Pregenerated sensors for TOPAZ1 (Homo sapiens)
Ensembl gene IDs: ENSG00000173769Ensembl transcript IDs: ENST00000309765.4
Found 45 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | TGGCGCCTGCCGCTTCTGCAGGTTTCGCACATTGCCTTCAGGCCCTaGGGCCGTCGTGGGGCCCAGGGGTGGAGGTCGTCGCATGTGCCC | + |
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Preference number: 5 (lower is better) Translates to: WRLPLLQVSHIAFRP*GRRGAQGWRSSHVP Trigger: GGGCACATGCGACGACCTCCACCCCTGGGCCCCACGACGGCCTCAGGGCCTGAAGGCAATGTGCGAAACCTGCAGAAGCGGCAGGCGCCA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000309765.4 |
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| CDS TCA 90 bp | AGCAACATTGGGCTCCTGGCTTATCTTTGGGACCTCAGAAGTAAATaGGAGCTCCCCTTCATTGGAGACTCCAAAGAGGTCTGGGTCATC | + |
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Preference number: 5 (lower is better) Translates to: SNIGLLAYLWDLRSK*ELPFIGDSKEVWVI Trigger: GATGACCCAGACCTCTTTGGAGTCTCCAATGAAGGGGAGCTCTCATTTACTTCTGAGGTCCCAAAGATAAGCCAGGAGCCCAATGTTGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000309765.4 |
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| CDS TCA 90 bp | ATCAACTTGCCTACAACTTTCCTGAGACCCACGAAGAAAGTAACTTaGTTCTGGCAAGGAAGCCTTTTTCCAACACCAGGCAGATATTCT | + |
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Preference number: 5 (lower is better) Translates to: INLPTTFLRPTKKVT*FWQGSLFPTPGRYS Trigger: AGAATATCTGCCTGGTGTTGGAAAAAGGCTTCCTTGCCAGAATCAAGTTACTTTCTTCGTGGGTCTCAGGAAAGTTGTAGGCAAGTTGAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000309765.4 |
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| CDS TCA 90 bp | GGAGGTACTAATAAACACAGAGGTTTCGGGACTGGTACTGCAAATTaGCATTCGCCGACCATAAAGTCTGCATTTCTAGAATCTTTGCTT | + |
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Preference number: 5 (lower is better) Translates to: GGTNKHRGFGTGTAN*HSPTIKSAFLESLL Trigger: AAGCAAAGATTCTAGAAATGCAGACTTTATGGTCGGCGAATGTCAATTTGCAGTACCAGTCCCGAAACCTCTGTGTTTATTAGTACCTCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000309765.4 |
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| CDS TCA 90 bp | TGGCAAGGAAGCCTTTTTCCAACACCAGGCAGATATTCTAGCACATaGATAATAGGGCCAAGTTCTTTTACCAGTCATAGGTATTGTTCT | + |
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Preference number: 5 (lower is better) Translates to: WQGSLFPTPGRYSST*IIGPSSFTSHRYCS Trigger: AGAACAATACCTATGACTGGTAAAAGAACTTGGCCCTATTATTCATGTGCTAGAATATCTGCCTGGTGTTGGAAAAAGGCTTCCTTGCCA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000309765.4 |
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| CDS GCA 90 bp | AGCAATGCATGCTTTTCGATGAATAGTTTTGCCTGCAGAGTTATTTaGTTCCTGACCATCTTTGGAAGTCGCTGTCAAATTAAGTTTCGT | + |
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Preference number: 5 (lower is better) Translates to: SNACFSMNSFACRVI*FLTIFGSRCQIKFR Trigger: ACGAAACTTAATTTGACAGCGACTTCCAAAGATGGTCAGGAAGCAAATAACTCTGCAGGCAAAACTATTCATCGAAAAGCATGCATTGCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000309765.4 |
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| CDS GCA 90 bp | AAATGTTTGTTGAGCAATGCATGCTTTTCGATGAATAGTTTTGCCTaGAGAGTTATTTGCTTCCTGACCATCTTTGGAAGTCGCTGTCAA | + |
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Preference number: 5 (lower is better) Translates to: KCLLSNACFSMNSFA*RVICFLTIFGSRCQ Trigger: TTGACAGCGACTTCCAAAGATGGTCAGGAAGCAAATAACTCTGCAGGCAAAACTATTCATCGAAAAGCATGCATTGCTCAACAAACATTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000309765.4 |
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| CDS TCA 90 bp | GAAGCAACTTCTTTATTAGAAACAATATTGCCTGGTTCAGAGACGTaGTTAGATGGTTTGCTATTGTTACCTTGCTTTGTAAAGCTTGGA | + |
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Preference number: 5 (lower is better) Translates to: EATSLLETILPGSET*LDGLLLLPCFVKLG Trigger: TCCAAGCTTTACAAAGCAAGGTAACAATAGCAAACCATCTAATCACGTCTCTGAACCAGGCAATATTGTTTCTAATAAAGAAGTTGCTTC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000309765.4 |
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| CDS TCA 90 bp | AGAAATCTGAAATCATTCATCCAGGTATTCAGTATTGTGTCTTCTTaGCGACCACTTAGATTCAAAGGAGGTACTAATAAACACAGAGGT | + |
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Preference number: 5 (lower is better) Translates to: RNLKSFIQVFSIVSS*RPLRFKGGTNKHRG Trigger: ACCTCTGTGTTTATTAGTACCTCCTTTGAATCTAAGTGGTCGTCAAGAAGACACAATACTGAATACCTGGATGAATGATTTCAGATTTCT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000309765.4 |
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| CDS TCA 90 bp | CTTTTCAAAACTATCTGCAGTATCTGTGTAGAAGTTCCAGGACTCTaGATACTACTAGCATTAGATACCATGAAGATTTCAATAGCTAAG | + |
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Preference number: 5 (lower is better) Translates to: LFKTICSICVEVPGL*ILLALDTMKISIAK Trigger: CTTAGCTATTGAAATCTTCATGGTATCTAATGCTAGTAGTATTCAGAGTCCTGGAACTTCTACACAGATACTGCAGATAGTTTTGAAAAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000309765.4 |
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| CDS GCA 72 bp | GCGGGTCTGACGAGTCTGACGGGCTCACCGGGCCCCTaGGCCCCTCCACCTGACGCCTTGCGGCCTTTCCAG | + |
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Preference number: 6 (lower is better) Translates to: AGLTSLTGSPGP*APPPDALRPFQ Trigger: CTGGAAAGGCCGCAAGGCGTCAGGTGGAGGGGCGCAGGGGCCCGGTGAGCCCGTCAGACTCGTCAGACCCGC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000309765.4 |
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| CDS GCA 72 bp | GGCCCCTCTGCACCAGCTCGCAGGAACCCACCGCGGTaGAAACGCTGCTCCCGCCTGGAGGTACCTACTGCC | + |
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Preference number: 6 (lower is better) Translates to: GPSAPARRNPPR*KRCSRLEVPTA Trigger: GGCAGTAGGTACCTCCAGGCGGGAGCAGCGTTTGCACCGCGGTGGGTTCCTGCGAGCTGGTGCAGAGGGGCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000309765.4 |
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| CDS GCA 72 bp | GCGGTGCAAACGCTGCTCCCGCCTGGAGGTACCTACTaGCCTCTGACCCACCCCACACCGCCAGTCACCACA | + |
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Preference number: 6 (lower is better) Translates to: AVQTLLPPGGTY*PLTHPTPPVTT Trigger: TGTGGTGACTGGCGGTGTGGGGTGGGTCAGAGGGCAGTAGGTACCTCCAGGCGGGAGCAGCGTTTGCACCGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000309765.4 |
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| CDS CAA 90 bp | TTTCCTTGGTGTGTCTTTCCGTTTGCAAGGGGAGTTCAGCCTCCTTaGCTGCTTCTAGGCCTCGCGGGTCTGACGAGTCTGACGGGCTCA | + |
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Preference number: 6 (lower is better) Translates to: FPWCVFPFARGVQPP*LLLGLAGLTSLTGS Trigger: TGAGCCCGTCAGACTCGTCAGACCCGCGAGGCCTAGAAGCAGCAAAGGAGGCTGAACTCCCCTTGCAAACGGAAAGACACACCAAGGAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000309765.4 |
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| CDS CAA 72 bp | TGTGTCTTTCCGTTTGCAAGGGGAGTTCAGCCTCCTTaGCTGCTTCTAGGCCTCGCGGGTCTGACGAGTCTG | + |
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Preference number: 6 (lower is better) Translates to: CVFPFARGVQPP*LLLGLAGLTSL Trigger: CAGACTCGTCAGACCCGCGAGGCCTAGAAGCAGCAAAGGAGGCTGAACTCCCCTTGCAAACGGAAAGACACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000309765.4 |
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| CDS CCA 72 bp | CCGACTTATCACTTTCCACCTCGCCTCTCCCAGGGGTaGCCCGGGCCACCATTCTCCTCTTTTGCTTATTTT | + |
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Preference number: 6 (lower is better) Translates to: PTYHFPPRLSQG*PGPPFSSFAYF Trigger: AAAATAAGCAAAAGAGGAGAATGGTGGCCCGGGCCACCCCTGGGAGAGGCGAGGTGGAAAGTGATAAGTCGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000309765.4 |
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| CDS TCA 72 bp | GCACATCCAGTCTATCACAAGGCCACAGAGGCGTATTaGTTATCCACTCTGACTCCCTCATTACCCAAATGG | + |
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Preference number: 6 (lower is better) Translates to: AHPVYHKATEAY*LSTLTPSLPKW Trigger: CCATTTGGGTAATGAGGGAGTCAGAGTGGATAATCAATACGCCTCTGTGGCCTTGTGATAGACTGGATGTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000309765.4 |
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| CDS CAA 72 bp | TACTTGGAGTCTGTTGATTGGTGCTCTCCAGCAACATaGGGCTCCTGGCTTATCTTTGGGACCTCAGAAGTA | + |
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Preference number: 6 (lower is better) Translates to: YLESVDWCSPAT*GSWLIFGTSEV Trigger: TACTTCTGAGGTCCCAAAGATAAGCCAGGAGCCCAATGTTGCTGGAGAGCACCAATCAACAGACTCCAAGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000309765.4 |
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| CDS CAA 90 bp | GTTTCCATGTACTTGGAGTCTGTTGATTGGTGCTCTCCAGCAACATaGGGCTCCTGGCTTATCTTTGGGACCTCAGAAGTAAATGAGAGC | + |
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Preference number: 6 (lower is better) Translates to: VSMYLESVDWCSPAT*GSWLIFGTSEVNES Trigger: GCTCTCATTTACTTCTGAGGTCCCAAAGATAAGCCAGGAGCCCAATGTTGCTGGAGAGCACCAATCAACAGACTCCAAGTACATGGAAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000309765.4 |
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| CDS TCA 72 bp | CCTACAACTTTCCTGAGACCCACGAAGAAAGTAACTTaGTTCTGGCAAGGAAGCCTTTTTCCAACACCAGGC | + |
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Preference number: 6 (lower is better) Translates to: PTTFLRPTKKVT*FWQGSLFPTPG Trigger: GCCTGGTGTTGGAAAAAGGCTTCCTTGCCAGAATCAAGTTACTTTCTTCGTGGGTCTCAGGAAAGTTGTAGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000309765.4 |
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| CDS GCA 72 bp | ACTGGAGTTTCCATGTACTTGGAGTCTGTTGATTGGTaGTCTCCAGCAACATTGGGCTCCTGGCTTATCTTT | + |
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Preference number: 6 (lower is better) Translates to: TGVSMYLESVDW*SPATLGSWLIF Trigger: AAAGATAAGCCAGGAGCCCAATGTTGCTGGAGAGCACCAATCAACAGACTCCAAGTACATGGAAACTCCAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000309765.4 |
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| CDS CCA 72 bp | TTTACTGGAGTTTCCATGTACTTGGAGTCTGTTGATTaGTGCTCTCCAGCAACATTGGGCTCCTGGCTTATC | + |
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Preference number: 6 (lower is better) Translates to: FTGVSMYLESVD*CSPATLGSWLI Trigger: GATAAGCCAGGAGCCCAATGTTGCTGGAGAGCACCAATCAACAGACTCCAAGTACATGGAAACTCCAGTAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000309765.4 |
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| CDS CAA 72 bp | GCCTACAACTTTCCTGAGACCCACGAAGAAAGTAACTaGATTCTGGCAAGGAAGCCTTTTTCCAACACCAGG | + |
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Preference number: 6 (lower is better) Translates to: AYNFPETHEESN*ILARKPFSNTR Trigger: CCTGGTGTTGGAAAAAGGCTTCCTTGCCAGAATCAAGTTACTTTCTTCGTGGGTCTCAGGAAAGTTGTAGGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000309765.4 |
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| CDS CAA 72 bp | AGCACATCCAGTCTATCACAAGGCCACAGAGGCGTATaGATTATCCACTCTGACTCCCTCATTACCCAAATG | + |
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Preference number: 6 (lower is better) Translates to: STSSLSQGHRGV*IIHSDSLITQM Trigger: CATTTGGGTAATGAGGGAGTCAGAGTGGATAATCAATACGCCTCTGTGGCCTTGTGATAGACTGGATGTGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000309765.4 |
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| CDS CAA 90 bp | CATCAACTTGCCTACAACTTTCCTGAGACCCACGAAGAAAGTAACTaGATTCTGGCAAGGAAGCCTTTTTCCAACACCAGGCAGATATTC | + |
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Preference number: 6 (lower is better) Translates to: HQLAYNFPETHEESN*ILARKPFSNTRQIF Trigger: GAATATCTGCCTGGTGTTGGAAAAAGGCTTCCTTGCCAGAATCAAGTTACTTTCTTCGTGGGTCTCAGGAAAGTTGTAGGCAAGTTGATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000309765.4 |
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| CDS CAA 72 bp | ATGGGTCTGGTTTGTTTGGTGTTTAGGGACATCAACTaGCCTACAACTTTCCTGAGACCCACGAAGAAAGTA | + |
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Preference number: 6 (lower is better) Translates to: MGLVCLVFRDIN*PTTFLRPTKKV Trigger: TACTTTCTTCGTGGGTCTCAGGAAAGTTGTAGGCAAGTTGATGTCCCTAAACACCAAACAAACCAGACCCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000309765.4 |
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| CDS TCA 72 bp | AATAAACACAGAGGTTTCGGGACTGGTACTGCAAATTaGCATTCGCCGACCATAAAGTCTGCATTTCTAGAA | + |
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Preference number: 6 (lower is better) Translates to: NKHRGFGTGTAN*HSPTIKSAFLE Trigger: TTCTAGAAATGCAGACTTTATGGTCGGCGAATGTCAATTTGCAGTACCAGTCCCGAAACCTCTGTGTTTATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000309765.4 |
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| CDS CAA 90 bp | TCAGAGGTCTCATTAGCAACTTCTCCTAAGGAAGTGTTTACATCTTaGGGATCACGTTTTATTTCACTTTCTGCTGAGTTGGAAGCACAG | + |
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Preference number: 6 (lower is better) Translates to: SEVSLATSPKEVFTS*GSRFISLSAELEAQ Trigger: CTGTGCTTCCAACTCAGCAGAAAGTGAAATAAAACGTGATCCCAAAGATGTAAACACTTCCTTAGGAGAAGTTGCTAATGAGACCTCTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000309765.4 |
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| CDS TCA 72 bp | CCTTCATTGGAGACTCCAAAGAGGTCTGGGTCATCTTaGATTACATCAATTAAGAGGACGTCATCTTCATAT | + |
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Preference number: 6 (lower is better) Translates to: PSLETPKRSGSS*ITSIKRTSSSY Trigger: ATATGAAGATGACGTCCTCTTAATTGATGTAATTCAAGATGACCCAGACCTCTTTGGAGTCTCCAATGAAGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000309765.4 |
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| CDS CCA 72 bp | CTTTCCTTACCCAAAGACTGCAAGCATTCCACTGTTTaGAAAGATTCCGAACTGGTTAATGATTCCTTTCTT | + |
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Preference number: 6 (lower is better) Translates to: LSLPKDCKHSTV*KDSELVNDSFL Trigger: AAGAAAGGAATCATTAACCAGTTCGGAATCTTTCCAAACAGTGGAATGCTTGCAGTCTTTGGGTAAGGAAAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000309765.4 |
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| CDS CCA 72 bp | CTTAGTTATTTTTCTACCCCTAACTTCACTGGACACTaGTCGGAATGTTTCTTGTTCATTACAGCAGAAGGA | + |
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Preference number: 6 (lower is better) Translates to: LSYFSTPNFTGH*SECFLFITAEG Trigger: TCCTTCTGCTGTAATGAACAAGAAACATTCCGACCAGTGTCCAGTGAAGTTAGGGGTAGAAAAATAACTAAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000309765.4 |
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| CDS TCA 72 bp | GGCCAAGTTCTTTTACCAGTCATAGGTATTGTTCTCTaGCAGCTTAACTTCAATTCTTCAGATGCACTTCTT | + |
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Preference number: 6 (lower is better) Translates to: GQVLLPVIGIVL*QLNFNSSDALL Trigger: AAGAAGTGCATCTGAAGAATTGAAGTTAAGCTGTCAGAGAACAATACCTATGACTGGTAAAAGAACTTGGCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000309765.4 |
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| CDS CCA 72 bp | AATAATTTGGAGTCAGTTAAATGGGTCTGGTTTGTTTaGTGTTTAGGGACATCAACTTGCCTACAACTTTCC | + |
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Preference number: 6 (lower is better) Translates to: NNLESVKWVWFV*CLGTSTCLQLS Trigger: GGAAAGTTGTAGGCAAGTTGATGTCCCTAAACACCAAACAAACCAGACCCATTTAACTGACTCCAAATTATT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000309765.4 |
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| CDS CCA 72 bp | AGAAACAATATTGCCTGGTTCAGAGACGTGATTAGATaGTTTGCTATTGTTACCTTGCTTTGTAAAGCTTGG | + |
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Preference number: 6 (lower is better) Translates to: RNNIAWFRDVIR*FAIVTLLCKAW Trigger: CCAAGCTTTACAAAGCAAGGTAACAATAGCAAACCATCTAATCACGTCTCTGAACCAGGCAATATTGTTTCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000309765.4 |
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| CDS TCA 72 bp | ACTATCTGCAGTATCTGTGTAGAAGTTCCAGGACTCTaGATACTACTAGCATTAGATACCATGAAGATTTCA | + |
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Preference number: 6 (lower is better) Translates to: TICSICVEVPGL*ILLALDTMKIS Trigger: TGAAATCTTCATGGTATCTAATGCTAGTAGTATTCAGAGTCCTGGAACTTCTACACAGATACTGCAGATAGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000309765.4 |
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| CDS GCA 72 bp | TTAATACCTTCTATTATACTTTCCTTACCCAAAGACTaGAAGCATTCCACTGTTTGGAAAGATTCCGAACTG | + |
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Preference number: 6 (lower is better) Translates to: LIPSIILSLPKD*KHSTVWKDSEL Trigger: CAGTTCGGAATCTTTCCAAACAGTGGAATGCTTGCAGTCTTTGGGTAAGGAAAGTATAATAGAAGGTATTAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000309765.4 |
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| CDS CAA 72 bp | TCATTAGCAACTTCTCCTAAGGAAGTGTTTACATCTTaGGGATCACGTTTTATTTCACTTTCTGCTGAGTTG | + |
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Preference number: 6 (lower is better) Translates to: SLATSPKEVFTS*GSRFISLSAEL Trigger: CAACTCAGCAGAAAGTGAAATAAAACGTGATCCCAAAGATGTAAACACTTCCTTAGGAGAAGTTGCTAATGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000309765.4 |
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| CDS CAA 90 bp | GACCCTCTTCTGCTCAGTTCCTCTGATTTTATCTTTTTATCATCCTaGATTATAGGTTCCTTTATAACCATTAAAGTAGGTTCTACTGCA | + |
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Preference number: 6 (lower is better) Translates to: DPLLLSSSDFIFLSS*IIGSFITIKVGSTA Trigger: TGCAGTAGAACCTACTTTAATGGTTATAAAGGAACCTATAATCAAGGATGATAAAAAGATAAAATCAGAGGAACTGAGCAGAAGAGGGTC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000309765.4 |
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| CDS CAA 90 bp | ATTGCCTGGTTCAGAGACGTGATTAGATGGTTTGCTATTGTTACCTaGCTTTGTAAAGCTTGGAGAAATACTATAGGATTTCTTATTGTA | + |
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Preference number: 6 (lower is better) Translates to: IAWFRDVIRWFAIVT*LCKAWRNTIGFLIV Trigger: TACAATAAGAAATCCTATAGTATTTCTCCAAGCTTTACAAAGCAAGGTAACAATAGCAAACCATCTAATCACGTCTCTGAACCAGGCAAT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000309765.4 |
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| CDS CCA 72 bp | CTTTGTAATAATAATTTGGAGTCAGTTAAATGGGTCTaGTTTGTTTGGTGTTTAGGGACATCAACTTGCCTA | + |
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Preference number: 6 (lower is better) Translates to: LCNNNLESVKWV*FVWCLGTSTCL Trigger: TAGGCAAGTTGATGTCCCTAAACACCAAACAAACCAGACCCATTTAACTGACTCCAAATTATTATTACAAAG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000309765.4 |
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| CDS TCA 72 bp | TCTTTATTAGAAACAATATTGCCTGGTTCAGAGACGTaGTTAGATGGTTTGCTATTGTTACCTTGCTTTGTA | + |
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Preference number: 6 (lower is better) Translates to: SLLETILPGSET*LDGLLLLPCFV Trigger: TACAAAGCAAGGTAACAATAGCAAACCATCTAATCACGTCTCTGAACCAGGCAATATTGTTTCTAATAAAGA 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000309765.4 |
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| CDS TCA 72 bp | AAATCATTCATCCAGGTATTCAGTATTGTGTCTTCTTaGCGACCACTTAGATTCAAAGGAGGTACTAATAAA | + |
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Preference number: 6 (lower is better) Translates to: KSFIQVFSIVSS*RPLRFKGGTNK Trigger: TTTATTAGTACCTCCTTTGAATCTAAGTGGTCGTCAAGAAGACACAATACTGAATACCTGGATGAATGATTT 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000309765.4 |
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| CDS CCA 72 bp | AAGGAACTTTGTAATAATAATTTGGAGTCAGTTAAATaGGTCTGGTTTGTTTGGTGTTTAGGGACATCAACT | + |
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Preference number: 6 (lower is better) Translates to: KELCNNNLESVK*VWFVWCLGTST Trigger: AGTTGATGTCCCTAAACACCAAACAAACCAGACCCATTTAACTGACTCCAAATTATTATTACAAAGTTCCTT 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000309765.4 |
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| CDS CCA 72 bp | TCTTCCCAGTACACCTTTATCTACTTTACTGTTTTGTaGATCTTTGCTAACTGTTTCAGCAAATTCACAAAA | + |
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Preference number: 6 (lower is better) Translates to: SSQYTFIYFTVL*IFANCFSKFTK Trigger: TTTTGTGAATTTGCTGAAACAGTTAGCAAAGATCCACAAAACAGTAAAGTAGATAAAGGTGTACTGGGAAGA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000309765.4 |
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| CDS CAA 72 bp | AATTCTTCCCAGTACACCTTTATCTACTTTACTGTTTaGTGGATCTTTGCTAACTGTTTCAGCAAATTCACA | + |
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Preference number: 6 (lower is better) Translates to: NSSQYTFIYFTV*WIFANCFSKFT Trigger: TGTGAATTTGCTGAAACAGTTAGCAAAGATCCACAAAACAGTAAAGTAGATAAAGGTGTACTGGGAAGAATT 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000309765.4 |
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