RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TOP1MT (Homo sapiens)

Ensembl gene IDs: ENSG00000184428

Ensembl transcript IDs: ENST00000329245.9, ENST00000505857.2, ENST00000517857.1, ENST00000518007.5, ENST00000518760.5, ENST00000518951.6, ENST00000519139.6, ENST00000519148.5, ENST00000519591.5, ENST00000519977.5, ENST00000520950.5, ENST00000521024.1, ENST00000521193.5, ENST00000522041.5, ENST00000522043.1, ENST00000522121.5, ENST00000523417.5, ENST00000523676.5, ENST00000524092.1

Found 313 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp ACCACCCACCCAGACGCCTGGTGGCTCACAGCTGCAGGGACACGGTaGTTCTGTGGCCGCAGGCGTGAGGACCCGGGTCCTGGCCTCCCT +
Preference number: 1 (lower is better)
Translates to: TTHPDAWWLTAAGTR*FCGRRREDPGPGLP
Trigger: AGGGAGGCCAGGACCCGGGTCCTCACGCCTGCGGCCACAGAAGCACCGTGTCCCTGCAGCTGTGAGCCACCAGGCGTCTGGGTGGGTGGT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519977.5
3UTR CCA 90 bp GCTGCCAGCCACGTGACGGTGTTATCGGAGCGCACCTCCTTCCACTaGTGCCCCGCCGGCGGCTCGGGGATCTTCGAGTCCCTGCTGCAG +
Preference number: 1 (lower is better)
Translates to: AASHVTVLSERTSFH*CPAGGSGIFESLLQ
Trigger: CTGCAGCAGGGACTCGAAGATCCCCGAGCCGCCGGCGGGGCACCAGTGGAAGGAGGTGCGCTCCGATAACACCGTCACGTGGCTGGCAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518951.6
3UTR TCA 90 bp TGCTGTCCTCGGCGCGCGTCAGGGCCCGCAGCTGCTCCTGCAGAGTaGTGGAGGCGTTGTAGGTCCGGAACACCTTGGCCGTCAGCCCGT +
Preference number: 1 (lower is better)
Translates to: CCPRRASGPAAAPAE*WRRCRSGTPWPSAR
Trigger: ACGGGCTGACGGCCAAGGTGTTCCGGACCTACAACGCCTCCATCACTCTGCAGGAGCAGCTGCGGGCCCTGACGCGCGCCGAGGACAGCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518951.6
3UTR GCA 90 bp GCCAGCCACGTGACGGTGTTATCGGAGCGCACCTCCTTCCACTGGTaGCCCGCCGGCGGCTCGGGGATCTTCGAGTCCCTGCTGCAGTTG +
Preference number: 1 (lower is better)
Translates to: ASHVTVLSERTSFHW*PAGGSGIFESLLQL
Trigger: CAACTGCAGCAGGGACTCGAAGATCCCCGAGCCGCCGGCGGGGCACCAGTGGAAGGAGGTGCGCTCCGATAACACCGTCACGTGGCTGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518951.6
3UTR GCA 90 bp CACGGGCTCAGGGTCCGTCCCTGTGTCTCCCGGGGCCGCCGGATGTaGCACCCACTCCTGTTCTGCTGCTTTGTGACACTGCCTCCCTTC +
Preference number: 1 (lower is better)
Translates to: HGLRVRPCVSRGRRM*HPLLFCCFVTLPPF
Trigger: GAAGGGAGGCAGTGTCACAAAGCAGCAGAACAGGAGTGGGTGGCACATCCGGCGGCCCCGGGAGACACAGGGACGGACCCTGAGCCCGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522121.5
3UTR CCA 90 bp CCGCCTCTTCCGAGGAGCTCAGGTACGACACCATCTGTGCCAGGATaGAGCCCTGCTCGGCCACAACCACGGGCTCAGGGTCCGTCCCTG +
Preference number: 1 (lower is better)
Translates to: PPLPRSSGTTPSVPG*SPARPQPRAQGPSL
Trigger: CAGGGACGGACCCTGAGCCCGTGGTTGTGGCCGAGCAGGGCTCCATCCTGGCACAGATGGTGTCGTACCTGAGCTCCTCGGAAGAGGCGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522121.5
3UTR GCA 90 bp TCCGAGGAGCTCAGGTACGACACCATCTGTGCCAGGATGGAGCCCTaGTCGGCCACAACCACGGGCTCAGGGTCCGTCCCTGTGTCTCCC +
Preference number: 1 (lower is better)
Translates to: SEELRYDTICARMEP*SATTTGSGSVPVSP
Trigger: GGGAGACACAGGGACGGACCCTGAGCCCGTGGTTGTGGCCGAGCAGGGCTCCATCCTGGCACAGATGGTGTCGTACCTGAGCTCCTCGGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522121.5
3UTR TCA 90 bp GGCACCAGCTCACGGTCCCAGTCCAGGCTCGGCCACTTAGGCCTGTaGGACCTCAGGAGCTGCTGTCAAACGTGTCTCGCTGTGGGATGG +
Preference number: 1 (lower is better)
Translates to: GTSSRSQSRLGHLGL*DLRSCCQTCLAVGW
Trigger: CCATCCCACAGCGAGACACGTTTGACAGCAGCTCCTGAGGTCTCACAGGCCTAAGTGGCCGAGCCTGGACTGGGACCGTGAGCTGGTGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522121.5
3UTR GCA 90 bp CCCTGTGTCTCCCGGGGCCGCCGGATGTGCCACCCACTCCTGTTCTaGTGCTTTGTGACACTGCCTCCCTTCCTAGCTCTGCTAGTGACT +
Preference number: 1 (lower is better)
Translates to: PCVSRGRRMCHPLLF*CFVTLPPFLALLVT
Trigger: AGTCACTAGCAGAGCTAGGAAGGGAGGCAGTGTCACAAAGCAGCAGAACAGGAGTGGGTGGCACATCCGGCGGCCCCGGGAGACACAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522121.5
3UTR TCA 90 bp TTACTCAGGGCTGCTCTGGTCCTGCCTCCCCAAGGAGAGCCCTTGTaGGGTCACAGGTGCAGAAGGAAGCCCGTCCGATGCAGACGGATG +
Preference number: 1 (lower is better)
Translates to: LLRAALVLPPQGEPL*GHRCRRKPVRCRRM
Trigger: CATCCGTCTGCATCGGACGGGCTTCCTTCTGCACCTGTGACCTCACAAGGGCTCTCCTTGGGGAGGCAGGACCAGAGCAGCCCTGAGTAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519977.5
3UTR GCA 90 bp TGTGTCTCCCGGGGCCGCCGGATGTGCCACCCACTCCTGTTCTGCTaGTTTGTGACACTGCCTCCCTTCCTAGCTCTGCTAGTGACTGGA +
Preference number: 1 (lower is better)
Translates to: CVSRGRRMCHPLLFC*FVTLPPFLALLVTG
Trigger: TCCAGTCACTAGCAGAGCTAGGAAGGGAGGCAGTGTCACAAAGCAGCAGAACAGGAGTGGGTGGCACATCCGGCGGCCCCGGGAGACACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522121.5
3UTR TCA 90 bp ACAGCAACCCCAACTCTGGGACCCAGTTTCTCTACTGGCACTTGCTaGGTAACCACCCACCCAGACGCCTGGTGGCTCACAGCTGCAGGG +
Preference number: 1 (lower is better)
Translates to: TATPTLGPSFSTGTC*VTTHPDAWWLTAAG
Trigger: CCCTGCAGCTGTGAGCCACCAGGCGTCTGGGTGGGTGGTTACTCAGCAAGTGCCAGTAGAGAAACTGGGTCCCAGAGTTGGGGTTGCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519977.5
3UTR TCA 90 bp GACCTCAGGAGCTGCTGTCAAACGTGTCTCGCTGTGGGATGGGGATaGTCCGCCTCTTCCGAGGAGCTCAGGTACGACACCATCTGTGCC +
Preference number: 1 (lower is better)
Translates to: DLRSCCQTCLAVGWG*SASSEELRYDTICA
Trigger: GGCACAGATGGTGTCGTACCTGAGCTCCTCGGAAGAGGCGGATCATCCCCATCCCACAGCGAGACACGTTTGACAGCAGCTCCTGAGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522121.5
3UTR CCA 90 bp CGCTGTCTCGTCTTCATTTCCCGAGACTTCCAGTCAGCCCGGTACTaGGAGCGGATCTCGTCCACAAATCCCCGCAGGCGTCGAGCTGTT +
Preference number: 1 (lower is better)
Translates to: RCLVFISRDFQSARY*ERISSTNPRRRRAV
Trigger: AACAGCTCGACGCCTGCGGGGATTTGTGGACGAGATCCGCTCCCAGTACCGGGCTGACTGGAAGTCTCGGGAAATGAAGACGAGACAGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518951.6
3UTR GCA 90 bp TCTGCATCGACTTCTCGAACGTACTGGGGGTTGCTCGCTGATGGTTaGAGAGAATGGCCACGACTCGGTTGGCTCGGTTGTAGGATAAGA +
Preference number: 1 (lower is better)
Translates to: SASTSRTYWGLLADG*REWPRLGWLGCRIR
Trigger: TCTTATCCTACAACCGAGCCAACCGAGTCGTGGCCATTCTCTGCAACCATCAGCGAGCAACCCCCAGTACGTTCGAGAAGTCGATGCAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000518951.6
3UTR CCA 90 bp GTTTCTCCTTTCGTTTCCTACACAACAAAAACTCTGCACAGCCCATaGACAAAAGCCCAGGCTTGCGGGCACCAGCTCACGGTCCCAGTC +
Preference number: 1 (lower is better)
Translates to: VSPFVSYTTKTLHSP*TKAQACGHQLTVPV
Trigger: GACTGGGACCGTGAGCTGGTGCCCGCAAGCCTGGGCTTTTGTCCATGGGCTGTGCAGAGTTTTTGTTGTGTAGGAAACGAAAGGAGAAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000522121.5
3UTR CCA 90 bp CTGCTCAGGACTTTCCGGGCTGCGGCCTTGTCCACAAAGTATCTGTaGATCTCCGTGAAGTCACACTTGTCCAGGCTCTTGATGACTTCC +
Preference number: 1 (lower is better)
Translates to: LLRTFRAAALSTKYL*ISVKSHLSRLLMTS
Trigger: GGAAGTCATCAAGAGCCTGGACAAGTGTGACTTCACGGAGATCCACAGATACTTTGTGGACAAGGCCGCAGCCCGGAAAGTCCTGAGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522121.5
ENST00000523417.5
3UTR GCA 90 bp CACAGGCAACTGTTTCTCCTTTCGTTTCCTACACAACAAAAACTCTaGACAGCCCATGGACAAAAGCCCAGGCTTGCGGGCACCAGCTCA +
Preference number: 1 (lower is better)
Translates to: HRQLFLLSFPTQQKL*TAHGQKPRLAGTSS
Trigger: TGAGCTGGTGCCCGCAAGCCTGGGCTTTTGTCCATGGGCTGTGCAGAGTTTTTGTTGTGTAGGAAACGAAAGGAGAAACAGTTGCCTGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000522121.5
3UTR-3UTR GCA 90 bp GCAGCCATCGGCCTCCGGGTGCAGCTGGACGTGCTCCACGCGGAGGGAACAGCAACCTCCTTCCACTGGTaGCCCGCCGGCGGCTCGGGG +
Preference number: 2 (lower is better)
Translates to: AAIGLRVQLDVLHAEGTATSFHW*PAGGSG
Trigger: CCCCGAGCCGCCGGCGGGGCACCAGTGGAAGGAGGT...TGCTGTTCCCTCCGCGTGGAGCACGTCCAGCTGCACCCGGAGGCCGATGGCTGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518951.6
3UTR-3UTR GCA 90 bp TGCTCGGCCACAACCACGGGCTCAGGGTCCGTCCCTGTGTCTCCCGGGGCCGCCCCACTCCTGTTCTGCTaGTTTGTGACACTGCCTCCC +
Preference number: 2 (lower is better)
Translates to: CSATTTGSGSVPVSPGAAPLLFC*FVTLPP
Trigger: GGGAGGCAGTGTCACAAAGCAGCAGAACAGGAGTGG...GGCGGCCCCGGGAGACACAGGGACGGACCCTGAGCCCGTGGTTGTGGCCGAGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522121.5
3UTR-3UTR CCA 90 bp GCCCGTCCATCAGCTCCTGGAGGTGCTTGTTCAGGCTGGTCGTCTGGGGAGGAAGCCTCCGGGTGCAGCTaGACGTGCTCCACGCGGAGG +
Preference number: 2 (lower is better)
Translates to: ARPSAPGGACSGWSSGEEASGCS*TCSTRR
Trigger: CCTCCGCGTGGAGCACGTCCAGCTGCACCCGGAGGC...TTCCTCCCCAGACGACCAGCCTGAACAAGCACCTCCAGGAGCTGATGGACGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518951.6
3UTR-3UTR GCA 90 bp ACTCTGCACAGCCCATGGACAAAAGCCCAGGCTTGCGGGCACCAGCTCACGGTCGCCAGGATGGAGCCCTaGTCGGCCACAACCACGGGC +
Preference number: 2 (lower is better)
Translates to: TLHSPWTKAQACGHQLTVARMEP*SATTTG
Trigger: GCCCGTGGTTGTGGCCGAGCAGGGCTCCATCCTGGC...GACCGTGAGCTGGTGCCCGCAAGCCTGGGCTTTTGTCCATGGGCTGTGCAGAGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522121.5
3UTR-3UTR CCA 90 bp AGCGGATCTCGTCCACAAATCCCCGCAGGCGTCGAGCTGTTTCAAACTTCTGCCCGCACCTCCTTCCACTaGTGCCCCGCCGGCGGCTCG +
Preference number: 2 (lower is better)
Translates to: SGSRPQIPAGVELFQTSARTSFH*CPAGGS
Trigger: CGAGCCGCCGGCGGGGCACCAGTGGAAGGAGGTGCG...GGCAGAAGTTTGAAACAGCTCGACGCCTGCGGGGATTTGTGGACGAGATCCGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518951.6
3UTR-3UTR TCA 90 bp GGGCCACCGCCCGCTGTCTCGTCTTCATTTCCCGAGACTTCCAGTCAGCCCGGTAAGCTGCCAGCCACGTaGCGGTGTTATCGGAGCGCA +
Preference number: 2 (lower is better)
Translates to: GPPPAVSSSFPETSSQPGKLPAT*RCYRSA
Trigger: TGCGCTCCGATAACACCGTCACGTGGCTGGCAGCTT...ACCGGGCTGACTGGAAGTCTCGGGAAATGAAGACGAGACAGCGGGCGGTGGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518951.6
3UTR-3UTR GCA 90 bp CTCTACTGGCACTTGCTGAGTAACCACCCACCCAGACGCCTGGTGGCTCACAGCCCGGTTACTCAGGGCTaGTCTGGTCCTGCCTCCCCA +
Preference number: 2 (lower is better)
Translates to: LYWHLLSNHPPRRLVAHSPVTQG*SGPASP
Trigger: TGGGGAGGCAGGACCAGAGCAGCCCTGAGTAACCGG...GCTGTGAGCCACCAGGCGTCTGGGTGGGTGGTTACTCAGCAAGTGCCAGTAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519977.5
3UTR-3UTR CCA 90 bp GTCCCAGCTTACGGTCAGCCTGTCGAAGAGGTCGTCCCGGGGGTCCTTGTTCTCCAGTCAGCCCGGTACTaGGAGCGGATCTCGTCCACA +
Preference number: 2 (lower is better)
Translates to: VPAYGQPVEEVVPGVLVLQSARY*ERISST
Trigger: TGTGGACGAGATCCGCTCCCAGTACCGGGCTGACTG...GAGAACAAGGACCCCCGGGACGACCTCTTCGACAGGCTGACCGTAAGCTGGGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000518951.6
3UTR CAA 90 bp GTCCACAGCAACCCCAACTCTGGGACCCAGTTTCTCTACTGGCACTaGCTGAGTAACCACCCACCCAGACGCCTGGTGGCTCACAGCTGC +
Preference number: 2 (lower is better)
Translates to: VHSNPNSGTQFLYWH*LSNHPPRRLVAHSC
Trigger: GCAGCTGTGAGCCACCAGGCGTCTGGGTGGGTGGTTACTCAGCAAGTGCCAGTAGAGAAACTGGGTCCCAGAGTTGGGGTTGCTGTGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519977.5
3UTR-3UTR GCA 90 bp TCTGGAGATTCTGCATCGACTTCTCGAACGTACTGGGGGTTGCTCGCTGATGGTCCATCGGCCTCCGGGTaGAGCTGGACGTGCTCCACG +
Preference number: 2 (lower is better)
Translates to: SGDSASTSRTYWGLLADGPSASG*SWTCST
Trigger: CGTGGAGCACGTCCAGCTGCACCCGGAGGCCGATGG...ACCATCAGCGAGCAACCCCCAGTACGTTCGAGAAGTCGATGCAGAATCTCCAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000518951.6
3UTR-3UTR TCA 90 bp CCGTCCATCAGCTCCTGGAGGTGCTTGTTCAGGCTGGTCGTCTGGGGAGGAAAAGTGCCAGCTTATCGATaGAATACAGGGCCACCGCCC +
Preference number: 2 (lower is better)
Translates to: PSISSWRCLFRLVVWGGKVPAYR*NTGPPP
Trigger: GGGCGGTGGCCCTGTATTTCATCGATAAGCTGGCAC...TTTTCCTCCCCAGACGACCAGCCTGAACAAGCACCTCCAGGAGCTGATGGACGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518951.6
3UTR-3UTR GCA 90 bp TCTGGAGATTCTGCATCGACTTCTCGAACGTACTGGGGGTTGCTCGCTGATGGTGCCCGCAGCTGCTCCTaGAGAGTGATGGAGGCGTTG +
Preference number: 2 (lower is better)
Translates to: SGDSASTSRTYWGLLADGARSCS*RVMEAL
Trigger: CAACGCCTCCATCACTCTGCAGGAGCAGCTGCGGGC...ACCATCAGCGAGCAACCCCCAGTACGTTCGAGAAGTCGATGCAGAATCTCCAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000518951.6
3UTR-3UTR GCA 90 bp GAGGTGAGGGACAAGTATCCAGTCCACAGCAACCCCAACTCTGGGACCCAGTTTAGGAAGCCCGTCCGATaGAGACGGATGTTCCAGCCA +
Preference number: 2 (lower is better)
Translates to: EVRDKYPVHSNPNSGTQFRKPVR*RRMFQP
Trigger: TGGCTGGAACATCCGTCTGCATCGGACGGGCTTCCT...AAACTGGGTCCCAGAGTTGGGGTTGCTGTGGACTGGATACTTGTCCCTCACCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519977.5
3UTR-3UTR GCA 90 bp CTCGAACGTACTGGGGGTTGCTCGCTGATGGTTGCAGAGAATGGCCACGACTCGATAATTACGTGGTTTTaGGGGGCCGTCCCAGCTTAC +
Preference number: 2 (lower is better)
Translates to: LERTGGCSLMVAENGHDSIITWF*GAVPAY
Trigger: GTAAGCTGGGACGGCCCCGCAAAACCACGTAATTAT...CGAGTCGTGGCCATTCTCTGCAACCATCAGCGAGCAACCCCCAGTACGTTCGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000518951.6
3UTR-3UTR TCA 90 bp TTTCGTTTCCTACACAACAAAAACTCTGCACAGCCCATGGACAAAAGCCCAGGCGCTGTGGGATGGGGATaGTCCGCCTCTTCCGAGGAG +
Preference number: 2 (lower is better)
Translates to: FRFLHNKNSAQPMDKSPGAVGWG*SASSEE
Trigger: CTCCTCGGAAGAGGCGGATCATCCCCATCCCACAGC...GCCTGGGCTTTTGTCCATGGGCTGTGCAGAGTTTTTGTTGTGTAGGAAACGAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000522121.5
3UTR-3UTR TCA 90 bp TCTGGAGATTCTGCATCGACTTCTCGAACGTACTGGGGGTTGCTCGCTGATGGTCCACATCCTCTGGCGTaGTCCTTCTCTTCAGCATCC +
Preference number: 2 (lower is better)
Translates to: SGDSASTSRTYWGLLADGPHPLA*SFSSAS
Trigger: GGATGCTGAAGAGAAGGATCACGCCAGAGGATGTGG...ACCATCAGCGAGCAACCCCCAGTACGTTCGAGAAGTCGATGCAGAATCTCCAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000518951.6
3UTR-3UTR TCA 90 bp CGTCCATCAGCTCCTGGAGGTGCTTGTTCAGGCTGGTCGTCTGGGGAGGAAAATTACTTGATGGAGTTCTaGACGCTCTCGGTCCAAGCT +
Preference number: 2 (lower is better)
Translates to: RPSAPGGACSGWSSGEENYLMEF*TLSVQA
Trigger: AGCTTGGACCGAGAGCGTTCAGAACTCCATCAAGTA...ATTTTCCTCCCCAGACGACCAGCCTGAACAAGCACCTCCAGGAGCTGATGGACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518951.6
3UTR CAA 90 bp GCGGCCTTGTCCACAAAGTATCTGTGGATCTCCGTGAAGTCACACTaGTCCAGGCTCTTGATGACTTCCCTCTCTTCCACCGCCATTTCC +
Preference number: 2 (lower is better)
Translates to: AALSTKYLWISVKSH*SRLLMTSLSSTAIS
Trigger: GGAAATGGCGGTGGAAGAGAGGGAAGTCATCAAGAGCCTGGACAAGTGTGACTTCACGGAGATCCACAGATACTTTGTGGACAAGGCCGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522121.5
ENST00000523417.5
3UTR-3UTR TCA 90 bp CTCCGTGAAGTCACACTTGTCCAGGCTCTTGATGACTTCCCTCTCTTCCACCGCGACCTCACTGAGAAGTaGAAAGGCAAAGTCTGGGAG +
Preference number: 2 (lower is better)
Translates to: LREVTLVQALDDFPLFHRDLTEK*KGKVWE
Trigger: CTCCCAGACTTTGCCTTTTCACTTCTCAGTGAGGTC...GCGGTGGAAGAGAGGGAAGTCATCAAGAGCCTGGACAAGTGTGACTTCACGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523417.5
3UTR-3UTR CCA 90 bp TTTCGTTTCCTACACAACAAAAACTCTGCACAGCCCATGGACAAAAGCCCAGGCAAACGTGTCTCGCTGTaGGATGGGGATGATCCGCCT +
Preference number: 2 (lower is better)
Translates to: FRFLHNKNSAQPMDKSPGKRVSL*DGDDPP
Trigger: AGGCGGATCATCCCCATCCCACAGCGAGACACGTTT...GCCTGGGCTTTTGTCCATGGGCTGTGCAGAGTTTTTGTTGTGTAGGAAACGAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000522121.5
3UTR CAA 90 bp ACAAAGTATCTGTGGATCTCCGTGAAGTCACACTTGTCCAGGCTCTaGATGACTTCCCTCTCTTCCACCGCCATTTCCATAAAAGACAGA +
Preference number: 2 (lower is better)
Translates to: TKYLWISVKSHLSRL*MTSLSSTAISIKDR
Trigger: TCTGTCTTTTATGGAAATGGCGGTGGAAGAGAGGGAAGTCATCAAGAGCCTGGACAAGTGTGACTTCACGGAGATCCACAGATACTTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523417.5
3UTR GCA 72 bp CCAGACGCCTGGTGGCTCACAGCTGCAGGGACACGGTaGTTCTGTGGCCGCAGGCGTGAGGACCCGGGTCCT +
Preference number: 3 (lower is better)
Translates to: PDAWWLTAAGTR*FCGRRREDPGP
Trigger: AGGACCCGGGTCCTCACGCCTGCGGCCACAGAAGCACCGTGTCCCTGCAGCTGTGAGCCACCAGGCGTCTGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519977.5
3UTR GCA 72 bp GTGACGGTGTTATCGGAGCGCACCTCCTTCCACTGGTaGCCCGCCGGCGGCTCGGGGATCTTCGAGTCCCTG +
Preference number: 3 (lower is better)
Translates to: VTVLSERTSFHW*PAGGSGIFESL
Trigger: CAGGGACTCGAAGATCCCCGAGCCGCCGGCGGGGCACCAGTGGAAGGAGGTGCGCTCCGATAACACCGTCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518951.6
3UTR GCA 72 bp GGGCCTGTTCCTCGGCTGTGCCCGGTTACTCAGGGCTaGTCTGGTCCTGCCTCCCCAAGGAGAGCCCTTGTG +
Preference number: 3 (lower is better)
Translates to: GPVPRLCPVTQG*SGPASPRRALV
Trigger: CACAAGGGCTCTCCTTGGGGAGGCAGGACCAGAGCAGCCCTGAGTAACCGGGCACAGCCGAGGAACAGGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519977.5
3UTR GCA 72 bp AGGGTCCGTCCCTGTGTCTCCCGGGGCCGCCGGATGTaGCACCCACTCCTGTTCTGCTGCTTTGTGACACTG +
Preference number: 3 (lower is better)
Translates to: RVRPCVSRGRRM*HPLLFCCFVTL
Trigger: CAGTGTCACAAAGCAGCAGAACAGGAGTGGGTGGCACATCCGGCGGCCCCGGGAGACACAGGGACGGACCCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522121.5
3UTR GCA 72 bp CTCAGGTACGACACCATCTGTGCCAGGATGGAGCCCTaGTCGGCCACAACCACGGGCTCAGGGTCCGTCCCT +
Preference number: 3 (lower is better)
Translates to: LRYDTICARMEP*SATTTGSGSVP
Trigger: AGGGACGGACCCTGAGCCCGTGGTTGTGGCCGAGCAGGGCTCCATCCTGGCACAGATGGTGTCGTACCTGAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522121.5
3UTR CCA 72 bp CCGAGGAGCTCAGGTACGACACCATCTGTGCCAGGATaGAGCCCTGCTCGGCCACAACCACGGGCTCAGGGT +
Preference number: 3 (lower is better)
Translates to: PRSSGTTPSVPG*SPARPQPRAQG
Trigger: ACCCTGAGCCCGTGGTTGTGGCCGAGCAGGGCTCCATCCTGGCACAGATGGTGTCGTACCTGAGCTCCTCGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522121.5
3UTR TCA 72 bp CACCCCCAGCTTACGGACAGCAGCCTCTTGCTCATGTaGCCGTCCCGTGTGTGCTCCTGGAGAGGAGGCTCC +
Preference number: 3 (lower is better)
Translates to: HPQLTDSSLLLM*PSRVCSWRGGS
Trigger: GGAGCCTCCTCTCCAGGAGCACACACGGGACGGTCACATGAGCAAGAGGCTGCTGTCCGTAAGCTGGGGGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000519977.5
3UTR GCA 72 bp TCCCGGGGCCGCCGGATGTGCCACCCACTCCTGTTCTaGTGCTTTGTGACACTGCCTCCCTTCCTAGCTCTG +
Preference number: 3 (lower is better)
Translates to: SRGRRMCHPLLF*CFVTLPPFLAL
Trigger: CAGAGCTAGGAAGGGAGGCAGTGTCACAAAGCAGCAGAACAGGAGTGGGTGGCACATCCGGCGGCCCCGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522121.5
3UTR CCA 72 bp CGGAACACCTTGGCCGTCAGCCCGTCCATCAGCTCCTaGAGGTGCTTGTTCAGGCTGGTCGTCTGGGGAGGA +
Preference number: 3 (lower is better)
Translates to: RNTLAVSPSISS*RCLFRLVVWGG
Trigger: TCCTCCCCAGACGACCAGCCTGAACAAGCACCTCCAGGAGCTGATGGACGGGCTGACGGCCAAGGTGTTCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518951.6
3UTR-3UTR CAA 90 bp GATAAGATCTTAGCTGCTATGCTGTCCTCGGCGCGCGTCAGGGCCCGCAGCTGCAAATTCCACCACGTGTaGGCAGCCATCGGCCTCCGG +
Preference number: 3 (lower is better)
Translates to: DKILAAMLSSARVRARSCKFHHV*AAIGLR
Trigger: CCGGAGGCCGATGGCTGCCAACACGTGGTGGAATTT...GCAGCTGCGGGCCCTGACGCGCGCCGAGGACAGCATAGCAGCTAAGATCTTATC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518951.6
3UTR TCA 72 bp GTGCTCCTGGAGAGGAGGCTCCGGTGTCTCTTCCCATaGGGGCACTCATCTCATCGTGAGGGTCCCCCAGGA +
Preference number: 3 (lower is better)
Translates to: VLLERRLRCLFP*GHSSHREGPPG
Trigger: TCCTGGGGGACCCTCACGATGAGATGAGTGCCCTCATGGGAAGAGACACCGGAGCCTCCTCTCCAGGAGCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000519977.5
3UTR GCA 72 bp CGGGGCCGCCGGATGTGCCACCCACTCCTGTTCTGCTaGTTTGTGACACTGCCTCCCTTCCTAGCTCTGCTA +
Preference number: 3 (lower is better)
Translates to: RGRRMCHPLLFC*FVTLPPFLALL
Trigger: TAGCAGAGCTAGGAAGGGAGGCAGTGTCACAAAGCAGCAGAACAGGAGTGGGTGGCACATCCGGCGGCCCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522121.5
3UTR TCA 72 bp TCACGGTCCCAGTCCAGGCTCGGCCACTTAGGCCTGTaGGACCTCAGGAGCTGCTGTCAAACGTGTCTCGCT +
Preference number: 3 (lower is better)
Translates to: SRSQSRLGHLGL*DLRSCCQTCLA
Trigger: AGCGAGACACGTTTGACAGCAGCTCCTGAGGTCTCACAGGCCTAAGTGGCCGAGCCTGGACTGGGACCGTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522121.5
3UTR TCA 72 bp AGCTGCTGTCAAACGTGTCTCGCTGTGGGATGGGGATaGTCCGCCTCTTCCGAGGAGCTCAGGTACGACACC +
Preference number: 3 (lower is better)
Translates to: SCCQTCLAVGWG*SASSEELRYDT
Trigger: GGTGTCGTACCTGAGCTCCTCGGAAGAGGCGGATCATCCCCATCCCACAGCGAGACACGTTTGACAGCAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522121.5
3UTR TCA 72 bp AGTTCTGAACGCTCTCGGTCCAAGCTGCCAGCCACGTaGCGGTGTTATCGGAGCGCACCTCCTTCCACTGGT +
Preference number: 3 (lower is better)
Translates to: SSERSRSKLPAT*RCYRSAPPSTG
Trigger: ACCAGTGGAAGGAGGTGCGCTCCGATAACACCGTCACGTGGCTGGCAGCTTGGACCGAGAGCGTTCAGAACT
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518951.6
3UTR CCA 72 bp GAGACCTCAGGAGCTGCTGTCAAACGTGTCTCGCTGTaGGATGGGGATGATCCGCCTCTTCCGAGGAGCTCA +
Preference number: 3 (lower is better)
Translates to: ETSGAAVKRVSL*DGDDPPLPRSS
Trigger: TGAGCTCCTCGGAAGAGGCGGATCATCCCCATCCCACAGCGAGACACGTTTGACAGCAGCTCCTGAGGTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522121.5
3UTR-3UTR CAA 90 bp CTCGTCTTCATTTCCCGAGACTTCCAGTCAGCCCGGTACTGGGAGCGGATCTCGGAGTCCCTGCTGCAGTaGATAACCACATCCTCTGGC +
Preference number: 3 (lower is better)
Translates to: LVFISRDFQSARYWERISESLLQ*ITTSSG
Trigger: GCCAGAGGATGTGGTTATCAACTGCAGCAGGGACTC...CGAGATCCGCTCCCAGTACCGGGCTGACTGGAAGTCTCGGGAAATGAAGACGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518951.6
3UTR-3UTR CAA 90 bp CTCGAACGTACTGGGGGTTGCTCGCTGATGGTTGCAGAGAATGGCCACGACTCGTCGTCCCGGGGGTCCTaGTTCTCCATAAAGAGCTGT +
Preference number: 3 (lower is better)
Translates to: LERTGGCSLMVAENGHDSSSRGS*FSIKSC
Trigger: ACAGCTCTTTATGGAGAACAAGGACCCCCGGGACGA...CGAGTCGTGGCCATTCTCTGCAACCATCAGCGAGCAACCCCCAGTACGTTCGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000518951.6
3UTR GCA 72 bp GTACTTGATGGAGTTCTGAACGCTCTCGGTCCAAGCTaGCAGCCACGTGACGGTGTTATCGGAGCGCACCTC +
Preference number: 3 (lower is better)
Translates to: VLDGVLNALGPS*QPRDGVIGAHL
Trigger: GAGGTGCGCTCCGATAACACCGTCACGTGGCTGGCAGCTTGGACCGAGAGCGTTCAGAACTCCATCAAGTAC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518951.6
3UTR TCA 72 bp TGCATCGACTTCTCGAACGTACTGGGGGTTGCTCGCTaGTGGTTGCAGAGAATGGCCACGACTCGGTTGGCT +
Preference number: 3 (lower is better)
Translates to: CIDFSNVLGVAR*WLQRMATTRLA
Trigger: AGCCAACCGAGTCGTGGCCATTCTCTGCAACCATCAGCGAGCAACCCCCAGTACGTTCGAGAAGTCGATGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000518951.6
3UTR GCA 72 bp ACAAATCCCCGCAGGCGTCGAGCTGTTTCAAACTTCTaGCAAGCTGTCTCCCCCTTCAGCTTCGAGCAAGGG +
Preference number: 3 (lower is better)
Translates to: TNPRRRRAVSNF*QAVSPFSFEQG
Trigger: CCCTTGCTCGAAGCTGAAGGGGGAGACAGCTTGGCAGAAGTTTGAAACAGCTCGACGCCTGCGGGGATTTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000518951.6
3UTR GCA 72 bp GGTGTCGGCCGCCTCACCGTCCTCCTTCTCATTTCCTaGTCTCAGTGCCAGCTTATCGATGAAATACAGGGC +
Preference number: 3 (lower is better)
Translates to: GVGRLTVLLLIS*SQCQLIDEIQG
Trigger: GCCCTGTATTTCATCGATAAGCTGGCACTGAGAGCAGGAAATGAGAAGGAGGACGGTGAGGCGGCCGACACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518951.6
3UTR GCA 72 bp ACTTCTCGAACGTACTGGGGGTTGCTCGCTGATGGTTaGAGAGAATGGCCACGACTCGGTTGGCTCGGTTGT +
Preference number: 3 (lower is better)
Translates to: TSRTYWGLLADG*REWPRLGWLGC
Trigger: ACAACCGAGCCAACCGAGTCGTGGCCATTCTCTGCAACCATCAGCGAGCAACCCCCAGTACGTTCGAGAAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000518951.6
3UTR GCA 72 bp GAGATTCTGCATCGACTTCTCGAACGTACTGGGGGTTaGTCGCTGATGGTTGCAGAGAATGGCCACGACTCG +
Preference number: 3 (lower is better)
Translates to: EILHRLLERTGG*SLMVAENGHDS
Trigger: CGAGTCGTGGCCATTCTCTGCAACCATCAGCGAGCAACCCCCAGTACGTTCGAGAAGTCGATGCAGAATCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000518951.6
3UTR CCA 72 bp ACGTACTGGGGGTTGCTCGCTGATGGTTGCAGAGAATaGCCACGACTCGGTTGGCTCGGTTGTAGGATAAGA +
Preference number: 3 (lower is better)
Translates to: TYWGLLADGCRE*PRLGWLGCRIR
Trigger: TCTTATCCTACAACCGAGCCAACCGAGTCGTGGCCATTCTCTGCAACCATCAGCGAGCAACCCCCAGTACGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000518951.6
3UTR-3UTR CAA 90 bp GGTTGCTCGCTGATGGTTGCAGAGAATGGCCACGACTCGGTTGGCTCGGTTGTAAAGAGCTGTAAGTTCTaGTACACCGGCTTCTCCACC +
Preference number: 3 (lower is better)
Translates to: GCSLMVAENGHDSVGSVVKSCKF*YTGFST
Trigger: GGTGGAGAAGCCGGTGTACAAGAACTTACAGCTCTT...TACAACCGAGCCAACCGAGTCGTGGCCATTCTCTGCAACCATCAGCGAGCAACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518951.6
3UTR CCA 72 bp TTCGTTTCCTACACAACAAAAACTCTGCACAGCCCATaGACAAAAGCCCAGGCTTGCGGGCACCAGCTCACG +
Preference number: 3 (lower is better)
Translates to: FVSYTTKTLHSP*TKAQACGHQLT
Trigger: CGTGAGCTGGTGCCCGCAAGCCTGGGCTTTTGTCCATGGGCTGTGCAGAGTTTTTGTTGTGTAGGAAACGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000522121.5
3UTR CCA 72 bp ACTTTCCGGGCTGCGGCCTTGTCCACAAAGTATCTGTaGATCTCCGTGAAGTCACACTTGTCCAGGCTCTTG +
Preference number: 3 (lower is better)
Translates to: TFRAAALSTKYL*ISVKSHLSRLL
Trigger: CAAGAGCCTGGACAAGTGTGACTTCACGGAGATCCACAGATACTTTGTGGACAAGGCCGCAGCCCGGAAAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522121.5
ENST00000523417.5
3UTR CCA 72 bp TCGTCTGGAGATTCTGCATCGACTTCTCGAACGTACTaGGGGTTGCTCGCTGATGGTTGCAGAGAATGGCCA +
Preference number: 3 (lower is better)
Translates to: SSGDSASTSRTY*GLLADGCREWP
Trigger: TGGCCATTCTCTGCAACCATCAGCGAGCAACCCCCAGTACGTTCGAGAAGTCGATGCAGAATCTCCAGACGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518951.6
3UTR-3UTR CAA 90 bp GCTCAGGACTTTCCGGGCTGCGGCCTTGTCCACAAAGTATCTGTGGATCTCCGTGTTACAGTTTTCTGTTaGGAGACCTCACTGAGAAGT +
Preference number: 3 (lower is better)
Translates to: AQDFPGCGLVHKVSVDLRVTVFC*ETSLRS
Trigger: ACTTCTCAGTGAGGTCTCCAAACAGAAAACTGTAAC...ACGGAGATCCACAGATACTTTGTGGACAAGGCCGCAGCCCGGAAAGTCCTGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523417.5
3UTR TCA 72 bp CAACACTGTCTTGCTGGGGGTGAGGACTTTAACATGTaGACTGGAGGTGAGGGACAAGTATCCAGTCCACAG +
Preference number: 3 (lower is better)
Translates to: QHCLAGGEDFNM*TGGEGQVSSPQ
Trigger: CTGTGGACTGGATACTTGTCCCTCACCTCCAGTTCACATGTTAAAGTCCTCACCCCCAGCAAGACAGTGTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000519977.5
CDS-3UTR GCA 90 bp CCTTCCACTGGTGCCCCGCCGGCGGCTCGGGGATCTTCGAGTCCCTGCTGCAGTACCTCCTTCCACTGGTaGCCCGCCGGCGGCTCGGGG +
Preference number: 4 (lower is better)
Translates to: PSTGAPPAARGSSSPCCSTSFHW*PAGGSG
Trigger: CCCCGAGCCGCCGGCGGGGCACCAGTGGAAGGAGGT...ACTGCAGCAGGGACTCGAAGATCCCCGAGCCGCCGGCGGGGCACCAGTGGAAGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518951.6
CDS-3UTR GCA 90 bp ACCTCCTTCCACTGGTGCCCCGCCGGCGGCTCGGGGATCTTCGAGTCCCTGCTGGCTCCACTGCCCTTCTaGGTCCTGCGCGAGCCCGGG +
Preference number: 4 (lower is better)
Translates to: TSFHWCPAGGSGIFESLLAPLPF*VLREPG
Trigger: CCCGGGCTCGCGCAGGACGCAGAAGGGCAGTGGAGC...CAGCAGGGACTCGAAGATCCCCGAGCCGCCGGCGGGGCACCAGTGGAAGGAGGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518951.6
CDS-3UTR GCA 90 bp GGGCCTGTTCCTCGGCTGTGCCCGGTTACTCAGGGCTGCTCTGGTCCTGCCTCCGCCTGCACACTCAGCTaGGCCAGCTGCTCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: GPVPRLCPVTQGCSGPASACTLS*ASCSCS
Trigger: GCTGCAGGAGCAGCTGGCGCAGCTGAGTGTGCAGGC...GGAGGCAGGACCAGAGCAGCCCTGAGTAACCGGGCACAGCCGAGGAACAGGCCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519977.5
CDS-3UTR CCA 90 bp GCCCGTCCATCAGCTCCTGGAGGTGCTTGTTCAGGCTGGTCGTCTGGGGAGGAACGCACCTCCTTCCACTaGTGCCCCGCCGGCGGCTCG +
Preference number: 4 (lower is better)
Translates to: ARPSAPGGACSGWSSGEERTSFH*CPAGGS
Trigger: CGAGCCGCCGGCGGGGCACCAGTGGAAGGAGGTGCG...TTCCTCCCCAGACGACCAGCCTGAACAAGCACCTCCAGGAGCTGATGGACGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518951.6
CDS-3UTR GCA 90 bp GTCCCAGCTTACGGTCAGCCTGTCGAAGAGGTCGTCCCGGGGGTCCTTGTTCTCTGCCCTTCTGCGTCCTaGGCGAGCCCGGGACACCCC +
Preference number: 4 (lower is better)
Translates to: VPAYGQPVEEVVPGVLVLCPSAS*ASPGHP
Trigger: GGGGTGTCCCGGGCTCGCGCAGGACGCAGAAGGGCA...GAGAACAAGGACCCCCGGGACGACCTCTTCGACAGGCTGACCGTAAGCTGGGAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000518951.6
CDS-3UTR GCA 90 bp TGGGGCCTGTTCCTCGGCTGTGCCCGGTTACTCAGGGCTGCTCTGGTCCTGCCTGCTGCAGGGACACGGTaGTTCTGTGGCCGCAGGCGT +
Preference number: 4 (lower is better)
Translates to: WGLFLGCARLLRAALVLPAAGTR*FCGRRR
Trigger: ACGCCTGCGGCCACAGAAGCACCGTGTCCCTGCAGC...AGGCAGGACCAGAGCAGCCCTGAGTAACCGGGCACAGCCGAGGAACAGGCCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519977.5
CDS-3UTR GCA 90 bp TCCGAGGAGCTCAGGTACGACACCATCTGTGCCAGGATGGAGCCCTGCTCGGCCGCCAGGATGGAGCCCTaGTCGGCCACAACCACGGGC +
Preference number: 4 (lower is better)
Translates to: SEELRYDTICARMEPCSAARMEP*SATTTG
Trigger: GCCCGTGGTTGTGGCCGAGCAGGGCTCCATCCTGGC...GGCCGAGCAGGGCTCCATCCTGGCACAGATGGTGTCGTACCTGAGCTCCTCGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522121.5
CDS-3UTR TCA 90 bp ACCTCCTTCCACTGGTGCCCCGCCGGCGGCTCGGGGATCTTCGAGTCCCTGCTGGTGCCAGCTTATCGATaGAATACAGGGCCACCGCCC +
Preference number: 4 (lower is better)
Translates to: TSFHWCPAGGSGIFESLLVPAYR*NTGPPP
Trigger: GGGCGGTGGCCCTGTATTTCATCGATAAGCTGGCAC...CAGCAGGGACTCGAAGATCCCCGAGCCGCCGGCGGGGCACCAGTGGAAGGAGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518951.6
CDS-3UTR CCA 90 bp CCTTCCACTGGTGCCCCGCCGGCGGCTCGGGGATCTTCGAGTCCCTGCTGCAGTCCGTCCATCAGCTCCTaGAGGTGCTTGTTCAGGCTG +
Preference number: 4 (lower is better)
Translates to: PSTGAPPAARGSSSPCCSPSISS*RCLFRL
Trigger: CAGCCTGAACAAGCACCTCCAGGAGCTGATGGACGG...ACTGCAGCAGGGACTCGAAGATCCCCGAGCCGCCGGCGGGGCACCAGTGGAAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518951.6
CDS-3UTR GCA 90 bp CCATCGGCCTCCGGGTGCAGCTGGACGTGCTCCACGCGGAGGGAACAGCAGCCCTTGCTCGCTGATGGTTaGAGAGAATGGCCACGACTC +
Preference number: 4 (lower is better)
Translates to: PSASGCSWTCSTRREQQPLLADG*REWPRL
Trigger: GAGTCGTGGCCATTCTCTGCAACCATCAGCGAGCAA...GGGCTGCTGTTCCCTCCGCGTGGAGCACGTCCAGCTGCACCCGGAGGCCGATGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518951.6
CDS-3UTR GCA 90 bp GGGACCACCCCCAGCTTACGGACAGCAGCCTCTTGCTCATGTGACCGTCCCGTGCCGGTTACTCAGGGCTaGTCTGGTCCTGCCTCCCCA +
Preference number: 4 (lower is better)
Translates to: GTTPSLRTAASCSCDRPVPVTQG*SGPASP
Trigger: TGGGGAGGCAGGACCAGAGCAGCCCTGAGTAACCGG...CACGGGACGGTCACATGAGCAAGAGGCTGCTGTCCGTAAGCTGGGGGTGGTCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000519977.5
CDS-3UTR TCA 90 bp GAGCTCAGGTACGACACCATCTGTGCCAGGATGGAGCCCTGCTCGGCCACAACCGCTGTGGGATGGGGATaGTCCGCCTCTTCCGAGGAG +
Preference number: 4 (lower is better)
Translates to: ELRYDTICARMEPCSATTAVGWG*SASSEE
Trigger: CTCCTCGGAAGAGGCGGATCATCCCCATCCCACAGC...GGTTGTGGCCGAGCAGGGCTCCATCCTGGCACAGATGGTGTCGTACCTGAGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522121.5
CDS-3UTR GCA 90 bp CTCGAACGTACTGGGGGTTGCTCGCTGATGGTTGCAGAGAATGGCCACGACTCGCCCACCTGGCTCCACTaGCCTTCTGCGTCCTGCGCG +
Preference number: 4 (lower is better)
Translates to: LERTGGCSLMVAENGHDSPTWLH*PSASCA
Trigger: CGCGCAGGACGCAGAAGGGCAGTGGAGCCAGGTGGG...CGAGTCGTGGCCATTCTCTGCAACCATCAGCGAGCAACCCCCAGTACGTTCGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000518951.6
CDS-3UTR GCA 90 bp ATGGAGCCCTGCTCGGCCACAACCACGGGCTCAGGGTCCGTCCCTGTGTCTCCCCAGGACTTTCCGGGCTaGGGCCTTGTCCACAAAGTA +
Preference number: 4 (lower is better)
Translates to: MEPCSATTTGSGSVPVSPQDFPG*GLVHKV
Trigger: TACTTTGTGGACAAGGCCGCAGCCCGGAAAGTCCTG...GGGAGACACAGGGACGGACCCTGAGCCCGTGGTTGTGGCCGAGCAGGGCTCCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522121.5
CDS-3UTR GCA 90 bp TCCCGGGGCCGCCGGATGTGCCACCCACTCCTGTTCTGCTGCTTTGTGACACTGACAAAAGCCCAGGCTTaGGGGCACCAGCTCACGGTC +
Preference number: 4 (lower is better)
Translates to: SRGRRMCHPLLFCCFVTLTKAQA*GHQLTV
Trigger: GACCGTGAGCTGGTGCCCGCAAGCCTGGGCTTTTGT...CAGTGTCACAAAGCAGCAGAACAGGAGTGGGTGGCACATCCGGCGGCCCCGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000522121.5
CDS-3UTR CCA 90 bp AGCGGATCTCGTCCACAAATCCCCGCAGGCGTCGAGCTGTTTCAAACTTCTGCCGCCTCCGGGTGCAGCTaGACGTGCTCCACGCGGAGG +
Preference number: 4 (lower is better)
Translates to: SGSRPQIPAGVELFQTSAASGCS*TCSTRR
Trigger: CCTCCGCGTGGAGCACGTCCAGCTGCACCCGGAGGC...GGCAGAAGTTTGAAACAGCTCGACGCCTGCGGGGATTTGTGGACGAGATCCGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518951.6
CDS-3UTR TCA 90 bp GCCCGTCCATCAGCTCCTGGAGGTGCTTGTTCAGGCTGGTCGTCTGGGGAGGAAGCTGCTCCTGCAGAGTaGTGGAGGCGTTGTAGGTCC +
Preference number: 4 (lower is better)
Translates to: ARPSAPGGACSGWSSGEEAAPAE*WRRCRS
Trigger: GGACCTACAACGCCTCCATCACTCTGCAGGAGCAGC...TTCCTCCCCAGACGACCAGCCTGAACAAGCACCTCCAGGAGCTGATGGACGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518951.6
CDS-3UTR TCA 90 bp CTCTACTGGCACTTGCTGAGTAACCACCCACCCAGACGCCTGGTGGCTCACAGCTGGGGTCCAGGTAGTTaGGCTTGGACGTGCCCAGGG +
Preference number: 4 (lower is better)
Translates to: LYWHLLSNHPPRRLVAHSWGPGS*AWTCPG
Trigger: CCCTGGGCACGTCCAAGCTCAACTACCTGGACCCCA...GCTGTGAGCCACCAGGCGTCTGGGTGGGTGGTTACTCAGCAAGTGCCAGTAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519977.5
CDS-3UTR TCA 90 bp CCTCTTGCTCATGTGACCGTCCCGTGTGTGCTCCTGGAGAGGAGGCTCCGGTGTTCTCCACTGGCACCCTaGACCGCTTGCACCAGGCAA +
Preference number: 4 (lower is better)
Translates to: PLAHVTVPCVLLERRLRCSPLAP*TACTRQ
Trigger: TTGCCTGGTGCAAGCGGTTCAGGGTGCCAGTGGAGA...ACACCGGAGCCTCCTCTCCAGGAGCACACACGGGACGGTCACATGAGCAAGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519977.5
CDS-3UTR GCA 90 bp CGTGTGTGCTCCTGGAGAGGAGGCTCCGGTGTCTCTTCCCATGAGGGCACTCATTCCCCTTGGGCTTTGTaGTCAGCCCTCGCCCTCCTC +
Preference number: 4 (lower is better)
Translates to: RVCSWRGGSGVSSHEGTHSPWAL*SALALL
Trigger: GAGGAGGGCGAGGGCTGAGCACAAAGCCCAAGGGGA...ATGAGTGCCCTCATGGGAAGAGACACCGGAGCCTCCTCTCCAGGAGCACACACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519977.5
CDS-3UTR GCA 90 bp TGCTCATGTGACCGTCCCGTGTGTGCTCCTGGAGAGGAGGCTCCGGTGTCTCTTCCTGTTCCTCGGCTGTaGCCGGTTACTCAGGGCTGC +
Preference number: 4 (lower is better)
Translates to: CSCDRPVCAPGEEAPVSLPVPRL*PVTQGC
Trigger: GCAGCCCTGAGTAACCGGGCACAGCCGAGGAACAGG...AAGAGACACCGGAGCCTCCTCTCCAGGAGCACACACGGGACGGTCACATGAGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519977.5
CDS-3UTR GCA 90 bp GGAGCTCAGGTACGACACCATCTGTGCCAGGATGGAGCCCTGCTCGGCCACAACATGCCGGGCAGCTGGTaGCACCTCACAAAGCTGTCG +
Preference number: 4 (lower is better)
Translates to: GAQVRHHLCQDGALLGHNMPGSW*HLTKLS
Trigger: CGACAGCTTTGTGAGGTGGCACCAGCTGCCCGGCAT...GTTGTGGCCGAGCAGGGCTCCATCCTGGCACAGATGGTGTCGTACCTGAGCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522121.5
CDS-3UTR CCA 90 bp GCCCGTCCATCAGCTCCTGGAGGTGCTTGTTCAGGCTGGTCGTCTGGGGAGGAATCAGCATCCCCATCTTaGGATGGTCGCCACGGCCAC +
Preference number: 4 (lower is better)
Translates to: ARPSAPGGACSGWSSGEESASPS*DGRHGH
Trigger: GTGGCCGTGGCGACCATCCCAAGATGGGGATGCTGA...TTCCTCCCCAGACGACCAGCCTGAACAAGCACCTCCAGGAGCTGATGGACGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518951.6
CDS-3UTR CCA 90 bp TCTTGCTCATGTGACCGTCCCGTGTGTGCTCCTGGAGAGGAGGCTCCGGTGTCTCACCCAGACGCCTGGTaGCTCACAGCTGCAGGGACA +
Preference number: 4 (lower is better)
Translates to: SCSCDRPVCAPGEEAPVSHPDAW*LTAAGT
Trigger: TGTCCCTGCAGCTGTGAGCCACCAGGCGTCTGGGTG...AGACACCGGAGCCTCCTCTCCAGGAGCACACACGGGACGGTCACATGAGCAAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519977.5
CDS-3UTR TCA 90 bp CCATCGGCCTCCGGGTGCAGCTGGACGTGCTCCACGCGGAGGGAACAGCAGCCCCCTTTCGCCAGTCATTaGAGAAGTTCTTCCGGAAAA +
Preference number: 4 (lower is better)
Translates to: PSASGCSWTCSTRREQQPPFASH*RSSSGK
Trigger: TTTTCCGGAAGAACTTCTTCAATGACTGGCGAAAGG...GGGCTGCTGTTCCCTCCGCGTGGAGCACGTCCAGCTGCACCCGGAGGCCGATGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000518951.6
CDS-3UTR TCA 90 bp CACCAGCTCACGGTCCCAGTCCAGGCTCGGCCACTTAGGCCTGTGAGACCTCAGCCACATCCTCTGGCGTaGTCCTTCTCTTCAGCATCC +
Preference number: 4 (lower is better)
Translates to: HQLTVPVQARPLRPVRPQPHPLA*SFSSAS
Trigger: GGATGCTGAAGAGAAGGATCACGCCAGAGGATGTGG...CTGAGGTCTCACAGGCCTAAGTGGCCGAGCCTGGACTGGGACCGTGAGCTGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522121.5
CDS-3UTR TCA 90 bp CATGGACAAAAGCCCAGGCTTGCGGGCACCAGCTCACGGTCCCAGTCCAGGCTCCTCACAAAGCTGTCGTaGAAGGCAGAGGGGTGGCAT +
Preference number: 4 (lower is better)
Translates to: HGQKPRLAGTSSRSQSRLLTKLS*KAEGWH
Trigger: ATGCCACCCCTCTGCCTTTCACGACAGCTTTGTGAG...GAGCCTGGACTGGGACCGTGAGCTGGTGCCCGCAAGCCTGGGCTTTTGTCCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522121.5
CDS-3UTR GCA 90 bp GCTGCGGCCTTGTCCACAAAGTATCTGTGGATCTCCGTGAAGTCACACTTGTCCTGCCCTTCTGCGTCCTaGGCGAGCCCGGGACACCCC +
Preference number: 4 (lower is better)
Translates to: AAALSTKYLWISVKSHLSCPSAS*ASPGHP
Trigger: GGGGTGTCCCGGGCTCGCGCAGGACGCAGAAGGGCA...GGACAAGTGTGACTTCACGGAGATCCACAGATACTTTGTGGACAAGGCCGCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523417.5
CDS-3UTR GCA 90 bp CCGTCCATCAGCTCCTGGAGGTGCTTGTTCAGGCTGGTCGTCTGGGGAGGAAAAGGCGACCTCCTCCGCTaGCACGCTCAATCTCACAGG +
Preference number: 4 (lower is better)
Translates to: PSISSWRCLFRLVVWGGKGDLLR*HAQSHR
Trigger: CCTGTGAGATTGAGCGTGGCAGCGGAGGAGGTCGCC...TTTTCCTCCCCAGACGACCAGCCTGAACAAGCACCTCCAGGAGCTGATGGACGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518951.6
CDS-3UTR GCA 90 bp CGTCCATCAGCTCCTGGAGGTGCTTGTTCAGGCTGGTCGTCTGGGGAGGAAAATGGGTGCAGCTGGACGTaGTCCACGCGGAGGGAACAG +
Preference number: 4 (lower is better)
Translates to: RPSAPGGACSGWSSGEENGCSWT*STRREQ
Trigger: CTGTTCCCTCCGCGTGGAGCACGTCCAGCTGCACCC...ATTTTCCTCCCCAGACGACCAGCCTGAACAAGCACCTCCAGGAGCTGATGGACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518951.6
CDS-3UTR GCA 90 bp CTCGTCTTCATTTCCCGAGACTTCCAGTCAGCCCGGTACTGGGAGCGGATCTCGGCCCGCAGCTGCTCCTaGAGAGTGATGGAGGCGTTG +
Preference number: 4 (lower is better)
Translates to: LVFISRDFQSARYWERISARSCS*RVMEAL
Trigger: CAACGCCTCCATCACTCTGCAGGAGCAGCTGCGGGC...CGAGATCCGCTCCCAGTACCGGGCTGACTGGAAGTCTCGGGAAATGAAGACGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518951.6
CDS-3UTR CCA 90 bp GTCTCGTCTTCATTTCCCGAGACTTCCAGTCAGCCCGGTACTGGGAGCGGATCTGGGAAGGGGCTCGTATaGGGGTGCGAAGTACGGGCC +
Preference number: 4 (lower is better)
Translates to: VSSSFPETSSQPGTGSGSGKGLV*GCEVRA
Trigger: GGCCCGTACTTCGCACCCCCATACGAGCCCCTTCCC...AGATCCGCTCCCAGTACCGGGCTGACTGGAAGTCTCGGGAAATGAAGACGAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518951.6
CDS-3UTR CCA 90 bp CTTCTCCTCCCTGCTCAGGACTTTCCGGGCTGCGGCCTTGTCCACAAAGTATCTGGGAAGGGGCTCGTATaGGGGTGCGAAGTACGGGCC +
Preference number: 4 (lower is better)
Translates to: LLLPAQDFPGCGLVHKVSGKGLV*GCEVRA
Trigger: GGCCCGTACTTCGCACCCCCATACGAGCCCCTTCCC...AGATACTTTGTGGACAAGGCCGCAGCCCGGAAAGTCCTGAGCAGGGAGGAGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523417.5
CDS-3UTR CCA 90 bp CTTGTGAGGTCACAGGTGCAGAAGGAAGCCCGTCCGATGCAGACGGATGTTCCAACCCACCCAGACGCCTaGTGGCTCACAGCTGCAGGG +
Preference number: 4 (lower is better)
Translates to: LVRSQVQKEARPMQTDVPTHPDA*WLTAAG
Trigger: CCCTGCAGCTGTGAGCCACCAGGCGTCTGGGTGGGT...TGGAACATCCGTCTGCATCGGACGGGCTTCCTTCTGCACCTGTGACCTCACAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519977.5
3UTR CAA 72 bp AAAAACTCTGCACAGCCCATGGACAAAAGCCCAGGCTaGCGGGCACCAGCTCACGGTCCCAGTCCAGGCTCG +
Preference number: 4 (lower is better)
Translates to: KNSAQPMDKSPG*RAPAHGPSPGS
Trigger: CGAGCCTGGACTGGGACCGTGAGCTGGTGCCCGCAAGCCTGGGCTTTTGTCCATGGGCTGTGCAGAGTTTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000522121.5
CDS-3UTR GCA 90 bp GGTTGCTCGCTGATGGTTGCAGAGAATGGCCACGACTCGGTTGGCTCGGTTGTAGGGCTCGTATGGGGGTaGGAAGTACGGGCCCTTGTG +
Preference number: 4 (lower is better)
Translates to: GCSLMVAENGHDSVGSVVGLVWG*EVRALV
Trigger: CACAAGGGCCCGTACTTCGCACCCCCATACGAGCCC...TACAACCGAGCCAACCGAGTCGTGGCCATTCTCTGCAACCATCAGCGAGCAACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000518951.6
CDS-3UTR GCA 90 bp CACCAGCTCACGGTCCCAGTCCAGGCTCGGCCACTTAGGCCTGTGAGACCTCAGCACCCACTCCTGTTCTaGTGCTTTGTGACACTGCCT +
Preference number: 4 (lower is better)
Translates to: HQLTVPVQARPLRPVRPQHPLLF*CFVTLP
Trigger: AGGCAGTGTCACAAAGCAGCAGAACAGGAGTGGGTG...CTGAGGTCTCACAGGCCTAAGTGGCCGAGCCTGGACTGGGACCGTGAGCTGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522121.5
CDS-3UTR CCA 90 bp TGCTCATGTGACCGTCCCGTGTGTGCTCCTGGAGAGGAGGCTCCGGTGTCTCTTGACTTGCCATCCCCTTaGGCTTTGTGCTCAGCCCTC +
Preference number: 4 (lower is better)
Translates to: CSCDRPVCAPGEEAPVSLDLPSP*ALCSAL
Trigger: GAGGGCTGAGCACAAAGCCCAAGGGGATGGCAAGTC...AAGAGACACCGGAGCCTCCTCTCCAGGAGCACACACGGGACGGTCACATGAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519977.5
CDS-3UTR CCA 90 bp TGCTCATGTGACCGTCCCGTGTGTGCTCCTGGAGAGGAGGCTCCGGTGTCTCTTTCTCCAGGACACTCCTaGACTTGCCATCCCCTTGGG +
Preference number: 4 (lower is better)
Translates to: CSCDRPVCAPGEEAPVSLSPGHS*TCHPLG
Trigger: CCCAAGGGGATGGCAAGTCCAGGAGTGTCCTGGAGA...AAGAGACACCGGAGCCTCCTCTCCAGGAGCACACACGGGACGGTCACATGAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519977.5
CDS-3UTR CCA 90 bp AGGAAGCCCGTCCGATGCAGACGGATGTTCCAGCCAGGCGGAGAGGAGAAAATCAGTCTTCTCCTGCCATaGCGAGAGCCCAGGCGAACC +
Preference number: 4 (lower is better)
Translates to: RKPVRCRRMFQPGGEEKISLLLP*REPRRT
Trigger: GGTTCGCCTGGGCTCTCGCCATGGCAGGAGAAGACT...GATTTTCTCCTCTCCGCCTGGCTGGAACATCCGTCTGCATCGGACGGGCTTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519977.5
CDS-3UTR TCA 90 bp GGGAGCGGATCTCGTCCACAAATCCCCGCAGGCGTCGAGCTGTTTCAAACTTCTCTGGGGGTTGCTCGCTaGTGGTTGCAGAGAATGGCC +
Preference number: 4 (lower is better)
Translates to: GSGSRPQIPAGVELFQTSLGVAR*WLQRMA
Trigger: GGCCATTCTCTGCAACCATCAGCGAGCAACCCCCAG...AGAAGTTTGAAACAGCTCGACGCCTGCGGGGATTTGTGGACGAGATCCGCTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000518951.6
CDS-3UTR TCA 90 bp CCCGTCCGATGCAGACGGATGTTCCAGCCAGGCGGAGAGGAGAAAATCAGTACCTGCACCAGGCAATGCTaGTCCTGGGGTCCAGGTAGT +
Preference number: 4 (lower is better)
Translates to: PVRCRRMFQPGGEEKISTCTRQC*SWGPGS
Trigger: ACTACCTGGACCCCAGGATCAGCATTGCCTGGTGCA...GGTACTGATTTTCTCCTCTCCGCCTGGCTGGAACATCCGTCTGCATCGGACGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519977.5
CDS-3UTR GCA 90 bp CTCCGTGAAGTCACACTTGTCCAGGCTCTTGATGACTTCCCTCTCTTCCACCGCGGGCTCGTATGGGGGTaGGAAGTACGGGCCCTTGTG +
Preference number: 4 (lower is better)
Translates to: LREVTLVQALDDFPLFHRGLVWG*EVRALV
Trigger: CACAAGGGCCCGTACTTCGCACCCCCATACGAGCCC...GCGGTGGAAGAGAGGGAAGTCATCAAGAGCCTGGACAAGTGTGACTTCACGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000523417.5
CDS-3UTR GCA 90 bp AGAGCTGTAAGTTCTTGTACACCGGCTTCTCCACCGGCACTCTGTTGTAGTAGCCCATCGGCCTCCGGGTaGAGCTGGACGTGCTCCACG +
Preference number: 4 (lower is better)
Translates to: RAVSSCTPASPPALCCSSPSASG*SWTCST
Trigger: CGTGGAGCACGTCCAGCTGCACCCGGAGGCCGATGG...GCTACTACAACAGAGTGCCGGTGGAGAAGCCGGTGTACAAGAACTTACAGCTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518951.6
CDS-3UTR GCA 90 bp CTCTACTGGCACTTGCTGAGTAACCACCCACCCAGACGCCTGGTGGCTCACAGCGGACACTCCTGGACTTaGCATCCCCTTGGGCTTTGT +
Preference number: 4 (lower is better)
Translates to: LYWHLLSNHPPRRLVAHSGHSWT*HPLGLC
Trigger: ACAAAGCCCAAGGGGATGGCAAGTCCAGGAGTGTCC...GCTGTGAGCCACCAGGCGTCTGGGTGGGTGGTTACTCAGCAAGTGCCAGTAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519977.5
CDS-3UTR GCA 90 bp CGCCGGATGTGCCACCCACTCCTGTTCTGCTGCTTTGTGACACTGCCTCCCTTCCCACTCCTGTTCTGCTaGTTTGTGACACTGCCTCCC +
Preference number: 4 (lower is better)
Translates to: RRMCHPLLFCCFVTLPPFPLLFC*FVTLPP
Trigger: GGGAGGCAGTGTCACAAAGCAGCAGAACAGGAGTGG...GAAGGGAGGCAGTGTCACAAAGCAGCAGAACAGGAGTGGGTGGCACATCCGGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522121.5
CDS-3UTR CCA 90 bp GCGGATCTCGTCCACAAATCCCCGCAGGCGTCGAGCTGTTTCAAACTTCTGCCATCTCCTTCTCCCACCTaGCTCCACTGCCCTTCTGCG +
Preference number: 4 (lower is better)
Translates to: ADLVHKSPQASSCFKLLPSPSPT*LHCPSA
Trigger: CGCAGAAGGGCAGTGGAGCCAGGTGGGAGAAGGAGA...TGGCAGAAGTTTGAAACAGCTCGACGCCTGCGGGGATTTGTGGACGAGATCCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518951.6
CDS-3UTR CCA 90 bp GCTCAGGACTTTCCGGGCTGCGGCCTTGTCCACAAAGTATCTGTGGATCTCCGTTCTCCTTCTCCCACCTaGCTCCACTGCCCTTCTGCG +
Preference number: 4 (lower is better)
Translates to: AQDFPGCGLVHKVSVDLRSPSPT*LHCPSA
Trigger: CGCAGAAGGGCAGTGGAGCCAGGTGGGAGAAGGAGA...ACGGAGATCCACAGATACTTTGTGGACAAGGCCGCAGCCCGGAAAGTCCTGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523417.5
CDS-3UTR CCA 90 bp GTCTCGTCTTCATTTCCCGAGACTTCCAGTCAGCCCGGTACTGGGAGCGGATCTCAGTCAGCCCGGTACTaGGAGCGGATCTCGTCCACA +
Preference number: 4 (lower is better)
Translates to: VSSSFPETSSQPGTGSGSQSARY*ERISST
Trigger: TGTGGACGAGATCCGCTCCCAGTACCGGGCTGACTG...AGATCCGCTCCCAGTACCGGGCTGACTGGAAGTCTCGGGAAATGAAGACGAGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518951.6
CDS-3UTR CCA 90 bp GGGAGCGGATCTCGTCCACAAATCCCCGCAGGCGTCGAGCTGTTTCAAACTTCTAATTCCACCACGTGTTaGCAGCCATCGGCCTCCGGG +
Preference number: 4 (lower is better)
Translates to: GSGSRPQIPAGVELFQTSNSTTC*QPSASG
Trigger: CCCGGAGGCCGATGGCTGCCAACACGTGGTGGAATT...AGAAGTTTGAAACAGCTCGACGCCTGCGGGGATTTGTGGACGAGATCCGCTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518951.6
CDS-3UTR CCA 90 bp GTCCCAGCTTACGGTCAGCCTGTCGAAGAGGTCGTCCCGGGGGTCCTTGTTCTCGGTGCTTGTTCAGGCTaGTCGTCTGGGGAGGAAAAT +
Preference number: 4 (lower is better)
Translates to: VPAYGQPVEEVVPGVLVLGACSG*SSGEEN
Trigger: ATTTTCCTCCCCAGACGACCAGCCTGAACAAGCACC...GAGAACAAGGACCCCCGGGACGACCTCTTCGACAGGCTGACCGTAAGCTGGGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000518951.6
CDS-3UTR TCA 90 bp CCGTCCATCAGCTCCTGGAGGTGCTTGTTCAGGCTGGTCGTCTGGGGAGGAAAACCACATCCTCTGGCGTaGTCCTTCTCTTCAGCATCC +
Preference number: 4 (lower is better)
Translates to: PSISSWRCLFRLVVWGGKPHPLA*SFSSAS
Trigger: GGATGCTGAAGAGAAGGATCACGCCAGAGGATGTGG...TTTTCCTCCCCAGACGACCAGCCTGAACAAGCACCTCCAGGAGCTGATGGACGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518951.6
CDS-3UTR TCA 90 bp AACAAAAACTCTGCACAGCCCATGGACAAAAGCCCAGGCTTGCGGGCACCAGCTGGCCACTTAGGCCTGTaGGACCTCAGGAGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: NKNSAQPMDKSPGLRAPAGHLGL*DLRSCC
Trigger: ACAGCAGCTCCTGAGGTCTCACAGGCCTAAGTGGCC...AGCTGGTGCCCGCAAGCCTGGGCTTTTGTCCATGGGCTGTGCAGAGTTTTTGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000522121.5
CDS-3UTR GCA 90 bp CCGTCCATCAGCTCCTGGAGGTGCTTGTTCAGGCTGGTCGTCTGGGGAGGAAAAGAACGTACTGGGGGTTaGTCGCTGATGGTTGCAGAG +
Preference number: 4 (lower is better)
Translates to: PSISSWRCLFRLVVWGGKERTGG*SLMVAE
Trigger: CTCTGCAACCATCAGCGAGCAACCCCCAGTACGTTC...TTTTCCTCCCCAGACGACCAGCCTGAACAAGCACCTCCAGGAGCTGATGGACGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000518951.6
CDS-3UTR GCA 90 bp CTCGAACGTACTGGGGGTTGCTCGCTGATGGTTGCAGAGAATGGCCACGACTCGATCAGCTCCTGGAGGTaGTTGTTCAGGCTGGTCGTC +
Preference number: 4 (lower is better)
Translates to: LERTGGCSLMVAENGHDSISSWR*LFRLVV
Trigger: GACGACCAGCCTGAACAAGCACCTCCAGGAGCTGAT...CGAGTCGTGGCCATTCTCTGCAACCATCAGCGAGCAACCCCCAGTACGTTCGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000518951.6
CDS-3UTR TCA 90 bp GCTGTCTCCCCCTTCAGCTTCGAGCAAGGGTTCAGCATGATGTACTTGATGGAGAAGCTGCCAGCCACGTaGCGGTGTTATCGGAGCGCA +
Preference number: 4 (lower is better)
Translates to: AVSPFSFEQGFSMMYLMEKLPAT*RCYRSA
Trigger: TGCGCTCCGATAACACCGTCACGTGGCTGGCAGCTT...CTCCATCAAGTACATCATGCTGAACCCTTGCTCGAAGCTGAAGGGGGAGACAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000518951.6
CDS-3UTR TCA 90 bp AGGAAGCCCGTCCGATGCAGACGGATGTTCCAGCCAGGCGGAGAGGAGAAAATCCATGTGAACTGGAGGTaGGGGACAAGTATCCAGTCC +
Preference number: 4 (lower is better)
Translates to: RKPVRCRRMFQPGGEEKIHVNWR*GTSIQS
Trigger: GGACTGGATACTTGTCCCTCACCTCCAGTTCACATG...GATTTTCTCCTCTCCGCCTGGCTGGAACATCCGTCTGCATCGGACGGGCTTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519977.5
CDS-3UTR TCA 90 bp CACAGGTGCAGAAGGAAGCCCGTCCGATGCAGACGGATGTTCCAGCCAGGCGGAGAGGACTTTAACATGTaGACTGGAGGTGAGGGACAA +
Preference number: 4 (lower is better)
Translates to: HRCRRKPVRCRRMFQPGGEDFNM*TGGEGQ
Trigger: TTGTCCCTCACCTCCAGTTCACATGTTAAAGTCCTC...TCCGCCTGGCTGGAACATCCGTCTGCATCGGACGGGCTTCCTTCTGCACCTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519977.5
CDS-3UTR GCA 90 bp GTCTCGTCTTCATTTCCCGAGACTTCCAGTCAGCCCGGTACTGGGAGCGGATCTTTCACCCCGTCTTCGTaGTTCTCCTTCTCCCACCTG +
Preference number: 4 (lower is better)
Translates to: VSSSFPETSSQPGTGSGSFTPSS*FSFSHL
Trigger: CAGGTGGGAGAAGGAGAAGCACGAAGACGGGGTGAA...AGATCCGCTCCCAGTACCGGGCTGACTGGAAGTCTCGGGAAATGAAGACGAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518951.6
CDS-3UTR GCA 90 bp TGCGGCCTTGTCCACAAAGTATCTGTGGATCTCCGTGAAGTCACACTTGTCCAGGGCGACCTCCTCCGCTaGCACGCTCAATCTCACAGG +
Preference number: 4 (lower is better)
Translates to: CGLVHKVSVDLREVTLVQGDLLR*HAQSHR
Trigger: CCTGTGAGATTGAGCGTGGCAGCGGAGGAGGTCGCC...CTGGACAAGTGTGACTTCACGGAGATCCACAGATACTTTGTGGACAAGGCCGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523417.5
CDS-3UTR GCA 90 bp ATCCCCGCAGGCGTCGAGCTGTTTCAAACTTCTGCCAAGCTGTCTCCCCCTTCACAGGACTTTCCGGGCTaGGGCCTTGTCCACAAAGTA +
Preference number: 4 (lower is better)
Translates to: IPAGVELFQTSAKLSPPSQDFPG*GLVHKV
Trigger: TACTTTGTGGACAAGGCCGCAGCCCGGAAAGTCCTG...TGAAGGGGGAGACAGCTTGGCAGAAGTTTGAAACAGCTCGACGCCTGCGGGGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000518951.6
CDS-3UTR CCA 90 bp GGGAGCGGATCTCGTCCACAAATCCCCGCAGGCGTCGAGCTGTTTCAAACTTCTTCCTCCCATAAAAAGTaGCGACCTCCTCCGCTGCCA +
Preference number: 4 (lower is better)
Translates to: GSGSRPQIPAGVELFQTSSSHKK*RPPPLP
Trigger: TGGCAGCGGAGGAGGTCGCCACTTTTTATGGGAGGA...AGAAGTTTGAAACAGCTCGACGCCTGCGGGGATTTGTGGACGAGATCCGCTCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000518951.6
CDS-3UTR TCA 90 bp GAGCTCAGGTACGACACCATCTGTGCCAGGATGGAGCCCTGCTCGGCCACAACCCCTTTCGCCAGTCATTaGAGAAGTTCTTCCGGAAAA +
Preference number: 4 (lower is better)
Translates to: ELRYDTICARMEPCSATTPFASH*RSSSGK
Trigger: TTTTCCGGAAGAACTTCTTCAATGACTGGCGAAAGG...GGTTGTGGCCGAGCAGGGCTCCATCCTGGCACAGATGGTGTCGTACCTGAGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522121.5
CDS-3UTR TCA 90 bp CGTCCGATGCAGACGGATGTTCCAGCCAGGCGGAGAGGAGAAAATCAGTACCTATCTACTGGCACTTGCTaGGTAACCACCCACCCAGAC +
Preference number: 4 (lower is better)
Translates to: RPMQTDVPARRRGENQYLSTGTC*VTTHPD
Trigger: GTCTGGGTGGGTGGTTACTCAGCAAGTGCCAGTAGA...TAGGTACTGATTTTCTCCTCTCCGCCTGGCTGGAACATCCGTCTGCATCGGACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519977.5
CDS-3UTR TCA 90 bp TGCGGCCTTGTCCACAAAGTATCTGTGGATCTCCGTGAAGTCACACTTGTCCAGTCCACCGCCATTTCCTaGGGGAGAGCCGCAGATCAC +
Preference number: 4 (lower is better)
Translates to: CGLVHKVSVDLREVTLVQSTAIS*GRAADH
Trigger: GTGATCTGCGGCTCTCCCTCAGGAAATGGCGGTGGA...CTGGACAAGTGTGACTTCACGGAGATCCACAGATACTTTGTGGACAAGGCCGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522121.5
CDS-3UTR GCA 90 bp TTCCGGGCTGCGGCCTTGTCCACAAAGTATCTGTGGATCTCCGTGAAGTCACACTTCACCCCGTCTTCGTaGTTCTCCTTCTCCCACCTG +
Preference number: 4 (lower is better)
Translates to: FRAAALSTKYLWISVKSHFTPSS*FSFSHL
Trigger: CAGGTGGGAGAAGGAGAAGCACGAAGACGGGGTGAA...GTGTGACTTCACGGAGATCCACAGATACTTTGTGGACAAGGCCGCAGCCCGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523417.5
CDS-3UTR GCA 90 bp ACTTTAACATGTGAACTGGAGGTGAGGGACAAGTATCCAGTCCACAGCAACCCCTCCTTGTCCGTGGCCTaGACACTCAGCTGCGCCAGC +
Preference number: 4 (lower is better)
Translates to: TLTCELEVRDKYPVHSNPSLSVA*TLSCAS
Trigger: GCTGGCGCAGCTGAGTGTGCAGGCCACGGACAAGGA...GGGGTTGCTGTGGACTGGATACTTGTCCCTCACCTCCAGTTCACATGTTAAAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519977.5
CDS-3UTR GCA 90 bp TGCTCATGTGACCGTCCCGTGTGTGCTCCTGGAGAGGAGGCTCCGGTGTCTCTTTCTCCCGCTGTGTTTTaGTGTAGATCTTCTCCACTG +
Preference number: 4 (lower is better)
Translates to: CSCDRPVCAPGEEAPVSLSPAVF*CRSSPL
Trigger: CAGTGGAGAAGATCTACAGCAAAACACAGCGGGAGA...AAGAGACACCGGAGCCTCCTCTCCAGGAGCACACACGGGACGGTCACATGAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519977.5
CDS-3UTR GCA 90 bp GGGACAAGTATCCAGTCCACAGCAACCCCAACTCTGGGACCCAGTTTCTCTACTAGGAAGCCCGTCCGATaGAGACGGATGTTCCAGCCA +
Preference number: 4 (lower is better)
Translates to: GTSIQSTATPTLGPSFSTRKPVR*RRMFQP
Trigger: TGGCTGGAACATCCGTCTGCATCGGACGGGCTTCCT...AGTAGAGAAACTGGGTCCCAGAGTTGGGGTTGCTGTGGACTGGATACTTGTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519977.5
CDS-3UTR CCA 90 bp GGAGCTCAGGTACGACACCATCTGTGCCAGGATGGAGCCCTGCTCGGCCACAACTCCACAAAGTATCTGTaGATCTCCGTGAAGTCACAC +
Preference number: 4 (lower is better)
Translates to: GAQVRHHLCQDGALLGHNSTKYL*ISVKSH
Trigger: GTGTGACTTCACGGAGATCCACAGATACTTTGTGGA...GTTGTGGCCGAGCAGGGCTCCATCCTGGCACAGATGGTGTCGTACCTGAGCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522121.5
CDS-3UTR CCA 90 bp GAGGGAGAGCCGCAGATCACAGGCAACTGTTTCTCCTTTCGTTTCCTACACAACTCAGCATCCCCATCTTaGGATGGTCGCCACGGCCAC +
Preference number: 4 (lower is better)
Translates to: EGEPQITGNCFSFRFLHNSASPS*DGRHGH
Trigger: GTGGCCGTGGCGACCATCCCAAGATGGGGATGCTGA...GTTGTGTAGGAAACGAAAGGAGAAACAGTTGCCTGTGATCTGCGGCTCTCCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522121.5
CDS-3UTR CCA 90 bp GATCTTCGAGTCCCTGCTGCAGTTGATAACCACATCCTCTGGCGTGATCCTTCTAGGTCCGGAACACCTTaGCCGTCAGCCCGTCCATCA +
Preference number: 4 (lower is better)
Translates to: DLRVPAAVDNHILWRDPSRSGTP*PSARPS
Trigger: TGATGGACGGGCTGACGGCCAAGGTGTTCCGGACCT...AGAAGGATCACGCCAGAGGATGTGGTTATCAACTGCAGCAGGGACTCGAAGATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518951.6
CDS-3UTR CCA 90 bp GCGGATCTCGTCCACAAATCCCCGCAGGCGTCGAGCTGTTTCAAACTTCTGCCATGGCCACGACTCGGTTaGCTCGGTTGTAGGATAAGA +
Preference number: 4 (lower is better)
Translates to: ADLVHKSPQASSCFKLLPWPRLG*LGCRIR
Trigger: TCTTATCCTACAACCGAGCCAACCGAGTCGTGGCCA...TGGCAGAAGTTTGAAACAGCTCGACGCCTGCGGGGATTTGTGGACGAGATCCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518951.6
CDS-3UTR CCA 90 bp GATGCAGACGGATGTTCCAGCCAGGCGGAGAGGAGAAAATCAGTACCTAAAGCATCTCCTCCTTGTCCGTaGCCTGCACACTCAGCTGCG +
Preference number: 4 (lower is better)
Translates to: DADGCSSQAERRKSVPKASPPCP*PAHSAA
Trigger: CGCAGCTGAGTGTGCAGGCCACGGACAAGGAGGAGA...TGCTTTAGGTACTGATTTTCTCCTCTCCGCCTGGCTGGAACATCCGTCTGCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519977.5
CDS-3UTR CCA 90 bp CTTGTGAGGTCACAGGTGCAGAAGGAAGCCCGTCCGATGCAGACGGATGTTCCAGTAGATCTTCTCCACTaGCACCCTGAACCGCTTGCA +
Preference number: 4 (lower is better)
Translates to: LVRSQVQKEARPMQTDVPVDLLH*HPEPLA
Trigger: TGCAAGCGGTTCAGGGTGCCAGTGGAGAAGATCTAC...TGGAACATCCGTCTGCATCGGACGGGCTTCCTTCTGCACCTGTGACCTCACAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519977.5
CDS-3UTR CCA 90 bp GATGCAGACGGATGTTCCAGCCAGGCGGAGAGGAGAAAATCAGTACCTAAAGCATACTCAGGGCTGCTCTaGTCCTGCCTCCCCAAGGAG +
Preference number: 4 (lower is better)
Translates to: DADGCSSQAERRKSVPKAYSGLL*SCLPKE
Trigger: CTCCTTGGGGAGGCAGGACCAGAGCAGCCCTGAGTA...TGCTTTAGGTACTGATTTTCTCCTCTCCGCCTGGCTGGAACATCCGTCTGCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519977.5
3UTR CAA 72 bp TTCTCCTCCCTGCTCAGGACTTTCCGGGCTGCGGCCTaGTCCACAAAGTATCTGTGGATCTCCGTGAAGTCA +
Preference number: 4 (lower is better)
Translates to: FSSLLRTFRAAA*STKYLWISVKS
Trigger: TGACTTCACGGAGATCCACAGATACTTTGTGGACAAGGCCGCAGCCCGGAAAGTCCTGAGCAGGGAGGAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522121.5
ENST00000523417.5
3UTR CAA 72 bp GGAGATTCTGCATCGACTTCTCGAACGTACTGGGGGTaGCTCGCTGATGGTTGCAGAGAATGGCCACGACTC +
Preference number: 4 (lower is better)
Translates to: GDSASTSRTYWG*LADGCREWPRL
Trigger: GAGTCGTGGCCATTCTCTGCAACCATCAGCGAGCAACCCCCAGTACGTTCGAGAAGTCGATGCAGAATCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000518951.6
CDS-3UTR TCA 90 bp ATCCCCGCAGGCGTCGAGCTGTTTCAAACTTCTGCCAAGCTGTCTCCCCCTTCATACTTGATGGAGTTCTaGACGCTCTCGGTCCAAGCT +
Preference number: 4 (lower is better)
Translates to: IPAGVELFQTSAKLSPPSYLMEF*TLSVQA
Trigger: AGCTTGGACCGAGAGCGTTCAGAACTCCATCAAGTA...TGAAGGGGGAGACAGCTTGGCAGAAGTTTGAAACAGCTCGACGCCTGCGGGGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000518951.6
CDS-3UTR GCA 90 bp GCGGATCTCGTCCACAAATCCCCGCAGGCGTCGAGCTGTTTCAAACTTCTGCCAGCTGTTTCAAACTTCTaGCAAGCTGTCTCCCCCTTC +
Preference number: 4 (lower is better)
Translates to: ADLVHKSPQASSCFKLLPAVSNF*QAVSPF
Trigger: GAAGGGGGAGACAGCTTGGCAGAAGTTTGAAACAGC...TGGCAGAAGTTTGAAACAGCTCGACGCCTGCGGGGATTTGTGGACGAGATCCGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000518951.6
CDS-3UTR GCA 90 bp AGCGGATCTCGTCCACAAATCCCCGCAGGCGTCGAGCTGTTTCAAACTTCTGCCATAATTACGTGGTTTTaGGGGGCCGTCCCAGCTTAC +
Preference number: 4 (lower is better)
Translates to: SGSRPQIPAGVELFQTSAIITWF*GAVPAY
Trigger: GTAAGCTGGGACGGCCCCGCAAAACCACGTAATTAT...GGCAGAAGTTTGAAACAGCTCGACGCCTGCGGGGATTTGTGGACGAGATCCGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000518951.6
CDS-3UTR CCA 90 bp ATCCCCGCAGGCGTCGAGCTGTTTCAAACTTCTGCCAAGCTGTCTCCCCCTTCAGTCTCTATAATTACGTaGTTTTGCGGGGCCGTCCCA +
Preference number: 4 (lower is better)
Translates to: IPAGVELFQTSAKLSPPSVSIIT*FCGAVP
Trigger: TGGGACGGCCCCGCAAAACCACGTAATTATAGAGAC...TGAAGGGGGAGACAGCTTGGCAGAAGTTTGAAACAGCTCGACGCCTGCGGGGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000518951.6
CDS-3UTR TCA 90 bp GCTGCGGCCTTGTCCACAAAGTATCTGTGGATCTCCGTGAAGTCACACTTGTCCATCTGTGGATCTCCGTaGAGTCACACTTGTCCAGGC +
Preference number: 4 (lower is better)
Translates to: AAALSTKYLWISVKSHLSICGSP*SHTCPG
Trigger: GCCTGGACAAGTGTGACTTCACGGAGATCCACAGAT...GGACAAGTGTGACTTCACGGAGATCCACAGATACTTTGTGGACAAGGCCGCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522121.5
ENST00000523417.5
CDS-3UTR TCA 90 bp CTCCGTGAAGTCACACTTGTCCAGGCTCTTGATGACTTCCCTCTCTTCCACCGCGCAAAGTCTGGGAGATaGCATTCACAGCATGTGCGT +
Preference number: 4 (lower is better)
Translates to: LREVTLVQALDDFPLFHRAKSGR*HSQHVR
Trigger: ACGCACATGCTGTGAATGTCATCTCCCAGACTTTGC...GCGGTGGAAGAGAGGGAAGTCATCAAGAGCCTGGACAAGTGTGACTTCACGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523417.5
CDS-3UTR GCA 90 bp CTCTCTTCCACCGCCATTTCCATAAAAGACAGATTGATAAACGGCATAACTAAGGCTCCACTGCCCTTCTaGGTCCTGCGCGAGCCCGGG +
Preference number: 4 (lower is better)
Translates to: LSSTAISIKDRLINGITKAPLPF*VLREPG
Trigger: CCCGGGCTCGCGCAGGACGCAGAAGGGCAGTGGAGC...CTTAGTTATGCCGTTTATCAATCTGTCTTTTATGGAAATGGCGGTGGAAGAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523417.5
CDS-3UTR GCA 90 bp GATCTCCGTGAAGTCACACTTGTCCAGGCTCTTGATGACTTCCCTCTCTTCCACCAGGACTTTCCGGGCTaGGGCCTTGTCCACAAAGTA +
Preference number: 4 (lower is better)
Translates to: DLREVTLVQALDDFPLFHQDFPG*GLVHKV
Trigger: TACTTTGTGGACAAGGCCGCAGCCCGGAAAGTCCTG...GTGGAAGAGAGGGAAGTCATCAAGAGCCTGGACAAGTGTGACTTCACGGAGATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522121.5
ENST00000523417.5
CDS-3UTR GCA 90 bp GGTTGCTCGCTGATGGTTGCAGAGAATGGCCACGACTCGGTTGGCTCGGTTGTACTCCTTCTCATTTCCTaGTCTCAGTGCCAGCTTATC +
Preference number: 4 (lower is better)
Translates to: GCSLMVAENGHDSVGSVVLLLIS*SQCQLI
Trigger: GATAAGCTGGCACTGAGAGCAGGAAATGAGAAGGAG...TACAACCGAGCCAACCGAGTCGTGGCCATTCTCTGCAACCATCAGCGAGCAACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518951.6
CDS-3UTR GCA 90 bp AACACTGTCTTGCTGGGGGTGAGGACTTTAACATGTGAACTGGAGGTGAGGGACTTCAAAGTCTTCTCCTaGCATGGCGAGAGCCCAGGC +
Preference number: 4 (lower is better)
Translates to: NTVLLGVRTLTCELEVRDFKVFS*HGESPG
Trigger: GCCTGGGCTCTCGCCATGGCAGGAGAAGACTTTGAA...GTCCCTCACCTCCAGTTCACATGTTAAAGTCCTCACCCCCAGCAAGACAGTGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000519977.5
CDS-3UTR GCA 90 bp GCTGTCTCCCCCTTCAGCTTCGAGCAAGGGTTCAGCATGATGTACTTGATGGAGTTCTTGGTGACCATCTaGTTCTCCTCCCTGCTCAGG +
Preference number: 4 (lower is better)
Translates to: AVSPFSFEQGFSMMYLMEFLVTI*FSSLLR
Trigger: CCTGAGCAGGGAGGAGAAGCAGATGGTCACCAAGAA...CTCCATCAAGTACATCATGCTGAACCCTTGCTCGAAGCTGAAGGGGGAGACAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000518951.6
CDS-3UTR GCA 90 bp TTTCTCCTTTCGTTTCCTACACAACAAAAACTCTGCACAGCCCATGGACAAAAGCGGGGCCGCCGGATGTaGCACCCACTCCTGTTCTGC +
Preference number: 4 (lower is better)
Translates to: FLLSFPTQQKLCTAHGQKRGRRM*HPLLFC
Trigger: GCAGAACAGGAGTGGGTGGCACATCCGGCGGCCCCG...CTTTTGTCCATGGGCTGTGCAGAGTTTTTGTTGTGTAGGAAACGAAAGGAGAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000522121.5
CDS-3UTR CCA 90 bp AGCGGATCTCGTCCACAAATCCCCGCAGGCGTCGAGCTGTTTCAAACTTCTGCCGATAACCACATCCTCTaGCGTGATCCTTCTCTTCAG +
Preference number: 4 (lower is better)
Translates to: SGSRPQIPAGVELFQTSADNHIL*RDPSLQ
Trigger: CTGAAGAGAAGGATCACGCCAGAGGATGTGGTTATC...GGCAGAAGTTTGAAACAGCTCGACGCCTGCGGGGATTTGTGGACGAGATCCGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518951.6
CDS-3UTR CCA 90 bp GATCTTCGAGTCCCTGCTGCAGTTGATAACCACATCCTCTGGCGTGATCCTTCTGATGGTTGCAGAGAATaGCCACGACTCGGTTGGCTC +
Preference number: 4 (lower is better)
Translates to: DLRVPAAVDNHILWRDPSDGCRE*PRLGWL
Trigger: GAGCCAACCGAGTCGTGGCCATTCTCTGCAACCATC...AGAAGGATCACGCCAGAGGATGTGGTTATCAACTGCAGCAGGGACTCGAAGATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518951.6
CDS-3UTR CCA 90 bp GGCCTTGTCCACAAAGTATCTGTGGATCTCCGTGAAGTCACACTTGTCCAGGCTAAACGTGTCTCGCTGTaGGATGGGGATGATCCGCCT +
Preference number: 4 (lower is better)
Translates to: GLVHKVSVDLREVTLVQAKRVSL*DGDDPP
Trigger: AGGCGGATCATCCCCATCCCACAGCGAGACACGTTT...AGCCTGGACAAGTGTGACTTCACGGAGATCCACAGATACTTTGTGGACAAGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522121.5
CDS-3UTR TCA 90 bp AGAGCTGTAAGTTCTTGTACACCGGCTTCTCCACCGGCACTCTGTTGTAGTAGCATCTGTGGATCTCCGTaGAGTCACACTTGTCCAGGC +
Preference number: 4 (lower is better)
Translates to: RAVSSCTPASPPALCCSSICGSP*SHTCPG
Trigger: GCCTGGACAAGTGTGACTTCACGGAGATCCACAGAT...GCTACTACAACAGAGTGCCGGTGGAGAAGCCGGTGTACAAGAACTTACAGCTCT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518951.6
CDS-3UTR GCA 90 bp GTTCCAGCCAGGCGGAGAGGAGAAAATCAGTACCTAAAGCATAAAAGAAGTTTCCTCAGCTGCGCCAGCTaGTCCTGCAGCTTCTCCAGG +
Preference number: 4 (lower is better)
Translates to: VPARRRGENQYLKHKRSFLSCAS*SCSFSR
Trigger: CCTGGAGAAGCTGCAGGAGCAGCTGGCGCAGCTGAG...GAAACTTCTTTTATGCTTTAGGTACTGATTTTCTCCTCTCCGCCTGGCTGGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519977.5
CDS-3UTR GCA 90 bp TGTGGGATGGGGATGATCCGCCTCTTCCGAGGAGCTCAGGTACGACACCATCTGACACAACAAAAACTCTaGACAGCCCATGGACAAAAG +
Preference number: 4 (lower is better)
Translates to: CGMGMIRLFRGAQVRHHLTQQKL*TAHGQK
Trigger: CTTTTGTCCATGGGCTGTGCAGAGTTTTTGTTGTGT...CAGATGGTGTCGTACCTGAGCTCCTCGGAAGAGGCGGATCATCCCCATCCCACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000522121.5
CDS-3UTR CCA 90 bp AGAGCTGTAAGTTCTTGTACACCGGCTTCTCCACCGGCACTCTGTTGTAGTAGCACTTCTCGAACGTACTaGGGGTTGCTCGCTGATGGT +
Preference number: 4 (lower is better)
Translates to: RAVSSCTPASPPALCCSSTSRTY*GLLADG
Trigger: ACCATCAGCGAGCAACCCCCAGTACGTTCGAGAAGT...GCTACTACAACAGAGTGCCGGTGGAGAAGCCGGTGTACAAGAACTTACAGCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518951.6
CDS-3UTR CCA 90 bp ACCTCCAACACTGTCTTGCTGGGGGTGAGGACTTTAACATGTGAACTGGAGGTGCAGCAACCCCAACTCTaGGACCCAGTTTCTCTACTG +
Preference number: 4 (lower is better)
Translates to: TSNTVLLGVRTLTCELEVQQPQL*DPVSLL
Trigger: CAGTAGAGAAACTGGGTCCCAGAGTTGGGGTTGCTG...CACCTCCAGTTCACATGTTAAAGTCCTCACCCCCAGCAAGACAGTGTTGGAGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000519977.5
CDS-3UTR TCA 90 bp TTCCGGGCTGCGGCCTTGTCCACAAAGTATCTGTGGATCTCCGTGAAGTCACACCCTTTCGCCAGTCATTaGAGAAGTTCTTCCGGAAAA +
Preference number: 4 (lower is better)
Translates to: FRAAALSTKYLWISVKSHPFASH*RSSSGK
Trigger: TTTTCCGGAAGAACTTCTTCAATGACTGGCGAAAGG...GTGTGACTTCACGGAGATCCACAGATACTTTGTGGACAAGGCCGCAGCCCGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522121.5
ENST00000523417.5
CDS-3UTR TCA 90 bp GCCTTGTCCACAAAGTATCTGTGGATCTCCGTGAAGTCACACTTGTCCAGGCTCGACCTCACTGAGAAGTaGAAAGGCAAAGTCTGGGAG +
Preference number: 4 (lower is better)
Translates to: ALSTKYLWISVKSHLSRLDLTEK*KGKVWE
Trigger: CTCCCAGACTTTGCCTTTTCACTTCTCAGTGAGGTC...GAGCCTGGACAAGTGTGACTTCACGGAGATCCACAGATACTTTGTGGACAAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523417.5
CDS-3UTR GCA 90 bp CGTGAAGTCACACTTGTCCAGGCTCTTGATGACTTCCCTCTCTTCCACCGCCATTCTTCTTTTAGCTTCTaGTTCTCCTCCCTGCTCAGG +
Preference number: 4 (lower is better)
Translates to: REVTLVQALDDFPLFHRHSSFSF*FSSLLR
Trigger: CCTGAGCAGGGAGGAGAAGCAGAAGCTAAAAGAAGA...ATGGCGGTGGAAGAGAGGGAAGTCATCAAGAGCCTGGACAAGTGTGACTTCACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000522121.5
ENST00000523417.5
CDS-3UTR CCA 90 bp GCTGCGGCCTTGTCCACAAAGTATCTGTGGATCTCCGTGAAGTCACACTTGTCCGATAACCACATCCTCTaGCGTGATCCTTCTCTTCAG +
Preference number: 4 (lower is better)
Translates to: AAALSTKYLWISVKSHLSDNHIL*RDPSLQ
Trigger: CTGAAGAGAAGGATCACGCCAGAGGATGTGGTTATC...GGACAAGTGTGACTTCACGGAGATCCACAGATACTTTGTGGACAAGGCCGCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522121.5
CDS-3UTR GCA 90 bp GATCTCCGTGAAGTCACACTTGTCCAGGCTCTTGATGACTTCCCTCTCTTCCACTCTTCTTTTAGCTTCTaGTTCTCCTCCCTGCTCAGG +
Preference number: 4 (lower is better)
Translates to: DLREVTLVQALDDFPLFHSSFSF*FSSLLR
Trigger: CCTGAGCAGGGAGGAGAAGCAGAAGCTAAAAGAAGA...GTGGAAGAGAGGGAAGTCATCAAGAGCCTGGACAAGTGTGACTTCACGGAGATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000522121.5
ENST00000523417.5
CDS-3UTR GCA 90 bp GCTGTCTCCCCCTTCAGCTTCGAGCAAGGGTTCAGCATGATGTACTTGATGGAGTTCGTCTGGAGATTCTaGATCGACTTCTCGAACGTA +
Preference number: 4 (lower is better)
Translates to: AVSPFSFEQGFSMMYLMEFVWRF*IDFSNV
Trigger: TACGTTCGAGAAGTCGATGCAGAATCTCCAGACGAA...CTCCATCAAGTACATCATGCTGAACCCTTGCTCGAAGCTGAAGGGGGAGACAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000518951.6
CDS-3UTR CCA 90 bp TGTTTCTCCTTTCGTTTCCTACACAACAAAAACTCTGCACAGCCCATGGACAAAAGGATGCCGGGCAGCTaGTGCCACCTCACAAAGCTG +
Preference number: 4 (lower is better)
Translates to: CFSFRFLHNKNSAQPMDKRMPGS*CHLTKL
Trigger: CAGCTTTGTGAGGTGGCACCAGCTGCCCGGCATCCT...TTTGTCCATGGGCTGTGCAGAGTTTTTGTTGTGTAGGAAACGAAAGGAGAAACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000522121.5
3UTR CAA 72 bp TCCACAAAGTATCTGTGGATCTCCGTGAAGTCACACTaGTCCAGGCTCTTGATGACTTCCCTCTCTTCCACC +
Preference number: 4 (lower is better)
Translates to: STKYLWISVKSH*SRLLMTSLSST
Trigger: GGTGGAAGAGAGGGAAGTCATCAAGAGCCTGGACAAGTGTGACTTCACGGAGATCCACAGATACTTTGTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522121.5
ENST00000523417.5
CDS-3UTR GCA 90 bp GATCTCCGTGAAGTCACACTTGTCCAGGCTCTTGATGACTTCCCTCTCTTCCACGACATTCACAGCATGTaGGTCTGGCAAAGAACCTTT +
Preference number: 4 (lower is better)
Translates to: DLREVTLVQALDDFPLFHDIHSM*VWQRTF
Trigger: AAAGGTTCTTTGCCAGACGCACATGCTGTGAATGTC...GTGGAAGAGAGGGAAGTCATCAAGAGCCTGGACAAGTGTGACTTCACGGAGATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523417.5
CDS-3UTR CCA 90 bp AGAGCTGTAAGTTCTTGTACACCGGCTTCTCCACCGGCACTCTGTTGTAGTAGCTCCACAAAGTATCTGTaGATCTCCGTGAAGTCACAC +
Preference number: 4 (lower is better)
Translates to: RAVSSCTPASPPALCCSSSTKYL*ISVKSH
Trigger: GTGTGACTTCACGGAGATCCACAGATACTTTGTGGA...GCTACTACAACAGAGTGCCGGTGGAGAAGCCGGTGTACAAGAACTTACAGCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518951.6
CDS-3UTR CCA 90 bp GATCTCCGTGAAGTCACACTTGTCCAGGCTCTTGATGACTTCCCTCTCTTCCACTCCACAAAGTATCTGTaGATCTCCGTGAAGTCACAC +
Preference number: 4 (lower is better)
Translates to: DLREVTLVQALDDFPLFHSTKYL*ISVKSH
Trigger: GTGTGACTTCACGGAGATCCACAGATACTTTGTGGA...GTGGAAGAGAGGGAAGTCATCAAGAGCCTGGACAAGTGTGACTTCACGGAGATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522121.5
ENST00000523417.5
CDS-3UTR CCA 90 bp TGTTTCTCCTTTCGTTTCCTACACAACAAAAACTCTGCACAGCCCATGGACAAAACTCTGCACAGCCCATaGACAAAAGCCCAGGCTTGC +
Preference number: 4 (lower is better)
Translates to: CFSFRFLHNKNSAQPMDKTLHSP*TKAQAC
Trigger: GCAAGCCTGGGCTTTTGTCCATGGGCTGTGCAGAGT...TTTGTCCATGGGCTGTGCAGAGTTTTTGTTGTGTAGGAAACGAAAGGAGAAACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000522121.5
CDS GCA 90 bp GAGGCCGCGAGGCCCCGCGCTGGACTAGCGCCACCTGAGGAGACCTaGACTTCTCTGGCCCTGCCGCCTTCCCTCCCAGTGCAGCCCTGT +
Preference number: 5 (lower is better)
Translates to: EAARPRAGLAPPEET*TSLALPPSLPVQPC
Trigger: ACAGGGCTGCACTGGGAGGGAAGGCGGCAGGGCCAGAGAAGTGCAGGTCTCCTCAGGTGGCGCTAGTCCAGCGCGGGGCCTCGCGGCCTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517857.1
CDS GCA 90 bp CACAGCACCAGCTGGCGGTGGGAAGTCCCGCCCGAGGCCAGAAGCTaGGAACACATCTCAGGCCCCTCCCGGCCTCGGGAAGAGTGGGCA +
Preference number: 5 (lower is better)
Translates to: HSTSWRWEVPPEARS*EHISGPSRPREEWA
Trigger: TGCCCACTCTTCCCGAGGCCGGGAGGGGCCTGAGATGTGTTCGCAGCTTCTGGCCTCGGGCGGGACTTCCCACCGCCAGCTGGTGCTGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505857.2
CDS GCA 90 bp CCCCAGCCACTCCCTTACTCAGTGAGGACCCAGGGCTGCTCACTGTaGCACCCGCCCGCCGCGCAGCACCATTCCCCAGCTACAGGGACA +
Preference number: 5 (lower is better)
Translates to: PQPLPYSVRTQGCSL*HPPAAQHHSPATGT
Trigger: TGTCCCTGTAGCTGGGGAATGGTGCTGCGCGGCGGGCGGGTGGCACAGTGAGCAGCCCTGGGTCCTCACTGAGTAAGGGAGTGGCTGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505857.2
CDS-3UTR CAA 90 bp CCATCGGCCTCCGGGTGCAGCTGGACGTGCTCCACGCGGAGGGAACAGCAGCCCAAATTCCACCACGTGTaGGCAGCCATCGGCCTCCGG +
Preference number: 5 (lower is better)
Translates to: PSASGCSWTCSTRREQQPKFHHV*AAIGLR
Trigger: CCGGAGGCCGATGGCTGCCAACACGTGGTGGAATTT...GGGCTGCTGTTCCCTCCGCGTGGAGCACGTCCAGCTGCACCCGGAGGCCGATGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518951.6
CDS TCA 90 bp CCCCAGCTGCCAAGTCAGATACAGAGGAGGGCCGTGGGCGGAGGGTaGGCAGCCCGTCAGGACCTGACTCGCAGGAGGGTGAGATGCTCG +
Preference number: 5 (lower is better)
Translates to: PQLPSQIQRRAVGGG*AARQDLTRRRVRCS
Trigger: CGAGCATCTCACCCTCCTGCGAGTCAGGTCCTGACGGGCTGCTCACCCTCCGCCCACGGCCCTCCTCTGTATCTGACTTGGCAGCTGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517857.1
CDS GCA 90 bp CAGACACTTCGCTTAAGTGGGAATGGCACGGGGCCCACCTCGGGCTaGACGCTGGGTCAGAGGCGCCATCCCTGGGAACCCCGAGGAGGT +
Preference number: 5 (lower is better)
Translates to: QTLRLSGNGTGPTSG*TLGQRRHPWEPRGG
Trigger: ACCTCCTCGGGGTTCCCAGGGATGGCGCCTCTGACCCAGCGTGCAGCCCGAGGTGGGCCCCGTGCCATTCCCACTTAAGCGAAGTGTCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505857.2
CDS-3UTR CAA 90 bp GCAGCCATCGGCCTCCGGGTGCAGCTGGACGTGCTCCACGCGGAGGGAACAGCATTCAGCATCCCCATCTaGGGATGGTCGCCACGGCCA +
Preference number: 5 (lower is better)
Translates to: AAIGLRVQLDVLHAEGTAFSIPI*GWSPRP
Trigger: TGGCCGTGGCGACCATCCCAAGATGGGGATGCTGAA...TGCTGTTCCCTCCGCGTGGAGCACGTCCAGCTGCACCCGGAGGCCGATGGCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518951.6
CDS TCA 90 bp CCACCCGCCCGCCGCGCAGCACCATTCCCCAGCTACAGGGACAGCTaGTGGTCACACAGACCCCACAGCGATCTCTGTCACTCCCAGACG +
Preference number: 5 (lower is better)
Translates to: PPARRAAPFPSYRDS*WSHRPHSDLCHSQT
Trigger: CGTCTGGGAGTGACAGAGATCGCTGTGGGGTCTGTGTGACCATCAGCTGTCCCTGTAGCTGGGGAATGGTGCTGCGCGGCGGGCGGGTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505857.2
CDS TCA 90 bp AGGGAGGGAAGGGCAGCAGACACCCACGGTCCTCTCAGGATGTGCTaGCTGCAGAGGCCTAGAGTCCCACAGGGAAGCCGTGGGAGGCCC +
Preference number: 5 (lower is better)
Translates to: REGRAADTHGPLRMC*LQRPRVPQGSRGRP
Trigger: GGGCCTCCCACGGCTTCCCTGTGGGACTCTAGGCCTCTGCAGTCAGCACATCCTGAGAGGACCGTGGGTGTCTGCTGCCCTTCCCTCCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505857.2
CDS GCA 90 bp GACGTGCCCAGGGCCACCTGCTTGTTCTCCTCCTTGTCCGTGGCCTaGACACTCAGCTGCGCCAGCTGCTCCTGCAGCTTCTCCAGGAGC +
Preference number: 5 (lower is better)
Translates to: DVPRATCLFSSLSVA*TLSCASCSCSFSRS
Trigger: GCTCCTGGAGAAGCTGCAGGAGCAGCTGGCGCAGCTGAGTGTGCAGGCCACGGACAAGGAGGAGAACAAGCAGGTGGCCCTGGGCACGTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000329245.9
ENST00000517857.1
ENST00000519148.5
ENST00000519977.5
ENST00000521193.5
ENST00000523676.5
CDS GCA 90 bp TCATGCGCAGAGACCCATCCCCATGCGGCTACCCCAGGCCCAGTATaGGCCGGCAGGGCTTCTCACATGTCCTCCAGGAAAGCGCCTGGG +
Preference number: 5 (lower is better)
Translates to: SCAETHPHAATPGPV*AGRASHMSSRKAPG
Trigger: CCCAGGCGCTTTCCTGGAGGACATGTGAGAAGCCCTGCCGGCGCATACTGGGCCTGGGGTAGCCGCATGGGGATGGGTCTCTGCGCATGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523676.5
CDS TCA 90 bp GCCTGGTCGGCTGGGATGAGTGTCCTCAGAGCAACAGGAAGTCTCTaGAGGGTCTGGCTCCACTGCCCTTCTGCGTCCTGCGCGAGCCCG +
Preference number: 5 (lower is better)
Translates to: AWSAGMSVLRATGSL*RVWLHCPSASCASP
Trigger: CGGGCTCGCGCAGGACGCAGAAGGGCAGTGGAGCCAGACCCTTCAGAGACTTCCTGTTGCTCTGAGGACACTCATCCCAGCCGACCAGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519591.5
CDS CCA 90 bp GCTTGGACGTGCCCAGGGCCACCTGCTTGTTCTCCTCCTTGTCCGTaGCCTGCACACTCAGCTGCGCCAGCTGCTCCTGCAGCTTCTCCA +
Preference number: 5 (lower is better)
Translates to: AWTCPGPPACSPPCP*PAHSAAPAAPAASP
Trigger: TGGAGAAGCTGCAGGAGCAGCTGGCGCAGCTGAGTGTGCAGGCCACGGACAAGGAGGAGAACAAGCAGGTGGCCCTGGGCACGTCCAAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000329245.9
ENST00000517857.1
ENST00000519148.5
ENST00000519977.5
ENST00000521193.5
ENST00000523676.5
CDS CCA 90 bp GGGCACCAGGCACCCCGGTCTGAACGCTCCCACTCATCGGCTGACTaGCCACCCTCACCCACACCTCACACTATGGCTGCTCTCACTCCA +
Preference number: 5 (lower is better)
Translates to: GHQAPRSERSHSSAD*PPSPTPHTMAALTP
Trigger: TGGAGTGAGAGCAGCCATAGTGTGAGGTGTGGGTGAGGGTGGCCAGTCAGCCGATGAGTGGGAGCGTTCAGACCGGGGTGCCTGGTGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505857.2
CDS CCA 90 bp AGGAGACCTGCACGTGACCCCAGCCAGGTAGTGCTGTTGGGGGCCTaGTGGGCCTGGTCGGCTGGGATGAGTGTCCTCAGAGCAACAGGA +
Preference number: 5 (lower is better)
Translates to: RRPARDPSQVVLLGA*WAWSAGMSVLRATG
Trigger: TCCTGTTGCTCTGAGGACACTCATCCCAGCCGACCAGGCCCACCAGGCCCCCAACAGCACTACCTGGCTGGGGTCACGTGCAGGTCTCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000518760.5
ENST00000519591.5
ENST00000522043.1
CDS-3UTR CAA 90 bp TGCCCCGCCGGCGGCTCGGGGATCTTCGAGTCCCTGCTGCAGTTGATAACCACAGCGAAGTACGGGCCCTaGTGCTCCAGCTGTCTCCAC +
Preference number: 5 (lower is better)
Translates to: CPAGGSGIFESLLQLITTAKYGP*CSSCLH
Trigger: GTGGAGACAGCTGGAGCACAAGGGCCCGTACTTCGC...TGTGGTTATCAACTGCAGCAGGGACTCGAAGATCCCCGAGCCGCCGGCGGGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518951.6
CDS CCA 90 bp CGTGCTGGGCATCAAGGAACCTCTGACTCTGAGCACAGCACCAGCTaGCGGTGGGAAGTCCCGCCCGAGGCCAGAAGCTGCGAACACATC +
Preference number: 5 (lower is better)
Translates to: RAGHQGTSDSEHSTS*RWEVPPEARSCEHI
Trigger: GATGTGTTCGCAGCTTCTGGCCTCGGGCGGGACTTCCCACCGCCAGCTGGTGCTGTGCTCAGAGTCAGAGGTTCCTTGATGCCCAGCACG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505857.2
CDS CCA 90 bp AGACCTGCACGTGACCCCAGCCAGGTAGTGCTGTTGGGGGCCTGGTaGGCCTGGTCGGCTGGGATGAGTGTCCTCAGAGCAACAGGAAGT +
Preference number: 5 (lower is better)
Translates to: RPARDPSQVVLLGAW*AWSAGMSVLRATGS
Trigger: ACTTCCTGTTGCTCTGAGGACACTCATCCCAGCCGACCAGGCCCACCAGGCCCCCAACAGCACTACCTGGCTGGGGTCACGTGCAGGTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000518760.5
ENST00000519591.5
ENST00000522043.1
CDS-3UTR CAA 90 bp TCCCGGGGCCGCCGGATGTGCCACCCACTCCTGTTCTGCTGCTTTGTGACACTGTTCAGCATCCCCATCTaGGGATGGTCGCCACGGCCA +
Preference number: 5 (lower is better)
Translates to: SRGRRMCHPLLFCCFVTLFSIPI*GWSPRP
Trigger: TGGCCGTGGCGACCATCCCAAGATGGGGATGCTGAA...CAGTGTCACAAAGCAGCAGAACAGGAGTGGGTGGCACATCCGGCGGCCCCGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522121.5
CDS-3UTR CAA 90 bp ACCTCCTTCCACTGGTGCCCCGCCGGCGGCTCGGGGATCTTCGAGTCCCTGCTGTCCGTGAAGTCACACTaGTCCAGGCTCTTGATGACT +
Preference number: 5 (lower is better)
Translates to: TSFHWCPAGGSGIFESLLSVKSH*SRLLMT
Trigger: AGTCATCAAGAGCCTGGACAAGTGTGACTTCACGGA...CAGCAGGGACTCGAAGATCCCCGAGCCGCCGGCGGGGCACCAGTGGAAGGAGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518951.6
CDS-3UTR CAA 90 bp GCAGCCATCGGCCTCCGGGTGCAGCTGGACGTGCTCCACGCGGAGGGAACAGCATATAATTACGTGGTTTaGCGGGGCCGTCCCAGCTTA +
Preference number: 5 (lower is better)
Translates to: AAIGLRVQLDVLHAEGTAYNYVV*RGRPSL
Trigger: TAAGCTGGGACGGCCCCGCAAAACCACGTAATTATA...TGCTGTTCCCTCCGCGTGGAGCACGTCCAGCTGCACCCGGAGGCCGATGGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518951.6
CDS-3UTR CAA 90 bp GTCCCAGCTTACGGTCAGCCTGTCGAAGAGGTCGTCCCGGGGGTCCTTGTTCTCAGCTCCTGGAGGTGCTaGTTCAGGCTGGTCGTCTGG +
Preference number: 5 (lower is better)
Translates to: VPAYGQPVEEVVPGVLVLSSWRC*FRLVVW
Trigger: CCAGACGACCAGCCTGAACAAGCACCTCCAGGAGCT...GAGAACAAGGACCCCCGGGACGACCTCTTCGACAGGCTGACCGTAAGCTGGGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000518951.6
CDS GCA 90 bp GCTCTTCGGAAACTCCAGCATTTCATGCGCAGAGACCCATCCCCATaGGGCTACCCCAGGCCCAGTATGCGCCGGCAGGGCTTCTCACAT +
Preference number: 5 (lower is better)
Translates to: ALRKLQHFMRRDPSP*GYPRPSMRRQGFSH
Trigger: ATGTGAGAAGCCCTGCCGGCGCATACTGGGCCTGGGGTAGCCGCATGGGGATGGGTCTCTGCGCATGAAATGCTGGAGTTTCCGAAGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523676.5
CDS CCA 90 bp GATGGGCGTCAAGGGAGGAGCCACCCAGCACCTGGAGAGCAGCTGTaGTCACAGGCACGAATTCATCACAGCCACAGTCATCAGCACGGG +
Preference number: 5 (lower is better)
Translates to: DGRQGRSHPAPGEQL*SQARIHHSHSHQHG
Trigger: CCCGTGCTGATGACTGTGGCTGTGATGAATTCGTGCCTGTGACCACAGCTGCTCTCCAGGTGCTGGGTGGCTCCTCCCTTGACGCCCATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505857.2
ENST00000521024.1
CDS-3UTR CAA 90 bp CGTGTCTCGCTGTGGGATGGGGATGATCCGCCTCTTCCGAGGAGCTCAGGTACGTTCCGGGCTGCGGCCTaGTCCACAAAGTATCTGTGG +
Preference number: 5 (lower is better)
Translates to: RVSLWDGDDPPLPRSSGTFRAAA*STKYLW
Trigger: CCACAGATACTTTGTGGACAAGGCCGCAGCCCGGAA...CGTACCTGAGCTCCTCGGAAGAGGCGGATCATCCCCATCCCACAGCGAGACACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522121.5
CDS-3UTR CAA 90 bp TCCTCCCTGCTCAGGACTTTCCGGGCTGCGGCCTTGTCCACAAAGTATCTGTGGGACAAAAGCCCAGGCTaGCGGGCACCAGCTCACGGT +
Preference number: 5 (lower is better)
Translates to: SSLLRTFRAAALSTKYLWDKSPG*RAPAHG
Trigger: ACCGTGAGCTGGTGCCCGCAAGCCTGGGCTTTTGTC...CCACAGATACTTTGTGGACAAGGCCGCAGCCCGGAAAGTCCTGAGCAGGGAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522121.5
CDS GCA 90 bp TTCATAGAAGAAACGCACTCCGTCGGGAAGGGGCTCGTATGGGGGTaGGAAGTACGGGCCCTTGTGCTCCAGCTGTCTCCACTTCACCCC +
Preference number: 5 (lower is better)
Translates to: FIEETHSVGKGLVWG*EVRALVLQLSPLHP
Trigger: GGGGTGAAGTGGAGACAGCTGGAGCACAAGGGCCCGTACTTCGCACCCCCATACGAGCCCCTTCCCGACGGAGTGCGTTTCTTCTATGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000329245.9
ENST00000518007.5
ENST00000518760.5
ENST00000518951.6
ENST00000519139.6
ENST00000519148.5
ENST00000519591.5
ENST00000520950.5
ENST00000521193.5
ENST00000522041.5
ENST00000522043.1
ENST00000523417.5
ENST00000523676.5
CDS CCA 90 bp CCCACTCATCGGCTGACTGGCCACCCTCACCCACACCTCACACTATaGCTGCTCTCACTCCACCATCTGACCATCACAACACACGCCCAC +
Preference number: 5 (lower is better)
Translates to: PTHRLTGHPHPHLTL*LLSLHHLTITTHAH
Trigger: GTGGGCGTGTGTTGTGATGGTCAGATGGTGGAGTGAGAGCAGCCATAGTGTGAGGTGTGGGTGAGGGTGGCCAGTCAGCCGATGAGTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505857.2
CDS-3UTR CAA 90 bp GTCCCAGCTTACGGTCAGCCTGTCGAAGAGGTCGTCCCGGGGGTCCTTGTTCTCGAGTCCCTGCTGCAGTaGATAACCACATCCTCTGGC +
Preference number: 5 (lower is better)
Translates to: VPAYGQPVEEVVPGVLVLESLLQ*ITTSSG
Trigger: GCCAGAGGATGTGGTTATCAACTGCAGCAGGGACTC...GAGAACAAGGACCCCCGGGACGACCTCTTCGACAGGCTGACCGTAAGCTGGGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000518951.6
CDS-3UTR CAA 90 bp GATAAGATCTTAGCTGCTATGCTGTCCTCGGCGCGCGTCAGGGCCCGCAGCTGCTCGTCCCGGGGGTCCTaGTTCTCCATAAAGAGCTGT +
Preference number: 5 (lower is better)
Translates to: DKILAAMLSSARVRARSCSSRGS*FSIKSC
Trigger: ACAGCTCTTTATGGAGAACAAGGACCCCCGGGACGA...GCAGCTGCGGGCCCTGACGCGCGCCGAGGACAGCATAGCAGCTAAGATCTTATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000518951.6
CDS TCA 90 bp GCCTGGTCGGCTGGGATGAGTGTCCTCAGAGCAACAGGAAGTCTCTaGAGGGTCTGCCTGTGCACCCTCGGAGAGATGTGCCTCAATGCA +
Preference number: 5 (lower is better)
Translates to: AWSAGMSVLRATGSL*RVCLCTLGEMCLNA
Trigger: TGCATTGAGGCACATCTCTCCGAGGGTGCACAGGCAGACCCTTCAGAGACTTCCTGTTGCTCTGAGGACACTCATCCCAGCCGACCAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524092.1
CDS GCA 90 bp AAGACACCCTGCCCCATCTGGGGCTCTCTTTGGGTCCCAAGCTCCTaGAGGCAGACAGGACATTTCTGCAGCATGGCCTTAGGCAGCTGT +
Preference number: 5 (lower is better)
Translates to: KTPCPIWGSLWVPSS*RQTGHFCSMALGSC
Trigger: ACAGCTGCCTAAGGCCATGCTGCAGAAATGTCCTGTCTGCCTGCAGGAGCTTGGGACCCAAAGAGAGCCCCAGATGGGGCAGGGTGTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519139.6
CDS GCA 90 bp GTGAGGCTGTCAACTCTCCAGCTCTTCGGAAACTCCAGCATTTCATaGGCAGAGACCCATCCCCATGCGGCTACCCCAGGCCCAGTATGC +
Preference number: 5 (lower is better)
Translates to: VRLSTLQLFGNSSIS*AETHPHAATPGPVC
Trigger: GCATACTGGGCCTGGGGTAGCCGCATGGGGATGGGTCTCTGCGCATGAAATGCTGGAGTTTCCGAAGAGCTGGAGAGTTGACAGCCTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523676.5
CDS CCA 90 bp CCTTCCTTCATAGAAGAAACGCACTCCGTCGGGAAGGGGCTCGTATaGGGGTGCGAAGTACGGGCCCTTGTGCTCCAGCTGTCTCCACTT +
Preference number: 5 (lower is better)
Translates to: PSFIEETHSVGKGLV*GCEVRALVLQLSPL
Trigger: AAGTGGAGACAGCTGGAGCACAAGGGCCCGTACTTCGCACCCCCATACGAGCCCCTTCCCGACGGAGTGCGTTTCTTCTATGAAGGAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000329245.9
ENST00000518007.5
ENST00000518760.5
ENST00000518951.6
ENST00000519139.6
ENST00000519148.5
ENST00000519591.5
ENST00000520950.5
ENST00000521193.5
ENST00000522041.5
ENST00000522043.1
ENST00000523417.5
ENST00000523676.5
CDS-3UTR CAA 90 bp TCCGTGAAGTCACACTTGTCCAGGCTCTTGATGACTTCCCTCTCTTCCACCGCCGCGAAGTACGGGCCCTaGTGCTCCAGCTGTCTCCAC +
Preference number: 5 (lower is better)
Translates to: SVKSHLSRLLMTSLSSTAAKYGP*CSSCLH
Trigger: GTGGAGACAGCTGGAGCACAAGGGCCCGTACTTCGC...GGCGGTGGAAGAGAGGGAAGTCATCAAGAGCCTGGACAAGTGTGACTTCACGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523417.5
CDS TCA 90 bp AGAATGAGGATGCCGGGCAGCTGGTGCCACCTCACAAAGCTGTCGTaGAAGGCAGAGGGGTGGCATCAGGCCAAAGAAGAGGGTCCAGAA +
Preference number: 5 (lower is better)
Translates to: RMRMPGSWCHLTKLS*KAEGWHQAKEEGPE
Trigger: TTCTGGACCCTCTTCTTTGGCCTGATGCCACCCCTCTGCCTTTCACGACAGCTTTGTGAGGTGGCACCAGCTGCCCGGCATCCTCATTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522121.5
CDS GCA 90 bp CTGCAGGCAGACAGGACATTTCTGCAGCATGGCCTTAGGCAGCTGTaGAGGCCCTCAGCTGTGAATGGGTATGCTGATAGCGCACCACCA +
Preference number: 5 (lower is better)
Translates to: LQADRTFLQHGLRQL*RPSAVNGYADSAPP
Trigger: TGGTGGTGCGCTATCAGCATACCCATTCACAGCTGAGGGCCTGCACAGCTGCCTAAGGCCATGCTGCAGAAATGTCCTGTCTGCCTGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519139.6
CDS CCA 90 bp AGAAGAGAAGGGCAGGGAAAAGGCCAACTCCGGGAAGAAAGGCCCTaGGGCAAAGCGCATCCAAAGCCGTCACTCTCCTCTGCAGCTCTT +
Preference number: 5 (lower is better)
Translates to: RREGQGKGQLREERP*GKAHPKPSLSSAAL
Trigger: AAGAGCTGCAGAGGAGAGTGACGGCTTTGGATGCGCTTTGCCCCAGGGCCTTTCTTCCCGGAGTTGGCCTTTTCCCTGCCCTTCTCTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000505857.2
ENST00000520950.5
ENST00000521193.5
CDS-3UTR CAA 90 bp CCTCCTTCCACTGGTGCCCCGCCGGCGGCTCGGGGATCTTCGAGTCCCTGCTGCGGAAAACCTCCTTTGTaGTGTATTCATGATCTAACA +
Preference number: 5 (lower is better)
Translates to: PPSTGAPPAARGSSSPCCGKPPL*CIHDLT
Trigger: TGTTAGATCATGAATACACAACAAAGGAGGTTTTCC...GCAGCAGGGACTCGAAGATCCCCGAGCCGCCGGCGGGGCACCAGTGGAAGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000518951.6
CDS-3UTR CAA 90 bp CGTCCATCAGCTCCTGGAGGTGCTTGTTCAGGCTGGTCGTCTGGGGAGGAAAATTTCCGGGCTGCGGCCTaGTCCACAAAGTATCTGTGG +
Preference number: 5 (lower is better)
Translates to: RPSAPGGACSGWSSGEENFRAAA*STKYLW
Trigger: CCACAGATACTTTGTGGACAAGGCCGCAGCCCGGAA...ATTTTCCTCCCCAGACGACCAGCCTGAACAAGCACCTCCAGGAGCTGATGGACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518951.6
CDS-3UTR CAA 90 bp CTTCTCCTCCCTGCTCAGGACTTTCCGGGCTGCGGCCTTGTCCACAAAGTATCTTTCCGGGCTGCGGCCTaGTCCACAAAGTATCTGTGG +
Preference number: 5 (lower is better)
Translates to: LLLPAQDFPGCGLVHKVSFRAAA*STKYLW
Trigger: CCACAGATACTTTGTGGACAAGGCCGCAGCCCGGAA...AGATACTTTGTGGACAAGGCCGCAGCCCGGAAAGTCCTGAGCAGGGAGGAGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522121.5
ENST00000523417.5
CDS-3UTR CAA 90 bp GGGAGCGGATCTCGTCCACAAATCCCCGCAGGCGTCGAGCTGTTTCAAACTTCTCGAACGTACTGGGGGTaGCTCGCTGATGGTTGCAGA +
Preference number: 5 (lower is better)
Translates to: GSGSRPQIPAGVELFQTSRTYWG*LADGCR
Trigger: TCTGCAACCATCAGCGAGCAACCCCCAGTACGTTCG...AGAAGTTTGAAACAGCTCGACGCCTGCGGGGATTTGTGGACGAGATCCGCTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000518951.6
CDS GCA 90 bp CTTCGTCTGGAGATTCTGCATCGACTTCTCGAACGTACTGGGGGTTaGTCGCTGATGGTTGCAGAGAATGGCCACGACTCGGTTGGCTCG +
Preference number: 5 (lower is better)
Translates to: LRLEILHRLLERTGG*SLMVAENGHDSVGS
Trigger: CGAGCCAACCGAGTCGTGGCCATTCTCTGCAACCATCAGCGAGCAACCCCCAGTACGTTCGAGAAGTCGATGCAGAATCTCCAGACGAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329245.9
ENST00000519148.5
ENST00000521193.5
ENST00000523676.5
CDS TCA 90 bp ACCCTCACCCACACCTCACACTATGGCTGCTCTCACTCCACCATCTaGCCATCACAACACACGCCCACATCCATGCAGACTGGAGACACA +
Preference number: 5 (lower is better)
Translates to: TLTHTSHYGCSHSTI*PSQHTPTSMQTGDT
Trigger: TGTGTCTCCAGTCTGCATGGATGTGGGCGTGTGTTGTGATGGTCAGATGGTGGAGTGAGAGCAGCCATAGTGTGAGGTGTGGGTGAGGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505857.2
CDS CCA 90 bp CCTGGATCTTCGTCTGGAGATTCTGCATCGACTTCTCGAACGTACTaGGGGTTGCTCGCTGATGGTTGCAGAGAATGGCCACGACTCGGT +
Preference number: 5 (lower is better)
Translates to: PGSSSGDSASTSRTY*GLLADGCREWPRLG
Trigger: ACCGAGTCGTGGCCATTCTCTGCAACCATCAGCGAGCAACCCCCAGTACGTTCGAGAAGTCGATGCAGAATCTCCAGACGAAGATCCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329245.9
ENST00000519148.5
ENST00000521193.5
ENST00000523676.5
CDS-3UTR CAA 90 bp TGCTCAGGACTTTCCGGGCTGCGGCCTTGTCCACAAAGTATCTGTGGATCTCCGCACTTGTCCAGGCTCTaGATGACTTCCCTCTCTTCC +
Preference number: 5 (lower is better)
Translates to: CSGLSGLRPCPQSICGSPHLSRL*MTSLSS
Trigger: GGAAGAGAGGGAAGTCATCAAGAGCCTGGACAAGTG...CGGAGATCCACAGATACTTTGTGGACAAGGCCGCAGCCCGGAAAGTCCTGAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522121.5
ENST00000523417.5
CDS-3UTR CAA 90 bp GATGCAGACGGATGTTCCAGCCAGGCGGAGAGGAGAAAATCAGTACCTAAAGCAGGACTTGCCATCCCCTaGGGCTTTGTGCTCAGCCCT +
Preference number: 5 (lower is better)
Translates to: DADGCSSQAERRKSVPKAGLAIP*GFVLSP
Trigger: AGGGCTGAGCACAAAGCCCAAGGGGATGGCAAGTCC...TGCTTTAGGTACTGATTTTCTCCTCTCCGCCTGGCTGGAACATCCGTCTGCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519977.5
CDS-3UTR CAA 90 bp ACCTCCAACACTGTCTTGCTGGGGGTGAGGACTTTAACATGTGAACTGGAGGTGGGCACCCTGAACCGCTaGCACCAGGCAATGCTGATC +
Preference number: 5 (lower is better)
Translates to: TSNTVLLGVRTLTCELEVGTLNR*HQAMLI
Trigger: GATCAGCATTGCCTGGTGCAAGCGGTTCAGGGTGCC...CACCTCCAGTTCACATGTTAAAGTCCTCACCCCCAGCAAGACAGTGTTGGAGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000519977.5
CDS GCA 90 bp AGCACGGGCTGCAGTCTTAGATTCTACTCGCCGCGAATGGATGCATaGAGCCTGCCATCAAGCCACGGAGGTACCACATTTCTCAAAAGC +
Preference number: 5 (lower is better)
Translates to: STGCSLRFYSPRMDA*SLPSSHGGTTFLKS
Trigger: GCTTTTGAGAAATGTGGTACCTCCGTGGCTTGATGGCAGGCTGCATGCATCCATTCGCGGCGAGTAGAATCTAAGACTGCAGCCCGTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521024.1
CDS-3UTR CAA 90 bp GCTCTGCTAGTGACTGGAAGAAGTGCTGACCAGAGGGAGAATGAGGATGCCGGGTCCGTGAAGTCACACTaGTCCAGGCTCTTGATGACT +
Preference number: 5 (lower is better)
Translates to: ALLVTGRSADQRENEDAGSVKSH*SRLLMT
Trigger: AGTCATCAAGAGCCTGGACAAGTGTGACTTCACGGA...CCCGGCATCCTCATTCTCCCTCTGGTCAGCACTTCTTCCAGTCACTAGCAGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522121.5
CDS-3UTR CAA 90 bp GTCTCGTCTTCATTTCCCGAGACTTCCAGTCAGCCCGGTACTGGGAGCGGATCTAAGAGCTGTAAGTTCTaGTACACCGGCTTCTCCACC +
Preference number: 5 (lower is better)
Translates to: VSSSFPETSSQPGTGSGSKSCKF*YTGFST
Trigger: GGTGGAGAAGCCGGTGTACAAGAACTTACAGCTCTT...AGATCCGCTCCCAGTACCGGGCTGACTGGAAGTCTCGGGAAATGAAGACGAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518951.6
CDS-3UTR CAA 90 bp ACGGATGTTCCAGCCAGGCGGAGAGGAGAAAATCAGTACCTAAAGCATAAAAGACCATCCCCTTGGGCTTaGTGCTCAGCCCTCGCCCTC +
Preference number: 5 (lower is better)
Translates to: TDVPARRRGENQYLKHKRPSPWA*CSALAL
Trigger: GAGGGCGAGGGCTGAGCACAAAGCCCAAGGGGATGG...TCTTTTATGCTTTAGGTACTGATTTTCTCCTCTCCGCCTGGCTGGAACATCCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000519977.5
CDS TCA 90 bp TCTCTGAAGGGTCTGAGAGGGGAAAGCATGTGCAACAGACATTTCTaGAAGGGCCTTTCTGGCTGTTTCTGGCTCCACTGCCCTTCTGCG +
Preference number: 5 (lower is better)
Translates to: SLKGLRGESMCNRHF*KGLSGCFWLHCPSA
Trigger: CGCAGAAGGGCAGTGGAGCCAGAAACAGCCAGAAAGGCCCTTTCAGAAATGTCTGTTGCACATGCTTTCCCCTCTCAGACCCTTCAGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522043.1
CDS CCA 90 bp GTTTCAACACGGCTCGTCGTTAGAATTCAAAGTCTTCTCCTGCCATaGCGAGAGCCCAGGCGAACCTCTCCCGCTGTGTTTTGCTGTAGA +
Preference number: 5 (lower is better)
Translates to: VSTRLVVRIQSLLLP*REPRRTSPAVFCCR
Trigger: TCTACAGCAAAACACAGCGGGAGAGGTTCGCCTGGGCTCTCGCCATGGCAGGAGAAGACTTTGAATTCTAACGACGAGCCGTGTTGAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329245.9
ENST00000517857.1
ENST00000519148.5
ENST00000519977.5
ENST00000521193.5
ENST00000523676.5
CDS-3UTR CAA 90 bp GCTGTCTCCCCCTTCAGCTTCGAGCAAGGGTTCAGCATGATGTACTTGATGGAGCACTTGTCCAGGCTCTaGATGACTTCCCTCTCTTCC +
Preference number: 5 (lower is better)
Translates to: AVSPFSFEQGFSMMYLMEHLSRL*MTSLSS
Trigger: GGAAGAGAGGGAAGTCATCAAGAGCCTGGACAAGTG...CTCCATCAAGTACATCATGCTGAACCCTTGCTCGAAGCTGAAGGGGGAGACAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000518951.6
CDS-3UTR CAA 90 bp GGCTGCGGCCTTGTCCACAAAGTATCTGTGGATCTCCGTGAAGTCACACTTGTCCACTTGTCCAGGCTCTaGATGACTTCCCTCTCTTCC +
Preference number: 5 (lower is better)
Translates to: GCGLVHKVSVDLREVTLVHLSRL*MTSLSS
Trigger: GGAAGAGAGGGAAGTCATCAAGAGCCTGGACAAGTG...GACAAGTGTGACTTCACGGAGATCCACAGATACTTTGTGGACAAGGCCGCAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522121.5
ENST00000523417.5
CDS-3UTR CAA 90 bp CCGGGCTGCGGCCTTGTCCACAAAGTATCTGTGGATCTCCGTGAAGTCACACTTTCCGTGAAGTCACACTaGTCCAGGCTCTTGATGACT +
Preference number: 5 (lower is better)
Translates to: PGCGLVHKVSVDLREVTLSVKSH*SRLLMT
Trigger: AGTCATCAAGAGCCTGGACAAGTGTGACTTCACGGA...AAGTGTGACTTCACGGAGATCCACAGATACTTTGTGGACAAGGCCGCAGCCCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522121.5
ENST00000523417.5
CDS-3UTR CAA 90 bp GCTCAGGACTTTCCGGGCTGCGGCCTTGTCCACAAAGTATCTGTGGATCTCCGTACAGTAGCCGAACTCTaGCTGAAGTTTTTCTGCCTC +
Preference number: 5 (lower is better)
Translates to: AQDFPGCGLVHKVSVDLRTVAEL*LKFFCL
Trigger: GAGGCAGAAAAACTTCAGCAAGAGTTCGGCTACTGT...ACGGAGATCCACAGATACTTTGTGGACAAGGCCGCAGCCCGGAAAGTCCTGAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000522121.5
ENST00000523417.5
CDS-3UTR CAA 90 bp CTCAGGACTTTCCGGGCTGCGGCCTTGTCCACAAAGTATCTGTGGATCTCCGTGACAGTAGCCGAACTCTaGCTGAAGTTTTTCTGCCTC +
Preference number: 5 (lower is better)
Translates to: LRTFRAAALSTKYLWISVTVAEL*LKFFCL
Trigger: GAGGCAGAAAAACTTCAGCAAGAGTTCGGCTACTGT...CACGGAGATCCACAGATACTTTGTGGACAAGGCCGCAGCCCGGAAAGTCCTGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000522121.5
ENST00000523417.5
CDS TCA 90 bp GATTTCATGTGGAATCTAGGCCCTCAAGGATGGGGCCCTCAAAGATaGCACCAAGGTCTGTGCTTGAGAAGACAGAAGGAGCCGCTTCAC +
Preference number: 5 (lower is better)
Translates to: DFMWNLGPQGWGPQR*HQGLCLRRQKEPLH
Trigger: GTGAAGCGGCTCCTTCTGTCTTCTCAAGCACAGACCTTGGTGTCATCTTTGAGGGCCCCATCCTTGAGGGCCTAGATTCCACATGAAATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505857.2
CDS GCA 90 bp AAGAAGTTTCAACACGGCTCGTCGTTAGAATTCAAAGTCTTCTCCTaGCATGGCGAGAGCCCAGGCGAACCTCTCCCGCTGTGTTTTGCT +
Preference number: 5 (lower is better)
Translates to: KKFQHGSSLEFKVFS*HGESPGEPLPLCFA
Trigger: AGCAAAACACAGCGGGAGAGGTTCGCCTGGGCTCTCGCCATGGCAGGAGAAGACTTTGAATTCTAACGACGAGCCGTGTTGAAACTTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329245.9
ENST00000517857.1
ENST00000519148.5
ENST00000519977.5
ENST00000521193.5
ENST00000523676.5
CDS CCA 90 bp CTCCACCATCTGACCATCACAACACACGCCCACATCCATGCAGACTaGAGACACAGTGAAACACGCGTCTTGCAAGGAAAAACCTGTGAG +
Preference number: 5 (lower is better)
Translates to: LHHLTITTHAHIHAD*RHSETRVLQGKTCE
Trigger: CTCACAGGTTTTTCCTTGCAAGACGCGTGTTTCACTGTGTCTCCAGTCTGCATGGATGTGGGCGTGTGTTGTGATGGTCAGATGGTGGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505857.2
CDS GCA 90 bp CCTCAAGCACTGCTCTTGAGAGCAACTTTATCATCCACTGGCAACTaGTTCAAATTGGGCCCCGACTGTCTCCCATCACCTATCTGCAAC +
Preference number: 5 (lower is better)
Translates to: PQALLLRATLSSTGN*FKLGPDCLPSPICN
Trigger: GTTGCAGATAGGTGATGGGAGACAGTCGGGGCCCAATTTGAAGCAGTTGCCAGTGGATGATAAAGTTGCTCTCAAGAGCAGTGCTTGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521024.1
CDS GCA 90 bp GCTGCAGTCTTAGATTCTACTCGCCGCGAATGGATGCATGCAGCCTaGCATCAAGCCACGGAGGTACCACATTTCTCAAAAGCAAAAGCT +
Preference number: 5 (lower is better)
Translates to: AAVLDSTRREWMHAA*HQATEVPHFSKAKA
Trigger: AGCTTTTGCTTTTGAGAAATGTGGTACCTCCGTGGCTTGATGGCAGGCTGCATGCATCCATTCGCGGCGAGTAGAATCTAAGACTGCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521024.1
CDS-3UTR CAA 90 bp TCGATGAAATACAGGGCCACCGCCCGCTGTCTCGTCTTCATTTCCCGAGACTTCTCCTTTCGCCAGTCATaGAAGAAGTTCTTCCGGAAA +
Preference number: 5 (lower is better)
Translates to: SMKYRATARCLVFISRDFSFRQS*KKFFRK
Trigger: TTTCCGGAAGAACTTCTTCAATGACTGGCGAAAGGA...GAAGTCTCGGGAAATGAAGACGAGACAGCGGGCGGTGGCCCTGTATTTCATCGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518951.6
CDS-3UTR CAA 90 bp ACGGATGTTCCAGCCAGGCGGAGAGGAGAAAATCAGTACCTAAAGCATAAAAGATGCTTGTTCTCCTCCTaGTCCGTGGCCTGCACACTC +
Preference number: 5 (lower is better)
Translates to: TDVPARRRGENQYLKHKRCLFSS*SVACTL
Trigger: GAGTGTGCAGGCCACGGACAAGGAGGAGAACAAGCA...TCTTTTATGCTTTAGGTACTGATTTTCTCCTCTCCGCCTGGCTGGAACATCCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519977.5
CDS-3UTR CAA 90 bp CCGGGCTGCGGCCTTGTCCACAAAGTATCTGTGGATCTCCGTGAAGTCACACTTACCTTTCGCCAGTCATaGAAGAAGTTCTTCCGGAAA +
Preference number: 5 (lower is better)
Translates to: PGCGLVHKVSVDLREVTLTFRQS*KKFFRK
Trigger: TTTCCGGAAGAACTTCTTCAATGACTGGCGAAAGGT...AAGTGTGACTTCACGGAGATCCACAGATACTTTGTGGACAAGGCCGCAGCCCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523417.5
CDS CCA 90 bp CCTCCTTTGTTGTGTATTCATGATCTAACATCCTCCCATAAAAAGTaGCGACCTCCTCCGCTGCCACGCTCAATCTCACAGGCCTTCCTT +
Preference number: 5 (lower is better)
Translates to: PPLLCIHDLTSSHKK*RPPPLPRSISQAFL
Trigger: AAGGAAGGCCTGTGAGATTGAGCGTGGCAGCGGAGGAGGTCGCCACTTTTTATGGGAGGATGTTAGATCATGAATACACAACAAAGGAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000329245.9
ENST00000518007.5
ENST00000518760.5
ENST00000518951.6
ENST00000519139.6
ENST00000519148.5
ENST00000519591.5
ENST00000520950.5
ENST00000521193.5
ENST00000522041.5
ENST00000523417.5
ENST00000523676.5
CDS-3UTR CAA 90 bp GATCTCCGTGAAGTCACACTTGTCCAGGCTCTTGATGACTTCCCTCTCTTCCACGCCTTTCGCCAGTCATaGAAGAAGTTCTTCCGGAAA +
Preference number: 5 (lower is better)
Translates to: DLREVTLVQALDDFPLFHAFRQS*KKFFRK
Trigger: TTTCCGGAAGAACTTCTTCAATGACTGGCGAAAGGC...GTGGAAGAGAGGGAAGTCATCAAGAGCCTGGACAAGTGTGACTTCACGGAGATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522121.5
CDS TCA 90 bp TGTTTGGAGACCTCACTGAGAAGTGAAAAGGCAAAGTCTGGGAGATaGCATTCACAGCATGTGCGTCTGGCAAAGAACCTTTCGCCAGTC +
Preference number: 5 (lower is better)
Translates to: CLETSLRSEKAKSGR*HSQHVRLAKNLSPV
Trigger: GACTGGCGAAAGGTTCTTTGCCAGACGCACATGCTGTGAATGTCATCTCCCAGACTTTGCCTTTTCACTTCTCAGTGAGGTCTCCAAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523417.5
CDS CCA 90 bp TTTCTTCCCTCAAGCACTGCTCTTGAGAGCAACTTTATCATCCACTaGCAACTGCTTCAAATTGGGCCCCGACTGTCTCCCATCACCTAT +
Preference number: 5 (lower is better)
Translates to: FLPSSTALESNFIIH*QLLQIGPRLSPITY
Trigger: ATAGGTGATGGGAGACAGTCGGGGCCCAATTTGAAGCAGTTGCCAGTGGATGATAAAGTTGCTCTCAAGAGCAGTGCTTGAGGGAAGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521024.1
CDS-3UTR CAA 90 bp AACAAAAACTCTGCACAGCCCATGGACAAAAGCCCAGGCTTGCGGGCACCAGCTGGAAAACCTCCTTTGTaGTGTATTCATGATCTAACA +
Preference number: 5 (lower is better)
Translates to: NKNSAQPMDKSPGLRAPAGKPPL*CIHDLT
Trigger: TGTTAGATCATGAATACACAACAAAGGAGGTTTTCC...AGCTGGTGCCCGCAAGCCTGGGCTTTTGTCCATGGGCTGTGCAGAGTTTTTGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000522121.5
CDS-3UTR CAA 90 bp GATCTCCGTGAAGTCACACTTGTCCAGGCTCTTGATGACTTCCCTCTCTTCCACGTTACAGTTTTCTGTTaGGAGACCTCACTGAGAAGT +
Preference number: 5 (lower is better)
Translates to: DLREVTLVQALDDFPLFHVTVFC*ETSLRS
Trigger: ACTTCTCAGTGAGGTCTCCAAACAGAAAACTGTAAC...GTGGAAGAGAGGGAAGTCATCAAGAGCCTGGACAAGTGTGACTTCACGGAGATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523417.5
CDS-3UTR CAA 90 bp GATCTCCGTGAAGTCACACTTGTCCAGGCTCTTGATGACTTCCCTCTCTTCCACGGAAAACCTCCTTTGTaGTGTATTCATGATCTAACA +
Preference number: 5 (lower is better)
Translates to: DLREVTLVQALDDFPLFHGKPPL*CIHDLT
Trigger: TGTTAGATCATGAATACACAACAAAGGAGGTTTTCC...GTGGAAGAGAGGGAAGTCATCAAGAGCCTGGACAAGTGTGACTTCACGGAGATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000522121.5
ENST00000523417.5
CDS TCA 90 bp ACATTCACAGCATGTGCGTCTGGCAAAGAACCTTTCGCCAGTCATTaGAGAAGTTCTTCCGGAAAACCTCCTTTGTTGTGTATTCATGAT +
Preference number: 5 (lower is better)
Translates to: TFTACASGKEPFASH*RSSSGKPPLLCIHD
Trigger: ATCATGAATACACAACAAAGGAGGTTTTCCGGAAGAACTTCTTCAATGACTGGCGAAAGGTTCTTTGCCAGACGCACATGCTGTGAATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523417.5
CDS TCA 90 bp ATAAACGGCATAACTAAGTTACAGTTTTCTGTTTGGAGACCTCACTaGGAAGTGAAAAGGCAAAGTCTGGGAGATGACATTCACAGCATG +
Preference number: 5 (lower is better)
Translates to: INGITKLQFSVWRPH*EVKRQSLGDDIHSM
Trigger: CATGCTGTGAATGTCATCTCCCAGACTTTGCCTTTTCACTTCTCAGTGAGGTCTCCAAACAGAAAACTGTAACTTAGTTATGCCGTTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523417.5
CDS GCA 72 bp CCTTCTCCCACCTGGCTCCACTGCCCTTCTGCGTCCTaGGCGAGCCCGGGACACCCCGGGAGGCCGGGCGGC +
Preference number: 6 (lower is better)
Translates to: PSPTWLHCPSAS*ASPGHPGRPGG
Trigger: GCCGCCCGGCCTCCCGGGGTGTCCCGGGCTCGCGCAGGACGCAGAAGGGCAGTGGAGCCAGGTGGGAGAAGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329245.9
ENST00000518951.6
ENST00000523417.5
CDS TCA 72 bp GGAGGCCGCGAGGCCCCGCGCTGGACTAGCGCCACCTaGGGAGACCTGCACTTCTCTGGCCCTGCCGCCTTC +
Preference number: 6 (lower is better)
Translates to: GGREAPRWTSAT*GDLHFSGPAAF
Trigger: GAAGGCGGCAGGGCCAGAGAAGTGCAGGTCTCCTCAGGTGGCGCTAGTCCAGCGCGGGGCCTCGCGGCCTCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517857.1
CDS CCA 72 bp GTGGGAATGGCACGGGGCCCACCTCGGGCTGCACGCTaGGTCAGAGGCGCCATCCCTGGGAACCCCGAGGAG +
Preference number: 6 (lower is better)
Translates to: VGMARGPPRAAR*VRGAIPGNPEE
Trigger: CTCCTCGGGGTTCCCAGGGATGGCGCCTCTGACCCAGCGTGCAGCCCGAGGTGGGCCCCGTGCCATTCCCAC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505857.2
CDS GCA 72 bp CGCTTAAGTGGGAATGGCACGGGGCCCACCTCGGGCTaGACGCTGGGTCAGAGGCGCCATCCCTGGGAACCC +
Preference number: 6 (lower is better)
Translates to: RLSGNGTGPTSG*TLGQRRHPWEP
Trigger: GGGTTCCCAGGGATGGCGCCTCTGACCCAGCGTGCAGCCCGAGGTGGGCCCCGTGCCATTCCCACTTAAGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505857.2
CDS GCA 72 bp AGCTGGCGGTGGGAAGTCCCGCCCGAGGCCAGAAGCTaGGAACACATCTCAGGCCCCTCCCGGCCTCGGGAA +
Preference number: 6 (lower is better)
Translates to: SWRWEVPPEARS*EHISGPSRPRE
Trigger: TTCCCGAGGCCGGGAGGGGCCTGAGATGTGTTCGCAGCTTCTGGCCTCGGGCGGGACTTCCCACCGCCAGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505857.2
CDS CCA 72 bp ACCTCGGGCTGCACGCTGGGTCAGAGGCGCCATCCCTaGGAACCCCGAGGAGGTTATGGGGGCACCAGGCAC +
Preference number: 6 (lower is better)
Translates to: TSGCTLGQRRHP*EPRGGYGGTRH
Trigger: GTGCCTGGTGCCCCCATAACCTCCTCGGGGTTCCCAGGGATGGCGCCTCTGACCCAGCGTGCAGCCCGAGGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000505857.2
CDS GCA 72 bp CTCCCTTACTCAGTGAGGACCCAGGGCTGCTCACTGTaGCACCCGCCCGCCGCGCAGCACCATTCCCCAGCT +
Preference number: 6 (lower is better)
Translates to: LPYSVRTQGCSL*HPPAAQHHSPA
Trigger: AGCTGGGGAATGGTGCTGCGCGGCGGGCGGGTGGCACAGTGAGCAGCCCTGGGTCCTCACTGAGTAAGGGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505857.2
CDS CAA 90 bp GCCAGAGCCAGGAGACCTGCACGTGACCCCAGCCAGGTAGTGCTGTaGGGGGCCTGGTGGGCCTGGTCGGCTGGGATGAGTGTCCTCAGA +
Preference number: 6 (lower is better)
Translates to: ARARRPARDPSQVVL*GAWWAWSAGMSVLR
Trigger: TCTGAGGACACTCATCCCAGCCGACCAGGCCCACCAGGCCCCCAACAGCACTACCTGGCTGGGGTCACGTGCAGGTCTCCTGGCTCTGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000518760.5
ENST00000519591.5
ENST00000522043.1
CDS CCA 72 bp AAAGCGCCTGGGACCACCAACGGCCACCAGGGCCACTaGATCCATGCGGCTTGTGCCTGGCTCCACTGCCCT +
Preference number: 6 (lower is better)
Translates to: KAPGTTNGHQGH*IHAACAWLHCP
Trigger: AGGGCAGTGGAGCCAGGCACAAGCCGCATGGATCCAGTGGCCCTGGTGGCCGTTGGTGGTCCCAGGCGCTTT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523676.5
CDS CCA 72 bp TGCCCAGGGCCACCTGCTTGTTCTCCTCCTTGTCCGTaGCCTGCACACTCAGCTGCGCCAGCTGCTCCTGCA +
Preference number: 6 (lower is better)
Translates to: CPGPPACSPPCP*PAHSAAPAAPA
Trigger: TGCAGGAGCAGCTGGCGCAGCTGAGTGTGCAGGCCACGGACAAGGAGGAGAACAAGCAGGTGGCCCTGGGCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000329245.9
ENST00000517857.1
ENST00000519148.5
ENST00000519977.5
ENST00000521193.5
ENST00000523676.5
CDS CCA 72 bp CCCAGCCAGGTAGTGCTGTTGGGGGCCTGGTGGGCCTaGTCGGCTGGGATGAGTGTCCTCAGAGCAACAGGA +
Preference number: 6 (lower is better)
Translates to: PSQVVLLGAWWA*SAGMSVLRATG
Trigger: TCCTGTTGCTCTGAGGACACTCATCCCAGCCGACCAGGCCCACCAGGCCCCCAACAGCACTACCTGGCTGGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000518760.5
ENST00000519591.5
ENST00000522043.1
ENST00000524092.1
CDS CAA 72 bp TTGGACGTGCCCAGGGCCACCTGCTTGTTCTCCTCCTaGTCCGTGGCCTGCACACTCAGCTGCGCCAGCTGC +
Preference number: 6 (lower is better)
Translates to: LDVPRATCLFSS*SVACTLSCASC
Trigger: GCAGCTGGCGCAGCTGAGTGTGCAGGCCACGGACAAGGAGGAGAACAAGCAGGTGGCCCTGGGCACGTCCAA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000329245.9
ENST00000517857.1
ENST00000519148.5
ENST00000519977.5
ENST00000521193.5
ENST00000523676.5
CDS GCA 72 bp GAAACGCACTCCGTCGGGAAGGGGCTCGTATGGGGGTaGGAAGTACGGGCCCTTGTGCTCCAGCTGTCTCCA +
Preference number: 6 (lower is better)
Translates to: ETHSVGKGLVWG*EVRALVLQLSP
Trigger: TGGAGACAGCTGGAGCACAAGGGCCCGTACTTCGCACCCCCATACGAGCCCCTTCCCGACGGAGTGCGTTTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000329245.9
ENST00000518007.5
ENST00000518760.5
ENST00000518951.6
ENST00000519139.6
ENST00000519148.5
ENST00000519591.5
ENST00000520950.5
ENST00000521193.5
ENST00000522041.5
ENST00000522043.1
ENST00000523417.5
ENST00000523676.5
CDS GCA 72 bp GAGACCCATCCCCATGCGGCTACCCCAGGCCCAGTATaGGCCGGCAGGGCTTCTCACATGTCCTCCAGGAAA +
Preference number: 6 (lower is better)
Translates to: ETHPHAATPGPV*AGRASHMSSRK
Trigger: TTTCCTGGAGGACATGTGAGAAGCCCTGCCGGCGCATACTGGGCCTGGGGTAGCCGCATGGGGATGGGTCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523676.5
CDS GCA 72 bp AAACTCCAGCATTTCATGCGCAGAGACCCATCCCCATaGGGCTACCCCAGGCCCAGTATGCGCCGGCAGGGC +
Preference number: 6 (lower is better)
Translates to: KLQHFMRRDPSP*GYPRPSMRRQG
Trigger: GCCCTGCCGGCGCATACTGGGCCTGGGGTAGCCGCATGGGGATGGGTCTCTGCGCATGAAATGCTGGAGTTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523676.5
CDS GCA 72 bp TCTCCTTCTCCCACCTGGCTGCTTATGAGAGAGCCCTaGCTCCGAGGAGCTGGGTGGAAGGGGGTCCAGCAG +
Preference number: 6 (lower is better)
Translates to: SPSPTWLLMREP*LRGAGWKGVQQ
Trigger: CTGCTGGACCCCCTTCCACCCAGCTCCTCGGAGGCAGGGCTCTCTCATAAGCAGCCAGGTGGGAGAAGGAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000522041.5
CDS CCA 72 bp CGGAACACCTTGGCCGTCAGCCCGTCCATCAGCTCCTaGAGGTGCTTGTTCAGGCTGGTCGTGGTCAGCCTG +
Preference number: 6 (lower is better)
Translates to: RNTLAVSPSISS*RCLFRLVVVSL
Trigger: CAGGCTGACCACGACCAGCCTGAACAAGCACCTCCAGGAGCTGATGGACGGGCTGACGGCCAAGGTGTTCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329245.9
ENST00000519148.5
ENST00000521193.5
ENST00000523676.5
CDS TCA 72 bp AGGGCAGCAGACACCCACGGTCCTCTCAGGATGTGCTaGCTGCAGAGGCCTAGAGTCCCACAGGGAAGCCGT +
Preference number: 6 (lower is better)
Translates to: RAADTHGPLRMC*LQRPRVPQGSR
Trigger: ACGGCTTCCCTGTGGGACTCTAGGCCTCTGCAGTCAGCACATCCTGAGAGGACCGTGGGTGTCTGCTGCCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505857.2
CDS GCA 72 bp ACCTTGGCCGTCAGCCCGTCCATCAGCTCCTGGAGGTaGTTGTTCAGGCTGGTCGTGGTCAGCCTGTCGAAG +
Preference number: 6 (lower is better)
Translates to: TLAVSPSISSWR*LFRLVVVSLSK
Trigger: CTTCGACAGGCTGACCACGACCAGCCTGAACAAGCACCTCCAGGAGCTGATGGACGGGCTGACGGCCAAGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329245.9
ENST00000519148.5
ENST00000521193.5
ENST00000523676.5
CDS CAA 72 bp TTGGCCGTCAGCCCGTCCATCAGCTCCTGGAGGTGCTaGTTCAGGCTGGTCGTGGTCAGCCTGTCGAAGAGG +
Preference number: 6 (lower is better)
Translates to: LAVSPSISSWRC*FRLVVVSLSKR
Trigger: CCTCTTCGACAGGCTGACCACGACCAGCCTGAACAAGCACCTCCAGGAGCTGATGGACGGGCTGACGGCCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329245.9
ENST00000519148.5
ENST00000521193.5
ENST00000523676.5
CDS CCA 72 bp ATAGAAGAAACGCACTCCGTCGGGAAGGGGCTCGTATaGGGGTGCGAAGTACGGGCCCTTGTGCTCCAGCTG +
Preference number: 6 (lower is better)
Translates to: IEETHSVGKGLV*GCEVRALVLQL
Trigger: CAGCTGGAGCACAAGGGCCCGTACTTCGCACCCCCATACGAGCCCCTTCCCGACGGAGTGCGTTTCTTCTAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000329245.9
ENST00000518007.5
ENST00000518760.5
ENST00000518951.6
ENST00000519139.6
ENST00000519148.5
ENST00000519591.5
ENST00000520950.5
ENST00000521193.5
ENST00000522041.5
ENST00000522043.1
ENST00000523417.5
ENST00000523676.5
CDS CCA 72 bp ACAGAGAGAGGAACAGACACTTCGCTTAAGTGGGAATaGCACGGGGCCCACCTCGGGCTGCACGCTGGGTCA +
Preference number: 6 (lower is better)
Translates to: TERGTDTSLKWE*HGAHLGLHAGS
Trigger: TGACCCAGCGTGCAGCCCGAGGTGGGCCCCGTGCCATTCCCACTTAAGCGAAGTGTCTGTTCCTCTCTCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505857.2
CDS CAA 72 bp CTTCTTCTCCAGGACACTCCTGGACTTGCCATCCCCTaGGGCTTTGTGCTCAGCCCTCGCCCTCCTCAGCTC +
Preference number: 6 (lower is better)
Translates to: LLLQDTPGLAIP*GFVLSPRPPQL
Trigger: GAGCTGAGGAGGGCGAGGGCTGAGCACAAAGCCCAAGGGGATGGCAAGTCCAGGAGTGTCCTGGAGAAGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329245.9
ENST00000519148.5
ENST00000519977.5
ENST00000521193.5
ENST00000523676.5
CDS TCA 72 bp GCTGGGATGAGTGTCCTCAGAGCAACAGGAAGTCTCTaGAGGGTCTGGCTCCACTGCCCTTCTGCGTCCTGC +
Preference number: 6 (lower is better)
Translates to: AGMSVLRATGSL*RVWLHCPSASC
Trigger: GCAGGACGCAGAAGGGCAGTGGAGCCAGACCCTTCAGAGACTTCCTGTTGCTCTGAGGACACTCATCCCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519591.5
CDS TCA 72 bp ATGCCGGGCAGCTGGTGCCACCTCACAAAGCTGTCGTaGAAGGCAGAGGGGTGGCATCAGGCCAAAGAAGAG +
Preference number: 6 (lower is better)
Translates to: MPGSWCHLTKLS*KAEGWHQAKEE
Trigger: CTCTTCTTTGGCCTGATGCCACCCCTCTGCCTTTCACGACAGCTTTGTGAGGTGGCACCAGCTGCCCGGCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522121.5
CDS CCA 72 bp TTCTTCTCCAGGACACTCCTGGACTTGCCATCCCCTTaGGCTTTGTGCTCAGCCCTCGCCCTCCTCAGCTCT +
Preference number: 6 (lower is better)
Translates to: FFSRTLLDLPSP*ALCSALALLSS
Trigger: AGAGCTGAGGAGGGCGAGGGCTGAGCACAAAGCCCAAGGGGATGGCAAGTCCAGGAGTGTCCTGGAGAAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329245.9
ENST00000519148.5
ENST00000519977.5
ENST00000521193.5
ENST00000523676.5
CDS CAA 90 bp TCTGGCCCTGCCGCCTTCCCTCCCAGTGCAGCCCTGTCCCTGTCATaGTCATCAGTCATCCATCACAGCAAAAGACCAGCCGGGATCAAA +
Preference number: 6 (lower is better)
Translates to: SGPAAFPPSAALSLS*SSVIHHSKRPAGIK
Trigger: TTTGATCCCGGCTGGTCTTTTGCTGTGATGGATGACTGATGACAATGACAGGGACAGGGCTGCACTGGGAGGGAAGGCGGCAGGGCCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517857.1
CDS TCA 72 bp GCTGGGATGAGTGTCCTCAGAGCAACAGGAAGTCTCTaGAGGGTCTGCCTGTGCACCCTCGGAGAGATGTGC +
Preference number: 6 (lower is better)
Translates to: AGMSVLRATGSL*RVCLCTLGEMC
Trigger: GCACATCTCTCCGAGGGTGCACAGGCAGACCCTTCAGAGACTTCCTGTTGCTCTGAGGACACTCATCCCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524092.1
CDS GCA 72 bp CAACACGGCTCGTCGTTAGAATTCAAAGTCTTCTCCTaGCATGGCGAGAGCCCAGGCGAACCTCTCCCGCTG +
Preference number: 6 (lower is better)
Translates to: QHGSSLEFKVFS*HGESPGEPLPL
Trigger: CAGCGGGAGAGGTTCGCCTGGGCTCTCGCCATGGCAGGAGAAGACTTTGAATTCTAACGACGAGCCGTGTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000329245.9
ENST00000517857.1
ENST00000519148.5
ENST00000519977.5
ENST00000521193.5
ENST00000523676.5
CDS GCA 72 bp TTGTGCTCCAGCTGTCTCCACTTCACCCCGTCTTCGTaGTTCTCCTTCTCCCACCTCCTCTGCAGCTCTTCC +
Preference number: 6 (lower is better)
Translates to: LCSSCLHFTPSS*FSFSHLLCSSS
Trigger: GGAAGAGCTGCAGAGGAGGTGGGAGAAGGAGAAGCACGAAGACGGGGTGAAGTGGAGACAGCTGGAGCACAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519148.5
CDS GCA 72 bp TCAACTCTCCAGCTCTTCGGAAACTCCAGCATTTCATaGGCAGAGACCCATCCCCATGCGGCTACCCCAGGC +
Preference number: 6 (lower is better)
Translates to: STLQLFGNSSIS*AETHPHAATPG
Trigger: GCCTGGGGTAGCCGCATGGGGATGGGTCTCTGCGCATGAAATGCTGGAGTTTCCGAAGAGCTGGAGAGTTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523676.5
CDS CCA 72 bp GCACGGGCTGCAGTCTTAGATTCTACTCGCCGCGAATaGATGCATGCAGCCTGCCATCAAGCCACGGAGGTA +
Preference number: 6 (lower is better)
Translates to: ARAAVLDSTRRE*MHAACHQATEV
Trigger: TACCTCCGTGGCTTGATGGCAGGCTGCATGCATCCATTCGCGGCGAGTAGAATCTAAGACTGCAGCCCGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521024.1
CDS CCA 72 bp CGGCTCGTCGTTAGAATTCAAAGTCTTCTCCTGCCATaGCGAGAGCCCAGGCGAACCTCTCCCGCTGTGTTT +
Preference number: 6 (lower is better)
Translates to: RLVVRIQSLLLP*REPRRTSPAVF
Trigger: AAACACAGCGGGAGAGGTTCGCCTGGGCTCTCGCCATGGCAGGAGAAGACTTTGAATTCTAACGACGAGCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000329245.9
ENST00000517857.1
ENST00000519148.5
ENST00000519977.5
ENST00000521193.5
ENST00000523676.5
CDS CAA 90 bp TCTTCGTCTGGAGATTCTGCATCGACTTCTCGAACGTACTGGGGGTaGCTCGCTGATGGTTGCAGAGAATGGCCACGACTCGGTTGGCTC +
Preference number: 6 (lower is better)
Translates to: SSSGDSASTSRTYWG*LADGCREWPRLGWL
Trigger: GAGCCAACCGAGTCGTGGCCATTCTCTGCAACCATCAGCGAGCAACCCCCAGTACGTTCGAGAAGTCGATGCAGAATCTCCAGACGAAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329245.9
ENST00000519148.5
ENST00000521193.5
ENST00000523676.5
CDS GCA 72 bp TTGTGCTCCAGCTGTCTCCACTTCACCCCGTCTTCGTaGTTCTCCTTCTCCCACCTGAGGTGTTACAAGGTG +
Preference number: 6 (lower is better)
Translates to: LCSSCLHFTPSS*FSFSHLRCYKV
Trigger: CACCTTGTAACACCTCAGGTGGGAGAAGGAGAAGCACGAAGACGGGGTGAAGTGGAGACAGCTGGAGCACAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521193.5
CDS TCA 72 bp CACACCTCACACTATGGCTGCTCTCACTCCACCATCTaGCCATCACAACACACGCCCACATCCATGCAGACT +
Preference number: 6 (lower is better)
Translates to: HTSHYGCSHSTI*PSQHTPTSMQT
Trigger: AGTCTGCATGGATGTGGGCGTGTGTTGTGATGGTCAGATGGTGGAGTGAGAGCAGCCATAGTGTGAGGTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505857.2
CDS GCA 72 bp TGCTCCTTCTTTGCCTGGATCTTCGTCTGGAGATTCTaGATCGACTTCTCGAACGTACTGGGGGTTGCTCGC +
Preference number: 6 (lower is better)
Translates to: CSFFAWIFVWRF*IDFSNVLGVAR
Trigger: GCGAGCAACCCCCAGTACGTTCGAGAAGTCGATGCAGAATCTCCAGACGAAGATCCAGGCAAAGAAGGAGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329245.9
ENST00000519148.5
ENST00000521193.5
ENST00000523676.5
CDS TCA 72 bp GGTCTGAGAGGGGAAAGCATGTGCAACAGACATTTCTaGAAGGGCCTTTCTGGCTGTTTCTGGCTCCACTGC +
Preference number: 6 (lower is better)
Translates to: GLRGESMCNRHF*KGLSGCFWLHC
Trigger: GCAGTGGAGCCAGAAACAGCCAGAAAGGCCCTTTCAGAAATGTCTGTTGCACATGCTTTCCCCTCTCAGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522043.1
CDS GCA 72 bp TGCAGTCTTAGATTCTACTCGCCGCGAATGGATGCATaGAGCCTGCCATCAAGCCACGGAGGTACCACATTT +
Preference number: 6 (lower is better)
Translates to: CSLRFYSPRMDA*SLPSSHGGTTF
Trigger: AAATGTGGTACCTCCGTGGCTTGATGGCAGGCTGCATGCATCCATTCGCGGCGAGTAGAATCTAAGACTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521024.1
CDS GCA 72 bp CTGCTCTTGAGAGCAACTTTATCATCCACTGGCAACTaGTTCAAATTGGGCCCCGACTGTCTCCCATCACCT +
Preference number: 6 (lower is better)
Translates to: LLLRATLSSTGN*FKLGPDCLPSP
Trigger: AGGTGATGGGAGACAGTCGGGGCCCAATTTGAAGCAGTTGCCAGTGGATGATAAAGTTGCTCTCAAGAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521024.1
CDS CCA 72 bp CTGACCATCACAACACACGCCCACATCCATGCAGACTaGAGACACAGTGAAACACGCGTCTTGCAAGGAAAA +
Preference number: 6 (lower is better)
Translates to: LTITTHAHIHAD*RHSETRVLQGK
Trigger: TTTTCCTTGCAAGACGCGTGTTTCACTGTGTCTCCAGTCTGCATGGATGTGGGCGTGTGTTGTGATGGTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505857.2
CDS CCA 72 bp TCAAGCACTGCTCTTGAGAGCAACTTTATCATCCACTaGCAACTGCTTCAAATTGGGCCCCGACTGTCTCCC +
Preference number: 6 (lower is better)
Translates to: SSTALESNFIIH*QLLQIGPRLSP
Trigger: GGGAGACAGTCGGGGCCCAATTTGAAGCAGTTGCCAGTGGATGATAAAGTTGCTCTCAAGAGCAGTGCTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521024.1
CDS TCA 72 bp GAAGAGGGTCCAGAAGCGGAGCCTTTCGCCAGTCATTaGAGAAGTTCTTCCGGAAAACCTCCTTTGTTGTGT +
Preference number: 6 (lower is better)
Translates to: EEGPEAEPFASH*RSSSGKPPLLC
Trigger: ACACAACAAAGGAGGTTTTCCGGAAGAACTTCTTCAATGACTGGCGAAAGGCTCCGCTTCTGGACCCTCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522121.5
CDS GCA 72 bp TTAGATTCTACTCGCCGCGAATGGATGCATGCAGCCTaGCATCAAGCCACGGAGGTACCACATTTCTCAAAA +
Preference number: 6 (lower is better)
Translates to: LDSTRREWMHAA*HQATEVPHFSK
Trigger: TTTTGAGAAATGTGGTACCTCCGTGGCTTGATGGCAGGCTGCATGCATCCATTCGCGGCGAGTAGAATCTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521024.1
CDS CCA 72 bp GAGCAACTTTATCATCCACTGGCAACTGCTTCAAATTaGGCCCCGACTGTCTCCCATCACCTATCTGCAACT +
Preference number: 6 (lower is better)
Translates to: EQLYHPLATASN*APTVSHHLSAT
Trigger: AGTTGCAGATAGGTGATGGGAGACAGTCGGGGCCCAATTTGAAGCAGTTGCCAGTGGATGATAAAGTTGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521024.1
CDS CAA 72 bp AGAGCAACTTTATCATCCACTGGCAACTGCTTCAAATaGGGCCCCGACTGTCTCCCATCACCTATCTGCAAC +
Preference number: 6 (lower is better)
Translates to: RATLSSTGNCFK*GPDCLPSPICN
Trigger: GTTGCAGATAGGTGATGGGAGACAGTCGGGGCCCAATTTGAAGCAGTTGCCAGTGGATGATAAAGTTGCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521024.1
CDS TCA 72 bp CCCTCTCTTCCACCGCCATTTCCTTTCGCCAGTCATTaGAGAAGTTCTTCCGGAAAACCTCCTTTGTTGTGT +
Preference number: 6 (lower is better)
Translates to: PSLPPPFPFASH*RSSSGKPPLLC
Trigger: ACACAACAAAGGAGGTTTTCCGGAAGAACTTCTTCAATGACTGGCGAAAGGAAATGGCGGTGGAAGAGAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000329245.9
ENST00000518007.5
ENST00000518760.5
ENST00000518951.6
ENST00000519139.6
ENST00000519148.5
ENST00000519591.5
ENST00000520950.5
ENST00000521193.5
ENST00000522041.5
ENST00000523676.5
CDS CCA 72 bp TTGTGTATTCATGATCTAACATCCTCCCATAAAAAGTaGCGACCTCCTCCGCTGCCACGCTCAATCTCACAG +
Preference number: 6 (lower is better)
Translates to: LCIHDLTSSHKK*RPPPLPRSISQ
Trigger: CTGTGAGATTGAGCGTGGCAGCGGAGGAGGTCGCCACTTTTTATGGGAGGATGTTAGATCATGAATACACAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000329245.9
ENST00000518007.5
ENST00000518760.5
ENST00000518951.6
ENST00000519139.6
ENST00000519148.5
ENST00000519591.5
ENST00000520950.5
ENST00000521193.5
ENST00000522041.5
ENST00000522043.1
ENST00000523417.5
ENST00000523676.5
CDS CCA 72 bp TTTCTTGGGTGGCTTTTCATGGTGATTAGTCTTCACTaGCGTGGTGATCTGTGCAAATCTGGAGAGCAGCTG +
Preference number: 6 (lower is better)
Translates to: FLGWLFMVISLH*RGDLCKSGEQL
Trigger: CAGCTGCTCTCCAGATTTGCACAGATCACCACGCCAGTGAAGACTAATCACCATGAAAAGCCACCCAAGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518007.5
CDS CAA 90 bp CACGCCCACATCCATGCAGACTGGAGACACAGTGAAACACGCGTCTaGCAAGGAAAAACCTGTGAGATTTCTGAAAATCATGTTAGAGCC +
Preference number: 6 (lower is better)
Translates to: HAHIHADWRHSETRV*QGKTCEISENHVRA
Trigger: GGCTCTAACATGATTTTCAGAAATCTCACAGGTTTTTCCTTGCAAGACGCGTGTTTCACTGTGTCTCCAGTCTGCATGGATGTGGGCGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000505857.2
CDS TCA 72 bp GCATGTGCGTCTGGCAAAGAACCTTTCGCCAGTCATTaGAGAAGTTCTTCCGGAAAACCTCCTTTGTTGTGT +
Preference number: 6 (lower is better)
Translates to: ACASGKEPFASH*RSSSGKPPLLC
Trigger: ACACAACAAAGGAGGTTTTCCGGAAGAACTTCTTCAATGACTGGCGAAAGGTTCTTTGCCAGACGCACATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523417.5
CDS GCA 72 bp AAAAGGCAAAGTCTGGGAGATGACATTCACAGCATGTaGGTCTGGCAAAGAACCTTTCGCCAGTCATTGAAG +
Preference number: 6 (lower is better)
Translates to: KRQSLGDDIHSM*VWQRTFRQSLK
Trigger: CTTCAATGACTGGCGAAAGGTTCTTTGCCAGACGCACATGCTGTGAATGTCATCTCCCAGACTTTGCCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523417.5
CDS CAA 72 bp AGCATGTGCGTCTGGCAAAGAACCTTTCGCCAGTCATaGAAGAAGTTCTTCCGGAAAACCTCCTTTGTTGTG +
Preference number: 6 (lower is better)
Translates to: SMCVWQRTFRQS*KKFFRKTSFVV
Trigger: CACAACAAAGGAGGTTTTCCGGAAGAACTTCTTCAATGACTGGCGAAAGGTTCTTTGCCAGACGCACATGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523417.5
CDS CCA 72 bp TTTCTTGGGTGGCTTTTCATGGTGATTAGTCTTCACTaGCGTGGTGATCTGTGCAAATCCAACAGTAAGATT +
Preference number: 6 (lower is better)
Translates to: FLGWLFMVISLH*RGDLCKSNSKI
Trigger: AATCTTACTGTTGGATTTGCACAGATCACCACGCCAGTGAAGACTAATCACCATGAAAAGCCACCCAAGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518760.5
CDS CAA 72 bp ATCCATGCAGACTGGAGACACAGTGAAACACGCGTCTaGCAAGGAAAAACCTGTGAGATTTCTGAAAATCAT +
Preference number: 6 (lower is better)
Translates to: IHADWRHSETRV*QGKTCEISENH
Trigger: ATGATTTTCAGAAATCTCACAGGTTTTTCCTTGCAAGACGCGTGTTTCACTGTGTCTCCAGTCTGCATGGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000505857.2
CDS CCA 72 bp TTTCTTGGGTGGCTTTTCATGGTGATTAGTCTTCACTaGCGTGGTGATCTGTGCAAATCTAGAATTCAAATG +
Preference number: 6 (lower is better)
Translates to: FLGWLFMVISLH*RGDLCKSRIQM
Trigger: CATTTGAATTCTAGATTTGCACAGATCACCACGCCAGTGAAGACTAATCACCATGAAAAGCCACCCAAGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505857.2
CDS TCA 72 bp ATAACTAAGTTACAGTTTTCTGTTTGGAGACCTCACTaGGAAGTGAAAAGGCAAAGTCTGGGAGATGACATT +
Preference number: 6 (lower is better)
Translates to: ITKLQFSVWRPH*EVKRQSLGDDI
Trigger: AATGTCATCTCCCAGACTTTGCCTTTTCACTTCTCAGTGAGGTCTCCAAACAGAAAACTGTAACTTAGTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523417.5