Pregenerated sensors for TP53RK-DT (Homo sapiens)

Ensembl gene IDs: ENSG00000271784

Ensembl transcript IDs: ENST00000606362.1

Found 8 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS GCA 90 bp	TCCGGAAAGAGACGACCAACTGAGAGGTGGGCCCCCAAAGCCGGCTaGGAGAGTCACCGAAGATTTCCGGAGAGCCAAGGAGTCGGGAAG	+
Preference number: 5 (lower is better) Translates to: SGKRRPTERWAPKAG*ESHRRFPESQGVGK Trigger: CTTCCCGACTCCTTGGCTCTCCGGAAATCTTCGGTGACTCTCGCAGCCGGCTTTGGGGGCCCACCTCTCAGTTGGTCGTCTCTTTCCGGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000606362.1
CDS CCA 90 bp	CGAGAGGCGCCGAAGTTTTCCGGAAAGAGACGACCAACTGAGAGGTaGGCCCCCAAAGCCGGCTGCGAGAGTCACCGAAGATTTCCGGAG	+
Preference number: 5 (lower is better) Translates to: REAPKFSGKRRPTER*APKAGCESHRRFPE Trigger: CTCCGGAAATCTTCGGTGACTCTCGCAGCCGGCTTTGGGGGCCCACCTCTCAGTTGGTCGTCTCTTTCCGGAAAACTTCGGCGCCTCTCG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000606362.1
CDS TCA 90 bp	CAAAAAGAGACTACTAGAGGGTACAGCTGTCCCGGAAGAGACTTCTaGAGAGAGCAAAGCGCGTCCGACGTTTTTCTCGAGAGGCGCCGA	+
Preference number: 5 (lower is better) Translates to: QKETTRGYSCPGRDF*REQSASDVFLERRR Trigger: TCGGCGCCTCTCGAGAAAAACGTCGGACGCGCTTTGCTCTCTTCAGAAGTCTCTTCCGGGACAGCTGTACCCTCTAGTAGTCTCTTTTTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000606362.1
CDS TCA 72 bp	AGAGGCGCCGAAGTTTTCCGGAAAGAGACGACCAACTaGGAGGTGGGCCCCCAAAGCCGGCTGCGAGAGTCA	+
Preference number: 6 (lower is better) Translates to: RGAEVFRKETTN*EVGPQSRLRES Trigger: TGACTCTCGCAGCCGGCTTTGGGGGCCCACCTCTCAGTTGGTCGTCTCTTTCCGGAAAACTTCGGCGCCTCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000606362.1
CDS GCA 72 bp	AGACGACCAACTGAGAGGTGGGCCCCCAAAGCCGGCTaGGAGAGTCACCGAAGATTTCCGGAGAGCCAAGGA	+
Preference number: 6 (lower is better) Translates to: RRPTERWAPKAG*ESHRRFPESQG Trigger: TCCTTGGCTCTCCGGAAATCTTCGGTGACTCTCGCAGCCGGCTTTGGGGGCCCACCTCTCAGTTGGTCGTCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000606362.1
CDS CCA 72 bp	CCGAAGTTTTCCGGAAAGAGACGACCAACTGAGAGGTaGGCCCCCAAAGCCGGCTGCGAGAGTCACCGAAGA	+
Preference number: 6 (lower is better) Translates to: PKFSGKRRPTER*APKAGCESHRR Trigger: TCTTCGGTGACTCTCGCAGCCGGCTTTGGGGGCCCACCTCTCAGTTGGTCGTCTCTTTCCGGAAAACTTCGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000606362.1
CDS TCA 72 bp	ACTACTAGAGGGTACAGCTGTCCCGGAAGAGACTTCTaGAGAGAGCAAAGCGCGTCCGACGTTTTTCTCGAG	+
Preference number: 6 (lower is better) Translates to: TTRGYSCPGRDF*REQSASDVFLE Trigger: CTCGAGAAAAACGTCGGACGCGCTTTGCTCTCTTCAGAAGTCTCTTCCGGGACAGCTGTACCCTCTAGTAGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000606362.1
CDS GCA 72 bp	ATGTGTGCGTGTGCAAAGTTCCGTATTGTAAGAATTTaGTACAGCCTGTGTTATTATAAGCTTTGTAATGAA	+
Preference number: 6 (lower is better) Translates to: MCACAKFRIVRI*YSLCYYKLCNE Trigger: TTCATTACAAAGCTTATAATAACACAGGCTGTAGCAAATTCTTACAATACGGAACTTTGCACACGCACACAT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000606362.1

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