RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TOX2 (Homo sapiens)

Ensembl gene IDs: ENSG00000124191

Ensembl transcript IDs: ENST00000341197.9, ENST00000358131.5, ENST00000372999.5, ENST00000413823.1, ENST00000423191.6, ENST00000435864.2

Found 566 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CATAGGGTACCGTGCGCAGGGCGAGGACAGGGTCCACAGTTACCCTaGAGCAAGCAGGTCAGCGGGCGGAAGGTTCCTGCAGGTTCTTTG +
Preference number: 1 (lower is better)
Translates to: HRVPCAGRGQGPQLP*SKQVSGRKVPAGSL
Trigger: CAAAGAACCTGCAGGAACCTTCCGCCCGCTGACCTGCTTGCTCCAGGGTAACTGTGGACCCTGTCCTCGCCCTGCGCACGGTACCCTATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
3UTR GCA 90 bp AGCACTGGGCACCAAGACAGACACTCGCCAGGGCCAGGAAACAGCTaGAAACGACGTCAAGAACCCAAACCCAAACGAAACCCCAAAACC +
Preference number: 1 (lower is better)
Translates to: STGHQDRHSPGPGNS*KRRQEPKPKRNPKT
Trigger: GGTTTTGGGGTTTCGTTTGGGTTTGGGTTCTTGACGTCGTTTGCAGCTGTTTCCTGGCCCTGGCGAGTGTCTGTCTTGGTGCCCAGTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000413823.1
3UTR-3UTR GCA 90 bp GGGTGGGTGTCCGTTGGTAAGCGACCCCGCCAGGGGCGGCCCACCTGGGCTGGGTCCGATGGGCCACCCTaGCTCTGGCCAGGGCCTCTT +
Preference number: 2 (lower is better)
Translates to: GWVSVGKRPRQGRPTWAGSDGPP*LWPGPL
Trigger: AAGAGGCCCTGGCCAGAGGCAGGGTGGCCCATCGGA...CCCAGCCCAGGTGGGCCGCCCCTGGCGGGGTCGCTTACCAACGGACACCCACCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
3UTR-3UTR GCA 90 bp GGGTGGGTGTCCGTTGGTAAGCGACCCCGCCAGGGGCGGCCCACCTGGGCTGGGTGGTGGGCAGTGGGCTaGCTCTGCAGAGTCTGGTGG +
Preference number: 2 (lower is better)
Translates to: GWVSVGKRPRQGRPTWAGWWAVG*LCRVWW
Trigger: CCACCAGACTCTGCAGAGGCAGCCCACTGCCCACCA...CCCAGCCCAGGTGGGCCGCCCCTGGCGGGGTCGCTTACCAACGGACACCCACCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
3UTR-3UTR GCA 90 bp GGGTGGGTGTCCGTTGGTAAGCGACCCCGCCAGGGGCGGCCCACCTGGGCTGGGTCAGGCTCTGAGCAGTaGCTTCCAGCGAGCCTCAGG +
Preference number: 2 (lower is better)
Translates to: GWVSVGKRPRQGRPTWAGSGSEQ*LPASLR
Trigger: CCTGAGGCTCGCTGGAAGGCACTGCTCAGAGCCTGA...CCCAGCCCAGGTGGGCCGCCCCTGGCGGGGTCGCTTACCAACGGACACCCACCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
3UTR-3UTR GCA 90 bp CCCGGGCAATGGGTGTGTCACTGCTCTCTCCGATGGGCCACCCTGCCTCTGGCCTCAGGCTCTGAGCAGTaGCTTCCAGCGAGCCTCAGG +
Preference number: 2 (lower is better)
Translates to: PGQWVCHCSLRWATLPLASGSEQ*LPASLR
Trigger: CCTGAGGCTCGCTGGAAGGCACTGCTCAGAGCCTGA...GGCCAGAGGCAGGGTGGCCCATCGGAGAGAGCAGTGACACACCCATTGCCCGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000423191.6
3UTR-3UTR GCA 90 bp GGGGCCGGGTGTCCAGACATAGGGTACCGTGCGCAGGGCGAGGACAGGGTCCACCAATGGGTGTGTCACTaGTCTCTCCGATGGGCCACC +
Preference number: 2 (lower is better)
Translates to: GAGCPDIGYRAQGEDRVHQWVCH*SLRWAT
Trigger: GGTGGCCCATCGGAGAGAGCAGTGACACACCCATTG...GTGGACCCTGTCCTCGCCCTGCGCACGGTACCCTATGTCTGGACACCCGGCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
3UTR-3UTR CCA 90 bp GGAGAGCAGTGCTCCGGGGTGGCTAGCAAGCGTCCGGTCCTTGCTGTGAGGATGCACTGCTCTCTCCGATaGGCCACCCTGCCTCTGGCC +
Preference number: 2 (lower is better)
Translates to: GEQCSGVASKRPVLAVRMHCSLR*ATLPLA
Trigger: GGCCAGAGGCAGGGTGGCCCATCGGAGAGAGCAGTG...CATCCTCACAGCAAGGACCGGACGCTTGCTAGCCACCCCGGAGCACTGCTCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
3UTR-3UTR CCA 90 bp TTTGAGAGAAGCACTGGGCACCAAGACAGACACTCGCCAGGGCCAGGAAACAGCCGGGGGCCGGCCCTCTaGCCCATGCATCTGGGGTGG +
Preference number: 2 (lower is better)
Translates to: FERSTGHQDRHSPGPGNSRGPAL*PMHLGW
Trigger: CCACCCCAGATGCATGGGCCAGAGGGCCGGCCCCCG...GCTGTTTCCTGGCCCTGGCGAGTGTCTGTCTTGGTGCCCAGTGCTTCTCTCAAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000413823.1
3UTR-3UTR TCA 90 bp CGAGGACAGGGTCCACAGTTACCCTGGAGCAAGCAGGTCAGCGGGCGGAAGGTTCAGCCCTTCAGGCTCTaGGCAGTGCCTTCCAGCGAG +
Preference number: 2 (lower is better)
Translates to: RGQGPQLPWSKQVSGRKVQPFRL*AVPSSE
Trigger: CTCGCTGGAAGGCACTGCTCAGAGCCTGAAGGGCTG...AACCTTCCGCCCGCTGACCTGCTTGCTCCAGGGTAACTGTGGACCCTGTCCTCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
3UTR-3UTR GCA 90 bp TCCAGACATAGGGTACCGTGCGCAGGGCGAGGACAGGGTCCACAGTTACCCTGGTGGTGGGCAGTGGGCTaGCTCTGCAGAGTCTGGTGG +
Preference number: 2 (lower is better)
Translates to: SRHRVPCAGRGQGPQLPWWWAVG*LCRVWW
Trigger: CCACCAGACTCTGCAGAGGCAGCCCACTGCCCACCA...CCAGGGTAACTGTGGACCCTGTCCTCGCCCTGCGCACGGTACCCTATGTCTGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
3UTR-3UTR CCA 90 bp CCGGCCCTCTGGCCCATGCATCTGGGGTGGGTGTCCGTTGGTAAGCGACCCCGCCTCTGCAGAGTCTGGTaGGAGGTTGAGGAAGAGACT +
Preference number: 2 (lower is better)
Translates to: PALWPMHLGWVSVGKRPRLCRVW*EVEEET
Trigger: AGTCTCTTCCTCAACCTCCCACCAGACTCTGCAGAG...GCGGGGTCGCTTACCAACGGACACCCACCCCAGATGCATGGGCCAGAGGGCCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
3UTR-3UTR CCA 90 bp CGAGGACAGGGTCCACAGTTACCCTGGAGCAAGCAGGTCAGCGGGCGGAAGGTTGGTTCTTTGGGCTGGTaGTGGGCAGTGGGCTGCCTC +
Preference number: 2 (lower is better)
Translates to: RGQGPQLPWSKQVSGRKVGSLGW*WAVGCL
Trigger: GAGGCAGCCCACTGCCCACCACCAGCCCAAAGAACC...AACCTTCCGCCCGCTGACCTGCTTGCTCCAGGGTAACTGTGGACCCTGTCCTCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
3UTR-3UTR TCA 90 bp TTGAGGAAGAGACTCAGCCCCCGGGCAATGGGTGTGTCACTGCTCTCTCCGATGCAGCCCTTCAGGCTCTaGGCAGTGCCTTCCAGCGAG +
Preference number: 2 (lower is better)
Translates to: LRKRLSPRAMGVSLLSPMQPFRL*AVPSSE
Trigger: CTCGCTGGAAGGCACTGCTCAGAGCCTGAAGGGCTG...CATCGGAGAGAGCAGTGACACACCCATTGCCCGGGGGCTGAGTCTCTTCCTCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000423191.6
3UTR-3UTR GCA 90 bp CTGGAGCAAGCAGGTCAGCGGGCGGAAGGTTCCTGCAGGTTCTTTGGGCTGGTGCCAGGGCCTCTTTTCTaGTGTCAGCCCTTCAGGCTC +
Preference number: 2 (lower is better)
Translates to: LEQAGQRAEGSCRFFGLVPGPLF*CQPFRL
Trigger: GAGCCTGAAGGGCTGACAGCAGAAAAGAGGCCCTGG...CACCAGCCCAAAGAACCTGCAGGAACCTTCCGCCCGCTGACCTGCTTGCTCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
3UTR-3UTR GCA 90 bp CAAGACAGACACTCGCCAGGGCCAGGAAACAGCTGCAAACGACGTCAAGAACCCTCCGATGGGCCACCCTaGCTCTGGCCAGGGCCTCTT +
Preference number: 2 (lower is better)
Translates to: QDRHSPGPGNSCKRRQEPSDGPP*LWPGPL
Trigger: AAGAGGCCCTGGCCAGAGGCAGGGTGGCCCATCGGA...GGGTTCTTGACGTCGTTTGCAGCTGTTTCCTGGCCCTGGCGAGTGTCTGTCTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
3UTR-3UTR GCA 90 bp CACTGGGCACCAAGACAGACACTCGCCAGGGCCAGGAAACAGCTGCAAACGACGCGGGCGGAAGGTTCCTaGAGGTTCTTTGGGCTGGTG +
Preference number: 2 (lower is better)
Translates to: HWAPRQTLARARKQLQTTRAEGS*RFFGLV
Trigger: CACCAGCCCAAAGAACCTGCAGGAACCTTCCGCCCG...CGTCGTTTGCAGCTGTTTCCTGGCCCTGGCGAGTGTCTGTCTTGGTGCCCAGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
3UTR-3UTR GCA 90 bp CACTGGGCACCAAGACAGACACTCGCCAGGGCCAGGAAACAGCTGCAAACGACGAGACATAGGGTACCGTaGGCAGGGCGAGGACAGGGT +
Preference number: 2 (lower is better)
Translates to: HWAPRQTLARARKQLQTTRHRVP*AGRGQG
Trigger: ACCCTGTCCTCGCCCTGCGCACGGTACCCTATGTCT...CGTCGTTTGCAGCTGTTTCCTGGCCCTGGCGAGTGTCTGTCTTGGTGCCCAGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000413823.1
3UTR-3UTR CCA 90 bp TCCGGGGTGGCTAGCAAGCGTCCGGTCCTTGCTGTGAGGATGACGAAACGGTTTTCTTTGGGCTGGTGGTaGGCAGTGGGCTGCCTCTGC +
Preference number: 2 (lower is better)
Translates to: SGVASKRPVLAVRMTKRFSLGWW*AVGCLC
Trigger: GCAGAGGCAGCCCACTGCCCACCACCAGCCCAAAGA...AAACCGTTTCGTCATCCTCACAGCAAGGACCGGACGCTTGCTAGCCACCCCGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
3UTR-3UTR GCA 90 bp CACAGTTACCCTGGAGCAAGCAGGTCAGCGGGCGGAAGGTTCCTGCAGGTTCTTGCAGTGGGCTGCCTCTaGAGAGTCTGGTGGGAGGTT +
Preference number: 2 (lower is better)
Translates to: HSYPGASRSAGGRFLQVLAVGCL*RVWWEV
Trigger: AACCTCCCACCAGACTCTGCAGAGGCAGCCCACTGC...AAGAACCTGCAGGAACCTTCCGCCCGCTGACCTGCTTGCTCCAGGGTAACTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
3UTR-3UTR GCA 90 bp TGCTGTGAGGATGACGAAACGGTTTGGCAGCCGCTTTTGTGCGCGTCTCCCTTACGATGTGCACATCTATaGCGGGGGCCGGCCCTCTGG +
Preference number: 2 (lower is better)
Translates to: CCEDDETVWQPLLCASPLRCAHL*RGPALW
Trigger: CCAGAGGGCCGGCCCCCGGCATAGATGTGCACATCG...TAAGGGAGACGCGCACAAAAGCGGCTGCCAAACCGTTTCGTCATCCTCACAGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000413823.1
3UTR-3UTR GCA 90 bp CACTCGCCAGGGCCAGGAAACAGCTGCAAACGACGTCAAGAACCCAAACCCAAACGATGTGCACATCTATaGCGGGGGCCGGCCCTCTGG +
Preference number: 2 (lower is better)
Translates to: HSPGPGNSCKRRQEPKPKRCAHL*RGPALW
Trigger: CCAGAGGGCCGGCCCCCGGCATAGATGTGCACATCG...TTTGGGTTTGGGTTCTTGACGTCGTTTGCAGCTGTTTCCTGGCCCTGGCGAGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000413823.1
3UTR-3UTR CCA 90 bp CAGACACTCGCCAGGGCCAGGAAACAGCTGCAAACGACGTCAAGAACCCAAACCTCTTTGGGCTGGTGGTaGGCAGTGGGCTGCCTCTGC +
Preference number: 2 (lower is better)
Translates to: QTLARARKQLQTTSRTQTSLGWW*AVGCLC
Trigger: GCAGAGGCAGCCCACTGCCCACCACCAGCCCAAAGA...GGTTTGGGTTCTTGACGTCGTTTGCAGCTGTTTCCTGGCCCTGGCGAGTGTCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
3UTR-3UTR GCA 90 bp TTTGAGAGAAGCACTGGGCACCAAGACAGACACTCGCCAGGGCCAGGAAACAGCTCAGGCTCTGAGCAGTaGCTTCCAGCGAGCCTCAGG +
Preference number: 2 (lower is better)
Translates to: FERSTGHQDRHSPGPGNSSGSEQ*LPASLR
Trigger: CCTGAGGCTCGCTGGAAGGCACTGCTCAGAGCCTGA...GCTGTTTCCTGGCCCTGGCGAGTGTCTGTCTTGGTGCCCAGTGCTTCTCTCAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
3UTR-3UTR GCA 90 bp AGACACTCGCCAGGGCCAGGAAACAGCTGCAAACGACGTCAAGAACCCAAACCCTCAGGCTCTGAGCAGTaGCTTCCAGCGAGCCTCAGG +
Preference number: 2 (lower is better)
Translates to: RHSPGPGNSCKRRQEPKPSGSEQ*LPASLR
Trigger: CCTGAGGCTCGCTGGAAGGCACTGCTCAGAGCCTGA...GGGTTTGGGTTCTTGACGTCGTTTGCAGCTGTTTCCTGGCCCTGGCGAGTGTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
3UTR-3UTR GCA 90 bp CAGGGCCAGGAAACAGCTGCAAACGACGTCAAGAACCCAAACCCAAACGAAACCTCCGATGGGCCACCCTaGCTCTGGCCAGGGCCTCTT +
Preference number: 2 (lower is better)
Translates to: QGQETAANDVKNPNPNETSDGPP*LWPGPL
Trigger: AAGAGGCCCTGGCCAGAGGCAGGGTGGCCCATCGGA...GGTTTCGTTTGGGTTTGGGTTCTTGACGTCGTTTGCAGCTGTTTCCTGGCCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
3UTR-3UTR CCA 90 bp GACAGACACTCGCCAGGGCCAGGAAACAGCTGCAAACGACGTCAAGAACCCAAATCTTTGGGCTGGTGGTaGGCAGTGGGCTGCCTCTGC +
Preference number: 2 (lower is better)
Translates to: DRHSPGPGNSCKRRQEPKSLGWW*AVGCLC
Trigger: GCAGAGGCAGCCCACTGCCCACCACCAGCCCAAAGA...TTTGGGTTCTTGACGTCGTTTGCAGCTGTTTCCTGGCCCTGGCGAGTGTCTGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
3UTR-3UTR CCA 90 bp CACTCGCCAGGGCCAGGAAACAGCTGCAAACGACGTCAAGAACCCAAACCCAAAGGTTCTTTGGGCTGGTaGTGGGCAGTGGGCTGCCTC +
Preference number: 2 (lower is better)
Translates to: HSPGPGNSCKRRQEPKPKGSLGW*WAVGCL
Trigger: GAGGCAGCCCACTGCCCACCACCAGCCCAAAGAACC...TTTGGGTTTGGGTTCTTGACGTCGTTTGCAGCTGTTTCCTGGCCCTGGCGAGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
3UTR-3UTR GCA 90 bp TTTGAGAGAAGCACTGGGCACCAAGACAGACACTCGCCAGGGCCAGGAAACAGCCAATGGGTGTGTCACTaGTCTCTCCGATGGGCCACC +
Preference number: 2 (lower is better)
Translates to: FERSTGHQDRHSPGPGNSQWVCH*SLRWAT
Trigger: GGTGGCCCATCGGAGAGAGCAGTGACACACCCATTG...GCTGTTTCCTGGCCCTGGCGAGTGTCTGTCTTGGTGCCCAGTGCTTCTCTCAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
3UTR-3UTR GCA 90 bp TGCTGTGAGGATGACGAAACGGTTTGGCAGCCGCTTTTGTGCGCGTCTCCCTTAGCAGTGGGCTGCCTCTaGAGAGTCTGGTGGGAGGTT +
Preference number: 2 (lower is better)
Translates to: CCEDDETVWQPLLCASPLAVGCL*RVWWEV
Trigger: AACCTCCCACCAGACTCTGCAGAGGCAGCCCACTGC...TAAGGGAGACGCGCACAAAAGCGGCTGCCAAACCGTTTCGTCATCCTCACAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
3UTR-3UTR GCA 90 bp AAGCGTCCGGTCCTTGCTGTGAGGATGACGAAACGGTTTGGCAGCCGCTTTTGTAGACATAGGGTACCGTaGGCAGGGCGAGGACAGGGT +
Preference number: 2 (lower is better)
Translates to: KRPVLAVRMTKRFGSRFCRHRVP*AGRGQG
Trigger: ACCCTGTCCTCGCCCTGCGCACGGTACCCTATGTCT...ACAAAAGCGGCTGCCAAACCGTTTCGTCATCCTCACAGCAAGGACCGGACGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000413823.1
3UTR-3UTR CCA 90 bp GACAGACACTCGCCAGGGCCAGGAAACAGCTGCAAACGACGTCAAGAACCCAAATCAGCCCCCGGGCAATaGGTGTGTCACTGCTCTCTC +
Preference number: 2 (lower is better)
Translates to: DRHSPGPGNSCKRRQEPKSAPGQ*VCHCSL
Trigger: GAGAGAGCAGTGACACACCCATTGCCCGGGGGCTGA...TTTGGGTTCTTGACGTCGTTTGCAGCTGTTTCCTGGCCCTGGCGAGTGTCTGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
3UTR-3UTR GCA 90 bp AGACACTCGCCAGGGCCAGGAAACAGCTGCAAACGACGTCAAGAACCCAAACCCACTGGAAAACCGATGTaGACATCTATGCCGGGGGCC +
Preference number: 2 (lower is better)
Translates to: RHSPGPGNSCKRRQEPKPTGKPM*TSMPGA
Trigger: GGCCCCCGGCATAGATGTGCACATCGGTTTTCCAGT...GGGTTTGGGTTCTTGACGTCGTTTGCAGCTGTTTCCTGGCCCTGGCGAGTGTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000413823.1
3UTR-3UTR CCA 90 bp TGCTGTGAGGATGACGAAACGGTTTGGCAGCCGCTTTTGTGCGCGTCTCCCTTACCCATGCATCTGGGGTaGGTGTCCGTTGGTAAGCGA +
Preference number: 2 (lower is better)
Translates to: CCEDDETVWQPLLCASPLPMHLG*VSVGKR
Trigger: TCGCTTACCAACGGACACCCACCCCAGATGCATGGG...TAAGGGAGACGCGCACAAAAGCGGCTGCCAAACCGTTTCGTCATCCTCACAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000413823.1
3UTR-3UTR GCA 90 bp TGCTGTGAGGATGACGAAACGGTTTGGCAGCCGCTTTTGTGCGCGTCTCCCTTAACTGGAAAACCGATGTaGACATCTATGCCGGGGGCC +
Preference number: 2 (lower is better)
Translates to: CCEDDETVWQPLLCASPLTGKPM*TSMPGA
Trigger: GGCCCCCGGCATAGATGTGCACATCGGTTTTCCAGT...TAAGGGAGACGCGCACAAAAGCGGCTGCCAAACCGTTTCGTCATCCTCACAGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000413823.1
3UTR-3UTR CCA 90 bp CAGACACTCGCCAGGGCCAGGAAACAGCTGCAAACGACGTCAAGAACCCAAACCCTCTGCAGAGTCTGGTaGGAGGTTGAGGAAGAGACT +
Preference number: 2 (lower is better)
Translates to: QTLARARKQLQTTSRTQTLCRVW*EVEEET
Trigger: AGTCTCTTCCTCAACCTCCCACCAGACTCTGCAGAG...GGTTTGGGTTCTTGACGTCGTTTGCAGCTGTTTCCTGGCCCTGGCGAGTGTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
3UTR-3UTR CCA 90 bp CAGGGCCAGGAAACAGCTGCAAACGACGTCAAGAACCCAAACCCAAACGAAACCTTCCTGCAGGTTCTTTaGGCTGGTGGTGGGCAGTGG +
Preference number: 2 (lower is better)
Translates to: QGQETAANDVKNPNPNETFLQVL*AGGGQW
Trigger: CCACTGCCCACCACCAGCCCAAAGAACCTGCAGGAA...GGTTTCGTTTGGGTTTGGGTTCTTGACGTCGTTTGCAGCTGTTTCCTGGCCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
3UTR-3UTR CCA 90 bp CAGGGCCAGGAAACAGCTGCAAACGACGTCAAGAACCCAAACCCAAACGAAACCCCCATGCATCTGGGGTaGGTGTCCGTTGGTAAGCGA +
Preference number: 2 (lower is better)
Translates to: QGQETAANDVKNPNPNETPMHLG*VSVGKR
Trigger: TCGCTTACCAACGGACACCCACCCCAGATGCATGGG...GGTTTCGTTTGGGTTTGGGTTCTTGACGTCGTTTGCAGCTGTTTCCTGGCCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000413823.1
3UTR-3UTR TCA 90 bp TTCAGCACAGTTCTAAAACACGTAGTCAACTACTTACACGGAACCAACAGTTTCCAGCCCTTCAGGCTCTaGGCAGTGCCTTCCAGCGAG +
Preference number: 2 (lower is better)
Translates to: FSTVLKHVVNYLHGTNSFQPFRL*AVPSSE
Trigger: CTCGCTGGAAGGCACTGCTCAGAGCCTGAAGGGCTG...GAAACTGTTGGTTCCGTGTAAGTAGTTGACTACGTGTTTTAGAACTGTGCTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
3UTR-3UTR CCA 90 bp GTCTTCAGCACAGTTCTAAAACACGTAGTCAACTACTTACACGGAACCAACAGTTCAGCCCCCGGGCAATaGGTGTGTCACTGCTCTCTC +
Preference number: 2 (lower is better)
Translates to: VFSTVLKHVVNYLHGTNSSAPGQ*VCHCSL
Trigger: GAGAGAGCAGTGACACACCCATTGCCCGGGGGCTGA...ACTGTTGGTTCCGTGTAAGTAGTTGACTACGTGTTTTAGAACTGTGCTGAAGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
3UTR-3UTR CCA 90 bp TTTGAGAGAAGCACTGGGCACCAAGACAGACACTCGCCAGGGCCAGGAAACAGCATCTTTTGTTCACACTaGAAAACCGATGTGCACATC +
Preference number: 2 (lower is better)
Translates to: FERSTGHQDRHSPGPGNSIFCSH*KTDVHI
Trigger: GATGTGCACATCGGTTTTCCAGTGTGAACAAAAGAT...GCTGTTTCCTGGCCCTGGCGAGTGTCTGTCTTGGTGCCCAGTGCTTCTCTCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000413823.1
3UTR-3UTR CCA 90 bp AGACACTCGCCAGGGCCAGGAAACAGCTGCAAACGACGTCAAGAACCCAAACCCATCTTTTGTTCACACTaGAAAACCGATGTGCACATC +
Preference number: 2 (lower is better)
Translates to: RHSPGPGNSCKRRQEPKPIFCSH*KTDVHI
Trigger: GATGTGCACATCGGTTTTCCAGTGTGAACAAAAGAT...GGGTTTGGGTTCTTGACGTCGTTTGCAGCTGTTTCCTGGCCCTGGCGAGTGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000413823.1
3UTR-3UTR GCA 90 bp TTCAGCACAGTTCTAAAACACGTAGTCAACTACTTACACGGAACCAACAGTTTCGCAGTGGGCTGCCTCTaGAGAGTCTGGTGGGAGGTT +
Preference number: 2 (lower is better)
Translates to: FSTVLKHVVNYLHGTNSFAVGCL*RVWWEV
Trigger: AACCTCCCACCAGACTCTGCAGAGGCAGCCCACTGC...GAAACTGTTGGTTCCGTGTAAGTAGTTGACTACGTGTTTTAGAACTGTGCTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
3UTR-3UTR CCA 90 bp GTCTTCAGCACAGTTCTAAAACACGTAGTCAACTACTTACACGGAACCAACAGTTTCCTGCAGGTTCTTTaGGCTGGTGGTGGGCAGTGG +
Preference number: 2 (lower is better)
Translates to: VFSTVLKHVVNYLHGTNSFLQVL*AGGGQW
Trigger: CCACTGCCCACCACCAGCCCAAAGAACCTGCAGGAA...ACTGTTGGTTCCGTGTAAGTAGTTGACTACGTGTTTTAGAACTGTGCTGAAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
3UTR CAA 90 bp TCAACTACTTACACGGAACCAACAGTTTCTAGGTTTCGTAATCTTTaGTTCACACTGGAAAACCGATGTGCACATCTATGCCGGGGGCCG +
Preference number: 2 (lower is better)
Translates to: STTYTEPTVSRFRNL*FTLENRCAHLCRGP
Trigger: CGGCCCCCGGCATAGATGTGCACATCGGTTTTCCAGTGTGAACAAAAGATTACGAAACCTAGAAACTGTTGGTTCCGTGTAAGTAGTTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000413823.1
3UTR GCA 72 bp GGAAGAGACTCAGCCCCCGGGCAATGGGTGTGTCACTaGTCTCTCCGATGGGCCACCCTGCCTCTGGCCAGG +
Preference number: 3 (lower is better)
Translates to: GRDSAPGQWVCH*SLRWATLPLAR
Trigger: CCTGGCCAGAGGCAGGGTGGCCCATCGGAGAGAGCAGTGACACACCCATTGCCCGGGGGCTGAGTCTCTTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000423191.6
3UTR GCA 72 bp TGGAGCTGGGGCCGGGTGTCCAGACATAGGGTACCGTaGGCAGGGCGAGGACAGGGTCCACAGTTACCCTGG +
Preference number: 3 (lower is better)
Translates to: WSWGRVSRHRVP*AGRGQGPQLPW
Trigger: CCAGGGTAACTGTGGACCCTGTCCTCGCCCTGCGCACGGTACCCTATGTCTGGACACCCGGCCCCAGCTCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
3UTR CCA 72 bp CCGTGCGCAGGGCGAGGACAGGGTCCACAGTTACCCTaGAGCAAGCAGGTCAGCGGGCGGAAGGTTCCTGCA +
Preference number: 3 (lower is better)
Translates to: PCAGRGQGPQLP*SKQVSGRKVPA
Trigger: TGCAGGAACCTTCCGCCCGCTGACCTGCTTGCTCCAGGGTAACTGTGGACCCTGTCCTCGCCCTGCGCACGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
3UTR CCA 72 bp GGGCGGAAGGTTCCTGCAGGTTCTTTGGGCTGGTGGTaGGCAGTGGGCTGCCTCTGCAGAGTCTGGTGGGAG +
Preference number: 3 (lower is better)
Translates to: GRKVPAGSLGWW*AVGCLCRVWWE
Trigger: CTCCCACCAGACTCTGCAGAGGCAGCCCACTGCCCACCACCAGCCCAAAGAACCTGCAGGAACCTTCCGCCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000423191.6
3UTR CCA 72 bp AGCGGGCGGAAGGTTCCTGCAGGTTCTTTGGGCTGGTaGTGGGCAGTGGGCTGCCTCTGCAGAGTCTGGTGG +
Preference number: 3 (lower is better)
Translates to: SGRKVPAGSLGW*WAVGCLCRVWW
Trigger: CCACCAGACTCTGCAGAGGCAGCCCACTGCCCACCACCAGCCCAAAGAACCTGCAGGAACCTTCCGCCCGCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
3UTR CCA 72 bp AACCGATGTGCACATCTATGCCGGGGGCCGGCCCTCTaGCCCATGCATCTGGGGTGGGTGTCCGTTGGTAAG +
Preference number: 3 (lower is better)
Translates to: NRCAHLCRGPAL*PMHLGWVSVGK
Trigger: CTTACCAACGGACACCCACCCCAGATGCATGGGCCAGAGGGCCGGCCCCCGGCATAGATGTGCACATCGGTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000413823.1
3UTR-3UTR CAA 90 bp GACACTCGCCAGGGCCAGGAAACAGCTGCAAACGACGTCAAGAACCCAAACCCATGGGGTGGGTGTCCGTaGGTAAGCGACCCCGCCAGG +
Preference number: 3 (lower is better)
Translates to: DTRQGQETAANDVKNPNPWGGCP*VSDPAR
Trigger: CCTGGCGGGGTCGCTTACCAACGGACACCCACCCCA...TGGGTTTGGGTTCTTGACGTCGTTTGCAGCTGTTTCCTGGCCCTGGCGAGTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000413823.1
3UTR-3UTR CAA 90 bp CACTGGGCACCAAGACAGACACTCGCCAGGGCCAGGAAACAGCTGCAAACGACGGAGTCTGGTGGGAGGTaGAGGAAGAGACTCAGCCCC +
Preference number: 3 (lower is better)
Translates to: HWAPRQTLARARKQLQTTESGGR*RKRLSP
Trigger: GGGGCTGAGTCTCTTCCTCAACCTCCCACCAGACTC...CGTCGTTTGCAGCTGTTTCCTGGCCCTGGCGAGTGTCTGTCTTGGTGCCCAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
3UTR GCA 72 bp CTCTTTTCTGCTGTCAGCCCTTCAGGCTCTGAGCAGTaGCTTCCAGCGAGCCTCAGGGATGGTAGGGAGGCG +
Preference number: 3 (lower is better)
Translates to: LFSAVSPSGSEQ*LPASLRDGREA
Trigger: CGCCTCCCTACCATCCCTGAGGCTCGCTGGAAGGCACTGCTCAGAGCCTGAAGGGCTGACAGCAGAAAAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000423191.6
3UTR-3UTR CAA 90 bp GACACTCGCCAGGGCCAGGAAACAGCTGCAAACGACGTCAAGAACCCAAACCCAGAGTCTGGTGGGAGGTaGAGGAAGAGACTCAGCCCC +
Preference number: 3 (lower is better)
Translates to: DTRQGQETAANDVKNPNPESGGR*RKRLSP
Trigger: GGGGCTGAGTCTCTTCCTCAACCTCCCACCAGACTC...TGGGTTTGGGTTCTTGACGTCGTTTGCAGCTGTTTCCTGGCCCTGGCGAGTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
3UTR-3UTR CAA 90 bp CAGGGCCAGGAAACAGCTGCAAACGACGTCAAGAACCCAAACCCAAACGAAACCGTTTGGCAGCCGCTTTaGTGCGCGTCTCCCTTAAGA +
Preference number: 3 (lower is better)
Translates to: QGQETAANDVKNPNPNETVWQPL*CASPLR
Trigger: TCTTAAGGGAGACGCGCACAAAAGCGGCTGCCAAAC...GGTTTCGTTTGGGTTTGGGTTCTTGACGTCGTTTGCAGCTGTTTCCTGGCCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000413823.1
3UTR GCA 72 bp CACCAAGACAGACACTCGCCAGGGCCAGGAAACAGCTaGAAACGACGTCAAGAACCCAAACCCAAACGAAAC +
Preference number: 3 (lower is better)
Translates to: HQDRHSPGPGNS*KRRQEPKPKRN
Trigger: GTTTCGTTTGGGTTTGGGTTCTTGACGTCGTTTGCAGCTGTTTCCTGGCCCTGGCGAGTGTCTGTCTTGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000413823.1
3UTR-3UTR CAA 90 bp GTCTTCAGCACAGTTCTAAAACACGTAGTCAACTACTTACACGGAACCAACAGTTGGGGTGGGTGTCCGTaGGTAAGCGACCCCGCCAGG +
Preference number: 3 (lower is better)
Translates to: VFSTVLKHVVNYLHGTNSWGGCP*VSDPAR
Trigger: CCTGGCGGGGTCGCTTACCAACGGACACCCACCCCA...ACTGTTGGTTCCGTGTAAGTAGTTGACTACGTGTTTTAGAACTGTGCTGAAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000413823.1
3UTR-3UTR CAA 90 bp TTCAGCACAGTTCTAAAACACGTAGTCAACTACTTACACGGAACCAACAGTTTCGAGTCTGGTGGGAGGTaGAGGAAGAGACTCAGCCCC +
Preference number: 3 (lower is better)
Translates to: FSTVLKHVVNYLHGTNSFESGGR*RKRLSP
Trigger: GGGGCTGAGTCTCTTCCTCAACCTCCCACCAGACTC...GAAACTGTTGGTTCCGTGTAAGTAGTTGACTACGTGTTTTAGAACTGTGCTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
3UTR-3UTR CAA 90 bp TGCTGTGAGGATGACGAAACGGTTTGGCAGCCGCTTTTGTGCGCGTCTCCCTTAAGGTTTCGTAATCTTTaGTTCACACTGGAAAACCGA +
Preference number: 3 (lower is better)
Translates to: CCEDDETVWQPLLCASPLRFRNL*FTLENR
Trigger: TCGGTTTTCCAGTGTGAACAAAAGATTACGAAACCT...TAAGGGAGACGCGCACAAAAGCGGCTGCCAAACCGTTTCGTCATCCTCACAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000413823.1
CDS-3UTR TCA 90 bp GGTGGGTGTCCGTTGGTAAGCGACCCCGCCAGGGGCGGCCCACCTGGGCTGGGGGGTGCAGTGTGGGGCTaGGCGGGAAGGAGGGTGGCG +
Preference number: 4 (lower is better)
Translates to: GGCPLVSDPARGGPPGLGGAVWG*AGRRVA
Trigger: CGCCACCCTCCTTCCCGCTCAGCCCCACACTGCACC...CCCCAGCCCAGGTGGGCCGCCCCTGGCGGGGTCGCTTACCAACGGACACCCACC
74% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
CDS-3UTR TCA 90 bp GGTGGGTGTCCGTTGGTAAGCGACCCCGCCAGGGGCGGCCCACCTGGGCTGGGGGCAGACCGTTGGGGGTaGGGCCGTGGCACAGCGAGT +
Preference number: 4 (lower is better)
Translates to: GGCPLVSDPARGGPPGLGADRWG*GRGTAS
Trigger: ACTCGCTGTGCCACGGCCTCACCCCCAACGGTCTGC...CCCCAGCCCAGGTGGGCCGCCCCTGGCGGGGTCGCTTACCAACGGACACCCACC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
CDS-3UTR GCA 90 bp GGGTGGGTGTCCGTTGGTAAGCGACCCCGCCAGGGGCGGCCCACCTGGGCTGGGAGGGGGTCGCTGACTTaGTCCCCGGCGGTGATGGGG +
Preference number: 4 (lower is better)
Translates to: GWVSVGKRPRQGRPTWAGRGSLT*SPAVMG
Trigger: CCCCATCACCGCCGGGGAGCAAGTCAGCGACCCCCT...CCCAGCCCAGGTGGGCCGCCCCTGGCGGGGTCGCTTACCAACGGACACCCACCC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
CDS-3UTR CCA 90 bp GGTGGGTGTCCGTTGGTAAGCGACCCCGCCAGGGGCGGCCCACCTGGGCTGGGGAGTCCCCGCTGCTGGTaGGGTTGGATGGGCCAGGTG +
Preference number: 4 (lower is better)
Translates to: GGCPLVSDPARGGPPGLGSPRCW*GWMGQV
Trigger: CACCTGGCCCATCCAACCCCACCAGCAGCGGGGACT...CCCCAGCCCAGGTGGGCCGCCCCTGGCGGGGTCGCTTACCAACGGACACCCACC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000413823.1
CDS-3UTR CCA 90 bp GGGGCCGGGTGTCCAGACATAGGGTACCGTGCGCAGGGCGAGGACAGGGTCCACCGGGGGCCGGCCCTCTaGCCCATGCATCTGGGGTGG +
Preference number: 4 (lower is better)
Translates to: GAGCPDIGYRAQGEDRVHRGPAL*PMHLGW
Trigger: CCACCCCAGATGCATGGGCCAGAGGGCCGGCCCCCG...GTGGACCCTGTCCTCGCCCTGCGCACGGTACCCTATGTCTGGACACCCGGCCCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000413823.1
CDS-3UTR CCA 90 bp GGTGGGTGTCCGTTGGTAAGCGACCCCGCCAGGGGCGGCCCACCTGGGCTGGGGAGCAGTGCTCCGGGGTaGCTAGCAAGCGTCCGGTCC +
Preference number: 4 (lower is better)
Translates to: GGCPLVSDPARGGPPGLGSSAPG*LASVRS
Trigger: GGACCGGACGCTTGCTAGCCACCCCGGAGCACTGCT...CCCCAGCCCAGGTGGGCCGCCCCTGGCGGGGTCGCTTACCAACGGACACCCACC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000413823.1
CDS-3UTR TCA 90 bp CCGGCCCTCTGGCCCATGCATCTGGGGTGGGTGTCCGTTGGTAAGCGACCCCGCGCGGCGGGGACGCACTaGGGCCTGGCAGCAGAGACT +
Preference number: 4 (lower is better)
Translates to: PALWPMHLGWVSVGKRPRAAGTH*GLAAET
Trigger: AGTCTCTGCTGCCAGGCCTCAGTGCGTCCCCGCCGC...GCGGGGTCGCTTACCAACGGACACCCACCCCAGATGCATGGGCCAGAGGGCCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
CDS-3UTR CCA 90 bp GGTGGGTGTCCGTTGGTAAGCGACCCCGCCAGGGGCGGCCCACCTGGGCTGGGGGGACGCACTGAGGCCTaGCAGCAGAGACTTGGAGCC +
Preference number: 4 (lower is better)
Translates to: GGCPLVSDPARGGPPGLGGRTEA*QQRLGA
Trigger: GGCTCCAAGTCTCTGCTGCCAGGCCTCAGTGCGTCC...CCCCAGCCCAGGTGGGCCGCCCCTGGCGGGGTCGCTTACCAACGGACACCCACC
71% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
CDS-3UTR TCA 90 bp GGGTGGGTGTCCGTTGGTAAGCGACCCCGCCAGGGGCGGCCCACCTGGGCTGGGTGGGGTTCTGACCCTTaGTGGCGGCCTGAGTGTCTC +
Preference number: 4 (lower is better)
Translates to: GWVSVGKRPRQGRPTWAGWGSDP*WRPECL
Trigger: GAGACACTCAGGCCGCCATCAAGGGTCAGAACCCCA...CCCAGCCCAGGTGGGCCGCCCCTGGCGGGGTCGCTTACCAACGGACACCCACCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000413823.1
CDS-3UTR TCA 90 bp GGTGGGTGTCCGTTGGTAAGCGACCCCGCCAGGGGCGGCCCACCTGGGCTGGGGTGGGGTTCTGACCCTTaGTGGCGGCCTGAGTGTCTC +
Preference number: 4 (lower is better)
Translates to: GGCPLVSDPARGGPPGLGWGSDP*WRPECL
Trigger: GAGACACTCAGGCCGCCATCAAGGGTCAGAACCCCA...CCCCAGCCCAGGTGGGCCGCCCCTGGCGGGGTCGCTTACCAACGGACACCCACC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000413823.1
CDS-3UTR CCA 90 bp GGGTGGGTGTCCGTTGGTAAGCGACCCCGCCAGGGGCGGCCCACCTGGGCTGGGAGGCCAGGCCTGGCATaGCATACATGGGCTGCTTGG +
Preference number: 4 (lower is better)
Translates to: GWVSVGKRPRQGRPTWAGRPGLA*HTWAAW
Trigger: CCAAGCAGCCCATGTATGCCATGCCAGGCCTGGCCT...CCCAGCCCAGGTGGGCCGCCCCTGGCGGGGTCGCTTACCAACGGACACCCACCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
CDS-3UTR CCA 90 bp CGGGGGCCGGCCCTCTGGCCCATGCATCTGGGGTGGGTGTCCGTTGGTAAGCGACCCAGTCCCCGCTGCTaGTGGGGTTGGATGGGCCAG +
Preference number: 4 (lower is better)
Translates to: RGPALWPMHLGWVSVGKRPSPRC*WGWMGQ
Trigger: CTGGCCCATCCAACCCCACCAGCAGCGGGGACTGGG...TCGCTTACCAACGGACACCCACCCCAGATGCATGGGCCAGAGGGCCGGCCCCCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000413823.1
CDS-3UTR TCA 90 bp GGGGCCGGGTGTCCAGACATAGGGTACCGTGCGCAGGGCGAGGACAGGGTCCACGCAGGCTGCAGGTGCTaGTGCCACACTCCCCACTGG +
Preference number: 4 (lower is better)
Translates to: GAGCPDIGYRAQGEDRVHAGCRC*CHTPHW
Trigger: CCAGTGGGGAGTGTGGCATCAGCACCTGCAGCCTGC...GTGGACCCTGTCCTCGCCCTGCGCACGGTACCCTATGTCTGGACACCCGGCCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000413823.1
CDS-3UTR GCA 90 bp CCCGGGCAATGGGTGTGTCACTGCTCTCTCCGATGGGCCACCCTGCCTCTGGCCAGGGGGTCGCTGACTTaGTCCCCGGCGGTGATGGGG +
Preference number: 4 (lower is better)
Translates to: PGQWVCHCSLRWATLPLARGSLT*SPAVMG
Trigger: CCCCATCACCGCCGGGGAGCAAGTCAGCGACCCCCT...GGCCAGAGGCAGGGTGGCCCATCGGAGAGAGCAGTGACACACCCATTGCCCGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000423191.6
CDS-3UTR GCA 90 bp CGGGGGCCGGCCCTCTGGCCCATGCATCTGGGGTGGGTGTCCGTTGGTAAGCGAGGGGGCAGTGACAGCTaGTGGTGCAGTGTGGGGCTG +
Preference number: 4 (lower is better)
Translates to: RGPALWPMHLGWVSVGKRGGSDS*WCSVGL
Trigger: CAGCCCCACACTGCACCAGCAGCTGTCACTGCCCCC...TCGCTTACCAACGGACACCCACCCCAGATGCATGGGCCAGAGGGCCGGCCCCCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
CDS-3UTR GCA 90 bp GGCCGGCCCTCTGGCCCATGCATCTGGGGTGGGTGTCCGTTGGTAAGCGACCCCTCCGATGGGCCACCCTaGCTCTGGCCAGGGCCTCTT +
Preference number: 4 (lower is better)
Translates to: GRPSGPCIWGGCPLVSDPSDGPP*LWPGPL
Trigger: AAGAGGCCCTGGCCAGAGGCAGGGTGGCCCATCGGA...GGGGTCGCTTACCAACGGACACCCACCCCAGATGCATGGGCCAGAGGGCCGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000413823.1
CDS-3UTR GCA 90 bp GGCCGGCCCTCTGGCCCATGCATCTGGGGTGGGTGTCCGTTGGTAAGCGACCCCCGATGTGCACATCTATaGCGGGGGCCGGCCCTCTGG +
Preference number: 4 (lower is better)
Translates to: GRPSGPCIWGGCPLVSDPRCAHL*RGPALW
Trigger: CCAGAGGGCCGGCCCCCGGCATAGATGTGCACATCG...GGGGTCGCTTACCAACGGACACCCACCCCAGATGCATGGGCCAGAGGGCCGGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000413823.1
CDS-3UTR CCA 90 bp GGGTGGGTGTCCGTTGGTAAGCGACCCCGCCAGGGGCGGCCCACCTGGGCTGGGTGGCTGGGAGGTCCATaGCCTGATAGGAGTAGGCAG +
Preference number: 4 (lower is better)
Translates to: GWVSVGKRPRQGRPTWAGWLGGP*PDRSRQ
Trigger: CTGCCTACTCCTATCAGGCCATGGACCTCCCAGCCA...CCCAGCCCAGGTGGGCCGCCCCTGGCGGGGTCGCTTACCAACGGACACCCACCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
CDS-3UTR CCA 90 bp GGGTGGGTGTCCGTTGGTAAGCGACCCCGCCAGGGGCGGCCCACCTGGGCTGGGTTCCTGCAGGTTCTTTaGGCTGGTGGTGGGCAGTGG +
Preference number: 4 (lower is better)
Translates to: GWVSVGKRPRQGRPTWAGFLQVL*AGGGQW
Trigger: CCACTGCCCACCACCAGCCCAAAGAACCTGCAGGAA...CCCAGCCCAGGTGGGCCGCCCCTGGCGGGGTCGCTTACCAACGGACACCCACCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000413823.1
CDS-3UTR TCA 90 bp CCTTCAGGCTCTGAGCAGTGCCTTCCAGCGAGCCTCAGGGATGGTAGGGAGGCGGGTGCAGTGTGGGGCTaGGCGGGAAGGAGGGTGGCG +
Preference number: 4 (lower is better)
Translates to: PSGSEQCLPASLRDGREAGAVWG*AGRRVA
Trigger: CGCCACCCTCCTTCCCGCTCAGCCCCACACTGCACC...CGCCTCCCTACCATCCCTGAGGCTCGCTGGAAGGCACTGCTCAGAGCCTGAAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000423191.6
CDS-3UTR TCA 90 bp CCGGCCCTCTGGCCCATGCATCTGGGGTGGGTGTCCGTTGGTAAGCGACCCCGCCAGCCCTTCAGGCTCTaGGCAGTGCCTTCCAGCGAG +
Preference number: 4 (lower is better)
Translates to: PALWPMHLGWVSVGKRPRQPFRL*AVPSSE
Trigger: CTCGCTGGAAGGCACTGCTCAGAGCCTGAAGGGCTG...GCGGGGTCGCTTACCAACGGACACCCACCCCAGATGCATGGGCCAGAGGGCCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000413823.1
CDS-3UTR TCA 90 bp GGCCGGCCCTCTGGCCCATGCATCTGGGGTGGGTGTCCGTTGGTAAGCGACCCCCAGCCCTTCAGGCTCTaGGCAGTGCCTTCCAGCGAG +
Preference number: 4 (lower is better)
Translates to: GRPSGPCIWGGCPLVSDPQPFRL*AVPSSE
Trigger: CTCGCTGGAAGGCACTGCTCAGAGCCTGAAGGGCTG...GGGGTCGCTTACCAACGGACACCCACCCCAGATGCATGGGCCAGAGGGCCGGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000413823.1
CDS-3UTR GCA 90 bp CCTTCAGGCTCTGAGCAGTGCCTTCCAGCGAGCCTCAGGGATGGTAGGGAGGCGGTGGCTGGCCAGCATTaGCGGGCGACCCAGCAGGGG +
Preference number: 4 (lower is better)
Translates to: PSGSEQCLPASLRDGREAVAGQH*RATQQG
Trigger: CCCCTGCTGGGTCGCCCGGCAATGCTGGCCAGCCAC...CGCCTCCCTACCATCCCTGAGGCTCGCTGGAAGGCACTGCTCAGAGCCTGAAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000423191.6
CDS-3UTR GCA 90 bp CCCGGGCAATGGGTGTGTCACTGCTCTCTCCGATGGGCCACCCTGCCTCTGGCCTCCGATGGGCCACCCTaGCTCTGGCCAGGGCCTCTT +
Preference number: 4 (lower is better)
Translates to: PGQWVCHCSLRWATLPLASDGPP*LWPGPL
Trigger: AAGAGGCCCTGGCCAGAGGCAGGGTGGCCCATCGGA...GGCCAGAGGCAGGGTGGCCCATCGGAGAGAGCAGTGACACACCCATTGCCCGGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000423191.6
CDS-3UTR GCA 90 bp GGGTGGGTGTCCGTTGGTAAGCGACCCCGCCAGGGGCGGCCCACCTGGGCTGGGCAAGCGTCCGGTCCTTaGTGTGAGGATGACGAAACG +
Preference number: 4 (lower is better)
Translates to: GWVSVGKRPRQGRPTWAGQASGP*CEDDET
Trigger: CGTTTCGTCATCCTCACAGCAAGGACCGGACGCTTG...CCCAGCCCAGGTGGGCCGCCCCTGGCGGGGTCGCTTACCAACGGACACCCACCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000413823.1
CDS-3UTR CCA 90 bp CCCGGGCAATGGGTGTGTCACTGCTCTCTCCGATGGGCCACCCTGCCTCTGGCCTGGATCGTGGGCAGCTaGCCCGACAGCAGGTGGCTG +
Preference number: 4 (lower is better)
Translates to: PGQWVCHCSLRWATLPLAWIVGS*PDSRWL
Trigger: CAGCCACCTGCTGTCGGGCCAGCTGCCCACGATCCA...GGCCAGAGGCAGGGTGGCCCATCGGAGAGAGCAGTGACACACCCATTGCCCGGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000423191.6
CDS-3UTR CCA 90 bp GGCCGGCCCTCTGGCCCATGCATCTGGGGTGGGTGTCCGTTGGTAAGCGACCCCCTGAGGGCACTCATGTaGCTGGCCAGCATTGCCGGG +
Preference number: 4 (lower is better)
Translates to: GRPSGPCIWGGCPLVSDPLRALM*LASIAG
Trigger: CCCGGCAATGCTGGCCAGCCACATGAGTGCCCTCAG...GGGGTCGCTTACCAACGGACACCCACCCCAGATGCATGGGCCAGAGGGCCGGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
CDS-3UTR CCA 90 bp CCGGCCCTCTGGCCCATGCATCTGGGGTGGGTGTCCGTTGGTAAGCGACCCCGCGGACGCACTGAGGCCTaGCAGCAGAGACTTGGAGCC +
Preference number: 4 (lower is better)
Translates to: PALWPMHLGWVSVGKRPRGRTEA*QQRLGA
Trigger: GGCTCCAAGTCTCTGCTGCCAGGCCTCAGTGCGTCC...GCGGGGTCGCTTACCAACGGACACCCACCCCAGATGCATGGGCCAGAGGGCCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
CDS-3UTR CCA 90 bp GGCCGGCCCTCTGGCCCATGCATCTGGGGTGGGTGTCCGTTGGTAAGCGACCCCGGCAGTGACAGCTGCTaGTGCAGTGTGGGGCTGAGC +
Preference number: 4 (lower is better)
Translates to: GRPSGPCIWGGCPLVSDPGSDSC*CSVGLS
Trigger: GCTCAGCCCCACACTGCACCAGCAGCTGTCACTGCC...GGGGTCGCTTACCAACGGACACCCACCCCAGATGCATGGGCCAGAGGGCCGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
CDS-3UTR CCA 90 bp GGGGCCGGGTGTCCAGACATAGGGTACCGTGCGCAGGGCGAGGACAGGGTCCACGGCAGTGACAGCTGCTaGTGCAGTGTGGGGCTGAGC +
Preference number: 4 (lower is better)
Translates to: GAGCPDIGYRAQGEDRVHGSDSC*CSVGLS
Trigger: GCTCAGCCCCACACTGCACCAGCAGCTGTCACTGCC...GTGGACCCTGTCCTCGCCCTGCGCACGGTACCCTATGTCTGGACACCCGGCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
CDS-3UTR CCA 90 bp CCTTCAGGCTCTGAGCAGTGCCTTCCAGCGAGCCTCAGGGATGGTAGGGAGGCGGGAGTGCCATGGGGGTaGGCAGGACAGGGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: PSGSEQCLPASLRDGREAGVPWG*AGQGAG
Trigger: CCCAGCCCCCTGTCCTGCCCACCCCCATGGCACTCC...CGCCTCCCTACCATCCCTGAGGCTCGCTGGAAGGCACTGCTCAGAGCCTGAAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000423191.6
CDS-3UTR TCA 90 bp TCAGCCCTTCAGGCTCTGAGCAGTGCCTTCCAGCGAGCCTCAGGGATGGTAGGGGCGGCGGGGACGCACTaGGGCCTGGCAGCAGAGACT +
Preference number: 4 (lower is better)
Translates to: SALQALSSAFQRASGMVGAAGTH*GLAAET
Trigger: AGTCTCTGCTGCCAGGCCTCAGTGCGTCCCCGCCGC...CCCTACCATCCCTGAGGCTCGCTGGAAGGCACTGCTCAGAGCCTGAAGGGCTGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000423191.6
CDS-3UTR TCA 90 bp CCCGGGCAATGGGTGTGTCACTGCTCTCTCCGATGGGCCACCCTGCCTCTGGCCGTTGGATGGGCCAGGTaGGCAGGATCCCGAGCTGCT +
Preference number: 4 (lower is better)
Translates to: PGQWVCHCSLRWATLPLAVGWAR*AGSRAA
Trigger: AGCAGCTCGGGATCCTGCTCACCTGGCCCATCCAAC...GGCCAGAGGCAGGGTGGCCCATCGGAGAGAGCAGTGACACACCCATTGCCCGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000423191.6
CDS-3UTR TCA 90 bp CCCGGGCAATGGGTGTGTCACTGCTCTCTCCGATGGGCCACCCTGCCTCTGGCCCAGCCCTTCAGGCTCTaGGCAGTGCCTTCCAGCGAG +
Preference number: 4 (lower is better)
Translates to: PGQWVCHCSLRWATLPLAQPFRL*AVPSSE
Trigger: CTCGCTGGAAGGCACTGCTCAGAGCCTGAAGGGCTG...GGCCAGAGGCAGGGTGGCCCATCGGAGAGAGCAGTGACACACCCATTGCCCGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000423191.6
CDS-3UTR GCA 90 bp CTGGAGCAAGCAGGTCAGCGGGCGGAAGGTTCCTGCAGGTTCTTTGGGCTGGTGGTGGCTGGCCAGCATTaGCGGGCGACCCAGCAGGGG +
Preference number: 4 (lower is better)
Translates to: LEQAGQRAEGSCRFFGLVVAGQH*RATQQG
Trigger: CCCCTGCTGGGTCGCCCGGCAATGCTGGCCAGCCAC...CACCAGCCCAAAGAACCTGCAGGAACCTTCCGCCCGCTGACCTGCTTGCTCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
CDS-3UTR GCA 90 bp CCCGGGCAATGGGTGTGTCACTGCTCTCTCCGATGGGCCACCCTGCCTCTGGCCGGGAGCTGTGGGCGATaGTGCTCCGGATGCCCATCT +
Preference number: 4 (lower is better)
Translates to: PGQWVCHCSLRWATLPLAGSCGR*CSGCPS
Trigger: AGATGGGCATCCGGAGCAGCATCGCCCACAGCTCCC...GGCCAGAGGCAGGGTGGCCCATCGGAGAGAGCAGTGACACACCCATTGCCCGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000423191.6
CDS-3UTR GCA 90 bp GGCCGGCCCTCTGGCCCATGCATCTGGGGTGGGTGTCCGTTGGTAAGCGACCCCTCAGGCTCTGAGCAGTaGCTTCCAGCGAGCCTCAGG +
Preference number: 4 (lower is better)
Translates to: GRPSGPCIWGGCPLVSDPSGSEQ*LPASLR
Trigger: CCTGAGGCTCGCTGGAAGGCACTGCTCAGAGCCTGA...GGGGTCGCTTACCAACGGACACCCACCCCAGATGCATGGGCCAGAGGGCCGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000413823.1
CDS-3UTR GCA 90 bp CCCGGGCAATGGGTGTGTCACTGCTCTCTCCGATGGGCCACCCTGCCTCTGGCCTGGTGGGCAGTGGGCTaGCTCTGCAGAGTCTGGTGG +
Preference number: 4 (lower is better)
Translates to: PGQWVCHCSLRWATLPLAWWAVG*LCRVWW
Trigger: CCACCAGACTCTGCAGAGGCAGCCCACTGCCCACCA...GGCCAGAGGCAGGGTGGCCCATCGGAGAGAGCAGTGACACACCCATTGCCCGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000423191.6
CDS-3UTR GCA 90 bp CCGGCCCTCTGGCCCATGCATCTGGGGTGGGTGTCCGTTGGTAAGCGACCCCGCAGACATAGGGTACCGTaGGCAGGGCGAGGACAGGGT +
Preference number: 4 (lower is better)
Translates to: PALWPMHLGWVSVGKRPRRHRVP*AGRGQG
Trigger: ACCCTGTCCTCGCCCTGCGCACGGTACCCTATGTCT...GCGGGGTCGCTTACCAACGGACACCCACCCCAGATGCATGGGCCAGAGGGCCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000413823.1
CDS-3UTR GCA 90 bp GGGGCCGGGTGTCCAGACATAGGGTACCGTGCGCAGGGCGAGGACAGGGTCCACAGACATAGGGTACCGTaGGCAGGGCGAGGACAGGGT +
Preference number: 4 (lower is better)
Translates to: GAGCPDIGYRAQGEDRVHRHRVP*AGRGQG
Trigger: ACCCTGTCCTCGCCCTGCGCACGGTACCCTATGTCT...GTGGACCCTGTCCTCGCCCTGCGCACGGTACCCTATGTCTGGACACCCGGCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000413823.1
CDS-3UTR GCA 90 bp GGTGGGTGTCCGTTGGTAAGCGACCCCGCCAGGGGCGGCCCACCTGGGCTGGGGGGGAACTCAGAGATGTaGGGGAAGTCCTGCTTCTGT +
Preference number: 4 (lower is better)
Translates to: GGCPLVSDPARGGPPGLGGNSEM*GKSCFC
Trigger: ACAGAAGCAGGACTTCCCGCACATCTCTGAGTTCCC...CCCCAGCCCAGGTGGGCCGCCCCTGGCGGGGTCGCTTACCAACGGACACCCACC
67% GC, longest homopolymer 7 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000413823.1
CDS-3UTR CCA 90 bp CGGGGGCCGGCCCTCTGGCCCATGCATCTGGGGTGGGTGTCCGTTGGTAAGCGAACAGCGAGTGGTAGCTaGCTTCGTGGTCCCCCAGGT +
Preference number: 4 (lower is better)
Translates to: RGPALWPMHLGWVSVGKRTASGS*LRGPPG
Trigger: ACCTGGGGGACCACGAAGCCAGCTACCACTCGCTGT...TCGCTTACCAACGGACACCCACCCCAGATGCATGGGCCAGAGGGCCGGCCCCCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
CDS-3UTR CCA 90 bp GGTGGGTGTCCGTTGGTAAGCGACCCCGCCAGGGGCGGCCCACCTGGGCTGGGGTGGGAGCATTTTGGCTaGTGGGTTTGCCTGAGTGCT +
Preference number: 4 (lower is better)
Translates to: GGCPLVSDPARGGPPGLGWEHFG*WVCLSA
Trigger: AGCACTCAGGCAAACCCACCAGCCAAAATGCTCCCA...CCCCAGCCCAGGTGGGCCGCCCCTGGCGGGGTCGCTTACCAACGGACACCCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
CDS-3UTR CCA 90 bp CGGGGGCCGGCCCTCTGGCCCATGCATCTGGGGTGGGTGTCCGTTGGTAAGCGAGGACATGCTAACAGGTaGACTGAGGAGGGCGCCCTG +
Preference number: 4 (lower is better)
Translates to: RGPALWPMHLGWVSVGKRGHANR*TEEGAL
Trigger: CAGGGCGCCCTCCTCAGTCCACCTGTTAGCATGTCC...TCGCTTACCAACGGACACCCACCCCAGATGCATGGGCCAGAGGGCCGGCCCCCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
CDS-3UTR CCA 90 bp GGAGCAAGCAGGTCAGCGGGCGGAAGGTTCCTGCAGGTTCTTTGGGCTGGTGGTGGAGTGCCATGGGGGTaGGCAGGACAGGGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: GASRSAGGRFLQVLWAGGGVPWG*AGQGAG
Trigger: CCCAGCCCCCTGTCCTGCCCACCCCCATGGCACTCC...ACCACCAGCCCAAAGAACCTGCAGGAACCTTCCGCCCGCTGACCTGCTTGCTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
CDS-3UTR CCA 90 bp CCTTCAGGCTCTGAGCAGTGCCTTCCAGCGAGCCTCAGGGATGGTAGGGAGGCGCCCAGTCCCCGCTGCTaGTGGGGTTGGATGGGCCAG +
Preference number: 4 (lower is better)
Translates to: PSGSEQCLPASLRDGREAPSPRC*WGWMGQ
Trigger: CTGGCCCATCCAACCCCACCAGCAGCGGGGACTGGG...CGCCTCCCTACCATCCCTGAGGCTCGCTGGAAGGCACTGCTCAGAGCCTGAAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000423191.6
CDS-3UTR TCA 90 bp AGGTTGAGGAAGAGACTCAGCCCCCGGGCAATGGGTGTGTCACTGCTCTCTCCGGGTGCAGTGTGGGGCTaGGCGGGAAGGAGGGTGGCG +
Preference number: 4 (lower is better)
Translates to: RLRKRLSPRAMGVSLLSPGAVWG*AGRRVA
Trigger: CGCCACCCTCCTTCCCGCTCAGCCCCACACTGCACC...CGGAGAGAGCAGTGACACACCCATTGCCCGGGGGCTGAGTCTCTTCCTCAACCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000423191.6
CDS-3UTR GCA 90 bp GGGTGGGTGTCCGTTGGTAAGCGACCCCGCCAGGGGCGGCCCACCTGGGCTGGGCCCGAGATCTTGAAATaGACTTCCGACTCCTCTTCC +
Preference number: 4 (lower is better)
Translates to: GWVSVGKRPRQGRPTWAGPEILK*TSDSSS
Trigger: GGAAGAGGAGTCGGAAGTGCATTTCAAGATCTCGGG...CCCAGCCCAGGTGGGCCGCCCCTGGCGGGGTCGCTTACCAACGGACACCCACCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
CDS-3UTR GCA 90 bp GGCCGGCCCTCTGGCCCATGCATCTGGGGTGGGTGTCCGTTGGTAAGCGACCCCGCTAGCCCGGTAGGCTaGCAGGGCCTTCAGATATTC +
Preference number: 4 (lower is better)
Translates to: GRPSGPCIWGGCPLVSDPASPVG*QGLQIF
Trigger: GAATATCTGAAGGCCCTGGCAGCCTACCGGGCTAGC...GGGGTCGCTTACCAACGGACACCCACCCCAGATGCATGGGCCAGAGGGCCGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341197.9
ENST00000372999.5
CDS-3UTR GCA 90 bp GGTCCACAGTTACCCTGGAGCAAGCAGGTCAGCGGGCGGAAGGTTCCTGCAGGTCCACTGCGGAAGGCCTaGAGGTCCGACGGCGTCAGG +
Preference number: 4 (lower is better)
Translates to: GPQLPWSKQVSGRKVPAGPLRKA*RSDGVR
Trigger: CCTGACGCCGTCGGACCTGCAGGCCTTCCGCAGTGG...ACCTGCAGGAACCTTCCGCCCGCTGACCTGCTTGCTCCAGGGTAACTGTGGACC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
CDS-3UTR GCA 90 bp CCTTCAGGCTCTGAGCAGTGCCTTCCAGCGAGCCTCAGGGATGGTAGGGAGGCGTGTCCCAGTCCCCGCTaGTGGTGGGGTTGGATGGGC +
Preference number: 4 (lower is better)
Translates to: PSGSEQCLPASLRDGREACPSPR*WWGWMG
Trigger: GCCCATCCAACCCCACCAGCAGCGGGGACTGGGACA...CGCCTCCCTACCATCCCTGAGGCTCGCTGGAAGGCACTGCTCAGAGCCTGAAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000423191.6
CDS-3UTR GCA 90 bp CCGGCCCTCTGGCCCATGCATCTGGGGTGGGTGTCCGTTGGTAAGCGACCCCGCCAATGGGTGTGTCACTaGTCTCTCCGATGGGCCACC +
Preference number: 4 (lower is better)
Translates to: PALWPMHLGWVSVGKRPRQWVCH*SLRWAT
Trigger: GGTGGCCCATCGGAGAGAGCAGTGACACACCCATTG...GCGGGGTCGCTTACCAACGGACACCCACCCCAGATGCATGGGCCAGAGGGCCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000413823.1
CDS-3UTR CCA 90 bp GGAGAGCAGTGCTCCGGGGTGGCTAGCAAGCGTCCGGTCCTTGCTGTGAGGATGTGGATCGTGGGCAGCTaGCCCGACAGCAGGTGGCTG +
Preference number: 4 (lower is better)
Translates to: GEQCSGVASKRPVLAVRMWIVGS*PDSRWL
Trigger: CAGCCACCTGCTGTCGGGCCAGCTGCCCACGATCCA...CATCCTCACAGCAAGGACCGGACGCTTGCTAGCCACCCCGGAGCACTGCTCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
CDS-3UTR CCA 90 bp GGGTGGGTGTCCGTTGGTAAGCGACCCCGCCAGGGGCGGCCCACCTGGGCTGGGGAGCATTTTGGCTGGTaGGTTTGCCTGAGTGCTCTT +
Preference number: 4 (lower is better)
Translates to: GWVSVGKRPRQGRPTWAGEHFGW*VCLSAL
Trigger: AAGAGCACTCAGGCAAACCCACCAGCCAAAATGCTC...CCCAGCCCAGGTGGGCCGCCCCTGGCGGGGTCGCTTACCAACGGACACCCACCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
CDS-3UTR CCA 90 bp GGGGCCGGGTGTCCAGACATAGGGTACCGTGCGCAGGGCGAGGACAGGGTCCACCATGGGCTGCTTGGGTaGGAGCATTTTGGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: GAGCPDIGYRAQGEDRVHHGLLG*EHFGWW
Trigger: CCACCAGCCAAAATGCTCCCACCCAAGCAGCCCATG...GTGGACCCTGTCCTCGCCCTGCGCACGGTACCCTATGTCTGGACACCCGGCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
CDS-3UTR CCA 90 bp CGGGGGCCGGCCCTCTGGCCCATGCATCTGGGGTGGGTGTCCGTTGGTAAGCGACTGGCATGGCATACATaGGCTGCTTGGGTGGGAGCA +
Preference number: 4 (lower is better)
Translates to: RGPALWPMHLGWVSVGKRLAWHT*AAWVGA
Trigger: TGCTCCCACCCAAGCAGCCCATGTATGCCATGCCAG...TCGCTTACCAACGGACACCCACCCCAGATGCATGGGCCAGAGGGCCGGCCCCCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
CDS-3UTR CCA 90 bp CCCGGGCAATGGGTGTGTCACTGCTCTCTCCGATGGGCCACCCTGCCTCTGGCCAGGCCAGGCCTGGCATaGCATACATGGGCTGCTTGG +
Preference number: 4 (lower is better)
Translates to: PGQWVCHCSLRWATLPLARPGLA*HTWAAW
Trigger: CCAAGCAGCCCATGTATGCCATGCCAGGCCTGGCCT...GGCCAGAGGCAGGGTGGCCCATCGGAGAGAGCAGTGACACACCCATTGCCCGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000423191.6
CDS-3UTR CCA 90 bp CCCGGGCAATGGGTGTGTCACTGCTCTCTCCGATGGGCCACCCTGCCTCTGGCCGGACATGCTAACAGGTaGACTGAGGAGGGCGCCCTG +
Preference number: 4 (lower is better)
Translates to: PGQWVCHCSLRWATLPLAGHANR*TEEGAL
Trigger: CAGGGCGCCCTCCTCAGTCCACCTGTTAGCATGTCC...GGCCAGAGGCAGGGTGGCCCATCGGAGAGAGCAGTGACACACCCATTGCCCGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000423191.6
CDS-3UTR CCA 90 bp GAGGTTGAGGAAGAGACTCAGCCCCCGGGCAATGGGTGTGTCACTGCTCTCTCCGGAGTGCCATGGGGGTaGGCAGGACAGGGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: EVEEETQPPGNGCVTALSGVPWG*AGQGAG
Trigger: CCCAGCCCCCTGTCCTGCCCACCCCCATGGCACTCC...GGAGAGAGCAGTGACACACCCATTGCCCGGGGGCTGAGTCTCTTCCTCAACCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000423191.6
CDS-3UTR CCA 90 bp CCTTCAGGCTCTGAGCAGTGCCTTCCAGCGAGCCTCAGGGATGGTAGGGAGGCGATCGCCAGCTGCACCTaGAGTGCCATGGGGGTGGGC +
Preference number: 4 (lower is better)
Translates to: PSGSEQCLPASLRDGREAIASCT*SAMGVG
Trigger: GCCCACCCCCATGGCACTCCAGGTGCAGCTGGCGAT...CGCCTCCCTACCATCCCTGAGGCTCGCTGGAAGGCACTGCTCAGAGCCTGAAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000423191.6
CDS-3UTR CCA 90 bp CTGGAGCAAGCAGGTCAGCGGGCGGAAGGTTCCTGCAGGTTCTTTGGGCTGGTGCCCAGTCCCCGCTGCTaGTGGGGTTGGATGGGCCAG +
Preference number: 4 (lower is better)
Translates to: LEQAGQRAEGSCRFFGLVPSPRC*WGWMGQ
Trigger: CTGGCCCATCCAACCCCACCAGCAGCGGGGACTGGG...CACCAGCCCAAAGAACCTGCAGGAACCTTCCGCCCGCTGACCTGCTTGCTCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
CDS-3UTR CCA 90 bp CGGGGGCCGGCCCTCTGGCCCATGCATCTGGGGTGGGTGTCCGTTGGTAAGCGATCTGGCCCATGCATCTaGGGTGGGTGTCCGTTGGTA +
Preference number: 4 (lower is better)
Translates to: RGPALWPMHLGWVSVGKRSGPCI*GGCPLV
Trigger: TACCAACGGACACCCACCCCAGATGCATGGGCCAGA...TCGCTTACCAACGGACACCCACCCCAGATGCATGGGCCAGAGGGCCGGCCCCCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000413823.1
CDS-3UTR TCA 90 bp CCGGCCCTCTGGCCCATGCATCTGGGGTGGGTGTCCGTTGGTAAGCGACCCCGCCCCTTGATGGCGGCCTaGGTGTCTCTGAAGAAGAGT +
Preference number: 4 (lower is better)
Translates to: PALWPMHLGWVSVGKRPRPLMAA*VSLKKS
Trigger: ACTCTTCTTCAGAGACACTCAGGCCGCCATCAAGGG...GCGGGGTCGCTTACCAACGGACACCCACCCCAGATGCATGGGCCAGAGGGCCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000413823.1
CDS-3UTR TCA 90 bp GGGGCCGGGTGTCCAGACATAGGGTACCGTGCGCAGGGCGAGGACAGGGTCCACCCCTTGATGGCGGCCTaGGTGTCTCTGAAGAAGAGT +
Preference number: 4 (lower is better)
Translates to: GAGCPDIGYRAQGEDRVHPLMAA*VSLKKS
Trigger: ACTCTTCTTCAGAGACACTCAGGCCGCCATCAAGGG...GTGGACCCTGTCCTCGCCCTGCGCACGGTACCCTATGTCTGGACACCCGGCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000413823.1
CDS-3UTR TCA 90 bp CCCGGGCAATGGGTGTGTCACTGCTCTCTCCGATGGGCCACCCTGCCTCTGGCCGCTGGTGGGTTTGCCTaGGTGCTCTTGGTCTCACCT +
Preference number: 4 (lower is better)
Translates to: PGQWVCHCSLRWATLPLAAGGFA*VLLVSP
Trigger: AGGTGAGACCAAGAGCACTCAGGCAAACCCACCAGC...GGCCAGAGGCAGGGTGGCCCATCGGAGAGAGCAGTGACACACCCATTGCCCGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000423191.6
CDS-3UTR TCA 90 bp CCTTCAGGCTCTGAGCAGTGCCTTCCAGCGAGCCTCAGGGATGGTAGGGAGGCGGTTGGATGGGCCAGGTaGGCAGGATCCCGAGCTGCT +
Preference number: 4 (lower is better)
Translates to: PSGSEQCLPASLRDGREAVGWAR*AGSRAA
Trigger: AGCAGCTCGGGATCCTGCTCACCTGGCCCATCCAAC...CGCCTCCCTACCATCCCTGAGGCTCGCTGGAAGGCACTGCTCAGAGCCTGAAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000423191.6
CDS-3UTR TCA 90 bp GGCCGGCCCTCTGGCCCATGCATCTGGGGTGGGTGTCCGTTGGTAAGCGACCCCCTCTTGGTCTCACCTTaGTCTGGGGAGCTCTGCTTC +
Preference number: 4 (lower is better)
Translates to: GRPSGPCIWGGCPLVSDPLLVSP*SGELCF
Trigger: GAAGCAGAGCTCCCCAGATCAAGGTGAGACCAAGAG...GGGGTCGCTTACCAACGGACACCCACCCCAGATGCATGGGCCAGAGGGCCGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000358131.5
CDS-3UTR GCA 90 bp CCTTCAGGCTCTGAGCAGTGCCTTCCAGCGAGCCTCAGGGATGGTAGGGAGGCGAGCTGTGGGCGATGCTaGTCCGGATGCCCATCTGCG +
Preference number: 4 (lower is better)
Translates to: PSGSEQCLPASLRDGREASCGRC*SGCPSA
Trigger: CGCAGATGGGCATCCGGAGCAGCATCGCCCACAGCT...CGCCTCCCTACCATCCCTGAGGCTCGCTGGAAGGCACTGCTCAGAGCCTGAAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000423191.6
CDS-3UTR GCA 90 bp CCCGGGCAATGGGTGTGTCACTGCTCTCTCCGATGGGCCACCCTGCCTCTGGCCGCTAGCCCGGTAGGCTaGCAGGGCCTTCAGATATTC +
Preference number: 4 (lower is better)
Translates to: PGQWVCHCSLRWATLPLAASPVG*QGLQIF
Trigger: GAATATCTGAAGGCCCTGGCAGCCTACCGGGCTAGC...GGCCAGAGGCAGGGTGGCCCATCGGAGAGAGCAGTGACACACCCATTGCCCGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341197.9
ENST00000372999.5
ENST00000423191.6
CDS-3UTR GCA 90 bp GAGGTTGAGGAAGAGACTCAGCCCCCGGGCAATGGGTGTGTCACTGCTCTCTCCCCACTGCGGAAGGCCTaGAGGTCCGACGGCGTCAGG +
Preference number: 4 (lower is better)
Translates to: EVEEETQPPGNGCVTALSPLRKA*RSDGVR
Trigger: CCTGACGCCGTCGGACCTGCAGGCCTTCCGCAGTGG...GGAGAGAGCAGTGACACACCCATTGCCCGGGGGCTGAGTCTCTTCCTCAACCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000423191.6
CDS-3UTR GCA 90 bp AGGTTGAGGAAGAGACTCAGCCCCCGGGCAATGGGTGTGTCACTGCTCTCTCCGCCACTGCGGAAGGCCTaGAGGTCCGACGGCGTCAGG +
Preference number: 4 (lower is better)
Translates to: RLRKRLSPRAMGVSLLSPPLRKA*RSDGVR
Trigger: CCTGACGCCGTCGGACCTGCAGGCCTTCCGCAGTGG...CGGAGAGAGCAGTGACACACCCATTGCCCGGGGGCTGAGTCTCTTCCTCAACCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000423191.6
CDS-3UTR GCA 90 bp TCAGCCCTTCAGGCTCTGAGCAGTGCCTTCCAGCGAGCCTCAGGGATGGTAGGGCGATGTGCACATCTATaGCGGGGGCCGGCCCTCTGG +
Preference number: 4 (lower is better)
Translates to: SALQALSSAFQRASGMVGRCAHL*RGPALW
Trigger: CCAGAGGGCCGGCCCCCGGCATAGATGTGCACATCG...CCCTACCATCCCTGAGGCTCGCTGGAAGGCACTGCTCAGAGCCTGAAGGGCTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
CDS-3UTR GCA 90 bp TTGAGGAAGAGACTCAGCCCCCGGGCAATGGGTGTGTCACTGCTCTCTCCGATGCGTCTGCGCCAGGGCTaGGGGAAACCCACGCGCGCT +
Preference number: 4 (lower is better)
Translates to: LRKRLSPRAMGVSLLSPMRLRQG*GKPTRA
Trigger: AGCGCGCGTGGGTTTCCCGCAGCCCTGGCGCAGACG...CATCGGAGAGAGCAGTGACACACCCATTGCCCGGGGGCTGAGTCTCTTCCTCAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000423191.6
CDS-3UTR GCA 90 bp TTGAGGAAGAGACTCAGCCCCCGGGCAATGGGTGTGTCACTGCTCTCTCCGATGCGGAGCCCACGCGTCTaGGCCAGGGCTGCGGGAAAC +
Preference number: 4 (lower is better)
Translates to: LRKRLSPRAMGVSLLSPMRSPRV*ARAAGN
Trigger: GTTTCCCGCAGCCCTGGCGCAGACGCGTGGGCTCCG...CATCGGAGAGAGCAGTGACACACCCATTGCCCGGGGGCTGAGTCTCTTCCTCAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000423191.6
CDS-3UTR CCA 90 bp GGGGCCGGGTGTCCAGACATAGGGTACCGTGCGCAGGGCGAGGACAGGGTCCACCGTTGTAGGTCTGGCTaGTTGACAGGAGCTCTGGGT +
Preference number: 4 (lower is better)
Translates to: GAGCPDIGYRAQGEDRVHRCRSG*LTGALG
Trigger: ACCCAGAGCTCCTGTCAACCAGCCAGACCTACAACG...GTGGACCCTGTCCTCGCCCTGCGCACGGTACCCTATGTCTGGACACCCGGCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
CDS-3UTR CCA 90 bp CGGGGGCCGGCCCTCTGGCCCATGCATCTGGGGTGGGTGTCCGTTGGTAAGCGAGGACACCATGATGGCTaGGAGGTCCATGGCCTGATA +
Preference number: 4 (lower is better)
Translates to: RGPALWPMHLGWVSVGKRGHHDG*EVHGLI
Trigger: TATCAGGCCATGGACCTCCCAGCCATCATGGTGTCC...TCGCTTACCAACGGACACCCACCCCAGATGCATGGGCCAGAGGGCCGGCCCCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
CDS-3UTR CCA 90 bp CGAGGACAGGGTCCACAGTTACCCTGGAGCAAGCAGGTCAGCGGGCGGAAGGTTGGGCACTCATGTGGCTaGCCAGCATTGCCGGGCGAC +
Preference number: 4 (lower is better)
Translates to: RGQGPQLPWSKQVSGRKVGHSCG*PALPGD
Trigger: GTCGCCCGGCAATGCTGGCCAGCCACATGAGTGCCC...AACCTTCCGCCCGCTGACCTGCTTGCTCCAGGGTAACTGTGGACCCTGTCCTCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
CDS-3UTR CCA 90 bp TCAGCCCTTCAGGCTCTGAGCAGTGCCTTCCAGCGAGCCTCAGGGATGGTAGGGGGGCACTCATGTGGCTaGCCAGCATTGCCGGGCGAC +
Preference number: 4 (lower is better)
Translates to: SALQALSSAFQRASGMVGGHSCG*PALPGD
Trigger: GTCGCCCGGCAATGCTGGCCAGCCACATGAGTGCCC...CCCTACCATCCCTGAGGCTCGCTGGAAGGCACTGCTCAGAGCCTGAAGGGCTGA
64% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000423191.6
CDS-3UTR CCA 90 bp GGTGGGTGTCCGTTGGTAAGCGACCCCGCCAGGGGCGGCCCACCTGGGCTGGGGGCTTCTGCGGCTCATTaGGGTCCTTCTTTTTCTTCT +
Preference number: 4 (lower is better)
Translates to: GGCPLVSDPARGGPPGLGASAAH*GPSFSS
Trigger: AGAAGAAAAAGAAGGACCCCAATGAGCCGCAGAAGC...CCCCAGCCCAGGTGGGCCGCCCCTGGCGGGGTCGCTTACCAACGGACACCCACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000413823.1
CDS-3UTR CCA 90 bp CGGGGGCCGGCCCTCTGGCCCATGCATCTGGGGTGGGTGTCCGTTGGTAAGCGATGGGTGGGAGCATTTTaGCTGGTGGGTTTGCCTGAG +
Preference number: 4 (lower is better)
Translates to: RGPALWPMHLGWVSVGKRWVGAF*LVGLPE
Trigger: CTCAGGCAAACCCACCAGCCAAAATGCTCCCACCCA...TCGCTTACCAACGGACACCCACCCCAGATGCATGGGCCAGAGGGCCGGCCCCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
CDS-3UTR CCA 90 bp TCAGCCCTTCAGGCTCTGAGCAGTGCCTTCCAGCGAGCCTCAGGGATGGTAGGGCTGGCAGCAGAGACTTaGAGCCCAGCGTCCGGGCGA +
Preference number: 4 (lower is better)
Translates to: SALQALSSAFQRASGMVGLAAET*SPASGR
Trigger: TCGCCCGGACGCTGGGCTCCAAGTCTCTGCTGCCAG...CCCTACCATCCCTGAGGCTCGCTGGAAGGCACTGCTCAGAGCCTGAAGGGCTGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000423191.6
CDS-3UTR CCA 90 bp CCTTCAGGCTCTGAGCAGTGCCTTCCAGCGAGCCTCAGGGATGGTAGGGAGGCGGGACGCACTGAGGCCTaGCAGCAGAGACTTGGAGCC +
Preference number: 4 (lower is better)
Translates to: PSGSEQCLPASLRDGREAGRTEA*QQRLGA
Trigger: GGCTCCAAGTCTCTGCTGCCAGGCCTCAGTGCGTCC...CGCCTCCCTACCATCCCTGAGGCTCGCTGGAAGGCACTGCTCAGAGCCTGAAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000423191.6
CDS-3UTR CCA 90 bp CGAGGACAGGGTCCACAGTTACCCTGGAGCAAGCAGGTCAGCGGGCGGAAGGTTATCGCCAGCTGCACCTaGAGTGCCATGGGGGTGGGC +
Preference number: 4 (lower is better)
Translates to: RGQGPQLPWSKQVSGRKVIASCT*SAMGVG
Trigger: GCCCACCCCCATGGCACTCCAGGTGCAGCTGGCGAT...AACCTTCCGCCCGCTGACCTGCTTGCTCCAGGGTAACTGTGGACCCTGTCCTCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
CDS-3UTR CCA 90 bp TCAGCCCTTCAGGCTCTGAGCAGTGCCTTCCAGCGAGCCTCAGGGATGGTAGGGATCGCCAGCTGCACCTaGAGTGCCATGGGGGTGGGC +
Preference number: 4 (lower is better)
Translates to: SALQALSSAFQRASGMVGIASCT*SAMGVG
Trigger: GCCCACCCCCATGGCACTCCAGGTGCAGCTGGCGAT...CCCTACCATCCCTGAGGCTCGCTGGAAGGCACTGCTCAGAGCCTGAAGGGCTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000423191.6
CDS-3UTR CCA 90 bp CCCGGGCAATGGGTGTGTCACTGCTCTCTCCGATGGGCCACCCTGCCTCTGGCCAGGATCCCGAGCTGCTaGGGAACTCAGAGATGTGCG +
Preference number: 4 (lower is better)
Translates to: PGQWVCHCSLRWATLPLARIPSC*GTQRCA
Trigger: CGCACATCTCTGAGTTCCCCAGCAGCTCGGGATCCT...GGCCAGAGGCAGGGTGGCCCATCGGAGAGAGCAGTGACACACCCATTGCCCGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000423191.6
CDS-3UTR CCA 90 bp GGTCCACAGTTACCCTGGAGCAAGCAGGTCAGCGGGCGGAAGGTTCCTGCAGGTCGCTGCTGGTGGGGTTaGATGGGCCAGGTGAGCAGG +
Preference number: 4 (lower is better)
Translates to: GPQLPWSKQVSGRKVPAGRCWWG*MGQVSR
Trigger: CCTGCTCACCTGGCCCATCCAACCCCACCAGCAGCG...ACCTGCAGGAACCTTCCGCCCGCTGACCTGCTTGCTCCAGGGTAACTGTGGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
CDS-3UTR CCA 90 bp CTGGAGCAAGCAGGTCAGCGGGCGGAAGGTTCCTGCAGGTTCTTTGGGCTGGTGAGTCCCCGCTGCTGGTaGGGTTGGATGGGCCAGGTG +
Preference number: 4 (lower is better)
Translates to: LEQAGQRAEGSCRFFGLVSPRCW*GWMGQV
Trigger: CACCTGGCCCATCCAACCCCACCAGCAGCGGGGACT...CACCAGCCCAAAGAACCTGCAGGAACCTTCCGCCCGCTGACCTGCTTGCTCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
CDS-3UTR CCA 90 bp CGAGGACAGGGTCCACAGTTACCCTGGAGCAAGCAGGTCAGCGGGCGGAAGGTTCACTGCTCTCTCCGATaGGCCACCCTGCCTCTGGCC +
Preference number: 4 (lower is better)
Translates to: RGQGPQLPWSKQVSGRKVHCSLR*ATLPLA
Trigger: GGCCAGAGGCAGGGTGGCCCATCGGAGAGAGCAGTG...AACCTTCCGCCCGCTGACCTGCTTGCTCCAGGGTAACTGTGGACCCTGTCCTCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
CDS-3UTR CCA 90 bp TCAGCCCTTCAGGCTCTGAGCAGTGCCTTCCAGCGAGCCTCAGGGATGGTAGGGCACTGCTCTCTCCGATaGGCCACCCTGCCTCTGGCC +
Preference number: 4 (lower is better)
Translates to: SALQALSSAFQRASGMVGHCSLR*ATLPLA
Trigger: GGCCAGAGGCAGGGTGGCCCATCGGAGAGAGCAGTG...CCCTACCATCCCTGAGGCTCGCTGGAAGGCACTGCTCAGAGCCTGAAGGGCTGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000423191.6
CDS-3UTR CCA 90 bp CCCGGGCAATGGGTGTGTCACTGCTCTCTCCGATGGGCCACCCTGCCTCTGGCCTTCCTGCAGGTTCTTTaGGCTGGTGGTGGGCAGTGG +
Preference number: 4 (lower is better)
Translates to: PGQWVCHCSLRWATLPLAFLQVL*AGGGQW
Trigger: CCACTGCCCACCACCAGCCCAAAGAACCTGCAGGAA...GGCCAGAGGCAGGGTGGCCCATCGGAGAGAGCAGTGACACACCCATTGCCCGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000423191.6
CDS-3UTR CCA 90 bp CTCGCCAGGGCCAGGAAACAGCTGCAAACGACGTCAAGAACCCAAACCCAAACGCGGGGGCCGGCCCTCTaGCCCATGCATCTGGGGTGG +
Preference number: 4 (lower is better)
Translates to: LARARKQLQTTSRTQTQTRGPAL*PMHLGW
Trigger: CCACCCCAGATGCATGGGCCAGAGGGCCGGCCCCCG...CGTTTGGGTTTGGGTTCTTGACGTCGTTTGCAGCTGTTTCCTGGCCCTGGCGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000413823.1
CDS-3UTR CCA 90 bp AGACACTCGCCAGGGCCAGGAAACAGCTGCAAACGACGTCAAGAACCCAAACCCCGGGGGCCGGCCCTCTaGCCCATGCATCTGGGGTGG +
Preference number: 4 (lower is better)
Translates to: RHSPGPGNSCKRRQEPKPRGPAL*PMHLGW
Trigger: CCACCCCAGATGCATGGGCCAGAGGGCCGGCCCCCG...GGGTTTGGGTTCTTGACGTCGTTTGCAGCTGTTTCCTGGCCCTGGCGAGTGTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000413823.1
CDS-3UTR CCA 90 bp CCGGCCCTCTGGCCCATGCATCTGGGGTGGGTGTCCGTTGGTAAGCGACCCCGCGATGACGAAACGGTTTaGCAGCCGCTTTTGTGCGCG +
Preference number: 4 (lower is better)
Translates to: PALWPMHLGWVSVGKRPRDDETV*QPLLCA
Trigger: CGCGCACAAAAGCGGCTGCCAAACCGTTTCGTCATC...GCGGGGTCGCTTACCAACGGACACCCACCCCAGATGCATGGGCCAGAGGGCCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000413823.1
CDS-3UTR CCA 90 bp CGAGGACAGGGTCCACAGTTACCCTGGAGCAAGCAGGTCAGCGGGCGGAAGGTTAGCAGTGCTCCGGGGTaGCTAGCAAGCGTCCGGTCC +
Preference number: 4 (lower is better)
Translates to: RGQGPQLPWSKQVSGRKVSSAPG*LASVRS
Trigger: GGACCGGACGCTTGCTAGCCACCCCGGAGCACTGCT...AACCTTCCGCCCGCTGACCTGCTTGCTCCAGGGTAACTGTGGACCCTGTCCTCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
CDS-3UTR TCA 90 bp CCCGGGCAATGGGTGTGTCACTGCTCTCTCCGATGGGCCACCCTGCCTCTGGCCCCCTTGATGGCGGCCTaGGTGTCTCTGAAGAAGAGT +
Preference number: 4 (lower is better)
Translates to: PGQWVCHCSLRWATLPLAPLMAA*VSLKKS
Trigger: ACTCTTCTTCAGAGACACTCAGGCCGCCATCAAGGG...GGCCAGAGGCAGGGTGGCCCATCGGAGAGAGCAGTGACACACCCATTGCCCGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000423191.6
CDS-3UTR TCA 90 bp CAAGACAGACACTCGCCAGGGCCAGGAAACAGCTGCAAACGACGTCAAGAACCCGCGGCGGGGACGCACTaGGGCCTGGCAGCAGAGACT +
Preference number: 4 (lower is better)
Translates to: QDRHSPGPGNSCKRRQEPAAGTH*GLAAET
Trigger: AGTCTCTGCTGCCAGGCCTCAGTGCGTCCCCGCCGC...GGGTTCTTGACGTCGTTTGCAGCTGTTTCCTGGCCCTGGCGAGTGTCTGTCTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
CDS-3UTR TCA 90 bp AGGTTGAGGAAGAGACTCAGCCCCCGGGCAATGGGTGTGTCACTGCTCTCTCCGGCAGGCTGCAGGTGCTaGTGCCACACTCCCCACTGG +
Preference number: 4 (lower is better)
Translates to: RLRKRLSPRAMGVSLLSPAGCRC*CHTPHW
Trigger: CCAGTGGGGAGTGTGGCATCAGCACCTGCAGCCTGC...CGGAGAGAGCAGTGACACACCCATTGCCCGGGGGCTGAGTCTCTTCCTCAACCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000423191.6
CDS-3UTR GCA 90 bp CTGGAGCAAGCAGGTCAGCGGGCGGAAGGTTCCTGCAGGTTCTTTGGGCTGGTGGGGAGCTGTGGGCGATaGTGCTCCGGATGCCCATCT +
Preference number: 4 (lower is better)
Translates to: LEQAGQRAEGSCRFFGLVGSCGR*CSGCPS
Trigger: AGATGGGCATCCGGAGCAGCATCGCCCACAGCTCCC...CACCAGCCCAAAGAACCTGCAGGAACCTTCCGCCCGCTGACCTGCTTGCTCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
CDS-3UTR GCA 90 bp AGGTTGAGGAAGAGACTCAGCCCCCGGGCAATGGGTGTGTCACTGCTCTCTCCGGGGGGCAGTGACAGCTaGTGGTGCAGTGTGGGGCTG +
Preference number: 4 (lower is better)
Translates to: RLRKRLSPRAMGVSLLSPGGSDS*WCSVGL
Trigger: CAGCCCCACACTGCACCAGCAGCTGTCACTGCCCCC...CGGAGAGAGCAGTGACACACCCATTGCCCGGGGGCTGAGTCTCTTCCTCAACCT
63% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000423191.6
CDS-3UTR GCA 90 bp AGGTTGAGGAAGAGACTCAGCCCCCGGGCAATGGGTGTGTCACTGCTCTCTCCGTGTCCCAGTCCCCGCTaGTGGTGGGGTTGGATGGGC +
Preference number: 4 (lower is better)
Translates to: RLRKRLSPRAMGVSLLSPCPSPR*WWGWMG
Trigger: GCCCATCCAACCCCACCAGCAGCGGGGACTGGGACA...CGGAGAGAGCAGTGACACACCCATTGCCCGGGGGCTGAGTCTCTTCCTCAACCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000423191.6
CDS-3UTR GCA 90 bp CCTTCAGGCTCTGAGCAGTGCCTTCCAGCGAGCCTCAGGGATGGTAGGGAGGCGTCAGGCTCTGAGCAGTaGCTTCCAGCGAGCCTCAGG +
Preference number: 4 (lower is better)
Translates to: PSGSEQCLPASLRDGREASGSEQ*LPASLR
Trigger: CCTGAGGCTCGCTGGAAGGCACTGCTCAGAGCCTGA...CGCCTCCCTACCATCCCTGAGGCTCGCTGGAAGGCACTGCTCAGAGCCTGAAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000423191.6
CDS-3UTR GCA 90 bp CCTTCAGGCTCTGAGCAGTGCCTTCCAGCGAGCCTCAGGGATGGTAGGGAGGCGCGGGCGGAAGGTTCCTaGAGGTTCTTTGGGCTGGTG +
Preference number: 4 (lower is better)
Translates to: PSGSEQCLPASLRDGREARAEGS*RFFGLV
Trigger: CACCAGCCCAAAGAACCTGCAGGAACCTTCCGCCCG...CGCCTCCCTACCATCCCTGAGGCTCGCTGGAAGGCACTGCTCAGAGCCTGAAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000423191.6
CDS-3UTR CCA 90 bp CCCGGGCAATGGGTGTGTCACTGCTCTCTCCGATGGGCCACCCTGCCTCTGGCCGGACACCATGATGGCTaGGAGGTCCATGGCCTGATA +
Preference number: 4 (lower is better)
Translates to: PGQWVCHCSLRWATLPLAGHHDG*EVHGLI
Trigger: TATCAGGCCATGGACCTCCCAGCCATCATGGTGTCC...GGCCAGAGGCAGGGTGGCCCATCGGAGAGAGCAGTGACACACCCATTGCCCGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000423191.6
CDS-3UTR CCA 90 bp CCTTCAGGCTCTGAGCAGTGCCTTCCAGCGAGCCTCAGGGATGGTAGGGAGGCGTGGCCCGACAGCAGGTaGCTGTCCTGTGCTAGCATG +
Preference number: 4 (lower is better)
Translates to: PSGSEQCLPASLRDGREAWPDSR*LSCASM
Trigger: CATGCTAGCACAGGACAGCCACCTGCTGTCGGGCCA...CGCCTCCCTACCATCCCTGAGGCTCGCTGGAAGGCACTGCTCAGAGCCTGAAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000423191.6
CDS-3UTR CCA 90 bp CAGTGCTCCGGGGTGGCTAGCAAGCGTCCGGTCCTTGCTGTGAGGATGACGAAATGGATCGTGGGCAGCTaGCCCGACAGCAGGTGGCTG +
Preference number: 4 (lower is better)
Translates to: QCSGVASKRPVLAVRMTKWIVGS*PDSRWL
Trigger: CAGCCACCTGCTGTCGGGCCAGCTGCCCACGATCCA...TTTCGTCATCCTCACAGCAAGGACCGGACGCTTGCTAGCCACCCCGGAGCACTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
CDS-3UTR CCA 90 bp GAGGTTGAGGAAGAGACTCAGCCCCCGGGCAATGGGTGTGTCACTGCTCTCTCCGGGCACTCATGTGGCTaGCCAGCATTGCCGGGCGAC +
Preference number: 4 (lower is better)
Translates to: EVEEETQPPGNGCVTALSGHSCG*PALPGD
Trigger: GTCGCCCGGCAATGCTGGCCAGCCACATGAGTGCCC...GGAGAGAGCAGTGACACACCCATTGCCCGGGGGCTGAGTCTCTTCCTCAACCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000423191.6
CDS-3UTR CCA 90 bp TCAGCCCTTCAGGCTCTGAGCAGTGCCTTCCAGCGAGCCTCAGGGATGGTAGGGCTTCCTGAGTGGAGCTaGAGGGAGAGGGGGTCGCTG +
Preference number: 4 (lower is better)
Translates to: SALQALSSAFQRASGMVGLPEWS*RERGSL
Trigger: CAGCGACCCCCTCTCCCTCCAGCTCCACTCAGGAAG...CCCTACCATCCCTGAGGCTCGCTGGAAGGCACTGCTCAGAGCCTGAAGGGCTGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000423191.6
CDS-3UTR CCA 90 bp GAGGTTGAGGAAGAGACTCAGCCCCCGGGCAATGGGTGTGTCACTGCTCTCTCCCTGGCAGCAGAGACTTaGAGCCCAGCGTCCGGGCGA +
Preference number: 4 (lower is better)
Translates to: EVEEETQPPGNGCVTALSLAAET*SPASGR
Trigger: TCGCCCGGACGCTGGGCTCCAAGTCTCTGCTGCCAG...GGAGAGAGCAGTGACACACCCATTGCCCGGGGGCTGAGTCTCTTCCTCAACCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000423191.6
CDS-3UTR CCA 90 bp AGACACTCGCCAGGGCCAGGAAACAGCTGCAAACGACGTCAAGAACCCAAACCCGGAGTGCCATGGGGGTaGGCAGGACAGGGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: RHSPGPGNSCKRRQEPKPGVPWG*AGQGAG
Trigger: CCCAGCCCCCTGTCCTGCCCACCCCCATGGCACTCC...GGGTTTGGGTTCTTGACGTCGTTTGCAGCTGTTTCCTGGCCCTGGCGAGTGTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
CDS-3UTR CCA 90 bp CAGTGCTCCGGGGTGGCTAGCAAGCGTCCGGTCCTTGCTGTGAGGATGACGAAAATCGCCAGCTGCACCTaGAGTGCCATGGGGGTGGGC +
Preference number: 4 (lower is better)
Translates to: QCSGVASKRPVLAVRMTKIASCT*SAMGVG
Trigger: GCCCACCCCCATGGCACTCCAGGTGCAGCTGGCGAT...TTTCGTCATCCTCACAGCAAGGACCGGACGCTTGCTAGCCACCCCGGAGCACTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
CDS-3UTR CCA 90 bp GAGGTTGAGGAAGAGACTCAGCCCCCGGGCAATGGGTGTGTCACTGCTCTCTCCAGTCCCCGCTGCTGGTaGGGTTGGATGGGCCAGGTG +
Preference number: 4 (lower is better)
Translates to: EVEEETQPPGNGCVTALSSPRCW*GWMGQV
Trigger: CACCTGGCCCATCCAACCCCACCAGCAGCGGGGACT...GGAGAGAGCAGTGACACACCCATTGCCCGGGGGCTGAGTCTCTTCCTCAACCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000423191.6
CDS-3UTR CCA 90 bp AGGTTGAGGAAGAGACTCAGCCCCCGGGCAATGGGTGTGTCACTGCTCTCTCCGAGTCCCCGCTGCTGGTaGGGTTGGATGGGCCAGGTG +
Preference number: 4 (lower is better)
Translates to: RLRKRLSPRAMGVSLLSPSPRCW*GWMGQV
Trigger: CACCTGGCCCATCCAACCCCACCAGCAGCGGGGACT...CGGAGAGAGCAGTGACACACCCATTGCCCGGGGGCTGAGTCTCTTCCTCAACCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000423191.6
CDS-3UTR CCA 90 bp CCTTCAGGCTCTGAGCAGTGCCTTCCAGCGAGCCTCAGGGATGGTAGGGAGGCGTCAGCCCCCGGGCAATaGGTGTGTCACTGCTCTCTC +
Preference number: 4 (lower is better)
Translates to: PSGSEQCLPASLRDGREASAPGQ*VCHCSL
Trigger: GAGAGAGCAGTGACACACCCATTGCCCGGGGGCTGA...CGCCTCCCTACCATCCCTGAGGCTCGCTGGAAGGCACTGCTCAGAGCCTGAAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000423191.6
CDS-3UTR CCA 90 bp CTGGAGCAAGCAGGTCAGCGGGCGGAAGGTTCCTGCAGGTTCTTTGGGCTGGTGTCTTTGGGCTGGTGGTaGGCAGTGGGCTGCCTCTGC +
Preference number: 4 (lower is better)
Translates to: LEQAGQRAEGSCRFFGLVSLGWW*AVGCLC
Trigger: GCAGAGGCAGCCCACTGCCCACCACCAGCCCAAAGA...CACCAGCCCAAAGAACCTGCAGGAACCTTCCGCCCGCTGACCTGCTTGCTCCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
CDS-3UTR CCA 90 bp GGTCCACAGTTACCCTGGAGCAAGCAGGTCAGCGGGCGGAAGGTTCCTGCAGGTGGTTCTTTGGGCTGGTaGTGGGCAGTGGGCTGCCTC +
Preference number: 4 (lower is better)
Translates to: GPQLPWSKQVSGRKVPAGGSLGW*WAVGCL
Trigger: GAGGCAGCCCACTGCCCACCACCAGCCCAAAGAACC...ACCTGCAGGAACCTTCCGCCCGCTGACCTGCTTGCTCCAGGGTAACTGTGGACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
CDS-3UTR CCA 90 bp AAGCGTCCGGTCCTTGCTGTGAGGATGACGAAACGGTTTGGCAGCCGCTTTTGTCGGGGGCCGGCCCTCTaGCCCATGCATCTGGGGTGG +
Preference number: 4 (lower is better)
Translates to: KRPVLAVRMTKRFGSRFCRGPAL*PMHLGW
Trigger: CCACCCCAGATGCATGGGCCAGAGGGCCGGCCCCCG...ACAAAAGCGGCTGCCAAACCGTTTCGTCATCCTCACAGCAAGGACCGGACGCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000413823.1
CDS-3UTR CCA 90 bp CCCGGGCAATGGGTGTGTCACTGCTCTCTCCGATGGGCCACCCTGCCTCTGGCCGATGACGAAACGGTTTaGCAGCCGCTTTTGTGCGCG +
Preference number: 4 (lower is better)
Translates to: PGQWVCHCSLRWATLPLADDETV*QPLLCA
Trigger: CGCGCACAAAAGCGGCTGCCAAACCGTTTCGTCATC...GGCCAGAGGCAGGGTGGCCCATCGGAGAGAGCAGTGACACACCCATTGCCCGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
CDS-3UTR TCA 90 bp CCCGGGCAATGGGTGTGTCACTGCTCTCTCCGATGGGCCACCCTGCCTCTGGCCTTTTCCTGGGTCGGCTaGAGGTCTCTTTTCTCCCGA +
Preference number: 4 (lower is better)
Translates to: PGQWVCHCSLRWATLPLAFSWVG*RSLFSR
Trigger: TCGGGAGAAAAGAGACCTTCAGCCGACCCAGGAAAA...GGCCAGAGGCAGGGTGGCCCATCGGAGAGAGCAGTGACACACCCATTGCCCGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000423191.6
CDS-3UTR TCA 90 bp ACTCGCCAGGGCCAGGAAACAGCTGCAAACGACGTCAAGAACCCAAACCCAAACGCGGCGGGGACGCACTaGGGCCTGGCAGCAGAGACT +
Preference number: 4 (lower is better)
Translates to: TRQGQETAANDVKNPNPNAAGTH*GLAAET
Trigger: AGTCTCTGCTGCCAGGCCTCAGTGCGTCCCCGCCGC...GTTTGGGTTTGGGTTCTTGACGTCGTTTGCAGCTGTTTCCTGGCCCTGGCGAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
CDS-3UTR TCA 90 bp AGGTTGAGGAAGAGACTCAGCCCCCGGGCAATGGGTGTGTCACTGCTCTCTCCGGTTGGATGGGCCAGGTaGGCAGGATCCCGAGCTGCT +
Preference number: 4 (lower is better)
Translates to: RLRKRLSPRAMGVSLLSPVGWAR*AGSRAA
Trigger: AGCAGCTCGGGATCCTGCTCACCTGGCCCATCCAAC...CGGAGAGAGCAGTGACACACCCATTGCCCGGGGGCTGAGTCTCTTCCTCAACCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000423191.6
CDS-3UTR TCA 90 bp GGAGAGCAGTGCTCCGGGGTGGCTAGCAAGCGTCCGGTCCTTGCTGTGAGGATGGGAGGCGGGATTAGGTaGGGTAGAGCGATTTGTCCC +
Preference number: 4 (lower is better)
Translates to: GEQCSGVASKRPVLAVRMGGGIR*GRAICP
Trigger: GGGACAAATCGCTCTACCTCACCTAATCCCGCCTCC...CATCCTCACAGCAAGGACCGGACGCTTGCTAGCCACCCCGGAGCACTGCTCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000413823.1
CDS-3UTR TCA 90 bp GAGGTTGAGGAAGAGACTCAGCCCCCGGGCAATGGGTGTGTCACTGCTCTCTCCCAGCCCTTCAGGCTCTaGGCAGTGCCTTCCAGCGAG +
Preference number: 4 (lower is better)
Translates to: EVEEETQPPGNGCVTALSQPFRL*AVPSSE
Trigger: CTCGCTGGAAGGCACTGCTCAGAGCCTGAAGGGCTG...GGAGAGAGCAGTGACACACCCATTGCCCGGGGGCTGAGTCTCTTCCTCAACCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000423191.6
CDS-3UTR TCA 90 bp CAGTGCTCCGGGGTGGCTAGCAAGCGTCCGGTCCTTGCTGTGAGGATGACGAAACAGCCCTTCAGGCTCTaGGCAGTGCCTTCCAGCGAG +
Preference number: 4 (lower is better)
Translates to: QCSGVASKRPVLAVRMTKQPFRL*AVPSSE
Trigger: CTCGCTGGAAGGCACTGCTCAGAGCCTGAAGGGCTG...TTTCGTCATCCTCACAGCAAGGACCGGACGCTTGCTAGCCACCCCGGAGCACTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000413823.1
CDS-3UTR GCA 90 bp AGGTTGAGGAAGAGACTCAGCCCCCGGGCAATGGGTGTGTCACTGCTCTCTCCGGGGAGCTGTGGGCGATaGTGCTCCGGATGCCCATCT +
Preference number: 4 (lower is better)
Translates to: RLRKRLSPRAMGVSLLSPGSCGR*CSGCPS
Trigger: AGATGGGCATCCGGAGCAGCATCGCCCACAGCTCCC...CGGAGAGAGCAGTGACACACCCATTGCCCGGGGGCTGAGTCTCTTCCTCAACCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000423191.6
CDS-3UTR GCA 90 bp TGTCCAGACATAGGGTACCGTGCGCAGGGCGAGGACAGGGTCCACAGTTACCCTGGGAGCTGTGGGCGATaGTGCTCCGGATGCCCATCT +
Preference number: 4 (lower is better)
Translates to: CPDIGYRAQGEDRVHSYPGSCGR*CSGCPS
Trigger: AGATGGGCATCCGGAGCAGCATCGCCCACAGCTCCC...AGGGTAACTGTGGACCCTGTCCTCGCCCTGCGCACGGTACCCTATGTCTGGACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
CDS-3UTR GCA 90 bp CGGGGGCCGGCCCTCTGGCCCATGCATCTGGGGTGGGTGTCCGTTGGTAAGCGAGTGGGTTTGCCTGAGTaGTCTTGGTCTCACCTTGAT +
Preference number: 4 (lower is better)
Translates to: RGPALWPMHLGWVSVGKRVGLPE*SWSHLD
Trigger: ATCAAGGTGAGACCAAGAGCACTCAGGCAAACCCAC...TCGCTTACCAACGGACACCCACCCCAGATGCATGGGCCAGAGGGCCGGCCCCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
CDS-3UTR GCA 90 bp GGCCGGCCCTCTGGCCCATGCATCTGGGGTGGGTGTCCGTTGGTAAGCGACCCCATGGCATACATGGGCTaGTTGGGTGGGAGCATTTTG +
Preference number: 4 (lower is better)
Translates to: GRPSGPCIWGGCPLVSDPMAYMG*LGGSIL
Trigger: CAAAATGCTCCCACCCAAGCAGCCCATGTATGCCAT...GGGGTCGCTTACCAACGGACACCCACCCCAGATGCATGGGCCAGAGGGCCGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
CDS-3UTR GCA 90 bp CCTTCAGGCTCTGAGCAGTGCCTTCCAGCGAGCCTCAGGGATGGTAGGGAGGCGGGGAACTCAGAGATGTaGGGGAAGTCCTGTGGCCCT +
Preference number: 4 (lower is better)
Translates to: PSGSEQCLPASLRDGREAGNSEM*GKSCGP
Trigger: AGGGCCACAGGACTTCCCGCACATCTCTGAGTTCCC...CGCCTCCCTACCATCCCTGAGGCTCGCTGGAAGGCACTGCTCAGAGCCTGAAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000423191.6
CDS-3UTR GCA 90 bp GGAGAGCAGTGCTCCGGGGTGGCTAGCAAGCGTCCGGTCCTTGCTGTGAGGATGCCAGGGCCTCTTTTCTaGTGTCAGCCCTTCAGGCTC +
Preference number: 4 (lower is better)
Translates to: GEQCSGVASKRPVLAVRMPGPLF*CQPFRL
Trigger: GAGCCTGAAGGGCTGACAGCAGAAAAGAGGCCCTGG...CATCCTCACAGCAAGGACCGGACGCTTGCTAGCCACCCCGGAGCACTGCTCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000413823.1
CDS-3UTR GCA 90 bp CCTTCAGGCTCTGAGCAGTGCCTTCCAGCGAGCCTCAGGGATGGTAGGGAGGCGCCAGGGCCTCTTTTCTaGTGTCAGCCCTTCAGGCTC +
Preference number: 4 (lower is better)
Translates to: PSGSEQCLPASLRDGREAPGPLF*CQPFRL
Trigger: GAGCCTGAAGGGCTGACAGCAGAAAAGAGGCCCTGG...CGCCTCCCTACCATCCCTGAGGCTCGCTGGAAGGCACTGCTCAGAGCCTGAAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000423191.6
CDS-3UTR GCA 90 bp CCTTCAGGCTCTGAGCAGTGCCTTCCAGCGAGCCTCAGGGATGGTAGGGAGGCGCAATGGGTGTGTCACTaGTCTCTCCGATGGGCCACC +
Preference number: 4 (lower is better)
Translates to: PSGSEQCLPASLRDGREAQWVCH*SLRWAT
Trigger: GGTGGCCCATCGGAGAGAGCAGTGACACACCCATTG...CGCCTCCCTACCATCCCTGAGGCTCGCTGGAAGGCACTGCTCAGAGCCTGAAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000423191.6
CDS-3UTR GCA 90 bp CGAGGACAGGGTCCACAGTTACCCTGGAGCAAGCAGGTCAGCGGGCGGAAGGTTGCAGTGGGCTGCCTCTaGAGAGTCTGGTGGGAGGTT +
Preference number: 4 (lower is better)
Translates to: RGQGPQLPWSKQVSGRKVAVGCL*RVWWEV
Trigger: AACCTCCCACCAGACTCTGCAGAGGCAGCCCACTGC...AACCTTCCGCCCGCTGACCTGCTTGCTCCAGGGTAACTGTGGACCCTGTCCTCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
CDS-3UTR GCA 90 bp GAGGTTGAGGAAGAGACTCAGCCCCCGGGCAATGGGTGTGTCACTGCTCTCTCCTGGTGGGCAGTGGGCTaGCTCTGCAGAGTCTGGTGG +
Preference number: 4 (lower is better)
Translates to: EVEEETQPPGNGCVTALSWWAVG*LCRVWW
Trigger: CCACCAGACTCTGCAGAGGCAGCCCACTGCCCACCA...GGAGAGAGCAGTGACACACCCATTGCCCGGGGGCTGAGTCTCTTCCTCAACCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000423191.6
CDS-3UTR CCA 90 bp GAGGTTGAGGAAGAGACTCAGCCCCCGGGCAATGGGTGTGTCACTGCTCTCTCCCCATCTCCTGGATCGTaGGCAGCTGGCCCGACAGCA +
Preference number: 4 (lower is better)
Translates to: EVEEETQPPGNGCVTALSPSPGS*AAGPTA
Trigger: TGCTGTCGGGCCAGCTGCCCACGATCCAGGAGATGG...GGAGAGAGCAGTGACACACCCATTGCCCGGGGGCTGAGTCTCTTCCTCAACCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000423191.6
CDS-3UTR CCA 90 bp CCTTCAGGCTCTGAGCAGTGCCTTCCAGCGAGCCTCAGGGATGGTAGGGAGGCGGCAGCCACTTCCGAGTaGACCATCTCCTGGATCGTG +
Preference number: 4 (lower is better)
Translates to: PSGSEQCLPASLRDGREAAATSE*TISWIV
Trigger: CACGATCCAGGAGATGGTCCACTCGGAAGTGGCTGC...CGCCTCCCTACCATCCCTGAGGCTCGCTGGAAGGCACTGCTCAGAGCCTGAAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000423191.6
CDS-3UTR CCA 90 bp GAGGTTGAGGAAGAGACTCAGCCCCCGGGCAATGGGTGTGTCACTGCTCTCTCCGGTGATGGGGAGCTGTaGGCGATGCTGCTCCGGATG +
Preference number: 4 (lower is better)
Translates to: EVEEETQPPGNGCVTALSGDGEL*AMLLRM
Trigger: CATCCGGAGCAGCATCGCCCACAGCTCCCCATCACC...GGAGAGAGCAGTGACACACCCATTGCCCGGGGGCTGAGTCTCTTCCTCAACCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000423191.6
CDS-3UTR CCA 90 bp TGTCCAGACATAGGGTACCGTGCGCAGGGCGAGGACAGGGTCCACAGTTACCCTCTTCCTGAGTGGAGCTaGAGGGAGAGGGGGTCGCTG +
Preference number: 4 (lower is better)
Translates to: CPDIGYRAQGEDRVHSYPLPEWS*RERGSL
Trigger: CAGCGACCCCCTCTCCCTCCAGCTCCACTCAGGAAG...AGGGTAACTGTGGACCCTGTCCTCGCCCTGCGCACGGTACCCTATGTCTGGACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
CDS-3UTR CCA 90 bp CCCGGGCAATGGGTGTGTCACTGCTCTCTCCGATGGGCCACCCTGCCTCTGGCCTGGAGGCCACGATTTTaGACACGTCACCGAAAGTGG +
Preference number: 4 (lower is better)
Translates to: PGQWVCHCSLRWATLPLAWRPRF*TRHRKW
Trigger: CCACTTTCGGTGACGTGTCCAAAATCGTGGCCTCCA...GGCCAGAGGCAGGGTGGCCCATCGGAGAGAGCAGTGACACACCCATTGCCCGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000423191.6
CDS-3UTR CCA 90 bp GGGGCCGGGTGTCCAGACATAGGGTACCGTGCGCAGGGCGAGGACAGGGTCCACGAGCATTTTGGCTGGTaGGTTTGCCTGAGTGCTCTT +
Preference number: 4 (lower is better)
Translates to: GAGCPDIGYRAQGEDRVHEHFGW*VCLSAL
Trigger: AAGAGCACTCAGGCAAACCCACCAGCCAAAATGCTC...GTGGACCCTGTCCTCGCCCTGCGCACGGTACCCTATGTCTGGACACCCGGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
CDS-3UTR CCA 90 bp CCCGGGCAATGGGTGTGTCACTGCTCTCTCCGATGGGCCACCCTGCCTCTGGCCCATACATGGGCTGCTTaGGTGGGAGCATTTTGGCTG +
Preference number: 4 (lower is better)
Translates to: PGQWVCHCSLRWATLPLAHTWAA*VGAFWL
Trigger: CAGCCAAAATGCTCCCACCCAAGCAGCCCATGTATG...GGCCAGAGGCAGGGTGGCCCATCGGAGAGAGCAGTGACACACCCATTGCCCGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000423191.6
CDS-3UTR CCA 90 bp CTGGAGCAAGCAGGTCAGCGGGCGGAAGGTTCCTGCAGGTTCTTTGGGCTGGTGAGGCCAGGCCTGGCATaGCATACATGGGCTGCTTGG +
Preference number: 4 (lower is better)
Translates to: LEQAGQRAEGSCRFFGLVRPGLA*HTWAAW
Trigger: CCAAGCAGCCCATGTATGCCATGCCAGGCCTGGCCT...CACCAGCCCAAAGAACCTGCAGGAACCTTCCGCCCGCTGACCTGCTTGCTCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
CDS-3UTR CCA 90 bp CACAGTTACCCTGGAGCAAGCAGGTCAGCGGGCGGAAGGTTCCTGCAGGTTCTTCTGGCAGCAGAGACTTaGAGCCCAGCGTCCGGGCGA +
Preference number: 4 (lower is better)
Translates to: HSYPGASRSAGGRFLQVLLAAET*SPASGR
Trigger: TCGCCCGGACGCTGGGCTCCAAGTCTCTGCTGCCAG...AAGAACCTGCAGGAACCTTCCGCCCGCTGACCTGCTTGCTCCAGGGTAACTGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
CDS-3UTR CCA 90 bp TGTCCAGACATAGGGTACCGTGCGCAGGGCGAGGACAGGGTCCACAGTTACCCTGGACGCACTGAGGCCTaGCAGCAGAGACTTGGAGCC +
Preference number: 4 (lower is better)
Translates to: CPDIGYRAQGEDRVHSYPGRTEA*QQRLGA
Trigger: GGCTCCAAGTCTCTGCTGCCAGGCCTCAGTGCGTCC...AGGGTAACTGTGGACCCTGTCCTCGCCCTGCGCACGGTACCCTATGTCTGGACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
CDS-3UTR CCA 90 bp TCAGCCCTTCAGGCTCTGAGCAGTGCCTTCCAGCGAGCCTCAGGGATGGTAGGGGGACATGCTAACAGGTaGACTGAGGAGGGCGCCCTG +
Preference number: 4 (lower is better)
Translates to: SALQALSSAFQRASGMVGGHANR*TEEGAL
Trigger: CAGGGCGCCCTCCTCAGTCCACCTGTTAGCATGTCC...CCCTACCATCCCTGAGGCTCGCTGGAAGGCACTGCTCAGAGCCTGAAGGGCTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000423191.6
CDS-3UTR CCA 90 bp TTGAGGAAGAGACTCAGCCCCCGGGCAATGGGTGTGTCACTGCTCTCTCCGATGCGCTGCTGGTGGGGTTaGATGGGCCAGGTGAGCAGG +
Preference number: 4 (lower is better)
Translates to: LRKRLSPRAMGVSLLSPMRCWWG*MGQVSR
Trigger: CCTGCTCACCTGGCCCATCCAACCCCACCAGCAGCG...CATCGGAGAGAGCAGTGACACACCCATTGCCCGGGGGCTGAGTCTCTTCCTCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000423191.6
CDS-3UTR CCA 90 bp CAGACACTCGCCAGGGCCAGGAAACAGCTGCAAACGACGTCAAGAACCCAAACCCCCAGTCCCCGCTGCTaGTGGGGTTGGATGGGCCAG +
Preference number: 4 (lower is better)
Translates to: QTLARARKQLQTTSRTQTPSPRC*WGWMGQ
Trigger: CTGGCCCATCCAACCCCACCAGCAGCGGGGACTGGG...GGTTTGGGTTCTTGACGTCGTTTGCAGCTGTTTCCTGGCCCTGGCGAGTGTCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000413823.1
CDS-3UTR CCA 90 bp AGGTTGAGGAAGAGACTCAGCCCCCGGGCAATGGGTGTGTCACTGCTCTCTCCGTCTTTGGGCTGGTGGTaGGCAGTGGGCTGCCTCTGC +
Preference number: 4 (lower is better)
Translates to: RLRKRLSPRAMGVSLLSPSLGWW*AVGCLC
Trigger: GCAGAGGCAGCCCACTGCCCACCACCAGCCCAAAGA...CGGAGAGAGCAGTGACACACCCATTGCCCGGGGGCTGAGTCTCTTCCTCAACCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000423191.6
CDS-3UTR CCA 90 bp AGGTTGAGGAAGAGACTCAGCCCCCGGGCAATGGGTGTGTCACTGCTCTCTCCGGGTTCTTTGGGCTGGTaGTGGGCAGTGGGCTGCCTC +
Preference number: 4 (lower is better)
Translates to: RLRKRLSPRAMGVSLLSPGSLGW*WAVGCL
Trigger: GAGGCAGCCCACTGCCCACCACCAGCCCAAAGAACC...CGGAGAGAGCAGTGACACACCCATTGCCCGGGGGCTGAGTCTCTTCCTCAACCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000423191.6
CDS-3UTR CCA 90 bp CCTTCAGGCTCTGAGCAGTGCCTTCCAGCGAGCCTCAGGGATGGTAGGGAGGCGTTCCTGCAGGTTCTTTaGGCTGGTGGTGGGCAGTGG +
Preference number: 4 (lower is better)
Translates to: PSGSEQCLPASLRDGREAFLQVL*AGGGQW
Trigger: CCACTGCCCACCACCAGCCCAAAGAACCTGCAGGAA...CGCCTCCCTACCATCCCTGAGGCTCGCTGGAAGGCACTGCTCAGAGCCTGAAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000423191.6
CDS-3UTR CCA 90 bp GGAGAGCAGTGCTCCGGGGTGGCTAGCAAGCGTCCGGTCCTTGCTGTGAGGATGCCCATGCATCTGGGGTaGGTGTCCGTTGGTAAGCGA +
Preference number: 4 (lower is better)
Translates to: GEQCSGVASKRPVLAVRMPMHLG*VSVGKR
Trigger: TCGCTTACCAACGGACACCCACCCCAGATGCATGGG...CATCCTCACAGCAAGGACCGGACGCTTGCTAGCCACCCCGGAGCACTGCTCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000413823.1
CDS-3UTR TCA 90 bp TCAGCCCTTCAGGCTCTGAGCAGTGCCTTCCAGCGAGCCTCAGGGATGGTAGGGGTAGGTCTGGCTGGTTaGCAGGAGCTCTGGGTTTCC +
Preference number: 4 (lower is better)
Translates to: SALQALSSAFQRASGMVGVGLAG*QELWVS
Trigger: GGAAACCCAGAGCTCCTGTCAACCAGCCAGACCTAC...CCCTACCATCCCTGAGGCTCGCTGGAAGGCACTGCTCAGAGCCTGAAGGGCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000423191.6
CDS-3UTR TCA 90 bp GAGGTTGAGGAAGAGACTCAGCCCCCGGGCAATGGGTGTGTCACTGCTCTCTCCTGGGGTTCTGACCCTTaGTGGCGGCCTGAGTGTCTC +
Preference number: 4 (lower is better)
Translates to: EVEEETQPPGNGCVTALSWGSDP*WRPECL
Trigger: GAGACACTCAGGCCGCCATCAAGGGTCAGAACCCCA...GGAGAGAGCAGTGACACACCCATTGCCCGGGGGCTGAGTCTCTTCCTCAACCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000423191.6
CDS-3UTR TCA 90 bp TCAGCCCTTCAGGCTCTGAGCAGTGCCTTCCAGCGAGCCTCAGGGATGGTAGGGGGAGGCGGGATTAGGTaGGGTAGAGCGATTTGTCCC +
Preference number: 4 (lower is better)
Translates to: SALQALSSAFQRASGMVGGGGIR*GRAICP
Trigger: GGGACAAATCGCTCTACCTCACCTAATCCCGCCTCC...CCCTACCATCCCTGAGGCTCGCTGGAAGGCACTGCTCAGAGCCTGAAGGGCTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000423191.6
CDS-3UTR GCA 90 bp CACAGTTACCCTGGAGCAAGCAGGTCAGCGGGCGGAAGGTTCCTGCAGGTTCTTAGCTGTGGGCGATGCTaGTCCGGATGCCCATCTGCG +
Preference number: 4 (lower is better)
Translates to: HSYPGASRSAGGRFLQVLSCGRC*SGCPSA
Trigger: CGCAGATGGGCATCCGGAGCAGCATCGCCCACAGCT...AAGAACCTGCAGGAACCTTCCGCCCGCTGACCTGCTTGCTCCAGGGTAACTGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
CDS-3UTR GCA 90 bp TTGAGGAAGAGACTCAGCCCCCGGGCAATGGGTGTGTCACTGCTCTCTCCGATGAGCTGTGGGCGATGCTaGTCCGGATGCCCATCTGCG +
Preference number: 4 (lower is better)
Translates to: LRKRLSPRAMGVSLLSPMSCGRC*SGCPSA
Trigger: CGCAGATGGGCATCCGGAGCAGCATCGCCCACAGCT...CATCGGAGAGAGCAGTGACACACCCATTGCCCGGGGGCTGAGTCTCTTCCTCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000423191.6
CDS-3UTR GCA 90 bp CCCGGGCAATGGGTGTGTCACTGCTCTCTCCGATGGGCCACCCTGCCTCTGGCCGTGGGTTTGCCTGAGTaGTCTTGGTCTCACCTTGAT +
Preference number: 4 (lower is better)
Translates to: PGQWVCHCSLRWATLPLAVGLPE*SWSHLD
Trigger: ATCAAGGTGAGACCAAGAGCACTCAGGCAAACCCAC...GGCCAGAGGCAGGGTGGCCCATCGGAGAGAGCAGTGACACACCCATTGCCCGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000423191.6
CDS-3UTR GCA 90 bp AGACACTCGCCAGGGCCAGGAAACAGCTGCAAACGACGTCAAGAACCCAAACCCGGGGGCAGTGACAGCTaGTGGTGCAGTGTGGGGCTG +
Preference number: 4 (lower is better)
Translates to: RHSPGPGNSCKRRQEPKPGGSDS*WCSVGL
Trigger: CAGCCCCACACTGCACCAGCAGCTGTCACTGCCCCC...GGGTTTGGGTTCTTGACGTCGTTTGCAGCTGTTTCCTGGCCCTGGCGAGTGTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
CDS-3UTR GCA 90 bp TCAGCCCTTCAGGCTCTGAGCAGTGCCTTCCAGCGAGCCTCAGGGATGGTAGGGGGGAACTCAGAGATGTaGGGGAAGTCCTGTGGCCCT +
Preference number: 4 (lower is better)
Translates to: SALQALSSAFQRASGMVGGNSEM*GKSCGP
Trigger: AGGGCCACAGGACTTCCCGCACATCTCTGAGTTCCC...CCCTACCATCCCTGAGGCTCGCTGGAAGGCACTGCTCAGAGCCTGAAGGGCTGA
61% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000423191.6
CDS-3UTR GCA 90 bp CCTTCAGGCTCTGAGCAGTGCCTTCCAGCGAGCCTCAGGGATGGTAGGGAGGCGAGCAGGATCCCGAGCTaGTGGGGAACTCAGAGATGT +
Preference number: 4 (lower is better)
Translates to: PSGSEQCLPASLRDGREASRIPS*WGTQRC
Trigger: ACATCTCTGAGTTCCCCAGCAGCTCGGGATCCTGCT...CGCCTCCCTACCATCCCTGAGGCTCGCTGGAAGGCACTGCTCAGAGCCTGAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000423191.6
CDS-3UTR GCA 90 bp GACACTCGCCAGGGCCAGGAAACAGCTGCAAACGACGTCAAGAACCCAAACCCATCCGATGGGCCACCCTaGCTCTGGCCAGGGCCTCTT +
Preference number: 4 (lower is better)
Translates to: DTRQGQETAANDVKNPNPSDGPP*LWPGPL
Trigger: AAGAGGCCCTGGCCAGAGGCAGGGTGGCCCATCGGA...TGGGTTTGGGTTCTTGACGTCGTTTGCAGCTGTTTCCTGGCCCTGGCGAGTGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000413823.1
CDS-3UTR GCA 90 bp GGTCCACAGTTACCCTGGAGCAAGCAGGTCAGCGGGCGGAAGGTTCCTGCAGGTCAATGGGTGTGTCACTaGTCTCTCCGATGGGCCACC +
Preference number: 4 (lower is better)
Translates to: GPQLPWSKQVSGRKVPAGQWVCH*SLRWAT
Trigger: GGTGGCCCATCGGAGAGAGCAGTGACACACCCATTG...ACCTGCAGGAACCTTCCGCCCGCTGACCTGCTTGCTCCAGGGTAACTGTGGACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
CDS-3UTR GCA 90 bp GAGGTTGAGGAAGAGACTCAGCCCCCGGGCAATGGGTGTGTCACTGCTCTCTCCGCAGTGGGCTGCCTCTaGAGAGTCTGGTGGGAGGTT +
Preference number: 4 (lower is better)
Translates to: EVEEETQPPGNGCVTALSAVGCL*RVWWEV
Trigger: AACCTCCCACCAGACTCTGCAGAGGCAGCCCACTGC...GGAGAGAGCAGTGACACACCCATTGCCCGGGGGCTGAGTCTCTTCCTCAACCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000423191.6
CDS-3UTR GCA 90 bp TCCGGGGTGGCTAGCAAGCGTCCGGTCCTTGCTGTGAGGATGACGAAACGGTTTTGGTGGGCAGTGGGCTaGCTCTGCAGAGTCTGGTGG +
Preference number: 4 (lower is better)
Translates to: SGVASKRPVLAVRMTKRFWWAVG*LCRVWW
Trigger: CCACCAGACTCTGCAGAGGCAGCCCACTGCCCACCA...AAACCGTTTCGTCATCCTCACAGCAAGGACCGGACGCTTGCTAGCCACCCCGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000413823.1
CDS-3UTR GCA 90 bp CAAGACAGACACTCGCCAGGGCCAGGAAACAGCTGCAAACGACGTCAAGAACCCCGATGTGCACATCTATaGCGGGGGCCGGCCCTCTGG +
Preference number: 4 (lower is better)
Translates to: QDRHSPGPGNSCKRRQEPRCAHL*RGPALW
Trigger: CCAGAGGGCCGGCCCCCGGCATAGATGTGCACATCG...GGGTTCTTGACGTCGTTTGCAGCTGTTTCCTGGCCCTGGCGAGTGTCTGTCTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000413823.1
CDS-3UTR GCA 90 bp GGAGAGCAGTGCTCCGGGGTGGCTAGCAAGCGTCCGGTCCTTGCTGTGAGGATGACTGGAAAACCGATGTaGACATCTATGCCGGGGGCC +
Preference number: 4 (lower is better)
Translates to: GEQCSGVASKRPVLAVRMTGKPM*TSMPGA
Trigger: GGCCCCCGGCATAGATGTGCACATCGGTTTTCCAGT...CATCCTCACAGCAAGGACCGGACGCTTGCTAGCCACCCCGGAGCACTGCTCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000413823.1
CDS-3UTR GCA 90 bp GGAGAGCAGTGCTCCGGGGTGGCTAGCAAGCGTCCGGTCCTTGCTGTGAGGATGCAAGCGTCCGGTCCTTaGTGTGAGGATGACGAAACG +
Preference number: 4 (lower is better)
Translates to: GEQCSGVASKRPVLAVRMQASGP*CEDDET
Trigger: CGTTTCGTCATCCTCACAGCAAGGACCGGACGCTTG...CATCCTCACAGCAAGGACCGGACGCTTGCTAGCCACCCCGGAGCACTGCTCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000413823.1
CDS-3UTR CCA 90 bp GGAGAGCAGTGCTCCGGGGTGGCTAGCAAGCGTCCGGTCCTTGCTGTGAGGATGCGTTGTAGGTCTGGCTaGTTGACAGGAGCTCTGGGT +
Preference number: 4 (lower is better)
Translates to: GEQCSGVASKRPVLAVRMRCRSG*LTGALG
Trigger: ACCCAGAGCTCCTGTCAACCAGCCAGACCTACAACG...CATCCTCACAGCAAGGACCGGACGCTTGCTAGCCACCCCGGAGCACTGCTCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
CDS-3UTR CCA 90 bp AGACACTCGCCAGGGCCAGGAAACAGCTGCAAACGACGTCAAGAACCCAAACCCCAGGTGCAGGAGGGATaGCTCCGGGAGGTTGGGAGG +
Preference number: 4 (lower is better)
Translates to: RHSPGPGNSCKRRQEPKPQVQEG*LREVGR
Trigger: CCTCCCAACCTCCCGGAGCCATCCCTCCTGCACCTG...GGGTTTGGGTTCTTGACGTCGTTTGCAGCTGTTTCCTGGCCCTGGCGAGTGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
CDS-3UTR CCA 90 bp AGGTTGAGGAAGAGACTCAGCCCCCGGGCAATGGGTGTGTCACTGCTCTCTCCGACAGCGAGTGGTAGCTaGCTTCGTGGTCCCCCAGGT +
Preference number: 4 (lower is better)
Translates to: RLRKRLSPRAMGVSLLSPTASGS*LRGPPG
Trigger: ACCTGGGGGACCACGAAGCCAGCTACCACTCGCTGT...CGGAGAGAGCAGTGACACACCCATTGCCCGGGGGCTGAGTCTCTTCCTCAACCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000423191.6
CDS-3UTR CCA 90 bp GGAGCAAGCAGGTCAGCGGGCGGAAGGTTCCTGCAGGTTCTTTGGGCTGGTGGTTGGCTGGGAGGTCCATaGCCTGATAGGAGTAGGCAG +
Preference number: 4 (lower is better)
Translates to: GASRSAGGRFLQVLWAGGWLGGP*PDRSRQ
Trigger: CTGCCTACTCCTATCAGGCCATGGACCTCCCAGCCA...ACCACCAGCCCAAAGAACCTGCAGGAACCTTCCGCCCGCTGACCTGCTTGCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
CDS-3UTR CCA 90 bp TGTCCAGACATAGGGTACCGTGCGCAGGGCGAGGACAGGGTCCACAGTTACCCTTGGCCCGACAGCAGGTaGCTGTCCTGTGCTAGCATG +
Preference number: 4 (lower is better)
Translates to: CPDIGYRAQGEDRVHSYPWPDSR*LSCASM
Trigger: CATGCTAGCACAGGACAGCCACCTGCTGTCGGGCCA...AGGGTAACTGTGGACCCTGTCCTCGCCCTGCGCACGGTACCCTATGTCTGGACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
CDS-3UTR CCA 90 bp AGGTTGAGGAAGAGACTCAGCCCCCGGGCAATGGGTGTGTCACTGCTCTCTCCGTGGCCCGACAGCAGGTaGCTGTCCTGTGCTAGCATG +
Preference number: 4 (lower is better)
Translates to: RLRKRLSPRAMGVSLLSPWPDSR*LSCASM
Trigger: CATGCTAGCACAGGACAGCCACCTGCTGTCGGGCCA...CGGAGAGAGCAGTGACACACCCATTGCCCGGGGGCTGAGTCTCTTCCTCAACCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000423191.6
CDS-3UTR CCA 90 bp TCCGGGGTGGCTAGCAAGCGTCCGGTCCTTGCTGTGAGGATGACGAAACGGTTTCCATCTCCTGGATCGTaGGCAGCTGGCCCGACAGCA +
Preference number: 4 (lower is better)
Translates to: SGVASKRPVLAVRMTKRFPSPGS*AAGPTA
Trigger: TGCTGTCGGGCCAGCTGCCCACGATCCAGGAGATGG...AAACCGTTTCGTCATCCTCACAGCAAGGACCGGACGCTTGCTAGCCACCCCGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
CDS-3UTR CCA 90 bp TTGAGGAAGAGACTCAGCCCCCGGGCAATGGGTGTGTCACTGCTCTCTCCGATGCCATCTCCTGGATCGTaGGCAGCTGGCCCGACAGCA +
Preference number: 4 (lower is better)
Translates to: LRKRLSPRAMGVSLLSPMPSPGS*AAGPTA
Trigger: TGCTGTCGGGCCAGCTGCCCACGATCCAGGAGATGG...CATCGGAGAGAGCAGTGACACACCCATTGCCCGGGGGCTGAGTCTCTTCCTCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000423191.6
CDS-3UTR CCA 90 bp GGAGCAAGCAGGTCAGCGGGCGGAAGGTTCCTGCAGGTTCTTTGGGCTGGTGGTGCAGCCACTTCCGAGTaGACCATCTCCTGGATCGTG +
Preference number: 4 (lower is better)
Translates to: GASRSAGGRFLQVLWAGGAATSE*TISWIV
Trigger: CACGATCCAGGAGATGGTCCACTCGGAAGTGGCTGC...ACCACCAGCCCAAAGAACCTGCAGGAACCTTCCGCCCGCTGACCTGCTTGCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
CDS-3UTR CCA 90 bp GACACTCGCCAGGGCCAGGAAACAGCTGCAAACGACGTCAAGAACCCAAACCCAGGGCACTCATGTGGCTaGCCAGCATTGCCGGGCGAC +
Preference number: 4 (lower is better)
Translates to: DTRQGQETAANDVKNPNPGHSCG*PALPGD
Trigger: GTCGCCCGGCAATGCTGGCCAGCCACATGAGTGCCC...TGGGTTTGGGTTCTTGACGTCGTTTGCAGCTGTTTCCTGGCCCTGGCGAGTGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
CDS-3UTR CCA 90 bp TTGAGGAAGAGACTCAGCCCCCGGGCAATGGGTGTGTCACTGCTCTCTCCGATGCTGAGGGCACTCATGTaGCTGGCCAGCATTGCCGGG +
Preference number: 4 (lower is better)
Translates to: LRKRLSPRAMGVSLLSPMLRALM*LASIAG
Trigger: CCCGGCAATGCTGGCCAGCCACATGAGTGCCCTCAG...CATCGGAGAGAGCAGTGACACACCCATTGCCCGGGGGCTGAGTCTCTTCCTCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000423191.6
CDS-3UTR CCA 90 bp TCAGCCCTTCAGGCTCTGAGCAGTGCCTTCCAGCGAGCCTCAGGGATGGTAGGGATCTGCGAGATGAGCTaGGACTGGCTGAGGGCACTC +
Preference number: 4 (lower is better)
Translates to: SALQALSSAFQRASGMVGICEMS*DWLRAL
Trigger: GAGTGCCCTCAGCCAGTCCCAGCTCATCTCGCAGAT...CCCTACCATCCCTGAGGCTCGCTGGAAGGCACTGCTCAGAGCCTGAAGGGCTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000423191.6
CDS-3UTR CCA 90 bp TTGAGGAAGAGACTCAGCCCCCGGGCAATGGGTGTGTCACTGCTCTCTCCGATGGGTGATGGGGAGCTGTaGGCGATGCTGCTCCGGATG +
Preference number: 4 (lower is better)
Translates to: LRKRLSPRAMGVSLLSPMGDGEL*AMLLRM
Trigger: CATCCGGAGCAGCATCGCCCACAGCTCCCCATCACC...CATCGGAGAGAGCAGTGACACACCCATTGCCCGGGGGCTGAGTCTCTTCCTCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000423191.6
CDS-3UTR CCA 90 bp CGGGGGCCGGCCCTCTGGCCCATGCATCTGGGGTGGGTGTCCGTTGGTAAGCGAGCTTCTGCGGCTCATTaGGGTCCTTCTTTTTCTTCT +
Preference number: 4 (lower is better)
Translates to: RGPALWPMHLGWVSVGKRASAAH*GPSFSS
Trigger: AGAAGAAAAAGAAGGACCCCAATGAGCCGCAGAAGC...TCGCTTACCAACGGACACCCACCCCAGATGCATGGGCCAGAGGGCCGGCCCCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000413823.1
CDS-3UTR CCA 90 bp CCCGGGCAATGGGTGTGTCACTGCTCTCTCCGATGGGCCACCCTGCCTCTGGCCGAGCATTTTGGCTGGTaGGTTTGCCTGAGTGCTCTT +
Preference number: 4 (lower is better)
Translates to: PGQWVCHCSLRWATLPLAEHFGW*VCLSAL
Trigger: AAGAGCACTCAGGCAAACCCACCAGCCAAAATGCTC...GGCCAGAGGCAGGGTGGCCCATCGGAGAGAGCAGTGACACACCCATTGCCCGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000423191.6
CDS-3UTR CCA 90 bp GGAGCAAGCAGGTCAGCGGGCGGAAGGTTCCTGCAGGTTCTTTGGGCTGGTGGTCATGGGCTGCTTGGGTaGGAGCATTTTGGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: GASRSAGGRFLQVLWAGGHGLLG*EHFGWW
Trigger: CCACCAGCCAAAATGCTCCCACCCAAGCAGCCCATG...ACCACCAGCCCAAAGAACCTGCAGGAACCTTCCGCCCGCTGACCTGCTTGCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
CDS-3UTR CCA 90 bp TCAGCCCTTCAGGCTCTGAGCAGTGCCTTCCAGCGAGCCTCAGGGATGGTAGGGCTGGCATGGCATACATaGGCTGCTTGGGTGGGAGCA +
Preference number: 4 (lower is better)
Translates to: SALQALSSAFQRASGMVGLAWHT*AAWVGA
Trigger: TGCTCCCACCCAAGCAGCCCATGTATGCCATGCCAG...CCCTACCATCCCTGAGGCTCGCTGGAAGGCACTGCTCAGAGCCTGAAGGGCTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000423191.6
CDS-3UTR CCA 90 bp CACTGGGCACCAAGACAGACACTCGCCAGGGCCAGGAAACAGCTGCAAACGACGAGGCCAGGCCTGGCATaGCATACATGGGCTGCTTGG +
Preference number: 4 (lower is better)
Translates to: HWAPRQTLARARKQLQTTRPGLA*HTWAAW
Trigger: CCAAGCAGCCCATGTATGCCATGCCAGGCCTGGCCT...CGTCGTTTGCAGCTGTTTCCTGGCCCTGGCGAGTGTCTGTCTTGGTGCCCAGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
CDS-3UTR CCA 90 bp GAGGTTGAGGAAGAGACTCAGCCCCCGGGCAATGGGTGTGTCACTGCTCTCTCCGAAGGAGGCCAGGCCTaGCATGGCATACATGGGCTG +
Preference number: 4 (lower is better)
Translates to: EVEEETQPPGNGCVTALSEGGQA*HGIHGL
Trigger: CAGCCCATGTATGCCATGCCAGGCCTGGCCTCCTTC...GGAGAGAGCAGTGACACACCCATTGCCCGGGGGCTGAGTCTCTTCCTCAACCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000423191.6
CDS-3UTR CCA 90 bp CTCGCCAGGGCCAGGAAACAGCTGCAAACGACGTCAAGAACCCAAACCCAAACGCTGGCAGCAGAGACTTaGAGCCCAGCGTCCGGGCGA +
Preference number: 4 (lower is better)
Translates to: LARARKQLQTTSRTQTQTLAAET*SPASGR
Trigger: TCGCCCGGACGCTGGGCTCCAAGTCTCTGCTGCCAG...CGTTTGGGTTTGGGTTCTTGACGTCGTTTGCAGCTGTTTCCTGGCCCTGGCGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
CDS-3UTR CCA 90 bp TTGAGGAAGAGACTCAGCCCCCGGGCAATGGGTGTGTCACTGCTCTCTCCGATGGGCAGTGACAGCTGCTaGTGCAGTGTGGGGCTGAGC +
Preference number: 4 (lower is better)
Translates to: LRKRLSPRAMGVSLLSPMGSDSC*CSVGLS
Trigger: GCTCAGCCCCACACTGCACCAGCAGCTGTCACTGCC...CATCGGAGAGAGCAGTGACACACCCATTGCCCGGGGGCTGAGTCTCTTCCTCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000423191.6
CDS-3UTR CCA 90 bp GAGGTTGAGGAAGAGACTCAGCCCCCGGGCAATGGGTGTGTCACTGCTCTCTCCGGACATGCTAACAGGTaGACTGAGGAGGGCGCCCTG +
Preference number: 4 (lower is better)
Translates to: EVEEETQPPGNGCVTALSGHANR*TEEGAL
Trigger: CAGGGCGCCCTCCTCAGTCCACCTGTTAGCATGTCC...GGAGAGAGCAGTGACACACCCATTGCCCGGGGGCTGAGTCTCTTCCTCAACCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000423191.6
CDS-3UTR CCA 90 bp TCCAGACATAGGGTACCGTGCGCAGGGCGAGGACAGGGTCCACAGTTACCCTGGAGGATCCCGAGCTGCTaGGGAACTCAGAGATGTGCG +
Preference number: 4 (lower is better)
Translates to: SRHRVPCAGRGQGPQLPWRIPSC*GTQRCA
Trigger: CGCACATCTCTGAGTTCCCCAGCAGCTCGGGATCCT...CCAGGGTAACTGTGGACCCTGTCCTCGCCCTGCGCACGGTACCCTATGTCTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
CDS-3UTR CCA 90 bp TCAGCCCTTCAGGCTCTGAGCAGTGCCTTCCAGCGAGCCTCAGGGATGGTAGGGAGGATCCCGAGCTGCTaGGGAACTCAGAGATGTGCG +
Preference number: 4 (lower is better)
Translates to: SALQALSSAFQRASGMVGRIPSC*GTQRCA
Trigger: CGCACATCTCTGAGTTCCCCAGCAGCTCGGGATCCT...CCCTACCATCCCTGAGGCTCGCTGGAAGGCACTGCTCAGAGCCTGAAGGGCTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000423191.6
CDS-3UTR CCA 90 bp GACACTCGCCAGGGCCAGGAAACAGCTGCAAACGACGTCAAGAACCCAAACCCACGCTGCTGGTGGGGTTaGATGGGCCAGGTGAGCAGG +
Preference number: 4 (lower is better)
Translates to: DTRQGQETAANDVKNPNPRCWWG*MGQVSR
Trigger: CCTGCTCACCTGGCCCATCCAACCCCACCAGCAGCG...TGGGTTTGGGTTCTTGACGTCGTTTGCAGCTGTTTCCTGGCCCTGGCGAGTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000413823.1
CDS-3UTR CCA 90 bp AAGCGTCCGGTCCTTGCTGTGAGGATGACGAAACGGTTTGGCAGCCGCTTTTGTCCCAGTCCCCGCTGCTaGTGGGGTTGGATGGGCCAG +
Preference number: 4 (lower is better)
Translates to: KRPVLAVRMTKRFGSRFCPSPRC*WGWMGQ
Trigger: CTGGCCCATCCAACCCCACCAGCAGCGGGGACTGGG...ACAAAAGCGGCTGCCAAACCGTTTCGTCATCCTCACAGCAAGGACCGGACGCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000413823.1
CDS-3UTR CCA 90 bp TTTGAGAGAAGCACTGGGCACCAAGACAGACACTCGCCAGGGCCAGGAAACAGCCACTGCTCTCTCCGATaGGCCACCCTGCCTCTGGCC +
Preference number: 4 (lower is better)
Translates to: FERSTGHQDRHSPGPGNSHCSLR*ATLPLA
Trigger: GGCCAGAGGCAGGGTGGCCCATCGGAGAGAGCAGTG...GCTGTTTCCTGGCCCTGGCGAGTGTCTGTCTTGGTGCCCAGTGCTTCTCTCAAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000413823.1
CDS-3UTR CCA 90 bp TTGAGGAAGAGACTCAGCCCCCGGGCAATGGGTGTGTCACTGCTCTCTCCGATGTCTTTGGGCTGGTGGTaGGCAGTGGGCTGCCTCTGC +
Preference number: 4 (lower is better)
Translates to: LRKRLSPRAMGVSLLSPMSLGWW*AVGCLC
Trigger: GCAGAGGCAGCCCACTGCCCACCACCAGCCCAAAGA...CATCGGAGAGAGCAGTGACACACCCATTGCCCGGGGGCTGAGTCTCTTCCTCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000423191.6
CDS-3UTR CCA 90 bp TCCGGGGTGGCTAGCAAGCGTCCGGTCCTTGCTGTGAGGATGACGAAACGGTTTGGTTCTTTGGGCTGGTaGTGGGCAGTGGGCTGCCTC +
Preference number: 4 (lower is better)
Translates to: SGVASKRPVLAVRMTKRFGSLGW*WAVGCL
Trigger: GAGGCAGCCCACTGCCCACCACCAGCCCAAAGAACC...AAACCGTTTCGTCATCCTCACAGCAAGGACCGGACGCTTGCTAGCCACCCCGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000413823.1
CDS-3UTR CCA 90 bp CTGGAGCAAGCAGGTCAGCGGGCGGAAGGTTCCTGCAGGTTCTTTGGGCTGGTGTTCCTGCAGGTTCTTTaGGCTGGTGGTGGGCAGTGG +
Preference number: 4 (lower is better)
Translates to: LEQAGQRAEGSCRFFGLVFLQVL*AGGGQW
Trigger: CCACTGCCCACCACCAGCCCAAAGAACCTGCAGGAA...CACCAGCCCAAAGAACCTGCAGGAACCTTCCGCCCGCTGACCTGCTTGCTCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
CDS-3UTR CCA 90 bp GGAGCAAGCAGGTCAGCGGGCGGAAGGTTCCTGCAGGTTCTTTGGGCTGGTGGTTCTGGCCCATGCATCTaGGGTGGGTGTCCGTTGGTA +
Preference number: 4 (lower is better)
Translates to: GASRSAGGRFLQVLWAGGSGPCI*GGCPLV
Trigger: TACCAACGGACACCCACCCCAGATGCATGGGCCAGA...ACCACCAGCCCAAAGAACCTGCAGGAACCTTCCGCCCGCTGACCTGCTTGCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
CDS-3UTR CCA 90 bp CAAGACAGACACTCGCCAGGGCCAGGAAACAGCTGCAAACGACGTCAAGAACCCAGCAGTGCTCCGGGGTaGCTAGCAAGCGTCCGGTCC +
Preference number: 4 (lower is better)
Translates to: QDRHSPGPGNSCKRRQEPSSAPG*LASVRS
Trigger: GGACCGGACGCTTGCTAGCCACCCCGGAGCACTGCT...GGGTTCTTGACGTCGTTTGCAGCTGTTTCCTGGCCCTGGCGAGTGTCTGTCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000413823.1
CDS-3UTR CCA 90 bp AGGTTGAGGAAGAGACTCAGCCCCCGGGCAATGGGTGTGTCACTGCTCTCTCCGCTCTTGGTCCTCTATTaGCTGGAGGCCCAGCACCCC +
Preference number: 4 (lower is better)
Translates to: RLRKRLSPRAMGVSLLSPLLVLY*LEAQHP
Trigger: GGGGTGCTGGGCCTCCAGCCAATAGAGGACCAAGAG...CGGAGAGAGCAGTGACACACCCATTGCCCGGGGGCTGAGTCTCTTCCTCAACCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358131.5
CDS-3UTR TCA 90 bp GAGGTTGAGGAAGAGACTCAGCCCCCGGGCAATGGGTGTGTCACTGCTCTCTCCGTAGGTCTGGCTGGTTaGCAGGAGCTCTGGGTTTCC +
Preference number: 4 (lower is better)
Translates to: EVEEETQPPGNGCVTALSVGLAG*QELWVS
Trigger: GGAAACCCAGAGCTCCTGTCAACCAGCCAGACCTAC...GGAGAGAGCAGTGACACACCCATTGCCCGGGGGCTGAGTCTCTTCCTCAACCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000423191.6
CDS-3UTR TCA 90 bp AGGTTGAGGAAGAGACTCAGCCCCCGGGCAATGGGTGTGTCACTGCTCTCTCCGGCATGTTGGACACCATaGTGGCTGGGAGGTCCATGG +
Preference number: 4 (lower is better)
Translates to: RLRKRLSPRAMGVSLLSPACWTP*WLGGPW
Trigger: CCATGGACCTCCCAGCCATCATGGTGTCCAACATGC...CGGAGAGAGCAGTGACACACCCATTGCCCGGGGGCTGAGTCTCTTCCTCAACCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000423191.6
CDS-3UTR TCA 90 bp GAGGTTGAGGAAGAGACTCAGCCCCCGGGCAATGGGTGTGTCACTGCTCTCTCCGCATGTTGGACACCATaGTGGCTGGGAGGTCCATGG +
Preference number: 4 (lower is better)
Translates to: EVEEETQPPGNGCVTALSACWTP*WLGGPW
Trigger: CCATGGACCTCCCAGCCATCATGGTGTCCAACATGC...GGAGAGAGCAGTGACACACCCATTGCCCGGGGGCTGAGTCTCTTCCTCAACCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000423191.6
CDS-3UTR TCA 90 bp TCCAGACATAGGGTACCGTGCGCAGGGCGAGGACAGGGTCCACAGTTACCCTGGCCCTTGATGGCGGCCTaGGTGTCTCTGAAGAAGAGT +
Preference number: 4 (lower is better)
Translates to: SRHRVPCAGRGQGPQLPWPLMAA*VSLKKS
Trigger: ACTCTTCTTCAGAGACACTCAGGCCGCCATCAAGGG...CCAGGGTAACTGTGGACCCTGTCCTCGCCCTGCGCACGGTACCCTATGTCTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
CDS-3UTR TCA 90 bp TTGAGGAAGAGACTCAGCCCCCGGGCAATGGGTGTGTCACTGCTCTCTCCGATGTGGGGTTCTGACCCTTaGTGGCGGCCTGAGTGTCTC +
Preference number: 4 (lower is better)
Translates to: LRKRLSPRAMGVSLLSPMWGSDP*WRPECL
Trigger: GAGACACTCAGGCCGCCATCAAGGGTCAGAACCCCA...CATCGGAGAGAGCAGTGACACACCCATTGCCCGGGGGCTGAGTCTCTTCCTCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000423191.6
CDS-3UTR TCA 90 bp TCAGCCCTTCAGGCTCTGAGCAGTGCCTTCCAGCGAGCCTCAGGGATGGTAGGGCTCTTGGTCTCACCTTaGTCTGGGGAGCTCTTGGAG +
Preference number: 4 (lower is better)
Translates to: SALQALSSAFQRASGMVGLLVSP*SGELLE
Trigger: CTCCAAGAGCTCCCCAGATCAAGGTGAGACCAAGAG...CCCTACCATCCCTGAGGCTCGCTGGAAGGCACTGCTCAGAGCCTGAAGGGCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341197.9
ENST00000372999.5
ENST00000423191.6
CDS-3UTR TCA 90 bp GACACTCGCCAGGGCCAGGAAACAGCTGCAAACGACGTCAAGAACCCAAACCCAGTTGGATGGGCCAGGTaGGCAGGATCCCGAGCTGCT +
Preference number: 4 (lower is better)
Translates to: DTRQGQETAANDVKNPNPVGWAR*AGSRAA
Trigger: AGCAGCTCGGGATCCTGCTCACCTGGCCCATCCAAC...TGGGTTTGGGTTCTTGACGTCGTTTGCAGCTGTTTCCTGGCCCTGGCGAGTGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000413823.1
CDS-3UTR TCA 90 bp AAGCGTCCGGTCCTTGCTGTGAGGATGACGAAACGGTTTGGCAGCCGCTTTTGTGCAGGCTGCAGGTGCTaGTGCCACACTCCCCACTGG +
Preference number: 4 (lower is better)
Translates to: KRPVLAVRMTKRFGSRFCAGCRC*CHTPHW
Trigger: CCAGTGGGGAGTGTGGCATCAGCACCTGCAGCCTGC...ACAAAAGCGGCTGCCAAACCGTTTCGTCATCCTCACAGCAAGGACCGGACGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000413823.1
CDS-3UTR TCA 90 bp GACAGACACTCGCCAGGGCCAGGAAACAGCTGCAAACGACGTCAAGAACCCAAAGCAGGCTGCAGGTGCTaGTGCCACACTCCCCACTGG +
Preference number: 4 (lower is better)
Translates to: DRHSPGPGNSCKRRQEPKAGCRC*CHTPHW
Trigger: CCAGTGGGGAGTGTGGCATCAGCACCTGCAGCCTGC...TTTGGGTTCTTGACGTCGTTTGCAGCTGTTTCCTGGCCCTGGCGAGTGTCTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000413823.1
CDS-3UTR TCA 90 bp CACTGGGCACCAAGACAGACACTCGCCAGGGCCAGGAAACAGCTGCAAACGACGGGAGGCGGGATTAGGTaGGGTAGAGCGATTTGTCCC +
Preference number: 4 (lower is better)
Translates to: HWAPRQTLARARKQLQTTGGGIR*GRAICP
Trigger: GGGACAAATCGCTCTACCTCACCTAATCCCGCCTCC...CGTCGTTTGCAGCTGTTTCCTGGCCCTGGCGAGTGTCTGTCTTGGTGCCCAGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000413823.1
CDS-3UTR TCA 90 bp AGGTTGAGGAAGAGACTCAGCCCCCGGGCAATGGGTGTGTCACTGCTCTCTCCGGGAGGCGGGATTAGGTaGGGTAGAGCGATTTGTCCC +
Preference number: 4 (lower is better)
Translates to: RLRKRLSPRAMGVSLLSPGGGIR*GRAICP
Trigger: GGGACAAATCGCTCTACCTCACCTAATCCCGCCTCC...CGGAGAGAGCAGTGACACACCCATTGCCCGGGGGCTGAGTCTCTTCCTCAACCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000423191.6
CDS-3UTR GCA 90 bp TCAGCCCTTCAGGCTCTGAGCAGTGCCTTCCAGCGAGCCTCAGGGATGGTAGGGAGCAGGATCCCGAGCTaGTGGGGAACTCAGAGATGT +
Preference number: 4 (lower is better)
Translates to: SALQALSSAFQRASGMVGSRIPS*WGTQRC
Trigger: ACATCTCTGAGTTCCCCAGCAGCTCGGGATCCTGCT...CCCTACCATCCCTGAGGCTCGCTGGAAGGCACTGCTCAGAGCCTGAAGGGCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000423191.6
CDS-3UTR GCA 90 bp CACTCGCCAGGGCCAGGAAACAGCTGCAAACGACGTCAAGAACCCAAACCCAAATGTCCCAGTCCCCGCTaGTGGTGGGGTTGGATGGGC +
Preference number: 4 (lower is better)
Translates to: HSPGPGNSCKRRQEPKPKCPSPR*WWGWMG
Trigger: GCCCATCCAACCCCACCAGCAGCGGGGACTGGGACA...TTTGGGTTTGGGTTCTTGACGTCGTTTGCAGCTGTTTCCTGGCCCTGGCGAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000413823.1
CDS-3UTR GCA 90 bp AAGCGTCCGGTCCTTGCTGTGAGGATGACGAAACGGTTTGGCAGCCGCTTTTGTTGTCCCAGTCCCCGCTaGTGGTGGGGTTGGATGGGC +
Preference number: 4 (lower is better)
Translates to: KRPVLAVRMTKRFGSRFCCPSPR*WWGWMG
Trigger: GCCCATCCAACCCCACCAGCAGCGGGGACTGGGACA...ACAAAAGCGGCTGCCAAACCGTTTCGTCATCCTCACAGCAAGGACCGGACGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000413823.1
CDS-3UTR GCA 90 bp GACAGACACTCGCCAGGGCCAGGAAACAGCTGCAAACGACGTCAAGAACCCAAATGTCCCAGTCCCCGCTaGTGGTGGGGTTGGATGGGC +
Preference number: 4 (lower is better)
Translates to: DRHSPGPGNSCKRRQEPKCPSPR*WWGWMG
Trigger: GCCCATCCAACCCCACCAGCAGCGGGGACTGGGACA...TTTGGGTTCTTGACGTCGTTTGCAGCTGTTTCCTGGCCCTGGCGAGTGTCTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000413823.1
CDS-3UTR GCA 90 bp CACAGTTACCCTGGAGCAAGCAGGTCAGCGGGCGGAAGGTTCCTGCAGGTTCTTTCAGGCTCTGAGCAGTaGCTTCCAGCGAGCCTCAGG +
Preference number: 4 (lower is better)
Translates to: HSYPGASRSAGGRFLQVLSGSEQ*LPASLR
Trigger: CCTGAGGCTCGCTGGAAGGCACTGCTCAGAGCCTGA...AAGAACCTGCAGGAACCTTCCGCCCGCTGACCTGCTTGCTCCAGGGTAACTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
CDS-3UTR GCA 90 bp CAAGACAGACACTCGCCAGGGCCAGGAAACAGCTGCAAACGACGTCAAGAACCCTGGTGGGCAGTGGGCTaGCTCTGCAGAGTCTGGTGG +
Preference number: 4 (lower is better)
Translates to: QDRHSPGPGNSCKRRQEPWWAVG*LCRVWW
Trigger: CCACCAGACTCTGCAGAGGCAGCCCACTGCCCACCA...GGGTTCTTGACGTCGTTTGCAGCTGTTTCCTGGCCCTGGCGAGTGTCTGTCTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000413823.1
CDS-3UTR GCA 90 bp TCCGGGGTGGCTAGCAAGCGTCCGGTCCTTGCTGTGAGGATGACGAAACGGTTTAGACATAGGGTACCGTaGGCAGGGCGAGGACAGGGT +
Preference number: 4 (lower is better)
Translates to: SGVASKRPVLAVRMTKRFRHRVP*AGRGQG
Trigger: ACCCTGTCCTCGCCCTGCGCACGGTACCCTATGTCT...AAACCGTTTCGTCATCCTCACAGCAAGGACCGGACGCTTGCTAGCCACCCCGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000413823.1
CDS-3UTR GCA 90 bp GACAGACACTCGCCAGGGCCAGGAAACAGCTGCAAACGACGTCAAGAACCCAAACGATGTGCACATCTATaGCGGGGGCCGGCCCTCTGG +
Preference number: 4 (lower is better)
Translates to: DRHSPGPGNSCKRRQEPKRCAHL*RGPALW
Trigger: CCAGAGGGCCGGCCCCCGGCATAGATGTGCACATCG...TTTGGGTTCTTGACGTCGTTTGCAGCTGTTTCCTGGCCCTGGCGAGTGTCTGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000413823.1
CDS-3UTR GCA 90 bp GGTCCACAGTTACCCTGGAGCAAGCAGGTCAGCGGGCGGAAGGTTCCTGCAGGTACTGGAAAACCGATGTaGACATCTATGCCGGGGGCC +
Preference number: 4 (lower is better)
Translates to: GPQLPWSKQVSGRKVPAGTGKPM*TSMPGA
Trigger: GGCCCCCGGCATAGATGTGCACATCGGTTTTCCAGT...ACCTGCAGGAACCTTCCGCCCGCTGACCTGCTTGCTCCAGGGTAACTGTGGACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
CDS-3UTR GCA 90 bp CGGGGGCCGGCCCTCTGGCCCATGCATCTGGGGTGGGTGTCCGTTGGTAAGCGAGAAACACACCTGCAATaGACCAGTGTCTTGCAAGTA +
Preference number: 4 (lower is better)
Translates to: RGPALWPMHLGWVSVGKRETHLQ*TSVLQV
Trigger: TACTTGCAAGACACTGGTGCATTGCAGGTGTGTTTC...TCGCTTACCAACGGACACCCACCCCAGATGCATGGGCCAGAGGGCCGGCCCCCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000358131.5
CDS-3UTR CCA 90 bp GAGGTTGAGGAAGAGACTCAGCCCCCGGGCAATGGGTGTGTCACTGCTCTCTCCTGGCTGGGAGGTCCATaGCCTGATAGGAGTAGGCAG +
Preference number: 4 (lower is better)
Translates to: EVEEETQPPGNGCVTALSWLGGP*PDRSRQ
Trigger: CTGCCTACTCCTATCAGGCCATGGACCTCCCAGCCA...GGAGAGAGCAGTGACACACCCATTGCCCGGGGGCTGAGTCTCTTCCTCAACCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000423191.6
CDS-3UTR CCA 90 bp TGCTGTGAGGATGACGAAACGGTTTGGCAGCCGCTTTTGTGCGCGTCTCCCTTATGGATCGTGGGCAGCTaGCCCGACAGCAGGTGGCTG +
Preference number: 4 (lower is better)
Translates to: CCEDDETVWQPLLCASPLWIVGS*PDSRWL
Trigger: CAGCCACCTGCTGTCGGGCCAGCTGCCCACGATCCA...TAAGGGAGACGCGCACAAAAGCGGCTGCCAAACCGTTTCGTCATCCTCACAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
CDS-3UTR CCA 90 bp GAGGTTGAGGAAGAGACTCAGCCCCCGGGCAATGGGTGTGTCACTGCTCTCTCCATCTGCGAGATGAGCTaGGACTGGCTGAGGGCACTC +
Preference number: 4 (lower is better)
Translates to: EVEEETQPPGNGCVTALSICEMS*DWLRAL
Trigger: GAGTGCCCTCAGCCAGTCCCAGCTCATCTCGCAGAT...GGAGAGAGCAGTGACACACCCATTGCCCGGGGGCTGAGTCTCTTCCTCAACCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000423191.6
CDS-3UTR CCA 90 bp TCAGCCCTTCAGGCTCTGAGCAGTGCCTTCCAGCGAGCCTCAGGGATGGTAGGGACACGTCACCGAAAGTaGCACTGGGGTTCTGACCCT +
Preference number: 4 (lower is better)
Translates to: SALQALSSAFQRASGMVGTRHRK*HWGSDP
Trigger: AGGGTCAGAACCCCAGTGCCACTTTCGGTGACGTGT...CCCTACCATCCCTGAGGCTCGCTGGAAGGCACTGCTCAGAGCCTGAAGGGCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000423191.6
CDS-3UTR CCA 90 bp TCCAGACATAGGGTACCGTGCGCAGGGCGAGGACAGGGTCCACAGTTACCCTGGTGGGTGGGAGCATTTTaGCTGGTGGGTTTGCCTGAG +
Preference number: 4 (lower is better)
Translates to: SRHRVPCAGRGQGPQLPWWVGAF*LVGLPE
Trigger: CTCAGGCAAACCCACCAGCCAAAATGCTCCCACCCA...CCAGGGTAACTGTGGACCCTGTCCTCGCCCTGCGCACGGTACCCTATGTCTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
CDS-3UTR CCA 90 bp GAGGTTGAGGAAGAGACTCAGCCCCCGGGCAATGGGTGTGTCACTGCTCTCTCCCATGGGCTGCTTGGGTaGGAGCATTTTGGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: EVEEETQPPGNGCVTALSHGLLG*EHFGWW
Trigger: CCACCAGCCAAAATGCTCCCACCCAAGCAGCCCATG...GGAGAGAGCAGTGACACACCCATTGCCCGGGGGCTGAGTCTCTTCCTCAACCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000423191.6
CDS-3UTR CCA 90 bp CCTTCAGGCTCTGAGCAGTGCCTTCCAGCGAGCCTCAGGGATGGTAGGGAGGCGCATACATGGGCTGCTTaGGTGGGAGCATTTTGGCTG +
Preference number: 4 (lower is better)
Translates to: PSGSEQCLPASLRDGREAHTWAA*VGAFWL
Trigger: CAGCCAAAATGCTCCCACCCAAGCAGCCCATGTATG...CGCCTCCCTACCATCCCTGAGGCTCGCTGGAAGGCACTGCTCAGAGCCTGAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000423191.6
CDS-3UTR CCA 90 bp GACACTCGCCAGGGCCAGGAAACAGCTGCAAACGACGTCAAGAACCCAAACCCAGGCAGTGACAGCTGCTaGTGCAGTGTGGGGCTGAGC +
Preference number: 4 (lower is better)
Translates to: DTRQGQETAANDVKNPNPGSDSC*CSVGLS
Trigger: GCTCAGCCCCACACTGCACCAGCAGCTGTCACTGCC...TGGGTTTGGGTTCTTGACGTCGTTTGCAGCTGTTTCCTGGCCCTGGCGAGTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
CDS-3UTR CCA 90 bp GACAGACACTCGCCAGGGCCAGGAAACAGCTGCAAACGACGTCAAGAACCCAAACGCTGCTGGTGGGGTTaGATGGGCCAGGTGAGCAGG +
Preference number: 4 (lower is better)
Translates to: DRHSPGPGNSCKRRQEPKRCWWG*MGQVSR
Trigger: CCTGCTCACCTGGCCCATCCAACCCCACCAGCAGCG...TTTGGGTTCTTGACGTCGTTTGCAGCTGTTTCCTGGCCCTGGCGAGTGTCTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000413823.1
CDS-3UTR CCA 90 bp AAGCGTCCGGTCCTTGCTGTGAGGATGACGAAACGGTTTGGCAGCCGCTTTTGTCGCTGCTGGTGGGGTTaGATGGGCCAGGTGAGCAGG +
Preference number: 4 (lower is better)
Translates to: KRPVLAVRMTKRFGSRFCRCWWG*MGQVSR
Trigger: CCTGCTCACCTGGCCCATCCAACCCCACCAGCAGCG...ACAAAAGCGGCTGCCAAACCGTTTCGTCATCCTCACAGCAAGGACCGGACGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000413823.1
CDS-3UTR CCA 90 bp TTGAGGAAGAGACTCAGCCCCCGGGCAATGGGTGTGTCACTGCTCTCTCCGATGTCAGCCCCCGGGCAATaGGTGTGTCACTGCTCTCTC +
Preference number: 4 (lower is better)
Translates to: LRKRLSPRAMGVSLLSPMSAPGQ*VCHCSL
Trigger: GAGAGAGCAGTGACACACCCATTGCCCGGGGGCTGA...CATCGGAGAGAGCAGTGACACACCCATTGCCCGGGGGCTGAGTCTCTTCCTCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000423191.6
CDS-3UTR CCA 90 bp GGAGAGCAGTGCTCCGGGGTGGCTAGCAAGCGTCCGGTCCTTGCTGTGAGGATGCTCTGCAGAGTCTGGTaGGAGGTTGAGGAAGAGACT +
Preference number: 4 (lower is better)
Translates to: GEQCSGVASKRPVLAVRMLCRVW*EVEEET
Trigger: AGTCTCTTCCTCAACCTCCCACCAGACTCTGCAGAG...CATCCTCACAGCAAGGACCGGACGCTTGCTAGCCACCCCGGAGCACTGCTCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000413823.1
CDS-3UTR CCA 90 bp CCTTCAGGCTCTGAGCAGTGCCTTCCAGCGAGCCTCAGGGATGGTAGGGAGGCGCTCTGCAGAGTCTGGTaGGAGGTTGAGGAAGAGACT +
Preference number: 4 (lower is better)
Translates to: PSGSEQCLPASLRDGREALCRVW*EVEEET
Trigger: AGTCTCTTCCTCAACCTCCCACCAGACTCTGCAGAG...CGCCTCCCTACCATCCCTGAGGCTCGCTGGAAGGCACTGCTCAGAGCCTGAAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000423191.6
CDS-3UTR CCA 90 bp CAGTGCTCCGGGGTGGCTAGCAAGCGTCCGGTCCTTGCTGTGAGGATGACGAAATTCCTGCAGGTTCTTTaGGCTGGTGGTGGGCAGTGG +
Preference number: 4 (lower is better)
Translates to: QCSGVASKRPVLAVRMTKFLQVL*AGGGQW
Trigger: CCACTGCCCACCACCAGCCCAAAGAACCTGCAGGAA...TTTCGTCATCCTCACAGCAAGGACCGGACGCTTGCTAGCCACCCCGGAGCACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000413823.1
CDS-3UTR CCA 90 bp CAGTGCTCCGGGGTGGCTAGCAAGCGTCCGGTCCTTGCTGTGAGGATGACGAAACCCATGCATCTGGGGTaGGTGTCCGTTGGTAAGCGA +
Preference number: 4 (lower is better)
Translates to: QCSGVASKRPVLAVRMTKPMHLG*VSVGKR
Trigger: TCGCTTACCAACGGACACCCACCCCAGATGCATGGG...TTTCGTCATCCTCACAGCAAGGACCGGACGCTTGCTAGCCACCCCGGAGCACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000413823.1
CDS-3UTR CCA 90 bp GAGGTTGAGGAAGAGACTCAGCCCCCGGGCAATGGGTGTGTCACTGCTCTCTCCTCTGGCCCATGCATCTaGGGTGGGTGTCCGTTGGTA +
Preference number: 4 (lower is better)
Translates to: EVEEETQPPGNGCVTALSSGPCI*GGCPLV
Trigger: TACCAACGGACACCCACCCCAGATGCATGGGCCAGA...GGAGAGAGCAGTGACACACCCATTGCCCGGGGGCTGAGTCTCTTCCTCAACCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
CDS-3UTR CCA 90 bp CGAGGACAGGGTCCACAGTTACCCTGGAGCAAGCAGGTCAGCGGGCGGAAGGTTGATGACGAAACGGTTTaGCAGCCGCTTTTGTGCGCG +
Preference number: 4 (lower is better)
Translates to: RGQGPQLPWSKQVSGRKVDDETV*QPLLCA
Trigger: CGCGCACAAAAGCGGCTGCCAAACCGTTTCGTCATC...AACCTTCCGCCCGCTGACCTGCTTGCTCCAGGGTAACTGTGGACCCTGTCCTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
CDS-3UTR TCA 90 bp TCCGGGGTGGCTAGCAAGCGTCCGGTCCTTGCTGTGAGGATGACGAAACGGTTTGCATGTTGGACACCATaGTGGCTGGGAGGTCCATGG +
Preference number: 4 (lower is better)
Translates to: SGVASKRPVLAVRMTKRFACWTP*WLGGPW
Trigger: CCATGGACCTCCCAGCCATCATGGTGTCCAACATGC...AAACCGTTTCGTCATCCTCACAGCAAGGACCGGACGCTTGCTAGCCACCCCGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
CDS-3UTR TCA 90 bp GGAGCAAGCAGGTCAGCGGGCGGAAGGTTCCTGCAGGTTCTTTGGGCTGGTGGTTTTTCCTGGGTCGGCTaGAGGTCTCTTTTCTCCCGA +
Preference number: 4 (lower is better)
Translates to: GASRSAGGRFLQVLWAGGFSWVG*RSLFSR
Trigger: TCGGGAGAAAAGAGACCTTCAGCCGACCCAGGAAAA...ACCACCAGCCCAAAGAACCTGCAGGAACCTTCCGCCCGCTGACCTGCTTGCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
CDS-3UTR TCA 90 bp TCCAGACATAGGGTACCGTGCGCAGGGCGAGGACAGGGTCCACAGTTACCCTGGTTTTCCTGGGTCGGCTaGAGGTCTCTTTTCTCCCGA +
Preference number: 4 (lower is better)
Translates to: SRHRVPCAGRGQGPQLPWFSWVG*RSLFSR
Trigger: TCGGGAGAAAAGAGACCTTCAGCCGACCCAGGAAAA...CCAGGGTAACTGTGGACCCTGTCCTCGCCCTGCGCACGGTACCCTATGTCTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
CDS-3UTR TCA 90 bp TCAGCCCTTCAGGCTCTGAGCAGTGCCTTCCAGCGAGCCTCAGGGATGGTAGGGTTTTCCTGGGTCGGCTaGAGGTCTCTTTTCTCCCGA +
Preference number: 4 (lower is better)
Translates to: SALQALSSAFQRASGMVGFSWVG*RSLFSR
Trigger: TCGGGAGAAAAGAGACCTTCAGCCGACCCAGGAAAA...CCCTACCATCCCTGAGGCTCGCTGGAAGGCACTGCTCAGAGCCTGAAGGGCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000423191.6
CDS-3UTR TCA 90 bp CACTCGCCAGGGCCAGGAAACAGCTGCAAACGACGTCAAGAACCCAAACCCAAAGTTGGATGGGCCAGGTaGGCAGGATCCCGAGCTGCT +
Preference number: 4 (lower is better)
Translates to: HSPGPGNSCKRRQEPKPKVGWAR*AGSRAA
Trigger: AGCAGCTCGGGATCCTGCTCACCTGGCCCATCCAAC...TTTGGGTTTGGGTTCTTGACGTCGTTTGCAGCTGTTTCCTGGCCCTGGCGAGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000413823.1
CDS-3UTR GCA 90 bp CAAGACAGACACTCGCCAGGGCCAGGAAACAGCTGCAAACGACGTCAAGAACCCCTCCGGATGCCCATCTaGGAGATGAGCTGGGACTGG +
Preference number: 4 (lower is better)
Translates to: QDRHSPGPGNSCKRRQEPLRMPI*EMSWDW
Trigger: CCAGTCCCAGCTCATCTCGCAGATGGGCATCCGGAG...GGGTTCTTGACGTCGTTTGCAGCTGTTTCCTGGCCCTGGCGAGTGTCTGTCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
CDS-3UTR GCA 90 bp AAGCGTCCGGTCCTTGCTGTGAGGATGACGAAACGGTTTGGCAGCCGCTTTTGTAGCTGTGGGCGATGCTaGTCCGGATGCCCATCTGCG +
Preference number: 4 (lower is better)
Translates to: KRPVLAVRMTKRFGSRFCSCGRC*SGCPSA
Trigger: CGCAGATGGGCATCCGGAGCAGCATCGCCCACAGCT...ACAAAAGCGGCTGCCAAACCGTTTCGTCATCCTCACAGCAAGGACCGGACGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
CDS-3UTR GCA 90 bp TTGAGGAAGAGACTCAGCCCCCGGGCAATGGGTGTGTCACTGCTCTCTCCGATGGGGAACTCAGAGATGTaGGGGAAGTCCTGTGGCCCT +
Preference number: 4 (lower is better)
Translates to: LRKRLSPRAMGVSLLSPMGNSEM*GKSCGP
Trigger: AGGGCCACAGGACTTCCCGCACATCTCTGAGTTCCC...CATCGGAGAGAGCAGTGACACACCCATTGCCCGGGGGCTGAGTCTCTTCCTCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000423191.6
CDS-3UTR GCA 90 bp TCCGGGGTGGCTAGCAAGCGTCCGGTCCTTGCTGTGAGGATGACGAAACGGTTTCAATGGGTGTGTCACTaGTCTCTCCGATGGGCCACC +
Preference number: 4 (lower is better)
Translates to: SGVASKRPVLAVRMTKRFQWVCH*SLRWAT
Trigger: GGTGGCCCATCGGAGAGAGCAGTGACACACCCATTG...AAACCGTTTCGTCATCCTCACAGCAAGGACCGGACGCTTGCTAGCCACCCCGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000413823.1
CDS-3UTR GCA 90 bp AAGCGTCCGGTCCTTGCTGTGAGGATGACGAAACGGTTTGGCAGCCGCTTTTGTTGGTGGGCAGTGGGCTaGCTCTGCAGAGTCTGGTGG +
Preference number: 4 (lower is better)
Translates to: KRPVLAVRMTKRFGSRFCWWAVG*LCRVWW
Trigger: CCACCAGACTCTGCAGAGGCAGCCCACTGCCCACCA...ACAAAAGCGGCTGCCAAACCGTTTCGTCATCCTCACAGCAAGGACCGGACGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000413823.1
CDS-3UTR GCA 90 bp CTCGCCAGGGCCAGGAAACAGCTGCAAACGACGTCAAGAACCCAAACCCAAACGCGGGCGGAAGGTTCCTaGAGGTTCTTTGGGCTGGTG +
Preference number: 4 (lower is better)
Translates to: LARARKQLQTTSRTQTQTRAEGS*RFFGLV
Trigger: CACCAGCCCAAAGAACCTGCAGGAACCTTCCGCCCG...CGTTTGGGTTTGGGTTCTTGACGTCGTTTGCAGCTGTTTCCTGGCCCTGGCGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000413823.1
CDS-3UTR GCA 90 bp GACACTCGCCAGGGCCAGGAAACAGCTGCAAACGACGTCAAGAACCCAAACCCACGGGCGGAAGGTTCCTaGAGGTTCTTTGGGCTGGTG +
Preference number: 4 (lower is better)
Translates to: DTRQGQETAANDVKNPNPRAEGS*RFFGLV
Trigger: CACCAGCCCAAAGAACCTGCAGGAACCTTCCGCCCG...TGGGTTTGGGTTCTTGACGTCGTTTGCAGCTGTTTCCTGGCCCTGGCGAGTGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000413823.1
CDS-3UTR GCA 90 bp CAAGACAGACACTCGCCAGGGCCAGGAAACAGCTGCAAACGACGTCAAGAACCCAGACATAGGGTACCGTaGGCAGGGCGAGGACAGGGT +
Preference number: 4 (lower is better)
Translates to: QDRHSPGPGNSCKRRQEPRHRVP*AGRGQG
Trigger: ACCCTGTCCTCGCCCTGCGCACGGTACCCTATGTCT...GGGTTCTTGACGTCGTTTGCAGCTGTTTCCTGGCCCTGGCGAGTGTCTGTCTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000413823.1
CDS-3UTR GCA 90 bp CACTGGGCACCAAGACAGACACTCGCCAGGGCCAGGAAACAGCTGCAAACGACGACTGGAAAACCGATGTaGACATCTATGCCGGGGGCC +
Preference number: 4 (lower is better)
Translates to: HWAPRQTLARARKQLQTTTGKPM*TSMPGA
Trigger: GGCCCCCGGCATAGATGTGCACATCGGTTTTCCAGT...CGTCGTTTGCAGCTGTTTCCTGGCCCTGGCGAGTGTCTGTCTTGGTGCCCAGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000413823.1
CDS-3UTR GCA 90 bp CAGTGCTCCGGGGTGGCTAGCAAGCGTCCGGTCCTTGCTGTGAGGATGACGAAACAAGCGTCCGGTCCTTaGTGTGAGGATGACGAAACG +
Preference number: 4 (lower is better)
Translates to: QCSGVASKRPVLAVRMTKQASGP*CEDDET
Trigger: CGTTTCGTCATCCTCACAGCAAGGACCGGACGCTTG...TTTCGTCATCCTCACAGCAAGGACCGGACGCTTGCTAGCCACCCCGGAGCACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000413823.1
CDS-3UTR GCA 90 bp CACTGGGCACCAAGACAGACACTCGCCAGGGCCAGGAAACAGCTGCAAACGACGCAAGCGTCCGGTCCTTaGTGTGAGGATGACGAAACG +
Preference number: 4 (lower is better)
Translates to: HWAPRQTLARARKQLQTTQASGP*CEDDET
Trigger: CGTTTCGTCATCCTCACAGCAAGGACCGGACGCTTG...CGTCGTTTGCAGCTGTTTCCTGGCCCTGGCGAGTGTCTGTCTTGGTGCCCAGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000413823.1
CDS-3UTR CCA 90 bp GAGGTTGAGGAAGAGACTCAGCCCCCGGGCAATGGGTGTGTCACTGCTCTCTCCCGTTGTAGGTCTGGCTaGTTGACAGGAGCTCTGGGT +
Preference number: 4 (lower is better)
Translates to: EVEEETQPPGNGCVTALSRCRSG*LTGALG
Trigger: ACCCAGAGCTCCTGTCAACCAGCCAGACCTACAACG...GGAGAGAGCAGTGACACACCCATTGCCCGGGGGCTGAGTCTCTTCCTCAACCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000423191.6
CDS-3UTR CCA 90 bp GAGGTTGAGGAAGAGACTCAGCCCCCGGGCAATGGGTGTGTCACTGCTCTCTCCGGACACCATGATGGCTaGGAGGTCCATGGCCTGATA +
Preference number: 4 (lower is better)
Translates to: EVEEETQPPGNGCVTALSGHHDG*EVHGLI
Trigger: TATCAGGCCATGGACCTCCCAGCCATCATGGTGTCC...GGAGAGAGCAGTGACACACCCATTGCCCGGGGGCTGAGTCTCTTCCTCAACCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000423191.6
CDS-3UTR CCA 90 bp TTGAGGAAGAGACTCAGCCCCCGGGCAATGGGTGTGTCACTGCTCTCTCCGATGGCAGCCACTTCCGAGTaGACCATCTCCTGGATCGTG +
Preference number: 4 (lower is better)
Translates to: LRKRLSPRAMGVSLLSPMAATSE*TISWIV
Trigger: CACGATCCAGGAGATGGTCCACTCGGAAGTGGCTGC...CATCGGAGAGAGCAGTGACACACCCATTGCCCGGGGGCTGAGTCTCTTCCTCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000423191.6
CDS-3UTR CCA 90 bp CACAGTTACCCTGGAGCAAGCAGGTCAGCGGGCGGAAGGTTCCTGCAGGTTCTTGCAGCCACTTCCGAGTaGACCATCTCCTGGATCGTG +
Preference number: 4 (lower is better)
Translates to: HSYPGASRSAGGRFLQVLAATSE*TISWIV
Trigger: CACGATCCAGGAGATGGTCCACTCGGAAGTGGCTGC...AAGAACCTGCAGGAACCTTCCGCCCGCTGACCTGCTTGCTCCAGGGTAACTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
CDS-3UTR CCA 90 bp TGCTGTGAGGATGACGAAACGGTTTGGCAGCCGCTTTTGTGCGCGTCTCCCTTACTGAGGGCACTCATGTaGCTGGCCAGCATTGCCGGG +
Preference number: 4 (lower is better)
Translates to: CCEDDETVWQPLLCASPLLRALM*LASIAG
Trigger: CCCGGCAATGCTGGCCAGCCACATGAGTGCCCTCAG...TAAGGGAGACGCGCACAAAAGCGGCTGCCAAACCGTTTCGTCATCCTCACAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
CDS-3UTR CCA 90 bp TTGAGGAAGAGACTCAGCCCCCGGGCAATGGGTGTGTCACTGCTCTCTCCGATGATCTGCGAGATGAGCTaGGACTGGCTGAGGGCACTC +
Preference number: 4 (lower is better)
Translates to: LRKRLSPRAMGVSLLSPMICEMS*DWLRAL
Trigger: GAGTGCCCTCAGCCAGTCCCAGCTCATCTCGCAGAT...CATCGGAGAGAGCAGTGACACACCCATTGCCCGGGGGCTGAGTCTCTTCCTCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000423191.6
CDS-3UTR CCA 90 bp GACAGACACTCGCCAGGGCCAGGAAACAGCTGCAAACGACGTCAAGAACCCAAAGGTGATGGGGAGCTGTaGGCGATGCTGCTCCGGATG +
Preference number: 4 (lower is better)
Translates to: DRHSPGPGNSCKRRQEPKGDGEL*AMLLRM
Trigger: CATCCGGAGCAGCATCGCCCACAGCTCCCCATCACC...TTTGGGTTCTTGACGTCGTTTGCAGCTGTTTCCTGGCCCTGGCGAGTGTCTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
CDS-3UTR CCA 90 bp AGGTTGAGGAAGAGACTCAGCCCCCGGGCAATGGGTGTGTCACTGCTCTCTCCGGGTCTCACCTTGATCTaGGGAGCTCTTGGAGACGAG +
Preference number: 4 (lower is better)
Translates to: RLRKRLSPRAMGVSLLSPGLTLI*GALGDE
Trigger: CTCGTCTCCAAGAGCTCCCCAGATCAAGGTGAGACC...CGGAGAGAGCAGTGACACACCCATTGCCCGGGGGCTGAGTCTCTTCCTCAACCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000341197.9
ENST00000372999.5
ENST00000423191.6
CDS-3UTR CCA 90 bp CGAGGACAGGGTCCACAGTTACCCTGGAGCAAGCAGGTCAGCGGGCGGAAGGTTTTGCCTGAGTGCTCTTaGTCTCACCTTGATCTGGGG +
Preference number: 4 (lower is better)
Translates to: RGQGPQLPWSKQVSGRKVLPECS*SHLDLG
Trigger: CCCCAGATCAAGGTGAGACCAAGAGCACTCAGGCAA...AACCTTCCGCCCGCTGACCTGCTTGCTCCAGGGTAACTGTGGACCCTGTCCTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
CDS-3UTR CCA 90 bp TCAGCCCTTCAGGCTCTGAGCAGTGCCTTCCAGCGAGCCTCAGGGATGGTAGGGTGGGAGCATTTTGGCTaGTGGGTTTGCCTGAGTGCT +
Preference number: 4 (lower is better)
Translates to: SALQALSSAFQRASGMVGWEHFG*WVCLSA
Trigger: AGCACTCAGGCAAACCCACCAGCCAAAATGCTCCCA...CCCTACCATCCCTGAGGCTCGCTGGAAGGCACTGCTCAGAGCCTGAAGGGCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000423191.6
CDS-3UTR CCA 90 bp GAGGTTGAGGAAGAGACTCAGCCCCCGGGCAATGGGTGTGTCACTGCTCTCTCCTGGGTGGGAGCATTTTaGCTGGTGGGTTTGCCTGAG +
Preference number: 4 (lower is better)
Translates to: EVEEETQPPGNGCVTALSWVGAF*LVGLPE
Trigger: CTCAGGCAAACCCACCAGCCAAAATGCTCCCACCCA...GGAGAGAGCAGTGACACACCCATTGCCCGGGGGCTGAGTCTCTTCCTCAACCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000423191.6
CDS-3UTR CCA 90 bp CACAGTTACCCTGGAGCAAGCAGGTCAGCGGGCGGAAGGTTCCTGCAGGTTCTTCATGGGCTGCTTGGGTaGGAGCATTTTGGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: HSYPGASRSAGGRFLQVLHGLLG*EHFGWW
Trigger: CCACCAGCCAAAATGCTCCCACCCAAGCAGCCCATG...AAGAACCTGCAGGAACCTTCCGCCCGCTGACCTGCTTGCTCCAGGGTAACTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
CDS-3UTR CCA 90 bp TCCAGACATAGGGTACCGTGCGCAGGGCGAGGACAGGGTCCACAGTTACCCTGGCATACATGGGCTGCTTaGGTGGGAGCATTTTGGCTG +
Preference number: 4 (lower is better)
Translates to: SRHRVPCAGRGQGPQLPWHTWAA*VGAFWL
Trigger: CAGCCAAAATGCTCCCACCCAAGCAGCCCATGTATG...CCAGGGTAACTGTGGACCCTGTCCTCGCCCTGCGCACGGTACCCTATGTCTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
CDS-3UTR CCA 90 bp CTGGAGCAAGCAGGTCAGCGGGCGGAAGGTTCCTGCAGGTTCTTTGGGCTGGTGCATACATGGGCTGCTTaGGTGGGAGCATTTTGGCTG +
Preference number: 4 (lower is better)
Translates to: LEQAGQRAEGSCRFFGLVHTWAA*VGAFWL
Trigger: CAGCCAAAATGCTCCCACCCAAGCAGCCCATGTATG...CACCAGCCCAAAGAACCTGCAGGAACCTTCCGCCCGCTGACCTGCTTGCTCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
CDS-3UTR CCA 90 bp CACAGTTACCCTGGAGCAAGCAGGTCAGCGGGCGGAAGGTTCCTGCAGGTTCTTCTGGCATGGCATACATaGGCTGCTTGGGTGGGAGCA +
Preference number: 4 (lower is better)
Translates to: HSYPGASRSAGGRFLQVLLAWHT*AAWVGA
Trigger: TGCTCCCACCCAAGCAGCCCATGTATGCCATGCCAG...AAGAACCTGCAGGAACCTTCCGCCCGCTGACCTGCTTGCTCCAGGGTAACTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
CDS-3UTR CCA 90 bp TTTGAGAGAAGCACTGGGCACCAAGACAGACACTCGCCAGGGCCAGGAAACAGCGAAGGAGGCCAGGCCTaGCATGGCATACATGGGCTG +
Preference number: 4 (lower is better)
Translates to: FERSTGHQDRHSPGPGNSEGGQA*HGIHGL
Trigger: CAGCCCATGTATGCCATGCCAGGCCTGGCCTCCTTC...GCTGTTTCCTGGCCCTGGCGAGTGTCTGTCTTGGTGCCCAGTGCTTCTCTCAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
CDS-3UTR CCA 90 bp CAGGGCCAGGAAACAGCTGCAAACGACGTCAAGAACCCAAACCCAAACGAAACCAGTCCCCGCTGCTGGTaGGGTTGGATGGGCCAGGTG +
Preference number: 4 (lower is better)
Translates to: QGQETAANDVKNPNPNETSPRCW*GWMGQV
Trigger: CACCTGGCCCATCCAACCCCACCAGCAGCGGGGACT...GGTTTCGTTTGGGTTTGGGTTCTTGACGTCGTTTGCAGCTGTTTCCTGGCCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000413823.1
CDS-3UTR CCA 90 bp TCAGCCCTTCAGGCTCTGAGCAGTGCCTTCCAGCGAGCCTCAGGGATGGTAGGGCTCTGCAGAGTCTGGTaGGAGGTTGAGGAAGAGACT +
Preference number: 4 (lower is better)
Translates to: SALQALSSAFQRASGMVGLCRVW*EVEEET
Trigger: AGTCTCTTCCTCAACCTCCCACCAGACTCTGCAGAG...CCCTACCATCCCTGAGGCTCGCTGGAAGGCACTGCTCAGAGCCTGAAGGGCTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000423191.6
CDS-3UTR CCA 90 bp TGCTGTGAGGATGACGAAACGGTTTGGCAGCCGCTTTTGTGCGCGTCTCCCTTATCTTTGGGCTGGTGGTaGGCAGTGGGCTGCCTCTGC +
Preference number: 4 (lower is better)
Translates to: CCEDDETVWQPLLCASPLSLGWW*AVGCLC
Trigger: GCAGAGGCAGCCCACTGCCCACCACCAGCCCAAAGA...TAAGGGAGACGCGCACAAAAGCGGCTGCCAAACCGTTTCGTCATCCTCACAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000413823.1
CDS-3UTR CCA 90 bp AAGCGTCCGGTCCTTGCTGTGAGGATGACGAAACGGTTTGGCAGCCGCTTTTGTGGTTCTTTGGGCTGGTaGTGGGCAGTGGGCTGCCTC +
Preference number: 4 (lower is better)
Translates to: KRPVLAVRMTKRFGSRFCGSLGW*WAVGCL
Trigger: GAGGCAGCCCACTGCCCACCACCAGCCCAAAGAACC...ACAAAAGCGGCTGCCAAACCGTTTCGTCATCCTCACAGCAAGGACCGGACGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000413823.1
CDS-3UTR CCA 90 bp CACAGTTACCCTGGAGCAAGCAGGTCAGCGGGCGGAAGGTTCCTGCAGGTTCTTCCCATGCATCTGGGGTaGGTGTCCGTTGGTAAGCGA +
Preference number: 4 (lower is better)
Translates to: HSYPGASRSAGGRFLQVLPMHLG*VSVGKR
Trigger: TCGCTTACCAACGGACACCCACCCCAGATGCATGGG...AAGAACCTGCAGGAACCTTCCGCCCGCTGACCTGCTTGCTCCAGGGTAACTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
CDS-3UTR CCA 90 bp GGTCCACAGTTACCCTGGAGCAAGCAGGTCAGCGGGCGGAAGGTTCCTGCAGGTCCTCCTGACAACTCTTaGTCCTCTATTGGCTGGAGG +
Preference number: 4 (lower is better)
Translates to: GPQLPWSKQVSGRKVPAGPPDNS*SSIGWR
Trigger: CCTCCAGCCAATAGAGGACCAAGAGTTGTCAGGAGG...ACCTGCAGGAACCTTCCGCCCGCTGACCTGCTTGCTCCAGGGTAACTGTGGACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358131.5
CDS-3UTR TCA 90 bp CTCGCCAGGGCCAGGAAACAGCTGCAAACGACGTCAAGAACCCAAACCCAAACGGTAGGTCTGGCTGGTTaGCAGGAGCTCTGGGTTTCC +
Preference number: 4 (lower is better)
Translates to: LARARKQLQTTSRTQTQTVGLAG*QELWVS
Trigger: GGAAACCCAGAGCTCCTGTCAACCAGCCAGACCTAC...CGTTTGGGTTTGGGTTCTTGACGTCGTTTGCAGCTGTTTCCTGGCCCTGGCGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
CDS-3UTR TCA 90 bp CACTCGCCAGGGCCAGGAAACAGCTGCAAACGACGTCAAGAACCCAAACCCAAATGGGGTTCTGACCCTTaGTGGCGGCCTGAGTGTCTC +
Preference number: 4 (lower is better)
Translates to: HSPGPGNSCKRRQEPKPKWGSDP*WRPECL
Trigger: GAGACACTCAGGCCGCCATCAAGGGTCAGAACCCCA...TTTGGGTTTGGGTTCTTGACGTCGTTTGCAGCTGTTTCCTGGCCCTGGCGAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000413823.1
CDS-3UTR TCA 90 bp TTTGAGAGAAGCACTGGGCACCAAGACAGACACTCGCCAGGGCCAGGAAACAGCGCTGGTGGGTTTGCCTaGGTGCTCTTGGTCTCACCT +
Preference number: 4 (lower is better)
Translates to: FERSTGHQDRHSPGPGNSAGGFA*VLLVSP
Trigger: AGGTGAGACCAAGAGCACTCAGGCAAACCCACCAGC...GCTGTTTCCTGGCCCTGGCGAGTGTCTGTCTTGGTGCCCAGTGCTTCTCTCAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
CDS-3UTR TCA 90 bp TTTGAGAGAAGCACTGGGCACCAAGACAGACACTCGCCAGGGCCAGGAAACAGCGGAGGCGGGATTAGGTaGGGTAGAGCGATTTGTCCC +
Preference number: 4 (lower is better)
Translates to: FERSTGHQDRHSPGPGNSGGGIR*GRAICP
Trigger: GGGACAAATCGCTCTACCTCACCTAATCCCGCCTCC...GCTGTTTCCTGGCCCTGGCGAGTGTCTGTCTTGGTGCCCAGTGCTTCTCTCAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000413823.1
CDS-3UTR TCA 90 bp CCGGCCCTCTGGCCCATGCATCTGGGGTGGGTGTCCGTTGGTAAGCGACCCCGCTATTATAAAGAGATTTaGGAGAAGCACTGGGCACCA +
Preference number: 4 (lower is better)
Translates to: PALWPMHLGWVSVGKRPRYYKEI*EKHWAP
Trigger: TGGTGCCCAGTGCTTCTCTCAAATCTCTTTATAATA...GCGGGGTCGCTTACCAACGGACACCCACCCCAGATGCATGGGCCAGAGGGCCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000413823.1
CDS-3UTR TCA 90 bp CGGGGGCCGGCCCTCTGGCCCATGCATCTGGGGTGGGTGTCCGTTGGTAAGCGATATTATAAAGAGATTTaGGAGAAGCACTGGGCACCA +
Preference number: 4 (lower is better)
Translates to: RGPALWPMHLGWVSVGKRYYKEI*EKHWAP
Trigger: TGGTGCCCAGTGCTTCTCTCAAATCTCTTTATAATA...TCGCTTACCAACGGACACCCACCCCAGATGCATGGGCCAGAGGGCCGGCCCCCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000413823.1
CDS-3UTR GCA 90 bp TCAGCCCTTCAGGCTCTGAGCAGTGCCTTCCAGCGAGCCTCAGGGATGGTAGGGCCCGAGATCTTGAAATaGACTTCCGACTCCTCTTCC +
Preference number: 4 (lower is better)
Translates to: SALQALSSAFQRASGMVGPEILK*TSDSSS
Trigger: GGAAGAGGAGTCGGAAGTGCATTTCAAGATCTCGGG...CCCTACCATCCCTGAGGCTCGCTGGAAGGCACTGCTCAGAGCCTGAAGGGCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000423191.6
CDS-3UTR GCA 90 bp CAGTGCTCCGGGGTGGCTAGCAAGCGTCCGGTCCTTGCTGTGAGGATGACGAAAGTCTCTGAAGAAGAGTaGGTAGGCCGACACAGGCTT +
Preference number: 4 (lower is better)
Translates to: QCSGVASKRPVLAVRMTKVSEEE*VGRHRL
Trigger: AAGCCTGTGTCGGCCTACGCACTCTTCTTCAGAGAC...TTTCGTCATCCTCACAGCAAGGACCGGACGCTTGCTAGCCACCCCGGAGCACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000413823.1
CDS-3UTR GCA 90 bp GAGGTTGAGGAAGAGACTCAGCCCCCGGGCAATGGGTGTGTCACTGCTCTCTCCGTCTCTGAAGAAGAGTaGGTAGGCCGACACAGGCTT +
Preference number: 4 (lower is better)
Translates to: EVEEETQPPGNGCVTALSVSEEE*VGRHRL
Trigger: AAGCCTGTGTCGGCCTACGCACTCTTCTTCAGAGAC...GGAGAGAGCAGTGACACACCCATTGCCCGGGGGCTGAGTCTCTTCCTCAACCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000423191.6
CDS-3UTR GCA 90 bp TCCGGGGTGGCTAGCAAGCGTCCGGTCCTTGCTGTGAGGATGACGAAACGGTTTAGCAGGATCCCGAGCTaGTGGGGAACTCAGAGATGT +
Preference number: 4 (lower is better)
Translates to: SGVASKRPVLAVRMTKRFSRIPS*WGTQRC
Trigger: ACATCTCTGAGTTCCCCAGCAGCTCGGGATCCTGCT...AAACCGTTTCGTCATCCTCACAGCAAGGACCGGACGCTTGCTAGCCACCCCGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000413823.1
CDS-3UTR GCA 90 bp CTCGCCAGGGCCAGGAAACAGCTGCAAACGACGTCAAGAACCCAAACCCAAACGCCAGGGCCTCTTTTCTaGTGTCAGCCCTTCAGGCTC +
Preference number: 4 (lower is better)
Translates to: LARARKQLQTTSRTQTQTPGPLF*CQPFRL
Trigger: GAGCCTGAAGGGCTGACAGCAGAAAAGAGGCCCTGG...CGTTTGGGTTTGGGTTCTTGACGTCGTTTGCAGCTGTTTCCTGGCCCTGGCGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000413823.1
CDS-3UTR GCA 90 bp CAGACACTCGCCAGGGCCAGGAAACAGCTGCAAACGACGTCAAGAACCCAAACCCCAGGGCCTCTTTTCTaGTGTCAGCCCTTCAGGCTC +
Preference number: 4 (lower is better)
Translates to: QTLARARKQLQTTSRTQTPGPLF*CQPFRL
Trigger: GAGCCTGAAGGGCTGACAGCAGAAAAGAGGCCCTGG...GGTTTGGGTTCTTGACGTCGTTTGCAGCTGTTTCCTGGCCCTGGCGAGTGTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000413823.1
CDS-3UTR GCA 90 bp AGACACTCGCCAGGGCCAGGAAACAGCTGCAAACGACGTCAAGAACCCAAACCCCAATGGGTGTGTCACTaGTCTCTCCGATGGGCCACC +
Preference number: 4 (lower is better)
Translates to: RHSPGPGNSCKRRQEPKPQWVCH*SLRWAT
Trigger: GGTGGCCCATCGGAGAGAGCAGTGACACACCCATTG...GGGTTTGGGTTCTTGACGTCGTTTGCAGCTGTTTCCTGGCCCTGGCGAGTGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000413823.1
CDS-3UTR GCA 90 bp TGTCCAGACATAGGGTACCGTGCGCAGGGCGAGGACAGGGTCCACAGTTACCCTTTAAAAGGAGAGCAGTaGTCCGGGGTGGCTAGCAAG +
Preference number: 4 (lower is better)
Translates to: CPDIGYRAQGEDRVHSYPLKGEQ*SGVASK
Trigger: CTTGCTAGCCACCCCGGAGCACTGCTCTCCTTTTAA...AGGGTAACTGTGGACCCTGTCCTCGCCCTGCGCACGGTACCCTATGTCTGGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
CDS-3UTR GCA 90 bp CACTGGGCACCAAGACAGACACTCGCCAGGGCCAGGAAACAGCTGCAAACGACGTTAAAAGGAGAGCAGTaGTCCGGGGTGGCTAGCAAG +
Preference number: 4 (lower is better)
Translates to: HWAPRQTLARARKQLQTTLKGEQ*SGVASK
Trigger: CTTGCTAGCCACCCCGGAGCACTGCTCTCCTTTTAA...CGTCGTTTGCAGCTGTTTCCTGGCCCTGGCGAGTGTCTGTCTTGGTGCCCAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000413823.1
CDS-3UTR GCA 90 bp CACTGGGCACCAAGACAGACACTCGCCAGGGCCAGGAAACAGCTGCAAACGACGATTCCAATTTGGGCCTaGGTGTTCGGAGCTCCTGGT +
Preference number: 4 (lower is better)
Translates to: HWAPRQTLARARKQLQTTIPIWA*VFGAPG
Trigger: ACCAGGAGCTCCGAACACGCAGGCCCAAATTGGAAT...CGTCGTTTGCAGCTGTTTCCTGGCCCTGGCGAGTGTCTGTCTTGGTGCCCAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358131.5
CDS-3UTR GCA 90 bp TCCGGGGTGGCTAGCAAGCGTCCGGTCCTTGCTGTGAGGATGACGAAACGGTTTATGTGCGGGAAGTCCTaGTTCTGTTCCTCTCCCAGG +
Preference number: 4 (lower is better)
Translates to: SGVASKRPVLAVRMTKRFMCGKS*FCSSPR
Trigger: CCTGGGAGAGGAACAGAAGCAGGACTTCCCGCACAT...AAACCGTTTCGTCATCCTCACAGCAAGGACCGGACGCTTGCTAGCCACCCCGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413823.1
CDS-3UTR CCA 90 bp TCCGGGGTGGCTAGCAAGCGTCCGGTCCTTGCTGTGAGGATGACGAAACGGTTTCGTTGTAGGTCTGGCTaGTTGACAGGAGCTCTGGGT +
Preference number: 4 (lower is better)
Translates to: SGVASKRPVLAVRMTKRFRCRSG*LTGALG
Trigger: ACCCAGAGCTCCTGTCAACCAGCCAGACCTACAACG...AAACCGTTTCGTCATCCTCACAGCAAGGACCGGACGCTTGCTAGCCACCCCGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
CDS-3UTR CCA 90 bp AAGCGTCCGGTCCTTGCTGTGAGGATGACGAAACGGTTTGGCAGCCGCTTTTGTACAGCGAGTGGTAGCTaGCTTCGTGGTCCCCCAGGT +
Preference number: 4 (lower is better)
Translates to: KRPVLAVRMTKRFGSRFCTASGS*LRGPPG
Trigger: ACCTGGGGGACCACGAAGCCAGCTACCACTCGCTGT...ACAAAAGCGGCTGCCAAACCGTTTCGTCATCCTCACAGCAAGGACCGGACGCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
CDS-3UTR CCA 90 bp ACTCGCCAGGGCCAGGAAACAGCTGCAAACGACGTCAAGAACCCAAACCCAAACTGGCCCGACAGCAGGTaGCTGTCCTGTGCTAGCATG +
Preference number: 4 (lower is better)
Translates to: TRQGQETAANDVKNPNPNWPDSR*LSCASM
Trigger: CATGCTAGCACAGGACAGCCACCTGCTGTCGGGCCA...GTTTGGGTTTGGGTTCTTGACGTCGTTTGCAGCTGTTTCCTGGCCCTGGCGAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
CDS-3UTR CCA 90 bp CAAGACAGACACTCGCCAGGGCCAGGAAACAGCTGCAAACGACGTCAAGAACCCATCTGCGAGATGAGCTaGGACTGGCTGAGGGCACTC +
Preference number: 4 (lower is better)
Translates to: QDRHSPGPGNSCKRRQEPICEMS*DWLRAL
Trigger: GAGTGCCCTCAGCCAGTCCCAGCTCATCTCGCAGAT...GGGTTCTTGACGTCGTTTGCAGCTGTTTCCTGGCCCTGGCGAGTGTCTGTCTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
CDS-3UTR CCA 90 bp AGGTTGAGGAAGAGACTCAGCCCCCGGGCAATGGGTGTGTCACTGCTCTCTCCGTTGCCTGAGTGCTCTTaGTCTCACCTTGATCTGGGG +
Preference number: 4 (lower is better)
Translates to: RLRKRLSPRAMGVSLLSPLPECS*SHLDLG
Trigger: CCCCAGATCAAGGTGAGACCAAGAGCACTCAGGCAA...CGGAGAGAGCAGTGACACACCCATTGCCCGGGGGCTGAGTCTCTTCCTCAACCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000423191.6
CDS-3UTR CCA 90 bp GAGGTTGAGGAAGAGACTCAGCCCCCGGGCAATGGGTGTGTCACTGCTCTCTCCTGGGAGCATTTTGGCTaGTGGGTTTGCCTGAGTGCT +
Preference number: 4 (lower is better)
Translates to: EVEEETQPPGNGCVTALSWEHFG*WVCLSA
Trigger: AGCACTCAGGCAAACCCACCAGCCAAAATGCTCCCA...GGAGAGAGCAGTGACACACCCATTGCCCGGGGGCTGAGTCTCTTCCTCAACCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000423191.6
CDS-3UTR CCA 90 bp CAGACACTCGCCAGGGCCAGGAAACAGCTGCAAACGACGTCAAGAACCCAAACCCTGGCATGGCATACATaGGCTGCTTGGGTGGGAGCA +
Preference number: 4 (lower is better)
Translates to: QTLARARKQLQTTSRTQTLAWHT*AAWVGA
Trigger: TGCTCCCACCCAAGCAGCCCATGTATGCCATGCCAG...GGTTTGGGTTCTTGACGTCGTTTGCAGCTGTTTCCTGGCCCTGGCGAGTGTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
CDS-3UTR CCA 90 bp TGCTGTGAGGATGACGAAACGGTTTGGCAGCCGCTTTTGTGCGCGTCTCCCTTAGAAGGAGGCCAGGCCTaGCATGGCATACATGGGCTG +
Preference number: 4 (lower is better)
Translates to: CCEDDETVWQPLLCASPLEGGQA*HGIHGL
Trigger: CAGCCCATGTATGCCATGCCAGGCCTGGCCTCCTTC...TAAGGGAGACGCGCACAAAAGCGGCTGCCAAACCGTTTCGTCATCCTCACAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
CDS-3UTR CCA 90 bp ACTCGCCAGGGCCAGGAAACAGCTGCAAACGACGTCAAGAACCCAAACCCAAACTCAGCCCCCGGGCAATaGGTGTGTCACTGCTCTCTC +
Preference number: 4 (lower is better)
Translates to: TRQGQETAANDVKNPNPNSAPGQ*VCHCSL
Trigger: GAGAGAGCAGTGACACACCCATTGCCCGGGGGCTGA...GTTTGGGTTTGGGTTCTTGACGTCGTTTGCAGCTGTTTCCTGGCCCTGGCGAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000413823.1
CDS-3UTR TCA 90 bp CTCGCCAGGGCCAGGAAACAGCTGCAAACGACGTCAAGAACCCAAACCCAAACGCTCTTGGTCTCACCTTaGTCTGGGGAGCTCTTGGAG +
Preference number: 4 (lower is better)
Translates to: LARARKQLQTTSRTQTQTLLVSP*SGELLE
Trigger: CTCCAAGAGCTCCCCAGATCAAGGTGAGACCAAGAG...CGTTTGGGTTTGGGTTCTTGACGTCGTTTGCAGCTGTTTCCTGGCCCTGGCGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341197.9
ENST00000372999.5
CDS-3UTR TCA 90 bp AAGCGTCCGGTCCTTGCTGTGAGGATGACGAAACGGTTTGGCAGCCGCTTTTGTGCTGGTGGGTTTGCCTaGGTGCTCTTGGTCTCACCT +
Preference number: 4 (lower is better)
Translates to: KRPVLAVRMTKRFGSRFCAGGFA*VLLVSP
Trigger: AGGTGAGACCAAGAGCACTCAGGCAAACCCACCAGC...ACAAAAGCGGCTGCCAAACCGTTTCGTCATCCTCACAGCAAGGACCGGACGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
CDS-3UTR TCA 90 bp TGCTGTGAGGATGACGAAACGGTTTGGCAGCCGCTTTTGTGCGCGTCTCCCTTAGCTGGTGGGTTTGCCTaGGTGCTCTTGGTCTCACCT +
Preference number: 4 (lower is better)
Translates to: CCEDDETVWQPLLCASPLAGGFA*VLLVSP
Trigger: AGGTGAGACCAAGAGCACTCAGGCAAACCCACCAGC...TAAGGGAGACGCGCACAAAAGCGGCTGCCAAACCGTTTCGTCATCCTCACAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
CDS-3UTR TCA 90 bp GGCCGGCCCTCTGGCCCATGCATCTGGGGTGGGTGTCCGTTGGTAAGCGACCCCCCCATTCGTATAAGGTaGAATGGAAAAACCTGTTAT +
Preference number: 4 (lower is better)
Translates to: GRPSGPCIWGGCPLVSDPPIRIR*NGKTCY
Trigger: ATAACAGGTTTTTCCATTTCACCTTATACGAATGGG...GGGGTCGCTTACCAACGGACACCCACCCCAGATGCATGGGCCAGAGGGCCGGCC
57% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000358131.5
CDS-3UTR GCA 90 bp ACTCGCCAGGGCCAGGAAACAGCTGCAAACGACGTCAAGAACCCAAACCCAAACGCTAGCCCGGTAGGCTaGCAGGGCCTTCAGATATTC +
Preference number: 4 (lower is better)
Translates to: TRQGQETAANDVKNPNPNASPVG*QGLQIF
Trigger: GAATATCTGAAGGCCCTGGCAGCCTACCGGGCTAGC...GTTTGGGTTTGGGTTCTTGACGTCGTTTGCAGCTGTTTCCTGGCCCTGGCGAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341197.9
ENST00000372999.5
CDS-3UTR GCA 90 bp AGGTTGAGGAAGAGACTCAGCCCCCGGGCAATGGGTGTGTCACTGCTCTCTCCGATGGCATACATGGGCTaGTTGGGTGGGAGCATTTTG +
Preference number: 4 (lower is better)
Translates to: RLRKRLSPRAMGVSLLSPMAYMG*LGGSIL
Trigger: CAAAATGCTCCCACCCAAGCAGCCCATGTATGCCAT...CGGAGAGAGCAGTGACACACCCATTGCCCGGGGGCTGAGTCTCTTCCTCAACCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000423191.6
CDS-3UTR GCA 90 bp CTCGCCAGGGCCAGGAAACAGCTGCAAACGACGTCAAGAACCCAAACCCAAACGAGCAGGATCCCGAGCTaGTGGGGAACTCAGAGATGT +
Preference number: 4 (lower is better)
Translates to: LARARKQLQTTSRTQTQTSRIPS*WGTQRC
Trigger: ACATCTCTGAGTTCCCCAGCAGCTCGGGATCCTGCT...CGTTTGGGTTTGGGTTCTTGACGTCGTTTGCAGCTGTTTCCTGGCCCTGGCGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000413823.1
CDS-3UTR GCA 90 bp GACACTCGCCAGGGCCAGGAAACAGCTGCAAACGACGTCAAGAACCCAAACCCAGGGCCAGGAAACAGCTaGAAACGACGTCAAGAACCC +
Preference number: 4 (lower is better)
Translates to: DTRQGQETAANDVKNPNPGPGNS*KRRQEP
Trigger: GGGTTCTTGACGTCGTTTGCAGCTGTTTCCTGGCCC...TGGGTTTGGGTTCTTGACGTCGTTTGCAGCTGTTTCCTGGCCCTGGCGAGTGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000413823.1
CDS-3UTR CCA 90 bp TGCTGTGAGGATGACGAAACGGTTTGGCAGCCGCTTTTGTGCGCGTCTCCCTTATGGCTGGGAGGTCCATaGCCTGATAGGAGTAGGCAG +
Preference number: 4 (lower is better)
Translates to: CCEDDETVWQPLLCASPLWLGGP*PDRSRQ
Trigger: CTGCCTACTCCTATCAGGCCATGGACCTCCCAGCCA...TAAGGGAGACGCGCACAAAAGCGGCTGCCAAACCGTTTCGTCATCCTCACAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
CDS-3UTR CCA 90 bp GACACTCGCCAGGGCCAGGAAACAGCTGCAAACGACGTCAAGAACCCAAACCCAGGTCTCACCTTGATCTaGGGAGCTCTTGGAGACGAG +
Preference number: 4 (lower is better)
Translates to: DTRQGQETAANDVKNPNPGLTLI*GALGDE
Trigger: CTCGTCTCCAAGAGCTCCCCAGATCAAGGTGAGACC...TGGGTTTGGGTTCTTGACGTCGTTTGCAGCTGTTTCCTGGCCCTGGCGAGTGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341197.9
ENST00000372999.5
CDS-3UTR CCA 90 bp TGCTGTGAGGATGACGAAACGGTTTGGCAGCCGCTTTTGTGCGCGTCTCCCTTAAGGATCCCGAGCTGCTaGGGAACTCAGAGATGTGCG +
Preference number: 4 (lower is better)
Translates to: CCEDDETVWQPLLCASPLRIPSC*GTQRCA
Trigger: CGCACATCTCTGAGTTCCCCAGCAGCTCGGGATCCT...TAAGGGAGACGCGCACAAAAGCGGCTGCCAAACCGTTTCGTCATCCTCACAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000413823.1
CDS-3UTR CCA 90 bp TCCGGGGTGGCTAGCAAGCGTCCGGTCCTTGCTGTGAGGATGACGAAACGGTTTGGTCTCACCTTGATCTaGGGAGCTCTGCTTCTGTTC +
Preference number: 4 (lower is better)
Translates to: SGVASKRPVLAVRMTKRFGLTLI*GALLLF
Trigger: GAACAGAAGCAGAGCTCCCCAGATCAAGGTGAGACC...AAACCGTTTCGTCATCCTCACAGCAAGGACCGGACGCTTGCTAGCCACCCCGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358131.5
CDS-3UTR TCA 90 bp CAGGGCCAGGAAACAGCTGCAAACGACGTCAAGAACCCAAACCCAAACGAAACCGTAGGTCTGGCTGGTTaGCAGGAGCTCTGGGTTTCC +
Preference number: 4 (lower is better)
Translates to: QGQETAANDVKNPNPNETVGLAG*QELWVS
Trigger: GGAAACCCAGAGCTCCTGTCAACCAGCCAGACCTAC...GGTTTCGTTTGGGTTTGGGTTCTTGACGTCGTTTGCAGCTGTTTCCTGGCCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
CDS-3UTR TCA 90 bp CAGGGCCAGGAAACAGCTGCAAACGACGTCAAGAACCCAAACCCAAACGAAACCGCATGTTGGACACCATaGTGGCTGGGAGGTCCATGG +
Preference number: 4 (lower is better)
Translates to: QGQETAANDVKNPNPNETACWTP*WLGGPW
Trigger: CCATGGACCTCCCAGCCATCATGGTGTCCAACATGC...GGTTTCGTTTGGGTTTGGGTTCTTGACGTCGTTTGCAGCTGTTTCCTGGCCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
CDS-3UTR GCA 90 bp TTGAGGAAGAGACTCAGCCCCCGGGCAATGGGTGTGTCACTGCTCTCTCCGATGCCCGAGATCTTGAAATaGACTTCCGACTCCTCTTCC +
Preference number: 4 (lower is better)
Translates to: LRKRLSPRAMGVSLLSPMPEILK*TSDSSS
Trigger: GGAAGAGGAGTCGGAAGTGCATTTCAAGATCTCGGG...CATCGGAGAGAGCAGTGACACACCCATTGCCCGGGGGCTGAGTCTCTTCCTCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000423191.6
CDS-3UTR GCA 90 bp CTCGCCAGGGCCAGGAAACAGCTGCAAACGACGTCAAGAACCCAAACCCAAACGGTCTCTGAAGAAGAGTaGGTAGGCCGACACAGGCTT +
Preference number: 4 (lower is better)
Translates to: LARARKQLQTTSRTQTQTVSEEE*VGRHRL
Trigger: AAGCCTGTGTCGGCCTACGCACTCTTCTTCAGAGAC...CGTTTGGGTTTGGGTTCTTGACGTCGTTTGCAGCTGTTTCCTGGCCCTGGCGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000413823.1
CDS-3UTR GCA 90 bp CACTCGCCAGGGCCAGGAAACAGCTGCAAACGACGTCAAGAACCCAAACCCAAAAGCAGGATCCCGAGCTaGTGGGGAACTCAGAGATGT +
Preference number: 4 (lower is better)
Translates to: HSPGPGNSCKRRQEPKPKSRIPS*WGTQRC
Trigger: ACATCTCTGAGTTCCCCAGCAGCTCGGGATCCTGCT...TTTGGGTTTGGGTTCTTGACGTCGTTTGCAGCTGTTTCCTGGCCCTGGCGAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000413823.1
CDS-3UTR GCA 90 bp CACTCGCCAGGGCCAGGAAACAGCTGCAAACGACGTCAAGAACCCAAACCCAAAACTGGAAAACCGATGTaGACATCTATGCCGGGGGCC +
Preference number: 4 (lower is better)
Translates to: HSPGPGNSCKRRQEPKPKTGKPM*TSMPGA
Trigger: GGCCCCCGGCATAGATGTGCACATCGGTTTTCCAGT...TTTGGGTTTGGGTTCTTGACGTCGTTTGCAGCTGTTTCCTGGCCCTGGCGAGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000413823.1
CDS-3UTR GCA 90 bp TGCTGTGAGGATGACGAAACGGTTTGGCAGCCGCTTTTGTGCGCGTCTCCCTTAGGGCCAGGAAACAGCTaGAAACGACGTCAAGAACCC +
Preference number: 4 (lower is better)
Translates to: CCEDDETVWQPLLCASPLGPGNS*KRRQEP
Trigger: GGGTTCTTGACGTCGTTTGCAGCTGTTTCCTGGCCC...TAAGGGAGACGCGCACAAAAGCGGCTGCCAAACCGTTTCGTCATCCTCACAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000413823.1
CDS-3UTR GCA 90 bp GACACTCGCCAGGGCCAGGAAACAGCTGCAAACGACGTCAAGAACCCAAACCCACTGCGGAAACACACCTaGAATGCACCAGTGTCTTGC +
Preference number: 4 (lower is better)
Translates to: DTRQGQETAANDVKNPNPLRKHT*NAPVSC
Trigger: GCAAGACACTGGTGCATTGCAGGTGTGTTTCCGCAG...TGGGTTTGGGTTCTTGACGTCGTTTGCAGCTGTTTCCTGGCCCTGGCGAGTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358131.5
CDS-3UTR CCA 90 bp ACTCGCCAGGGCCAGGAAACAGCTGCAAACGACGTCAAGAACCCAAACCCAAACACACGTCACCGAAAGTaGCACTGGGGTTCTGACCCT +
Preference number: 4 (lower is better)
Translates to: TRQGQETAANDVKNPNPNTRHRK*HWGSDP
Trigger: AGGGTCAGAACCCCAGTGCCACTTTCGGTGACGTGT...GTTTGGGTTTGGGTTCTTGACGTCGTTTGCAGCTGTTTCCTGGCCCTGGCGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000413823.1
CDS-3UTR CCA 90 bp TGCTGTGAGGATGACGAAACGGTTTGGCAGCCGCTTTTGTGCGCGTCTCCCTTAACACGTCACCGAAAGTaGCACTGGGGTTCTGACCCT +
Preference number: 4 (lower is better)
Translates to: CCEDDETVWQPLLCASPLTRHRK*HWGSDP
Trigger: AGGGTCAGAACCCCAGTGCCACTTTCGGTGACGTGT...TAAGGGAGACGCGCACAAAAGCGGCTGCCAAACCGTTTCGTCATCCTCACAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000413823.1
CDS-3UTR CCA 90 bp TTTGAGAGAAGCACTGGGCACCAAGACAGACACTCGCCAGGGCCAGGAAACAGCTGGAGGCCACGATTTTaGACACGTCACCGAAAGTGG +
Preference number: 4 (lower is better)
Translates to: FERSTGHQDRHSPGPGNSWRPRF*TRHRKW
Trigger: CCACTTTCGGTGACGTGTCCAAAATCGTGGCCTCCA...GCTGTTTCCTGGCCCTGGCGAGTGTCTGTCTTGGTGCCCAGTGCTTCTCTCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000413823.1
CDS-3UTR CCA 90 bp CTCGCCAGGGCCAGGAAACAGCTGCAAACGACGTCAAGAACCCAAACCCAAACGTGGAGGCCACGATTTTaGACACGTCACCGAAAGTGG +
Preference number: 4 (lower is better)
Translates to: LARARKQLQTTSRTQTQTWRPRF*TRHRKW
Trigger: CCACTTTCGGTGACGTGTCCAAAATCGTGGCCTCCA...CGTTTGGGTTTGGGTTCTTGACGTCGTTTGCAGCTGTTTCCTGGCCCTGGCGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000413823.1
CDS-3UTR CCA 90 bp ACTCGCCAGGGCCAGGAAACAGCTGCAAACGACGTCAAGAACCCAAACCCAAACGGTCTCACCTTGATCTaGGGAGCTCTTGGAGACGAG +
Preference number: 4 (lower is better)
Translates to: TRQGQETAANDVKNPNPNGLTLI*GALGDE
Trigger: CTCGTCTCCAAGAGCTCCCCAGATCAAGGTGAGACC...GTTTGGGTTTGGGTTCTTGACGTCGTTTGCAGCTGTTTCCTGGCCCTGGCGAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341197.9
ENST00000372999.5
CDS-3UTR CCA 90 bp CAGACACTCGCCAGGGCCAGGAAACAGCTGCAAACGACGTCAAGAACCCAAACCTTGCCTGAGTGCTCTTaGTCTCACCTTGATCTGGGG +
Preference number: 4 (lower is better)
Translates to: QTLARARKQLQTTSRTQTLPECS*SHLDLG
Trigger: CCCCAGATCAAGGTGAGACCAAGAGCACTCAGGCAA...GGTTTGGGTTCTTGACGTCGTTTGCAGCTGTTTCCTGGCCCTGGCGAGTGTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
CDS-3UTR CCA 90 bp CAGACACTCGCCAGGGCCAGGAAACAGCTGCAAACGACGTCAAGAACCCAAACCTGGGAGCATTTTGGCTaGTGGGTTTGCCTGAGTGCT +
Preference number: 4 (lower is better)
Translates to: QTLARARKQLQTTSRTQTWEHFG*WVCLSA
Trigger: AGCACTCAGGCAAACCCACCAGCCAAAATGCTCCCA...GGTTTGGGTTCTTGACGTCGTTTGCAGCTGTTTCCTGGCCCTGGCGAGTGTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
CDS-3UTR TCA 90 bp GGAGAGCAGTGCTCCGGGGTGGCTAGCAAGCGTCCGGTCCTTGCTGTGAGGATGTATTATAAAGAGATTTaGGAGAAGCACTGGGCACCA +
Preference number: 4 (lower is better)
Translates to: GEQCSGVASKRPVLAVRMYYKEI*EKHWAP
Trigger: TGGTGCCCAGTGCTTCTCTCAAATCTCTTTATAATA...CATCCTCACAGCAAGGACCGGACGCTTGCTAGCCACCCCGGAGCACTGCTCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000413823.1
CDS-3UTR GCA 90 bp GTCTTCAGCACAGTTCTAAAACACGTAGTCAACTACTTACACGGAACCAACAGTGTGGCTGGCCAGCATTaGCGGGCGACCCAGCAGGGG +
Preference number: 4 (lower is better)
Translates to: VFSTVLKHVVNYLHGTNSVAGQH*RATQQG
Trigger: CCCCTGCTGGGTCGCCCGGCAATGCTGGCCAGCCAC...ACTGTTGGTTCCGTGTAAGTAGTTGACTACGTGTTTTAGAACTGTGCTGAAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
CDS-3UTR GCA 90 bp CAAGACAGACACTCGCCAGGGCCAGGAAACAGCTGCAAACGACGTCAAGAACCCCCCGAGATCTTGAAATaGACTTCCGACTCCTCTTCC +
Preference number: 4 (lower is better)
Translates to: QDRHSPGPGNSCKRRQEPPEILK*TSDSSS
Trigger: GGAAGAGGAGTCGGAAGTGCATTTCAAGATCTCGGG...GGGTTCTTGACGTCGTTTGCAGCTGTTTCCTGGCCCTGGCGAGTGTCTGTCTTG
54% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
CDS-3UTR GCA 90 bp TGCTGTGAGGATGACGAAACGGTTTGGCAGCCGCTTTTGTGCGCGTCTCCCTTAGTCTCTGAAGAAGAGTaGGTAGGCCGACACAGGCTT +
Preference number: 4 (lower is better)
Translates to: CCEDDETVWQPLLCASPLVSEEE*VGRHRL
Trigger: AAGCCTGTGTCGGCCTACGCACTCTTCTTCAGAGAC...TAAGGGAGACGCGCACAAAAGCGGCTGCCAAACCGTTTCGTCATCCTCACAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000413823.1
CDS-3UTR GCA 90 bp CAAGACAGACACTCGCCAGGGCCAGGAAACAGCTGCAAACGACGTCAAGAACCCGTGGGTTTGCCTGAGTaGTCTTGGTCTCACCTTGAT +
Preference number: 4 (lower is better)
Translates to: QDRHSPGPGNSCKRRQEPVGLPE*SWSHLD
Trigger: ATCAAGGTGAGACCAAGAGCACTCAGGCAAACCCAC...GGGTTCTTGACGTCGTTTGCAGCTGTTTCCTGGCCCTGGCGAGTGTCTGTCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
CDS-3UTR GCA 90 bp ACTCGCCAGGGCCAGGAAACAGCTGCAAACGACGTCAAGAACCCAAACCCAAACTTAAAAGGAGAGCAGTaGTCCGGGGTGGCTAGCAAG +
Preference number: 4 (lower is better)
Translates to: TRQGQETAANDVKNPNPNLKGEQ*SGVASK
Trigger: CTTGCTAGCCACCCCGGAGCACTGCTCTCCTTTTAA...GTTTGGGTTTGGGTTCTTGACGTCGTTTGCAGCTGTTTCCTGGCCCTGGCGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000413823.1
CDS-3UTR GCA 90 bp CAAGACAGACACTCGCCAGGGCCAGGAAACAGCTGCAAACGACGTCAAGAACCCGCCTCTGTGCGAGTCTaGTGCATAATCAGCAGAGAA +
Preference number: 4 (lower is better)
Translates to: QDRHSPGPGNSCKRRQEPASVRV*CIISRE
Trigger: TTCTCTGCTGATTATGCAGCAGACTCGCACAGAGGC...GGGTTCTTGACGTCGTTTGCAGCTGTTTCCTGGCCCTGGCGAGTGTCTGTCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358131.5
CDS-3UTR GCA 90 bp GAGGTTGAGGAAGAGACTCAGCCCCCGGGCAATGGGTGTGTCACTGCTCTCTCCTCACCATCAAACTTCTaGGGAAACACACCTGCAATG +
Preference number: 4 (lower is better)
Translates to: EVEEETQPPGNGCVTALSSPSNF*GNTPAM
Trigger: CATTGCAGGTGTGTTTCCGCAGAAGTTTGATGGTGA...GGAGAGAGCAGTGACACACCCATTGCCCGGGGGCTGAGTCTCTTCCTCAACCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358131.5
CDS-3UTR CCA 90 bp TTGAGGAAGAGACTCAGCCCCCGGGCAATGGGTGTGTCACTGCTCTCTCCGATGGCTTCTGCGGCTCATTaGGGTCCTTCTTTTTCTTCT +
Preference number: 4 (lower is better)
Translates to: LRKRLSPRAMGVSLLSPMASAAH*GPSFSS
Trigger: AGAAGAAAAAGAAGGACCCCAATGAGCCGCAGAAGC...CATCGGAGAGAGCAGTGACACACCCATTGCCCGGGGGCTGAGTCTCTTCCTCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000423191.6
CDS-3UTR CCA 90 bp TGCTGTGAGGATGACGAAACGGTTTGGCAGCCGCTTTTGTGCGCGTCTCCCTTATGGAGGCCACGATTTTaGACACGTCACCGAAAGTGG +
Preference number: 4 (lower is better)
Translates to: CCEDDETVWQPLLCASPLWRPRF*TRHRKW
Trigger: CCACTTTCGGTGACGTGTCCAAAATCGTGGCCTCCA...TAAGGGAGACGCGCACAAAAGCGGCTGCCAAACCGTTTCGTCATCCTCACAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000413823.1
CDS-3UTR CCA 90 bp TGCTGTGAGGATGACGAAACGGTTTGGCAGCCGCTTTTGTGCGCGTCTCCCTTATTGCCTGAGTGCTCTTaGTCTCACCTTGATCTGGGG +
Preference number: 4 (lower is better)
Translates to: CCEDDETVWQPLLCASPLLPECS*SHLDLG
Trigger: CCCCAGATCAAGGTGAGACCAAGAGCACTCAGGCAA...TAAGGGAGACGCGCACAAAAGCGGCTGCCAAACCGTTTCGTCATCCTCACAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
CDS-3UTR CCA 90 bp AGACACTCGCCAGGGCCAGGAAACAGCTGCAAACGACGTCAAGAACCCAAACCCGAGCATTTTGGCTGGTaGGTTTGCCTGAGTGCTCTT +
Preference number: 4 (lower is better)
Translates to: RHSPGPGNSCKRRQEPKPEHFGW*VCLSAL
Trigger: AAGAGCACTCAGGCAAACCCACCAGCCAAAATGCTC...GGGTTTGGGTTCTTGACGTCGTTTGCAGCTGTTTCCTGGCCCTGGCGAGTGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
CDS-3UTR CCA 90 bp CCTTCAGGCTCTGAGCAGTGCCTTCCAGCGAGCCTCAGGGATGGTAGGGAGGCGATCTTTTGTTCACACTaGAAAACCGATGTGCACATC +
Preference number: 4 (lower is better)
Translates to: PSGSEQCLPASLRDGREAIFCSH*KTDVHI
Trigger: GATGTGCACATCGGTTTTCCAGTGTGAACAAAAGAT...CGCCTCCCTACCATCCCTGAGGCTCGCTGGAAGGCACTGCTCAGAGCCTGAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
CDS-3UTR CCA 90 bp AGACACTCGCCAGGGCCAGGAAACAGCTGCAAACGACGTCAAGAACCCAAACCCTCTCCTATTCCAATTTaGGCCTGCGTGTTCGGAGCT +
Preference number: 4 (lower is better)
Translates to: RHSPGPGNSCKRRQEPKPSPIPI*ACVFGA
Trigger: AGCTCCGAACACGCAGGCCCAAATTGGAATAGGAGA...GGGTTTGGGTTCTTGACGTCGTTTGCAGCTGTTTCCTGGCCCTGGCGAGTGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358131.5
CDS-3UTR TCA 90 bp AGTTTTATTATAAAGAGATTTGAGAGAAGCACTGGGCACCAAGACAGACACTCGGGTGCAGTGTGGGGCTaGGCGGGAAGGAGGGTGGCG +
Preference number: 4 (lower is better)
Translates to: SFIIKRFERSTGHQDRHSGAVWG*AGRRVA
Trigger: CGCCACCCTCCTTCCCGCTCAGCCCCACACTGCACC...CGAGTGTCTGTCTTGGTGCCCAGTGCTTCTCTCAAATCTCTTTATAATAAAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
CDS-3UTR GCA 90 bp TTCAGCACAGTTCTAAAACACGTAGTCAACTACTTACACGGAACCAACAGTTTCGTGGCTGGCCAGCATTaGCGGGCGACCCAGCAGGGG +
Preference number: 4 (lower is better)
Translates to: FSTVLKHVVNYLHGTNSFVAGQH*RATQQG
Trigger: CCCCTGCTGGGTCGCCCGGCAATGCTGGCCAGCCAC...GAAACTGTTGGTTCCGTGTAAGTAGTTGACTACGTGTTTTAGAACTGTGCTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
CDS-3UTR GCA 90 bp CCTTCAGGCTCTGAGCAGTGCCTTCCAGCGAGCCTCAGGGATGGTAGGGAGGCGATATTCCTTCTTTGCTaGTTCTGTCTTCCTCTTGTA +
Preference number: 4 (lower is better)
Translates to: PSGSEQCLPASLRDGREAIFLLC*FCLPLV
Trigger: TACAAGAGGAAGACAGAAGCAGCAAAGAAGGAATAT...CGCCTCCCTACCATCCCTGAGGCTCGCTGGAAGGCACTGCTCAGAGCCTGAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341197.9
ENST00000372999.5
ENST00000423191.6
CDS-3UTR CCA 90 bp CAGGGCCAGGAAACAGCTGCAAACGACGTCAAGAACCCAAACCCAAACGAAACCCTCTGCAGAGTCTGGTaGGAGGTTGAGGAAGAGACT +
Preference number: 4 (lower is better)
Translates to: QGQETAANDVKNPNPNETLCRVW*EVEEET
Trigger: AGTCTCTTCCTCAACCTCCCACCAGACTCTGCAGAG...GGTTTCGTTTGGGTTTGGGTTCTTGACGTCGTTTGCAGCTGTTTCCTGGCCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000413823.1
CDS-3UTR TCA 90 bp CTCGCCAGGGCCAGGAAACAGCTGCAAACGACGTCAAGAACCCAAACCCAAACGCTTTATAAGCCCTCCTaGCAACTCTTGGTCCTCTAT +
Preference number: 4 (lower is better)
Translates to: LARARKQLQTTSRTQTQTLYKPS*QLLVLY
Trigger: ATAGAGGACCAAGAGTTGTCAGGAGGGCTTATAAAG...CGTTTGGGTTTGGGTTCTTGACGTCGTTTGCAGCTGTTTCCTGGCCCTGGCGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358131.5
CDS-3UTR GCA 90 bp TTCAGCACAGTTCTAAAACACGTAGTCAACTACTTACACGGAACCAACAGTTTCAGGGGGTCGCTGACTTaGTCCCCGGCGGTGATGGGG +
Preference number: 4 (lower is better)
Translates to: FSTVLKHVVNYLHGTNSFRGSLT*SPAVMG
Trigger: CCCCATCACCGCCGGGGAGCAAGTCAGCGACCCCCT...GAAACTGTTGGTTCCGTGTAAGTAGTTGACTACGTGTTTTAGAACTGTGCTGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
CDS-3UTR GCA 90 bp AGTTTTATTATAAAGAGATTTGAGAGAAGCACTGGGCACCAAGACAGACACTCGAGGGGGTCGCTGACTTaGTCCCCGGCGGTGATGGGG +
Preference number: 4 (lower is better)
Translates to: SFIIKRFERSTGHQDRHSRGSLT*SPAVMG
Trigger: CCCCATCACCGCCGGGGAGCAAGTCAGCGACCCCCT...CGAGTGTCTGTCTTGGTGCCCAGTGCTTCTCTCAAATCTCTTTATAATAAAACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
CDS-3UTR GCA 90 bp GGTCCACAGTTACCCTGGAGCAAGCAGGTCAGCGGGCGGAAGGTTCCTGCAGGTATATTCCTTCTTTGCTaGTTCTGTCTTCCTCTTGTA +
Preference number: 4 (lower is better)
Translates to: GPQLPWSKQVSGRKVPAGIFLLC*FCLPLV
Trigger: TACAAGAGGAAGACAGAAGCAGCAAAGAAGGAATAT...ACCTGCAGGAACCTTCCGCCCGCTGACCTGCTTGCTCCAGGGTAACTGTGGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341197.9
ENST00000372999.5
CDS-3UTR GCA 90 bp CAGGGCCAGGAAACAGCTGCAAACGACGTCAAGAACCCAAACCCAAACGAAACCATGGCATACATGGGCTaGTTGGGTGGGAGCATTTTG +
Preference number: 4 (lower is better)
Translates to: QGQETAANDVKNPNPNETMAYMG*LGGSIL
Trigger: CAAAATGCTCCCACCCAAGCAGCCCATGTATGCCAT...GGTTTCGTTTGGGTTTGGGTTCTTGACGTCGTTTGCAGCTGTTTCCTGGCCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
CDS-3UTR GCA 90 bp GAGGTTGAGGAAGAGACTCAGCCCCCGGGCAATGGGTGTGTCACTGCTCTCTCCAAATTCTGCAAATTATaGCATAGCTTCAGTGGAGCC +
Preference number: 4 (lower is better)
Translates to: EVEEETQPPGNGCVTALSKFCKL*HSFSGA
Trigger: GGCTCCACTGAAGCTATGGCATAATTTGCAGAATTT...GGAGAGAGCAGTGACACACCCATTGCCCGGGGGCTGAGTCTCTTCCTCAACCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372999.5
CDS-3UTR CCA 90 bp TGCTGTGAGGATGACGAAACGGTTTGGCAGCCGCTTTTGTGCGCGTCTCCCTTAGCTTCTGCGGCTCATTaGGGTCCTTCTTTTTCTTCT +
Preference number: 4 (lower is better)
Translates to: CCEDDETVWQPLLCASPLASAAH*GPSFSS
Trigger: AGAAGAAAAAGAAGGACCCCAATGAGCCGCAGAAGC...TAAGGGAGACGCGCACAAAAGCGGCTGCCAAACCGTTTCGTCATCCTCACAGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000413823.1
CDS-3UTR CCA 90 bp AAGCGTCCGGTCCTTGCTGTGAGGATGACGAAACGGTTTGGCAGCCGCTTTTGTGCTTCTGCGGCTCATTaGGGTCCTTCTTTTTCTTCT +
Preference number: 4 (lower is better)
Translates to: KRPVLAVRMTKRFGSRFCASAAH*GPSFSS
Trigger: AGAAGAAAAAGAAGGACCCCAATGAGCCGCAGAAGC...ACAAAAGCGGCTGCCAAACCGTTTCGTCATCCTCACAGCAAGGACCGGACGCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000413823.1
CDS-3UTR GCA 90 bp CACTGGGCACCAAGACAGACACTCGCCAGGGCCAGGAAACAGCTGCAAACGACGATATTCCTTCTTTGCTaGTTCTGTCTTCCTCTTGTA +
Preference number: 4 (lower is better)
Translates to: HWAPRQTLARARKQLQTTIFLLC*FCLPLV
Trigger: TACAAGAGGAAGACAGAAGCAGCAAAGAAGGAATAT...CGTCGTTTGCAGCTGTTTCCTGGCCCTGGCGAGTGTCTGTCTTGGTGCCCAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341197.9
ENST00000372999.5
CDS-3UTR GCA 90 bp AAAACACGTAGTCAACTACTTACACGGAACCAACAGTTTCTAGGTTTCGTAATCCCACTGCGGAAGGCCTaGAGGTCCGACGGCGTCAGG +
Preference number: 4 (lower is better)
Translates to: KTRSQLLTRNQQFLGFVIPLRKA*RSDGVR
Trigger: CCTGACGCCGTCGGACCTGCAGGCCTTCCGCAGTGG...GATTACGAAACCTAGAAACTGTTGGTTCCGTGTAAGTAGTTGACTACGTGTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
CDS-3UTR GCA 90 bp AGTTTTATTATAAAGAGATTTGAGAGAAGCACTGGGCACCAAGACAGACACTCGGGGGGCAGTGACAGCTaGTGGTGCAGTGTGGGGCTG +
Preference number: 4 (lower is better)
Translates to: SFIIKRFERSTGHQDRHSGGSDS*WCSVGL
Trigger: CAGCCCCACACTGCACCAGCAGCTGTCACTGCCCCC...CGAGTGTCTGTCTTGGTGCCCAGTGCTTCTCTCAAATCTCTTTATAATAAAACT
51% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
CDS-3UTR GCA 90 bp ACTCGCCAGGGCCAGGAAACAGCTGCAAACGACGTCAAGAACCCAAACCCAAACTCTGTGCGAGTCTGCTaGATAATCAGCAGAGAAAGA +
Preference number: 4 (lower is better)
Translates to: TRQGQETAANDVKNPNPNSVRVC*IISRER
Trigger: TCTTTCTCTGCTGATTATGCAGCAGACTCGCACAGA...GTTTGGGTTTGGGTTCTTGACGTCGTTTGCAGCTGTTTCCTGGCCCTGGCGAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358131.5
CDS-3UTR GCA 90 bp GACAGACACTCGCCAGGGCCAGGAAACAGCTGCAAACGACGTCAAGAACCCAAACTGTCACCATCAAAATaGACAGATCCACAGCTCTCA +
Preference number: 4 (lower is better)
Translates to: DRHSPGPGNSCKRRQEPKLSPSK*TDPQLS
Trigger: TGAGAGCTGTGGATCTGTGCATTTTGATGGTGACAG...TTTGGGTTCTTGACGTCGTTTGCAGCTGTTTCCTGGCCCTGGCGAGTGTCTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372999.5
CDS-3UTR CCA 90 bp GTCTTCAGCACAGTTCTAAAACACGTAGTCAACTACTTACACGGAACCAACAGTCTTCCTGAGTGGAGCTaGAGGGAGAGGGGGTCGCTG +
Preference number: 4 (lower is better)
Translates to: VFSTVLKHVVNYLHGTNSLPEWS*RERGSL
Trigger: CAGCGACCCCCTCTCCCTCCAGCTCCACTCAGGAAG...ACTGTTGGTTCCGTGTAAGTAGTTGACTACGTGTTTTAGAACTGTGCTGAAGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
CDS-3UTR CCA 90 bp CACAGTTACCCTGGAGCAAGCAGGTCAGCGGGCGGAAGGTTCCTGCAGGTTCTTATCTTTTGTTCACACTaGAAAACCGATGTGCACATC +
Preference number: 4 (lower is better)
Translates to: HSYPGASRSAGGRFLQVLIFCSH*KTDVHI
Trigger: GATGTGCACATCGGTTTTCCAGTGTGAACAAAAGAT...AAGAACCTGCAGGAACCTTCCGCCCGCTGACCTGCTTGCTCCAGGGTAACTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
CDS-3UTR CCA 90 bp TTGAGGAAGAGACTCAGCCCCCGGGCAATGGGTGTGTCACTGCTCTCTCCGATGATCTTTTGTTCACACTaGAAAACCGATGTGCACATC +
Preference number: 4 (lower is better)
Translates to: LRKRLSPRAMGVSLLSPMIFCSH*KTDVHI
Trigger: GATGTGCACATCGGTTTTCCAGTGTGAACAAAAGAT...CATCGGAGAGAGCAGTGACACACCCATTGCCCGGGGGCTGAGTCTCTTCCTCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
CDS-3UTR CCA 90 bp TTCAGCACAGTTCTAAAACACGTAGTCAACTACTTACACGGAACCAACAGTTTCAGCAGTGCTCCGGGGTaGCTAGCAAGCGTCCGGTCC +
Preference number: 4 (lower is better)
Translates to: FSTVLKHVVNYLHGTNSFSSAPG*LASVRS
Trigger: GGACCGGACGCTTGCTAGCCACCCCGGAGCACTGCT...GAAACTGTTGGTTCCGTGTAAGTAGTTGACTACGTGTTTTAGAACTGTGCTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000413823.1
CDS-3UTR TCA 90 bp AAAACACGTAGTCAACTACTTACACGGAACCAACAGTTTCTAGGTTTCGTAATCGCAGGCTGCAGGTGCTaGTGCCACACTCCCCACTGG +
Preference number: 4 (lower is better)
Translates to: KTRSQLLTRNQQFLGFVIAGCRC*CHTPHW
Trigger: CCAGTGGGGAGTGTGGCATCAGCACCTGCAGCCTGC...GATTACGAAACCTAGAAACTGTTGGTTCCGTGTAAGTAGTTGACTACGTGTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000413823.1
CDS-3UTR GCA 90 bp GTCTTCAGCACAGTTCTAAAACACGTAGTCAACTACTTACACGGAACCAACAGTGCAGTGGGCTGCCTCTaGAGAGTCTGGTGGGAGGTT +
Preference number: 4 (lower is better)
Translates to: VFSTVLKHVVNYLHGTNSAVGCL*RVWWEV
Trigger: AACCTCCCACCAGACTCTGCAGAGGCAGCCCACTGC...ACTGTTGGTTCCGTGTAAGTAGTTGACTACGTGTTTTAGAACTGTGCTGAAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000413823.1
CDS-3UTR CCA 90 bp TTCAGCACAGTTCTAAAACACGTAGTCAACTACTTACACGGAACCAACAGTTTCCCATCTCCTGGATCGTaGGCAGCTGGCCCGACAGCA +
Preference number: 4 (lower is better)
Translates to: FSTVLKHVVNYLHGTNSFPSPGS*AAGPTA
Trigger: TGCTGTCGGGCCAGCTGCCCACGATCCAGGAGATGG...GAAACTGTTGGTTCCGTGTAAGTAGTTGACTACGTGTTTTAGAACTGTGCTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
CDS-3UTR CCA 90 bp TTCAGCACAGTTCTAAAACACGTAGTCAACTACTTACACGGAACCAACAGTTTCGGTGATGGGGAGCTGTaGGCGATGCTGCTCCGGATG +
Preference number: 4 (lower is better)
Translates to: FSTVLKHVVNYLHGTNSFGDGEL*AMLLRM
Trigger: CATCCGGAGCAGCATCGCCCACAGCTCCCCATCACC...GAAACTGTTGGTTCCGTGTAAGTAGTTGACTACGTGTTTTAGAACTGTGCTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
CDS-3UTR CCA 90 bp TTCAGCACAGTTCTAAAACACGTAGTCAACTACTTACACGGAACCAACAGTTTCCTTCCTGAGTGGAGCTaGAGGGAGAGGGGGTCGCTG +
Preference number: 4 (lower is better)
Translates to: FSTVLKHVVNYLHGTNSFLPEWS*RERGSL
Trigger: CAGCGACCCCCTCTCCCTCCAGCTCCACTCAGGAAG...GAAACTGTTGGTTCCGTGTAAGTAGTTGACTACGTGTTTTAGAACTGTGCTGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
CDS-3UTR CCA 90 bp AAAACACGTAGTCAACTACTTACACGGAACCAACAGTTTCTAGGTTTCGTAATCCACTGCTCTCTCCGATaGGCCACCCTGCCTCTGGCC +
Preference number: 4 (lower is better)
Translates to: KTRSQLLTRNQQFLGFVIHCSLR*ATLPLA
Trigger: GGCCAGAGGCAGGGTGGCCCATCGGAGAGAGCAGTG...GATTACGAAACCTAGAAACTGTTGGTTCCGTGTAAGTAGTTGACTACGTGTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000413823.1
CDS-3UTR GCA 90 bp TTCAGCACAGTTCTAAAACACGTAGTCAACTACTTACACGGAACCAACAGTTTCCGGGCGGAAGGTTCCTaGAGGTTCTTTGGGCTGGTG +
Preference number: 4 (lower is better)
Translates to: FSTVLKHVVNYLHGTNSFRAEGS*RFFGLV
Trigger: CACCAGCCCAAAGAACCTGCAGGAACCTTCCGCCCG...GAAACTGTTGGTTCCGTGTAAGTAGTTGACTACGTGTTTTAGAACTGTGCTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000413823.1
CDS-3UTR GCA 90 bp AGTTTTATTATAAAGAGATTTGAGAGAAGCACTGGGCACCAAGACAGACACTCGCGGGCGGAAGGTTCCTaGAGGTTCTTTGGGCTGGTG +
Preference number: 4 (lower is better)
Translates to: SFIIKRFERSTGHQDRHSRAEGS*RFFGLV
Trigger: CACCAGCCCAAAGAACCTGCAGGAACCTTCCGCCCG...CGAGTGTCTGTCTTGGTGCCCAGTGCTTCTCTCAAATCTCTTTATAATAAAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000413823.1
CDS-3UTR CCA 90 bp TTCAGCACAGTTCTAAAACACGTAGTCAACTACTTACACGGAACCAACAGTTTCACAGCGAGTGGTAGCTaGCTTCGTGGTCCCCCAGGT +
Preference number: 4 (lower is better)
Translates to: FSTVLKHVVNYLHGTNSFTASGS*LRGPPG
Trigger: ACCTGGGGGACCACGAAGCCAGCTACCACTCGCTGT...GAAACTGTTGGTTCCGTGTAAGTAGTTGACTACGTGTTTTAGAACTGTGCTGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
CDS-3UTR CCA 90 bp AGTTTTATTATAAAGAGATTTGAGAGAAGCACTGGGCACCAAGACAGACACTCGTCAGCCCCCGGGCAATaGGTGTGTCACTGCTCTCTC +
Preference number: 4 (lower is better)
Translates to: SFIIKRFERSTGHQDRHSSAPGQ*VCHCSL
Trigger: GAGAGAGCAGTGACACACCCATTGCCCGGGGGCTGA...CGAGTGTCTGTCTTGGTGCCCAGTGCTTCTCTCAAATCTCTTTATAATAAAACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000413823.1
CDS-3UTR CCA 90 bp AAAACACGTAGTCAACTACTTACACGGAACCAACAGTTTCTAGGTTTCGTAATCTCTTTGGGCTGGTGGTaGGCAGTGGGCTGCCTCTGC +
Preference number: 4 (lower is better)
Translates to: KTRSQLLTRNQQFLGFVISLGWW*AVGCLC
Trigger: GCAGAGGCAGCCCACTGCCCACCACCAGCCCAAAGA...GATTACGAAACCTAGAAACTGTTGGTTCCGTGTAAGTAGTTGACTACGTGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000413823.1
CDS-3UTR CCA 90 bp CACTCGCCAGGGCCAGGAAACAGCTGCAAACGACGTCAAGAACCCAAACCCAAAATCTTTTGTTCACACTaGAAAACCGATGTGCACATC +
Preference number: 4 (lower is better)
Translates to: HSPGPGNSCKRRQEPKPKIFCSH*KTDVHI
Trigger: GATGTGCACATCGGTTTTCCAGTGTGAACAAAAGAT...TTTGGGTTTGGGTTCTTGACGTCGTTTGCAGCTGTTTCCTGGCCCTGGCGAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000413823.1
CDS-3UTR TCA 90 bp CAGGGCCAGGAAACAGCTGCAAACGACGTCAAGAACCCAAACCCAAACGAAACCTATTATAAAGAGATTTaGGAGAAGCACTGGGCACCA +
Preference number: 4 (lower is better)
Translates to: QGQETAANDVKNPNPNETYYKEI*EKHWAP
Trigger: TGGTGCCCAGTGCTTCTCTCAAATCTCTTTATAATA...GGTTTCGTTTGGGTTTGGGTTCTTGACGTCGTTTGCAGCTGTTTCCTGGCCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000413823.1
CDS-3UTR GCA 90 bp AGTTTTATTATAAAGAGATTTGAGAGAAGCACTGGGCACCAAGACAGACACTCGGGGAACTCAGAGATGTaGGGGAAGTCCTGTGGCCCT +
Preference number: 4 (lower is better)
Translates to: SFIIKRFERSTGHQDRHSGNSEM*GKSCGP
Trigger: AGGGCCACAGGACTTCCCGCACATCTCTGAGTTCCC...CGAGTGTCTGTCTTGGTGCCCAGTGCTTCTCTCAAATCTCTTTATAATAAAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
CDS-3UTR GCA 90 bp GTCTTCAGCACAGTTCTAAAACACGTAGTCAACTACTTACACGGAACCAACAGTGGGCCAGGAAACAGCTaGAAACGACGTCAAGAACCC +
Preference number: 4 (lower is better)
Translates to: VFSTVLKHVVNYLHGTNSGPGNS*KRRQEP
Trigger: GGGTTCTTGACGTCGTTTGCAGCTGTTTCCTGGCCC...ACTGTTGGTTCCGTGTAAGTAGTTGACTACGTGTTTTAGAACTGTGCTGAAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000413823.1
CDS-3UTR CCA 90 bp GTCTTCAGCACAGTTCTAAAACACGTAGTCAACTACTTACACGGAACCAACAGTACACGTCACCGAAAGTaGCACTGGGGTTCTGACCCT +
Preference number: 4 (lower is better)
Translates to: VFSTVLKHVVNYLHGTNSTRHRK*HWGSDP
Trigger: AGGGTCAGAACCCCAGTGCCACTTTCGGTGACGTGT...ACTGTTGGTTCCGTGTAAGTAGTTGACTACGTGTTTTAGAACTGTGCTGAAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000413823.1
CDS-3UTR TCA 90 bp TTCAGCACAGTTCTAAAACACGTAGTCAACTACTTACACGGAACCAACAGTTTCCTCTTGGTCTCACCTTaGTCTGGGGAGCTCTTGGAG +
Preference number: 4 (lower is better)
Translates to: FSTVLKHVVNYLHGTNSFLLVSP*SGELLE
Trigger: CTCCAAGAGCTCCCCAGATCAAGGTGAGACCAAGAG...GAAACTGTTGGTTCCGTGTAAGTAGTTGACTACGTGTTTTAGAACTGTGCTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341197.9
ENST00000372999.5
CDS-3UTR GCA 90 bp AGTTTTATTATAAAGAGATTTGAGAGAAGCACTGGGCACCAAGACAGACACTCGGGGCCAGGAAACAGCTaGAAACGACGTCAAGAACCC +
Preference number: 4 (lower is better)
Translates to: SFIIKRFERSTGHQDRHSGPGNS*KRRQEP
Trigger: GGGTTCTTGACGTCGTTTGCAGCTGTTTCCTGGCCC...CGAGTGTCTGTCTTGGTGCCCAGTGCTTCTCTCAAATCTCTTTATAATAAAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000413823.1
CDS-3UTR CCA 90 bp AGTTTTATTATAAAGAGATTTGAGAGAAGCACTGGGCACCAAGACAGACACTCGGGACACCATGATGGCTaGGAGGTCCATGGCCTGATA +
Preference number: 4 (lower is better)
Translates to: SFIIKRFERSTGHQDRHSGHHDG*EVHGLI
Trigger: TATCAGGCCATGGACCTCCCAGCCATCATGGTGTCC...CGAGTGTCTGTCTTGGTGCCCAGTGCTTCTCTCAAATCTCTTTATAATAAAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
CDS-3UTR CCA 90 bp AAAACACGTAGTCAACTACTTACACGGAACCAACAGTTTCTAGGTTTCGTAATCTCTGGCCCATGCATCTaGGGTGGGTGTCCGTTGGTA +
Preference number: 4 (lower is better)
Translates to: KTRSQLLTRNQQFLGFVISGPCI*GGCPLV
Trigger: TACCAACGGACACCCACCCCAGATGCATGGGCCAGA...GATTACGAAACCTAGAAACTGTTGGTTCCGTGTAAGTAGTTGACTACGTGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000413823.1
CDS-3UTR CCA 90 bp TTCAGCACAGTTCTAAAACACGTAGTCAACTACTTACACGGAACCAACAGTTTCGATGACGAAACGGTTTaGCAGCCGCTTTTGTGCGCG +
Preference number: 4 (lower is better)
Translates to: FSTVLKHVVNYLHGTNSFDDETV*QPLLCA
Trigger: CGCGCACAAAAGCGGCTGCCAAACCGTTTCGTCATC...GAAACTGTTGGTTCCGTGTAAGTAGTTGACTACGTGTTTTAGAACTGTGCTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000413823.1
CDS-3UTR GCA 90 bp TTCAGCACAGTTCTAAAACACGTAGTCAACTACTTACACGGAACCAACAGTTTCGTCTCTGAAGAAGAGTaGGTAGGCCGACACAGGCTT +
Preference number: 4 (lower is better)
Translates to: FSTVLKHVVNYLHGTNSFVSEEE*VGRHRL
Trigger: AAGCCTGTGTCGGCCTACGCACTCTTCTTCAGAGAC...GAAACTGTTGGTTCCGTGTAAGTAGTTGACTACGTGTTTTAGAACTGTGCTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000413823.1
CDS-3UTR GCA 90 bp GTCTTCAGCACAGTTCTAAAACACGTAGTCAACTACTTACACGGAACCAACAGTATGGCATACATGGGCTaGTTGGGTGGGAGCATTTTG +
Preference number: 4 (lower is better)
Translates to: VFSTVLKHVVNYLHGTNSMAYMG*LGGSIL
Trigger: CAAAATGCTCCCACCCAAGCAGCCCATGTATGCCAT...ACTGTTGGTTCCGTGTAAGTAGTTGACTACGTGTTTTAGAACTGTGCTGAAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
CDS-3UTR GCA 90 bp CAGGGCCAGGAAACAGCTGCAAACGACGTCAAGAACCCAAACCCAAACGAAACCATGAAGTGCAAATTCTaGAAATTATGCCATAGCTTC +
Preference number: 4 (lower is better)
Translates to: QGQETAANDVKNPNPNETMKCKF*KLCHSF
Trigger: GAAGCTATGGCATAATTTGCAGAATTTGCACTTCAT...GGTTTCGTTTGGGTTTGGGTTCTTGACGTCGTTTGCAGCTGTTTCCTGGCCCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372999.5
CDS-3UTR CCA 90 bp AAAACACGTAGTCAACTACTTACACGGAACCAACAGTTTCTAGGTTTCGTAATCACACGTCACCGAAAGTaGCACTGGGGTTCTGACCCT +
Preference number: 4 (lower is better)
Translates to: KTRSQLLTRNQQFLGFVITRHRK*HWGSDP
Trigger: AGGGTCAGAACCCCAGTGCCACTTTCGGTGACGTGT...GATTACGAAACCTAGAAACTGTTGGTTCCGTGTAAGTAGTTGACTACGTGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000413823.1
CDS-3UTR CCA 90 bp TTCAGCACAGTTCTAAAACACGTAGTCAACTACTTACACGGAACCAACAGTTTCCTCTGCAGAGTCTGGTaGGAGGTTGAGGAAGAGACT +
Preference number: 4 (lower is better)
Translates to: FSTVLKHVVNYLHGTNSFLCRVW*EVEEET
Trigger: AGTCTCTTCCTCAACCTCCCACCAGACTCTGCAGAG...GAAACTGTTGGTTCCGTGTAAGTAGTTGACTACGTGTTTTAGAACTGTGCTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000413823.1
CDS-3UTR GCA 90 bp AAAACACGTAGTCAACTACTTACACGGAACCAACAGTTTCTAGGTTTCGTAATCTTAAAAGGAGAGCAGTaGTCCGGGGTGGCTAGCAAG +
Preference number: 4 (lower is better)
Translates to: KTRSQLLTRNQQFLGFVILKGEQ*SGVASK
Trigger: CTTGCTAGCCACCCCGGAGCACTGCTCTCCTTTTAA...GATTACGAAACCTAGAAACTGTTGGTTCCGTGTAAGTAGTTGACTACGTGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000413823.1
CDS-3UTR CCA 90 bp AAAACACGTAGTCAACTACTTACACGGAACCAACAGTTTCTAGGTTTCGTAATCTGGAGGCCACGATTTTaGACACGTCACCGAAAGTGG +
Preference number: 4 (lower is better)
Translates to: KTRSQLLTRNQQFLGFVIWRPRF*TRHRKW
Trigger: CCACTTTCGGTGACGTGTCCAAAATCGTGGCCTCCA...GATTACGAAACCTAGAAACTGTTGGTTCCGTGTAAGTAGTTGACTACGTGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000413823.1
CDS-3UTR GCA 90 bp AAAACACGTAGTCAACTACTTACACGGAACCAACAGTTTCTAGGTTTCGTAATCGTGGGTTTGCCTGAGTaGTCTTGGTCTCACCTTGAT +
Preference number: 4 (lower is better)
Translates to: KTRSQLLTRNQQFLGFVIVGLPE*SWSHLD
Trigger: ATCAAGGTGAGACCAAGAGCACTCAGGCAAACCCAC...GATTACGAAACCTAGAAACTGTTGGTTCCGTGTAAGTAGTTGACTACGTGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
3UTR CAA 72 bp TACACGGAACCAACAGTTTCTAGGTTTCGTAATCTTTaGTTCACACTGGAAAACCGATGTGCACATCTATGC +
Preference number: 4 (lower is better)
Translates to: YTEPTVSRFRNL*FTLENRCAHLC
Trigger: GCATAGATGTGCACATCGGTTTTCCAGTGTGAACAAAAGATTACGAAACCTAGAAACTGTTGGTTCCGTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000413823.1
CDS GCA 90 bp AGCGTCCGGGCGAGGCTGGCAGGGGAGGCCCCACTGCGGAAGGCCTaGAGGTCCGACGGCGTCAGGAAGGAGGCCAGGCCTGGCATGGCA +
Preference number: 5 (lower is better)
Translates to: SVRARLAGEAPLRKA*RSDGVRKEARPGMA
Trigger: TGCCATGCCAGGCCTGGCCTCCTTCCTGACGCCGTCGGACCTGCAGGCCTTCCGCAGTGGGGCCTCCCCTGCCAGCCTCGCCCGGACGCT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000423191.6
ENST00000435864.2
CDS GCA 90 bp ACTTGGAGCCCAGCGTCCGGGCGAGGCTGGCAGGGGAGGCCCCACTaGGGAAGGCCTGCAGGTCCGACGGCGTCAGGAAGGAGGCCAGGC +
Preference number: 5 (lower is better)
Translates to: TWSPASGRGWQGRPH*GRPAGPTASGRRPG
Trigger: GCCTGGCCTCCTTCCTGACGCCGTCGGACCTGCAGGCCTTCCGCAGTGGGGCCTCCCCTGCCAGCCTCGCCCGGACGCTGGGCTCCAAGT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000423191.6
ENST00000435864.2
CDS GCA 90 bp GATGAGCTGGGACTGGCTGAGGGCACTCATGTGGCTGGCCAGCATTaGCGGGCGACCCAGCAGGGGCCCGGGCCGGCCCGAGTCATAGGC +
Preference number: 5 (lower is better)
Translates to: DELGLAEGTHVAGQH*RATQQGPGPARVIG
Trigger: GCCTATGACTCGGGCCGGCCCGGGCCCCTGCTGGGTCGCCCGGCAATGCTGGCCAGCCACATGAGTGCCCTCAGCCAGTCCCAGCTCATC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000423191.6
ENST00000435864.2
CDS-3UTR CAA 90 bp CCGGCCCTCTGGCCCATGCATCTGGGGTGGGTGTCCGTTGGTAAGCGACCCCGCTGTGGCTGGCCAGCATaGCCGGGCGACCCAGCAGGG +
Preference number: 5 (lower is better)
Translates to: PALWPMHLGWVSVGKRPRCGWPA*PGDPAG
Trigger: CCCTGCTGGGTCGCCCGGCAATGCTGGCCAGCCACA...GCGGGGTCGCTTACCAACGGACACCCACCCCAGATGCATGGGCCAGAGGGCCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
CDS-3UTR CAA 90 bp GGCCGGCCCTCTGGCCCATGCATCTGGGGTGGGTGTCCGTTGGTAAGCGACCCCTGGGGTGGGTGTCCGTaGGTAAGCGACCCCGCCAGG +
Preference number: 5 (lower is better)
Translates to: GRPSGPCIWGGCPLVSDPWGGCP*VSDPAR
Trigger: CCTGGCGGGGTCGCTTACCAACGGACACCCACCCCA...GGGGTCGCTTACCAACGGACACCCACCCCAGATGCATGGGCCAGAGGGCCGGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000413823.1
CDS-3UTR CAA 90 bp CCCGGGCAATGGGTGTGTCACTGCTCTCTCCGATGGGCCACCCTGCCTCTGGCCTGGGGTGGGTGTCCGTaGGTAAGCGACCCCGCCAGG +
Preference number: 5 (lower is better)
Translates to: PGQWVCHCSLRWATLPLAWGGCP*VSDPAR
Trigger: CCTGGCGGGGTCGCTTACCAACGGACACCCACCCCA...GGCCAGAGGCAGGGTGGCCCATCGGAGAGAGCAGTGACACACCCATTGCCCGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
CDS-3UTR CAA 90 bp GGGTGGGTGTCCGTTGGTAAGCGACCCCGCCAGGGGCGGCCCACCTGGGCTGGGGCATACATGGGCTGCTaGGGTGGGAGCATTTTGGCT +
Preference number: 5 (lower is better)
Translates to: GWVSVGKRPRQGRPTWAGAYMGC*GGSILA
Trigger: AGCCAAAATGCTCCCACCCAAGCAGCCCATGTATGC...CCCAGCCCAGGTGGGCCGCCCCTGGCGGGGTCGCTTACCAACGGACACCCACCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
CDS-3UTR CAA 90 bp CCTTCAGGCTCTGAGCAGTGCCTTCCAGCGAGCCTCAGGGATGGTAGGGAGGCGCCTGGCAGCAGAGACTaGGAGCCCAGCGTCCGGGCG +
Preference number: 5 (lower is better)
Translates to: PSGSEQCLPASLRDGREAPGSRD*EPSVRA
Trigger: CGCCCGGACGCTGGGCTCCAAGTCTCTGCTGCCAGG...CGCCTCCCTACCATCCCTGAGGCTCGCTGGAAGGCACTGCTCAGAGCCTGAAGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000423191.6
CDS-3UTR CAA 90 bp GGTGGGTGTCCGTTGGTAAGCGACCCCGCCAGGGGCGGCCCACCTGGGCTGGGGGTTTGGCAGCCGCTTTaGTGCGCGTCTCCCTTAAGA +
Preference number: 5 (lower is better)
Translates to: GGCPLVSDPARGGPPGLGVWQPL*CASPLR
Trigger: TCTTAAGGGAGACGCGCACAAAAGCGGCTGCCAAAC...CCCCAGCCCAGGTGGGCCGCCCCTGGCGGGGTCGCTTACCAACGGACACCCACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000413823.1
CDS CCA 90 bp TGGGCGATGCTGCTCCGGATGCCCATCTGCGAGATGAGCTGGGACTaGCTGAGGGCACTCATGTGGCTGGCCAGCATTGCCGGGCGACCC +
Preference number: 5 (lower is better)
Translates to: WAMLLRMPICEMSWD*LRALMWLASIAGRP
Trigger: GGGTCGCCCGGCAATGCTGGCCAGCCACATGAGTGCCCTCAGCCAGTCCCAGCTCATCTCGCAGATGGGCATCCGGAGCAGCATCGCCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000423191.6
ENST00000435864.2
CDS-3UTR CAA 90 bp CTGGAGCAAGCAGGTCAGCGGGCGGAAGGTTCCTGCAGGTTCTTTGGGCTGGTGGAGGGGGTCGCTGACTaGCTCCCCGGCGGTGATGGG +
Preference number: 5 (lower is better)
Translates to: LEQAGQRAEGSCRFFGLVEGVAD*LPGGDG
Trigger: CCCATCACCGCCGGGGAGCAAGTCAGCGACCCCCTC...CACCAGCCCAAAGAACCTGCAGGAACCTTCCGCCCGCTGACCTGCTTGCTCCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
CDS-3UTR CAA 90 bp TCAGCCCTTCAGGCTCTGAGCAGTGCCTTCCAGCGAGCCTCAGGGATGGTAGGGGAGGGGGTCGCTGACTaGCTCCCCGGCGGTGATGGG +
Preference number: 5 (lower is better)
Translates to: SALQALSSAFQRASGMVGEGVAD*LPGGDG
Trigger: CCCATCACCGCCGGGGAGCAAGTCAGCGACCCCCTC...CCCTACCATCCCTGAGGCTCGCTGGAAGGCACTGCTCAGAGCCTGAAGGGCTGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000423191.6
CDS-3UTR CAA 90 bp CCGGCCCTCTGGCCCATGCATCTGGGGTGGGTGTCCGTTGGTAAGCGACCCCGCGAGTCTGGTGGGAGGTaGAGGAAGAGACTCAGCCCC +
Preference number: 5 (lower is better)
Translates to: PALWPMHLGWVSVGKRPRESGGR*RKRLSP
Trigger: GGGGCTGAGTCTCTTCCTCAACCTCCCACCAGACTC...GCGGGGTCGCTTACCAACGGACACCCACCCCAGATGCATGGGCCAGAGGGCCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000413823.1
CDS TCA 90 bp GGTCCATGGCCTGATAGGAGTAGGCAGGGAGCAGACCGTTGGGGGTaGGGCCGTGGCACAGCGAGTGGTAGCTGGCTTCGTGGTCCCCCA +
Preference number: 5 (lower is better)
Translates to: GPWPDRSRQGADRWG*GRGTASGSWLRGPP
Trigger: TGGGGGACCACGAAGCCAGCTACCACTCGCTGTGCCACGGCCTCACCCCCAACGGTCTGCTCCCTGCCTACTCCTATCAGGCCATGGACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000423191.6
CDS GCA 90 bp CTCTGGCAGAGCTCTCCACACGTTGCCTCCCGGCATCTGCTCAAGTaGAGAGACACCTGCCTCCCAGCACCAGGCAGAGGGCTGGGCAGG +
Preference number: 5 (lower is better)
Translates to: LWQSSPHVASRHLLK*RDTCLPAPGRGLGR
Trigger: CCTGCCCAGCCCTCTGCCTGGTGCTGGGAGGCAGGTGTCTCTGCACTTGAGCAGATGCCGGGAGGCAACGTGTGGAGAGCTCTGCCAGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435864.2
CDS CCA 90 bp GAGCTGTGGGCGATGCTGCTCCGGATGCCCATCTGCGAGATGAGCTaGGACTGGCTGAGGGCACTCATGTGGCTGGCCAGCATTGCCGGG +
Preference number: 5 (lower is better)
Translates to: ELWAMLLRMPICEMS*DWLRALMWLASIAG
Trigger: CCCGGCAATGCTGGCCAGCCACATGAGTGCCCTCAGCCAGTCCCAGCTCATCTCGCAGATGGGCATCCGGAGCAGCATCGCCCACAGCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000423191.6
ENST00000435864.2
CDS CCA 90 bp GCGGAAGGCCTGCAGGTCCGACGGCGTCAGGAAGGAGGCCAGGCCTaGCATGGCATACATGGGCTGCTTGGGTGGGAGCATTTTGGCTGG +
Preference number: 5 (lower is better)
Translates to: AEGLQVRRRQEGGQA*HGIHGLLGWEHFGW
Trigger: CCAGCCAAAATGCTCCCACCCAAGCAGCCCATGTATGCCATGCCAGGCCTGGCCTCCTTCCTGACGCCGTCGGACCTGCAGGCCTTCCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000423191.6
ENST00000435864.2
CDS-3UTR CAA 90 bp AGGTTGAGGAAGAGACTCAGCCCCCGGGCAATGGGTGTGTCACTGCTCTCTCCGTGTGGCTGGCCAGCATaGCCGGGCGACCCAGCAGGG +
Preference number: 5 (lower is better)
Translates to: RLRKRLSPRAMGVSLLSPCGWPA*PGDPAG
Trigger: CCCTGCTGGGTCGCCCGGCAATGCTGGCCAGCCACA...CGGAGAGAGCAGTGACACACCCATTGCCCGGGGGCTGAGTCTCTTCCTCAACCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000423191.6
CDS TCA 90 bp GCCTCCCAGCACCAGGCAGAGGGCTGGGCAGGCAGCCGGCACTCATaGGATGTCTGGGAACCAAGTGAAGCCAGCCTCCTGCTTCCCTCT +
Preference number: 5 (lower is better)
Translates to: ASQHQAEGWAGSRHS*DVWEPSEASLLLPS
Trigger: AGAGGGAAGCAGGAGGCTGGCTTCACTTGGTTCCCAGACATCTCATGAGTGCCGGCTGCCTGCCCAGCCCTCTGCCTGGTGCTGGGAGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435864.2
CDS CCA 90 bp AGGCCTGCAGGTCCGACGGCGTCAGGAAGGAGGCCAGGCCTGGCATaGCATACATGGGCTGCTTGGGTGGGAGCATTTTGGCTGGTGGGT +
Preference number: 5 (lower is better)
Translates to: RPAGPTASGRRPGLA*HTWAAWVGAFWLVG
Trigger: ACCCACCAGCCAAAATGCTCCCACCCAAGCAGCCCATGTATGCCATGCCAGGCCTGGCCTCCTTCCTGACGCCGTCGGACCTGCAGGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000423191.6
ENST00000435864.2
CDS-3UTR CAA 90 bp GGGGCCGGGTGTCCAGACATAGGGTACCGTGCGCAGGGCGAGGACAGGGTCCACTGTAGGTCTGGCTGGTaGACAGGAGCTCTGGGTTTC +
Preference number: 5 (lower is better)
Translates to: GAGCPDIGYRAQGEDRVHCRSGW*TGALGF
Trigger: GAAACCCAGAGCTCCTGTCAACCAGCCAGACCTACA...GTGGACCCTGTCCTCGCCCTGCGCACGGTACCCTATGTCTGGACACCCGGCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
CDS-3UTR CAA 90 bp TCCGGGGTGGCTAGCAAGCGTCCGGTCCTTGCTGTGAGGATGACGAAACGGTTTGAGGGGGTCGCTGACTaGCTCCCCGGCGGTGATGGG +
Preference number: 5 (lower is better)
Translates to: SGVASKRPVLAVRMTKRFEGVAD*LPGGDG
Trigger: CCCATCACCGCCGGGGAGCAAGTCAGCGACCCCCTC...AAACCGTTTCGTCATCCTCACAGCAAGGACCGGACGCTTGCTAGCCACCCCGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
CDS-3UTR CAA 90 bp GGGTGGGTGTCCGTTGGTAAGCGACCCCGCCAGGGGCGGCCCACCTGGGCTGGGTTTTCTCCCGAGATCTaGAAATGCACTTCCGACTCC +
Preference number: 5 (lower is better)
Translates to: GWVSVGKRPRQGRPTWAGFSPEI*KCTSDS
Trigger: GGAGTCGGAAGTGCATTTCAAGATCTCGGGAGAAAA...CCCAGCCCAGGTGGGCCGCCCCTGGCGGGGTCGCTTACCAACGGACACCCACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
CDS-3UTR CAA 90 bp CACAGTTACCCTGGAGCAAGCAGGTCAGCGGGCGGAAGGTTCCTGCAGGTTCTTCCTGGCAGCAGAGACTaGGAGCCCAGCGTCCGGGCG +
Preference number: 5 (lower is better)
Translates to: HSYPGASRSAGGRFLQVLPGSRD*EPSVRA
Trigger: CGCCCGGACGCTGGGCTCCAAGTCTCTGCTGCCAGG...AAGAACCTGCAGGAACCTTCCGCCCGCTGACCTGCTTGCTCCAGGGTAACTGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
CDS-3UTR CAA 90 bp TGTCCAGACATAGGGTACCGTGCGCAGGGCGAGGACAGGGTCCACAGTTACCCTTGGGGTGGGTGTCCGTaGGTAAGCGACCCCGCCAGG +
Preference number: 5 (lower is better)
Translates to: CPDIGYRAQGEDRVHSYPWGGCP*VSDPAR
Trigger: CCTGGCGGGGTCGCTTACCAACGGACACCCACCCCA...AGGGTAACTGTGGACCCTGTCCTCGCCCTGCGCACGGTACCCTATGTCTGGACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
CDS GCA 90 bp TTCCAAGCCTCTGGCAGAGCTCTCCACACGTTGCCTCCCGGCATCTaGTCAAGTGCAGAGACACCTGCCTCCCAGCACCAGGCAGAGGGC +
Preference number: 5 (lower is better)
Translates to: FQASGRALHTLPPGI*SSAETPASQHQAEG
Trigger: GCCCTCTGCCTGGTGCTGGGAGGCAGGTGTCTCTGCACTTGAGCAGATGCCGGGAGGCAACGTGTGGAGAGCTCTGCCAGAGGCTTGGAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435864.2
CDS CCA 90 bp GGTCCGACGGCGTCAGGAAGGAGGCCAGGCCTGGCATGGCATACATaGGCTGCTTGGGTGGGAGCATTTTGGCTGGTGGGTTTGCCTGAG +
Preference number: 5 (lower is better)
Translates to: GPTASGRRPGLAWHT*AAWVGAFWLVGLPE
Trigger: CTCAGGCAAACCCACCAGCCAAAATGCTCCCACCCAAGCAGCCCATGTATGCCATGCCAGGCCTGGCCTCCTTCCTGACGCCGTCGGACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000423191.6
ENST00000435864.2
CDS-3UTR CAA 90 bp CCCGGGCAATGGGTGTGTCACTGCTCTCTCCGATGGGCCACCCTGCCTCTGGCCTCCTGTGCTAGCATGTaGGACACCATGATGGCTGGG +
Preference number: 5 (lower is better)
Translates to: PGQWVCHCSLRWATLPLASCASM*DTMMAG
Trigger: CCCAGCCATCATGGTGTCCAACATGCTAGCACAGGA...GGCCAGAGGCAGGGTGGCCCATCGGAGAGAGCAGTGACACACCCATTGCCCGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000423191.6
CDS-3UTR CAA 90 bp CAAGACAGACACTCGCCAGGGCCAGGAAACAGCTGCAAACGACGTCAAGAACCCTGTGGCTGGCCAGCATaGCCGGGCGACCCAGCAGGG +
Preference number: 5 (lower is better)
Translates to: QDRHSPGPGNSCKRRQEPCGWPA*PGDPAG
Trigger: CCCTGCTGGGTCGCCCGGCAATGCTGGCCAGCCACA...GGGTTCTTGACGTCGTTTGCAGCTGTTTCCTGGCCCTGGCGAGTGTCTGTCTTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
CDS-3UTR CAA 90 bp CCCGGGCAATGGGTGTGTCACTGCTCTCTCCGATGGGCCACCCTGCCTCTGGCCGCTCTTGGTCTCACCTaGATCTGGGGAGCTCTTGGA +
Preference number: 5 (lower is better)
Translates to: PGQWVCHCSLRWATLPLAALGLT*IWGALG
Trigger: TCCAAGAGCTCCCCAGATCAAGGTGAGACCAAGAGC...GGCCAGAGGCAGGGTGGCCCATCGGAGAGAGCAGTGACACACCCATTGCCCGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341197.9
ENST00000372999.5
ENST00000423191.6
CDS-3UTR CAA 90 bp GGCCGGCCCTCTGGCCCATGCATCTGGGGTGGGTGTCCGTTGGTAAGCGACCCCTTTTGGCTGGTGGGTTaGCCTGAGTGCTCTTGGTCT +
Preference number: 5 (lower is better)
Translates to: GRPSGPCIWGGCPLVSDPFWLVG*PECSWS
Trigger: AGACCAAGAGCACTCAGGCAAACCCACCAGCCAAAA...GGGGTCGCTTACCAACGGACACCCACCCCAGATGCATGGGCCAGAGGGCCGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
CDS-3UTR CAA 90 bp TTGAGGAAGAGACTCAGCCCCCGGGCAATGGGTGTGTCACTGCTCTCTCCGATGCCGCTGCTGGTGGGGTaGGATGGGCCAGGTGAGCAG +
Preference number: 5 (lower is better)
Translates to: LRKRLSPRAMGVSLLSPMPLLVG*DGPGEQ
Trigger: CTGCTCACCTGGCCCATCCAACCCCACCAGCAGCGG...CATCGGAGAGAGCAGTGACACACCCATTGCCCGGGGGCTGAGTCTCTTCCTCAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000423191.6
CDS GCA 90 bp GGCCAGGGCCTCTTTTCTGCTGTCAGCCCTTCAGGCTCTGAGCAGTaGCTTCCAGCGAGCCTCAGGGATGGTAGGGAGGCGGGATTAGGT +
Preference number: 5 (lower is better)
Translates to: GQGLFSAVSPSGSEQ*LPASLRDGREAGLG
Trigger: ACCTAATCCCGCCTCCCTACCATCCCTGAGGCTCGCTGGAAGGCACTGCTCAGAGCCTGAAGGGCTGACAGCAGAAAAGAGGCCCTGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000413823.1
ENST00000423191.6
ENST00000435864.2
CDS CCA 90 bp GAGTGGACCATCTCCTGGATCGTGGGCAGCTGGCCCGACAGCAGGTaGCTGTCCTGTGCTAGCATGTTGGACACCATGATGGCTGGGAGG +
Preference number: 5 (lower is better)
Translates to: EWTISWIVGSWPDSR*LSCASMLDTMMAGR
Trigger: CCTCCCAGCCATCATGGTGTCCAACATGCTAGCACAGGACAGCCACCTGCTGTCGGGCCAGCTGCCCACGATCCAGGAGATGGTCCACTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000423191.6
CDS CCA 90 bp CCCTCTCCTGCTCCATCCTCTGGCCTCACCCTCTTTCCAAGCCTCTaGCAGAGCTCTCCACACGTTGCCTCCCGGCATCTGCTCAAGTGC +
Preference number: 5 (lower is better)
Translates to: PSPAPSSGLTLFPSL*QSSPHVASRHLLKC
Trigger: GCACTTGAGCAGATGCCGGGAGGCAACGTGTGGAGAGCTCTGCCAGAGGCTTGGAAAGAGGGTGAGGCCAGAGGATGGAGCAGGAGAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435864.2
CDS-3UTR CAA 90 bp GACAGACACTCGCCAGGGCCAGGAAACAGCTGCAAACGACGTCAAGAACCCAAAGCAGGGAGCAGACCGTaGGGGGTGAGGCCGTGGCAC +
Preference number: 5 (lower is better)
Translates to: DRHSPGPGNSCKRRQEPKAGSRP*GVRPWH
Trigger: GTGCCACGGCCTCACCCCCAACGGTCTGCTCCCTGC...TTTGGGTTCTTGACGTCGTTTGCAGCTGTTTCCTGGCCCTGGCGAGTGTCTGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
CDS-3UTR CAA 90 bp GACAGACACTCGCCAGGGCCAGGAAACAGCTGCAAACGACGTCAAGAACCCAAATGTGGCTGGCCAGCATaGCCGGGCGACCCAGCAGGG +
Preference number: 5 (lower is better)
Translates to: DRHSPGPGNSCKRRQEPKCGWPA*PGDPAG
Trigger: CCCTGCTGGGTCGCCCGGCAATGCTGGCCAGCCACA...TTTGGGTTCTTGACGTCGTTTGCAGCTGTTTCCTGGCCCTGGCGAGTGTCTGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
CDS-3UTR CAA 90 bp ACTCGCCAGGGCCAGGAAACAGCTGCAAACGACGTCAAGAACCCAAACCCAAACCCTGGCAGCAGAGACTaGGAGCCCAGCGTCCGGGCG +
Preference number: 5 (lower is better)
Translates to: TRQGQETAANDVKNPNPNPGSRD*EPSVRA
Trigger: CGCCCGGACGCTGGGCTCCAAGTCTCTGCTGCCAGG...GTTTGGGTTTGGGTTCTTGACGTCGTTTGCAGCTGTTTCCTGGCCCTGGCGAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
CDS TCA 90 bp GGCCCGACAGCAGGTGGCTGTCCTGTGCTAGCATGTTGGACACCATaGTGGCTGGGAGGTCCATGGCCTGATAGGAGTAGGCAGGGAGCA +
Preference number: 5 (lower is better)
Translates to: GPTAGGCPVLACWTP*WLGGPWPDRSRQGA
Trigger: TGCTCCCTGCCTACTCCTATCAGGCCATGGACCTCCCAGCCATCATGGTGTCCAACATGCTAGCACAGGACAGCCACCTGCTGTCGGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000423191.6
CDS CCA 90 bp GCGTCAGGAAGGAGGCCAGGCCTGGCATGGCATACATGGGCTGCTTaGGTGGGAGCATTTTGGCTGGTGGGTTTGCCTGAGTGCTCTTGG +
Preference number: 5 (lower is better)
Translates to: ASGRRPGLAWHTWAA*VGAFWLVGLPECSW
Trigger: CCAAGAGCACTCAGGCAAACCCACCAGCCAAAATGCTCCCACCCAAGCAGCCCATGTATGCCATGCCAGGCCTGGCCTCCTTCCTGACGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000423191.6
ENST00000435864.2
CDS-3UTR CAA 90 bp GGAGAGCAGTGCTCCGGGGTGGCTAGCAAGCGTCCGGTCCTTGCTGTGAGGATGTGTAGGTCTGGCTGGTaGACAGGAGCTCTGGGTTTC +
Preference number: 5 (lower is better)
Translates to: GEQCSGVASKRPVLAVRMCRSGW*TGALGF
Trigger: GAAACCCAGAGCTCCTGTCAACCAGCCAGACCTACA...CATCCTCACAGCAAGGACCGGACGCTTGCTAGCCACCCCGGAGCACTGCTCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
CDS-3UTR CAA 90 bp GGAGAGCAGTGCTCCGGGGTGGCTAGCAAGCGTCCGGTCCTTGCTGTGAGGATGTCCTGTGCTAGCATGTaGGACACCATGATGGCTGGG +
Preference number: 5 (lower is better)
Translates to: GEQCSGVASKRPVLAVRMSCASM*DTMMAG
Trigger: CCCAGCCATCATGGTGTCCAACATGCTAGCACAGGA...CATCCTCACAGCAAGGACCGGACGCTTGCTAGCCACCCCGGAGCACTGCTCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
CDS-3UTR CAA 90 bp CAGGGCCAGGAAACAGCTGCAAACGACGTCAAGAACCCAAACCCAAACGAAACCGAGGGGGTCGCTGACTaGCTCCCCGGCGGTGATGGG +
Preference number: 5 (lower is better)
Translates to: QGQETAANDVKNPNPNETEGVAD*LPGGDG
Trigger: CCCATCACCGCCGGGGAGCAAGTCAGCGACCCCCTC...GGTTTCGTTTGGGTTTGGGTTCTTGACGTCGTTTGCAGCTGTTTCCTGGCCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
CDS-3UTR CAA 90 bp GGCCGGCCCTCTGGCCCATGCATCTGGGGTGGGTGTCCGTTGGTAAGCGACCCCTTTTCTCCCGAGATCTaGAAATGCACTTCCGACTCC +
Preference number: 5 (lower is better)
Translates to: GRPSGPCIWGGCPLVSDPFSPEI*KCTSDS
Trigger: GGAGTCGGAAGTGCATTTCAAGATCTCGGGAGAAAA...GGGGTCGCTTACCAACGGACACCCACCCCAGATGCATGGGCCAGAGGGCCGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
CDS-3UTR CAA 90 bp TGCTGTGAGGATGACGAAACGGTTTGGCAGCCGCTTTTGTGCGCGTCTCCCTTACCGCTGCTGGTGGGGTaGGATGGGCCAGGTGAGCAG +
Preference number: 5 (lower is better)
Translates to: CCEDDETVWQPLLCASPLPLLVG*DGPGEQ
Trigger: CTGCTCACCTGGCCCATCCAACCCCACCAGCAGCGG...TAAGGGAGACGCGCACAAAAGCGGCTGCCAAACCGTTTCGTCATCCTCACAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000413823.1
CDS-3UTR CAA 90 bp GAGGTTGAGGAAGAGACTCAGCCCCCGGGCAATGGGTGTGTCACTGCTCTCTCCGAGTCTGGTGGGAGGTaGAGGAAGAGACTCAGCCCC +
Preference number: 5 (lower is better)
Translates to: EVEEETQPPGNGCVTALSESGGR*RKRLSP
Trigger: GGGGCTGAGTCTCTTCCTCAACCTCCCACCAGACTC...GGAGAGAGCAGTGACACACCCATTGCCCGGGGGCTGAGTCTCTTCCTCAACCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000423191.6
CDS-3UTR CAA 90 bp CCTTCAGGCTCTGAGCAGTGCCTTCCAGCGAGCCTCAGGGATGGTAGGGAGGCGGTTTGGCAGCCGCTTTaGTGCGCGTCTCCCTTAAGA +
Preference number: 5 (lower is better)
Translates to: PSGSEQCLPASLRDGREAVWQPL*CASPLR
Trigger: TCTTAAGGGAGACGCGCACAAAAGCGGCTGCCAAAC...CGCCTCCCTACCATCCCTGAGGCTCGCTGGAAGGCACTGCTCAGAGCCTGAAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
CDS CCA 90 bp CAGGAAGGAGGCCAGGCCTGGCATGGCATACATGGGCTGCTTGGGTaGGAGCATTTTGGCTGGTGGGTTTGCCTGAGTGCTCTTGGTCTC +
Preference number: 5 (lower is better)
Translates to: QEGGQAWHGIHGLLG*EHFGWWVCLSALGL
Trigger: GAGACCAAGAGCACTCAGGCAAACCCACCAGCCAAAATGCTCCCACCCAAGCAGCCCATGTATGCCATGCCAGGCCTGGCCTCCTTCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000423191.6
ENST00000435864.2
CDS-3UTR CAA 90 bp GGAGCAAGCAGGTCAGCGGGCGGAAGGTTCCTGCAGGTTCTTTGGGCTGGTGGTTGTAGGTCTGGCTGGTaGACAGGAGCTCTGGGTTTC +
Preference number: 5 (lower is better)
Translates to: GASRSAGGRFLQVLWAGGCRSGW*TGALGF
Trigger: GAAACCCAGAGCTCCTGTCAACCAGCCAGACCTACA...ACCACCAGCCCAAAGAACCTGCAGGAACCTTCCGCCCGCTGACCTGCTTGCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
CDS-3UTR CAA 90 bp TCAGCCCTTCAGGCTCTGAGCAGTGCCTTCCAGCGAGCCTCAGGGATGGTAGGGTGTAGGTCTGGCTGGTaGACAGGAGCTCTGGGTTTC +
Preference number: 5 (lower is better)
Translates to: SALQALSSAFQRASGMVGCRSGW*TGALGF
Trigger: GAAACCCAGAGCTCCTGTCAACCAGCCAGACCTACA...CCCTACCATCCCTGAGGCTCGCTGGAAGGCACTGCTCAGAGCCTGAAGGGCTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000423191.6
CDS-3UTR CAA 90 bp GGAGCAAGCAGGTCAGCGGGCGGAAGGTTCCTGCAGGTTCTTTGGGCTGGTGGTGCTCTTGGTCTCACCTaGATCTGGGGAGCTCTTGGA +
Preference number: 5 (lower is better)
Translates to: GASRSAGGRFLQVLWAGGALGLT*IWGALG
Trigger: TCCAAGAGCTCCCCAGATCAAGGTGAGACCAAGAGC...ACCACCAGCCCAAAGAACCTGCAGGAACCTTCCGCCCGCTGACCTGCTTGCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341197.9
ENST00000372999.5
CDS-3UTR CAA 90 bp CTGGAGCAAGCAGGTCAGCGGGCGGAAGGTTCCTGCAGGTTCTTTGGGCTGGTGGCTCTTGGTCTCACCTaGATCTGGGGAGCTCTTGGA +
Preference number: 5 (lower is better)
Translates to: LEQAGQRAEGSCRFFGLVALGLT*IWGALG
Trigger: TCCAAGAGCTCCCCAGATCAAGGTGAGACCAAGAGC...CACCAGCCCAAAGAACCTGCAGGAACCTTCCGCCCGCTGACCTGCTTGCTCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341197.9
ENST00000372999.5
CDS GCA 90 bp TGGGCTGCTTGGGTGGGAGCATTTTGGCTGGTGGGTTTGCCTGAGTaGTCTTGGTCTCACCTTGATCTGGGGAGCTCTTGGAGACGAGGC +
Preference number: 5 (lower is better)
Translates to: WAAWVGAFWLVGLPE*SWSHLDLGSSWRRG
Trigger: GCCTCGTCTCCAAGAGCTCCCCAGATCAAGGTGAGACCAAGAGCACTCAGGCAAACCCACCAGCCAAAATGCTCCCACCCAAGCAGCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000372999.5
ENST00000423191.6
ENST00000435864.2
CDS-3UTR CAA 90 bp CAGTGCTCCGGGGTGGCTAGCAAGCGTCCGGTCCTTGCTGTGAGGATGACGAAAGCATACATGGGCTGCTaGGGTGGGAGCATTTTGGCT +
Preference number: 5 (lower is better)
Translates to: QCSGVASKRPVLAVRMTKAYMGC*GGSILA
Trigger: AGCCAAAATGCTCCCACCCAAGCAGCCCATGTATGC...TTTCGTCATCCTCACAGCAAGGACCGGACGCTTGCTAGCCACCCCGGAGCACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
CDS-3UTR CAA 90 bp TTTGAGAGAAGCACTGGGCACCAAGACAGACACTCGCCAGGGCCAGGAAACAGCGAGTCTGGTGGGAGGTaGAGGAAGAGACTCAGCCCC +
Preference number: 5 (lower is better)
Translates to: FERSTGHQDRHSPGPGNSESGGR*RKRLSP
Trigger: GGGGCTGAGTCTCTTCCTCAACCTCCCACCAGACTC...GCTGTTTCCTGGCCCTGGCGAGTGTCTGTCTTGGTGCCCAGTGCTTCTCTCAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000413823.1
CDS-3UTR CAA 90 bp TGTCCAGACATAGGGTACCGTGCGCAGGGCGAGGACAGGGTCCACAGTTACCCTGTTTGGCAGCCGCTTTaGTGCGCGTCTCCCTTAAGA +
Preference number: 5 (lower is better)
Translates to: CPDIGYRAQGEDRVHSYPVWQPL*CASPLR
Trigger: TCTTAAGGGAGACGCGCACAAAAGCGGCTGCCAAAC...AGGGTAACTGTGGACCCTGTCCTCGCCCTGCGCACGGTACCCTATGTCTGGACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
CDS CCA 90 bp GCCTGGCATGGCATACATGGGCTGCTTGGGTGGGAGCATTTTGGCTaGTGGGTTTGCCTGAGTGCTCTTGGTCTCACCTTGATCTGGGGA +
Preference number: 5 (lower is better)
Translates to: AWHGIHGLLGWEHFG*WVCLSALGLTLIWG
Trigger: TCCCCAGATCAAGGTGAGACCAAGAGCACTCAGGCAAACCCACCAGCCAAAATGCTCCCACCCAAGCAGCCCATGTATGCCATGCCAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000423191.6
ENST00000435864.2
CDS CCA 90 bp CCAGGCCTGGCATGGCATACATGGGCTGCTTGGGTGGGAGCATTTTaGCTGGTGGGTTTGCCTGAGTGCTCTTGGTCTCACCTTGATCTG +
Preference number: 5 (lower is better)
Translates to: PGLAWHTWAAWVGAF*LVGLPECSWSHLDL
Trigger: CAGATCAAGGTGAGACCAAGAGCACTCAGGCAAACCCACCAGCCAAAATGCTCCCACCCAAGCAGCCCATGTATGCCATGCCAGGCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000423191.6
ENST00000435864.2
CDS-3UTR CAA 90 bp AGGTTGAGGAAGAGACTCAGCCCCCGGGCAATGGGTGTGTCACTGCTCTCTCCGGGCTTCTGCGGCTCATaGGGGTCCTTCTTTTTCTTC +
Preference number: 5 (lower is better)
Translates to: RLRKRLSPRAMGVSLLSPGFCGS*GSFFFF
Trigger: GAAGAAAAAGAAGGACCCCAATGAGCCGCAGAAGCC...CGGAGAGAGCAGTGACACACCCATTGCCCGGGGGCTGAGTCTCTTCCTCAACCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000423191.6
CDS-3UTR CAA 90 bp TTGAGGAAGAGACTCAGCCCCCGGGCAATGGGTGTGTCACTGCTCTCTCCGATGGCATACATGGGCTGCTaGGGTGGGAGCATTTTGGCT +
Preference number: 5 (lower is better)
Translates to: LRKRLSPRAMGVSLLSPMAYMGC*GGSILA
Trigger: AGCCAAAATGCTCCCACCCAAGCAGCCCATGTATGC...CATCGGAGAGAGCAGTGACACACCCATTGCCCGGGGGCTGAGTCTCTTCCTCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000423191.6
CDS GCA 90 bp GGCATACATGGGCTGCTTGGGTGGGAGCATTTTGGCTGGTGGGTTTaGCTGAGTGCTCTTGGTCTCACCTTGATCTGGGGAGCTCTTGGA +
Preference number: 5 (lower is better)
Translates to: GIHGLLGWEHFGWWV*LSALGLTLIWGALG
Trigger: TCCAAGAGCTCCCCAGATCAAGGTGAGACCAAGAGCACTCAGGCAAACCCACCAGCCAAAATGCTCCCACCCAAGCAGCCCATGTATGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000372999.5
ENST00000423191.6
ENST00000435864.2
CDS GCA 90 bp TGGGCTGCTTGGGTGGGAGCATTTTGGCTGGTGGGTTTGCCTGAGTaGTCTTGGTCTCACCTTGATCTGGGGAGCTCTGCTTCTGTTCCT +
Preference number: 5 (lower is better)
Translates to: WAAWVGAFWLVGLPE*SWSHLDLGSSASVP
Trigger: AGGAACAGAAGCAGAGCTCCCCAGATCAAGGTGAGACCAAGAGCACTCAGGCAAACCCACCAGCCAAAATGCTCCCACCCAAGCAGCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358131.5
CDS GCA 90 bp GGCATACATGGGCTGCTTGGGTGGGAGCATTTTGGCTGGTGGGTTTaGCTGAGTGCTCTTGGTCTCACCTTGATCTGGGGAGCTCTGCTT +
Preference number: 5 (lower is better)
Translates to: GIHGLLGWEHFGWWV*LSALGLTLIWGALL
Trigger: AAGCAGAGCTCCCCAGATCAAGGTGAGACCAAGAGCACTCAGGCAAACCCACCAGCCAAAATGCTCCCACCCAAGCAGCCCATGTATGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358131.5
CDS CCA 90 bp TGGCATGGCATACATGGGCTGCTTGGGTGGGAGCATTTTGGCTGGTaGGTTTGCCTGAGTGCTCTTGGTCTCACCTTGATCTGGGGAGCT +
Preference number: 5 (lower is better)
Translates to: WHGIHGLLGWEHFGW*VCLSALGLTLIWGA
Trigger: AGCTCCCCAGATCAAGGTGAGACCAAGAGCACTCAGGCAAACCCACCAGCCAAAATGCTCCCACCCAAGCAGCCCATGTATGCCATGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000423191.6
ENST00000435864.2
CDS-3UTR CAA 90 bp AGACACTCGCCAGGGCCAGGAAACAGCTGCAAACGACGTCAAGAACCCAAACCCTCCTGTGCTAGCATGTaGGACACCATGATGGCTGGG +
Preference number: 5 (lower is better)
Translates to: RHSPGPGNSCKRRQEPKPSCASM*DTMMAG
Trigger: CCCAGCCATCATGGTGTCCAACATGCTAGCACAGGA...GGGTTTGGGTTCTTGACGTCGTTTGCAGCTGTTTCCTGGCCCTGGCGAGTGTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
CDS-3UTR CAA 90 bp TCAGCCCTTCAGGCTCTGAGCAGTGCCTTCCAGCGAGCCTCAGGGATGGTAGGGTTTTCTCCCGAGATCTaGAAATGCACTTCCGACTCC +
Preference number: 5 (lower is better)
Translates to: SALQALSSAFQRASGMVGFSPEI*KCTSDS
Trigger: GGAGTCGGAAGTGCATTTCAAGATCTCGGGAGAAAA...CCCTACCATCCCTGAGGCTCGCTGGAAGGCACTGCTCAGAGCCTGAAGGGCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000423191.6
CDS-3UTR CAA 90 bp TCCGGGGTGGCTAGCAAGCGTCCGGTCCTTGCTGTGAGGATGACGAAACGGTTTTTTTGGCTGGTGGGTTaGCCTGAGTGCTCTTGGTCT +
Preference number: 5 (lower is better)
Translates to: SGVASKRPVLAVRMTKRFFWLVG*PECSWS
Trigger: AGACCAAGAGCACTCAGGCAAACCCACCAGCCAAAA...AAACCGTTTCGTCATCCTCACAGCAAGGACCGGACGCTTGCTAGCCACCCCGGA
57% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
CDS-3UTR CAA 90 bp TTGAGGAAGAGACTCAGCCCCCGGGCAATGGGTGTGTCACTGCTCTCTCCGATGTTTTGGCTGGTGGGTTaGCCTGAGTGCTCTTGGTCT +
Preference number: 5 (lower is better)
Translates to: LRKRLSPRAMGVSLLSPMFWLVG*PECSWS
Trigger: AGACCAAGAGCACTCAGGCAAACCCACCAGCCAAAA...CATCGGAGAGAGCAGTGACACACCCATTGCCCGGGGGCTGAGTCTCTTCCTCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000423191.6
CDS-3UTR CAA 90 bp CAGGGCCAGGAAACAGCTGCAAACGACGTCAAGAACCCAAACCCAAACGAAACCGAGTCTGGTGGGAGGTaGAGGAAGAGACTCAGCCCC +
Preference number: 5 (lower is better)
Translates to: QGQETAANDVKNPNPNETESGGR*RKRLSP
Trigger: GGGGCTGAGTCTCTTCCTCAACCTCCCACCAGACTC...GGTTTCGTTTGGGTTTGGGTTCTTGACGTCGTTTGCAGCTGTTTCCTGGCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000413823.1
CDS-3UTR CAA 90 bp CTCGCCAGGGCCAGGAAACAGCTGCAAACGACGTCAAGAACCCAAACCCAAACGGCTCTTGGTCTCACCTaGATCTGGGGAGCTCTGCTT +
Preference number: 5 (lower is better)
Translates to: LARARKQLQTTSRTQTQTALGLT*IWGALL
Trigger: AAGCAGAGCTCCCCAGATCAAGGTGAGACCAAGAGC...CGTTTGGGTTTGGGTTCTTGACGTCGTTTGCAGCTGTTTCCTGGCCCTGGCGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358131.5
CDS-3UTR CAA 90 bp TGCTGTGAGGATGACGAAACGGTTTGGCAGCCGCTTTTGTGCGCGTCTCCCTTATCCTGTGCTAGCATGTaGGACACCATGATGGCTGGG +
Preference number: 5 (lower is better)
Translates to: CCEDDETVWQPLLCASPLSCASM*DTMMAG
Trigger: CCCAGCCATCATGGTGTCCAACATGCTAGCACAGGA...TAAGGGAGACGCGCACAAAAGCGGCTGCCAAACCGTTTCGTCATCCTCACAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
CDS-3UTR CAA 90 bp AGACACTCGCCAGGGCCAGGAAACAGCTGCAAACGACGTCAAGAACCCAAACCCTTTTGGCTGGTGGGTTaGCCTGAGTGCTCTTGGTCT +
Preference number: 5 (lower is better)
Translates to: RHSPGPGNSCKRRQEPKPFWLVG*PECSWS
Trigger: AGACCAAGAGCACTCAGGCAAACCCACCAGCCAAAA...GGGTTTGGGTTCTTGACGTCGTTTGCAGCTGTTTCCTGGCCCTGGCGAGTGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
CDS-3UTR CAA 90 bp ACTCGCCAGGGCCAGGAAACAGCTGCAAACGACGTCAAGAACCCAAACCCAAACGCATACATGGGCTGCTaGGGTGGGAGCATTTTGGCT +
Preference number: 5 (lower is better)
Translates to: TRQGQETAANDVKNPNPNAYMGC*GGSILA
Trigger: AGCCAAAATGCTCCCACCCAAGCAGCCCATGTATGC...GTTTGGGTTTGGGTTCTTGACGTCGTTTGCAGCTGTTTCCTGGCCCTGGCGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
CDS-3UTR CAA 90 bp TGCTGTGAGGATGACGAAACGGTTTGGCAGCCGCTTTTGTGCGCGTCTCCCTTAGGCTTCTGCGGCTCATaGGGGTCCTTCTTTTTCTTC +
Preference number: 5 (lower is better)
Translates to: CCEDDETVWQPLLCASPLGFCGS*GSFFFF
Trigger: GAAGAAAAAGAAGGACCCCAATGAGCCGCAGAAGCC...TAAGGGAGACGCGCACAAAAGCGGCTGCCAAACCGTTTCGTCATCCTCACAGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000413823.1
CDS-3UTR CAA 90 bp CACTCGCCAGGGCCAGGAAACAGCTGCAAACGACGTCAAGAACCCAAACCCAAAATCTCCTATTCCAATTaGGGCCTGCGTGTTCGGAGC +
Preference number: 5 (lower is better)
Translates to: HSPGPGNSCKRRQEPKPKISYSN*GLRVRS
Trigger: GCTCCGAACACGCAGGCCCAAATTGGAATAGGAGAT...TTTGGGTTTGGGTTCTTGACGTCGTTTGCAGCTGTTTCCTGGCCCTGGCGAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358131.5
CDS-3UTR CAA 90 bp CAGGGCCAGGAAACAGCTGCAAACGACGTCAAGAACCCAAACCCAAACGAAACCGGCTTCTGCGGCTCATaGGGGTCCTTCTTTTTCTTC +
Preference number: 5 (lower is better)
Translates to: QGQETAANDVKNPNPNETGFCGS*GSFFFF
Trigger: GAAGAAAAAGAAGGACCCCAATGAGCCGCAGAAGCC...GGTTTCGTTTGGGTTTGGGTTCTTGACGTCGTTTGCAGCTGTTTCCTGGCCCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000413823.1
CDS-3UTR CAA 90 bp TCAGCCCTTCAGGCTCTGAGCAGTGCCTTCCAGCGAGCCTCAGGGATGGTAGGGAGGTTTCGTAATCTTTaGTTCACACTGGAAAACCGA +
Preference number: 5 (lower is better)
Translates to: SALQALSSAFQRASGMVGRFRNL*FTLENR
Trigger: TCGGTTTTCCAGTGTGAACAAAAGATTACGAAACCT...CCCTACCATCCCTGAGGCTCGCTGGAAGGCACTGCTCAGAGCCTGAAGGGCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
CDS GCA 90 bp CGTAGGCACTGTCACCATCAAACTTCTGCGGAAACACACCTGCAATaGACCAGTGTCTTGCAAGTAGAAGGAGCCCGAGTCTCATTCCAC +
Preference number: 5 (lower is better)
Translates to: RRHCHHQTSAETHLQ*TSVLQVEGARVSFH
Trigger: GTGGAATGAGACTCGGGCTCCTTCTACTTGCAAGACACTGGTGCATTGCAGGTGTGTTTCCGCAGAAGTTTGATGGTGACAGTGCCTACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358131.5
CDS-3UTR CAA 90 bp AGTTTTATTATAAAGAGATTTGAGAGAAGCACTGGGCACCAAGACAGACACTCGCCGCTGCTGGTGGGGTaGGATGGGCCAGGTGAGCAG +
Preference number: 5 (lower is better)
Translates to: SFIIKRFERSTGHQDRHSPLLVG*DGPGEQ
Trigger: CTGCTCACCTGGCCCATCCAACCCCACCAGCAGCGG...CGAGTGTCTGTCTTGGTGCCCAGTGCTTCTCTCAAATCTCTTTATAATAAAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000413823.1
CDS-3UTR CAA 90 bp CACTGGGCACCAAGACAGACACTCGCCAGGGCCAGGAAACAGCTGCAAACGACGAGGTTTCGTAATCTTTaGTTCACACTGGAAAACCGA +
Preference number: 5 (lower is better)
Translates to: HWAPRQTLARARKQLQTTRFRNL*FTLENR
Trigger: TCGGTTTTCCAGTGTGAACAAAAGATTACGAAACCT...CGTCGTTTGCAGCTGTTTCCTGGCCCTGGCGAGTGTCTGTCTTGGTGCCCAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000413823.1
CDS-3UTR CAA 90 bp AAAACACGTAGTCAACTACTTACACGGAACCAACAGTTTCTAGGTTTCGTAATCCCGCTGCTGGTGGGGTaGGATGGGCCAGGTGAGCAG +
Preference number: 5 (lower is better)
Translates to: KTRSQLLTRNQQFLGFVIPLLVG*DGPGEQ
Trigger: CTGCTCACCTGGCCCATCCAACCCCACCAGCAGCGG...GATTACGAAACCTAGAAACTGTTGGTTCCGTGTAAGTAGTTGACTACGTGTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000413823.1
CDS-3UTR CAA 90 bp CAGACACTCGCCAGGGCCAGGAAACAGCTGCAAACGACGTCAAGAACCCAAACCAGGTTTCGTAATCTTTaGTTCACACTGGAAAACCGA +
Preference number: 5 (lower is better)
Translates to: QTLARARKQLQTTSRTQTRFRNL*FTLENR
Trigger: TCGGTTTTCCAGTGTGAACAAAAGATTACGAAACCT...GGTTTGGGTTCTTGACGTCGTTTGCAGCTGTTTCCTGGCCCTGGCGAGTGTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000413823.1
CDS-3UTR CAA 90 bp GACACTCGCCAGGGCCAGGAAACAGCTGCAAACGACGTCAAGAACCCAAACCCAAGGTTTCGTAATCTTTaGTTCACACTGGAAAACCGA +
Preference number: 5 (lower is better)
Translates to: DTRQGQETAANDVKNPNPRFRNL*FTLENR
Trigger: TCGGTTTTCCAGTGTGAACAAAAGATTACGAAACCT...TGGGTTTGGGTTCTTGACGTCGTTTGCAGCTGTTTCCTGGCCCTGGCGAGTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000413823.1
CDS-3UTR CAA 90 bp GTCTTCAGCACAGTTCTAAAACACGTAGTCAACTACTTACACGGAACCAACAGTACTCTTGGTCCTCTATaGGCTGGAGGCCCAGCACCC +
Preference number: 5 (lower is better)
Translates to: VFSTVLKHVVNYLHGTNSTLGPL*AGGPAP
Trigger: GGGTGCTGGGCCTCCAGCCAATAGAGGACCAAGAGT...ACTGTTGGTTCCGTGTAAGTAGTTGACTACGTGTTTTAGAACTGTGCTGAAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358131.5
CDS-3UTR CAA 90 bp AGTTTTATTATAAAGAGATTTGAGAGAAGCACTGGGCACCAAGACAGACACTCGGTTTGGCAGCCGCTTTaGTGCGCGTCTCCCTTAAGA +
Preference number: 5 (lower is better)
Translates to: SFIIKRFERSTGHQDRHSVWQPL*CASPLR
Trigger: TCTTAAGGGAGACGCGCACAAAAGCGGCTGCCAAAC...CGAGTGTCTGTCTTGGTGCCCAGTGCTTCTCTCAAATCTCTTTATAATAAAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000413823.1
CDS-3UTR CAA 90 bp GTCTTCAGCACAGTTCTAAAACACGTAGTCAACTACTTACACGGAACCAACAGTCAATGCACCAGTGTCTaGCAAGTAGAAGGAGCCCGA +
Preference number: 5 (lower is better)
Translates to: VFSTVLKHVVNYLHGTNSQCTSV*QVEGAR
Trigger: TCGGGCTCCTTCTACTTGCAAGACACTGGTGCATTG...ACTGTTGGTTCCGTGTAAGTAGTTGACTACGTGTTTTAGAACTGTGCTGAAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358131.5
CDS-3UTR CAA 90 bp AGTTTTATTATAAAGAGATTTGAGAGAAGCACTGGGCACCAAGACAGACACTCGGGCTTCTGCGGCTCATaGGGGTCCTTCTTTTTCTTC +
Preference number: 5 (lower is better)
Translates to: SFIIKRFERSTGHQDRHSGFCGS*GSFFFF
Trigger: GAAGAAAAAGAAGGACCCCAATGAGCCGCAGAAGCC...CGAGTGTCTGTCTTGGTGCCCAGTGCTTCTCTCAAATCTCTTTATAATAAAACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000413823.1
CDS GCA 72 bp GGACTGGCTGAGGGCACTCATGTGGCTGGCCAGCATTaGCGGGCGACCCAGCAGGGGCCCGGGCCGGCCCGA +
Preference number: 6 (lower is better)
Translates to: GLAEGTHVAGQH*RATQQGPGPAR
Trigger: TCGGGCCGGCCCGGGCCCCTGCTGGGTCGCCCGGCAATGCTGGCCAGCCACATGAGTGCCCTCAGCCAGTCC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000423191.6
ENST00000435864.2
CDS CCA 72 bp TGCGAGATGAGCTGGGACTGGCTGAGGGCACTCATGTaGCTGGCCAGCATTGCCGGGCGACCCAGCAGGGGC +
Preference number: 6 (lower is better)
Translates to: CEMSWDWLRALM*LASIAGRPSRG
Trigger: GCCCCTGCTGGGTCGCCCGGCAATGCTGGCCAGCCACATGAGTGCCCTCAGCCAGTCCCAGCTCATCTCGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000423191.6
ENST00000435864.2
CDS CCA 72 bp GGTAGCTGCTGTCCCAGTCCCCGCTGCTGGTGGGGTTaGATGGGCCAGGTGAGCAGGATCCCGAGCTGCTGG +
Preference number: 6 (lower is better)
Translates to: GSCCPSPRCWWG*MGQVSRIPSCW
Trigger: CCAGCAGCTCGGGATCCTGCTCACCTGGCCCATCCAACCCCACCAGCAGCGGGGACTGGGACAGCAGCTACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000413823.1
ENST00000423191.6
ENST00000435864.2
CDS CCA 72 bp GTCGCTGACTTGCTCCCCGGCGGTGATGGGGAGCTGTaGGCGATGCTGCTCCGGATGCCCATCTGCGAGATG +
Preference number: 6 (lower is better)
Translates to: VADLLPGGDGEL*AMLLRMPICEM
Trigger: CATCTCGCAGATGGGCATCCGGAGCAGCATCGCCCACAGCTCCCCATCACCGCCGGGGAGCAAGTCAGCGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000423191.6
ENST00000435864.2
CDS CCA 72 bp GCGATGCTGCTCCGGATGCCCATCTGCGAGATGAGCTaGGACTGGCTGAGGGCACTCATGTGGCTGGCCAGC +
Preference number: 6 (lower is better)
Translates to: AMLLRMPICEMS*DWLRALMWLAS
Trigger: GCTGGCCAGCCACATGAGTGCCCTCAGCCAGTCCCAGCTCATCTCGCAGATGGGCATCCGGAGCAGCATCGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000423191.6
ENST00000435864.2
CDS CCA 72 bp CTGCAGGTCCGACGGCGTCAGGAAGGAGGCCAGGCCTaGCATGGCATACATGGGCTGCTTGGGTGGGAGCAT +
Preference number: 6 (lower is better)
Translates to: LQVRRRQEGGQA*HGIHGLLGWEH
Trigger: ATGCTCCCACCCAAGCAGCCCATGTATGCCATGCCAGGCCTGGCCTCCTTCCTGACGCCGTCGGACCTGCAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000423191.6
ENST00000435864.2
CDS TCA 72 bp CCTGATAGGAGTAGGCAGGGAGCAGACCGTTGGGGGTaGGGCCGTGGCACAGCGAGTGGTAGCTGGCTTCGT +
Preference number: 6 (lower is better)
Translates to: PDRSRQGADRWG*GRGTASGSWLR
Trigger: ACGAAGCCAGCTACCACTCGCTGTGCCACGGCCTCACCCCCAACGGTCTGCTCCCTGCCTACTCCTATCAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000423191.6
CDS TCA 72 bp CACCAGGCAGAGGGCTGGGCAGGCAGCCGGCACTCATaGGATGTCTGGGAACCAAGTGAAGCCAGCCTCCTG +
Preference number: 6 (lower is better)
Translates to: HQAEGWAGSRHS*DVWEPSEASLL
Trigger: CAGGAGGCTGGCTTCACTTGGTTCCCAGACATCTCATGAGTGCCGGCTGCCTGCCCAGCCCTCTGCCTGGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435864.2
CDS GCA 72 bp AGCTCTCCACACGTTGCCTCCCGGCATCTGCTCAAGTaGAGAGACACCTGCCTCCCAGCACCAGGCAGAGGG +
Preference number: 6 (lower is better)
Translates to: SSPHVASRHLLK*RDTCLPAPGRG
Trigger: CCCTCTGCCTGGTGCTGGGAGGCAGGTGTCTCTGCACTTGAGCAGATGCCGGGAGGCAACGTGTGGAGAGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435864.2
CDS GCA 72 bp TCTGGCAGAGCTCTCCACACGTTGCCTCCCGGCATCTaGTCAAGTGCAGAGACACCTGCCTCCCAGCACCAG +
Preference number: 6 (lower is better)
Translates to: SGRALHTLPPGI*SSAETPASQHQ
Trigger: CTGGTGCTGGGAGGCAGGTGTCTCTGCACTTGAGCAGATGCCGGGAGGCAACGTGTGGAGAGCTCTGCCAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435864.2
CDS CCA 72 bp GCTCCATCCTCTGGCCTCACCCTCTTTCCAAGCCTCTaGCAGAGCTCTCCACACGTTGCCTCCCGGCATCTG +
Preference number: 6 (lower is better)
Translates to: APSSGLTLFPSL*QSSPHVASRHL
Trigger: CAGATGCCGGGAGGCAACGTGTGGAGAGCTCTGCCAGAGGCTTGGAAAGAGGGTGAGGCCAGAGGATGGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435864.2
CDS GCA 72 bp AGGAAGGAGGCCAGGCCTGGCATGGCATACATGGGCTaGTTGGGTGGGAGCATTTTGGCTGGTGGGTTTGCC +
Preference number: 6 (lower is better)
Translates to: RKEARPGMAYMG*LGGSILAGGFA
Trigger: GGCAAACCCACCAGCCAAAATGCTCCCACCCAAGCAGCCCATGTATGCCATGCCAGGCCTGGCCTCCTTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000423191.6
ENST00000435864.2
CDS CAA 72 bp GGCTGGTGGGTTTGCCTGAGTGCTCTTGGTCTCACCTaGATCTGGGGAGCTCTTGGAGACGAGGCTAGCCCG +
Preference number: 6 (lower is better)
Translates to: GWWVCLSALGLT*IWGALGDEASP
Trigger: CGGGCTAGCCTCGTCTCCAAGAGCTCCCCAGATCAAGGTGAGACCAAGAGCACTCAGGCAAACCCACCAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000372999.5
ENST00000423191.6
ENST00000435864.2
CDS GCA 72 bp CCTCTTTCCAAGCCTCTGGCAGAGCTCTCCACACGTTaGCTCCCGGCATCTGCTCAAGTGCAGAGACACCTG +
Preference number: 6 (lower is better)
Translates to: PLSKPLAELSTR*LPASAQVQRHL
Trigger: CAGGTGTCTCTGCACTTGAGCAGATGCCGGGAGGCAACGTGTGGAGAGCTCTGCCAGAGGCTTGGAAAGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435864.2
CDS CAA 72 bp CCCTCTTTCCAAGCCTCTGGCAGAGCTCTCCACACGTaGCCTCCCGGCATCTGCTCAAGTGCAGAGACACCT +
Preference number: 6 (lower is better)
Translates to: PSFQASGRALHT*PPGICSSAETP
Trigger: AGGTGTCTCTGCACTTGAGCAGATGCCGGGAGGCAACGTGTGGAGAGCTCTGCCAGAGGCTTGGAAAGAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435864.2
CDS TCA 72 bp GCAGGTGGCTGTCCTGTGCTAGCATGTTGGACACCATaGTGGCTGGGAGGTCCATGGCCTGATAGGAGTAGG +
Preference number: 6 (lower is better)
Translates to: AGGCPVLACWTP*WLGGPWPDRSR
Trigger: CCTACTCCTATCAGGCCATGGACCTCCCAGCCATCATGGTGTCCAACATGCTAGCACAGGACAGCCACCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000423191.6
CDS CAA 72 bp TGGGCTGCTTGGGTGGGAGCATTTTGGCTGGTGGGTTaGCCTGAGTGCTCTTGGTCTCACCTTGATCTGGGG +
Preference number: 6 (lower is better)
Translates to: WAAWVGAFWLVG*PECSWSHLDLG
Trigger: CCCCAGATCAAGGTGAGACCAAGAGCACTCAGGCAAACCCACCAGCCAAAATGCTCCCACCCAAGCAGCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000423191.6
ENST00000435864.2
CDS CAA 90 bp TGGCATACATGGGCTGCTTGGGTGGGAGCATTTTGGCTGGTGGGTTaGCCTGAGTGCTCTTGGTCTCACCTTGATCTGGGGAGCTCTTGG +
Preference number: 6 (lower is better)
Translates to: WHTWAAWVGAFWLVG*PECSWSHLDLGSSW
Trigger: CCAAGAGCTCCCCAGATCAAGGTGAGACCAAGAGCACTCAGGCAAACCCACCAGCCAAAATGCTCCCACCCAAGCAGCCCATGTATGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000372999.5
ENST00000423191.6
ENST00000435864.2
CDS CAA 90 bp TGGCATACATGGGCTGCTTGGGTGGGAGCATTTTGGCTGGTGGGTTaGCCTGAGTGCTCTTGGTCTCACCTTGATCTGGGGAGCTCTGCT +
Preference number: 6 (lower is better)
Translates to: WHTWAAWVGAFWLVG*PECSWSHLDLGSSA
Trigger: AGCAGAGCTCCCCAGATCAAGGTGAGACCAAGAGCACTCAGGCAAACCCACCAGCCAAAATGCTCCCACCCAAGCAGCCCATGTATGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358131.5
CDS CCA 72 bp GGCATACATGGGCTGCTTGGGTGGGAGCATTTTGGCTaGTGGGTTTGCCTGAGTGCTCTTGGTCTCACCTTG +
Preference number: 6 (lower is better)
Translates to: GIHGLLGWEHFG*WVCLSALGLTL
Trigger: CAAGGTGAGACCAAGAGCACTCAGGCAAACCCACCAGCCAAAATGCTCCCACCCAAGCAGCCCATGTATGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000423191.6
ENST00000435864.2
CDS CCA 72 bp GCATGGCATACATGGGCTGCTTGGGTGGGAGCATTTTaGCTGGTGGGTTTGCCTGAGTGCTCTTGGTCTCAC +
Preference number: 6 (lower is better)
Translates to: AWHTWAAWVGAF*LVGLPECSWSH
Trigger: GTGAGACCAAGAGCACTCAGGCAAACCCACCAGCCAAAATGCTCCCACCCAAGCAGCCCATGTATGCCATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000423191.6
ENST00000435864.2
CDS CCA 72 bp GGAGCATTTTGGCTGGTGGGTTTGCCTGAGTGCTCTTaGTCTCACCTTGATCTGGGGAGCTCTTGGAGACGA +
Preference number: 6 (lower is better)
Translates to: GAFWLVGLPECS*SHLDLGSSWRR
Trigger: TCGTCTCCAAGAGCTCCCCAGATCAAGGTGAGACCAAGAGCACTCAGGCAAACCCACCAGCCAAAATGCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341197.9
ENST00000372999.5
ENST00000423191.6
ENST00000435864.2
CDS CCA 72 bp ATACATGGGCTGCTTGGGTGGGAGCATTTTGGCTGGTaGGTTTGCCTGAGTGCTCTTGGTCTCACCTTGATC +
Preference number: 6 (lower is better)
Translates to: IHGLLGWEHFGW*VCLSALGLTLI
Trigger: GATCAAGGTGAGACCAAGAGCACTCAGGCAAACCCACCAGCCAAAATGCTCCCACCCAAGCAGCCCATGTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341197.9
ENST00000358131.5
ENST00000372999.5
ENST00000423191.6
ENST00000435864.2
CDS CCA 72 bp GAAATAGCAAGCTTTATAAGCCCTCCTGACAACTCTTaGTCCTCTATTGGCTGGAGGCCCAGCACCCCCACC +
Preference number: 6 (lower is better)
Translates to: EIASFISPPDNS*SSIGWRPSTPT
Trigger: GGTGGGGGTGCTGGGCCTCCAGCCAATAGAGGACCAAGAGTTGTCAGGAGGGCTTATAAAGCTTGCTATTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358131.5
CDS CCA 72 bp GGAGCATTTTGGCTGGTGGGTTTGCCTGAGTGCTCTTaGTCTCACCTTGATCTGGGGAGCTCTGCTTCTGTT +
Preference number: 6 (lower is better)
Translates to: GAFWLVGLPECS*SHLDLGSSASV
Trigger: AACAGAAGCAGAGCTCCCCAGATCAAGGTGAGACCAAGAGCACTCAGGCAAACCCACCAGCCAAAATGCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358131.5
CDS CAA 90 bp CACCATCAAACTTCTGCGGAAACACACCTGCAATGCACCAGTGTCTaGCAAGTAGAAGGAGCCCGAGTCTCATTCCACAGAAGCCCAGGC +
Preference number: 6 (lower is better)
Translates to: HHQTSAETHLQCTSV*QVEGARVSFHRSPG
Trigger: GCCTGGGCTTCTGTGGAATGAGACTCGGGCTCCTTCTACTTGCAAGACACTGGTGCATTGCAGGTGTGTTTCCGCAGAAGTTTGATGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358131.5