Pregenerated sensors for TOMM20L (Homo sapiens)
Ensembl gene IDs: ENSG00000196860Ensembl transcript IDs: ENST00000360945.7, ENST00000557754.1
Found 27 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | GATACGTTGAAATGTTTTTCAATCAGGATCATCCTCCAAGCAGTCCTGTTCATTATGTCTGCCTCAAATTaGTGGCAAATAAGGGGAATT | + |
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Preference number: 2 (lower is better) Translates to: DTLKCFSIRIILQAVLFIMSASN*WQIRGI Trigger: AATTCCCCTTATTTGCCAGCAATTTGAGGCAGACAT...AATGAACAGGACTGCTTGGAGGATGATCCTGATTGAAAAACATTTCAACGTATC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000557754.1 |
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| CDS-3UTR TCA 90 bp | CTGGCAAATAAGGGGAATTTTGTGCAACAGCATCTCAAATACCTTGGGAGGGAGGCATTGCCGAGGTGTTaGATCCCCATTCTGTGCTCT | + |
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Preference number: 4 (lower is better) Translates to: LANKGNFVQQHLKYLGREALPRC*IPILCS Trigger: AGAGCACAGAATGGGGATTCAACACCTCGGCAATGC...CTCCCTCCCAAGGTATTTGAGATGCTGTTGCACAAAATTCCCCTTATTTGCCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000557754.1 |
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| CDS-3UTR TCA 90 bp | AATTGCTGGCAAATAAGGGGAATTTTGTGCAACAGCATCTCAAATACCTTGGGACGCGCCGCTTCCGGTTaGGGTAAATACAATAGCCCA | + |
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Preference number: 4 (lower is better) Translates to: NCWQIRGILCNSISNTLGRAASG*GKYNSP Trigger: TGGGCTATTGTATTTACCTCAACCGGAAGCGGCGCG...TCCCAAGGTATTTGAGATGCTGTTGCACAAAATTCCCCTTATTTGCCAGCAATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000557754.1 |
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| CDS-3UTR GCA 90 bp | TGGCAAATAAGGGGAATTTTGTGCAACAGCATCTCAAATACCTTGGGAGGGAGAACACTAAAAGGGCATTaGCGAGGTGTTGAATCCCCA | + |
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Preference number: 4 (lower is better) Translates to: WQIRGILCNSISNTLGGRTLKGH*RGVESP Trigger: TGGGGATTCAACACCTCGGCAATGCCCTTTTAGTGT...TCTCCCTCCCAAGGTATTTGAGATGCTGTTGCACAAAATTCCCCTTATTTGCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000557754.1 |
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| CDS-3UTR GCA 90 bp | GTCTGCCTCAAATTGCTGGCAAATAAGGGGAATTTTGTGCAACAGCATCTCAAAAGAAGTTCCCGTGGTTaGTCGCACACTAAAAGGGCA | + |
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Preference number: 4 (lower is better) Translates to: VCLKLLANKGNFVQQHLKRSSRG*SHTKRA Trigger: TGCCCTTTTAGTGTGCGAGCAACCACGGGAACTTCT...TTTGAGATGCTGTTGCACAAAATTCCCCTTATTTGCCAGCAATTTGAGGCAGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000557754.1 |
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| CDS-3UTR GCA 90 bp | CTCAAATTGCTGGCAAATAAGGGGAATTTTGTGCAACAGCATCTCAAATACCTTAGCCTTTTGAGGCTCTaGTCTTCTTTTGTCCCGCAG | + |
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Preference number: 4 (lower is better) Translates to: LKLLANKGNFVQQHLKYLSLLRL*SSFVPQ Trigger: CTGCGGGACAAAAGAAGAGCAGAGCCTCAAAAGGCT...AAGGTATTTGAGATGCTGTTGCACAAAATTCCCCTTATTTGCCAGCAATTTGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000557754.1 |
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| CDS-3UTR GCA 90 bp | GTTTTTCAATCAGGATCATCCTCCAAGCAGTCCTGTTCATTCATGTCTGCCTCACTGTTCATTCATGTCTaGCTCAAATTGCTGGCAAAT | + |
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Preference number: 4 (lower is better) Translates to: VFQSGSSSKQSCSFMSASLFIHV*LKLLAN Trigger: ATTTGCCAGCAATTTGAGGCAGACATGAATGAACAG...TGAGGCAGACATGAATGAACAGGACTGCTTGGAGGATGATCCTGATTGAAAAAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000557754.1 |
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| CDS-3UTR GCA 90 bp | TTTTTCAATCAGGATCATCCTCCAAGCAGTCCTGTTCATTCATGTCTGCCTCAAATGTCTGCCTCAAATTaGTGGCAAATAAGGGGAATT | + |
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Preference number: 4 (lower is better) Translates to: FFNQDHPPSSPVHSCLPQMSASN*WQIRGI Trigger: AATTCCCCTTATTTGCCAGCAATTTGAGGCAGACAT...TTGAGGCAGACATGAATGAACAGGACTGCTTGGAGGATGATCCTGATTGAAAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000557754.1 |
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| CDS-3UTR TCA 90 bp | TCTGCCTCAAATTGCTGGCAAATAAGGGGAATTTTGTGCAACAGCATCTCAAATGGACTGTGGATACGTTaGAATGTTTTTCAATCAGGA | + |
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Preference number: 4 (lower is better) Translates to: SASNCWQIRGILCNSISNGLWIR*NVFQSG Trigger: TCCTGATTGAAAAACATTTCAACGTATCCACAGTCC...ATTTGAGATGCTGTTGCACAAAATTCCCCTTATTTGCCAGCAATTTGAGGCAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000557754.1 |
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| CDS-3UTR CCA 90 bp | AATTGCTGGCAAATAAGGGGAATTTTGTGCAACAGCATCTCAAATACCTTGGGATCTGCCTCAAATTGCTaGCAAATAAGGGGAATTTTG | + |
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Preference number: 4 (lower is better) Translates to: NCWQIRGILCNSISNTLGSASNC*QIRGIL Trigger: CAAAATTCCCCTTATTTGCCAGCAATTTGAGGCAGA...TCCCAAGGTATTTGAGATGCTGTTGCACAAAATTCCCCTTATTTGCCAGCAATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000557754.1 |
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| CDS-3UTR GCA 90 bp | TCTGCCTCAAATTGCTGGCAAATAAGGGGAATTTTGTGCAACAGCATCTCAAATATAAGGGGAATTTTGTaGAACAGCATCTCAAATACC | + |
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Preference number: 4 (lower is better) Translates to: SASNCWQIRGILCNSISNIRGIL*NSISNT Trigger: GGTATTTGAGATGCTGTTGCACAAAATTCCCCTTAT...ATTTGAGATGCTGTTGCACAAAATTCCCCTTATTTGCCAGCAATTTGAGGCAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000557754.1 |
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| CDS TCA 90 bp | AGTTCCCGTGGTTGCTCGCACACTAAAAGGGCATTGCCGAGGTGTTaGATCCCCATTCTGTGCTCTCCTGCGTGCCCTGCTCCTCAGCCT | + |
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Preference number: 5 (lower is better) Translates to: SSRGCSHTKRALPRC*IPILCSPACPAPQP Trigger: AGGCTGAGGAGCAGGGCACGCAGGAGAGCACAGAATGGGGATTCAACACCTCGGCAATGCCCTTTTAGTGTGCGAGCAACCACGGGAACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000557754.1 |
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| CDS GCA 90 bp | AAACTTTCAGAAGTTCCCGTGGTTGCTCGCACACTAAAAGGGCATTaGCGAGGTGTTGAATCCCCATTCTGTGCTCTCCTGCGTGCCCTG | + |
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Preference number: 5 (lower is better) Translates to: KLSEVPVVARTLKGH*RGVESPFCALLRAL Trigger: CAGGGCACGCAGGAGAGCACAGAATGGGGATTCAACACCTCGGCAATGCCCTTTTAGTGTGCGAGCAACCACGGGAACTTCTGAAAGTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000557754.1 |
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| CDS TCA 90 bp | AGTTCCCGTGGTTGCTCGCACACTAAAAGGGCATTGCCGAGGTGTTaGATCCCCATTCTGTGCTCTCCTCTAGATAACCAAAGTTCTCCC | + |
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Preference number: 5 (lower is better) Translates to: SSRGCSHTKRALPRC*IPILCSPLDNQSSP Trigger: GGGAGAACTTTGGTTATCTAGAGGAGAGCACAGAATGGGGATTCAACACCTCGGCAATGCCCTTTTAGTGTGCGAGCAACCACGGGAACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000360945.7 |
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| CDS-3UTR CAA 90 bp | AATGTTTTTCAATCAGGATCATCCTCCAAGCAGTCCTGTTCATTCATGTCTGCCGGCTCTGCTCTTCTTTaGTCCCGCAGGCGGCGCTTG | + |
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Preference number: 5 (lower is better) Translates to: NVFQSGSSSKQSCSFMSAGSALL*SRRRRL Trigger: CAAGCGCCGCCTGCGGGACAAAAGAAGAGCAGAGCC...GGCAGACATGAATGAACAGGACTGCTTGGAGGATGATCCTGATTGAAAAACATT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000557754.1 |
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| CDS-3UTR CAA 90 bp | GTCCTGTTCATTCATGTCTGCCTCAAATTGCTGGCAAATAAGGGGAATTTTGTGGGCATTGCCGAGGTGTaGAATCCCCATTCTGTGCTC | + |
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Preference number: 5 (lower is better) Translates to: VLFIHVCLKLLANKGNFVGIAEV*NPHSVL Trigger: GAGCACAGAATGGGGATTCAACACCTCGGCAATGCC...CACAAAATTCCCCTTATTTGCCAGCAATTTGAGGCAGACATGAATGAACAGGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000557754.1 |
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| CDS GCA 90 bp | GATAACCAAAGTTCTCCCATCCGTACCTCTTGCAAGAAAAGTTCTTaGAACTTTTTATTCTTCGTTGGATCCCACAACTGCGTGCCCTGC | + |
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Preference number: 5 (lower is better) Translates to: DNQSSPIRTSCKKSS*NFLFFVGSHNCVPC Trigger: GCAGGGCACGCAGTTGTGGGATCCAACGAAGAATAAAAAGTTGCAAGAACTTTTCTTGCAAGAGGTACGGATGGGAGAACTTTGGTTATC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000360945.7 |
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| CDS-3UTR CAA 90 bp | GACTGTGGATACGTTGAAATGTTTTTCAATCAGGATCATCCTCCAAGCAGTCCTCTGCTCCTCAGCCTTTaGAGGCTCTGCTCTTCTTTT | + |
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Preference number: 5 (lower is better) Translates to: DCGYVEMFFNQDHPPSSPLLLSL*RLCSSF Trigger: AAAAGAAGAGCAGAGCCTCAAAAGGCTGAGGAGCAG...AGGACTGCTTGGAGGATGATCCTGATTGAAAAACATTTCAACGTATCCACAGTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000557754.1 |
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| CDS-3UTR CAA 90 bp | TTGCTGGCAAATAAGGGGAATTTTGTGCAACAGCATCTCAAATACCTTGGGAGGAGCATCTCAAATACCTaGGGAGGGAGAGTGTGTTTG | + |
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Preference number: 5 (lower is better) Translates to: LLANKGNFVQQHLKYLGRSISNT*GGRVCL Trigger: CAAACACACTCTCCCTCCCAAGGTATTTGAGATGCT...CCTCCCAAGGTATTTGAGATGCTGTTGCACAAAATTCCCCTTATTTGCCAGCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000557754.1 |
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| CDS-3UTR CAA 90 bp | AGGGGAATTTTGTGCAACAGCATCTCAAATACCTTGGGAGGGAGAGTGTGTTTGCATGTCTGCCTCAAATaGCTGGCAAATAAGGGGAAT | + |
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Preference number: 5 (lower is better) Translates to: RGILCNSISNTLGGRVCLHVCLK*LANKGN Trigger: ATTCCCCTTATTTGCCAGCAATTTGAGGCAGACATG...CAAACACACTCTCCCTCCCAAGGTATTTGAGATGCTGTTGCACAAAATTCCCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000557754.1 |
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| CDS GCA 90 bp | CTGTGCTCTCCTCTAGATAACCAAAGTTCTCCCATCCGTACCTCTTaGAAGAAAAGTTCTTGCAACTTTTTATTCTTCGTTGGATCCCAC | + |
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Preference number: 5 (lower is better) Translates to: LCSPLDNQSSPIRTS*KKSSCNFLFFVGSH Trigger: GTGGGATCCAACGAAGAATAAAAAGTTGCAAGAACTTTTCTTGCAAGAGGTACGGATGGGAGAACTTTGGTTATCTAGAGGAGAGCACAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000360945.7 |
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| CDS TCA 72 bp | GGTTGCTCGCACACTAAAAGGGCATTGCCGAGGTGTTaGATCCCCATTCTGTGCTCTCCTGCGTGCCCTGCT | + |
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Preference number: 6 (lower is better) Translates to: GCSHTKRALPRC*IPILCSPACPA Trigger: AGCAGGGCACGCAGGAGAGCACAGAATGGGGATTCAACACCTCGGCAATGCCCTTTTAGTGTGCGAGCAACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000557754.1 |
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| CDS GCA 72 bp | GAAGTTCCCGTGGTTGCTCGCACACTAAAAGGGCATTaGCGAGGTGTTGAATCCCCATTCTGTGCTCTCCTC | + |
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Preference number: 6 (lower is better) Translates to: EVPVVARTLKGH*RGVESPFCALL Trigger: GAGGAGAGCACAGAATGGGGATTCAACACCTCGGCAATGCCCTTTTAGTGTGCGAGCAACCACGGGAACTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000360945.7 |
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| CDS GCA 72 bp | GAAGTTCCCGTGGTTGCTCGCACACTAAAAGGGCATTaGCGAGGTGTTGAATCCCCATTCTGTGCTCTCCTG | + |
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Preference number: 6 (lower is better) Translates to: EVPVVARTLKGH*RGVESPFCALL Trigger: CAGGAGAGCACAGAATGGGGATTCAACACCTCGGCAATGCCCTTTTAGTGTGCGAGCAACCACGGGAACTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000557754.1 |
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| CDS TCA 72 bp | GGTTGCTCGCACACTAAAAGGGCATTGCCGAGGTGTTaGATCCCCATTCTGTGCTCTCCTCTAGATAACCAA | + |
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Preference number: 6 (lower is better) Translates to: GCSHTKRALPRC*IPILCSPLDNQ Trigger: TTGGTTATCTAGAGGAGAGCACAGAATGGGGATTCAACACCTCGGCAATGCCCTTTTAGTGTGCGAGCAACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000360945.7 |
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| CDS TCA 72 bp | TGGTACCATAGTATTCTCACTGGACTGTGGATACGTTaGAATGTTTTTCAATCAGGATCATCCTCCAAGCAG | + |
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Preference number: 6 (lower is better) Translates to: WYHSILTGLWIR*NVFQSGSSSKQ Trigger: CTGCTTGGAGGATGATCCTGATTGAAAAACATTTCAACGTATCCACAGTCCAGTGAGAATACTATGGTACCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000360945.7 |
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| CDS CAA 72 bp | AAGTTCTCCCATCCGTACCTCTTGCAAGAAAAGTTCTaGCAACTTTTTATTCTTCGTTGGATCCCACAACTG | + |
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Preference number: 6 (lower is better) Translates to: KFSHPYLLQEKF*QLFILRWIPQL Trigger: CAGTTGTGGGATCCAACGAAGAATAAAAAGTTGCAAGAACTTTTCTTGCAAGAGGTACGGATGGGAGAACTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000360945.7 |
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