Pregenerated sensors for TOP1 (Homo sapiens)
Ensembl gene IDs: ENSG00000198900Ensembl transcript IDs: ENST00000361337.3, ENST00000680945.1, ENST00000681058.1, ENST00000681113.1, ENST00000681392.1, ENST00000681884.1
Found 135 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ATGGTGGGGCAAATACTGGACCTTTATGTTCTAGGAATTTCCACTTaGTGCCTTCAGGATAGCGCTCTTCTTCCCACCTGTAGTCCCAGC | + |
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Preference number: 1 (lower is better) Translates to: MVGQILDLYVLGIST*CLQDSALLPTCSPS Trigger: GCTGGGACTACAGGTGGGAAGAAGAGCGCTATCCTGAAGGCATCAAGTGGAAATTCCTAGAACATAAAGGTCCAGTATTTGCCCCACCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000681113.1 |
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| 3UTR GCA 90 bp | TGGATGTTCTCTGTCCAGGAAACCAGCCAAGTAACCTTGTTATCATaGCGGACTTCTTTCCACTTATGTCCTGGAGGAGGAGAAGGAACC | + |
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Preference number: 1 (lower is better) Translates to: WMFSVQETSQVTLLS*RTSFHLCPGGGEGT Trigger: GGTTCCTTCTCCTCCTCCAGGACATAAGTGGAAAGAAGTCCGGCATGATAACAAGGTTACTTGGCTGGTTTCCTGGACAGAGAACATCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000681113.1 |
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| 3UTR GCA 90 bp | ATATTCATGGTCGAGCATTTTTGCAAAGAACGTAGCTACTTCCTCTaGTTTGGGGCTCAGCTTCATGACTTTACCTGGGTCATTCTCTGG | + |
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Preference number: 1 (lower is better) Translates to: IFMVEHFCKERSYFL*FGAQLHDFTWVILW Trigger: CCAGAGAATGACCCAGGTAAAGTCATGAAGCTGAGCCCCAAAGCAGAGGAAGTAGCTACGTTCTTTGCAAAAATGCTCGACCATGAATAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000681113.1 |
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| 3UTR CCA 90 bp | TCCTTGCTCATCTGTTTCCGAGCTTCCGTCTGGGCTTTGAAATACTaGCTCATCTGGGTAAAATCACATTTGCTTAGGTTGGTGATAATA | + |
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Preference number: 1 (lower is better) Translates to: SLLICFRASVWALKY*LIWVKSHLLRLVII Trigger: TATTATCACCAACCTAAGCAAATGTGATTTTACCCAGATGAGCCAGTATTTCAAAGCCCAGACGGAAGCTCGGAAACAGATGAGCAAGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000681113.1 |
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| 3UTR CCA 90 bp | ATCTGTTTCCGAGCTTCCGTCTGGGCTTTGAAATACTGGCTCATCTaGGTAAAATCACATTTGCTTAGGTTGGTGATAATATTCTTCTCT | + |
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Preference number: 1 (lower is better) Translates to: ICFRASVWALKYWLI*VKSHLLRLVIIFFS Trigger: AGAGAAGAATATTATCACCAACCTAAGCAAATGTGATTTTACCCAGATGAGCCAGTATTTCAAAGCCCAGACGGAAGCTCGGAAACAGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000681113.1 |
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| 3UTR-3UTR GCA 90 bp | CATGCCGGACTTCTTTCCACTTATGTCCTGGAGGAGGAGAAGGAACCTTGGCATCCATCTTGGGGTGGTTaGCGCGGCCACGGAAAAGTC | + |
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Preference number: 2 (lower is better) Translates to: HAGLLSTYVLEEEKEPWHPSWGG*RGHGKV Trigger: GACTTTTCCGTGGCCGCGGCAACCACCCCAAGATGG...ATGCCAAGGTTCCTTCTCCTCCTCCAGGACATAAGTGGAAAGAAGTCCGGCATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000681113.1 |
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| 3UTR-3UTR CCA 90 bp | CATGCCGGACTTCTTTCCACTTATGTCCTGGAGGAGGAGAAGGAACCTTGGCATAGGACAGGGATGACCTaGGGGAGGCCCAGTCACTCT | + |
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Preference number: 2 (lower is better) Translates to: HAGLLSTYVLEEEKEPWHRTGMT*GRPSHS Trigger: AGAGTGACTGGGCCTCCCCCAGGTCATCCCTGTCCT...ATGCCAAGGTTCCTTCTCCTCCTCCAGGACATAAGTGGAAAGAAGTCCGGCATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000681113.1 |
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| 3UTR-3UTR CCA 90 bp | AGCTTGTCGATGAAGTACAGGGCTACAGCTCTCTGCCGGACTTTCATCTCTTTGTCAGCATGCCCATCTTaGGGTGGTTGCCGCGGCCAC | + |
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Preference number: 2 (lower is better) Translates to: SLSMKYRATALCRTFISLSACPS*GGCRGH Trigger: GTGGCCGCGGCAACCACCCCAAGATGGGCATGCTGA...CAAAGAGATGAAAGTCCGGCAGAGAGCTGTAGCCCTGTACTTCATCGACAAGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000681113.1 |
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| 3UTR-3UTR CCA 90 bp | AGTACAGGGCTACAGCTCTCTGCCGGACTTTCATCTCTTTGGACTTCCAGTCTTTGGAAGAGGCTCATATaGTGGGGCAAATACTGGACC | + |
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Preference number: 2 (lower is better) Translates to: STGLQLSAGLSSLWTSSLWKRLI*WGKYWT Trigger: GGTCCAGTATTTGCCCCACCATATGAGCCTCTTCCA...AAGACTGGAAGTCCAAAGAGATGAAAGTCCGGCAGAGAGCTGTAGCCCTGTACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000681113.1 |
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| 3UTR-3UTR TCA 90 bp | AGTACAGGGCTACAGCTCTCTGCCGGACTTTCATCTCTTTGGACTTCCAGTCTTCTAGGAATTTCCACTTaGTGCCTTCAGGATAGCGCT | + |
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Preference number: 2 (lower is better) Translates to: STGLQLSAGLSSLWTSSLLGIST*CLQDSA Trigger: AGCGCTATCCTGAAGGCATCAAGTGGAAATTCCTAG...AAGACTGGAAGTCCAAAGAGATGAAAGTCCGGCAGAGAGCTGTAGCCCTGTACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000681113.1 |
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| 3UTR CAA 90 bp | ATGGAACCTTGGATGTTCTCTGTCCAGGAAACCAGCCAAGTAACCTaGTTATCATGCCGGACTTCTTTCCACTTATGTCCTGGAGGAGGA | + |
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Preference number: 2 (lower is better) Translates to: MEPWMFSVQETSQVT*LSCRTSFHLCPGGG Trigger: TCCTCCTCCAGGACATAAGTGGAAAGAAGTCCGGCATGATAACAAGGTTACTTGGCTGGTTTCCTGGACAGAGAACATCCAAGGTTCCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000681113.1 |
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| 3UTR-3UTR CCA 90 bp | CTCATCTGTTTCCGAGCTTCCGTCTGGGCTTTGAAATACTGGCTCATCTGGGTAAAGAGGCTCATATGGTaGGGCAAATACTGGACCTTT | + |
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Preference number: 2 (lower is better) Translates to: LICFRASVWALKYWLIWVKRLIW*GKYWTF Trigger: AAAGGTCCAGTATTTGCCCCACCATATGAGCCTCTT...TACCCAGATGAGCCAGTATTTCAAAGCCCAGACGGAAGCTCGGAAACAGATGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000681113.1 |
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| 3UTR-3UTR CCA 90 bp | AGCTTGTCGATGAAGTACAGGGCTACAGCTCTCTGCCGGACTTTCATCTCTTTGACCTGGGTCATTCTCTaGAGACTATGCCAGTTAATT | + |
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Preference number: 2 (lower is better) Translates to: SLSMKYRATALCRTFISLTWVIL*RLCQLI Trigger: AATTAACTGGCATAGTCTCCAGAGAATGACCCAGGT...CAAAGAGATGAAAGTCCGGCAGAGAGCTGTAGCCCTGTACTTCATCGACAAGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000681113.1 |
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| 3UTR-3UTR GCA 90 bp | AGTACAGGGCTACAGCTCTCTGCCGGACTTTCATCTCTTTGGACTTCCAGTCTTATGGTCGAGCATTTTTaGAAAGAACGTAGCTACTTC | + |
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Preference number: 2 (lower is better) Translates to: STGLQLSAGLSSLWTSSLMVEHF*KERSYF Trigger: GAAGTAGCTACGTTCTTTGCAAAAATGCTCGACCAT...AAGACTGGAAGTCCAAAGAGATGAAAGTCCGGCAGAGAGCTGTAGCCCTGTACT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000681113.1 |
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| 3UTR-3UTR CCA 90 bp | GACTTTACCTGGGTCATTCTCTGGAGACTATGCCAGTTAATTGTTCCCAGGTGCAAACTTGACATTCTCTaGAAGAGGCTCATATGGTGG | + |
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Preference number: 2 (lower is better) Translates to: DFTWVILWRLCQLIVPRCKLDIL*KRLIWW Trigger: CCACCATATGAGCCTCTTCCAGAGAATGTCAAGTTT...GCACCTGGGAACAATTAACTGGCATAGTCTCCAGAGAATGACCCAGGTAAAGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000681113.1 |
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| 3UTR CAA 90 bp | AGTTTCTCTTCCTTGCTCATCTGTTTCCGAGCTTCCGTCTGGGCTTaGAAATACTGGCTCATCTGGGTAAAATCACATTTGCTTAGGTTG | + |
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Preference number: 2 (lower is better) Translates to: SFSSLLICFRASVWA*KYWLIWVKSHLLRL Trigger: CAACCTAAGCAAATGTGATTTTACCCAGATGAGCCAGTATTTCAAAGCCCAGACGGAAGCTCGGAAACAGATGAGCAAGGAAGAGAAACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000681113.1 |
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| 3UTR CAA 90 bp | TCCGTCTGGGCTTTGAAATACTGGCTCATCTGGGTAAAATCACATTaGCTTAGGTTGGTGATAATATTCTTCTCTTCATTAGTCATTTCC | + |
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Preference number: 2 (lower is better) Translates to: SVWALKYWLIWVKSH*LRLVIIFFSSLVIS Trigger: GGAAATGACTAATGAAGAGAAGAATATTATCACCAACCTAAGCAAATGTGATTTTACCCAGATGAGCCAGTATTTCAAAGCCCAGACGGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000681113.1 |
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| 3UTR-3UTR CAA 90 bp | CATGCCGGACTTCTTTCCACTTATGTCCTGGAGGAGGAGAAGGAACCTTGGCATGCTTCCGTCTGGGCTTaGAAATACTGGCTCATCTGG | + |
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Preference number: 3 (lower is better) Translates to: HAGLLSTYVLEEEKEPWHASVWA*KYWLIW Trigger: CCAGATGAGCCAGTATTTCAAAGCCCAGACGGAAGC...ATGCCAAGGTTCCTTCTCCTCCTCCAGGACATAAGTGGAAAGAAGTCCGGCATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000681113.1 |
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| 3UTR CCA 72 bp | ACAGGGCTACAGCTCTCTGCCGGACTTTCATCTCTTTaGACTTCCAGTCTTCTCGATACTGGTTCCGGATCT | + |
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Preference number: 3 (lower is better) Translates to: TGLQLSAGLSSL*TSSLLDTGSGS Trigger: AGATCCGGAACCAGTATCGAGAAGACTGGAAGTCCAAAGAGATGAAAGTCCGGCAGAGAGCTGTAGCCCTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000681113.1 |
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| 3UTR-3UTR CAA 90 bp | AGTACAGGGCTACAGCTCTCTGCCGGACTTTCATCTCTTTGGACTTCCAGTCTTGGAGGAGAAGGAACCTaGGCATCTTTGCTACAGTTG | + |
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Preference number: 3 (lower is better) Translates to: STGLQLSAGLSSLWTSSLGGEGT*ASLLQL Trigger: CAACTGTAGCAAAGATGCCAAGGTTCCTTCTCCTCC...AAGACTGGAAGTCCAAAGAGATGAAAGTCCGGCAGAGAGCTGTAGCCCTGTACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000681113.1 |
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| 3UTR-3UTR CAA 90 bp | AGCTTGTCGATGAAGTACAGGGCTACAGCTCTCTGCCGGACTTTCATCTCTTTGCAGTCCTTCTCACCCTaGATTCGTGAACTAGGGTTA | + |
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Preference number: 3 (lower is better) Translates to: SLSMKYRATALCRTFISLQSFSP*IRELGL Trigger: TAACCCTAGTTCACGAATCAAGGGTGAGAAGGACTG...CAAAGAGATGAAAGTCCGGCAGAGAGCTGTAGCCCTGTACTTCATCGACAAGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000681113.1 |
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| 3UTR-3UTR CAA 90 bp | AGTACAGGGCTACAGCTCTCTGCCGGACTTTCATCTCTTTGGACTTCCAGTCTTTTCAGTTTCTCTTCCTaGCTCATCTGTTTCCGAGCT | + |
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Preference number: 3 (lower is better) Translates to: STGLQLSAGLSSLWTSSLFSFSS*LICFRA Trigger: AGCTCGGAAACAGATGAGCAAGGAAGAGAAACTGAA...AAGACTGGAAGTCCAAAGAGATGAAAGTCCGGCAGAGAGCTGTAGCCCTGTACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000681113.1 |
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| 3UTR-3UTR CAA 90 bp | AGTACAGGGCTACAGCTCTCTGCCGGACTTTCATCTCTTTGGACTTCCAGTCTTGTATTTAATGGAACCTaGGATGTTCTCTGTCCAGGA | + |
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Preference number: 3 (lower is better) Translates to: STGLQLSAGLSSLWTSSLVFNGT*DVLCPG Trigger: TCCTGGACAGAGAACATCCAAGGTTCCATTAAATAC...AAGACTGGAAGTCCAAAGAGATGAAAGTCCGGCAGAGAGCTGTAGCCCTGTACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000681113.1 |
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| 3UTR-3UTR CAA 90 bp | AGCTTGTCGATGAAGTACAGGGCTACAGCTCTCTGCCGGACTTTCATCTCTTTGGGAACCTTGGCATCTTaGCTACAGTTGATGATTATA | + |
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Preference number: 3 (lower is better) Translates to: SLSMKYRATALCRTFISLGTLAS*LQLMII Trigger: TATAATCATCAACTGTAGCAAAGATGCCAAGGTTCC...CAAAGAGATGAAAGTCCGGCAGAGAGCTGTAGCCCTGTACTTCATCGACAAGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000681113.1 |
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| CDS-3UTR CCA 90 bp | CATGCCGGACTTCTTTCCACTTATGTCCTGGAGGAGGAGAAGGAACCTTGGCATGCAGGCGAGGCGGCGTaGGGGAGACGCAGACGGCGA | + |
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Preference number: 4 (lower is better) Translates to: HAGLLSTYVLEEEKEPWHAGEAA*GRRRRR Trigger: TCGCCGTCTGCGTCTCCCCCACGCCGCCTCGCCTGC...ATGCCAAGGTTCCTTCTCCTCCTCCAGGACATAAGTGGAAAGAAGTCCGGCATG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000681113.1 |
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| CDS-3UTR TCA 90 bp | CATGCCGGACTTCTTTCCACTTATGTCCTGGAGGAGGAGAAGGAACCTTGGCATGCAGGTAAGCGGCGGTaGCTGTGGGCCCGAGACTCC | + |
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Preference number: 4 (lower is better) Translates to: HAGLLSTYVLEEEKEPWHAGKRR*LWARDS Trigger: GGAGTCTCGGGCCCACAGTCACCGCCGCTTACCTGC...ATGCCAAGGTTCCTTCTCCTCCTCCAGGACATAAGTGGAAAGAAGTCCGGCATG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000681113.1 |
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| CDS-3UTR GCA 90 bp | CTCATCTGTTTCCGAGCTTCCGTCTGGGCTTTGAAATACTGGCTCATCTGGGTACCATCTTGGGGTGGTTaGCGCGGCCACGGAAAAGTC | + |
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Preference number: 4 (lower is better) Translates to: LICFRASVWALKYWLIWVPSWGG*RGHGKV Trigger: GACTTTTCCGTGGCCGCGGCAACCACCCCAAGATGG...TACCCAGATGAGCCAGTATTTCAAAGCCCAGACGGAAGCTCGGAAACAGATGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000681113.1 |
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| CDS-3UTR CCA 90 bp | GACTTTACCTGGGTCATTCTCTGGAGACTATGCCAGTTAATTGTTCCCAGGTGCTCAGCATGCCCATCTTaGGGTGGTTGCCGCGGCCAC | + |
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Preference number: 4 (lower is better) Translates to: DFTWVILWRLCQLIVPRCSACPS*GGCRGH Trigger: GTGGCCGCGGCAACCACCCCAAGATGGGCATGCTGA...GCACCTGGGAACAATTAACTGGCATAGTCTCCAGAGAATGACCCAGGTAAAGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000681113.1 |
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| CDS-3UTR TCA 90 bp | GACTTTACCTGGGTCATTCTCTGGAGACTATGCCAGTTAATTGTTCCCAGGTGCGTGCTCCACACGAAGTaGGCAGCAGCCCACAGTGTC | + |
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Preference number: 4 (lower is better) Translates to: DFTWVILWRLCQLIVPRCVLHTK*AAAHSV Trigger: GACACTGTGGGCTGCTGCTCACTTCGTGTGGAGCAC...GCACCTGGGAACAATTAACTGGCATAGTCTCCAGAGAATGACCCAGGTAAAGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000681113.1 |
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| CDS-3UTR CCA 90 bp | AGCTTGTCGATGAAGTACAGGGCTACAGCTCTCTGCCGGACTTTCATCTCTTTGGAATCGTTGTGGAGGTaGTCCCCACTCATGTCGGCC | + |
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Preference number: 4 (lower is better) Translates to: SLSMKYRATALCRTFISLESLWR*SPLMSA Trigger: GGCCGACATGAGTGGGGACCACCTCCACAACGATTC...CAAAGAGATGAAAGTCCGGCAGAGAGCTGTAGCCCTGTACTTCATCGACAAGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000681113.1 |
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| CDS-3UTR CCA 90 bp | GACTTTACCTGGGTCATTCTCTGGAGACTATGCCAGTTAATTGTTCCCAGGTGCAGGACAGGGATGACCTaGGGGAGGCCCAGTCACTCT | + |
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Preference number: 4 (lower is better) Translates to: DFTWVILWRLCQLIVPRCRTGMT*GRPSHS Trigger: AGAGTGACTGGGCCTCCCCCAGGTCATCCCTGTCCT...GCACCTGGGAACAATTAACTGGCATAGTCTCCAGAGAATGACCCAGGTAAAGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000681113.1 |
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| CDS-3UTR TCA 90 bp | CATGCCGGACTTCTTTCCACTTATGTCCTGGAGGAGGAGAAGGAACCTTGGCATGCCTGGGCAACAGAGTaGGACTCCATCATTTCCACT | + |
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Preference number: 4 (lower is better) Translates to: HAGLLSTYVLEEEKEPWHAWATE*DSIIST Trigger: AGTGGAAATGATGGAGTCTCACTCTGTTGCCCAGGC...ATGCCAAGGTTCCTTCTCCTCCTCCAGGACATAAGTGGAAAGAAGTCCGGCATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000681113.1 |
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| CDS-3UTR TCA 90 bp | CATGCCGGACTTCTTTCCACTTATGTCCTGGAGGAGGAGAAGGAACCTTGGCATACTCTGGGTGTAGATTaGTGTGCTCCACACGAAGTG | + |
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Preference number: 4 (lower is better) Translates to: HAGLLSTYVLEEEKEPWHTLGVD*CAPHEV Trigger: CACTTCGTGTGGAGCACATCAATCTACACCCAGAGT...ATGCCAAGGTTCCTTCTCCTCCTCCAGGACATAAGTGGAAAGAAGTCCGGCATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000681113.1 |
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| CDS-3UTR CCA 90 bp | AGTACAGGGCTACAGCTCTCTGCCGGACTTTCATCTCTTTGGACTTCCAGTCTTATCTGGGAATCGTTGTaGAGGTGGTCCCCACTCATG | + |
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Preference number: 4 (lower is better) Translates to: STGLQLSAGLSSLWTSSLIWESL*RWSPLM Trigger: CATGAGTGGGGACCACCTCCACAACGATTCCCAGAT...AAGACTGGAAGTCCAAAGAGATGAAAGTCCGGCAGAGAGCTGTAGCCCTGTACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000681113.1 |
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| 3UTR CAA 72 bp | TACAGGGCTACAGCTCTCTGCCGGACTTTCATCTCTTaGGACTTCCAGTCTTCTCGATACTGGTTCCGGATC | + |
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Preference number: 4 (lower is better) Translates to: YRATALCRTFIS*DFQSSRYWFRI Trigger: GATCCGGAACCAGTATCGAGAAGACTGGAAGTCCAAAGAGATGAAAGTCCGGCAGAGAGCTGTAGCCCTGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000681113.1 |
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| CDS-3UTR TCA 90 bp | GACTTTACCTGGGTCATTCTCTGGAGACTATGCCAGTTAATTGTTCCCAGGTGCGAGCAAGCTTGTCGATaGAGTACAGGGCTACAGCTC | + |
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Preference number: 4 (lower is better) Translates to: DFTWVILWRLCQLIVPRCEQACR*STGLQL Trigger: GAGCTGTAGCCCTGTACTTCATCGACAAGCTTGCTC...GCACCTGGGAACAATTAACTGGCATAGTCTCCAGAGAATGACCCAGGTAAAGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000681113.1 |
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| CDS-3UTR TCA 90 bp | AGCTTGTCGATGAAGTACAGGGCTACAGCTCTCTGCCGGACTTTCATCTCTTTGTGGGGCTCAGCTTCATaGCTTTACCTGGGTCATTCT | + |
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Preference number: 4 (lower is better) Translates to: SLSMKYRATALCRTFISLWGSAS*LYLGHS Trigger: AGAATGACCCAGGTAAAGTCATGAAGCTGAGCCCCA...CAAAGAGATGAAAGTCCGGCAGAGAGCTGTAGCCCTGTACTTCATCGACAAGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000681113.1 |
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| CDS-3UTR GCA 90 bp | AGTACAGGGCTACAGCTCTCTGCCGGACTTTCATCTCTTTGGACTTCCAGTCTTAGGGCTACAGCTCTCTaGCGGACTTTCATCTCTTTG | + |
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Preference number: 4 (lower is better) Translates to: STGLQLSAGLSSLWTSSLRATAL*RTFISL Trigger: CAAAGAGATGAAAGTCCGGCAGAGAGCTGTAGCCCT...AAGACTGGAAGTCCAAAGAGATGAAAGTCCGGCAGAGAGCTGTAGCCCTGTACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000681113.1 |
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| CDS-3UTR GCA 90 bp | AGTACAGGGCTACAGCTCTCTGCCGGACTTTCATCTCTTTGGACTTCCAGTCTTGGGTGTAGATTGATGTaGTCCACACGAAGTGAGCAG | + |
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Preference number: 4 (lower is better) Translates to: STGLQLSAGLSSLWTSSLGCRLM*STRSEQ Trigger: CTGCTCACTTCGTGTGGAGCACATCAATCTACACCC...AAGACTGGAAGTCCAAAGAGATGAAAGTCCGGCAGAGAGCTGTAGCCCTGTACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000681113.1 |
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| CDS-3UTR CCA 90 bp | AGTACAGGGCTACAGCTCTCTGCCGGACTTTCATCTCTTTGGACTTCCAGTCTTAAATCCGCTTCGATCTaGGAATCGTTGTGGAGGTGG | + |
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Preference number: 4 (lower is better) Translates to: STGLQLSAGLSSLWTSSLKSASI*ESLWRW Trigger: CCACCTCCACAACGATTCCCAGATCGAAGCGGATTT...AAGACTGGAAGTCCAAAGAGATGAAAGTCCGGCAGAGAGCTGTAGCCCTGTACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000681113.1 |
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| CDS-3UTR TCA 90 bp | AGTACAGGGCTACAGCTCTCTGCCGGACTTTCATCTCTTTGGACTTCCAGTCTTTTATATCCTCGGGCATaGTTCGTCTCTTCAGCATGC | + |
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Preference number: 4 (lower is better) Translates to: STGLQLSAGLSSLWTSSLLYPRA*FVSSAC Trigger: GCATGCTGAAGAGACGAATCATGCCCGAGGATATAA...AAGACTGGAAGTCCAAAGAGATGAAAGTCCGGCAGAGAGCTGTAGCCCTGTACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000681113.1 |
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| CDS-3UTR TCA 90 bp | CTCATCTGTTTCCGAGCTTCCGTCTGGGCTTTGAAATACTGGCTCATCTGGGTATCTACCACATATTCCTaGCCATCCAACTCTGGGTGT | + |
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Preference number: 4 (lower is better) Translates to: LICFRASVWALKYWLIWVSTTYS*PSNSGC Trigger: ACACCCAGAGTTGGATGGTCAGGAATATGTGGTAGA...TACCCAGATGAGCCAGTATTTCAAAGCCCAGACGGAAGCTCGGAAACAGATGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000681113.1 |
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| CDS-3UTR TCA 90 bp | AGCTTGTCGATGAAGTACAGGGCTACAGCTCTCTGCCGGACTTTCATCTCTTTGCCTTGTTATAGTATCTaGTGGAGTCCTTCCCGAGGA | + |
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Preference number: 4 (lower is better) Translates to: SLSMKYRATALCRTFISLPCYSI*WSPSRG Trigger: TCCTCGGGAAGGACTCCATCAGATACTATAACAAGG...CAAAGAGATGAAAGTCCGGCAGAGAGCTGTAGCCCTGTACTTCATCGACAAGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000681113.1 |
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| CDS-3UTR TCA 90 bp | AGCTTGTCGATGAAGTACAGGGCTACAGCTCTCTGCCGGACTTTCATCTCTTTGCTGTCAAGCCCTCCATaGGATCCTGAAGATGCTTAT | + |
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Preference number: 4 (lower is better) Translates to: SLSMKYRATALCRTFISLLSSPP*DPEDAY Trigger: ATAAGCATCTTCAGGATCTCATGGAGGGCTTGACAG...CAAAGAGATGAAAGTCCGGCAGAGAGCTGTAGCCCTGTACTTCATCGACAAGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000681113.1 |
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| CDS-3UTR GCA 90 bp | AGTACAGGGCTACAGCTCTCTGCCGGACTTTCATCTCTTTGGACTTCCAGTCTTTGTTCACTGTTGCTATaGTTGGACTTTTCCCGGTCC | + |
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Preference number: 4 (lower is better) Translates to: STGLQLSAGLSSLWTSSLCSLLL*LDFSRS Trigger: GGACCGGGAAAAGTCCAAGCATAGCAACAGTGAACA...AAGACTGGAAGTCCAAAGAGATGAAAGTCCGGCAGAGAGCTGTAGCCCTGTACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000681113.1 |
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| CDS-3UTR GCA 90 bp | AGTACAGGGCTACAGCTCTCTGCCGGACTTTCATCTCTTTGGACTTCCAGTCTTCTCCTTTTCATTGCCTaGTCTCAGAGCAAGCTTGTC | + |
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Preference number: 4 (lower is better) Translates to: STGLQLSAGLSSLWTSSLLLFIA*SQSKLV Trigger: GACAAGCTTGCTCTGAGAGCAGGCAATGAAAAGGAG...AAGACTGGAAGTCCAAAGAGATGAAAGTCCGGCAGAGAGCTGTAGCCCTGTACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000681113.1 |
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| CDS-3UTR CCA 90 bp | AGCTTGTCGATGAAGTACAGGGCTACAGCTCTCTGCCGGACTTTCATCTCTTTGCACTGTTGCTATGCTTaGACTTTTCCCGGTCCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: SLSMKYRATALCRTFISLHCCYA*TFPGPS Trigger: AGAAGGACCGGGAAAAGTCCAAGCATAGCAACAGTG...CAAAGAGATGAAAGTCCGGCAGAGAGCTGTAGCCCTGTACTTCATCGACAAGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000681113.1 |
||
| CDS-3UTR TCA 90 bp | CTCATCTGTTTCCGAGCTTCCGTCTGGGCTTTGAAATACTGGCTCATCTGGGTACTCACCCTTGATTCGTaGACTAGGGTTAAGCATGAT | + |
|
Preference number: 4 (lower is better) Translates to: LICFRASVWALKYWLIWVLTLDS*TRVKHD Trigger: ATCATGCTTAACCCTAGTTCACGAATCAAGGGTGAG...TACCCAGATGAGCCAGTATTTCAAAGCCCAGACGGAAGCTCGGAAACAGATGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000681113.1 |
||
| CDS-3UTR GCA 90 bp | GGGCTACAGCTCTCTGCCGGACTTTCATCTCTTTGGACTTCCAGTCTTCTCGATTTCTTGTGTTCTTTGTaGCGGTGTTCTCGATCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: GLQLSAGLSSLWTSSLLDFLCSL*RCSRSL Trigger: CAAAGATCGAGAACACCGGCACAAAGAACACAAGAA...ATCGAGAAGACTGGAAGTCCAAAGAGATGAAAGTCCGGCAGAGAGCTGTAGCCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000681113.1 |
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| CDS-3UTR GCA 90 bp | CTCATCTGTTTCCGAGCTTCCGTCTGGGCTTTGAAATACTGGCTCATCTGGGTACTCCTTCTTTATTTTTaGATCCCCAGAGGCTCGAAC | + |
|
Preference number: 4 (lower is better) Translates to: LICFRASVWALKYWLIWVLLLYF*IPRGSN Trigger: GTTCGAGCCTCTGGGGATGCAAAAATAAAGAAGGAG...TACCCAGATGAGCCAGTATTTCAAAGCCCAGACGGAAGCTCGGAAACAGATGAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000681113.1 |
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| CDS-3UTR CCA 90 bp | CATGCCGGACTTCTTTCCACTTATGTCCTGGAGGAGGAGAAGGAACCTTGGCATAAACTTGACATTCTCTaGAAGAGGCTCATATGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: HAGLLSTYVLEEEKEPWHKLDIL*KRLIWW Trigger: CCACCATATGAGCCTCTTCCAGAGAATGTCAAGTTT...ATGCCAAGGTTCCTTCTCCTCCTCCAGGACATAAGTGGAAAGAAGTCCGGCATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000681113.1 |
||
| CDS-3UTR CCA 90 bp | GACTTTACCTGGGTCATTCTCTGGAGACTATGCCAGTTAATTGTTCCCAGGTGCCAGTCTTCTCGATACTaGTTCCGGATCTTGTCCACA | + |
|
Preference number: 4 (lower is better) Translates to: DFTWVILWRLCQLIVPRCQSSRY*FRILST Trigger: TGTGGACAAGATCCGGAACCAGTATCGAGAAGACTG...GCACCTGGGAACAATTAACTGGCATAGTCTCCAGAGAATGACCCAGGTAAAGTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000681113.1 |
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| CDS-3UTR CCA 90 bp | GGGCTACAGCTCTCTGCCGGACTTTCATCTCTTTGGACTTCCAGTCTTCTCGATGGACTTTCATCTCTTTaGACTTCCAGTCTTCTCGAT | + |
|
Preference number: 4 (lower is better) Translates to: GLQLSAGLSSLWTSSLLDGLSSL*TSSLLD Trigger: ATCGAGAAGACTGGAAGTCCAAAGAGATGAAAGTCC...ATCGAGAAGACTGGAAGTCCAAAGAGATGAAAGTCCGGCAGAGAGCTGTAGCCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000681113.1 |
||
| CDS-3UTR CCA 90 bp | GGGCTACAGCTCTCTGCCGGACTTTCATCTCTTTGGACTTCCAGTCTTCTCGATCTTCATGACTTTACCTaGGTCATTCTCTGGAGACTA | + |
|
Preference number: 4 (lower is better) Translates to: GLQLSAGLSSLWTSSLLDLHDFT*VILWRL Trigger: TAGTCTCCAGAGAATGACCCAGGTAAAGTCATGAAG...ATCGAGAAGACTGGAAGTCCAAAGAGATGAAAGTCCGGCAGAGAGCTGTAGCCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000681113.1 |
||
| CDS-3UTR GCA 90 bp | CATGCCGGACTTCTTTCCACTTATGTCCTGGAGGAGGAGAAGGAACCTTGGCATCTTTATGTTCACTGTTaGTATGCTTGGACTTTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: HAGLLSTYVLEEEKEPWHLYVHC*YAWTFP Trigger: GGGAAAAGTCCAAGCATAGCAACAGTGAACATAAAG...ATGCCAAGGTTCCTTCTCCTCCTCCAGGACATAAGTGGAAAGAAGTCCGGCATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000681113.1 |
||
| CDS-3UTR GCA 90 bp | CATGCCGGACTTCTTTCCACTTATGTCCTGGAGGAGGAGAAGGAACCTTGGCATATGGTCGAGCATTTTTaGAAAGAACGTAGCTACTTC | + |
|
Preference number: 4 (lower is better) Translates to: HAGLLSTYVLEEEKEPWHMVEHF*KERSYF Trigger: GAAGTAGCTACGTTCTTTGCAAAAATGCTCGACCAT...ATGCCAAGGTTCCTTCTCCTCCTCCAGGACATAAGTGGAAAGAAGTCCGGCATG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000681113.1 |
||
| CDS-3UTR CCA 90 bp | AGTACAGGGCTACAGCTCTCTGCCGGACTTTCATCTCTTTGGACTTCCAGTCTTACCTGGGTCATTCTCTaGAGACTATGCCAGTTAATT | + |
|
Preference number: 4 (lower is better) Translates to: STGLQLSAGLSSLWTSSLTWVIL*RLCQLI Trigger: AATTAACTGGCATAGTCTCCAGAGAATGACCCAGGT...AAGACTGGAAGTCCAAAGAGATGAAAGTCCGGCAGAGAGCTGTAGCCCTGTACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000681113.1 |
||
| CDS-3UTR GCA 90 bp | CTCATCTGTTTCCGAGCTTCCGTCTGGGCTTTGAAATACTGGCTCATCTGGGTAGTAACCTTGTTATCATaGCGGACTTCTTTCCACTTA | + |
|
Preference number: 4 (lower is better) Translates to: LICFRASVWALKYWLIWVVTLLS*RTSFHL Trigger: TAAGTGGAAAGAAGTCCGGCATGATAACAAGGTTAC...TACCCAGATGAGCCAGTATTTCAAAGCCCAGACGGAAGCTCGGAAACAGATGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000681113.1 |
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| 3UTR CAA 72 bp | TGGATGTTCTCTGTCCAGGAAACCAGCCAAGTAACCTaGTTATCATGCCGGACTTCTTTCCACTTATGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: WMFSVQETSQVT*LSCRTSFHLCP Trigger: AGGACATAAGTGGAAAGAAGTCCGGCATGATAACAAGGTTACTTGGCTGGTTTCCTGGACAGAGAACATCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000681113.1 |
||
| CDS-3UTR TCA 90 bp | AGCTTGTCGATGAAGTACAGGGCTACAGCTCTCTGCCGGACTTTCATCTCTTTGGTCTTTATGCTTTTCTaGGCTTCCATCTTTGTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: SLSMKYRATALCRTFISLVFMLF*ASIFVF Trigger: AAACACAAAGATGGAAGCTCAGAAAAGCATAAAGAC...CAAAGAGATGAAAGTCCGGCAGAGAGCTGTAGCCCTGTACTTCATCGACAAGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000681113.1 |
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| CDS-3UTR CCA 90 bp | GGGCTACAGCTCTCTGCCGGACTTTCATCTCTTTGGACTTCCAGTCTTCTCGATTTCATCTTTAATTTGTaGTGGACTAGAGAAGCCATT | + |
|
Preference number: 4 (lower is better) Translates to: GLQLSAGLSSLWTSSLLDFIFNL*WTREAI Trigger: AATGGCTTCTCTAGTCCACCACAAATTAAAGATGAA...ATCGAGAAGACTGGAAGTCCAAAGAGATGAAAGTCCGGCAGAGAGCTGTAGCCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000681113.1 |
||
| CDS-3UTR CCA 90 bp | AGCTTGTCGATGAAGTACAGGGCTACAGCTCTCTGCCGGACTTTCATCTCTTTGTTGGTAGTATATTCATaGTCGAGCATTTTTGCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: SLSMKYRATALCRTFISLLVVYS*SSIFAK Trigger: CTTTGCAAAAATGCTCGACCATGAATATACTACCAA...CAAAGAGATGAAAGTCCGGCAGAGAGCTGTAGCCCTGTACTTCATCGACAAGCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000681113.1 |
||
| CDS-3UTR CCA 90 bp | CTCATCTGTTTCCGAGCTTCCGTCTGGGCTTTGAAATACTGGCTCATCTGGGTAAAATACTGGCTCATCTaGGTAAAATCACATTTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: LICFRASVWALKYWLIWVKYWLI*VKSHLL Trigger: AAGCAAATGTGATTTTACCCAGATGAGCCAGTATTT...TACCCAGATGAGCCAGTATTTCAAAGCCCAGACGGAAGCTCGGAAACAGATGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000681113.1 |
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| CDS-3UTR CCA 90 bp | GACTTTACCTGGGTCATTCTCTGGAGACTATGCCAGTTAATTGTTCCCAGGTGCATCTTTAATTTGTGGTaGACTAGAGAAGCCATTTTC | + |
|
Preference number: 4 (lower is better) Translates to: DFTWVILWRLCQLIVPRCIFNLW*TREAIF Trigger: GAAAATGGCTTCTCTAGTCCACCACAAATTAAAGAT...GCACCTGGGAACAATTAACTGGCATAGTCTCCAGAGAATGACCCAGGTAAAGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000681113.1 |
||
| 3UTR CAA 72 bp | GCTTTGAAATACTGGCTCATCTGGGTAAAATCACATTaGCTTAGGTTGGTGATAATATTCTTCTCTTCATTA | + |
|
Preference number: 4 (lower is better) Translates to: ALKYWLIWVKSH*LRLVIIFFSSL Trigger: TAATGAAGAGAAGAATATTATCACCAACCTAAGCAAATGTGATTTTACCCAGATGAGCCAGTATTTCAAAGC 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000681113.1 |
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| CDS GCA 90 bp | CCGAGACTCCAGAAACGGCTGAGGCTGCTACCACGGCGGCGACGCTaGCTGACTGCCGGGCGGGCGGCGAGAACAGACCCCAGCAGTTGT | + |
|
Preference number: 5 (lower is better) Translates to: PRLQKRLRLLPRRRR*LTAGRAARTDPSSC Trigger: ACAACTGCTGGGGTCTGTTCTCGCCGCCCGCCCGGCAGTCAGGCAGCGTCGCCGCCGTGGTAGCAGCCTCAGCCGTTTCTGGAGTCTCGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000361337.3 |
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| CDS-3UTR CAA 90 bp | CTCATCTGTTTCCGAGCTTCCGTCTGGGCTTTGAAATACTGGCTCATCTGGGTATTCAGCATGCCCATCTaGGGGTGGTTGCCGCGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: LICFRASVWALKYWLIWVFSMPI*GWLPRP Trigger: TGGCCGCGGCAACCACCCCAAGATGGGCATGCTGAA...TACCCAGATGAGCCAGTATTTCAAAGCCCAGACGGAAGCTCGGAAACAGATGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000681113.1 |
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| CDS GCA 90 bp | CTGGAACATGGGTACCATGATGCTGCCTCTTTCAGGGAACCAGGATaGATCCACAGCACAAGGGATGACTGGGGTTCCTGGTGTATCCAA | + |
|
Preference number: 5 (lower is better) Translates to: LEHGYHDAASFREPG*IHSTRDDWGSWCIQ Trigger: TTGGATACACCAGGAACCCCAGTCATCCCTTGTGCTGTGGATGCATCCTGGTTCCCTGAAAGAGGCAGCATCATGGTACCCATGTTCCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000681058.1 ENST00000681884.1 |
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| CDS-3UTR CAA 90 bp | CTCATCTGTTTCCGAGCTTCCGTCTGGGCTTTGAAATACTGGCTCATCTGGGTATCGATCTGGGAATCGTaGTGGAGGTGGTCCCCACTC | + |
|
Preference number: 5 (lower is better) Translates to: LICFRASVWALKYWLIWVSIWES*WRWSPL Trigger: GAGTGGGGACCACCTCCACAACGATTCCCAGATCGA...TACCCAGATGAGCCAGTATTTCAAAGCCCAGACGGAAGCTCGGAAACAGATGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000681113.1 |
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| CDS TCA 90 bp | GACCTAAGGCCACTACTGGTGGGAAGAGAGATGCACCAGAATGCCTaGGTGTTCACCACTGATGCTTTTCAGCAGTTATCCTGCCCAGTG | + |
|
Preference number: 5 (lower is better) Translates to: DLRPLLVGREMHQNA*VFTTDAFQQLSCPV Trigger: CACTGGGCAGGATAACTGCTGAAAAGCATCAGTGGTGAACACTCAGGCATTCTGGTGCATCTCTCTTCCCACCAGTAGTGGCCTTAGGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000681058.1 |
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| CDS TCA 90 bp | TGCACACTAGAGTTTGCGACACACTGCTCTGGAACATGGGTACCATaGTGCTGCCTCTTTCAGGGAACCAGGATGCATCCACAGCACAAG | + |
|
Preference number: 5 (lower is better) Translates to: CTLEFATHCSGTWVP*CCLFQGTRMHPQHK Trigger: CTTGTGCTGTGGATGCATCCTGGTTCCCTGAAAGAGGCAGCATCATGGTACCCATGTTCCAGAGCAGTGTGTCGCAAACTCTAGTGTGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000681058.1 ENST00000681884.1 |
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| CDS-3UTR CAA 90 bp | GGGCTACAGCTCTCTGCCGGACTTTCATCTCTTTGGACTTCCAGTCTTCTCGATGCTCTCAGAGCAAGCTaGTCGATGAAGTACAGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: GLQLSAGLSSLWTSSLLDALRAS*SMKYRA Trigger: AGCCCTGTACTTCATCGACAAGCTTGCTCTGAGAGC...ATCGAGAAGACTGGAAGTCCAAAGAGATGAAAGTCCGGCAGAGAGCTGTAGCCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000681113.1 |
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| CDS-3UTR CAA 90 bp | GACTTTACCTGGGTCATTCTCTGGAGACTATGCCAGTTAATTGTTCCCAGGTGCGGGACACCCCACTTCTaGCACCAAGCCACTGTGATC | + |
|
Preference number: 5 (lower is better) Translates to: DFTWVILWRLCQLIVPRCGTPHF*HQATVI Trigger: GATCACAGTGGCTTGGTGCAAGAAGTGGGGTGTCCC...GCACCTGGGAACAATTAACTGGCATAGTCTCCAGAGAATGACCCAGGTAAAGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000681113.1 |
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| CDS CCA 90 bp | GAAGGCAGTAATTCACTGCTTCAGCTAGCCCATGCCCCACCTCCCTaGCAAGTTCTAAAGGAGTCTAAGAATTCTCCTCCCCAGAGAGTA | + |
|
Preference number: 5 (lower is better) Translates to: EGSNSLLQLAHAPPP*QVLKESKNSPPQRV Trigger: TACTCTCTGGGGAGGAGAATTCTTAGACTCCTTTAGAACTTGCCAGGGAGGTGGGGCATGGGCTAGCTGAAGCAGTGAATTACTGCCTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000681058.1 |
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| CDS-3UTR CAA 90 bp | CATGCCGGACTTCTTTCCACTTATGTCCTGGAGGAGGAGAAGGAACCTTGGCATTCACTGTTGCTATGCTaGGACTTTTCCCGGTCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: HAGLLSTYVLEEEKEPWHSLLLC*DFSRSF Trigger: GAAGGACCGGGAAAAGTCCAAGCATAGCAACAGTGA...ATGCCAAGGTTCCTTCTCCTCCTCCAGGACATAAGTGGAAAGAAGTCCGGCATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000681113.1 |
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| CDS-3UTR CAA 90 bp | GACTTTACCTGGGTCATTCTCTGGAGACTATGCCAGTTAATTGTTCCCAGGTGCCGGTCCTTCTCCTTCTaGTGTTCTTTGTGCCGGTGT | + |
|
Preference number: 5 (lower is better) Translates to: DFTWVILWRLCQLIVPRCRSFSF*CSLCRC Trigger: ACACCGGCACAAAGAACACAAGAAGGAGAAGGACCG...GCACCTGGGAACAATTAACTGGCATAGTCTCCAGAGAATGACCCAGGTAAAGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000681113.1 |
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| CDS-3UTR CAA 90 bp | CTCATCTGTTTCCGAGCTTCCGTCTGGGCTTTGAAATACTGGCTCATCTGGGTAGGAGGAGAAGGAACCTaGGCATCTTTGCTACAGTTG | + |
|
Preference number: 5 (lower is better) Translates to: LICFRASVWALKYWLIWVGGEGT*ASLLQL Trigger: CAACTGTAGCAAAGATGCCAAGGTTCCTTCTCCTCC...TACCCAGATGAGCCAGTATTTCAAAGCCCAGACGGAAGCTCGGAAACAGATGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000681113.1 |
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| CDS-3UTR CAA 90 bp | CATGCCGGACTTCTTTCCACTTATGTCCTGGAGGAGGAGAAGGAACCTTGGCATACCAGCCAAGTAACCTaGTTATCATGCCGGACTTCT | + |
|
Preference number: 5 (lower is better) Translates to: HAGLLSTYVLEEEKEPWHTSQVT*LSCRTS Trigger: AGAAGTCCGGCATGATAACAAGGTTACTTGGCTGGT...ATGCCAAGGTTCCTTCTCCTCCTCCAGGACATAAGTGGAAAGAAGTCCGGCATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000681113.1 |
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| CDS-3UTR CAA 90 bp | GGGCTACAGCTCTCTGCCGGACTTTCATCTCTTTGGACTTCCAGTCTTCTCGATCAGTCCTTCTCACCCTaGATTCGTGAACTAGGGTTA | + |
|
Preference number: 5 (lower is better) Translates to: GLQLSAGLSSLWTSSLLDQSFSP*IRELGL Trigger: TAACCCTAGTTCACGAATCAAGGGTGAGAAGGACTG...ATCGAGAAGACTGGAAGTCCAAAGAGATGAAAGTCCGGCAGAGAGCTGTAGCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000681113.1 |
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| CDS-3UTR CAA 90 bp | GGGCTACAGCTCTCTGCCGGACTTTCATCTCTTTGGACTTCCAGTCTTCTCGATAACTCTGGGTGTAGATaGATGTGCTCCACACGAAGT | + |
|
Preference number: 5 (lower is better) Translates to: GLQLSAGLSSLWTSSLLDNSGCR*MCSTRS Trigger: ACTTCGTGTGGAGCACATCAATCTACACCCAGAGTT...ATCGAGAAGACTGGAAGTCCAAAGAGATGAAAGTCCGGCAGAGAGCTGTAGCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000681113.1 |
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| CDS TCA 90 bp | TGCTGCCTCTTTCAGGGAACCAGGATGCATCCACAGCACAAGGGATaGCTGGGGTTCCTGGTGTATCCAATTGTTTATGTAAAAGCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: CCLFQGTRMHPQHKG*LGFLVYPIVYVKAV Trigger: GACAGCTTTTACATAAACAATTGGATACACCAGGAACCCCAGTCATCCCTTGTGCTGTGGATGCATCCTGGTTCCCTGAAAGAGGCAGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000681058.1 ENST00000681884.1 |
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| CDS-3UTR CAA 90 bp | CATGCCGGACTTCTTTCCACTTATGTCCTGGAGGAGGAGAAGGAACCTTGGCATTTCAGTTTCTCTTCCTaGCTCATCTGTTTCCGAGCT | + |
|
Preference number: 5 (lower is better) Translates to: HAGLLSTYVLEEEKEPWHFSFSS*LICFRA Trigger: AGCTCGGAAACAGATGAGCAAGGAAGAGAAACTGAA...ATGCCAAGGTTCCTTCTCCTCCTCCAGGACATAAGTGGAAAGAAGTCCGGCATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000681113.1 |
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| CDS TCA 90 bp | AAGCTCTTGGTAAGTCCAGACCAGGCCTACGGAATACCTACGCTTTaGGATGGTGCTCTTCAAGGTTCTAGGCCCTTTCTCTTAATTAGG | + |
|
Preference number: 5 (lower is better) Translates to: KLLVSPDQAYGIPTL*DGALQGSRPFLLIR Trigger: CCTAATTAAGAGAAAGGGCCTAGAACCTTGAAGAGCACCATCTCAAAGCGTAGGTATTCCGTAGGCCTGGTCTGGACTTACCAAGAGCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000681058.1 |
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| CDS CCA 90 bp | TTTAACAAGACTTGGATGCACACTAGAGTTTGCGACACACTGCTCTaGAACATGGGTACCATGATGCTGCCTCTTTCAGGGAACCAGGAT | + |
|
Preference number: 5 (lower is better) Translates to: FNKTWMHTRVCDTLL*NMGTMMLPLSGNQD Trigger: ATCCTGGTTCCCTGAAAGAGGCAGCATCATGGTACCCATGTTCCAGAGCAGTGTGTCGCAAACTCTAGTGTGCATCCAAGTCTTGTTAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000681058.1 ENST00000681884.1 |
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| CDS-3UTR CAA 90 bp | GACTTTACCTGGGTCATTCTCTGGAGACTATGCCAGTTAATTGTTCCCAGGTGCTCCTTCTTGTGTTCTTaGTGCCGGTGTTCTCGATCT | + |
|
Preference number: 5 (lower is better) Translates to: DFTWVILWRLCQLIVPRCSFLCS*CRCSRS Trigger: AGATCGAGAACACCGGCACAAAGAACACAAGAAGGA...GCACCTGGGAACAATTAACTGGCATAGTCTCCAGAGAATGACCCAGGTAAAGTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000681113.1 |
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| CDS-3UTR CAA 90 bp | GGGCTACAGCTCTCTGCCGGACTTTCATCTCTTTGGACTTCCAGTCTTCTCGATAGGTTCATCTTTAATTaGTGGTGGACTAGAGAAGCC | + |
|
Preference number: 5 (lower is better) Translates to: GLQLSAGLSSLWTSSLLDRFIFN*WWTREA Trigger: GGCTTCTCTAGTCCACCACAAATTAAAGATGAACCT...ATCGAGAAGACTGGAAGTCCAAAGAGATGAAAGTCCGGCAGAGAGCTGTAGCCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000681113.1 |
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| CDS-3UTR CAA 90 bp | CATGCCGGACTTCTTTCCACTTATGTCCTGGAGGAGGAGAAGGAACCTTGGCATGTATTTAATGGAACCTaGGATGTTCTCTGTCCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: HAGLLSTYVLEEEKEPWHVFNGT*DVLCPG Trigger: TCCTGGACAGAGAACATCCAAGGTTCCATTAAATAC...ATGCCAAGGTTCCTTCTCCTCCTCCAGGACATAAGTGGAAAGAAGTCCGGCATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000681113.1 |
||
| CDS-3UTR CAA 90 bp | GACTTTACCTGGGTCATTCTCTGGAGACTATGCCAGTTAATTGTTCCCAGGTGCCGGACTTTCATCTCTTaGGACTTCCAGTCTTCTCGA | + |
|
Preference number: 5 (lower is better) Translates to: DFTWVILWRLCQLIVPRCRTFIS*DFQSSR Trigger: TCGAGAAGACTGGAAGTCCAAAGAGATGAAAGTCCG...GCACCTGGGAACAATTAACTGGCATAGTCTCCAGAGAATGACCCAGGTAAAGTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000681113.1 |
||
| CDS-3UTR CAA 90 bp | GGGCTACAGCTCTCTGCCGGACTTTCATCTCTTTGGACTTCCAGTCTTCTCGATTCTTTATGTTCACTGTaGCTATGCTTGGACTTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: GLQLSAGLSSLWTSSLLDSLCSL*LCLDFS Trigger: GGAAAAGTCCAAGCATAGCAACAGTGAACATAAAGA...ATCGAGAAGACTGGAAGTCCAAAGAGATGAAAGTCCGGCAGAGAGCTGTAGCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000681113.1 |
||
| CDS-3UTR CAA 90 bp | AGTACAGGGCTACAGCTCTCTGCCGGACTTTCATCTCTTTGGACTTCCAGTCTTCTTCCATCTTTGTGTTaGGTCTTCTCCTTCTCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: STGLQLSAGLSSLWTSSLLPSLC*VFSFSL Trigger: CAAAGAGAAGGAGAAGACCAAACACAAAGATGGAAG...AAGACTGGAAGTCCAAAGAGATGAAAGTCCGGCAGAGAGCTGTAGCCCTGTACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000681113.1 |
||
| CDS-3UTR CAA 90 bp | CTCATCTGTTTCCGAGCTTCCGTCTGGGCTTTGAAATACTGGCTCATCTGGGTATTCGGCTTCTTTTTCTaGTTATCTGGCTCAGGAACT | + |
|
Preference number: 5 (lower is better) Translates to: LICFRASVWALKYWLIWVFGFFF*LSGSGT Trigger: AGTTCCTGAGCCAGATAACAAGAAAAAGAAGCCGAA...TACCCAGATGAGCCAGTATTTCAAAGCCCAGACGGAAGCTCGGAAACAGATGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000681113.1 |
||
| CDS-3UTR CAA 90 bp | AGTACAGGGCTACAGCTCTCTGCCGGACTTTCATCTCTTTGGACTTCCAGTCTTGGAACCTTGGCATCTTaGCTACAGTTGATGATTATA | + |
|
Preference number: 5 (lower is better) Translates to: STGLQLSAGLSSLWTSSLGTLAS*LQLMII Trigger: TATAATCATCAACTGTAGCAAAGATGCCAAGGTTCC...AAGACTGGAAGTCCAAAGAGATGAAAGTCCGGCAGAGAGCTGTAGCCCTGTACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000681113.1 |
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| CDS-3UTR CAA 90 bp | AGTACAGGGCTACAGCTCTCTGCCGGACTTTCATCTCTTTGGACTTCCAGTCTTCGGTGTTCTCGATCTTaGTGTTTATCTTTGTGTTTA | + |
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Preference number: 5 (lower is better) Translates to: STGLQLSAGLSSLWTSSLRCSRS*CLSLCL Trigger: TAAACACAAAGATAAACACAAAGATCGAGAACACCG...AAGACTGGAAGTCCAAAGAGATGAAAGTCCGGCAGAGAGCTGTAGCCCTGTACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000681113.1 |
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| CDS TCA 90 bp | CTGGTCAACAGGTCAAAATGTTTACATAACATAAGCATTTGCCTCTaGGATTATGGAGTCCTGTTAGGCTGCAAACTCCCCAAGATCAGG | + |
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Preference number: 5 (lower is better) Translates to: LVNRSKCLHNISICL*DYGVLLGCKLPKIR Trigger: CCTGATCTTGGGGAGTTTGCAGCCTAACAGGACTCCATAATCTCAGAGGCAAATGCTTATGTTATGTAAACATTTTGACCTGTTGACCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000681058.1 |
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| CDS CCA 90 bp | ATCCCCATTGCCATCATTTGTCTTAAGTCATCGCTGTTTCTTGCCTaGAGTATGCAACAGCTTCCCATTGATCTCTCTACTTCTTGTTTG | + |
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Preference number: 5 (lower is better) Translates to: IPIAIICLKSSLFLA*SMQQLPIDLSTSCL Trigger: CAAACAAGAAGTAGAGAGATCAATGGGAAGCTGTTGCATACTCCAGGCAAGAAACAGCGATGACTTAAGACAAATGATGGCAATGGGGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000680945.1 |
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| CDS-3UTR CAA 90 bp | GACTTTACCTGGGTCATTCTCTGGAGACTATGCCAGTTAATTGTTCCCAGGTGCGTCTTCTCCTTCTCTTaGTGTTTCTTTTCAGAATCT | + |
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Preference number: 5 (lower is better) Translates to: DFTWVILWRLCQLIVPRCVFSFS*CFFSES Trigger: AGATTCTGAAAAGAAACACAAAGAGAAGGAGAAGAC...GCACCTGGGAACAATTAACTGGCATAGTCTCCAGAGAATGACCCAGGTAAAGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000681113.1 |
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| CDS-3UTR CAA 90 bp | GACTTTACCTGGGTCATTCTCTGGAGACTATGCCAGTTAATTGTTCCCAGGTGCTTAGCAATCCTCTCTTaGTGGTTATCCATAATACAG | + |
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Preference number: 5 (lower is better) Translates to: DFTWVILWRLCQLIVPRCLAILS*WLSIIQ Trigger: CTGTATTATGGATAACCACAAAGAGAGGATTGCTAA...GCACCTGGGAACAATTAACTGGCATAGTCTCCAGAGAATGACCCAGGTAAAGTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000681113.1 |
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| CDS GCA 90 bp | CCTACTGAATCCTATACAGAAATTGCATTTTTAACAAGACTTGGATaGACACTAGAGTTTGCGACACACTGCTCTGGAACATGGGTACCA | + |
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Preference number: 5 (lower is better) Translates to: PTESYTEIAFLTRLG*TLEFATHCSGTWVP Trigger: TGGTACCCATGTTCCAGAGCAGTGTGTCGCAAACTCTAGTGTGCATCCAAGTCTTGTTAAAAATGCAATTTCTGTATAGGATTCAGTAGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000681058.1 ENST00000681884.1 |
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| CDS GCA 90 bp | TTGCCATCATTTGTCTTAAGTCATCGCTGTTTCTTGCCTGGAGTATaGAACAGCTTCCCATTGATCTCTCTACTTCTTGTTTGTGTCCAA | + |
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Preference number: 5 (lower is better) Translates to: LPSFVLSHRCFLPGV*NSFPLISLLLVCVQ Trigger: TTGGACACAAACAAGAAGTAGAGAGATCAATGGGAAGCTGTTGCATACTCCAGGCAAGAAACAGCGATGACTTAAGACAAATGATGGCAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000680945.1 |
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| CDS CCA 90 bp | CACAGAATAGGTGACAGATGCCTACCAGCCCTATCTAGAGATGGATaGCAGACTATTAATCCTCGACCATATACTAATACTGTTTCTAGT | + |
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Preference number: 5 (lower is better) Translates to: HRIGDRCLPALSRDG*QTINPRPYTNTVSS Trigger: ACTAGAAACAGTATTAGTATATGGTCGAGGATTAATAGTCTGCCATCCATCTCTAGATAGGGCTGGTAGGCATCTGTCACCTATTCTGTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000681058.1 |
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| CDS TCA 90 bp | TCCTGGGACATCATGATCACAAGCTGGCTCTTATGTTACCAAAACTaGACAGATGAACTAAAGGTCCTGAAATGTGTCCAAAACTCGTTT | + |
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Preference number: 5 (lower is better) Translates to: SWDIMITSWLLCYQN*TDELKVLKCVQNSF Trigger: AAACGAGTTTTGGACACATTTCAGGACCTTTAGTTCATCTGTTCAGTTTTGGTAACATAAGAGCCAGCTTGTGATCATGATGTCCCAGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000681392.1 |
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| CDS TCA 90 bp | CCAAGAATCAAGAACCTTGAAACAACTCACCATCATAATAAAACTTaGCATTCTCTGGAAGAGGCTCATATGGTGGGGCAAATACTGGAC | + |
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Preference number: 5 (lower is better) Translates to: PRIKNLETTHHHNKT*HSLEEAHMVGQILD Trigger: GTCCAGTATTTGCCCCACCATATGAGCCTCTTCCAGAGAATGTCAAGTTTTATTATGATGGTGAGTTGTTTCAAGGTTCTTGATTCTTGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000681058.1 |
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| CDS GCA 90 bp | ATATATCAAAGGCATAGTGTTATGCTACACAGAATAGGTGACAGATaGCTACCAGCCCTATCTAGAGATGGATGGCAGACTATTAATCCT | + |
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Preference number: 5 (lower is better) Translates to: IYQRHSVMLHRIGDR*LPALSRDGWQTINP Trigger: AGGATTAATAGTCTGCCATCCATCTCTAGATAGGGCTGGTAGGCATCTGTCACCTATTCTGTGTAGCATAACACTATGCCTTTGATATAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000681058.1 |
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| CDS GCA 90 bp | TACTACCATTCAAGTGAGGCTTTTCTAATAACTCTTGCGAAGAGTTaGTCCCTAGAAATGAAGTTCAGATCAAAACCTTCAGCTTGTGGA | + |
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Preference number: 5 (lower is better) Translates to: YYHSSEAFLITLAKS*SLEMKFRSKPSACG Trigger: TCCACAAGCTGAAGGTTTTGATCTGAACTTCATTTCTAGGGAGCAACTCTTCGCAAGAGTTATTAGAAAAGCCTCACTTGAATGGTAGTA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000681058.1 |
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| CDS GCA 72 bp | CAGAAACGGCTGAGGCTGCTACCACGGCGGCGACGCTaGCTGACTGCCGGGCGGGCGGCGAGAACAGACCCC | + |
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Preference number: 6 (lower is better) Translates to: QKRLRLLPRRRR*LTAGRAARTDP Trigger: GGGGTCTGTTCTCGCCGCCCGCCCGGCAGTCAGGCAGCGTCGCCGCCGTGGTAGCAGCCTCAGCCGTTTCTG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000361337.3 |
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| CDS CCA 72 bp | CGGAAATCCGCTTCGATCTGGGAATCGTTGTGGAGGTaGTCCCCACTCATGTCGGCCCGGAGGGACGAGCGC | + |
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Preference number: 6 (lower is better) Translates to: RKSASIWESLWR*SPLMSARRDER Trigger: GCGCTCGTCCCTCCGGGCCGACATGAGTGGGGACCACCTCCACAACGATTCCCAGATCGAAGCGGATTTCCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000361337.3 ENST00000681058.1 ENST00000681113.1 |
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| CDS GCA 72 bp | GGGTACCATGATGCTGCCTCTTTCAGGGAACCAGGATaGATCCACAGCACAAGGGATGACTGGGGTTCCTGG | + |
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Preference number: 6 (lower is better) Translates to: GYHDAASFREPG*IHSTRDDWGSW Trigger: CCAGGAACCCCAGTCATCCCTTGTGCTGTGGATGCATCCTGGTTCCCTGAAAGAGGCAGCATCATGGTACCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000681058.1 ENST00000681884.1 |
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| CDS TCA 72 bp | GAGTTTGCGACACACTGCTCTGGAACATGGGTACCATaGTGCTGCCTCTTTCAGGGAACCAGGATGCATCCA | + |
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Preference number: 6 (lower is better) Translates to: EFATHCSGTWVP*CCLFQGTRMHP Trigger: TGGATGCATCCTGGTTCCCTGAAAGAGGCAGCATCATGGTACCCATGTTCCAGAGCAGTGTGTCGCAAACTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000681058.1 ENST00000681884.1 |
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| CDS CCA 72 bp | ACAAGTGGTTCACAGACCAGCAGCATTGGCATCATGTaGGAGTTTAGAAATGCAGAATCCCAGGCCCCCTCC | + |
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Preference number: 6 (lower is better) Translates to: TSGSQTSSIGIM*EFRNAESQAPS Trigger: GGAGGGGGCCTGGGATTCTGCATTTCTAAACTCCCACATGATGCCAATGCTGCTGGTCTGTGAACCACTTGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000681058.1 ENST00000681884.1 |
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| CDS CAA 90 bp | CAGACCCAGCCCTTTAGTGTAAACTACTACCTAGGCCTACAAGCATaGGTGGACCTAAGGCCACTACTGGTGGGAAGAGAGATGCACCAG | + |
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Preference number: 6 (lower is better) Translates to: QTQPFSVNYYLGLQA*VDLRPLLVGREMHQ Trigger: CTGGTGCATCTCTCTTCCCACCAGTAGTGGCCTTAGGTCCACCAATGCTTGTAGGCCTAGGTAGTAGTTTACACTAAAGGGCTGGGTCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000681058.1 |
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| CDS TCA 72 bp | GTAAGTCCAGACCAGGCCTACGGAATACCTACGCTTTaGGATGGTGCTCTTCAAGGTTCTAGGCCCTTTCTC | + |
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Preference number: 6 (lower is better) Translates to: VSPDQAYGIPTL*DGALQGSRPFL Trigger: GAGAAAGGGCCTAGAACCTTGAAGAGCACCATCTCAAAGCGTAGGTATTCCGTAGGCCTGGTCTGGACTTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000681058.1 |
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| CDS TCA 72 bp | TGCCTGTTAATTTCAGCTACTTGGGAGGCTGAGGCATaGGAATCGTTTGAACCTTGGAGGTGGAGGCTGCAG | + |
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Preference number: 6 (lower is better) Translates to: CLLISATWEAEA*ESFEPWRWRLQ Trigger: CTGCAGCCTCCACCTCCAAGGTTCAAACGATTCTCATGCCTCAGCCTCCCAAGTAGCTGAAATTAACAGGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000681058.1 ENST00000681884.1 |
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| CDS CCA 72 bp | ACTTGGATGCACACTAGAGTTTGCGACACACTGCTCTaGAACATGGGTACCATGATGCTGCCTCTTTCAGGG | + |
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Preference number: 6 (lower is better) Translates to: TWMHTRVCDTLL*NMGTMMLPLSG Trigger: CCCTGAAAGAGGCAGCATCATGGTACCCATGTTCCAGAGCAGTGTGTCGCAAACTCTAGTGTGCATCCAAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000681058.1 ENST00000681884.1 |
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| CDS TCA 72 bp | CCACTACTGGTGGGAAGAGAGATGCACCAGAATGCCTaGGTGTTCACCACTGATGCTTTTCAGCAGTTATCC | + |
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Preference number: 6 (lower is better) Translates to: PLLVGREMHQNA*VFTTDAFQQLS Trigger: GGATAACTGCTGAAAAGCATCAGTGGTGAACACTCAGGCATTCTGGTGCATCTCTCTTCCCACCAGTAGTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000681058.1 |
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| CDS CAA 72 bp | CCCTTTAGTGTAAACTACTACCTAGGCCTACAAGCATaGGTGGACCTAAGGCCACTACTGGTGGGAAGAGAG | + |
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Preference number: 6 (lower is better) Translates to: PFSVNYYLGLQA*VDLRPLLVGRE Trigger: CTCTCTTCCCACCAGTAGTGGCCTTAGGTCCACCAATGCTTGTAGGCCTAGGTAGTAGTTTACACTAAAGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000681058.1 |
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| CDS CAA 72 bp | AAAGTGAGGCTTTACCAGCTGAGCATCCTAAAGCTCTaGGTAAGTCCAGACCAGGCCTACGGAATACCTACG | + |
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Preference number: 6 (lower is better) Translates to: KVRLYQLSILKL*VSPDQAYGIPT Trigger: CGTAGGTATTCCGTAGGCCTGGTCTGGACTTACCAAGAGCTTTAGGATGCTCAGCTGGTAAAGCCTCACTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000681058.1 |
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| CDS CAA 72 bp | ACAGGACTAGGGAATCTAGCTTTCCCTCCCATCACTTaGAACCTCAAAGTGAGGCTTTACCAGCTGAGCATC | + |
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Preference number: 6 (lower is better) Translates to: TGLGNLAFPPIT*NLKVRLYQLSI Trigger: GATGCTCAGCTGGTAAAGCCTCACTTTGAGGTTCAAAGTGATGGGAGGGAAAGCTAGATTCCCTAGTCCTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000681058.1 |
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| CDS CAA 90 bp | AGAGAAACCACAGGACTAGGGAATCTAGCTTTCCCTCCCATCACTTaGAACCTCAAAGTGAGGCTTTACCAGCTGAGCATCCTAAAGCTC | + |
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Preference number: 6 (lower is better) Translates to: RETTGLGNLAFPPIT*NLKVRLYQLSILKL Trigger: GAGCTTTAGGATGCTCAGCTGGTAAAGCCTCACTTTGAGGTTCAAAGTGATGGGAGGGAAAGCTAGATTCCCTAGTCCTGTGGTTTCTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000681058.1 |
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| CDS TCA 72 bp | TTTCAGGGAACCAGGATGCATCCACAGCACAAGGGATaGCTGGGGTTCCTGGTGTATCCAATTGTTTATGTA | + |
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Preference number: 6 (lower is better) Translates to: FQGTRMHPQHKG*LGFLVYPIVYV Trigger: TACATAAACAATTGGATACACCAGGAACCCCAGTCATCCCTTGTGCTGTGGATGCATCCTGGTTCCCTGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000681058.1 ENST00000681884.1 |
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| CDS GCA 72 bp | AGGCATAGTGTTATGCTACACAGAATAGGTGACAGATaGCTACCAGCCCTATCTAGAGATGGATGGCAGACT | + |
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Preference number: 6 (lower is better) Translates to: RHSVMLHRIGDR*LPALSRDGWQT Trigger: AGTCTGCCATCCATCTCTAGATAGGGCTGGTAGGCATCTGTCACCTATTCTGTGTAGCATAACACTATGCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000681058.1 |
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| CDS CAA 90 bp | TTAAGTCATCGCTGTTTCTTGCCTGGAGTATGCAACAGCTTCCCATaGATCTCTCTACTTCTTGTTTGTGTCCAATCCAGTCTCCGCAGA | + |
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Preference number: 6 (lower is better) Translates to: LSHRCFLPGVCNSFP*ISLLLVCVQSSLRR Trigger: TCTGCGGAGACTGGATTGGACACAAACAAGAAGTAGAGAGATCAATGGGAAGCTGTTGCATACTCCAGGCAAGAAACAGCGATGACTTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000680945.1 |
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| CDS CAA 90 bp | TGTTCACTGTTGCTATGCTTGGACTTTTCCCGGTCCTTCTCCTTCTaGTGTTCTTTGTGCCGGTGTTCTCGATCTTTGTGTTTATCTTTG | + |
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Preference number: 6 (lower is better) Translates to: CSLLLCLDFSRSFSF*CSLCRCSRSLCLSL Trigger: CAAAGATAAACACAAAGATCGAGAACACCGGCACAAAGAACACAAGAAGGAGAAGGACCGGGAAAAGTCCAAGCATAGCAACAGTGAACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000361337.3 ENST00000681058.1 ENST00000681113.1 |
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| CDS GCA 72 bp | GTCGAGCATTTTTGCAAAGAACGTAGCTACTTCCTCTaGTTTGGGGCTCAGCTTCATGACTTTACCATCATA | + |
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Preference number: 6 (lower is better) Translates to: VEHFCKERSYFL*FGAQLHDFTII Trigger: TATGATGGTAAAGTCATGAAGCTGAGCCCCAAAGCAGAGGAAGTAGCTACGTTCTTTGCAAAAATGCTCGAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000361337.3 |
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| CDS GCA 72 bp | TGCATTTTTAACAAGACTTGGATGCACACTAGAGTTTaGGACACACTGCTCTGGAACATGGGTACCATGATG | + |
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Preference number: 6 (lower is better) Translates to: CIFNKTWMHTRV*DTLLWNMGTMM Trigger: CATCATGGTACCCATGTTCCAGAGCAGTGTGTCGCAAACTCTAGTGTGCATCCAAGTCTTGTTAAAAATGCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000681058.1 ENST00000681884.1 |
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| CDS CCA 72 bp | GGTGACAGATGCCTACCAGCCCTATCTAGAGATGGATaGCAGACTATTAATCCTCGACCATATACTAATACT | + |
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Preference number: 6 (lower is better) Translates to: GDRCLPALSRDG*QTINPRPYTNT Trigger: AGTATTAGTATATGGTCGAGGATTAATAGTCTGCCATCCATCTCTAGATAGGGCTGGTAGGCATCTGTCACC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000681058.1 |
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| CDS CAA 72 bp | TTTGCTATTCAACAAGTGGTTCACAGACCAGCAGCATaGGCATCATGTGGGAGTTTAGAAATGCAGAATCCC | + |
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Preference number: 6 (lower is better) Translates to: FAIQQVVHRPAA*ASCGSLEMQNP Trigger: GGGATTCTGCATTTCTAAACTCCCACATGATGCCAATGCTGCTGGTCTGTGAACCACTTGTTGAATAGCAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000681058.1 ENST00000681884.1 |
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| CDS CAA 72 bp | CCATTGCCATCATTTGTCTTAAGTCATCGCTGTTTCTaGCCTGGAGTATGCAACAGCTTCCCATTGATCTCT | + |
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Preference number: 6 (lower is better) Translates to: PLPSFVLSHRCF*PGVCNSFPLIS Trigger: AGAGATCAATGGGAAGCTGTTGCATACTCCAGGCAAGAAACAGCGATGACTTAAGACAAATGATGGCAATGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000680945.1 |
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| CDS GCA 72 bp | TCTATTAAAAATACAAAACTTAGGTGTGGTGGCACGTaGCTGTTAATTTCAGCTACTTGGGAGGCTGAGGCA | + |
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Preference number: 6 (lower is better) Translates to: SIKNTKLRCGGT*LLISATWEAEA Trigger: TGCCTCAGCCTCCCAAGTAGCTGAAATTAACAGGCACGTGCCACCACACCTAAGTTTTGTATTTTTAATAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000681058.1 ENST00000681884.1 |
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| CDS GCA 72 bp | TTTGTCTTAAGTCATCGCTGTTTCTTGCCTGGAGTATaGAACAGCTTCCCATTGATCTCTCTACTTCTTGTT | + |
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Preference number: 6 (lower is better) Translates to: FVLSHRCFLPGV*NSFPLISLLLV Trigger: AACAAGAAGTAGAGAGATCAATGGGAAGCTGTTGCATACTCCAGGCAAGAAACAGCGATGACTTAAGACAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000680945.1 |
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| CDS TCA 72 bp | CACAAGCTGGCTCTTATGTTACCAAAACTGAACAGATaGACTAAAGGTCCTGAAATGTGTCCAAAACTCGTT | + |
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Preference number: 6 (lower is better) Translates to: HKLALMLPKLNR*TKGPEMCPKLV Trigger: AACGAGTTTTGGACACATTTCAGGACCTTTAGTTCATCTGTTCAGTTTTGGTAACATAAGAGCCAGCTTGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000681392.1 |
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| CDS GCA 72 bp | ATACCCAGGGCTAGCGAATTCTCTTTAATAATGGTTTaGCTTCTCATGGTATATAAAGGTCTGGTGACACAT | + |
|
Preference number: 6 (lower is better) Translates to: IPRASEFSLIMV*LLMVYKGLVTH Trigger: ATGTGTCACCAGACCTTTATATACCATGAGAAGGCAAACCATTATTAAAGAGAATTCGCTAGCCCTGGGTAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000681058.1 |
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| CDS CCA 72 bp | AGAAACCTCTTTTTGAGAATATGTAGCATCAGTTCCTaGGACATCATGATCACAAGCTGGCTCTTATGTTAC | + |
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Preference number: 6 (lower is better) Translates to: RNLFLRICSISS*DIMITSWLLCY Trigger: GTAACATAAGAGCCAGCTTGTGATCATGATGTCCCAGGAACTGATGCTACATATTCTCAAAAAGAGGTTTCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000681392.1 |
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| CDS CAA 72 bp | TTCTTTTCAGAATCTTTATGTTCACTGTTGCTATGCTaGGACTTTTCCCGGTCCTTCTCCTTCTTGTGTTCT | + |
|
Preference number: 6 (lower is better) Translates to: FFSESLCSLLLC*DFSRSFSFLCS Trigger: AGAACACAAGAAGGAGAAGGACCGGGAAAAGTCCAAGCATAGCAACAGTGAACATAAAGATTCTGAAAAGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000361337.3 ENST00000681058.1 ENST00000681113.1 |
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| CDS TCA 72 bp | ATCATGATCACAAGCTGGCTCTTATGTTACCAAAACTaGACAGATGAACTAAAGGTCCTGAAATGTGTCCAA | + |
|
Preference number: 6 (lower is better) Translates to: IMITSWLLCYQN*TDELKVLKCVQ Trigger: TTGGACACATTTCAGGACCTTTAGTTCATCTGTTCAGTTTTGGTAACATAAGAGCCAGCTTGTGATCATGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000681392.1 |
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| CDS GCA 72 bp | TCAAGTGAGGCTTTTCTAATAACTCTTGCGAAGAGTTaGTCCCTAGAAATGAAGTTCAGATCAAAACCTTCA | + |
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Preference number: 6 (lower is better) Translates to: SSEAFLITLAKS*SLEMKFRSKPS Trigger: TGAAGGTTTTGATCTGAACTTCATTTCTAGGGAGCAACTCTTCGCAAGAGTTATTAGAAAAGCCTCACTTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000681058.1 |
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