGCACCTGCTACCCGAGGCCACCTCCTGAAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378288.8
ENST00000378295.9
CDS-3UTR CAA 90 bp GGGGATGGTGATGGTGTGGCGCACGCGGAAGTGCACGGCCTCCATGACCCGCTGACTGCGTGGCCATGGTaGTTGAGCATCCCGGGGCCC +
Preference number: 5 (lower is better)
Translates to: GDGDGVAHAEVHGLHDPLTAWPW*LSIPGP
Trigger: GGGCCCCGGGATGCTCAACAACCATGGCCACGCAGT...CAGCGGGTCATGGAGGCCGTGCACTTCCGCGTGCGCCACACCATCACCATCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354437.8
ENST00000378285.5
CDS-3UTR CAA 90 bp GCTGCGCGGTGCTGTAGTCGTGGCCCTGCTTCAGGTCCTGCAGGCCCCGCCAGAGTGCTGCTCAGCAGATaGAACTGGGCCGTGGCGAGG +
Preference number: 5 (lower is better)
Translates to: AARCCSRGPASGPAGPARVLLSR*NWAVAR
Trigger: CCTCGCCACGGCCCAGTTCAATCTGCTGAGCAGCAC...TCTGGCGGGGCCTGCAGGACCTGAAGCAGGGCCACGACTACAGCACCGCGCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378280.5
ENST00000378285.5
CDS GCA 90 bp GCGGAGTGCAGTGGGACCCCGAGACCATGGACTGGGCGCTGTGGCTaGTGCTCATCTCGCCGTTGGCTGGCACTGCGTGGCCATGGTTGT +
Preference number: 5 (lower is better)
Translates to: AECSGTPRPWTGRCG*CSSRRWLALRGHGC
Trigger: ACAACCATGGCCACGCAGTGCCAGCCAACGGCGAGATGAGCAGCAGCCACAGCGCCCAGTCCATGGTCTCGGGGTCCCACTGCACTCCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000354437.8
ENST00000357733.7
ENST00000378280.5
ENST00000378285.5
ENST00000378288.8
ENST00000378290.4
ENST00000378295.9
ENST00000603362.5
ENST00000604566.1
CDS GCA 90 bp GGACTGGGCGCTGTGGCTGCTGCTCATCTCGCCGTTGGCTGGCACTaGGTGGCCATGGTTGTTGAGCATCCCGGGGCGGCCTCTGTAGGA +
Preference number: 5 (lower is better)
Translates to: GLGAVAAAHLAVGWH*VAMVVEHPGAASVG
Trigger: TCCTACAGAGGCCGCCCCGGGATGCTCAACAACCATGGCCACGCAGTGCCAGCCAACGGCGAGATGAGCAGCAGCCACAGCGCCCAGTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357733.7
ENST00000378280.5
ENST00000603362.5
ENST00000604566.1
CDS GCA 90 bp GGACAGGCGCAGATGCGGCCCTCAAAGGACCGGCGGCCCAGCACCTaGCCACTGTCGGGTGGGCACAGCCAGAATTGTGAGCTCAACCCT +
Preference number: 5 (lower is better)
Translates to: GQAQMRPSKDRRPST*PLSGGHSQNCELNP
Trigger: AGGGTTGAGCTCACAATTCTGGCTGTGCCCACCCGACAGTGGGCAGGTGCTGGGCCGCCGGTCCTTTGAGGGCCGCATCTGCGCCTGTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604566.1
CDS CCA 90 bp CTGTGGCTGCTGCTCATCTCGCCGTTGGCTGGCACTGCGTGGCCATaGTTGTTGAGCATCCCGGGGCCCACGGGCCCCAGGTTGGGTGTA +
Preference number: 5 (lower is better)
Translates to: LWLLLISPLAGTAWP*LLSIPGPTGPRLGV
Trigger: TACACCCAACCTGGGGCCCGTGGGCCCCGGGATGCTCAACAACCATGGCCACGCAGTGCCAGCCAACGGCGAGATGAGCAGCAGCCACAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354437.8
ENST00000378285.5
ENST00000378288.8
ENST00000378290.4
ENST00000378295.9
CDS CCA 90 bp GACCATGGACTGGGCGCTGTGGCTGCTGCTCATCTCGCCGTTGGCTaGCACTGCGTGGCCATGGTTGTTGAGCATCCCGGGGCGGCCTCT +
Preference number: 5 (lower is better)
Translates to: DHGLGAVAAAHLAVG*HCVAMVVEHPGAAS
Trigger: AGAGGCCGCCCCGGGATGCTCAACAACCATGGCCACGCAGTGCCAGCCAACGGCGAGATGAGCAGCAGCCACAGCGCCCAGTCCATGGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357733.7
ENST00000378280.5
ENST00000603362.5
ENST00000604566.1
CDS-3UTR CAA 90 bp AGTTCCCCTGAGCCGCCGATGGAGATGGTGGCCGCGTTGCTAGAGCGGAGCAGCCTCCCGAGCTCGTGGTaGGGGCAGCGTTTCACGACG +
Preference number: 5 (lower is better)
Translates to: SSPEPPMEMVAALLERSSLPSSW*GQRFTT
Trigger: CGTCGTGAAACGCTGCCCCAACCACGAGCTCGGGAG...GCTGCTCCGCTCTAGCAACGCGGCCACCATCTCCATCGGCGGCTCAGGGGAACT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR CAA 90 bp CCTGCTTCAGGTCCTGCAGGCCCCGCCAGATGGTCATGCGGTACTGCTCGGGGACTCCCGAGCTCGTGGTaGGGGCAGCGTTTCACGACG +
Preference number: 5 (lower is better)
Translates to: PASGPAGPARWSCGTARGLPSSW*GQRFTT
Trigger: CGTCGTGAAACGCTGCCCCAACCACGAGCTCGGGAG...TCCCCGAGCAGTACCGCATGACCATCTGGCGGGGCCTGCAGGACCTGAAGCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR CAA 90 bp AGAGCGGAGCAGCTGCTGCGCGGTGCTGTAGTCGTGGCCCTGCTTCAGGTCCTGCTCCCGAGCTCGTGGTaGGGGCAGCGTTTCACGACG +
Preference number: 5 (lower is better)
Translates to: RAEQLLRGAVVVALLQVLLPSSW*GQRFTT
Trigger: CGTCGTGAAACGCTGCCCCAACCACGAGCTCGGGAG...CAGGACCTGAAGCAGGGCCACGACTACAGCACCGCGCAGCAGCTGCTCCGCTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR CAA 90 bp ACGCGGAAGTGCACGGCCTCCATGACCCGCTGGCGCTGCAGTTCCCCTGAGCCGGCAGACTGTCCTTCGTaGAAGTCCCTCCCGAGCTCG +
Preference number: 5 (lower is better)
Translates to: TRKCTASMTRWRCSSPEPADCPS*KSLPSS
Trigger: CGAGCTCGGGAGGGACTTCAACGAAGGACAGTCTGC...CGGCTCAGGGGAACTGCAGCGCCAGCGGGTCATGGAGGCCGTGCACTTCCGCGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR CAA 90 bp GCCGCCGATGGAGATGGTGGCCGCGTTGCTAGAGCGGAGCAGCTGCTGCGCGGTGCAGACTGTCCTTCGTaGAAGTCCCTCCCGAGCTCG +
Preference number: 5 (lower is better)
Translates to: AADGDGGRVARAEQLLRGADCPS*KSLPSS
Trigger: CGAGCTCGGGAGGGACTTCAACGAAGGACAGTCTGC...ACCGCGCAGCAGCTGCTCCGCTCTAGCAACGCGGCCACCATCTCCATCGGCGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR CAA 90 bp CCCATTGGCCCACCTGCCTGCAATGAAGGGCCTCGTCACACCCGTGAGGCCCCCTGCTTGAAGGCACGCTaGCTGGCGGCCCCGTTCTTG +
Preference number: 5 (lower is better)
Translates to: PIGPPACNEGPRHTREAPCLKAR*LAAPFL
Trigger: CAAGAACGGGGCCGCCAGCAAGCGTGCCTTCAAGCA...GGGGGCCTCACGGGTGTGACGAGGCCCTTCATTGCAGGCAGGTGGGCCAATGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CAA 90 bp GCAGAGAGAGTCCCCAGCCCCCGGCGCGGGCAAGACGCAGTTAGGGACATTCCCTGCTTGAAGGCACGCTaGCTGGCGGCCCCGTTCTTG +
Preference number: 5 (lower is better)
Translates to: AERVPSPRRGQDAVRDIPCLKAR*LAAPFL
Trigger: CAAGAACGGGGCCGCCAGCAAGCGTGCCTTCAAGCA...GGGAATGTCCCTAACTGCGTCTTGCCCGCGCCGGGGGCTGGGGACTCTCTCTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CAA 90 bp CTTCAGGAGGTGGCCTCGGGTAGCAGGTGCCCAGCCCCCAAGAGATGGGTGTGGGAGATGGTGGCCGCGTaGCTAGAGCGGAGCAGCTGC +
Preference number: 5 (lower is better)
Translates to: LQEVASGSRCPAPKRWVWEMVAA*LERSSC
Trigger: GCAGCTGCTCCGCTCTAGCAACGCGGCCACCATCTC...CCACACCCATCTCTTGGGGGCTGGGCACCTGCTACCCGAGGCCACCTCCTGAAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CAA 90 bp CGGTGCTGTAGTCGTGGCCCTGCTTCAGGTCCTGCAGGCCCCGCCAGATGGTCAGAGATGGTGGCCGCGTaGCTAGAGCGGAGCAGCTGC +
Preference number: 5 (lower is better)
Translates to: RCCSRGPASGPAGPARWSEMVAA*LERSSC
Trigger: GCAGCTGCTCCGCTCTAGCAACGCGGCCACCATCTC...TGACCATCTGGCGGGGCCTGCAGGACCTGAAGCAGGGCCACGACTACAGCACCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR CAA 90 bp CCTGCACTCTGGGTGGTGTCTCGGCTTGCGTGGGTGAGGGCTCCCATTGGCCCAGAGATGGTGGCCGCGTaGCTAGAGCGGAGCAGCTGC +
Preference number: 5 (lower is better)
Translates to: PALWVVSRLAWVRAPIGPEMVAA*LERSSC
Trigger: GCAGCTGCTCCGCTCTAGCAACGCGGCCACCATCTC...TGGGCCAATGGGAGCCCTCACCCACGCAAGCCGAGACACCACCCAGAGTGCAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CAA 90 bp GCCAGAGCTTCCTGCCCTTCAGCTGGAAGGAGCCGGAAGGAGCTGGAAGGAAGGCCTGGGCCGCCGCGGTaGGGGATGGTGATGGTGTGG +
Preference number: 5 (lower is better)
Translates to: ARASCPSAGRSRKELEGRPGPPR*GMVMVW
Trigger: CCACACCATCACCATCCCCAACCGCGGCGGCCCAGG...CCTTCCTTCCAGCTCCTTCCGGCTCCTTCCAGCTGAAGGGCAGGAAGCTCTGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CAA 90 bp TCCTTGATGGGCTGCTTGCGGGCCTTGCAGTCGGGCAGGTCGAAGCCGAAGTCCGGCTGCTTGCGGGCCTaGCAGTCGGGCAGGTCGAAG +
Preference number: 5 (lower is better)
Translates to: SLMGCLRALQSGRSKPKSGCLRA*QSGRSK
Trigger: CTTCGACCTGCCCGACTGCAAGGCCCGCAAGCAGCC...GGACTTCGGCTTCGACCTGCCCGACTGCAAGGCCCGCAAGCAGCCCATCAAGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR CAA 90 bp GGCAGGAAGGAGGCGGTCCTGCAGAATACAGCGTGCTGGGGGCAGAGGCCAGTCTCCTTGATGGGCTGCTaGCGGGCCTTGCAGTCGGGC +
Preference number: 5 (lower is better)
Translates to: GRKEAVLQNTACWGQRPVSLMGC*RALQSG
Trigger: GCCCGACTGCAAGGCCCGCAAGCAGCCCATCAAGGA...GACTGGCCTCTGCCCCCAGCACGCTGTATTCTGCAGGACCGCCTCCTTCCTGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CAA 90 bp AGAGCGGAGCAGCTGCTGCGCGGTGCTGTAGTCGTGGCCCTGCTTCAGGTCCTGTCCTTGATGGGCTGCTaGCGGGCCTTGCAGTCGGGC +
Preference number: 5 (lower is better)
Translates to: RAEQLLRGAVVVALLQVLSLMGC*RALQSG
Trigger: GCCCGACTGCAAGGCCCGCAAGCAGCCCATCAAGGA...CAGGACCTGAAGCAGGGCCACGACTACAGCACCGCGCAGCAGCTGCTCCGCTCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR CAA 90 bp GGGCAGGAAGGAGGCGGTCCTGCAGAATACAGCGTGCTGGGGGCAGAGGCCAGTTCCTTGATGGGCTGCTaGCGGGCCTTGCAGTCGGGC +
Preference number: 5 (lower is better)
Translates to: GQEGGGPAEYSVLGAEASSLMGC*RALQSG
Trigger: GCCCGACTGCAAGGCCCGCAAGCAGCCCATCAAGGA...ACTGGCCTCTGCCCCCAGCACGCTGTATTCTGCAGGACCGCCTCCTTCCTGCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CAA 90 bp TGGGCGGTGGCGCAGGCTGCAGCCAGGCGAGGCCCTCAGTGGATCTCGGCCTCCCCTCCTGAGGCAGTTTaGGACACACAGGAAGGAGAG +
Preference number: 5 (lower is better)
Translates to: WAVAQAAARRGPQWISASPPEAV*DTQEGE
Trigger: CTCTCCTTCCTGTGTGTCCAAAACTGCCTCAGGAGG...GGAGGCCGAGATCCACTGAGGGCCTCGCCTGGCTGCAGCCTGCGCCACCGCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR CAA 90 bp ACCTTGCCTTTCCCCGGGCACAGCCCGAAGGTCCTGCCTCCTGAGGCAGTTTTGGGGATGGGCCGGACCTaGCCTTTCCCCGGGCACAGC +
Preference number: 5 (lower is better)
Translates to: TLPFPGHSPKVLPPEAVLGMGRT*PFPGHS
Trigger: GCTGTGCCCGGGGAAAGGCAAGGTCCGGCCCATCCC...CAAAACTGCCTCAGGAGGCAGGACCTTCGGGCTGTGCCCGGGGAAAGGCAAGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000346387.8
ENST00000354437.8
ENST00000357733.7
ENST00000378280.5
ENST00000378285.5
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CAA 90 bp GCGGTGGCGCAGGCTGCAGCCAGGCGAGGCCCTCAGTGGATCTCGGCCTCCGTGCAGATTTGCCTGGATTaGCCCTTCCTGGGGTTCCCT +
Preference number: 5 (lower is better)
Translates to: AVAQAAARRGPQWISASVQICLD*PFLGFP
Trigger: AGGGAACCCCAGGAAGGGCAAATCCAGGCAAATCTG...CACGGAGGCCGAGATCCACTGAGGGCCTCGCCTGGCTGCAGCCTGCGCCACCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000604074.5
CDS-3UTR CAA 90 bp TCGGGTAGCAGGTGCCCAGCCCCCAAGAGATGGGTGTGGTGCCTGGGGCATGGGTTGACGGAGGGCAGCTaGTTCATGCCCCCGTGCACC +
Preference number: 5 (lower is better)
Translates to: SGSRCPAPKRWVWCLGHGLTEGS*FMPPCT
Trigger: GGTGCACGGGGGCATGAACAAGCTGCCCTCCGTCAA...CCCATGCCCCAGGCACCACACCCATCTCTTGGGGGCTGGGCACCTGCTACCCGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000378288.8
ENST00000378295.9
CDS-3UTR CAA 90 bp GGACCTTGCCTTTCCCCGGGCACAGCCCGAAGGTCCTGCCTCCTGAGGCAGTTTGCGTGGCCATGGTTGTaGAGCATCCCGGGGCCCACG +
Preference number: 5 (lower is better)
Translates to: GPCLSPGTARRSCLLRQFAWPWL*SIPGPT
Trigger: CGTGGGCCCCGGGATGCTCAACAACCATGGCCACGC...AAACTGCCTCAGGAGGCAGGACCTTCGGGCTGTGCCCGGGGAAAGGCAAGGTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378285.5
ENST00000378288.8
ENST00000378295.9
CDS-3UTR CAA 90 bp GCTGTAGTCGTGGCCCTGCTTCAGGTCCTGCAGGCCCCGCCAGATGGTCATGCGACTGCGTGGCCATGGTaGTTGAGCATCCCGGGGCCC +
Preference number: 5 (lower is better)
Translates to: AVVVALLQVLQAPPDGHATAWPW*LSIPGP
Trigger: GGGCCCCGGGATGCTCAACAACCATGGCCACGCAGT...CGCATGACCATCTGGCGGGGCCTGCAGGACCTGAAGCAGGGCCACGACTACAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354437.8
ENST00000378285.5
CDS-3UTR CAA 90 bp TCGTGGCCCTGCTTCAGGTCCTGCAGGCCCCGCCAGATGGTCATGCGGTACTGCCTGCTCATCTCGCCGTaGGCTGGCACTGCGTGGCCA +
Preference number: 5 (lower is better)
Translates to: SWPCFRSCRPRQMVMRYCLLISP*AGTAWP
Trigger: TGGCCACGCAGTGCCAGCCAACGGCGAGATGAGCAG...GCAGTACCGCATGACCATCTGGCGGGGCCTGCAGGACCTGAAGCAGGGCCACGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
CDS CCA 90 bp CAGCAGGGCCAAGTCCGTCCCCTCTGTGGCCCTTTGGAGGCTGACTaGCTCTGGCCACTCACGTCTAGAGGGGTGGGCACACCCAGACTG +
Preference number: 5 (lower is better)
Translates to: QQGQVRPLCGPLEAD*LWPLTSRGVGTPRL
Trigger: CAGTCTGGGTGTGCCCACCCCTCTAGACGTGAGTGGCCAGAGCCAGTCAGCCTCCAAAGGGCCACAGAGGGGACGGACTTGGCCCTGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000604194.1
CDS CCA 90 bp CGTCTCGCTGCCTGGAGGAGGCAGGTTCTGCAGACCCTAGGGCTGTaGGCCTGTCTCGGACAGACAACTCTTGGCAGCAGAGCCCGTGCC +
Preference number: 5 (lower is better)
Translates to: RLAAWRRQVLQTLGL*ACLGQTTLGSRARA
Trigger: GGCACGGGCTCTGCTGCCAAGAGTTGTCTGTCCGAGACAGGCCCACAGCCCTAGGGTCTGCAGAACCTGCCTCCTCCAGGCAGCGAGACG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604194.1
CDS-3UTR CAA 90 bp GTGTCAGGATGGGCCCCCGCGGCTCCTGAAGTGGAACATGGGGGAAGAGTGGGGTGCTTGAAGGCACGCTaGCTGGCGGCCCCGTTCTTG +
Preference number: 5 (lower is better)
Translates to: VSGWAPAAPEVEHGGRVGCLKAR*LAAPFL
Trigger: CAAGAACGGGGCCGCCAGCAAGCGTGCCTTCAAGCA...CCCCACTCTTCCCCCATGTTCCACTTCAGGAGCCGCGGGGGCCCATCCTGACAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CAA 90 bp AGCCAGGCGAGGCCCTCAGTGGATCTCGGCCTCCGTGAACTCCTCCTTGATGGGGAGATGGTGGCCGCGTaGCTAGAGCGGAGCAGCTGC +
Preference number: 5 (lower is better)
Translates to: SQARPSVDLGLRELLLDGEMVAA*LERSSC
Trigger: GCAGCTGCTCCGCTCTAGCAACGCGGCCACCATCTC...CCCATCAAGGAGGAGTTCACGGAGGCCGAGATCCACTGAGGGCCTCGCCTGGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR CAA 90 bp CGAGGCCCTCAGTGGATCTCGGCCTCCGTGAACTCCTCCTTGATGGGCTGCTTGGGCTGCTTGCGGGCCTaGCAGTCGGGCAGGTCGAAG +
Preference number: 5 (lower is better)
Translates to: RGPQWISASVNSSLMGCLGCLRA*QSGRSK
Trigger: CTTCGACCTGCCCGACTGCAAGGCCCGCAAGCAGCC...CAAGCAGCCCATCAAGGAGGAGTTCACGGAGGCCGAGATCCACTGAGGGCCTCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR CAA 90 bp GCCAGAGCTTCCTGCCCTTCAGCTGGAAGGAGCCGGAAGGAGCTGGAAGGAAGGGGCTGCTTGCGGGCCTaGCAGTCGGGCAGGTCGAAG +
Preference number: 5 (lower is better)
Translates to: ARASCPSAGRSRKELEGRGCLRA*QSGRSK
Trigger: CTTCGACCTGCCCGACTGCAAGGCCCGCAAGCAGCC...CCTTCCTTCCAGCTCCTTCCGGCTCCTTCCAGCTGAAGGGCAGGAAGCTCTGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CAA 90 bp AGCCAGGCGAGGCCCTCAGTGGATCTCGGCCTCCGTGAACTCCTCCTTGATGGGTCCTTGATGGGCTGCTaGCGGGCCTTGCAGTCGGGC +
Preference number: 5 (lower is better)
Translates to: SQARPSVDLGLRELLLDGSLMGC*RALQSG
Trigger: GCCCGACTGCAAGGCCCGCAAGCAGCCCATCAAGGA...CCCATCAAGGAGGAGTTCACGGAGGCCGAGATCCACTGAGGGCCTCGCCTGGCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR CAA 90 bp CGGTGCTGTAGTCGTGGCCCTGCTTCAGGTCCTGCAGGCCCCGCCAGATGGTCATCCGTGAACTCCTCCTaGATGGGCTGCTTGCGGGCC +
Preference number: 5 (lower is better)
Translates to: RCCSRGPASGPAGPARWSSVNSS*MGCLRA
Trigger: GGCCCGCAAGCAGCCCATCAAGGAGGAGTTCACGGA...TGACCATCTGGCGGGGCCTGCAGGACCTGAAGCAGGGCCACGACTACAGCACCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR CAA 90 bp CCTGGGCCGCCGCGGTTGGGGATGGTGATGGTGTGGCGCACGCGGAAGTGCACGCCTCCTGAGGCAGTTTaGGACACACAGGAAGGAGAG +
Preference number: 5 (lower is better)
Translates to: PGPPRLGMVMVWRTRKCTPPEAV*DTQEGE
Trigger: CTCTCCTTCCTGTGTGTCCAAAACTGCCTCAGGAGG...CGTGCACTTCCGCGTGCGCCACACCATCACCATCCCCAACCGCGGCGGCCCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR CAA 90 bp GCAGAGAGAGTCCCCAGCCCCCGGCGCGGGCAAGACGCAGTTAGGGACATTCCCTTCTGGCCGGCTTCCTaGGACATCTGGCTGGGGTTC +
Preference number: 5 (lower is better)
Translates to: AERVPSPRRGQDAVRDIPFWPAS*DIWLGF
Trigger: GAACCCCAGCCAGATGTCCAAGGAAGCCGGCCAGAA...GGGAATGTCCCTAACTGCGTCTTGCCCGCGCCGGGGGCTGGGGACTCTCTCTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CAA 90 bp CGGTGCTGTAGTCGTGGCCCTGCTTCAGGTCCTGCAGGCCCCGCCAGATGGTCAATGCCCCCGTGCACCTaGTTCATGGGCGAGAGGACC +
Preference number: 5 (lower is better)
Translates to: RCCSRGPASGPAGPARWSMPPCT*FMGERT
Trigger: GGTCCTCTCGCCCATGAACAAGGTGCACGGGGGCAT...TGACCATCTGGCGGGGCCTGCAGGACCTGAAGCAGGGCCACGACTACAGCACCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354437.8
ENST00000378285.5
CDS-3UTR CAA 90 bp CCTGCACTCTGGGTGGTGTCTCGGCTTGCGTGGGTGAGGGCTCCCATTGGCCCAATGCCCCCGTGCACCTaGTTCATGGGCGAGAGGACC +
Preference number: 5 (lower is better)
Translates to: PALWVVSRLAWVRAPIGPMPPCT*FMGERT
Trigger: GGTCCTCTCGCCCATGAACAAGGTGCACGGGGGCAT...TGGGCCAATGGGAGCCCTCACCCACGCAAGCCGAGACACCACCCAGAGTGCAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378288.8
ENST00000378295.9
CDS-3UTR CAA 90 bp GGCAGGAAGGAGGCGGTCCTGCAGAATACAGCGTGCTGGGGGCAGAGGCCAGTCATGCCCCCGTGCACCTaGTTCATGGGCGAGAGGACC +
Preference number: 5 (lower is better)
Translates to: GRKEAVLQNTACWGQRPVMPPCT*FMGERT
Trigger: GGTCCTCTCGCCCATGAACAAGGTGCACGGGGGCAT...GACTGGCCTCTGCCCCCAGCACGCTGTATTCTGCAGGACCGCCTCCTTCCTGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000378288.8
ENST00000378295.9
CDS-3UTR CAA 90 bp TCGTGGCCCTGCTTCAGGTCCTGCAGGCCCCGCCAGATGGTCATGCGGTACTGCTGGCCCACCAGCTGGTaGACGGAGGGCAGCTTGTTC +
Preference number: 5 (lower is better)
Translates to: SWPCFRSCRPRQMVMRYCWPTSW*TEGSLF
Trigger: GAACAAGCTGCCCTCCGTCAACCAGCTGGTGGGCCA...GCAGTACCGCATGACCATCTGGCGGGGCCTGCAGGACCTGAAGCAGGGCCACGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354437.8
ENST00000378285.5
CDS-3UTR CAA 90 bp CTCCCCACCCGGCCTTCCTGGGAACAAGTCCCGCCCACCTGGCTTCTCACTCAGTGGCCCACCAGCTGGTaGACGGAGGGCAGCTTGTTC +
Preference number: 5 (lower is better)
Translates to: LPTRPSWEQVPPTWLLTQWPTSW*TEGSLF
Trigger: GAACAAGCTGCCCTCCGTCAACCAGCTGGTGGGCCA...CTGAGTGAGAAGCCAGGTGGGCGGGACTTGTTCCCAGGAAGGCCGGGTGGGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378288.8
ENST00000378295.9
CDS-3UTR CAA 90 bp GTAGTCGTGGCCCTGCTTCAGGTCCTGCAGGCCCCGCCAGATGGTCATGCGGTACTGCTCATCTCGCCGTaGGCTGGCACTGCGTGGCCA +
Preference number: 5 (lower is better)
Translates to: VVVALLQVLQAPPDGHAVLLISP*AGTAWP
Trigger: TGGCCACGCAGTGCCAGCCAACGGCGAGATGAGCAG...TACCGCATGACCATCTGGCGGGGCCTGCAGGACCTGAAGCAGGGCCACGACTAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
CDS-3UTR CAA 90 bp GGACCTTGCCTTTCCCCGGGCACAGCCCGAAGGTCCTGCCTCCTGAGGCAGTTTACTGCGTGGCCATGGTaGTTGAGCATCCCGGGGCGG +
Preference number: 5 (lower is better)
Translates to: GPCLSPGTARRSCLLRQFTAWPW*LSIPGR
Trigger: CCGCCCCGGGATGCTCAACAACCATGGCCACGCAGT...AAACTGCCTCAGGAGGCAGGACCTTCGGGCTGTGCCCGGGGAAAGGCAAGGTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357733.7
ENST00000378280.5
CDS-3UTR CAA 90 bp GGCGGTGGCGCAGGCTGCAGCCAGGCGAGGCCCTCAGTGGATCTCGGCCTCCGTCATGCGGGCCGTTTGTaGGCATTTTCGCTTTTCCCA +
Preference number: 5 (lower is better)
Translates to: GGGAGCSQARPSVDLGLRHAGRL*AFSLFP
Trigger: TGGGAAAAGCGAAAATGCCAACAAACGGCCCGCATG...ACGGAGGCCGAGATCCACTGAGGGCCTCGCCTGGCTGCAGCCTGCGCCACCGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378280.5
ENST00000378285.5
CDS-3UTR CAA 90 bp TCGTGGCCCTGCTTCAGGTCCTGCAGGCCCCGCCAGATGGTCATGCGGTACTGCGTGCTGCTCAGCAGATaGAACTGGGCCGTGGCGAGG +
Preference number: 5 (lower is better)
Translates to: SWPCFRSCRPRQMVMRYCVLLSR*NWAVAR
Trigger: CCTCGCCACGGCCCAGTTCAATCTGCTGAGCAGCAC...GCAGTACCGCATGACCATCTGGCGGGGCCTGCAGGACCTGAAGCAGGGCCACGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378280.5
ENST00000378285.5
CDS-3UTR CAA 90 bp GGGTGTCAGGATGGGCCCCCGCGGCTCCTGAAGTGGAACATGGGGGAAGAGTGGGTGCTGCTCAGCAGATaGAACTGGGCCGTGGCGAGG +
Preference number: 5 (lower is better)
Translates to: GCQDGPPRLLKWNMGEEWVLLSR*NWAVAR
Trigger: CCTCGCCACGGCCCAGTTCAATCTGCTGAGCAGCAC...CCACTCTTCCCCCATGTTCCACTTCAGGAGCCGCGGGGGCCCATCCTGACACCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000378288.8
CDS GCA 90 bp AGTGCCAGCAAAGCCCAAATCCACCCACCCGCAGATGCGTCTCGCTaGCTGGAGGAGGCAGGTTCTGCAGACCCTAGGGCTGTGGGCCTG +
Preference number: 5 (lower is better)
Translates to: SASKAQIHPPADASR*LEEAGSADPRAVGL
Trigger: CAGGCCCACAGCCCTAGGGTCTGCAGAACCTGCCTCCTCCAGGCAGCGAGACGCATCTGCGGGTGGGTGGATTTGGGCTTTGCTGGCACT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604194.1
CDS CCA 90 bp TTGGGTGTAGCTGCCGAACTGTGCGGGGGAGGCTGGCCCACCAGCTaGTTGACGGAGGGCAGCTTGTTCATGCCCCCGTGCACCTTGTTC +
Preference number: 5 (lower is better)
Translates to: LGVAAELCGGGWPTS*LTEGSLFMPPCTLF
Trigger: GAACAAGGTGCACGGGGGCATGAACAAGCTGCCCTCCGTCAACCAGCTGGTGGGCCAGCCTCCCCCGCACAGTTCGGCAGCTACACCCAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000354437.8
ENST00000378285.5
ENST00000378288.8
ENST00000378290.4
ENST00000378295.9
CDS CCA 90 bp CCAGCAAAGCCCAAATCCACCCACCCGCAGATGCGTCTCGCTGCCTaGAGGAGGCAGGTTCTGCAGACCCTAGGGCTGTGGGCCTGTCTC +
Preference number: 5 (lower is better)
Translates to: PAKPKSTHPQMRLAA*RRQVLQTLGLWACL
Trigger: GAGACAGGCCCACAGCCCTAGGGTCTGCAGAACCTGCCTCCTCCAGGCAGCGAGACGCATCTGCGGGTGGGTGGATTTGGGCTTTGCTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604194.1
CDS-3UTR CAA 90 bp ACGCGGAAGTGCACGGCCTCCATGACCCGCTGGCGCTGCAGTTCCCCTGAGCCGCATTATTCCCCCGGCTaGACTGGGGAAGGTCGAAGT +
Preference number: 5 (lower is better)
Translates to: TRKCTASMTRWRCSSPEPHYSPG*TGEGRS
Trigger: ACTTCGACCTTCCCCAGTCAAGCCGGGGGAATAATG...CGGCTCAGGGGAACTGCAGCGCCAGCGGGTCATGGAGGCCGTGCACTTCCGCGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000354437.8
ENST00000604074.5
CDS-3UTR CAA 90 bp GGGATGGGCCGGACCTTGCCTTTCCCCGGGCACAGCCCGAAGGTCCTGCCTCCTCATTATTCCCCCGGCTaGACTGGGGAAGGTCGAAGT +
Preference number: 5 (lower is better)
Translates to: GMGRTLPFPGHSPKVLPPHYSPG*TGEGRS
Trigger: ACTTCGACCTTCCCCAGTCAAGCCGGGGGAATAATG...AGGAGGCAGGACCTTCGGGCTGTGCCCGGGGAAAGGCAAGGTCCGGCCCATCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000354437.8
ENST00000357733.7
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CAA 90 bp GAAGGTGGCCGTGGCAAGGGAGGAGCTGCTCCCATGGCAGAGCATTCCTGCAGACTCCCGAGCTCGTGGTaGGGGCAGCGTTTCACGACG +
Preference number: 5 (lower is better)
Translates to: EGGRGKGGAAPMAEHSCRLPSSW*GQRFTT
Trigger: CGTCGTGAAACGCTGCCCCAACCACGAGCTCGGGAG...TCTGCAGGAATGCTCTGCCATGGGAGCAGCTCCTCCCTTGCCACGGCCACCTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CAA 90 bp GGGTGTCAGGATGGGCCCCCGCGGCTCCTGAAGTGGAACATGGGGGAAGAGTGGGCAGACTGTCCTTCGTaGAAGTCCCTCCCGAGCTCG +
Preference number: 5 (lower is better)
Translates to: GCQDGPPRLLKWNMGEEWADCPS*KSLPSS
Trigger: CGAGCTCGGGAGGGACTTCAACGAAGGACAGTCTGC...CCACTCTTCCCCCATGTTCCACTTCAGGAGCCGCGGGGGCCCATCCTGACACCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CAA 90 bp ACCTTGCCTTTCCCCGGGCACAGCCCGAAGGTCCTGCCTCCTGAGGCAGTTTTGGAGATGGTGGCCGCGTaGCTAGAGCGGAGCAGCTGC +
Preference number: 5 (lower is better)
Translates to: TLPFPGHSPKVLPPEAVLEMVAA*LERSSC
Trigger: GCAGCTGCTCCGCTCTAGCAACGCGGCCACCATCTC...CAAAACTGCCTCAGGAGGCAGGACCTTCGGGCTGTGCCCGGGGAAAGGCAAGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000346387.8
ENST00000354437.8
ENST00000357733.7
ENST00000378280.5
ENST00000378285.5
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CAA 90 bp GGACGGTGGGAGAGGGATGCCTGCGTCTTCGTAGACCAGGTACCTGCGGCAACAGAGATGGTGGCCGCGTaGCTAGAGCGGAGCAGCTGC +
Preference number: 5 (lower is better)
Translates to: GRWERDACVFVDQVPAATEMVAA*LERSSC
Trigger: GCAGCTGCTCCGCTCTAGCAACGCGGCCACCATCTC...TGTTGCCGCAGGTACCTGGTCTACGAAGACGCAGGCATCCCTCTCCCACCGTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CAA 90 bp AGCACACTACAGGGGCTCTTGGGACAGCCTCACTGGACTCAGGGTGGACAGGTACCTGGGCCGCCGCGGTaGGGGATGGTGATGGTGTGG +
Preference number: 5 (lower is better)
Translates to: STLQGLLGQPHWTQGGQVPGPPR*GMVMVW
Trigger: CCACACCATCACCATCCCCAACCGCGGCGGCCCAGG...TACCTGTCCACCCTGAGTCCAGTGAGGCTGTCCCAAGAGCCCCTGTAGTGTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CAA 90 bp CACACTACAGGGGCTCTTGGGACAGCCTCACTGGACTCAGGGTGGACAGGTAACGGGATGGGCCGGACCTaGCCTTTCCCCGGGCACAGC +
Preference number: 5 (lower is better)
Translates to: HTTGALGTASLDSGWTGNGMGRT*PFPGHS
Trigger: GCTGTGCCCGGGGAAAGGCAAGGTCCGGCCCATCCC...GTTACCTGTCCACCCTGAGTCCAGTGAGGCTGTCCCAAGAGCCCCTGTAGTGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CAA 90 bp ATGGCAATAAGATGGAGAGCTGAGGTGACATGCAGCTGGGGTGGCTGCGCCACCGGGATGGGCCGGACCTaGCCTTTCCCCGGGCACAGC +
Preference number: 5 (lower is better)
Translates to: MAIRWRAEVTCSWGGCATGMGRT*PFPGHS
Trigger: GCTGTGCCCGGGGAAAGGCAAGGTCCGGCCCATCCC...GGTGGCGCAGCCACCCCAGCTGCATGTCACCTCAGCTCTCCATCTTATTGCCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CAA 90 bp GTGTCAGGATGGGCCCCCGCGGCTCCTGAAGTGGAACATGGGGGAAGAGTGGGGGGGCTGTGTCTAACCTaGCTGTGCCCTGAGGGGCTT +
Preference number: 5 (lower is better)
Translates to: VSGWAPAAPEVEHGGRVGGLCLT*LCPEGL
Trigger: AAGCCCCTCAGGGCACAGCAAGGTTAGACACAGCCC...CCCCACTCTTCCCCCATGTTCCACTTCAGGAGCCGCGGGGGCCCATCCTGACAC
64% GC, longest homopolymer 7 nt, total homopolymer stretches 21 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CAA 90 bp GGCCACCAAGGCTCAGGCTGCTCCTCGTGGATGGAGGTGGCCCCAGAAAGGGCCACACTACAGGGGCTCTaGGGACAGCCTCACTGGACT +
Preference number: 5 (lower is better)
Translates to: GHQGSGCSSWMEVAPERATLQGL*GQPHWT
Trigger: AGTCCAGTGAGGCTGTCCCAAGAGCCCCTGTAGTGT...GGCCCTTTCTGGGGCCACCTCCATCCACGAGGAGCAGCCTGAGCCTTGGTGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CAA 90 bp CCTGCACTCTGGGTGGTGTCTCGGCTTGCGTGGGTGAGGGCTCCCATTGGCCCATTCTGGCCGGCTTCCTaGGACATCTGGCTGGGGTTC +
Preference number: 5 (lower is better)
Translates to: PALWVVSRLAWVRAPIGPFWPAS*DIWLGF
Trigger: GAACCCCAGCCAGATGTCCAAGGAAGCCGGCCAGAA...TGGGCCAATGGGAGCCCTCACCCACGCAAGCCGAGACACCACCCAGAGTGCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CAA 90 bp TCAACAAGCCCTCTGGAACTGAAGCACATCTGCGCTGGGCTGAGGAACCCCGGGCACTGCCTGTCCCCCTaGGCCCCAGGAGTGCCAGCA +
Preference number: 5 (lower is better)
Translates to: STSPLELKHICAGLRNPGHCLSP*APGVPA
Trigger: TGCTGGCACTCCTGGGGCCAAGGGGGACAGGCAGTG...CCCGGGGTTCCTCAGCCCAGCGCAGATGTGCTTCAGTTCCAGAGGGCTTGTTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CAA 90 bp TGTAGTCGTGGCCCTGCTTCAGGTCCTGCAGGCCCCGCCAGATGGTCATGCGGTTTGACGGAGGGCAGCTaGTTCATGCCCCCGTGCACC +
Preference number: 5 (lower is better)
Translates to: CSRGPASGPAGPARWSCGLTEGS*FMPPCT
Trigger: GGTGCACGGGGGCATGAACAAGCTGCCCTCCGTCAA...ACCGCATGACCATCTGGCGGGGCCTGCAGGACCTGAAGCAGGGCCACGACTACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354437.8
ENST00000378285.5
CDS-3UTR CAA 90 bp GGACCTTGCCTTTCCCCGGGCACAGCCCGAAGGTCCTGCCTCCTGAGGCAGTTTTTGACGGAGGGCAGCTaGTTCATGCCCCCGTGCACC +
Preference number: 5 (lower is better)
Translates to: GPCLSPGTARRSCLLRQFLTEGS*FMPPCT
Trigger: GGTGCACGGGGGCATGAACAAGCTGCCCTCCGTCAA...AAACTGCCTCAGGAGGCAGGACCTTCGGGCTGTGCCCGGGGAAAGGCAAGGTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378285.5
ENST00000378288.8
ENST00000378295.9
CDS CCA 90 bp AGAGATCTCACCAGCAGGGCCAAGTCCGTCCCCTCTGTGGCCCTTTaGAGGCTGACTGGCTCTGGCCACTCACGTCTAGAGGGGTGGGCA +
Preference number: 5 (lower is better)
Translates to: RDLTSRAKSVPSVAL*RLTGSGHSRLEGWA
Trigger: TGCCCACCCCTCTAGACGTGAGTGGCCAGAGCCAGTCAGCCTCCAAAGGGCCACAGAGGGGACGGACTTGGCCCTGCTGGTGAGATCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000604194.1
CDS CCA 90 bp GGGCCAGTCTGTCTCCAGGGGCACCGCAGTGAGGACCTGAGCCCTTaGCACGGTGGTTCCACCCCATCTCCTTGGTGCATGCCAATTCCT +
Preference number: 5 (lower is better)
Translates to: GPVCLQGHRSEDLSP*HGGSTPSPWCMPIP
Trigger: AGGAATTGGCATGCACCAAGGAGATGGGGTGGAACCACCGTGCCAAGGGCTCAGGTCCTCACTGCGGTGCCCCTGGAGACAGACTGGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000604194.1
CDS-3UTR CAA 90 bp CAGCTGGGGCCATCTGGCTGCTCCGTGTTCTGGCCGGCTTCCTTGGACATCTGGGCAGACTGTCCTTCGTaGAAGTCCCTCCCGAGCTCG +
Preference number: 5 (lower is better)
Translates to: QLGPSGCSVFWPASLDIWADCPS*KSLPSS
Trigger: CGAGCTCGGGAGGGACTTCAACGAAGGACAGTCTGC...CCAGATGTCCAAGGAAGCCGGCCAGAACACGGAGCAGCCAGATGGCCCCAGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CAA 90 bp GGACCTTGCCTTTCCCCGGGCACAGCCCGAAGGTCCTGCCTCCTGAGGCAGTTTGCAGACTGTCCTTCGTaGAAGTCCCTCCCGAGCTCG +
Preference number: 5 (lower is better)
Translates to: GPCLSPGTARRSCLLRQFADCPS*KSLPSS
Trigger: CGAGCTCGGGAGGGACTTCAACGAAGGACAGTCTGC...AAACTGCCTCAGGAGGCAGGACCTTCGGGCTGTGCCCGGGGAAAGGCAAGGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000346387.8
ENST00000354437.8
ENST00000357733.7
ENST00000378280.5
ENST00000378285.5
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CAA 90 bp ACGCGGAAGTGCACGGCCTCCATGACCCGCTGGCGCTGCAGTTCCCCTGAGCCGTACTGCGAGAGATTATaGCCTTCCACGCGGATGAGG +
Preference number: 5 (lower is better)
Translates to: TRKCTASMTRWRCSSPEPYCERL*PSTRMR
Trigger: CCTCATCCGCGTGGAAGGCAATAATCTCTCGCAGTA...CGGCTCAGGGGAACTGCAGCGCCAGCGGGTCATGGAGGCCGTGCACTTCCGCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR CAA 90 bp AGCACACTACAGGGGCTCTTGGGACAGCCTCACTGGACTCAGGGTGGACAGGTACTGGCGGCCCCGTTCTaGGCGGAGCTCTCGTTCAGG +
Preference number: 5 (lower is better)
Translates to: STLQGLLGQPHWTQGGQVLAAPF*AELSFR
Trigger: CCTGAACGAGAGCTCCGCCAAGAACGGGGCCGCCAG...TACCTGTCCACCCTGAGTCCAGTGAGGCTGTCCCAAGAGCCCCTGTAGTGTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CAA 90 bp GCCAGAGCTTCCTGCCCTTCAGCTGGAAGGAGCCGGAAGGAGCTGGAAGGAAGGTGCTTGAAGGCACGCTaGCTGGCGGCCCCGTTCTTG +
Preference number: 5 (lower is better)
Translates to: ARASCPSAGRSRKELEGRCLKAR*LAAPFL
Trigger: CAAGAACGGGGCCGCCAGCAAGCGTGCCTTCAAGCA...CCTTCCTTCCAGCTCCTTCCGGCTCCTTCCAGCTGAAGGGCAGGAAGCTCTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CAA 90 bp GCTCCGGTTCCCTGCCCTGAAGCTGTGCTCCGGGACGGTCAAGGTTCGGCCACCCCTCCTGAGGCAGTTTaGGACACACAGGAAGGAGAG +
Preference number: 5 (lower is better)
Translates to: APVPCPEAVLRDGQGSATPPEAV*DTQEGE
Trigger: CTCTCCTTCCTGTGTGTCCAAAACTGCCTCAGGAGG...GGTGGCCGAACCTTGACCGTCCCGGAGCACAGCTTCAGGGCAGGGAACCGGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CAA 90 bp GGGCCTTGCAGTCGGGCAGGTCGAAGCCGAAGTCCGCCCACTCGTCAGGGCCGCAGCATTCCTGCAGATTaGCCTGGATTTGCCCTTCCT +
Preference number: 5 (lower is better)
Translates to: GPCSRAGRSRSPPTRQGRSIPAD*PGFALP
Trigger: AGGAAGGGCAAATCCAGGCAAATCTGCAGGAATGCT...GCGGCCCTGACGAGTGGGCGGACTTCGGCTTCGACCTGCCCGACTGCAAGGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604074.5
CDS-3UTR CAA 90 bp GGACCTTGCCTTTCCCCGGGCACAGCCCGAAGGTCCTGCCTCCTGAGGCAGTTTGGGCTGTGTCTAACCTaGCTGTGCCCTGAGGGGCTT +
Preference number: 5 (lower is better)
Translates to: GPCLSPGTARRSCLLRQFGLCLT*LCPEGL
Trigger: AAGCCCCTCAGGGCACAGCAAGGTTAGACACAGCCC...AAACTGCCTCAGGAGGCAGGACCTTCGGGCTGTGCCCGGGGAAAGGCAAGGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CAA 90 bp CTTCAGGAGGTGGCCTCGGGTAGCAGGTGCCCAGCCCCCAAGAGATGGGTGTGGACACTACAGGGGCTCTaGGGACAGCCTCACTGGACT +
Preference number: 5 (lower is better)
Translates to: LQEVASGSRCPAPKRWVWTLQGL*GQPHWT
Trigger: AGTCCAGTGAGGCTGTCCCAAGAGCCCCTGTAGTGT...CCACACCCATCTCTTGGGGGCTGGGCACCTGCTACCCGAGGCCACCTCCTGAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CAA 90 bp AGTTCCCCTGAGCCGCCGATGGAGATGGTGGCCGCGTTGCTAGAGCGGAGCAGCACACTACAGGGGCTCTaGGGACAGCCTCACTGGACT +
Preference number: 5 (lower is better)
Translates to: SSPEPPMEMVAALLERSSTLQGL*GQPHWT
Trigger: AGTCCAGTGAGGCTGTCCCAAGAGCCCCTGTAGTGT...GCTGCTCCGCTCTAGCAACGCGGCCACCATCTCCATCGGCGGCTCAGGGGAACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000604074.5
CDS-3UTR CAA 90 bp TGTAGTCGTGGCCCTGCTTCAGGTCCTGCAGGCCCCGCCAGATGGTCATGCGGTTTCTGGCCGGCTTCCTaGGACATCTGGCTGGGGTTC +
Preference number: 5 (lower is better)
Translates to: CSRGPASGPAGPARWSCGFWPAS*DIWLGF
Trigger: GAACCCCAGCCAGATGTCCAAGGAAGCCGGCCAGAA...ACCGCATGACCATCTGGCGGGGCCTGCAGGACCTGAAGCAGGGCCACGACTACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000604074.5
CDS-3UTR CAA 90 bp CTACAGGGGCTCTTGGGACAGCCTCACTGGACTCAGGGTGGACAGGTAACGTACCACTGCCTGTCCCCCTaGGCCCCAGGAGTGCCAGCA +
Preference number: 5 (lower is better)
Translates to: LQGLLGQPHWTQGGQVTYHCLSP*APGVPA
Trigger: TGCTGGCACTCCTGGGGCCAAGGGGGACAGGCAGTG...GTACGTTACCTGTCCACCCTGAGTCCAGTGAGGCTGTCCCAAGAGCCCCTGTAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CAA 90 bp GCAGAGAGAGTCCCCAGCCCCCGGCGCGGGCAAGACGCAGTTAGGGACATTCCCTCTGACCAGAGCGACTaGGACAGATGTGAGCTGACC +
Preference number: 5 (lower is better)
Translates to: AERVPSPRRGQDAVRDIPSDQSD*DRCELT
Trigger: GGTCAGCTCACATCTGTCCAAGTCGCTCTGGTCAGA...GGGAATGTCCCTAACTGCGTCTTGCCCGCGCCGGGGGCTGGGGACTCTCTCTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CAA 90 bp GCCCTTCCCAGGAGCACACTACAGGGGCTCTTGGGACAGCCTCACTGGACTCAGTGGCCCACCAGCTGGTaGACGGAGGGCAGCTTGTTC +
Preference number: 5 (lower is better)
Translates to: ALPRSTLQGLLGQPHWTQWPTSW*TEGSLF
Trigger: GAACAAGCTGCCCTCCGTCAACCAGCTGGTGGGCCA...CTGAGTCCAGTGAGGCTGTCCCAAGAGCCCCTGTAGTGTGCTCCTGGGAAGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378288.8
ENST00000378295.9
CDS-3UTR CAA 90 bp AGCACACTACAGGGGCTCTTGGGACAGCCTCACTGGACTCAGGGTGGACAGGTAGCGTGGCCATGGTTGTaGAGCATCCCGGGGCCCACG +
Preference number: 5 (lower is better)
Translates to: STLQGLLGQPHWTQGGQVAWPWL*SIPGPT
Trigger: CGTGGGCCCCGGGATGCTCAACAACCATGGCCACGC...TACCTGTCCACCCTGAGTCCAGTGAGGCTGTCCCAAGAGCCCCTGTAGTGTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378288.8
ENST00000378295.9
CDS-3UTR CAA 90 bp CACACTACAGGGGCTCTTGGGACAGCCTCACTGGACTCAGGGTGGACAGGTAACGCGTGGCCATGGTTGTaGAGCATCCCGGGGCGGCCT +
Preference number: 5 (lower is better)
Translates to: HTTGALGTASLDSGWTGNAWPWL*SIPGRP
Trigger: AGGCCGCCCCGGGATGCTCAACAACCATGGCCACGC...GTTACCTGTCCACCCTGAGTCCAGTGAGGCTGTCCCAAGAGCCCCTGTAGTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357733.7
CDS CCA 90 bp AGTAGGTGCTGTCTGGTTCCAGAGAGCTCCAGAGGTGCTCAAACGTaGTGCCCCCATCAGGGGAGGTGGCGGTGGACTGGGCCATCTTCC +
Preference number: 5 (lower is better)
Translates to: SRCCLVPESSRGAQT*CPHQGRWRWTGPSS
Trigger: GGAAGATGGCCCAGTCCACCGCCACCTCCCCTGATGGGGGCACCACGTTTGAGCACCTCTGGAGCTCTCTGGAACCAGACAGCACCTACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000354437.8
ENST00000357733.7
ENST00000378295.9
ENST00000604074.5
CDS CCA 90 bp CTGGCTGGAGCAGACTGTCCTTCGTTGAAGTCCCTCCCGAGCTCGTaGTTGGGGCAGCGTTTCACGACGTCGGTCACGTGCTCCGCTTTC +
Preference number: 5 (lower is better)
Translates to: LAGADCPSLKSLPSS*LGQRFTTSVTCSAF
Trigger: GAAAGCGGAGCACGTGACCGACGTCGTGAAACGCTGCCCCAACCACGAGCTCGGGAGGGACTTCAACGAAGGACAGTCTGCTCCAGCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000346387.8
ENST00000354437.8
ENST00000357733.7
ENST00000378280.5
ENST00000378285.5
ENST00000378288.8
ENST00000378290.4
ENST00000378295.9
ENST00000603362.5
ENST00000603364.5
ENST00000604074.5
ENST00000604479.5
CDS-3UTR CAA 90 bp CTTCAGGAGGTGGCCTCGGGTAGCAGGTGCCCAGCCCCCAAGAGATGGGTGTGGCATTATTCCCCCGGCTaGACTGGGGAAGGTCGAAGT +
Preference number: 5 (lower is better)
Translates to: LQEVASGSRCPAPKRWVWHYSPG*TGEGRS
Trigger: ACTTCGACCTTCCCCAGTCAAGCCGGGGGAATAATG...CCACACCCATCTCTTGGGGGCTGGGCACCTGCTACCCGAGGCCACCTCCTGAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CAA 90 bp CGCTGCAGTTCCCCTGAGCCGCCGATGGAGATGGTGGCCGCGTTGCTAGAGCGGGTGCTGCTCAGCAGATaGAACTGGGCCATGACAGAT +
Preference number: 5 (lower is better)
Translates to: RCSSPEPPMEMVAALLERVLLSR*NWAMTD
Trigger: ATCTGTCATGGCCCAGTTCAATCTGCTGAGCAGCAC...CCGCTCTAGCAACGCGGCCACCATCTCCATCGGCGGCTCAGGGGAACTGCAGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354437.8
ENST00000604074.5
CDS-3UTR CAA 90 bp CAGAGCGACTTGGACAGATGTGAGCTGACCTGCCTGGCGAGCTCCTTCTGCCTTCTCCCGAGCTCGTGGTaGGGGCAGCGTTTCACGACG +
Preference number: 5 (lower is better)
Translates to: QSDLDRCELTCLASSFCLLPSSW*GQRFTT
Trigger: CGTCGTGAAACGCTGCCCCAACCACGAGCTCGGGAG...AAGGCAGAAGGAGCTCGCCAGGCAGGTCAGCTCACATCTGTCCAAGTCGCTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CAA 90 bp GGGGATGGTGATGGTGTGGCGCACGCGGAAGTGCACGGCCTCCATGACCCGCTGTACTGCGAGAGATTATaGCCTTCCACGCGGATGAGG +
Preference number: 5 (lower is better)
Translates to: GDGDGVAHAEVHGLHDPLYCERL*PSTRMR
Trigger: CCTCATCCGCGTGGAAGGCAATAATCTCTCGCAGTA...CAGCGGGTCATGGAGGCCGTGCACTTCCGCGTGCGCCACACCATCACCATCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR CAA 90 bp TGGGCGGTGGCGCAGGCTGCAGCCAGGCGAGGCCCTCAGTGGATCTCGGCCTCCAATACTCGATGCAGTTaGGACACCCCAATCCTGTTA +
Preference number: 5 (lower is better)
Translates to: WAVAQAAARRGPQWISASNTRCS*DTPILL
Trigger: TAACAGGATTGGGGTGTCCAAACTGCATCGAGTATT...GGAGGCCGAGATCCACTGAGGGCCTCGCCTGGCTGCAGCCTGCGCCACCGCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378280.5
CDS-3UTR CAA 90 bp CAGAGCGACTTGGACAGATGTGAGCTGACCTGCCTGGCGAGCTCCTTCTGCCTTGAGATGGTGGCCGCGTaGCTAGAGCGGAGCAGCTGC +
Preference number: 5 (lower is better)
Translates to: QSDLDRCELTCLASSFCLEMVAA*LERSSC
Trigger: GCAGCTGCTCCGCTCTAGCAACGCGGCCACCATCTC...AAGGCAGAAGGAGCTCGCCAGGCAGGTCAGCTCACATCTGTCCAAGTCGCTCTG
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CAA 90 bp AGCACACTACAGGGGCTCTTGGGACAGCCTCACTGGACTCAGGGTGGACAGGTATCCTTGATGGGCTGCTaGCGGGCCTTGCAGTCGGGC +
Preference number: 5 (lower is better)
Translates to: STLQGLLGQPHWTQGGQVSLMGC*RALQSG
Trigger: GCCCGACTGCAAGGCCCGCAAGCAGCCCATCAAGGA...TACCTGTCCACCCTGAGTCCAGTGAGGCTGTCCCAAGAGCCCCTGTAGTGTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CAA 90 bp GGGTGTCAGGATGGGCCCCCGCGGCTCCTGAAGTGGAACATGGGGGAAGAGTGGCCTCCTGAGGCAGTTTaGGACACACAGGAAGGAGAG +
Preference number: 5 (lower is better)
Translates to: GCQDGPPRLLKWNMGEEWPPEAV*DTQEGE
Trigger: CTCTCCTTCCTGTGTGTCCAAAACTGCCTCAGGAGG...CCACTCTTCCCCCATGTTCCACTTCAGGAGCCGCGGGGGCCCATCCTGACACCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CAA 90 bp AGTTCCCCTGAGCCGCCGATGGAGATGGTGGCCGCGTTGCTAGAGCGGAGCAGCCCTCCTGAGGCAGTTTaGGACACACAGGAAGGAGAG +
Preference number: 5 (lower is better)
Translates to: SSPEPPMEMVAALLERSSPPEAV*DTQEGE
Trigger: CTCTCCTTCCTGTGTGTCCAAAACTGCCTCAGGAGG...GCTGCTCCGCTCTAGCAACGCGGCCACCATCTCCATCGGCGGCTCAGGGGAACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR CAA 90 bp GGCCACCAAGGCTCAGGCTGCTCCTCGTGGATGGAGGTGGCCCCAGAAAGGGCCAGAGGATCCTTTCCTTaGGAAGGACCTCGCCTGGTT +
Preference number: 5 (lower is better)
Translates to: GHQGSGCSSWMEVAPERARGSFP*EGPRLV
Trigger: AACCAGGCGAGGTCCTTCCAAAGGAAAGGATCCTCT...GGCCCTTTCTGGGGCCACCTCCATCCACGAGGAGCAGCCTGAGCCTTGGTGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CAA 90 bp GTGCTCCGGGACGGTCAAGGTTCGGCCACCAAGGCTCAGGCTGCTCCTCGTGGACAGATTTGCCTGGATTaGCCCTTCCTGGGGTTCCCT +
Preference number: 5 (lower is better)
Translates to: VLRDGQGSATKAQAAPRGQICLD*PFLGFP
Trigger: AGGGAACCCCAGGAAGGGCAAATCCAGGCAAATCTG...TCCACGAGGAGCAGCCTGAGCCTTGGTGGCCGAACCTTGACCGTCCCGGAGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CAA 90 bp GGGCAGGAAGGAGGCGGTCCTGCAGAATACAGCGTGCTGGGGGCAGAGGCCAGTCAGATTTGCCTGGATTaGCCCTTCCTGGGGTTCCCT +
Preference number: 5 (lower is better)
Translates to: GQEGGGPAEYSVLGAEASQICLD*PFLGFP
Trigger: AGGGAACCCCAGGAAGGGCAAATCCAGGCAAATCTG...ACTGGCCTCTGCCCCCAGCACGCTGTATTCTGCAGGACCGCCTCCTTCCTGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CAA 90 bp GGGATGGGCCGGACCTTGCCTTTCCCCGGGCACAGCCCGAAGGTCCTGCCTCCTAGCATTCCTGCAGATTaGCCTGGATTTGCCCTTCCT +
Preference number: 5 (lower is better)
Translates to: GMGRTLPFPGHSPKVLPPSIPAD*PGFALP
Trigger: AGGAAGGGCAAATCCAGGCAAATCTGCAGGAATGCT...AGGAGGCAGGACCTTCGGGCTGTGCCCGGGGAAAGGCAAGGTCCGGCCCATCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CAA 90 bp GGGCAGGAAGGAGGCGGTCCTGCAGAATACAGCGTGCTGGGGGCAGAGGCCAGTTCTGACCAGAGCGACTaGGACAGATGTGAGCTGACC +
Preference number: 5 (lower is better)
Translates to: GQEGGGPAEYSVLGAEASSDQSD*DRCELT
Trigger: GGTCAGCTCACATCTGTCCAAGTCGCTCTGGTCAGA...ACTGGCCTCTGCCCCCAGCACGCTGTATTCTGCAGGACCGCCTCCTTCCTGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CAA 90 bp GATGGTGTGGCGCACGCGGAAGTGCACGGCCTCCATGACCCGCTGGCGCTGCAGGTGGATGTTTGTGCGTaGGAGACACTGACTGTTCTG +
Preference number: 5 (lower is better)
Translates to: DGVAHAEVHGLHDPLALQVDVCA*ETLTVL
Trigger: CAGAACAGTCAGTGTCTCCAACGCACAAACATCCAC...CTGCAGCGCCAGCGGGTCATGGAGGCCGTGCACTTCCGCGTGCGCCACACCATC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604074.5
CDS-3UTR CAA 90 bp GATGGGCTGCTTGCGGGCCTTGCAGTCGGGCAGGTCGAAGCCGAAGTCCGCCCACAGAGGAGTGGATGTTaGTGCGTTGGAGACACTGAC +
Preference number: 5 (lower is better)
Translates to: DGLLAGLAVGQVEAEVRPQRSGC*CVGDTD
Trigger: GTCAGTGTCTCCAACGCACAAACATCCACTCCTCTG...TGGGCGGACTTCGGCTTCGACCTGCCCGACTGCAAGGCCCGCAAGCAGCCCATC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604074.5
CDS-3UTR CAA 90 bp CAGAGCGACTTGGACAGATGTGAGCTGACCTGCCTGGCGAGCTCCTTCTGCCTTCTGCTCATCTCGCCGTaGGCTGGCACTGCGTGGCCA +
Preference number: 5 (lower is better)
Translates to: QSDLDRCELTCLASSFCLLLISP*AGTAWP
Trigger: TGGCCACGCAGTGCCAGCCAACGGCGAGATGAGCAG...AAGGCAGAAGGAGCTCGCCAGGCAGGTCAGCTCACATCTGTCCAAGTCGCTCTG
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
CDS-3UTR CAA 90 bp ATGGCAATAAGATGGAGAGCTGAGGTGACATGCAGCTGGGGTGGCTGCGCCACCACTGCGTGGCCATGGTaGTTGAGCATCCCGGGGCGG +
Preference number: 5 (lower is better)
Translates to: MAIRWRAEVTCSWGGCATTAWPW*LSIPGR
Trigger: CCGCCCCGGGATGCTCAACAACCATGGCCACGCAGT...GGTGGCGCAGCCACCCCAGCTGCATGTCACCTCAGCTCTCCATCTTATTGCCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357733.7
CDS-3UTR CAA 90 bp CTGCTTGCGGGCCTTGCAGTCGGGCAGGTCGAAGCCGAAGTCCGCCCACTCGTCCATGCGGGCCGTTTGTaGGCATTTTCGCTTTTCCCA +
Preference number: 5 (lower is better)
Translates to: LLAGLAVGQVEAEVRPLVHAGRL*AFSLFP
Trigger: TGGGAAAAGCGAAAATGCCAACAAACGGCCCGCATG...GACGAGTGGGCGGACTTCGGCTTCGACCTGCCCGACTGCAAGGCCCGCAAGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378280.5
ENST00000378285.5
CDS GCA 90 bp GGCACCACGACGCTCTGCCTGCCGGTGACAGGGTCATCCACATACTaGGAGAGATTATTGCCTTCCACGCGGATGAGGTGGCTGGCTGGA +
Preference number: 5 (lower is better)
Translates to: GTTTLCLPVTGSSTY*ERLLPSTRMRWLAG
Trigger: TCCAGCCAGCCACCTCATCCGCGTGGAAGGCAATAATCTCTCGCAGTATGTGGATGACCCTGTCACCGGCAGGCAGAGCGTCGTGGTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000346387.8
ENST00000354437.8
ENST00000357733.7
ENST00000378280.5
ENST00000378285.5
ENST00000378288.8
ENST00000378290.4
ENST00000378295.9
ENST00000603362.5
ENST00000603364.5
ENST00000604074.5
ENST00000604479.5
CDS CCA 90 bp AAACCAAAGATCCCACCTGAGCATGGGGAAGCCGCTGGCCAGTCTTaGCAGAGATCTCACCAGCAGGGCCAAGTCCGTCCCCTCTGTGGC +
Preference number: 5 (lower is better)
Translates to: KPKIPPEHGEAAGQS*QRSHQQGQVRPLCG
Trigger: GCCACAGAGGGGACGGACTTGGCCCTGCTGGTGAGATCTCTGCCAAGACTGGCCAGCGGCTTCCCCATGCTCAGGTGGGATCTTTGGTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000604194.1
CDS-3UTR CAA 90 bp GGGCAGGAAGGAGGCGGTCCTGCAGAATACAGCGTGCTGGGGGCAGAGGCCAGTGTGCTGCTCAGCAGATaGAACTGGGCCATGACAGAT +
Preference number: 5 (lower is better)
Translates to: GQEGGGPAEYSVLGAEASVLLSR*NWAMTD
Trigger: ATCTGTCATGGCCCAGTTCAATCTGCTGAGCAGCAC...ACTGGCCTCTGCCCCCAGCACGCTGTATTCTGCAGGACCGCCTCCTTCCTGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CAA 90 bp TCAACAAGCCCTCTGGAACTGAAGCACATCTGCGCTGGGCTGAGGAACCCCGGGGCAGACTGTCCTTCGTaGAAGTCCCTCCCGAGCTCG +
Preference number: 5 (lower is better)
Translates to: STSPLELKHICAGLRNPGADCPS*KSLPSS
Trigger: CGAGCTCGGGAGGGACTTCAACGAAGGACAGTCTGC...CCCGGGGTTCCTCAGCCCAGCGCAGATGTGCTTCAGTTCCAGAGGGCTTGTTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CAA 90 bp GCTGTAGTCGTGGCCCTGCTTCAGGTCCTGCAGGCCCCGCCAGATGGTCATGCGTACTGCGAGAGATTATaGCCTTCCACGCGGATGAGG +
Preference number: 5 (lower is better)
Translates to: AVVVALLQVLQAPPDGHAYCERL*PSTRMR
Trigger: CCTCATCCGCGTGGAAGGCAATAATCTCTCGCAGTA...CGCATGACCATCTGGCGGGGCCTGCAGGACCTGAAGCAGGGCCACGACTACAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR CAA 90 bp GGAAGGACCTCGCCTGGTTGGGAGATGACAGTCTCTAGGATGAAGCCTGGAAGTCTGGCGGCCCCGTTCTaGGCGGAGCTCTCGTTCAGG +
Preference number: 5 (lower is better)
Translates to: GRTSPGWEMTVSRMKPGSLAAPF*AELSFR
Trigger: CCTGAACGAGAGCTCCGCCAAGAACGGGGCCGCCAG...ACTTCCAGGCTTCATCCTAGAGACTGTCATCTCCCAACCAGGCGAGGTCCTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CAA 90 bp TGCGCTGGGCTGAGGAACCCCGGGTGTCAGGATGGGCCCCCGCGGCTCCTGAAGAATACTCGATGCAGTTaGGACACCCCAATCCTGTTA +
Preference number: 5 (lower is better)
Translates to: CAGLRNPGCQDGPPRLLKNTRCS*DTPILL
Trigger: TAACAGGATTGGGGTGTCCAAACTGCATCGAGTATT...CTTCAGGAGCCGCGGGGGCCCATCCTGACACCCGGGGTTCCTCAGCCCAGCGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000346387.8
ENST00000378288.8
ENST00000378295.9
CDS-3UTR CAA 90 bp CCCCAAGAGATGGGTGTGGTGCCTGGGGCATGGGTCTTAGCCTTTCTGGTCTCATCCGTGAACTCCTCCTaGATGGGCTGCTTGCGGGCC +
Preference number: 5 (lower is better)
Translates to: PQEMGVVPGAWVLAFLVSSVNSS*MGCLRA
Trigger: GGCCCGCAAGCAGCCCATCAAGGAGGAGTTCACGGA...TGAGACCAGAAAGGCTAAGACCCATGCCCCAGGCACCACACCCATCTCTTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CAA 90 bp GGCCTGGTGGGAACGCTGGGGGAATGGGGGAGAGTCGCTGTTTCTGACCAGAGCCCTCCTGAGGCAGTTTaGGACACACAGGAAGGAGAG +
Preference number: 5 (lower is better)
Translates to: GLVGTLGEWGRVAVSDQSPPEAV*DTQEGE
Trigger: CTCTCCTTCCTGTGTGTCCAAAACTGCCTCAGGAGG...GCTCTGGTCAGAAACAGCGACTCTCCCCCATTCCCCCAGCGTTCCCACCAGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CAA 90 bp TCCTTGATGGGCTGCTTGCGGGCCTTGCAGTCGGGCAGGTCGAAGCCGAAGTCCCCTCCTGAGGCAGTTTaGGACACACAGGAAGGAGAG +
Preference number: 5 (lower is better)
Translates to: SLMGCLRALQSGRSKPKSPPEAV*DTQEGE
Trigger: CTCTCCTTCCTGTGTGTCCAAAACTGCCTCAGGAGG...GGACTTCGGCTTCGACCTGCCCGACTGCAAGGCCCGCAAGCAGCCCATCAAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354437.8
ENST00000378280.5
ENST00000378285.5
ENST00000604074.5
CDS-3UTR CAA 90 bp CTCCCCACCCGGCCTTCCTGGGAACAAGTCCCGCCCACCTGGCTTCTCACTCAGTCAGCAACACTGTGGTaGTTGTTAGGGGCAGGAAGG +
Preference number: 5 (lower is better)
Translates to: LPTRPSWEQVPPTWLLTQSATLW*LLGAGR
Trigger: CCTTCCTGCCCCTAACAACAACCACAGTGTTGCTGA...CTGAGTGAGAAGCCAGGTGGGCGGGACTTGTTCCCAGGAAGGCCGGGTGGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CAA 90 bp GCTGTAGTCGTGGCCCTGCTTCAGGTCCTGCAGGCCCCGCCAGATGGTCATGCGTCAGCAACACTGTGGTaGTTGTTAGGGGCAGGAAGG +
Preference number: 5 (lower is better)
Translates to: AVVVALLQVLQAPPDGHASATLW*LLGAGR
Trigger: CCTTCCTGCCCCTAACAACAACCACAGTGTTGCTGA...CGCATGACCATCTGGCGGGGCCTGCAGGACCTGAAGCAGGGCCACGACTACAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000604074.5
CDS-3UTR CAA 90 bp GCTCCGGTTCCCTGCCCTGAAGCTGTGCTCCGGGACGGTCAAGGTTCGGCCACCCTCATGGGCGCTAGGTaGAACTCCAAAGAGAATGCT +
Preference number: 5 (lower is better)
Translates to: APVPCPEAVLRDGQGSATLMGAR*NSKENA
Trigger: AGCATTCTCTTTGGAGTTCAACCTAGCGCCCATGAG...GGTGGCCGAACCTTGACCGTCCCGGAGCACAGCTTCAGGGCAGGGAACCGGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CAA 90 bp GTAGTCGTGGCCCTGCTTCAGGTCCTGCAGGCCCCGCCAGATGGTCATGCGGTATCTGACCAGAGCGACTaGGACAGATGTGAGCTGACC +
Preference number: 5 (lower is better)
Translates to: VVVALLQVLQAPPDGHAVSDQSD*DRCELT
Trigger: GGTCAGCTCACATCTGTCCAAGTCGCTCTGGTCAGA...TACCGCATGACCATCTGGCGGGGCCTGCAGGACCTGAAGCAGGGCCACGACTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000604074.5
CDS-3UTR CAA 90 bp GGCAGGAAGGAGGCGGTCCTGCAGAATACAGCGTGCTGGGGGCAGAGGCCAGTCCAGAGGAGTGGATGTTaGTGCGTTGGAGACACTGAC +
Preference number: 5 (lower is better)
Translates to: GRKEAVLQNTACWGQRPVQRSGC*CVGDTD
Trigger: GTCAGTGTCTCCAACGCACAAACATCCACTCCTCTG...GACTGGCCTCTGCCCCCAGCACGCTGTATTCTGCAGGACCGCCTCCTTCCTGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CAA 90 bp TTTCACAGCTGCTTCTCCAGTGCAAGGAGGCTGCATGGGCTCCCTAGACAGGTGCTGCTCATCTCGCCGTaGGCTGGCACTGCGTGGCCA +
Preference number: 5 (lower is better)
Translates to: FHSCFSSARRLHGLPRQVLLISP*AGTAWP
Trigger: TGGCCACGCAGTGCCAGCCAACGGCGAGATGAGCAG...CACCTGTCTAGGGAGCCCATGCAGCCTCCTTGCACTGGAGAAGCAGCTGTGAAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
CDS-3UTR CAA 90 bp CGAGGCCCTCAGTGGATCTCGGCCTCCGTGAACTCCTCCTTGATGGGCTGCTTGCATTATTCCCCCGGCTaGACTGGGGAAGGTCGAAGT +
Preference number: 5 (lower is better)
Translates to: RGPQWISASVNSSLMGCLHYSPG*TGEGRS
Trigger: ACTTCGACCTTCCCCAGTCAAGCCGGGGGAATAATG...CAAGCAGCCCATCAAGGAGGAGTTCACGGAGGCCGAGATCCACTGAGGGCCTCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354437.8
ENST00000604074.5
CDS-3UTR CAA 90 bp AGCCAGGCGAGGCCCTCAGTGGATCTCGGCCTCCGTGAACTCCTCCTTGATGGGGTGCTGCTCAGCAGATaGAACTGGGCCATGACAGAT +
Preference number: 5 (lower is better)
Translates to: SQARPSVDLGLRELLLDGVLLSR*NWAMTD
Trigger: ATCTGTCATGGCCCAGTTCAATCTGCTGAGCAGCAC...CCCATCAAGGAGGAGTTCACGGAGGCCGAGATCCACTGAGGGCCTCGCCTGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354437.8
ENST00000604074.5
CDS-3UTR CAA 90 bp GCATTCCTGCAGATTTGCCTGGATTTGCCCTTCCTGGGGTTCCCTCTAGGCTTCGAGATGGTGGCCGCGTaGCTAGAGCGGAGCAGCTGC +
Preference number: 5 (lower is better)
Translates to: AFLQICLDLPFLGFPLGFEMVAA*LERSSC
Trigger: GCAGCTGCTCCGCTCTAGCAACGCGGCCACCATCTC...GAAGCCTAGAGGGAACCCCAGGAAGGGCAAATCCAGGCAAATCTGCAGGAATGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CAA 90 bp CTGGAAGTCGGAGCCGACGCTGCGGTCCCCACCCACGCCTGCCATGGAGCACGCGTCGCAAAATACTTTTaGGCAGTCCATCAGCAAAGA +
Preference number: 5 (lower is better)
Translates to: LEVGADAAVPTHACHGARVAKYF*AVHQQR
Trigger: TCTTTGCTGATGGACTGCCAAAAAGTATTTTGCGAC...GCGTGCTCCATGGCAGGCGTGGGTGGGGACCGCAGCGTCGGCTCCGACTTCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CAA 90 bp CCTGCTTCAGGTCCTGCAGGCCCCGCCAGATGGTCATGCGGTACTGCTCGGGGACTCATGGGCGCTAGGTaGAACTCCAAAGAGAATGCT +
Preference number: 5 (lower is better)
Translates to: PASGPAGPARWSCGTARGLMGAR*NSKENA
Trigger: AGCATTCTCTTTGGAGTTCAACCTAGCGCCCATGAG...TCCCCGAGCAGTACCGCATGACCATCTGGCGGGGCCTGCAGGACCTGAAGCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000604074.5
CDS-3UTR CAA 90 bp GAAGGTGGCCGTGGCAAGGGAGGAGCTGCTCCCATGGCAGAGCATTCCTGCAGACAGATTTGCCTGGATTaGCCCTTCCTGGGGTTCCCT +
Preference number: 5 (lower is better)
Translates to: EGGRGKGGAAPMAEHSCRQICLD*PFLGFP
Trigger: AGGGAACCCCAGGAAGGGCAAATCCAGGCAAATCTG...TCTGCAGGAATGCTCTGCCATGGGAGCAGCTCCTCCCTTGCCACGGCCACCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CAA 90 bp GGCAGGAAGGAGGCGGTCCTGCAGAATACAGCGTGCTGGGGGCAGAGGCCAGTCAGCATTCCTGCAGATTaGCCTGGATTTGCCCTTCCT +
Preference number: 5 (lower is better)
Translates to: GRKEAVLQNTACWGQRPVSIPAD*PGFALP
Trigger: AGGAAGGGCAAATCCAGGCAAATCTGCAGGAATGCT...GACTGGCCTCTGCCCCCAGCACGCTGTATTCTGCAGGACCGCCTCCTTCCTGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CAA 90 bp ATGGCAATAAGATGGAGAGCTGAGGTGACATGCAGCTGGGGTGGCTGCGCCACCGGGCTGTGTCTAACCTaGCTGTGCCCTGAGGGGCTT +
Preference number: 5 (lower is better)
Translates to: MAIRWRAEVTCSWGGCATGLCLT*LCPEGL
Trigger: AAGCCCCTCAGGGCACAGCAAGGTTAGACACAGCCC...GGTGGCGCAGCCACCCCAGCTGCATGTCACCTCAGCTCTCCATCTTATTGCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CAA 90 bp CTTCAGGAGGTGGCCTCGGGTAGCAGGTGCCCAGCCCCCAAGAGATGGGTGTGGGTGGATGTTTGTGCGTaGGAGACACTGACTGTTCTG +
Preference number: 5 (lower is better)
Translates to: LQEVASGSRCPAPKRWVWVDVCA*ETLTVL
Trigger: CAGAACAGTCAGTGTCTCCAACGCACAAACATCCAC...CCACACCCATCTCTTGGGGGCTGGGCACCTGCTACCCGAGGCCACCTCCTGAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CAA 90 bp TGCGCTGGGCTGAGGAACCCCGGGTGTCAGGATGGGCCCCCGCGGCTCCTGAAGCATTACCAAAAACAGTaGTTATGTCATTGGAGGGCG +
Preference number: 5 (lower is better)
Translates to: CAGLRNPGCQDGPPRLLKHYQKQ*LCHWRA
Trigger: CGCCCTCCAATGACATAACAACTGTTTTTGGTAATG...CTTCAGGAGCCGCGGGGGCCCATCCTGACACCCGGGGTTCCTCAGCCCAGCGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CAA 90 bp GGAAGGACCTCGCCTGGTTGGGAGATGACAGTCTCTAGGATGAAGCCTGGAAGTACTGCGTGGCCATGGTaGTTGAGCATCCCGGGGCCC +
Preference number: 5 (lower is better)
Translates to: GRTSPGWEMTVSRMKPGSTAWPW*LSIPGP
Trigger: GGGCCCCGGGATGCTCAACAACCATGGCCACGCAGT...ACTTCCAGGCTTCATCCTAGAGACTGTCATCTCCCAACCAGGCGAGGTCCTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378288.8
ENST00000378295.9
CDS CCA 90 bp TCTGCAGACCCTAGGGCTGTGGGCCTGTCTCGGACAGACAACTCTTaGCAGCAGAGCCCGTGCCTCTGTCCAGGACAGGATTTCAAACCA +
Preference number: 5 (lower is better)
Translates to: SADPRAVGLSRTDNS*QQSPCLCPGQDFKP
Trigger: TGGTTTGAAATCCTGTCCTGGACAGAGGCACGGGCTCTGCTGCCAAGAGTTGTCTGTCCGAGACAGGCCCACAGCCCTAGGGTCTGCAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604194.1
CDS-3UTR CAA 90 bp GCCAGAGCTTCCTGCCCTTCAGCTGGAAGGAGCCGGAAGGAGCTGGAAGGAAGGGTGCTGCTCAGCAGATaGAACTGGGCCATGACAGAT +
Preference number: 5 (lower is better)
Translates to: ARASCPSAGRSRKELEGRVLLSR*NWAMTD
Trigger: ATCTGTCATGGCCCAGTTCAATCTGCTGAGCAGCAC...CCTTCCTTCCAGCTCCTTCCGGCTCCTTCCAGCTGAAGGGCAGGAAGCTCTGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CAA 90 bp GCCAGAGCTTCCTGCCCTTCAGCTGGAAGGAGCCGGAAGGAGCTGGAAGGAAGGTACTGCGAGAGATTATaGCCTTCCACGCGGATGAGG +
Preference number: 5 (lower is better)
Translates to: ARASCPSAGRSRKELEGRYCERL*PSTRMR
Trigger: CCTCATCCGCGTGGAAGGCAATAATCTCTCGCAGTA...CCTTCCTTCCAGCTCCTTCCGGCTCCTTCCAGCTGAAGGGCAGGAAGCTCTGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CAA 90 bp GGACGGTGGGAGAGGGATGCCTGCGTCTTCGTAGACCAGGTACCTGCGGCAACATACTGCGAGAGATTATaGCCTTCCACGCGGATGAGG +
Preference number: 5 (lower is better)
Translates to: GRWERDACVFVDQVPAATYCERL*PSTRMR
Trigger: CCTCATCCGCGTGGAAGGCAATAATCTCTCGCAGTA...TGTTGCCGCAGGTACCTGGTCTACGAAGACGCAGGCATCCCTCTCCCACCGTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CAA 90 bp GCAGAGAGAGTCCCCAGCCCCCGGCGCGGGCAAGACGCAGTTAGGGACATTCCCAATACTCGATGCAGTTaGGACACCCCAATCCTGTTA +
Preference number: 5 (lower is better)
Translates to: AERVPSPRRGQDAVRDIPNTRCS*DTPILL
Trigger: TAACAGGATTGGGGTGTCCAAACTGCATCGAGTATT...GGGAATGTCCCTAACTGCGTCTTGCCCGCGCCGGGGGCTGGGGACTCTCTCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000346387.8
ENST00000378288.8
ENST00000378295.9
CDS-3UTR CAA 90 bp GCCCTTCCCAGGAGCACACTACAGGGGCTCTTGGGACAGCCTCACTGGACTCAGAGAGGATCCTTTCCTTaGGAAGGACCTCGCCTGGTT +
Preference number: 5 (lower is better)
Translates to: ALPRSTLQGLLGQPHWTQRGSFP*EGPRLV
Trigger: AACCAGGCGAGGTCCTTCCAAAGGAAAGGATCCTCT...CTGAGTCCAGTGAGGCTGTCCCAAGAGCCCCTGTAGTGTGCTCCTGGGAAGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CAA 90 bp CTCCCCACCCGGCCTTCCTGGGAACAAGTCCCGCCCACCTGGCTTCTCACTCAGTTCAGACACAGTCACTaGGCTGCTCACTACTATCCA +
Preference number: 5 (lower is better)
Translates to: LPTRPSWEQVPPTWLLTQFRHSH*AAHYYP
Trigger: TGGATAGTAGTGAGCAGCCAAGTGACTGTGTCTGAA...CTGAGTGAGAAGCCAGGTGGGCGGGACTTGTTCCCAGGAAGGCCGGGTGGGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CAA 90 bp GAAGGTGGCCGTGGCAAGGGAGGAGCTGCTCCCATGGCAGAGCATTCCTGCAGATCAGCAACACTGTGGTaGTTGTTAGGGGCAGGAAGG +
Preference number: 5 (lower is better)
Translates to: EGGRGKGGAAPMAEHSCRSATLW*LLGAGR
Trigger: CCTTCCTGCCCCTAACAACAACCACAGTGTTGCTGA...TCTGCAGGAATGCTCTGCCATGGGAGCAGCTCCTCCCTTGCCACGGCCACCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CAA 90 bp GGGATGGGCCGGACCTTGCCTTTCCCCGGGCACAGCCCGAAGGTCCTGCCTCCTCATTACCAAAAACAGTaGTTATGTCATTGGAGGGCG +
Preference number: 5 (lower is better)
Translates to: GMGRTLPFPGHSPKVLPPHYQKQ*LCHWRA
Trigger: CGCCCTCCAATGACATAACAACTGTTTTTGGTAATG...AGGAGGCAGGACCTTCGGGCTGTGCCCGGGGAAAGGCAAGGTCCGGCCCATCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CAA 90 bp GCCAGAGCTTCCTGCCCTTCAGCTGGAAGGAGCCGGAAGGAGCTGGAAGGAAGGCATGCGGGCCGTTTGTaGGCATTTTCGCTTTTCCCA +
Preference number: 5 (lower is better)
Translates to: ARASCPSAGRSRKELEGRHAGRL*AFSLFP
Trigger: TGGGAAAAGCGAAAATGCCAACAAACGGCCCGCATG...CCTTCCTTCCAGCTCCTTCCGGCTCCTTCCAGCTGAAGGGCAGGAAGCTCTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378288.8
CDS-3UTR CAA 90 bp GGACCTTGCCTTTCCCCGGGCACAGCCCGAAGGTCCTGCCTCCTGAGGCAGTTTGAACATGCGGGCCGTTaGTTGGCATTTTCGCTTTTC +
Preference number: 5 (lower is better)
Translates to: GPCLSPGTARRSCLLRQFEHAGR*LAFSLF
Trigger: GAAAAGCGAAAATGCCAACAAACGGCCCGCATGTTC...AAACTGCCTCAGGAGGCAGGACCTTCGGGCTGTGCCCGGGGAAAGGCAAGGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000378280.5
ENST00000378285.5
ENST00000378288.8
CDS-3UTR CAA 90 bp AGCCAGGCGAGGCCCTCAGTGGATCTCGGCCTCCGTGAACTCCTCCTTGATGGGGAACATGCGGGCCGTTaGTTGGCATTTTCGCTTTTC +
Preference number: 5 (lower is better)
Translates to: SQARPSVDLGLRELLLDGEHAGR*LAFSLF
Trigger: GAAAAGCGAAAATGCCAACAAACGGCCCGCATGTTC...CCCATCAAGGAGGAGTTCACGGAGGCCGAGATCCACTGAGGGCCTCGCCTGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000378280.5
ENST00000378285.5
CDS TCA 90 bp CATGCTGGAATCCGTTCCGCCCACCACCTCATTATTCCCCCGGCTTaGCTGGGGAAGGTCGAAGTAGGTGCTGTCTGGTTCCAGAGAGCT +
Preference number: 5 (lower is better)
Translates to: HAGIRSAHHLIIPPA*LGKVEVGAVWFQRA
Trigger: AGCTCTCTGGAACCAGACAGCACCTACTTCGACCTTCCCCAGTCAAGCCGGGGGAATAATGAGGTGGTGGGCGGAACGGATTCCAGCATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000346387.8
ENST00000354437.8
ENST00000357733.7
ENST00000378295.9
ENST00000603362.5
ENST00000604074.5
ENST00000604479.5
CDS TCA 90 bp CCCGTGCCTCTGTCCAGGACAGGATTTCAAACCAAAGATCCCACCTaGGCATGGGGAAGCCGCTGGCCAGTCTTGGCAGAGATCTCACCA +
Preference number: 5 (lower is better)
Translates to: PVPLSRTGFQTKDPT*AWGSRWPVLAEISP
Trigger: TGGTGAGATCTCTGCCAAGACTGGCCAGCGGCTTCCCCATGCTCAGGTGGGATCTTTGGTTTGAAATCCTGTCCTGGACAGAGGCACGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000604194.1
CDS GCA 90 bp GCTGTGGGCCTGTCTCGGACAGACAACTCTTGGCAGCAGAGCCCGTaGCTCTGTCCAGGACAGGATTTCAAACCAAAGATCCCACCTGAG +
Preference number: 5 (lower is better)
Translates to: AVGLSRTDNSWQQSP*LCPGQDFKPKIPPE
Trigger: CTCAGGTGGGATCTTTGGTTTGAAATCCTGTCCTGGACAGAGGCACGGGCTCTGCTGCCAAGAGTTGTCTGTCCGAGACAGGCCCACAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604194.1
CDS-3UTR CAA 90 bp GGAAGGACCTCGCCTGGTTGGGAGATGACAGTCTCTAGGATGAAGCCTGGAAGTGCAGACTGTCCTTCGTaGAAGTCCCTCCCGAGCTCG +
Preference number: 5 (lower is better)
Translates to: GRTSPGWEMTVSRMKPGSADCPS*KSLPSS
Trigger: CGAGCTCGGGAGGGACTTCAACGAAGGACAGTCTGC...ACTTCCAGGCTTCATCCTAGAGACTGTCATCTCCCAACCAGGCGAGGTCCTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CAA 90 bp TCAACAAGCCCTCTGGAACTGAAGCACATCTGCGCTGGGCTGAGGAACCCCGGGTACTGCGAGAGATTATaGCCTTCCACGCGGATGAGG +
Preference number: 5 (lower is better)
Translates to: STSPLELKHICAGLRNPGYCERL*PSTRMR
Trigger: CCTCATCCGCGTGGAAGGCAATAATCTCTCGCAGTA...CCCGGGGTTCCTCAGCCCAGCGCAGATGTGCTTCAGTTCCAGAGGGCTTGTTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CAA 90 bp TCAACAAGCCCTCTGGAACTGAAGCACATCTGCGCTGGGCTGAGGAACCCCGGGAGAGGATCCTTTCCTTaGGAAGGACCTCGCCTGGTT +
Preference number: 5 (lower is better)
Translates to: STSPLELKHICAGLRNPGRGSFP*EGPRLV
Trigger: AACCAGGCGAGGTCCTTCCAAAGGAAAGGATCCTCT...CCCGGGGTTCCTCAGCCCAGCGCAGATGTGCTTCAGTTCCAGAGGGCTTGTTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CAA 90 bp ACCTTGCCTTTCCCCGGGCACAGCCCGAAGGTCCTGCCTCCTGAGGCAGTTTTGCTCATGGGCGCTAGGTaGAACTCCAAAGAGAATGCT +
Preference number: 5 (lower is better)
Translates to: TLPFPGHSPKVLPPEAVLLMGAR*NSKENA
Trigger: AGCATTCTCTTTGGAGTTCAACCTAGCGCCCATGAG...CAAAACTGCCTCAGGAGGCAGGACCTTCGGGCTGTGCCCGGGGAAAGGCAAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CAA 90 bp GCCAGAGCTTCCTGCCCTTCAGCTGGAAGGAGCCGGAAGGAGCTGGAAGGAAGGAGCATTCCTGCAGATTaGCCTGGATTTGCCCTTCCT +
Preference number: 5 (lower is better)
Translates to: ARASCPSAGRSRKELEGRSIPAD*PGFALP
Trigger: AGGAAGGGCAAATCCAGGCAAATCTGCAGGAATGCT...CCTTCCTTCCAGCTCCTTCCGGCTCCTTCCAGCTGAAGGGCAGGAAGCTCTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CAA 90 bp ATGGCAATAAGATGGAGAGCTGAGGTGACATGCAGCTGGGGTGGCTGCGCCACCTCTGACCAGAGCGACTaGGACAGATGTGAGCTGACC +
Preference number: 5 (lower is better)
Translates to: MAIRWRAEVTCSWGGCATSDQSD*DRCELT
Trigger: GGTCAGCTCACATCTGTCCAAGTCGCTCTGGTCAGA...GGTGGCGCAGCCACCCCAGCTGCATGTCACCTCAGCTCTCCATCTTATTGCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CAA 90 bp GAGCAGCTGCTGCGCGGTGCTGTAGTCGTGGCCCTGCTTCAGGTCCTGCAGGCCCATTACCAAAAACAGTaGTTATGTCATTGGAGGGCG +
Preference number: 5 (lower is better)
Translates to: EQLLRGAVVVALLQVLQAHYQKQ*LCHWRA
Trigger: CGCCCTCCAATGACATAACAACTGTTTTTGGTAATG...GGCCTGCAGGACCTGAAGCAGGGCCACGACTACAGCACCGCGCAGCAGCTGCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000604074.5
CDS GCA 90 bp CTCCTTGGTGCATGCCAATTCCTGGAAATGACACTCCAGAGACAGTaGCAGCAAAGCCCAAATCCACCCACCCGCAGATGCGTCTCGCTG +
Preference number: 5 (lower is better)
Translates to: LLGACQFLEMTLQRQ*QQSPNPPTRRCVSL
Trigger: CAGCGAGACGCATCTGCGGGTGGGTGGATTTGGGCTTTGCTGGCACTGTCTCTGGAGTGTCATTTCCAGGAATTGGCATGCACCAAGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604194.1
CDS GCA 90 bp CTCAAAGCCCTGAGCATGGTGCCTGGCTCGAGGAGACTGGCCTTGTaGACAGGTGATGTTATCAGAATTAGCAAGATCCCCACCGTGGGC +
Preference number: 5 (lower is better)
Translates to: LKALSMVPGSRRLAL*TGDVIRISKIPTVG
Trigger: GCCCACGGTGGGGATCTTGCTAATTCTGATAACATCACCTGTGCACAAGGCCAGTCTCCTCGAGCCAGGCACCATGCTCAGGGCTTTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000604194.1
CDS CCA 90 bp TCATCCACATACTGCGAGAGATTATTGCCTTCCACGCGGATGAGGTaGCTGGCTGGAGCAGACTGTCCTTCGTTGAAGTCCCTCCCGAGC +
Preference number: 5 (lower is better)
Translates to: SSTYCERLLPSTRMR*LAGADCPSLKSLPS
Trigger: GCTCGGGAGGGACTTCAACGAAGGACAGTCTGCTCCAGCCAGCCACCTCATCCGCGTGGAAGGCAATAATCTCTCGCAGTATGTGGATGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000346387.8
ENST00000354437.8
ENST00000357733.7
ENST00000378280.5
ENST00000378285.5
ENST00000378288.8
ENST00000378290.4
ENST00000378295.9
ENST00000603362.5
ENST00000603364.5
ENST00000604074.5
ENST00000604479.5
CDS-3UTR CAA 90 bp CCTCACTGGACTCAGGGTGGACAGGTAACGTACCTAAGAAACAAATCAACAAGCCTGGCGGCCCCGTTCTaGGCGGAGCTCTCGTTCAGG +
Preference number: 5 (lower is better)
Translates to: PHWTQGGQVTYLRNKSTSLAAPF*AELSFR
Trigger: CCTGAACGAGAGCTCCGCCAAGAACGGGGCCGCCAG...GCTTGTTGATTTGTTTCTTAGGTACGTTACCTGTCCACCCTGAGTCCAGTGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CAA 90 bp CACACTACAGGGGCTCTTGGGACAGCCTCACTGGACTCAGGGTGGACAGGTAACAGAGGATCCTTTCCTTaGGAAGGACCTCGCCTGGTT +
Preference number: 5 (lower is better)
Translates to: HTTGALGTASLDSGWTGNRGSFP*EGPRLV
Trigger: AACCAGGCGAGGTCCTTCCAAAGGAAAGGATCCTCT...GTTACCTGTCCACCCTGAGTCCAGTGAGGCTGTCCCAAGAGCCCCTGTAGTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CAA 90 bp CTACAGGGGCTCTTGGGACAGCCTCACTGGACTCAGGGTGGACAGGTAACGTACAGAGGATCCTTTCCTTaGGAAGGACCTCGCCTGGTT +
Preference number: 5 (lower is better)
Translates to: LQGLLGQPHWTQGGQVTYRGSFP*EGPRLV
Trigger: AACCAGGCGAGGTCCTTCCAAAGGAAAGGATCCTCT...GTACGTTACCTGTCCACCCTGAGTCCAGTGAGGCTGTCCCAAGAGCCCCTGTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CAA 90 bp GGGTGTCAGGATGGGCCCCCGCGGCTCCTGAAGTGGAACATGGGGGAAGAGTGGGTCGCAAAATACTTTTaGGCAGTCCATCAGCAAAGA +
Preference number: 5 (lower is better)
Translates to: GCQDGPPRLLKWNMGEEWVAKYF*AVHQQR
Trigger: TCTTTGCTGATGGACTGCCAAAAAGTATTTTGCGAC...CCACTCTTCCCCCATGTTCCACTTCAGGAGCCGCGGGGGCCCATCCTGACACCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CAA 90 bp CAGAGCGACTTGGACAGATGTGAGCTGACCTGCCTGGCGAGCTCCTTCTGCCTTTCAGCAACACTGTGGTaGTTGTTAGGGGCAGGAAGG +
Preference number: 5 (lower is better)
Translates to: QSDLDRCELTCLASSFCLSATLW*LLGAGR
Trigger: CCTTCCTGCCCCTAACAACAACCACAGTGTTGCTGA...AAGGCAGAAGGAGCTCGCCAGGCAGGTCAGCTCACATCTGTCCAAGTCGCTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CAA 90 bp CCTCACTGGACTCAGGGTGGACAGGTAACGTACCTAAGAAACAAATCAACAAGCCCCACGGGCCCCAGGTaGGGTGTAGCTGCCGAACTG +
Preference number: 5 (lower is better)
Translates to: PHWTQGGQVTYLRNKSTSPTGPR*GVAAEL
Trigger: CAGTTCGGCAGCTACACCCAACCTGGGGCCCGTGGG...GCTTGTTGATTTGTTTCTTAGGTACGTTACCTGTCCACCCTGAGTCCAGTGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378288.8
ENST00000378295.9
CDS-3UTR CAA 90 bp GCATTCCTGCAGATTTGCCTGGATTTGCCCTTCCTGGGGTTCCCTCTAGGCTTCCATTATTCCCCCGGCTaGACTGGGGAAGGTCGAAGT +
Preference number: 5 (lower is better)
Translates to: AFLQICLDLPFLGFPLGFHYSPG*TGEGRS
Trigger: ACTTCGACCTTCCCCAGTCAAGCCGGGGGAATAATG...GAAGCCTAGAGGGAACCCCAGGAAGGGCAAATCCAGGCAAATCTGCAGGAATGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CAA 90 bp GAAGGTGGCCGTGGCAAGGGAGGAGCTGCTCCCATGGCAGAGCATTCCTGCAGAAATACTCGATGCAGTTaGGACACCCCAATCCTGTTA +
Preference number: 5 (lower is better)
Translates to: EGGRGKGGAAPMAEHSCRNTRCS*DTPILL
Trigger: TAACAGGATTGGGGTGTCCAAACTGCATCGAGTATT...TCTGCAGGAATGCTCTGCCATGGGAGCAGCTCCTCCCTTGCCACGGCCACCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346387.8
ENST00000378288.8
ENST00000378295.9
CDS-3UTR CAA 90 bp TCAACAAGCCCTCTGGAACTGAAGCACATCTGCGCTGGGCTGAGGAACCCCGGGTTCAGACACAGTCACTaGGCTGCTCACTACTATCCA +
Preference number: 5 (lower is better)
Translates to: STSPLELKHICAGLRNPGFRHSH*AAHYYP
Trigger: TGGATAGTAGTGAGCAGCCAAGTGACTGTGTCTGAA...CCCGGGGTTCCTCAGCCCAGCGCAGATGTGCTTCAGTTCCAGAGGGCTTGTTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CAA 90 bp CAGAGCGACTTGGACAGATGTGAGCTGACCTGCCTGGCGAGCTCCTTCTGCCTTCTCATGGGCGCTAGGTaGAACTCCAAAGAGAATGCT +
Preference number: 5 (lower is better)
Translates to: QSDLDRCELTCLASSFCLLMGAR*NSKENA
Trigger: AGCATTCTCTTTGGAGTTCAACCTAGCGCCCATGAG...AAGGCAGAAGGAGCTCGCCAGGCAGGTCAGCTCACATCTGTCCAAGTCGCTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CAA 90 bp GGAAGGACCTCGCCTGGTTGGGAGATGACAGTCTCTAGGATGAAGCCTGGAAGTCAGATTTGCCTGGATTaGCCCTTCCTGGGGTTCCCT +
Preference number: 5 (lower is better)
Translates to: GRTSPGWEMTVSRMKPGSQICLD*PFLGFP
Trigger: AGGGAACCCCAGGAAGGGCAAATCCAGGCAAATCTG...ACTTCCAGGCTTCATCCTAGAGACTGTCATCTCCCAACCAGGCGAGGTCCTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CAA 90 bp ATGGCAATAAGATGGAGAGCTGAGGTGACATGCAGCTGGGGTGGCTGCGCCACCAGCATTCCTGCAGATTaGCCTGGATTTGCCCTTCCT +
Preference number: 5 (lower is better)
Translates to: MAIRWRAEVTCSWGGCATSIPAD*PGFALP
Trigger: AGGAAGGGCAAATCCAGGCAAATCTGCAGGAATGCT...GGTGGCGCAGCCACCCCAGCTGCATGTCACCTCAGCTCTCCATCTTATTGCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CAA 90 bp CTGCTTGCGGGCCTTGCAGTCGGGCAGGTCGAAGCCGAAGTCCGCCCACTCGTCTCACTTAAAGGATTCTaGTTCCTGGGAATTTGCATT +
Preference number: 5 (lower is better)
Translates to: LLAGLAVGQVEAEVRPLVSLKGF*FLGICI
Trigger: AATGCAAATTCCCAGGAACAAGAATCCTTTAAGTGA...GACGAGTGGGCGGACTTCGGCTTCGACCTGCCCGACTGCAAGGCCCGCAAGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604074.5
CDS-3UTR CAA 90 bp CTACAGGGGCTCTTGGGACAGCCTCACTGGACTCAGGGTGGACAGGTAACGTACGTGGATGTTTGTGCGTaGGAGACACTGACTGTTCTG +
Preference number: 5 (lower is better)
Translates to: LQGLLGQPHWTQGGQVTYVDVCA*ETLTVL
Trigger: CAGAACAGTCAGTGTCTCCAACGCACAAACATCCAC...GTACGTTACCTGTCCACCCTGAGTCCAGTGAGGCTGTCCCAAGAGCCCCTGTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CAA 90 bp CCCCAAGAGATGGGTGTGGTGCCTGGGGCATGGGTCTTAGCCTTTCTGGTCTCAGTGGATGTTTGTGCGTaGGAGACACTGACTGTTCTG +
Preference number: 5 (lower is better)
Translates to: PQEMGVVPGAWVLAFLVSVDVCA*ETLTVL
Trigger: CAGAACAGTCAGTGTCTCCAACGCACAAACATCCAC...TGAGACCAGAAAGGCTAAGACCCATGCCCCAGGCACCACACCCATCTCTTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CAA 90 bp TTTCACAGCTGCTTCTCCAGTGCAAGGAGGCTGCATGGGCTCCCTAGACAGGTGCAGAGGAGTGGATGTTaGTGCGTTGGAGACACTGAC +
Preference number: 5 (lower is better)
Translates to: FHSCFSSARRLHGLPRQVQRSGC*CVGDTD
Trigger: GTCAGTGTCTCCAACGCACAAACATCCACTCCTCTG...CACCTGTCTAGGGAGCCCATGCAGCCTCCTTGCACTGGAGAAGCAGCTGTGAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CAA 90 bp CCTCACTGGACTCAGGGTGGACAGGTAACGTACCTAAGAAACAAATCAACAAGCACTGCGTGGCCATGGTaGTTGAGCATCCCGGGGCCC +
Preference number: 5 (lower is better)
Translates to: PHWTQGGQVTYLRNKSTSTAWPW*LSIPGP
Trigger: GGGCCCCGGGATGCTCAACAACCATGGCCACGCAGT...GCTTGTTGATTTGTTTCTTAGGTACGTTACCTGTCCACCCTGAGTCCAGTGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378288.8
ENST00000378295.9
CDS-3UTR CAA 90 bp CACACTACAGGGGCTCTTGGGACAGCCTCACTGGACTCAGGGTGGACAGGTAACGAACATGCGGGCCGTTaGTTGGCATTTTCGCTTTTC +
Preference number: 5 (lower is better)
Translates to: HTTGALGTASLDSGWTGNEHAGR*LAFSLF
Trigger: GAAAAGCGAAAATGCCAACAAACGGCCCGCATGTTC...GTTACCTGTCCACCCTGAGTCCAGTGAGGCTGTCCCAAGAGCCCCTGTAGTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000378288.8
CDS CCA 90 bp AGCAGATTGAACTGGGCCATGACAGATGTAGTCATGCCCTCCAGGTaGAAGACGTCCATGCTGGAATCCGTTCCGCCCACCACCTCATTA +
Preference number: 5 (lower is better)
Translates to: SRLNWAMTDVVMPSR*KTSMLESVPPTTSL
Trigger: TAATGAGGTGGTGGGCGGAACGGATTCCAGCATGGACGTCTTCCACCTGGAGGGCATGACTACATCTGTCATGGCCCAGTTCAATCTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000346387.8
ENST00000354437.8
ENST00000357733.7
ENST00000378295.9
ENST00000603362.5
ENST00000604074.5
ENST00000604479.5
CDS-3UTR CAA 90 bp TCCATTAATACTGCTCGGAGAAGCACGATCTTACACGAAAAACACGGATGGGATCTGGCGGCCCCGTTCTaGGCGGAGCTCTCGTTCAGG +
Preference number: 5 (lower is better)
Translates to: SINTARRSTILHEKHGWDLAAPF*AELSFR
Trigger: CCTGAACGAGAGCTCCGCCAAGAACGGGGCCGCCAG...ATCCCATCCGTGTTTTTCGTGTAAGATCGTGCTTCTCCGAGCAGTATTAATGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CAA 90 bp TTGCATTTTCTCCTGACCACGGCGAAGTCTCAACTCTGTCTACTTTCACAGCTGTCCGTGAACTCCTCCTaGATGGGCTGCTTGCGGGCC +
Preference number: 5 (lower is better)
Translates to: LHFLLTTAKSQLCLLSQLSVNSS*MGCLRA
Trigger: GGCCCGCAAGCAGCCCATCAAGGAGGAGTTCACGGA...CAGCTGTGAAAGTAGACAGAGTTGAGACTTCGCCGTGGTCAGGAGAAAATGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CAA 90 bp CCTCACTGGACTCAGGGTGGACAGGTAACGTACCTAAGAAACAAATCAACAAGCTCCGTGAACTCCTCCTaGATGGGCTGCTTGCGGGCC +
Preference number: 5 (lower is better)
Translates to: PHWTQGGQVTYLRNKSTSSVNSS*MGCLRA
Trigger: GGCCCGCAAGCAGCCCATCAAGGAGGAGTTCACGGA...GCTTGTTGATTTGTTTCTTAGGTACGTTACCTGTCCACCCTGAGTCCAGTGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CAA 90 bp ACCTTGCCTTTCCCCGGGCACAGCCCGAAGGTCCTGCCTCCTGAGGCAGTTTTGGTCGCAAAATACTTTTaGGCAGTCCATCAGCAAAGA +
Preference number: 5 (lower is better)
Translates to: TLPFPGHSPKVLPPEAVLVAKYF*AVHQQR
Trigger: TCTTTGCTGATGGACTGCCAAAAAGTATTTTGCGAC...CAAAACTGCCTCAGGAGGCAGGACCTTCGGGCTGTGCCCGGGGAAAGGCAAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CAA 90 bp CAGAGCGACTTGGACAGATGTGAGCTGACCTGCCTGGCGAGCTCCTTCTGCCTTTTCAGACACAGTCACTaGGCTGCTCACTACTATCCA +
Preference number: 5 (lower is better)
Translates to: QSDLDRCELTCLASSFCLFRHSH*AAHYYP
Trigger: TGGATAGTAGTGAGCAGCCAAGTGACTGTGTCTGAA...AAGGCAGAAGGAGCTCGCCAGGCAGGTCAGCTCACATCTGTCCAAGTCGCTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CAA 90 bp CTACAGGGGCTCTTGGGACAGCCTCACTGGACTCAGGGTGGACAGGTAACGTACTTCAGACACAGTCACTaGGCTGCTCACTACTATCCA +
Preference number: 5 (lower is better)
Translates to: LQGLLGQPHWTQGGQVTYFRHSH*AAHYYP
Trigger: TGGATAGTAGTGAGCAGCCAAGTGACTGTGTCTGAA...GTACGTTACCTGTCCACCCTGAGTCCAGTGAGGCTGTCCCAAGAGCCCCTGTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CAA 90 bp GTCGCAAAATACTTTTTGGCAGTCCATCAGCAAAGAGGATCCTTTCCTTTGGAACTCCCGAGCTCGTGGTaGGGGCAGCGTTTCACGACG +
Preference number: 5 (lower is better)
Translates to: VAKYFLAVHQQRGSFPLELPSSW*GQRFTT
Trigger: CGTCGTGAAACGCTGCCCCAACCACGAGCTCGGGAG...TTCCAAAGGAAAGGATCCTCTTTGCTGATGGACTGCCAAAAAGTATTTTGCGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CAA 90 bp TCCATTAATACTGCTCGGAGAAGCACGATCTTACACGAAAAACACGGATGGGATTCCGTGAACTCCTCCTaGATGGGCTGCTTGCGGGCC +
Preference number: 5 (lower is better)
Translates to: SINTARRSTILHEKHGWDSVNSS*MGCLRA
Trigger: GGCCCGCAAGCAGCCCATCAAGGAGGAGTTCACGGA...ATCCCATCCGTGTTTTTCGTGTAAGATCGTGCTTCTCCGAGCAGTATTAATGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CAA 90 bp TTGCATTTTCTCCTGACCACGGCGAAGTCTCAACTCTGTCTACTTTCACAGCTGACACTACAGGGGCTCTaGGGACAGCCTCACTGGACT +
Preference number: 5 (lower is better)
Translates to: LHFLLTTAKSQLCLLSQLTLQGL*GQPHWT
Trigger: AGTCCAGTGAGGCTGTCCCAAGAGCCCCTGTAGTGT...CAGCTGTGAAAGTAGACAGAGTTGAGACTTCGCCGTGGTCAGGAGAAAATGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CAA 90 bp GCCAGAGCTTCCTGCCCTTCAGCTGGAAGGAGCCGGAAGGAGCTGGAAGGAAGGTCACTTAAAGGATTCTaGTTCCTGGGAATTTGCATT +
Preference number: 5 (lower is better)
Translates to: ARASCPSAGRSRKELEGRSLKGF*FLGICI
Trigger: AATGCAAATTCCCAGGAACAAGAATCCTTTAAGTGA...CCTTCCTTCCAGCTCCTTCCGGCTCCTTCCAGCTGAAGGGCAGGAAGCTCTGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CAA 90 bp GTCGCAAAATACTTTTTGGCAGTCCATCAGCAAAGAGGATCCTTTCCTTTGGAATGCTTGAAGGCACGCTaGCTGGCGGCCCCGTTCTTG +
Preference number: 5 (lower is better)
Translates to: VAKYFLAVHQQRGSFPLECLKAR*LAAPFL
Trigger: CAAGAACGGGGCCGCCAGCAAGCGTGCCTTCAAGCA...TTCCAAAGGAAAGGATCCTCTTTGCTGATGGACTGCCAAAAAGTATTTTGCGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CAA 90 bp TCAACAAGCCCTCTGGAACTGAAGCACATCTGCGCTGGGCTGAGGAACCCCGGGTCACTTAAAGGATTCTaGTTCCTGGGAATTTGCATT +
Preference number: 5 (lower is better)
Translates to: STSPLELKHICAGLRNPGSLKGF*FLGICI
Trigger: AATGCAAATTCCCAGGAACAAGAATCCTTTAAGTGA...CCCGGGGTTCCTCAGCCCAGCGCAGATGTGCTTCAGTTCCAGAGGGCTTGTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CAA 90 bp TTGCATTTTCTCCTGACCACGGCGAAGTCTCAACTCTGTCTACTTTCACAGCTGGTGCTGCTCAGCAGATaGAACTGGGCCATGACAGAT +
Preference number: 5 (lower is better)
Translates to: LHFLLTTAKSQLCLLSQLVLLSR*NWAMTD
Trigger: ATCTGTCATGGCCCAGTTCAATCTGCTGAGCAGCAC...CAGCTGTGAAAGTAGACAGAGTTGAGACTTCGCCGTGGTCAGGAGAAAATGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CAA 90 bp CCTCACTGGACTCAGGGTGGACAGGTAACGTACCTAAGAAACAAATCAACAAGCTACTGCGAGAGATTATaGCCTTCCACGCGGATGAGG +
Preference number: 5 (lower is better)
Translates to: PHWTQGGQVTYLRNKSTSYCERL*PSTRMR
Trigger: CCTCATCCGCGTGGAAGGCAATAATCTCTCGCAGTA...GCTTGTTGATTTGTTTCTTAGGTACGTTACCTGTCCACCCTGAGTCCAGTGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CAA 90 bp TTGCATTTTCTCCTGACCACGGCGAAGTCTCAACTCTGTCTACTTTCACAGCTGTACTGCGAGAGATTATaGCCTTCCACGCGGATGAGG +
Preference number: 5 (lower is better)
Translates to: LHFLLTTAKSQLCLLSQLYCERL*PSTRMR
Trigger: CCTCATCCGCGTGGAAGGCAATAATCTCTCGCAGTA...CAGCTGTGAAAGTAGACAGAGTTGAGACTTCGCCGTGGTCAGGAGAAAATGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CAA 90 bp GATCTTACACGAAAAACACGGATGGGATTTCGTTTTCACCTTAAAGCATTAAAGGGCTGCTTGCGGGCCTaGCAGTCGGGCAGGTCGAAG +
Preference number: 5 (lower is better)
Translates to: DLTRKTRMGFRFHLKALKGCLRA*QSGRSK
Trigger: CTTCGACCTGCCCGACTGCAAGGCCCGCAAGCAGCC...CTTTAATGCTTTAAGGTGAAAACGAAATCCCATCCGTGTTTTTCGTGTAAGATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CAA 90 bp GCATTCCTGCAGATTTGCCTGGATTTGCCCTTCCTGGGGTTCCCTCTAGGCTTCGTCGCAAAATACTTTTaGGCAGTCCATCAGCAAAGA +
Preference number: 5 (lower is better)
Translates to: AFLQICLDLPFLGFPLGFVAKYF*AVHQQR
Trigger: TCTTTGCTGATGGACTGCCAAAAAGTATTTTGCGAC...GAAGCCTAGAGGGAACCCCAGGAAGGGCAAATCCAGGCAAATCTGCAGGAATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CAA 90 bp GGAAGGACCTCGCCTGGTTGGGAGATGACAGTCTCTAGGATGAAGCCTGGAAGTGTCGCAAAATACTTTTaGGCAGTCCATCAGCAAAGA +
Preference number: 5 (lower is better)
Translates to: GRTSPGWEMTVSRMKPGSVAKYF*AVHQQR
Trigger: TCTTTGCTGATGGACTGCCAAAAAGTATTTTGCGAC...ACTTCCAGGCTTCATCCTAGAGACTGTCATCTCCCAACCAGGCGAGGTCCTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CAA 90 bp CCCCAAGAGATGGGTGTGGTGCCTGGGGCATGGGTCTTAGCCTTTCTGGTCTCATCACTTAAAGGATTCTaGTTCCTGGGAATTTGCATT +
Preference number: 5 (lower is better)
Translates to: PQEMGVVPGAWVLAFLVSSLKGF*FLGICI
Trigger: AATGCAAATTCCCAGGAACAAGAATCCTTTAAGTGA...TGAGACCAGAAAGGCTAAGACCCATGCCCCAGGCACCACACCCATCTCTTGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CAA 90 bp CCTCACTGGACTCAGGGTGGACAGGTAACGTACCTAAGAAACAAATCAACAAGCCAGAGGAGTGGATGTTaGTGCGTTGGAGACACTGAC +
Preference number: 5 (lower is better)
Translates to: PHWTQGGQVTYLRNKSTSQRSGC*CVGDTD
Trigger: GTCAGTGTCTCCAACGCACAAACATCCACTCCTCTG...GCTTGTTGATTTGTTTCTTAGGTACGTTACCTGTCCACCCTGAGTCCAGTGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CAA 90 bp TTGCATTTTCTCCTGACCACGGCGAAGTCTCAACTCTGTCTACTTTCACAGCTGCAGAGGAGTGGATGTTaGTGCGTTGGAGACACTGAC +
Preference number: 5 (lower is better)
Translates to: LHFLLTTAKSQLCLLSQLQRSGC*CVGDTD
Trigger: GTCAGTGTCTCCAACGCACAAACATCCACTCCTCTG...CAGCTGTGAAAGTAGACAGAGTTGAGACTTCGCCGTGGTCAGGAGAAAATGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CAA 90 bp GGAAGGACCTCGCCTGGTTGGGAGATGACAGTCTCTAGGATGAAGCCTGGAAGTCATTACCAAAAACAGTaGTTATGTCATTGGAGGGCG +
Preference number: 5 (lower is better)
Translates to: GRTSPGWEMTVSRMKPGSHYQKQ*LCHWRA
Trigger: CGCCCTCCAATGACATAACAACTGTTTTTGGTAATG...ACTTCCAGGCTTCATCCTAGAGACTGTCATCTCCCAACCAGGCGAGGTCCTTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CAA 90 bp AAAGATGTCGCAAAATACTTTTTGGCAGTCCATCAGCAAAGAGGATCCTTTCCTGCAGACTGTCCTTCGTaGAAGTCCCTCCCGAGCTCG +
Preference number: 5 (lower is better)
Translates to: KDVAKYFLAVHQQRGSFPADCPS*KSLPSS
Trigger: CGAGCTCGGGAGGGACTTCAACGAAGGACAGTCTGC...AGGAAAGGATCCTCTTTGCTGATGGACTGCCAAAAAGTATTTTGCGACATCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CAA 90 bp TCCATTAATACTGCTCGGAGAAGCACGATCTTACACGAAAAACACGGATGGGATCCTCCTGAGGCAGTTTaGGACACACAGGAAGGAGAG +
Preference number: 5 (lower is better)
Translates to: SINTARRSTILHEKHGWDPPEAV*DTQEGE
Trigger: CTCTCCTTCCTGTGTGTCCAAAACTGCCTCAGGAGG...ATCCCATCCGTGTTTTTCGTGTAAGATCGTGCTTCTCCGAGCAGTATTAATGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CAA 90 bp TGTTTCAGACACAGTCACTTGGCTGCTCACTACTATCCAGAACCAAAAGATGTCTCAGCAACACTGTGGTaGTTGTTAGGGGCAGGAAGG +
Preference number: 5 (lower is better)
Translates to: CFRHSHLAAHYYPEPKDVSATLW*LLGAGR
Trigger: CCTTCCTGCCCCTAACAACAACCACAGTGTTGCTGA...GACATCTTTTGGTTCTGGATAGTAGTGAGCAGCCAAGTGACTGTGTCTGAAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CAA 90 bp GTCGCAAAATACTTTTTGGCAGTCCATCAGCAAAGAGGATCCTTTCCTTTGGAATCTGACCAGAGCGACTaGGACAGATGTGAGCTGACC +
Preference number: 5 (lower is better)
Translates to: VAKYFLAVHQQRGSFPLESDQSD*DRCELT
Trigger: GGTCAGCTCACATCTGTCCAAGTCGCTCTGGTCAGA...TTCCAAAGGAAAGGATCCTCTTTGCTGATGGACTGCCAAAAAGTATTTTGCGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CAA 90 bp GATCTTACACGAAAAACACGGATGGGATTTCGTTTTCACCTTAAAGCATTAAAGGGGCTGTGTCTAACCTaGCTGTGCCCTGAGGGGCTT +
Preference number: 5 (lower is better)
Translates to: DLTRKTRMGFRFHLKALKGLCLT*LCPEGL
Trigger: AAGCCCCTCAGGGCACAGCAAGGTTAGACACAGCCC...CTTTAATGCTTTAAGGTGAAAACGAAATCCCATCCGTGTTTTTCGTGTAAGATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CAA 90 bp TTGCATTTTCTCCTGACCACGGCGAAGTCTCAACTCTGTCTACTTTCACAGCTGCATTACCAAAAACAGTaGTTATGTCATTGGAGGGCG +
Preference number: 5 (lower is better)
Translates to: LHFLLTTAKSQLCLLSQLHYQKQ*LCHWRA
Trigger: CGCCCTCCAATGACATAACAACTGTTTTTGGTAATG...CAGCTGTGAAAGTAGACAGAGTTGAGACTTCGCCGTGGTCAGGAGAAAATGCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CAA 90 bp AAAGATGTCGCAAAATACTTTTTGGCAGTCCATCAGCAAAGAGGATCCTTTCCTGTGGATGTTTGTGCGTaGGAGACACTGACTGTTCTG +
Preference number: 5 (lower is better)
Translates to: KDVAKYFLAVHQQRGSFPVDVCA*ETLTVL
Trigger: CAGAACAGTCAGTGTCTCCAACGCACAAACATCCAC...AGGAAAGGATCCTCTTTGCTGATGGACTGCCAAAAAGTATTTTGCGACATCTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS-3UTR CAA 90 bp GATCTTACACGAAAAACACGGATGGGATTTCGTTTTCACCTTAAAGCATTAAAGTTCAGACACAGTCACTaGGCTGCTCACTACTATCCA +
Preference number: 5 (lower is better)
Translates to: DLTRKTRMGFRFHLKALKFRHSH*AAHYYP
Trigger: TGGATAGTAGTGAGCAGCCAAGTGACTGTGTCTGAA...CTTTAATGCTTTAAGGTGAAAACGAAATCCCATCCGTGTTTTTCGTGTAAGATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346387.8
ENST00000357733.7
ENST00000378288.8
ENST00000378295.9
ENST00000604074.5
CDS CCA 72 bp GTAGGGCGAGTGGGTGGGCACGCTGGCGGCGTGCTCTaGGGTGTAGGGGCTGGCCGAGGCCGCGCGGCTGCT +
Preference number: 6 (lower is better)
Translates to: VGRVGGHAGGVL*GVGAGRGRAAA
Trigger: AGCAGCCGCGCGGCCTCGGCCAGCCCCTACACCCCAGAGCACGCCGCCAGCGTGCCCACCCACTCGCCCTAC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000346387.8
ENST00000354437.8
ENST00000357733.7
ENST00000378280.5
ENST00000378285.5
ENST00000378288.8
ENST00000378290.4
ENST00000378295.9
ENST00000603362.5
ENST00000603364.5
ENST00000604074.5
ENST00000604194.1
ENST00000604479.5
CDS CCA 72 bp TGGATCTGGGCGGCCCGAGGGGAAGGGTCACGGTCGTaGCCGCCCGGCAGCGTGGACCGAGCGGGAGAGGCT +
Preference number: 6 (lower is better)
Translates to: WIWAARGEGSRS*PPGSVDRAGEA
Trigger: AGCCTCTCCCGCTCGGTCCACGCTGCCGGGCGGCCACGACCGTGACCCTTCCCCTCGGGCCGCCCAGATCCA
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378280.5
ENST00000378285.5
ENST00000378288.8
ENST00000603364.5
CDS GCA 72 bp GCACACCCAGACTGCCCGGCCCTGAGACCCGCCTCCTaGCCGATGCTCCTCCTGGCCCGGGCCAGGTGGGAA +
Preference number: 6 (lower is better)
Translates to: AHPDCPALRPAS*PMLLLARARWE
Trigger: TTCCCACCTGGCCCGGGCCAGGAGGAGCATCGGGCAGGAGGCGGGTCTCAGGGCCGGGCAGTCTGGGTGTGC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604194.1
CDS CCA 72 bp TGGGCACGCTGGCGGCGTGCTCTGGGGTGTAGGGGCTaGCCGAGGCCGCGCGGCTGCTCATCTGGTCCATGG +
Preference number: 6 (lower is better)
Translates to: WARWRRALGCRG*PRPRGCSSGPW
Trigger: CCATGGACCAGATGAGCAGCCGCGCGGCCTCGGCCAGCCCCTACACCCCAGAGCACGCCGCCAGCGTGCCCA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000346387.8
ENST00000354437.8
ENST00000357733.7
ENST00000378280.5
ENST00000378285.5
ENST00000378288.8
ENST00000378290.4
ENST00000378295.9
ENST00000603362.5
ENST00000603364.5
ENST00000604074.5
ENST00000604194.1
ENST00000604479.5
CDS CCA 72 bp GCCTCCTGCCCGATGCTCCTCCTGGCCCGGGCCAGGTaGGAACCCCGAGCAGACAGTGGGGCGAGCTCAGAC +
Preference number: 6 (lower is better)
Translates to: ASCPMLLLARAR*EPRADSGASSD
Trigger: GTCTGAGCTCGCCCCACTGTCTGCTCGGGGTTCCCACCTGGCCCGGGCCAGGAGGAGCATCGGGCAGGAGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000604194.1
CDS GCA 72 bp GGCCACTCACGTCTAGAGGGGTGGGCACACCCAGACTaGCCGGCCCTGAGACCCGCCTCCTGCCCGATGCTC +
Preference number: 6 (lower is better)
Translates to: GHSRLEGWAHPD*PALRPASCPML
Trigger: GAGCATCGGGCAGGAGGCGGGTCTCAGGGCCGGGCAGTCTGGGTGTGCCCACCCCTCTAGACGTGAGTGGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000604194.1
CDS CCA 72 bp CAGGGAACTGGTGTCCCGTGGGACGAGGCATGGATCTaGGCGGCCCGAGGGGAAGGGTCACGGTCGTGGCCG +
Preference number: 6 (lower is better)
Translates to: QGTGVPWDEAWI*AARGEGSRSWP
Trigger: CGGCCACGACCGTGACCCTTCCCCTCGGGCCGCCCAGATCCATGCCTCGTCCCACGGGACACCAGTTCCCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378280.5
ENST00000378285.5
ENST00000378288.8
ENST00000603364.5
CDS CCA 72 bp CCTGGCCCGGGCCAGGTGGGAACCCCGAGCAGACAGTaGGGCGAGCTCAGACCTCTTGAGGTGCGGGGAACG +
Preference number: 6 (lower is better)
Translates to: PGPGQVGTPSRQ*GELRPLEVRGT
Trigger: CGTTCCCCGCACCTCAAGAGGTCTGAGCTCGCCCCACTGTCTGCTCGGGGTTCCCACCTGGCCCGGGCCAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000604194.1
CDS TCA 72 bp CCACCGTGGGCCAGTCTGTCTCCAGGGGCACCGCAGTaGGGACCTGAGCCCTTGGCACGGTGGTTCCACCCC +
Preference number: 6 (lower is better)
Translates to: PPWASLSPGAPQ*GPEPLARWFHP
Trigger: GGGGTGGAACCACCGTGCCAAGGGCTCAGGTCCTCACTGCGGTGCCCCTGGAGACAGACTGGCCCACGGTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000604194.1
CDS TCA 72 bp CTTCCCCACCCACCTCGGACCCTGCAGGACCGGCCTTaGGAGCCCTCGGTCACCACAGAGCACCCAGTGCCG +
Preference number: 6 (lower is better)
Translates to: LPHPPRTLQDRP*EPSVTTEHPVP
Trigger: CGGCACTGGGTGCTCTGTGGTGACCGAGGGCTCTCAAGGCCGGTCCTGCAGGGTCCGAGGTGGGTGGGGAAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000604566.1
CDS GCA 72 bp CATCAGCTTTTCGGTCGCGGCCAGGACAGGCGCAGATaGGGCCCTCAAAGGACCGGCGGCCCAGCACCTGCC +
Preference number: 6 (lower is better)
Translates to: HQLFGRGQDRRR*GPQRTGGPAPA
Trigger: GGCAGGTGCTGGGCCGCCGGTCCTTTGAGGGCCGCATCTGCGCCTGTCCTGGCCGCGACCGAAAAGCTGATG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000346387.8
ENST00000354437.8
ENST00000357733.7
ENST00000378280.5
ENST00000378285.5
ENST00000378288.8
ENST00000378290.4
ENST00000378295.9
ENST00000603362.5
ENST00000603364.5
ENST00000604074.5
ENST00000604479.5
ENST00000604566.1
CDS CCA 72 bp CTGCTCATCTCGCCGTTGGCTGGCACTGCGTGGCCATaGTTGTTGAGCATCCCGGGGCCCACGGGCCCCAGG +
Preference number: 6 (lower is better)
Translates to: LLISPLAGTAWP*LLSIPGPTGPR
Trigger: CCTGGGGCCCGTGGGCCCCGGGATGCTCAACAACCATGGCCACGCAGTGCCAGCCAACGGCGAGATGAGCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354437.8
ENST00000378285.5
ENST00000378288.8
ENST00000378290.4
ENST00000378295.9
CDS CCA 72 bp ACACGCCAGGGAACTGGTGTCCCGTGGGACGAGGCATaGATCTGGGCGGCCCGAGGGGAAGGGTCACGGTCG +
Preference number: 6 (lower is better)
Translates to: TRQGTGVPWDEA*IWAARGEGSRS
Trigger: CGACCGTGACCCTTCCCCTCGGGCCGCCCAGATCCATGCCTCGTCCCACGGGACACCAGTTCCCTGGCGTGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378280.5
ENST00000378285.5
ENST00000378288.8
ENST00000603364.5
CDS CAA 72 bp GCCGAACTGTGCGGGGGAGGCTGGCCCACCAGCTGGTaGACGGAGGGCAGCTTGTTCATGCCCCCGTGCACC +
Preference number: 6 (lower is better)
Translates to: AELCGGGWPTSW*TEGSLFMPPCT
Trigger: GGTGCACGGGGGCATGAACAAGCTGCCCTCCGTCAACCAGCTGGTGGGCCAGCCTCCCCCGCACAGTTCGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000354437.8
ENST00000378285.5
ENST00000378288.8
ENST00000378290.4
ENST00000378295.9
CDS CAA 90 bp CTGTGCGGGGGAGGCTGGCCCACCAGCTGGTTGACGGAGGGCAGCTaGTTCATGCCCCCGTGCACCTTGTTCATGGGCGAGAGGACCGGC +
Preference number: 6 (lower is better)
Translates to: LCGGGWPTSWLTEGS*FMPPCTLFMGERTG
Trigger: GCCGGTCCTCTCGCCCATGAACAAGGTGCACGGGGGCATGAACAAGCTGCCCTCCGTCAACCAGCTGGTGGGCCAGCCTCCCCCGCACAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000354437.8
ENST00000378285.5
ENST00000378288.8
ENST00000378290.4
ENST00000378295.9
CDS CAA 90 bp CCCGAGACCATGGACTGGGCGCTGTGGCTGCTGCTCATCTCGCCGTaGGCTGGCACTGCGTGGCCATGGTTGTTGAGCATCCCGGGGCCC +
Preference number: 6 (lower is better)
Translates to: PETMDWALWLLLISP*AGTAWPWLLSIPGP
Trigger: GGGCCCCGGGATGCTCAACAACCATGGCCACGCAGTGCCAGCCAACGGCGAGATGAGCAGCAGCCACAGCGCCCAGTCCATGGTCTCGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354437.8
ENST00000378285.5
ENST00000378288.8
ENST00000378290.4
ENST00000378295.9
CDS CAA 90 bp CCCGAGACCATGGACTGGGCGCTGTGGCTGCTGCTCATCTCGCCGTaGGCTGGCACTGCGTGGCCATGGTTGTTGAGCATCCCGGGGCGG +
Preference number: 6 (lower is better)
Translates to: PETMDWALWLLLISP*AGTAWPWLLSIPGR
Trigger: CCGCCCCGGGATGCTCAACAACCATGGCCACGCAGTGCCAGCCAACGGCGAGATGAGCAGCAGCCACAGCGCCCAGTCCATGGTCTCGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357733.7
ENST00000378280.5
ENST00000603362.5
ENST00000604566.1
CDS TCA 72 bp CCGAACTGTGCGGGGGAGGCTGGCCCACCAGCTGGTTaGCGGAGGGCAGCTTGTTCATGCCCCCGTGCACCT +
Preference number: 6 (lower is better)
Translates to: PNCAGEAGPPAG*RRAACSCPRAP
Trigger: AGGTGCACGGGGGCATGAACAAGCTGCCCTCCGTCAACCAGCTGGTGGGCCAGCCTCCCCCGCACAGTTCGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000354437.8
ENST00000378285.5
ENST00000378288.8
ENST00000378290.4
ENST00000378295.9
CDS GCA 72 bp GGGACCCCGAGACCATGGACTGGGCGCTGTGGCTGCTaGTCATCTCGCCGTTGGCTGGCACTGCGTGGCCAT +
Preference number: 6 (lower is better)
Translates to: GTPRPWTGRCGC*SSRRWLALRGH
Trigger: ATGGCCACGCAGTGCCAGCCAACGGCGAGATGAGCAGCAGCCACAGCGCCCAGTCCATGGTCTCGGGGTCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000354437.8
ENST00000357733.7
ENST00000378280.5
ENST00000378285.5
ENST00000378288.8
ENST00000378290.4
ENST00000378295.9
ENST00000603362.5
ENST00000604566.1
CDS GCA 72 bp AGTGGGACCCCGAGACCATGGACTGGGCGCTGTGGCTaGTGCTCATCTCGCCGTTGGCTGGCACTGCGTGGC +
Preference number: 6 (lower is better)
Translates to: SGTPRPWTGRCG*CSSRRWLALRG
Trigger: GCCACGCAGTGCCAGCCAACGGCGAGATGAGCAGCAGCCACAGCGCCCAGTCCATGGTCTCGGGGTCCCACT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000354437.8
ENST00000357733.7
ENST00000378280.5
ENST00000378285.5
ENST00000378288.8
ENST00000378290.4
ENST00000378295.9
ENST00000603362.5
ENST00000604566.1
CDS GCA 72 bp GCTGTGGCTGCTGCTCATCTCGCCGTTGGCTGGCACTaGGTGGCCATGGTTGTTGAGCATCCCGGGGCGGCC +
Preference number: 6 (lower is better)
Translates to: AVAAAHLAVGWH*VAMVVEHPGAA
Trigger: GGCCGCCCCGGGATGCTCAACAACCATGGCCACGCAGTGCCAGCCAACGGCGAGATGAGCAGCAGCCACAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357733.7
ENST00000378280.5
ENST00000603362.5
ENST00000604566.1
CDS CCA 72 bp CGTCGGTCACGTGCTCCGCTTTCTTGTAAACAGGCATaGCCCGGATGGCGGTGCCTGGGGGTGGCGGGGTGG +
Preference number: 6 (lower is better)
Translates to: RRSRAPLSCKQA*PGWRCLGVAGW
Trigger: CCACCCCGCCACCCCCAGGCACCGCCATCCGGGCCATGCCTGTTTACAAGAAAGCGGAGCACGTGACCGACG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000346387.8
ENST00000354437.8
ENST00000357733.7
ENST00000378280.5
ENST00000378285.5
ENST00000378288.8
ENST00000378290.4
ENST00000378295.9
ENST00000603362.5
ENST00000603364.5
ENST00000604074.5
ENST00000604479.5
CDS CCA 72 bp TGGCTGCTGCTCATCTCGCCGTTGGCTGGCACTGCGTaGCCATGGTTGTTGAGCATCCCGGGGCCCACGGGC +
Preference number: 6 (lower is better)
Translates to: WLLLISPLAGTA*PWLLSIPGPTG
Trigger: GCCCGTGGGCCCCGGGATGCTCAACAACCATGGCCACGCAGTGCCAGCCAACGGCGAGATGAGCAGCAGCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354437.8
ENST00000378285.5
ENST00000378288.8
ENST00000378290.4
ENST00000378295.9
CDS CCA 72 bp GTGCAGTGGGACCCCGAGACCATGGACTGGGCGCTGTaGCTGCTGCTCATCTCGCCGTTGGCTGGCACTGCG +
Preference number: 6 (lower is better)
Translates to: VQWDPETMDWAL*LLLISPLAGTA
Trigger: CGCAGTGCCAGCCAACGGCGAGATGAGCAGCAGCCACAGCGCCCAGTCCATGGTCTCGGGGTCCCACTGCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000354437.8
ENST00000357733.7
ENST00000378280.5
ENST00000378285.5
ENST00000378288.8
ENST00000378290.4
ENST00000378295.9
ENST00000603362.5
ENST00000604566.1
CDS CCA 72 bp GGTGGCGGAGTGCAGTGGGACCCCGAGACCATGGACTaGGCGCTGTGGCTGCTGCTCATCTCGCCGTTGGCT +
Preference number: 6 (lower is better)
Translates to: GGGVQWDPETMD*ALWLLLISPLA
Trigger: AGCCAACGGCGAGATGAGCAGCAGCCACAGCGCCCAGTCCATGGTCTCGGGGTCCCACTGCACTCCGCCACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000354437.8
ENST00000357733.7
ENST00000378280.5
ENST00000378285.5
ENST00000378288.8
ENST00000378290.4
ENST00000378295.9
ENST00000603362.5
ENST00000604566.1
CDS CAA 72 bp CTCTGCTTGAAGGCACGCTTGCTGGCGGCCCCGTTCTaGGCGGAGCTCTCGTTCAGGGCCTGCTGCTCCCGG +
Preference number: 6 (lower is better)
Translates to: LCLKARLLAAPF*AELSFRACCSR
Trigger: CCGGGAGCAGCAGGCCCTGAACGAGAGCTCCGCCAAGAACGGGGCCGCCAGCAAGCGTGCCTTCAAGCAGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000346387.8
ENST00000354437.8
ENST00000357733.7
ENST00000378280.5
ENST00000378285.5
ENST00000378288.8
ENST00000378290.4
ENST00000378295.9
ENST00000603362.5
ENST00000603364.5
ENST00000604074.5
ENST00000604479.5
ENST00000604566.1
CDS CAA 72 bp ATCTCGCCGTTGGCTGGCACTGCGTGGCCATGGTTGTaGAGCATCCCGGGGCCCACGGGCCCCAGGTTGGGT +
Preference number: 6 (lower is better)
Translates to: ISPLAGTAWPWL*SIPGPTGPRLG
Trigger: ACCCAACCTGGGGCCCGTGGGCCCCGGGATGCTCAACAACCATGGCCACGCAGTGCCAGCCAACGGCGAGAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354437.8
ENST00000378285.5
ENST00000378288.8
ENST00000378290.4
ENST00000378295.9
CDS CAA 72 bp CTCATCTCGCCGTTGGCTGGCACTGCGTGGCCATGGTaGTTGAGCATCCCGGGGCCCACGGGCCCCAGGTTG +
Preference number: 6 (lower is better)
Translates to: LISPLAGTAWPW*LSIPGPTGPRL
Trigger: CAACCTGGGGCCCGTGGGCCCCGGGATGCTCAACAACCATGGCCACGCAGTGCCAGCCAACGGCGAGATGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354437.8
ENST00000378285.5
ENST00000378288.8
ENST00000378290.4
ENST00000378295.9
CDS GCA 72 bp GCTGTGGCTGCTGCTCATCTCGCCGTTGGCTGGCACTaGGTGGCCATGGTTGTTGAGCATCCCGGGGCCCAC +
Preference number: 6 (lower is better)
Translates to: AVAAAHLAVGWH*VAMVVEHPGAH
Trigger: GTGGGCCCCGGGATGCTCAACAACCATGGCCACGCAGTGCCAGCCAACGGCGAGATGAGCAGCAGCCACAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354437.8
ENST00000378285.5
ENST00000378288.8
ENST00000378290.4
ENST00000378295.9
CDS GCA 72 bp CAGATGCGGCCCTCAAAGGACCGGCGGCCCAGCACCTaGCCACTGTCGGGTGGGCACAGCCAGAATTGTGAG +
Preference number: 6 (lower is better)
Translates to: QMRPSKDRRPST*PLSGGHSQNCE
Trigger: CTCACAATTCTGGCTGTGCCCACCCGACAGTGGGCAGGTGCTGGGCCGCCGGTCCTTTGAGGGCCGCATCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604566.1
CDS CCA 72 bp TGGCTGCTGCTCATCTCGCCGTTGGCTGGCACTGCGTaGCCATGGTTGTTGAGCATCCCGGGGCGGCCTCTG +
Preference number: 6 (lower is better)
Translates to: WLLLISPLAGTA*PWLLSIPGRPL
Trigger: CAGAGGCCGCCCCGGGATGCTCAACAACCATGGCCACGCAGTGCCAGCCAACGGCGAGATGAGCAGCAGCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357733.7
ENST00000378280.5
ENST00000603362.5
ENST00000604566.1
CDS CCA 72 bp AGGGCAGCTTGTTCATGCCCCCGTGCACCTTGTTCATaGGCGAGAGGACCGGCCCGTAGGACGGGGGCTGTA +
Preference number: 6 (lower is better)
Translates to: RAACSCPRAPCS*ARGPARRTGAV
Trigger: TACAGCCCCCGTCCTACGGGCCGGTCCTCTCGCCCATGAACAAGGTGCACGGGGGCATGAACAAGCTGCCCT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000354437.8
ENST00000378285.5
ENST00000378288.8
ENST00000378290.4
ENST00000378295.9
CDS CCA 72 bp CCCAAATCCACCCACCCGCAGATGCGTCTCGCTGCCTaGAGGAGGCAGGTTCTGCAGACCCTAGGGCTGTGG +
Preference number: 6 (lower is better)
Translates to: PKSTHPQMRLAA*RRQVLQTLGLW
Trigger: CCACAGCCCTAGGGTCTGCAGAACCTGCCTCCTCCAGGCAGCGAGACGCATCTGCGGGTGGGTGGATTTGGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604194.1
CDS CAA 72 bp GGAGGCTGGCCCACCAGCTGGTTGACGGAGGGCAGCTaGTTCATGCCCCCGTGCACCTTGTTCATGGGCGAG +
Preference number: 6 (lower is better)
Translates to: GGWPTSWLTEGS*FMPPCTLFMGE
Trigger: CTCGCCCATGAACAAGGTGCACGGGGGCATGAACAAGCTGCCCTCCGTCAACCAGCTGGTGGGCCAGCCTCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354437.8
ENST00000378285.5
ENST00000378288.8
ENST00000378290.4
ENST00000378295.9
CDS CAA 90 bp GGTGTAGCTGCCGAACTGTGCGGGGGAGGCTGGCCCACCAGCTGGTaGACGGAGGGCAGCTTGTTCATGCCCCCGTGCACCTTGTTCATG +
Preference number: 6 (lower is better)
Translates to: GVAAELCGGGWPTSW*TEGSLFMPPCTLFM
Trigger: CATGAACAAGGTGCACGGGGGCATGAACAAGCTGCCCTCCGTCAACCAGCTGGTGGGCCAGCCTCCCCCGCACAGTTCGGCAGCTACACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000354437.8
ENST00000378285.5
ENST00000378288.8
ENST00000378290.4
ENST00000378295.9
CDS CAA 90 bp CAGAGATCTCACCAGCAGGGCCAAGTCCGTCCCCTCTGTGGCCCTTaGGAGGCTGACTGGCTCTGGCCACTCACGTCTAGAGGGGTGGGC +
Preference number: 6 (lower is better)
Translates to: QRSHQQGQVRPLCGP*EADWLWPLTSRGVG
Trigger: GCCCACCCCTCTAGACGTGAGTGGCCAGAGCCAGTCAGCCTCCAAAGGGCCACAGAGGGGACGGACTTGGCCCTGCTGGTGAGATCTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000604194.1
CDS GCA 72 bp GAGGAGGAGATGTGGGGTGGGCTCTGCTCTGGACCCTaGTGCCTGTCCCTGGCAGATGATGCCTTCTGGAGG +
Preference number: 6 (lower is better)
Translates to: EEEMWGGLCSGP*CLSLADDAFWR
Trigger: CCTCCAGAAGGCATCATCTGCCAGGGACAGGCAGCAGGGTCCAGAGCAGAGCCCACCCCACATCTCCTCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000603364.5
CDS CCA 72 bp TGTCTGGTTCCAGAGAGCTCCAGAGGTGCTCAAACGTaGTGCCCCCATCAGGGGAGGTGGCGGTGGACTGGG +
Preference number: 6 (lower is better)
Translates to: CLVPESSRGAQT*CPHQGRWRWTG
Trigger: CCCAGTCCACCGCCACCTCCCCTGATGGGGGCACCACGTTTGAGCACCTCTGGAGCTCTCTGGAACCAGACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000346387.8
ENST00000354437.8
ENST00000357733.7
ENST00000378295.9
ENST00000603362.5
ENST00000604074.5
ENST00000604479.5
CDS CCA 72 bp ATCCCACCTGAGCATGGGGAAGCCGCTGGCCAGTCTTaGCAGAGATCTCACCAGCAGGGCCAAGTCCGTCCC +
Preference number: 6 (lower is better)
Translates to: IPPEHGEAAGQS*QRSHQQGQVRP
Trigger: GGGACGGACTTGGCCCTGCTGGTGAGATCTCTGCCAAGACTGGCCAGCGGCTTCCCCATGCTCAGGTGGGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000604194.1
CDS GCA 72 bp AAAGCCCAAATCCACCCACCCGCAGATGCGTCTCGCTaGCTGGAGGAGGCAGGTTCTGCAGACCCTAGGGCT +
Preference number: 6 (lower is better)
Translates to: KAQIHPPADASR*LEEAGSADPRA
Trigger: AGCCCTAGGGTCTGCAGAACCTGCCTCCTCCAGGCAGCGAGACGCATCTGCGGGTGGGTGGATTTGGGCTTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604194.1
CDS CCA 72 bp GCAGACTGTCCTTCGTTGAAGTCCCTCCCGAGCTCGTaGTTGGGGCAGCGTTTCACGACGTCGGTCACGTGC +
Preference number: 6 (lower is better)
Translates to: ADCPSLKSLPSS*LGQRFTTSVTC
Trigger: GCACGTGACCGACGTCGTGAAACGCTGCCCCAACCACGAGCTCGGGAGGGACTTCAACGAAGGACAGTCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000346387.8
ENST00000354437.8
ENST00000357733.7
ENST00000378280.5
ENST00000378285.5
ENST00000378288.8
ENST00000378290.4
ENST00000378295.9
ENST00000603362.5
ENST00000603364.5
ENST00000604074.5
ENST00000604479.5
CDS CCA 72 bp GCCTGGAGGAGGCAGGTTCTGCAGACCCTAGGGCTGTaGGCCTGTCTCGGACAGACAACTCTTGGCAGCAGA +
Preference number: 6 (lower is better)
Translates to: AWRRQVLQTLGL*ACLGQTTLGSR
Trigger: TCTGCTGCCAAGAGTTGTCTGTCCGAGACAGGCCCACAGCCCTAGGGTCTGCAGAACCTGCCTCCTCCAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604194.1
CDS CAA 72 bp GACTGTCCTTCGTTGAAGTCCCTCCCGAGCTCGTGGTaGGGGCAGCGTTTCACGACGTCGGTCACGTGCTCC +
Preference number: 6 (lower is better)
Translates to: DCPSLKSLPSSW*GQRFTTSVTCS
Trigger: GGAGCACGTGACCGACGTCGTGAAACGCTGCCCCAACCACGAGCTCGGGAGGGACTTCAACGAAGGACAGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000346387.8
ENST00000354437.8
ENST00000357733.7
ENST00000378280.5
ENST00000378285.5
ENST00000378288.8
ENST00000378290.4
ENST00000378295.9
ENST00000603362.5
ENST00000603364.5
ENST00000604074.5
ENST00000604479.5
CDS CAA 72 bp ATGGACTGGGCGCTGTGGCTGCTGCTCATCTCGCCGTaGGCTGGCACTGCGTGGCCATGGTTGTTGAGCATC +
Preference number: 6 (lower is better)
Translates to: MDWALWLLLISP*AGTAWPWLLSI
Trigger: GATGCTCAACAACCATGGCCACGCAGTGCCAGCCAACGGCGAGATGAGCAGCAGCCACAGCGCCCAGTCCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000354437.8
ENST00000357733.7
ENST00000378280.5
ENST00000378285.5
ENST00000378288.8
ENST00000378290.4
ENST00000378295.9
ENST00000603362.5
ENST00000604566.1
CDS CAA 90 bp GCTGGAGCAGACTGTCCTTCGTTGAAGTCCCTCCCGAGCTCGTGGTaGGGGCAGCGTTTCACGACGTCGGTCACGTGCTCCGCTTTCTTG +
Preference number: 6 (lower is better)
Translates to: AGADCPSLKSLPSSW*GQRFTTSVTCSAFL
Trigger: CAAGAAAGCGGAGCACGTGACCGACGTCGTGAAACGCTGCCCCAACCACGAGCTCGGGAGGGACTTCAACGAAGGACAGTCTGCTCCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000346387.8
ENST00000354437.8
ENST00000357733.7
ENST00000378280.5
ENST00000378285.5
ENST00000378288.8
ENST00000378290.4
ENST00000378295.9
ENST00000603362.5
ENST00000603364.5
ENST00000604074.5
ENST00000604479.5
CDS CAA 90 bp CCATGCTGGAATCCGTTCCGCCCACCACCTCATTATTCCCCCGGCTaGACTGGGGAAGGTCGAAGTAGGTGCTGTCTGGTTCCAGAGAGC +
Preference number: 6 (lower is better)
Translates to: PCWNPFRPPPHYSPG*TGEGRSRCCLVPES
Trigger: GCTCTCTGGAACCAGACAGCACCTACTTCGACCTTCCCCAGTCAAGCCGGGGGAATAATGAGGTGGTGGGCGGAACGGATTCCAGCATGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000346387.8
ENST00000354437.8
ENST00000357733.7
ENST00000378295.9
ENST00000603362.5
ENST00000604074.5
ENST00000604479.5
CDS CAA 90 bp CTCTGCCTGCCGGTGACAGGGTCATCCACATACTGCGAGAGATTATaGCCTTCCACGCGGATGAGGTGGCTGGCTGGAGCAGACTGTCCT +
Preference number: 6 (lower is better)
Translates to: LCLPVTGSSTYCERL*PSTRMRWLAGADCP
Trigger: AGGACAGTCTGCTCCAGCCAGCCACCTCATCCGCGTGGAAGGCAATAATCTCTCGCAGTATGTGGATGACCCTGTCACCGGCAGGCAGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000346387.8
ENST00000354437.8
ENST00000357733.7
ENST00000378280.5
ENST00000378285.5
ENST00000378288.8
ENST00000378290.4
ENST00000378295.9
ENST00000603362.5
ENST00000603364.5
ENST00000604074.5
ENST00000604479.5
CDS TCA 72 bp ATCCGTTCCGCCCACCACCTCATTATTCCCCCGGCTTaGCTGGGGAAGGTCGAAGTAGGTGCTGTCTGGTTC +
Preference number: 6 (lower is better)
Translates to: IRSAHHLIIPPA*LGKVEVGAVWF
Trigger: GAACCAGACAGCACCTACTTCGACCTTCCCCAGTCAAGCCGGGGGAATAATGAGGTGGTGGGCGGAACGGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000346387.8
ENST00000354437.8
ENST00000357733.7
ENST00000378295.9
ENST00000603362.5
ENST00000604074.5
ENST00000604479.5
CDS TCA 72 bp GTGGCTCATAGGGCACCACGACGCTCTGCCTGCCGGTaGCAGGGTCATCCACATACTGCGAGAGATTATTGC +
Preference number: 6 (lower is better)
Translates to: VAHRAPRRSACR*QGHPHTARDYC
Trigger: GCAATAATCTCTCGCAGTATGTGGATGACCCTGTCACCGGCAGGCAGAGCGTCGTGGTGCCCTATGAGCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000346387.8
ENST00000354437.8
ENST00000357733.7
ENST00000378280.5
ENST00000378285.5
ENST00000378288.8
ENST00000378290.4
ENST00000378295.9
ENST00000603362.5
ENST00000603364.5
ENST00000604074.5
ENST00000604479.5
CDS GCA 72 bp ACGCTCTGCCTGCCGGTGACAGGGTCATCCACATACTaGGAGAGATTATTGCCTTCCACGCGGATGAGGTGG +
Preference number: 6 (lower is better)
Translates to: TLCLPVTGSSTY*ERLLPSTRMRW
Trigger: CCACCTCATCCGCGTGGAAGGCAATAATCTCTCGCAGTATGTGGATGACCCTGTCACCGGCAGGCAGAGCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000346387.8
ENST00000354437.8
ENST00000357733.7
ENST00000378280.5
ENST00000378285.5
ENST00000378288.8
ENST00000378290.4
ENST00000378295.9
ENST00000603362.5
ENST00000603364.5
ENST00000604074.5
ENST00000604479.5
CDS CCA 72 bp AACTGGGCCATGACAGATGTAGTCATGCCCTCCAGGTaGAAGACGTCCATGCTGGAATCCGTTCCGCCCACC +
Preference number: 6 (lower is better)
Translates to: NWAMTDVVMPSR*KTSMLESVPPT
Trigger: GGTGGGCGGAACGGATTCCAGCATGGACGTCTTCCACCTGGAGGGCATGACTACATCTGTCATGGCCCAGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000346387.8
ENST00000354437.8
ENST00000357733.7
ENST00000378295.9
ENST00000603362.5
ENST00000604074.5
ENST00000604479.5
CDS CCA 72 bp GAGATTATTGCCTTCCACGCGGATGAGGTGGCTGGCTaGAGCAGACTGTCCTTCGTTGAAGTCCCTCCCGAG +
Preference number: 6 (lower is better)
Translates to: EIIAFHADEVAG*SRLSFVEVPPE
Trigger: CTCGGGAGGGACTTCAACGAAGGACAGTCTGCTCCAGCCAGCCACCTCATCCGCGTGGAAGGCAATAATCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000346387.8
ENST00000354437.8
ENST00000357733.7
ENST00000378280.5
ENST00000378285.5
ENST00000378288.8
ENST00000378290.4
ENST00000378295.9
ENST00000603362.5
ENST00000603364.5
ENST00000604074.5
ENST00000604479.5
CDS CCA 72 bp CCTTTCCACTCAGCAGACATTTACAAGGCCCCTCAGTaGCAGAGGCATAGCAAGGGCCATGACCCAGGGTCC +
Preference number: 6 (lower is better)
Translates to: PFHSADIYKAPQ*QRHSKGHDPGS
Trigger: GGACCCTGGGTCATGGCCCTTGCTATGCCTCTGCCACTGAGGGGCCTTGTAAATGTCTGCTGAGTGGAAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000603364.5
CDS CAA 72 bp CCGGTGACAGGGTCATCCACATACTGCGAGAGATTATaGCCTTCCACGCGGATGAGGTGGCTGGCTGGAGCA +
Preference number: 6 (lower is better)
Translates to: PVTGSSTYCERL*PSTRMRWLAGA
Trigger: TGCTCCAGCCAGCCACCTCATCCGCGTGGAAGGCAATAATCTCTCGCAGTATGTGGATGACCCTGTCACCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000346387.8
ENST00000354437.8
ENST00000357733.7
ENST00000378280.5
ENST00000378285.5
ENST00000378288.8
ENST00000378290.4
ENST00000378295.9
ENST00000603362.5
ENST00000603364.5
ENST00000604074.5
ENST00000604479.5
CDS TCA 72 bp CTGTCCAGGACAGGATTTCAAACCAAAGATCCCACCTaGGCATGGGGAAGCCGCTGGCCAGTCTTGGCAGAG +
Preference number: 6 (lower is better)
Translates to: LSRTGFQTKDPT*AWGSRWPVLAE
Trigger: CTCTGCCAAGACTGGCCAGCGGCTTCCCCATGCTCAGGTGGGATCTTTGGTTTGAAATCCTGTCCTGGACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000604194.1
CDS GCA 72 bp TATTCCCCCGGCTTGACTGGGGAAGGTCGAAGTAGGTaGTGTCTGGTTCCAGAGAGCTCCAGAGGTGCTCAA +
Preference number: 6 (lower is better)
Translates to: YSPGLTGEGRSR*CLVPESSRGAQ
Trigger: TTGAGCACCTCTGGAGCTCTCTGGAACCAGACAGCACCTACTTCGACCTTCCCCAGTCAAGCCGGGGGAATA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000346387.8
ENST00000354437.8
ENST00000357733.7
ENST00000378295.9
ENST00000603362.5
ENST00000604074.5
ENST00000604479.5
CDS CCA 72 bp GGGAGCAGTGATGGAGTCAGCCCTGTGCGTTGTTGGTaGGTGCAAGAGTTAGCTCAACTCAAAGCCCTGAGC +
Preference number: 6 (lower is better)
Translates to: GSSDGVSPVRCW*VQELAQLKALS
Trigger: GCTCAGGGCTTTGAGTTGAGCTAACTCTTGCACCCACCAACAACGCACAGGGCTGACTCCATCACTGCTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604194.1
CDS CAA 72 bp AATCCGTTCCGCCCACCACCTCATTATTCCCCCGGCTaGACTGGGGAAGGTCGAAGTAGGTGCTGTCTGGTT +
Preference number: 6 (lower is better)
Translates to: NPFRPPPHYSPG*TGEGRSRCCLV
Trigger: AACCAGACAGCACCTACTTCGACCTTCCCCAGTCAAGCCGGGGGAATAATGAGGTGGTGGGCGGAACGGATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000346387.8
ENST00000354437.8
ENST00000357733.7
ENST00000378295.9
ENST00000603362.5
ENST00000604074.5
ENST00000604479.5
CDS GCA 72 bp GCATGCCAATTCCTGGAAATGACACTCCAGAGACAGTaGCAGCAAAGCCCAAATCCACCCACCCGCAGATGC +
Preference number: 6 (lower is better)
Translates to: ACQFLEMTLQRQ*QQSPNPPTRRC
Trigger: GCATCTGCGGGTGGGTGGATTTGGGCTTTGCTGGCACTGTCTCTGGAGTGTCATTTCCAGGAATTGGCATGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604194.1
CDS GCA 72 bp CTTGGCACGGTGGTTCCACCCCATCTCCTTGGTGCATaGCAATTCCTGGAAATGACACTCCAGAGACAGTGC +
Preference number: 6 (lower is better)
Translates to: LGTVVPPHLLGA*QFLEMTLQRQC
Trigger: GCACTGTCTCTGGAGTGTCATTTCCAGGAATTGGCATGCACCAAGGAGATGGGGTGGAACCACCGTGCCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000604194.1
CDS CCA 72 bp AAGGGGAGCAGTGATGGAGTCAGCCCTGTGCGTTGTTaGTGGGTGCAAGAGTTAGCTCAACTCAAAGCCCTG +
Preference number: 6 (lower is better)
Translates to: KGSSDGVSPVRC*WVQELAQLKAL
Trigger: CAGGGCTTTGAGTTGAGCTAACTCTTGCACCCACCAACAACGCACAGGGCTGACTCCATCACTGCTCCCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000604194.1
CDS CAA 90 bp CAACTCAAAGCCCTGAGCATGGTGCCTGGCTCGAGGAGACTGGCCTaGTGCACAGGTGATGTTATCAGAATTAGCAAGATCCCCACCGTG +
Preference number: 6 (lower is better)
Translates to: QLKALSMVPGSRRLA*CTGDVIRISKIPTV
Trigger: CACGGTGGGGATCTTGCTAATTCTGATAACATCACCTGTGCACAAGGCCAGTCTCCTCGAGCCAGGCACCATGCTCAGGGCTTTGAGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000604194.1
CDS GCA 72 bp CTGTCTCGGACAGACAACTCTTGGCAGCAGAGCCCGTaGCTCTGTCCAGGACAGGATTTCAAACCAAAGATC +
Preference number: 6 (lower is better)
Translates to: LSRTDNSWQQSP*LCPGQDFKPKI
Trigger: GATCTTTGGTTTGAAATCCTGTCCTGGACAGAGGCACGGGCTCTGCTGCCAAGAGTTGTCTGTCCGAGACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604194.1
CDS GCA 72 bp CTGAGCATGGTGCCTGGCTCGAGGAGACTGGCCTTGTaGACAGGTGATGTTATCAGAATTAGCAAGATCCCC +
Preference number: 6 (lower is better)
Translates to: LSMVPGSRRLAL*TGDVIRISKIP
Trigger: GGGGATCTTGCTAATTCTGATAACATCACCTGTGCACAAGGCCAGTCTCCTCGAGCCAGGCACCATGCTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604194.1
CDS TCA 72 bp TCTGCAGGTGGTAAATGCTCTGTAACCCTTGGGAGGTaGAATACTCGATGCAGTTTGGACACCCCAATCCTG +
Preference number: 6 (lower is better)
Translates to: SAGGKCSVTLGR*NTRCSLDTPIL
Trigger: CAGGATTGGGGTGTCCAAACTGCATCGAGTATTTCACCTCCCAAGGGTTACAGAGCATTTACCACCTGCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000346387.8
ENST00000378280.5
ENST00000378288.8
ENST00000378290.4
ENST00000378295.9
ENST00000604479.5
ENST00000604566.1