RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TP53AIP1 (Homo sapiens)

Ensembl gene IDs: ENSG00000120471

Ensembl transcript IDs: ENST00000458238.6, ENST00000525390.1, ENST00000527504.1, ENST00000530777.5, ENST00000531399.6, ENST00000602346.5

Found 346 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CCAGCACACCTGGGCCCTGCACCTCAGACGCTGCGTGTGAGCTTCTaGGGAGAGAAGTGTGGGCCTCCAGGGAGGTGTAGGCGCTCCTGG +
Preference number: 1 (lower is better)
Translates to: PAHLGPAPQTLRVSF*GEKCGPPGRCRRSW
Trigger: CCAGGAGCGCCTACACCTCCCTGGAGGCCCACACTTCTCTCCCCAGAAGCTCACACGCAGCGTCTGAGGTGCAGGGCCCAGGTGTGCTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527504.1
ENST00000602346.5
3UTR GCA 90 bp GCCCAGGCCTGGCCTGTGTCTGCTTCCGGAGCCATGCGCTGCCTGTaGTGGGATGAATGCATGGCCCCTGCATCCTTACCCCCTCCTCAG +
Preference number: 1 (lower is better)
Translates to: AQAWPVSASGAMRCL*WDECMAPASLPPPQ
Trigger: CTGAGGAGGGGGTAAGGATGCAGGGGCCATGCATTCATCCCAGCACAGGCAGCGCATGGCTCCGGAAGCAGACACAGGCCAGGCCTGGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000527504.1
ENST00000602346.5
3UTR TCA 90 bp TTGTCACCCCAGCACACCTGGGCCCTGCACCTCAGACGCTGCGTGTaGGCTTCTGGGGAGAGAAGTGTGGGCCTCCAGGGAGGTGTAGGC +
Preference number: 1 (lower is better)
Translates to: LSPQHTWALHLRRCV*ASGERSVGLQGGVG
Trigger: GCCTACACCTCCCTGGAGGCCCACACTTCTCTCCCCAGAAGCTCACACGCAGCGTCTGAGGTGCAGGGCCCAGGTGTGCTGGGGTGACAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000527504.1
ENST00000602346.5
3UTR CCA 90 bp CAGGCCTGGCCTGTGTCTGCTTCCGGAGCCATGCGCTGCCTGTGCTaGGATGAATGCATGGCCCCTGCATCCTTACCCCCTCCTCAGAGC +
Preference number: 1 (lower is better)
Translates to: QAWPVSASGAMRCLC*DECMAPASLPPPQS
Trigger: GCTCTGAGGAGGGGGTAAGGATGCAGGGGCCATGCATTCATCCCAGCACAGGCAGCGCATGGCTCCGGAAGCAGACACAGGCCAGGCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000527504.1
ENST00000602346.5
3UTR TCA 90 bp CTGGCCTGTGTCTGCTTCCGGAGCCATGCGCTGCCTGTGCTGGGATaGATGCATGGCCCCTGCATCCTTACCCCCTCCTCAGAGCCCACA +
Preference number: 1 (lower is better)
Translates to: LACVCFRSHALPVLG*MHGPCILTPSSEPT
Trigger: TGTGGGCTCTGAGGAGGGGGTAAGGATGCAGGGGCCATGCATTCATCCCAGCACAGGCAGCGCATGGCTCCGGAAGCAGACACAGGCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000527504.1
ENST00000602346.5
3UTR GCA 90 bp CCTGTGTCTGCTTCCGGAGCCATGCGCTGCCTGTGCTGGGATGAATaGATGGCCCCTGCATCCTTACCCCCTCCTCAGAGCCCACAAGCT +
Preference number: 1 (lower is better)
Translates to: PVSASGAMRCLCWDE*MAPASLPPPQSPQA
Trigger: AGCTTGTGGGCTCTGAGGAGGGGGTAAGGATGCAGGGGCCATGCATTCATCCCAGCACAGGCAGCGCATGGCTCCGGAAGCAGACACAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000527504.1
ENST00000602346.5
3UTR CCA 90 bp CCACAGGGAAGGGAGAAAAGCCAGTGCAGGTTGTGGCATCCAATGTaGGCGATTGAGGTCATGCCCACTGGGGATCCTCGGAAGTGTCAT +
Preference number: 1 (lower is better)
Translates to: PQGREKSQCRLWHPM*AIEVMPTGDPRKCH
Trigger: ATGACACTTCCGAGGATCCCCAGTGGGCATGACCTCAATCGCCCACATTGGATGCCACAACCTGCACTGGCTTTTCTCCCTTCCCTGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458238.6
3UTR TCA 90 bp GTCCTGCCCATGTACACACAGCTCCTAAGTGGTAGAGTCAGGATTTaGACCCAGACCCCGCAGCCTGGCTCCATGCTCTCAACAGCTTTG +
Preference number: 1 (lower is better)
Translates to: VLPMYTQLLSGRVRI*TQTPQPGSMLSTAL
Trigger: CAAAGCTGTTGAGAGCATGGAGCCAGGCTGCGGGGTCTGGGTTCAAATCCTGACTCTACCACTTAGGAGCTGTGTGTACATGGGCAGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602346.5
3UTR GCA 90 bp GGCACCACCTTCCTTCCAAAAGCCTTGTTTCTCAGAAAACCTTTCTaGCTCCTAGAAACCCAGGATTCCGAGGAGGAGGAGGGCTGGCCT +
Preference number: 1 (lower is better)
Translates to: GTTFLPKALFLRKPF*LLETQDSEEEEGWP
Trigger: AGGCCAGCCCTCCTCCTCCTCGGAATCCTGGGTTTCTAGGAGGCAGAAAGGTTTTCTGAGAAACAAGGCTTTTGGAAGGAAGGTGGTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000527504.1
ENST00000602346.5
3UTR GCA 90 bp TTCATTATTGGCCACAGGAAACGACTTCTTGGAGTAAGTGACTGGTaGTCCGAGGCCCATCTGGACAAAAGCAGGATCCGGGGTGGACGC +
Preference number: 1 (lower is better)
Translates to: FIIGHRKRLLGVSDW*SEAHLDKSRIRGGR
Trigger: GCGTCCACCCCGGATCCTGCTTTTGTCCAGATGGGCCTCGGAGCACCAGTCACTTACTCCAAGAAGTCGTTTCCTGTGGCCAATAATGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000527504.1
ENST00000602346.5
3UTR GCA 90 bp GCCCCTGCATCCTTACCCCCTCCTCAGAGCCCACAAGCTTCCGAGTaGGTCATCTTCATTATTGGCCACAGGAAACGACTTCTTGGAGTA +
Preference number: 1 (lower is better)
Translates to: APASLPPPQSPQASE*VIFIIGHRKRLLGV
Trigger: TACTCCAAGAAGTCGTTTCCTGTGGCCAATAATGAAGATGACGCACTCGGAAGCTTGTGGGCTCTGAGGAGGGGGTAAGGATGCAGGGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000527504.1
ENST00000602346.5
3UTR TCA 90 bp CGTCATCTTCATTATTGGCCACAGGAAACGACTTCTTGGAGTAAGTaGCTGGTGCTCCGAGGCCCATCTGGACAAAAGCAGGATCCGGGG +
Preference number: 1 (lower is better)
Translates to: RHLHYWPQETTSWSK*LVLRGPSGQKQDPG
Trigger: CCCCGGATCCTGCTTTTGTCCAGATGGGCCTCGGAGCACCAGTCACTTACTCCAAGAAGTCGTTTCCTGTGGCCAATAATGAAGATGACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527504.1
ENST00000602346.5
3UTR TCA 90 bp GATCCAGACGAGACTGACAGAGCTTCTATTCCCCGGCACCCTCCGTaGACTTGGGCACCCAAAACTAAGGGATCTGAAACCTCAGCAAAG +
Preference number: 1 (lower is better)
Translates to: DPDETDRASIPRHPP*TWAPKTKGSETSAK
Trigger: CTTTGCTGAGGTTTCAGATCCCTTAGTTTTGGGTGCCCAAGTTCACGGAGGGTGCCGGGGAATAGAAGCTCTGTCAGTCTCGTCTGGATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527504.1
3UTR CCA 90 bp GAACTTGGGCACCCAAAACTAAGGGATCTGAAACCTGAGAGGAAATaGAAGCAGACTGTGAGGCCCTGCAGCGCCGTCTCTTGGATGGTT +
Preference number: 1 (lower is better)
Translates to: ELGHPKLRDLKPERK*KQTVRPCSAVSWMV
Trigger: AACCATCCAAGAGACGGCGCTGCAGGGCCTCACAGTCTGCTTCCATTTCCTCTCAGGTTTCAGATCCCTTAGTTTTGGGTGCCCAAGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602346.5
3UTR CCA 90 bp ATCTTCATTATTGGCCACAGGAAACGACTTCTTGGAGTAAGTGACTaGTGCTCCGAGGCCCATCTGGACAAAAGCAGGATCCGGGGTGGA +
Preference number: 1 (lower is better)
Translates to: IFIIGHRKRLLGVSD*CSEAHLDKSRIRGG
Trigger: TCCACCCCGGATCCTGCTTTTGTCCAGATGGGCCTCGGAGCACCAGTCACTTACTCCAAGAAGTCGTTTCCTGTGGCCAATAATGAAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000527504.1
ENST00000602346.5
3UTR CCA 90 bp GCATTTCACCTCAGCAAAGTGATGACGCTGCCACTCAGGTTCCCATaGAAACCAAACTGGGACAGGAGGAACAAAAGGCTCCTCAAGGTC +
Preference number: 1 (lower is better)
Translates to: AFHLSKVMTLPLRFP*KPNWDRRNKRLLKV
Trigger: GACCTTGAGGAGCCTTTTGTTCCTCCTGTCCCAGTTTGGTTTCCATGGGAACCTGAGTGGCAGCGTCATCACTTTGCTGAGGTGAAATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602346.5
3UTR CCA 90 bp CCACATGCGTCCTTTGTTCAGCCTCTCCATTTAGCTCTCACTTTCTaGATGCAGCCAGGCACCACCTTCCTTCCAAAAGCCTTGTTTCTC +
Preference number: 1 (lower is better)
Translates to: PHASFVQPLHLALTF*MQPGTTFLPKALFL
Trigger: GAGAAACAAGGCTTTTGGAAGGAAGGTGGTGCCTGGCTGCATCCAGAAAGTGAGAGCTAAATGGAGAGGCTGAACAAAGGACGCATGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527504.1
ENST00000602346.5
3UTR TCA 90 bp TGTGAGATGGAAGCTATTATCATTCCATTTTACAGACACCTACACTaGGACTCAGGCAGGCCAGTTGTCCTGCCCATGTACACACAGCTC +
Preference number: 1 (lower is better)
Translates to: CEMEAIIIPFYRHLH*DSGRPVVLPMYTQL
Trigger: GAGCTGTGTGTACATGGGCAGGACAACTGGCCTGCCTGAGTCTCAGTGTAGGTGTCTGTAAAATGGAATGATAATAGCTTCCATCTCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602346.5
3UTR CCA 90 bp CTGTCCTATTGTCCAGCATCCTATGGCCCATTCCAGAAAGTTCAGTaGGTGTCAATTAGCTTGGCTGTAGTGACCACTCTTAAGTGTACC +
Preference number: 1 (lower is better)
Translates to: LSYCPASYGPFQKVQ*VSISLAVVTTLKCT
Trigger: GGTACACTTAAGAGTGGTCACTACAGCCAAGCTAATTGACACCCACTGAACTTTCTGGAATGGGCCATAGGATGCTGGACAATAGGACAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602346.5
3UTR CCA 90 bp AGCATTTCATATCTATCATTTTACCCACACAGTGAATCTGTGAGATaGAAGCTATTATCATTCCATTTTACAGACACCTACACTGAGACT +
Preference number: 1 (lower is better)
Translates to: SISYLSFYPHSESVR*KLLSFHFTDTYTET
Trigger: AGTCTCAGTGTAGGTGTCTGTAAAATGGAATGATAATAGCTTCCATCTCACAGATTCACTGTGTGGGTAAAATGATAGATATGAAATGCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602346.5
3UTR TCA 90 bp TTCTTAGCATTTCATATCTATCATTTTACCCACACAGTGAATCTGTaGGATGGAAGCTATTATCATTCCATTTTACAGACACCTACACTG +
Preference number: 1 (lower is better)
Translates to: FLAFHIYHFTHTVNL*DGSYYHSILQTPTL
Trigger: CAGTGTAGGTGTCTGTAAAATGGAATGATAATAGCTTCCATCTCACAGATTCACTGTGTGGGTAAAATGATAGATATGAAATGCTAAGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602346.5
3UTR-3UTR GCA 90 bp GCTCGGGGCTTTGTCACCCCAGCACACCTGGGCCCTGCACCTCAGACGCTGCGTCTGCTTCCGGAGCCATaGGCTGCCTGTGCTGGGATG +
Preference number: 2 (lower is better)
Translates to: ARGFVTPAHLGPAPQTLRLLPEP*AACAGM
Trigger: CATCCCAGCACAGGCAGCGCATGGCTCCGGAAGCAG...ACGCAGCGTCTGAGGTGCAGGGCCCAGGTGTGCTGGGGTGACAAAGCCCCGAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000527504.1
ENST00000602346.5
3UTR-3UTR CCA 90 bp ACCACAGCTCGGGGCTTTGTCACCCCAGCACACCTGGGCCCTGCACCTCAGACGGAGGAGGAGGAGGGCTaGCCTTCCTCTTGGGACTAT +
Preference number: 2 (lower is better)
Translates to: TTARGFVTPAHLGPAPQTEEEEG*PSSWDY
Trigger: ATAGTCCCAAGAGGAAGGCCAGCCCTCCTCCTCCTC...CGTCTGAGGTGCAGGGCCCAGGTGTGCTGGGGTGACAAAGCCCCGAGCTGTGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000527504.1
ENST00000602346.5
3UTR-3UTR CCA 90 bp GCACCTCAGACGCTGCGTGTGAGCTTCTGGGGAGAGAAGTGTGGGCCTCCAGGGGCCGCTAGTCAGCGCTaGAGCCATTTCTCGACGGTG +
Preference number: 2 (lower is better)
Translates to: APQTLRVSFWGEKCGPPGAASQR*SHFSTV
Trigger: CACCGTCGAGAAATGGCTCCAGCGCTGACTAGCGGC...CCCTGGAGGCCCACACTTCTCTCCCCAGAAGCTCACACGCAGCGTCTGAGGTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602346.5
3UTR-3UTR GCA 90 bp TCTGGACAAAAGCAGGATCCGGGGTGGACGCAGAAGAGCAGGCCCGGAGCCCTGAGCCTTCCCTCCCCATaGGCTCCACATGCGTCCTTT +
Preference number: 2 (lower is better)
Translates to: SGQKQDPGWTQKSRPGALSLPSP*APHASF
Trigger: AAAGGACGCATGTGGAGCGCATGGGGAGGGAAGGCT...CAGGGCTCCGGGCCTGCTCTTCTGCGTCCACCCCGGATCCTGCTTTTGTCCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000527504.1
ENST00000602346.5
3UTR-3UTR CCA 90 bp GCCTGTGCTGGGATGAATGCATGGCCCCTGCATCCTTACCCCCTCCTCAGAGCCGCTCCGAGGCCCATCTaGACAAAAGCAGGATCCGGG +
Preference number: 2 (lower is better)
Translates to: ACAGMNAWPLHPYPLLRAAPRPI*TKAGSG
Trigger: CCCGGATCCTGCTTTTGTCCAGATGGGCCTCGGAGC...GGCTCTGAGGAGGGGGTAAGGATGCAGGGGCCATGCATTCATCCCAGCACAGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000527504.1
ENST00000602346.5
3UTR-3UTR GCA 90 bp TGCGCTGCCTGTGCTGGGATGAATGCATGGCCCCTGCATCCTTACCCCCTCCTCGGAGTAAGTGACTGGTaGTCCGAGGCCCATCTGGAC +
Preference number: 2 (lower is better)
Translates to: CAACAGMNAWPLHPYPLLGVSDW*SEAHLD
Trigger: GTCCAGATGGGCCTCGGAGCACCAGTCACTTACTCC...GAGGAGGGGGTAAGGATGCAGGGGCCATGCATTCATCCCAGCACAGGCAGCGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000527504.1
ENST00000602346.5
3UTR-3UTR GCA 90 bp TGCGCTGCCTGTGCTGGGATGAATGCATGGCCCCTGCATCCTTACCCCCTCCTCCCCATGCGCTCCACATaGGTCCTTTGTTCAGCCTCT +
Preference number: 2 (lower is better)
Translates to: CAACAGMNAWPLHPYPLLPMRST*VLCSAS
Trigger: AGAGGCTGAACAAAGGACGCATGTGGAGCGCATGGG...GAGGAGGGGGTAAGGATGCAGGGGCCATGCATTCATCCCAGCACAGGCAGCGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000527504.1
ENST00000602346.5
3UTR-3UTR GCA 90 bp GACTGTGAGGCCCTGCAGCGCCGTCTCTTGGATGGTTTATTCTTCTCTGGCAGGCTGCTTCCGGAGCCATaGGCTGCCTGTGCTGGGATG +
Preference number: 2 (lower is better)
Translates to: DCEALQRRLLDGLFFSGRLLPEP*AACAGM
Trigger: CATCCCAGCACAGGCAGCGCATGGCTCCGGAAGCAG...CCTGCCAGAGAAGAATAAACCATCCAAGAGACGGCGCTGCAGGGCCTCACAGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602346.5
3UTR-3UTR CCA 90 bp GGCCACAGGAAACGACTTCTTGGAGTAAGTGACTGGTGCTCCGAGGCCCATCTGAAGCAGGATCCGGGGTaGACGCAGAAGAGCAGGCCC +
Preference number: 2 (lower is better)
Translates to: GHRKRLLGVSDWCSEAHLKQDPG*TQKSRP
Trigger: GGGCCTGCTCTTCTGCGTCCACCCCGGATCCTGCTT...CAGATGGGCCTCGGAGCACCAGTCACTTACTCCAAGAAGTCGTTTCCTGTGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527504.1
ENST00000602346.5
3UTR-3UTR GCA 90 bp AAGATCCAGACGAGACTGACAGAGCTTCTATTCCCCGGCACCCTCCGTGAACTTGGCCTGGCCTGTGTCTaGTTCCGGAGCCATGCGCTG +
Preference number: 2 (lower is better)
Translates to: KIQTRLTELLFPGTLRELGLACV*FRSHAL
Trigger: CAGCGCATGGCTCCGGAAGCAGACACAGGCCAGGCC...AAGTTCACGGAGGGTGCCGGGGAATAGAAGCTCTGTCAGTCTCGTCTGGATCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527504.1
ENST00000602346.5
3UTR-3UTR GCA 90 bp TGCGTCATCTTCATTATTGGCCACAGGAAACGACTTCTTGGAGTAAGTGACTGGGCAGGCCCGGAGCCCTaGACCCCAGCCTTCCCTCCC +
Preference number: 2 (lower is better)
Translates to: CVIFIIGHRKRLLGVSDWAGPEP*TPAFPP
Trigger: GGGAGGGAAGGCTGGGGTGCAGGGCTCCGGGCCTGC...CCAGTCACTTACTCCAAGAAGTCGTTTCCTGTGGCCAATAATGAAGATGACGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527504.1
ENST00000602346.5
3UTR-3UTR CCA 90 bp AGACAGTTGCTGAGGACCAAGATCCAGACGAGACTGACAGAGCTTCTATTCCCCCTCCTGGCAGACTCCTaGCCCAGGCCTGGCCTGTGT +
Preference number: 2 (lower is better)
Translates to: RQLLRTKIQTRLTELLFPLLADS*PRPGLC
Trigger: ACACAGGCCAGGCCTGGGCCAGGAGTCTGCCAGGAG...GGGGAATAGAAGCTCTGTCAGTCTCGTCTGGATCTTGGTCCTCAGCAACTGTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000527504.1
ENST00000602346.5
3UTR-3UTR GCA 90 bp TGCGCTGCCTGTGCTGGGATGAATGCATGGCCCCTGCATCCTTACCCCCTCCTCCCACAAGCTTCCGAGTaGGTCATCTTCATTATTGGC +
Preference number: 2 (lower is better)
Translates to: CAACAGMNAWPLHPYPLLPQASE*VIFIIG
Trigger: GCCAATAATGAAGATGACGCACTCGGAAGCTTGTGG...GAGGAGGGGGTAAGGATGCAGGGGCCATGCATTCATCCCAGCACAGGCAGCGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000527504.1
ENST00000602346.5
3UTR-3UTR CCA 90 bp AGTGCAGGTTGTGGCATCCAATGTGGGCGATTGAGGTCATGCCCACTGGGGATCGTGTCATGTAGACTATaGCTCAGCTGCAGCCCACCC +
Preference number: 2 (lower is better)
Translates to: SAGCGIQCGRLRSCPLGIVSCRL*LSCSPP
Trigger: GGGTGGGCTGCAGCTGAGCCATAGTCTACATGACAC...GATCCCCAGTGGGCATGACCTCAATCGCCCACATTGGATGCCACAACCTGCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458238.6
3UTR-3UTR CCA 90 bp ACAGAAGGATGCAAAATGAGGCAACCTAGCCACCCAACTGGCCCAGTGGTCAAGGCCGCTAGTCAGCGCTaGAGCCATTTCTCGACGGTG +
Preference number: 2 (lower is better)
Translates to: TEGCKMRQPSHPTGPVVKAASQR*SHFSTV
Trigger: CACCGTCGAGAAATGGCTCCAGCGCTGACTAGCGGC...CTTGACCACTGGGCCAGTTGGGTGGCTAGGTTGCCTCATTTTGCATCCTTCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531399.6
ENST00000602346.5
3UTR-3UTR GCA 90 bp AGAAAAGCCAGTGCAGGTTGTGGCATCCAATGTGGGCGATTGAGGTCATGCCCAAGGATGAGGCAGCTCTaGACACAGGCCAGGCAAGCT +
Preference number: 2 (lower is better)
Translates to: RKASAGCGIQCGRLRSCPRMRQL*TQARQA
Trigger: AGCTTGCCTGGCCTGTGTGCAGAGCTGCCTCATCCT...TGGGCATGACCTCAATCGCCCACATTGGATGCCACAACCTGCACTGGCTTTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458238.6
3UTR-3UTR GCA 90 bp GCCTGTGCTGGGATGAATGCATGGCCCCTGCATCCTTACCCCCTCCTCAGAGCCCTCAGAAAACCTTTCTaGCTCCTAGAAACCCAGGAT +
Preference number: 2 (lower is better)
Translates to: ACAGMNAWPLHPYPLLRALRKPF*LLETQD
Trigger: ATCCTGGGTTTCTAGGAGGCAGAAAGGTTTTCTGAG...GGCTCTGAGGAGGGGGTAAGGATGCAGGGGCCATGCATTCATCCCAGCACAGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000527504.1
ENST00000602346.5
3UTR-3UTR GCA 90 bp AAGATCCAGACGAGACTGACAGAGCTTCTATTCCCCGGCACCCTCCGTGAACTTGGAGTAAGTGACTGGTaGTCCGAGGCCCATCTGGAC +
Preference number: 2 (lower is better)
Translates to: KIQTRLTELLFPGTLRELGVSDW*SEAHLD
Trigger: GTCCAGATGGGCCTCGGAGCACCAGTCACTTACTCC...AAGTTCACGGAGGGTGCCGGGGAATAGAAGCTCTGTCAGTCTCGTCTGGATCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527504.1
ENST00000602346.5
3UTR-3UTR GCA 90 bp AGACAGTTGCTGAGGACCAAGATCCAGACGAGACTGACAGAGCTTCTATTCCCCTCCGGAGCCATGCGCTaGCTGTGCTGGGATGAATGC +
Preference number: 2 (lower is better)
Translates to: RQLLRTKIQTRLTELLFPSGAMR*LCWDEC
Trigger: GCATTCATCCCAGCACAGGCAGCGCATGGCTCCGGA...GGGGAATAGAAGCTCTGTCAGTCTCGTCTGGATCTTGGTCCTCAGCAACTGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527504.1
ENST00000602346.5
3UTR-3UTR TCA 90 bp AGACAGTTGCTGAGGACCAAGATCCAGACGAGACTGACAGAGCTTCTATTCCCCACTTCTTGGAGTAAGTaGCTGGTGCTCCGAGGCCCA +
Preference number: 2 (lower is better)
Translates to: RQLLRTKIQTRLTELLFPTSWSK*LVLRGP
Trigger: TGGGCCTCGGAGCACCAGTCACTTACTCCAAGAAGT...GGGGAATAGAAGCTCTGTCAGTCTCGTCTGGATCTTGGTCCTCAGCAACTGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527504.1
ENST00000602346.5
3UTR-3UTR TCA 90 bp CCGCAGCCTGGCTCCATGCTCTCAACAGCTTTGCAGAAACTAAAGTTGGAATGGACTTCTTGGAGTAAGTaGCTGGTGCTCCGAGGCCCA +
Preference number: 2 (lower is better)
Translates to: PQPGSMLSTALQKLKLEWTSWSK*LVLRGP
Trigger: TGGGCCTCGGAGCACCAGTCACTTACTCCAAGAAGT...CCATTCCAACTTTAGTTTCTGCAAAGCTGTTGAGAGCATGGAGCCAGGCTGCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602346.5
3UTR-3UTR GCA 90 bp AGAAAAGCCAGTGCAGGTTGTGGCATCCAATGTGGGCGATTGAGGTCATGCCCACCATTGGTTAAGGGTTaGCCTGGGGCTTTCAACTCC +
Preference number: 2 (lower is better)
Translates to: RKASAGCGIQCGRLRSCPPLVKG*PGAFNS
Trigger: GGAGTTGAAAGCCCCAGGGCAACCCTTAACCAATGG...TGGGCATGACCTCAATCGCCCACATTGGATGCCACAACCTGCACTGGCTTTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458238.6
3UTR-3UTR CCA 90 bp AGAAAAGCCAGTGCAGGTTGTGGCATCCAATGTGGGCGATTGAGGTCATGCCCAATGCTTTTCCCCCATTaGTTAAGGGTTGCCCTGGGG +
Preference number: 2 (lower is better)
Translates to: RKASAGCGIQCGRLRSCPMLFPH*LRVALG
Trigger: CCCCAGGGCAACCCTTAACCAATGGGGGAAAAGCAT...TGGGCATGACCTCAATCGCCCACATTGGATGCCACAACCTGCACTGGCTTTTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000458238.6
3UTR-3UTR GCA 90 bp CCGCAGCCTGGCTCCATGCTCTCAACAGCTTTGCAGAAACTAAAGTTGGAATGGCTGTGCTGGGATGAATaGATGGCCCCTGCATCCTTA +
Preference number: 2 (lower is better)
Translates to: PQPGSMLSTALQKLKLEWLCWDE*MAPASL
Trigger: TAAGGATGCAGGGGCCATGCATTCATCCCAGCACAG...CCATTCCAACTTTAGTTTCTGCAAAGCTGTTGAGAGCATGGAGCCAGGCTGCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602346.5
3UTR-3UTR TCA 90 bp GGATCCAGACAGTTGCTGAGGACCAAGATCCAGACGAGACTGACAGAGCTTCTACAGAAGGATGCAAAATaGGGCAACCTAGCCACCCAA +
Preference number: 2 (lower is better)
Translates to: GSRQLLRTKIQTRLTELLQKDAK*GNLATQ
Trigger: TTGGGTGGCTAGGTTGCCTCATTTTGCATCCTTCTG...TAGAAGCTCTGTCAGTCTCGTCTGGATCTTGGTCCTCAGCAACTGTCTGGATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602346.5
3UTR-3UTR GCA 90 bp GCTCATTCCAAATCTGTCCTATTGTCCAGCATCCTATGGCCCATTCCAGAAAGTAGCCTTCCCTCCCCATaGGCTCCACATGCGTCCTTT +
Preference number: 2 (lower is better)
Translates to: AHSKSVLLSSILWPIPESSLPSP*APHASF
Trigger: AAAGGACGCATGTGGAGCGCATGGGGAGGGAAGGCT...ACTTTCTGGAATGGGCCATAGGATGCTGGACAATAGGACAGATTTGGAATGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602346.5
3UTR CAA 90 bp CTCACTTTCTGGATGCAGCCAGGCACCACCTTCCTTCCAAAAGCCTaGTTTCTCAGAAAACCTTTCTGCCTCCTAGAAACCCAGGATTCC +
Preference number: 2 (lower is better)
Translates to: LTFWMQPGTTFLPKA*FLRKPFCLLETQDS
Trigger: GGAATCCTGGGTTTCTAGGAGGCAGAAAGGTTTTCTGAGAAACAAGGCTTTTGGAAGGAAGGTGGTGCCTGGCTGCATCCAGAAAGTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000527504.1
ENST00000602346.5
3UTR-3UTR TCA 90 bp AGATTTGGGGATACAGAAGGATGCAAAATGAGGCAACCTAGCCACCCAACTGGCCAGAAGGATGCAAAATaGGGCAACCTAGCCACCCAA +
Preference number: 2 (lower is better)
Translates to: RFGDTEGCKMRQPSHPTGQKDAK*GNLATQ
Trigger: TTGGGTGGCTAGGTTGCCTCATTTTGCATCCTTCTG...GCCAGTTGGGTGGCTAGGTTGCCTCATTTTGCATCCTTCTGTATCCCCAAATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000531399.6
ENST00000602346.5
3UTR-3UTR GCA 90 bp AGATTTGGGGATACAGAAGGATGCAAAATGAGGCAACCTAGCCACCCAACTGGCGGGGATACAGAAGGATaGAAAATGAGGCAACCTAGC +
Preference number: 2 (lower is better)
Translates to: RFGDTEGCKMRQPSHPTGGDTEG*KMRQPS
Trigger: GCTAGGTTGCCTCATTTTGCATCCTTCTGTATCCCC...GCCAGTTGGGTGGCTAGGTTGCCTCATTTTGCATCCTTCTGTATCCCCAAATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000531399.6
ENST00000602346.5
3UTR-3UTR TCA 90 bp ATAAAATACATCCACAGCAGTTTACAACTCTGCCATGATGTCATTTTGTCAGATCTCAGACGCTGCGTGTaGGCTTCTGGGGAGAGAAGT +
Preference number: 2 (lower is better)
Translates to: IKYIHSSLQLCHDVILSDLRRCV*ASGERS
Trigger: ACTTCTCTCCCCAGAAGCTCACACGCAGCGTCTGAG...ATCTGACAAAATGACATCATGGCAGAGTTGTAAACTGCTGTGGATGTATTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000602346.5
3UTR-3UTR CCA 90 bp TGGAGTCCTTGTTATTTACCAAATATCATGTTACAGACCAGGGATAAAAACAACGAGGAGGAGGAGGGCTaGCCTTCCTCTTGGGACTAT +
Preference number: 2 (lower is better)
Translates to: WSPCYLPNIMLQTRDKNNEEEEG*PSSWDY
Trigger: ATAGTCCCAAGAGGAAGGCCAGCCCTCCTCCTCCTC...GTTGTTTTTATCCCTGGTCTGTAACATGATATTTGGTAAATAACAAGGACTCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000602346.5
3UTR CAA 90 bp GCATCCTATGGCCCATTCCAGAAAGTTCAGTGGGTGTCAATTAGCTaGGCTGTAGTGACCACTCTTAAGTGTACCGTTACCTTTTATTTT +
Preference number: 2 (lower is better)
Translates to: ASYGPFQKVQWVSIS*AVVTTLKCTVTFYF
Trigger: AAAATAAAAGGTAACGGTACACTTAAGAGTGGTCACTACAGCCAAGCTAATTGACACCCACTGAACTTTCTGGAATGGGCCATAGGATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602346.5
3UTR-3UTR GCA 90 bp TTTGCAAAACGTATGGAGTCCTTGTTATTTACCAAATATCATGTTACAGACCAGCCCATGCGCTCCACATaGGTCCTTTGTTCAGCCTCT +
Preference number: 2 (lower is better)
Translates to: FAKRMESLLFTKYHVTDQPMRST*VLCSAS
Trigger: AGAGGCTGAACAAAGGACGCATGTGGAGCGCATGGG...CTGGTCTGTAACATGATATTTGGTAAATAACAAGGACTCCATACGTTTTGCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602346.5
3UTR GCA 72 bp CAGGCCTGGCCTGTGTCTGCTTCCGGAGCCATGCGCTaGCTGTGCTGGGATGAATGCATGGCCCCTGCATCC +
Preference number: 3 (lower is better)
Translates to: QAWPVSASGAMR*LCWDECMAPAS
Trigger: GGATGCAGGGGCCATGCATTCATCCCAGCACAGGCAGCGCATGGCTCCGGAAGCAGACACAGGCCAGGCCTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527504.1
ENST00000602346.5
3UTR CCA 72 bp CTGGGCCCTGCACCTCAGACGCTGCGTGTGAGCTTCTaGGGAGAGAAGTGTGGGCCTCCAGGGAGGTGTAGG +
Preference number: 3 (lower is better)
Translates to: LGPAPQTLRVSF*GEKCGPPGRCR
Trigger: CCTACACCTCCCTGGAGGCCCACACTTCTCTCCCCAGAAGCTCACACGCAGCGTCTGAGGTGCAGGGCCCAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527504.1
ENST00000602346.5
3UTR-3UTR CAA 90 bp CAGCTCGGGGCTTTGTCACCCCAGCACACCTGGGCCCTGCACCTCAGACGCTGCGGGCTGGCCTTCCTCTaGGGACTATTGATCAGGGCT +
Preference number: 3 (lower is better)
Translates to: QLGALSPQHTWALHLRRCGLAFL*GLLIRA
Trigger: AGCCCTGATCAATAGTCCCAAGAGGAAGGCCAGCCC...GCAGCGTCTGAGGTGCAGGGCCCAGGTGTGCTGGGGTGACAAAGCCCCGAGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000527504.1
ENST00000602346.5
3UTR GCA 72 bp GCTTCCGGAGCCATGCGCTGCCTGTGCTGGGATGAATaGATGGCCCCTGCATCCTTACCCCCTCCTCAGAGC +
Preference number: 3 (lower is better)
Translates to: ASGAMRCLCWDE*MAPASLPPPQS
Trigger: GCTCTGAGGAGGGGGTAAGGATGCAGGGGCCATGCATTCATCCCAGCACAGGCAGCGCATGGCTCCGGAAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000527504.1
ENST00000602346.5
3UTR TCA 72 bp GTCTGCTTCCGGAGCCATGCGCTGCCTGTGCTGGGATaGATGCATGGCCCCTGCATCCTTACCCCCTCCTCA +
Preference number: 3 (lower is better)
Translates to: VCFRSHALPVLG*MHGPCILTPSS
Trigger: TGAGGAGGGGGTAAGGATGCAGGGGCCATGCATTCATCCCAGCACAGGCAGCGCATGGCTCCGGAAGCAGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000527504.1
ENST00000602346.5
3UTR GCA 72 bp TGGCCTGTGTCTGCTTCCGGAGCCATGCGCTGCCTGTaGTGGGATGAATGCATGGCCCCTGCATCCTTACCC +
Preference number: 3 (lower is better)
Translates to: WPVSASGAMRCL*WDECMAPASLP
Trigger: GGGTAAGGATGCAGGGGCCATGCATTCATCCCAGCACAGGCAGCGCATGGCTCCGGAAGCAGACACAGGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527504.1
ENST00000602346.5
3UTR CCA 72 bp AGGGAGAAAAGCCAGTGCAGGTTGTGGCATCCAATGTaGGCGATTGAGGTCATGCCCACTGGGGATCCTCGG +
Preference number: 3 (lower is better)
Translates to: REKSQCRLWHPM*AIEVMPTGDPR
Trigger: CCGAGGATCCCCAGTGGGCATGACCTCAATCGCCCACATTGGATGCCACAACCTGCACTGGCTTTTCTCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458238.6
3UTR TCA 72 bp AAGCCAGTGCAGGTTGTGGCATCCAATGTGGGCGATTaGGGTCATGCCCACTGGGGATCCTCGGAAGTGTCA +
Preference number: 3 (lower is better)
Translates to: KPVQVVASNVGD*GHAHWGSSEVS
Trigger: TGACACTTCCGAGGATCCCCAGTGGGCATGACCTCAATCGCCCACATTGGATGCCACAACCTGCACTGGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458238.6
3UTR GCA 72 bp GGCCACAGGAAACGACTTCTTGGAGTAAGTGACTGGTaGTCCGAGGCCCATCTGGACAAAAGCAGGATCCGG +
Preference number: 3 (lower is better)
Translates to: GHRKRLLGVSDW*SEAHLDKSRIR
Trigger: CCGGATCCTGCTTTTGTCCAGATGGGCCTCGGAGCACCAGTCACTTACTCCAAGAAGTCGTTTCCTGTGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527504.1
ENST00000602346.5
3UTR-3UTR CAA 90 bp GTTCAGCCTCTCCATTTAGCTCTCACTTTCTGGATGCAGCCAGGCACCACCTTCGGGCTGGCCTTCCTCTaGGGACTATTGATCAGGGCT +
Preference number: 3 (lower is better)
Translates to: VQPLHLALTFWMQPGTTFGLAFL*GLLIRA
Trigger: AGCCCTGATCAATAGTCCCAAGAGGAAGGCCAGCCC...GAAGGTGGTGCCTGGCTGCATCCAGAAAGTGAGAGCTAAATGGAGAGGCTGAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527504.1
ENST00000602346.5
3UTR TCA 72 bp GAGACTGACAGAGCTTCTATTCCCCGGCACCCTCCGTaGACTTGGGCACCCAAAACTAAGGGATCTGAAACC +
Preference number: 3 (lower is better)
Translates to: ETDRASIPRHPP*TWAPKTKGSET
Trigger: GGTTTCAGATCCCTTAGTTTTGGGTGCCCAAGTTCACGGAGGGTGCCGGGGAATAGAAGCTCTGTCAGTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000527504.1
ENST00000602346.5
3UTR TCA 72 bp ATGTACACACAGCTCCTAAGTGGTAGAGTCAGGATTTaGACCCAGACCCCGCAGCCTGGCTCCATGCTCTCA +
Preference number: 3 (lower is better)
Translates to: MYTQLLSGRVRI*TQTPQPGSMLS
Trigger: TGAGAGCATGGAGCCAGGCTGCGGGGTCTGGGTTCAAATCCTGACTCTACCACTTAGGAGCTGTGTGTACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602346.5
3UTR CCA 72 bp TGGAAGCAGACTGTGAGGCCCTGCAGCGCCGTCTCTTaGATGGTTTATTCTTCTCTGGCAGGTTTTCCCCTA +
Preference number: 3 (lower is better)
Translates to: WKQTVRPCSAVS*MVYSSLAGFPL
Trigger: TAGGGGAAAACCTGCCAGAGAAGAATAAACCATCCAAGAGACGGCGCTGCAGGGCCTCACAGTCTGCTTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602346.5
3UTR CCA 72 bp CACCCAAAACTAAGGGATCTGAAACCTGAGAGGAAATaGAAGCAGACTGTGAGGCCCTGCAGCGCCGTCTCT +
Preference number: 3 (lower is better)
Translates to: HPKLRDLKPERK*KQTVRPCSAVS
Trigger: AGAGACGGCGCTGCAGGGCCTCACAGTCTGCTTCCATTTCCTCTCAGGTTTCAGATCCCTTAGTTTTGGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602346.5
3UTR-3UTR CAA 90 bp AGAAAAGCCAGTGCAGGTTGTGGCATCCAATGTGGGCGATTGAGGTCATGCCCAAATGCTTTTCCCCCATaGGTTAAGGGTTGCCCTGGG +
Preference number: 3 (lower is better)
Translates to: RKASAGCGIQCGRLRSCPNAFPP*VKGCPG
Trigger: CCCAGGGCAACCCTTAACCAATGGGGGAAAAGCATT...TGGGCATGACCTCAATCGCCCACATTGGATGCCACAACCTGCACTGGCTTTTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000458238.6
3UTR-3UTR CAA 90 bp TCAGACGCTGCGTGTGAGCTTCTGGGGAGAGAAGTGTGGGCCTCCAGGGAGGTGGCTTTTATTTCAGATTaGGGGATACAGAAGGATGCA +
Preference number: 3 (lower is better)
Translates to: SDAACELLGREVWASREVAFISD*GIQKDA
Trigger: TGCATCCTTCTGTATCCCCAAATCTGAAATAAAAGC...CACCTCCCTGGAGGCCCACACTTCTCTCCCCAGAAGCTCACACGCAGCGTCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000602346.5
3UTR CCA 72 bp ATTGGCCACAGGAAACGACTTCTTGGAGTAAGTGACTaGTGCTCCGAGGCCCATCTGGACAAAAGCAGGATC +
Preference number: 3 (lower is better)
Translates to: IGHRKRLLGVSD*CSEAHLDKSRI
Trigger: GATCCTGCTTTTGTCCAGATGGGCCTCGGAGCACCAGTCACTTACTCCAAGAAGTCGTTTCCTGTGGCCAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527504.1
ENST00000602346.5
3UTR CCA 72 bp CTCAGCAAAGTGATGACGCTGCCACTCAGGTTCCCATaGAAACCAAACTGGGACAGGAGGAACAAAAGGCTC +
Preference number: 3 (lower is better)
Translates to: LSKVMTLPLRFP*KPNWDRRNKRL
Trigger: GAGCCTTTTGTTCCTCCTGTCCCAGTTTGGTTTCCATGGGAACCTGAGTGGCAGCGTCATCACTTTGCTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527504.1
ENST00000602346.5
3UTR TCA 72 bp CATTATTGGCCACAGGAAACGACTTCTTGGAGTAAGTaGCTGGTGCTCCGAGGCCCATCTGGACAAAAGCAG +
Preference number: 3 (lower is better)
Translates to: HYWPQETTSWSK*LVLRGPSGQKQ
Trigger: CTGCTTTTGTCCAGATGGGCCTCGGAGCACCAGTCACTTACTCCAAGAAGTCGTTTCCTGTGGCCAATAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527504.1
ENST00000602346.5
3UTR CCA 72 bp TCCTTTGTTCAGCCTCTCCATTTAGCTCTCACTTTCTaGATGCAGCCAGGCACCACCTTCCTTCCAAAAGCC +
Preference number: 3 (lower is better)
Translates to: SFVQPLHLALTF*MQPGTTFLPKA
Trigger: GGCTTTTGGAAGGAAGGTGGTGCCTGGCTGCATCCAGAAAGTGAGAGCTAAATGGAGAGGCTGAACAAAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527504.1
ENST00000602346.5
3UTR-3UTR CAA 90 bp AGACAGTTGCTGAGGACCAAGATCCAGACGAGACTGACAGAGCTTCTATTCCCCGCGTCATCTTCATTATaGGCCACAGGAAACGACTTC +
Preference number: 3 (lower is better)
Translates to: RQLLRTKIQTRLTELLFPASSSL*ATGNDF
Trigger: GAAGTCGTTTCCTGTGGCCAATAATGAAGATGACGC...GGGGAATAGAAGCTCTGTCAGTCTCGTCTGGATCTTGGTCCTCAGCAACTGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527504.1
ENST00000602346.5
3UTR CCA 72 bp TGTCCAGCATCCTATGGCCCATTCCAGAAAGTTCAGTaGGTGTCAATTAGCTTGGCTGTAGTGACCACTCTT +
Preference number: 3 (lower is better)
Translates to: CPASYGPFQKVQ*VSISLAVVTTL
Trigger: AAGAGTGGTCACTACAGCCAAGCTAATTGACACCCACTGAACTTTCTGGAATGGGCCATAGGATGCTGGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602346.5
3UTR TCA 72 bp TTTATTTCAGATTTGGGGATACAGAAGGATGCAAAATaGGGCAACCTAGCCACCCAACTGGCCCAGTGGTCA +
Preference number: 3 (lower is better)
Translates to: FISDLGIQKDAK*GNLATQLAQWS
Trigger: TGACCACTGGGCCAGTTGGGTGGCTAGGTTGCCTCATTTTGCATCCTTCTGTATCCCCAAATCTGAAATAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000531399.6
ENST00000602346.5
3UTR TCA 72 bp GAAGCTATTATCATTCCATTTTACAGACACCTACACTaGGACTCAGGCAGGCCAGTTGTCCTGCCCATGTAC +
Preference number: 3 (lower is better)
Translates to: EAIIIPFYRHLH*DSGRPVVLPMY
Trigger: GTACATGGGCAGGACAACTGGCCTGCCTGAGTCTCAGTGTAGGTGTCTGTAAAATGGAATGATAATAGCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602346.5
3UTR-3UTR CAA 90 bp TGGAGTCCTTGTTATTTACCAAATATCATGTTACAGACCAGGGATAAAAACAACACTCAGGCAGGCCAGTaGTCCTGCCCATGTACACAC +
Preference number: 3 (lower is better)
Translates to: WSPCYLPNIMLQTRDKNNTQAGQ*SCPCTH
Trigger: GTGTGTACATGGGCAGGACAACTGGCCTGCCTGAGT...GTTGTTTTTATCCCTGGTCTGTAACATGATATTTGGTAAATAACAAGGACTCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000602346.5
3UTR TCA 72 bp AATAAAATACATCCACAGCAGTTTACAACTCTGCCATaGTGTCATTTTGTCAGATGGCAAATTTCAGGAGAG +
Preference number: 3 (lower is better)
Translates to: NKIHPQQFTTLP*CHFVRWQISGE
Trigger: CTCTCCTGAAATTTGCCATCTGACAAAATGACATCATGGCAGAGTTGTAAACTGCTGTGGATGTATTTTATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602346.5
CDS-3UTR GCA 90 bp GCTCGGGGCTTTGTCACCCCAGCACACCTGGGCCCTGCACCTCAGACGCTGCGTAGCCGTCCCTGGAGATaGCCCTGGGCTCCTTGCGGG +
Preference number: 4 (lower is better)
Translates to: ARGFVTPAHLGPAPQTLRSRPWR*PWAPCG
Trigger: CCCGCAAGGAGCCCAGGGGCATCTCCAGGGACGGCT...ACGCAGCGTCTGAGGTGCAGGGCCCAGGTGTGCTGGGGTGACAAAGCCCCGAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000527504.1
ENST00000602346.5
CDS-3UTR TCA 90 bp CAGCTCGGGGCTTTGTCACCCCAGCACACCTGGGCCCTGCACCTCAGACGCTGCCAGAGGCTTTCGGAGTaGGCTGAGCAGGCGAGCCCG +
Preference number: 4 (lower is better)
Translates to: QLGALSPQHTWALHLRRCQRLSE*AEQASP
Trigger: CGGGCTCGCCTGCTCAGCTCACTCCGAAAGCCTCTG...GCAGCGTCTGAGGTGCAGGGCCCAGGTGTGCTGGGGTGACAAAGCCCCGAGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000527504.1
ENST00000602346.5
CDS-3UTR GCA 90 bp CTGGACAAAAGCAGGATCCGGGGTGGACGCAGAAGAGCAGGCCCGGAGCCCTGCAGCCGTCCCTGGAGATaGCCCTGGGCTCCTTGCGGG +
Preference number: 4 (lower is better)
Translates to: LDKSRIRGGRRRAGPEPCSRPWR*PWAPCG
Trigger: CCCGCAAGGAGCCCAGGGGCATCTCCAGGGACGGCT...GCAGGGCTCCGGGCCTGCTCTTCTGCGTCCACCCCGGATCCTGCTTTTGTCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000527504.1
ENST00000602346.5
CDS-3UTR GCA 90 bp TCAGACGCTGCGTGTGAGCTTCTGGGGAGAGAAGTGTGGGCCTCCAGGGAGGTGGCAGGCCCGGAGCCCTaGACCCCAGCCTTCCCTCCC +
Preference number: 4 (lower is better)
Translates to: SDAACELLGREVWASREVAGPEP*TPAFPP
Trigger: GGGAGGGAAGGCTGGGGTGCAGGGCTCCGGGCCTGC...CACCTCCCTGGAGGCCCACACTTCTCTCCCCAGAAGCTCACACGCAGCGTCTGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000527504.1
ENST00000602346.5
CDS-3UTR GCA 90 bp GCTCGGGGCTTTGTCACCCCAGCACACCTGGGCCCTGCACCTCAGACGCTGCGTTCGCCCAGGCTGGAGTaGAGTGGCGTGATCTCGGCT +
Preference number: 4 (lower is better)
Translates to: ARGFVTPAHLGPAPQTLRSPRLE*SGVISA
Trigger: AGCCGAGATCACGCCACTGCACTCCAGCCTGGGCGA...ACGCAGCGTCTGAGGTGCAGGGCCCAGGTGTGCTGGGGTGACAAAGCCCCGAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602346.5
3UTR CAA 72 bp GGCGCTTCCTCCCTCCCATCACCACAGCTCGGGGCTTaGTCACCCCAGCACACCTGGGCCCTGCACCTCAGA +
Preference number: 4 (lower is better)
Translates to: GASSLPSPQLGA*SPQHTWALHLR
Trigger: TCTGAGGTGCAGGGCCCAGGTGTGCTGGGGTGACAAAGCCCCGAGCTGTGGTGATGGGAGGGAGGAAGCGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000527504.1
ENST00000602346.5
CDS-3UTR TCA 90 bp CTGCGTGTGAGCTTCTGGGGAGAGAAGTGTGGGCCTCCAGGGAGGTGTAGGCGCGCTTTCGGAGTGAGCTaGGCAGGCGAGCCCGAGCAC +
Preference number: 4 (lower is better)
Translates to: LRVSFWGEKCGPPGRCRRAFGVS*AGEPEH
Trigger: GTGCTCGGGCTCGCCTGCTCAGCTCACTCCGAAAGC...GCGCCTACACCTCCCTGGAGGCCCACACTTCTCTCCCCAGAAGCTCACACGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527504.1
ENST00000602346.5
CDS-3UTR GCA 90 bp ACCACAGCTCGGGGCTTTGTCACCCCAGCACACCTGGGCCCTGCACCTCAGACGGCATGGCTGAGTTCCTaGCTGTCCTTGGCAGGCCCG +
Preference number: 4 (lower is better)
Translates to: TTARGFVTPAHLGPAPQTAWLSS*LSLAGP
Trigger: CGGGCCTGCCAAGGACAGGCAGGAACTCAGCCATGC...CGTCTGAGGTGCAGGGCCCAGGTGTGCTGGGGTGACAAAGCCCCGAGCTGTGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000527504.1
ENST00000602346.5
CDS-3UTR GCA 90 bp TCACCACAGCTCGGGGCTTTGTCACCCCAGCACACCTGGGCCCTGCACCTCAGAGGCCTGGCCTGTGTCTaGTTCCGGAGCCATGCGCTG +
Preference number: 4 (lower is better)
Translates to: SPQLGALSPQHTWALHLRGLACV*FRSHAL
Trigger: CAGCGCATGGCTCCGGAAGCAGACACAGGCCAGGCC...TCTGAGGTGCAGGGCCCAGGTGTGCTGGGGTGACAAAGCCCCGAGCTGTGGTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000527504.1
ENST00000602346.5
CDS-3UTR CCA 90 bp CTGGACAAAAGCAGGATCCGGGGTGGACGCAGAAGAGCAGGCCCGGAGCCCTGCAGGTGTAGGCGCTCCTaGCTCCTGGCAGACTCCTGG +
Preference number: 4 (lower is better)
Translates to: LDKSRIRGGRRRAGPEPCRCRRS*LLADSW
Trigger: CCAGGAGTCTGCCAGGAGCCAGGAGCGCCTACACCT...GCAGGGCTCCGGGCCTGCTCTTCTGCGTCCACCCCGGATCCTGCTTTTGTCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000527504.1
ENST00000602346.5
CDS-3UTR TCA 90 bp TCAGACGCTGCGTGTGAGCTTCTGGGGAGAGAAGTGTGGGCCTCCAGGGAGGTGCAGTGCTGCTGGGGGTaGAGGCAACGGGTGGGTGAG +
Preference number: 4 (lower is better)
Translates to: SDAACELLGREVWASREVQCCWG*RQRVGE
Trigger: CTCACCCACCCGTTGCCTTCACCCCCAGCAGCACTG...CACCTCCCTGGAGGCCCACACTTCTCTCCCCAGAAGCTCACACGCAGCGTCTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000527504.1
ENST00000602346.5
CDS-3UTR TCA 90 bp GCCTGTGCTGGGATGAATGCATGGCCCCTGCATCCTTACCCCCTCCTCAGAGCCATGTCGGCACCACGGTaGGAGCAGAGTCTGCCCGGG +
Preference number: 4 (lower is better)
Translates to: ACAGMNAWPLHPYPLLRAMSAPR*EQSLPG
Trigger: CCCGGGCAGACTCTGCTCTCACCGTGGTGCCGACAT...GGCTCTGAGGAGGGGGTAAGGATGCAGGGGCCATGCATTCATCCCAGCACAGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000527504.1
ENST00000602346.5
CDS-3UTR GCA 90 bp ACCACAGCTCGGGGCTTTGTCACCCCAGCACACCTGGGCCCTGCACCTCAGACGGCCATGCGCTGCCTGTaGTGGGATGAATGCATGGCC +
Preference number: 4 (lower is better)
Translates to: TTARGFVTPAHLGPAPQTAMRCL*WDECMA
Trigger: GGCCATGCATTCATCCCAGCACAGGCAGCGCATGGC...CGTCTGAGGTGCAGGGCCCAGGTGTGCTGGGGTGACAAAGCCCCGAGCTGTGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000527504.1
ENST00000602346.5
CDS-3UTR GCA 90 bp ACCACAGCTCGGGGCTTTGTCACCCCAGCACACCTGGGCCCTGCACCTCAGACGTCCGGAGCCATGCGCTaGCTGTGCTGGGATGAATGC +
Preference number: 4 (lower is better)
Translates to: TTARGFVTPAHLGPAPQTSGAMR*LCWDEC
Trigger: GCATTCATCCCAGCACAGGCAGCGCATGGCTCCGGA...CGTCTGAGGTGCAGGGCCCAGGTGTGCTGGGGTGACAAAGCCCCGAGCTGTGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000527504.1
ENST00000602346.5
CDS-3UTR GCA 90 bp TGCGCTGCCTGTGCTGGGATGAATGCATGGCCCCTGCATCCTTACCCCCTCCTCGGCCTGGCCTGTGTCTaGTTCCGGAGCCATGCGCTG +
Preference number: 4 (lower is better)
Translates to: CAACAGMNAWPLHPYPLLGLACV*FRSHAL
Trigger: CAGCGCATGGCTCCGGAAGCAGACACAGGCCAGGCC...GAGGAGGGGGTAAGGATGCAGGGGCCATGCATTCATCCCAGCACAGGCAGCGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000527504.1
ENST00000602346.5
CDS-3UTR GCA 90 bp TCACCACAGCTCGGGGCTTTGTCACCCCAGCACACCTGGGCCCTGCACCTCAGAAGCACACCTGGGCCCTaGACCTCAGACGCTGCGTGT +
Preference number: 4 (lower is better)
Translates to: SPQLGALSPQHTWALHLRSTPGP*TSDAAC
Trigger: ACACGCAGCGTCTGAGGTGCAGGGCCCAGGTGTGCT...TCTGAGGTGCAGGGCCCAGGTGTGCTGGGGTGACAAAGCCCCGAGCTGTGGTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000527504.1
ENST00000602346.5
CDS-3UTR CCA 90 bp TGCGCTGCCTGTGCTGGGATGAATGCATGGCCCCTGCATCCTTACCCCCTCCTCGTTCCTGCCTGTCCTTaGCAGGCCCGCAGTGGTGGG +
Preference number: 4 (lower is better)
Translates to: CAACAGMNAWPLHPYPLLVPACP*QARSGG
Trigger: CCCACCACTGCGGGCCTGCCAAGGACAGGCAGGAAC...GAGGAGGGGGTAAGGATGCAGGGGCCATGCATTCATCCCAGCACAGGCAGCGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000527504.1
ENST00000602346.5
CDS-3UTR TCA 90 bp CGGAAGTGTCATGTAGACTATGGCTCAGCTGCAGCCCACCCAGGGAAGCTGGGGCAGAGGCTTTCGGAGTaGGCTGAGCAGGCGAGCCCG +
Preference number: 4 (lower is better)
Translates to: RKCHVDYGSAAAHPGKLGQRLSE*AEQASP
Trigger: CGGGCTCGCCTGCTCAGCTCACTCCGAAAGCCTCTG...CCCCAGCTTCCCTGGGTGGGCTGCAGCTGAGCCATAGTCTACATGACACTTCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458238.6
CDS-3UTR GCA 90 bp CAGCTCGGGGCTTTGTCACCCCAGCACACCTGGGCCCTGCACCTCAGACGCTGCCTCTCACTTTCTGGATaGAGCCAGGCACCACCTTCC +
Preference number: 4 (lower is better)
Translates to: QLGALSPQHTWALHLRRCLSLSG*SQAPPS
Trigger: GGAAGGTGGTGCCTGGCTGCATCCAGAAAGTGAGAG...GCAGCGTCTGAGGTGCAGGGCCCAGGTGTGCTGGGGTGACAAAGCCCCGAGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000527504.1
ENST00000602346.5
CDS-3UTR GCA 90 bp CTGGACAAAAGCAGGATCCGGGGTGGACGCAGAAGAGCAGGCCCGGAGCCCTGCGGAGTAAGTGACTGGTaGTCCGAGGCCCATCTGGAC +
Preference number: 4 (lower is better)
Translates to: LDKSRIRGGRRRAGPEPCGVSDW*SEAHLD
Trigger: GTCCAGATGGGCCTCGGAGCACCAGTCACTTACTCC...GCAGGGCTCCGGGCCTGCTCTTCTGCGTCCACCCCGGATCCTGCTTTTGTCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000527504.1
ENST00000602346.5
CDS-3UTR TCA 90 bp AGCCAGTGCAGGTTGTGGCATCCAATGTGGGCGATTGAGGTCATGCCCACTGGGGCTTTCGGAGTGAGCTaGGCAGGCGAGCCCGAGCAC +
Preference number: 4 (lower is better)
Translates to: SQCRLWHPMWAIEVMPTGAFGVS*AGEPEH
Trigger: GTGCTCGGGCTCGCCTGCTCAGCTCACTCCGAAAGC...CCCAGTGGGCATGACCTCAATCGCCCACATTGGATGCCACAACCTGCACTGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458238.6
CDS-3UTR TCA 90 bp TCTGGACAAAAGCAGGATCCGGGGTGGACGCAGAAGAGCAGGCCCGGAGCCCTGCCACTGCAGGAAGCTTaGGCAGATCTGAAGCTCGCC +
Preference number: 4 (lower is better)
Translates to: SGQKQDPGWTQKSRPGALPLQEA*ADLKLA
Trigger: GGCGAGCTTCAGATCTGCTCAAGCTTCCTGCAGTGG...CAGGGCTCCGGGCCTGCTCTTCTGCGTCCACCCCGGATCCTGCTTTTGTCCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000527504.1
ENST00000602346.5
CDS-3UTR GCA 90 bp TGCGCTGCCTGTGCTGGGATGAATGCATGGCCCCTGCATCCTTACCCCCTCCTCGCCATGCGCTGCCTGTaGTGGGATGAATGCATGGCC +
Preference number: 4 (lower is better)
Translates to: CAACAGMNAWPLHPYPLLAMRCL*WDECMA
Trigger: GGCCATGCATTCATCCCAGCACAGGCAGCGCATGGC...GAGGAGGGGGTAAGGATGCAGGGGCCATGCATTCATCCCAGCACAGGCAGCGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000527504.1
ENST00000602346.5
CDS-3UTR CCA 90 bp TCAGACGCTGCGTGTGAGCTTCTGGGGAGAGAAGTGTGGGCCTCCAGGGAGGTGGGTGAAGGCAACGGGTaGGTGAGCACGGACAGTGTG +
Preference number: 4 (lower is better)
Translates to: SDAACELLGREVWASREVGEGNG*VSTDSV
Trigger: CACACTGTCCGTGCTCACCCACCCGTTGCCTTCACC...CACCTCCCTGGAGGCCCACACTTCTCTCCCCAGAAGCTCACACGCAGCGTCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527504.1
ENST00000602346.5
CDS-3UTR CCA 90 bp GCACCTCAGACGCTGCGTGTGAGCTTCTGGGGAGAGAAGTGTGGGCCTCCAGGGGAGGAGGAGGAGGGCTaGCCTTCCTCTTGGGACTAT +
Preference number: 4 (lower is better)
Translates to: APQTLRVSFWGEKCGPPGEEEEG*PSSWDY
Trigger: ATAGTCCCAAGAGGAAGGCCAGCCCTCCTCCTCCTC...CCCTGGAGGCCCACACTTCTCTCCCCAGAAGCTCACACGCAGCGTCTGAGGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000527504.1
ENST00000602346.5
CDS-3UTR CCA 90 bp TCAGACGCTGCGTGTGAGCTTCTGGGGAGAGAAGTGTGGGCCTCCAGGGAGGTGGCTCCGAGGCCCATCTaGACAAAAGCAGGATCCGGG +
Preference number: 4 (lower is better)
Translates to: SDAACELLGREVWASREVAPRPI*TKAGSG
Trigger: CCCGGATCCTGCTTTTGTCCAGATGGGCCTCGGAGC...CACCTCCCTGGAGGCCCACACTTCTCTCCCCAGAAGCTCACACGCAGCGTCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000527504.1
ENST00000602346.5
CDS-3UTR CCA 90 bp CTGGACAAAAGCAGGATCCGGGGTGGACGCAGAAGAGCAGGCCCGGAGCCCTGCCTTGGAGTAAGTGACTaGTGCTCCGAGGCCCATCTG +
Preference number: 4 (lower is better)
Translates to: LDKSRIRGGRRRAGPEPCLGVSD*CSEAHL
Trigger: CAGATGGGCCTCGGAGCACCAGTCACTTACTCCAAG...GCAGGGCTCCGGGCCTGCTCTTCTGCGTCCACCCCGGATCCTGCTTTTGTCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000527504.1
ENST00000602346.5
CDS-3UTR CCA 90 bp GCACCTCAGACGCTGCGTGTGAGCTTCTGGGGAGAGAAGTGTGGGCCTCCAGGGGCTGGGATGAATGCATaGCCCCTGCATCCTTACCCC +
Preference number: 4 (lower is better)
Translates to: APQTLRVSFWGEKCGPPGAGMNA*PLHPYP
Trigger: GGGGTAAGGATGCAGGGGCCATGCATTCATCCCAGC...CCCTGGAGGCCCACACTTCTCTCCCCAGAAGCTCACACGCAGCGTCTGAGGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000527504.1
ENST00000602346.5
CDS-3UTR TCA 90 bp CTGGACAAAAGCAGGATCCGGGGTGGACGCAGAAGAGCAGGCCCGGAGCCCTGCAAGCTTGAGCAGATCTaGAGCTCGCCTCAGAGGAAG +
Preference number: 4 (lower is better)
Translates to: LDKSRIRGGRRRAGPEPCKLEQI*SSPQRK
Trigger: CTTCCTCTGAGGCGAGCTTCAGATCTGCTCAAGCTT...GCAGGGCTCCGGGCCTGCTCTTCTGCGTCCACCCCGGATCCTGCTTTTGTCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000527504.1
ENST00000602346.5
CDS-3UTR TCA 90 bp GCCTGTGCTGGGATGAATGCATGGCCCCTGCATCCTTACCCCCTCCTCAGAGCCCCACTGCAGGAAGCTTaGGCAGATCTGAAGCTCGCC +
Preference number: 4 (lower is better)
Translates to: ACAGMNAWPLHPYPLLRAPLQEA*ADLKLA
Trigger: GGCGAGCTTCAGATCTGCTCAAGCTTCCTGCAGTGG...GGCTCTGAGGAGGGGGTAAGGATGCAGGGGCCATGCATTCATCCCAGCACAGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000527504.1
ENST00000602346.5
CDS-3UTR GCA 90 bp CTGCGTGTGAGCTTCTGGGGAGAGAAGTGTGGGCCTCCAGGGAGGTGTAGGCGCCCCATGCGCTCCACATaGGTCCTTTGTTCAGCCTCT +
Preference number: 4 (lower is better)
Translates to: LRVSFWGEKCGPPGRCRRPMRST*VLCSAS
Trigger: AGAGGCTGAACAAAGGACGCATGTGGAGCGCATGGG...GCGCCTACACCTCCCTGGAGGCCCACACTTCTCTCCCCAGAAGCTCACACGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000527504.1
ENST00000602346.5
CDS-3UTR CCA 90 bp TCTGGACAAAAGCAGGATCCGGGGTGGACGCAGAAGAGCAGGCCCGGAGCCCTGTCCAATGCTCTGAACTaGGGACAGTCCGCATGCAGC +
Preference number: 4 (lower is better)
Translates to: SGQKQDPGWTQKSRPGALSNALN*GQSACS
Trigger: GCTGCATGCGGACTGTCCCCAGTTCAGAGCATTGGA...CAGGGCTCCGGGCCTGCTCTTCTGCGTCCACCCCGGATCCTGCTTTTGTCCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000527504.1
ENST00000602346.5
CDS-3UTR CCA 90 bp GAAGGATGCAAAATGAGGCAACCTAGCCACCCAACTGGCCCAGTGGTCAAGGGGCTCCTGGCAGACTCCTaGCCCAGGCCTGGCCTGTGT +
Preference number: 4 (lower is better)
Translates to: EGCKMRQPSHPTGPVVKGLLADS*PRPGLC
Trigger: ACACAGGCCAGGCCTGGGCCAGGAGTCTGCCAGGAG...CCCCTTGACCACTGGGCCAGTTGGGTGGCTAGGTTGCCTCATTTTGCATCCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602346.5
CDS-3UTR CCA 90 bp TCACCACAGCTCGGGGCTTTGTCACCCCAGCACACCTGGGCCCTGCACCTCAGACAGGAAGGAAAGGCCTaGAGAGACCTAGACCAAGGC +
Preference number: 4 (lower is better)
Translates to: SPQLGALSPQHTWALHLRQEGKA*RDLDQG
Trigger: GCCTTGGTCTAGGTCTCTCCAGGCCTTTCCTTCCTG...TCTGAGGTGCAGGGCCCAGGTGTGCTGGGGTGACAAAGCCCCGAGCTGTGGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602346.5
CDS-3UTR TCA 90 bp GGGGATACAGAAGGATGCAAAATGAGGCAACCTAGCCACCCAACTGGCCCAGTGGCTTTCGGAGTGAGCTaGGCAGGCGAGCCCGAGCAC +
Preference number: 4 (lower is better)
Translates to: GDTEGCKMRQPSHPTGPVAFGVS*AGEPEH
Trigger: GTGCTCGGGCTCGCCTGCTCAGCTCACTCCGAAAGC...CACTGGGCCAGTTGGGTGGCTAGGTTGCCTCATTTTGCATCCTTCTGTATCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602346.5
CDS-3UTR TCA 90 bp GAGGTGGCCGCTAGTCAGCGCTGGAGCCATTTCTCGACGGTGCTTTCTGTTTGTCCAGGTGTGTGTGTCTaGGCCCTGCCATTCGGAGGC +
Preference number: 4 (lower is better)
Translates to: EVAASQRWSHFSTVLSVCPGVCV*ALPFGG
Trigger: GCCTCCGAATGGCAGGGCTCAGACACACACACCTGG...ACAAACAGAAAGCACCGTCGAGAAATGGCTCCAGCGCTGACTAGCGGCCACCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531399.6
ENST00000602346.5
CDS-3UTR TCA 90 bp GCACCTCAGACGCTGCGTGTGAGCTTCTGGGGAGAGAAGTGTGGGCCTCCAGGGGATCCAGACAGTTGCTaGGGACCAAGATCCAGACGA +
Preference number: 4 (lower is better)
Translates to: APQTLRVSFWGEKCGPPGDPDSC*GPRSRR
Trigger: TCGTCTGGATCTTGGTCCTCAGCAACTGTCTGGATC...CCCTGGAGGCCCACACTTCTCTCCCCAGAAGCTCACACGCAGCGTCTGAGGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000527504.1
ENST00000602346.5
CDS-3UTR GCA 90 bp GCCTGTGCTGGGATGAATGCATGGCCCCTGCATCCTTACCCCCTCCTCAGAGCCCTCTCACTTTCTGGATaGAGCCAGGCACCACCTTCC +
Preference number: 4 (lower is better)
Translates to: ACAGMNAWPLHPYPLLRALSLSG*SQAPPS
Trigger: GGAAGGTGGTGCCTGGCTGCATCCAGAAAGTGAGAG...GGCTCTGAGGAGGGGGTAAGGATGCAGGGGCCATGCATTCATCCCAGCACAGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000527504.1
ENST00000602346.5
CDS-3UTR CCA 90 bp AGTGCAGGTTGTGGCATCCAATGTGGGCGATTGAGGTCATGCCCACTGGGGATCATCACCGAGAGGTTCTaGTCTCCCCTGCCCAGGCCC +
Preference number: 4 (lower is better)
Translates to: SAGCGIQCGRLRSCPLGIITERF*SPLPRP
Trigger: GGGCCTGGGCAGGGGAGACCAGAACCTCTCGGTGAT...GATCCCCAGTGGGCATGACCTCAATCGCCCACATTGGATGCCACAACCTGCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458238.6
CDS-3UTR CCA 90 bp GTTGCTGAGGACCAAGATCCAGACGAGACTGACAGAGCTTCTATTCCCCGGCACGCAGGCCCGCAGTGGTaGGGTGGCTCAGGCAGTTAC +
Preference number: 4 (lower is better)
Translates to: VAEDQDPDETDRASIPRHAGPQW*GGSGSY
Trigger: GTAACTGCCTGAGCCACCCCACCACTGCGGGCCTGC...GTGCCGGGGAATAGAAGCTCTGTCAGTCTCGTCTGGATCTTGGTCCTCAGCAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527504.1
ENST00000602346.5
CDS-3UTR CCA 90 bp GAGGCCCTGCAGCGCCGTCTCTTGGATGGTTTATTCTTCTCTGGCAGGTTTTCCGCAGGCCCGCAGTGGTaGGGTGGCTCAGGCAGTTAC +
Preference number: 4 (lower is better)
Translates to: EALQRRLLDGLFFSGRFSAGPQW*GGSGSY
Trigger: GTAACTGCCTGAGCCACCCCACCACTGCGGGCCTGC...GGAAAACCTGCCAGAGAAGAATAAACCATCCAAGAGACGGCGCTGCAGGGCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602346.5
CDS-3UTR CCA 90 bp AATGAGGTGGCCGCTAGTCAGCGCTGGAGCCATTTCTCGACGGTGCTTTCTGTTTTGGCAGGCCCGCAGTaGTGGGGTGGCTCAGGCAGT +
Preference number: 4 (lower is better)
Translates to: NEVAASQRWSHFSTVLSVLAGPQ*WGGSGS
Trigger: ACTGCCTGAGCCACCCCACCACTGCGGGCCTGCCAA...AACAGAAAGCACCGTCGAGAAATGGCTCCAGCGCTGACTAGCGGCCACCTCATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602346.5
CDS-3UTR CCA 90 bp GCACCTCAGACGCTGCGTGTGAGCTTCTGGGGAGAGAAGTGTGGGCCTCCAGGGGTGAGTCTGAAAACTTaGGATGTCGGCACCACGGTG +
Preference number: 4 (lower is better)
Translates to: APQTLRVSFWGEKCGPPGVSLKT*DVGTTV
Trigger: CACCGTGGTGCCGACATCCCAAGTTTTCAGACTCAC...CCCTGGAGGCCCACACTTCTCTCCCCAGAAGCTCACACGCAGCGTCTGAGGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000527504.1
ENST00000602346.5
CDS-3UTR CCA 90 bp GTTGCTGAGGACCAAGATCCAGACGAGACTGACAGAGCTTCTATTCCCCGGCACCTCCTGGCAGACTCCTaGCCCAGGCCTGGCCTGTGT +
Preference number: 4 (lower is better)
Translates to: VAEDQDPDETDRASIPRHLLADS*PRPGLC
Trigger: ACACAGGCCAGGCCTGGGCCAGGAGTCTGCCAGGAG...GTGCCGGGGAATAGAAGCTCTGTCAGTCTCGTCTGGATCTTGGTCCTCAGCAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527504.1
ENST00000602346.5
CDS-3UTR CCA 90 bp GACTGTGAGGCCCTGCAGCGCCGTCTCTTGGATGGTTTATTCTTCTCTGGCAGGCCAGACCCCGCAGCCTaGCTCCATGCTCTCAACAGC +
Preference number: 4 (lower is better)
Translates to: DCEALQRRLLDGLFFSGRPDPAA*LHALNS
Trigger: GCTGTTGAGAGCATGGAGCCAGGCTGCGGGGTCTGG...CCTGCCAGAGAAGAATAAACCATCCAAGAGACGGCGCTGCAGGGCCTCACAGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602346.5
CDS-3UTR CCA 90 bp CAGCTCGGGGCTTTGTCACCCCAGCACACCTGGGCCCTGCACCTCAGACGCTGCTCTTCAGGGACAAGGTaGCCTTATACCAAGCCAAAG +
Preference number: 4 (lower is better)
Translates to: QLGALSPQHTWALHLRRCSSGTR*PYTKPK
Trigger: CTTTGGCTTGGTATAAGGCCACCTTGTCCCTGAAGA...GCAGCGTCTGAGGTGCAGGGCCCAGGTGTGCTGGGGTGACAAAGCCCCGAGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602346.5
CDS-3UTR CCA 90 bp CTGGACAAAAGCAGGATCCGGGGTGGACGCAGAAGAGCAGGCCCGGAGCCCTGCGTGTGCAGCAGAAATTaGCGTCTCTGCACAAAGCTG +
Preference number: 4 (lower is better)
Translates to: LDKSRIRGGRRRAGPEPCVCSRN*RLCTKL
Trigger: CAGCTTTGTGCAGAGACGCCAATTTCTGCTGCACAC...GCAGGGCTCCGGGCCTGCTCTTCTGCGTCCACCCCGGATCCTGCTTTTGTCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602346.5
CDS-3UTR TCA 90 bp AGTGCAGGTTGTGGCATCCAATGTGGGCGATTGAGGTCATGCCCACTGGGGATCGACTGGGTGCAGGTCTaGGCAGAGGCTTTCGGAGTG +
Preference number: 4 (lower is better)
Translates to: SAGCGIQCGRLRSCPLGIDWVQV*AEAFGV
Trigger: CACTCCGAAAGCCTCTGCTCAGACCTGCACCCAGTC...GATCCCCAGTGGGCATGACCTCAATCGCCCACATTGGATGCCACAACCTGCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458238.6
CDS-3UTR TCA 90 bp GGCCACAGGAAACGACTTCTTGGAGTAAGTGACTGGTGCTCCGAGGCCCATCTGGACTGGGTGCAGGTCTaGGCAGAGGCTTTCGGAGTG +
Preference number: 4 (lower is better)
Translates to: GHRKRLLGVSDWCSEAHLDWVQV*AEAFGV
Trigger: CACTCCGAAAGCCTCTGCTCAGACCTGCACCCAGTC...CAGATGGGCCTCGGAGCACCAGTCACTTACTCCAAGAAGTCGTTTCCTGTGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527504.1
ENST00000602346.5
CDS-3UTR TCA 90 bp TGGGGCTTTCAACTCCCAGAATTTCAGGATGAGGCAGCTCTGCACACAGGCCAGCCAGGTGTGTGTGTCTaGGCCCTGCCATTCGGAGGC +
Preference number: 4 (lower is better)
Translates to: WGFQLPEFQDEAALHTGQPGVCV*ALPFGG
Trigger: GCCTCCGAATGGCAGGGCTCAGACACACACACCTGG...CTGGCCTGTGTGCAGAGCTGCCTCATCCTGAAATTCTGGGAGTTGAAAGCCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458238.6
CDS-3UTR TCA 90 bp CCTCTCCATTTAGCTCTCACTTTCTGGATGCAGCCAGGCACCACCTTCCTTCCAACCAAGCCAAAGTGCTaGGGGCGCAGGGAGACCCGC +
Preference number: 4 (lower is better)
Translates to: PLHLALTFWMQPGTTFLPTKPKC*GRRETR
Trigger: GCGGGTCTCCCTGCGCCCTCAGCACTTTGGCTTGGT...TGGAAGGAAGGTGGTGCCTGGCTGCATCCAGAAAGTGAGAGCTAAATGGAGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602346.5
CDS-3UTR GCA 90 bp CCCACTGGGGATCCTCGGAAGTGTCATGTAGACTATGGCTCAGCTGCAGCCCACAGGATGAGGCAGCTCTaGACACAGGCCAGGCAAGCT +
Preference number: 4 (lower is better)
Translates to: PTGDPRKCHVDYGSAAAHRMRQL*TQARQA
Trigger: AGCTTGCCTGGCCTGTGTGCAGAGCTGCCTCATCCT...GTGGGCTGCAGCTGAGCCATAGTCTACATGACACTTCCGAGGATCCCCAGTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458238.6
CDS-3UTR GCA 90 bp CAGCCTCTCCATTTAGCTCTCACTTTCTGGATGCAGCCAGGCACCACCTTCCTTTGCCCCTGGGCTCCTTaGGGGGCATGGCTGAGTTCC +
Preference number: 4 (lower is better)
Translates to: QPLHLALTFWMQPGTTFLCPWAP*GAWLSS
Trigger: GGAACTCAGCCATGCCCCGCAAGGAGCCCAGGGGCA...AAGGAAGGTGGTGCCTGGCTGCATCCAGAAAGTGAGAGCTAAATGGAGAGGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000527504.1
ENST00000602346.5
CDS-3UTR GCA 90 bp GACTGTGAGGCCCTGCAGCGCCGTCTCTTGGATGGTTTATTCTTCTCTGGCAGGTCCGGAGCCATGCGCTaGCTGTGCTGGGATGAATGC +
Preference number: 4 (lower is better)
Translates to: DCEALQRRLLDGLFFSGRSGAMR*LCWDEC
Trigger: GCATTCATCCCAGCACAGGCAGCGCATGGCTCCGGA...CCTGCCAGAGAAGAATAAACCATCCAAGAGACGGCGCTGCAGGGCCTCACAGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602346.5
CDS-3UTR GCA 90 bp GGGGATACAGAAGGATGCAAAATGAGGCAACCTAGCCACCCAACTGGCCCAGTGTCGCCCAGGCTGGAGTaGAGTGGCGTGATCTCGGCT +
Preference number: 4 (lower is better)
Translates to: GDTEGCKMRQPSHPTGPVSPRLE*SGVISA
Trigger: AGCCGAGATCACGCCACTGCACTCCAGCCTGGGCGA...CACTGGGCCAGTTGGGTGGCTAGGTTGCCTCATTTTGCATCCTTCTGTATCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000531399.6
ENST00000602346.5
CDS-3UTR CCA 90 bp GGCCACAGGAAACGACTTCTTGGAGTAAGTGACTGGTGCTCCGAGGCCCATCTGCCCGCAGTGGTGGGGTaGCTCAGGCAGTTACCCTTT +
Preference number: 4 (lower is better)
Translates to: GHRKRLLGVSDWCSEAHLPAVVG*LRQLPF
Trigger: AAAGGGTAACTGCCTGAGCCACCCCACCACTGCGGG...CAGATGGGCCTCGGAGCACCAGTCACTTACTCCAAGAAGTCGTTTCCTGTGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527504.1
ENST00000602346.5
CDS-3UTR CCA 90 bp GGGGATACAGAAGGATGCAAAATGAGGCAACCTAGCCACCCAACTGGCCCAGTGAAGCAGGATCCGGGGTaGACGCAGAAGAGCAGGCCC +
Preference number: 4 (lower is better)
Translates to: GDTEGCKMRQPSHPTGPVKQDPG*TQKSRP
Trigger: GGGCCTGCTCTTCTGCGTCCACCCCGGATCCTGCTT...CACTGGGCCAGTTGGGTGGCTAGGTTGCCTCATTTTGCATCCTTCTGTATCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000602346.5
CDS-3UTR CCA 90 bp GGGGGAAATGAGGTGGCCGCTAGTCAGCGCTGGAGCCATTTCTCGACGGTGCTTCAGGAAGGAAAGGCCTaGAGAGACCTAGACCAAGGC +
Preference number: 4 (lower is better)
Translates to: GGNEVAASQRWSHFSTVLQEGKA*RDLDQG
Trigger: GCCTTGGTCTAGGTCTCTCCAGGCCTTTCCTTCCTG...AAGCACCGTCGAGAAATGGCTCCAGCGCTGACTAGCGGCCACCTCATTTCCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000531399.6
ENST00000602346.5
CDS-3UTR CCA 90 bp GTTCAGCCTCTCCATTTAGCTCTCACTTTCTGGATGCAGCCAGGCACCACCTTCCACGTGGCCGGGAGCTaGGCCAGCTCGCTGTATGTG +
Preference number: 4 (lower is better)
Translates to: VQPLHLALTFWMQPGTTFHVAGS*ASSLYV
Trigger: CACATACAGCGAGCTGGCCCAGCTCCCGGCCACGTG...GAAGGTGGTGCCTGGCTGCATCCAGAAAGTGAGAGCTAAATGGAGAGGCTGAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602346.5
CDS-3UTR TCA 90 bp CGGAAGTGTCATGTAGACTATGGCTCAGCTGCAGCCCACCCAGGGAAGCTGGGGAAGCTTGAGCAGATCTaGAGCTCGCCTCAGAGGAAG +
Preference number: 4 (lower is better)
Translates to: RKCHVDYGSAAAHPGKLGKLEQI*SSPQRK
Trigger: CTTCCTCTGAGGCGAGCTTCAGATCTGCTCAAGCTT...CCCCAGCTTCCCTGGGTGGGCTGCAGCTGAGCCATAGTCTACATGACACTTCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458238.6
CDS-3UTR TCA 90 bp GTTCAGCCTCTCCATTTAGCTCTCACTTTCTGGATGCAGCCAGGCACCACCTTCCCAGGTGTGTGTGTCTaGGCCCTGCCATTCGGAGGC +
Preference number: 4 (lower is better)
Translates to: VQPLHLALTFWMQPGTTFPGVCV*ALPFGG
Trigger: GCCTCCGAATGGCAGGGCTCAGACACACACACCTGG...GAAGGTGGTGCCTGGCTGCATCCAGAAAGTGAGAGCTAAATGGAGAGGCTGAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527504.1
ENST00000602346.5
CDS-3UTR TCA 90 bp ACAGAAGGATGCAAAATGAGGCAACCTAGCCACCCAACTGGCCCAGTGGTCAAGCCAGGTGTGTGTGTCTaGGCCCTGCCATTCGGAGGC +
Preference number: 4 (lower is better)
Translates to: TEGCKMRQPSHPTGPVVKPGVCV*ALPFGG
Trigger: GCCTCCGAATGGCAGGGCTCAGACACACACACCTGG...CTTGACCACTGGGCCAGTTGGGTGGCTAGGTTGCCTCATTTTGCATCCTTCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531399.6
ENST00000602346.5
CDS-3UTR TCA 90 bp TTCAACTCCCAGAATTTCAGGATGAGGCAGCTCTGCACACAGGCCAGGCAAGCTCCCCGGCACCCTCCGTaGACTTGGGCACCCAAAACT +
Preference number: 4 (lower is better)
Translates to: FNSQNFRMRQLCTQARQAPRHPP*TWAPKT
Trigger: AGTTTTGGGTGCCCAAGTTCACGGAGGGTGCCGGGG...AGCTTGCCTGGCCTGTGTGCAGAGCTGCCTCATCCTGAAATTCTGGGAGTTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458238.6
CDS-3UTR TCA 90 bp GAAGGATGCAAAATGAGGCAACCTAGCCACCCAACTGGCCCAGTGGTCAAGGGGCTCAGACGCTGCGTGTaGGCTTCTGGGGAGAGAAGT +
Preference number: 4 (lower is better)
Translates to: EGCKMRQPSHPTGPVVKGLRRCV*ASGERS
Trigger: ACTTCTCTCCCCAGAAGCTCACACGCAGCGTCTGAG...CCCCTTGACCACTGGGCCAGTTGGGTGGCTAGGTTGCCTCATTTTGCATCCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000602346.5
CDS-3UTR GCA 90 bp AGTGCAGGTTGTGGCATCCAATGTGGGCGATTGAGGTCATGCCCACTGGGGATCTGTGTGTCTGAGCCCTaGCATTCGGAGGCATCACCG +
Preference number: 4 (lower is better)
Translates to: SAGCGIQCGRLRSCPLGICVSEP*HSEASP
Trigger: CGGTGATGCCTCCGAATGGCAGGGCTCAGACACACA...GATCCCCAGTGGGCATGACCTCAATCGCCCACATTGGATGCCACAACCTGCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458238.6
CDS-3UTR GCA 90 bp CGGAAGTGTCATGTAGACTATGGCTCAGCTGCAGCCCACCCAGGGAAGCTGGGGCCATTGGTTAAGGGTTaGCCTGGGGCTTTCAACTCC +
Preference number: 4 (lower is better)
Translates to: RKCHVDYGSAAAHPGKLGPLVKG*PGAFNS
Trigger: GGAGTTGAAAGCCCCAGGGCAACCCTTAACCAATGG...CCCCAGCTTCCCTGGGTGGGCTGCAGCTGAGCCATAGTCTACATGACACTTCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458238.6
CDS-3UTR GCA 90 bp AAGATCCAGACGAGACTGACAGAGCTTCTATTCCCCGGCACCCTCCGTGAACTTGCATGGCTGAGTTCCTaGCTGTCCTTGGCAGGCCCG +
Preference number: 4 (lower is better)
Translates to: KIQTRLTELLFPGTLRELAWLSS*LSLAGP
Trigger: CGGGCCTGCCAAGGACAGGCAGGAACTCAGCCATGC...AAGTTCACGGAGGGTGCCGGGGAATAGAAGCTCTGTCAGTCTCGTCTGGATCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527504.1
ENST00000602346.5
CDS-3UTR GCA 90 bp GAGGCCCTGCAGCGCCGTCTCTTGGATGGTTTATTCTTCTCTGGCAGGTTTTCCCAGACTGTGAGGCCCTaGAGCGCCGTCTCTTGGATG +
Preference number: 4 (lower is better)
Translates to: EALQRRLLDGLFFSGRFSQTVRP*SAVSWM
Trigger: CATCCAAGAGACGGCGCTGCAGGGCCTCACAGTCTG...GGAAAACCTGCCAGAGAAGAATAAACCATCCAAGAGACGGCGCTGCAGGGCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602346.5
CDS-3UTR GCA 90 bp TCACCACAGCTCGGGGCTTTGTCACCCCAGCACACCTGGGCCCTGCACCTCAGACATCGTTTCCATGTGTaGAGCAGAAATTGGCGTCTC +
Preference number: 4 (lower is better)
Translates to: SPQLGALSPQHTWALHLRHRFHV*SRNWRL
Trigger: GAGACGCCAATTTCTGCTGCACACATGGAAACGATG...TCTGAGGTGCAGGGCCCAGGTGTGCTGGGGTGACAAAGCCCCGAGCTGTGGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602346.5
CDS-3UTR CCA 90 bp ACAGAAGGATGCAAAATGAGGCAACCTAGCCACCCAACTGGCCCAGTGGTCAAGATCACCGAGAGGTTCTaGTCTCCCCTGCCCAGGCCC +
Preference number: 4 (lower is better)
Translates to: TEGCKMRQPSHPTGPVVKITERF*SPLPRP
Trigger: GGGCCTGGGCAGGGGAGACCAGAACCTCTCGGTGAT...CTTGACCACTGGGCCAGTTGGGTGGCTAGGTTGCCTCATTTTGCATCCTTCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000531399.6
ENST00000602346.5
CDS-3UTR CCA 90 bp CAGCCTCTCCATTTAGCTCTCACTTTCTGGATGCAGCCAGGCACCACCTTCCTTGTCTGCCCGGGGCTGTaGCAGGCAAAAGACCGTCTC +
Preference number: 4 (lower is better)
Translates to: QPLHLALTFWMQPGTTFLVCPGL*QAKDRL
Trigger: GAGACGGTCTTTTGCCTGCCACAGCCCCGGGCAGAC...AAGGAAGGTGGTGCCTGGCTGCATCCAGAAAGTGAGAGCTAAATGGAGAGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000527504.1
ENST00000602346.5
CDS-3UTR CCA 90 bp AATGAGGTGGCCGCTAGTCAGCGCTGGAGCCATTTCTCGACGGTGCTTTCTGTTGCCGCTAGTCAGCGCTaGAGCCATTTCTCGACGGTG +
Preference number: 4 (lower is better)
Translates to: NEVAASQRWSHFSTVLSVAASQR*SHFSTV
Trigger: CACCGTCGAGAAATGGCTCCAGCGCTGACTAGCGGC...AACAGAAAGCACCGTCGAGAAATGGCTCCAGCGCTGACTAGCGGCCACCTCATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531399.6
ENST00000602346.5
CDS-3UTR TCA 90 bp TGGGGCTTTCAACTCCCAGAATTTCAGGATGAGGCAGCTCTGCACACAGGCCAGCCACTGCAGGAAGCTTaGGCAGATCTGAAGCTCGCC +
Preference number: 4 (lower is better)
Translates to: WGFQLPEFQDEAALHTGQPLQEA*ADLKLA
Trigger: GGCGAGCTTCAGATCTGCTCAAGCTTCCTGCAGTGG...CTGGCCTGTGTGCAGAGCTGCCTCATCCTGAAATTCTGGGAGTTGAAAGCCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458238.6
CDS-3UTR TCA 90 bp GGATCCAGACAGTTGCTGAGGACCAAGATCCAGACGAGACTGACAGAGCTTCTACCCCGGCACCCTCCGTaGACTTGGGCACCCAAAACT +
Preference number: 4 (lower is better)
Translates to: GSRQLLRTKIQTRLTELLPRHPP*TWAPKT
Trigger: AGTTTTGGGTGCCCAAGTTCACGGAGGGTGCCGGGG...TAGAAGCTCTGTCAGTCTCGTCTGGATCTTGGTCCTCAGCAACTGTCTGGATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000527504.1
ENST00000602346.5
CDS-3UTR TCA 90 bp CCCACTGGGGATCCTCGGAAGTGTCATGTAGACTATGGCTCAGCTGCAGCCCACAGATCCAGACGAGACTaGCAGAGCTTCTATTCCCCG +
Preference number: 4 (lower is better)
Translates to: PTGDPRKCHVDYGSAAAHRSRRD*QSFYSP
Trigger: CGGGGAATAGAAGCTCTGTCAGTCTCGTCTGGATCT...GTGGGCTGCAGCTGAGCCATAGTCTACATGACACTTCCGAGGATCCCCAGTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458238.6
CDS-3UTR TCA 90 bp CCCACTGGGGATCCTCGGAAGTGTCATGTAGACTATGGCTCAGCTGCAGCCCACGATCCAGACAGTTGCTaGGGACCAAGATCCAGACGA +
Preference number: 4 (lower is better)
Translates to: PTGDPRKCHVDYGSAAAHDPDSC*GPRSRR
Trigger: TCGTCTGGATCTTGGTCCTCAGCAACTGTCTGGATC...GTGGGCTGCAGCTGAGCCATAGTCTACATGACACTTCCGAGGATCCCCAGTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458238.6
CDS-3UTR TCA 90 bp CCCATGCGCTCCACATGCGTCCTTTGTTCAGCCTCTCCATTTAGCTCTCACTTTCTTGCGGGGCATGGCTaGGTTCCTGCCTGTCCTTGG +
Preference number: 4 (lower is better)
Translates to: PMRSTCVLCSASPFSSHFLAGHG*VPACPW
Trigger: CCAAGGACAGGCAGGAACTCAGCCATGCCCCGCAAG...AAAGTGAGAGCTAAATGGAGAGGCTGAACAAAGGACGCATGTGGAGCGCATGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527504.1
ENST00000602346.5
CDS-3UTR TCA 90 bp CCTCTCCATTTAGCTCTCACTTTCTGGATGCAGCCAGGCACCACCTTCCTTCCAGTCCGCATGCAGCTCTaGGGACCCAGATGCTGTCAC +
Preference number: 4 (lower is better)
Translates to: PLHLALTFWMQPGTTFLPVRMQL*GPRCCH
Trigger: GTGACAGCATCTGGGTCCTCAGAGCTGCATGCGGAC...TGGAAGGAAGGTGGTGCCTGGCTGCATCCAGAAAGTGAGAGCTAAATGGAGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527504.1
ENST00000602346.5
CDS-3UTR TCA 90 bp GAAGCAGACTGTGAGGCCCTGCAGCGCCGTCTCTTGGATGGTTTATTCTTCTCTGTCCGCATGCAGCTCTaGGGACCCAGATGCTGTCAC +
Preference number: 4 (lower is better)
Translates to: EADCEALQRRLLDGLFFSVRMQL*GPRCCH
Trigger: GTGACAGCATCTGGGTCCTCAGAGCTGCATGCGGAC...AGAGAAGAATAAACCATCCAAGAGACGGCGCTGCAGGGCCTCACAGTCTGCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602346.5
CDS-3UTR GCA 90 bp GTTGCTGAGGACCAAGATCCAGACGAGACTGACAGAGCTTCTATTCCCCGGCACAGCCTTCCCTCCCCATaGGCTCCACATGCGTCCTTT +
Preference number: 4 (lower is better)
Translates to: VAEDQDPDETDRASIPRHSLPSP*APHASF
Trigger: AAAGGACGCATGTGGAGCGCATGGGGAGGGAAGGCT...GTGCCGGGGAATAGAAGCTCTGTCAGTCTCGTCTGGATCTTGGTCCTCAGCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000527504.1
ENST00000602346.5
CDS-3UTR GCA 90 bp GATCTGAAACCTCAGCAAAGTGATGACGCTGCCACTCAGGTTCCCATGGAAACCCTGCTTCCGGAGCCATaGGCTGCCTGTGCTGGGATG +
Preference number: 4 (lower is better)
Translates to: DLKPQQSDDAATQVPMETLLPEP*AACAGM
Trigger: CATCCCAGCACAGGCAGCGCATGGCTCCGGAAGCAG...GGTTTCCATGGGAACCTGAGTGGCAGCGTCATCACTTTGCTGAGGTTTCAGATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527504.1
CDS-3UTR CCA 90 bp AGTGCAGGTTGTGGCATCCAATGTGGGCGATTGAGGTCATGCCCACTGGGGATCGAGGGTCCGTGGAAATaGTCTCCTCCTGCACATCTG +
Preference number: 4 (lower is better)
Translates to: SAGCGIQCGRLRSCPLGIEGPWK*SPPAHL
Trigger: CAGATGTGCAGGAGGAGACCATTTCCACGGACCCTC...GATCCCCAGTGGGCATGACCTCAATCGCCCACATTGGATGCCACAACCTGCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458238.6
CDS-3UTR CCA 90 bp GAAGGATGCAAAATGAGGCAACCTAGCCACCCAACTGGCCCAGTGGTCAAGGGGGAGGGTCCGTGGAAATaGTCTCCTCCTGCACATCTG +
Preference number: 4 (lower is better)
Translates to: EGCKMRQPSHPTGPVVKGEGPWK*SPPAHL
Trigger: CAGATGTGCAGGAGGAGACCATTTCCACGGACCCTC...CCCCTTGACCACTGGGCCAGTTGGGTGGCTAGGTTGCCTCATTTTGCATCCTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000531399.6
ENST00000602346.5
CDS-3UTR CCA 90 bp TGCCCTGGGGCTTTCAACTCCCAGAATTTCAGGATGAGGCAGCTCTGCACACAGGAGTCGGAGGGTCCGTaGAAATGGTCTCCTCCTGCA +
Preference number: 4 (lower is better)
Translates to: CPGAFNSQNFRMRQLCTQESEGP*KWSPPA
Trigger: TGCAGGAGGAGACCATTTCCACGGACCCTCCGACTC...CTGTGTGCAGAGCTGCCTCATCCTGAAATTCTGGGAGTTGAAAGCCCCAGGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458238.6
CDS-3UTR CCA 90 bp TTTAGCTCTCACTTTCTGGATGCAGCCAGGCACCACCTTCCTTCCAAAAGCCTTTTGGCAGGCCCGCAGTaGTGGGGTGGCTCAGGCAGT +
Preference number: 4 (lower is better)
Translates to: FSSHFLDAARHHLPSKSLLAGPQ*WGGSGS
Trigger: ACTGCCTGAGCCACCCCACCACTGCGGGCCTGCCAA...AAGGCTTTTGGAAGGAAGGTGGTGCCTGGCTGCATCCAGAAAGTGAGAGCTAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000527504.1
ENST00000602346.5
CDS-3UTR CCA 90 bp GGATCCAGACAGTTGCTGAGGACCAAGATCCAGACGAGACTGACAGAGCTTCTAAGCGAGCCCATAGGCTaGGGAGCCGTCCCTGGAGAT +
Preference number: 4 (lower is better)
Translates to: GSRQLLRTKIQTRLTELLSEPIG*GAVPGD
Trigger: ATCTCCAGGGACGGCTCCCCAGCCTATGGGCTCGCT...TAGAAGCTCTGTCAGTCTCGTCTGGATCTTGGTCCTCAGCAACTGTCTGGATCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527504.1
ENST00000602346.5
CDS-3UTR CCA 90 bp AAGATCCAGACGAGACTGACAGAGCTTCTATTCCCCGGCACCCTCCGTGAACTTGCTCCGAGGCCCATCTaGACAAAAGCAGGATCCGGG +
Preference number: 4 (lower is better)
Translates to: KIQTRLTELLFPGTLRELAPRPI*TKAGSG
Trigger: CCCGGATCCTGCTTTTGTCCAGATGGGCCTCGGAGC...AAGTTCACGGAGGGTGCCGGGGAATAGAAGCTCTGTCAGTCTCGTCTGGATCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000527504.1
ENST00000602346.5
CDS-3UTR CCA 90 bp TGCGCTGCCTGTGCTGGGATGAATGCATGGCCCCTGCATCCTTACCCCCTCCTCTGCAGCGCCGTCTCTTaGATGGTTTATTCTTCTCTG +
Preference number: 4 (lower is better)
Translates to: CAACAGMNAWPLHPYPLLCSAVS*MVYSSL
Trigger: CAGAGAAGAATAAACCATCCAAGAGACGGCGCTGCA...GAGGAGGGGGTAAGGATGCAGGGGCCATGCATTCATCCCAGCACAGGCAGCGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000602346.5
CDS-3UTR CCA 90 bp GCACCTCAGACGCTGCGTGTGAGCTTCTGGGGAGAGAAGTGTGGGCCTCCAGGGCCCTATGTCGTTACCTaGATTTATCGAGAGGACATC +
Preference number: 4 (lower is better)
Translates to: APQTLRVSFWGEKCGPPGPYVVT*IYREDI
Trigger: GATGTCCTCTCGATAAATCCAGGTAACGACATAGGG...CCCTGGAGGCCCACACTTCTCTCCCCAGAAGCTCACACGCAGCGTCTGAGGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602346.5
CDS-3UTR CCA 90 bp CAGCCTCTCCATTTAGCTCTCACTTTCTGGATGCAGCCAGGCACCACCTTCCTTGCCGCTAGTCAGCGCTaGAGCCATTTCTCGACGGTG +
Preference number: 4 (lower is better)
Translates to: QPLHLALTFWMQPGTTFLAASQR*SHFSTV
Trigger: CACCGTCGAGAAATGGCTCCAGCGCTGACTAGCGGC...AAGGAAGGTGGTGCCTGGCTGCATCCAGAAAGTGAGAGCTAAATGGAGAGGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602346.5
3UTR CAA 72 bp AAAGCCAGTGCAGGTTGTGGCATCCAATGTGGGCGATaGAGGTCATGCCCACTGGGGATCCTCGGAAGTGTC +
Preference number: 4 (lower is better)
Translates to: KASAGCGIQCGR*RSCPLGILGSV
Trigger: GACACTTCCGAGGATCCCCAGTGGGCATGACCTCAATCGCCCACATTGGATGCCACAACCTGCACTGGCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458238.6
CDS-3UTR TCA 90 bp AGATTTGGGGATACAGAAGGATGCAAAATGAGGCAACCTAGCCACCCAACTGGCCCCCGGCACCCTCCGTaGACTTGGGCACCCAAAACT +
Preference number: 4 (lower is better)
Translates to: RFGDTEGCKMRQPSHPTGPRHPP*TWAPKT
Trigger: AGTTTTGGGTGCCCAAGTTCACGGAGGGTGCCGGGG...GCCAGTTGGGTGGCTAGGTTGCCTCATTTTGCATCCTTCTGTATCCCCAAATCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000531399.6
ENST00000602346.5
CDS-3UTR TCA 90 bp GGATCCAGACAGTTGCTGAGGACCAAGATCCAGACGAGACTGACAGAGCTTCTACTGCCTGTGCTGGGATaGATGCATGGCCCCTGCATC +
Preference number: 4 (lower is better)
Translates to: GSRQLLRTKIQTRLTELLLPVLG*MHGPCI
Trigger: GATGCAGGGGCCATGCATTCATCCCAGCACAGGCAG...TAGAAGCTCTGTCAGTCTCGTCTGGATCTTGGTCCTCAGCAACTGTCTGGATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527504.1
ENST00000602346.5
CDS-3UTR GCA 90 bp TTGCCCTGGGGCTTTCAACTCCCAGAATTTCAGGATGAGGCAGCTCTGCACACACCTGCACATCTGTGCTaGTGTGACTGGGTGCAGGTC +
Preference number: 4 (lower is better)
Translates to: LPWGFQLPEFQDEAALHTPAHLC*CDWVQV
Trigger: GACCTGCACCCAGTCACAGCAGCACAGATGTGCAGG...TGTGTGCAGAGCTGCCTCATCCTGAAATTCTGGGAGTTGAAAGCCCCAGGGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458238.6
CDS-3UTR GCA 90 bp CCTCTCCATTTAGCTCTCACTTTCTGGATGCAGCCAGGCACCACCTTCCTTCCACCTGCACATCTGTGCTaGTGTGACTGGGTGCAGGTC +
Preference number: 4 (lower is better)
Translates to: PLHLALTFWMQPGTTFLPPAHLC*CDWVQV
Trigger: GACCTGCACCCAGTCACAGCAGCACAGATGTGCAGG...TGGAAGGAAGGTGGTGCCTGGCTGCATCCAGAAAGTGAGAGCTAAATGGAGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527504.1
ENST00000602346.5
CDS-3UTR GCA 90 bp CCCACTGGGGATCCTCGGAAGTGTCATGTAGACTATGGCTCAGCTGCAGCCCACCAGGCAAGCTCTTACTaGACTGTCAGGATCCAGACA +
Preference number: 4 (lower is better)
Translates to: PTGDPRKCHVDYGSAAAHQASSY*TVRIQT
Trigger: TGTCTGGATCCTGACAGTGCAGTAAGAGCTTGCCTG...GTGGGCTGCAGCTGAGCCATAGTCTACATGACACTTCCGAGGATCCCCAGTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458238.6
CDS-3UTR GCA 90 bp CAGCCTCTCCATTTAGCTCTCACTTTCTGGATGCAGCCAGGCACCACCTTCCTTTGGGGACAGTCCGCATaGAGCTCTGAGGACCCAGAT +
Preference number: 4 (lower is better)
Translates to: QPLHLALTFWMQPGTTFLWGQSA*SSEDPD
Trigger: ATCTGGGTCCTCAGAGCTGCATGCGGACTGTCCCCA...AAGGAAGGTGGTGCCTGGCTGCATCCAGAAAGTGAGAGCTAAATGGAGAGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527504.1
ENST00000602346.5
CDS-3UTR GCA 90 bp GTTCAGCCTCTCCATTTAGCTCTCACTTTCTGGATGCAGCCAGGCACCACCTTCTGGGGACAGTCCGCATaGAGCTCTGAGGACCCAGAT +
Preference number: 4 (lower is better)
Translates to: VQPLHLALTFWMQPGTTFWGQSA*SSEDPD
Trigger: ATCTGGGTCCTCAGAGCTGCATGCGGACTGTCCCCA...GAAGGTGGTGCCTGGCTGCATCCAGAAAGTGAGAGCTAAATGGAGAGGCTGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527504.1
ENST00000602346.5
CDS-3UTR GCA 90 bp AATGAGGTGGCCGCTAGTCAGCGCTGGAGCCATTTCTCGACGGTGCTTTCTGTTCGCAGCCTGGCTCCATaGTCTCAACAGCTTTGCAGA +
Preference number: 4 (lower is better)
Translates to: NEVAASQRWSHFSTVLSVRSLAP*SQQLCR
Trigger: TCTGCAAAGCTGTTGAGAGCATGGAGCCAGGCTGCG...AACAGAAAGCACCGTCGAGAAATGGCTCCAGCGCTGACTAGCGGCCACCTCATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602346.5
CDS-3UTR CCA 90 bp TTTAGCTCTCACTTTCTGGATGCAGCCAGGCACCACCTTCCTTCCAAAAGCCTTATCACCGAGAGGTTCTaGTCTCCCCTGCCCAGGCCC +
Preference number: 4 (lower is better)
Translates to: FSSHFLDAARHHLPSKSLITERF*SPLPRP
Trigger: GGGCCTGGGCAGGGGAGACCAGAACCTCTCGGTGAT...AAGGCTTTTGGAAGGAAGGTGGTGCCTGGCTGCATCCAGAAAGTGAGAGCTAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000527504.1
ENST00000602346.5
CDS-3UTR CCA 90 bp GAAGGATGCAAAATGAGGCAACCTAGCCACCCAACTGGCCCAGTGGTCAAGGGGGTGAGTCTGAAAACTTaGGATGTCGGCACCACGGTG +
Preference number: 4 (lower is better)
Translates to: EGCKMRQPSHPTGPVVKGVSLKT*DVGTTV
Trigger: CACCGTGGTGCCGACATCCCAAGTTTTCAGACTCAC...CCCCTTGACCACTGGGCCAGTTGGGTGGCTAGGTTGCCTCATTTTGCATCCTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000602346.5
CDS-3UTR CCA 90 bp GAGGTGGCCGCTAGTCAGCGCTGGAGCCATTTCTCGACGGTGCTTTCTGTTTGTCCCAGATGCTGTCACTaGGTCCTGGTGAGTCTGAAA +
Preference number: 4 (lower is better)
Translates to: EVAASQRWSHFSTVLSVCPRCCH*VLVSLK
Trigger: TTTCAGACTCACCAGGACCCAGTGACAGCATCTGGG...ACAAACAGAAAGCACCGTCGAGAAATGGCTCCAGCGCTGACTAGCGGCCACCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602346.5
CDS-3UTR CCA 90 bp TCTGGACAAAAGCAGGATCCGGGGTGGACGCAGAAGAGCAGGCCCGGAGCCCTGCGTCATCTTCATTATTaGCCACAGGAAACGACTTCT +
Preference number: 4 (lower is better)
Translates to: SGQKQDPGWTQKSRPGALRHLHY*PQETTS
Trigger: AGAAGTCGTTTCCTGTGGCCAATAATGAAGATGACG...CAGGGCTCCGGGCCTGCTCTTCTGCGTCCACCCCGGATCCTGCTTTTGTCCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000527504.1
ENST00000602346.5
CDS-3UTR TCA 90 bp AATGAGGTGGCCGCTAGTCAGCGCTGGAGCCATTTCTCGACGGTGCTTTCTGTTAAGCTTGAGCAGATCTaGAGCTCGCCTCAGAGGAAG +
Preference number: 4 (lower is better)
Translates to: NEVAASQRWSHFSTVLSVKLEQI*SSPQRK
Trigger: CTTCCTCTGAGGCGAGCTTCAGATCTGCTCAAGCTT...AACAGAAAGCACCGTCGAGAAATGGCTCCAGCGCTGACTAGCGGCCACCTCATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531399.6
ENST00000602346.5
CDS-3UTR TCA 90 bp TGCGTCATCTTCATTATTGGCCACAGGAAACGACTTCTTGGAGTAAGTGACTGGATGTCGGCACCACGGTaGGAGCAGAGTCTGCCCGGG +
Preference number: 4 (lower is better)
Translates to: CVIFIIGHRKRLLGVSDWMSAPR*EQSLPG
Trigger: CCCGGGCAGACTCTGCTCTCACCGTGGTGCCGACAT...CCAGTCACTTACTCCAAGAAGTCGTTTCCTGTGGCCAATAATGAAGATGACGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527504.1
ENST00000602346.5
CDS-3UTR TCA 90 bp AAGATCCAGACGAGACTGACAGAGCTTCTATTCCCCGGCACCCTCCGTGAACTTCTCTGTCCAATGCTCTaGACTGGGGACAGTCCGCAT +
Preference number: 4 (lower is better)
Translates to: KIQTRLTELLFPGTLRELLCPML*TGDSPH
Trigger: ATGCGGACTGTCCCCAGTTCAGAGCATTGGACAGAG...AAGTTCACGGAGGGTGCCGGGGAATAGAAGCTCTGTCAGTCTCGTCTGGATCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000527504.1
ENST00000602346.5
CDS-3UTR TCA 90 bp GAGGCCCTGCAGCGCCGTCTCTTGGATGGTTTATTCTTCTCTGGCAGGTTTTCCTCCTCTTGGGACTATTaGTCAGGGCTGTCAGTTCCC +
Preference number: 4 (lower is better)
Translates to: EALQRRLLDGLFFSGRFSSSWDY*SGLSVP
Trigger: GGGAACTGACAGCCCTGATCAATAGTCCCAAGAGGA...GGAAAACCTGCCAGAGAAGAATAAACCATCCAAGAGACGGCGCTGCAGGGCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602346.5
CDS-3UTR TCA 90 bp CAGCCTCTCCATTTAGCTCTCACTTTCTGGATGCAGCCAGGCACCACCTTCCTTACTTCTTGGAGTAAGTaGCTGGTGCTCCGAGGCCCA +
Preference number: 4 (lower is better)
Translates to: QPLHLALTFWMQPGTTFLTSWSK*LVLRGP
Trigger: TGGGCCTCGGAGCACCAGTCACTTACTCCAAGAAGT...AAGGAAGGTGGTGCCTGGCTGCATCCAGAAAGTGAGAGCTAAATGGAGAGGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527504.1
ENST00000602346.5
CDS-3UTR TCA 90 bp GGGGGAAATGAGGTGGCCGCTAGTCAGCGCTGGAGCCATTTCTCGACGGTGCTTTTTTCTGATCATAGCTaGGCTCAAATGCTGACCCCA +
Preference number: 4 (lower is better)
Translates to: GGNEVAASQRWSHFSTVLFSDHS*AQMLTP
Trigger: TGGGGTCAGCATTTGAGCTCAGCTATGATCAGAAAA...AAGCACCGTCGAGAAATGGCTCCAGCGCTGACTAGCGGCCACCTCATTTCCCCC
54% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000531399.6
ENST00000602346.5
CDS-3UTR TCA 90 bp GAGGTGGCCGCTAGTCAGCGCTGGAGCCATTTCTCGACGGTGCTTTCTGTTTGTCAGAAGGATGCAAAATaGGGCAACCTAGCCACCCAA +
Preference number: 4 (lower is better)
Translates to: EVAASQRWSHFSTVLSVCQKDAK*GNLATQ
Trigger: TTGGGTGGCTAGGTTGCCTCATTTTGCATCCTTCTG...ACAAACAGAAAGCACCGTCGAGAAATGGCTCCAGCGCTGACTAGCGGCCACCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531399.6
ENST00000602346.5
CDS-3UTR GCA 90 bp AGACAGTTGCTGAGGACCAAGATCCAGACGAGACTGACAGAGCTTCTATTCCCCCCTGCACATCTGTGCTaGTGTGACTGGGTGCAGGTC +
Preference number: 4 (lower is better)
Translates to: RQLLRTKIQTRLTELLFPPAHLC*CDWVQV
Trigger: GACCTGCACCCAGTCACAGCAGCACAGATGTGCAGG...GGGGAATAGAAGCTCTGTCAGTCTCGTCTGGATCTTGGTCCTCAGCAACTGTCT
54% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000527504.1
ENST00000602346.5
CDS-3UTR GCA 90 bp TGCGTCATCTTCATTATTGGCCACAGGAAACGACTTCTTGGAGTAAGTGACTGGTGCCCCTGGGCTCCTTaGGGGGCATGGCTGAGTTCC +
Preference number: 4 (lower is better)
Translates to: CVIFIIGHRKRLLGVSDWCPWAP*GAWLSS
Trigger: GGAACTCAGCCATGCCCCGCAAGGAGCCCAGGGGCA...CCAGTCACTTACTCCAAGAAGTCGTTTCCTGTGGCCAATAATGAAGATGACGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000527504.1
ENST00000602346.5
CDS-3UTR GCA 90 bp TGCGTCATCTTCATTATTGGCCACAGGAAACGACTTCTTGGAGTAAGTGACTGGGGTGAGAGCAGAGTCTaGCCGGGGCTGTGGCAGGCA +
Preference number: 4 (lower is better)
Translates to: CVIFIIGHRKRLLGVSDWGESRV*PGLWQA
Trigger: TGCCTGCCACAGCCCCGGGCAGACTCTGCTCTCACC...CCAGTCACTTACTCCAAGAAGTCGTTTCCTGTGGCCAATAATGAAGATGACGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000527504.1
ENST00000602346.5
CDS-3UTR GCA 90 bp TACATCCACAGCAGTTTACAACTCTGCCATGATGTCATTTTGTCAGATGGCAAAGCAGGCCCGGAGCCCTaGACCCCAGCCTTCCCTCCC +
Preference number: 4 (lower is better)
Translates to: YIHSSLQLCHDVILSDGKAGPEP*TPAFPP
Trigger: GGGAGGGAAGGCTGGGGTGCAGGGCTCCGGGCCTGC...TTTGCCATCTGACAAAATGACATCATGGCAGAGTTGTAAACTGCTGTGGATGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602346.5
CDS-3UTR GCA 90 bp TCCACATGCGTCCTTTGTTCAGCCTCTCCATTTAGCTCTCACTTTCTGGATGCAAGCACACCTGGGCCCTaGACCTCAGACGCTGCGTGT +
Preference number: 4 (lower is better)
Translates to: STCVLCSASPFSSHFLDASTPGP*TSDAAC
Trigger: ACACGCAGCGTCTGAGGTGCAGGGCCCAGGTGTGCT...TGCATCCAGAAAGTGAGAGCTAAATGGAGAGGCTGAACAAAGGACGCATGTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527504.1
ENST00000602346.5
CDS-3UTR GCA 90 bp GCCTGTGCTGGGATGAATGCATGGCCCCTGCATCCTTACCCCCTCCTCAGAGCCGTTGGAATGGAAGACTaGTCATTCCAAATCTGTCCT +
Preference number: 4 (lower is better)
Translates to: ACAGMNAWPLHPYPLLRAVGMED*SFQICP
Trigger: AGGACAGATTTGGAATGAGCAGTCTTCCATTCCAAC...GGCTCTGAGGAGGGGGTAAGGATGCAGGGGCCATGCATTCATCCCAGCACAGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000602346.5
CDS-3UTR CCA 90 bp TTGCCCTGGGGCTTTCAACTCCCAGAATTTCAGGATGAGGCAGCTCTGCACACAGTGTCATGTAGACTATaGCTCAGCTGCAGCCCACCC +
Preference number: 4 (lower is better)
Translates to: LPWGFQLPEFQDEAALHTVSCRL*LSCSPP
Trigger: GGGTGGGCTGCAGCTGAGCCATAGTCTACATGACAC...TGTGTGCAGAGCTGCCTCATCCTGAAATTCTGGGAGTTGAAAGCCCCAGGGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458238.6
CDS-3UTR CCA 90 bp TCCACATGCGTCCTTTGTTCAGCCTCTCCATTTAGCTCTCACTTTCTGGATGCAGTCTGCCCGGGGCTGTaGCAGGCAAAAGACCGTCTC +
Preference number: 4 (lower is better)
Translates to: STCVLCSASPFSSHFLDAVCPGL*QAKDRL
Trigger: GAGACGGTCTTTTGCCTGCCACAGCCCCGGGCAGAC...TGCATCCAGAAAGTGAGAGCTAAATGGAGAGGCTGAACAAAGGACGCATGTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000527504.1
ENST00000602346.5
CDS-3UTR CCA 90 bp CTCCTCAGAGCCCACAAGCTTCCGAGTGCGTCATCTTCATTATTGGCCACAGGACTTGGAGTAAGTGACTaGTGCTCCGAGGCCCATCTG +
Preference number: 4 (lower is better)
Translates to: LLRAHKLPSASSSLLATGLGVSD*CSEAHL
Trigger: CAGATGGGCCTCGGAGCACCAGTCACTTACTCCAAG...TCCTGTGGCCAATAATGAAGATGACGCACTCGGAAGCTTGTGGGCTCTGAGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527504.1
ENST00000602346.5
CDS-3UTR CCA 90 bp CCGCAGCCTGGCTCCATGCTCTCAACAGCTTTGCAGAAACTAAAGTTGGAATGGGCTGGGATGAATGCATaGCCCCTGCATCCTTACCCC +
Preference number: 4 (lower is better)
Translates to: PQPGSMLSTALQKLKLEWAGMNA*PLHPYP
Trigger: GGGGTAAGGATGCAGGGGCCATGCATTCATCCCAGC...CCATTCCAACTTTAGTTTCTGCAAAGCTGTTGAGAGCATGGAGCCAGGCTGCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602346.5
CDS-3UTR TCA 90 bp AAGATCCAGACGAGACTGACAGAGCTTCTATTCCCCGGCACCCTCCGTGAACTTAAGCTTGAGCAGATCTaGAGCTCGCCTCAGAGGAAG +
Preference number: 4 (lower is better)
Translates to: KIQTRLTELLFPGTLRELKLEQI*SSPQRK
Trigger: CTTCCTCTGAGGCGAGCTTCAGATCTGCTCAAGCTT...AAGTTCACGGAGGGTGCCGGGGAATAGAAGCTCTGTCAGTCTCGTCTGGATCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527504.1
ENST00000602346.5
CDS-3UTR TCA 90 bp CTCCTCAGAGCCCACAAGCTTCCGAGTGCGTCATCTTCATTATTGGCCACAGGAAGATCCAGACGAGACTaGCAGAGCTTCTATTCCCCG +
Preference number: 4 (lower is better)
Translates to: LLRAHKLPSASSSLLATGRSRRD*QSFYSP
Trigger: CGGGGAATAGAAGCTCTGTCAGTCTCGTCTGGATCT...TCCTGTGGCCAATAATGAAGATGACGCACTCGGAAGCTTGTGGGCTCTGAGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527504.1
ENST00000602346.5
CDS-3UTR TCA 90 bp TGTTCAGCCTCTCCATTTAGCTCTCACTTTCTGGATGCAGCCAGGCACCACCTTCTCTGTCCAATGCTCTaGACTGGGGACAGTCCGCAT +
Preference number: 4 (lower is better)
Translates to: CSASPFSSHFLDAARHHLLCPML*TGDSPH
Trigger: ATGCGGACTGTCCCCAGTTCAGAGCATTGGACAGAG...AAGGTGGTGCCTGGCTGCATCCAGAAAGTGAGAGCTAAATGGAGAGGCTGAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527504.1
ENST00000602346.5
CDS-3UTR TCA 90 bp GGGGATACAGAAGGATGCAAAATGAGGCAACCTAGCCACCCAACTGGCCCAGTGCAGAAGGATGCAAAATaGGGCAACCTAGCCACCCAA +
Preference number: 4 (lower is better)
Translates to: GDTEGCKMRQPSHPTGPVQKDAK*GNLATQ
Trigger: TTGGGTGGCTAGGTTGCCTCATTTTGCATCCTTCTG...CACTGGGCCAGTTGGGTGGCTAGGTTGCCTCATTTTGCATCCTTCTGTATCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000531399.6
ENST00000602346.5
CDS-3UTR GCA 90 bp GGGAGAAAAGCCAGTGCAGGTTGTGGCATCCAATGTGGGCGATTGAGGTCATGCAGGGAGAAAAGCCAGTaGAGGTTGTGGCATCCAATG +
Preference number: 4 (lower is better)
Translates to: GRKASAGCGIQCGRLRSCREKSQ*RLWHPM
Trigger: CATTGGATGCCACAACCTGCACTGGCTTTTCTCCCT...GCATGACCTCAATCGCCCACATTGGATGCCACAACCTGCACTGGCTTTTCTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458238.6
CDS-3UTR GCA 90 bp TTTAGCTCTCACTTTCTGGATGCAGCCAGGCACCACCTTCCTTCCAAAAGCCTTAGCCTTCCCTCCCCATaGGCTCCACATGCGTCCTTT +
Preference number: 4 (lower is better)
Translates to: FSSHFLDAARHHLPSKSLSLPSP*APHASF
Trigger: AAAGGACGCATGTGGAGCGCATGGGGAGGGAAGGCT...AAGGCTTTTGGAAGGAAGGTGGTGCCTGGCTGCATCCAGAAAGTGAGAGCTAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000527504.1
ENST00000602346.5
CDS-3UTR GCA 90 bp GAAGGATGCAAAATGAGGCAACCTAGCCACCCAACTGGCCCAGTGGTCAAGGGGCCACAAGCTTCCGAGTaGGTCATCTTCATTATTGGC +
Preference number: 4 (lower is better)
Translates to: EGCKMRQPSHPTGPVVKGPQASE*VIFIIG
Trigger: GCCAATAATGAAGATGACGCACTCGGAAGCTTGTGG...CCCCTTGACCACTGGGCCAGTTGGGTGGCTAGGTTGCCTCATTTTGCATCCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602346.5
CDS-3UTR GCA 90 bp CTCCTCAGAGCCCACAAGCTTCCGAGTGCGTCATCTTCATTATTGGCCACAGGACTGTGCTGGGATGAATaGATGGCCCCTGCATCCTTA +
Preference number: 4 (lower is better)
Translates to: LLRAHKLPSASSSLLATGLCWDE*MAPASL
Trigger: TAAGGATGCAGGGGCCATGCATTCATCCCAGCACAG...TCCTGTGGCCAATAATGAAGATGACGCACTCGGAAGCTTGTGGGCTCTGAGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527504.1
ENST00000602346.5
CDS-3UTR GCA 90 bp CAGCCTCTCCATTTAGCTCTCACTTTCTGGATGCAGCCAGGCACCACCTTCCTTCTGTGCTGGGATGAATaGATGGCCCCTGCATCCTTA +
Preference number: 4 (lower is better)
Translates to: QPLHLALTFWMQPGTTFLLCWDE*MAPASL
Trigger: TAAGGATGCAGGGGCCATGCATTCATCCCAGCACAG...AAGGAAGGTGGTGCCTGGCTGCATCCAGAAAGTGAGAGCTAAATGGAGAGGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527504.1
ENST00000602346.5
CDS-3UTR GCA 90 bp TTCCGAGTGCGTCATCTTCATTATTGGCCACAGGAAACGACTTCTTGGAGTAAGCTGCTTCCGGAGCCATaGGCTGCCTGTGCTGGGATG +
Preference number: 4 (lower is better)
Translates to: FRVRHLHYWPQETTSWSKLLPEP*AACAGM
Trigger: CATCCCAGCACAGGCAGCGCATGGCTCCGGAAGCAG...CTTACTCCAAGAAGTCGTTTCCTGTGGCCAATAATGAAGATGACGCACTCGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527504.1
ENST00000602346.5
CDS-3UTR GCA 90 bp GAAGGATGCAAAATGAGGCAACCTAGCCACCCAACTGGCCCAGTGGTCAAGGGGGGGGATACAGAAGGATaGAAAATGAGGCAACCTAGC +
Preference number: 4 (lower is better)
Translates to: EGCKMRQPSHPTGPVVKGGDTEG*KMRQPS
Trigger: GCTAGGTTGCCTCATTTTGCATCCTTCTGTATCCCC...CCCCTTGACCACTGGGCCAGTTGGGTGGCTAGGTTGCCTCATTTTGCATCCTTC
53% GC, longest homopolymer 8 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000531399.6
ENST00000602346.5
CDS-3UTR CCA 90 bp AGACAGTTGCTGAGGACCAAGATCCAGACGAGACTGACAGAGCTTCTATTCCCCGAGGGTCCGTGGAAATaGTCTCCTCCTGCACATCTG +
Preference number: 4 (lower is better)
Translates to: RQLLRTKIQTRLTELLFPEGPWK*SPPAHL
Trigger: CAGATGTGCAGGAGGAGACCATTTCCACGGACCCTC...GGGGAATAGAAGCTCTGTCAGTCTCGTCTGGATCTTGGTCCTCAGCAACTGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527504.1
ENST00000602346.5
CDS-3UTR CCA 90 bp CCGCAGCCTGGCTCCATGCTCTCAACAGCTTTGCAGAAACTAAAGTTGGAATGGGAGGGTCCGTGGAAATaGTCTCCTCCTGCACATCTG +
Preference number: 4 (lower is better)
Translates to: PQPGSMLSTALQKLKLEWEGPWK*SPPAHL
Trigger: CAGATGTGCAGGAGGAGACCATTTCCACGGACCCTC...CCATTCCAACTTTAGTTTCTGCAAAGCTGTTGAGAGCATGGAGCCAGGCTGCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602346.5
CDS-3UTR CCA 90 bp TTCAACTCCCAGAATTTCAGGATGAGGCAGCTCTGCACACAGGCCAGGCAAGCTATGCTTTTCCCCCATTaGTTAAGGGTTGCCCTGGGG +
Preference number: 4 (lower is better)
Translates to: FNSQNFRMRQLCTQARQAMLFPH*LRVALG
Trigger: CCCCAGGGCAACCCTTAACCAATGGGGGAAAAGCAT...AGCTTGCCTGGCCTGTGTGCAGAGCTGCCTCATCCTGAAATTCTGGGAGTTGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000458238.6
CDS-3UTR CCA 90 bp TTCCGAGTGCGTCATCTTCATTATTGGCCACAGGAAACGACTTCTTGGAGTAAGGCTCCTTGCGGGGCATaGCTGAGTTCCTGCCTGTCC +
Preference number: 4 (lower is better)
Translates to: FRVRHLHYWPQETTSWSKAPCGA*LSSCLS
Trigger: GGACAGGCAGGAACTCAGCCATGCCCCGCAAGGAGC...CTTACTCCAAGAAGTCGTTTCCTGTGGCCAATAATGAAGATGACGCACTCGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527504.1
ENST00000602346.5
CDS-3UTR CCA 90 bp TTCCGAGTGCGTCATCTTCATTATTGGCCACAGGAAACGACTTCTTGGAGTAAGAGCGAGCCCATAGGCTaGGGAGCCGTCCCTGGAGAT +
Preference number: 4 (lower is better)
Translates to: FRVRHLHYWPQETTSWSKSEPIG*GAVPGD
Trigger: ATCTCCAGGGACGGCTCCCCAGCCTATGGGCTCGCT...CTTACTCCAAGAAGTCGTTTCCTGTGGCCAATAATGAAGATGACGCACTCGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527504.1
ENST00000602346.5
CDS-3UTR CCA 90 bp CTCCTCAGAGCCCACAAGCTTCCGAGTGCGTCATCTTCATTATTGGCCACAGGATTAGCTCTCACTTTCTaGATGCAGCCAGGCACCACC +
Preference number: 4 (lower is better)
Translates to: LLRAHKLPSASSSLLATGLALTF*MQPGTT
Trigger: GGTGGTGCCTGGCTGCATCCAGAAAGTGAGAGCTAA...TCCTGTGGCCAATAATGAAGATGACGCACTCGGAAGCTTGTGGGCTCTGAGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527504.1
ENST00000602346.5
CDS-3UTR CCA 90 bp CAGCCTCTCCATTTAGCTCTCACTTTCTGGATGCAGCCAGGCACCACCTTCCTTTTAGCTCTCACTTTCTaGATGCAGCCAGGCACCACC +
Preference number: 4 (lower is better)
Translates to: QPLHLALTFWMQPGTTFLLALTF*MQPGTT
Trigger: GGTGGTGCCTGGCTGCATCCAGAAAGTGAGAGCTAA...AAGGAAGGTGGTGCCTGGCTGCATCCAGAAAGTGAGAGCTAAATGGAGAGGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527504.1
ENST00000602346.5
CDS-3UTR CCA 90 bp TGCGTCATCTTCATTATTGGCCACAGGAAACGACTTCTTGGAGTAAGTGACTGGAAGCAGGATCCGGGGTaGACGCAGAAGAGCAGGCCC +
Preference number: 4 (lower is better)
Translates to: CVIFIIGHRKRLLGVSDWKQDPG*TQKSRP
Trigger: GGGCCTGCTCTTCTGCGTCCACCCCGGATCCTGCTT...CCAGTCACTTACTCCAAGAAGTCGTTTCCTGTGGCCAATAATGAAGATGACGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527504.1
ENST00000602346.5
CDS-3UTR CCA 90 bp TTCCGAGTGCGTCATCTTCATTATTGGCCACAGGAAACGACTTCTTGGAGTAAGAGGTGTAGGCGCTCCTaGCTCCTGGCAGACTCCTGG +
Preference number: 4 (lower is better)
Translates to: FRVRHLHYWPQETTSWSKRCRRS*LLADSW
Trigger: CCAGGAGTCTGCCAGGAGCCAGGAGCGCCTACACCT...CTTACTCCAAGAAGTCGTTTCCTGTGGCCAATAATGAAGATGACGCACTCGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527504.1
ENST00000602346.5
CDS-3UTR CCA 90 bp CTGGACAAAAGCAGGATCCGGGGTGGACGCAGAAGAGCAGGCCCGGAGCCCTGCAAACTAAAGTTGGAATaGAAGACTGCTCATTCCAAA +
Preference number: 4 (lower is better)
Translates to: LDKSRIRGGRRRAGPEPCKLKLE*KTAHSK
Trigger: TTTGGAATGAGCAGTCTTCCATTCCAACTTTAGTTT...GCAGGGCTCCGGGCCTGCTCTTCTGCGTCCACCCCGGATCCTGCTTTTGTCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602346.5
CDS-3UTR CCA 90 bp GCTCATTCCAAATCTGTCCTATTGTCCAGCATCCTATGGCCCATTCCAGAAAGTGGCCCCCTGAAGTCCTaGCGGTTTCTAGCCAGCCTC +
Preference number: 4 (lower is better)
Translates to: AHSKSVLLSSILWPIPESGPLKS*RFLASL
Trigger: GAGGCTGGCTAGAAACCGCCAGGACTTCAGGGGGCC...ACTTTCTGGAATGGGCCATAGGATGCTGGACAATAGGACAGATTTGGAATGAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000602346.5
CDS-3UTR TCA 90 bp TCAGCGCTGGAGCCATTTCTCGACGGTGCTTTCTGTTTGTTTGTTTGTTTTTGTCCCCGGCACCCTCCGTaGACTTGGGCACCCAAAACT +
Preference number: 4 (lower is better)
Translates to: SALEPFLDGAFCLFVCFCPRHPP*TWAPKT
Trigger: AGTTTTGGGTGCCCAAGTTCACGGAGGGTGCCGGGG...ACAAAAACAAACAAACAAACAGAAAGCACCGTCGAGAAATGGCTCCAGCGCTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000531399.6
ENST00000602346.5
CDS-3UTR TCA 90 bp TGCGTCATCTTCATTATTGGCCACAGGAAACGACTTCTTGGAGTAAGTGACTGGCTGCCTGTGCTGGGATaGATGCATGGCCCCTGCATC +
Preference number: 4 (lower is better)
Translates to: CVIFIIGHRKRLLGVSDWLPVLG*MHGPCI
Trigger: GATGCAGGGGCCATGCATTCATCCCAGCACAGGCAG...CCAGTCACTTACTCCAAGAAGTCGTTTCCTGTGGCCAATAATGAAGATGACGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527504.1
ENST00000602346.5
CDS-3UTR GCA 90 bp TTTAGCTCTCACTTTCTGGATGCAGCCAGGCACCACCTTCCTTCCAAAAGCCTTCCCAGCTCTGTCCAATaGTCTGAACTGGGGACAGTC +
Preference number: 4 (lower is better)
Translates to: FSSHFLDAARHHLPSKSLPSSVQ*SELGTV
Trigger: GACTGTCCCCAGTTCAGAGCATTGGACAGAGCTGGG...AAGGCTTTTGGAAGGAAGGTGGTGCCTGGCTGCATCCAGAAAGTGAGAGCTAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000527504.1
ENST00000602346.5
CDS-3UTR GCA 90 bp AGATTTGGGGATACAGAAGGATGCAAAATGAGGCAACCTAGCCACCCAACTGGCCCCATGCGCTCCACATaGGTCCTTTGTTCAGCCTCT +
Preference number: 4 (lower is better)
Translates to: RFGDTEGCKMRQPSHPTGPMRST*VLCSAS
Trigger: AGAGGCTGAACAAAGGACGCATGTGGAGCGCATGGG...GCCAGTTGGGTGGCTAGGTTGCCTCATTTTGCATCCTTCTGTATCCCCAAATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000602346.5
CDS-3UTR GCA 90 bp GCCTGTGCTGGGATGAATGCATGGCCCCTGCATCCTTACCCCCTCCTCAGAGCCAGCAGTTTACAACTCTaGCATGATGTCATTTTGTCA +
Preference number: 4 (lower is better)
Translates to: ACAGMNAWPLHPYPLLRASSLQL*HDVILS
Trigger: TGACAAAATGACATCATGGCAGAGTTGTAAACTGCT...GGCTCTGAGGAGGGGGTAAGGATGCAGGGGCCATGCATTCATCCCAGCACAGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000602346.5
CDS-3UTR CCA 90 bp CGGAAGTGTCATGTAGACTATGGCTCAGCTGCAGCCCACCCAGGGAAGCTGGGGAGAAAGCAGAGAACTTaGCTTCTCCTCATTTGTTGT +
Preference number: 4 (lower is better)
Translates to: RKCHVDYGSAAAHPGKLGRKQRT*LLLICC
Trigger: ACAACAAATGAGGAGAAGCCAAGTTCTCTGCTTTCT...CCCCAGCTTCCCTGGGTGGGCTGCAGCTGAGCCATAGTCTACATGACACTTCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458238.6
CDS-3UTR CCA 90 bp CCCATGCGCTCCACATGCGTCCTTTGTTCAGCCTCTCCATTTAGCTCTCACTTTCCCAGATGCTGTCACTaGGTCCTGGTGAGTCTGAAA +
Preference number: 4 (lower is better)
Translates to: PMRSTCVLCSASPFSSHFPRCCH*VLVSLK
Trigger: TTTCAGACTCACCAGGACCCAGTGACAGCATCTGGG...AAAGTGAGAGCTAAATGGAGAGGCTGAACAAAGGACGCATGTGGAGCGCATGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527504.1
ENST00000602346.5
CDS-3UTR CCA 90 bp AGATTTGGGGATACAGAAGGATGCAAAATGAGGCAACCTAGCCACCCAACTGGCTCCAATGCTCTGAACTaGGGACAGTCCGCATGCAGC +
Preference number: 4 (lower is better)
Translates to: RFGDTEGCKMRQPSHPTGSNALN*GQSACS
Trigger: GCTGCATGCGGACTGTCCCCAGTTCAGAGCATTGGA...GCCAGTTGGGTGGCTAGGTTGCCTCATTTTGCATCCTTCTGTATCCCCAAATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602346.5
CDS-3UTR CCA 90 bp TCACCACAGCTCGGGGCTTTGTCACCCCAGCACACCTGGGCCCTGCACCTCAGATCTTTGCAAAACGTATaGAGTCCTTGTTATTTACCA +
Preference number: 4 (lower is better)
Translates to: SPQLGALSPQHTWALHLRSLQNV*SPCYLP
Trigger: TGGTAAATAACAAGGACTCCATACGTTTTGCAAAGA...TCTGAGGTGCAGGGCCCAGGTGTGCTGGGGTGACAAAGCCCCGAGCTGTGGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000602346.5
CDS-3UTR TCA 90 bp TTCAGATTTGGGGATACAGAAGGATGCAAAATGAGGCAACCTAGCCACCCAACTCCACTGCAGGAAGCTTaGGCAGATCTGAAGCTCGCC +
Preference number: 4 (lower is better)
Translates to: FRFGDTEGCKMRQPSHPTPLQEA*ADLKLA
Trigger: GGCGAGCTTCAGATCTGCTCAAGCTTCCTGCAGTGG...AGTTGGGTGGCTAGGTTGCCTCATTTTGCATCCTTCTGTATCCCCAAATCTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000531399.6
ENST00000602346.5
CDS-3UTR TCA 90 bp TTCCGAGTGCGTCATCTTCATTATTGGCCACAGGAAACGACTTCTTGGAGTAAGCTCAGACGCTGCGTGTaGGCTTCTGGGGAGAGAAGT +
Preference number: 4 (lower is better)
Translates to: FRVRHLHYWPQETTSWSKLRRCV*ASGERS
Trigger: ACTTCTCTCCCCAGAAGCTCACACGCAGCGTCTGAG...CTTACTCCAAGAAGTCGTTTCCTGTGGCCAATAATGAAGATGACGCACTCGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527504.1
ENST00000602346.5
CDS-3UTR GCA 90 bp GTTGCTGAGGACCAAGATCCAGACGAGACTGACAGAGCTTCTATTCCCCGGCACCTCAGAAAACCTTTCTaGCTCCTAGAAACCCAGGAT +
Preference number: 4 (lower is better)
Translates to: VAEDQDPDETDRASIPRHLRKPF*LLETQD
Trigger: ATCCTGGGTTTCTAGGAGGCAGAAAGGTTTTCTGAG...GTGCCGGGGAATAGAAGCTCTGTCAGTCTCGTCTGGATCTTGGTCCTCAGCAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000527504.1
ENST00000602346.5
CDS-3UTR GCA 90 bp TGCGCTGCCTGTGCTGGGATGAATGCATGGCCCCTGCATCCTTACCCCCTCCTCAGAGAATTTACTCTTTaGAAAACGTATGGAGTCCTT +
Preference number: 4 (lower is better)
Translates to: CAACAGMNAWPLHPYPLLREFTL*KTYGVL
Trigger: AAGGACTCCATACGTTTTGCAAAGAGTAAATTCTCT...GAGGAGGGGGTAAGGATGCAGGGGCCATGCATTCATCCCAGCACAGGCAGCGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000602346.5
CDS-3UTR CCA 90 bp TTTAGCTCTCACTTTCTGGATGCAGCCAGGCACCACCTTCCTTCCAAAAGCCTTCCACTCAGGTTCCCATaGAAACCAAACTGGGACAGG +
Preference number: 4 (lower is better)
Translates to: FSSHFLDAARHHLPSKSLPLRFP*KPNWDR
Trigger: CCTGTCCCAGTTTGGTTTCCATGGGAACCTGAGTGG...AAGGCTTTTGGAAGGAAGGTGGTGCCTGGCTGCATCCAGAAAGTGAGAGCTAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527504.1
ENST00000602346.5
CDS-3UTR TCA 90 bp TCCACATGCGTCCTTTGTTCAGCCTCTCCATTTAGCTCTCACTTTCTGGATGCATCCTCTTGGGACTATTaGTCAGGGCTGTCAGTTCCC +
Preference number: 4 (lower is better)
Translates to: STCVLCSASPFSSHFLDASSWDY*SGLSVP
Trigger: GGGAACTGACAGCCCTGATCAATAGTCCCAAGAGGA...TGCATCCAGAAAGTGAGAGCTAAATGGAGAGGCTGAACAAAGGACGCATGTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527504.1
ENST00000602346.5
CDS-3UTR GCA 90 bp CCCTATGTCGTTACCTGGATTTATCGAGAGGACATCAAATCACTTAATTCTATCGGTGAGAGCAGAGTCTaGCCGGGGCTGTGGCAGGCA +
Preference number: 4 (lower is better)
Translates to: PYVVTWIYREDIKSLNSIGESRV*PGLWQA
Trigger: TGCCTGCCACAGCCCCGGGCAGACTCTGCTCTCACC...GATAGAATTAAGTGATTTGATGTCCTCTCGATAAATCCAGGTAACGACATAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602346.5
CDS-3UTR GCA 90 bp TGCGTCATCTTCATTATTGGCCACAGGAAACGACTTCTTGGAGTAAGTGACTGGCCCAGCTCTGTCCAATaGTCTGAACTGGGGACAGTC +
Preference number: 4 (lower is better)
Translates to: CVIFIIGHRKRLLGVSDWPSSVQ*SELGTV
Trigger: GACTGTCCCCAGTTCAGAGCATTGGACAGAGCTGGG...CCAGTCACTTACTCCAAGAAGTCGTTTCCTGTGGCCAATAATGAAGATGACGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527504.1
ENST00000602346.5
CDS-3UTR GCA 90 bp CAGCCTCTCCATTTAGCTCTCACTTTCTGGATGCAGCCAGGCACCACCTTCCTTCTCAGAAAACCTTTCTaGCTCCTAGAAACCCAGGAT +
Preference number: 4 (lower is better)
Translates to: QPLHLALTFWMQPGTTFLLRKPF*LLETQD
Trigger: ATCCTGGGTTTCTAGGAGGCAGAAAGGTTTTCTGAG...AAGGAAGGTGGTGCCTGGCTGCATCCAGAAAGTGAGAGCTAAATGGAGAGGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527504.1
ENST00000602346.5
CDS-3UTR GCA 90 bp TGTTCAGCCTCTCCATTTAGCTCTCACTTTCTGGATGCAGCCAGGCACCACCTTCCACAAGCTTCCGAGTaGGTCATCTTCATTATTGGC +
Preference number: 4 (lower is better)
Translates to: CSASPFSSHFLDAARHHLPQASE*VIFIIG
Trigger: GCCAATAATGAAGATGACGCACTCGGAAGCTTGTGG...AAGGTGGTGCCTGGCTGCATCCAGAAAGTGAGAGCTAAATGGAGAGGCTGAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527504.1
ENST00000602346.5
CDS-3UTR GCA 90 bp CCCATGCGCTCCACATGCGTCCTTTGTTCAGCCTCTCCATTTAGCTCTCACTTTGGGGATACAGAAGGATaGAAAATGAGGCAACCTAGC +
Preference number: 4 (lower is better)
Translates to: PMRSTCVLCSASPFSSHFGDTEG*KMRQPS
Trigger: GCTAGGTTGCCTCATTTTGCATCCTTCTGTATCCCC...AAAGTGAGAGCTAAATGGAGAGGCTGAACAAAGGACGCATGTGGAGCGCATGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602346.5
CDS-3UTR TCA 90 bp CACTTAATTCTATCACGGCCCACACCCATGAATTCACTAAGTAATTATCACACACTTGCGGGGCATGGCTaGGTTCCTGCCTGTCCTTGG +
Preference number: 4 (lower is better)
Translates to: HLILSRPTPMNSLSNYHTLAGHG*VPACPW
Trigger: CCAAGGACAGGCAGGAACTCAGCCATGCCCCGCAAG...TGTGTGATAATTACTTAGTGAATTCATGGGTGTGGGCCGTGATAGAATTAAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602346.5
CDS-3UTR TCA 90 bp AGACAGTTGCTGAGGACCAAGATCCAGACGAGACTGACAGAGCTTCTATTCCCCTTTTCTGATCATAGCTaGGCTCAAATGCTGACCCCA +
Preference number: 4 (lower is better)
Translates to: RQLLRTKIQTRLTELLFPFSDHS*AQMLTP
Trigger: TGGGGTCAGCATTTGAGCTCAGCTATGATCAGAAAA...GGGGAATAGAAGCTCTGTCAGTCTCGTCTGGATCTTGGTCCTCAGCAACTGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000602346.5
CDS-3UTR CCA 90 bp AGCCATTTCTCGACGGTGCTTTCTGTTTGTTTGTTTGTTTTTGTTTTGAGATGGGCTCCTTGCGGGGCATaGCTGAGTTCCTGCCTGTCC +
Preference number: 4 (lower is better)
Translates to: SHFSTVLSVCLFVFVLRWAPCGA*LSSCLS
Trigger: GGACAGGCAGGAACTCAGCCATGCCCCGCAAGGAGC...CCATCTCAAAACAAAAACAAACAAACAAACAGAAAGCACCGTCGAGAAATGGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000602346.5
CDS-3UTR CCA 90 bp CCTCTCCATTTAGCTCTCACTTTCTGGATGCAGCCAGGCACCACCTTCCTTCCACGTCATCTTCATTATTaGCCACAGGAAACGACTTCT +
Preference number: 4 (lower is better)
Translates to: PLHLALTFWMQPGTTFLPRHLHY*PQETTS
Trigger: AGAAGTCGTTTCCTGTGGCCAATAATGAAGATGACG...TGGAAGGAAGGTGGTGCCTGGCTGCATCCAGAAAGTGAGAGCTAAATGGAGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527504.1
ENST00000602346.5
3UTR CAA 72 bp GGCCCATTCCAGAAAGTTCAGTGGGTGTCAATTAGCTaGGCTGTAGTGACCACTCTTAAGTGTACCGTTACC +
Preference number: 4 (lower is better)
Translates to: GPFQKVQWVSIS*AVVTTLKCTVT
Trigger: GGTAACGGTACACTTAAGAGTGGTCACTACAGCCAAGCTAATTGACACCCACTGAACTTTCTGGAATGGGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602346.5
CDS-3UTR TCA 90 bp CCCTATGTCGTTACCTGGATTTATCGAGAGGACATCAAATCACTTAATTCTATCGACTGGGTGCAGGTCTaGGCAGAGGCTTTCGGAGTG +
Preference number: 4 (lower is better)
Translates to: PYVVTWIYREDIKSLNSIDWVQV*AEAFGV
Trigger: CACTCCGAAAGCCTCTGCTCAGACCTGCACCCAGTC...GATAGAATTAAGTGATTTGATGTCCTCTCGATAAATCCAGGTAACGACATAGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602346.5
CDS-3UTR TCA 90 bp TCAGCGCTGGAGCCATTTCTCGACGGTGCTTTCTGTTTGTTTGTTTGTTTTTGTAGATCCAGACGAGACTaGCAGAGCTTCTATTCCCCG +
Preference number: 4 (lower is better)
Translates to: SALEPFLDGAFCLFVCFCRSRRD*QSFYSP
Trigger: CGGGGAATAGAAGCTCTGTCAGTCTCGTCTGGATCT...ACAAAAACAAACAAACAAACAGAAAGCACCGTCGAGAAATGGCTCCAGCGCTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000531399.6
ENST00000602346.5
CDS-3UTR TCA 90 bp AAATATGCTAATGATAACAGTAAGATATGTAGGACATACTACGTACAGGTGCTGCAGTGCTGCTGGGGGTaGAGGCAACGGGTGGGTGAG +
Preference number: 4 (lower is better)
Translates to: KYANDNSKICRTYYVQVLQCCWG*RQRVGE
Trigger: CTCACCCACCCGTTGCCTTCACCCCCAGCAGCACTG...CAGCACCTGTACGTAGTATGTCCTACATATCTTACTGTTATCATTAGCATATTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000602346.5
CDS-3UTR TCA 90 bp CACTTAATTCTATCACGGCCCACACCCATGAATTCACTAAGTAATTATCACACAAATGGAAGCAGACTGTaGGGCCCTGCAGCGCCGTCT +
Preference number: 4 (lower is better)
Translates to: HLILSRPTPMNSLSNYHTNGSRL*GPAAPS
Trigger: AGACGGCGCTGCAGGGCCTCACAGTCTGCTTCCATT...TGTGTGATAATTACTTAGTGAATTCATGGGTGTGGGCCGTGATAGAATTAAGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602346.5
CDS-3UTR TCA 90 bp AGACAGTTGCTGAGGACCAAGATCCAGACGAGACTGACAGAGCTTCTATTCCCCATTTTACCCACACAGTaGATCTGTGAGATGGAAGCT +
Preference number: 4 (lower is better)
Translates to: RQLLRTKIQTRLTELLFPILPTQ*ICEMEA
Trigger: AGCTTCCATCTCACAGATTCACTGTGTGGGTAAAAT...GGGGAATAGAAGCTCTGTCAGTCTCGTCTGGATCTTGGTCCTCAGCAACTGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602346.5
CDS-3UTR GCA 90 bp GTTCAGCCTCTCCATTTAGCTCTCACTTTCTGGATGCAGCCAGGCACCACCTTCAGAAATTGGCGTCTCTaGACAAAGCTGATTTTAGTC +
Preference number: 4 (lower is better)
Translates to: VQPLHLALTFWMQPGTTFRNWRL*TKLILV
Trigger: GACTAAAATCAGCTTTGTGCAGAGACGCCAATTTCT...GAAGGTGGTGCCTGGCTGCATCCAGAAAGTGAGAGCTAAATGGAGAGGCTGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602346.5
CDS-3UTR CCA 90 bp CACTTAATTCTATCACGGCCCACACCCATGAATTCACTAAGTAATTATCACACAGGTGAAGGCAACGGGTaGGTGAGCACGGACAGTGTG +
Preference number: 4 (lower is better)
Translates to: HLILSRPTPMNSLSNYHTGEGNG*VSTDSV
Trigger: CACACTGTCCGTGCTCACCCACCCGTTGCCTTCACC...TGTGTGATAATTACTTAGTGAATTCATGGGTGTGGGCCGTGATAGAATTAAGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602346.5
CDS-3UTR CCA 90 bp ATAAAATACATCCACAGCAGTTTACAACTCTGCCATGATGTCATTTTGTCAGATGTTCCTGCCTGTCCTTaGCAGGCCCGCAGTGGTGGG +
Preference number: 4 (lower is better)
Translates to: IKYIHSSLQLCHDVILSDVPACP*QARSGG
Trigger: CCCACCACTGCGGGCCTGCCAAGGACAGGCAGGAAC...ATCTGACAAAATGACATCATGGCAGAGTTGTAAACTGCTGTGGATGTATTTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602346.5
CDS-3UTR TCA 90 bp GGATCCAGACAGTTGCTGAGGACCAAGATCCAGACGAGACTGACAGAGCTTCTACACACAGTGAATCTGTaGGATGGAAGCTATTATCAT +
Preference number: 4 (lower is better)
Translates to: GSRQLLRTKIQTRLTELLHTVNL*DGSYYH
Trigger: ATGATAATAGCTTCCATCTCACAGATTCACTGTGTG...TAGAAGCTCTGTCAGTCTCGTCTGGATCTTGGTCCTCAGCAACTGTCTGGATCC
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602346.5
CDS-3UTR GCA 90 bp AGCCATTTCTCGACGGTGCTTTCTGTTTGTTTGTTTGTTTTTGTTTTGAGATGGCCTGCACATCTGTGCTaGTGTGACTGGGTGCAGGTC +
Preference number: 4 (lower is better)
Translates to: SHFSTVLSVCLFVFVLRWPAHLC*CDWVQV
Trigger: GACCTGCACCCAGTCACAGCAGCACAGATGTGCAGG...CCATCTCAAAACAAAAACAAACAAACAAACAGAAAGCACCGTCGAGAAATGGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000531399.6
ENST00000602346.5
CDS-3UTR CCA 90 bp TCAGCGCTGGAGCCATTTCTCGACGGTGCTTTCTGTTTGTTTGTTTGTTTTTGTTCCCCTAGGTATTCATaGCATCCAGGGGCATTTCAC +
Preference number: 4 (lower is better)
Translates to: SALEPFLDGAFCLFVCFCSPRYS*HPGAFH
Trigger: GTGAAATGCCCCTGGATGCCATGAATACCTAGGGGA...ACAAAAACAAACAAACAAACAGAAAGCACCGTCGAGAAATGGCTCCAGCGCTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000602346.5
CDS-3UTR CCA 90 bp TTTAGCTCTCACTTTCTGGATGCAGCCAGGCACCACCTTCCTTCCAAAAGCCTTTTCCAGAAAGTTCAGTaGGTGTCAATTAGCTTGGCT +
Preference number: 4 (lower is better)
Translates to: FSSHFLDAARHHLPSKSLFQKVQ*VSISLA
Trigger: AGCCAAGCTAATTGACACCCACTGAACTTTCTGGAA...AAGGCTTTTGGAAGGAAGGTGGTGCCTGGCTGCATCCAGAAAGTGAGAGCTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602346.5
CDS-3UTR TCA 90 bp CACTTAATTCTATCACGGCCCACACCCATGAATTCACTAAGTAATTATCACACAACTTCTTGGAGTAAGTaGCTGGTGCTCCGAGGCCCA +
Preference number: 4 (lower is better)
Translates to: HLILSRPTPMNSLSNYHTTSWSK*LVLRGP
Trigger: TGGGCCTCGGAGCACCAGTCACTTACTCCAAGAAGT...TGTGTGATAATTACTTAGTGAATTCATGGGTGTGGGCCGTGATAGAATTAAGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602346.5
CDS-3UTR CCA 90 bp TTTGCAAAACGTATGGAGTCCTTGTTATTTACCAAATATCATGTTACAGACCAGCCCGCAGTGGTGGGGTaGCTCAGGCAGTTACCCTTT +
Preference number: 4 (lower is better)
Translates to: FAKRMESLLFTKYHVTDQPAVVG*LRQLPF
Trigger: AAAGGGTAACTGCCTGAGCCACCCCACCACTGCGGG...CTGGTCTGTAACATGATATTTGGTAAATAACAAGGACTCCATACGTTTTGCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602346.5
CDS-3UTR TCA 90 bp TGGAGCCATTTCTCGACGGTGCTTTCTGTTTGTTTGTTTGTTTTTGTTTTGAGAAGATCCAGACGAGACTaGCAGAGCTTCTATTCCCCG +
Preference number: 4 (lower is better)
Translates to: WSHFSTVLSVCLFVFVLRRSRRD*QSFYSP
Trigger: CGGGGAATAGAAGCTCTGTCAGTCTCGTCTGGATCT...TCTCAAAACAAAAACAAACAAACAAACAGAAAGCACCGTCGAGAAATGGCTCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000531399.6
ENST00000602346.5
CDS-3UTR TCA 90 bp AGCCATTTCTCGACGGTGCTTTCTGTTTGTTTGTTTGTTTTTGTTTTGAGATGGGATCCAGACAGTTGCTaGGGACCAAGATCCAGACGA +
Preference number: 4 (lower is better)
Translates to: SHFSTVLSVCLFVFVLRWDPDSC*GPRSRR
Trigger: TCGTCTGGATCTTGGTCCTCAGCAACTGTCTGGATC...CCATCTCAAAACAAAAACAAACAAACAAACAGAAAGCACCGTCGAGAAATGGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000531399.6
ENST00000602346.5
CDS-3UTR GCA 90 bp TGGAGTCCTTGTTATTTACCAAATATCATGTTACAGACCAGGGATAAAAACAACGGAGTAAGTGACTGGTaGTCCGAGGCCCATCTGGAC +
Preference number: 4 (lower is better)
Translates to: WSPCYLPNIMLQTRDKNNGVSDW*SEAHLD
Trigger: GTCCAGATGGGCCTCGGAGCACCAGTCACTTACTCC...GTTGTTTTTATCCCTGGTCTGTAACATGATATTTGGTAAATAACAAGGACTCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000602346.5
CDS-3UTR CCA 90 bp AAATATGCTAATGATAACAGTAAGATATGTAGGACATACTACGTACAGGTGCTGGAGGAGGAGGAGGGCTaGCCTTCCTCTTGGGACTAT +
Preference number: 4 (lower is better)
Translates to: KYANDNSKICRTYYVQVLEEEEG*PSSWDY
Trigger: ATAGTCCCAAGAGGAAGGCCAGCCCTCCTCCTCCTC...CAGCACCTGTACGTAGTATGTCCTACATATCTTACTGTTATCATTAGCATATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602346.5
CDS-3UTR CCA 90 bp CACTTAATTCTATCACGGCCCACACCCATGAATTCACTAAGTAATTATCACACACCACTCAGGTTCCCATaGAAACCAAACTGGGACAGG +
Preference number: 4 (lower is better)
Translates to: HLILSRPTPMNSLSNYHTPLRFP*KPNWDR
Trigger: CCTGTCCCAGTTTGGTTTCCATGGGAACCTGAGTGG...TGTGTGATAATTACTTAGTGAATTCATGGGTGTGGGCCGTGATAGAATTAAGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602346.5
CDS-3UTR CCA 90 bp TACATCCACAGCAGTTTACAACTCTGCCATGATGTCATTTTGTCAGATGGCAAAAAACCTGAGAGGAAATaGAAGCAGACTGTGAGGCCC +
Preference number: 4 (lower is better)
Translates to: YIHSSLQLCHDVILSDGKKPERK*KQTVRP
Trigger: GGGCCTCACAGTCTGCTTCCATTTCCTCTCAGGTTT...TTTGCCATCTGACAAAATGACATCATGGCAGAGTTGTAAACTGCTGTGGATGTA
44% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000602346.5
CDS-3UTR TCA 90 bp GGAAGCTATTATCATTCCATTTTACAGACACCTACACTGAGACTCAGGCAGGCCTTTACAACTCTGCCATaGTGTCATTTTGTCAGATGG +
Preference number: 4 (lower is better)
Translates to: GSYYHSILQTPTLRLRQAFTTLP*CHFVRW
Trigger: CCATCTGACAAAATGACATCATGGCAGAGTTGTAAA...GGCCTGCCTGAGTCTCAGTGTAGGTGTCTGTAAAATGGAATGATAATAGCTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602346.5
3UTR CAA 72 bp ATCCACAGCAGTTTACAACTCTGCCATGATGTCATTTaGTCAGATGGCAAATTTCAGGAGAGGGTCAAACTC +
Preference number: 4 (lower is better)
Translates to: IHSSLQLCHDVI*SDGKFQERVKL
Trigger: GAGTTTGACCCTCTCCTGAAATTTGCCATCTGACAAAATGACATCATGGCAGAGTTGTAAACTGCTGTGGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602346.5
CDS-3UTR TCA 90 bp CACTTAATTCTATCACGGCCCACACCCATGAATTCACTAAGTAATTATCACACAAAGGGATCTGAAACCTaGGAGGAAATGGAAGCAGAC +
Preference number: 4 (lower is better)
Translates to: HLILSRPTPMNSLSNYHTKGSET*EEMEAD
Trigger: GTCTGCTTCCATTTCCTCTCAGGTTTCAGATCCCTT...TGTGTGATAATTACTTAGTGAATTCATGGGTGTGGGCCGTGATAGAATTAAGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602346.5
CDS-3UTR CCA 90 bp TCAGCGCTGGAGCCATTTCTCGACGGTGCTTTCTGTTTGTTTGTTTGTTTTTGTAGAAAGCAGAGAACTTaGCTTCTCCTCATTTGTTGT +
Preference number: 4 (lower is better)
Translates to: SALEPFLDGAFCLFVCFCRKQRT*LLLICC
Trigger: ACAACAAATGAGGAGAAGCCAAGTTCTCTGCTTTCT...ACAAAAACAAACAAACAAACAGAAAGCACCGTCGAGAAATGGCTCCAGCGCTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000531399.6
ENST00000602346.5
CDS-3UTR CCA 90 bp TCCACATGCGTCCTTTGTTCAGCCTCTCCATTTAGCTCTCACTTTCTGGATGCAAGTGAATCTGTGAGATaGAAGCTATTATCATTCCAT +
Preference number: 4 (lower is better)
Translates to: STCVLCSASPFSSHFLDASESVR*KLLSFH
Trigger: ATGGAATGATAATAGCTTCCATCTCACAGATTCACT...TGCATCCAGAAAGTGAGAGCTAAATGGAGAGGCTGAACAAAGGACGCATGTGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602346.5
3UTR CAA 72 bp ACCAAGGCCTCAGTAGGGAGGGAGAGAATTTACTCTTaGCAAAACGTATGGAGTCCTTGTTATTTACCAAAT +
Preference number: 4 (lower is better)
Translates to: TKASVGRERIYS*QNVWSPCYLPN
Trigger: ATTTGGTAAATAACAAGGACTCCATACGTTTTGCAAAGAGTAAATTCTCTCCCTCCCTACTGAGGCCTTGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602346.5
CDS-3UTR GCA 90 bp TTTGCAAAACGTATGGAGTCCTTGTTATTTACCAAATATCATGTTACAGACCAGCCAGCTCGCTGTATGTaGACATCGTTTCCATGTGTG +
Preference number: 4 (lower is better)
Translates to: FAKRMESLLFTKYHVTDQPARCM*TSFPCV
Trigger: CACACATGGAAACGATGTGCACATACAGCGAGCTGG...CTGGTCTGTAACATGATATTTGGTAAATAACAAGGACTCCATACGTTTTGCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602346.5
CDS-3UTR CCA 90 bp TACATCCACAGCAGTTTACAACTCTGCCATGATGTCATTTTGTCAGATGGCAAAAGAAAGCAGAGAACTTaGCTTCTCCTCATTTGTTGT +
Preference number: 4 (lower is better)
Translates to: YIHSSLQLCHDVILSDGKRKQRT*LLLICC
Trigger: ACAACAAATGAGGAGAAGCCAAGTTCTCTGCTTTCT...TTTGCCATCTGACAAAATGACATCATGGCAGAGTTGTAAACTGCTGTGGATGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602346.5
CDS-3UTR TCA 90 bp TTTGCAAAACGTATGGAGTCCTTGTTATTTACCAAATATCATGTTACAGACCAGCTCTTGAAATTGACTTaGAGGTGTTTACCTTGCAGA +
Preference number: 4 (lower is better)
Translates to: FAKRMESLLFTKYHVTDQLLKLT*RCLPCR
Trigger: TCTGCAAGGTAAACACCTTCAAGTCAATTTCAAGAG...CTGGTCTGTAACATGATATTTGGTAAATAACAAGGACTCCATACGTTTTGCAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602346.5
CDS-3UTR CCA 90 bp AAATATGCTAATGATAACAGTAAGATATGTAGGACATACTACGTACAGGTGCTGTGTCATTTTGTCAGATaGCAAATTTCAGGAGAGGGT +
Preference number: 4 (lower is better)
Translates to: KYANDNSKICRTYYVQVLCHFVR*QISGEG
Trigger: ACCCTCTCCTGAAATTTGCCATCTGACAAAATGACA...CAGCACCTGTACGTAGTATGTCCTACATATCTTACTGTTATCATTAGCATATTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602346.5
CDS TCA 90 bp TGTGCTGCTGTGACTGGGTGCAGGTCTGAGCAGAGGCTTTCGGAGTaGGCTGAGCAGGCGAGCCCGAGCACGGCCTCTCAGGGAGCGAGC +
Preference number: 5 (lower is better)
Translates to: CAAVTGCRSEQRLSE*AEQASPSTASQGAS
Trigger: GCTCGCTCCCTGAGAGGCCGTGCTCGGGCTCGCCTGCTCAGCTCACTCCGAAAGCCTCTGCTCAGACCTGCACCCAGTCACAGCAGCACA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525390.1
ENST00000527504.1
ENST00000602346.5
CDS-3UTR CAA 90 bp TCACCACAGCTCGGGGCTTTGTCACCCCAGCACACCTGGGCCCTGCACCTCAGAATGCCCCTGGGCTCCTaGCGGGGCATGGCTGAGTTC +
Preference number: 5 (lower is better)
Translates to: SPQLGALSPQHTWALHLRMPLGS*RGMAEF
Trigger: GAACTCAGCCATGCCCCGCAAGGAGCCCAGGGGCAT...TCTGAGGTGCAGGGCCCAGGTGTGCTGGGGTGACAAAGCCCCGAGCTGTGGTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000527504.1
ENST00000602346.5
CDS-3UTR CAA 90 bp GCACCTCAGACGCTGCGTGTGAGCTTCTGGGGAGAGAAGTGTGGGCCTCCAGGGCCACAGCTCGGGGCTTaGTCACCCCAGCACACCTGG +
Preference number: 5 (lower is better)
Translates to: APQTLRVSFWGEKCGPPGPQLGA*SPQHTW
Trigger: CCAGGTGTGCTGGGGTGACAAAGCCCCGAGCTGTGG...CCCTGGAGGCCCACACTTCTCTCCCCAGAAGCTCACACGCAGCGTCTGAGGTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000527504.1
ENST00000602346.5
CDS TCA 90 bp GGCCTCTCTTCAGGGACAAGGTGGCCTTATACCAAGCCAAAGTGCTaGGGGCGCAGGGAGACCCGCGAGACAGGGCCCCCTGAAGTCCTG +
Preference number: 5 (lower is better)
Translates to: GLSSGTRWPYTKPKC*GRRETRETGPPEVL
Trigger: CAGGACTTCAGGGGGCCCTGTCTCGCGGGTCTCCCTGCGCCCTCAGCACTTTGGCTTGGTATAAGGCCACCTTGTCCCTGAAGAGAGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000602346.5
CDS-3UTR CAA 90 bp CTGGACAAAAGCAGGATCCGGGGTGGACGCAGAAGAGCAGGCCCGGAGCCCTGCACTCAGGCAGGCCAGTaGTCCTGCCCATGTACACAC +
Preference number: 5 (lower is better)
Translates to: LDKSRIRGGRRRAGPEPCTQAGQ*SCPCTH
Trigger: GTGTGTACATGGGCAGGACAACTGGCCTGCCTGAGT...GCAGGGCTCCGGGCCTGCTCTTCTGCGTCCACCCCGGATCCTGCTTTTGTCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602346.5
CDS TCA 90 bp GGTGGCTCAGGCAGTTACCCTTTTCACAACCAGTGCTGCTGGGGGTaGAGGCAACGGGTGGGTGAGCACGGACAGTGTGAGCCACGTGGC +
Preference number: 5 (lower is better)
Translates to: GGSGSYPFHNQCCWG*RQRVGEHGQCEPRG
Trigger: GCCACGTGGCTCACACTGTCCGTGCTCACCCACCCGTTGCCTTCACCCCCAGCAGCACTGGTTGTGAAAAGGGTAACTGCCTGAGCCACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000525390.1
ENST00000527504.1
ENST00000602346.5
CDS-3UTR CAA 90 bp GCTCGGGGCTTTGTCACCCCAGCACACCTGGGCCCTGCACCTCAGACGCTGCGTGCTTCTCCTCATTTGTaGTTAGGGCCAGTCCCTAAG +
Preference number: 5 (lower is better)
Translates to: ARGFVTPAHLGPAPQTLRASPHL*LGPVPK
Trigger: CTTAGGGACTGGCCCTAACAACAAATGAGGAGAAGC...ACGCAGCGTCTGAGGTGCAGGGCCCAGGTGTGCTGGGGTGACAAAGCCCCGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602346.5
CDS-3UTR CAA 90 bp CTGCGTGTGAGCTTCTGGGGAGAGAAGTGTGGGCCTCCAGGGAGGTGTAGGCGCGGTGAGTCTGAAAACTaGGGATGTCGGCACCACGGT +
Preference number: 5 (lower is better)
Translates to: LRVSFWGEKCGPPGRCRRGESEN*GCRHHG
Trigger: ACCGTGGTGCCGACATCCCAAGTTTTCAGACTCACC...GCGCCTACACCTCCCTGGAGGCCCACACTTCTCTCCCCAGAAGCTCACACGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000527504.1
ENST00000602346.5
CDS-3UTR CAA 90 bp TCTGGACAAAAGCAGGATCCGGGGTGGACGCAGAAGAGCAGGCCCGGAGCCCTGTCAGGATCCAGACAGTaGCTGAGGACCAAGATCCAG +
Preference number: 5 (lower is better)
Translates to: SGQKQDPGWTQKSRPGALSGSRQ*LRTKIQ
Trigger: CTGGATCTTGGTCCTCAGCAACTGTCTGGATCCTGA...CAGGGCTCCGGGCCTGCTCTTCTGCGTCCACCCCGGATCCTGCTTTTGTCCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000527504.1
ENST00000602346.5
CDS TCA 90 bp TCTCGGTTTTCACTGCAGGGACTTACCCAGCCAGGTGTGTGTGTCTaGGCCCTGCCATTCGGAGGCATCACCGAGAGGTTCTGGTCTCCC +
Preference number: 5 (lower is better)
Translates to: SRFSLQGLTQPGVCV*ALPFGGITERFWSP
Trigger: GGGAGACCAGAACCTCTCGGTGATGCCTCCGAATGGCAGGGCTCAGACACACACACCTGGCTGGGTAAGTCCCTGCAGTGAAAACCGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525390.1
ENST00000527504.1
ENST00000602346.5
CDS-3UTR CAA 90 bp GCCTGTGCTGGGATGAATGCATGGCCCCTGCATCCTTACCCCCTCCTCAGAGCCTCAGGATCCAGACAGTaGCTGAGGACCAAGATCCAG +
Preference number: 5 (lower is better)
Translates to: ACAGMNAWPLHPYPLLRASGSRQ*LRTKIQ
Trigger: CTGGATCTTGGTCCTCAGCAACTGTCTGGATCCTGA...GGCTCTGAGGAGGGGGTAAGGATGCAGGGGCCATGCATTCATCCCAGCACAGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000527504.1
ENST00000602346.5
CDS-3UTR CAA 90 bp TCTCAGAAAACCTTTCTGCCTCCTAGAAACCCAGGATTCCGAGGAGGAGGAGGGATGCCCCTGGGCTCCTaGCGGGGCATGGCTGAGTTC +
Preference number: 5 (lower is better)
Translates to: SQKTFLPPRNPGFRGGGGMPLGS*RGMAEF
Trigger: GAACTCAGCCATGCCCCGCAAGGAGCCCAGGGGCAT...CCCTCCTCCTCCTCGGAATCCTGGGTTTCTAGGAGGCAGAAAGGTTTTCTGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000527504.1
ENST00000602346.5
CDS-3UTR CAA 90 bp TCACCACAGCTCGGGGCTTTGTCACCCCAGCACACCTGGGCCCTGCACCTCAGACTGCAGCGCCGTCTCTaGGATGGTTTATTCTTCTCT +
Preference number: 5 (lower is better)
Translates to: SPQLGALSPQHTWALHLRLQRRL*DGLFFS
Trigger: AGAGAAGAATAAACCATCCAAGAGACGGCGCTGCAG...TCTGAGGTGCAGGGCCCAGGTGTGCTGGGGTGACAAAGCCCCGAGCTGTGGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602346.5
CDS TCA 90 bp GGACTATTGATCAGGGCTGTCAGTTCCCAGCTCTGTCCAATGCTCTaGACTGGGGACAGTCCGCATGCAGCTCTGAGGACCCAGATGCTG +
Preference number: 5 (lower is better)
Translates to: GLLIRAVSSQLCPML*TGDSPHAALRTQML
Trigger: CAGCATCTGGGTCCTCAGAGCTGCATGCGGACTGTCCCCAGTTCAGAGCATTGGACAGAGCTGGGAACTGACAGCCCTGATCAATAGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525390.1
ENST00000527504.1
ENST00000602346.5
CDS-3UTR CAA 90 bp AGCCAGTGCAGGTTGTGGCATCCAATGTGGGCGATTGAGGTCATGCCCACTGGGAATGCTTTTCCCCCATaGGTTAAGGGTTGCCCTGGG +
Preference number: 5 (lower is better)
Translates to: SQCRLWHPMWAIEVMPTGNAFPP*VKGCPG
Trigger: CCCAGGGCAACCCTTAACCAATGGGGGAAAAGCATT...CCCAGTGGGCATGACCTCAATCGCCCACATTGGATGCCACAACCTGCACTGGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000458238.6
CDS-3UTR CAA 90 bp GCCTGTGCTGGGATGAATGCATGGCCCCTGCATCCTTACCCCCTCCTCAGAGCCGCGTCATCTTCATTATaGGCCACAGGAAACGACTTC +
Preference number: 5 (lower is better)
Translates to: ACAGMNAWPLHPYPLLRAASSSL*ATGNDF
Trigger: GAAGTCGTTTCCTGTGGCCAATAATGAAGATGACGC...GGCTCTGAGGAGGGGGTAAGGATGCAGGGGCCATGCATTCATCCCAGCACAGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000527504.1
ENST00000602346.5
CDS TCA 90 bp GATCCAGACGAGACTGACAGAGCTTCTATTCCCCGGCACCCTCCGTaGACTTGGGCACCCAAAACTAAGGGATCTGAAACCCAGCCAGGT +
Preference number: 5 (lower is better)
Translates to: DPDETDRASIPRHPP*TWAPKTKGSETQPG
Trigger: ACCTGGCTGGGTTTCAGATCCCTTAGTTTTGGGTGCCCAAGTTCACGGAGGGTGCCGGGGAATAGAAGCTCTGTCAGTCTCGTCTGGATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000458238.6
ENST00000530777.5
ENST00000531399.6
CDS GCA 90 bp TGCCCTGGGGCTTTCAACTCCCAGAATTTCAGGATGAGGCAGCTCTaGACACAGGCCAGGCAAGCTCTTACTGCACTGTCAGGATCCAGA +
Preference number: 5 (lower is better)
Translates to: CPGAFNSQNFRMRQL*TQARQALTALSGSR
Trigger: TCTGGATCCTGACAGTGCAGTAAGAGCTTGCCTGGCCTGTGTGCAGAGCTGCCTCATCCTGAAATTCTGGGAGTTGAAAGCCCCAGGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458238.6
CDS CCA 90 bp ATTGATCAGGGCTGTCAGTTCCCAGCTCTGTCCAATGCTCTGAACTaGGGACAGTCCGCATGCAGCTCTGAGGACCCAGATGCTGTCACT +
Preference number: 5 (lower is better)
Translates to: IDQGCQFPALSNALN*GQSACSSEDPDAVT
Trigger: AGTGACAGCATCTGGGTCCTCAGAGCTGCATGCGGACTGTCCCCAGTTCAGAGCATTGGACAGAGCTGGGAACTGACAGCCCTGATCAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525390.1
ENST00000527504.1
ENST00000602346.5
CDS-3UTR CAA 90 bp AGAAAAGCCAGTGCAGGTTGTGGCATCCAATGTGGGCGATTGAGGTCATGCCCAATCCAATGTGGGCGATaGAGGTCATGCCCACTGGGG +
Preference number: 5 (lower is better)
Translates to: RKASAGCGIQCGRLRSCPIQCGR*RSCPLG
Trigger: CCCCAGTGGGCATGACCTCAATCGCCCACATTGGAT...TGGGCATGACCTCAATCGCCCACATTGGATGCCACAACCTGCACTGGCTTTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458238.6
CDS-3UTR CAA 90 bp TCTCAGAAAACCTTTCTGCCTCCTAGAAACCCAGGATTCCGAGGAGGAGGAGGGGGGCTGGCCTTCCTCTaGGGACTATTGATCAGGGCT +
Preference number: 5 (lower is better)
Translates to: SQKTFLPPRNPGFRGGGGGLAFL*GLLIRA
Trigger: AGCCCTGATCAATAGTCCCAAGAGGAAGGCCAGCCC...CCCTCCTCCTCCTCGGAATCCTGGGTTTCTAGGAGGCAGAAAGGTTTTCTGAGA
56% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000527504.1
ENST00000602346.5
CDS TCA 90 bp TGGTTAAGGGTTGCCCTGGGGCTTTCAACTCCCAGAATTTCAGGATaGGGCAGCTCTGCACACAGGCCAGGCAAGCTCTTACTGCACTGT +
Preference number: 5 (lower is better)
Translates to: WLRVALGLSTPRISG*GSSAHRPGKLLLHC
Trigger: ACAGTGCAGTAAGAGCTTGCCTGGCCTGTGTGCAGAGCTGCCTCATCCTGAAATTCTGGGAGTTGAAAGCCCCAGGGCAACCCTTAACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458238.6
CDS-3UTR CAA 90 bp TGGGGCTTTCAACTCCCAGAATTTCAGGATGAGGCAGCTCTGCACACAGGCCAGTCAGGATCCAGACAGTaGCTGAGGACCAAGATCCAG +
Preference number: 5 (lower is better)
Translates to: WGFQLPEFQDEAALHTGQSGSRQ*LRTKIQ
Trigger: CTGGATCTTGGTCCTCAGCAACTGTCTGGATCCTGA...CTGGCCTGTGTGCAGAGCTGCCTCATCCTGAAATTCTGGGAGTTGAAAGCCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458238.6
CDS-3UTR CAA 90 bp TCACCACAGCTCGGGGCTTTGTCACCCCAGCACACCTGGGCCCTGCACCTCAGATGCCATGATGTCATTTaGTCAGATGGCAAATTTCAG +
Preference number: 5 (lower is better)
Translates to: SPQLGALSPQHTWALHLRCHDVI*SDGKFQ
Trigger: CTGAAATTTGCCATCTGACAAAATGACATCATGGCA...TCTGAGGTGCAGGGCCCAGGTGTGCTGGGGTGACAAAGCCCCGAGCTGTGGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602346.5
CDS-3UTR CAA 90 bp GGATCCAGACAGTTGCTGAGGACCAAGATCCAGACGAGACTGACAGAGCTTCTAGGTGAGTCTGAAAACTaGGGATGTCGGCACCACGGT +
Preference number: 5 (lower is better)
Translates to: GSRQLLRTKIQTRLTELLGESEN*GCRHHG
Trigger: ACCGTGGTGCCGACATCCCAAGTTTTCAGACTCACC...TAGAAGCTCTGTCAGTCTCGTCTGGATCTTGGTCCTCAGCAACTGTCTGGATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527504.1
ENST00000602346.5
CDS-3UTR CAA 90 bp TTCAACTCCCAGAATTTCAGGATGAGGCAGCTCTGCACACAGGCCAGGCAAGCTGCTTCTCCTCATTTGTaGTTAGGGCCAGTCCCTAAG +
Preference number: 5 (lower is better)
Translates to: FNSQNFRMRQLCTQARQAASPHL*LGPVPK
Trigger: CTTAGGGACTGGCCCTAACAACAAATGAGGAGAAGC...AGCTTGCCTGGCCTGTGTGCAGAGCTGCCTCATCCTGAAATTCTGGGAGTTGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458238.6
CDS-3UTR CAA 90 bp TTGCCCTGGGGCTTTCAACTCCCAGAATTTCAGGATGAGGCAGCTCTGCACACATTGGCTTCTCCTCATTaGTTGTTAGGGCCAGTCCCT +
Preference number: 5 (lower is better)
Translates to: LPWGFQLPEFQDEAALHTLASPH*LLGPVP
Trigger: AGGGACTGGCCCTAACAACAAATGAGGAGAAGCCAA...TGTGTGCAGAGCTGCCTCATCCTGAAATTCTGGGAGTTGAAAGCCCCAGGGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458238.6
CDS-3UTR CAA 90 bp AGTGCAGGTTGTGGCATCCAATGTGGGCGATTGAGGTCATGCCCACTGGGGATCCAGAAAGCAGAGAACTaGGCTTCTCCTCATTTGTTG +
Preference number: 5 (lower is better)
Translates to: SAGCGIQCGRLRSCPLGIQKAEN*ASPHLL
Trigger: CAACAAATGAGGAGAAGCCAAGTTCTCTGCTTTCTG...GATCCCCAGTGGGCATGACCTCAATCGCCCACATTGGATGCCACAACCTGCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458238.6
CDS-3UTR CAA 90 bp GGCCACAGGAAACGACTTCTTGGAGTAAGTGACTGGTGCTCCGAGGCCCATCTGCAGAAAGCAGAGAACTaGGCTTCTCCTCATTTGTTG +
Preference number: 5 (lower is better)
Translates to: GHRKRLLGVSDWCSEAHLQKAEN*ASPHLL
Trigger: CAACAAATGAGGAGAAGCCAAGTTCTCTGCTTTCTG...CAGATGGGCCTCGGAGCACCAGTCACTTACTCCAAGAAGTCGTTTCCTGTGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602346.5
CDS GCA 90 bp CGGGAGCTGGGCCAGCTCGCTGTATGTGCACATCGTTTCCATGTGTaGAGCAGAAATTGGCGTCTCTGCACAAAGCTGATTTTAGTCTTT +
Preference number: 5 (lower is better)
Translates to: RELGQLAVCAHRFHV*SRNWRLCTKLILVF
Trigger: AAAGACTAAAATCAGCTTTGTGCAGAGACGCCAATTTCTGCTGCACACATGGAAACGATGTGCACATACAGCGAGCTGGCCCAGCTCCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602346.5
CDS-3UTR CAA 90 bp CCCACTGGGGATCCTCGGAAGTGTCATGTAGACTATGGCTCAGCTGCAGCCCACGTGCACATCATTTATTaGGAAGGTGAACCTAGAATG +
Preference number: 5 (lower is better)
Translates to: PTGDPRKCHVDYGSAAAHVHIIY*EGEPRM
Trigger: CATTCTAGGTTCACCTTCCAAATAAATGATGTGCAC...GTGGGCTGCAGCTGAGCCATAGTCTACATGACACTTCCGAGGATCCCCAGTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458238.6
CDS-3UTR CAA 90 bp GATCTGAAACCTCAGCAAAGTGATGACGCTGCCACTCAGGTTCCCATGGAAACCTTCCTCTTGGGACTATaGATCAGGGCTGTCAGTTCC +
Preference number: 5 (lower is better)
Translates to: DLKPQQSDDAATQVPMETFLLGL*IRAVSS
Trigger: GGAACTGACAGCCCTGATCAATAGTCCCAAGAGGAA...GGTTTCCATGGGAACCTGAGTGGCAGCGTCATCACTTTGCTGAGGTTTCAGATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527504.1
CDS-3UTR CAA 90 bp AGATTTGGGGATACAGAAGGATGCAAAATGAGGCAACCTAGCCACCCAACTGGCTTGGCTTCTCCTCATTaGTTGTTAGGGCCAGTCCCT +
Preference number: 5 (lower is better)
Translates to: RFGDTEGCKMRQPSHPTGLASPH*LLGPVP
Trigger: AGGGACTGGCCCTAACAACAAATGAGGAGAAGCCAA...GCCAGTTGGGTGGCTAGGTTGCCTCATTTTGCATCCTTCTGTATCCCCAAATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000531399.6
ENST00000602346.5
CDS-3UTR CAA 90 bp AGATTTGGGGATACAGAAGGATGCAAAATGAGGCAACCTAGCCACCCAACTGGCTTCCTCTTGGGACTATaGATCAGGGCTGTCAGTTCC +
Preference number: 5 (lower is better)
Translates to: RFGDTEGCKMRQPSHPTGFLLGL*IRAVSS
Trigger: GGAACTGACAGCCCTGATCAATAGTCCCAAGAGGAA...GCCAGTTGGGTGGCTAGGTTGCCTCATTTTGCATCCTTCTGTATCCCCAAATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602346.5
CDS-3UTR CAA 90 bp GACTGTGAGGCCCTGCAGCGCCGTCTCTTGGATGGTTTATTCTTCTCTGGCAGGGAGAGAATTTACTCTTaGCAAAACGTATGGAGTCCT +
Preference number: 5 (lower is better)
Translates to: DCEALQRRLLDGLFFSGRERIYS*QNVWSP
Trigger: AGGACTCCATACGTTTTGCAAAGAGTAAATTCTCTC...CCTGCCAGAGAAGAATAAACCATCCAAGAGACGGCGCTGCAGGGCCTCACAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602346.5
CDS-3UTR CAA 90 bp GGCCACAGGAAACGACTTCTTGGAGTAAGTGACTGGTGCTCCGAGGCCCATCTGGCTTTTATTTCAGATTaGGGGATACAGAAGGATGCA +
Preference number: 5 (lower is better)
Translates to: GHRKRLLGVSDWCSEAHLAFISD*GIQKDA
Trigger: TGCATCCTTCTGTATCCCCAAATCTGAAATAAAAGC...CAGATGGGCCTCGGAGCACCAGTCACTTACTCCAAGAAGTCGTTTCCTGTGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602346.5
CDS-3UTR CAA 90 bp GTTGCTGAGGACCAAGATCCAGACGAGACTGACAGAGCTTCTATTCCCCGGCACTTCCTTCCAAAAGCCTaGTTTCTCAGAAAACCTTTC +
Preference number: 5 (lower is better)
Translates to: VAEDQDPDETDRASIPRHFLPKA*FLRKPF
Trigger: GAAAGGTTTTCTGAGAAACAAGGCTTTTGGAAGGAA...GTGCCGGGGAATAGAAGCTCTGTCAGTCTCGTCTGGATCTTGGTCCTCAGCAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000527504.1
ENST00000602346.5
CDS-3UTR CAA 90 bp TCCACATGCGTCCTTTGTTCAGCCTCTCCATTTAGCTCTCACTTTCTGGATGCATGTGTGCAGCAGAAATaGGCGTCTCTGCACAAAGCT +
Preference number: 5 (lower is better)
Translates to: STCVLCSASPFSSHFLDACVQQK*ASLHKA
Trigger: AGCTTTGTGCAGAGACGCCAATTTCTGCTGCACACA...TGCATCCAGAAAGTGAGAGCTAAATGGAGAGGCTGAACAAAGGACGCATGTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602346.5
CDS-3UTR CAA 90 bp ATAAAATACATCCACAGCAGTTTACAACTCTGCCATGATGTCATTTTGTCAGATCCACAGCTCGGGGCTTaGTCACCCCAGCACACCTGG +
Preference number: 5 (lower is better)
Translates to: IKYIHSSLQLCHDVILSDPQLGA*SPQHTW
Trigger: CCAGGTGTGCTGGGGTGACAAAGCCCCGAGCTGTGG...ATCTGACAAAATGACATCATGGCAGAGTTGTAAACTGCTGTGGATGTATTTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000602346.5
CDS-3UTR CAA 90 bp TCAGCGCTGGAGCCATTTCTCGACGGTGCTTTCTGTTTGTTTGTTTGTTTTTGTGCTTCTCCTCATTTGTaGTTAGGGCCAGTCCCTAAG +
Preference number: 5 (lower is better)
Translates to: SALEPFLDGAFCLFVCFCASPHL*LGPVPK
Trigger: CTTAGGGACTGGCCCTAACAACAAATGAGGAGAAGC...ACAAAAACAAACAAACAAACAGAAAGCACCGTCGAGAAATGGCTCCAGCGCTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000531399.6
ENST00000602346.5
CDS-3UTR CAA 90 bp GGATCCAGACAGTTGCTGAGGACCAAGATCCAGACGAGACTGACAGAGCTTCTAATGCTCTCAACAGCTTaGCAGAAACTAAAGTTGGAA +
Preference number: 5 (lower is better)
Translates to: GSRQLLRTKIQTRLTELLMLSTA*QKLKLE
Trigger: TTCCAACTTTAGTTTCTGCAAAGCTGTTGAGAGCAT...TAGAAGCTCTGTCAGTCTCGTCTGGATCTTGGTCCTCAGCAACTGTCTGGATCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602346.5
CDS-3UTR CAA 90 bp AGATTTGGGGATACAGAAGGATGCAAAATGAGGCAACCTAGCCACCCAACTGGCGCTTTTATTTCAGATTaGGGGATACAGAAGGATGCA +
Preference number: 5 (lower is better)
Translates to: RFGDTEGCKMRQPSHPTGAFISD*GIQKDA
Trigger: TGCATCCTTCTGTATCCCCAAATCTGAAATAAAAGC...GCCAGTTGGGTGGCTAGGTTGCCTCATTTTGCATCCTTCTGTATCCCCAAATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000531399.6
ENST00000602346.5
CDS-3UTR CAA 90 bp TCAGCGCTGGAGCCATTTCTCGACGGTGCTTTCTGTTTGTTTGTTTGTTTTTGTCAGAAAGCAGAGAACTaGGCTTCTCCTCATTTGTTG +
Preference number: 5 (lower is better)
Translates to: SALEPFLDGAFCLFVCFCQKAEN*ASPHLL
Trigger: CAACAAATGAGGAGAAGCCAAGTTCTCTGCTTTCTG...ACAAAAACAAACAAACAAACAGAAAGCACCGTCGAGAAATGGCTCCAGCGCTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000531399.6
ENST00000602346.5
CDS-3UTR CAA 90 bp AGCCATTTCTCGACGGTGCTTTCTGTTTGTTTGTTTGTTTTTGTTTTGAGATGGTCAGGATCCAGACAGTaGCTGAGGACCAAGATCCAG +
Preference number: 5 (lower is better)
Translates to: SHFSTVLSVCLFVFVLRWSGSRQ*LRTKIQ
Trigger: CTGGATCTTGGTCCTCAGCAACTGTCTGGATCCTGA...CCATCTCAAAACAAAAACAAACAAACAAACAGAAAGCACCGTCGAGAAATGGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000531399.6
ENST00000602346.5
CDS-3UTR CAA 90 bp CACTTAATTCTATCACGGCCCACACCCATGAATTCACTAAGTAATTATCACACATCCAAATCTGTCCTATaGTCCAGCATCCTATGGCCC +
Preference number: 5 (lower is better)
Translates to: HLILSRPTPMNSLSNYHTSKSVL*SSILWP
Trigger: GGGCCATAGGATGCTGGACAATAGGACAGATTTGGA...TGTGTGATAATTACTTAGTGAATTCATGGGTGTGGGCCGTGATAGAATTAAGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602346.5
CDS-3UTR CAA 90 bp AGCCATTTCTCGACGGTGCTTTCTGTTTGTTTGTTTGTTTTTGTTTTGAGATGGTGGGTGTCAATTAGCTaGGCTGTAGTGACCACTCTT +
Preference number: 5 (lower is better)
Translates to: SHFSTVLSVCLFVFVLRWWVSIS*AVVTTL
Trigger: AAGAGTGGTCACTACAGCCAAGCTAATTGACACCCA...CCATCTCAAAACAAAAACAAACAAACAAACAGAAAGCACCGTCGAGAAATGGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000602346.5
CDS-3UTR CAA 90 bp AAATATGCTAATGATAACAGTAAGATATGTAGGACATACTACGTACAGGTGCTGCCTCTTGAAATTGACTaGAAGGTGTTTACCTTGCAG +
Preference number: 5 (lower is better)
Translates to: KYANDNSKICRTYYVQVLPLEID*KVFTLQ
Trigger: CTGCAAGGTAAACACCTTCAAGTCAATTTCAAGAGG...CAGCACCTGTACGTAGTATGTCCTACATATCTTACTGTTATCATTAGCATATTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602346.5
CDS CAA 72 bp GCTCCTTGCGGGGCATGGCTGAGTTCCTGCCTGTCCTaGGCAGGCCCGCAGTGGTGGGGTGGCTCAGGCAGT +
Preference number: 6 (lower is better)
Translates to: APCGAWLSSCLS*AGPQWWGGSGS
Trigger: ACTGCCTGAGCCACCCCACCACTGCGGGCCTGCCAAGGACAGGCAGGAACTCAGCCATGCCCCGCAAGGAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000525390.1
ENST00000527504.1
ENST00000602346.5
CDS CCA 72 bp TTCACAACCAGTGCTGCTGGGGGTGAAGGCAACGGGTaGGTGAGCACGGACAGTGTGAGCCACGTGGCCGGG +
Preference number: 6 (lower is better)
Translates to: FTTSAAGGEGNG*VSTDSVSHVAG
Trigger: CCCGGCCACGTGGCTCACACTGTCCGTGCTCACCCACCCGTTGCCTTCACCCCCAGCAGCACTGGTTGTGAA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000525390.1
ENST00000527504.1
ENST00000602346.5
CDS TCA 72 bp TCAGGGACAAGGTGGCCTTATACCAAGCCAAAGTGCTaGGGGCGCAGGGAGACCCGCGAGACAGGGCCCCCT +
Preference number: 6 (lower is better)
Translates to: SGTRWPYTKPKC*GRRETRETGPP
Trigger: AGGGGGCCCTGTCTCGCGGGTCTCCCTGCGCCCTCAGCACTTTGGCTTGGTATAAGGCCACCTTGTCCCTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000602346.5
CDS GCA 72 bp AACTTGGGATGTCGGCACCACGGTGAGAGCAGAGTCTaGCCGGGGCTGTGGCAGGCAAAAGACCGTCTCGGT +
Preference number: 6 (lower is better)
Translates to: NLGCRHHGESRV*PGLWQAKDRLG
Trigger: ACCGAGACGGTCTTTTGCCTGCCACAGCCCCGGGCAGACTCTGCTCTCACCGTGGTGCCGACATCCCAAGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000525390.1
ENST00000527504.1
ENST00000602346.5
CDS CAA 90 bp CTGAGGACCCAGATGCTGTCACTGGGTCCTGGTGAGTCTGAAAACTaGGGATGTCGGCACCACGGTGAGAGCAGAGTCTGCCCGGGGCTG +
Preference number: 6 (lower is better)
Translates to: LRTQMLSLGPGESEN*GCRHHGESRVCPGL
Trigger: CAGCCCCGGGCAGACTCTGCTCTCACCGTGGTGCCGACATCCCAAGTTTTCAGACTCACCAGGACCCAGTGACAGCATCTGGGTCCTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000525390.1
ENST00000527504.1
ENST00000602346.5
CDS CCA 72 bp CTGAGTTCCTGCCTGTCCTTGGCAGGCCCGCAGTGGTaGGGTGGCTCAGGCAGTTACCCTTTTCACAACCAG +
Preference number: 6 (lower is better)
Translates to: LSSCLSLAGPQW*GGSGSYPFHNQ
Trigger: CTGGTTGTGAAAAGGGTAACTGCCTGAGCCACCCCACCACTGCGGGCCTGCCAAGGACAGGCAGGAACTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525390.1
ENST00000527504.1
ENST00000602346.5
CDS GCA 72 bp GCTCTGTCCAATGCTCTGAACTGGGGACAGTCCGCATaGAGCTCTGAGGACCCAGATGCTGTCACTGGGTCC +
Preference number: 6 (lower is better)
Translates to: ALSNALNWGQSA*SSEDPDAVTGS
Trigger: GGACCCAGTGACAGCATCTGGGTCCTCAGAGCTGCATGCGGACTGTCCCCAGTTCAGAGCATTGGACAGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525390.1
ENST00000527504.1
ENST00000602346.5
CDS TCA 72 bp ATCAGGGCTGTCAGTTCCCAGCTCTGTCCAATGCTCTaGACTGGGGACAGTCCGCATGCAGCTCTGAGGACC +
Preference number: 6 (lower is better)
Translates to: IRAVSSQLCPML*TGDSPHAALRT
Trigger: GGTCCTCAGAGCTGCATGCGGACTGTCCCCAGTTCAGAGCATTGGACAGAGCTGGGAACTGACAGCCCTGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525390.1
ENST00000527504.1
ENST00000602346.5
CDS CAA 90 bp GGGAGGCCCTGTCTGCAGAAAGCAGAGAACTTGGCTTCTCCTCATTaGTTGTTAGGGCCAGTCCCTAAGGGACTGCCTCCTAGGAGTCGG +
Preference number: 6 (lower is better)
Translates to: GRPCLQKAENLASPH*LLGPVPKGLPPRSR
Trigger: CCGACTCCTAGGAGGCAGTCCCTTAGGGACTGGCCCTAACAACAAATGAGGAGAAGCCAAGTTCTCTGCTTTCTGCAGACAGGGCCTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000458238.6
ENST00000525390.1
ENST00000531399.6
ENST00000602346.5
CDS TCA 72 bp ACTAAGGGATCTGAAACCCAGCCAGGTGTGTGTGTCTaGGCCCTGCCATTCGGAGGCATCACCGAGAGGTTC +
Preference number: 6 (lower is better)
Translates to: TKGSETQPGVCV*ALPFGGITERF
Trigger: GAACCTCTCGGTGATGCCTCCGAATGGCAGGGCTCAGACACACACACCTGGCTGGGTTTCAGATCCCTTAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000458238.6
ENST00000530777.5
ENST00000531399.6
CDS CAA 72 bp CAGATGCTGTCACTGGGTCCTGGTGAGTCTGAAAACTaGGGATGTCGGCACCACGGTGAGAGCAGAGTCTGC +
Preference number: 6 (lower is better)
Translates to: QMLSLGPGESEN*GCRHHGESRVC
Trigger: GCAGACTCTGCTCTCACCGTGGTGCCGACATCCCAAGTTTTCAGACTCACCAGGACCCAGTGACAGCATCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525390.1
ENST00000527504.1
ENST00000602346.5
CDS CAA 90 bp AGGCCCTGTCTGCAGAAAGCAGAGAACTTGGCTTCTCCTCATTTGTaGTTAGGGCCAGTCCCTAAGGGACTGCCTCCTAGGAGTCGGAGG +
Preference number: 6 (lower is better)
Translates to: RPCLQKAENLASPHL*LGPVPKGLPPRSRR
Trigger: CCTCCGACTCCTAGGAGGCAGTCCCTTAGGGACTGGCCCTAACAACAAATGAGGAGAAGCCAAGTTCTCTGCTTTCTGCAGACAGGGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000458238.6
ENST00000525390.1
ENST00000531399.6
ENST00000602346.5
CDS TCA 72 bp GTTGCCCTGGGGCTTTCAACTCCCAGAATTTCAGGATaGGGCAGCTCTGCACACAGGCCAGGCAAGCTCTTA +
Preference number: 6 (lower is better)
Translates to: VALGLSTPRISG*GSSAHRPGKLL
Trigger: TAAGAGCTTGCCTGGCCTGTGTGCAGAGCTGCCTCATCCTGAAATTCTGGGAGTTGAAAGCCCCAGGGCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458238.6
CDS CAA 90 bp GAAGATCCCATCCAGGGGAGGCCCTGTCTGCAGAAAGCAGAGAACTaGGCTTCTCCTCATTTGTTGTTAGGGCCAGTCCCTAAGGGACTG +
Preference number: 6 (lower is better)
Translates to: EDPIQGRPCLQKAEN*ASPHLLLGPVPKGL
Trigger: CAGTCCCTTAGGGACTGGCCCTAACAACAAATGAGGAGAAGCCAAGTTCTCTGCTTTCTGCAGACAGGGCCTCCCCTGGATGGGATCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000458238.6
ENST00000525390.1
ENST00000531399.6
ENST00000602346.5
CDS CAA 72 bp AGAGACCTAGACCAAGGCCTGTCAGGATCCAGACAGTaGCTGAGGACCAAGATCCAGACGAGACTGACAGAG +
Preference number: 6 (lower is better)
Translates to: RDLDQGLSGSRQ*LRTKIQTRLTE
Trigger: CTCTGTCAGTCTCGTCTGGATCTTGGTCCTCAGCAACTGTCTGGATCCTGACAGGCCTTGGTCTAGGTCTCT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531399.6
CDS CAA 72 bp CTGCAGAAAGCAGAGAACTTGGCTTCTCCTCATTTGTaGTTAGGGCCAGTCCCTAAGGGACTGCCTCCTAGG +
Preference number: 6 (lower is better)
Translates to: LQKAENLASPHL*LGPVPKGLPPR
Trigger: CCTAGGAGGCAGTCCCTTAGGGACTGGCCCTAACAACAAATGAGGAGAAGCCAAGTTCTCTGCTTTCTGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000458238.6
ENST00000525390.1
ENST00000531399.6
ENST00000602346.5
CDS CAA 72 bp AGGCAAGCTCTTACTGCACTGTCAGGATCCAGACAGTaGCTGAGGACCAAGATCCAGACGAGACTGACAGAG +
Preference number: 6 (lower is better)
Translates to: RQALTALSGSRQ*LRTKIQTRLTE
Trigger: CTCTGTCAGTCTCGTCTGGATCTTGGTCCTCAGCAACTGTCTGGATCCTGACAGTGCAGTAAGAGCTTGCCT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458238.6
CDS CAA 90 bp ACACAGGCCAGGCAAGCTCTTACTGCACTGTCAGGATCCAGACAGTaGCTGAGGACCAAGATCCAGACGAGACTGACAGAGCTTCTATTC +
Preference number: 6 (lower is better)
Translates to: TQARQALTALSGSRQ*LRTKIQTRLTELLF
Trigger: GAATAGAAGCTCTGTCAGTCTCGTCTGGATCTTGGTCCTCAGCAACTGTCTGGATCCTGACAGTGCAGTAAGAGCTTGCCTGGCCTGTGT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458238.6
CDS GCA 72 bp GGCCAGCTCGCTGTATGTGCACATCGTTTCCATGTGTaGAGCAGAAATTGGCGTCTCTGCACAAAGCTGATT +
Preference number: 6 (lower is better)
Translates to: GQLAVCAHRFHV*SRNWRLCTKLI
Trigger: AATCAGCTTTGTGCAGAGACGCCAATTTCTGCTGCACACATGGAAACGATGTGCACATACAGCGAGCTGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602346.5
CDS CAA 72 bp TGTCTGCAGAAAGCAGAGAACTTGGCTTCTCCTCATTaGTTGTTAGGGCCAGTCCCTAAGGGACTGCCTCCT +
Preference number: 6 (lower is better)
Translates to: CLQKAENLASPH*LLGPVPKGLPP
Trigger: AGGAGGCAGTCCCTTAGGGACTGGCCCTAACAACAAATGAGGAGAAGCCAAGTTCTCTGCTTTCTGCAGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000458238.6
ENST00000525390.1
ENST00000531399.6
ENST00000602346.5
CDS CCA 72 bp GTATGTGCACATCGTTTCCATGTGTGCAGCAGAAATTaGCGTCTCTGCACAAAGCTGATTTTAGTCTTTCTC +
Preference number: 6 (lower is better)
Translates to: VCAHRFHVCSRN*RLCTKLILVFL
Trigger: GAGAAAGACTAAAATCAGCTTTGTGCAGAGACGCCAATTTCTGCTGCACACATGGAAACGATGTGCACATAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602346.5
CDS CAA 72 bp TGTATGTGCACATCGTTTCCATGTGTGCAGCAGAAATaGGCGTCTCTGCACAAAGCTGATTTTAGTCTTTCT +
Preference number: 6 (lower is better)
Translates to: CMCTSFPCVQQK*ASLHKADFSLS
Trigger: AGAAAGACTAAAATCAGCTTTGTGCAGAGACGCCAATTTCTGCTGCACACATGGAAACGATGTGCACATACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602346.5