RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TP63 (Homo sapiens)

Ensembl gene IDs: ENSG00000073282

Ensembl transcript IDs: ENST00000264731.8, ENST00000320472.9, ENST00000354600.10, ENST00000392460.7, ENST00000392461.7, ENST00000392463.6, ENST00000418709.6, ENST00000434928.5, ENST00000437221.5, ENST00000440651.6, ENST00000449992.5, ENST00000456148.1, ENST00000460036.1, ENST00000486398.1

Found 616 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GAGCCCACACTGACTGTAGAGGCACTGCTTGGGGTCCGCAGGAGATaGGAAGGGGAGGAGAATTCGTGGAGCTGCCGGTGGTCCAGGATG +
Preference number: 1 (lower is better)
Translates to: EPTLTVEALLGVRRR*EGEENSWSCRWSRM
Trigger: CATCCTGGACCACCGGCAGCTCCACGAATTCTCCTCCCCTTCTCATCTCCTGCGGACCCCAAGCAGTGCCTCTACAGTCAGTGTGGGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320472.9
3UTR CCA 90 bp AAGTTGAAGTCATTCCACTCATCTCGGGGTGGGAAAGAGATGGTCTaGCGGAGGGTGAATCGCACAGCATCAATAACACGCTCACCCCGG +
Preference number: 1 (lower is better)
Translates to: KLKSFHSSRGGKEMV*RRVNRTASITRSPR
Trigger: CCGGGGTGAGCGTGTTATTGATGCTGTGCGATTCACCCTCCGCCAGACCATCTCTTTCCCACCCCGAGATGAGTGGAATGACTTCAACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320472.9
3UTR GCA 90 bp AGCTCACATGGTGAGGCTCACTCCCCCTCCTCTTTGATGCGCTGTTaGTTATTGCGGCGAGCATCCATGTCAAAGTTGAAGTCATTCCAC +
Preference number: 1 (lower is better)
Translates to: SSHGEAHSPSSLMRC*LLRRASMSKLKSFH
Trigger: GTGGAATGACTTCAACTTTGACATGGATGCTCGCCGCAATAAGCAACAGCGCATCAAAGAGGAGGGGGAGTGAGCCTCACCATGTGAGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000320472.9
3UTR CCA 90 bp GCGAGCATCCATGTCAAAGTTGAAGTCATTCCACTCATCTCGGGGTaGGAAAGAGATGGTCTGGCGGAGGGTGAATCGCACAGCATCAAT +
Preference number: 1 (lower is better)
Translates to: ASIHVKVEVIPLISG*ERDGLAEGESHSIN
Trigger: ATTGATGCTGTGCGATTCACCCTCCGCCAGACCATCTCTTTCCCACCCCGAGATGAGTGGAATGACTTCAACTTTGACATGGATGCTCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320472.9
3UTR CCA 90 bp CCTTCAAAAGATTCTCTCACTAGTGGCTTTGTGCCTTTGAGCAGTTaGGTCTCTGAGCCAAAGTGTCTTCAAGTCCTGTTTATGAGGGCT +
Preference number: 1 (lower is better)
Translates to: PSKDSLTSGFVPLSS*VSEPKCLQVLFMRA
Trigger: AGCCCTCATAAACAGGACTTGAAGACACTTTGGCTCAGAGACCCAACTGCTCAAAGGCACAAAGCCACTAGTGAGAGAATCTTTTGAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418709.6
ENST00000437221.5
3UTR TCA 90 bp TTTGAGTCCCTTCAAAAGATTCTCTCACTAGTGGCTTTGTGCCTTTaGGCAGTTGGGTCTCTGAGCCAAAGTGTCTTCAAGTCCTGTTTA +
Preference number: 1 (lower is better)
Translates to: FESLQKILSLVALCL*AVGSLSQSVFKSCL
Trigger: TAAACAGGACTTGAAGACACTTTGGCTCAGAGACCCAACTGCTCAAAGGCACAAAGCCACTAGTGAGAGAATCTTTTGAAGGGACTCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418709.6
ENST00000437221.5
3UTR TCA 90 bp TGGCAGAGGCAGGTACACAGCATTAAGAAATGTTCTACCTACACATaGGGGGAGGACACAAATAATGCAAGTTCTCACAAAGAACTCTCC +
Preference number: 1 (lower is better)
Translates to: WQRQVHSIKKCSTYT*GEDTNNASSHKELS
Trigger: GGAGAGTTCTTTGTGAGAACTTGCATTATTTGTGTCCTCCCCTCATGTGTAGGTAGAACATTTCTTAATGCTGTGTACCTGCCTCTGCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000418709.6
ENST00000437221.5
3UTR TCA 90 bp TTTCAAGGGAACTCTTCGTTTAAGTGGTTTAAGCAACAGCAGCCATaGAAGACTTATCTCTTGCTCTGTGGGGACCTTTCATGTCTATGG +
Preference number: 1 (lower is better)
Translates to: FQGNSSFKWFKQQQP*KTYLLLCGDLSCLW
Trigger: CCATAGACATGAAAGGTCCCCACAGAGCAAGAGATAAGTCTTTCATGGCTGCTGTTGCTTAAACCACTTAAACGAAGAGTTCCCTTGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264731.8
ENST00000354600.10
3UTR CCA 90 bp ATCTTTAATTTCCAGTCCAGGAGTGCTGATTTTAACACGTCTGCTTaGATCTCACTTACTCAAAACGTAAGTCTCCTGGCTAAATGCACT +
Preference number: 1 (lower is better)
Translates to: IFNFQSRSADFNTSA*ISLTQNVSLLAKCT
Trigger: AGTGCATTTAGCCAGGAGACTTACGTTTTGAGTAAGTGAGATCCAAGCAGACGTGTTAAAATCAGCACTCCTGGACTGGAAATTAAAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418709.6
ENST00000437221.5
3UTR TCA 90 bp TGCACTTTAAAATTAAAATGGAAGCTTATGTGCAATGACAGCCCTTaGCCAGAATGCATGGGAAGATTTCAGAGCTCATTTGCATGCATG +
Preference number: 1 (lower is better)
Translates to: CTLKLKWKLMCNDSP*PECMGRFQSSFACM
Trigger: CATGCATGCAAATGAGCTCTGAAATCTTCCCATGCATTCTGGTCAAGGGCTGTCATTGCACATAAGCTTCCATTTTAATTTTAAAGTGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264731.8
ENST00000354600.10
3UTR GCA 90 bp ACCAAGGAACAGCTTTCATTCTTCCCCTTAATGGGTTTGCAAAGCTaGATGCTTGTTGCAGAAGTTTACAGTGCTTATTACCATTTAAGT +
Preference number: 1 (lower is better)
Translates to: TKEQLSFFPLMGLQS*MLVAEVYSAYYHLS
Trigger: ACTTAAATGGTAATAAGCACTGTAAACTTCTGCAACAAGCATGCAGCTTTGCAAACCCATTAAGGGGAAGAATGAAAGCTGTTCCTTGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264731.8
ENST00000354600.10
3UTR CCA 90 bp TTCATGTACAAGAAAAACTTTAGCATAACAGATGCCAACATACAGTaGCAGAGGCAGGTACACAGCATTAAGAAATGTTCTACCTACACA +
Preference number: 1 (lower is better)
Translates to: FMYKKNFSITDANIQ*QRQVHSIKKCSTYT
Trigger: TGTGTAGGTAGAACATTTCTTAATGCTGTGTACCTGCCTCTGCCACTGTATGTTGGCATCTGTTATGCTAAAGTTTTTCTTGTACATGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000418709.6
ENST00000437221.5
3UTR GCA 90 bp GCTTTCATTCTTCCCCTTAATGGGTTTGCAAAGCTGCATGCTTGTTaGAGAAGTTTACAGTGCTTATTACCATTTAAGTACAACAAAACT +
Preference number: 1 (lower is better)
Translates to: AFILPLNGFAKLHAC*RSLQCLLPFKYNKT
Trigger: AGTTTTGTTGTACTTAAATGGTAATAAGCACTGTAAACTTCTGCAACAAGCATGCAGCTTTGCAAACCCATTAAGGGGAAGAATGAAAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264731.8
ENST00000354600.10
3UTR GCA 90 bp CTTAATGGGTTTGCAAAGCTGCATGCTTGTTGCAGAAGTTTACAGTaGTTATTACCATTTAAGTACAACAAAACTTTGAAATCAAGGACT +
Preference number: 1 (lower is better)
Translates to: LNGFAKLHACCRSLQ*LLPFKYNKTLKSRT
Trigger: AGTCCTTGATTTCAAAGTTTTGTTGTACTTAAATGGTAATAAGCACTGTAAACTTCTGCAACAAGCATGCAGCTTTGCAAACCCATTAAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264731.8
ENST00000354600.10
3UTR-3UTR GCA 90 bp ATTCCACTCATCTCGGGGTGGGAAAGAGATGGTCTGGCGGAGGGTGAATCGCACGAGAATTCGTGGAGCTaGCGGTGGTCCAGGATGCCC +
Preference number: 2 (lower is better)
Translates to: IPLISGWERDGLAEGESHENSWS*RWSRMP
Trigger: GGGCATCCTGGACCACCGGCAGCTCCACGAATTCTC...GTGCGATTCACCCTCCGCCAGACCATCTCTTTCCCACCCCGAGATGAGTGGAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320472.9
3UTR-3UTR CCA 90 bp GGTCTGGCGGAGGGTGAATCGCACAGCATCAATAACACGCTCACCCCGGGTCTCTGTAGAGGCACTGCTTaGGGTCCGCAGGAGATGAGA +
Preference number: 2 (lower is better)
Translates to: GLAEGESHSINNTLTPGLCRGTA*GPQEMR
Trigger: TCTCATCTCCTGCGGACCCCAAGCAGTGCCTCTACA...GAGACCCGGGGTGAGCGTGTTATTGATGCTGTGCGATTCACCCTCCGCCAGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320472.9
3UTR-3UTR GCA 90 bp GCAGTTAGGAGAGGGATAGGAAGAGCTCACATGGTGAGGCTCACTCCCCCTCCTTGCGCTGTTGCTTATTaGGGCGAGCATCCATGTCAA +
Preference number: 2 (lower is better)
Translates to: AVRRGIGRAHMVRLTPPPCAVAY*GEHPCQ
Trigger: TTGACATGGATGCTCGCCGCAATAAGCAACAGCGCA...AGGAGGGGGAGTGAGCCTCACCATGTGAGCTCTTCCTATCCCTCTCCTAACTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000320472.9
3UTR CAA 90 bp AGGGATAGGAAGAGCTCACATGGTGAGGCTCACTCCCCCTCCTCTTaGATGCGCTGTTGCTTATTGCGGCGAGCATCCATGTCAAAGTTG +
Preference number: 2 (lower is better)
Translates to: RDRKSSHGEAHSPSS*MRCCLLRRASMSKL
Trigger: CAACTTTGACATGGATGCTCGCCGCAATAAGCAACAGCGCATCAAAGAGGAGGGGGAGTGAGCCTCACCATGTGAGCTCTTCCTATCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000320472.9
3UTR-3UTR TCA 90 bp AATAACACGCTCACCCCGGGTCTCACTGGAGCCCACACTGACTGTAGAGGCACTCTAGGGAGAAGGCTTTaGAGATTAAGCAGGAGTGCT +
Preference number: 2 (lower is better)
Translates to: NNTLTPGLTGAHTDCRGTLGRRL*RLSRSA
Trigger: AGCACTCCTGCTTAATCTTCAAAGCCTTCTCCCTAG...AGTGCCTCTACAGTCAGTGTGGGCTCCAGTGAGACCCGGGGTGAGCGTGTTATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320472.9
3UTR-3UTR GCA 90 bp CTCTTTGATGCGCTGTTGCTTATTGCGGCGAGCATCCATGTCAAAGTTGAAGTCGCCGGTGGTCCAGGATaGCCTTCCAGATCGCATGTC +
Preference number: 2 (lower is better)
Translates to: LFDALLLIAASIHVKVEVAGGPG*PSRSHV
Trigger: GACATGCGATCTGGAAGGGCATCCTGGACCACCGGC...GACTTCAACTTTGACATGGATGCTCGCCGCAATAAGCAACAGCGCATCAAAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320472.9
3UTR-3UTR CCA 90 bp GTAAGAGGTAGCCTCTTACTTCTCCTTCCCCTAAGAAATCAGACAAGAGGAAGGGGGGAGGAGAATTCGTaGAGCTGCCGGTGGTCCAGG +
Preference number: 2 (lower is better)
Translates to: VRGSLLLLLPLRNQTRGRGEENS*SCRWSR
Trigger: CCTGGACCACCGGCAGCTCCACGAATTCTCCTCCCC...CCTTCCTCTTGTCTGATTTCTTAGGGGAAGGAGAAGTAAGAGGCTACCTCTTAC
53% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000320472.9
3UTR CAA 90 bp CATGGTGAGGCTCACTCCCCCTCCTCTTTGATGCGCTGTTGCTTATaGCGGCGAGCATCCATGTCAAAGTTGAAGTCATTCCACTCATCT +
Preference number: 2 (lower is better)
Translates to: HGEAHSPSSLMRCCL*RRASMSKLKSFHSS
Trigger: AGATGAGTGGAATGACTTCAACTTTGACATGGATGCTCGCCGCAATAAGCAACAGCGCATCAAAGAGGAGGGGGAGTGAGCCTCACCATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000320472.9
3UTR-3UTR TCA 90 bp TCCCTAAGGGAGATGGACGGGAAACTGGGTTCTCACAGTTACTTTCCAACAAACGACGTCGGGTGTTTTTaGACTGGCTGCTATGGGCCT +
Preference number: 2 (lower is better)
Translates to: SLREMDGKLGSHSYFPTNDVGCF*TGCYGP
Trigger: AGGCCCATAGCAGCCAGTTCAAAAACACCCGACGTC...GTTTGTTGGAAAGTAACTGTGAGAACCCAGTTTCCCGTCCATCTCCCTTAGGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264731.8
ENST00000354600.10
3UTR CAA 90 bp TCTTTGATGCGCTGTTGCTTATTGCGGCGAGCATCCATGTCAAAGTaGAAGTCATTCCACTCATCTCGGGGTGGGAAAGAGATGGTCTGG +
Preference number: 2 (lower is better)
Translates to: SLMRCCLLRRASMSK*KSFHSSRGGKEMVW
Trigger: CCAGACCATCTCTTTCCCACCCCGAGATGAGTGGAATGACTTCAACTTTGACATGGATGCTCGCCGCAATAAGCAACAGCGCATCAAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320472.9
3UTR-3UTR TCA 90 bp TTTAGGGGGCTGGCAGTTAGGAGAGGGATAGGAAGAGCTCACATGGTGAGGCTCCATCCATGTCAAAGTTaGAGTCATTCCACTCATCTC +
Preference number: 2 (lower is better)
Translates to: FRGLAVRRGIGRAHMVRLHPCQS*SHSTHL
Trigger: GAGATGAGTGGAATGACTTCAACTTTGACATGGATG...GAGCCTCACCATGTGAGCTCTTCCTATCCCTCTCCTAACTGCCAGCCCCCTAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000320472.9
3UTR-3UTR TCA 90 bp TCCCTAAGGGAGATGGACGGGAAACTGGGTTCTCACAGTTACTTTCCAACAAACCTAGGGAGAAGGCTTTaGAGATTAAGCAGGAGTGCT +
Preference number: 2 (lower is better)
Translates to: SLREMDGKLGSHSYFPTNLGRRL*RLSRSA
Trigger: AGCACTCCTGCTTAATCTTCAAAGCCTTCTCCCTAG...GTTTGTTGGAAAGTAACTGTGAGAACCCAGTTTCCCGTCCATCTCCCTTAGGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264731.8
ENST00000354600.10
3UTR-3UTR TCA 90 bp TCTTTAATTTCCAGTCCAGGAGTGCTGATTTTAACACGTCTGCTTGGATCTCACGTGGCTTTGTGCCTTTaGGCAGTTGGGTCTCTGAGC +
Preference number: 2 (lower is better)
Translates to: SLISSPGVLILTRLLGSHVALCL*AVGSLS
Trigger: GCTCAGAGACCCAACTGCTCAAAGGCACAAAGCCAC...GTGAGATCCAAGCAGACGTGTTAAAATCAGCACTCCTGGACTGGAAATTAAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418709.6
ENST00000437221.5
3UTR-3UTR TCA 90 bp CAAAAACTTTTCAATTCTTCAGCTAACTGCATTGAGCTGAGGCCACAAGAACTCGAGAGTAGGCTGCCATaGGGAGGTAAGCCAGTAAGG +
Preference number: 2 (lower is better)
Translates to: QKLFNSSANCIELRPQELESRLP*GGKPVR
Trigger: CCTTACTGGCTTACCTCCTCATGGCAGCCTACTCTC...GAGTTCTTGTGGCCTCAGCTCAATGCAGTTAGCTGAAGAATTGAAAAGTTTTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264731.8
ENST00000354600.10
3UTR-3UTR TCA 90 bp ATGATCACCTCGCTGCCCAGCAGTACACTTGACACCTTCGTTTCTTACTACTTGTTAAAAGGGTCTGACTaGGTCTCTCAGTCACCTACA +
Preference number: 2 (lower is better)
Translates to: MITSLPSSTLDTFVSYYLLKGSD*VSQSPT
Trigger: TGTAGGTGACTGAGAGACTCAGTCAGACCCTTTTAA...CAAGTAGTAAGAAACGAAGGTGTCAAGTGTACTGCTGGGCAGCGAGGTGATCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418709.6
ENST00000437221.5
3UTR-3UTR CCA 90 bp GCTTGGATCTCACTTACTCAAAACGTAAGTCTCCTGGCTAAATGCACTGAACAGCACAGACAAACACAGTaGTTCCTCACCCACCAATGG +
Preference number: 2 (lower is better)
Translates to: AWISLTQNVSLLAKCTEQHRQTQ*FLTHQW
Trigger: CCATTGGTGGGTGAGGAACCACTGTGTTTGTCTGTG...CTGTTCAGTGCATTTAGCCAGGAGACTTACGTTTTGAGTAAGTGAGATCCAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418709.6
ENST00000437221.5
3UTR-3UTR CCA 90 bp TCTTTAATTTCCAGTCCAGGAGTGCTGATTTTAACACGTCTGCTTGGATCTCACCACAGACAAACACAGTaGTTCCTCACCCACCAATGG +
Preference number: 2 (lower is better)
Translates to: SLISSPGVLILTRLLGSHHRQTQ*FLTHQW
Trigger: CCATTGGTGGGTGAGGAACCACTGTGTTTGTCTGTG...GTGAGATCCAAGCAGACGTGTTAAAATCAGCACTCCTGGACTGGAAATTAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418709.6
ENST00000437221.5
3UTR-3UTR TCA 90 bp TCCCTAAGGGAGATGGACGGGAAACTGGGTTCTCACAGTTACTTTCCAACAAACATATGCTCAAATACATaGCGTCGGGTGTTTTTGAAC +
Preference number: 2 (lower is better)
Translates to: SLREMDGKLGSHSYFPTNICSNT*RRVFLN
Trigger: GTTCAAAAACACCCGACGTCATGTATTTGAGCATAT...GTTTGTTGGAAAGTAACTGTGAGAACCCAGTTTCCCGTCCATCTCCCTTAGGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264731.8
ENST00000354600.10
3UTR-3UTR TCA 90 bp TTCTTCCCCTTAATGGGTTTGCAAAGCTGCATGCTTGTTGCAGAAGTTTACAGTGAAGCTTATGTGCAATaGCAGCCCTTGACCAGAATG +
Preference number: 2 (lower is better)
Translates to: FFPLMGLQSCMLVAEVYSEAYVQ*QPLTRM
Trigger: CATTCTGGTCAAGGGCTGTCATTGCACATAAGCTTC...ACTGTAAACTTCTGCAACAAGCATGCAGCTTTGCAAACCCATTAAGGGGAAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264731.8
ENST00000354600.10
3UTR-3UTR TCA 90 bp CCCTTTCAATCTTTAATTTCCAGTCCAGGAGTGCTGATTTTAACACGTCTGCTTGAGCAGTTGGGTCTCTaGGCCAAAGTGTCTTCAAGT +
Preference number: 2 (lower is better)
Translates to: PFQSLISSPGVLILTRLLEQLGL*AKVSSS
Trigger: ACTTGAAGACACTTTGGCTCAGAGACCCAACTGCTC...AAGCAGACGTGTTAAAATCAGCACTCCTGGACTGGAAATTAAAGATTGAAAGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418709.6
ENST00000437221.5
3UTR-3UTR TCA 90 bp CTGCCCAGCAGTACACTTGACACCTTCGTTTCTTACTACTTGCAATATTATTACGAGCAGTTGGGTCTCTaGGCCAAAGTGTCTTCAAGT +
Preference number: 2 (lower is better)
Translates to: LPSSTLDTFVSYYLQYYYEQLGL*AKVSSS
Trigger: ACTTGAAGACACTTTGGCTCAGAGACCCAACTGCTC...GTAATAATATTGCAAGTAGTAAGAAACGAAGGTGTCAAGTGTACTGCTGGGCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418709.6
ENST00000437221.5
3UTR-3UTR TCA 90 bp TCTGCAGAAAACATCCTTTCTTGTAAAGGTTTGAGTCCCTTCAAAAGATTCTCTGTGGCTTTGTGCCTTTaGGCAGTTGGGTCTCTGAGC +
Preference number: 2 (lower is better)
Translates to: SAENILSCKGLSPFKRFSVALCL*AVGSLS
Trigger: GCTCAGAGACCCAACTGCTCAAAGGCACAAAGCCAC...AGAGAATCTTTTGAAGGGACTCAAACCTTTACAAGAAAGGATGTTTTCTGCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418709.6
ENST00000437221.5
3UTR-3UTR TCA 90 bp GCTTGGATCTCACTTACTCAAAACGTAAGTCTCCTGGCTAAATGCACTGAACAGTTAAAAGGGTCTGACTaGGTCTCTCAGTCACCTACA +
Preference number: 2 (lower is better)
Translates to: AWISLTQNVSLLAKCTEQLKGSD*VSQSPT
Trigger: TGTAGGTGACTGAGAGACTCAGTCAGACCCTTTTAA...CTGTTCAGTGCATTTAGCCAGGAGACTTACGTTTTGAGTAAGTGAGATCCAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418709.6
ENST00000437221.5
3UTR-3UTR CCA 90 bp CTGCCCAGCAGTACACTTGACACCTTCGTTTCTTACTACTTGCAATATTATTACGTGCCTTTGAGCAGTTaGGTCTCTGAGCCAAAGTGT +
Preference number: 2 (lower is better)
Translates to: LPSSTLDTFVSYYLQYYYVPLSS*VSEPKC
Trigger: ACACTTTGGCTCAGAGACCCAACTGCTCAAAGGCAC...GTAATAATATTGCAAGTAGTAAGAAACGAAGGTGTCAAGTGTACTGCTGGGCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418709.6
ENST00000437221.5
3UTR-3UTR TCA 90 bp CAAAAACTTTTCAATTCTTCAGCTAACTGCATTGAGCTGAGGCCACAAGAACTCCTAGGGAGAAGGCTTTaGAGATTAAGCAGGAGTGCT +
Preference number: 2 (lower is better)
Translates to: QKLFNSSANCIELRPQELLGRRL*RLSRSA
Trigger: AGCACTCCTGCTTAATCTTCAAAGCCTTCTCCCTAG...GAGTTCTTGTGGCCTCAGCTCAATGCAGTTAGCTGAAGAATTGAAAAGTTTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264731.8
ENST00000354600.10
3UTR-3UTR TCA 90 bp TTCTTCCCCTTAATGGGTTTGCAAAGCTGCATGCTTGTTGCAGAAGTTTACAGTACCTATCACCATACATaGTACCCCTTAAGGGAAGGA +
Preference number: 2 (lower is better)
Translates to: FFPLMGLQSCMLVAEVYSTYHHT*YPLREG
Trigger: TCCTTCCCTTAAGGGGTATCATGTATGGTGATAGGT...ACTGTAAACTTCTGCAACAAGCATGCAGCTTTGCAAACCCATTAAGGGGAAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264731.8
ENST00000354600.10
3UTR-3UTR TCA 90 bp CACTTTCTAGTGGTTTCTATGCTTACTATCCTTTTACCCCTTACCCTGGCTACTACCTATCACCATACATaGTACCCCTTAAGGGAAGGA +
Preference number: 2 (lower is better)
Translates to: HFLVVSMLTILLPLTLATTYHHT*YPLREG
Trigger: TCCTTCCCTTAAGGGGTATCATGTATGGTGATAGGT...AGTAGCCAGGGTAAGGGGTAAAAGGATAGTAAGCATAGAAACCACTAGAAAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000264731.8
ENST00000354600.10
3UTR-3UTR TCA 90 bp AAGGTAAACAAGCCTCTACATGCAGAGTTTTATAGAATAGGAGGGTCTTTAAAAGACGTCGGGTGTTTTTaGACTGGCTGCTATGGGCCT +
Preference number: 2 (lower is better)
Translates to: KVNKPLHAEFYRIGGSLKDVGCF*TGCYGP
Trigger: AGGCCCATAGCAGCCAGTTCAAAAACACCCGACGTC...TTTTAAAGACCCTCCTATTCTATAAAACTCTGCATGTAGAGGCTTGTTTACCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000264731.8
ENST00000354600.10
3UTR-3UTR TCA 90 bp TCTTTAATTTCCAGTCCAGGAGTGCTGATTTTAACACGTCTGCTTGGATCTCACTTCAAGTCCTGTTTATaGGGGCTAGATACACACGCA +
Preference number: 2 (lower is better)
Translates to: SLISSPGVLILTRLLGSHFKSCL*GLDTHA
Trigger: TGCGTGTGTATCTAGCCCTCATAAACAGGACTTGAA...GTGAGATCCAAGCAGACGTGTTAAAATCAGCACTCCTGGACTGGAAATTAAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418709.6
ENST00000437221.5
3UTR-3UTR CCA 90 bp CACTTTCTAGTGGTTTCTATGCTTACTATCCTTTTACCCCTTACCCTGGCTACTGACCTTTCATGTCTATaGGTAGTCCCTAAGGGAGAT +
Preference number: 2 (lower is better)
Translates to: HFLVVSMLTILLPLTLATDLSCL*VVPKGD
Trigger: ATCTCCCTTAGGGACTACCCATAGACATGAAAGGTC...AGTAGCCAGGGTAAGGGGTAAAAGGATAGTAAGCATAGAAACCACTAGAAAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264731.8
ENST00000354600.10
3UTR-3UTR CCA 90 bp ATGGTAAACAACTACGTAAGGGCAATATTACTGGGGTGGATTTGTCTTTCTATTGATGCCAACATACAGTaGCAGAGGCAGGTACACAGC +
Preference number: 2 (lower is better)
Translates to: MVNNYVRAILLGWICLSIDANIQ*QRQVHS
Trigger: GCTGTGTACCTGCCTCTGCCACTGTATGTTGGCATC...AATAGAAAGACAAATCCACCCCAGTAATATTGCCCTTACGTAGTTGTTTACCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418709.6
ENST00000437221.5
3UTR CAA 90 bp ACACAAATAATGCAAGTTCTCACAAAGAACTCTCCACCCACAAAGTaGATTACTTTTGGTAATGATCACCTCGCTGCCCAGCAGTACACT +
Preference number: 2 (lower is better)
Translates to: TQIMQVLTKNSPPTK*ITFGNDHLAAQQYT
Trigger: AGTGTACTGCTGGGCAGCGAGGTGATCATTACCAAAAGTAATCAACTTTGTGGGTGGAGAGTTCTTTGTGAGAACTTGCATTATTTGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418709.6
ENST00000437221.5
3UTR-3UTR TCA 90 bp CACTTTCTAGTGGTTTCTATGCTTACTATCCTTTTACCCCTTACCCTGGCTACTCTAGTGCCAAATCCATaGGACACAGTACAGGAATTT +
Preference number: 2 (lower is better)
Translates to: HFLVVSMLTILLPLTLATLVPNP*DTVQEF
Trigger: AAATTCCTGTACTGTGTCTCATGGATTTGGCACTAG...AGTAGCCAGGGTAAGGGGTAAAAGGATAGTAAGCATAGAAACCACTAGAAAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264731.8
ENST00000354600.10
3UTR-3UTR GCA 90 bp CACTTTCTAGTGGTTTCTATGCTTACTATCCTTTTACCCCTTACCCTGGCTACTGAAAGACTTATCTCTTaGTCTGTGGGGACCTTTCAT +
Preference number: 2 (lower is better)
Translates to: HFLVVSMLTILLPLTLATERLIS*SVGTFH
Trigger: ATGAAAGGTCCCCACAGAGCAAGAGATAAGTCTTTC...AGTAGCCAGGGTAAGGGGTAAAAGGATAGTAAGCATAGAAACCACTAGAAAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000264731.8
ENST00000354600.10
3UTR-3UTR CCA 90 bp CAAAAACTTTTCAATTCTTCAGCTAACTGCATTGAGCTGAGGCCACAAGAACTCAGATGGACGGGAAACTaGGTTCTCACAGTTACTTTC +
Preference number: 2 (lower is better)
Translates to: QKLFNSSANCIELRPQELRWTGN*VLTVTF
Trigger: GAAAGTAACTGTGAGAACCCAGTTTCCCGTCCATCT...GAGTTCTTGTGGCCTCAGCTCAATGCAGTTAGCTGAAGAATTGAAAAGTTTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264731.8
ENST00000354600.10
3UTR-3UTR CCA 90 bp TTCTTCCCCTTAATGGGTTTGCAAAGCTGCATGCTTGTTGCAGAAGTTTACAGTCTTTTAGAGCCACGCTaGCCCTTTTGCACTTTAAAA +
Preference number: 2 (lower is better)
Translates to: FFPLMGLQSCMLVAEVYSLLEPR*PFCTLK
Trigger: TTTTAAAGTGCAAAAGGGCCAGCGTGGCTCTAAAAG...ACTGTAAACTTCTGCAACAAGCATGCAGCTTTGCAAACCCATTAAGGGGAAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000264731.8
ENST00000354600.10
3UTR-3UTR CCA 90 bp CACTTTCTAGTGGTTTCTATGCTTACTATCCTTTTACCCCTTACCCTGGCTACTTTTCAAGTGTGGTTCTaGAAATCCCACTATCCCAAG +
Preference number: 2 (lower is better)
Translates to: HFLVVSMLTILLPLTLATFQVWF*KSHYPK
Trigger: CTTGGGATAGTGGGATTTCCAGAACCACACTTGAAA...AGTAGCCAGGGTAAGGGGTAAAAGGATAGTAAGCATAGAAACCACTAGAAAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000264731.8
ENST00000354600.10
3UTR-3UTR TCA 90 bp ATGGTAAACAACTACGTAAGGGCAATATTACTGGGGTGGATTTGTCTTTCTATTGCCCAGCAGTACACTTaGCACCTTCGTTTCTTACTA +
Preference number: 2 (lower is better)
Translates to: MVNNYVRAILLGWICLSIAQQYT*HLRFLL
Trigger: TAGTAAGAAACGAAGGTGTCAAGTGTACTGCTGGGC...AATAGAAAGACAAATCCACCCCAGTAATATTGCCCTTACGTAGTTGTTTACCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418709.6
ENST00000437221.5
3UTR-3UTR TCA 90 bp TCTTTAATTTCCAGTCCAGGAGTGCTGATTTTAACACGTCTGCTTGGATCTCACCTCCACCCACAAAGTTaGTTACTTTTGGTAATGATC +
Preference number: 2 (lower is better)
Translates to: SLISSPGVLILTRLLGSHLHPQS*LLLVMI
Trigger: GATCATTACCAAAAGTAATCAACTTTGTGGGTGGAG...GTGAGATCCAAGCAGACGTGTTAAAATCAGCACTCCTGGACTGGAAATTAAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418709.6
ENST00000437221.5
3UTR-3UTR TCA 90 bp CCCTTTCAATCTTTAATTTCCAGTCCAGGAGTGCTGATTTTAACACGTCTGCTTTGTTCTACCTACACATaGGGGGAGGACACAAATAAT +
Preference number: 2 (lower is better)
Translates to: PFQSLISSPGVLILTRLLCSTYT*GEDTNN
Trigger: ATTATTTGTGTCCTCCCCTCATGTGTAGGTAGAACA...AAGCAGACGTGTTAAAATCAGCACTCCTGGACTGGAAATTAAAGATTGAAAGGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000418709.6
ENST00000437221.5
3UTR-3UTR TCA 90 bp CCCTTTCAATCTTTAATTTCCAGTCCAGGAGTGCTGATTTTAACACGTCTGCTTATTAAAAGCACAAAATaGGTTCACCTGCTATGGGGG +
Preference number: 2 (lower is better)
Translates to: PFQSLISSPGVLILTRLLIKSTK*VHLLWG
Trigger: CCCCCATAGCAGGTGAACTCATTTTGTGCTTTTAAT...AAGCAGACGTGTTAAAATCAGCACTCCTGGACTGGAAATTAAAGATTGAAAGGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000418709.6
ENST00000437221.5
3UTR-3UTR GCA 90 bp CAAAAACTTTTCAATTCTTCAGCTAACTGCATTGAGCTGAGGCCACAAGAACTCTCAATGAGAAATCTCTaGAGCTTAAGGAGACACCCA +
Preference number: 2 (lower is better)
Translates to: QKLFNSSANCIELRPQELSMRNL*SLRRHP
Trigger: TGGGTGTCTCCTTAAGCTGCAGAGATTTCTCATTGA...GAGTTCTTGTGGCCTCAGCTCAATGCAGTTAGCTGAAGAATTGAAAAGTTTTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264731.8
ENST00000354600.10
3UTR-3UTR GCA 90 bp CAAAAACTTTTCAATTCTTCAGCTAACTGCATTGAGCTGAGGCCACAAGAACTCGAAAGACTTATCTCTTaGTCTGTGGGGACCTTTCAT +
Preference number: 2 (lower is better)
Translates to: QKLFNSSANCIELRPQELERLIS*SVGTFH
Trigger: ATGAAAGGTCCCCACAGAGCAAGAGATAAGTCTTTC...GAGTTCTTGTGGCCTCAGCTCAATGCAGTTAGCTGAAGAATTGAAAAGTTTTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000264731.8
ENST00000354600.10
3UTR-3UTR GCA 90 bp CACTTTCTAGTGGTTTCTATGCTTACTATCCTTTTACCCCTTACCCTGGCTACTAAGCTGCATGCTTGTTaGAGAAGTTTACAGTGCTTA +
Preference number: 2 (lower is better)
Translates to: HFLVVSMLTILLPLTLATKLHAC*RSLQCL
Trigger: TAAGCACTGTAAACTTCTGCAACAAGCATGCAGCTT...AGTAGCCAGGGTAAGGGGTAAAAGGATAGTAAGCATAGAAACCACTAGAAAGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264731.8
ENST00000354600.10
3UTR-3UTR CCA 90 bp TTCTTCCCCTTAATGGGTTTGCAAAGCTGCATGCTTGTTGCAGAAGTTTACAGTAACTCTTCGTTTAAGTaGTTTAAGCAACAGCAGCCA +
Preference number: 2 (lower is better)
Translates to: FFPLMGLQSCMLVAEVYSNSSFK*FKQQQP
Trigger: TGGCTGCTGTTGCTTAAACCACTTAAACGAAGAGTT...ACTGTAAACTTCTGCAACAAGCATGCAGCTTTGCAAACCCATTAAGGGGAAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264731.8
ENST00000354600.10
3UTR-3UTR TCA 90 bp CACTTTCTAGTGGTTTCTATGCTTACTATCCTTTTACCCCTTACCCTGGCTACTAAGAAAATGATACAGTaGTGCAATTTATGCCACAGG +
Preference number: 2 (lower is better)
Translates to: HFLVVSMLTILLPLTLATKKMIQ*CNLCHR
Trigger: CCTGTGGCATAAATTGCATCACTGTATCATTTTCTT...AGTAGCCAGGGTAAGGGGTAAAAGGATAGTAAGCATAGAAACCACTAGAAAGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000264731.8
ENST00000354600.10
3UTR-3UTR GCA 90 bp CACTTTCTAGTGGTTTCTATGCTTACTATCCTTTTACCCCTTACCCTGGCTACTTTAAACAATACTCAATaGCCCCCACCCAAAAATCTA +
Preference number: 2 (lower is better)
Translates to: HFLVVSMLTILLPLTLATLNNTQ*PPPKNL
Trigger: TAGATTTTTGGGTGGGGGGCATTGAGTATTGTTTAA...AGTAGCCAGGGTAAGGGGTAAAAGGATAGTAAGCATAGAAACCACTAGAAAGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000264731.8
ENST00000354600.10
3UTR-3UTR GCA 90 bp CAAAAACTTTTCAATTCTTCAGCTAACTGCATTGAGCTGAGGCCACAAGAACTCAAGCTGCATGCTTGTTaGAGAAGTTTACAGTGCTTA +
Preference number: 2 (lower is better)
Translates to: QKLFNSSANCIELRPQELKLHAC*RSLQCL
Trigger: TAAGCACTGTAAACTTCTGCAACAAGCATGCAGCTT...GAGTTCTTGTGGCCTCAGCTCAATGCAGTTAGCTGAAGAATTGAAAAGTTTTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264731.8
ENST00000354600.10
3UTR-3UTR TCA 90 bp CAAAAACTTTTCAATTCTTCAGCTAACTGCATTGAGCTGAGGCCACAAGAACTCAAGAAAATGATACAGTaGTGCAATTTATGCCACAGG +
Preference number: 2 (lower is better)
Translates to: QKLFNSSANCIELRPQELKKMIQ*CNLCHR
Trigger: CCTGTGGCATAAATTGCATCACTGTATCATTTTCTT...GAGTTCTTGTGGCCTCAGCTCAATGCAGTTAGCTGAAGAATTGAAAAGTTTTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000264731.8
ENST00000354600.10
3UTR-3UTR TCA 90 bp ATGGTAAACAACTACGTAAGGGCAATATTACTGGGGTGGATTTGTCTTTCTATTTGTTCTACCTACACATaGGGGGAGGACACAAATAAT +
Preference number: 2 (lower is better)
Translates to: MVNNYVRAILLGWICLSICSTYT*GEDTNN
Trigger: ATTATTTGTGTCCTCCCCTCATGTGTAGGTAGAACA...AATAGAAAGACAAATCCACCCCAGTAATATTGCCCTTACGTAGTTGTTTACCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000418709.6
ENST00000437221.5
3UTR-3UTR GCA 90 bp CAAAAACTTTTCAATTCTTCAGCTAACTGCATTGAGCTGAGGCCACAAGAACTCTTAAACAATACTCAATaGCCCCCACCCAAAAATCTA +
Preference number: 2 (lower is better)
Translates to: QKLFNSSANCIELRPQELLNNTQ*PPPKNL
Trigger: TAGATTTTTGGGTGGGGGGCATTGAGTATTGTTTAA...GAGTTCTTGTGGCCTCAGCTCAATGCAGTTAGCTGAAGAATTGAAAAGTTTTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000264731.8
ENST00000354600.10
3UTR-3UTR CCA 90 bp TTCTTCCCCTTAATGGGTTTGCAAAGCTGCATGCTTGTTGCAGAAGTTTACAGTCTCAAAGGTTTGATGTaGCATGTATTTAGAATCCAA +
Preference number: 2 (lower is better)
Translates to: FFPLMGLQSCMLVAEVYSLKGLM*HVFRIQ
Trigger: TTGGATTCTAAATACATGCCACATCAAACCTTTGAG...ACTGTAAACTTCTGCAACAAGCATGCAGCTTTGCAAACCCATTAAGGGGAAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264731.8
ENST00000354600.10
3UTR-3UTR CCA 90 bp TTCTTCCCCTTAATGGGTTTGCAAAGCTGCATGCTTGTTGCAGAAGTTTACAGTACTTCTTCTTATAACTaGATTAAATCACCCCAACGT +
Preference number: 2 (lower is better)
Translates to: FFPLMGLQSCMLVAEVYSTSSYN*IKSPQR
Trigger: ACGTTGGGGTGATTTAATCCAGTTATAAGAAGAAGT...ACTGTAAACTTCTGCAACAAGCATGCAGCTTTGCAAACCCATTAAGGGGAAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264731.8
ENST00000354600.10
3UTR-3UTR CCA 90 bp CAAAAACTTTTCAATTCTTCAGCTAACTGCATTGAGCTGAGGCCACAAGAACTCAAAAGGTTTCAAGTGTaGTTCTGGAAATCCCACTAT +
Preference number: 2 (lower is better)
Translates to: QKLFNSSANCIELRPQELKRFQV*FWKSHY
Trigger: ATAGTGGGATTTCCAGAACCACACTTGAAACCTTTT...GAGTTCTTGTGGCCTCAGCTCAATGCAGTTAGCTGAAGAATTGAAAAGTTTTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000264731.8
ENST00000354600.10
3UTR-3UTR TCA 90 bp AAGGTAAACAAGCCTCTACATGCAGAGTTTTATAGAATAGGAGGGTCTTTAAAAGAGGACGTTTGGACATaGACTTCTTCTTATAACTGG +
Preference number: 2 (lower is better)
Translates to: KVNKPLHAEFYRIGGSLKEDVWT*TSSYNW
Trigger: CCAGTTATAAGAAGAAGTTCATGTCCAAACGTCCTC...TTTTAAAGACCCTCCTATTCTATAAAACTCTGCATGTAGAGGCTTGTTTACCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264731.8
ENST00000354600.10
3UTR-3UTR CCA 90 bp AAGGTAAACAAGCCTCTACATGCAGAGTTTTATAGAATAGGAGGGTCTTTAAAACTCAAAGGTTTGATGTaGCATGTATTTAGAATCCAA +
Preference number: 2 (lower is better)
Translates to: KVNKPLHAEFYRIGGSLKLKGLM*HVFRIQ
Trigger: TTGGATTCTAAATACATGCCACATCAAACCTTTGAG...TTTTAAAGACCCTCCTATTCTATAAAACTCTGCATGTAGAGGCTTGTTTACCTT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264731.8
ENST00000354600.10
3UTR CCA 72 bp CTCACTGGAGCCCACACTGACTGTAGAGGCACTGCTTaGGGTCCGCAGGAGATGAGAAGGGGAGGAGAATTC +
Preference number: 3 (lower is better)
Translates to: LTGAHTDCRGTA*GPQEMRRGGEF
Trigger: GAATTCTCCTCCCCTTCTCATCTCCTGCGGACCCCAAGCAGTGCCTCTACAGTCAGTGTGGGCTCCAGTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320472.9
3UTR TCA 72 bp CTGGCTACTCATACACTCAAGGAGAGTAGGCTGCCATaGGGAGGTAAGCCAGTAAGGGTGCCTCGCTTTGGC +
Preference number: 3 (lower is better)
Translates to: LATHTLKESRLP*GGKPVRVPRFG
Trigger: GCCAAAGCGAGGCACCCTTACTGGCTTACCTCCTCATGGCAGCCTACTCTCCTTGAGTGTATGAGTAGCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264731.8
ENST00000354600.10
3UTR TCA 72 bp AGAGCTCACATGGTGAGGCTCACTCCCCCTCCTCTTTaGTGCGCTGTTGCTTATTGCGGCGAGCATCCATGT +
Preference number: 3 (lower is better)
Translates to: RAHMVRLTPPPL*CAVAYCGEHPC
Trigger: ACATGGATGCTCGCCGCAATAAGCAACAGCGCATCAAAGAGGAGGGGGAGTGAGCCTCACCATGTGAGCTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000320472.9
3UTR GCA 72 bp GGTGAGGCTCACTCCCCCTCCTCTTTGATGCGCTGTTaGTTATTGCGGCGAGCATCCATGTCAAAGTTGAAG +
Preference number: 3 (lower is better)
Translates to: GEAHSPSSLMRC*LLRRASMSKLK
Trigger: CTTCAACTTTGACATGGATGCTCGCCGCAATAAGCAACAGCGCATCAAAGAGGAGGGGGAGTGAGCCTCACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000320472.9
3UTR CCA 72 bp TCATTCCACTCATCTCGGGGTGGGAAAGAGATGGTCTaGCGGAGGGTGAATCGCACAGCATCAATAACACGC +
Preference number: 3 (lower is better)
Translates to: SFHSSRGGKEMV*RRVNRTASITR
Trigger: GCGTGTTATTGATGCTGTGCGATTCACCCTCCGCCAGACCATCTCTTTCCCACCCCGAGATGAGTGGAATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320472.9
3UTR CCA 72 bp CATGTCAAAGTTGAAGTCATTCCACTCATCTCGGGGTaGGAAAGAGATGGTCTGGCGGAGGGTGAATCGCAC +
Preference number: 3 (lower is better)
Translates to: HVKVEVIPLISG*ERDGLAEGESH
Trigger: GTGCGATTCACCCTCCGCCAGACCATCTCTTTCCCACCCCGAGATGAGTGGAATGACTTCAACTTTGACATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320472.9
3UTR CCA 72 bp ACTTATCTCTTGCTCTGTGGGGACCTTTCATGTCTATaGGTAGTCCCTAAGGGAGATGGACGGGAAACTGGG +
Preference number: 3 (lower is better)
Translates to: TYLLLCGDLSCL*VVPKGDGRETG
Trigger: CCCAGTTTCCCGTCCATCTCCCTTAGGGACTACCCATAGACATGAAAGGTCCCCACAGAGCAAGAGATAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264731.8
ENST00000354600.10
3UTR TCA 72 bp GCTGTTGCTTATTGCGGCGAGCATCCATGTCAAAGTTaGAGTCATTCCACTCATCTCGGGGTGGGAAAGAGA +
Preference number: 3 (lower is better)
Translates to: AVAYCGEHPCQS*SHSTHLGVGKR
Trigger: TCTCTTTCCCACCCCGAGATGAGTGGAATGACTTCAACTTTGACATGGATGCTCGCCGCAATAAGCAACAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320472.9
3UTR TCA 72 bp GGGTCTCTGAGCCAAAGTGTCTTCAAGTCCTGTTTATaGGGGCTAGATACACACGCACACACATACACACAC +
Preference number: 3 (lower is better)
Translates to: GSLSQSVFKSCL*GLDTHAHTYTH
Trigger: GTGTGTGTATGTGTGTGCGTGTGTATCTAGCCCTCATAAACAGGACTTGAAGACACTTTGGCTCAGAGACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418709.6
ENST00000437221.5
3UTR-3UTR CAA 90 bp GCTTGGATCTCACTTACTCAAAACGTAAGTCTCCTGGCTAAATGCACTGAACAGTGCCCAGCAGTACACTaGACACCTTCGTTTCTTACT +
Preference number: 3 (lower is better)
Translates to: AWISLTQNVSLLAKCTEQCPAVH*TPSFLT
Trigger: AGTAAGAAACGAAGGTGTCAAGTGTACTGCTGGGCA...CTGTTCAGTGCATTTAGCCAGGAGACTTACGTTTTGAGTAAGTGAGATCCAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418709.6
ENST00000437221.5
3UTR TCA 72 bp TGCAAGTTCTCACAAAGAACTCTCCACCCACAAAGTTaGTTACTTTTGGTAATGATCACCTCGCTGCCCAGC +
Preference number: 3 (lower is better)
Translates to: CKFSQRTLHPQS*LLLVMITSLPS
Trigger: GCTGGGCAGCGAGGTGATCATTACCAAAAGTAATCAACTTTGTGGGTGGAGAGTTCTTTGTGAGAACTTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418709.6
ENST00000437221.5
3UTR CCA 72 bp TGGTTTCTATGCTTACTATCCTTTTACCCCTTACCCTaGCTACTCATACACTCAAGGAGAGTAGGCTGCCAT +
Preference number: 3 (lower is better)
Translates to: WFLCLLSFYPLP*LLIHSRRVGCH
Trigger: ATGGCAGCCTACTCTCCTTGAGTGTATGAGTAGCCAGGGTAAGGGGTAAAAGGATAGTAAGCATAGAAACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264731.8
ENST00000354600.10
3UTR CCA 72 bp TTCCAGTCCAGGAGTGCTGATTTTAACACGTCTGCTTaGATCTCACTTACTCAAAACGTAAGTCTCCTGGCT +
Preference number: 3 (lower is better)
Translates to: FQSRSADFNTSA*ISLTQNVSLLA
Trigger: AGCCAGGAGACTTACGTTTTGAGTAAGTGAGATCCAAGCAGACGTGTTAAAATCAGCACTCCTGGACTGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418709.6
ENST00000437221.5
3UTR CCA 72 bp AGCTTATGTGCAATGACAGCCCTTGACCAGAATGCATaGGAAGATTTCAGAGCTCATTTGCATGCATGCAAA +
Preference number: 3 (lower is better)
Translates to: SLCAMTALDQNA*EDFRAHLHACK
Trigger: TTTGCATGCATGCAAATGAGCTCTGAAATCTTCCCATGCATTCTGGTCAAGGGCTGTCATTGCACATAAGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264731.8
ENST00000354600.10
3UTR-3UTR CAA 90 bp TCCCTAAGGGAGATGGACGGGAAACTGGGTTCTCACAGTTACTTTCCAACAAACGATCTACTCAAAGGTTaGATGTGGCATGTATTTAGA +
Preference number: 3 (lower is better)
Translates to: SLREMDGKLGSHSYFPTNDLLKG*MWHVFR
Trigger: TCTAAATACATGCCACATCAAACCTTTGAGTAGATC...GTTTGTTGGAAAGTAACTGTGAGAACCCAGTTTCCCGTCCATCTCCCTTAGGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264731.8
ENST00000354600.10
3UTR TCA 72 bp TTAAATTTAAGGGGGTTACTGATATGCTCAAATACATaGCGTCGGGTGTTTTTGAACTGGCTGCTATGGGCC +
Preference number: 3 (lower is better)
Translates to: LNLRGLLICSNT*RRVFLNWLLWA
Trigger: GGCCCATAGCAGCCAGTTCAAAAACACCCGACGTCATGTATTTGAGCATATCAGTAACCCCCTTAAATTTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000264731.8
ENST00000354600.10
3UTR TCA 72 bp AACTCTTCGTTTAAGTGGTTTAAGCAACAGCAGCCATaGAAGACTTATCTCTTGCTCTGTGGGGACCTTTCA +
Preference number: 3 (lower is better)
Translates to: NSSFKWFKQQQP*KTYLLLCGDLS
Trigger: TGAAAGGTCCCCACAGAGCAAGAGATAAGTCTTTCATGGCTGCTGTTGCTTAAACCACTTAAACGAAGAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264731.8
ENST00000354600.10
3UTR-3UTR CAA 90 bp CACTTTCTAGTGGTTTCTATGCTTACTATCCTTTTACCCCTTACCCTGGCTACTGCCACGCTGGCCCTTTaGCACTTTAAAATTAAAATG +
Preference number: 3 (lower is better)
Translates to: HFLVVSMLTILLPLTLATATLAL*HFKIKM
Trigger: CATTTTAATTTTAAAGTGCAAAAGGGCCAGCGTGGC...AGTAGCCAGGGTAAGGGGTAAAAGGATAGTAAGCATAGAAACCACTAGAAAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000264731.8
ENST00000354600.10
3UTR-3UTR CAA 90 bp TTCTTCCCCTTAATGGGTTTGCAAAGCTGCATGCTTGTTGCAGAAGTTTACAGTGCCACGCTGGCCCTTTaGCACTTTAAAATTAAAATG +
Preference number: 3 (lower is better)
Translates to: FFPLMGLQSCMLVAEVYSATLAL*HFKIKM
Trigger: CATTTTAATTTTAAAGTGCAAAAGGGCCAGCGTGGC...ACTGTAAACTTCTGCAACAAGCATGCAGCTTTGCAAACCCATTAAGGGGAAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000264731.8
ENST00000354600.10
3UTR-3UTR CAA 90 bp TCTTTAATTTCCAGTCCAGGAGTGCTGATTTTAACACGTCTGCTTGGATCTCACAAAGACATCTTAAGTTaGAGACCTGCTCAAAAGCTT +
Preference number: 3 (lower is better)
Translates to: SLISSPGVLILTRLLGSHKDILS*RPAQKL
Trigger: AAGCTTTTGAGCAGGTCTCAAACTTAAGATGTCTTT...GTGAGATCCAAGCAGACGTGTTAAAATCAGCACTCCTGGACTGGAAATTAAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418709.6
ENST00000437221.5
3UTR TCA 72 bp TTTGGTAATGATCACCTCGCTGCCCAGCAGTACACTTaGCACCTTCGTTTCTTACTACTTGCAATATTATTA +
Preference number: 3 (lower is better)
Translates to: FGNDHLAAQQYT*HLRFLLLAILL
Trigger: TAATAATATTGCAAGTAGTAAGAAACGAAGGTGTCAAGTGTACTGCTGGGCAGCGAGGTGATCATTACCAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418709.6
ENST00000437221.5
3UTR TCA 72 bp CAGGTACACAGCATTAAGAAATGTTCTACCTACACATaGGGGGAGGACACAAATAATGCAAGTTCTCACAAA +
Preference number: 3 (lower is better)
Translates to: QVHSIKKCSTYT*GEDTNNASSHK
Trigger: TTTGTGAGAACTTGCATTATTTGTGTCCTCCCCTCATGTGTAGGTAGAACATTTCTTAATGCTGTGTACCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000418709.6
ENST00000437221.5
3UTR GCA 72 bp CTTCCCCTTAATGGGTTTGCAAAGCTGCATGCTTGTTaGAGAAGTTTACAGTGCTTATTACCATTTAAGTAC +
Preference number: 3 (lower is better)
Translates to: LPLNGFAKLHAC*RSLQCLLPFKY
Trigger: GTACTTAAATGGTAATAAGCACTGTAAACTTCTGCAACAAGCATGCAGCTTTGCAAACCCATTAAGGGGAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264731.8
ENST00000354600.10
3UTR-3UTR CAA 90 bp CAAAAACTTTTCAATTCTTCAGCTAACTGCATTGAGCTGAGGCCACAAGAACTCGATCTACTCAAAGGTTaGATGTGGCATGTATTTAGA +
Preference number: 3 (lower is better)
Translates to: QKLFNSSANCIELRPQELDLLKG*MWHVFR
Trigger: TCTAAATACATGCCACATCAAACCTTTGAGTAGATC...GAGTTCTTGTGGCCTCAGCTCAATGCAGTTAGCTGAAGAATTGAAAAGTTTTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264731.8
ENST00000354600.10
3UTR TCA 72 bp AAATTAAAATGGAAGCTTATGTGCAATGACAGCCCTTaGCCAGAATGCATGGGAAGATTTCAGAGCTCATTT +
Preference number: 3 (lower is better)
Translates to: KLKWKLMCNDSP*PECMGRFQSSF
Trigger: AAATGAGCTCTGAAATCTTCCCATGCATTCTGGTCAAGGGCTGTCATTGCACATAAGCTTCCATTTTAATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264731.8
ENST00000354600.10
CDS-3UTR TCA 90 bp AACACGCTCACCCCGGGTCTCACTGGAGCCCACACTGACTGTAGAGGCACTGCTAGGGCGAGGGCGCCGTaGCGCTGTTCTGCGCGTGGT +
Preference number: 4 (lower is better)
Translates to: NTLTPGLTGAHTDCRGTARARAP*RCSARG
Trigger: ACCACGCGCAGAACAGCGTCACGGCGCCCTCGCCCT...AGCAGTGCCTCTACAGTCAGTGTGGGCTCCAGTGAGACCCGGGGTGAGCGTGTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320472.9
CDS-3UTR CCA 90 bp AGGGGAGGAGAATTCGTGGAGCTGCCGGTGGTCCAGGATGCCCTTCCAGATCGCGGCTCAGCTCATGGTTaGGGCACCGCTTCACCACCT +
Preference number: 4 (lower is better)
Translates to: RGGEFVELPVVQDALPDRGSAHG*GTASPP
Trigger: AGGTGGTGAAGCGGTGCCCCAACCATGAGCTGAGCC...GCGATCTGGAAGGGCATCCTGGACCACCGGCAGCTCCACGAATTCTCCTCCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320472.9
CDS-3UTR GCA 90 bp ACACGCTCACCCCGGGTCTCACTGGAGCCCACACTGACTGTAGAGGCACTGCTTGCCGGTGGTCCAGGATaGCCTTCCAGATCGCATGTC +
Preference number: 4 (lower is better)
Translates to: TRSPRVSLEPTLTVEALLAGGPG*PSRSHV
Trigger: GACATGCGATCTGGAAGGGCATCCTGGACCACCGGC...AAGCAGTGCCTCTACAGTCAGTGTGGGCTCCAGTGAGACCCGGGGTGAGCGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320472.9
CDS-3UTR CCA 90 bp CGCACAGCATCAATAACACGCTCACCCCGGGTCTCACTGGAGCCCACACTGACTGGGGAGGAGAATTCGTaGAGCTGCCGGTGGTCCAGG +
Preference number: 4 (lower is better)
Translates to: RTASITRSPRVSLEPTLTGEENS*SCRWSR
Trigger: CCTGGACCACCGGCAGCTCCACGAATTCTCCTCCCC...AGTCAGTGTGGGCTCCAGTGAGACCCGGGGTGAGCGTGTTATTGATGCTGTGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320472.9
CDS-3UTR GCA 90 bp AGGGGAGGAGAATTCGTGGAGCTGCCGGTGGTCCAGGATGCCCTTCCAGATCGCTTGGCGGTGCTCGACTaGTGGAAGGACACGTCGAAA +
Preference number: 4 (lower is better)
Translates to: RGGEFVELPVVQDALPDRLAVLD*WKDTSK
Trigger: TTTCGACGTGTCCTTCCAGCAGTCGAGCACCGCCAA...GCGATCTGGAAGGGCATCCTGGACCACCGGCAGCTCCACGAATTCTCCTCCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320472.9
CDS-3UTR TCA 90 bp AATAACACGCTCACCCCGGGTCTCACTGGAGCCCACACTGACTGTAGAGGCACTCGGATAACAGCTCCCTaGGGAGGTGGGGTCATCACC +
Preference number: 4 (lower is better)
Translates to: NNTLTPGLTGAHTDCRGTRITAP*GGGVIT
Trigger: GGTGATGACCCCACCTCCTCAGGGAGCTGTTATCCG...AGTGCCTCTACAGTCAGTGTGGGCTCCAGTGAGACCCGGGGTGAGCGTGTTATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320472.9
CDS-3UTR GCA 90 bp GAATCGCACAGCATCAATAACACGCTCACCCCGGGTCTCACTGGAGCCCACACTGAGAATTCGTGGAGCTaGCGGTGGTCCAGGATGCCC +
Preference number: 4 (lower is better)
Translates to: ESHSINNTLTPGLTGAHTENSWS*RWSRMP
Trigger: GGGCATCCTGGACCACCGGCAGCTCCACGAATTCTC...AGTGTGGGCTCCAGTGAGACCCGGGGTGAGCGTGTTATTGATGCTGTGCGATTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320472.9
CDS-3UTR CCA 90 bp TCACTCCCCCTCCTCTTTGATGCGCTGTTGCTTATTGCGGCGAGCATCCATGTCTCCAGGTGGCCGACTTaGCGGTGCTCGACTGCTGGA +
Preference number: 4 (lower is better)
Translates to: SLPLLFDALLLIAASIHVSRWPT*RCSTAG
Trigger: TCCAGCAGTCGAGCACCGCCAAGTCGGCCACCTGGA...GACATGGATGCTCGCCGCAATAAGCAACAGCGCATCAAAGAGGAGGGGGAGTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000320472.9
CDS-3UTR CCA 90 bp GATGAGAAGGGGAGGAGAATTCGTGGAGCTGCCGGTGGTCCAGGATGCCCTTCCTGTAGAGGCACTGCTTaGGGTCCGCAGGAGATGAGA +
Preference number: 4 (lower is better)
Translates to: DEKGRRIRGAAGGPGCPSCRGTA*GPQEMR
Trigger: TCTCATCTCCTGCGGACCCCAAGCAGTGCCTCTACA...GGAAGGGCATCCTGGACCACCGGCAGCTCCACGAATTCTCCTCCCCTTCTCATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320472.9
CDS-3UTR TCA 90 bp CCTTTGAGCAGTTGGGTCTCTGAGCCAAAGTGTCTTCAAGTCCTGTTTATGAGGAGGGCGAGGGCGCCGTaGCGCTGTTCTGCGCGTGGT +
Preference number: 4 (lower is better)
Translates to: PLSSWVSEPKCLQVLFMRRARAP*RCSARG
Trigger: ACCACGCGCAGAACAGCGTCACGGCGCCCTCGCCCT...CCTCATAAACAGGACTTGAAGACACTTTGGCTCAGAGACCCAACTGCTCAAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418709.6
ENST00000437221.5
CDS-3UTR TCA 90 bp TTTAGGGGGCTGGCAGTTAGGAGAGGGATAGGAAGAGCTCACATGGTGAGGCTCAGGGCGTTGCGCTGCTaGGGGTTGATAAGCTGGCTC +
Preference number: 4 (lower is better)
Translates to: FRGLAVRRGIGRAHMVRLRALRC*GLISWL
Trigger: GAGCCAGCTTATCAACCCTCAGCAGCGCAACGCCCT...GAGCCTCACCATGTGAGCTCTTCCTATCCCTCTCCTAACTGCCAGCCCCCTAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000320472.9
CDS-3UTR GCA 90 bp CACACTGACTGTAGAGGCACTGCTTGGGGTCCGCAGGAGATGAGAAGGGGAGGACTCAGGTCCGAGTCCTaGATGCGGATACAGTCCATG +
Preference number: 4 (lower is better)
Translates to: HTDCRGTAWGPQEMRRGGLRSES*MRIQSM
Trigger: CATGGACTGTATCCGCATGCAGGACTCGGACCTGAG...TCCTCCCCTTCTCATCTCCTGCGGACCCCAAGCAGTGCCTCTACAGTCAGTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320472.9
CDS-3UTR GCA 90 bp GTTGAAGTCATTCCACTCATCTCGGGGTGGGAAAGAGATGGTCTGGCGGAGGGTTGGCCGACTTGGCGGTaGTCGACTGCTGGAAGGACA +
Preference number: 4 (lower is better)
Translates to: VEVIPLISGWERDGLAEGWPTWR*STAGRT
Trigger: TGTCCTTCCAGCAGTCGAGCACCGCCAAGTCGGCCA...ACCCTCCGCCAGACCATCTCTTTCCCACCCCGAGATGAGTGGAATGACTTCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320472.9
CDS-3UTR GCA 90 bp GCAGTTAGGAGAGGGATAGGAAGAGCTCACATGGTGAGGCTCACTCCCCCTCCTCGTCGGCCCAGGACTTaGCCATCTCTGGTTTCCAGA +
Preference number: 4 (lower is better)
Translates to: AVRRGIGRAHMVRLTPPPRRPRT*PSLVSR
Trigger: TCTGGAAACCAGAGATGGGCAAGTCCTGGGCCGACG...AGGAGGGGGAGTGAGCCTCACCATGTGAGCTCTTCCTATCCCTCTCCTAACTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000320472.9
CDS-3UTR CCA 90 bp GTTGAAGTCATTCCACTCATCTCGGGGTGGGAAAGAGATGGTCTGGCGGAGGGTCTGGGTAGTCGGTGTTaGAGGGGATGGCGGGTGATG +
Preference number: 4 (lower is better)
Translates to: VEVIPLISGWERDGLAEGLGSRC*RGWRVM
Trigger: CATCACCCGCCATCCCCTCCAACACCGACTACCCAG...ACCCTCCGCCAGACCATCTCTTTCCCACCCCGAGATGAGTGGAATGACTTCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320472.9
CDS-3UTR CCA 90 bp AATCGCACAGCATCAATAACACGCTCACCCCGGGTCTCACTGGAGCCCACACTGGCGGTGCTCGACTGCTaGAAGGACACGTCGAAACTG +
Preference number: 4 (lower is better)
Translates to: NRTASITRSPRVSLEPTLAVLDC*KDTSKL
Trigger: CAGTTTCGACGTGTCCTTCCAGCAGTCGAGCACCGC...CAGTGTGGGCTCCAGTGAGACCCGGGGTGAGCGTGTTATTGATGCTGTGCGATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320472.9
CDS-3UTR CCA 90 bp CGCACAGCATCAATAACACGCTCACCCCGGGTCTCACTGGAGCCCACACTGACTAGTGCCAACCTGGGGTaGCTCATAAGGTACCAGCAC +
Preference number: 4 (lower is better)
Translates to: RTASITRSPRVSLEPTLTSANLG*LIRYQH
Trigger: GTGCTGGTACCTTATGAGCCACCCCAGGTTGGCACT...AGTCAGTGTGGGCTCCAGTGAGACCCGGGGTGAGCGTGTTATTGATGCTGTGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320472.9
CDS-3UTR CCA 90 bp AATCGCACAGCATCAATAACACGCTCACCCCGGGTCTCACTGGAGCCCACACTGAGCTCCCTGAGGAGGTaGGGTCATCACCTTGATCTG +
Preference number: 4 (lower is better)
Translates to: NRTASITRSPRVSLEPTLSSLRR*GHHLDL
Trigger: CAGATCAAGGTGATGACCCCACCTCCTCAGGGAGCT...CAGTGTGGGCTCCAGTGAGACCCGGGGTGAGCGTGTTATTGATGCTGTGCGATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320472.9
CDS-3UTR CCA 90 bp GTTGAAGTCATTCCACTCATCTCGGGGTGGGAAAGAGATGGTCTGGCGGAGGGTCTTCCTGTCTCTTCCTaGGCAAGCACAGATCCGGGC +
Preference number: 4 (lower is better)
Translates to: VEVIPLISGWERDGLAEGLPVSS*ASTDPG
Trigger: GCCCGGATCTGTGCTTGCCCAGGAAGAGACAGGAAG...ACCCTCCGCCAGACCATCTCTTTCCCACCCCGAGATGAGTGGAATGACTTCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320472.9
CDS-3UTR CCA 90 bp GTCAAAGTTGAAGTCATTCCACTCATCTCGGGGTGGGAAAGAGATGGTCTGGCGTCGTGGAGCTGCCGGTaGTCCAGGATGCCCTTCCAG +
Preference number: 4 (lower is better)
Translates to: VKVEVIPLISGWERDGLASWSCR*SRMPFQ
Trigger: CTGGAAGGGCATCCTGGACCACCGGCAGCTCCACGA...CGCCAGACCATCTCTTTCCCACCCCGAGATGAGTGGAATGACTTCAACTTTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320472.9
CDS-3UTR TCA 90 bp AGGGGAGGAGAATTCGTGGAGCTGCCGGTGGTCCAGGATGCCCTTCCAGATCGCTGTCGCACCATCTTCTaGTGGTTCATCCACAAAGTT +
Preference number: 4 (lower is better)
Translates to: RGGEFVELPVVQDALPDRCRTIF*WFIHKV
Trigger: AACTTTGTGGATGAACCATCAGAAGATGGTGCGACA...GCGATCTGGAAGGGCATCCTGGACCACCGGCAGCTCCACGAATTCTCCTCCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320472.9
CDS-3UTR TCA 90 bp GCTTGGATCTCACTTACTCAAAACGTAAGTCTCCTGGCTAAATGCACTGAACAGAGGGCGAGGGCGCCGTaGCGCTGTTCTGCGCGTGGT +
Preference number: 4 (lower is better)
Translates to: AWISLTQNVSLLAKCTEQRARAP*RCSARG
Trigger: ACCACGCGCAGAACAGCGTCACGGCGCCCTCGCCCT...CTGTTCAGTGCATTTAGCCAGGAGACTTACGTTTTGAGTAAGTGAGATCCAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418709.6
ENST00000437221.5
CDS-3UTR GCA 90 bp GTTGAAGTCATTCCACTCATCTCGGGGTGGGAAAGAGATGGTCTGGCGGAGGGTGAATCTGCTGGTCCATaGTGTTCAGGAGCCCCAGGT +
Preference number: 4 (lower is better)
Translates to: VEVIPLISGWERDGLAEGESAGP*CSGAPG
Trigger: ACCTGGGGCTCCTGAACAGCATGGACCAGCAGATTC...ACCCTCCGCCAGACCATCTCTTTCCCACCCCGAGATGAGTGGAATGACTTCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320472.9
CDS-3UTR GCA 90 bp CACACTGACTGTAGAGGCACTGCTTGGGGTCCGCAGGAGATGAGAAGGGGAGGATGGTGCTGCTGCTGTTaGTGTTGCCTGTACGTTTCA +
Preference number: 4 (lower is better)
Translates to: HTDCRGTAWGPQEMRRGGWCCCC*CCLYVS
Trigger: TGAAACGTACAGGCAACAGCAACAGCAGCAGCACCA...TCCTCCCCTTCTCATCTCCTGCGGACCCCAAGCAGTGCCTCTACAGTCAGTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320472.9
CDS-3UTR CCA 90 bp GGGCTGGCAGTTAGGAGAGGGATAGGAAGAGCTCACATGGTGAGGCTCACTCCCGGCAGTACTGTAGGGTaGCACACCGTGAAGTTTCAA +
Preference number: 4 (lower is better)
Translates to: GLAVRRGIGRAHMVRLTPGSTVG*HTVKFQ
Trigger: TTGAAACTTCACGGTGTGCCACCCTACAGTACTGCC...GGGAGTGAGCCTCACCATGTGAGCTCTTCCTATCCCTCTCCTAACTGCCAGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320472.9
CDS-3UTR CCA 90 bp GGTCTGGCGGAGGGTGAATCGCACAGCATCAATAACACGCTCACCCCGGGTCTCCCAAGAGAAATGAGCTaGGGTTTCTACGAAACGCTG +
Preference number: 4 (lower is better)
Translates to: GLAEGESHSINNTLTPGLPREMS*GFYETL
Trigger: CAGCGTTTCGTAGAAACCCCAGCTCATTTCTCTTGG...GAGACCCGGGGTGAGCGTGTTATTGATGCTGTGCGATTCACCCTCCGCCAGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320472.9
CDS-3UTR CCA 90 bp ACAGCATCAATAACACGCTCACCCCGGGTCTCACTGGAGCCCACACTGACTGTATGTACTGTGGCCACATaGGGTCACTCAGGTCCGAGT +
Preference number: 4 (lower is better)
Translates to: TASITRSPRVSLEPTLTVCTVAT*GHSGPS
Trigger: ACTCGGACCTGAGTGACCCCATGTGGCCACAGTACA...TACAGTCAGTGTGGGCTCCAGTGAGACCCGGGGTGAGCGTGTTATTGATGCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320472.9
CDS-3UTR CCA 90 bp GGGCTGGCAGTTAGGAGAGGGATAGGAAGAGCTCACATGGTGAGGCTCACTCCCGTTTCTTCAGTTCAGTaGAATACGTCCAGGTGGCCG +
Preference number: 4 (lower is better)
Translates to: GLAVRRGIGRAHMVRLTPVSSVQ*NTSRWP
Trigger: CGGCCACCTGGACGTATTCCACTGAACTGAAGAAAC...GGGAGTGAGCCTCACCATGTGAGCTCTTCCTATCCCTCTCCTAACTGCCAGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320472.9
CDS-3UTR CCA 90 bp TCACTCCCCCTCCTCTTTGATGCGCTGTTGCTTATTGCGGCGAGCATCCATGTCGGGAAAGAGATGGTCTaGCGGAGGGTGAATCGCACA +
Preference number: 4 (lower is better)
Translates to: SLPLLFDALLLIAASIHVGKEMV*RRVNRT
Trigger: TGTGCGATTCACCCTCCGCCAGACCATCTCTTTCCC...GACATGGATGCTCGCCGCAATAAGCAACAGCGCATCAAAGAGGAGGGGGAGTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000320472.9
CDS-3UTR CCA 90 bp CTCCCCCTCCTCTTTGATGCGCTGTTGCTTATTGCGGCGAGCATCCATGTCAAACCACTCATCTCGGGGTaGGAAAGAGATGGTCTGGCG +
Preference number: 4 (lower is better)
Translates to: LPLLFDALLLIAASIHVKPLISG*ERDGLA
Trigger: CGCCAGACCATCTCTTTCCCACCCCGAGATGAGTGG...TTTGACATGGATGCTCGCCGCAATAAGCAACAGCGCATCAAAGAGGAGGGGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000320472.9
3UTR CAA 72 bp AAGAGCTCACATGGTGAGGCTCACTCCCCCTCCTCTTaGATGCGCTGTTGCTTATTGCGGCGAGCATCCATG +
Preference number: 4 (lower is better)
Translates to: KSSHGEAHSPSS*MRCCLLRRASM
Trigger: CATGGATGCTCGCCGCAATAAGCAACAGCGCATCAAAGAGGAGGGGGAGTGAGCCTCACCATGTGAGCTCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000320472.9
CDS-3UTR TCA 90 bp AGCTCTAGATACCTATCACCATACATGATACCCCTTAAGGGAAGGAGTATAGACAGGGCGAGGGCGCCGTaGCGCTGTTCTGCGCGTGGT +
Preference number: 4 (lower is better)
Translates to: SSRYLSPYMIPLKGRSIDRARAP*RCSARG
Trigger: ACCACGCGCAGAACAGCGTCACGGCGCCCTCGCCCT...GTCTATACTCCTTCCCTTAAGGGGTATCATGTATGGTGATAGGTATCTAGAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264731.8
ENST00000354600.10
CDS-3UTR TCA 90 bp CACTTTCTAGTGGTTTCTATGCTTACTATCCTTTTACCCCTTACCCTGGCTACTAGGGCGAGGGCGCCGTaGCGCTGTTCTGCGCGTGGT +
Preference number: 4 (lower is better)
Translates to: HFLVVSMLTILLPLTLATRARAP*RCSARG
Trigger: ACCACGCGCAGAACAGCGTCACGGCGCCCTCGCCCT...AGTAGCCAGGGTAAGGGGTAAAAGGATAGTAAGCATAGAAACCACTAGAAAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264731.8
ENST00000354600.10
CDS-3UTR TCA 90 bp TTCGTGGAGCTGCCGGTGGTCCAGGATGCCCTTCCAGATCGCATGTCGAAATTGATACCATGTGTGTTCTaGCGAAACGGGCGCTTCGTA +
Preference number: 4 (lower is better)
Translates to: FVELPVVQDALPDRMSKLIPCVF*RNGRFV
Trigger: TACGAAGCGCCCGTTTCGTCAGAACACACATGGTAT...CAATTTCGACATGCGATCTGGAAGGGCATCCTGGACCACCGGCAGCTCCACGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320472.9
CDS-3UTR GCA 90 bp AGGGGAGGAGAATTCGTGGAGCTGCCGGTGGTCCAGGATGCCCTTCCAGATCGCCTGTCCGAAACTTGCTaGTTTCTGATGCTATCTTCA +
Preference number: 4 (lower is better)
Translates to: RGGEFVELPVVQDALPDRLSETC*FLMLSS
Trigger: TGAAGATAGCATCAGAAAGCAGCAAGTTTCGGACAG...GCGATCTGGAAGGGCATCCTGGACCACCGGCAGCTCCACGAATTCTCCTCCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320472.9
CDS-3UTR GCA 90 bp GATGAGAAGGGGAGGAGAATTCGTGGAGCTGCCGGTGGTCCAGGATGCCCTTCCTGCTGCTGTTGCTGTTaGCTGTACGTTTCAATTGTG +
Preference number: 4 (lower is better)
Translates to: DEKGRRIRGAAGGPGCPSCCCCC*LYVSIV
Trigger: CACAATTGAAACGTACAGGCAACAGCAACAGCAGCA...GGAAGGGCATCCTGGACCACCGGCAGCTCCACGAATTCTCCTCCCCTTCTCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320472.9
CDS-3UTR GCA 90 bp TTTAGGGGGCTGGCAGTTAGGAGAGGGATAGGAAGAGCTCACATGGTGAGGCTCAGTAAGTGCTGGTGCTaGTGCTGTTGCTGTTGCCTG +
Preference number: 4 (lower is better)
Translates to: FRGLAVRRGIGRAHMVRLSKCWC*CCCCCL
Trigger: CAGGCAACAGCAACAGCAGCAGCACCAGCACTTACT...GAGCCTCACCATGTGAGCTCTTCCTATCCCTCTCCTAACTGCCAGCCCCCTAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000320472.9
CDS-3UTR CCA 90 bp AATCGCACAGCATCAATAACACGCTCACCCCGGGTCTCACTGGAGCCCACACTGTGTTATAGGGACTGGTaGACGAGGAGCCGTTCTGAA +
Preference number: 4 (lower is better)
Translates to: NRTASITRSPRVSLEPTLCYRDW*TRSRSE
Trigger: TTCAGAACGGCTCCTCGTCCACCAGTCCCTATAACA...CAGTGTGGGCTCCAGTGAGACCCGGGGTGAGCGTGTTATTGATGCTGTGCGATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320472.9
CDS-3UTR CCA 90 bp AATCGCACAGCATCAATAACACGCTCACCCCGGGTCTCACTGGAGCCCACACTGTCTACATACTGGGCATaGCTGTTCCCCTCTACTCGA +
Preference number: 4 (lower is better)
Translates to: NRTASITRSPRVSLEPTLSTYWA*LFPSTR
Trigger: TCGAGTAGAGGGGAACAGCCATGCCCAGTATGTAGA...CAGTGTGGGCTCCAGTGAGACCCGGGGTGAGCGTGTTATTGATGCTGTGCGATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320472.9
CDS-3UTR CCA 90 bp AATCGCACAGCATCAATAACACGCTCACCCCGGGTCTCACTGGAGCCCACACTGGGATCTTCTACATACTaGGCATGGCTGTTCCCCTCT +
Preference number: 4 (lower is better)
Translates to: NRTASITRSPRVSLEPTLGSSTY*AWLFPS
Trigger: AGAGGGGAACAGCCATGCCCAGTATGTAGAAGATCC...CAGTGTGGGCTCCAGTGAGACCCGGGGTGAGCGTGTTATTGATGCTGTGCGATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320472.9
CDS-3UTR CCA 90 bp TCCCTAAGGGAGATGGACGGGAAACTGGGTTCTCACAGTTACTTTCCAACAAACGGGAGGTGGATGGCATaGAGAGTGGGGGAGGGAGTG +
Preference number: 4 (lower is better)
Translates to: SLREMDGKLGSHSYFPTNGRWMA*RVGEGV
Trigger: CACTCCCTCCCCCACTCTCCATGCCATCCACCTCCC...GTTTGTTGGAAAGTAACTGTGAGAACCCAGTTTCCCGTCCATCTCCCTTAGGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264731.8
ENST00000354600.10
CDS-3UTR TCA 90 bp CCTTTGAGCAGTTGGGTCTCTGAGCCAAAGTGTCTTCAAGTCCTGTTTATGAGGCGGATAACAGCTCCCTaGGGAGGTGGGGTCATCACC +
Preference number: 4 (lower is better)
Translates to: PLSSWVSEPKCLQVLFMRRITAP*GGGVIT
Trigger: GGTGATGACCCCACCTCCTCAGGGAGCTGTTATCCG...CCTCATAAACAGGACTTGAAGACACTTTGGCTCAGAGACCCAACTGCTCAAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418709.6
ENST00000437221.5
CDS-3UTR TCA 90 bp CGCACAGCATCAATAACACGCTCACCCCGGGTCTCACTGGAGCCCACACTGACTGTTTCAATTGTGTGCTaGGGAAGGTACTGCATGAGT +
Preference number: 4 (lower is better)
Translates to: RTASITRSPRVSLEPTLTVSIVC*GRYCMS
Trigger: ACTCATGCAGTACCTTCCTCAGCACACAATTGAAAC...AGTCAGTGTGGGCTCCAGTGAGACCCGGGGTGAGCGTGTTATTGATGCTGTGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320472.9
CDS-3UTR TCA 90 bp AGAGGTAGCCTCTTACTTCTCCTTCCCCTAAGAAATCAGACAAGAGGAAGGGGAAGGGCGTTGCGCTGCTaGGGGTTGATAAGCTGGCTC +
Preference number: 4 (lower is better)
Translates to: RGSLLLLLPLRNQTRGRGRALRC*GLISWL
Trigger: GAGCCAGCTTATCAACCCTCAGCAGCGCAACGCCCT...TCCCCTTCCTCTTGTCTGATTTCTTAGGGGAAGGAGAAGTAAGAGGCTACCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000264731.8
ENST00000320472.9
ENST00000354600.10
CDS-3UTR TCA 90 bp AACACGCTCACCCCGGGTCTCACTGGAGCCCACACTGACTGTAGAGGCACTGCTCATCCATGTCAAAGTTaGAGTCATTCCACTCATCTC +
Preference number: 4 (lower is better)
Translates to: NTLTPGLTGAHTDCRGTAHPCQS*SHSTHL
Trigger: GAGATGAGTGGAATGACTTCAACTTTGACATGGATG...AGCAGTGCCTCTACAGTCAGTGTGGGCTCCAGTGAGACCCGGGGTGAGCGTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320472.9
CDS-3UTR GCA 90 bp AGAGGTAGCCTCTTACTTCTCCTTCCCCTAAGAAATCAGACAAGAGGAAGGGGATGGCCGACTTGGCGGTaGTCGACTGCTGGAAGGACA +
Preference number: 4 (lower is better)
Translates to: RGSLLLLLPLRNQTRGRGWPTWR*STAGRT
Trigger: TGTCCTTCCAGCAGTCGAGCACCGCCAAGTCGGCCA...TCCCCTTCCTCTTGTCTGATTTCTTAGGGGAAGGAGAAGTAAGAGGCTACCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264731.8
ENST00000320472.9
ENST00000354600.10
CDS-3UTR GCA 90 bp ACAGTGGTTCCTCACCCACCAATGGCCGGTCTAAGGATACAAAATCTGCAGAAATGGCCGACTTGGCGGTaGTCGACTGCTGGAAGGACA +
Preference number: 4 (lower is better)
Translates to: TVVPHPPMAGLRIQNLQKWPTWR*STAGRT
Trigger: TGTCCTTCCAGCAGTCGAGCACCGCCAAGTCGGCCA...TTTCTGCAGATTTTGTATCCTTAGACCGGCCATTGGTGGGTGAGGAACCACTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418709.6
ENST00000437221.5
CDS-3UTR GCA 90 bp AGAGGTAGCCTCTTACTTCTCCTTCCCCTAAGAAATCAGACAAGAGGAAGGGGAGCCGGTGGTCCAGGATaGCCTTCCAGATCGCATGTC +
Preference number: 4 (lower is better)
Translates to: RGSLLLLLPLRNQTRGRGAGGPG*PSRSHV
Trigger: GACATGCGATCTGGAAGGGCATCCTGGACCACCGGC...TCCCCTTCCTCTTGTCTGATTTCTTAGGGGAAGGAGAAGTAAGAGGCTACCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264731.8
ENST00000320472.9
ENST00000354600.10
CDS-3UTR GCA 90 bp TTCGTGGAGCTGCCGGTGGTCCAGGATGCCCTTCCAGATCGCATGTCGAAATTGAGGGATTTTCAGACTTaGCAGATCTGTTGGCTCCCA +
Preference number: 4 (lower is better)
Translates to: FVELPVVQDALPDRMSKLRDFQT*QICWLP
Trigger: TGGGAGCCAACAGATCTGGCAAGTCTGAAAATCCCT...CAATTTCGACATGCGATCTGGAAGGGCATCCTGGACCACCGGCAGCTCCACGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320472.9
CDS-3UTR CCA 90 bp TCCCTAAGGGAGATGGACGGGAAACTGGGTTCTCACAGTTACTTTCCAACAAACCTGGGTAGTCGGTGTTaGAGGGGATGGCGGGTGATG +
Preference number: 4 (lower is better)
Translates to: SLREMDGKLGSHSYFPTNLGSRC*RGWRVM
Trigger: CATCACCCGCCATCCCCTCCAACACCGACTACCCAG...GTTTGTTGGAAAGTAACTGTGAGAACCCAGTTTCCCGTCCATCTCCCTTAGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264731.8
ENST00000354600.10
CDS-3UTR CCA 90 bp GTAAGAGGTAGCCTCTTACTTCTCCTTCCCCTAAGAAATCAGACAAGAGGAAGGTCCAGGTGGCCGACTTaGCGGTGCTCGACTGCTGGA +
Preference number: 4 (lower is better)
Translates to: VRGSLLLLLPLRNQTRGRSRWPT*RCSTAG
Trigger: TCCAGCAGTCGAGCACCGCCAAGTCGGCCACCTGGA...CCTTCCTCTTGTCTGATTTCTTAGGGGAAGGAGAAGTAAGAGGCTACCTCTTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264731.8
ENST00000320472.9
ENST00000354600.10
CDS-3UTR CCA 90 bp CCTTTGAGCAGTTGGGTCTCTGAGCCAAAGTGTCTTCAAGTCCTGTTTATGAGGGGCTCAGCTCATGGTTaGGGCACCGCTTCACCACCT +
Preference number: 4 (lower is better)
Translates to: PLSSWVSEPKCLQVLFMRGSAHG*GTASPP
Trigger: AGGTGGTGAAGCGGTGCCCCAACCATGAGCTGAGCC...CCTCATAAACAGGACTTGAAGACACTTTGGCTCAGAGACCCAACTGCTCAAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418709.6
ENST00000437221.5
CDS-3UTR CCA 90 bp AGAGGTAGCCTCTTACTTCTCCTTCCCCTAAGAAATCAGACAAGAGGAAGGGGATCACGGCTCAGCTCATaGTTGGGGCACCGCTTCACC +
Preference number: 4 (lower is better)
Translates to: RGSLLLLLPLRNQTRGRGSRLSS*LGHRFT
Trigger: GGTGAAGCGGTGCCCCAACCATGAGCTGAGCCGTGA...TCCCCTTCCTCTTGTCTGATTTCTTAGGGGAAGGAGAAGTAAGAGGCTACCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000264731.8
ENST00000320472.9
ENST00000354600.10
CDS-3UTR CCA 90 bp ATGATCACCTCGCTGCCCAGCAGTACACTTGACACCTTCGTTTCTTACTACTTGTCACGGCTCAGCTCATaGTTGGGGCACCGCTTCACC +
Preference number: 4 (lower is better)
Translates to: MITSLPSSTLDTFVSYYLSRLSS*LGHRFT
Trigger: GGTGAAGCGGTGCCCCAACCATGAGCTGAGCCGTGA...CAAGTAGTAAGAAACGAAGGTGTCAAGTGTACTGCTGGGCAGCGAGGTGATCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418709.6
ENST00000437221.5
CDS-3UTR CCA 90 bp GTAAGAGGTAGCCTCTTACTTCTCCTTCCCCTAAGAAATCAGACAAGAGGAAGGGGGAGGTGGATGGCATaGAGAGTGGGGGAGGGAGTG +
Preference number: 4 (lower is better)
Translates to: VRGSLLLLLPLRNQTRGRGRWMA*RVGEGV
Trigger: CACTCCCTCCCCCACTCTCCATGCCATCCACCTCCC...CCTTCCTCTTGTCTGATTTCTTAGGGGAAGGAGAAGTAAGAGGCTACCTCTTAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000264731.8
ENST00000354600.10
CDS-3UTR CCA 90 bp TCACTCCCCCTCCTCTTTGATGCGCTGTTGCTTATTGCGGCGAGCATCCATGTCACTTGCCAGATCTGTTaGCTCCCATGCCATCAGGAA +
Preference number: 4 (lower is better)
Translates to: SLPLLFDALLLIAASIHVTCQIC*LPCHQE
Trigger: TTCCTGATGGCATGGGAGCCAACAGATCTGGCAAGT...GACATGGATGCTCGCCGCAATAAGCAACAGCGCATCAAAGAGGAGGGGGAGTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000320472.9
CDS-3UTR TCA 90 bp CTCTTTGATGCGCTGTTGCTTATTGCGGCGAGCATCCATGTCAAAGTTGAAGTCGACGAGGAGCCGTTCTaGATCTGCTGGTCCATGCTG +
Preference number: 4 (lower is better)
Translates to: LFDALLLIAASIHVKVEVDEEPF*ICWSML
Trigger: CAGCATGGACCAGCAGATTCAGAACGGCTCCTCGTC...GACTTCAACTTTGACATGGATGCTCGCCGCAATAAGCAACAGCGCATCAAAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320472.9
CDS-3UTR TCA 90 bp CCTTTGAGCAGTTGGGTCTCTGAGCCAAAGTGTCTTCAAGTCCTGTTTATGAGGGACGAGGAGCCGTTCTaGATCTGCTGGTCCATGCTG +
Preference number: 4 (lower is better)
Translates to: PLSSWVSEPKCLQVLFMRDEEPF*ICWSML
Trigger: CAGCATGGACCAGCAGATTCAGAACGGCTCCTCGTC...CCTCATAAACAGGACTTGAAGACACTTTGGCTCAGAGACCCAACTGCTCAAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418709.6
ENST00000437221.5
CDS-3UTR TCA 90 bp GTAAGAGGTAGCCTCTTACTTCTCCTTCCCCTAAGAAATCAGACAAGAGGAAGGCGGATAACAGCTCCCTaGGGAGGTGGGGTCATCACC +
Preference number: 4 (lower is better)
Translates to: VRGSLLLLLPLRNQTRGRRITAP*GGGVIT
Trigger: GGTGATGACCCCACCTCCTCAGGGAGCTGTTATCCG...CCTTCCTCTTGTCTGATTTCTTAGGGGAAGGAGAAGTAAGAGGCTACCTCTTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264731.8
ENST00000320472.9
ENST00000354600.10
CDS-3UTR TCA 90 bp GGTCTGGCGGAGGGTGAATCGCACAGCATCAATAACACGCTCACCCCGGGTCTCAACTGCTGTTACACATaGAATTGTACAAGACTGTCG +
Preference number: 4 (lower is better)
Translates to: GLAEGESHSINNTLTPGLNCCYT*NCTRLS
Trigger: CGACAGTCTTGTACAATTTCATGTGTAACAGCAGTT...GAGACCCGGGGTGAGCGTGTTATTGATGCTGTGCGATTCACCCTCCGCCAGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320472.9
CDS-3UTR TCA 90 bp AATAACACGCTCACCCCGGGTCTCACTGGAGCCCACACTGACTGTAGAGGCACTGGGATCTTCGTTTCTTaGTGGATGTCATCTGGATAC +
Preference number: 4 (lower is better)
Translates to: NNTLTPGLTGAHTDCRGTGIFVS*WMSSGY
Trigger: GTATCCAGATGACATCCATCAAGAAACGAAGATCCC...AGTGCCTCTACAGTCAGTGTGGGCTCCAGTGAGACCCGGGGTGAGCGTGTTATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320472.9
CDS-3UTR TCA 90 bp GTAAGAGGTAGCCTCTTACTTCTCCTTCCCCTAAGAAATCAGACAAGAGGAAGGGTGCCTGGGTGGGGCTaGGTCCATTCATGTCTCCAG +
Preference number: 4 (lower is better)
Translates to: VRGSLLLLLPLRNQTRGRVPGWG*VHSCLQ
Trigger: CTGGAGACATGAATGGACTCAGCCCCACCCAGGCAC...CCTTCCTCTTGTCTGATTTCTTAGGGGAAGGAGAAGTAAGAGGCTACCTCTTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264731.8
ENST00000354600.10
CDS-3UTR TCA 90 bp TTGCTTATTGCGGCGAGCATCCATGTCAAAGTTGAAGTCATTCCACTCATCTCGGAAGAGCTCACATGGTaGGGCTCACTCCCCCTCCTC +
Preference number: 4 (lower is better)
Translates to: LLIAASIHVKVEVIPLISEELTW*GSLPLL
Trigger: GAGGAGGGGGAGTGAGCCTCACCATGTGAGCTCTTC...CGAGATGAGTGGAATGACTTCAACTTTGACATGGATGCTCGCCGCAATAAGCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000320472.9
CDS-3UTR GCA 90 bp TCCCTAAGGGAGATGGACGGGAAACTGGGTTCTCACAGTTACTTTCCAACAAACCGTCGGCCCAGGACTTaGCCATCTCTGGTTTCCAGA +
Preference number: 4 (lower is better)
Translates to: SLREMDGKLGSHSYFPTNRRPRT*PSLVSR
Trigger: TCTGGAAACCAGAGATGGGCAAGTCCTGGGCCGACG...GTTTGTTGGAAAGTAACTGTGAGAACCCAGTTTCCCGTCCATCTCCCTTAGGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264731.8
ENST00000354600.10
CDS-3UTR GCA 90 bp ATGATCACCTCGCTGCCCAGCAGTACACTTGACACCTTCGTTTCTTACTACTTGCGTCGGCCCAGGACTTaGCCATCTCTGGTTTCCAGA +
Preference number: 4 (lower is better)
Translates to: MITSLPSSTLDTFVSYYLRRPRT*PSLVSR
Trigger: TCTGGAAACCAGAGATGGGCAAGTCCTGGGCCGACG...CAAGTAGTAAGAAACGAAGGTGTCAAGTGTACTGCTGGGCAGCGAGGTGATCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418709.6
ENST00000437221.5
CDS-3UTR CCA 90 bp CGCACAGCATCAATAACACGCTCACCCCGGGTCTCACTGGAGCCCACACTGACTTGCTCTGGGACATGGTaGATCGGTAATAACTTTCTT +
Preference number: 4 (lower is better)
Translates to: RTASITRSPRVSLEPTLTCSGTW*IGNNFL
Trigger: AAGAAAGTTATTACCGATCCACCATGTCCCAGAGCA...AGTCAGTGTGGGCTCCAGTGAGACCCGGGGTGAGCGTGTTATTGATGCTGTGCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320472.9
CDS-3UTR CCA 90 bp CATGTCAAAGTTGAAGTCATTCCACTCATCTCGGGGTGGGAAAGAGATGGTCTGAGAGAGCATCGAAGGTaGAGCTGGGCTGTGCGTAGG +
Preference number: 4 (lower is better)
Translates to: HVKVEVIPLISGWERDGLREHRR*SWAVRR
Trigger: CCTACGCACAGCCCAGCTCCACCTTCGATGCTCTCT...CAGACCATCTCTTTCCCACCCCGAGATGAGTGGAATGACTTCAACTTTGACATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320472.9
CDS-3UTR CCA 90 bp ATGATCACCTCGCTGCCCAGCAGTACACTTGACACCTTCGTTTCTTACTACTTGAGAGAGCATCGAAGGTaGAGCTGGGCTGTGCGTAGG +
Preference number: 4 (lower is better)
Translates to: MITSLPSSTLDTFVSYYLREHRR*SWAVRR
Trigger: CCTACGCACAGCCCAGCTCCACCTTCGATGCTCTCT...CAAGTAGTAAGAAACGAAGGTGTCAAGTGTACTGCTGGGCAGCGAGGTGATCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418709.6
ENST00000437221.5
CDS-3UTR CCA 90 bp CCTTTGAGCAGTTGGGTCTCTGAGCCAAAGTGTCTTCAAGTCCTGTTTATGAGGGCGGTGCTCGACTGCTaGAAGGACACGTCGAAACTG +
Preference number: 4 (lower is better)
Translates to: PLSSWVSEPKCLQVLFMRAVLDC*KDTSKL
Trigger: CAGTTTCGACGTGTCCTTCCAGCAGTCGAGCACCGC...CCTCATAAACAGGACTTGAAGACACTTTGGCTCAGAGACCCAACTGCTCAAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418709.6
ENST00000437221.5
CDS-3UTR CCA 90 bp GCTTGGATCTCACTTACTCAAAACGTAAGTCTCCTGGCTAAATGCACTGAACAGTCCAGGTGGCCGACTTaGCGGTGCTCGACTGCTGGA +
Preference number: 4 (lower is better)
Translates to: AWISLTQNVSLLAKCTEQSRWPT*RCSTAG
Trigger: TCCAGCAGTCGAGCACCGCCAAGTCGGCCACCTGGA...CTGTTCAGTGCATTTAGCCAGGAGACTTACGTTTTGAGTAAGTGAGATCCAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418709.6
ENST00000437221.5
CDS-3UTR CCA 90 bp CCAACATACAGTGGCAGAGGCAGGTACACAGCATTAAGAAATGTTCTACCTACATCCAGGTGGCCGACTTaGCGGTGCTCGACTGCTGGA +
Preference number: 4 (lower is better)
Translates to: PTYSGRGRYTALRNVLPTSRWPT*RCSTAG
Trigger: TCCAGCAGTCGAGCACCGCCAAGTCGGCCACCTGGA...TGTAGGTAGAACATTTCTTAATGCTGTGTACCTGCCTCTGCCACTGTATGTTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418709.6
ENST00000437221.5
CDS-3UTR CCA 90 bp GTAAGAGGTAGCCTCTTACTTCTCCTTCCCCTAAGAAATCAGACAAGAGGAAGGTGGAATACGTCCAGGTaGCCGACTTGGCGGTGCTCG +
Preference number: 4 (lower is better)
Translates to: VRGSLLLLLPLRNQTRGRWNTSR*PTWRCS
Trigger: CGAGCACCGCCAAGTCGGCCACCTGGACGTATTCCA...CCTTCCTCTTGTCTGATTTCTTAGGGGAAGGAGAAGTAAGAGGCTACCTCTTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264731.8
ENST00000320472.9
ENST00000354600.10
CDS-3UTR CCA 90 bp GTAAGAGGTAGCCTCTTACTTCTCCTTCCCCTAAGAAATCAGACAAGAGGAAGGTCACGGCTCAGCTCATaGTTGGGGCACCGCTTCACC +
Preference number: 4 (lower is better)
Translates to: VRGSLLLLLPLRNQTRGRSRLSS*LGHRFT
Trigger: GGTGAAGCGGTGCCCCAACCATGAGCTGAGCCGTGA...CCTTCCTCTTGTCTGATTTCTTAGGGGAAGGAGAAGTAAGAGGCTACCTCTTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264731.8
ENST00000320472.9
ENST00000354600.10
CDS-3UTR CCA 90 bp TCCCTAAGGGAGATGGACGGGAAACTGGGTTCTCACAGTTACTTTCCAACAAACCTTCCTGTCTCTTCCTaGGCAAGCACAGATCCGGGC +
Preference number: 4 (lower is better)
Translates to: SLREMDGKLGSHSYFPTNLPVSS*ASTDPG
Trigger: GCCCGGATCTGTGCTTGCCCAGGAAGAGACAGGAAG...GTTTGTTGGAAAGTAACTGTGAGAACCCAGTTTCCCGTCCATCTCCCTTAGGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264731.8
ENST00000354600.10
CDS-3UTR TCA 90 bp AAGTGTCTTCAAGTCCTGTTTATGAGGGCTAGATACACACGCACACACATACACCGGATAACAGCTCCCTaGGGAGGTGGGGTCATCACC +
Preference number: 4 (lower is better)
Translates to: KCLQVLFMRARYTRTHIHRITAP*GGGVIT
Trigger: GGTGATGACCCCACCTCCTCAGGGAGCTGTTATCCG...GTGTATGTGTGTGCGTGTGTATCTAGCCCTCATAAACAGGACTTGAAGACACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418709.6
ENST00000437221.5
CDS-3UTR TCA 90 bp CTTATTGCGGCGAGCATCCATGTCAAAGTTGAAGTCATTCCACTCATCTCGGGGACTCCCCCTCCTCTTTaGTGCGCTGTTGCTTATTGC +
Preference number: 4 (lower is better)
Translates to: LIAASIHVKVEVIPLISGTPPPL*CAVAYC
Trigger: GCAATAAGCAACAGCGCATCAAAGAGGAGGGGGAGT...CCCCGAGATGAGTGGAATGACTTCAACTTTGACATGGATGCTCGCCGCAATAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000320472.9
CDS-3UTR TCA 90 bp GAAAGAGATGGTCTGGCGGAGGGTGAATCGCACAGCATCAATAACACGCTCACCCTAGGGAGAAGGCTTTaGAGATTAAGCAGGAGTGCT +
Preference number: 4 (lower is better)
Translates to: ERDGLAEGESHSINNTLTLGRRL*RLSRSA
Trigger: AGCACTCCTGCTTAATCTTCAAAGCCTTCTCCCTAG...GGTGAGCGTGTTATTGATGCTGTGCGATTCACCCTCCGCCAGACCATCTCTTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320472.9
CDS-3UTR TCA 90 bp ATGATCACCTCGCTGCCCAGCAGTACACTTGACACCTTCGTTTCTTACTACTTGGCTCTATGGGTACACTaGTCGGTTTGGGGGCTTGGA +
Preference number: 4 (lower is better)
Translates to: MITSLPSSTLDTFVSYYLALWVH*SVWGLG
Trigger: TCCAAGCCCCCAAACCGATCAGTGTACCCATAGAGC...CAAGTAGTAAGAAACGAAGGTGTCAAGTGTACTGCTGGGCAGCGAGGTGATCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000418709.6
ENST00000437221.5
CDS-3UTR GCA 90 bp AGAGGTAGCCTCTTACTTCTCCTTCCCCTAAGAAATCAGACAAGAGGAAGGGGACTCAGGTCCGAGTCCTaGATGCGGATACAGTCCATG +
Preference number: 4 (lower is better)
Translates to: RGSLLLLLPLRNQTRGRGLRSES*MRIQSM
Trigger: CATGGACTGTATCCGCATGCAGGACTCGGACCTGAG...TCCCCTTCCTCTTGTCTGATTTCTTAGGGGAAGGAGAAGTAAGAGGCTACCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264731.8
ENST00000320472.9
CDS-3UTR GCA 90 bp AGAGGTAGCCTCTTACTTCTCCTTCCCCTAAGAAATCAGACAAGAGGAAGGGGAGAATCTGCTGGTCCATaGTGTTCAGGAGCCCCAGGT +
Preference number: 4 (lower is better)
Translates to: RGSLLLLLPLRNQTRGRGESAGP*CSGAPG
Trigger: ACCTGGGGCTCCTGAACAGCATGGACCAGCAGATTC...TCCCCTTCCTCTTGTCTGATTTCTTAGGGGAAGGAGAAGTAAGAGGCTACCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000264731.8
ENST00000320472.9
ENST00000354600.10
CDS-3UTR GCA 90 bp AGAGGTAGCCTCTTACTTCTCCTTCCCCTAAGAAATCAGACAAGAGGAAGGGGATTGGCGGTGCTCGACTaGTGGAAGGACACGTCGAAA +
Preference number: 4 (lower is better)
Translates to: RGSLLLLLPLRNQTRGRGLAVLD*WKDTSK
Trigger: TTTCGACGTGTCCTTCCAGCAGTCGAGCACCGCCAA...TCCCCTTCCTCTTGTCTGATTTCTTAGGGGAAGGAGAAGTAAGAGGCTACCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264731.8
ENST00000320472.9
ENST00000354600.10
CDS-3UTR CCA 90 bp GTAAGAGGTAGCCTCTTACTTCTCCTTCCCCTAAGAAATCAGACAAGAGGAAGGAGAGAGCATCGAAGGTaGAGCTGGGCTGTGCGTAGG +
Preference number: 4 (lower is better)
Translates to: VRGSLLLLLPLRNQTRGRREHRR*SWAVRR
Trigger: CCTACGCACAGCCCAGCTCCACCTTCGATGCTCTCT...CCTTCCTCTTGTCTGATTTCTTAGGGGAAGGAGAAGTAAGAGGCTACCTCTTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264731.8
ENST00000320472.9
ENST00000354600.10
CDS-3UTR CCA 90 bp GCTTGGATCTCACTTACTCAAAACGTAAGTCTCCTGGCTAAATGCACTGAACAGCTGGGTAGTCGGTGTTaGAGGGGATGGCGGGTGATG +
Preference number: 4 (lower is better)
Translates to: AWISLTQNVSLLAKCTEQLGSRC*RGWRVM
Trigger: CATCACCCGCCATCCCCTCCAACACCGACTACCCAG...CTGTTCAGTGCATTTAGCCAGGAGACTTACGTTTTGAGTAAGTGAGATCCAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418709.6
ENST00000437221.5
CDS-3UTR CCA 90 bp GTAAGAGGTAGCCTCTTACTTCTCCTTCCCCTAAGAAATCAGACAAGAGGAAGGGCGGTGCTCGACTGCTaGAAGGACACGTCGAAACTG +
Preference number: 4 (lower is better)
Translates to: VRGSLLLLLPLRNQTRGRAVLDC*KDTSKL
Trigger: CAGTTTCGACGTGTCCTTCCAGCAGTCGAGCACCGC...CCTTCCTCTTGTCTGATTTCTTAGGGGAAGGAGAAGTAAGAGGCTACCTCTTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264731.8
ENST00000320472.9
ENST00000354600.10
CDS-3UTR CCA 90 bp AAGTGTCTTCAAGTCCTGTTTATGAGGGCTAGATACACACGCACACACATACACTGGAATACGTCCAGGTaGCCGACTTGGCGGTGCTCG +
Preference number: 4 (lower is better)
Translates to: KCLQVLFMRARYTRTHIHWNTSR*PTWRCS
Trigger: CGAGCACCGCCAAGTCGGCCACCTGGACGTATTCCA...GTGTATGTGTGTGCGTGTGTATCTAGCCCTCATAAACAGGACTTGAAGACACTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418709.6
ENST00000437221.5
CDS-3UTR CCA 90 bp GCTTGGATCTCACTTACTCAAAACGTAAGTCTCCTGGCTAAATGCACTGAACAGTGGAATACGTCCAGGTaGCCGACTTGGCGGTGCTCG +
Preference number: 4 (lower is better)
Translates to: AWISLTQNVSLLAKCTEQWNTSR*PTWRCS
Trigger: CGAGCACCGCCAAGTCGGCCACCTGGACGTATTCCA...CTGTTCAGTGCATTTAGCCAGGAGACTTACGTTTTGAGTAAGTGAGATCCAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418709.6
ENST00000437221.5
CDS-3UTR CCA 90 bp CCTTTGAGCAGTTGGGTCTCTGAGCCAAAGTGTCTTCAAGTCCTGTTTATGAGGAGCTCCCTGAGGAGGTaGGGTCATCACCTTGATCTG +
Preference number: 4 (lower is better)
Translates to: PLSSWVSEPKCLQVLFMRSSLRR*GHHLDL
Trigger: CAGATCAAGGTGATGACCCCACCTCCTCAGGGAGCT...CCTCATAAACAGGACTTGAAGACACTTTGGCTCAGAGACCCAACTGCTCAAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418709.6
ENST00000437221.5
CDS-3UTR CCA 90 bp CCAACATACAGTGGCAGAGGCAGGTACACAGCATTAAGAAATGTTCTACCTACAGGCTCAGCTCATGGTTaGGGCACCGCTTCACCACCT +
Preference number: 4 (lower is better)
Translates to: PTYSGRGRYTALRNVLPTGSAHG*GTASPP
Trigger: AGGTGGTGAAGCGGTGCCCCAACCATGAGCTGAGCC...TGTAGGTAGAACATTTCTTAATGCTGTGTACCTGCCTCTGCCACTGTATGTTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418709.6
ENST00000437221.5
CDS-3UTR CCA 90 bp CCAACATACAGTGGCAGAGGCAGGTACACAGCATTAAGAAATGTTCTACCTACATCACGGCTCAGCTCATaGTTGGGGCACCGCTTCACC +
Preference number: 4 (lower is better)
Translates to: PTYSGRGRYTALRNVLPTSRLSS*LGHRFT
Trigger: GGTGAAGCGGTGCCCCAACCATGAGCTGAGCCGTGA...TGTAGGTAGAACATTTCTTAATGCTGTGTACCTGCCTCTGCCACTGTATGTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418709.6
ENST00000437221.5
CDS-3UTR CCA 90 bp ATGATCACCTCGCTGCCCAGCAGTACACTTGACACCTTCGTTTCTTACTACTTGAGTGCCAACCTGGGGTaGCTCATAAGGTACCAGCAC +
Preference number: 4 (lower is better)
Translates to: MITSLPSSTLDTFVSYYLSANLG*LIRYQH
Trigger: GTGCTGGTACCTTATGAGCCACCCCAGGTTGGCACT...CAAGTAGTAAGAAACGAAGGTGTCAAGTGTACTGCTGGGCAGCGAGGTGATCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418709.6
ENST00000437221.5
CDS-3UTR CCA 90 bp TTCTTCCCCTTAATGGGTTTGCAAAGCTGCATGCTTGTTGCAGAAGTTTACAGTTCGTGGAGCTGCCGGTaGTCCAGGATGCCCTTCCAG +
Preference number: 4 (lower is better)
Translates to: FFPLMGLQSCMLVAEVYSSWSCR*SRMPFQ
Trigger: CTGGAAGGGCATCCTGGACCACCGGCAGCTCCACGA...ACTGTAAACTTCTGCAACAAGCATGCAGCTTTGCAAACCCATTAAGGGGAAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264731.8
ENST00000354600.10
CDS-3UTR CCA 90 bp AGCTCTAGATACCTATCACCATACATGATACCCCTTAAGGGAAGGAGTATAGACTCGTGGAGCTGCCGGTaGTCCAGGATGCCCTTCCAG +
Preference number: 4 (lower is better)
Translates to: SSRYLSPYMIPLKGRSIDSWSCR*SRMPFQ
Trigger: CTGGAAGGGCATCCTGGACCACCGGCAGCTCCACGA...GTCTATACTCCTTCCCTTAAGGGGTATCATGTATGGTGATAGGTATCTAGAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264731.8
ENST00000354600.10
CDS-3UTR CCA 90 bp TTCTTCCCCTTAATGGGTTTGCAAAGCTGCATGCTTGTTGCAGAAGTTTACAGTGGGGAGGAGAATTCGTaGAGCTGCCGGTGGTCCAGG +
Preference number: 4 (lower is better)
Translates to: FFPLMGLQSCMLVAEVYSGEENS*SCRWSR
Trigger: CCTGGACCACCGGCAGCTCCACGAATTCTCCTCCCC...ACTGTAAACTTCTGCAACAAGCATGCAGCTTTGCAAACCCATTAAGGGGAAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264731.8
ENST00000354600.10
CDS-3UTR CCA 90 bp TCCCTAAGGGAGATGGACGGGAAACTGGGTTCTCACAGTTACTTTCCAACAAACTGTAGAGGCACTGCTTaGGGTCCGCAGGAGATGAGA +
Preference number: 4 (lower is better)
Translates to: SLREMDGKLGSHSYFPTNCRGTA*GPQEMR
Trigger: TCTCATCTCCTGCGGACCCCAAGCAGTGCCTCTACA...GTTTGTTGGAAAGTAACTGTGAGAACCCAGTTTCCCGTCCATCTCCCTTAGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264731.8
ENST00000354600.10
CDS-3UTR CCA 90 bp AGAGGTAGCCTCTTACTTCTCCTTCCCCTAAGAAATCAGACAAGAGGAAGGGGAGGGAAAGAGATGGTCTaGCGGAGGGTGAATCGCACA +
Preference number: 4 (lower is better)
Translates to: RGSLLLLLPLRNQTRGRGGKEMV*RRVNRT
Trigger: TGTGCGATTCACCCTCCGCCAGACCATCTCTTTCCC...TCCCCTTCCTCTTGTCTGATTTCTTAGGGGAAGGAGAAGTAAGAGGCTACCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264731.8
ENST00000320472.9
ENST00000354600.10
3UTR CAA 72 bp CGCTGTTGCTTATTGCGGCGAGCATCCATGTCAAAGTaGAAGTCATTCCACTCATCTCGGGGTGGGAAAGAG +
Preference number: 4 (lower is better)
Translates to: RCCLLRRASMSK*KSFHSSRGGKE
Trigger: CTCTTTCCCACCCCGAGATGAGTGGAATGACTTCAACTTTGACATGGATGCTCGCCGCAATAAGCAACAGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320472.9
3UTR CAA 72 bp GCTCACTCCCCCTCCTCTTTGATGCGCTGTTGCTTATaGCGGCGAGCATCCATGTCAAAGTTGAAGTCATTC +
Preference number: 4 (lower is better)
Translates to: AHSPSSLMRCCL*RRASMSKLKSF
Trigger: GAATGACTTCAACTTTGACATGGATGCTCGCCGCAATAAGCAACAGCGCATCAAAGAGGAGGGGGAGTGAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000320472.9
CDS-3UTR TCA 90 bp TTTAGGGGGCTGGCAGTTAGGAGAGGGATAGGAAGAGCTCACATGGTGAGGCTCTTCAAGTCAATGGGCTaGACTGAACATATAGGCTGT +
Preference number: 4 (lower is better)
Translates to: FRGLAVRRGIGRAHMVRLFKSMG*TEHIGC
Trigger: ACAGCCTATATGTTCAGTTCAGCCCATTGACTTGAA...GAGCCTCACCATGTGAGCTCTTCCTATCCCTCTCCTAACTGCCAGCCCCCTAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000320472.9
CDS-3UTR TCA 90 bp TTCTTCCCCTTAATGGGTTTGCAAAGCTGCATGCTTGTTGCAGAAGTTTACAGTAGGGCGTTGCGCTGCTaGGGGTTGATAAGCTGGCTC +
Preference number: 4 (lower is better)
Translates to: FFPLMGLQSCMLVAEVYSRALRC*GLISWL
Trigger: GAGCCAGCTTATCAACCCTCAGCAGCGCAACGCCCT...ACTGTAAACTTCTGCAACAAGCATGCAGCTTTGCAAACCCATTAAGGGGAAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264731.8
ENST00000354600.10
CDS-3UTR TCA 90 bp CACTTTCTAGTGGTTTCTATGCTTACTATCCTTTTACCCCTTACCCTGGCTACTGTGCCTGGGTGGGGCTaGGTCCATTCATGTCTCCAG +
Preference number: 4 (lower is better)
Translates to: HFLVVSMLTILLPLTLATVPGWG*VHSCLQ
Trigger: CTGGAGACATGAATGGACTCAGCCCCACCCAGGCAC...AGTAGCCAGGGTAAGGGGTAAAAGGATAGTAAGCATAGAAACCACTAGAAAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000264731.8
ENST00000354600.10
CDS-3UTR TCA 90 bp AGAGGTAGCCTCTTACTTCTCCTTCCCCTAAGAAATCAGACAAGAGGAAGGGGATCAGCCCCTGGGTCGTaGAATAGTCCAGACATGATG +
Preference number: 4 (lower is better)
Translates to: RGSLLLLLPLRNQTRGRGSAPGS*NSPDMM
Trigger: CATCATGTCTGGACTATTTCACGACCCAGGGGCTGA...TCCCCTTCCTCTTGTCTGATTTCTTAGGGGAAGGAGAAGTAAGAGGCTACCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000264731.8
ENST00000354600.10
CDS-3UTR TCA 90 bp TCCCTAAGGGAGATGGACGGGAAACTGGGTTCTCACAGTTACTTTCCAACAAACACTCCCCCTCCTCTTTaGTGCGCTGTTGCTTATTGC +
Preference number: 4 (lower is better)
Translates to: SLREMDGKLGSHSYFPTNTPPPL*CAVAYC
Trigger: GCAATAAGCAACAGCGCATCAAAGAGGAGGGGGAGT...GTTTGTTGGAAAGTAACTGTGAGAACCCAGTTTCCCGTCCATCTCCCTTAGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264731.8
ENST00000354600.10
CDS-3UTR TCA 90 bp TTCTTCCCCTTAATGGGTTTGCAAAGCTGCATGCTTGTTGCAGAAGTTTACAGTGAAGAGCTCACATGGTaGGGCTCACTCCCCCTCCTC +
Preference number: 4 (lower is better)
Translates to: FFPLMGLQSCMLVAEVYSEELTW*GSLPLL
Trigger: GAGGAGGGGGAGTGAGCCTCACCATGTGAGCTCTTC...ACTGTAAACTTCTGCAACAAGCATGCAGCTTTGCAAACCCATTAAGGGGAAGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264731.8
ENST00000354600.10
CDS-3UTR TCA 90 bp GTAAGAGGTAGCCTCTTACTTCTCCTTCCCCTAAGAAATCAGACAAGAGGAAGGGACGTCGGGTGTTTTTaGACTGGCTGCTATGGGCCT +
Preference number: 4 (lower is better)
Translates to: VRGSLLLLLPLRNQTRGRDVGCF*TGCYGP
Trigger: AGGCCCATAGCAGCCAGTTCAAAAACACCCGACGTC...CCTTCCTCTTGTCTGATTTCTTAGGGGAAGGAGAAGTAAGAGGCTACCTCTTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264731.8
ENST00000354600.10
CDS-3UTR GCA 90 bp ACAGCATCAATAACACGCTCACCCCGGGTCTCACTGGAGCCCACACTGACTGTAAGAAAATCCCAGATATaGTGGAAAACCTCTGGACTG +
Preference number: 4 (lower is better)
Translates to: TASITRSPRVSLEPTLTVRKSQI*WKTSGL
Trigger: CAGTCCAGAGGTTTTCCAGCATATCTGGGATTTTCT...TACAGTCAGTGTGGGCTCCAGTGAGACCCGGGGTGAGCGTGTTATTGATGCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000320472.9
CDS-3UTR GCA 90 bp GTAAGAGGTAGCCTCTTACTTCTCCTTCCCCTAAGAAATCAGACAAGAGGAAGGTTGGCGGTGCTCGACTaGTGGAAGGACACGTCGAAA +
Preference number: 4 (lower is better)
Translates to: VRGSLLLLLPLRNQTRGRLAVLD*WKDTSK
Trigger: TTTCGACGTGTCCTTCCAGCAGTCGAGCACCGCCAA...CCTTCCTCTTGTCTGATTTCTTAGGGGAAGGAGAAGTAAGAGGCTACCTCTTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264731.8
ENST00000320472.9
ENST00000354600.10
CDS-3UTR GCA 90 bp CGCTGCCCAGCAGTACACTTGACACCTTCGTTTCTTACTACTTGCAATATTATTTGGCCGACTTGGCGGTaGTCGACTGCTGGAAGGACA +
Preference number: 4 (lower is better)
Translates to: RCPAVHLTPSFLTTCNIIWPTWR*STAGRT
Trigger: TGTCCTTCCAGCAGTCGAGCACCGCCAAGTCGGCCA...AATAATATTGCAAGTAGTAAGAAACGAAGGTGTCAAGTGTACTGCTGGGCAGCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418709.6
ENST00000437221.5
CDS-3UTR GCA 90 bp TTTAGGGGGCTGGCAGTTAGGAGAGGGATAGGAAGAGCTCACATGGTGAGGCTCGTACTGTCCGAAACTTaGTGCTTTCTGATGCTATCT +
Preference number: 4 (lower is better)
Translates to: FRGLAVRRGIGRAHMVRLVLSET*CFLMLS
Trigger: AGATAGCATCAGAAAGCAGCAAGTTTCGGACAGTAC...GAGCCTCACCATGTGAGCTCTTCCTATCCCTCTCCTAACTGCCAGCCCCCTAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000320472.9
CDS-3UTR GCA 90 bp TCCCTAAGGGAGATGGACGGGAAACTGGGTTCTCACAGTTACTTTCCAACAAACAAGTGCTGGTGCTGCTaGTGTTGCTGTTGCCTGTAC +
Preference number: 4 (lower is better)
Translates to: SLREMDGKLGSHSYFPTNKCWCC*CCCCLY
Trigger: GTACAGGCAACAGCAACAGCAGCAGCACCAGCACTT...GTTTGTTGGAAAGTAACTGTGAGAACCCAGTTTCCCGTCCATCTCCCTTAGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264731.8
ENST00000354600.10
CDS-3UTR GCA 90 bp AGAGGTAGCCTCTTACTTCTCCTTCCCCTAAGAAATCAGACAAGAGGAAGGGGAAAGTGCTGGTGCTGCTaGTGTTGCTGTTGCCTGTAC +
Preference number: 4 (lower is better)
Translates to: RGSLLLLLPLRNQTRGRGKCWCC*CCCCLY
Trigger: GTACAGGCAACAGCAACAGCAGCAGCACCAGCACTT...TCCCCTTCCTCTTGTCTGATTTCTTAGGGGAAGGAGAAGTAAGAGGCTACCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264731.8
ENST00000320472.9
ENST00000354600.10
CDS-3UTR GCA 90 bp TCCCTAAGGGAGATGGACGGGAAACTGGGTTCTCACAGTTACTTTCCAACAAACAGTAAGTGCTGGTGCTaGTGCTGTTGCTGTTGCCTG +
Preference number: 4 (lower is better)
Translates to: SLREMDGKLGSHSYFPTNSKCWC*CCCCCL
Trigger: CAGGCAACAGCAACAGCAGCAGCACCAGCACTTACT...GTTTGTTGGAAAGTAACTGTGAGAACCCAGTTTCCCGTCCATCTCCCTTAGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264731.8
ENST00000354600.10
CDS-3UTR GCA 90 bp ACAGTGGTTCCTCACCCACCAATGGCCGGTCTAAGGATACAAAATCTGCAGAAAAGTAAGTGCTGGTGCTaGTGCTGTTGCTGTTGCCTG +
Preference number: 4 (lower is better)
Translates to: TVVPHPPMAGLRIQNLQKSKCWC*CCCCCL
Trigger: CAGGCAACAGCAACAGCAGCAGCACCAGCACTTACT...TTTCTGCAGATTTTGTATCCTTAGACCGGCCATTGGTGGGTGAGGAACCACTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418709.6
ENST00000437221.5
CDS-3UTR GCA 90 bp CACTTTCTAGTGGTTTCTATGCTTACTATCCTTTTACCCCTTACCCTGGCTACTGCCGGTGGTCCAGGATaGCCTTCCAGATCGCATGTC +
Preference number: 4 (lower is better)
Translates to: HFLVVSMLTILLPLTLATAGGPG*PSRSHV
Trigger: GACATGCGATCTGGAAGGGCATCCTGGACCACCGGC...AGTAGCCAGGGTAAGGGGTAAAAGGATAGTAAGCATAGAAACCACTAGAAAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264731.8
ENST00000354600.10
CDS-3UTR GCA 90 bp CACTTTCTAGTGGTTTCTATGCTTACTATCCTTTTACCCCTTACCCTGGCTACTGAGAATTCGTGGAGCTaGCGGTGGTCCAGGATGCCC +
Preference number: 4 (lower is better)
Translates to: HFLVVSMLTILLPLTLATENSWS*RWSRMP
Trigger: GGGCATCCTGGACCACCGGCAGCTCCACGAATTCTC...AGTAGCCAGGGTAAGGGGTAAAAGGATAGTAAGCATAGAAACCACTAGAAAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264731.8
ENST00000354600.10
CDS-3UTR CCA 90 bp GCATCCATGTCAAAGTTGAAGTCATTCCACTCATCTCGGGGTGGGAAAGAGATGCTGTGTTATAGGGACTaGTGGACGAGGAGCCGTTCT +
Preference number: 4 (lower is better)
Translates to: ASMSKLKSFHSSRGGKEMLCYRD*WTRSRS
Trigger: AGAACGGCTCCTCGTCCACCAGTCCCTATAACACAG...CATCTCTTTCCCACCCCGAGATGAGTGGAATGACTTCAACTTTGACATGGATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320472.9
CDS-3UTR CCA 90 bp AAGTGTCTTCAAGTCCTGTTTATGAGGGCTAGATACACACGCACACACATACACAGAGAGCATCGAAGGTaGAGCTGGGCTGTGCGTAGG +
Preference number: 4 (lower is better)
Translates to: KCLQVLFMRARYTRTHIHREHRR*SWAVRR
Trigger: CCTACGCACAGCCCAGCTCCACCTTCGATGCTCTCT...GTGTATGTGTGTGCGTGTGTATCTAGCCCTCATAAACAGGACTTGAAGACACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418709.6
ENST00000437221.5
CDS-3UTR CCA 90 bp CACTTTCTAGTGGTTTCTATGCTTACTATCCTTTTACCCCTTACCCTGGCTACTCTGGGTAGTCGGTGTTaGAGGGGATGGCGGGTGATG +
Preference number: 4 (lower is better)
Translates to: HFLVVSMLTILLPLTLATLGSRC*RGWRVM
Trigger: CATCACCCGCCATCCCCTCCAACACCGACTACCCAG...AGTAGCCAGGGTAAGGGGTAAAAGGATAGTAAGCATAGAAACCACTAGAAAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000264731.8
ENST00000354600.10
CDS-3UTR CCA 90 bp AGCTCTAGATACCTATCACCATACATGATACCCCTTAAGGGAAGGAGTATAGACGGCTCAGCTCATGGTTaGGGCACCGCTTCACCACCT +
Preference number: 4 (lower is better)
Translates to: SSRYLSPYMIPLKGRSIDGSAHG*GTASPP
Trigger: AGGTGGTGAAGCGGTGCCCCAACCATGAGCTGAGCC...GTCTATACTCCTTCCCTTAAGGGGTATCATGTATGGTGATAGGTATCTAGAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264731.8
ENST00000354600.10
CDS-3UTR CCA 90 bp GTAAGAGGTAGCCTCTTACTTCTCCTTCCCCTAAGAAATCAGACAAGAGGAAGGAGTGCCAACCTGGGGTaGCTCATAAGGTACCAGCAC +
Preference number: 4 (lower is better)
Translates to: VRGSLLLLLPLRNQTRGRSANLG*LIRYQH
Trigger: GTGCTGGTACCTTATGAGCCACCCCAGGTTGGCACT...CCTTCCTCTTGTCTGATTTCTTAGGGGAAGGAGAAGTAAGAGGCTACCTCTTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264731.8
ENST00000320472.9
ENST00000354600.10
CDS-3UTR CCA 90 bp GCTTGGATCTCACTTACTCAAAACGTAAGTCTCCTGGCTAAATGCACTGAACAGCTTCCTGTCTCTTCCTaGGCAAGCACAGATCCGGGC +
Preference number: 4 (lower is better)
Translates to: AWISLTQNVSLLAKCTEQLPVSS*ASTDPG
Trigger: GCCCGGATCTGTGCTTGCCCAGGAAGAGACAGGAAG...CTGTTCAGTGCATTTAGCCAGGAGACTTACGTTTTGAGTAAGTGAGATCCAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418709.6
ENST00000437221.5
CDS-3UTR CCA 90 bp GTAAGAGGTAGCCTCTTACTTCTCCTTCCCCTAAGAAATCAGACAAGAGGAAGGGCTCAATCTGATAGATaGTGGTCAGCCCCTGGGTCG +
Preference number: 4 (lower is better)
Translates to: VRGSLLLLLPLRNQTRGRAQSDR*WSAPGS
Trigger: CGACCCAGGGGCTGACCACCATCTATCAGATTGAGC...CCTTCCTCTTGTCTGATTTCTTAGGGGAAGGAGAAGTAAGAGGCTACCTCTTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264731.8
ENST00000354600.10
CDS-3UTR CCA 90 bp GTAAGAGGTAGCCTCTTACTTCTCCTTCCCCTAAGAAATCAGACAAGAGGAAGGTGTAGAGGCACTGCTTaGGGTCCGCAGGAGATGAGA +
Preference number: 4 (lower is better)
Translates to: VRGSLLLLLPLRNQTRGRCRGTA*GPQEMR
Trigger: TCTCATCTCCTGCGGACCCCAAGCAGTGCCTCTACA...CCTTCCTCTTGTCTGATTTCTTAGGGGAAGGAGAAGTAAGAGGCTACCTCTTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264731.8
ENST00000320472.9
ENST00000354600.10
CDS-3UTR CCA 90 bp CCAACATACAGTGGCAGAGGCAGGTACACAGCATTAAGAAATGTTCTACCTACAGCTGGTGACTGGGTGTaGGAAGATGGAGGGGAGGAA +
Preference number: 4 (lower is better)
Translates to: PTYSGRGRYTALRNVLPTAGDWV*EDGGEE
Trigger: TTCCTCCCCTCCATCTTCCCACACCCAGTCACCAGC...TGTAGGTAGAACATTTCTTAATGCTGTGTACCTGCCTCTGCCACTGTATGTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418709.6
ENST00000437221.5
CDS-3UTR TCA 90 bp GAAAGAGATGGTCTGGCGGAGGGTGAATCGCACAGCATCAATAACACGCTCACCTCTTTCCAAGAGAAATaGGCTGGGGTTTCTACGAAA +
Preference number: 4 (lower is better)
Translates to: ERDGLAEGESHSINNTLTSFQEK*AGVSTK
Trigger: TTTCGTAGAAACCCCAGCTCATTTCTCTTGGAAAGA...GGTGAGCGTGTTATTGATGCTGTGCGATTCACCCTCCGCCAGACCATCTCTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320472.9
CDS-3UTR TCA 90 bp AGCTCTAGATACCTATCACCATACATGATACCCCTTAAGGGAAGGAGTATAGACGACGAGGAGCCGTTCTaGATCTGCTGGTCCATGCTG +
Preference number: 4 (lower is better)
Translates to: SSRYLSPYMIPLKGRSIDDEEPF*ICWSML
Trigger: CAGCATGGACCAGCAGATTCAGAACGGCTCCTCGTC...GTCTATACTCCTTCCCTTAAGGGGTATCATGTATGGTGATAGGTATCTAGAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264731.8
ENST00000354600.10
CDS-3UTR TCA 90 bp TCCCTAAGGGAGATGGACGGGAAACTGGGTTCTCACAGTTACTTTCCAACAAACCAATCTGTCCCTCGTTaGATTCACGGCTCAGCTCAT +
Preference number: 4 (lower is better)
Translates to: SLREMDGKLGSHSYFPTNQSVPR*IHGSAH
Trigger: ATGAGCTGAGCCGTGAATTCAACGAGGGACAGATTG...GTTTGTTGGAAAGTAACTGTGAGAACCCAGTTTCCCGTCCATCTCCCTTAGGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264731.8
ENST00000354600.10
CDS-3UTR TCA 90 bp ACAGTGGTTCCTCACCCACCAATGGCCGGTCTAAGGATACAAAATCTGCAGAAACAATCTGTCCCTCGTTaGATTCACGGCTCAGCTCAT +
Preference number: 4 (lower is better)
Translates to: TVVPHPPMAGLRIQNLQKQSVPR*IHGSAH
Trigger: ATGAGCTGAGCCGTGAATTCAACGAGGGACAGATTG...TTTCTGCAGATTTTGTATCCTTAGACCGGCCATTGGTGGGTGAGGAACCACTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418709.6
ENST00000437221.5
CDS-3UTR TCA 90 bp AGAGGTAGCCTCTTACTTCTCCTTCCCCTAAGAAATCAGACAAGAGGAAGGGGATGTACAAGACTGTCGTaGATTCAGTGCCAACCTGGG +
Preference number: 4 (lower is better)
Translates to: RGSLLLLLPLRNQTRGRGCTRLS*IQCQPG
Trigger: CCCAGGTTGGCACTGAATTCACGACAGTCTTGTACA...TCCCCTTCCTCTTGTCTGATTTCTTAGGGGAAGGAGAAGTAAGAGGCTACCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264731.8
ENST00000320472.9
ENST00000354600.10
CDS-3UTR TCA 90 bp CATGTCAAAGTTGAAGTCATTCCACTCATCTCGGGGTGGGAAAGAGATGGTCTGTGTACAAGACTGTCGTaGATTCAGTGCCAACCTGGG +
Preference number: 4 (lower is better)
Translates to: HVKVEVIPLISGWERDGLCTRLS*IQCQPG
Trigger: CCCAGGTTGGCACTGAATTCACGACAGTCTTGTACA...CAGACCATCTCTTTCCCACCCCGAGATGAGTGGAATGACTTCAACTTTGACATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320472.9
CDS-3UTR TCA 90 bp ACAGTGGTTCCTCACCCACCAATGGCCGGTCTAAGGATACAAAATCTGCAGAAAATACCATGTGTGTTCTaGCGAAACGGGCGCTTCGTA +
Preference number: 4 (lower is better)
Translates to: TVVPHPPMAGLRIQNLQKIPCVF*RNGRFV
Trigger: TACGAAGCGCCCGTTTCGTCAGAACACACATGGTAT...TTTCTGCAGATTTTGTATCCTTAGACCGGCCATTGGTGGGTGAGGAACCACTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418709.6
ENST00000437221.5
CDS-3UTR TCA 90 bp GTAAGAGGTAGCCTCTTACTTCTCCTTCCCCTAAGAAATCAGACAAGAGGAAGGACTCCCCCTCCTCTTTaGTGCGCTGTTGCTTATTGC +
Preference number: 4 (lower is better)
Translates to: VRGSLLLLLPLRNQTRGRTPPPL*CAVAYC
Trigger: GCAATAAGCAACAGCGCATCAAAGAGGAGGGGGAGT...CCTTCCTCTTGTCTGATTTCTTAGGGGAAGGAGAAGTAAGAGGCTACCTCTTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264731.8
ENST00000320472.9
ENST00000354600.10
CDS-3UTR TCA 90 bp CAAAAACTTTTCAATTCTTCAGCTAACTGCATTGAGCTGAGGCCACAAGAACTCGAAGAGCTCACATGGTaGGGCTCACTCCCCCTCCTC +
Preference number: 4 (lower is better)
Translates to: QKLFNSSANCIELRPQELEELTW*GSLPLL
Trigger: GAGGAGGGGGAGTGAGCCTCACCATGTGAGCTCTTC...GAGTTCTTGTGGCCTCAGCTCAATGCAGTTAGCTGAAGAATTGAAAAGTTTTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000264731.8
ENST00000354600.10
CDS-3UTR TCA 90 bp TCCCTAAGGGAGATGGACGGGAAACTGGGTTCTCACAGTTACTTTCCAACAAACTGCAATGACAGCCCTTaGCCAGAATGCATGGGAAGA +
Preference number: 4 (lower is better)
Translates to: SLREMDGKLGSHSYFPTNCNDSP*PECMGR
Trigger: TCTTCCCATGCATTCTGGTCAAGGGCTGTCATTGCA...GTTTGTTGGAAAGTAACTGTGAGAACCCAGTTTCCCGTCCATCTCCCTTAGGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264731.8
ENST00000354600.10
CDS-3UTR GCA 90 bp CACTTTCTAGTGGTTTCTATGCTTACTATCCTTTTACCCCTTACCCTGGCTACTCGTCGGCCCAGGACTTaGCCATCTCTGGTTTCCAGA +
Preference number: 4 (lower is better)
Translates to: HFLVVSMLTILLPLTLATRRPRT*PSLVSR
Trigger: TCTGGAAACCAGAGATGGGCAAGTCCTGGGCCGACG...AGTAGCCAGGGTAAGGGGTAAAAGGATAGTAAGCATAGAAACCACTAGAAAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264731.8
ENST00000354600.10
CDS-3UTR GCA 90 bp ATGATCACCTCGCTGCCCAGCAGTACACTTGACACCTTCGTTTCTTACTACTTGTGGTGCTGCTGCTGTTaGTGTTGCCTGTACGTTTCA +
Preference number: 4 (lower is better)
Translates to: MITSLPSSTLDTFVSYYLWCCCC*CCLYVS
Trigger: TGAAACGTACAGGCAACAGCAACAGCAGCAGCACCA...CAAGTAGTAAGAAACGAAGGTGTCAAGTGTACTGCTGGGCAGCGAGGTGATCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418709.6
ENST00000437221.5
CDS-3UTR GCA 90 bp GTAAGAGGTAGCCTCTTACTTCTCCTTCCCCTAAGAAATCAGACAAGAGGAAGGAAGTGCTGGTGCTGCTaGTGTTGCTGTTGCCTGTAC +
Preference number: 4 (lower is better)
Translates to: VRGSLLLLLPLRNQTRGRKCWCC*CCCCLY
Trigger: GTACAGGCAACAGCAACAGCAGCAGCACCAGCACTT...CCTTCCTCTTGTCTGATTTCTTAGGGGAAGGAGAAGTAAGAGGCTACCTCTTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264731.8
ENST00000320472.9
ENST00000354600.10
CDS-3UTR GCA 90 bp GTAAGAGGTAGCCTCTTACTTCTCCTTCCCCTAAGAAATCAGACAAGAGGAAGGAGTAAGTGCTGGTGCTaGTGCTGTTGCTGTTGCCTG +
Preference number: 4 (lower is better)
Translates to: VRGSLLLLLPLRNQTRGRSKCWC*CCCCCL
Trigger: CAGGCAACAGCAACAGCAGCAGCACCAGCACTTACT...CCTTCCTCTTGTCTGATTTCTTAGGGGAAGGAGAAGTAAGAGGCTACCTCTTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264731.8
ENST00000320472.9
ENST00000354600.10
CDS-3UTR GCA 90 bp CAAAAACTTTTCAATTCTTCAGCTAACTGCATTGAGCTGAGGCCACAAGAACTCGAGAATTCGTGGAGCTaGCGGTGGTCCAGGATGCCC +
Preference number: 4 (lower is better)
Translates to: QKLFNSSANCIELRPQELENSWS*RWSRMP
Trigger: GGGCATCCTGGACCACCGGCAGCTCCACGAATTCTC...GAGTTCTTGTGGCCTCAGCTCAATGCAGTTAGCTGAAGAATTGAAAAGTTTTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264731.8
ENST00000354600.10
CDS-3UTR GCA 90 bp AGAGGTAGCCTCTTACTTCTCCTTCCCCTAAGAAATCAGACAAGAGGAAGGGGATGCGCTGTTGCTTATTaGGGCGAGCATCCATGTCAA +
Preference number: 4 (lower is better)
Translates to: RGSLLLLLPLRNQTRGRGCAVAY*GEHPCQ
Trigger: TTGACATGGATGCTCGCCGCAATAAGCAACAGCGCA...TCCCCTTCCTCTTGTCTGATTTCTTAGGGGAAGGAGAAGTAAGAGGCTACCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264731.8
ENST00000320472.9
ENST00000354600.10
CDS-3UTR CCA 90 bp GCTTGGATCTCACTTACTCAAAACGTAAGTCTCCTGGCTAAATGCACTGAACAGTGTACTGTGGCCACATaGGGTCACTCAGGTCCGAGT +
Preference number: 4 (lower is better)
Translates to: AWISLTQNVSLLAKCTEQCTVAT*GHSGPS
Trigger: ACTCGGACCTGAGTGACCCCATGTGGCCACAGTACA...CTGTTCAGTGCATTTAGCCAGGAGACTTACGTTTTGAGTAAGTGAGATCCAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418709.6
CDS-3UTR CCA 90 bp CCTTTGAGCAGTTGGGTCTCTGAGCCAAAGTGTCTTCAAGTCCTGTTTATGAGGTGTTATAGGGACTGGTaGACGAGGAGCCGTTCTGAA +
Preference number: 4 (lower is better)
Translates to: PLSSWVSEPKCLQVLFMRCYRDW*TRSRSE
Trigger: TTCAGAACGGCTCCTCGTCCACCAGTCCCTATAACA...CCTCATAAACAGGACTTGAAGACACTTTGGCTCAGAGACCCAACTGCTCAAAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418709.6
ENST00000437221.5
CDS-3UTR CCA 90 bp GTAAGAGGTAGCCTCTTACTTCTCCTTCCCCTAAGAAATCAGACAAGAGGAAGGCTGTGTTATAGGGACTaGTGGACGAGGAGCCGTTCT +
Preference number: 4 (lower is better)
Translates to: VRGSLLLLLPLRNQTRGRLCYRD*WTRSRS
Trigger: AGAACGGCTCCTCGTCCACCAGTCCCTATAACACAG...CCTTCCTCTTGTCTGATTTCTTAGGGGAAGGAGAAGTAAGAGGCTACCTCTTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264731.8
ENST00000320472.9
ENST00000354600.10
CDS-3UTR CCA 90 bp CGCTGCCCAGCAGTACACTTGACACCTTCGTTTCTTACTACTTGCAATATTATTGCGGTGCTCGACTGCTaGAAGGACACGTCGAAACTG +
Preference number: 4 (lower is better)
Translates to: RCPAVHLTPSFLTTCNIIAVLDC*KDTSKL
Trigger: CAGTTTCGACGTGTCCTTCCAGCAGTCGAGCACCGC...AATAATATTGCAAGTAGTAAGAAACGAAGGTGTCAAGTGTACTGCTGGGCAGCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418709.6
ENST00000437221.5
CDS-3UTR CCA 90 bp TCCCTAAGGGAGATGGACGGGAAACTGGGTTCTCACAGTTACTTTCCAACAAACGTTTCTTCAGTTCAGTaGAATACGTCCAGGTGGCCG +
Preference number: 4 (lower is better)
Translates to: SLREMDGKLGSHSYFPTNVSSVQ*NTSRWP
Trigger: CGGCCACCTGGACGTATTCCACTGAACTGAAGAAAC...GTTTGTTGGAAAGTAACTGTGAGAACCCAGTTTCCCGTCCATCTCCCTTAGGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264731.8
ENST00000354600.10
CDS-3UTR CCA 90 bp ACAGTGGTTCCTCACCCACCAATGGCCGGTCTAAGGATACAAAATCTGCAGAAATCTACATACTGGGCATaGCTGTTCCCCTCTACTCGA +
Preference number: 4 (lower is better)
Translates to: TVVPHPPMAGLRIQNLQKSTYWA*LFPSTR
Trigger: TCGAGTAGAGGGGAACAGCCATGCCCAGTATGTAGA...TTTCTGCAGATTTTGTATCCTTAGACCGGCCATTGGTGGGTGAGGAACCACTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418709.6
ENST00000437221.5
CDS-3UTR CCA 90 bp AAGTGTCTTCAAGTCCTGTTTATGAGGGCTAGATACACACGCACACACATACACAGTGCCAACCTGGGGTaGCTCATAAGGTACCAGCAC +
Preference number: 4 (lower is better)
Translates to: KCLQVLFMRARYTRTHIHSANLG*LIRYQH
Trigger: GTGCTGGTACCTTATGAGCCACCCCAGGTTGGCACT...GTGTATGTGTGTGCGTGTGTATCTAGCCCTCATAAACAGGACTTGAAGACACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418709.6
ENST00000437221.5
CDS-3UTR CCA 90 bp AGCTCTAGATACCTATCACCATACATGATACCCCTTAAGGGAAGGAGTATAGACCTTCCTGTCTCTTCCTaGGCAAGCACAGATCCGGGC +
Preference number: 4 (lower is better)
Translates to: SSRYLSPYMIPLKGRSIDLPVSS*ASTDPG
Trigger: GCCCGGATCTGTGCTTGCCCAGGAAGAGACAGGAAG...GTCTATACTCCTTCCCTTAAGGGGTATCATGTATGGTGATAGGTATCTAGAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264731.8
ENST00000354600.10
CDS-3UTR CCA 90 bp TTCTTCCCCTTAATGGGTTTGCAAAGCTGCATGCTTGTTGCAGAAGTTTACAGTCCACTCATCTCGGGGTaGGAAAGAGATGGTCTGGCG +
Preference number: 4 (lower is better)
Translates to: FFPLMGLQSCMLVAEVYSPLISG*ERDGLA
Trigger: CGCCAGACCATCTCTTTCCCACCCCGAGATGAGTGG...ACTGTAAACTTCTGCAACAAGCATGCAGCTTTGCAAACCCATTAAGGGGAAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264731.8
ENST00000354600.10
CDS-3UTR CCA 90 bp ATGATCACCTCGCTGCCCAGCAGTACACTTGACACCTTCGTTTCTTACTACTTGCACAGACAAACACAGTaGTTCCTCACCCACCAATGG +
Preference number: 4 (lower is better)
Translates to: MITSLPSSTLDTFVSYYLHRQTQ*FLTHQW
Trigger: CCATTGGTGGGTGAGGAACCACTGTGTTTGTCTGTG...CAAGTAGTAAGAAACGAAGGTGTCAAGTGTACTGCTGGGCAGCGAGGTGATCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418709.6
ENST00000437221.5
CDS-3UTR CCA 90 bp GCTTGGATCTCACTTACTCAAAACGTAAGTCTCCTGGCTAAATGCACTGAACAGTACAGTGCTGGTGACTaGGTGTGGGAAGATGGAGGG +
Preference number: 4 (lower is better)
Translates to: AWISLTQNVSLLAKCTEQYSAGD*VWEDGG
Trigger: CCCTCCATCTTCCCACACCCAGTCACCAGCACTGTA...CTGTTCAGTGCATTTAGCCAGGAGACTTACGTTTTGAGTAAGTGAGATCCAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418709.6
ENST00000437221.5
CDS-3UTR TCA 90 bp GCATCCATGTCAAAGTTGAAGTCATTCCACTCATCTCGGGGTGGGAAAGAGATGGTCAATGGGCTGAACTaGACATATAGGCTGTTCCAG +
Preference number: 4 (lower is better)
Translates to: ASMSKLKSFHSSRGGKEMVNGLN*TYRLFQ
Trigger: CTGGAACAGCCTATATGTTCAGTTCAGCCCATTGAC...CATCTCTTTCCCACCCCGAGATGAGTGGAATGACTTCAACTTTGACATGGATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320472.9
CDS-3UTR TCA 90 bp GTAAGAGGTAGCCTCTTACTTCTCCTTCCCCTAAGAAATCAGACAAGAGGAAGGCAATCTGTCCCTCGTTaGATTCACGGCTCAGCTCAT +
Preference number: 4 (lower is better)
Translates to: VRGSLLLLLPLRNQTRGRQSVPR*IHGSAH
Trigger: ATGAGCTGAGCCGTGAATTCAACGAGGGACAGATTG...CCTTCCTCTTGTCTGATTTCTTAGGGGAAGGAGAAGTAAGAGGCTACCTCTTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264731.8
ENST00000320472.9
ENST00000354600.10
CDS-3UTR TCA 90 bp AGCTCTAGATACCTATCACCATACATGATACCCCTTAAGGGAAGGAGTATAGACGACGTCGGGTGTTTTTaGACTGGCTGCTATGGGCCT +
Preference number: 4 (lower is better)
Translates to: SSRYLSPYMIPLKGRSIDDVGCF*TGCYGP
Trigger: AGGCCCATAGCAGCCAGTTCAAAAACACCCGACGTC...GTCTATACTCCTTCCCTTAAGGGGTATCATGTATGGTGATAGGTATCTAGAGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264731.8
ENST00000354600.10
CDS-3UTR TCA 90 bp TCCCTAAGGGAGATGGACGGGAAACTGGGTTCTCACAGTTACTTTCCAACAAACGAAGCTTATGTGCAATaGCAGCCCTTGACCAGAATG +
Preference number: 4 (lower is better)
Translates to: SLREMDGKLGSHSYFPTNEAYVQ*QPLTRM
Trigger: CATTCTGGTCAAGGGCTGTCATTGCACATAAGCTTC...GTTTGTTGGAAAGTAACTGTGAGAACCCAGTTTCCCGTCCATCTCCCTTAGGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264731.8
ENST00000354600.10
CDS-3UTR TCA 90 bp AGAGGTAGCCTCTTACTTCTCCTTCCCCTAAGAAATCAGACAAGAGGAAGGGGACTAACTGCATTGAGCTaGGGCCACAAGAACTCCATT +
Preference number: 4 (lower is better)
Translates to: RGSLLLLLPLRNQTRGRGLTALS*GHKNSI
Trigger: AATGGAGTTCTTGTGGCCTCAGCTCAATGCAGTTAG...TCCCCTTCCTCTTGTCTGATTTCTTAGGGGAAGGAGAAGTAAGAGGCTACCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264731.8
ENST00000354600.10
CDS-3UTR TCA 90 bp CGCTGCCCAGCAGTACACTTGACACCTTCGTTTCTTACTACTTGCAATATTATTGTGGCTTTGTGCCTTTaGGCAGTTGGGTCTCTGAGC +
Preference number: 4 (lower is better)
Translates to: RCPAVHLTPSFLTTCNIIVALCL*AVGSLS
Trigger: GCTCAGAGACCCAACTGCTCAAAGGCACAAAGCCAC...AATAATATTGCAAGTAGTAAGAAACGAAGGTGTCAAGTGTACTGCTGGGCAGCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418709.6
ENST00000437221.5
CDS-3UTR TCA 90 bp CCTTTGAGCAGTTGGGTCTCTGAGCCAAAGTGTCTTCAAGTCCTGTTTATGAGGGCCCAGCAGTACACTTaGCACCTTCGTTTCTTACTA +
Preference number: 4 (lower is better)
Translates to: PLSSWVSEPKCLQVLFMRAQQYT*HLRFLL
Trigger: TAGTAAGAAACGAAGGTGTCAAGTGTACTGCTGGGC...CCTCATAAACAGGACTTGAAGACACTTTGGCTCAGAGACCCAACTGCTCAAAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418709.6
ENST00000437221.5
CDS-3UTR GCA 90 bp CGCTGCCCAGCAGTACACTTGACACCTTCGTTTCTTACTACTTGCAATATTATTCTCAGGTCCGAGTCCTaGATGCGGATACAGTCCATG +
Preference number: 4 (lower is better)
Translates to: RCPAVHLTPSFLTTCNIILRSES*MRIQSM
Trigger: CATGGACTGTATCCGCATGCAGGACTCGGACCTGAG...AATAATATTGCAAGTAGTAAGAAACGAAGGTGTCAAGTGTACTGCTGGGCAGCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418709.6
CDS-3UTR GCA 90 bp CACTTTCTAGTGGTTTCTATGCTTACTATCCTTTTACCCCTTACCCTGGCTACTGAATCTGCTGGTCCATaGTGTTCAGGAGCCCCAGGT +
Preference number: 4 (lower is better)
Translates to: HFLVVSMLTILLPLTLATESAGP*CSGAPG
Trigger: ACCTGGGGCTCCTGAACAGCATGGACCAGCAGATTC...AGTAGCCAGGGTAAGGGGTAAAAGGATAGTAAGCATAGAAACCACTAGAAAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000264731.8
ENST00000354600.10
CDS-3UTR GCA 90 bp TCTTTAATTTCCAGTCCAGGAGTGCTGATTTTAACACGTCTGCTTGGATCTCACGAATCTGCTGGTCCATaGTGTTCAGGAGCCCCAGGT +
Preference number: 4 (lower is better)
Translates to: SLISSPGVLILTRLLGSHESAGP*CSGAPG
Trigger: ACCTGGGGCTCCTGAACAGCATGGACCAGCAGATTC...GTGAGATCCAAGCAGACGTGTTAAAATCAGCACTCCTGGACTGGAAATTAAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418709.6
ENST00000437221.5
CDS-3UTR GCA 90 bp TCTTTAATTTCCAGTCCAGGAGTGCTGATTTTAACACGTCTGCTTGGATCTCACTTGGCGGTGCTCGACTaGTGGAAGGACACGTCGAAA +
Preference number: 4 (lower is better)
Translates to: SLISSPGVLILTRLLGSHLAVLD*WKDTSK
Trigger: TTTCGACGTGTCCTTCCAGCAGTCGAGCACCGCCAA...GTGAGATCCAAGCAGACGTGTTAAAATCAGCACTCCTGGACTGGAAATTAAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418709.6
ENST00000437221.5
CDS-3UTR GCA 90 bp CCAACATACAGTGGCAGAGGCAGGTACACAGCATTAAGAAATGTTCTACCTACAAAGTGCTGGTGCTGCTaGTGTTGCTGTTGCCTGTAC +
Preference number: 4 (lower is better)
Translates to: PTYSGRGRYTALRNVLPTKCWCC*CCCCLY
Trigger: GTACAGGCAACAGCAACAGCAGCAGCACCAGCACTT...TGTAGGTAGAACATTTCTTAATGCTGTGTACCTGCCTCTGCCACTGTATGTTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418709.6
ENST00000437221.5
CDS-3UTR GCA 90 bp CTCCCCCTCCTCTTTGATGCGCTGTTGCTTATTGCGGCGAGCATCCATGTCAAAAAGGCAGCTTGTTCATaGTGTTCATTTTGTTCAGAG +
Preference number: 4 (lower is better)
Translates to: LPLLFDALLLIAASIHVKKAACS*CSFCSE
Trigger: CTCTGAACAAAATGAACAGCATGAACAAGCTGCCTT...TTTGACATGGATGCTCGCCGCAATAAGCAACAGCGCATCAAAGAGGAGGGGGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000320472.9
CDS-3UTR GCA 90 bp TTGCTTATTGCGGCGAGCATCCATGTCAAAGTTGAAGTCATTCCACTCATCTCGTGCGCTGTTGCTTATTaGGGCGAGCATCCATGTCAA +
Preference number: 4 (lower is better)
Translates to: LLIAASIHVKVEVIPLISCAVAY*GEHPCQ
Trigger: TTGACATGGATGCTCGCCGCAATAAGCAACAGCGCA...CGAGATGAGTGGAATGACTTCAACTTTGACATGGATGCTCGCCGCAATAAGCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320472.9
CDS-3UTR GCA 90 bp TTGCTTATTGCGGCGAGCATCCATGTCAAAGTTGAAGTCATTCCACTCATCTCGTCTTTGATGCGCTGTTaGTTATTGCGGCGAGCATCC +
Preference number: 4 (lower is better)
Translates to: LLIAASIHVKVEVIPLISSLMRC*LLRRAS
Trigger: GGATGCTCGCCGCAATAAGCAACAGCGCATCAAAGA...CGAGATGAGTGGAATGACTTCAACTTTGACATGGATGCTCGCCGCAATAAGCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320472.9
CDS-3UTR CCA 90 bp CTTATTGCGGCGAGCATCCATGTCAAAGTTGAAGTCATTCCACTCATCTCGGGGAAATCCCAGATATGCTaGAAAACCTCTGGACTGAGG +
Preference number: 4 (lower is better)
Translates to: LIAASIHVKVEVIPLISGKSQIC*KTSGLR
Trigger: CCTCAGTCCAGAGGTTTTCCAGCATATCTGGGATTT...CCCCGAGATGAGTGGAATGACTTCAACTTTGACATGGATGCTCGCCGCAATAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320472.9
CDS-3UTR CCA 90 bp CACTTTCTAGTGGTTTCTATGCTTACTATCCTTTTACCCCTTACCCTGGCTACTTGTACTGTGGCCACATaGGGTCACTCAGGTCCGAGT +
Preference number: 4 (lower is better)
Translates to: HFLVVSMLTILLPLTLATCTVAT*GHSGPS
Trigger: ACTCGGACCTGAGTGACCCCATGTGGCCACAGTACA...AGTAGCCAGGGTAAGGGGTAAAAGGATAGTAAGCATAGAAACCACTAGAAAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264731.8
CDS-3UTR CCA 90 bp GCTTGGATCTCACTTACTCAAAACGTAAGTCTCCTGGCTAAATGCACTGAACAGCTGTGTTATAGGGACTaGTGGACGAGGAGCCGTTCT +
Preference number: 4 (lower is better)
Translates to: AWISLTQNVSLLAKCTEQLCYRD*WTRSRS
Trigger: AGAACGGCTCCTCGTCCACCAGTCCCTATAACACAG...CTGTTCAGTGCATTTAGCCAGGAGACTTACGTTTTGAGTAAGTGAGATCCAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418709.6
ENST00000437221.5
CDS-3UTR CCA 90 bp AGCTCTAGATACCTATCACCATACATGATACCCCTTAAGGGAAGGAGTATAGACAGCTCCCTGAGGAGGTaGGGTCATCACCTTGATCTG +
Preference number: 4 (lower is better)
Translates to: SSRYLSPYMIPLKGRSIDSSLRR*GHHLDL
Trigger: CAGATCAAGGTGATGACCCCACCTCCTCAGGGAGCT...GTCTATACTCCTTCCCTTAAGGGGTATCATGTATGGTGATAGGTATCTAGAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264731.8
ENST00000354600.10
CDS-3UTR CCA 90 bp TCTTTAATTTCCAGTCCAGGAGTGCTGATTTTAACACGTCTGCTTGGATCTCACAGCTCCCTGAGGAGGTaGGGTCATCACCTTGATCTG +
Preference number: 4 (lower is better)
Translates to: SLISSPGVLILTRLLGSHSSLRR*GHHLDL
Trigger: CAGATCAAGGTGATGACCCCACCTCCTCAGGGAGCT...GTGAGATCCAAGCAGACGTGTTAAAATCAGCACTCCTGGACTGGAAATTAAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418709.6
ENST00000437221.5
CDS-3UTR CCA 90 bp GTAAGAGGTAGCCTCTTACTTCTCCTTCCCCTAAGAAATCAGACAAGAGGAAGGTCTACATACTGGGCATaGCTGTTCCCCTCTACTCGA +
Preference number: 4 (lower is better)
Translates to: VRGSLLLLLPLRNQTRGRSTYWA*LFPSTR
Trigger: TCGAGTAGAGGGGAACAGCCATGCCCAGTATGTAGA...CCTTCCTCTTGTCTGATTTCTTAGGGGAAGGAGAAGTAAGAGGCTACCTCTTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264731.8
ENST00000320472.9
ENST00000354600.10
CDS-3UTR CCA 90 bp GTAAGAGGTAGCCTCTTACTTCTCCTTCCCCTAAGAAATCAGACAAGAGGAAGGGGATCTTCTACATACTaGGCATGGCTGTTCCCCTCT +
Preference number: 4 (lower is better)
Translates to: VRGSLLLLLPLRNQTRGRGSSTY*AWLFPS
Trigger: AGAGGGGAACAGCCATGCCCAGTATGTAGAAGATCC...CCTTCCTCTTGTCTGATTTCTTAGGGGAAGGAGAAGTAAGAGGCTACCTCTTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000264731.8
ENST00000320472.9
ENST00000354600.10
CDS-3UTR CCA 90 bp CACTTTCTAGTGGTTTCTATGCTTACTATCCTTTTACCCCTTACCCTGGCTACTAGTGCCAACCTGGGGTaGCTCATAAGGTACCAGCAC +
Preference number: 4 (lower is better)
Translates to: HFLVVSMLTILLPLTLATSANLG*LIRYQH
Trigger: GTGCTGGTACCTTATGAGCCACCCCAGGTTGGCACT...AGTAGCCAGGGTAAGGGGTAAAAGGATAGTAAGCATAGAAACCACTAGAAAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000264731.8
ENST00000354600.10
CDS-3UTR CCA 90 bp CCCTTTCAATCTTTAATTTCCAGTCCAGGAGTGCTGATTTTAACACGTCTGCTTCTTCCTGTCTCTTCCTaGGCAAGCACAGATCCGGGC +
Preference number: 4 (lower is better)
Translates to: PFQSLISSPGVLILTRLLLPVSS*ASTDPG
Trigger: GCCCGGATCTGTGCTTGCCCAGGAAGAGACAGGAAG...AAGCAGACGTGTTAAAATCAGCACTCCTGGACTGGAAATTAAAGATTGAAAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418709.6
ENST00000437221.5
CDS-3UTR CCA 90 bp AGCTCTAGATACCTATCACCATACATGATACCCCTTAAGGGAAGGAGTATAGACCCAGCCATTGGCATGTaGGTGCCCATCATGGGAATG +
Preference number: 4 (lower is better)
Translates to: SSRYLSPYMIPLKGRSIDPAIGM*VPIMGM
Trigger: CATTCCCATGATGGGCACCCACATGCCAATGGCTGG...GTCTATACTCCTTCCCTTAAGGGGTATCATGTATGGTGATAGGTATCTAGAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264731.8
ENST00000354600.10
CDS-3UTR CCA 90 bp CACTTTCTAGTGGTTTCTATGCTTACTATCCTTTTACCCCTTACCCTGGCTACTCAATGCTGCAATCTGTaGGATACGGAGGTGGGGGTG +
Preference number: 4 (lower is better)
Translates to: HFLVVSMLTILLPLTLATQCCNL*DTEVGV
Trigger: CACCCCCACCTCCGTATCCCACAGATTGCAGCATTG...AGTAGCCAGGGTAAGGGGTAAAAGGATAGTAAGCATAGAAACCACTAGAAAGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000264731.8
ENST00000354600.10
CDS-3UTR CCA 90 bp AGCTCTAGATACCTATCACCATACATGATACCCCTTAAGGGAAGGAGTATAGACGGGAAAGAGATGGTCTaGCGGAGGGTGAATCGCACA +
Preference number: 4 (lower is better)
Translates to: SSRYLSPYMIPLKGRSIDGKEMV*RRVNRT
Trigger: TGTGCGATTCACCCTCCGCCAGACCATCTCTTTCCC...GTCTATACTCCTTCCCTTAAGGGGTATCATGTATGGTGATAGGTATCTAGAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264731.8
ENST00000354600.10
CDS-3UTR CCA 90 bp CCTTTGAGCAGTTGGGTCTCTGAGCCAAAGTGTCTTCAAGTCCTGTTTATGAGGCTGGGTGTGGGAAGATaGAGGGGAGGAACATTTTTA +
Preference number: 4 (lower is better)
Translates to: PLSSWVSEPKCLQVLFMRLGVGR*RGGTFL
Trigger: TAAAAATGTTCCTCCCCTCCATCTTCCCACACCCAG...CCTCATAAACAGGACTTGAAGACACTTTGGCTCAGAGACCCAACTGCTCAAAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000418709.6
ENST00000437221.5
CDS-3UTR CCA 90 bp CTGCCCAGCAGTACACTTGACACCTTCGTTTCTTACTACTTGCAATATTATTACGCTGGTGACTGGGTGTaGGAAGATGGAGGGGAGGAA +
Preference number: 4 (lower is better)
Translates to: LPSSTLDTFVSYYLQYYYAGDWV*EDGGEE
Trigger: TTCCTCCCCTCCATCTTCCCACACCCAGTCACCAGC...GTAATAATATTGCAAGTAGTAAGAAACGAAGGTGTCAAGTGTACTGCTGGGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418709.6
ENST00000437221.5
CDS-3UTR TCA 90 bp TCCCTAAGGGAGATGGACGGGAAACTGGGTTCTCACAGTTACTTTCCAACAAACGGAAAACCTCTGGACTaGGGAATTCATTTGTCTGTG +
Preference number: 4 (lower is better)
Translates to: SLREMDGKLGSHSYFPTNGKPLD*GIHLSV
Trigger: CACAGACAAATGAATTCCTCAGTCCAGAGGTTTTCC...GTTTGTTGGAAAGTAACTGTGAGAACCCAGTTTCCCGTCCATCTCCCTTAGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264731.8
CDS-3UTR TCA 90 bp GCTTGGATCTCACTTACTCAAAACGTAAGTCTCCTGGCTAAATGCACTGAACAGCAATCTGTCCCTCGTTaGATTCACGGCTCAGCTCAT +
Preference number: 4 (lower is better)
Translates to: AWISLTQNVSLLAKCTEQQSVPR*IHGSAH
Trigger: ATGAGCTGAGCCGTGAATTCAACGAGGGACAGATTG...CTGTTCAGTGCATTTAGCCAGGAGACTTACGTTTTGAGTAAGTGAGATCCAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418709.6
ENST00000437221.5
CDS-3UTR TCA 90 bp CTCTTTGATGCGCTGTTGCTTATTGCGGCGAGCATCCATGTCAAAGTTGAAGTCTCTACTCGAATCAAATaGCTAGGAGGGGCAATCTGT +
Preference number: 4 (lower is better)
Translates to: LFDALLLIAASIHVKVEVSTRIK*LGGAIC
Trigger: ACAGATTGCCCCTCCTAGTCATTTGATTCGAGTAGA...GACTTCAACTTTGACATGGATGCTCGCCGCAATAAGCAACAGCGCATCAAAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320472.9
CDS-3UTR TCA 90 bp TCCCTAAGGGAGATGGACGGGAAACTGGGTTCTCACAGTTACTTTCCAACAAACCACTCTGTCTTCCTGTaGTGGGATCTTCTACATACT +
Preference number: 4 (lower is better)
Translates to: SLREMDGKLGSHSYFPTNHSVFL*WDLLHT
Trigger: AGTATGTAGAAGATCCCATCACAGGAAGACAGAGTG...GTTTGTTGGAAAGTAACTGTGAGAACCCAGTTTCCCGTCCATCTCCCTTAGGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264731.8
ENST00000354600.10
CDS-3UTR TCA 90 bp ATGATCACCTCGCTGCCCAGCAGTACACTTGACACCTTCGTTTCTTACTACTTGCACTCTGTCTTCCTGTaGTGGGATCTTCTACATACT +
Preference number: 4 (lower is better)
Translates to: MITSLPSSTLDTFVSYYLHSVFL*WDLLHT
Trigger: AGTATGTAGAAGATCCCATCACAGGAAGACAGAGTG...CAAGTAGTAAGAAACGAAGGTGTCAAGTGTACTGCTGGGCAGCGAGGTGATCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418709.6
ENST00000437221.5
CDS-3UTR TCA 90 bp AAGTGTCTTCAAGTCCTGTTTATGAGGGCTAGATACACACGCACACACATACACTGTACAAGACTGTCGTaGATTCAGTGCCAACCTGGG +
Preference number: 4 (lower is better)
Translates to: KCLQVLFMRARYTRTHIHCTRLS*IQCQPG
Trigger: CCCAGGTTGGCACTGAATTCACGACAGTCTTGTACA...GTGTATGTGTGTGCGTGTGTATCTAGCCCTCATAAACAGGACTTGAAGACACTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418709.6
ENST00000437221.5
CDS-3UTR TCA 90 bp AGAGGTAGCCTCTTACTTCTCCTTCCCCTAAGAAATCAGACAAGAGGAAGGGGAGGGATCTTCGTTTCTTaGTGGATGTCATCTGGATAC +
Preference number: 4 (lower is better)
Translates to: RGSLLLLLPLRNQTRGRGGIFVS*WMSSGY
Trigger: GTATCCAGATGACATCCATCAAGAAACGAAGATCCC...TCCCCTTCCTCTTGTCTGATTTCTTAGGGGAAGGAGAAGTAAGAGGCTACCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264731.8
ENST00000320472.9
ENST00000354600.10
CDS-3UTR TCA 90 bp AGAGGTAGCCTCTTACTTCTCCTTCCCCTAAGAAATCAGACAAGAGGAAGGGGAGTTTCAATTGTGTGCTaGGGAAGGTACTGCATGAGT +
Preference number: 4 (lower is better)
Translates to: RGSLLLLLPLRNQTRGRGVSIVC*GRYCMS
Trigger: ACTCATGCAGTACCTTCCTCAGCACACAATTGAAAC...TCCCCTTCCTCTTGTCTGATTTCTTAGGGGAAGGAGAAGTAAGAGGCTACCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264731.8
ENST00000320472.9
ENST00000354600.10
CDS-3UTR TCA 90 bp CACTTTCTAGTGGTTTCTATGCTTACTATCCTTTTACCCCTTACCCTGGCTACTTCAGCCCCTGGGTCGTaGAATAGTCCAGACATGATG +
Preference number: 4 (lower is better)
Translates to: HFLVVSMLTILLPLTLATSAPGS*NSPDMM
Trigger: CATCATGTCTGGACTATTTCACGACCCAGGGGCTGA...AGTAGCCAGGGTAAGGGGTAAAAGGATAGTAAGCATAGAAACCACTAGAAAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000264731.8
ENST00000354600.10
CDS-3UTR TCA 90 bp GTAAGAGGTAGCCTCTTACTTCTCCTTCCCCTAAGAAATCAGACAAGAGGAAGGCTAGGGAGAAGGCTTTaGAGATTAAGCAGGAGTGCT +
Preference number: 4 (lower is better)
Translates to: VRGSLLLLLPLRNQTRGRLGRRL*RLSRSA
Trigger: AGCACTCCTGCTTAATCTTCAAAGCCTTCTCCCTAG...CCTTCCTCTTGTCTGATTTCTTAGGGGAAGGAGAAGTAAGAGGCTACCTCTTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264731.8
ENST00000320472.9
ENST00000354600.10
CDS-3UTR TCA 90 bp CCTTTGAGCAGTTGGGTCTCTGAGCCAAAGTGTCTTCAAGTCCTGTTTATGAGGATTCCTGAAGCAGGCTaGAAGGAGATGTTTCTGAAG +
Preference number: 4 (lower is better)
Translates to: PLSSWVSEPKCLQVLFMRIPEAG*KEMFLK
Trigger: CTTCAGAAACATCTCCTTTCAGCCTGCTTCAGGAAT...CCTCATAAACAGGACTTGAAGACACTTTGGCTCAGAGACCCAACTGCTCAAAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418709.6
ENST00000437221.5
CDS-3UTR TCA 90 bp CTGCCCAGCAGTACACTTGACACCTTCGTTTCTTACTACTTGCAATATTATTACGTGGCTTTGTGCCTTTaGGCAGTTGGGTCTCTGAGC +
Preference number: 4 (lower is better)
Translates to: LPSSTLDTFVSYYLQYYYVALCL*AVGSLS
Trigger: GCTCAGAGACCCAACTGCTCAAAGGCACAAAGCCAC...GTAATAATATTGCAAGTAGTAAGAAACGAAGGTGTCAAGTGTACTGCTGGGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418709.6
ENST00000437221.5
CDS-3UTR TCA 90 bp CCTTTGAGCAGTTGGGTCTCTGAGCCAAAGTGTCTTCAAGTCCTGTTTATGAGGTTAAAAGGGTCTGACTaGGTCTCTCAGTCACCTACA +
Preference number: 4 (lower is better)
Translates to: PLSSWVSEPKCLQVLFMRLKGSD*VSQSPT
Trigger: TGTAGGTGACTGAGAGACTCAGTCAGACCCTTTTAA...CCTCATAAACAGGACTTGAAGACACTTTGGCTCAGAGACCCAACTGCTCAAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418709.6
ENST00000437221.5
CDS-3UTR GCA 90 bp TCCCTAAGGGAGATGGACGGGAAACTGGGTTCTCACAGTTACTTTCCAACAAACATTCATTTGTCTGTGTaGTCTGGGACATGGTGGATC +
Preference number: 4 (lower is better)
Translates to: SLREMDGKLGSHSYFPTNIHLSV*SGTWWI
Trigger: GATCCACCATGTCCCAGAGCACACAGACAAATGAAT...GTTTGTTGGAAAGTAACTGTGAGAACCCAGTTTCCCGTCCATCTCCCTTAGGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264731.8
CDS-3UTR GCA 90 bp CTCTTTGATGCGCTGTTGCTTATTGCGGCGAGCATCCATGTCAAAGTTGAAGTCATTCATTTGTCTGTGTaGTCTGGGACATGGTGGATC +
Preference number: 4 (lower is better)
Translates to: LFDALLLIAASIHVKVEVIHLSV*SGTWWI
Trigger: GATCCACCATGTCCCAGAGCACACAGACAAATGAAT...GACTTCAACTTTGACATGGATGCTCGCCGCAATAAGCAACAGCGCATCAAAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320472.9
CDS-3UTR GCA 90 bp CCTTTGAGCAGTTGGGTCTCTGAGCCAAAGTGTCTTCAAGTCCTGTTTATGAGGATTCATTTGTCTGTGTaGTCTGGGACATGGTGGATC +
Preference number: 4 (lower is better)
Translates to: PLSSWVSEPKCLQVLFMRIHLSV*SGTWWI
Trigger: GATCCACCATGTCCCAGAGCACACAGACAAATGAAT...CCTCATAAACAGGACTTGAAGACACTTTGGCTCAGAGACCCAACTGCTCAAAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418709.6
CDS-3UTR GCA 90 bp CTGCCCAGCAGTACACTTGACACCTTCGTTTCTTACTACTTGCAATATTATTACGAATCTGCTGGTCCATaGTGTTCAGGAGCCCCAGGT +
Preference number: 4 (lower is better)
Translates to: LPSSTLDTFVSYYLQYYYESAGP*CSGAPG
Trigger: ACCTGGGGCTCCTGAACAGCATGGACCAGCAGATTC...GTAATAATATTGCAAGTAGTAAGAAACGAAGGTGTCAAGTGTACTGCTGGGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418709.6
ENST00000437221.5
CDS-3UTR GCA 90 bp CCCTTTCAATCTTTAATTTCCAGTCCAGGAGTGCTGATTTTAACACGTCTGCTTTTGGCGGTGCTCGACTaGTGGAAGGACACGTCGAAA +
Preference number: 4 (lower is better)
Translates to: PFQSLISSPGVLILTRLLLAVLD*WKDTSK
Trigger: TTTCGACGTGTCCTTCCAGCAGTCGAGCACCGCCAA...AAGCAGACGTGTTAAAATCAGCACTCCTGGACTGGAAATTAAAGATTGAAAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418709.6
ENST00000437221.5
CDS-3UTR GCA 90 bp GCTTGGATCTCACTTACTCAAAACGTAAGTCTCCTGGCTAAATGCACTGAACAGTGGTGCTGCTGCTGTTaGTGTTGCCTGTACGTTTCA +
Preference number: 4 (lower is better)
Translates to: AWISLTQNVSLLAKCTEQWCCCC*CCLYVS
Trigger: TGAAACGTACAGGCAACAGCAACAGCAGCAGCACCA...CTGTTCAGTGCATTTAGCCAGGAGACTTACGTTTTGAGTAAGTGAGATCCAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418709.6
ENST00000437221.5
CDS-3UTR GCA 90 bp CACTTTCTAGTGGTTTCTATGCTTACTATCCTTTTACCCCTTACCCTGGCTACTCCATTGGCATGTGGGTaGCCATCATGGGAATGTTGG +
Preference number: 4 (lower is better)
Translates to: HFLVVSMLTILLPLTLATPLACG*PSWECW
Trigger: CCAACATTCCCATGATGGGCACCCACATGCCAATGG...AGTAGCCAGGGTAAGGGGTAAAAGGATAGTAAGCATAGAAACCACTAGAAAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264731.8
ENST00000354600.10
CDS-3UTR GCA 90 bp CCTTTGAGCAGTTGGGTCTCTGAGCCAAAGTGTCTTCAAGTCCTGTTTATGAGGCAAAATGAGTTCACCTaGTATGGGGGCCAAACAACA +
Preference number: 4 (lower is better)
Translates to: PLSSWVSEPKCLQVLFMRQNEFT*YGGQTT
Trigger: TGTTGTTTGGCCCCCATAGCAGGTGAACTCATTTTG...CCTCATAAACAGGACTTGAAGACACTTTGGCTCAGAGACCCAACTGCTCAAAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000418709.6
ENST00000437221.5
CDS-3UTR CCA 90 bp GCTTGGATCTCACTTACTCAAAACGTAAGTCTCCTGGCTAAATGCACTGAACAGGGCAGTACTGTAGGGTaGCACACCGTGAAGTTTCAA +
Preference number: 4 (lower is better)
Translates to: AWISLTQNVSLLAKCTEQGSTVG*HTVKFQ
Trigger: TTGAAACTTCACGGTGTGCCACCCTACAGTACTGCC...CTGTTCAGTGCATTTAGCCAGGAGACTTACGTTTTGAGTAAGTGAGATCCAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418709.6
CDS-3UTR CCA 90 bp CCTTTGAGCAGTTGGGTCTCTGAGCCAAAGTGTCTTCAAGTCCTGTTTATGAGGAAATCCCAGATATGCTaGAAAACCTCTGGACTGAGG +
Preference number: 4 (lower is better)
Translates to: PLSSWVSEPKCLQVLFMRKSQIC*KTSGLR
Trigger: CCTCAGTCCAGAGGTTTTCCAGCATATCTGGGATTT...CCTCATAAACAGGACTTGAAGACACTTTGGCTCAGAGACCCAACTGCTCAAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418709.6
CDS-3UTR CCA 90 bp GCTTGGATCTCACTTACTCAAAACGTAAGTCTCCTGGCTAAATGCACTGAACAGTGTTATAGGGACTGGTaGACGAGGAGCCGTTCTGAA +
Preference number: 4 (lower is better)
Translates to: AWISLTQNVSLLAKCTEQCYRDW*TRSRSE
Trigger: TTCAGAACGGCTCCTCGTCCACCAGTCCCTATAACA...CTGTTCAGTGCATTTAGCCAGGAGACTTACGTTTTGAGTAAGTGAGATCCAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418709.6
ENST00000437221.5
CDS-3UTR CCA 90 bp AGCTCTAGATACCTATCACCATACATGATACCCCTTAAGGGAAGGAGTATAGACCTGTGTTATAGGGACTaGTGGACGAGGAGCCGTTCT +
Preference number: 4 (lower is better)
Translates to: SSRYLSPYMIPLKGRSIDLCYRD*WTRSRS
Trigger: AGAACGGCTCCTCGTCCACCAGTCCCTATAACACAG...GTCTATACTCCTTCCCTTAAGGGGTATCATGTATGGTGATAGGTATCTAGAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264731.8
ENST00000354600.10
CDS-3UTR CCA 90 bp AAGGTAAACAAGCCTCTACATGCAGAGTTTTATAGAATAGGAGGGTCTTTAAAATCCAGGTGGCCGACTTaGCGGTGCTCGACTGCTGGA +
Preference number: 4 (lower is better)
Translates to: KVNKPLHAEFYRIGGSLKSRWPT*RCSTAG
Trigger: TCCAGCAGTCGAGCACCGCCAAGTCGGCCACCTGGA...TTTTAAAGACCCTCCTATTCTATAAAACTCTGCATGTAGAGGCTTGTTTACCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264731.8
ENST00000354600.10
CDS-3UTR CCA 90 bp GCTTGGATCTCACTTACTCAAAACGTAAGTCTCCTGGCTAAATGCACTGAACAGGGATCTTCTACATACTaGGCATGGCTGTTCCCCTCT +
Preference number: 4 (lower is better)
Translates to: AWISLTQNVSLLAKCTEQGSSTY*AWLFPS
Trigger: AGAGGGGAACAGCCATGCCCAGTATGTAGAAGATCC...CTGTTCAGTGCATTTAGCCAGGAGACTTACGTTTTGAGTAAGTGAGATCCAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418709.6
ENST00000437221.5
CDS-3UTR CCA 90 bp CACTTTCTAGTGGTTTCTATGCTTACTATCCTTTTACCCCTTACCCTGGCTACTCATGTCTCCAGCCATTaGCATGTGGGTGCCCATCAT +
Preference number: 4 (lower is better)
Translates to: HFLVVSMLTILLPLTLATHVSSH*HVGAHH
Trigger: ATGATGGGCACCCACATGCCAATGGCTGGAGACATG...AGTAGCCAGGGTAAGGGGTAAAAGGATAGTAAGCATAGAAACCACTAGAAAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264731.8
ENST00000354600.10
CDS-3UTR CCA 90 bp AGCTCTAGATACCTATCACCATACATGATACCCCTTAAGGGAAGGAGTATAGACCATGTCTCCAGCCATTaGCATGTGGGTGCCCATCAT +
Preference number: 4 (lower is better)
Translates to: SSRYLSPYMIPLKGRSIDHVSSH*HVGAHH
Trigger: ATGATGGGCACCCACATGCCAATGGCTGGAGACATG...GTCTATACTCCTTCCCTTAAGGGGTATCATGTATGGTGATAGGTATCTAGAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264731.8
ENST00000354600.10
CDS-3UTR CCA 90 bp CAAAAACTTTTCAATTCTTCAGCTAACTGCATTGAGCTGAGGCCACAAGAACTCGCTCAATCTGATAGATaGTGGTCAGCCCCTGGGTCG +
Preference number: 4 (lower is better)
Translates to: QKLFNSSANCIELRPQELAQSDR*WSAPGS
Trigger: CGACCCAGGGGCTGACCACCATCTATCAGATTGAGC...GAGTTCTTGTGGCCTCAGCTCAATGCAGTTAGCTGAAGAATTGAAAAGTTTTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000264731.8
ENST00000354600.10
CDS-3UTR CCA 90 bp AGAGGTAGCCTCTTACTTCTCCTTCCCCTAAGAAATCAGACAAGAGGAAGGGGAAGATGGACGGGAAACTaGGTTCTCACAGTTACTTTC +
Preference number: 4 (lower is better)
Translates to: RGSLLLLLPLRNQTRGRGRWTGN*VLTVTF
Trigger: GAAAGTAACTGTGAGAACCCAGTTTCCCGTCCATCT...TCCCCTTCCTCTTGTCTGATTTCTTAGGGGAAGGAGAAGTAAGAGGCTACCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264731.8
ENST00000354600.10
CDS-3UTR CCA 90 bp TCCCTAAGGGAGATGGACGGGAAACTGGGTTCTCACAGTTACTTTCCAACAAACGACCTTTCATGTCTATaGGTAGTCCCTAAGGGAGAT +
Preference number: 4 (lower is better)
Translates to: SLREMDGKLGSHSYFPTNDLSCL*VVPKGD
Trigger: ATCTCCCTTAGGGACTACCCATAGACATGAAAGGTC...GTTTGTTGGAAAGTAACTGTGAGAACCCAGTTTCCCGTCCATCTCCCTTAGGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264731.8
ENST00000354600.10
CDS-3UTR CCA 90 bp CCAACATACAGTGGCAGAGGCAGGTACACAGCATTAAGAAATGTTCTACCTACAGACGTCAGATTGTTTTaGAGTTTCTCTCCGGGGCTC +
Preference number: 4 (lower is better)
Translates to: PTYSGRGRYTALRNVLPTDVRLF*SFSPGL
Trigger: GAGCCCCGGAGAGAAACTCCAAAACAATCTGACGTC...TGTAGGTAGAACATTTCTTAATGCTGTGTACCTGCCTCTGCCACTGTATGTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418709.6
ENST00000437221.5
CDS-3UTR TCA 90 bp AGAGGTAGCCTCTTACTTCTCCTTCCCCTAAGAAATCAGACAAGAGGAAGGGGATCTTTCCAAGAGAAATaGGCTGGGGTTTCTACGAAA +
Preference number: 4 (lower is better)
Translates to: RGSLLLLLPLRNQTRGRGSFQEK*AGVSTK
Trigger: TTTCGTAGAAACCCCAGCTCATTTCTCTTGGAAAGA...TCCCCTTCCTCTTGTCTGATTTCTTAGGGGAAGGAGAAGTAAGAGGCTACCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000264731.8
ENST00000320472.9
CDS-3UTR TCA 90 bp ACAGTGGTTCCTCACCCACCAATGGCCGGTCTAAGGATACAAAATCTGCAGAAATTCAAGTCAATGGGCTaGACTGAACATATAGGCTGT +
Preference number: 4 (lower is better)
Translates to: TVVPHPPMAGLRIQNLQKFKSMG*TEHIGC
Trigger: ACAGCCTATATGTTCAGTTCAGCCCATTGACTTGAA...TTTCTGCAGATTTTGTATCCTTAGACCGGCCATTGGTGGGTGAGGAACCACTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418709.6
CDS-3UTR TCA 90 bp AAGGTAAACAAGCCTCTACATGCAGAGTTTTATAGAATAGGAGGGTCTTTAAAACGGATAACAGCTCCCTaGGGAGGTGGGGTCATCACC +
Preference number: 4 (lower is better)
Translates to: KVNKPLHAEFYRIGGSLKRITAP*GGGVIT
Trigger: GGTGATGACCCCACCTCCTCAGGGAGCTGTTATCCG...TTTTAAAGACCCTCCTATTCTATAAAACTCTGCATGTAGAGGCTTGTTTACCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000264731.8
ENST00000354600.10
CDS-3UTR TCA 90 bp TTGATGCGCTGTTGCTTATTGCGGCGAGCATCCATGTCAAAGTTGAAGTCATTCCACTCTGTCTTCCTGTaGTGGGATCTTCTACATACT +
Preference number: 4 (lower is better)
Translates to: LMRCCLLRRASMSKLKSFHSVFL*WDLLHT
Trigger: AGTATGTAGAAGATCCCATCACAGGAAGACAGAGTG...GAATGACTTCAACTTTGACATGGATGCTCGCCGCAATAAGCAACAGCGCATCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320472.9
CDS-3UTR TCA 90 bp CGCTGCCCAGCAGTACACTTGACACCTTCGTTTCTTACTACTTGCAATATTATTTGTACAAGACTGTCGTaGATTCAGTGCCAACCTGGG +
Preference number: 4 (lower is better)
Translates to: RCPAVHLTPSFLTTCNIICTRLS*IQCQPG
Trigger: CCCAGGTTGGCACTGAATTCACGACAGTCTTGTACA...AATAATATTGCAAGTAGTAAGAAACGAAGGTGTCAAGTGTACTGCTGGGCAGCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418709.6
ENST00000437221.5
CDS-3UTR TCA 90 bp AGCTCTAGATACCTATCACCATACATGATACCCCTTAAGGGAAGGAGTATAGACATACCATGTGTGTTCTaGCGAAACGGGCGCTTCGTA +
Preference number: 4 (lower is better)
Translates to: SSRYLSPYMIPLKGRSIDIPCVF*RNGRFV
Trigger: TACGAAGCGCCCGTTTCGTCAGAACACACATGGTAT...GTCTATACTCCTTCCCTTAAGGGGTATCATGTATGGTGATAGGTATCTAGAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264731.8
ENST00000354600.10
CDS-3UTR TCA 90 bp TCTTTAATTTCCAGTCCAGGAGTGCTGATTTTAACACGTCTGCTTGGATCTCACATACCATGTGTGTTCTaGCGAAACGGGCGCTTCGTA +
Preference number: 4 (lower is better)
Translates to: SLISSPGVLILTRLLGSHIPCVF*RNGRFV
Trigger: TACGAAGCGCCCGTTTCGTCAGAACACACATGGTAT...GTGAGATCCAAGCAGACGTGTTAAAATCAGCACTCCTGGACTGGAAATTAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418709.6
ENST00000437221.5
CDS-3UTR TCA 90 bp TCCCTAAGGGAGATGGACGGGAAACTGGGTTCTCACAGTTACTTTCCAACAAACCATCCATGTCAAAGTTaGAGTCATTCCACTCATCTC +
Preference number: 4 (lower is better)
Translates to: SLREMDGKLGSHSYFPTNHPCQS*SHSTHL
Trigger: GAGATGAGTGGAATGACTTCAACTTTGACATGGATG...GTTTGTTGGAAAGTAACTGTGAGAACCCAGTTTCCCGTCCATCTCCCTTAGGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264731.8
ENST00000354600.10
CDS-3UTR TCA 90 bp GTAAGAGGTAGCCTCTTACTTCTCCTTCCCCTAAGAAATCAGACAAGAGGAAGGACCTATCACCATACATaGTACCCCTTAAGGGAAGGA +
Preference number: 4 (lower is better)
Translates to: VRGSLLLLLPLRNQTRGRTYHHT*YPLREG
Trigger: TCCTTCCCTTAAGGGGTATCATGTATGGTGATAGGT...CCTTCCTCTTGTCTGATTTCTTAGGGGAAGGAGAAGTAAGAGGCTACCTCTTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264731.8
ENST00000354600.10
CDS-3UTR TCA 90 bp AGAGGTAGCCTCTTACTTCTCCTTCCCCTAAGAAATCAGACAAGAGGAAGGGGAGAGGACGTTTGGACATaGACTTCTTCTTATAACTGG +
Preference number: 4 (lower is better)
Translates to: RGSLLLLLPLRNQTRGRGEDVWT*TSSYNW
Trigger: CCAGTTATAAGAAGAAGTTCATGTCCAAACGTCCTC...TCCCCTTCCTCTTGTCTGATTTCTTAGGGGAAGGAGAAGTAAGAGGCTACCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264731.8
ENST00000354600.10
CDS-3UTR TCA 90 bp TTCTTCCCCTTAATGGGTTTGCAAAGCTGCATGCTTGTTGCAGAAGTTTACAGTTGCAATGACAGCCCTTaGCCAGAATGCATGGGAAGA +
Preference number: 4 (lower is better)
Translates to: FFPLMGLQSCMLVAEVYSCNDSP*PECMGR
Trigger: TCTTCCCATGCATTCTGGTCAAGGGCTGTCATTGCA...ACTGTAAACTTCTGCAACAAGCATGCAGCTTTGCAAACCCATTAAGGGGAAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264731.8
ENST00000354600.10
CDS-3UTR TCA 90 bp TCCCTAAGGGAGATGGACGGGAAACTGGGTTCTCACAGTTACTTTCCAACAAACCTAGTGCCAAATCCATaGGACACAGTACAGGAATTT +
Preference number: 4 (lower is better)
Translates to: SLREMDGKLGSHSYFPTNLVPNP*DTVQEF
Trigger: AAATTCCTGTACTGTGTCTCATGGATTTGGCACTAG...GTTTGTTGGAAAGTAACTGTGAGAACCCAGTTTCCCGTCCATCTCCCTTAGGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264731.8
ENST00000354600.10
CDS-3UTR TCA 90 bp CCAACATACAGTGGCAGAGGCAGGTACACAGCATTAAGAAATGTTCTACCTACAGCCCAGCAGTACACTTaGCACCTTCGTTTCTTACTA +
Preference number: 4 (lower is better)
Translates to: PTYSGRGRYTALRNVLPTAQQYT*HLRFLL
Trigger: TAGTAAGAAACGAAGGTGTCAAGTGTACTGCTGGGC...TGTAGGTAGAACATTTCTTAATGCTGTGTACCTGCCTCTGCCACTGTATGTTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418709.6
ENST00000437221.5
CDS-3UTR TCA 90 bp ACAGTGGTTCCTCACCCACCAATGGCCGGTCTAAGGATACAAAATCTGCAGAAATGTTCTACCTACACATaGGGGGAGGACACAAATAAT +
Preference number: 4 (lower is better)
Translates to: TVVPHPPMAGLRIQNLQKCSTYT*GEDTNN
Trigger: ATTATTTGTGTCCTCCCCTCATGTGTAGGTAGAACA...TTTCTGCAGATTTTGTATCCTTAGACCGGCCATTGGTGGGTGAGGAACCACTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000418709.6
ENST00000437221.5
CDS-3UTR GCA 90 bp AAGGTAAACAAGCCTCTACATGCAGAGTTTTATAGAATAGGAGGGTCTTTAAAATGGCCGACTTGGCGGTaGTCGACTGCTGGAAGGACA +
Preference number: 4 (lower is better)
Translates to: KVNKPLHAEFYRIGGSLKWPTWR*STAGRT
Trigger: TGTCCTTCCAGCAGTCGAGCACCGCCAAGTCGGCCA...TTTTAAAGACCCTCCTATTCTATAAAACTCTGCATGTAGAGGCTTGTTTACCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264731.8
ENST00000354600.10
CDS-3UTR GCA 90 bp ACAGTGGTTCCTCACCCACCAATGGCCGGTCTAAGGATACAAAATCTGCAGAAACTGTCCGAAACTTGCTaGTTTCTGATGCTATCTTCA +
Preference number: 4 (lower is better)
Translates to: TVVPHPPMAGLRIQNLQKLSETC*FLMLSS
Trigger: TGAAGATAGCATCAGAAAGCAGCAAGTTTCGGACAG...TTTCTGCAGATTTTGTATCCTTAGACCGGCCATTGGTGGGTGAGGAACCACTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418709.6
ENST00000437221.5
CDS-3UTR GCA 90 bp CCTTTGAGCAGTTGGGTCTCTGAGCCAAAGTGTCTTCAAGTCCTGTTTATGAGGGTACTGTCCGAAACTTaGTGCTTTCTGATGCTATCT +
Preference number: 4 (lower is better)
Translates to: PLSSWVSEPKCLQVLFMRVLSET*CFLMLS
Trigger: AGATAGCATCAGAAAGCAGCAAGTTTCGGACAGTAC...CCTCATAAACAGGACTTGAAGACACTTTGGCTCAGAGACCCAACTGCTCAAAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418709.6
ENST00000437221.5
CDS-3UTR GCA 90 bp AGCTCTAGATACCTATCACCATACATGATACCCCTTAAGGGAAGGAGTATAGACTGGTGCTGCTGCTGTTaGTGTTGCCTGTACGTTTCA +
Preference number: 4 (lower is better)
Translates to: SSRYLSPYMIPLKGRSIDWCCCC*CCLYVS
Trigger: TGAAACGTACAGGCAACAGCAACAGCAGCAGCACCA...GTCTATACTCCTTCCCTTAAGGGGTATCATGTATGGTGATAGGTATCTAGAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264731.8
ENST00000354600.10
CDS-3UTR GCA 90 bp TTCTTCCCCTTAATGGGTTTGCAAAGCTGCATGCTTGTTGCAGAAGTTTACAGTTGGTGCTGCTGCTGTTaGTGTTGCCTGTACGTTTCA +
Preference number: 4 (lower is better)
Translates to: FFPLMGLQSCMLVAEVYSWCCCC*CCLYVS
Trigger: TGAAACGTACAGGCAACAGCAACAGCAGCAGCACCA...ACTGTAAACTTCTGCAACAAGCATGCAGCTTTGCAAACCCATTAAGGGGAAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264731.8
ENST00000354600.10
CDS-3UTR GCA 90 bp TTCTTCCCCTTAATGGGTTTGCAAAGCTGCATGCTTGTTGCAGAAGTTTACAGTTCTTTGATGCGCTGTTaGTTATTGCGGCGAGCATCC +
Preference number: 4 (lower is better)
Translates to: FFPLMGLQSCMLVAEVYSSLMRC*LLRRAS
Trigger: GGATGCTCGCCGCAATAAGCAACAGCGCATCAAAGA...ACTGTAAACTTCTGCAACAAGCATGCAGCTTTGCAAACCCATTAAGGGGAAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264731.8
ENST00000354600.10
CDS-3UTR GCA 90 bp CACTTTCTAGTGGTTTCTATGCTTACTATCCTTTTACCCCTTACCCTGGCTACTTCTTTGATGCGCTGTTaGTTATTGCGGCGAGCATCC +
Preference number: 4 (lower is better)
Translates to: HFLVVSMLTILLPLTLATSLMRC*LLRRAS
Trigger: GGATGCTCGCCGCAATAAGCAACAGCGCATCAAAGA...AGTAGCCAGGGTAAGGGGTAAAAGGATAGTAAGCATAGAAACCACTAGAAAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264731.8
ENST00000354600.10
CDS-3UTR GCA 90 bp AGAGGTAGCCTCTTACTTCTCCTTCCCCTAAGAAATCAGACAAGAGGAAGGGGAGAAAGACTTATCTCTTaGTCTGTGGGGACCTTTCAT +
Preference number: 4 (lower is better)
Translates to: RGSLLLLLPLRNQTRGRGERLIS*SVGTFH
Trigger: ATGAAAGGTCCCCACAGAGCAAGAGATAAGTCTTTC...TCCCCTTCCTCTTGTCTGATTTCTTAGGGGAAGGAGAAGTAAGAGGCTACCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000264731.8
ENST00000354600.10
CDS-3UTR GCA 90 bp AGAGGTAGCCTCTTACTTCTCCTTCCCCTAAGAAATCAGACAAGAGGAAGGGGAAATTCTTCAGCTAACTaGATTGAGCTGAGGCCACAA +
Preference number: 4 (lower is better)
Translates to: RGSLLLLLPLRNQTRGRGNSSAN*IELRPQ
Trigger: TTGTGGCCTCAGCTCAATGCAGTTAGCTGAAGAATT...TCCCCTTCCTCTTGTCTGATTTCTTAGGGGAAGGAGAAGTAAGAGGCTACCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264731.8
ENST00000354600.10
CDS-3UTR CCA 90 bp AGAGGTAGCCTCTTACTTCTCCTTCCCCTAAGAAATCAGACAAGAGGAAGGGGATGCTCTGGGACATGGTaGATCGGTAATAACTTTCTT +
Preference number: 4 (lower is better)
Translates to: RGSLLLLLPLRNQTRGRGCSGTW*IGNNFL
Trigger: AAGAAAGTTATTACCGATCCACCATGTCCCAGAGCA...TCCCCTTCCTCTTGTCTGATTTCTTAGGGGAAGGAGAAGTAAGAGGCTACCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264731.8
ENST00000320472.9
CDS-3UTR CCA 90 bp TTGATGCGCTGTTGCTTATTGCGGCGAGCATCCATGTCAAAGTTGAAGTCATTCGTGTGCTCTGGGACATaGTGGATCGGTAATAACTTT +
Preference number: 4 (lower is better)
Translates to: LMRCCLLRRASMSKLKSFVCSGT*WIGNNF
Trigger: AAAGTTATTACCGATCCACCATGTCCCAGAGCACAC...GAATGACTTCAACTTTGACATGGATGCTCGCCGCAATAAGCAACAGCGCATCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320472.9
CDS-3UTR CCA 90 bp GTAAGAGGTAGCCTCTTACTTCTCCTTCCCCTAAGAAATCAGACAAGAGGAAGGAAATCCCAGATATGCTaGAAAACCTCTGGACTGAGG +
Preference number: 4 (lower is better)
Translates to: VRGSLLLLLPLRNQTRGRKSQIC*KTSGLR
Trigger: CCTCAGTCCAGAGGTTTTCCAGCATATCTGGGATTT...CCTTCCTCTTGTCTGATTTCTTAGGGGAAGGAGAAGTAAGAGGCTACCTCTTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264731.8
ENST00000320472.9
CDS-3UTR CCA 90 bp TTCTTCCCCTTAATGGGTTTGCAAAGCTGCATGCTTGTTGCAGAAGTTTACAGTTGTTATAGGGACTGGTaGACGAGGAGCCGTTCTGAA +
Preference number: 4 (lower is better)
Translates to: FFPLMGLQSCMLVAEVYSCYRDW*TRSRSE
Trigger: TTCAGAACGGCTCCTCGTCCACCAGTCCCTATAACA...ACTGTAAACTTCTGCAACAAGCATGCAGCTTTGCAAACCCATTAAGGGGAAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264731.8
ENST00000354600.10
CDS-3UTR CCA 90 bp AAGGTAAACAAGCCTCTACATGCAGAGTTTTATAGAATAGGAGGGTCTTTAAAATGGAATACGTCCAGGTaGCCGACTTGGCGGTGCTCG +
Preference number: 4 (lower is better)
Translates to: KVNKPLHAEFYRIGGSLKWNTSR*PTWRCS
Trigger: CGAGCACCGCCAAGTCGGCCACCTGGACGTATTCCA...TTTTAAAGACCCTCCTATTCTATAAAACTCTGCATGTAGAGGCTTGTTTACCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264731.8
ENST00000354600.10
CDS-3UTR CCA 90 bp AAGGTAAACAAGCCTCTACATGCAGAGTTTTATAGAATAGGAGGGTCTTTAAAAGGCTCAGCTCATGGTTaGGGCACCGCTTCACCACCT +
Preference number: 4 (lower is better)
Translates to: KVNKPLHAEFYRIGGSLKGSAHG*GTASPP
Trigger: AGGTGGTGAAGCGGTGCCCCAACCATGAGCTGAGCC...TTTTAAAGACCCTCCTATTCTATAAAACTCTGCATGTAGAGGCTTGTTTACCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264731.8
ENST00000354600.10
CDS-3UTR CCA 90 bp TTCTTCCCCTTAATGGGTTTGCAAAGCTGCATGCTTGTTGCAGAAGTTTACAGTGGATCTTCTACATACTaGGCATGGCTGTTCCCCTCT +
Preference number: 4 (lower is better)
Translates to: FFPLMGLQSCMLVAEVYSGSSTY*AWLFPS
Trigger: AGAGGGGAACAGCCATGCCCAGTATGTAGAAGATCC...ACTGTAAACTTCTGCAACAAGCATGCAGCTTTGCAAACCCATTAAGGGGAAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264731.8
ENST00000354600.10
CDS-3UTR CCA 90 bp AGCTCTAGATACCTATCACCATACATGATACCCCTTAAGGGAAGGAGTATAGACCCATCATGGGAATGTTaGCTCCCATGCCATCAGGAA +
Preference number: 4 (lower is better)
Translates to: SSRYLSPYMIPLKGRSIDPSWEC*LPCHQE
Trigger: TTCCTGATGGCATGGGAGCCAACATTCCCATGATGG...GTCTATACTCCTTCCCTTAAGGGGTATCATGTATGGTGATAGGTATCTAGAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264731.8
ENST00000354600.10
CDS-3UTR CCA 90 bp TCCCTAAGGGAGATGGACGGGAAACTGGGTTCTCACAGTTACTTTCCAACAAACTTTCAAGTGTGGTTCTaGAAATCCCACTATCCCAAG +
Preference number: 4 (lower is better)
Translates to: SLREMDGKLGSHSYFPTNFQVWF*KSHYPK
Trigger: CTTGGGATAGTGGGATTTCCAGAACCACACTTGAAA...GTTTGTTGGAAAGTAACTGTGAGAACCCAGTTTCCCGTCCATCTCCCTTAGGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264731.8
ENST00000354600.10
CDS-3UTR CCA 90 bp AGAGGTAGCCTCTTACTTCTCCTTCCCCTAAGAAATCAGACAAGAGGAAGGGGATTTCAAGTGTGGTTCTaGAAATCCCACTATCCCAAG +
Preference number: 4 (lower is better)
Translates to: RGSLLLLLPLRNQTRGRGFQVWF*KSHYPK
Trigger: CTTGGGATAGTGGGATTTCCAGAACCACACTTGAAA...TCCCCTTCCTCTTGTCTGATTTCTTAGGGGAAGGAGAAGTAAGAGGCTACCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264731.8
ENST00000354600.10
CDS-3UTR CCA 90 bp AGAGGTAGCCTCTTACTTCTCCTTCCCCTAAGAAATCAGACAAGAGGAAGGGGAAAAGAGATTGTAGATTaGCTTCTGGCTCCCCAAAAG +
Preference number: 4 (lower is better)
Translates to: RGSLLLLLPLRNQTRGRGKEIVD*LLAPQK
Trigger: CTTTTGGGGAGCCAGAAGCCAATCTACAATCTCTTT...TCCCCTTCCTCTTGTCTGATTTCTTAGGGGAAGGAGAAGTAAGAGGCTACCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 2 transcripts:
ENST00000264731.8
ENST00000354600.10
CDS-3UTR CCA 90 bp TCTTTAATTTCCAGTCCAGGAGTGCTGATTTTAACACGTCTGCTTGGATCTCACGTGCCTTTGAGCAGTTaGGTCTCTGAGCCAAAGTGT +
Preference number: 4 (lower is better)
Translates to: SLISSPGVLILTRLLGSHVPLSS*VSEPKC
Trigger: ACACTTTGGCTCAGAGACCCAACTGCTCAAAGGCAC...GTGAGATCCAAGCAGACGTGTTAAAATCAGCACTCCTGGACTGGAAATTAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418709.6
ENST00000437221.5
CDS-3UTR CCA 90 bp CCCTTTCAATCTTTAATTTCCAGTCCAGGAGTGCTGATTTTAACACGTCTGCTTGATGCCAACATACAGTaGCAGAGGCAGGTACACAGC +
Preference number: 4 (lower is better)
Translates to: PFQSLISSPGVLILTRLLDANIQ*QRQVHS
Trigger: GCTGTGTACCTGCCTCTGCCACTGTATGTTGGCATC...AAGCAGACGTGTTAAAATCAGCACTCCTGGACTGGAAATTAAAGATTGAAAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418709.6
ENST00000437221.5
CDS-3UTR CCA 90 bp CTGCCCAGCAGTACACTTGACACCTTCGTTTCTTACTACTTGCAATATTATTACGATGCCAACATACAGTaGCAGAGGCAGGTACACAGC +
Preference number: 4 (lower is better)
Translates to: LPSSTLDTFVSYYLQYYYDANIQ*QRQVHS
Trigger: GCTGTGTACCTGCCTCTGCCACTGTATGTTGGCATC...GTAATAATATTGCAAGTAGTAAGAAACGAAGGTGTCAAGTGTACTGCTGGGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418709.6
ENST00000437221.5
CDS-3UTR CCA 90 bp CCAACATACAGTGGCAGAGGCAGGTACACAGCATTAAGAAATGTTCTACCTACACTGGGTGTGGGAAGATaGAGGGGAGGAACATTTTTA +
Preference number: 4 (lower is better)
Translates to: PTYSGRGRYTALRNVLPTLGVGR*RGGTFL
Trigger: TAAAAATGTTCCTCCCCTCCATCTTCCCACACCCAG...TGTAGGTAGAACATTTCTTAATGCTGTGTACCTGCCTCTGCCACTGTATGTTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000418709.6
ENST00000437221.5
CDS-3UTR TCA 90 bp AAGTGTCTTCAAGTCCTGTTTATGAGGGCTAGATACACACGCACACACATACACCACTCTGTCTTCCTGTaGTGGGATCTTCTACATACT +
Preference number: 4 (lower is better)
Translates to: KCLQVLFMRARYTRTHIHHSVFL*WDLLHT
Trigger: AGTATGTAGAAGATCCCATCACAGGAAGACAGAGTG...GTGTATGTGTGTGCGTGTGTATCTAGCCCTCATAAACAGGACTTGAAGACACTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418709.6
ENST00000437221.5
CDS-3UTR TCA 90 bp CAAAAACTTTTCAATTCTTCAGCTAACTGCATTGAGCTGAGGCCACAAGAACTCTGTACAAGACTGTCGTaGATTCAGTGCCAACCTGGG +
Preference number: 4 (lower is better)
Translates to: QKLFNSSANCIELRPQELCTRLS*IQCQPG
Trigger: CCCAGGTTGGCACTGAATTCACGACAGTCTTGTACA...GAGTTCTTGTGGCCTCAGCTCAATGCAGTTAGCTGAAGAATTGAAAAGTTTTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264731.8
ENST00000354600.10
CDS-3UTR TCA 90 bp TCCCTAAGGGAGATGGACGGGAAACTGGGTTCTCACAGTTACTTTCCAACAAACAACTGCTGTTACACATaGAATTGTACAAGACTGTCG +
Preference number: 4 (lower is better)
Translates to: SLREMDGKLGSHSYFPTNNCCYT*NCTRLS
Trigger: CGACAGTCTTGTACAATTTCATGTGTAACAGCAGTT...GTTTGTTGGAAAGTAACTGTGAGAACCCAGTTTCCCGTCCATCTCCCTTAGGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264731.8
ENST00000354600.10
CDS-3UTR TCA 90 bp ATGATCACCTCGCTGCCCAGCAGTACACTTGACACCTTCGTTTCTTACTACTTGAACTGCTGTTACACATaGAATTGTACAAGACTGTCG +
Preference number: 4 (lower is better)
Translates to: MITSLPSSTLDTFVSYYLNCCYT*NCTRLS
Trigger: CGACAGTCTTGTACAATTTCATGTGTAACAGCAGTT...CAAGTAGTAAGAAACGAAGGTGTCAAGTGTACTGCTGGGCAGCGAGGTGATCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418709.6
ENST00000437221.5
CDS-3UTR TCA 90 bp GTAAGAGGTAGCCTCTTACTTCTCCTTCCCCTAAGAAATCAGACAAGAGGAAGGCATCCATGTCAAAGTTaGAGTCATTCCACTCATCTC +
Preference number: 4 (lower is better)
Translates to: VRGSLLLLLPLRNQTRGRHPCQS*SHSTHL
Trigger: GAGATGAGTGGAATGACTTCAACTTTGACATGGATG...CCTTCCTCTTGTCTGATTTCTTAGGGGAAGGAGAAGTAAGAGGCTACCTCTTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264731.8
ENST00000320472.9
ENST00000354600.10
CDS-3UTR TCA 90 bp TCTTTAATTTCCAGTCCAGGAGTGCTGATTTTAACACGTCTGCTTGGATCTCACGAAAGGAGATGTTTCTaGAGTAAGTGCTGGTGCTGC +
Preference number: 4 (lower is better)
Translates to: SLISSPGVLILTRLLGSHERRCF*SKCWCC
Trigger: GCAGCACCAGCACTTACTTCAGAAACATCTCCTTTC...GTGAGATCCAAGCAGACGTGTTAAAATCAGCACTCCTGGACTGGAAATTAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418709.6
ENST00000437221.5
CDS-3UTR TCA 90 bp CCAACATACAGTGGCAGAGGCAGGTACACAGCATTAAGAAATGTTCTACCTACAATTCCTGAAGCAGGCTaGAAGGAGATGTTTCTGAAG +
Preference number: 4 (lower is better)
Translates to: PTYSGRGRYTALRNVLPTIPEAG*KEMFLK
Trigger: CTTCAGAAACATCTCCTTTCAGCCTGCTTCAGGAAT...TGTAGGTAGAACATTTCTTAATGCTGTGTACCTGCCTCTGCCACTGTATGTTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418709.6
ENST00000437221.5
CDS-3UTR TCA 90 bp TCTGCAGAAAACATCCTTTCTTGTAAAGGTTTGAGTCCCTTCAAAAGATTCTCTGCTCTATGGGTACACTaGTCGGTTTGGGGGCTTGGA +
Preference number: 4 (lower is better)
Translates to: SAENILSCKGLSPFKRFSALWVH*SVWGLG
Trigger: TCCAAGCCCCCAAACCGATCAGTGTACCCATAGAGC...AGAGAATCTTTTGAAGGGACTCAAACCTTTACAAGAAAGGATGTTTTCTGCAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000418709.6
ENST00000437221.5
CDS-3UTR TCA 90 bp CCAACATACAGTGGCAGAGGCAGGTACACAGCATTAAGAAATGTTCTACCTACATTCAAGTCCTGTTTATaGGGGCTAGATACACACGCA +
Preference number: 4 (lower is better)
Translates to: PTYSGRGRYTALRNVLPTFKSCL*GLDTHA
Trigger: TGCGTGTGTATCTAGCCCTCATAAACAGGACTTGAA...TGTAGGTAGAACATTTCTTAATGCTGTGTACCTGCCTCTGCCACTGTATGTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418709.6
ENST00000437221.5
CDS-3UTR TCA 90 bp ATGATCACCTCGCTGCCCAGCAGTACACTTGACACCTTCGTTTCTTACTACTTGCTCCACCCACAAAGTTaGTTACTTTTGGTAATGATC +
Preference number: 4 (lower is better)
Translates to: MITSLPSSTLDTFVSYYLLHPQS*LLLVMI
Trigger: GATCATTACCAAAAGTAATCAACTTTGTGGGTGGAG...CAAGTAGTAAGAAACGAAGGTGTCAAGTGTACTGCTGGGCAGCGAGGTGATCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418709.6
ENST00000437221.5
CDS-3UTR TCA 90 bp ACAGTGGTTCCTCACCCACCAATGGCCGGTCTAAGGATACAAAATCTGCAGAAAAAATCATTGTCTTGGTaGCAGAAAATACAGTGCTGG +
Preference number: 4 (lower is better)
Translates to: TVVPHPPMAGLRIQNLQKKSLSW*QKIQCW
Trigger: CCAGCACTGTATTTTCTGTCACCAAGACAATGATTT...TTTCTGCAGATTTTGTATCCTTAGACCGGCCATTGGTGGGTGAGGAACCACTGT
44% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000418709.6
ENST00000437221.5
CDS-3UTR GCA 90 bp CAAAAACTTTTCAATTCTTCAGCTAACTGCATTGAGCTGAGGCCACAAGAACTCTGCGCTGTTGCTTATTaGGGCGAGCATCCATGTCAA +
Preference number: 4 (lower is better)
Translates to: QKLFNSSANCIELRPQELCAVAY*GEHPCQ
Trigger: TTGACATGGATGCTCGCCGCAATAAGCAACAGCGCA...GAGTTCTTGTGGCCTCAGCTCAATGCAGTTAGCTGAAGAATTGAAAAGTTTTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264731.8
ENST00000354600.10
CDS-3UTR GCA 90 bp GTAAGAGGTAGCCTCTTACTTCTCCTTCCCCTAAGAAATCAGACAAGAGGAAGGTCAATGAGAAATCTCTaGAGCTTAAGGAGACACCCA +
Preference number: 4 (lower is better)
Translates to: VRGSLLLLLPLRNQTRGRSMRNL*SLRRHP
Trigger: TGGGTGTCTCCTTAAGCTGCAGAGATTTCTCATTGA...CCTTCCTCTTGTCTGATTTCTTAGGGGAAGGAGAAGTAAGAGGCTACCTCTTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264731.8
ENST00000354600.10
CDS-3UTR GCA 90 bp AGAGGTAGCCTCTTACTTCTCCTTCCCCTAAGAAATCAGACAAGAGGAAGGGGAAAGCTGCATGCTTGTTaGAGAAGTTTACAGTGCTTA +
Preference number: 4 (lower is better)
Translates to: RGSLLLLLPLRNQTRGRGKLHAC*RSLQCL
Trigger: TAAGCACTGTAAACTTCTGCAACAAGCATGCAGCTT...TCCCCTTCCTCTTGTCTGATTTCTTAGGGGAAGGAGAAGTAAGAGGCTACCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264731.8
ENST00000354600.10
CDS-3UTR GCA 90 bp CCAACATACAGTGGCAGAGGCAGGTACACAGCATTAAGAAATGTTCTACCTACACAAAATGAGTTCACCTaGTATGGGGGCCAAACAACA +
Preference number: 4 (lower is better)
Translates to: PTYSGRGRYTALRNVLPTQNEFT*YGGQTT
Trigger: TGTTGTTTGGCCCCCATAGCAGGTGAACTCATTTTG...TGTAGGTAGAACATTTCTTAATGCTGTGTACCTGCCTCTGCCACTGTATGTTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000418709.6
ENST00000437221.5
CDS-3UTR CCA 90 bp AGCTCTAGATACCTATCACCATACATGATACCCCTTAAGGGAAGGAGTATAGACCCAAGAGAAATGAGCTaGGGTTTCTACGAAACGCTG +
Preference number: 4 (lower is better)
Translates to: SSRYLSPYMIPLKGRSIDPREMS*GFYETL
Trigger: CAGCGTTTCGTAGAAACCCCAGCTCATTTCTCTTGG...GTCTATACTCCTTCCCTTAAGGGGTATCATGTATGGTGATAGGTATCTAGAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264731.8
CDS-3UTR CCA 90 bp CAAAAACTTTTCAATTCTTCAGCTAACTGCATTGAGCTGAGGCCACAAGAACTCTGTTATAGGGACTGGTaGACGAGGAGCCGTTCTGAA +
Preference number: 4 (lower is better)
Translates to: QKLFNSSANCIELRPQELCYRDW*TRSRSE
Trigger: TTCAGAACGGCTCCTCGTCCACCAGTCCCTATAACA...GAGTTCTTGTGGCCTCAGCTCAATGCAGTTAGCTGAAGAATTGAAAAGTTTTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264731.8
ENST00000354600.10
CDS-3UTR CCA 90 bp AAGGTAAACAAGCCTCTACATGCAGAGTTTTATAGAATAGGAGGGTCTTTAAAAGCGGTGCTCGACTGCTaGAAGGACACGTCGAAACTG +
Preference number: 4 (lower is better)
Translates to: KVNKPLHAEFYRIGGSLKAVLDC*KDTSKL
Trigger: CAGTTTCGACGTGTCCTTCCAGCAGTCGAGCACCGC...TTTTAAAGACCCTCCTATTCTATAAAACTCTGCATGTAGAGGCTTGTTTACCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264731.8
ENST00000354600.10
CDS-3UTR CCA 90 bp CTGCCCAGCAGTACACTTGACACCTTCGTTTCTTACTACTTGCAATATTATTACGTTTCTTCAGTTCAGTaGAATACGTCCAGGTGGCCG +
Preference number: 4 (lower is better)
Translates to: LPSSTLDTFVSYYLQYYYVSSVQ*NTSRWP
Trigger: CGGCCACCTGGACGTATTCCACTGAACTGAAGAAAC...GTAATAATATTGCAAGTAGTAAGAAACGAAGGTGTCAAGTGTACTGCTGGGCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418709.6
ENST00000437221.5
CDS-3UTR CCA 90 bp CAAAAACTTTTCAATTCTTCAGCTAACTGCATTGAGCTGAGGCCACAAGAACTCTCTACATACTGGGCATaGCTGTTCCCCTCTACTCGA +
Preference number: 4 (lower is better)
Translates to: QKLFNSSANCIELRPQELSTYWA*LFPSTR
Trigger: TCGAGTAGAGGGGAACAGCCATGCCCAGTATGTAGA...GAGTTCTTGTGGCCTCAGCTCAATGCAGTTAGCTGAAGAATTGAAAAGTTTTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000264731.8
ENST00000354600.10
CDS-3UTR CCA 90 bp CCCTTTCAATCTTTAATTTCCAGTCCAGGAGTGCTGATTTTAACACGTCTGCTTGGATCTTCTACATACTaGGCATGGCTGTTCCCCTCT +
Preference number: 4 (lower is better)
Translates to: PFQSLISSPGVLILTRLLGSSTY*AWLFPS
Trigger: AGAGGGGAACAGCCATGCCCAGTATGTAGAAGATCC...AAGCAGACGTGTTAAAATCAGCACTCCTGGACTGGAAATTAAAGATTGAAAGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418709.6
ENST00000437221.5
CDS-3UTR CCA 90 bp CAAAAACTTTTCAATTCTTCAGCTAACTGCATTGAGCTGAGGCCACAAGAACTCCCATCATGGGAATGTTaGCTCCCATGCCATCAGGAA +
Preference number: 4 (lower is better)
Translates to: QKLFNSSANCIELRPQELPSWEC*LPCHQE
Trigger: TTCCTGATGGCATGGGAGCCAACATTCCCATGATGG...GAGTTCTTGTGGCCTCAGCTCAATGCAGTTAGCTGAAGAATTGAAAAGTTTTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264731.8
ENST00000354600.10
CDS-3UTR CCA 90 bp TCCCTAAGGGAGATGGACGGGAAACTGGGTTCTCACAGTTACTTTCCAACAAACTTGCCAGATCATCCATaGAGTAATGCTCAATCTGAT +
Preference number: 4 (lower is better)
Translates to: SLREMDGKLGSHSYFPTNLPDHP*SNAQSD
Trigger: ATCAGATTGAGCATTACTCCATGGATGATCTGGCAA...GTTTGTTGGAAAGTAACTGTGAGAACCCAGTTTCCCGTCCATCTCCCTTAGGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264731.8
ENST00000354600.10
CDS-3UTR CCA 90 bp AAGGTAAACAAGCCTCTACATGCAGAGTTTTATAGAATAGGAGGGTCTTTAAAACCACTCATCTCGGGGTaGGAAAGAGATGGTCTGGCG +
Preference number: 4 (lower is better)
Translates to: KVNKPLHAEFYRIGGSLKPLISG*ERDGLA
Trigger: CGCCAGACCATCTCTTTCCCACCCCGAGATGAGTGG...TTTTAAAGACCCTCCTATTCTATAAAACTCTGCATGTAGAGGCTTGTTTACCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000264731.8
ENST00000354600.10
CDS-3UTR CCA 90 bp GTAAGAGGTAGCCTCTTACTTCTCCTTCCCCTAAGAAATCAGACAAGAGGAAGGCTTTTAGAGCCACGCTaGCCCTTTTGCACTTTAAAA +
Preference number: 4 (lower is better)
Translates to: VRGSLLLLLPLRNQTRGRLLEPR*PFCTLK
Trigger: TTTTAAAGTGCAAAAGGGCCAGCGTGGCTCTAAAAG...CCTTCCTCTTGTCTGATTTCTTAGGGGAAGGAGAAGTAAGAGGCTACCTCTTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000264731.8
ENST00000354600.10
CDS-3UTR CCA 90 bp TCTGCAGAAAACATCCTTTCTTGTAAAGGTTTGAGTCCCTTCAAAAGATTCTCTTACAGTGCTGGTGACTaGGTGTGGGAAGATGGAGGG +
Preference number: 4 (lower is better)
Translates to: SAENILSCKGLSPFKRFSYSAGD*VWEDGG
Trigger: CCCTCCATCTTCCCACACCCAGTCACCAGCACTGTA...AGAGAATCTTTTGAAGGGACTCAAACCTTTACAAGAAAGGATGTTTTCTGCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418709.6
ENST00000437221.5
CDS-3UTR TCA 90 bp CGCTGCCCAGCAGTACACTTGACACCTTCGTTTCTTACTACTTGCAATATTATTTGTCGCACCATCTTCTaGTGGTTCATCCACAAAGTT +
Preference number: 4 (lower is better)
Translates to: RCPAVHLTPSFLTTCNIICRTIF*WFIHKV
Trigger: AACTTTGTGGATGAACCATCAGAAGATGGTGCGACA...AATAATATTGCAAGTAGTAAGAAACGAAGGTGTCAAGTGTACTGCTGGGCAGCG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418709.6
CDS-3UTR TCA 90 bp CACTTTCTAGTGGTTTCTATGCTTACTATCCTTTTACCCCTTACCCTGGCTACTTCTACTCGAATCAAATaGCTAGGAGGGGCAATCTGT +
Preference number: 4 (lower is better)
Translates to: HFLVVSMLTILLPLTLATSTRIK*LGGAIC
Trigger: ACAGATTGCCCCTCCTAGTCATTTGATTCGAGTAGA...AGTAGCCAGGGTAAGGGGTAAAAGGATAGTAAGCATAGAAACCACTAGAAAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000264731.8
ENST00000354600.10
CDS-3UTR TCA 90 bp CGCTGCCCAGCAGTACACTTGACACCTTCGTTTCTTACTACTTGCAATATTATTTCTACTCGAATCAAATaGCTAGGAGGGGCAATCTGT +
Preference number: 4 (lower is better)
Translates to: RCPAVHLTPSFLTTCNIISTRIK*LGGAIC
Trigger: ACAGATTGCCCCTCCTAGTCATTTGATTCGAGTAGA...AATAATATTGCAAGTAGTAAGAAACGAAGGTGTCAAGTGTACTGCTGGGCAGCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418709.6
ENST00000437221.5
CDS-3UTR TCA 90 bp AGCTCTAGATACCTATCACCATACATGATACCCCTTAAGGGAAGGAGTATAGACCACTCTGTCTTCCTGTaGTGGGATCTTCTACATACT +
Preference number: 4 (lower is better)
Translates to: SSRYLSPYMIPLKGRSIDHSVFL*WDLLHT
Trigger: AGTATGTAGAAGATCCCATCACAGGAAGACAGAGTG...GTCTATACTCCTTCCCTTAAGGGGTATCATGTATGGTGATAGGTATCTAGAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264731.8
ENST00000354600.10
CDS-3UTR TCA 90 bp TTCTTCCCCTTAATGGGTTTGCAAAGCTGCATGCTTGTTGCAGAAGTTTACAGTGGGATCTTCGTTTCTTaGTGGATGTCATCTGGATAC +
Preference number: 4 (lower is better)
Translates to: FFPLMGLQSCMLVAEVYSGIFVS*WMSSGY
Trigger: GTATCCAGATGACATCCATCAAGAAACGAAGATCCC...ACTGTAAACTTCTGCAACAAGCATGCAGCTTTGCAAACCCATTAAGGGGAAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264731.8
ENST00000354600.10
CDS-3UTR TCA 90 bp CGCTGCCCAGCAGTACACTTGACACCTTCGTTTCTTACTACTTGCAATATTATTGGGATCTTCGTTTCTTaGTGGATGTCATCTGGATAC +
Preference number: 4 (lower is better)
Translates to: RCPAVHLTPSFLTTCNIIGIFVS*WMSSGY
Trigger: GTATCCAGATGACATCCATCAAGAAACGAAGATCCC...AATAATATTGCAAGTAGTAAGAAACGAAGGTGTCAAGTGTACTGCTGGGCAGCG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418709.6
ENST00000437221.5
CDS-3UTR TCA 90 bp TCTTTAATTTCCAGTCCAGGAGTGCTGATTTTAACACGTCTGCTTGGATCTCACGGGATCTTCGTTTCTTaGTGGATGTCATCTGGATAC +
Preference number: 4 (lower is better)
Translates to: SLISSPGVLILTRLLGSHGIFVS*WMSSGY
Trigger: GTATCCAGATGACATCCATCAAGAAACGAAGATCCC...GTGAGATCCAAGCAGACGTGTTAAAATCAGCACTCCTGGACTGGAAATTAAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418709.6
ENST00000437221.5
CDS-3UTR TCA 90 bp TTCTTCCCCTTAATGGGTTTGCAAAGCTGCATGCTTGTTGCAGAAGTTTACAGTGTTTCAATTGTGTGCTaGGGAAGGTACTGCATGAGT +
Preference number: 4 (lower is better)
Translates to: FFPLMGLQSCMLVAEVYSVSIVC*GRYCMS
Trigger: ACTCATGCAGTACCTTCCTCAGCACACAATTGAAAC...ACTGTAAACTTCTGCAACAAGCATGCAGCTTTGCAAACCCATTAAGGGGAAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264731.8
ENST00000354600.10
CDS-3UTR TCA 90 bp CGCTGCCCAGCAGTACACTTGACACCTTCGTTTCTTACTACTTGCAATATTATTGTTTCAATTGTGTGCTaGGGAAGGTACTGCATGAGT +
Preference number: 4 (lower is better)
Translates to: RCPAVHLTPSFLTTCNIIVSIVC*GRYCMS
Trigger: ACTCATGCAGTACCTTCCTCAGCACACAATTGAAAC...AATAATATTGCAAGTAGTAAGAAACGAAGGTGTCAAGTGTACTGCTGGGCAGCG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418709.6
ENST00000437221.5
CDS-3UTR TCA 90 bp AAGGTAAACAAGCCTCTACATGCAGAGTTTTATAGAATAGGAGGGTCTTTAAAAGAGAGTAGGCTGCCATaGGGAGGTAAGCCAGTAAGG +
Preference number: 4 (lower is better)
Translates to: KVNKPLHAEFYRIGGSLKESRLP*GGKPVR
Trigger: CCTTACTGGCTTACCTCCTCATGGCAGCCTACTCTC...TTTTAAAGACCCTCCTATTCTATAAAACTCTGCATGTAGAGGCTTGTTTACCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264731.8
ENST00000354600.10
CDS-3UTR TCA 90 bp CAAAAACTTTTCAATTCTTCAGCTAACTGCATTGAGCTGAGGCCACAAGAACTCCTAACTGCATTGAGCTaGGGCCACAAGAACTCCATT +
Preference number: 4 (lower is better)
Translates to: QKLFNSSANCIELRPQELLTALS*GHKNSI
Trigger: AATGGAGTTCTTGTGGCCTCAGCTCAATGCAGTTAG...GAGTTCTTGTGGCCTCAGCTCAATGCAGTTAGCTGAAGAATTGAAAAGTTTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264731.8
ENST00000354600.10
CDS-3UTR TCA 90 bp AAGTGTCTTCAAGTCCTGTTTATGAGGGCTAGATACACACGCACACACATACACTGTTCTACCTACACATaGGGGGAGGACACAAATAAT +
Preference number: 4 (lower is better)
Translates to: KCLQVLFMRARYTRTHIHCSTYT*GEDTNN
Trigger: ATTATTTGTGTCCTCCCCTCATGTGTAGGTAGAACA...GTGTATGTGTGTGCGTGTGTATCTAGCCCTCATAAACAGGACTTGAAGACACTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000418709.6
ENST00000437221.5
CDS-3UTR GCA 90 bp GCTTGGATCTCACTTACTCAAAACGTAAGTCTCCTGGCTAAATGCACTGAACAGCTGTCCGAAACTTGCTaGTTTCTGATGCTATCTTCA +
Preference number: 4 (lower is better)
Translates to: AWISLTQNVSLLAKCTEQLSETC*FLMLSS
Trigger: TGAAGATAGCATCAGAAAGCAGCAAGTTTCGGACAG...CTGTTCAGTGCATTTAGCCAGGAGACTTACGTTTTGAGTAAGTGAGATCCAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418709.6
ENST00000437221.5
CDS-3UTR GCA 90 bp CGCTGCCCAGCAGTACACTTGACACCTTCGTTTCTTACTACTTGCAATATTATTTGCTGCTGTTGCTGTTaGCTGTACGTTTCAATTGTG +
Preference number: 4 (lower is better)
Translates to: RCPAVHLTPSFLTTCNIICCCCC*LYVSIV
Trigger: CACAATTGAAACGTACAGGCAACAGCAACAGCAGCA...AATAATATTGCAAGTAGTAAGAAACGAAGGTGTCAAGTGTACTGCTGGGCAGCG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418709.6
ENST00000437221.5
CDS-3UTR GCA 90 bp ATGGTAAACAACTACGTAAGGGCAATATTACTGGGGTGGATTTGTCTTTCTATTAAGTGCTGGTGCTGCTaGTGTTGCTGTTGCCTGTAC +
Preference number: 4 (lower is better)
Translates to: MVNNYVRAILLGWICLSIKCWCC*CCCCLY
Trigger: GTACAGGCAACAGCAACAGCAGCAGCACCAGCACTT...AATAGAAAGACAAATCCACCCCAGTAATATTGCCCTTACGTAGTTGTTTACCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418709.6
ENST00000437221.5
CDS-3UTR GCA 90 bp ATGGTAAACAACTACGTAAGGGCAATATTACTGGGGTGGATTTGTCTTTCTATTAGTAAGTGCTGGTGCTaGTGCTGTTGCTGTTGCCTG +
Preference number: 4 (lower is better)
Translates to: MVNNYVRAILLGWICLSISKCWC*CCCCCL
Trigger: CAGGCAACAGCAACAGCAGCAGCACCAGCACTTACT...AATAGAAAGACAAATCCACCCCAGTAATATTGCCCTTACGTAGTTGTTTACCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418709.6
ENST00000437221.5
CDS-3UTR GCA 90 bp GTAAGAGGTAGCCTCTTACTTCTCCTTCCCCTAAGAAATCAGACAAGAGGAAGGAAGGCAGCTTGTTCATaGTGTTCATTTTGTTCAGAG +
Preference number: 4 (lower is better)
Translates to: VRGSLLLLLPLRNQTRGRKAACS*CSFCSE
Trigger: CTCTGAACAAAATGAACAGCATGAACAAGCTGCCTT...CCTTCCTCTTGTCTGATTTCTTAGGGGAAGGAGAAGTAAGAGGCTACCTCTTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264731.8
ENST00000320472.9
ENST00000354600.10
CDS-3UTR CCA 90 bp AGCTCTAGATACCTATCACCATACATGATACCCCTTAAGGGAAGGAGTATAGACGTGTGCTCTGGGACATaGTGGATCGGTAATAACTTT +
Preference number: 4 (lower is better)
Translates to: SSRYLSPYMIPLKGRSIDVCSGT*WIGNNF
Trigger: AAAGTTATTACCGATCCACCATGTCCCAGAGCACAC...GTCTATACTCCTTCCCTTAAGGGGTATCATGTATGGTGATAGGTATCTAGAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264731.8
CDS-3UTR CCA 90 bp TCTGCAGAAAACATCCTTTCTTGTAAAGGTTTGAGTCCCTTCAAAAGATTCTCTCTGTGTTATAGGGACTaGTGGACGAGGAGCCGTTCT +
Preference number: 4 (lower is better)
Translates to: SAENILSCKGLSPFKRFSLCYRD*WTRSRS
Trigger: AGAACGGCTCCTCGTCCACCAGTCCCTATAACACAG...AGAGAATCTTTTGAAGGGACTCAAACCTTTACAAGAAAGGATGTTTTCTGCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418709.6
ENST00000437221.5
CDS-3UTR CCA 90 bp AAGGTAAACAAGCCTCTACATGCAGAGTTTTATAGAATAGGAGGGTCTTTAAAAAGCTCCCTGAGGAGGTaGGGTCATCACCTTGATCTG +
Preference number: 4 (lower is better)
Translates to: KVNKPLHAEFYRIGGSLKSSLRR*GHHLDL
Trigger: CAGATCAAGGTGATGACCCCACCTCCTCAGGGAGCT...TTTTAAAGACCCTCCTATTCTATAAAACTCTGCATGTAGAGGCTTGTTTACCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264731.8
ENST00000354600.10
CDS-3UTR CCA 90 bp AAGGTAAACAAGCCTCTACATGCAGAGTTTTATAGAATAGGAGGGTCTTTAAAACCAGCCATTGGCATGTaGGTGCCCATCATGGGAATG +
Preference number: 4 (lower is better)
Translates to: KVNKPLHAEFYRIGGSLKPAIGM*VPIMGM
Trigger: CATTCCCATGATGGGCACCCACATGCCAATGGCTGG...TTTTAAAGACCCTCCTATTCTATAAAACTCTGCATGTAGAGGCTTGTTTACCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264731.8
ENST00000354600.10
CDS-3UTR CCA 90 bp AAGGTAAACAAGCCTCTACATGCAGAGTTTTATAGAATAGGAGGGTCTTTAAAACAATGCTGCAATCTGTaGGATACGGAGGTGGGGGTG +
Preference number: 4 (lower is better)
Translates to: KVNKPLHAEFYRIGGSLKQCCNL*DTEVGV
Trigger: CACCCCCACCTCCGTATCCCACAGATTGCAGCATTG...TTTTAAAGACCCTCCTATTCTATAAAACTCTGCATGTAGAGGCTTGTTTACCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000264731.8
ENST00000354600.10
CDS-3UTR CCA 90 bp TTCTTCCCCTTAATGGGTTTGCAAAGCTGCATGCTTGTTGCAGAAGTTTACAGTGACCTTTCATGTCTATaGGTAGTCCCTAAGGGAGAT +
Preference number: 4 (lower is better)
Translates to: FFPLMGLQSCMLVAEVYSDLSCL*VVPKGD
Trigger: ATCTCCCTTAGGGACTACCCATAGACATGAAAGGTC...ACTGTAAACTTCTGCAACAAGCATGCAGCTTTGCAAACCCATTAAGGGGAAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264731.8
ENST00000354600.10
CDS-3UTR CCA 90 bp GTAAGAGGTAGCCTCTTACTTCTCCTTCCCCTAAGAAATCAGACAAGAGGAAGGAACTCTTCGTTTAAGTaGTTTAAGCAACAGCAGCCA +
Preference number: 4 (lower is better)
Translates to: VRGSLLLLLPLRNQTRGRNSSFK*FKQQQP
Trigger: TGGCTGCTGTTGCTTAAACCACTTAAACGAAGAGTT...CCTTCCTCTTGTCTGATTTCTTAGGGGAAGGAGAAGTAAGAGGCTACCTCTTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264731.8
ENST00000354600.10
CDS-3UTR CCA 90 bp AGAGGTAGCCTCTTACTTCTCCTTCCCCTAAGAAATCAGACAAGAGGAAGGGGAAAAAGGTTTCAAGTGTaGTTCTGGAAATCCCACTAT +
Preference number: 4 (lower is better)
Translates to: RGSLLLLLPLRNQTRGRGKRFQV*FWKSHY
Trigger: ATAGTGGGATTTCCAGAACCACACTTGAAACCTTTT...TCCCCTTCCTCTTGTCTGATTTCTTAGGGGAAGGAGAAGTAAGAGGCTACCTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000264731.8
ENST00000354600.10
CDS-3UTR CCA 90 bp CACTTTCTAGTGGTTTCTATGCTTACTATCCTTTTACCCCTTACCCTGGCTACTTTTTACCCCTTACCCTaGCTACTCATACACTCAAGG +
Preference number: 4 (lower is better)
Translates to: HFLVVSMLTILLPLTLATFYPLP*LLIHSR
Trigger: CCTTGAGTGTATGAGTAGCCAGGGTAAGGGGTAAAA...AGTAGCCAGGGTAAGGGGTAAAAGGATAGTAAGCATAGAAACCACTAGAAAGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000264731.8
ENST00000354600.10
CDS-3UTR CCA 90 bp TTCTTCCCCTTAATGGGTTTGCAAAGCTGCATGCTTGTTGCAGAAGTTTACAGTTTTTACCCCTTACCCTaGCTACTCATACACTCAAGG +
Preference number: 4 (lower is better)
Translates to: FFPLMGLQSCMLVAEVYSFYPLP*LLIHSR
Trigger: CCTTGAGTGTATGAGTAGCCAGGGTAAGGGGTAAAA...ACTGTAAACTTCTGCAACAAGCATGCAGCTTTGCAAACCCATTAAGGGGAAGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000264731.8
ENST00000354600.10
CDS-3UTR CCA 90 bp ACAGTGGTTCCTCACCCACCAATGGCCGGTCTAAGGATACAAAATCTGCAGAAATTTAACACGTCTGCTTaGATCTCACTTACTCAAAAC +
Preference number: 4 (lower is better)
Translates to: TVVPHPPMAGLRIQNLQKFNTSA*ISLTQN
Trigger: GTTTTGAGTAAGTGAGATCCAAGCAGACGTGTTAAA...TTTCTGCAGATTTTGTATCCTTAGACCGGCCATTGGTGGGTGAGGAACCACTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418709.6
ENST00000437221.5
CDS-3UTR TCA 90 bp TTCTTCCCCTTAATGGGTTTGCAAAGCTGCATGCTTGTTGCAGAAGTTTACAGTTCCTTCAACTGTCTTTaGTATCAACGAACGGAGAAC +
Preference number: 4 (lower is better)
Translates to: FFPLMGLQSCMLVAEVYSSFNCL*YQRTEN
Trigger: GTTCTCCGTTCGTTGATATCAAAGACAGTTGAAGGA...ACTGTAAACTTCTGCAACAAGCATGCAGCTTTGCAAACCCATTAAGGGGAAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264731.8
CDS-3UTR TCA 90 bp AGCTCTAGATACCTATCACCATACATGATACCCCTTAAGGGAAGGAGTATAGACTTCAAGTCAATGGGCTaGACTGAACATATAGGCTGT +
Preference number: 4 (lower is better)
Translates to: SSRYLSPYMIPLKGRSIDFKSMG*TEHIGC
Trigger: ACAGCCTATATGTTCAGTTCAGCCCATTGACTTGAA...GTCTATACTCCTTCCCTTAAGGGGTATCATGTATGGTGATAGGTATCTAGAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264731.8
CDS-3UTR TCA 90 bp CAAAAACTTTTCAATTCTTCAGCTAACTGCATTGAGCTGAGGCCACAAGAACTCTGTCGCACCATCTTCTaGTGGTTCATCCACAAAGTT +
Preference number: 4 (lower is better)
Translates to: QKLFNSSANCIELRPQELCRTIF*WFIHKV
Trigger: AACTTTGTGGATGAACCATCAGAAGATGGTGCGACA...GAGTTCTTGTGGCCTCAGCTCAATGCAGTTAGCTGAAGAATTGAAAAGTTTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264731.8
CDS-3UTR TCA 90 bp CTGCCCAGCAGTACACTTGACACCTTCGTTTCTTACTACTTGCAATATTATTACTCTACTCGAATCAAATaGCTAGGAGGGGCAATCTGT +
Preference number: 4 (lower is better)
Translates to: LPSSTLDTFVSYYLQYYYSTRIK*LGGAIC
Trigger: ACAGATTGCCCCTCCTAGTCATTTGATTCGAGTAGA...GTAATAATATTGCAAGTAGTAAGAAACGAAGGTGTCAAGTGTACTGCTGGGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418709.6
ENST00000437221.5
CDS-3UTR TCA 90 bp AAGTGTCTTCAAGTCCTGTTTATGAGGGCTAGATACACACGCACACACATACACAACTGCTGTTACACATaGAATTGTACAAGACTGTCG +
Preference number: 4 (lower is better)
Translates to: KCLQVLFMRARYTRTHIHNCCYT*NCTRLS
Trigger: CGACAGTCTTGTACAATTTCATGTGTAACAGCAGTT...GTGTATGTGTGTGCGTGTGTATCTAGCCCTCATAAACAGGACTTGAAGACACTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418709.6
ENST00000437221.5
CDS-3UTR TCA 90 bp CAAAAACTTTTCAATTCTTCAGCTAACTGCATTGAGCTGAGGCCACAAGAACTCACCTATCACCATACATaGTACCCCTTAAGGGAAGGA +
Preference number: 4 (lower is better)
Translates to: QKLFNSSANCIELRPQELTYHHT*YPLREG
Trigger: TCCTTCCCTTAAGGGGTATCATGTATGGTGATAGGT...GAGTTCTTGTGGCCTCAGCTCAATGCAGTTAGCTGAAGAATTGAAAAGTTTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000264731.8
ENST00000354600.10
CDS-3UTR TCA 90 bp TTCTTCCCCTTAATGGGTTTGCAAAGCTGCATGCTTGTTGCAGAAGTTTACAGTGAGGACGTTTGGACATaGACTTCTTCTTATAACTGG +
Preference number: 4 (lower is better)
Translates to: FFPLMGLQSCMLVAEVYSEDVWT*TSSYNW
Trigger: CCAGTTATAAGAAGAAGTTCATGTCCAAACGTCCTC...ACTGTAAACTTCTGCAACAAGCATGCAGCTTTGCAAACCCATTAAGGGGAAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264731.8
ENST00000354600.10
CDS-3UTR TCA 90 bp GTAAGAGGTAGCCTCTTACTTCTCCTTCCCCTAAGAAATCAGACAAGAGGAAGGAAGAAAATGATACAGTaGTGCAATTTATGCCACAGG +
Preference number: 4 (lower is better)
Translates to: VRGSLLLLLPLRNQTRGRKKMIQ*CNLCHR
Trigger: CCTGTGGCATAAATTGCATCACTGTATCATTTTCTT...CCTTCCTCTTGTCTGATTTCTTAGGGGAAGGAGAAGTAAGAGGCTACCTCTTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264731.8
ENST00000354600.10
CDS-3UTR TCA 90 bp AGCTCTAGATACCTATCACCATACATGATACCCCTTAAGGGAAGGAGTATAGACCTAGTGCCAAATCCATaGGACACAGTACAGGAATTT +
Preference number: 4 (lower is better)
Translates to: SSRYLSPYMIPLKGRSIDLVPNP*DTVQEF
Trigger: AAATTCCTGTACTGTGTCTCATGGATTTGGCACTAG...GTCTATACTCCTTCCCTTAAGGGGTATCATGTATGGTGATAGGTATCTAGAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264731.8
ENST00000354600.10
CDS-3UTR TCA 90 bp TCTGCAGAAAACATCCTTTCTTGTAAAGGTTTGAGTCCCTTCAAAAGATTCTCTGAGCAGTTGGGTCTCTaGGCCAAAGTGTCTTCAAGT +
Preference number: 4 (lower is better)
Translates to: SAENILSCKGLSPFKRFSEQLGL*AKVSSS
Trigger: ACTTGAAGACACTTTGGCTCAGAGACCCAACTGCTC...AGAGAATCTTTTGAAGGGACTCAAACCTTTACAAGAAAGGATGTTTTCTGCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418709.6
ENST00000437221.5
CDS-3UTR TCA 90 bp ATGGTAAACAACTACGTAAGGGCAATATTACTGGGGTGGATTTGTCTTTCTATTGAGCAGTTGGGTCTCTaGGCCAAAGTGTCTTCAAGT +
Preference number: 4 (lower is better)
Translates to: MVNNYVRAILLGWICLSIEQLGL*AKVSSS
Trigger: ACTTGAAGACACTTTGGCTCAGAGACCCAACTGCTC...AATAGAAAGACAAATCCACCCCAGTAATATTGCCCTTACGTAGTTGTTTACCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418709.6
ENST00000437221.5
CDS-3UTR TCA 90 bp CCCTTTCAATCTTTAATTTCCAGTCCAGGAGTGCTGATTTTAACACGTCTGCTTTTAAAAGGGTCTGACTaGGTCTCTCAGTCACCTACA +
Preference number: 4 (lower is better)
Translates to: PFQSLISSPGVLILTRLLLKGSD*VSQSPT
Trigger: TGTAGGTGACTGAGAGACTCAGTCAGACCCTTTTAA...AAGCAGACGTGTTAAAATCAGCACTCCTGGACTGGAAATTAAAGATTGAAAGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000418709.6
ENST00000437221.5
CDS-3UTR TCA 90 bp TCTTTAATTTCCAGTCCAGGAGTGCTGATTTTAACACGTCTGCTTGGATCTCACATTAAAAGCACAAAATaGGTTCACCTGCTATGGGGG +
Preference number: 4 (lower is better)
Translates to: SLISSPGVLILTRLLGSHIKSTK*VHLLWG
Trigger: CCCCCATAGCAGGTGAACTCATTTTGTGCTTTTAAT...GTGAGATCCAAGCAGACGTGTTAAAATCAGCACTCCTGGACTGGAAATTAAAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000418709.6
ENST00000437221.5
CDS-3UTR GCA 90 bp TTCTTCCCCTTAATGGGTTTGCAAAGCTGCATGCTTGTTGCAGAAGTTTACAGTCTGTCCGAAACTTGCTaGTTTCTGATGCTATCTTCA +
Preference number: 4 (lower is better)
Translates to: FFPLMGLQSCMLVAEVYSLSETC*FLMLSS
Trigger: TGAAGATAGCATCAGAAAGCAGCAAGTTTCGGACAG...ACTGTAAACTTCTGCAACAAGCATGCAGCTTTGCAAACCCATTAAGGGGAAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264731.8
ENST00000354600.10
CDS-3UTR GCA 90 bp AGCTCTAGATACCTATCACCATACATGATACCCCTTAAGGGAAGGAGTATAGACGTACTGTCCGAAACTTaGTGCTTTCTGATGCTATCT +
Preference number: 4 (lower is better)
Translates to: SSRYLSPYMIPLKGRSIDVLSET*CFLMLS
Trigger: AGATAGCATCAGAAAGCAGCAAGTTTCGGACAGTAC...GTCTATACTCCTTCCCTTAAGGGGTATCATGTATGGTGATAGGTATCTAGAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264731.8
ENST00000354600.10
CDS-3UTR GCA 90 bp CGCTGCCCAGCAGTACACTTGACACCTTCGTTTCTTACTACTTGCAATATTATTGTACTGTCCGAAACTTaGTGCTTTCTGATGCTATCT +
Preference number: 4 (lower is better)
Translates to: RCPAVHLTPSFLTTCNIIVLSET*CFLMLS
Trigger: AGATAGCATCAGAAAGCAGCAAGTTTCGGACAGTAC...AATAATATTGCAAGTAGTAAGAAACGAAGGTGTCAAGTGTACTGCTGGGCAGCG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418709.6
ENST00000437221.5
CDS-3UTR GCA 90 bp CAAAAACTTTTCAATTCTTCAGCTAACTGCATTGAGCTGAGGCCACAAGAACTCTGCTGCTGTTGCTGTTaGCTGTACGTTTCAATTGTG +
Preference number: 4 (lower is better)
Translates to: QKLFNSSANCIELRPQELCCCCC*LYVSIV
Trigger: CACAATTGAAACGTACAGGCAACAGCAACAGCAGCA...GAGTTCTTGTGGCCTCAGCTCAATGCAGTTAGCTGAAGAATTGAAAAGTTTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264731.8
ENST00000354600.10
CDS-3UTR GCA 90 bp AAGGTAAACAAGCCTCTACATGCAGAGTTTTATAGAATAGGAGGGTCTTTAAAACCATTGGCATGTGGGTaGCCATCATGGGAATGTTGG +
Preference number: 4 (lower is better)
Translates to: KVNKPLHAEFYRIGGSLKPLACG*PSWECW
Trigger: CCAACATTCCCATGATGGGCACCCACATGCCAATGG...TTTTAAAGACCCTCCTATTCTATAAAACTCTGCATGTAGAGGCTTGTTTACCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264731.8
ENST00000354600.10
CDS-3UTR GCA 90 bp CACTTTCTAGTGGTTTCTATGCTTACTATCCTTTTACCCCTTACCCTGGCTACTAGGGATTTTCAGACTTaGCAGATCATCCATGGAGTA +
Preference number: 4 (lower is better)
Translates to: HFLVVSMLTILLPLTLATRDFQT*QIIHGV
Trigger: TACTCCATGGATGATCTGGCAAGTCTGAAAATCCCT...AGTAGCCAGGGTAAGGGGTAAAAGGATAGTAAGCATAGAAACCACTAGAAAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000264731.8
ENST00000354600.10
CDS-3UTR GCA 90 bp CACTTTCTAGTGGTTTCTATGCTTACTATCCTTTTACCCCTTACCCTGGCTACTTCAATGAGAAATCTCTaGAGCTTAAGGAGACACCCA +
Preference number: 4 (lower is better)
Translates to: HFLVVSMLTILLPLTLATSMRNL*SLRRHP
Trigger: TGGGTGTCTCCTTAAGCTGCAGAGATTTCTCATTGA...AGTAGCCAGGGTAAGGGGTAAAAGGATAGTAAGCATAGAAACCACTAGAAAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264731.8
ENST00000354600.10
CDS-3UTR GCA 90 bp TTCTTCCCCTTAATGGGTTTGCAAAGCTGCATGCTTGTTGCAGAAGTTTACAGTATGGGTTTGCAAAGCTaGATGCTTGTTGCAGAAGTT +
Preference number: 4 (lower is better)
Translates to: FFPLMGLQSCMLVAEVYSMGLQS*MLVAEV
Trigger: AACTTCTGCAACAAGCATGCAGCTTTGCAAACCCAT...ACTGTAAACTTCTGCAACAAGCATGCAGCTTTGCAAACCCATTAAGGGGAAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264731.8
ENST00000354600.10
CDS-3UTR GCA 90 bp TTCTTCCCCTTAATGGGTTTGCAAAGCTGCATGCTTGTTGCAGAAGTTTACAGTAATTCTTCAGCTAACTaGATTGAGCTGAGGCCACAA +
Preference number: 4 (lower is better)
Translates to: FFPLMGLQSCMLVAEVYSNSSAN*IELRPQ
Trigger: TTGTGGCCTCAGCTCAATGCAGTTAGCTGAAGAATT...ACTGTAAACTTCTGCAACAAGCATGCAGCTTTGCAAACCCATTAAGGGGAAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264731.8
ENST00000354600.10
CDS-3UTR CCA 90 bp TCTGCAGAAAACATCCTTTCTTGTAAAGGTTTGAGTCCCTTCAAAAGATTCTCTGTTTCTTCAGTTCAGTaGAATACGTCCAGGTGGCCG +
Preference number: 4 (lower is better)
Translates to: SAENILSCKGLSPFKRFSVSSVQ*NTSRWP
Trigger: CGGCCACCTGGACGTATTCCACTGAACTGAAGAAAC...AGAGAATCTTTTGAAGGGACTCAAACCTTTACAAGAAAGGATGTTTTCTGCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418709.6
ENST00000437221.5
CDS-3UTR CCA 90 bp ATGGTAAACAACTACGTAAGGGCAATATTACTGGGGTGGATTTGTCTTTCTATTTCTACATACTGGGCATaGCTGTTCCCCTCTACTCGA +
Preference number: 4 (lower is better)
Translates to: MVNNYVRAILLGWICLSISTYWA*LFPSTR
Trigger: TCGAGTAGAGGGGAACAGCCATGCCCAGTATGTAGA...AATAGAAAGACAAATCCACCCCAGTAATATTGCCCTTACGTAGTTGTTTACCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418709.6
ENST00000437221.5
CDS-3UTR CCA 90 bp CACTTTCTAGTGGTTTCTATGCTTACTATCCTTTTACCCCTTACCCTGGCTACTTTATCTCTTGCTCTGTaGGGACCTTTCATGTCTATG +
Preference number: 4 (lower is better)
Translates to: HFLVVSMLTILLPLTLATLSLAL*GPFMSM
Trigger: CATAGACATGAAAGGTCCCCACAGAGCAAGAGATAA...AGTAGCCAGGGTAAGGGGTAAAAGGATAGTAAGCATAGAAACCACTAGAAAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264731.8
ENST00000354600.10
CDS-3UTR CCA 90 bp TTCTTCCCCTTAATGGGTTTGCAAAGCTGCATGCTTGTTGCAGAAGTTTACAGTAAAGAGATTGTAGATTaGCTTCTGGCTCCCCAAAAG +
Preference number: 4 (lower is better)
Translates to: FFPLMGLQSCMLVAEVYSKEIVD*LLAPQK
Trigger: CTTTTGGGGAGCCAGAAGCCAATCTACAATCTCTTT...ACTGTAAACTTCTGCAACAAGCATGCAGCTTTGCAAACCCATTAAGGGGAAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000264731.8
ENST00000354600.10
CDS-3UTR CCA 90 bp ATGGTAAACAACTACGTAAGGGCAATATTACTGGGGTGGATTTGTCTTTCTATTGTGCCTTTGAGCAGTTaGGTCTCTGAGCCAAAGTGT +
Preference number: 4 (lower is better)
Translates to: MVNNYVRAILLGWICLSIVPLSS*VSEPKC
Trigger: ACACTTTGGCTCAGAGACCCAACTGCTCAAAGGCAC...AATAGAAAGACAAATCCACCCCAGTAATATTGCCCTTACGTAGTTGTTTACCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418709.6
ENST00000437221.5
CDS-3UTR CCA 90 bp TCTGCAGAAAACATCCTTTCTTGTAAAGGTTTGAGTCCCTTCAAAAGATTCTCTCACAGACAAACACAGTaGTTCCTCACCCACCAATGG +
Preference number: 4 (lower is better)
Translates to: SAENILSCKGLSPFKRFSHRQTQ*FLTHQW
Trigger: CCATTGGTGGGTGAGGAACCACTGTGTTTGTCTGTG...AGAGAATCTTTTGAAGGGACTCAAACCTTTACAAGAAAGGATGTTTTCTGCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418709.6
ENST00000437221.5
CDS-3UTR TCA 90 bp CCCTTTCAATCTTTAATTTCCAGTCCAGGAGTGCTGATTTTAACACGTCTGCTTTCTTTCCAAGAGAAATaGGCTGGGGTTTCTACGAAA +
Preference number: 4 (lower is better)
Translates to: PFQSLISSPGVLILTRLLSFQEK*AGVSTK
Trigger: TTTCGTAGAAACCCCAGCTCATTTCTCTTGGAAAGA...AAGCAGACGTGTTAAAATCAGCACTCCTGGACTGGAAATTAAAGATTGAAAGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000418709.6
CDS-3UTR TCA 90 bp ATGGTAAACAACTACGTAAGGGCAATATTACTGGGGTGGATTTGTCTTTCTATTGTCAATGGGCTGAACTaGACATATAGGCTGTTCCAG +
Preference number: 4 (lower is better)
Translates to: MVNNYVRAILLGWICLSIVNGLN*TYRLFQ
Trigger: CTGGAACAGCCTATATGTTCAGTTCAGCCCATTGAC...AATAGAAAGACAAATCCACCCCAGTAATATTGCCCTTACGTAGTTGTTTACCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418709.6
CDS-3UTR TCA 90 bp AAGGTAAACAAGCCTCTACATGCAGAGTTTTATAGAATAGGAGGGTCTTTAAAAATACCATGTGTGTTCTaGCGAAACGGGCGCTTCGTA +
Preference number: 4 (lower is better)
Translates to: KVNKPLHAEFYRIGGSLKIPCVF*RNGRFV
Trigger: TACGAAGCGCCCGTTTCGTCAGAACACACATGGTAT...TTTTAAAGACCCTCCTATTCTATAAAACTCTGCATGTAGAGGCTTGTTTACCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264731.8
ENST00000354600.10
CDS-3UTR TCA 90 bp TTCTTCCCCTTAATGGGTTTGCAAAGCTGCATGCTTGTTGCAGAAGTTTACAGTATATGCTCAAATACATaGCGTCGGGTGTTTTTGAAC +
Preference number: 4 (lower is better)
Translates to: FFPLMGLQSCMLVAEVYSICSNT*RRVFLN
Trigger: GTTCAAAAACACCCGACGTCATGTATTTGAGCATAT...ACTGTAAACTTCTGCAACAAGCATGCAGCTTTGCAAACCCATTAAGGGGAAGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264731.8
ENST00000354600.10
CDS-3UTR TCA 90 bp CACTTTCTAGTGGTTTCTATGCTTACTATCCTTTTACCCCTTACCCTGGCTACTATATGCTCAAATACATaGCGTCGGGTGTTTTTGAAC +
Preference number: 4 (lower is better)
Translates to: HFLVVSMLTILLPLTLATICSNT*RRVFLN
Trigger: GTTCAAAAACACCCGACGTCATGTATTTGAGCATAT...AGTAGCCAGGGTAAGGGGTAAAAGGATAGTAAGCATAGAAACCACTAGAAAGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000264731.8
ENST00000354600.10
CDS-3UTR TCA 90 bp TCTGCAGAAAACATCCTTTCTTGTAAAGGTTTGAGTCCCTTCAAAAGATTCTCTGAAAGGAGATGTTTCTaGAGTAAGTGCTGGTGCTGC +
Preference number: 4 (lower is better)
Translates to: SAENILSCKGLSPFKRFSERRCF*SKCWCC
Trigger: GCAGCACCAGCACTTACTTCAGAAACATCTCCTTTC...AGAGAATCTTTTGAAGGGACTCAAACCTTTACAAGAAAGGATGTTTTCTGCAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418709.6
ENST00000437221.5
CDS-3UTR TCA 90 bp TCTTTAATTTCCAGTCCAGGAGTGCTGATTTTAACACGTCTGCTTGGATCTCACAAATCATTGTCTTGGTaGCAGAAAATACAGTGCTGG +
Preference number: 4 (lower is better)
Translates to: SLISSPGVLILTRLLGSHKSLSW*QKIQCW
Trigger: CCAGCACTGTATTTTCTGTCACCAAGACAATGATTT...GTGAGATCCAAGCAGACGTGTTAAAATCAGCACTCCTGGACTGGAAATTAAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418709.6
ENST00000437221.5
CDS-3UTR GCA 90 bp CAAAAACTTTTCAATTCTTCAGCTAACTGCATTGAGCTGAGGCCACAAGAACTCAGGGATTTTCAGACTTaGCAGATCATCCATGGAGTA +
Preference number: 4 (lower is better)
Translates to: QKLFNSSANCIELRPQELRDFQT*QIIHGV
Trigger: TACTCCATGGATGATCTGGCAAGTCTGAAAATCCCT...GAGTTCTTGTGGCCTCAGCTCAATGCAGTTAGCTGAAGAATTGAAAAGTTTTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000264731.8
ENST00000354600.10
CDS-3UTR GCA 90 bp AGCTCTAGATACCTATCACCATACATGATACCCCTTAAGGGAAGGAGTATAGACAAGCTGCATGCTTGTTaGAGAAGTTTACAGTGCTTA +
Preference number: 4 (lower is better)
Translates to: SSRYLSPYMIPLKGRSIDKLHAC*RSLQCL
Trigger: TAAGCACTGTAAACTTCTGCAACAAGCATGCAGCTT...GTCTATACTCCTTCCCTTAAGGGGTATCATGTATGGTGATAGGTATCTAGAGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264731.8
ENST00000354600.10
CDS-3UTR GCA 90 bp AGCTCTAGATACCTATCACCATACATGATACCCCTTAAGGGAAGGAGTATAGACTGTAAGATTGATCAATaGTGCTGTCCTTTCTTCTGG +
Preference number: 4 (lower is better)
Translates to: SSRYLSPYMIPLKGRSIDCKIDQ*CCPFFW
Trigger: CCAGAAGAAAGGACAGCAGCATTGATCAATCTTACA...GTCTATACTCCTTCCCTTAAGGGGTATCATGTATGGTGATAGGTATCTAGAGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354600.10
CDS-3UTR CCA 90 bp AAGGTAAACAAGCCTCTACATGCAGAGTTTTATAGAATAGGAGGGTCTTTAAAAGGCAGTACTGTAGGGTaGCACACCGTGAAGTTTCAA +
Preference number: 4 (lower is better)
Translates to: KVNKPLHAEFYRIGGSLKGSTVG*HTVKFQ
Trigger: TTGAAACTTCACGGTGTGCCACCCTACAGTACTGCC...TTTTAAAGACCCTCCTATTCTATAAAACTCTGCATGTAGAGGCTTGTTTACCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264731.8
CDS-3UTR CCA 90 bp AAGGTAAACAAGCCTCTACATGCAGAGTTTTATAGAATAGGAGGGTCTTTAAAAGTTTCTTCAGTTCAGTaGAATACGTCCAGGTGGCCG +
Preference number: 4 (lower is better)
Translates to: KVNKPLHAEFYRIGGSLKVSSVQ*NTSRWP
Trigger: CGGCCACCTGGACGTATTCCACTGAACTGAAGAAAC...TTTTAAAGACCCTCCTATTCTATAAAACTCTGCATGTAGAGGCTTGTTTACCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264731.8
ENST00000354600.10
CDS-3UTR TCA 90 bp AAGGTAAACAAGCCTCTACATGCAGAGTTTTATAGAATAGGAGGGTCTTTAAAAGTCAATGGGCTGAACTaGACATATAGGCTGTTCCAG +
Preference number: 4 (lower is better)
Translates to: KVNKPLHAEFYRIGGSLKVNGLN*TYRLFQ
Trigger: CTGGAACAGCCTATATGTTCAGTTCAGCCCATTGAC...TTTTAAAGACCCTCCTATTCTATAAAACTCTGCATGTAGAGGCTTGTTTACCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264731.8
CDS-3UTR TCA 90 bp CAAAAACTTTTCAATTCTTCAGCTAACTGCATTGAGCTGAGGCCACAAGAACTCAACTGCTGTTACACATaGAATTGTACAAGACTGTCG +
Preference number: 4 (lower is better)
Translates to: QKLFNSSANCIELRPQELNCCYT*NCTRLS
Trigger: CGACAGTCTTGTACAATTTCATGTGTAACAGCAGTT...GAGTTCTTGTGGCCTCAGCTCAATGCAGTTAGCTGAAGAATTGAAAAGTTTTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264731.8
ENST00000354600.10
CDS-3UTR TCA 90 bp TCTGCAGAAAACATCCTTTCTTGTAAAGGTTTGAGTCCCTTCAAAAGATTCTCTGTTTCAATTGTGTGCTaGGGAAGGTACTGCATGAGT +
Preference number: 4 (lower is better)
Translates to: SAENILSCKGLSPFKRFSVSIVC*GRYCMS
Trigger: ACTCATGCAGTACCTTCCTCAGCACACAATTGAAAC...AGAGAATCTTTTGAAGGGACTCAAACCTTTACAAGAAAGGATGTTTTCTGCAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418709.6
ENST00000437221.5
CDS-3UTR TCA 90 bp AAGGTAAACAAGCCTCTACATGCAGAGTTTTATAGAATAGGAGGGTCTTTAAAACTAGGGAGAAGGCTTTaGAGATTAAGCAGGAGTGCT +
Preference number: 4 (lower is better)
Translates to: KVNKPLHAEFYRIGGSLKLGRRL*RLSRSA
Trigger: AGCACTCCTGCTTAATCTTCAAAGCCTTCTCCCTAG...TTTTAAAGACCCTCCTATTCTATAAAACTCTGCATGTAGAGGCTTGTTTACCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264731.8
ENST00000354600.10
CDS-3UTR TCA 90 bp TCTGCAGAAAACATCCTTTCTTGTAAAGGTTTGAGTCCCTTCAAAAGATTCTCTTTCAAGTCCTGTTTATaGGGGCTAGATACACACGCA +
Preference number: 4 (lower is better)
Translates to: SAENILSCKGLSPFKRFSFKSCL*GLDTHA
Trigger: TGCGTGTGTATCTAGCCCTCATAAACAGGACTTGAA...AGAGAATCTTTTGAAGGGACTCAAACCTTTACAAGAAAGGATGTTTTCTGCAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000418709.6
ENST00000437221.5
CDS-3UTR TCA 90 bp CTGCCCAGCAGTACACTTGACACCTTCGTTTCTTACTACTTGCAATATTATTACCTCCACCCACAAAGTTaGTTACTTTTGGTAATGATC +
Preference number: 4 (lower is better)
Translates to: LPSSTLDTFVSYYLQYYYLHPQS*LLLVMI
Trigger: GATCATTACCAAAAGTAATCAACTTTGTGGGTGGAG...GTAATAATATTGCAAGTAGTAAGAAACGAAGGTGTCAAGTGTACTGCTGGGCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418709.6
ENST00000437221.5
CDS-3UTR GCA 90 bp ATGGTAAACAACTACGTAAGGGCAATATTACTGGGGTGGATTTGTCTTTCTATTTGCTGCTGTTGCTGTTaGCTGTACGTTTCAATTGTG +
Preference number: 4 (lower is better)
Translates to: MVNNYVRAILLGWICLSICCCCC*LYVSIV
Trigger: CACAATTGAAACGTACAGGCAACAGCAACAGCAGCA...AATAGAAAGACAAATCCACCCCAGTAATATTGCCCTTACGTAGTTGTTTACCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418709.6
ENST00000437221.5
CDS-3UTR GCA 90 bp AGCTCTAGATACCTATCACCATACATGATACCCCTTAAGGGAAGGAGTATAGACTTAAACAATACTCAATaGCCCCCACCCAAAAATCTA +
Preference number: 4 (lower is better)
Translates to: SSRYLSPYMIPLKGRSIDLNNTQ*PPPKNL
Trigger: TAGATTTTTGGGTGGGGGGCATTGAGTATTGTTTAA...GTCTATACTCCTTCCCTTAAGGGGTATCATGTATGGTGATAGGTATCTAGAGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000264731.8
ENST00000354600.10
CDS-3UTR CCA 90 bp TCTGCAGAAAACATCCTTTCTTGTAAAGGTTTGAGTCCCTTCAAAAGATTCTCTGTGTGCTCTGGGACATaGTGGATCGGTAATAACTTT +
Preference number: 4 (lower is better)
Translates to: SAENILSCKGLSPFKRFSVCSGT*WIGNNF
Trigger: AAAGTTATTACCGATCCACCATGTCCCAGAGCACAC...AGAGAATCTTTTGAAGGGACTCAAACCTTTACAAGAAAGGATGTTTTCTGCAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000418709.6
CDS-3UTR CCA 90 bp CAAAAACTTTTCAATTCTTCAGCTAACTGCATTGAGCTGAGGCCACAAGAACTCTTGCCAGATCATCCATaGAGTAATGCTCAATCTGAT +
Preference number: 4 (lower is better)
Translates to: QKLFNSSANCIELRPQELLPDHP*SNAQSD
Trigger: ATCAGATTGAGCATTACTCCATGGATGATCTGGCAA...GAGTTCTTGTGGCCTCAGCTCAATGCAGTTAGCTGAAGAATTGAAAAGTTTTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264731.8
ENST00000354600.10
CDS-3UTR CCA 90 bp CAAAAACTTTTCAATTCTTCAGCTAACTGCATTGAGCTGAGGCCACAAGAACTCAACTCTTCGTTTAAGTaGTTTAAGCAACAGCAGCCA +
Preference number: 4 (lower is better)
Translates to: QKLFNSSANCIELRPQELNSSFK*FKQQQP
Trigger: TGGCTGCTGTTGCTTAAACCACTTAAACGAAGAGTT...GAGTTCTTGTGGCCTCAGCTCAATGCAGTTAGCTGAAGAATTGAAAAGTTTTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264731.8
ENST00000354600.10
CDS-3UTR TCA 90 bp AAGGTAAACAAGCCTCTACATGCAGAGTTTTATAGAATAGGAGGGTCTTTAAAATCTACTCGAATCAAATaGCTAGGAGGGGCAATCTGT +
Preference number: 4 (lower is better)
Translates to: KVNKPLHAEFYRIGGSLKSTRIK*LGGAIC
Trigger: ACAGATTGCCCCTCCTAGTCATTTGATTCGAGTAGA...TTTTAAAGACCCTCCTATTCTATAAAACTCTGCATGTAGAGGCTTGTTTACCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000264731.8
ENST00000354600.10
CDS-3UTR TCA 90 bp TCTGCAGAAAACATCCTTTCTTGTAAAGGTTTGAGTCCCTTCAAAAGATTCTCTATTAAAAGCACAAAATaGGTTCACCTGCTATGGGGG +
Preference number: 4 (lower is better)
Translates to: SAENILSCKGLSPFKRFSIKSTK*VHLLWG
Trigger: CCCCCATAGCAGGTGAACTCATTTTGTGCTTTTAAT...AGAGAATCTTTTGAAGGGACTCAAACCTTTACAAGAAAGGATGTTTTCTGCAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000418709.6
ENST00000437221.5
CDS-3UTR GCA 90 bp AAGGTAAACAAGCCTCTACATGCAGAGTTTTATAGAATAGGAGGGTCTTTAAAATGCTGCTGTTGCTGTTaGCTGTACGTTTCAATTGTG +
Preference number: 4 (lower is better)
Translates to: KVNKPLHAEFYRIGGSLKCCCCC*LYVSIV
Trigger: CACAATTGAAACGTACAGGCAACAGCAACAGCAGCA...TTTTAAAGACCCTCCTATTCTATAAAACTCTGCATGTAGAGGCTTGTTTACCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264731.8
ENST00000354600.10
CDS-3UTR CCA 90 bp TCTGCAGAAAACATCCTTTCTTGTAAAGGTTTGAGTCCCTTCAAAAGATTCTCTTGCTCTGGGACATGGTaGATCGGTAATAACTTTCTT +
Preference number: 4 (lower is better)
Translates to: SAENILSCKGLSPFKRFSCSGTW*IGNNFL
Trigger: AAGAAAGTTATTACCGATCCACCATGTCCCAGAGCA...AGAGAATCTTTTGAAGGGACTCAAACCTTTACAAGAAAGGATGTTTTCTGCAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000418709.6
CDS-3UTR CCA 90 bp CACTTTCTAGTGGTTTCTATGCTTACTATCCTTTTACCCCTTACCCTGGCTACTACTTCTTCTTATAACTaGATTAAATCACCCCAACGT +
Preference number: 4 (lower is better)
Translates to: HFLVVSMLTILLPLTLATTSSYN*IKSPQR
Trigger: ACGTTGGGGTGATTTAATCCAGTTATAAGAAGAAGT...AGTAGCCAGGGTAAGGGGTAAAAGGATAGTAAGCATAGAAACCACTAGAAAGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000264731.8
ENST00000354600.10
CDS-3UTR GCA 90 bp AAGGTAAACAAGCCTCTACATGCAGAGTTTTATAGAATAGGAGGGTCTTTAAAAAGAAAATCCCAGATATaGTGGAAAACCTCTGGACTG +
Preference number: 4 (lower is better)
Translates to: KVNKPLHAEFYRIGGSLKRKSQI*WKTSGL
Trigger: CAGTCCAGAGGTTTTCCAGCATATCTGGGATTTTCT...TTTTAAAGACCCTCCTATTCTATAAAACTCTGCATGTAGAGGCTTGTTTACCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000264731.8
CDS-3UTR CCA 90 bp CAAAAACTTTTCAATTCTTCAGCTAACTGCATTGAGCTGAGGCCACAAGAACTCACTTCTTCTTATAACTaGATTAAATCACCCCAACGT +
Preference number: 4 (lower is better)
Translates to: QKLFNSSANCIELRPQELTSSYN*IKSPQR
Trigger: ACGTTGGGGTGATTTAATCCAGTTATAAGAAGAAGT...GAGTTCTTGTGGCCTCAGCTCAATGCAGTTAGCTGAAGAATTGAAAAGTTTTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000264731.8
ENST00000354600.10
CDS-3UTR CCA 90 bp AAGGTAAACAAGCCTCTACATGCAGAGTTTTATAGAATAGGAGGGTCTTTAAAATTATCTCTTGCTCTGTaGGGACCTTTCATGTCTATG +
Preference number: 4 (lower is better)
Translates to: KVNKPLHAEFYRIGGSLKLSLAL*GPFMSM
Trigger: CATAGACATGAAAGGTCCCCACAGAGCAAGAGATAA...TTTTAAAGACCCTCCTATTCTATAAAACTCTGCATGTAGAGGCTTGTTTACCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264731.8
ENST00000354600.10
CDS-3UTR CCA 90 bp AAGGTAAACAAGCCTCTACATGCAGAGTTTTATAGAATAGGAGGGTCTTTAAAACTTTTAGAGCCACGCTaGCCCTTTTGCACTTTAAAA +
Preference number: 4 (lower is better)
Translates to: KVNKPLHAEFYRIGGSLKLLEPR*PFCTLK
Trigger: TTTTAAAGTGCAAAAGGGCCAGCGTGGCTCTAAAAG...TTTTAAAGACCCTCCTATTCTATAAAACTCTGCATGTAGAGGCTTGTTTACCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000264731.8
ENST00000354600.10
CDS-3UTR GCA 90 bp AAGGTAAACAAGCCTCTACATGCAGAGTTTTATAGAATAGGAGGGTCTTTAAAAAAGGCAGCTTGTTCATaGTGTTCATTTTGTTCAGAG +
Preference number: 4 (lower is better)
Translates to: KVNKPLHAEFYRIGGSLKKAACS*CSFCSE
Trigger: CTCTGAACAAAATGAACAGCATGAACAAGCTGCCTT...TTTTAAAGACCCTCCTATTCTATAAAACTCTGCATGTAGAGGCTTGTTTACCTT
37% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000264731.8
ENST00000354600.10
CDS-3UTR CCA 90 bp ATGGTAAACAACTACGTAAGGGCAATATTACTGGGGTGGATTTGTCTTTCTATTTTTAACACGTCTGCTTaGATCTCACTTACTCAAAAC +
Preference number: 4 (lower is better)
Translates to: MVNNYVRAILLGWICLSIFNTSA*ISLTQN
Trigger: GTTTTGAGTAAGTGAGATCCAAGCAGACGTGTTAAA...AATAGAAAGACAAATCCACCCCAGTAATATTGCCCTTACGTAGTTGTTTACCAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000418709.6
ENST00000437221.5
CDS-3UTR CAA 90 bp ACACGCTCACCCCGGGTCTCACTGGAGCCCACACTGACTGTAGAGGCACTGCTTGCGTCGGCCCAGGACTaGCCCATCTCTGGTTTCCAG +
Preference number: 5 (lower is better)
Translates to: TRSPRVSLEPTLTVEALLASAQD*PISGFQ
Trigger: CTGGAAACCAGAGATGGGCAAGTCCTGGGCCGACGC...AAGCAGTGCCTCTACAGTCAGTGTGGGCTCCAGTGAGACCCGGGGTGAGCGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320472.9
CDS TCA 90 bp AGGTGGATGGCATGGAGAGTGGGGGAGGGAGTGCCTGGGTGGGGCTaGGTCCATTCATGTCTCCAGCCATTGGCATGTGGGTGCCCATCA +
Preference number: 5 (lower is better)
Translates to: RWMAWRVGEGVPGWG*VHSCLQPLACGCPS
Trigger: TGATGGGCACCCACATGCCAATGGCTGGAGACATGAATGGACTCAGCCCCACCCAGGCACTCCCTCCCCCACTCTCCATGCCATCCACCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000264731.8
ENST00000354600.10
ENST00000392460.7
ENST00000392463.6
ENST00000440651.6
ENST00000449992.5
ENST00000456148.1
CDS-3UTR CAA 90 bp CTCCCCCTCCTCTTTGATGCGCTGTTGCTTATTGCGGCGAGCATCCATGTCAAACGGCTCAGCTCATGGTaGGGGCACCGCTTCACCACC +
Preference number: 5 (lower is better)
Translates to: LPLLFDALLLIAASIHVKRLSSW*GHRFTT
Trigger: GGTGGTGAAGCGGTGCCCCAACCATGAGCTGAGCCG...TTTGACATGGATGCTCGCCGCAATAAGCAACAGCGCATCAAAGAGGAGGGGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000320472.9
CDS GCA 90 bp TATAGGGACTGGTGGACGAGGAGCCGTTCTGAATCTGCTGGTCCATaGTGTTCAGGAGCCCCAGGTTCGTGTACTGTGGCCACATGGGGT +
Preference number: 5 (lower is better)
Translates to: YRDWWTRSRSESAGP*CSGAPGSCTVATWG
Trigger: ACCCCATGTGGCCACAGTACACGAACCTGGGGCTCCTGAACAGCATGGACCAGCAGATTCAGAACGGCTCCTCGTCCACCAGTCCCTATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000264731.8
ENST00000320472.9
ENST00000392460.7
ENST00000418709.6
ENST00000440651.6
CDS CCA 90 bp CTAGGAGGGGCAATCTGTCCCTCGTTGAATTCACGGCTCAGCTCATaGTTGGGGCACCGCTTCACCACCTCCGTGACGTGCTCAGCTTTT +
Preference number: 5 (lower is better)
Translates to: LGGAICPSLNSRLSS*LGHRFTTSVTCSAF
Trigger: AAAAGCTGAGCACGTCACGGAGGTGGTGAAGCGGTGCCCCAACCATGAGCTGAGCCGTGAATTCAACGAGGGACAGATTGCCCCTCCTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000264731.8
ENST00000320472.9
ENST00000354600.10
ENST00000392460.7
ENST00000392461.7
ENST00000392463.6
ENST00000418709.6
ENST00000437221.5
ENST00000440651.6
ENST00000449992.5
ENST00000456148.1
ENST00000460036.1
CDS-3UTR CAA 90 bp GGGCTGGCAGTTAGGAGAGGGATAGGAAGAGCTCACATGGTGAGGCTCACTCCCCTGGTGCTGCTGCTGTaGCTGTTGCCTGTACGTTTC +
Preference number: 5 (lower is better)
Translates to: GLAVRRGIGRAHMVRLTPLVLLL*LLPVRF
Trigger: GAAACGTACAGGCAACAGCAACAGCAGCAGCACCAG...GGGAGTGAGCCTCACCATGTGAGCTCTTCCTATCCCTCTCCTAACTGCCAGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320472.9
CDS-3UTR CAA 90 bp GGGCTGGCAGTTAGGAGAGGGATAGGAAGAGCTCACATGGTGAGGCTCACTCCCCACTCCCCCTCCTCTTaGATGCGCTGTTGCTTATTG +
Preference number: 5 (lower is better)
Translates to: GLAVRRGIGRAHMVRLTPHSPSS*MRCCLL
Trigger: CAATAAGCAACAGCGCATCAAAGAGGAGGGGGAGTG...GGGAGTGAGCCTCACCATGTGAGCTCTTCCTATCCCTCTCCTAACTGCCAGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000320472.9
CDS-3UTR CAA 90 bp AACACGCTCACCCCGGGTCTCACTGGAGCCCACACTGACTGTAGAGGCACTGCTGCCTGTACGTTTCAATaGTGTGCTGAGGAAGGTACT +
Preference number: 5 (lower is better)
Translates to: NTLTPGLTGAHTDCRGTAACTFQ*CAEEGT
Trigger: AGTACCTTCCTCAGCACACAATTGAAACGTACAGGC...AGCAGTGCCTCTACAGTCAGTGTGGGCTCCAGTGAGACCCGGGGTGAGCGTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320472.9
CDS GCA 90 bp GATGAGAAGGGGAGGAGAATTCGTGGAGCTGCCGGTGGTCCAGGATaGCCTTCCAGATCGCATGTCGAAATTGCTCAGGGATTTTCAGAC +
Preference number: 5 (lower is better)
Translates to: DEKGRRIRGAAGGPG*PSRSHVEIAQGFSD
Trigger: GTCTGAAAATCCCTGAGCAATTTCGACATGCGATCTGGAAGGGCATCCTGGACCACCGGCAGCTCCACGAATTCTCCTCCCCTTCTCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000264731.8
ENST00000320472.9
ENST00000354600.10
ENST00000440651.6
ENST00000449992.5
ENST00000456148.1
CDS-3UTR CAA 90 bp TTTAGGGGGCTGGCAGTTAGGAGAGGGATAGGAAGAGCTCACATGGTGAGGCTCGCAATCTGTCCCTCGTaGAATTCACGGCTCAGCTCA +
Preference number: 5 (lower is better)
Translates to: FRGLAVRRGIGRAHMVRLAICPS*NSRLSS
Trigger: TGAGCTGAGCCGTGAATTCAACGAGGGACAGATTGC...GAGCCTCACCATGTGAGCTCTTCCTATCCCTCTCCTAACTGCCAGCCCCCTAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000320472.9
CDS-3UTR CAA 90 bp TCCCTAAGGGAGATGGACGGGAAACTGGGTTCTCACAGTTACTTTCCAACAAACGCGTCGGCCCAGGACTaGCCCATCTCTGGTTTCCAG +
Preference number: 5 (lower is better)
Translates to: SLREMDGKLGSHSYFPTNASAQD*PISGFQ
Trigger: CTGGAAACCAGAGATGGGCAAGTCCTGGGCCGACGC...GTTTGTTGGAAAGTAACTGTGAGAACCCAGTTTCCCGTCCATCTCCCTTAGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264731.8
ENST00000354600.10
CDS-3UTR CAA 90 bp ACAGTGGTTCCTCACCCACCAATGGCCGGTCTAAGGATACAAAATCTGCAGAAAGCGTCGGCCCAGGACTaGCCCATCTCTGGTTTCCAG +
Preference number: 5 (lower is better)
Translates to: TVVPHPPMAGLRIQNLQKASAQD*PISGFQ
Trigger: CTGGAAACCAGAGATGGGCAAGTCCTGGGCCGACGC...TTTCTGCAGATTTTGTATCCTTAGACCGGCCATTGGTGGGTGAGGAACCACTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418709.6
ENST00000437221.5
CDS-3UTR CAA 90 bp ACACGCTCACCCCGGGTCTCACTGGAGCCCACACTGACTGTAGAGGCACTGCTTGGGGATCTTCGTTTCTaGATGGATGTCATCTGGATA +
Preference number: 5 (lower is better)
Translates to: TRSPRVSLEPTLTVEALLGDLRF*MDVIWI
Trigger: TATCCAGATGACATCCATCAAGAAACGAAGATCCCC...AAGCAGTGCCTCTACAGTCAGTGTGGGCTCCAGTGAGACCCGGGGTGAGCGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320472.9
CDS-3UTR CAA 90 bp GATGAGAAGGGGAGGAGAATTCGTGGAGCTGCCGGTGGTCCAGGATGCCCTTCCGATCGCATGTCGAAATaGCTCAGGGATTTTCAGACT +
Preference number: 5 (lower is better)
Translates to: DEKGRRIRGAAGGPGCPSDRMSK*LRDFQT
Trigger: AGTCTGAAAATCCCTGAGCAATTTCGACATGCGATC...GGAAGGGCATCCTGGACCACCGGCAGCTCCACGAATTCTCCTCCCCTTCTCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320472.9
CDS GCA 90 bp AAGCCTGTGCCACTCACCCACATGGGGTCACTCAGGTCCGAGTCCTaGATGCGGATACAGTCCATGCTAATCTCAATCTTGTTTGTCGCA +
Preference number: 5 (lower is better)
Translates to: KPVPLTHMGSLRSES*MRIQSMLISILFVA
Trigger: TGCGACAAACAAGATTGAGATTAGCATGGACTGTATCCGCATGCAGGACTCGGACCTGAGTGACCCCATGTGGGTGAGTGGCACAGGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486398.1
CDS-3UTR CAA 90 bp GAAAGAGATGGTCTGGCGGAGGGTGAATCGCACAGCATCAATAACACGCTCACCCTCTTTGATGCGCTGTaGCTTATTGCGGCGAGCATC +
Preference number: 5 (lower is better)
Translates to: ERDGLAEGESHSINNTLTLFDAL*LIAASI
Trigger: GATGCTCGCCGCAATAAGCAACAGCGCATCAAAGAG...GGTGAGCGTGTTATTGATGCTGTGCGATTCACCCTCCGCCAGACCATCTCTTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320472.9
CDS GCA 90 bp AGGTTCGTGTACTGTGGCCACATGGGGTCACTCAGGTCCGAGTCCTaGATGCGGATACAGTCCATGCTAATCTCAATCTTGTTTGTCGCA +
Preference number: 5 (lower is better)
Translates to: RFVYCGHMGSLRSES*MRIQSMLISILFVA
Trigger: TGCGACAAACAAGATTGAGATTAGCATGGACTGTATCCGCATGCAGGACTCGGACCTGAGTGACCCCATGTGGCCACAGTACACGAACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264731.8
ENST00000320472.9
ENST00000392460.7
ENST00000418709.6
ENST00000440651.6
CDS GCA 90 bp GGGCGCTTCGTACCATCACCGTTCTTTGTACTGTCCGAAACTTGCTaGTTTCTGATGCTATCTTCATCCGCCTTCCTGTCTCTTCCTGGG +
Preference number: 5 (lower is better)
Translates to: GRFVPSPFFVLSETC*FLMLSSSAFLSLPG
Trigger: CCCAGGAAGAGACAGGAAGGCGGATGAAGATAGCATCAGAAAGCAGCAAGTTTCGGACAGTACAAAGAACGGTGATGGTACGAAGCGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000264731.8
ENST00000320472.9
ENST00000354600.10
ENST00000392460.7
ENST00000392461.7
ENST00000392463.6
ENST00000418709.6
ENST00000437221.5
ENST00000449992.5
ENST00000460036.1
CDS-3UTR CAA 90 bp TTCTTCCCCTTAATGGGTTTGCAAAGCTGCATGCTTGTTGCAGAAGTTTACAGTCGGCTCAGCTCATGGTaGGGGCACCGCTTCACCACC +
Preference number: 5 (lower is better)
Translates to: FFPLMGLQSCMLVAEVYSRLSSW*GHRFTT
Trigger: GGTGGTGAAGCGGTGCCCCAACCATGAGCTGAGCCG...ACTGTAAACTTCTGCAACAAGCATGCAGCTTTGCAAACCCATTAAGGGGAAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264731.8
ENST00000354600.10
CDS-3UTR CAA 90 bp GCTTGGATCTCACTTACTCAAAACGTAAGTCTCCTGGCTAAATGCACTGAACAGGCGTCGGCCCAGGACTaGCCCATCTCTGGTTTCCAG +
Preference number: 5 (lower is better)
Translates to: AWISLTQNVSLLAKCTEQASAQD*PISGFQ
Trigger: CTGGAAACCAGAGATGGGCAAGTCCTGGGCCGACGC...CTGTTCAGTGCATTTAGCCAGGAGACTTACGTTTTGAGTAAGTGAGATCCAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418709.6
ENST00000437221.5
CDS TCA 90 bp TCTTCTACATACTGGGCATGGCTGTTCCCCTCTACTCGAATCAAATaGCTAGGAGGGGCAATCTGTCCCTCGTTGAATTCACGGCTCAGC +
Preference number: 5 (lower is better)
Translates to: SSTYWAWLFPSTRIK*LGGAICPSLNSRLS
Trigger: GCTGAGCCGTGAATTCAACGAGGGACAGATTGCCCCTCCTAGTCATTTGATTCGAGTAGAGGGGAACAGCCATGCCCAGTATGTAGAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000264731.8
ENST00000320472.9
ENST00000354600.10
ENST00000392460.7
ENST00000392461.7
ENST00000392463.6
ENST00000418709.6
ENST00000437221.5
ENST00000440651.6
ENST00000449992.5
ENST00000456148.1
ENST00000460036.1
CDS-3UTR CAA 90 bp GGGCTGGCAGTTAGGAGAGGGATAGGAAGAGCTCACATGGTGAGGCTCACTCCCATGCTAATCTCAATCTaGTTTGTCGCACCATCTTCT +
Preference number: 5 (lower is better)
Translates to: GLAVRRGIGRAHMVRLTPMLISI*FVAPSS
Trigger: AGAAGATGGTGCGACAAACAAGATTGAGATTAGCAT...GGGAGTGAGCCTCACCATGTGAGCTCTTCCTATCCCTCTCCTAACTGCCAGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320472.9
CDS-3UTR CAA 90 bp CACTTTCTAGTGGTTTCTATGCTTACTATCCTTTTACCCCTTACCCTGGCTACTGCGTCGGCCCAGGACTaGCCCATCTCTGGTTTCCAG +
Preference number: 5 (lower is better)
Translates to: HFLVVSMLTILLPLTLATASAQD*PISGFQ
Trigger: CTGGAAACCAGAGATGGGCAAGTCCTGGGCCGACGC...AGTAGCCAGGGTAAGGGGTAAAAGGATAGTAAGCATAGAAACCACTAGAAAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264731.8
ENST00000354600.10
CDS-3UTR CAA 90 bp AATAACACGCTCACCCCGGGTCTCACTGGAGCCCACACTGACTGTAGAGGCACTGCATCCATGTCAAAGTaGAAGTCATTCCACTCATCT +
Preference number: 5 (lower is better)
Translates to: NNTLTPGLTGAHTDCRGTASMSK*KSFHSS
Trigger: AGATGAGTGGAATGACTTCAACTTTGACATGGATGC...AGTGCCTCTACAGTCAGTGTGGGCTCCAGTGAGACCCGGGGTGAGCGTGTTATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320472.9
CDS-3UTR CAA 90 bp TGCTTATTGCGGCGAGCATCCATGTCAAAGTTGAAGTCATTCCACTCATCTCGGGACTTGCCAGATCTGTaGGCTCCCATGCCATCAGGA +
Preference number: 5 (lower is better)
Translates to: CLLRRASMSKLKSFHSSRDLPDL*APMPSG
Trigger: TCCTGATGGCATGGGAGCCAACAGATCTGGCAAGTC...CCGAGATGAGTGGAATGACTTCAACTTTGACATGGATGCTCGCCGCAATAAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320472.9
CDS TCA 90 bp TCGTACCATCACCGTTCTTTGTACTGTCCGAAACTTGCTGCTTTCTaGTGCTATCTTCATCCGCCTTCCTGTCTCTTCCTGGGCAAGCAC +
Preference number: 5 (lower is better)
Translates to: SYHHRSLYCPKLAAF*CYLHPPSCLFLGKH
Trigger: GTGCTTGCCCAGGAAGAGACAGGAAGGCGGATGAAGATAGCATCAGAAAGCAGCAAGTTTCGGACAGTACAAAGAACGGTGATGGTACGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000264731.8
ENST00000320472.9
ENST00000354600.10
ENST00000392460.7
ENST00000392461.7
ENST00000392463.6
ENST00000418709.6
ENST00000437221.5
ENST00000449992.5
ENST00000460036.1
CDS TCA 90 bp GAAACGCATCACCGTTCTTTGTACTGTCCGAAACTTGCTGCTTTCTaGTGCTATCTTCATCCGCCTTCCTGTCTCTTCCTGGGCAAGCAC +
Preference number: 5 (lower is better)
Translates to: ETHHRSLYCPKLAAF*CYLHPPSCLFLGKH
Trigger: GTGCTTGCCCAGGAAGAGACAGGAAGGCGGATGAAGATAGCATCAGAAAGCAGCAAGTTTCGGACAGTACAAAGAACGGTGATGCGTTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440651.6
ENST00000456148.1
CDS GCA 90 bp AACGGGCGCTTCGTACCATCACCGTTCTTTGTACTGTCCGAAACTTaGTGCTTTCTGATGCTATCTTCATCCGCCTTCCTGTCTCTTCCT +
Preference number: 5 (lower is better)
Translates to: NGRFVPSPFFVLSET*CFLMLSSSAFLSLP
Trigger: AGGAAGAGACAGGAAGGCGGATGAAGATAGCATCAGAAAGCAGCAAGTTTCGGACAGTACAAAGAACGGTGATGGTACGAAGCGCCCGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000264731.8
ENST00000320472.9
ENST00000354600.10
ENST00000392460.7
ENST00000392461.7
ENST00000392463.6
ENST00000418709.6
ENST00000437221.5
ENST00000449992.5
ENST00000460036.1
CDS-3UTR CAA 90 bp CTCCCCCTCCTCTTTGATGCGCTGTTGCTTATTGCGGCGAGCATCCATGTCAAATACCATCACCGTTCTTaGTACTGTCCGAAACTTGCT +
Preference number: 5 (lower is better)
Translates to: LPLLFDALLLIAASIHVKYHHRS*YCPKLA
Trigger: AGCAAGTTTCGGACAGTACAAAGAACGGTGATGGTA...TTTGACATGGATGCTCGCCGCAATAAGCAACAGCGCATCAAAGAGGAGGGGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000320472.9
CDS-3UTR CAA 90 bp GTAAGAGGTAGCCTCTTACTTCTCCTTCCCCTAAGAAATCAGACAAGAGGAAGGCTGGTGCTGCTGCTGTaGCTGTTGCCTGTACGTTTC +
Preference number: 5 (lower is better)
Translates to: VRGSLLLLLPLRNQTRGRLVLLL*LLPVRF
Trigger: GAAACGTACAGGCAACAGCAACAGCAGCAGCACCAG...CCTTCCTCTTGTCTGATTTCTTAGGGGAAGGAGAAGTAAGAGGCTACCTCTTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264731.8
ENST00000320472.9
ENST00000354600.10
CDS-3UTR CAA 90 bp GTAAGAGGTAGCCTCTTACTTCTCCTTCCCCTAAGAAATCAGACAAGAGGAAGGCCCATCATGGGAATGTaGGCTCCCATGCCATCAGGA +
Preference number: 5 (lower is better)
Translates to: VRGSLLLLLPLRNQTRGRPIMGM*APMPSG
Trigger: TCCTGATGGCATGGGAGCCAACATTCCCATGATGGG...CCTTCCTCTTGTCTGATTTCTTAGGGGAAGGAGAAGTAAGAGGCTACCTCTTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264731.8
ENST00000354600.10
CDS-3UTR CAA 90 bp CTCTTTGATGCGCTGTTGCTTATTGCGGCGAGCATCCATGTCAAAGTTGAAGTCATGCGCTGTTGCTTATaGCGGCGAGCATCCATGTCA +
Preference number: 5 (lower is better)
Translates to: LFDALLLIAASIHVKVEVMRCCL*RRASMS
Trigger: TGACATGGATGCTCGCCGCAATAAGCAACAGCGCAT...GACTTCAACTTTGACATGGATGCTCGCCGCAATAAGCAACAGCGCATCAAAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320472.9
CDS-3UTR CAA 90 bp TCCCTAAGGGAGATGGACGGGAAACTGGGTTCTCACAGTTACTTTCCAACAAACCACTCCCCCTCCTCTTaGATGCGCTGTTGCTTATTG +
Preference number: 5 (lower is better)
Translates to: SLREMDGKLGSHSYFPTNHSPSS*MRCCLL
Trigger: CAATAAGCAACAGCGCATCAAAGAGGAGGGGGAGTG...GTTTGTTGGAAAGTAACTGTGAGAACCCAGTTTCCCGTCCATCTCCCTTAGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264731.8
ENST00000354600.10
CDS-3UTR CAA 90 bp CATGTCAAAGTTGAAGTCATTCCACTCATCTCGGGGTGGGAAAGAGATGGTCTGCAGGGATTTTCAGACTaGCCAGATCTGTTGGCTCCC +
Preference number: 5 (lower is better)
Translates to: HVKVEVIPLISGWERDGLQGFSD*PDLLAP
Trigger: GGGAGCCAACAGATCTGGCAAGTCTGAAAATCCCTG...CAGACCATCTCTTTCCCACCCCGAGATGAGTGGAATGACTTCAACTTTGACATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320472.9
CDS TCA 90 bp TGGTGCTGCTGCTGTTGCTGTTGCCTGTACGTTTCAATTGTGTGCTaGGGAAGGTACTGCATGAGTTCCAGGGACTCTTTGATCTTCAAC +
Preference number: 5 (lower is better)
Translates to: WCCCCCCCLYVSIVC*GRYCMSSRDSLIFN
Trigger: GTTGAAGATCAAAGAGTCCCTGGAACTCATGCAGTACCTTCCTCAGCACACAATTGAAACGTACAGGCAACAGCAACAGCAGCAGCACCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000264731.8
ENST00000320472.9
ENST00000354600.10
ENST00000392460.7
ENST00000392461.7
ENST00000392463.6
ENST00000418709.6
ENST00000437221.5
ENST00000440651.6
ENST00000449992.5
ENST00000456148.1
ENST00000460036.1
CDS TCA 90 bp TGGAGTAATGCTCAATCTGATAGATGGTGGTCAGCCCCTGGGTCGTaGAATAGTCCAGACATGATGAACAGCCCAACCTCGCTAAGAAAC +
Preference number: 5 (lower is better)
Translates to: WSNAQSDRWWSAPGS*NSPDMMNSPTSLRN
Trigger: GTTTCTTAGCGAGGTTGGGCTGTTCATCATGTCTGGACTATTTCACGACCCAGGGGCTGACCACCATCTATCAGATTGAGCATTACTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264731.8
ENST00000354600.10
ENST00000440651.6
ENST00000449992.5
ENST00000456148.1
CDS TCA 90 bp CAGATTGTTTTGGAGTTTCTCTCCGGGGCTCCACAAGCTCATTCCTaGAGCAGGCTGAAAGGAGATGTTTCTGAAGTAAGTGCTGGTGCT +
Preference number: 5 (lower is better)
Translates to: QIVLEFLSGAPQAHS*SRLKGDVSEVSAGA
Trigger: AGCACCAGCACTTACTTCAGAAACATCTCCTTTCAGCCTGCTTCAGGAATGAGCTTGTGGAGCCCCGGAGAGAAACTCCAAAACAATCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418709.6
ENST00000437221.5
CDS-3UTR CAA 90 bp GTAAGAGGTAGCCTCTTACTTCTCCTTCCCCTAAGAAATCAGACAAGAGGAAGGGCAATCTGTCCCTCGTaGAATTCACGGCTCAGCTCA +
Preference number: 5 (lower is better)
Translates to: VRGSLLLLLPLRNQTRGRAICPS*NSRLSS
Trigger: TGAGCTGAGCCGTGAATTCAACGAGGGACAGATTGC...CCTTCCTCTTGTCTGATTTCTTAGGGGAAGGAGAAGTAAGAGGCTACCTCTTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264731.8
ENST00000320472.9
ENST00000354600.10
CDS-3UTR CAA 90 bp ATGATCACCTCGCTGCCCAGCAGTACACTTGACACCTTCGTTTCTTACTACTTGGATCGGTTTGGGGGCTaGGAATGTCTAAAGAAGACG +
Preference number: 5 (lower is better)
Translates to: MITSLPSSTLDTFVSYYLDRFGG*ECLKKT
Trigger: CGTCTTCTTTAGACATTCCAAGCCCCCAAACCGATC...CAAGTAGTAAGAAACGAAGGTGTCAAGTGTACTGCTGGGCAGCGAGGTGATCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000418709.6
ENST00000437221.5
CDS-3UTR CAA 90 bp CCAACATACAGTGGCAGAGGCAGGTACACAGCATTAAGAAATGTTCTACCTACAGCAATCTGTCCCTCGTaGAATTCACGGCTCAGCTCA +
Preference number: 5 (lower is better)
Translates to: PTYSGRGRYTALRNVLPTAICPS*NSRLSS
Trigger: TGAGCTGAGCCGTGAATTCAACGAGGGACAGATTGC...TGTAGGTAGAACATTTCTTAATGCTGTGTACCTGCCTCTGCCACTGTATGTTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418709.6
ENST00000437221.5
CDS-3UTR CAA 90 bp CTTATTGCGGCGAGCATCCATGTCAAAGTTGAAGTCATTCCACTCATCTCGGGGTGTACTGTCCGAAACTaGCTGCTTTCTGATGCTATC +
Preference number: 5 (lower is better)
Translates to: LIAASIHVKVEVIPLISGCTVRN*LLSDAI
Trigger: GATAGCATCAGAAAGCAGCAAGTTTCGGACAGTACA...CCCCGAGATGAGTGGAATGACTTCAACTTTGACATGGATGCTCGCCGCAATAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320472.9
CDS-3UTR CAA 90 bp TCCCTAAGGGAGATGGACGGGAAACTGGGTTCTCACAGTTACTTTCCAACAAACCTGCTGCTGTTGCTGTaGCCTGTACGTTTCAATTGT +
Preference number: 5 (lower is better)
Translates to: SLREMDGKLGSHSYFPTNLLLLL*PVRFNC
Trigger: ACAATTGAAACGTACAGGCAACAGCAACAGCAGCAG...GTTTGTTGGAAAGTAACTGTGAGAACCCAGTTTCCCGTCCATCTCCCTTAGGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264731.8
ENST00000354600.10
CDS-3UTR CAA 90 bp CATGTCAAAGTTGAAGTCATTCCACTCATCTCGGGGTGGGAAAGAGATGGTCTGCTGCTGCTGTTGCTGTaGCCTGTACGTTTCAATTGT +
Preference number: 5 (lower is better)
Translates to: HVKVEVIPLISGWERDGLLLLLL*PVRFNC
Trigger: ACAATTGAAACGTACAGGCAACAGCAACAGCAGCAG...CAGACCATCTCTTTCCCACCCCGAGATGAGTGGAATGACTTCAACTTTGACATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320472.9
CDS-3UTR CAA 90 bp TCTTTAATTTCCAGTCCAGGAGTGCTGATTTTAACACGTCTGCTTGGATCTCACCTGGTGCTGCTGCTGTaGCTGTTGCCTGTACGTTTC +
Preference number: 5 (lower is better)
Translates to: SLISSPGVLILTRLLGSHLVLLL*LLPVRF
Trigger: GAAACGTACAGGCAACAGCAACAGCAGCAGCACCAG...GTGAGATCCAAGCAGACGTGTTAAAATCAGCACTCCTGGACTGGAAATTAAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418709.6
ENST00000437221.5
CDS-3UTR CAA 90 bp AGAGGTAGCCTCTTACTTCTCCTTCCCCTAAGAAATCAGACAAGAGGAAGGGGACAGGGATTTTCAGACTaGCCAGATCATCCATGGAGT +
Preference number: 5 (lower is better)
Translates to: RGSLLLLLPLRNQTRGRGQGFSD*PDHPWS
Trigger: ACTCCATGGATGATCTGGCAAGTCTGAAAATCCCTG...TCCCCTTCCTCTTGTCTGATTTCTTAGGGGAAGGAGAAGTAAGAGGCTACCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000264731.8
ENST00000354600.10
CDS-3UTR CAA 90 bp TCCCTAAGGGAGATGGACGGGAAACTGGGTTCTCACAGTTACTTTCCAACAAACCAGGGATTTTCAGACTaGCCAGATCATCCATGGAGT +
Preference number: 5 (lower is better)
Translates to: SLREMDGKLGSHSYFPTNQGFSD*PDHPWS
Trigger: ACTCCATGGATGATCTGGCAAGTCTGAAAATCCCTG...GTTTGTTGGAAAGTAACTGTGAGAACCCAGTTTCCCGTCCATCTCCCTTAGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264731.8
ENST00000354600.10
CDS-3UTR CAA 90 bp ACAGTGGTTCCTCACCCACCAATGGCCGGTCTAAGGATACAAAATCTGCAGAAATGCCCAGCAGTACACTaGACACCTTCGTTTCTTACT +
Preference number: 5 (lower is better)
Translates to: TVVPHPPMAGLRIQNLQKCPAVH*TPSFLT
Trigger: AGTAAGAAACGAAGGTGTCAAGTGTACTGCTGGGCA...TTTCTGCAGATTTTGTATCCTTAGACCGGCCATTGGTGGGTGAGGAACCACTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418709.6
ENST00000437221.5
CDS-3UTR CAA 90 bp TTCTTCCCCTTAATGGGTTTGCAAAGCTGCATGCTTGTTGCAGAAGTTTACAGTGCAATCTGTCCCTCGTaGAATTCACGGCTCAGCTCA +
Preference number: 5 (lower is better)
Translates to: FFPLMGLQSCMLVAEVYSAICPS*NSRLSS
Trigger: TGAGCTGAGCCGTGAATTCAACGAGGGACAGATTGC...ACTGTAAACTTCTGCAACAAGCATGCAGCTTTGCAAACCCATTAAGGGGAAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264731.8
ENST00000354600.10
CDS-3UTR CAA 90 bp CGCTGCCCAGCAGTACACTTGACACCTTCGTTTCTTACTACTTGCAATATTATTGCAATCTGTCCCTCGTaGAATTCACGGCTCAGCTCA +
Preference number: 5 (lower is better)
Translates to: RCPAVHLTPSFLTTCNIIAICPS*NSRLSS
Trigger: TGAGCTGAGCCGTGAATTCAACGAGGGACAGATTGC...AATAATATTGCAAGTAGTAAGAAACGAAGGTGTCAAGTGTACTGCTGGGCAGCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418709.6
ENST00000437221.5
CDS-3UTR CAA 90 bp CCTTTGAGCAGTTGGGTCTCTGAGCCAAAGTGTCTTCAAGTCCTGTTTATGAGGTGTACTGTCCGAAACTaGCTGCTTTCTGATGCTATC +
Preference number: 5 (lower is better)
Translates to: PLSSWVSEPKCLQVLFMRCTVRN*LLSDAI
Trigger: GATAGCATCAGAAAGCAGCAAGTTTCGGACAGTACA...CCTCATAAACAGGACTTGAAGACACTTTGGCTCAGAGACCCAACTGCTCAAAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418709.6
ENST00000437221.5
CDS-3UTR CAA 90 bp TCCCTAAGGGAGATGGACGGGAAACTGGGTTCTCACAGTTACTTTCCAACAAACTACCATCACCGTTCTTaGTACTGTCCGAAACTTGCT +
Preference number: 5 (lower is better)
Translates to: SLREMDGKLGSHSYFPTNYHHRS*YCPKLA
Trigger: AGCAAGTTTCGGACAGTACAAAGAACGGTGATGGTA...GTTTGTTGGAAAGTAACTGTGAGAACCCAGTTTCCCGTCCATCTCCCTTAGGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264731.8
ENST00000354600.10
CDS-3UTR CAA 90 bp ATGATCACCTCGCTGCCCAGCAGTACACTTGACACCTTCGTTTCTTACTACTTGTACCATCACCGTTCTTaGTACTGTCCGAAACTTGCT +
Preference number: 5 (lower is better)
Translates to: MITSLPSSTLDTFVSYYLYHHRS*YCPKLA
Trigger: AGCAAGTTTCGGACAGTACAAAGAACGGTGATGGTA...CAAGTAGTAAGAAACGAAGGTGTCAAGTGTACTGCTGGGCAGCGAGGTGATCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418709.6
ENST00000437221.5
CDS-3UTR CAA 90 bp TCCCTAAGGGAGATGGACGGGAAACTGGGTTCTCACAGTTACTTTCCAACAAACGGGGATCTTCGTTTCTaGATGGATGTCATCTGGATA +
Preference number: 5 (lower is better)
Translates to: SLREMDGKLGSHSYFPTNGDLRF*MDVIWI
Trigger: TATCCAGATGACATCCATCAAGAAACGAAGATCCCC...GTTTGTTGGAAAGTAACTGTGAGAACCCAGTTTCCCGTCCATCTCCCTTAGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264731.8
ENST00000354600.10
CDS-3UTR CAA 90 bp TGCTTATTGCGGCGAGCATCCATGTCAAAGTTGAAGTCATTCCACTCATCTCGGCTCACAGAAGGCAGCTaGTTCATGCTGTTCATTTTG +
Preference number: 5 (lower is better)
Translates to: CLLRRASMSKLKSFHSSRLTEGS*FMLFIL
Trigger: CAAAATGAACAGCATGAACAAGCTGCCTTCTGTGAG...CCGAGATGAGTGGAATGACTTCAACTTTGACATGGATGCTCGCCGCAATAAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320472.9
CDS-3UTR CAA 90 bp CAAAAACTTTTCAATTCTTCAGCTAACTGCATTGAGCTGAGGCCACAAGAACTCCCCATCATGGGAATGTaGGCTCCCATGCCATCAGGA +
Preference number: 5 (lower is better)
Translates to: QKLFNSSANCIELRPQELPIMGM*APMPSG
Trigger: TCCTGATGGCATGGGAGCCAACATTCCCATGATGGG...GAGTTCTTGTGGCCTCAGCTCAATGCAGTTAGCTGAAGAATTGAAAAGTTTTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000264731.8
ENST00000354600.10
CDS-3UTR CAA 90 bp AGCTCTAGATACCTATCACCATACATGATACCCCTTAAGGGAAGGAGTATAGACATGCGCTGTTGCTTATaGCGGCGAGCATCCATGTCA +
Preference number: 5 (lower is better)
Translates to: SSRYLSPYMIPLKGRSIDMRCCL*RRASMS
Trigger: TGACATGGATGCTCGCCGCAATAAGCAACAGCGCAT...GTCTATACTCCTTCCCTTAAGGGGTATCATGTATGGTGATAGGTATCTAGAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264731.8
ENST00000354600.10
CDS-3UTR CAA 90 bp TTCTTCCCCTTAATGGGTTTGCAAAGCTGCATGCTTGTTGCAGAAGTTTACAGTATGCGCTGTTGCTTATaGCGGCGAGCATCCATGTCA +
Preference number: 5 (lower is better)
Translates to: FFPLMGLQSCMLVAEVYSMRCCL*RRASMS
Trigger: TGACATGGATGCTCGCCGCAATAAGCAACAGCGCAT...ACTGTAAACTTCTGCAACAAGCATGCAGCTTTGCAAACCCATTAAGGGGAAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264731.8
ENST00000354600.10
CDS-3UTR CAA 90 bp AGAGGTAGCCTCTTACTTCTCCTTCCCCTAAGAAATCAGACAAGAGGAAGGGGATGCAAAGCTGCATGCTaGTTGCAGAAGTTTACAGTG +
Preference number: 5 (lower is better)
Translates to: RGSLLLLLPLRNQTRGRGCKAAC*LQKFTV
Trigger: CACTGTAAACTTCTGCAACAAGCATGCAGCTTTGCA...TCCCCTTCCTCTTGTCTGATTTCTTAGGGGAAGGAGAAGTAAGAGGCTACCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264731.8
ENST00000354600.10
CDS-3UTR CAA 90 bp AGAGGTAGCCTCTTACTTCTCCTTCCCCTAAGAAATCAGACAAGAGGAAGGGGACTGTGGCTCACTAAATaGAGTCTGGGCATTGTTTTC +
Preference number: 5 (lower is better)
Translates to: RGSLLLLLPLRNQTRGRGLWLTK*SLGIVF
Trigger: GAAAACAATGCCCAGACTCAATTTAGTGAGCCACAG...TCCCCTTCCTCTTGTCTGATTTCTTAGGGGAAGGAGAAGTAAGAGGCTACCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000354600.10
CDS-3UTR CAA 90 bp CCTTTGAGCAGTTGGGTCTCTGAGCCAAAGTGTCTTCAAGTCCTGTTTATGAGGCTGTGGCTCACTAAATaGAGTCTGGGCATTGTTTTC +
Preference number: 5 (lower is better)
Translates to: PLSSWVSEPKCLQVLFMRLWLTK*SLGIVF
Trigger: GAAAACAATGCCCAGACTCAATTTAGTGAGCCACAG...CCTCATAAACAGGACTTGAAGACACTTTGGCTCAGAGACCCAACTGCTCAAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437221.5
CDS-3UTR CAA 90 bp CCAACATACAGTGGCAGAGGCAGGTACACAGCATTAAGAAATGTTCTACCTACAAGACGTCAGATTGTTTaGGAGTTTCTCTCCGGGGCT +
Preference number: 5 (lower is better)
Translates to: PTYSGRGRYTALRNVLPTRRQIV*EFLSGA
Trigger: AGCCCCGGAGAGAAACTCCAAAACAATCTGACGTCT...TGTAGGTAGAACATTTCTTAATGCTGTGTACCTGCCTCTGCCACTGTATGTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418709.6
ENST00000437221.5
CDS-3UTR CAA 90 bp GCTTGGATCTCACTTACTCAAAACGTAAGTCTCCTGGCTAAATGCACTGAACAGGATCGGTTTGGGGGCTaGGAATGTCTAAAGAAGACG +
Preference number: 5 (lower is better)
Translates to: AWISLTQNVSLLAKCTEQDRFGG*ECLKKT
Trigger: CGTCTTCTTTAGACATTCCAAGCCCCCAAACCGATC...CTGTTCAGTGCATTTAGCCAGGAGACTTACGTTTTGAGTAAGTGAGATCCAAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000418709.6
ENST00000437221.5
CDS CCA 90 bp ACATATAGGCTGTTCCAGAAAATCCCAGATATGCTGGAAAACCTCTaGACTGAGGAATTCATTTGTCTGTGTGCTCTGGGACATGGTGGA +
Preference number: 5 (lower is better)
Translates to: TYRLFQKIPDMLENL*TEEFICLCALGHGG
Trigger: TCCACCATGTCCCAGAGCACACAGACAAATGAATTCCTCAGTCCAGAGGTTTTCCAGCATATCTGGGATTTTCTGGAACAGCCTATATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000264731.8
ENST00000320472.9
ENST00000392460.7
ENST00000418709.6
ENST00000440651.6
ENST00000486398.1
CDS-3UTR CAA 90 bp GCTTGGATCTCACTTACTCAAAACGTAAGTCTCCTGGCTAAATGCACTGAACAGGCCTGTACGTTTCAATaGTGTGCTGAGGAAGGTACT +
Preference number: 5 (lower is better)
Translates to: AWISLTQNVSLLAKCTEQACTFQ*CAEEGT
Trigger: AGTACCTTCCTCAGCACACAATTGAAACGTACAGGC...CTGTTCAGTGCATTTAGCCAGGAGACTTACGTTTTGAGTAAGTGAGATCCAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418709.6
ENST00000437221.5
CDS-3UTR CAA 90 bp CCAACATACAGTGGCAGAGGCAGGTACACAGCATTAAGAAATGTTCTACCTACAGCCTGTACGTTTCAATaGTGTGCTGAGGAAGGTACT +
Preference number: 5 (lower is better)
Translates to: PTYSGRGRYTALRNVLPTACTFQ*CAEEGT
Trigger: AGTACCTTCCTCAGCACACAATTGAAACGTACAGGC...TGTAGGTAGAACATTTCTTAATGCTGTGTACCTGCCTCTGCCACTGTATGTTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418709.6
ENST00000437221.5
CDS-3UTR CAA 90 bp TCCCTAAGGGAGATGGACGGGAAACTGGGTTCTCACAGTTACTTTCCAACAAACGCATCCATGTCAAAGTaGAAGTCATTCCACTCATCT +
Preference number: 5 (lower is better)
Translates to: SLREMDGKLGSHSYFPTNASMSK*KSFHSS
Trigger: AGATGAGTGGAATGACTTCAACTTTGACATGGATGC...GTTTGTTGGAAAGTAACTGTGAGAACCCAGTTTCCCGTCCATCTCCCTTAGGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264731.8
ENST00000354600.10
CDS-3UTR CAA 90 bp CAAAAACTTTTCAATTCTTCAGCTAACTGCATTGAGCTGAGGCCACAAGAACTCCTCTTTGATGCGCTGTaGCTTATTGCGGCGAGCATC +
Preference number: 5 (lower is better)
Translates to: QKLFNSSANCIELRPQELLFDAL*LIAASI
Trigger: GATGCTCGCCGCAATAAGCAACAGCGCATCAAAGAG...GAGTTCTTGTGGCCTCAGCTCAATGCAGTTAGCTGAAGAATTGAAAAGTTTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264731.8
ENST00000354600.10
CDS-3UTR CAA 90 bp CAAAAACTTTTCAATTCTTCAGCTAACTGCATTGAGCTGAGGCCACAAGAACTCCACTCCCCCTCCTCTTaGATGCGCTGTTGCTTATTG +
Preference number: 5 (lower is better)
Translates to: QKLFNSSANCIELRPQELHSPSS*MRCCLL
Trigger: CAATAAGCAACAGCGCATCAAAGAGGAGGGGGAGTG...GAGTTCTTGTGGCCTCAGCTCAATGCAGTTAGCTGAAGAATTGAAAAGTTTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000264731.8
ENST00000354600.10
CDS-3UTR CAA 90 bp TCTTTAATTTCCAGTCCAGGAGTGCTGATTTTAACACGTCTGCTTGGATCTCACAGACGTCAGATTGTTTaGGAGTTTCTCTCCGGGGCT +
Preference number: 5 (lower is better)
Translates to: SLISSPGVLILTRLLGSHRRQIV*EFLSGA
Trigger: AGCCCCGGAGAGAAACTCCAAAACAATCTGACGTCT...GTGAGATCCAAGCAGACGTGTTAAAATCAGCACTCCTGGACTGGAAATTAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418709.6
ENST00000437221.5
CDS-3UTR CAA 90 bp ACAGTGGTTCCTCACCCACCAATGGCCGGTCTAAGGATACAAAATCTGCAGAAAAAAGAAGACGTCAGATaGTTTTGGAGTTTCTCTCCG +
Preference number: 5 (lower is better)
Translates to: TVVPHPPMAGLRIQNLQKKEDVR*FWSFSP
Trigger: CGGAGAGAAACTCCAAAACAATCTGACGTCTTCTTT...TTTCTGCAGATTTTGTATCCTTAGACCGGCCATTGGTGGGTGAGGAACCACTGT
46% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000418709.6
ENST00000437221.5
CDS CCA 90 bp TTTCTACGAAACGCTGGATGTAAGGGTCAGGGCAGTACTGTAGGGTaGCACACCGTGAAGTTTCAAAATTCATTTCCTTCAACTGTCTTT +
Preference number: 5 (lower is better)
Translates to: FLRNAGCKGQGSTVG*HTVKFQNSFPSTVF
Trigger: AAAGACAGTTGAAGGAAATGAATTTTGAAACTTCACGGTGTGCCACCCTACAGTACTGCCCTGACCCTTACATCCAGCGTTTCGTAGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264731.8
ENST00000320472.9
ENST00000418709.6
ENST00000486398.1
CDS-3UTR CAA 90 bp AGAGGTAGCCTCTTACTTCTCCTTCCCCTAAGAAATCAGACAAGAGGAAGGGGAATGCTAATCTCAATCTaGTTTGTCGCACCATCTTCT +
Preference number: 5 (lower is better)
Translates to: RGSLLLLLPLRNQTRGRGMLISI*FVAPSS
Trigger: AGAAGATGGTGCGACAAACAAGATTGAGATTAGCAT...TCCCCTTCCTCTTGTCTGATTTCTTAGGGGAAGGAGAAGTAAGAGGCTACCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264731.8
ENST00000320472.9
CDS-3UTR CAA 90 bp AAGTGTCTTCAAGTCCTGTTTATGAGGGCTAGATACACACGCACACACATACACGGGGATCTTCGTTTCTaGATGGATGTCATCTGGATA +
Preference number: 5 (lower is better)
Translates to: KCLQVLFMRARYTRTHIHGDLRF*MDVIWI
Trigger: TATCCAGATGACATCCATCAAGAAACGAAGATCCCC...GTGTATGTGTGTGCGTGTGTATCTAGCCCTCATAAACAGGACTTGAAGACACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418709.6
ENST00000437221.5
CDS-3UTR CAA 90 bp CGCTGCCCAGCAGTACACTTGACACCTTCGTTTCTTACTACTTGCAATATTATTCTGCTGCTGTTGCTGTaGCCTGTACGTTTCAATTGT +
Preference number: 5 (lower is better)
Translates to: RCPAVHLTPSFLTTCNIILLLLL*PVRFNC
Trigger: ACAATTGAAACGTACAGGCAACAGCAACAGCAGCAG...AATAATATTGCAAGTAGTAAGAAACGAAGGTGTCAAGTGTACTGCTGGGCAGCG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418709.6
ENST00000437221.5
CDS-3UTR CAA 90 bp GTAAGAGGTAGCCTCTTACTTCTCCTTCCCCTAAGAAATCAGACAAGAGGAAGGGCATCCATGTCAAAGTaGAAGTCATTCCACTCATCT +
Preference number: 5 (lower is better)
Translates to: VRGSLLLLLPLRNQTRGRASMSK*KSFHSS
Trigger: AGATGAGTGGAATGACTTCAACTTTGACATGGATGC...CCTTCCTCTTGTCTGATTTCTTAGGGGAAGGAGAAGTAAGAGGCTACCTCTTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264731.8
ENST00000320472.9
ENST00000354600.10
CDS-3UTR CAA 90 bp TCTTTAATTTCCAGTCCAGGAGTGCTGATTTTAACACGTCTGCTTGGATCTCACTGCCCAGCAGTACACTaGACACCTTCGTTTCTTACT +
Preference number: 5 (lower is better)
Translates to: SLISSPGVLILTRLLGSHCPAVH*TPSFLT
Trigger: AGTAAGAAACGAAGGTGTCAAGTGTACTGCTGGGCA...GTGAGATCCAAGCAGACGTGTTAAAATCAGCACTCCTGGACTGGAAATTAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418709.6
ENST00000437221.5
CDS TCA 90 bp CAACACACACACTTAAAATATAGAGATAGGGCTCTATGGGTACACTaGTCGGTTTGGGGGCTTGGAATGTCTAAAGAAGACGTCAGATTG +
Preference number: 5 (lower is better)
Translates to: QHTHLKYRDRALWVH*SVWGLGMSKEDVRL
Trigger: CAATCTGACGTCTTCTTTAGACATTCCAAGCCCCCAAACCGATCAGTGTACCCATAGAGCCCTATCTCTATATTTTAAGTGTGTGTGTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000418709.6
ENST00000437221.5
CDS-3UTR CAA 90 bp TTCTTCCCCTTAATGGGTTTGCAAAGCTGCATGCTTGTTGCAGAAGTTTACAGTTGTACTGTCCGAAACTaGCTGCTTTCTGATGCTATC +
Preference number: 5 (lower is better)
Translates to: FFPLMGLQSCMLVAEVYSCTVRN*LLSDAI
Trigger: GATAGCATCAGAAAGCAGCAAGTTTCGGACAGTACA...ACTGTAAACTTCTGCAACAAGCATGCAGCTTTGCAAACCCATTAAGGGGAAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264731.8
ENST00000354600.10
CDS-3UTR CAA 90 bp TTCTTCCCCTTAATGGGTTTGCAAAGCTGCATGCTTGTTGCAGAAGTTTACAGTTACCATCACCGTTCTTaGTACTGTCCGAAACTTGCT +
Preference number: 5 (lower is better)
Translates to: FFPLMGLQSCMLVAEVYSYHHRS*YCPKLA
Trigger: AGCAAGTTTCGGACAGTACAAAGAACGGTGATGGTA...ACTGTAAACTTCTGCAACAAGCATGCAGCTTTGCAAACCCATTAAGGGGAAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264731.8
ENST00000354600.10
CDS-3UTR CAA 90 bp CAAAAACTTTTCAATTCTTCAGCTAACTGCATTGAGCTGAGGCCACAAGAACTCGCCTGTACGTTTCAATaGTGTGCTGAGGAAGGTACT +
Preference number: 5 (lower is better)
Translates to: QKLFNSSANCIELRPQELACTFQ*CAEEGT
Trigger: AGTACCTTCCTCAGCACACAATTGAAACGTACAGGC...GAGTTCTTGTGGCCTCAGCTCAATGCAGTTAGCTGAAGAATTGAAAAGTTTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264731.8
ENST00000354600.10
CDS-3UTR CAA 90 bp CTGCCCAGCAGTACACTTGACACCTTCGTTTCTTACTACTTGCAATATTATTACCTGCTGCTGTTGCTGTaGCCTGTACGTTTCAATTGT +
Preference number: 5 (lower is better)
Translates to: LPSSTLDTFVSYYLQYYYLLLLL*PVRFNC
Trigger: ACAATTGAAACGTACAGGCAACAGCAACAGCAGCAG...GTAATAATATTGCAAGTAGTAAGAAACGAAGGTGTCAAGTGTACTGCTGGGCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418709.6
ENST00000437221.5
CDS-3UTR CAA 90 bp AAGGTAAACAAGCCTCTACATGCAGAGTTTTATAGAATAGGAGGGTCTTTAAAACTGGTGCTGCTGCTGTaGCTGTTGCCTGTACGTTTC +
Preference number: 5 (lower is better)
Translates to: KVNKPLHAEFYRIGGSLKLVLLL*LLPVRF
Trigger: GAAACGTACAGGCAACAGCAACAGCAGCAGCACCAG...TTTTAAAGACCCTCCTATTCTATAAAACTCTGCATGTAGAGGCTTGTTTACCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264731.8
ENST00000354600.10
CDS-3UTR CAA 90 bp TTGATGCGCTGTTGCTTATTGCGGCGAGCATCCATGTCAAAGTTGAAGTCATTCAAGATGGAGACTGTATaGAGGTCTGTTTCTGAAGTA +
Preference number: 5 (lower is better)
Translates to: LMRCCLLRRASMSKLKSFKMETV*RSVSEV
Trigger: TACTTCAGAAACAGACCTCAATACAGTCTCCATCTT...GAATGACTTCAACTTTGACATGGATGCTCGCCGCAATAAGCAACAGCGCATCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320472.9
CDS-3UTR CAA 90 bp CACTTTCTAGTGGTTTCTATGCTTACTATCCTTTTACCCCTTACCCTGGCTACTCTCACAGAAGGCAGCTaGTTCATGCTGTTCATTTTG +
Preference number: 5 (lower is better)
Translates to: HFLVVSMLTILLPLTLATLTEGS*FMLFIL
Trigger: CAAAATGAACAGCATGAACAAGCTGCCTTCTGTGAG...AGTAGCCAGGGTAAGGGGTAAAAGGATAGTAAGCATAGAAACCACTAGAAAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000264731.8
ENST00000354600.10
CDS-3UTR CAA 90 bp AGCTCTAGATACCTATCACCATACATGATACCCCTTAAGGGAAGGAGTATAGACCTCACAGAAGGCAGCTaGTTCATGCTGTTCATTTTG +
Preference number: 5 (lower is better)
Translates to: SSRYLSPYMIPLKGRSIDLTEGS*FMLFIL
Trigger: CAAAATGAACAGCATGAACAAGCTGCCTTCTGTGAG...GTCTATACTCCTTCCCTTAAGGGGTATCATGTATGGTGATAGGTATCTAGAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264731.8
ENST00000354600.10
CDS-3UTR CAA 90 bp AGCTCTAGATACCTATCACCATACATGATACCCCTTAAGGGAAGGAGTATAGACGATCGCATGTCGAAATaGCTCAGGGATTTTCAGACT +
Preference number: 5 (lower is better)
Translates to: SSRYLSPYMIPLKGRSIDDRMSK*LRDFQT
Trigger: AGTCTGAAAATCCCTGAGCAATTTCGACATGCGATC...GTCTATACTCCTTCCCTTAAGGGGTATCATGTATGGTGATAGGTATCTAGAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264731.8
ENST00000354600.10
CDS-3UTR CAA 90 bp TTCTTCCCCTTAATGGGTTTGCAAAGCTGCATGCTTGTTGCAGAAGTTTACAGTGATCGCATGTCGAAATaGCTCAGGGATTTTCAGACT +
Preference number: 5 (lower is better)
Translates to: FFPLMGLQSCMLVAEVYSDRMSK*LRDFQT
Trigger: AGTCTGAAAATCCCTGAGCAATTTCGACATGCGATC...ACTGTAAACTTCTGCAACAAGCATGCAGCTTTGCAAACCCATTAAGGGGAAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264731.8
ENST00000354600.10
CDS-3UTR CAA 90 bp ATGATCACCTCGCTGCCCAGCAGTACACTTGACACCTTCGTTTCTTACTACTTGCAAGAAATCATTGTCTaGGTGACAGAAAATACAGTG +
Preference number: 5 (lower is better)
Translates to: MITSLPSSTLDTFVSYYLQEIIV*VTENTV
Trigger: CACTGTATTTTCTGTCACCAAGACAATGATTTCTTG...CAAGTAGTAAGAAACGAAGGTGTCAAGTGTACTGCTGGGCAGCGAGGTGATCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418709.6
ENST00000437221.5
CDS GCA 90 bp CTGAAAGAGGGTTGCCATACCAGGTCATCTGAATCTATGACAATCTaGTATCTCCCATTATGTTCCACATTGCTCATCAATCACCCTATT +
Preference number: 5 (lower is better)
Translates to: LKEGCHTRSSESMTI*YLPLCSTLLINHPI
Trigger: AATAGGGTGATTGATGAGCAATGTGGAACATAATGGGAGATAGCAGATTGTCATAGATTCAGATGACCTGGTATGGCAACCCTCTTTCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460036.1
CDS-3UTR CAA 90 bp GCTTGGATCTCACTTACTCAAAACGTAAGTCTCCTGGCTAAATGCACTGAACAGATGCTAATCTCAATCTaGTTTGTCGCACCATCTTCT +
Preference number: 5 (lower is better)
Translates to: AWISLTQNVSLLAKCTEQMLISI*FVAPSS
Trigger: AGAAGATGGTGCGACAAACAAGATTGAGATTAGCAT...CTGTTCAGTGCATTTAGCCAGGAGACTTACGTTTTGAGTAAGTGAGATCCAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418709.6
CDS-3UTR CAA 90 bp CAAAAACTTTTCAATTCTTCAGCTAACTGCATTGAGCTGAGGCCACAAGAACTCTGTACTGTCCGAAACTaGCTGCTTTCTGATGCTATC +
Preference number: 5 (lower is better)
Translates to: QKLFNSSANCIELRPQELCTVRN*LLSDAI
Trigger: GATAGCATCAGAAAGCAGCAAGTTTCGGACAGTACA...GAGTTCTTGTGGCCTCAGCTCAATGCAGTTAGCTGAAGAATTGAAAAGTTTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264731.8
ENST00000354600.10
CDS-3UTR CAA 90 bp AAGGTAAACAAGCCTCTACATGCAGAGTTTTATAGAATAGGAGGGTCTTTAAAACTCTTTGATGCGCTGTaGCTTATTGCGGCGAGCATC +
Preference number: 5 (lower is better)
Translates to: KVNKPLHAEFYRIGGSLKLFDAL*LIAASI
Trigger: GATGCTCGCCGCAATAAGCAACAGCGCATCAAAGAG...TTTTAAAGACCCTCCTATTCTATAAAACTCTGCATGTAGAGGCTTGTTTACCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264731.8
ENST00000354600.10
CDS-3UTR CAA 90 bp AGCTCTAGATACCTATCACCATACATGATACCCCTTAAGGGAAGGAGTATAGACGCCACGCTGGCCCTTTaGCACTTTAAAATTAAAATG +
Preference number: 5 (lower is better)
Translates to: SSRYLSPYMIPLKGRSIDATLAL*HFKIKM
Trigger: CATTTTAATTTTAAAGTGCAAAAGGGCCAGCGTGGC...GTCTATACTCCTTCCCTTAAGGGGTATCATGTATGGTGATAGGTATCTAGAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000264731.8
ENST00000354600.10
CDS-3UTR CAA 90 bp CACTTTCTAGTGGTTTCTATGCTTACTATCCTTTTACCCCTTACCCTGGCTACTAAAAGAGATTGTAGATaGGCTTCTGGCTCCCCAAAA +
Preference number: 5 (lower is better)
Translates to: HFLVVSMLTILLPLTLATKRDCR*ASGSPK
Trigger: TTTTGGGGAGCCAGAAGCCAATCTACAATCTCTTTT...AGTAGCCAGGGTAAGGGGTAAAAGGATAGTAAGCATAGAAACCACTAGAAAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000264731.8
ENST00000354600.10
CDS-3UTR CAA 90 bp AGCTCTAGATACCTATCACCATACATGATACCCCTTAAGGGAAGGAGTATAGACAAAAGAGATTGTAGATaGGCTTCTGGCTCCCCAAAA +
Preference number: 5 (lower is better)
Translates to: SSRYLSPYMIPLKGRSIDKRDCR*ASGSPK
Trigger: TTTTGGGGAGCCAGAAGCCAATCTACAATCTCTTTT...GTCTATACTCCTTCCCTTAAGGGGTATCATGTATGGTGATAGGTATCTAGAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000264731.8
ENST00000354600.10
CDS-3UTR CAA 90 bp CGCTGCCCAGCAGTACACTTGACACCTTCGTTTCTTACTACTTGCAATATTATTAAAGAAGACGTCAGATaGTTTTGGAGTTTCTCTCCG +
Preference number: 5 (lower is better)
Translates to: RCPAVHLTPSFLTTCNIIKEDVR*FWSFSP
Trigger: CGGAGAGAAACTCCAAAACAATCTGACGTCTTCTTT...AATAATATTGCAAGTAGTAAGAAACGAAGGTGTCAAGTGTACTGCTGGGCAGCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418709.6
ENST00000437221.5
CDS-3UTR CAA 90 bp CACTTTCTAGTGGTTTCTATGCTTACTATCCTTTTACCCCTTACCCTGGCTACTAAGATGGAGACTGTATaGAGGTCTGTTTCTGAAGTA +
Preference number: 5 (lower is better)
Translates to: HFLVVSMLTILLPLTLATKMETV*RSVSEV
Trigger: TACTTCAGAAACAGACCTCAATACAGTCTCCATCTT...AGTAGCCAGGGTAAGGGGTAAAAGGATAGTAAGCATAGAAACCACTAGAAAGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264731.8
ENST00000354600.10
CDS-3UTR CAA 90 bp CAAAAACTTTTCAATTCTTCAGCTAACTGCATTGAGCTGAGGCCACAAGAACTCGCCACGCTGGCCCTTTaGCACTTTAAAATTAAAATG +
Preference number: 5 (lower is better)
Translates to: QKLFNSSANCIELRPQELATLAL*HFKIKM
Trigger: CATTTTAATTTTAAAGTGCAAAAGGGCCAGCGTGGC...GAGTTCTTGTGGCCTCAGCTCAATGCAGTTAGCTGAAGAATTGAAAAGTTTTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000264731.8
ENST00000354600.10
CDS-3UTR CAA 90 bp TTCTTCCCCTTAATGGGTTTGCAAAGCTGCATGCTTGTTGCAGAAGTTTACAGTATGTTAGCTGTAAGATaGATCAATGCTGCTGTCCTT +
Preference number: 5 (lower is better)
Translates to: FFPLMGLQSCMLVAEVYSMLAVR*INAAVL
Trigger: AAGGACAGCAGCATTGATCAATCTTACAGCTAACAT...ACTGTAAACTTCTGCAACAAGCATGCAGCTTTGCAAACCCATTAAGGGGAAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354600.10
CDS-3UTR CAA 90 bp CCAACATACAGTGGCAGAGGCAGGTACACAGCATTAAGAAATGTTCTACCTACACTTTCTTGTAAAGGTTaGAGTCCCTTCAAAAGATTC +
Preference number: 5 (lower is better)
Translates to: PTYSGRGRYTALRNVLPTLSCKG*SPFKRF
Trigger: GAATCTTTTGAAGGGACTCAAACCTTTACAAGAAAG...TGTAGGTAGAACATTTCTTAATGCTGTGTACCTGCCTCTGCCACTGTATGTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418709.6
ENST00000437221.5
CDS-3UTR CAA 90 bp GCTTGGATCTCACTTACTCAAAACGTAAGTCTCCTGGCTAAATGCACTGAACAGTCTCCACCCACAAAGTaGATTACTTTTGGTAATGAT +
Preference number: 5 (lower is better)
Translates to: AWISLTQNVSLLAKCTEQSPPTK*ITFGND
Trigger: ATCATTACCAAAAGTAATCAACTTTGTGGGTGGAGA...CTGTTCAGTGCATTTAGCCAGGAGACTTACGTTTTGAGTAAGTGAGATCCAAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418709.6
ENST00000437221.5
CDS GCA 90 bp GATGCTACCTTATCCTTCTGCACCCAGATATTTCCCCAATTATCATaGACTAGGTCTCAGAATTCTTCTCATTACAGCATTCAAACAAGT +
Preference number: 5 (lower is better)
Translates to: DATLSFCTQIFPQLS*TRSQNSSHYSIQTS
Trigger: ACTTGTTTGAATGCTGTAATGAGAAGAATTCTGAGACCTAGTGCATGATAATTGGGGAAATATCTGGGTGCAGAAGGATAAGGTAGCATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460036.1
CDS-3UTR CAA 90 bp ATGGTAAACAACTACGTAAGGGCAATATTACTGGGGTGGATTTGTCTTTCTATTTGTACTGTCCGAAACTaGCTGCTTTCTGATGCTATC +
Preference number: 5 (lower is better)
Translates to: MVNNYVRAILLGWICLSICTVRN*LLSDAI
Trigger: GATAGCATCAGAAAGCAGCAAGTTTCGGACAGTACA...AATAGAAAGACAAATCCACCCCAGTAATATTGCCCTTACGTAGTTGTTTACCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418709.6
ENST00000437221.5
CDS-3UTR CAA 90 bp ATGGTAAACAACTACGTAAGGGCAATATTACTGGGGTGGATTTGTCTTTCTATTTACCATCACCGTTCTTaGTACTGTCCGAAACTTGCT +
Preference number: 5 (lower is better)
Translates to: MVNNYVRAILLGWICLSIYHHRS*YCPKLA
Trigger: AGCAAGTTTCGGACAGTACAAAGAACGGTGATGGTA...AATAGAAAGACAAATCCACCCCAGTAATATTGCCCTTACGTAGTTGTTTACCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418709.6
ENST00000437221.5
CDS-3UTR CAA 90 bp TCTGCAGAAAACATCCTTTCTTGTAAAGGTTTGAGTCCCTTCAAAAGATTCTCTGGGGATCTTCGTTTCTaGATGGATGTCATCTGGATA +
Preference number: 5 (lower is better)
Translates to: SAENILSCKGLSPFKRFSGDLRF*MDVIWI
Trigger: TATCCAGATGACATCCATCAAGAAACGAAGATCCCC...AGAGAATCTTTTGAAGGGACTCAAACCTTTACAAGAAAGGATGTTTTCTGCAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000418709.6
ENST00000437221.5
CDS-3UTR CAA 90 bp AAGGTAAACAAGCCTCTACATGCAGAGTTTTATAGAATAGGAGGGTCTTTAAAAGCCTGTACGTTTCAATaGTGTGCTGAGGAAGGTACT +
Preference number: 5 (lower is better)
Translates to: KVNKPLHAEFYRIGGSLKACTFQ*CAEEGT
Trigger: AGTACCTTCCTCAGCACACAATTGAAACGTACAGGC...TTTTAAAGACCCTCCTATTCTATAAAACTCTGCATGTAGAGGCTTGTTTACCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264731.8
ENST00000354600.10
CDS-3UTR CAA 90 bp CGCTGCCCAGCAGTACACTTGACACCTTCGTTTCTTACTACTTGCAATATTATTAAAGACATCTTAAGTTaGAGACCTGCTCAAAAGCTT +
Preference number: 5 (lower is better)
Translates to: RCPAVHLTPSFLTTCNIIKDILS*RPAQKL
Trigger: AAGCTTTTGAGCAGGTCTCAAACTTAAGATGTCTTT...AATAATATTGCAAGTAGTAAGAAACGAAGGTGTCAAGTGTACTGCTGGGCAGCG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418709.6
ENST00000437221.5
CDS-3UTR CAA 90 bp CGCTGCCCAGCAGTACACTTGACACCTTCGTTTCTTACTACTTGCAATATTATTTCTCCACCCACAAAGTaGATTACTTTTGGTAATGAT +
Preference number: 5 (lower is better)
Translates to: RCPAVHLTPSFLTTCNIISPPTK*ITFGND
Trigger: ATCATTACCAAAAGTAATCAACTTTGTGGGTGGAGA...AATAATATTGCAAGTAGTAAGAAACGAAGGTGTCAAGTGTACTGCTGGGCAGCG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418709.6
ENST00000437221.5
CDS-3UTR CAA 90 bp AAGGTAAACAAGCCTCTACATGCAGAGTTTTATAGAATAGGAGGGTCTTTAAAATGCAAAGCTGCATGCTaGTTGCAGAAGTTTACAGTG +
Preference number: 5 (lower is better)
Translates to: KVNKPLHAEFYRIGGSLKCKAAC*LQKFTV
Trigger: CACTGTAAACTTCTGCAACAAGCATGCAGCTTTGCA...TTTTAAAGACCCTCCTATTCTATAAAACTCTGCATGTAGAGGCTTGTTTACCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264731.8
ENST00000354600.10
CDS-3UTR CAA 90 bp CTGCCCAGCAGTACACTTGACACCTTCGTTTCTTACTACTTGCAATATTATTACCTTTCTTGTAAAGGTTaGAGTCCCTTCAAAAGATTC +
Preference number: 5 (lower is better)
Translates to: LPSSTLDTFVSYYLQYYYLSCKG*SPFKRF
Trigger: GAATCTTTTGAAGGGACTCAAACCTTTACAAGAAAG...GTAATAATATTGCAAGTAGTAAGAAACGAAGGTGTCAAGTGTACTGCTGGGCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418709.6
ENST00000437221.5
CDS-3UTR CAA 90 bp CCCTTTCAATCTTTAATTTCCAGTCCAGGAGTGCTGATTTTAACACGTCTGCTTAAAGACATCTTAAGTTaGAGACCTGCTCAAAAGCTT +
Preference number: 5 (lower is better)
Translates to: PFQSLISSPGVLILTRLLKDILS*RPAQKL
Trigger: AAGCTTTTGAGCAGGTCTCAAACTTAAGATGTCTTT...AAGCAGACGTGTTAAAATCAGCACTCCTGGACTGGAAATTAAAGATTGAAAGGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418709.6
ENST00000437221.5
CDS-3UTR CAA 90 bp TCTGCAGAAAACATCCTTTCTTGTAAAGGTTTGAGTCCCTTCAAAAGATTCTCTCAAGAAATCATTGTCTaGGTGACAGAAAATACAGTG +
Preference number: 5 (lower is better)
Translates to: SAENILSCKGLSPFKRFSQEIIV*VTENTV
Trigger: CACTGTATTTTCTGTCACCAAGACAATGATTTCTTG...AGAGAATCTTTTGAAGGGACTCAAACCTTTACAAGAAAGGATGTTTTCTGCAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000418709.6
ENST00000437221.5
CDS GCA 90 bp TTACAGCATTCAAACAAGTCACTTTATATTATAGTAAAGCCTATTTaGTATCCCTGGTCTACAGTGTTATTCCCAAAAGTGGATAGTGTG +
Preference number: 5 (lower is better)
Translates to: LQHSNKSLYIIVKPI*YPWSTVLFPKVDSV
Trigger: CACACTATCCACTTTTGGGAATAACACTGTAGACCAGGGATAGCAAATAGGCTTTACTATAATATAAAGTGACTTGTTTGAATGCTGTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460036.1
CDS-3UTR CAA 90 bp AAGGTAAACAAGCCTCTACATGCAGAGTTTTATAGAATAGGAGGGTCTTTAAAAGATCTACTCAAAGGTTaGATGTGGCATGTATTTAGA +
Preference number: 5 (lower is better)
Translates to: KVNKPLHAEFYRIGGSLKDLLKG*MWHVFR
Trigger: TCTAAATACATGCCACATCAAACCTTTGAGTAGATC...TTTTAAAGACCCTCCTATTCTATAAAACTCTGCATGTAGAGGCTTGTTTACCTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264731.8
ENST00000354600.10
CDS GCA 72 bp TGGTGGACGAGGAGCCGTTCTGAATCTGCTGGTCCATaGTGTTCAGGAGCCCCAGGTTCGTGTACTGTGGCC +
Preference number: 6 (lower is better)
Translates to: WWTRSRSESAGP*CSGAPGSCTVA
Trigger: GGCCACAGTACACGAACCTGGGGCTCCTGAACAGCATGGACCAGCAGATTCAGAACGGCTCCTCGTCCACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264731.8
ENST00000320472.9
ENST00000392460.7
ENST00000418709.6
ENST00000440651.6
CDS CCA 72 bp GCAATCTGTCCCTCGTTGAATTCACGGCTCAGCTCATaGTTGGGGCACCGCTTCACCACCTCCGTGACGTGC +
Preference number: 6 (lower is better)
Translates to: AICPSLNSRLSS*LGHRFTTSVTC
Trigger: GCACGTCACGGAGGTGGTGAAGCGGTGCCCCAACCATGAGCTGAGCCGTGAATTCAACGAGGGACAGATTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000264731.8
ENST00000320472.9
ENST00000354600.10
ENST00000392460.7
ENST00000392461.7
ENST00000392463.6
ENST00000418709.6
ENST00000437221.5
ENST00000440651.6
ENST00000449992.5
ENST00000456148.1
ENST00000460036.1
CDS GCA 72 bp GGGAGGAGAATTCGTGGAGCTGCCGGTGGTCCAGGATaGCCTTCCAGATCGCATGTCGAAATTGCTCAGGGA +
Preference number: 6 (lower is better)
Translates to: GRRIRGAAGGPG*PSRSHVEIAQG
Trigger: TCCCTGAGCAATTTCGACATGCGATCTGGAAGGGCATCCTGGACCACCGGCAGCTCCACGAATTCTCCTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000264731.8
ENST00000320472.9
ENST00000354600.10
ENST00000440651.6
ENST00000449992.5
ENST00000456148.1
CDS CCA 72 bp CGCTGTTCTGCGCGTGGTCTGTGTTATAGGGACTGGTaGACGAGGAGCCGTTCTGAATCTGCTGGTCCATGC +
Preference number: 6 (lower is better)
Translates to: RCSARGLCYRDW*TRSRSESAGPC
Trigger: GCATGGACCAGCAGATTCAGAACGGCTCCTCGTCCACCAGTCCCTATAACACAGACCACGCGCAGAACAGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000264731.8
ENST00000320472.9
ENST00000354600.10
ENST00000392460.7
ENST00000392461.7
ENST00000392463.6
ENST00000418709.6
ENST00000434928.5
ENST00000437221.5
ENST00000440651.6
ENST00000456148.1
ENST00000460036.1
CDS CAA 72 bp ATCTGTCCCTCGTTGAATTCACGGCTCAGCTCATGGTaGGGGCACCGCTTCACCACCTCCGTGACGTGCTCA +
Preference number: 6 (lower is better)
Translates to: ICPSLNSRLSSW*GHRFTTSVTCS
Trigger: TGAGCACGTCACGGAGGTGGTGAAGCGGTGCCCCAACCATGAGCTGAGCCGTGAATTCAACGAGGGACAGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000264731.8
ENST00000320472.9
ENST00000354600.10
ENST00000392460.7
ENST00000392461.7
ENST00000392463.6
ENST00000418709.6
ENST00000437221.5
ENST00000440651.6
ENST00000449992.5
ENST00000456148.1
ENST00000460036.1
CDS CAA 90 bp GAGCTGCCGGTGGTCCAGGATGCCCTTCCAGATCGCATGTCGAAATaGCTCAGGGATTTTCAGACTTGCCAGATCTGTTGGCTCCCATGC +
Preference number: 6 (lower is better)
Translates to: ELPVVQDALPDRMSK*LRDFQTCQICWLPC
Trigger: GCATGGGAGCCAACAGATCTGGCAAGTCTGAAAATCCCTGAGCAATTTCGACATGCGATCTGGAAGGGCATCCTGGACCACCGGCAGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320472.9
CDS TCA 72 bp TCAGGAATGGTTGTAGGAGTGAGGGCGTTGCGCTGCTaGGGGTTGATAAGCTGGCTCACAGAAGGCAGCTTG +
Preference number: 6 (lower is better)
Translates to: SGMVVGVRALRC*GLISWLTEGSL
Trigger: CAAGCTGCCTTCTGTGAGCCAGCTTATCAACCCTCAGCAGCGCAACGCCCTCACTCCTACAACCATTCCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000264731.8
ENST00000320472.9
ENST00000354600.10
ENST00000392460.7
ENST00000392461.7
ENST00000392463.6
ENST00000440651.6
ENST00000449992.5
ENST00000456148.1
CDS TCA 72 bp GCTCAATCTGATAGATGGTGGTCAGCCCCTGGGTCGTaGAATAGTCCAGACATGATGAACAGCCCAACCTCG +
Preference number: 6 (lower is better)
Translates to: AQSDRWWSAPGS*NSPDMMNSPTS
Trigger: CGAGGTTGGGCTGTTCATCATGTCTGGACTATTTCACGACCCAGGGGCTGACCACCATCTATCAGATTGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264731.8
ENST00000354600.10
ENST00000440651.6
ENST00000449992.5
ENST00000456148.1
CDS CAA 90 bp GAGCTGCCGGTGGTCCAGGATGCCCTTCCAGATCGCATGTCGAAATaGCTCAGGGATTTTCAGACTTGCCAGATCATCCATGGAGTAATG +
Preference number: 6 (lower is better)
Translates to: ELPVVQDALPDRMSK*LRDFQTCQIIHGVM
Trigger: CATTACTCCATGGATGATCTGGCAAGTCTGAAAATCCCTGAGCAATTTCGACATGCGATCTGGAAGGGCATCCTGGACCACCGGCAGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264731.8
ENST00000354600.10
ENST00000440651.6
ENST00000449992.5
ENST00000456148.1
CDS CAA 90 bp TCTTCAGTTCAGTGGAATATTGGGAGGCTGAGAAAGGAGAATCGCTaGAATCCAGAAGGCGGAGGTTGCAGTGAGCTGAGGTCGTGCCAA +
Preference number: 6 (lower is better)
Translates to: SSVQWNIGRLRKENR*NPEGGGCSELRSCQ
Trigger: TTGGCACGACCTCAGCTCACTGCAACCTCCGCCTTCTGGATTCAAGCGATTCTCCTTTCTCAGCCTCCCAATATTCCACTGAACTGAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434928.5
CDS GCA 72 bp AGAAAGGAGAATCGCTTGAATCCAGAAGGCGGAGGTTaGAGTGAGCTGAGGTCGTGCCAAAAATTAGCTGGG +
Preference number: 6 (lower is better)
Translates to: RKENRLNPEGGG*SELRSCQKLAG
Trigger: CCCAGCTAATTTTTGGCACGACCTCAGCTCACTGCAACCTCCGCCTTCTGGATTCAAGCGATTCTCCTTTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000434928.5
CDS CAA 90 bp AAACGGGCGCTTCGTACCATCACCGTTCTTTGTACTGTCCGAAACTaGCTGCTTTCTGATGCTATCTTCATCCGCCTTCCTGTCTCTTCC +
Preference number: 6 (lower is better)
Translates to: KRALRTITVLCTVRN*LLSDAIFIRLPVSS
Trigger: GGAAGAGACAGGAAGGCGGATGAAGATAGCATCAGAAAGCAGCAAGTTTCGGACAGTACAAAGAACGGTGATGGTACGAAGCGCCCGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000264731.8
ENST00000320472.9
ENST00000354600.10
ENST00000392460.7
ENST00000392461.7
ENST00000392463.6
ENST00000418709.6
ENST00000437221.5
ENST00000449992.5
ENST00000460036.1
CDS TCA 72 bp TACTGGGCATGGCTGTTCCCCTCTACTCGAATCAAATaGCTAGGAGGGGCAATCTGTCCCTCGTTGAATTCA +
Preference number: 6 (lower is better)
Translates to: YWAWLFPSTRIK*LGGAICPSLNS
Trigger: TGAATTCAACGAGGGACAGATTGCCCCTCCTAGTCATTTGATTCGAGTAGAGGGGAACAGCCATGCCCAGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000264731.8
ENST00000320472.9
ENST00000354600.10
ENST00000392460.7
ENST00000392461.7
ENST00000392463.6
ENST00000418709.6
ENST00000437221.5
ENST00000440651.6
ENST00000449992.5
ENST00000456148.1
ENST00000460036.1
CDS TCA 72 bp TGCTGTTGCTGTTGCCTGTACGTTTCAATTGTGTGCTaGGGAAGGTACTGCATGAGTTCCAGGGACTCTTTG +
Preference number: 6 (lower is better)
Translates to: CCCCCLYVSIVC*GRYCMSSRDSL
Trigger: CAAAGAGTCCCTGGAACTCATGCAGTACCTTCCTCAGCACACAATTGAAACGTACAGGCAACAGCAACAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000264731.8
ENST00000320472.9
ENST00000354600.10
ENST00000392460.7
ENST00000392461.7
ENST00000392463.6
ENST00000418709.6
ENST00000437221.5
ENST00000440651.6
ENST00000449992.5
ENST00000456148.1
ENST00000460036.1
CDS GCA 72 bp CGAAACGCATCACCGTTCTTTGTACTGTCCGAAACTTaGTGCTTTCTGATGCTATCTTCATCCGCCTTCCTG +
Preference number: 6 (lower is better)
Translates to: RNASPFFVLSET*CFLMLSSSAFL
Trigger: CAGGAAGGCGGATGAAGATAGCATCAGAAAGCAGCAAGTTTCGGACAGTACAAAGAACGGTGATGCGTTTCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440651.6
ENST00000456148.1
CDS CAA 90 bp TGTGTTCTGACGAAACGCATCACCGTTCTTTGTACTGTCCGAAACTaGCTGCTTTCTGATGCTATCTTCATCCGCCTTCCTGTCTCTTCC +
Preference number: 6 (lower is better)
Translates to: CVLTKRITVLCTVRN*LLSDAIFIRLPVSS
Trigger: GGAAGAGACAGGAAGGCGGATGAAGATAGCATCAGAAAGCAGCAAGTTTCGGACAGTACAAAGAACGGTGATGCGTTTCGTCAGAACACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440651.6
ENST00000456148.1
CDS CAA 90 bp AGGTCCGAGTCCTGCATGCGGATACAGTCCATGCTAATCTCAATCTaGTTTGTCGCACCATCTTCTGATGGTTCATCCACAAAGTTCAAG +
Preference number: 6 (lower is better)
Translates to: RSESCMRIQSMLISI*FVAPSSDGSSTKFK
Trigger: CTTGAACTTTGTGGATGAACCATCAGAAGATGGTGCGACAAACAAGATTGAGATTAGCATGGACTGTATCCGCATGCAGGACTCGGACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000264731.8
ENST00000320472.9
ENST00000392460.7
ENST00000418709.6
ENST00000440651.6
ENST00000486398.1
CDS GCA 72 bp GTACCATCACCGTTCTTTGTACTGTCCGAAACTTGCTaGTTTCTGATGCTATCTTCATCCGCCTTCCTGTCT +
Preference number: 6 (lower is better)
Translates to: VPSPFFVLSETC*FLMLSSSAFLS
Trigger: AGACAGGAAGGCGGATGAAGATAGCATCAGAAAGCAGCAAGTTTCGGACAGTACAAAGAACGGTGATGGTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000264731.8
ENST00000320472.9
ENST00000354600.10
ENST00000392460.7
ENST00000392461.7
ENST00000392463.6
ENST00000418709.6
ENST00000437221.5
ENST00000449992.5
ENST00000460036.1
CDS GCA 72 bp TTCGTACCATCACCGTTCTTTGTACTGTCCGAAACTTaGTGCTTTCTGATGCTATCTTCATCCGCCTTCCTG +
Preference number: 6 (lower is better)
Translates to: FVPSPFFVLSET*CFLMLSSSAFL
Trigger: CAGGAAGGCGGATGAAGATAGCATCAGAAAGCAGCAAGTTTCGGACAGTACAAAGAACGGTGATGGTACGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000264731.8
ENST00000320472.9
ENST00000354600.10
ENST00000392460.7
ENST00000392461.7
ENST00000392463.6
ENST00000418709.6
ENST00000437221.5
ENST00000449992.5
ENST00000460036.1
CDS GCA 72 bp AACGCATCACCGTTCTTTGTACTGTCCGAAACTTGCTaGTTTCTGATGCTATCTTCATCCGCCTTCCTGTCT +
Preference number: 6 (lower is better)
Translates to: NASPFFVLSETC*FLMLSSSAFLS
Trigger: AGACAGGAAGGCGGATGAAGATAGCATCAGAAAGCAGCAAGTTTCGGACAGTACAAAGAACGGTGATGCGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440651.6
ENST00000456148.1
CDS CAA 72 bp CTTCGTACCATCACCGTTCTTTGTACTGTCCGAAACTaGCTGCTTTCTGATGCTATCTTCATCCGCCTTCCT +
Preference number: 6 (lower is better)
Translates to: LRTITVLCTVRN*LLSDAIFIRLP
Trigger: AGGAAGGCGGATGAAGATAGCATCAGAAAGCAGCAAGTTTCGGACAGTACAAAGAACGGTGATGGTACGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000264731.8
ENST00000320472.9
ENST00000354600.10
ENST00000392460.7
ENST00000392461.7
ENST00000392463.6
ENST00000418709.6
ENST00000437221.5
ENST00000449992.5
ENST00000460036.1
CDS CAA 72 bp GTGGGGAGCTGTTACCATATGAAGATGGAGACTGTATaGAGGTCTGTTTCTGAAGTAAGTGCTGGTGCTGCT +
Preference number: 6 (lower is better)
Translates to: VGSCYHMKMETV*RSVSEVSAGAA
Trigger: AGCAGCACCAGCACTTACTTCAGAAACAGACCTCAATACAGTCTCCATCTTCATATGGTAACAGCTCCCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000264731.8
ENST00000320472.9
ENST00000354600.10
ENST00000392460.7
ENST00000392461.7
ENST00000392463.6
ENST00000440651.6
ENST00000449992.5
ENST00000456148.1
CDS CAA 72 bp ACGAAACGCATCACCGTTCTTTGTACTGTCCGAAACTaGCTGCTTTCTGATGCTATCTTCATCCGCCTTCCT +
Preference number: 6 (lower is better)
Translates to: TKRITVLCTVRN*LLSDAIFIRLP
Trigger: AGGAAGGCGGATGAAGATAGCATCAGAAAGCAGCAAGTTTCGGACAGTACAAAGAACGGTGATGCGTTTCGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440651.6
ENST00000456148.1
CDS CCA 72 bp GGATCGGTAATAACTTTCTTTCCAAGAGAAATGAGCTaGGGTTTCTACGAAACGCTGGATGTAAGGGTCAGG +
Preference number: 6 (lower is better)
Translates to: GSVITFFPREMS*GFYETLDVRVR
Trigger: CCTGACCCTTACATCCAGCGTTTCGTAGAAACCCCAGCTCATTTCTCTTGGAAAGAAAGTTATTACCGATCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000264731.8
ENST00000320472.9
ENST00000392460.7
ENST00000418709.6
ENST00000440651.6
ENST00000486398.1
CDS CAA 72 bp TCCTGCATGCGGATACAGTCCATGCTAATCTCAATCTaGTTTGTCGCACCATCTTCTGATGGTTCATCCACA +
Preference number: 6 (lower is better)
Translates to: SCMRIQSMLISI*FVAPSSDGSST
Trigger: TGTGGATGAACCATCAGAAGATGGTGCGACAAACAAGATTGAGATTAGCATGGACTGTATCCGCATGCAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000264731.8
ENST00000320472.9
ENST00000392460.7
ENST00000418709.6
ENST00000440651.6
ENST00000486398.1
CDS CAA 72 bp ATAGGGCTCTATGGGTACACTGATCGGTTTGGGGGCTaGGAATGTCTAAAGAAGACGTCAGATTGTTTTGGA +
Preference number: 6 (lower is better)
Translates to: IGLYGYTDRFGG*ECLKKTSDCFG
Trigger: TCCAAAACAATCTGACGTCTTCTTTAGACATTCCAAGCCCCCAAACCGATCAGTGTACCCATAGAGCCCTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000418709.6
ENST00000437221.5
CDS GCA 72 bp CAGGTACAACATGTTAGCTGTAAGATTGATCAATGCTaGTGTCCTTTCTTCTGGCTCCAGGATTTTGCCAAC +
Preference number: 6 (lower is better)
Translates to: QVQHVSCKIDQC*CPFFWLQDFAN
Trigger: GTTGGCAAAATCCTGGAGCCAGAAGAAAGGACAGCAGCATTGATCAATCTTACAGCTAACATGTTGTACCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354600.10
ENST00000434928.5
ENST00000460036.1
CDS GCA 72 bp TTCCAGGTACAACATGTTAGCTGTAAGATTGATCAATaGTGCTGTCCTTTCTTCTGGCTCCAGGATTTTGCC +
Preference number: 6 (lower is better)
Translates to: FQVQHVSCKIDQ*CCPFFWLQDFA
Trigger: GGCAAAATCCTGGAGCCAGAAGAAAGGACAGCAGCATTGATCAATCTTACAGCTAACATGTTGTACCTGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354600.10
ENST00000434928.5
ENST00000460036.1
CDS CAA 72 bp GCATTGTTTTCCAGGTACAACATGTTAGCTGTAAGATaGATCAATGCTGCTGTCCTTTCTTCTGGCTCCAGG +
Preference number: 6 (lower is better)
Translates to: ALFSRYNMLAVR*INAAVLSSGSR
Trigger: CCTGGAGCCAGAAGAAAGGACAGCAGCATTGATCAATCTTACAGCTAACATGTTGTACCTGGAAAACAATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354600.10
ENST00000434928.5
ENST00000460036.1
CDS CAA 90 bp AATATAGAGATAGGGCTCTATGGGTACACTGATCGGTTTGGGGGCTaGGAATGTCTAAAGAAGACGTCAGATTGTTTTGGAGTTTCTCTC +
Preference number: 6 (lower is better)
Translates to: NIEIGLYGYTDRFGG*ECLKKTSDCFGVSL
Trigger: GAGAGAAACTCCAAAACAATCTGACGTCTTCTTTAGACATTCCAAGCCCCCAAACCGATCAGTGTACCCATAGAGCCCTATCTCTATATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000418709.6
ENST00000437221.5
CDS TCA 72 bp CACTTAAAATATAGAGATAGGGCTCTATGGGTACACTaGTCGGTTTGGGGGCTTGGAATGTCTAAAGAAGAC +
Preference number: 6 (lower is better)
Translates to: HLKYRDRALWVH*SVWGLGMSKED
Trigger: GTCTTCTTTAGACATTCCAAGCCCCCAAACCGATCAGTGTACCCATAGAGCCCTATCTCTATATTTTAAGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000418709.6
ENST00000437221.5
CDS TCA 72 bp GTTGCAACTGAAAGAGGGTTGCCATACCAGGTCATCTaGATCTATGACAATCTGCTATCTCCCATTATGTTC +
Preference number: 6 (lower is better)
Translates to: VATERGLPYQVI*IYDNLLSPIMF
Trigger: GAACATAATGGGAGATAGCAGATTGTCATAGATTCAGATGACCTGGTATGGCAACCCTCTTTCAGTTGCAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460036.1
CDS CAA 90 bp TCTGCTATCTCCCATTATGTTCCACATTGCTCATCAATCACCCTATaGCTGATCCAAATAAAGTCACCCTCACTCATGCCTCCTAAAATG +
Preference number: 6 (lower is better)
Translates to: SAISHYVPHCSSITL*LIQIKSPSLMPPKM
Trigger: CATTTTAGGAGGCATGAGTGAGGGTGACTTTATTTGGATCAGCAATAGGGTGATTGATGAGCAATGTGGAACATAATGGGAGATAGCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460036.1
CDS TCA 72 bp TGGTTCATCCACAAAGTTCAAGTCAATGGGCTGAACTaGACATATAGGCTGTTCCAGAAAATCCCAGATATG +
Preference number: 6 (lower is better)
Translates to: WFIHKVQVNGLN*TYRLFQKIPDM
Trigger: CATATCTGGGATTTTCTGGAACAGCCTATATGTTCAGTTCAGCCCATTGACTTGAACTTTGTGGATGAACCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000264731.8
ENST00000320472.9
ENST00000392460.7
ENST00000418709.6
ENST00000440651.6
ENST00000486398.1
CDS GCA 72 bp ACTGAACATATAGGCTGTTCCAGAAAATCCCAGATATaGTGGAAAACCTCTGGACTGAGGAATTCATTTGTC +
Preference number: 6 (lower is better)
Translates to: TEHIGCSRKSQI*WKTSGLRNSFV
Trigger: GACAAATGAATTCCTCAGTCCAGAGGTTTTCCAGCATATCTGGGATTTTCTGGAACAGCCTATATGTTCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000264731.8
ENST00000320472.9
ENST00000392460.7
ENST00000418709.6
ENST00000440651.6
ENST00000486398.1
CDS GCA 72 bp GGTTGCCATACCAGGTCATCTGAATCTATGACAATCTaGTATCTCCCATTATGTTCCACATTGCTCATCAAT +
Preference number: 6 (lower is better)
Translates to: GCHTRSSESMTI*YLPLCSTLLIN
Trigger: ATTGATGAGCAATGTGGAACATAATGGGAGATAGCAGATTGTCATAGATTCAGATGACCTGGTATGGCAACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460036.1
CDS GCA 72 bp TCTAAAATACGGCAACATGATGCTACCTTATCCTTCTaGACCCAGATATTTCCCCAATTATCATGCACTAGG +
Preference number: 6 (lower is better)
Translates to: SKIRQHDATLSF*TQIFPQLSCTR
Trigger: CCTAGTGCATGATAATTGGGGAAATATCTGGGTGCAGAAGGATAAGGTAGCATCATGTTGCCGTATTTTAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460036.1
CDS CCA 72 bp GAACATATAGGCTGTTCCAGAAAATCCCAGATATGCTaGAAAACCTCTGGACTGAGGAATTCATTTGTCTGT +
Preference number: 6 (lower is better)
Translates to: EHIGCSRKSQIC*KTSGLRNSFVC
Trigger: ACAGACAAATGAATTCCTCAGTCCAGAGGTTTTCCAGCATATCTGGGATTTTCTGGAACAGCCTATATGTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000264731.8
ENST00000320472.9
ENST00000392460.7
ENST00000418709.6
ENST00000440651.6
ENST00000486398.1
CDS CAA 90 bp TCATCTGAATCTATGACAATCTGCTATCTCCCATTATGTTCCACATaGCTCATCAATCACCCTATTGCTGATCCAAATAAAGTCACCCTC +
Preference number: 6 (lower is better)
Translates to: SSESMTICYLPLCST*LINHPIADPNKVTL
Trigger: GAGGGTGACTTTATTTGGATCAGCAATAGGGTGATTGATGAGCAATGTGGAACATAATGGGAGATAGCAGATTGTCATAGATTCAGATGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460036.1
CDS GCA 72 bp TTATCCTTCTGCACCCAGATATTTCCCCAATTATCATaGACTAGGTCTCAGAATTCTTCTCATTACAGCATT +
Preference number: 6 (lower is better)
Translates to: LSFCTQIFPQLS*TRSQNSSHYSI
Trigger: AATGCTGTAATGAGAAGAATTCTGAGACCTAGTGCATGATAATTGGGGAAATATCTGGGTGCAGAAGGATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460036.1
CDS CAA 72 bp TCTATGACAATCTGCTATCTCCCATTATGTTCCACATaGCTCATCAATCACCCTATTGCTGATCCAAATAAA +
Preference number: 6 (lower is better)
Translates to: SMTICYLPLCST*LINHPIADPNK
Trigger: TTTATTTGGATCAGCAATAGGGTGATTGATGAGCAATGTGGAACATAATGGGAGATAGCAGATTGTCATAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460036.1