Pregenerated sensors for TP53TG1 (Homo sapiens)
Ensembl gene IDs: ENSG00000182165Ensembl transcript IDs: ENST00000359941.10, ENST00000416560.6, ENST00000421293.2, ENST00000432193.6, ENST00000542586.2, ENST00000610086.1, ENST00000616845.1, ENST00000653182.1, ENST00000654969.1, ENST00000661943.1
Found 65 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | CCCAGGCCCGCAGCCCAGAATAGAGCCGGGGCCCAAGACGCCCACTaGAGACAGGGTCGGGTCCCACTACCGCGCAGGCCCGGCTCGCCC | + |
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Preference number: 5 (lower is better) Translates to: PRPAAQNRAGAQDAH*RQGRVPLPRRPGSP Trigger: GGGCGAGCCGGGCCTGCGCGGTAGTGGGACCCGACCCTGTCTCCAGTGGGCGTCTTGGGCCCCGGCTCTATTCTGGGCTGCGGGCCTGGG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000421293.2 ENST00000661943.1 |
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| CDS CCA 90 bp | CCTTCGTGGGCGGAGCGCGGCCTGCCCAGAGTGCCTTCTAGATCCTaGGTCAGGCGCCAAGCTCCCCAGCATCATGCAGGAAGCTGCAGC | + |
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Preference number: 5 (lower is better) Translates to: PSWAERGLPRVPSRS*VRRQAPQHHAGSCS Trigger: GCTGCAGCTTCCTGCATGATGCTGGGGAGCTTGGCGCCTGACCCAGGATCTAGAAGGCACTCTGGGCAGGCCGCGCTCCGCCCACGAAGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENST00000359941.10 ENST00000416560.6 ENST00000421293.2 ENST00000432193.6 ENST00000542586.2 ENST00000610086.1 ENST00000616845.1 ENST00000653182.1 ENST00000654969.1 ENST00000661943.1 |
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| CDS GCA 90 bp | CAGAGGGTTGGGTACCTTCGTGGGCGGAGCGCGGCCTGCCCAGAGTaGCTTCTAGATCCTGGGTCAGGCGCCAAGCTCCCCAGCATCATG | + |
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Preference number: 5 (lower is better) Translates to: QRVGYLRGRSAACPE*LLDPGSGAKLPSIM Trigger: CATGATGCTGGGGAGCTTGGCGCCTGACCCAGGATCTAGAAGGCACTCTGGGCAGGCCGCGCTCCGCCCACGAAGGTACCCAACCCTCTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000359941.10 ENST00000432193.6 ENST00000610086.1 ENST00000616845.1 ENST00000653182.1 ENST00000654969.1 ENST00000661943.1 |
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| CDS GCA 90 bp | CATCTATCCCAGAGGGTTGGGTACCTTCGTGGGCGGAGCGCGGCCTaGCCAGAGTGCCTTCTAGATCCTGGGTCAGGCGCCAAGCTCCCC | + |
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Preference number: 5 (lower is better) Translates to: HLSQRVGYLRGRSAA*PECLLDPGSGAKLP Trigger: GGGGAGCTTGGCGCCTGACCCAGGATCTAGAAGGCACTCTGGGCAGGCCGCGCTCCGCCCACGAAGGTACCCAACCCTCTGGGATAGATG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000359941.10 ENST00000432193.6 ENST00000610086.1 ENST00000616845.1 ENST00000653182.1 ENST00000654969.1 ENST00000661943.1 |
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| CDS GCA 90 bp | TGTGGTAAGCCAGACCTTCGTGGGCGGAGCGCGGCCTGCCCAGAGTaGCTTCTAGATCCTGGGTCAGGCGCCAAGCTCCCCAGCATCATG | + |
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Preference number: 5 (lower is better) Translates to: CGKPDLRGRSAACPE*LLDPGSGAKLPSIM Trigger: CATGATGCTGGGGAGCTTGGCGCCTGACCCAGGATCTAGAAGGCACTCTGGGCAGGCCGCGCTCCGCCCACGAAGGTCTGGCTTACCACA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000416560.6 ENST00000542586.2 |
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| CDS GCA 90 bp | CCTTGGTGGTTAAACCTTCGTGGGCGGAGCGCGGCCTGCCCAGAGTaGCTTCTAGATCCTGGGTCAGGCGCCAAGCTCCCCAGCATCATG | + |
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Preference number: 5 (lower is better) Translates to: PWWLNLRGRSAACPE*LLDPGSGAKLPSIM Trigger: CATGATGCTGGGGAGCTTGGCGCCTGACCCAGGATCTAGAAGGCACTCTGGGCAGGCCGCGCTCCGCCCACGAAGGTTTAACCACCAAGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000421293.2 |
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| CDS CCA 90 bp | GGTGTAAGTGTTCGCCTGGTGCTGCAAAAAGCGGCTCACTGGGAATaGGGAGGAGCGTGTGGTAAGCCAGACCTTCGTGGGCGGAGCGCG | + |
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Preference number: 5 (lower is better) Translates to: GVSVRLVLQKAAHWE*GGACGKPDLRGRSA Trigger: CGCGCTCCGCCCACGAAGGTCTGGCTTACCACACGCTCCTCCCCATTCCCAGTGAGCCGCTTTTTGCAGCACCAGGCGAACACTTACACC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000416560.6 ENST00000542586.2 |
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| CDS CCA 90 bp | GGTGTAAGTGTTCGCCTGGTGCTGCAAAAAGCGGCTCACTGGGAATaGGGAGGAGCGTGTGGTAAGCCAGACCTGCGGCGAGAAGTTGGG | + |
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Preference number: 5 (lower is better) Translates to: GVSVRLVLQKAAHWE*GGACGKPDLRREVG Trigger: CCCAACTTCTCGCCGCAGGTCTGGCTTACCACACGCTCCTCCCCATTCCCAGTGAGCCGCTTTTTGCAGCACCAGGCGAACACTTACACC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENST00000359941.10 ENST00000610086.1 ENST00000653182.1 ENST00000654969.1 ENST00000661943.1 |
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| CDS CCA 90 bp | AGCACTGGTGTAAGTGTTCGCCTGGTGCTGCAAAAAGCGGCTCACTaGGAATGGGGAGGAGCGTGTGGTAAGCCAGACCTTCGTGGGCGG | + |
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Preference number: 5 (lower is better) Translates to: STGVSVRLVLQKAAH*EWGGACGKPDLRGR Trigger: CCGCCCACGAAGGTCTGGCTTACCACACGCTCCTCCCCATTCCCAGTGAGCCGCTTTTTGCAGCACCAGGCGAACACTTACACCAGTGCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000416560.6 ENST00000542586.2 |
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| CDS CCA 90 bp | AGCACTGGTGTAAGTGTTCGCCTGGTGCTGCAAAAAGCGGCTCACTaGGAATGGGGAGGAGCGTGTGGTAAGCCAGACCTGCGGCGAGAA | + |
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Preference number: 5 (lower is better) Translates to: STGVSVRLVLQKAAH*EWGGACGKPDLRRE Trigger: TTCTCGCCGCAGGTCTGGCTTACCACACGCTCCTCCCCATTCCCAGTGAGCCGCTTTTTGCAGCACCAGGCGAACACTTACACCAGTGCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENST00000359941.10 ENST00000610086.1 ENST00000653182.1 ENST00000654969.1 ENST00000661943.1 |
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| CDS TCA 90 bp | TGGGGAGGAGCGTGTGGTAAGCCAGACCTGCGGCGAGAAGTTGGGTaGAAATGGGTCTTAACCATCGCTTCCTGCATCTATCCCAGAGGG | + |
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Preference number: 5 (lower is better) Translates to: WGGACGKPDLRREVG*KWVLTIASCIYPRG Trigger: CCCTCTGGGATAGATGCAGGAAGCGATGGTTAAGACCCATTTTCACCCAACTTCTCGCCGCAGGTCTGGCTTACCACACGCTCCTCCCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000359941.10 ENST00000610086.1 ENST00000653182.1 ENST00000654969.1 ENST00000661943.1 |
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| CDS GCA 90 bp | CTCATGGGATTTCTGCCCTGCAGGAGACAATGCCACACTGAACTCTaGTTGGAGATACCTTGTGAAGCTCACTGGGAGTTTCTGAGAGCT | + |
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Preference number: 5 (lower is better) Translates to: LMGFLPCRRQCHTEL*LEIPCEAHWEFLRA Trigger: AGCTCTCAGAAACTCCCAGTGAGCTTCACAAGGTATCTCCAAGCAGAGTTCAGTGTGGCATTGTCTCCTGCAGGGCAGAAATCCCATGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000654969.1 |
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| CDS CCA 90 bp | TGTCTGGACAAGTCACCTGTGAAGCCTTTCTTATCTGTGTGGCTGTaGCCATGTCTTAGGCAAGCCGCCCTGTGCAAGTTCCCTTATATG | + |
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Preference number: 5 (lower is better) Translates to: CLDKSPVKPFLSVWL*PCLRQAALCKFPYM Trigger: CATATAAGGGAACTTGCACAGGGCGGCTTGCCTAAGACATGGCCACAGCCACACAGATAAGAAAGGCTTCACAGGTGACTTGTCCAGACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000661943.1 |
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| CDS CCA 90 bp | AAGCTGAGCCCAGCCATGGGTTTGTACCCTCAAATACCTATGAGTTaGGTGAATTCCTCTCTCCTTGAGGTCCTAAGAACATGGTGTTCC | + |
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Preference number: 5 (lower is better) Translates to: KLSPAMGLYPQIPMS*VNSSLLEVLRTWCS Trigger: GGAACACCATGTTCTTAGGACCTCAAGGAGAGAGGAATTCACCCAACTCATAGGTATTTGAGGGTACAAACCCATGGCTGGGCTCAGCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000661943.1 |
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| CDS TCA 90 bp | GAGGTCATAATGGTTGTGAAAAAGACAGGCAGTGGAAACGATCTTTaGGGAAACAGGTTGTGTAGTTGGCCTGGGTTGCTAGTGAAGGGC | + |
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Preference number: 5 (lower is better) Translates to: EVIMVVKKTGSGNDL*GNRLCSWPGLLVKG Trigger: GCCCTTCACTAGCAACCCAGGCCAACTACACAACCTGTTTCCTCAAAGATCGTTTCCACTGCCTGTCTTTTTCACAACCATTATGACCTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000654969.1 |
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| CDS CCA 90 bp | GTGGACTGTAAATCACACACTTGTCATGACTACTCCACTTTCTCATaGGATTTCTGCCCTGCAGGAGACAATGCCACACTGAACTCTGCT | + |
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Preference number: 5 (lower is better) Translates to: VDCKSHTCHDYSTFS*DFCPAGDNATLNSA Trigger: AGCAGAGTTCAGTGTGGCATTGTCTCCTGCAGGGCAGAAATCCCATGAGAAAGTGGAGTAGTCATGACAAGTGTGTGATTTACAGTCCAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000654969.1 |
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| CDS TCA 90 bp | TTCTTCTCCCTGGCAGTTTATCTGCCTCTAATTCCTGCGGTTTCATaGGGAAAATGGAGGTTTCTCCCAAAATGGAACCTGTGGTGCCTT | + |
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Preference number: 5 (lower is better) Translates to: FFSLAVYLPLIPAVS*GKWRFLPKWNLWCL Trigger: AAGGCACCACAGGTTCCATTTTGGGAGAAACCTCCATTTTCCTCATGAAACCGCAGGAATTAGAGGCAGATAAACTGCCAGGGAGAAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000653182.1 |
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| CDS GCA 90 bp | AAATCACACACTTGTCATGACTACTCCACTTTCTCATGGGATTTCTaGCCTGCAGGAGACAATGCCACACTGAACTCTGCTTGGAGATAC | + |
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Preference number: 5 (lower is better) Translates to: KSHTCHDYSTFSWDF*PAGDNATLNSAWRY Trigger: GTATCTCCAAGCAGAGTTCAGTGTGGCATTGTCTCCTGCAGGGCAGAAATCCCATGAGAAAGTGGAGTAGTCATGACAAGTGTGTGATTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000654969.1 |
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| CDS GCA 90 bp | TGGCCATGTCTTAGGCAAGCCGCCCTGTGCAAGTTCCCTTATATGTaGCTTCAGGCTGTTCTTTTGTTTGAAAGAATTCAACCAATGACC | + |
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Preference number: 5 (lower is better) Translates to: WPCLRQAALCKFPYM*LQAVLLFERIQPMT Trigger: GGTCATTGGTTGAATTCTTTCAAACAAAAGAACAGCCTGAAGGCACATATAAGGGAACTTGCACAGGGCGGCTTGCCTAAGACATGGCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000661943.1 |
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| CDS CCA 90 bp | CGGTGGAACCCACTTTGTTTTCTAAGGAATCCTACAAGTTTCCTGTaGTGGACTGTAAATCACACACTTGTCATGACTACTCCACTTTCT | + |
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Preference number: 5 (lower is better) Translates to: RWNPLCFLRNPTSFL*WTVNHTLVMTTPLS Trigger: AGAAAGTGGAGTAGTCATGACAAGTGTGTGATTTACAGTCCACCACAGGAAACTTGTAGGATTCCTTAGAAAACAAAGTGGGTTCCACCG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000654969.1 |
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| CDS GCA 90 bp | AAGGAGTCCCAGGCCATCAGAAATTATCTTAGGGCCTCTCATGCATaGATTAAGAGTGGCAAAACAAAGTGGAGAAAAAGAATTCAGTTG | + |
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Preference number: 5 (lower is better) Translates to: KESQAIRNYLRASHA*IKSGKTKWRKRIQL Trigger: CAACTGAATTCTTTTTCTCCACTTTGTTTTGCCACTCTTAATGCATGCATGAGAGGCCCTAAGATAATTTCTGATGGCCTGGGACTCCTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000653182.1 |
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| CDS CCA 90 bp | TGGAACCCACTTTGTTTTCTAAGGAATCCTACAAGTTTCCTGTGGTaGACTGTAAATCACACACTTGTCATGACTACTCCACTTTCTCAT | + |
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Preference number: 5 (lower is better) Translates to: WNPLCFLRNPTSFLW*TVNHTLVMTTPLSH Trigger: ATGAGAAAGTGGAGTAGTCATGACAAGTGTGTGATTTACAGTCCACCACAGGAAACTTGTAGGATTCCTTAGAAAACAAAGTGGGTTCCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000654969.1 |
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| CDS GCA 90 bp | TCTAAGGATTCCTGGAAGAAAGGCATATCCATGTATTGTTTCATTTaGATTACCATTTGGAGTTTGATAGTCTTTAGGCAAGAAGAAACA | + |
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Preference number: 5 (lower is better) Translates to: SKDSWKKGISMYCFI*ITIWSLIVFRQEET Trigger: TGTTTCTTCTTGCCTAAAGACTATCAAACTCCAAATGGTAATGCAAATGAAACAATACATGGATATGCCTTTCTTCCAGGAATCCTTAGA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000661943.1 |
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| CDS CCA 72 bp | GCAGCCCAGAATAGAGCCGGGGCCCAAGACGCCCACTaGAGACAGGGTCGGGTCCCACTACCGCGCAGGCCC | + |
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Preference number: 6 (lower is better) Translates to: AAQNRAGAQDAH*RQGRVPLPRRP Trigger: GGGCCTGCGCGGTAGTGGGACCCGACCCTGTCTCCAGTGGGCGTCTTGGGCCCCGGCTCTATTCTGGGCTGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000421293.2 ENST00000661943.1 |
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| CDS GCA 72 bp | GGGTACCTTCGTGGGCGGAGCGCGGCCTGCCCAGAGTaGCTTCTAGATCCTGGGTCAGGCGCCAAGCTCCCC | + |
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Preference number: 6 (lower is better) Translates to: GYLRGRSAACPE*LLDPGSGAKLP Trigger: GGGGAGCTTGGCGCCTGACCCAGGATCTAGAAGGCACTCTGGGCAGGCCGCGCTCCGCCCACGAAGGTACCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000359941.10 ENST00000432193.6 ENST00000610086.1 ENST00000616845.1 ENST00000653182.1 ENST00000654969.1 ENST00000661943.1 |
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| CDS GCA 72 bp | CCAGACCTTCGTGGGCGGAGCGCGGCCTGCCCAGAGTaGCTTCTAGATCCTGGGTCAGGCGCCAAGCTCCCC | + |
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Preference number: 6 (lower is better) Translates to: PDLRGRSAACPE*LLDPGSGAKLP Trigger: GGGGAGCTTGGCGCCTGACCCAGGATCTAGAAGGCACTCTGGGCAGGCCGCGCTCCGCCCACGAAGGTCTGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000416560.6 ENST00000542586.2 |
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| CDS GCA 72 bp | CAGAGGGTTGGGTACCTTCGTGGGCGGAGCGCGGCCTaGCCAGAGTGCCTTCTAGATCCTGGGTCAGGCGCC | + |
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Preference number: 6 (lower is better) Translates to: QRVGYLRGRSAA*PECLLDPGSGA Trigger: GGCGCCTGACCCAGGATCTAGAAGGCACTCTGGGCAGGCCGCGCTCCGCCCACGAAGGTACCCAACCCTCTG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000359941.10 ENST00000432193.6 ENST00000610086.1 ENST00000616845.1 ENST00000653182.1 ENST00000654969.1 ENST00000661943.1 |
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| CDS CCA 72 bp | GGAAGCTGCAGCCCCGCAGAGTTAGGACAGCTCATTTaGCACCCGGCGAGCCCTTCCCAGGCCCGCAGCCCA | + |
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Preference number: 6 (lower is better) Translates to: GSCSPAELGQLI*HPASPSQARSP Trigger: TGGGCTGCGGGCCTGGGAAGGGCTCGCCGGGTGCCAAATGAGCTGTCCTAACTCTGCGGGGCTGCAGCTTCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENST00000416560.6 ENST00000421293.2 ENST00000432193.6 ENST00000542586.2 ENST00000610086.1 ENST00000616845.1 ENST00000653182.1 ENST00000654969.1 ENST00000661943.1 |
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| CDS GCA 72 bp | TGTGGTAAGCCAGACCTTCGTGGGCGGAGCGCGGCCTaGCCAGAGTGCCTTCTAGATCCTGGGTCAGGCGCC | + |
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Preference number: 6 (lower is better) Translates to: CGKPDLRGRSAA*PECLLDPGSGA Trigger: GGCGCCTGACCCAGGATCTAGAAGGCACTCTGGGCAGGCCGCGCTCCGCCCACGAAGGTCTGGCTTACCACA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000416560.6 ENST00000542586.2 |
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| CDS CCA 72 bp | GCGGAGCGCGGCCTGCCCAGAGTGCCTTCTAGATCCTaGGTCAGGCGCCAAGCTCCCCAGCATCATGCAGGA | + |
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Preference number: 6 (lower is better) Translates to: AERGLPRVPSRS*VRRQAPQHHAG Trigger: TCCTGCATGATGCTGGGGAGCTTGGCGCCTGACCCAGGATCTAGAAGGCACTCTGGGCAGGCCGCGCTCCGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENST00000359941.10 ENST00000416560.6 ENST00000421293.2 ENST00000432193.6 ENST00000542586.2 ENST00000610086.1 ENST00000616845.1 ENST00000653182.1 ENST00000654969.1 ENST00000661943.1 |
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| CDS GCA 72 bp | TTAAACCTTCGTGGGCGGAGCGCGGCCTGCCCAGAGTaGCTTCTAGATCCTGGGTCAGGCGCCAAGCTCCCC | + |
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Preference number: 6 (lower is better) Translates to: LNLRGRSAACPE*LLDPGSGAKLP Trigger: GGGGAGCTTGGCGCCTGACCCAGGATCTAGAAGGCACTCTGGGCAGGCCGCGCTCCGCCCACGAAGGTTTAA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000421293.2 |
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| CDS GCA 72 bp | CCTTGGTGGTTAAACCTTCGTGGGCGGAGCGCGGCCTaGCCAGAGTGCCTTCTAGATCCTGGGTCAGGCGCC | + |
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Preference number: 6 (lower is better) Translates to: PWWLNLRGRSAA*PECLLDPGSGA Trigger: GGCGCCTGACCCAGGATCTAGAAGGCACTCTGGGCAGGCCGCGCTCCGCCCACGAAGGTTTAACCACCAAGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000421293.2 |
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| CDS CAA 90 bp | GCATCATGCAGGAAGCTGCAGCCCCGCAGAGTTAGGACAGCTCATTaGGCACCCGGCGAGCCCTTCCCAGGCCCGCAGCCCAGAATAGAG | + |
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Preference number: 6 (lower is better) Translates to: ASCRKLQPRRVRTAH*APGEPFPGPQPRIE Trigger: CTCTATTCTGGGCTGCGGGCCTGGGAAGGGCTCGCCGGGTGCCAAATGAGCTGTCCTAACTCTGCGGGGCTGCAGCTTCCTGCATGATGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENST00000416560.6 ENST00000421293.2 ENST00000432193.6 ENST00000542586.2 ENST00000610086.1 ENST00000616845.1 ENST00000653182.1 ENST00000654969.1 ENST00000661943.1 |
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| CDS GCA 72 bp | GGGCGTCTCACTGGATCAGAAGTGCAGCAGACACCCTaGTGGATCCAGAGGGGTGGAAGTCAGCGGCTAGCC | + |
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Preference number: 6 (lower is better) Translates to: GRLTGSEVQQTP*WIQRGGSQRLA Trigger: GGCTAGCCGCTGACTTCCACCCCTCTGGATCCAGCAGGGTGTCTGCTGCACTTCTGATCCAGTGAGACGCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000359941.10 |
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| CDS CCA 72 bp | CTTCCTGCATCTATCCCAGAGGGTTGGGTACCTTCGTaGGCGGAGCGCGGCCTGCCCAGAGTGCCTTCTAGA | + |
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Preference number: 6 (lower is better) Translates to: LPASIPEGWVPS*AERGLPRVPSR Trigger: TCTAGAAGGCACTCTGGGCAGGCCGCGCTCCGCCCACGAAGGTACCCAACCCTCTGGGATAGATGCAGGAAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000359941.10 ENST00000432193.6 ENST00000610086.1 ENST00000616845.1 ENST00000653182.1 ENST00000654969.1 ENST00000661943.1 |
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| CDS CCA 72 bp | GTTCGCCTGGTGCTGCAAAAAGCGGCTCACTGGGAATaGGGAGGAGCGTGTGGTAAGCCAGACCTGCGGCGA | + |
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Preference number: 6 (lower is better) Translates to: VRLVLQKAAHWE*GGACGKPDLRR Trigger: TCGCCGCAGGTCTGGCTTACCACACGCTCCTCCCCATTCCCAGTGAGCCGCTTTTTGCAGCACCAGGCGAAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENST00000359941.10 ENST00000610086.1 ENST00000653182.1 ENST00000654969.1 ENST00000661943.1 |
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| CDS CAA 72 bp | GTCTTAACCATCGCTTCCTGCATCTATCCCAGAGGGTaGGGTACCTTCGTGGGCGGAGCGCGGCCTGCCCAG | + |
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Preference number: 6 (lower is better) Translates to: VLTIASCIYPRG*GTFVGGARPAQ Trigger: CTGGGCAGGCCGCGCTCCGCCCACGAAGGTACCCAACCCTCTGGGATAGATGCAGGAAGCGATGGTTAAGAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000359941.10 ENST00000432193.6 ENST00000610086.1 ENST00000616845.1 ENST00000653182.1 ENST00000654969.1 ENST00000661943.1 |
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| CDS GCA 72 bp | GTCAGGCGCCAAGCTCCCCAGCATCATGCAGGAAGCTaGAGCCCCGCAGAGTTAGGACAGCTCATTTGGCAC | + |
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Preference number: 6 (lower is better) Translates to: VRRQAPQHHAGS*SPAELGQLIWH Trigger: GTGCCAAATGAGCTGTCCTAACTCTGCGGGGCTGCAGCTTCCTGCATGATGCTGGGGAGCTTGGCGCCTGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 10 transcripts: ENST00000359941.10 ENST00000416560.6 ENST00000421293.2 ENST00000432193.6 ENST00000542586.2 ENST00000610086.1 ENST00000616845.1 ENST00000653182.1 ENST00000654969.1 ENST00000661943.1 |
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| CDS CCA 72 bp | GTTCGCCTGGTGCTGCAAAAAGCGGCTCACTGGGAATaGGGAGGAGCGTGTGGTAAGCCAGACCTTCGTGGG | + |
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Preference number: 6 (lower is better) Translates to: VRLVLQKAAHWE*GGACGKPDLRG Trigger: CCCACGAAGGTCTGGCTTACCACACGCTCCTCCCCATTCCCAGTGAGCCGCTTTTTGCAGCACCAGGCGAAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000416560.6 ENST00000542586.2 |
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| CDS CCA 72 bp | GTAAGTGTTCGCCTGGTGCTGCAAAAAGCGGCTCACTaGGAATGGGGAGGAGCGTGTGGTAAGCCAGACCTT | + |
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Preference number: 6 (lower is better) Translates to: VSVRLVLQKAAH*EWGGACGKPDL Trigger: AAGGTCTGGCTTACCACACGCTCCTCCCCATTCCCAGTGAGCCGCTTTTTGCAGCACCAGGCGAACACTTAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000416560.6 ENST00000542586.2 |
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| CDS CCA 72 bp | CTGGACAAGTCACCTGTGAAGCCTTTCTTATCTGTGTaGCTGTGGCCATGTCTTAGGCAAGCCGCCCTGTGC | + |
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Preference number: 6 (lower is better) Translates to: LDKSPVKPFLSV*LWPCLRQAALC Trigger: GCACAGGGCGGCTTGCCTAAGACATGGCCACAGCCACACAGATAAGAAAGGCTTCACAGGTGACTTGTCCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000661943.1 |
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| CDS GCA 72 bp | GTGTGGCTGTGGCCATGTCTTAGGCAAGCCGCCCTGTaGAAGTTCCCTTATATGTGCCTTCAGGCTGTTCTT | + |
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Preference number: 6 (lower is better) Translates to: VWLWPCLRQAAL*KFPYMCLQAVL Trigger: AAGAACAGCCTGAAGGCACATATAAGGGAACTTGCACAGGGCGGCTTGCCTAAGACATGGCCACAGCCACAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000661943.1 |
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| CDS TCA 72 bp | GCGTGTGGTAAGCCAGACCTGCGGCGAGAAGTTGGGTaGAAATGGGTCTTAACCATCGCTTCCTGCATCTAT | + |
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Preference number: 6 (lower is better) Translates to: ACGKPDLRREVG*KWVLTIASCIY Trigger: ATAGATGCAGGAAGCGATGGTTAAGACCCATTTTCACCCAACTTCTCGCCGCAGGTCTGGCTTACCACACGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000359941.10 ENST00000610086.1 ENST00000653182.1 ENST00000654969.1 ENST00000661943.1 |
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| CDS CCA 72 bp | AAGTCACCTGTGAAGCCTTTCTTATCTGTGTGGCTGTaGCCATGTCTTAGGCAAGCCGCCCTGTGCAAGTTC | + |
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Preference number: 6 (lower is better) Translates to: KSPVKPFLSVWL*PCLRQAALCKF Trigger: GAACTTGCACAGGGCGGCTTGCCTAAGACATGGCCACAGCCACACAGATAAGAAAGGCTTCACAGGTGACTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000661943.1 |
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| CDS CAA 72 bp | CTGCCCTGCAGGAGACAATGCCACACTGAACTCTGCTaGGAGATACCTTGTGAAGCTCACTGGGAGTTTCTG | + |
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Preference number: 6 (lower is better) Translates to: LPCRRQCHTELC*EIPCEAHWEFL Trigger: CAGAAACTCCCAGTGAGCTTCACAAGGTATCTCCAAGCAGAGTTCAGTGTGGCATTGTCTCCTGCAGGGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000654969.1 |
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| CDS TCA 72 bp | CAGAACTTTGCTGAGCATGTCTGGACAAGTCACCTGTaGAGCCTTTCTTATCTGTGTGGCTGTGGCCATGTC | + |
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Preference number: 6 (lower is better) Translates to: QNFAEHVWTSHL*SLSYLCGCGHV Trigger: GACATGGCCACAGCCACACAGATAAGAAAGGCTTCACAGGTGACTTGTCCAGACATGCTCAGCAAAGTTCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000661943.1 |
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| CDS GCA 72 bp | TTTCTGCCCTGCAGGAGACAATGCCACACTGAACTCTaGTTGGAGATACCTTGTGAAGCTCACTGGGAGTTT | + |
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Preference number: 6 (lower is better) Translates to: FLPCRRQCHTEL*LEIPCEAHWEF Trigger: AAACTCCCAGTGAGCTTCACAAGGTATCTCCAAGCAGAGTTCAGTGTGGCATTGTCTCCTGCAGGGCAGAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000654969.1 |
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| CDS CAA 90 bp | ATGGGATTTCTGCCCTGCAGGAGACAATGCCACACTGAACTCTGCTaGGAGATACCTTGTGAAGCTCACTGGGAGTTTCTGAGAGCTATA | + |
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Preference number: 6 (lower is better) Translates to: MGFLPCRRQCHTELC*EIPCEAHWEFLRAI Trigger: TATAGCTCTCAGAAACTCCCAGTGAGCTTCACAAGGTATCTCCAAGCAGAGTTCAGTGTGGCATTGTCTCCTGCAGGGCAGAAATCCCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000654969.1 |
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| CDS TCA 72 bp | AGTCCTTGGTGGTTAAACCTGCGGCGAGAAGTTGGGTaGAAATGGGTCTTAACCATCGCTTCCTGCATCTAT | + |
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Preference number: 6 (lower is better) Translates to: SPWWLNLRREVG*KWVLTIASCIY Trigger: ATAGATGCAGGAAGCGATGGTTAAGACCCATTTTCACCCAACTTCTCGCCGCAGGTTTAACCACCAAGGACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000432193.6 ENST00000616845.1 |
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| CDS TCA 72 bp | TCAGTTGCACAAGGCCTCAGGGTGAAACTGCAGCTGTaGAGAGGTCATAATGGTTGTGAAAAAGACAGGCAG | + |
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Preference number: 6 (lower is better) Translates to: SVAQGLRVKLQL*RGHNGCEKDRQ Trigger: CTGCCTGTCTTTTTCACAACCATTATGACCTCTTCACAGCTGCAGTTTCACCCTGAGGCCTTGTGCAACTGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000654969.1 |
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| CDS CAA 72 bp | CACCCTGTCCTCCTAGTGTACATGTGGGCCCTTAGCTaGAGGTACTCCAAATTGCTTTGTTCCCCAAAGTAT | + |
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Preference number: 6 (lower is better) Translates to: HPVLLVYMWALS*RYSKLLCSPKY Trigger: ATACTTTGGGGAACAAAGCAATTTGGAGTACCTCAAGCTAAGGGCCCACATGTACACTAGGAGGACAGGGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000661943.1 |
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| CDS CCA 72 bp | AAATCACACACTTGTCATGACTACTCCACTTTCTCATaGGATTTCTGCCCTGCAGGAGACAATGCCACACTG | + |
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Preference number: 6 (lower is better) Translates to: KSHTCHDYSTFS*DFCPAGDNATL Trigger: CAGTGTGGCATTGTCTCCTGCAGGGCAGAAATCCCATGAGAAAGTGGAGTAGTCATGACAAGTGTGTGATTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000654969.1 |
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| CDS CCA 72 bp | CCAGCCATGGGTTTGTACCCTCAAATACCTATGAGTTaGGTGAATTCCTCTCTCCTTGAGGTCCTAAGAACA | + |
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Preference number: 6 (lower is better) Translates to: PAMGLYPQIPMS*VNSSLLEVLRT Trigger: TGTTCTTAGGACCTCAAGGAGAGAGGAATTCACCCAACTCATAGGTATTTGAGGGTACAAACCCATGGCTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000661943.1 |
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| CDS TCA 72 bp | CTGGCAGTTTATCTGCCTCTAATTCCTGCGGTTTCATaGGGAAAATGGAGGTTTCTCCCAAAATGGAACCTG | + |
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Preference number: 6 (lower is better) Translates to: LAVYLPLIPAVS*GKWRFLPKWNL Trigger: CAGGTTCCATTTTGGGAGAAACCTCCATTTTCCTCATGAAACCGCAGGAATTAGAGGCAGATAAACTGCCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000653182.1 |
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| CDS GCA 72 bp | ATTCTTCTCCCTGGCAGTTTATCTGCCTCTAATTCCTaGGGTTTCATGAGGAAAATGGAGGTTTCTCCCAAA | + |
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Preference number: 6 (lower is better) Translates to: ILLPGSLSASNS*GFMRKMEVSPK Trigger: TTTGGGAGAAACCTCCATTTTCCTCATGAAACCGCAGGAATTAGAGGCAGATAAACTGCCAGGGAGAAGAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000653182.1 |
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| CDS GCA 72 bp | CTTAGGCAAGCCGCCCTGTGCAAGTTCCCTTATATGTaGCTTCAGGCTGTTCTTTTGTTTGAAAGAATTCAA | + |
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Preference number: 6 (lower is better) Translates to: LRQAALCKFPYM*LQAVLLFERIQ Trigger: TTGAATTCTTTCAAACAAAAGAACAGCCTGAAGGCACATATAAGGGAACTTGCACAGGGCGGCTTGCCTAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000661943.1 |
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| CDS CCA 72 bp | TTAAAAATCCCAAGGCTGCTGACATGTACAGATAACTaGTGGCCACAGTTATGCCCACTAAGATTTGAGTGC | + |
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Preference number: 6 (lower is better) Translates to: LKIPRLLTCTDN*WPQLCPLRFEC Trigger: GCACTCAAATCTTAGTGGGCATAACTGTGGCCACCAGTTATCTGTACATGTCAGCAGCCTTGGGATTTTTAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000661943.1 |
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| CDS CAA 72 bp | AGAGCCCAAGTAGGAATCTGTGTGATCACTGTTCTTTaGCCAAGACACGGGGTGGACAATAAGATTCCTTTA | + |
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Preference number: 6 (lower is better) Translates to: RAQVGICVITVL*PRHGVDNKIPL Trigger: TAAAGGAATCTTATTGTCCACCCCGTGTCTTGGCAAAAGAACAGTGATCACACAGATTCCTACTTGGGCTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000359941.10 ENST00000416560.6 ENST00000542586.2 ENST00000610086.1 ENST00000653182.1 ENST00000654969.1 ENST00000661943.1 |
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| CDS CCA 72 bp | CCTTGGTTTTATTTTCCCAAAGAAACCTCTGGGTTATaGGTACCCTATTTACTCCCATCACCTGACAGGATT | + |
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Preference number: 6 (lower is better) Translates to: PWFYFPKETSGL*VPYLLPSPDRI Trigger: AATCCTGTCAGGTGATGGGAGTAAATAGGGTACCCATAACCCAGAGGTTTCTTTGGGAAAATAAAACCAAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000661943.1 |
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| CDS CAA 90 bp | TTAAAGGAAAGAGCCCAAGTAGGAATCTGTGTGATCACTGTTCTTTaGCCAAGACACGGGGTGGACAATAAGATTCCTTTACAAAGCACT | + |
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Preference number: 6 (lower is better) Translates to: LKERAQVGICVITVL*PRHGVDNKIPLQST Trigger: AGTGCTTTGTAAAGGAATCTTATTGTCCACCCCGTGTCTTGGCAAAAGAACAGTGATCACACAGATTCCTACTTGGGCTCTTTCCTTTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000359941.10 ENST00000416560.6 ENST00000542586.2 ENST00000610086.1 ENST00000653182.1 ENST00000654969.1 ENST00000661943.1 |
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| CDS TCA 72 bp | TTCAGGCTGTTCTTTTGTTTGAAAGAATTCAACCAATaGCCCACTTTAACTGCCTCCCTGACCTCTTTCTTC | + |
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Preference number: 6 (lower is better) Translates to: FRLFFCLKEFNQ*PTLTASLTSFF Trigger: GAAGAAAGAGGTCAGGGAGGCAGTTAAAGTGGGTCATTGGTTGAATTCTTTCAAACAAAAGAACAGCCTGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000661943.1 |
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| CDS GCA 72 bp | CAGGCCATCAGAAATTATCTTAGGGCCTCTCATGCATaGATTAAGAGTGGCAAAACAAAGTGGAGAAAAAGA | + |
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Preference number: 6 (lower is better) Translates to: QAIRNYLRASHA*IKSGKTKWRKR Trigger: TCTTTTTCTCCACTTTGTTTTGCCACTCTTAATGCATGCATGAGAGGCCCTAAGATAATTTCTGATGGCCTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000653182.1 |
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| CDS CCA 72 bp | CTTTGTTTTCTAAGGAATCCTACAAGTTTCCTGTGGTaGACTGTAAATCACACACTTGTCATGACTACTCCA | + |
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Preference number: 6 (lower is better) Translates to: LCFLRNPTSFLW*TVNHTLVMTTP Trigger: TGGAGTAGTCATGACAAGTGTGTGATTTACAGTCCACCACAGGAAACTTGTAGGATTCCTTAGAAAACAAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000654969.1 |
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| CDS CCA 72 bp | CCACTTTGTTTTCTAAGGAATCCTACAAGTTTCCTGTaGTGGACTGTAAATCACACACTTGTCATGACTACT | + |
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Preference number: 6 (lower is better) Translates to: PLCFLRNPTSFL*WTVNHTLVMTT Trigger: AGTAGTCATGACAAGTGTGTGATTTACAGTCCACCACAGGAAACTTGTAGGATTCCTTAGAAAACAAAGTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000654969.1 |
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| CDS CAA 72 bp | TGCAAGTTCCCTTATATGTGCCTTCAGGCTGTTCTTTaGTTTGAAAGAATTCAACCAATGACCCACTTTAAC | + |
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Preference number: 6 (lower is better) Translates to: CKFPYMCLQAVL*FERIQPMTHFN Trigger: GTTAAAGTGGGTCATTGGTTGAATTCTTTCAAACAAAAGAACAGCCTGAAGGCACATATAAGGGAACTTGCA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000661943.1 |
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