RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TOR1AIP1 (Homo sapiens)

Ensembl gene IDs: ENSG00000143337

Ensembl transcript IDs: ENST00000271583.7, ENST00000435319.8, ENST00000447964.1, ENST00000474875.5, ENST00000524653.1, ENST00000527391.5, ENST00000527867.5, ENST00000528443.6, ENST00000529091.5, ENST00000531630.6, ENST00000531726.5, ENST00000606911.7

Found 460 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp ACTGGAGCCTCTTGTATGCTCCTGACAGTTTTCTTTGAGATCGTTTaGCTTAAATCAGTTTGGGAAGATGCTTCATCCTCTAACACTATA +
Preference number: 1 (lower is better)
Translates to: TGASCMLLTVFFEIV*LKSVWEDASSSNTI
Trigger: TATAGTGTTAGAGGATGAAGCATCTTCCCAAACTGATTTAAGCCAAACGATCTCAAAGAAAACTGTCAGGAGCATACAAGAGGCTCCAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529091.5
3UTR CCA 90 bp GTGGATGCGCGGAAAATGAAATCTTCTTCAATAGCCCAGGACAGCTaGTTAACAAATGGTTTGTCAATTCCTGAAACTCATTTCTTAATT +
Preference number: 1 (lower is better)
Translates to: VDARKMKSSSIAQDS*LTNGLSIPETHFLI
Trigger: AATTAAGAAATGAGTTTCAGGAATTGACAAACCATTTGTTAACCAGCTGTCCTGGGCTATTGAAGAAGATTTCATTTTCCGCGCATCCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
3UTR TCA 90 bp ATCCCAACGGAATCCACCAAGATTAACAGTTCATATACCTATGTTTaGCTAAACTACATCTCAGTGGATTACTGTAACATTTCCTCCCTT +
Preference number: 1 (lower is better)
Translates to: IPTESTKINSSYTYV*LNYISVDYCNISSL
Trigger: AAGGGAGGAAATGTTACAGTAATCCACTGAGATGTAGTTTAGTCAAACATAGGTATATGAACTGTTAATCTTGGTGGATTCCGTTGGGAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271583.7
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
3UTR-3UTR TCA 90 bp TTTTGTTGCCCAGACTGGAGGGCAATAAGCATGGTCTCGGCTTACTGCAACCTCACTTCTGACCTCAGGTaGTCCACCTGCCTTGGCCTG +
Preference number: 2 (lower is better)
Translates to: FCCPDWRAISMVSAYCNLTSDLR*STCLGL
Trigger: CAGGCCAAGGCAGGTGGATCACCTGAGGTCAGAAGT...GAGGTTGCAGTAAGCCGAGACCATGCTTATTGCCCTCCAGTCTGGGCAACAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271583.7
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
3UTR-3UTR CCA 90 bp TTGTTGCCCAGACTGGAGGGCAATAAGCATGGTCTCGGCTTACTGCAACCTCCGGTGATCCACCTGCCTTaGCCTGACCTACTCTTAAGA +
Preference number: 2 (lower is better)
Translates to: LLPRLEGNKHGLGLLQPPVIHLP*PDLLLR
Trigger: TCTTAAGAGTAGGTCAGGCCAAGGCAGGTGGATCAC...CGGAGGTTGCAGTAAGCCGAGACCATGCTTATTGCCCTCCAGTCTGGGCAACAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271583.7
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
3UTR-3UTR CCA 90 bp TTTTGTTGCCCAGACTGGAGGGCAATAAGCATGGTCTCGGCTTACTGCAACCTCGTGATCCACCTGCCTTaGCCTGACCTACTCTTAAGA +
Preference number: 2 (lower is better)
Translates to: FCCPDWRAISMVSAYCNLVIHLP*PDLLLR
Trigger: TCTTAAGAGTAGGTCAGGCCAAGGCAGGTGGATCAC...GAGGTTGCAGTAAGCCGAGACCATGCTTATTGCCCTCCAGTCTGGGCAACAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271583.7
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
3UTR-3UTR TCA 90 bp TTTTGTTGCCCAGACTGGAGGGCAATAAGCATGGTCTCGGCTTACTGCAACCTCTCAGAACTTGGGACATaGTTTTTCTTCTCTCTCACT +
Preference number: 2 (lower is better)
Translates to: FCCPDWRAISMVSAYCNLSELGT*FFFSLT
Trigger: AGTGAGAGAGAAGAAAAATCATGTCCCAAGTTCTGA...GAGGTTGCAGTAAGCCGAGACCATGCTTATTGCCCTCCAGTCTGGGCAACAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000271583.7
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
3UTR-3UTR CCA 90 bp CAAGTGGATGCGCGGAAAATGAAATCTTCTTCAATAGCCCAGGACAGCTGGTTATTTTGTTGCCCAGACTaGAGGGCAATAAGCATGGTC +
Preference number: 2 (lower is better)
Translates to: QVDARKMKSSSIAQDSWLFCCPD*RAISMV
Trigger: GACCATGCTTATTGCCCTCCAGTCTGGGCAACAAAA...TAACCAGCTGTCCTGGGCTATTGAAGAAGATTTCATTTTCCGCGCATCCACTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
3UTR-3UTR TCA 90 bp CATTTTTGTTGCCCAGACTGGAGGGCAATAAGCATGGTCTCGGCTTACTGCAACATTTTGCAATATACATaGAGAATCCTTGGGACAGCC +
Preference number: 2 (lower is better)
Translates to: HFCCPDWRAISMVSAYCNILQYT*RILGTA
Trigger: GGCTGTCCCAAGGATTCTTCATGTATATTGCAAAAT...GTTGCAGTAAGCCGAGACCATGCTTATTGCCCTCCAGTCTGGGCAACAAAAATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000271583.7
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
3UTR-3UTR TCA 90 bp AACAGTAGTGACACTGCTGTGAGAGCTGTCTTGATCATCTTCTTCAGTTTCTCCGGGGTCGACGTAACCTaGTTACAAGATCTTCACTCA +
Preference number: 2 (lower is better)
Translates to: NSSDTAVRAVLIIFFSFSGVDVT*LQDLHS
Trigger: TGAGTGAAGATCTTGTAATCAGGTTACGTCGACCCC...GGAGAAACTGAAGAAGATGATCAAGACAGCTCTCACAGCAGTGTCACTACTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529091.5
3UTR CAA 90 bp CCTGGATCTGGCCTTAACAGTAGTGACACTGCTGTGAGAGCTGTCTaGATCATCTTCTTCAGTTTCTCCTTCTTCAGAGAAATTGACCTT +
Preference number: 2 (lower is better)
Translates to: PGSGLNSSDTAVRAV*IIFFSFSFFREIDL
Trigger: AAGGTCAATTTCTCTGAAGAAGGAGAAACTGAAGAAGATGATCAAGACAGCTCTCACAGCAGTGTCACTACTGTTAAGGCCAGATCCAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529091.5
3UTR-3UTR TCA 90 bp AAATTGACCTTCTGTTGGACACTGGTGGCTTCATATCTTGGGTATCTTAGAGGGCCTCTTGTATGCTCCTaGCAGTTTTCTTTGAGATCG +
Preference number: 2 (lower is better)
Translates to: KLTFCWTLVASYLGYLRGPLVCS*QFSLRS
Trigger: CGATCTCAAAGAAAACTGTCAGGAGCATACAAGAGG...CCCTCTAAGATACCCAAGATATGAAGCCACCAGTGTCCAACAGAAGGTCAATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529091.5
3UTR-3UTR CCA 90 bp CATTTTTGTTGCCCAGACTGGAGGGCAATAAGCATGGTCTCGGCTTACTGCAACACAAATCCCTCTCACTaGTCATACCATAACTGTAAT +
Preference number: 2 (lower is better)
Translates to: HFCCPDWRAISMVSAYCNTNPSH*SYHNCN
Trigger: ATTACAGTTATGGTATGACCAGTGAGAGGGATTTGT...GTTGCAGTAAGCCGAGACCATGCTTATTGCCCTCCAGTCTGGGCAACAAAAATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000271583.7
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
3UTR-3UTR CCA 90 bp GTAAATCTTTATATTTGCTATGGCGTTGCACTAGAGGACTTGGACTGCAACAAGGTGATCCACCTGCCTTaGCCTGACCTACTCTTAAGA +
Preference number: 2 (lower is better)
Translates to: VNLYICYGVALEDLDCNKVIHLP*PDLLLR
Trigger: TCTTAAGAGTAGGTCAGGCCAAGGCAGGTGGATCAC...CTTGTTGCAGTCCAAGTCCTCTAGTGCAACGCCATAGCAAATATAAAGATTTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
3UTR-3UTR CCA 90 bp GTAAATCTTTATATTTGCTATGGCGTTGCACTAGAGGACTTGGACTGCAACAAGTTTTGTTGCCCAGACTaGAGGGCAATAAGCATGGTC +
Preference number: 2 (lower is better)
Translates to: VNLYICYGVALEDLDCNKFCCPD*RAISMV
Trigger: GACCATGCTTATTGCCCTCCAGTCTGGGCAACAAAA...CTTGTTGCAGTCCAAGTCCTCTAGTGCAACGCCATAGCAAATATAAAGATTTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
3UTR-3UTR CCA 90 bp CTGGTGGCTTCATATCTTGGGTATCTTAGAGGGGGTCGACGTAACCTGATTACATTCTTTGAGATCGTTTaGCTTAAATCAGTTTGGGAA +
Preference number: 2 (lower is better)
Translates to: LVASYLGYLRGGRRNLITFFEIV*LKSVWE
Trigger: TTCCCAAACTGATTTAAGCCAAACGATCTCAAAGAA...TGTAATCAGGTTACGTCGACCCCCTCTAAGATACCCAAGATATGAAGCCACCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000529091.5
3UTR-3UTR CCA 90 bp AACAGTAGTGACACTGCTGTGAGAGCTGTCTTGATCATCTTCTTCAGTTTCTCCAAATTGACCTTCTGTTaGACACTGGTGGCTTCATAT +
Preference number: 2 (lower is better)
Translates to: NSSDTAVRAVLIIFFSFSKLTFC*TLVASY
Trigger: ATATGAAGCCACCAGTGTCCAACAGAAGGTCAATTT...GGAGAAACTGAAGAAGATGATCAAGACAGCTCTCACAGCAGTGTCACTACTGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529091.5
3UTR CAA 90 bp GAGGCACTCCATAAAATGTATCACGTGCATAGTAAATCTTTATATTaGCTATGGCGTTGCACTAGAGGACTTGGACTGCAACAAGTGGAT +
Preference number: 2 (lower is better)
Translates to: EALHKMYHVHSKSLY*LWRCTRGLGLQQVD
Trigger: ATCCACTTGTTGCAGTCCAAGTCCTCTAGTGCAACGCCATAGCAAATATAAAGATTTACTATGCACGTGATACATTTTATGGAGTGCCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
3UTR-3UTR GCA 90 bp TGCACTAGAGGACTTGGACTGCAACAAGTGGATGCGCGGAAAATGAAATCTTCTGAACTGCATATAATCTaGACTCCTAAGATACCTTTA +
Preference number: 2 (lower is better)
Translates to: CTRGLGLQQVDARKMKSSELHII*TPKIPL
Trigger: TAAAGGTATCTTAGGAGTGCAGATTATATGCAGTTC...AGAAGATTTCATTTTCCGCGCATCCACTTGTTGCAGTCCAAGTCCTCTAGTGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
3UTR-3UTR CCA 90 bp TGCACTAGAGGACTTGGACTGCAACAAGTGGATGCGCGGAAAATGAAATCTTCTTCTGAATTCTGTCTCTaGTTAGAAAGTGTGAACAAT +
Preference number: 2 (lower is better)
Translates to: CTRGLGLQQVDARKMKSSSEFCL*LESVNN
Trigger: ATTGTTCACACTTTCTAACCAGAGACAGAATTCAGA...AGAAGATTTCATTTTCCGCGCATCCACTTGTTGCAGTCCAAGTCCTCTAGTGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
3UTR-3UTR TCA 90 bp GACGTTAAACCACTCTACTACCACTTGTGGAACTCTCAAAGGGTAAATGACAAATCAGAACTTGGGACATaGTTTTTCTTCTCTCTCACT +
Preference number: 2 (lower is better)
Translates to: DVKPLYYHLWNSQRVNDKSELGT*FFFSLT
Trigger: AGTGAGAGAGAAGAAAAATCATGTCCCAAGTTCTGA...TTTGTCATTTACCCTTTGAGAGTTCCACAAGTGGTAGTAGAGTGGTTTAACGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000435319.8
ENST00000606911.7
3UTR-3UTR TCA 90 bp GTAAATCTTTATATTTGCTATGGCGTTGCACTAGAGGACTTGGACTGCAACAAGTCAGAACTTGGGACATaGTTTTTCTTCTCTCTCACT +
Preference number: 2 (lower is better)
Translates to: VNLYICYGVALEDLDCNKSELGT*FFFSLT
Trigger: AGTGAGAGAGAAGAAAAATCATGTCCCAAGTTCTGA...CTTGTTGCAGTCCAAGTCCTCTAGTGCAACGCCATAGCAAATATAAAGATTTAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
3UTR-3UTR GCA 90 bp CATAGTAAATCTTTATATTTGCTATGGCGTTGCACTAGAGGACTTGGACTGCAAGAGTTTCATTTTTGTTaGCCAGACTGGAGGGCAATA +
Preference number: 2 (lower is better)
Translates to: HSKSLYLLWRCTRGLGLQEFHFC*PDWRAI
Trigger: TATTGCCCTCCAGTCTGGGCAACAAAAATGAAACTC...TTGCAGTCCAAGTCCTCTAGTGCAACGCCATAGCAAATATAAAGATTTACTATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
3UTR-3UTR TCA 90 bp TCCTATAGGCAGAAGCTAAGGAACTCACACCTAAATGGTATAAAAGGGAACATATCAGAACTTGGGACATaGTTTTTCTTCTCTCTCACT +
Preference number: 2 (lower is better)
Translates to: SYRQKLRNSHLNGIKGNISELGT*FFFSLT
Trigger: AGTGAGAGAGAAGAAAAATCATGTCCCAAGTTCTGA...TATGTTCCCTTTTATACCATTTAGGTGTGAGTTCCTTAGCTTCTGCCTATAGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000271583.7
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
3UTR-3UTR TCA 90 bp GACGTTAAACCACTCTACTACCACTTGTGGAACTCTCAAAGGGTAAATGACAAAGAAAACCATAGCATTTaGCAGATGAGAAAGCTCAAT +
Preference number: 2 (lower is better)
Translates to: DVKPLYYHLWNSQRVNDKENHSI*QMRKLN
Trigger: ATTGAGCTTTCTCATCTGTCAAATGCTATGGTTTTC...TTTGTCATTTACCCTTTGAGAGTTCCACAAGTGGTAGTAGAGTGGTTTAACGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435319.8
ENST00000606911.7
3UTR-3UTR GCA 90 bp AGAAAGGACACAAATCCCTCTCACTGGTCATACCATAACTGTAATAACTCAGCCGAACTGCATATAATCTaGACTCCTAAGATACCTTTA +
Preference number: 2 (lower is better)
Translates to: RKDTNPSHWSYHNCNNSAELHII*TPKIPL
Trigger: TAAAGGTATCTTAGGAGTGCAGATTATATGCAGTTC...GGCTGAGTTATTACAGTTATGGTATGACCAGTGAGAGGGATTTGTGTCCTTTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271583.7
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
3UTR-3UTR GCA 90 bp AAGGAACTCACACCTAAATGGTATAAAAGGGAACATAATGGGAAAATCCCTGGTGAACTGCATATAATCTaGACTCCTAAGATACCTTTA +
Preference number: 2 (lower is better)
Translates to: KELTPKWYKREHNGKIPGELHII*TPKIPL
Trigger: TAAAGGTATCTTAGGAGTGCAGATTATATGCAGTTC...ACCAGGGATTTTCCCATTATGTTCCCTTTTATACCATTTAGGTGTGAGTTCCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271583.7
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
3UTR-3UTR CCA 90 bp AAGGAACTCACACCTAAATGGTATAAAAGGGAACATAATGGGAAAATCCCTGGTTCTGAATTCTGTCTCTaGTTAGAAAGTGTGAACAAT +
Preference number: 2 (lower is better)
Translates to: KELTPKWYKREHNGKIPGSEFCL*LESVNN
Trigger: ATTGTTCACACTTTCTAACCAGAGACAGAATTCAGA...ACCAGGGATTTTCCCATTATGTTCCCTTTTATACCATTTAGGTGTGAGTTCCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271583.7
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
3UTR-3UTR GCA 90 bp AAGCTAAGGAACTCACACCTAAATGGTATAAAAGGGAACATAATGGGAAAATCCGAACTGCATATAATCTaGACTCCTAAGATACCTTTA +
Preference number: 2 (lower is better)
Translates to: KLRNSHLNGIKGNIMGKSELHII*TPKIPL
Trigger: TAAAGGTATCTTAGGAGTGCAGATTATATGCAGTTC...GGATTTTCCCATTATGTTCCCTTTTATACCATTTAGGTGTGAGTTCCTTAGCTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271583.7
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
3UTR-3UTR CCA 90 bp AACTCACACCTAAATGGTATAAAAGGGAACATAATGGGAAAATCCCTGGTTACATCTGAATTCTGTCTCTaGTTAGAAAGTGTGAACAAT +
Preference number: 2 (lower is better)
Translates to: NSHLNGIKGNIMGKSLVTSEFCL*LESVNN
Trigger: ATTGTTCACACTTTCTAACCAGAGACAGAATTCAGA...TGTAACCAGGGATTTTCCCATTATGTTCCCTTTTATACCATTTAGGTGTGAGTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271583.7
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
3UTR-3UTR CCA 90 bp AAGCTAAGGAACTCACACCTAAATGGTATAAAAGGGAACATAATGGGAAAATCCTCTGAATTCTGTCTCTaGTTAGAAAGTGTGAACAAT +
Preference number: 2 (lower is better)
Translates to: KLRNSHLNGIKGNIMGKSSEFCL*LESVNN
Trigger: ATTGTTCACACTTTCTAACCAGAGACAGAATTCAGA...GGATTTTCCCATTATGTTCCCTTTTATACCATTTAGGTGTGAGTTCCTTAGCTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271583.7
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
3UTR-3UTR CAA 90 bp TTGTTGCCCAGACTGGAGGGCAATAAGCATGGTCTCGGCTTACTGCAACCTCCGATACATGAAGAATCCTaGGGACAGCCAAGAATTTTT +
Preference number: 3 (lower is better)
Translates to: LLPRLEGNKHGLGLLQPPIHEES*GQPRIF
Trigger: AAAAATTCTTGGCTGTCCCAAGGATTCTTCATGTAT...CGGAGGTTGCAGTAAGCCGAGACCATGCTTATTGCCCTCCAGTCTGGGCAACAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271583.7
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
3UTR-3UTR CAA 90 bp GGATCTGGCCTTAACAGTAGTGACACTGCTGTGAGAGCTGTCTTGATCATCTTCACTCACTGGAGCCTCTaGTATGCTCCTGACAGTTTT +
Preference number: 3 (lower is better)
Translates to: GSGLNSSDTAVRAVLIIFTHWSL*YAPDSF
Trigger: AAAACTGTCAGGAGCATACAAGAGGCTCCAGTGAGT...GAAGATGATCAAGACAGCTCTCACAGCAGTGTCACTACTGTTAAGGCCAGATCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529091.5
3UTR-3UTR CAA 90 bp TTTTGTTGCCCAGACTGGAGGGCAATAAGCATGGTCTCGGCTTACTGCAACCTCATACATGAAGAATCCTaGGGACAGCCAAGAATTTTT +
Preference number: 3 (lower is better)
Translates to: FCCPDWRAISMVSAYCNLIHEES*GQPRIF
Trigger: AAAAATTCTTGGCTGTCCCAAGGATTCTTCATGTAT...GAGGTTGCAGTAAGCCGAGACCATGCTTATTGCCCTCCAGTCTGGGCAACAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271583.7
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
3UTR TCA 72 bp CATATCTTGGGTATCTTAGAGGGGGTCGACGTAACCTaGTTACAAGATCTTCACTCACTGGAGCCTCTTGTA +
Preference number: 3 (lower is better)
Translates to: HILGILEGVDVT*LQDLHSLEPLV
Trigger: TACAAGAGGCTCCAGTGAGTGAAGATCTTGTAATCAGGTTACGTCGACCCCCTCTAAGATACCCAAGATATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000529091.5
3UTR GCA 72 bp CACGTGCATAGTAAATCTTTATATTTGCTATGGCGTTaGACTAGAGGACTTGGACTGCAACAAGTGGATGCG +
Preference number: 3 (lower is better)
Translates to: HVHSKSLYLLWR*TRGLGLQQVDA
Trigger: CGCATCCACTTGTTGCAGTCCAAGTCCTCTAGTGCAACGCCATAGCAAATATAAAGATTTACTATGCACGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
3UTR TCA 72 bp CAAGATCTTCACTCACTGGAGCCTCTTGTATGCTCCTaGCAGTTTTCTTTGAGATCGTTTGGCTTAAATCAG +
Preference number: 3 (lower is better)
Translates to: QDLHSLEPLVCS*QFSLRSFGLNQ
Trigger: CTGATTTAAGCCAAACGATCTCAAAGAAAACTGTCAGGAGCATACAAGAGGCTCCAGTGAGTGAAGATCTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529091.5
3UTR-3UTR CAA 90 bp GACGTTAAACCACTCTACTACCACTTGTGGAACTCTCAAAGGGTAAATGACAAAATTCACTATCTTGGCTaGAGGCACTCCATAAAATGT +
Preference number: 3 (lower is better)
Translates to: DVKPLYYHLWNSQRVNDKIHYLG*RHSIKC
Trigger: ACATTTTATGGAGTGCCTCAAGCCAAGATAGTGAAT...TTTGTCATTTACCCTTTGAGAGTTCCACAAGTGGTAGTAGAGTGGTTTAACGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000435319.8
ENST00000606911.7
3UTR CCA 72 bp TCTTGTATGCTCCTGACAGTTTTCTTTGAGATCGTTTaGCTTAAATCAGTTTGGGAAGATGCTTCATCCTCT +
Preference number: 3 (lower is better)
Translates to: SCMLLTVFFEIV*LKSVWEDASSS
Trigger: AGAGGATGAAGCATCTTCCCAAACTGATTTAAGCCAAACGATCTCAAAGAAAACTGTCAGGAGCATACAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529091.5
3UTR CCA 72 bp CGGAAAATGAAATCTTCTTCAATAGCCCAGGACAGCTaGTTAACAAATGGTTTGTCAATTCCTGAAACTCAT +
Preference number: 3 (lower is better)
Translates to: RKMKSSSIAQDS*LTNGLSIPETH
Trigger: ATGAGTTTCAGGAATTGACAAACCATTTGTTAACCAGCTGTCCTGGGCTATTGAAGAAGATTTCATTTTCCG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR GCA 90 bp TTGTTGCCCAGACTGGAGGGCAATAAGCATGGTCTCGGCTTACTGCAACCTCCGGGTCAGGGAGGCAGTTaGGAGTCGCTGGGGCCGCCG +
Preference number: 4 (lower is better)
Translates to: LLPRLEGNKHGLGLLQPPGQGGS*ESLGPP
Trigger: CGGCGGCCCCAGCGACTCGCAACTGCCTCCCTGACC...CGGAGGTTGCAGTAAGCCGAGACCATGCTTATTGCCCTCCAGTCTGGGCAACAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271583.7
ENST00000528443.6
ENST00000606911.7
CDS-3UTR GCA 90 bp TTGTTGCCCAGACTGGAGGGCAATAAGCATGGTCTCGGCTTACTGCAACCTCCGTCCTGGGGTCGCGGCTaGCTCCGCTGCCTAGACCGA +
Preference number: 4 (lower is better)
Translates to: LLPRLEGNKHGLGLLQPPSWGRG*LRCLDR
Trigger: TCGGTCTAGGCAGCGGAGGCAGCCGCGACCCCAGGA...CGGAGGTTGCAGTAAGCCGAGACCATGCTTATTGCCCTCCAGTCTGGGCAACAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271583.7
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR CCA 90 bp TTGTTGCCCAGACTGGAGGGCAATAAGCATGGTCTCGGCTTACTGCAACCTCCGGCTTCTCGGGGGTGTTaGGCGGTGGCCGCTGTGGTC +
Preference number: 4 (lower is better)
Translates to: LLPRLEGNKHGLGLLQPPASRGC*AVAAVV
Trigger: GACCACAGCGGCCACCGCCCAACACCCCCGAGAAGC...CGGAGGTTGCAGTAAGCCGAGACCATGCTTATTGCCCTCCAGTCTGGGCAACAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000271583.7
ENST00000528443.6
ENST00000606911.7
CDS-3UTR GCA 90 bp TTGTTGCCCAGACTGGAGGGCAATAAGCATGGTCTCGGCTTACTGCAACCTCCGACGCAGGCGCATCGCTaGTGCCGCCATTTTGAGGGG +
Preference number: 4 (lower is better)
Translates to: LLPRLEGNKHGLGLLQPPTQAHR*CRHFEG
Trigger: CCCCTCAAAATGGCGGCAGCAGCGATGCGCCTGCGT...CGGAGGTTGCAGTAAGCCGAGACCATGCTTATTGCCCTCCAGTCTGGGCAACAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271583.7
ENST00000528443.6
ENST00000606911.7
CDS-3UTR GCA 90 bp TTTTGTTGCCCAGACTGGAGGGCAATAAGCATGGTCTCGGCTTACTGCAACCTCTCCTGGGGTCGCGGCTaGCTCCGCTGCCTAGACCGA +
Preference number: 4 (lower is better)
Translates to: FCCPDWRAISMVSAYCNLSWGRG*LRCLDR
Trigger: TCGGTCTAGGCAGCGGAGGCAGCCGCGACCCCAGGA...GAGGTTGCAGTAAGCCGAGACCATGCTTATTGCCCTCCAGTCTGGGCAACAAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271583.7
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR CCA 90 bp CATTTTTGTTGCCCAGACTGGAGGGCAATAAGCATGGTCTCGGCTTACTGCAACGCAGTTGCGAGTCGCTaGGGCCGCCGCCTGCGTCGT +
Preference number: 4 (lower is better)
Translates to: HFCCPDWRAISMVSAYCNAVASR*GRRLRR
Trigger: ACGACGCAGGCGGCGGCCCCAGCGACTCGCAACTGC...GTTGCAGTAAGCCGAGACCATGCTTATTGCCCTCCAGTCTGGGCAACAAAAATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000271583.7
ENST00000528443.6
ENST00000606911.7
CDS-3UTR CCA 90 bp TTGTTGCCCAGACTGGAGGGCAATAAGCATGGTCTCGGCTTACTGCAACCTCCGAGGTTCTCCTGCCGGTaGTGGCGATGGCTTCTCGGG +
Preference number: 4 (lower is better)
Translates to: LLPRLEGNKHGLGLLQPPRFSCR*WRWLLG
Trigger: CCCGAGAAGCCATCGCCACCACCGGCAGGAGAACCT...CGGAGGTTGCAGTAAGCCGAGACCATGCTTATTGCCCTCCAGTCTGGGCAACAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271583.7
ENST00000528443.6
ENST00000606911.7
CDS-3UTR CCA 90 bp ATCCCTGGATCTGGCCTTAACAGTAGTGACACTGCTGTGAGAGCTGTCTTGATCCCCCCGCGCGTTCCCTaGCTCGCGGCTGGGACTGTT +
Preference number: 4 (lower is better)
Translates to: IPGSGLNSSDTAVRAVLIPPRVP*LAAGTV
Trigger: AACAGTCCCAGCCGCGAGCCAGGGAACGCGCGGGGG...GATCAAGACAGCTCTCACAGCAGTGTCACTACTGTTAAGGCCAGATCCAGGGAT
59% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000529091.5
CDS-3UTR TCA 90 bp CTTGGGTATCTTAGAGGGGGTCGACGTAACCTGATTACAAGATCTTCACTCACTCACACCAGGCGGGCATaGGCTCCACCGAGGCGCGCG +
Preference number: 4 (lower is better)
Translates to: LGYLRGGRRNLITRSSLTHTRRA*APPRRA
Trigger: CGCGCGCCTCGGTGGAGCTCATGCCCGCCTGGTGTG...AGTGAGTGAAGATCTTGTAATCAGGTTACGTCGACCCCCTCTAAGATACCCAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000529091.5
CDS-3UTR CCA 90 bp TTGTTGCCCAGACTGGAGGGCAATAAGCATGGTCTCGGCTTACTGCAACCTCCGGTCGCCGTACACTTCTaGCGGCTCGTCCGAGAACCT +
Preference number: 4 (lower is better)
Translates to: LLPRLEGNKHGLGLLQPPVAVHF*RLVREP
Trigger: AGGTTCTCGGACGAGCCGCCAGAAGTGTACGGCGAC...CGGAGGTTGCAGTAAGCCGAGACCATGCTTATTGCCCTCCAGTCTGGGCAACAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271583.7
ENST00000528443.6
ENST00000606911.7
CDS-3UTR CCA 90 bp TTTTGTTGCCCAGACTGGAGGGCAATAAGCATGGTCTCGGCTTACTGCAACCTCCTGGGTCAGCTGCTGTaGATCGCTCCCGCCTCCTGG +
Preference number: 4 (lower is better)
Translates to: FCCPDWRAISMVSAYCNLLGQLL*IAPASW
Trigger: CCAGGAGGCGGGAGCGATCCACAGCAGCTGACCCAG...GAGGTTGCAGTAAGCCGAGACCATGCTTATTGCCCTCCAGTCTGGGCAACAAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528443.6
CDS-3UTR CCA 90 bp TTGTTGCCCAGACTGGAGGGCAATAAGCATGGTCTCGGCTTACTGCAACCTCCGAGGCAGTGCCTGAGCTaGGTCAGCTGCTGTGGATCG +
Preference number: 4 (lower is better)
Translates to: LLPRLEGNKHGLGLLQPPRQCLS*VSCCGS
Trigger: CGATCCACAGCAGCTGACCCAGCTCAGGCACTGCCT...CGGAGGTTGCAGTAAGCCGAGACCATGCTTATTGCCCTCCAGTCTGGGCAACAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528443.6
CDS-3UTR TCA 90 bp TTGTTGCCCAGACTGGAGGGCAATAAGCATGGTCTCGGCTTACTGCAACCTCCGTCCTCTTCAGAGGAATaGGAGTCCCGCAGCCCTCTC +
Preference number: 4 (lower is better)
Translates to: LLPRLEGNKHGLGLLQPPSSSEE*ESRSPL
Trigger: GAGAGGGCTGCGGGACTCTCATTCCTCTGAAGAGGA...CGGAGGTTGCAGTAAGCCGAGACCATGCTTATTGCCCTCCAGTCTGGGCAACAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271583.7
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR CCA 90 bp CAAGTGGATGCGCGGAAAATGAAATCTTCTTCAATAGCCCAGGACAGCTGGTTAGCAGTTGCGAGTCGCTaGGGCCGCCGCCTGCGTCGT +
Preference number: 4 (lower is better)
Translates to: QVDARKMKSSSIAQDSWLAVASR*GRRLRR
Trigger: ACGACGCAGGCGGCGGCCCCAGCGACTCGCAACTGC...TAACCAGCTGTCCTGGGCTATTGAAGAAGATTTCATTTTCCGCGCATCCACTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528443.6
ENST00000606911.7
CDS-3UTR TCA 90 bp TTGTTGCCCAGACTGGAGGGCAATAAGCATGGTCTCGGCTTACTGCAACCTCCGAGAGCCTGCGGGAAATaGCTCAAAGCGGTGTACCAC +
Preference number: 4 (lower is better)
Translates to: LLPRLEGNKHGLGLLQPPRACGK*LKAVYH
Trigger: GTGGTACACCGCTTTGAGTCATTTCCCGCAGGCTCT...CGGAGGTTGCAGTAAGCCGAGACCATGCTTATTGCCCTCCAGTCTGGGCAACAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271583.7
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR GCA 90 bp TTTTGTTGCCCAGACTGGAGGGCAATAAGCATGGTCTCGGCTTACTGCAACCTCGACCCTAGGTTCTCCTaGCGGTGGTGGCGATGGCTT +
Preference number: 4 (lower is better)
Translates to: FCCPDWRAISMVSAYCNLDPRFS*RWWRWL
Trigger: AAGCCATCGCCACCACCGGCAGGAGAACCTAGGGTC...GAGGTTGCAGTAAGCCGAGACCATGCTTATTGCCCTCCAGTCTGGGCAACAAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271583.7
ENST00000528443.6
ENST00000606911.7
CDS-3UTR CCA 90 bp CATTTTTGTTGCCCAGACTGGAGGGCAATAAGCATGGTCTCGGCTTACTGCAACAGGTTCTCCTGCCGGTaGTGGCGATGGCTTCTCGGG +
Preference number: 4 (lower is better)
Translates to: HFCCPDWRAISMVSAYCNRFSCR*WRWLLG
Trigger: CCCGAGAAGCCATCGCCACCACCGGCAGGAGAACCT...GTTGCAGTAAGCCGAGACCATGCTTATTGCCCTCCAGTCTGGGCAACAAAAATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000271583.7
ENST00000528443.6
ENST00000606911.7
CDS-3UTR GCA 90 bp CATTTTTGTTGCCCAGACTGGAGGGCAATAAGCATGGTCTCGGCTTACTGCAACCGCCTGCGTCGTCGCTaGTGTGTAGCAAACCTGCCT +
Preference number: 4 (lower is better)
Translates to: HFCCPDWRAISMVSAYCNRLRRR*CVANLP
Trigger: AGGCAGGTTTGCTACACAGCAGCGACGACGCAGGCG...GTTGCAGTAAGCCGAGACCATGCTTATTGCCCTCCAGTCTGGGCAACAAAAATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000271583.7
ENST00000528443.6
ENST00000606911.7
CDS-3UTR CCA 90 bp CAAGTGGATGCGCGGAAAATGAAATCTTCTTCAATAGCCCAGGACAGCTGGTTATGCCGGTGGTGGCGATaGCTTCTCGGGGGTGTTGGG +
Preference number: 4 (lower is better)
Translates to: QVDARKMKSSSIAQDSWLCRWWR*LLGGVG
Trigger: CCCAACACCCCCGAGAAGCCATCGCCACCACCGGCA...TAACCAGCTGTCCTGGGCTATTGAAGAAGATTTCATTTTCCGCGCATCCACTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000528443.6
ENST00000606911.7
CDS-3UTR CCA 90 bp TTGTTGCCCAGACTGGAGGGCAATAAGCATGGTCTCGGCTTACTGCAACCTCCGGCGAAGATGGCTTTATaGACCCTAGGTTCTCCTGCC +
Preference number: 4 (lower is better)
Translates to: LLPRLEGNKHGLGLLQPPAKMAL*TLGSPA
Trigger: GGCAGGAGAACCTAGGGTCCATAAAGCCATCTTCGC...CGGAGGTTGCAGTAAGCCGAGACCATGCTTATTGCCCTCCAGTCTGGGCAACAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271583.7
ENST00000528443.6
ENST00000606911.7
CDS-3UTR CCA 90 bp TTGTTGCCCAGACTGGAGGGCAATAAGCATGGTCTCGGCTTACTGCAACCTCCGCAGTCACTTGTCGGCTaGAGGTTGATGGTGACTGGT +
Preference number: 4 (lower is better)
Translates to: LLPRLEGNKHGLGLLQPPQSLVG*RLMVTG
Trigger: ACCAGTCACCATCAACCTCCAGCCGACAAGTGACTG...CGGAGGTTGCAGTAAGCCGAGACCATGCTTATTGCCCTCCAGTCTGGGCAACAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271583.7
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR TCA 90 bp TTTTGTTGCCCAGACTGGAGGGCAATAAGCATGGTCTCGGCTTACTGCAACCTCAGAGCCTGCGGGAAATaGCTCAAAGCGGTGTACCAC +
Preference number: 4 (lower is better)
Translates to: FCCPDWRAISMVSAYCNLRACGK*LKAVYH
Trigger: GTGGTACACCGCTTTGAGTCATTTCCCGCAGGCTCT...GAGGTTGCAGTAAGCCGAGACCATGCTTATTGCCCTCCAGTCTGGGCAACAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271583.7
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR TCA 90 bp TTGTTGCCCAGACTGGAGGGCAATAAGCATGGTCTCGGCTTACTGCAACCTCCGACAGGCAGAACTAAGTaGGAAATACGGCTCCAGAGG +
Preference number: 4 (lower is better)
Translates to: LLPRLEGNKHGLGLLQPPTGRTK*EIRLQR
Trigger: CCTCTGGAGCCGTATTTCTCACTTAGTTCTGCCTGT...CGGAGGTTGCAGTAAGCCGAGACCATGCTTATTGCCCTCCAGTCTGGGCAACAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271583.7
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR TCA 90 bp CATTTTTGTTGCCCAGACTGGAGGGCAATAAGCATGGTCTCGGCTTACTGCAACACTTCTGACCTCAGGTaGTCCACCTGCCTTGGCCTG +
Preference number: 4 (lower is better)
Translates to: HFCCPDWRAISMVSAYCNTSDLR*STCLGL
Trigger: CAGGCCAAGGCAGGTGGATCACCTGAGGTCAGAAGT...GTTGCAGTAAGCCGAGACCATGCTTATTGCCCTCCAGTCTGGGCAACAAAAATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000271583.7
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR GCA 90 bp CAAGTGGATGCGCGGAAAATGAAATCTTCTTCAATAGCCCAGGACAGCTGGTTACAGGCGCATCGCTGCTaGCGCCATTTTGAGGGGCGA +
Preference number: 4 (lower is better)
Translates to: QVDARKMKSSSIAQDSWLQAHRC*RHFEGR
Trigger: TCGCCCCTCAAAATGGCGGCAGCAGCGATGCGCCTG...TAACCAGCTGTCCTGGGCTATTGAAGAAGATTTCATTTTCCGCGCATCCACTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000528443.6
ENST00000606911.7
CDS-3UTR GCA 90 bp TGCACTAGAGGACTTGGACTGCAACAAGTGGATGCGCGGAAAATGAAATCTTCTACGCAGGCGCATCGCTaGTGCCGCCATTTTGAGGGG +
Preference number: 4 (lower is better)
Translates to: CTRGLGLQQVDARKMKSSTQAHR*CRHFEG
Trigger: CCCCTCAAAATGGCGGCAGCAGCGATGCGCCTGCGT...AGAAGATTTCATTTTCCGCGCATCCACTTGTTGCAGTCCAAGTCCTCTAGTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000528443.6
ENST00000606911.7
CDS-3UTR CCA 90 bp AGAAAGGACACAAATCCCTCTCACTGGTCATACCATAACTGTAATAACTCAGCCACTTCCCGCCGGCCCTaGCGCGACGGAGGAGTTCTG +
Preference number: 4 (lower is better)
Translates to: RKDTNPSHWSYHNCNNSATSRRP*RDGGVL
Trigger: CAGAACTCCTCCGTCGCGCCAGGGCCGGCGGGAAGT...GGCTGAGTTATTACAGTTATGGTATGACCAGTGAGAGGGATTTGTGTCCTTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271583.7
ENST00000528443.6
ENST00000606911.7
CDS-3UTR CCA 90 bp CATTTTTGTTGCCCAGACTGGAGGGCAATAAGCATGGTCTCGGCTTACTGCAACGGGGCGATAGAAGGATaGCAGGGCAACTTGCCTGTC +
Preference number: 4 (lower is better)
Translates to: HFCCPDWRAISMVSAYCNGAIEG*QGNLPV
Trigger: GACAGGCAAGTTGCCCTGCCATCCTTCTATCGCCCC...GTTGCAGTAAGCCGAGACCATGCTTATTGCCCTCCAGTCTGGGCAACAAAAATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528443.6
CDS-3UTR CCA 90 bp CAAGTGGATGCGCGGAAAATGAAATCTTCTTCAATAGCCCAGGACAGCTGGTTACTCCCGCCTCCTGGCTaGAGGCACCAAAGAGGAGGA +
Preference number: 4 (lower is better)
Translates to: QVDARKMKSSSIAQDSWLLPPPG*RHQRGG
Trigger: TCCTCCTCTTTGGTGCCTCCAGCCAGGAGGCGGGAG...TAACCAGCTGTCCTGGGCTATTGAAGAAGATTTCATTTTCCGCGCATCCACTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528443.6
CDS-3UTR TCA 90 bp TTTTGTTGCCCAGACTGGAGGGCAATAAGCATGGTCTCGGCTTACTGCAACCTCGCCCGCCATAGTTGTTaGCGTAGCTTTAGTCGATCG +
Preference number: 4 (lower is better)
Translates to: FCCPDWRAISMVSAYCNLARHSC*RSFSRS
Trigger: CGATCGACTAAAGCTACGTCAACAACTATGGCGGGC...GAGGTTGCAGTAAGCCGAGACCATGCTTATTGCCCTCCAGTCTGGGCAACAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271583.7
ENST00000528443.6
ENST00000606911.7
CDS-3UTR TCA 90 bp TTTTGTTGCCCAGACTGGAGGGCAATAAGCATGGTCTCGGCTTACTGCAACCTCCTGGTCTTGAACTTCTaGCCTCAGGTGATCCACCTG +
Preference number: 4 (lower is better)
Translates to: FCCPDWRAISMVSAYCNLLVLNF*PQVIHL
Trigger: CAGGTGGATCACCTGAGGTCAGAAGTTCAAGACCAG...GAGGTTGCAGTAAGCCGAGACCATGCTTATTGCCCTCCAGTCTGGGCAACAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271583.7
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR GCA 90 bp TGCACTAGAGGACTTGGACTGCAACAAGTGGATGCGCGGAAAATGAAATCTTCTGACCCTAGGTTCTCCTaGCGGTGGTGGCGATGGCTT +
Preference number: 4 (lower is better)
Translates to: CTRGLGLQQVDARKMKSSDPRFS*RWWRWL
Trigger: AAGCCATCGCCACCACCGGCAGGAGAACCTAGGGTC...AGAAGATTTCATTTTCCGCGCATCCACTTGTTGCAGTCCAAGTCCTCTAGTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528443.6
ENST00000606911.7
CDS-3UTR GCA 90 bp TTTTGTTGCCCAGACTGGAGGGCAATAAGCATGGTCTCGGCTTACTGCAACCTCCTAGAGGACTTGGACTaGAACAAGTGGATGCGCGGA +
Preference number: 4 (lower is better)
Translates to: FCCPDWRAISMVSAYCNLLEDLD*NKWMRG
Trigger: TCCGCGCATCCACTTGTTGCAGTCCAAGTCCTCTAG...GAGGTTGCAGTAAGCCGAGACCATGCTTATTGCCCTCCAGTCTGGGCAACAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR CCA 90 bp CAAGTGGATGCGCGGAAAATGAAATCTTCTTCAATAGCCCAGGACAGCTGGTTACCGGGGACCTTTCTTTaGCCACCAGGGGCTCGAAGT +
Preference number: 4 (lower is better)
Translates to: QVDARKMKSSSIAQDSWLPGTFL*PPGARS
Trigger: ACTTCGAGCCCCTGGTGGCCAAAGAAAGGTCCCCGG...TAACCAGCTGTCCTGGGCTATTGAAGAAGATTTCATTTTCCGCGCATCCACTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR CCA 90 bp TTGTTGCCCAGACTGGAGGGCAATAAGCATGGTCTCGGCTTACTGCAACCTCCGCCTTCTGTTGGACACTaGTGGCTTCATATCTTGGGT +
Preference number: 4 (lower is better)
Translates to: LLPRLEGNKHGLGLLQPPPSVGH*WLHILG
Trigger: ACCCAAGATATGAAGCCACCAGTGTCCAACAGAAGG...CGGAGGTTGCAGTAAGCCGAGACCATGCTTATTGCCCTCCAGTCTGGGCAACAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271583.7
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR CCA 90 bp TTTTGTTGCCCAGACTGGAGGGCAATAAGCATGGTCTCGGCTTACTGCAACCTCCAGTCACTTGTCGGCTaGAGGTTGATGGTGACTGGT +
Preference number: 4 (lower is better)
Translates to: FCCPDWRAISMVSAYCNLQSLVG*RLMVTG
Trigger: ACCAGTCACCATCAACCTCCAGCCGACAAGTGACTG...GAGGTTGCAGTAAGCCGAGACCATGCTTATTGCCCTCCAGTCTGGGCAACAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271583.7
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR CCA 90 bp TTGTTGCCCAGACTGGAGGGCAATAAGCATGGTCTCGGCTTACTGCAACCTCCGTTTTGTTGCCCAGACTaGAGGGCAATAAGCATGGTC +
Preference number: 4 (lower is better)
Translates to: LLPRLEGNKHGLGLLQPPFCCPD*RAISMV
Trigger: GACCATGCTTATTGCCCTCCAGTCTGGGCAACAAAA...CGGAGGTTGCAGTAAGCCGAGACCATGCTTATTGCCCTCCAGTCTGGGCAACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271583.7
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR TCA 90 bp TTGTTGCCCAGACTGGAGGGCAATAAGCATGGTCTCGGCTTACTGCAACCTCCGCTTCTTCAGAGAAATTaGCCTTCTGTTGGACACTGG +
Preference number: 4 (lower is better)
Translates to: LLPRLEGNKHGLGLLQPPLLQRN*PSVGHW
Trigger: CCAGTGTCCAACAGAAGGTCAATTTCTCTGAAGAAG...CGGAGGTTGCAGTAAGCCGAGACCATGCTTATTGCCCTCCAGTCTGGGCAACAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271583.7
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR TCA 90 bp CATTTTTGTTGCCCAGACTGGAGGGCAATAAGCATGGTCTCGGCTTACTGCAACAGTAAGATAGCAGGCTaGGACCGAGGATGGGAGCTA +
Preference number: 4 (lower is better)
Translates to: HFCCPDWRAISMVSAYCNSKIAG*DRGWEL
Trigger: TAGCTCCCATCCTCGGTCTCAGCCTGCTATCTTACT...GTTGCAGTAAGCCGAGACCATGCTTATTGCCCTCCAGTCTGGGCAACAAAAATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000271583.7
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR TCA 90 bp TTGTTGCCCAGACTGGAGGGCAATAAGCATGGTCTCGGCTTACTGCAACCTCCGGGTCTACCTCTAGTTTaGCAGTATCACTGTCTTGAG +
Preference number: 4 (lower is better)
Translates to: LLPRLEGNKHGLGLLQPPGLPLV*QYHCLE
Trigger: CTCAAGACAGTGATACTGTCAAACTAGAGGTAGACC...CGGAGGTTGCAGTAAGCCGAGACCATGCTTATTGCCCTCCAGTCTGGGCAACAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271583.7
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR GCA 90 bp AACTCACACCTAAATGGTATAAAAGGGAACATAATGGGAAAATCCCTGGTTACAGGTCAGGGAGGCAGTTaGGAGTCGCTGGGGCCGCCG +
Preference number: 4 (lower is better)
Translates to: NSHLNGIKGNIMGKSLVTGQGGS*ESLGPP
Trigger: CGGCGGCCCCAGCGACTCGCAACTGCCTCCCTGACC...TGTAACCAGGGATTTTCCCATTATGTTCCCTTTTATACCATTTAGGTGTGAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000271583.7
ENST00000528443.6
ENST00000606911.7
CDS-3UTR GCA 90 bp AGAAAGGACACAAATCCCTCTCACTGGTCATACCATAACTGTAATAACTCAGCCCAGGCGCATCGCTGCTaGCGCCATTTTGAGGGGCGA +
Preference number: 4 (lower is better)
Translates to: RKDTNPSHWSYHNCNNSAQAHRC*RHFEGR
Trigger: TCGCCCCTCAAAATGGCGGCAGCAGCGATGCGCCTG...GGCTGAGTTATTACAGTTATGGTATGACCAGTGAGAGGGATTTGTGTCCTTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271583.7
ENST00000528443.6
ENST00000606911.7
CDS-3UTR GCA 90 bp AAGGAACTCACACCTAAATGGTATAAAAGGGAACATAATGGGAAAATCCCTGGTTCCTGGGGTCGCGGCTaGCTCCGCTGCCTAGACCGA +
Preference number: 4 (lower is better)
Translates to: KELTPKWYKREHNGKIPGSWGRG*LRCLDR
Trigger: TCGGTCTAGGCAGCGGAGGCAGCCGCGACCCCAGGA...ACCAGGGATTTTCCCATTATGTTCCCTTTTATACCATTTAGGTGTGAGTTCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000271583.7
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR GCA 90 bp TTGTTGCCCAGACTGGAGGGCAATAAGCATGGTCTCGGCTTACTGCAACCTCCGTATTTGCTATGGCGTTaGACTAGAGGACTTGGACTG +
Preference number: 4 (lower is better)
Translates to: LLPRLEGNKHGLGLLQPPYLLWR*TRGLGL
Trigger: CAGTCCAAGTCCTCTAGTGCAACGCCATAGCAAATA...CGGAGGTTGCAGTAAGCCGAGACCATGCTTATTGCCCTCCAGTCTGGGCAACAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR GCA 90 bp AGAAAGGACACAAATCCCTCTCACTGGTCATACCATAACTGTAATAACTCAGCCCTGAGCTGGGTCAGCTaGTGTGGATCGCTCCCGCCT +
Preference number: 4 (lower is better)
Translates to: RKDTNPSHWSYHNCNNSALSWVS*CGSLPP
Trigger: AGGCGGGAGCGATCCACAGCAGCTGACCCAGCTCAG...GGCTGAGTTATTACAGTTATGGTATGACCAGTGAGAGGGATTTGTGTCCTTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528443.6
CDS-3UTR CCA 90 bp AACTCACACCTAAATGGTATAAAAGGGAACATAATGGGAAAATCCCTGGTTACAGCAGTTGCGAGTCGCTaGGGCCGCCGCCTGCGTCGT +
Preference number: 4 (lower is better)
Translates to: NSHLNGIKGNIMGKSLVTAVASR*GRRLRR
Trigger: ACGACGCAGGCGGCGGCCCCAGCGACTCGCAACTGC...TGTAACCAGGGATTTTCCCATTATGTTCCCTTTTATACCATTTAGGTGTGAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271583.7
ENST00000528443.6
ENST00000606911.7
CDS-3UTR CCA 90 bp TTCTCTAAGGAACTGCATATAATCTGCACTCCTAAGATACCTTTAACAGAGCTCGGGCGGTGGCCGCTGTaGTCAGGGAGGCAGTTGCGA +
Preference number: 4 (lower is better)
Translates to: FSKELHIICTPKIPLTELGRWPL*SGRQLR
Trigger: TCGCAACTGCCTCCCTGACCACAGCGGCCACCGCCC...GAGCTCTGTTAAAGGTATCTTAGGAGTGCAGATTATATGCAGTTCCTTAGAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271583.7
ENST00000528443.6
ENST00000606911.7
CDS-3UTR CCA 90 bp AAGGAACTCACACCTAAATGGTATAAAAGGGAACATAATGGGAAAATCCCTGGTGGGCGGTGGCCGCTGTaGTCAGGGAGGCAGTTGCGA +
Preference number: 4 (lower is better)
Translates to: KELTPKWYKREHNGKIPGGRWPL*SGRQLR
Trigger: TCGCAACTGCCTCCCTGACCACAGCGGCCACCGCCC...ACCAGGGATTTTCCCATTATGTTCCCTTTTATACCATTTAGGTGTGAGTTCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271583.7
ENST00000528443.6
ENST00000606911.7
CDS-3UTR CCA 90 bp TTCTCTAAGGAACTGCATATAATCTGCACTCCTAAGATACCTTTAACAGAGCTCGCTTCTCGGGGGTGTTaGGCGGTGGCCGCTGTGGTC +
Preference number: 4 (lower is better)
Translates to: FSKELHIICTPKIPLTELASRGC*AVAAVV
Trigger: GACCACAGCGGCCACCGCCCAACACCCCCGAGAAGC...GAGCTCTGTTAAAGGTATCTTAGGAGTGCAGATTATATGCAGTTCCTTAGAGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000271583.7
ENST00000528443.6
ENST00000606911.7
CDS-3UTR CCA 90 bp TCCTATAGGCAGAAGCTAAGGAACTCACACCTAAATGGTATAAAAGGGAACATAGCTTCTCGGGGGTGTTaGGCGGTGGCCGCTGTGGTC +
Preference number: 4 (lower is better)
Translates to: SYRQKLRNSHLNGIKGNIASRGC*AVAAVV
Trigger: GACCACAGCGGCCACCGCCCAACACCCCCGAGAAGC...TATGTTCCCTTTTATACCATTTAGGTGTGAGTTCCTTAGCTTCTGCCTATAGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000271583.7
ENST00000528443.6
ENST00000606911.7
CDS-3UTR CCA 90 bp CATTTTTGTTGCCCAGACTGGAGGGCAATAAGCATGGTCTCGGCTTACTGCAACGCGAAGATGGCTTTATaGACCCTAGGTTCTCCTGCC +
Preference number: 4 (lower is better)
Translates to: HFCCPDWRAISMVSAYCNAKMAL*TLGSPA
Trigger: GGCAGGAGAACCTAGGGTCCATAAAGCCATCTTCGC...GTTGCAGTAAGCCGAGACCATGCTTATTGCCCTCCAGTCTGGGCAACAAAAATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000271583.7
ENST00000528443.6
ENST00000606911.7
CDS-3UTR CCA 90 bp TTCTCTAAGGAACTGCATATAATCTGCACTCCTAAGATACCTTTAACAGAGCTCACTTCCCGCCGGCCCTaGCGCGACGGAGGAGTTCTG +
Preference number: 4 (lower is better)
Translates to: FSKELHIICTPKIPLTELTSRRP*RDGGVL
Trigger: CAGAACTCCTCCGTCGCGCCAGGGCCGGCGGGAAGT...GAGCTCTGTTAAAGGTATCTTAGGAGTGCAGATTATATGCAGTTCCTTAGAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271583.7
ENST00000528443.6
ENST00000606911.7
CDS-3UTR CCA 90 bp CATAGTAAATCTTTATATTTGCTATGGCGTTGCACTAGAGGACTTGGACTGCAAACTTCCCGCCGGCCCTaGCGCGACGGAGGAGTTCTG +
Preference number: 4 (lower is better)
Translates to: HSKSLYLLWRCTRGLGLQTSRRP*RDGGVL
Trigger: CAGAACTCCTCCGTCGCGCCAGGGCCGGCGGGAAGT...TTGCAGTCCAAGTCCTCTAGTGCAACGCCATAGCAAATATAAAGATTTACTATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528443.6
ENST00000606911.7
CDS-3UTR CCA 90 bp AGAAAGGACACAAATCCCTCTCACTGGTCATACCATAACTGTAATAACTCAGCCATTTCCTCGGTTTCCTaGGGTCGCGGCTGCCTCCGC +
Preference number: 4 (lower is better)
Translates to: RKDTNPSHWSYHNCNNSAISSVS*GRGCLR
Trigger: GCGGAGGCAGCCGCGACCCCAGGAAACCGAGGAAAT...GGCTGAGTTATTACAGTTATGGTATGACCAGTGAGAGGGATTTGTGTCCTTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271583.7
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR CCA 90 bp TTTTGTTGCCCAGACTGGAGGGCAATAAGCATGGTCTCGGCTTACTGCAACCTCTATTCTTGCAGTTTGTaGGGCCCATTCCTGGGGAGT +
Preference number: 4 (lower is better)
Translates to: FCCPDWRAISMVSAYCNLYSCSL*GPFLGS
Trigger: ACTCCCCAGGAATGGGCCCCACAAACTGCAAGAATA...GAGGTTGCAGTAAGCCGAGACCATGCTTATTGCCCTCCAGTCTGGGCAACAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271583.7
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR CCA 90 bp TTTTGTTGCCCAGACTGGAGGGCAATAAGCATGGTCTCGGCTTACTGCAACCTCTCCCATCAATCCGGATaGCACGGACACTACGAAAAG +
Preference number: 4 (lower is better)
Translates to: FCCPDWRAISMVSAYCNLSHQSG*HGHYEK
Trigger: CTTTTCGTAGTGTCCGTGCCATCCGGATTGATGGGA...GAGGTTGCAGTAAGCCGAGACCATGCTTATTGCCCTCCAGTCTGGGCAACAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271583.7
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR CCA 90 bp CATTTTTGTTGCCCAGACTGGAGGGCAATAAGCATGGTCTCGGCTTACTGCAACAAGTCTAGCCGCTCGTaGCAAGTGTTGACTGCGTGT +
Preference number: 4 (lower is better)
Translates to: HFCCPDWRAISMVSAYCNKSSRS*QVLTAC
Trigger: ACACGCAGTCAACACTTGCCACGAGCGGCTAGACTT...GTTGCAGTAAGCCGAGACCATGCTTATTGCCCTCCAGTCTGGGCAACAAAAATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528443.6
CDS-3UTR GCA 90 bp GTAAATCTTTATATTTGCTATGGCGTTGCACTAGAGGACTTGGACTGCAACAAGACGCAGGCGCATCGCTaGTGCCGCCATTTTGAGGGG +
Preference number: 4 (lower is better)
Translates to: VNLYICYGVALEDLDCNKTQAHR*CRHFEG
Trigger: CCCCTCAAAATGGCGGCAGCAGCGATGCGCCTGCGT...CTTGTTGCAGTCCAAGTCCTCTAGTGCAACGCCATAGCAAATATAAAGATTTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528443.6
ENST00000606911.7
CDS-3UTR GCA 90 bp AAGCTAAGGAACTCACACCTAAATGGTATAAAAGGGAACATAATGGGAAAATCCTCCTGGGGTCGCGGCTaGCTCCGCTGCCTAGACCGA +
Preference number: 4 (lower is better)
Translates to: KLRNSHLNGIKGNIMGKSSWGRG*LRCLDR
Trigger: TCGGTCTAGGCAGCGGAGGCAGCCGCGACCCCAGGA...GGATTTTCCCATTATGTTCCCTTTTATACCATTTAGGTGTGAGTTCCTTAGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000271583.7
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR GCA 90 bp CATTTTTGTTGCCCAGACTGGAGGGCAATAAGCATGGTCTCGGCTTACTGCAACACTCAGACACCTAAGTaGTTCTTCAGCATCTCGGGC +
Preference number: 4 (lower is better)
Translates to: HFCCPDWRAISMVSAYCNTQTPK*FFSISG
Trigger: GCCCGAGATGCTGAAGAAGCACTTAGGTGTCTGAGT...GTTGCAGTAAGCCGAGACCATGCTTATTGCCCTCCAGTCTGGGCAACAAAAATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000271583.7
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR GCA 90 bp TTGTTGCCCAGACTGGAGGGCAATAAGCATGGTCTCGGCTTACTGCAACCTCCGGAGTTTCATTTTTGTTaGCCAGACTGGAGGGCAATA +
Preference number: 4 (lower is better)
Translates to: LLPRLEGNKHGLGLLQPPEFHFC*PDWRAI
Trigger: TATTGCCCTCCAGTCTGGGCAACAAAAATGAAACTC...CGGAGGTTGCAGTAAGCCGAGACCATGCTTATTGCCCTCCAGTCTGGGCAACAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000271583.7
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR GCA 90 bp TTGTTGCCCAGACTGGAGGGCAATAAGCATGGTCTCGGCTTACTGCAACCTCCGGCTCTGATTTCAGAATaGTGTCATTTTGCATCCTGG +
Preference number: 4 (lower is better)
Translates to: LLPRLEGNKHGLGLLQPPALISE*CHFASW
Trigger: CCAGGATGCAAAATGACAGCATTCTGAAATCAGAGC...CGGAGGTTGCAGTAAGCCGAGACCATGCTTATTGCCCTCCAGTCTGGGCAACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR GCA 90 bp TTGTTGCCCAGACTGGAGGGCAATAAGCATGGTCTCGGCTTACTGCAACCTCCGACTGCAACAAGTGGATaGGCGGAAAATGAAATCTTC +
Preference number: 4 (lower is better)
Translates to: LLPRLEGNKHGLGLLQPPTATSG*AENEIF
Trigger: GAAGATTTCATTTTCCGCGCATCCACTTGTTGCAGT...CGGAGGTTGCAGTAAGCCGAGACCATGCTTATTGCCCTCCAGTCTGGGCAACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR CCA 90 bp AAGGAACTCACACCTAAATGGTATAAAAGGGAACATAATGGGAAAATCCCTGGTTGCCGGTGGTGGCGATaGCTTCTCGGGGGTGTTGGG +
Preference number: 4 (lower is better)
Translates to: KELTPKWYKREHNGKIPGCRWWR*LLGGVG
Trigger: CCCAACACCCCCGAGAAGCCATCGCCACCACCGGCA...ACCAGGGATTTTCCCATTATGTTCCCTTTTATACCATTTAGGTGTGAGTTCCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000271583.7
ENST00000528443.6
ENST00000606911.7
CDS-3UTR CCA 90 bp AGAAAGGACACAAATCCCTCTCACTGGTCATACCATAACTGTAATAACTCAGCCCCGGGGACCTTTCTTTaGCCACCAGGGGCTCGAAGT +
Preference number: 4 (lower is better)
Translates to: RKDTNPSHWSYHNCNNSAPGTFL*PPGARS
Trigger: ACTTCGAGCCCCTGGTGGCCAAAGAAAGGTCCCCGG...GGCTGAGTTATTACAGTTATGGTATGACCAGTGAGAGGGATTTGTGTCCTTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000271583.7
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR CCA 90 bp GACGTTAAACCACTCTACTACCACTTGTGGAACTCTCAAAGGGTAAATGACAAAATTTCCTCGGTTTCCTaGGGTCGCGGCTGCCTCCGC +
Preference number: 4 (lower is better)
Translates to: DVKPLYYHLWNSQRVNDKISSVS*GRGCLR
Trigger: GCGGAGGCAGCCGCGACCCCAGGAAACCGAGGAAAT...TTTGTCATTTACCCTTTGAGAGTTCCACAAGTGGTAGTAGAGTGGTTTAACGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435319.8
ENST00000606911.7
CDS-3UTR CCA 90 bp TTGTTGCCCAGACTGGAGGGCAATAAGCATGGTCTCGGCTTACTGCAACCTCCGCCATTGCTCAGTTCTTaGTCTACCTCTAGTTTGACA +
Preference number: 4 (lower is better)
Translates to: LLPRLEGNKHGLGLLQPPPLLSS*STSSLT
Trigger: TGTCAAACTAGAGGTAGACCAAGAACTGAGCAATGG...CGGAGGTTGCAGTAAGCCGAGACCATGCTTATTGCCCTCCAGTCTGGGCAACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271583.7
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR CCA 90 bp TTGTTGCCCAGACTGGAGGGCAATAAGCATGGTCTCGGCTTACTGCAACCTCCGGCCATTCAGTTTGTCTaGGTCCATATGATTGTAGGA +
Preference number: 4 (lower is better)
Translates to: LLPRLEGNKHGLGLLQPPAIQFV*VHMIVG
Trigger: TCCTACAATCATATGGACCCAGACAAACTGAATGGC...CGGAGGTTGCAGTAAGCCGAGACCATGCTTATTGCCCTCCAGTCTGGGCAACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271583.7
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR CCA 90 bp TCTTGTATGCTCCTGACAGTTTTCTTTGAGATCGTTTGGCTTAAATCAGTTTGGTCCCTGGCTCGCGGCTaGGACTGTTACCTCCGCGGT +
Preference number: 4 (lower is better)
Translates to: SCMLLTVFFEIVWLKSVWSLARG*DCYLRG
Trigger: ACCGCGGAGGTAACAGTCCCAGCCGCGAGCCAGGGA...CCAAACTGATTTAAGCCAAACGATCTCAAAGAAAACTGTCAGGAGCATACAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529091.5
CDS-3UTR TCA 90 bp TGCACTAGAGGACTTGGACTGCAACAAGTGGATGCGCGGAAAATGAAATCTTCTGCCCGCCATAGTTGTTaGCGTAGCTTTAGTCGATCG +
Preference number: 4 (lower is better)
Translates to: CTRGLGLQQVDARKMKSSARHSC*RSFSRS
Trigger: CGATCGACTAAAGCTACGTCAACAACTATGGCGGGC...AGAAGATTTCATTTTCCGCGCATCCACTTGTTGCAGTCCAAGTCCTCTAGTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528443.6
ENST00000606911.7
CDS-3UTR TCA 90 bp TTTTGTTGCCCAGACTGGAGGGCAATAAGCATGGTCTCGGCTTACTGCAACCTCCTTCTTCAGAGAAATTaGCCTTCTGTTGGACACTGG +
Preference number: 4 (lower is better)
Translates to: FCCPDWRAISMVSAYCNLLLQRN*PSVGHW
Trigger: CCAGTGTCCAACAGAAGGTCAATTTCTCTGAAGAAG...GAGGTTGCAGTAAGCCGAGACCATGCTTATTGCCCTCCAGTCTGGGCAACAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271583.7
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR TCA 90 bp CAAGTGGATGCGCGGAAAATGAAATCTTCTTCAATAGCCCAGGACAGCTGGTTACTGGTCTTGAACTTCTaGCCTCAGGTGATCCACCTG +
Preference number: 4 (lower is better)
Translates to: QVDARKMKSSSIAQDSWLLVLNF*PQVIHL
Trigger: CAGGTGGATCACCTGAGGTCAGAAGTTCAAGACCAG...TAACCAGCTGTCCTGGGCTATTGAAGAAGATTTCATTTTCCGCGCATCCACTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR GCA 90 bp GTAAATCTTTATATTTGCTATGGCGTTGCACTAGAGGACTTGGACTGCAACAAGGACCCTAGGTTCTCCTaGCGGTGGTGGCGATGGCTT +
Preference number: 4 (lower is better)
Translates to: VNLYICYGVALEDLDCNKDPRFS*RWWRWL
Trigger: AAGCCATCGCCACCACCGGCAGGAGAACCTAGGGTC...CTTGTTGCAGTCCAAGTCCTCTAGTGCAACGCCATAGCAAATATAAAGATTTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528443.6
ENST00000606911.7
CDS-3UTR GCA 90 bp TTTTGTTGCCCAGACTGGAGGGCAATAAGCATGGTCTCGGCTTACTGCAACCTCAAGATCTTCACTCACTaGTGGAGCCTCTTGTATGCT +
Preference number: 4 (lower is better)
Translates to: FCCPDWRAISMVSAYCNLKIFTH*WSLLYA
Trigger: AGCATACAAGAGGCTCCAGCAGTGAGTGAAGATCTT...GAGGTTGCAGTAAGCCGAGACCATGCTTATTGCCCTCCAGTCTGGGCAACAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271583.7
ENST00000528443.6
CDS-3UTR CCA 90 bp AAGCTAAGGAACTCACACCTAAATGGTATAAAAGGGAACATAATGGGAAAATCCTGCCGGTGGTGGCGATaGCTTCTCGGGGGTGTTGGG +
Preference number: 4 (lower is better)
Translates to: KLRNSHLNGIKGNIMGKSCRWWR*LLGGVG
Trigger: CCCAACACCCCCGAGAAGCCATCGCCACCACCGGCA...GGATTTTCCCATTATGTTCCCTTTTATACCATTTAGGTGTGAGTTCCTTAGCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000271583.7
ENST00000528443.6
ENST00000606911.7
CDS-3UTR CCA 90 bp AAGGAACTCACACCTAAATGGTATAAAAGGGAACATAATGGGAAAATCCCTGGTTTCTCCTGCCGGTGGTaGCGATGGCTTCTCGGGGGT +
Preference number: 4 (lower is better)
Translates to: KELTPKWYKREHNGKIPGFSCRW*RWLLGG
Trigger: ACCCCCGAGAAGCCATCGCCACCACCGGCAGGAGAA...ACCAGGGATTTTCCCATTATGTTCCCTTTTATACCATTTAGGTGTGAGTTCCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000271583.7
ENST00000528443.6
ENST00000606911.7
CDS-3UTR CCA 90 bp CAAGTGGATGCGCGGAAAATGAAATCTTCTTCAATAGCCCAGGACAGCTGGTTAGCGAAGATGGCTTTATaGACCCTAGGTTCTCCTGCC +
Preference number: 4 (lower is better)
Translates to: QVDARKMKSSSIAQDSWLAKMAL*TLGSPA
Trigger: GGCAGGAGAACCTAGGGTCCATAAAGCCATCTTCGC...TAACCAGCTGTCCTGGGCTATTGAAGAAGATTTCATTTTCCGCGCATCCACTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528443.6
ENST00000606911.7
CDS-3UTR CCA 90 bp TCCTATAGGCAGAAGCTAAGGAACTCACACCTAAATGGTATAAAAGGGAACATAATTTCCTCGGTTTCCTaGGGTCGCGGCTGCCTCCGC +
Preference number: 4 (lower is better)
Translates to: SYRQKLRNSHLNGIKGNIISSVS*GRGCLR
Trigger: GCGGAGGCAGCCGCGACCCCAGGAAACCGAGGAAAT...TATGTTCCCTTTTATACCATTTAGGTGTGAGTTCCTTAGCTTCTGCCTATAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271583.7
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR CCA 90 bp CATAGTAAATCTTTATATTTGCTATGGCGTTGCACTAGAGGACTTGGACTGCAAATTTCCTCGGTTTCCTaGGGTCGCGGCTGCCTCCGC +
Preference number: 4 (lower is better)
Translates to: HSKSLYLLWRCTRGLGLQISSVS*GRGCLR
Trigger: GCGGAGGCAGCCGCGACCCCAGGAAACCGAGGAAAT...TTGCAGTCCAAGTCCTCTAGTGCAACGCCATAGCAAATATAAAGATTTACTATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR CCA 90 bp CAAGTGGATGCGCGGAAAATGAAATCTTCTTCAATAGCCCAGGACAGCTGGTTACAGTCACTTGTCGGCTaGAGGTTGATGGTGACTGGT +
Preference number: 4 (lower is better)
Translates to: QVDARKMKSSSIAQDSWLQSLVG*RLMVTG
Trigger: ACCAGTCACCATCAACCTCCAGCCGACAAGTGACTG...TAACCAGCTGTCCTGGGCTATTGAAGAAGATTTCATTTTCCGCGCATCCACTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR CCA 90 bp TTTTGTTGCCCAGACTGGAGGGCAATAAGCATGGTCTCGGCTTACTGCAACCTCACTCTTGAACAGCAGTaGTTTCTACCTCAGGAGTAC +
Preference number: 4 (lower is better)
Translates to: FCCPDWRAISMVSAYCNLTLEQQ*FLPQEY
Trigger: GTACTCCTGAGGTAGAAACCACTGCTGTTCAAGAGT...GAGGTTGCAGTAAGCCGAGACCATGCTTATTGCCCTCCAGTCTGGGCAACAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271583.7
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR CCA 90 bp TTTTGTTGCCCAGACTGGAGGGCAATAAGCATGGTCTCGGCTTACTGCAACCTCAAGATCTTCACTCACTaGAGCCTCTTGTATGCTCCT +
Preference number: 4 (lower is better)
Translates to: FCCPDWRAISMVSAYCNLKIFTH*SLLYAP
Trigger: AGGAGCATACAAGAGGCTCCAGTGAGTGAAGATCTT...GAGGTTGCAGTAAGCCGAGACCATGCTTATTGCCCTCCAGTCTGGGCAACAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435319.8
ENST00000606911.7
CDS-3UTR TCA 90 bp TTCTCTAAGGAACTGCATATAATCTGCACTCCTAAGATACCTTTAACAGAGCTCTCTGAGTGCTGCTGCTaGAGGCGGGTAGTCCTTCGC +
Preference number: 4 (lower is better)
Translates to: FSKELHIICTPKIPLTELSECCC*RRVVLR
Trigger: GCGAAGGACTACCCGCCTTCAGCAGCAGCACTCAGA...GAGCTCTGTTAAAGGTATCTTAGGAGTGCAGATTATATGCAGTTCCTTAGAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271583.7
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR TCA 90 bp AAGGAACTCACACCTAAATGGTATAAAAGGGAACATAATGGGAAAATCCCTGGTTCTGAGTGCTGCTGCTaGAGGCGGGTAGTCCTTCGC +
Preference number: 4 (lower is better)
Translates to: KELTPKWYKREHNGKIPGSECCC*RRVVLR
Trigger: GCGAAGGACTACCCGCCTTCAGCAGCAGCACTCAGA...ACCAGGGATTTTCCCATTATGTTCCCTTTTATACCATTTAGGTGTGAGTTCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271583.7
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR TCA 90 bp CATTTTTGTTGCCCAGACTGGAGGGCAATAAGCATGGTCTCGGCTTACTGCAACCCTCTTGTATGCTCCTaGCAGTTTTCTTTGAGATCG +
Preference number: 4 (lower is better)
Translates to: HFCCPDWRAISMVSAYCNPLVCS*QFSLRS
Trigger: CGATCTCAAAGAAAACTGTCAGGAGCATACAAGAGG...GTTGCAGTAAGCCGAGACCATGCTTATTGCCCTCCAGTCTGGGCAACAAAAATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000271583.7
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR TCA 90 bp GACGTTAAACCACTCTACTACCACTTGTGGAACTCTCAAAGGGTAAATGACAAAACTTCTGACCTCAGGTaGTCCACCTGCCTTGGCCTG +
Preference number: 4 (lower is better)
Translates to: DVKPLYYHLWNSQRVNDKTSDLR*STCLGL
Trigger: CAGGCCAAGGCAGGTGGATCACCTGAGGTCAGAAGT...TTTGTCATTTACCCTTTGAGAGTTCCACAAGTGGTAGTAGAGTGGTTTAACGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435319.8
ENST00000606911.7
CDS-3UTR GCA 90 bp TTCTCTAAGGAACTGCATATAATCTGCACTCCTAAGATACCTTTAACAGAGCTCCGCCTGCGTCGTCGCTaGTGTGTAGCAAACCTGCCT +
Preference number: 4 (lower is better)
Translates to: FSKELHIICTPKIPLTELRLRRR*CVANLP
Trigger: AGGCAGGTTTGCTACACAGCAGCGACGACGCAGGCG...GAGCTCTGTTAAAGGTATCTTAGGAGTGCAGATTATATGCAGTTCCTTAGAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271583.7
ENST00000528443.6
ENST00000606911.7
CDS-3UTR GCA 90 bp TCCTATAGGCAGAAGCTAAGGAACTCACACCTAAATGGTATAAAAGGGAACATACGCCTGCGTCGTCGCTaGTGTGTAGCAAACCTGCCT +
Preference number: 4 (lower is better)
Translates to: SYRQKLRNSHLNGIKGNIRLRRR*CVANLP
Trigger: AGGCAGGTTTGCTACACAGCAGCGACGACGCAGGCG...TATGTTCCCTTTTATACCATTTAGGTGTGAGTTCCTTAGCTTCTGCCTATAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271583.7
ENST00000528443.6
ENST00000606911.7
CDS-3UTR GCA 90 bp TTTTGTTGCCCAGACTGGAGGGCAATAAGCATGGTCTCGGCTTACTGCAACCTCATCAGTTTGGGAAGATaGTTCATCCTCTTCAGAGGA +
Preference number: 4 (lower is better)
Translates to: FCCPDWRAISMVSAYCNLISLGR*FILFRG
Trigger: TCCTCTGAAGAGGATGAAGCATCTTCCCAAACTGAT...GAGGTTGCAGTAAGCCGAGACCATGCTTATTGCCCTCCAGTCTGGGCAACAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271583.7
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR GCA 90 bp CAAGTGGATGCGCGGAAAATGAAATCTTCTTCAATAGCCCAGGACAGCTGGTTACCTGGTCCTTATTCTTaGAGTTTGTGGGGCCCATTC +
Preference number: 4 (lower is better)
Translates to: QVDARKMKSSSIAQDSWLPGPYS*SLWGPF
Trigger: GAATGGGCCCCACAAACTGCAAGAATAAGGACCAGG...TAACCAGCTGTCCTGGGCTATTGAAGAAGATTTCATTTTCCGCGCATCCACTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR CCA 90 bp AACTCACACCTAAATGGTATAAAAGGGAACATAATGGGAAAATCCCTGGTTACATTCTCCTGCCGGTGGTaGCGATGGCTTCTCGGGGGT +
Preference number: 4 (lower is better)
Translates to: NSHLNGIKGNIMGKSLVTFSCRW*RWLLGG
Trigger: ACCCCCGAGAAGCCATCGCCACCACCGGCAGGAGAA...TGTAACCAGGGATTTTCCCATTATGTTCCCTTTTATACCATTTAGGTGTGAGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000271583.7
ENST00000528443.6
ENST00000606911.7
CDS-3UTR CCA 90 bp AAGCTAAGGAACTCACACCTAAATGGTATAAAAGGGAACATAATGGGAAAATCCTTCTCCTGCCGGTGGTaGCGATGGCTTCTCGGGGGT +
Preference number: 4 (lower is better)
Translates to: KLRNSHLNGIKGNIMGKSFSCRW*RWLLGG
Trigger: ACCCCCGAGAAGCCATCGCCACCACCGGCAGGAGAA...GGATTTTCCCATTATGTTCCCTTTTATACCATTTAGGTGTGAGTTCCTTAGCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000271583.7
ENST00000528443.6
ENST00000606911.7
CDS-3UTR CCA 90 bp AACTCACACCTAAATGGTATAAAAGGGAACATAATGGGAAAATCCCTGGTTACAAGGTTCTCCTGCCGGTaGTGGCGATGGCTTCTCGGG +
Preference number: 4 (lower is better)
Translates to: NSHLNGIKGNIMGKSLVTRFSCR*WRWLLG
Trigger: CCCGAGAAGCCATCGCCACCACCGGCAGGAGAACCT...TGTAACCAGGGATTTTCCCATTATGTTCCCTTTTATACCATTTAGGTGTGAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271583.7
ENST00000528443.6
ENST00000606911.7
CDS-3UTR CCA 90 bp TCCTATAGGCAGAAGCTAAGGAACTCACACCTAAATGGTATAAAAGGGAACATAGTCGCCGTACACTTCTaGCGGCTCGTCCGAGAACCT +
Preference number: 4 (lower is better)
Translates to: SYRQKLRNSHLNGIKGNIVAVHF*RLVREP
Trigger: AGGTTCTCGGACGAGCCGCCAGAAGTGTACGGCGAC...TATGTTCCCTTTTATACCATTTAGGTGTGAGTTCCTTAGCTTCTGCCTATAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271583.7
ENST00000528443.6
ENST00000606911.7
CDS-3UTR CCA 90 bp CATAGTAAATCTTTATATTTGCTATGGCGTTGCACTAGAGGACTTGGACTGCAACCGGGGACCTTTCTTTaGCCACCAGGGGCTCGAAGT +
Preference number: 4 (lower is better)
Translates to: HSKSLYLLWRCTRGLGLQPGTFL*PPGARS
Trigger: ACTTCGAGCCCCTGGTGGCCAAAGAAAGGTCCCCGG...TTGCAGTCCAAGTCCTCTAGTGCAACGCCATAGCAAATATAAAGATTTACTATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR CCA 90 bp TTGTTGCCCAGACTGGAGGGCAATAAGCATGGTCTCGGCTTACTGCAACCTCCGTCTTTATATTTGCTATaGCGTTGCACTAGAGGACTT +
Preference number: 4 (lower is better)
Translates to: LLPRLEGNKHGLGLLQPPSLYLL*RCTRGL
Trigger: AAGTCCTCTAGTGCAACGCCATAGCAAATATAAAGA...CGGAGGTTGCAGTAAGCCGAGACCATGCTTATTGCCCTCCAGTCTGGGCAACAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR CCA 90 bp CTTGGGTATCTTAGAGGGGGTCGACGTAACCTGATTACAAGATCTTCACTCACTAAAGTGGCAGATTTTTaGCAGGGACCACCACACCAG +
Preference number: 4 (lower is better)
Translates to: LGYLRGGRRNLITRSSLTKVADF*QGPPHQ
Trigger: CTGGTGTGGTGGTCCCTGCCAAAAATCTGCCACTTT...AGTGAGTGAAGATCTTGTAATCAGGTTACGTCGACCCCCTCTAAGATACCCAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000529091.5
CDS-3UTR CCA 90 bp AACTCACACCTAAATGGTATAAAAGGGAACATAATGGGAAAATCCCTGGTTACAATCGCTCCCGCCTCCTaGCTGGAGGCACCAAAGAGG +
Preference number: 4 (lower is better)
Translates to: NSHLNGIKGNIMGKSLVTIAPAS*LEAPKR
Trigger: CCTCTTTGGTGCCTCCAGCCAGGAGGCGGGAGCGAT...TGTAACCAGGGATTTTCCCATTATGTTCCCTTTTATACCATTTAGGTGTGAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528443.6
CDS-3UTR CCA 90 bp AAGGAACTCACACCTAAATGGTATAAAAGGGAACATAATGGGAAAATCCCTGGTCTGCCTCTGGGCCCATaGTGTGTCTTGAGGGCTGTG +
Preference number: 4 (lower is better)
Translates to: KELTPKWYKREHNGKIPGLPLGP*CVLRAV
Trigger: CACAGCCCTCAAGACACACCATGGGCCCAGAGGCAG...ACCAGGGATTTTCCCATTATGTTCCCTTTTATACCATTTAGGTGTGAGTTCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000528443.6
ENST00000606911.7
CDS-3UTR CCA 90 bp TCCTATAGGCAGAAGCTAAGGAACTCACACCTAAATGGTATAAAAGGGAACATACTGCCTCTGGGCCCATaGTGTGTCTTGAGGGCTGTG +
Preference number: 4 (lower is better)
Translates to: SYRQKLRNSHLNGIKGNILPLGP*CVLRAV
Trigger: CACAGCCCTCAAGACACACCATGGGCCCAGAGGCAG...TATGTTCCCTTTTATACCATTTAGGTGTGAGTTCCTTAGCTTCTGCCTATAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528443.6
ENST00000606911.7
CDS-3UTR TCA 90 bp TCCTATAGGCAGAAGCTAAGGAACTCACACCTAAATGGTATAAAAGGGAACATATCCTCTTCAGAGGAATaGGAGTCCCGCAGCCCTCTC +
Preference number: 4 (lower is better)
Translates to: SYRQKLRNSHLNGIKGNISSSEE*ESRSPL
Trigger: GAGAGGGCTGCGGGACTCTCATTCCTCTGAAGAGGA...TATGTTCCCTTTTATACCATTTAGGTGTGAGTTCCTTAGCTTCTGCCTATAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271583.7
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR TCA 90 bp GGATCTGGCCTTAACAGTAGTGACACTGCTGTGAGAGCTGTCTTGATCATCTTCCCTCTTGTATGCTCCTaGCAGTTTTCTTTGAGATCG +
Preference number: 4 (lower is better)
Translates to: GSGLNSSDTAVRAVLIIFPLVCS*QFSLRS
Trigger: CGATCTCAAAGAAAACTGTCAGGAGCATACAAGAGG...GAAGATGATCAAGACAGCTCTCACAGCAGTGTCACTACTGTTAAGGCCAGATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529091.5
CDS-3UTR TCA 90 bp TGCACTAGAGGACTTGGACTGCAACAAGTGGATGCGCGGAAAATGAAATCTTCTGGGGTCGACGTAACCTaGTTACAAGATCTTCACTCA +
Preference number: 4 (lower is better)
Translates to: CTRGLGLQQVDARKMKSSGVDVT*LQDLHS
Trigger: TGAGTGAAGATCTTGTAATCAGGTTACGTCGACCCC...AGAAGATTTCATTTTCCGCGCATCCACTTGTTGCAGTCCAAGTCCTCTAGTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR TCA 90 bp CAAGTGGATGCGCGGAAAATGAAATCTTCTTCAATAGCCCAGGACAGCTGGTTAGGGGTCGACGTAACCTaGTTACAAGATCTTCACTCA +
Preference number: 4 (lower is better)
Translates to: QVDARKMKSSSIAQDSWLGVDVT*LQDLHS
Trigger: TGAGTGAAGATCTTGTAATCAGGTTACGTCGACCCC...TAACCAGCTGTCCTGGGCTATTGAAGAAGATTTCATTTTCCGCGCATCCACTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR TCA 90 bp TGCACTAGAGGACTTGGACTGCAACAAGTGGATGCGCGGAAAATGAAATCTTCTACCACCGGTTCCTCTTaGCAAAAGATGCATTTTGGG +
Preference number: 4 (lower is better)
Translates to: CTRGLGLQQVDARKMKSSTTGSS*QKMHFG
Trigger: CCCAAAATGCATCTTTTGTCAAGAGGAACCGGTGGT...AGAAGATTTCATTTTCCGCGCATCCACTTGTTGCAGTCCAAGTCCTCTAGTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR TCA 90 bp CATTTTTGTTGCCCAGACTGGAGGGCAATAAGCATGGTCTCGGCTTACTGCAACACAGTATCACTGTCTTaGGTAGCTTTATCTGTCCCA +
Preference number: 4 (lower is better)
Translates to: HFCCPDWRAISMVSAYCNTVSLS*VALSVP
Trigger: TGGGACAGATAAAGCTACTCAAGACAGTGATACTGT...GTTGCAGTAAGCCGAGACCATGCTTATTGCCCTCCAGTCTGGGCAACAAAAATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000271583.7
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR TCA 90 bp CAAGTGGATGCGCGGAAAATGAAATCTTCTTCAATAGCCCAGGACAGCTGGTTACTAAGGCTACATCTTTaGAGGCCGCGTTTTCATGGT +
Preference number: 4 (lower is better)
Translates to: QVDARKMKSSSIAQDSWLLRLHL*RPRFHG
Trigger: ACCATGAAAACGCGGCCTTCAAAGATGTAGCCTTAG...TAACCAGCTGTCCTGGGCTATTGAAGAAGATTTCATTTTCCGCGCATCCACTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR TCA 90 bp TTCTCTAAGGAACTGCATATAATCTGCACTCCTAAGATACCTTTAACAGAGCTCACTTCTGACCTCAGGTaGTCCACCTGCCTTGGCCTG +
Preference number: 4 (lower is better)
Translates to: FSKELHIICTPKIPLTELTSDLR*STCLGL
Trigger: CAGGCCAAGGCAGGTGGATCACCTGAGGTCAGAAGT...GAGCTCTGTTAAAGGTATCTTAGGAGTGCAGATTATATGCAGTTCCTTAGAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271583.7
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR TCA 90 bp AGAAAGGACACAAATCCCTCTCACTGGTCATACCATAACTGTAATAACTCAGCCCTGGTCTTGAACTTCTaGCCTCAGGTGATCCACCTG +
Preference number: 4 (lower is better)
Translates to: RKDTNPSHWSYHNCNNSALVLNF*PQVIHL
Trigger: CAGGTGGATCACCTGAGGTCAGAAGTTCAAGACCAG...GGCTGAGTTATTACAGTTATGGTATGACCAGTGAGAGGGATTTGTGTCCTTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271583.7
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR TCA 90 bp AAGGAACTCACACCTAAATGGTATAAAAGGGAACATAATGGGAAAATCCCTGGTGCTCGTGGCAAGTGTTaGCTGCGTGTAGGAGACTCC +
Preference number: 4 (lower is better)
Translates to: KELTPKWYKREHNGKIPGARGKC*LRVGDS
Trigger: GGAGTCTCCTACACGCAGTCAACACTTGCCACGAGC...ACCAGGGATTTTCCCATTATGTTCCCTTTTATACCATTTAGGTGTGAGTTCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528443.6
CDS-3UTR GCA 90 bp CATTTTTGTTGCCCAGACTGGAGGGCAATAAGCATGGTCTCGGCTTACTGCAACATCAGTTTGGGAAGATaGTTCATCCTCTTCAGAGGA +
Preference number: 4 (lower is better)
Translates to: HFCCPDWRAISMVSAYCNISLGR*FILFRG
Trigger: TCCTCTGAAGAGGATGAAGCATCTTCCCAAACTGAT...GTTGCAGTAAGCCGAGACCATGCTTATTGCCCTCCAGTCTGGGCAACAAAAATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000271583.7
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR GCA 90 bp AGAAAGGACACAAATCCCTCTCACTGGTCATACCATAACTGTAATAACTCAGCCCTAGAGGACTTGGACTaGAACAAGTGGATGCGCGGA +
Preference number: 4 (lower is better)
Translates to: RKDTNPSHWSYHNCNNSALEDLD*NKWMRG
Trigger: TCCGCGCATCCACTTGTTGCAGTCCAAGTCCTCTAG...GGCTGAGTTATTACAGTTATGGTATGACCAGTGAGAGGGATTTGTGTCCTTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR CCA 90 bp AACTCACACCTAAATGGTATAAAAGGGAACATAATGGGAAAATCCCTGGTTACAGTCGCCGTACACTTCTaGCGGCTCGTCCGAGAACCT +
Preference number: 4 (lower is better)
Translates to: NSHLNGIKGNIMGKSLVTVAVHF*RLVREP
Trigger: AGGTTCTCGGACGAGCCGCCAGAAGTGTACGGCGAC...TGTAACCAGGGATTTTCCCATTATGTTCCCTTTTATACCATTTAGGTGTGAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271583.7
ENST00000528443.6
ENST00000606911.7
CDS-3UTR CCA 90 bp TTGTTGCCCAGACTGGAGGGCAATAAGCATGGTCTCGGCTTACTGCAACCTCCGTTCTTTGAGATCGTTTaGCTTAAATCAGTTTGGGAA +
Preference number: 4 (lower is better)
Translates to: LLPRLEGNKHGLGLLQPPFFEIV*LKSVWE
Trigger: TTCCCAAACTGATTTAAGCCAAACGATCTCAAAGAA...CGGAGGTTGCAGTAAGCCGAGACCATGCTTATTGCCCTCCAGTCTGGGCAACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271583.7
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR CCA 90 bp TTTTGTTGCCCAGACTGGAGGGCAATAAGCATGGTCTCGGCTTACTGCAACCTCAAATTGACCTTCTGTTaGACACTGGTGGCTTCATAT +
Preference number: 4 (lower is better)
Translates to: FCCPDWRAISMVSAYCNLKLTFC*TLVASY
Trigger: ATATGAAGCCACCAGTGTCCAACAGAAGGTCAATTT...GAGGTTGCAGTAAGCCGAGACCATGCTTATTGCCCTCCAGTCTGGGCAACAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271583.7
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR CCA 90 bp CATTTTTGTTGCCCAGACTGGAGGGCAATAAGCATGGTCTCGGCTTACTGCAACCCATTGCTCAGTTCTTaGTCTACCTCTAGTTTGACA +
Preference number: 4 (lower is better)
Translates to: HFCCPDWRAISMVSAYCNPLLSS*STSSLT
Trigger: TGTCAAACTAGAGGTAGACCAAGAACTGAGCAATGG...GTTGCAGTAAGCCGAGACCATGCTTATTGCCCTCCAGTCTGGGCAACAAAAATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000271583.7
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR CCA 90 bp CATTTTTGTTGCCCAGACTGGAGGGCAATAAGCATGGTCTCGGCTTACTGCAACACCACAGCTGCATTCTaGCCATTCTTAAATCCATTG +
Preference number: 4 (lower is better)
Translates to: HFCCPDWRAISMVSAYCNTTAAF*PFLNPL
Trigger: CAATGGATTTAAGAATGGCCAGAATGCAGCTGTGGT...GTTGCAGTAAGCCGAGACCATGCTTATTGCCCTCCAGTCTGGGCAACAAAAATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000271583.7
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR CCA 90 bp TTGTTGCCCAGACTGGAGGGCAATAAGCATGGTCTCGGCTTACTGCAACCTCCGTCTGAATTCTGTCTCTaGTTAGAAAGTGTGAACAAT +
Preference number: 4 (lower is better)
Translates to: LLPRLEGNKHGLGLLQPPSEFCL*LESVNN
Trigger: ATTGTTCACACTTTCTAACCAGAGACAGAATTCAGA...CGGAGGTTGCAGTAAGCCGAGACCATGCTTATTGCCCTCCAGTCTGGGCAACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271583.7
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR CCA 90 bp TGCACTAGAGGACTTGGACTGCAACAAGTGGATGCGCGGAAAATGAAATCTTCTTTTTGTTGCCCAGACTaGAGGGCAATAAGCATGGTC +
Preference number: 4 (lower is better)
Translates to: CTRGLGLQQVDARKMKSSFCCPD*RAISMV
Trigger: GACCATGCTTATTGCCCTCCAGTCTGGGCAACAAAA...AGAAGATTTCATTTTCCGCGCATCCACTTGTTGCAGTCCAAGTCCTCTAGTGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR CCA 90 bp CTGGTGGCTTCATATCTTGGGTATCTTAGAGGGGGTCGACGTAACCTGATTACAAAGATCTTCACTCACTaGAGCCTCTTGTATGCTCCT +
Preference number: 4 (lower is better)
Translates to: LVASYLGYLRGGRRNLITKIFTH*SLLYAP
Trigger: AGGAGCATACAAGAGGCTCCAGTGAGTGAAGATCTT...TGTAATCAGGTTACGTCGACCCCCTCTAAGATACCCAAGATATGAAGCCACCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000529091.5
CDS-3UTR TCA 90 bp AACTCACACCTAAATGGTATAAAAGGGAACATAATGGGAAAATCCCTGGTTACATCCTCTTCAGAGGAATaGGAGTCCCGCAGCCCTCTC +
Preference number: 4 (lower is better)
Translates to: NSHLNGIKGNIMGKSLVTSSSEE*ESRSPL
Trigger: GAGAGGGCTGCGGGACTCTCATTCCTCTGAAGAGGA...TGTAACCAGGGATTTTCCCATTATGTTCCCTTTTATACCATTTAGGTGTGAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271583.7
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR TCA 90 bp AAGCTAAGGAACTCACACCTAAATGGTATAAAAGGGAACATAATGGGAAAATCCTCCTCTTCAGAGGAATaGGAGTCCCGCAGCCCTCTC +
Preference number: 4 (lower is better)
Translates to: KLRNSHLNGIKGNIMGKSSSSEE*ESRSPL
Trigger: GAGAGGGCTGCGGGACTCTCATTCCTCTGAAGAGGA...GGATTTTCCCATTATGTTCCCTTTTATACCATTTAGGTGTGAGTTCCTTAGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271583.7
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR TCA 90 bp GCTTCATATCTTGGGTATCTTAGAGGGGGTCGACGTAACCTGATTACAAGATCTGGGGTCGACGTAACCTaGTTACAAGATCTTCACTCA +
Preference number: 4 (lower is better)
Translates to: ASYLGYLRGGRRNLITRSGVDVT*LQDLHS
Trigger: TGAGTGAAGATCTTGTAATCAGGTTACGTCGACCCC...AGATCTTGTAATCAGGTTACGTCGACCCCCTCTAAGATACCCAAGATATGAAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000529091.5
CDS-3UTR TCA 90 bp GTAAATCTTTATATTTGCTATGGCGTTGCACTAGAGGACTTGGACTGCAACAAGAGTAAGATAGCAGGCTaGGACCGAGGATGGGAGCTA +
Preference number: 4 (lower is better)
Translates to: VNLYICYGVALEDLDCNKSKIAG*DRGWEL
Trigger: TAGCTCCCATCCTCGGTCTCAGCCTGCTATCTTACT...CTTGTTGCAGTCCAAGTCCTCTAGTGCAACGCCATAGCAAATATAAAGATTTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR TCA 90 bp AAGGAACTCACACCTAAATGGTATAAAAGGGAACATAATGGGAAAATCCCTGGTAGAGCCTGCGGGAAATaGCTCAAAGCGGTGTACCAC +
Preference number: 4 (lower is better)
Translates to: KELTPKWYKREHNGKIPGRACGK*LKAVYH
Trigger: GTGGTACACCGCTTTGAGTCATTTCCCGCAGGCTCT...ACCAGGGATTTTCCCATTATGTTCCCTTTTATACCATTTAGGTGTGAGTTCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271583.7
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR TCA 90 bp TTCTCTAAGGAACTGCATATAATCTGCACTCCTAAGATACCTTTAACAGAGCTCAGAGCCTGCGGGAAATaGCTCAAAGCGGTGTACCAC +
Preference number: 4 (lower is better)
Translates to: FSKELHIICTPKIPLTELRACGK*LKAVYH
Trigger: GTGGTACACCGCTTTGAGTCATTTCCCGCAGGCTCT...GAGCTCTGTTAAAGGTATCTTAGGAGTGCAGATTATATGCAGTTCCTTAGAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271583.7
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR TCA 90 bp AGAAAGGACACAAATCCCTCTCACTGGTCATACCATAACTGTAATAACTCAGCCACAGGCAGAACTAAGTaGGAAATACGGCTCCAGAGG +
Preference number: 4 (lower is better)
Translates to: RKDTNPSHWSYHNCNNSATGRTK*EIRLQR
Trigger: CCTCTGGAGCCGTATTTCTCACTTAGTTCTGCCTGT...GGCTGAGTTATTACAGTTATGGTATGACCAGTGAGAGGGATTTGTGTCCTTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271583.7
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR TCA 90 bp AAGCTAAGGAACTCACACCTAAATGGTATAAAAGGGAACATAATGGGAAAATCCACTTCTGACCTCAGGTaGTCCACCTGCCTTGGCCTG +
Preference number: 4 (lower is better)
Translates to: KLRNSHLNGIKGNIMGKSTSDLR*STCLGL
Trigger: CAGGCCAAGGCAGGTGGATCACCTGAGGTCAGAAGT...GGATTTTCCCATTATGTTCCCTTTTATACCATTTAGGTGTGAGTTCCTTAGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271583.7
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR TCA 90 bp GTAAATCTTTATATTTGCTATGGCGTTGCACTAGAGGACTTGGACTGCAACAAGCTGGTCTTGAACTTCTaGCCTCAGGTGATCCACCTG +
Preference number: 4 (lower is better)
Translates to: VNLYICYGVALEDLDCNKLVLNF*PQVIHL
Trigger: CAGGTGGATCACCTGAGGTCAGAAGTTCAAGACCAG...CTTGTTGCAGTCCAAGTCCTCTAGTGCAACGCCATAGCAAATATAAAGATTTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR GCA 90 bp AGAAAGGACACAAATCCCTCTCACTGGTCATACCATAACTGTAATAACTCAGCCCCTGGTCCTTATTCTTaGAGTTTGTGGGGCCCATTC +
Preference number: 4 (lower is better)
Translates to: RKDTNPSHWSYHNCNNSAPGPYS*SLWGPF
Trigger: GAATGGGCCCCACAAACTGCAAGAATAAGGACCAGG...GGCTGAGTTATTACAGTTATGGTATGACCAGTGAGAGGGATTTGTGTCCTTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271583.7
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR GCA 90 bp AGAAAGGACACAAATCCCTCTCACTGGTCATACCATAACTGTAATAACTCAGCCACTCAGACACCTAAGTaGTTCTTCAGCATCTCGGGC +
Preference number: 4 (lower is better)
Translates to: RKDTNPSHWSYHNCNNSATQTPK*FFSISG
Trigger: GCCCGAGATGCTGAAGAAGCACTTAGGTGTCTGAGT...GGCTGAGTTATTACAGTTATGGTATGACCAGTGAGAGGGATTTGTGTCCTTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271583.7
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR CCA 90 bp TCACTCACTGGAGCCTCTTGTATGCTCCTGACAGTTTTCTTTGAGATCGTTTGGTCTGTTGGACACTGGTaGCTTCATATCTTGGGTATC +
Preference number: 4 (lower is better)
Translates to: SLTGASCMLLTVFFEIVWSVGHW*LHILGI
Trigger: GATACCCAAGATATGAAGCCACCAGTGTCCAACAGA...CCAAACGATCTCAAAGAAAACTGTCAGGAGCATACAAGAGGCTCCAGTGAGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529091.5
CDS-3UTR CCA 90 bp TGCACTAGAGGACTTGGACTGCAACAAGTGGATGCGCGGAAAATGAAATCTTCTTCTGTTGGACACTGGTaGCTTCATATCTTGGGTATC +
Preference number: 4 (lower is better)
Translates to: CTRGLGLQQVDARKMKSSSVGHW*LHILGI
Trigger: GATACCCAAGATATGAAGCCACCAGTGTCCAACAGA...AGAAGATTTCATTTTCCGCGCATCCACTTGTTGCAGTCCAAGTCCTCTAGTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR CCA 90 bp GCTTCATATCTTGGGTATCTTAGAGGGGGTCGACGTAACCTGATTACAAGATCTCCTTCTGTTGGACACTaGTGGCTTCATATCTTGGGT +
Preference number: 4 (lower is better)
Translates to: ASYLGYLRGGRRNLITRSPSVGH*WLHILG
Trigger: ACCCAAGATATGAAGCCACCAGTGTCCAACAGAAGG...AGATCTTGTAATCAGGTTACGTCGACCCCCTCTAAGATACCCAAGATATGAAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000529091.5
CDS-3UTR CCA 90 bp AGAAAGGACACAAATCCCTCTCACTGGTCATACCATAACTGTAATAACTCAGCCTATTCTTGCAGTTTGTaGGGCCCATTCCTGGGGAGT +
Preference number: 4 (lower is better)
Translates to: RKDTNPSHWSYHNCNNSAYSCSL*GPFLGS
Trigger: ACTCCCCAGGAATGGGCCCCACAAACTGCAAGAATA...GGCTGAGTTATTACAGTTATGGTATGACCAGTGAGAGGGATTTGTGTCCTTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271583.7
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR CCA 90 bp TGCACTAGAGGACTTGGACTGCAACAAGTGGATGCGCGGAAAATGAAATCTTCTACTCTTGAACAGCAGTaGTTTCTACCTCAGGAGTAC +
Preference number: 4 (lower is better)
Translates to: CTRGLGLQQVDARKMKSSTLEQQ*FLPQEY
Trigger: GTACTCCTGAGGTAGAAACCACTGCTGTTCAAGAGT...AGAAGATTTCATTTTCCGCGCATCCACTTGTTGCAGTCCAAGTCCTCTAGTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR TCA 90 bp TCCTATAGGCAGAAGCTAAGGAACTCACACCTAAATGGTATAAAAGGGAACATAGCCCGCCATAGTTGTTaGCGTAGCTTTAGTCGATCG +
Preference number: 4 (lower is better)
Translates to: SYRQKLRNSHLNGIKGNIARHSC*RSFSRS
Trigger: CGATCGACTAAAGCTACGTCAACAACTATGGCGGGC...TATGTTCCCTTTTATACCATTTAGGTGTGAGTTCCTTAGCTTCTGCCTATAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271583.7
ENST00000528443.6
ENST00000606911.7
CDS-3UTR TCA 90 bp AGAAAGGACACAAATCCCTCTCACTGGTCATACCATAACTGTAATAACTCAGCCACCACCGGTTCCTCTTaGCAAAAGATGCATTTTGGG +
Preference number: 4 (lower is better)
Translates to: RKDTNPSHWSYHNCNNSATTGSS*QKMHFG
Trigger: CCCAAAATGCATCTTTTGTCAAGAGGAACCGGTGGT...GGCTGAGTTATTACAGTTATGGTATGACCAGTGAGAGGGATTTGTGTCCTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271583.7
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR TCA 90 bp TTCTCTAAGGAACTGCATATAATCTGCACTCCTAAGATACCTTTAACAGAGCTCAGTAAGATAGCAGGCTaGGACCGAGGATGGGAGCTA +
Preference number: 4 (lower is better)
Translates to: FSKELHIICTPKIPLTELSKIAG*DRGWEL
Trigger: TAGCTCCCATCCTCGGTCTCAGCCTGCTATCTTACT...GAGCTCTGTTAAAGGTATCTTAGGAGTGCAGATTATATGCAGTTCCTTAGAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271583.7
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR TCA 90 bp AAGGAACTCACACCTAAATGGTATAAAAGGGAACATAATGGGAAAATCCCTGGTAGTAAGATAGCAGGCTaGGACCGAGGATGGGAGCTA +
Preference number: 4 (lower is better)
Translates to: KELTPKWYKREHNGKIPGSKIAG*DRGWEL
Trigger: TAGCTCCCATCCTCGGTCTCAGCCTGCTATCTTACT...ACCAGGGATTTTCCCATTATGTTCCCTTTTATACCATTTAGGTGTGAGTTCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271583.7
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR TCA 90 bp TCTTGTATGCTCCTGACAGTTTTCTTTGAGATCGTTTGGCTTAAATCAGTTTGGTACTTGAGGTTACAGTaGCGGCCACCAAAGTGGCAG +
Preference number: 4 (lower is better)
Translates to: SCMLLTVFFEIVWLKSVWYLRLQ*RPPKWQ
Trigger: CTGCCACTTTGGTGGCCGTCACTGTAACCTCAAGTA...CCAAACTGATTTAAGCCAAACGATCTCAAAGAAAACTGTCAGGAGCATACAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529091.5
CDS-3UTR TCA 90 bp CTTGGGTATCTTAGAGGGGGTCGACGTAACCTGATTACAAGATCTTCACTCACTGTTACTTTGTCAGTCTaGTTTGCCAGACTACTTGAG +
Preference number: 4 (lower is better)
Translates to: LGYLRGGRRNLITRSSLTVTLSV*FARLLE
Trigger: CTCAAGTAGTCTGGCAAATCAGACTGACAAAGTAAC...AGTGAGTGAAGATCTTGTAATCAGGTTACGTCGACCCCCTCTAAGATACCCAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000529091.5
CDS-3UTR GCA 90 bp TTTTGTTGCCCAGACTGGAGGGCAATAAGCATGGTCTCGGCTTACTGCAACCTCGAACTGCATATAATCTaGACTCCTAAGATACCTTTA +
Preference number: 4 (lower is better)
Translates to: FCCPDWRAISMVSAYCNLELHII*TPKIPL
Trigger: TAAAGGTATCTTAGGAGTGCAGATTATATGCAGTTC...GAGGTTGCAGTAAGCCGAGACCATGCTTATTGCCCTCCAGTCTGGGCAACAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271583.7
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR GCA 90 bp CATTTTTGTTGCCCAGACTGGAGGGCAATAAGCATGGTCTCGGCTTACTGCAACAGAATGCTGTCATTTTaGATCCTGGTCCTTATTCTT +
Preference number: 4 (lower is better)
Translates to: HFCCPDWRAISMVSAYCNRMLSF*ILVLIL
Trigger: AAGAATAAGGACCAGGATGCAAAATGACAGCATTCT...GTTGCAGTAAGCCGAGACCATGCTTATTGCCCTCCAGTCTGGGCAACAAAAATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR CCA 90 bp TTTTGTTGCCCAGACTGGAGGGCAATAAGCATGGTCTCGGCTTACTGCAACCTCTTCTTTGAGATCGTTTaGCTTAAATCAGTTTGGGAA +
Preference number: 4 (lower is better)
Translates to: FCCPDWRAISMVSAYCNLFFEIV*LKSVWE
Trigger: TTCCCAAACTGATTTAAGCCAAACGATCTCAAAGAA...GAGGTTGCAGTAAGCCGAGACCATGCTTATTGCCCTCCAGTCTGGGCAACAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271583.7
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR CCA 90 bp AGAAAGGACACAAATCCCTCTCACTGGTCATACCATAACTGTAATAACTCAGCCATCTTCACTCACTGCTaGAGCCTCTTGTATGCTCCT +
Preference number: 4 (lower is better)
Translates to: RKDTNPSHWSYHNCNNSAIFTHC*SLLYAP
Trigger: AGGAGCATACAAGAGGCTCCAGCAGTGAGTGAAGAT...GGCTGAGTTATTACAGTTATGGTATGACCAGTGAGAGGGATTTGTGTCCTTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271583.7
ENST00000528443.6
CDS-3UTR CCA 90 bp AGAAAGGACACAAATCCCTCTCACTGGTCATACCATAACTGTAATAACTCAGCCCCTTCTGTTGGACACTaGTGGCTTCATATCTTGGGT +
Preference number: 4 (lower is better)
Translates to: RKDTNPSHWSYHNCNNSAPSVGH*WLHILG
Trigger: ACCCAAGATATGAAGCCACCAGTGTCCAACAGAAGG...GGCTGAGTTATTACAGTTATGGTATGACCAGTGAGAGGGATTTGTGTCCTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271583.7
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR CCA 90 bp TGCACTAGAGGACTTGGACTGCAACAAGTGGATGCGCGGAAAATGAAATCTTCTCCATTGCTCAGTTCTTaGTCTACCTCTAGTTTGACA +
Preference number: 4 (lower is better)
Translates to: CTRGLGLQQVDARKMKSSPLLSS*STSSLT
Trigger: TGTCAAACTAGAGGTAGACCAAGAACTGAGCAATGG...AGAAGATTTCATTTTCCGCGCATCCACTTGTTGCAGTCCAAGTCCTCTAGTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR CCA 90 bp CAAGTGGATGCGCGGAAAATGAAATCTTCTTCAATAGCCCAGGACAGCTGGTTAACCACAGCTGCATTCTaGCCATTCTTAAATCCATTG +
Preference number: 4 (lower is better)
Translates to: QVDARKMKSSSIAQDSWLTTAAF*PFLNPL
Trigger: CAATGGATTTAAGAATGGCCAGAATGCAGCTGTGGT...TAACCAGCTGTCCTGGGCTATTGAAGAAGATTTCATTTTCCGCGCATCCACTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR CCA 90 bp CATTTTTGTTGCCCAGACTGGAGGGCAATAAGCATGGTCTCGGCTTACTGCAACTGTCATTTTGCATCCTaGTCCTTATTCTTGCAGTTT +
Preference number: 4 (lower is better)
Translates to: HFCCPDWRAISMVSAYCNCHFAS*SLFLQF
Trigger: AAACTGCAAGAATAAGGACCAGGATGCAAAATGACA...GTTGCAGTAAGCCGAGACCATGCTTATTGCCCTCCAGTCTGGGCAACAAAAATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR CCA 90 bp CAAGTGGATGCGCGGAAAATGAAATCTTCTTCAATAGCCCAGGACAGCTGGTTAATAGCCCAGGACAGCTaGTTAACAAATGGTTTGTCA +
Preference number: 4 (lower is better)
Translates to: QVDARKMKSSSIAQDSWLIAQDS*LTNGLS
Trigger: TGACAAACCATTTGTTAACCAGCTGTCCTGGGCTAT...TAACCAGCTGTCCTGGGCTATTGAAGAAGATTTCATTTTCCGCGCATCCACTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR CCA 90 bp CATTTTTGTTGCCCAGACTGGAGGGCAATAAGCATGGTCTCGGCTTACTGCAACTCTTTATATTTGCTATaGCGTTGCACTAGAGGACTT +
Preference number: 4 (lower is better)
Translates to: HFCCPDWRAISMVSAYCNSLYLL*RCTRGL
Trigger: AAGTCCTCTAGTGCAACGCCATAGCAAATATAAAGA...GTTGCAGTAAGCCGAGACCATGCTTATTGCCCTCCAGTCTGGGCAACAAAAATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR TCA 90 bp AGAAAGGACACAAATCCCTCTCACTGGTCATACCATAACTGTAATAACTCAGCCCCTCTTGTATGCTCCTaGCAGTTTTCTTTGAGATCG +
Preference number: 4 (lower is better)
Translates to: RKDTNPSHWSYHNCNNSAPLVCS*QFSLRS
Trigger: CGATCTCAAAGAAAACTGTCAGGAGCATACAAGAGG...GGCTGAGTTATTACAGTTATGGTATGACCAGTGAGAGGGATTTGTGTCCTTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271583.7
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR TCA 90 bp GAGAAATTGACCTTCTGTTGGACACTGGTGGCTTCATATCTTGGGTATCTTAGACTTCTTCAGAGAAATTaGCCTTCTGTTGGACACTGG +
Preference number: 4 (lower is better)
Translates to: EKLTFCWTLVASYLGYLRLLQRN*PSVGHW
Trigger: CCAGTGTCCAACAGAAGGTCAATTTCTCTGAAGAAG...TCTAAGATACCCAAGATATGAAGCCACCAGTGTCCAACAGAAGGTCAATTTCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529091.5
CDS-3UTR TCA 90 bp AGAAAGGACACAAATCCCTCTCACTGGTCATACCATAACTGTAATAACTCAGCCGGTCTACCTCTAGTTTaGCAGTATCACTGTCTTGAG +
Preference number: 4 (lower is better)
Translates to: RKDTNPSHWSYHNCNNSAGLPLV*QYHCLE
Trigger: CTCAAGACAGTGATACTGTCAAACTAGAGGTAGACC...GGCTGAGTTATTACAGTTATGGTATGACCAGTGAGAGGGATTTGTGTCCTTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271583.7
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR TCA 90 bp GTAAATCTTTATATTTGCTATGGCGTTGCACTAGAGGACTTGGACTGCAACAAGCTAAGGCTACATCTTTaGAGGCCGCGTTTTCATGGT +
Preference number: 4 (lower is better)
Translates to: VNLYICYGVALEDLDCNKLRLHL*RPRFHG
Trigger: ACCATGAAAACGCGGCCTTCAAAGATGTAGCCTTAG...CTTGTTGCAGTCCAAGTCCTCTAGTGCAACGCCATAGCAAATATAAAGATTTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR TCA 90 bp CAAGTGGATGCGCGGAAAATGAAATCTTCTTCAATAGCCCAGGACAGCTGGTTATCAGAACTTGGGACATaGTTTTTCTTCTCTCTCACT +
Preference number: 4 (lower is better)
Translates to: QVDARKMKSSSIAQDSWLSELGT*FFFSLT
Trigger: AGTGAGAGAGAAGAAAAATCATGTCCCAAGTTCTGA...TAACCAGCTGTCCTGGGCTATTGAAGAAGATTTCATTTTCCGCGCATCCACTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR TCA 90 bp CTAACACTATACACTCACTTTGTCAGCATCCCTTTTGTCCATTTAGACGAAAACATTTGCCAGACTACTTaGGGTTACAGTGACGGCCAC +
Preference number: 4 (lower is better)
Translates to: LTLYTHFVSIPFVHLDENICQTT*GYSDGH
Trigger: GTGGCCGTCACTGTAACCTCAAGTAGTCTGGCAAAT...GTTTTCGTCTAAATGGACAAAAGGGATGCTGACAAAGTGAGTGTATAGTGTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529091.5
CDS-3UTR GCA 90 bp AGAAAGGACACAAATCCCTCTCACTGGTCATACCATAACTGTAATAACTCAGCCAAGATCTTCACTCACTaGTGGAGCCTCTTGTATGCT +
Preference number: 4 (lower is better)
Translates to: RKDTNPSHWSYHNCNNSAKIFTH*WSLLYA
Trigger: AGCATACAAGAGGCTCCAGCAGTGAGTGAAGATCTT...GGCTGAGTTATTACAGTTATGGTATGACCAGTGAGAGGGATTTGTGTCCTTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271583.7
ENST00000528443.6
CDS-3UTR GCA 90 bp TCCTATAGGCAGAAGCTAAGGAACTCACACCTAAATGGTATAAAAGGGAACATAACTCAGACACCTAAGTaGTTCTTCAGCATCTCGGGC +
Preference number: 4 (lower is better)
Translates to: SYRQKLRNSHLNGIKGNITQTPK*FFSISG
Trigger: GCCCGAGATGCTGAAGAAGCACTTAGGTGTCTGAGT...TATGTTCCCTTTTATACCATTTAGGTGTGAGTTCCTTAGCTTCTGCCTATAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271583.7
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR GCA 90 bp AAGCTAAGGAACTCACACCTAAATGGTATAAAAGGGAACATAATGGGAAAATCCCTAGAGGACTTGGACTaGAACAAGTGGATGCGCGGA +
Preference number: 4 (lower is better)
Translates to: KLRNSHLNGIKGNIMGKSLEDLD*NKWMRG
Trigger: TCCGCGCATCCACTTGTTGCAGTCCAAGTCCTCTAG...GGATTTTCCCATTATGTTCCCTTTTATACCATTTAGGTGTGAGTTCCTTAGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR GCA 90 bp AGAAAGGACACAAATCCCTCTCACTGGTCATACCATAACTGTAATAACTCAGCCTATTTGCTATGGCGTTaGACTAGAGGACTTGGACTG +
Preference number: 4 (lower is better)
Translates to: RKDTNPSHWSYHNCNNSAYLLWR*TRGLGL
Trigger: CAGTCCAAGTCCTCTAGTGCAACGCCATAGCAAATA...GGCTGAGTTATTACAGTTATGGTATGACCAGTGAGAGGGATTTGTGTCCTTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR CCA 90 bp CATTTTTGTTGCCCAGACTGGAGGGCAATAAGCATGGTCTCGGCTTACTGCAACTTCTTTGAGATCGTTTaGCTTAAATCAGTTTGGGAA +
Preference number: 4 (lower is better)
Translates to: HFCCPDWRAISMVSAYCNFFEIV*LKSVWE
Trigger: TTCCCAAACTGATTTAAGCCAAACGATCTCAAAGAA...GTTGCAGTAAGCCGAGACCATGCTTATTGCCCTCCAGTCTGGGCAACAAAAATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000271583.7
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR CCA 90 bp GTAAATCTTTATATTTGCTATGGCGTTGCACTAGAGGACTTGGACTGCAACAAGCCTTCTGTTGGACACTaGTGGCTTCATATCTTGGGT +
Preference number: 4 (lower is better)
Translates to: VNLYICYGVALEDLDCNKPSVGH*WLHILG
Trigger: ACCCAAGATATGAAGCCACCAGTGTCCAACAGAAGG...CTTGTTGCAGTCCAAGTCCTCTAGTGCAACGCCATAGCAAATATAAAGATTTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR CCA 90 bp CAAGTGGATGCGCGGAAAATGAAATCTTCTTCAATAGCCCAGGACAGCTGGTTAAAATTGACCTTCTGTTaGACACTGGTGGCTTCATAT +
Preference number: 4 (lower is better)
Translates to: QVDARKMKSSSIAQDSWLKLTFC*TLVASY
Trigger: ATATGAAGCCACCAGTGTCCAACAGAAGGTCAATTT...TAACCAGCTGTCCTGGGCTATTGAAGAAGATTTCATTTTCCGCGCATCCACTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR CCA 90 bp CATAGTAAATCTTTATATTTGCTATGGCGTTGCACTAGAGGACTTGGACTGCAATATTCTTGCAGTTTGTaGGGCCCATTCCTGGGGAGT +
Preference number: 4 (lower is better)
Translates to: HSKSLYLLWRCTRGLGLQYSCSL*GPFLGS
Trigger: ACTCCCCAGGAATGGGCCCCACAAACTGCAAGAATA...TTGCAGTCCAAGTCCTCTAGTGCAACGCCATAGCAAATATAAAGATTTACTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR CCA 90 bp AAGCTAAGGAACTCACACCTAAATGGTATAAAAGGGAACATAATGGGAAAATCCCAGTCACTTGTCGGCTaGAGGTTGATGGTGACTGGT +
Preference number: 4 (lower is better)
Translates to: KLRNSHLNGIKGNIMGKSQSLVG*RLMVTG
Trigger: ACCAGTCACCATCAACCTCCAGCCGACAAGTGACTG...GGATTTTCCCATTATGTTCCCTTTTATACCATTTAGGTGTGAGTTCCTTAGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271583.7
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR CCA 90 bp AAGGAACTCACACCTAAATGGTATAAAAGGGAACATAATGGGAAAATCCCTGGTTCCCATCAATCCGGATaGCACGGACACTACGAAAAG +
Preference number: 4 (lower is better)
Translates to: KELTPKWYKREHNGKIPGSHQSG*HGHYEK
Trigger: CTTTTCGTAGTGTCCGTGCCATCCGGATTGATGGGA...ACCAGGGATTTTCCCATTATGTTCCCTTTTATACCATTTAGGTGTGAGTTCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000271583.7
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR CCA 90 bp CATAGTAAATCTTTATATTTGCTATGGCGTTGCACTAGAGGACTTGGACTGCAATCCCATCAATCCGGATaGCACGGACACTACGAAAAG +
Preference number: 4 (lower is better)
Translates to: HSKSLYLLWRCTRGLGLQSHQSG*HGHYEK
Trigger: CTTTTCGTAGTGTCCGTGCCATCCGGATTGATGGGA...TTGCAGTCCAAGTCCTCTAGTGCAACGCCATAGCAAATATAAAGATTTACTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR CCA 90 bp TTCTCTAAGGAACTGCATATAATCTGCACTCCTAAGATACCTTTAACAGAGCTCGTGATCCACCTGCCTTaGCCTGACCTACTCTTAAGA +
Preference number: 4 (lower is better)
Translates to: FSKELHIICTPKIPLTELVIHLP*PDLLLR
Trigger: TCTTAAGAGTAGGTCAGGCCAAGGCAGGTGGATCAC...GAGCTCTGTTAAAGGTATCTTAGGAGTGCAGATTATATGCAGTTCCTTAGAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271583.7
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR CCA 90 bp CATTTTTGTTGCCCAGACTGGAGGGCAATAAGCATGGTCTCGGCTTACTGCAACATAAATTCACTATCTTaGCTTGAGGCACTCCATAAA +
Preference number: 4 (lower is better)
Translates to: HFCCPDWRAISMVSAYCNINSLS*LEALHK
Trigger: TTTATGGAGTGCCTCAAGCCAAGATAGTGAATTTAT...GTTGCAGTAAGCCGAGACCATGCTTATTGCCCTCCAGTCTGGGCAACAAAAATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR TCA 90 bp AAGGAACTCACACCTAAATGGTATAAAAGGGAACATAATGGGAAAATCCCTGGTGGGGTCGACGTAACCTaGTTACAAGATCTTCACTCA +
Preference number: 4 (lower is better)
Translates to: KELTPKWYKREHNGKIPGGVDVT*LQDLHS
Trigger: TGAGTGAAGATCTTGTAATCAGGTTACGTCGACCCC...ACCAGGGATTTTCCCATTATGTTCCCTTTTATACCATTTAGGTGTGAGTTCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000271583.7
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR TCA 90 bp TCCTATAGGCAGAAGCTAAGGAACTCACACCTAAATGGTATAAAAGGGAACATAGGGGTCGACGTAACCTaGTTACAAGATCTTCACTCA +
Preference number: 4 (lower is better)
Translates to: SYRQKLRNSHLNGIKGNIGVDVT*LQDLHS
Trigger: TGAGTGAAGATCTTGTAATCAGGTTACGTCGACCCC...TATGTTCCCTTTTATACCATTTAGGTGTGAGTTCCTTAGCTTCTGCCTATAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271583.7
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR TCA 90 bp TTCTCTAAGGAACTGCATATAATCTGCACTCCTAAGATACCTTTAACAGAGCTCACCACCGGTTCCTCTTaGCAAAAGATGCATTTTGGG +
Preference number: 4 (lower is better)
Translates to: FSKELHIICTPKIPLTELTTGSS*QKMHFG
Trigger: CCCAAAATGCATCTTTTGTCAAGAGGAACCGGTGGT...GAGCTCTGTTAAAGGTATCTTAGGAGTGCAGATTATATGCAGTTCCTTAGAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271583.7
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR TCA 90 bp TTCTCTAAGGAACTGCATATAATCTGCACTCCTAAGATACCTTTAACAGAGCTCCTAAGGCTACATCTTTaGAGGCCGCGTTTTCATGGT +
Preference number: 4 (lower is better)
Translates to: FSKELHIICTPKIPLTELLRLHL*RPRFHG
Trigger: ACCATGAAAACGCGGCCTTCAAAGATGTAGCCTTAG...GAGCTCTGTTAAAGGTATCTTAGGAGTGCAGATTATATGCAGTTCCTTAGAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271583.7
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR TCA 90 bp AAGGAACTCACACCTAAATGGTATAAAAGGGAACATAATGGGAAAATCCCTGGTCTAAGGCTACATCTTTaGAGGCCGCGTTTTCATGGT +
Preference number: 4 (lower is better)
Translates to: KELTPKWYKREHNGKIPGLRLHL*RPRFHG
Trigger: ACCATGAAAACGCGGCCTTCAAAGATGTAGCCTTAG...ACCAGGGATTTTCCCATTATGTTCCCTTTTATACCATTTAGGTGTGAGTTCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000271583.7
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR TCA 90 bp AACTCACACCTAAATGGTATAAAAGGGAACATAATGGGAAAATCCCTGGTTACAACAGGCAGAACTAAGTaGGAAATACGGCTCCAGAGG +
Preference number: 4 (lower is better)
Translates to: NSHLNGIKGNIMGKSLVTTGRTK*EIRLQR
Trigger: CCTCTGGAGCCGTATTTCTCACTTAGTTCTGCCTGT...TGTAACCAGGGATTTTCCCATTATGTTCCCTTTTATACCATTTAGGTGTGAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271583.7
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR TCA 90 bp AAGCTAAGGAACTCACACCTAAATGGTATAAAAGGGAACATAATGGGAAAATCCACAGGCAGAACTAAGTaGGAAATACGGCTCCAGAGG +
Preference number: 4 (lower is better)
Translates to: KLRNSHLNGIKGNIMGKSTGRTK*EIRLQR
Trigger: CCTCTGGAGCCGTATTTCTCACTTAGTTCTGCCTGT...GGATTTTCCCATTATGTTCCCTTTTATACCATTTAGGTGTGAGTTCCTTAGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271583.7
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR TCA 90 bp CAAGTGGATGCGCGGAAAATGAAATCTTCTTCAATAGCCCAGGACAGCTGGTTAAGGGGTATACATTTATaGATACTGGTAGTACTAGAG +
Preference number: 4 (lower is better)
Translates to: QVDARKMKSSSIAQDSWLRGIHL*ILVVLE
Trigger: CTCTAGTACTACCAGTATTCATAAATGTATACCCCT...TAACCAGCTGTCCTGGGCTATTGAAGAAGATTTCATTTTCCGCGCATCCACTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000435319.8
ENST00000606911.7
CDS-3UTR GCA 90 bp AACTCACACCTAAATGGTATAAAAGGGAACATAATGGGAAAATCCCTGGTTACACCTGGTCCTTATTCTTaGAGTTTGTGGGGCCCATTC +
Preference number: 4 (lower is better)
Translates to: NSHLNGIKGNIMGKSLVTPGPYS*SLWGPF
Trigger: GAATGGGCCCCACAAACTGCAAGAATAAGGACCAGG...TGTAACCAGGGATTTTCCCATTATGTTCCCTTTTATACCATTTAGGTGTGAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000271583.7
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR GCA 90 bp AAGCTAAGGAACTCACACCTAAATGGTATAAAAGGGAACATAATGGGAAAATCCACTCAGACACCTAAGTaGTTCTTCAGCATCTCGGGC +
Preference number: 4 (lower is better)
Translates to: KLRNSHLNGIKGNIMGKSTQTPK*FFSISG
Trigger: GCCCGAGATGCTGAAGAAGCACTTAGGTGTCTGAGT...GGATTTTCCCATTATGTTCCCTTTTATACCATTTAGGTGTGAGTTCCTTAGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271583.7
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR GCA 90 bp CAAGTGGATGCGCGGAAAATGAAATCTTCTTCAATAGCCCAGGACAGCTGGTTAAGAATGCTGTCATTTTaGATCCTGGTCCTTATTCTT +
Preference number: 4 (lower is better)
Translates to: QVDARKMKSSSIAQDSWLRMLSF*ILVLIL
Trigger: AAGAATAAGGACCAGGATGCAAAATGACAGCATTCT...TAACCAGCTGTCCTGGGCTATTGAAGAAGATTTCATTTTCCGCGCATCCACTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR CCA 90 bp AAGGAACTCACACCTAAATGGTATAAAAGGGAACATAATGGGAAAATCCCTGGTATCTTCACTCACTGCTaGAGCCTCTTGTATGCTCCT +
Preference number: 4 (lower is better)
Translates to: KELTPKWYKREHNGKIPGIFTHC*SLLYAP
Trigger: AGGAGCATACAAGAGGCTCCAGCAGTGAGTGAAGAT...ACCAGGGATTTTCCCATTATGTTCCCTTTTATACCATTTAGGTGTGAGTTCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271583.7
ENST00000528443.6
CDS-3UTR CCA 90 bp GTAAATCTTTATATTTGCTATGGCGTTGCACTAGAGGACTTGGACTGCAACAAGTCTGTTGGACACTGGTaGCTTCATATCTTGGGTATC +
Preference number: 4 (lower is better)
Translates to: VNLYICYGVALEDLDCNKSVGHW*LHILGI
Trigger: GATACCCAAGATATGAAGCCACCAGTGTCCAACAGA...CTTGTTGCAGTCCAAGTCCTCTAGTGCAACGCCATAGCAAATATAAAGATTTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR CCA 90 bp TCCTATAGGCAGAAGCTAAGGAACTCACACCTAAATGGTATAAAAGGGAACATACCTTCTGTTGGACACTaGTGGCTTCATATCTTGGGT +
Preference number: 4 (lower is better)
Translates to: SYRQKLRNSHLNGIKGNIPSVGH*WLHILG
Trigger: ACCCAAGATATGAAGCCACCAGTGTCCAACAGAAGG...TATGTTCCCTTTTATACCATTTAGGTGTGAGTTCCTTAGCTTCTGCCTATAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271583.7
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR CCA 90 bp AAATTGACCTTCTGTTGGACACTGGTGGCTTCATATCTTGGGTATCTTAGAGGGAAATTGACCTTCTGTTaGACACTGGTGGCTTCATAT +
Preference number: 4 (lower is better)
Translates to: KLTFCWTLVASYLGYLRGKLTFC*TLVASY
Trigger: ATATGAAGCCACCAGTGTCCAACAGAAGGTCAATTT...CCCTCTAAGATACCCAAGATATGAAGCCACCAGTGTCCAACAGAAGGTCAATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529091.5
CDS-3UTR CCA 90 bp AACTCACACCTAAATGGTATAAAAGGGAACATAATGGGAAAATCCCTGGTTACATATTCTTGCAGTTTGTaGGGCCCATTCCTGGGGAGT +
Preference number: 4 (lower is better)
Translates to: NSHLNGIKGNIMGKSLVTYSCSL*GPFLGS
Trigger: ACTCCCCAGGAATGGGCCCCACAAACTGCAAGAATA...TGTAACCAGGGATTTTCCCATTATGTTCCCTTTTATACCATTTAGGTGTGAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000271583.7
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR CCA 90 bp GACGTTAAACCACTCTACTACCACTTGTGGAACTCTCAAAGGGTAAATGACAAAGAGGTTGATGGTGACTaGTTTCCAAGCTCTGATTTC +
Preference number: 4 (lower is better)
Translates to: DVKPLYYHLWNSQRVNDKEVDGD*FPSSDF
Trigger: GAAATCAGAGCTTGGAAACCAGTCACCATCAACCTC...TTTGTCATTTACCCTTTGAGAGTTCCACAAGTGGTAGTAGAGTGGTTTAACGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435319.8
ENST00000606911.7
CDS-3UTR CCA 90 bp GACGTTAAACCACTCTACTACCACTTGTGGAACTCTCAAAGGGTAAATGACAAAACTCTTGAACAGCAGTaGTTTCTACCTCAGGAGTAC +
Preference number: 4 (lower is better)
Translates to: DVKPLYYHLWNSQRVNDKTLEQQ*FLPQEY
Trigger: GTACTCCTGAGGTAGAAACCACTGCTGTTCAAGAGT...TTTGTCATTTACCCTTTGAGAGTTCCACAAGTGGTAGTAGAGTGGTTTAACGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435319.8
ENST00000606911.7
CDS-3UTR CCA 90 bp AGAAAGGACACAAATCCCTCTCACTGGTCATACCATAACTGTAATAACTCAGCCCCATTGCTCAGTTCTTaGTCTACCTCTAGTTTGACA +
Preference number: 4 (lower is better)
Translates to: RKDTNPSHWSYHNCNNSAPLLSS*STSSLT
Trigger: TGTCAAACTAGAGGTAGACCAAGAACTGAGCAATGG...GGCTGAGTTATTACAGTTATGGTATGACCAGTGAGAGGGATTTGTGTCCTTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271583.7
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR CCA 90 bp AGAAAGGACACAAATCCCTCTCACTGGTCATACCATAACTGTAATAACTCAGCCGCCATTCAGTTTGTCTaGGTCCATATGATTGTAGGA +
Preference number: 4 (lower is better)
Translates to: RKDTNPSHWSYHNCNNSAAIQFV*VHMIVG
Trigger: TCCTACAATCATATGGACCCAGACAAACTGAATGGC...GGCTGAGTTATTACAGTTATGGTATGACCAGTGAGAGGGATTTGTGTCCTTTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271583.7
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR CCA 90 bp AACTCACACCTAAATGGTATAAAAGGGAACATAATGGGAAAATCCCTGGTTACAGTGATCCACCTGCCTTaGCCTGACCTACTCTTAAGA +
Preference number: 4 (lower is better)
Translates to: NSHLNGIKGNIMGKSLVTVIHLP*PDLLLR
Trigger: TCTTAAGAGTAGGTCAGGCCAAGGCAGGTGGATCAC...TGTAACCAGGGATTTTCCCATTATGTTCCCTTTTATACCATTTAGGTGTGAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271583.7
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR CCA 90 bp TTCTCTAAGGAACTGCATATAATCTGCACTCCTAAGATACCTTTAACAGAGCTCTTTTGTTGCCCAGACTaGAGGGCAATAAGCATGGTC +
Preference number: 4 (lower is better)
Translates to: FSKELHIICTPKIPLTELFCCPD*RAISMV
Trigger: GACCATGCTTATTGCCCTCCAGTCTGGGCAACAAAA...GAGCTCTGTTAAAGGTATCTTAGGAGTGCAGATTATATGCAGTTCCTTAGAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271583.7
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR CCA 90 bp GACGTTAAACCACTCTACTACCACTTGTGGAACTCTCAAAGGGTAAATGACAAAAAGATCTTCACTCACTaGAGCCTCTTGTATGCTCCT +
Preference number: 4 (lower is better)
Translates to: DVKPLYYHLWNSQRVNDKKIFTH*SLLYAP
Trigger: AGGAGCATACAAGAGGCTCCAGTGAGTGAAGATCTT...TTTGTCATTTACCCTTTGAGAGTTCCACAAGTGGTAGTAGAGTGGTTTAACGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000435319.8
ENST00000606911.7
CDS-3UTR TCA 90 bp TCCTATAGGCAGAAGCTAAGGAACTCACACCTAAATGGTATAAAAGGGAACATACTTCTTCAGAGAAATTaGCCTTCTGTTGGACACTGG +
Preference number: 4 (lower is better)
Translates to: SYRQKLRNSHLNGIKGNILLQRN*PSVGHW
Trigger: CCAGTGTCCAACAGAAGGTCAATTTCTCTGAAGAAG...TATGTTCCCTTTTATACCATTTAGGTGTGAGTTCCTTAGCTTCTGCCTATAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271583.7
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR TCA 90 bp AGAAAGGACACAAATCCCTCTCACTGGTCATACCATAACTGTAATAACTCAGCCGCTTATCATGAGCTGTaGAGTTTTGACTTTGTGATG +
Preference number: 4 (lower is better)
Translates to: RKDTNPSHWSYHNCNNSAAYHEL*SFDFVM
Trigger: CATCACAAAGTCAAAACTTCACAGCTCATGATAAGC...GGCTGAGTTATTACAGTTATGGTATGACCAGTGAGAGGGATTTGTGTCCTTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271583.7
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR TCA 90 bp AAGCTAAGGAACTCACACCTAAATGGTATAAAAGGGAACATAATGGGAAAATCCACCACCGGTTCCTCTTaGCAAAAGATGCATTTTGGG +
Preference number: 4 (lower is better)
Translates to: KLRNSHLNGIKGNIMGKSTTGSS*QKMHFG
Trigger: CCCAAAATGCATCTTTTGTCAAGAGGAACCGGTGGT...GGATTTTCCCATTATGTTCCCTTTTATACCATTTAGGTGTGAGTTCCTTAGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000271583.7
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR TCA 90 bp GACGTTAAACCACTCTACTACCACTTGTGGAACTCTCAAAGGGTAAATGACAAAACAGTATCACTGTCTTaGGTAGCTTTATCTGTCCCA +
Preference number: 4 (lower is better)
Translates to: DVKPLYYHLWNSQRVNDKTVSLS*VALSVP
Trigger: TGGGACAGATAAAGCTACTCAAGACAGTGATACTGT...TTTGTCATTTACCCTTTGAGAGTTCCACAAGTGGTAGTAGAGTGGTTTAACGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435319.8
ENST00000606911.7
CDS-3UTR TCA 90 bp AGAAAGGACACAAATCCCTCTCACTGGTCATACCATAACTGTAATAACTCAGCCATTTTGCAATATACATaGAGAATCCTTGGGACAGCC +
Preference number: 4 (lower is better)
Translates to: RKDTNPSHWSYHNCNNSAILQYT*RILGTA
Trigger: GGCTGTCCCAAGGATTCTTCATGTATATTGCAAAAT...GGCTGAGTTATTACAGTTATGGTATGACCAGTGAGAGGGATTTGTGTCCTTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271583.7
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR GCA 90 bp CAAGTGGATGCGCGGAAAATGAAATCTTCTTCAATAGCCCAGGACAGCTGGTTAGAACTGCATATAATCTaGACTCCTAAGATACCTTTA +
Preference number: 4 (lower is better)
Translates to: QVDARKMKSSSIAQDSWLELHII*TPKIPL
Trigger: TAAAGGTATCTTAGGAGTGCAGATTATATGCAGTTC...TAACCAGCTGTCCTGGGCTATTGAAGAAGATTTCATTTTCCGCGCATCCACTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR GCA 90 bp AAGGAACTCACACCTAAATGGTATAAAAGGGAACATAATGGGAAAATCCCTGGTTATTTGCTATGGCGTTaGACTAGAGGACTTGGACTG +
Preference number: 4 (lower is better)
Translates to: KELTPKWYKREHNGKIPGYLLWR*TRGLGL
Trigger: CAGTCCAAGTCCTCTAGTGCAACGCCATAGCAAATA...ACCAGGGATTTTCCCATTATGTTCCCTTTTATACCATTTAGGTGTGAGTTCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR GCA 90 bp CAAGTGGATGCGCGGAAAATGAAATCTTCTTCAATAGCCCAGGACAGCTGGTTAGTAAATCTTTATATTTaGTATGGCGTTGCACTAGAG +
Preference number: 4 (lower is better)
Translates to: QVDARKMKSSSIAQDSWLVNLYI*YGVALE
Trigger: CTCTAGTGCAACGCCATAGCAAATATAAAGATTTAC...TAACCAGCTGTCCTGGGCTATTGAAGAAGATTTCATTTTCCGCGCATCCACTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR CCA 90 bp CAAGTGGATGCGCGGAAAATGAAATCTTCTTCAATAGCCCAGGACAGCTGGTTATTCTTTGAGATCGTTTaGCTTAAATCAGTTTGGGAA +
Preference number: 4 (lower is better)
Translates to: QVDARKMKSSSIAQDSWLFFEIV*LKSVWE
Trigger: TTCCCAAACTGATTTAAGCCAAACGATCTCAAAGAA...TAACCAGCTGTCCTGGGCTATTGAAGAAGATTTCATTTTCCGCGCATCCACTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR CCA 90 bp AAGGAACTCACACCTAAATGGTATAAAAGGGAACATAATGGGAAAATCCCTGGTTCTGTTGGACACTGGTaGCTTCATATCTTGGGTATC +
Preference number: 4 (lower is better)
Translates to: KELTPKWYKREHNGKIPGSVGHW*LHILGI
Trigger: GATACCCAAGATATGAAGCCACCAGTGTCCAACAGA...ACCAGGGATTTTCCCATTATGTTCCCTTTTATACCATTTAGGTGTGAGTTCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271583.7
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR CCA 90 bp CATAGTAAATCTTTATATTTGCTATGGCGTTGCACTAGAGGACTTGGACTGCAAGAGGTTGATGGTGACTaGTTTCCAAGCTCTGATTTC +
Preference number: 4 (lower is better)
Translates to: HSKSLYLLWRCTRGLGLQEVDGD*FPSSDF
Trigger: GAAATCAGAGCTTGGAAACCAGTCACCATCAACCTC...TTGCAGTCCAAGTCCTCTAGTGCAACGCCATAGCAAATATAAAGATTTACTATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR CCA 90 bp GACGTTAAACCACTCTACTACCACTTGTGGAACTCTCAAAGGGTAAATGACAAAGCCATTCAGTTTGTCTaGGTCCATATGATTGTAGGA +
Preference number: 4 (lower is better)
Translates to: DVKPLYYHLWNSQRVNDKAIQFV*VHMIVG
Trigger: TCCTACAATCATATGGACCCAGACAAACTGAATGGC...TTTGTCATTTACCCTTTGAGAGTTCCACAAGTGGTAGTAGAGTGGTTTAACGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435319.8
ENST00000606911.7
CDS-3UTR CCA 90 bp GTAAATCTTTATATTTGCTATGGCGTTGCACTAGAGGACTTGGACTGCAACAAGATAGCCCAGGACAGCTaGTTAACAAATGGTTTGTCA +
Preference number: 4 (lower is better)
Translates to: VNLYICYGVALEDLDCNKIAQDS*LTNGLS
Trigger: TGACAAACCATTTGTTAACCAGCTGTCCTGGGCTAT...CTTGTTGCAGTCCAAGTCCTCTAGTGCAACGCCATAGCAAATATAAAGATTTAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR TCA 90 bp AAGCTAAGGAACTCACACCTAAATGGTATAAAAGGGAACATAATGGGAAAATCCCCTCTTGTATGCTCCTaGCAGTTTTCTTTGAGATCG +
Preference number: 4 (lower is better)
Translates to: KLRNSHLNGIKGNIMGKSPLVCS*QFSLRS
Trigger: CGATCTCAAAGAAAACTGTCAGGAGCATACAAGAGG...GGATTTTCCCATTATGTTCCCTTTTATACCATTTAGGTGTGAGTTCCTTAGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000271583.7
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR TCA 90 bp AACTCACACCTAAATGGTATAAAAGGGAACATAATGGGAAAATCCCTGGTTACACCTCTTGTATGCTCCTaGCAGTTTTCTTTGAGATCG +
Preference number: 4 (lower is better)
Translates to: NSHLNGIKGNIMGKSLVTPLVCS*QFSLRS
Trigger: CGATCTCAAAGAAAACTGTCAGGAGCATACAAGAGG...TGTAACCAGGGATTTTCCCATTATGTTCCCTTTTATACCATTTAGGTGTGAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000271583.7
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR TCA 90 bp AACTCACACCTAAATGGTATAAAAGGGAACATAATGGGAAAATCCCTGGTTACAGGTCTACCTCTAGTTTaGCAGTATCACTGTCTTGAG +
Preference number: 4 (lower is better)
Translates to: NSHLNGIKGNIMGKSLVTGLPLV*QYHCLE
Trigger: CTCAAGACAGTGATACTGTCAAACTAGAGGTAGACC...TGTAACCAGGGATTTTCCCATTATGTTCCCTTTTATACCATTTAGGTGTGAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271583.7
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR TCA 90 bp AGAAAGGACACAAATCCCTCTCACTGGTCATACCATAACTGTAATAACTCAGCCGAAAACCATAGCATTTaGCAGATGAGAAAGCTCAAT +
Preference number: 4 (lower is better)
Translates to: RKDTNPSHWSYHNCNNSAENHSI*QMRKLN
Trigger: ATTGAGCTTTCTCATCTGTCAAATGCTATGGTTTTC...GGCTGAGTTATTACAGTTATGGTATGACCAGTGAGAGGGATTTGTGTCCTTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR TCA 90 bp AGAAAGGACACAAATCCCTCTCACTGGTCATACCATAACTGTAATAACTCAGCCAGGGGTATACATTTATaGATACTGGTAGTACTAGAG +
Preference number: 4 (lower is better)
Translates to: RKDTNPSHWSYHNCNNSARGIHL*ILVVLE
Trigger: CTCTAGTACTACCAGTATTCATAAATGTATACCCCT...GGCTGAGTTATTACAGTTATGGTATGACCAGTGAGAGGGATTTGTGTCCTTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435319.8
ENST00000606911.7
CDS-3UTR GCA 90 bp CATAGTAAATCTTTATATTTGCTATGGCGTTGCACTAGAGGACTTGGACTGCAAATCAGTTTGGGAAGATaGTTCATCCTCTTCAGAGGA +
Preference number: 4 (lower is better)
Translates to: HSKSLYLLWRCTRGLGLQISLGR*FILFRG
Trigger: TCCTCTGAAGAGGATGAAGCATCTTCCCAAACTGAT...TTGCAGTCCAAGTCCTCTAGTGCAACGCCATAGCAAATATAAAGATTTACTATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR GCA 90 bp TTCTCTAAGGAACTGCATATAATCTGCACTCCTAAGATACCTTTAACAGAGCTCCCTGGTGAAGATGTTTaGATCCTGGTCCTTATTCTT +
Preference number: 4 (lower is better)
Translates to: FSKELHIICTPKIPLTELPGEDV*ILVLIL
Trigger: AAGAATAAGGACCAGGATGCAAACATCTTCACCAGG...GAGCTCTGTTAAAGGTATCTTAGGAGTGCAGATTATATGCAGTTCCTTAGAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271583.7
CDS-3UTR GCA 90 bp TCCTATAGGCAGAAGCTAAGGAACTCACACCTAAATGGTATAAAAGGGAACATAGCTCTGATTTCAGAATaGTGTCATTTTGCATCCTGG +
Preference number: 4 (lower is better)
Translates to: SYRQKLRNSHLNGIKGNIALISE*CHFASW
Trigger: CCAGGATGCAAAATGACAGCATTCTGAAATCAGAGC...TATGTTCCCTTTTATACCATTTAGGTGTGAGTTCCTTAGCTTCTGCCTATAGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR GCA 90 bp TCCTATAGGCAGAAGCTAAGGAACTCACACCTAAATGGTATAAAAGGGAACATAACTGCAACAAGTGGATaGGCGGAAAATGAAATCTTC +
Preference number: 4 (lower is better)
Translates to: SYRQKLRNSHLNGIKGNITATSG*AENEIF
Trigger: GAAGATTTCATTTTCCGCGCATCCACTTGTTGCAGT...TATGTTCCCTTTTATACCATTTAGGTGTGAGTTCCTTAGCTTCTGCCTATAGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR CCA 90 bp AACAGTAGTGACACTGCTGTGAGAGCTGTCTTGATCATCTTCTTCAGTTTCTCCTTCTTTGAGATCGTTTaGCTTAAATCAGTTTGGGAA +
Preference number: 4 (lower is better)
Translates to: NSSDTAVRAVLIIFFSFSFFEIV*LKSVWE
Trigger: TTCCCAAACTGATTTAAGCCAAACGATCTCAAAGAA...GGAGAAACTGAAGAAGATGATCAAGACAGCTCTCACAGCAGTGTCACTACTGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529091.5
CDS-3UTR CCA 90 bp AAGCTAAGGAACTCACACCTAAATGGTATAAAAGGGAACATAATGGGAAAATCCGAGGTTGATGGTGACTaGTTTCCAAGCTCTGATTTC +
Preference number: 4 (lower is better)
Translates to: KLRNSHLNGIKGNIMGKSEVDGD*FPSSDF
Trigger: GAAATCAGAGCTTGGAAACCAGTCACCATCAACCTC...GGATTTTCCCATTATGTTCCCTTTTATACCATTTAGGTGTGAGTTCCTTAGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271583.7
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR CCA 90 bp AAGGAACTCACACCTAAATGGTATAAAAGGGAACATAATGGGAAAATCCCTGGTACCACAGCTGCATTCTaGCCATTCTTAAATCCATTG +
Preference number: 4 (lower is better)
Translates to: KELTPKWYKREHNGKIPGTTAAF*PFLNPL
Trigger: CAATGGATTTAAGAATGGCCAGAATGCAGCTGTGGT...ACCAGGGATTTTCCCATTATGTTCCCTTTTATACCATTTAGGTGTGAGTTCCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271583.7
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR CCA 90 bp AAGGAACTCACACCTAAATGGTATAAAAGGGAACATAATGGGAAAATCCCTGGTGCCATTCAGTTTGTCTaGGTCCATATGATTGTAGGA +
Preference number: 4 (lower is better)
Translates to: KELTPKWYKREHNGKIPGAIQFV*VHMIVG
Trigger: TCCTACAATCATATGGACCCAGACAAACTGAATGGC...ACCAGGGATTTTCCCATTATGTTCCCTTTTATACCATTTAGGTGTGAGTTCCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271583.7
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR CCA 90 bp GACGTTAAACCACTCTACTACCACTTGTGGAACTCTCAAAGGGTAAATGACAAACTCTACTACCACTTGTaGAACTCTCAAAGGGTAAAT +
Preference number: 4 (lower is better)
Translates to: DVKPLYYHLWNSQRVNDKLYYHL*NSQRVN
Trigger: ATTTACCCTTTGAGAGTTCCACAAGTGGTAGTAGAG...TTTGTCATTTACCCTTTGAGAGTTCCACAAGTGGTAGTAGAGTGGTTTAACGTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435319.8
ENST00000606911.7
CDS-3UTR TCA 90 bp TCCTATAGGCAGAAGCTAAGGAACTCACACCTAAATGGTATAAAAGGGAACATAGCTTATCATGAGCTGTaGAGTTTTGACTTTGTGATG +
Preference number: 4 (lower is better)
Translates to: SYRQKLRNSHLNGIKGNIAYHEL*SFDFVM
Trigger: CATCACAAAGTCAAAACTTCACAGCTCATGATAAGC...TATGTTCCCTTTTATACCATTTAGGTGTGAGTTCCTTAGCTTCTGCCTATAGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271583.7
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR TCA 90 bp TTCTCTAAGGAACTGCATATAATCTGCACTCCTAAGATACCTTTAACAGAGCTCGCTTATCATGAGCTGTaGAGTTTTGACTTTGTGATG +
Preference number: 4 (lower is better)
Translates to: FSKELHIICTPKIPLTELAYHEL*SFDFVM
Trigger: CATCACAAAGTCAAAACTTCACAGCTCATGATAAGC...GAGCTCTGTTAAAGGTATCTTAGGAGTGCAGATTATATGCAGTTCCTTAGAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271583.7
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR TCA 90 bp AACTCACACCTAAATGGTATAAAAGGGAACATAATGGGAAAATCCCTGGTTACAACAGTATCACTGTCTTaGGTAGCTTTATCTGTCCCA +
Preference number: 4 (lower is better)
Translates to: NSHLNGIKGNIMGKSLVTTVSLS*VALSVP
Trigger: TGGGACAGATAAAGCTACTCAAGACAGTGATACTGT...TGTAACCAGGGATTTTCCCATTATGTTCCCTTTTATACCATTTAGGTGTGAGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271583.7
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR TCA 90 bp AAGCTAAGGAACTCACACCTAAATGGTATAAAAGGGAACATAATGGGAAAATCCACAGTATCACTGTCTTaGGTAGCTTTATCTGTCCCA +
Preference number: 4 (lower is better)
Translates to: KLRNSHLNGIKGNIMGKSTVSLS*VALSVP
Trigger: TGGGACAGATAAAGCTACTCAAGACAGTGATACTGT...GGATTTTCCCATTATGTTCCCTTTTATACCATTTAGGTGTGAGTTCCTTAGCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271583.7
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR TCA 90 bp TTCTCTAAGGAACTGCATATAATCTGCACTCCTAAGATACCTTTAACAGAGCTCTCAGAACTTGGGACATaGTTTTTCTTCTCTCTCACT +
Preference number: 4 (lower is better)
Translates to: FSKELHIICTPKIPLTELSELGT*FFFSLT
Trigger: AGTGAGAGAGAAGAAAAATCATGTCCCAAGTTCTGA...GAGCTCTGTTAAAGGTATCTTAGGAGTGCAGATTATATGCAGTTCCTTAGAGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000271583.7
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR TCA 90 bp TCCTATAGGCAGAAGCTAAGGAACTCACACCTAAATGGTATAAAAGGGAACATAATTTTGCAATATACATaGAGAATCCTTGGGACAGCC +
Preference number: 4 (lower is better)
Translates to: SYRQKLRNSHLNGIKGNIILQYT*RILGTA
Trigger: GGCTGTCCCAAGGATTCTTCATGTATATTGCAAAAT...TATGTTCCCTTTTATACCATTTAGGTGTGAGTTCCTTAGCTTCTGCCTATAGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271583.7
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR TCA 90 bp TTCTCTAAGGAACTGCATATAATCTGCACTCCTAAGATACCTTTAACAGAGCTCATTTTGCAATATACATaGAGAATCCTTGGGACAGCC +
Preference number: 4 (lower is better)
Translates to: FSKELHIICTPKIPLTELILQYT*RILGTA
Trigger: GGCTGTCCCAAGGATTCTTCATGTATATTGCAAAAT...GAGCTCTGTTAAAGGTATCTTAGGAGTGCAGATTATATGCAGTTCCTTAGAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271583.7
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR TCA 90 bp GTAAATCTTTATATTTGCTATGGCGTTGCACTAGAGGACTTGGACTGCAACAAGGAAAACCATAGCATTTaGCAGATGAGAAAGCTCAAT +
Preference number: 4 (lower is better)
Translates to: VNLYICYGVALEDLDCNKENHSI*QMRKLN
Trigger: ATTGAGCTTTCTCATCTGTCAAATGCTATGGTTTTC...CTTGTTGCAGTCCAAGTCCTCTAGTGCAACGCCATAGCAAATATAAAGATTTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR GCA 90 bp AAGCTAAGGAACTCACACCTAAATGGTATAAAAGGGAACATAATGGGAAAATCCATCAGTTTGGGAAGATaGTTCATCCTCTTCAGAGGA +
Preference number: 4 (lower is better)
Translates to: KLRNSHLNGIKGNIMGKSISLGR*FILFRG
Trigger: TCCTCTGAAGAGGATGAAGCATCTTCCCAAACTGAT...GGATTTTCCCATTATGTTCCCTTTTATACCATTTAGGTGTGAGTTCCTTAGCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271583.7
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR GCA 90 bp AGAAAGGACACAAATCCCTCTCACTGGTCATACCATAACTGTAATAACTCAGCCCATCATCTGAAAAACTaGCATATATTGAACTCTTGC +
Preference number: 4 (lower is better)
Translates to: RKDTNPSHWSYHNCNNSAHHLKN*HILNSC
Trigger: GCAAGAGTTCAATATATGGCAGTTTTTCAGATGATG...GGCTGAGTTATTACAGTTATGGTATGACCAGTGAGAGGGATTTGTGTCCTTTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000271583.7
CDS-3UTR GCA 90 bp TTCTCTAAGGAACTGCATATAATCTGCACTCCTAAGATACCTTTAACAGAGCTCCTTCTTATAAGCAGATaGCCCTTTTCAGGGCATTTT +
Preference number: 4 (lower is better)
Translates to: FSKELHIICTPKIPLTELLLISR*PFSGHF
Trigger: AAAATGCCCTGAAAAGGGGCATCTGCTTATAAGAAG...GAGCTCTGTTAAAGGTATCTTAGGAGTGCAGATTATATGCAGTTCCTTAGAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271583.7
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR GCA 90 bp AAGGAACTCACACCTAAATGGTATAAAAGGGAACATAATGGGAAAATCCCTGGTCTTCTTATAAGCAGATaGCCCTTTTCAGGGCATTTT +
Preference number: 4 (lower is better)
Translates to: KELTPKWYKREHNGKIPGLLISR*PFSGHF
Trigger: AAAATGCCCTGAAAAGGGGCATCTGCTTATAAGAAG...ACCAGGGATTTTCCCATTATGTTCCCTTTTATACCATTTAGGTGTGAGTTCCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000271583.7
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR GCA 90 bp TCCTATAGGCAGAAGCTAAGGAACTCACACCTAAATGGTATAAAAGGGAACATACTTCTTATAAGCAGATaGCCCTTTTCAGGGCATTTT +
Preference number: 4 (lower is better)
Translates to: SYRQKLRNSHLNGIKGNILLISR*PFSGHF
Trigger: AAAATGCCCTGAAAAGGGGCATCTGCTTATAAGAAG...TATGTTCCCTTTTATACCATTTAGGTGTGAGTTCCTTAGCTTCTGCCTATAGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271583.7
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR GCA 90 bp AACTCACACCTAAATGGTATAAAAGGGAACATAATGGGAAAATCCCTGGTTACAGAGTTTCATTTTTGTTaGCCAGACTGGAGGGCAATA +
Preference number: 4 (lower is better)
Translates to: NSHLNGIKGNIMGKSLVTEFHFC*PDWRAI
Trigger: TATTGCCCTCCAGTCTGGGCAACAAAAATGAAACTC...TGTAACCAGGGATTTTCCCATTATGTTCCCTTTTATACCATTTAGGTGTGAGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000271583.7
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR GCA 90 bp GTAAATCTTTATATTTGCTATGGCGTTGCACTAGAGGACTTGGACTGCAACAAGAGAATGCTGTCATTTTaGATCCTGGTCCTTATTCTT +
Preference number: 4 (lower is better)
Translates to: VNLYICYGVALEDLDCNKRMLSF*ILVLIL
Trigger: AAGAATAAGGACCAGGATGCAAAATGACAGCATTCT...CTTGTTGCAGTCCAAGTCCTCTAGTGCAACGCCATAGCAAATATAAAGATTTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR GCA 90 bp AAGCTAAGGAACTCACACCTAAATGGTATAAAAGGGAACATAATGGGAAAATCCGCTCTGATTTCAGAATaGTGTCATTTTGCATCCTGG +
Preference number: 4 (lower is better)
Translates to: KLRNSHLNGIKGNIMGKSALISE*CHFASW
Trigger: CCAGGATGCAAAATGACAGCATTCTGAAATCAGAGC...GGATTTTCCCATTATGTTCCCTTTTATACCATTTAGGTGTGAGTTCCTTAGCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR GCA 90 bp AAGCTAAGGAACTCACACCTAAATGGTATAAAAGGGAACATAATGGGAAAATCCACTGCAACAAGTGGATaGGCGGAAAATGAAATCTTC +
Preference number: 4 (lower is better)
Translates to: KLRNSHLNGIKGNIMGKSTATSG*AENEIF
Trigger: GAAGATTTCATTTTCCGCGCATCCACTTGTTGCAGT...GGATTTTCCCATTATGTTCCCTTTTATACCATTTAGGTGTGAGTTCCTTAGCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR GCA 90 bp AGAAAGGACACAAATCCCTCTCACTGGTCATACCATAACTGTAATAACTCAGCCGTAAATCTTTATATTTaGTATGGCGTTGCACTAGAG +
Preference number: 4 (lower is better)
Translates to: RKDTNPSHWSYHNCNNSAVNLYI*YGVALE
Trigger: CTCTAGTGCAACGCCATAGCAAATATAAAGATTTAC...GGCTGAGTTATTACAGTTATGGTATGACCAGTGAGAGGGATTTGTGTCCTTTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR CCA 90 bp TTCTCTAAGGAACTGCATATAATCTGCACTCCTAAGATACCTTTAACAGAGCTCAAATTGACCTTCTGTTaGACACTGGTGGCTTCATAT +
Preference number: 4 (lower is better)
Translates to: FSKELHIICTPKIPLTELKLTFC*TLVASY
Trigger: ATATGAAGCCACCAGTGTCCAACAGAAGGTCAATTT...GAGCTCTGTTAAAGGTATCTTAGGAGTGCAGATTATATGCAGTTCCTTAGAGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271583.7
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR CCA 90 bp TCCTATAGGCAGAAGCTAAGGAACTCACACCTAAATGGTATAAAAGGGAACATAAAATTGACCTTCTGTTaGACACTGGTGGCTTCATAT +
Preference number: 4 (lower is better)
Translates to: SYRQKLRNSHLNGIKGNIKLTFC*TLVASY
Trigger: ATATGAAGCCACCAGTGTCCAACAGAAGGTCAATTT...TATGTTCCCTTTTATACCATTTAGGTGTGAGTTCCTTAGCTTCTGCCTATAGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271583.7
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR CCA 90 bp GACGTTAAACCACTCTACTACCACTTGTGGAACTCTCAAAGGGTAAATGACAAAACAAATCCCTCTCACTaGTCATACCATAACTGTAAT +
Preference number: 4 (lower is better)
Translates to: DVKPLYYHLWNSQRVNDKTNPSH*SYHNCN
Trigger: ATTACAGTTATGGTATGACCAGTGAGAGGGATTTGT...TTTGTCATTTACCCTTTGAGAGTTCCACAAGTGGTAGTAGAGTGGTTTAACGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435319.8
ENST00000606911.7
CDS-3UTR CCA 90 bp GTAAATCTTTATATTTGCTATGGCGTTGCACTAGAGGACTTGGACTGCAACAAGACAAATCCCTCTCACTaGTCATACCATAACTGTAAT +
Preference number: 4 (lower is better)
Translates to: VNLYICYGVALEDLDCNKTNPSH*SYHNCN
Trigger: ATTACAGTTATGGTATGACCAGTGAGAGGGATTTGT...CTTGTTGCAGTCCAAGTCCTCTAGTGCAACGCCATAGCAAATATAAAGATTTAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR CCA 90 bp AAGCTAAGGAACTCACACCTAAATGGTATAAAAGGGAACATAATGGGAAAATCCATAGCCCAGGACAGCTaGTTAACAAATGGTTTGTCA +
Preference number: 4 (lower is better)
Translates to: KLRNSHLNGIKGNIMGKSIAQDS*LTNGLS
Trigger: TGACAAACCATTTGTTAACCAGCTGTCCTGGGCTAT...GGATTTTCCCATTATGTTCCCTTTTATACCATTTAGGTGTGAGTTCCTTAGCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR TCA 90 bp AAGCTAAGGAACTCACACCTAAATGGTATAAAAGGGAACATAATGGGAAAATCCTCAGAACTTGGGACATaGTTTTTCTTCTCTCTCACT +
Preference number: 4 (lower is better)
Translates to: KLRNSHLNGIKGNIMGKSSELGT*FFFSLT
Trigger: AGTGAGAGAGAAGAAAAATCATGTCCCAAGTTCTGA...GGATTTTCCCATTATGTTCCCTTTTATACCATTTAGGTGTGAGTTCCTTAGCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000271583.7
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR TCA 90 bp AAGCTAAGGAACTCACACCTAAATGGTATAAAAGGGAACATAATGGGAAAATCCATTTTGCAATATACATaGAGAATCCTTGGGACAGCC +
Preference number: 4 (lower is better)
Translates to: KLRNSHLNGIKGNIMGKSILQYT*RILGTA
Trigger: GGCTGTCCCAAGGATTCTTCATGTATATTGCAAAAT...GGATTTTCCCATTATGTTCCCTTTTATACCATTTAGGTGTGAGTTCCTTAGCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000271583.7
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR TCA 90 bp TCCTATAGGCAGAAGCTAAGGAACTCACACCTAAATGGTATAAAAGGGAACATAGAAAACCATAGCATTTaGCAGATGAGAAAGCTCAAT +
Preference number: 4 (lower is better)
Translates to: SYRQKLRNSHLNGIKGNIENHSI*QMRKLN
Trigger: ATTGAGCTTTCTCATCTGTCAAATGCTATGGTTTTC...TATGTTCCCTTTTATACCATTTAGGTGTGAGTTCCTTAGCTTCTGCCTATAGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR GCA 90 bp AAGGAACTCACACCTAAATGGTATAAAAGGGAACATAATGGGAAAATCCCTGGTCATATATTGAACTCTTaGCTGGTGAAGATGTTTGCA +
Preference number: 4 (lower is better)
Translates to: KELTPKWYKREHNGKIPGHILNS*LVKMFA
Trigger: TGCAAACATCTTCACCAGGCAAGAGTTCAATATATG...ACCAGGGATTTTCCCATTATGTTCCCTTTTATACCATTTAGGTGTGAGTTCCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271583.7
CDS-3UTR GCA 90 bp AAGGAACTCACACCTAAATGGTATAAAAGGGAACATAATGGGAAAATCCCTGGTGCTCTGATTTCAGAATaGTGTCATCATCTGAAAAAC +
Preference number: 4 (lower is better)
Translates to: KELTPKWYKREHNGKIPGALISE*CHHLKN
Trigger: GTTTTTCAGATGATGACAGCATTCTGAAATCAGAGC...ACCAGGGATTTTCCCATTATGTTCCCTTTTATACCATTTAGGTGTGAGTTCCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000271583.7
CDS-3UTR CCA 90 bp TTCTCTAAGGAACTGCATATAATCTGCACTCCTAAGATACCTTTAACAGAGCTCACAAATCCCTCTCACTaGTCATACCATAACTGTAAT +
Preference number: 4 (lower is better)
Translates to: FSKELHIICTPKIPLTELTNPSH*SYHNCN
Trigger: ATTACAGTTATGGTATGACCAGTGAGAGGGATTTGT...GAGCTCTGTTAAAGGTATCTTAGGAGTGCAGATTATATGCAGTTCCTTAGAGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271583.7
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR CCA 90 bp TTCTCTAAGGAACTGCATATAATCTGCACTCCTAAGATACCTTTAACAGAGCTCTCTTTATATTTGCTATaGCGTTGCACTAGAGGACTT +
Preference number: 4 (lower is better)
Translates to: FSKELHIICTPKIPLTELSLYLL*RCTRGL
Trigger: AAGTCCTCTAGTGCAACGCCATAGCAAATATAAAGA...GAGCTCTGTTAAAGGTATCTTAGGAGTGCAGATTATATGCAGTTCCTTAGAGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR CCA 90 bp AAGCTAAGGAACTCACACCTAAATGGTATAAAAGGGAACATAATGGGAAAATCCCTCTACTACCACTTGTaGAACTCTCAAAGGGTAAAT +
Preference number: 4 (lower is better)
Translates to: KLRNSHLNGIKGNIMGKSLYYHL*NSQRVN
Trigger: ATTTACCCTTTGAGAGTTCCACAAGTGGTAGTAGAG...GGATTTTCCCATTATGTTCCCTTTTATACCATTTAGGTGTGAGTTCCTTAGCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000435319.8
ENST00000606911.7
CDS-3UTR CCA 90 bp TCCTATAGGCAGAAGCTAAGGAACTCACACCTAAATGGTATAAAAGGGAACATATCTGAATTCTGTCTCTaGTTAGAAAGTGTGAACAAT +
Preference number: 4 (lower is better)
Translates to: SYRQKLRNSHLNGIKGNISEFCL*LESVNN
Trigger: ATTGTTCACACTTTCTAACCAGAGACAGAATTCAGA...TATGTTCCCTTTTATACCATTTAGGTGTGAGTTCCTTAGCTTCTGCCTATAGGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271583.7
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR CCA 90 bp AACTCACACCTAAATGGTATAAAAGGGAACATAATGGGAAAATCCCTGGTTACAACAAATCCCTCTCACTaGTCATACCATAACTGTAAT +
Preference number: 4 (lower is better)
Translates to: NSHLNGIKGNIMGKSLVTTNPSH*SYHNCN
Trigger: ATTACAGTTATGGTATGACCAGTGAGAGGGATTTGT...TGTAACCAGGGATTTTCCCATTATGTTCCCTTTTATACCATTTAGGTGTGAGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271583.7
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR CCA 90 bp AACTCACACCTAAATGGTATAAAAGGGAACATAATGGGAAAATCCCTGGTTACATGTCATTTTGCATCCTaGTCCTTATTCTTGCAGTTT +
Preference number: 4 (lower is better)
Translates to: NSHLNGIKGNIMGKSLVTCHFAS*SLFLQF
Trigger: AAACTGCAAGAATAAGGACCAGGATGCAAAATGACA...TGTAACCAGGGATTTTCCCATTATGTTCCCTTTTATACCATTTAGGTGTGAGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR CCA 90 bp AAGCTAAGGAACTCACACCTAAATGGTATAAAAGGGAACATAATGGGAAAATCCTGTCATTTTGCATCCTaGTCCTTATTCTTGCAGTTT +
Preference number: 4 (lower is better)
Translates to: KLRNSHLNGIKGNIMGKSCHFAS*SLFLQF
Trigger: AAACTGCAAGAATAAGGACCAGGATGCAAAATGACA...GGATTTTCCCATTATGTTCCCTTTTATACCATTTAGGTGTGAGTTCCTTAGCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR CCA 90 bp TCCTATAGGCAGAAGCTAAGGAACTCACACCTAAATGGTATAAAAGGGAACATAATAAATTCACTATCTTaGCTTGAGGCACTCCATAAA +
Preference number: 4 (lower is better)
Translates to: SYRQKLRNSHLNGIKGNIINSLS*LEALHK
Trigger: TTTATGGAGTGCCTCAAGCCAAGATAGTGAATTTAT...TATGTTCCCTTTTATACCATTTAGGTGTGAGTTCCTTAGCTTCTGCCTATAGGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR GCA 90 bp AACTCACACCTAAATGGTATAAAAGGGAACATAATGGGAAAATCCCTGGTTACAGTAAATCTTTATATTTaGTATGGCGTTGCACTAGAG +
Preference number: 4 (lower is better)
Translates to: NSHLNGIKGNIMGKSLVTVNLYI*YGVALE
Trigger: CTCTAGTGCAACGCCATAGCAAATATAAAGATTTAC...TGTAACCAGGGATTTTCCCATTATGTTCCCTTTTATACCATTTAGGTGTGAGTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR CCA 90 bp AACTCACACCTAAATGGTATAAAAGGGAACATAATGGGAAAATCCCTGGTTACAATAAATTCACTATCTTaGCTTGAGGCACTCCATAAA +
Preference number: 4 (lower is better)
Translates to: NSHLNGIKGNIMGKSLVTINSLS*LEALHK
Trigger: TTTATGGAGTGCCTCAAGCCAAGATAGTGAATTTAT...TGTAACCAGGGATTTTCCCATTATGTTCCCTTTTATACCATTTAGGTGTGAGTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS CCA 90 bp CGGTGGTGGCGATGGCTTCTCGGGGGTGTTGGGCGGTGGCCGCTGTaGTCAGGGAGGCAGTTGCGAGTCGCTGGGGCCGCCGCCTGCGTC +
Preference number: 5 (lower is better)
Translates to: RWWRWLLGGVGRWPL*SGRQLRVAGAAACV
Trigger: GACGCAGGCGGCGGCCCCAGCGACTCGCAACTGCCTCCCTGACCACAGCGGCCACCGCCCAACACCCCCGAGAAGCCATCGCCACCACCG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000271583.7
ENST00000528443.6
ENST00000606911.7
CDS CCA 90 bp GGGCATGAGCTCCACCGAGGCGCGCGCCCGCCCCCGCGCGTTCCCTaGCTCGCGGCTGGGACTGTTACCTCCGCGGTCCTCACCTTCAGA +
Preference number: 5 (lower is better)
Translates to: GHELHRGARPPPRVP*LAAGTVTSAVLTFR
Trigger: TCTGAAGGTGAGGACCGCGGAGGTAACAGTCCCAGCCGCGAGCCAGGGAACGCGCGGGGGCGGGCGCGCGCCTCGGTGGAGCTCATGCCC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000529091.5
CDS GCA 90 bp TTCTCGGGGGTGTTGGGCGGTGGCCGCTGTGGTCAGGGAGGCAGTTaGGAGTCGCTGGGGCCGCCGCCTGCGTCGTCGCTGCTGTGTAGC +
Preference number: 5 (lower is better)
Translates to: FSGVLGGGRCGQGGS*ESLGPPPASSLLCS
Trigger: GCTACACAGCAGCGACGACGCAGGCGGCGGCCCCAGCGACTCGCAACTGCCTCCCTGACCACAGCGGCCACCGCCCAACACCCCCGAGAA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000271583.7
ENST00000528443.6
ENST00000606911.7
CDS CCA 90 bp TTCTCCTGCCGGTGGTGGCGATGGCTTCTCGGGGGTGTTGGGCGGTaGCCGCTGTGGTCAGGGAGGCAGTTGCGAGTCGCTGGGGCCGCC +
Preference number: 5 (lower is better)
Translates to: FSCRWWRWLLGGVGR*PLWSGRQLRVAGAA
Trigger: GGCGGCCCCAGCGACTCGCAACTGCCTCCCTGACCACAGCGGCCACCGCCCAACACCCCCGAGAAGCCATCGCCACCACCGGCAGGAGAA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000271583.7
ENST00000528443.6
ENST00000606911.7
CDS CCA 90 bp TGTTGGGCGGTGGCCGCTGTGGTCAGGGAGGCAGTTGCGAGTCGCTaGGGCCGCCGCCTGCGTCGTCGCTGCTGTGTAGCAAACCTGCCT +
Preference number: 5 (lower is better)
Translates to: CWAVAAVVREAVASR*GRRLRRRCCVANLP
Trigger: AGGCAGGTTTGCTACACAGCAGCGACGACGCAGGCGGCGGCCCCAGCGACTCGCAACTGCCTCCCTGACCACAGCGGCCACCGCCCAACA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271583.7
ENST00000528443.6
ENST00000606911.7
CDS CCA 90 bp TACACTTCTGGCGGCTCGTCCGAGAACCTCACTTCCCGCCGGCCCTaGCGCGACGGAGGAGTTCTGTACGCAGGCGCATCGCTGCTGCCG +
Preference number: 5 (lower is better)
Translates to: YTSGGSSENLTSRRP*RDGGVLYAGASLLP
Trigger: CGGCAGCAGCGATGCGCCTGCGTACAGAACTCCTCCGTCGCGCCAGGGCCGGCGGGAAGTGAGGTTCTCGGACGAGCCGCCAGAAGTGTA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271583.7
ENST00000528443.6
ENST00000606911.7
CDS GCA 90 bp AGGGAGGCAGTTGCGAGTCGCTGGGGCCGCCGCCTGCGTCGTCGCTaGTGTGTAGCAAACCTGCCTCTGGGCCCATGGTGTGTCTTGAGG +
Preference number: 5 (lower is better)
Translates to: REAVASRWGRRLRRR*CVANLPLGPWCVLR
Trigger: CCTCAAGACACACCATGGGCCCAGAGGCAGGTTTGCTACACAGCAGCGACGACGCAGGCGGCGGCCCCAGCGACTCGCAACTGCCTCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271583.7
ENST00000528443.6
ENST00000606911.7
CDS CCA 90 bp GGACCTTTCTTTGGCCACCAGGGGCTCGAAGTCGCCGTACACTTCTaGCGGCTCGTCCGAGAACCTCACTTCCCGCCGGCCCTGGCGCGA +
Preference number: 5 (lower is better)
Translates to: GPFFGHQGLEVAVHF*RLVREPHFPPALAR
Trigger: TCGCGCCAGGGCCGGCGGGAAGTGAGGTTCTCGGACGAGCCGCCAGAAGTGTACGGCGACTTCGAGCCCCTGGTGGCCAAAGAAAGGTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271583.7
ENST00000528443.6
ENST00000606911.7
CDS CCA 90 bp TGCCTGAGCTGGGTCAGCTGCTGTGGATCGCTCCCGCCTCCTGGCTaGAGGCACCAAAGAGGAGGAGAAGGGGGAGGAGGACGTCTCTGC +
Preference number: 5 (lower is better)
Translates to: CLSWVSCCGSLPPPG*RHQRGGEGGGGRLC
Trigger: GCAGAGACGTCCTCCTCCCCCTTCTCCTCCTCTTTGGTGCCTCCAGCCAGGAGGCGGGAGCGATCCACAGCAGCTGACCCAGCTCAGGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528443.6
CDS CCA 90 bp GCAGTGCCTGAGCTGGGTCAGCTGCTGTGGATCGCTCCCGCCTCCTaGCTGGAGGCACCAAAGAGGAGGAGAAGGGGGAGGAGGACGTCT +
Preference number: 5 (lower is better)
Translates to: AVPELGQLLWIAPAS*LEAPKRRRRGRRTS
Trigger: AGACGTCCTCCTCCCCCTTCTCCTCCTCTTTGGTGCCTCCAGCCAGGAGGCGGGAGCGATCCACAGCAGCTGACCCAGCTCAGGCACTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528443.6
CDS CCA 90 bp GAAGATGGCTTTATGGACCCTAGGTTCTCCTGCCGGTGGTGGCGATaGCTTCTCGGGGGTGTTGGGCGGTGGCCGCTGTGGTCAGGGAGG +
Preference number: 5 (lower is better)
Translates to: EDGFMDPRFSCRWWR*LLGGVGRWPLWSGR
Trigger: CCTCCCTGACCACAGCGGCCACCGCCCAACACCCCCGAGAAGCCATCGCCACCACCGGCAGGAGAACCTAGGGTCCATAAAGCCATCTTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000271583.7
ENST00000528443.6
ENST00000606911.7
CDS CCA 90 bp GTCGATCGCGAAGATGGCTTTATGGACCCTAGGTTCTCCTGCCGGTaGTGGCGATGGCTTCTCGGGGGTGTTGGGCGGTGGCCGCTGTGG +
Preference number: 5 (lower is better)
Translates to: VDREDGFMDPRFSCR*WRWLLGGVGRWPLW
Trigger: CCACAGCGGCCACCGCCCAACACCCCCGAGAAGCCATCGCCACCACCGGCAGGAGAACCTAGGGTCCATAAAGCCATCTTCGCGATCGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000271583.7
ENST00000528443.6
ENST00000606911.7
CDS CCA 90 bp GATCGCGAAGATGGCTTTATGGACCCTAGGTTCTCCTGCCGGTGGTaGCGATGGCTTCTCGGGGGTGTTGGGCGGTGGCCGCTGTGGTCA +
Preference number: 5 (lower is better)
Translates to: DREDGFMDPRFSCRW*RWLLGGVGRWPLWS
Trigger: TGACCACAGCGGCCACCGCCCAACACCCCCGAGAAGCCATCGCCACCACCGGCAGGAGAACCTAGGGTCCATAAAGCCATCTTCGCGATC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000271583.7
ENST00000528443.6
ENST00000606911.7
CDS CCA 90 bp CGCCTGCGTCGTCGCTGCTGTGTAGCAAACCTGCCTCTGGGCCCATaGTGTGTCTTGAGGGCTGTGAGAGAGGCAGTGCCTGAGCTGGGT +
Preference number: 5 (lower is better)
Translates to: RLRRRCCVANLPLGP*CVLRAVREAVPELG
Trigger: ACCCAGCTCAGGCACTGCCTCTCTCACAGCCCTCAAGACACACCATGGGCCCAGAGGCAGGTTTGCTACACAGCAGCGACGACGCAGGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528443.6
CDS GCA 90 bp GCTTTAGTCGATCGCGAAGATGGCTTTATGGACCCTAGGTTCTCCTaGCGGTGGTGGCGATGGCTTCTCGGGGGTGTTGGGCGGTGGCCG +
Preference number: 5 (lower is better)
Translates to: ALVDREDGFMDPRFS*RWWRWLLGGVGRWP
Trigger: CGGCCACCGCCCAACACCCCCGAGAAGCCATCGCCACCACCGGCAGGAGAACCTAGGGTCCATAAAGCCATCTTCGCGATCGACTAAAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000271583.7
ENST00000528443.6
ENST00000606911.7
CDS-3UTR CAA 90 bp TTGTTGCCCAGACTGGAGGGCAATAAGCATGGTCTCGGCTTACTGCAACCTCCGTGGTCAGGGAGGCAGTaGCGAGTCGCTGGGGCCGCC +
Preference number: 5 (lower is better)
Translates to: LLPRLEGNKHGLGLLQPPWSGRQ*RVAGAA
Trigger: GGCGGCCCCAGCGACTCGCAACTGCCTCCCTGACCA...CGGAGGTTGCAGTAAGCCGAGACCATGCTTATTGCCCTCCAGTCTGGGCAACAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271583.7
ENST00000528443.6
ENST00000606911.7
CDS CCA 90 bp CTGCCATCGCCCTTAAGTAAAGGAGGGGTGGGGGCGATAGAAGGATaGCAGGGCAACTTGCCTGTCCTAAGTCTAGCCGCTCGTGGCAAG +
Preference number: 5 (lower is better)
Translates to: LPSPLSKGGVGAIEG*QGNLPVLSLAARGK
Trigger: CTTGCCACGAGCGGCTAGACTTAGGACAGGCAAGTTGCCCTGCCATCCTTCTATCGCCCCCACCCCTCCTTTACTTAAGGGCGATGGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528443.6
CDS-3UTR CAA 90 bp CATTTTTGTTGCCCAGACTGGAGGGCAATAAGCATGGTCTCGGCTTACTGCAACGGCTTCTCGGGGGTGTaGGGCGGTGGCCGCTGTGGT +
Preference number: 5 (lower is better)
Translates to: HFCCPDWRAISMVSAYCNGFSGV*GGGRCG
Trigger: ACCACAGCGGCCACCGCCCAACACCCCCGAGAAGCC...GTTGCAGTAAGCCGAGACCATGCTTATTGCCCTCCAGTCTGGGCAACAAAAATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000271583.7
ENST00000528443.6
ENST00000606911.7
CDS TCA 90 bp ATAACAGGAGACGGCTGTAGCGGAGGCTGCTCTGAGTGCTGCTGCTaGAGGCGGGTAGTCCTTCGCGTCTTCATTTCCTCGGTTTCCTGG +
Preference number: 5 (lower is better)
Translates to: ITGDGCSGGCSECCC*RRVVLRVFISSVSW
Trigger: CCAGGAAACCGAGGAAATGAAGACGCGAAGGACTACCCGCCTTCAGCAGCAGCACTCAGAGCAGCCTCCGCTACAGCCGTCTCCTGTTAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271583.7
ENST00000435319.8
ENST00000528443.6
ENST00000531630.6
ENST00000606911.7
CDS TCA 90 bp TGGGAAGATGCTTCATCCTCTCCGCGGTCCTCACCTTCAGAGGAATaGGAGTCCCGCAGCCCTCTCCTGGTCATAACAGGAGACGGCTGT +
Preference number: 5 (lower is better)
Translates to: WEDASSSPRSSPSEE*ESRSPLLVITGDGC
Trigger: ACAGCCGTCTCCTGTTATGACCAGGAGAGGGCTGCGGGACTCTCATTCCTCTGAAGGTGAGGACCGCGGAGAGGATGAAGCATCTTCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527391.5
CDS-3UTR CAA 90 bp TTGTTGCCCAGACTGGAGGGCAATAAGCATGGTCTCGGCTTACTGCAACCTCCGGGCCCATGGTGTGTCTaGAGGGCTGTGAGAGAGGCA +
Preference number: 5 (lower is better)
Translates to: LLPRLEGNKHGLGLLQPPGPWCV*RAVREA
Trigger: TGCCTCTCTCACAGCCCTCAAGACACACCATGGGCC...CGGAGGTTGCAGTAAGCCGAGACCATGCTTATTGCCCTCCAGTCTGGGCAACAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528443.6
ENST00000606911.7
CDS TCA 90 bp CAGGGCAACTTGCCTGTCCTAAGTCTAGCCGCTCGTGGCAAGTGTTaGCTGCGTGTAGGAGACTCCCGTCCTATCTCCCAGTACCAAGTC +
Preference number: 5 (lower is better)
Translates to: QGNLPVLSLAARGKC*LRVGDSRPISQYQV
Trigger: GACTTGGTACTGGGAGATAGGACGGGAGTCTCCTACACGCAGTCAACACTTGCCACGAGCGGCTAGACTTAGGACAGGCAAGTTGCCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528443.6
CDS CCA 90 bp AGAAGGATGGCAGGGCAACTTGCCTGTCCTAAGTCTAGCCGCTCGTaGCAAGTGTTGACTGCGTGTAGGAGACTCCCGTCCTATCTCCCA +
Preference number: 5 (lower is better)
Translates to: RRMAGQLACPKSSRS*QVLTACRRLPSYLP
Trigger: TGGGAGATAGGACGGGAGTCTCCTACACGCAGTCAACACTTGCCACGAGCGGCTAGACTTAGGACAGGCAAGTTGCCCTGCCATCCTTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528443.6
CDS-3UTR CAA 90 bp AGAAAGGACACAAATCCCTCTCACTGGTCATACCATAACTGTAATAACTCAGCCGCTGCTGCCGCCATTTaGAGGGGCGAGCCGGCCCCT +
Preference number: 5 (lower is better)
Translates to: RKDTNPSHWSYHNCNNSAAAAAI*RGEPAP
Trigger: AGGGGCCGGCTCGCCCCTCAAAATGGCGGCAGCAGC...GGCTGAGTTATTACAGTTATGGTATGACCAGTGAGAGGGATTTGTGTCCTTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271583.7
ENST00000528443.6
ENST00000606911.7
CDS-3UTR CAA 90 bp TTGTTGCCCAGACTGGAGGGCAATAAGCATGGTCTCGGCTTACTGCAACCTCCGCTTGTCGGCTGGAGGTaGATGGTGACTGGTTTCCAA +
Preference number: 5 (lower is better)
Translates to: LLPRLEGNKHGLGLLQPPLVGWR*MVTGFQ
Trigger: TTGGAAACCAGTCACCATCAACCTCCAGCCGACAAG...CGGAGGTTGCAGTAAGCCGAGACCATGCTTATTGCCCTCCAGTCTGGGCAACAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271583.7
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR CAA 90 bp GACGTTAAACCACTCTACTACCACTTGTGGAACTCTCAAAGGGTAAATGACAAATGGTCAGGGAGGCAGTaGCGAGTCGCTGGGGCCGCC +
Preference number: 5 (lower is better)
Translates to: DVKPLYYHLWNSQRVNDKWSGRQ*RVAGAA
Trigger: GGCGGCCCCAGCGACTCGCAACTGCCTCCCTGACCA...TTTGTCATTTACCCTTTGAGAGTTCCACAAGTGGTAGTAGAGTGGTTTAACGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606911.7
CDS-3UTR CAA 90 bp TTGTTGCCCAGACTGGAGGGCAATAAGCATGGTCTCGGCTTACTGCAACCTCCGGTTGCACTAGAGGACTaGGACTGCAACAAGTGGATG +
Preference number: 5 (lower is better)
Translates to: LLPRLEGNKHGLGLLQPPVALED*DCNKWM
Trigger: CATCCACTTGTTGCAGTCCAAGTCCTCTAGTGCAAC...CGGAGGTTGCAGTAAGCCGAGACCATGCTTATTGCCCTCCAGTCTGGGCAACAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR CAA 90 bp TCCTATAGGCAGAAGCTAAGGAACTCACACCTAAATGGTATAAAAGGGAACATATGGTCAGGGAGGCAGTaGCGAGTCGCTGGGGCCGCC +
Preference number: 5 (lower is better)
Translates to: SYRQKLRNSHLNGIKGNIWSGRQ*RVAGAA
Trigger: GGCGGCCCCAGCGACTCGCAACTGCCTCCCTGACCA...TATGTTCCCTTTTATACCATTTAGGTGTGAGTTCCTTAGCTTCTGCCTATAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271583.7
ENST00000528443.6
ENST00000606911.7
CDS-3UTR CAA 90 bp TCCTATAGGCAGAAGCTAAGGAACTCACACCTAAATGGTATAAAAGGGAACATAGCTGCTGCCGCCATTTaGAGGGGCGAGCCGGCCCCT +
Preference number: 5 (lower is better)
Translates to: SYRQKLRNSHLNGIKGNIAAAAI*RGEPAP
Trigger: AGGGGCCGGCTCGCCCCTCAAAATGGCGGCAGCAGC...TATGTTCCCTTTTATACCATTTAGGTGTGAGTTCCTTAGCTTCTGCCTATAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000271583.7
ENST00000528443.6
ENST00000606911.7
CDS-3UTR CAA 90 bp CATAGTAAATCTTTATATTTGCTATGGCGTTGCACTAGAGGACTTGGACTGCAAGCTGCTGCCGCCATTTaGAGGGGCGAGCCGGCCCCT +
Preference number: 5 (lower is better)
Translates to: HSKSLYLLWRCTRGLGLQAAAAI*RGEPAP
Trigger: AGGGGCCGGCTCGCCCCTCAAAATGGCGGCAGCAGC...TTGCAGTCCAAGTCCTCTAGTGCAACGCCATAGCAAATATAAAGATTTACTATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000528443.6
ENST00000606911.7
CDS-3UTR CAA 90 bp TTGTTGCCCAGACTGGAGGGCAATAAGCATGGTCTCGGCTTACTGCAACCTCCGACTAAGGCTACATCTTaGAAGGCCGCGTTTTCATGG +
Preference number: 5 (lower is better)
Translates to: LLPRLEGNKHGLGLLQPPTKATS*KAAFSW
Trigger: CCATGAAAACGCGGCCTTCAAAGATGTAGCCTTAGT...CGGAGGTTGCAGTAAGCCGAGACCATGCTTATTGCCCTCCAGTCTGGGCAACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271583.7
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR CAA 90 bp AAGCTAAGGAACTCACACCTAAATGGTATAAAAGGGAACATAATGGGAAAATCCGGCTTCTCGGGGGTGTaGGGCGGTGGCCGCTGTGGT +
Preference number: 5 (lower is better)
Translates to: KLRNSHLNGIKGNIMGKSGFSGV*GGGRCG
Trigger: ACCACAGCGGCCACCGCCCAACACCCCCGAGAAGCC...GGATTTTCCCATTATGTTCCCTTTTATACCATTTAGGTGTGAGTTCCTTAGCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000271583.7
ENST00000528443.6
ENST00000606911.7
CDS-3UTR CAA 90 bp CATTTTTGTTGCCCAGACTGGAGGGCAATAAGCATGGTCTCGGCTTACTGCAACCTTGTCGGCTGGAGGTaGATGGTGACTGGTTTCCAA +
Preference number: 5 (lower is better)
Translates to: HFCCPDWRAISMVSAYCNLVGWR*MVTGFQ
Trigger: TTGGAAACCAGTCACCATCAACCTCCAGCCGACAAG...GTTGCAGTAAGCCGAGACCATGCTTATTGCCCTCCAGTCTGGGCAACAAAAATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000271583.7
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR CAA 90 bp TGCACTAGAGGACTTGGACTGCAACAAGTGGATGCGCGGAAAATGAAATCTTCTCGCTCGTGGCAAGTGTaGACTGCGTGTAGGAGACTC +
Preference number: 5 (lower is better)
Translates to: CTRGLGLQQVDARKMKSSRSWQV*TACRRL
Trigger: GAGTCTCCTACACGCAGTCAACACTTGCCACGAGCG...AGAAGATTTCATTTTCCGCGCATCCACTTGTTGCAGTCCAAGTCCTCTAGTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528443.6
CDS TCA 90 bp AGGTTACTTTGTCAGTCTGATTTGCCAGACTACTTGAGGTTACAGTaGCGGCCACCAAAGTGGCAGATTTTTGGCAGGGACCACCACACC +
Preference number: 5 (lower is better)
Translates to: RLLCQSDLPDYLRLQ*RPPKWQIFGRDHHT
Trigger: GGTGTGGTGGTCCCTGCCAAAAATCTGCCACTTTGGTGGCCGTCACTGTAACCTCAAGTAGTCTGGCAAATCAGACTGACAAAGTAACCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000529091.5
CDS-3UTR CAA 90 bp CATTTTTGTTGCCCAGACTGGAGGGCAATAAGCATGGTCTCGGCTTACTGCAACTCCTGGTCCTTATTCTaGCAGTTTGTGGGGCCCATT +
Preference number: 5 (lower is better)
Translates to: HFCCPDWRAISMVSAYCNSWSLF*QFVGPI
Trigger: AATGGGCCCCACAAACTGCAAGAATAAGGACCAGGA...GTTGCAGTAAGCCGAGACCATGCTTATTGCCCTCCAGTCTGGGCAACAAAAATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000271583.7
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR CAA 90 bp TTTTGTTGCCCAGACTGGAGGGCAATAAGCATGGTCTCGGCTTACTGCAACCTCACTAAGGCTACATCTTaGAAGGCCGCGTTTTCATGG +
Preference number: 5 (lower is better)
Translates to: FCCPDWRAISMVSAYCNLTKATS*KAAFSW
Trigger: CCATGAAAACGCGGCCTTCAAAGATGTAGCCTTAGT...GAGGTTGCAGTAAGCCGAGACCATGCTTATTGCCCTCCAGTCTGGGCAACAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271583.7
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS TCA 90 bp GCTTCTTCAGCATCTCGGGCAGCAGTGAGCAGTAAGATAGCAGGCTaGGACCGAGGATGGGAGCTATTAAGATGTTTTTCCAGGAATGTT +
Preference number: 5 (lower is better)
Translates to: ASSASRAAVSSKIAG*DRGWELLRCFSRNV
Trigger: AACATTCCTGGAAAAACATCTTAATAGCTCCCATCCTCGGTCTCAGCCTGCTATCTTACTGCTCACTGCTGCCCGAGATGCTGAAGAAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000271583.7
ENST00000435319.8
ENST00000447964.1
ENST00000528443.6
ENST00000606911.7
CDS GCA 90 bp TTCTTTGGTAGGAGGCTTCCTCACTTGTCTGCTTTTGTTCACCACTaGACCCTCAAATCAAAGCATGGAGACTGGCCCAAAGTAGGTGCT +
Preference number: 5 (lower is better)
Translates to: FFGRRLPHLSAFVHH*TLKSKHGDWPKVGA
Trigger: AGCACCTACTTTGGGCCAGTCTCCATGCTTTGATTTGAGGGTGCAGTGGTGAACAAAAGCAGACAAGTGAGGAAGCCTCCTACCAAAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527867.5
CDS-3UTR CAA 90 bp GTTGGACACTGGTGGCTTCATATCTTGGGTATCTTAGAGGGGGTCGACGTAACCGAAATTGACCTTCTGTaGGACACTGGTGGCTTCATA +
Preference number: 5 (lower is better)
Translates to: VGHWWLHILGILEGVDVTEIDLL*DTGGFI
Trigger: TATGAAGCCACCAGTGTCCAACAGAAGGTCAATTTC...GGTTACGTCGACCCCCTCTAAGATACCCAAGATATGAAGCCACCAGTGTCCAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000529091.5
CDS-3UTR CAA 90 bp CAAGTGGATGCGCGGAAAATGAAATCTTCTTCAATAGCCCAGGACAGCTGGTTACTTGTCGGCTGGAGGTaGATGGTGACTGGTTTCCAA +
Preference number: 5 (lower is better)
Translates to: QVDARKMKSSSIAQDSWLLVGWR*MVTGFQ
Trigger: TTGGAAACCAGTCACCATCAACCTCCAGCCGACAAG...TAACCAGCTGTCCTGGGCTATTGAAGAAGATTTCATTTTCCGCGCATCCACTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR CAA 90 bp TTTTGTTGCCCAGACTGGAGGGCAATAAGCATGGTCTCGGCTTACTGCAACCTCGACAGTATCACTGTCTaGAGTAGCTTTATCTGTCCC +
Preference number: 5 (lower is better)
Translates to: FCCPDWRAISMVSAYCNLDSITV*SSFICP
Trigger: GGGACAGATAAAGCTACTCAAGACAGTGATACTGTC...GAGGTTGCAGTAAGCCGAGACCATGCTTATTGCCCTCCAGTCTGGGCAACAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271583.7
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR CAA 90 bp CATTTTTGTTGCCCAGACTGGAGGGCAATAAGCATGGTCTCGGCTTACTGCAACCCTTTAGGCCTAGACTaGTTCCAAGTGTCTCTTCCT +
Preference number: 5 (lower is better)
Translates to: HFCCPDWRAISMVSAYCNPLGLD*FQVSLP
Trigger: AGGAAGAGACACTTGGAACAAGTCTAGGCCTAAAGG...GTTGCAGTAAGCCGAGACCATGCTTATTGCCCTCCAGTCTGGGCAACAAAAATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000271583.7
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS TCA 90 bp TGGTGGCTTCATATCTTGGGTATCTTAGAGGGGGTCGACGTAACCTaGTTACAAGATCTTCACTCACCTTCTTTGGTAGGAGGCTTCCTC +
Preference number: 5 (lower is better)
Translates to: WWLHILGILEGVDVT*LQDLHSPSLVGGFL
Trigger: GAGGAAGCCTCCTACCAAAGAAGGTGAGTGAAGATCTTGTAATCAGGTTACGTCGACCCCCTCTAAGATACCCAAGATATGAAGCCACCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527867.5
CDS CCA 90 bp ACTGGAGCCTCTTGTATGCTCCTGACAGTTTTCTTTGAGATCGTTTaGCTTAAATCAGTTTGGGAAGATGCTTCATCCTCTCCGCGGTCC +
Preference number: 5 (lower is better)
Translates to: TGASCMLLTVFFEIV*LKSVWEDASSSPRS
Trigger: GGACCGCGGAGAGGATGAAGCATCTTCCCAAACTGATTTAAGCCAAACGATCTCAAAGAAAACTGTCAGGAGCATACAAGAGGCTCCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527391.5
CDS-3UTR CAA 90 bp CATTTTTGTTGCCCAGACTGGAGGGCAATAAGCATGGTCTCGGCTTACTGCAACGCTGTGAGAGCTGTCTaGATCATCTTCTTCAGTTTC +
Preference number: 5 (lower is better)
Translates to: HFCCPDWRAISMVSAYCNAVRAV*IIFFSF
Trigger: GAAACTGAAGAAGATGATCAAGACAGCTCTCACAGC...GTTGCAGTAAGCCGAGACCATGCTTATTGCCCTCCAGTCTGGGCAACAAAAATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000271583.7
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR CAA 90 bp TGCACTAGAGGACTTGGACTGCAACAAGTGGATGCGCGGAAAATGAAATCTTCTAGATGCATTTTGGGGTaGTCCAGTCACTTGTCGGCT +
Preference number: 5 (lower is better)
Translates to: CTRGLGLQQVDARKMKSSRCILG*SSHLSA
Trigger: AGCCGACAAGTGACTGGACAACCCCAAAATGCATCT...AGAAGATTTCATTTTCCGCGCATCCACTTGTTGCAGTCCAAGTCCTCTAGTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR CAA 90 bp TTTTGTTGCCCAGACTGGAGGGCAATAAGCATGGTCTCGGCTTACTGCAACCTCCAGAATGCTGTCATTTaGCATCCTGGTCCTTATTCT +
Preference number: 5 (lower is better)
Translates to: FCCPDWRAISMVSAYCNLQNAVI*HPGPYS
Trigger: AGAATAAGGACCAGGATGCAAAATGACAGCATTCTG...GAGGTTGCAGTAAGCCGAGACCATGCTTATTGCCCTCCAGTCTGGGCAACAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR CAA 90 bp GACGTTAAACCACTCTACTACCACTTGTGGAACTCTCAAAGGGTAAATGACAAACCTTATTCTTGCAGTTaGTGGGGCCCATTCCTGGGG +
Preference number: 5 (lower is better)
Translates to: DVKPLYYHLWNSQRVNDKPYSCS*WGPFLG
Trigger: CCCCAGGAATGGGCCCCACAAACTGCAAGAATAAGG...TTTGTCATTTACCCTTTGAGAGTTCCACAAGTGGTAGTAGAGTGGTTTAACGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435319.8
ENST00000606911.7
CDS-3UTR CAA 90 bp TGCACTAGAGGACTTGGACTGCAACAAGTGGATGCGCGGAAAATGAAATCTTCTCACCACCGGTTCCTCTaGACAAAAGATGCATTTTGG +
Preference number: 5 (lower is better)
Translates to: CTRGLGLQQVDARKMKSSHHRFL*TKDAFW
Trigger: CCAAAATGCATCTTTTGTCAAGAGGAACCGGTGGTG...AGAAGATTTCATTTTCCGCGCATCCACTTGTTGCAGTCCAAGTCCTCTAGTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR CAA 90 bp CATTTTTGTTGCCCAGACTGGAGGGCAATAAGCATGGTCTCGGCTTACTGCAACATAGGCATCAGCAATTaGTTCACTCAGACACCTAAG +
Preference number: 5 (lower is better)
Translates to: HFCCPDWRAISMVSAYCNIGISN*FTQTPK
Trigger: CTTAGGTGTCTGAGTGAACAAATTGCTGATGCCTAT...GTTGCAGTAAGCCGAGACCATGCTTATTGCCCTCCAGTCTGGGCAACAAAAATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000271583.7
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR CAA 90 bp TGCACTAGAGGACTTGGACTGCAACAAGTGGATGCGCGGAAAATGAAATCTTCTACTAAGGCTACATCTTaGAAGGCCGCGTTTTCATGG +
Preference number: 5 (lower is better)
Translates to: CTRGLGLQQVDARKMKSSTKATS*KAAFSW
Trigger: CCATGAAAACGCGGCCTTCAAAGATGTAGCCTTAGT...AGAAGATTTCATTTTCCGCGCATCCACTTGTTGCAGTCCAAGTCCTCTAGTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR CAA 90 bp CAAGTGGATGCGCGGAAAATGAAATCTTCTTCAATAGCCCAGGACAGCTGGTTAACTAAGGCTACATCTTaGAAGGCCGCGTTTTCATGG +
Preference number: 5 (lower is better)
Translates to: QVDARKMKSSSIAQDSWLTKATS*KAAFSW
Trigger: CCATGAAAACGCGGCCTTCAAAGATGTAGCCTTAGT...TAACCAGCTGTCCTGGGCTATTGAAGAAGATTTCATTTTCCGCGCATCCACTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR CAA 90 bp CAAGTGGATGCGCGGAAAATGAAATCTTCTTCAATAGCCCAGGACAGCTGGTTACCTTTAGGCCTAGACTaGTTCCAAGTGTCTCTTCCT +
Preference number: 5 (lower is better)
Translates to: QVDARKMKSSSIAQDSWLPLGLD*FQVSLP
Trigger: AGGAAGAGACACTTGGAACAAGTCTAGGCCTAAAGG...TAACCAGCTGTCCTGGGCTATTGAAGAAGATTTCATTTTCCGCGCATCCACTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR CAA 90 bp CAAGTGGATGCGCGGAAAATGAAATCTTCTTCAATAGCCCAGGACAGCTGGTTAGGAGTTTCATTTTTGTaGCCCAGACTGGAGGGCAAT +
Preference number: 5 (lower is better)
Translates to: QVDARKMKSSSIAQDSWLGVSFL*PRLEGN
Trigger: ATTGCCCTCCAGTCTGGGCAACAAAAATGAAACTCC...TAACCAGCTGTCCTGGGCTATTGAAGAAGATTTCATTTTCCGCGCATCCACTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR CAA 90 bp CATTTTTGTTGCCCAGACTGGAGGGCAATAAGCATGGTCTCGGCTTACTGCAACCAGAATGCTGTCATTTaGCATCCTGGTCCTTATTCT +
Preference number: 5 (lower is better)
Translates to: HFCCPDWRAISMVSAYCNQNAVI*HPGPYS
Trigger: AGAATAAGGACCAGGATGCAAAATGACAGCATTCTG...GTTGCAGTAAGCCGAGACCATGCTTATTGCCCTCCAGTCTGGGCAACAAAAATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR CAA 90 bp AACTCACACCTAAATGGTATAAAAGGGAACATAATGGGAAAATCCCTGGTTACAGGCCCATGGTGTGTCTaGAGGGCTGTGAGAGAGGCA +
Preference number: 5 (lower is better)
Translates to: NSHLNGIKGNIMGKSLVTGPWCV*RAVREA
Trigger: TGCCTCTCTCACAGCCCTCAAGACACACCATGGGCC...TGTAACCAGGGATTTTCCCATTATGTTCCCTTTTATACCATTTAGGTGTGAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000528443.6
ENST00000606911.7
CDS CCA 90 bp TTTTGGGGTTGTCCAGTCACTTGTCGGCTGGAGGTTGATGGTGACTaGTTTCCAAGCTCTGATTTCAGAATGCTGTCATCATCTGAAAAA +
Preference number: 5 (lower is better)
Translates to: FWGCPVTCRLEVDGD*FPSSDFRMLSSSEK
Trigger: TTTTTCAGATGATGACAGCATTCTGAAATCAGAGCTTGGAAACCAGTCACCATCAACCTCCAGCCGACAAGTGACTGGACAACCCCAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271583.7
CDS CCA 90 bp GCTGGAGCCTCTTGTATGCTCCTGACAGTTTTCTTTGAGATCGTTTaGCTTAAATCAGTTTGGGAAGATGCTTCATCCTCTTCACGAGTC +
Preference number: 5 (lower is better)
Translates to: AGASCMLLTVFFEIV*LKSVWEDASSSSRV
Trigger: GACTCGTGAAGAGGATGAAGCATCTTCCCAAACTGATTTAAGCCAAACGATCTCAAAGAAAACTGTCAGGAGCATACAAGAGGCTCCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527867.5
ENST00000531726.5
CDS-3UTR CAA 90 bp AGAAAGGACACAAATCCCTCTCACTGGTCATACCATAACTGTAATAACTCAGCCCACTGCTGGAGCCTCTaGTATGCTCCTGACAGTTTT +
Preference number: 5 (lower is better)
Translates to: RKDTNPSHWSYHNCNNSAHCWSL*YAPDSF
Trigger: AAAACTGTCAGGAGCATACAAGAGGCTCCAGCAGTG...GGCTGAGTTATTACAGTTATGGTATGACCAGTGAGAGGGATTTGTGTCCTTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271583.7
ENST00000528443.6
CDS-3UTR CAA 90 bp CAAGTGGATGCGCGGAAAATGAAATCTTCTTCAATAGCCCAGGACAGCTGGTTAGCTGTGAGAGCTGTCTaGATCATCTTCTTCAGTTTC +
Preference number: 5 (lower is better)
Translates to: QVDARKMKSSSIAQDSWLAVRAV*IIFFSF
Trigger: GAAACTGAAGAAGATGATCAAGACAGCTCTCACAGC...TAACCAGCTGTCCTGGGCTATTGAAGAAGATTTCATTTTCCGCGCATCCACTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR CAA 90 bp TCCTATAGGCAGAAGCTAAGGAACTCACACCTAAATGGTATAAAAGGGAACATACCTTATTCTTGCAGTTaGTGGGGCCCATTCCTGGGG +
Preference number: 5 (lower is better)
Translates to: SYRQKLRNSHLNGIKGNIPYSCS*WGPFLG
Trigger: CCCCAGGAATGGGCCCCACAAACTGCAAGAATAAGG...TATGTTCCCTTTTATACCATTTAGGTGTGAGTTCCTTAGCTTCTGCCTATAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271583.7
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR CAA 90 bp AAGGAACTCACACCTAAATGGTATAAAAGGGAACATAATGGGAAAATCCCTGGTCCTTATTCTTGCAGTTaGTGGGGCCCATTCCTGGGG +
Preference number: 5 (lower is better)
Translates to: KELTPKWYKREHNGKIPGPYSCS*WGPFLG
Trigger: CCCCAGGAATGGGCCCCACAAACTGCAAGAATAAGG...ACCAGGGATTTTCCCATTATGTTCCCTTTTATACCATTTAGGTGTGAGTTCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000271583.7
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR CAA 90 bp AGAAAGGACACAAATCCCTCTCACTGGTCATACCATAACTGTAATAACTCAGCCTCCTGGTCCTTATTCTaGCAGTTTGTGGGGCCCATT +
Preference number: 5 (lower is better)
Translates to: RKDTNPSHWSYHNCNNSASWSLF*QFVGPI
Trigger: AATGGGCCCCACAAACTGCAAGAATAAGGACCAGGA...GGCTGAGTTATTACAGTTATGGTATGACCAGTGAGAGGGATTTGTGTCCTTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271583.7
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR CAA 90 bp CATTTTTGTTGCCCAGACTGGAGGGCAATAAGCATGGTCTCGGCTTACTGCAACAAAAACTGCCATATATaGAACTCTTGCCTGGTGAAG +
Preference number: 5 (lower is better)
Translates to: HFCCPDWRAISMVSAYCNKNCHI*NSCLVK
Trigger: CTTCACCAGGCAAGAGTTCAATATATGGCAGTTTTT...GTTGCAGTAAGCCGAGACCATGCTTATTGCCCTCCAGTCTGGGCAACAAAAATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000271583.7
CDS-3UTR CAA 90 bp CAAGTGGATGCGCGGAAAATGAAATCTTCTTCAATAGCCCAGGACAGCTGGTTAGACAAAAGATGCATTTaGGGGTTGTCCAGTCACTTG +
Preference number: 5 (lower is better)
Translates to: QVDARKMKSSSIAQDSWLDKRCI*GLSSHL
Trigger: CAAGTGACTGGACAACCCCAAAATGCATCTTTTGTC...TAACCAGCTGTCCTGGGCTATTGAAGAAGATTTCATTTTCCGCGCATCCACTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR CAA 90 bp CAAGTGGATGCGCGGAAAATGAAATCTTCTTCAATAGCCCAGGACAGCTGGTTAGACAGTATCACTGTCTaGAGTAGCTTTATCTGTCCC +
Preference number: 5 (lower is better)
Translates to: QVDARKMKSSSIAQDSWLDSITV*SSFICP
Trigger: GGGACAGATAAAGCTACTCAAGACAGTGATACTGTC...TAACCAGCTGTCCTGGGCTATTGAAGAAGATTTCATTTTCCGCGCATCCACTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR CAA 90 bp AACAGTAGTGACACTGCTGTGAGAGCTGTCTTGATCATCTTCTTCAGTTTCTCCACTCACTGGAGCCTCTaGTATGCTCCTGACAGTTTT +
Preference number: 5 (lower is better)
Translates to: NSSDTAVRAVLIIFFSFSTHWSL*YAPDSF
Trigger: AAAACTGTCAGGAGCATACAAGAGGCTCCAGTGAGT...GGAGAAACTGAAGAAGATGATCAAGACAGCTCTCACAGCAGTGTCACTACTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529091.5
CDS-3UTR CAA 90 bp GGATCTGGCCTTAACAGTAGTGACACTGCTGTGAGAGCTGTCTTGATCATCTTCCTTTGTCAGTCTGATTaGCCAGACTACTTGAGGTTA +
Preference number: 5 (lower is better)
Translates to: GSGLNSSDTAVRAVLIIFLCQSD*PDYLRL
Trigger: TAACCTCAAGTAGTCTGGCAAATCAGACTGACAAAG...GAAGATGATCAAGACAGCTCTCACAGCAGTGTCACTACTGTTAAGGCCAGATCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529091.5
CDS-3UTR CAA 90 bp AAGCTAAGGAACTCACACCTAAATGGTATAAAAGGGAACATAATGGGAAAATCCGGATGGCAGGGCAACTaGCCTGTCCTAAGTCTAGCC +
Preference number: 5 (lower is better)
Translates to: KLRNSHLNGIKGNIMGKSGWQGN*PVLSLA
Trigger: GGCTAGACTTAGGACAGGCAAGTTGCCCTGCCATCC...GGATTTTCCCATTATGTTCCCTTTTATACCATTTAGGTGTGAGTTCCTTAGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528443.6
CDS CCA 90 bp GCTGGAGCCTCTTGTATGCTCCTGACAGTTTTCTTTGAGATCGTTTaGCTTAAATCAGTTTGGGAAGATGCTTCATCCTCTTCAGAGGAA +
Preference number: 5 (lower is better)
Translates to: AGASCMLLTVFFEIV*LKSVWEDASSSSEE
Trigger: TTCCTCTGAAGAGGATGAAGCATCTTCCCAAACTGATTTAAGCCAAACGATCTCAAAGAAAACTGTCAGGAGCATACAAGAGGCTCCAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271583.7
ENST00000528443.6
CDS CCA 90 bp ACTGGAGCCTCTTGTATGCTCCTGACAGTTTTCTTTGAGATCGTTTaGCTTAAATCAGTTTGGGAAGATGCTTCATCCTCTTCACGAGTC +
Preference number: 5 (lower is better)
Translates to: TGASCMLLTVFFEIV*LKSVWEDASSSSRV
Trigger: GACTCGTGAAGAGGATGAAGCATCTTCCCAAACTGATTTAAGCCAAACGATCTCAAAGAAAACTGTCAGGAGCATACAAGAGGCTCCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474875.5
ENST00000524653.1
CDS-3UTR CAA 90 bp AAGCTAAGGAACTCACACCTAAATGGTATAAAAGGGAACATAATGGGAAAATCCCCTTATTCTTGCAGTTaGTGGGGCCCATTCCTGGGG +
Preference number: 5 (lower is better)
Translates to: KLRNSHLNGIKGNIMGKSPYSCS*WGPFLG
Trigger: CCCCAGGAATGGGCCCCACAAACTGCAAGAATAAGG...GGATTTTCCCATTATGTTCCCTTTTATACCATTTAGGTGTGAGTTCCTTAGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000271583.7
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR CAA 90 bp AGAAAGGACACAAATCCCTCTCACTGGTCATACCATAACTGTAATAACTCAGCCCACCACCGGTTCCTCTaGACAAAAGATGCATTTTGG +
Preference number: 5 (lower is better)
Translates to: RKDTNPSHWSYHNCNNSAHHRFL*TKDAFW
Trigger: CCAAAATGCATCTTTTGTCAAGAGGAACCGGTGGTG...GGCTGAGTTATTACAGTTATGGTATGACCAGTGAGAGGGATTTGTGTCCTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271583.7
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR CAA 90 bp TGCACTAGAGGACTTGGACTGCAACAAGTGGATGCGCGGAAAATGAAATCTTCTTTTTTCCAGGAATGTTaGGCTCCTTTTCCACAGCTT +
Preference number: 5 (lower is better)
Translates to: CTRGLGLQQVDARKMKSSFFQEC*APFPQL
Trigger: AAGCTGTGGAAAAGGAGCCAAACATTCCTGGAAAAA...AGAAGATTTCATTTTCCGCGCATCCACTTGTTGCAGTCCAAGTCCTCTAGTGCA
44% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR CAA 90 bp CAAGTGGATGCGCGGAAAATGAAATCTTCTTCAATAGCCCAGGACAGCTGGTTATTTTTCCAGGAATGTTaGGCTCCTTTTCCACAGCTT +
Preference number: 5 (lower is better)
Translates to: QVDARKMKSSSIAQDSWLFFQEC*APFPQL
Trigger: AAGCTGTGGAAAAGGAGCCAAACATTCCTGGAAAAA...TAACCAGCTGTCCTGGGCTATTGAAGAAGATTTCATTTTCCGCGCATCCACTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR CAA 90 bp GTAAATCTTTATATTTGCTATGGCGTTGCACTAGAGGACTTGGACTGCAACAAGGTTGCACTAGAGGACTaGGACTGCAACAAGTGGATG +
Preference number: 5 (lower is better)
Translates to: VNLYICYGVALEDLDCNKVALED*DCNKWM
Trigger: CATCCACTTGTTGCAGTCCAAGTCCTCTAGTGCAAC...CTTGTTGCAGTCCAAGTCCTCTAGTGCAACGCCATAGCAAATATAAAGATTTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR CAA 90 bp AGAAAGGACACAAATCCCTCTCACTGGTCATACCATAACTGTAATAACTCAGCCCCACTCTACTACCACTaGTGGAACTCTCAAAGGGTA +
Preference number: 5 (lower is better)
Translates to: RKDTNPSHWSYHNCNNSAPLYYH*WNSQRV
Trigger: TACCCTTTGAGAGTTCCACAAGTGGTAGTAGAGTGG...GGCTGAGTTATTACAGTTATGGTATGACCAGTGAGAGGGATTTGTGTCCTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435319.8
ENST00000606911.7
CDS CCA 90 bp ACTGGAGCCTCTTGTATGCTCCTGACAGTTTTCTTTGAGATCGTTTaGCTTAAATCAGTTTGGGAAGATGCTTCATCCTCTTCAGAGGAA +
Preference number: 5 (lower is better)
Translates to: TGASCMLLTVFFEIV*LKSVWEDASSSSEE
Trigger: TTCCTCTGAAGAGGATGAAGCATCTTCCCAAACTGATTTAAGCCAAACGATCTCAAAGAAAACTGTCAGGAGCATACAAGAGGCTCCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000435319.8
ENST00000531630.6
ENST00000606911.7
CDS-3UTR CAA 90 bp AGAAAGGACACAAATCCCTCTCACTGGTCATACCATAACTGTAATAACTCAGCCGAAATTGACCTTCTGTaGGACACTGGTGGCTTCATA +
Preference number: 5 (lower is better)
Translates to: RKDTNPSHWSYHNCNNSAEIDLL*DTGGFI
Trigger: TATGAAGCCACCAGTGTCCAACAGAAGGTCAATTTC...GGCTGAGTTATTACAGTTATGGTATGACCAGTGAGAGGGATTTGTGTCCTTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271583.7
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR CAA 90 bp CATAGTAAATCTTTATATTTGCTATGGCGTTGCACTAGAGGACTTGGACTGCAATCCTGGTCCTTATTCTaGCAGTTTGTGGGGCCCATT +
Preference number: 5 (lower is better)
Translates to: HSKSLYLLWRCTRGLGLQSWSLF*QFVGPI
Trigger: AATGGGCCCCACAAACTGCAAGAATAAGGACCAGGA...TTGCAGTCCAAGTCCTCTAGTGCAACGCCATAGCAAATATAAAGATTTACTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR CAA 90 bp AGAAAGGACACAAATCCCTCTCACTGGTCATACCATAACTGTAATAACTCAGCCGACAAAAGATGCATTTaGGGGTTGTCCAGTCACTTG +
Preference number: 5 (lower is better)
Translates to: RKDTNPSHWSYHNCNNSADKRCI*GLSSHL
Trigger: CAAGTGACTGGACAACCCCAAAATGCATCTTTTGTC...GGCTGAGTTATTACAGTTATGGTATGACCAGTGAGAGGGATTTGTGTCCTTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271583.7
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR CAA 90 bp GTAAATCTTTATATTTGCTATGGCGTTGCACTAGAGGACTTGGACTGCAACAAGCACCACCGGTTCCTCTaGACAAAAGATGCATTTTGG +
Preference number: 5 (lower is better)
Translates to: VNLYICYGVALEDLDCNKHHRFL*TKDAFW
Trigger: CCAAAATGCATCTTTTGTCAAGAGGAACCGGTGGTG...CTTGTTGCAGTCCAAGTCCTCTAGTGCAACGCCATAGCAAATATAAAGATTTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR CAA 90 bp GTAAATCTTTATATTTGCTATGGCGTTGCACTAGAGGACTTGGACTGCAACAAGCCTTTAGGCCTAGACTaGTTCCAAGTGTCTCTTCCT +
Preference number: 5 (lower is better)
Translates to: VNLYICYGVALEDLDCNKPLGLD*FQVSLP
Trigger: AGGAAGAGACACTTGGAACAAGTCTAGGCCTAAAGG...CTTGTTGCAGTCCAAGTCCTCTAGTGCAACGCCATAGCAAATATAAAGATTTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR CAA 90 bp CAAGTGGATGCGCGGAAAATGAAATCTTCTTCAATAGCCCAGGACAGCTGGTTAATTCACTATCTTGGCTaGAGGCACTCCATAAAATGT +
Preference number: 5 (lower is better)
Translates to: QVDARKMKSSSIAQDSWLIHYLG*RHSIKC
Trigger: ACATTTTATGGAGTGCCTCAAGCCAAGATAGTGAAT...TAACCAGCTGTCCTGGGCTATTGAAGAAGATTTCATTTTCCGCGCATCCACTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR CAA 90 bp GACGTTAAACCACTCTACTACCACTTGTGGAACTCTCAAAGGGTAAATGACAAACCACTCTACTACCACTaGTGGAACTCTCAAAGGGTA +
Preference number: 5 (lower is better)
Translates to: DVKPLYYHLWNSQRVNDKPLYYH*WNSQRV
Trigger: TACCCTTTGAGAGTTCCACAAGTGGTAGTAGAGTGG...TTTGTCATTTACCCTTTGAGAGTTCCACAAGTGGTAGTAGAGTGGTTTAACGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435319.8
ENST00000606911.7
CDS-3UTR CAA 90 bp GTAAATCTTTATATTTGCTATGGCGTTGCACTAGAGGACTTGGACTGCAACAAGGAAATTGACCTTCTGTaGGACACTGGTGGCTTCATA +
Preference number: 5 (lower is better)
Translates to: VNLYICYGVALEDLDCNKEIDLL*DTGGFI
Trigger: TATGAAGCCACCAGTGTCCAACAGAAGGTCAATTTC...CTTGTTGCAGTCCAAGTCCTCTAGTGCAACGCCATAGCAAATATAAAGATTTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR CAA 90 bp AACTCACACCTAAATGGTATAAAAGGGAACATAATGGGAAAATCCCTGGTTACAAGATGCATTTTGGGGTaGTCCAGTCACTTGTCGGCT +
Preference number: 5 (lower is better)
Translates to: NSHLNGIKGNIMGKSLVTRCILG*SSHLSA
Trigger: AGCCGACAAGTGACTGGACAACCCCAAAATGCATCT...TGTAACCAGGGATTTTCCCATTATGTTCCCTTTTATACCATTTAGGTGTGAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000271583.7
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR CAA 90 bp TTCTCTAAGGAACTGCATATAATCTGCACTCCTAAGATACCTTTAACAGAGCTCCACCACCGGTTCCTCTaGACAAAAGATGCATTTTGG +
Preference number: 5 (lower is better)
Translates to: FSKELHIICTPKIPLTELHHRFL*TKDAFW
Trigger: CCAAAATGCATCTTTTGTCAAGAGGAACCGGTGGTG...GAGCTCTGTTAAAGGTATCTTAGGAGTGCAGATTATATGCAGTTCCTTAGAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271583.7
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR CAA 90 bp TCCTATAGGCAGAAGCTAAGGAACTCACACCTAAATGGTATAAAAGGGAACATACTGGTTCTGGAACTCTaGAACAGCAGTGGTTTCTAC +
Preference number: 5 (lower is better)
Translates to: SYRQKLRNSHLNGIKGNILVLEL*NSSGFY
Trigger: GTAGAAACCACTGCTGTTCAAGAGTTCCAGAACCAG...TATGTTCCCTTTTATACCATTTAGGTGTGAGTTCCTTAGCTTCTGCCTATAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271583.7
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR CAA 90 bp TTCTCTAAGGAACTGCATATAATCTGCACTCCTAAGATACCTTTAACAGAGCTCCTGGTTCTGGAACTCTaGAACAGCAGTGGTTTCTAC +
Preference number: 5 (lower is better)
Translates to: FSKELHIICTPKIPLTELLVLEL*NSSGFY
Trigger: GTAGAAACCACTGCTGTTCAAGAGTTCCAGAACCAG...GAGCTCTGTTAAAGGTATCTTAGGAGTGCAGATTATATGCAGTTCCTTAGAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271583.7
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR CAA 90 bp GTAAATCTTTATATTTGCTATGGCGTTGCACTAGAGGACTTGGACTGCAACAAGGACAGTATCACTGTCTaGAGTAGCTTTATCTGTCCC +
Preference number: 5 (lower is better)
Translates to: VNLYICYGVALEDLDCNKDSITV*SSFICP
Trigger: GGGACAGATAAAGCTACTCAAGACAGTGATACTGTC...CTTGTTGCAGTCCAAGTCCTCTAGTGCAACGCCATAGCAAATATAAAGATTTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR CAA 90 bp TGCACTAGAGGACTTGGACTGCAACAAGTGGATGCGCGGAAAATGAAATCTTCTTTGGGTGTGTTAGAATaGGTGAACTTGACTTTAAGA +
Preference number: 5 (lower is better)
Translates to: CTRGLGLQQVDARKMKSSLGVLE*VNLTLR
Trigger: TCTTAAAGTCAAGTTCACCAATTCTAACACACCCAA...AGAAGATTTCATTTTCCGCGCATCCACTTGTTGCAGTCCAAGTCCTCTAGTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR CAA 90 bp TGCACTAGAGGACTTGGACTGCAACAAGTGGATGCGCGGAAAATGAAATCTTCTATACATGAAGAATCCTaGGGACAGCCAAGAATTTTT +
Preference number: 5 (lower is better)
Translates to: CTRGLGLQQVDARKMKSSIHEES*GQPRIF
Trigger: AAAAATTCTTGGCTGTCCCAAGGATTCTTCATGTAT...AGAAGATTTCATTTTCCGCGCATCCACTTGTTGCAGTCCAAGTCCTCTAGTGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR CAA 90 bp TCCTATAGGCAGAAGCTAAGGAACTCACACCTAAATGGTATAAAAGGGAACATAGGAGTTTCATTTTTGTaGCCCAGACTGGAGGGCAAT +
Preference number: 5 (lower is better)
Translates to: SYRQKLRNSHLNGIKGNIGVSFL*PRLEGN
Trigger: ATTGCCCTCCAGTCTGGGCAACAAAAATGAAACTCC...TATGTTCCCTTTTATACCATTTAGGTGTGAGTTCCTTAGCTTCTGCCTATAGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000271583.7
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR CAA 90 bp CATAGTAAATCTTTATATTTGCTATGGCGTTGCACTAGAGGACTTGGACTGCAAGGAGTTTCATTTTTGTaGCCCAGACTGGAGGGCAAT +
Preference number: 5 (lower is better)
Translates to: HSKSLYLLWRCTRGLGLQGVSFL*PRLEGN
Trigger: ATTGCCCTCCAGTCTGGGCAACAAAAATGAAACTCC...TTGCAGTCCAAGTCCTCTAGTGCAACGCCATAGCAAATATAAAGATTTACTATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR CAA 90 bp AAGGAACTCACACCTAAATGGTATAAAAGGGAACATAATGGGAAAATCCCTGGTACTCACTGGAGCCTCTaGTATGCTCCTGACAGTTTT +
Preference number: 5 (lower is better)
Translates to: KELTPKWYKREHNGKIPGTHWSL*YAPDSF
Trigger: AAAACTGTCAGGAGCATACAAGAGGCTCCAGTGAGT...ACCAGGGATTTTCCCATTATGTTCCCTTTTATACCATTTAGGTGTGAGTTCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000435319.8
ENST00000606911.7
CDS-3UTR CAA 90 bp CTAACACTATACACTCACTTTGTCAGCATCCCTTTTGTCCATTTAGACGAAAACGCTGTGAGAGCTGTCTaGATCATCTTCTTCAGTTTC +
Preference number: 5 (lower is better)
Translates to: LTLYTHFVSIPFVHLDENAVRAV*IIFFSF
Trigger: GAAACTGAAGAAGATGATCAAGACAGCTCTCACAGC...GTTTTCGTCTAAATGGACAAAAGGGATGCTGACAAAGTGAGTGTATAGTGTTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529091.5
CDS-3UTR CAA 90 bp TCCTATAGGCAGAAGCTAAGGAACTCACACCTAAATGGTATAAAAGGGAACATAGACAAAAGATGCATTTaGGGGTTGTCCAGTCACTTG +
Preference number: 5 (lower is better)
Translates to: SYRQKLRNSHLNGIKGNIDKRCI*GLSSHL
Trigger: CAAGTGACTGGACAACCCCAAAATGCATCTTTTGTC...TATGTTCCCTTTTATACCATTTAGGTGTGAGTTCCTTAGCTTCTGCCTATAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000271583.7
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR CAA 90 bp AACTCACACCTAAATGGTATAAAAGGGAACATAATGGGAAAATCCCTGGTTACACTGGTTCTGGAACTCTaGAACAGCAGTGGTTTCTAC +
Preference number: 5 (lower is better)
Translates to: NSHLNGIKGNIMGKSLVTLVLEL*NSSGFY
Trigger: GTAGAAACCACTGCTGTTCAAGAGTTCCAGAACCAG...TGTAACCAGGGATTTTCCCATTATGTTCCCTTTTATACCATTTAGGTGTGAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271583.7
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR CAA 90 bp AAGCTAAGGAACTCACACCTAAATGGTATAAAAGGGAACATAATGGGAAAATCCCTGGTTCTGGAACTCTaGAACAGCAGTGGTTTCTAC +
Preference number: 5 (lower is better)
Translates to: KLRNSHLNGIKGNIMGKSLVLEL*NSSGFY
Trigger: GTAGAAACCACTGCTGTTCAAGAGTTCCAGAACCAG...GGATTTTCCCATTATGTTCCCTTTTATACCATTTAGGTGTGAGTTCCTTAGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271583.7
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR CAA 90 bp CATAGTAAATCTTTATATTTGCTATGGCGTTGCACTAGAGGACTTGGACTGCAAGACAGTATCACTGTCTaGAGTAGCTTTATCTGTCCC +
Preference number: 5 (lower is better)
Translates to: HSKSLYLLWRCTRGLGLQDSITV*SSFICP
Trigger: GGGACAGATAAAGCTACTCAAGACAGTGATACTGTC...TTGCAGTCCAAGTCCTCTAGTGCAACGCCATAGCAAATATAAAGATTTACTATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR CAA 90 bp AACTCACACCTAAATGGTATAAAAGGGAACATAATGGGAAAATCCCTGGTTACACCTTTAGGCCTAGACTaGTTCCAAGTGTCTCTTCCT +
Preference number: 5 (lower is better)
Translates to: NSHLNGIKGNIMGKSLVTPLGLD*FQVSLP
Trigger: AGGAAGAGACACTTGGAACAAGTCTAGGCCTAAAGG...TGTAACCAGGGATTTTCCCATTATGTTCCCTTTTATACCATTTAGGTGTGAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271583.7
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR CAA 90 bp AAGCTAAGGAACTCACACCTAAATGGTATAAAAGGGAACATAATGGGAAAATCCGGAGTTTCATTTTTGTaGCCCAGACTGGAGGGCAAT +
Preference number: 5 (lower is better)
Translates to: KLRNSHLNGIKGNIMGKSGVSFL*PRLEGN
Trigger: ATTGCCCTCCAGTCTGGGCAACAAAAATGAAACTCC...GGATTTTCCCATTATGTTCCCTTTTATACCATTTAGGTGTGAGTTCCTTAGCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000271583.7
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR CAA 90 bp AAGCTAAGGAACTCACACCTAAATGGTATAAAAGGGAACATAATGGGAAAATCCACTCACTGGAGCCTCTaGTATGCTCCTGACAGTTTT +
Preference number: 5 (lower is better)
Translates to: KLRNSHLNGIKGNIMGKSTHWSL*YAPDSF
Trigger: AAAACTGTCAGGAGCATACAAGAGGCTCCAGTGAGT...GGATTTTCCCATTATGTTCCCTTTTATACCATTTAGGTGTGAGTTCCTTAGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000435319.8
ENST00000606911.7
CDS-3UTR CAA 90 bp AGAAAGGACACAAATCCCTCTCACTGGTCATACCATAACTGTAATAACTCAGCCATTCACTATCTTGGCTaGAGGCACTCCATAAAATGT +
Preference number: 5 (lower is better)
Translates to: RKDTNPSHWSYHNCNNSAIHYLG*RHSIKC
Trigger: ACATTTTATGGAGTGCCTCAAGCCAAGATAGTGAAT...GGCTGAGTTATTACAGTTATGGTATGACCAGTGAGAGGGATTTGTGTCCTTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR CAA 90 bp AAGCTAAGGAACTCACACCTAAATGGTATAAAAGGGAACATAATGGGAAAATCCGAAATTGACCTTCTGTaGGACACTGGTGGCTTCATA +
Preference number: 5 (lower is better)
Translates to: KLRNSHLNGIKGNIMGKSEIDLL*DTGGFI
Trigger: TATGAAGCCACCAGTGTCCAACAGAAGGTCAATTTC...GGATTTTCCCATTATGTTCCCTTTTATACCATTTAGGTGTGAGTTCCTTAGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271583.7
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR CAA 90 bp AACTCACACCTAAATGGTATAAAAGGGAACATAATGGGAAAATCCCTGGTTACAGCTGTGAGAGCTGTCTaGATCATCTTCTTCAGTTTC +
Preference number: 5 (lower is better)
Translates to: NSHLNGIKGNIMGKSLVTAVRAV*IIFFSF
Trigger: GAAACTGAAGAAGATGATCAAGACAGCTCTCACAGC...TGTAACCAGGGATTTTCCCATTATGTTCCCTTTTATACCATTTAGGTGTGAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271583.7
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR CAA 90 bp TTCTCTAAGGAACTGCATATAATCTGCACTCCTAAGATACCTTTAACAGAGCTCCCATATATTGAACTCTaGCCTGGTGAAGATGTTTGC +
Preference number: 5 (lower is better)
Translates to: FSKELHIICTPKIPLTELPYIEL*PGEDVC
Trigger: GCAAACATCTTCACCAGGCAAGAGTTCAATATATGG...GAGCTCTGTTAAAGGTATCTTAGGAGTGCAGATTATATGCAGTTCCTTAGAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271583.7
CDS-3UTR CAA 90 bp TCCTATAGGCAGAAGCTAAGGAACTCACACCTAAATGGTATAAAAGGGAACATATTTTTCCAGGAATGTTaGGCTCCTTTTCCACAGCTT +
Preference number: 5 (lower is better)
Translates to: SYRQKLRNSHLNGIKGNIFFQEC*APFPQL
Trigger: AAGCTGTGGAAAAGGAGCCAAACATTCCTGGAAAAA...TATGTTCCCTTTTATACCATTTAGGTGTGAGTTCCTTAGCTTCTGCCTATAGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000271583.7
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR CAA 90 bp TTCTCTAAGGAACTGCATATAATCTGCACTCCTAAGATACCTTTAACAGAGCTCATAGGCATCAGCAATTaGTTCACTCAGACACCTAAG +
Preference number: 5 (lower is better)
Translates to: FSKELHIICTPKIPLTELIGISN*FTQTPK
Trigger: CTTAGGTGTCTGAGTGAACAAATTGCTGATGCCTAT...GAGCTCTGTTAAAGGTATCTTAGGAGTGCAGATTATATGCAGTTCCTTAGAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271583.7
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR CAA 90 bp TCCTATAGGCAGAAGCTAAGGAACTCACACCTAAATGGTATAAAAGGGAACATAATAGGCATCAGCAATTaGTTCACTCAGACACCTAAG +
Preference number: 5 (lower is better)
Translates to: SYRQKLRNSHLNGIKGNIIGISN*FTQTPK
Trigger: CTTAGGTGTCTGAGTGAACAAATTGCTGATGCCTAT...TATGTTCCCTTTTATACCATTTAGGTGTGAGTTCCTTAGCTTCTGCCTATAGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271583.7
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR CAA 90 bp AGAAAGGACACAAATCCCTCTCACTGGTCATACCATAACTGTAATAACTCAGCCATACATGAAGAATCCTaGGGACAGCCAAGAATTTTT +
Preference number: 5 (lower is better)
Translates to: RKDTNPSHWSYHNCNNSAIHEES*GQPRIF
Trigger: AAAAATTCTTGGCTGTCCCAAGGATTCTTCATGTAT...GGCTGAGTTATTACAGTTATGGTATGACCAGTGAGAGGGATTTGTGTCCTTTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271583.7
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR CAA 90 bp AACTCACACCTAAATGGTATAAAAGGGAACATAATGGGAAAATCCCTGGTTACATTTTTCCAGGAATGTTaGGCTCCTTTTCCACAGCTT +
Preference number: 5 (lower is better)
Translates to: NSHLNGIKGNIMGKSLVTFFQEC*APFPQL
Trigger: AAGCTGTGGAAAAGGAGCCAAACATTCCTGGAAAAA...TGTAACCAGGGATTTTCCCATTATGTTCCCTTTTATACCATTTAGGTGTGAGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000271583.7
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR CAA 90 bp GTAAATCTTTATATTTGCTATGGCGTTGCACTAGAGGACTTGGACTGCAACAAGTTGGGTGTGTTAGAATaGGTGAACTTGACTTTAAGA +
Preference number: 5 (lower is better)
Translates to: VNLYICYGVALEDLDCNKLGVLE*VNLTLR
Trigger: TCTTAAAGTCAAGTTCACCAATTCTAACACACCCAA...CTTGTTGCAGTCCAAGTCCTCTAGTGCAACGCCATAGCAAATATAAAGATTTAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR CAA 90 bp TCCTATAGGCAGAAGCTAAGGAACTCACACCTAAATGGTATAAAAGGGAACATAATTCACTATCTTGGCTaGAGGCACTCCATAAAATGT +
Preference number: 5 (lower is better)
Translates to: SYRQKLRNSHLNGIKGNIIHYLG*RHSIKC
Trigger: ACATTTTATGGAGTGCCTCAAGCCAAGATAGTGAAT...TATGTTCCCTTTTATACCATTTAGGTGTGAGTTCCTTAGCTTCTGCCTATAGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR CAA 90 bp TTCTCTAAGGAACTGCATATAATCTGCACTCCTAAGATACCTTTAACAGAGCTCTTGGGTGTGTTAGAATaGGTGAACTTGACTTTAAGA +
Preference number: 5 (lower is better)
Translates to: FSKELHIICTPKIPLTELLGVLE*VNLTLR
Trigger: TCTTAAAGTCAAGTTCACCAATTCTAACACACCCAA...GAGCTCTGTTAAAGGTATCTTAGGAGTGCAGATTATATGCAGTTCCTTAGAGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271583.7
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR CAA 90 bp TTCTCTAAGGAACTGCATATAATCTGCACTCCTAAGATACCTTTAACAGAGCTCATACATGAAGAATCCTaGGGACAGCCAAGAATTTTT +
Preference number: 5 (lower is better)
Translates to: FSKELHIICTPKIPLTELIHEES*GQPRIF
Trigger: AAAAATTCTTGGCTGTCCCAAGGATTCTTCATGTAT...GAGCTCTGTTAAAGGTATCTTAGGAGTGCAGATTATATGCAGTTCCTTAGAGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271583.7
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR CAA 90 bp TCCTATAGGCAGAAGCTAAGGAACTCACACCTAAATGGTATAAAAGGGAACATAATACATGAAGAATCCTaGGGACAGCCAAGAATTTTT +
Preference number: 5 (lower is better)
Translates to: SYRQKLRNSHLNGIKGNIIHEES*GQPRIF
Trigger: AAAAATTCTTGGCTGTCCCAAGGATTCTTCATGTAT...TATGTTCCCTTTTATACCATTTAGGTGTGAGTTCCTTAGCTTCTGCCTATAGGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271583.7
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS-3UTR CAA 90 bp AACTCACACCTAAATGGTATAAAAGGGAACATAATGGGAAAATCCCTGGTTACATTGGGTGTGTTAGAATaGGTGAACTTGACTTTAAGA +
Preference number: 5 (lower is better)
Translates to: NSHLNGIKGNIMGKSLVTLGVLE*VNLTLR
Trigger: TCTTAAAGTCAAGTTCACCAATTCTAACACACCCAA...TGTAACCAGGGATTTTCCCATTATGTTCCCTTTTATACCATTTAGGTGTGAGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271583.7
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS CCA 72 bp CTCCACCGAGGCGCGCGCCCGCCCCCGCGCGTTCCCTaGCTCGCGGCTGGGACTGTTACCTCCGCGGTCCTC +
Preference number: 6 (lower is better)
Translates to: LHRGARPPPRVP*LAAGTVTSAVL
Trigger: GAGGACCGCGGAGGTAACAGTCCCAGCCGCGAGCCAGGGAACGCGCGGGGGCGGGCGCGCGCCTCGGTGGAG
78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000529091.5
CDS GCA 72 bp GTGTTGGGCGGTGGCCGCTGTGGTCAGGGAGGCAGTTaGGAGTCGCTGGGGCCGCCGCCTGCGTCGTCGCTG +
Preference number: 6 (lower is better)
Translates to: VLGGGRCGQGGS*ESLGPPPASSL
Trigger: CAGCGACGACGCAGGCGGCGGCCCCAGCGACTCGCAACTGCCTCCCTGACCACAGCGGCCACCGCCCAACAC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271583.7
ENST00000528443.6
ENST00000606911.7
CDS CCA 72 bp CGATGGCTTCTCGGGGGTGTTGGGCGGTGGCCGCTGTaGTCAGGGAGGCAGTTGCGAGTCGCTGGGGCCGCC +
Preference number: 6 (lower is better)
Translates to: RWLLGGVGRWPL*SGRQLRVAGAA
Trigger: GGCGGCCCCAGCGACTCGCAACTGCCTCCCTGACCACAGCGGCCACCGCCCAACACCCCCGAGAAGCCATCG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000271583.7
ENST00000528443.6
ENST00000606911.7
CDS CCA 72 bp GTGGCCGCTGTGGTCAGGGAGGCAGTTGCGAGTCGCTaGGGCCGCCGCCTGCGTCGTCGCTGCTGTGTAGCA +
Preference number: 6 (lower is better)
Translates to: VAAVVREAVASR*GRRLRRRCCVA
Trigger: TGCTACACAGCAGCGACGACGCAGGCGGCGGCCCCAGCGACTCGCAACTGCCTCCCTGACCACAGCGGCCAC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271583.7
ENST00000528443.6
ENST00000606911.7
CDS CCA 72 bp CTCCTGCCGGTGGTGGCGATGGCTTCTCGGGGGTGTTaGGCGGTGGCCGCTGTGGTCAGGGAGGCAGTTGCG +
Preference number: 6 (lower is better)
Translates to: LLPVVAMASRGC*AVAAVVREAVA
Trigger: CGCAACTGCCTCCCTGACCACAGCGGCCACCGCCCAACACCCCCGAGAAGCCATCGCCACCACCGGCAGGAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000271583.7
ENST00000528443.6
ENST00000606911.7
CDS CCA 72 bp GGCGGCTCGTCCGAGAACCTCACTTCCCGCCGGCCCTaGCGCGACGGAGGAGTTCTGTACGCAGGCGCATCG +
Preference number: 6 (lower is better)
Translates to: GGSSENLTSRRP*RDGGVLYAGAS
Trigger: CGATGCGCCTGCGTACAGAACTCCTCCGTCGCGCCAGGGCCGGCGGGAAGTGAGGTTCTCGGACGAGCCGCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271583.7
ENST00000528443.6
ENST00000606911.7
CDS CAA 90 bp ACCCTAGGTTCTCCTGCCGGTGGTGGCGATGGCTTCTCGGGGGTGTaGGGCGGTGGCCGCTGTGGTCAGGGAGGCAGTTGCGAGTCGCTG +
Preference number: 6 (lower is better)
Translates to: TLGSPAGGGDGFSGV*GGGRCGQGGSCESL
Trigger: CAGCGACTCGCAACTGCCTCCCTGACCACAGCGGCCACCGCCCAACACCCCCGAGAAGCCATCGCCACCACCGGCAGGAGAACCTAGGGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000271583.7
ENST00000528443.6
ENST00000606911.7
CDS GCA 72 bp GTTGCGAGTCGCTGGGGCCGCCGCCTGCGTCGTCGCTaGTGTGTAGCAAACCTGCCTCTGGGCCCATGGTGT +
Preference number: 6 (lower is better)
Translates to: VASRWGRRLRRR*CVANLPLGPWC
Trigger: ACACCATGGGCCCAGAGGCAGGTTTGCTACACAGCAGCGACGACGCAGGCGGCGGCCCCAGCGACTCGCAAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271583.7
ENST00000528443.6
ENST00000606911.7
CDS CCA 72 bp TTTGGCCACCAGGGGCTCGAAGTCGCCGTACACTTCTaGCGGCTCGTCCGAGAACCTCACTTCCCGCCGGCC +
Preference number: 6 (lower is better)
Translates to: FGHQGLEVAVHF*RLVREPHFPPA
Trigger: GGCCGGCGGGAAGTGAGGTTCTCGGACGAGCCGCCAGAAGTGTACGGCGACTTCGAGCCCCTGGTGGCCAAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271583.7
ENST00000528443.6
ENST00000606911.7
CDS CAA 72 bp AGTTCTGTACGCAGGCGCATCGCTGCTGCCGCCATTTaGAGGGGCGAGCCGGCCCCTTCCCTCTCGGATGGG +
Preference number: 6 (lower is better)
Translates to: SSVRRRIAAAAI*RGEPAPSLSDG
Trigger: CCCATCCGAGAGGGAAGGGGCCGGCTCGCCCCTCAAAATGGCGGCAGCAGCGATGCGCCTGCGTACAGAACT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271583.7
ENST00000528443.6
ENST00000606911.7
CDS CCA 72 bp CGGGTAGTCCTTCGCGTCTTCATTTCCTCGGTTTCCTaGGGTCGCGGCTGCCTCCGCTGCCTAGACCGAAGG +
Preference number: 6 (lower is better)
Translates to: RVVLRVFISSVS*GRGCLRCLDRR
Trigger: CCTTCGGTCTAGGCAGCGGAGGCAGCCGCGACCCCAGGAAACCGAGGAAATGAAGACGCGAAGGACTACCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271583.7
ENST00000435319.8
ENST00000528443.6
ENST00000531630.6
ENST00000606911.7
CDS CAA 90 bp CGTCGCTGCTGTGTAGCAAACCTGCCTCTGGGCCCATGGTGTGTCTaGAGGGCTGTGAGAGAGGCAGTGCCTGAGCTGGGTCAGCTGCTG +
Preference number: 6 (lower is better)
Translates to: RRCCVANLPLGPWCV*RAVREAVPELGQLL
Trigger: CAGCAGCTGACCCAGCTCAGGCACTGCCTCTCTCACAGCCCTCAAGACACACCATGGGCCCAGAGGCAGGTTTGCTACACAGCAGCGACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528443.6
CDS CCA 72 bp GAAGATGGCTTTATGGACCCTAGGTTCTCCTGCCGGTaGTGGCGATGGCTTCTCGGGGGTGTTGGGCGGTGG +
Preference number: 6 (lower is better)
Translates to: EDGFMDPRFSCR*WRWLLGGVGRW
Trigger: CCACCGCCCAACACCCCCGAGAAGCCATCGCCACCACCGGCAGGAGAACCTAGGGTCCATAAAGCCATCTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000271583.7
ENST00000528443.6
ENST00000606911.7
CDS TCA 72 bp GACGGCTGTAGCGGAGGCTGCTCTGAGTGCTGCTGCTaGAGGCGGGTAGTCCTTCGCGTCTTCATTTCCTCG +
Preference number: 6 (lower is better)
Translates to: DGCSGGCSECCC*RRVVLRVFISS
Trigger: CGAGGAAATGAAGACGCGAAGGACTACCCGCCTTCAGCAGCAGCACTCAGAGCAGCCTCCGCTACAGCCGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271583.7
ENST00000435319.8
ENST00000528443.6
ENST00000531630.6
ENST00000606911.7
CDS GCA 72 bp GATCGCGAAGATGGCTTTATGGACCCTAGGTTCTCCTaGCGGTGGTGGCGATGGCTTCTCGGGGGTGTTGGG +
Preference number: 6 (lower is better)
Translates to: DREDGFMDPRFS*RWWRWLLGGVG
Trigger: CCCAACACCCCCGAGAAGCCATCGCCACCACCGGCAGGAGAACCTAGGGTCCATAAAGCCATCTTCGCGATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000271583.7
ENST00000528443.6
ENST00000606911.7
CDS CAA 72 bp GGAGGGGTGGGGGCGATAGAAGGATGGCAGGGCAACTaGCCTGTCCTAAGTCTAGCCGCTCGTGGCAAGTGT +
Preference number: 6 (lower is better)
Translates to: GGVGAIEGWQGN*PVLSLAARGKC
Trigger: ACACTTGCCACGAGCGGCTAGACTTAGGACAGGCAAGTTGCCCTGCCATCCTTCTATCGCCCCCACCCCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528443.6
CDS CCA 72 bp GAGGTTACAGTGACGGCCACCAAAGTGGCAGATTTTTaGCAGGGACCACCACACCAGGCGGGCATGAGCTCC +
Preference number: 6 (lower is better)
Translates to: EVTVTATKVADF*QGPPHQAGMSS
Trigger: GGAGCTCATGCCCGCCTGGTGTGGTGGTCCCTGCCAAAAATCTGCCACTTTGGTGGCCGTCACTGTAACCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000529091.5
CDS CCA 72 bp GCAGGGCAACTTGCCTGTCCTAAGTCTAGCCGCTCGTaGCAAGTGTTGACTGCGTGTAGGAGACTCCCGTCC +
Preference number: 6 (lower is better)
Translates to: AGQLACPKSSRS*QVLTACRRLPS
Trigger: GGACGGGAGTCTCCTACACGCAGTCAACACTTGCCACGAGCGGCTAGACTTAGGACAGGCAAGTTGCCCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528443.6
CDS TCA 72 bp GCTTCATCCTCTCCGCGGTCCTCACCTTCAGAGGAATaGGAGTCCCGCAGCCCTCTCCTGGTCATAACAGGA +
Preference number: 6 (lower is better)
Translates to: ASSSPRSSPSEE*ESRSPLLVITG
Trigger: TCCTGTTATGACCAGGAGAGGGCTGCGGGACTCTCATTCCTCTGAAGGTGAGGACCGCGGAGAGGATGAAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527391.5
CDS CAA 90 bp GCAGGGCAACTTGCCTGTCCTAAGTCTAGCCGCTCGTGGCAAGTGTaGACTGCGTGTAGGAGACTCCCGTCCTATCTCCCAGTACCAAGT +
Preference number: 6 (lower is better)
Translates to: AGQLACPKSSRSWQV*TACRRLPSYLPVPS
Trigger: ACTTGGTACTGGGAGATAGGACGGGAGTCTCCTACACGCAGTCAACACTTGCCACGAGCGGCTAGACTTAGGACAGGCAAGTTGCCCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528443.6
CDS TCA 72 bp TTGCCTGTCCTAAGTCTAGCCGCTCGTGGCAAGTGTTaGCTGCGTGTAGGAGACTCCCGTCCTATCTCCCAG +
Preference number: 6 (lower is better)
Translates to: LPVLSLAARGKC*LRVGDSRPISQ
Trigger: CTGGGAGATAGGACGGGAGTCTCCTACACGCAGTCAACACTTGCCACGAGCGGCTAGACTTAGGACAGGCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528443.6
CDS CAA 72 bp CTTGCCTGTCCTAAGTCTAGCCGCTCGTGGCAAGTGTaGACTGCGTGTAGGAGACTCCCGTCCTATCTCCCA +
Preference number: 6 (lower is better)
Translates to: LACPKSSRSWQV*TACRRLPSYLP
Trigger: TGGGAGATAGGACGGGAGTCTCCTACACGCAGTCAACACTTGCCACGAGCGGCTAGACTTAGGACAGGCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528443.6
CDS TCA 72 bp GCATCTCGGGCAGCAGTGAGCAGTAAGATAGCAGGCTaGGACCGAGGATGGGAGCTATTAAGATGTTTTTCC +
Preference number: 6 (lower is better)
Translates to: ASRAAVSSKIAG*DRGWELLRCFS
Trigger: GGAAAAACATCTTAATAGCTCCCATCCTCGGTCTCAGCCTGCTATCTTACTGCTCACTGCTGCCCGAGATGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000271583.7
ENST00000435319.8
ENST00000447964.1
ENST00000528443.6
ENST00000606911.7
CDS CAA 90 bp CCGGATGGCACGGACACTACGAAAAGAAGAATAGGCATCAGCAATTaGTTCACTCAGACACCTAAGTGCTTCTTCAGCATCTCGGGCAGC +
Preference number: 6 (lower is better)
Translates to: PDGTDTTKRRIGISN*FTQTPKCFFSISGS
Trigger: GCTGCCCGAGATGCTGAAGAAGCACTTAGGTGTCTGAGTGAACAAATTGCTGATGCCTATTCTTCTTTTCGTAGTGTCCGTGCCATCCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000271583.7
ENST00000435319.8
ENST00000447964.1
ENST00000528443.6
ENST00000606911.7
CDS GCA 72 bp AGGAGGCTTCCTCACTTGTCTGCTTTTGTTCACCACTaGACCCTCAAATCAAAGCATGGAGACTGGCCCAAA +
Preference number: 6 (lower is better)
Translates to: RRLPHLSAFVHH*TLKSKHGDWPK
Trigger: TTTGGGCCAGTCTCCATGCTTTGATTTGAGGGTGCAGTGGTGAACAAAAGCAGACAAGTGAGGAAGCCTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527867.5
CDS CAA 72 bp CCTTCTTTGGTAGGAGGCTTCCTCACTTGTCTGCTTTaGTTCACCACTGCACCCTCAAATCAAAGCATGGAG +
Preference number: 6 (lower is better)
Translates to: PSLVGGFLTCLL*FTTAPSNQSME
Trigger: CTCCATGCTTTGATTTGAGGGTGCAGTGGTGAACAAAAGCAGACAAGTGAGGAAGCCTCCTACCAAAGAAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527867.5
CDS TCA 72 bp CATATCTTGGGTATCTTAGAGGGGGTCGACGTAACCTaGTTACAAGATCTTCACTCACTGCTGGAGCCTCTT +
Preference number: 6 (lower is better)
Translates to: HILGILEGVDVT*LQDLHSLLEPL
Trigger: AAGAGGCTCCAGCAGTGAGTGAAGATCTTGTAATCAGGTTACGTCGACCCCCTCTAAGATACCCAAGATATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000271583.7
ENST00000528443.6
ENST00000531726.5
CDS TCA 72 bp TTCAGGGCATTTTCAGGTTGCACAGGCAGAACTAAGTaGGAAATACGGCTCCAGAGGCCATTCAGTTTGTCT +
Preference number: 6 (lower is better)
Translates to: FRAFSGCTGRTK*EIRLQRPFSLS
Trigger: AGACAAACTGAATGGCCTCTGGAGCCGTATTTCTCACTTAGTTCTGCCTGTGCAACCTGAAAATGCCCTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271583.7
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS CCA 72 bp GTGAGAAATACGGCTCCAGAGGCCATTCAGTTTGTCTaGGTCCATATGATTGTAGGAGTTGGGTGTGTTAGA +
Preference number: 6 (lower is better)
Translates to: VRNTAPEAIQFV*VHMIVGVGCVR
Trigger: TCTAACACACCCAACTCCTACAATCATATGGACCCAGACAAACTGAATGGCCTCTGGAGCCGTATTTCTCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271583.7
ENST00000435319.8
ENST00000528443.6
ENST00000606911.7
CDS CCA 72 bp TGTCCAGTCACTTGTCGGCTGGAGGTTGATGGTGACTaGTTTCCAAGCTCTGATTTCAGAATGCTGTCATTT +
Preference number: 6 (lower is better)
Translates to: CPVTCRLEVDGD*FPSSDFRMLSF
Trigger: AAATGACAGCATTCTGAAATCAGAGCTTGGAAACCAGTCACCATCAACCTCCAGCCGACAAGTGACTGGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000435319.8
ENST00000474875.5
ENST00000528443.6
ENST00000606911.7
CDS CAA 72 bp TCTTCACTCACCTTCTTTGGTAGGAGGCTTCCTCACTaGTCTGCTTTTGTTCACCACTGCACCCTCAAATCA +
Preference number: 6 (lower is better)
Translates to: SSLTFFGRRLPH*SAFVHHCTLKS
Trigger: TGATTTGAGGGTGCAGTGGTGAACAAAAGCAGACAAGTGAGGAAGCCTCCTACCAAAGAAGGTGAGTGAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527867.5
CDS TCA 72 bp TCAGGTTACTTTGTCAGTCTGATTTGCCAGACTACTTaGGGTTACAGTGACGGCCACCAAAGTGGCAGATTT +
Preference number: 6 (lower is better)
Translates to: SGYFVSLICQTT*GYSDGHQSGRF
Trigger: AAATCTGCCACTTTGGTGGCCGTCACTGTAACCTCAAGTAGTCTGGCAAATCAGACTGACAAAGTAACCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529091.5
CDS CAA 90 bp ATTACAAGATCTTCACTCACCTTCTTTGGTAGGAGGCTTCCTCACTaGTCTGCTTTTGTTCACCACTGCACCCTCAAATCAAAGCATGGA +
Preference number: 6 (lower is better)
Translates to: ITRSSLTFFGRRLPH*SAFVHHCTLKSKHG
Trigger: TCCATGCTTTGATTTGAGGGTGCAGTGGTGAACAAAAGCAGACAAGTGAGGAAGCCTCCTACCAAAGAAGGTGAGTGAAGATCTTGTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527867.5
CDS TCA 72 bp GATCTTCACTCACTGCTGGAGCCTCTTGTATGCTCCTaGCAGTTTTCTTTGAGATCGTTTGGCTTAAATCAG +
Preference number: 6 (lower is better)
Translates to: DLHSLLEPLVCS*QFSLRSFGLNQ
Trigger: CTGATTTAAGCCAAACGATCTCAAAGAAAACTGTCAGGAGCATACAAGAGGCTCCAGCAGTGAGTGAAGATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271583.7
ENST00000528443.6
ENST00000531726.5
CDS TCA 72 bp CATATCTTGGGTATCTTAGAGGGGGTCGACGTAACCTaGTTACAAGATCTTCACTCACCTTCTTTGGTAGGA +
Preference number: 6 (lower is better)
Translates to: HILGILEGVDVT*LQDLHSPSLVG
Trigger: TCCTACCAAAGAAGGTGAGTGAAGATCTTGTAATCAGGTTACGTCGACCCCCTCTAAGATACCCAAGATATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527867.5
CDS CAA 72 bp GGCCTTAACAGTAGTGACACTGCTGTGAGAGCTGTCTaGATCATCTTCTTCAGTTTCTCCATATCTTGGGTA +
Preference number: 6 (lower is better)
Translates to: GLNSSDTAVRAV*IIFFSFSISWV
Trigger: TACCCAAGATATGGAGAAACTGAAGAAGATGATCAAGACAGCTCTCACAGCAGTGTCACTACTGTTAAGGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531630.6
CDS CCA 72 bp ACAGTTTTCTTTGAGATCGTTTGGCTTAAATCAGTTTaGGAAGATGCTTCATCCTCTTCACGAGTCAGCAGG +
Preference number: 6 (lower is better)
Translates to: TVFFEIVWLKSV*EDASSSSRVSR
Trigger: CCTGCTGACTCGTGAAGAGGATGAAGCATCTTCCCAAACTGATTTAAGCCAAACGATCTCAAAGAAAACTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000474875.5
ENST00000524653.1
ENST00000527867.5
ENST00000531726.5
CDS GCA 72 bp CCTCAAATCAAAGCATGGAGACTGGCCCAAAGTAGGTaGTCAATAATTATCTGGAGAATGAATGCTCTAACT +
Preference number: 6 (lower is better)
Translates to: PQIKAWRLAQSR*SIIIWRMNALT
Trigger: AGTTAGAGCATTCATTCTCCAGATAATTATTGAGCACCTACTTTGGGCCAGTCTCCATGCTTTGATTTGAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527867.5
CDS CAA 90 bp TTCCAGGAATGTTTGGCTCCTTTTCCACAGCTTCTCATCTTGACCTaGGTACTTATTCTTAAGTTGATTCATCTGGTTCTGGAACTCTTG +
Preference number: 6 (lower is better)
Translates to: FQECLAPFPQLLILT*VLILKLIHLVLELL
Trigger: CAAGAGTTCCAGAACCAGATGAATCAACTTAAGAATAAGTACCAAGGTCAAGATGAGAAGCTGTGGAAAAGGAGCCAAACATTCCTGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000271583.7
ENST00000435319.8
ENST00000447964.1
ENST00000474875.5
ENST00000528443.6
ENST00000606911.7
CDS CAA 72 bp CTGTCATCATCTGAAAAACTGCCATATATTGAACTCTaGCCTGGTGAAGATGTTTGCATCCTGGTCCTTATT +
Preference number: 6 (lower is better)
Translates to: LSSSEKLPYIEL*PGEDVCILVLI
Trigger: AATAAGGACCAGGATGCAAACATCTTCACCAGGCAAGAGTTCAATATATGGCAGTTTTTCAGATGATGACAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000271583.7
CDS CAA 90 bp ACCTTGGTACTTATTCTTAAGTTGATTCATCTGGTTCTGGAACTCTaGAACAGCAGTGGTTTCTACCTCAGGAGTACTAAAGAACCAAAA +
Preference number: 6 (lower is better)
Translates to: TLVLILKLIHLVLEL*NSSGFYLRSTKEPK
Trigger: TTTTGGTTCTTTAGTACTCCTGAGGTAGAAACCACTGCTGTTCAAGAGTTCCAGAACCAGATGAATCAACTTAAGAATAAGTACCAAGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000271583.7
ENST00000435319.8
ENST00000447964.1
ENST00000474875.5
ENST00000528443.6
ENST00000606911.7