RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TOR2A (Homo sapiens)

Ensembl gene IDs: ENSG00000160404

Ensembl transcript IDs: ENST00000336067.10, ENST00000373281.8, ENST00000373284.10, ENST00000463256.5, ENST00000463577.2, ENST00000472723.1, ENST00000493439.1, ENST00000496460.5

Found 593 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TGCGGGTTGTCCAGCACCGCGCGGGAGATGACCGGCTCCAGCTCCTaGAGGAGGATCTCCTCGCGGTCCCGCCGGCTGCGCCACGCCTCC +
Preference number: 1 (lower is better)
Translates to: CGLSSTAREMTGSSS*RRISSRSRRLRHAS
Trigger: GGAGGCGTGGCGCAGCCGGCGGGACCGCGAGGAGATCCTCCTGCAGGAGCTGGAGCCGGTCATCTCCCGCGCGGTGCTGGACAACCCGCA
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373281.8
ENST00000463577.2
ENST00000493439.1
ENST00000496460.5
3UTR GCA 90 bp AGGCCCAGCTGGGCCAGCTCGTTGAGCACGCAGTGCCGGACGTGGTaGCGCTGGAGCGGGAGGAAGGGCACCACTGCGTCTAGGAGGCGC +
Preference number: 1 (lower is better)
Translates to: RPSWASSLSTQCRTW*RWSGRKGTTASRRR
Trigger: GCGCCTCCTAGACGCAGTGGTGCCCTTCCTCCCGCTCCAGCGGCACCACGTCCGGCACTGCGTGCTCAACGAGCTGGCCCAGCTGGGCCT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373281.8
ENST00000463256.5
ENST00000463577.2
ENST00000496460.5
3UTR GCA 90 bp TCCCTTGGCTCCAGGCCCAGCTGGGCCAGCTCGTTGAGCACGCAGTaGCGGACGTGGTGCCGCTGGAGCGGGAGGAAGGGCACCACTGCG +
Preference number: 1 (lower is better)
Translates to: SLGSRPSWASSLSTQ*RTWCRWSGRKGTTA
Trigger: CGCAGTGGTGCCCTTCCTCCCGCTCCAGCGGCACCACGTCCGGCACTGCGTGCTCAACGAGCTGGCCCAGCTGGGCCTGGAGCCAAGGGA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373281.8
ENST00000463256.5
ENST00000463577.2
ENST00000496460.5
3UTR TCA 90 bp CTGAGCCAGACTCACGGTGCGGGTTGTCCAGCACCGCGCGGGAGATaGCCGGCTCCAGCTCCTGCAGGAGGATCTCCTCGCGGTCCCGCC +
Preference number: 1 (lower is better)
Translates to: LSQTHGAGCPAPRGR*PAPAPAGGSPRGPA
Trigger: GGCGGGACCGCGAGGAGATCCTCCTGCAGGAGCTGGAGCCGGTCATCTCCCGCGCGGTGCTGGACAACCCGCACCGTGAGTCTGGCTCAG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373281.8
ENST00000463577.2
ENST00000493439.1
3UTR CCA 90 bp TCCAGGCCCAGCTGGGCCAGCTCGTTGAGCACGCAGTGCCGGACGTaGTGCCGCTGGAGCGGGAGGAAGGGCACCACTGCGTCTAGGAGG +
Preference number: 1 (lower is better)
Translates to: SRPSWASSLSTQCRT*CRWSGRKGTTASRR
Trigger: CCTCCTAGACGCAGTGGTGCCCTTCCTCCCGCTCCAGCGGCACCACGTCCGGCACTGCGTGCTCAACGAGCTGGCCCAGCTGGGCCTGGA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373281.8
ENST00000463256.5
ENST00000463577.2
ENST00000496460.5
3UTR CCA 90 bp AGCTGGGCCAGCTCGTTGAGCACGCAGTGCCGGACGTGGTGCCGCTaGAGCGGGAGGAAGGGCACCACTGCGTCTAGGAGGCGCTCTTCC +
Preference number: 1 (lower is better)
Translates to: SWASSLSTQCRTWCR*SGRKGTTASRRRSS
Trigger: GGAAGAGCGCCTCCTAGACGCAGTGGTGCCCTTCCTCCCGCTCCAGCGGCACCACGTCCGGCACTGCGTGCTCAACGAGCTGGCCCAGCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373281.8
ENST00000463256.5
ENST00000463577.2
ENST00000496460.5
3UTR TCA 90 bp AGTTTGAGAAGCCATGGTGCGGGTTGTCCAGCACCGCGCGGGAGATaGCCGGCTCCAGCTCCTGCAGGAGGATCTCCTCGCGGTCCCGCC +
Preference number: 1 (lower is better)
Translates to: SLRSHGAGCPAPRGR*PAPAPAGGSPRGPA
Trigger: GGCGGGACCGCGAGGAGATCCTCCTGCAGGAGCTGGAGCCGGTCATCTCCCGCGCGGTGCTGGACAACCCGCACCATGGCTTCTCAAACT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496460.5
3UTR CCA 90 bp AGGGGAGGAGGTATGGTGCCCGACCAAGGAGGCAAGGGGCAAGGGTaGCAGACTGAGGAGGGAGCACCGCCACGAGCCACAGTCCCTGAG +
Preference number: 1 (lower is better)
Translates to: RGGGMVPDQGGKGQG*QTEEGAPPRATVPE
Trigger: CTCAGGGACTGTGGCTCGTGGCGGTGCTCCCTCCTCAGTCTGCCACCCTTGCCCCTTGCCTCCTTGGTCGGGCACCATACCTCCTCCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000373284.10
ENST00000463577.2
3UTR GCA 90 bp CGGTCCCGCCGGCTGCGCCACGCCTCCAATGCCACCTGGTTGATCTaGTTGCCACCCGTGTTGCTAAAACCATGGGGGACCCAGGCTGAG +
Preference number: 1 (lower is better)
Translates to: RSRRLRHASNATWLI*LPPVLLKPWGTQAE
Trigger: CTCAGCCTGGGTCCCCCATGGTTTTAGCAACACGGGTGGCAAGCAGATCAACCAGGTGGCATTGGAGGCGTGGCGCAGCCGGCGGGACCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373281.8
ENST00000463577.2
3UTR CCA 90 bp ATCTCCTCGCGGTCCCGCCGGCTGCGCCACGCCTCCAATGCCACCTaGTTGATCTGCTTGCCACCCGTGTTGCTAAAACCATGGGGGACC +
Preference number: 1 (lower is better)
Translates to: ISSRSRRLRHASNAT*LICLPPVLLKPWGT
Trigger: GGTCCCCCATGGTTTTAGCAACACGGGTGGCAAGCAGATCAACCAGGTGGCATTGGAGGCGTGGCGCAGCCGGCGGGACCGCGAGGAGAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373281.8
ENST00000463577.2
3UTR CCA 90 bp ACAAAGCTGGGAGTGCCAAAGCCAGGCTCAGAACTGCCGGGTCAGTaGGCAAAGCATGAGACCCCGGGAGAGCCTGGCCCCTGGGTGTGG +
Preference number: 1 (lower is better)
Translates to: TKLGVPKPGSELPGQ*AKHETPGEPGPWVW
Trigger: CCACACCCAGGGGCCAGGCTCTCCCGGGGTCTCATGCTTTGCCCACTGACCCGGCAGTTCTGAGCCTGGCTTTGGCACTCCCAGCTTTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373281.8
ENST00000463577.2
ENST00000493439.1
3UTR TCA 90 bp GGAGCGGGAGGAAGGGCACCACTGCGTCTAGGAGGCGCTCTTCCATaGTGCCCGAGTTTGAGAAGCCATGGTGCGGGTTGTCCAGCACCG +
Preference number: 1 (lower is better)
Translates to: GAGGRAPLRLGGALP*CPSLRSHGAGCPAP
Trigger: CGGTGCTGGACAACCCGCACCATGGCTTCTCAAACTCGGGCATCATGGAAGAGCGCCTCCTAGACGCAGTGGTGCCCTTCCTCCCGCTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496460.5
3UTR GCA 90 bp CAGGAGGATCTCCTCGCGGTCCCGCCGGCTGCGCCACGCCTCCAATaGCACCTGGTTGATCTGCTTGCCACCCGTGTTGCTAAAACCATG +
Preference number: 1 (lower is better)
Translates to: QEDLLAVPPAAPRLQ*HLVDLLATRVAKTM
Trigger: CATGGTTTTAGCAACACGGGTGGCAAGCAGATCAACCAGGTGGCATTGGAGGCGTGGCGCAGCCGGCGGGACCGCGAGGAGATCCTCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373281.8
ENST00000463577.2
3UTR GCA 90 bp CAGGAGGATCTCCTCGCGGTCCCGCCGGCTGCGCCACGCCTCCAATaGCACCTGGTTGATCTGCTTGCCACCCGTGTTGCTGATGAAGAT +
Preference number: 1 (lower is better)
Translates to: QEDLLAVPPAAPRLQ*HLVDLLATRVADED
Trigger: ATCTTCATCAGCAACACGGGTGGCAAGCAGATCAACCAGGTGGCATTGGAGGCGTGGCGCAGCCGGCGGGACCGCGAGGAGATCCTCCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000493439.1
ENST00000496460.5
3UTR GCA 90 bp CACCCAAAGTCACAAAGCTGGGAGTGCCAAAGCCAGGCTCAGAACTaGCGGGTCAGTGGGCAAAGCATGAGACCCCGGGAGAGCCTGGCC +
Preference number: 1 (lower is better)
Translates to: HPKSQSWECQSQAQN*RVSGQSMRPRESLA
Trigger: GGCCAGGCTCTCCCGGGGTCTCATGCTTTGCCCACTGACCCGGCAGTTCTGAGCCTGGCTTTGGCACTCCCAGCTTTGTGACTTTGGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373281.8
ENST00000463577.2
ENST00000493439.1
3UTR CCA 90 bp GGGGCCAAGATGCTCTCGAGCCAGTTTAGAGGCCAGGGCCCTTCCTaGCCATCTGTCCCGTGGCCTAGCCGACACTCCGTTCATCTCACT +
Preference number: 1 (lower is better)
Translates to: GAKMLSSQFRGQGPS*PSVPWPSRHSVHLT
Trigger: AGTGAGATGAACGGAGTGTCGGCTAGGCCACGGGACAGATGGCCAGGAAGGGCCCTGGCCTCTAAACTGGCTCGAGAGCATCTTGGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000373284.10
ENST00000463256.5
ENST00000463577.2
ENST00000496460.5
3UTR CCA 90 bp ATCTCCTCGCGGTCCCGCCGGCTGCGCCACGCCTCCAATGCCACCTaGTTGATCTGCTTGCCACCCGTGTTGCTGATGAAGATGAAGATG +
Preference number: 1 (lower is better)
Translates to: ISSRSRRLRHASNAT*LICLPPVLLMKMKM
Trigger: CATCTTCATCTTCATCAGCAACACGGGTGGCAAGCAGATCAACCAGGTGGCATTGGAGGCGTGGCGCAGCCGGCGGGACCGCGAGGAGAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000493439.1
ENST00000496460.5
3UTR CCA 90 bp GTCAGAGGAAGAAGGCGATTCGGGAGGCCACGGTCTTGCAGCCGTTaGAGGAGAAGAGCTGCTCGTCTTCAGGGAAGAAGGTGGTGCTGT +
Preference number: 1 (lower is better)
Translates to: VRGRRRFGRPRSCSR*RRRAARLQGRRWCC
Trigger: ACAGCACCACCTTCTTCCCTGAAGACGAGCAGCTCTTCTCCTCCAACGGCTGCAAGACCGTGGCCTCCCGAATCGCCTTCTTCCTCTGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000463256.5
ENST00000463577.2
ENST00000496460.5
3UTR TCA 90 bp GGAGCGGGAGGAAGGGCACCACTGCGTCTAGGAGGCGCTCTTCCATaGTGCCCGAGTTTGAGAAGCCATCTGATGAAGATGAAGATGGCT +
Preference number: 1 (lower is better)
Translates to: GAGGRAPLRLGGALP*CPSLRSHLMKMKMA
Trigger: AGCCATCTTCATCTTCATCAGATGGCTTCTCAAACTCGGGCATCATGGAAGAGCGCCTCCTAGACGCAGTGGTGCCCTTCCTCCCGCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463256.5
3UTR TCA 90 bp CAGAGAGGCGGAGCCATGCTGCCTGAGGAAACACAGCGAGGATTCTaGGAGCTGGGACTAAAGGACAAGAACTCTGTTCCTATTTTTCCC +
Preference number: 1 (lower is better)
Translates to: QRGGAMLPEETQRGF*ELGLKDKNSVPIFP
Trigger: GGGAAAAATAGGAACAGAGTTCTTGTCCTTTAGTCCCAGCTCTCAGAATCCTCGCTGTGTTTCCTCAGGCAGCATGGCTCCGCCTCTCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373281.8
ENST00000463577.2
3UTR TCA 90 bp TTCCACAAAGAAGTGGCGATCAAAAAGACTGAGCCCAGAATTTGCTaGGAATGTCCAAAGGGAAATCAACCAGGCGGAATGACAATGTCA +
Preference number: 1 (lower is better)
Translates to: FHKEVAIKKTEPRIC*ECPKGNQPGGMTMS
Trigger: TGACATTGTCATTCCGCCTGGTTGATTTCCCTTTGGACATTCTCAGCAAATTCTGGGCTCAGTCTTTTTGATCGCCACTTCTTTGTGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000463577.2
3UTR-3UTR GCA 90 bp CGGCTCCAGCTCCTGCAGGAGGATCTCCTCGCGGTCCCGCCGGCTGCGCCACGCGCCCCTGGCCTTTCCTaGATGGCCTGGCCATCAGGG +
Preference number: 2 (lower is better)
Translates to: RLQLLQEDLLAVPPAAPRAPGLS*MAWPSG
Trigger: CCCTGATGGCCAGGCCATGCAGGAAAGGCCAGGGGC...GCGTGGCGCAGCCGGCGGGACCGCGAGGAGATCCTCCTGCAGGAGCTGGAGCCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373281.8
ENST00000463577.2
ENST00000496460.5
3UTR CAA 90 bp GAAGCTGCCCGGGAGGGGGCTGCTGAGCCAGACTCACGGTGCGGGTaGTCCAGCACCGCGCGGGAGATGACCGGCTCCAGCTCCTGCAGG +
Preference number: 2 (lower is better)
Translates to: EAAREGAAEPDSRCG*SSTAREMTGSSSCR
Trigger: CCTGCAGGAGCTGGAGCCGGTCATCTCCCGCGCGGTGCTGGACAACCCGCACCGTGAGTCTGGCTCAGCAGCCCCCTCCCGGGCAGCTTC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373281.8
ENST00000463577.2
ENST00000493439.1
3UTR-3UTR TCA 90 bp GGTGCCGCTGGAGCGGGAGGAAGGGCACCACTGCGTCTAGGAGGCGCTCTTCCAGCACCGCGCGGGAGATaGCCGGCTCCAGCTCCTGCA +
Preference number: 2 (lower is better)
Translates to: GAAGAGGRAPLRLGGALPAPRGR*PAPAPA
Trigger: TGCAGGAGCTGGAGCCGGTCATCTCCCGCGCGGTGC...TGGAAGAGCGCCTCCTAGACGCAGTGGTGCCCTTCCTCCCGCTCCAGCGGCACC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373281.8
ENST00000463577.2
ENST00000493439.1
ENST00000496460.5
3UTR-3UTR CCA 90 bp GGTGCCGCTGGAGCGGGAGGAAGGGCACCACTGCGTCTAGGAGGCGCTCTTCCACGGACGTGGTGCCGCTaGAGCGGGAGGAAGGGCACC +
Preference number: 2 (lower is better)
Translates to: GAAGAGGRAPLRLGGALPRTWCR*SGRKGT
Trigger: GGTGCCCTTCCTCCCGCTCCAGCGGCACCACGTCCG...TGGAAGAGCGCCTCCTAGACGCAGTGGTGCCCTTCCTCCCGCTCCAGCGGCACC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000373281.8
ENST00000463256.5
ENST00000463577.2
ENST00000493439.1
ENST00000496460.5
3UTR-3UTR GCA 90 bp GCTCCAGCTCCTGCAGGAGGATCTCCTCGCGGTCCCGCCGGCTGCGCCACGCCTGGGAGGCCACGGTCTTaGAGCCGTTGGAGGAGAAGA +
Preference number: 2 (lower is better)
Translates to: APAPAGGSPRGPAGCATPGRPRS*SRWRRR
Trigger: TCTTCTCCTCCAACGGCTGCAAGACCGTGGCCTCCC...AGGCGTGGCGCAGCCGGCGGGACCGCGAGGAGATCCTCCTGCAGGAGCTGGAGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373281.8
ENST00000463577.2
ENST00000496460.5
3UTR-3UTR GCA 90 bp CCGGCTCCAGCTCCTGCAGGAGGATCTCCTCGCGGTCCCGCCGGCTGCGCCACGGCCACCTGGTTGATCTaGTTGCCACCCGTGTTGCTG +
Preference number: 2 (lower is better)
Translates to: PAPAPAGGSPRGPAGCATATWLI*LPPVLL
Trigger: CAGCAACACGGGTGGCAAGCAGATCAACCAGGTGGC...CGTGGCGCAGCCGGCGGGACCGCGAGGAGATCCTCCTGCAGGAGCTGGAGCCGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000493439.1
ENST00000496460.5
3UTR-3UTR GCA 90 bp CCCTGGGGAAGGTGGCCGGGGCCAAGATGCTCTCGAGCCAGTTTAGAGGCCAGGCCCCACTGTGCCCACTaGAAAGCCGGGCCCCACCTG +
Preference number: 2 (lower is better)
Translates to: PWGRWPGPRCSRASLEARPHCAH*KAGPHL
Trigger: CAGGTGGGGCCCGGCTTTGCAGTGGGCACAGTGGGG...CCTGGCCTCTAAACTGGCTCGAGAGCATCTTGGCCCCGGCCACCTTCCCCAGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000463577.2
3UTR-3UTR CCA 90 bp GCTCCAGCTCCTGCAGGAGGATCTCCTCGCGGTCCCGCCGGCTGCGCCACGCCTCGGTCTTGCAGCCGTTaGAGGAGAAGAGCTGCTCGT +
Preference number: 2 (lower is better)
Translates to: APAPAGGSPRGPAGCATPRSCSR*RRRAAR
Trigger: ACGAGCAGCTCTTCTCCTCCAACGGCTGCAAGACCG...AGGCGTGGCGCAGCCGGCGGGACCGCGAGGAGATCCTCCTGCAGGAGCTGGAGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373281.8
ENST00000463577.2
ENST00000496460.5
3UTR-3UTR CCA 90 bp TGGGGAAGGTGGCCGGGGCCAAGATGCTCTCGAGCCAGTTTAGAGGCCAGGGCCGACCAGGGGTTTCCCTaGGGAAGGTGGCCGGGGCCA +
Preference number: 2 (lower is better)
Translates to: WGRWPGPRCSRASLEARADQGFP*GRWPGP
Trigger: TGGCCCCGGCCACCTTCCCCAGGGAAACCCCTGGTC...GGCCCTGGCCTCTAAACTGGCTCGAGAGCATCTTGGCCCCGGCCACCTTCCCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000373284.10
ENST00000463256.5
ENST00000463577.2
3UTR-3UTR TCA 90 bp AAGGTGGCCGGGGCCAAGATGCTCTCGAGCCAGTTTAGAGGCCAGGGCCCTTCCGCAAGGGTGGCAGACTaGGGAGGGAGCACCGCCACG +
Preference number: 2 (lower is better)
Translates to: KVAGAKMLSSQFRGQGPSARVAD*GGSTAT
Trigger: CGTGGCGGTGCTCCCTCCTCAGTCTGCCACCCTTGC...GGAAGGGCCCTGGCCTCTAAACTGGCTCGAGAGCATCTTGGCCCCGGCCACCTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000373284.10
ENST00000463577.2
3UTR-3UTR TCA 90 bp GGGGCTGCTGAGCCAGACTCACGGTGCGGGTTGTCCAGCACCGCGCGGGAGATGAGGCTGAGACTCAGATaGGGACTAGCGCAGGGCAGG +
Preference number: 2 (lower is better)
Translates to: GAAEPDSRCGLSSTAREMRLRLR*GLAQGR
Trigger: CCTGCCCTGCGCTAGTCCTCATCTGAGTCTCAGCCT...CATCTCCCGCGCGGTGCTGGACAACCCGCACCGTGAGTCTGGCTCAGCAGCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373281.8
ENST00000463577.2
3UTR-3UTR TCA 90 bp GCAGGGCAGGATTGGACCCTCGCTTCCCCGCTGCCACCTGACATAGGAACATGGGCACCGCGCGGGAGATaGCCGGCTCCAGCTCCTGCA +
Preference number: 2 (lower is better)
Translates to: AGQDWTLASPLPPDIGTWAPRGR*PAPAPA
Trigger: TGCAGGAGCTGGAGCCGGTCATCTCCCGCGCGGTGC...CCATGTTCCTATGTCAGGTGGCAGCGGGGAAGCGAGGGTCCAATCCTGCCCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373281.8
ENST00000463577.2
3UTR CAA 90 bp TCCTCGCGGTCCCGCCGGCTGCGCCACGCCTCCAATGCCACCTGGTaGATCTGCTTGCCACCCGTGTTGCTAAAACCATGGGGGACCCAG +
Preference number: 2 (lower is better)
Translates to: SSRSRRLRHASNATW*ICLPPVLLKPWGTQ
Trigger: CTGGGTCCCCCATGGTTTTAGCAACACGGGTGGCAAGCAGATCAACCAGGTGGCATTGGAGGCGTGGCGCAGCCGGCGGGACCGCGAGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373281.8
ENST00000463577.2
3UTR-3UTR GCA 90 bp GGCTCCAGCTCCTGCAGGAGGATCTCCTCGCGGTCCCGCCGGCTGCGCCACGCCTTGGAGGAGAAGAGCTaGTCGTCTTCAGGGAAGAAG +
Preference number: 2 (lower is better)
Translates to: GSSSCRRISSRSRRLRHALEEKS*SSSGKK
Trigger: CTTCTTCCCTGAAGACGAGCAGCTCTTCTCCTCCAA...GGCGTGGCGCAGCCGGCGGGACCGCGAGGAGATCCTCCTGCAGGAGCTGGAGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373281.8
ENST00000463577.2
ENST00000496460.5
3UTR-3UTR GCA 90 bp GGGGGCCGAGGACACCACTCAGAGAGTCAGAGGAAGAAGGCGATTCGGGAGGCCTCGTTGAGCACGCAGTaGCGGACGTGGTGCCGCTGG +
Preference number: 2 (lower is better)
Translates to: GGRGHHSESQRKKAIREASLSTQ*RTWCRW
Trigger: CCAGCGGCACCACGTCCGGCACTGCGTGCTCAACGA...GGCCTCCCGAATCGCCTTCTTCCTCTGACTCTCTGAGTGGTGTCCTCGGCCCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373281.8
ENST00000463256.5
ENST00000463577.2
ENST00000496460.5
3UTR-3UTR GCA 90 bp AAGGTGGCCGGGGCCAAGATGCTCTCGAGCCAGTTTAGAGGCCAGGGCCCTTCCTCGTTGAGCACGCAGTaGCGGACGTGGTGCCGCTGG +
Preference number: 2 (lower is better)
Translates to: KVAGAKMLSSQFRGQGPSSLSTQ*RTWCRW
Trigger: CCAGCGGCACCACGTCCGGCACTGCGTGCTCAACGA...GGAAGGGCCCTGGCCTCTAAACTGGCTCGAGAGCATCTTGGCCCCGGCCACCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373281.8
ENST00000463256.5
ENST00000463577.2
ENST00000496460.5
3UTR-3UTR CCA 90 bp TCCTGCAGGAGGATCTCCTCGCGGTCCCGCCGGCTGCGCCACGCCTCCAATGCCTCTCACTTGGTGCTCTaGGTTCCTGTGACAGAGGCC +
Preference number: 2 (lower is better)
Translates to: SCRRISSRSRRLRHASNASHLVL*VPVTEA
Trigger: GGCCTCTGTCACAGGAACCCAGAGCACCAAGTGAGA...GGCATTGGAGGCGTGGCGCAGCCGGCGGGACCGCGAGGAGATCCTCCTGCAGGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373281.8
ENST00000463577.2
ENST00000496460.5
3UTR-3UTR CCA 90 bp ACGGTGCGGGTTGTCCAGCACCGCGCGGGAGATGACCGGCTCCAGCTCCTGCAGCCACCTGGCTTGATATaGACACAGGGTGTGGGGTGG +
Preference number: 2 (lower is better)
Translates to: TVRVVQHRAGDDRLQLLQPPGLI*TQGVGW
Trigger: CCACCCCACACCCTGTGTCCATATCAAGCCAGGTGG...CTGCAGGAGCTGGAGCCGGTCATCTCCCGCGCGGTGCTGGACAACCCGCACCGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373281.8
ENST00000463577.2
3UTR-3UTR TCA 90 bp CAGTTTAGAGGCCAGGGCCCTTCCTGGCCATCTGTCCCGTGGCCTAGCCGACACAGTGAGGTTCTGGGGTaGCCAGGGGTTTCCCTGGGG +
Preference number: 2 (lower is better)
Translates to: QFRGQGPSWPSVPWPSRHSEVLG*PGVSLG
Trigger: CCCCAGGGAAACCCCTGGTCACCCCAGAACCTCACT...GTGTCGGCTAGGCCACGGGACAGATGGCCAGGAAGGGCCCTGGCCTCTAAACTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000373284.10
ENST00000463256.5
ENST00000463577.2
3UTR-3UTR TCA 90 bp CCTGGCCATCTGTCCCGTGGCCTAGCCGACACTCCGTTCATCTCACTTGGTGCTGCAAGGGTGGCAGACTaGGGAGGGAGCACCGCCACG +
Preference number: 2 (lower is better)
Translates to: PGHLSRGLADTPFISLGAARVAD*GGSTAT
Trigger: CGTGGCGGTGCTCCCTCCTCAGTCTGCCACCCTTGC...AGCACCAAGTGAGATGAACGGAGTGTCGGCTAGGCCACGGGACAGATGGCCAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000373284.10
ENST00000463577.2
3UTR-3UTR GCA 90 bp CTGGGTGTAGGACTCAGGGGCTGTAAGGCTCACCCAAAGTCACAAAGCTGGGAGCGCGGTCCCGCCGGCTaGGCCACGCCTCCAATGCCA +
Preference number: 2 (lower is better)
Translates to: LGVGLRGCKAHPKSQSWERGPAG*ATPPMP
Trigger: TGGCATTGGAGGCGTGGCGCAGCCGGCGGGACCGCG...CTCCCAGCTTTGTGACTTTGGGTGAGCCTTACAGCCCCTGAGTCCTACACCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373281.8
ENST00000463577.2
ENST00000493439.1
3UTR-3UTR CCA 90 bp GGGGCTGCTGAGCCAGACTCACGGTGCGGGTTGTCCAGCACCGCGCGGGAGATGTCTCACTTGGTGCTCTaGGTTCCTGTGACAGAGGCC +
Preference number: 2 (lower is better)
Translates to: GAAEPDSRCGLSSTAREMSHLVL*VPVTEA
Trigger: GGCCTCTGTCACAGGAACCCAGAGCACCAAGTGAGA...CATCTCCCGCGCGGTGCTGGACAACCCGCACCGTGAGTCTGGCTCAGCAGCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373281.8
ENST00000463577.2
3UTR-3UTR CCA 90 bp AGTCAGAGGAAGAAGGCGATTCGGGAGGCCACGGTCTTGCAGCCGTTGGAGGAGGACCAGGGGTTTCCCTaGGGAAGGTGGCCGGGGCCA +
Preference number: 2 (lower is better)
Translates to: SQRKKAIREATVLQPLEEDQGFP*GRWPGP
Trigger: TGGCCCCGGCCACCTTCCCCAGGGAAACCCCTGGTC...CTCCTCCAACGGCTGCAAGACCGTGGCCTCCCGAATCGCCTTCTTCCTCTGACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000463256.5
ENST00000463577.2
3UTR-3UTR CCA 90 bp CCCTGGGGAAGGTGGCCGGGGCCAAGATGCTCTCGAGCCAGTTTAGAGGCCAGGGGCTCAGTGAGGTTCTaGGGTGACCAGGGGTTTCCC +
Preference number: 2 (lower is better)
Translates to: PWGRWPGPRCSRASLEARGSVRF*GDQGFP
Trigger: GGGAAACCCCTGGTCACCCCAGAACCTCACTGAGCC...CCTGGCCTCTAAACTGGCTCGAGAGCATCTTGGCCCCGGCCACCTTCCCCAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000373284.10
ENST00000463256.5
ENST00000463577.2
3UTR-3UTR CCA 90 bp AGTCAGAGGAAGAAGGCGATTCGGGAGGCCACGGTCTTGCAGCCGTTGGAGGAGGGCTCCAGGCCCAGCTaGGCCAGCTCGTTGAGCACG +
Preference number: 2 (lower is better)
Translates to: SQRKKAIREATVLQPLEEGSRPS*ASSLST
Trigger: CGTGCTCAACGAGCTGGCCCAGCTGGGCCTGGAGCC...CTCCTCCAACGGCTGCAAGACCGTGGCCTCCCGAATCGCCTTCTTCCTCTGACT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373281.8
ENST00000463256.5
ENST00000463577.2
ENST00000496460.5
3UTR-3UTR TCA 90 bp CGCCTTCTGGGTGTAGGACTCAGGGGCTGTAAGGCTCACCCAAAGTCACAAAGCGCACCGCGCGGGAGATaGCCGGCTCCAGCTCCTGCA +
Preference number: 2 (lower is better)
Translates to: RLLGVGLRGCKAHPKSQSAPRGR*PAPAPA
Trigger: TGCAGGAGCTGGAGCCGGTCATCTCCCGCGCGGTGC...GCTTTGTGACTTTGGGTGAGCCTTACAGCCCCTGAGTCCTACACCCAGAAGGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373281.8
ENST00000463577.2
ENST00000493439.1
3UTR-3UTR GCA 90 bp CCTTCCTGGCCATCTGTCCCGTGGCCTAGCCGACACTCCGTTCATCTCACTTGGGCCCCTGGCCTTTCCTaGATGGCCTGGCCATCAGGG +
Preference number: 2 (lower is better)
Translates to: PSWPSVPWPSRHSVHLTWAPGLS*MAWPSG
Trigger: CCCTGATGGCCAGGCCATGCAGGAAAGGCCAGGGGC...CCAAGTGAGATGAACGGAGTGTCGGCTAGGCCACGGGACAGATGGCCAGGAAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000373284.10
ENST00000463256.5
ENST00000463577.2
ENST00000496460.5
3UTR-3UTR GCA 90 bp TCCTGGCCATCTGTCCCGTGGCCTAGCCGACACTCCGTTCATCTCACTTGGTGCGCCCCTGGCCTTTCCTaGATGGCCTGGCCATCAGGG +
Preference number: 2 (lower is better)
Translates to: SWPSVPWPSRHSVHLTWCAPGLS*MAWPSG
Trigger: CCCTGATGGCCAGGCCATGCAGGAAAGGCCAGGGGC...GCACCAAGTGAGATGAACGGAGTGTCGGCTAGGCCACGGGACAGATGGCCAGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000373284.10
ENST00000463256.5
ENST00000463577.2
ENST00000496460.5
3UTR-3UTR GCA 90 bp GGTGCCGCTGGAGCGGGAGGAAGGGCACCACTGCGTCTAGGAGGCGCTCTTCCAGGGCAGGAGGAAAAATaGTGGCCTCAGTTCCCTCAG +
Preference number: 2 (lower is better)
Translates to: GAAGAGGRAPLRLGGALPGQEEK*WPQFPQ
Trigger: CTGAGGGAACTGAGGCCAGCATTTTTCCTCCTGCCC...TGGAAGAGCGCCTCCTAGACGCAGTGGTGCCCTTCCTCCCGCTCCAGCGGCACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373281.8
ENST00000463577.2
ENST00000493439.1
3UTR-3UTR CCA 90 bp CCCTGGGGAAGGTGGCCGGGGCCAAGATGCTCTCGAGCCAGTTTAGAGGCCAGGCGGTCTTGCAGCCGTTaGAGGAGAAGAGCTGCTCGT +
Preference number: 2 (lower is better)
Translates to: PWGRWPGPRCSRASLEARRSCSR*RRRAAR
Trigger: ACGAGCAGCTCTTCTCCTCCAACGGCTGCAAGACCG...CCTGGCCTCTAAACTGGCTCGAGAGCATCTTGGCCCCGGCCACCTTCCCCAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000463256.5
ENST00000463577.2
3UTR-3UTR CCA 90 bp TGCCGCTGGAGCGGGAGGAAGGGCACCACTGCGTCTAGGAGGCGCTCTTCCATGCGGTCTTGCAGCCGTTaGAGGAGAAGAGCTGCTCGT +
Preference number: 2 (lower is better)
Translates to: CRWSGRKGTTASRRRSSMRSCSR*RRRAAR
Trigger: ACGAGCAGCTCTTCTCCTCCAACGGCTGCAAGACCG...CATGGAAGAGCGCCTCCTAGACGCAGTGGTGCCCTTCCTCCCGCTCCAGCGGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373281.8
ENST00000463256.5
ENST00000463577.2
ENST00000496460.5
3UTR-3UTR CCA 90 bp GGAAGGTGGCCGGGGCCAAGATGCTCTCGAGCCAGTTTAGAGGCCAGGGCCCTTGGCTCAGTGAGGTTCTaGGGTGACCAGGGGTTTCCC +
Preference number: 2 (lower is better)
Translates to: GRWPGPRCSRASLEARALGSVRF*GDQGFP
Trigger: GGGAAACCCCTGGTCACCCCAGAACCTCACTGAGCC...AAGGGCCCTGGCCTCTAAACTGGCTCGAGAGCATCTTGGCCCCGGCCACCTTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000373284.10
ENST00000463256.5
ENST00000463577.2
3UTR-3UTR CCA 90 bp CCGGCTCCAGCTCCTGCAGGAGGATCTCCTCGCGGTCCCGCCGGCTGCGCCACGGCTTCCACAAAGAAGTaGCGATCAAAAAGACTGAGC +
Preference number: 2 (lower is better)
Translates to: PAPAPAGGSPRGPAGCATASTKK*RSKRLS
Trigger: GCTCAGTCTTTTTGATCGCCACTTCTTTGTGGAAGC...CGTGGCGCAGCCGGCGGGACCGCGAGGAGATCCTCCTGCAGGAGCTGGAGCCGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373281.8
ENST00000463577.2
3UTR-3UTR CCA 90 bp ATCTCACTTGGTGCTCTGGGTTCCTGTGACAGAGGCCCCTGGCCTTTCCTGCATACGCAGTGCCGGACGTaGTGCCGCTGGAGCGGGAGG +
Preference number: 2 (lower is better)
Translates to: ISLGALGSCDRGPWPFLHTQCRT*CRWSGR
Trigger: CCTCCCGCTCCAGCGGCACCACGTCCGGCACTGCGT...ATGCAGGAAAGGCCAGGGGCCTCTGTCACAGGAACCCAGAGCACCAAGTGAGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373281.8
ENST00000463256.5
ENST00000463577.2
ENST00000496460.5
3UTR CAA 90 bp TCCTCGCGGTCCCGCCGGCTGCGCCACGCCTCCAATGCCACCTGGTaGATCTGCTTGCCACCCGTGTTGCTGATGAAGATGAAGATGGCT +
Preference number: 2 (lower is better)
Translates to: SSRSRRLRHASNATW*ICLPPVLLMKMKMA
Trigger: AGCCATCTTCATCTTCATCAGCAACACGGGTGGCAAGCAGATCAACCAGGTGGCATTGGAGGCGTGGCGCAGCCGGCGGGACCGCGAGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000493439.1
ENST00000496460.5
3UTR-3UTR TCA 90 bp CACTTGGTGCTCTGGGTTCCTGTGACAGAGGCCCCTGGCCTTTCCTGCATGGCCGAGGTCAAGGCTCAGTaGGGTTCTGGGGTGACCAGG +
Preference number: 2 (lower is better)
Translates to: HLVLWVPVTEAPGLSCMAEVKAQ*GSGVTR
Trigger: CCTGGTCACCCCAGAACCTCACTGAGCCTTGACCTC...GGCCATGCAGGAAAGGCCAGGGGCCTCTGTCACAGGAACCCAGAGCACCAAGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000373284.10
ENST00000463256.5
ENST00000463577.2
3UTR-3UTR TCA 90 bp GGAAGGTGGCCGGGGCCAAGATGCTCTCGAGCCAGTTTAGAGGCCAGGGCCCTTCCAATGCCACCTGGTTaGTCTGCTTGCCACCCGTGT +
Preference number: 2 (lower is better)
Translates to: GRWPGPRCSRASLEARALPMPPG*SACHPC
Trigger: ACACGGGTGGCAAGCAGATCAACCAGGTGGCATTGG...AAGGGCCCTGGCCTCTAAACTGGCTCGAGAGCATCTTGGCCCCGGCCACCTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373281.8
ENST00000463577.2
ENST00000496460.5
3UTR-3UTR TCA 90 bp GGTGCCGCTGGAGCGGGAGGAAGGGCACCACTGCGTCTAGGAGGCGCTCTTCCACATGATGCCCGAGTTTaGGAAGCCATCTGCAGGAAG +
Preference number: 2 (lower is better)
Translates to: GAAGAGGRAPLRLGGALPHDARV*EAICRK
Trigger: CTTCCTGCAGATGGCTTCTCAAACTCGGGCATCATG...TGGAAGAGCGCCTCCTAGACGCAGTGGTGCCCTTCCTCCCGCTCCAGCGGCACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373281.8
ENST00000463577.2
ENST00000493439.1
3UTR-3UTR GCA 90 bp GGACGTGGTGCCGCTGGAGCGGGAGGAAGGGCACCACTGCGTCTAGGAGGCGCTTTGGAGGAGAAGAGCTaGTCGTCTTCAGGGAAGAAG +
Preference number: 2 (lower is better)
Translates to: GRGAAGAGGRAPLRLGGALEEKS*SSSGKK
Trigger: CTTCTTCCCTGAAGACGAGCAGCTCTTCTCCTCCAA...AGCGCCTCCTAGACGCAGTGGTGCCCTTCCTCCCGCTCCAGCGGCACCACGTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373281.8
ENST00000463256.5
ENST00000463577.2
ENST00000496460.5
3UTR-3UTR GCA 90 bp AGGAAGGGCACCACTGCGTCTAGGAGGCGCTCTTCCATGATGCCCGAGTTTGAGGCCCCTGGCCTTTCCTaGATGGCCTGGCCATCAGGG +
Preference number: 2 (lower is better)
Translates to: RKGTTASRRRSSMMPEFEAPGLS*MAWPSG
Trigger: CCCTGATGGCCAGGCCATGCAGGAAAGGCCAGGGGC...CTCAAACTCGGGCATCATGGAAGAGCGCCTCCTAGACGCAGTGGTGCCCTTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373281.8
ENST00000463256.5
ENST00000463577.2
ENST00000496460.5
3UTR-3UTR GCA 90 bp AGTCAGAGGAAGAAGGCGATTCGGGAGGCCACGGTCTTGCAGCCGTTGGAGGAGGGGGAGGAGGTATGGTaGCCGACCAAGGAGGCAAGG +
Preference number: 2 (lower is better)
Translates to: SQRKKAIREATVLQPLEEGEEVW*PTKEAR
Trigger: CCTTGCCTCCTTGGTCGGGCACCATACCTCCTCCCC...CTCCTCCAACGGCTGCAAGACCGTGGCCTCCCGAATCGCCTTCTTCCTCTGACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000463577.2
3UTR-3UTR GCA 90 bp GGGGGCCGAGGACACCACTCAGAGAGTCAGAGGAAGAAGGCGATTCGGGAGGCCTTTGAGAAGCCATGGTaGGGGTTGTCCAGCACCGCG +
Preference number: 2 (lower is better)
Translates to: GGRGHHSESQRKKAIREAFEKPW*GLSSTA
Trigger: CGCGGTGCTGGACAACCCGCACCATGGCTTCTCAAA...GGCCTCCCGAATCGCCTTCTTCCTCTGACTCTCTGAGTGGTGTCCTCGGCCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000496460.5
3UTR-3UTR CCA 90 bp TGGGGAAGGTGGCCGGGGCCAAGATGCTCTCGAGCCAGTTTAGAGGCCAGGGCCCTTCAGGGAAGAAGGTaGTGCTGTCCAGCACAGCCT +
Preference number: 2 (lower is better)
Translates to: WGRWPGPRCSRASLEARALQGRR*CCPAQP
Trigger: AGGCTGTGCTGGACAGCACCACCTTCTTCCCTGAAG...GGCCCTGGCCTCTAAACTGGCTCGAGAGCATCTTGGCCCCGGCCACCTTCCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000463256.5
ENST00000463577.2
ENST00000496460.5
3UTR-3UTR CCA 90 bp GGAAGGTGGCCGGGGCCAAGATGCTCTCGAGCCAGTTTAGAGGCCAGGGCCCTTCGGTCTTGCAGCCGTTaGAGGAGAAGAGCTGCTCGT +
Preference number: 2 (lower is better)
Translates to: GRWPGPRCSRASLEARALRSCSR*RRRAAR
Trigger: ACGAGCAGCTCTTCTCCTCCAACGGCTGCAAGACCG...AAGGGCCCTGGCCTCTAAACTGGCTCGAGAGCATCTTGGCCCCGGCCACCTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000463256.5
ENST00000463577.2
ENST00000496460.5
3UTR-3UTR CCA 90 bp GGGAAGGTGGCCGGGGCCAAGATGCTCTCGAGCCAGTTTAGAGGCCAGGGCCCTTCTCACTTGGTGCTCTaGGTTCCTGTGACAGAGGCC +
Preference number: 2 (lower is better)
Translates to: GKVAGAKMLSSQFRGQGPSHLVL*VPVTEA
Trigger: GGCCTCTGTCACAGGAACCCAGAGCACCAAGTGAGA...AGGGCCCTGGCCTCTAAACTGGCTCGAGAGCATCTTGGCCCCGGCCACCTTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000373284.10
ENST00000463256.5
ENST00000463577.2
ENST00000496460.5
3UTR-3UTR CCA 90 bp GTCAGAGGAAGAAGGCGATTCGGGAGGCCACGGTCTTGCAGCCGTTGGAGGAGAGGAGGGGAGGAGGTATaGTGCCCGACCAAGGAGGCA +
Preference number: 2 (lower is better)
Translates to: VRGRRRFGRPRSCSRWRRGGEEV*CPTKEA
Trigger: TGCCTCCTTGGTCGGGCACCATACCTCCTCCCCTCC...TCTCCTCCAACGGCTGCAAGACCGTGGCCTCCCGAATCGCCTTCTTCCTCTGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000463577.2
3UTR-3UTR CCA 90 bp AAGGTGGCCGGGGCCAAGATGCTCTCGAGCCAGTTTAGAGGCCAGGGCCCTTCCCCACCTGGCTTGATATaGACACAGGGTGTGGGGTGG +
Preference number: 2 (lower is better)
Translates to: KVAGAKMLSSQFRGQGPSPPGLI*TQGVGW
Trigger: CCACCCCACACCCTGTGTCCATATCAAGCCAGGTGG...GGAAGGGCCCTGGCCTCTAAACTGGCTCGAGAGCATCTTGGCCCCGGCCACCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000373284.10
ENST00000463577.2
3UTR-3UTR CCA 90 bp AGAGGAAGAAGGCGATTCGGGAGGCCACGGTCTTGCAGCCGTTGGAGGAGAAGAAGCGCAGGGCAGGATTaGACCCTCGCTTCCCCGCTG +
Preference number: 2 (lower is better)
Translates to: RGRRRFGRPRSCSRWRRRSAGQD*TLASPL
Trigger: CAGCGGGGAAGCGAGGGTCCAATCCTGCCCTGCGCT...TCTTCTCCTCCAACGGCTGCAAGACCGTGGCCTCCCGAATCGCCTTCTTCCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373281.8
ENST00000463577.2
3UTR-3UTR TCA 90 bp GAGGAGAAGAGCTGCTCGTCTTCAGGGAAGAAGGTGGTGCTGTCCAGCACAGCCTCAGTGGGCAAAGCATaGGACCCCGGGAGAGCCTGG +
Preference number: 2 (lower is better)
Translates to: EEKSCSSSGKKVVLSSTASVGKA*DPGRAW
Trigger: CCAGGCTCTCCCGGGGTCTCATGCTTTGCCCACTGA...GGCTGTGCTGGACAGCACCACCTTCTTCCCTGAAGACGAGCAGCTCTTCTCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373281.8
ENST00000463577.2
3UTR-3UTR CCA 90 bp GGAAGGTGGCCGGGGCCAAGATGCTCTCGAGCCAGTTTAGAGGCCAGGGCCCTTCTTCAGGGAAGAAGGTaGTGCTGTCCAGCACAGCCT +
Preference number: 2 (lower is better)
Translates to: GRWPGPRCSRASLEARALLQGRR*CCPAQP
Trigger: AGGCTGTGCTGGACAGCACCACCTTCTTCCCTGAAG...AAGGGCCCTGGCCTCTAAACTGGCTCGAGAGCATCTTGGCCCCGGCCACCTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000463256.5
ENST00000463577.2
ENST00000496460.5
3UTR-3UTR CCA 90 bp AGGTGGCCGGGGCCAAGATGCTCTCGAGCCAGTTTAGAGGCCAGGGCCCTTCCTCTTCAGGGAAGAAGGTaGTGCTGTCCAGCACAGCCT +
Preference number: 2 (lower is better)
Translates to: RWPGPRCSRASLEARALPLQGRR*CCPAQP
Trigger: AGGCTGTGCTGGACAGCACCACCTTCTTCCCTGAAG...AGGAAGGGCCCTGGCCTCTAAACTGGCTCGAGAGCATCTTGGCCCCGGCCACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000463256.5
ENST00000463577.2
ENST00000496460.5
3UTR-3UTR CCA 90 bp AAGGTGGCCGGGGCCAAGATGCTCTCGAGCCAGTTTAGAGGCCAGGGCCCTTCCTCTCACTTGGTGCTCTaGGTTCCTGTGACAGAGGCC +
Preference number: 2 (lower is better)
Translates to: KVAGAKMLSSQFRGQGPSSHLVL*VPVTEA
Trigger: GGCCTCTGTCACAGGAACCCAGAGCACCAAGTGAGA...GGAAGGGCCCTGGCCTCTAAACTGGCTCGAGAGCATCTTGGCCCCGGCCACCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000373284.10
ENST00000463256.5
ENST00000463577.2
ENST00000496460.5
3UTR-3UTR CCA 90 bp CCATCTGTCCCGTGGCCTAGCCGACACTCCGTTCATCTCACTTGGTGCTCTGGGTGGCCATCTGTCCCGTaGCCTAGCCGACACTCCGTT +
Preference number: 2 (lower is better)
Translates to: PSVPWPSRHSVHLTWCSGWPSVP*PSRHSV
Trigger: AACGGAGTGTCGGCTAGGCCACGGGACAGATGGCCA...CCCAGAGCACCAAGTGAGATGAACGGAGTGTCGGCTAGGCCACGGGACAGATGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000373284.10
ENST00000463256.5
ENST00000463577.2
ENST00000496460.5
3UTR-3UTR CCA 90 bp CCTGGCCATCTGTCCCGTGGCCTAGCCGACACTCCGTTCATCTCACTTGGTGCTGGCTCAGTGAGGTTCTaGGGTGACCAGGGGTTTCCC +
Preference number: 2 (lower is better)
Translates to: PGHLSRGLADTPFISLGAGSVRF*GDQGFP
Trigger: GGGAAACCCCTGGTCACCCCAGAACCTCACTGAGCC...AGCACCAAGTGAGATGAACGGAGTGTCGGCTAGGCCACGGGACAGATGGCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000373284.10
ENST00000463256.5
ENST00000463577.2
3UTR-3UTR CCA 90 bp GAGGAGAAGAGCTGCTCGTCTTCAGGGAAGAAGGTGGTGCTGTCCAGCACAGCCGGCAAGGGGCAAGGGTaGCAGACTGAGGAGGGAGCA +
Preference number: 2 (lower is better)
Translates to: EEKSCSSSGKKVVLSSTAGKGQG*QTEEGA
Trigger: TGCTCCCTCCTCAGTCTGCCACCCTTGCCCCTTGCC...GGCTGTGCTGGACAGCACCACCTTCTTCCCTGAAGACGAGCAGCTCTTCTCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000463577.2
3UTR-3UTR TCA 90 bp GGAAGGTGGCCGGGGCCAAGATGCTCTCGAGCCAGTTTAGAGGCCAGGGCCCTTACACAGCGAGGATTCTaGGAGCTGGGACTAAAGGAC +
Preference number: 2 (lower is better)
Translates to: GRWPGPRCSRASLEARALTQRGF*ELGLKD
Trigger: GTCCTTTAGTCCCAGCTCTCAGAATCCTCGCTGTGT...AAGGGCCCTGGCCTCTAAACTGGCTCGAGAGCATCTTGGCCCCGGCCACCTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373281.8
ENST00000463577.2
3UTR-3UTR TCA 90 bp AAGTGGCAGCTTGAGTCCCTCCATTTCTGGAAACTGAGAAGGCTCCACCTGGCTGCTGGGCCAGCTCGTTaGGCACGCAGTGCCGGACGT +
Preference number: 2 (lower is better)
Translates to: KWQLESLHFWKLRRLHLAAGPAR*ARSAGR
Trigger: ACGTCCGGCACTGCGTGCTCAACGAGCTGGCCCAGC...AGCCAGGTGGAGCCTTCTCAGTTTCCAGAAATGGAGGGACTCAAGCTGCCACTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373281.8
ENST00000463577.2
3UTR-3UTR GCA 90 bp CCTGGCCATCTGTCCCGTGGCCTAGCCGACACTCCGTTCATCTCACTTGGTGCTTGGCCGGGGCCAAGATaGTCTCGAGCCAGTTTAGAG +
Preference number: 2 (lower is better)
Translates to: PGHLSRGLADTPFISLGAWPGPR*SRASLE
Trigger: CTCTAAACTGGCTCGAGAGCATCTTGGCCCCGGCCA...AGCACCAAGTGAGATGAACGGAGTGTCGGCTAGGCCACGGGACAGATGGCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000373284.10
ENST00000463256.5
ENST00000463577.2
ENST00000496460.5
3UTR-3UTR GCA 90 bp GCAGGGCAGGATTGGACCCTCGCTTCCCCGCTGCCACCTGACATAGGAACATGGGCCACCTGGTTGATCTaGTTGCCACCCGTGTTGCTA +
Preference number: 2 (lower is better)
Translates to: AGQDWTLASPLPPDIGTWATWLI*LPPVLL
Trigger: TAGCAACACGGGTGGCAAGCAGATCAACCAGGTGGC...CCATGTTCCTATGTCAGGTGGCAGCGGGGAAGCGAGGGTCCAATCCTGCCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373281.8
ENST00000463577.2
3UTR-3UTR GCA 90 bp GGAAGAAGGCGATTCGGGAGGCCACGGTCTTGCAGCCGTTGGAGGAGAAGAGCTGCCACCTGGTTGATCTaGTTGCCACCCGTGTTGCTG +
Preference number: 2 (lower is better)
Translates to: GRRRFGRPRSCSRWRRRAATWLI*LPPVLL
Trigger: CAGCAACACGGGTGGCAAGCAGATCAACCAGGTGGC...AGCTCTTCTCCTCCAACGGCTGCAAGACCGTGGCCTCCCGAATCGCCTTCTTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496460.5
3UTR-3UTR CCA 90 bp GGGTTTCCCTGGGGAAGGTGGCCGGGGCCAAGATGCTCTCGAGCCAGTTTAGAGCTTCAGGGAAGAAGGTaGTGCTGTCCAGCACAGCCT +
Preference number: 2 (lower is better)
Translates to: GFPWGRWPGPRCSRASLELQGRR*CCPAQP
Trigger: AGGCTGTGCTGGACAGCACCACCTTCTTCCCTGAAG...CTCTAAACTGGCTCGAGAGCATCTTGGCCCCGGCCACCTTCCCCAGGGAAACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000463256.5
ENST00000463577.2
3UTR-3UTR CCA 90 bp AGCTGCTCGTCTTCAGGGAAGAAGGTGGTGCTGTCCAGCACAGCCTGGACAACCTGGCCATCTGTCCCGTaGCCTAGCCGACACTCCGTT +
Preference number: 2 (lower is better)
Translates to: SCSSSGKKVVLSSTAWTTWPSVP*PSRHSV
Trigger: AACGGAGTGTCGGCTAGGCCACGGGACAGATGGCCA...GGTTGTCCAGGCTGTGCTGGACAGCACCACCTTCTTCCCTGAAGACGAGCAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000463256.5
ENST00000463577.2
ENST00000496460.5
3UTR-3UTR CCA 90 bp GGTGGCAGACTGAGGAGGGAGCACCGCCACGAGCCACAGTCCCTGAGTTATAATTTTCCCTGGGGAAGGTaGCCGGGGCCAAGATGCTCT +
Preference number: 2 (lower is better)
Translates to: GGRLRREHRHEPQSLSYNFPWGR*PGPRCS
Trigger: AGAGCATCTTGGCCCCGGCCACCTTCCCCAGGGAAA...ATTATAACTCAGGGACTGTGGCTCGTGGCGGTGCTCCCTCCTCAGTCTGCCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000373284.10
ENST00000463577.2
3UTR-3UTR CCA 90 bp AGCTGCTCGTCTTCAGGGAAGAAGGTGGTGCTGTCCAGCACAGCCTGGACAACCGGCTCAGTGAGGTTCTaGGGTGACCAGGGGTTTCCC +
Preference number: 2 (lower is better)
Translates to: SCSSSGKKVVLSSTAWTTGSVRF*GDQGFP
Trigger: GGGAAACCCCTGGTCACCCCAGAACCTCACTGAGCC...GGTTGTCCAGGCTGTGCTGGACAGCACCACCTTCTTCCCTGAAGACGAGCAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000463256.5
ENST00000463577.2
3UTR-3UTR CCA 90 bp GCCCTTCCTGGCCATCTGTCCCGTGGCCTAGCCGACACTCCGTTCATCTCACTTCCACCTGGCTTGATATaGACACAGGGTGTGGGGTGG +
Preference number: 2 (lower is better)
Translates to: ALPGHLSRGLADTPFISLPPGLI*TQGVGW
Trigger: CCACCCCACACCCTGTGTCCATATCAAGCCAGGTGG...AAGTGAGATGAACGGAGTGTCGGCTAGGCCACGGGACAGATGGCCAGGAAGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000373284.10
ENST00000463577.2
3UTR-3UTR CCA 90 bp GGAAGGTGGCCGGGGCCAAGATGCTCTCGAGCCAGTTTAGAGGCCAGGGCCCTTAAAACCAGGCCCAAGTaGCAGCTTGAGTCCCTCCAT +
Preference number: 2 (lower is better)
Translates to: GRWPGPRCSRASLEARALKTRPK*QLESLH
Trigger: ATGGAGGGACTCAAGCTGCCACTTGGGCCTGGTTTT...AAGGGCCCTGGCCTCTAAACTGGCTCGAGAGCATCTTGGCCCCGGCCACCTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000373284.10
ENST00000463577.2
3UTR-3UTR CCA 90 bp AGAGAGTCAGAGGAAGAAGGCGATTCGGGAGGCCACGGTCTTGCAGCCGTTGGAGAACTGCCGGGTCAGTaGGCAAAGCATGAGACCCCG +
Preference number: 2 (lower is better)
Translates to: RESEEEGDSGGHGLAAVGELPGQ*AKHETP
Trigger: CGGGGTCTCATGCTTTGCCCACTGACCCGGCAGTTC...TCCAACGGCTGCAAGACCGTGGCCTCCCGAATCGCCTTCTTCCTCTGACTCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373281.8
ENST00000463577.2
3UTR CAA 90 bp AGTCAGAGGAAGAAGGCGATTCGGGAGGCCACGGTCTTGCAGCCGTaGGAGGAGAAGAGCTGCTCGTCTTCAGGGAAGAAGGTGGTGCTG +
Preference number: 2 (lower is better)
Translates to: SQRKKAIREATVLQP*EEKSCSSSGKKVVL
Trigger: CAGCACCACCTTCTTCCCTGAAGACGAGCAGCTCTTCTCCTCCAACGGCTGCAAGACCGTGGCCTCCCGAATCGCCTTCTTCCTCTGACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000463256.5
ENST00000463577.2
ENST00000496460.5
3UTR-3UTR TCA 90 bp TCGTCTTCAGGGAAGAAGGTGGTGCTGTCCAGCACAGCCTGGACAACCTCATCCGAGGTCAAGGCTCAGTaGGGTTCTGGGGTGACCAGG +
Preference number: 2 (lower is better)
Translates to: SSSGKKVVLSSTAWTTSSEVKAQ*GSGVTR
Trigger: CCTGGTCACCCCAGAACCTCACTGAGCCTTGACCTC...GGATGAGGTTGTCCAGGCTGTGCTGGACAGCACCACCTTCTTCCCTGAAGACGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373281.8
ENST00000463256.5
ENST00000463577.2
3UTR-3UTR TCA 90 bp AAGGGGCAAGGGTGGCAGACTGAGGAGGGAGCACCGCCACGAGCCACAGTCCCTGGCGATCAAAAAGACTaGGCCCAGAATTTGCTGAGA +
Preference number: 2 (lower is better)
Translates to: KGQGWQTEEGAPPRATVPGDQKD*AQNLLR
Trigger: TCTCAGCAAATTCTGGGCTCAGTCTTTTTGATCGCC...AGGGACTGTGGCTCGTGGCGGTGCTCCCTCCTCAGTCTGCCACCCTTGCCCCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373281.8
ENST00000463577.2
3UTR-3UTR TCA 90 bp GGAAGAAGGCGATTCGGGAGGCCACGGTCTTGCAGCCGTTGGAGGAGAAGAGCTCATGATGCCCGAGTTTaGGAAGCCATGGTGCGGGTT +
Preference number: 2 (lower is better)
Translates to: GRRRFGRPRSCSRWRRRAHDARV*EAMVRV
Trigger: AACCCGCACCATGGCTTCTCAAACTCGGGCATCATG...AGCTCTTCTCCTCCAACGGCTGCAAGACCGTGGCCTCCCGAATCGCCTTCTTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496460.5
3UTR-3UTR CCA 90 bp CCTGGCCATCTGTCCCGTGGCCTAGCCGACACTCCGTTCATCTCACTTGGTGCTTCTCACTTGGTGCTCTaGGTTCCTGTGACAGAGGCC +
Preference number: 2 (lower is better)
Translates to: PGHLSRGLADTPFISLGASHLVL*VPVTEA
Trigger: GGCCTCTGTCACAGGAACCCAGAGCACCAAGTGAGA...AGCACCAAGTGAGATGAACGGAGTGTCGGCTAGGCCACGGGACAGATGGCCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000373284.10
ENST00000463256.5
ENST00000463577.2
ENST00000496460.5
3UTR-3UTR CCA 90 bp CTCGCGGTCCCGCCGGCTGCGCCACGCCTCCAATGCCACCTGGTTGATCTGCTTGAAAACTTCTTGACCTaGCAGGGCTTCCACAAAGAA +
Preference number: 2 (lower is better)
Translates to: LAVPPAAPRLQCHLVDLLENFLT*QGFHKE
Trigger: TTCTTTGTGGAAGCCCTGCCAGGTCAAGAAGTTTTC...AAGCAGATCAACCAGGTGGCATTGGAGGCGTGGCGCAGCCGGCGGGACCGCGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373281.8
ENST00000463577.2
3UTR-3UTR CCA 90 bp GGAAGAAGGCGATTCGGGAGGCCACGGTCTTGCAGCCGTTGGAGGAGAAGAGCTCAGGAGGAAAAATGCTaGCCTCAGTTCCCTCAGCCG +
Preference number: 2 (lower is better)
Translates to: GRRRFGRPRSCSRWRRRAQEEKC*PQFPQP
Trigger: CGGCTGAGGGAACTGAGGCCAGCATTTTTCCTCCTG...AGCTCTTCTCCTCCAACGGCTGCAAGACCGTGGCCTCCCGAATCGCCTTCTTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373281.8
ENST00000463577.2
3UTR-3UTR TCA 90 bp TCAGAGAGTCAGAGGAAGAAGGCGATTCGGGAGGCCACGGTCTTGCAGCCGTTGGCCCAAGTGGCAGCTTaGGTCCCTCCATTTCTGGAA +
Preference number: 2 (lower is better)
Translates to: SESQRKKAIREATVLQPLAQVAA*VPPFLE
Trigger: TTCCAGAAATGGAGGGACTCAAGCTGCCACTTGGGC...CAACGGCTGCAAGACCGTGGCCTCCCGAATCGCCTTCTTCCTCTGACTCTCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000463577.2
3UTR-3UTR TCA 90 bp AGGAAAAATGCTGGCCTCAGTTCCCTCAGCCGCCTTCTGGGTGTAGGACTCAGGTTCCCCGCTGCCACCTaGCATAGGAACATGGCTCAG +
Preference number: 2 (lower is better)
Translates to: RKNAGLSSLSRLLGVGLRFPAAT*HRNMAQ
Trigger: CTGAGCCATGTTCCTATGTCAGGTGGCAGCGGGGAA...CCTGAGTCCTACACCCAGAAGGCGGCTGAGGGAACTGAGGCCAGCATTTTTCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373281.8
ENST00000463577.2
3UTR-3UTR GCA 90 bp GTGGCGGAGGGCACTGGGAAAGCCCAGCTAAGCCCATGGGGAACTGGATTCTGCTTGGAGGAGAAGAGCTaGTCGTCTTCAGGGAAGAAG +
Preference number: 2 (lower is better)
Translates to: VAEGTGKAQLSPWGTGFCLEEKS*SSSGKK
Trigger: CTTCTTCCCTGAAGACGAGCAGCTCTTCTCCTCCAA...GCAGAATCCAGTTCCCCATGGGCTTAGCTGGGCTTTCCCAGTGCCCTCCGCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463577.2
3UTR-3UTR GCA 90 bp GTCCCTCCATTTCTGGAAACTGAGAAGGCTCCACCTGGCTTGATATGGACACAGGCCCCTGGCCTTTCCTaGATGGCCTGGCCATCAGGG +
Preference number: 2 (lower is better)
Translates to: VPPFLETEKAPPGLIWTQAPGLS*MAWPSG
Trigger: CCCTGATGGCCAGGCCATGCAGGAAAGGCCAGGGGC...CTGTGTCCATATCAAGCCAGGTGGAGCCTTCTCAGTTTCCAGAAATGGAGGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000373284.10
ENST00000463577.2
3UTR-3UTR GCA 90 bp AGAGAGTCAGAGGAAGAAGGCGATTCGGGAGGCCACGGTCTTGCAGCCGTTGGATGGGGAACTGGATTCTaGTGGGAGCACAGGCTAAGG +
Preference number: 2 (lower is better)
Translates to: RESEEEGDSGGHGLAAVGWGTGF*WEHRLR
Trigger: CCTTAGCCTGTGCTCCCAGCAGAATCCAGTTCCCCA...TCCAACGGCTGCAAGACCGTGGCCTCCCGAATCGCCTTCTTCCTCTGACTCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463577.2
3UTR-3UTR CCA 90 bp ATCTCACTTGGTGCTCTGGGTTCCTGTGACAGAGGCCCCTGGCCTTTCCTGCATGCCTCCAATGCCACCTaGTTGATCTGCTTGCCACCC +
Preference number: 2 (lower is better)
Translates to: ISLGALGSCDRGPWPFLHASNAT*LICLPP
Trigger: GGGTGGCAAGCAGATCAACCAGGTGGCATTGGAGGC...ATGCAGGAAAGGCCAGGGGCCTCTGTCACAGGAACCCAGAGCACCAAGTGAGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373281.8
ENST00000463577.2
ENST00000496460.5
3UTR-3UTR CCA 90 bp AGAGAGTCAGAGGAAGAAGGCGATTCGGGAGGCCACGGTCTTGCAGCCGTTGGACAGGAGGAAAAATGCTaGCCTCAGTTCCCTCAGCCG +
Preference number: 2 (lower is better)
Translates to: RESEEEGDSGGHGLAAVGQEEKC*PQFPQP
Trigger: CGGCTGAGGGAACTGAGGCCAGCATTTTTCCTCCTG...TCCAACGGCTGCAAGACCGTGGCCTCCCGAATCGCCTTCTTCCTCTGACTCTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373281.8
ENST00000463577.2
3UTR-3UTR CCA 90 bp GGCACCACTGCGTCTAGGAGGCGCTCTTCCATGATGCCCGAGTTTGAGAAGCCACAGGAGGAAAAATGCTaGCCTCAGTTCCCTCAGCCG +
Preference number: 2 (lower is better)
Translates to: GTTASRRRSSMMPEFEKPQEEKC*PQFPQP
Trigger: CGGCTGAGGGAACTGAGGCCAGCATTTTTCCTCCTG...TGGCTTCTCAAACTCGGGCATCATGGAAGAGCGCCTCCTAGACGCAGTGGTGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373281.8
ENST00000463577.2
ENST00000493439.1
3UTR-3UTR CCA 90 bp AAGAAGGTGGTGCTGTCCAGCACAGCCTGGACAACCTCATCCCTTGGCTCCAGGTGCAGGAAGGGTAGGTaGGGAGGGGACTTTGTGCTT +
Preference number: 2 (lower is better)
Translates to: KKVVLSSTAWTTSSLGSRCRKGR*GGDFVL
Trigger: AAGCACAAAGTCCCCTCCCCACCTACCCTTCCTGCA...CCTGGAGCCAAGGGATGAGGTTGTCCAGGCTGTGCTGGACAGCACCACCTTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373281.8
ENST00000463577.2
3UTR-3UTR CCA 90 bp TCTCACTTGGTGCTCTGGGTTCCTGTGACAGAGGCCCCTGGCCTTTCCTGCATGAAGCCCATGGGGAACTaGATTCTGCTGGGAGCACAG +
Preference number: 2 (lower is better)
Translates to: SHLVLWVPVTEAPGLSCMKPMGN*ILLGAQ
Trigger: CTGTGCTCCCAGCAGAATCCAGTTCCCCATGGGCTT...CATGCAGGAAAGGCCAGGGGCCTCTGTCACAGGAACCCAGAGCACCAAGTGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000463577.2
3UTR-3UTR CCA 90 bp CGCCTTCTGGGTGTAGGACTCAGGGGCTGTAAGGCTCACCCAAAGTCACAAAGCGCCCAGCTAAGCCCATaGGGAACTGGATTCTGCTGG +
Preference number: 2 (lower is better)
Translates to: RLLGVGLRGCKAHPKSQSAQLSP*GTGFCW
Trigger: CCAGCAGAATCCAGTTCCCCATGGGCTTAGCTGGGC...GCTTTGTGACTTTGGGTGAGCCTTACAGCCCCTGAGTCCTACACCCAGAAGGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463577.2
3UTR CAA 90 bp GACTTTCCCTCACTGAACTTCCAGGAAGGCATCGGGGCATCATTATaGGCCCCGCTGTTCAGAAGCAGAGACAGAGGCTCAGAGAGGCGG +
Preference number: 2 (lower is better)
Translates to: DFPSLNFQEGIGASL*APLFRSRDRGSERR
Trigger: CCGCCTCTCTGAGCCTCTGTCTCTGCTTCTGAACAGCGGGGCCAATAATGATGCCCCGATGCCTTCCTGGAAGTTCAGTGAGGGAAAGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373281.8
ENST00000463577.2
3UTR-3UTR TCA 90 bp AAGAAGGTGGTGCTGTCCAGCACAGCCTGGACAACCTCATCCCTTGGCTCCAGGAGAGGGAAAACTTCTTaGCCTGGCAGGGCTTCCACA +
Preference number: 2 (lower is better)
Translates to: KKVVLSSTAWTTSSLGSRRGKTS*PGRAST
Trigger: TGTGGAAGCCCTGCCAGGTCAAGAAGTTTTCCCTCT...CCTGGAGCCAAGGGATGAGGTTGTCCAGGCTGTGCTGGACAGCACCACCTTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373281.8
ENST00000463577.2
3UTR-3UTR TCA 90 bp GCTGCTCGTCTTCAGGGAAGAAGGTGGTGCTGTCCAGCACAGCCTGGACAACCTAGAGGGAAAACTTCTTaGCCTGGCAGGGCTTCCACA +
Preference number: 2 (lower is better)
Translates to: AARLQGRRWCCPAQPGQPRGKTS*PGRAST
Trigger: TGTGGAAGCCCTGCCAGGTCAAGAAGTTTTCCCTCT...AGGTTGTCCAGGCTGTGCTGGACAGCACCACCTTCTTCCCTGAAGACGAGCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373281.8
ENST00000463577.2
3UTR-3UTR TCA 90 bp TCTAGGAGGCGCTCTTCCATGATGCCCGAGTTTGAGAAGCCATCTGCAGGAAGGCGGAGCCATGCTGCCTaGGGAAACACAGCGAGGATT +
Preference number: 2 (lower is better)
Translates to: SRRRSSMMPEFEKPSAGRRSHAA*GNTARI
Trigger: AATCCTCGCTGTGTTTCCTCAGGCAGCATGGCTCCG...CCTTCCTGCAGATGGCTTCTCAAACTCGGGCATCATGGAAGAGCGCCTCCTAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373281.8
ENST00000463577.2
3UTR-3UTR TCA 90 bp ACCAGGCCCAAGTGGCAGCTTGAGTCCCTCCATTTCTGGAAACTGAGAAGGCTCCGGAGCCATGCTGCCTaGGGAAACACAGCGAGGATT +
Preference number: 2 (lower is better)
Translates to: TRPKWQLESLHFWKLRRLRSHAA*GNTARI
Trigger: AATCCTCGCTGTGTTTCCTCAGGCAGCATGGCTCCG...GAGCCTTCTCAGTTTCCAGAAATGGAGGGACTCAAGCTGCCACTTGGGCCTGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373281.8
ENST00000463577.2
3UTR-3UTR CCA 90 bp AGGAGAAGAGCTGCTCGTCTTCAGGGAAGAAGGTGGTGCTGTCCAGCACAGCCTCTTCAGGGAAGAAGGTaGTGCTGTCCAGCACAGCCT +
Preference number: 2 (lower is better)
Translates to: RRRAARLQGRRWCCPAQPLQGRR*CCPAQP
Trigger: AGGCTGTGCTGGACAGCACCACCTTCTTCCCTGAAG...AGGCTGTGCTGGACAGCACCACCTTCTTCCCTGAAGACGAGCAGCTCTTCTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000463256.5
ENST00000463577.2
ENST00000496460.5
3UTR-3UTR CCA 90 bp TGCTCGTCTTCAGGGAAGAAGGTGGTGCTGTCCAGCACAGCCTGGACAACCTCATCTCACTTGGTGCTCTaGGTTCCTGTGACAGAGGCC +
Preference number: 2 (lower is better)
Translates to: CSSSGKKVVLSSTAWTTSSHLVL*VPVTEA
Trigger: GGCCTCTGTCACAGGAACCCAGAGCACCAAGTGAGA...TGAGGTTGTCCAGGCTGTGCTGGACAGCACCACCTTCTTCCCTGAAGACGAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373281.8
ENST00000463256.5
ENST00000463577.2
ENST00000496460.5
3UTR-3UTR CCA 90 bp AAGTGGCAGCTTGAGTCCCTCCATTTCTGGAAACTGAGAAGGCTCCACCTGGCTTGGCCATCTGTCCCGTaGCCTAGCCGACACTCCGTT +
Preference number: 2 (lower is better)
Translates to: KWQLESLHFWKLRRLHLAWPSVP*PSRHSV
Trigger: AACGGAGTGTCGGCTAGGCCACGGGACAGATGGCCA...AGCCAGGTGGAGCCTTCTCAGTTTCCAGAAATGGAGGGACTCAAGCTGCCACTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000373284.10
ENST00000463577.2
3UTR-3UTR CCA 90 bp AAGTGGCAGCTTGAGTCCCTCCATTTCTGGAAACTGAGAAGGCTCCACCTGGCTGGCTCAGTGAGGTTCTaGGGTGACCAGGGGTTTCCC +
Preference number: 2 (lower is better)
Translates to: KWQLESLHFWKLRRLHLAGSVRF*GDQGFP
Trigger: GGGAAACCCCTGGTCACCCCAGAACCTCACTGAGCC...AGCCAGGTGGAGCCTTCTCAGTTTCCAGAAATGGAGGGACTCAAGCTGCCACTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000373284.10
ENST00000463577.2
3UTR-3UTR CCA 90 bp AGACAGAGGCTCAGAGAGGCGGAGCCATGCTGCCTGAGGAAACACAGCGAGGATTGGCTTTGCGGTAATTaGTCCCGTATACCACCCAGG +
Preference number: 2 (lower is better)
Translates to: RQRLREAEPCCLRKHSEDWLCGN*SRIPPR
Trigger: CCTGGGTGGTATACGGGACCAATTACCGCAAAGCCA...ATCCTCGCTGTGTTTCCTCAGGCAGCATGGCTCCGCCTCTCTGAGCCTCTGTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463577.2
3UTR-3UTR CCA 90 bp GGCACCACTGCGTCTAGGAGGCGCTCTTCCATGATGCCCGAGTTTGAGAAGCCATGGCTTTGCGGTAATTaGTCCCGTATACCACCCAGG +
Preference number: 2 (lower is better)
Translates to: GTTASRRRSSMMPEFEKPWLCGN*SRIPPR
Trigger: CCTGGGTGGTATACGGGACCAATTACCGCAAAGCCA...TGGCTTCTCAAACTCGGGCATCATGGAAGAGCGCCTCCTAGACGCAGTGGTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000463256.5
ENST00000463577.2
ENST00000493439.1
ENST00000496460.5
3UTR-3UTR TCA 90 bp ATCTCACTTGGTGCTCTGGGTTCCTGTGACAGAGGCCCCTGGCCTTTCCTGCATACACAGCGAGGATTCTaGGAGCTGGGACTAAAGGAC +
Preference number: 2 (lower is better)
Translates to: ISLGALGSCDRGPWPFLHTQRGF*ELGLKD
Trigger: GTCCTTTAGTCCCAGCTCTCAGAATCCTCGCTGTGT...ATGCAGGAAAGGCCAGGGGCCTCTGTCACAGGAACCCAGAGCACCAAGTGAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373281.8
ENST00000463577.2
3UTR-3UTR GCA 90 bp AGGAAAAATGCTGGCCTCAGTTCCCTCAGCCGCCTTCTGGGTGTAGGACTCAGGTCACAAAGCTGGGAGTaGCAAAGCCAGGCTCAGAAC +
Preference number: 2 (lower is better)
Translates to: RKNAGLSSLSRLLGVGLRSQSWE*QSQAQN
Trigger: GTTCTGAGCCTGGCTTTGGCACTCCCAGCTTTGTGA...CCTGAGTCCTACACCCAGAAGGCGGCTGAGGGAACTGAGGCCAGCATTTTTCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373281.8
ENST00000463577.2
ENST00000493439.1
3UTR-3UTR CCA 90 bp GGGCAGGATTGGACCCTCGCTTCCCCGCTGCCACCTGACATAGGAACATGGCTCGAAAACTTCTTGACCTaGCAGGGCTTCCACAAAGAA +
Preference number: 2 (lower is better)
Translates to: GQDWTLASPLPPDIGTWLENFLT*QGFHKE
Trigger: TTCTTTGTGGAAGCCCTGCCAGGTCAAGAAGTTTTC...GAGCCATGTTCCTATGTCAGGTGGCAGCGGGGAAGCGAGGGTCCAATCCTGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373281.8
ENST00000463577.2
3UTR-3UTR TCA 90 bp CGCCTTCTGGGTGTAGGACTCAGGGGCTGTAAGGCTCACCCAAAGTCACAAAGCTCCATTTCTGGAAACTaGGAAGGCTCCACCTGGCTT +
Preference number: 2 (lower is better)
Translates to: RLLGVGLRGCKAHPKSQSSISGN*EGSTWL
Trigger: AAGCCAGGTGGAGCCTTCTCAGTTTCCAGAAATGGA...GCTTTGTGACTTTGGGTGAGCCTTACAGCCCCTGAGTCCTACACCCAGAAGGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373281.8
ENST00000463577.2
3UTR-3UTR TCA 90 bp GAAAAATGCTGGCCTCAGTTCCCTCAGCCGCCTTCTGGGTGTAGGACTCAGGGGGGCGATCAAAAAGACTaGGCCCAGAATTTGCTGAGA +
Preference number: 2 (lower is better)
Translates to: EKCWPQFPQPPSGCRTQGGDQKD*AQNLLR
Trigger: TCTCAGCAAATTCTGGGCTCAGTCTTTTTGATCGCC...CCCCTGAGTCCTACACCCAGAAGGCGGCTGAGGGAACTGAGGCCAGCATTTTTC
54% GC, longest homopolymer 6 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000373281.8
ENST00000463577.2
3UTR-3UTR GCA 90 bp AGGAGAAGAGCTGCTCGTCTTCAGGGAAGAAGGTGGTGCTGTCCAGCACAGCCTTTGGAGGAGAAGAGCTaGTCGTCTTCAGGGAAGAAG +
Preference number: 2 (lower is better)
Translates to: RRRAARLQGRRWCCPAQPLEEKS*SSSGKK
Trigger: CTTCTTCCCTGAAGACGAGCAGCTCTTCTCCTCCAA...AGGCTGTGCTGGACAGCACCACCTTCTTCCCTGAAGACGAGCAGCTCTTCTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000463256.5
ENST00000463577.2
ENST00000496460.5
3UTR-3UTR GCA 90 bp CCATTTCTGGAAACTGAGAAGGCTCCACCTGGCTTGATATGGACACAGGGTGTGTGGCCGGGGCCAAGATaGTCTCGAGCCAGTTTAGAG +
Preference number: 2 (lower is better)
Translates to: PFLETEKAPPGLIWTQGVWPGPR*SRASLE
Trigger: CTCTAAACTGGCTCGAGAGCATCTTGGCCCCGGCCA...CACACCCTGTGTCCATATCAAGCCAGGTGGAGCCTTCTCAGTTTCCAGAAATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000373284.10
ENST00000463577.2
3UTR-3UTR GCA 90 bp AAGTGGCAGCTTGAGTCCCTCCATTTCTGGAAACTGAGAAGGCTCCACCTGGCTGCCACCTGGTTGATCTaGTTGCCACCCGTGTTGCTA +
Preference number: 2 (lower is better)
Translates to: KWQLESLHFWKLRRLHLAATWLI*LPPVLL
Trigger: TAGCAACACGGGTGGCAAGCAGATCAACCAGGTGGC...AGCCAGGTGGAGCCTTCTCAGTTTCCAGAAATGGAGGGACTCAAGCTGCCACTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373281.8
ENST00000463577.2
3UTR-3UTR TCA 90 bp TCAGAGAGTCAGAGGAAGAAGGCGATTCGGGAGGCCACGGTCTTGCAGCCGTTGACGAGCCACAGTCCCTaGGTTATAATTCACAGTAAG +
Preference number: 2 (lower is better)
Translates to: SESQRKKAIREATVLQPLTSHSP*VIIHSK
Trigger: CTTACTGTGAATTATAACTCAGGGACTGTGGCTCGT...CAACGGCTGCAAGACCGTGGCCTCCCGAATCGCCTTCTTCCTCTGACTCTCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000463577.2
3UTR-3UTR GCA 90 bp TCTAAAACCAGGCCCAAGTGGCAGCTTGAGTCCCTCCATTTCTGGAAACTGAGATGGCCGGGGCCAAGATaGTCTCGAGCCAGTTTAGAG +
Preference number: 2 (lower is better)
Translates to: SKTRPKWQLESLHFWKLRWPGPR*SRASLE
Trigger: CTCTAAACTGGCTCGAGAGCATCTTGGCCCCGGCCA...TCTCAGTTTCCAGAAATGGAGGGACTCAAGCTGCCACTTGGGCCTGGTTTTAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000373284.10
ENST00000463577.2
3UTR-3UTR GCA 90 bp AAGTGGCAGCTTGAGTCCCTCCATTTCTGGAAACTGAGAAGGCTCCACCTGGCTTCACAAAGCTGGGAGTaGCAAAGCCAGGCTCAGAAC +
Preference number: 2 (lower is better)
Translates to: KWQLESLHFWKLRRLHLASQSWE*QSQAQN
Trigger: GTTCTGAGCCTGGCTTTGGCACTCCCAGCTTTGTGA...AGCCAGGTGGAGCCTTCTCAGTTTCCAGAAATGGAGGGACTCAAGCTGCCACTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373281.8
ENST00000463577.2
3UTR-3UTR CCA 90 bp AAGTGGCAGCTTGAGTCCCTCCATTTCTGGAAACTGAGAAGGCTCCACCTGGCTAAAACCAGGCCCAAGTaGCAGCTTGAGTCCCTCCAT +
Preference number: 2 (lower is better)
Translates to: KWQLESLHFWKLRRLHLAKTRPK*QLESLH
Trigger: ATGGAGGGACTCAAGCTGCCACTTGGGCCTGGTTTT...AGCCAGGTGGAGCCTTCTCAGTTTCCAGAAATGGAGGGACTCAAGCTGCCACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000373284.10
ENST00000463577.2
3UTR-3UTR CCA 90 bp AAGTGGCAGCTTGAGTCCCTCCATTTCTGGAAACTGAGAAGGCTCCACCTGGCTGAGTCCCTCCATTTCTaGAAACTGAGAAGGCTCCAC +
Preference number: 2 (lower is better)
Translates to: KWQLESLHFWKLRRLHLAESLHF*KLRRLH
Trigger: GTGGAGCCTTCTCAGTTTCCAGAAATGGAGGGACTC...AGCCAGGTGGAGCCTTCTCAGTTTCCAGAAATGGAGGGACTCAAGCTGCCACTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000373284.10
ENST00000463577.2
3UTR-3UTR TCA 90 bp ACCAGGCCCAAGTGGCAGCTTGAGTCCCTCCATTTCTGGAAACTGAGAAGGCTCACGAGCCACAGTCCCTaGGTTATAATTCACAGTAAG +
Preference number: 2 (lower is better)
Translates to: TRPKWQLESLHFWKLRRLTSHSP*VIIHSK
Trigger: CTTACTGTGAATTATAACTCAGGGACTGTGGCTCGT...GAGCCTTCTCAGTTTCCAGAAATGGAGGGACTCAAGCTGCCACTTGGGCCTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000373284.10
ENST00000463577.2
3UTR-3UTR TCA 90 bp TCCTCACCACAAAAGAGGGAAAACTTCTTGACCTGGCAGGGCTTCCACAAAGAACTGACTTTCCCTCACTaGACTTCCAGGAAGGCATCG +
Preference number: 2 (lower is better)
Translates to: SSPQKRENFLTWQGFHKELTFPH*TSRKAS
Trigger: CGATGCCTTCCTGGAAGTTCAGTGAGGGAAAGTCAG...TTCTTTGTGGAAGCCCTGCCAGGTCAAGAAGTTTTCCCTCTTTTGTGGTGAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373281.8
ENST00000463577.2
3UTR-3UTR CCA 90 bp AAATTAAAAACATCTAAAACCAGGCCCAAGTGGCAGCTTGAGTCCCTCCATTTCTTTCCCTGGGGAAGGTaGCCGGGGCCAAGATGCTCT +
Preference number: 2 (lower is better)
Translates to: KLKTSKTRPKWQLESLHFFPWGR*PGPRCS
Trigger: AGAGCATCTTGGCCCCGGCCACCTTCCCCAGGGAAA...GAAATGGAGGGACTCAAGCTGCCACTTGGGCCTGGTTTTAGATGTTTTTAATTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000373284.10
ENST00000463577.2
3UTR-3UTR CCA 90 bp CCATTTCTGGAAACTGAGAAGGCTCCACCTGGCTTGATATGGACACAGGGTGTGGCTTCCACAAAGAAGTaGCGATCAAAAAGACTGAGC +
Preference number: 2 (lower is better)
Translates to: PFLETEKAPPGLIWTQGVASTKK*RSKRLS
Trigger: GCTCAGTCTTTTTGATCGCCACTTCTTTGTGGAAGC...CACACCCTGTGTCCATATCAAGCCAGGTGGAGCCTTCTCAGTTTCCAGAAATGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373281.8
ENST00000463577.2
3UTR GCA 72 bp GCTGCCCGGGAGGGGGCTGCTGAGCCAGACTCACGGTaGGGGTTGTCCAGCACCGCGCGGGAGATGACCGGC +
Preference number: 3 (lower is better)
Translates to: AAREGAAEPDSR*GLSSTAREMTG
Trigger: GCCGGTCATCTCCCGCGCGGTGCTGGACAACCCGCACCGTGAGTCTGGCTCAGCAGCCCCCTCCCGGGCAGC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373281.8
ENST00000463577.2
ENST00000493439.1
3UTR GCA 72 bp TCCAGGCCCAGCTGGGCCAGCTCGTTGAGCACGCAGTaGCGGACGTGGTGCCGCTGGAGCGGGAGGAAGGGC +
Preference number: 3 (lower is better)
Translates to: SRPSWASSLSTQ*RTWCRWSGRKG
Trigger: GCCCTTCCTCCCGCTCCAGCGGCACCACGTCCGGCACTGCGTGCTCAACGAGCTGGCCCAGCTGGGCCTGGA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373281.8
ENST00000463256.5
ENST00000463577.2
ENST00000496460.5
3UTR-3UTR CAA 90 bp GGTGCCGCTGGAGCGGGAGGAAGGGCACCACTGCGTCTAGGAGGCGCTCTTCCAGACTCACGGTGCGGGTaGTCCAGCACCGCGCGGGAG +
Preference number: 3 (lower is better)
Translates to: GAAGAGGRAPLRLGGALPDSRCG*SSTARE
Trigger: CTCCCGCGCGGTGCTGGACAACCCGCACCGTGAGTC...TGGAAGAGCGCCTCCTAGACGCAGTGGTGCCCTTCCTCCCGCTCCAGCGGCACC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373281.8
ENST00000463577.2
ENST00000493439.1
3UTR-3UTR CAA 90 bp CCGGCTCCAGCTCCTGCAGGAGGATCTCCTCGCGGTCCCGCCGGCTGCGCCACGTCCAATGCCACCTGGTaGATCTGCTTGCCACCCGTG +
Preference number: 3 (lower is better)
Translates to: PAPAPAGGSPRGPAGCATSNATW*ICLPPV
Trigger: CACGGGTGGCAAGCAGATCAACCAGGTGGCATTGGA...CGTGGCGCAGCCGGCGGGACCGCGAGGAGATCCTCCTGCAGGAGCTGGAGCCGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373281.8
ENST00000463577.2
ENST00000493439.1
ENST00000496460.5
3UTR TCA 72 bp GCCAGGCTCAGAACTGCCGGGTCAGTGGGCAAAGCATaGGACCCCGGGAGAGCCTGGCCCCTGGGTGTGGGG +
Preference number: 3 (lower is better)
Translates to: ARLRTAGSVGKA*DPGRAWPLGVG
Trigger: CCCCACACCCAGGGGCCAGGCTCTCCCGGGGTCTCATGCTTTGCCCACTGACCCGGCAGTTCTGAGCCTGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373281.8
ENST00000463577.2
ENST00000493439.1
3UTR GCA 72 bp TGGGCCAGCTCGTTGAGCACGCAGTGCCGGACGTGGTaGCGCTGGAGCGGGAGGAAGGGCACCACTGCGTCT +
Preference number: 3 (lower is better)
Translates to: WASSLSTQCRTW*RWSGRKGTTAS
Trigger: AGACGCAGTGGTGCCCTTCCTCCCGCTCCAGCGGCACCACGTCCGGCACTGCGTGCTCAACGAGCTGGCCCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373281.8
ENST00000463256.5
ENST00000463577.2
ENST00000496460.5
3UTR TCA 72 bp ACTCACGGTGCGGGTTGTCCAGCACCGCGCGGGAGATaGCCGGCTCCAGCTCCTGCAGGAGGATCTCCTCGC +
Preference number: 3 (lower is better)
Translates to: THGAGCPAPRGR*PAPAPAGGSPR
Trigger: GCGAGGAGATCCTCCTGCAGGAGCTGGAGCCGGTCATCTCCCGCGCGGTGCTGGACAACCCGCACCGTGAGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373281.8
ENST00000463577.2
ENST00000493439.1
3UTR TCA 72 bp AGCCATGGTGCGGGTTGTCCAGCACCGCGCGGGAGATaGCCGGCTCCAGCTCCTGCAGGAGGATCTCCTCGC +
Preference number: 3 (lower is better)
Translates to: SHGAGCPAPRGR*PAPAPAGGSPR
Trigger: GCGAGGAGATCCTCCTGCAGGAGCTGGAGCCGGTCATCTCCCGCGCGGTGCTGGACAACCCGCACCATGGCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496460.5
3UTR GCA 72 bp CTCCTCGCGGTCCCGCCGGCTGCGCCACGCCTCCAATaGCACCTGGTTGATCTGCTTGCCACCCGTGTTGCT +
Preference number: 3 (lower is better)
Translates to: LLAVPPAAPRLQ*HLVDLLATRVA
Trigger: AGCAACACGGGTGGCAAGCAGATCAACCAGGTGGCATTGGAGGCGTGGCGCAGCCGGCGGGACCGCGAGGAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373281.8
ENST00000463577.2
ENST00000493439.1
ENST00000496460.5
3UTR CCA 72 bp GGTATGGTGCCCGACCAAGGAGGCAAGGGGCAAGGGTaGCAGACTGAGGAGGGAGCACCGCCACGAGCCACA +
Preference number: 3 (lower is better)
Translates to: GMVPDQGGKGQG*QTEEGAPPRAT
Trigger: TGTGGCTCGTGGCGGTGCTCCCTCCTCAGTCTGCCACCCTTGCCCCTTGCCTCCTTGGTCGGGCACCATACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000373284.10
ENST00000463577.2
3UTR-3UTR CAA 90 bp AAGGTGGCCGGGGCCAAGATGCTCTCGAGCCAGTTTAGAGGCCAGGGCCCTTCCCGGGAGGCCACGGTCTaGCAGCCGTTGGAGGAGAAG +
Preference number: 3 (lower is better)
Translates to: KVAGAKMLSSQFRGQGPSREATV*QPLEEK
Trigger: CTTCTCCTCCAACGGCTGCAAGACCGTGGCCTCCCG...GGAAGGGCCCTGGCCTCTAAACTGGCTCGAGAGCATCTTGGCCCCGGCCACCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000463256.5
ENST00000463577.2
ENST00000496460.5
3UTR CCA 72 bp CGGTCCCGCCGGCTGCGCCACGCCTCCAATGCCACCTaGTTGATCTGCTTGCCACCCGTGTTGCTGATGAAG +
Preference number: 3 (lower is better)
Translates to: RSRRLRHASNAT*LICLPPVLLMK
Trigger: CTTCATCAGCAACACGGGTGGCAAGCAGATCAACCAGGTGGCATTGGAGGCGTGGCGCAGCCGGCGGGACCG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000493439.1
ENST00000496460.5
3UTR-3UTR CAA 90 bp GTTTCCCTGGGGAAGGTGGCCGGGGCCAAGATGCTCTCGAGCCAGTTTAGAGGCCGGGAGGCCACGGTCTaGCAGCCGTTGGAGGAGAAG +
Preference number: 3 (lower is better)
Translates to: VSLGKVAGAKMLSSQFRGREATV*QPLEEK
Trigger: CTTCTCCTCCAACGGCTGCAAGACCGTGGCCTCCCG...GCCTCTAAACTGGCTCGAGAGCATCTTGGCCCCGGCCACCTTCCCCAGGGAAAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000463256.5
ENST00000463577.2
3UTR-3UTR CAA 90 bp GGGTTTCCCTGGGGAAGGTGGCCGGGGCCAAGATGCTCTCGAGCCAGTTTAGAGCGGGAGGCCACGGTCTaGCAGCCGTTGGAGGAGAAG +
Preference number: 3 (lower is better)
Translates to: GFPWGRWPGPRCSRASLEREATV*QPLEEK
Trigger: CTTCTCCTCCAACGGCTGCAAGACCGTGGCCTCCCG...CTCTAAACTGGCTCGAGAGCATCTTGGCCCCGGCCACCTTCCCCAGGGAAACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000463256.5
ENST00000463577.2
3UTR-3UTR CAA 90 bp CACTTGGTGCTCTGGGTTCCTGTGACAGAGGCCCCTGGCCTTTCCTGCATGGCCCGGGAGGCCACGGTCTaGCAGCCGTTGGAGGAGAAG +
Preference number: 3 (lower is better)
Translates to: HLVLWVPVTEAPGLSCMAREATV*QPLEEK
Trigger: CTTCTCCTCCAACGGCTGCAAGACCGTGGCCTCCCG...GGCCATGCAGGAAAGGCCAGGGGCCTCTGTCACAGGAACCCAGAGCACCAAGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000463256.5
ENST00000463577.2
ENST00000496460.5
3UTR CCA 72 bp CGGTCCCGCCGGCTGCGCCACGCCTCCAATGCCACCTaGTTGATCTGCTTGCCACCCGTGTTGCTAAAACCA +
Preference number: 3 (lower is better)
Translates to: RSRRLRHASNAT*LICLPPVLLKP
Trigger: TGGTTTTAGCAACACGGGTGGCAAGCAGATCAACCAGGTGGCATTGGAGGCGTGGCGCAGCCGGCGGGACCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373281.8
ENST00000463577.2
3UTR-3UTR CAA 90 bp CTGGGTGTAGGACTCAGGGGCTGTAAGGCTCACCCAAAGTCACAAAGCTGGGAGGACTCACGGTGCGGGTaGTCCAGCACCGCGCGGGAG +
Preference number: 3 (lower is better)
Translates to: LGVGLRGCKAHPKSQSWEDSRCG*SSTARE
Trigger: CTCCCGCGCGGTGCTGGACAACCCGCACCGTGAGTC...CTCCCAGCTTTGTGACTTTGGGTGAGCCTTACAGCCCCTGAGTCCTACACCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373281.8
ENST00000463577.2
ENST00000493439.1
3UTR-3UTR CAA 90 bp CAGGGAAGAAGGTGGTGCTGTCCAGCACAGCCTGGACAACCTCATCCCTTGGCTAGCTGGGCCAGCTCGTaGAGCACGCAGTGCCGGACG +
Preference number: 3 (lower is better)
Translates to: QGRRWCCPAQPGQPHPLASWASS*STQCRT
Trigger: CGTCCGGCACTGCGTGCTCAACGAGCTGGCCCAGCT...AGCCAAGGGATGAGGTTGTCCAGGCTGTGCTGGACAGCACCACCTTCTTCCCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373281.8
ENST00000463256.5
ENST00000463577.2
ENST00000496460.5
3UTR-3UTR CAA 90 bp TCCTGCAGGAGGATCTCCTCGCGGTCCCGCCGGCTGCGCCACGCCTCCAATGCCTGCTTGCCACCCGTGTaGCTGATGAAGATGAAGATG +
Preference number: 3 (lower is better)
Translates to: SCRRISSRSRRLRHASNACLPPV*LMKMKM
Trigger: CATCTTCATCTTCATCAGCAACACGGGTGGCAAGCA...GGCATTGGAGGCGTGGCGCAGCCGGCGGGACCGCGAGGAGATCCTCCTGCAGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000493439.1
ENST00000496460.5
3UTR-3UTR CAA 90 bp GGGAAGGTGGCCGGGGCCAAGATGCTCTCGAGCCAGTTTAGAGGCCAGGGCCCTACCTGGTTGATCTGCTaGCCACCCGTGTTGCTGATG +
Preference number: 3 (lower is better)
Translates to: GKVAGAKMLSSQFRGQGPTWLIC*PPVLLM
Trigger: CATCAGCAACACGGGTGGCAAGCAGATCAACCAGGT...AGGGCCCTGGCCTCTAAACTGGCTCGAGAGCATCTTGGCCCCGGCCACCTTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496460.5
3UTR GCA 72 bp CGGCTGCGCCACGCCTCCAATGCCACCTGGTTGATCTaGTTGCCACCCGTGTTGCTAAAACCATGGGGGACC +
Preference number: 3 (lower is better)
Translates to: RLRHASNATWLI*LPPVLLKPWGT
Trigger: GGTCCCCCATGGTTTTAGCAACACGGGTGGCAAGCAGATCAACCAGGTGGCATTGGAGGCGTGGCGCAGCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373281.8
ENST00000463577.2
3UTR CCA 72 bp GTGGCGGAGGGCACTGGGAAAGCCCAGCTAAGCCCATaGGGAACTGGATTCTGCTGGGAGCACAGGCTAAGG +
Preference number: 3 (lower is better)
Translates to: VAEGTGKAQLSP*GTGFCWEHRLR
Trigger: CCTTAGCCTGTGCTCCCAGCAGAATCCAGTTCCCCATGGGCTTAGCTGGGCTTTCCCAGTGCCCTCCGCCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463577.2
3UTR-3UTR CAA 90 bp GGGGGCCGAGGACACCACTCAGAGAGTCAGAGGAAGAAGGCGATTCGGGAGGCCAAGGCTCCACCTGGCTaGATATGGACACAGGGTGTG +
Preference number: 3 (lower is better)
Translates to: GGRGHHSESQRKKAIREAKAPPG*IWTQGV
Trigger: CACACCCTGTGTCCATATCAAGCCAGGTGGAGCCTT...GGCCTCCCGAATCGCCTTCTTCCTCTGACTCTCTGAGTGGTGTCCTCGGCCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000463577.2
3UTR CCA 72 bp TTTAGAGGCCAGGGCCCTTCCTGGCCATCTGTCCCGTaGCCTAGCCGACACTCCGTTCATCTCACTTGGTGC +
Preference number: 3 (lower is better)
Translates to: FRGQGPSWPSVP*PSRHSVHLTWC
Trigger: GCACCAAGTGAGATGAACGGAGTGTCGGCTAGGCCACGGGACAGATGGCCAGGAAGGGCCCTGGCCTCTAAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000373284.10
ENST00000463256.5
ENST00000463577.2
ENST00000496460.5
3UTR TCA 72 bp GGAAGGGCACCACTGCGTCTAGGAGGCGCTCTTCCATaGTGCCCGAGTTTGAGAAGCCATCTGCAGGAAGGG +
Preference number: 3 (lower is better)
Translates to: GRAPLRLGGALP*CPSLRSHLQEG
Trigger: CCCTTCCTGCAGATGGCTTCTCAAACTCGGGCATCATGGAAGAGCGCCTCCTAGACGCAGTGGTGCCCTTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373281.8
ENST00000463577.2
ENST00000493439.1
3UTR TCA 72 bp GGAAGGGCACCACTGCGTCTAGGAGGCGCTCTTCCATaGTGCCCGAGTTTGAGAAGCCATGGTGCGGGTTGT +
Preference number: 3 (lower is better)
Translates to: GRAPLRLGGALP*CPSLRSHGAGC
Trigger: ACAACCCGCACCATGGCTTCTCAAACTCGGGCATCATGGAAGAGCGCCTCCTAGACGCAGTGGTGCCCTTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496460.5
3UTR GCA 72 bp GTCAGAGGAAGAAGGCGATTCGGGAGGCCACGGTCTTaGAGCCGTTGGAGGAGAAGAGCTGCTCGTCTTCAG +
Preference number: 3 (lower is better)
Translates to: VRGRRRFGRPRS*SRWRRRAARLQ
Trigger: CTGAAGACGAGCAGCTCTTCTCCTCCAACGGCTGCAAGACCGTGGCCTCCCGAATCGCCTTCTTCCTCTGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000463256.5
ENST00000463577.2
ENST00000496460.5
3UTR CCA 72 bp AGAAGGCGATTCGGGAGGCCACGGTCTTGCAGCCGTTaGAGGAGAAGAGCTGCTCGTCTTCAGGGAAGAAGG +
Preference number: 3 (lower is better)
Translates to: RRRFGRPRSCSR*RRRAARLQGRR
Trigger: CCTTCTTCCCTGAAGACGAGCAGCTCTTCTCCTCCAACGGCTGCAAGACCGTGGCCTCCCGAATCGCCTTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000463256.5
ENST00000463577.2
ENST00000496460.5
3UTR CCA 72 bp CTCAGGGGCTGTAAGGCTCACCCAAAGTCACAAAGCTaGGAGTGCCAAAGCCAGGCTCAGAACTGCCGGGTC +
Preference number: 3 (lower is better)
Translates to: LRGCKAHPKSQS*ECQSQAQNCRV
Trigger: GACCCGGCAGTTCTGAGCCTGGCTTTGGCACTCCCAGCTTTGTGACTTTGGGTGAGCCTTACAGCCCCTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373281.8
ENST00000463577.2
ENST00000493439.1
3UTR-3UTR CAA 90 bp CCTGGCCATCTGTCCCGTGGCCTAGCCGACACTCCGTTCATCTCACTTGGTGCTAAGGCTCCACCTGGCTaGATATGGACACAGGGTGTG +
Preference number: 3 (lower is better)
Translates to: PGHLSRGLADTPFISLGAKAPPG*IWTQGV
Trigger: CACACCCTGTGTCCATATCAAGCCAGGTGGAGCCTT...AGCACCAAGTGAGATGAACGGAGTGTCGGCTAGGCCACGGGACAGATGGCCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000373284.10
ENST00000463577.2
3UTR-3UTR CAA 90 bp GTTTCCCTGGGGAAGGTGGCCGGGGCCAAGATGCTCTCGAGCCAGTTTAGAGGCAAGAGGGAAAACTTCTaGACCTGGCAGGGCTTCCAC +
Preference number: 3 (lower is better)
Translates to: VSLGKVAGAKMLSSQFRGKRENF*TWQGFH
Trigger: GTGGAAGCCCTGCCAGGTCAAGAAGTTTTCCCTCTT...GCCTCTAAACTGGCTCGAGAGCATCTTGGCCCCGGCCACCTTCCCCAGGGAAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373281.8
ENST00000463577.2
3UTR GCA 72 bp CGGCTGCGCCACGCCTCCAATGCCACCTGGTTGATCTaGTTGCCACCCGTGTTGCTGATGAAGATGAAGATG +
Preference number: 3 (lower is better)
Translates to: RLRHASNATWLI*LPPVLLMKMKM
Trigger: CATCTTCATCTTCATCAGCAACACGGGTGGCAAGCAGATCAACCAGGTGGCATTGGAGGCGTGGCGCAGCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000493439.1
ENST00000496460.5
3UTR-3UTR CAA 90 bp TGCTCGTCTTCAGGGAAGAAGGTGGTGCTGTCCAGCACAGCCTGGACAACCTCACTCCGTTCATCTCACTaGGTGCTCTGGGTTCCTGTG +
Preference number: 3 (lower is better)
Translates to: CSSSGKKVVLSSTAWTTSLRSSH*VLWVPV
Trigger: CACAGGAACCCAGAGCACCAAGTGAGATGAACGGAG...TGAGGTTGTCCAGGCTGTGCTGGACAGCACCACCTTCTTCCCTGAAGACGAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373281.8
ENST00000463256.5
ENST00000463577.2
ENST00000496460.5
3UTR-3UTR CAA 90 bp TCAGAGGAAGAAGGCGATTCGGGAGGCCACGGTCTTGCAGCCGTTGGAGGAGAAAAGAGGGAAAACTTCTaGACCTGGCAGGGCTTCCAC +
Preference number: 3 (lower is better)
Translates to: SEEEGDSGGHGLAAVGGEKRENF*TWQGFH
Trigger: GTGGAAGCCCTGCCAGGTCAAGAAGTTTTCCCTCTT...TTCTCCTCCAACGGCTGCAAGACCGTGGCCTCCCGAATCGCCTTCTTCCTCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373281.8
ENST00000463577.2
3UTR TCA 72 bp GGAAGGGCACCACTGCGTCTAGGAGGCGCTCTTCCATaGTGCCCGAGTTTGAGAAGCCATCTGATGAAGATG +
Preference number: 3 (lower is better)
Translates to: GRAPLRLGGALP*CPSLRSHLMKM
Trigger: CATCTTCATCAGATGGCTTCTCAAACTCGGGCATCATGGAAGAGCGCCTCCTAGACGCAGTGGTGCCCTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463256.5
3UTR TCA 72 bp CCAAGTGGCAGCTTGAGTCCCTCCATTTCTGGAAACTaGGAAGGCTCCACCTGGCTTGATATGGACACAGGG +
Preference number: 3 (lower is better)
Translates to: PSGSLSPSISGN*EGSTWLDMDTG
Trigger: CCCTGTGTCCATATCAAGCCAGGTGGAGCCTTCTCAGTTTCCAGAAATGGAGGGACTCAAGCTGCCACTTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000373284.10
ENST00000463577.2
3UTR TCA 72 bp GCAGGGCTTCCACAAAGAAGTGGCGATCAAAAAGACTaGGCCCAGAATTTGCTGAGAATGTCCAAAGGGAAA +
Preference number: 3 (lower is better)
Translates to: AGLPQRSGDQKD*AQNLLRMSKGK
Trigger: TTTCCCTTTGGACATTCTCAGCAAATTCTGGGCTCAGTCTTTTTGATCGCCACTTCTTTGTGGAAGCCCTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373281.8
ENST00000463577.2
3UTR TCA 72 bp AAACACTTTTGTGTCCCTCAACTGACTTTCCCTCACTaGACTTCCAGGAAGGCATCGGGGCATCATTATTGG +
Preference number: 3 (lower is better)
Translates to: KHFCVPQLTFPH*TSRKASGHHYW
Trigger: CCAATAATGATGCCCCGATGCCTTCCTGGAAGTTCAGTGAGGGAAAGTCAGTTGAGGGACACAAAAGTGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373281.8
ENST00000463577.2
3UTR TCA 72 bp GAAGTGGCGATCAAAAAGACTGAGCCCAGAATTTGCTaGGAATGTCCAAAGGGAAATCAACCAGGCGGAATG +
Preference number: 3 (lower is better)
Translates to: EVAIKKTEPRIC*ECPKGNQPGGM
Trigger: CATTCCGCCTGGTTGATTTCCCTTTGGACATTCTCAGCAAATTCTGGGCTCAGTCTTTTTGATCGCCACTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000463577.2
CDS-3UTR CCA 90 bp GGCTCCAGCTCCTGCAGGAGGATCTCCTCGCGGTCCCGCCGGCTGCGCCACGCCCGGACGTGGTGCCGCTaGAGCGGGAGGAAGGGCACC +
Preference number: 4 (lower is better)
Translates to: GSSSCRRISSRSRRLRHARTWCR*SGRKGT
Trigger: GGTGCCCTTCCTCCCGCTCCAGCGGCACCACGTCCG...GGCGTGGCGCAGCCGGCGGGACCGCGAGGAGATCCTCCTGCAGGAGCTGGAGCC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373281.8
ENST00000463577.2
ENST00000493439.1
ENST00000496460.5
CDS-3UTR CCA 90 bp CGGCTCCAGCTCCTGCAGGAGGATCTCCTCGCGGTCCCGCCGGCTGCGCCACGCGACCAGGGGTTTCCCTaGGGAAGGTGGCCGGGGCCA +
Preference number: 4 (lower is better)
Translates to: RLQLLQEDLLAVPPAAPRDQGFP*GRWPGP
Trigger: TGGCCCCGGCCACCTTCCCCAGGGAAACCCCTGGTC...GCGTGGCGCAGCCGGCGGGACCGCGAGGAGATCCTCCTGCAGGAGCTGGAGCCG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373281.8
ENST00000463577.2
CDS-3UTR GCA 90 bp CTCACGGTGCGGGTTGTCCAGCACCGCGCGGGAGATGACCGGCTCCAGCTCCTGCGCGGTCCCGCCGGCTaGGCCACGCCTCCAATGCCA +
Preference number: 4 (lower is better)
Translates to: LTVRVVQHRAGDDRLQLLRGPAG*ATPPMP
Trigger: TGGCATTGGAGGCGTGGCGCAGCCGGCGGGACCGCG...CAGGAGCTGGAGCCGGTCATCTCCCGCGCGGTGCTGGACAACCCGCACCGTGAG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373281.8
ENST00000463577.2
ENST00000493439.1
CDS-3UTR GCA 90 bp CCGGCTCCAGCTCCTGCAGGAGGATCTCCTCGCGGTCCCGCCGGCTGCGCCACGGAGCCAGACTCACGGTaGGGGTTGTCCAGCACCGCG +
Preference number: 4 (lower is better)
Translates to: PAPAPAGGSPRGPAGCATEPDSR*GLSSTA
Trigger: CGCGGTGCTGGACAACCCGCACCGTGAGTCTGGCTC...CGTGGCGCAGCCGGCGGGACCGCGAGGAGATCCTCCTGCAGGAGCTGGAGCCGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373281.8
ENST00000463577.2
ENST00000493439.1
CDS-3UTR CCA 90 bp CGGCTCCAGCTCCTGCAGGAGGATCTCCTCGCGGTCCCGCCGGCTGCGCCACGCTCACCACCAGCGCCTTaGCCAGATGCTGGCCGGCCA +
Preference number: 4 (lower is better)
Translates to: RLQLLQEDLLAVPPAAPRSPPAP*PDAGRP
Trigger: TGGCCGGCCAGCATCTGGCCAAGGCGCTGGTGGTGA...GCGTGGCGCAGCCGGCGGGACCGCGAGGAGATCCTCCTGCAGGAGCTGGAGCCG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373281.8
3UTR CAA 72 bp CGGGAGGGGGCTGCTGAGCCAGACTCACGGTGCGGGTaGTCCAGCACCGCGCGGGAGATGACCGGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: REGAAEPDSRCG*SSTAREMTGSS
Trigger: GCTGGAGCCGGTCATCTCCCGCGCGGTGCTGGACAACCCGCACCGTGAGTCTGGCTCAGCAGCCCCCTCCCG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373281.8
ENST00000463577.2
ENST00000493439.1
CDS-3UTR GCA 90 bp GCTGCCCGGGAGGGGGCTGCTGAGCCAGACTCACGGTGCGGGTTGTCCAGCACCCCCCACTGTGCCCACTaGAAAGCCGGGCCCCACCTG +
Preference number: 4 (lower is better)
Translates to: AAREGAAEPDSRCGLSSTPHCAH*KAGPHL
Trigger: CAGGTGGGGCCCGGCTTTGCAGTGGGCACAGTGGGG...GGTGCTGGACAACCCGCACCGTGAGTCTGGCTCAGCAGCCCCCTCCCGGGCAGC
71% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000373281.8
ENST00000463577.2
CDS-3UTR CCA 90 bp GCTCCAGCTCCTGCAGGAGGATCTCCTCGCGGTCCCGCCGGCTGCGCCACGCCTAGCGCAGGGCAGGATTaGACCCTCGCTTCCCCGCTG +
Preference number: 4 (lower is better)
Translates to: APAPAGGSPRGPAGCATPSAGQD*TLASPL
Trigger: CAGCGGGGAAGCGAGGGTCCAATCCTGCCCTGCGCT...AGGCGTGGCGCAGCCGGCGGGACCGCGAGGAGATCCTCCTGCAGGAGCTGGAGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373281.8
ENST00000463577.2
CDS-3UTR TCA 90 bp CTCGCGGTCCCGCCGGCTGCGCCACGCCTCCAATGCCACCTGGTTGATCTGCTTGCACCGCGCGGGAGATaGCCGGCTCCAGCTCCTGCA +
Preference number: 4 (lower is better)
Translates to: LAVPPAAPRLQCHLVDLLAPRGR*PAPAPA
Trigger: TGCAGGAGCTGGAGCCGGTCATCTCCCGCGCGGTGC...AAGCAGATCAACCAGGTGGCATTGGAGGCGTGGCGCAGCCGGCGGGACCGCGAG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373281.8
ENST00000463577.2
ENST00000493439.1
ENST00000496460.5
CDS-3UTR GCA 90 bp GGCCAGGGCCCTTCCTGGCCATCTGTCCCGTGGCCTAGCCGACACTCCGTTCATGGTGCACGCGGGGGCTaGGGAGGCCGCCCTGGAAGA +
Preference number: 4 (lower is better)
Translates to: GQGPSWPSVPWPSRHSVHGARGG*GGRPGR
Trigger: TCTTCCAGGGCGGCCTCCGCAGCCCCCGCGTGCACC...ATGAACGGAGTGTCGGCTAGGCCACGGGACAGATGGCCAGGAAGGGCCCTGGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000373284.10
CDS-3UTR GCA 90 bp GGGAAGGTGGCCGGGGCCAAGATGCTCTCGAGCCAGTTTAGAGGCCAGGGCCCTCGCGGTCCCGCCGGCTaGGCCACGCCTCCAATGCCA +
Preference number: 4 (lower is better)
Translates to: GKVAGAKMLSSQFRGQGPRGPAG*ATPPMP
Trigger: TGGCATTGGAGGCGTGGCGCAGCCGGCGGGACCGCG...AGGGCCCTGGCCTCTAAACTGGCTCGAGAGCATCTTGGCCCCGGCCACCTTCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373281.8
ENST00000373284.10
ENST00000463577.2
ENST00000496460.5
CDS-3UTR CCA 90 bp GGCAAGGGGCAAGGGTGGCAGACTGAGGAGGGAGCACCGCCACGAGCCACAGTCACGCAGTGCCGGACGTaGTGCCGCTGGAGCGGGAGG +
Preference number: 4 (lower is better)
Translates to: GKGQGWQTEEGAPPRATVTQCRT*CRWSGR
Trigger: CCTCCCGCTCCAGCGGCACCACGTCCGGCACTGCGT...GACTGTGGCTCGTGGCGGTGCTCCCTCCTCAGTCTGCCACCCTTGCCCCTTGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000373284.10
ENST00000463577.2
CDS-3UTR TCA 90 bp GACTCACGGTGCGGGTTGTCCAGCACCGCGCGGGAGATGACCGGCTCCAGCTCCTGGCCGGCCAGGTGCTaGGCCAGGTCACACTCCAGA +
Preference number: 4 (lower is better)
Translates to: DSRCGLSSTAREMTGSSSWPARC*ARSHSR
Trigger: TCTGGAGTGTGACCTGGCTCAGCACCTGGCCGGCCA...GGAGCTGGAGCCGGTCATCTCCCGCGCGGTGCTGGACAACCCGCACCGTGAGTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373281.8
CDS-3UTR TCA 90 bp CGGCTCCAGCTCCTGCAGGAGGATCTCCTCGCGGTCCCGCCGGCTGCGCCACGCGGAGGCGCTCTTCCATaGTGCCCGAGTTTGAGAAGC +
Preference number: 4 (lower is better)
Translates to: RLQLLQEDLLAVPPAAPRGGALP*CPSLRS
Trigger: GCTTCTCAAACTCGGGCATCATGGAAGAGCGCCTCC...GCGTGGCGCAGCCGGCGGGACCGCGAGGAGATCCTCCTGCAGGAGCTGGAGCCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373281.8
ENST00000463577.2
ENST00000493439.1
ENST00000496460.5
CDS-3UTR TCA 90 bp CCGGCTCCAGCTCCTGCAGGAGGATCTCCTCGCGGTCCCGCCGGCTGCGCCACGGGAGGCGCTCTTCCATaGTGCCCGAGTTTGAGAAGC +
Preference number: 4 (lower is better)
Translates to: PAPAPAGGSPRGPAGCATGGALP*CPSLRS
Trigger: GCTTCTCAAACTCGGGCATCATGGAAGAGCGCCTCC...CGTGGCGCAGCCGGCGGGACCGCGAGGAGATCCTCCTGCAGGAGCTGGAGCCGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373281.8
ENST00000463577.2
ENST00000493439.1
ENST00000496460.5
CDS-3UTR TCA 90 bp GGGCAAGGGTGGCAGACTGAGGAGGGAGCACCGCCACGAGCCACAGTCCCTGAGGCTGGGCCAGCTCGTTaGGCACGCAGTGCCGGACGT +
Preference number: 4 (lower is better)
Translates to: GQGWQTEEGAPPRATVPEAGPAR*ARSAGR
Trigger: ACGTCCGGCACTGCGTGCTCAACGAGCTGGCCCAGC...CTCAGGGACTGTGGCTCGTGGCGGTGCTCCCTCCTCAGTCTGCCACCCTTGCCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000373284.10
ENST00000463577.2
CDS-3UTR GCA 90 bp AGGTGGCCGGGGCCAAGATGCTCTCGAGCCAGTTTAGAGGCCAGGGCCCTTCCTGGTGCACGCGGGGGCTaGGGAGGCCGCCCTGGAAGA +
Preference number: 4 (lower is better)
Translates to: RWPGPRCSRASLEARALPGARGG*GGRPGR
Trigger: TCTTCCAGGGCGGCCTCCGCAGCCCCCGCGTGCACC...AGGAAGGGCCCTGGCCTCTAAACTGGCTCGAGAGCATCTTGGCCCCGGCCACCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000373284.10
CDS-3UTR GCA 90 bp GGCAAGGGGCAAGGGTGGCAGACTGAGGAGGGAGCACCGCCACGAGCCACAGTCCCCCACTGTGCCCACTaGAAAGCCGGGCCCCACCTG +
Preference number: 4 (lower is better)
Translates to: GKGQGWQTEEGAPPRATVPHCAH*KAGPHL
Trigger: CAGGTGGGGCCCGGCTTTGCAGTGGGCACAGTGGGG...GACTGTGGCTCGTGGCGGTGCTCCCTCCTCAGTCTGCCACCCTTGCCCCTTGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000373281.8
ENST00000463577.2
CDS-3UTR GCA 90 bp GGCTCCAGCTCCTGCAGGAGGATCTCCTCGCGGTCCCGCCGGCTGCGCCACGCCGCGCCACGCCTCCAATaGCACCTGGTTGATCTGCTT +
Preference number: 4 (lower is better)
Translates to: GSSSCRRISSRSRRLRHAAPRLQ*HLVDLL
Trigger: AAGCAGATCAACCAGGTGGCATTGGAGGCGTGGCGC...GGCGTGGCGCAGCCGGCGGGACCGCGAGGAGATCCTCCTGCAGGAGCTGGAGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373281.8
ENST00000463577.2
ENST00000493439.1
ENST00000496460.5
CDS-3UTR CCA 90 bp TGGGGAAGGTGGCCGGGGCCAAGATGCTCTCGAGCCAGTTTAGAGGCCAGGGCCCGGACGTGGTGCCGCTaGAGCGGGAGGAAGGGCACC +
Preference number: 4 (lower is better)
Translates to: WGRWPGPRCSRASLEARARTWCR*SGRKGT
Trigger: GGTGCCCTTCCTCCCGCTCCAGCGGCACCACGTCCG...GGCCCTGGCCTCTAAACTGGCTCGAGAGCATCTTGGCCCCGGCCACCTTCCCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000373284.10
ENST00000463256.5
ENST00000463577.2
ENST00000496460.5
CDS-3UTR CCA 90 bp GGGAAGGTGGCCGGGGCCAAGATGCTCTCGAGCCAGTTTAGAGGCCAGGGCCCTACGCAGTGCCGGACGTaGTGCCGCTGGAGCGGGAGG +
Preference number: 4 (lower is better)
Translates to: GKVAGAKMLSSQFRGQGPTQCRT*CRWSGR
Trigger: CCTCCCGCTCCAGCGGCACCACGTCCGGCACTGCGT...AGGGCCCTGGCCTCTAAACTGGCTCGAGAGCATCTTGGCCCCGGCCACCTTCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000373284.10
ENST00000463256.5
ENST00000463577.2
ENST00000496460.5
CDS-3UTR CCA 90 bp CCCTGGGGAAGGTGGCCGGGGCCAAGATGCTCTCGAGCCAGTTTAGAGGCCAGGCCTGGCCCCTGGGTGTaGGGTGAAGCTGCCCGGGAG +
Preference number: 4 (lower is better)
Translates to: PWGRWPGPRCSRASLEARPGPWV*GEAARE
Trigger: CTCCCGGGCAGCTTCACCCCACACCCAGGGGCCAGG...CCTGGCCTCTAAACTGGCTCGAGAGCATCTTGGCCCCGGCCACCTTCCCCAGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373281.8
ENST00000463577.2
CDS-3UTR TCA 90 bp GCTCCAGCTCCTGCAGGAGGATCTCCTCGCGGTCCCGCCGGCTGCGCCACGCCTCCAATGCCACCTGGTTaGTCTGCTTGCCACCCGTGT +
Preference number: 4 (lower is better)
Translates to: APAPAGGSPRGPAGCATPPMPPG*SACHPC
Trigger: ACACGGGTGGCAAGCAGATCAACCAGGTGGCATTGG...AGGCGTGGCGCAGCCGGCGGGACCGCGAGGAGATCCTCCTGCAGGAGCTGGAGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373281.8
ENST00000463577.2
ENST00000493439.1
ENST00000496460.5
CDS-3UTR TCA 90 bp GGGGGCCGAGGACACCACTCAGAGAGTCAGAGGAAGAAGGCGATTCGGGAGGCCGCACCGCGCGGGAGATaGCCGGCTCCAGCTCCTGCA +
Preference number: 4 (lower is better)
Translates to: GGRGHHSESQRKKAIREAAPRGR*PAPAPA
Trigger: TGCAGGAGCTGGAGCCGGTCATCTCCCGCGCGGTGC...GGCCTCCCGAATCGCCTTCTTCCTCTGACTCTCTGAGTGGTGTCCTCGGCCCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373281.8
ENST00000463577.2
ENST00000496460.5
CDS-3UTR TCA 90 bp AAGGTGGCCGGGGCCAAGATGCTCTCGAGCCAGTTTAGAGGCCAGGGCCCTTCCGCACCGCGCGGGAGATaGCCGGCTCCAGCTCCTGCA +
Preference number: 4 (lower is better)
Translates to: KVAGAKMLSSQFRGQGPSAPRGR*PAPAPA
Trigger: TGCAGGAGCTGGAGCCGGTCATCTCCCGCGCGGTGC...GGAAGGGCCCTGGCCTCTAAACTGGCTCGAGAGCATCTTGGCCCCGGCCACCTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373281.8
ENST00000373284.10
ENST00000463577.2
ENST00000496460.5
CDS-3UTR TCA 90 bp GAGGATCTCCTCGCGGTCCCGCCGGCTGCGCCACGCCTCCAATGCCACCTGGTTTCAGTGGGCAAAGCATaGGACCCCGGGAGAGCCTGG +
Preference number: 4 (lower is better)
Translates to: EDLLAVPPAAPRLQCHLVSVGKA*DPGRAW
Trigger: CCAGGCTCTCCCGGGGTCTCATGCTTTGCCCACTGA...AACCAGGTGGCATTGGAGGCGTGGCGCAGCCGGCGGGACCGCGAGGAGATCCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373281.8
ENST00000463577.2
ENST00000493439.1
CDS-3UTR GCA 90 bp GGAAGGTGGCCGGGGCCAAGATGCTCTCGAGCCAGTTTAGAGGCCAGGGCCCTTGTGCCGGTCCAGCCGTaGAGGGAGAGGACCAGCGGC +
Preference number: 4 (lower is better)
Translates to: GRWPGPRCSRASLEARALVPVQP*RERTSG
Trigger: GCCGCTGGTCCTCTCCCTGCACGGCTGGACCGGCAC...AAGGGCCCTGGCCTCTAAACTGGCTCGAGAGCATCTTGGCCCCGGCCACCTTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000373284.10
CDS-3UTR GCA 90 bp GGGCAAGGGTGGCAGACTGAGGAGGGAGCACCGCCACGAGCCACAGTCCCTGAGACGGGAGAAAAGTGGTaGACGCGGGGGCTGCGGAGG +
Preference number: 4 (lower is better)
Translates to: GQGWQTEEGAPPRATVPETGEKW*TRGLRR
Trigger: CCTCCGCAGCCCCCGCGTGCACCACTTTTCTCCCGT...CTCAGGGACTGTGGCTCGTGGCGGTGCTCCCTCCTCAGTCTGCCACCCTTGCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000373284.10
CDS-3UTR GCA 90 bp TGGGGAAGGTGGCCGGGGCCAAGATGCTCTCGAGCCAGTTTAGAGGCCAGGGCCCAGTGCCGGACGTGGTaGCGCTGGAGCGGGAGGAAG +
Preference number: 4 (lower is better)
Translates to: WGRWPGPRCSRASLEARAQCRTW*RWSGRK
Trigger: CTTCCTCCCGCTCCAGCGGCACCACGTCCGGCACTG...GGCCCTGGCCTCTAAACTGGCTCGAGAGCATCTTGGCCCCGGCCACCTTCCCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000373284.10
ENST00000463256.5
ENST00000463577.2
ENST00000496460.5
CDS-3UTR GCA 90 bp CCGGCTCCAGCTCCTGCAGGAGGATCTCCTCGCGGTCCCGCCGGCTGCGCCACGTGGGGAACTGGATTCTaGTGGGAGCACAGGCTAAGG +
Preference number: 4 (lower is better)
Translates to: PAPAPAGGSPRGPAGCATWGTGF*WEHRLR
Trigger: CCTTAGCCTGTGCTCCCAGCAGAATCCAGTTCCCCA...CGTGGCGCAGCCGGCGGGACCGCGAGGAGATCCTCCTGCAGGAGCTGGAGCCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373281.8
ENST00000463577.2
CDS-3UTR GCA 90 bp GCTCCAGCTCCTGCAGGAGGATCTCCTCGCGGTCCCGCCGGCTGCGCCACGCCTGCCACCTGGTTGATCTaGTTGCCACCCGTGTTGCTG +
Preference number: 4 (lower is better)
Translates to: APAPAGGSPRGPAGCATPATWLI*LPPVLL
Trigger: CAGCAACACGGGTGGCAAGCAGATCAACCAGGTGGC...AGGCGTGGCGCAGCCGGCGGGACCGCGAGGAGATCCTCCTGCAGGAGCTGGAGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000493439.1
ENST00000496460.5
CDS-3UTR GCA 90 bp GCTCCAGCTCCTGCAGGAGGATCTCCTCGCGGTCCCGCCGGCTGCGCCACGCCTTTTGAGAAGCCATGGTaGGGGTTGTCCAGCACCGCG +
Preference number: 4 (lower is better)
Translates to: APAPAGGSPRGPAGCATPFEKPW*GLSSTA
Trigger: CGCGGTGCTGGACAACCCGCACCATGGCTTCTCAAA...AGGCGTGGCGCAGCCGGCGGGACCGCGAGGAGATCCTCCTGCAGGAGCTGGAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496460.5
CDS-3UTR CCA 90 bp GGCAAGGGGCAAGGGTGGCAGACTGAGGAGGGAGCACCGCCACGAGCCACAGTCAGGACGGGAGAAAAGTaGTGCACGCGGGGGCTGCGG +
Preference number: 4 (lower is better)
Translates to: GKGQGWQTEEGAPPRATVRTGEK*CTRGLR
Trigger: CCGCAGCCCCCGCGTGCACCACTTTTCTCCCGTCCT...GACTGTGGCTCGTGGCGGTGCTCCCTCCTCAGTCTGCCACCCTTGCCCCTTGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000373284.10
CDS-3UTR CCA 90 bp CCGGCTCCAGCTCCTGCAGGAGGATCTCCTCGCGGTCCCGCCGGCTGCGCCACGGCAGTGAGGTTCCCTTaGACCCAGCTCTTCAGATCC +
Preference number: 4 (lower is better)
Translates to: PAPAPAGGSPRGPAGCATAVRFP*TQLFRS
Trigger: GGATCTGAAGAGCTGGGTCCAAGGGAACCTCACTGC...CGTGGCGCAGCCGGCGGGACCGCGAGGAGATCCTCCTGCAGGAGCTGGAGCCGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373281.8
ENST00000463577.2
ENST00000493439.1
ENST00000496460.5
CDS-3UTR CCA 90 bp CCGGCTCCAGCTCCTGCAGGAGGATCTCCTCGCGGTCCCGCCGGCTGCGCCACGCTTCAGGGAAGAAGGTaGTGCTGTCCAGCACAGCCT +
Preference number: 4 (lower is better)
Translates to: PAPAPAGGSPRGPAGCATLQGRR*CCPAQP
Trigger: AGGCTGTGCTGGACAGCACCACCTTCTTCCCTGAAG...CGTGGCGCAGCCGGCGGGACCGCGAGGAGATCCTCCTGCAGGAGCTGGAGCCGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373281.8
ENST00000463577.2
ENST00000496460.5
CDS-3UTR CCA 90 bp CCGGCTCCAGCTCCTGCAGGAGGATCTCCTCGCGGTCCCGCCGGCTGCGCCACGTCTCACTTGGTGCTCTaGGTTCCTGTGACAGAGGCC +
Preference number: 4 (lower is better)
Translates to: PAPAPAGGSPRGPAGCATSHLVL*VPVTEA
Trigger: GGCCTCTGTCACAGGAACCCAGAGCACCAAGTGAGA...CGTGGCGCAGCCGGCGGGACCGCGAGGAGATCCTCCTGCAGGAGCTGGAGCCGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373281.8
ENST00000463577.2
ENST00000496460.5
CDS-3UTR CCA 90 bp GCTGCTGAGCCAGACTCACGGTGCGGGTTGTCCAGCACCGCGCGGGAGATGACCAGCGCAGGGCAGGATTaGACCCTCGCTTCCCCGCTG +
Preference number: 4 (lower is better)
Translates to: AAEPDSRCGLSSTAREMTSAGQD*TLASPL
Trigger: CAGCGGGGAAGCGAGGGTCCAATCCTGCCCTGCGCT...GGTCATCTCCCGCGCGGTGCTGGACAACCCGCACCGTGAGTCTGGCTCAGCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373281.8
ENST00000463577.2
CDS-3UTR CCA 90 bp CCGGCTCCAGCTCCTGCAGGAGGATCTCCTCGCGGTCCCGCCGGCTGCGCCACGTGCAGGAAGGGTAGGTaGGGAGGGGACTTTGTGCTT +
Preference number: 4 (lower is better)
Translates to: PAPAPAGGSPRGPAGCATCRKGR*GGDFVL
Trigger: AAGCACAAAGTCCCCTCCCCACCTACCCTTCCTGCA...CGTGGCGCAGCCGGCGGGACCGCGAGGAGATCCTCCTGCAGGAGCTGGAGCCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373281.8
ENST00000463577.2
ENST00000493439.1
CDS-3UTR TCA 90 bp GGCAAGGGGCAAGGGTGGCAGACTGAGGAGGGAGCACCGCCACGAGCCACAGTCGCGCCAGCAGGGAGCTaGCATAGGATTTGCCGGTGC +
Preference number: 4 (lower is better)
Translates to: GKGQGWQTEEGAPPRATVAPAGS*HRICRC
Trigger: GCACCGGCAAATCCTATGTCAGCTCCCTGCTGGCGC...GACTGTGGCTCGTGGCGGTGCTCCCTCCTCAGTCTGCCACCCTTGCCCCTTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000373284.10
CDS-3UTR TCA 90 bp GACTCACGGTGCGGGTTGTCCAGCACCGCGCGGGAGATGACCGGCTCCAGCTCCAGGCTGAGACTCAGATaGGGACTAGCGCAGGGCAGG +
Preference number: 4 (lower is better)
Translates to: DSRCGLSSTAREMTGSSSRLRLR*GLAQGR
Trigger: CCTGCCCTGCGCTAGTCCTCATCTGAGTCTCAGCCT...GGAGCTGGAGCCGGTCATCTCCCGCGCGGTGCTGGACAACCCGCACCGTGAGTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373281.8
ENST00000463577.2
CDS-3UTR TCA 90 bp CGGCTCCAGCTCCTGCAGGAGGATCTCCTCGCGGTCCCGCCGGCTGCGCCACGCCATGATGCCCGAGTTTaGGAAGCCATCTGCAGGAAG +
Preference number: 4 (lower is better)
Translates to: RLQLLQEDLLAVPPAAPRHDARV*EAICRK
Trigger: CTTCCTGCAGATGGCTTCTCAAACTCGGGCATCATG...GCGTGGCGCAGCCGGCGGGACCGCGAGGAGATCCTCCTGCAGGAGCTGGAGCCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373281.8
ENST00000463577.2
ENST00000493439.1
CDS-3UTR GCA 90 bp TCCTGGCCATCTGTCCCGTGGCCTAGCCGACACTCCGTTCATCTCACTTGGTGCGGTGCACGCGGGGGCTaGGGAGGCCGCCCTGGAAGA +
Preference number: 4 (lower is better)
Translates to: SWPSVPWPSRHSVHLTWCGARGG*GGRPGR
Trigger: TCTTCCAGGGCGGCCTCCGCAGCCCCCGCGTGCACC...GCACCAAGTGAGATGAACGGAGTGTCGGCTAGGCCACGGGACAGATGGCCAGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000373284.10
CDS-3UTR GCA 90 bp AGCGGGAGGAAGGGCACCACTGCGTCTAGGAGGCGCTCTTCCATGATGCCCGAGCAGTGCCGGACGTGGTaGCGCTGGAGCGGGAGGAAG +
Preference number: 4 (lower is better)
Translates to: SGRKGTTASRRRSSMMPEQCRTW*RWSGRK
Trigger: CTTCCTCCCGCTCCAGCGGCACCACGTCCGGCACTG...CTCGGGCATCATGGAAGAGCGCCTCCTAGACGCAGTGGTGCCCTTCCTCCCGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000373281.8
ENST00000463256.5
ENST00000463577.2
ENST00000493439.1
ENST00000496460.5
CDS-3UTR GCA 90 bp CCCTGGGGAAGGTGGCCGGGGCCAAGATGCTCTCGAGCCAGTTTAGAGGCCAGGGCCCCTGGCCTTTCCTaGATGGCCTGGCCATCAGGG +
Preference number: 4 (lower is better)
Translates to: PWGRWPGPRCSRASLEARAPGLS*MAWPSG
Trigger: CCCTGATGGCCAGGCCATGCAGGAAAGGCCAGGGGC...CCTGGCCTCTAAACTGGCTCGAGAGCATCTTGGCCCCGGCCACCTTCCCCAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000373284.10
ENST00000463256.5
ENST00000463577.2
CDS-3UTR GCA 90 bp GATTCGGGAGGCCACGGTCTTGCAGCCGTTGGAGGAGAAGAGCTGCTCGTCTTCCGCGGTCCCGCCGGCTaGGCCACGCCTCCAATGCCA +
Preference number: 4 (lower is better)
Translates to: DSGGHGLAAVGGEELLVFRGPAG*ATPPMP
Trigger: TGGCATTGGAGGCGTGGCGCAGCCGGCGGGACCGCG...GAAGACGAGCAGCTCTTCTCCTCCAACGGCTGCAAGACCGTGGCCTCCCGAATC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373281.8
ENST00000463577.2
ENST00000496460.5
CDS-3UTR CCA 90 bp TGGGGAAGGTGGCCGGGGCCAAGATGCTCTCGAGCCAGTTTAGAGGCCAGGGCCAGGACGGGAGAAAAGTaGTGCACGCGGGGGCTGCGG +
Preference number: 4 (lower is better)
Translates to: WGRWPGPRCSRASLEARARTGEK*CTRGLR
Trigger: CCGCAGCCCCCGCGTGCACCACTTTTCTCCCGTCCT...GGCCCTGGCCTCTAAACTGGCTCGAGAGCATCTTGGCCCCGGCCACCTTCCCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000373284.10
CDS-3UTR CCA 90 bp GCCAGGGCCCTTCCTGGCCATCTGTCCCGTGGCCTAGCCGACACTCCGTTCATCAGGACGGGAGAAAAGTaGTGCACGCGGGGGCTGCGG +
Preference number: 4 (lower is better)
Translates to: ARALPGHLSRGLADTPFIRTGEK*CTRGLR
Trigger: CCGCAGCCCCCGCGTGCACCACTTTTCTCCCGTCCT...GATGAACGGAGTGTCGGCTAGGCCACGGGACAGATGGCCAGGAAGGGCCCTGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000373284.10
CDS-3UTR CCA 90 bp AGGCGATTCGGGAGGCCACGGTCTTGCAGCCGTTGGAGGAGAAGAGCTGCTCGTACGCAGTGCCGGACGTaGTGCCGCTGGAGCGGGAGG +
Preference number: 4 (lower is better)
Translates to: RRFGRPRSCSRWRRRAARTQCRT*CRWSGR
Trigger: CCTCCCGCTCCAGCGGCACCACGTCCGGCACTGCGT...ACGAGCAGCTCTTCTCCTCCAACGGCTGCAAGACCGTGGCCTCCCGAATCGCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000463256.5
ENST00000463577.2
ENST00000496460.5
CDS-3UTR TCA 90 bp GTTTCCCTGGGGAAGGTGGCCGGGGCCAAGATGCTCTCGAGCCAGTTTAGAGGCGCAAGGGTGGCAGACTaGGGAGGGAGCACCGCCACG +
Preference number: 4 (lower is better)
Translates to: VSLGKVAGAKMLSSQFRGARVAD*GGSTAT
Trigger: CGTGGCGGTGCTCCCTCCTCAGTCTGCCACCCTTGC...GCCTCTAAACTGGCTCGAGAGCATCTTGGCCCCGGCCACCTTCCCCAGGGAAAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000373284.10
ENST00000463577.2
CDS-3UTR GCA 90 bp CACTTGGTGCTCTGGGTTCCTGTGACAGAGGCCCCTGGCCTTTCCTGCATGGCCCAGTGCCGGACGTGGTaGCGCTGGAGCGGGAGGAAG +
Preference number: 4 (lower is better)
Translates to: HLVLWVPVTEAPGLSCMAQCRTW*RWSGRK
Trigger: CTTCCTCCCGCTCCAGCGGCACCACGTCCGGCACTG...GGCCATGCAGGAAAGGCCAGGGGCCTCTGTCACAGGAACCCAGAGCACCAAGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000373284.10
ENST00000463256.5
ENST00000463577.2
ENST00000496460.5
CDS-3UTR GCA 90 bp AGGGCCCTTCCTGGCCATCTGTCCCGTGGCCTAGCCGACACTCCGTTCATCTCACAGTGCCGGACGTGGTaGCGCTGGAGCGGGAGGAAG +
Preference number: 4 (lower is better)
Translates to: RALPGHLSRGLADTPFISQCRTW*RWSGRK
Trigger: CTTCCTCCCGCTCCAGCGGCACCACGTCCGGCACTG...TGAGATGAACGGAGTGTCGGCTAGGCCACGGGACAGATGGCCAGGAAGGGCCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000373284.10
ENST00000463256.5
ENST00000463577.2
ENST00000496460.5
CDS-3UTR GCA 90 bp GGGCAAGGGTGGCAGACTGAGGAGGGAGCACCGCCACGAGCCACAGTCCCTGAGGGGAGGCCACGGTCTTaGAGCCGTTGGAGGAGAAGA +
Preference number: 4 (lower is better)
Translates to: GQGWQTEEGAPPRATVPEGRPRS*SRWRRR
Trigger: TCTTCTCCTCCAACGGCTGCAAGACCGTGGCCTCCC...CTCAGGGACTGTGGCTCGTGGCGGTGCTCCCTCCTCAGTCTGCCACCCTTGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000373284.10
ENST00000463577.2
CDS-3UTR GCA 90 bp GAGGAGAAGAGCTGCTCGTCTTCAGGGAAGAAGGTGGTGCTGTCCAGCACAGCCCGCGGTCCCGCCGGCTaGGCCACGCCTCCAATGCCA +
Preference number: 4 (lower is better)
Translates to: EEKSCSSSGKKVVLSSTARGPAG*ATPPMP
Trigger: TGGCATTGGAGGCGTGGCGCAGCCGGCGGGACCGCG...GGCTGTGCTGGACAGCACCACCTTCTTCCCTGAAGACGAGCAGCTCTTCTCCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373281.8
ENST00000463577.2
ENST00000496460.5
CDS-3UTR GCA 90 bp CAGTTTAGAGGCCAGGGCCCTTCCTGGCCATCTGTCCCGTGGCCTAGCCGACACGAGCCAGACTCACGGTaGGGGTTGTCCAGCACCGCG +
Preference number: 4 (lower is better)
Translates to: QFRGQGPSWPSVPWPSRHEPDSR*GLSSTA
Trigger: CGCGGTGCTGGACAACCCGCACCGTGAGTCTGGCTC...GTGTCGGCTAGGCCACGGGACAGATGGCCAGGAAGGGCCCTGGCCTCTAAACTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373281.8
ENST00000463577.2
CDS-3UTR CCA 90 bp GTTTCCCTGGGGAAGGTGGCCGGGGCCAAGATGCTCTCGAGCCAGTTTAGAGGCGGACCAGCGGCTTGGTaGGGGCTGGGTCCCGCACAA +
Preference number: 4 (lower is better)
Translates to: VSLGKVAGAKMLSSQFRGGPAAW*GLGPAQ
Trigger: TTGTGCGGGACCCAGCCCCCACCAAGCCGCTGGTCC...GCCTCTAAACTGGCTCGAGAGCATCTTGGCCCCGGCCACCTTCCCCAGGGAAAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000373284.10
CDS-3UTR CCA 90 bp GGGTTTCCCTGGGGAAGGTGGCCGGGGCCAAGATGCTCTCGAGCCAGTTTAGAGGGACCAGCGGCTTGGTaGGGGCTGGGTCCCGCACAA +
Preference number: 4 (lower is better)
Translates to: GFPWGRWPGPRCSRASLEGPAAW*GLGPAQ
Trigger: TTGTGCGGGACCCAGCCCCCACCAAGCCGCTGGTCC...CTCTAAACTGGCTCGAGAGCATCTTGGCCCCGGCCACCTTCCCCAGGGAAACCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000373284.10
CDS-3UTR CCA 90 bp TCCTGGCCATCTGTCCCGTGGCCTAGCCGACACTCCGTTCATCTCACTTGGTGCCGGACGTGGTGCCGCTaGAGCGGGAGGAAGGGCACC +
Preference number: 4 (lower is better)
Translates to: SWPSVPWPSRHSVHLTWCRTWCR*SGRKGT
Trigger: GGTGCCCTTCCTCCCGCTCCAGCGGCACCACGTCCG...GCACCAAGTGAGATGAACGGAGTGTCGGCTAGGCCACGGGACAGATGGCCAGGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000373284.10
ENST00000463256.5
ENST00000463577.2
ENST00000496460.5
CDS-3UTR CCA 90 bp CACTTGGTGCTCTGGGTTCCTGTGACAGAGGCCCCTGGCCTTTCCTGCATGGCCGGCTCCAGGCCCAGCTaGGCCAGCTCGTTGAGCACG +
Preference number: 4 (lower is better)
Translates to: HLVLWVPVTEAPGLSCMAGSRPS*ASSLST
Trigger: CGTGCTCAACGAGCTGGCCCAGCTGGGCCTGGAGCC...GGCCATGCAGGAAAGGCCAGGGGCCTCTGTCACAGGAACCCAGAGCACCAAGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000373284.10
ENST00000463256.5
ENST00000463577.2
ENST00000496460.5
CDS-3UTR CCA 90 bp GGACGTGGTGCCGCTGGAGCGGGAGGAAGGGCACCACTGCGTCTAGGAGGCGCTCTGTCCAGCACAGCCTaGACAACCTCATCCCTTGGC +
Preference number: 4 (lower is better)
Translates to: GRGAAGAGGRAPLRLGGALSSTA*TTSSLG
Trigger: GCCAAGGGATGAGGTTGTCCAGGCTGTGCTGGACAG...AGCGCCTCCTAGACGCAGTGGTGCCCTTCCTCCCGCTCCAGCGGCACCACGTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373281.8
ENST00000463256.5
ENST00000463577.2
ENST00000496460.5
CDS-3UTR CCA 90 bp CCGCCGGCTGCGCCACGCCTCCAATGCCACCTGGTTGATCTGCTTGCCACCCGTTGGCCATCTGTCCCGTaGCCTAGCCGACACTCCGTT +
Preference number: 4 (lower is better)
Translates to: PPAAPRLQCHLVDLLATRWPSVP*PSRHSV
Trigger: AACGGAGTGTCGGCTAGGCCACGGGACAGATGGCCA...ACGGGTGGCAAGCAGATCAACCAGGTGGCATTGGAGGCGTGGCGCAGCCGGCGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373281.8
ENST00000463577.2
ENST00000496460.5
CDS-3UTR CCA 90 bp TGCCGCTGGAGCGGGAGGAAGGGCACCACTGCGTCTAGGAGGCGCTCTTCCATGGGAGGGGAGGAGGTATaGTGCCCGACCAAGGAGGCA +
Preference number: 4 (lower is better)
Translates to: CRWSGRKGTTASRRRSSMGGEEV*CPTKEA
Trigger: TGCCTCCTTGGTCGGGCACCATACCTCCTCCCCTCC...CATGGAAGAGCGCCTCCTAGACGCAGTGGTGCCCTTCCTCCCGCTCCAGCGGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373281.8
ENST00000463577.2
CDS-3UTR CCA 90 bp GGGGCTGCTGAGCCAGACTCACGGTGCGGGTTGTCCAGCACCGCGCGGGAGATGGCCTCCAATGCCACCTaGTTGATCTGCTTGCCACCC +
Preference number: 4 (lower is better)
Translates to: GAAEPDSRCGLSSTAREMASNAT*LICLPP
Trigger: GGGTGGCAAGCAGATCAACCAGGTGGCATTGGAGGC...CATCTCCCGCGCGGTGCTGGACAACCCGCACCGTGAGTCTGGCTCAGCAGCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373281.8
ENST00000463577.2
ENST00000493439.1
CDS-3UTR TCA 90 bp GAGTCAGAGGAAGAAGGCGATTCGGGAGGCCACGGTCTTGCAGCCGTTGGAGGAGCTGGGCCAGCTCGTTaGGCACGCAGTGCCGGACGT +
Preference number: 4 (lower is better)
Translates to: ESEEEGDSGGHGLAAVGGAGPAR*ARSAGR
Trigger: ACGTCCGGCACTGCGTGCTCAACGAGCTGGCCCAGC...TCCTCCAACGGCTGCAAGACCGTGGCCTCCCGAATCGCCTTCTTCCTCTGACTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000463256.5
ENST00000463577.2
ENST00000496460.5
CDS-3UTR TCA 90 bp GCCAGGGCCCTTCCTGGCCATCTGTCCCGTGGCCTAGCCGACACTCCGTTCATCGAGGTCAAGGCTCAGTaGGGTTCTGGGGTGACCAGG +
Preference number: 4 (lower is better)
Translates to: ARALPGHLSRGLADTPFIEVKAQ*GSGVTR
Trigger: CCTGGTCACCCCAGAACCTCACTGAGCCTTGACCTC...GATGAACGGAGTGTCGGCTAGGCCACGGGACAGATGGCCAGGAAGGGCCCTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000373284.10
ENST00000463256.5
ENST00000463577.2
CDS-3UTR TCA 90 bp AAGGGGCAAGGGTGGCAGACTGAGGAGGGAGCACCGCCACGAGCCACAGTCCCTGAGGTCAAGGCTCAGTaGGGTTCTGGGGTGACCAGG +
Preference number: 4 (lower is better)
Translates to: KGQGWQTEEGAPPRATVPEVKAQ*GSGVTR
Trigger: CCTGGTCACCCCAGAACCTCACTGAGCCTTGACCTC...AGGGACTGTGGCTCGTGGCGGTGCTCCCTCCTCAGTCTGCCACCCTTGCCCCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000373284.10
ENST00000463577.2
CDS-3UTR TCA 90 bp TCCTGGCCATCTGTCCCGTGGCCTAGCCGACACTCCGTTCATCTCACTTGGTGCGCAAGGGTGGCAGACTaGGGAGGGAGCACCGCCACG +
Preference number: 4 (lower is better)
Translates to: SWPSVPWPSRHSVHLTWCARVAD*GGSTAT
Trigger: CGTGGCGGTGCTCCCTCCTCAGTCTGCCACCCTTGC...GCACCAAGTGAGATGAACGGAGTGTCGGCTAGGCCACGGGACAGATGGCCAGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000373284.10
ENST00000463577.2
CDS-3UTR TCA 90 bp GGGCAAGGGTGGCAGACTGAGGAGGGAGCACCGCCACGAGCCACAGTCCCTGAGCCAATGCCACCTGGTTaGTCTGCTTGCCACCCGTGT +
Preference number: 4 (lower is better)
Translates to: GQGWQTEEGAPPRATVPEPMPPG*SACHPC
Trigger: ACACGGGTGGCAAGCAGATCAACCAGGTGGCATTGG...CTCAGGGACTGTGGCTCGTGGCGGTGCTCCCTCCTCAGTCTGCCACCCTTGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373281.8
ENST00000373284.10
ENST00000463577.2
CDS-3UTR TCA 90 bp CCGCCGGCTGCGCCACGCCTCCAATGCCACCTGGTTGATCTGCTTGCCACCCGTCCAATGCCACCTGGTTaGTCTGCTTGCCACCCGTGT +
Preference number: 4 (lower is better)
Translates to: PPAAPRLQCHLVDLLATRPMPPG*SACHPC
Trigger: ACACGGGTGGCAAGCAGATCAACCAGGTGGCATTGG...ACGGGTGGCAAGCAGATCAACCAGGTGGCATTGGAGGCGTGGCGCAGCCGGCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373281.8
ENST00000463577.2
ENST00000493439.1
ENST00000496460.5
CDS-3UTR TCA 90 bp TTTGCGGTAATTGGTCCCGTATACCACCCAGGAGGAGCCCAGGAAAGGCCGCAGGCACCGCGCGGGAGATaGCCGGCTCCAGCTCCTGCA +
Preference number: 4 (lower is better)
Translates to: FAVIGPVYHPGGAQERPQAPRGR*PAPAPA
Trigger: TGCAGGAGCTGGAGCCGGTCATCTCCCGCGCGGTGC...CTGCGGCCTTTCCTGGGCTCCTCCTGGGTGGTATACGGGACCAATTACCGCAAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000463577.2
ENST00000493439.1
ENST00000496460.5
CDS-3UTR TCA 90 bp GAGGAGAAGAGCTGCTCGTCTTCAGGGAAGAAGGTGGTGCTGTCCAGCACAGCCCAGCCGCCATCCGGGTaGGGCCCGAGCTCGTTGTGG +
Preference number: 4 (lower is better)
Translates to: EEKSCSSSGKKVVLSSTAQPPSG*GPSSLW
Trigger: CCACAACGAGCTCGGGCCTCACCCGGATGGCGGCTG...GGCTGTGCTGGACAGCACCACCTTCTTCCCTGAAGACGAGCAGCTCTTCTCCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496460.5
CDS-3UTR GCA 90 bp AAGGGGCAAGGGTGGCAGACTGAGGAGGGAGCACCGCCACGAGCCACAGTCCCTAAAAGGCGCCCAAGGTaGAGCGCAGGGAAGCCAGGT +
Preference number: 4 (lower is better)
Translates to: KGQGWQTEEGAPPRATVPKRRPR*SAGKPG
Trigger: ACCTGGCTTCCCTGCGCTGCACCTTGGGCGCCTTTT...AGGGACTGTGGCTCGTGGCGGTGCTCCCTCCTCAGTCTGCCACCCTTGCCCCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000373284.10
ENST00000463577.2
CDS-3UTR GCA 90 bp GCTGCGCCACGCCTCCAATGCCACCTGGTTGATCTGCTTGCCACCCGTGTTGCTTCGTTGAGCACGCAGTaGCGGACGTGGTGCCGCTGG +
Preference number: 4 (lower is better)
Translates to: AAPRLQCHLVDLLATRVASLSTQ*RTWCRW
Trigger: CCAGCGGCACCACGTCCGGCACTGCGTGCTCAACGA...AGCAACACGGGTGGCAAGCAGATCAACCAGGTGGCATTGGAGGCGTGGCGCAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373281.8
ENST00000463577.2
ENST00000493439.1
ENST00000496460.5
CDS-3UTR GCA 90 bp AGGGCCCTTCCTGGCCATCTGTCCCGTGGCCTAGCCGACACTCCGTTCATCTCAGCCCCTGGCCTTTCCTaGATGGCCTGGCCATCAGGG +
Preference number: 4 (lower is better)
Translates to: RALPGHLSRGLADTPFISAPGLS*MAWPSG
Trigger: CCCTGATGGCCAGGCCATGCAGGAAAGGCCAGGGGC...TGAGATGAACGGAGTGTCGGCTAGGCCACGGGACAGATGGCCAGGAAGGGCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000373284.10
ENST00000463256.5
ENST00000463577.2
ENST00000496460.5
CDS-3UTR CCA 90 bp GCAGGGCAGGATTGGACCCTCGCTTCCCCGCTGCCACCTGACATAGGAACATGGCGGCTTGGTGGGGGCTaGGTCCCGCACAAAGGCCTT +
Preference number: 4 (lower is better)
Translates to: AGQDWTLASPLPPDIGTWRLGGG*VPHKGL
Trigger: AAGGCCTTTGTGCGGGACCCAGCCCCCACCAAGCCG...CCATGTTCCTATGTCAGGTGGCAGCGGGGAAGCGAGGGTCCAATCCTGCCCTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373281.8
CDS-3UTR CCA 90 bp ACGGTGCGGGTTGTCCAGCACCGCGCGGGAGATGACCGGCTCCAGCTCCTGCAGGACTTCCATCAGGCCTaGGGGCATCTTGTCCATCTC +
Preference number: 4 (lower is better)
Translates to: TVRVVQHRAGDDRLQLLQDFHQA*GHLVHL
Trigger: GAGATGGACAAGATGCCCCCAGGCCTGATGGAAGTC...CTGCAGGAGCTGGAGCCGGTCATCTCCCGCGCGGTGCTGGACAACCCGCACCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373281.8
ENST00000463577.2
ENST00000493439.1
CDS-3UTR CCA 90 bp TCAGAGAGTCAGAGGAAGAAGGCGATTCGGGAGGCCACGGTCTTGCAGCCGTTGCGGACGTGGTGCCGCTaGAGCGGGAGGAAGGGCACC +
Preference number: 4 (lower is better)
Translates to: SESQRKKAIREATVLQPLRTWCR*SGRKGT
Trigger: GGTGCCCTTCCTCCCGCTCCAGCGGCACCACGTCCG...CAACGGCTGCAAGACCGTGGCCTCCCGAATCGCCTTCTTCCTCTGACTCTCTGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000463256.5
ENST00000463577.2
ENST00000496460.5
CDS-3UTR CCA 90 bp CTCAGAGAGTCAGAGGAAGAAGGCGATTCGGGAGGCCACGGTCTTGCAGCCGTTACGCAGTGCCGGACGTaGTGCCGCTGGAGCGGGAGG +
Preference number: 4 (lower is better)
Translates to: LRESEEEGDSGGHGLAAVTQCRT*CRWSGR
Trigger: CCTCCCGCTCCAGCGGCACCACGTCCGGCACTGCGT...AACGGCTGCAAGACCGTGGCCTCCCGAATCGCCTTCTTCCTCTGACTCTCTGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000463256.5
ENST00000463577.2
ENST00000496460.5
CDS-3UTR CCA 90 bp CCTGGCCATCTGTCCCGTGGCCTAGCCGACACTCCGTTCATCTCACTTGGTGCTGGCTCCAGGCCCAGCTaGGCCAGCTCGTTGAGCACG +
Preference number: 4 (lower is better)
Translates to: PGHLSRGLADTPFISLGAGSRPS*ASSLST
Trigger: CGTGCTCAACGAGCTGGCCCAGCTGGGCCTGGAGCC...AGCACCAAGTGAGATGAACGGAGTGTCGGCTAGGCCACGGGACAGATGGCCAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000373284.10
ENST00000463256.5
ENST00000463577.2
ENST00000496460.5
CDS-3UTR CCA 90 bp GAGGAAGAAGGCGATTCGGGAGGCCACGGTCTTGCAGCCGTTGGAGGAGAAGAGGGCTCCAGGCCCAGCTaGGCCAGCTCGTTGAGCACG +
Preference number: 4 (lower is better)
Translates to: EEEGDSGGHGLAAVGGEEGSRPS*ASSLST
Trigger: CGTGCTCAACGAGCTGGCCCAGCTGGGCCTGGAGCC...CTCTTCTCCTCCAACGGCTGCAAGACCGTGGCCTCCCGAATCGCCTTCTTCCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000463256.5
ENST00000463577.2
ENST00000496460.5
CDS-3UTR CCA 90 bp CCATCTGTCCCGTGGCCTAGCCGACACTCCGTTCATCTCACTTGGTGCTCTGGGGGCTCCAGGCCCAGCTaGGCCAGCTCGTTGAGCACG +
Preference number: 4 (lower is better)
Translates to: PSVPWPSRHSVHLTWCSGGSRPS*ASSLST
Trigger: CGTGCTCAACGAGCTGGCCCAGCTGGGCCTGGAGCC...CCCAGAGCACCAAGTGAGATGAACGGAGTGTCGGCTAGGCCACGGGACAGATGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000373284.10
ENST00000463256.5
ENST00000463577.2
ENST00000496460.5
CDS-3UTR CCA 90 bp GGACGTGGTGCCGCTGGAGCGGGAGGAAGGGCACCACTGCGTCTAGGAGGCGCTTCTCACTTGGTGCTCTaGGTTCCTGTGACAGAGGCC +
Preference number: 4 (lower is better)
Translates to: GRGAAGAGGRAPLRLGGASHLVL*VPVTEA
Trigger: GGCCTCTGTCACAGGAACCCAGAGCACCAAGTGAGA...AGCGCCTCCTAGACGCAGTGGTGCCCTTCCTCCCGCTCCAGCGGCACCACGTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373281.8
ENST00000463256.5
ENST00000463577.2
ENST00000496460.5
CDS-3UTR CCA 90 bp CCCTGGGGAAGGTGGCCGGGGCCAAGATGCTCTCGAGCCAGTTTAGAGGCCAGGTGGCCATCTGTCCCGTaGCCTAGCCGACACTCCGTT +
Preference number: 4 (lower is better)
Translates to: PWGRWPGPRCSRASLEARWPSVP*PSRHSV
Trigger: AACGGAGTGTCGGCTAGGCCACGGGACAGATGGCCA...CCTGGCCTCTAAACTGGCTCGAGAGCATCTTGGCCCCGGCCACCTTCCCCAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000373284.10
ENST00000463256.5
ENST00000463577.2
CDS-3UTR CCA 90 bp CCATCTGTCCCGTGGCCTAGCCGACACTCCGTTCATCTCACTTGGTGCTCTGGGGACCAGGGGTTTCCCTaGGGAAGGTGGCCGGGGCCA +
Preference number: 4 (lower is better)
Translates to: PSVPWPSRHSVHLTWCSGDQGFP*GRWPGP
Trigger: TGGCCCCGGCCACCTTCCCCAGGGAAACCCCTGGTC...CCCAGAGCACCAAGTGAGATGAACGGAGTGTCGGCTAGGCCACGGGACAGATGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000373284.10
ENST00000463256.5
ENST00000463577.2
CDS-3UTR CCA 90 bp AAGGTGGCCGGGGCCAAGATGCTCTCGAGCCAGTTTAGAGGCCAGGGCCCTTCCGGCAAGGGGCAAGGGTaGCAGACTGAGGAGGGAGCA +
Preference number: 4 (lower is better)
Translates to: KVAGAKMLSSQFRGQGPSGKGQG*QTEEGA
Trigger: TGCTCCCTCCTCAGTCTGCCACCCTTGCCCCTTGCC...GGAAGGGCCCTGGCCTCTAAACTGGCTCGAGAGCATCTTGGCCCCGGCCACCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000373284.10
ENST00000463577.2
CDS-3UTR TCA 90 bp TGCCGCTGGAGCGGGAGGAAGGGCACCACTGCGTCTAGGAGGCGCTCTTCCATGGGAGGCGCTCTTCCATaGTGCCCGAGTTTGAGAAGC +
Preference number: 4 (lower is better)
Translates to: CRWSGRKGTTASRRRSSMGGALP*CPSLRS
Trigger: GCTTCTCAAACTCGGGCATCATGGAAGAGCGCCTCC...CATGGAAGAGCGCCTCCTAGACGCAGTGGTGCCCTTCCTCCCGCTCCAGCGGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000373281.8
ENST00000463256.5
ENST00000463577.2
ENST00000493439.1
ENST00000496460.5
CDS-3UTR TCA 90 bp AGCTGCTCGTCTTCAGGGAAGAAGGTGGTGCTGTCCAGCACAGCCTGGACAACCGCTGGGCCAGCTCGTTaGGCACGCAGTGCCGGACGT +
Preference number: 4 (lower is better)
Translates to: SCSSSGKKVVLSSTAWTTAGPAR*ARSAGR
Trigger: ACGTCCGGCACTGCGTGCTCAACGAGCTGGCCCAGC...GGTTGTCCAGGCTGTGCTGGACAGCACCACCTTCTTCCCTGAAGACGAGCAGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000463256.5
ENST00000463577.2
ENST00000496460.5
CDS-3UTR TCA 90 bp CACCACTCAGAGAGTCAGAGGAAGAAGGCGATTCGGGAGGCCACGGTCTTGCAGGCTGGGCCAGCTCGTTaGGCACGCAGTGCCGGACGT +
Preference number: 4 (lower is better)
Translates to: HHSESQRKKAIREATVLQAGPAR*ARSAGR
Trigger: ACGTCCGGCACTGCGTGCTCAACGAGCTGGCCCAGC...CTGCAAGACCGTGGCCTCCCGAATCGCCTTCTTCCTCTGACTCTCTGAGTGGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000463256.5
ENST00000463577.2
ENST00000496460.5
CDS-3UTR TCA 90 bp CACTTGGTGCTCTGGGTTCCTGTGACAGAGGCCCCTGGCCTTTCCTGCATGGCCAGTGAGGTTCTGGGGTaGCCAGGGGTTTCCCTGGGG +
Preference number: 4 (lower is better)
Translates to: HLVLWVPVTEAPGLSCMASEVLG*PGVSLG
Trigger: CCCCAGGGAAACCCCTGGTCACCCCAGAACCTCACT...GGCCATGCAGGAAAGGCCAGGGGCCTCTGTCACAGGAACCCAGAGCACCAAGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000373284.10
ENST00000463256.5
ENST00000463577.2
CDS-3UTR TCA 90 bp GGGCAAGGGTGGCAGACTGAGGAGGGAGCACCGCCACGAGCCACAGTCCCTGAGGCCCAAGTGGCAGCTTaGGTCCCTCCATTTCTGGAA +
Preference number: 4 (lower is better)
Translates to: GQGWQTEEGAPPRATVPEAQVAA*VPPFLE
Trigger: TTCCAGAAATGGAGGGACTCAAGCTGCCACTTGGGC...CTCAGGGACTGTGGCTCGTGGCGGTGCTCCCTCCTCAGTCTGCCACCCTTGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000373284.10
ENST00000463577.2
CDS-3UTR TCA 90 bp TGCCGCTGGAGCGGGAGGAAGGGCACCACTGCGTCTAGGAGGCGCTCTTCCATGTTCCCCGCTGCCACCTaGCATAGGAACATGGCTCAG +
Preference number: 4 (lower is better)
Translates to: CRWSGRKGTTASRRRSSMFPAAT*HRNMAQ
Trigger: CTGAGCCATGTTCCTATGTCAGGTGGCAGCGGGGAA...CATGGAAGAGCGCCTCCTAGACGCAGTGGTGCCCTTCCTCCCGCTCCAGCGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373281.8
ENST00000463577.2
CDS-3UTR TCA 90 bp ATCTCACTTGGTGCTCTGGGTTCCTGTGACAGAGGCCCCTGGCCTTTCCTGCATGCACCGCGCGGGAGATaGCCGGCTCCAGCTCCTGCA +
Preference number: 4 (lower is better)
Translates to: ISLGALGSCDRGPWPFLHAPRGR*PAPAPA
Trigger: TGCAGGAGCTGGAGCCGGTCATCTCCCGCGCGGTGC...ATGCAGGAAAGGCCAGGGGCCTCTGTCACAGGAACCCAGAGCACCAAGTGAGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373281.8
ENST00000373284.10
ENST00000463577.2
ENST00000496460.5
CDS-3UTR GCA 90 bp CTGGGTGTAGGACTCAGGGGCTGTAAGGCTCACCCAAAGTCACAAAGCTGGGAGGTGCCGGTCCAGCCGTaGAGGGAGAGGACCAGCGGC +
Preference number: 4 (lower is better)
Translates to: LGVGLRGCKAHPKSQSWEVPVQP*RERTSG
Trigger: GCCGCTGGTCCTCTCCCTGCACGGCTGGACCGGCAC...CTCCCAGCTTTGTGACTTTGGGTGAGCCTTACAGCCCCTGAGTCCTACACCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373281.8
CDS-3UTR GCA 90 bp GAGCTGCTCGTCTTCAGGGAAGAAGGTGGTGCTGTCCAGCACAGCCTGGACAACCAGTGCCGGACGTGGTaGCGCTGGAGCGGGAGGAAG +
Preference number: 4 (lower is better)
Translates to: ELLVFREEGGAVQHSLDNQCRTW*RWSGRK
Trigger: CTTCCTCCCGCTCCAGCGGCACCACGTCCGGCACTG...GTTGTCCAGGCTGTGCTGGACAGCACCACCTTCTTCCCTGAAGACGAGCAGCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000463256.5
ENST00000463577.2
ENST00000496460.5
CDS-3UTR GCA 90 bp CTTCCTGGCCATCTGTCCCGTGGCCTAGCCGACACTCCGTTCATCTCACTTGGTCAGTGCCGGACGTGGTaGCGCTGGAGCGGGAGGAAG +
Preference number: 4 (lower is better)
Translates to: LPGHLSRGLADTPFISLGQCRTW*RWSGRK
Trigger: CTTCCTCCCGCTCCAGCGGCACCACGTCCGGCACTG...ACCAAGTGAGATGAACGGAGTGTCGGCTAGGCCACGGGACAGATGGCCAGGAAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000373284.10
ENST00000463256.5
ENST00000463577.2
ENST00000496460.5
CDS-3UTR GCA 90 bp CCATCTGTCCCGTGGCCTAGCCGACACTCCGTTCATCTCACTTGGTGCTCTGGGTCGTTGAGCACGCAGTaGCGGACGTGGTGCCGCTGG +
Preference number: 4 (lower is better)
Translates to: PSVPWPSRHSVHLTWCSGSLSTQ*RTWCRW
Trigger: CCAGCGGCACCACGTCCGGCACTGCGTGCTCAACGA...CCCAGAGCACCAAGTGAGATGAACGGAGTGTCGGCTAGGCCACGGGACAGATGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000373284.10
ENST00000463256.5
ENST00000463577.2
ENST00000496460.5
CDS-3UTR GCA 90 bp CGATTCGGGAGGCCACGGTCTTGCAGCCGTTGGAGGAGAAGAGCTGCTCGTCTTTCGTTGAGCACGCAGTaGCGGACGTGGTGCCGCTGG +
Preference number: 4 (lower is better)
Translates to: RFGRPRSCSRWRRRAARLSLSTQ*RTWCRW
Trigger: CCAGCGGCACCACGTCCGGCACTGCGTGCTCAACGA...AAGACGAGCAGCTCTTCTCCTCCAACGGCTGCAAGACCGTGGCCTCCCGAATCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000463256.5
ENST00000463577.2
ENST00000496460.5
CDS-3UTR GCA 90 bp TGGAGCGGGAGGAAGGGCACCACTGCGTCTAGGAGGCGCTCTTCCATGATGCCCGGGAGGCCACGGTCTTaGAGCCGTTGGAGGAGAAGA +
Preference number: 4 (lower is better)
Translates to: WSGRKGTTASRRRSSMMPGRPRS*SRWRRR
Trigger: TCTTCTCCTCCAACGGCTGCAAGACCGTGGCCTCCC...GGGCATCATGGAAGAGCGCCTCCTAGACGCAGTGGTGCCCTTCCTCCCGCTCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373281.8
ENST00000463256.5
ENST00000463577.2
ENST00000496460.5
CDS-3UTR GCA 90 bp GTCAGAGGAAGAAGGCGATTCGGGAGGCCACGGTCTTGCAGCCGTTGGAGGAGAGCCCCTGGCCTTTCCTaGATGGCCTGGCCATCAGGG +
Preference number: 4 (lower is better)
Translates to: VRGRRRFGRPRSCSRWRRAPGLS*MAWPSG
Trigger: CCCTGATGGCCAGGCCATGCAGGAAAGGCCAGGGGC...TCTCCTCCAACGGCTGCAAGACCGTGGCCTCCCGAATCGCCTTCTTCCTCTGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000463256.5
ENST00000463577.2
ENST00000496460.5
CDS-3UTR GCA 90 bp GGCCAGGGCCCTTCCTGGCCATCTGTCCCGTGGCCTAGCCGACACTCCGTTCATGCGCCACGCCTCCAATaGCACCTGGTTGATCTGCTT +
Preference number: 4 (lower is better)
Translates to: GQGPSWPSVPWPSRHSVHAPRLQ*HLVDLL
Trigger: AAGCAGATCAACCAGGTGGCATTGGAGGCGTGGCGC...ATGAACGGAGTGTCGGCTAGGCCACGGGACAGATGGCCAGGAAGGGCCCTGGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373281.8
ENST00000373284.10
ENST00000463577.2
ENST00000496460.5
CDS-3UTR GCA 90 bp CCCTGGGGAAGGTGGCCGGGGCCAAGATGCTCTCGAGCCAGTTTAGAGGCCAGGGCCACCTGGTTGATCTaGTTGCCACCCGTGTTGCTG +
Preference number: 4 (lower is better)
Translates to: PWGRWPGPRCSRASLEARATWLI*LPPVLL
Trigger: CAGCAACACGGGTGGCAAGCAGATCAACCAGGTGGC...CCTGGCCTCTAAACTGGCTCGAGAGCATCTTGGCCCCGGCCACCTTCCCCAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373284.10
CDS-3UTR GCA 90 bp CCCTGGGGAAGGTGGCCGGGGCCAAGATGCTCTCGAGCCAGTTTAGAGGCCAGGTTTGAGAAGCCATGGTaGGGGTTGTCCAGCACCGCG +
Preference number: 4 (lower is better)
Translates to: PWGRWPGPRCSRASLEARFEKPW*GLSSTA
Trigger: CGCGGTGCTGGACAACCCGCACCATGGCTTCTCAAA...CCTGGCCTCTAAACTGGCTCGAGAGCATCTTGGCCCCGGCCACCTTCCCCAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000373284.10
CDS-3UTR CCA 90 bp GGCACCACTGCGTCTAGGAGGCGCTCTTCCATGATGCCCGAGTTTGAGAAGCCAGGACCAGCGGCTTGGTaGGGGCTGGGTCCCGCACAA +
Preference number: 4 (lower is better)
Translates to: GTTASRRRSSMMPEFEKPGPAAW*GLGPAQ
Trigger: TTGTGCGGGACCCAGCCCCCACCAAGCCGCTGGTCC...TGGCTTCTCAAACTCGGGCATCATGGAAGAGCGCCTCCTAGACGCAGTGGTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373281.8
CDS-3UTR CCA 90 bp GGACGTGGTGCCGCTGGAGCGGGAGGAAGGGCACCACTGCGTCTAGGAGGCGCTTGGCTTTGCGGTAATTaGTCCCGTATACCACCCAGG +
Preference number: 4 (lower is better)
Translates to: GRGAAGAGGRAPLRLGGAWLCGN*SRIPPR
Trigger: CCTGGGTGGTATACGGGACCAATTACCGCAAAGCCA...AGCGCCTCCTAGACGCAGTGGTGCCCTTCCTCCCGCTCCAGCGGCACCACGTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000373281.8
ENST00000463256.5
ENST00000463577.2
ENST00000493439.1
ENST00000496460.5
CDS-3UTR CCA 90 bp ATCTCACTTGGTGCTCTGGGTTCCTGTGACAGAGGCCCCTGGCCTTTCCTGCATCGGACGTGGTGCCGCTaGAGCGGGAGGAAGGGCACC +
Preference number: 4 (lower is better)
Translates to: ISLGALGSCDRGPWPFLHRTWCR*SGRKGT
Trigger: GGTGCCCTTCCTCCCGCTCCAGCGGCACCACGTCCG...ATGCAGGAAAGGCCAGGGGCCTCTGTCACAGGAACCCAGAGCACCAAGTGAGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000373284.10
ENST00000463256.5
ENST00000463577.2
ENST00000496460.5
CDS-3UTR CCA 90 bp TGCTCGTCTTCAGGGAAGAAGGTGGTGCTGTCCAGCACAGCCTGGACAACCTCAACGCAGTGCCGGACGTaGTGCCGCTGGAGCGGGAGG +
Preference number: 4 (lower is better)
Translates to: CSSSGKKVVLSSTAWTTSTQCRT*CRWSGR
Trigger: CCTCCCGCTCCAGCGGCACCACGTCCGGCACTGCGT...TGAGGTTGTCCAGGCTGTGCTGGACAGCACCACCTTCTTCCCTGAAGACGAGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373281.8
ENST00000463256.5
ENST00000463577.2
ENST00000496460.5
CDS-3UTR CCA 90 bp GGGGCATCATTATTGGCCCCGCTGTTCAGAAGCAGAGACAGAGGCTCAGAGAGGACGCAGTGCCGGACGTaGTGCCGCTGGAGCGGGAGG +
Preference number: 4 (lower is better)
Translates to: GASLLAPLFRSRDRGSERTQCRT*CRWSGR
Trigger: CCTCCCGCTCCAGCGGCACCACGTCCGGCACTGCGT...CCTCTCTGAGCCTCTGTCTCTGCTTCTGAACAGCGGGGCCAATAATGATGCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373281.8
ENST00000463577.2
CDS-3UTR CCA 90 bp GAAGCCATCTGCAGGAAGGGTAGGTGGGGAGGGGACTTTGTGCTTCACAAGAGGACGCAGTGCCGGACGTaGTGCCGCTGGAGCGGGAGG +
Preference number: 4 (lower is better)
Translates to: EAICRKGRWGGDFVLHKRTQCRT*CRWSGR
Trigger: CCTCCCGCTCCAGCGGCACCACGTCCGGCACTGCGT...CCTCTTGTGAAGCACAAAGTCCCCTCCCCACCTACCCTTCCTGCAGATGGCTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373281.8
ENST00000463577.2
ENST00000493439.1
CDS-3UTR CCA 90 bp AAGGGGCAAGGGTGGCAGACTGAGGAGGGAGCACCGCCACGAGCCACAGTCCCTCGGTCTTGCAGCCGTTaGAGGAGAAGAGCTGCTCGT +
Preference number: 4 (lower is better)
Translates to: KGQGWQTEEGAPPRATVPRSCSR*RRRAAR
Trigger: ACGAGCAGCTCTTCTCCTCCAACGGCTGCAAGACCG...AGGGACTGTGGCTCGTGGCGGTGCTCCCTCCTCAGTCTGCCACCCTTGCCCCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000373284.10
ENST00000463577.2
CDS-3UTR CCA 90 bp GGCAAGGGTGGCAGACTGAGGAGGGAGCACCGCCACGAGCCACAGTCCCTGAGTCGGTCTTGCAGCCGTTaGAGGAGAAGAGCTGCTCGT +
Preference number: 4 (lower is better)
Translates to: GKGGRLRREHRHEPQSLSRSCSR*RRRAAR
Trigger: ACGAGCAGCTCTTCTCCTCCAACGGCTGCAAGACCG...ACTCAGGGACTGTGGCTCGTGGCGGTGCTCCCTCCTCAGTCTGCCACCCTTGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000373284.10
ENST00000463577.2
CDS-3UTR CCA 90 bp TGGAGCGGGAGGAAGGGCACCACTGCGTCTAGGAGGCGCTCTTCCATGATGCCCTTTCCCTGGGGAAGGTaGCCGGGGCCAAGATGCTCT +
Preference number: 4 (lower is better)
Translates to: WSGRKGTTASRRRSSMMPFPWGR*PGPRCS
Trigger: AGAGCATCTTGGCCCCGGCCACCTTCCCCAGGGAAA...GGGCATCATGGAAGAGCGCCTCCTAGACGCAGTGGTGCCCTTCCTCCCGCTCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373281.8
ENST00000463256.5
ENST00000463577.2
CDS-3UTR CCA 90 bp AGGTGGCCGGGGCCAAGATGCTCTCGAGCCAGTTTAGAGGCCAGGGCCCTTCCTTTTCCCTGGGGAAGGTaGCCGGGGCCAAGATGCTCT +
Preference number: 4 (lower is better)
Translates to: RWPGPRCSRASLEARALPFPWGR*PGPRCS
Trigger: AGAGCATCTTGGCCCCGGCCACCTTCCCCAGGGAAA...AGGAAGGGCCCTGGCCTCTAAACTGGCTCGAGAGCATCTTGGCCCCGGCCACCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000373284.10
ENST00000463256.5
ENST00000463577.2
CDS-3UTR CCA 90 bp GAGGAGAAGAGCTGCTCGTCTTCAGGGAAGAAGGTGGTGCTGTCCAGCACAGCCGACCAGGGGTTTCCCTaGGGAAGGTGGCCGGGGCCA +
Preference number: 4 (lower is better)
Translates to: EEKSCSSSGKKVVLSSTADQGFP*GRWPGP
Trigger: TGGCCCCGGCCACCTTCCCCAGGGAAACCCCTGGTC...GGCTGTGCTGGACAGCACCACCTTCTTCCCTGAAGACGAGCAGCTCTTCTCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000463256.5
ENST00000463577.2
CDS-3UTR CCA 90 bp AGGTGGCCGGGGCCAAGATGCTCTCGAGCCAGTTTAGAGGCCAGGGCCCTTCCTGGCTCAGTGAGGTTCTaGGGTGACCAGGGGTTTCCC +
Preference number: 4 (lower is better)
Translates to: RWPGPRCSRASLEARALPGSVRF*GDQGFP
Trigger: GGGAAACCCCTGGTCACCCCAGAACCTCACTGAGCC...AGGAAGGGCCCTGGCCTCTAAACTGGCTCGAGAGCATCTTGGCCCCGGCCACCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000373284.10
ENST00000463256.5
ENST00000463577.2
CDS-3UTR CCA 90 bp CTTGGTGCTCTGGGTTCCTGTGACAGAGGCCCCTGGCCTTTCCTGCATGGCCTGGGCAAGGGGCAAGGGTaGCAGACTGAGGAGGGAGCA +
Preference number: 4 (lower is better)
Translates to: LGALGSCDRGPWPFLHGLGKGQG*QTEEGA
Trigger: TGCTCCCTCCTCAGTCTGCCACCCTTGCCCCTTGCC...CAGGCCATGCAGGAAAGGCCAGGGGCCTCTGTCACAGGAACCCAGAGCACCAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000373284.10
ENST00000463577.2
CDS-3UTR CCA 90 bp CACTTGGTGCTCTGGGTTCCTGTGACAGAGGCCCCTGGCCTTTCCTGCATGGCCGGAGGGGAGGAGGTATaGTGCCCGACCAAGGAGGCA +
Preference number: 4 (lower is better)
Translates to: HLVLWVPVTEAPGLSCMAGGEEV*CPTKEA
Trigger: TGCCTCCTTGGTCGGGCACCATACCTCCTCCCCTCC...GGCCATGCAGGAAAGGCCAGGGGCCTCTGTCACAGGAACCCAGAGCACCAAGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000373284.10
ENST00000463577.2
CDS-3UTR CCA 90 bp CCCTGGGGAAGGTGGCCGGGGCCAAGATGCTCTCGAGCCAGTTTAGAGGCCAGGCCACCTGGCTTGATATaGACACAGGGTGTGGGGTGG +
Preference number: 4 (lower is better)
Translates to: PWGRWPGPRCSRASLEARPPGLI*TQGVGW
Trigger: CCACCCCACACCCTGTGTCCATATCAAGCCAGGTGG...CCTGGCCTCTAAACTGGCTCGAGAGCATCTTGGCCCCGGCCACCTTCCCCAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000373284.10
ENST00000463577.2
CDS-3UTR CCA 90 bp TGCCGCTGGAGCGGGAGGAAGGGCACCACTGCGTCTAGGAGGCGCTCTTCCATGGCCTCCAATGCCACCTaGTTGATCTGCTTGCCACCC +
Preference number: 4 (lower is better)
Translates to: CRWSGRKGTTASRRRSSMASNAT*LICLPP
Trigger: GGGTGGCAAGCAGATCAACCAGGTGGCATTGGAGGC...CATGGAAGAGCGCCTCCTAGACGCAGTGGTGCCCTTCCTCCCGCTCCAGCGGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373281.8
ENST00000463577.2
ENST00000493439.1
ENST00000496460.5
CDS-3UTR CCA 90 bp CACGCCTCCAATGCCACCTGGTTGATCTGCTTGCCACCCGTGTTGCTGATGAAGCCTGGCCCCTGGGTGTaGGGTGAAGCTGCCCGGGAG +
Preference number: 4 (lower is better)
Translates to: HASNATWLICLPPVLLMKPGPWV*GEAARE
Trigger: CTCCCGGGCAGCTTCACCCCACACCCAGGGGCCAGG...CTTCATCAGCAACACGGGTGGCAAGCAGATCAACCAGGTGGCATTGGAGGCGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493439.1
CDS-3UTR TCA 90 bp TCAGAGAGTCAGAGGAAGAAGGCGATTCGGGAGGCCACGGTCTTGCAGCCGTTGTGGCCGGCCAGGTGCTaGGCCAGGTCACACTCCAGA +
Preference number: 4 (lower is better)
Translates to: SESQRKKAIREATVLQPLWPARC*ARSHSR
Trigger: TCTGGAGTGTGACCTGGCTCAGCACCTGGCCGGCCA...CAACGGCTGCAAGACCGTGGCCTCCCGAATCGCCTTCTTCCTCTGACTCTCTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336067.10
ENST00000373281.8
CDS-3UTR TCA 90 bp CGATTCGGGAGGCCACGGTCTTGCAGCCGTTGGAGGAGAAGAGCTGCTCGTCTTGCGCCAGCAGGGAGCTaGCATAGGATTTGCCGGTGC +
Preference number: 4 (lower is better)
Translates to: RFGRPRSCSRWRRRAARLAPAGS*HRICRC
Trigger: GCACCGGCAAATCCTATGTCAGCTCCCTGCTGGCGC...AAGACGAGCAGCTCTTCTCCTCCAACGGCTGCAAGACCGTGGCCTCCCGAATCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336067.10
ENST00000373281.8
CDS-3UTR TCA 90 bp CCTTCCTGGCCATCTGTCCCGTGGCCTAGCCGACACTCCGTTCATCTCACTTGGAGTGAGGTTCTGGGGTaGCCAGGGGTTTCCCTGGGG +
Preference number: 4 (lower is better)
Translates to: PSWPSVPWPSRHSVHLTWSEVLG*PGVSLG
Trigger: CCCCAGGGAAACCCCTGGTCACCCCAGAACCTCACT...CCAAGTGAGATGAACGGAGTGTCGGCTAGGCCACGGGACAGATGGCCAGGAAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000373284.10
ENST00000463256.5
ENST00000463577.2
CDS-3UTR TCA 90 bp GAGTCAGAGGAAGAAGGCGATTCGGGAGGCCACGGTCTTGCAGCCGTTGGAGGAAGTGAGGTTCTGGGGTaGCCAGGGGTTTCCCTGGGG +
Preference number: 4 (lower is better)
Translates to: ESEEEGDSGGHGLAAVGGSEVLG*PGVSLG
Trigger: CCCCAGGGAAACCCCTGGTCACCCCAGAACCTCACT...TCCTCCAACGGCTGCAAGACCGTGGCCTCCCGAATCGCCTTCTTCCTCTGACTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000463256.5
ENST00000463577.2
CDS-3UTR GCA 90 bp GCCCTTCCTGGCCATCTGTCCCGTGGCCTAGCCGACACTCCGTTCATCTCACTTCATAGGATTTGCCGGTaGCGGTCCAGCCGTGCAGGG +
Preference number: 4 (lower is better)
Translates to: ALPGHLSRGLADTPFISLHRICR*RSSRAG
Trigger: CCCTGCACGGCTGGACCGGCACCGGCAAATCCTATG...AAGTGAGATGAACGGAGTGTCGGCTAGGCCACGGGACAGATGGCCAGGAAGGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000373284.10
CDS-3UTR GCA 90 bp GAAAAATGCTGGCCTCAGTTCCCTCAGCCGCCTTCTGGGTGTAGGACTCAGGGGACGGGAGAAAAGTGGTaGACGCGGGGGCTGCGGAGG +
Preference number: 4 (lower is better)
Translates to: EKCWPQFPQPPSGCRTQGTGEKW*TRGLRR
Trigger: CCTCCGCAGCCCCCGCGTGCACCACTTTTCTCCCGT...CCCCTGAGTCCTACACCCAGAAGGCGGCTGAGGGAACTGAGGCCAGCATTTTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000373281.8
CDS-3UTR GCA 90 bp GGGGCCGAGGACACCACTCAGAGAGTCAGAGGAAGAAGGCGATTCGGGAGGCCAGGGAGGCCACGGTCTTaGAGCCGTTGGAGGAGAAGA +
Preference number: 4 (lower is better)
Translates to: GAEDTTQRVRGRRRFGRPGRPRS*SRWRRR
Trigger: TCTTCTCCTCCAACGGCTGCAAGACCGTGGCCTCCC...TGGCCTCCCGAATCGCCTTCTTCCTCTGACTCTCTGAGTGGTGTCCTCGGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000463256.5
ENST00000463577.2
ENST00000496460.5
CDS-3UTR GCA 90 bp GCTGCTCGTCTTCAGGGAAGAAGGTGGTGCTGTCCAGCACAGCCTGGACAACCTGCCCCTGGCCTTTCCTaGATGGCCTGGCCATCAGGG +
Preference number: 4 (lower is better)
Translates to: AARLQGRRWCCPAQPGQPAPGLS*MAWPSG
Trigger: CCCTGATGGCCAGGCCATGCAGGAAAGGCCAGGGGC...AGGTTGTCCAGGCTGTGCTGGACAGCACCACCTTCTTCCCTGAAGACGAGCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373281.8
ENST00000463256.5
ENST00000463577.2
ENST00000496460.5
CDS-3UTR GCA 90 bp CAGGGAAGAAGGTGGTGCTGTCCAGCACAGCCTGGACAACCTCATCCCTTGGCTGCCCCTGGCCTTTCCTaGATGGCCTGGCCATCAGGG +
Preference number: 4 (lower is better)
Translates to: QGRRWCCPAQPGQPHPLAAPGLS*MAWPSG
Trigger: CCCTGATGGCCAGGCCATGCAGGAAAGGCCAGGGGC...AGCCAAGGGATGAGGTTGTCCAGGCTGTGCTGGACAGCACCACCTTCTTCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373281.8
ENST00000463256.5
ENST00000463577.2
ENST00000496460.5
CDS-3UTR GCA 90 bp TCCTGGCCATCTGTCCCGTGGCCTAGCCGACACTCCGTTCATCTCACTTGGTGCGGGGAGGAGGTATGGTaGCCGACCAAGGAGGCAAGG +
Preference number: 4 (lower is better)
Translates to: SWPSVPWPSRHSVHLTWCGEEVW*PTKEAR
Trigger: CCTTGCCTCCTTGGTCGGGCACCATACCTCCTCCCC...GCACCAAGTGAGATGAACGGAGTGTCGGCTAGGCCACGGGACAGATGGCCAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000373284.10
ENST00000463577.2
CDS-3UTR GCA 90 bp AAGTGGCAGCTTGAGTCCCTCCATTTCTGGAAACTGAGAAGGCTCCACCTGGCTCGCGGTCCCGCCGGCTaGGCCACGCCTCCAATGCCA +
Preference number: 4 (lower is better)
Translates to: KWQLESLHFWKLRRLHLARGPAG*ATPPMP
Trigger: TGGCATTGGAGGCGTGGCGCAGCCGGCGGGACCGCG...AGCCAGGTGGAGCCTTCTCAGTTTCCAGAAATGGAGGGACTCAAGCTGCCACTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373281.8
ENST00000373284.10
ENST00000463577.2
CDS-3UTR CCA 90 bp GGGAAGGTGGCCGGGGCCAAGATGCTCTCGAGCCAGTTTAGAGGCCAGGGCCCTGCAGTGAGGTTCCCTTaGACCCAGCTCTTCAGATCC +
Preference number: 4 (lower is better)
Translates to: GKVAGAKMLSSQFRGQGPAVRFP*TQLFRS
Trigger: GGATCTGAAGAGCTGGGTCCAAGGGAACCTCACTGC...AGGGCCCTGGCCTCTAAACTGGCTCGAGAGCATCTTGGCCCCGGCCACCTTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000373284.10
ENST00000463256.5
ENST00000463577.2
ENST00000496460.5
CDS-3UTR CCA 90 bp GGCAAGGGTGGCAGACTGAGGAGGGAGCACCGCCACGAGCCACAGTCCCTGAGTCTTCAGGGAAGAAGGTaGTGCTGTCCAGCACAGCCT +
Preference number: 4 (lower is better)
Translates to: GKGGRLRREHRHEPQSLSLQGRR*CCPAQP
Trigger: AGGCTGTGCTGGACAGCACCACCTTCTTCCCTGAAG...ACTCAGGGACTGTGGCTCGTGGCGGTGCTCCCTCCTCAGTCTGCCACCCTTGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000373284.10
ENST00000463577.2
CDS-3UTR CCA 90 bp AGCGGGAGGAAGGGCACCACTGCGTCTAGGAGGCGCTCTTCCATGATGCCCGAGCGGTCTTGCAGCCGTTaGAGGAGAAGAGCTGCTCGT +
Preference number: 4 (lower is better)
Translates to: SGRKGTTASRRRSSMMPERSCSR*RRRAAR
Trigger: ACGAGCAGCTCTTCTCCTCCAACGGCTGCAAGACCG...CTCGGGCATCATGGAAGAGCGCCTCCTAGACGCAGTGGTGCCCTTCCTCCCGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373281.8
ENST00000463256.5
ENST00000463577.2
ENST00000496460.5
CDS-3UTR CCA 90 bp GTTTCCCTGGGGAAGGTGGCCGGGGCCAAGATGCTCTCGAGCCAGTTTAGAGGCTGGCCATCTGTCCCGTaGCCTAGCCGACACTCCGTT +
Preference number: 4 (lower is better)
Translates to: VSLGKVAGAKMLSSQFRGWPSVP*PSRHSV
Trigger: AACGGAGTGTCGGCTAGGCCACGGGACAGATGGCCA...GCCTCTAAACTGGCTCGAGAGCATCTTGGCCCCGGCCACCTTCCCCAGGGAAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000373284.10
ENST00000463256.5
ENST00000463577.2
CDS-3UTR CCA 90 bp GAAGGCGATTCGGGAGGCCACGGTCTTGCAGCCGTTGGAGGAGAAGAGCTGCTCGGCTCAGTGAGGTTCTaGGGTGACCAGGGGTTTCCC +
Preference number: 4 (lower is better)
Translates to: EGDSGGHGLAAVGGEELLGSVRF*GDQGFP
Trigger: GGGAAACCCCTGGTCACCCCAGAACCTCACTGAGCC...GAGCAGCTCTTCTCCTCCAACGGCTGCAAGACCGTGGCCTCCCGAATCGCCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000463256.5
ENST00000463577.2
CDS-3UTR CCA 90 bp TTTCCCTGGGGAAGGTGGCCGGGGCCAAGATGCTCTCGAGCCAGTTTAGAGGCCGGCTCAGTGAGGTTCTaGGGTGACCAGGGGTTTCCC +
Preference number: 4 (lower is better)
Translates to: FPWGRWPGPRCSRASLEAGSVRF*GDQGFP
Trigger: GGGAAACCCCTGGTCACCCCAGAACCTCACTGAGCC...GGCCTCTAAACTGGCTCGAGAGCATCTTGGCCCCGGCCACCTTCCCCAGGGAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000373284.10
ENST00000463256.5
ENST00000463577.2
CDS-3UTR CCA 90 bp CAGGCCTGTGTCCTCCTCACCACAAAAGAGGGAAAACTTCTTGACCTGGCAGGGCCTGGCCCCTGGGTGTaGGGTGAAGCTGCCCGGGAG +
Preference number: 4 (lower is better)
Translates to: QACVLLTTKEGKLLDLAGPGPWV*GEAARE
Trigger: CTCCCGGGCAGCTTCACCCCACACCCAGGGGCCAGG...CCCTGCCAGGTCAAGAAGTTTTCCCTCTTTTGTGGTGAGGAGGACACAGGCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373281.8
ENST00000463577.2
3UTR CAA 72 bp TCCCGCCGGCTGCGCCACGCCTCCAATGCCACCTGGTaGATCTGCTTGCCACCCGTGTTGCTAAAACCATGG +
Preference number: 4 (lower is better)
Translates to: SRRLRHASNATW*ICLPPVLLKPW
Trigger: CCATGGTTTTAGCAACACGGGTGGCAAGCAGATCAACCAGGTGGCATTGGAGGCGTGGCGCAGCCGGCGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373281.8
ENST00000463577.2
3UTR CAA 72 bp TCCCGCCGGCTGCGCCACGCCTCCAATGCCACCTGGTaGATCTGCTTGCCACCCGTGTTGCTGATGAAGATG +
Preference number: 4 (lower is better)
Translates to: SRRLRHASNATW*ICLPPVLLMKM
Trigger: CATCTTCATCAGCAACACGGGTGGCAAGCAGATCAACCAGGTGGCATTGGAGGCGTGGCGCAGCCGGCGGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000493439.1
ENST00000496460.5
CDS-3UTR TCA 90 bp ACCACTGCGTCTAGGAGGCGCTCTTCCATGATGCCCGAGTTTGAGAAGCCATCTGCTGGGCCAGCTCGTTaGGCACGCAGTGCCGGACGT +
Preference number: 4 (lower is better)
Translates to: TTASRRRSSMMPEFEKPSAGPAR*ARSAGR
Trigger: ACGTCCGGCACTGCGTGCTCAACGAGCTGGCCCAGC...AGATGGCTTCTCAAACTCGGGCATCATGGAAGAGCGCCTCCTAGACGCAGTGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373281.8
ENST00000463256.5
ENST00000463577.2
CDS-3UTR TCA 90 bp CTCCAATGCCACCTGGTTGATCTGCTTGCCACCCGTGTTGCTAAAACCATGGGGGCAAGGGTGGCAGACTaGGGAGGGAGCACCGCCACG +
Preference number: 4 (lower is better)
Translates to: LQCHLVDLLATRVAKTMGARVAD*GGSTAT
Trigger: CGTGGCGGTGCTCCCTCCTCAGTCTGCCACCCTTGC...CCCCATGGTTTTAGCAACACGGGTGGCAAGCAGATCAACCAGGTGGCATTGGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373281.8
ENST00000463577.2
CDS-3UTR TCA 90 bp GGGGGCCGAGGACACCACTCAGAGAGTCAGAGGAAGAAGGCGATTCGGGAGGCCGCCCAAGTGGCAGCTTaGGTCCCTCCATTTCTGGAA +
Preference number: 4 (lower is better)
Translates to: GGRGHHSESQRKKAIREAAQVAA*VPPFLE
Trigger: TTCCAGAAATGGAGGGACTCAAGCTGCCACTTGGGC...GGCCTCCCGAATCGCCTTCTTCCTCTGACTCTCTGAGTGGTGTCCTCGGCCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000463577.2
CDS-3UTR TCA 90 bp GGGGCCGAGGACACCACTCAGAGAGTCAGAGGAAGAAGGCGATTCGGGAGGCCACGGAGCCATGCTGCCTaGGGAAACACAGCGAGGATT +
Preference number: 4 (lower is better)
Translates to: GAEDTTQRVRGRRRFGRPRSHAA*GNTARI
Trigger: AATCCTCGCTGTGTTTCCTCAGGCAGCATGGCTCCG...TGGCCTCCCGAATCGCCTTCTTCCTCTGACTCTCTGAGTGGTGTCCTCGGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373281.8
ENST00000463577.2
CDS-3UTR TCA 90 bp GCCAGGGCCCTTCCTGGCCATCTGTCCCGTGGCCTAGCCGACACTCCGTTCATCCTGACTTTCCCTCACTaGACTTCCAGGAAGGCATCG +
Preference number: 4 (lower is better)
Translates to: ARALPGHLSRGLADTPFILTFPH*TSRKAS
Trigger: CGATGCCTTCCTGGAAGTTCAGTGAGGGAAAGTCAG...GATGAACGGAGTGTCGGCTAGGCCACGGGACAGATGGCCAGGAAGGGCCCTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373281.8
ENST00000463577.2
CDS-3UTR TCA 90 bp GGGCAGGATTGGACCCTCGCTTCCCCGCTGCCACCTGACATAGGAACATGGCTCTTCCCCGCTGCCACCTaGCATAGGAACATGGCTCAG +
Preference number: 4 (lower is better)
Translates to: GQDWTLASPLPPDIGTWLFPAAT*HRNMAQ
Trigger: CTGAGCCATGTTCCTATGTCAGGTGGCAGCGGGGAA...GAGCCATGTTCCTATGTCAGGTGGCAGCGGGGAAGCGAGGGTCCAATCCTGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373281.8
ENST00000463577.2
CDS-3UTR GCA 90 bp GCCCTTCCTGGCCATCTGTCCCGTGGCCTAGCCGACACTCCGTTCATCTCACTTAAAAGGCGCCCAAGGTaGAGCGCAGGGAAGCCAGGT +
Preference number: 4 (lower is better)
Translates to: ALPGHLSRGLADTPFISLKRRPR*SAGKPG
Trigger: ACCTGGCTTCCCTGCGCTGCACCTTGGGCGCCTTTT...AAGTGAGATGAACGGAGTGTCGGCTAGGCCACGGGACAGATGGCCAGGAAGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000373284.10
ENST00000463256.5
ENST00000463577.2
ENST00000496460.5
CDS-3UTR GCA 90 bp AGACTGAGGAGGGAGCACCGCCACGAGCCACAGTCCCTGAGTTATAATTCACAGCAGTGCCGGACGTGGTaGCGCTGGAGCGGGAGGAAG +
Preference number: 4 (lower is better)
Translates to: RLRREHRHEPQSLSYNSQQCRTW*RWSGRK
Trigger: CTTCCTCCCGCTCCAGCGGCACCACGTCCGGCACTG...CTGTGAATTATAACTCAGGGACTGTGGCTCGTGGCGGTGCTCCCTCCTCAGTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000373284.10
ENST00000463577.2
CDS-3UTR GCA 90 bp ATCTCACTTGGTGCTCTGGGTTCCTGTGACAGAGGCCCCTGGCCTTTCCTGCATTCGTTGAGCACGCAGTaGCGGACGTGGTGCCGCTGG +
Preference number: 4 (lower is better)
Translates to: ISLGALGSCDRGPWPFLHSLSTQ*RTWCRW
Trigger: CCAGCGGCACCACGTCCGGCACTGCGTGCTCAACGA...ATGCAGGAAAGGCCAGGGGCCTCTGTCACAGGAACCCAGAGCACCAAGTGAGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000373284.10
ENST00000463256.5
ENST00000463577.2
ENST00000496460.5
CDS-3UTR GCA 90 bp CACGCCTCCAATGCCACCTGGTTGATCTGCTTGCCACCCGTGTTGCTGATGAAGTCGTTGAGCACGCAGTaGCGGACGTGGTGCCGCTGG +
Preference number: 4 (lower is better)
Translates to: HASNATWLICLPPVLLMKSLSTQ*RTWCRW
Trigger: CCAGCGGCACCACGTCCGGCACTGCGTGCTCAACGA...CTTCATCAGCAACACGGGTGGCAAGCAGATCAACCAGGTGGCATTGGAGGCGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000493439.1
ENST00000496460.5
CDS-3UTR GCA 90 bp CCTTCCTGGCCATCTGTCCCGTGGCCTAGCCGACACTCCGTTCATCTCACTTGGGGGAGGCCACGGTCTTaGAGCCGTTGGAGGAGAAGA +
Preference number: 4 (lower is better)
Translates to: PSWPSVPWPSRHSVHLTWGRPRS*SRWRRR
Trigger: TCTTCTCCTCCAACGGCTGCAAGACCGTGGCCTCCC...CCAAGTGAGATGAACGGAGTGTCGGCTAGGCCACGGGACAGATGGCCAGGAAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000373284.10
ENST00000463256.5
ENST00000463577.2
ENST00000496460.5
CDS-3UTR GCA 90 bp AGGGCCCTTCCTGGCCATCTGTCCCGTGGCCTAGCCGACACTCCGTTCATCTCATGGCCGGGGCCAAGATaGTCTCGAGCCAGTTTAGAG +
Preference number: 4 (lower is better)
Translates to: RALPGHLSRGLADTPFISWPGPR*SRASLE
Trigger: CTCTAAACTGGCTCGAGAGCATCTTGGCCCCGGCCA...TGAGATGAACGGAGTGTCGGCTAGGCCACGGGACAGATGGCCAGGAAGGGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000373284.10
ENST00000463256.5
ENST00000463577.2
ENST00000496460.5
CDS-3UTR GCA 90 bp GAGGAGAAGAGCTGCTCGTCTTCAGGGAAGAAGGTGGTGCTGTCCAGCACAGCCGGGGAGGAGGTATGGTaGCCGACCAAGGAGGCAAGG +
Preference number: 4 (lower is better)
Translates to: EEKSCSSSGKKVVLSSTAGEEVW*PTKEAR
Trigger: CCTTGCCTCCTTGGTCGGGCACCATACCTCCTCCCC...GGCTGTGCTGGACAGCACCACCTTCTTCCCTGAAGACGAGCAGCTCTTCTCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000463577.2
CDS-3UTR GCA 90 bp CTTGGTGCTCTGGGTTCCTGTGACAGAGGCCCCTGGCCTTTCCTGCATGGCCTGGCGCCACGCCTCCAATaGCACCTGGTTGATCTGCTT +
Preference number: 4 (lower is better)
Translates to: LGALGSCDRGPWPFLHGLAPRLQ*HLVDLL
Trigger: AAGCAGATCAACCAGGTGGCATTGGAGGCGTGGCGC...CAGGCCATGCAGGAAAGGCCAGGGGCCTCTGTCACAGGAACCCAGAGCACCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373281.8
ENST00000373284.10
ENST00000463577.2
ENST00000496460.5
CDS-3UTR GCA 90 bp GAAGCCATCTGCAGGAAGGGTAGGTGGGGAGGGGACTTTGTGCTTCACAAGAGGGAGCCAGACTCACGGTaGGGGTTGTCCAGCACCGCG +
Preference number: 4 (lower is better)
Translates to: EAICRKGRWGGDFVLHKREPDSR*GLSSTA
Trigger: CGCGGTGCTGGACAACCCGCACCGTGAGTCTGGCTC...CCTCTTGTGAAGCACAAAGTCCCCTCCCCACCTACCCTTCCTGCAGATGGCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373281.8
ENST00000463577.2
ENST00000493439.1
CDS-3UTR GCA 90 bp AGGTGGCCGGGGCCAAGATGCTCTCGAGCCAGTTTAGAGGCCAGGGCCCTTCCTGGGCAGGAGGAAAAATaGTGGCCTCAGTTCCCTCAG +
Preference number: 4 (lower is better)
Translates to: RWPGPRCSRASLEARALPGQEEK*WPQFPQ
Trigger: CTGAGGGAACTGAGGCCAGCATTTTTCCTCCTGCCC...AGGAAGGGCCCTGGCCTCTAAACTGGCTCGAGAGCATCTTGGCCCCGGCCACCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373281.8
ENST00000463577.2
CDS-3UTR CCA 90 bp ATCTCACTTGGTGCTCTGGGTTCCTGTGACAGAGGCCCCTGGCCTTTCCTGCATTCACCACCAGCGCCTTaGCCAGATGCTGGCCGGCCA +
Preference number: 4 (lower is better)
Translates to: ISLGALGSCDRGPWPFLHSPPAP*PDAGRP
Trigger: TGGCCGGCCAGCATCTGGCCAAGGCGCTGGTGGTGA...ATGCAGGAAAGGCCAGGGGCCTCTGTCACAGGAACCCAGAGCACCAAGTGAGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000373284.10
CDS-3UTR CCA 90 bp AAGTGGCAGCTTGAGTCCCTCCATTTCTGGAAACTGAGAAGGCTCCACCTGGCTCGGACGTGGTGCCGCTaGAGCGGGAGGAAGGGCACC +
Preference number: 4 (lower is better)
Translates to: KWQLESLHFWKLRRLHLARTWCR*SGRKGT
Trigger: GGTGCCCTTCCTCCCGCTCCAGCGGCACCACGTCCG...AGCCAGGTGGAGCCTTCTCAGTTTCCAGAAATGGAGGGACTCAAGCTGCCACTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000373284.10
ENST00000463577.2
CDS-3UTR CCA 90 bp GGGTTTCCCTGGGGAAGGTGGCCGGGGCCAAGATGCTCTCGAGCCAGTTTAGAGCTGTCCAGCACAGCCTaGACAACCTCATCCCTTGGC +
Preference number: 4 (lower is better)
Translates to: GFPWGRWPGPRCSRASLELSSTA*TTSSLG
Trigger: GCCAAGGGATGAGGTTGTCCAGGCTGTGCTGGACAG...CTCTAAACTGGCTCGAGAGCATCTTGGCCCCGGCCACCTTCCCCAGGGAAACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000373284.10
ENST00000463256.5
ENST00000463577.2
CDS-3UTR CCA 90 bp CAGTTTAGAGGCCAGGGCCCTTCCTGGCCATCTGTCCCGTGGCCTAGCCGACACCTTCAGGGAAGAAGGTaGTGCTGTCCAGCACAGCCT +
Preference number: 4 (lower is better)
Translates to: QFRGQGPSWPSVPWPSRHLQGRR*CCPAQP
Trigger: AGGCTGTGCTGGACAGCACCACCTTCTTCCCTGAAG...GTGTCGGCTAGGCCACGGGACAGATGGCCAGGAAGGGCCCTGGCCTCTAAACTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000373284.10
ENST00000463256.5
ENST00000463577.2
ENST00000496460.5
CDS-3UTR CCA 90 bp CACTTGGTGCTCTGGGTTCCTGTGACAGAGGCCCCTGGCCTTTCCTGCATGGCCCGGTCTTGCAGCCGTTaGAGGAGAAGAGCTGCTCGT +
Preference number: 4 (lower is better)
Translates to: HLVLWVPVTEAPGLSCMARSCSR*RRRAAR
Trigger: ACGAGCAGCTCTTCTCCTCCAACGGCTGCAAGACCG...GGCCATGCAGGAAAGGCCAGGGGCCTCTGTCACAGGAACCCAGAGCACCAAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000373284.10
ENST00000463256.5
ENST00000463577.2
ENST00000496460.5
CDS-3UTR CCA 90 bp GTTTCCCTGGGGAAGGTGGCCGGGGCCAAGATGCTCTCGAGCCAGTTTAGAGGCCGGTCTTGCAGCCGTTaGAGGAGAAGAGCTGCTCGT +
Preference number: 4 (lower is better)
Translates to: VSLGKVAGAKMLSSQFRGRSCSR*RRRAAR
Trigger: ACGAGCAGCTCTTCTCCTCCAACGGCTGCAAGACCG...GCCTCTAAACTGGCTCGAGAGCATCTTGGCCCCGGCCACCTTCCCCAGGGAAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000373284.10
ENST00000463256.5
ENST00000463577.2
CDS-3UTR CCA 90 bp GAGGAAGAAGGCGATTCGGGAGGCCACGGTCTTGCAGCCGTTGGAGGAGAAGAGTGGCCATCTGTCCCGTaGCCTAGCCGACACTCCGTT +
Preference number: 4 (lower is better)
Translates to: EEEGDSGGHGLAAVGGEEWPSVP*PSRHSV
Trigger: AACGGAGTGTCGGCTAGGCCACGGGACAGATGGCCA...CTCTTCTCCTCCAACGGCTGCAAGACCGTGGCCTCCCGAATCGCCTTCTTCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000463256.5
ENST00000463577.2
ENST00000496460.5
CDS-3UTR CCA 90 bp GAGGAAGAAGGCGATTCGGGAGGCCACGGTCTTGCAGCCGTTGGAGGAGAAGAGTTTCCCTGGGGAAGGTaGCCGGGGCCAAGATGCTCT +
Preference number: 4 (lower is better)
Translates to: EEEGDSGGHGLAAVGGEEFPWGR*PGPRCS
Trigger: AGAGCATCTTGGCCCCGGCCACCTTCCCCAGGGAAA...CTCTTCTCCTCCAACGGCTGCAAGACCGTGGCCTCCCGAATCGCCTTCTTCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000463256.5
ENST00000463577.2
CDS-3UTR CCA 90 bp GCCCTTCCTGGCCATCTGTCCCGTGGCCTAGCCGACACTCCGTTCATCTCACTTTTTCCCTGGGGAAGGTaGCCGGGGCCAAGATGCTCT +
Preference number: 4 (lower is better)
Translates to: ALPGHLSRGLADTPFISLFPWGR*PGPRCS
Trigger: AGAGCATCTTGGCCCCGGCCACCTTCCCCAGGGAAA...AAGTGAGATGAACGGAGTGTCGGCTAGGCCACGGGACAGATGGCCAGGAAGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000373284.10
ENST00000463256.5
ENST00000463577.2
CDS-3UTR CCA 90 bp GGAGAAGAGCTGCTCGTCTTCAGGGAAGAAGGTGGTGCTGTCCAGCACAGCCTGGGCAAGGGGCAAGGGTaGCAGACTGAGGAGGGAGCA +
Preference number: 4 (lower is better)
Translates to: GEELLVFREEGGAVQHSLGKGQG*QTEEGA
Trigger: TGCTCCCTCCTCAGTCTGCCACCCTTGCCCCTTGCC...CAGGCTGTGCTGGACAGCACCACCTTCTTCCCTGAAGACGAGCAGCTCTTCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000463577.2
CDS-3UTR CCA 90 bp GCTGCTCGTCTTCAGGGAAGAAGGTGGTGCTGTCCAGCACAGCCTGGACAACCTGGCAAGGGGCAAGGGTaGCAGACTGAGGAGGGAGCA +
Preference number: 4 (lower is better)
Translates to: AARLQGRRWCCPAQPGQPGKGQG*QTEEGA
Trigger: TGCTCCCTCCTCAGTCTGCCACCCTTGCCCCTTGCC...AGGTTGTCCAGGCTGTGCTGGACAGCACCACCTTCTTCCCTGAAGACGAGCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373281.8
ENST00000463577.2
CDS-3UTR CCA 90 bp TTTCCCTGGGGAAGGTGGCCGGGGCCAAGATGCTCTCGAGCCAGTTTAGAGGCCCCACCTGGCTTGATATaGACACAGGGTGTGGGGTGG +
Preference number: 4 (lower is better)
Translates to: FPWGRWPGPRCSRASLEAPPGLI*TQGVGW
Trigger: CCACCCCACACCCTGTGTCCATATCAAGCCAGGTGG...GGCCTCTAAACTGGCTCGAGAGCATCTTGGCCCCGGCCACCTTCCCCAGGGAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000373284.10
ENST00000463577.2
CDS-3UTR CCA 90 bp GCCAGGGCCCTTCCTGGCCATCTGTCCCGTGGCCTAGCCGACACTCCGTTCATCAAAACCAGGCCCAAGTaGCAGCTTGAGTCCCTCCAT +
Preference number: 4 (lower is better)
Translates to: ARALPGHLSRGLADTPFIKTRPK*QLESLH
Trigger: ATGGAGGGACTCAAGCTGCCACTTGGGCCTGGTTTT...GATGAACGGAGTGTCGGCTAGGCCACGGGACAGATGGCCAGGAAGGGCCCTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000373284.10
ENST00000463577.2
CDS-3UTR CCA 90 bp GCTGCCCGGGAGGGGGCTGCTGAGCCAGACTCACGGTGCGGGTTGTCCAGCACCGCTTCCACAAAGAAGTaGCGATCAAAAAGACTGAGC +
Preference number: 4 (lower is better)
Translates to: AAREGAAEPDSRCGLSSTASTKK*RSKRLS
Trigger: GCTCAGTCTTTTTGATCGCCACTTCTTTGTGGAAGC...GGTGCTGGACAACCCGCACCGTGAGTCTGGCTCAGCAGCCCCCTCCCGGGCAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000373281.8
ENST00000463577.2
CDS-3UTR CCA 90 bp CTGCGCCACGCCTCCAATGCCACCTGGTTGATCTGCTTGCCACCCGTGTTGCTGGCCTCCAATGCCACCTaGTTGATCTGCTTGCCACCC +
Preference number: 4 (lower is better)
Translates to: LRHASNATWLICLPPVLLASNAT*LICLPP
Trigger: GGGTGGCAAGCAGATCAACCAGGTGGCATTGGAGGC...CAGCAACACGGGTGGCAAGCAGATCAACCAGGTGGCATTGGAGGCGTGGCGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000493439.1
ENST00000496460.5
CDS-3UTR CCA 90 bp TCCTGGCCATCTGTCCCGTGGCCTAGCCGACACTCCGTTCATCTCACTTGGTGCGAACTGCCGGGTCAGTaGGCAAAGCATGAGACCCCG +
Preference number: 4 (lower is better)
Translates to: SWPSVPWPSRHSVHLTWCELPGQ*AKHETP
Trigger: CGGGGTCTCATGCTTTGCCCACTGACCCGGCAGTTC...GCACCAAGTGAGATGAACGGAGTGTCGGCTAGGCCACGGGACAGATGGCCAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373281.8
ENST00000463577.2
CDS-3UTR CCA 90 bp CCTTCCTGGCCATCTGTCCCGTGGCCTAGCCGACACTCCGTTCATCTCACTTGGGAACTGCCGGGTCAGTaGGCAAAGCATGAGACCCCG +
Preference number: 4 (lower is better)
Translates to: PSWPSVPWPSRHSVHLTWELPGQ*AKHETP
Trigger: CGGGGTCTCATGCTTTGCCCACTGACCCGGCAGTTC...CCAAGTGAGATGAACGGAGTGTCGGCTAGGCCACGGGACAGATGGCCAGGAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373281.8
ENST00000463577.2
3UTR CAA 72 bp CTGCGCCACGCCTCCAATGCCACCTGGTTGATCTGCTaGCCACCCGTGTTGCTAAAACCATGGGGGACCCAG +
Preference number: 4 (lower is better)
Translates to: LRHASNATWLIC*PPVLLKPWGTQ
Trigger: CTGGGTCCCCCATGGTTTTAGCAACACGGGTGGCAAGCAGATCAACCAGGTGGCATTGGAGGCGTGGCGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373281.8
ENST00000463577.2
CDS-3UTR TCA 90 bp CCCAAGTGGCAGCTTGAGTCCCTCCATTTCTGGAAACTGAGAAGGCTCCACCTGTGGCCGGCCAGGTGCTaGGCCAGGTCACACTCCAGA +
Preference number: 4 (lower is better)
Translates to: PKWQLESLHFWKLRRLHLWPARC*ARSHSR
Trigger: TCTGGAGTGTGACCTGGCTCAGCACCTGGCCGGCCA...CAGGTGGAGCCTTCTCAGTTTCCAGAAATGGAGGGACTCAAGCTGCCACTTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000373284.10
CDS-3UTR TCA 90 bp AGGAAGAAGGCGATTCGGGAGGCCACGGTCTTGCAGCCGTTGGAGGAGAAGAGCGGAGGCGCTCTTCCATaGTGCCCGAGTTTGAGAAGC +
Preference number: 4 (lower is better)
Translates to: RKKAIREATVLQPLEEKSGGALP*CPSLRS
Trigger: GCTTCTCAAACTCGGGCATCATGGAAGAGCGCCTCC...GCTCTTCTCCTCCAACGGCTGCAAGACCGTGGCCTCCCGAATCGCCTTCTTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000463256.5
ENST00000463577.2
ENST00000496460.5
CDS-3UTR TCA 90 bp AGAGGAAGAAGGCGATTCGGGAGGCCACGGTCTTGCAGCCGTTGGAGGAGAAGAGAGGTCAAGGCTCAGTaGGGTTCTGGGGTGACCAGG +
Preference number: 4 (lower is better)
Translates to: RGRRRFGRPRSCSRWRRREVKAQ*GSGVTR
Trigger: CCTGGTCACCCCAGAACCTCACTGAGCCTTGACCTC...TCTTCTCCTCCAACGGCTGCAAGACCGTGGCCTCCCGAATCGCCTTCTTCCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000463256.5
ENST00000463577.2
CDS-3UTR TCA 90 bp AGGTGGCCGGGGCCAAGATGCTCTCGAGCCAGTTTAGAGGCCAGGGCCCTTCCTAGAGGGAAAACTTCTTaGCCTGGCAGGGCTTCCACA +
Preference number: 4 (lower is better)
Translates to: RWPGPRCSRASLEARALPRGKTS*PGRAST
Trigger: TGTGGAAGCCCTGCCAGGTCAAGAAGTTTTCCCTCT...AGGAAGGGCCCTGGCCTCTAAACTGGCTCGAGAGCATCTTGGCCCCGGCCACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373281.8
ENST00000463577.2
CDS-3UTR TCA 90 bp CACTTGGTGCTCTGGGTTCCTGTGACAGAGGCCCCTGGCCTTTCCTGCATGGCCCATGATGCCCGAGTTTaGGAAGCCATGGTGCGGGTT +
Preference number: 4 (lower is better)
Translates to: HLVLWVPVTEAPGLSCMAHDARV*EAMVRV
Trigger: AACCCGCACCATGGCTTCTCAAACTCGGGCATCATG...GGCCATGCAGGAAAGGCCAGGGGCCTCTGTCACAGGAACCCAGAGCACCAAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373284.10
ENST00000496460.5
CDS-3UTR GCA 90 bp CACCACTCAGAGAGTCAGAGGAAGAAGGCGATTCGGGAGGCCACGGTCTTGCAGAAAAGGCGCCCAAGGTaGAGCGCAGGGAAGCCAGGT +
Preference number: 4 (lower is better)
Translates to: HHSESQRKKAIREATVLQKRRPR*SAGKPG
Trigger: ACCTGGCTTCCCTGCGCTGCACCTTGGGCGCCTTTT...CTGCAAGACCGTGGCCTCCCGAATCGCCTTCTTCCTCTGACTCTCTGAGTGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000463256.5
ENST00000463577.2
ENST00000496460.5
CDS-3UTR GCA 90 bp AGGAAGGGCACCACTGCGTCTAGGAGGCGCTCTTCCATGATGCCCGAGTTTGAGAAAAGGCGCCCAAGGTaGAGCGCAGGGAAGCCAGGT +
Preference number: 4 (lower is better)
Translates to: RKGTTASRRRSSMMPEFEKRRPR*SAGKPG
Trigger: ACCTGGCTTCCCTGCGCTGCACCTTGGGCGCCTTTT...CTCAAACTCGGGCATCATGGAAGAGCGCCTCCTAGACGCAGTGGTGCCCTTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373281.8
ENST00000463256.5
ENST00000463577.2
ENST00000493439.1
ENST00000496460.5
CDS-3UTR GCA 90 bp GTCCCTCCATTTCTGGAAACTGAGAAGGCTCCACCTGGCTTGATATGGACACAGGTGCCGGTCCAGCCGTaGAGGGAGAGGACCAGCGGC +
Preference number: 4 (lower is better)
Translates to: VPPFLETEKAPPGLIWTQVPVQP*RERTSG
Trigger: GCCGCTGGTCCTCTCCCTGCACGGCTGGACCGGCAC...CTGTGTCCATATCAAGCCAGGTGGAGCCTTCTCAGTTTCCAGAAATGGAGGGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000373284.10
CDS-3UTR GCA 90 bp TCAGAGGAAGAAGGCGATTCGGGAGGCCACGGTCTTGCAGCCGTTGGAGGAGAAGGGAGGCCACGGTCTTaGAGCCGTTGGAGGAGAAGA +
Preference number: 4 (lower is better)
Translates to: SEEEGDSGGHGLAAVGGEGRPRS*SRWRRR
Trigger: TCTTCTCCTCCAACGGCTGCAAGACCGTGGCCTCCC...TTCTCCTCCAACGGCTGCAAGACCGTGGCCTCCCGAATCGCCTTCTTCCTCTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000463256.5
ENST00000463577.2
ENST00000496460.5
CDS-3UTR GCA 90 bp TCAGAGAGTCAGAGGAAGAAGGCGATTCGGGAGGCCACGGTCTTGCAGCCGTTGGAGGCGGAGCCATGCTaGCTGAGGAAACACAGCGAG +
Preference number: 4 (lower is better)
Translates to: SESQRKKAIREATVLQPLEAEPC*LRKHSE
Trigger: CTCGCTGTGTTTCCTCAGGCAGCATGGCTCCGCCTC...CAACGGCTGCAAGACCGTGGCCTCCCGAATCGCCTTCTTCCTCTGACTCTCTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373281.8
ENST00000463577.2
CDS-3UTR GCA 90 bp TCCTGGCCATCTGTCCCGTGGCCTAGCCGACACTCCGTTCATCTCACTTGGTGCGCGCCACGCCTCCAATaGCACCTGGTTGATCTGCTT +
Preference number: 4 (lower is better)
Translates to: SWPSVPWPSRHSVHLTWCAPRLQ*HLVDLL
Trigger: AAGCAGATCAACCAGGTGGCATTGGAGGCGTGGCGC...GCACCAAGTGAGATGAACGGAGTGTCGGCTAGGCCACGGGACAGATGGCCAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373281.8
ENST00000373284.10
ENST00000463577.2
ENST00000496460.5
CDS-3UTR GCA 90 bp GCTGCGCCACGCCTCCAATGCCACCTGGTTGATCTGCTTGCCACCCGTGTTGCTGGGCAGGAGGAAAAATaGTGGCCTCAGTTCCCTCAG +
Preference number: 4 (lower is better)
Translates to: AAPRLQCHLVDLLATRVAGQEEK*WPQFPQ
Trigger: CTGAGGGAACTGAGGCCAGCATTTTTCCTCCTGCCC...AGCAACACGGGTGGCAAGCAGATCAACCAGGTGGCATTGGAGGCGTGGCGCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373281.8
ENST00000463577.2
ENST00000493439.1
CDS-3UTR GCA 90 bp GAGGAAGAAGGCGATTCGGGAGGCCACGGTCTTGCAGCCGTTGGAGGAGAAGAGGCCACCTGGTTGATCTaGTTGCCACCCGTGTTGCTG +
Preference number: 4 (lower is better)
Translates to: EEEGDSGGHGLAAVGGEEATWLI*LPPVLL
Trigger: CAGCAACACGGGTGGCAAGCAGATCAACCAGGTGGC...CTCTTCTCCTCCAACGGCTGCAAGACCGTGGCCTCCCGAATCGCCTTCTTCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496460.5
CDS-3UTR CCA 90 bp ACCAGGCCCAAGTGGCAGCTTGAGTCCCTCCATTTCTGGAAACTGAGAAGGCTCTCACCACCAGCGCCTTaGCCAGATGCTGGCCGGCCA +
Preference number: 4 (lower is better)
Translates to: TRPKWQLESLHFWKLRRLSPPAP*PDAGRP
Trigger: TGGCCGGCCAGCATCTGGCCAAGGCGCTGGTGGTGA...GAGCCTTCTCAGTTTCCAGAAATGGAGGGACTCAAGCTGCCACTTGGGCCTGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000373284.10
CDS-3UTR CCA 90 bp ACCAGGCCCAAGTGGCAGCTTGAGTCCCTCCATTTCTGGAAACTGAGAAGGCTCCGGCTTGGTGGGGGCTaGGTCCCGCACAAAGGCCTT +
Preference number: 4 (lower is better)
Translates to: TRPKWQLESLHFWKLRRLRLGGG*VPHKGL
Trigger: AAGGCCTTTGTGCGGGACCCAGCCCCCACCAAGCCG...GAGCCTTCTCAGTTTCCAGAAATGGAGGGACTCAAGCTGCCACTTGGGCCTGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000373284.10
CDS-3UTR CCA 90 bp AGGGCCCTTCCTGGCCATCTGTCCCGTGGCCTAGCCGACACTCCGTTCATCTCAGACTTCCATCAGGCCTaGGGGCATCTTGTCCATCTC +
Preference number: 4 (lower is better)
Translates to: RALPGHLSRGLADTPFISDFHQA*GHLVHL
Trigger: GAGATGGACAAGATGCCCCCAGGCCTGATGGAAGTC...TGAGATGAACGGAGTGTCGGCTAGGCCACGGGACAGATGGCCAGGAAGGGCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000373284.10
ENST00000463256.5
ENST00000463577.2
ENST00000496460.5
CDS-3UTR CCA 90 bp GCTGCGCCACGCCTCCAATGCCACCTGGTTGATCTGCTTGCCACCCGTGTTGCTGACTTCCATCAGGCCTaGGGGCATCTTGTCCATCTC +
Preference number: 4 (lower is better)
Translates to: AAPRLQCHLVDLLATRVADFHQA*GHLVHL
Trigger: GAGATGGACAAGATGCCCCCAGGCCTGATGGAAGTC...AGCAACACGGGTGGCAAGCAGATCAACCAGGTGGCATTGGAGGCGTGGCGCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373281.8
ENST00000463577.2
ENST00000493439.1
ENST00000496460.5
CDS-3UTR CCA 90 bp GAGGAAGAAGGCGATTCGGGAGGCCACGGTCTTGCAGCCGTTGGAGGAGAAGAGCTGTCCAGCACAGCCTaGACAACCTCATCCCTTGGC +
Preference number: 4 (lower is better)
Translates to: EEEGDSGGHGLAAVGGEELSSTA*TTSSLG
Trigger: GCCAAGGGATGAGGTTGTCCAGGCTGTGCTGGACAG...CTCTTCTCCTCCAACGGCTGCAAGACCGTGGCCTCCCGAATCGCCTTCTTCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000463256.5
ENST00000463577.2
ENST00000496460.5
CDS-3UTR CCA 90 bp GAGGAGAAGAGCTGCTCGTCTTCAGGGAAGAAGGTGGTGCTGTCCAGCACAGCCTGGCCATCTGTCCCGTaGCCTAGCCGACACTCCGTT +
Preference number: 4 (lower is better)
Translates to: EEKSCSSSGKKVVLSSTAWPSVP*PSRHSV
Trigger: AACGGAGTGTCGGCTAGGCCACGGGACAGATGGCCA...GGCTGTGCTGGACAGCACCACCTTCTTCCCTGAAGACGAGCAGCTCTTCTCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000463256.5
ENST00000463577.2
ENST00000496460.5
CDS-3UTR CCA 90 bp GAAGGCGATTCGGGAGGCCACGGTCTTGCAGCCGTTGGAGGAGAAGAGCTGCTCAAGCCCATGGGGAACTaGATTCTGCTGGGAGCACAG +
Preference number: 4 (lower is better)
Translates to: EGDSGGHGLAAVGGEELLKPMGN*ILLGAQ
Trigger: CTGTGCTCCCAGCAGAATCCAGTTCCCCATGGGCTT...GAGCAGCTCTTCTCCTCCAACGGCTGCAAGACCGTGGCCTCCCGAATCGCCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373281.8
ENST00000463577.2
CDS-3UTR CCA 90 bp GAAAAATGCTGGCCTCAGTTCCCTCAGCCGCCTTCTGGGTGTAGGACTCAGGGGGAACTGCCGGGTCAGTaGGCAAAGCATGAGACCCCG +
Preference number: 4 (lower is better)
Translates to: EKCWPQFPQPPSGCRTQGELPGQ*AKHETP
Trigger: CGGGGTCTCATGCTTTGCCCACTGACCCGGCAGTTC...CCCCTGAGTCCTACACCCAGAAGGCGGCTGAGGGAACTGAGGCCAGCATTTTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000373281.8
ENST00000463577.2
ENST00000493439.1
CDS-3UTR CCA 90 bp GGAGCCCAGGAAAGGCCGCAGGACTTCCATCAGGCCTGGGGGCATCTTGTCCATGAGTTTGAGAAGCCATaGTGCGGGTTGTCCAGCACC +
Preference number: 4 (lower is better)
Translates to: GAQERPQDFHQAWGHLVHEFEKP*CGLSST
Trigger: GGTGCTGGACAACCCGCACCATGGCTTCTCAAACTC...ATGGACAAGATGCCCCCAGGCCTGATGGAAGTCCTGCGGCCTTTCCTGGGCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000496460.5
CDS-3UTR TCA 90 bp CCCAAGTGGCAGCTTGAGTCCCTCCATTTCTGGAAACTGAGAAGGCTCCACCTGAGTGAGGTTCTGGGGTaGCCAGGGGTTTCCCTGGGG +
Preference number: 4 (lower is better)
Translates to: PKWQLESLHFWKLRRLHLSEVLG*PGVSLG
Trigger: CCCCAGGGAAACCCCTGGTCACCCCAGAACCTCACT...CAGGTGGAGCCTTCTCAGTTTCCAGAAATGGAGGGACTCAAGCTGCCACTTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000373284.10
ENST00000463577.2
CDS-3UTR TCA 90 bp GATGGCTTTGCGGTAATTGGTCCCGTATACCACCCAGGAGGAGCCCAGGAAAGGGAGGTCAAGGCTCAGTaGGGTTCTGGGGTGACCAGG +
Preference number: 4 (lower is better)
Translates to: DGFAVIGPVYHPGGAQEREVKAQ*GSGVTR
Trigger: CCTGGTCACCCCAGAACCTCACTGAGCCTTGACCTC...CCTTTCCTGGGCTCCTCCTGGGTGGTATACGGGACCAATTACCGCAAAGCCATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000463256.5
ENST00000463577.2
CDS-3UTR TCA 90 bp CAGTTTAGAGGCCAGGGCCCTTCCTGGCCATCTGTCCCGTGGCCTAGCCGACACTCCATTTCTGGAAACTaGGAAGGCTCCACCTGGCTT +
Preference number: 4 (lower is better)
Translates to: QFRGQGPSWPSVPWPSRHSISGN*EGSTWL
Trigger: AAGCCAGGTGGAGCCTTCTCAGTTTCCAGAAATGGA...GTGTCGGCTAGGCCACGGGACAGATGGCCAGGAAGGGCCCTGGCCTCTAAACTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000373284.10
ENST00000463577.2
CDS-3UTR TCA 90 bp AGACAGAGGCTCAGAGAGGCGGAGCCATGCTGCCTGAGGAAACACAGCGAGGATCGGAGCCATGCTGCCTaGGGAAACACAGCGAGGATT +
Preference number: 4 (lower is better)
Translates to: RQRLREAEPCCLRKHSEDRSHAA*GNTARI
Trigger: AATCCTCGCTGTGTTTCCTCAGGCAGCATGGCTCCG...ATCCTCGCTGTGTTTCCTCAGGCAGCATGGCTCCGCCTCTCTGAGCCTCTGTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373281.8
ENST00000463577.2
CDS-3UTR TCA 90 bp CCGCCGGCTGCGCCACGCCTCCAATGCCACCTGGTTGATCTGCTTGCCACCCGTTTTGTGTCCCTCAACTaGCTTTCCCTCACTGAACTT +
Preference number: 4 (lower is better)
Translates to: PPAAPRLQCHLVDLLATRFVSLN*LSLTEL
Trigger: AAGTTCAGTGAGGGAAAGTCAGTTGAGGGACACAAA...ACGGGTGGCAAGCAGATCAACCAGGTGGCATTGGAGGCGTGGCGCAGCCGGCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373281.8
ENST00000463577.2
CDS-3UTR TCA 90 bp CACCACTCAGAGAGTCAGAGGAAGAAGGCGATTCGGGAGGCCACGGTCTTGCAGCCAATGCCACCTGGTTaGTCTGCTTGCCACCCGTGT +
Preference number: 4 (lower is better)
Translates to: HHSESQRKKAIREATVLQPMPPG*SACHPC
Trigger: ACACGGGTGGCAAGCAGATCAACCAGGTGGCATTGG...CTGCAAGACCGTGGCCTCCCGAATCGCCTTCTTCCTCTGACTCTCTGAGTGGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373281.8
ENST00000463577.2
ENST00000496460.5
CDS-3UTR TCA 90 bp AGGGAAGAAGGTGGTGCTGTCCAGCACAGCCTGGACAACCTCATCCCTTGGCTCCCAATGCCACCTGGTTaGTCTGCTTGCCACCCGTGT +
Preference number: 4 (lower is better)
Translates to: REEGGAVQHSLDNLIPWLPMPPG*SACHPC
Trigger: ACACGGGTGGCAAGCAGATCAACCAGGTGGCATTGG...GAGCCAAGGGATGAGGTTGTCCAGGCTGTGCTGGACAGCACCACCTTCTTCCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373281.8
ENST00000463577.2
ENST00000496460.5
CDS-3UTR TCA 90 bp ACCAGGCCCAAGTGGCAGCTTGAGTCCCTCCATTTCTGGAAACTGAGAAGGCTCTCAGTGGGCAAAGCATaGGACCCCGGGAGAGCCTGG +
Preference number: 4 (lower is better)
Translates to: TRPKWQLESLHFWKLRRLSVGKA*DPGRAW
Trigger: CCAGGCTCTCCCGGGGTCTCATGCTTTGCCCACTGA...GAGCCTTCTCAGTTTCCAGAAATGGAGGGACTCAAGCTGCCACTTGGGCCTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373281.8
ENST00000463577.2
CDS-3UTR TCA 90 bp ACCACTGCGTCTAGGAGGCGCTCTTCCATGATGCCCGAGTTTGAGAAGCCATCTTCAGTGGGCAAAGCATaGGACCCCGGGAGAGCCTGG +
Preference number: 4 (lower is better)
Translates to: TTASRRRSSMMPEFEKPSSVGKA*DPGRAW
Trigger: CCAGGCTCTCCCGGGGTCTCATGCTTTGCCCACTGA...AGATGGCTTCTCAAACTCGGGCATCATGGAAGAGCGCCTCCTAGACGCAGTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373281.8
ENST00000463577.2
ENST00000493439.1
CDS-3UTR GCA 90 bp ACCAGGCCCAAGTGGCAGCTTGAGTCCCTCCATTTCTGGAAACTGAGAAGGCTCCATAGGATTTGCCGGTaGCGGTCCAGCCGTGCAGGG +
Preference number: 4 (lower is better)
Translates to: TRPKWQLESLHFWKLRRLHRICR*RSSRAG
Trigger: CCCTGCACGGCTGGACCGGCACCGGCAAATCCTATG...GAGCCTTCTCAGTTTCCAGAAATGGAGGGACTCAAGCTGCCACTTGGGCCTGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000373284.10
CDS-3UTR GCA 90 bp TCTAGGAGGCGCTCTTCCATGATGCCCGAGTTTGAGAAGCCATCTGCAGGAAGGCATAGGATTTGCCGGTaGCGGTCCAGCCGTGCAGGG +
Preference number: 4 (lower is better)
Translates to: SRRRSSMMPEFEKPSAGRHRICR*RSSRAG
Trigger: CCCTGCACGGCTGGACCGGCACCGGCAAATCCTATG...CCTTCCTGCAGATGGCTTCTCAAACTCGGGCATCATGGAAGAGCGCCTCCTAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373281.8
CDS-3UTR GCA 90 bp AAGTGGCAGCTTGAGTCCCTCCATTTCTGGAAACTGAGAAGGCTCCACCTGGCTACGGGAGAAAAGTGGTaGACGCGGGGGCTGCGGAGG +
Preference number: 4 (lower is better)
Translates to: KWQLESLHFWKLRRLHLATGEKW*TRGLRR
Trigger: CCTCCGCAGCCCCCGCGTGCACCACTTTTCTCCCGT...AGCCAGGTGGAGCCTTCTCAGTTTCCAGAAATGGAGGGACTCAAGCTGCCACTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000373284.10
CDS-3UTR GCA 90 bp AAGGTGGCCGGGGCCAAGATGCTCTCGAGCCAGTTTAGAGGCCAGGGCCCTTCCTTGGAGGAGAAGAGCTaGTCGTCTTCAGGGAAGAAG +
Preference number: 4 (lower is better)
Translates to: KVAGAKMLSSQFRGQGPSLEEKS*SSSGKK
Trigger: CTTCTTCCCTGAAGACGAGCAGCTCTTCTCCTCCAA...GGAAGGGCCCTGGCCTCTAAACTGGCTCGAGAGCATCTTGGCCCCGGCCACCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000373284.10
ENST00000463256.5
ENST00000463577.2
ENST00000496460.5
CDS-3UTR GCA 90 bp CTTCCTGGCCATCTGTCCCGTGGCCTAGCCGACACTCCGTTCATCTCACTTGGTTGGCCGGGGCCAAGATaGTCTCGAGCCAGTTTAGAG +
Preference number: 4 (lower is better)
Translates to: LPGHLSRGLADTPFISLGWPGPR*SRASLE
Trigger: CTCTAAACTGGCTCGAGAGCATCTTGGCCCCGGCCA...ACCAAGTGAGATGAACGGAGTGTCGGCTAGGCCACGGGACAGATGGCCAGGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000373284.10
ENST00000463256.5
ENST00000463577.2
ENST00000496460.5
CDS-3UTR GCA 90 bp CCCAAGTGGCAGCTTGAGTCCCTCCATTTCTGGAAACTGAGAAGGCTCCACCTGGGGGAGGAGGTATGGTaGCCGACCAAGGAGGCAAGG +
Preference number: 4 (lower is better)
Translates to: PKWQLESLHFWKLRRLHLGEEVW*PTKEAR
Trigger: CCTTGCCTCCTTGGTCGGGCACCATACCTCCTCCCC...CAGGTGGAGCCTTCTCAGTTTCCAGAAATGGAGGGACTCAAGCTGCCACTTGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000373284.10
ENST00000463577.2
CDS-3UTR GCA 90 bp GTCAGAGGAAGAAGGCGATTCGGGAGGCCACGGTCTTGCAGCCGTTGGAGGAGATGGGGAACTGGATTCTaGTGGGAGCACAGGCTAAGG +
Preference number: 4 (lower is better)
Translates to: VRGRRRFGRPRSCSRWRRWGTGF*WEHRLR
Trigger: CCTTAGCCTGTGCTCCCAGCAGAATCCAGTTCCCCA...TCTCCTCCAACGGCTGCAAGACCGTGGCCTCCCGAATCGCCTTCTTCCTCTGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373281.8
ENST00000463577.2
CDS-3UTR GCA 90 bp AGGAAAAATGCTGGCCTCAGTTCCCTCAGCCGCCTTCTGGGTGTAGGACTCAGGGAGGCGGAGCCATGCTaGCTGAGGAAACACAGCGAG +
Preference number: 4 (lower is better)
Translates to: RKNAGLSSLSRLLGVGLREAEPC*LRKHSE
Trigger: CTCGCTGTGTTTCCTCAGGCAGCATGGCTCCGCCTC...CCTGAGTCCTACACCCAGAAGGCGGCTGAGGGAACTGAGGCCAGCATTTTTCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373281.8
ENST00000463577.2
CDS-3UTR GCA 90 bp CACCACTCAGAGAGTCAGAGGAAGAAGGCGATTCGGGAGGCCACGGTCTTGCAGGCGCCACGCCTCCAATaGCACCTGGTTGATCTGCTT +
Preference number: 4 (lower is better)
Translates to: HHSESQRKKAIREATVLQAPRLQ*HLVDLL
Trigger: AAGCAGATCAACCAGGTGGCATTGGAGGCGTGGCGC...CTGCAAGACCGTGGCCTCCCGAATCGCCTTCTTCCTCTGACTCTCTGAGTGGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373281.8
ENST00000463577.2
ENST00000496460.5
CDS-3UTR GCA 90 bp CTTGGTGCTCTGGGTTCCTGTGACAGAGGCCCCTGGCCTTTCCTGCATGGCCTGTCACAAAGCTGGGAGTaGCAAAGCCAGGCTCAGAAC +
Preference number: 4 (lower is better)
Translates to: LGALGSCDRGPWPFLHGLSQSWE*QSQAQN
Trigger: GTTCTGAGCCTGGCTTTGGCACTCCCAGCTTTGTGA...CAGGCCATGCAGGAAAGGCCAGGGGCCTCTGTCACAGGAACCCAGAGCACCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373281.8
ENST00000463577.2
CDS-3UTR CCA 90 bp CCTGGCCATCTGTCCCGTGGCCTAGCCGACACTCCGTTCATCTCACTTGGTGCTGCAGTGAGGTTCCCTTaGACCCAGCTCTTCAGATCC +
Preference number: 4 (lower is better)
Translates to: PGHLSRGLADTPFISLGAAVRFP*TQLFRS
Trigger: GGATCTGAAGAGCTGGGTCCAAGGGAACCTCACTGC...AGCACCAAGTGAGATGAACGGAGTGTCGGCTAGGCCACGGGACAGATGGCCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000373284.10
ENST00000463256.5
ENST00000463577.2
ENST00000496460.5
CDS-3UTR CCA 90 bp AGGAAGAAGGCGATTCGGGAGGCCACGGTCTTGCAGCCGTTGGAGGAGAAGAGCGCAGTGAGGTTCCCTTaGACCCAGCTCTTCAGATCC +
Preference number: 4 (lower is better)
Translates to: RKKAIREATVLQPLEEKSAVRFP*TQLFRS
Trigger: GGATCTGAAGAGCTGGGTCCAAGGGAACCTCACTGC...GCTCTTCTCCTCCAACGGCTGCAAGACCGTGGCCTCCCGAATCGCCTTCTTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000463256.5
ENST00000463577.2
ENST00000496460.5
CDS-3UTR CCA 90 bp GAGGAAGAAGGCGATTCGGGAGGCCACGGTCTTGCAGCCGTTGGAGGAGAAGAGGCAGTGAGGTTCCCTTaGACCCAGCTCTTCAGATCC +
Preference number: 4 (lower is better)
Translates to: EEEGDSGGHGLAAVGGEEAVRFP*TQLFRS
Trigger: GGATCTGAAGAGCTGGGTCCAAGGGAACCTCACTGC...CTCTTCTCCTCCAACGGCTGCAAGACCGTGGCCTCCCGAATCGCCTTCTTCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000463256.5
ENST00000463577.2
ENST00000496460.5
CDS-3UTR CCA 90 bp GTCAGAGGAAGAAGGCGATTCGGGAGGCCACGGTCTTGCAGCCGTTGGAGGAGAGACTTCCATCAGGCCTaGGGGCATCTTGTCCATCTC +
Preference number: 4 (lower is better)
Translates to: VRGRRRFGRPRSCSRWRRDFHQA*GHLVHL
Trigger: GAGATGGACAAGATGCCCCCAGGCCTGATGGAAGTC...TCTCCTCCAACGGCTGCAAGACCGTGGCCTCCCGAATCGCCTTCTTCCTCTGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000463256.5
ENST00000463577.2
ENST00000496460.5
CDS-3UTR CCA 90 bp GGGTTTCCCTGGGGAAGGTGGCCGGGGCCAAGATGCTCTCGAGCCAGTTTAGAGTGGCTTTGCGGTAATTaGTCCCGTATACCACCCAGG +
Preference number: 4 (lower is better)
Translates to: GFPWGRWPGPRCSRASLEWLCGN*SRIPPR
Trigger: CCTGGGTGGTATACGGGACCAATTACCGCAAAGCCA...CTCTAAACTGGCTCGAGAGCATCTTGGCCCCGGCCACCTTCCCCAGGGAAACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000373284.10
ENST00000463256.5
ENST00000463577.2
CDS-3UTR CCA 90 bp CCATTTCTGGAAACTGAGAAGGCTCCACCTGGCTTGATATGGACACAGGGTGTGGGCTCCAGGCCCAGCTaGGCCAGCTCGTTGAGCACG +
Preference number: 4 (lower is better)
Translates to: PFLETEKAPPGLIWTQGVGSRPS*ASSLST
Trigger: CGTGCTCAACGAGCTGGCCCAGCTGGGCCTGGAGCC...CACACCCTGTGTCCATATCAAGCCAGGTGGAGCCTTCTCAGTTTCCAGAAATGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000373284.10
ENST00000463577.2
CDS-3UTR CCA 90 bp CTTCCTGGCCATCTGTCCCGTGGCCTAGCCGACACTCCGTTCATCTCACTTGGTCTGTCCAGCACAGCCTaGACAACCTCATCCCTTGGC +
Preference number: 4 (lower is better)
Translates to: LPGHLSRGLADTPFISLGLSSTA*TTSSLG
Trigger: GCCAAGGGATGAGGTTGTCCAGGCTGTGCTGGACAG...ACCAAGTGAGATGAACGGAGTGTCGGCTAGGCCACGGGACAGATGGCCAGGAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000373284.10
ENST00000463256.5
ENST00000463577.2
ENST00000496460.5
CDS-3UTR CCA 90 bp GAAAAATGCTGGCCTCAGTTCCCTCAGCCGCCTTCTGGGTGTAGGACTCAGGGGCTGTCCAGCACAGCCTaGACAACCTCATCCCTTGGC +
Preference number: 4 (lower is better)
Translates to: EKCWPQFPQPPSGCRTQGLSSTA*TTSSLG
Trigger: GCCAAGGGATGAGGTTGTCCAGGCTGTGCTGGACAG...CCCCTGAGTCCTACACCCAGAAGGCGGCTGAGGGAACTGAGGCCAGCATTTTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373281.8
ENST00000463577.2
CDS-3UTR CCA 90 bp GGTGGCAGACTGAGGAGGGAGCACCGCCACGAGCCACAGTCCCTGAGTTATAATCTGTCCAGCACAGCCTaGACAACCTCATCCCTTGGC +
Preference number: 4 (lower is better)
Translates to: GGRLRREHRHEPQSLSYNLSSTA*TTSSLG
Trigger: GCCAAGGGATGAGGTTGTCCAGGCTGTGCTGGACAG...ATTATAACTCAGGGACTGTGGCTCGTGGCGGTGCTCCCTCCTCAGTCTGCCACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000373284.10
ENST00000463577.2
CDS-3UTR CCA 90 bp CCTTCCTGGCCATCTGTCCCGTGGCCTAGCCGACACTCCGTTCATCTCACTTGGCTTCAGGGAAGAAGGTaGTGCTGTCCAGCACAGCCT +
Preference number: 4 (lower is better)
Translates to: PSWPSVPWPSRHSVHLTWLQGRR*CCPAQP
Trigger: AGGCTGTGCTGGACAGCACCACCTTCTTCCCTGAAG...CCAAGTGAGATGAACGGAGTGTCGGCTAGGCCACGGGACAGATGGCCAGGAAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000373284.10
ENST00000463256.5
ENST00000463577.2
ENST00000496460.5
CDS-3UTR CCA 90 bp GCCCTTCCTGGCCATCTGTCCCGTGGCCTAGCCGACACTCCGTTCATCTCACTTCTTCAGGGAAGAAGGTaGTGCTGTCCAGCACAGCCT +
Preference number: 4 (lower is better)
Translates to: ALPGHLSRGLADTPFISLLQGRR*CCPAQP
Trigger: AGGCTGTGCTGGACAGCACCACCTTCTTCCCTGAAG...AAGTGAGATGAACGGAGTGTCGGCTAGGCCACGGGACAGATGGCCAGGAAGGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000373284.10
ENST00000463256.5
ENST00000463577.2
ENST00000496460.5
CDS-3UTR CCA 90 bp GAGGAGAAGAGCTGCTCGTCTTCAGGGAAGAAGGTGGTGCTGTCCAGCACAGCCCGGTCTTGCAGCCGTTaGAGGAGAAGAGCTGCTCGT +
Preference number: 4 (lower is better)
Translates to: EEKSCSSSGKKVVLSSTARSCSR*RRRAAR
Trigger: ACGAGCAGCTCTTCTCCTCCAACGGCTGCAAGACCG...GGCTGTGCTGGACAGCACCACCTTCTTCCCTGAAGACGAGCAGCTCTTCTCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000463256.5
ENST00000463577.2
ENST00000496460.5
CDS-3UTR CCA 90 bp CCCAAGTGGCAGCTTGAGTCCCTCCATTTCTGGAAACTGAGAAGGCTCCACCTGGGAGGGGAGGAGGTATaGTGCCCGACCAAGGAGGCA +
Preference number: 4 (lower is better)
Translates to: PKWQLESLHFWKLRRLHLGGEEV*CPTKEA
Trigger: TGCCTCCTTGGTCGGGCACCATACCTCCTCCCCTCC...CAGGTGGAGCCTTCTCAGTTTCCAGAAATGGAGGGACTCAAGCTGCCACTTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000373284.10
ENST00000463577.2
CDS-3UTR CCA 90 bp TCAGAGAGTCAGAGGAAGAAGGCGATTCGGGAGGCCACGGTCTTGCAGCCGTTGCCACCTGGCTTGATATaGACACAGGGTGTGGGGTGG +
Preference number: 4 (lower is better)
Translates to: SESQRKKAIREATVLQPLPPGLI*TQGVGW
Trigger: CCACCCCACACCCTGTGTCCATATCAAGCCAGGTGG...CAACGGCTGCAAGACCGTGGCCTCCCGAATCGCCTTCTTCCTCTGACTCTCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000463577.2
CDS-3UTR CCA 90 bp GGGCAGGATTGGACCCTCGCTTCCCCGCTGCCACCTGACATAGGAACATGGCTCAAAACCAGGCCCAAGTaGCAGCTTGAGTCCCTCCAT +
Preference number: 4 (lower is better)
Translates to: GQDWTLASPLPPDIGTWLKTRPK*QLESLH
Trigger: ATGGAGGGACTCAAGCTGCCACTTGGGCCTGGTTTT...GAGCCATGTTCCTATGTCAGGTGGCAGCGGGGAAGCGAGGGTCCAATCCTGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373281.8
ENST00000463577.2
CDS-3UTR CCA 90 bp GAGGAAGAAGGCGATTCGGGAGGCCACGGTCTTGCAGCCGTTGGAGGAGAAGAGAAGCCCATGGGGAACTaGATTCTGCTGGGAGCACAG +
Preference number: 4 (lower is better)
Translates to: EEEGDSGGHGLAAVGGEEKPMGN*ILLGAQ
Trigger: CTGTGCTCCCAGCAGAATCCAGTTCCCCATGGGCTT...CTCTTCTCCTCCAACGGCTGCAAGACCGTGGCCTCCCGAATCGCCTTCTTCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373281.8
ENST00000463577.2
CDS-3UTR CCA 90 bp GAGCTGCTCGTCTTCAGGGAAGAAGGTGGTGCTGTCCAGCACAGCCTGGACAACGCCCAGCTAAGCCCATaGGGAACTGGATTCTGCTGG +
Preference number: 4 (lower is better)
Translates to: ELLVFREEGGAVQHSLDNAQLSP*GTGFCW
Trigger: CCAGCAGAATCCAGTTCCCCATGGGCTTAGCTGGGC...GTTGTCCAGGCTGTGCTGGACAGCACCACCTTCTTCCCTGAAGACGAGCAGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373281.8
ENST00000463577.2
CDS-3UTR CCA 90 bp TCTCACTTGGTGCTCTGGGTTCCTGTGACAGAGGCCCCTGGCCTTTCCTGCATGGCCTCCAATGCCACCTaGTTGATCTGCTTGCCACCC +
Preference number: 4 (lower is better)
Translates to: SHLVLWVPVTEAPGLSCMASNAT*LICLPP
Trigger: GGGTGGCAAGCAGATCAACCAGGTGGCATTGGAGGC...CATGCAGGAAAGGCCAGGGGCCTCTGTCACAGGAACCCAGAGCACCAAGTGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373281.8
ENST00000373284.10
ENST00000463577.2
ENST00000496460.5
CDS-3UTR TCA 90 bp ATCTCACTTGGTGCTCTGGGTTCCTGTGACAGAGGCCCCTGGCCTTTCCTGCATGGAGGCGCTCTTCCATaGTGCCCGAGTTTGAGAAGC +
Preference number: 4 (lower is better)
Translates to: ISLGALGSCDRGPWPFLHGGALP*CPSLRS
Trigger: GCTTCTCAAACTCGGGCATCATGGAAGAGCGCCTCC...ATGCAGGAAAGGCCAGGGGCCTCTGTCACAGGAACCCAGAGCACCAAGTGAGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000373284.10
ENST00000463256.5
ENST00000463577.2
ENST00000496460.5
CDS-3UTR TCA 90 bp CTGGGTGTAGGACTCAGGGGCTGTAAGGCTCACCCAAAGTCACAAAGCTGGGAGGGAGGCGCTCTTCCATaGTGCCCGAGTTTGAGAAGC +
Preference number: 4 (lower is better)
Translates to: LGVGLRGCKAHPKSQSWEGGALP*CPSLRS
Trigger: GCTTCTCAAACTCGGGCATCATGGAAGAGCGCCTCC...CTCCCAGCTTTGTGACTTTGGGTGAGCCTTACAGCCCCTGAGTCCTACACCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373281.8
ENST00000463577.2
ENST00000493439.1
CDS-3UTR TCA 90 bp CCCTGGGGAAGGTGGCCGGGGCCAAGATGCTCTCGAGCCAGTTTAGAGGCCAGGACGAGCCACAGTCCCTaGGTTATAATTCACAGTAAG +
Preference number: 4 (lower is better)
Translates to: PWGRWPGPRCSRASLEARTSHSP*VIIHSK
Trigger: CTTACTGTGAATTATAACTCAGGGACTGTGGCTCGT...CCTGGCCTCTAAACTGGCTCGAGAGCATCTTGGCCCCGGCCACCTTCCCCAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000373284.10
ENST00000463577.2
CDS-3UTR TCA 90 bp AGAGAGTCAGAGGAAGAAGGCGATTCGGGAGGCCACGGTCTTGCAGCCGTTGGAGCCCAAGTGGCAGCTTaGGTCCCTCCATTTCTGGAA +
Preference number: 4 (lower is better)
Translates to: RESEEEGDSGGHGLAAVGAQVAA*VPPFLE
Trigger: TTCCAGAAATGGAGGGACTCAAGCTGCCACTTGGGC...TCCAACGGCTGCAAGACCGTGGCCTCCCGAATCGCCTTCTTCCTCTGACTCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000463577.2
CDS-3UTR TCA 90 bp AAGAAGGTGGTGCTGTCCAGCACAGCCTGGACAACCTCATCCCTTGGCTCCAGGGCCCAAGTGGCAGCTTaGGTCCCTCCATTTCTGGAA +
Preference number: 4 (lower is better)
Translates to: KKVVLSSTAWTTSSLGSRAQVAA*VPPFLE
Trigger: TTCCAGAAATGGAGGGACTCAAGCTGCCACTTGGGC...CCTGGAGCCAAGGGATGAGGTTGTCCAGGCTGTGCTGGACAGCACCACCTTCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373281.8
ENST00000463577.2
CDS-3UTR TCA 90 bp GGGAAGGTGGCCGGGGCCAAGATGCTCTCGAGCCAGTTTAGAGGCCAGGGCCCTGAGCCCAGAATTTGCTaGGAATGTCCAAAGGGAAAT +
Preference number: 4 (lower is better)
Translates to: GKVAGAKMLSSQFRGQGPEPRIC*ECPKGN
Trigger: ATTTCCCTTTGGACATTCTCAGCAAATTCTGGGCTC...AGGGCCCTGGCCTCTAAACTGGCTCGAGAGCATCTTGGCCCCGGCCACCTTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373281.8
ENST00000463577.2
CDS-3UTR TCA 90 bp ATCTCACTTGGTGCTCTGGGTTCCTGTGACAGAGGCCCCTGGCCTTTCCTGCATAGGAGCCAACTCCACTaGAAACGCTCCACTTCCCCC +
Preference number: 4 (lower is better)
Translates to: ISLGALGSCDRGPWPFLHRSQLH*KRSTSP
Trigger: GGGGGAAGTGGAGCGTTTTCAGTGGAGTTGGCTCCT...ATGCAGGAAAGGCCAGGGGCCTCTGTCACAGGAACCCAGAGCACCAAGTGAGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373281.8
ENST00000463577.2
CDS-3UTR TCA 90 bp CGCCACGCCTCCAATGCCACCTGGTTGATCTGCTTGCCACCCGTGTTGCTGATGCATGATGCCCGAGTTTaGGAAGCCATCTGCAGGAAG +
Preference number: 4 (lower is better)
Translates to: RHASNATWLICLPPVLLMHDARV*EAICRK
Trigger: CTTCCTGCAGATGGCTTCTCAAACTCGGGCATCATG...CATCAGCAACACGGGTGGCAAGCAGATCAACCAGGTGGCATTGGAGGCGTGGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493439.1
CDS-3UTR TCA 90 bp TCAGAGGAAGAAGGCGATTCGGGAGGCCACGGTCTTGCAGCCGTTGGAGGAGAACATGATGCCCGAGTTTaGGAAGCCATGGTGCGGGTT +
Preference number: 4 (lower is better)
Translates to: SEEEGDSGGHGLAAVGGEHDARV*EAMVRV
Trigger: AACCCGCACCATGGCTTCTCAAACTCGGGCATCATG...TTCTCCTCCAACGGCTGCAAGACCGTGGCCTCCCGAATCGCCTTCTTCCTCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496460.5
CDS-3UTR GCA 90 bp ACCAGGCCCAAGTGGCAGCTTGAGTCCCTCCATTTCTGGAAACTGAGAAGGCTCGGGAGGCCACGGTCTTaGAGCCGTTGGAGGAGAAGA +
Preference number: 4 (lower is better)
Translates to: TRPKWQLESLHFWKLRRLGRPRS*SRWRRR
Trigger: TCTTCTCCTCCAACGGCTGCAAGACCGTGGCCTCCC...GAGCCTTCTCAGTTTCCAGAAATGGAGGGACTCAAGCTGCCACTTGGGCCTGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000373284.10
ENST00000463577.2
CDS-3UTR GCA 90 bp GATGGCTTTGCGGTAATTGGTCCCGTATACCACCCAGGAGGAGCCCAGGAAAGGTGGCCGGGGCCAAGATaGTCTCGAGCCAGTTTAGAG +
Preference number: 4 (lower is better)
Translates to: DGFAVIGPVYHPGGAQERWPGPR*SRASLE
Trigger: CTCTAAACTGGCTCGAGAGCATCTTGGCCCCGGCCA...CCTTTCCTGGGCTCCTCCTGGGTGGTATACGGGACCAATTACCGCAAAGCCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000463256.5
ENST00000463577.2
ENST00000496460.5
CDS-3UTR GCA 90 bp AGCTGCTCGTCTTCAGGGAAGAAGGTGGTGCTGTCCAGCACAGCCTGGACAACCGCCACCTGGTTGATCTaGTTGCCACCCGTGTTGCTA +
Preference number: 4 (lower is better)
Translates to: SCSSSGKKVVLSSTAWTTATWLI*LPPVLL
Trigger: TAGCAACACGGGTGGCAAGCAGATCAACCAGGTGGC...GGTTGTCCAGGCTGTGCTGGACAGCACCACCTTCTTCCCTGAAGACGAGCAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373281.8
ENST00000463577.2
CDS-3UTR CCA 90 bp TCTCACTTGGTGCTCTGGGTTCCTGTGACAGAGGCCCCTGGCCTTTCCTGCATGGCAGTGAGGTTCCCTTaGACCCAGCTCTTCAGATCC +
Preference number: 4 (lower is better)
Translates to: SHLVLWVPVTEAPGLSCMAVRFP*TQLFRS
Trigger: GGATCTGAAGAGCTGGGTCCAAGGGAACCTCACTGC...CATGCAGGAAAGGCCAGGGGCCTCTGTCACAGGAACCCAGAGCACCAAGTGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000373284.10
ENST00000463256.5
ENST00000463577.2
ENST00000496460.5
CDS-3UTR CCA 90 bp CACCACTCAGAGAGTCAGAGGAAGAAGGCGATTCGGGAGGCCACGGTCTTGCAGGACTTCCATCAGGCCTaGGGGCATCTTGTCCATCTC +
Preference number: 4 (lower is better)
Translates to: HHSESQRKKAIREATVLQDFHQA*GHLVHL
Trigger: GAGATGGACAAGATGCCCCCAGGCCTGATGGAAGTC...CTGCAAGACCGTGGCCTCCCGAATCGCCTTCTTCCTCTGACTCTCTGAGTGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000463256.5
ENST00000463577.2
ENST00000496460.5
CDS-3UTR CCA 90 bp GATGAAGATGAAGATGGCTTTGCGGTAATTGGTCCCGTATACCACCCAGGAGGAGGCTCCAGGCCCAGCTaGGCCAGCTCGTTGAGCACG +
Preference number: 4 (lower is better)
Translates to: DEDEDGFAVIGPVYHPGGGSRPS*ASSLST
Trigger: CGTGCTCAACGAGCTGGCCCAGCTGGGCCTGGAGCC...TCCTCCTGGGTGGTATACGGGACCAATTACCGCAAAGCCATCTTCATCTTCATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000463256.5
ENST00000463577.2
ENST00000496460.5
CDS-3UTR CCA 90 bp GACACCACTCAGAGAGTCAGAGGAAGAAGGCGATTCGGGAGGCCACGGTCTTGCCTTCAGGGAAGAAGGTaGTGCTGTCCAGCACAGCCT +
Preference number: 4 (lower is better)
Translates to: DTTQRVRGRRRFGRPRSCLQGRR*CCPAQP
Trigger: AGGCTGTGCTGGACAGCACCACCTTCTTCCCTGAAG...GCAAGACCGTGGCCTCCCGAATCGCCTTCTTCCTCTGACTCTCTGAGTGGTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000463256.5
ENST00000463577.2
ENST00000496460.5
CDS-3UTR CCA 90 bp CTCAGAGAGTCAGAGGAAGAAGGCGATTCGGGAGGCCACGGTCTTGCAGCCGTTTCTCACTTGGTGCTCTaGGTTCCTGTGACAGAGGCC +
Preference number: 4 (lower is better)
Translates to: LRESEEEGDSGGHGLAAVSHLVL*VPVTEA
Trigger: GGCCTCTGTCACAGGAACCCAGAGCACCAAGTGAGA...AACGGCTGCAAGACCGTGGCCTCCCGAATCGCCTTCTTCCTCTGACTCTCTGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000463256.5
ENST00000463577.2
ENST00000496460.5
CDS-3UTR CCA 90 bp ACCACTGCGTCTAGGAGGCGCTCTTCCATGATGCCCGAGTTTGAGAAGCCATCTTTTCCCTGGGGAAGGTaGCCGGGGCCAAGATGCTCT +
Preference number: 4 (lower is better)
Translates to: TTASRRRSSMMPEFEKPSFPWGR*PGPRCS
Trigger: AGAGCATCTTGGCCCCGGCCACCTTCCCCAGGGAAA...AGATGGCTTCTCAAACTCGGGCATCATGGAAGAGCGCCTCCTAGACGCAGTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373281.8
ENST00000463256.5
ENST00000463577.2
CDS-3UTR CCA 90 bp CTGGGTGTAGGACTCAGGGGCTGTAAGGCTCACCCAAAGTCACAAAGCTGGGAGCCACCTGGCTTGATATaGACACAGGGTGTGGGGTGG +
Preference number: 4 (lower is better)
Translates to: LGVGLRGCKAHPKSQSWEPPGLI*TQGVGW
Trigger: CCACCCCACACCCTGTGTCCATATCAAGCCAGGTGG...CTCCCAGCTTTGTGACTTTGGGTGAGCCTTACAGCCCCTGAGTCCTACACCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373281.8
ENST00000463577.2
CDS-3UTR CCA 90 bp GGGTTTCCCTGGGGAAGGTGGCCGGGGCCAAGATGCTCTCGAGCCAGTTTAGAGGAGTCCCTCCATTTCTaGAAACTGAGAAGGCTCCAC +
Preference number: 4 (lower is better)
Translates to: GFPWGRWPGPRCSRASLEESLHF*KLRRLH
Trigger: GTGGAGCCTTCTCAGTTTCCAGAAATGGAGGGACTC...CTCTAAACTGGCTCGAGAGCATCTTGGCCCCGGCCACCTTCCCCAGGGAAACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000373284.10
ENST00000463577.2
CDS-3UTR CCA 90 bp GATTCGGGAGGCCACGGTCTTGCAGCCGTTGGAGGAGAAGAGCTGCTCGTCTTCAAAACCAGGCCCAAGTaGCAGCTTGAGTCCCTCCAT +
Preference number: 4 (lower is better)
Translates to: DSGGHGLAAVGGEELLVFKTRPK*QLESLH
Trigger: ATGGAGGGACTCAAGCTGCCACTTGGGCCTGGTTTT...GAAGACGAGCAGCTCTTCTCCTCCAACGGCTGCAAGACCGTGGCCTCCCGAATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000463577.2
CDS-3UTR CCA 90 bp GAAGCCATCTGCAGGAAGGGTAGGTGGGGAGGGGACTTTGTGCTTCACAAGAGGGCCCAGCTAAGCCCATaGGGAACTGGATTCTGCTGG +
Preference number: 4 (lower is better)
Translates to: EAICRKGRWGGDFVLHKRAQLSP*GTGFCW
Trigger: CCAGCAGAATCCAGTTCCCCATGGGCTTAGCTGGGC...CCTCTTGTGAAGCACAAAGTCCCCTCCCCACCTACCCTTCCTGCAGATGGCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373281.8
ENST00000463577.2
CDS-3UTR CCA 90 bp CGATTCGGGAGGCCACGGTCTTGCAGCCGTTGGAGGAGAAGAGCTGCTCGTCTTCCAAAGTCACAAAGCTaGGAGTGCCAAAGCCAGGCT +
Preference number: 4 (lower is better)
Translates to: RFGRPRSCSRWRRRAARLPKSQS*ECQSQA
Trigger: AGCCTGGCTTTGGCACTCCCAGCTTTGTGACTTTGG...AAGACGAGCAGCTCTTCTCCTCCAACGGCTGCAAGACCGTGGCCTCCCGAATCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373281.8
ENST00000463577.2
CDS-3UTR CCA 90 bp GGTGGCAGACTGAGGAGGGAGCACCGCCACGAGCCACAGTCCCTGAGTTATAATCAGGAGGAAAAATGCTaGCCTCAGTTCCCTCAGCCG +
Preference number: 4 (lower is better)
Translates to: GGRLRREHRHEPQSLSYNQEEKC*PQFPQP
Trigger: CGGCTGAGGGAACTGAGGCCAGCATTTTTCCTCCTG...ATTATAACTCAGGGACTGTGGCTCGTGGCGGTGCTCCCTCCTCAGTCTGCCACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373281.8
ENST00000463577.2
CDS-3UTR CCA 90 bp TCTCACTTGGTGCTCTGGGTTCCTGTGACAGAGGCCCCTGGCCTTTCCTGCATGTGCAGGAAGGGTAGGTaGGGAGGGGACTTTGTGCTT +
Preference number: 4 (lower is better)
Translates to: SHLVLWVPVTEAPGLSCMCRKGR*GGDFVL
Trigger: AAGCACAAAGTCCCCTCCCCACCTACCCTTCCTGCA...CATGCAGGAAAGGCCAGGGGCCTCTGTCACAGGAACCCAGAGCACCAAGTGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373281.8
ENST00000463577.2
CDS-3UTR CCA 90 bp AGAGGAAGAAGGCGATTCGGGAGGCCACGGTCTTGCAGCCGTTGGAGGAGAAGATGCAGGAAGGGTAGGTaGGGAGGGGACTTTGTGCTT +
Preference number: 4 (lower is better)
Translates to: RGRRRFGRPRSCSRWRRRCRKGR*GGDFVL
Trigger: AAGCACAAAGTCCCCTCCCCACCTACCCTTCCTGCA...TCTTCTCCTCCAACGGCTGCAAGACCGTGGCCTCCCGAATCGCCTTCTTCCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373281.8
ENST00000463577.2
3UTR CAA 72 bp AAGAAGGCGATTCGGGAGGCCACGGTCTTGCAGCCGTaGGAGGAGAAGAGCTGCTCGTCTTCAGGGAAGAAG +
Preference number: 4 (lower is better)
Translates to: KKAIREATVLQP*EEKSCSSSGKK
Trigger: CTTCTTCCCTGAAGACGAGCAGCTCTTCTCCTCCAACGGCTGCAAGACCGTGGCCTCCCGAATCGCCTTCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000463256.5
ENST00000463577.2
ENST00000496460.5
CDS-3UTR TCA 90 bp GGAAGAAGGCGATTCGGGAGGCCACGGTCTTGCAGCCGTTGGAGGAGAAGAGCTTCCATTTCTGGAAACTaGGAAGGCTCCACCTGGCTT +
Preference number: 4 (lower is better)
Translates to: GRRRFGRPRSCSRWRRRASISGN*EGSTWL
Trigger: AAGCCAGGTGGAGCCTTCTCAGTTTCCAGAAATGGA...AGCTCTTCTCCTCCAACGGCTGCAAGACCGTGGCCTCCCGAATCGCCTTCTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000463577.2
CDS-3UTR TCA 90 bp GTCAGAGGAAGAAGGCGATTCGGGAGGCCACGGTCTTGCAGCCGTTGGAGGAGATCCATTTCTGGAAACTaGGAAGGCTCCACCTGGCTT +
Preference number: 4 (lower is better)
Translates to: VRGRRRFGRPRSCSRWRRSISGN*EGSTWL
Trigger: AAGCCAGGTGGAGCCTTCTCAGTTTCCAGAAATGGA...TCTCCTCCAACGGCTGCAAGACCGTGGCCTCCCGAATCGCCTTCTTCCTCTGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000463577.2
CDS-3UTR TCA 90 bp GAGCTGCTCGTCTTCAGGGAAGAAGGTGGTGCTGTCCAGCACAGCCTGGACAACAGAGGGAAAACTTCTTaGCCTGGCAGGGCTTCCACA +
Preference number: 4 (lower is better)
Translates to: ELLVFREEGGAVQHSLDNRGKTS*PGRAST
Trigger: TGTGGAAGCCCTGCCAGGTCAAGAAGTTTTCCCTCT...GTTGTCCAGGCTGTGCTGGACAGCACCACCTTCTTCCCTGAAGACGAGCAGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373281.8
ENST00000463577.2
CDS-3UTR TCA 90 bp GAGGAGAAGAGCTGCTCGTCTTCAGGGAAGAAGGTGGTGCTGTCCAGCACAGCCCTGACTTTCCCTCACTaGACTTCCAGGAAGGCATCG +
Preference number: 4 (lower is better)
Translates to: EEKSCSSSGKKVVLSSTALTFPH*TSRKAS
Trigger: CGATGCCTTCCTGGAAGTTCAGTGAGGGAAAGTCAG...GGCTGTGCTGGACAGCACCACCTTCTTCCCTGAAGACGAGCAGCTCTTCTCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373281.8
ENST00000463577.2
CDS-3UTR TCA 90 bp CAGGGAAGAAGGTGGTGCTGTCCAGCACAGCCTGGACAACCTCATCCCTTGGCTCATGATGCCCGAGTTTaGGAAGCCATCTGCAGGAAG +
Preference number: 4 (lower is better)
Translates to: QGRRWCCPAQPGQPHPLAHDARV*EAICRK
Trigger: CTTCCTGCAGATGGCTTCTCAAACTCGGGCATCATG...AGCCAAGGGATGAGGTTGTCCAGGCTGTGCTGGACAGCACCACCTTCTTCCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373281.8
ENST00000463577.2
CDS-3UTR GCA 90 bp CCTTCCTGGCCATCTGTCCCGTGGCCTAGCCGACACTCCGTTCATCTCACTTGGTTGGAGGAGAAGAGCTaGTCGTCTTCAGGGAAGAAG +
Preference number: 4 (lower is better)
Translates to: PSWPSVPWPSRHSVHLTWLEEKS*SSSGKK
Trigger: CTTCTTCCCTGAAGACGAGCAGCTCTTCTCCTCCAA...CCAAGTGAGATGAACGGAGTGTCGGCTAGGCCACGGGACAGATGGCCAGGAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000373284.10
ENST00000463256.5
ENST00000463577.2
ENST00000496460.5
CDS-3UTR GCA 90 bp CGATTCGGGAGGCCACGGTCTTGCAGCCGTTGGAGGAGAAGAGCTGCTCGTCTTTTGGAGGAGAAGAGCTaGTCGTCTTCAGGGAAGAAG +
Preference number: 4 (lower is better)
Translates to: RFGRPRSCSRWRRRAARLLEEKS*SSSGKK
Trigger: CTTCTTCCCTGAAGACGAGCAGCTCTTCTCCTCCAA...AAGACGAGCAGCTCTTCTCCTCCAACGGCTGCAAGACCGTGGCCTCCCGAATCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000463256.5
ENST00000463577.2
ENST00000496460.5
CDS-3UTR GCA 90 bp TCCTGGCCATCTGTCCCGTGGCCTAGCCGACACTCCGTTCATCTCACTTGGTGCTTGGAGGAGAAGAGCTaGTCGTCTTCAGGGAAGAAG +
Preference number: 4 (lower is better)
Translates to: SWPSVPWPSRHSVHLTWCLEEKS*SSSGKK
Trigger: CTTCTTCCCTGAAGACGAGCAGCTCTTCTCCTCCAA...GCACCAAGTGAGATGAACGGAGTGTCGGCTAGGCCACGGGACAGATGGCCAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000373284.10
ENST00000463256.5
ENST00000463577.2
ENST00000496460.5
CDS-3UTR GCA 90 bp ACCAGGCCCAAGTGGCAGCTTGAGTCCCTCCATTTCTGGAAACTGAGAAGGCTCTGGCCGGGGCCAAGATaGTCTCGAGCCAGTTTAGAG +
Preference number: 4 (lower is better)
Translates to: TRPKWQLESLHFWKLRRLWPGPR*SRASLE
Trigger: CTCTAAACTGGCTCGAGAGCATCTTGGCCCCGGCCA...GAGCCTTCTCAGTTTCCAGAAATGGAGGGACTCAAGCTGCCACTTGGGCCTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000373284.10
ENST00000463577.2
CDS-3UTR GCA 90 bp CCATTTCTGGAAACTGAGAAGGCTCCACCTGGCTTGATATGGACACAGGGTGTGGGGGAGGAGGTATGGTaGCCGACCAAGGAGGCAAGG +
Preference number: 4 (lower is better)
Translates to: PFLETEKAPPGLIWTQGVGEEVW*PTKEAR
Trigger: CCTTGCCTCCTTGGTCGGGCACCATACCTCCTCCCC...CACACCCTGTGTCCATATCAAGCCAGGTGGAGCCTTCTCAGTTTCCAGAAATGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000373284.10
ENST00000463577.2
CDS-3UTR GCA 90 bp GGGGCATCATTATTGGCCCCGCTGTTCAGAAGCAGAGACAGAGGCTCAGAGAGGGCCACCTGGTTGATCTaGTTGCCACCCGTGTTGCTA +
Preference number: 4 (lower is better)
Translates to: GASLLAPLFRSRDRGSERATWLI*LPPVLL
Trigger: TAGCAACACGGGTGGCAAGCAGATCAACCAGGTGGC...CCTCTCTGAGCCTCTGTCTCTGCTTCTGAACAGCGGGGCCAATAATGATGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373281.8
ENST00000463577.2
CDS-3UTR GCA 90 bp GGTGGCAGACTGAGGAGGGAGCACCGCCACGAGCCACAGTCCCTGAGTTATAATTCACAAAGCTGGGAGTaGCAAAGCCAGGCTCAGAAC +
Preference number: 4 (lower is better)
Translates to: GGRLRREHRHEPQSLSYNSQSWE*QSQAQN
Trigger: GTTCTGAGCCTGGCTTTGGCACTCCCAGCTTTGTGA...ATTATAACTCAGGGACTGTGGCTCGTGGCGGTGCTCCCTCCTCAGTCTGCCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373281.8
ENST00000463577.2
CDS-3UTR GCA 90 bp CTGGGTGTAGGACTCAGGGGCTGTAAGGCTCACCCAAAGTCACAAAGCTGGGAGGGGCAGGAGGAAAAATaGTGGCCTCAGTTCCCTCAG +
Preference number: 4 (lower is better)
Translates to: LGVGLRGCKAHPKSQSWEGQEEK*WPQFPQ
Trigger: CTGAGGGAACTGAGGCCAGCATTTTTCCTCCTGCCC...CTCCCAGCTTTGTGACTTTGGGTGAGCCTTACAGCCCCTGAGTCCTACACCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000373281.8
ENST00000463577.2
ENST00000493439.1
CDS-3UTR CCA 90 bp ATCTCACTTGGTGCTCTGGGTTCCTGTGACAGAGGCCCCTGGCCTTTCCTGCATGACTTCCATCAGGCCTaGGGGCATCTTGTCCATCTC +
Preference number: 4 (lower is better)
Translates to: ISLGALGSCDRGPWPFLHDFHQA*GHLVHL
Trigger: GAGATGGACAAGATGCCCCCAGGCCTGATGGAAGTC...ATGCAGGAAAGGCCAGGGGCCTCTGTCACAGGAACCCAGAGCACCAAGTGAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000373284.10
ENST00000463256.5
ENST00000463577.2
ENST00000496460.5
CDS-3UTR CCA 90 bp TCTCACTTGGTGCTCTGGGTTCCTGTGACAGAGGCCCCTGGCCTTTCCTGCATGTGGCTTTGCGGTAATTaGTCCCGTATACCACCCAGG +
Preference number: 4 (lower is better)
Translates to: SHLVLWVPVTEAPGLSCMWLCGN*SRIPPR
Trigger: CCTGGGTGGTATACGGGACCAATTACCGCAAAGCCA...CATGCAGGAAAGGCCAGGGGCCTCTGTCACAGGAACCCAGAGCACCAAGTGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000373284.10
ENST00000463256.5
ENST00000463577.2
ENST00000496460.5
CDS-3UTR CCA 90 bp GAGCTGCTCGTCTTCAGGGAAGAAGGTGGTGCTGTCCAGCACAGCCTGGACAACTGGCTTTGCGGTAATTaGTCCCGTATACCACCCAGG +
Preference number: 4 (lower is better)
Translates to: ELLVFREEGGAVQHSLDNWLCGN*SRIPPR
Trigger: CCTGGGTGGTATACGGGACCAATTACCGCAAAGCCA...GTTGTCCAGGCTGTGCTGGACAGCACCACCTTCTTCCCTGAAGACGAGCAGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000463256.5
ENST00000463577.2
ENST00000496460.5
CDS-3UTR CCA 90 bp ACAAGAACTCTGTTCCTATTTTTCCCAGGCCTGTGTCCTCCTCACCACAAAAGACGGACGTGGTGCCGCTaGAGCGGGAGGAAGGGCACC +
Preference number: 4 (lower is better)
Translates to: TRTLFLFFPGLCPPHHKRRTWCR*SGRKGT
Trigger: GGTGCCCTTCCTCCCGCTCCAGCGGCACCACGTCCG...TCTTTTGTGGTGAGGAGGACACAGGCCTGGGAAAAATAGGAACAGAGTTCTTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373281.8
ENST00000463577.2
CDS-3UTR CCA 90 bp GATGGCTTTGCGGTAATTGGTCCCGTATACCACCCAGGAGGAGCCCAGGAAAGGTCTCACTTGGTGCTCTaGGTTCCTGTGACAGAGGCC +
Preference number: 4 (lower is better)
Translates to: DGFAVIGPVYHPGGAQERSHLVL*VPVTEA
Trigger: GGCCTCTGTCACAGGAACCCAGAGCACCAAGTGAGA...CCTTTCCTGGGCTCCTCCTGGGTGGTATACGGGACCAATTACCGCAAAGCCATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000463256.5
ENST00000463577.2
ENST00000496460.5
CDS-3UTR CCA 90 bp GGAAGAAGGCGATTCGGGAGGCCACGGTCTTGCAGCCGTTGGAGGAGAAGAGCTGAGTCCCTCCATTTCTaGAAACTGAGAAGGCTCCAC +
Preference number: 4 (lower is better)
Translates to: GRRRFGRPRSCSRWRRRAESLHF*KLRRLH
Trigger: GTGGAGCCTTCTCAGTTTCCAGAAATGGAGGGACTC...AGCTCTTCTCCTCCAACGGCTGCAAGACCGTGGCCTCCCGAATCGCCTTCTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000463577.2
CDS-3UTR CCA 90 bp TCCTGGCCATCTGTCCCGTGGCCTAGCCGACACTCCGTTCATCTCACTTGGTGCGAGTCCCTCCATTTCTaGAAACTGAGAAGGCTCCAC +
Preference number: 4 (lower is better)
Translates to: SWPSVPWPSRHSVHLTWCESLHF*KLRRLH
Trigger: GTGGAGCCTTCTCAGTTTCCAGAAATGGAGGGACTC...GCACCAAGTGAGATGAACGGAGTGTCGGCTAGGCCACGGGACAGATGGCCAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000373284.10
ENST00000463577.2
CDS-3UTR CCA 90 bp ACCAGGCCCAAGTGGCAGCTTGAGTCCCTCCATTTCTGGAAACTGAGAAGGCTCGCCTCCAATGCCACCTaGTTGATCTGCTTGCCACCC +
Preference number: 4 (lower is better)
Translates to: TRPKWQLESLHFWKLRRLASNAT*LICLPP
Trigger: GGGTGGCAAGCAGATCAACCAGGTGGCATTGGAGGC...GAGCCTTCTCAGTTTCCAGAAATGGAGGGACTCAAGCTGCCACTTGGGCCTGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373281.8
ENST00000373284.10
ENST00000463577.2
CDS-3UTR CCA 90 bp CGCCTTCTGGGTGTAGGACTCAGGGGCTGTAAGGCTCACCCAAAGTCACAAAGCCAGGAGGAAAAATGCTaGCCTCAGTTCCCTCAGCCG +
Preference number: 4 (lower is better)
Translates to: RLLGVGLRGCKAHPKSQSQEEKC*PQFPQP
Trigger: CGGCTGAGGGAACTGAGGCCAGCATTTTTCCTCCTG...GCTTTGTGACTTTGGGTGAGCCTTACAGCCCCTGAGTCCTACACCCAGAAGGCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373281.8
ENST00000463577.2
ENST00000493439.1
3UTR CAA 72 bp CTGCGCCACGCCTCCAATGCCACCTGGTTGATCTGCTaGCCACCCGTGTTGCTGATGAAGATGAAGATGGCT +
Preference number: 4 (lower is better)
Translates to: LRHASNATWLIC*PPVLLMKMKMA
Trigger: AGCCATCTTCATCTTCATCAGCAACACGGGTGGCAAGCAGATCAACCAGGTGGCATTGGAGGCGTGGCGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000493439.1
ENST00000496460.5
CDS-3UTR TCA 90 bp GTCCCTCCATTTCTGGAAACTGAGAAGGCTCCACCTGGCTTGATATGGACACAGGAGGTCAAGGCTCAGTaGGGTTCTGGGGTGACCAGG +
Preference number: 4 (lower is better)
Translates to: VPPFLETEKAPPGLIWTQEVKAQ*GSGVTR
Trigger: CCTGGTCACCCCAGAACCTCACTGAGCCTTGACCTC...CTGTGTCCATATCAAGCCAGGTGGAGCCTTCTCAGTTTCCAGAAATGGAGGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000373284.10
ENST00000463577.2
CDS-3UTR TCA 90 bp GGGCAGGATTGGACCCTCGCTTCCCCGCTGCCACCTGACATAGGAACATGGCTCACGAGCCACAGTCCCTaGGTTATAATTCACAGTAAG +
Preference number: 4 (lower is better)
Translates to: GQDWTLASPLPPDIGTWLTSHSP*VIIHSK
Trigger: CTTACTGTGAATTATAACTCAGGGACTGTGGCTCGT...GAGCCATGTTCCTATGTCAGGTGGCAGCGGGGAAGCGAGGGTCCAATCCTGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373281.8
ENST00000463577.2
CDS-3UTR TCA 90 bp TCAGAGAGTCAGAGGAAGAAGGCGATTCGGGAGGCCACGGTCTTGCAGCCGTTGTCCATTTCTGGAAACTaGGAAGGCTCCACCTGGCTT +
Preference number: 4 (lower is better)
Translates to: SESQRKKAIREATVLQPLSISGN*EGSTWL
Trigger: AAGCCAGGTGGAGCCTTCTCAGTTTCCAGAAATGGA...CAACGGCTGCAAGACCGTGGCCTCCCGAATCGCCTTCTTCCTCTGACTCTCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000463577.2
CDS-3UTR TCA 90 bp GCTGCGCCACGCCTCCAATGCCACCTGGTTGATCTGCTTGCCACCCGTGTTGCTGAGCCCAGAATTTGCTaGGAATGTCCAAAGGGAAAT +
Preference number: 4 (lower is better)
Translates to: AAPRLQCHLVDLLATRVAEPRIC*ECPKGN
Trigger: ATTTCCCTTTGGACATTCTCAGCAAATTCTGGGCTC...AGCAACACGGGTGGCAAGCAGATCAACCAGGTGGCATTGGAGGCGTGGCGCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373281.8
ENST00000463577.2
CDS-3UTR TCA 90 bp AGGAAGAAGGCGATTCGGGAGGCCACGGTCTTGCAGCCGTTGGAGGAGAAGAGCGGCGATCAAAAAGACTaGGCCCAGAATTTGCTGAGA +
Preference number: 4 (lower is better)
Translates to: RKKAIREATVLQPLEEKSGDQKD*AQNLLR
Trigger: TCTCAGCAAATTCTGGGCTCAGTCTTTTTGATCGCC...GCTCTTCTCCTCCAACGGCTGCAAGACCGTGGCCTCCCGAATCGCCTTCTTCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373281.8
ENST00000463577.2
CDS-3UTR TCA 90 bp GGGCAGGATTGGACCCTCGCTTCCCCGCTGCCACCTGACATAGGAACATGGCTCTTTGTGTCCCTCAACTaGCTTTCCCTCACTGAACTT +
Preference number: 4 (lower is better)
Translates to: GQDWTLASPLPPDIGTWLFVSLN*LSLTEL
Trigger: AAGTTCAGTGAGGGAAAGTCAGTTGAGGGACACAAA...GAGCCATGTTCCTATGTCAGGTGGCAGCGGGGAAGCGAGGGTCCAATCCTGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373281.8
ENST00000463577.2
CDS-3UTR TCA 90 bp GTCCCTCCATTTCTGGAAACTGAGAAGGCTCCACCTGGCTTGATATGGACACAGAGGCTGAGACTCAGATaGGGACTAGCGCAGGGCAGG +
Preference number: 4 (lower is better)
Translates to: VPPFLETEKAPPGLIWTQRLRLR*GLAQGR
Trigger: CCTGCCCTGCGCTAGTCCTCATCTGAGTCTCAGCCT...CTGTGTCCATATCAAGCCAGGTGGAGCCTTCTCAGTTTCCAGAAATGGAGGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373281.8
ENST00000463577.2
CDS-3UTR GCA 90 bp GGAGAAGAGCTGCTCGTCTTCAGGGAAGAAGGTGGTGCTGTCCAGCACAGCCTGTTGGAGGAGAAGAGCTaGTCGTCTTCAGGGAAGAAG +
Preference number: 4 (lower is better)
Translates to: GEELLVFREEGGAVQHSLLEEKS*SSSGKK
Trigger: CTTCTTCCCTGAAGACGAGCAGCTCTTCTCCTCCAA...CAGGCTGTGCTGGACAGCACCACCTTCTTCCCTGAAGACGAGCAGCTCTTCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000463256.5
ENST00000463577.2
ENST00000496460.5
CDS-3UTR GCA 90 bp GGTGGCAGACTGAGGAGGGAGCACCGCCACGAGCCACAGTCCCTGAGTTATAATTTGGAGGAGAAGAGCTaGTCGTCTTCAGGGAAGAAG +
Preference number: 4 (lower is better)
Translates to: GGRLRREHRHEPQSLSYNLEEKS*SSSGKK
Trigger: CTTCTTCCCTGAAGACGAGCAGCTCTTCTCCTCCAA...ATTATAACTCAGGGACTGTGGCTCGTGGCGGTGCTCCCTCCTCAGTCTGCCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000373284.10
ENST00000463577.2
CDS-3UTR CCA 90 bp GGGGCATCATTATTGGCCCCGCTGTTCAGAAGCAGAGACAGAGGCTCAGAGAGGTGGCTTTGCGGTAATTaGTCCCGTATACCACCCAGG +
Preference number: 4 (lower is better)
Translates to: GASLLAPLFRSRDRGSERWLCGN*SRIPPR
Trigger: CCTGGGTGGTATACGGGACCAATTACCGCAAAGCCA...CCTCTCTGAGCCTCTGTCTCTGCTTCTGAACAGCGGGGCCAATAATGATGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373281.8
ENST00000463577.2
CDS-3UTR CCA 90 bp TCGTCTTCAGGGAAGAAGGTGGTGCTGTCCAGCACAGCCTGGACAACCTCATCCTGGCTTTGCGGTAATTaGTCCCGTATACCACCCAGG +
Preference number: 4 (lower is better)
Translates to: SSSGKKVVLSSTAWTTSSWLCGN*SRIPPR
Trigger: CCTGGGTGGTATACGGGACCAATTACCGCAAAGCCA...GGATGAGGTTGTCCAGGCTGTGCTGGACAGCACCACCTTCTTCCCTGAAGACGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373281.8
ENST00000463256.5
ENST00000463577.2
ENST00000496460.5
CDS-3UTR CCA 90 bp TCTAGGAGGCGCTCTTCCATGATGCCCGAGTTTGAGAAGCCATCTGCAGGAAGGTCTCACTTGGTGCTCTaGGTTCCTGTGACAGAGGCC +
Preference number: 4 (lower is better)
Translates to: SRRRSSMMPEFEKPSAGRSHLVL*VPVTEA
Trigger: GGCCTCTGTCACAGGAACCCAGAGCACCAAGTGAGA...CCTTCCTGCAGATGGCTTCTCAAACTCGGGCATCATGGAAGAGCGCCTCCTAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373281.8
ENST00000463577.2
CDS-3UTR CCA 90 bp GTCCCTCCATTTCTGGAAACTGAGAAGGCTCCACCTGGCTTGATATGGACACAGTGGCCATCTGTCCCGTaGCCTAGCCGACACTCCGTT +
Preference number: 4 (lower is better)
Translates to: VPPFLETEKAPPGLIWTQWPSVP*PSRHSV
Trigger: AACGGAGTGTCGGCTAGGCCACGGGACAGATGGCCA...CTGTGTCCATATCAAGCCAGGTGGAGCCTTCTCAGTTTCCAGAAATGGAGGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000373284.10
ENST00000463577.2
CDS-3UTR CCA 90 bp CTCAGAGAGTCAGAGGAAGAAGGCGATTCGGGAGGCCACGGTCTTGCAGCCGTTGAGTCCCTCCATTTCTaGAAACTGAGAAGGCTCCAC +
Preference number: 4 (lower is better)
Translates to: LRESEEEGDSGGHGLAAVESLHF*KLRRLH
Trigger: GTGGAGCCTTCTCAGTTTCCAGAAATGGAGGGACTC...AACGGCTGCAAGACCGTGGCCTCCCGAATCGCCTTCTTCCTCTGACTCTCTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000463577.2
CDS-3UTR CCA 90 bp CTTGGTGCTCTGGGTTCCTGTGACAGAGGCCCCTGGCCTTTCCTGCATGGCCTGGAAAACTTCTTGACCTaGCAGGGCTTCCACAAAGAA +
Preference number: 4 (lower is better)
Translates to: LGALGSCDRGPWPFLHGLENFLT*QGFHKE
Trigger: TTCTTTGTGGAAGCCCTGCCAGGTCAAGAAGTTTTC...CAGGCCATGCAGGAAAGGCCAGGGGCCTCTGTCACAGGAACCCAGAGCACCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373281.8
ENST00000463577.2
CDS-3UTR CCA 90 bp ATCTCACTTGGTGCTCTGGGTTCCTGTGACAGAGGCCCCTGGCCTTTCCTGCATGTGTTGCTAAAACCATaGGGGACCCAGGCTGAGACT +
Preference number: 4 (lower is better)
Translates to: ISLGALGSCDRGPWPFLHVLLKP*GTQAET
Trigger: AGTCTCAGCCTGGGTCCCCCATGGTTTTAGCAACAC...ATGCAGGAAAGGCCAGGGGCCTCTGTCACAGGAACCCAGAGCACCAAGTGAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373281.8
ENST00000463577.2
CDS-3UTR CCA 90 bp GAAGCCATCTGCAGGAAGGGTAGGTGGGGAGGGGACTTTGTGCTTCACAAGAGGCCAAAGTCACAAAGCTaGGAGTGCCAAAGCCAGGCT +
Preference number: 4 (lower is better)
Translates to: EAICRKGRWGGDFVLHKRPKSQS*ECQSQA
Trigger: AGCCTGGCTTTGGCACTCCCAGCTTTGTGACTTTGG...CCTCTTGTGAAGCACAAAGTCCCCTCCCCACCTACCCTTCCTGCAGATGGCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373281.8
ENST00000463577.2
ENST00000493439.1
CDS-3UTR CCA 90 bp TCTAGGAGGCGCTCTTCCATGATGCCCGAGTTTGAGAAGCCATCTGCAGGAAGGCAGGAGGAAAAATGCTaGCCTCAGTTCCCTCAGCCG +
Preference number: 4 (lower is better)
Translates to: SRRRSSMMPEFEKPSAGRQEEKC*PQFPQP
Trigger: CGGCTGAGGGAACTGAGGCCAGCATTTTTCCTCCTG...CCTTCCTGCAGATGGCTTCTCAAACTCGGGCATCATGGAAGAGCGCCTCCTAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373281.8
ENST00000463577.2
ENST00000493439.1
CDS-3UTR CCA 90 bp AGACTGAGGAGGGAGCACCGCCACGAGCCACAGTCCCTGAGTTATAATTCACAGGAGTTTGAGAAGCCATaGTGCGGGTTGTCCAGCACC +
Preference number: 4 (lower is better)
Translates to: RLRREHRHEPQSLSYNSQEFEKP*CGLSST
Trigger: GGTGCTGGACAACCCGCACCATGGCTTCTCAAACTC...CTGTGAATTATAACTCAGGGACTGTGGCTCGTGGCGGTGCTCCCTCCTCAGTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373284.10
CDS-3UTR GCA 90 bp GATGAAGATGAAGATGGCTTTGCGGTAATTGGTCCCGTATACCACCCAGGAGGAAAAAGGCGCCCAAGGTaGAGCGCAGGGAAGCCAGGT +
Preference number: 4 (lower is better)
Translates to: DEDEDGFAVIGPVYHPGGKRRPR*SAGKPG
Trigger: ACCTGGCTTCCCTGCGCTGCACCTTGGGCGCCTTTT...TCCTCCTGGGTGGTATACGGGACCAATTACCGCAAAGCCATCTTCATCTTCATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000463256.5
ENST00000463577.2
ENST00000493439.1
ENST00000496460.5
CDS-3UTR GCA 90 bp CTTTTGTGTCCCTCAACTGACTTTCCCTCACTGAACTTCCAGGAAGGCATCGGGTGGCCGGGGCCAAGATaGTCTCGAGCCAGTTTAGAG +
Preference number: 4 (lower is better)
Translates to: LLCPSTDFPSLNFQEGIGWPGPR*SRASLE
Trigger: CTCTAAACTGGCTCGAGAGCATCTTGGCCCCGGCCA...CCCGATGCCTTCCTGGAAGTTCAGTGAGGGAAAGTCAGTTGAGGGACACAAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373281.8
ENST00000463577.2
CDS-3UTR CCA 90 bp GCTTCCACAAAGAAGTGGCGATCAAAAAGACTGAGCCCAGAATTTGCTGAGAATGACCAGGGGTTTCCCTaGGGAAGGTGGCCGGGGCCA +
Preference number: 4 (lower is better)
Translates to: ASTKKWRSKRLSPEFAENDQGFP*GRWPGP
Trigger: TGGCCCCGGCCACCTTCCCCAGGGAAACCCCTGGTC...ATTCTCAGCAAATTCTGGGCTCAGTCTTTTTGATCGCCACTTCTTTGTGGAAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000373281.8
ENST00000463577.2
CDS-3UTR TCA 90 bp TCTCACTTGGTGCTCTGGGTTCCTGTGACAGAGGCCCCTGGCCTTTCCTGCATGACGAGCCACAGTCCCTaGGTTATAATTCACAGTAAG +
Preference number: 4 (lower is better)
Translates to: SHLVLWVPVTEAPGLSCMTSHSP*VIIHSK
Trigger: CTTACTGTGAATTATAACTCAGGGACTGTGGCTCGT...CATGCAGGAAAGGCCAGGGGCCTCTGTCACAGGAACCCAGAGCACCAAGTGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000373284.10
ENST00000463577.2
CDS-3UTR TCA 90 bp AAATTAAAAACATCTAAAACCAGGCCCAAGTGGCAGCTTGAGTCCCTCCATTTCGCAAGGGTGGCAGACTaGGGAGGGAGCACCGCCACG +
Preference number: 4 (lower is better)
Translates to: KLKTSKTRPKWQLESLHFARVAD*GGSTAT
Trigger: CGTGGCGGTGCTCCCTCCTCAGTCTGCCACCCTTGC...GAAATGGAGGGACTCAAGCTGCCACTTGGGCCTGGTTTTAGATGTTTTTAATTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000373284.10
ENST00000463577.2
CDS-3UTR GCA 90 bp GCTTCCACAAAGAAGTGGCGATCAAAAAGACTGAGCCCAGAATTTGCTGAGAATGCCCCTGGCCTTTCCTaGATGGCCTGGCCATCAGGG +
Preference number: 4 (lower is better)
Translates to: ASTKKWRSKRLSPEFAENAPGLS*MAWPSG
Trigger: CCCTGATGGCCAGGCCATGCAGGAAAGGCCAGGGGC...ATTCTCAGCAAATTCTGGGCTCAGTCTTTTTGATCGCCACTTCTTTGTGGAAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373281.8
ENST00000463577.2
CDS-3UTR GCA 90 bp CAATGCCACCTGGTTGATCTGCTTGCCACCCGTGTTGCTGATGAAGATGAAGATTGGCCGGGGCCAAGATaGTCTCGAGCCAGTTTAGAG +
Preference number: 4 (lower is better)
Translates to: QCHLVDLLATRVADEDEDWPGPR*SRASLE
Trigger: CTCTAAACTGGCTCGAGAGCATCTTGGCCCCGGCCA...ATCTTCATCTTCATCAGCAACACGGGTGGCAAGCAGATCAACCAGGTGGCATTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496460.5
CDS-3UTR CCA 90 bp AGACAGAGGCTCAGAGAGGCGGAGCCATGCTGCCTGAGGAAACACAGCGAGGATGAAAACTTCTTGACCTaGCAGGGCTTCCACAAAGAA +
Preference number: 4 (lower is better)
Translates to: RQRLREAEPCCLRKHSEDENFLT*QGFHKE
Trigger: TTCTTTGTGGAAGCCCTGCCAGGTCAAGAAGTTTTC...ATCCTCGCTGTGTTTCCTCAGGCAGCATGGCTCCGCCTCTCTGAGCCTCTGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373281.8
ENST00000463577.2
CDS-3UTR GCA 90 bp AAATTAAAAACATCTAAAACCAGGCCCAAGTGGCAGCTTGAGTCCCTCCATTTCTCGTTGAGCACGCAGTaGCGGACGTGGTGCCGCTGG +
Preference number: 4 (lower is better)
Translates to: KLKTSKTRPKWQLESLHFSLSTQ*RTWCRW
Trigger: CCAGCGGCACCACGTCCGGCACTGCGTGCTCAACGA...GAAATGGAGGGACTCAAGCTGCCACTTGGGCCTGGTTTTAGATGTTTTTAATTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000373284.10
ENST00000463577.2
CDS-3UTR CCA 90 bp GTCCCTCCATTTCTGGAAACTGAGAAGGCTCCACCTGGCTTGATATGGACACAGAAAACCAGGCCCAAGTaGCAGCTTGAGTCCCTCCAT +
Preference number: 4 (lower is better)
Translates to: VPPFLETEKAPPGLIWTQKTRPK*QLESLH
Trigger: ATGGAGGGACTCAAGCTGCCACTTGGGCCTGGTTTT...CTGTGTCCATATCAAGCCAGGTGGAGCCTTCTCAGTTTCCAGAAATGGAGGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000373284.10
ENST00000463577.2
CDS-3UTR CCA 90 bp CCATTTCTGGAAACTGAGAAGGCTCCACCTGGCTTGATATGGACACAGGGTGTGGTGTTGCTAAAACCATaGGGGACCCAGGCTGAGACT +
Preference number: 4 (lower is better)
Translates to: PFLETEKAPPGLIWTQGVVLLKP*GTQAET
Trigger: AGTCTCAGCCTGGGTCCCCCATGGTTTTAGCAACAC...CACACCCTGTGTCCATATCAAGCCAGGTGGAGCCTTCTCAGTTTCCAGAAATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373281.8
ENST00000463577.2
CDS-3UTR TCA 90 bp TCTAAAACCAGGCCCAAGTGGCAGCTTGAGTCCCTCCATTTCTGGAAACTGAGAACACAGCGAGGATTCTaGGAGCTGGGACTAAAGGAC +
Preference number: 4 (lower is better)
Translates to: SKTRPKWQLESLHFWKLRTQRGF*ELGLKD
Trigger: GTCCTTTAGTCCCAGCTCTCAGAATCCTCGCTGTGT...TCTCAGTTTCCAGAAATGGAGGGACTCAAGCTGCCACTTGGGCCTGGTTTTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373281.8
ENST00000463577.2
CDS-3UTR GCA 90 bp GATGAAGATGAAGATGGCTTTGCGGTAATTGGTCCCGTATACCACCCAGGAGGATCACAAAGCTGGGAGTaGCAAAGCCAGGCTCAGAAC +
Preference number: 4 (lower is better)
Translates to: DEDEDGFAVIGPVYHPGGSQSWE*QSQAQN
Trigger: GTTCTGAGCCTGGCTTTGGCACTCCCAGCTTTGTGA...TCCTCCTGGGTGGTATACGGGACCAATTACCGCAAAGCCATCTTCATCTTCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000463577.2
ENST00000493439.1
CDS-3UTR CCA 90 bp TCTAAAACCAGGCCCAAGTGGCAGCTTGAGTCCCTCCATTTCTGGAAACTGAGATGGCTTTGCGGTAATTaGTCCCGTATACCACCCAGG +
Preference number: 4 (lower is better)
Translates to: SKTRPKWQLESLHFWKLRWLCGN*SRIPPR
Trigger: CCTGGGTGGTATACGGGACCAATTACCGCAAAGCCA...TCTCAGTTTCCAGAAATGGAGGGACTCAAGCTGCCACTTGGGCCTGGTTTTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000373284.10
ENST00000463577.2
CDS-3UTR CCA 90 bp AAATTAAAAACATCTAAAACCAGGCCCAAGTGGCAGCTTGAGTCCCTCCATTTCGGAGGGGAGGAGGTATaGTGCCCGACCAAGGAGGCA +
Preference number: 4 (lower is better)
Translates to: KLKTSKTRPKWQLESLHFGGEEV*CPTKEA
Trigger: TGCCTCCTTGGTCGGGCACCATACCTCCTCCCCTCC...GAAATGGAGGGACTCAAGCTGCCACTTGGGCCTGGTTTTAGATGTTTTTAATTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000373284.10
ENST00000463577.2
CDS-3UTR CCA 90 bp ACAAGAACTCTGTTCCTATTTTTCCCAGGCCTGTGTCCTCCTCACCACAAAAGAGACTTCCATCAGGCCTaGGGGCATCTTGTCCATCTC +
Preference number: 4 (lower is better)
Translates to: TRTLFLFFPGLCPPHHKRDFHQA*GHLVHL
Trigger: GAGATGGACAAGATGCCCCCAGGCCTGATGGAAGTC...TCTTTTGTGGTGAGGAGGACACAGGCCTGGGAAAAATAGGAACAGAGTTCTTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000373281.8
ENST00000463577.2
CDS-3UTR TCA 90 bp AAATTAAAAACATCTAAAACCAGGCCCAAGTGGCAGCTTGAGTCCCTCCATTTCGGAGGCGCTCTTCCATaGTGCCCGAGTTTGAGAAGC +
Preference number: 4 (lower is better)
Translates to: KLKTSKTRPKWQLESLHFGGALP*CPSLRS
Trigger: GCTTCTCAAACTCGGGCATCATGGAAGAGCGCCTCC...GAAATGGAGGGACTCAAGCTGCCACTTGGGCCTGGTTTTAGATGTTTTTAATTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000373284.10
ENST00000463577.2
CDS-3UTR TCA 90 bp AAATTAAAAACATCTAAAACCAGGCCCAAGTGGCAGCTTGAGTCCCTCCATTTCAGGAGCCAACTCCACTaGAAACGCTCCACTTCCCCC +
Preference number: 4 (lower is better)
Translates to: KLKTSKTRPKWQLESLHFRSQLH*KRSTSP
Trigger: GGGGGAAGTGGAGCGTTTTCAGTGGAGTTGGCTCCT...GAAATGGAGGGACTCAAGCTGCCACTTGGGCCTGGTTTTAGATGTTTTTAATTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373281.8
ENST00000463577.2
CDS-3UTR CCA 90 bp GTCCCTCCATTTCTGGAAACTGAGAAGGCTCCACCTGGCTTGATATGGACACAGGCTTCCACAAAGAAGTaGCGATCAAAAAGACTGAGC +
Preference number: 4 (lower is better)
Translates to: VPPFLETEKAPPGLIWTQASTKK*RSKRLS
Trigger: GCTCAGTCTTTTTGATCGCCACTTCTTTGTGGAAGC...CTGTGTCCATATCAAGCCAGGTGGAGCCTTCTCAGTTTCCAGAAATGGAGGGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373281.8
ENST00000463577.2
CDS-3UTR CCA 90 bp ACAAGAACTCTGTTCCTATTTTTCCCAGGCCTGTGTCCTCCTCACCACAAAAGACCAAAGTCACAAAGCTaGGAGTGCCAAAGCCAGGCT +
Preference number: 4 (lower is better)
Translates to: TRTLFLFFPGLCPPHHKRPKSQS*ECQSQA
Trigger: AGCCTGGCTTTGGCACTCCCAGCTTTGTGACTTTGG...TCTTTTGTGGTGAGGAGGACACAGGCCTGGGAAAAATAGGAACAGAGTTCTTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373281.8
ENST00000463577.2
CDS CCA 90 bp GCGGGCCCCGCCCCTCGGTCCCACCCTCTGGGTCCTCAGCTTCTCTaGCCGGCGCCAGCCGGGCTCCCAGGGCTCCCAGCGCTCCCGCGT +
Preference number: 5 (lower is better)
Translates to: AGPAPRSHPLGPQLL*PAPAGLPGLPALPR
Trigger: ACGCGGGAGCGCTGGGAGCCCTGGGAGCCCGGCTGGCGCCGGCCAGAGAAGCTGAGGACCCAGAGGGTGGGACCGAGGGGCGGGGCCCGC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472723.1
CDS CCA 90 bp TCCACCCTCCCAAGTCTGCGGGCCCCGCCCCTCGGTCCCACCCTCTaGGTCCTCAGCTTCTCTGGCCGGCGCCAGCCGGGCTCCCAGGGC +
Preference number: 5 (lower is better)
Translates to: STLPSLRAPPLGPTL*VLSFSGRRQPGSQG
Trigger: GCCCTGGGAGCCCGGCTGGCGCCGGCCAGAGAAGCTGAGGACCCAGAGGGTGGGACCGAGGGGCGGGGCCCGCAGACTTGGGAGGGTGGA
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472723.1
CDS GCA 90 bp CCGGCAAGTCGGGCCGGAAGTCGCATTCGCAAAAGGCGCCCAAGGTaGAGCGCAGGGAAGCCAGGTCCCAGGCGGCGGCCGCGGCCGAGA +
Preference number: 5 (lower is better)
Translates to: PASRAGSRIRKRRPR*SAGKPGPRRRPRPR
Trigger: TCTCGGCCGCGGCCGCCGCCTGGGACCTGGCTTCCCTGCGCTGCACCTTGGGCGCCTTTTGCGAATGCGACTTCCGGCCCGACTTGCCGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000373284.10
ENST00000463256.5
ENST00000463577.2
ENST00000472723.1
ENST00000493439.1
ENST00000496460.5
CDS-3UTR CAA 90 bp GGACGTGGTGCCGCTGGAGCGGGAGGAAGGGCACCACTGCGTCTAGGAGGCGCTGACTCACGGTGCGGGTaGTCCAGCACCGCGCGGGAG +
Preference number: 5 (lower is better)
Translates to: GRGAAGAGGRAPLRLGGADSRCG*SSTARE
Trigger: CTCCCGCGCGGTGCTGGACAACCCGCACCGTGAGTC...AGCGCCTCCTAGACGCAGTGGTGCCCTTCCTCCCGCTCCAGCGGCACCACGTCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373281.8
ENST00000463577.2
ENST00000493439.1
CDS-3UTR CAA 90 bp GAGGATCTCCTCGCGGTCCCGCCGGCTGCGCCACGCCTCCAATGCCACCTGGTTAAGCCATGGTGCGGGTaGTCCAGCACCGCGCGGGAG +
Preference number: 5 (lower is better)
Translates to: EDLLAVPPAAPRLQCHLVKPWCG*SSTARE
Trigger: CTCCCGCGCGGTGCTGGACAACCCGCACCATGGCTT...AACCAGGTGGCATTGGAGGCGTGGCGCAGCCGGCGGGACCGCGAGGAGATCCTC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496460.5
CDS-3UTR CAA 90 bp CGGCTCCAGCTCCTGCAGGAGGATCTCCTCGCGGTCCCGCCGGCTGCGCCACGCAGGCCTGGGGGCATCTaGTCCATCTCATCGAAGAGG +
Preference number: 5 (lower is better)
Translates to: RLQLLQEDLLAVPPAAPRRPGGI*SISSKR
Trigger: CCTCTTCGATGAGATGGACAAGATGCCCCCAGGCCT...GCGTGGCGCAGCCGGCGGGACCGCGAGGAGATCCTCCTGCAGGAGCTGGAGCCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373281.8
ENST00000463577.2
ENST00000493439.1
ENST00000496460.5
CDS-3UTR CAA 90 bp TGGGGAAGGTGGCCGGGGCCAAGATGCTCTCGAGCCAGTTTAGAGGCCAGGGCCTTCACCACCAGCGCCTaGGCCAGATGCTGGCCGGCC +
Preference number: 5 (lower is better)
Translates to: WGRWPGPRCSRASLEARAFTTSA*ARCWPA
Trigger: GGCCGGCCAGCATCTGGCCAAGGCGCTGGTGGTGAA...GGCCCTGGCCTCTAAACTGGCTCGAGAGCATCTTGGCCCCGGCCACCTTCCCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000373284.10
CDS-3UTR CAA 90 bp GGCAAGGGTGGCAGACTGAGGAGGGAGCACCGCCACGAGCCACAGTCCCTGAGTAGCTGGGCCAGCTCGTaGAGCACGCAGTGCCGGACG +
Preference number: 5 (lower is better)
Translates to: GKGGRLRREHRHEPQSLSSWASS*STQCRT
Trigger: CGTCCGGCACTGCGTGCTCAACGAGCTGGCCCAGCT...ACTCAGGGACTGTGGCTCGTGGCGGTGCTCCCTCCTCAGTCTGCCACCCTTGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000373284.10
ENST00000463577.2
CDS-3UTR CAA 90 bp CCCTGGGGAAGGTGGCCGGGGCCAAGATGCTCTCGAGCCAGTTTAGAGGCCAGGAAGCCATGGTGCGGGTaGTCCAGCACCGCGCGGGAG +
Preference number: 5 (lower is better)
Translates to: PWGRWPGPRCSRASLEARKPWCG*SSTARE
Trigger: CTCCCGCGCGGTGCTGGACAACCCGCACCATGGCTT...CCTGGCCTCTAAACTGGCTCGAGAGCATCTTGGCCCCGGCCACCTTCCCCAGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373284.10
CDS-3UTR CAA 90 bp CAGTTTAGAGGCCAGGGCCCTTCCTGGCCATCTGTCCCGTGGCCTAGCCGACACAGCTGGGCCAGCTCGTaGAGCACGCAGTGCCGGACG +
Preference number: 5 (lower is better)
Translates to: QFRGQGPSWPSVPWPSRHSWASS*STQCRT
Trigger: CGTCCGGCACTGCGTGCTCAACGAGCTGGCCCAGCT...GTGTCGGCTAGGCCACGGGACAGATGGCCAGGAAGGGCCCTGGCCTCTAAACTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000373284.10
ENST00000463256.5
ENST00000463577.2
ENST00000496460.5
CDS-3UTR CAA 90 bp CCCTGGGGAAGGTGGCCGGGGCCAAGATGCTCTCGAGCCAGTTTAGAGGCCAGGCGGGAGGCCACGGTCTaGCAGCCGTTGGAGGAGAAG +
Preference number: 5 (lower is better)
Translates to: PWGRWPGPRCSRASLEARREATV*QPLEEK
Trigger: CTTCTCCTCCAACGGCTGCAAGACCGTGGCCTCCCG...CCTGGCCTCTAAACTGGCTCGAGAGCATCTTGGCCCCGGCCACCTTCCCCAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000373284.10
ENST00000463256.5
ENST00000463577.2
CDS-3UTR CAA 90 bp TCCTGCAGGAGGATCTCCTCGCGGTCCCGCCGGCTGCGCCACGCCTCCAATGCCTGCTTGCCACCCGTGTaGCTAAAACCATGGGGGACC +
Preference number: 5 (lower is better)
Translates to: SCRRISSRSRRLRHASNACLPPV*LKPWGT
Trigger: GGTCCCCCATGGTTTTAGCAACACGGGTGGCAAGCA...GGCATTGGAGGCGTGGCGCAGCCGGCGGGACCGCGAGGAGATCCTCCTGCAGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373281.8
ENST00000463577.2
CDS GCA 90 bp GGCCAGGCCATTCCGGGGAGGCCCAAGAACTTCCACCAAGGGTTCTaGTGGCTGAGGCCTCTCTCCAGGTTGGCAGGGCCTCCTGGACCT +
Preference number: 5 (lower is better)
Translates to: GQAIPGRPKNFHQGF*WLRPLSRLAGPPGP
Trigger: AGGTCCAGGAGGCCCTGCCAACCTGGAGAGAGGCCTCAGCCAGCAGAACCCTTGGTGGAAGTTCTTGGGCCTCCCCGGAATGGCCTGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472723.1
CDS-3UTR CAA 90 bp GGAAGGTGGCCGGGGCCAAGATGCTCTCGAGCCAGTTTAGAGGCCAGGGCCCTTCGGGAGGCCACGGTCTaGCAGCCGTTGGAGGAGAAG +
Preference number: 5 (lower is better)
Translates to: GRWPGPRCSRASLEARALREATV*QPLEEK
Trigger: CTTCTCCTCCAACGGCTGCAAGACCGTGGCCTCCCG...AAGGGCCCTGGCCTCTAAACTGGCTCGAGAGCATCTTGGCCCCGGCCACCTTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000373284.10
ENST00000463256.5
ENST00000463577.2
ENST00000496460.5
CDS TCA 90 bp CCATTCCGGGGAGGCCCAAGAACTTCCACCAAGGGTTCTGCTGGCTaGGGCCTCTCTCCAGGTTGGCAGGGCCTCCTGGACCTCAACGGG +
Preference number: 5 (lower is better)
Translates to: PFRGGPRTSTKGSAG*GLSPGWQGLLDLNG
Trigger: CCCGTTGAGGTCCAGGAGGCCCTGCCAACCTGGAGAGAGGCCTCAGCCAGCAGAACCCTTGGTGGAAGTTCTTGGGCCTCCCCGGAATGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472723.1
CDS-3UTR CAA 90 bp CCTGGCCATCTGTCCCGTGGCCTAGCCGACACTCCGTTCATCTCACTTGGTGCTTTCACCACCAGCGCCTaGGCCAGATGCTGGCCGGCC +
Preference number: 5 (lower is better)
Translates to: PGHLSRGLADTPFISLGAFTTSA*ARCWPA
Trigger: GGCCGGCCAGCATCTGGCCAAGGCGCTGGTGGTGAA...AGCACCAAGTGAGATGAACGGAGTGTCGGCTAGGCCACGGGACAGATGGCCAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000373284.10
CDS-3UTR CAA 90 bp GCTGCTGAGCCAGACTCACGGTGCGGGTTGTCCAGCACCGCGCGGGAGATGACCAGGCCTGGGGGCATCTaGTCCATCTCATCGAAGAGG +
Preference number: 5 (lower is better)
Translates to: AAEPDSRCGLSSTAREMTRPGGI*SISSKR
Trigger: CCTCTTCGATGAGATGGACAAGATGCCCCCAGGCCT...GGTCATCTCCCGCGCGGTGCTGGACAACCCGCACCGTGAGTCTGGCTCAGCAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373281.8
ENST00000463577.2
ENST00000493439.1
CDS-3UTR CAA 90 bp TCCTGGCCATCTGTCCCGTGGCCTAGCCGACACTCCGTTCATCTCACTTGGTGCAGCTGGGCCAGCTCGTaGAGCACGCAGTGCCGGACG +
Preference number: 5 (lower is better)
Translates to: SWPSVPWPSRHSVHLTWCSWASS*STQCRT
Trigger: CGTCCGGCACTGCGTGCTCAACGAGCTGGCCCAGCT...GCACCAAGTGAGATGAACGGAGTGTCGGCTAGGCCACGGGACAGATGGCCAGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000373284.10
ENST00000463256.5
ENST00000463577.2
ENST00000496460.5
CDS-3UTR CAA 90 bp GGGGCCGAGGACACCACTCAGAGAGTCAGAGGAAGAAGGCGATTCGGGAGGCCACGGGAGGCCACGGTCTaGCAGCCGTTGGAGGAGAAG +
Preference number: 5 (lower is better)
Translates to: GAEDTTQRVRGRRRFGRPREATV*QPLEEK
Trigger: CTTCTCCTCCAACGGCTGCAAGACCGTGGCCTCCCG...TGGCCTCCCGAATCGCCTTCTTCCTCTGACTCTCTGAGTGGTGTCCTCGGCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000463256.5
ENST00000463577.2
ENST00000496460.5
CDS-3UTR CAA 90 bp GAAAAATGCTGGCCTCAGTTCCCTCAGCCGCCTTCTGGGTGTAGGACTCAGGGGGACTCACGGTGCGGGTaGTCCAGCACCGCGCGGGAG +
Preference number: 5 (lower is better)
Translates to: EKCWPQFPQPPSGCRTQGDSRCG*SSTARE
Trigger: CTCCCGCGCGGTGCTGGACAACCCGCACCGTGAGTC...CCCCTGAGTCCTACACCCAGAAGGCGGCTGAGGGAACTGAGGCCAGCATTTTTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000373281.8
ENST00000463577.2
ENST00000493439.1
CDS CCA 90 bp CACCCAGGAGGAGCCCAGGAAAGGCCGCAGGACTTCCATCAGGCCTaGGGGCATCTTGTCCATCTCATCGAAGAGGAAGAGGGAGCGGCC +
Preference number: 5 (lower is better)
Translates to: HPGGAQERPQDFHQA*GHLVHLIEEEEGAA
Trigger: GGCCGCTCCCTCTTCCTCTTCGATGAGATGGACAAGATGCCCCCAGGCCTGATGGAAGTCCTGCGGCCTTTCCTGGGCTCCTCCTGGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000373284.10
ENST00000463256.5
ENST00000463577.2
ENST00000472723.1
ENST00000493439.1
ENST00000496460.5
CDS CCA 90 bp CAGGCCATTCCGGGGAGGCCCAAGAACTTCCACCAAGGGTTCTGCTaGCTGAGGCCTCTCTCCAGGTTGGCAGGGCCTCCTGGACCTCAA +
Preference number: 5 (lower is better)
Translates to: QAIPGRPKNFHQGFC*LRPLSRLAGPPGPQ
Trigger: TTGAGGTCCAGGAGGCCCTGCCAACCTGGAGAGAGGCCTCAGCCAGCAGAACCCTTGGTGGAAGTTCTTGGGCCTCCCCGGAATGGCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472723.1
CDS-3UTR CAA 90 bp GGGAAGGTGGCCGGGGCCAAGATGCTCTCGAGCCAGTTTAGAGGCCAGGGCCCTGGCAGTGAGGTTCCCTaGGACCCAGCTCTTCAGATC +
Preference number: 5 (lower is better)
Translates to: GKVAGAKMLSSQFRGQGPGSEVP*DPALQI
Trigger: GATCTGAAGAGCTGGGTCCAAGGGAACCTCACTGCC...AGGGCCCTGGCCTCTAAACTGGCTCGAGAGCATCTTGGCCCCGGCCACCTTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000373284.10
ENST00000463256.5
ENST00000463577.2
ENST00000496460.5
CDS-3UTR CAA 90 bp GGGAAGGTGGCCGGGGCCAAGATGCTCTCGAGCCAGTTTAGAGGCCAGGGCCCTAGGCCTGGGGGCATCTaGTCCATCTCATCGAAGAGG +
Preference number: 5 (lower is better)
Translates to: GKVAGAKMLSSQFRGQGPRPGGI*SISSKR
Trigger: CCTCTTCGATGAGATGGACAAGATGCCCCCAGGCCT...AGGGCCCTGGCCTCTAAACTGGCTCGAGAGCATCTTGGCCCCGGCCACCTTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000373284.10
ENST00000463256.5
ENST00000463577.2
ENST00000496460.5
CDS-3UTR CAA 90 bp CACCACTCAGAGAGTCAGAGGAAGAAGGCGATTCGGGAGGCCACGGTCTTGCAGAGCTGGGCCAGCTCGTaGAGCACGCAGTGCCGGACG +
Preference number: 5 (lower is better)
Translates to: HHSESQRKKAIREATVLQSWASS*STQCRT
Trigger: CGTCCGGCACTGCGTGCTCAACGAGCTGGCCCAGCT...CTGCAAGACCGTGGCCTCCCGAATCGCCTTCTTCCTCTGACTCTCTGAGTGGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000463256.5
ENST00000463577.2
ENST00000496460.5
CDS-3UTR CAA 90 bp AGGGAAGAAGGTGGTGCTGTCCAGCACAGCCTGGACAACCTCATCCCTTGGCTCAGCTGGGCCAGCTCGTaGAGCACGCAGTGCCGGACG +
Preference number: 5 (lower is better)
Translates to: REEGGAVQHSLDNLIPWLSWASS*STQCRT
Trigger: CGTCCGGCACTGCGTGCTCAACGAGCTGGCCCAGCT...GAGCCAAGGGATGAGGTTGTCCAGGCTGTGCTGGACAGCACCACCTTCTTCCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373281.8
ENST00000463256.5
ENST00000463577.2
ENST00000496460.5
CDS-3UTR CAA 90 bp GGTGCCGCTGGAGCGGGAGGAAGGGCACCACTGCGTCTAGGAGGCGCTCTTCCACTCCGTTCATCTCACTaGGTGCTCTGGGTTCCTGTG +
Preference number: 5 (lower is better)
Translates to: GAAGAGGRAPLRLGGALPLRSSH*VLWVPV
Trigger: CACAGGAACCCAGAGCACCAAGTGAGATGAACGGAG...TGGAAGAGCGCCTCCTAGACGCAGTGGTGCCCTTCCTCCCGCTCCAGCGGCACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373281.8
ENST00000463256.5
ENST00000463577.2
ENST00000496460.5
CDS-3UTR CAA 90 bp GGCAAGGGTGGCAGACTGAGGAGGGAGCACCGCCACGAGCCACAGTCCCTGAGTGGCCCAAGTGGCAGCTaGAGTCCCTCCATTTCTGGA +
Preference number: 5 (lower is better)
Translates to: GKGGRLRREHRHEPQSLSGPSGS*SPSISG
Trigger: TCCAGAAATGGAGGGACTCAAGCTGCCACTTGGGCC...ACTCAGGGACTGTGGCTCGTGGCGGTGCTCCCTCCTCAGTCTGCCACCCTTGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000373284.10
ENST00000463577.2
CDS-3UTR CAA 90 bp GGCCAGGGCCCTTCCTGGCCATCTGTCCCGTGGCCTAGCCGACACTCCGTTCATTCCAATGCCACCTGGTaGATCTGCTTGCCACCCGTG +
Preference number: 5 (lower is better)
Translates to: GQGPSWPSVPWPSRHSVHSNATW*ICLPPV
Trigger: CACGGGTGGCAAGCAGATCAACCAGGTGGCATTGGA...ATGAACGGAGTGTCGGCTAGGCCACGGGACAGATGGCCAGGAAGGGCCCTGGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373281.8
ENST00000373284.10
ENST00000463577.2
ENST00000496460.5
CDS-3UTR CAA 90 bp AAGCCATGGTGCGGGTTGTCCAGCACCGCGCGGGAGATGACCGGCTCCAGCTCCACCTGGTTGATCTGCTaGCCACCCGTGTTGCTGATG +
Preference number: 5 (lower is better)
Translates to: KPWCGLSSTAREMTGSSSTWLIC*PPVLLM
Trigger: CATCAGCAACACGGGTGGCAAGCAGATCAACCAGGT...GGAGCTGGAGCCGGTCATCTCCCGCGCGGTGCTGGACAACCCGCACCATGGCTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496460.5
CDS-3UTR CAA 90 bp AGGTGGCCGGGGCCAAGATGCTCTCGAGCCAGTTTAGAGGCCAGGGCCCTTCCTAGGCCTGGGGGCATCTaGTCCATCTCATCGAAGAGG +
Preference number: 5 (lower is better)
Translates to: RWPGPRCSRASLEARALPRPGGI*SISSKR
Trigger: CCTCTTCGATGAGATGGACAAGATGCCCCCAGGCCT...AGGAAGGGCCCTGGCCTCTAAACTGGCTCGAGAGCATCTTGGCCCCGGCCACCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000373284.10
ENST00000463256.5
ENST00000463577.2
ENST00000496460.5
CDS-3UTR CAA 90 bp TCAGAGGAAGAAGGCGATTCGGGAGGCCACGGTCTTGCAGCCGTTGGAGGAGAACGGGAGGCCACGGTCTaGCAGCCGTTGGAGGAGAAG +
Preference number: 5 (lower is better)
Translates to: SEEEGDSGGHGLAAVGGEREATV*QPLEEK
Trigger: CTTCTCCTCCAACGGCTGCAAGACCGTGGCCTCCCG...TTCTCCTCCAACGGCTGCAAGACCGTGGCCTCCCGAATCGCCTTCTTCCTCTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000463256.5
ENST00000463577.2
ENST00000496460.5
CDS-3UTR CAA 90 bp GGCAAGGGTGGCAGACTGAGGAGGGAGCACCGCCACGAGCCACAGTCCCTGAGTCTCCGTTCATCTCACTaGGTGCTCTGGGTTCCTGTG +
Preference number: 5 (lower is better)
Translates to: GKGGRLRREHRHEPQSLSLRSSH*VLWVPV
Trigger: CACAGGAACCCAGAGCACCAAGTGAGATGAACGGAG...ACTCAGGGACTGTGGCTCGTGGCGGTGCTCCCTCCTCAGTCTGCCACCCTTGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000373284.10
ENST00000463577.2
CDS-3UTR CAA 90 bp CCCTGGGGAAGGTGGCCGGGGCCAAGATGCTCTCGAGCCAGTTTAGAGGCCAGGAAGGCTCCACCTGGCTaGATATGGACACAGGGTGTG +
Preference number: 5 (lower is better)
Translates to: PWGRWPGPRCSRASLEARKAPPG*IWTQGV
Trigger: CACACCCTGTGTCCATATCAAGCCAGGTGGAGCCTT...CCTGGCCTCTAAACTGGCTCGAGAGCATCTTGGCCCCGGCCACCTTCCCCAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000373284.10
ENST00000463577.2
CDS-3UTR CAA 90 bp GGAAGGTGGCCGGGGCCAAGATGCTCTCGAGCCAGTTTAGAGGCCAGGGCCCTTGGCCCAAGTGGCAGCTaGAGTCCCTCCATTTCTGGA +
Preference number: 5 (lower is better)
Translates to: GRWPGPRCSRASLEARALGPSGS*SPSISG
Trigger: TCCAGAAATGGAGGGACTCAAGCTGCCACTTGGGCC...AAGGGCCCTGGCCTCTAAACTGGCTCGAGAGCATCTTGGCCCCGGCCACCTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000373284.10
ENST00000463577.2
CDS-3UTR CAA 90 bp GGCAAGGGTGGCAGACTGAGGAGGGAGCACCGCCACGAGCCACAGTCCCTGAGTACCTGGTTGATCTGCTaGCCACCCGTGTTGCTGATG +
Preference number: 5 (lower is better)
Translates to: GKGGRLRREHRHEPQSLSTWLIC*PPVLLM
Trigger: CATCAGCAACACGGGTGGCAAGCAGATCAACCAGGT...ACTCAGGGACTGTGGCTCGTGGCGGTGCTCCCTCCTCAGTCTGCCACCCTTGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373284.10
CDS-3UTR CAA 90 bp GCTGCTGAGCCAGACTCACGGTGCGGGTTGTCCAGCACCGCGCGGGAGATGACCTGCTTGCCACCCGTGTaGCTGATGAAGATGAAGATG +
Preference number: 5 (lower is better)
Translates to: AAEPDSRCGLSSTAREMTCLPPV*LMKMKM
Trigger: CATCTTCATCTTCATCAGCAACACGGGTGGCAAGCA...GGTCATCTCCCGCGCGGTGCTGGACAACCCGCACCGTGAGTCTGGCTCAGCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493439.1
CDS CCA 90 bp GAGCAGGTGACTCCCCTGTCTGGGCTCAGGACTTACTCCCTAGGGTaGCACCCCATGGTGAGAACAGTGGTCAAGGACGCATCCAGCCTA +
Preference number: 5 (lower is better)
Translates to: EQVTPLSGLRTYSLG*HPMVRTVVKDASSL
Trigger: TAGGCTGGATGCGTCCTTGACCACTGTTCTCACCATGGGGTGCCACCCTAGGGAGTAAGTCCTGAGCCCAGACAGGGGAGTCACCTGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472723.1
CDS-3UTR CAA 90 bp GTCAGAGGAAGAAGGCGATTCGGGAGGCCACGGTCTTGCAGCCGTTGGAGGAGAAGGCCTGGGGGCATCTaGTCCATCTCATCGAAGAGG +
Preference number: 5 (lower is better)
Translates to: VRGRRRFGRPRSCSRWRRRPGGI*SISSKR
Trigger: CCTCTTCGATGAGATGGACAAGATGCCCCCAGGCCT...TCTCCTCCAACGGCTGCAAGACCGTGGCCTCCCGAATCGCCTTCTTCCTCTGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000463256.5
ENST00000463577.2
ENST00000496460.5
CDS-3UTR CAA 90 bp TCCTGGCCATCTGTCCCGTGGCCTAGCCGACACTCCGTTCATCTCACTTGGTGCAGGCCTGGGGGCATCTaGTCCATCTCATCGAAGAGG +
Preference number: 5 (lower is better)
Translates to: SWPSVPWPSRHSVHLTWCRPGGI*SISSKR
Trigger: CCTCTTCGATGAGATGGACAAGATGCCCCCAGGCCT...GCACCAAGTGAGATGAACGGAGTGTCGGCTAGGCCACGGGACAGATGGCCAGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000373284.10
ENST00000463256.5
ENST00000463577.2
ENST00000496460.5
CDS-3UTR CAA 90 bp CCCAAGTGGCAGCTTGAGTCCCTCCATTTCTGGAAACTGAGAAGGCTCCACCTGCGGGAGGCCACGGTCTaGCAGCCGTTGGAGGAGAAG +
Preference number: 5 (lower is better)
Translates to: PKWQLESLHFWKLRRLHLREATV*QPLEEK
Trigger: CTTCTCCTCCAACGGCTGCAAGACCGTGGCCTCCCG...CAGGTGGAGCCTTCTCAGTTTCCAGAAATGGAGGGACTCAAGCTGCCACTTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000373284.10
ENST00000463577.2
CDS-3UTR CAA 90 bp AGGGCCCTTCCTGGCCATCTGTCCCGTGGCCTAGCCGACACTCCGTTCATCTCACTCCGTTCATCTCACTaGGTGCTCTGGGTTCCTGTG +
Preference number: 5 (lower is better)
Translates to: RALPGHLSRGLADTPFISLRSSH*VLWVPV
Trigger: CACAGGAACCCAGAGCACCAAGTGAGATGAACGGAG...TGAGATGAACGGAGTGTCGGCTAGGCCACGGGACAGATGGCCAGGAAGGGCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000373284.10
ENST00000463256.5
ENST00000463577.2
ENST00000496460.5
CDS-3UTR CAA 90 bp GCCCTTCCTGGCCATCTGTCCCGTGGCCTAGCCGACACTCCGTTCATCTCACTTTCCAATGCCACCTGGTaGATCTGCTTGCCACCCGTG +
Preference number: 5 (lower is better)
Translates to: ALPGHLSRGLADTPFISLSNATW*ICLPPV
Trigger: CACGGGTGGCAAGCAGATCAACCAGGTGGCATTGGA...AAGTGAGATGAACGGAGTGTCGGCTAGGCCACGGGACAGATGGCCAGGAAGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373281.8
ENST00000373284.10
ENST00000463577.2
ENST00000496460.5
CDS GCA 90 bp TCAAAGTACTCCCTGCCAGGTAGAATGACACCTTCCCAAGTTCTGTaGAGGATGGGTCCTGAGGGCTGGGGCTGCAGCCGTGTGTGGCCT +
Preference number: 5 (lower is better)
Translates to: SKYSLPGRMTPSQVL*RMGPEGWGCSRVWP
Trigger: AGGCCACACACGGCTGCAGCCCCAGCCCTCAGGACCCATCCTGCACAGAACTTGGGAAGGTGTCATTCTACCTGGCAGGGAGTACTTTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472723.1
CDS-3UTR CAA 90 bp AGCTGCTCGTCTTCAGGGAAGAAGGTGGTGCTGTCCAGCACAGCCTGGACAACCGGCAGTGAGGTTCCCTaGGACCCAGCTCTTCAGATC +
Preference number: 5 (lower is better)
Translates to: SCSSSGKKVVLSSTAWTTGSEVP*DPALQI
Trigger: GATCTGAAGAGCTGGGTCCAAGGGAACCTCACTGCC...GGTTGTCCAGGCTGTGCTGGACAGCACCACCTTCTTCCCTGAAGACGAGCAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000463256.5
ENST00000463577.2
ENST00000496460.5
CDS-3UTR CAA 90 bp GTCAGAGGAAGAAGGCGATTCGGGAGGCCACGGTCTTGCAGCCGTTGGAGGAGACTCCGTTCATCTCACTaGGTGCTCTGGGTTCCTGTG +
Preference number: 5 (lower is better)
Translates to: VRGRRRFGRPRSCSRWRRLRSSH*VLWVPV
Trigger: CACAGGAACCCAGAGCACCAAGTGAGATGAACGGAG...TCTCCTCCAACGGCTGCAAGACCGTGGCCTCCCGAATCGCCTTCTTCCTCTGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000463256.5
ENST00000463577.2
ENST00000496460.5
CDS-3UTR CAA 90 bp CCATCTGTCCCGTGGCCTAGCCGACACTCCGTTCATCTCACTTGGTGCTCTGGGAAGGCTCCACCTGGCTaGATATGGACACAGGGTGTG +
Preference number: 5 (lower is better)
Translates to: PSVPWPSRHSVHLTWCSGKAPPG*IWTQGV
Trigger: CACACCCTGTGTCCATATCAAGCCAGGTGGAGCCTT...CCCAGAGCACCAAGTGAGATGAACGGAGTGTCGGCTAGGCCACGGGACAGATGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000373284.10
ENST00000463577.2
CDS-3UTR CAA 90 bp CAGAGAGTCAGAGGAAGAAGGCGATTCGGGAGGCCACGGTCTTGCAGCCGTTGGAAGGCTCCACCTGGCTaGATATGGACACAGGGTGTG +
Preference number: 5 (lower is better)
Translates to: QRVRGRRRFGRPRSCSRWKAPPG*IWTQGV
Trigger: CACACCCTGTGTCCATATCAAGCCAGGTGGAGCCTT...CCAACGGCTGCAAGACCGTGGCCTCCCGAATCGCCTTCTTCCTCTGACTCTCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000463577.2
CDS-3UTR CAA 90 bp GGAGAAGAGCTGCTCGTCTTCAGGGAAGAAGGTGGTGCTGTCCAGCACAGCCTGGGCCCAAGTGGCAGCTaGAGTCCCTCCATTTCTGGA +
Preference number: 5 (lower is better)
Translates to: GEELLVFREEGGAVQHSLGPSGS*SPSISG
Trigger: TCCAGAAATGGAGGGACTCAAGCTGCCACTTGGGCC...CAGGCTGTGCTGGACAGCACCACCTTCTTCCCTGAAGACGAGCAGCTCTTCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000463577.2
CDS-3UTR CAA 90 bp AAGAAGGTGGTGCTGTCCAGCACAGCCTGGACAACCTCATCCCTTGGCTCCAGGTGCTTGCCACCCGTGTaGCTAAAACCATGGGGGACC +
Preference number: 5 (lower is better)
Translates to: KKVVLSSTAWTTSSLGSRCLPPV*LKPWGT
Trigger: GGTCCCCCATGGTTTTAGCAACACGGGTGGCAAGCA...CCTGGAGCCAAGGGATGAGGTTGTCCAGGCTGTGCTGGACAGCACCACCTTCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373281.8
ENST00000463577.2
CDS-3UTR CAA 90 bp GGTGGCAGACTGAGGAGGGAGCACCGCCACGAGCCACAGTCCCTGAGTTATAATTCCAATGCCACCTGGTaGATCTGCTTGCCACCCGTG +
Preference number: 5 (lower is better)
Translates to: GGRLRREHRHEPQSLSYNSNATW*ICLPPV
Trigger: CACGGGTGGCAAGCAGATCAACCAGGTGGCATTGGA...ATTATAACTCAGGGACTGTGGCTCGTGGCGGTGCTCCCTCCTCAGTCTGCCACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373281.8
ENST00000373284.10
ENST00000463577.2
CDS-3UTR CAA 90 bp GCTGCTCGTCTTCAGGGAAGAAGGTGGTGCTGTCCAGCACAGCCTGGACAACCTTCCAATGCCACCTGGTaGATCTGCTTGCCACCCGTG +
Preference number: 5 (lower is better)
Translates to: AARLQGRRWCCPAQPGQPSNATW*ICLPPV
Trigger: CACGGGTGGCAAGCAGATCAACCAGGTGGCATTGGA...AGGTTGTCCAGGCTGTGCTGGACAGCACCACCTTCTTCCCTGAAGACGAGCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373281.8
ENST00000463577.2
ENST00000496460.5
CDS TCA 90 bp TCTTGTCCATCTCATCGAAGAGGAAGAGGGAGCGGCCACAGGCAGTaGGGTTCCCTTGGACCCAGCTCTTCAGATCCTTCCGGCAAGTCG +
Preference number: 5 (lower is better)
Translates to: SCPSHRRGRGSGHRQ*GSLGPSSSDPSGKS
Trigger: CGACTTGCCGGAAGGATCTGAAGAGCTGGGTCCAAGGGAACCTCACTGCCTGTGGCCGCTCCCTCTTCCTCTTCGATGAGATGGACAAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000463256.5
ENST00000463577.2
ENST00000493439.1
ENST00000496460.5
CDS-3UTR CAA 90 bp TCTAAAACCAGGCCCAAGTGGCAGCTTGAGTCCCTCCATTTCTGGAAACTGAGATTCACCACCAGCGCCTaGGCCAGATGCTGGCCGGCC +
Preference number: 5 (lower is better)
Translates to: SKTRPKWQLESLHFWKLRFTTSA*ARCWPA
Trigger: GGCCGGCCAGCATCTGGCCAAGGCGCTGGTGGTGAA...TCTCAGTTTCCAGAAATGGAGGGACTCAAGCTGCCACTTGGGCCTGGTTTTAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000373284.10
CDS-3UTR CAA 90 bp GGGGCATCATTATTGGCCCCGCTGTTCAGAAGCAGAGACAGAGGCTCAGAGAGGAGGCCTGGGGGCATCTaGTCCATCTCATCGAAGAGG +
Preference number: 5 (lower is better)
Translates to: GASLLAPLFRSRDRGSERRPGGI*SISSKR
Trigger: CCTCTTCGATGAGATGGACAAGATGCCCCCAGGCCT...CCTCTCTGAGCCTCTGTCTCTGCTTCTGAACAGCGGGGCCAATAATGATGCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000373281.8
ENST00000463577.2
CDS-3UTR CAA 90 bp CTTGGTGCTCTGGGTTCCTGTGACAGAGGCCCCTGGCCTTTCCTGCATGGCCTGTGCTTGCCACCCGTGTaGCTGATGAAGATGAAGATG +
Preference number: 5 (lower is better)
Translates to: LGALGSCDRGPWPFLHGLCLPPV*LMKMKM
Trigger: CATCTTCATCTTCATCAGCAACACGGGTGGCAAGCA...CAGGCCATGCAGGAAAGGCCAGGGGCCTCTGTCACAGGAACCCAGAGCACCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373284.10
ENST00000496460.5
CDS-3UTR CAA 90 bp GGCACCACTGCGTCTAGGAGGCGCTCTTCCATGATGCCCGAGTTTGAGAAGCCAACCTGGTTGATCTGCTaGCCACCCGTGTTGCTGATG +
Preference number: 5 (lower is better)
Translates to: GTTASRRRSSMMPEFEKPTWLIC*PPVLLM
Trigger: CATCAGCAACACGGGTGGCAAGCAGATCAACCAGGT...TGGCTTCTCAAACTCGGGCATCATGGAAGAGCGCCTCCTAGACGCAGTGGTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000493439.1
ENST00000496460.5
CDS TCA 90 bp TCTTGTCCATCTCATCGAAGAGGAAGAGGGAGCGGCCACAGGCAGTaGGGTTCCCTTGGACCCAGCTCTTCAGATCCTTCTGTAGGGGAG +
Preference number: 5 (lower is better)
Translates to: SCPSHRRGRGSGHRQ*GSLGPSSSDPSVGE
Trigger: CTCCCCTACAGAAGGATCTGAAGAGCTGGGTCCAAGGGAACCTCACTGCCTGTGGCCGCTCCCTCTTCCTCTTCGATGAGATGGACAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472723.1
CDS-3UTR CAA 90 bp AGGAGAAGAGCTGCTCGTCTTCAGGGAAGAAGGTGGTGCTGTCCAGCACAGCCTCTCCGTTCATCTCACTaGGTGCTCTGGGTTCCTGTG +
Preference number: 5 (lower is better)
Translates to: RRRAARLQGRRWCCPAQPLRSSH*VLWVPV
Trigger: CACAGGAACCCAGAGCACCAAGTGAGATGAACGGAG...AGGCTGTGCTGGACAGCACCACCTTCTTCCCTGAAGACGAGCAGCTCTTCTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000463256.5
ENST00000463577.2
ENST00000496460.5
CDS-3UTR CAA 90 bp AGACTGAGGAGGGAGCACCGCCACGAGCCACAGTCCCTGAGTTATAATTCACAGGGCCCAAGTGGCAGCTaGAGTCCCTCCATTTCTGGA +
Preference number: 5 (lower is better)
Translates to: RLRREHRHEPQSLSYNSQGPSGS*SPSISG
Trigger: TCCAGAAATGGAGGGACTCAAGCTGCCACTTGGGCC...CTGTGAATTATAACTCAGGGACTGTGGCTCGTGGCGGTGCTCCCTCCTCAGTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000373284.10
ENST00000463577.2
CDS TCA 90 bp TCTTGTCCATCTCATCGAAGAGGAAGAGGGAGCGGCCACAGGCAGTaGGGTTCCCTTGGACCCAGCTCTTCAGATCCTTCTTGTAGCGCT +
Preference number: 5 (lower is better)
Translates to: SCPSHRRGRGSGHRQ*GSLGPSSSDPSCSA
Trigger: AGCGCTACAAGAAGGATCTGAAGAGCTGGGTCCAAGGGAACCTCACTGCCTGTGGCCGCTCCCTCTTCCTCTTCGATGAGATGGACAAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000373284.10
CDS CCA 90 bp TCCTTACGTTTGTCCAAGCTGCCTATGCACATGGCACGCAAACCTTaGGGTCTGTGGCGGAAAAGAGCCACCTTCGGGCCTGATTCAGCT +
Preference number: 5 (lower is better)
Translates to: SLRLSKLPMHMARKP*GLWRKRATFGPDSA
Trigger: AGCTGAATCAGGCCCGAAGGTGGCTCTTTTCCGCCACAGACCCCAAGGTTTGCGTGCCATGTGCATAGGCAGCTTGGACAAACGTAAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472723.1
CDS-3UTR CAA 90 bp GCTGCTCGTCTTCAGGGAAGAAGGTGGTGCTGTCCAGCACAGCCTGGACAACCTACCTGGTTGATCTGCTaGCCACCCGTGTTGCTAAAA +
Preference number: 5 (lower is better)
Translates to: AARLQGRRWCCPAQPGQPTWLIC*PPVLLK
Trigger: TTTTAGCAACACGGGTGGCAAGCAGATCAACCAGGT...AGGTTGTCCAGGCTGTGCTGGACAGCACCACCTTCTTCCCTGAAGACGAGCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373281.8
ENST00000463577.2
CDS-3UTR CAA 90 bp GCCACCTGGTTGATCTGCTTGCCACCCGTGTTGCTGATGAAGATGAAGATGGCTTCCAATGCCACCTGGTaGATCTGCTTGCCACCCGTG +
Preference number: 5 (lower is better)
Translates to: ATWLICLPPVLLMKMKMASNATW*ICLPPV
Trigger: CACGGGTGGCAAGCAGATCAACCAGGTGGCATTGGA...AGCCATCTTCATCTTCATCAGCAACACGGGTGGCAAGCAGATCAACCAGGTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000493439.1
ENST00000496460.5
CDS TCA 90 bp TTCCTTACTGCCCCAAGGAATCAAAGTACTCCCTGCCAGGTAGAATaGCACCTTCCCAAGTTCTGTGCAGGATGGGTCCTGAGGGCTGGG +
Preference number: 5 (lower is better)
Translates to: FLTAPRNQSTPCQVE*HLPKFCAGWVLRAG
Trigger: CCCAGCCCTCAGGACCCATCCTGCACAGAACTTGGGAAGGTGTCATTCTACCTGGCAGGGAGTACTTTGATTCCTTGGGGCAGTAAGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472723.1
CDS-3UTR CAA 90 bp AAGTGGCAGCTTGAGTCCCTCCATTTCTGGAAACTGAGAAGGCTCCACCTGGCTAAGGCTCCACCTGGCTaGATATGGACACAGGGTGTG +
Preference number: 5 (lower is better)
Translates to: KWQLESLHFWKLRRLHLAKAPPG*IWTQGV
Trigger: CACACCCTGTGTCCATATCAAGCCAGGTGGAGCCTT...AGCCAGGTGGAGCCTTCTCAGTTTCCAGAAATGGAGGGACTCAAGCTGCCACTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000373284.10
ENST00000463577.2
CDS-3UTR CAA 90 bp AAATTAAAAACATCTAAAACCAGGCCCAAGTGGCAGCTTGAGTCCCTCCATTTCGACTCACGGTGCGGGTaGTCCAGCACCGCGCGGGAG +
Preference number: 5 (lower is better)
Translates to: KLKTSKTRPKWQLESLHFDSRCG*SSTARE
Trigger: CTCCCGCGCGGTGCTGGACAACCCGCACCGTGAGTC...GAAATGGAGGGACTCAAGCTGCCACTTGGGCCTGGTTTTAGATGTTTTTAATTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373281.8
ENST00000463577.2
CDS CCA 90 bp ATCCCACCGAGGCAGAGGTTCAAGGAGAACATCATGTCTGGAACCTaGTCTGGGACTCCTGTGTCCTTACGTTTGTCCAAGCTGCCTATG +
Preference number: 5 (lower is better)
Translates to: IPPRQRFKENIMSGT*SGTPVSLRLSKLPM
Trigger: CATAGGCAGCTTGGACAAACGTAAGGACACAGGAGTCCCAGACCAGGTTCCAGACATGATGTTCTCCTTGAACCTCTGCCTCGGTGGGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472723.1
CDS-3UTR CAA 90 bp AAATTAAAAACATCTAAAACCAGGCCCAAGTGGCAGCTTGAGTCCCTCCATTTCAGCTGGGCCAGCTCGTaGAGCACGCAGTGCCGGACG +
Preference number: 5 (lower is better)
Translates to: KLKTSKTRPKWQLESLHFSWASS*STQCRT
Trigger: CGTCCGGCACTGCGTGCTCAACGAGCTGGCCCAGCT...GAAATGGAGGGACTCAAGCTGCCACTTGGGCCTGGTTTTAGATGTTTTTAATTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000373284.10
ENST00000463577.2
CDS-3UTR CAA 90 bp ACCAGGCCCAAGTGGCAGCTTGAGTCCCTCCATTTCTGGAAACTGAGAAGGCTCACCTGGTTGATCTGCTaGCCACCCGTGTTGCTAAAA +
Preference number: 5 (lower is better)
Translates to: TRPKWQLESLHFWKLRRLTWLIC*PPVLLK
Trigger: TTTTAGCAACACGGGTGGCAAGCAGATCAACCAGGT...GAGCCTTCTCAGTTTCCAGAAATGGAGGGACTCAAGCTGCCACTTGGGCCTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373281.8
ENST00000463577.2
CDS-3UTR CAA 90 bp CCCAAGTGGCAGCTTGAGTCCCTCCATTTCTGGAAACTGAGAAGGCTCCACCTGTGCTTGCCACCCGTGTaGCTGATGAAGATGAAGATG +
Preference number: 5 (lower is better)
Translates to: PKWQLESLHFWKLRRLHLCLPPV*LMKMKM
Trigger: CATCTTCATCTTCATCAGCAACACGGGTGGCAAGCA...CAGGTGGAGCCTTCTCAGTTTCCAGAAATGGAGGGACTCAAGCTGCCACTTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373284.10
CDS CCA 90 bp ACCGAGGCAGAGGTTCAAGGAGAACATCATGTCTGGAACCTGGTCTaGGACTCCTGTGTCCTTACGTTTGTCCAAGCTGCCTATGCACAT +
Preference number: 5 (lower is better)
Translates to: TEAEVQGEHHVWNLV*DSCVLTFVQAAYAH
Trigger: ATGTGCATAGGCAGCTTGGACAAACGTAAGGACACAGGAGTCCCAGACCAGGTTCCAGACATGATGTTCTCCTTGAACCTCTGCCTCGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472723.1
CDS-3UTR CAA 90 bp AAATTAAAAACATCTAAAACCAGGCCCAAGTGGCAGCTTGAGTCCCTCCATTTCCGGGAGGCCACGGTCTaGCAGCCGTTGGAGGAGAAG +
Preference number: 5 (lower is better)
Translates to: KLKTSKTRPKWQLESLHFREATV*QPLEEK
Trigger: CTTCTCCTCCAACGGCTGCAAGACCGTGGCCTCCCG...GAAATGGAGGGACTCAAGCTGCCACTTGGGCCTGGTTTTAGATGTTTTTAATTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000373284.10
ENST00000463577.2
CDS GCA 90 bp TGGTATAATCTCATGTCCCTCACAACAACCCTGGCATGTAGGTACTaGCAGGGTTCCTTACTGCCCCAAGGAATCAAAGTACTCCCTGCC +
Preference number: 5 (lower is better)
Translates to: WYNLMSLTTTLACRY*QGSLLPQGIKVLPA
Trigger: GGCAGGGAGTACTTTGATTCCTTGGGGCAGTAAGGAACCCTGGCAGTACCTACATGCCAGGGTTGTTGTGAGGGACATGAGATTATACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472723.1
CDS-3UTR CAA 90 bp GAACTCTGTTCCTATTTTTCCCAGGCCTGTGTCCTCCTCACCACAAAAGAGGGAAAGAGGGAAAACTTCTaGACCTGGCAGGGCTTCCAC +
Preference number: 5 (lower is better)
Translates to: ELCSYFSQACVLLTTKEGKRENF*TWQGFH
Trigger: GTGGAAGCCCTGCCAGGTCAAGAAGTTTTCCCTCTT...TCCCTCTTTTGTGGTGAGGAGGACACAGGCCTGGGAAAAATAGGAACAGAGTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000373281.8
ENST00000463577.2
CDS CCA 90 bp AATGATATCTGCAATGGTATAATCTCATGTCCCTCACAACAACCCTaGCATGTAGGTACTGCCAGGGTTCCTTACTGCCCCAAGGAATCA +
Preference number: 5 (lower is better)
Translates to: NDICNGIISCPSQQP*HVGTARVPYCPKES
Trigger: TGATTCCTTGGGGCAGTAAGGAACCCTGGCAGTACCTACATGCCAGGGTTGTTGTGAGGGACATGAGATTATACCATTGCAGATATCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472723.1
CDS GCA 90 bp CAGTGCAGATTATCTGACAAACATAGGTGCTCCATAAATGATATCTaGAATGGTATAATCTCATGTCCCTCACAACAACCCTGGCATGTA +
Preference number: 5 (lower is better)
Translates to: QCRLSDKHRCSINDI*NGIISCPSQQPWHV
Trigger: TACATGCCAGGGTTGTTGTGAGGGACATGAGATTATACCATTGCAGATATCATTTATGGAGCACCTATGTTTGTCAGATAATCTGCACTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472723.1
CDS TCA 72 bp AGGGCCGGCAGCCGCGCGTCGCAGCCGCCATCCGGGTaGGGCCCGAGCTCGTTGTGGGGCAGTCAACTGCCT +
Preference number: 6 (lower is better)
Translates to: RAGSRASQPPSG*GPSSLWGSQLP
Trigger: AGGCAGTTGACTGCCCCACAACGAGCTCGGGCCTCACCCGGATGGCGGCTGCGACGCGCGGCTGCCGGCCCT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496460.5
CDS TCA 72 bp ACCAGCGCCTTGGCCAGATGCTGGCCGGCCAGGTGCTaGGCCAGGTCACACTCCAGACCCGGCAAGTCGGGC +
Preference number: 6 (lower is better)
Translates to: TSALARCWPARC*ARSHSRPGKSG
Trigger: GCCCGACTTGCCGGGTCTGGAGTGTGACCTGGCTCAGCACCTGGCCGGCCAGCATCTGGCCAAGGCGCTGGT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000373284.10
CDS GCA 72 bp AGTGGAGGACGGGAGAAAAGTGGTGCACGCGGGGGCTaGGGAGGCCGCCCTGGAAGAGGTAGTGCGCCAGCA +
Preference number: 6 (lower is better)
Translates to: SGGREKSGARGG*GGRPGRGSAPA
Trigger: TGCTGGCGCACTACCTCTTCCAGGGCGGCCTCCGCAGCCCCCGCGTGCACCACTTTTCTCCCGTCCTCCACT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000373284.10
ENST00000472723.1
CDS TCA 72 bp GGCCGCCCTGGAAGAGGTAGTGCGCCAGCAGGGAGCTaGCATAGGATTTGCCGGTGCCGGTCCAGCCGTGCA +
Preference number: 6 (lower is better)
Translates to: GRPGRGSAPAGS*HRICRCRSSRA
Trigger: TGCACGGCTGGACCGGCACCGGCAAATCCTATGTCAGCTCCCTGCTGGCGCACTACCTCTTCCAGGGCGGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000373284.10
ENST00000472723.1
CDS TCA 72 bp ACCAGCGCCTTGGCCAGATGCTGGCCGGCCAGGTGCTaGGCCAGGTCACACTCCAGACCTAGGGCCACAGGA +
Preference number: 6 (lower is better)
Translates to: TSALARCWPARC*ARSHSRPRATG
Trigger: TCCTGTGGCCCTAGGTCTGGAGTGTGACCTGGCTCAGCACCTGGCCGGCCAGCATCTGGCCAAGGCGCTGGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472723.1
CDS CCA 72 bp GCACAAAGGCCTTCAGCGCCTTCACCACCAGCGCCTTaGCCAGATGCTGGCCGGCCAGGTGCTGAGCCAGGT +
Preference number: 6 (lower is better)
Translates to: AQRPSAPSPPAP*PDAGRPGAEPG
Trigger: ACCTGGCTCAGCACCTGGCCGGCCAGCATCTGGCCAAGGCGCTGGTGGTGAAGGCGCTGAAGGCCTTTGTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000373284.10
ENST00000472723.1
CDS TCA 72 bp GGAGGCCCAAGAACTTCCACCAAGGGTTCTGCTGGCTaGGGCCTCTCTCCAGGTTGGCAGGGCCTCCTGGAC +
Preference number: 6 (lower is better)
Translates to: GGPRTSTKGSAG*GLSPGWQGLLD
Trigger: GTCCAGGAGGCCCTGCCAACCTGGAGAGAGGCCTCAGCCAGCAGAACCCTTGGTGGAAGTTCTTGGGCCTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472723.1
CDS CAA 90 bp GGCCTGATTCAGCTCGGCAGCGCCCCCACCAGGCGGTCCTCTAGATaGCACTCAGCTCTAAATGCGAGCTGTCAACGGGGTCAGCCGCAG +
Preference number: 6 (lower is better)
Translates to: GLIQLGSAPTRRSSR*HSALNASCQRGQPQ
Trigger: CTGCGGCTGACCCCGTTGACAGCTCGCATTTAGAGCTGAGTGCAATCTAGAGGACCGCCTGGTGGGGGCGCTGCCGAGCTGAATCAGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000472723.1
CDS CAA 90 bp GAGCCCAGGAAAGGCCGCAGGACTTCCATCAGGCCTGGGGGCATCTaGTCCATCTCATCGAAGAGGAAGAGGGAGCGGCCACAGGCAGTG +
Preference number: 6 (lower is better)
Translates to: EPRKGRRTSIRPGGI*SISSKRKRERPQAV
Trigger: CACTGCCTGTGGCCGCTCCCTCTTCCTCTTCGATGAGATGGACAAGATGCCCCCAGGCCTGATGGAAGTCCTGCGGCCTTTCCTGGGCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000373284.10
ENST00000463256.5
ENST00000463577.2
ENST00000472723.1
ENST00000493439.1
ENST00000496460.5
CDS CAA 72 bp CAGCTCGGCAGCGCCCCCACCAGGCGGTCCTCTAGATaGCACTCAGCTCTAAATGCGAGCTGTCAACGGGGT +
Preference number: 6 (lower is better)
Translates to: QLGSAPTRRSSR*HSALNASCQRG
Trigger: ACCCCGTTGACAGCTCGCATTTAGAGCTGAGTGCAATCTAGAGGACCGCCTGGTGGGGGCGCTGCCGAGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000472723.1
CDS TCA 72 bp AGGTCACACTCCAGACCTAGGGCCACAGGAGGATGGTaGGGACACATCCCACCGAGGCAGAGGTTCAAGGAG +
Preference number: 6 (lower is better)
Translates to: RSHSRPRATGGW*GHIPPRQRFKE
Trigger: CTCCTTGAACCTCTGCCTCGGTGGGATGTGTCCTCACCATCCTCCTGTGGCCCTAGGTCTGGAGTGTGACCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472723.1
CDS CCA 72 bp GGAGCCCAGGAAAGGCCGCAGGACTTCCATCAGGCCTaGGGGCATCTTGTCCATCTCATCGAAGAGGAAGAG +
Preference number: 6 (lower is better)
Translates to: GAQERPQDFHQA*GHLVHLIEEEE
Trigger: CTCTTCCTCTTCGATGAGATGGACAAGATGCCCCCAGGCCTGATGGAAGTCCTGCGGCCTTTCCTGGGCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000373284.10
ENST00000463256.5
ENST00000463577.2
ENST00000472723.1
ENST00000493439.1
ENST00000496460.5
CDS CCA 72 bp ACTCCCCTGTCTGGGCTCAGGACTTACTCCCTAGGGTaGCACCCCATGGTGAGAACAGTGGTCAAGGACGCA +
Preference number: 6 (lower is better)
Translates to: TPLSGLRTYSLG*HPMVRTVVKDA
Trigger: TGCGTCCTTGACCACTGTTCTCACCATGGGGTGCCACCCTAGGGAGTAAGTCCTGAGCCCAGACAGGGGAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472723.1
CDS CAA 72 bp AAAGGCCGCAGGACTTCCATCAGGCCTGGGGGCATCTaGTCCATCTCATCGAAGAGGAAGAGGGAGCGGCCA +
Preference number: 6 (lower is better)
Translates to: KGRRTSIRPGGI*SISSKRKRERP
Trigger: TGGCCGCTCCCTCTTCCTCTTCGATGAGATGGACAAGATGCCCCCAGGCCTGATGGAAGTCCTGCGGCCTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000336067.10
ENST00000373281.8
ENST00000373284.10
ENST00000463256.5
ENST00000463577.2
ENST00000472723.1
ENST00000493439.1
ENST00000496460.5
CDS CCA 72 bp TTGTCCAAGCTGCCTATGCACATGGCACGCAAACCTTaGGGTCTGTGGCGGAAAAGAGCCACCTTCGGGCCT +
Preference number: 6 (lower is better)
Translates to: LSKLPMHMARKP*GLWRKRATFGP
Trigger: AGGCCCGAAGGTGGCTCTTTTCCGCCACAGACCCCAAGGTTTGCGTGCCATGTGCATAGGCAGCTTGGACAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472723.1
CDS CAA 72 bp TTTGTCCAAGCTGCCTATGCACATGGCACGCAAACCTaGGGGTCTGTGGCGGAAAAGAGCCACCTTCGGGCC +
Preference number: 6 (lower is better)
Translates to: FVQAAYAHGTQT*GSVAEKSHLRA
Trigger: GGCCCGAAGGTGGCTCTTTTCCGCCACAGACCCCAAGGTTTGCGTGCCATGTGCATAGGCAGCTTGGACAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472723.1
CDS GCA 72 bp GGACTCCTGTGTCCTTACGTTTGTCCAAGCTGCCTATaGACATGGCACGCAAACCTTGGGGTCTGTGGCGGA +
Preference number: 6 (lower is better)
Translates to: GLLCPYVCPSCL*TWHANLGVCGG
Trigger: TCCGCCACAGACCCCAAGGTTTGCGTGCCATGTGCATAGGCAGCTTGGACAAACGTAAGGACACAGGAGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472723.1
CDS GCA 72 bp GGTCTGGGACTCCTGTGTCCTTACGTTTGTCCAAGCTaGCTATGCACATGGCACGCAAACCTTGGGGTCTGT +
Preference number: 6 (lower is better)
Translates to: GLGLLCPYVCPS*LCTWHANLGVC
Trigger: ACAGACCCCAAGGTTTGCGTGCCATGTGCATAGGCAGCTTGGACAAACGTAAGGACACAGGAGTCCCAGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472723.1
CDS CAA 72 bp TCTGGAACCTGGTCTGGGACTCCTGTGTCCTTACGTTaGTCCAAGCTGCCTATGCACATGGCACGCAAACCT +
Preference number: 6 (lower is better)
Translates to: SGTWSGTPVSLR*SKLPMHMARKP
Trigger: AGGTTTGCGTGCCATGTGCATAGGCAGCTTGGACAAACGTAAGGACACAGGAGTCCCAGACCAGGTTCCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472723.1
CDS CAA 90 bp AACATCATGTCTGGAACCTGGTCTGGGACTCCTGTGTCCTTACGTTaGTCCAAGCTGCCTATGCACATGGCACGCAAACCTTGGGGTCTG +
Preference number: 6 (lower is better)
Translates to: NIMSGTWSGTPVSLR*SKLPMHMARKPWGL
Trigger: CAGACCCCAAGGTTTGCGTGCCATGTGCATAGGCAGCTTGGACAAACGTAAGGACACAGGAGTCCCAGACCAGGTTCCAGACATGATGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472723.1
CDS CCA 72 bp GAGGTTCAAGGAGAACATCATGTCTGGAACCTGGTCTaGGACTCCTGTGTCCTTACGTTTGTCCAAGCTGCC +
Preference number: 6 (lower is better)
Translates to: EVQGEHHVWNLV*DSCVLTFVQAA
Trigger: GGCAGCTTGGACAAACGTAAGGACACAGGAGTCCCAGACCAGGTTCCAGACATGATGTTCTCCTTGAACCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472723.1
CDS GCA 72 bp CTCATGTCCCTCACAACAACCCTGGCATGTAGGTACTaGCAGGGTTCCTTACTGCCCCAAGGAATCAAAGTA +
Preference number: 6 (lower is better)
Translates to: LMSLTTTLACRY*QGSLLPQGIKV
Trigger: TACTTTGATTCCTTGGGGCAGTAAGGAACCCTGGCAGTACCTACATGCCAGGGTTGTTGTGAGGGACATGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472723.1
CDS CCA 72 bp TGCAATGGTATAATCTCATGTCCCTCACAACAACCCTaGCATGTAGGTACTGCCAGGGTTCCTTACTGCCCC +
Preference number: 6 (lower is better)
Translates to: CNGIISCPSQQP*HVGTARVPYCP
Trigger: GGGGCAGTAAGGAACCCTGGCAGTACCTACATGCCAGGGTTGTTGTGAGGGACATGAGATTATACCATTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472723.1