RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TP53INP2 (Homo sapiens)

Ensembl gene IDs: ENSG00000078804

Ensembl transcript IDs: ENST00000374809.6, ENST00000374810.8, ENST00000451665.5

Found 400 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CAAAACCCTGAGCCCTTACTGGAGGGCAATGACAGCAGCCCAGGCTaGACAGGCTCTACCTGGTCAGAGCTGGGCTCAGGGTCCCCACCA +
Preference number: 1 (lower is better)
Translates to: QNPEPLLEGNDSSPG*TGSTWSELGSGSPP
Trigger: TGGTGGGGACCCTGAGCCCAGCTCTGACCAGGTAGAGCCTGTGCAGCCTGGGCTGCTGTCATTGCCCTCCAGTAAGGGCTCAGGGTTTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
3UTR CCA 90 bp GGAGCAGGGTTTGGCCTCTCTGAGCAAGCACAGTGCACACTCCCTTaGTGCCCTGCTCCCTGCAGCTTCTCAACGTGTCTGTCCTGTCCG +
Preference number: 1 (lower is better)
Translates to: GAGFGLSEQAQCTLP*CPAPCSFSTCLSCP
Trigger: CGGACAGGACAGACACGTTGAGAAGCTGCAGGGAGCAGGGCACCAAGGGAGTGTGCACTGTGCTTGCTCAGAGAGGCCAAACCCTGCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
3UTR GCA 90 bp GCAGGGTTTGGCCTCTCTGAGCAAGCACAGTGCACACTCCCTTGGTaGCCTGCTCCCTGCAGCTTCTCAACGTGTCTGTCCTGTCCGCAT +
Preference number: 1 (lower is better)
Translates to: AGFGLSEQAQCTLPW*PAPCSFSTCLSCPH
Trigger: ATGCGGACAGGACAGACACGTTGAGAAGCTGCAGGGAGCAGGGCACCAAGGGAGTGTGCACTGTGCTTGCTCAGAGAGGCCAAACCCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
3UTR CCA 90 bp AGAAGCCCTGTGGCCTGCATGTCTCCTAAGCTAGTTCTAGCACCTTaGGCTTGTGAACAGACGGCCAGGATGGTAGGGCCTTGCCCAGCT +
Preference number: 1 (lower is better)
Translates to: RSPVACMSPKLVLAP*ACEQTARMVGPCPA
Trigger: AGCTGGGCAAGGCCCTACCATCCTGGCCGTCTGTTCACAAGCCCAAGGTGCTAGAACTAGCTTAGGAGACATGCAGGCCACAGGGCTTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
3UTR CCA 90 bp TACAAGGCCAGAGGCAAGGTGAAGACTGAGCTGTCAGCCTTGGGATaGCTTCACCCCATGGTGTGTCCTCCAGCATCACTGCTCTGCACG +
Preference number: 1 (lower is better)
Translates to: YKARGKVKTELSALG*LHPMVCPPASLLCT
Trigger: CGTGCAGAGCAGTGATGCTGGAGGACACACCATGGGGTGAAGCCATCCCAAGGCTGACAGCTCAGTCTTCACCTTGCCTCTGGCCTTGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
3UTR TCA 90 bp AATGGGAAGCAACTCAGGGCATCCCAAGAGGCTGTTGCTGGTGTCTaGGCCCAAAATTCAGTCTCACCACAAGAAGGGGAGGCTGGTGGC +
Preference number: 1 (lower is better)
Translates to: NGKQLRASQEAVAGV*AQNSVSPQEGEAGG
Trigger: GCCACCAGCCTCCCCTTCTTGTGGTGAGACTGAATTTTGGGCTCAGACACCAGCAACAGCCTCTTGGGATGCCCTGAGTTGCTTCCCATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
3UTR TCA 90 bp GCCCTGCTGGGGCTAGACTGGCAAAGGCTGGAAAGACACCCAGCTTaGAGGAACCACTCAGACTTACTGGGGAATAACTGGAAGTCACTG +
Preference number: 1 (lower is better)
Translates to: ALLGLDWQRLERHPA*RNHSDLLGNNWKSL
Trigger: CAGTGACTTCCAGTTATTCCCCAGTAAGTCTGAGTGGTTCCTTCAAGCTGGGTGTCTTTCCAGCCTTTGCCAGTCTAGCCCCAGCAGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
3UTR GCA 90 bp GAGCAGGCATACTCTAAAACAGCACCAAACTGCATTCATACACGGTaGCCTGCTGGGGCTAGACTGGCAAAGGCTGGAAAGACACCCAGC +
Preference number: 1 (lower is better)
Translates to: EQAYSKTAPNCIHTR*PAGARLAKAGKTPS
Trigger: GCTGGGTGTCTTTCCAGCCTTTGCCAGTCTAGCCCCAGCAGGGCACCGTGTATGAATGCAGTTTGGTGCTGTTTTAGAGTATGCCTGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
3UTR CCA 90 bp AAGAGGAAATGGGAAGCAACTCAGGGCATCCCAAGAGGCTGTTGCTaGTGTCTGAGCCCAAAATTCAGTCTCACCACAAGAAGGGGAGGC +
Preference number: 1 (lower is better)
Translates to: KRKWEATQGIPRGCC*CLSPKFSLTTRRGG
Trigger: GCCTCCCCTTCTTGTGGTGAGACTGAATTTTGGGCTCAGACACCAGCAACAGCCTCTTGGGATGCCCTGAGTTGCTTCCCATTTCCTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
3UTR CCA 90 bp GGAACTAGGTGGCAGGGCGAGAGGGAAAGTAGTAGAAGGGGGCTATaGTGTGTCTGCATTCAGTCCCCTCACATAAAGCCACATGGATCT +
Preference number: 1 (lower is better)
Translates to: GTRWQGERESSRRGL*CVCIQSPHIKPHGS
Trigger: AGATCCATGTGGCTTTATGTGAGGGGACTGAATGCAGACACACCATAGCCCCCTTCTACTACTTTCCCTCTCGCCCTGCCACCTAGTTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
3UTR TCA 90 bp AGGGAGATTCAGCTCTTGGAGGTGCCGAAGACCCTAGGCTGGCTGTaGAGTGCCCAAGTGGTAGCTGGAAGAATAAAAGCAACTAGGTTC +
Preference number: 1 (lower is better)
Translates to: REIQLLEVPKTLGWL*SAQVVAGRIKATRF
Trigger: GAACCTAGTTGCTTTTATTCTTCCAGCTACCACTTGGGCACTTCACAGCCAGCCTAGGGTCTTCGGCACCTCCAAGAGCTGAATCTCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
3UTR CCA 90 bp GCCAGTCTCAACACAAAACACCCAACAGGGATGCACTCAACTTGTTaGTTCCATGTGGAACTAGGTGGCAGGGCGAGAGGGAAAGTAGTA +
Preference number: 1 (lower is better)
Translates to: ASLNTKHPTGMHSTC*FHVELGGRARGKVV
Trigger: TACTACTTTCCCTCTCGCCCTGCCACCTAGTTCCACATGGAACCAACAAGTTGAGTGCATCCCTGTTGGGTGTTTTGTGTTGAGACTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
3UTR CCA 90 bp CTTGGGAGAGGAGCAAGGCTGTCAACTACTGGGGCCCTAGTGGACTaGCGTGGGAGCTTTGATCCGTTTTTAGTGTTAATTTGGCTTATT +
Preference number: 1 (lower is better)
Translates to: LGRGARLSTTGALVD*RGSFDPFLVLIWLI
Trigger: AATAAGCCAAATTAACACTAAAAACGGATCAAAGCTCCCACGCCAGTCCACTAGGGCCCCAGTAGTTGACAGCCTTGCTCCTCTCCCAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
3UTR CCA 90 bp CGTGGGAGCTTTGATCCGTTTTTAGTGTTAATTTGGCTTATTCCCTaGAATAGGAGACCCCATCAGGTCTTCCTCTGTCCTCATCCCAGC +
Preference number: 1 (lower is better)
Translates to: RGSFDPFLVLIWLIP*NRRPHQVFLCPHPS
Trigger: GCTGGGATGAGGACAGAGGAAGACCTGATGGGGTCTCCTATTCCAGGGAATAAGCCAAATTAACACTAAAAACGGATCAAAGCTCCCACG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
3UTR TCA 90 bp TCACTGTTTGATGTAACTGGGACTCACTCTAGAAACGGGTCCCTCTaGCAGTTTTGGCAAAGTGCTGGTAGTACTGACATTAATACTCAC +
Preference number: 1 (lower is better)
Translates to: SLFDVTGTHSRNGSL*QFWQSAGSTDINTH
Trigger: GTGAGTATTAATGTCAGTACTACCAGCACTTTGCCAAAACTGTCAGAGGGACCCGTTTCTAGAGTGAGTCCCAGTTACATCAAACAGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
3UTR TCA 90 bp AGTATGACAAGGGCTGATGCTTCAGGAGTCAGACTAGCAGGAGACTaGGTAGTGTTGGTTCTTAGAAATCTATACACAATTAAAATATTG +
Preference number: 1 (lower is better)
Translates to: SMTRADASGVRLAGD*VVLVLRNLYTIKIL
Trigger: CAATATTTTAATTGTGTATAGATTTCTAAGAACCAACACTACTCAGTCTCCTGCTAGTCTGACTCCTGAAGCATCAGCCCTTGTCATACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
3UTR-3UTR CCA 90 bp CCCTGCTCCCTGCAGCTTCTCAACGTGTCTGTCCTGTCCGCATCTCCAATAGGCACCCTGAGCCCTTACTaGAGGGCAATGACAGCAGCC +
Preference number: 2 (lower is better)
Translates to: PCSLQLLNVSVLSASPIGTLSPY*RAMTAA
Trigger: GGCTGCTGTCATTGCCCTCCAGTAAGGGCTCAGGGT...GCCTATTGGAGATGCGGACAGGACAGACACGTTGAGAAGCTGCAGGGAGCAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
3UTR-3UTR TCA 90 bp ATTCATACACGGTGCCCTGCTGGGGCTAGACTGGCAAAGGCTGGAAAGACACCCAGCACCTTGGGCTTGTaGACAGACGGCCAGGATGGT +
Preference number: 2 (lower is better)
Translates to: IHTRCPAGARLAKAGKTPSTLGL*TDGQDG
Trigger: ACCATCCTGGCCGTCTGTTCACAAGCCCAAGGTGCT...GGGTGTCTTTCCAGCCTTTGCCAGTCTAGCCCCAGCAGGGCACCGTGTATGAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
3UTR-3UTR GCA 90 bp TTCATACACGGTGCCCTGCTGGGGCTAGACTGGCAAAGGCTGGAAAGACACCCATGGTGCCCTGCTCCCTaGAGCTTCTCAACGTGTCTG +
Preference number: 2 (lower is better)
Translates to: FIHGALLGLDWQRLERHPWCPAP*SFSTCL
Trigger: CAGACACGTTGAGAAGCTGCAGGGAGCAGGGCACCA...TGGGTGTCTTTCCAGCCTTTGCCAGTCTAGCCCCAGCAGGGCACCGTGTATGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
3UTR-3UTR GCA 90 bp TTCATACACGGTGCCCTGCTGGGGCTAGACTGGCAAAGGCTGGAAAGACACCCAAGGATGGTAGGGCCTTaGCCAGCTTCTACTCGGGTG +
Preference number: 2 (lower is better)
Translates to: FIHGALLGLDWQRLERHPRMVGP*PASTRV
Trigger: CACCCGAGTAGAAGCTGGGCAAGGCCCTACCATCCT...TGGGTGTCTTTCCAGCCTTTGCCAGTCTAGCCCCAGCAGGGCACCGTGTATGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
3UTR-3UTR GCA 90 bp GAATGCAGAGTTTTCTCCAAGCTTCAGCTTGGCTGTGAGGCCTGGAAACCTAGAGAGGCTGGTGGCCCCTaGCCCTTCTGTCTCCCCCAG +
Preference number: 2 (lower is better)
Translates to: ECRVFSKLQLGCEAWKPREAGGP*PFCLPQ
Trigger: CTGGGGGAGACAGAAGGGGCAGGGGCCACCAGCCTC...TCTAGGTTTCCAGGCCTCACAGCCAAGCTGAAGCTTGGAGAAAACTCTGCATTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
3UTR-3UTR CCA 90 bp TTCATACACGGTGCCCTGCTGGGGCTAGACTGGCAAAGGCTGGAAAGACACCCACTGAGCTGTCAGCCTTaGGATGGCTTCACCCCATGG +
Preference number: 2 (lower is better)
Translates to: FIHGALLGLDWQRLERHPLSCQP*DGFTPW
Trigger: CCATGGGGTGAAGCCATCCCAAGGCTGACAGCTCAG...TGGGTGTCTTTCCAGCCTTTGCCAGTCTAGCCCCAGCAGGGCACCGTGTATGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
3UTR-3UTR TCA 90 bp CCCTGCTCCCTGCAGCTTCTCAACGTGTCTGTCCTGTCCGCATCTCCAATAGGCAGTGAGGGTGAAGGGTaGATGGGTTCAGAGGCAGAT +
Preference number: 2 (lower is better)
Translates to: PCSLQLLNVSVLSASPIGSEGEG*MGSEAD
Trigger: ATCTGCCTCTGAACCCATTCACCCTTCACCCTCACT...GCCTATTGGAGATGCGGACAGGACAGACACGTTGAGAAGCTGCAGGGAGCAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
3UTR-3UTR TCA 90 bp TTCATACACGGTGCCCTGCTGGGGCTAGACTGGCAAAGGCTGGAAAGACACCCAGTTGAAGGTGGGGAATaGGCCAGATCAGGGACTGGA +
Preference number: 2 (lower is better)
Translates to: FIHGALLGLDWQRLERHPVEGGE*ARSGTG
Trigger: TCCAGTCCCTGATCTGGCTCATTCCCCACCTTCAAC...TGGGTGTCTTTCCAGCCTTTGCCAGTCTAGCCCCAGCAGGGCACCGTGTATGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
3UTR-3UTR GCA 90 bp GCCAGTCTCAACACAAAACACCCAACAGGGATGCACTCAACTTGTTGGTTCCATGAGGCTGGTGGCCCCTaGCCCTTCTGTCTCCCCCAG +
Preference number: 2 (lower is better)
Translates to: ASLNTKHPTGMHSTCWFHEAGGP*PFCLPQ
Trigger: CTGGGGGAGACAGAAGGGGCAGGGGCCACCAGCCTC...ATGGAACCAACAAGTTGAGTGCATCCCTGTTGGGTGTTTTGTGTTGAGACTGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
3UTR-3UTR CCA 90 bp TTCATACACGGTGCCCTGCTGGGGCTAGACTGGCAAAGGCTGGAAAGACACCCACTGTCAGCCTTGGGATaGCTTCACCCCATGGTGTGT +
Preference number: 2 (lower is better)
Translates to: FIHGALLGLDWQRLERHPLSALG*LHPMVC
Trigger: ACACACCATGGGGTGAAGCCATCCCAAGGCTGACAG...TGGGTGTCTTTCCAGCCTTTGCCAGTCTAGCCCCAGCAGGGCACCGTGTATGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
3UTR CAA 90 bp GTGAAATACAAGGCCAGAGGCAAGGTGAAGACTGAGCTGTCAGCCTaGGGATGGCTTCACCCCATGGTGTGTCCTCCAGCATCACTGCTC +
Preference number: 2 (lower is better)
Translates to: VKYKARGKVKTELSA*GWLHPMVCPPASLL
Trigger: GAGCAGTGATGCTGGAGGACACACCATGGGGTGAAGCCATCCCAAGGCTGACAGCTCAGTCTTCACCTTGCCTCTGGCCTTGTATTTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
3UTR CAA 90 bp GGTGAATGGGTTCAGAGGCAGATTAGAGGATCAGAGATGGGGAAATaGAGGGTGTCGGGGAAGGAACGGCTATCACCCAACCTCACACGC +
Preference number: 2 (lower is better)
Translates to: GEWVQRQIRGSEMGK*RVSGKERLSPNLTR
Trigger: GCGTGTGAGGTTGGGTGATAGCCGTTCCTTCCCCGACACCCTCAATTTCCCCATCTCTGATCCTCTAATCTGCCTCTGAACCCATTCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
3UTR-3UTR TCA 90 bp AGAGTTTTCTCCAAGCTTCAGCTTGGCTGTGAGGCCTGGAAACCTAGAGTTGGGAGCACCTTGGGCTTGTaGACAGACGGCCAGGATGGT +
Preference number: 2 (lower is better)
Translates to: RVFSKLQLGCEAWKPRVGSTLGL*TDGQDG
Trigger: ACCATCCTGGCCGTCTGTTCACAAGCCCAAGGTGCT...CCCAACTCTAGGTTTCCAGGCCTCACAGCCAAGCTGAAGCTTGGAGAAAACTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
3UTR-3UTR TCA 90 bp AGAGTTTTCTCCAAGCTTCAGCTTGGCTGTGAGGCCTGGAAACCTAGAGTTGGGAGGCCAGAGGCAAGGTaGAGACTGAGCTGTCAGCCT +
Preference number: 2 (lower is better)
Translates to: RVFSKLQLGCEAWKPRVGRPEAR*RLSCQP
Trigger: AGGCTGACAGCTCAGTCTTCACCTTGCCTCTGGCCT...CCCAACTCTAGGTTTCCAGGCCTCACAGCCAAGCTGAAGCTTGGAGAAAACTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
3UTR-3UTR TCA 90 bp TTCATACACGGTGCCCTGCTGGGGCTAGACTGGCAAAGGCTGGAAAGACACCCAATACTGAGCAGGGTGTaGAATACAAGGCCAGAGGCA +
Preference number: 2 (lower is better)
Translates to: FIHGALLGLDWQRLERHPILSRV*NTRPEA
Trigger: TGCCTCTGGCCTTGTATTTCACACCCTGCTCAGTAT...TGGGTGTCTTTCCAGCCTTTGCCAGTCTAGCCCCAGCAGGGCACCGTGTATGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
3UTR-3UTR TCA 90 bp TTCATACACGGTGCCCTGCTGGGGCTAGACTGGCAAAGGCTGGAAAGACACCCAGCTGTTGCTGGTGTCTaGGCCCAAAATTCAGTCTCA +
Preference number: 2 (lower is better)
Translates to: FIHGALLGLDWQRLERHPAVAGV*AQNSVS
Trigger: TGAGACTGAATTTTGGGCTCAGACACCAGCAACAGC...TGGGTGTCTTTCCAGCCTTTGCCAGTCTAGCCCCAGCAGGGCACCGTGTATGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
3UTR-3UTR GCA 90 bp CTCAACTTGTTGGTTCCATGTGGAACTAGGTGGCAGGGCGAGAGGGAAAGTAGTGAGGGCAGCTGCCTTTaGCCTCATGGGAATGCAGAG +
Preference number: 2 (lower is better)
Translates to: LNLLVPCGTRWQGERESSEGSCL*PHGNAE
Trigger: CTCTGCATTCCCATGAGGGCAAAGGCAGCTGCCCTC...ACTACTTTCCCTCTCGCCCTGCCACCTAGTTCCACATGGAACCAACAAGTTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
3UTR-3UTR CCA 90 bp CACGTCACATGGTCAAAGTCTCCTCATTTCAGCCAGTCTCAACACAAAACACCCGGGGCCCTAGTGGACTaGCGTGGGAGCTTTGATCCG +
Preference number: 2 (lower is better)
Translates to: HVTWSKSPHFSQSQHKTPGALVD*RGSFDP
Trigger: CGGATCAAAGCTCCCACGCCAGTCCACTAGGGCCCC...GGGTGTTTTGTGTTGAGACTGGCTGAAATGAGGAGACTTTGACCATGTGACGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
3UTR-3UTR TCA 90 bp GCCAGTCTCAACACAAAACACCCAACAGGGATGCACTCAACTTGTTGGTTCCATCACTGCTCTGCACGCTaGCCTAGGGTGTGTGCCCTT +
Preference number: 2 (lower is better)
Translates to: ASLNTKHPTGMHSTCWFHHCSAR*PRVCAL
Trigger: AAGGGCACACACCCTAGGTCAGCGTGCAGAGCAGTG...ATGGAACCAACAAGTTGAGTGCATCCCTGTTGGGTGTTTTGTGTTGAGACTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
3UTR-3UTR GCA 90 bp AAGTCTCCTCATTTCAGCCAGTCTCAACACAAAACACCCAACAGGGATGCACTCTGCACACTCCCTTGGTaGCCTGCTCCCTGCAGCTTC +
Preference number: 2 (lower is better)
Translates to: KSPHFSQSQHKTPNRDALCTLPW*PAPCSF
Trigger: GAAGCTGCAGGGAGCAGGGCACCAAGGGAGTGTGCA...GAGTGCATCCCTGTTGGGTGTTTTGTGTTGAGACTGGCTGAAATGAGGAGACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
3UTR-3UTR CCA 90 bp GAATGCAGAGTTTTCTCCAAGCTTCAGCTTGGCTGTGAGGCCTGGAAACCTAGACCAGAGGTAGAGGACTaGAGGGCAAGGGTGAAAGGG +
Preference number: 2 (lower is better)
Translates to: ECRVFSKLQLGCEAWKPRPEVED*RARVKG
Trigger: CCCTTTCACCCTTGCCCTCCAGTCCTCTACCTCTGG...TCTAGGTTTCCAGGCCTCACAGCCAAGCTGAAGCTTGGAGAAAACTCTGCATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
3UTR-3UTR CCA 90 bp AGAGTTTTCTCCAAGCTTCAGCTTGGCTGTGAGGCCTGGAAACCTAGAGTTGGGTGCCTAGAAGCCCTGTaGCCTGCATGTCTCCTAAGC +
Preference number: 2 (lower is better)
Translates to: RVFSKLQLGCEAWKPRVGCLEAL*PACLLS
Trigger: GCTTAGGAGACATGCAGGCCACAGGGCTTCTAGGCA...CCCAACTCTAGGTTTCCAGGCCTCACAGCCAAGCTGAAGCTTGGAGAAAACTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
3UTR-3UTR CCA 90 bp AGAGTTTTCTCCAAGCTTCAGCTTGGCTGTGAGGCCTGGAAACCTAGAGTTGGGGATGGCTTCACCCCATaGTGTGTCCTCCAGCATCAC +
Preference number: 2 (lower is better)
Translates to: RVFSKLQLGCEAWKPRVGDGFTP*CVLQHH
Trigger: GTGATGCTGGAGGACACACCATGGGGTGAAGCCATC...CCCAACTCTAGGTTTCCAGGCCTCACAGCCAAGCTGAAGCTTGGAGAAAACTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
3UTR-3UTR CCA 90 bp AGAGTTTTCTCCAAGCTTCAGCTTGGCTGTGAGGCCTGGAAACCTAGAGTTGGGAGACAGTGGGAGTCCTaGACTCCTACTCAGGACTGC +
Preference number: 2 (lower is better)
Translates to: RVFSKLQLGCEAWKPRVGRQWES*TPTQDC
Trigger: GCAGTCCTGAGTAGGAGTCCAGGACTCCCACTGTCT...CCCAACTCTAGGTTTCCAGGCCTCACAGCCAAGCTGAAGCTTGGAGAAAACTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
3UTR-3UTR TCA 90 bp AGAGTTTTCTCCAAGCTTCAGCTTGGCTGTGAGGCCTGGAAACCTAGAGTTGGGAGTAGGGGGCATGGATaGTTAGATGCTGGGTATGGG +
Preference number: 2 (lower is better)
Translates to: RVFSKLQLGCEAWKPRVGSRGHG*LDAGYG
Trigger: CCCATACCCAGCATCTAATCATCCATGCCCCCTACT...CCCAACTCTAGGTTTCCAGGCCTCACAGCCAAGCTGAAGCTTGGAGAAAACTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
3UTR-3UTR TCA 90 bp GAATGCAGAGTTTTCTCCAAGCTTCAGCTTGGCTGTGAGGCCTGGAAACCTAGAAGGGTTTGGCCTCTCTaGGCAAGCACAGTGCACACT +
Preference number: 2 (lower is better)
Translates to: ECRVFSKLQLGCEAWKPRRVWPL*ASTVHT
Trigger: AGTGTGCACTGTGCTTGCTCAGAGAGGCCAAACCCT...TCTAGGTTTCCAGGCCTCACAGCCAAGCTGAAGCTTGGAGAAAACTCTGCATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
3UTR-3UTR TCA 90 bp GAATGCAGAGTTTTCTCCAAGCTTCAGCTTGGCTGTGAGGCCTGGAAACCTAGAAGGCAAGGTGAAGACTaGGCTGTCAGCCTTGGGATG +
Preference number: 2 (lower is better)
Translates to: ECRVFSKLQLGCEAWKPRRQGED*AVSLGM
Trigger: CATCCCAAGGCTGACAGCTCAGTCTTCACCTTGCCT...TCTAGGTTTCCAGGCCTCACAGCCAAGCTGAAGCTTGGAGAAAACTCTGCATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
3UTR-3UTR GCA 90 bp CACGTCACATGGTCAAAGTCTCCTCATTTCAGCCAGTCTCAACACAAAACACCCTGGTGCCCTGCTCCCTaGAGCTTCTCAACGTGTCTG +
Preference number: 2 (lower is better)
Translates to: HVTWSKSPHFSQSQHKTPWCPAP*SFSTCL
Trigger: CAGACACGTTGAGAAGCTGCAGGGAGCAGGGCACCA...GGGTGTTTTGTGTTGAGACTGGCTGAAATGAGGAGACTTTGACCATGTGACGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
3UTR-3UTR GCA 90 bp GAATGCAGAGTTTTCTCCAAGCTTCAGCTTGGCTGTGAGGCCTGGAAACCTAGATCTGAGCAAGCACAGTaGACACTCCCTTGGTGCCCT +
Preference number: 2 (lower is better)
Translates to: ECRVFSKLQLGCEAWKPRSEQAQ*TLPWCP
Trigger: AGGGCACCAAGGGAGTGTGCACTGTGCTTGCTCAGA...TCTAGGTTTCCAGGCCTCACAGCCAAGCTGAAGCTTGGAGAAAACTCTGCATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
3UTR-3UTR GCA 90 bp TTCATACACGGTGCCCTGCTGGGGCTAGACTGGCAAAGGCTGGAAAGACACCCATCAGATTTCAGGGCCTaGAGAAGGGTGGATTATAGA +
Preference number: 2 (lower is better)
Translates to: FIHGALLGLDWQRLERHPSDFRA*RRVDYR
Trigger: TCTATAATCCACCCTTCTGCAGGCCCTGAAATCTGA...TGGGTGTCTTTCCAGCCTTTGCCAGTCTAGCCCCAGCAGGGCACCGTGTATGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
3UTR-3UTR GCA 90 bp CACGTCACATGGTCAAAGTCTCCTCATTTCAGCCAGTCTCAACACAAAACACCCAGGATGGTAGGGCCTTaGCCAGCTTCTACTCGGGTG +
Preference number: 2 (lower is better)
Translates to: HVTWSKSPHFSQSQHKTPRMVGP*PASTRV
Trigger: CACCCGAGTAGAAGCTGGGCAAGGCCCTACCATCCT...GGGTGTTTTGTGTTGAGACTGGCTGAAATGAGGAGACTTTGACCATGTGACGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
3UTR-3UTR GCA 90 bp GGTGGTTGTCTCCTTGAGTCTGTTGACACGTCACATGGTCAAAGTCTCCTCATTTGTGTGCCCTTTCCCTaGCTAGAAGCCCTGTGGCCT +
Preference number: 2 (lower is better)
Translates to: GGCLLESVDTSHGQSLLICVPFP*LEALWP
Trigger: AGGCCACAGGGCTTCTAGGCAGGGAAAGGGCACACA...AATGAGGAGACTTTGACCATGTGACGTGTCAACAGACTCAAGGAGACAACCACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
3UTR-3UTR GCA 90 bp CACGTCACATGGTCAAAGTCTCCTCATTTCAGCCAGTCTCAACACAAAACACCCTGTGTGCCCTTTCCCTaGCTAGAAGCCCTGTGGCCT +
Preference number: 2 (lower is better)
Translates to: HVTWSKSPHFSQSQHKTPCVPFP*LEALWP
Trigger: AGGCCACAGGGCTTCTAGGCAGGGAAAGGGCACACA...GGGTGTTTTGTGTTGAGACTGGCTGAAATGAGGAGACTTTGACCATGTGACGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
3UTR-3UTR GCA 90 bp AGAGTTTTCTCCAAGCTTCAGCTTGGCTGTGAGGCCTGGAAACCTAGAGTTGGGACTCCTACTCAGGACTaGTGGCTAGCCATACTGAGC +
Preference number: 2 (lower is better)
Translates to: RVFSKLQLGCEAWKPRVGTPTQD*WLAILS
Trigger: GCTCAGTATGGCTAGCCAGCAGTCCTGAGTAGGAGT...CCCAACTCTAGGTTTCCAGGCCTCACAGCCAAGCTGAAGCTTGGAGAAAACTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
3UTR-3UTR GCA 90 bp GGTGGTTGTCTCCTTGAGTCTGTTGACACGTCACATGGTCAAAGTCTCCTCATTGAGGGCAGCTGCCTTTaGCCTCATGGGAATGCAGAG +
Preference number: 2 (lower is better)
Translates to: GGCLLESVDTSHGQSLLIEGSCL*PHGNAE
Trigger: CTCTGCATTCCCATGAGGGCAAAGGCAGCTGCCCTC...AATGAGGAGACTTTGACCATGTGACGTGTCAACAGACTCAAGGAGACAACCACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
3UTR-3UTR GCA 90 bp CACGTCACATGGTCAAAGTCTCCTCATTTCAGCCAGTCTCAACACAAAACACCCGTCAGGGAGGGCAGCTaGCTTTGCCCTCATGGGAAT +
Preference number: 2 (lower is better)
Translates to: HVTWSKSPHFSQSQHKTPVREGS*LCPHGN
Trigger: ATTCCCATGAGGGCAAAGGCAGCTGCCCTCCCTGAC...GGGTGTTTTGTGTTGAGACTGGCTGAAATGAGGAGACTTTGACCATGTGACGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
3UTR-3UTR CCA 90 bp GCCAGTCTCAACACAAAACACCCAACAGGGATGCACTCAACTTGTTGGTTCCATACCCTGAGCCCTTACTaGAGGGCAATGACAGCAGCC +
Preference number: 2 (lower is better)
Translates to: ASLNTKHPTGMHSTCWFHTLSPY*RAMTAA
Trigger: GGCTGCTGTCATTGCCCTCCAGTAAGGGCTCAGGGT...ATGGAACCAACAAGTTGAGTGCATCCCTGTTGGGTGTTTTGTGTTGAGACTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
3UTR-3UTR CCA 90 bp CACGTCACATGGTCAAAGTCTCCTCATTTCAGCCAGTCTCAACACAAAACACCCAAGGCTGTCAACTACTaGGGCCCTAGTGGACTGGCG +
Preference number: 2 (lower is better)
Translates to: HVTWSKSPHFSQSQHKTPKAVNY*GPSGLA
Trigger: CGCCAGTCCACTAGGGCCCCAGTAGTTGACAGCCTT...GGGTGTTTTGTGTTGAGACTGGCTGAAATGAGGAGACTTTGACCATGTGACGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
3UTR-3UTR CCA 90 bp GCCAGTCTCAACACAAAACACCCAACAGGGATGCACTCAACTTGTTGGTTCCATAAGGCTGTCAACTACTaGGGCCCTAGTGGACTGGCG +
Preference number: 2 (lower is better)
Translates to: ASLNTKHPTGMHSTCWFHKAVNY*GPSGLA
Trigger: CGCCAGTCCACTAGGGCCCCAGTAGTTGACAGCCTT...ATGGAACCAACAAGTTGAGTGCATCCCTGTTGGGTGTTTTGTGTTGAGACTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
3UTR-3UTR CCA 90 bp TTCATACACGGTGCCCTGCTGGGGCTAGACTGGCAAAGGCTGGAAAGACACCCAACCACTCAGACTTACTaGGGAATAACTGGAAGTCAC +
Preference number: 2 (lower is better)
Translates to: FIHGALLGLDWQRLERHPTTQTY*GITGSH
Trigger: GTGACTTCCAGTTATTCCCCAGTAAGTCTGAGTGGT...TGGGTGTCTTTCCAGCCTTTGCCAGTCTAGCCCCAGCAGGGCACCGTGTATGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
3UTR CAA 90 bp AGCCAGTCTCAACACAAAACACCCAACAGGGATGCACTCAACTTGTaGGTTCCATGTGGAACTAGGTGGCAGGGCGAGAGGGAAAGTAGT +
Preference number: 2 (lower is better)
Translates to: SQSQHKTPNRDALNL*VPCGTRWQGERESS
Trigger: ACTACTTTCCCTCTCGCCCTGCCACCTAGTTCCACATGGAACCAACAAGTTGAGTGCATCCCTGTTGGGTGTTTTGTGTTGAGACTGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
3UTR CAA 90 bp TTCAGCCAGTCTCAACACAAAACACCCAACAGGGATGCACTCAACTaGTTGGTTCCATGTGGAACTAGGTGGCAGGGCGAGAGGGAAAGT +
Preference number: 2 (lower is better)
Translates to: FSQSQHKTPNRDALN*LVPCGTRWQGERES
Trigger: ACTTTCCCTCTCGCCCTGCCACCTAGTTCCACATGGAACCAACAAGTTGAGTGCATCCCTGTTGGGTGTTTTGTGTTGAGACTGGCTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
3UTR CAA 90 bp GGCATGCCACATGACCCAGTTGAGGTGGTTGTCTCCTTGAGTCTGTaGACACGTCACATGGTCAAAGTCTCCTCATTTCAGCCAGTCTCA +
Preference number: 2 (lower is better)
Translates to: GMPHDPVEVVVSLSL*TRHMVKVSSFQPVS
Trigger: TGAGACTGGCTGAAATGAGGAGACTTTGACCATGTGACGTGTCAACAGACTCAAGGAGACAACCACCTCAACTGGGTCATGTGGCATGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
3UTR-3UTR TCA 90 bp AGAGTTTTCTCCAAGCTTCAGCTTGGCTGTGAGGCCTGGAAACCTAGAGTTGGGGCTGTTGCTGGTGTCTaGGCCCAAAATTCAGTCTCA +
Preference number: 2 (lower is better)
Translates to: RVFSKLQLGCEAWKPRVGAVAGV*AQNSVS
Trigger: TGAGACTGAATTTTGGGCTCAGACACCAGCAACAGC...CCCAACTCTAGGTTTCCAGGCCTCACAGCCAAGCTGAAGCTTGGAGAAAACTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
3UTR-3UTR GCA 90 bp GGTGGTTGTCTCCTTGAGTCTGTTGACACGTCACATGGTCAAAGTCTCCTCATTTCTGAGCAAGCACAGTaGACACTCCCTTGGTGCCCT +
Preference number: 2 (lower is better)
Translates to: GGCLLESVDTSHGQSLLISEQAQ*TLPWCP
Trigger: AGGGCACCAAGGGAGTGTGCACTGTGCTTGCTCAGA...AATGAGGAGACTTTGACCATGTGACGTGTCAACAGACTCAAGGAGACAACCACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
3UTR-3UTR GCA 90 bp CTCAACTTGTTGGTTCCATGTGGAACTAGGTGGCAGGGCGAGAGGGAAAGTAGTAGAAGCCCTGTGGCCTaGATGTCTCCTAAGCTAGTT +
Preference number: 2 (lower is better)
Translates to: LNLLVPCGTRWQGERESSRSPVA*MSPKLV
Trigger: AACTAGCTTAGGAGACATGCAGGCCACAGGGCTTCT...ACTACTTTCCCTCTCGCCCTGCCACCTAGTTCCACATGGAACCAACAAGTTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
3UTR-3UTR GCA 90 bp CACGTCACATGGTCAAAGTCTCCTCATTTCAGCCAGTCTCAACACAAAACACCCTGCATTCATACACGGTaGCCTGCTGGGGCTAGACTG +
Preference number: 2 (lower is better)
Translates to: HVTWSKSPHFSQSQHKTPCIHTR*PAGARL
Trigger: CAGTCTAGCCCCAGCAGGGCACCGTGTATGAATGCA...GGGTGTTTTGTGTTGAGACTGGCTGAAATGAGGAGACTTTGACCATGTGACGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
3UTR-3UTR CCA 90 bp AAGTCTCCTCATTTCAGCCAGTCTCAACACAAAACACCCAACAGGGATGCACTCTGCCTAGAAGCCCTGTaGCCTGCATGTCTCCTAAGC +
Preference number: 2 (lower is better)
Translates to: KSPHFSQSQHKTPNRDALCLEAL*PACLLS
Trigger: GCTTAGGAGACATGCAGGCCACAGGGCTTCTAGGCA...GAGTGCATCCCTGTTGGGTGTTTTGTGTTGAGACTGGCTGAAATGAGGAGACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
3UTR-3UTR CCA 90 bp AAGTCTCCTCATTTCAGCCAGTCTCAACACAAAACACCCAACAGGGATGCACTCCCTACTCAGGACTGCTaGCTAGCCATACTGAGCAGG +
Preference number: 2 (lower is better)
Translates to: KSPHFSQSQHKTPNRDALPTQDC*LAILSR
Trigger: CCTGCTCAGTATGGCTAGCCAGCAGTCCTGAGTAGG...GAGTGCATCCCTGTTGGGTGTTTTGTGTTGAGACTGGCTGAAATGAGGAGACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
3UTR-3UTR CCA 90 bp GCCAGTCTCAACACAAAACACCCAACAGGGATGCACTCAACTTGTTGGTTCCATAGACAGTGGGAGTCCTaGACTCCTACTCAGGACTGC +
Preference number: 2 (lower is better)
Translates to: ASLNTKHPTGMHSTCWFHRQWES*TPTQDC
Trigger: GCAGTCCTGAGTAGGAGTCCAGGACTCCCACTGTCT...ATGGAACCAACAAGTTGAGTGCATCCCTGTTGGGTGTTTTGTGTTGAGACTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
3UTR-3UTR CCA 90 bp CACGTCACATGGTCAAAGTCTCCTCATTTCAGCCAGTCTCAACACAAAACACCCTCATCCCAGCATCCATaGGGATACCCCATCCCTTCC +
Preference number: 2 (lower is better)
Translates to: HVTWSKSPHFSQSQHKTPSSQHP*GYPIPS
Trigger: GGAAGGGATGGGGTATCCCCATGGATGCTGGGATGA...GGGTGTTTTGTGTTGAGACTGGCTGAAATGAGGAGACTTTGACCATGTGACGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
3UTR-3UTR TCA 90 bp CACGTCACATGGTCAAAGTCTCCTCATTTCAGCCAGTCTCAACACAAAACACCCAGTGAGGGTGAAGGGTaGATGGGTTCAGAGGCAGAT +
Preference number: 2 (lower is better)
Translates to: HVTWSKSPHFSQSQHKTPSEGEG*MGSEAD
Trigger: ATCTGCCTCTGAACCCATTCACCCTTCACCCTCACT...GGGTGTTTTGTGTTGAGACTGGCTGAAATGAGGAGACTTTGACCATGTGACGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
3UTR-3UTR TCA 90 bp CTCAACTTGTTGGTTCCATGTGGAACTAGGTGGCAGGGCGAGAGGGAAAGTAGTAAAGCAACTAGGTTCTaGAGGAGAACTTGGGAGAGG +
Preference number: 2 (lower is better)
Translates to: LNLLVPCGTRWQGERESSKATRF*RRTWER
Trigger: CCTCTCCCAAGTTCTCCTTCAGAACCTAGTTGCTTT...ACTACTTTCCCTCTCGCCCTGCCACCTAGTTCCACATGGAACCAACAAGTTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
3UTR-3UTR CCA 90 bp GAATGCAGAGTTTTCTCCAAGCTTCAGCTTGGCTGTGAGGCCTGGAAACCTAGATGGATGATTAGATGCTaGGTATGGGGACCAGGAGTG +
Preference number: 2 (lower is better)
Translates to: ECRVFSKLQLGCEAWKPRWMIRC*VWGPGV
Trigger: CACTCCTGGTCCCCATACCCAGCATCTAATCATCCA...TCTAGGTTTCCAGGCCTCACAGCCAAGCTGAAGCTTGGAGAAAACTCTGCATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
3UTR-3UTR CCA 90 bp CTCAACTTGTTGGTTCCATGTGGAACTAGGTGGCAGGGCGAGAGGGAAAGTAGTGTGAGACATGTAAGGTaGGAGTTGAAGGTGGGGAAT +
Preference number: 2 (lower is better)
Translates to: LNLLVPCGTRWQGERESSVRHVR*ELKVGN
Trigger: ATTCCCCACCTTCAACTCCCACCTTACATGTCTCAC...ACTACTTTCCCTCTCGCCCTGCCACCTAGTTCCACATGGAACCAACAAGTTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
3UTR CAA 90 bp ACATACACAGGCATGCCACATGACCCAGTTGAGGTGGTTGTCTCCTaGAGTCTGTTGACACGTCACATGGTCAAAGTCTCCTCATTTCAG +
Preference number: 2 (lower is better)
Translates to: TYTGMPHDPVEVVVS*SLLTRHMVKVSSFQ
Trigger: CTGAAATGAGGAGACTTTGACCATGTGACGTGTCAACAGACTCAAGGAGACAACCACCTCAACTGGGTCATGTGGCATGCCTGTGTATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
3UTR-3UTR TCA 90 bp GCCAGTCTCAACACAAAACACCCAACAGGGATGCACTCAACTTGTTGGTTCCATCTAAAAGCAAAACCCTaGGCCCTTACTGGAGGGCAA +
Preference number: 2 (lower is better)
Translates to: ASLNTKHPTGMHSTCWFHLKAKP*ALTGGQ
Trigger: TTGCCCTCCAGTAAGGGCTCAGGGTTTTGCTTTTAG...ATGGAACCAACAAGTTGAGTGCATCCCTGTTGGGTGTTTTGTGTTGAGACTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
3UTR-3UTR TCA 90 bp AACACAAAACACCCAACAGGGATGCACTCAACTTGTTGGTTCCATGTGGAACTAAGGCAAGGTGAAGACTaGGCTGTCAGCCTTGGGATG +
Preference number: 2 (lower is better)
Translates to: NTKHPTGMHSTCWFHVELRQGED*AVSLGM
Trigger: CATCCCAAGGCTGACAGCTCAGTCTTCACCTTGCCT...TAGTTCCACATGGAACCAACAAGTTGAGTGCATCCCTGTTGGGTGTTTTGTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
3UTR-3UTR TCA 90 bp ATTCATACACGGTGCCCTGCTGGGGCTAGACTGGCAAAGGCTGGAAAGACACCCAGGCCTTTTAAAATTTaGGCCAAATGCCCTATAACT +
Preference number: 2 (lower is better)
Translates to: IHTRCPAGARLAKAGKTPRPFKI*AKCPIT
Trigger: AGTTATAGGGCATTTGGCTCAAATTTTAAAAGGCCT...GGGTGTCTTTCCAGCCTTTGCCAGTCTAGCCCCAGCAGGGCACCGTGTATGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
3UTR-3UTR TCA 90 bp CTCAACTTGTTGGTTCCATGTGGAACTAGGTGGCAGGGCGAGAGGGAAAGTAGTAGACTAGCAGGAGACTaGGTAGTGTTGGTTCTTAGA +
Preference number: 2 (lower is better)
Translates to: LNLLVPCGTRWQGERESSRLAGD*VVLVLR
Trigger: TCTAAGAACCAACACTACTCAGTCTCCTGCTAGTCT...ACTACTTTCCCTCTCGCCCTGCCACCTAGTTCCACATGGAACCAACAAGTTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
3UTR-3UTR TCA 90 bp AAGTCTCCTCATTTCAGCCAGTCTCAACACAAAACACCCAACAGGGATGCACTCCAGTATGACAAGGGCTaGTGCTTCAGGAGTCAGACT +
Preference number: 2 (lower is better)
Translates to: KSPHFSQSQHKTPNRDALQYDKG*CFRSQT
Trigger: AGTCTGACTCCTGAAGCATCAGCCCTTGTCATACTG...GAGTGCATCCCTGTTGGGTGTTTTGTGTTGAGACTGGCTGAAATGAGGAGACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
3UTR-3UTR TCA 90 bp CACGTCACATGGTCAAAGTCTCCTCATTTCAGCCAGTCTCAACACAAAACACCCGAAGCATGCTCAAGGTaGAAGGCACGTACACAGTCA +
Preference number: 2 (lower is better)
Translates to: HVTWSKSPHFSQSQHKTPEACSR*KARTQS
Trigger: TGACTGTGTACGTGCCTTTCACCTTGAGCATGCTTC...GGGTGTTTTGTGTTGAGACTGGCTGAAATGAGGAGACTTTGACCATGTGACGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
3UTR-3UTR GCA 90 bp GGTGGTTGTCTCCTTGAGTCTGTTGACACGTCACATGGTCAAAGTCTCCTCATTGCATGGATGATTAGATaGTGGGTATGGGGACCAGGA +
Preference number: 2 (lower is better)
Translates to: GGCLLESVDTSHGQSLLIAWMIR*WVWGPG
Trigger: TCCTGGTCCCCATACCCAGCATCTAATCATCCATGC...AATGAGGAGACTTTGACCATGTGACGTGTCAACAGACTCAAGGAGACAACCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
3UTR-3UTR GCA 90 bp AAGTCTCCTCATTTCAGCCAGTCTCAACACAAAACACCCAACAGGGATGCACTCATCCCAAGAGGCTGTTaGTGGTGTCTGAGCCCAAAA +
Preference number: 2 (lower is better)
Translates to: KSPHFSQSQHKTPNRDALIPRGC*WCLSPK
Trigger: TTTTGGGCTCAGACACCAGCAACAGCCTCTTGGGAT...GAGTGCATCCCTGTTGGGTGTTTTGTGTTGAGACTGGCTGAAATGAGGAGACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
3UTR-3UTR GCA 90 bp GGTGGTTGTCTCCTTGAGTCTGTTGACACGTCACATGGTCAAAGTCTCCTCATTGGGCTATGGTGTGTCTaGATTCAGTCCCCTCACATA +
Preference number: 2 (lower is better)
Translates to: GGCLLESVDTSHGQSLLIGLWCV*IQSPHI
Trigger: TATGTGAGGGGACTGAATGCAGACACACCATAGCCC...AATGAGGAGACTTTGACCATGTGACGTGTCAACAGACTCAAGGAGACAACCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
3UTR-3UTR CCA 90 bp AAGTCTCCTCATTTCAGCCAGTCTCAACACAAAACACCCAACAGGGATGCACTCTATAGAAAAGGGAAGTaGGGGCAGACTCCAGGCTTC +
Preference number: 2 (lower is better)
Translates to: KSPHFSQSQHKTPNRDALYRKGK*GQTPGF
Trigger: GAAGCCTGGAGTCTGCCCCCACTTCCCTTTTCTATA...GAGTGCATCCCTGTTGGGTGTTTTGTGTTGAGACTGGCTGAAATGAGGAGACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
3UTR-3UTR CCA 90 bp GGTGGTTGTCTCCTTGAGTCTGTTGACACGTCACATGGTCAAAGTCTCCTCATTTGCAGATTGAGACAGTaGGAGTCCTGGACTCCTACT +
Preference number: 2 (lower is better)
Translates to: GGCLLESVDTSHGQSLLICRLRQ*ESWTPT
Trigger: AGTAGGAGTCCAGGACTCCCACTGTCTCAATCTGCA...AATGAGGAGACTTTGACCATGTGACGTGTCAACAGACTCAAGGAGACAACCACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
3UTR-3UTR TCA 90 bp GCCAGTCTCAACACAAAACACCCAACAGGGATGCACTCAACTTGTTGGTTCCATAAAGCAACTAGGTTCTaGAGGAGAACTTGGGAGAGG +
Preference number: 2 (lower is better)
Translates to: ASLNTKHPTGMHSTCWFHKATRF*RRTWER
Trigger: CCTCTCCCAAGTTCTCCTTCAGAACCTAGTTGCTTT...ATGGAACCAACAAGTTGAGTGCATCCCTGTTGGGTGTTTTGTGTTGAGACTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
3UTR-3UTR TCA 90 bp CACGTCACATGGTCAAAGTCTCCTCATTTCAGCCAGTCTCAACACAAAACACCCGGTTGCATAGGACTTTaGACTCTGGTTCCCTCATGT +
Preference number: 2 (lower is better)
Translates to: HVTWSKSPHFSQSQHKTPGCIGL*TLVPSC
Trigger: ACATGAGGGAACCAGAGTTCAAAGTCCTATGCAACC...GGGTGTTTTGTGTTGAGACTGGCTGAAATGAGGAGACTTTGACCATGTGACGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
3UTR-3UTR TCA 90 bp GCCAGTCTCAACACAAAACACCCAACAGGGATGCACTCAACTTGTTGGTTCCATCTGGAAGTCACTGTTTaGTGTAACTGGGACTCACTC +
Preference number: 2 (lower is better)
Translates to: ASLNTKHPTGMHSTCWFHLEVTV*CNWDSL
Trigger: GAGTGAGTCCCAGTTACATCAAACAGTGACTTCCAG...ATGGAACCAACAAGTTGAGTGCATCCCTGTTGGGTGTTTTGTGTTGAGACTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
3UTR-3UTR CCA 90 bp CACGTCACATGGTCAAAGTCTCCTCATTTCAGCCAGTCTCAACACAAAACACCCGTGAGACATGTAAGGTaGGAGTTGAAGGTGGGGAAT +
Preference number: 2 (lower is better)
Translates to: HVTWSKSPHFSQSQHKTPVRHVR*ELKVGN
Trigger: ATTCCCCACCTTCAACTCCCACCTTACATGTCTCAC...GGGTGTTTTGTGTTGAGACTGGCTGAAATGAGGAGACTTTGACCATGTGACGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
3UTR-3UTR CCA 90 bp ATCAATCAAAACAGACTCTCTAACCCCCTCCTAAGGTTGCATAGGACTTTGAACGATGGCTTCACCCCATaGTGTGTCCTCCAGCATCAC +
Preference number: 2 (lower is better)
Translates to: INQNRLSNPLLRLHRTLNDGFTP*CVLQHH
Trigger: GTGATGCTGGAGGACACACCATGGGGTGAAGCCATC...GTTCAAAGTCCTATGCAACCTTAGGAGGGGGTTAGAGAGTCTGTTTTGATTGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
3UTR-3UTR TCA 90 bp TACTCACAAATTGATACAAACTCCTCTAGGGCCTCAGAAAACATCAATCAAAACCACTGCTCTGCACGCTaGCCTAGGGTGTGTGCCCTT +
Preference number: 2 (lower is better)
Translates to: YSQIDTNSSRASENINQNHCSAR*PRVCAL
Trigger: AAGGGCACACACCCTAGGTCAGCGTGCAGAGCAGTG...GTTTTGATTGATGTTTTCTGAGGCCCTAGAGGAGTTTGTATCAATTTGTGAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
3UTR-3UTR TCA 90 bp GCCAGTCTCAACACAAAACACCCAACAGGGATGCACTCAACTTGTTGGTTCCATAGACTAGCAGGAGACTaGGTAGTGTTGGTTCTTAGA +
Preference number: 2 (lower is better)
Translates to: ASLNTKHPTGMHSTCWFHRLAGD*VVLVLR
Trigger: TCTAAGAACCAACACTACTCAGTCTCCTGCTAGTCT...ATGGAACCAACAAGTTGAGTGCATCCCTGTTGGGTGTTTTGTGTTGAGACTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
3UTR-3UTR TCA 90 bp AACACAAAACACCCAACAGGGATGCACTCAACTTGTTGGTTCCATGTGGAACTACAGTATGACAAGGGCTaGTGCTTCAGGAGTCAGACT +
Preference number: 2 (lower is better)
Translates to: NTKHPTGMHSTCWFHVELQYDKG*CFRSQT
Trigger: AGTCTGACTCCTGAAGCATCAGCCCTTGTCATACTG...TAGTTCCACATGGAACCAACAAGTTGAGTGCATCCCTGTTGGGTGTTTTGTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
3UTR-3UTR TCA 90 bp AACACAAAACACCCAACAGGGATGCACTCAACTTGTTGGTTCCATGTGGAACTAGAAGCATGCTCAAGGTaGAAGGCACGTACACAGTCA +
Preference number: 2 (lower is better)
Translates to: NTKHPTGMHSTCWFHVELEACSR*KARTQS
Trigger: TGACTGTGTACGTGCCTTTCACCTTGAGCATGCTTC...TAGTTCCACATGGAACCAACAAGTTGAGTGCATCCCTGTTGGGTGTTTTGTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
3UTR-3UTR GCA 90 bp AACACAAAACACCCAACAGGGATGCACTCAACTTGTTGGTTCCATGTGGAACTAGCATGGATGATTAGATaGTGGGTATGGGGACCAGGA +
Preference number: 2 (lower is better)
Translates to: NTKHPTGMHSTCWFHVELAWMIR*WVWGPG
Trigger: TCCTGGTCCCCATACCCAGCATCTAATCATCCATGC...TAGTTCCACATGGAACCAACAAGTTGAGTGCATCCCTGTTGGGTGTTTTGTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
3UTR-3UTR GCA 90 bp GCCAGTCTCAACACAAAACACCCAACAGGGATGCACTCAACTTGTTGGTTCCATAAAACAGCACCAAACTaGATTCATACACGGTGCCCT +
Preference number: 2 (lower is better)
Translates to: ASLNTKHPTGMHSTCWFHKTAPN*IHTRCP
Trigger: AGGGCACCGTGTATGAATGCAGTTTGGTGCTGTTTT...ATGGAACCAACAAGTTGAGTGCATCCCTGTTGGGTGTTTTGTGTTGAGACTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
3UTR-3UTR CCA 90 bp AACACAAAACACCCAACAGGGATGCACTCAACTTGTTGGTTCCATGTGGAACTAAGTAGAAGGGGGCTATaGTGTGTCTGCATTCAGTCC +
Preference number: 2 (lower is better)
Translates to: NTKHPTGMHSTCWFHVELSRRGL*CVCIQS
Trigger: GGACTGAATGCAGACACACCATAGCCCCCTTCTACT...TAGTTCCACATGGAACCAACAAGTTGAGTGCATCCCTGTTGGGTGTTTTGTGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
3UTR-3UTR GCA 90 bp ATCAATCAAAACAGACTCTCTAACCCCCTCCTAAGGTTGCATAGGACTTTGAACAGAAGCCCTGTGGCCTaGATGTCTCCTAAGCTAGTT +
Preference number: 2 (lower is better)
Translates to: INQNRLSNPLLRLHRTLNRSPVA*MSPKLV
Trigger: AACTAGCTTAGGAGACATGCAGGCCACAGGGCTTCT...GTTCAAAGTCCTATGCAACCTTAGGAGGGGGTTAGAGAGTCTGTTTTGATTGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
3UTR-3UTR GCA 90 bp AAGTCTCCTCATTTCAGCCAGTCTCAACACAAAACACCCAACAGGGATGCACTCTGGATAGGAACAATTTaGAGATTGAGACAGTGGGAG +
Preference number: 2 (lower is better)
Translates to: KSPHFSQSQHKTPNRDALWIGTI*RLRQWE
Trigger: CTCCCACTGTCTCAATCTGCAAATTGTTCCTATCCA...GAGTGCATCCCTGTTGGGTGTTTTGTGTTGAGACTGGCTGAAATGAGGAGACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
3UTR-3UTR CCA 90 bp TACTCACAAATTGATACAAACTCCTCTAGGGCCTCAGAAAACATCAATCAAAACCCAGAGGTAGAGGACTaGAGGGCAAGGGTGAAAGGG +
Preference number: 2 (lower is better)
Translates to: YSQIDTNSSRASENINQNPEVED*RARVKG
Trigger: CCCTTTCACCCTTGCCCTCCAGTCCTCTACCTCTGG...GTTTTGATTGATGTTTTCTGAGGCCCTAGAGGAGTTTGTATCAATTTGTGAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
3UTR-3UTR CCA 90 bp AATACTCACAAATTGATACAAACTCCTCTAGGGCCTCAGAAAACATCAATCAAACTACCTGGTCAGAGCTaGGCTCAGGGTCCCCACCAT +
Preference number: 2 (lower is better)
Translates to: NTHKLIQTPLGPQKTSIKLPGQS*AQGPHH
Trigger: ATGGTGGGGACCCTGAGCCCAGCTCTGACCAGGTAG...TTTGATTGATGTTTTCTGAGGCCCTAGAGGAGTTTGTATCAATTTGTGAGTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
3UTR-3UTR TCA 90 bp AATACTCACAAATTGATACAAACTCCTCTAGGGCCTCAGAAAACATCAATCAAAACCCTAGGCTGGCTGTaGAGTGCCCAAGTGGTAGCT +
Preference number: 2 (lower is better)
Translates to: NTHKLIQTPLGPQKTSIKTLGWL*SAQVVA
Trigger: AGCTACCACTTGGGCACTTCACAGCCAGCCTAGGGT...TTTGATTGATGTTTTCTGAGGCCCTAGAGGAGTTTGTATCAATTTGTGAGTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
3UTR-3UTR GCA 90 bp AACACAAAACACCCAACAGGGATGCACTCAACTTGTTGGTTCCATGTGGAACTATTGCCCTCATGGGAATaGAGAGTTTTCTCCAAGCTT +
Preference number: 2 (lower is better)
Translates to: NTKHPTGMHSTCWFHVELLPSWE*RVFSKL
Trigger: AAGCTTGGAGAAAACTCTGCATTCCCATGAGGGCAA...TAGTTCCACATGGAACCAACAAGTTGAGTGCATCCCTGTTGGGTGTTTTGTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
3UTR-3UTR TCA 90 bp CACGTCACATGGTCAAAGTCTCCTCATTTCAGCCAGTCTCAACACAAAACACCCAGGCCTTTTAAAATTTaGGCCAAATGCCCTATAACT +
Preference number: 2 (lower is better)
Translates to: HVTWSKSPHFSQSQHKTPRPFKI*AKCPIT
Trigger: AGTTATAGGGCATTTGGCTCAAATTTTAAAAGGCCT...GGGTGTTTTGTGTTGAGACTGGCTGAAATGAGGAGACTTTGACCATGTGACGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
3UTR-3UTR GCA 90 bp TACTCACAAATTGATACAAACTCCTCTAGGGCCTCAGAAAACATCAATCAAAACACTCCTACTCAGGACTaGTGGCTAGCCATACTGAGC +
Preference number: 2 (lower is better)
Translates to: YSQIDTNSSRASENINQNTPTQD*WLAILS
Trigger: GCTCAGTATGGCTAGCCAGCAGTCCTGAGTAGGAGT...GTTTTGATTGATGTTTTCTGAGGCCCTAGAGGAGTTTGTATCAATTTGTGAGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
3UTR-3UTR GCA 90 bp AACACAAAACACCCAACAGGGATGCACTCAACTTGTTGGTTCCATGTGGAACTATGGATAGGAACAATTTaGAGATTGAGACAGTGGGAG +
Preference number: 2 (lower is better)
Translates to: NTKHPTGMHSTCWFHVELWIGTI*RLRQWE
Trigger: CTCCCACTGTCTCAATCTGCAAATTGTTCCTATCCA...TAGTTCCACATGGAACCAACAAGTTGAGTGCATCCCTGTTGGGTGTTTTGTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
3UTR-3UTR CCA 90 bp AATACTCACAAATTGATACAAACTCCTCTAGGGCCTCAGAAAACATCAATCAAACTGTCAGCCTTGGGATaGCTTCACCCCATGGTGTGT +
Preference number: 2 (lower is better)
Translates to: NTHKLIQTPLGPQKTSIKLSALG*LHPMVC
Trigger: ACACACCATGGGGTGAAGCCATCCCAAGGCTGACAG...TTTGATTGATGTTTTCTGAGGCCCTAGAGGAGTTTGTATCAATTTGTGAGTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
3UTR-3UTR CCA 90 bp ATCAATCAAAACAGACTCTCTAACCCCCTCCTAAGGTTGCATAGGACTTTGAACATTTGGCTTATTCCCTaGAATAGGAGACCCCATCAG +
Preference number: 2 (lower is better)
Translates to: INQNRLSNPLLRLHRTLNIWLIP*NRRPHQ
Trigger: CTGATGGGGTCTCCTATTCCAGGGAATAAGCCAAAT...GTTCAAAGTCCTATGCAACCTTAGGAGGGGGTTAGAGAGTCTGTTTTGATTGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
3UTR-3UTR CCA 90 bp AATACTCACAAATTGATACAAACTCCTCTAGGGCCTCAGAAAACATCAATCAAACCACCAGAAGGATCATaGGCACCACACAGGACTGAG +
Preference number: 2 (lower is better)
Translates to: NTHKLIQTPLGPQKTSIKPPEGS*APHRTE
Trigger: CTCAGTCCTGTGTGGTGCCCATGATCCTTCTGGTGG...TTTGATTGATGTTTTCTGAGGCCCTAGAGGAGTTTGTATCAATTTGTGAGTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
3UTR-3UTR CCA 90 bp TACTCACAAATTGATACAAACTCCTCTAGGGCCTCAGAAAACATCAATCAAAACTATAGAAAAGGGAAGTaGGGGCAGACTCCAGGCTTC +
Preference number: 2 (lower is better)
Translates to: YSQIDTNSSRASENINQNYRKGK*GQTPGF
Trigger: GAAGCCTGGAGTCTGCCCCCACTTCCCTTTTCTATA...GTTTTGATTGATGTTTTCTGAGGCCCTAGAGGAGTTTGTATCAATTTGTGAGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
3UTR-3UTR CCA 90 bp TACTCACAAATTGATACAAACTCCTCTAGGGCCTCAGAAAACATCAATCAAAACCTGCCTTTGCCCTCATaGGAATGCAGAGTTTTCTCC +
Preference number: 2 (lower is better)
Translates to: YSQIDTNSSRASENINQNLPLPS*ECRVFS
Trigger: GGAGAAAACTCTGCATTCCCATGAGGGCAAAGGCAG...GTTTTGATTGATGTTTTCTGAGGCCCTAGAGGAGTTTGTATCAATTTGTGAGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
3UTR-3UTR CCA 90 bp TACTCACAAATTGATACAAACTCCTCTAGGGCCTCAGAAAACATCAATCAAAACGTAGGCAAGAAGGGTTaGAGGGAGATTCAGCTCTTG +
Preference number: 2 (lower is better)
Translates to: YSQIDTNSSRASENINQNVGKKG*REIQLL
Trigger: CAAGAGCTGAATCTCCCTCCAACCCTTCTTGCCTAC...GTTTTGATTGATGTTTTCTGAGGCCCTAGAGGAGTTTGTATCAATTTGTGAGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
3UTR-3UTR CCA 90 bp TACTCACAAATTGATACAAACTCCTCTAGGGCCTCAGAAAACATCAATCAAAACAGGGTGAAGGGTGAATaGGTTCAGAGGCAGATTAGA +
Preference number: 2 (lower is better)
Translates to: YSQIDTNSSRASENINQNRVKGE*VQRQIR
Trigger: TCTAATCTGCCTCTGAACCCATTCACCCTTCACCCT...GTTTTGATTGATGTTTTCTGAGGCCCTAGAGGAGTTTGTATCAATTTGTGAGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
3UTR-3UTR CCA 90 bp AATACTCACAAATTGATACAAACTCCTCTAGGGCCTCAGAAAACATCAATCAAATGGATGATTAGATGCTaGGTATGGGGACCAGGAGTG +
Preference number: 2 (lower is better)
Translates to: NTHKLIQTPLGPQKTSIKWMIRC*VWGPGV
Trigger: CACTCCTGGTCCCCATACCCAGCATCTAATCATCCA...TTTGATTGATGTTTTCTGAGGCCCTAGAGGAGTTTGTATCAATTTGTGAGTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
3UTR-3UTR CCA 90 bp AATACTCACAAATTGATACAAACTCCTCTAGGGCCTCAGAAAACATCAATCAAAGTAGGCAAGAAGGGTTaGAGGGAGATTCAGCTCTTG +
Preference number: 2 (lower is better)
Translates to: NTHKLIQTPLGPQKTSIKVGKKG*REIQLL
Trigger: CAAGAGCTGAATCTCCCTCCAACCCTTCTTGCCTAC...TTTGATTGATGTTTTCTGAGGCCCTAGAGGAGTTTGTATCAATTTGTGAGTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
3UTR-3UTR CCA 90 bp AACACAAAACACCCAACAGGGATGCACTCAACTTGTTGGTTCCATGTGGAACTATTACTGGGGAATAACTaGAAGTCACTGTTTGATGTA +
Preference number: 2 (lower is better)
Translates to: NTKHPTGMHSTCWFHVELLLGNN*KSLFDV
Trigger: TACATCAAACAGTGACTTCCAGTTATTCCCCAGTAA...TAGTTCCACATGGAACCAACAAGTTGAGTGCATCCCTGTTGGGTGTTTTGTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
3UTR-3UTR TCA 90 bp TACTCACAAATTGATACAAACTCCTCTAGGGCCTCAGAAAACATCAATCAAAACACAGTCAATACAGTATaGCAAGGGCTGATGCTTCAG +
Preference number: 2 (lower is better)
Translates to: YSQIDTNSSRASENINQNTVNTV*QGLMLQ
Trigger: CTGAAGCATCAGCCCTTGTCATACTGTATTGACTGT...GTTTTGATTGATGTTTTCTGAGGCCCTAGAGGAGTTTGTATCAATTTGTGAGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
3UTR-3UTR GCA 90 bp TACTCACAAATTGATACAAACTCCTCTAGGGCCTCAGAAAACATCAATCAAAACTTGCCCTCATGGGAATaGAGAGTTTTCTCCAAGCTT +
Preference number: 2 (lower is better)
Translates to: YSQIDTNSSRASENINQNLPSWE*RVFSKL
Trigger: AAGCTTGGAGAAAACTCTGCATTCCCATGAGGGCAA...GTTTTGATTGATGTTTTCTGAGGCCCTAGAGGAGTTTGTATCAATTTGTGAGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
3UTR-3UTR GCA 90 bp AATACTCACAAATTGATACAAACTCCTCTAGGGCCTCAGAAAACATCAATCAAATCAGATTTCAGGGCCTaGAGAAGGGTGGATTATAGA +
Preference number: 2 (lower is better)
Translates to: NTHKLIQTPLGPQKTSIKSDFRA*RRVDYR
Trigger: TCTATAATCCACCCTTCTGCAGGCCCTGAAATCTGA...TTTGATTGATGTTTTCTGAGGCCCTAGAGGAGTTTGTATCAATTTGTGAGTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
3UTR-3UTR GCA 90 bp ATCAATCAAAACAGACTCTCTAACCCCCTCCTAAGGTTGCATAGGACTTTGAACATTGCCACACTCAAATaGTACAGAATCTATAGGAAA +
Preference number: 2 (lower is better)
Translates to: INQNRLSNPLLRLHRTLNIATLK*YRIYRK
Trigger: TTTCCTATAGATTCTGTAGCATTTGAGTGTGGCAAT...GTTCAAAGTCCTATGCAACCTTAGGAGGGGGTTAGAGAGTCTGTTTTGATTGAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
3UTR GCA 72 bp CTGGGAGCAGGGTTTGGCCTCTCTGAGCAAGCACAGTaGACACTCCCTTGGTGCCCTGCTCCCTGCAGCTTC +
Preference number: 3 (lower is better)
Translates to: LGAGFGLSEQAQ*TLPWCPAPCSF
Trigger: GAAGCTGCAGGGAGCAGGGCACCAAGGGAGTGTGCACTGTGCTTGCTCAGAGAGGCCAAACCCTGCTCCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
3UTR GCA 72 bp GGCCTCTCTGAGCAAGCACAGTGCACACTCCCTTGGTaGCCTGCTCCCTGCAGCTTCTCAACGTGTCTGTCC +
Preference number: 3 (lower is better)
Translates to: GLSEQAQCTLPW*PAPCSFSTCLS
Trigger: GGACAGACACGTTGAGAAGCTGCAGGGAGCAGGGCACCAAGGGAGTGTGCACTGTGCTTGCTCAGAGAGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
3UTR GCA 72 bp GCTCTGCACGCTGACCTAGGGTGTGTGCCCTTTCCCTaGCTAGAAGCCCTGTGGCCTGCATGTCTCCTAAGC +
Preference number: 3 (lower is better)
Translates to: ALHADLGCVPFP*LEALWPACLLS
Trigger: GCTTAGGAGACATGCAGGCCACAGGGCTTCTAGGCAGGGAAAGGGCACACACCCTAGGTCAGCGTGCAGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
3UTR TCA 72 bp CCATGGTGTGTCCTCCAGCATCACTGCTCTGCACGCTaGCCTAGGGTGTGTGCCCTTTCCCTGCCTAGAAGC +
Preference number: 3 (lower is better)
Translates to: PWCVLQHHCSAR*PRVCALSLPRS
Trigger: GCTTCTAGGCAGGGAAAGGGCACACACCCTAGGTCAGCGTGCAGAGCAGTGATGCTGGAGGACACACCATGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
3UTR GCA 72 bp CAAGCACAGTGCACACTCCCTTGGTGCCCTGCTCCCTaGAGCTTCTCAACGTGTCTGTCCTGTCCGCATCTC +
Preference number: 3 (lower is better)
Translates to: QAQCTLPWCPAP*SFSTCLSCPHL
Trigger: GAGATGCGGACAGGACAGACACGTTGAGAAGCTGCAGGGAGCAGGGCACCAAGGGAGTGTGCACTGTGCTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
3UTR-3UTR CAA 90 bp ATTCATACACGGTGCCCTGCTGGGGCTAGACTGGCAAAGGCTGGAAAGACACCCGGAGGGCAGCTGCCTTaGCCCTCATGGGAATGCAGA +
Preference number: 3 (lower is better)
Translates to: IHTRCPAGARLAKAGKTPGGQLP*PSWECR
Trigger: TCTGCATTCCCATGAGGGCAAAGGCAGCTGCCCTCC...GGGTGTCTTTCCAGCCTTTGCCAGTCTAGCCCCAGCAGGGCACCGTGTATGAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
3UTR-3UTR CAA 90 bp ATTCATACACGGTGCCCTGCTGGGGCTAGACTGGCAAAGGCTGGAAAGACACCCACTGAGCTGTCAGCCTaGGGATGGCTTCACCCCATG +
Preference number: 3 (lower is better)
Translates to: IHTRCPAGARLAKAGKTPTELSA*GWLHPM
Trigger: CATGGGGTGAAGCCATCCCAAGGCTGACAGCTCAGT...GGGTGTCTTTCCAGCCTTTGCCAGTCTAGCCCCAGCAGGGCACCGTGTATGAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
3UTR CCA 72 bp TTTGGCCTCTCTGAGCAAGCACAGTGCACACTCCCTTaGTGCCCTGCTCCCTGCAGCTTCTCAACGTGTCTG +
Preference number: 3 (lower is better)
Translates to: FGLSEQAQCTLP*CPAPCSFSTCL
Trigger: CAGACACGTTGAGAAGCTGCAGGGAGCAGGGCACCAAGGGAGTGTGCACTGTGCTTGCTCAGAGAGGCCAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
3UTR CCA 72 bp GTGGCCTGCATGTCTCCTAAGCTAGTTCTAGCACCTTaGGCTTGTGAACAGACGGCCAGGATGGTAGGGCCT +
Preference number: 3 (lower is better)
Translates to: VACMSPKLVLAP*ACEQTARMVGP
Trigger: AGGCCCTACCATCCTGGCCGTCTGTTCACAAGCCCAAGGTGCTAGAACTAGCTTAGGAGACATGCAGGCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
3UTR TCA 72 bp GGGTGTGAAATACAAGGCCAGAGGCAAGGTGAAGACTaGGCTGTCAGCCTTGGGATGGCTTCACCCCATGGT +
Preference number: 3 (lower is better)
Translates to: GCEIQGQRQGED*AVSLGMASPHG
Trigger: ACCATGGGGTGAAGCCATCCCAAGGCTGACAGCTCAGTCTTCACCTTGCCTCTGGCCTTGTATTTCACACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
3UTR-3UTR CAA 90 bp AAGTCTCCTCATTTCAGCCAGTCTCAACACAAAACACCCAACAGGGATGCACTCACAGTGCACACTCCCTaGGTGCCCTGCTCCCTGCAG +
Preference number: 3 (lower is better)
Translates to: KSPHFSQSQHKTPNRDALTVHTP*VPCSLQ
Trigger: CTGCAGGGAGCAGGGCACCAAGGGAGTGTGCACTGT...GAGTGCATCCCTGTTGGGTGTTTTGTGTTGAGACTGGCTGAAATGAGGAGACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
3UTR TCA 72 bp CAACTCAGGGCATCCCAAGAGGCTGTTGCTGGTGTCTaGGCCCAAAATTCAGTCTCACCACAAGAAGGGGAG +
Preference number: 3 (lower is better)
Translates to: QLRASQEAVAGV*AQNSVSPQEGE
Trigger: CTCCCCTTCTTGTGGTGAGACTGAATTTTGGGCTCAGACACCAGCAACAGCCTCTTGGGATGCCCTGAGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
3UTR-3UTR CAA 90 bp GCCAGTCTCAACACAAAACACCCAACAGGGATGCACTCAACTTGTTGGTTCCATGGAGGGCAGCTGCCTTaGCCCTCATGGGAATGCAGA +
Preference number: 3 (lower is better)
Translates to: ASLNTKHPTGMHSTCWFHGGQLP*PSWECR
Trigger: TCTGCATTCCCATGAGGGCAAAGGCAGCTGCCCTCC...ATGGAACCAACAAGTTGAGTGCATCCCTGTTGGGTGTTTTGTGTTGAGACTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
3UTR-3UTR CAA 90 bp ATTCATACACGGTGCCCTGCTGGGGCTAGACTGGCAAAGGCTGGAAAGACACCCCAAGCAGGTGAGAGATaGGGTTCTAGAATACAGGAG +
Preference number: 3 (lower is better)
Translates to: IHTRCPAGARLAKAGKTPQAGER*GSRIQE
Trigger: CTCCTGTATTCTAGAACCCAATCTCTCACCTGCTTG...GGGTGTCTTTCCAGCCTTTGCCAGTCTAGCCCCAGCAGGGCACCGTGTATGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
3UTR TCA 72 bp GGGCTAGACTGGCAAAGGCTGGAAAGACACCCAGCTTaGAGGAACCACTCAGACTTACTGGGGAATAACTGG +
Preference number: 3 (lower is better)
Translates to: GLDWQRLERHPA*RNHSDLLGNNW
Trigger: CCAGTTATTCCCCAGTAAGTCTGAGTGGTTCCTTCAAGCTGGGTGTCTTTCCAGCCTTTGCCAGTCTAGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
3UTR-3UTR CAA 90 bp CTCAACTTGTTGGTTCCATGTGGAACTAGGTGGCAGGGCGAGAGGGAAAGTAGTCAGGGTCCCCACCATTaGGTAGGGAATTACTGGGAA +
Preference number: 3 (lower is better)
Translates to: LNLLVPCGTRWQGERESSQGPHH*VGNYWE
Trigger: TTCCCAGTAATTCCCTACCAAATGGTGGGGACCCTG...ACTACTTTCCCTCTCGCCCTGCCACCTAGTTCCACATGGAACCAACAAGTTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
3UTR-3UTR CAA 90 bp AAGTCTCCTCATTTCAGCCAGTCTCAACACAAAACACCCAACAGGGATGCACTCACTGAGCTGTCAGCCTaGGGATGGCTTCACCCCATG +
Preference number: 3 (lower is better)
Translates to: KSPHFSQSQHKTPNRDALTELSA*GWLHPM
Trigger: CATGGGGTGAAGCCATCCCAAGGCTGACAGCTCAGT...GAGTGCATCCCTGTTGGGTGTTTTGTGTTGAGACTGGCTGAAATGAGGAGACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
3UTR-3UTR CAA 90 bp CTCAACTTGTTGGTTCCATGTGGAACTAGGTGGCAGGGCGAGAGGGAAAGTAGTATAGGTCAGAGCAAGTaGCTCAGAGGGTTCCAGGCA +
Preference number: 3 (lower is better)
Translates to: LNLLVPCGTRWQGERESSIGQSK*LRGFQA
Trigger: TGCCTGGAACCCTCTGAGCAACTTGCTCTGACCTAT...ACTACTTTCCCTCTCGCCCTGCCACCTAGTTCCACATGGAACCAACAAGTTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
3UTR-3UTR CAA 90 bp AACACAAAACACCCAACAGGGATGCACTCAACTTGTTGGTTCCATGTGGAACTACAGGATGGTAGGGCCTaGCCCAGCTTCTACTCGGGT +
Preference number: 3 (lower is better)
Translates to: NTKHPTGMHSTCWFHVELQDGRA*PSFYSG
Trigger: ACCCGAGTAGAAGCTGGGCAAGGCCCTACCATCCTG...TAGTTCCACATGGAACCAACAAGTTGAGTGCATCCCTGTTGGGTGTTTTGTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
3UTR-3UTR CAA 90 bp GCCAGTCTCAACACAAAACACCCAACAGGGATGCACTCAACTTGTTGGTTCCATCATCCCAAGAGGCTGTaGCTGGTGTCTGAGCCCAAA +
Preference number: 3 (lower is better)
Translates to: ASLNTKHPTGMHSTCWFHHPKRL*LVSEPK
Trigger: TTTGGGCTCAGACACCAGCAACAGCCTCTTGGGATG...ATGGAACCAACAAGTTGAGTGCATCCCTGTTGGGTGTTTTGTGTTGAGACTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
3UTR-3UTR CAA 90 bp CACGTCACATGGTCAAAGTCTCCTCATTTCAGCCAGTCTCAACACAAAACACCCTCTCCAAGCTTCAGCTaGGCTGTGAGGCCTGGAAAC +
Preference number: 3 (lower is better)
Translates to: HVTWSKSPHFSQSQHKTPSPSFS*AVRPGN
Trigger: GTTTCCAGGCCTCACAGCCAAGCTGAAGCTTGGAGA...GGGTGTTTTGTGTTGAGACTGGCTGAAATGAGGAGACTTTGACCATGTGACGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
3UTR-3UTR CAA 90 bp GGTGGTTGTCTCCTTGAGTCTGTTGACACGTCACATGGTCAAAGTCTCCTCATTTCTCCAAGCTTCAGCTaGGCTGTGAGGCCTGGAAAC +
Preference number: 3 (lower is better)
Translates to: GGCLLESVDTSHGQSLLISPSFS*AVRPGN
Trigger: GTTTCCAGGCCTCACAGCCAAGCTGAAGCTTGGAGA...AATGAGGAGACTTTGACCATGTGACGTGTCAACAGACTCAAGGAGACAACCACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
3UTR-3UTR CAA 90 bp GGTGGTTGTCTCCTTGAGTCTGTTGACACGTCACATGGTCAAAGTCTCCTCATTAGGGAGATTCAGCTCTaGGAGGTGCCGAAGACCCTA +
Preference number: 3 (lower is better)
Translates to: GGCLLESVDTSHGQSLLIREIQL*EVPKTL
Trigger: TAGGGTCTTCGGCACCTCCAAGAGCTGAATCTCCCT...AATGAGGAGACTTTGACCATGTGACGTGTCAACAGACTCAAGGAGACAACCACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
3UTR-3UTR CAA 90 bp CTCAACTTGTTGGTTCCATGTGGAACTAGGTGGCAGGGCGAGAGGGAAAGTAGTGGAAAGACACCCAGCTaGAAGGAACCACTCAGACTT +
Preference number: 3 (lower is better)
Translates to: LNLLVPCGTRWQGERESSGKTPS*KEPLRL
Trigger: AAGTCTGAGTGGTTCCTTCAAGCTGGGTGTCTTTCC...ACTACTTTCCCTCTCGCCCTGCCACCTAGTTCCACATGGAACCAACAAGTTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
3UTR GCA 72 bp TACTCTAAAACAGCACCAAACTGCATTCATACACGGTaGCCTGCTGGGGCTAGACTGGCAAAGGCTGGAAAG +
Preference number: 3 (lower is better)
Translates to: YSKTAPNCIHTR*PAGARLAKAGK
Trigger: CTTTCCAGCCTTTGCCAGTCTAGCCCCAGCAGGGCACCGTGTATGAATGCAGTTTGGTGCTGTTTTAGAGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
3UTR CCA 72 bp GGAGCAAGGCTGTCAACTACTGGGGCCCTAGTGGACTaGCGTGGGAGCTTTGATCCGTTTTTAGTGTTAATT +
Preference number: 3 (lower is better)
Translates to: GARLSTTGALVD*RGSFDPFLVLI
Trigger: AATTAACACTAAAAACGGATCAAAGCTCCCACGCCAGTCCACTAGGGCCCCAGTAGTTGACAGCCTTGCTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
3UTR-3UTR CAA 90 bp GCCAGTCTCAACACAAAACACCCAACAGGGATGCACTCAACTTGTTGGTTCCATCAGGGTCCCCACCATTaGGTAGGGAATTACTGGGAA +
Preference number: 3 (lower is better)
Translates to: ASLNTKHPTGMHSTCWFHQGPHH*VGNYWE
Trigger: TTCCCAGTAATTCCCTACCAAATGGTGGGGACCCTG...ATGGAACCAACAAGTTGAGTGCATCCCTGTTGGGTGTTTTGTGTTGAGACTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
3UTR-3UTR CAA 90 bp CTCAACTTGTTGGTTCCATGTGGAACTAGGTGGCAGGGCGAGAGGGAAAGTAGTAGGTTGCATAGGACTTaGAACTCTGGTTCCCTCATG +
Preference number: 3 (lower is better)
Translates to: LNLLVPCGTRWQGERESSRLHRT*NSGSLM
Trigger: CATGAGGGAACCAGAGTTCAAAGTCCTATGCAACCT...ACTACTTTCCCTCTCGCCCTGCCACCTAGTTCCACATGGAACCAACAAGTTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
3UTR-3UTR CAA 90 bp CACGTCACATGGTCAAAGTCTCCTCATTTCAGCCAGTCTCAACACAAAACACCCCTGGTGGGGTCCGTGTaGCACCTAAGACATTATAGG +
Preference number: 3 (lower is better)
Translates to: HVTWSKSPHFSQSQHKTPLVGSV*HLRHYR
Trigger: CCTATAATGTCTTAGGTGCAACACGGACCCCACCAG...GGGTGTTTTGTGTTGAGACTGGCTGAAATGAGGAGACTTTGACCATGTGACGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
3UTR-3UTR CAA 90 bp ATCAATCAAAACAGACTCTCTAACCCCCTCCTAAGGTTGCATAGGACTTTGAACTACTCGGGTGACGTGTaGGGGGTAGAGTGGCAAGGT +
Preference number: 3 (lower is better)
Translates to: INQNRLSNPLLRLHRTLNYSGDV*GVEWQG
Trigger: ACCTTGCCACTCTACCCCCAACACGTCACCCGAGTA...GTTCAAAGTCCTATGCAACCTTAGGAGGGGGTTAGAGAGTCTGTTTTGATTGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
3UTR TCA 72 bp AAGGCACGTACACAGTCAATACAGTATGACAAGGGCTaGTGCTTCAGGAGTCAGACTAGCAGGAGACTGAGT +
Preference number: 3 (lower is better)
Translates to: KARTQSIQYDKG*CFRSQTSRRLS
Trigger: ACTCAGTCTCCTGCTAGTCTGACTCCTGAAGCATCAGCCCTTGTCATACTGTATTGACTGTGTACGTGCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
3UTR-3UTR CAA 90 bp TACTCACAAATTGATACAAACTCCTCTAGGGCCTCAGAAAACATCAATCAAAACACAGTGCACACTCCCTaGGTGCCCTGCTCCCTGCAG +
Preference number: 3 (lower is better)
Translates to: YSQIDTNSSRASENINQNTVHTP*VPCSLQ
Trigger: CTGCAGGGAGCAGGGCACCAAGGGAGTGTGCACTGT...GTTTTGATTGATGTTTTCTGAGGCCCTAGAGGAGTTTGTATCAATTTGTGAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
3UTR-3UTR CAA 90 bp CACGTCACATGGTCAAAGTCTCCTCATTTCAGCCAGTCTCAACACAAAACACCCAGGTTGCATAGGACTTaGAACTCTGGTTCCCTCATG +
Preference number: 3 (lower is better)
Translates to: HVTWSKSPHFSQSQHKTPRLHRT*NSGSLM
Trigger: CATGAGGGAACCAGAGTTCAAAGTCCTATGCAACCT...GGGTGTTTTGTGTTGAGACTGGCTGAAATGAGGAGACTTTGACCATGTGACGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
3UTR-3UTR CAA 90 bp GGTGGTTGTCTCCTTGAGTCTGTTGACACGTCACATGGTCAAAGTCTCCTCATTAACCCCCTCCTAAGGTaGCATAGGACTTTGAACTCT +
Preference number: 3 (lower is better)
Translates to: GGCLLESVDTSHGQSLLINPLLR*HRTLNS
Trigger: AGAGTTCAAAGTCCTATGCAACCTTAGGAGGGGGTT...AATGAGGAGACTTTGACCATGTGACGTGTCAACAGACTCAAGGAGACAACCACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
3UTR-3UTR CAA 90 bp AATACTCACAAATTGATACAAACTCCTCTAGGGCCTCAGAAAACATCAATCAAAGCCTGGGAGCAGGGTTaGGCCTCTCTGAGCAAGCAC +
Preference number: 3 (lower is better)
Translates to: NTHKLIQTPLGPQKTSIKAWEQG*ASLSKH
Trigger: GTGCTTGCTCAGAGAGGCCAAACCCTGCTCCCAGGC...TTTGATTGATGTTTTCTGAGGCCCTAGAGGAGTTTGTATCAATTTGTGAGTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
3UTR-3UTR CAA 90 bp CACGTCACATGGTCAAAGTCTCCTCATTTCAGCCAGTCTCAACACAAAACACCCCTGGATAGGAACAATTaGCAGATTGAGACAGTGGGA +
Preference number: 3 (lower is better)
Translates to: HVTWSKSPHFSQSQHKTPLDRNN*QIETVG
Trigger: TCCCACTGTCTCAATCTGCAAATTGTTCCTATCCAG...GGGTGTTTTGTGTTGAGACTGGCTGAAATGAGGAGACTTTGACCATGTGACGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
3UTR-3UTR CAA 90 bp AACACAAAACACCCAACAGGGATGCACTCAACTTGTTGGTTCCATGTGGAACTAAGTAGGCAAGAAGGGTaGGAGGGAGATTCAGCTCTT +
Preference number: 3 (lower is better)
Translates to: NTKHPTGMHSTCWFHVELSRQEG*EGDSAL
Trigger: AAGAGCTGAATCTCCCTCCAACCCTTCTTGCCTACT...TAGTTCCACATGGAACCAACAAGTTGAGTGCATCCCTGTTGGGTGTTTTGTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
3UTR TCA 72 bp GATGTAACTGGGACTCACTCTAGAAACGGGTCCCTCTaGCAGTTTTGGCAAAGTGCTGGTAGTACTGACATT +
Preference number: 3 (lower is better)
Translates to: DVTGTHSRNGSL*QFWQSAGSTDI
Trigger: AATGTCAGTACTACCAGCACTTTGCCAAAACTGTCAGAGGGACCCGTTTCTAGAGTGAGTCCCAGTTACATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
3UTR TCA 72 bp AGGGCTGATGCTTCAGGAGTCAGACTAGCAGGAGACTaGGTAGTGTTGGTTCTTAGAAATCTATACACAATT +
Preference number: 3 (lower is better)
Translates to: RADASGVRLAGD*VVLVLRNLYTI
Trigger: AATTGTGTATAGATTTCTAAGAACCAACACTACTCAGTCTCCTGCTAGTCTGACTCCTGAAGCATCAGCCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
3UTR CCA 72 bp AAAAATATGAGCCTTGCAACCAAGCAGGTGAGAGATTaGGTTCTAGAATACAGGAGCCTCCAGAAATATAGG +
Preference number: 3 (lower is better)
Translates to: KNMSLATKQVRD*VLEYRSLQKYR
Trigger: CCTATATTTCTGGAGGCTCCTGTATTCTAGAACCCAATCTCTCACCTGCTTGGTTGCAAGGCTCATATTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
3UTR-3UTR CAA 90 bp TACTCACAAATTGATACAAACTCCTCTAGGGCCTCAGAAAACATCAATCAAAACCTGGATAGGAACAATTaGCAGATTGAGACAGTGGGA +
Preference number: 3 (lower is better)
Translates to: YSQIDTNSSRASENINQNLDRNN*QIETVG
Trigger: TCCCACTGTCTCAATCTGCAAATTGTTCCTATCCAG...GTTTTGATTGATGTTTTCTGAGGCCCTAGAGGAGTTTGTATCAATTTGTGAGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
3UTR-3UTR CAA 90 bp AATACTCACAAATTGATACAAACTCCTCTAGGGCCTCAGAAAACATCAATCAAAAACCCCCTCCTAAGGTaGCATAGGACTTTGAACTCT +
Preference number: 3 (lower is better)
Translates to: NTHKLIQTPLGPQKTSIKNPLLR*HRTLNS
Trigger: AGAGTTCAAAGTCCTATGCAACCTTAGGAGGGGGTT...TTTGATTGATGTTTTCTGAGGCCCTAGAGGAGTTTGTATCAATTTGTGAGTATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS-3UTR GCA 90 bp GGGAGGTTTCGGTGTCCAGCCCGAGGAGTCGGAGGAGCCCGACAGGGATCGGGAGAGGCTGGTGGCCCCTaGCCCTTCTGTCTCCCCCAG +
Preference number: 4 (lower is better)
Translates to: GRFRCPARGVGGARQGSGEAGGP*PFCLPQ
Trigger: CTGGGGGAGACAGAAGGGGCAGGGGCCACCAGCCTC...TCCCGATCCCTGTCGGGCTCCTCCGACTCCTCGGGCTGGACACCGAAACCTCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS-3UTR TCA 90 bp GTCCAGCCCGAGGAGTCGGAGGAGCCCGACAGGGATCGGGATCGGCAAGGGGTTTGCTGGGGTGCTCGATaGGGAGGTCCTCCAGGGGAC +
Preference number: 4 (lower is better)
Translates to: VQPEESEEPDRDRDRQGVCWGAR*GGPPGD
Trigger: GTCCCCTGGAGGACCTCCTCATCGAGCACCCCAGCA...AACCCCTTGCCGATCCCGATCCCTGTCGGGCTCCTCCGACTCCTCGGGCTGGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS-3UTR GCA 90 bp GTCCAGCCCGAGGAGTCGGAGGAGCCCGACAGGGATCGGGATCGGCAAGGGGTTGGCGCCCTATGGCAGTaGAAAAACCTGGGGGCGGGA +
Preference number: 4 (lower is better)
Translates to: VQPEESEEPDRDRDRQGVGALWQ*KNLGAG
Trigger: TCCCGCCCCCAGGTTTTTGCACTGCCATAGGGCGCC...AACCCCTTGCCGATCCCGATCCCTGTCGGGCTCCTCCGACTCCTCGGGCTGGAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000374809.6
CDS-3UTR TCA 90 bp GTCCAGCCCGAGGAGTCGGAGGAGCCCGACAGGGATCGGGATCGGCAAGGGGTTTGGACGCTCAGTAGTTaGACTGGCGCTGGCACGGCT +
Preference number: 4 (lower is better)
Translates to: VQPEESEEPDRDRDRQGVWTLSS*TGAGTA
Trigger: AGCCGTGCCAGCGCCAGTTCAACTACTGAGCGTCCA...AACCCCTTGCCGATCCCGATCCCTGTCGGGCTCCTCCGACTCCTCGGGCTGGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS-3UTR TCA 90 bp GGGAGGTTTCGGTGTCCAGCCCGAGGAGTCGGAGGAGCCCGACAGGGATCGGGACACTGCTCTGCACGCTaGCCTAGGGTGTGTGCCCTT +
Preference number: 4 (lower is better)
Translates to: GRFRCPARGVGGARQGSGHCSAR*PRVCAL
Trigger: AAGGGCACACACCCTAGGTCAGCGTGCAGAGCAGTG...TCCCGATCCCTGTCGGGCTCCTCCGACTCCTCGGGCTGGACACCGAAACCTCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS-3UTR TCA 90 bp ATTCATACACGGTGCCCTGCTGGGGCTAGACTGGCAAAGGCTGGAAAGACACCCGTCGCTCCGGGCTGCTaGGCTCGCCCGCGGGGCTTT +
Preference number: 4 (lower is better)
Translates to: IHTRCPAGARLAKAGKTPVAPGC*ARPRGF
Trigger: AAAGCCCCGCGGGCGAGCTCAGCAGCCCGGAGCGAC...GGGTGTCTTTCCAGCCTTTGCCAGTCTAGCCCCAGCAGGGCACCGTGTATGAAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS-3UTR GCA 90 bp CCCTGCTCCCTGCAGCTTCTCAACGTGTCTGTCCTGTCCGCATCTCCAATAGGCGGTCCTCCAGGGGACTaGTCTGGAGGCGGGCGGGAC +
Preference number: 4 (lower is better)
Translates to: PCSLQLLNVSVLSASPIGGPPGD*SGGGRD
Trigger: GTCCCGCCCGCCTCCAGAGCAGTCCCCTGGAGGACC...GCCTATTGGAGATGCGGACAGGACAGACACGTTGAGAAGCTGCAGGGAGCAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS-3UTR GCA 90 bp GGGAGGTTTCGGTGTCCAGCCCGAGGAGTCGGAGGAGCCCGACAGGGATCGGGATGGTGCCCTGCTCCCTaGAGCTTCTCAACGTGTCTG +
Preference number: 4 (lower is better)
Translates to: GRFRCPARGVGGARQGSGWCPAP*SFSTCL
Trigger: CAGACACGTTGAGAAGCTGCAGGGAGCAGGGCACCA...TCCCGATCCCTGTCGGGCTCCTCCGACTCCTCGGGCTGGACACCGAAACCTCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS-3UTR GCA 90 bp GGGAGGTTTCGGTGTCCAGCCCGAGGAGTCGGAGGAGCCCGACAGGGATCGGGAAGGATGGTAGGGCCTTaGCCAGCTTCTACTCGGGTG +
Preference number: 4 (lower is better)
Translates to: GRFRCPARGVGGARQGSGRMVGP*PASTRV
Trigger: CACCCGAGTAGAAGCTGGGCAAGGCCCTACCATCCT...TCCCGATCCCTGTCGGGCTCCTCCGACTCCTCGGGCTGGACACCGAAACCTCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS-3UTR CCA 90 bp CCCTGCTCCCTGCAGCTTCTCAACGTGTCTGTCCTGTCCGCATCTCCAATAGGCTGCAGCCGCCGCACCTaGCCCGCCTTCTCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: PCSLQLLNVSVLSASPIGCSRRT*PAFSSS
Trigger: GCTGCTGGAGAAGGCGGGCCAGGTGCGGCGGCTGCA...GCCTATTGGAGATGCGGACAGGACAGACACGTTGAGAAGCTGCAGGGAGCAGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS-3UTR CCA 90 bp TTCATACACGGTGCCCTGCTGGGGCTAGACTGGCAAAGGCTGGAAAGACACCCATTGGCGCTCAGCGCGTaGCGCTCTGCCCGCTGCCGG +
Preference number: 4 (lower is better)
Translates to: FIHGALLGLDWQRLERHPLALSA*RSARCR
Trigger: CCGGCAGCGGGCAGAGCGCCACGCGCTGAGCGCCAA...TGGGTGTCTTTCCAGCCTTTGCCAGTCTAGCCCCAGCAGGGCACCGTGTATGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS-3UTR CCA 90 bp AGGGCCTGCAGAAGGGTGGATTATAGAAAAGGGAAGTGGGGGCAGACTCCAGGCTTGGCGCTCAGCGCGTaGCGCTCTGCCCGCTGCCGG +
Preference number: 4 (lower is better)
Translates to: RACRRVDYRKGKWGQTPGLALSA*RSARCR
Trigger: CCGGCAGCGGGCAGAGCGCCACGCGCTGAGCGCCAA...GCCTGGAGTCTGCCCCCACTTCCCTTTTCTATAATCCACCCTTCTGCAGGCCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS-3UTR CCA 90 bp CCCTGCTCCCTGCAGCTTCTCAACGTGTCTGTCCTGTCCGCATCTCCAATAGGCTCGGCAAGGGGTTCGTaGCGCGGCCGGTGGACGCTC +
Preference number: 4 (lower is better)
Translates to: PCSLQLLNVSVLSASPIGSARGS*RGRWTL
Trigger: GAGCGTCCACCGGCCGCGCCACGAACCCCTTGCCGA...GCCTATTGGAGATGCGGACAGGACAGACACGTTGAGAAGCTGCAGGGAGCAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS-3UTR CCA 90 bp GTCCAGCCCGAGGAGTCGGAGGAGCCCGACAGGGATCGGGATCGGCAAGGGGTTCCAGAGGTAGAGGACTaGAGGGCAAGGGTGAAAGGG +
Preference number: 4 (lower is better)
Translates to: VQPEESEEPDRDRDRQGVPEVED*RARVKG
Trigger: CCCTTTCACCCTTGCCCTCCAGTCCTCTACCTCTGG...AACCCCTTGCCGATCCCGATCCCTGTCGGGCTCCTCCGACTCCTCGGGCTGGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS-3UTR CCA 90 bp GTCCAGCCCGAGGAGTCGGAGGAGCCCGACAGGGATCGGGATCGGCAAGGGGTTGGTATCCAAGAGCTCTaGTGGGGTCCGTGTTGCACC +
Preference number: 4 (lower is better)
Translates to: VQPEESEEPDRDRDRQGVGIQEL*WGPCCT
Trigger: GGTGCAACACGGACCCCACCAGAGCTCTTGGATACC...AACCCCTTGCCGATCCCGATCCCTGTCGGGCTCCTCCGACTCCTCGGGCTGGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS-3UTR GCA 90 bp ATTCATACACGGTGCCCTGCTGGGGCTAGACTGGCAAAGGCTGGAAAGACACCCGGTCCTCCAGGGGACTaGTCTGGAGGCGGGCGGGAC +
Preference number: 4 (lower is better)
Translates to: IHTRCPAGARLAKAGKTPGPPGD*SGGGRD
Trigger: GTCCCGCCCGCCTCCAGAGCAGTCCCCTGGAGGACC...GGGTGTCTTTCCAGCCTTTGCCAGTCTAGCCCCAGCAGGGCACCGTGTATGAAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS-3UTR GCA 90 bp TTCATACACGGTGCCCTGCTGGGGCTAGACTGGCAAAGGCTGGAAAGACACCCATCGCGGGCTCGGTTCTaGCGCTGCACCGCCTTGGCG +
Preference number: 4 (lower is better)
Translates to: FIHGALLGLDWQRLERHPSRARF*RCTALA
Trigger: CGCCAAGGCGGTGCAGCGGCAGAACCGAGCCCGCGA...TGGGTGTCTTTCCAGCCTTTGCCAGTCTAGCCCCAGCAGGGCACCGTGTATGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS-3UTR GCA 90 bp ATTCATACACGGTGCCCTGCTGGGGCTAGACTGGCAAAGGCTGGAAAGACACCCTCGCGGGCTCGGTTCTaGCGCTGCACCGCCTTGGCG +
Preference number: 4 (lower is better)
Translates to: IHTRCPAGARLAKAGKTPSRARF*RCTALA
Trigger: CGCCAAGGCGGTGCAGCGGCAGAACCGAGCCCGCGA...GGGTGTCTTTCCAGCCTTTGCCAGTCTAGCCCCAGCAGGGCACCGTGTATGAAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS-3UTR GCA 90 bp GGGAGGTTTCGGTGTCCAGCCCGAGGAGTCGGAGGAGCCCGACAGGGATCGGGATGCATTCATACACGGTaGCCTGCTGGGGCTAGACTG +
Preference number: 4 (lower is better)
Translates to: GRFRCPARGVGGARQGSGCIHTR*PAGARL
Trigger: CAGTCTAGCCCCAGCAGGGCACCGTGTATGAATGCA...TCCCGATCCCTGTCGGGCTCCTCCGACTCCTCGGGCTGGACACCGAAACCTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS-3UTR CCA 90 bp GTCCAGCCCGAGGAGTCGGAGGAGCCCGACAGGGATCGGGATCGGCAAGGGGTTTCATCCCAGCATCCATaGGGATACCCCATCCCTTCC +
Preference number: 4 (lower is better)
Translates to: VQPEESEEPDRDRDRQGVSSQHP*GYPIPS
Trigger: GGAAGGGATGGGGTATCCCCATGGATGCTGGGATGA...AACCCCTTGCCGATCCCGATCCCTGTCGGGCTCCTCCGACTCCTCGGGCTGGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS-3UTR CCA 90 bp GGGAGGTTTCGGTGTCCAGCCCGAGGAGTCGGAGGAGCCCGACAGGGATCGGGACTGCTGGGGCTAGACTaGCAAAGGCTGGAAAGACAC +
Preference number: 4 (lower is better)
Translates to: GRFRCPARGVGGARQGSGLLGLD*QRLERH
Trigger: GTGTCTTTCCAGCCTTTGCCAGTCTAGCCCCAGCAG...TCCCGATCCCTGTCGGGCTCCTCCGACTCCTCGGGCTGGACACCGAAACCTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS-3UTR GCA 90 bp AGGGCCTGCAGAAGGGTGGATTATAGAAAAGGGAAGTGGGGGCAGACTCCAGGCGAGGCTGGTGGCCCCTaGCCCTTCTGTCTCCCCCAG +
Preference number: 4 (lower is better)
Translates to: RACRRVDYRKGKWGQTPGEAGGP*PFCLPQ
Trigger: CTGGGGGAGACAGAAGGGGCAGGGGCCACCAGCCTC...GCCTGGAGTCTGCCCCCACTTCCCTTTTCTATAATCCACCCTTCTGCAGGCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS-3UTR CCA 90 bp TTCATACACGGTGCCCTGCTGGGGCTAGACTGGCAAAGGCTGGAAAGACACCCATCCAGGGGACTGCTCTaGAGGCGGGCGGGACCGAGT +
Preference number: 4 (lower is better)
Translates to: FIHGALLGLDWQRLERHPSRGLL*RRAGPS
Trigger: ACTCGGTCCCGCCCGCCTCCAGAGCAGTCCCCTGGA...TGGGTGTCTTTCCAGCCTTTGCCAGTCTAGCCCCAGCAGGGCACCGTGTATGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS-3UTR CCA 90 bp GTCCAGCCCGAGGAGTCGGAGGAGCCCGACAGGGATCGGGATCGGCAAGGGGTTATTAGATGCTGGGTATaGGGACCAGGAGTGAGGGTG +
Preference number: 4 (lower is better)
Translates to: VQPEESEEPDRDRDRQGVIRCWV*GPGVRV
Trigger: CACCCTCACTCCTGGTCCCCATACCCAGCATCTAAT...AACCCCTTGCCGATCCCGATCCCTGTCGGGCTCCTCCGACTCCTCGGGCTGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS-3UTR TCA 90 bp GTCCAGCCCGAGGAGTCGGAGGAGCCCGACAGGGATCGGGATCGGCAAGGGGTTCTAAAAGCAAAACCCTaGGCCCTTACTGGAGGGCAA +
Preference number: 4 (lower is better)
Translates to: VQPEESEEPDRDRDRQGVLKAKP*ALTGGQ
Trigger: TTGCCCTCCAGTAAGGGCTCAGGGTTTTGCTTTTAG...AACCCCTTGCCGATCCCGATCCCTGTCGGGCTCCTCCGACTCCTCGGGCTGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS-3UTR TCA 90 bp GGGAGGTTTCGGTGTCCAGCCCGAGGAGTCGGAGGAGCCCGACAGGGATCGGGAATACTGAGCAGGGTGTaGAATACAAGGCCAGAGGCA +
Preference number: 4 (lower is better)
Translates to: GRFRCPARGVGGARQGSGILSRV*NTRPEA
Trigger: TGCCTCTGGCCTTGTATTTCACACCCTGCTCAGTAT...TCCCGATCCCTGTCGGGCTCCTCCGACTCCTCGGGCTGGACACCGAAACCTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS-3UTR CCA 90 bp CCCTGCTCCCTGCAGCTTCTCAACGTGTCTGTCCTGTCCGCATCTCCAATAGGCAGCTGCTCTGGTTCTTaGACCGGCGCGGACGGCTCT +
Preference number: 4 (lower is better)
Translates to: PCSLQLLNVSVLSASPIGSCSGS*TGADGS
Trigger: AGAGCCGTCCGCGCCGGTCCAAGAACCAGAGCAGCT...GCCTATTGGAGATGCGGACAGGACAGACACGTTGAGAAGCTGCAGGGAGCAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS-3UTR CCA 90 bp GTCCAGCCCGAGGAGTCGGAGGAGCCCGACAGGGATCGGGATCGGCAAGGGGTTTGCAGATTGAGACAGTaGGAGTCCTGGACTCCTACT +
Preference number: 4 (lower is better)
Translates to: VQPEESEEPDRDRDRQGVCRLRQ*ESWTPT
Trigger: AGTAGGAGTCCAGGACTCCCACTGTCTCAATCTGCA...AACCCCTTGCCGATCCCGATCCCTGTCGGGCTCCTCCGACTCCTCGGGCTGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS-3UTR CCA 90 bp GGGAGGTTTCGGTGTCCAGCCCGAGGAGTCGGAGGAGCCCGACAGGGATCGGGATGCAGATTGAGACAGTaGGAGTCCTGGACTCCTACT +
Preference number: 4 (lower is better)
Translates to: GRFRCPARGVGGARQGSGCRLRQ*ESWTPT
Trigger: AGTAGGAGTCCAGGACTCCCACTGTCTCAATCTGCA...TCCCGATCCCTGTCGGGCTCCTCCGACTCCTCGGGCTGGACACCGAAACCTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS-3UTR TCA 90 bp GGGAGGTTTCGGTGTCCAGCCCGAGGAGTCGGAGGAGCCCGACAGGGATCGGGACTGGAAGTCACTGTTTaGTGTAACTGGGACTCACTC +
Preference number: 4 (lower is better)
Translates to: GRFRCPARGVGGARQGSGLEVTV*CNWDSL
Trigger: GAGTGAGTCCCAGTTACATCAAACAGTGACTTCCAG...TCCCGATCCCTGTCGGGCTCCTCCGACTCCTCGGGCTGGACACCGAAACCTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS-3UTR GCA 90 bp ATTCATACACGGTGCCCTGCTGGGGCTAGACTGGCAAAGGCTGGAAAGACACCCGAGTCCAGGCCCCTCTaGCGTAAAACAGGCGGGAGG +
Preference number: 4 (lower is better)
Translates to: IHTRCPAGARLAKAGKTPESRPL*RKTGGR
Trigger: CCTCCCGCCTGTTTTACGGCAGAGGGGCCTGGACTC...GGGTGTCTTTCCAGCCTTTGCCAGTCTAGCCCCAGCAGGGCACCGTGTATGAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS-3UTR CCA 90 bp TTCATACACGGTGCCCTGCTGGGGCTAGACTGGCAAAGGCTGGAAAGACACCCACACGGGGGCGCCCTATaGCAGTGCAAAAACCTGGGG +
Preference number: 4 (lower is better)
Translates to: FIHGALLGLDWQRLERHPHGGAL*QCKNLG
Trigger: CCCCAGGTTTTTGCACTGCCATAGGGCGCCCCCGTG...TGGGTGTCTTTCCAGCCTTTGCCAGTCTAGCCCCAGCAGGGCACCGTGTATGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000374809.6
CDS-3UTR CCA 90 bp GAATGCAGAGTTTTCTCCAAGCTTCAGCTTGGCTGTGAGGCCTGGAAACCTAGAGCCGCTGCACCGCCTTaGCGCTCAGCGCGTGGCGCT +
Preference number: 4 (lower is better)
Translates to: ECRVFSKLQLGCEAWKPRAAAPP*RSARGA
Trigger: AGCGCCACGCGCTGAGCGCCAAGGCGGTGCAGCGGC...TCTAGGTTTCCAGGCCTCACAGCCAAGCTGAAGCTTGGAGAAAACTCTGCATTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS-3UTR CCA 90 bp TTCATACACGGTGCCCTGCTGGGGCTAGACTGGCAAAGGCTGGAAAGACACCCAAGCTGCTCTGGTTCTTaGACCGGCGCGGACGGCTCT +
Preference number: 4 (lower is better)
Translates to: FIHGALLGLDWQRLERHPSCSGS*TGADGS
Trigger: AGAGCCGTCCGCGCCGGTCCAAGAACCAGAGCAGCT...TGGGTGTCTTTCCAGCCTTTGCCAGTCTAGCCCCAGCAGGGCACCGTGTATGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS-3UTR CCA 90 bp CTCAACTTGTTGGTTCCATGTGGAACTAGGTGGCAGGGCGAGAGGGAAAGTAGTTCGGCAAGGGGTTCGTaGCGCGGCCGGTGGACGCTC +
Preference number: 4 (lower is better)
Translates to: LNLLVPCGTRWQGERESSSARGS*RGRWTL
Trigger: GAGCGTCCACCGGCCGCGCCACGAACCCCTTGCCGA...ACTACTTTCCCTCTCGCCCTGCCACCTAGTTCCACATGGAACCAACAAGTTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS-3UTR TCA 90 bp CACGTCACATGGTCAAAGTCTCCTCATTTCAGCCAGTCTCAACACAAAACACCCGGGGCGGCACGGCGTTaGGGTAGTTGTGCGGCGGGG +
Preference number: 4 (lower is better)
Translates to: HVTWSKSPHFSQSQHKTPGAARR*GSCAAG
Trigger: CCCCGCCGCACAACTACCTCAACGCCGTGCCGCCCC...GGGTGTTTTGTGTTGAGACTGGCTGAAATGAGGAGACTTTGACCATGTGACGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS-3UTR TCA 90 bp AGGGCCTGCAGAAGGGTGGATTATAGAAAAGGGAAGTGGGGGCAGACTCCAGGCTGGACGCTCAGTAGTTaGACTGGCGCTGGCACGGCT +
Preference number: 4 (lower is better)
Translates to: RACRRVDYRKGKWGQTPGWTLSS*TGAGTA
Trigger: AGCCGTGCCAGCGCCAGTTCAACTACTGAGCGTCCA...GCCTGGAGTCTGCCCCCACTTCCCTTTTCTATAATCCACCCTTCTGCAGGCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS-3UTR TCA 90 bp GGGAGGTTTCGGTGTCCAGCCCGAGGAGTCGGAGGAGCCCGACAGGGATCGGGACTGGCGTGGGAGCTTTaGTCCGTTTTTAGTGTTAAT +
Preference number: 4 (lower is better)
Translates to: GRFRCPARGVGGARQGSGLAWEL*SVFSVN
Trigger: ATTAACACTAAAAACGGATCAAAGCTCCCACGCCAG...TCCCGATCCCTGTCGGGCTCCTCCGACTCCTCGGGCTGGACACCGAAACCTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS-3UTR GCA 90 bp AGAGTTTTCTCCAAGCTTCAGCTTGGCTGTGAGGCCTGGAAACCTAGAGTTGGGGCTCGGTTCTGCCGCTaGACCGCCTTGGCGCTCAGC +
Preference number: 4 (lower is better)
Translates to: RVFSKLQLGCEAWKPRVGARFCR*TALALS
Trigger: GCTGAGCGCCAAGGCGGTGCAGCGGCAGAACCGAGC...CCCAACTCTAGGTTTCCAGGCCTCACAGCCAAGCTGAAGCTTGGAGAAAACTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS-3UTR GCA 90 bp ATTCATACACGGTGCCCTGCTGGGGCTAGACTGGCAAAGGCTGGAAAGACACCCTGCACACTCCCTTGGTaGCCTGCTCCCTGCAGCTTC +
Preference number: 4 (lower is better)
Translates to: IHTRCPAGARLAKAGKTPCTLPW*PAPCSF
Trigger: GAAGCTGCAGGGAGCAGGGCACCAAGGGAGTGTGCA...GGGTGTCTTTCCAGCCTTTGCCAGTCTAGCCCCAGCAGGGCACCGTGTATGAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS-3UTR GCA 90 bp CCCTGCTCCCTGCAGCTTCTCAACGTGTCTGTCCTGTCCGCATCTCCAATAGGCTGTGTGCCCTTTCCCTaGCTAGAAGCCCTGTGGCCT +
Preference number: 4 (lower is better)
Translates to: PCSLQLLNVSVLSASPIGCVPFP*LEALWP
Trigger: AGGCCACAGGGCTTCTAGGCAGGGAAAGGGCACACA...GCCTATTGGAGATGCGGACAGGACAGACACGTTGAGAAGCTGCAGGGAGCAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS-3UTR GCA 90 bp GGGAGGTTTCGGTGTCCAGCCCGAGGAGTCGGAGGAGCCCGACAGGGATCGGGATTGCCCTCATGGGAATaGAGAGTTTTCTCCAAGCTT +
Preference number: 4 (lower is better)
Translates to: GRFRCPARGVGGARQGSGLPSWE*RVFSKL
Trigger: AAGCTTGGAGAAAACTCTGCATTCCCATGAGGGCAA...TCCCGATCCCTGTCGGGCTCCTCCGACTCCTCGGGCTGGACACCGAAACCTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS-3UTR TCA 90 bp CCCTGCTCCCTGCAGCTTCTCAACGTGTCTGTCCTGTCCGCATCTCCAATAGGCAGGGTTTGGCCTCTCTaGGCAAGCACAGTGCACACT +
Preference number: 4 (lower is better)
Translates to: PCSLQLLNVSVLSASPIGRVWPL*ASTVHT
Trigger: AGTGTGCACTGTGCTTGCTCAGAGAGGCCAAACCCT...GCCTATTGGAGATGCGGACAGGACAGACACGTTGAGAAGCTGCAGGGAGCAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS-3UTR TCA 90 bp TTCATACACGGTGCCCTGCTGGGGCTAGACTGGCAAAGGCTGGAAAGACACCCAAGGCCAGAGGCAAGGTaGAGACTGAGCTGTCAGCCT +
Preference number: 4 (lower is better)
Translates to: FIHGALLGLDWQRLERHPRPEAR*RLSCQP
Trigger: AGGCTGACAGCTCAGTCTTCACCTTGCCTCTGGCCT...TGGGTGTCTTTCCAGCCTTTGCCAGTCTAGCCCCAGCAGGGCACCGTGTATGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS-3UTR TCA 90 bp AGGGCCTGCAGAAGGGTGGATTATAGAAAAGGGAAGTGGGGGCAGACTCCAGGCAGGCCAGAGGCAAGGTaGAGACTGAGCTGTCAGCCT +
Preference number: 4 (lower is better)
Translates to: RACRRVDYRKGKWGQTPGRPEAR*RLSCQP
Trigger: AGGCTGACAGCTCAGTCTTCACCTTGCCTCTGGCCT...GCCTGGAGTCTGCCCCCACTTCCCTTTTCTATAATCCACCCTTCTGCAGGCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS-3UTR TCA 90 bp TTCATACACGGTGCCCTGCTGGGGCTAGACTGGCAAAGGCTGGAAAGACACCCAACCCTAGGCTGGCTGTaGAGTGCCCAAGTGGTAGCT +
Preference number: 4 (lower is better)
Translates to: FIHGALLGLDWQRLERHPTLGWL*SAQVVA
Trigger: AGCTACCACTTGGGCACTTCACAGCCAGCCTAGGGT...TGGGTGTCTTTCCAGCCTTTGCCAGTCTAGCCCCAGCAGGGCACCGTGTATGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS-3UTR GCA 90 bp AGGGCCTGCAGAAGGGTGGATTATAGAAAAGGGAAGTGGGGGCAGACTCCAGGCTGGTGCCCTGCTCCCTaGAGCTTCTCAACGTGTCTG +
Preference number: 4 (lower is better)
Translates to: RACRRVDYRKGKWGQTPGWCPAP*SFSTCL
Trigger: CAGACACGTTGAGAAGCTGCAGGGAGCAGGGCACCA...GCCTGGAGTCTGCCCCCACTTCCCTTTTCTATAATCCACCCTTCTGCAGGCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS-3UTR GCA 90 bp AGGGCCTGCAGAAGGGTGGATTATAGAAAAGGGAAGTGGGGGCAGACTCCAGGCTGTGTGCCCTTTCCCTaGCTAGAAGCCCTGTGGCCT +
Preference number: 4 (lower is better)
Translates to: RACRRVDYRKGKWGQTPGCVPFP*LEALWP
Trigger: AGGCCACAGGGCTTCTAGGCAGGGAAAGGGCACACA...GCCTGGAGTCTGCCCCCACTTCCCTTTTCTATAATCCACCCTTCTGCAGGCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS-3UTR GCA 90 bp GGGAGGTTTCGGTGTCCAGCCCGAGGAGTCGGAGGAGCCCGACAGGGATCGGGATGGATAGGAACAATTTaGAGATTGAGACAGTGGGAG +
Preference number: 4 (lower is better)
Translates to: GRFRCPARGVGGARQGSGWIGTI*RLRQWE
Trigger: CTCCCACTGTCTCAATCTGCAAATTGTTCCTATCCA...TCCCGATCCCTGTCGGGCTCCTCCGACTCCTCGGGCTGGACACCGAAACCTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS-3UTR GCA 90 bp AGGGCCTGCAGAAGGGTGGATTATAGAAAAGGGAAGTGGGGGCAGACTCCAGGCGAGGGCAGCTGCCTTTaGCCTCATGGGAATGCAGAG +
Preference number: 4 (lower is better)
Translates to: RACRRVDYRKGKWGQTPGEGSCL*PHGNAE
Trigger: CTCTGCATTCCCATGAGGGCAAAGGCAGCTGCCCTC...GCCTGGAGTCTGCCCCCACTTCCCTTTTCTATAATCCACCCTTCTGCAGGCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS-3UTR GCA 90 bp ATTCATACACGGTGCCCTGCTGGGGCTAGACTGGCAAAGGCTGGAAAGACACCCGTCAGGGAGGGCAGCTaGCTTTGCCCTCATGGGAAT +
Preference number: 4 (lower is better)
Translates to: IHTRCPAGARLAKAGKTPVREGS*LCPHGN
Trigger: ATTCCCATGAGGGCAAAGGCAGCTGCCCTCCCTGAC...GGGTGTCTTTCCAGCCTTTGCCAGTCTAGCCCCAGCAGGGCACCGTGTATGAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS-3UTR GCA 90 bp CCCTGCTCCCTGCAGCTTCTCAACGTGTCTGTCCTGTCCGCATCTCCAATAGGCAGGCTGGCTGTGAAGTaGCCAAGTGGTAGCTGGAAG +
Preference number: 4 (lower is better)
Translates to: PCSLQLLNVSVLSASPIGRLAVK*PSGSWK
Trigger: CTTCCAGCTACCACTTGGGCACTTCACAGCCAGCCT...GCCTATTGGAGATGCGGACAGGACAGACACGTTGAGAAGCTGCAGGGAGCAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS-3UTR CCA 90 bp GAATGCAGAGTTTTCTCCAAGCTTCAGCTTGGCTGTGAGGCCTGGAAACCTAGAGGCGCTGGAACATGGTaGGGGGCGAAGCGCCTCACG +
Preference number: 4 (lower is better)
Translates to: ECRVFSKLQLGCEAWKPRGAGTW*GAKRLT
Trigger: CGTGAGGCGCTTCGCCCCCCACCATGTTCCAGCGCC...TCTAGGTTTCCAGGCCTCACAGCCAAGCTGAAGCTTGGAGAAAACTCTGCATTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS-3UTR CCA 90 bp CCCTGCTCCCTGCAGCTTCTCAACGTGTCTGTCCTGTCCGCATCTCCAATAGGCGATGGCTTCACCCCATaGTGTGTCCTCCAGCATCAC +
Preference number: 4 (lower is better)
Translates to: PCSLQLLNVSVLSASPIGDGFTP*CVLQHH
Trigger: GTGATGCTGGAGGACACACCATGGGGTGAAGCCATC...GCCTATTGGAGATGCGGACAGGACAGACACGTTGAGAAGCTGCAGGGAGCAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS-3UTR CCA 90 bp TTCATACACGGTGCCCTGCTGGGGCTAGACTGGCAAAGGCTGGAAAGACACCCACACGGGGGCGCCCTATaGCAGTGCAAAAACCTCTCT +
Preference number: 4 (lower is better)
Translates to: FIHGALLGLDWQRLERHPHGGAL*QCKNLS
Trigger: AGAGAGGTTTTTGCACTGCCATAGGGCGCCCCCGTG...TGGGTGTCTTTCCAGCCTTTGCCAGTCTAGCCCCAGCAGGGCACCGTGTATGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000374810.8
CDS-3UTR GCA 90 bp GCCAGTCTCAACACAAAACACCCAACAGGGATGCACTCAACTTGTTGGTTCCATGCTCGGTTCTGCCGCTaGACCGCCTTGGCGCTCAGC +
Preference number: 4 (lower is better)
Translates to: ASLNTKHPTGMHSTCWFHARFCR*TALALS
Trigger: GCTGAGCGCCAAGGCGGTGCAGCGGCAGAACCGAGC...ATGGAACCAACAAGTTGAGTGCATCCCTGTTGGGTGTTTTGTGTTGAGACTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS-3UTR CCA 90 bp AAGTCTCCTCATTTCAGCCAGTCTCAACACAAAACACCCAACAGGGATGCACTCGGCGCTGGAACATGGTaGGGGGCGAAGCGCCTCACG +
Preference number: 4 (lower is better)
Translates to: KSPHFSQSQHKTPNRDALGAGTW*GAKRLT
Trigger: CGTGAGGCGCTTCGCCCCCCACCATGTTCCAGCGCC...GAGTGCATCCCTGTTGGGTGTTTTGTGTTGAGACTGGCTGAAATGAGGAGACTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS-3UTR CCA 90 bp AACACAAAACACCCAACAGGGATGCACTCAACTTGTTGGTTCCATGTGGAACTAGCCGCTGCACCGCCTTaGCGCTCAGCGCGTGGCGCT +
Preference number: 4 (lower is better)
Translates to: NTKHPTGMHSTCWFHVELAAAPP*RSARGA
Trigger: AGCGCCACGCGCTGAGCGCCAAGGCGGTGCAGCGGC...TAGTTCCACATGGAACCAACAAGTTGAGTGCATCCCTGTTGGGTGTTTTGTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS-3UTR CCA 90 bp CCCTGCTCCCTGCAGCTTCTCAACGTGTCTGTCCTGTCCGCATCTCCAATAGGCCTAGTTCTAGCACCTTaGGCTTGTGAACAGACGGCC +
Preference number: 4 (lower is better)
Translates to: PCSLQLLNVSVLSASPIGLVLAP*ACEQTA
Trigger: GGCCGTCTGTTCACAAGCCCAAGGTGCTAGAACTAG...GCCTATTGGAGATGCGGACAGGACAGACACGTTGAGAAGCTGCAGGGAGCAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS-3UTR CCA 90 bp AGGGCCTGCAGAAGGGTGGATTATAGAAAAGGGAAGTGGGGGCAGACTCCAGGCTGCCTAGAAGCCCTGTaGCCTGCATGTCTCCTAAGC +
Preference number: 4 (lower is better)
Translates to: RACRRVDYRKGKWGQTPGCLEAL*PACLLS
Trigger: GCTTAGGAGACATGCAGGCCACAGGGCTTCTAGGCA...GCCTGGAGTCTGCCCCCACTTCCCTTTTCTATAATCCACCCTTCTGCAGGCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS-3UTR CCA 90 bp TTCATACACGGTGCCCTGCTGGGGCTAGACTGGCAAAGGCTGGAAAGACACCCACCACCAGAAGGATCATaGGCACCACACAGGACTGAG +
Preference number: 4 (lower is better)
Translates to: FIHGALLGLDWQRLERHPPPEGS*APHRTE
Trigger: CTCAGTCCTGTGTGGTGCCCATGATCCTTCTGGTGG...TGGGTGTCTTTCCAGCCTTTGCCAGTCTAGCCCCAGCAGGGCACCGTGTATGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS-3UTR CCA 90 bp AGGGCCTGCAGAAGGGTGGATTATAGAAAAGGGAAGTGGGGGCAGACTCCAGGCCCATGTGGAACTAGGTaGCAGGGCGAGAGGGAAAGT +
Preference number: 4 (lower is better)
Translates to: RACRRVDYRKGKWGQTPGPCGTR*QGERES
Trigger: ACTTTCCCTCTCGCCCTGCCACCTAGTTCCACATGG...GCCTGGAGTCTGCCCCCACTTCCCTTTTCTATAATCCACCCTTCTGCAGGCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS-3UTR TCA 90 bp ATCAATCAAAACAGACTCTCTAACCCCCTCCTAAGGTTGCATAGGACTTTGAACGGGGCGGCACGGCGTTaGGGTAGTTGTGCGGCGGGG +
Preference number: 4 (lower is better)
Translates to: INQNRLSNPLLRLHRTLNGAARR*GSCAAG
Trigger: CCCCGCCGCACAACTACCTCAACGCCGTGCCGCCCC...GTTCAAAGTCCTATGCAACCTTAGGAGGGGGTTAGAGAGTCTGTTTTGATTGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS-3UTR TCA 90 bp GAATGCAGAGTTTTCTCCAAGCTTCAGCTTGGCTGTGAGGCCTGGAAACCTAGATCAATTCCCCTTCGCTaGGGTCGCCGTCAGGCAGGG +
Preference number: 4 (lower is better)
Translates to: ECRVFSKLQLGCEAWKPRSIPLR*GRRQAG
Trigger: CCCTGCCTGACGGCGACCTCAGCGAAGGGGAATTGA...TCTAGGTTTCCAGGCCTCACAGCCAAGCTGAAGCTTGGAGAAAACTCTGCATTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS-3UTR TCA 90 bp ATTCATACACGGTGCCCTGCTGGGGCTAGACTGGCAAAGGCTGGAAAGACACCCAGTAGGGGGCATGGATaGTTAGATGCTGGGTATGGG +
Preference number: 4 (lower is better)
Translates to: IHTRCPAGARLAKAGKTPSRGHG*LDAGYG
Trigger: CCCATACCCAGCATCTAATCATCCATGCCCCCTACT...GGGTGTCTTTCCAGCCTTTGCCAGTCTAGCCCCAGCAGGGCACCGTGTATGAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS-3UTR TCA 90 bp CTCAACTTGTTGGTTCCATGTGGAACTAGGTGGCAGGGCGAGAGGGAAAGTAGTCACTGCTCTGCACGCTaGCCTAGGGTGTGTGCCCTT +
Preference number: 4 (lower is better)
Translates to: LNLLVPCGTRWQGERESSHCSAR*PRVCAL
Trigger: AAGGGCACACACCCTAGGTCAGCGTGCAGAGCAGTG...ACTACTTTCCCTCTCGCCCTGCCACCTAGTTCCACATGGAACCAACAAGTTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS-3UTR GCA 90 bp AGGGCCTGCAGAAGGGTGGATTATAGAAAAGGGAAGTGGGGGCAGACTCCAGGCACTCCTACTCAGGACTaGTGGCTAGCCATACTGAGC +
Preference number: 4 (lower is better)
Translates to: RACRRVDYRKGKWGQTPGTPTQD*WLAILS
Trigger: GCTCAGTATGGCTAGCCAGCAGTCCTGAGTAGGAGT...GCCTGGAGTCTGCCCCCACTTCCCTTTTCTATAATCCACCCTTCTGCAGGCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS-3UTR CCA 90 bp CTCAACTTGTTGGTTCCATGTGGAACTAGGTGGCAGGGCGAGAGGGAAAGTAGTCTACCTGGTCAGAGCTaGGCTCAGGGTCCCCACCAT +
Preference number: 4 (lower is better)
Translates to: LNLLVPCGTRWQGERESSLPGQS*AQGPHH
Trigger: ATGGTGGGGACCCTGAGCCCAGCTCTGACCAGGTAG...ACTACTTTCCCTCTCGCCCTGCCACCTAGTTCCACATGGAACCAACAAGTTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS-3UTR CCA 90 bp CCCTGCTCCCTGCAGCTTCTCAACGTGTCTGTCCTGTCCGCATCTCCAATAGGCCTGCCTTTGCCCTCATaGGAATGCAGAGTTTTCTCC +
Preference number: 4 (lower is better)
Translates to: PCSLQLLNVSVLSASPIGLPLPS*ECRVFS
Trigger: GGAGAAAACTCTGCATTCCCATGAGGGCAAAGGCAG...GCCTATTGGAGATGCGGACAGGACAGACACGTTGAGAAGCTGCAGGGAGCAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS-3UTR CCA 90 bp GGGAGGTTTCGGTGTCCAGCCCGAGGAGTCGGAGGAGCCCGACAGGGATCGGGATTACTGGGGAATAACTaGAAGTCACTGTTTGATGTA +
Preference number: 4 (lower is better)
Translates to: GRFRCPARGVGGARQGSGLLGNN*KSLFDV
Trigger: TACATCAAACAGTGACTTCCAGTTATTCCCCAGTAA...TCCCGATCCCTGTCGGGCTCCTCCGACTCCTCGGGCTGGACACCGAAACCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS-3UTR TCA 90 bp AGAGTTTTCTCCAAGCTTCAGCTTGGCTGTGAGGCCTGGAAACCTAGAGTTGGGCTATGGTGCTGCCGGTaGCGTAAACGGACATGCTGG +
Preference number: 4 (lower is better)
Translates to: RVFSKLQLGCEAWKPRVGLWCCR*RKRTCW
Trigger: CCAGCATGTCCGTTTACGTCACCGGCAGCACCATAG...CCCAACTCTAGGTTTCCAGGCCTCACAGCCAAGCTGAAGCTTGGAGAAAACTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS-3UTR TCA 90 bp ATTCATACACGGTGCCCTGCTGGGGCTAGACTGGCAAAGGCTGGAAAGACACCCCTAAAAGCAAAACCCTaGGCCCTTACTGGAGGGCAA +
Preference number: 4 (lower is better)
Translates to: IHTRCPAGARLAKAGKTPLKAKP*ALTGGQ
Trigger: TTGCCCTCCAGTAAGGGCTCAGGGTTTTGCTTTTAG...GGGTGTCTTTCCAGCCTTTGCCAGTCTAGCCCCAGCAGGGCACCGTGTATGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS-3UTR TCA 90 bp CTCAACTTGTTGGTTCCATGTGGAACTAGGTGGCAGGGCGAGAGGGAAAGTAGTAGCACCTTGGGCTTGTaGACAGACGGCCAGGATGGT +
Preference number: 4 (lower is better)
Translates to: LNLLVPCGTRWQGERESSSTLGL*TDGQDG
Trigger: ACCATCCTGGCCGTCTGTTCACAAGCCCAAGGTGCT...ACTACTTTCCCTCTCGCCCTGCCACCTAGTTCCACATGGAACCAACAAGTTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS-3UTR TCA 90 bp ATTCATACACGGTGCCCTGCTGGGGCTAGACTGGCAAAGGCTGGAAAGACACCCATACTGAGCAGGGTGTaGAATACAAGGCCAGAGGCA +
Preference number: 4 (lower is better)
Translates to: IHTRCPAGARLAKAGKTPILSRV*NTRPEA
Trigger: TGCCTCTGGCCTTGTATTTCACACCCTGCTCAGTAT...GGGTGTCTTTCCAGCCTTTGCCAGTCTAGCCCCAGCAGGGCACCGTGTATGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS-3UTR TCA 90 bp TTCATACACGGTGCCCTGCTGGGGCTAGACTGGCAAAGGCTGGAAAGACACCCAGAAGCATGCTCAAGGTaGAAGGCACGTACACAGTCA +
Preference number: 4 (lower is better)
Translates to: FIHGALLGLDWQRLERHPEACSR*KARTQS
Trigger: TGACTGTGTACGTGCCTTTCACCTTGAGCATGCTTC...TGGGTGTCTTTCCAGCCTTTGCCAGTCTAGCCCCAGCAGGGCACCGTGTATGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS-3UTR GCA 90 bp AAGTCTCCTCATTTCAGCCAGTCTCAACACAAAACACCCAACAGGGATGCACTCGAGTCCAGGCCCCTCTaGCGTAAAACAGGCGGGAGG +
Preference number: 4 (lower is better)
Translates to: KSPHFSQSQHKTPNRDALESRPL*RKTGGR
Trigger: CCTCCCGCCTGTTTTACGGCAGAGGGGCCTGGACTC...GAGTGCATCCCTGTTGGGTGTTTTGTGTTGAGACTGGCTGAAATGAGGAGACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS-3UTR GCA 90 bp CTCAACTTGTTGGTTCCATGTGGAACTAGGTGGCAGGGCGAGAGGGAAAGTAGTGTCAGGGAGGGCAGCTaGCTTTGCCCTCATGGGAAT +
Preference number: 4 (lower is better)
Translates to: LNLLVPCGTRWQGERESSVREGS*LCPHGN
Trigger: ATTCCCATGAGGGCAAAGGCAGCTGCCCTCCCTGAC...ACTACTTTCCCTCTCGCCCTGCCACCTAGTTCCACATGGAACCAACAAGTTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS-3UTR GCA 90 bp TTCATACACGGTGCCCTGCTGGGGCTAGACTGGCAAAGGCTGGAAAGACACCCAGGGCTATGGTGTGTCTaGATTCAGTCCCCTCACATA +
Preference number: 4 (lower is better)
Translates to: FIHGALLGLDWQRLERHPGLWCV*IQSPHI
Trigger: TATGTGAGGGGACTGAATGCAGACACACCATAGCCC...TGGGTGTCTTTCCAGCCTTTGCCAGTCTAGCCCCAGCAGGGCACCGTGTATGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS-3UTR GCA 90 bp AGGGCCTGCAGAAGGGTGGATTATAGAAAAGGGAAGTGGGGGCAGACTCCAGGCACACATACACAGGCATaGCACATGACCCAGTTGAGG +
Preference number: 4 (lower is better)
Translates to: RACRRVDYRKGKWGQTPGTHTQA*HMTQLR
Trigger: CCTCAACTGGGTCATGTGGCATGCCTGTGTATGTGT...GCCTGGAGTCTGCCCCCACTTCCCTTTTCTATAATCCACCCTTCTGCAGGCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS-3UTR CCA 90 bp AACACAAAACACCCAACAGGGATGCACTCAACTTGTTGGTTCCATGTGGAACTATCCAGGGGACTGCTCTaGAGGCGGGCGGGACCGAGT +
Preference number: 4 (lower is better)
Translates to: NTKHPTGMHSTCWFHVELSRGLL*RRAGPS
Trigger: ACTCGGTCCCGCCCGCCTCCAGAGCAGTCCCCTGGA...TAGTTCCACATGGAACCAACAAGTTGAGTGCATCCCTGTTGGGTGTTTTGTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS-3UTR CCA 90 bp TTCATACACGGTGCCCTGCTGGGGCTAGACTGGCAAAGGCTGGAAAGACACCCATGGATGATTAGATGCTaGGTATGGGGACCAGGAGTG +
Preference number: 4 (lower is better)
Translates to: FIHGALLGLDWQRLERHPWMIRC*VWGPGV
Trigger: CACTCCTGGTCCCCATACCCAGCATCTAATCATCCA...TGGGTGTCTTTCCAGCCTTTGCCAGTCTAGCCCCAGCAGGGCACCGTGTATGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS-3UTR CCA 90 bp AGGGCCTGCAGAAGGGTGGATTATAGAAAAGGGAAGTGGGGGCAGACTCCAGGCTATAGAAAAGGGAAGTaGGGGCAGACTCCAGGCTTC +
Preference number: 4 (lower is better)
Translates to: RACRRVDYRKGKWGQTPGYRKGK*GQTPGF
Trigger: GAAGCCTGGAGTCTGCCCCCACTTCCCTTTTCTATA...GCCTGGAGTCTGCCCCCACTTCCCTTTTCTATAATCCACCCTTCTGCAGGCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS-3UTR CCA 90 bp AGGGCCTGCAGAAGGGTGGATTATAGAAAAGGGAAGTGGGGGCAGACTCCAGGCGTAGGCAAGAAGGGTTaGAGGGAGATTCAGCTCTTG +
Preference number: 4 (lower is better)
Translates to: RACRRVDYRKGKWGQTPGVGKKG*REIQLL
Trigger: CAAGAGCTGAATCTCCCTCCAACCCTTCTTGCCTAC...GCCTGGAGTCTGCCCCCACTTCCCTTTTCTATAATCCACCCTTCTGCAGGCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS-3UTR CCA 90 bp CTCAACTTGTTGGTTCCATGTGGAACTAGGTGGCAGGGCGAGAGGGAAAGTAGTGGTATCCAAGAGCTCTaGTGGGGTCCGTGTTGCACC +
Preference number: 4 (lower is better)
Translates to: LNLLVPCGTRWQGERESSGIQEL*WGPCCT
Trigger: GGTGCAACACGGACCCCACCAGAGCTCTTGGATACC...ACTACTTTCCCTCTCGCCCTGCCACCTAGTTCCACATGGAACCAACAAGTTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS-3UTR CCA 90 bp TTCATACACGGTGCCCTGCTGGGGCTAGACTGGCAAAGGCTGGAAAGACACCCAAGTAGAAGGGGGCTATaGTGTGTCTGCATTCAGTCC +
Preference number: 4 (lower is better)
Translates to: FIHGALLGLDWQRLERHPSRRGL*CVCIQS
Trigger: GGACTGAATGCAGACACACCATAGCCCCCTTCTACT...TGGGTGTCTTTCCAGCCTTTGCCAGTCTAGCCCCAGCAGGGCACCGTGTATGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS-3UTR TCA 90 bp AGGGCCTGCAGAAGGGTGGATTATAGAAAAGGGAAGTGGGGGCAGACTCCAGGCGGTTGCATAGGACTTTaGACTCTGGTTCCCTCATGT +
Preference number: 4 (lower is better)
Translates to: RACRRVDYRKGKWGQTPGGCIGL*TLVPSC
Trigger: ACATGAGGGAACCAGAGTTCAAAGTCCTATGCAACC...GCCTGGAGTCTGCCCCCACTTCCCTTTTCTATAATCCACCCTTCTGCAGGCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS-3UTR TCA 90 bp ATTCATACACGGTGCCCTGCTGGGGCTAGACTGGCAAAGGCTGGAAAGACACCCCAGGACCACAAAAGGTaGACCAATCTCCAGAGATTC +
Preference number: 4 (lower is better)
Translates to: IHTRCPAGARLAKAGKTPQDHKR*TNLQRF
Trigger: GAATCTCTGGAGATTGGTTCACCTTTTGTGGTCCTG...GGGTGTCTTTCCAGCCTTTGCCAGTCTAGCCCCAGCAGGGCACCGTGTATGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000374810.8
CDS-3UTR GCA 90 bp GGTGGTTGTCTCCTTGAGTCTGTTGACACGTCACATGGTCAAAGTCTCCTCATTACGGACATGCTGGGGTaGTCGATGAGGAGGTCCTCC +
Preference number: 4 (lower is better)
Translates to: GGCLLESVDTSHGQSLLITDMLG*SMRRSS
Trigger: GGAGGACCTCCTCATCGAGCACCCCAGCATGTCCGT...AATGAGGAGACTTTGACCATGTGACGTGTCAACAGACTCAAGGAGACAACCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS-3UTR CCA 90 bp AGGGCCTGCAGAAGGGTGGATTATAGAAAAGGGAAGTGGGGGCAGACTCCAGGCGTGAGACATGTAAGGTaGGAGTTGAAGGTGGGGAAT +
Preference number: 4 (lower is better)
Translates to: RACRRVDYRKGKWGQTPGVRHVR*ELKVGN
Trigger: ATTCCCCACCTTCAACTCCCACCTTACATGTCTCAC...GCCTGGAGTCTGCCCCCACTTCCCTTTTCTATAATCCACCCTTCTGCAGGCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS-3UTR CCA 90 bp CACGTCACATGGTCAAAGTCTCCTCATTTCAGCCAGTCTCAACACAAAACACCCCTACCTGGTCAGAGCTaGGCTCAGGGTCCCCACCAT +
Preference number: 4 (lower is better)
Translates to: HVTWSKSPHFSQSQHKTPLPGQS*AQGPHH
Trigger: ATGGTGGGGACCCTGAGCCCAGCTCTGACCAGGTAG...GGGTGTTTTGTGTTGAGACTGGCTGAAATGAGGAGACTTTGACCATGTGACGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS-3UTR CCA 90 bp GAATGCAGAGTTTTCTCCAAGCTTCAGCTTGGCTGTGAGGCCTGGAAACCTAGAACCCTGAGCCCTTACTaGAGGGCAATGACAGCAGCC +
Preference number: 4 (lower is better)
Translates to: ECRVFSKLQLGCEAWKPRTLSPY*RAMTAA
Trigger: GGCTGCTGTCATTGCCCTCCAGTAAGGGCTCAGGGT...TCTAGGTTTCCAGGCCTCACAGCCAAGCTGAAGCTTGGAGAAAACTCTGCATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
3UTR CAA 72 bp GGCATGCCACATGACCCAGTTGAGGTGGTTGTCTCCTaGAGTCTGTTGACACGTCACATGGTCAAAGTCTCC +
Preference number: 4 (lower is better)
Translates to: GMPHDPVEVVVS*SLLTRHMVKVS
Trigger: GGAGACTTTGACCATGTGACGTGTCAACAGACTCAAGGAGACAACCACCTCAACTGGGTCATGTGGCATGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS-3UTR TCA 90 bp TACTCACAAATTGATACAAACTCCTCTAGGGCCTCAGAAAACATCAATCAAAACGTCGCTCCGGGCTGCTaGGCTCGCCCGCGGGGCTTT +
Preference number: 4 (lower is better)
Translates to: YSQIDTNSSRASENINQNVAPGC*ARPRGF
Trigger: AAAGCCCCGCGGGCGAGCTCAGCAGCCCGGAGCGAC...GTTTTGATTGATGTTTTCTGAGGCCCTAGAGGAGTTTGTATCAATTTGTGAGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS-3UTR TCA 90 bp AACACAAAACACCCAACAGGGATGCACTCAACTTGTTGGTTCCATGTGGAACTATCAATTCCCCTTCGCTaGGGTCGCCGTCAGGCAGGG +
Preference number: 4 (lower is better)
Translates to: NTKHPTGMHSTCWFHVELSIPLR*GRRQAG
Trigger: CCCTGCCTGACGGCGACCTCAGCGAAGGGGAATTGA...TAGTTCCACATGGAACCAACAAGTTGAGTGCATCCCTGTTGGGTGTTTTGTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS-3UTR TCA 90 bp AAGTCTCCTCATTTCAGCCAGTCTCAACACAAAACACCCAACAGGGATGCACTCGGCACGGCTGGTAGATaGAGCTGCTCTGGTTCTTGG +
Preference number: 4 (lower is better)
Translates to: KSPHFSQSQHKTPNRDALGTAGR*SCSGSW
Trigger: CCAAGAACCAGAGCAGCTTCATCTACCAGCCGTGCC...GAGTGCATCCCTGTTGGGTGTTTTGTGTTGAGACTGGCTGAAATGAGGAGACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS-3UTR TCA 90 bp AGAGTTTTCTCCAAGCTTCAGCTTGGCTGTGAGGCCTGGAAACCTAGAGTTGGGAGTGAGGGTGAAGGGTaGATGGGTTCAGAGGCAGAT +
Preference number: 4 (lower is better)
Translates to: RVFSKLQLGCEAWKPRVGSEGEG*MGSEAD
Trigger: ATCTGCCTCTGAACCCATTCACCCTTCACCCTCACT...CCCAACTCTAGGTTTCCAGGCCTCACAGCCAAGCTGAAGCTTGGAGAAAACTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS-3UTR GCA 90 bp AAGTCTCCTCATTTCAGCCAGTCTCAACACAAAACACCCAACAGGGATGCACTCAGGATGGTAGGGCCTTaGCCAGCTTCTACTCGGGTG +
Preference number: 4 (lower is better)
Translates to: KSPHFSQSQHKTPNRDALRMVGP*PASTRV
Trigger: CACCCGAGTAGAAGCTGGGCAAGGCCCTACCATCCT...GAGTGCATCCCTGTTGGGTGTTTTGTGTTGAGACTGGCTGAAATGAGGAGACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS-3UTR GCA 90 bp ATTCATACACGGTGCCCTGCTGGGGCTAGACTGGCAAAGGCTGGAAAGACACCCAAAACAGCACCAAACTaGATTCATACACGGTGCCCT +
Preference number: 4 (lower is better)
Translates to: IHTRCPAGARLAKAGKTPKTAPN*IHTRCP
Trigger: AGGGCACCGTGTATGAATGCAGTTTGGTGCTGTTTT...GGGTGTCTTTCCAGCCTTTGCCAGTCTAGCCCCAGCAGGGCACCGTGTATGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS-3UTR CCA 90 bp AGAGTTTTCTCCAAGCTTCAGCTTGGCTGTGAGGCCTGGAAACCTAGAGTTGGGATTAGATGCTGGGTATaGGGACCAGGAGTGAGGGTG +
Preference number: 4 (lower is better)
Translates to: RVFSKLQLGCEAWKPRVGIRCWV*GPGVRV
Trigger: CACCCTCACTCCTGGTCCCCATACCCAGCATCTAAT...CCCAACTCTAGGTTTCCAGGCCTCACAGCCAAGCTGAAGCTTGGAGAAAACTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS-3UTR CCA 90 bp CACGTCACATGGTCAAAGTCTCCTCATTTCAGCCAGTCTCAACACAAAACACCCACCCTGAGCCCTTACTaGAGGGCAATGACAGCAGCC +
Preference number: 4 (lower is better)
Translates to: HVTWSKSPHFSQSQHKTPTLSPY*RAMTAA
Trigger: GGCTGCTGTCATTGCCCTCCAGTAAGGGCTCAGGGT...GGGTGTTTTGTGTTGAGACTGGCTGAAATGAGGAGACTTTGACCATGTGACGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS-3UTR CCA 90 bp CACGTCACATGGTCAAAGTCTCCTCATTTCAGCCAGTCTCAACACAAAACACCCCTGAGCTGTCAGCCTTaGGATGGCTTCACCCCATGG +
Preference number: 4 (lower is better)
Translates to: HVTWSKSPHFSQSQHKTPLSCQP*DGFTPW
Trigger: CCATGGGGTGAAGCCATCCCAAGGCTGACAGCTCAG...GGGTGTTTTGTGTTGAGACTGGCTGAAATGAGGAGACTTTGACCATGTGACGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS-3UTR CCA 90 bp CCCTGCTCCCTGCAGCTTCTCAACGTGTCTGTCCTGTCCGCATCTCCAATAGGCATGCACTCAACTTGTTaGTTCCATGTGGAACTAGGT +
Preference number: 4 (lower is better)
Translates to: PCSLQLLNVSVLSASPIGMHSTC*FHVELG
Trigger: ACCTAGTTCCACATGGAACCAACAAGTTGAGTGCAT...GCCTATTGGAGATGCGGACAGGACAGACACGTTGAGAAGCTGCAGGGAGCAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS-3UTR CCA 90 bp CCCTGCTCCCTGCAGCTTCTCAACGTGTCTGTCCTGTCCGCATCTCCAATAGGCAGGCAGCGATTTTATTaGACTCTAGGACTTCAAGGT +
Preference number: 4 (lower is better)
Translates to: PCSLQLLNVSVLSASPIGRQRFY*TLGLQG
Trigger: ACCTTGAAGTCCTAGAGTCCAATAAAATCGCTGCCT...GCCTATTGGAGATGCGGACAGGACAGACACGTTGAGAAGCTGCAGGGAGCAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374810.8
CDS-3UTR TCA 90 bp GCCAGTCTCAACACAAAACACCCAACAGGGATGCACTCAACTTGTTGGTTCCATAGGGTTTGGCCTCTCTaGGCAAGCACAGTGCACACT +
Preference number: 4 (lower is better)
Translates to: ASLNTKHPTGMHSTCWFHRVWPL*ASTVHT
Trigger: AGTGTGCACTGTGCTTGCTCAGAGAGGCCAAACCCT...ATGGAACCAACAAGTTGAGTGCATCCCTGTTGGGTGTTTTGTGTTGAGACTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS-3UTR TCA 90 bp GGTGGTTGTCTCCTTGAGTCTGTTGACACGTCACATGGTCAAAGTCTCCTCATTAGGCAAGGTGAAGACTaGGCTGTCAGCCTTGGGATG +
Preference number: 4 (lower is better)
Translates to: GGCLLESVDTSHGQSLLIRQGED*AVSLGM
Trigger: CATCCCAAGGCTGACAGCTCAGTCTTCACCTTGCCT...AATGAGGAGACTTTGACCATGTGACGTGTCAACAGACTCAAGGAGACAACCACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS-3UTR GCA 90 bp AACACAAAACACCCAACAGGGATGCACTCAACTTGTTGGTTCCATGTGGAACTAACGGACATGCTGGGGTaGTCGATGAGGAGGTCCTCC +
Preference number: 4 (lower is better)
Translates to: NTKHPTGMHSTCWFHVELTDMLG*SMRRSS
Trigger: GGAGGACCTCCTCATCGAGCACCCCAGCATGTCCGT...TAGTTCCACATGGAACCAACAAGTTGAGTGCATCCCTGTTGGGTGTTTTGTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS-3UTR GCA 90 bp CACGTCACATGGTCAAAGTCTCCTCATTTCAGCCAGTCTCAACACAAAACACCCTCTGAGCAAGCACAGTaGACACTCCCTTGGTGCCCT +
Preference number: 4 (lower is better)
Translates to: HVTWSKSPHFSQSQHKTPSEQAQ*TLPWCP
Trigger: AGGGCACCAAGGGAGTGTGCACTGTGCTTGCTCAGA...GGGTGTTTTGTGTTGAGACTGGCTGAAATGAGGAGACTTTGACCATGTGACGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS-3UTR GCA 90 bp GCCAGTCTCAACACAAAACACCCAACAGGGATGCACTCAACTTGTTGGTTCCATAGGCTGGCTGTGAAGTaGCCAAGTGGTAGCTGGAAG +
Preference number: 4 (lower is better)
Translates to: ASLNTKHPTGMHSTCWFHRLAVK*PSGSWK
Trigger: CTTCCAGCTACCACTTGGGCACTTCACAGCCAGCCT...ATGGAACCAACAAGTTGAGTGCATCCCTGTTGGGTGTTTTGTGTTGAGACTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS-3UTR CCA 90 bp TACTCACAAATTGATACAAACTCCTCTAGGGCCTCAGAAAACATCAATCAAAACTGCAGCCGCCGCACCTaGCCCGCCTTCTCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: YSQIDTNSSRASENINQNCSRRT*PAFSSS
Trigger: GCTGCTGGAGAAGGCGGGCCAGGTGCGGCGGCTGCA...GTTTTGATTGATGTTTTCTGAGGCCCTAGAGGAGTTTGTATCAATTTGTGAGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS-3UTR CCA 90 bp CACGTCACATGGTCAAAGTCTCCTCATTTCAGCCAGTCTCAACACAAAACACCCTGCCTAGAAGCCCTGTaGCCTGCATGTCTCCTAAGC +
Preference number: 4 (lower is better)
Translates to: HVTWSKSPHFSQSQHKTPCLEAL*PACLLS
Trigger: GCTTAGGAGACATGCAGGCCACAGGGCTTCTAGGCA...GGGTGTTTTGTGTTGAGACTGGCTGAAATGAGGAGACTTTGACCATGTGACGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS-3UTR CCA 90 bp CACGTCACATGGTCAAAGTCTCCTCATTTCAGCCAGTCTCAACACAAAACACCCCCTACTCAGGACTGCTaGCTAGCCATACTGAGCAGG +
Preference number: 4 (lower is better)
Translates to: HVTWSKSPHFSQSQHKTPPTQDC*LAILSR
Trigger: CCTGCTCAGTATGGCTAGCCAGCAGTCCTGAGTAGG...GGGTGTTTTGTGTTGAGACTGGCTGAAATGAGGAGACTTTGACCATGTGACGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS-3UTR CCA 90 bp GCCAGTCTCAACACAAAACACCCAACAGGGATGCACTCAACTTGTTGGTTCCATCCTACTCAGGACTGCTaGCTAGCCATACTGAGCAGG +
Preference number: 4 (lower is better)
Translates to: ASLNTKHPTGMHSTCWFHPTQDC*LAILSR
Trigger: CCTGCTCAGTATGGCTAGCCAGCAGTCCTGAGTAGG...ATGGAACCAACAAGTTGAGTGCATCCCTGTTGGGTGTTTTGTGTTGAGACTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS-3UTR CCA 90 bp GGTGGTTGTCTCCTTGAGTCTGTTGACACGTCACATGGTCAAAGTCTCCTCATTAGACAGTGGGAGTCCTaGACTCCTACTCAGGACTGC +
Preference number: 4 (lower is better)
Translates to: GGCLLESVDTSHGQSLLIRQWES*TPTQDC
Trigger: GCAGTCCTGAGTAGGAGTCCAGGACTCCCACTGTCT...AATGAGGAGACTTTGACCATGTGACGTGTCAACAGACTCAAGGAGACAACCACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS-3UTR CCA 90 bp CACGTCACATGGTCAAAGTCTCCTCATTTCAGCCAGTCTCAACACAAAACACCCCCACCAGAAGGATCATaGGCACCACACAGGACTGAG +
Preference number: 4 (lower is better)
Translates to: HVTWSKSPHFSQSQHKTPPPEGS*APHRTE
Trigger: CTCAGTCCTGTGTGGTGCCCATGATCCTTCTGGTGG...GGGTGTTTTGTGTTGAGACTGGCTGAAATGAGGAGACTTTGACCATGTGACGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS-3UTR CCA 90 bp GGTGGTTGTCTCCTTGAGTCTGTTGACACGTCACATGGTCAAAGTCTCCTCATTCTGCTGGGGCTAGACTaGCAAAGGCTGGAAAGACAC +
Preference number: 4 (lower is better)
Translates to: GGCLLESVDTSHGQSLLILLGLD*QRLERH
Trigger: GTGTCTTTCCAGCCTTTGCCAGTCTAGCCCCAGCAG...AATGAGGAGACTTTGACCATGTGACGTGTCAACAGACTCAAGGAGACAACCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS-3UTR CCA 90 bp AGAGTTTTCTCCAAGCTTCAGCTTGGCTGTGAGGCCTGGAAACCTAGAGTTGGGAGTAGAAGGGGGCTATaGTGTGTCTGCATTCAGTCC +
Preference number: 4 (lower is better)
Translates to: RVFSKLQLGCEAWKPRVGSRRGL*CVCIQS
Trigger: GGACTGAATGCAGACACACCATAGCCCCCTTCTACT...CCCAACTCTAGGTTTCCAGGCCTCACAGCCAAGCTGAAGCTTGGAGAAAACTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS-3UTR CCA 90 bp AAGTCTCCTCATTTCAGCCAGTCTCAACACAAAACACCCAACAGGGATGCACTCCCATGTGGAACTAGGTaGCAGGGCGAGAGGGAAAGT +
Preference number: 4 (lower is better)
Translates to: KSPHFSQSQHKTPNRDALPCGTR*QGERES
Trigger: ACTTTCCCTCTCGCCCTGCCACCTAGTTCCACATGG...GAGTGCATCCCTGTTGGGTGTTTTGTGTTGAGACTGGCTGAAATGAGGAGACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS-3UTR TCA 90 bp AACACAAAACACCCAACAGGGATGCACTCAACTTGTTGGTTCCATGTGGAACTACTATGGTGCTGCCGGTaGCGTAAACGGACATGCTGG +
Preference number: 4 (lower is better)
Translates to: NTKHPTGMHSTCWFHVELLWCCR*RKRTCW
Trigger: CCAGCATGTCCGTTTACGTCACCGGCAGCACCATAG...TAGTTCCACATGGAACCAACAAGTTGAGTGCATCCCTGTTGGGTGTTTTGTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS-3UTR TCA 90 bp AACACAAAACACCCAACAGGGATGCACTCAACTTGTTGGTTCCATGTGGAACTAGGCACGGCTGGTAGATaGAGCTGCTCTGGTTCTTGG +
Preference number: 4 (lower is better)
Translates to: NTKHPTGMHSTCWFHVELGTAGR*SCSGSW
Trigger: CCAAGAACCAGAGCAGCTTCATCTACCAGCCGTGCC...TAGTTCCACATGGAACCAACAAGTTGAGTGCATCCCTGTTGGGTGTTTTGTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS-3UTR TCA 90 bp GAATGCAGAGTTTTCTCCAAGCTTCAGCTTGGCTGTGAGGCCTGGAAACCTAGACAGTATGACAAGGGCTaGTGCTTCAGGAGTCAGACT +
Preference number: 4 (lower is better)
Translates to: ECRVFSKLQLGCEAWKPRQYDKG*CFRSQT
Trigger: AGTCTGACTCCTGAAGCATCAGCCCTTGTCATACTG...TCTAGGTTTCCAGGCCTCACAGCCAAGCTGAAGCTTGGAGAAAACTCTGCATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS-3UTR TCA 90 bp AAGTCTCCTCATTTCAGCCAGTCTCAACACAAAACACCCAACAGGGATGCACTCGACTTCAAGGTACAGTaGGGACAGAAGGGGTCAGGA +
Preference number: 4 (lower is better)
Translates to: KSPHFSQSQHKTPNRDALDFKVQ*GQKGSG
Trigger: TCCTGACCCCTTCTGTCCTCACTGTACCTTGAAGTC...GAGTGCATCCCTGTTGGGTGTTTTGTGTTGAGACTGGCTGAAATGAGGAGACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374810.8
CDS-3UTR GCA 90 bp ATCAATCAAAACAGACTCTCTAACCCCCTCCTAAGGTTGCATAGGACTTTGAACTGCACACTCCCTTGGTaGCCTGCTCCCTGCAGCTTC +
Preference number: 4 (lower is better)
Translates to: INQNRLSNPLLRLHRTLNCTLPW*PAPCSF
Trigger: GAAGCTGCAGGGAGCAGGGCACCAAGGGAGTGTGCA...GTTCAAAGTCCTATGCAACCTTAGGAGGGGGTTAGAGAGTCTGTTTTGATTGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS-3UTR GCA 90 bp AACACAAAACACCCAACAGGGATGCACTCAACTTGTTGGTTCCATGTGGAACTAGAGGGCAGCTGCCTTTaGCCTCATGGGAATGCAGAG +
Preference number: 4 (lower is better)
Translates to: NTKHPTGMHSTCWFHVELEGSCL*PHGNAE
Trigger: CTCTGCATTCCCATGAGGGCAAAGGCAGCTGCCCTC...TAGTTCCACATGGAACCAACAAGTTGAGTGCATCCCTGTTGGGTGTTTTGTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS-3UTR CCA 90 bp AACACAAAACACCCAACAGGGATGCACTCAACTTGTTGGTTCCATGTGGAACTAAAGGCTGTCAACTACTaGGGCCCTAGTGGACTGGCG +
Preference number: 4 (lower is better)
Translates to: NTKHPTGMHSTCWFHVELKAVNY*GPSGLA
Trigger: CGCCAGTCCACTAGGGCCCCAGTAGTTGACAGCCTT...TAGTTCCACATGGAACCAACAAGTTGAGTGCATCCCTGTTGGGTGTTTTGTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS-3UTR TCA 90 bp AACACAAAACACCCAACAGGGATGCACTCAACTTGTTGGTTCCATGTGGAACTAGTTGAAGGTGGGGAATaGGCCAGATCAGGGACTGGA +
Preference number: 4 (lower is better)
Translates to: NTKHPTGMHSTCWFHVELVEGGE*ARSGTG
Trigger: TCCAGTCCCTGATCTGGCTCATTCCCCACCTTCAAC...TAGTTCCACATGGAACCAACAAGTTGAGTGCATCCCTGTTGGGTGTTTTGTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS-3UTR TCA 90 bp ATCAATCAAAACAGACTCTCTAACCCCCTCCTAAGGTTGCATAGGACTTTGAACAGCACCTTGGGCTTGTaGACAGACGGCCAGGATGGT +
Preference number: 4 (lower is better)
Translates to: INQNRLSNPLLRLHRTLNSTLGL*TDGQDG
Trigger: ACCATCCTGGCCGTCTGTTCACAAGCCCAAGGTGCT...GTTCAAAGTCCTATGCAACCTTAGGAGGGGGTTAGAGAGTCTGTTTTGATTGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS-3UTR TCA 90 bp GGTGGTTGTCTCCTTGAGTCTGTTGACACGTCACATGGTCAAAGTCTCCTCATTGCTGTTGCTGGTGTCTaGGCCCAAAATTCAGTCTCA +
Preference number: 4 (lower is better)
Translates to: GGCLLESVDTSHGQSLLIAVAGV*AQNSVS
Trigger: TGAGACTGAATTTTGGGCTCAGACACCAGCAACAGC...AATGAGGAGACTTTGACCATGTGACGTGTCAACAGACTCAAGGAGACAACCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS-3UTR TCA 90 bp CACGTCACATGGTCAAAGTCTCCTCATTTCAGCCAGTCTCAACACAAAACACCCGCTGTTGCTGGTGTCTaGGCCCAAAATTCAGTCTCA +
Preference number: 4 (lower is better)
Translates to: HVTWSKSPHFSQSQHKTPAVAGV*AQNSVS
Trigger: TGAGACTGAATTTTGGGCTCAGACACCAGCAACAGC...GGGTGTTTTGTGTTGAGACTGGCTGAAATGAGGAGACTTTGACCATGTGACGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS-3UTR TCA 90 bp GGTGGTTGTCTCCTTGAGTCTGTTGACACGTCACATGGTCAAAGTCTCCTCATTCAGTATGACAAGGGCTaGTGCTTCAGGAGTCAGACT +
Preference number: 4 (lower is better)
Translates to: GGCLLESVDTSHGQSLLIQYDKG*CFRSQT
Trigger: AGTCTGACTCCTGAAGCATCAGCCCTTGTCATACTG...AATGAGGAGACTTTGACCATGTGACGTGTCAACAGACTCAAGGAGACAACCACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS-3UTR TCA 90 bp GCCAGTCTCAACACAAAACACCCAACAGGGATGCACTCAACTTGTTGGTTCCATGAAGCATGCTCAAGGTaGAAGGCACGTACACAGTCA +
Preference number: 4 (lower is better)
Translates to: ASLNTKHPTGMHSTCWFHEACSR*KARTQS
Trigger: TGACTGTGTACGTGCCTTTCACCTTGAGCATGCTTC...ATGGAACCAACAAGTTGAGTGCATCCCTGTTGGGTGTTTTGTGTTGAGACTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS-3UTR GCA 90 bp AAGTCTCCTCATTTCAGCCAGTCTCAACACAAAACACCCAACAGGGATGCACTCAGAAGCCCTGTGGCCTaGATGTCTCCTAAGCTAGTT +
Preference number: 4 (lower is better)
Translates to: KSPHFSQSQHKTPNRDALRSPVA*MSPKLV
Trigger: AACTAGCTTAGGAGACATGCAGGCCACAGGGCTTCT...GAGTGCATCCCTGTTGGGTGTTTTGTGTTGAGACTGGCTGAAATGAGGAGACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS-3UTR GCA 90 bp GGTGGTTGTCTCCTTGAGTCTGTTGACACGTCACATGGTCAAAGTCTCCTCATTATCCCAAGAGGCTGTTaGTGGTGTCTGAGCCCAAAA +
Preference number: 4 (lower is better)
Translates to: GGCLLESVDTSHGQSLLIIPRGC*WCLSPK
Trigger: TTTTGGGCTCAGACACCAGCAACAGCCTCTTGGGAT...AATGAGGAGACTTTGACCATGTGACGTGTCAACAGACTCAAGGAGACAACCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS-3UTR GCA 90 bp CACGTCACATGGTCAAAGTCTCCTCATTTCAGCCAGTCTCAACACAAAACACCCATCCCAAGAGGCTGTTaGTGGTGTCTGAGCCCAAAA +
Preference number: 4 (lower is better)
Translates to: HVTWSKSPHFSQSQHKTPIPRGC*WCLSPK
Trigger: TTTTGGGCTCAGACACCAGCAACAGCCTCTTGGGAT...GGGTGTTTTGTGTTGAGACTGGCTGAAATGAGGAGACTTTGACCATGTGACGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS-3UTR GCA 90 bp GCCAGTCTCAACACAAAACACCCAACAGGGATGCACTCAACTTGTTGGTTCCATGGGCTATGGTGTGTCTaGATTCAGTCCCCTCACATA +
Preference number: 4 (lower is better)
Translates to: ASLNTKHPTGMHSTCWFHGLWCV*IQSPHI
Trigger: TATGTGAGGGGACTGAATGCAGACACACCATAGCCC...ATGGAACCAACAAGTTGAGTGCATCCCTGTTGGGTGTTTTGTGTTGAGACTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS-3UTR GCA 90 bp GAATGCAGAGTTTTCTCCAAGCTTCAGCTTGGCTGTGAGGCCTGGAAACCTAGAAACACCCAACAGGGATaGACTCAACTTGTTGGTTCC +
Preference number: 4 (lower is better)
Translates to: ECRVFSKLQLGCEAWKPRNTQQG*TQLVGS
Trigger: GGAACCAACAAGTTGAGTGCATCCCTGTTGGGTGTT...TCTAGGTTTCCAGGCCTCACAGCCAAGCTGAAGCTTGGAGAAAACTCTGCATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS-3UTR CCA 90 bp GAATGCAGAGTTTTCTCCAAGCTTCAGCTTGGCTGTGAGGCCTGGAAACCTAGAAGGGTGAAGGGTGAATaGGTTCAGAGGCAGATTAGA +
Preference number: 4 (lower is better)
Translates to: ECRVFSKLQLGCEAWKPRRVKGE*VQRQIR
Trigger: TCTAATCTGCCTCTGAACCCATTCACCCTTCACCCT...TCTAGGTTTCCAGGCCTCACAGCCAAGCTGAAGCTTGGAGAAAACTCTGCATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS-3UTR CCA 90 bp GCCAGTCTCAACACAAAACACCCAACAGGGATGCACTCAACTTGTTGGTTCCATTGGATGATTAGATGCTaGGTATGGGGACCAGGAGTG +
Preference number: 4 (lower is better)
Translates to: ASLNTKHPTGMHSTCWFHWMIRC*VWGPGV
Trigger: CACTCCTGGTCCCCATACCCAGCATCTAATCATCCA...ATGGAACCAACAAGTTGAGTGCATCCCTGTTGGGTGTTTTGTGTTGAGACTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS-3UTR CCA 90 bp AACACAAAACACCCAACAGGGATGCACTCAACTTGTTGGTTCCATGTGGAACTATCATCCCAGCATCCATaGGGATACCCCATCCCTTCC +
Preference number: 4 (lower is better)
Translates to: NTKHPTGMHSTCWFHVELSSQHP*GYPIPS
Trigger: GGAAGGGATGGGGTATCCCCATGGATGCTGGGATGA...TAGTTCCACATGGAACCAACAAGTTGAGTGCATCCCTGTTGGGTGTTTTGTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS-3UTR CCA 90 bp CTCAACTTGTTGGTTCCATGTGGAACTAGGTGGCAGGGCGAGAGGGAAAGTAGTATTTGGCTTATTCCCTaGAATAGGAGACCCCATCAG +
Preference number: 4 (lower is better)
Translates to: LNLLVPCGTRWQGERESSIWLIP*NRRPHQ
Trigger: CTGATGGGGTCTCCTATTCCAGGGAATAAGCCAAAT...ACTACTTTCCCTCTCGCCCTGCCACCTAGTTCCACATGGAACCAACAAGTTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS-3UTR CCA 90 bp CTCAACTTGTTGGTTCCATGTGGAACTAGGTGGCAGGGCGAGAGGGAAAGTAGTACCACTCAGACTTACTaGGGAATAACTGGAAGTCAC +
Preference number: 4 (lower is better)
Translates to: LNLLVPCGTRWQGERESSTTQTY*GITGSH
Trigger: GTGACTTCCAGTTATTCCCCAGTAAGTCTGAGTGGT...ACTACTTTCCCTCTCGCCCTGCCACCTAGTTCCACATGGAACCAACAAGTTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS-3UTR CCA 90 bp AGAGTTTTCTCCAAGCTTCAGCTTGGCTGTGAGGCCTGGAAACCTAGAGTTGGGTGTGATCCAAACAGCTaGGAGGCAGCGATTTTATTG +
Preference number: 4 (lower is better)
Translates to: RVFSKLQLGCEAWKPRVGCDPNS*EAAILL
Trigger: CAATAAAATCGCTGCCTCCCAGCTGTTTGGATCACA...CCCAACTCTAGGTTTCCAGGCCTCACAGCCAAGCTGAAGCTTGGAGAAAACTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374810.8
3UTR CAA 72 bp CATGACCCAGTTGAGGTGGTTGTCTCCTTGAGTCTGTaGACACGTCACATGGTCAAAGTCTCCTCATTTCAG +
Preference number: 4 (lower is better)
Translates to: HDPVEVVVSLSL*TRHMVKVSSFQ
Trigger: CTGAAATGAGGAGACTTTGACCATGTGACGTGTCAACAGACTCAAGGAGACAACCACCTCAACTGGGTCATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS-3UTR TCA 90 bp AACACAAAACACCCAACAGGGATGCACTCAACTTGTTGGTTCCATGTGGAACTAAGTAGGGGGCATGGATaGTTAGATGCTGGGTATGGG +
Preference number: 4 (lower is better)
Translates to: NTKHPTGMHSTCWFHVELSRGHG*LDAGYG
Trigger: CCCATACCCAGCATCTAATCATCCATGCCCCCTACT...TAGTTCCACATGGAACCAACAAGTTGAGTGCATCCCTGTTGGGTGTTTTGTGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS-3UTR TCA 90 bp AAGTCTCCTCATTTCAGCCAGTCTCAACACAAAACACCCAACAGGGATGCACTCAAAGCAACTAGGTTCTaGAGGAGAACTTGGGAGAGG +
Preference number: 4 (lower is better)
Translates to: KSPHFSQSQHKTPNRDALKATRF*RRTWER
Trigger: CCTCTCCCAAGTTCTCCTTCAGAACCTAGTTGCTTT...GAGTGCATCCCTGTTGGGTGTTTTGTGTTGAGACTGGCTGAAATGAGGAGACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS-3UTR TCA 90 bp AAGTCTCCTCATTTCAGCCAGTCTCAACACAAAACACCCAACAGGGATGCACTCCTGGAAGTCACTGTTTaGTGTAACTGGGACTCACTC +
Preference number: 4 (lower is better)
Translates to: KSPHFSQSQHKTPNRDALLEVTV*CNWDSL
Trigger: GAGTGAGTCCCAGTTACATCAAACAGTGACTTCCAG...GAGTGCATCCCTGTTGGGTGTTTTGTGTTGAGACTGGCTGAAATGAGGAGACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS-3UTR GCA 90 bp CACGTCACATGGTCAAAGTCTCCTCATTTCAGCCAGTCTCAACACAAAACACCCAACACCCAACAGGGATaGACTCAACTTGTTGGTTCC +
Preference number: 4 (lower is better)
Translates to: HVTWSKSPHFSQSQHKTPNTQQG*TQLVGS
Trigger: GGAACCAACAAGTTGAGTGCATCCCTGTTGGGTGTT...GGGTGTTTTGTGTTGAGACTGGCTGAAATGAGGAGACTTTGACCATGTGACGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS-3UTR CCA 90 bp GCCAGTCTCAACACAAAACACCCAACAGGGATGCACTCAACTTGTTGGTTCCATAGGGTGAAGGGTGAATaGGTTCAGAGGCAGATTAGA +
Preference number: 4 (lower is better)
Translates to: ASLNTKHPTGMHSTCWFHRVKGE*VQRQIR
Trigger: TCTAATCTGCCTCTGAACCCATTCACCCTTCACCCT...ATGGAACCAACAAGTTGAGTGCATCCCTGTTGGGTGTTTTGTGTTGAGACTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS-3UTR CCA 90 bp ATCAATCAAAACAGACTCTCTAACCCCCTCCTAAGGTTGCATAGGACTTTGAACAGACAGTGGGAGTCCTaGACTCCTACTCAGGACTGC +
Preference number: 4 (lower is better)
Translates to: INQNRLSNPLLRLHRTLNRQWES*TPTQDC
Trigger: GCAGTCCTGAGTAGGAGTCCAGGACTCCCACTGTCT...GTTCAAAGTCCTATGCAACCTTAGGAGGGGGTTAGAGAGTCTGTTTTGATTGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS-3UTR CCA 90 bp TACTCACAAATTGATACAAACTCCTCTAGGGCCTCAGAAAACATCAATCAAAACGGGGCCCTAGTGGACTaGCGTGGGAGCTTTGATCCG +
Preference number: 4 (lower is better)
Translates to: YSQIDTNSSRASENINQNGALVD*RGSFDP
Trigger: CGGATCAAAGCTCCCACGCCAGTCCACTAGGGCCCC...GTTTTGATTGATGTTTTCTGAGGCCCTAGAGGAGTTTGTATCAATTTGTGAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS-3UTR CCA 90 bp AGAGTTTTCTCCAAGCTTCAGCTTGGCTGTGAGGCCTGGAAACCTAGAGTTGGGATGCACTCAACTTGTTaGTTCCATGTGGAACTAGGT +
Preference number: 4 (lower is better)
Translates to: RVFSKLQLGCEAWKPRVGMHSTC*FHVELG
Trigger: ACCTAGTTCCACATGGAACCAACAAGTTGAGTGCAT...CCCAACTCTAGGTTTCCAGGCCTCACAGCCAAGCTGAAGCTTGGAGAAAACTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS-3UTR TCA 90 bp GCCAGTCTCAACACAAAACACCCAACAGGGATGCACTCAACTTGTTGGTTCCATCTGGCGTGGGAGCTTTaGTCCGTTTTTAGTGTTAAT +
Preference number: 4 (lower is better)
Translates to: ASLNTKHPTGMHSTCWFHLAWEL*SVFSVN
Trigger: ATTAACACTAAAAACGGATCAAAGCTCCCACGCCAG...ATGGAACCAACAAGTTGAGTGCATCCCTGTTGGGTGTTTTGTGTTGAGACTGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS-3UTR TCA 90 bp GGTGGTTGTCTCCTTGAGTCTGTTGACACGTCACATGGTCAAAGTCTCCTCATTAGACTAGCAGGAGACTaGGTAGTGTTGGTTCTTAGA +
Preference number: 4 (lower is better)
Translates to: GGCLLESVDTSHGQSLLIRLAGD*VVLVLR
Trigger: TCTAAGAACCAACACTACTCAGTCTCCTGCTAGTCT...AATGAGGAGACTTTGACCATGTGACGTGTCAACAGACTCAAGGAGACAACCACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS-3UTR TCA 90 bp CACGTCACATGGTCAAAGTCTCCTCATTTCAGCCAGTCTCAACACAAAACACCCACAGTCAATACAGTATaGCAAGGGCTGATGCTTCAG +
Preference number: 4 (lower is better)
Translates to: HVTWSKSPHFSQSQHKTPTVNTV*QGLMLQ
Trigger: CTGAAGCATCAGCCCTTGTCATACTGTATTGACTGT...GGGTGTTTTGTGTTGAGACTGGCTGAAATGAGGAGACTTTGACCATGTGACGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS-3UTR GCA 90 bp GGTGGTTGTCTCCTTGAGTCTGTTGACACGTCACATGGTCAAAGTCTCCTCATTTCAGATTTCAGGGCCTaGAGAAGGGTGGATTATAGA +
Preference number: 4 (lower is better)
Translates to: GGCLLESVDTSHGQSLLISDFRA*RRVDYR
Trigger: TCTATAATCCACCCTTCTGCAGGCCCTGAAATCTGA...AATGAGGAGACTTTGACCATGTGACGTGTCAACAGACTCAAGGAGACAACCACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS-3UTR GCA 90 bp AAGTCTCCTCATTTCAGCCAGTCTCAACACAAAACACCCAACAGGGATGCACTCTCAGATTTCAGGGCCTaGAGAAGGGTGGATTATAGA +
Preference number: 4 (lower is better)
Translates to: KSPHFSQSQHKTPNRDALSDFRA*RRVDYR
Trigger: TCTATAATCCACCCTTCTGCAGGCCCTGAAATCTGA...GAGTGCATCCCTGTTGGGTGTTTTGTGTTGAGACTGGCTGAAATGAGGAGACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS-3UTR GCA 90 bp ATCAATCAAAACAGACTCTCTAACCCCCTCCTAAGGTTGCATAGGACTTTGAACACTCCTACTCAGGACTaGTGGCTAGCCATACTGAGC +
Preference number: 4 (lower is better)
Translates to: INQNRLSNPLLRLHRTLNTPTQD*WLAILS
Trigger: GCTCAGTATGGCTAGCCAGCAGTCCTGAGTAGGAGT...GTTCAAAGTCCTATGCAACCTTAGGAGGGGGTTAGAGAGTCTGTTTTGATTGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS-3UTR GCA 90 bp GGTGGTTGTCTCCTTGAGTCTGTTGACACGTCACATGGTCAAAGTCTCCTCATTTTGCCCTCATGGGAATaGAGAGTTTTCTCCAAGCTT +
Preference number: 4 (lower is better)
Translates to: GGCLLESVDTSHGQSLLILPSWE*RVFSKL
Trigger: AAGCTTGGAGAAAACTCTGCATTCCCATGAGGGCAA...AATGAGGAGACTTTGACCATGTGACGTGTCAACAGACTCAAGGAGACAACCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS-3UTR CCA 90 bp AACACAAAACACCCAACAGGGATGCACTCAACTTGTTGGTTCCATGTGGAACTATATAGAAAAGGGAAGTaGGGGCAGACTCCAGGCTTC +
Preference number: 4 (lower is better)
Translates to: NTKHPTGMHSTCWFHVELYRKGK*GQTPGF
Trigger: GAAGCCTGGAGTCTGCCCCCACTTCCCTTTTCTATA...TAGTTCCACATGGAACCAACAAGTTGAGTGCATCCCTGTTGGGTGTTTTGTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS-3UTR CCA 90 bp ATCAATCAAAACAGACTCTCTAACCCCCTCCTAAGGTTGCATAGGACTTTGAACCTAGTTCTAGCACCTTaGGCTTGTGAACAGACGGCC +
Preference number: 4 (lower is better)
Translates to: INQNRLSNPLLRLHRTLNLVLAP*ACEQTA
Trigger: GGCCGTCTGTTCACAAGCCCAAGGTGCTAGAACTAG...GTTCAAAGTCCTATGCAACCTTAGGAGGGGGTTAGAGAGTCTGTTTTGATTGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS-3UTR CCA 90 bp GCCAGTCTCAACACAAAACACCCAACAGGGATGCACTCAACTTGTTGGTTCCATATTTGGCTTATTCCCTaGAATAGGAGACCCCATCAG +
Preference number: 4 (lower is better)
Translates to: ASLNTKHPTGMHSTCWFHIWLIP*NRRPHQ
Trigger: CTGATGGGGTCTCCTATTCCAGGGAATAAGCCAAAT...ATGGAACCAACAAGTTGAGTGCATCCCTGTTGGGTGTTTTGTGTTGAGACTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS-3UTR CCA 90 bp AATACTCACAAATTGATACAAACTCCTCTAGGGCCTCAGAAAACATCAATCAAAGGGGCCCTAGTGGACTaGCGTGGGAGCTTTGATCCG +
Preference number: 4 (lower is better)
Translates to: NTHKLIQTPLGPQKTSIKGALVD*RGSFDP
Trigger: CGGATCAAAGCTCCCACGCCAGTCCACTAGGGCCCC...TTTGATTGATGTTTTCTGAGGCCCTAGAGGAGTTTGTATCAATTTGTGAGTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS-3UTR TCA 90 bp AACACAAAACACCCAACAGGGATGCACTCAACTTGTTGGTTCCATGTGGAACTAAAAGCAACTAGGTTCTaGAGGAGAACTTGGGAGAGG +
Preference number: 4 (lower is better)
Translates to: NTKHPTGMHSTCWFHVELKATRF*RRTWER
Trigger: CCTCTCCCAAGTTCTCCTTCAGAACCTAGTTGCTTT...TAGTTCCACATGGAACCAACAAGTTGAGTGCATCCCTGTTGGGTGTTTTGTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS-3UTR TCA 90 bp TACTCACAAATTGATACAAACTCCTCTAGGGCCTCAGAAAACATCAATCAAAACACCCTAGGCTGGCTGTaGAGTGCCCAAGTGGTAGCT +
Preference number: 4 (lower is better)
Translates to: YSQIDTNSSRASENINQNTLGWL*SAQVVA
Trigger: AGCTACCACTTGGGCACTTCACAGCCAGCCTAGGGT...GTTTTGATTGATGTTTTCTGAGGCCCTAGAGGAGTTTGTATCAATTTGTGAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS-3UTR GCA 90 bp ATCAATCAAAACAGACTCTCTAACCCCCTCCTAAGGTTGCATAGGACTTTGAACACACATACACAGGCATaGCACATGACCCAGTTGAGG +
Preference number: 4 (lower is better)
Translates to: INQNRLSNPLLRLHRTLNTHTQA*HMTQLR
Trigger: CCTCAACTGGGTCATGTGGCATGCCTGTGTATGTGT...GTTCAAAGTCCTATGCAACCTTAGGAGGGGGTTAGAGAGTCTGTTTTGATTGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS-3UTR CCA 90 bp ATCAATCAAAACAGACTCTCTAACCCCCTCCTAAGGTTGCATAGGACTTTGAACCTGCCTTTGCCCTCATaGGAATGCAGAGTTTTCTCC +
Preference number: 4 (lower is better)
Translates to: INQNRLSNPLLRLHRTLNLPLPS*ECRVFS
Trigger: GGAGAAAACTCTGCATTCCCATGAGGGCAAAGGCAG...GTTCAAAGTCCTATGCAACCTTAGGAGGGGGTTAGAGAGTCTGTTTTGATTGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS-3UTR CCA 90 bp ATCAATCAAAACAGACTCTCTAACCCCCTCCTAAGGTTGCATAGGACTTTGAACGTAGGCAAGAAGGGTTaGAGGGAGATTCAGCTCTTG +
Preference number: 4 (lower is better)
Translates to: INQNRLSNPLLRLHRTLNVGKKG*REIQLL
Trigger: CAAGAGCTGAATCTCCCTCCAACCCTTCTTGCCTAC...GTTCAAAGTCCTATGCAACCTTAGGAGGGGGTTAGAGAGTCTGTTTTGATTGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS-3UTR TCA 90 bp AACACAAAACACCCAACAGGGATGCACTCAACTTGTTGGTTCCATGTGGAACTAACAGTCAATACAGTATaGCAAGGGCTGATGCTTCAG +
Preference number: 4 (lower is better)
Translates to: NTKHPTGMHSTCWFHVELTVNTV*QGLMLQ
Trigger: CTGAAGCATCAGCCCTTGTCATACTGTATTGACTGT...TAGTTCCACATGGAACCAACAAGTTGAGTGCATCCCTGTTGGGTGTTTTGTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS-3UTR GCA 90 bp TACTCACAAATTGATACAAACTCCTCTAGGGCCTCAGAAAACATCAATCAAAACTGCATTCATACACGGTaGCCTGCTGGGGCTAGACTG +
Preference number: 4 (lower is better)
Translates to: YSQIDTNSSRASENINQNCIHTR*PAGARL
Trigger: CAGTCTAGCCCCAGCAGGGCACCGTGTATGAATGCA...GTTTTGATTGATGTTTTCTGAGGCCCTAGAGGAGTTTGTATCAATTTGTGAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS-3UTR CCA 90 bp TACTCACAAATTGATACAAACTCCTCTAGGGCCTCAGAAAACATCAATCAAAACGATGGCTTCACCCCATaGTGTGTCCTCCAGCATCAC +
Preference number: 4 (lower is better)
Translates to: YSQIDTNSSRASENINQNDGFTP*CVLQHH
Trigger: GTGATGCTGGAGGACACACCATGGGGTGAAGCCATC...GTTTTGATTGATGTTTTCTGAGGCCCTAGAGGAGTTTGTATCAATTTGTGAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS-3UTR CCA 90 bp TACTCACAAATTGATACAAACTCCTCTAGGGCCTCAGAAAACATCAATCAAAACCTGTCAGCCTTGGGATaGCTTCACCCCATGGTGTGT +
Preference number: 4 (lower is better)
Translates to: YSQIDTNSSRASENINQNLSALG*LHPMVC
Trigger: ACACACCATGGGGTGAAGCCATCCCAAGGCTGACAG...GTTTTGATTGATGTTTTCTGAGGCCCTAGAGGAGTTTGTATCAATTTGTGAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS-3UTR CCA 90 bp AATACTCACAAATTGATACAAACTCCTCTAGGGCCTCAGAAAACATCAATCAAACTGAGCTGTCAGCCTTaGGATGGCTTCACCCCATGG +
Preference number: 4 (lower is better)
Translates to: NTHKLIQTPLGPQKTSIKLSCQP*DGFTPW
Trigger: CCATGGGGTGAAGCCATCCCAAGGCTGACAGCTCAG...TTTGATTGATGTTTTCTGAGGCCCTAGAGGAGTTTGTATCAATTTGTGAGTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS-3UTR TCA 90 bp AATACTCACAAATTGATACAAACTCCTCTAGGGCCTCAGAAAACATCAATCAAAGTTGAAGGTGGGGAATaGGCCAGATCAGGGACTGGA +
Preference number: 4 (lower is better)
Translates to: NTHKLIQTPLGPQKTSIKVEGGE*ARSGTG
Trigger: TCCAGTCCCTGATCTGGCTCATTCCCCACCTTCAAC...TTTGATTGATGTTTTCTGAGGCCCTAGAGGAGTTTGTATCAATTTGTGAGTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS-3UTR TCA 90 bp AATACTCACAAATTGATACAAACTCCTCTAGGGCCTCAGAAAACATCAATCAAAAGGCAAGGTGAAGACTaGGCTGTCAGCCTTGGGATG +
Preference number: 4 (lower is better)
Translates to: NTHKLIQTPLGPQKTSIKRQGED*AVSLGM
Trigger: CATCCCAAGGCTGACAGCTCAGTCTTCACCTTGCCT...TTTGATTGATGTTTTCTGAGGCCCTAGAGGAGTTTGTATCAATTTGTGAGTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS-3UTR GCA 90 bp GAATGCAGAGTTTTCTCCAAGCTTCAGCTTGGCTGTGAGGCCTGGAAACCTAGAATTGCCACACTCAAATaGTACAGAATCTATAGGAAA +
Preference number: 4 (lower is better)
Translates to: ECRVFSKLQLGCEAWKPRIATLK*YRIYRK
Trigger: TTTCCTATAGATTCTGTAGCATTTGAGTGTGGCAAT...TCTAGGTTTCCAGGCCTCACAGCCAAGCTGAAGCTTGGAGAAAACTCTGCATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS-3UTR GCA 90 bp TACTCACAAATTGATACAAACTCCTCTAGGGCCTCAGAAAACATCAATCAAAACGGCGCCCTATGGCAGTaGAAAAACCTCTCTGTGATC +
Preference number: 4 (lower is better)
Translates to: YSQIDTNSSRASENINQNGALWQ*KNLSVI
Trigger: GATCACAGAGAGGTTTTTGCACTGCCATAGGGCGCC...GTTTTGATTGATGTTTTCTGAGGCCCTAGAGGAGTTTGTATCAATTTGTGAGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000374810.8
CDS-3UTR CCA 90 bp CACGTCACATGGTCAAAGTCTCCTCATTTCAGCCAGTCTCAACACAAAACACCCTTACTGGGGAATAACTaGAAGTCACTGTTTGATGTA +
Preference number: 4 (lower is better)
Translates to: HVTWSKSPHFSQSQHKTPLLGNN*KSLFDV
Trigger: TACATCAAACAGTGACTTCCAGTTATTCCCCAGTAA...GGGTGTTTTGTGTTGAGACTGGCTGAAATGAGGAGACTTTGACCATGTGACGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS-3UTR TCA 90 bp TACTCACAAATTGATACAAACTCCTCTAGGGCCTCAGAAAACATCAATCAAAACAGAAACGGGTCCCTCTaGCAGTTTTGGCAAAGTGCT +
Preference number: 4 (lower is better)
Translates to: YSQIDTNSSRASENINQNRNGSL*QFWQSA
Trigger: AGCACTTTGCCAAAACTGTCAGAGGGACCCGTTTCT...GTTTTGATTGATGTTTTCTGAGGCCCTAGAGGAGTTTGTATCAATTTGTGAGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS-3UTR GCA 90 bp GGTGGTTGTCTCCTTGAGTCTGTTGACACGTCACATGGTCAAAGTCTCCTCATTATTGCCACACTCAAATaGTACAGAATCTATAGGAAA +
Preference number: 4 (lower is better)
Translates to: GGCLLESVDTSHGQSLLIIATLK*YRIYRK
Trigger: TTTCCTATAGATTCTGTAGCATTTGAGTGTGGCAAT...AATGAGGAGACTTTGACCATGTGACGTGTCAACAGACTCAAGGAGACAACCACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS-3UTR TCA 90 bp TACTCACAAATTGATACAAACTCCTCTAGGGCCTCAGAAAACATCAATCAAAACGGTTGCATAGGACTTTaGACTCTGGTTCCCTCATGT +
Preference number: 4 (lower is better)
Translates to: YSQIDTNSSRASENINQNGCIGL*TLVPSC
Trigger: ACATGAGGGAACCAGAGTTCAAAGTCCTATGCAACC...GTTTTGATTGATGTTTTCTGAGGCCCTAGAGGAGTTTGTATCAATTTGTGAGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS-3UTR TCA 90 bp AATACTCACAAATTGATACAAACTCCTCTAGGGCCTCAGAAAACATCAATCAAAAGAAACGGGTCCCTCTaGCAGTTTTGGCAAAGTGCT +
Preference number: 4 (lower is better)
Translates to: NTHKLIQTPLGPQKTSIKRNGSL*QFWQSA
Trigger: AGCACTTTGCCAAAACTGTCAGAGGGACCCGTTTCT...TTTGATTGATGTTTTCTGAGGCCCTAGAGGAGTTTGTATCAATTTGTGAGTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS-3UTR TCA 90 bp AATACTCACAAATTGATACAAACTCCTCTAGGGCCTCAGAAAACATCAATCAAAAGACTAGCAGGAGACTaGGTAGTGTTGGTTCTTAGA +
Preference number: 4 (lower is better)
Translates to: NTHKLIQTPLGPQKTSIKRLAGD*VVLVLR
Trigger: TCTAAGAACCAACACTACTCAGTCTCCTGCTAGTCT...TTTGATTGATGTTTTCTGAGGCCCTAGAGGAGTTTGTATCAATTTGTGAGTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS-3UTR TCA 90 bp AATACTCACAAATTGATACAAACTCCTCTAGGGCCTCAGAAAACATCAATCAAAAGGCCTTTTAAAATTTaGGCCAAATGCCCTATAACT +
Preference number: 4 (lower is better)
Translates to: NTHKLIQTPLGPQKTSIKRPFKI*AKCPIT
Trigger: AGTTATAGGGCATTTGGCTCAAATTTTAAAAGGCCT...TTTGATTGATGTTTTCTGAGGCCCTAGAGGAGTTTGTATCAATTTGTGAGTATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS GCA 90 bp TGCCGCTGCACCGCCTTGGCGCTCAGCGCGTGGCGCTCTGCCCGCTaGCGGGCCCGCTGCAGCCGCCGCACCTGGCCCGCCTTCTCCAGC +
Preference number: 5 (lower is better)
Translates to: CRCTALALSAWRSAR*RARCSRRTWPAFSS
Trigger: GCTGGAGAAGGCGGGCCAGGTGCGGCGGCTGCAGCGGGCCCGGCAGCGGGCAGAGCGCCACGCGCTGAGCGCCAAGGCGGTGCAGCGGCA
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS CCA 90 bp GGCGCGGACGGCTCTCGCGGGCTCGGTTCTGCCGCTGCACCGCCTTaGCGCTCAGCGCGTGGCGCTCTGCCCGCTGCCGGGCCCGCTGCA +
Preference number: 5 (lower is better)
Translates to: GADGSRGLGSAAAPP*RSARGALPAAGPAA
Trigger: TGCAGCGGGCCCGGCAGCGGGCAGAGCGCCACGCGCTGAGCGCCAAGGCGGTGCAGCGGCAGAACCGAGCCCGCGAGAGCCGTCCGCGCC
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS GCA 90 bp TCGGTTCTGCCGCTGCACCGCCTTGGCGCTCAGCGCGTGGCGCTCTaGCCGCTGCCGGGCCCGCTGCAGCCGCCGCACCTGGCCCGCCTT +
Preference number: 5 (lower is better)
Translates to: SVLPLHRLGAQRVAL*PLPGPLQPPHLARL
Trigger: AAGGCGGGCCAGGTGCGGCGGCTGCAGCGGGCCCGGCAGCGGGCAGAGCGCCACGCGCTGAGCGCCAAGGCGGTGCAGCGGCAGAACCGA
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS GCA 90 bp TTCTTGGACCGGCGCGGACGGCTCTCGCGGGCTCGGTTCTGCCGCTaGACCGCCTTGGCGCTCAGCGCGTGGCGCTCTGCCCGCTGCCGG +
Preference number: 5 (lower is better)
Translates to: FLDRRGRLSRARFCR*TALALSAWRSARCR
Trigger: CCGGCAGCGGGCAGAGCGCCACGCGCTGAGCGCCAAGGCGGTGCAGCGGCAGAACCGAGCCCGCGAGAGCCGTCCGCGCCGGTCCAAGAA
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS GCA 90 bp CTCTGGTTCTTGGACCGGCGCGGACGGCTCTCGCGGGCTCGGTTCTaGCGCTGCACCGCCTTGGCGCTCAGCGCGTGGCGCTCTGCCCGC +
Preference number: 5 (lower is better)
Translates to: LWFLDRRGRLSRARF*RCTALALSAWRSAR
Trigger: GCGGGCAGAGCGCCACGCGCTGAGCGCCAAGGCGGTGCAGCGGCAGAACCGAGCCCGCGAGAGCCGTCCGCGCCGGTCCAAGAACCAGAG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS-3UTR CAA 90 bp GGGAGGTTTCGGTGTCCAGCCCGAGGAGTCGGAGGAGCCCGACAGGGATCGGGAAAGCTGCTCTGGTTCTaGGACCGGCGCGGACGGCTC +
Preference number: 5 (lower is better)
Translates to: GRFRCPARGVGGARQGSGKLLWF*DRRGRL
Trigger: GAGCCGTCCGCGCCGGTCCAAGAACCAGAGCAGCTT...TCCCGATCCCTGTCGGGCTCCTCCGACTCCTCGGGCTGGACACCGAAACCTCCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS-3UTR CAA 90 bp GTCCAGCCCGAGGAGTCGGAGGAGCCCGACAGGGATCGGGATCGGCAAGGGGTTAAGCTGCTCTGGTTCTaGGACCGGCGCGGACGGCTC +
Preference number: 5 (lower is better)
Translates to: VQPEESEEPDRDRDRQGVKLLWF*DRRGRL
Trigger: GAGCCGTCCGCGCCGGTCCAAGAACCAGAGCAGCTT...AACCCCTTGCCGATCCCGATCCCTGTCGGGCTCCTCCGACTCCTCGGGCTGGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS-3UTR CAA 90 bp GGGAGGTTTCGGTGTCCAGCCCGAGGAGTCGGAGGAGCCCGACAGGGATCGGGAGCCTGGGAGCAGGGTTaGGCCTCTCTGAGCAAGCAC +
Preference number: 5 (lower is better)
Translates to: GRFRCPARGVGGARQGSGAWEQG*ASLSKH
Trigger: GTGCTTGCTCAGAGAGGCCAAACCCTGCTCCCAGGC...TCCCGATCCCTGTCGGGCTCCTCCGACTCCTCGGGCTGGACACCGAAACCTCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS-3UTR CAA 90 bp GTCCAGCCCGAGGAGTCGGAGGAGCCCGACAGGGATCGGGATCGGCAAGGGGTTTACTCGGGTGACGTGTaGGGGGTAGAGTGGCAAGGT +
Preference number: 5 (lower is better)
Translates to: VQPEESEEPDRDRDRQGVYSGDV*GVEWQG
Trigger: ACCTTGCCACTCTACCCCCAACACGTCACCCGAGTA...AACCCCTTGCCGATCCCGATCCCTGTCGGGCTCCTCCGACTCCTCGGGCTGGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS-3UTR CAA 90 bp GGGAGGTTTCGGTGTCCAGCCCGAGGAGTCGGAGGAGCCCGACAGGGATCGGGAAGGGAGATTCAGCTCTaGGAGGTGCCGAAGACCCTA +
Preference number: 5 (lower is better)
Translates to: GRFRCPARGVGGARQGSGREIQL*EVPKTL
Trigger: TAGGGTCTTCGGCACCTCCAAGAGCTGAATCTCCCT...TCCCGATCCCTGTCGGGCTCCTCCGACTCCTCGGGCTGGACACCGAAACCTCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS-3UTR CAA 90 bp GGGAGGTTTCGGTGTCCAGCCCGAGGAGTCGGAGGAGCCCGACAGGGATCGGGAATAGGTCAGAGCAAGTaGCTCAGAGGGTTCCAGGCA +
Preference number: 5 (lower is better)
Translates to: GRFRCPARGVGGARQGSGIGQSK*LRGFQA
Trigger: TGCCTGGAACCCTCTGAGCAACTTGCTCTGACCTAT...TCCCGATCCCTGTCGGGCTCCTCCGACTCCTCGGGCTGGACACCGAAACCTCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS-3UTR CAA 90 bp GAATGCAGAGTTTTCTCCAAGCTTCAGCTTGGCTGTGAGGCCTGGAAACCTAGATGCCGCTGCACCGCCTaGGCGCTCAGCGCGTGGCGC +
Preference number: 5 (lower is better)
Translates to: ECRVFSKLQLGCEAWKPRCRCTA*ALSAWR
Trigger: GCGCCACGCGCTGAGCGCCAAGGCGGTGCAGCGGCA...TCTAGGTTTCCAGGCCTCACAGCCAAGCTGAAGCTTGGAGAAAACTCTGCATTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS-3UTR CAA 90 bp GGTGGTTGTCTCCTTGAGTCTGTTGACACGTCACATGGTCAAAGTCTCCTCATTTGCCGCTGCACCGCCTaGGCGCTCAGCGCGTGGCGC +
Preference number: 5 (lower is better)
Translates to: GGCLLESVDTSHGQSLLICRCTA*ALSAWR
Trigger: GCGCCACGCGCTGAGCGCCAAGGCGGTGCAGCGGCA...AATGAGGAGACTTTGACCATGTGACGTGTCAACAGACTCAAGGAGACAACCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS-3UTR CAA 90 bp TTCATACACGGTGCCCTGCTGGGGCTAGACTGGCAAAGGCTGGAAAGACACCCAACAGTGCACACTCCCTaGGTGCCCTGCTCCCTGCAG +
Preference number: 5 (lower is better)
Translates to: FIHGALLGLDWQRLERHPTVHTP*VPCSLQ
Trigger: CTGCAGGGAGCAGGGCACCAAGGGAGTGTGCACTGT...TGGGTGTCTTTCCAGCCTTTGCCAGTCTAGCCCCAGCAGGGCACCGTGTATGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS-3UTR CAA 90 bp GGGAGGTTTCGGTGTCCAGCCCGAGGAGTCGGAGGAGCCCGACAGGGATCGGGACAAGCAGGTGAGAGATaGGGTTCTAGAATACAGGAG +
Preference number: 5 (lower is better)
Translates to: GRFRCPARGVGGARQGSGQAGER*GSRIQE
Trigger: CTCCTGTATTCTAGAACCCAATCTCTCACCTGCTTG...TCCCGATCCCTGTCGGGCTCCTCCGACTCCTCGGGCTGGACACCGAAACCTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS-3UTR CAA 90 bp GGGAGGTTTCGGTGTCCAGCCCGAGGAGTCGGAGGAGCCCGACAGGGATCGGGAGATGCACTCAACTTGTaGGTTCCATGTGGAACTAGG +
Preference number: 5 (lower is better)
Translates to: GRFRCPARGVGGARQGSGDALNL*VPCGTR
Trigger: CCTAGTTCCACATGGAACCAACAAGTTGAGTGCATC...TCCCGATCCCTGTCGGGCTCCTCCGACTCCTCGGGCTGGACACCGAAACCTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS-3UTR CAA 90 bp GGGAGGTTTCGGTGTCCAGCCCGAGGAGTCGGAGGAGCCCGACAGGGATCGGGAGTCTCCTTGAGTCTGTaGACACGTCACATGGTCAAA +
Preference number: 5 (lower is better)
Translates to: GRFRCPARGVGGARQGSGVSLSL*TRHMVK
Trigger: TTTGACCATGTGACGTGTCAACAGACTCAAGGAGAC...TCCCGATCCCTGTCGGGCTCCTCCGACTCCTCGGGCTGGACACCGAAACCTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS-3UTR CAA 90 bp AGGGCCTGCAGAAGGGTGGATTATAGAAAAGGGAAGTGGGGGCAGACTCCAGGCCAGGATGGTAGGGCCTaGCCCAGCTTCTACTCGGGT +
Preference number: 5 (lower is better)
Translates to: RACRRVDYRKGKWGQTPGQDGRA*PSFYSG
Trigger: ACCCGAGTAGAAGCTGGGCAAGGCCCTACCATCCTG...GCCTGGAGTCTGCCCCCACTTCCCTTTTCTATAATCCACCCTTCTGCAGGCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS-3UTR CAA 90 bp CCCTGCTCCCTGCAGCTTCTCAACGTGTCTGTCCTGTCCGCATCTCCAATAGGCCTGGTGGGGTCCGTGTaGCACCTAAGACATTATAGG +
Preference number: 5 (lower is better)
Translates to: PCSLQLLNVSVLSASPIGLVGSV*HLRHYR
Trigger: CCTATAATGTCTTAGGTGCAACACGGACCCCACCAG...GCCTATTGGAGATGCGGACAGGACAGACACGTTGAGAAGCTGCAGGGAGCAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS-3UTR CAA 90 bp TTCATACACGGTGCCCTGCTGGGGCTAGACTGGCAAAGGCTGGAAAGACACCCAGAGGTGGTTGTCTCCTaGAGTCTGTTGACACGTCAC +
Preference number: 5 (lower is better)
Translates to: FIHGALLGLDWQRLERHPEVVVS*SLLTRH
Trigger: GTGACGTGTCAACAGACTCAAGGAGACAACCACCTC...TGGGTGTCTTTCCAGCCTTTGCCAGTCTAGCCCCAGCAGGGCACCGTGTATGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS-3UTR CAA 90 bp AGAGTTTTCTCCAAGCTTCAGCTTGGCTGTGAGGCCTGGAAACCTAGAGTTGGGACTGAGCTGTCAGCCTaGGGATGGCTTCACCCCATG +
Preference number: 5 (lower is better)
Translates to: RVFSKLQLGCEAWKPRVGTELSA*GWLHPM
Trigger: CATGGGGTGAAGCCATCCCAAGGCTGACAGCTCAGT...CCCAACTCTAGGTTTCCAGGCCTCACAGCCAAGCTGAAGCTTGGAGAAAACTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS-3UTR CAA 90 bp GAATGCAGAGTTTTCTCCAAGCTTCAGCTTGGCTGTGAGGCCTGGAAACCTAGAGGAGGGCAGCTGCCTTaGCCCTCATGGGAATGCAGA +
Preference number: 5 (lower is better)
Translates to: ECRVFSKLQLGCEAWKPRGGQLP*PSWECR
Trigger: TCTGCATTCCCATGAGGGCAAAGGCAGCTGCCCTCC...TCTAGGTTTCCAGGCCTCACAGCCAAGCTGAAGCTTGGAGAAAACTCTGCATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS-3UTR CAA 90 bp AGGGCCTGCAGAAGGGTGGATTATAGAAAAGGGAAGTGGGGGCAGACTCCAGGCAGTAGGCAAGAAGGGTaGGAGGGAGATTCAGCTCTT +
Preference number: 5 (lower is better)
Translates to: RACRRVDYRKGKWGQTPGSRQEG*EGDSAL
Trigger: AAGAGCTGAATCTCCCTCCAACCCTTCTTGCCTACT...GCCTGGAGTCTGCCCCCACTTCCCTTTTCTATAATCCACCCTTCTGCAGGCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS-3UTR CAA 90 bp CCCTGCTCCCTGCAGCTTCTCAACGTGTCTGTCCTGTCCGCATCTCCAATAGGCAGGGATGCACTCAACTaGTTGGTTCCATGTGGAACT +
Preference number: 5 (lower is better)
Translates to: PCSLQLLNVSVLSASPIGRDALN*LVPCGT
Trigger: AGTTCCACATGGAACCAACAAGTTGAGTGCATCCCT...GCCTATTGGAGATGCGGACAGGACAGACACGTTGAGAAGCTGCAGGGAGCAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS-3UTR CAA 90 bp AGAGTTTTCTCCAAGCTTCAGCTTGGCTGTGAGGCCTGGAAACCTAGAGTTGGGTCTCCAAGCTTCAGCTaGGCTGTGAGGCCTGGAAAC +
Preference number: 5 (lower is better)
Translates to: RVFSKLQLGCEAWKPRVGSPSFS*AVRPGN
Trigger: GTTTCCAGGCCTCACAGCCAAGCTGAAGCTTGGAGA...CCCAACTCTAGGTTTCCAGGCCTCACAGCCAAGCTGAAGCTTGGAGAAAACTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS-3UTR CAA 90 bp AGAGTTTTCTCCAAGCTTCAGCTTGGCTGTGAGGCCTGGAAACCTAGAGTTGGGAGGGAGATTCAGCTCTaGGAGGTGCCGAAGACCCTA +
Preference number: 5 (lower is better)
Translates to: RVFSKLQLGCEAWKPRVGREIQL*EVPKTL
Trigger: TAGGGTCTTCGGCACCTCCAAGAGCTGAATCTCCCT...CCCAACTCTAGGTTTCCAGGCCTCACAGCCAAGCTGAAGCTTGGAGAAAACTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS-3UTR CAA 90 bp AGGGCCTGCAGAAGGGTGGATTATAGAAAAGGGAAGTGGGGGCAGACTCCAGGCAGGTTGCATAGGACTTaGAACTCTGGTTCCCTCATG +
Preference number: 5 (lower is better)
Translates to: RACRRVDYRKGKWGQTPGRLHRT*NSGSLM
Trigger: CATGAGGGAACCAGAGTTCAAAGTCCTATGCAACCT...GCCTGGAGTCTGCCCCCACTTCCCTTTTCTATAATCCACCCTTCTGCAGGCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS-3UTR CAA 90 bp TTCATACACGGTGCCCTGCTGGGGCTAGACTGGCAAAGGCTGGAAAGACACCCAGTCTCCTTGAGTCTGTaGACACGTCACATGGTCAAA +
Preference number: 5 (lower is better)
Translates to: FIHGALLGLDWQRLERHPVSLSL*TRHMVK
Trigger: TTTGACCATGTGACGTGTCAACAGACTCAAGGAGAC...TGGGTGTCTTTCCAGCCTTTGCCAGTCTAGCCCCAGCAGGGCACCGTGTATGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS-3UTR CAA 90 bp AACACAAAACACCCAACAGGGATGCACTCAACTTGTTGGTTCCATGTGGAACTAACAGTGCACACTCCCTaGGTGCCCTGCTCCCTGCAG +
Preference number: 5 (lower is better)
Translates to: NTKHPTGMHSTCWFHVELTVHTP*VPCSLQ
Trigger: CTGCAGGGAGCAGGGCACCAAGGGAGTGTGCACTGT...TAGTTCCACATGGAACCAACAAGTTGAGTGCATCCCTGTTGGGTGTTTTGTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS-3UTR CAA 90 bp CACGTCACATGGTCAAAGTCTCCTCATTTCAGCCAGTCTCAACACAAAACACCCACTGAGCTGTCAGCCTaGGGATGGCTTCACCCCATG +
Preference number: 5 (lower is better)
Translates to: HVTWSKSPHFSQSQHKTPTELSA*GWLHPM
Trigger: CATGGGGTGAAGCCATCCCAAGGCTGACAGCTCAGT...GGGTGTTTTGTGTTGAGACTGGCTGAAATGAGGAGACTTTGACCATGTGACGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS-3UTR CAA 90 bp ATCAATCAAAACAGACTCTCTAACCCCCTCCTAAGGTTGCATAGGACTTTGAACGCCTGGGAGCAGGGTTaGGCCTCTCTGAGCAAGCAC +
Preference number: 5 (lower is better)
Translates to: INQNRLSNPLLRLHRTLNAWEQG*ASLSKH
Trigger: GTGCTTGCTCAGAGAGGCCAAACCCTGCTCCCAGGC...GTTCAAAGTCCTATGCAACCTTAGGAGGGGGTTAGAGAGTCTGTTTTGATTGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS-3UTR CAA 90 bp GGTGGTTGTCTCCTTGAGTCTGTTGACACGTCACATGGTCAAAGTCTCCTCATTCATCCCAAGAGGCTGTaGCTGGTGTCTGAGCCCAAA +
Preference number: 5 (lower is better)
Translates to: GGCLLESVDTSHGQSLLIHPKRL*LVSEPK
Trigger: TTTGGGCTCAGACACCAGCAACAGCCTCTTGGGATG...AATGAGGAGACTTTGACCATGTGACGTGTCAACAGACTCAAGGAGACAACCACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS-3UTR CAA 90 bp AACACAAAACACCCAACAGGGATGCACTCAACTTGTTGGTTCCATGTGGAACTAGGAGGGCAGCTGCCTTaGCCCTCATGGGAATGCAGA +
Preference number: 5 (lower is better)
Translates to: NTKHPTGMHSTCWFHVELGGQLP*PSWECR
Trigger: TCTGCATTCCCATGAGGGCAAAGGCAGCTGCCCTCC...TAGTTCCACATGGAACCAACAAGTTGAGTGCATCCCTGTTGGGTGTTTTGTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS-3UTR CAA 90 bp GGTGGTTGTCTCCTTGAGTCTGTTGACACGTCACATGGTCAAAGTCTCCTCATTCAGGGTCCCCACCATTaGGTAGGGAATTACTGGGAA +
Preference number: 5 (lower is better)
Translates to: GGCLLESVDTSHGQSLLIQGPHH*VGNYWE
Trigger: TTCCCAGTAATTCCCTACCAAATGGTGGGGACCCTG...AATGAGGAGACTTTGACCATGTGACGTGTCAACAGACTCAAGGAGACAACCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS-3UTR CAA 90 bp CTCAACTTGTTGGTTCCATGTGGAACTAGGTGGCAGGGCGAGAGGGAAAGTAGTCAAGCAGGTGAGAGATaGGGTTCTAGAATACAGGAG +
Preference number: 5 (lower is better)
Translates to: LNLLVPCGTRWQGERESSQAGER*GSRIQE
Trigger: CTCCTGTATTCTAGAACCCAATCTCTCACCTGCTTG...ACTACTTTCCCTCTCGCCCTGCCACCTAGTTCCACATGGAACCAACAAGTTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS-3UTR CAA 90 bp AGAGTTTTCTCCAAGCTTCAGCTTGGCTGTGAGGCCTGGAAACCTAGAGTTGGGAACCCCCTCCTAAGGTaGCATAGGACTTTGAACTCT +
Preference number: 5 (lower is better)
Translates to: RVFSKLQLGCEAWKPRVGNPLLR*HRTLNS
Trigger: AGAGTTCAAAGTCCTATGCAACCTTAGGAGGGGGTT...CCCAACTCTAGGTTTCCAGGCCTCACAGCCAAGCTGAAGCTTGGAGAAAACTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS-3UTR CAA 90 bp GGTGGTTGTCTCCTTGAGTCTGTTGACACGTCACATGGTCAAAGTCTCCTCATTATAGGTCAGAGCAAGTaGCTCAGAGGGTTCCAGGCA +
Preference number: 5 (lower is better)
Translates to: GGCLLESVDTSHGQSLLIIGQSK*LRGFQA
Trigger: TGCCTGGAACCCTCTGAGCAACTTGCTCTGACCTAT...AATGAGGAGACTTTGACCATGTGACGTGTCAACAGACTCAAGGAGACAACCACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS-3UTR CAA 90 bp AAGTCTCCTCATTTCAGCCAGTCTCAACACAAAACACCCAACAGGGATGCACTCGAGGTGGTTGTCTCCTaGAGTCTGTTGACACGTCAC +
Preference number: 5 (lower is better)
Translates to: KSPHFSQSQHKTPNRDALEVVVS*SLLTRH
Trigger: GTGACGTGTCAACAGACTCAAGGAGACAACCACCTC...GAGTGCATCCCTGTTGGGTGTTTTGTGTTGAGACTGGCTGAAATGAGGAGACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS-3UTR CAA 90 bp AGAGTTTTCTCCAAGCTTCAGCTTGGCTGTGAGGCCTGGAAACCTAGAGTTGGGCTGGATAGGAACAATTaGCAGATTGAGACAGTGGGA +
Preference number: 5 (lower is better)
Translates to: RVFSKLQLGCEAWKPRVGLDRNN*QIETVG
Trigger: TCCCACTGTCTCAATCTGCAAATTGTTCCTATCCAG...CCCAACTCTAGGTTTCCAGGCCTCACAGCCAAGCTGAAGCTTGGAGAAAACTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS-3UTR CAA 90 bp AACACAAAACACCCAACAGGGATGCACTCAACTTGTTGGTTCCATGTGGAACTACATCCCAAGAGGCTGTaGCTGGTGTCTGAGCCCAAA +
Preference number: 5 (lower is better)
Translates to: NTKHPTGMHSTCWFHVELHPKRL*LVSEPK
Trigger: TTTGGGCTCAGACACCAGCAACAGCCTCTTGGGATG...TAGTTCCACATGGAACCAACAAGTTGAGTGCATCCCTGTTGGGTGTTTTGTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS-3UTR CAA 90 bp AACACAAAACACCCAACAGGGATGCACTCAACTTGTTGGTTCCATGTGGAACTATCTCCAAGCTTCAGCTaGGCTGTGAGGCCTGGAAAC +
Preference number: 5 (lower is better)
Translates to: NTKHPTGMHSTCWFHVELSPSFS*AVRPGN
Trigger: GTTTCCAGGCCTCACAGCCAAGCTGAAGCTTGGAGA...TAGTTCCACATGGAACCAACAAGTTGAGTGCATCCCTGTTGGGTGTTTTGTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS-3UTR CAA 90 bp AAGTCTCCTCATTTCAGCCAGTCTCAACACAAAACACCCAACAGGGATGCACTCGGAAAGACACCCAGCTaGAAGGAACCACTCAGACTT +
Preference number: 5 (lower is better)
Translates to: KSPHFSQSQHKTPNRDALGKTPS*KEPLRL
Trigger: AAGTCTGAGTGGTTCCTTCAAGCTGGGTGTCTTTCC...GAGTGCATCCCTGTTGGGTGTTTTGTGTTGAGACTGGCTGAAATGAGGAGACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS-3UTR CAA 90 bp GAATGCAGAGTTTTCTCCAAGCTTCAGCTTGGCTGTGAGGCCTGGAAACCTAGAAGGGATGCACTCAACTaGTTGGTTCCATGTGGAACT +
Preference number: 5 (lower is better)
Translates to: ECRVFSKLQLGCEAWKPRRDALN*LVPCGT
Trigger: AGTTCCACATGGAACCAACAAGTTGAGTGCATCCCT...TCTAGGTTTCCAGGCCTCACAGCCAAGCTGAAGCTTGGAGAAAACTCTGCATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS-3UTR CAA 90 bp AAGTCTCCTCATTTCAGCCAGTCTCAACACAAAACACCCAACAGGGATGCACTCAACCCCCTCCTAAGGTaGCATAGGACTTTGAACTCT +
Preference number: 5 (lower is better)
Translates to: KSPHFSQSQHKTPNRDALNPLLR*HRTLNS
Trigger: AGAGTTCAAAGTCCTATGCAACCTTAGGAGGGGGTT...GAGTGCATCCCTGTTGGGTGTTTTGTGTTGAGACTGGCTGAAATGAGGAGACTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS-3UTR CAA 90 bp AACACAAAACACCCAACAGGGATGCACTCAACTTGTTGGTTCCATGTGGAACTACTGGTGGGGTCCGTGTaGCACCTAAGACATTATAGG +
Preference number: 5 (lower is better)
Translates to: NTKHPTGMHSTCWFHVELLVGSV*HLRHYR
Trigger: CCTATAATGTCTTAGGTGCAACACGGACCCCACCAG...TAGTTCCACATGGAACCAACAAGTTGAGTGCATCCCTGTTGGGTGTTTTGTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS-3UTR CAA 90 bp TACTCACAAATTGATACAAACTCCTCTAGGGCCTCAGAAAACATCAATCAAAACCAGGATGGTAGGGCCTaGCCCAGCTTCTACTCGGGT +
Preference number: 5 (lower is better)
Translates to: YSQIDTNSSRASENINQNQDGRA*PSFYSG
Trigger: ACCCGAGTAGAAGCTGGGCAAGGCCCTACCATCCTG...GTTTTGATTGATGTTTTCTGAGGCCCTAGAGGAGTTTGTATCAATTTGTGAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS-3UTR CAA 90 bp AAGTCTCCTCATTTCAGCCAGTCTCAACACAAAACACCCAACAGGGATGCACTCCTGGATAGGAACAATTaGCAGATTGAGACAGTGGGA +
Preference number: 5 (lower is better)
Translates to: KSPHFSQSQHKTPNRDALLDRNN*QIETVG
Trigger: TCCCACTGTCTCAATCTGCAAATTGTTCCTATCCAG...GAGTGCATCCCTGTTGGGTGTTTTGTGTTGAGACTGGCTGAAATGAGGAGACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS-3UTR CAA 90 bp ATCAATCAAAACAGACTCTCTAACCCCCTCCTAAGGTTGCATAGGACTTTGAACAGTAGGCAAGAAGGGTaGGAGGGAGATTCAGCTCTT +
Preference number: 5 (lower is better)
Translates to: INQNRLSNPLLRLHRTLNSRQEG*EGDSAL
Trigger: AAGAGCTGAATCTCCCTCCAACCCTTCTTGCCTACT...GTTCAAAGTCCTATGCAACCTTAGGAGGGGGTTAGAGAGTCTGTTTTGATTGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS-3UTR CAA 90 bp AACACAAAACACCCAACAGGGATGCACTCAACTTGTTGGTTCCATGTGGAACTAGATGCACTCAACTTGTaGGTTCCATGTGGAACTAGG +
Preference number: 5 (lower is better)
Translates to: NTKHPTGMHSTCWFHVELDALNL*VPCGTR
Trigger: CCTAGTTCCACATGGAACCAACAAGTTGAGTGCATC...TAGTTCCACATGGAACCAACAAGTTGAGTGCATCCCTGTTGGGTGTTTTGTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS-3UTR CAA 90 bp AATACTCACAAATTGATACAAACTCCTCTAGGGCCTCAGAAAACATCAATCAAAGGAAAGACACCCAGCTaGAAGGAACCACTCAGACTT +
Preference number: 5 (lower is better)
Translates to: NTHKLIQTPLGPQKTSIKGKTPS*KEPLRL
Trigger: AAGTCTGAGTGGTTCCTTCAAGCTGGGTGTCTTTCC...TTTGATTGATGTTTTCTGAGGCCCTAGAGGAGTTTGTATCAATTTGTGAGTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS-3UTR CAA 90 bp AATACTCACAAATTGATACAAACTCCTCTAGGGCCTCAGAAAACATCAATCAAAAGGTTGCATAGGACTTaGAACTCTGGTTCCCTCATG +
Preference number: 5 (lower is better)
Translates to: NTHKLIQTPLGPQKTSIKRLHRT*NSGSLM
Trigger: CATGAGGGAACCAGAGTTCAAAGTCCTATGCAACCT...TTTGATTGATGTTTTCTGAGGCCCTAGAGGAGTTTGTATCAATTTGTGAGTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS CAA 90 bp CGGCGCGGACGGCTCTCGCGGGCTCGGTTCTGCCGCTGCACCGCCTaGGCGCTCAGCGCGTGGCGCTCTGCCCGCTGCCGGGCCCGCTGC +
Preference number: 6 (lower is better)
Translates to: RRGRLSRARFCRCTA*ALSAWRSARCRARC
Trigger: GCAGCGGGCCCGGCAGCGGGCAGAGCGCCACGCGCTGAGCGCCAAGGCGGTGCAGCGGCAGAACCGAGCCCGCGAGAGCCGTCCGCGCCG
80% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS GCA 72 bp CGGCGCGGACGGCTCTCGCGGGCTCGGTTCTGCCGCTaGACCGCCTTGGCGCTCAGCGCGTGGCGCTCTGCC +
Preference number: 6 (lower is better)
Translates to: RRGRLSRARFCR*TALALSAWRSA
Trigger: GGCAGAGCGCCACGCGCTGAGCGCCAAGGCGGTGCAGCGGCAGAACCGAGCCCGCGAGAGCCGTCCGCGCCG
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS CCA 72 bp GGCTCTCGCGGGCTCGGTTCTGCCGCTGCACCGCCTTaGCGCTCAGCGCGTGGCGCTCTGCCCGCTGCCGGG +
Preference number: 6 (lower is better)
Translates to: GSRGLGSAAAPP*RSARGALPAAG
Trigger: CCCGGCAGCGGGCAGAGCGCCACGCGCTGAGCGCCAAGGCGGTGCAGCGGCAGAACCGAGCCCGCGAGAGCC
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS CAA 72 bp CGGCTCTCGCGGGCTCGGTTCTGCCGCTGCACCGCCTaGGCGCTCAGCGCGTGGCGCTCTGCCCGCTGCCGG +
Preference number: 6 (lower is better)
Translates to: RLSRARFCRCTA*ALSAWRSARCR
Trigger: CCGGCAGCGGGCAGAGCGCCACGCGCTGAGCGCCAAGGCGGTGCAGCGGCAGAACCGAGCCCGCGAGAGCCG
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS GCA 72 bp TTGGACCGGCGCGGACGGCTCTCGCGGGCTCGGTTCTaGCGCTGCACCGCCTTGGCGCTCAGCGCGTGGCGC +
Preference number: 6 (lower is better)
Translates to: LDRRGRLSRARF*RCTALALSAWR
Trigger: GCGCCACGCGCTGAGCGCCAAGGCGGTGCAGCGGCAGAACCGAGCCCGCGAGAGCCGTCCGCGCCGGTCCAA
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8
CDS CCA 72 bp GGGTGCTCGATGAGGAGGTCCTCCAGGGGACTGCTCTaGAGGCGGGCGGGACCGAGTCCAGGCCCCTCCGGC +
Preference number: 6 (lower is better)
Translates to: GCSMRRSSRGLL*RRAGPSPGPSG
Trigger: GCCGGAGGGGCCTGGACTCGGTCCCGCCCGCCTCCAGAGCAGTCCCCTGGAGGACCTCCTCATCGAGCACCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451665.5
CDS CCA 72 bp GGGTGCTCGATGAGGAGGTCCTCCAGGGGACTGCTCTaGAGGCGGGCGGGACCGAGTCCAGGCCCCTCTGCC +
Preference number: 6 (lower is better)
Translates to: GCSMRRSSRGLL*RRAGPSPGPSA
Trigger: GGCAGAGGGGCCTGGACTCGGTCCCGCCCGCCTCCAGAGCAGTCCCCTGGAGGACCTCCTCATCGAGCACCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374809.6
ENST00000374810.8