Pregenerated sensors for TOMM22 (Homo sapiens)
Ensembl gene IDs: ENSG00000100216Ensembl transcript IDs: ENST00000216034.6
Found 37 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AGTCTTAGCTACCCAGGAGGCCAAGTTGGAGGGGAGGTAAGAGGTTaGAGTGAACCCAAACGACACCACTGTACTCCAGTGAGACCTGAT | + |
|
Preference number: 1 (lower is better) Translates to: SLSYPGGQVGGEVRG*SEPKRHHCTPVRPD Trigger: ATCAGGTCTCACTGGAGTACAGTGGTGTCGTTTGGGTTCACTGCAACCTCTTACCTCCCCTCCAACTTGGCCTCCTGGGTAGCTAAGACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000216034.6 |
||
| 3UTR TCA 90 bp | TCTTCTGTAAAATGGGAACAGTACCACCTAGATTGTAGTGTTGGTTaGTCTGATAAACACACAAAAGGCTTACTCTGGCTGGGCGTGGTG | + |
|
Preference number: 1 (lower is better) Translates to: SSVKWEQYHLDCSVG*SDKHTKGLLWLGVV Trigger: CACCACGCCCAGCCAGAGTAAGCCTTTTGTGTGTTTATCAGATCAACCAACACTACAATCTAGGTGGTACTGTTCCCATTTTACAGAAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000216034.6 |
||
| 3UTR-3UTR TCA 90 bp | CTTAGCTACCCAGGAGGCCAAGTTGGAGGGGAGGTAAGAGGTTGCAGTGAACCCTGCTGCTGGTTTAGGTaGGAAAATGTGAGGGGCAGT | + |
|
Preference number: 2 (lower is better) Translates to: LSYPGGQVGGEVRGCSEPCCWFR*ENVRGS Trigger: ACTGCCCCTCACATTTTCTCACCTAAACCAGCAGCA...GGGTTCACTGCAACCTCTTACCTCCCCTCCAACTTGGCCTCCTGGGTAGCTAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000216034.6 |
||
| 3UTR-3UTR GCA 90 bp | CTTAGCTACCCAGGAGGCCAAGTTGGAGGGGAGGTAAGAGGTTGCAGTGAACCCCTGTTTCACATTGTGTaGATGTCCTGCCCCAACAAC | + |
|
Preference number: 2 (lower is better) Translates to: LSYPGGQVGGEVRGCSEPLFHIV*MSCPNN Trigger: GTTGTTGGGGCAGGACATGCACACAATGTGAAACAG...GGGTTCACTGCAACCTCTTACCTCCCCTCCAACTTGGCCTCCTGGGTAGCTAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000216034.6 |
||
| 3UTR-3UTR GCA 90 bp | GCACGGTGGCGTGTACCTGTAGTCTTAGCTACCCAGGAGGCCAAGTTGGAGGGGGGATCTCAAAGTGACTaGCTAAATTCAGGGCAAAGA | + |
|
Preference number: 2 (lower is better) Translates to: ARWRVPVVLATQEAKLEGGSQSD*LNSGQR Trigger: TCTTTGCCCTGAATTTAGGCAGTCACTTTGAGATCC...CCCCTCCAACTTGGCCTCCTGGGTAGCTAAGACTACAGGTACACGCCACCGTGC 53% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENST00000216034.6 |
||
| 3UTR-3UTR CCA 90 bp | CCGAGCGCACAGCAGCAGTGTTCTGTAGCTGGACTGCCTGGATTTGAATCCAGGCTATGGCTGTTAAGATaGAGGTGCTGCTGGTTTAGG | + |
|
Preference number: 2 (lower is better) Translates to: PSAQQQCSVAGLPGFESRLWLLR*RCCWFR Trigger: CCTAAACCAGCAGCACCTCCATCTTAACAGCCATAG...CCTGGATTCAAATCCAGGCAGTCCAGCTACAGAACACTGCTGCTGTGCGCTCGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000216034.6 |
||
| 3UTR-3UTR TCA 90 bp | GCACAGCAGCAGTGTTCTGTAGCTGGACTGCCTGGATTTGAATCCAGGTCTAGCACCACTGTACTCCAGTaGGACCTGATCTCAGGCAAA | + |
|
Preference number: 2 (lower is better) Translates to: AQQQCSVAGLPGFESRSSTTVLQ*DLISGK Trigger: TTTGCCTGAGATCAGGTCTCACTGGAGTACAGTGGT...GCTAGACCTGGATTCAAATCCAGGCAGTCCAGCTACAGAACACTGCTGCTGTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000216034.6 |
||
| 3UTR-3UTR CCA 90 bp | GCACAGCAGCAGTGTTCTGTAGCTGGACTGCCTGGATTTGAATCCAGGTCTAGCATAAAAGAAACTAGCTaGGCACGGTGGCGTGTACCT | + |
|
Preference number: 2 (lower is better) Translates to: AQQQCSVAGLPGFESRSSIKETS*ARWRVP Trigger: AGGTACACGCCACCGTGCCCAGCTAGTTTCTTTTAT...GCTAGACCTGGATTCAAATCCAGGCAGTCCAGCTACAGAACACTGCTGCTGTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000216034.6 |
||
| 3UTR-3UTR TCA 90 bp | CCGAGCGCACAGCAGCAGTGTTCTGTAGCTGGACTGCCTGGATTTGAATCCAGGGGGCAAAGATTGCTATaGAGTACTTGGCTAAAAATG | + |
|
Preference number: 2 (lower is better) Translates to: PSAQQQCSVAGLPGFESRGQRLL*STWLKM Trigger: CATTTTTAGCCAAGTACTTCATAGCAATCTTTGCCC...CCTGGATTCAAATCCAGGCAGTCCAGCTACAGAACACTGCTGCTGTGCGCTCGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000216034.6 |
||
| 3UTR-3UTR CCA 90 bp | CCGAGCGCACAGCAGCAGTGTTCTGTAGCTGGACTGCCTGGATTTGAATCCAGGTACATGTCTCTGACGTaGTCTCATTTCAAGGTACTT | + |
|
Preference number: 2 (lower is better) Translates to: PSAQQQCSVAGLPGFESRYMSLT*SHFKVL Trigger: AAGTACCTTGAAATGAGACCACGTCAGAGACATGTA...CCTGGATTCAAATCCAGGCAGTCCAGCTACAGAACACTGCTGCTGTGCGCTCGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000216034.6 |
||
| 3UTR-3UTR TCA 90 bp | ATTTTCACTTGGAAACAATTTGGGCCTATGGCTGTTAAGATGGAGGTGCTGCTGGGCAGTACATGTCTCTaGCGTGGTCTCATTTCAAGG | + |
|
Preference number: 2 (lower is better) Translates to: IFTWKQFGPMAVKMEVLLGSTCL*RGLISR Trigger: CCTTGAAATGAGACCACGTCAGAGACATGTACTGCC...CAGCAGCACCTCCATCTTAACAGCCATAGGCCCAAATTGTTTCCAAGTGAAAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000216034.6 |
||
| 3UTR-3UTR TCA 90 bp | ATTTTCACTTGGAAACAATTTGGGCCTATGGCTGTTAAGATGGAGGTGCTGCTGTCAAGGTACTTAGGATaGCACTTTCAGTTGGAATCA | + |
|
Preference number: 2 (lower is better) Translates to: IFTWKQFGPMAVKMEVLLSRYLG*HFQLES Trigger: TGATTCCAACTGAAAGTGTCATCCTAAGTACCTTGA...CAGCAGCACCTCCATCTTAACAGCCATAGGCCCAAATTGTTTCCAAGTGAAAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000216034.6 |
||
| 3UTR-3UTR CAA 90 bp | CCGAGCGCACAGCAGCAGTGTTCTGTAGCTGGACTGCCTGGATTTGAATCCAGGTCACTTGGAAACAATTaGGGCCTATGGCTGTTAAGA | + |
|
Preference number: 3 (lower is better) Translates to: PSAQQQCSVAGLPGFESRSLGNN*GLWLLR Trigger: TCTTAACAGCCATAGGCCCAAATTGTTTCCAAGTGA...CCTGGATTCAAATCCAGGCAGTCCAGCTACAGAACACTGCTGCTGTGCGCTCGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000216034.6 |
||
| 3UTR TCA 72 bp | CAAAGTGACTGCCTAAATTCAGGGCAAAGATTGCTATaGAGTACTTGGCTAAAAATGAATTTTCACTTGGAA | + |
|
Preference number: 3 (lower is better) Translates to: QSDCLNSGQRLL*STWLKMNFHLE Trigger: TTCCAAGTGAAAATTCATTTTTAGCCAAGTACTTCATAGCAATCTTTGCCCTGAATTTAGGCAGTCACTTTG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000216034.6 |
||
| CDS-3UTR TCA 90 bp | GCACGGTGGCGTGTACCTGTAGTCTTAGCTACCCAGGAGGCCAAGTTGGAGGGGGGCAGTACATGTCTCTaGCGTGGTCTCATTTCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: ARWRVPVVLATQEAKLEGGSTCL*RGLISR Trigger: CCTTGAAATGAGACCACGTCAGAGACATGTACTGCC...CCCCTCCAACTTGGCCTCCTGGGTAGCTAAGACTACAGGTACACGCCACCGTGC 57% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENST00000216034.6 |
||
| CDS-3UTR TCA 90 bp | GCACGGTGGCGTGTACCTGTAGTCTTAGCTACCCAGGAGGCCAAGTTGGAGGGGACCACTGTACTCCAGTaGGACCTGATCTCAGGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: ARWRVPVVLATQEAKLEGTTVLQ*DLISGK Trigger: TTTGCCTGAGATCAGGTCTCACTGGAGTACAGTGGT...CCCCTCCAACTTGGCCTCCTGGGTAGCTAAGACTACAGGTACACGCCACCGTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000216034.6 |
||
| CDS-3UTR GCA 90 bp | CTTAGCTACCCAGGAGGCCAAGTTGGAGGGGAGGTAAGAGGTTGCAGTGAACCCGGTCCTAGAAGTATCTaGCGCTGCTGCAGTTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LSYPGGQVGGEVRGCSEPGPRSI*RCCSCC Trigger: GCAGCAACTGCAGCAGCGGCAGATACTTCTAGGACC...GGGTTCACTGCAACCTCTTACCTCCCCTCCAACTTGGCCTCCTGGGTAGCTAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000216034.6 |
||
| CDS-3UTR CCA 90 bp | GCACAGCAGCAGTGTTCTGTAGCTGGACTGCCTGGATTTGAATCCAGGTCTAGCGGGAAAGATCAAAAGTaGCTCCGGCCGCGGACCGGA | + |
|
Preference number: 4 (lower is better) Translates to: AQQQCSVAGLPGFESRSSGKDQK*LRPRTG Trigger: TCCGGTCCGCGGCCGGAGCCACTTTTGATCTTTCCC...GCTAGACCTGGATTCAAATCCAGGCAGTCCAGCTACAGAACACTGCTGCTGTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000216034.6 |
||
| CDS-3UTR TCA 90 bp | CCGAGCGCACAGCAGCAGTGTTCTGTAGCTGGACTGCCTGGATTTGAATCCAGGTGCTGCTGGTTTAGGTaGGAAAATGTGAGGGGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: PSAQQQCSVAGLPGFESRCCWFR*ENVRGS Trigger: ACTGCCCCTCACATTTTCTCACCTAAACCAGCAGCA...CCTGGATTCAAATCCAGGCAGTCCAGCTACAGAACACTGCTGCTGTGCGCTCGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000216034.6 |
||
| CDS-3UTR CCA 90 bp | CTTAGCTACCCAGGAGGCCAAGTTGGAGGGGAGGTAAGAGGTTGCAGTGAACCCCTATGGCTGTTAAGATaGAGGTGCTGCTGGTTTAGG | + |
|
Preference number: 4 (lower is better) Translates to: LSYPGGQVGGEVRGCSEPLWLLR*RCCWFR Trigger: CCTAAACCAGCAGCACCTCCATCTTAACAGCCATAG...GGGTTCACTGCAACCTCTTACCTCCCCTCCAACTTGGCCTCCTGGGTAGCTAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000216034.6 |
||
| CDS-3UTR CCA 90 bp | CCGAGCGCACAGCAGCAGTGTTCTGTAGCTGGACTGCCTGGATTTGAATCCAGGATAAAAGAAACTAGCTaGGCACGGTGGCGTGTACCT | + |
|
Preference number: 4 (lower is better) Translates to: PSAQQQCSVAGLPGFESRIKETS*ARWRVP Trigger: AGGTACACGCCACCGTGCCCAGCTAGTTTCTTTTAT...CCTGGATTCAAATCCAGGCAGTCCAGCTACAGAACACTGCTGCTGTGCGCTCGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000216034.6 |
||
| CDS-3UTR CCA 90 bp | GCACGGTGGCGTGTACCTGTAGTCTTAGCTACCCAGGAGGCCAAGTTGGAGGGGTCCTCTTCTGTAAAATaGGAACAGTACCACCTAGAT | + |
|
Preference number: 4 (lower is better) Translates to: ARWRVPVVLATQEAKLEGSSSVK*EQYHLD Trigger: ATCTAGGTGGTACTGTTCCCATTTTACAGAAGAGGA...CCCCTCCAACTTGGCCTCCTGGGTAGCTAAGACTACAGGTACACGCCACCGTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000216034.6 |
||
| CDS-3UTR TCA 90 bp | CTGGATTTGAATCCAGGTCTAGCACTTAACTCTGCAGCCTTGAGCAATTACCTTATAATCCCAGCACTTTaGGGGGCCAGAGGCGGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: LDLNPGLALNSAALSNYLIIPAL*GARGGW Trigger: CCACCCGCCTCTGGCCCCTCAAAGTGCTGGGATTAT...AAGGTAATTGCTCAAGGCTGCAGAGTTAAGTGCTAGACCTGGATTCAAATCCAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000216034.6 |
||
| CDS-3UTR TCA 90 bp | CCGAGCGCACAGCAGCAGTGTTCTGTAGCTGGACTGCCTGGATTTGAATCCAGGTTTGTACCACACTGGTaGCTAGTGTTTTTCCCTAGT | + |
|
Preference number: 4 (lower is better) Translates to: PSAQQQCSVAGLPGFESRFVPHW*LVFFPS Trigger: ACTAGGGAAAAACACTAGTCACCAGTGTGGTACAAA...CCTGGATTCAAATCCAGGCAGTCCAGCTACAGAACACTGCTGCTGTGCGCTCGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000216034.6 |
||
| CDS-3UTR GCA 90 bp | CCGAGCGCACAGCAGCAGTGTTCTGTAGCTGGACTGCCTGGATTTGAATCCAGGGGATCTCAAAGTGACTaGCTAAATTCAGGGCAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: PSAQQQCSVAGLPGFESRGSQSD*LNSGQR Trigger: TCTTTGCCCTGAATTTAGGCAGTCACTTTGAGATCC...CCTGGATTCAAATCCAGGCAGTCCAGCTACAGAACACTGCTGCTGTGCGCTCGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000216034.6 |
||
| CDS-3UTR CCA 90 bp | ATTTTCACTTGGAAACAATTTGGGCCTATGGCTGTTAAGATGGAGGTGCTGCTGCCCAGGAGGCCAAGTTaGAGGGGAGGTAAGAGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: IFTWKQFGPMAVKMEVLLPRRPS*RGGKRL Trigger: CAACCTCTTACCTCCCCTCCAACTTGGCCTCCTGGG...CAGCAGCACCTCCATCTTAACAGCCATAGGCCCAAATTGTTTCCAAGTGAAAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000216034.6 |
||
| CDS-3UTR TCA 90 bp | GCACAGCAGCAGTGTTCTGTAGCTGGACTGCCTGGATTTGAATCCAGGTCTAGCGGGCAAAGATTGCTATaGAGTACTTGGCTAAAAATG | + |
|
Preference number: 4 (lower is better) Translates to: AQQQCSVAGLPGFESRSSGQRLL*STWLKM Trigger: CATTTTTAGCCAAGTACTTCATAGCAATCTTTGCCC...GCTAGACCTGGATTCAAATCCAGGCAGTCCAGCTACAGAACACTGCTGCTGTGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000216034.6 |
||
| CDS-3UTR CCA 90 bp | GCACAGCAGCAGTGTTCTGTAGCTGGACTGCCTGGATTTGAATCCAGGTCTAGCTACATGTCTCTGACGTaGTCTCATTTCAAGGTACTT | + |
|
Preference number: 4 (lower is better) Translates to: AQQQCSVAGLPGFESRSSYMSLT*SHFKVL Trigger: AAGTACCTTGAAATGAGACCACGTCAGAGACATGTA...GCTAGACCTGGATTCAAATCCAGGCAGTCCAGCTACAGAACACTGCTGCTGTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000216034.6 |
||
| CDS-3UTR CCA 90 bp | ATTTTCACTTGGAAACAATTTGGGCCTATGGCTGTTAAGATGGAGGTGCTGCTGACTAGCTGGGCACGGTaGCGTGTACCTGTAGTCTTA | + |
|
Preference number: 4 (lower is better) Translates to: IFTWKQFGPMAVKMEVLLTSWAR*RVPVVL Trigger: TAAGACTACAGGTACACGCCACCGTGCCCAGCTAGT...CAGCAGCACCTCCATCTTAACAGCCATAGGCCCAAATTGTTTCCAAGTGAAAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000216034.6 |
||
| CDS-3UTR CCA 90 bp | CTGGATTTGAATCCAGGTCTAGCACTTAACTCTGCAGCCTTGAGCAATTACCTTGAGTTCAAGACTATCTaGGGCAACAAGGCGAAACCC | + |
|
Preference number: 4 (lower is better) Translates to: LDLNPGLALNSAALSNYLEFKTI*GNKAKP Trigger: GGGTTTCGCCTTGTTGCCCCAGATAGTCTTGAACTC...AAGGTAATTGCTCAAGGCTGCAGAGTTAAGTGCTAGACCTGGATTCAAATCCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000216034.6 |
||
| CDS-3UTR CCA 90 bp | CTGGATTTGAATCCAGGTCTAGCACTTAACTCTGCAGCCTTGAGCAATTACCTTAACAATTTGGGCCTATaGCTGTTAAGATGGAGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: LDLNPGLALNSAALSNYLNNLGL*LLRWRC Trigger: GCACCTCCATCTTAACAGCCATAGGCCCAAATTGTT...AAGGTAATTGCTCAAGGCTGCAGAGTTAAGTGCTAGACCTGGATTCAAATCCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000216034.6 |
||
| CDS-3UTR TCA 90 bp | CTGGATTTGAATCCAGGTCTAGCACTTAACTCTGCAGCCTTGAGCAATTACCTTTCAAGGTACTTAGGATaGCACTTTCAGTTGGAATCA | + |
|
Preference number: 4 (lower is better) Translates to: LDLNPGLALNSAALSNYLSRYLG*HFQLES Trigger: TGATTCCAACTGAAAGTGTCATCCTAAGTACCTTGA...AAGGTAATTGCTCAAGGCTGCAGAGTTAAGTGCTAGACCTGGATTCAAATCCAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000216034.6 |
||
| CDS-3UTR TCA 90 bp | ATTTTCACTTGGAAACAATTTGGGCCTATGGCTGTTAAGATGGAGGTGCTGCTGTCCCTAGTTAACAAGTaGAAGATCATGTATACCCAG | + |
|
Preference number: 4 (lower is better) Translates to: IFTWKQFGPMAVKMEVLLSLVNK*KIMYTQ Trigger: CTGGGTATACATGATCTTTCACTTGTTAACTAGGGA...CAGCAGCACCTCCATCTTAACAGCCATAGGCCCAAATTGTTTCCAAGTGAAAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000216034.6 |
||
| CDS-3UTR CAA 90 bp | GCACGGTGGCGTGTACCTGTAGTCTTAGCTACCCAGGAGGCCAAGTTGGAGGGGTATAATCCCAGCACTTaGAGGGGCCAGAGGCGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: ARWRVPVVLATQEAKLEGYNPST*RGQRRV Trigger: CACCCGCCTCTGGCCCCTCAAAGTGCTGGGATTATA...CCCCTCCAACTTGGCCTCCTGGGTAGCTAAGACTACAGGTACACGCCACCGTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000216034.6 |
||
| CDS-3UTR CAA 90 bp | CTTAGCTACCCAGGAGGCCAAGTTGGAGGGGAGGTAAGAGGTTGCAGTGAACCCCTTAACTCTGCAGCCTaGAGCAATTACCTTTCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: LSYPGGQVGGEVRGCSEPLNSAA*SNYLSV Trigger: CACAGAAAGGTAATTGCTCAAGGCTGCAGAGTTAAG...GGGTTCACTGCAACCTCTTACCTCCCCTCCAACTTGGCCTCCTGGGTAGCTAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000216034.6 |
||
| CDS-3UTR CAA 90 bp | CTTAGCTACCCAGGAGGCCAAGTTGGAGGGGAGGTAAGAGGTTGCAGTGAACCCTCACTTGGAAACAATTaGGGCCTATGGCTGTTAAGA | + |
|
Preference number: 5 (lower is better) Translates to: LSYPGGQVGGEVRGCSEPSLGNN*GLWLLR Trigger: TCTTAACAGCCATAGGCCCAAATTGTTTCCAAGTGA...GGGTTCACTGCAACCTCTTACCTCCCCTCCAACTTGGCCTCCTGGGTAGCTAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000216034.6 |
||
| CDS-3UTR CAA 90 bp | CTGGATTTGAATCCAGGTCTAGCACTTAACTCTGCAGCCTTGAGCAATTACCTTCTGGACTGCCTGGATTaGAATCCAGGTCTAGCACTT | + |
|
Preference number: 5 (lower is better) Translates to: LDLNPGLALNSAALSNYLLDCLD*NPGLAL Trigger: AAGTGCTAGACCTGGATTCAAATCCAGGCAGTCCAG...AAGGTAATTGCTCAAGGCTGCAGAGTTAAGTGCTAGACCTGGATTCAAATCCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000216034.6 |
||