Pregenerated sensors for TOPORS (Homo sapiens)
Ensembl gene IDs: ENSG00000197579Ensembl transcript IDs: ENST00000360538.7, ENST00000379858.1
Found 57 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | AGTGGTAAGTCCCGGGGATCGCGGGCCCCCACCGTGTCGACTCACTaGGCCCGCAGGCGGAAAGGCCCTATTTCTTCAGCACCCAGAAAC | + |
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Preference number: 5 (lower is better) Translates to: SGKSRGSRAPTVSTH*ARRRKGPISSAPRN Trigger: GTTTCTGGGTGCTGAAGAAATAGGGCCTTTCCGCCTGCGGGCCCAGTGAGTCGACACGGTGGGGGCCCGCGATCCCCGGGACTTACCACT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000360538.7 |
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| CDS CCA 90 bp | GCTGATGCCATTATCATGAAGCCAGTAAGTCGTCGCACGCTGGACTaGATTTATTCAGTGGTAAGTCCCGGGGATCGCGGGCCCCCACCG | + |
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Preference number: 5 (lower is better) Translates to: ADAIIMKPVSRRTLD*IYSVVSPGDRGPPP Trigger: CGGTGGGGGCCCGCGATCCCCGGGACTTACCACTGAATAAATCCAGTCCAGCGTGCGACGACTTACTGGCTTCATGATAATGGCATCAGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000379858.1 |
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| CDS TCA 90 bp | ACTATCCGGTGGAGTTGTTGTTCTTCTGTTCACAGGACCACTAGGTaGATACACAGAAGCATTTCGTTCCCTTGTCAGAGTTGTACGGTA | + |
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Preference number: 5 (lower is better) Translates to: TIRWSCCSSVHRTTR*IHRSISFPCQSCTV Trigger: TACCGTACAACTCTGACAAGGGAACGAAATGCTTCTGTGTATTCACCTAGTGGTCCTGTGAACAGAAGAACAACAACTCCACCGGATAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000360538.7 ENST00000379858.1 |
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| CDS TCA 90 bp | ATTAATGATGTCCGTGGCGATGGCAATTGCCTTGATGGCTCAGTTTaGAGAGACACAATGTTACTGGGCTGGTTCTCCAAATCAGAAACA | + |
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Preference number: 5 (lower is better) Translates to: INDVRGDGNCLDGSV*RDTMLLGWFSKSET Trigger: TGTTTCTGATTTGGAGAACCAGCCCAGTAACATTGTGTCTCTTCAAACTGAGCCATCAAGGCAATTGCCATCGCCACGGACATCATTAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000360538.7 ENST00000379858.1 |
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| CDS GCA 90 bp | TCCGTGATCTTCTTTTACCATGATCACTGCTACGAGACCTTGATCTaGTTGTGCTTTCACTACTTAGAGACAGAGTTTGGCTTCTTCTGG | + |
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Preference number: 5 (lower is better) Translates to: SVIFFYHDHCYETLI*LCFHYLETEFGFFW Trigger: CCAGAAGAAGCCAAACTCTGTCTCTAAGTAGTGAAAGCACAAGCAGATCAAGGTCTCGTAGCAGTGATCATGGTAAAAGAAGATCACGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000360538.7 ENST00000379858.1 |
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| CDS GCA 90 bp | GAGACACAATGTTACTGGGCTGGTTCTCCAAATCAGAAACAAAGGTaGTCTCTTCTCTTACATCGAGAGTTTGTTCAACTGAAGCTGCCA | + |
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Preference number: 5 (lower is better) Translates to: ETQCYWAGSPNQKQR*SLLLHREFVQLKLP Trigger: TGGCAGCTTCAGTTGAACAAACTCTCGATGTAAGAGAAGAGAGCACCTTTGTTTCTGATTTGGAGAACCAGCCCAGTAACATTGTGTCTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000360538.7 ENST00000379858.1 |
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| CDS TCA 90 bp | TCATCTGCCGTAGTTGGCCTCCTTACTGCAATCTGTCTCATAAACTaGGGAATTTCAACATCTCTAGGTCTTGTTGAAATGCCTAACCCT | + |
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Preference number: 5 (lower is better) Translates to: SSAVVGLLTAICLIN*GISTSLGLVEMPNP Trigger: AGGGTTAGGCATTTCAACAAGACCTAGAGATGTTGAAATTCCTCAGTTTATGAGACAGATTGCAGTAAGGAGGCCAACTACGGCAGATGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000360538.7 ENST00000379858.1 |
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| CDS CCA 90 bp | ATGGCAATTGCCTTGATGGCTCAGTTTGAAGAGACACAATGTTACTaGGCTGGTTCTCCAAATCAGAAACAAAGGTGCTCTCTTCTCTTA | + |
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Preference number: 5 (lower is better) Translates to: MAIALMAQFEETQCY*AGSPNQKQRCSLLL Trigger: TAAGAGAAGAGAGCACCTTTGTTTCTGATTTGGAGAACCAGCCCAGTAACATTGTGTCTCTTCAAACTGAGCCATCAAGGCAATTGCCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000360538.7 ENST00000379858.1 |
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| CDS TCA 90 bp | CTGTCTAGAATAATGAGCTCTGGACAGAGTCCTCCTCCTGTAAGATaGTTCGTACCCATCCCTGTCCTTGTTTCTACTGTAATAAGTATA | + |
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Preference number: 5 (lower is better) Translates to: LSRIMSSGQSPPPVR*FVPIPVLVSTVISI Trigger: TATACTTATTACAGTAGAAACAAGGACAGGGATGGGTACGAATCATCTTACAGGAGGAGGACTCTGTCCAGAGCTCATTATTCTAGACAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000360538.7 ENST00000379858.1 |
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| CDS GCA 90 bp | AACGATCTCTATTTCTGCTCCGTGATCTTCTTTTACCATGATCACTaGTACGAGACCTTGATCTGCTTGTGCTTTCACTACTTAGAGACA | + |
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Preference number: 5 (lower is better) Translates to: NDLYFCSVIFFYHDH*YETLICLCFHYLET Trigger: TGTCTCTAAGTAGTGAAAGCACAAGCAGATCAAGGTCTCGTAGCAGTGATCATGGTAAAAGAAGATCACGGAGCAGAAATAGAGATCGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000360538.7 ENST00000379858.1 |
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| CDS CCA 90 bp | TTTTTGGTAATGACTGTCCTTTGCTTTAGAAGCAAATTCACGAGATaGCTGAGCCACTTCGTTAGTACCCTCCAAATGCCGTGTTTTGTA | + |
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Preference number: 5 (lower is better) Translates to: FLVMTVLCFRSKFTR*LSHFVSTLQMPCFV Trigger: TACAAAACACGGCATTTGGAGGGTACTAACGAAGTGGCTCAGCCATCTCGTGAATTTGCTTCTAAAGCAAAGGACAGTCATTACCAAAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000360538.7 ENST00000379858.1 |
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| CDS GCA 90 bp | ATAGGACACTTAGAATCAGGAGATGCATCAGCTGGTACTGTCTGTTaGAATTTGCTAGTGCCAGCTTTAGGTGAAAAGTTGTCCATTTTA | + |
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Preference number: 5 (lower is better) Translates to: IGHLESGDASAGTVC*NLLVPALGEKLSIL Trigger: TAAAATGGACAACTTTTCACCTAAAGCTGGCACTAGCAAATTGCAACAGACAGTACCAGCTGATGCATCTCCTGATTCTAAGTGTCCTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000360538.7 ENST00000379858.1 |
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| CDS GCA 90 bp | AATTTTCCGCAAAGATCTTTCATCTGCCGTAGTTGGCCTCCTTACTaGAATCTGTCTCATAAACTGAGGAATTTCAACATCTCTAGGTCT | + |
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Preference number: 5 (lower is better) Translates to: NFPQRSFICRSWPPY*NLSHKLRNFNISRS Trigger: AGACCTAGAGATGTTGAAATTCCTCAGTTTATGAGACAGATTGCAGTAAGGAGGCCAACTACGGCAGATGAAAGATCTTTGCGGAAAATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000360538.7 ENST00000379858.1 |
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| CDS TCA 90 bp | ATCCTTATCACTGTCACTGTCAATGGTAATTACAACTGGGGAACGTaGAGCATTATCTCCATGGTGTTTCTTATGCTTCTTCTTATGTTT | + |
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Preference number: 5 (lower is better) Translates to: ILITVTVNGNYNWGT*SIISMVFLMLLLMF Trigger: AAACATAAGAAGAAGCATAAGAAACACCATGGAGATAATGCTTCACGTTCCCCAGTTGTAATTACCATTGACAGTGACAGTGATAAGGAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000360538.7 ENST00000379858.1 |
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| CDS CCA 72 bp | CTGATGCCATTATCTCGGAGGATGCCGGCGCAGGCCTaGCTGGGGCGCTCGCCGCGAGCTCCCGGCAGCCCA | + |
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Preference number: 6 (lower is better) Translates to: LMPLSRRMPAQA*LGRSPRAPGSP Trigger: TGGGCTGCCGGGAGCTCGCGGCGAGCGCCCCAGCCAGGCCTGCGCCGGCATCCTCCGAGATAATGGCATCAG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000360538.7 |
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| CDS CCA 72 bp | TGCCATTATCTCGGAGGATGCCGGCGCAGGCCTGGCTaGGGCGCTCGCCGCGAGCTCCCGGCAGCCCAGAAA | + |
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Preference number: 6 (lower is better) Translates to: CHYLGGCRRRPG*GARRELPAAQK Trigger: TTTCTGGGCTGCCGGGAGCTCGCGGCGAGCGCCCCAGCCAGGCCTGCGCCGGCATCCTCCGAGATAATGGCA 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000360538.7 |
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| CDS CCA 72 bp | TCCCGGGGATCGCGGGCCCCCACCGTGTCGACTCACTaGGCCCGCAGGCGGAAAGGCCCTATTTCTTCAGCA | + |
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Preference number: 6 (lower is better) Translates to: SRGSRAPTVSTH*ARRRKGPISSA Trigger: TGCTGAAGAAATAGGGCCTTTCCGCCTGCGGGCCCAGTGAGTCGACACGGTGGGGGCCCGCGATCCCCGGGA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000360538.7 |
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| CDS CCA 72 bp | GACCCCATGAAGCCAGTAAGTCGTCGCACGCTGGACTaGATTTATTCAGTGGTAAGTCCCGGGGATCGCGGG | + |
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Preference number: 6 (lower is better) Translates to: DPMKPVSRRTLD*IYSVVSPGDRG Trigger: CCCGCGATCCCCGGGACTTACCACTGAATAAATCCAGTCCAGCGTGCGACGACTTACTGGCTTCATGGGGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000360538.7 |
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| CDS CCA 72 bp | ATTATCATGAAGCCAGTAAGTCGTCGCACGCTGGACTaGATTTATTCAGTGGTAAGTCCCGGGGATCGCGGG | + |
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Preference number: 6 (lower is better) Translates to: IIMKPVSRRTLD*IYSVVSPGDRG Trigger: CCCGCGATCCCCGGGACTTACCACTGAATAAATCCAGTCCAGCGTGCGACGACTTACTGGCTTCATGATAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000379858.1 |
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| CDS TCA 72 bp | GTCCGTGGCGATGGCAATTGCCTTGATGGCTCAGTTTaGAGAGACACAATGTTACTGGGCTGGTTCTCCAAA | + |
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Preference number: 6 (lower is better) Translates to: VRGDGNCLDGSV*RDTMLLGWFSK Trigger: TTTGGAGAACCAGCCCAGTAACATTGTGTCTCTTCAAACTGAGCCATCAAGGCAATTGCCATCGCCACGGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000360538.7 ENST00000379858.1 |
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| CDS TCA 72 bp | CTGTCCTTTGCTTTAGAAGCAAATTCACGAGATGGCTaGGCCACTTCGTTAGTACCCTCCAAATGCCGTGTT | + |
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Preference number: 6 (lower is better) Translates to: LSFALEANSRDG*ATSLVPSKCRV Trigger: AACACGGCATTTGGAGGGTACTAACGAAGTGGCTCAGCCATCTCGTGAATTTGCTTCTAAAGCAAAGGACAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000360538.7 ENST00000379858.1 |
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| CDS CCA 72 bp | ATGACTGTCCTTTGCTTTAGAAGCAAATTCACGAGATaGCTGAGCCACTTCGTTAGTACCCTCCAAATGCCG | + |
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Preference number: 6 (lower is better) Translates to: MTVLCFRSKFTR*LSHFVSTLQMP Trigger: CGGCATTTGGAGGGTACTAACGAAGTGGCTCAGCCATCTCGTGAATTTGCTTCTAAAGCAAAGGACAGTCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000360538.7 ENST00000379858.1 |
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| CDS CAA 90 bp | CAAGACATACTGACATTAATGATGTCCGTGGCGATGGCAATTGCCTaGATGGCTCAGTTTGAAGAGACACAATGTTACTGGGCTGGTTCT | + |
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Preference number: 6 (lower is better) Translates to: QDILTLMMSVAMAIA*MAQFEETQCYWAGS Trigger: AGAACCAGCCCAGTAACATTGTGTCTCTTCAAACTGAGCCATCAAGGCAATTGCCATCGCCACGGACATCATTAATGTCAGTATGTCTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000360538.7 ENST00000379858.1 |
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| CDS TCA 72 bp | TCAGAGTTGTACGGTAGCGAAATCGTCGATCAGGGGTaGCAAAAGAACCATTATACGAAGGCCTTAGGACAT | + |
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Preference number: 6 (lower is better) Translates to: SELYGSEIVDQG*QKNHYTKALGH Trigger: ATGTCCTAAGGCCTTCGTATAATGGTTCTTTTGTCACCCCTGATCGACGATTTCGCTACCGTACAACTCTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000360538.7 ENST00000379858.1 |
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| CDS TCA 72 bp | GCTCTTGGGTCTCAGCCTCATCTGGAGATATTGTTATaGCTGAAGAATCAGAATGGCTGCCTTCTTCGTATG | + |
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Preference number: 6 (lower is better) Translates to: ALGSQPHLEILL*LKNQNGCLLRM Trigger: CATACGAAGAAGGCAGCCATTCTGATTCTTCAGTCATAACAATATCTCCAGATGAGGCTGAGACCCAAGAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000360538.7 ENST00000379858.1 |
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| CDS TCA 72 bp | ATAATGAGCTCTGGACAGAGTCCTCCTCCTGTAAGATaGTTCGTACCCATCCCTGTCCTTGTTTCTACTGTA | + |
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Preference number: 6 (lower is better) Translates to: IMSSGQSPPPVR*FVPIPVLVSTV Trigger: TACAGTAGAAACAAGGACAGGGATGGGTACGAATCATCTTACAGGAGGAGGACTCTGTCCAGAGCTCATTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000360538.7 ENST00000379858.1 |
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| CDS CAA 72 bp | CTGACATTAATGATGTCCGTGGCGATGGCAATTGCCTaGATGGCTCAGTTTGAAGAGACACAATGTTACTGG | + |
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Preference number: 6 (lower is better) Translates to: LTLMMSVAMAIA*MAQFEETQCYW Trigger: CCAGTAACATTGTGTCTCTTCAAACTGAGCCATCAAGGCAATTGCCATCGCCACGGACATCATTAATGTCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000360538.7 ENST00000379858.1 |
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| CDS CAA 90 bp | GTGATCTTCTTTTACCATGATCACTGCTACGAGACCTTGATCTGCTaGTGCTTTCACTACTTAGAGACAGAGTTTGGCTTCTTCTGGACC | + |
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Preference number: 6 (lower is better) Translates to: VIFFYHDHCYETLIC*CFHYLETEFGFFWT Trigger: GGTCCAGAAGAAGCCAAACTCTGTCTCTAAGTAGTGAAAGCACAAGCAGATCAAGGTCTCGTAGCAGTGATCATGGTAAAAGAAGATCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000360538.7 ENST00000379858.1 |
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| CDS CAA 90 bp | TTCTGCTCCGTGATCTTCTTTTACCATGATCACTGCTACGAGACCTaGATCTGCTTGTGCTTTCACTACTTAGAGACAGAGTTTGGCTTC | + |
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Preference number: 6 (lower is better) Translates to: FCSVIFFYHDHCYET*ICLCFHYLETEFGF Trigger: GAAGCCAAACTCTGTCTCTAAGTAGTGAAAGCACAAGCAGATCAAGGTCTCGTAGCAGTGATCATGGTAAAAGAAGATCACGGAGCAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000360538.7 ENST00000379858.1 |
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| CDS TCA 72 bp | CGATCTCTATTTCTGCTCCGTGATCTTCTTTTACCATaGTCACTGCTACGAGACCTTGATCTGCTTGTGCTT | + |
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Preference number: 6 (lower is better) Translates to: RSLFLLRDLLLP*SLLRDLDLLVL Trigger: AAGCACAAGCAGATCAAGGTCTCGTAGCAGTGATCATGGTAAAAGAAGATCACGGAGCAGAAATAGAGATCG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000360538.7 ENST00000379858.1 |
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| CDS GCA 72 bp | AGCAGGGCAATCATAATTGGCATGCTGGTCAAAGGCTaGCATGTTAAAAGGAGATCGGGCAAAACTGATAAA | + |
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Preference number: 6 (lower is better) Translates to: SRAIIIGMLVKG*HVKRRSGKTDK Trigger: TTTATCAGTTTTGCCCGATCTCCTTTTAACATGGCAGCCTTTGACCAGCATGCCAATTATGATTGCCCTGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000360538.7 ENST00000379858.1 |
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| CDS CCA 72 bp | GCATATAGGACACTTAGAATCAGGAGATGCATCAGCTaGTACTGTCTGTTGCAATTTGCTAGTGCCAGCTTT | + |
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Preference number: 6 (lower is better) Translates to: AYRTLRIRRCIS*YCLLQFASASF Trigger: AAAGCTGGCACTAGCAAATTGCAACAGACAGTACCAGCTGATGCATCTCCTGATTCTAAGTGTCCTATATGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000360538.7 ENST00000379858.1 |
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| CDS CAA 72 bp | TCAGGAGATGCATCAGCTGGTACTGTCTGTTGCAATTaGCTAGTGCCAGCTTTAGGTGAAAAGTTGTCCATT | + |
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Preference number: 6 (lower is better) Translates to: SGDASAGTVCCN*LVPALGEKLSI Trigger: AATGGACAACTTTTCACCTAAAGCTGGCACTAGCAAATTGCAACAGACAGTACCAGCTGATGCATCTCCTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000360538.7 ENST00000379858.1 |
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| CDS TCA 72 bp | GTGAAGGCAAGCTGGATTTCTACGGAAAAATTCAGCTaGAATATCCCTGTAGCGGCCACCATCTTCAATATT | + |
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Preference number: 6 (lower is better) Translates to: VKASWISTEKFS*NIPVAATIFNI Trigger: AATATTGAAGATGGTGGCCGCTACAGGGATATTTCAGCTGAATTTTTCCGTAGAAATCCAGCTTGCCTTCAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000360538.7 ENST00000379858.1 |
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| CDS GCA 72 bp | TATTTCTGCTCCGTGATCTTCTTTTACCATGATCACTaGTACGAGACCTTGATCTGCTTGTGCTTTCACTAC | + |
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Preference number: 6 (lower is better) Translates to: YFCSVIFFYHDH*YETLICLCFHY Trigger: GTAGTGAAAGCACAAGCAGATCAAGGTCTCGTAGCAGTGATCATGGTAAAAGAAGATCACGGAGCAGAAATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000360538.7 ENST00000379858.1 |
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| CDS CCA 72 bp | TTGAATTTTCCGCAAAGATCTTTCATCTGCCGTAGTTaGCCTCCTTACTGCAATCTGTCTCATAAACTGAGG | + |
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Preference number: 6 (lower is better) Translates to: LNFPQRSFICRS*PPYCNLSHKLR Trigger: CCTCAGTTTATGAGACAGATTGCAGTAAGGAGGCCAACTACGGCAGATGAAAGATCTTTGCGGAAAATTCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000360538.7 ENST00000379858.1 |
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| CDS CCA 72 bp | CTGAAGAATCATCACTGTCATTATTTAGGTCGTCATTaGTTTGTACTCCTTGTATCTGAGACGTGGCTCCTC | + |
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Preference number: 6 (lower is better) Translates to: LKNHHCHYLGRH*FVLLVSETWLL Trigger: GAGGAGCCACGTCTCAGATACAAGGAGTACAAACCAATGACGACCTAAATAATGACAGTGATGATTCTTCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000360538.7 ENST00000379858.1 |
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| CDS CCA 72 bp | GATCTGCTTGTGCTTTCACTACTTAGAGACAGAGTTTaGCTTCTTCTGGACCAACTGCTATCTCTAGTTCTT | + |
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Preference number: 6 (lower is better) Translates to: DLLVLSLLRDRV*LLLDQLLSLVL Trigger: AAGAACTAGAGATAGCAGTTGGTCCAGAAGAAGCCAAACTCTGTCTCTAAGTAGTGAAAGCACAAGCAGATC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000360538.7 ENST00000379858.1 |
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| CDS CAA 72 bp | TTTTACCATGATCACTGCTACGAGACCTTGATCTGCTaGTGCTTTCACTACTTAGAGACAGAGTTTGGCTTC | + |
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Preference number: 6 (lower is better) Translates to: FYHDHCYETLIC*CFHYLETEFGF Trigger: GAAGCCAAACTCTGTCTCTAAGTAGTGAAAGCACAAGCAGATCAAGGTCTCGTAGCAGTGATCATGGTAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000360538.7 ENST00000379858.1 |
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| CDS CAA 72 bp | GTGATCTTCTTTTACCATGATCACTGCTACGAGACCTaGATCTGCTTGTGCTTTCACTACTTAGAGACAGAG | + |
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Preference number: 6 (lower is better) Translates to: VIFFYHDHCYET*ICLCFHYLETE Trigger: CTCTGTCTCTAAGTAGTGAAAGCACAAGCAGATCAAGGTCTCGTAGCAGTGATCATGGTAAAAGAAGATCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000360538.7 ENST00000379858.1 |
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| CDS CAA 90 bp | GGTACTGTCTGTTGCAATTTGCTAGTGCCAGCTTTAGGTGAAAAGTaGTCCATTTTAAATTCCTTAGCAGCTGATGCCATTATCTCGGAG | + |
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Preference number: 6 (lower is better) Translates to: GTVCCNLLVPALGEK*SILNSLAADAIISE Trigger: CTCCGAGATAATGGCATCAGCTGCTAAGGAATTTAAAATGGACAACTTTTCACCTAAAGCTGGCACTAGCAAATTGCAACAGACAGTACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000360538.7 |
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| CDS TCA 72 bp | TTTGTACTCCTTGTATCTGAGACGTGGCTCCTCCTGTaGCAAGTTCTTCATCTGAACTGTCAGAAGTATTTA | + |
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Preference number: 6 (lower is better) Translates to: FVLLVSETWLLL*QVLHLNCQKYL Trigger: TAAATACTTCTGACAGTTCAGATGAAGAACTTGTCACAGGAGGAGCCACGTCTCAGATACAAGGAGTACAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000360538.7 ENST00000379858.1 |
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| CDS TCA 72 bp | AAGGAAGGAGCCAAAAACTCATTTTGTAGAGGGTCTTaGGGACCACTATTGTCACATTCTGTATCCTCCTTT | + |
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Preference number: 6 (lower is better) Translates to: KEGAKNSFCRGS*GPLLSHSVSSF Trigger: AAAGGAGGATACAGAATGTGACAATAGTGGTCCTCAAGACCCTCTACAAAATGAGTTTTTGGCTCCTTCCTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000360538.7 ENST00000379858.1 |
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| CDS GCA 72 bp | CAAAGATCTTTCATCTGCCGTAGTTGGCCTCCTTACTaGAATCTGTCTCATAAACTGAGGAATTTCAACATC | + |
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Preference number: 6 (lower is better) Translates to: QRSFICRSWPPY*NLSHKLRNFNI Trigger: GATGTTGAAATTCCTCAGTTTATGAGACAGATTGCAGTAAGGAGGCCAACTACGGCAGATGAAAGATCTTTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000360538.7 ENST00000379858.1 |
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| CDS CAA 90 bp | CACTTAGAATCAGGAGATGCATCAGCTGGTACTGTCTGTTGCAATTaGCTAGTGCCAGCTTTAGGTGAAAAGTTGTCCATTTTAAATTCC | + |
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Preference number: 6 (lower is better) Translates to: HLESGDASAGTVCCN*LVPALGEKLSILNS Trigger: GGAATTTAAAATGGACAACTTTTCACCTAAAGCTGGCACTAGCAAATTGCAACAGACAGTACCAGCTGATGCATCTCCTGATTCTAAGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000360538.7 ENST00000379858.1 |
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| CDS CAA 90 bp | TCTGATCATGCCCACTTCTACTCTGAGAACGTGAATCTGAACTTCTaGATCTTCCCCTCTTTCTGTGTCTATGGTTATATGGAGAATATA | + |
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Preference number: 6 (lower is better) Translates to: SDHAHFYSENVNLNF*IFPSFCVYGYMENI Trigger: TATATTCTCCATATAACCATAGACACAGAAAGAGGGGAAGATCAAGAAGTTCAGATTCACGTTCTCAGAGTAGAAGTGGGCATGATCAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000360538.7 ENST00000379858.1 |
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| CDS CAA 90 bp | GGTACTGTCTGTTGCAATTTGCTAGTGCCAGCTTTAGGTGAAAAGTaGTCCATTTTAAATTCCTTAGCAGCTGATGCCATTATCATGAAG | + |
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Preference number: 6 (lower is better) Translates to: GTVCCNLLVPALGEK*SILNSLAADAIIMK Trigger: CTTCATGATAATGGCATCAGCTGCTAAGGAATTTAAAATGGACAACTTTTCACCTAAAGCTGGCACTAGCAAATTGCAACAGACAGTACC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000379858.1 |
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| CDS TCA 72 bp | GTAGTTGGCCTCCTTACTGCAATCTGTCTCATAAACTaGGGAATTTCAACATCTCTAGGTCTTGTTGAAATG | + |
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Preference number: 6 (lower is better) Translates to: VVGLLTAICLIN*GISTSLGLVEM Trigger: CATTTCAACAAGACCTAGAGATGTTGAAATTCCTCAGTTTATGAGACAGATTGCAGTAAGGAGGCCAACTAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000360538.7 ENST00000379858.1 |
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| CDS TCA 72 bp | ACTGTCACTGTCAATGGTAATTACAACTGGGGAACGTaGAGCATTATCTCCATGGTGTTTCTTATGCTTCTT | + |
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Preference number: 6 (lower is better) Translates to: TVTVNGNYNWGT*SIISMVFLMLL Trigger: AAGAAGCATAAGAAACACCATGGAGATAATGCTTCACGTTCCCCAGTTGTAATTACCATTGACAGTGACAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000360538.7 ENST00000379858.1 |
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| CDS CAA 72 bp | AAAGAACCATTATACGAAGGCCTTAGGACATACTCCTaGAAGTCATCTTCTGCCCTCACAGAATGGAAAATA | + |
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Preference number: 6 (lower is better) Translates to: KEPLYEGLRTYS*KSSSALTEWKI Trigger: TATTTTCCATTCTGTGAGGGCAGAAGATGACTTCAAGGAGTATGTCCTAAGGCCTTCGTATAATGGTTCTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000360538.7 ENST00000379858.1 |
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| CDS CAA 90 bp | ACCAGCACGATAAAGAGTTCGTCTAAAATTAATAATATCTTGTTCTaGAATTTTCCGCAAAGATCTTTCATCTGCCGTAGTTGGCCTCCT | + |
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Preference number: 6 (lower is better) Translates to: TSTIKSSSKINNILF*NFPQRSFICRSWPP Trigger: AGGAGGCCAACTACGGCAGATGAAAGATCTTTGCGGAAAATTCAAGAACAAGATATTATTAATTTTAGACGAACTCTTTATCGTGCTGGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000360538.7 ENST00000379858.1 |
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| CDS CAA 90 bp | TCGAGCACCAGCACGATAAAGAGTTCGTCTAAAATTAATAATATCTaGTTCTTGAATTTTCCGCAAAGATCTTTCATCTGCCGTAGTTGG | + |
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Preference number: 6 (lower is better) Translates to: SSTSTIKSSSKINNI*FLNFPQRSFICRSW Trigger: CCAACTACGGCAGATGAAAGATCTTTGCGGAAAATTCAAGAACAAGATATTATTAATTTTAGACGAACTCTTTATCGTGCTGGTGCTCGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000360538.7 ENST00000379858.1 |
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| CDS CAA 90 bp | TGTTCAACTGAAGCTGCCAGAGGTGGAATATTATCTACAGTTTTGTaGGCATTATTCAAGTTGTTACTAAGTGTGGCAATATCACATTCC | + |
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Preference number: 6 (lower is better) Translates to: CSTEAARGGILSTVL*ALFKLLLSVAISHS Trigger: GGAATGTGATATTGCCACACTTAGTAACAACTTGAATAATGCCAACAAAACTGTAGATAATATTCCACCTCTGGCAGCTTCAGTTGAACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000360538.7 ENST00000379858.1 |
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| CDS CAA 72 bp | TTCAAGTTGTTACTAAGTGTGGCAATATCACATTCCTaGTCCAGCACACCAAATTCAGCTTCTATTGTAACT | + |
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Preference number: 6 (lower is better) Translates to: FKLLLSVAISHS*SSTPNSASIVT Trigger: AGTTACAATAGAAGCTGAATTTGGTGTGCTGGACAAGGAATGTGATATTGCCACACTTAGTAACAACTTGAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000360538.7 ENST00000379858.1 |
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| CDS CAA 72 bp | GAAGCTGCCAGAGGTGGAATATTATCTACAGTTTTGTaGGCATTATTCAAGTTGTTACTAAGTGTGGCAATA | + |
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Preference number: 6 (lower is better) Translates to: EAARGGILSTVL*ALFKLLLSVAI Trigger: TATTGCCACACTTAGTAACAACTTGAATAATGCCAACAAAACTGTAGATAATATTCCACCTCTGGCAGCTTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000360538.7 ENST00000379858.1 |
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| CDS CAA 90 bp | GTTTGTTCAACTGAAGCTGCCAGAGGTGGAATATTATCTACAGTTTaGTTGGCATTATTCAAGTTGTTACTAAGTGTGGCAATATCACAT | + |
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Preference number: 6 (lower is better) Translates to: VCSTEAARGGILSTV*LALFKLLLSVAISH Trigger: ATGTGATATTGCCACACTTAGTAACAACTTGAATAATGCCAACAAAACTGTAGATAATATTCCACCTCTGGCAGCTTCAGTTGAACAAAC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000360538.7 ENST00000379858.1 |
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| CDS CAA 90 bp | TTGGCATTATTCAAGTTGTTACTAAGTGTGGCAATATCACATTCCTaGTCCAGCACACCAAATTCAGCTTCTATTGTAACTACATCTTTA | + |
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Preference number: 6 (lower is better) Translates to: LALFKLLLSVAISHS*SSTPNSASIVTTSL Trigger: TAAAGATGTAGTTACAATAGAAGCTGAATTTGGTGTGCTGGACAAGGAATGTGATATTGCCACACTTAGTAACAACTTGAATAATGCCAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000360538.7 ENST00000379858.1 |
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