RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TP53INP1 (Homo sapiens)

Ensembl gene IDs: ENSG00000164938

Ensembl transcript IDs: ENST00000342697.5, ENST00000448464.6

Found 342 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CCATTGTGCTTGACTTGCCGAGGGTGGCAATCCCTGGTAAGATTTTaGCGACGAAGGCTATTTCTGTTAAGAGGCTGTCTTTCACTGTGT +
Preference number: 1 (lower is better)
Translates to: PLCLTCRGWQSLVRF*RRRLFLLRGCLSLC
Trigger: ACACAGTGAAAGACAGCCTCTTAACAGAAATAGCCTTCGTCGCCAAAATCTTACCAGGGATTGCCACCCTCGGCAAGTCAAGCACAATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448464.6
3UTR TCA 90 bp ATGAAGTCACTTGAGTGCCTGGACAAGTACTTCCAAATTTATAGCTaGTGCGAGGTGAGGAGTGGACAGAATTGGCGGGAAGGAATAGTA +
Preference number: 1 (lower is better)
Translates to: MKSLECLDKYFQIYS*CEVRSGQNWREGIV
Trigger: TACTATTCCTTCCCGCCAATTCTGTCCACTCCTCACCTCGCATCAGCTATAAATTTGGAAGTACTTGTCCAGGCACTCAAGTGACTTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
3UTR CCA 90 bp GTCTTTCACTGTGTTCTTTTATCCACTGGGAAGGGCGAAAGCTCTTaGGTTGTTCCAGAAAAGTTGTATGAGCAGCAAGAGCTGCAACAT +
Preference number: 1 (lower is better)
Translates to: VFHCVLLSTGKGESS*VVPEKLYEQQELQH
Trigger: ATGTTGCAGCTCTTGCTGCTCATACAACTTTTCTGGAACAACCCAAGAGCTTTCGCCCTTCCCAGTGGATAAAAGAACACAGTGAAAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448464.6
3UTR TCA 90 bp TTCATGTTGCCAAACAAAATCTCATGGCTGAACTTCTGTAGCTTGTaGGGTACTAACAACTTACATGCAATGTATGAAAAAGAGACGCCG +
Preference number: 1 (lower is better)
Translates to: FMLPNKISWLNFCSL*GTNNLHAMYEKETP
Trigger: CGGCGTCTCTTTTTCATACATTGCATGTAAGTTGTTAGTACCTCACAAGCTACAGAAGTTCAGCCATGAGATTTTGTTTGGCAACATGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
3UTR GCA 90 bp TGTCGTAAAATTCTCAACTATATACAAAACATTGTCCACTTAAGCTaGCTGCCTTTCAAGAGTAACTCTCCTCCCATGCAAAGGATACTG +
Preference number: 1 (lower is better)
Translates to: CRKILNYIQNIVHLS*LPFKSNSPPMQRIL
Trigger: CAGTATCCTTTGCATGGGAGGAGAGTTACTCTTGAAAGGCAGGCAGCTTAAGTGGACAATGTTTTGTATATAGTTGAGAATTTTACGACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
3UTR CCA 90 bp AGAGACGCCGTGTATTCAGAGTTTTACATCCTGAAGACATTAAGCTaGTCTATTTTCAAGTTACCAATGCATGGCCCTATAACAAACATC +
Preference number: 1 (lower is better)
Translates to: RDAVYSEFYILKTLS*SIFKLPMHGPITNI
Trigger: GATGTTTGTTATAGGGCCATGCATTGGTAACTTGAAAATAGACCAGCTTAATGTCTTCAGGATGTAAAACTCTGAATACACGGCGTCTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
3UTR TCA 90 bp TGGAAATATAAAGCCTATCTCTTTTCCCATGGGCAGAGAGAAATATaGAGTCACTTGAGTGCCTGGACAAGTACTTCCAAATTTATAGCT +
Preference number: 1 (lower is better)
Translates to: WKYKAYLFSHGQREI*SHLSAWTSTSKFIA
Trigger: AGCTATAAATTTGGAAGTACTTGTCCAGGCACTCAAGTGACTTCATATTTCTCTCTGCCCATGGGAAAAGAGATAGGCTTTATATTTCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
3UTR TCA 90 bp CTCATCTGCATGTTTTCCAGTACCTCTTTCTCCACCCTAAACAGTTaGAATTTAATTGGTCTCAAATTTCAAGTGAAACTGATACATGGC +
Preference number: 1 (lower is better)
Translates to: LICMFSSTSFSTLNS*NLIGLKFQVKLIHG
Trigger: GCCATGTATCAGTTTCACTTGAAATTTGAGACCAATTAAATTTCAACTGTTTAGGGTGGAGAAAGAGGTACTGGAAAACATGCAGATGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
3UTR CCA 90 bp CATCCTGAAGACATTAAGCTGGTCTATTTTCAAGTTACCAATGCATaGCCCTATAACAAACATCGTATAAAACATACACACCTTCATGGA +
Preference number: 1 (lower is better)
Translates to: HPEDIKLVYFQVTNA*PYNKHRIKHTHLHG
Trigger: TCCATGAAGGTGTGTATGTTTTATACGATGTTTGTTATAGGGCCATGCATTGGTAACTTGAAAATAGACCAGCTTAATGTCTTCAGGATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
3UTR TCA 90 bp AGTTATACACAAATCTGTTCATGTTGCCAAACAAAATCTCATGGCTaGACTTCTGTAGCTTGTGAGGTACTAACAACTTACATGCAATGT +
Preference number: 1 (lower is better)
Translates to: SYTQICSCCQTKSHG*TSVACEVLTTYMQC
Trigger: ACATTGCATGTAAGTTGTTAGTACCTCACAAGCTACAGAAGTTCAGCCATGAGATTTTGTTTGGCAACATGAACAGATTTGTGTATAACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
3UTR GCA 90 bp TTATTTACTGACAGATTGAAAACTGTAACTCCAGGTAGTGCAAAATaGACCACAACCCAATTACAAAGAACAGGTGTTAACACACAATGT +
Preference number: 1 (lower is better)
Translates to: LFTDRLKTVTPGSAK*TTTQLQRTGVNTQC
Trigger: ACATTGTGTGTTAACACCTGTTCTTTGTAATTGGGTTGTGGTGCATTTTGCACTACCTGGAGTTACAGTTTTCAATCTGTCAGTAAATAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
3UTR CAA 90 bp CTGACGCGGGCAGGGCTGATGAACAACCCAGCCATTGTGCTTGACTaGCCGAGGGTGGCAATCCCTGGTAAGATTTTGGCGACGAAGGCT +
Preference number: 2 (lower is better)
Translates to: LTRAGLMNNPAIVLD*PRVAIPGKILATKA
Trigger: AGCCTTCGTCGCCAAAATCTTACCAGGGATTGCCACCCTCGGCAAGTCAAGCACAATGGCTGGGTTGTTCATCAGCCCTGCCCGCGTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448464.6
3UTR-3UTR GCA 90 bp CTAGTCAGAAAAGAGCACAGCTCTTCGCTGAAAGTCCCCCAGGGTTCCCTGCATCTGTGGCAGAGAAAGTaGCACGGCCCCACCCCATCA +
Preference number: 2 (lower is better)
Translates to: LVRKEHSSSLKVPQGSLHLWQRK*HGPTPS
Trigger: TGATGGGGTGGGGCCGTGGCACTTTCTCTGCCACAG...ATGCAGGGAACCCTGGGGGACTTTCAGCGAAGAGCTGTGCTCTTTTCTGACTAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
3UTR-3UTR TCA 90 bp GCTGTGGCAGAGAAAGTGCCACGGCCCCACCCCATCACCAGATTCAGTAGAAAGGGGCAGAGAGAAATATaGAGTCACTTGAGTGCCTGG +
Preference number: 2 (lower is better)
Translates to: AVAEKVPRPHPITRFSRKGQREI*SHLSAW
Trigger: CCAGGCACTCAAGTGACTTCATATTTCTCTCTGCCC...CTTTCTACTGAATCTGGTGATGGGGTGGGGCCGTGGCACTTTCTCTGCCACAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
3UTR-3UTR CCA 90 bp GCTGTGGCAGAGAAAGTGCCACGGCCCCACCCCATCACCAGATTCAGTAGAAAGTTGACTTGCCGAGGGTaGCAATCCCTGGTAAGATTT +
Preference number: 2 (lower is better)
Translates to: AVAEKVPRPHPITRFSRKLTCRG*QSLVRF
Trigger: AAATCTTACCAGGGATTGCCACCCTCGGCAAGTCAA...CTTTCTACTGAATCTGGTGATGGGGTGGGGCCGTGGCACTTTCTCTGCCACAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448464.6
3UTR-3UTR TCA 90 bp AAGTGCCACGGCCCCACCCCATCACCAGATTCAGTAGAAAGGCCCTTGGAATTTGCAGGACAGGCTCCATaGCAGAGGATTTTTCACTCT +
Preference number: 2 (lower is better)
Translates to: KCHGPTPSPDSVERPLEFAGQAP*QRIFHS
Trigger: AGAGTGAAAAATCCTCTGTCATGGAGCCTGTCCTGC...AAATTCCAAGGGCCTTTCTACTGAATCTGGTGATGGGGTGGGGCCGTGGCACTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
3UTR CAA 90 bp CTCAGATGCCATGAAAGACATCATCACCAGACAGTCCCCACACTCTaGCCACTTGGCAGGACAGGCTCCATGACAGAGGATTTTTCACTC +
Preference number: 2 (lower is better)
Translates to: LRCHERHHHQTVPTL*PLGRTGSMTEDFSL
Trigger: GAGTGAAAAATCCTCTGTCATGGAGCCTGTCCTGCCAAGTGGCAAGAGTGTGGGGACTGTCTGGTGATGATGTCTTTCATGGCATCTGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
3UTR-3UTR TCA 90 bp AAGAAGGCACATGTACAGTCTACAATACTCTTCAGTCTCCCTAACTCATGCCCTAGCACAGCTCTTCGCTaGAAGTCCCCCAGGGTTCCC +
Preference number: 2 (lower is better)
Translates to: KKAHVQSTILFSLPNSCPSTALR*KSPRVP
Trigger: GGGAACCCTGGGGGACTTTCAGCGAAGAGCTGTGCT...AGGGCATGAGTTAGGGAGACTGAAGAGTATTGTAGACTGTACATGTGCCTTCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
3UTR CAA 90 bp AAGTGCCACGGCCCCACCCCATCACCAGATTCAGTAGAAAGGCCCTaGGAATTTCCTACAAGGTTCAGTTCTGAACAGCTCCACTTCAAA +
Preference number: 2 (lower is better)
Translates to: KCHGPTPSPDSVERP*EFPTRFSSEQLHFK
Trigger: TTTGAAGTGGAGCTGTTCAGAACTGAACCTTGTAGGAAATTCCAAGGGCCTTTCTACTGAATCTGGTGATGGGGTGGGGCCGTGGCACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
3UTR CAA 90 bp GCCATTGTGCTTGACTTGCCGAGGGTGGCAATCCCTGGTAAGATTTaGGCGACGAAGGCTATTTCTGTTAAGAGGCTGTCTTTCACTGTG +
Preference number: 2 (lower is better)
Translates to: AIVLDLPRVAIPGKI*ATKAISVKRLSFTV
Trigger: CACAGTGAAAGACAGCCTCTTAACAGAAATAGCCTTCGTCGCCAAAATCTTACCAGGGATTGCCACCCTCGGCAAGTCAAGCACAATGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448464.6
3UTR-3UTR TCA 90 bp CTAGTCAGAAAAGAGCACAGCTCTTCGCTGAAAGTCCCCCAGGGTTCCCTGCATTTCCAAATTTATAGCTaGTGCGAGGTGAGGAGTGGA +
Preference number: 2 (lower is better)
Translates to: LVRKEHSSSLKVPQGSLHFQIYS*CEVRSG
Trigger: TCCACTCCTCACCTCGCATCAGCTATAAATTTGGAA...ATGCAGGGAACCCTGGGGGACTTTCAGCGAAGAGCTGTGCTCTTTTCTGACTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
3UTR-3UTR CCA 90 bp GTAGAAAGGCCCTTGGAATTTCCTACAAGGTTCAGTTCTGAACAGCTCCACTTCCACACTCTTGCCACTTaGCAGGACAGGCTCCATGAC +
Preference number: 2 (lower is better)
Translates to: VERPLEFPTRFSSEQLHFHTLAT*QDRLHD
Trigger: GTCATGGAGCCTGTCCTGCCAAGTGGCAAGAGTGTG...GAAGTGGAGCTGTTCAGAACTGAACCTTGTAGGAAATTCCAAGGGCCTTTCTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
3UTR-3UTR TCA 90 bp CTAGTCAGAAAAGAGCACAGCTCTTCGCTGAAAGTCCCCCAGGGTTCCCTGCATTACAAGGTTCAGTTCTaGACAGCTCCACTTCAAATC +
Preference number: 2 (lower is better)
Translates to: LVRKEHSSSLKVPQGSLHYKVQF*TAPLQI
Trigger: GATTTGAAGTGGAGCTGTTCAGAACTGAACCTTGTA...ATGCAGGGAACCCTGGGGGACTTTCAGCGAAGAGCTGTGCTCTTTTCTGACTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
3UTR-3UTR TCA 90 bp ACAAGTGCCTCTGTCTACAACACCTGTAATGTCTGTACCACGTCATGCAGTCACTGCCCCATTTCATTTTaGGCTTCCACTTCTGTGCCC +
Preference number: 2 (lower is better)
Translates to: TSASVYNTCNVCTTSCSHCPISF*ASTSVP
Trigger: GGGCACAGAAGTGGAAGCTCAAAATGAAATGGGGCA...GTGACTGCATGACGTGGTACAGACATTACAGGTGTTGTAGACAGAGGCACTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448464.6
3UTR-3UTR GCA 90 bp AAGTGCCACGGCCCCACCCCATCACCAGATTCAGTAGAAAGGCCCTTGGAATTTGTCTGTACCACGTCATaGAGTCACATTGGAATTACT +
Preference number: 2 (lower is better)
Translates to: KCHGPTPSPDSVERPLEFVCTTS*SHIGIT
Trigger: AGTAATTCCAATGTGACTGCATGACGTGGTACAGAC...AAATTCCAAGGGCCTTTCTACTGAATCTGGTGATGGGGTGGGGCCGTGGCACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
3UTR-3UTR TCA 90 bp AAGAAGGCACATGTACAGTCTACAATACTCTTCAGTCTCCCTAACTCATGCCCTGGGCAGAGAGAAATATaGAGTCACTTGAGTGCCTGG +
Preference number: 2 (lower is better)
Translates to: KKAHVQSTILFSLPNSCPGQREI*SHLSAW
Trigger: CCAGGCACTCAAGTGACTTCATATTTCTCTCTGCCC...AGGGCATGAGTTAGGGAGACTGAAGAGTATTGTAGACTGTACATGTGCCTTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
3UTR CAA 90 bp TTATCCACTGGGAAGGGCGAAAGCTCTTGGGTTGTTCCAGAAAAGTaGTATGAGCAGCAAGAGCTGCAACATAACAATGAATATGCTGCC +
Preference number: 2 (lower is better)
Translates to: LSTGKGESSWVVPEK*YEQQELQHNNEYAA
Trigger: GGCAGCATATTCATTGTTATGTTGCAGCTCTTGCTGCTCATACAACTTTTCTGGAACAACCCAAGAGCTTTCGCCCTTCCCAGTGGATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448464.6
3UTR-3UTR TCA 90 bp AAGAAGGCACATGTACAGTCTACAATACTCTTCAGTCTCCCTAACTCATGCCCTCATACACTCCAAGCCTaGAACACACATCTAACCTCC +
Preference number: 2 (lower is better)
Translates to: KKAHVQSTILFSLPNSCPHTLQA*NTHLTS
Trigger: GGAGGTTAGATGTGTGTTTCAGGCTTGGAGTGTATG...AGGGCATGAGTTAGGGAGACTGAAGAGTATTGTAGACTGTACATGTGCCTTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
3UTR-3UTR CCA 90 bp GTAGAAAGGCCCTTGGAATTTCCTACAAGGTTCAGTTCTGAACAGCTCCACTTCAGGAGTGGACAGAATTaGCGGGAAGGAATAGTAACA +
Preference number: 2 (lower is better)
Translates to: VERPLEFPTRFSSEQLHFRSGQN*REGIVT
Trigger: TGTTACTATTCCTTCCCGCCAATTCTGTCCACTCCT...GAAGTGGAGCTGTTCAGAACTGAACCTTGTAGGAAATTCCAAGGGCCTTTCTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
3UTR-3UTR CCA 90 bp CTTGCCACTTGGCAGGACAGGCTCCATGACAGAGGATTTTTCACTCTGTGGAAAAGTCACTTGAGTGCCTaGACAAGTACTTCCAAATTT +
Preference number: 2 (lower is better)
Translates to: LATWQDRLHDRGFFTLWKSHLSA*TSTSKF
Trigger: AAATTTGGAAGTACTTGTCCAGGCACTCAAGTGACT...TTTCCACAGAGTGAAAAATCCTCTGTCATGGAGCCTGTCCTGCCAAGTGGCAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
3UTR-3UTR CCA 90 bp ACTCATTTTTGGCAAAGTGCTGTATTGTTCAGTCTGTGTACAAAACTGACCATCCACACTCTTGCCACTTaGCAGGACAGGCTCCATGAC +
Preference number: 2 (lower is better)
Translates to: THFWQSAVLFSLCTKLTIHTLAT*QDRLHD
Trigger: GTCATGGAGCCTGTCCTGCCAAGTGGCAAGAGTGTG...GATGGTCAGTTTTGTACACAGACTGAACAATACAGCACTTTGCCAAAAATGAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
3UTR-3UTR CCA 90 bp TTTGACGTCTTCCACTCCAAACGCTCTAATCTAGTCAGAAAAGAGCACAGCTCTATCAGTCAGAGTGGATaGCTCAGCAAAACCCATCAC +
Preference number: 2 (lower is better)
Translates to: FDVFHSKRSNLVRKEHSSISQSG*LSKTHH
Trigger: GTGATGGGTTTTGCTGAGCCATCCACTCTGACTGAT...AGAGCTGTGCTCTTTTCTGACTAGATTAGAGCGTTTGGAGTGGAAGACGTCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
3UTR-3UTR CCA 90 bp GTAGAAAGGCCCTTGGAATTTCCTACAAGGTTCAGTTCTGAACAGCTCCACTTCAAGGGCGAAAGCTCTTaGGTTGTTCCAGAAAAGTTG +
Preference number: 2 (lower is better)
Translates to: VERPLEFPTRFSSEQLHFKGESS*VVPEKL
Trigger: CAACTTTTCTGGAACAACCCAAGAGCTTTCGCCCTT...GAAGTGGAGCTGTTCAGAACTGAACCTTGTAGGAAATTCCAAGGGCCTTTCTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448464.6
3UTR CAA 90 bp TTCACTGTGTTCTTTTATCCACTGGGAAGGGCGAAAGCTCTTGGGTaGTTCCAGAAAAGTTGTATGAGCAGCAAGAGCTGCAACATAACA +
Preference number: 2 (lower is better)
Translates to: FTVFFYPLGRAKALG*FQKSCMSSKSCNIT
Trigger: TGTTATGTTGCAGCTCTTGCTGCTCATACAACTTTTCTGGAACAACCCAAGAGCTTTCGCCCTTCCCAGTGGATAAAAGAACACAGTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448464.6
3UTR-3UTR GCA 90 bp AAGAAGGCACATGTACAGTCTACAATACTCTTCAGTCTCCCTAACTCATGCCCTGTCTGTACCACGTCATaGAGTCACATTGGAATTACT +
Preference number: 2 (lower is better)
Translates to: KKAHVQSTILFSLPNSCPVCTTS*SHIGIT
Trigger: AGTAATTCCAATGTGACTGCATGACGTGGTACAGAC...AGGGCATGAGTTAGGGAGACTGAAGAGTATTGTAGACTGTACATGTGCCTTCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
3UTR-3UTR GCA 90 bp TTTGACGTCTTCCACTCCAAACGCTCTAATCTAGTCAGAAAAGAGCACAGCTCTCACTCTTCACTCAGATaGCATGAAAGACATCATCAC +
Preference number: 2 (lower is better)
Translates to: FDVFHSKRSNLVRKEHSSHSSLR*HERHHH
Trigger: GTGATGATGTCTTTCATGGCATCTGAGTGAAGAGTG...AGAGCTGTGCTCTTTTCTGACTAGATTAGAGCGTTTGGAGTGGAAGACGTCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
3UTR-3UTR GCA 90 bp AAGAAGGCACATGTACAGTCTACAATACTCTTCAGTCTCCCTAACTCATGCCCTATTGTCCACTTAAGCTaGCTGCCTTTCAAGAGTAAC +
Preference number: 2 (lower is better)
Translates to: KKAHVQSTILFSLPNSCPIVHLS*LPFKSN
Trigger: GTTACTCTTGAAAGGCAGGCAGCTTAAGTGGACAAT...AGGGCATGAGTTAGGGAGACTGAAGAGTATTGTAGACTGTACATGTGCCTTCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
3UTR-3UTR CCA 90 bp CTAAGAAACTCATTCACGAAGCACTGCTTGTGTACACCACATATTCCAGACTTTGGAAATCAGTCAGAGTaGATGGCTCAGCAAAACCCA +
Preference number: 2 (lower is better)
Translates to: LRNSFTKHCLCTPHIPDFGNQSE*MAQQNP
Trigger: TGGGTTTTGCTGAGCCATCCACTCTGACTGATTTCC...AAAGTCTGGAATATGTGGTGTACACAAGCAGTGCTTCGTGAATGAGTTTCTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
3UTR-3UTR CCA 90 bp ACTCATTTTTGGCAAAGTGCTGTATTGTTCAGTCTGTGTACAAAACTGACCATCAACCTCCCCAGGTACTaGTTTGGTTTTCAGAGGTCC +
Preference number: 2 (lower is better)
Translates to: THFWQSAVLFSLCTKLTINLPRY*FGFQRS
Trigger: GGACCTCTGAAAACCAAACCAGTACCTGGGGAGGTT...GATGGTCAGTTTTGTACACAGACTGAACAATACAGCACTTTGCCAAAAATGAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
3UTR-3UTR TCA 90 bp TTTGACGTCTTCCACTCCAAACGCTCTAATCTAGTCAGAAAAGAGCACAGCTCTAAATATGAAGTCACTTaGGTGCCTGGACAAGTACTT +
Preference number: 2 (lower is better)
Translates to: FDVFHSKRSNLVRKEHSSKYEVT*VPGQVL
Trigger: AAGTACTTGTCCAGGCACTCAAGTGACTTCATATTT...AGAGCTGTGCTCTTTTCTGACTAGATTAGAGCGTTTGGAGTGGAAGACGTCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
3UTR-3UTR TCA 90 bp TTCAGAAGCAGAAACAATGCTGAACAGCCTGCTCAAGTTTTAAATAAACTGTCTGCAGGACAGGCTCCATaGCAGAGGATTTTTCACTCT +
Preference number: 2 (lower is better)
Translates to: FRSRNNAEQPAQVLNKLSAGQAP*QRIFHS
Trigger: AGAGTGAAAAATCCTCTGTCATGGAGCCTGTCCTGC...AGACAGTTTATTTAAAACTTGAGCAGGCTGTTCAGCATTGTTTCTGCTTCTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
3UTR-3UTR TCA 90 bp CTAAGAAACTCATTCACGAAGCACTGCTTGTGTACACCACATATTCCAGACTTTTTCACTCAGATGCCATaGAAGACATCATCACCAGAC +
Preference number: 2 (lower is better)
Translates to: LRNSFTKHCLCTPHIPDFFTQMP*KTSSPD
Trigger: GTCTGGTGATGATGTCTTTCATGGCATCTGAGTGAA...AAAGTCTGGAATATGTGGTGTACACAAGCAGTGCTTCGTGAATGAGTTTCTTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
3UTR-3UTR TCA 90 bp TACAAACATATACTACTAGTGTCTCCCAGTACAAGGAGCAGTCTCTTGACTCAAATAGAATCCTCACAGTaGCTCTGTGAGGGAGGTAAA +
Preference number: 2 (lower is better)
Translates to: YKHILLVSPSTRSSLLTQIESSQ*LCEGGK
Trigger: TTTACCTCCCTCACAGAGTCACTGTGAGGATTCTAT...TTGAGTCAAGAGACTGCTCCTTGTACTGGGAGACACTAGTAGTATATGTTTGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
3UTR-3UTR TCA 90 bp ACTCATTTTTGGCAAAGTGCTGTATTGTTCAGTCTGTGTACAAAACTGACCATCTGCGGAAAAAGGAAGTaGCTGGCTAGAGGTAAGGAA +
Preference number: 2 (lower is better)
Translates to: THFWQSAVLFSLCTKLTICGKRK*LARGKE
Trigger: TTCCTTACCTCTAGCCAGTCACTTCCTTTTTCCGCA...GATGGTCAGTTTTGTACACAGACTGAACAATACAGCACTTTGCCAAAAATGAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
3UTR-3UTR GCA 90 bp ACTCATTTTTGGCAAAGTGCTGTATTGTTCAGTCTGTGTACAAAACTGACCATCAGTCTCCCTAACTCATaGCCTGCCCCTATAAAGGAA +
Preference number: 2 (lower is better)
Translates to: THFWQSAVLFSLCTKLTISLPNS*PAPIKE
Trigger: TTCCTTTATAGGGGCAGGGCATGAGTTAGGGAGACT...GATGGTCAGTTTTGTACACAGACTGAACAATACAGCACTTTGCCAAAAATGAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
3UTR-3UTR CCA 90 bp TACAAACATATACTACTAGTGTCTCCCAGTACAAGGAGCAGTCTCTTGACTCAAAGGAGTGGACAGAATTaGCGGGAAGGAATAGTAACA +
Preference number: 2 (lower is better)
Translates to: YKHILLVSPSTRSSLLTQRSGQN*REGIVT
Trigger: TGTTACTATTCCTTCCCGCCAATTCTGTCCACTCCT...TTGAGTCAAGAGACTGCTCCTTGTACTGGGAGACACTAGTAGTATATGTTTGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
3UTR-3UTR CCA 90 bp AAGAAGGCACATGTACAGTCTACAATACTCTTCAGTCTCCCTAACTCATGCCCTAGTCACTTGAGTGCCTaGACAAGTACTTCCAAATTT +
Preference number: 2 (lower is better)
Translates to: KKAHVQSTILFSLPNSCPSHLSA*TSTSKF
Trigger: AAATTTGGAAGTACTTGTCCAGGCACTCAAGTGACT...AGGGCATGAGTTAGGGAGACTGAAGAGTATTGTAGACTGTACATGTGCCTTCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
3UTR-3UTR TCA 90 bp TCACTCTGTGGAAATATAAAGCCTATCTCTTTTCCCATGGGCAGAGAGAAATATTTCCAAATTTATAGCTaGTGCGAGGTGAGGAGTGGA +
Preference number: 2 (lower is better)
Translates to: SLCGNIKPISFPMGREKYFQIYS*CEVRSG
Trigger: TCCACTCCTCACCTCGCATCAGCTATAAATTTGGAA...ATATTTCTCTCTGCCCATGGGAAAAGAGATAGGCTTTATATTTCCACAGAGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
3UTR-3UTR TCA 90 bp CTAAGAAACTCATTCACGAAGCACTGCTTGTGTACACCACATATTCCAGACTTTTACAAGGTTCAGTTCTaGACAGCTCCACTTCAAATC +
Preference number: 2 (lower is better)
Translates to: LRNSFTKHCLCTPHIPDFYKVQF*TAPLQI
Trigger: GATTTGAAGTGGAGCTGTTCAGAACTGAACCTTGTA...AAAGTCTGGAATATGTGGTGTACACAAGCAGTGCTTCGTGAATGAGTTTCTTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
3UTR-3UTR GCA 90 bp GTAGAAAGGCCCTTGGAATTTCCTACAAGGTTCAGTTCTGAACAGCTCCACTTCAATGAAAATGAAAGATaGCTATTCTCGTACTTGGGA +
Preference number: 2 (lower is better)
Translates to: VERPLEFPTRFSSEQLHFNENER*LFSYLG
Trigger: TCCCAAGTACGAGAATAGGCATCTTTCATTTTCATT...GAAGTGGAGCTGTTCAGAACTGAACCTTGTAGGAAATTCCAAGGGCCTTTCTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
3UTR-3UTR GCA 90 bp CGTGTATTCAGAGTTTTACATCCTGAAGACATTAAGCTGGTCTATTTTCAAGTTTCTGCACGAGACAAGTaGCTCTGTCTACAACACCTG +
Preference number: 2 (lower is better)
Translates to: RVFRVLHPEDIKLVYFQVSARDK*LCLQHL
Trigger: CAGGTGTTGTAGACAGAGGCACTTGTCTCGTGCAGA...AACTTGAAAATAGACCAGCTTAATGTCTTCAGGATGTAAAACTCTGAATACACG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
3UTR-3UTR GCA 90 bp TTTGACGTCTTCCACTCCAAACGCTCTAATCTAGTCAGAAAAGAGCACAGCTCTAAAAGTCACTTGGACTaGAGGGAAGAATACTTACAA +
Preference number: 2 (lower is better)
Translates to: FDVFHSKRSNLVRKEHSSKSHLD*REEYLQ
Trigger: TTGTAAGTATTCTTCCCTGCAGTCCAAGTGACTTTT...AGAGCTGTGCTCTTTTCTGACTAGATTAGAGCGTTTGGAGTGGAAGACGTCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
3UTR-3UTR CCA 90 bp ACTCATTTTTGGCAAAGTGCTGTATTGTTCAGTCTGTGTACAAAACTGACCATCTGTTCTTTTATCCACTaGGAAGGGCGAAAGCTCTTG +
Preference number: 2 (lower is better)
Translates to: THFWQSAVLFSLCTKLTICSFIH*EGRKLL
Trigger: CAAGAGCTTTCGCCCTTCCCAGTGGATAAAAGAACA...GATGGTCAGTTTTGTACACAGACTGAACAATACAGCACTTTGCCAAAAATGAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000448464.6
3UTR-3UTR TCA 90 bp CTAACAACTTACATGCAATGTATGAAAAAGAGACGCCGTGTATTCAGAGTTTTATGCGGAAAAAGGAAGTaGCTGGCTAGAGGTAAGGAA +
Preference number: 2 (lower is better)
Translates to: LTTYMQCMKKRRRVFRVLCGKRK*LARGKE
Trigger: TTCCTTACCTCTAGCCAGTCACTTCCTTTTTCCGCA...TAAAACTCTGAATACACGGCGTCTCTTTTTCATACATTGCATGTAAGTTGTTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
3UTR-3UTR TCA 90 bp ACTCATTTTTGGCAAAGTGCTGTATTGTTCAGTCTGTGTACAAAACTGACCATCACAAAATCTCATGGCTaGACTTCTGTAGCTTGTGAG +
Preference number: 2 (lower is better)
Translates to: THFWQSAVLFSLCTKLTITKSHG*TSVACE
Trigger: CTCACAAGCTACAGAAGTTCAGCCATGAGATTTTGT...GATGGTCAGTTTTGTACACAGACTGAACAATACAGCACTTTGCCAAAAATGAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
3UTR-3UTR TCA 90 bp TCGTATAAAACATACACACCTTCATGGAAACTATCTTATCTCCCAACTCTGGTATCCAGAAAAGTTGTATaGGCAGCAAGAGCTGCAACA +
Preference number: 2 (lower is better)
Translates to: SYKTYTPSWKLSYLPTLVSRKVV*AARAAT
Trigger: TGTTGCAGCTCTTGCTGCTCATACAACTTTTCTGGA...TACCAGAGTTGGGAGATAAGATAGTTTCCATGAAGGTGTGTATGTTTTATACGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448464.6
3UTR-3UTR CCA 90 bp CTAAGAAACTCATTCACGAAGCACTGCTTGTGTACACCACATATTCCAGACTTTAAACAGAGGCCAGAGTaGTTAAAGATTTTGCCTGAA +
Preference number: 2 (lower is better)
Translates to: LRNSFTKHCLCTPHIPDFKQRPE*LKILPE
Trigger: TTCAGGCAAAATCTTTAACCACTCTGGCCTCTGTTT...AAAGTCTGGAATATGTGGTGTACACAAGCAGTGCTTCGTGAATGAGTTTCTTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
3UTR-3UTR CCA 90 bp CTAACAACTTACATGCAATGTATGAAAAAGAGACGCCGTGTATTCAGAGTTTTAATCAGTCAGAGTGGATaGCTCAGCAAAACCCATCAC +
Preference number: 2 (lower is better)
Translates to: LTTYMQCMKKRRRVFRVLISQSG*LSKTHH
Trigger: GTGATGGGTTTTGCTGAGCCATCCACTCTGACTGAT...TAAAACTCTGAATACACGGCGTCTCTTTTTCATACATTGCATGTAAGTTGTTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
3UTR-3UTR CCA 90 bp TCGTATAAAACATACACACCTTCATGGAAACTATCTTATCTCCCAACTCTGGTATCCCTGGTAAGATTTTaGCGACGAAGGCTATTTCTG +
Preference number: 2 (lower is better)
Translates to: SYKTYTPSWKLSYLPTLVSLVRF*RRRLFL
Trigger: CAGAAATAGCCTTCGTCGCCAAAATCTTACCAGGGA...TACCAGAGTTGGGAGATAAGATAGTTTCCATGAAGGTGTGTATGTTTTATACGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448464.6
3UTR-3UTR TCA 90 bp AACTCTTGTTCTAAAGAGACATTCTGGCACTTCATCACAGCCAGTAGAAGAACAAGGCAAGGCATTATGTaGTACACAGCATATAAATCT +
Preference number: 2 (lower is better)
Translates to: NSCSKETFWHFITASRRTRQGIM*YTAYKS
Trigger: AGATTTATATGCTGTGTATCACATAATGCCTTGCCT...TGTTCTTCTACTGGCTGTGATGAAGTGCCAGAATGTCTCTTTAGAACAAGAGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
3UTR-3UTR TCA 90 bp CGTGTATTCAGAGTTTTACATCCTGAAGACATTAAGCTGGTCTATTTTCAAGTTATCTCACTACACATTTaGCGTCTTCCACTCCAAACG +
Preference number: 2 (lower is better)
Translates to: RVFRVLHPEDIKLVYFQVISLHI*RLPLQT
Trigger: CGTTTGGAGTGGAAGACGTCAAATGTGTAGTGAGAT...AACTTGAAAATAGACCAGCTTAATGTCTTCAGGATGTAAAACTCTGAATACACG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
3UTR-3UTR GCA 90 bp AACTCTTGTTCTAAAGAGACATTCTGGCACTTCATCACAGCCAGTAGAAGAACATCACATTGGAATTACTaGATGCACTCTTCACTAAAG +
Preference number: 2 (lower is better)
Translates to: NSCSKETFWHFITASRRTSHWNY*MHSSLK
Trigger: CTTTAGTGAAGAGTGCATGCAGTAATTCCAATGTGA...TGTTCTTCTACTGGCTGTGATGAAGTGCCAGAATGTCTCTTTAGAACAAGAGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
3UTR-3UTR GCA 90 bp TTGCCACAGAAGATAAATAATGGATGGCTAATTTTCACCTTACAGTGCAGTACAATGAAGTCACTTGAGTaGCTGGACAAGTACTTCCAA +
Preference number: 2 (lower is better)
Translates to: LPQKINNGWLIFTLQCSTMKSLE*LDKYFQ
Trigger: TTGGAAGTACTTGTCCAGGCACTCAAGTGACTTCAT...TGTACTGCACTGTAAGGTGAAAATTAGCCATCCATTATTTATCTTCTGTGGCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
3UTR-3UTR CCA 90 bp TTGCCACAGAAGATAAATAATGGATGGCTAATTTTCACCTTACAGTGCAGTACAGTCATGCAGTCACATTaGAATTACTGCATGCACTCT +
Preference number: 2 (lower is better)
Translates to: LPQKINNGWLIFTLQCSTVMQSH*NYCMHS
Trigger: AGAGTGCATGCAGTAATTCCAATGTGACTGCATGAC...TGTACTGCACTGTAAGGTGAAAATTAGCCATCCATTATTTATCTTCTGTGGCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
3UTR-3UTR CCA 90 bp TCGTATAAAACATACACACCTTCATGGAAACTATCTTATCTCCCAACTCTGGTATCTAAAGAGACATTCTaGCACTTCATCACAGCCAGT +
Preference number: 2 (lower is better)
Translates to: SYKTYTPSWKLSYLPTLVSKETF*HFITAS
Trigger: ACTGGCTGTGATGAAGTGCCAGAATGTCTCTTTAGA...TACCAGAGTTGGGAGATAAGATAGTTTCCATGAAGGTGTGTATGTTTTATACGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
3UTR-3UTR CCA 90 bp ACTCATTTTTGGCAAAGTGCTGTATTGTTCAGTCTGTGTACAAAACTGACCATCACAAAATTTAGACCGTaGCTCAAGAAAACAAGCTGC +
Preference number: 2 (lower is better)
Translates to: THFWQSAVLFSLCTKLTITKFRP*LKKTSC
Trigger: GCAGCTTGTTTTCTTGAGCCACGGTCTAAATTTTGT...GATGGTCAGTTTTGTACACAGACTGAACAATACAGCACTTTGCCAAAAATGAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
3UTR-3UTR TCA 90 bp GAAAGTCCAGCCATAATTCCATTATATCCATGGCAACTATCACCTGTTAATGCTAGGCAAGGCATTATGTaGTACACAGCATATAAATCT +
Preference number: 2 (lower is better)
Translates to: ESPAIIPLYPWQLSPVNARQGIM*YTAYKS
Trigger: AGATTTATATGCTGTGTATCACATAATGCCTTGCCT...AGCATTAACAGGTGATAGTTGCCATGGATATAATGGAATTATGGCTGGACTTTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
3UTR-3UTR TCA 90 bp TTCAGAAGCAGAAACAATGCTGAACAGCCTGCTCAAGTTTTAAATAAACTGTCTCTTACATGCAATGTATaGAAAAGAGACGCCGTGTAT +
Preference number: 2 (lower is better)
Translates to: FRSRNNAEQPAQVLNKLSLTCNV*KRDAVY
Trigger: ATACACGGCGTCTCTTTTTCATACATTGCATGTAAG...AGACAGTTTATTTAAAACTTGAGCAGGCTGTTCAGCATTGTTTCTGCTTCTGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
3UTR-3UTR GCA 90 bp CTAACAACTTACATGCAATGTATGAAAAAGAGACGCCGTGTATTCAGAGTTTTAATGAAGTCACTTGAGTaGCTGGACAAGTACTTCCAA +
Preference number: 2 (lower is better)
Translates to: LTTYMQCMKKRRRVFRVLMKSLE*LDKYFQ
Trigger: TTGGAAGTACTTGTCCAGGCACTCAAGTGACTTCAT...TAAAACTCTGAATACACGGCGTCTCTTTTTCATACATTGCATGTAAGTTGTTAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
3UTR-3UTR GCA 90 bp CGTGTATTCAGAGTTTTACATCCTGAAGACATTAAGCTGGTCTATTTTCAAGTTCACTCTTCACTCAGATaGCATGAAAGACATCATCAC +
Preference number: 2 (lower is better)
Translates to: RVFRVLHPEDIKLVYFQVHSSLR*HERHHH
Trigger: GTGATGATGTCTTTCATGGCATCTGAGTGAAGAGTG...AACTTGAAAATAGACCAGCTTAATGTCTTCAGGATGTAAAACTCTGAATACACG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
3UTR-3UTR GCA 90 bp ACTCATTTTTGGCAAAGTGCTGTATTGTTCAGTCTGTGTACAAAACTGACCATCAAAAGTCACTTGGACTaGAGGGAAGAATACTTACAA +
Preference number: 2 (lower is better)
Translates to: THFWQSAVLFSLCTKLTIKSHLD*REEYLQ
Trigger: TTGTAAGTATTCTTCCCTGCAGTCCAAGTGACTTTT...GATGGTCAGTTTTGTACACAGACTGAACAATACAGCACTTTGCCAAAAATGAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
3UTR-3UTR CCA 90 bp TTCAGAAGCAGAAACAATGCTGAACAGCCTGCTCAAGTTTTAAATAAACTGTCTAAACAGAGGCCAGAGTaGTTAAAGATTTTGCCTGAA +
Preference number: 2 (lower is better)
Translates to: FRSRNNAEQPAQVLNKLSKQRPE*LKILPE
Trigger: TTCAGGCAAAATCTTTAACCACTCTGGCCTCTGTTT...AGACAGTTTATTTAAAACTTGAGCAGGCTGTTCAGCATTGTTTCTGCTTCTGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
3UTR-3UTR CCA 90 bp TACAAACATATACTACTAGTGTCTCCCAGTACAAGGAGCAGTCTCTTGACTCAAAAAACTTTACAGACTTaGCCCCTAATTAGACAACAA +
Preference number: 2 (lower is better)
Translates to: YKHILLVSPSTRSSLLTQKTLQT*PLIRQQ
Trigger: TTGTTGTCTAATTAGGGGCCAAGTCTGTAAAGTTTT...TTGAGTCAAGAGACTGCTCCTTGTACTGGGAGACACTAGTAGTATATGTTTGTA
38% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
3UTR-3UTR GCA 90 bp GAAAGTCCAGCCATAATTCCATTATATCCATGGCAACTATCACCTGTTAATGCTAATGAAAATGAAAGATaGCTATTCTCGTACTTGGGA +
Preference number: 2 (lower is better)
Translates to: ESPAIIPLYPWQLSPVNANENER*LFSYLG
Trigger: TCCCAAGTACGAGAATAGGCATCTTTCATTTTCATT...AGCATTAACAGGTGATAGTTGCCATGGATATAATGGAATTATGGCTGGACTTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
3UTR-3UTR GCA 90 bp ACTCATTTTTGGCAAAGTGCTGTATTGTTCAGTCTGTGTACAAAACTGACCATCGAAGATACTCTTCCTTaGTCGTTTTTCTTAAGAGTA +
Preference number: 2 (lower is better)
Translates to: THFWQSAVLFSLCTKLTIEDTLP*SFFLRV
Trigger: TACTCTTAAGAAAAACGAGCAAGGAAGAGTATCTTC...GATGGTCAGTTTTGTACACAGACTGAACAATACAGCACTTTGCCAAAAATGAGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
3UTR-3UTR GCA 90 bp TTCAGAAGCAGAAACAATGCTGAACAGCCTGCTCAAGTTTTAAATAAACTGTCTATGAGCAGCAAGAGCTaGAACATAACAATGAATATG +
Preference number: 2 (lower is better)
Translates to: FRSRNNAEQPAQVLNKLSMSSKS*NITMNM
Trigger: CATATTCATTGTTATGTTGCAGCTCTTGCTGCTCAT...AGACAGTTTATTTAAAACTTGAGCAGGCTGTTCAGCATTGTTTCTGCTTCTGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448464.6
3UTR CAA 90 bp ACAATGTTTAAACAATGCTACACTCATTTTTGGCAAAGTGCTGTATaGTTCAGTCTGTGTACAAAACTGACCATCTATGAACCAATCAGT +
Preference number: 2 (lower is better)
Translates to: TMFKQCYTHFWQSAV*FSLCTKLTIYEPIS
Trigger: ACTGATTGGTTCATAGATGGTCAGTTTTGTACACAGACTGAACAATACAGCACTTTGCCAAAAATGAGTGTAGCATTGTTTAAACATTGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
3UTR-3UTR GCA 90 bp TTGCCACAGAAGATAAATAATGGATGGCTAATTTTCACCTTACAGTGCAGTACAATTTTCACCTTACAGTaGAGTACACAATTAGTTGAG +
Preference number: 2 (lower is better)
Translates to: LPQKINNGWLIFTLQCSTIFTLQ*STQLVE
Trigger: CTCAACTAATTGTGTACTGCACTGTAAGGTGAAAAT...TGTACTGCACTGTAAGGTGAAAATTAGCCATCCATTATTTATCTTCTGTGGCAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
3UTR-3UTR CCA 90 bp TCGTATAAAACATACACACCTTCATGGAAACTATCTTATCTCCCAACTCTGGTAGCCTATTCTCGTACTTaGGAAGAAATGTCTTTAAAA +
Preference number: 2 (lower is better)
Translates to: SYKTYTPSWKLSYLPTLVAYSRT*EEMSLK
Trigger: TTTTAAAGACATTTCTTCCCAAGTACGAGAATAGGC...TACCAGAGTTGGGAGATAAGATAGTTTCCATGAAGGTGTGTATGTTTTATACGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
3UTR-3UTR CCA 90 bp CGTGTATTCAGAGTTTTACATCCTGAAGACATTAAGCTGGTCTATTTTCAAGTTGCCTATTCTCGTACTTaGGAAGAAATGTCTTTAAAA +
Preference number: 2 (lower is better)
Translates to: RVFRVLHPEDIKLVYFQVAYSRT*EEMSLK
Trigger: TTTTAAAGACATTTCTTCCCAAGTACGAGAATAGGC...AACTTGAAAATAGACCAGCTTAATGTCTTCAGGATGTAAAACTCTGAATACACG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
3UTR-3UTR CAA 90 bp AAGTGCCACGGCCCCACCCCATCACCAGATTCAGTAGAAAGGCCCTTGGAATTTACCCAGCCATTGTGCTaGACTTGCCGAGGGTGGCAA +
Preference number: 3 (lower is better)
Translates to: KCHGPTPSPDSVERPLEFTQPLC*TCRGWQ
Trigger: TTGCCACCCTCGGCAAGTCAAGCACAATGGCTGGGT...AAATTCCAAGGGCCTTTCTACTGAATCTGGTGATGGGGTGGGGCCGTGGCACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448464.6
3UTR GCA 72 bp CACCAACACTGTGAAGAACAGCTGTGGCAGAGAAAGTaGCACGGCCCCACCCCATCACCAGATTCAGTAGAA +
Preference number: 3 (lower is better)
Translates to: HQHCEEQLWQRK*HGPTPSPDSVE
Trigger: TTCTACTGAATCTGGTGATGGGGTGGGGCCGTGGCACTTTCTCTGCCACAGCTGTTCTTCACAGTGTTGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
3UTR-3UTR CAA 90 bp CTAGTCAGAAAAGAGCACAGCTCTTCGCTGAAAGTCCCCCAGGGTTCCCTGCATGAGGAGTGGACAGAATaGGCGGGAAGGAATAGTAAC +
Preference number: 3 (lower is better)
Translates to: LVRKEHSSSLKVPQGSLHEEWTE*AGRNSN
Trigger: GTTACTATTCCTTCCCGCCAATTCTGTCCACTCCTC...ATGCAGGGAACCCTGGGGGACTTTCAGCGAAGAGCTGTGCTCTTTTCTGACTAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
3UTR CCA 72 bp ACATCATCACCAGACAGTCCCCACACTCTTGCCACTTaGCAGGACAGGCTCCATGACAGAGGATTTTTCACT +
Preference number: 3 (lower is better)
Translates to: TSSPDSPHTLAT*QDRLHDRGFFT
Trigger: AGTGAAAAATCCTCTGTCATGGAGCCTGTCCTGCCAAGTGGCAAGAGTGTGGGGACTGTCTGGTGATGATGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
3UTR-3UTR CAA 90 bp AAGAAGGCACATGTACAGTCTACAATACTCTTCAGTCTCCCTAACTCATGCCCTGCCATTGTGCTTGACTaGCCGAGGGTGGCAATCCCT +
Preference number: 3 (lower is better)
Translates to: KKAHVQSTILFSLPNSCPAIVLD*PRVAIP
Trigger: AGGGATTGCCACCCTCGGCAAGTCAAGCACAATGGC...AGGGCATGAGTTAGGGAGACTGAAGAGTATTGTAGACTGTACATGTGCCTTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448464.6
3UTR-3UTR CAA 90 bp GCTGTGGCAGAGAAAGTGCCACGGCCCCACCCCATCACCAGATTCAGTAGAAAGTGCCTATTCTCGTACTaGGGAAGAAATGTCTTTAAA +
Preference number: 3 (lower is better)
Translates to: AVAEKVPRPHPITRFSRKCLFSY*GRNVFK
Trigger: TTTAAAGACATTTCTTCCCAAGTACGAGAATAGGCA...CTTTCTACTGAATCTGGTGATGGGGTGGGGCCGTGGCACTTTCTCTGCCACAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
3UTR TCA 72 bp CTTGAGTGCCTGGACAAGTACTTCCAAATTTATAGCTaGTGCGAGGTGAGGAGTGGACAGAATTGGCGGGAA +
Preference number: 3 (lower is better)
Translates to: LECLDKYFQIYS*CEVRSGQNWRE
Trigger: TTCCCGCCAATTCTGTCCACTCCTCACCTCGCATCAGCTATAAATTTGGAAGTACTTGTCCAGGCACTCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
3UTR CCA 72 bp TTGACTTGCCGAGGGTGGCAATCCCTGGTAAGATTTTaGCGACGAAGGCTATTTCTGTTAAGAGGCTGTCTT +
Preference number: 3 (lower is better)
Translates to: LTCRGWQSLVRF*RRRLFLLRGCL
Trigger: AAGACAGCCTCTTAACAGAAATAGCCTTCGTCGCCAAAATCTTACCAGGGATTGCCACCCTCGGCAAGTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448464.6
3UTR-3UTR CAA 90 bp ACTCATTTTTGGCAAAGTGCTGTATTGTTCAGTCTGTGTACAAAACTGACCATCACAGTCCCCACACTCTaGCCACTTGGCAGGACAGGC +
Preference number: 3 (lower is better)
Translates to: THFWQSAVLFSLCTKLTITVPTL*PLGRTG
Trigger: GCCTGTCCTGCCAAGTGGCAAGAGTGTGGGGACTGT...GATGGTCAGTTTTGTACACAGACTGAACAATACAGCACTTTGCCAAAAATGAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
3UTR-3UTR CAA 90 bp AAGTGCCACGGCCCCACCCCATCACCAGATTCAGTAGAAAGGCCCTTGGAATTTAAAATGAAAAGTCACTaGGACTGCAGGGAAGAATAC +
Preference number: 3 (lower is better)
Translates to: KCHGPTPSPDSVERPLEFKMKSH*DCREEY
Trigger: GTATTCTTCCCTGCAGTCCAAGTGACTTTTCATTTT...AAATTCCAAGGGCCTTTCTACTGAATCTGGTGATGGGGTGGGGCCGTGGCACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
3UTR-3UTR CAA 90 bp ACAAGTGCCTCTGTCTACAACACCTGTAATGTCTGTACCACGTCATGCAGTCACGTTGTTCCAGAAAAGTaGTATGAGCAGCAAGAGCTG +
Preference number: 3 (lower is better)
Translates to: TSASVYNTCNVCTTSCSHVVPEK*YEQQEL
Trigger: CAGCTCTTGCTGCTCATACAACTTTTCTGGAACAAC...GTGACTGCATGACGTGGTACAGACATTACAGGTGTTGTAGACAGAGGCACTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448464.6
3UTR CCA 72 bp TGTGTTCTTTTATCCACTGGGAAGGGCGAAAGCTCTTaGGTTGTTCCAGAAAAGTTGTATGAGCAGCAAGAG +
Preference number: 3 (lower is better)
Translates to: CVLLSTGKGESS*VVPEKLYEQQE
Trigger: CTCTTGCTGCTCATACAACTTTTCTGGAACAACCCAAGAGCTTTCGCCCTTCCCAGTGGATAAAAGAACACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448464.6
3UTR GCA 72 bp TCTGTCTACAACACCTGTAATGTCTGTACCACGTCATaGAGTCACATTGGAATTACTGCATGCACTCTTCAC +
Preference number: 3 (lower is better)
Translates to: SVYNTCNVCTTS*SHIGITACTLH
Trigger: GTGAAGAGTGCATGCAGTAATTCCAATGTGACTGCATGACGTGGTACAGACATTACAGGTGTTGTAGACAGA
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
3UTR-3UTR CAA 90 bp TACAAACATATACTACTAGTGTCTCCCAGTACAAGGAGCAGTCTCTTGACTCAACGTCATGCAGTCACATaGGAATTACTGCATGCACTC +
Preference number: 3 (lower is better)
Translates to: YKHILLVSPSTRSSLLTQRHAVT*ELLHAL
Trigger: GAGTGCATGCAGTAATTCCAATGTGACTGCATGACG...TTGAGTCAAGAGACTGCTCCTTGTACTGGGAGACACTAGTAGTATATGTTTGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
3UTR-3UTR CAA 90 bp GTAGAAAGGCCCTTGGAATTTCCTACAAGGTTCAGTTCTGAACAGCTCCACTTCAAAATGAAAAGTCACTaGGACTGCAGGGAAGAATAC +
Preference number: 3 (lower is better)
Translates to: VERPLEFPTRFSSEQLHFKMKSH*DCREEY
Trigger: GTATTCTTCCCTGCAGTCCAAGTGACTTTTCATTTT...GAAGTGGAGCTGTTCAGAACTGAACCTTGTAGGAAATTCCAAGGGCCTTTCTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
3UTR-3UTR CAA 90 bp AACTCTTGTTCTAAAGAGACATTCTGGCACTTCATCACAGCCAGTAGAAGAACAGAAGGGCGAAAGCTCTaGGGTTGTTCCAGAAAAGTT +
Preference number: 3 (lower is better)
Translates to: NSCSKETFWHFITASRRTEGRKL*GCSRKV
Trigger: AACTTTTCTGGAACAACCCAAGAGCTTTCGCCCTTC...TGTTCTTCTACTGGCTGTGATGAAGTGCCAGAATGTCTCTTTAGAACAAGAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448464.6
3UTR TCA 72 bp AAAGCCTATCTCTTTTCCCATGGGCAGAGAGAAATATaGAGTCACTTGAGTGCCTGGACAAGTACTTCCAAA +
Preference number: 3 (lower is better)
Translates to: KAYLFSHGQREI*SHLSAWTSTSK
Trigger: TTTGGAAGTACTTGTCCAGGCACTCAAGTGACTTCATATTTCTCTCTGCCCATGGGAAAAGAGATAGGCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
3UTR-3UTR CAA 90 bp ACTCATTTTTGGCAAAGTGCTGTATTGTTCAGTCTGTGTACAAAACTGACCATCCGTCATGCAGTCACATaGGAATTACTGCATGCACTC +
Preference number: 3 (lower is better)
Translates to: THFWQSAVLFSLCTKLTIRHAVT*ELLHAL
Trigger: GAGTGCATGCAGTAATTCCAATGTGACTGCATGACG...GATGGTCAGTTTTGTACACAGACTGAACAATACAGCACTTTGCCAAAAATGAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
3UTR-3UTR CAA 90 bp TACAAACATATACTACTAGTGTCTCCCAGTACAAGGAGCAGTCTCTTGACTCAATTCACGAAGCACTGCTaGTGTACACCACATATTCCA +
Preference number: 3 (lower is better)
Translates to: YKHILLVSPSTRSSLLTQFTKHC*CTPHIP
Trigger: TGGAATATGTGGTGTACACAAGCAGTGCTTCGTGAA...TTGAGTCAAGAGACTGCTCCTTGTACTGGGAGACACTAGTAGTATATGTTTGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
3UTR-3UTR CAA 90 bp TCGTATAAAACATACACACCTTCATGGAAACTATCTTATCTCCCAACTCTGGTACTGCCCCATTTCATTTaGAGCTTCCACTTCTGTGCC +
Preference number: 3 (lower is better)
Translates to: SYKTYTPSWKLSYLPTLVLPHFI*SFHFCA
Trigger: GGCACAGAAGTGGAAGCTCAAAATGAAATGGGGCAG...TACCAGAGTTGGGAGATAAGATAGTTTCCATGAAGGTGTGTATGTTTTATACGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448464.6
3UTR TCA 72 bp AGAAAGGCCCTTGGAATTTCCTACAAGGTTCAGTTCTaGACAGCTCCACTTCAAATCAGTATAGAATCCTCA +
Preference number: 3 (lower is better)
Translates to: RKALGISYKVQF*TAPLQISIESS
Trigger: TGAGGATTCTATACTGATTTGAAGTGGAGCTGTTCAGAACTGAACCTTGTAGGAAATTCCAAGGGCCTTTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
3UTR GCA 72 bp TGTCTGTACCACGTCATGCAGTCACATTGGAATTACTaGATGCACTCTTCACTAAAGCTTAATGTACCTGAA +
Preference number: 3 (lower is better)
Translates to: CLYHVMQSHWNY*MHSSLKLNVPE
Trigger: TTCAGGTACATTAAGCTTTAGTGAAGAGTGCATGCAGTAATTCCAATGTGACTGCATGACGTGGTACAGACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
3UTR CCA 72 bp TGTAAATATGTTTACTTCAGAGGAAATCAGTCAGAGTaGATGGCTCAGCAAAACCCATCACAACTGCGGAAA +
Preference number: 3 (lower is better)
Translates to: CKYVYFRGNQSE*MAQQNPSQLRK
Trigger: TTTCCGCAGTTGTGATGGGTTTTGCTGAGCCATCCACTCTGACTGATTTCCTCTGAAGTAAACATATTTACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
3UTR-3UTR CAA 90 bp AGGGGGAATCTAACTCTTGTTCTAAAGAGACATTCTGGCACTTCATCACAGCCAGGAAAAACAAGCTGTTaGATTATGAAGGCAACACTT +
Preference number: 3 (lower is better)
Translates to: RGNLTLVLKRHSGTSSQPGKTSC*IMKATL
Trigger: AAGTGTTGCCTTCATAATCAAACAGCTTGTTTTTCC...TGGCTGTGATGAAGTGCCAGAATGTCTCTTTAGAACAAGAGTTAGATTCCCCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
3UTR-3UTR CAA 90 bp TTGCCACAGAAGATAAATAATGGATGGCTAATTTTCACCTTACAGTGCAGTACAGTGTTGTGGTTGGCCTaGTGTCTTACATACAGGAGA +
Preference number: 3 (lower is better)
Translates to: LPQKINNGWLIFTLQCSTVLWLA*CLTYRR
Trigger: TCTCCTGTATGTAAGACACAAGGCCAACCACAACAC...TGTACTGCACTGTAAGGTGAAAATTAGCCATCCATTATTTATCTTCTGTGGCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
3UTR-3UTR CAA 90 bp TCACTCTGTGGAAATATAAAGCCTATCTCTTTTCCCATGGGCAGAGAGAAATATATCCCTGGTAAGATTTaGGCGACGAAGGCTATTTCT +
Preference number: 3 (lower is better)
Translates to: SLCGNIKPISFPMGREKYIPGKI*ATKAIS
Trigger: AGAAATAGCCTTCGTCGCCAAAATCTTACCAGGGAT...ATATTTCTCTCTGCCCATGGGAAAAGAGATAGGCTTTATATTTCCACAGAGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448464.6
3UTR-3UTR CAA 90 bp TTCAGAAGCAGAAACAATGCTGAACAGCCTGCTCAAGTTTTAAATAAACTGTCTTCAGTAGAAAGGCCCTaGGAATTTCCTACAAGGTTC +
Preference number: 3 (lower is better)
Translates to: FRSRNNAEQPAQVLNKLSSVERP*EFPTRF
Trigger: GAACCTTGTAGGAAATTCCAAGGGCCTTTCTACTGA...AGACAGTTTATTTAAAACTTGAGCAGGCTGTTCAGCATTGTTTCTGCTTCTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
3UTR-3UTR CAA 90 bp TTGCCACAGAAGATAAATAATGGATGGCTAATTTTCACCTTACAGTGCAGTACACATCTCACTACACATTaGACGTCTTCCACTCCAAAC +
Preference number: 3 (lower is better)
Translates to: LPQKINNGWLIFTLQCSTHLTTH*TSSTPN
Trigger: GTTTGGAGTGGAAGACGTCAAATGTGTAGTGAGATG...TGTACTGCACTGTAAGGTGAAAATTAGCCATCCATTATTTATCTTCTGTGGCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
3UTR-3UTR CAA 90 bp TCGTATAAAACATACACACCTTCATGGAAACTATCTTATCTCCCAACTCTGGTACATCTCACTACACATTaGACGTCTTCCACTCCAAAC +
Preference number: 3 (lower is better)
Translates to: SYKTYTPSWKLSYLPTLVHLTTH*TSSTPN
Trigger: GTTTGGAGTGGAAGACGTCAAATGTGTAGTGAGATG...TACCAGAGTTGGGAGATAAGATAGTTTCCATGAAGGTGTGTATGTTTTATACGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
3UTR GCA 72 bp ATTCTCAACTATATACAAAACATTGTCCACTTAAGCTaGCTGCCTTTCAAGAGTAACTCTCCTCCCATGCAA +
Preference number: 3 (lower is better)
Translates to: ILNYIQNIVHLS*LPFKSNSPPMQ
Trigger: TTGCATGGGAGGAGAGTTACTCTTGAAAGGCAGGCAGCTTAAGTGGACAATGTTTTGTATATAGTTGAGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
3UTR TCA 72 bp CAAATCTGTTCATGTTGCCAAACAAAATCTCATGGCTaGACTTCTGTAGCTTGTGAGGTACTAACAACTTAC +
Preference number: 3 (lower is better)
Translates to: QICSCCQTKSHG*TSVACEVLTTY
Trigger: GTAAGTTGTTAGTACCTCACAAGCTACAGAAGTTCAGCCATGAGATTTTGTTTGGCAACATGAACAGATTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
3UTR-3UTR CAA 90 bp TTCAGAAGCAGAAACAATGCTGAACAGCCTGCTCAAGTTTTAAATAAACTGTCTGTAAACAGGAACAGTTaGCATGGGGATTGGAAAAAT +
Preference number: 3 (lower is better)
Translates to: FRSRNNAEQPAQVLNKLSVNRNS*HGDWKN
Trigger: ATTTTTCCAATCCCCATGCAAACTGTTCCTGTTTAC...AGACAGTTTATTTAAAACTTGAGCAGGCTGTTCAGCATTGTTTCTGCTTCTGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
3UTR-3UTR CAA 90 bp TCGTATAAAACATACACACCTTCATGGAAACTATCTTATCTCCCAACTCTGGTAGGAAAAACAAGCTGTTaGATTATGAAGGCAACACTT +
Preference number: 3 (lower is better)
Translates to: SYKTYTPSWKLSYLPTLVGKTSC*IMKATL
Trigger: AAGTGTTGCCTTCATAATCAAACAGCTTGTTTTTCC...TACCAGAGTTGGGAGATAAGATAGTTTCCATGAAGGTGTGTATGTTTTATACGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
3UTR-3UTR CAA 90 bp TTCAGAAGCAGAAACAATGCTGAACAGCCTGCTCAAGTTTTAAATAAACTGTCTCAGTTTGCATGGGGATaGGAAAAATGTATAGGAAAT +
Preference number: 3 (lower is better)
Translates to: FRSRNNAEQPAQVLNKLSQFAWG*EKCIGN
Trigger: ATTTCCTATACATTTTTCCAATCCCCATGCAAACTG...AGACAGTTTATTTAAAACTTGAGCAGGCTGTTCAGCATTGTTTCTGCTTCTGAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
3UTR-3UTR CAA 90 bp CTAACAACTTACATGCAATGTATGAAAAAGAGACGCCGTGTATTCAGAGTTTTATGCCTATTCTCGTACTaGGGAAGAAATGTCTTTAAA +
Preference number: 3 (lower is better)
Translates to: LTTYMQCMKKRRRVFRVLCLFSY*GRNVFK
Trigger: TTTAAAGACATTTCTTCCCAAGTACGAGAATAGGCA...TAAAACTCTGAATACACGGCGTCTCTTTTTCATACATTGCATGTAAGTTGTTAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
3UTR TCA 72 bp CCAAACAAAATCTCATGGCTGAACTTCTGTAGCTTGTaGGGTACTAACAACTTACATGCAATGTATGAAAAA +
Preference number: 3 (lower is better)
Translates to: PNKISWLNFCSL*GTNNLHAMYEK
Trigger: TTTTTCATACATTGCATGTAAGTTGTTAGTACCTCACAAGCTACAGAAGTTCAGCCATGAGATTTTGTTTGG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
3UTR CCA 72 bp TCAAAAGAAAGTCCAGCCATAATTCCATTATATCCATaGCAACTATCACCTGTTAATGCTAATGTTAGTGTG +
Preference number: 3 (lower is better)
Translates to: SKESPAIIPLYP*QLSPVNANVSV
Trigger: CACACTAACATTAGCATTAACAGGTGATAGTTGCCATGGATATAATGGAATTATGGCTGGACTTTCTTTTGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
3UTR CCA 72 bp GACATTAAGCTGGTCTATTTTCAAGTTACCAATGCATaGCCCTATAACAAACATCGTATAAAACATACACAC +
Preference number: 3 (lower is better)
Translates to: DIKLVYFQVTNA*PYNKHRIKHTH
Trigger: GTGTGTATGTTTTATACGATGTTTGTTATAGGGCCATGCATTGGTAACTTGAAAATAGACCAGCTTAATGTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
3UTR TCA 72 bp ATGTTTTCCAGTACCTCTTTCTCCACCCTAAACAGTTaGAATTTAATTGGTCTCAAATTTCAAGTGAAACTG +
Preference number: 3 (lower is better)
Translates to: MFSSTSFSTLNS*NLIGLKFQVKL
Trigger: CAGTTTCACTTGAAATTTGAGACCAATTAAATTTCAACTGTTTAGGGTGGAGAAAGAGGTACTGGAAAACAT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
CDS-3UTR TCA 90 bp CTGACGCGGGCAGGGCTGATGAACAACCCAGCCATTGTGCTTGACTTGCCGAGGGCGGGGCGGGACTGCTaGGGTAGCTGCGGTGGGGCC +
Preference number: 4 (lower is better)
Translates to: LTRAGLMNNPAIVLDLPRAGRDC*GSCGGA
Trigger: GGCCCCACCGCAGCTACCTCAGCAGTCCCGCCCCGC...CCTCGGCAAGTCAAGCACAATGGCTGGGTTGTTCATCAGCCCTGCCCGCGTCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448464.6
CDS-3UTR GCA 90 bp CTAGTCAGAAAAGAGCACAGCTCTTCGCTGAAAGTCCCCCAGGGTTCCCTGCATGCGGTGGGGCCGGGCTaGGCTGCACCTCGTTCAGGT +
Preference number: 4 (lower is better)
Translates to: LVRKEHSSSLKVPQGSLHAVGPG*AAPRSG
Trigger: ACCTGAACGAGGTGCAGCGCAGCCCGGCCCCACCGC...ATGCAGGGAACCCTGGGGGACTTTCAGCGAAGAGCTGTGCTCTTTTCTGACTAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
CDS-3UTR GCA 90 bp CTGACGCGGGCAGGGCTGATGAACAACCCAGCCATTGTGCTTGACTTGCCGAGGCTGTGGCAGAGAAAGTaGCACGGCCCCACCCCATCA +
Preference number: 4 (lower is better)
Translates to: LTRAGLMNNPAIVLDLPRLWQRK*HGPTPS
Trigger: TGATGGGGTGGGGCCGTGGCACTTTCTCTGCCACAG...CCTCGGCAAGTCAAGCACAATGGCTGGGTTGTTCATCAGCCCTGCCCGCGTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448464.6
CDS-3UTR GCA 90 bp AAGTGCCACGGCCCCACCCCATCACCAGATTCAGTAGAAAGGCCCTTGGAATTTGGGGCCGGGCTGCGCTaGACCTCGTTCAGGTACCCA +
Preference number: 4 (lower is better)
Translates to: KCHGPTPSPDSVERPLEFGAGLR*TSFRYP
Trigger: TGGGTACCTGAACGAGGTGCAGCGCAGCCCGGCCCC...AAATTCCAAGGGCCTTTCTACTGAATCTGGTGATGGGGTGGGGCCGTGGCACTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
CDS-3UTR CCA 90 bp CTGACGCGGGCAGGGCTGATGAACAACCCAGCCATTGTGCTTGACTTGCCGAGGCACACTCTTGCCACTTaGCAGGACAGGCTCCATGAC +
Preference number: 4 (lower is better)
Translates to: LTRAGLMNNPAIVLDLPRHTLAT*QDRLHD
Trigger: GTCATGGAGCCTGTCCTGCCAAGTGGCAAGAGTGTG...CCTCGGCAAGTCAAGCACAATGGCTGGGTTGTTCATCAGCCCTGCCCGCGTCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448464.6
CDS-3UTR GCA 90 bp AAGTGCCACGGCCCCACCCCATCACCAGATTCAGTAGAAAGGCCCTTGGAATTTCTGTGGCAGAGAAAGTaGCACGGCCCCACCCCATCA +
Preference number: 4 (lower is better)
Translates to: KCHGPTPSPDSVERPLEFLWQRK*HGPTPS
Trigger: TGATGGGGTGGGGCCGTGGCACTTTCTCTGCCACAG...AAATTCCAAGGGCCTTTCTACTGAATCTGGTGATGGGGTGGGGCCGTGGCACTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
CDS-3UTR GCA 90 bp GTAGAAAGGCCCTTGGAATTTCCTACAAGGTTCAGTTCTGAACAGCTCCACTTCGGGGCCGGGCTGCGCTaGACCTCGTTCAGGTACCCA +
Preference number: 4 (lower is better)
Translates to: VERPLEFPTRFSSEQLHFGAGLR*TSFRYP
Trigger: TGGGTACCTGAACGAGGTGCAGCGCAGCCCGGCCCC...GAAGTGGAGCTGTTCAGAACTGAACCTTGTAGGAAATTCCAAGGGCCTTTCTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
CDS-3UTR GCA 90 bp AGGGGGAATCTAACTCTTGTTCTAAAGAGACATTCTGGCACTTCATCACAGCCAGCGGTGGGGCCGGGCTaGGCTGCACCTCGTTCAGGT +
Preference number: 4 (lower is better)
Translates to: RGNLTLVLKRHSGTSSQPAVGPG*AAPRSG
Trigger: ACCTGAACGAGGTGCAGCGCAGCCCGGCCCCACCGC...TGGCTGTGATGAAGTGCCAGAATGTCTCTTTAGAACAAGAGTTAGATTCCCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
3UTR CAA 72 bp GCAGGGCTGATGAACAACCCAGCCATTGTGCTTGACTaGCCGAGGGTGGCAATCCCTGGTAAGATTTTGGCG +
Preference number: 4 (lower is better)
Translates to: AGLMNNPAIVLD*PRVAIPGKILA
Trigger: CGCCAAAATCTTACCAGGGATTGCCACCCTCGGCAAGTCAAGCACAATGGCTGGGTTGTTCATCAGCCCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448464.6
CDS-3UTR TCA 90 bp CTGACGCGGGCAGGGCTGATGAACAACCCAGCCATTGTGCTTGACTTGCCGAGGTTCACTCAGATGCCATaGAAGACATCATCACCAGAC +
Preference number: 4 (lower is better)
Translates to: LTRAGLMNNPAIVLDLPRFTQMP*KTSSPD
Trigger: GTCTGGTGATGATGTCTTTCATGGCATCTGAGTGAA...CCTCGGCAAGTCAAGCACAATGGCTGGGTTGTTCATCAGCCCTGCCCGCGTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448464.6
CDS-3UTR TCA 90 bp CTGACGCGGGCAGGGCTGATGAACAACCCAGCCATTGTGCTTGACTTGCCGAGGATCTCACTACACATTTaGCGTCTTCCACTCCAAACG +
Preference number: 4 (lower is better)
Translates to: LTRAGLMNNPAIVLDLPRISLHI*RLPLQT
Trigger: CGTTTGGAGTGGAAGACGTCAAATGTGTAGTGAGAT...CCTCGGCAAGTCAAGCACAATGGCTGGGTTGTTCATCAGCCCTGCCCGCGTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448464.6
CDS-3UTR TCA 90 bp TTGCCACAGAAGATAAATAATGGATGGCTAATTTTCACCTTACAGTGCAGTACAGCGGGGCGGGACTGCTaGGGTAGCTGCGGTGGGGCC +
Preference number: 4 (lower is better)
Translates to: LPQKINNGWLIFTLQCSTAGRDC*GSCGGA
Trigger: GGCCCCACCGCAGCTACCTCAGCAGTCCCGCCCCGC...TGTACTGCACTGTAAGGTGAAAATTAGCCATCCATTATTTATCTTCTGTGGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
CDS-3UTR TCA 90 bp GCTGTGGCAGAGAAAGTGCCACGGCCCCACCCCATCACCAGATTCAGTAGAAAGTGCGGAAAAAGGAAGTaGCTGGCTAGAGGTAAGGAA +
Preference number: 4 (lower is better)
Translates to: AVAEKVPRPHPITRFSRKCGKRK*LARGKE
Trigger: TTCCTTACCTCTAGCCAGTCACTTCCTTTTTCCGCA...CTTTCTACTGAATCTGGTGATGGGGTGGGGCCGTGGCACTTTCTCTGCCACAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
CDS-3UTR GCA 90 bp CTTGCCACTTGGCAGGACAGGCTCCATGACAGAGGATTTTTCACTCTGTGGAAATCCCCCAGGGTTCCCTaGATCAAGCCACTACAGGGT +
Preference number: 4 (lower is better)
Translates to: LATWQDRLHDRGFFTLWKSPRVP*IKPLQG
Trigger: ACCCTGTAGTGGCTTGATGCAGGGAACCCTGGGGGA...TTTCCACAGAGTGAAAAATCCTCTGTCATGGAGCCTGTCCTGCCAAGTGGCAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
CDS-3UTR CCA 90 bp AAGAAGGCACATGTACAGTCTACAATACTCTTCAGTCTCCCTAACTCATGCCCTAAGAGTCATTGTACGTaGGCCCGGGCCGTGCGGGGC +
Preference number: 4 (lower is better)
Translates to: KKAHVQSTILFSLPNSCPKSHCT*ARAVRG
Trigger: GCCCCGCACGGCCCGGGCCCACGTACAATGACTCTT...AGGGCATGAGTTAGGGAGACTGAAGAGTATTGTAGACTGTACATGTGCCTTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
CDS-3UTR CCA 90 bp GCTGTGGCAGAGAAAGTGCCACGGCCCCACCCCATCACCAGATTCAGTAGAAAGAACCTTGTCTTTAGTTaGCCCAATGGTACCGACAGG +
Preference number: 4 (lower is better)
Translates to: AVAEKVPRPHPITRFSRKNLVFS*PNGTDR
Trigger: CCTGTCGGTACCATTGGGCCAACTAAAGACAAGGTT...CTTTCTACTGAATCTGGTGATGGGGTGGGGCCGTGGCACTTTCTCTGCCACAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
3UTR CAA 72 bp CATGAAAGACATCATCACCAGACAGTCCCCACACTCTaGCCACTTGGCAGGACAGGCTCCATGACAGAGGAT +
Preference number: 4 (lower is better)
Translates to: HERHHHQTVPTL*PLGRTGSMTED
Trigger: ATCCTCTGTCATGGAGCCTGTCCTGCCAAGTGGCAAGAGTGTGGGGACTGTCTGGTGATGATGTCTTTCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
CDS-3UTR TCA 90 bp CTAGTCAGAAAAGAGCACAGCTCTTCGCTGAAAGTCCCCCAGGGTTCCCTGCATGGGCAGAGAGAAATATaGAGTCACTTGAGTGCCTGG +
Preference number: 4 (lower is better)
Translates to: LVRKEHSSSLKVPQGSLHGQREI*SHLSAW
Trigger: CCAGGCACTCAAGTGACTTCATATTTCTCTCTGCCC...ATGCAGGGAACCCTGGGGGACTTTCAGCGAAGAGCTGTGCTCTTTTCTGACTAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
CDS-3UTR TCA 90 bp GCTGTGGCAGAGAAAGTGCCACGGCCCCACCCCATCACCAGATTCAGTAGAAAGATAGAATCCTCACAGTaGCTCTGTGAGGGAGGTAAA +
Preference number: 4 (lower is better)
Translates to: AVAEKVPRPHPITRFSRKIESSQ*LCEGGK
Trigger: TTTACCTCCCTCACAGAGTCACTGTGAGGATTCTAT...CTTTCTACTGAATCTGGTGATGGGGTGGGGCCGTGGCACTTTCTCTGCCACAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
CDS-3UTR CCA 90 bp CTGACGCGGGCAGGGCTGATGAACAACCCAGCCATTGTGCTTGACTTGCCGAGGTCTAATATATCAGCATaGCTGATGGCAGTGAAACCA +
Preference number: 4 (lower is better)
Translates to: LTRAGLMNNPAIVLDLPRSNISA*LMAVKP
Trigger: TGGTTTCACTGCCATCAGCCATGCTGATATATTAGA...CCTCGGCAAGTCAAGCACAATGGCTGGGTTGTTCATCAGCCCTGCCCGCGTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448464.6
CDS-3UTR TCA 90 bp CTTGCCACTTGGCAGGACAGGCTCCATGACAGAGGATTTTTCACTCTGTGGAAAAGGGTGCTCAGTAGGTaGCTCTTCACTGATGTCCTC +
Preference number: 4 (lower is better)
Translates to: LATWQDRLHDRGFFTLWKRVLSR*LFTDVL
Trigger: GAGGACATCAGTGAAGAGTCACCTACTGAGCACCCT...TTTCCACAGAGTGAAAAATCCTCTGTCATGGAGCCTGTCCTGCCAAGTGGCAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
CDS-3UTR TCA 90 bp GTACCACGTCATGCAGTCACATTGGAATTACTGCATGCACTCTTCACTAAAGCTAGCACAGCTCTTCGCTaGAAGTCCCCCAGGGTTCCC +
Preference number: 4 (lower is better)
Translates to: VPRHAVTLELLHALFTKASTALR*KSPRVP
Trigger: GGGAACCCTGGGGGACTTTCAGCGAAGAGCTGTGCT...AGCTTTAGTGAAGAGTGCATGCAGTAATTCCAATGTGACTGCATGACGTGGTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
CDS-3UTR GCA 90 bp ACAAGTGCCTCTGTCTACAACACCTGTAATGTCTGTACCACGTCATGCAGTCACCCATTGTGCTTGACTTaGCGAGGGTGGCAATCCCTG +
Preference number: 4 (lower is better)
Translates to: TSASVYNTCNVCTTSCSHPLCLT*RGWQSL
Trigger: CAGGGATTGCCACCCTCGGCAAGTCAAGCACAATGG...GTGACTGCATGACGTGGTACAGACATTACAGGTGTTGTAGACAGAGGCACTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
CDS-3UTR GCA 90 bp GCTGTGGCAGAGAAAGTGCCACGGCCCCACCCCATCACCAGATTCAGTAGAAAGTTCTTAAAAGCTCCCTaGGATAGGAAGTCGAAAACC +
Preference number: 4 (lower is better)
Translates to: AVAEKVPRPHPITRFSRKFLKAP*DRKSKT
Trigger: GGTTTTCGACTTCCTATCGCAGGGAGCTTTTAAGAA...CTTTCTACTGAATCTGGTGATGGGGTGGGGCCGTGGCACTTTCTCTGCCACAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
CDS-3UTR GCA 90 bp GCTGTGGCAGAGAAAGTGCCACGGCCCCACCCCATCACCAGATTCAGTAGAAAGATTGTCCACTTAAGCTaGCTGCCTTTCAAGAGTAAC +
Preference number: 4 (lower is better)
Translates to: AVAEKVPRPHPITRFSRKIVHLS*LPFKSN
Trigger: GTTACTCTTGAAAGGCAGGCAGCTTAAGTGGACAAT...CTTTCTACTGAATCTGGTGATGGGGTGGGGCCGTGGCACTTTCTCTGCCACAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
CDS-3UTR GCA 90 bp AAGTGCCACGGCCCCACCCCATCACCAGATTCAGTAGAAAGGCCCTTGGAATTTAGTCTCCCTAACTCATaGCCTGCCCCTATAAAGGAA +
Preference number: 4 (lower is better)
Translates to: KCHGPTPSPDSVERPLEFSLPNS*PAPIKE
Trigger: TTCCTTTATAGGGGCAGGGCATGAGTTAGGGAGACT...AAATTCCAAGGGCCTTTCTACTGAATCTGGTGATGGGGTGGGGCCGTGGCACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
CDS-3UTR CCA 90 bp TACAAACATATACTACTAGTGTCTCCCAGTACAAGGAGCAGTCTCTTGACTCAAAAGAGTCATTGTACGTaGGCCCGGGCCGTGCGGGGC +
Preference number: 4 (lower is better)
Translates to: YKHILLVSPSTRSSLLTQKSHCT*ARAVRG
Trigger: GCCCCGCACGGCCCGGGCCCACGTACAATGACTCTT...TTGAGTCAAGAGACTGCTCCTTGTACTGGGAGACACTAGTAGTATATGTTTGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
CDS-3UTR CCA 90 bp AAGTGCCACGGCCCCACCCCATCACCAGATTCAGTAGAAAGGCCCTTGGAATTTTTGACTTGCCGAGGGTaGCAATCCCTGGTAAGATTT +
Preference number: 4 (lower is better)
Translates to: KCHGPTPSPDSVERPLEFLTCRG*QSLVRF
Trigger: AAATCTTACCAGGGATTGCCACCCTCGGCAAGTCAA...AAATTCCAAGGGCCTTTCTACTGAATCTGGTGATGGGGTGGGGCCGTGGCACTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
CDS-3UTR CCA 90 bp CTTGACTTGCCGAGGGTGGCAATCCCTGGTAAGATTTTGGCGACGAAGGCTATTAGCTTTTCCTGGCCCTaGGACTACTTGGGCTATGTA +
Preference number: 4 (lower is better)
Translates to: LDLPRVAIPGKILATKAISFSWP*DYLGYV
Trigger: TACATAGCCCAAGTAGTCCCAGGGCCAGGAAAAGCT...AATAGCCTTCGTCGCCAAAATCTTACCAGGGATTGCCACCCTCGGCAAGTCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448464.6
3UTR CAA 72 bp GGCCCCACCCCATCACCAGATTCAGTAGAAAGGCCCTaGGAATTTCCTACAAGGTTCAGTTCTGAACAGCTC +
Preference number: 4 (lower is better)
Translates to: GPTPSPDSVERP*EFPTRFSSEQL
Trigger: GAGCTGTTCAGAACTGAACCTTGTAGGAAATTCCAAGGGCCTTTCTACTGAATCTGGTGATGGGGTGGGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
CDS-3UTR TCA 90 bp CTAGTCAGAAAAGAGCACAGCTCTTCGCTGAAAGTCCCCCAGGGTTCCCTGCATTCCAGAAAAGTTGTATaGGCAGCAAGAGCTGCAACA +
Preference number: 4 (lower is better)
Translates to: LVRKEHSSSLKVPQGSLHSRKVV*AARAAT
Trigger: TGTTGCAGCTCTTGCTGCTCATACAACTTTTCTGGA...ATGCAGGGAACCCTGGGGGACTTTCAGCGAAGAGCTGTGCTCTTTTCTGACTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
CDS-3UTR CCA 90 bp AAGTGCCACGGCCCCACCCCATCACCAGATTCAGTAGAAAGGCCCTTGGAATTTAGGAGTGGACAGAATTaGCGGGAAGGAATAGTAACA +
Preference number: 4 (lower is better)
Translates to: KCHGPTPSPDSVERPLEFRSGQN*REGIVT
Trigger: TGTTACTATTCCTTCCCGCCAATTCTGTCCACTCCT...AAATTCCAAGGGCCTTTCTACTGAATCTGGTGATGGGGTGGGGCCGTGGCACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
3UTR CAA 72 bp CTTGACTTGCCGAGGGTGGCAATCCCTGGTAAGATTTaGGCGACGAAGGCTATTTCTGTTAAGAGGCTGTCT +
Preference number: 4 (lower is better)
Translates to: LDLPRVAIPGKI*ATKAISVKRLS
Trigger: AGACAGCCTCTTAACAGAAATAGCCTTCGTCGCCAAAATCTTACCAGGGATTGCCACCCTCGGCAAGTCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448464.6
CDS-3UTR GCA 90 bp GCTGTGGCAGAGAAAGTGCCACGGCCCCACCCCATCACCAGATTCAGTAGAAAGTTAAAGTGCACAGGGTaGTTATTCAACTTAGGTGAA +
Preference number: 4 (lower is better)
Translates to: AVAEKVPRPHPITRFSRKLKCTG*LFNLGE
Trigger: TTCACCTAAGTTGAATAAGCACCCTGTGCACTTTAA...CTTTCTACTGAATCTGGTGATGGGGTGGGGCCGTGGCACTTTCTCTGCCACAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
CDS-3UTR GCA 90 bp GTACCACGTCATGCAGTCACATTGGAATTACTGCATGCACTCTTCACTAAAGCTACAACCCAGCCATTGTaGTTGACTTGCCGAGGGTGG +
Preference number: 4 (lower is better)
Translates to: VPRHAVTLELLHALFTKATTQPL*LTCRGW
Trigger: CCACCCTCGGCAAGTCAAGCACAATGGCTGGGTTGT...AGCTTTAGTGAAGAGTGCATGCAGTAATTCCAATGTGACTGCATGACGTGGTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
CDS-3UTR GCA 90 bp ACAAGTGCCTCTGTCTACAACACCTGTAATGTCTGTACCACGTCATGCAGTCACTCTGCACGAGACAAGTaGCTCTGTCTACAACACCTG +
Preference number: 4 (lower is better)
Translates to: TSASVYNTCNVCTTSCSHSARDK*LCLQHL
Trigger: CAGGTGTTGTAGACAGAGGCACTTGTCTCGTGCAGA...GTGACTGCATGACGTGGTACAGACATTACAGGTGTTGTAGACAGAGGCACTTGT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
CDS-3UTR GCA 90 bp GCTGTGGCAGAGAAAGTGCCACGGCCCCACCCCATCACCAGATTCAGTAGAAAGCAAATCTGTTCATGTTaGCAAACAAAATCTCATGGC +
Preference number: 4 (lower is better)
Translates to: AVAEKVPRPHPITRFSRKQICSC*QTKSHG
Trigger: GCCATGAGATTTTGTTTGGCAACATGAACAGATTTG...CTTTCTACTGAATCTGGTGATGGGGTGGGGCCGTGGCACTTTCTCTGCCACAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
CDS-3UTR CCA 90 bp CTAGTCAGAAAAGAGCACAGCTCTTCGCTGAAAGTCCCCCAGGGTTCCCTGCATGGACATGACTCAAACTaGAGAAAGCAGGAATCACTT +
Preference number: 4 (lower is better)
Translates to: LVRKEHSSSLKVPQGSLHGHDSN*RKQESL
Trigger: AAGTGATTCCTGCTTTCTCCAGTTTGAGTCATGTCC...ATGCAGGGAACCCTGGGGGACTTTCAGCGAAGAGCTGTGCTCTTTTCTGACTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
CDS-3UTR CCA 90 bp CTAGTCAGAAAAGAGCACAGCTCTTCGCTGAAAGTCCCCCAGGGTTCCCTGCATGTCATGCAGTCACATTaGAATTACTGCATGCACTCT +
Preference number: 4 (lower is better)
Translates to: LVRKEHSSSLKVPQGSLHVMQSH*NYCMHS
Trigger: AGAGTGCATGCAGTAATTCCAATGTGACTGCATGAC...ATGCAGGGAACCCTGGGGGACTTTCAGCGAAGAGCTGTGCTCTTTTCTGACTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
CDS-3UTR CCA 90 bp CTAGTCAGAAAAGAGCACAGCTCTTCGCTGAAAGTCCCCCAGGGTTCCCTGCATTCTAAAGAGACATTCTaGCACTTCATCACAGCCAGT +
Preference number: 4 (lower is better)
Translates to: LVRKEHSSSLKVPQGSLHSKETF*HFITAS
Trigger: ACTGGCTGTGATGAAGTGCCAGAATGTCTCTTTAGA...ATGCAGGGAACCCTGGGGGACTTTCAGCGAAGAGCTGTGCTCTTTTCTGACTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
CDS-3UTR CCA 90 bp ACAAGTGCCTCTGTCTACAACACCTGTAATGTCTGTACCACGTCATGCAGTCACCCCCAGGTACTGGTTTaGTTTTCAGAGGTCCACCTA +
Preference number: 4 (lower is better)
Translates to: TSASVYNTCNVCTTSCSHPQVLV*FSEVHL
Trigger: TAGGTGGACCTCTGAAAACCAAACCAGTACCTGGGG...GTGACTGCATGACGTGGTACAGACATTACAGGTGTTGTAGACAGAGGCACTTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
CDS-3UTR TCA 90 bp ACTCATTTTTGGCAAAGTGCTGTATTGTTCAGTCTGTGTACAAAACTGACCATCAGCACAGCTCTTCGCTaGAAGTCCCCCAGGGTTCCC +
Preference number: 4 (lower is better)
Translates to: THFWQSAVLFSLCTKLTISTALR*KSPRVP
Trigger: GGGAACCCTGGGGGACTTTCAGCGAAGAGCTGTGCT...GATGGTCAGTTTTGTACACAGACTGAACAATACAGCACTTTGCCAAAAATGAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
CDS-3UTR TCA 90 bp ACAAGTGCCTCTGTCTACAACACCTGTAATGTCTGTACCACGTCATGCAGTCACGCAGAAACCACAGTATaGTATTCCAGGTGGTGTGGT +
Preference number: 4 (lower is better)
Translates to: TSASVYNTCNVCTTSCSHAETTV*YSRWCG
Trigger: ACCACACCACCTGGAATATCATACTGTGGTTTCTGC...GTGACTGCATGACGTGGTACAGACATTACAGGTGTTGTAGACAGAGGCACTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
CDS-3UTR GCA 90 bp AGATTTTGGCGACGAAGGCTATTTCTGTTAAGAGGCTGTCTTTCACTGTGTTCTCCATTGTGCTTGACTTaGCGAGGGTGGCAATCCCTG +
Preference number: 4 (lower is better)
Translates to: RFWRRRLFLLRGCLSLCSPLCLT*RGWQSL
Trigger: CAGGGATTGCCACCCTCGGCAAGTCAAGCACAATGG...AGAACACAGTGAAAGACAGCCTCTTAACAGAAATAGCCTTCGTCGCCAAAATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448464.6
CDS-3UTR GCA 90 bp TACAAACATATACTACTAGTGTCTCCCAGTACAAGGAGCAGTCTCTTGACTCAATCCCCCAGGGTTCCCTaGATCAAGCCACTACAGGGT +
Preference number: 4 (lower is better)
Translates to: YKHILLVSPSTRSSLLTQSPRVP*IKPLQG
Trigger: ACCCTGTAGTGGCTTGATGCAGGGAACCCTGGGGGA...TTGAGTCAAGAGACTGCTCCTTGTACTGGGAGACACTAGTAGTATATGTTTGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
CDS-3UTR CCA 90 bp CTTGCCACTTGGCAGGACAGGCTCCATGACAGAGGATTTTTCACTCTGTGGAAAAAGGGCGAAAGCTCTTaGGTTGTTCCAGAAAAGTTG +
Preference number: 4 (lower is better)
Translates to: LATWQDRLHDRGFFTLWKKGESS*VVPEKL
Trigger: CAACTTTTCTGGAACAACCCAAGAGCTTTCGCCCTT...TTTCCACAGAGTGAAAAATCCTCTGTCATGGAGCCTGTCCTGCCAAGTGGCAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
CDS-3UTR CCA 90 bp CTTGCCACTTGGCAGGACAGGCTCCATGACAGAGGATTTTTCACTCTGTGGAAAAGGAGTGGACAGAATTaGCGGGAAGGAATAGTAACA +
Preference number: 4 (lower is better)
Translates to: LATWQDRLHDRGFFTLWKRSGQN*REGIVT
Trigger: TGTTACTATTCCTTCCCGCCAATTCTGTCCACTCCT...TTTCCACAGAGTGAAAAATCCTCTGTCATGGAGCCTGTCCTGCCAAGTGGCAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
CDS-3UTR CCA 90 bp AGGGGGAATCTAACTCTTGTTCTAAAGAGACATTCTGGCACTTCATCACAGCCAATAAGCAGCTTTTCCTaGCCCTGGGACTACTTGGGC +
Preference number: 4 (lower is better)
Translates to: RGNLTLVLKRHSGTSSQPISSFS*PWDYLG
Trigger: GCCCAAGTAGTCCCAGGGCCAGGAAAAGCTGCTTAT...TGGCTGTGATGAAGTGCCAGAATGTCTCTTTAGAACAAGAGTTAGATTCCCCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448464.6
CDS-3UTR TCA 90 bp CTTGACTTGCCGAGGGTGGCAATCCCTGGTAAGATTTTGGCGACGAAGGCTATTAAATATGAAGTCACTTaGGTGCCTGGACAAGTACTT +
Preference number: 4 (lower is better)
Translates to: LDLPRVAIPGKILATKAIKYEVT*VPGQVL
Trigger: AAGTACTTGTCCAGGCACTCAAGTGACTTCATATTT...AATAGCCTTCGTCGCCAAAATCTTACCAGGGATTGCCACCCTCGGCAAGTCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448464.6
CDS-3UTR GCA 90 bp AAGTGCCACGGCCCCACCCCATCACCAGATTCAGTAGAAAGGCCCTTGGAATTTATGAGCAGCAAGAGCTaGAACATAACAATGAATATG +
Preference number: 4 (lower is better)
Translates to: KCHGPTPSPDSVERPLEFMSSKS*NITMNM
Trigger: CATATTCATTGTTATGTTGCAGCTCTTGCTGCTCAT...AAATTCCAAGGGCCTTTCTACTGAATCTGGTGATGGGGTGGGGCCGTGGCACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
CDS-3UTR GCA 90 bp GTACCACGTCATGCAGTCACATTGGAATTACTGCATGCACTCTTCACTAAAGCTTCTGCACGAGACAAGTaGCTCTGTCTACAACACCTG +
Preference number: 4 (lower is better)
Translates to: VPRHAVTLELLHALFTKASARDK*LCLQHL
Trigger: CAGGTGTTGTAGACAGAGGCACTTGTCTCGTGCAGA...AGCTTTAGTGAAGAGTGCATGCAGTAATTCCAATGTGACTGCATGACGTGGTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
CDS-3UTR GCA 90 bp CTAGTCAGAAAAGAGCACAGCTCTTCGCTGAAAGTCCCCCAGGGTTCCCTGCATAAAAGTCACTTGGACTaGAGGGAAGAATACTTACAA +
Preference number: 4 (lower is better)
Translates to: LVRKEHSSSLKVPQGSLHKSHLD*REEYLQ
Trigger: TTGTAAGTATTCTTCCCTGCAGTCCAAGTGACTTTT...ATGCAGGGAACCCTGGGGGACTTTCAGCGAAGAGCTGTGCTCTTTTCTGACTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
CDS-3UTR GCA 90 bp CTAGTCAGAAAAGAGCACAGCTCTTCGCTGAAAGTCCCCCAGGGTTCCCTGCATCAAATCTGTTCATGTTaGCAAACAAAATCTCATGGC +
Preference number: 4 (lower is better)
Translates to: LVRKEHSSSLKVPQGSLHQICSC*QTKSHG
Trigger: GCCATGAGATTTTGTTTGGCAACATGAACAGATTTG...ATGCAGGGAACCCTGGGGGACTTTCAGCGAAGAGCTGTGCTCTTTTCTGACTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
CDS-3UTR CCA 90 bp GTAGAAAGGCCCTTGGAATTTCCTACAAGGTTCAGTTCTGAACAGCTCCACTTCAACCTTGTCTTTAGTTaGCCCAATGGTACCGACAGG +
Preference number: 4 (lower is better)
Translates to: VERPLEFPTRFSSEQLHFNLVFS*PNGTDR
Trigger: CCTGTCGGTACCATTGGGCCAACTAAAGACAAGGTT...GAAGTGGAGCTGTTCAGAACTGAACCTTGTAGGAAATTCCAAGGGCCTTTCTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
CDS-3UTR CCA 90 bp ACAAGTGCCTCTGTCTACAACACCTGTAATGTCTGTACCACGTCATGCAGTCACTGTTCTTTTATCCACTaGGAAGGGCGAAAGCTCTTG +
Preference number: 4 (lower is better)
Translates to: TSASVYNTCNVCTTSCSHCSFIH*EGRKLL
Trigger: CAAGAGCTTTCGCCCTTCCCAGTGGATAAAAGAACA...GTGACTGCATGACGTGGTACAGACATTACAGGTGTTGTAGACAGAGGCACTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
CDS-3UTR CCA 90 bp TACAAACATATACTACTAGTGTCTCCCAGTACAAGGAGCAGTCTCTTGACTCAACACACTCTTGCCACTTaGCAGGACAGGCTCCATGAC +
Preference number: 4 (lower is better)
Translates to: YKHILLVSPSTRSSLLTQHTLAT*QDRLHD
Trigger: GTCATGGAGCCTGTCCTGCCAAGTGGCAAGAGTGTG...TTGAGTCAAGAGACTGCTCCTTGTACTGGGAGACACTAGTAGTATATGTTTGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
CDS-3UTR CCA 90 bp AGGGGGAATCTAACTCTTGTTCTAAAGAGACATTCTGGCACTTCATCACAGCCACCCCAGGTACTGGTTTaGTTTTCAGAGGTCCACCTA +
Preference number: 4 (lower is better)
Translates to: RGNLTLVLKRHSGTSSQPPQVLV*FSEVHL
Trigger: TAGGTGGACCTCTGAAAACCAAACCAGTACCTGGGG...TGGCTGTGATGAAGTGCCAGAATGTCTCTTTAGAACAAGAGTTAGATTCCCCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
CDS-3UTR CCA 90 bp AGGGGGAATCTAACTCTTGTTCTAAAGAGACATTCTGGCACTTCATCACAGCCAAACCTCCCCAGGTACTaGTTTGGTTTTCAGAGGTCC +
Preference number: 4 (lower is better)
Translates to: RGNLTLVLKRHSGTSSQPNLPRY*FGFQRS
Trigger: GGACCTCTGAAAACCAAACCAGTACCTGGGGAGGTT...TGGCTGTGATGAAGTGCCAGAATGTCTCTTTAGAACAAGAGTTAGATTCCCCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
3UTR CAA 72 bp TTCTTTTATCCACTGGGAAGGGCGAAAGCTCTTGGGTaGTTCCAGAAAAGTTGTATGAGCAGCAAGAGCTGC +
Preference number: 4 (lower is better)
Translates to: FFYPLGRAKALG*FQKSCMSSKSC
Trigger: GCAGCTCTTGCTGCTCATACAACTTTTCTGGAACAACCCAAGAGCTTTCGCCCTTCCCAGTGGATAAAAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448464.6
CDS-3UTR TCA 90 bp CTAAGAAACTCATTCACGAAGCACTGCTTGTGTACACCACATATTCCAGACTTTAGGGTGCTCAGTAGGTaGCTCTTCACTGATGTCCTC +
Preference number: 4 (lower is better)
Translates to: LRNSFTKHCLCTPHIPDFRVLSR*LFTDVL
Trigger: GAGGACATCAGTGAAGAGTCACCTACTGAGCACCCT...AAAGTCTGGAATATGTGGTGTACACAAGCAGTGCTTCGTGAATGAGTTTCTTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
CDS-3UTR TCA 90 bp CTTGCCACTTGGCAGGACAGGCTCCATGACAGAGGATTTTTCACTCTGTGGAAAAAATATGAAGTCACTTaGGTGCCTGGACAAGTACTT +
Preference number: 4 (lower is better)
Translates to: LATWQDRLHDRGFFTLWKKYEVT*VPGQVL
Trigger: AAGTACTTGTCCAGGCACTCAAGTGACTTCATATTT...TTTCCACAGAGTGAAAAATCCTCTGTCATGGAGCCTGTCCTGCCAAGTGGCAAG
46% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
CDS-3UTR TCA 90 bp TTTGACGTCTTCCACTCCAAACGCTCTAATCTAGTCAGAAAAGAGCACAGCTCTCATACACTCCAAGCCTaGAACACACATCTAACCTCC +
Preference number: 4 (lower is better)
Translates to: FDVFHSKRSNLVRKEHSSHTLQA*NTHLTS
Trigger: GGAGGTTAGATGTGTGTTTCAGGCTTGGAGTGTATG...AGAGCTGTGCTCTTTTCTGACTAGATTAGAGCGTTTGGAGTGGAAGACGTCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
CDS-3UTR GCA 90 bp GAAAGTCCAGCCATAATTCCATTATATCCATGGCAACTATCACCTGTTAATGCTACAACCCAGCCATTGTaGTTGACTTGCCGAGGGTGG +
Preference number: 4 (lower is better)
Translates to: ESPAIIPLYPWQLSPVNATTQPL*LTCRGW
Trigger: CCACCCTCGGCAAGTCAAGCACAATGGCTGGGTTGT...AGCATTAACAGGTGATAGTTGCCATGGATATAATGGAATTATGGCTGGACTTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
CDS-3UTR GCA 90 bp CTAGTCAGAAAAGAGCACAGCTCTTCGCTGAAAGTCCCCCAGGGTTCCCTGCATAATGAAAATGAAAGATaGCTATTCTCGTACTTGGGA +
Preference number: 4 (lower is better)
Translates to: LVRKEHSSSLKVPQGSLHNENER*LFSYLG
Trigger: TCCCAAGTACGAGAATAGGCATCTTTCATTTTCATT...ATGCAGGGAACCCTGGGGGACTTTCAGCGAAGAGCTGTGCTCTTTTCTGACTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
CDS-3UTR GCA 90 bp AAGTGCCACGGCCCCACCCCATCACCAGATTCAGTAGAAAGGCCCTTGGAATTTAATGAAAATGAAAGATaGCTATTCTCGTACTTGGGA +
Preference number: 4 (lower is better)
Translates to: KCHGPTPSPDSVERPLEFNENER*LFSYLG
Trigger: TCCCAAGTACGAGAATAGGCATCTTTCATTTTCATT...AAATTCCAAGGGCCTTTCTACTGAATCTGGTGATGGGGTGGGGCCGTGGCACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
CDS-3UTR CCA 90 bp TTTGACGTCTTCCACTCCAAACGCTCTAATCTAGTCAGAAAAGAGCACAGCTCTTTGACTTGCCGAGGGTaGCAATCCCTGGTAAGATTT +
Preference number: 4 (lower is better)
Translates to: FDVFHSKRSNLVRKEHSSLTCRG*QSLVRF
Trigger: AAATCTTACCAGGGATTGCCACCCTCGGCAAGTCAA...AGAGCTGTGCTCTTTTCTGACTAGATTAGAGCGTTTGGAGTGGAAGACGTCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
CDS-3UTR CCA 90 bp CTAGTCAGAAAAGAGCACAGCTCTTCGCTGAAAGTCCCCCAGGGTTCCCTGCATGCCTATTCTCGTACTTaGGAAGAAATGTCTTTAAAA +
Preference number: 4 (lower is better)
Translates to: LVRKEHSSSLKVPQGSLHAYSRT*EEMSLK
Trigger: TTTTAAAGACATTTCTTCCCAAGTACGAGAATAGGC...ATGCAGGGAACCCTGGGGGACTTTCAGCGAAGAGCTGTGCTCTTTTCTGACTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
CDS-3UTR CCA 90 bp AGGGGGAATCTAACTCTTGTTCTAAAGAGACATTCTGGCACTTCATCACAGCCAATCAGTCAGAGTGGATaGCTCAGCAAAACCCATCAC +
Preference number: 4 (lower is better)
Translates to: RGNLTLVLKRHSGTSSQPISQSG*LSKTHH
Trigger: GTGATGGGTTTTGCTGAGCCATCCACTCTGACTGAT...TGGCTGTGATGAAGTGCCAGAATGTCTCTTTAGAACAAGAGTTAGATTCCCCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
CDS-3UTR CCA 90 bp GTACCACGTCATGCAGTCACATTGGAATTACTGCATGCACTCTTCACTAAAGCTGGAAATCAGTCAGAGTaGATGGCTCAGCAAAACCCA +
Preference number: 4 (lower is better)
Translates to: VPRHAVTLELLHALFTKAGNQSE*MAQQNP
Trigger: TGGGTTTTGCTGAGCCATCCACTCTGACTGATTTCC...AGCTTTAGTGAAGAGTGCATGCAGTAATTCCAATGTGACTGCATGACGTGGTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
CDS-3UTR CCA 90 bp AGGGGGAATCTAACTCTTGTTCTAAAGAGACATTCTGGCACTTCATCACAGCCAGGAAATCAGTCAGAGTaGATGGCTCAGCAAAACCCA +
Preference number: 4 (lower is better)
Translates to: RGNLTLVLKRHSGTSSQPGNQSE*MAQQNP
Trigger: TGGGTTTTGCTGAGCCATCCACTCTGACTGATTTCC...TGGCTGTGATGAAGTGCCAGAATGTCTCTTTAGAACAAGAGTTAGATTCCCCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
CDS-3UTR CCA 90 bp AAGTGCCACGGCCCCACCCCATCACCAGATTCAGTAGAAAGGCCCTTGGAATTTAAAACTTTACAGACTTaGCCCCTAATTAGACAACAA +
Preference number: 4 (lower is better)
Translates to: KCHGPTPSPDSVERPLEFKTLQT*PLIRQQ
Trigger: TTGTTGTCTAATTAGGGGCCAAGTCTGTAAAGTTTT...AAATTCCAAGGGCCTTTCTACTGAATCTGGTGATGGGGTGGGGCCGTGGCACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
3UTR CAA 72 bp GGGAAGGGCGAAAGCTCTTGGGTTGTTCCAGAAAAGTaGTATGAGCAGCAAGAGCTGCAACATAACAATGAA +
Preference number: 4 (lower is better)
Translates to: GKGESSWVVPEK*YEQQELQHNNE
Trigger: TTCATTGTTATGTTGCAGCTCTTGCTGCTCATACAACTTTTCTGGAACAACCCAAGAGCTTTCGCCCTTCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448464.6
CDS-3UTR TCA 90 bp TTTGACGTCTTCCACTCCAAACGCTCTAATCTAGTCAGAAAAGAGCACAGCTCTTTCCAAATTTATAGCTaGTGCGAGGTGAGGAGTGGA +
Preference number: 4 (lower is better)
Translates to: FDVFHSKRSNLVRKEHSSFQIYS*CEVRSG
Trigger: TCCACTCCTCACCTCGCATCAGCTATAAATTTGGAA...AGAGCTGTGCTCTTTTCTGACTAGATTAGAGCGTTTGGAGTGGAAGACGTCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
CDS-3UTR GCA 90 bp GTAGAAAGGCCCTTGGAATTTCCTACAAGGTTCAGTTCTGAACAGCTCCACTTCATGAAGTCACTTGAGTaGCTGGACAAGTACTTCCAA +
Preference number: 4 (lower is better)
Translates to: VERPLEFPTRFSSEQLHFMKSLE*LDKYFQ
Trigger: TTGGAAGTACTTGTCCAGGCACTCAAGTGACTTCAT...GAAGTGGAGCTGTTCAGAACTGAACCTTGTAGGAAATTCCAAGGGCCTTTCTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
CDS-3UTR GCA 90 bp AAGAAGGCACATGTACAGTCTACAATACTCTTCAGTCTCCCTAACTCATGCCCTGTAACTCTCCTCCCATaGAAAGGATACTGTTGCACA +
Preference number: 4 (lower is better)
Translates to: KKAHVQSTILFSLPNSCPVTLLP*KGYCCT
Trigger: TGTGCAACAGTATCCTTTGCATGGGAGGAGAGTTAC...AGGGCATGAGTTAGGGAGACTGAAGAGTATTGTAGACTGTACATGTGCCTTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
CDS-3UTR GCA 90 bp GTAGAAAGGCCCTTGGAATTTCCTACAAGGTTCAGTTCTGAACAGCTCCACTTCATTGTCCACTTAAGCTaGCTGCCTTTCAAGAGTAAC +
Preference number: 4 (lower is better)
Translates to: VERPLEFPTRFSSEQLHFIVHLS*LPFKSN
Trigger: GTTACTCTTGAAAGGCAGGCAGCTTAAGTGGACAAT...GAAGTGGAGCTGTTCAGAACTGAACCTTGTAGGAAATTCCAAGGGCCTTTCTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
CDS-3UTR CCA 90 bp TTTGACGTCTTCCACTCCAAACGCTCTAATCTAGTCAGAAAAGAGCACAGCTCTTTTGAGCTTCCACTCTaGGACTACTTGGGCTATGTA +
Preference number: 4 (lower is better)
Translates to: FDVFHSKRSNLVRKEHSSFELPL*DYLGYV
Trigger: TACATAGCCCAAGTAGTCCCAGAGTGGAAGCTCAAA...AGAGCTGTGCTCTTTTCTGACTAGATTAGAGCGTTTGGAGTGGAAGACGTCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000342697.5
CDS-3UTR CCA 90 bp GTAGAAAGGCCCTTGGAATTTCCTACAAGGTTCAGTTCTGAACAGCTCCACTTCGTCATGCAGTCACATTaGAATTACTGCATGCACTCT +
Preference number: 4 (lower is better)
Translates to: VERPLEFPTRFSSEQLHFVMQSH*NYCMHS
Trigger: AGAGTGCATGCAGTAATTCCAATGTGACTGCATGAC...GAAGTGGAGCTGTTCAGAACTGAACCTTGTAGGAAATTCCAAGGGCCTTTCTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
CDS-3UTR TCA 90 bp GTACCACGTCATGCAGTCACATTGGAATTACTGCATGCACTCTTCACTAAAGCTTTCTTCTTCTTCTGCTaGGAAACCAGTGCAAGTATC +
Preference number: 4 (lower is better)
Translates to: VPRHAVTLELLHALFTKAFFFFC*ETSASI
Trigger: GATACTTGCACTGGTTTCTCAGCAGAAGAAGAAGAA...AGCTTTAGTGAAGAGTGCATGCAGTAATTCCAATGTGACTGCATGACGTGGTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
CDS-3UTR TCA 90 bp TCACTCTGTGGAAATATAAAGCCTATCTCTTTTCCCATGGGCAGAGAGAAATATGGGCAGAGAGAAATATaGAGTCACTTGAGTGCCTGG +
Preference number: 4 (lower is better)
Translates to: SLCGNIKPISFPMGREKYGQREI*SHLSAW
Trigger: CCAGGCACTCAAGTGACTTCATATTTCTCTCTGCCC...ATATTTCTCTCTGCCCATGGGAAAAGAGATAGGCTTTATATTTCCACAGAGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
CDS-3UTR TCA 90 bp TCACTCTGTGGAAATATAAAGCCTATCTCTTTTCCCATGGGCAGAGAGAAATATGCAGGACAGGCTCCATaGCAGAGGATTTTTCACTCT +
Preference number: 4 (lower is better)
Translates to: SLCGNIKPISFPMGREKYAGQAP*QRIFHS
Trigger: AGAGTGAAAAATCCTCTGTCATGGAGCCTGTCCTGC...ATATTTCTCTCTGCCCATGGGAAAAGAGATAGGCTTTATATTTCCACAGAGTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
CDS-3UTR TCA 90 bp GTACCACGTCATGCAGTCACATTGGAATTACTGCATGCACTCTTCACTAAAGCTACAAAATCTCATGGCTaGACTTCTGTAGCTTGTGAG +
Preference number: 4 (lower is better)
Translates to: VPRHAVTLELLHALFTKATKSHG*TSVACE
Trigger: CTCACAAGCTACAGAAGTTCAGCCATGAGATTTTGT...AGCTTTAGTGAAGAGTGCATGCAGTAATTCCAATGTGACTGCATGACGTGGTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
CDS-3UTR TCA 90 bp AACTCTTGTTCTAAAGAGACATTCTGGCACTTCATCACAGCCAGTAGAAGAACAGCAGAAACCACAGTATaGTATTCCAGGTGGTGTGGT +
Preference number: 4 (lower is better)
Translates to: NSCSKETFWHFITASRRTAETTV*YSRWCG
Trigger: ACCACACCACCTGGAATATCATACTGTGGTTTCTGC...TGTTCTTCTACTGGCTGTGATGAAGTGCCAGAATGTCTCTTTAGAACAAGAGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
CDS-3UTR GCA 90 bp ACAAGTGCCTCTGTCTACAACACCTGTAATGTCTGTACCACGTCATGCAGTCACTCACATTGGAATTACTaGATGCACTCTTCACTAAAG +
Preference number: 4 (lower is better)
Translates to: TSASVYNTCNVCTTSCSHSHWNY*MHSSLK
Trigger: CTTTAGTGAAGAGTGCATGCAGTAATTCCAATGTGA...GTGACTGCATGACGTGGTACAGACATTACAGGTGTTGTAGACAGAGGCACTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
CDS-3UTR GCA 90 bp AGGGGGAATCTAACTCTTGTTCTAAAGAGACATTCTGGCACTTCATCACAGCCAATGAAGTCACTTGAGTaGCTGGACAAGTACTTCCAA +
Preference number: 4 (lower is better)
Translates to: RGNLTLVLKRHSGTSSQPMKSLE*LDKYFQ
Trigger: TTGGAAGTACTTGTCCAGGCACTCAAGTGACTTCAT...TGGCTGTGATGAAGTGCCAGAATGTCTCTTTAGAACAAGAGTTAGATTCCCCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
CDS-3UTR GCA 90 bp TTTGACGTCTTCCACTCCAAACGCTCTAATCTAGTCAGAAAAGAGCACAGCTCTTTCTTAAAAGCTCCCTaGGATAGGAAGTCGAAAACC +
Preference number: 4 (lower is better)
Translates to: FDVFHSKRSNLVRKEHSSFLKAP*DRKSKT
Trigger: GGTTTTCGACTTCCTATCGCAGGGAGCTTTTAAGAA...AGAGCTGTGCTCTTTTCTGACTAGATTAGAGCGTTTGGAGTGGAAGACGTCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
CDS-3UTR GCA 90 bp CTTGCCACTTGGCAGGACAGGCTCCATGACAGAGGATTTTTCACTCTGTGGAAAGAAGATACTCTTCCTTaGTCGTTTTTCTTAAGAGTA +
Preference number: 4 (lower is better)
Translates to: LATWQDRLHDRGFFTLWKEDTLP*SFFLRV
Trigger: TACTCTTAAGAAAAACGAGCAAGGAAGAGTATCTTC...TTTCCACAGAGTGAAAAATCCTCTGTCATGGAGCCTGTCCTGCCAAGTGGCAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
CDS-3UTR CCA 90 bp AACTCTTGTTCTAAAGAGACATTCTGGCACTTCATCACAGCCAGTAGAAGAACAATCAGTCAGAGTGGATaGCTCAGCAAAACCCATCAC +
Preference number: 4 (lower is better)
Translates to: NSCSKETFWHFITASRRTISQSG*LSKTHH
Trigger: GTGATGGGTTTTGCTGAGCCATCCACTCTGACTGAT...TGTTCTTCTACTGGCTGTGATGAAGTGCCAGAATGTCTCTTTAGAACAAGAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
CDS-3UTR CCA 90 bp ACAAGTGCCTCTGTCTACAACACCTGTAATGTCTGTACCACGTCATGCAGTCACTGCTACACTCATTTTTaGCAAAGTGCTGTATTGTTC +
Preference number: 4 (lower is better)
Translates to: TSASVYNTCNVCTTSCSHCYTHF*QSAVLF
Trigger: GAACAATACAGCACTTTGCCAAAAATGAGTGTAGCA...GTGACTGCATGACGTGGTACAGACATTACAGGTGTTGTAGACAGAGGCACTTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
CDS-3UTR TCA 90 bp CTAAGAAACTCATTCACGAAGCACTGCTTGTGTACACCACATATTCCAGACTTTTTGTTAAGGCAAGACTaGGAGTTTGGCTGGATGTCT +
Preference number: 4 (lower is better)
Translates to: LRNSFTKHCLCTPHIPDFLLRQD*EFGWMS
Trigger: AGACATCCAGCCAAACTCTCAGTCTTGCCTTAACAA...AAAGTCTGGAATATGTGGTGTACACAAGCAGTGCTTCGTGAATGAGTTTCTTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
CDS-3UTR TCA 90 bp CTAAGAAACTCATTCACGAAGCACTGCTTGTGTACACCACATATTCCAGACTTTTCCAGAAAAGTTGTATaGGCAGCAAGAGCTGCAACA +
Preference number: 4 (lower is better)
Translates to: LRNSFTKHCLCTPHIPDFSRKVV*AARAAT
Trigger: TGTTGCAGCTCTTGCTGCTCATACAACTTTTCTGGA...AAAGTCTGGAATATGTGGTGTACACAAGCAGTGCTTCGTGAATGAGTTTCTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
CDS-3UTR TCA 90 bp TTGCCACAGAAGATAAATAATGGATGGCTAATTTTCACCTTACAGTGCAGTACAGCAGGACAGGCTCCATaGCAGAGGATTTTTCACTCT +
Preference number: 4 (lower is better)
Translates to: LPQKINNGWLIFTLQCSTAGQAP*QRIFHS
Trigger: AGAGTGAAAAATCCTCTGTCATGGAGCCTGTCCTGC...TGTACTGCACTGTAAGGTGAAAATTAGCCATCCATTATTTATCTTCTGTGGCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
CDS-3UTR TCA 90 bp AACTCTTGTTCTAAAGAGACATTCTGGCACTTCATCACAGCCAGTAGAAGAACATTCACTCAGATGCCATaGAAGACATCATCACCAGAC +
Preference number: 4 (lower is better)
Translates to: NSCSKETFWHFITASRRTFTQMP*KTSSPD
Trigger: GTCTGGTGATGATGTCTTTCATGGCATCTGAGTGAA...TGTTCTTCTACTGGCTGTGATGAAGTGCCAGAATGTCTCTTTAGAACAAGAGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
CDS-3UTR TCA 90 bp TTTGACGTCTTCCACTCCAAACGCTCTAATCTAGTCAGAAAAGAGCACAGCTCTCTTACATGCAATGTATaGAAAAGAGACGCCGTGTAT +
Preference number: 4 (lower is better)
Translates to: FDVFHSKRSNLVRKEHSSLTCNV*KRDAVY
Trigger: ATACACGGCGTCTCTTTTTCATACATTGCATGTAAG...AGAGCTGTGCTCTTTTCTGACTAGATTAGAGCGTTTGGAGTGGAAGACGTCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
CDS-3UTR TCA 90 bp TTTGACGTCTTCCACTCCAAACGCTCTAATCTAGTCAGAAAAGAGCACAGCTCTGTCTGTGTACAAAACTaGCCATCTATGAACCAATCA +
Preference number: 4 (lower is better)
Translates to: FDVFHSKRSNLVRKEHSSVCVQN*PSMNQS
Trigger: TGATTGGTTCATAGATGGTCAGTTTTGTACACAGAC...AGAGCTGTGCTCTTTTCTGACTAGATTAGAGCGTTTGGAGTGGAAGACGTCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
CDS-3UTR TCA 90 bp TTCAGAAGCAGAAACAATGCTGAACAGCCTGCTCAAGTTTTAAATAAACTGTCTTGCCCCATTTCATTTTaGGCTTCCACTTCTGTGCCC +
Preference number: 4 (lower is better)
Translates to: FRSRNNAEQPAQVLNKLSCPISF*ASTSVP
Trigger: GGGCACAGAAGTGGAAGCTCAAAATGAAATGGGGCA...AGACAGTTTATTTAAAACTTGAGCAGGCTGTTCAGCATTGTTTCTGCTTCTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000448464.6
CDS-3UTR CCA 90 bp AGATTTTGGCGACGAAGGCTATTTCTGTTAAGAGGCTGTCTTTCACTGTGTTCTGGACATGACTCAAACTaGAGAAAGCAGGAATCACTT +
Preference number: 4 (lower is better)
Translates to: RFWRRRLFLLRGCLSLCSGHDSN*RKQESL
Trigger: AAGTGATTCCTGCTTTCTCCAGTTTGAGTCATGTCC...AGAACACAGTGAAAGACAGCCTCTTAACAGAAATAGCCTTCGTCGCCAAAATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448464.6
CDS-3UTR CCA 90 bp TACAAACATATACTACTAGTGTCTCCCAGTACAAGGAGCAGTCTCTTGACTCAATCCCTGGTAAGATTTTaGCGACGAAGGCTATTTCTG +
Preference number: 4 (lower is better)
Translates to: YKHILLVSPSTRSSLLTQSLVRF*RRRLFL
Trigger: CAGAAATAGCCTTCGTCGCCAAAATCTTACCAGGGA...TTGAGTCAAGAGACTGCTCCTTGTACTGGGAGACACTAGTAGTATATGTTTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
CDS-3UTR CCA 90 bp GTACCACGTCATGCAGTCACATTGGAATTACTGCATGCACTCTTCACTAAAGCTAGTCACTTGAGTGCCTaGACAAGTACTTCCAAATTT +
Preference number: 4 (lower is better)
Translates to: VPRHAVTLELLHALFTKASHLSA*TSTSKF
Trigger: AAATTTGGAAGTACTTGTCCAGGCACTCAAGTGACT...AGCTTTAGTGAAGAGTGCATGCAGTAATTCCAATGTGACTGCATGACGTGGTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
CDS-3UTR CCA 90 bp ACAAGTGCCTCTGTCTACAACACCTGTAATGTCTGTACCACGTCATGCAGTCACAAAACTTTACAGACTTaGCCCCTAATTAGACAACAA +
Preference number: 4 (lower is better)
Translates to: TSASVYNTCNVCTTSCSHKTLQT*PLIRQQ
Trigger: TTGTTGTCTAATTAGGGGCCAAGTCTGTAAAGTTTT...GTGACTGCATGACGTGGTACAGACATTACAGGTGTTGTAGACAGAGGCACTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
CDS-3UTR CCA 90 bp TTCAGAAGCAGAAACAATGCTGAACAGCCTGCTCAAGTTTTAAATAAACTGTCTAACCTCCCCAGGTACTaGTTTGGTTTTCAGAGGTCC +
Preference number: 4 (lower is better)
Translates to: FRSRNNAEQPAQVLNKLSNLPRY*FGFQRS
Trigger: GGACCTCTGAAAACCAAACCAGTACCTGGGGAGGTT...AGACAGTTTATTTAAAACTTGAGCAGGCTGTTCAGCATTGTTTCTGCTTCTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
CDS-3UTR CCA 90 bp GTACCACGTCATGCAGTCACATTGGAATTACTGCATGCACTCTTCACTAAAGCTACAAAATTTAGACCGTaGCTCAAGAAAACAAGCTGC +
Preference number: 4 (lower is better)
Translates to: VPRHAVTLELLHALFTKATKFRP*LKKTSC
Trigger: GCAGCTTGTTTTCTTGAGCCACGGTCTAAATTTTGT...AGCTTTAGTGAAGAGTGCATGCAGTAATTCCAATGTGACTGCATGACGTGGTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
CDS-3UTR CCA 90 bp AGGGGGAATCTAACTCTTGTTCTAAAGAGACATTCTGGCACTTCATCACAGCCAACAAAATTTAGACCGTaGCTCAAGAAAACAAGCTGC +
Preference number: 4 (lower is better)
Translates to: RGNLTLVLKRHSGTSSQPTKFRP*LKKTSC
Trigger: GCAGCTTGTTTTCTTGAGCCACGGTCTAAATTTTGT...TGGCTGTGATGAAGTGCCAGAATGTCTCTTTAGAACAAGAGTTAGATTCCCCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
CDS-3UTR TCA 90 bp GAAAGTCCAGCCATAATTCCATTATATCCATGGCAACTATCACCTGTTAATGCTTTGTTAAGGCAAGACTaGGAGTTTGGCTGGATGTCT +
Preference number: 4 (lower is better)
Translates to: ESPAIIPLYPWQLSPVNALLRQD*EFGWMS
Trigger: AGACATCCAGCCAAACTCTCAGTCTTGCCTTAACAA...AGCATTAACAGGTGATAGTTGCCATGGATATAATGGAATTATGGCTGGACTTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
CDS-3UTR TCA 90 bp TTTGACGTCTTCCACTCCAAACGCTCTAATCTAGTCAGAAAAGAGCACAGCTCTCAGTGCAAGTATCTATaGAGTCAACAAGAATCCATT +
Preference number: 4 (lower is better)
Translates to: FDVFHSKRSNLVRKEHSSQCKYL*SQQESI
Trigger: AATGGATTCTTGTTGACTTCATAGATACTTGCACTG...AGAGCTGTGCTCTTTTCTGACTAGATTAGAGCGTTTGGAGTGGAAGACGTCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
CDS-3UTR TCA 90 bp GAAAGTCCAGCCATAATTCCATTATATCCATGGCAACTATCACCTGTTAATGCTATCTCACTACACATTTaGCGTCTTCCACTCCAAACG +
Preference number: 4 (lower is better)
Translates to: ESPAIIPLYPWQLSPVNAISLHI*RLPLQT
Trigger: CGTTTGGAGTGGAAGACGTCAAATGTGTAGTGAGAT...AGCATTAACAGGTGATAGTTGCCATGGATATAATGGAATTATGGCTGGACTTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
CDS-3UTR TCA 90 bp AAGAAGGCACATGTACAGTCTACAATACTCTTCAGTCTCCCTAACTCATGCCCTAACTTCTGTAGCTTGTaGGGTACTAACAACTTACAT +
Preference number: 4 (lower is better)
Translates to: KKAHVQSTILFSLPNSCPNFCSL*GTNNLH
Trigger: ATGTAAGTTGTTAGTACCTCACAAGCTACAGAAGTT...AGGGCATGAGTTAGGGAGACTGAAGAGTATTGTAGACTGTACATGTGCCTTCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
CDS-3UTR TCA 90 bp AACTCTTGTTCTAAAGAGACATTCTGGCACTTCATCACAGCCAGTAGAAGAACAACAAAATCTCATGGCTaGACTTCTGTAGCTTGTGAG +
Preference number: 4 (lower is better)
Translates to: NSCSKETFWHFITASRRTTKSHG*TSVACE
Trigger: CTCACAAGCTACAGAAGTTCAGCCATGAGATTTTGT...TGTTCTTCTACTGGCTGTGATGAAGTGCCAGAATGTCTCTTTAGAACAAGAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
CDS-3UTR TCA 90 bp TACAAACATATACTACTAGTGTCTCCCAGTACAAGGAGCAGTCTCTTGACTCAAAAGCAGAAACAATGCTaGACAGCCTGCTCAAGTTTT +
Preference number: 4 (lower is better)
Translates to: YKHILLVSPSTRSSLLTQKQKQC*TACSSF
Trigger: AAAACTTGAGCAGGCTGTTCAGCATTGTTTCTGCTT...TTGAGTCAAGAGACTGCTCCTTGTACTGGGAGACACTAGTAGTATATGTTTGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
CDS-3UTR TCA 90 bp TTGCCACAGAAGATAAATAATGGATGGCTAATTTTCACCTTACAGTGCAGTACACATACACTCCAAGCCTaGAACACACATCTAACCTCC +
Preference number: 4 (lower is better)
Translates to: LPQKINNGWLIFTLQCSTHTLQA*NTHLTS
Trigger: GGAGGTTAGATGTGTGTTTCAGGCTTGGAGTGTATG...TGTACTGCACTGTAAGGTGAAAATTAGCCATCCATTATTTATCTTCTGTGGCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
CDS-3UTR GCA 90 bp AGGGGGAATCTAACTCTTGTTCTAAAGAGACATTCTGGCACTTCATCACAGCCATCACATTGGAATTACTaGATGCACTCTTCACTAAAG +
Preference number: 4 (lower is better)
Translates to: RGNLTLVLKRHSGTSSQPSHWNY*MHSSLK
Trigger: CTTTAGTGAAGAGTGCATGCAGTAATTCCAATGTGA...TGGCTGTGATGAAGTGCCAGAATGTCTCTTTAGAACAAGAGTTAGATTCCCCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
CDS-3UTR GCA 90 bp GAAAGTCCAGCCATAATTCCATTATATCCATGGCAACTATCACCTGTTAATGCTGTAACTCTCCTCCCATaGAAAGGATACTGTTGCACA +
Preference number: 4 (lower is better)
Translates to: ESPAIIPLYPWQLSPVNAVTLLP*KGYCCT
Trigger: TGTGCAACAGTATCCTTTGCATGGGAGGAGAGTTAC...AGCATTAACAGGTGATAGTTGCCATGGATATAATGGAATTATGGCTGGACTTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
CDS-3UTR GCA 90 bp TCGTATAAAACATACACACCTTCATGGAAACTATCTTATCTCCCAACTCTGGTAAGTCTCCCTAACTCATaGCCTGCCCCTATAAAGGAA +
Preference number: 4 (lower is better)
Translates to: SYKTYTPSWKLSYLPTLVSLPNS*PAPIKE
Trigger: TTCCTTTATAGGGGCAGGGCATGAGTTAGGGAGACT...TACCAGAGTTGGGAGATAAGATAGTTTCCATGAAGGTGTGTATGTTTTATACGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
CDS-3UTR CCA 90 bp ACTCATTTTTGGCAAAGTGCTGTATTGTTCAGTCTGTGTACAAAACTGACCATCAAGGGCGAAAGCTCTTaGGTTGTTCCAGAAAAGTTG +
Preference number: 4 (lower is better)
Translates to: THFWQSAVLFSLCTKLTIKGESS*VVPEKL
Trigger: CAACTTTTCTGGAACAACCCAAGAGCTTTCGCCCTT...GATGGTCAGTTTTGTACACAGACTGAACAATACAGCACTTTGCCAAAAATGAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
CDS-3UTR TCA 90 bp TCGTATAAAACATACACACCTTCATGGAAACTATCTTATCTCCCAACTCTGGTATTCCAAATTTATAGCTaGTGCGAGGTGAGGAGTGGA +
Preference number: 4 (lower is better)
Translates to: SYKTYTPSWKLSYLPTLVFQIYS*CEVRSG
Trigger: TCCACTCCTCACCTCGCATCAGCTATAAATTTGGAA...TACCAGAGTTGGGAGATAAGATAGTTTCCATGAAGGTGTGTATGTTTTATACGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
CDS-3UTR TCA 90 bp TCGTATAAAACATACACACCTTCATGGAAACTATCTTATCTCCCAACTCTGGTAATAGAATCCTCACAGTaGCTCTGTGAGGGAGGTAAA +
Preference number: 4 (lower is better)
Translates to: SYKTYTPSWKLSYLPTLVIESSQ*LCEGGK
Trigger: TTTACCTCCCTCACAGAGTCACTGTGAGGATTCTAT...TACCAGAGTTGGGAGATAAGATAGTTTCCATGAAGGTGTGTATGTTTTATACGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
CDS-3UTR TCA 90 bp CGTGTATTCAGAGTTTTACATCCTGAAGACATTAAGCTGGTCTATTTTCAAGTTTGCGGAAAAAGGAAGTaGCTGGCTAGAGGTAAGGAA +
Preference number: 4 (lower is better)
Translates to: RVFRVLHPEDIKLVYFQVCGKRK*LARGKE
Trigger: TTCCTTACCTCTAGCCAGTCACTTCCTTTTTCCGCA...AACTTGAAAATAGACCAGCTTAATGTCTTCAGGATGTAAAACTCTGAATACACG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
CDS-3UTR GCA 90 bp TCACTCTGTGGAAATATAAAGCCTATCTCTTTTCCCATGGGCAGAGAGAAATATCACTCTTCACTCAGATaGCATGAAAGACATCATCAC +
Preference number: 4 (lower is better)
Translates to: SLCGNIKPISFPMGREKYHSSLR*HERHHH
Trigger: GTGATGATGTCTTTCATGGCATCTGAGTGAAGAGTG...ATATTTCTCTCTGCCCATGGGAAAAGAGATAGGCTTTATATTTCCACAGAGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
CDS-3UTR GCA 90 bp CTAAGAAACTCATTCACGAAGCACTGCTTGTGTACACCACATATTCCAGACTTTTCATTCACGAAGCACTaGTTGTGTACACCACATATT +
Preference number: 4 (lower is better)
Translates to: LRNSFTKHCLCTPHIPDFSFTKH*LCTPHI
Trigger: AATATGTGGTGTACACAAGCAGTGCTTCGTGAATGA...AAAGTCTGGAATATGTGGTGTACACAAGCAGTGCTTCGTGAATGAGTTTCTTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
CDS-3UTR GCA 90 bp TTTGACGTCTTCCACTCCAAACGCTCTAATCTAGTCAGAAAAGAGCACAGCTCTATTTTCACCTTACAGTaGAGTACACAATTAGTTGAG +
Preference number: 4 (lower is better)
Translates to: FDVFHSKRSNLVRKEHSSIFTLQ*STQLVE
Trigger: CTCAACTAATTGTGTACTGCACTGTAAGGTGAAAAT...AGAGCTGTGCTCTTTTCTGACTAGATTAGAGCGTTTGGAGTGGAAGACGTCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
CDS-3UTR GCA 90 bp TTTGACGTCTTCCACTCCAAACGCTCTAATCTAGTCAGAAAAGAGCACAGCTCTGAAGATACTCTTCCTTaGTCGTTTTTCTTAAGAGTA +
Preference number: 4 (lower is better)
Translates to: FDVFHSKRSNLVRKEHSSEDTLP*SFFLRV
Trigger: TACTCTTAAGAAAAACGAGCAAGGAAGAGTATCTTC...AGAGCTGTGCTCTTTTCTGACTAGATTAGAGCGTTTGGAGTGGAAGACGTCAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
CDS-3UTR CCA 90 bp TCGTATAAAACATACACACCTTCATGGAAACTATCTTATCTCCCAACTCTGGTATGTTCTTTTATCCACTaGGAAGGGCGAAAGCTCTTG +
Preference number: 4 (lower is better)
Translates to: SYKTYTPSWKLSYLPTLVCSFIH*EGRKLL
Trigger: CAAGAGCTTTCGCCCTTCCCAGTGGATAAAAGAACA...TACCAGAGTTGGGAGATAAGATAGTTTCCATGAAGGTGTGTATGTTTTATACGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
CDS-3UTR CCA 90 bp TTGCCACAGAAGATAAATAATGGATGGCTAATTTTCACCTTACAGTGCAGTACATCCCTGGTAAGATTTTaGCGACGAAGGCTATTTCTG +
Preference number: 4 (lower is better)
Translates to: LPQKINNGWLIFTLQCSTSLVRF*RRRLFL
Trigger: CAGAAATAGCCTTCGTCGCCAAAATCTTACCAGGGA...TGTACTGCACTGTAAGGTGAAAATTAGCCATCCATTATTTATCTTCTGTGGCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
CDS-3UTR CCA 90 bp CTAAGAAACTCATTCACGAAGCACTGCTTGTGTACACCACATATTCCAGACTTTTCTAATATATCAGCATaGCTGATGGCAGTGAAACCA +
Preference number: 4 (lower is better)
Translates to: LRNSFTKHCLCTPHIPDFSNISA*LMAVKP
Trigger: TGGTTTCACTGCCATCAGCCATGCTGATATATTAGA...AAAGTCTGGAATATGTGGTGTACACAAGCAGTGCTTCGTGAATGAGTTTCTTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
3UTR CAA 72 bp TTCAAGAGTAACTCTCCTCCCATGCAAAGGATACTGTaGCACATAAAAGATATCCTCATCTGCATGTTTTCC +
Preference number: 4 (lower is better)
Translates to: FKSNSPPMQRIL*HIKDILICMFS
Trigger: GGAAAACATGCAGATGAGGATATCTTTTATGTGCAACAGTATCCTTTGCATGGGAGGAGAGTTACTCTTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
CDS-3UTR TCA 90 bp TTGCCACAGAAGATAAATAATGGATGGCTAATTTTCACCTTACAGTGCAGTACATTCTTCTTCTTCTGCTaGGAAACCAGTGCAAGTATC +
Preference number: 4 (lower is better)
Translates to: LPQKINNGWLIFTLQCSTFFFFC*ETSASI
Trigger: GATACTTGCACTGGTTTCTCAGCAGAAGAAGAAGAA...TGTACTGCACTGTAAGGTGAAAATTAGCCATCCATTATTTATCTTCTGTGGCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
CDS-3UTR TCA 90 bp TTCAGAAGCAGAAACAATGCTGAACAGCCTGCTCAAGTTTTAAATAAACTGTCTTACAAGGTTCAGTTCTaGACAGCTCCACTTCAAATC +
Preference number: 4 (lower is better)
Translates to: FRSRNNAEQPAQVLNKLSYKVQF*TAPLQI
Trigger: GATTTGAAGTGGAGCTGTTCAGAACTGAACCTTGTA...AGACAGTTTATTTAAAACTTGAGCAGGCTGTTCAGCATTGTTTCTGCTTCTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
CDS-3UTR TCA 90 bp TCACTCTGTGGAAATATAAAGCCTATCTCTTTTCCCATGGGCAGAGAGAAATATGTCTGTGTACAAAACTaGCCATCTATGAACCAATCA +
Preference number: 4 (lower is better)
Translates to: SLCGNIKPISFPMGREKYVCVQN*PSMNQS
Trigger: TGATTGGTTCATAGATGGTCAGTTTTGTACACAGAC...ATATTTCTCTCTGCCCATGGGAAAAGAGATAGGCTTTATATTTCCACAGAGTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
CDS-3UTR CCA 90 bp TCGTATAAAACATACACACCTTCATGGAAACTATCTTATCTCCCAACTCTGGTAGCAAGACTGAGAGTTTaGCTGGATGTCTTTTATAGC +
Preference number: 4 (lower is better)
Translates to: SYKTYTPSWKLSYLPTLVARLRV*LDVFYS
Trigger: GCTATAAAAGACATCCAGCCAAACTCTCAGTCTTGC...TACCAGAGTTGGGAGATAAGATAGTTTCCATGAAGGTGTGTATGTTTTATACGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
CDS-3UTR CCA 90 bp GAAAGTCCAGCCATAATTCCATTATATCCATGGCAACTATCACCTGTTAATGCTAAACAGAGGCCAGAGTaGTTAAAGATTTTGCCTGAA +
Preference number: 4 (lower is better)
Translates to: ESPAIIPLYPWQLSPVNAKQRPE*LKILPE
Trigger: TTCAGGCAAAATCTTTAACCACTCTGGCCTCTGTTT...AGCATTAACAGGTGATAGTTGCCATGGATATAATGGAATTATGGCTGGACTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
CDS-3UTR CCA 90 bp AACTCTTGTTCTAAAGAGACATTCTGGCACTTCATCACAGCCAGTAGAAGAACAACATACACACCTTCATaGAAACTATCTTATCTCCCA +
Preference number: 4 (lower is better)
Translates to: NSCSKETFWHFITASRRTTYTPS*KLSYLP
Trigger: TGGGAGATAAGATAGTTTCCATGAAGGTGTGTATGT...TGTTCTTCTACTGGCTGTGATGAAGTGCCAGAATGTCTCTTTAGAACAAGAGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
CDS-3UTR CCA 90 bp GAAAGTCCAGCCATAATTCCATTATATCCATGGCAACTATCACCTGTTAATGCTCAAGTTACCAATGCATaGCCCTATAACAAACATCGT +
Preference number: 4 (lower is better)
Translates to: ESPAIIPLYPWQLSPVNAQVTNA*PYNKHR
Trigger: ACGATGTTTGTTATAGGGCCATGCATTGGTAACTTG...AGCATTAACAGGTGATAGTTGCCATGGATATAATGGAATTATGGCTGGACTTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
CDS-3UTR TCA 90 bp TTCAGAAGCAGAAACAATGCTGAACAGCCTGCTCAAGTTTTAAATAAACTGTCTCATCTTCTTTCTCATTaGATTCTGGTTCTTGGTTGG +
Preference number: 4 (lower is better)
Translates to: FRSRNNAEQPAQVLNKLSHLLSH*ILVLGW
Trigger: CCAACCAAGAACCAGAATTCAATGAGAAAGAAGATG...AGACAGTTTATTTAAAACTTGAGCAGGCTGTTCAGCATTGTTTCTGCTTCTGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
CDS-3UTR TCA 90 bp GAAAGTCCAGCCATAATTCCATTATATCCATGGCAACTATCACCTGTTAATGCTCAGTGCAAGTATCTATaGAGTCAACAAGAATCCATT +
Preference number: 4 (lower is better)
Translates to: ESPAIIPLYPWQLSPVNAQCKYL*SQQESI
Trigger: AATGGATTCTTGTTGACTTCATAGATACTTGCACTG...AGCATTAACAGGTGATAGTTGCCATGGATATAATGGAATTATGGCTGGACTTTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
CDS-3UTR TCA 90 bp ACTCATTTTTGGCAAAGTGCTGTATTGTTCAGTCTGTGTACAAAACTGACCATCAGGCAAGGCATTATGTaGTACACAGCATATAAATCT +
Preference number: 4 (lower is better)
Translates to: THFWQSAVLFSLCTKLTIRQGIM*YTAYKS
Trigger: AGATTTATATGCTGTGTATCACATAATGCCTTGCCT...GATGGTCAGTTTTGTACACAGACTGAACAATACAGCACTTTGCCAAAAATGAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
CDS-3UTR TCA 90 bp GAAAGTCCAGCCATAATTCCATTATATCCATGGCAACTATCACCTGTTAATGCTAACTTCTGTAGCTTGTaGGGTACTAACAACTTACAT +
Preference number: 4 (lower is better)
Translates to: ESPAIIPLYPWQLSPVNANFCSL*GTNNLH
Trigger: ATGTAAGTTGTTAGTACCTCACAAGCTACAGAAGTT...AGCATTAACAGGTGATAGTTGCCATGGATATAATGGAATTATGGCTGGACTTTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
CDS-3UTR TCA 90 bp CGTGTATTCAGAGTTTTACATCCTGAAGACATTAAGCTGGTCTATTTTCAAGTTAAGCAGAAACAATGCTaGACAGCCTGCTCAAGTTTT +
Preference number: 4 (lower is better)
Translates to: RVFRVLHPEDIKLVYFQVKQKQC*TACSSF
Trigger: AAAACTTGAGCAGGCTGTTCAGCATTGTTTCTGCTT...AACTTGAAAATAGACCAGCTTAATGTCTTCAGGATGTAAAACTCTGAATACACG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
CDS-3UTR GCA 90 bp CGTGTATTCAGAGTTTTACATCCTGAAGACATTAAGCTGGTCTATTTTCAAGTTGTCTGTACCACGTCATaGAGTCACATTGGAATTACT +
Preference number: 4 (lower is better)
Translates to: RVFRVLHPEDIKLVYFQVVCTTS*SHIGIT
Trigger: AGTAATTCCAATGTGACTGCATGACGTGGTACAGAC...AACTTGAAAATAGACCAGCTTAATGTCTTCAGGATGTAAAACTCTGAATACACG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
CDS-3UTR GCA 90 bp TCGTATAAAACATACACACCTTCATGGAAACTATCTTATCTCCCAACTCTGGTATCATTCACGAAGCACTaGTTGTGTACACCACATATT +
Preference number: 4 (lower is better)
Translates to: SYKTYTPSWKLSYLPTLVSFTKH*LCTPHI
Trigger: AATATGTGGTGTACACAAGCAGTGCTTCGTGAATGA...TACCAGAGTTGGGAGATAAGATAGTTTCCATGAAGGTGTGTATGTTTTATACGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
CDS-3UTR CCA 90 bp TCGTATAAAACATACACACCTTCATGGAAACTATCTTATCTCCCAACTCTGGTAAAACAGAGGCCAGAGTaGTTAAAGATTTTGCCTGAA +
Preference number: 4 (lower is better)
Translates to: SYKTYTPSWKLSYLPTLVKQRPE*LKILPE
Trigger: TTCAGGCAAAATCTTTAACCACTCTGGCCTCTGTTT...TACCAGAGTTGGGAGATAAGATAGTTTCCATGAAGGTGTGTATGTTTTATACGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
CDS-3UTR CCA 90 bp CTAACAACTTACATGCAATGTATGAAAAAGAGACGCCGTGTATTCAGAGTTTTATCTAAAGAGACATTCTaGCACTTCATCACAGCCAGT +
Preference number: 4 (lower is better)
Translates to: LTTYMQCMKKRRRVFRVLSKETF*HFITAS
Trigger: ACTGGCTGTGATGAAGTGCCAGAATGTCTCTTTAGA...TAAAACTCTGAATACACGGCGTCTCTTTTTCATACATTGCATGTAAGTTGTTAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
CDS-3UTR GCA 90 bp TTGCCACAGAAGATAAATAATGGATGGCTAATTTTCACCTTACAGTGCAGTACAAAAAGTCACTTGGACTaGAGGGAAGAATACTTACAA +
Preference number: 4 (lower is better)
Translates to: LPQKINNGWLIFTLQCSTKSHLD*REEYLQ
Trigger: TTGTAAGTATTCTTCCCTGCAGTCCAAGTGACTTTT...TGTACTGCACTGTAAGGTGAAAATTAGCCATCCATTATTTATCTTCTGTGGCAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
CDS-3UTR CCA 90 bp GAAAGTCCAGCCATAATTCCATTATATCCATGGCAACTATCACCTGTTAATGCTATTTTATTCAGCCTCTaGAACATTGTTAAGGCAAGA +
Preference number: 4 (lower is better)
Translates to: ESPAIIPLYPWQLSPVNAILFSL*NIVKAR
Trigger: TCTTGCCTTAACAATGTTCCAGAGGCTGAATAAAAT...AGCATTAACAGGTGATAGTTGCCATGGATATAATGGAATTATGGCTGGACTTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
CDS-3UTR CCA 90 bp GAAAGTCCAGCCATAATTCCATTATATCCATGGCAACTATCACCTGTTAATGCTGCCTATTCTCGTACTTaGGAAGAAATGTCTTTAAAA +
Preference number: 4 (lower is better)
Translates to: ESPAIIPLYPWQLSPVNAAYSRT*EEMSLK
Trigger: TTTTAAAGACATTTCTTCCCAAGTACGAGAATAGGC...AGCATTAACAGGTGATAGTTGCCATGGATATAATGGAATTATGGCTGGACTTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
CDS-3UTR TCA 90 bp CTAACAACTTACATGCAATGTATGAAAAAGAGACGCCGTGTATTCAGAGTTTTAAGGCAAGGCATTATGTaGTACACAGCATATAAATCT +
Preference number: 4 (lower is better)
Translates to: LTTYMQCMKKRRRVFRVLRQGIM*YTAYKS
Trigger: AGATTTATATGCTGTGTATCACATAATGCCTTGCCT...TAAAACTCTGAATACACGGCGTCTCTTTTTCATACATTGCATGTAAGTTGTTAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
CDS-3UTR GCA 90 bp CTAACAACTTACATGCAATGTATGAAAAAGAGACGCCGTGTATTCAGAGTTTTAATGAGCAGCAAGAGCTaGAACATAACAATGAATATG +
Preference number: 4 (lower is better)
Translates to: LTTYMQCMKKRRRVFRVLMSSKS*NITMNM
Trigger: CATATTCATTGTTATGTTGCAGCTCTTGCTGCTCAT...TAAAACTCTGAATACACGGCGTCTCTTTTTCATACATTGCATGTAAGTTGTTAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
CDS-3UTR GCA 90 bp TCGTATAAAACATACACACCTTCATGGAAACTATCTTATCTCCCAACTCTGGTAATTTTCACCTTACAGTaGAGTACACAATTAGTTGAG +
Preference number: 4 (lower is better)
Translates to: SYKTYTPSWKLSYLPTLVIFTLQ*STQLVE
Trigger: CTCAACTAATTGTGTACTGCACTGTAAGGTGAAAAT...TACCAGAGTTGGGAGATAAGATAGTTTCCATGAAGGTGTGTATGTTTTATACGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
CDS-3UTR CCA 90 bp TTCAGAAGCAGAAACAATGCTGAACAGCCTGCTCAAGTTTTAAATAAACTGTCTATTTTATTCAGCCTCTaGAACATTGTTAAGGCAAGA +
Preference number: 4 (lower is better)
Translates to: FRSRNNAEQPAQVLNKLSILFSL*NIVKAR
Trigger: TCTTGCCTTAACAATGTTCCAGAGGCTGAATAAAAT...AGACAGTTTATTTAAAACTTGAGCAGGCTGTTCAGCATTGTTTCTGCTTCTGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
CDS-3UTR CCA 90 bp CGTGTATTCAGAGTTTTACATCCTGAAGACATTAAGCTGGTCTATTTTCAAGTTACATACACACCTTCATaGAAACTATCTTATCTCCCA +
Preference number: 4 (lower is better)
Translates to: RVFRVLHPEDIKLVYFQVTYTPS*KLSYLP
Trigger: TGGGAGATAAGATAGTTTCCATGAAGGTGTGTATGT...AACTTGAAAATAGACCAGCTTAATGTCTTCAGGATGTAAAACTCTGAATACACG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
3UTR CAA 72 bp AAACAATGCTACACTCATTTTTGGCAAAGTGCTGTATaGTTCAGTCTGTGTACAAAACTGACCATCTATGAA +
Preference number: 4 (lower is better)
Translates to: KQCYTHFWQSAV*FSLCTKLTIYE
Trigger: TTCATAGATGGTCAGTTTTGTACACAGACTGAACAATACAGCACTTTGCCAAAAATGAGTGTAGCATTGTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
CDS GCA 90 bp GTACCCAGACGGCAGGCGCGGGGCCGGCTCCAGCCCTCGGGTCGCTaGGCCCAGGCCGGCCAGTCCAAGTCCTTTTGTTGTTGTGCAGCG +
Preference number: 5 (lower is better)
Translates to: VPRRQARGRLQPSGR*AQAGQSKSFCCCAA
Trigger: CGCTGCACAACAACAAAAGGACTTGGACTGGCCGGCCTGGGCGCAGCGACCCGAGGGCTGGAGCCGGCCCCGCGCCTGCCGTCTGGGTAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000342697.5
CDS-3UTR CAA 90 bp AAGTGCCACGGCCCCACCCCATCACCAGATTCAGTAGAAAGGCCCTTGGAATTTGCCATTGTGCTTGACTaGCCGAGGGTGGCAATCCCT +
Preference number: 5 (lower is better)
Translates to: KCHGPTPSPDSVERPLEFAIVLD*PRVAIP
Trigger: AGGGATTGCCACCCTCGGCAAGTCAAGCACAATGGC...AAATTCCAAGGGCCTTTCTACTGAATCTGGTGATGGGGTGGGGCCGTGGCACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
CDS-3UTR CAA 90 bp CTTGCCACTTGGCAGGACAGGCTCCATGACAGAGGATTTTTCACTCTGTGGAAAACAGTCCCCACACTCTaGCCACTTGGCAGGACAGGC +
Preference number: 5 (lower is better)
Translates to: LATWQDRLHDRGFFTLWKTVPTL*PLGRTG
Trigger: GCCTGTCCTGCCAAGTGGCAAGAGTGTGGGGACTGT...TTTCCACAGAGTGAAAAATCCTCTGTCATGGAGCCTGTCCTGCCAAGTGGCAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
CDS TCA 90 bp GACTACTTGGGCTATGTAATTCATCAGTCCCACGGGTGGCCTCACTaGGACCAGGGCAGGAGTTATGCACAGCATAGACAGACATGCTGG +
Preference number: 5 (lower is better)
Translates to: DYLGYVIHQSHGWPH*DQGRSYAQHRQTCW
Trigger: CCAGCATGTCTGTCTATGCTGTGCATAACTCCTGCCCTGGTCTCAGTGAGGCCACCCGTGGGACTGATGAATTACATAGCCCAAGTAGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
CDS-3UTR CAA 90 bp GCTGTGGCAGAGAAAGTGCCACGGCCCCACCCCATCACCAGATTCAGTAGAAAGCGTCATGCAGTCACATaGGAATTACTGCATGCACTC +
Preference number: 5 (lower is better)
Translates to: AVAEKVPRPHPITRFSRKRHAVT*ELLHAL
Trigger: GAGTGCATGCAGTAATTCCAATGTGACTGCATGACG...CTTTCTACTGAATCTGGTGATGGGGTGGGGCCGTGGCACTTTCTCTGCCACAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
CDS TCA 90 bp TACCGACAGGAGATTAAAGTGCACAGGGTGCTTATTCAACTTAGGTaGAAAGCAAGAAGAGTCATTGTACGTGGGCCCGGGCCGTGCGGG +
Preference number: 5 (lower is better)
Translates to: YRQEIKVHRVLIQLR*KARRVIVRGPGPCG
Trigger: CCCGCACGGCCCGGGCCCACGTACAATGACTCTTCTTGCTTTTCACCTAAGTTGAATAAGCACCCTGTGCACTTTAATCTCCTGTCGGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
CDS-3UTR CAA 90 bp CTAGTCAGAAAAGAGCACAGCTCTTCGCTGAAAGTCCCCCAGGGTTCCCTGCATCTGCCCCATTTCATTTaGAGCTTCCACTCTGGGACT +
Preference number: 5 (lower is better)
Translates to: LVRKEHSSSLKVPQGSLHLPHFI*SFHSGT
Trigger: AGTCCCAGAGTGGAAGCTCAAAATGAAATGGGGCAG...ATGCAGGGAACCCTGGGGGACTTTCAGCGAAGAGCTGTGCTCTTTTCTGACTAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000342697.5
CDS-3UTR CAA 90 bp CTTGACTTGCCGAGGGTGGCAATCCCTGGTAAGATTTTGGCGACGAAGGCTATTACCAGCTCTCCTCCATaGGACATGACTCAAACTGGA +
Preference number: 5 (lower is better)
Translates to: LDLPRVAIPGKILATKAITSSPP*DMTQTG
Trigger: TCCAGTTTGAGTCATGTCCAATGGAGGAGAGCTGGT...AATAGCCTTCGTCGCCAAAATCTTACCAGGGATTGCCACCCTCGGCAAGTCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448464.6
CDS-3UTR CAA 90 bp CTGACGCGGGCAGGGCTGATGAACAACCCAGCCATTGTGCTTGACTTGCCGAGGCCATTTATGCATAGATaGATGTACAGTAACCTAACC +
Preference number: 5 (lower is better)
Translates to: LTRAGLMNNPAIVLDLPRPFMHR*MYSNLT
Trigger: GGTTAGGTTACTGTACATCAATCTATGCATAAATGG...CCTCGGCAAGTCAAGCACAATGGCTGGGTTGTTCATCAGCCCTGCCCGCGTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448464.6
CDS-3UTR CAA 90 bp CTAGTCAGAAAAGAGCACAGCTCTTCGCTGAAAGTCCCCCAGGGTTCCCTGCATGAAAGCAGGAATCACTaGTATCAGCCAAGCACTCAA +
Preference number: 5 (lower is better)
Translates to: LVRKEHSSSLKVPQGSLHESRNH*YQPSTQ
Trigger: TTGAGTGCTTGGCTGATACAAGTGATTCCTGCTTTC...ATGCAGGGAACCCTGGGGGACTTTCAGCGAAGAGCTGTGCTCTTTTCTGACTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
CDS-3UTR CAA 90 bp AAGTGCCACGGCCCCACCCCATCACCAGATTCAGTAGAAAGGCCCTTGGAATTTGAAAGCAGGAATCACTaGTATCAGCCAAGCACTCAA +
Preference number: 5 (lower is better)
Translates to: KCHGPTPSPDSVERPLEFESRNH*YQPSTQ
Trigger: TTGAGTGCTTGGCTGATACAAGTGATTCCTGCTTTC...AAATTCCAAGGGCCTTTCTACTGAATCTGGTGATGGGGTGGGGCCGTGGCACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
CDS-3UTR CAA 90 bp CTTGCCACTTGGCAGGACAGGCTCCATGACAGAGGATTTTTCACTCTGTGGAAAGAGGAGTGGACAGAATaGGCGGGAAGGAATAGTAAC +
Preference number: 5 (lower is better)
Translates to: LATWQDRLHDRGFFTLWKEEWTE*AGRNSN
Trigger: GTTACTATTCCTTCCCGCCAATTCTGTCCACTCCTC...TTTCCACAGAGTGAAAAATCCTCTGTCATGGAGCCTGTCCTGCCAAGTGGCAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
CDS-3UTR CAA 90 bp AAGTGCCACGGCCCCACCCCATCACCAGATTCAGTAGAAAGGCCCTTGGAATTTCATCTCACTACACATTaGACGTCTTCCACTCCAAAC +
Preference number: 5 (lower is better)
Translates to: KCHGPTPSPDSVERPLEFHLTTH*TSSTPN
Trigger: GTTTGGAGTGGAAGACGTCAAATGTGTAGTGAGATG...AAATTCCAAGGGCCTTTCTACTGAATCTGGTGATGGGGTGGGGCCGTGGCACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
CDS-3UTR CAA 90 bp CTAGTCAGAAAAGAGCACAGCTCTTCGCTGAAAGTCCCCCAGGGTTCCCTGCATAATTCTGGTTCTTGGTaGGAGGAAGAACTGACTTCA +
Preference number: 5 (lower is better)
Translates to: LVRKEHSSSLKVPQGSLHNSGSW*EEELTS
Trigger: TGAAGTCAGTTCTTCCTCCAACCAAGAACCAGAATT...ATGCAGGGAACCCTGGGGGACTTTCAGCGAAGAGCTGTGCTCTTTTCTGACTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
CDS-3UTR CAA 90 bp GCTGTGGCAGAGAAAGTGCCACGGCCCCACCCCATCACCAGATTCAGTAGAAAGGGAAAAACAAGCTGTTaGATTATGAAGGCAACACTT +
Preference number: 5 (lower is better)
Translates to: AVAEKVPRPHPITRFSRKGKTSC*IMKATL
Trigger: AAGTGTTGCCTTCATAATCAAACAGCTTGTTTTTCC...CTTTCTACTGAATCTGGTGATGGGGTGGGGCCGTGGCACTTTCTCTGCCACAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
CDS CCA 90 bp GGTGGGGTGATAAACCAGCTCTCCTCCATTGGACATGACTCAAACTaGAGAAAGCAGGAATCACTTGTATCAGCCAAGCACTCAAGAGAT +
Preference number: 5 (lower is better)
Translates to: GGVINQLSSIGHDSN*RKQESLVSAKHSRD
Trigger: ATCTCTTGAGTGCTTGGCTGATACAAGTGATTCCTGCTTTCTCCAGTTTGAGTCATGTCCAATGGAGGAGAGCTGGTTTATCACCCCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
CDS-3UTR CAA 90 bp TTTGACGTCTTCCACTCCAAACGCTCTAATCTAGTCAGAAAAGAGCACAGCTCTGTCCAAGTCCTTTTGTaGTTGTGCAGCGCTCGCAAC +
Preference number: 5 (lower is better)
Translates to: FDVFHSKRSNLVRKEHSSVQVLL*LCSARN
Trigger: GTTGCGAGCGCTGCACAACAACAAAAGGACTTGGAC...AGAGCTGTGCTCTTTTCTGACTAGATTAGAGCGTTTGGAGTGGAAGACGTCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000342697.5
CDS-3UTR CAA 90 bp CTAGTCAGAAAAGAGCACAGCTCTTCGCTGAAAGTCCCCCAGGGTTCCCTGCATAAAATGAAAAGTCACTaGGACTGCAGGGAAGAATAC +
Preference number: 5 (lower is better)
Translates to: LVRKEHSSSLKVPQGSLHKMKSH*DCREEY
Trigger: GTATTCTTCCCTGCAGTCCAAGTGACTTTTCATTTT...ATGCAGGGAACCCTGGGGGACTTTCAGCGAAGAGCTGTGCTCTTTTCTGACTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
CDS-3UTR CAA 90 bp TTTGACGTCTTCCACTCCAAACGCTCTAATCTAGTCAGAAAAGAGCACAGCTCTTCCCCAGGTACTGGTTaGGTTTTCAGAGGTCCACCT +
Preference number: 5 (lower is better)
Translates to: FDVFHSKRSNLVRKEHSSSPGTG*VFRGPP
Trigger: AGGTGGACCTCTGAAAACCAAACCAGTACCTGGGGA...AGAGCTGTGCTCTTTTCTGACTAGATTAGAGCGTTTGGAGTGGAAGACGTCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
CDS-3UTR CAA 90 bp GTAGAAAGGCCCTTGGAATTTCCTACAAGGTTCAGTTCTGAACAGCTCCACTTCTGGCCCTGGGACTACTaGGGCTATGTAATTCATCAG +
Preference number: 5 (lower is better)
Translates to: VERPLEFPTRFSSEQLHFWPWDY*GYVIHQ
Trigger: CTGATGAATTACATAGCCCAAGTAGTCCCAGGGCCA...GAAGTGGAGCTGTTCAGAACTGAACCTTGTAGGAAATTCCAAGGGCCTTTCTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448464.6
CDS-3UTR CAA 90 bp GAAAGTCCAGCCATAATTCCATTATATCCATGGCAACTATCACCTGTTAATGCTGCCATTGTGCTTGACTaGCCGAGGGTGGCAATCCCT +
Preference number: 5 (lower is better)
Translates to: ESPAIIPLYPWQLSPVNAAIVLD*PRVAIP
Trigger: AGGGATTGCCACCCTCGGCAAGTCAAGCACAATGGC...AGCATTAACAGGTGATAGTTGCCATGGATATAATGGAATTATGGCTGGACTTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
CDS-3UTR CAA 90 bp TTTGACGTCTTCCACTCCAAACGCTCTAATCTAGTCAGAAAAGAGCACAGCTCTGAGGAGTGGACAGAATaGGCGGGAAGGAATAGTAAC +
Preference number: 5 (lower is better)
Translates to: FDVFHSKRSNLVRKEHSSEEWTE*AGRNSN
Trigger: GTTACTATTCCTTCCCGCCAATTCTGTCCACTCCTC...AGAGCTGTGCTCTTTTCTGACTAGATTAGAGCGTTTGGAGTGGAAGACGTCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
CDS-3UTR CAA 90 bp TTGCCACAGAAGATAAATAATGGATGGCTAATTTTCACCTTACAGTGCAGTACAACAGTCCCCACACTCTaGCCACTTGGCAGGACAGGC +
Preference number: 5 (lower is better)
Translates to: LPQKINNGWLIFTLQCSTTVPTL*PLGRTG
Trigger: GCCTGTCCTGCCAAGTGGCAAGAGTGTGGGGACTGT...TGTACTGCACTGTAAGGTGAAAATTAGCCATCCATTATTTATCTTCTGTGGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
CDS-3UTR CAA 90 bp GTAGAAAGGCCCTTGGAATTTCCTACAAGGTTCAGTTCTGAACAGCTCCACTTCGTTGTTCCAGAAAAGTaGTATGAGCAGCAAGAGCTG +
Preference number: 5 (lower is better)
Translates to: VERPLEFPTRFSSEQLHFVVPEK*YEQQEL
Trigger: CAGCTCTTGCTGCTCATACAACTTTTCTGGAACAAC...GAAGTGGAGCTGTTCAGAACTGAACCTTGTAGGAAATTCCAAGGGCCTTTCTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
CDS-3UTR CAA 90 bp AAGAAGGCACATGTACAGTCTACAATACTCTTCAGTCTCCCTAACTCATGCCCTGAAGGGCGAAAGCTCTaGGGTTGTTCCAGAAAAGTT +
Preference number: 5 (lower is better)
Translates to: KKAHVQSTILFSLPNSCPEGRKL*GCSRKV
Trigger: AACTTTTCTGGAACAACCCAAGAGCTTTCGCCCTTC...AGGGCATGAGTTAGGGAGACTGAAGAGTATTGTAGACTGTACATGTGCCTTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
CDS-3UTR CAA 90 bp TCGTATAAAACATACACACCTTCATGGAAACTATCTTATCTCCCAACTCTGGTAACCCAGCCATTGTGCTaGACTTGCCGAGGGTGGCAA +
Preference number: 5 (lower is better)
Translates to: SYKTYTPSWKLSYLPTLVTQPLC*TCRGWQ
Trigger: TTGCCACCCTCGGCAAGTCAAGCACAATGGCTGGGT...TACCAGAGTTGGGAGATAAGATAGTTTCCATGAAGGTGTGTATGTTTTATACGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
CDS-3UTR CAA 90 bp CTTGACTTGCCGAGGGTGGCAATCCCTGGTAAGATTTTGGCGACGAAGGCTATTCAGTTTGCATGGGGATaGGAAAAATGTATAGGAAAT +
Preference number: 5 (lower is better)
Translates to: LDLPRVAIPGKILATKAIQFAWG*EKCIGN
Trigger: ATTTCCTATACATTTTTCCAATCCCCATGCAAACTG...AATAGCCTTCGTCGCCAAAATCTTACCAGGGATTGCCACCCTCGGCAAGTCAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000448464.6
CDS-3UTR CAA 90 bp CTAACAACTTACATGCAATGTATGAAAAAGAGACGCCGTGTATTCAGAGTTTTAACCCAGCCATTGTGCTaGACTTGCCGAGGGTGGCAA +
Preference number: 5 (lower is better)
Translates to: LTTYMQCMKKRRRVFRVLTQPLC*TCRGWQ
Trigger: TTGCCACCCTCGGCAAGTCAAGCACAATGGCTGGGT...TAAAACTCTGAATACACGGCGTCTCTTTTTCATACATTGCATGTAAGTTGTTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
CDS-3UTR CAA 90 bp AAGAAGGCACATGTACAGTCTACAATACTCTTCAGTCTCCCTAACTCATGCCCTTCAGTAGAAAGGCCCTaGGAATTTCCTACAAGGTTC +
Preference number: 5 (lower is better)
Translates to: KKAHVQSTILFSLPNSCPSVERP*EFPTRF
Trigger: GAACCTTGTAGGAAATTCCAAGGGCCTTTCTACTGA...AGGGCATGAGTTAGGGAGACTGAAGAGTATTGTAGACTGTACATGTGCCTTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
CDS-3UTR CAA 90 bp AGGGGGAATCTAACTCTTGTTCTAAAGAGACATTCTGGCACTTCATCACAGCCATTCACGAAGCACTGCTaGTGTACACCACATATTCCA +
Preference number: 5 (lower is better)
Translates to: RGNLTLVLKRHSGTSSQPFTKHC*CTPHIP
Trigger: TGGAATATGTGGTGTACACAAGCAGTGCTTCGTGAA...TGGCTGTGATGAAGTGCCAGAATGTCTCTTTAGAACAAGAGTTAGATTCCCCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
CDS-3UTR CAA 90 bp CTTGCCACTTGGCAGGACAGGCTCCATGACAGAGGATTTTTCACTCTGTGGAAAATGCAAAGGATACTGTaGCACATAAAAGATATCCTC +
Preference number: 5 (lower is better)
Translates to: LATWQDRLHDRGFFTLWKMQRIL*HIKDIL
Trigger: GAGGATATCTTTTATGTGCAACAGTATCCTTTGCAT...TTTCCACAGAGTGAAAAATCCTCTGTCATGGAGCCTGTCCTGCCAAGTGGCAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
CDS-3UTR CAA 90 bp ACAAGTGCCTCTGTCTACAACACCTGTAATGTCTGTACCACGTCATGCAGTCACTGGCAAAGTGCTGTATaGTTCAGTCTGTGTACAAAA +
Preference number: 5 (lower is better)
Translates to: TSASVYNTCNVCTTSCSHWQSAV*FSLCTK
Trigger: TTTTGTACACAGACTGAACAATACAGCACTTTGCCA...GTGACTGCATGACGTGGTACAGACATTACAGGTGTTGTAGACAGAGGCACTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
CDS-3UTR CAA 90 bp TACAAACATATACTACTAGTGTCTCCCAGTACAAGGAGCAGTCTCTTGACTCAACTGCCCCATTTCATTTaGAGCTTCCACTTCTGTGCC +
Preference number: 5 (lower is better)
Translates to: YKHILLVSPSTRSSLLTQLPHFI*SFHFCA
Trigger: GGCACAGAAGTGGAAGCTCAAAATGAAATGGGGCAG...TTGAGTCAAGAGACTGCTCCTTGTACTGGGAGACACTAGTAGTATATGTTTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448464.6
CDS GCA 90 bp TTTAGTTGGCCCAATGGTACCGACAGGAGATTAAAGTGCACAGGGTaGTTATTCAACTTAGGTGAAAAGCAAGAAGAGTCATTGTACGTG +
Preference number: 5 (lower is better)
Translates to: FSWPNGTDRRLKCTG*LFNLGEKQEESLYV
Trigger: CACGTACAATGACTCTTCTTGCTTTTCACCTAAGTTGAATAAGCACCCTGTGCACTTTAATCTCCTGTCGGTACCATTGGGCCAACTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
CDS GCA 90 bp AACCTTGTCTTTAGTTGGCCCAATGGTACCGACAGGAGATTAAAGTaGACAGGGTGCTTATTCAACTTAGGTGAAAAGCAAGAAGAGTCA +
Preference number: 5 (lower is better)
Translates to: NLVFSWPNGTDRRLK*TGCLFNLGEKQEES
Trigger: TGACTCTTCTTGCTTTTCACCTAAGTTGAATAAGCACCCTGTGCACTTTAATCTCCTGTCGGTACCATTGGGCCAACTAAAGACAAGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
CDS-3UTR CAA 90 bp CTAACAACTTACATGCAATGTATGAAAAAGAGACGCCGTGTATTCAGAGTTTTACCAGTCCAAGTCCTTTaGTTGTTGTGCAGCGCTCGC +
Preference number: 5 (lower is better)
Translates to: LTTYMQCMKKRRRVFRVLPVQVL*LLCSAR
Trigger: GCGAGCGCTGCACAACAACAAAAGGACTTGGACTGG...TAAAACTCTGAATACACGGCGTCTCTTTTTCATACATTGCATGTAAGTTGTTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000342697.5
CDS-3UTR CAA 90 bp AACTCTTGTTCTAAAGAGACATTCTGGCACTTCATCACAGCCAGTAGAAGAACACGTCATGCAGTCACATaGGAATTACTGCATGCACTC +
Preference number: 5 (lower is better)
Translates to: NSCSKETFWHFITASRRTRHAVT*ELLHAL
Trigger: GAGTGCATGCAGTAATTCCAATGTGACTGCATGACG...TGTTCTTCTACTGGCTGTGATGAAGTGCCAGAATGTCTCTTTAGAACAAGAGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
CDS-3UTR CAA 90 bp AGATTTTGGCGACGAAGGCTATTTCTGTTAAGAGGCTGTCTTTCACTGTGTTCTTTCACGAAGCACTGCTaGTGTACACCACATATTCCA +
Preference number: 5 (lower is better)
Translates to: RFWRRRLFLLRGCLSLCSFTKHC*CTPHIP
Trigger: TGGAATATGTGGTGTACACAAGCAGTGCTTCGTGAA...AGAACACAGTGAAAGACAGCCTCTTAACAGAAATAGCCTTCGTCGCCAAAATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448464.6
CDS-3UTR CAA 90 bp TCGTATAAAACATACACACCTTCATGGAAACTATCTTATCTCCCAACTCTGGTATCCCCAGGTACTGGTTaGGTTTTCAGAGGTCCACCT +
Preference number: 5 (lower is better)
Translates to: SYKTYTPSWKLSYLPTLVSPGTG*VFRGPP
Trigger: AGGTGGACCTCTGAAAACCAAACCAGTACCTGGGGA...TACCAGAGTTGGGAGATAAGATAGTTTCCATGAAGGTGTGTATGTTTTATACGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
CDS-3UTR CAA 90 bp TTCAGAAGCAGAAACAATGCTGAACAGCCTGCTCAAGTTTTAAATAAACTGTCTACCAGCTCTCCTCCATaGGACATGACTCAAACTGGA +
Preference number: 5 (lower is better)
Translates to: FRSRNNAEQPAQVLNKLSTSSPP*DMTQTG
Trigger: TCCAGTTTGAGTCATGTCCAATGGAGGAGAGCTGGT...AGACAGTTTATTTAAAACTTGAGCAGGCTGTTCAGCATTGTTTCTGCTTCTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
CDS-3UTR CAA 90 bp AACTCTTGTTCTAAAGAGACATTCTGGCACTTCATCACAGCCAGTAGAAGAACAGGACTTGTTTCCACCTaGATAGTGGTTAATCCACCT +
Preference number: 5 (lower is better)
Translates to: NSCSKETFWHFITASRRTGLVST*IVVNPP
Trigger: AGGTGGATTAACCACTATCAAGGTGGAAACAAGTCC...TGTTCTTCTACTGGCTGTGATGAAGTGCCAGAATGTCTCTTTAGAACAAGAGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
CDS-3UTR CAA 90 bp ACTCATTTTTGGCAAAGTGCTGTATTGTTCAGTCTGTGTACAAAACTGACCATCCCACTCTGGGACTACTaGGGCTATGTAATTCATCAG +
Preference number: 5 (lower is better)
Translates to: THFWQSAVLFSLCTKLTIPLWDY*GYVIHQ
Trigger: CTGATGAATTACATAGCCCAAGTAGTCCCAGAGTGG...GATGGTCAGTTTTGTACACAGACTGAACAATACAGCACTTTGCCAAAAATGAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000342697.5
CDS-3UTR CAA 90 bp GTAGAAAGGCCCTTGGAATTTCCTACAAGGTTCAGTTCTGAACAGCTCCACTTCTGCCTATTCTCGTACTaGGGAAGAAATGTCTTTAAA +
Preference number: 5 (lower is better)
Translates to: VERPLEFPTRFSSEQLHFCLFSY*GRNVFK
Trigger: TTTAAAGACATTTCTTCCCAAGTACGAGAATAGGCA...GAAGTGGAGCTGTTCAGAACTGAACCTTGTAGGAAATTCCAAGGGCCTTTCTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
CDS-3UTR CAA 90 bp AACTCTTGTTCTAAAGAGACATTCTGGCACTTCATCACAGCCAGTAGAAGAACATCAGTAGAAAGGCCCTaGGAATTTCCTACAAGGTTC +
Preference number: 5 (lower is better)
Translates to: NSCSKETFWHFITASRRTSVERP*EFPTRF
Trigger: GAACCTTGTAGGAAATTCCAAGGGCCTTTCTACTGA...TGTTCTTCTACTGGCTGTGATGAAGTGCCAGAATGTCTCTTTAGAACAAGAGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
CDS-3UTR CAA 90 bp GTAGAAAGGCCCTTGGAATTTCCTACAAGGTTCAGTTCTGAACAGCTCCACTTCGGAAAAACAAGCTGTTaGATTATGAAGGCAACACTT +
Preference number: 5 (lower is better)
Translates to: VERPLEFPTRFSSEQLHFGKTSC*IMKATL
Trigger: AAGTGTTGCCTTCATAATCAAACAGCTTGTTTTTCC...GAAGTGGAGCTGTTCAGAACTGAACCTTGTAGGAAATTCCAAGGGCCTTTCTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
CDS-3UTR CAA 90 bp TTTGACGTCTTCCACTCCAAACGCTCTAATCTAGTCAGAAAAGAGCACAGCTCTGTAAACAGGAACAGTTaGCATGGGGATTGGAAAAAT +
Preference number: 5 (lower is better)
Translates to: FDVFHSKRSNLVRKEHSSVNRNS*HGDWKN
Trigger: ATTTTTCCAATCCCCATGCAAACTGTTCCTGTTTAC...AGAGCTGTGCTCTTTTCTGACTAGATTAGAGCGTTTGGAGTGGAAGACGTCAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
CDS-3UTR CAA 90 bp ACTCATTTTTGGCAAAGTGCTGTATTGTTCAGTCTGTGTACAAAACTGACCATCGTTGTTCCAGAAAAGTaGTATGAGCAGCAAGAGCTG +
Preference number: 5 (lower is better)
Translates to: THFWQSAVLFSLCTKLTIVVPEK*YEQQEL
Trigger: CAGCTCTTGCTGCTCATACAACTTTTCTGGAACAAC...GATGGTCAGTTTTGTACACAGACTGAACAATACAGCACTTTGCCAAAAATGAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
CDS-3UTR CAA 90 bp AAGAAGGCACATGTACAGTCTACAATACTCTTCAGTCTCCCTAACTCATGCCCTTGCCTATTCTCGTACTaGGGAAGAAATGTCTTTAAA +
Preference number: 5 (lower is better)
Translates to: KKAHVQSTILFSLPNSCPCLFSY*GRNVFK
Trigger: TTTAAAGACATTTCTTCCCAAGTACGAGAATAGGCA...AGGGCATGAGTTAGGGAGACTGAAGAGTATTGTAGACTGTACATGTGCCTTCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
CDS-3UTR CAA 90 bp GAAAGTCCAGCCATAATTCCATTATATCCATGGCAACTATCACCTGTTAATGCTCATCTCACTACACATTaGACGTCTTCCACTCCAAAC +
Preference number: 5 (lower is better)
Translates to: ESPAIIPLYPWQLSPVNAHLTTH*TSSTPN
Trigger: GTTTGGAGTGGAAGACGTCAAATGTGTAGTGAGATG...AGCATTAACAGGTGATAGTTGCCATGGATATAATGGAATTATGGCTGGACTTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
CDS-3UTR CAA 90 bp AGATTTTGGCGACGAAGGCTATTTCTGTTAAGAGGCTGTCTTTCACTGTGTTCTTGGCAAAGTGCTGTATaGTTCAGTCTGTGTACAAAA +
Preference number: 5 (lower is better)
Translates to: RFWRRRLFLLRGCLSLCSWQSAV*FSLCTK
Trigger: TTTTGTACACAGACTGAACAATACAGCACTTTGCCA...AGAACACAGTGAAAGACAGCCTCTTAACAGAAATAGCCTTCGTCGCCAAAATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448464.6
CDS-3UTR CAA 90 bp GAAAGTCCAGCCATAATTCCATTATATCCATGGCAACTATCACCTGTTAATGCTAATTCTGGTTCTTGGTaGGAGGAAGAACTGACTTCA +
Preference number: 5 (lower is better)
Translates to: ESPAIIPLYPWQLSPVNANSGSW*EEELTS
Trigger: TGAAGTCAGTTCTTCCTCCAACCAAGAACCAGAATT...AGCATTAACAGGTGATAGTTGCCATGGATATAATGGAATTATGGCTGGACTTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
CDS-3UTR CAA 90 bp CTAACAACTTACATGCAATGTATGAAAAAGAGACGCCGTGTATTCAGAGTTTTAGAAGGGCGAAAGCTCTaGGGTTGTTCCAGAAAAGTT +
Preference number: 5 (lower is better)
Translates to: LTTYMQCMKKRRRVFRVLEGRKL*GCSRKV
Trigger: AACTTTTCTGGAACAACCCAAGAGCTTTCGCCCTTC...TAAAACTCTGAATACACGGCGTCTCTTTTTCATACATTGCATGTAAGTTGTTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
CDS-3UTR CAA 90 bp TTCAGAAGCAGAAACAATGCTGAACAGCCTGCTCAAGTTTTAAATAAACTGTCTATCCCTGGTAAGATTTaGGCGACGAAGGCTATTTCT +
Preference number: 5 (lower is better)
Translates to: FRSRNNAEQPAQVLNKLSIPGKI*ATKAIS
Trigger: AGAAATAGCCTTCGTCGCCAAAATCTTACCAGGGAT...AGACAGTTTATTTAAAACTTGAGCAGGCTGTTCAGCATTGTTTCTGCTTCTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
CDS-3UTR CAA 90 bp TTGCCACAGAAGATAAATAATGGATGGCTAATTTTCACCTTACAGTGCAGTACAATCCCTGGTAAGATTTaGGCGACGAAGGCTATTTCT +
Preference number: 5 (lower is better)
Translates to: LPQKINNGWLIFTLQCSTIPGKI*ATKAIS
Trigger: AGAAATAGCCTTCGTCGCCAAAATCTTACCAGGGAT...TGTACTGCACTGTAAGGTGAAAATTAGCCATCCATTATTTATCTTCTGTGGCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
CDS-3UTR CAA 90 bp TACAAACATATACTACTAGTGTCTCCCAGTACAAGGAGCAGTCTCTTGACTCAAAAAATGAAAAGTCACTaGGACTGCAGGGAAGAATAC +
Preference number: 5 (lower is better)
Translates to: YKHILLVSPSTRSSLLTQKMKSH*DCREEY
Trigger: GTATTCTTCCCTGCAGTCCAAGTGACTTTTCATTTT...TTGAGTCAAGAGACTGCTCCTTGTACTGGGAGACACTAGTAGTATATGTTTGTA
40% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
CDS-3UTR CAA 90 bp CTAACAACTTACATGCAATGTATGAAAAAGAGACGCCGTGTATTCAGAGTTTTAGTGTTGTGGTTGGCCTaGTGTCTTACATACAGGAGA +
Preference number: 5 (lower is better)
Translates to: LTTYMQCMKKRRRVFRVLVLWLA*CLTYRR
Trigger: TCTCCTGTATGTAAGACACAAGGCCAACCACAACAC...TAAAACTCTGAATACACGGCGTCTCTTTTTCATACATTGCATGTAAGTTGTTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
CDS-3UTR CAA 90 bp CGTGTATTCAGAGTTTTACATCCTGAAGACATTAAGCTGGTCTATTTTCAAGTTGTGTTGTGGTTGGCCTaGTGTCTTACATACAGGAGA +
Preference number: 5 (lower is better)
Translates to: RVFRVLHPEDIKLVYFQVVLWLA*CLTYRR
Trigger: TCTCCTGTATGTAAGACACAAGGCCAACCACAACAC...AACTTGAAAATAGACCAGCTTAATGTCTTCAGGATGTAAAACTCTGAATACACG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
CDS-3UTR CAA 90 bp TCGTATAAAACATACACACCTTCATGGAAACTATCTTATCTCCCAACTCTGGTAATTGAATTCTGGTTCTaGGTTGGAGGAAGAACTGAC +
Preference number: 5 (lower is better)
Translates to: SYKTYTPSWKLSYLPTLVIEFWF*VGGRTD
Trigger: GTCAGTTCTTCCTCCAACCAAGAACCAGAATTCAAT...TACCAGAGTTGGGAGATAAGATAGTTTCCATGAAGGTGTGTATGTTTTATACGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
CDS-3UTR CAA 90 bp CTAACAACTTACATGCAATGTATGAAAAAGAGACGCCGTGTATTCAGAGTTTTAGGACTTGTTTCCACCTaGATAGTGGTTAATCCACCT +
Preference number: 5 (lower is better)
Translates to: LTTYMQCMKKRRRVFRVLGLVST*IVVNPP
Trigger: AGGTGGATTAACCACTATCAAGGTGGAAACAAGTCC...TAAAACTCTGAATACACGGCGTCTCTTTTTCATACATTGCATGTAAGTTGTTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
CDS CCA 90 bp ACAAGAATCCATTCATCATCTTCTTTCTCATTGAATTCTGGTTCTTaGTTGGAGGAAGAACTGACTTCACCCACAAACATTTTATTCAGC +
Preference number: 5 (lower is better)
Translates to: TRIHSSSSFSLNSGS*LEEELTSPTNILFS
Trigger: GCTGAATAAAATGTTTGTGGGTGAAGTCAGTTCTTCCTCCAACCAAGAACCAGAATTCAATGAGAAAGAAGATGATGAATGGATTCTTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
CDS-3UTR CAA 90 bp GAAAGTCCAGCCATAATTCCATTATATCCATGGCAACTATCACCTGTTAATGCTCCATTTATGCATAGATaGATGTACAGTAACCTAACC +
Preference number: 5 (lower is better)
Translates to: ESPAIIPLYPWQLSPVNAPFMHR*MYSNLT
Trigger: GGTTAGGTTACTGTACATCAATCTATGCATAAATGG...AGCATTAACAGGTGATAGTTGCCATGGATATAATGGAATTATGGCTGGACTTTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
CDS-3UTR CAA 90 bp TTGCCACAGAAGATAAATAATGGATGGCTAATTTTCACCTTACAGTGCAGTACACAGTTTGCATGGGGATaGGAAAAATGTATAGGAAAT +
Preference number: 5 (lower is better)
Translates to: LPQKINNGWLIFTLQCSTQFAWG*EKCIGN
Trigger: ATTTCCTATACATTTTTCCAATCCCCATGCAAACTG...TGTACTGCACTGTAAGGTGAAAATTAGCCATCCATTATTTATCTTCTGTGGCAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
CDS-3UTR CAA 90 bp CTAACAACTTACATGCAATGTATGAAAAAGAGACGCCGTGTATTCAGAGTTTTAGTAAACAGGAACAGTTaGCATGGGGATTGGAAAAAT +
Preference number: 5 (lower is better)
Translates to: LTTYMQCMKKRRRVFRVLVNRNS*HGDWKN
Trigger: ATTTTTCCAATCCCCATGCAAACTGTTCCTGTTTAC...TAAAACTCTGAATACACGGCGTCTCTTTTTCATACATTGCATGTAAGTTGTTAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
CDS TCA 72 bp GGCTATGTAATTCATCAGTCCCACGGGTGGCCTCACTaGGACCAGGGCAGGAGTTATGCACAGCATAGACAG +
Preference number: 6 (lower is better)
Translates to: GYVIHQSHGWPH*DQGRSYAQHRQ
Trigger: CTGTCTATGCTGTGCATAACTCCTGCCCTGGTCTCAGTGAGGCCACCCGTGGGACTGATGAATTACATAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
CDS TCA 72 bp GAGATTAAAGTGCACAGGGTGCTTATTCAACTTAGGTaGAAAGCAAGAAGAGTCATTGTACGTGGGCCCGGG +
Preference number: 6 (lower is better)
Translates to: EIKVHRVLIQLR*KARRVIVRGPG
Trigger: CCCGGGCCCACGTACAATGACTCTTCTTGCTTTTCACCTAAGTTGAATAAGCACCCTGTGCACTTTAATCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
CDS CAA 90 bp TCTCCTCCATTGGACATGACTCAAACTGGAGAAAGCAGGAATCACTaGTATCAGCCAAGCACTCAAGAGATGCCGGTAAACAGGAAAAGA +
Preference number: 6 (lower is better)
Translates to: SPPLDMTQTGESRNH*YQPSTQEMPVNRKR
Trigger: TCTTTTCCTGTTTACCGGCATCTCTTGAGTGCTTGGCTGATACAAGTGATTCCTGCTTTCTCCAGTTTGAGTCATGTCCAATGGAGGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
CDS GCA 72 bp CCCAATGGTACCGACAGGAGATTAAAGTGCACAGGGTaGTTATTCAACTTAGGTGAAAAGCAAGAAGAGTCA +
Preference number: 6 (lower is better)
Translates to: PNGTDRRLKCTG*LFNLGEKQEES
Trigger: TGACTCTTCTTGCTTTTCACCTAAGTTGAATAAGCACCCTGTGCACTTTAATCTCCTGTCGGTACCATTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
CDS GCA 72 bp TTTAGTTGGCCCAATGGTACCGACAGGAGATTAAAGTaGACAGGGTGCTTATTCAACTTAGGTGAAAAGCAA +
Preference number: 6 (lower is better)
Translates to: FSWPNGTDRRLK*TGCLFNLGEKQ
Trigger: TTGCTTTTCACCTAAGTTGAATAAGCACCCTGTGCACTTTAATCTCCTGTCGGTACCATTGGGCCAACTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
CDS TCA 72 bp TTCACTGATGTCCTCCTCTTCTTCTTCTTCTTCTGCTaGGAAACCAGTGCAAGTATCTATGAAGTCAACAAG +
Preference number: 6 (lower is better)
Translates to: FTDVLLFFFFFC*ETSASIYEVNK
Trigger: CTTGTTGACTTCATAGATACTTGCACTGGTTTCTCAGCAGAAGAAGAAGAAGAAGAGGAGGACATCAGTGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
CDS CAA 72 bp TCAATGAGAAGGTTTTCCATAGGACTTGTTTCCACCTaGATAGTGGTTAATCCACCTGCAGTAAAACATGGG +
Preference number: 6 (lower is better)
Translates to: SMRRFSIGLVST*IVVNPPAVKHG
Trigger: CCCATGTTTTACTGCAGGTGGATTAACCACTATCAAGGTGGAAACAAGTCCTATGGAAAACCTTCTCATTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
CDS TCA 72 bp TTTTATTCAGCCTCTGGAACATTGTTAAGGCAAGACTaGGAGTTTGGCTGGATGTCTTTTATAGCTGAGATT +
Preference number: 6 (lower is better)
Translates to: FYSASGTLLRQD*EFGWMSFIAEI
Trigger: AATCTCAGCTATAAAAGACATCCAGCCAAACTCTCAGTCTTGCCTTAACAATGTTCCAGAGGCTGAATAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
CDS TCA 72 bp CTTCTTCTTCTGCTGAGAAACCAGTGCAAGTATCTATaGAGTCAACAAGAATCCATTCATCATCTTCTTTCT +
Preference number: 6 (lower is better)
Translates to: LLLLLRNQCKYL*SQQESIHHLLS
Trigger: AGAAAGAAGATGATGAATGGATTCTTGTTGACTTCATAGATACTTGCACTGGTTTCTCAGCAGAAGAAGAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6
CDS CAA 90 bp AACAAGAATCCATTCATCATCTTCTTTCTCATTGAATTCTGGTTCTaGGTTGGAGGAAGAACTGACTTCACCCACAAACATTTTATTCAG +
Preference number: 6 (lower is better)
Translates to: NKNPFIIFFLIEFWF*VGGRTDFTHKHFIQ
Trigger: CTGAATAAAATGTTTGTGGGTGAAGTCAGTTCTTCCTCCAACCAAGAACCAGAATTCAATGAGAAAGAAGATGATGAATGGATTCTTGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342697.5
ENST00000448464.6