RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TOM1L2 (Homo sapiens)

Ensembl gene IDs: ENSG00000175662

Ensembl transcript IDs: ENST00000318094.14, ENST00000379504.8, ENST00000395739.8, ENST00000468944.1, ENST00000478943.5, ENST00000486413.1, ENST00000535933.5, ENST00000537091.2, ENST00000540946.5, ENST00000542206.5, ENST00000577517.1, ENST00000577794.1, ENST00000579586.1, ENST00000581396.5

Found 1089 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GCTGCCCTCCCAATTGTCCTTGGCCCTCTCCCTGCCCAGGGAGCCTaGAGGGACCCTCGGTGCCAGGCTCGGCTGCTGAGCCAGCTTGGG +
Preference number: 1 (lower is better)
Translates to: AALPIVLGPLPAQGA*RDPRCQARLLSQLG
Trigger: CCCAAGCTGGCTCAGCAGCCGAGCCTGGCACCGAGGGTCCCTGCAGGCTCCCTGGGCAGGGAGAGGGCCAAGGACAATTGGGAGGGCAGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000478943.5
ENST00000581396.5
3UTR GCA 90 bp AGGTCGCTGAGCCAGGCAGAGGTGAGCACAGGGCGGGGCCGGGCGTaGTCTTTCTCCATGGGCGGGTGGAGGAAAGACAGTCCGGGTGGT +
Preference number: 1 (lower is better)
Translates to: RSLSQAEVSTGRGRA*SFSMGGWRKDSPGG
Trigger: ACCACCCGGACTGTCTTTCCTCCACCCGCCCATGGAGAAAGAGCACGCCCGGCCCCGCCCTGTGCTCACCTCTGCCTGGCTCAGCGACCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000478943.5
ENST00000581396.5
3UTR CCA 90 bp CTGACTGCCCGAGGTCGGACCGCCCACCACCCGCAGGCCCAGCTCTaGCAGGGCCTCAGAGACAACCCAAGTCACAACCCAAAGGCAGCC +
Preference number: 1 (lower is better)
Translates to: LTARGRTAHHPQAQL*QGLRDNPSHNPKAA
Trigger: GGCTGCCTTTGGGTTGTGACTTGGGTTGTCTCTGAGGCCCTGCCAGAGCTGGGCCTGCGGGTGGTGGGCGGTCCGACCTCGGGCAGTCAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
3UTR CCA 90 bp TGGCCTCCTGCCAGCCCATACAGGTCCACCACTCCCTGCTGCCCCTaGGGCAGCCAGGCCTCTCCAATGATGCCTGGCAACCAGCTGGCG +
Preference number: 1 (lower is better)
Translates to: WPPASPYRSTTPCCP*GSQASPMMPGNQLA
Trigger: CGCCAGCTGGTTGCCAGGCATCATTGGAGAGGCCTGGCTGCCCCAGGGGCAGCAGGGAGTGGTGGACCTGTATGGGCTGGCAGGAGGCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
3UTR TCA 90 bp AGGCTGGCTCTTCCCTCTGAGGACACTGGGTCTGGGATGCAGTGCTaGGGCTGCGGAGCACTGACTGCCCGAGGTCGGACCGCCCACCAC +
Preference number: 1 (lower is better)
Translates to: RLALPSEDTGSGMQC*GCGALTARGRTAHH
Trigger: GTGGTGGGCGGTCCGACCTCGGGCAGTCAGTGCTCCGCAGCCTCAGCACTGCATCCCAGACCCAGTGTCCTCAGAGGGAAGAGCCAGCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
3UTR GCA 90 bp TGTCGTCTCAGCAGCGTGCCACATGGCCACCATCTGCGGGCTGCCTaGTGCCCTCCCAATTGTCCTTGGCCCTCTCCCTGCCCAGGGAGC +
Preference number: 1 (lower is better)
Translates to: CRLSSVPHGHHLRAA*CPPNCPWPSPCPGS
Trigger: GCTCCCTGGGCAGGGAGAGGGCCAAGGACAATTGGGAGGGCAGCAGGCAGCCCGCAGATGGTGGCCATGTGGCACGCTGCTGAGACGACA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000478943.5
ENST00000581396.5
3UTR CCA 90 bp GTGAGCACAGGGCGGGGCCGGGCGTGCTCTTTCTCCATGGGCGGGTaGAGGAAAGACAGTCCGGGTGGTCTGCTCAGGAAGCACTGCCTG +
Preference number: 1 (lower is better)
Translates to: VSTGRGRACSFSMGG*RKDSPGGLLRKHCL
Trigger: CAGGCAGTGCTTCCTGAGCAGACCACCCGGACTGTCTTTCCTCCACCCGCCCATGGAGAAAGAGCACGCCCGGCCCCGCCCTGTGCTCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000478943.5
ENST00000581396.5
3UTR GCA 90 bp CCATGTCGCTGGTCTCTTCTCCCGTCAAGCCCAGCCCCCTTTCCCTaGTTGGCTGGTGGTCTGGGCCGTCCTGCCAGGTGGGAAGGGCTA +
Preference number: 1 (lower is better)
Translates to: PCRWSLLPSSPAPFP*LAGGLGRPARWEGL
Trigger: TAGCCCTTCCCACCTGGCAGGACGGCCCAGACCACCAGCCAAGCAGGGAAAGGGGGCTGGGCTTGACGGGAGAAGAGACCAGCGACATGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
3UTR GCA 90 bp GCCAGGTGTCTGGCTGGACCAGGGCCTGGGATGACCCGAGTCCCTTaGCCATGGCCAGGAGACACACCAGTGAGGACACGGGATGGGAAT +
Preference number: 1 (lower is better)
Translates to: ARCLAGPGPGMTRVP*PWPGDTPVRTRDGN
Trigger: ATTCCCATCCCGTGTCCTCACTGGTGTGTCTCCTGGCCATGGGCAAGGGACTCGGGTCATCCCAGGCCCTGGTCCAGCCAGACACCTGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
3UTR CCA 90 bp CGGTGGCATTTCCATGGAAACACAGGTGTGCAGGCCGTGTGGAGCTaGGGATGTAGGAGTGGCCAGTGCCCGGTGTCCACGGGGTGCGAG +
Preference number: 1 (lower is better)
Translates to: RWHFHGNTGVQAVWS*GCRSGQCPVSTGCE
Trigger: CTCGCACCCCGTGGACACCGGGCACTGGCCACTCCTACATCCCCAGCTCCACACGGCCTGCACACCTGTGTTTCCATGGAAATGCCACCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000535933.5
ENST00000540946.5
ENST00000581396.5
3UTR CCA 90 bp CTGGTCTCTTCTCCCGTCAAGCCCAGCCCCCTTTCCCTGCTTGGCTaGTGGTCTGGGCCGTCCTGCCAGGTGGGAAGGGCTAACTACACC +
Preference number: 1 (lower is better)
Translates to: LVSSPVKPSPLSLLG*WSGPSCQVGRANYT
Trigger: GGTGTAGTTAGCCCTTCCCACCTGGCAGGACGGCCCAGACCACCAGCCAAGCAGGGAAAGGGGGCTGGGCTTGACGGGAGAAGAGACCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
3UTR CCA 90 bp CCCCTTCCTGGACCAGGCAGCCTAAGGACTGTGCTCCCCAGATGGTaGGGTCTGGGAGCAGAGATCTCAGGACAGGCCATCTCGCCAGGG +
Preference number: 1 (lower is better)
Translates to: PLPGPGSLRTVLPRW*GLGAEISGQAISPG
Trigger: CCCTGGCGAGATGGCCTGTCCTGAGATCTCTGCTCCCAGACCCCACCATCTGGGGAGCACAGTCCTTAGGCTGCCTGGTCCAGGAAGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
3UTR TCA 90 bp AGAGAGGGTATCTGGAAGGAGGGCCAGTGGGGTGGATGGATGCTCTaGGCCTCGGGTGCACTGACCCACCCTCCAGAACCAGCTCTGCCC +
Preference number: 1 (lower is better)
Translates to: REGIWKEGQWGGWML*ASGALTHPPEPALP
Trigger: GGGCAGAGCTGGTTCTGGAGGGTGGGTCAGTGCACCCGAGGCTCAGAGCATCCATCCACCCCACTGGCCCTCCTTCCAGATACCCTCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
3UTR GCA 90 bp AGGCCTGGGAGCAGACACGGTGGCATTTCCATGGAAACACAGGTGTaGAGGCCGTGTGGAGCTGGGGATGTAGGAGTGGCCAGTGCCCGG +
Preference number: 1 (lower is better)
Translates to: RPGSRHGGISMETQV*RPCGAGDVGVASAR
Trigger: CCGGGCACTGGCCACTCCTACATCCCCAGCTCCACACGGCCTGCACACCTGTGTTTCCATGGAAATGCCACCGTGTCTGCTCCCAGGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000535933.5
ENST00000540946.5
ENST00000581396.5
3UTR CCA 90 bp CAGACACGGTGGCATTTCCATGGAAACACAGGTGTGCAGGCCGTGTaGAGCTGGGGATGTAGGAGTGGCCAGTGCCCGGTGTCCACGGGG +
Preference number: 1 (lower is better)
Translates to: QTRWHFHGNTGVQAV*SWGCRSGQCPVSTG
Trigger: CCCCGTGGACACCGGGCACTGGCCACTCCTACATCCCCAGCTCCACACGGCCTGCACACCTGTGTTTCCATGGAAATGCCACCGTGTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000535933.5
ENST00000540946.5
ENST00000581396.5
3UTR CCA 90 bp ACTCTGCCCGCTCTTCCTGGGAGGAAACATGGGCAGAGGGGCCCATaGTGGGAGGGGAGAGAGTCTCTGGCTGCAGTTGTCCCACCACTC +
Preference number: 1 (lower is better)
Translates to: TLPALPGRKHGQRGP*WEGRESLAAVVPPL
Trigger: GAGTGGTGGGACAACTGCAGCCAGAGACTCTCTCCCCTCCCACCATGGGCCCCTCTGCCCATGTTTCCTCCCAGGAAGAGCGGGCAGAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000581396.5
3UTR CCA 90 bp GTCTCTTCTCCCGTCAAGCCCAGCCCCCTTTCCCTGCTTGGCTGGTaGTCTGGGCCGTCCTGCCAGGTGGGAAGGGCTAACTACACCATG +
Preference number: 1 (lower is better)
Translates to: VSSPVKPSPLSLLGW*SGPSCQVGRANYTM
Trigger: CATGGTGTAGTTAGCCCTTCCCACCTGGCAGGACGGCCCAGACCACCAGCCAAGCAGGGAAAGGGGGCTGGGCTTGACGGGAGAAGAGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
3UTR CCA 90 bp TGGCTCCAGGCTAGGAAGGCAGGTGACACTTGTCAGCATGGCCAATaGCCTCCTGCCAGCCCATACAGGTCCACCACTCCCTGCTGCCCC +
Preference number: 1 (lower is better)
Translates to: WLQARKAGDTCQHGQ*PPASPYRSTTPCCP
Trigger: GGGGCAGCAGGGAGTGGTGGACCTGTATGGGCTGGCAGGAGGCCATTGGCCATGCTGACAAGTGTCACCTGCCTTCCTAGCCTGGAGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
3UTR GCA 90 bp AAGCCCAGCCCCCTTTCCCTGCTTGGCTGGTGGTCTGGGCCGTCCTaGCAGGTGGGAAGGGCTAACTACACCATGGATCAGGAACCTGTG +
Preference number: 1 (lower is better)
Translates to: KPSPLSLLGWWSGPS*QVGRANYTMDQEPV
Trigger: CACAGGTTCCTGATCCATGGTGTAGTTAGCCCTTCCCACCTGGCAGGACGGCCCAGACCACCAGCCAAGCAGGGAAAGGGGGCTGGGCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
3UTR CCA 90 bp GCAGGCTACCTCCGGATAGGAGGTGCAAGCAGGCCACCTGAGGGGTaGCTCCAGGCTAGGAAGGCAGGTGACACTTGTCAGCATGGCCAA +
Preference number: 1 (lower is better)
Translates to: AGYLRIGGASRPPEG*LQARKAGDTCQHGQ
Trigger: TTGGCCATGCTGACAAGTGTCACCTGCCTTCCTAGCCTGGAGCCACCCCTCAGGTGGCCTGCTTGCACCTCCTATCCGGAGGTAGCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
3UTR TCA 90 bp AGGAGGGCCAGTGGGGTGGATGGATGCTCTGAGCCTCGGGTGCACTaGCCCACCCTCCAGAACCAGCTCTGCCCACAGAAACACATGACA +
Preference number: 1 (lower is better)
Translates to: RRASGVDGCSEPRVH*PTLQNQLCPQKHMT
Trigger: TGTCATGTGTTTCTGTGGGCAGAGCTGGTTCTGGAGGGTGGGTCAGTGCACCCGAGGCTCAGAGCATCCATCCACCCCACTGGCCCTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
3UTR CCA 90 bp TGTCTGGCTGGACCAGGGCCTGGGATGACCCGAGTCCCTTGCCCATaGCCAGGAGACACACCAGTGAGGACACGGGATGGGAATACATGT +
Preference number: 1 (lower is better)
Translates to: CLAGPGPGMTRVPCP*PGDTPVRTRDGNTC
Trigger: ACATGTATTCCCATCCCGTGTCCTCACTGGTGTGTCTCCTGGCCATGGGCAAGGGACTCGGGTCATCCCAGGCCCTGGTCCAGCCAGACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
3UTR CCA 90 bp CCAGCTGAAGTCGCCATCCTGAATGCTCCCCAACGACCATGTCGCTaGTCTCTTCTCCCGTCAAGCCCAGCCCCCTTTCCCTGCTTGGCT +
Preference number: 1 (lower is better)
Translates to: PAEVAILNAPQRPCR*SLLPSSPAPFPCLA
Trigger: AGCCAAGCAGGGAAAGGGGGCTGGGCTTGACGGGAGAAGAGACCAGCGACATGGTCGTTGGGGAGCATTCAGGATGGCGACTTCAGCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
3UTR GCA 90 bp CTGACCCAGCGAGCTGGGCCCAAGACACACGGGGATGCATACAGCTaGAGTATTCTCCTTCTGAGCAACAGCAGCCTGGTGGGAGGTGTG +
Preference number: 1 (lower is better)
Translates to: LTQRAGPKTHGDAYS*SILLLSNSSLVGGV
Trigger: CACACCTCCCACCAGGCTGCTGTTGCTCAGAAGGAGAATACTGCAGCTGTATGCATCCCCGTGTGTCTTGGGCCCAGCTCGCTGGGTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
3UTR GCA 90 bp CCAGGCCAGCAACAACCCCTTGAGGCTCCAAAGCTCCTTGTCCCATaGACGCTGGTAAGCGAGCCAGTCATTCTCTCAGCCTGGCCACAG +
Preference number: 1 (lower is better)
Translates to: PGQQQPLEAPKLLVP*TLVSEPVILSAWPQ
Trigger: CTGTGGCCAGGCTGAGAGAATGACTGGCTCGCTTACCAGCGTGCATGGGACAAGGAGCTTTGGAGCCTCAAGGGGTTGTTGCTGGCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
3UTR CCA 90 bp GATCTCAGGACAGGCCATCTCGCCAGGGCTAAGTGGAACCCACTCTaGGGCACCGGGGCTATACTTGCTTCCTGTGCAGGCCTCAAGCAA +
Preference number: 1 (lower is better)
Translates to: DLRTGHLARAKWNPL*GTGAILASCAGLKQ
Trigger: TTGCTTGAGGCCTGCACAGGAAGCAAGTATAGCCCCGGTGCCCCAGAGTGGGTTCCACTTAGCCCTGGCGAGATGGCCTGTCCTGAGATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
3UTR CCA 90 bp TCTGGGAGCAGAGATCTCAGGACAGGCCATCTCGCCAGGGCTAAGTaGAACCCACTCTGGGGCACCGGGGCTATACTTGCTTCCTGTGCA +
Preference number: 1 (lower is better)
Translates to: SGSRDLRTGHLARAK*NPLWGTGAILASCA
Trigger: TGCACAGGAAGCAAGTATAGCCCCGGTGCCCCAGAGTGGGTTCCACTTAGCCCTGGCGAGATGGCCTGTCCTGAGATCTCTGCTCCCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
3UTR TCA 90 bp AACACTTCTCTCTGGGTGGGGAAGGCCTACTGTAACCCAAGTGGGTaGGACGTCCCCAAAGCCGACAGTGCAGAAGCTCCCAGGGACCAC +
Preference number: 1 (lower is better)
Translates to: NTSLWVGKAYCNPSG*DVPKADSAEAPRDH
Trigger: GTGGTCCCTGGGAGCTTCTGCACTGTCGGCTTTGGGGACGTCTCACCCACTTGGGTTACAGTAGGCCTTCCCCACCCAGAGAGAAGTGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
3UTR GCA 90 bp CTCTCAGTCACTGGGAACCTCCAAGGATGCCACAAAGCTGTTTGCTaGTGGCTCTTGAGGCAGATGTGTGAGGCTACGGCAGGCCAGGCC +
Preference number: 1 (lower is better)
Translates to: LSVTGNLQGCHKAVC*WLLRQMCEATAGQA
Trigger: GGCCTGGCCTGCCGTAGCCTCACACATCTGCCTCAAGAGCCAGCAGCAAACAGCTTTGTGGCATCCTTGGAGGTTCCCAGTGACTGAGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
3UTR GCA 90 bp GGCCTCTCAGTCACTGGGAACCTCCAAGGATGCCACAAAGCTGTTTaGTGCTGGCTCTTGAGGCAGATGTGTGAGGCTACGGCAGGCCAG +
Preference number: 1 (lower is better)
Translates to: GLSVTGNLQGCHKAV*CWLLRQMCEATAGQ
Trigger: CTGGCCTGCCGTAGCCTCACACATCTGCCTCAAGAGCCAGCAGCAAACAGCTTTGTGGCATCCTTGGAGGTTCCCAGTGACTGAGAGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
3UTR GCA 90 bp CAGGAGCAGACTGACCCAGCGAGCTGGGCCCAAGACACACGGGGATaGATACAGCTGCAGTATTCTCCTTCTGAGCAACAGCAGCCTGGT +
Preference number: 1 (lower is better)
Translates to: QEQTDPASWAQDTRG*IQLQYSPSEQQQPG
Trigger: ACCAGGCTGCTGTTGCTCAGAAGGAGAATACTGCAGCTGTATGCATCCCCGTGTGTCTTGGGCCCAGCTCGCTGGGTCAGTCTGCTCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
3UTR GCA 90 bp AAGGCCCATGGTGCCAGGGGCCCAACTGCACATAGCGCCATTCTCTaGCGCCCAGTGGCCAAAAAGGTAGGCAGGAGGGAATGGTTAGTT +
Preference number: 1 (lower is better)
Translates to: KAHGARGPTAHSAIL*RPVAKKVGRREWLV
Trigger: AACTAACCATTCCCTCCTGCCTACCTTTTTGGCCACTGGGCGGCAGAGAATGGCGCTATGTGCAGTTGGGCCCCTGGCACCATGGGCCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
3UTR CCA 90 bp AGGACAGGGCTAGAATCAGGCTGGCCACTCCACGGAGGAGCTTCCTaGGTGAACCTGAGCAACTGGAGTGAGACATCCCAGCTAGTCCCA +
Preference number: 1 (lower is better)
Translates to: RTGLESGWPLHGGAS*VNLSNWSETSQLVP
Trigger: TGGGACTAGCTGGGATGTCTCACTCCAGTTGCTCAGGTTCACCCAGGAAGCTCCTCCGTGGAGTGGCCAGCCTGATTCTAGCCCTGTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
3UTR CCA 90 bp AGAACCCAATTAGAGAGAGGGTATCTGGAAGGAGGGCCAGTGGGGTaGATGGATGCTCTGAGCCTCGGGTGCACTGACCCACCCTCCAGA +
Preference number: 1 (lower is better)
Translates to: RTQLERGYLEGGPVG*MDALSLGCTDPPSR
Trigger: TCTGGAGGGTGGGTCAGTGCACCCGAGGCTCAGAGCATCCATCCACCCCACTGGCCCTCCTTCCAGATACCCTCTCTCTAATTGGGTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
3UTR TCA 90 bp GTTCCTGTTGGTGCTCAGCATGACCCCCAGCTGAAGTCGCCATCCTaGATGCTCCCCAACGACCATGTCGCTGGTCTCTTCTCCCGTCAA +
Preference number: 1 (lower is better)
Translates to: VPVGAQHDPQLKSPS*MLPNDHVAGLFSRQ
Trigger: TTGACGGGAGAAGAGACCAGCGACATGGTCGTTGGGGAGCATTCAGGATGGCGACTTCAGCTGGGGGTCATGCTGAGCACCAACAGGAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
3UTR TCA 90 bp GGATCAGCTTGGGGAGAGAGTATAAATTGGTGGCCAGAGGACCTCTaGGGTGGGAGGAGGCCAGACTGTCAGGAGAGTCTGTGCAAGGAG +
Preference number: 1 (lower is better)
Translates to: GSAWGESINWWPEDL*GGRRPDCQESLCKE
Trigger: CTCCTTGCACAGACTCTCCTGACAGTCTGGCCTCCTCCCACCTCAGAGGTCCTCTGGCCACCAATTTATACTCTCTCCCCAAGCTGATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
3UTR GCA 90 bp AGCAATACCTCCAGTGCAAGTCCCTCCACAAGCCAGGACCAGGTGTaGGGGTGTGAGCCTGCAGTGTGTGCGTGGCAGTTTGGTTTATTG +
Preference number: 1 (lower is better)
Translates to: SNTSSASPSTSQDQV*GCEPAVCAWQFGLL
Trigger: CAATAAACCAAACTGCCACGCACACACTGCAGGCTCACACCCGCACACCTGGTCCTGGCTTGTGGAGGGACTTGCACTGGAGGTATTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
3UTR CCA 90 bp GGGCTGACAGACAATGTCTCTGGGGTGGAAACACTTCTCTCTGGGTaGGGAAGGCCTACTGTAACCCAAGTGGGTGAGACGTCCCCAAAG +
Preference number: 1 (lower is better)
Translates to: GLTDNVSGVETLLSG*GRPTVTQVGETSPK
Trigger: CTTTGGGGACGTCTCACCCACTTGGGTTACAGTAGGCCTTCCCCACCCAGAGAGAAGTGTTTCCACCCCAGAGACATTGTCTGTCAGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
3UTR TCA 90 bp TGGCATTTGACAGGGAAGGTGGTCTCTGGGACCCGGGCCTGTCACTaGTTATGGGAGGTCTTCCTCCACTCTCCGACTCCTTTAGCTATA +
Preference number: 1 (lower is better)
Translates to: WHLTGKVVSGTRACH*LWEVFLHSPTPLAI
Trigger: TATAGCTAAAGGAGTCGGAGAGTGGAGGAAGACCTCCCATAATCAGTGACAGGCCCGGGTCCCAGAGACCACCTTCCCTGTCAAATGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468944.1
3UTR TCA 90 bp CAAATGCTGATAAGCCAAATGTCACAAGGTGACAAGTCCAAGGAGTaGGACCAGGCCCATGAGTGCAGCACACCCTGCTCTTCCAGAGAT +
Preference number: 1 (lower is better)
Translates to: QMLISQMSQGDKSKE*DQAHECSTPCSSRD
Trigger: ATCTCTGGAAGAGCAGGGTGTGCTGCACTCATGGGCCTGGTCTCACTCCTTGGACTTGTCACCTTGTGACATTTGGCTTATCAGCATTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000478943.5
ENST00000581396.5
3UTR TCA 90 bp GCCTTTAGGCTGAACAGAAAGCTCAAAACATGTACAGTGCCTCCCTaGGATGTAGGAGATTCTCTCTTTTGGAATCAACTCCCTGAATTC +
Preference number: 1 (lower is better)
Translates to: AFRLNRKLKTCTVPP*DVGDSLFWNQLPEF
Trigger: GAATTCAGGGAGTTGATTCCAAAAGAGAGAATCTCCTACATCTCAGGGAGGCACTGTACATGTTTTGAGCTTTCTGTTCAGCCTAAAGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000468944.1
3UTR-3UTR CCA 90 bp TGCAGGCCGTGTGGAGCTGGGGATGTAGGAGTGGCCAGTGCCCGGTGTCCACGGCGGGGACCCGCCATCTaGGGAGGCAAACCACAGAGC +
Preference number: 2 (lower is better)
Translates to: CRPCGAGDVGVASARCPRRGPAI*GGKPQS
Trigger: GCTCTGTGGTTTGCCTCCCCAGATGGCGGGTCCCCG...CCGTGGACACCGGGCACTGGCCACTCCTACATCCCCAGCTCCACACGGCCTGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000535933.5
ENST00000540946.5
ENST00000581396.5
3UTR-3UTR GCA 90 bp GGAGGCCTGGGAGCAGACACGGTGGCATTTCCATGGAAACACAGGTGTGCAGGCCCGGTGTCCACGGGGTaGGAGCGGGGACCCGCCATC +
Preference number: 2 (lower is better)
Translates to: GGLGADTVAFPWKHRCAGPVSTG*ERGPAI
Trigger: GATGGCGGGTCCCCGCTCGCACCCCGTGGACACCGG...GCCTGCACACCTGTGTTTCCATGGAAATGCCACCGTGTCTGCTCCCAGGCCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000535933.5
ENST00000540946.5
ENST00000581396.5
3UTR-3UTR GCA 90 bp GGCCAGACTGTCAGGAGAGTCTGTGCAAGGAGGCCAAGGCCTATGCCAGGGAGCCCTGCCCAGGGAGCCTaGAGGGACCCTCGGTGCCAG +
Preference number: 2 (lower is better)
Translates to: GQTVRRVCARRPRPMPGSPAQGA*RDPRCQ
Trigger: CTGGCACCGAGGGTCCCTGCAGGCTCCCTGGGCAGG...GCTCCCTGGCATAGGCCTTGGCCTCCTTGCACAGACTCTCCTGACAGTCTGGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
3UTR-3UTR CCA 90 bp CAGGTGTGCAGGCCGTGTGGAGCTGGGGATGTAGGAGTGGCCAGTGCCCGGTGTCGGGGACCCGCCATCTaGGGAGGCAAACCACAGAGC +
Preference number: 2 (lower is better)
Translates to: QVCRPCGAGDVGVASARCRGPAI*GGKPQS
Trigger: GCTCTGTGGTTTGCCTCCCCAGATGGCGGGTCCCCG...ACACCGGGCACTGGCCACTCCTACATCCCCAGCTCCACACGGCCTGCACACCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000535933.5
ENST00000540946.5
ENST00000581396.5
3UTR-3UTR CCA 90 bp ACAGGTGTGCAGGCCGTGTGGAGCTGGGGATGTAGGAGTGGCCAGTGCCCGGTGCGGGGACCCGCCATCTaGGGAGGCAAACCACAGAGC +
Preference number: 2 (lower is better)
Translates to: TGVQAVWSWGCRSGQCPVRGPAI*GGKPQS
Trigger: GCTCTGTGGTTTGCCTCCCCAGATGGCGGGTCCCCG...CACCGGGCACTGGCCACTCCTACATCCCCAGCTCCACACGGCCTGCACACCTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000535933.5
ENST00000540946.5
ENST00000581396.5
3UTR-3UTR CCA 90 bp CCAGTGGGGTGGATGGATGCTCTGAGCCTCGGGTGCACTGACCCACCCTCCAGAGGAGGGCTGCTAGCCTaGCACAGGGTCCTGGGTCGG +
Preference number: 2 (lower is better)
Translates to: PVGWMDALSLGCTDPPSRGGLLA*HRVLGR
Trigger: CCGACCCAGGACCCTGTGCCAGGCTAGCAGCCCTCC...TCTGGAGGGTGGGTCAGTGCACCCGAGGCTCAGAGCATCCATCCACCCCACTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
3UTR CAA 90 bp GGCCAGGTGTCTGGCTGGACCAGGGCCTGGGATGACCCGAGTCCCTaGCCCATGGCCAGGAGACACACCAGTGAGGACACGGGATGGGAA +
Preference number: 2 (lower is better)
Translates to: GQVSGWTRAWDDPSP*PMARRHTSEDTGWE
Trigger: TTCCCATCCCGTGTCCTCACTGGTGTGTCTCCTGGCCATGGGCAAGGGACTCGGGTCATCCCAGGCCCTGGTCCAGCCAGACACCTGGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
3UTR-3UTR GCA 90 bp AGCCTGGGCTGGCAGCTGAATGATGGAGAGAGGGTCAAGAAGGTGAGAGACCCCCCGGTGTCCACGGGGTaGGAGCGGGGACCCGCCATC +
Preference number: 2 (lower is better)
Translates to: SLGWQLNDGERVKKVRDPPVSTG*ERGPAI
Trigger: GATGGCGGGTCCCCGCTCGCACCCCGTGGACACCGG...GGGGTCTCTCACCTTCTTGACCCTCTCTCCATCATTCAGCTGCCAGCCCAGGCT
66% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000478943.5
ENST00000581396.5
3UTR-3UTR GCA 90 bp AGACACGGTGGCATTTCCATGGAAACACAGGTGTGCAGGCCGTGTGGAGCTGGGCCGGTGTCCACGGGGTaGGAGCGGGGACCCGCCATC +
Preference number: 2 (lower is better)
Translates to: RHGGISMETQVCRPCGAGPVSTG*ERGPAI
Trigger: GATGGCGGGTCCCCGCTCGCACCCCGTGGACACCGG...CCCAGCTCCACACGGCCTGCACACCTGTGTTTCCATGGAAATGCCACCGTGTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000535933.5
ENST00000540946.5
ENST00000581396.5
3UTR-3UTR GCA 90 bp AGCCTGGGCTGGCAGCTGAATGATGGAGAGAGGGTCAAGAAGGTGAGAGACCCCGGGCGGGGCCGGGCGTaGTCTTTCTCCATGGGCGGG +
Preference number: 2 (lower is better)
Translates to: SLGWQLNDGERVKKVRDPGRGRA*SFSMGG
Trigger: CCCGCCCATGGAGAAAGAGCACGCCCGGCCCCGCCC...GGGGTCTCTCACCTTCTTGACCCTCTCTCCATCATTCAGCTGCCAGCCCAGGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000478943.5
ENST00000581396.5
3UTR-3UTR CCA 90 bp CCGCCCACCACCCGCAGGCCCAGCTCTGGCAGGGCCTCAGAGACAACCCAAGTCTCTGCCCGCTCTTCCTaGGAGGAAACATGGGCAGAG +
Preference number: 2 (lower is better)
Translates to: PPTTRRPSSGRASETTQVSARSS*EETWAE
Trigger: CTCTGCCCATGTTTCCTCCCAGGAAGAGCGGGCAGA...GACTTGGGTTGTCTCTGAGGCCCTGCCAGAGCTGGGCCTGCGGGTGGTGGGCGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
3UTR-3UTR CCA 90 bp GGTGCCAGGGGCCCAACTGCACATAGCGCCATTCTCTGCCGCCCAGTGGCCAAATCAGGAAGCACTGCCTaGGGCTGGGCCACTCTGCCC +
Preference number: 2 (lower is better)
Translates to: GARGPTAHSAILCRPVAKSGSTA*GWATLP
Trigger: GGGCAGAGTGGCCCAGCCCCAGGCAGTGCTTCCTGA...TTTGGCCACTGGGCGGCAGAGAATGGCGCTATGTGCAGTTGGGCCCCTGGCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
3UTR CAA 90 bp TGTCGCTGGTCTCTTCTCCCGTCAAGCCCAGCCCCCTTTCCCTGCTaGGCTGGTGGTCTGGGCCGTCCTGCCAGGTGGGAAGGGCTAACT +
Preference number: 2 (lower is better)
Translates to: CRWSLLPSSPAPFPC*AGGLGRPARWEGLT
Trigger: AGTTAGCCCTTCCCACCTGGCAGGACGGCCCAGACCACCAGCCAAGCAGGGAAAGGGGGCTGGGCTTGACGGGAGAAGAGACCAGCGACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
3UTR-3UTR GCA 90 bp GGTGGCATTTCCATGGAAACACAGGTGTGCAGGCCGTGTGGAGCTGGGGATGTACCGGTGTCCACGGGGTaGGAGCGGGGACCCGCCATC +
Preference number: 2 (lower is better)
Translates to: GGISMETQVCRPCGAGDVPVSTG*ERGPAI
Trigger: GATGGCGGGTCCCCGCTCGCACCCCGTGGACACCGG...TACATCCCCAGCTCCACACGGCCTGCACACCTGTGTTTCCATGGAAATGCCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000535933.5
ENST00000540946.5
ENST00000581396.5
3UTR-3UTR GCA 90 bp CTCAGAGAAAAGAAGTGGCTGAAGCTGGTCCTGACTAGTGGGAGGCCTGGGAGCCCGGTGTCCACGGGGTaGGAGCGGGGACCCGCCATC +
Preference number: 2 (lower is better)
Translates to: LREKKWLKLVLTSGRPGSPVSTG*ERGPAI
Trigger: GATGGCGGGTCCCCGCTCGCACCCCGTGGACACCGG...GCTCCCAGGCCTCCCACTAGTCAGGACCAGCTTCAGCCACTTCTTTTCTCTGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000535933.5
ENST00000581396.5
3UTR-3UTR GCA 90 bp AGAGGGTATCTGGAAGGAGGGCCAGTGGGGTGGATGGATGCTCTGAGCCTCGGGTGTAGGAGTGGCCAGTaGCCGGTGTCCACGGGGTGC +
Preference number: 2 (lower is better)
Translates to: RGYLEGGPVGWMDALSLGCRSGQ*PVSTGC
Trigger: GCACCCCGTGGACACCGGGCACTGGCCACTCCTACA...CCCGAGGCTCAGAGCATCCATCCACCCCACTGGCCCTCCTTCCAGATACCCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
3UTR-3UTR GCA 90 bp GGGGCCGGGCGTGCTCTTTCTCCATGGGCGGGTGGAGGAAAGACAGTCCGGGTGATGGAAACACAGGTGTaGAGGCCGTGTGGAGCTGGG +
Preference number: 2 (lower is better)
Translates to: GAGRALSPWAGGGKTVRVMETQV*RPCGAG
Trigger: CCCAGCTCCACACGGCCTGCACACCTGTGTTTCCAT...CACCCGGACTGTCTTTCCTCCACCCGCCCATGGAGAAAGAGCACGCCCGGCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000478943.5
ENST00000581396.5
3UTR-3UTR GCA 90 bp GGTGCCAGGGGCCCAACTGCACATAGCGCCATTCTCTGCCGCCCAGTGGCCAAACTGCGGGCTGCCTGCTaGCCTCCCAATTGTCCTTGG +
Preference number: 2 (lower is better)
Translates to: GARGPTAHSAILCRPVAKLRAAC*PPNCPW
Trigger: CCAAGGACAATTGGGAGGGCAGCAGGCAGCCCGCAG...TTTGGCCACTGGGCGGCAGAGAATGGCGCTATGTGCAGTTGGGCCCCTGGCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
3UTR-3UTR CCA 90 bp GGGGCCGGGCGTGCTCTTTCTCCATGGGCGGGTGGAGGAAAGACAGTCCGGGTGTCTGCCCGCTCTTCCTaGGAGGAAACATGGGCAGAG +
Preference number: 2 (lower is better)
Translates to: GAGRALSPWAGGGKTVRVSARSS*EETWAE
Trigger: CTCTGCCCATGTTTCCTCCCAGGAAGAGCGGGCAGA...CACCCGGACTGTCTTTCCTCCACCCGCCCATGGAGAAAGAGCACGCCCGGCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000478943.5
ENST00000581396.5
3UTR-3UTR CCA 90 bp CCCATGCACGCTGGTAAGCGAGCCAGTCATTCTCTCAGCCTGGCCACAGATGGCGGAGGGCTGCTAGCCTaGCACAGGGTCCTGGGTCGG +
Preference number: 2 (lower is better)
Translates to: PMHAGKRASHSLSLATDGGGLLA*HRVLGR
Trigger: CCGACCCAGGACCCTGTGCCAGGCTAGCAGCCCTCC...GCCATCTGTGGCCAGGCTGAGAGAATGACTGGCTCGCTTACCAGCGTGCATGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
3UTR-3UTR CCA 90 bp AGAGGGTATCTGGAAGGAGGGCCAGTGGGGTGGATGGATGCTCTGAGCCTCGGGGCTGCTCCCTATGGCTaGTGGCCGCAGGGGAAGCCT +
Preference number: 2 (lower is better)
Translates to: RGYLEGGPVGWMDALSLGAAPYG*WPQGKP
Trigger: AGGCTTCCCCTGCGGCCACCAGCCATAGGGAGCAGC...CCCGAGGCTCAGAGCATCCATCCACCCCACTGGCCCTCCTTCCAGATACCCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
3UTR-3UTR GCA 90 bp GGAGGCCTGGGAGCAGACACGGTGGCATTTCCATGGAAACACAGGTGTGCAGGCTGTAGGAGTGGCCAGTaGCCGGTGTCCACGGGGTGC +
Preference number: 2 (lower is better)
Translates to: GGLGADTVAFPWKHRCAGCRSGQ*PVSTGC
Trigger: GCACCCCGTGGACACCGGGCACTGGCCACTCCTACA...GCCTGCACACCTGTGTTTCCATGGAAATGCCACCGTGTCTGCTCCCAGGCCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000535933.5
ENST00000540946.5
ENST00000581396.5
3UTR-3UTR GCA 90 bp CTGGGCTGGCAGCTGAATGATGGAGAGAGGGTCAAGAAGGTGAGAGACCCCCACGGGGCTGGGCCACTCTaGCCGCTCTTCCTGGGAGGA +
Preference number: 2 (lower is better)
Translates to: LGWQLNDGERVKKVRDPHGAGPL*PLFLGG
Trigger: TCCTCCCAGGAAGAGCGGGCAGAGTGGCCCAGCCCC...GTGGGGGTCTCTCACCTTCTTGACCCTCTCTCCATCATTCAGCTGCCAGCCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000478943.5
ENST00000581396.5
3UTR-3UTR GCA 90 bp CCAGTGGGGTGGATGGATGCTCTGAGCCTCGGGTGCACTGACCCACCCTCCAGATCAGTGCCTGGAGACTaGCCAGGCAGGGCTACTCTG +
Preference number: 2 (lower is better)
Translates to: PVGWMDALSLGCTDPPSRSVPGD*PGRATL
Trigger: CAGAGTAGCCCTGCCTGGGCAGTCTCCAGGCACTGA...TCTGGAGGGTGGGTCAGTGCACCCGAGGCTCAGAGCATCCATCCACCCCACTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
3UTR-3UTR CCA 90 bp CTGAATGCTCCCCAACGACCATGTCGCTGGTCTCTTCTCCCGTCAAGCCCAGCCCGGGGACCCGCCATCTaGGGAGGCAAACCACAGAGC +
Preference number: 2 (lower is better)
Translates to: LNAPQRPCRWSLLPSSPARGPAI*GGKPQS
Trigger: GCTCTGTGGTTTGCCTCCCCAGATGGCGGGTCCCCG...GGCTGGGCTTGACGGGAGAAGAGACCAGCGACATGGTCGTTGGGGAGCATTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
3UTR-3UTR TCA 90 bp CAGAGCAATACCTCCAGTGCAAGTCCCTCCACAAGCCAGGACCAGGTGTGCGGGGTGAGACCAGGCCCATaGGTGCAGCACACCCTGCTC +
Preference number: 2 (lower is better)
Translates to: QSNTSSASPSTSQDQVCGVRPGP*VQHTLL
Trigger: GAGCAGGGTGTGCTGCACTCATGGGCCTGGTCTCAC...CCCGCACACCTGGTCCTGGCTTGTGGAGGGACTTGCACTGGAGGTATTGCTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
3UTR-3UTR TCA 90 bp AGAGGGTATCTGGAAGGAGGGCCAGTGGGGTGGATGGATGCTCTGAGCCTCGGGGCTGGCTCTTCCCTCTaGGGACACTGGGTCTGGGAT +
Preference number: 2 (lower is better)
Translates to: RGYLEGGPVGWMDALSLGAGSSL*GHWVWD
Trigger: ATCCCAGACCCAGTGTCCTCAGAGGGAAGAGCCAGC...CCCGAGGCTCAGAGCATCCATCCACCCCACTGGCCCTCCTTCCAGATACCCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
3UTR-3UTR GCA 90 bp AGTGGGAGGCCTGGGAGCAGACACGGTGGCATTTCCATGGAAACACAGGTGTGCTGTAGGAGTGGCCAGTaGCCGGTGTCCACGGGGTGC +
Preference number: 2 (lower is better)
Translates to: SGRPGSRHGGISMETQVCCRSGQ*PVSTGC
Trigger: GCACCCCGTGGACACCGGGCACTGGCCACTCCTACA...GCACACCTGTGTTTCCATGGAAATGCCACCGTGTCTGCTCCCAGGCCTCCCACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000535933.5
ENST00000540946.5
ENST00000581396.5
3UTR-3UTR GCA 90 bp CAGACACGGTGGCATTTCCATGGAAACACAGGTGTGCAGGCCGTGTGGAGCTGGTGTAGGAGTGGCCAGTaGCCGGTGTCCACGGGGTGC +
Preference number: 2 (lower is better)
Translates to: QTRWHFHGNTGVQAVWSWCRSGQ*PVSTGC
Trigger: GCACCCCGTGGACACCGGGCACTGGCCACTCCTACA...CCAGCTCCACACGGCCTGCACACCTGTGTTTCCATGGAAATGCCACCGTGTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000535933.5
ENST00000540946.5
ENST00000581396.5
3UTR-3UTR GCA 90 bp CCCATGCACGCTGGTAAGCGAGCCAGTCATTCTCTCAGCCTGGCCACAGATGGCTGGTCTGGGCCGTCCTaGCAGGTGGGAAGGGCTAAC +
Preference number: 2 (lower is better)
Translates to: PMHAGKRASHSLSLATDGWSGPS*QVGRAN
Trigger: GTTAGCCCTTCCCACCTGGCAGGACGGCCCAGACCA...GCCATCTGTGGCCAGGCTGAGAGAATGACTGGCTCGCTTACCAGCGTGCATGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
3UTR-3UTR GCA 90 bp GTAACCCAAGTGGGTGAGACGTCCCCAAAGCCGACAGTGCAGAAGCTCCCAGGGGCCAAAGGCCCATGGTaGCAGGGGCCCAACTGCACA +
Preference number: 2 (lower is better)
Translates to: VTQVGETSPKPTVQKLPGAKGPW*QGPNCT
Trigger: TGTGCAGTTGGGCCCCTGGCACCATGGGCCTTTGGC...CCCTGGGAGCTTCTGCACTGTCGGCTTTGGGGACGTCTCACCCACTTGGGTTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
3UTR-3UTR CCA 90 bp ATGGAAACACAGGTGTGCAGGCCGTGTGGAGCTGGGGATGTAGGAGTGGCCAGTCGGGGACCCGCCATCTaGGGAGGCAAACCACAGAGC +
Preference number: 2 (lower is better)
Translates to: METQVCRPCGAGDVGVASRGPAI*GGKPQS
Trigger: GCTCTGTGGTTTGCCTCCCCAGATGGCGGGTCCCCG...ACTGGCCACTCCTACATCCCCAGCTCCACACGGCCTGCACACCTGTGTTTCCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000535933.5
ENST00000540946.5
ENST00000581396.5
3UTR-3UTR CCA 90 bp GGCCAGACTGTCAGGAGAGTCTGTGCAAGGAGGCCAAGGCCTATGCCAGGGAGCGGTGTGCAGGCCGTGTaGAGCTGGGGATGTAGGAGT +
Preference number: 2 (lower is better)
Translates to: GQTVRRVCARRPRPMPGSGVQAV*SWGCRS
Trigger: ACTCCTACATCCCCAGCTCCACACGGCCTGCACACC...GCTCCCTGGCATAGGCCTTGGCCTCCTTGCACAGACTCTCCTGACAGTCTGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
3UTR-3UTR TCA 90 bp GCCATCCTGAATGCTCCCCAACGACCATGTCGCTGGTCTCTTCTCCCGTCAAGCCTTGAGGCAGATGTGTaGGGCTACGGCAGGCCAGGC +
Preference number: 2 (lower is better)
Translates to: AILNAPQRPCRWSLLPSSLEADV*GYGRPG
Trigger: GCCTGGCCTGCCGTAGCCTCACACATCTGCCTCAAG...GCTTGACGGGAGAAGAGACCAGCGACATGGTCGTTGGGGAGCATTCAGGATGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
3UTR-3UTR TCA 90 bp GAGGTGCAAGCAGGCCACCTGAGGGGTGGCTCCAGGCTAGGAAGGCAGGTGACACTGAAGTCGCCATCCTaGATGCTCCCCAACGACCAT +
Preference number: 2 (lower is better)
Translates to: EVQAGHLRGGSRLGRQVTLKSPS*MLPNDH
Trigger: ATGGTCGTTGGGGAGCATTCAGGATGGCGACTTCAG...TGTCACCTGCCTTCCTAGCCTGGAGCCACCCCTCAGGTGGCCTGCTTGCACCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
3UTR-3UTR TCA 90 bp GTAACCCAAGTGGGTGAGACGTCCCCAAAGCCGACAGTGCAGAAGCTCCCAGGGAGAGTCCAGGTTTCCTaGCAGAGCCGCACCCCCTTC +
Preference number: 2 (lower is better)
Translates to: VTQVGETSPKPTVQKLPGRVQVS*QSRTPF
Trigger: GAAGGGGGTGCGGCTCTGTCAGGAAACCTGGACTCT...CCCTGGGAGCTTCTGCACTGTCGGCTTTGGGGACGTCTCACCCACTTGGGTTAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
3UTR-3UTR GCA 90 bp CTCAGAGAAAAGAAGTGGCTGAAGCTGGTCCTGACTAGTGGGAGGCCTGGGAGCTGTAGGAGTGGCCAGTaGCCGGTGTCCACGGGGTGC +
Preference number: 2 (lower is better)
Translates to: LREKKWLKLVLTSGRPGSCRSGQ*PVSTGC
Trigger: GCACCCCGTGGACACCGGGCACTGGCCACTCCTACA...GCTCCCAGGCCTCCCACTAGTCAGGACCAGCTTCAGCCACTTCTTTTCTCTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000535933.5
ENST00000581396.5
3UTR-3UTR GCA 90 bp TGTCACAAGGTGACAAGTCCAAGGAGTGAGACCAGGCCCATGAGTGCAGCACACGGGGCTGGGCCACTCTaGCCGCTCTTCCTGGGAGGA +
Preference number: 2 (lower is better)
Translates to: CHKVTSPRSETRPMSAAHGAGPL*PLFLGG
Trigger: TCCTCCCAGGAAGAGCGGGCAGAGTGGCCCAGCCCC...GTGTGCTGCACTCATGGGCCTGGTCTCACTCCTTGGACTTGTCACCTTGTGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000478943.5
ENST00000581396.5
3UTR-3UTR GCA 90 bp GTAACCCAAGTGGGTGAGACGTCCCCAAAGCCGACAGTGCAGAAGCTCCCAGGGCATCTGCGGGCTGCCTaGTGCCCTCCCAATTGTCCT +
Preference number: 2 (lower is better)
Translates to: VTQVGETSPKPTVQKLPGHLRAA*CPPNCP
Trigger: AGGACAATTGGGAGGGCAGCAGGCAGCCCGCAGATG...CCCTGGGAGCTTCTGCACTGTCGGCTTTGGGGACGTCTCACCCACTTGGGTTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
3UTR-3UTR GCA 90 bp GCCATCCTGAATGCTCCCCAACGACCATGTCGCTGGTCTCTTCTCCCGTCAAGCCCACCATCTGCGGGCTaGCTGCTGCCCTCCCAATTG +
Preference number: 2 (lower is better)
Translates to: AILNAPQRPCRWSLLPSSPPSAG*LLPSQL
Trigger: CAATTGGGAGGGCAGCAGGCAGCCCGCAGATGGTGG...GCTTGACGGGAGAAGAGACCAGCGACATGGTCGTTGGGGAGCATTCAGGATGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
3UTR-3UTR CCA 90 bp CCCAGGAGGGCAGAATGCCTGAGAAGGTCGCTGAGCCAGGCAGAGGTGAGCACAAGGGGAGAGAGTCTCTaGCTGCAGTTGTCCCACCAC +
Preference number: 2 (lower is better)
Translates to: PRRAECLRRSLSQAEVSTRGESL*LQLSHH
Trigger: GTGGTGGGACAACTGCAGCCAGAGACTCTCTCCCCT...TGTGCTCACCTCTGCCTGGCTCAGCGACCTTCTCAGGCATTCTGCCCTCCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000478943.5
ENST00000581396.5
3UTR-3UTR CCA 90 bp CTGAATGCTCCCCAACGACCATGTCGCTGGTCTCTTCTCCCGTCAAGCCCAGCCGAGAGACCCCCACCATaGAGACCCAGCAGAGCCTTC +
Preference number: 2 (lower is better)
Translates to: LNAPQRPCRWSLLPSSPAERPPP*RPSRAF
Trigger: GAAGGCTCTGCTGGGTCTCCATGGTGGGGGTCTCTC...GGCTGGGCTTGACGGGAGAAGAGACCAGCGACATGGTCGTTGGGGAGCATTCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
3UTR-3UTR TCA 90 bp CTGAATGCTCCCCAACGACCATGTCGCTGGTCTCTTCTCCCGTCAAGCCCAGCCCCATGTGCACATCTGTaGCACTTCCCCAGGCAAGCC +
Preference number: 2 (lower is better)
Translates to: LNAPQRPCRWSLLPSSPAPCAHL*HFPRQA
Trigger: GGCTTGCCTGGGGAAGTGTCACAGATGTGCACATGG...GGCTGGGCTTGACGGGAGAAGAGACCAGCGACATGGTCGTTGGGGAGCATTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
3UTR-3UTR TCA 90 bp GTAACCCAAGTGGGTGAGACGTCCCCAAAGCCGACAGTGCAGAAGCTCCCAGGGAGCATGACCCCCAGCTaGAGTCGCCATCCTGAATGC +
Preference number: 2 (lower is better)
Translates to: VTQVGETSPKPTVQKLPGSMTPS*SRHPEC
Trigger: GCATTCAGGATGGCGACTTCAGCTGGGGGTCATGCT...CCCTGGGAGCTTCTGCACTGTCGGCTTTGGGGACGTCTCACCCACTTGGGTTAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
3UTR-3UTR GCA 90 bp CTGGGCTGGCAGCTGAATGATGGAGAGAGGGTCAAGAAGGTGAGAGACCCCCACCCCAGGAGGGCAGAATaGCTGAGAAGGTCGCTGAGC +
Preference number: 2 (lower is better)
Translates to: LGWQLNDGERVKKVRDPHPRRAE*LRRSLS
Trigger: GCTCAGCGACCTTCTCAGGCATTCTGCCCTCCTGGG...GTGGGGGTCTCTCACCTTCTTGACCCTCTCTCCATCATTCAGCTGCCAGCCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000478943.5
ENST00000581396.5
3UTR-3UTR GCA 90 bp CCAGTGGGGTGGATGGATGCTCTGAGCCTCGGGTGCACTGACCCACCCTCCAGAGGGAACCTCCAAGGATaGCACAAAGCTGTTTGCTGC +
Preference number: 2 (lower is better)
Translates to: PVGWMDALSLGCTDPPSRGNLQG*HKAVCC
Trigger: GCAGCAAACAGCTTTGTGGCATCCTTGGAGGTTCCC...TCTGGAGGGTGGGTCAGTGCACCCGAGGCTCAGAGCATCCATCCACCCCACTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
3UTR-3UTR GCA 90 bp CCAGTGGGGTGGATGGATGCTCTGAGCCTCGGGTGCACTGACCCACCCTCCAGATGTCAGGAGAGTCTGTaGAAGGAGGCCAAGGCCTAT +
Preference number: 2 (lower is better)
Translates to: PVGWMDALSLGCTDPPSRCQESL*KEAKAY
Trigger: ATAGGCCTTGGCCTCCTTGCACAGACTCTCCTGACA...TCTGGAGGGTGGGTCAGTGCACCCGAGGCTCAGAGCATCCATCCACCCCACTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
3UTR-3UTR GCA 90 bp CCAGTGGGGTGGATGGATGCTCTGAGCCTCGGGTGCACTGACCCACCCTCCAGAGCACTATGGAATCCCTaGTCCTTTCAGAGCCTCCAG +
Preference number: 2 (lower is better)
Translates to: PVGWMDALSLGCTDPPSRALWNP*SFQSLQ
Trigger: CTGGAGGCTCTGAAAGGAGCAGGGATTCCATAGTGC...TCTGGAGGGTGGGTCAGTGCACCCGAGGCTCAGAGCATCCATCCACCCCACTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
3UTR-3UTR GCA 90 bp AGAGGGTATCTGGAAGGAGGGCCAGTGGGGTGGATGGATGCTCTGAGCCTCGGGCACCGGGGCTATACTTaGTTCCTGTGCAGGCCTCAA +
Preference number: 2 (lower is better)
Translates to: RGYLEGGPVGWMDALSLGHRGYT*FLCRPQ
Trigger: TTGAGGCCTGCACAGGAAGCAAGTATAGCCCCGGTG...CCCGAGGCTCAGAGCATCCATCCACCCCACTGGCCCTCCTTCCAGATACCCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
3UTR-3UTR CCA 90 bp GGCCAGACTGTCAGGAGAGTCTGTGCAAGGAGGCCAAGGCCTATGCCAGGGAGCGAAAGACAGTCCGGGTaGTCTGCTCAGGAAGCACTG +
Preference number: 2 (lower is better)
Translates to: GQTVRRVCARRPRPMPGSERQSG*SAQEAL
Trigger: CAGTGCTTCCTGAGCAGACCACCCGGACTGTCTTTC...GCTCCCTGGCATAGGCCTTGGCCTCCTTGCACAGACTCTCCTGACAGTCTGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
3UTR CAA 90 bp GTGTGCGGGTGTGAGCCTGCAGTGTGTGCGTGGCAGTTTGGTTTATaGGTAGTGTCGTCTCAGCAGCGTGCCACATGGCCACCATCTGCG +
Preference number: 2 (lower is better)
Translates to: VCGCEPAVCAWQFGL*VVSSQQRATWPPSA
Trigger: CGCAGATGGTGGCCATGTGGCACGCTGCTGAGACGACACTACCAATAAACCAAACTGCCACGCACACACTGCAGGCTCACACCCGCACAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
3UTR-3UTR GCA 90 bp GTTTGGTTTATTGGTAGTGTCGTCTCAGCAGCGTGCCACATGGCCACCATCTGCTGTAGGAGTGGCCAGTaGCCGGTGTCCACGGGGTGC +
Preference number: 2 (lower is better)
Translates to: VWFIGSVVSAACHMATICCRSGQ*PVSTGC
Trigger: GCACCCCGTGGACACCGGGCACTGGCCACTCCTACA...GCAGATGGTGGCCATGTGGCACGCTGCTGAGACGACACTACCAATAAACCAAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000478943.5
ENST00000581396.5
3UTR-3UTR GCA 90 bp AGCCTGGGCTGGCAGCTGAATGATGGAGAGAGGGTCAAGAAGGTGAGAGACCCCATGGAAACACAGGTGTaGAGGCCGTGTGGAGCTGGG +
Preference number: 2 (lower is better)
Translates to: SLGWQLNDGERVKKVRDPMETQV*RPCGAG
Trigger: CCCAGCTCCACACGGCCTGCACACCTGTGTTTCCAT...GGGGTCTCTCACCTTCTTGACCCTCTCTCCATCATTCAGCTGCCAGCCCAGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000478943.5
ENST00000581396.5
3UTR-3UTR GCA 90 bp GGCCAGACTGTCAGGAGAGTCTGTGCAAGGAGGCCAAGGCCTATGCCAGGGAGCGAGCAATACCTCCAGTaGAAGTCCCTCCACAAGCCA +
Preference number: 2 (lower is better)
Translates to: GQTVRRVCARRPRPMPGSEQYLQ*KSLHKP
Trigger: TGGCTTGTGGAGGGACTTGCACTGGAGGTATTGCTC...GCTCCCTGGCATAGGCCTTGGCCTCCTTGCACAGACTCTCCTGACAGTCTGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
3UTR-3UTR CCA 90 bp GTGGGAGGGGAGAGAGTCTCTGGCTGCAGTTGTCCCACCACTCAGAGAAAAGAACAGGCCGTGTGGAGCTaGGGATGTAGGAGTGGCCAG +
Preference number: 2 (lower is better)
Translates to: VGGERVSGCSCPTTQRKEQAVWS*GCRSGQ
Trigger: CTGGCCACTCCTACATCCCCAGCTCCACACGGCCTG...TTCTTTTCTCTGAGTGGTGGGACAACTGCAGCCAGAGACTCTCTCCCCTCCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000581396.5
3UTR-3UTR CCA 90 bp CTGGGCTGGCAGCTGAATGATGGAGAGAGGGTCAAGAAGGTGAGAGACCCCCACTTCTCCATGGGCGGGTaGAGGAAAGACAGTCCGGGT +
Preference number: 2 (lower is better)
Translates to: LGWQLNDGERVKKVRDPHFSMGG*RKDSPG
Trigger: ACCCGGACTGTCTTTCCTCCACCCGCCCATGGAGAA...GTGGGGGTCTCTCACCTTCTTGACCCTCTCTCCATCATTCAGCTGCCAGCCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000478943.5
ENST00000581396.5
3UTR-3UTR CCA 90 bp CCCATGCACGCTGGTAAGCGAGCCAGTCATTCTCTCAGCCTGGCCACAGATGGCCAACGACCATGTCGCTaGTCTCTTCTCCCGTCAAGC +
Preference number: 2 (lower is better)
Translates to: PMHAGKRASHSLSLATDGQRPCR*SLLPSS
Trigger: GCTTGACGGGAGAAGAGACCAGCGACATGGTCGTTG...GCCATCTGTGGCCAGGCTGAGAGAATGACTGGCTCGCTTACCAGCGTGCATGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
3UTR-3UTR CCA 90 bp CCAGTGGGGTGGATGGATGCTCTGAGCCTCGGGTGCACTGACCCACCCTCCAGACAGCTTCACGCACTATaGAATCCCTGCTCCTTTCAG +
Preference number: 2 (lower is better)
Translates to: PVGWMDALSLGCTDPPSRQLHAL*NPCSFQ
Trigger: CTGAAAGGAGCAGGGATTCCATAGTGCGTGAAGCTG...TCTGGAGGGTGGGTCAGTGCACCCGAGGCTCAGAGCATCCATCCACCCCACTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
3UTR-3UTR CCA 90 bp AGAGGGTATCTGGAAGGAGGGCCAGTGGGGTGGATGGATGCTCTGAGCCTCGGGACACTTCTCTCTGGGTaGGGAAGGCCTACTGTAACC +
Preference number: 2 (lower is better)
Translates to: RGYLEGGPVGWMDALSLGTLLSG*GRPTVT
Trigger: GGTTACAGTAGGCCTTCCCCACCCAGAGAGAAGTGT...CCCGAGGCTCAGAGCATCCATCCACCCCACTGGCCCTCCTTCCAGATACCCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
3UTR-3UTR TCA 90 bp GTAACCCAAGTGGGTGAGACGTCCCCAAAGCCGACAGTGCAGAAGCTCCCAGGGTTTGCTGCTGGCTCTTaGGGCAGATGTGTGAGGCTA +
Preference number: 2 (lower is better)
Translates to: VTQVGETSPKPTVQKLPGFAAGS*GRCVRL
Trigger: TAGCCTCACACATCTGCCTCAAGAGCCAGCAGCAAA...CCCTGGGAGCTTCTGCACTGTCGGCTTTGGGGACGTCTCACCCACTTGGGTTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
3UTR-3UTR TCA 90 bp TGGCAGGGCCTCAGAGACAACCCAAGTCACAACCCAAAGGCAGCCAAAGGGCTGCAGGAGACACACCAGTaGGGACACGGGATGGGAATA +
Preference number: 2 (lower is better)
Translates to: WQGLRDNPSHNPKAAKGLQETHQ*GHGMGI
Trigger: TATTCCCATCCCGTGTCCTCACTGGTGTGTCTCCTG...CAGCCCTTTGGCTGCCTTTGGGTTGTGACTTGGGTTGTCTCTGAGGCCCTGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
3UTR-3UTR TCA 90 bp CGAGTGGACAGCAAACGCGACATTCAACACATTCCTCTTTTCAGTAGCCCCCAAGGGACAGGAGCAGACTaGCCCAGCGAGCTGGGCCCA +
Preference number: 2 (lower is better)
Translates to: RVDSKRDIQHIPLFSSPQGTGAD*PSELGP
Trigger: TGGGCCCAGCTCGCTGGGTCAGTCTGCTCCTGTCCC...TTGGGGGCTACTGAAAAGAGGAATGTGTTGAATGTCGCGTTTGCTGTCCACTCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
3UTR-3UTR GCA 90 bp CTCAGAGAAAAGAAGTGGCTGAAGCTGGTCCTGACTAGTGGGAGGCCTGGGAGCATGGAAACACAGGTGTaGAGGCCGTGTGGAGCTGGG +
Preference number: 2 (lower is better)
Translates to: LREKKWLKLVLTSGRPGSMETQV*RPCGAG
Trigger: CCCAGCTCCACACGGCCTGCACACCTGTGTTTCCAT...GCTCCCAGGCCTCCCACTAGTCAGGACCAGCTTCAGCCACTTCTTTTCTCTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000535933.5
ENST00000581396.5
3UTR-3UTR GCA 90 bp AGCCTGGGCTGGCAGCTGAATGATGGAGAGAGGGTCAAGAAGGTGAGAGACCCCCTGCTCTTCCAGAGATaGCACAAAGCCCCTTCAGGG +
Preference number: 2 (lower is better)
Translates to: SLGWQLNDGERVKKVRDPLLFQR*HKAPSG
Trigger: CCCTGAAGGGGCTTTGTGGCATCTCTGGAAGAGCAG...GGGGTCTCTCACCTTCTTGACCCTCTCTCCATCATTCAGCTGCCAGCCCAGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000478943.5
ENST00000581396.5
3UTR-3UTR GCA 90 bp GTAACCCAAGTGGGTGAGACGTCCCCAAAGCCGACAGTGCAGAAGCTCCCAGGGGGGAACCTCCAAGGATaGCACAAAGCTGTTTGCTGC +
Preference number: 2 (lower is better)
Translates to: VTQVGETSPKPTVQKLPGGNLQG*HKAVCC
Trigger: GCAGCAAACAGCTTTGTGGCATCCTTGGAGGTTCCC...CCCTGGGAGCTTCTGCACTGTCGGCTTTGGGGACGTCTCACCCACTTGGGTTAC
58% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
3UTR-3UTR GCA 90 bp CCTGGCACAGGGTCCTGGGTCGGGCAGCACTTGCTCTTCACTGGAATAGTTCCTAGTCGCCATCCTGAATaGTCCCCAACGACCATGTCG +
Preference number: 2 (lower is better)
Translates to: PGTGSWVGQHLLFTGIVPSRHPE*SPTTMS
Trigger: CGACATGGTCGTTGGGGAGCATTCAGGATGGCGACT...AGGAACTATTCCAGTGAAGAGCAAGTGCTGCCCGACCCAGGACCCTGTGCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
3UTR-3UTR CCA 90 bp CATGGATCAGGAACCTGTGCTGACCTAGGCAGTGCATGCTGGAGGGGACAGGAGCGTGCTCTTTCTCCATaGGCGGGTGGAGGAAAGACA +
Preference number: 2 (lower is better)
Translates to: HGSGTCADLGSACWRGQERALSP*AGGGKT
Trigger: TGTCTTTCCTCCACCCGCCCATGGAGAAAGAGCACG...CTCCTGTCCCCTCCAGCATGCACTGCCTAGGTCAGCACAGGTTCCTGATCCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
3UTR-3UTR CCA 90 bp CGAGTGGACAGCAAACGCGACATTCAACACATTCCTCTTTTCAGTAGCCCCCAAAAGGGCTGGGGCCTCTaGGTGCACCTGGGCCATCCC +
Preference number: 2 (lower is better)
Translates to: RVDSKRDIQHIPLFSSPQKGWGL*VHLGHP
Trigger: GGGATGGCCCAGGTGCACCCAGAGGCCCCAGCCCTT...TTGGGGGCTACTGAAAAGAGGAATGTGTTGAATGTCGCGTTTGCTGTCCACTCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
3UTR-3UTR GCA 90 bp GAGCCTGCAGTGTGTGCGTGGCAGTTTGGTTTATTGGTAGTGTCGTCTCAGCAGACAGTCCGGGTGGTCTaGTCAGGAAGCACTGCCTGG +
Preference number: 2 (lower is better)
Translates to: EPAVCAWQFGLLVVSSQQTVRVV*SGSTAW
Trigger: CCAGGCAGTGCTTCCTGAGCAGACCACCCGGACTGT...CTGCTGAGACGACACTACCAATAAACCAAACTGCCACGCACACACTGCAGGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379504.8
ENST00000478943.5
ENST00000581396.5
3UTR-3UTR GCA 90 bp GTTTGGTTTATTGGTAGTGTCGTCTCAGCAGCGTGCCACATGGCCACCATCTGCCCCAGGAGGGCAGAATaGCTGAGAAGGTCGCTGAGC +
Preference number: 2 (lower is better)
Translates to: VWFIGSVVSAACHMATICPRRAE*LRRSLS
Trigger: GCTCAGCGACCTTCTCAGGCATTCTGCCCTCCTGGG...GCAGATGGTGGCCATGTGGCACGCTGCTGAGACGACACTACCAATAAACCAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000478943.5
ENST00000581396.5
3UTR-3UTR GCA 90 bp AGAGGGTATCTGGAAGGAGGGCCAGTGGGGTGGATGGATGCTCTGAGCCTCGGGCAAGACACACGGGGATaGATACAGCTGCAGTATTCT +
Preference number: 2 (lower is better)
Translates to: RGYLEGGPVGWMDALSLGQDTRG*IQLQYS
Trigger: AGAATACTGCAGCTGTATGCATCCCCGTGTGTCTTG...CCCGAGGCTCAGAGCATCCATCCACCCCACTGGCCCTCCTTCCAGATACCCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
3UTR-3UTR GCA 90 bp ACATGGGACCTTGGGTTTCTGCTTACCCTACTGAGCCCCAAGCAGGACTCAGGGCATCCTAGCCAGAGCTaGTATCAGAGGAGCCTCTGC +
Preference number: 2 (lower is better)
Translates to: TWDLGFLLTLLSPKQDSGHPSQS*YQRSLC
Trigger: GCAGAGGCTCCTCTGATAGCAGCTCTGGCTAGGATG...CCCTGAGTCCTGCTTGGGGCTCAGTAGGGTAAGCAGAAACCCAAGGTCCCATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468944.1
3UTR-3UTR CCA 90 bp GTTTGGTTTATTGGTAGTGTCGTCTCAGCAGCGTGCCACATGGCCACCATCTGCGGTGTGCAGGCCGTGTaGAGCTGGGGATGTAGGAGT +
Preference number: 2 (lower is better)
Translates to: VWFIGSVVSAACHMATICGVQAV*SWGCRS
Trigger: ACTCCTACATCCCCAGCTCCACACGGCCTGCACACC...GCAGATGGTGGCCATGTGGCACGCTGCTGAGACGACACTACCAATAAACCAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000478943.5
ENST00000581396.5
3UTR-3UTR CCA 90 bp ATGAGTGCAGCACACCCTGCTCTTCCAGAGATGCCACAAAGCCCCTTCAGGGAGGAAAGACAGTCCGGGTaGTCTGCTCAGGAAGCACTG +
Preference number: 2 (lower is better)
Translates to: MSAAHPALPEMPQSPFREERQSG*SAQEAL
Trigger: CAGTGCTTCCTGAGCAGACCACCCGGACTGTCTTTC...CTCCCTGAAGGGGCTTTGTGGCATCTCTGGAAGAGCAGGGTGTGCTGCACTCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000478943.5
ENST00000581396.5
3UTR-3UTR CCA 90 bp GGCTGGCAGCTGAATGATGGAGAGAGGGTCAAGAAGGTGAGAGACCCCCACCATCGTGCTCTTTCTCCATaGGCGGGTGGAGGAAAGACA +
Preference number: 2 (lower is better)
Translates to: GWQLNDGERVKKVRDPHHRALSP*AGGGKT
Trigger: TGTCTTTCCTCCACCCGCCCATGGAGAAAGAGCACG...ATGGTGGGGGTCTCTCACCTTCTTGACCCTCTCTCCATCATTCAGCTGCCAGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000478943.5
ENST00000581396.5
3UTR-3UTR CCA 90 bp CAGAACCAGCTCTGCCCACAGAAACACATGACAGTGACAAAAACACTAAACTTCTGCGGGGGCCCAGGGTaGGGTGTGGCAGCGGGAAGG +
Preference number: 2 (lower is better)
Translates to: QNQLCPQKHMTVTKTLNFCGGPG*GVAAGR
Trigger: CCTTCCCGCTGCCACACCCCACCCTGGGCCCCCGCA...GAAGTTTAGTGTTTTTGTCACTGTCATGTGTTTCTGTGGGCAGAGCTGGTTCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
3UTR CAA 90 bp ACATGTTACCAGCCCCTAGCTGCTCTGCCTGCCTTCAGGATCAGCTaGGGGAGAGAGTATAAATTGGTGGCCAGAGGACCTCTGAGGTGG +
Preference number: 2 (lower is better)
Translates to: TCYQPLAALPAFRIS*GREYKLVARGPLRW
Trigger: CCACCTCAGAGGTCCTCTGGCCACCAATTTATACTCTCTCCCCAAGCTGATCCTGAAGGCAGGCAGAGCAGCTAGGGGCTGGTAACATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
3UTR-3UTR TCA 90 bp GTTTGGTTTATTGGTAGTGTCGTCTCAGCAGCGTGCCACATGGCCACCATCTGCAGAGGGTCAAGAAGGTaGGAGACCCCCACCATGGAG +
Preference number: 2 (lower is better)
Translates to: VWFIGSVVSAACHMATICRGSRR*ETPTME
Trigger: CTCCATGGTGGGGGTCTCTCACCTTCTTGACCCTCT...GCAGATGGTGGCCATGTGGCACGCTGCTGAGACGACACTACCAATAAACCAAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000478943.5
ENST00000581396.5
3UTR-3UTR CCA 90 bp GTTTGGTTTATTGGTAGTGTCGTCTCAGCAGCGTGCCACATGGCCACCATCTGCAGGGGAGAGAGTCTCTaGCTGCAGTTGTCCCACCAC +
Preference number: 2 (lower is better)
Translates to: VWFIGSVVSAACHMATICRGESL*LQLSHH
Trigger: GTGGTGGGACAACTGCAGCCAGAGACTCTCTCCCCT...GCAGATGGTGGCCATGTGGCACGCTGCTGAGACGACACTACCAATAAACCAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000478943.5
ENST00000581396.5
3UTR-3UTR CCA 90 bp TGTCACAAGGTGACAAGTCCAAGGAGTGAGACCAGGCCCATGAGTGCAGCACACCGTGCTCTTTCTCCATaGGCGGGTGGAGGAAAGACA +
Preference number: 2 (lower is better)
Translates to: CHKVTSPRSETRPMSAAHRALSP*AGGGKT
Trigger: TGTCTTTCCTCCACCCGCCCATGGAGAAAGAGCACG...GTGTGCTGCACTCATGGGCCTGGTCTCACTCCTTGGACTTGTCACCTTGTGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000478943.5
ENST00000581396.5
3UTR-3UTR CCA 90 bp CTAGGACGAGTGGACAGCAAACGCGACATTCAACACATTCCTCTTTTCAGTAGCTCCCTGCTTGGCTGGTaGTCTGGGCCGTCCTGCCAG +
Preference number: 2 (lower is better)
Translates to: LGRVDSKRDIQHIPLFSSSLLGW*SGPSCQ
Trigger: CTGGCAGGACGGCCCAGACCACCAGCCAAGCAGGGA...GCTACTGAAAAGAGGAATGTGTTGAATGTCGCGTTTGCTGTCCACTCGTCCTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
3UTR-3UTR CCA 90 bp CAGAACCAGCTCTGCCCACAGAAACACATGACAGTGACAAAAACACTAAACTTCGCAACCAGCTGGCGCTaGCGCTGGAGCTGGAGCGGG +
Preference number: 2 (lower is better)
Translates to: QNQLCPQKHMTVTKTLNFATSWR*RWSWSG
Trigger: CCCGCTCCAGCTCCAGCGCCAGCGCCAGCTGGTTGC...GAAGTTTAGTGTTTTTGTCACTGTCATGTGTTTCTGTGGGCAGAGCTGGTTCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
3UTR-3UTR GCA 90 bp GTTTGGTTTATTGGTAGTGTCGTCTCAGCAGCGTGCCACATGGCCACCATCTGCGAGAGAGTCTCTGGCTaGAGTTGTCCCACCACTCAG +
Preference number: 2 (lower is better)
Translates to: VWFIGSVVSAACHMATICERVSG*SCPTTQ
Trigger: CTGAGTGGTGGGACAACTGCAGCCAGAGACTCTCTC...GCAGATGGTGGCCATGTGGCACGCTGCTGAGACGACACTACCAATAAACCAAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000478943.5
ENST00000581396.5
3UTR-3UTR CCA 90 bp GAGCCTGCAGTGTGTGCGTGGCAGTTTGGTTTATTGGTAGTGTCGTCTCAGCAGCGTGCTCTTTCTCCATaGGCGGGTGGAGGAAAGACA +
Preference number: 2 (lower is better)
Translates to: EPAVCAWQFGLLVVSSQQRALSP*AGGGKT
Trigger: TGTCTTTCCTCCACCCGCCCATGGAGAAAGAGCACG...CTGCTGAGACGACACTACCAATAAACCAAACTGCCACGCACACACTGCAGGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379504.8
ENST00000478943.5
ENST00000581396.5
3UTR-3UTR CCA 90 bp CTGAATGCTCCCCAACGACCATGTCGCTGGTCTCTTCTCCCGTCAAGCCCAGCCCCTTCAGGATCAGCTTaGGGAGAGAGTATAAATTGG +
Preference number: 2 (lower is better)
Translates to: LNAPQRPCRWSLLPSSPAPSGSA*GESINW
Trigger: CCAATTTATACTCTCTCCCCAAGCTGATCCTGAAGG...GGCTGGGCTTGACGGGAGAAGAGACCAGCGACATGGTCGTTGGGGAGCATTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
3UTR-3UTR CCA 90 bp CAGTTTGGTTTATTGGTAGTGTCGTCTCAGCAGCGTGCCACATGGCCACCATCTGAAAGACAGTCCGGGTaGTCTGCTCAGGAAGCACTG +
Preference number: 2 (lower is better)
Translates to: QFGLLVVSSQQRATWPPSERQSG*SAQEAL
Trigger: CAGTGCTTCCTGAGCAGACCACCCGGACTGTCTTTC...AGATGGTGGCCATGTGGCACGCTGCTGAGACGACACTACCAATAAACCAAACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000478943.5
ENST00000581396.5
3UTR-3UTR CCA 90 bp CGAGTGGACAGCAAACGCGACATTCAACACATTCCTCTTTTCAGTAGCCCCCAACACGGAGGAGCTTCCTaGGTGAACCTGAGCAACTGG +
Preference number: 2 (lower is better)
Translates to: RVDSKRDIQHIPLFSSPQHGGAS*VNLSNW
Trigger: CCAGTTGCTCAGGTTCACCCAGGAAGCTCCTCCGTG...TTGGGGGCTACTGAAAAGAGGAATGTGTTGAATGTCGCGTTTGCTGTCCACTCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
3UTR-3UTR CCA 90 bp CCTTTGGTGGTGAAGGGTACATGGGACCTTGGGTTTCTGCTTACCCTACTGAGCTCCCTGAATTCCAGATaGCTCATCCTAGCCAGAGCT +
Preference number: 2 (lower is better)
Translates to: PLVVKGTWDLGFLLTLLSSLNSR*LILARA
Trigger: AGCTCTGGCTAGGATGAGCCATCTGGAATTCAGGGA...GCTCAGTAGGGTAAGCAGAAACCCAAGGTCCCATGTACCCTTCACCACCAAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468944.1
3UTR-3UTR CCA 90 bp CAGAACCAGCTCTGCCCACAGAAACACATGACAGTGACAAAAACACTAAACTTCCTCTCCAATGATGCCTaGCAACCAGCTGGCGCTGGC +
Preference number: 2 (lower is better)
Translates to: QNQLCPQKHMTVTKTLNFLSNDA*QPAGAG
Trigger: GCCAGCGCCAGCTGGTTGCCAGGCATCATTGGAGAG...GAAGTTTAGTGTTTTTGTCACTGTCATGTGTTTCTGTGGGCAGAGCTGGTTCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
3UTR-3UTR GCA 90 bp CAGAACCAGCTCTGCCCACAGAAACACATGACAGTGACAAAAACACTAAACTTCATGACCCGAGTCCCTTaGCCATGGCCAGGAGACACA +
Preference number: 2 (lower is better)
Translates to: QNQLCPQKHMTVTKTLNFMTRVP*PWPGDT
Trigger: TGTGTCTCCTGGCCATGGGCAAGGGACTCGGGTCAT...GAAGTTTAGTGTTTTTGTCACTGTCATGTGTTTCTGTGGGCAGAGCTGGTTCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
3UTR-3UTR GCA 90 bp CGAGTGGACAGCAAACGCGACATTCAACACATTCCTCTTTTCAGTAGCCCCCAAGGGGATGCATACAGCTaGAGTATTCTCCTTCTGAGC +
Preference number: 2 (lower is better)
Translates to: RVDSKRDIQHIPLFSSPQGDAYS*SILLLS
Trigger: GCTCAGAAGGAGAATACTGCAGCTGTATGCATCCCC...TTGGGGGCTACTGAAAAGAGGAATGTGTTGAATGTCGCGTTTGCTGTCCACTCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
3UTR-3UTR CCA 90 bp CTAGGACGAGTGGACAGCAAACGCGACATTCAACACATTCCTCTTTTCAGTAGCACTTTTTGGGACTCCTaGTTCCATGAGGCAGGGAGG +
Preference number: 2 (lower is better)
Translates to: LGRVDSKRDIQHIPLFSSTFWDS*FHEAGR
Trigger: CCTCCCTGCCTCATGGAACCAGGAGTCCCAAAAAGT...GCTACTGAAAAGAGGAATGTGTTGAATGTCGCGTTTGCTGTCCACTCGTCCTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
3UTR-3UTR CCA 90 bp CGAGTGGACAGCAAACGCGACATTCAACACATTCCTCTTTTCAGTAGCCCCCAACAGCTTCACGCACTATaGAATCCCTGCTCCTTTCAG +
Preference number: 2 (lower is better)
Translates to: RVDSKRDIQHIPLFSSPQQLHAL*NPCSFQ
Trigger: CTGAAAGGAGCAGGGATTCCATAGTGCGTGAAGCTG...TTGGGGGCTACTGAAAAGAGGAATGTGTTGAATGTCGCGTTTGCTGTCCACTCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
3UTR-3UTR CCA 90 bp CGAGTGGACAGCAAACGCGACATTCAACACATTCCTCTTTTCAGTAGCCCCCAAGTGTGCGTGGCAGTTTaGTTTATTGGTAGTGTCGTC +
Preference number: 2 (lower is better)
Translates to: RVDSKRDIQHIPLFSSPQVCVAV*FIGSVV
Trigger: GACGACACTACCAATAAACCAAACTGCCACGCACAC...TTGGGGGCTACTGAAAAGAGGAATGTGTTGAATGTCGCGTTTGCTGTCCACTCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
3UTR-3UTR TCA 90 bp GATTCTCTCTTTTGGAATCAACTCCCTGAATTCCAGATGGCTCATCCTAGCCAGGAGGAGCCTCTGCTCTaGCCACTTATTTTAGTCAGG +
Preference number: 2 (lower is better)
Translates to: DSLFWNQLPEFQMAHPSQEEPLL*PLILVR
Trigger: CCTGACTAAAATAAGTGGTCAGAGCAGAGGCTCCTC...CTGGCTAGGATGAGCCATCTGGAATTCAGGGAGTTGATTCCAAAAGAGAGAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000468944.1
3UTR GCA 72 bp GTCTGGGATGCAGTGCTGAGGCTGCGGAGCACTGACTaGCCGAGGTCGGACCGCCCACCACCCGCAGGCCCA +
Preference number: 3 (lower is better)
Translates to: VWDAVLRLRSTD*PRSDRPPPAGP
Trigger: TGGGCCTGCGGGTGGTGGGCGGTCCGACCTCGGGCAGTCAGTGCTCCGCAGCCTCAGCACTGCATCCCAGAC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
3UTR GCA 72 bp CCAATTGTCCTTGGCCCTCTCCCTGCCCAGGGAGCCTaGAGGGACCCTCGGTGCCAGGCTCGGCTGCTGAGC +
Preference number: 3 (lower is better)
Translates to: PIVLGPLPAQGA*RDPRCQARLLS
Trigger: GCTCAGCAGCCGAGCCTGGCACCGAGGGTCCCTGCAGGCTCCCTGGGCAGGGAGAGGGCCAAGGACAATTGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000478943.5
ENST00000581396.5
3UTR GCA 72 bp GCTCAGTGCCTGGAGACTGCCCAGGCAGGGCTACTCTaGAGCAGGCAGGCCAAAGGCCCATGGTGCCAGGGG +
Preference number: 3 (lower is better)
Translates to: AQCLETAQAGLL*SRQAKGPWCQG
Trigger: CCCCTGGCACCATGGGCCTTTGGCCTGCCTGCTGCAGAGTAGCCCTGCCTGGGCAGTCTCCAGGCACTGAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
3UTR CCA 72 bp GGGCGGGGCCGGGCGTGCTCTTTCTCCATGGGCGGGTaGAGGAAAGACAGTCCGGGTGGTCTGCTCAGGAAG +
Preference number: 3 (lower is better)
Translates to: GRGRACSFSMGG*RKDSPGGLLRK
Trigger: CTTCCTGAGCAGACCACCCGGACTGTCTTTCCTCCACCCGCCCATGGAGAAAGAGCACGCCCGGCCCCGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000478943.5
ENST00000581396.5
3UTR CCA 72 bp CCCGTCAAGCCCAGCCCCCTTTCCCTGCTTGGCTGGTaGTCTGGGCCGTCCTGCCAGGTGGGAAGGGCTAAC +
Preference number: 3 (lower is better)
Translates to: PVKPSPLSLLGW*SGPSCQVGRAN
Trigger: GTTAGCCCTTCCCACCTGGCAGGACGGCCCAGACCACCAGCCAAGCAGGGAAAGGGGGCTGGGCTTGACGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
3UTR TCA 72 bp CGGAGAGGCTGGTGGGCCTTGAGAGTCCAGGTTTCCTaGCAGAGCCGCACCCCCTTCCTGGACCAGGCAGCC +
Preference number: 3 (lower is better)
Translates to: RRGWWALRVQVS*QSRTPFLDQAA
Trigger: GGCTGCCTGGTCCAGGAAGGGGGTGCGGCTCTGTCAGGAAACCTGGACTCTCAAGGCCCACCAGCCTCTCCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
3UTR GCA 72 bp CCATGGGCGGGTGGAGGAAAGACAGTCCGGGTGGTCTaGTCAGGAAGCACTGCCTGGGGCTGGGCCACTCTG +
Preference number: 3 (lower is better)
Translates to: PWAGGGKTVRVV*SGSTAWGWATL
Trigger: CAGAGTGGCCCAGCCCCAGGCAGTGCTTCCTGAGCAGACCACCCGGACTGTCTTTCCTCCACCCGCCCATGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000478943.5
ENST00000581396.5
3UTR GCA 72 bp AGCAGCGTGCCACATGGCCACCATCTGCGGGCTGCCTaGTGCCCTCCCAATTGTCCTTGGCCCTCTCCCTGC +
Preference number: 3 (lower is better)
Translates to: SSVPHGHHLRAA*CPPNCPWPSPC
Trigger: GCAGGGAGAGGGCCAAGGACAATTGGGAGGGCAGCAGGCAGCCCGCAGATGGTGGCCATGTGGCACGCTGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000478943.5
ENST00000581396.5
3UTR GCA 72 bp CTGGCTGGACCAGGGCCTGGGATGACCCGAGTCCCTTaGCCATGGCCAGGAGACACACCAGTGAGGACACGG +
Preference number: 3 (lower is better)
Translates to: LAGPGPGMTRVP*PWPGDTPVRTR
Trigger: CCGTGTCCTCACTGGTGTGTCTCCTGGCCATGGGCAAGGGACTCGGGTCATCCCAGGCCCTGGTCCAGCCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
3UTR GCA 72 bp TGGTCTCTTCTCCCGTCAAGCCCAGCCCCCTTTCCCTaGTTGGCTGGTGGTCTGGGCCGTCCTGCCAGGTGG +
Preference number: 3 (lower is better)
Translates to: WSLLPSSPAPFP*LAGGLGRPARW
Trigger: CCACCTGGCAGGACGGCCCAGACCACCAGCCAAGCAGGGAAAGGGGGCTGGGCTTGACGGGAGAAGAGACCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
3UTR CCA 72 bp GGACCAGGGCCTGGGATGACCCGAGTCCCTTGCCCATaGCCAGGAGACACACCAGTGAGGACACGGGATGGG +
Preference number: 3 (lower is better)
Translates to: GPGPGMTRVPCP*PGDTPVRTRDG
Trigger: CCCATCCCGTGTCCTCACTGGTGTGTCTCCTGGCCATGGGCAAGGGACTCGGGTCATCCCAGGCCCTGGTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
3UTR TCA 72 bp CCTAGGCAGTGCATGCTGGAGGGGACAGGAGCAGACTaGCCCAGCGAGCTGGGCCCAAGACACACGGGGATG +
Preference number: 3 (lower is better)
Translates to: PRQCMLEGTGAD*PSELGPRHTGM
Trigger: CATCCCCGTGTGTCTTGGGCCCAGCTCGCTGGGTCAGTCTGCTCCTGTCCCCTCCAGCATGCACTGCCTAGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
3UTR TCA 72 bp CTTCCCTCTGAGGACACTGGGTCTGGGATGCAGTGCTaGGGCTGCGGAGCACTGACTGCCCGAGGTCGGACC +
Preference number: 3 (lower is better)
Translates to: LPSEDTGSGMQC*GCGALTARGRT
Trigger: GGTCCGACCTCGGGCAGTCAGTGCTCCGCAGCCTCAGCACTGCATCCCAGACCCAGTGTCCTCAGAGGGAAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
3UTR TCA 72 bp GGCCTACCCCAAGCCATCCAGAAGGCTGGGCCCAACTaGGTTAGAGATGCGTGTCTGCGGGGGCCCAGGGTG +
Preference number: 3 (lower is better)
Translates to: GLPQAIQKAGPN*VRDACLRGPRV
Trigger: CACCCTGGGCCCCCGCAGACACGCATCTCTAACTCAGTTGGGCCCAGCCTTCTGGATGGCTTGGGGTAGGCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
3UTR GCA 72 bp GTGAGCATCGGCAGCAGCTGCCCTGCGAGCATCTGTTaGCCTTGGGCCATGTGGAGCCCTTGCCCCAACTCT +
Preference number: 3 (lower is better)
Translates to: VSIGSSCPASIC*PWAMWSPCPNS
Trigger: AGAGTTGGGGCAAGGGCTCCACATGGCCCAAGGGCAACAGATGCTCGCAGGGCAGCTGCTGCCGATGCTCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
3UTR TCA 72 bp ATCTGGAAGGAGGGCCAGTGGGGTGGATGGATGCTCTaGGCCTCGGGTGCACTGACCCACCCTCCAGAACCA +
Preference number: 3 (lower is better)
Translates to: IWKEGQWGGWML*ASGALTHPPEP
Trigger: TGGTTCTGGAGGGTGGGTCAGTGCACCCGAGGCTCAGAGCATCCATCCACCCCACTGGCCCTCCTTCCAGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
3UTR GCA 72 bp CCCCTTTCCCTGCTTGGCTGGTGGTCTGGGCCGTCCTaGCAGGTGGGAAGGGCTAACTACACCATGGATCAG +
Preference number: 3 (lower is better)
Translates to: PLSLLGWWSGPS*QVGRANYTMDQ
Trigger: CTGATCCATGGTGTAGTTAGCCCTTCCCACCTGGCAGGACGGCCCAGACCACCAGCCAAGCAGGGAAAGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
3UTR CCA 72 bp TTCCATGGAAACACAGGTGTGCAGGCCGTGTGGAGCTaGGGATGTAGGAGTGGCCAGTGCCCGGTGTCCACG +
Preference number: 3 (lower is better)
Translates to: FHGNTGVQAVWS*GCRSGQCPVST
Trigger: CGTGGACACCGGGCACTGGCCACTCCTACATCCCCAGCTCCACACGGCCTGCACACCTGTGTTTCCATGGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000535933.5
ENST00000540946.5
ENST00000581396.5
3UTR CCA 72 bp ACAGGCCATCTCGCCAGGGCTAAGTGGAACCCACTCTaGGGCACCGGGGCTATACTTGCTTCCTGTGCAGGC +
Preference number: 3 (lower is better)
Translates to: TGHLARAKWNPL*GTGAILASCAG
Trigger: GCCTGCACAGGAAGCAAGTATAGCCCCGGTGCCCCAGAGTGGGTTCCACTTAGCCCTGGCGAGATGGCCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
3UTR CCA 72 bp GAGTCCAGGTTTCCTGACAGAGCCGCACCCCCTTCCTaGACCAGGCAGCCTAAGGACTGTGCTCCCCAGATG +
Preference number: 3 (lower is better)
Translates to: ESRFPDRAAPPS*TRQPKDCAPQM
Trigger: CATCTGGGGAGCACAGTCCTTAGGCTGCCTGGTCCAGGAAGGGGGTGCGGCTCTGTCAGGAAACCTGGACTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
3UTR TCA 72 bp CCCGAGTCCCTTGCCCATGGCCAGGAGACACACCAGTaGGGACACGGGATGGGAATACATGTTACCAGCCCC +
Preference number: 3 (lower is better)
Translates to: PESLAHGQETHQ*GHGMGIHVTSP
Trigger: GGGGCTGGTAACATGTATTCCCATCCCGTGTCCTCACTGGTGTGTCTCCTGGCCATGGGCAAGGGACTCGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
3UTR TCA 72 bp CTCTGGGTGGGGAAGGCCTACTGTAACCCAAGTGGGTaGGACGTCCCCAAAGCCGACAGTGCAGAAGCTCCC +
Preference number: 3 (lower is better)
Translates to: LWVGKAYCNPSG*DVPKADSAEAP
Trigger: GGGAGCTTCTGCACTGTCGGCTTTGGGGACGTCTCACCCACTTGGGTTACAGTAGGCCTTCCCCACCCAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
3UTR GCA 72 bp GACACTTCCCCAGGCAAGCCAGAGCAATACCTCCAGTaGAAGTCCCTCCACAAGCCAGGACCAGGTGTGCGG +
Preference number: 3 (lower is better)
Translates to: DTSPGKPEQYLQ*KSLHKPGPGVR
Trigger: CCGCACACCTGGTCCTGGCTTGTGGAGGGACTTGCACTGGAGGTATTGCTCTGGCTTGCCTGGGGAAGTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
3UTR CCA 72 bp TGGCATTTCCATGGAAACACAGGTGTGCAGGCCGTGTaGAGCTGGGGATGTAGGAGTGGCCAGTGCCCGGTG +
Preference number: 3 (lower is better)
Translates to: WHFHGNTGVQAV*SWGCRSGQCPV
Trigger: CACCGGGCACTGGCCACTCCTACATCCCCAGCTCCACACGGCCTGCACACCTGTGTTTCCATGGAAATGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000535933.5
ENST00000540946.5
ENST00000581396.5
3UTR CCA 72 bp GGTTTATTGGTAGTGTCGTCTCAGCAGCGTGCCACATaGCCACCATCTGCGGGCTGCCTGCTGCCCTCCCAA +
Preference number: 3 (lower is better)
Translates to: GLLVVSSQQRAT*PPSAGCLLPSQ
Trigger: TTGGGAGGGCAGCAGGCAGCCCGCAGATGGTGGCCATGTGGCACGCTGCTGAGACGACACTACCAATAAACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000478943.5
ENST00000581396.5
3UTR CCA 72 bp CATGTGCTGCCAGAGAGGACAGGGCTAGAATCAGGCTaGCCACTCCACGGAGGAGCTTCCTGGGTGAACCTG +
Preference number: 3 (lower is better)
Translates to: HVLPERTGLESG*PLHGGASWVNL
Trigger: CAGGTTCACCCAGGAAGCTCCTCCGTGGAGTGGCCAGCCTGATTCTAGCCCTGTCCTCTCTGGCAGCACATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
3UTR TCA 72 bp CACACGGGGATGCATACAGCTGCAGTATTCTCCTTCTaGGCAACAGCAGCCTGGTGGGAGGTGTGGGGCCAG +
Preference number: 3 (lower is better)
Translates to: HTGMHTAAVFSF*ATAAWWEVWGQ
Trigger: CTGGCCCCACACCTCCCACCAGGCTGCTGTTGCTCAGAAGGAGAATACTGCAGCTGTATGCATCCCCGTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
3UTR TCA 72 bp GGTGCTCAGCATGACCCCCAGCTGAAGTCGCCATCCTaGATGCTCCCCAACGACCATGTCGCTGGTCTCTTC +
Preference number: 3 (lower is better)
Translates to: GAQHDPQLKSPS*MLPNDHVAGLF
Trigger: GAAGAGACCAGCGACATGGTCGTTGGGGAGCATTCAGGATGGCGACTTCAGCTGGGGGTCATGCTGAGCACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
3UTR GCA 72 bp GCAGTTTGGTTTATTGGTAGTGTCGTCTCAGCAGCGTaGCACATGGCCACCATCTGCGGGCTGCCTGCTGCC +
Preference number: 3 (lower is better)
Translates to: AVWFIGSVVSAA*HMATICGLPAA
Trigger: GGCAGCAGGCAGCCCGCAGATGGTGGCCATGTGGCACGCTGCTGAGACGACACTACCAATAAACCAAACTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000478943.5
ENST00000581396.5
3UTR CCA 72 bp AGAGATCTCAGGACAGGCCATCTCGCCAGGGCTAAGTaGAACCCACTCTGGGGCACCGGGGCTATACTTGCT +
Preference number: 3 (lower is better)
Translates to: RDLRTGHLARAK*NPLWGTGAILA
Trigger: AGCAAGTATAGCCCCGGTGCCCCAGAGTGGGTTCCACTTAGCCCTGGCGAGATGGCCTGTCCTGAGATCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
3UTR CCA 72 bp GAGGCGAGCACTTCAGGGGCTGACAGACAATGTCTCTaGGGTGGAAACACTTCTCTCTGGGTGGGGAAGGCC +
Preference number: 3 (lower is better)
Translates to: EASTSGADRQCL*GGNTSLWVGKA
Trigger: GGCCTTCCCCACCCAGAGAGAAGTGTTTCCACCCCAGAGACATTGTCTGTCAGCCCCTGAAGTGCTCGCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
3UTR CCA 72 bp TTAGAGAGAGGGTATCTGGAAGGAGGGCCAGTGGGGTaGATGGATGCTCTGAGCCTCGGGTGCACTGACCCA +
Preference number: 3 (lower is better)
Translates to: LERGYLEGGPVG*MDALSLGCTDP
Trigger: TGGGTCAGTGCACCCGAGGCTCAGAGCATCCATCCACCCCACTGGCCCTCCTTCCAGATACCCTCTCTCTAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
3UTR-3UTR CAA 90 bp CCCAGGAGGGCAGAATGCCTGAGAAGGTCGCTGAGCCAGGCAGAGGTGAGCACAAGTCTCTGGCTGCAGTaGTCCCACCACTCAGAGAAA +
Preference number: 3 (lower is better)
Translates to: PRRAECLRRSLSQAEVSTSLWLQ*SHHSEK
Trigger: TTTCTCTGAGTGGTGGGACAACTGCAGCCAGAGACT...TGTGCTCACCTCTGCCTGGCTCAGCGACCTTCTCAGGCATTCTGCCCTCCTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000478943.5
ENST00000581396.5
3UTR-3UTR CAA 90 bp GCCATCCTGAATGCTCCCCAACGACCATGTCGCTGGTCTCTTCTCCCGTCAAGCGTTTGCTGCTGGCTCTaGAGGCAGATGTGTGAGGCT +
Preference number: 3 (lower is better)
Translates to: AILNAPQRPCRWSLLPSSVCCWL*RQMCEA
Trigger: AGCCTCACACATCTGCCTCAAGAGCCAGCAGCAAAC...GCTTGACGGGAGAAGAGACCAGCGACATGGTCGTTGGGGAGCATTCAGGATGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
3UTR-3UTR CAA 90 bp CTGAATGCTCCCCAACGACCATGTCGCTGGTCTCTTCTCCCGTCAAGCCCAGCCGGGAGAGAGTATAAATaGGTGGCCAGAGGACCTCTG +
Preference number: 3 (lower is better)
Translates to: LNAPQRPCRWSLLPSSPAGREYK*VARGPL
Trigger: CAGAGGTCCTCTGGCCACCAATTTATACTCTCTCCC...GGCTGGGCTTGACGGGAGAAGAGACCAGCGACATGGTCGTTGGGGAGCATTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
3UTR TCA 72 bp CAAAGCTGTTTGCTGCTGGCTCTTGAGGCAGATGTGTaGGGCTACGGCAGGCCAGGCCACAGCACTGAGTGT +
Preference number: 3 (lower is better)
Translates to: QSCLLLALEADV*GYGRPGHSTEC
Trigger: ACACTCAGTGCTGTGGCCTGGCCTGCCGTAGCCTCACACATCTGCCTCAAGAGCCAGCAGCAAACAGCTTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
3UTR TCA 72 bp TCCAAGGATGCCACAAAGCTGTTTGCTGCTGGCTCTTaGGGCAGATGTGTGAGGCTACGGCAGGCCAGGCCA +
Preference number: 3 (lower is better)
Translates to: SKDATKLFAAGS*GRCVRLRQARP
Trigger: TGGCCTGGCCTGCCGTAGCCTCACACATCTGCCTCAAGAGCCAGCAGCAAACAGCTTTGTGGCATCCTTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
3UTR GCA 72 bp TGCCCAGGCCTCTCAGTCACTGGGAACCTCCAAGGATaGCACAAAGCTGTTTGCTGCTGGCTCTTGAGGCAG +
Preference number: 3 (lower is better)
Translates to: CPGLSVTGNLQG*HKAVCCWLLRQ
Trigger: CTGCCTCAAGAGCCAGCAGCAAACAGCTTTGTGGCATCCTTGGAGGTTCCCAGTGACTGAGAGGCCTGGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
3UTR CCA 72 bp CTAGAATCAGGCTGGCCACTCCACGGAGGAGCTTCCTaGGTGAACCTGAGCAACTGGAGTGAGACATCCCAG +
Preference number: 3 (lower is better)
Translates to: LESGWPLHGGAS*VNLSNWSETSQ
Trigger: CTGGGATGTCTCACTCCAGTTGCTCAGGTTCACCCAGGAAGCTCCTCCGTGGAGTGGCCAGCCTGATTCTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
3UTR CCA 72 bp TCCCCAGGAGGGCGCCTATTTCAGCTTCACGCACTATaGAATCCCTGCTCCTTTCAGAGCCTCCAGGCTCCT +
Preference number: 3 (lower is better)
Translates to: SPGGRLFQLHAL*NPCSFQSLQAP
Trigger: AGGAGCCTGGAGGCTCTGAAAGGAGCAGGGATTCCATAGTGCGTGAAGCTGAAATAGGCGCCCTCCTGGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
3UTR CCA 72 bp AATATCCGTCCCCCTCTCCGGGAGAGCCTGGAGGTATaGACAGACAGAAGCAGTTCTGACTCGGGGGCTGAT +
Preference number: 3 (lower is better)
Translates to: NIRPPLRESLEV*TDRSSSDSGAD
Trigger: ATCAGCCCCCGAGTCAGAACTGCTTCTGTCTGTCCATACCTCCAGGCTCTCCCGGAGAGGGGGACGGATATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
3UTR-3UTR CAA 90 bp CTCTTTCTCCATGGGCGGGTGGAGGAAAGACAGTCCGGGTGGTCTGCTCAGGAAAGTCTCTGGCTGCAGTaGTCCCACCACTCAGAGAAA +
Preference number: 3 (lower is better)
Translates to: LFLHGRVEERQSGWSAQESLWLQ*SHHSEK
Trigger: TTTCTCTGAGTGGTGGGACAACTGCAGCCAGAGACT...TTCCTGAGCAGACCACCCGGACTGTCTTTCCTCCACCCGCCCATGGAGAAAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000478943.5
ENST00000581396.5
3UTR GCA 72 bp GACACGGGATGGGAATACATGTTACCAGCCCCTAGCTaGTCTGCCTGCCTTCAGGATCAGCTTGGGGAGAGA +
Preference number: 3 (lower is better)
Translates to: DTGWEYMLPAPS*SACLQDQLGER
Trigger: TCTCTCCCCAAGCTGATCCTGAAGGCAGGCAGAGCAGCTAGGGGCTGGTAACATGTATTCCCATCCCGTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
3UTR GCA 72 bp ACTGACCCAGCGAGCTGGGCCCAAGACACACGGGGATaGATACAGCTGCAGTATTCTCCTTCTGAGCAACAG +
Preference number: 3 (lower is better)
Translates to: TDPASWAQDTRG*IQLQYSPSEQQ
Trigger: CTGTTGCTCAGAAGGAGAATACTGCAGCTGTATGCATCCCCGTGTGTCTTGGGCCCAGCTCGCTGGGTCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
3UTR GCA 72 bp CAACAACCCCTTGAGGCTCCAAAGCTCCTTGTCCCATaGACGCTGGTAAGCGAGCCAGTCATTCTCTCAGCC +
Preference number: 3 (lower is better)
Translates to: QQPLEAPKLLVP*TLVSEPVILSA
Trigger: GGCTGAGAGAATGACTGGCTCGCTTACCAGCGTGCATGGGACAAGGAGCTTTGGAGCCTCAAGGGGTTGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
3UTR TCA 72 bp GCTCTTCACTGGAATAGTTCCTGTTGGTGCTCAGCATaGCCCCCAGCTGAAGTCGCCATCCTGAATGCTCCC +
Preference number: 3 (lower is better)
Translates to: ALHWNSSCWCSA*PPAEVAILNAP
Trigger: GGGAGCATTCAGGATGGCGACTTCAGCTGGGGGTCATGCTGAGCACCAACAGGAACTATTCCAGTGAAGAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
3UTR GCA 72 bp ACTGGGAACCTCCAAGGATGCCACAAAGCTGTTTGCTaGTGGCTCTTGAGGCAGATGTGTGAGGCTACGGCA +
Preference number: 3 (lower is better)
Translates to: TGNLQGCHKAVC*WLLRQMCEATA
Trigger: TGCCGTAGCCTCACACATCTGCCTCAAGAGCCAGCAGCAAACAGCTTTGTGGCATCCTTGGAGGTTCCCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
3UTR CCA 72 bp GACAATGTCTCTGGGGTGGAAACACTTCTCTCTGGGTaGGGAAGGCCTACTGTAACCCAAGTGGGTGAGACG +
Preference number: 3 (lower is better)
Translates to: DNVSGVETLLSG*GRPTVTQVGET
Trigger: CGTCTCACCCACTTGGGTTACAGTAGGCCTTCCCCACCCAGAGAGAAGTGTTTCCACCCCAGAGACATTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
3UTR-3UTR CAA 90 bp CATGGATCAGGAACCTGTGCTGACCTAGGCAGTGCATGCTGGAGGGGACAGGAGGCCTTCAGGATCAGCTaGGGGAGAGAGTATAAATTG +
Preference number: 3 (lower is better)
Translates to: HGSGTCADLGSACWRGQEAFRIS*GREYKL
Trigger: CAATTTATACTCTCTCCCCAAGCTGATCCTGAAGGC...CTCCTGTCCCCTCCAGCATGCACTGCCTAGGTCAGCACAGGTTCCTGATCCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
3UTR-3UTR CAA 90 bp CTAGGACGAGTGGACAGCAAACGCGACATTCAACACATTCCTCTTTTCAGTAGCGAGCATCTGTTGCCCTaGGGCCATGTGGAGCCCTTG +
Preference number: 3 (lower is better)
Translates to: LGRVDSKRDIQHIPLFSSEHLLP*GHVEPL
Trigger: CAAGGGCTCCACATGGCCCAAGGGCAACAGATGCTC...GCTACTGAAAAGAGGAATGTGTTGAATGTCGCGTTTGCTGTCCACTCGTCCTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
3UTR TCA 72 bp ATAAGCCAAATGTCACAAGGTGACAAGTCCAAGGAGTaGGACCAGGCCCATGAGTGCAGCACACCCTGCTCT +
Preference number: 3 (lower is better)
Translates to: ISQMSQGDKSKE*DQAHECSTPCS
Trigger: AGAGCAGGGTGTGCTGCACTCATGGGCCTGGTCTCACTCCTTGGACTTGTCACCTTGTGACATTTGGCTTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000478943.5
ENST00000581396.5
3UTR CCA 72 bp CAATCAACCTTTGGTGGTGAAGGGTACATGGGACCTTaGGTTTCTGCTTACCCTACTGAGCCCCAAGCAGGA +
Preference number: 3 (lower is better)
Translates to: QSTFGGEGYMGP*VSAYPTEPQAG
Trigger: TCCTGCTTGGGGCTCAGTAGGGTAAGCAGAAACCCAAGGTCCCATGTACCCTTCACCACCAAAGGTTGATTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468944.1
3UTR CCA 72 bp CTGTTTTACAATCAACCTTTGGTGGTGAAGGGTACATaGGACCTTGGGTTTCTGCTTACCCTACTGAGCCCC +
Preference number: 3 (lower is better)
Translates to: LFYNQPLVVKGT*DLGFLLTLLSP
Trigger: GGGGCTCAGTAGGGTAAGCAGAAACCCAAGGTCCCATGTACCCTTCACCACCAAAGGTTGATTGTAAAACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468944.1
3UTR-3UTR CAA 90 bp CGAGTGGACAGCAAACGCGACATTCAACACATTCCTCTTTTCAGTAGCCCCCAATGGCAGTTTGGTTTATaGGTAGTGTCGTCTCAGCAG +
Preference number: 3 (lower is better)
Translates to: RVDSKRDIQHIPLFSSPQWQFGL*VVSSQQ
Trigger: CTGCTGAGACGACACTACCAATAAACCAAACTGCCA...TTGGGGGCTACTGAAAAGAGGAATGTGTTGAATGTCGCGTTTGCTGTCCACTCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
3UTR CCA 72 bp ATTCTCTCTTTTGGAATCAACTCCCTGAATTCCAGATaGCTCATCCTAGCCAGAGCTGCTATCAGAGGAGCC +
Preference number: 3 (lower is better)
Translates to: ILSFGINSLNSR*LILARAAIRGA
Trigger: GGCTCCTCTGATAGCAGCTCTGGCTAGGATGAGCCATCTGGAATTCAGGGAGTTGATTCCAAAAGAGAGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468944.1
3UTR TCA 72 bp AAGGTGGGAAAAAGTGTGTTTCACCCGCCTTTAGGCTaGACAGAAAGCTCAAAACATGTACAGTGCCTCCCT +
Preference number: 3 (lower is better)
Translates to: KVGKSVFHPPLG*TESSKHVQCLP
Trigger: AGGGAGGCACTGTACATGTTTTGAGCTTTCTGTTCAGCCTAAAGGCGGGTGAAACACACTTTTTCCCACCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000468944.1
3UTR TCA 72 bp CTGAACAGAAAGCTCAAAACATGTACAGTGCCTCCCTaGGATGTAGGAGATTCTCTCTTTTGGAATCAACTC +
Preference number: 3 (lower is better)
Translates to: LNRKLKTCTVPP*DVGDSLFWNQL
Trigger: GAGTTGATTCCAAAAGAGAGAATCTCCTACATCTCAGGGAGGCACTGTACATGTTTTGAGCTTTCTGTTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000468944.1
3UTR TCA 72 bp AGGAGGGAATGGTTAGTTTTCACATCTCAGCAACAATaGACGCAGAAAGGGTTAAACACATTCCCAAGAAAA +
Preference number: 3 (lower is better)
Translates to: RREWLVFTSQQQ*TQKGLNTFPRK
Trigger: TTTTCTTGGGAATGTGTTTAACCCTTTCTGCGTTCATTGTTGCTGAGATGTGAAAACTAACCATTCCCTCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR CCA 90 bp TGCAGGCCGTGTGGAGCTGGGGATGTAGGAGTGGCCAGTGCCCGGTGTCCACGGGGGCAGGAGCCTCCATaGGGGGCGAGGGGAGGTCGG +
Preference number: 4 (lower is better)
Translates to: CRPCGAGDVGVASARCPRGQEPP*GARGGR
Trigger: CCGACCTCCCCTCGCCCCCCATGGAGGCTCCTGCCC...CCGTGGACACCGGGCACTGGCCACTCCTACATCCCCAGCTCCACACGGCCTGCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 7 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000535933.5
ENST00000540946.5
ENST00000581396.5
CDS-3UTR CCA 90 bp GGAGTGGCCAGTGCCCGGTGTCCACGGGGTGCGAGCGGGGACCCGCCATCTGGGCAGGCCGTGTGGAGCTaGGGATGTAGGAGTGGCCAG +
Preference number: 4 (lower is better)
Translates to: GVASARCPRGASGDPPSGQAVWS*GCRSGQ
Trigger: CTGGCCACTCCTACATCCCCAGCTCCACACGGCCTG...CCCAGATGGCGGGTCCCCGCTCGCACCCCGTGGACACCGGGCACTGGCCACTCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000535933.5
ENST00000540946.5
ENST00000581396.5
CDS-3UTR GCA 90 bp GTGCAGGCCGTGTGGAGCTGGGGATGTAGGAGTGGCCAGTGCCCGGTGTCCACGCCTGCCCAGGGAGCCTaGAGGGACCCTCGGTGCCAG +
Preference number: 4 (lower is better)
Translates to: VQAVWSWGCRSGQCPVSTPAQGA*RDPRCQ
Trigger: CTGGCACCGAGGGTCCCTGCAGGCTCCCTGGGCAGG...CGTGGACACCGGGCACTGGCCACTCCTACATCCCCAGCTCCACACGGCCTGCAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000478943.5
ENST00000581396.5
CDS-3UTR GCA 90 bp GGAGTGGCCAGTGCCCGGTGTCCACGGGGTGCGAGCGGGGACCCGCCATCTGGGCATCTGCGGGCTGCCTaGTGCCCTCCCAATTGTCCT +
Preference number: 4 (lower is better)
Translates to: GVASARCPRGASGDPPSGHLRAA*CPPNCP
Trigger: AGGACAATTGGGAGGGCAGCAGGCAGCCCGCAGATG...CCCAGATGGCGGGTCCCCGCTCGCACCCCGTGGACACCGGGCACTGGCCACTCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000478943.5
ENST00000581396.5
CDS-3UTR CCA 90 bp GGAGTGGCCAGTGCCCGGTGTCCACGGGGTGCGAGCGGGGACCCGCCATCTGGGGGTGTGCAGGCCGTGTaGAGCTGGGGATGTAGGAGT +
Preference number: 4 (lower is better)
Translates to: GVASARCPRGASGDPPSGGVQAV*SWGCRS
Trigger: ACTCCTACATCCCCAGCTCCACACGGCCTGCACACC...CCCAGATGGCGGGTCCCCGCTCGCACCCCGTGGACACCGGGCACTGGCCACTCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000535933.5
ENST00000540946.5
ENST00000581396.5
CDS-3UTR CCA 90 bp GGAGTGGCCAGTGCCCGGTGTCCACGGGGTGCGAGCGGGGACCCGCCATCTGGGGGTGGCATGGTGGGGTaGTGGGGGAAGGCTAGTGAA +
Preference number: 4 (lower is better)
Translates to: GVASARCPRGASGDPPSGGGMVG*WGKASE
Trigger: TTCACTAGCCTTCCCCCACCACCCCACCATGCCACC...CCCAGATGGCGGGTCCCCGCTCGCACCCCGTGGACACCGGGCACTGGCCACTCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR TCA 90 bp GTGCAGGCCGTGTGGAGCTGGGGATGTAGGAGTGGCCAGTGCCCGGTGTCCACGCCGGCCAGAAGGGTTTaGGGCTGGGGCAGGAGCCTC +
Preference number: 4 (lower is better)
Translates to: VQAVWSWGCRSGQCPVSTPARRV*GWGRSL
Trigger: GAGGCTCCTGCCCCAGCCTCAAACCCTTCTGGCCGG...CGTGGACACCGGGCACTGGCCACTCCTACATCCCCAGCTCCACACGGCCTGCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000535933.5
ENST00000540946.5
ENST00000581396.5
CDS-3UTR TCA 90 bp GTGTGGAGCTGGGGATGTAGGAGTGGCCAGTGCCCGGTGTCCACGGGGTGCGAGCCGGCCAGAAGGGTTTaGGGCTGGGGCAGGAGCCTC +
Preference number: 4 (lower is better)
Translates to: VWSWGCRSGQCPVSTGCEPARRV*GWGRSL
Trigger: GAGGCTCCTGCCCCAGCCTCAAACCCTTCTGGCCGG...CTCGCACCCCGTGGACACCGGGCACTGGCCACTCCTACATCCCCAGCTCCACAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000535933.5
ENST00000540946.5
ENST00000581396.5
CDS-3UTR TCA 90 bp AGGCCGTGTGGAGCTGGGGATGTAGGAGTGGCCAGTGCCCGGTGTCCACGGGGTCCGGCCAGAAGGGTTTaGGGCTGGGGCAGGAGCCTC +
Preference number: 4 (lower is better)
Translates to: RPCGAGDVGVASARCPRGPARRV*GWGRSL
Trigger: GAGGCTCCTGCCCCAGCCTCAAACCCTTCTGGCCGG...ACCCCGTGGACACCGGGCACTGGCCACTCCTACATCCCCAGCTCCACACGGCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000535933.5
ENST00000540946.5
ENST00000581396.5
CDS-3UTR TCA 90 bp CAGGTGTGCAGGCCGTGTGGAGCTGGGGATGTAGGAGTGGCCAGTGCCCGGTGTGAGGCTGCGGAGCACTaGCTGCCCGAGGTCGGACCG +
Preference number: 4 (lower is better)
Translates to: QVCRPCGAGDVGVASARCEAAEH*LPEVGP
Trigger: CGGTCCGACCTCGGGCAGTCAGTGCTCCGCAGCCTC...ACACCGGGCACTGGCCACTCCTACATCCCCAGCTCCACACGGCCTGCACACCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR CCA 90 bp GGGGCCGGGCGTGCTCTTTCTCCATGGGCGGGTGGAGGAAAGACAGTCCGGGTGGGAGGGCTGCTAGCCTaGCACAGGGTCCTGGGTCGG +
Preference number: 4 (lower is better)
Translates to: GAGRALSPWAGGGKTVRVGGLLA*HRVLGR
Trigger: CCGACCCAGGACCCTGTGCCAGGCTAGCAGCCCTCC...CACCCGGACTGTCTTTCCTCCACCCGCCCATGGAGAAAGAGCACGCCCGGCCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR CCA 90 bp CCGCCCACCACCCGCAGGCCCAGCTCTGGCAGGGCCTCAGAGACAACCCAAGTCCAGGCCAAAGGCCCATaGTGCCAGGGGCCCAACTGC +
Preference number: 4 (lower is better)
Translates to: PPTTRRPSSGRASETTQVQAKGP*CQGPNC
Trigger: GCAGTTGGGCCCCTGGCACCATGGGCCTTTGGCCTG...GACTTGGGTTGTCTCTGAGGCCCTGCCAGAGCTGGGCCTGCGGGTGGTGGGCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR CCA 90 bp AGGCCGTGTGGAGCTGGGGATGTAGGAGTGGCCAGTGCCCGGTGTCCACGGGGTCCCAACTCTCCGGGCTaGGTCCTCTCCTCCCCAGGG +
Preference number: 4 (lower is better)
Translates to: RPCGAGDVGVASARCPRGPNSPG*VLSSPG
Trigger: CCCTGGGGAGGAGAGGACCCAGCCCGGAGAGTTGGG...ACCCCGTGGACACCGGGCACTGGCCACTCCTACATCCCCAGCTCCACACGGCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR CCA 90 bp CCAGTGGGGTGGATGGATGCTCTGAGCCTCGGGTGCACTGACCCACCCTCCAGATGCGGGGGCCCAGGGTaGGGTGTGGCAGCGGGAAGG +
Preference number: 4 (lower is better)
Translates to: PVGWMDALSLGCTDPPSRCGGPG*GVAAGR
Trigger: CCTTCCCGCTGCCACACCCCACCCTGGGCCCCCGCA...TCTGGAGGGTGGGTCAGTGCACCCGAGGCTCAGAGCATCCATCCACCCCACTGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR TCA 90 bp GGAGTGGCCAGTGCCCGGTGTCCACGGGGTGCGAGCGGGGACCCGCCATCTGGGCCTGGCAATCTGTTCTaGATTGGCTGTGATGGGGCC +
Preference number: 4 (lower is better)
Translates to: GVASARCPRGASGDPPSGPGNLF*IGCDGA
Trigger: GGCCCCATCACAGCCAATTCAGAACAGATTGCCAGG...CCCAGATGGCGGGTCCCCGCTCGCACCCCGTGGACACCGGGCACTGGCCACTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000581396.5
CDS-3UTR TCA 90 bp TGCAGGCCGTGTGGAGCTGGGGATGTAGGAGTGGCCAGTGCCCGGTGTCCACGGGCCAGGCTCGGCTGCTaGGCCAGCTTGGGTGTGAAG +
Preference number: 4 (lower is better)
Translates to: CRPCGAGDVGVASARCPRARLGC*ASLGVK
Trigger: CTTCACACCCAAGCTGGCTCAGCAGCCGAGCCTGGC...CCGTGGACACCGGGCACTGGCCACTCCTACATCCCCAGCTCCACACGGCCTGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000478943.5
ENST00000581396.5
CDS-3UTR TCA 90 bp GTGTGGAGCTGGGGATGTAGGAGTGGCCAGTGCCCGGTGTCCACGGGGTGCGAGTGGCCAGAGGACCTCTaGGGTGGGAGGAGGCCAGAC +
Preference number: 4 (lower is better)
Translates to: VWSWGCRSGQCPVSTGCEWPEDL*GGRRPD
Trigger: GTCTGGCCTCCTCCCACCTCAGAGGTCCTCTGGCCA...CTCGCACCCCGTGGACACCGGGCACTGGCCACTCCTACATCCCCAGCTCCACAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR TCA 90 bp CAGGTGTGCAGGCCGTGTGGAGCTGGGGATGTAGGAGTGGCCAGTGCCCGGTGTGGGACAGGAGCAGACTaGCCCAGCGAGCTGGGCCCA +
Preference number: 4 (lower is better)
Translates to: QVCRPCGAGDVGVASARCGTGAD*PSELGP
Trigger: TGGGCCCAGCTCGCTGGGTCAGTCTGCTCCTGTCCC...ACACCGGGCACTGGCCACTCCTACATCCCCAGCTCCACACGGCCTGCACACCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR GCA 90 bp GGAGTGGCCAGTGCCCGGTGTCCACGGGGTGCGAGCGGGGACCCGCCATCTGGGTCCATGACAGATGGCTaGGCAACGGGGATCCCTTCT +
Preference number: 4 (lower is better)
Translates to: GVASARCPRGASGDPPSGSMTDG*ATGIPS
Trigger: AGAAGGGATCCCCGTTGCGCAGCCATCTGTCATGGA...CCCAGATGGCGGGTCCCCGCTCGCACCCCGTGGACACCGGGCACTGGCCACTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000581396.5
CDS-3UTR GCA 90 bp TGCAGGCCGTGTGGAGCTGGGGATGTAGGAGTGGCCAGTGCCCGGTGTCCACGGTGTAGGAGTGGCCAGTaGCCGGTGTCCACGGGGTGC +
Preference number: 4 (lower is better)
Translates to: CRPCGAGDVGVASARCPRCRSGQ*PVSTGC
Trigger: GCACCCCGTGGACACCGGGCACTGGCCACTCCTACA...CCGTGGACACCGGGCACTGGCCACTCCTACATCCCCAGCTCCACACGGCCTGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000535933.5
ENST00000540946.5
ENST00000581396.5
CDS-3UTR GCA 90 bp ACAGGTGTGCAGGCCGTGTGGAGCTGGGGATGTAGGAGTGGCCAGTGCCCGGTGGGGGCTGGGCCACTCTaGCCGCTCTTCCTGGGAGGA +
Preference number: 4 (lower is better)
Translates to: TGVQAVWSWGCRSGQCPVGAGPL*PLFLGG
Trigger: TCCTCCCAGGAAGAGCGGGCAGAGTGGCCCAGCCCC...CACCGGGCACTGGCCACTCCTACATCCCCAGCTCCACACGGCCTGCACACCTGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000581396.5
CDS-3UTR CCA 90 bp GTGCAGGCCGTGTGGAGCTGGGGATGTAGGAGTGGCCAGTGCCCGGTGTCCACGCGGGGACCCGCCATCTaGGGAGGCAAACCACAGAGC +
Preference number: 4 (lower is better)
Translates to: VQAVWSWGCRSGQCPVSTRGPAI*GGKPQS
Trigger: GCTCTGTGGTTTGCCTCCCCAGATGGCGGGTCCCCG...CGTGGACACCGGGCACTGGCCACTCCTACATCCCCAGCTCCACACGGCCTGCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000535933.5
ENST00000540946.5
ENST00000581396.5
CDS-3UTR CCA 90 bp AGGGCGGGGCCGGGCGTGCTCTTTCTCCATGGGCGGGTGGAGGAAAGACAGTCCTCAGGAAGCACTGCCTaGGGCTGGGCCACTCTGCCC +
Preference number: 4 (lower is better)
Translates to: RAGPGVLFLHGRVEERQSSGSTA*GWATLP
Trigger: GGGCAGAGTGGCCCAGCCCCAGGCAGTGCTTCCTGA...GGACTGTCTTTCCTCCACCCGCCCATGGAGAAAGAGCACGCCCGGCCCCGCCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000478943.5
ENST00000581396.5
CDS-3UTR CCA 90 bp AGGCCGTGTGGAGCTGGGGATGTAGGAGTGGCCAGTGCCCGGTGTCCACGGGGTCCGCAGGCCCAGCTCTaGCAGGGCCTCAGAGACAAC +
Preference number: 4 (lower is better)
Translates to: RPCGAGDVGVASARCPRGPQAQL*QGLRDN
Trigger: GTTGTCTCTGAGGCCCTGCCAGAGCTGGGCCTGCGG...ACCCCGTGGACACCGGGCACTGGCCACTCCTACATCCCCAGCTCCACACGGCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR CCA 90 bp CCAGTGGGGTGGATGGATGCTCTGAGCCTCGGGTGCACTGACCCACCCTCCAGAGCAACCAGCTGGCGCTaGCGCTGGAGCTGGAGCGGG +
Preference number: 4 (lower is better)
Translates to: PVGWMDALSLGCTDPPSRATSWR*RWSWSG
Trigger: CCCGCTCCAGCTCCAGCGCCAGCGCCAGCTGGTTGC...TCTGGAGGGTGGGTCAGTGCACCCGAGGCTCAGAGCATCCATCCACCCCACTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR CCA 90 bp CCGCCCACCACCCGCAGGCCCAGCTCTGGCAGGGCCTCAGAGACAACCCAAGTCCTCGCCAGGGCTAAGTaGAACCCACTCTGGGGCACC +
Preference number: 4 (lower is better)
Translates to: PPTTRRPSSGRASETTQVLARAK*NPLWGT
Trigger: GGTGCCCCAGAGTGGGTTCCACTTAGCCCTGGCGAG...GACTTGGGTTGTCTCTGAGGCCCTGCCAGAGCTGGGCCTGCGGGTGGTGGGCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR CCA 90 bp GTGTGGAGCTGGGGATGTAGGAGTGGCCAGTGCCCGGTGTCCACGGGGTGCGAGCCCCAGGTGGGCCCATaGCCTACCCCAAGCCATCCA +
Preference number: 4 (lower is better)
Translates to: VWSWGCRSGQCPVSTGCEPQVGP*PTPSHP
Trigger: TGGATGGCTTGGGGTAGGCCATGGGCCCACCTGGGG...CTCGCACCCCGTGGACACCGGGCACTGGCCACTCCTACATCCCCAGCTCCACAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR CCA 90 bp GGGGCCGGGCGTGCTCTTTCTCCATGGGCGGGTGGAGGAAAGACAGTCCGGGTGAAGCTGCCTGGGCCTTaGGGCCTGCCAGACGTGGTC +
Preference number: 4 (lower is better)
Translates to: GAGRALSPWAGGGKTVRVKLPGP*GLPDVV
Trigger: GACCACGTCTGGCAGGCCCCAAGGCCCAGGCAGCTT...CACCCGGACTGTCTTTCCTCCACCCGCCCATGGAGAAAGAGCACGCCCGGCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478943.5
CDS-3UTR TCA 90 bp GTGCAGGCCGTGTGGAGCTGGGGATGTAGGAGTGGCCAGTGCCCGGTGTCCACGGCAGCAGCTCCTCGGTaGCCTCCTCATTGGACACGC +
Preference number: 4 (lower is better)
Translates to: VQAVWSWGCRSGQCPVSTAAAPR*PPHWTR
Trigger: GCGTGTCCAATGAGGAGGTCACCGAGGAGCTGCTGC...CGTGGACACCGGGCACTGGCCACTCCTACATCCCCAGCTCCACACGGCCTGCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000535933.5
ENST00000540946.5
ENST00000581396.5
CDS-3UTR TCA 90 bp AGGGCGGGGCCGGGCGTGCTCTTTCTCCATGGGCGGGTGGAGGAAAGACAGTCCGTGAGACCAGGCCCATaGGTGCAGCACACCCTGCTC +
Preference number: 4 (lower is better)
Translates to: RAGPGVLFLHGRVEERQSVRPGP*VQHTLL
Trigger: GAGCAGGGTGTGCTGCACTCATGGGCCTGGTCTCAC...GGACTGTCTTTCCTCCACCCGCCCATGGAGAAAGAGCACGCCCGGCCCCGCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000478943.5
ENST00000581396.5
CDS-3UTR TCA 90 bp GTGTGCAGGCCGTGTGGAGCTGGGGATGTAGGAGTGGCCAGTGCCCGGTGTCCAGCCAGGCTCGGCTGCTaGGCCAGCTTGGGTGTGAAG +
Preference number: 4 (lower is better)
Translates to: VCRPCGAGDVGVASARCPARLGC*ASLGVK
Trigger: CTTCACACCCAAGCTGGCTCAGCAGCCGAGCCTGGC...TGGACACCGGGCACTGGCCACTCCTACATCCCCAGCTCCACACGGCCTGCACAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000478943.5
ENST00000581396.5
CDS-3UTR GCA 90 bp CATGGAAACACAGGTGTGCAGGCCGTGTGGAGCTGGGGATGTAGGAGTGGCCAGCCGGTGTCCACGGGGTaGGAGCGGGGACCCGCCATC +
Preference number: 4 (lower is better)
Translates to: HGNTGVQAVWSWGCRSGQPVSTG*ERGPAI
Trigger: GATGGCGGGTCCCCGCTCGCACCCCGTGGACACCGG...CTGGCCACTCCTACATCCCCAGCTCCACACGGCCTGCACACCTGTGTTTCCATG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000535933.5
ENST00000540946.5
ENST00000581396.5
CDS-3UTR GCA 90 bp ACAGGGCGGGGCCGGGCGTGCTCTTTCTCCATGGGCGGGTGGAGGAAAGACAGTTGTAGGAGTGGCCAGTaGCCGGTGTCCACGGGGTGC +
Preference number: 4 (lower is better)
Translates to: TGRGRACSFSMGGWRKDSCRSGQ*PVSTGC
Trigger: GCACCCCGTGGACACCGGGCACTGGCCACTCCTACA...ACTGTCTTTCCTCCACCCGCCCATGGAGAAAGAGCACGCCCGGCCCCGCCCTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000478943.5
ENST00000581396.5
CDS-3UTR GCA 90 bp ACAGGTGTGCAGGCCGTGTGGAGCTGGGGATGTAGGAGTGGCCAGTGCCCGGTGTGTAGGAGTGGCCAGTaGCCGGTGTCCACGGGGTGC +
Preference number: 4 (lower is better)
Translates to: TGVQAVWSWGCRSGQCPVCRSGQ*PVSTGC
Trigger: GCACCCCGTGGACACCGGGCACTGGCCACTCCTACA...CACCGGGCACTGGCCACTCCTACATCCCCAGCTCCACACGGCCTGCACACCTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000535933.5
ENST00000540946.5
ENST00000581396.5
CDS-3UTR GCA 90 bp AGGGCGGGGCCGGGCGTGCTCTTTCTCCATGGGCGGGTGGAGGAAAGACAGTCCCCACCATCTGCGGGCTaGCTGCTGCCCTCCCAATTG +
Preference number: 4 (lower is better)
Translates to: RAGPGVLFLHGRVEERQSPPSAG*LLPSQL
Trigger: CAATTGGGAGGGCAGCAGGCAGCCCGCAGATGGTGG...GGACTGTCTTTCCTCCACCCGCCCATGGAGAAAGAGCACGCCCGGCCCCGCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000478943.5
ENST00000581396.5
CDS-3UTR GCA 90 bp AGGCCGTGTGGAGCTGGGGATGTAGGAGTGGCCAGTGCCCGGTGTCCACGGGGTAGCCAGGACCAGGTGTaGGGGTGTGAGCCTGCAGTG +
Preference number: 4 (lower is better)
Translates to: RPCGAGDVGVASARCPRGSQDQV*GCEPAV
Trigger: CACTGCAGGCTCACACCCGCACACCTGGTCCTGGCT...ACCCCGTGGACACCGGGCACTGGCCACTCCTACATCCCCAGCTCCACACGGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR CCA 90 bp AGGCCTGGGAGCAGACACGGTGGCATTTCCATGGAAACACAGGTGTGCAGGCCGGGGCAGGAGCCTCCATaGGGGGCGAGGGGAGGTCGG +
Preference number: 4 (lower is better)
Translates to: RPGSRHGGISMETQVCRPGQEPP*GARGGR
Trigger: CCGACCTCCCCTCGCCCCCCATGGAGGCTCCTGCCC...CGGCCTGCACACCTGTGTTTCCATGGAAATGCCACCGTGTCTGCTCCCAGGCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000535933.5
ENST00000540946.5
ENST00000581396.5
CDS-3UTR CCA 90 bp AGGCCGTGTGGAGCTGGGGATGTAGGAGTGGCCAGTGCCCGGTGTCCACGGGGTCTTTCCCTGCTTGGCTaGTGGTCTGGGCCGTCCTGC +
Preference number: 4 (lower is better)
Translates to: RPCGAGDVGVASARCPRGLSLLG*WSGPSC
Trigger: GCAGGACGGCCCAGACCACCAGCCAAGCAGGGAAAG...ACCCCGTGGACACCGGGCACTGGCCACTCCTACATCCCCAGCTCCACACGGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR CCA 90 bp ACAGGGCGGGGCCGGGCGTGCTCTTTCTCCATGGGCGGGTGGAGGAAAGACAGTAGGCAGCCAAAGGGCTaGGGCCTCTGGGTGCACCTG +
Preference number: 4 (lower is better)
Translates to: TGRGRACSFSMGGWRKDSRQPKG*GLWVHL
Trigger: CAGGTGCACCCAGAGGCCCCAGCCCTTTGGCTGCCT...ACTGTCTTTCCTCCACCCGCCCATGGAGAAAGAGCACGCCCGGCCCCGCCCTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR CCA 90 bp CCAGTGGGGTGGATGGATGCTCTGAGCCTCGGGTGCACTGACCCACCCTCCAGACGCTGGCGCTGGAGCTaGAGCGGGGCAGTTCTGGGA +
Preference number: 4 (lower is better)
Translates to: PVGWMDALSLGCTDPPSRRWRWS*SGAVLG
Trigger: TCCCAGAACTGCCCCGCTCCAGCTCCAGCGCCAGCG...TCTGGAGGGTGGGTCAGTGCACCCGAGGCTCAGAGCATCCATCCACCCCACTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR CCA 90 bp GTGTGCAGGCCGTGTGGAGCTGGGGATGTAGGAGTGGCCAGTGCCCGGTGTCCACCCAAGACCACCAGGTaGCATGGTGGGGTGGTGGGG +
Preference number: 4 (lower is better)
Translates to: VCRPCGAGDVGVASARCPPKTTR*HGGVVG
Trigger: CCCCACCACCCCACCATGCCACCTGGTGGTCTTGGG...TGGACACCGGGCACTGGCCACTCCTACATCCCCAGCTCCACACGGCCTGCACAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
3UTR CAA 72 bp CATCGGCAGCAGCTGCCCTGCGAGCATCTGTTGCCCTaGGGCCATGTGGAGCCCTTGCCCCAACTCTCCGGG +
Preference number: 4 (lower is better)
Translates to: HRQQLPCEHLLP*GHVEPLPQLSG
Trigger: CCCGGAGAGTTGGGGCAAGGGCTCCACATGGCCCAAGGGCAACAGATGCTCGCAGGGCAGCTGCTGCCGATG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR TCA 90 bp ACAGGTGTGCAGGCCGTGTGGAGCTGGGGATGTAGGAGTGGCCAGTGCCCGGTGTGGACACGCGGGAGATaGGCTCCACGATGCGCTGCT +
Preference number: 4 (lower is better)
Translates to: TGVQAVWSWGCRSGQCPVWTRGR*APRCAA
Trigger: AGCAGCGCATCGTGGAGCTCATCTCCCGCGTGTCCA...CACCGGGCACTGGCCACTCCTACATCCCCAGCTCCACACGGCCTGCACACCTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000535933.5
ENST00000540946.5
ENST00000581396.5
CDS-3UTR TCA 90 bp CAGGTGTGCAGGCCGTGTGGAGCTGGGGATGTAGGAGTGGCCAGTGCCCGGTGTTGGACACGCGGGAGATaGGCTCCACGATGCGCTGCT +
Preference number: 4 (lower is better)
Translates to: QVCRPCGAGDVGVASARCWTRGR*APRCAA
Trigger: AGCAGCGCATCGTGGAGCTCATCTCCCGCGTGTCCA...ACACCGGGCACTGGCCACTCCTACATCCCCAGCTCCACACGGCCTGCACACCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000535933.5
ENST00000540946.5
ENST00000581396.5
CDS-3UTR TCA 90 bp CAGGTGTGCAGGCCGTGTGGAGCTGGGGATGTAGGAGTGGCCAGTGCCCGGTGTGCAGCAGCTCCTCGGTaGCCTCCTCATTGGACACGC +
Preference number: 4 (lower is better)
Translates to: QVCRPCGAGDVGVASARCAAAPR*PPHWTR
Trigger: GCGTGTCCAATGAGGAGGTCACCGAGGAGCTGCTGC...ACACCGGGCACTGGCCACTCCTACATCCCCAGCTCCACACGGCCTGCACACCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000535933.5
ENST00000540946.5
ENST00000581396.5
CDS-3UTR TCA 90 bp GGCCAGACTGTCAGGAGAGTCTGTGCAAGGAGGCCAAGGCCTATGCCAGGGAGCCCGGCCAGAAGGGTTTaGGGCTGGGGCAGGAGCCTC +
Preference number: 4 (lower is better)
Translates to: GQTVRRVCARRPRPMPGSPARRV*GWGRSL
Trigger: GAGGCTCCTGCCCCAGCCTCAAACCCTTCTGGCCGG...GCTCCCTGGCATAGGCCTTGGCCTCCTTGCACAGACTCTCCTGACAGTCTGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR TCA 90 bp GTGCAGGCCGTGTGGAGCTGGGGATGTAGGAGTGGCCAGTGCCCGGTGTCCACGGAAGAGGGCATCCTCTaGCCGCTCTGGCTTCTTCCG +
Preference number: 4 (lower is better)
Translates to: VQAVWSWGCRSGQCPVSTEEGIL*PLWLLP
Trigger: CGGAAGAAGCCAGAGCGGTCAGAGGATGCCCTCTTC...CGTGGACACCGGGCACTGGCCACTCCTACATCCCCAGCTCCACACGGCCTGCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000535933.5
ENST00000540946.5
ENST00000581396.5
CDS-3UTR TCA 90 bp GTGTGGAGCTGGGGATGTAGGAGTGGCCAGTGCCCGGTGTCCACGGGGTGCGAGGAAGAGGGCATCCTCTaGCCGCTCTGGCTTCTTCCG +
Preference number: 4 (lower is better)
Translates to: VWSWGCRSGQCPVSTGCEEEGIL*PLWLLP
Trigger: CGGAAGAAGCCAGAGCGGTCAGAGGATGCCCTCTTC...CTCGCACCCCGTGGACACCGGGCACTGGCCACTCCTACATCCCCAGCTCCACAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000535933.5
ENST00000540946.5
ENST00000581396.5
CDS-3UTR TCA 90 bp AGGGCGGGGCCGGGCGTGCTCTTTCTCCATGGGCGGGTGGAGGAAAGACAGTCCGCCTGGGCTGGCAGCTaGATGATGGAGAGAGGGTCA +
Preference number: 4 (lower is better)
Translates to: RAGPGVLFLHGRVEERQSAWAGS*MMERGS
Trigger: TGACCCTCTCTCCATCATTCAGCTGCCAGCCCAGGC...GGACTGTCTTTCCTCCACCCGCCCATGGAGAAAGAGCACGCCCGGCCCCGCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000478943.5
ENST00000581396.5
CDS-3UTR TCA 90 bp GTGCAGGCCGTGTGGAGCTGGGGATGTAGGAGTGGCCAGTGCCCGGTGTCCACGGCCTGGGCTGGCAGCTaGATGATGGAGAGAGGGTCA +
Preference number: 4 (lower is better)
Translates to: VQAVWSWGCRSGQCPVSTAWAGS*MMERGS
Trigger: TGACCCTCTCTCCATCATTCAGCTGCCAGCCCAGGC...CGTGGACACCGGGCACTGGCCACTCCTACATCCCCAGCTCCACACGGCCTGCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000478943.5
ENST00000581396.5
CDS-3UTR TCA 90 bp AGGGCGGGGCCGGGCGTGCTCTTTCTCCATGGGCGGGTGGAGGAAAGACAGTCCGCTGGCTCTTCCCTCTaGGGACACTGGGTCTGGGAT +
Preference number: 4 (lower is better)
Translates to: RAGPGVLFLHGRVEERQSAGSSL*GHWVWD
Trigger: ATCCCAGACCCAGTGTCCTCAGAGGGAAGAGCCAGC...GGACTGTCTTTCCTCCACCCGCCCATGGAGAAAGAGCACGCCCGGCCCCGCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR GCA 90 bp TGGGAGCAGACACGGTGGCATTTCCATGGAAACACAGGTGTGCAGGCCGTGTGGCCGGTGTCCACGGGGTaGGAGCGGGGACCCGCCATC +
Preference number: 4 (lower is better)
Translates to: WEQTRWHFHGNTGVQAVWPVSTG*ERGPAI
Trigger: GATGGCGGGTCCCCGCTCGCACCCCGTGGACACCGG...CCACACGGCCTGCACACCTGTGTTTCCATGGAAATGCCACCGTGTCTGCTCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000535933.5
ENST00000540946.5
ENST00000581396.5
CDS-3UTR GCA 90 bp CTGGGAGCAGACACGGTGGCATTTCCATGGAAACACAGGTGTGCAGGCCGTGTGCCGGTGTCCACGGGGTaGGAGCGGGGACCCGCCATC +
Preference number: 4 (lower is better)
Translates to: LGADTVAFPWKHRCAGRVPVSTG*ERGPAI
Trigger: GATGGCGGGTCCCCGCTCGCACCCCGTGGACACCGG...CACACGGCCTGCACACCTGTGTTTCCATGGAAATGCCACCGTGTCTGCTCCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000535933.5
ENST00000540946.5
ENST00000581396.5
CDS-3UTR GCA 90 bp GGGGCCGGGCGTGCTCTTTCTCCATGGGCGGGTGGAGGAAAGACAGTCCGGGTGACAGTCCGGGTGGTCTaGTCAGGAAGCACTGCCTGG +
Preference number: 4 (lower is better)
Translates to: GAGRALSPWAGGGKTVRVTVRVV*SGSTAW
Trigger: CCAGGCAGTGCTTCCTGAGCAGACCACCCGGACTGT...CACCCGGACTGTCTTTCCTCCACCCGCCCATGGAGAAAGAGCACGCCCGGCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000478943.5
ENST00000581396.5
CDS-3UTR GCA 90 bp GTGTGGAGCTGGGGATGTAGGAGTGGCCAGTGCCCGGTGTCCACGGGGTGCGAGCCCAGGAGGGCAGAATaGCTGAGAAGGTCGCTGAGC +
Preference number: 4 (lower is better)
Translates to: VWSWGCRSGQCPVSTGCEPRRAE*LRRSLS
Trigger: GCTCAGCGACCTTCTCAGGCATTCTGCCCTCCTGGG...CTCGCACCCCGTGGACACCGGGCACTGGCCACTCCTACATCCCCAGCTCCACAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000478943.5
ENST00000581396.5
CDS-3UTR GCA 90 bp CCCATGCACGCTGGTAAGCGAGCCAGTCATTCTCTCAGCCTGGCCACAGATGGCCCTGCCCAGGGAGCCTaGAGGGACCCTCGGTGCCAG +
Preference number: 4 (lower is better)
Translates to: PMHAGKRASHSLSLATDGPAQGA*RDPRCQ
Trigger: CTGGCACCGAGGGTCCCTGCAGGCTCCCTGGGCAGG...GCCATCTGTGGCCAGGCTGAGAGAATGACTGGCTCGCTTACCAGCGTGCATGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR GCA 90 bp AGAGGGTATCTGGAAGGAGGGCCAGTGGGGTGGATGGATGCTCTGAGCCTCGGGCTGCGGAGCACTGACTaGCCGAGGTCGGACCGCCCA +
Preference number: 4 (lower is better)
Translates to: RGYLEGGPVGWMDALSLGLRSTD*PRSDRP
Trigger: TGGGCGGTCCGACCTCGGGCAGTCAGTGCTCCGCAG...CCCGAGGCTCAGAGCATCCATCCACCCCACTGGCCCTCCTTCCAGATACCCTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR GCA 90 bp AGGCCGTGTGGAGCTGGGGATGTAGGAGTGGCCAGTGCCCGGTGTCCACGGGGTTGGCCAATGGCCTCCTaGCAGCCCATACAGGTCCAC +
Preference number: 4 (lower is better)
Translates to: RPCGAGDVGVASARCPRGWPMAS*QPIQVH
Trigger: GTGGACCTGTATGGGCTGGCAGGAGGCCATTGGCCA...ACCCCGTGGACACCGGGCACTGGCCACTCCTACATCCCCAGCTCCACACGGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR GCA 90 bp GTGTGGAGCTGGGGATGTAGGAGTGGCCAGTGCCCGGTGTCCACGGGGTGCGAGTCAGTGCCTGGAGACTaGCCAGGCAGGGCTACTCTG +
Preference number: 4 (lower is better)
Translates to: VWSWGCRSGQCPVSTGCESVPGD*PGRATL
Trigger: CAGAGTAGCCCTGCCTGGGCAGTCTCCAGGCACTGA...CTCGCACCCCGTGGACACCGGGCACTGGCCACTCCTACATCCCCAGCTCCACAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR GCA 90 bp AGGGCGGGGCCGGGCGTGCTCTTTCTCCATGGGCGGGTGGAGGAAAGACAGTCCCCTGCGAGCATCTGTTaGCCTTGGGCCATGTGGAGC +
Preference number: 4 (lower is better)
Translates to: RAGPGVLFLHGRVEERQSPASIC*PWAMWS
Trigger: GCTCCACATGGCCCAAGGGCAACAGATGCTCGCAGG...GGACTGTCTTTCCTCCACCCGCCCATGGAGAAAGAGCACGCCCGGCCCCGCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR GCA 90 bp ACAGGGCGGGGCCGGGCGTGCTCTTTCTCCATGGGCGGGTGGAGGAAAGACAGTGCTCTGAGCCTCGGGTaGACTGACCCACCCTCCAGA +
Preference number: 4 (lower is better)
Translates to: TGRGRACSFSMGGWRKDSALSLG*TDPPSR
Trigger: TCTGGAGGGTGGGTCAGTGCACCCGAGGCTCAGAGC...ACTGTCTTTCCTCCACCCGCCCATGGAGAAAGAGCACGCCCGGCCCCGCCCTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR CCA 90 bp GGGGCCGGGCGTGCTCTTTCTCCATGGGCGGGTGGAGGAAAGACAGTCCGGGTGAGTCACACTCAGAGCTaGGGCCTGCGGTGCGGAGTA +
Preference number: 4 (lower is better)
Translates to: GAGRALSPWAGGGKTVRVSHTQS*GLRCGV
Trigger: TACTCCGCACCGCAGGCCCCAGCTCTGAGTGTGACT...CACCCGGACTGTCTTTCCTCCACCCGCCCATGGAGAAAGAGCACGCCCGGCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000581396.5
CDS-3UTR CCA 90 bp ACAGGTGTGCAGGCCGTGTGGAGCTGGGGATGTAGGAGTGGCCAGTGCCCGGTGGGAGGAGAGGGAAGATaGGGGCGCTGTGTTCCCCAC +
Preference number: 4 (lower is better)
Translates to: TGVQAVWSWGCRSGQCPVGGEGR*GRCVPH
Trigger: GTGGGGAACACAGCGCCCCCATCTTCCCTCTCCTCC...CACCGGGCACTGGCCACTCCTACATCCCCAGCTCCACACGGCCTGCACACCTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000535933.5
ENST00000540946.5
ENST00000581396.5
CDS-3UTR CCA 90 bp CAGGTGTGCAGGCCGTGTGGAGCTGGGGATGTAGGAGTGGCCAGTGCCCGGTGTGGAGGAGAGGGAAGATaGGGGCGCTGTGTTCCCCAC +
Preference number: 4 (lower is better)
Translates to: QVCRPCGAGDVGVASARCGGEGR*GRCVPH
Trigger: GTGGGGAACACAGCGCCCCCATCTTCCCTCTCCTCC...ACACCGGGCACTGGCCACTCCTACATCCCCAGCTCCACACGGCCTGCACACCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000535933.5
ENST00000540946.5
ENST00000581396.5
CDS-3UTR CCA 90 bp GTGTGGAGCTGGGGATGTAGGAGTGGCCAGTGCCCGGTGTCCACGGGGTGCGAGGTCGTCCATGACAGATaGCTGCGCAACGGGGATCCC +
Preference number: 4 (lower is better)
Translates to: VWSWGCRSGQCPVSTGCEVVHDR*LRNGDP
Trigger: GGGATCCCCGTTGCGCAGCCATCTGTCATGGACGAC...CTCGCACCCCGTGGACACCGGGCACTGGCCACTCCTACATCCCCAGCTCCACAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000581396.5
CDS-3UTR CCA 90 bp CAGACACGGTGGCATTTCCATGGAAACACAGGTGTGCAGGCCGTGTGGAGCTGGGGGCAGGAGCCTCCATaGGGGGCGAGGGGAGGTCGG +
Preference number: 4 (lower is better)
Translates to: QTRWHFHGNTGVQAVWSWGQEPP*GARGGR
Trigger: CCGACCTCCCCTCGCCCCCCATGGAGGCTCCTGCCC...CCAGCTCCACACGGCCTGCACACCTGTGTTTCCATGGAAATGCCACCGTGTCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000535933.5
ENST00000540946.5
ENST00000581396.5
CDS-3UTR CCA 90 bp AGTGGGAGGCCTGGGAGCAGACACGGTGGCATTTCCATGGAAACACAGGTGTGCGGGCAGGAGCCTCCATaGGGGGCGAGGGGAGGTCGG +
Preference number: 4 (lower is better)
Translates to: SGRPGSRHGGISMETQVCGQEPP*GARGGR
Trigger: CCGACCTCCCCTCGCCCCCCATGGAGGCTCCTGCCC...GCACACCTGTGTTTCCATGGAAATGCCACCGTGTCTGCTCCCAGGCCTCCCACT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000535933.5
ENST00000540946.5
ENST00000581396.5
CDS-3UTR CCA 90 bp CAGGTGTGCAGGCCGTGTGGAGCTGGGGATGTAGGAGTGGCCAGTGCCCGGTGTCAGGCCGTGTGGAGCTaGGGATGTAGGAGTGGCCAG +
Preference number: 4 (lower is better)
Translates to: QVCRPCGAGDVGVASARCQAVWS*GCRSGQ
Trigger: CTGGCCACTCCTACATCCCCAGCTCCACACGGCCTG...ACACCGGGCACTGGCCACTCCTACATCCCCAGCTCCACACGGCCTGCACACCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000535933.5
ENST00000540946.5
ENST00000581396.5
CDS-3UTR CCA 90 bp GTGTGCAGGCCGTGTGGAGCTGGGGATGTAGGAGTGGCCAGTGCCCGGTGTCCACAGGCCGTGTGGAGCTaGGGATGTAGGAGTGGCCAG +
Preference number: 4 (lower is better)
Translates to: VCRPCGAGDVGVASARCPQAVWS*GCRSGQ
Trigger: CTGGCCACTCCTACATCCCCAGCTCCACACGGCCTG...TGGACACCGGGCACTGGCCACTCCTACATCCCCAGCTCCACACGGCCTGCACAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000535933.5
ENST00000540946.5
ENST00000581396.5
CDS-3UTR CCA 90 bp GGAGTGGCCAGTGCCCGGTGTCCACGGGGTGCGAGCGGGGACCCGCCATCTGGGAGTGAGGACACGGGATaGGAATACATGTTACCAGCC +
Preference number: 4 (lower is better)
Translates to: GVASARCPRGASGDPPSGSEDTG*EYMLPA
Trigger: GGCTGGTAACATGTATTCCCATCCCGTGTCCTCACT...CCCAGATGGCGGGTCCCCGCTCGCACCCCGTGGACACCGGGCACTGGCCACTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR CCA 90 bp GAGGTGCAAGCAGGCCACCTGAGGGGTGGCTCCAGGCTAGGAAGGCAGGTGACATCCCTGCTTGGCTGGTaGTCTGGGCCGTCCTGCCAG +
Preference number: 4 (lower is better)
Translates to: EVQAGHLRGGSRLGRQVTSLLGW*SGPSCQ
Trigger: CTGGCAGGACGGCCCAGACCACCAGCCAAGCAGGGA...TGTCACCTGCCTTCCTAGCCTGGAGCCACCCCTCAGGTGGCCTGCTTGCACCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR CCA 90 bp AACACAGGTGTGCAGGCCGTGTGGAGCTGGGGATGTAGGAGTGGCCAGTGCCCGCCTGGCACAGGGTCCTaGGTCGGGCAGCACTTGCTC +
Preference number: 4 (lower is better)
Translates to: NTGVQAVWSWGCRSGQCPPGTGS*VGQHLL
Trigger: GAGCAAGTGCTGCCCGACCCAGGACCCTGTGCCAGG...CGGGCACTGGCCACTCCTACATCCCCAGCTCCACACGGCCTGCACACCTGTGTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR CCA 90 bp AACACAGGTGTGCAGGCCGTGTGGAGCTGGGGATGTAGGAGTGGCCAGTGCCCGAGGCAGCCAAAGGGCTaGGGCCTCTGGGTGCACCTG +
Preference number: 4 (lower is better)
Translates to: NTGVQAVWSWGCRSGQCPRQPKG*GLWVHL
Trigger: CAGGTGCACCCAGAGGCCCCAGCCCTTTGGCTGCCT...CGGGCACTGGCCACTCCTACATCCCCAGCTCCACACGGCCTGCACACCTGTGTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR TCA 90 bp AGGCCTGGGAGCAGACACGGTGGCATTTCCATGGAAACACAGGTGTGCAGGCCGCCGGCCAGAAGGGTTTaGGGCTGGGGCAGGAGCCTC +
Preference number: 4 (lower is better)
Translates to: RPGSRHGGISMETQVCRPPARRV*GWGRSL
Trigger: GAGGCTCCTGCCCCAGCCTCAAACCCTTCTGGCCGG...CGGCCTGCACACCTGTGTTTCCATGGAAATGCCACCGTGTCTGCTCCCAGGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000535933.5
ENST00000540946.5
ENST00000581396.5
CDS-3UTR TCA 90 bp CAGGTGTGCAGGCCGTGTGGAGCTGGGGATGTAGGAGTGGCCAGTGCCCGGTGTGAAGAGGGCATCCTCTaGCCGCTCTGGCTTCTTCCG +
Preference number: 4 (lower is better)
Translates to: QVCRPCGAGDVGVASARCEEGIL*PLWLLP
Trigger: CGGAAGAAGCCAGAGCGGTCAGAGGATGCCCTCTTC...ACACCGGGCACTGGCCACTCCTACATCCCCAGCTCCACACGGCCTGCACACCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000535933.5
ENST00000540946.5
ENST00000581396.5
CDS-3UTR TCA 90 bp AGGGCGGGGCCGGGCGTGCTCTTTCTCCATGGGCGGGTGGAGGAAAGACAGTCCGACAAGTCCAAGGAGTaGGACCAGGCCCATGAGTGC +
Preference number: 4 (lower is better)
Translates to: RAGPGVLFLHGRVEERQSDKSKE*DQAHEC
Trigger: GCACTCATGGGCCTGGTCTCACTCCTTGGACTTGTC...GGACTGTCTTTCCTCCACCCGCCCATGGAGAAAGAGCACGCCCGGCCCCGCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000478943.5
ENST00000581396.5
CDS-3UTR TCA 90 bp GGGGCCGGGCGTGCTCTTTCTCCATGGGCGGGTGGAGGAAAGACAGTCCGGGTGAGAGGGTCAAGAAGGTaGGAGACCCCCACCATGGAG +
Preference number: 4 (lower is better)
Translates to: GAGRALSPWAGGGKTVRVRGSRR*ETPTME
Trigger: CTCCATGGTGGGGGTCTCTCACCTTCTTGACCCTCT...CACCCGGACTGTCTTTCCTCCACCCGCCCATGGAGAAAGAGCACGCCCGGCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000478943.5
ENST00000581396.5
CDS-3UTR TCA 90 bp CCGCCCACCACCCGCAGGCCCAGCTCTGGCAGGGCCTCAGAGACAACCCAAGTCTGTGCACAACGCCGGTaGGATCAGGACTGCTTCGAA +
Preference number: 4 (lower is better)
Translates to: PPTTRRPSSGRASETTQVCAQRR*DQDCFE
Trigger: TTCGAAGCAGTCCTGATCTCACCGGCGTTGTGCACA...GACTTGGGTTGTCTCTGAGGCCCTGCCAGAGCTGGGCCTGCGGGTGGTGGGCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR TCA 90 bp GAAACACAGGTGTGCAGGCCGTGTGGAGCTGGGGATGTAGGAGTGGCCAGTGCCTGGCCAGAGGACCTCTaGGGTGGGAGGAGGCCAGAC +
Preference number: 4 (lower is better)
Translates to: ETQVCRPCGAGDVGVASAWPEDL*GGRRPD
Trigger: GTCTGGCCTCCTCCCACCTCAGAGGTCCTCTGGCCA...GGCACTGGCCACTCCTACATCCCCAGCTCCACACGGCCTGCACACCTGTGTTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR TCA 90 bp AGGGCGGGGCCGGGCGTGCTCTTTCTCCATGGGCGGGTGGAGGAAAGACAGTCCGAGCCTCCAGGCTCCTaGCTTTTTGGGACTCCTGGT +
Preference number: 4 (lower is better)
Translates to: RAGPGVLFLHGRVEERQSEPPGS*LFGTPG
Trigger: ACCAGGAGTCCCAAAAAGTCAGGAGCCTGGAGGCTC...GGACTGTCTTTCCTCCACCCGCCCATGGAGAAAGAGCACGCCCGGCCCCGCCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR TCA 90 bp AGGCCTGGGAGCAGACACGGTGGCATTTCCATGGAAACACAGGTGTGCAGGCCGGCCGGACTCCCGTCCTaGCTGACACTTGCCCCCTCC +
Preference number: 4 (lower is better)
Translates to: RPGSRHGGISMETQVCRPAGLPS*LTLAPS
Trigger: GGAGGGGGCAAGTGTCAGTCAGGACGGGAGTCCGGC...CGGCCTGCACACCTGTGTTTCCATGGAAATGCCACCGTGTCTGCTCCCAGGCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000535933.5
CDS-3UTR GCA 90 bp AGGGCGGGGCCGGGCGTGCTCTTTCTCCATGGGCGGGTGGAGGAAAGACAGTCCCAGGGAGCCATCTGTTaGCTTTTCGAGGCACTGCCC +
Preference number: 4 (lower is better)
Translates to: RAGPGVLFLHGRVEERQSQGAIC*LFEALP
Trigger: GGGCAGTGCCTCGAAAAGGCAACAGATGGCTCCCTG...GGACTGTCTTTCCTCCACCCGCCCATGGAGAAAGAGCACGCCCGGCCCCGCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000581396.5
CDS-3UTR GCA 90 bp GTGCAGGCCGTGTGGAGCTGGGGATGTAGGAGTGGCCAGTGCCCGGTGTCCACGCAGGGAGCCATCTGTTaGCTTTTCGAGGCACTGCCC +
Preference number: 4 (lower is better)
Translates to: VQAVWSWGCRSGQCPVSTQGAIC*LFEALP
Trigger: GGGCAGTGCCTCGAAAAGGCAACAGATGGCTCCCTG...CGTGGACACCGGGCACTGGCCACTCCTACATCCCCAGCTCCACACGGCCTGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000535933.5
ENST00000540946.5
ENST00000581396.5
CDS-3UTR GCA 90 bp AGGCCGTGTGGAGCTGGGGATGTAGGAGTGGCCAGTGCCCGGTGTCCACGGGGTCCAGCACTTGTCCTCTaGTGTGATTGGGACCTGGGC +
Preference number: 4 (lower is better)
Translates to: RPCGAGDVGVASARCPRGPALVL*CDWDLG
Trigger: GCCCAGGTCCCAATCACAGCAGAGGACAAGTGCTGG...ACCCCGTGGACACCGGGCACTGGCCACTCCTACATCCCCAGCTCCACACGGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000581396.5
CDS-3UTR GCA 90 bp GGTGCCAGGGGCCCAACTGCACATAGCGCCATTCTCTGCCGCCCAGTGGCCAAAAGCTCCACGATGCGCTaGTGCATGGCCCGACAGGTC +
Preference number: 4 (lower is better)
Translates to: GARGPTAHSAILCRPVAKSSTMR*CMARQV
Trigger: GACCTGTCGGGCCATGCAGCAGCGCATCGTGGAGCT...TTTGGCCACTGGGCGGCAGAGAATGGCGCTATGTGCAGTTGGGCCCCTGGCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR GCA 90 bp GGCATTTCCATGGAAACACAGGTGTGCAGGCCGTGTGGAGCTGGGGATGTAGGACCGGTGTCCACGGGGTaGGAGCGGGGACCCGCCATC +
Preference number: 4 (lower is better)
Translates to: GISMETQVCRPCGAGDVGPVSTG*ERGPAI
Trigger: GATGGCGGGTCCCCGCTCGCACCCCGTGGACACCGG...TCCTACATCCCCAGCTCCACACGGCCTGCACACCTGTGTTTCCATGGAAATGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000535933.5
ENST00000540946.5
ENST00000581396.5
CDS-3UTR GCA 90 bp GAAAAGAAGTGGCTGAAGCTGGTCCTGACTAGTGGGAGGCCTGGGAGCAGACACCCGGTGTCCACGGGGTaGGAGCGGGGACCCGCCATC +
Preference number: 4 (lower is better)
Translates to: EKKWLKLVLTSGRPGSRHPVSTG*ERGPAI
Trigger: GATGGCGGGTCCCCGCTCGCACCCCGTGGACACCGG...GTGTCTGCTCCCAGGCCTCCCACTAGTCAGGACCAGCTTCAGCCACTTCTTTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000535933.5
ENST00000581396.5
CDS-3UTR GCA 90 bp ACAGGTGTGCAGGCCGTGTGGAGCTGGGGATGTAGGAGTGGCCAGTGCCCGGTGACAGTCCGGGTGGTCTaGTCAGGAAGCACTGCCTGG +
Preference number: 4 (lower is better)
Translates to: TGVQAVWSWGCRSGQCPVTVRVV*SGSTAW
Trigger: CCAGGCAGTGCTTCCTGAGCAGACCACCCGGACTGT...CACCGGGCACTGGCCACTCCTACATCCCCAGCTCCACACGGCCTGCACACCTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000478943.5
ENST00000581396.5
CDS-3UTR GCA 90 bp CTAGTGGGAGGCCTGGGAGCAGACACGGTGGCATTTCCATGGAAACACAGGTGTGGGCGGGGCCGGGCGTaGTCTTTCTCCATGGGCGGG +
Preference number: 4 (lower is better)
Translates to: LVGGLGADTVAFPWKHRCGRGRA*SFSMGG
Trigger: CCCGCCCATGGAGAAAGAGCACGCCCGGCCCCGCCC...ACACCTGTGTTTCCATGGAAATGCCACCGTGTCTGCTCCCAGGCCTCCCACTAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000478943.5
ENST00000581396.5
CDS-3UTR GCA 90 bp AGCAGACACGGTGGCATTTCCATGGAAACACAGGTGTGCAGGCCGTGTGGAGCTGGGCGGGGCCGGGCGTaGTCTTTCTCCATGGGCGGG +
Preference number: 4 (lower is better)
Translates to: SRHGGISMETQVCRPCGAGRGRA*SFSMGG
Trigger: CCCGCCCATGGAGAAAGAGCACGCCCGGCCCCGCCC...AGCTCCACACGGCCTGCACACCTGTGTTTCCATGGAAATGCCACCGTGTCTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000478943.5
ENST00000581396.5
CDS-3UTR GCA 90 bp ACAGGTGTGCAGGCCGTGTGGAGCTGGGGATGTAGGAGTGGCCAGTGCCCGGTGCATCTGCGGGCTGCCTaGTGCCCTCCCAATTGTCCT +
Preference number: 4 (lower is better)
Translates to: TGVQAVWSWGCRSGQCPVHLRAA*CPPNCP
Trigger: AGGACAATTGGGAGGGCAGCAGGCAGCCCGCAGATG...CACCGGGCACTGGCCACTCCTACATCCCCAGCTCCACACGGCCTGCACACCTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000478943.5
ENST00000581396.5
CDS-3UTR GCA 90 bp GTGCAGGCCGTGTGGAGCTGGGGATGTAGGAGTGGCCAGTGCCCGGTGTCCACGATGACCCGAGTCCCTTaGCCATGGCCAGGAGACACA +
Preference number: 4 (lower is better)
Translates to: VQAVWSWGCRSGQCPVSTMTRVP*PWPGDT
Trigger: TGTGTCTCCTGGCCATGGGCAAGGGACTCGGGTCAT...CGTGGACACCGGGCACTGGCCACTCCTACATCCCCAGCTCCACACGGCCTGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR GCA 90 bp GGAGGCCTGGGAGCAGACACGGTGGCATTTCCATGGAAACACAGGTGTGCAGGCCTGCGGAGCACTGACTaGCCGAGGTCGGACCGCCCA +
Preference number: 4 (lower is better)
Translates to: GGLGADTVAFPWKHRCAGLRSTD*PRSDRP
Trigger: TGGGCGGTCCGACCTCGGGCAGTCAGTGCTCCGCAG...GCCTGCACACCTGTGTTTCCATGGAAATGCCACCGTGTCTGCTCCCAGGCCTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR GCA 90 bp TGCAGGCCGTGTGGAGCTGGGGATGTAGGAGTGGCCAGTGCCCGGTGTCCACGGAGGCTGAAGCCAGGCTaGAAGCAAGTGCTCCTCCAC +
Preference number: 4 (lower is better)
Translates to: CRPCGAGDVGVASARCPRRLKPG*KQVLLH
Trigger: GTGGAGGAGCACTTGCTTGCAGCCTGGCTTCAGCCT...CCGTGGACACCGGGCACTGGCCACTCCTACATCCCCAGCTCCACACGGCCTGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR CCA 90 bp TGCAGGCCGTGTGGAGCTGGGGATGTAGGAGTGGCCAGTGCCCGGTGTCCACGGGGGCATGGTCGCAGCTaGATCCACTTCAGGGACACT +
Preference number: 4 (lower is better)
Translates to: CRPCGAGDVGVASARCPRGHGRS*IHFRDT
Trigger: AGTGTCCCTGAAGTGGATCCAGCTGCGACCATGCCC...CCGTGGACACCGGGCACTGGCCACTCCTACATCCCCAGCTCCACACGGCCTGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000581396.5
CDS-3UTR CCA 90 bp GTGTGGAGCTGGGGATGTAGGAGTGGCCAGTGCCCGGTGTCCACGGGGTGCGAGTGTGTTCCCCACCATTaGGCTCACCACGGCTGGAGA +
Preference number: 4 (lower is better)
Translates to: VWSWGCRSGQCPVSTGCECVPHH*AHHGWR
Trigger: TCTCCAGCCGTGGTGAGCCCAATGGTGGGGAACACA...CTCGCACCCCGTGGACACCGGGCACTGGCCACTCCTACATCCCCAGCTCCACAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000535933.5
ENST00000540946.5
ENST00000581396.5
CDS-3UTR CCA 90 bp CCGCCCACCACCCGCAGGCCCAGCTCTGGCAGGGCCTCAGAGACAACCCAAGTCTCTAAGCCTGCAAGCTaGGAGGAGAGGGAAGATGGG +
Preference number: 4 (lower is better)
Translates to: PPTTRRPSSGRASETTQVSKPAS*EEREDG
Trigger: CCCATCTTCCCTCTCCTCCCAGCTTGCAGGCTTAGA...GACTTGGGTTGTCTCTGAGGCCCTGCCAGAGCTGGGCCTGCGGGTGGTGGGCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR CCA 90 bp ACAGGTGTGCAGGCCGTGTGGAGCTGGGGATGTAGGAGTGGCCAGTGCCCGGTGGTCGTCCATGACAGATaGCTGCGCAACGGGGATCCC +
Preference number: 4 (lower is better)
Translates to: TGVQAVWSWGCRSGQCPVVVHDR*LRNGDP
Trigger: GGGATCCCCGTTGCGCAGCCATCTGTCATGGACGAC...CACCGGGCACTGGCCACTCCTACATCCCCAGCTCCACACGGCCTGCACACCTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000581396.5
CDS-3UTR CCA 90 bp GGCATTTCCATGGAAACACAGGTGTGCAGGCCGTGTGGAGCTGGGGATGTAGGAGGGCAGGAGCCTCCATaGGGGGCGAGGGGAGGTCGG +
Preference number: 4 (lower is better)
Translates to: GISMETQVCRPCGAGDVGGQEPP*GARGGR
Trigger: CCGACCTCCCCTCGCCCCCCATGGAGGCTCCTGCCC...TCCTACATCCCCAGCTCCACACGGCCTGCACACCTGTGTTTCCATGGAAATGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000535933.5
ENST00000540946.5
ENST00000581396.5
CDS-3UTR CCA 90 bp CCCAGGAGGGCAGAATGCCTGAGAAGGTCGCTGAGCCAGGCAGAGGTGAGCACACGGGGACCCGCCATCTaGGGAGGCAAACCACAGAGC +
Preference number: 4 (lower is better)
Translates to: PRRAECLRRSLSQAEVSTRGPAI*GGKPQS
Trigger: GCTCTGTGGTTTGCCTCCCCAGATGGCGGGTCCCCG...TGTGCTCACCTCTGCCTGGCTCAGCGACCTTCTCAGGCATTCTGCCCTCCTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000478943.5
ENST00000581396.5
CDS-3UTR CCA 90 bp AACACAGGTGTGCAGGCCGTGTGGAGCTGGGGATGTAGGAGTGGCCAGTGCCCGCAGGCCGTGTGGAGCTaGGGATGTAGGAGTGGCCAG +
Preference number: 4 (lower is better)
Translates to: NTGVQAVWSWGCRSGQCPQAVWS*GCRSGQ
Trigger: CTGGCCACTCCTACATCCCCAGCTCCACACGGCCTG...CGGGCACTGGCCACTCCTACATCCCCAGCTCCACACGGCCTGCACACCTGTGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000535933.5
ENST00000540946.5
ENST00000581396.5
CDS-3UTR CCA 90 bp GTGTGCAGGCCGTGTGGAGCTGGGGATGTAGGAGTGGCCAGTGCCCGGTGTCCAGGTGTGCAGGCCGTGTaGAGCTGGGGATGTAGGAGT +
Preference number: 4 (lower is better)
Translates to: VCRPCGAGDVGVASARCPGVQAV*SWGCRS
Trigger: ACTCCTACATCCCCAGCTCCACACGGCCTGCACACC...TGGACACCGGGCACTGGCCACTCCTACATCCCCAGCTCCACACGGCCTGCACAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000535933.5
ENST00000540946.5
ENST00000581396.5
CDS-3UTR CCA 90 bp GTGTGGAGCTGGGGATGTAGGAGTGGCCAGTGCCCGGTGTCCACGGGGTGCGAGAGGGGAGAGAGTCTCTaGCTGCAGTTGTCCCACCAC +
Preference number: 4 (lower is better)
Translates to: VWSWGCRSGQCPVSTGCERGESL*LQLSHH
Trigger: GTGGTGGGACAACTGCAGCCAGAGACTCTCTCCCCT...CTCGCACCCCGTGGACACCGGGCACTGGCCACTCCTACATCCCCAGCTCCACAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000581396.5
CDS-3UTR CCA 90 bp AGGCCGTGTGGAGCTGGGGATGTAGGAGTGGCCAGTGCCCGGTGTCCACGGGGTAGGGGAGAGAGTCTCTaGCTGCAGTTGTCCCACCAC +
Preference number: 4 (lower is better)
Translates to: RPCGAGDVGVASARCPRGRGESL*LQLSHH
Trigger: GTGGTGGGACAACTGCAGCCAGAGACTCTCTCCCCT...ACCCCGTGGACACCGGGCACTGGCCACTCCTACATCCCCAGCTCCACACGGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000581396.5
CDS-3UTR CCA 90 bp GGGGCCGGGCGTGCTCTTTCTCCATGGGCGGGTGGAGGAAAGACAGTCCGGGTGTTCTCCATGGGCGGGTaGAGGAAAGACAGTCCGGGT +
Preference number: 4 (lower is better)
Translates to: GAGRALSPWAGGGKTVRVFSMGG*RKDSPG
Trigger: ACCCGGACTGTCTTTCCTCCACCCGCCCATGGAGAA...CACCCGGACTGTCTTTCCTCCACCCGCCCATGGAGAAAGAGCACGCCCGGCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000478943.5
ENST00000581396.5
CDS-3UTR CCA 90 bp CAGGTGTGCAGGCCGTGTGGAGCTGGGGATGTAGGAGTGGCCAGTGCCCGGTGTGAGAGACCCCCACCATaGAGACCCAGCAGAGCCTTC +
Preference number: 4 (lower is better)
Translates to: QVCRPCGAGDVGVASARCERPPP*RPSRAF
Trigger: GAAGGCTCTGCTGGGTCTCCATGGTGGGGGTCTCTC...ACACCGGGCACTGGCCACTCCTACATCCCCAGCTCCACACGGCCTGCACACCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000478943.5
ENST00000581396.5
CDS-3UTR CCA 90 bp AGGCCTGGGAGCAGACACGGTGGCATTTCCATGGAAACACAGGTGTGCAGGCCGAGCTGGCGCTGGCGCTaGAGCTGGAGCGGGGCAGTT +
Preference number: 4 (lower is better)
Translates to: RPGSRHGGISMETQVCRPSWRWR*SWSGAV
Trigger: AACTGCCCCGCTCCAGCTCCAGCGCCAGCGCCAGCT...CGGCCTGCACACCTGTGTTTCCATGGAAATGCCACCGTGTCTGCTCCCAGGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR CCA 90 bp ACAGGTGTGCAGGCCGTGTGGAGCTGGGGATGTAGGAGTGGCCAGTGCCCGGTGCTCTCCAATGATGCCTaGCAACCAGCTGGCGCTGGC +
Preference number: 4 (lower is better)
Translates to: TGVQAVWSWGCRSGQCPVLSNDA*QPAGAG
Trigger: GCCAGCGCCAGCTGGTTGCCAGGCATCATTGGAGAG...CACCGGGCACTGGCCACTCCTACATCCCCAGCTCCACACGGCCTGCACACCTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR CCA 90 bp GGCCAGACTGTCAGGAGAGTCTGTGCAAGGAGGCCAAGGCCTATGCCAGGGAGCCAGGCCAAAGGCCCATaGTGCCAGGGGCCCAACTGC +
Preference number: 4 (lower is better)
Translates to: GQTVRRVCARRPRPMPGSQAKGP*CQGPNC
Trigger: GCAGTTGGGCCCCTGGCACCATGGGCCTTTGGCCTG...GCTCCCTGGCATAGGCCTTGGCCTCCTTGCACAGACTCTCCTGACAGTCTGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR CCA 90 bp GTGCAGGCCGTGTGGAGCTGGGGATGTAGGAGTGGCCAGTGCCCGGTGTCCACGAGCATCTGTTGCCCTTaGGCCATGTGGAGCCCTTGC +
Preference number: 4 (lower is better)
Translates to: VQAVWSWGCRSGQCPVSTSICCP*AMWSPC
Trigger: GCAAGGGCTCCACATGGCCCAAGGGCAACAGATGCT...CGTGGACACCGGGCACTGGCCACTCCTACATCCCCAGCTCCACACGGCCTGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR CCA 90 bp CTCAGAGAAAAGAAGTGGCTGAAGCTGGTCCTGACTAGTGGGAGGCCTGGGAGCTGCGGGGGCCCAGGGTaGGGTGTGGCAGCGGGAAGG +
Preference number: 4 (lower is better)
Translates to: LREKKWLKLVLTSGRPGSCGGPG*GVAAGR
Trigger: CCTTCCCGCTGCCACACCCCACCCTGGGCCCCCGCA...GCTCCCAGGCCTCCCACTAGTCAGGACCAGCTTCAGCCACTTCTTTTCTCTGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR CCA 90 bp CCCATGCACGCTGGTAAGCGAGCCAGTCATTCTCTCAGCCTGGCCACAGATGGCTGGCCTGGCCCCAGGTaGGCCCATGGCCTACCCCAA +
Preference number: 4 (lower is better)
Translates to: PMHAGKRASHSLSLATDGWPGPR*AHGLPQ
Trigger: TTGGGGTAGGCCATGGGCCCACCTGGGGCCAGGCCA...GCCATCTGTGGCCAGGCTGAGAGAATGACTGGCTCGCTTACCAGCGTGCATGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR CCA 90 bp AGGGCGGGGCCGGGCGTGCTCTTTCTCCATGGGCGGGTGGAGGAAAGACAGTCCTCTCAAAAAGCTGCCTaGGCCTTGGGGCCTGCCAGA +
Preference number: 4 (lower is better)
Translates to: RAGPGVLFLHGRVEERQSSQKAA*ALGPAR
Trigger: TCTGGCAGGCCCCAAGGCCCAGGCAGCTTTTTGAGA...GGACTGTCTTTCCTCCACCCGCCCATGGAGAAAGAGCACGCCCGGCCCCGCCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000478943.5
CDS-3UTR TCA 90 bp AGGGCGGGGCCGGGCGTGCTCTTTCTCCATGGGCGGGTGGAGGAAAGACAGTCCACTTGTCCTCTGCTGTaGTTGGGACCTGGGCATGGT +
Preference number: 4 (lower is better)
Translates to: RAGPGVLFLHGRVEERQSTCPLL*LGPGHG
Trigger: ACCATGCCCAGGTCCCAATCACAGCAGAGGACAAGT...GGACTGTCTTTCCTCCACCCGCCCATGGAGAAAGAGCACGCCCGGCCCCGCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000581396.5
CDS-3UTR TCA 90 bp GTGCAGGCCGTGTGGAGCTGGGGATGTAGGAGTGGCCAGTGCCCGGTGTCCACGACTTGTCCTCTGCTGTaGTTGGGACCTGGGCATGGT +
Preference number: 4 (lower is better)
Translates to: VQAVWSWGCRSGQCPVSTTCPLL*LGPGHG
Trigger: ACCATGCCCAGGTCCCAATCACAGCAGAGGACAAGT...CGTGGACACCGGGCACTGGCCACTCCTACATCCCCAGCTCCACACGGCCTGCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000581396.5
CDS-3UTR TCA 90 bp GAAACACAGGTGTGCAGGCCGTGTGGAGCTGGGGATGTAGGAGTGGCCAGTGCCTGGACACGCGGGAGATaGGCTCCACGATGCGCTGCT +
Preference number: 4 (lower is better)
Translates to: ETQVCRPCGAGDVGVASAWTRGR*APRCAA
Trigger: AGCAGCGCATCGTGGAGCTCATCTCCCGCGTGTCCA...GGCACTGGCCACTCCTACATCCCCAGCTCCACACGGCCTGCACACCTGTGTTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000535933.5
ENST00000540946.5
ENST00000581396.5
CDS-3UTR TCA 90 bp ACAGGGCGGGGCCGGGCGTGCTCTTTCTCCATGGGCGGGTGGAGGAAAGACAGTCCTTCAGGTCGGTCCTaGGCCACACCTCAATGTCGT +
Preference number: 4 (lower is better)
Translates to: TGRGRACSFSMGGWRKDSPSGRS*ATPQCR
Trigger: ACGACATTGAGGTGTGGCTCAGGACCGACCTGAAGG...ACTGTCTTTCCTCCACCCGCCCATGGAGAAAGAGCACGCCCGGCCCCGCCCTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000478943.5
ENST00000581396.5
CDS-3UTR TCA 90 bp CCTGGGAGCAGACACGGTGGCATTTCCATGGAAACACAGGTGTGCAGGCCGTGTCCGGCCAGAAGGGTTTaGGGCTGGGGCAGGAGCCTC +
Preference number: 4 (lower is better)
Translates to: PGSRHGGISMETQVCRPCPARRV*GWGRSL
Trigger: GAGGCTCCTGCCCCAGCCTCAAACCCTTCTGGCCGG...ACACGGCCTGCACACCTGTGTTTCCATGGAAATGCCACCGTGTCTGCTCCCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000535933.5
ENST00000540946.5
ENST00000581396.5
CDS-3UTR TCA 90 bp CTGGGAGCAGACACGGTGGCATTTCCATGGAAACACAGGTGTGCAGGCCGTGTGCCGGCCAGAAGGGTTTaGGGCTGGGGCAGGAGCCTC +
Preference number: 4 (lower is better)
Translates to: LGADTVAFPWKHRCAGRVPARRV*GWGRSL
Trigger: GAGGCTCCTGCCCCAGCCTCAAACCCTTCTGGCCGG...CACACGGCCTGCACACCTGTGTTTCCATGGAAATGCCACCGTGTCTGCTCCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000535933.5
ENST00000540946.5
ENST00000581396.5
CDS-3UTR TCA 90 bp CAGGTGTGCAGGCCGTGTGGAGCTGGGGATGTAGGAGTGGCCAGTGCCCGGTGTGACAAGTCCAAGGAGTaGGACCAGGCCCATGAGTGC +
Preference number: 4 (lower is better)
Translates to: QVCRPCGAGDVGVASARCDKSKE*DQAHEC
Trigger: GCACTCATGGGCCTGGTCTCACTCCTTGGACTTGTC...ACACCGGGCACTGGCCACTCCTACATCCCCAGCTCCACACGGCCTGCACACCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000478943.5
ENST00000581396.5
CDS-3UTR TCA 90 bp AGGCCGTGTGGAGCTGGGGATGTAGGAGTGGCCAGTGCCCGGTGTCCACGGGGTAAGGCTGGGCCCAACTaGGTTAGAGATGCGTGTCTG +
Preference number: 4 (lower is better)
Translates to: RPCGAGDVGVASARCPRGKAGPN*VRDACL
Trigger: CAGACACGCATCTCTAACTCAGTTGGGCCCAGCCTT...ACCCCGTGGACACCGGGCACTGGCCACTCCTACATCCCCAGCTCCACACGGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR GCA 90 bp CTGAATGCTCCCCAACGACCATGTCGCTGGTCTCTTCTCCCGTCAAGCCCAGCCTGTAGGAGTGGCCAGTaGCCGGTGTCCACGGGGTGC +
Preference number: 4 (lower is better)
Translates to: LNAPQRPCRWSLLPSSPACRSGQ*PVSTGC
Trigger: GCACCCCGTGGACACCGGGCACTGGCCACTCCTACA...GGCTGGGCTTGACGGGAGAAGAGACCAGCGACATGGTCGTTGGGGAGCATTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR GCA 90 bp GTGTGCAGGCCGTGTGGAGCTGGGGATGTAGGAGTGGCCAGTGCCCGGTGTCCAATGGAAACACAGGTGTaGAGGCCGTGTGGAGCTGGG +
Preference number: 4 (lower is better)
Translates to: VCRPCGAGDVGVASARCPMETQV*RPCGAG
Trigger: CCCAGCTCCACACGGCCTGCACACCTGTGTTTCCAT...TGGACACCGGGCACTGGCCACTCCTACATCCCCAGCTCCACACGGCCTGCACAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000535933.5
ENST00000540946.5
ENST00000581396.5
CDS-3UTR GCA 90 bp ACAGGTGTGCAGGCCGTGTGGAGCTGGGGATGTAGGAGTGGCCAGTGCCCGGTGATGGAAACACAGGTGTaGAGGCCGTGTGGAGCTGGG +
Preference number: 4 (lower is better)
Translates to: TGVQAVWSWGCRSGQCPVMETQV*RPCGAG
Trigger: CCCAGCTCCACACGGCCTGCACACCTGTGTTTCCAT...CACCGGGCACTGGCCACTCCTACATCCCCAGCTCCACACGGCCTGCACACCTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000535933.5
ENST00000540946.5
ENST00000581396.5
CDS-3UTR GCA 90 bp TGCAGGCCGTGTGGAGCTGGGGATGTAGGAGTGGCCAGTGCCCGGTGTCCACGGGAGAGAGTCTCTGGCTaGAGTTGTCCCACCACTCAG +
Preference number: 4 (lower is better)
Translates to: CRPCGAGDVGVASARCPRERVSG*SCPTTQ
Trigger: CTGAGTGGTGGGACAACTGCAGCCAGAGACTCTCTC...CCGTGGACACCGGGCACTGGCCACTCCTACATCCCCAGCTCCACACGGCCTGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000581396.5
CDS-3UTR GCA 90 bp ATGGAAACACAGGTGTGCAGGCCGTGTGGAGCTGGGGATGTAGGAGTGGCCAGTGGGGCTGGGCCACTCTaGCCGCTCTTCCTGGGAGGA +
Preference number: 4 (lower is better)
Translates to: METQVCRPCGAGDVGVASGAGPL*PLFLGG
Trigger: TCCTCCCAGGAAGAGCGGGCAGAGTGGCCCAGCCCC...ACTGGCCACTCCTACATCCCCAGCTCCACACGGCCTGCACACCTGTGTTTCCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000581396.5
CDS-3UTR GCA 90 bp GTGGGAGGGGAGAGAGTCTCTGGCTGCAGTTGTCCCACCACTCAGAGAAAAGAAGGGCGGGGCCGGGCGTaGTCTTTCTCCATGGGCGGG +
Preference number: 4 (lower is better)
Translates to: VGGERVSGCSCPTTQRKEGRGRA*SFSMGG
Trigger: CCCGCCCATGGAGAAAGAGCACGCCCGGCCCCGCCC...TTCTTTTCTCTGAGTGGTGGGACAACTGCAGCCAGAGACTCTCTCCCCTCCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000478943.5
ENST00000581396.5
CDS-3UTR GCA 90 bp AGGGGAGAGAGTCTCTGGCTGCAGTTGTCCCACCACTCAGAGAAAAGAAGTGGCGGGCGGGGCCGGGCGTaGTCTTTCTCCATGGGCGGG +
Preference number: 4 (lower is better)
Translates to: RGESLWLQLSHHSEKRSGGRGRA*SFSMGG
Trigger: CCCGCCCATGGAGAAAGAGCACGCCCGGCCCCGCCC...GCCACTTCTTTTCTCTGAGTGGTGGGACAACTGCAGCCAGAGACTCTCTCCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000478943.5
ENST00000581396.5
CDS-3UTR GCA 90 bp GGTGCCAGGGGCCCAACTGCACATAGCGCCATTCTCTGCCGCCCAGTGGCCAAACCCAGGAGGGCAGAATaGCTGAGAAGGTCGCTGAGC +
Preference number: 4 (lower is better)
Translates to: GARGPTAHSAILCRPVAKPRRAE*LRRSLS
Trigger: GCTCAGCGACCTTCTCAGGCATTCTGCCCTCCTGGG...TTTGGCCACTGGGCGGCAGAGAATGGCGCTATGTGCAGTTGGGCCCCTGGCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR GCA 90 bp CTGGGCTGGCAGCTGAATGATGGAGAGAGGGTCAAGAAGGTGAGAGACCCCCACTGCAGGGACCCTCGGTaGCAGGCTCGGCTGCTGAGC +
Preference number: 4 (lower is better)
Translates to: LGWQLNDGERVKKVRDPHCRDPR*QARLLS
Trigger: GCTCAGCAGCCGAGCCTGGCACCGAGGGTCCCTGCA...GTGGGGGTCTCTCACCTTCTTGACCCTCTCTCCATCATTCAGCTGCCAGCCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000478943.5
ENST00000581396.5
CDS-3UTR GCA 90 bp ATGGAAACACAGGTGTGCAGGCCGTGTGGAGCTGGGGATGTAGGAGTGGCCAGTTGCAGGGACCCTCGGTaGCAGGCTCGGCTGCTGAGC +
Preference number: 4 (lower is better)
Translates to: METQVCRPCGAGDVGVASCRDPR*QARLLS
Trigger: GCTCAGCAGCCGAGCCTGGCACCGAGGGTCCCTGCA...ACTGGCCACTCCTACATCCCCAGCTCCACACGGCCTGCACACCTGTGTTTCCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000478943.5
ENST00000581396.5
CDS-3UTR GCA 90 bp CTCAGAGAAAAGAAGTGGCTGAAGCTGGTCCTGACTAGTGGGAGGCCTGGGAGCCCTGCCCAGGGAGCCTaGAGGGACCCTCGGTGCCAG +
Preference number: 4 (lower is better)
Translates to: LREKKWLKLVLTSGRPGSPAQGA*RDPRCQ
Trigger: CTGGCACCGAGGGTCCCTGCAGGCTCCCTGGGCAGG...GCTCCCAGGCCTCCCACTAGTCAGGACCAGCTTCAGCCACTTCTTTTCTCTGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000478943.5
ENST00000581396.5
CDS-3UTR GCA 90 bp AGCAGACACGGTGGCATTTCCATGGAAACACAGGTGTGCAGGCCGTGTGGAGCTCCTGCCCAGGGAGCCTaGAGGGACCCTCGGTGCCAG +
Preference number: 4 (lower is better)
Translates to: SRHGGISMETQVCRPCGAPAQGA*RDPRCQ
Trigger: CTGGCACCGAGGGTCCCTGCAGGCTCCCTGGGCAGG...AGCTCCACACGGCCTGCACACCTGTGTTTCCATGGAAATGCCACCGTGTCTGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000478943.5
ENST00000581396.5
CDS-3UTR GCA 90 bp AACACAGGTGTGCAGGCCGTGTGGAGCTGGGGATGTAGGAGTGGCCAGTGCCCGCATCTGCGGGCTGCCTaGTGCCCTCCCAATTGTCCT +
Preference number: 4 (lower is better)
Translates to: NTGVQAVWSWGCRSGQCPHLRAA*CPPNCP
Trigger: AGGACAATTGGGAGGGCAGCAGGCAGCCCGCAGATG...CGGGCACTGGCCACTCCTACATCCCCAGCTCCACACGGCCTGCACACCTGTGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000478943.5
ENST00000581396.5
CDS-3UTR GCA 90 bp GTGTGGAGCTGGGGATGTAGGAGTGGCCAGTGCCCGGTGTCCACGGGGTGCGAGAGTCGCCATCCTGAATaGTCCCCAACGACCATGTCG +
Preference number: 4 (lower is better)
Translates to: VWSWGCRSGQCPVSTGCESRHPE*SPTTMS
Trigger: CGACATGGTCGTTGGGGAGCATTCAGGATGGCGACT...CTCGCACCCCGTGGACACCGGGCACTGGCCACTCCTACATCCCCAGCTCCACAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR GCA 90 bp AGGCCGTGTGGAGCTGGGGATGTAGGAGTGGCCAGTGCCCGGTGTCCACGGGGTAGTCGCCATCCTGAATaGTCCCCAACGACCATGTCG +
Preference number: 4 (lower is better)
Translates to: RPCGAGDVGVASARCPRGSRHPE*SPTTMS
Trigger: CGACATGGTCGTTGGGGAGCATTCAGGATGGCGACT...ACCCCGTGGACACCGGGCACTGGCCACTCCTACATCCCCAGCTCCACACGGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR GCA 90 bp AGGCCTGGGAGCAGACACGGTGGCATTTCCATGGAAACACAGGTGTGCAGGCCGGCCATGTGGAGCCCTTaGCCCAACTCTCCGGGCTGG +
Preference number: 4 (lower is better)
Translates to: RPGSRHGGISMETQVCRPAMWSP*PNSPGW
Trigger: CCAGCCCGGAGAGTTGGGGCAAGGGCTCCACATGGC...CGGCCTGCACACCTGTGTTTCCATGGAAATGCCACCGTGTCTGCTCCCAGGCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR CCA 90 bp GGGGCCGGGCGTGCTCTTTCTCCATGGGCGGGTGGAGGAAAGACAGTCCGGGTGATTGGGACCTGGGCATaGTCGCAGCTGGATCCACTT +
Preference number: 4 (lower is better)
Translates to: GAGRALSPWAGGGKTVRVIGTWA*SQLDPL
Trigger: AAGTGGATCCAGCTGCGACCATGCCCAGGTCCCAAT...CACCCGGACTGTCTTTCCTCCACCCGCCCATGGAGAAAGAGCACGCCCGGCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000581396.5
CDS-3UTR CCA 90 bp GTGTGCAGGCCGTGTGGAGCTGGGGATGTAGGAGTGGCCAGTGCCCGGTGTCCATGTGTTCCCCACCATTaGGCTCACCACGGCTGGAGA +
Preference number: 4 (lower is better)
Translates to: VCRPCGAGDVGVASARCPCVPHH*AHHGWR
Trigger: TCTCCAGCCGTGGTGAGCCCAATGGTGGGGAACACA...TGGACACCGGGCACTGGCCACTCCTACATCCCCAGCTCCACACGGCCTGCACAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000535933.5
ENST00000540946.5
ENST00000581396.5
CDS-3UTR CCA 90 bp GTGCAGGCCGTGTGGAGCTGGGGATGTAGGAGTGGCCAGTGCCCGGTGTCCACGTCTAAGCCTGCAAGCTaGGAGGAGAGGGAAGATGGG +
Preference number: 4 (lower is better)
Translates to: VQAVWSWGCRSGQCPVSTSKPAS*EEREDG
Trigger: CCCATCTTCCCTCTCCTCCCAGCTTGCAGGCTTAGA...CGTGGACACCGGGCACTGGCCACTCCTACATCCCCAGCTCCACACGGCCTGCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000535933.5
ENST00000540946.5
ENST00000581396.5
CDS-3UTR CCA 90 bp CATGGAAACACAGGTGTGCAGGCCGTGTGGAGCTGGGGATGTAGGAGTGGCCAGGGCTGGACCAGGGCCTaGGATGACCCGAGTCCCTTG +
Preference number: 4 (lower is better)
Translates to: HGNTGVQAVWSWGCRSGQGWTRA*DDPSPL
Trigger: CAAGGGACTCGGGTCATCCCAGGCCCTGGTCCAGCC...CTGGCCACTCCTACATCCCCAGCTCCACACGGCCTGCACACCTGTGTTTCCATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR CCA 90 bp CCTGGGAGCAGACACGGTGGCATTTCCATGGAAACACAGGTGTGCAGGCCGTGTGTGGGGCCAGGTGTCTaGCTGGACCAGGGCCTGGGA +
Preference number: 4 (lower is better)
Translates to: PGSRHGGISMETQVCRPCVGPGV*LDQGLG
Trigger: TCCCAGGCCCTGGTCCAGCCAGACACCTGGCCCCAC...ACACGGCCTGCACACCTGTGTTTCCATGGAAATGCCACCGTGTCTGCTCCCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR CCA 90 bp CCCAGGAGGGCAGAATGCCTGAGAAGGTCGCTGAGCCAGGCAGAGGTGAGCACACTTTCCCTGCTTGGCTaGTGGTCTGGGCCGTCCTGC +
Preference number: 4 (lower is better)
Translates to: PRRAECLRRSLSQAEVSTLSLLG*WSGPSC
Trigger: GCAGGACGGCCCAGACCACCAGCCAAGCAGGGAAAG...TGTGCTCACCTCTGCCTGGCTCAGCGACCTTCTCAGGCATTCTGCCCTCCTGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR CCA 90 bp CTGAATGCTCCCCAACGACCATGTCGCTGGTCTCTTCTCCCGTCAAGCCCAGCCCCTGGCACAGGGTCCTaGGTCGGGCAGCACTTGCTC +
Preference number: 4 (lower is better)
Translates to: LNAPQRPCRWSLLPSSPAPGTGS*VGQHLL
Trigger: GAGCAAGTGCTGCCCGACCCAGGACCCTGTGCCAGG...GGCTGGGCTTGACGGGAGAAGAGACCAGCGACATGGTCGTTGGGGAGCATTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR CCA 90 bp CTGGGCTGGCAGCTGAATGATGGAGAGAGGGTCAAGAAGGTGAGAGACCCCCACGGAGGGCTGCTAGCCTaGCACAGGGTCCTGGGTCGG +
Preference number: 4 (lower is better)
Translates to: LGWQLNDGERVKKVRDPHGGLLA*HRVLGR
Trigger: CCGACCCAGGACCCTGTGCCAGGCTAGCAGCCCTCC...GTGGGGGTCTCTCACCTTCTTGACCCTCTCTCCATCATTCAGCTGCCAGCCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR CCA 90 bp CATGGATCAGGAACCTGTGCTGACCTAGGCAGTGCATGCTGGAGGGGACAGGAGAAGGGCTGGGGCCTCTaGGTGCACCTGGGCCATCCC +
Preference number: 4 (lower is better)
Translates to: HGSGTCADLGSACWRGQEKGWGL*VHLGHP
Trigger: GGGATGGCCCAGGTGCACCCAGAGGCCCCAGCCCTT...CTCCTGTCCCCTCCAGCATGCACTGCCTAGGTCAGCACAGGTTCCTGATCCATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR CCA 90 bp GGCATTTCCATGGAAACACAGGTGTGCAGGCCGTGTGGAGCTGGGGATGTAGGAGCAACCAGCTGGCGCTaGCGCTGGAGCTGGAGCGGG +
Preference number: 4 (lower is better)
Translates to: GISMETQVCRPCGAGDVGATSWR*RWSWSG
Trigger: CCCGCTCCAGCTCCAGCGCCAGCGCCAGCTGGTTGC...TCCTACATCCCCAGCTCCACACGGCCTGCACACCTGTGTTTCCATGGAAATGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR CCA 90 bp CCTGGGAGCAGACACGGTGGCATTTCCATGGAAACACAGGTGTGCAGGCCGTGTCTCCTCCCCAGGGGCTaGAGTGACAGCACAGGCCCC +
Preference number: 4 (lower is better)
Translates to: PGSRHGGISMETQVCRPCLLPRG*SDSTGP
Trigger: GGGGCCTGTGCTGTCACTCCAGCCCCTGGGGAGGAG...ACACGGCCTGCACACCTGTGTTTCCATGGAAATGCCACCGTGTCTGCTCCCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR CCA 90 bp CATGGAAACACAGGTGTGCAGGCCGTGTGGAGCTGGGGATGTAGGAGTGGCCAGGCTGGTGACGGGCACTaGGGGAGGCGAGCACTTCAG +
Preference number: 4 (lower is better)
Translates to: HGNTGVQAVWSWGCRSGQAGDGH*GRRALQ
Trigger: CTGAAGTGCTCGCCTCCCCCAGTGCCCGTCACCAGC...CTGGCCACTCCTACATCCCCAGCTCCACACGGCCTGCACACCTGTGTTTCCATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR CCA 90 bp CAGAGCAATACCTCCAGTGCAAGTCCCTCCACAAGCCAGGACCAGGTGTGCGGGGCTGCTCCCTATGGCTaGTGGCCGCAGGGGAAGCCT +
Preference number: 4 (lower is better)
Translates to: QSNTSSASPSTSQDQVCGAAPYG*WPQGKP
Trigger: AGGCTTCCCCTGCGGCCACCAGCCATAGGGAGCAGC...CCCGCACACCTGGTCCTGGCTTGTGGAGGGACTTGCACTGGAGGTATTGCTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR TCA 90 bp GTGTGCAGGCCGTGTGGAGCTGGGGATGTAGGAGTGGCCAGTGCCCGGTGTCCAACTTGTCCTCTGCTGTaGTTGGGACCTGGGCATGGT +
Preference number: 4 (lower is better)
Translates to: VCRPCGAGDVGVASARCPTCPLL*LGPGHG
Trigger: ACCATGCCCAGGTCCCAATCACAGCAGAGGACAAGT...TGGACACCGGGCACTGGCCACTCCTACATCCCCAGCTCCACACGGCCTGCACAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000581396.5
CDS-3UTR TCA 90 bp CATGGAAACACAGGTGTGCAGGCCGTGTGGAGCTGGGGATGTAGGAGTGGCCAGTGGACACGCGGGAGATaGGCTCCACGATGCGCTGCT +
Preference number: 4 (lower is better)
Translates to: HGNTGVQAVWSWGCRSGQWTRGR*APRCAA
Trigger: AGCAGCGCATCGTGGAGCTCATCTCCCGCGTGTCCA...CTGGCCACTCCTACATCCCCAGCTCCACACGGCCTGCACACCTGTGTTTCCATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000535933.5
ENST00000540946.5
ENST00000581396.5
CDS-3UTR TCA 90 bp CATGGAAACACAGGTGTGCAGGCCGTGTGGAGCTGGGGATGTAGGAGTGGCCAGGCAGCAGCTCCTCGGTaGCCTCCTCATTGGACACGC +
Preference number: 4 (lower is better)
Translates to: HGNTGVQAVWSWGCRSGQAAAPR*PPHWTR
Trigger: GCGTGTCCAATGAGGAGGTCACCGAGGAGCTGCTGC...CTGGCCACTCCTACATCCCCAGCTCCACACGGCCTGCACACCTGTGTTTCCATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000535933.5
ENST00000540946.5
ENST00000581396.5
CDS-3UTR TCA 90 bp CTGAATGCTCCCCAACGACCATGTCGCTGGTCTCTTCTCCCGTCAAGCCCAGCCGTGAGACCAGGCCCATaGGTGCAGCACACCCTGCTC +
Preference number: 4 (lower is better)
Translates to: LNAPQRPCRWSLLPSSPAVRPGP*VQHTLL
Trigger: GAGCAGGGTGTGCTGCACTCATGGGCCTGGTCTCAC...GGCTGGGCTTGACGGGAGAAGAGACCAGCGACATGGTCGTTGGGGAGCATTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR TCA 90 bp TGGGAGCAGACACGGTGGCATTTCCATGGAAACACAGGTGTGCAGGCCGTGTGGGCCAGGCTCGGCTGCTaGGCCAGCTTGGGTGTGAAG +
Preference number: 4 (lower is better)
Translates to: WEQTRWHFHGNTGVQAVWARLGC*ASLGVK
Trigger: CTTCACACCCAAGCTGGCTCAGCAGCCGAGCCTGGC...CCACACGGCCTGCACACCTGTGTTTCCATGGAAATGCCACCGTGTCTGCTCCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000478943.5
ENST00000581396.5
CDS-3UTR TCA 90 bp GGCCTGGGAGCAGACACGGTGGCATTTCCATGGAAACACAGGTGTGCAGGCCGTCTTGAGGCAGATGTGTaGGGCTACGGCAGGCCAGGC +
Preference number: 4 (lower is better)
Translates to: GLGADTVAFPWKHRCAGRLEADV*GYGRPG
Trigger: GCCTGGCCTGCCGTAGCCTCACACATCTGCCTCAAG...ACGGCCTGCACACCTGTGTTTCCATGGAAATGCCACCGTGTCTGCTCCCAGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR TCA 90 bp CCGCCCACCACCCGCAGGCCCAGCTCTGGCAGGGCCTCAGAGACAACCCAAGTCGTCTTTGAGAAACATTaGGGAGGCAGGGGCTCATCA +
Preference number: 4 (lower is better)
Translates to: PPTTRRPSSGRASETTQVVFEKH*GGRGSS
Trigger: TGATGAGCCCCTGCCTCCTCAATGTTTCTCAAAGAC...GACTTGGGTTGTCTCTGAGGCCCTGCCAGAGCTGGGCCTGCGGGTGGTGGGCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR TCA 90 bp GAGGTGCAAGCAGGCCACCTGAGGGGTGGCTCCAGGCTAGGAAGGCAGGTGACAGAGCCTCCAGGCTCCTaGCTTTTTGGGACTCCTGGT +
Preference number: 4 (lower is better)
Translates to: EVQAGHLRGGSRLGRQVTEPPGS*LFGTPG
Trigger: ACCAGGAGTCCCAAAAAGTCAGGAGCCTGGAGGCTC...TGTCACCTGCCTTCCTAGCCTGGAGCCACCCCTCAGGTGGCCTGCTTGCACCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR TCA 90 bp GGCCTGGGAGCAGACACGGTGGCATTTCCATGGAAACACAGGTGTGCAGGCCGTGCCAGGCCTCTCCAATaGTGCCTGGCAACCAGCTGG +
Preference number: 4 (lower is better)
Translates to: GLGADTVAFPWKHRCAGRARPLQ*CLATSW
Trigger: CCAGCTGGTTGCCAGGCATCATTGGAGAGGCCTGGC...ACGGCCTGCACACCTGTGTTTCCATGGAAATGCCACCGTGTCTGCTCCCAGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR TCA 90 bp ACAGGTGTGCAGGCCGTGTGGAGCTGGGGATGTAGGAGTGGCCAGTGCCCGGTGCCAGCAACAACCCCTTaGGGCTCCAAAGCTCCTTGT +
Preference number: 4 (lower is better)
Translates to: TGVQAVWSWGCRSGQCPVPATTP*GSKAPC
Trigger: ACAAGGAGCTTTGGAGCCTCAAGGGGTTGTTGCTGG...CACCGGGCACTGGCCACTCCTACATCCCCAGCTCCACACGGCCTGCACACCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR TCA 90 bp AACACAGGTGTGCAGGCCGTGTGGAGCTGGGGATGTAGGAGTGGCCAGTGCCCGGAGCACTTCAGGGGCTaGCAGACAATGTCTCTGGGG +
Preference number: 4 (lower is better)
Translates to: NTGVQAVWSWGCRSGQCPEHFRG*QTMSLG
Trigger: CCCCAGAGACATTGTCTGTCAGCCCCTGAAGTGCTC...CGGGCACTGGCCACTCCTACATCCCCAGCTCCACACGGCCTGCACACCTGTGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR TCA 90 bp CTGAATGCTCCCCAACGACCATGTCGCTGGTCTCTTCTCCCGTCAAGCCCAGCCGGTGGATGGATGCTCTaGGCCTCGGGTGCACTGACC +
Preference number: 4 (lower is better)
Translates to: LNAPQRPCRWSLLPSSPAGGWML*ASGALT
Trigger: GGTCAGTGCACCCGAGGCTCAGAGCATCCATCCACC...GGCTGGGCTTGACGGGAGAAGAGACCAGCGACATGGTCGTTGGGGAGCATTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR GCA 90 bp GTGCAGGCCGTGTGGAGCTGGGGATGTAGGAGTGGCCAGTGCCCGGTGTCCACGGTTACCGTCTTGCGCTaGTCAGCCAAGGAGTTTCCT +
Preference number: 4 (lower is better)
Translates to: VQAVWSWGCRSGQCPVSTVTVLR*SAKEFP
Trigger: AGGAAACTCCTTGGCTGAGCAGCGCAAGACGGTAAC...CGTGGACACCGGGCACTGGCCACTCCTACATCCCCAGCTCCACACGGCCTGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000535933.5
ENST00000540946.5
ENST00000581396.5
CDS-3UTR GCA 90 bp GAAACACAGGTGTGCAGGCCGTGTGGAGCTGGGGATGTAGGAGTGGCCAGTGCCGGCAAACCACAGAGCTaGTCACAGGGCGAAGAGGGC +
Preference number: 4 (lower is better)
Translates to: ETQVCRPCGAGDVGVASAGKPQS*SQGEEG
Trigger: GCCCTCTTCGCCCTGTGAGCAGCTCTGTGGTTTGCC...GGCACTGGCCACTCCTACATCCCCAGCTCCACACGGCCTGCACACCTGTGTTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000535933.5
ENST00000540946.5
ENST00000581396.5
CDS-3UTR GCA 90 bp CTGGGAGCAGACACGGTGGCATTTCCATGGAAACACAGGTGTGCAGGCCGTGTGTGTAGGAGTGGCCAGTaGCCGGTGTCCACGGGGTGC +
Preference number: 4 (lower is better)
Translates to: LGADTVAFPWKHRCAGRVCRSGQ*PVSTGC
Trigger: GCACCCCGTGGACACCGGGCACTGGCCACTCCTACA...CACACGGCCTGCACACCTGTGTTTCCATGGAAATGCCACCGTGTCTGCTCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000535933.5
ENST00000540946.5
ENST00000581396.5
CDS-3UTR GCA 90 bp ATGGAAACACAGGTGTGCAGGCCGTGTGGAGCTGGGGATGTAGGAGTGGCCAGTTGTAGGAGTGGCCAGTaGCCGGTGTCCACGGGGTGC +
Preference number: 4 (lower is better)
Translates to: METQVCRPCGAGDVGVASCRSGQ*PVSTGC
Trigger: GCACCCCGTGGACACCGGGCACTGGCCACTCCTACA...ACTGGCCACTCCTACATCCCCAGCTCCACACGGCCTGCACACCTGTGTTTCCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000535933.5
ENST00000540946.5
ENST00000581396.5
CDS-3UTR GCA 90 bp AGCAGACACGGTGGCATTTCCATGGAAACACAGGTGTGCAGGCCGTGTGGAGCTGGGGCTGGGCCACTCTaGCCGCTCTTCCTGGGAGGA +
Preference number: 4 (lower is better)
Translates to: SRHGGISMETQVCRPCGAGAGPL*PLFLGG
Trigger: TCCTCCCAGGAAGAGCGGGCAGAGTGGCCCAGCCCC...AGCTCCACACGGCCTGCACACCTGTGTTTCCATGGAAATGCCACCGTGTCTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000581396.5
CDS-3UTR GCA 90 bp GGTGGCATTTCCATGGAAACACAGGTGTGCAGGCCGTGTGGAGCTGGGGATGTAGGGGCTGGGCCACTCTaGCCGCTCTTCCTGGGAGGA +
Preference number: 4 (lower is better)
Translates to: GGISMETQVCRPCGAGDVGAGPL*PLFLGG
Trigger: TCCTCCCAGGAAGAGCGGGCAGAGTGGCCCAGCCCC...TACATCCCCAGCTCCACACGGCCTGCACACCTGTGTTTCCATGGAAATGCCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000581396.5
CDS-3UTR GCA 90 bp ACAGGTGTGCAGGCCGTGTGGAGCTGGGGATGTAGGAGTGGCCAGTGCCCGGTGCTGCTCTTCCAGAGATaGCACAAAGCCCCTTCAGGG +
Preference number: 4 (lower is better)
Translates to: TGVQAVWSWGCRSGQCPVLLFQR*HKAPSG
Trigger: CCCTGAAGGGGCTTTGTGGCATCTCTGGAAGAGCAG...CACCGGGCACTGGCCACTCCTACATCCCCAGCTCCACACGGCCTGCACACCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000478943.5
ENST00000581396.5
CDS-3UTR GCA 90 bp GGCCTGGGAGCAGACACGGTGGCATTTCCATGGAAACACAGGTGTGCAGGCCGTCTGCGGGCTGCCTGCTaGCCTCCCAATTGTCCTTGG +
Preference number: 4 (lower is better)
Translates to: GLGADTVAFPWKHRCAGRLRAAC*PPNCPW
Trigger: CCAAGGACAATTGGGAGGGCAGCAGGCAGCCCGCAG...ACGGCCTGCACACCTGTGTTTCCATGGAAATGCCACCGTGTCTGCTCCCAGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000478943.5
ENST00000581396.5
CDS-3UTR GCA 90 bp TGCAGGCCGTGTGGAGCTGGGGATGTAGGAGTGGCCAGTGCCCGGTGTCCACGGCAGAGCGTCCAAGTCTaGCATGGGAAATTCAACCCC +
Preference number: 4 (lower is better)
Translates to: CRPCGAGDVGVASARCPRQSVQV*HGKFNP
Trigger: GGGGTTGAATTTCCCATGGCAGACTTGGACGCTCTG...CCGTGGACACCGGGCACTGGCCACTCCTACATCCCCAGCTCCACACGGCCTGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379504.8
ENST00000535933.5
ENST00000581396.5
CDS-3UTR GCA 90 bp CAGAGCAATACCTCCAGTGCAAGTCCCTCCACAAGCCAGGACCAGGTGTGCGGGTGGTCTGGGCCGTCCTaGCAGGTGGGAAGGGCTAAC +
Preference number: 4 (lower is better)
Translates to: QSNTSSASPSTSQDQVCGWSGPS*QVGRAN
Trigger: GTTAGCCCTTCCCACCTGGCAGGACGGCCCAGACCA...CCCGCACACCTGGTCCTGGCTTGTGGAGGGACTTGCACTGGAGGTATTGCTCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR GCA 90 bp GTGTGCAGGCCGTGTGGAGCTGGGGATGTAGGAGTGGCCAGTGCCCGGTGTCCACACCGGGGCTATACTTaGTTCCTGTGCAGGCCTCAA +
Preference number: 4 (lower is better)
Translates to: VCRPCGAGDVGVASARCPHRGYT*FLCRPQ
Trigger: TTGAGGCCTGCACAGGAAGCAAGTATAGCCCCGGTG...TGGACACCGGGCACTGGCCACTCCTACATCCCCAGCTCCACACGGCCTGCACAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR GCA 90 bp GAGGTGCAAGCAGGCCACCTGAGGGGTGGCTCCAGGCTAGGAAGGCAGGTGACAAGGCTGAAGCCAGGCTaGAAGCAAGTGCTCCTCCAC +
Preference number: 4 (lower is better)
Translates to: EVQAGHLRGGSRLGRQVTRLKPG*KQVLLH
Trigger: GTGGAGGAGCACTTGCTTGCAGCCTGGCTTCAGCCT...TGTCACCTGCCTTCCTAGCCTGGAGCCACCCCTCAGGTGGCCTGCTTGCACCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR GCA 90 bp ATGGAAACACAGGTGTGCAGGCCGTGTGGAGCTGGGGATGTAGGAGTGGCCAGTTCGGGGGCTGATGGCTaGTCCCTATGGCTGGTGGCC +
Preference number: 4 (lower is better)
Translates to: METQVCRPCGAGDVGVASSGADG*SLWLVA
Trigger: GGCCACCAGCCATAGGGAGCAGCCATCAGCCCCCGA...ACTGGCCACTCCTACATCCCCAGCTCCACACGGCCTGCACACCTGTGTTTCCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR GCA 90 bp GGCCTGGGAGCAGACACGGTGGCATTTCCATGGAAACACAGGTGTGCAGGCCGTCTGGGCCTTGGGGCCTaGCAGACGTGGTCTGGATTG +
Preference number: 4 (lower is better)
Translates to: GLGADTVAFPWKHRCAGRLGLGA*QTWSGL
Trigger: CAATCCAGACCACGTCTGGCAGGCCCCAAGGCCCAG...ACGGCCTGCACACCTGTGTTTCCATGGAAATGCCACCGTGTCTGCTCCCAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478943.5
CDS-3UTR CCA 90 bp AGGCCGTGTGGAGCTGGGGATGTAGGAGTGGCCAGTGCCCGGTGTCCACGGGGTTCTTCAGGGCTCGAATaGCATCCTTTGGCCCTTCCT +
Preference number: 4 (lower is better)
Translates to: RPCGAGDVGVASARCPRGSSGLE*HPLALP
Trigger: AGGAAGGGCCAAAGGATGCCATTCGAGCCCTGAAGA...ACCCCGTGGACACCGGGCACTGGCCACTCCTACATCCCCAGCTCCACACGGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000535933.5
ENST00000540946.5
ENST00000581396.5
CDS-3UTR CCA 90 bp GGTGCCAGGGGCCCAACTGCACATAGCGCCATTCTCTGCCGCCCAGTGGCCAAAGTCCTCTGCTGTGATTaGGACCTGGGCATGGTCGCA +
Preference number: 4 (lower is better)
Translates to: GARGPTAHSAILCRPVAKVLCCD*DLGMVA
Trigger: TGCGACCATGCCCAGGTCCCAATCACAGCAGAGGAC...TTTGGCCACTGGGCGGCAGAGAATGGCGCTATGTGCAGTTGGGCCCCTGGCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR CCA 90 bp CATGGAAACACAGGTGTGCAGGCCGTGTGGAGCTGGGGATGTAGGAGTGGCCAGGGAGGAGAGGGAAGATaGGGGCGCTGTGTTCCCCAC +
Preference number: 4 (lower is better)
Translates to: HGNTGVQAVWSWGCRSGQGGEGR*GRCVPH
Trigger: GTGGGGAACACAGCGCCCCCATCTTCCCTCTCCTCC...CTGGCCACTCCTACATCCCCAGCTCCACACGGCCTGCACACCTGTGTTTCCATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000535933.5
ENST00000540946.5
ENST00000581396.5
CDS-3UTR CCA 90 bp CAGAGCAATACCTCCAGTGCAAGTCCCTCCACAAGCCAGGACCAGGTGTGCGGGGGAGGAGAGGGAAGATaGGGGCGCTGTGTTCCCCAC +
Preference number: 4 (lower is better)
Translates to: QSNTSSASPSTSQDQVCGGGEGR*GRCVPH
Trigger: GTGGGGAACACAGCGCCCCCATCTTCCCTCTCCTCC...CCCGCACACCTGGTCCTGGCTTGTGGAGGGACTTGCACTGGAGGTATTGCTCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR CCA 90 bp ACAGGTGTGCAGGCCGTGTGGAGCTGGGGATGTAGGAGTGGCCAGTGCCCGGTGTCTAAGCCTGCAAGCTaGGAGGAGAGGGAAGATGGG +
Preference number: 4 (lower is better)
Translates to: TGVQAVWSWGCRSGQCPVSKPAS*EEREDG
Trigger: CCCATCTTCCCTCTCCTCCCAGCTTGCAGGCTTAGA...CACCGGGCACTGGCCACTCCTACATCCCCAGCTCCACACGGCCTGCACACCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000535933.5
ENST00000540946.5
ENST00000581396.5
CDS-3UTR CCA 90 bp GTGTGGAGCTGGGGATGTAGGAGTGGCCAGTGCCCGGTGTCCACGGGGTGCGAGCGGGGATTACATTGCTaGAGTGAACTGAGGGTGCCA +
Preference number: 4 (lower is better)
Translates to: VWSWGCRSGQCPVSTGCERGLHC*SELRVP
Trigger: TGGCACCCTCAGTTCACTCCAGCAATGTAATCCCCG...CTCGCACCCCGTGGACACCGGGCACTGGCCACTCCTACATCCCCAGCTCCACAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000535933.5
ENST00000540946.5
ENST00000581396.5
CDS-3UTR CCA 90 bp GAAACACAGGTGTGCAGGCCGTGTGGAGCTGGGGATGTAGGAGTGGCCAGTGCCGGTGTGCAGGCCGTGTaGAGCTGGGGATGTAGGAGT +
Preference number: 4 (lower is better)
Translates to: ETQVCRPCGAGDVGVASAGVQAV*SWGCRS
Trigger: ACTCCTACATCCCCAGCTCCACACGGCCTGCACACC...GGCACTGGCCACTCCTACATCCCCAGCTCCACACGGCCTGCACACCTGTGTTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000535933.5
ENST00000540946.5
ENST00000581396.5
CDS-3UTR CCA 90 bp CATGGATCAGGAACCTGTGCTGACCTAGGCAGTGCATGCTGGAGGGGACAGGAGTCAGGAAGCACTGCCTaGGGCTGGGCCACTCTGCCC +
Preference number: 4 (lower is better)
Translates to: HGSGTCADLGSACWRGQESGSTA*GWATLP
Trigger: GGGCAGAGTGGCCCAGCCCCAGGCAGTGCTTCCTGA...CTCCTGTCCCCTCCAGCATGCACTGCCTAGGTCAGCACAGGTTCCTGATCCATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR CCA 90 bp CCTGGGAGCAGACACGGTGGCATTTCCATGGAAACACAGGTGTGCAGGCCGTGTTCAGGAAGCACTGCCTaGGGCTGGGCCACTCTGCCC +
Preference number: 4 (lower is better)
Translates to: PGSRHGGISMETQVCRPCSGSTA*GWATLP
Trigger: GGGCAGAGTGGCCCAGCCCCAGGCAGTGCTTCCTGA...ACACGGCCTGCACACCTGTGTTTCCATGGAAATGCCACCGTGTCTGCTCCCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000478943.5
ENST00000581396.5
CDS-3UTR CCA 90 bp ACAGGTGTGCAGGCCGTGTGGAGCTGGGGATGTAGGAGTGGCCAGTGCCCGGTGCGTGCTCTTTCTCCATaGGCGGGTGGAGGAAAGACA +
Preference number: 4 (lower is better)
Translates to: TGVQAVWSWGCRSGQCPVRALSP*AGGGKT
Trigger: TGTCTTTCCTCCACCCGCCCATGGAGAAAGAGCACG...CACCGGGCACTGGCCACTCCTACATCCCCAGCTCCACACGGCCTGCACACCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000478943.5
ENST00000581396.5
CDS-3UTR CCA 90 bp GTGTGCAGGCCGTGTGGAGCTGGGGATGTAGGAGTGGCCAGTGCCCGGTGTCCAAGGCCTCTCAGTCACTaGGAACCTCCAAGGATGCCA +
Preference number: 4 (lower is better)
Translates to: VCRPCGAGDVGVASARCPRPLSH*EPPRMP
Trigger: TGGCATCCTTGGAGGTTCCCAGTGACTGAGAGGCCT...TGGACACCGGGCACTGGCCACTCCTACATCCCCAGCTCCACACGGCCTGCACAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR CCA 90 bp ATGAGTGCAGCACACCCTGCTCTTCCAGAGATGCCACAAAGCCCCTTCAGGGAGGTGGGGCCAGGTGTCTaGCTGGACCAGGGCCTGGGA +
Preference number: 4 (lower is better)
Translates to: MSAAHPALPEMPQSPFREVGPGV*LDQGLG
Trigger: TCCCAGGCCCTGGTCCAGCCAGACACCTGGCCCCAC...CTCCCTGAAGGGGCTTTGTGGCATCTCTGGAAGAGCAGGGTGTGCTGCACTCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR CCA 90 bp CTGGGCTGGCAGCTGAATGATGGAGAGAGGGTCAAGAAGGTGAGAGACCCCCACCCCCCTTTCCCTGCTTaGCTGGTGGTCTGGGCCGTC +
Preference number: 4 (lower is better)
Translates to: LGWQLNDGERVKKVRDPHPPFPA*LVVWAV
Trigger: GACGGCCCAGACCACCAGCCAAGCAGGGAAAGGGGG...GTGGGGGTCTCTCACCTTCTTGACCCTCTCTCCATCATTCAGCTGCCAGCCCAG
62% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR CCA 90 bp CATGGATCAGGAACCTGTGCTGACCTAGGCAGTGCATGCTGGAGGGGACAGGAGCCCCCTTTCCCTGCTTaGCTGGTGGTCTGGGCCGTC +
Preference number: 4 (lower is better)
Translates to: HGSGTCADLGSACWRGQEPPFPA*LVVWAV
Trigger: GACGGCCCAGACCACCAGCCAAGCAGGGAAAGGGGG...CTCCTGTCCCCTCCAGCATGCACTGCCTAGGTCAGCACAGGTTCCTGATCCATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR CCA 90 bp CCTGGCACAGGGTCCTGGGTCGGGCAGCACTTGCTCTTCACTGGAATAGTTCCTCCGCAGGCCCAGCTCTaGCAGGGCCTCAGAGACAAC +
Preference number: 4 (lower is better)
Translates to: PGTGSWVGQHLLFTGIVPPQAQL*QGLRDN
Trigger: GTTGTCTCTGAGGCCCTGCCAGAGCTGGGCCTGCGG...AGGAACTATTCCAGTGAAGAGCAAGTGCTGCCCGACCCAGGACCCTGTGCCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR CCA 90 bp ACAAGTCCAAGGAGTGAGACCAGGCCCATGAGTGCAGCACACCCTGCTCTTCCACGCTGGCGCTGGAGCTaGAGCGGGGCAGTTCTGGGA +
Preference number: 4 (lower is better)
Translates to: TSPRSETRPMSAAHPALPRWRWS*SGAVLG
Trigger: TCCCAGAACTGCCCCGCTCCAGCTCCAGCGCCAGCG...TGGAAGAGCAGGGTGTGCTGCACTCATGGGCCTGGTCTCACTCCTTGGACTTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR CCA 90 bp GTAACCCAAGTGGGTGAGACGTCCCCAAAGCCGACAGTGCAGAAGCTCCCAGGGAGGCCACCTGAGGGGTaGCTCCAGGCTAGGAAGGCA +
Preference number: 4 (lower is better)
Translates to: VTQVGETSPKPTVQKLPGRPPEG*LQARKA
Trigger: TGCCTTCCTAGCCTGGAGCCACCCCTCAGGTGGCCT...CCCTGGGAGCTTCTGCACTGTCGGCTTTGGGGACGTCTCACCCACTTGGGTTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR CCA 90 bp AGAGGGTATCTGGAAGGAGGGCCAGTGGGGTGGATGGATGCTCTGAGCCTCGGGGGCATGGTGGGGTGGTaGGGGAAGGCTAGTGAACCA +
Preference number: 4 (lower is better)
Translates to: RGYLEGGPVGWMDALSLGGMVGW*GKASEP
Trigger: TGGTTCACTAGCCTTCCCCCACCACCCCACCATGCC...CCCGAGGCTCAGAGCATCCATCCACCCCACTGGCCCTCCTTCCAGATACCCTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR CCA 90 bp AGAGGGTATCTGGAAGGAGGGCCAGTGGGGTGGATGGATGCTCTGAGCCTCGGGGGTGGCATGGTGGGGTaGTGGGGGAAGGCTAGTGAA +
Preference number: 4 (lower is better)
Translates to: RGYLEGGPVGWMDALSLGGGMVG*WGKASE
Trigger: TTCACTAGCCTTCCCCCACCACCCCACCATGCCACC...CCCGAGGCTCAGAGCATCCATCCACCCCACTGGCCCTCCTTCCAGATACCCTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR CCA 90 bp ATGGAAACACAGGTGTGCAGGCCGTGTGGAGCTGGGGATGTAGGAGTGGCCAGTCCCAAGACCACCAGGTaGCATGGTGGGGTGGTGGGG +
Preference number: 4 (lower is better)
Translates to: METQVCRPCGAGDVGVASPKTTR*HGGVVG
Trigger: CCCCACCACCCCACCATGCCACCTGGTGGTCTTGGG...ACTGGCCACTCCTACATCCCCAGCTCCACACGGCCTGCACACCTGTGTTTCCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR CCA 90 bp GAAAAGAAGTGGCTGAAGCTGGTCCTGACTAGTGGGAGGCCTGGGAGCAGACACCTCCTCCCCAGGGGCTaGAGTGACAGCACAGGCCCC +
Preference number: 4 (lower is better)
Translates to: EKKWLKLVLTSGRPGSRHLLPRG*SDSTGP
Trigger: GGGGCCTGTGCTGTCACTCCAGCCCCTGGGGAGGAG...GTGTCTGCTCCCAGGCCTCCCACTAGTCAGGACCAGCTTCAGCCACTTCTTTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR CCA 90 bp GAAAAGAAGTGGCTGAAGCTGGTCCTGACTAGTGGGAGGCCTGGGAGCAGACACCCCAACTCTCCGGGCTaGGTCCTCTCCTCCCCAGGG +
Preference number: 4 (lower is better)
Translates to: EKKWLKLVLTSGRPGSRHPNSPG*VLSSPG
Trigger: CCCTGGGGAGGAGAGGACCCAGCCCGGAGAGTTGGG...GTGTCTGCTCCCAGGCCTCCCACTAGTCAGGACCAGCTTCAGCCACTTCTTTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR CCA 90 bp CATGGATCAGGAACCTGTGCTGACCTAGGCAGTGCATGCTGGAGGGGACAGGAGCCCCAGGTGGGCCCATaGCCTACCCCAAGCCATCCA +
Preference number: 4 (lower is better)
Translates to: HGSGTCADLGSACWRGQEPQVGP*PTPSHP
Trigger: TGGATGGCTTGGGGTAGGCCATGGGCCCACCTGGGG...CTCCTGTCCCCTCCAGCATGCACTGCCTAGGTCAGCACAGGTTCCTGATCCATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR CCA 90 bp GTGTGCAGGCCGTGTGGAGCTGGGGATGTAGGAGTGGCCAGTGCCCGGTGTCCAAGGGGAAGCCTGACTTaGACCCCACAGATAGGAAGG +
Preference number: 4 (lower is better)
Translates to: VCRPCGAGDVGVASARCPRGSLT*TPQIGR
Trigger: CCTTCCTATCTGTGGGGTCCAAGTCAGGCTTCCCCT...TGGACACCGGGCACTGGCCACTCCTACATCCCCAGCTCCACACGGCCTGCACAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR CCA 90 bp ATGGAAACACAGGTGTGCAGGCCGTGTGGAGCTGGGGATGTAGGAGTGGCCAGTGCTGCTCCCTATGGCTaGTGGCCGCAGGGGAAGCCT +
Preference number: 4 (lower is better)
Translates to: METQVCRPCGAGDVGVASAAPYG*WPQGKP
Trigger: AGGCTTCCCCTGCGGCCACCAGCCATAGGGAGCAGC...ACTGGCCACTCCTACATCCCCAGCTCCACACGGCCTGCACACCTGTGTTTCCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR TCA 90 bp AGGGCGGGGCCGGGCGTGCTCTTTCTCCATGGGCGGGTGGAGGAAAGACAGTCCCCAGAACACTGTCGATaGAATCTCGGTTGGCCACAA +
Preference number: 4 (lower is better)
Translates to: RAGPGVLFLHGRVEERQSPEHCR*NLGWPQ
Trigger: TTGTGGCCAACCGAGATTTCATCGACAGTGTTCTGG...GGACTGTCTTTCCTCCACCCGCCCATGGAGAAAGAGCACGCCCGGCCCCGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318094.14
ENST00000379504.8
CDS-3UTR TCA 90 bp GTGTGGAGCTGGGGATGTAGGAGTGGCCAGTGCCCGGTGTCCACGGGGTGCGAGCCAGAACACTGTCGATaGAATCTCGGTTGGCCACAA +
Preference number: 4 (lower is better)
Translates to: VWSWGCRSGQCPVSTGCEPEHCR*NLGWPQ
Trigger: TTGTGGCCAACCGAGATTTCATCGACAGTGTTCTGG...CTCGCACCCCGTGGACACCGGGCACTGGCCACTCCTACATCCCCAGCTCCACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000535933.5
ENST00000540946.5
CDS-3UTR TCA 90 bp GTGTGCAGGCCGTGTGGAGCTGGGGATGTAGGAGTGGCCAGTGCCCGGTGTCCAGTTCTGAATTGGCTGTaGTGGGGCCAGTCACACTCA +
Preference number: 4 (lower is better)
Translates to: VCRPCGAGDVGVASARCPVLNWL*WGQSHS
Trigger: TGAGTGTGACTGGCCCCATCACAGCCAATTCAGAAC...TGGACACCGGGCACTGGCCACTCCTACATCCCCAGCTCCACACGGCCTGCACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000581396.5
CDS-3UTR TCA 90 bp GTGTGCAGGCCGTGTGGAGCTGGGGATGTAGGAGTGGCCAGTGCCCGGTGTCCACAACTCCAGATCAGATaGATCCTCCTGTCCAGGGAC +
Preference number: 4 (lower is better)
Translates to: VCRPCGAGDVGVASARCPQLQIR*ILLSRD
Trigger: GTCCCTGGACAGGAGGATTCATCTGATCTGGAGTTG...TGGACACCGGGCACTGGCCACTCCTACATCCCCAGCTCCACACGGCCTGCACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000535933.5
ENST00000540946.5
ENST00000581396.5
CDS-3UTR TCA 90 bp GGAGGCCTGGGAGCAGACACGGTGGCATTTCCATGGAAACACAGGTGTGCAGGCCCCGACAGGTCCTGTTaGGCTCCTGCAGCAACTCCA +
Preference number: 4 (lower is better)
Translates to: GGLGADTVAFPWKHRCAGPDRSC*APAATP
Trigger: TGGAGTTGCTGCAGGAGCTCAACAGGACCTGTCGGG...GCCTGCACACCTGTGTTTCCATGGAAATGCCACCGTGTCTGCTCCCAGGCCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000535933.5
ENST00000540946.5
ENST00000581396.5
CDS-3UTR TCA 90 bp GGCCTGGGAGCAGACACGGTGGCATTTCCATGGAAACACAGGTGTGCAGGCCGTCCCGACAGGTCCTGTTaGGCTCCTGCAGCAACTCCA +
Preference number: 4 (lower is better)
Translates to: GLGADTVAFPWKHRCAGRPDRSC*APAATP
Trigger: TGGAGTTGCTGCAGGAGCTCAACAGGACCTGTCGGG...ACGGCCTGCACACCTGTGTTTCCATGGAAATGCCACCGTGTCTGCTCCCAGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000535933.5
ENST00000540946.5
ENST00000581396.5
CDS-3UTR TCA 90 bp CTGGGCTGGCAGCTGAATGATGGAGAGAGGGTCAAGAAGGTGAGAGACCCCCACTGGACACGCGGGAGATaGGCTCCACGATGCGCTGCT +
Preference number: 4 (lower is better)
Translates to: LGWQLNDGERVKKVRDPHWTRGR*APRCAA
Trigger: AGCAGCGCATCGTGGAGCTCATCTCCCGCGTGTCCA...GTGGGGGTCTCTCACCTTCTTGACCCTCTCTCCATCATTCAGCTGCCAGCCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000478943.5
ENST00000581396.5
CDS-3UTR TCA 90 bp CCTGGGAGCAGACACGGTGGCATTTCCATGGAAACACAGGTGTGCAGGCCGTGTGCAGCAGCTCCTCGGTaGCCTCCTCATTGGACACGC +
Preference number: 4 (lower is better)
Translates to: PGSRHGGISMETQVCRPCAAAPR*PPHWTR
Trigger: GCGTGTCCAATGAGGAGGTCACCGAGGAGCTGCTGC...ACACGGCCTGCACACCTGTGTTTCCATGGAAATGCCACCGTGTCTGCTCCCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000535933.5
ENST00000540946.5
ENST00000581396.5
CDS-3UTR TCA 90 bp ACAGGTGTGCAGGCCGTGTGGAGCTGGGGATGTAGGAGTGGCCAGTGCCCGGTGCCATTACTGGCATTTTaGACGGATCGGCCAGACCTG +
Preference number: 4 (lower is better)
Translates to: TGVQAVWSWGCRSGQCPVPLLAF*TDRPDL
Trigger: CAGGTCTGGCCGATCCGTTCAAAATGCCAGTAATGG...CACCGGGCACTGGCCACTCCTACATCCCCAGCTCCACACGGCCTGCACACCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000535933.5
ENST00000540946.5
ENST00000581396.5
CDS-3UTR TCA 90 bp CATGGAAACACAGGTGTGCAGGCCGTGTGGAGCTGGGGATGTAGGAGTGGCCAGGAAGAGGGCATCCTCTaGCCGCTCTGGCTTCTTCCG +
Preference number: 4 (lower is better)
Translates to: HGNTGVQAVWSWGCRSGQEEGIL*PLWLLP
Trigger: CGGAAGAAGCCAGAGCGGTCAGAGGATGCCCTCTTC...CTGGCCACTCCTACATCCCCAGCTCCACACGGCCTGCACACCTGTGTTTCCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000535933.5
ENST00000540946.5
ENST00000581396.5
CDS-3UTR TCA 90 bp CTGAATGCTCCCCAACGACCATGTCGCTGGTCTCTTCTCCCGTCAAGCCCAGCCGCCTGGGCTGGCAGCTaGATGATGGAGAGAGGGTCA +
Preference number: 4 (lower is better)
Translates to: LNAPQRPCRWSLLPSSPAAWAGS*MMERGS
Trigger: TGACCCTCTCTCCATCATTCAGCTGCCAGCCCAGGC...GGCTGGGCTTGACGGGAGAAGAGACCAGCGACATGGTCGTTGGGGAGCATTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR TCA 90 bp CTAGTGGGAGGCCTGGGAGCAGACACGGTGGCATTTCCATGGAAACACAGGTGTGCCAGGCTCGGCTGCTaGGCCAGCTTGGGTGTGAAG +
Preference number: 4 (lower is better)
Translates to: LVGGLGADTVAFPWKHRCARLGC*ASLGVK
Trigger: CTTCACACCCAAGCTGGCTCAGCAGCCGAGCCTGGC...ACACCTGTGTTTCCATGGAAATGCCACCGTGTCTGCTCCCAGGCCTCCCACTAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000478943.5
ENST00000581396.5
CDS-3UTR TCA 90 bp AACACAGGTGTGCAGGCCGTGTGGAGCTGGGGATGTAGGAGTGGCCAGTGCCCGTGTGCACAACGCCGGTaGGATCAGGACTGCTTCGAA +
Preference number: 4 (lower is better)
Translates to: NTGVQAVWSWGCRSGQCPCAQRR*DQDCFE
Trigger: TTCGAAGCAGTCCTGATCTCACCGGCGTTGTGCACA...CGGGCACTGGCCACTCCTACATCCCCAGCTCCACACGGCCTGCACACCTGTGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379504.8
ENST00000535933.5
ENST00000581396.5
CDS-3UTR TCA 90 bp AGCCTGGGCTGGCAGCTGAATGATGGAGAGAGGGTCAAGAAGGTGAGAGACCCCCTTGAGGCAGATGTGTaGGGCTACGGCAGGCCAGGC +
Preference number: 4 (lower is better)
Translates to: SLGWQLNDGERVKKVRDPLEADV*GYGRPG
Trigger: GCCTGGCCTGCCGTAGCCTCACACATCTGCCTCAAG...GGGGTCTCTCACCTTCTTGACCCTCTCTCCATCATTCAGCTGCCAGCCCAGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR TCA 90 bp CAGGTGTGCAGGCCGTGTGGAGCTGGGGATGTAGGAGTGGCCAGTGCCCGGTGTTTTGCTGCTGGCTCTTaGGGCAGATGTGTGAGGCTA +
Preference number: 4 (lower is better)
Translates to: QVCRPCGAGDVGVASARCFAAGS*GRCVRL
Trigger: TAGCCTCACACATCTGCCTCAAGAGCCAGCAGCAAA...ACACCGGGCACTGGCCACTCCTACATCCCCAGCTCCACACGGCCTGCACACCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR TCA 90 bp AGAGAAAAGAAGTGGCTGAAGCTGGTCCTGACTAGTGGGAGGCCTGGGAGCAGAGGGACAGGAGCAGACTaGCCCAGCGAGCTGGGCCCA +
Preference number: 4 (lower is better)
Translates to: REKKWLKLVLTSGRPGSRGTGAD*PSELGP
Trigger: TGGGCCCAGCTCGCTGGGTCAGTCTGCTCCTGTCCC...TCTGCTCCCAGGCCTCCCACTAGTCAGGACCAGCTTCAGCCACTTCTTTTCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR TCA 90 bp CTGAATGCTCCCCAACGACCATGTCGCTGGTCTCTTCTCCCGTCAAGCCCAGCCTGTTGGTGCTCAGCATaGCCCCCAGCTGAAGTCGCC +
Preference number: 4 (lower is better)
Translates to: LNAPQRPCRWSLLPSSPACWCSA*PPAEVA
Trigger: GGCGACTTCAGCTGGGGGTCATGCTGAGCACCAACA...GGCTGGGCTTGACGGGAGAAGAGACCAGCGACATGGTCGTTGGGGAGCATTCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR TCA 90 bp ATGGAAACACAGGTGTGCAGGCCGTGTGGAGCTGGGGATGTAGGAGTGGCCAGTGCCAGGCCTCTCCAATaGTGCCTGGCAACCAGCTGG +
Preference number: 4 (lower is better)
Translates to: METQVCRPCGAGDVGVASARPLQ*CLATSW
Trigger: CCAGCTGGTTGCCAGGCATCATTGGAGAGGCCTGGC...ACTGGCCACTCCTACATCCCCAGCTCCACACGGCCTGCACACCTGTGTTTCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR TCA 90 bp GGTGCCAGGGGCCCAACTGCACATAGCGCCATTCTCTGCCGCCCAGTGGCCAAAAAGGCTGGGCCCAACTaGGTTAGAGATGCGTGTCTG +
Preference number: 4 (lower is better)
Translates to: GARGPTAHSAILCRPVAKKAGPN*VRDACL
Trigger: CAGACACGCATCTCTAACTCAGTTGGGCCCAGCCTT...TTTGGCCACTGGGCGGCAGAGAATGGCGCTATGTGCAGTTGGGCCCCTGGCACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR TCA 90 bp TGGCAGGGCCTCAGAGACAACCCAAGTCACAACCCAAAGGCAGCCAAAGGGCTGGGTGGATGGATGCTCTaGGCCTCGGGTGCACTGACC +
Preference number: 4 (lower is better)
Translates to: WQGLRDNPSHNPKAAKGLGGWML*ASGALT
Trigger: GGTCAGTGCACCCGAGGCTCAGAGCATCCATCCACC...CAGCCCTTTGGCTGCCTTTGGGTTGTGACTTGGGTTGTCTCTGAGGCCCTGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR GCA 90 bp TGCAGGCCGTGTGGAGCTGGGGATGTAGGAGTGGCCAGTGCCCGGTGTCCACGGGTCCTGTTGAGCTCCTaGAGCAACTCCAGATCAGAT +
Preference number: 4 (lower is better)
Translates to: CRPCGAGDVGVASARCPRVLLSS*SNSRSD
Trigger: ATCTGATCTGGAGTTGCTGCAGGAGCTCAACAGGAC...CCGTGGACACCGGGCACTGGCCACTCCTACATCCCCAGCTCCACACGGCCTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000535933.5
ENST00000540946.5
ENST00000581396.5
CDS-3UTR GCA 90 bp CTCTTTCTCCATGGGCGGGTGGAGGAAAGACAGTCCGGGTGGTCTGCTCAGGAAAGCTCCACGATGCGCTaGTGCATGGCCCGACAGGTC +
Preference number: 4 (lower is better)
Translates to: LFLHGRVEERQSGWSAQESSTMR*CMARQV
Trigger: GACCTGTCGGGCCATGCAGCAGCGCATCGTGGAGCT...TTCCTGAGCAGACCACCCGGACTGTCTTTCCTCCACCCGCCCATGGAGAAAGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000478943.5
ENST00000581396.5
CDS-3UTR GCA 90 bp CTGGGAGCAGACACGGTGGCATTTCCATGGAAACACAGGTGTGCAGGCCGTGTGAGCTCCACGATGCGCTaGTGCATGGCCCGACAGGTC +
Preference number: 4 (lower is better)
Translates to: LGADTVAFPWKHRCAGRVSSTMR*CMARQV
Trigger: GACCTGTCGGGCCATGCAGCAGCGCATCGTGGAGCT...CACACGGCCTGCACACCTGTGTTTCCATGGAAATGCCACCGTGTCTGCTCCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000535933.5
ENST00000540946.5
ENST00000581396.5
CDS-3UTR GCA 90 bp TGGGAGCAGACACGGTGGCATTTCCATGGAAACACAGGTGTGCAGGCCGTGTGGAGCTCCACGATGCGCTaGTGCATGGCCCGACAGGTC +
Preference number: 4 (lower is better)
Translates to: WEQTRWHFHGNTGVQAVWSSTMR*CMARQV
Trigger: GACCTGTCGGGCCATGCAGCAGCGCATCGTGGAGCT...CCACACGGCCTGCACACCTGTGTTTCCATGGAAATGCCACCGTGTCTGCTCCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000535933.5
ENST00000540946.5
ENST00000581396.5
CDS-3UTR GCA 90 bp CCTGGGAGCAGACACGGTGGCATTTCCATGGAAACACAGGTGTGCAGGCCGTGTAGCTCCACGATGCGCTaGTGCATGGCCCGACAGGTC +
Preference number: 4 (lower is better)
Translates to: PGSRHGGISMETQVCRPCSSTMR*CMARQV
Trigger: GACCTGTCGGGCCATGCAGCAGCGCATCGTGGAGCT...ACACGGCCTGCACACCTGTGTTTCCATGGAAATGCCACCGTGTCTGCTCCCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000535933.5
ENST00000540946.5
ENST00000581396.5
CDS-3UTR GCA 90 bp AGACACGGTGGCATTTCCATGGAAACACAGGTGTGCAGGCCGTGTGGAGCTGGGAGCTCCACGATGCGCTaGTGCATGGCCCGACAGGTC +
Preference number: 4 (lower is better)
Translates to: RHGGISMETQVCRPCGAGSSTMR*CMARQV
Trigger: GACCTGTCGGGCCATGCAGCAGCGCATCGTGGAGCT...CCCAGCTCCACACGGCCTGCACACCTGTGTTTCCATGGAAATGCCACCGTGTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000535933.5
ENST00000540946.5
ENST00000581396.5
CDS-3UTR GCA 90 bp CAGGTGTGCAGGCCGTGTGGAGCTGGGGATGTAGGAGTGGCCAGTGCCCGGTGTGTTACCGTCTTGCGCTaGTCAGCCAAGGAGTTTCCT +
Preference number: 4 (lower is better)
Translates to: QVCRPCGAGDVGVASARCVTVLR*SAKEFP
Trigger: AGGAAACTCCTTGGCTGAGCAGCGCAAGACGGTAAC...ACACCGGGCACTGGCCACTCCTACATCCCCAGCTCCACACGGCCTGCACACCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000535933.5
ENST00000540946.5
ENST00000581396.5
CDS-3UTR GCA 90 bp ACAGGGCGGGGCCGGGCGTGCTCTTTCTCCATGGGCGGGTGGAGGAAAGACAGTGTTACCGTCTTGCGCTaGTCAGCCAAGGAGTTTCCT +
Preference number: 4 (lower is better)
Translates to: TGRGRACSFSMGGWRKDSVTVLR*SAKEFP
Trigger: AGGAAACTCCTTGGCTGAGCAGCGCAAGACGGTAAC...ACTGTCTTTCCTCCACCCGCCCATGGAGAAAGAGCACGCCCGGCCCCGCCCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000478943.5
ENST00000581396.5
CDS-3UTR GCA 90 bp AGGCCTGGGAGCAGACACGGTGGCATTTCCATGGAAACACAGGTGTGCAGGCCGGGCAAACCACAGAGCTaGTCACAGGGCGAAGAGGGC +
Preference number: 4 (lower is better)
Translates to: RPGSRHGGISMETQVCRPGKPQS*SQGEEG
Trigger: GCCCTCTTCGCCCTGTGAGCAGCTCTGTGGTTTGCC...CGGCCTGCACACCTGTGTTTCCATGGAAATGCCACCGTGTCTGCTCCCAGGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000535933.5
ENST00000540946.5
ENST00000581396.5
CDS-3UTR GCA 90 bp GGCCTGGGAGCAGACACGGTGGCATTTCCATGGAAACACAGGTGTGCAGGCCGTGGCAAACCACAGAGCTaGTCACAGGGCGAAGAGGGC +
Preference number: 4 (lower is better)
Translates to: GLGADTVAFPWKHRCAGRGKPQS*SQGEEG
Trigger: GCCCTCTTCGCCCTGTGAGCAGCTCTGTGGTTTGCC...ACGGCCTGCACACCTGTGTTTCCATGGAAATGCCACCGTGTCTGCTCCCAGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000535933.5
ENST00000540946.5
ENST00000581396.5
CDS-3UTR GCA 90 bp GGAGGCCTGGGAGCAGACACGGTGGCATTTCCATGGAAACACAGGTGTGCAGGCGGCAAACCACAGAGCTaGTCACAGGGCGAAGAGGGC +
Preference number: 4 (lower is better)
Translates to: GGLGADTVAFPWKHRCAGGKPQS*SQGEEG
Trigger: GCCCTCTTCGCCCTGTGAGCAGCTCTGTGGTTTGCC...GCCTGCACACCTGTGTTTCCATGGAAATGCCACCGTGTCTGCTCCCAGGCCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000535933.5
ENST00000540946.5
ENST00000581396.5
CDS-3UTR GCA 90 bp AGCAGACACGGTGGCATTTCCATGGAAACACAGGTGTGCAGGCCGTGTGGAGCTTGTAGGAGTGGCCAGTaGCCGGTGTCCACGGGGTGC +
Preference number: 4 (lower is better)
Translates to: SRHGGISMETQVCRPCGACRSGQ*PVSTGC
Trigger: GCACCCCGTGGACACCGGGCACTGGCCACTCCTACA...AGCTCCACACGGCCTGCACACCTGTGTTTCCATGGAAATGCCACCGTGTCTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000535933.5
ENST00000540946.5
ENST00000581396.5
CDS-3UTR GCA 90 bp AGGCCTGGGAGCAGACACGGTGGCATTTCCATGGAAACACAGGTGTGCAGGCCGACAGTCCGGGTGGTCTaGTCAGGAAGCACTGCCTGG +
Preference number: 4 (lower is better)
Translates to: RPGSRHGGISMETQVCRPTVRVV*SGSTAW
Trigger: CCAGGCAGTGCTTCCTGAGCAGACCACCCGGACTGT...CGGCCTGCACACCTGTGTTTCCATGGAAATGCCACCGTGTCTGCTCCCAGGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000478943.5
ENST00000581396.5
CDS-3UTR GCA 90 bp AGGGGAGAGAGTCTCTGGCTGCAGTTGTCCCACCACTCAGAGAAAAGAAGTGGCTGCAGGGACCCTCGGTaGCAGGCTCGGCTGCTGAGC +
Preference number: 4 (lower is better)
Translates to: RGESLWLQLSHHSEKRSGCRDPR*QARLLS
Trigger: GCTCAGCAGCCGAGCCTGGCACCGAGGGTCCCTGCA...GCCACTTCTTTTCTCTGAGTGGTGGGACAACTGCAGCCAGAGACTCTCTCCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000478943.5
ENST00000581396.5
CDS-3UTR GCA 90 bp ATGGAAACACAGGTGTGCAGGCCGTGTGGAGCTGGGGATGTAGGAGTGGCCAGTCTGCGGGCTGCCTGCTaGCCTCCCAATTGTCCTTGG +
Preference number: 4 (lower is better)
Translates to: METQVCRPCGAGDVGVASLRAAC*PPNCPW
Trigger: CCAAGGACAATTGGGAGGGCAGCAGGCAGCCCGCAG...ACTGGCCACTCCTACATCCCCAGCTCCACACGGCCTGCACACCTGTGTTTCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000478943.5
ENST00000581396.5
CDS-3UTR GCA 90 bp TGGGAGCAGACACGGTGGCATTTCCATGGAAACACAGGTGTGCAGGCCGTGTGGCCACCATCTGCGGGCTaGCTGCTGCCCTCCCAATTG +
Preference number: 4 (lower is better)
Translates to: WEQTRWHFHGNTGVQAVWPPSAG*LLPSQL
Trigger: CAATTGGGAGGGCAGCAGGCAGCCCGCAGATGGTGG...CCACACGGCCTGCACACCTGTGTTTCCATGGAAATGCCACCGTGTCTGCTCCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000478943.5
ENST00000581396.5
CDS-3UTR GCA 90 bp AACACAGGTGTGCAGGCCGTGTGGAGCTGGGGATGTAGGAGTGGCCAGTGCCCGCCCAGCCACCTTTTCTaGAGCTCAAGTGAAGCCAGC +
Preference number: 4 (lower is better)
Translates to: NTGVQAVWSWGCRSGQCPPSHLF*SSSEAS
Trigger: GCTGGCTTCACTTGAGCTGCAGAAAAGGTGGCTGGG...CGGGCACTGGCCACTCCTACATCCCCAGCTCCACACGGCCTGCACACCTGTGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR GCA 90 bp CATGGATCAGGAACCTGTGCTGACCTAGGCAGTGCATGCTGGAGGGGACAGGAGAGCAAGAGCCCCCTCTaGCTACAGGTGGGGCAGGCT +
Preference number: 4 (lower is better)
Translates to: HGSGTCADLGSACWRGQESKSPL*LQVGQA
Trigger: AGCCTGCCCCACCTGTAGGCAGAGGGGGCTCTTGCT...CTCCTGTCCCCTCCAGCATGCACTGCCTAGGTCAGCACAGGTTCCTGATCCATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR GCA 90 bp CTGGGCTGGCAGCTGAATGATGGAGAGAGGGTCAAGAAGGTGAGAGACCCCCACGCCAAAGGCCCATGGTaGCAGGGGCCCAACTGCACA +
Preference number: 4 (lower is better)
Translates to: LGWQLNDGERVKKVRDPHAKGPW*QGPNCT
Trigger: TGTGCAGTTGGGCCCCTGGCACCATGGGCCTTTGGC...GTGGGGGTCTCTCACCTTCTTGACCCTCTCTCCATCATTCAGCTGCCAGCCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR GCA 90 bp CAGACACGGTGGCATTTCCATGGAAACACAGGTGTGCAGGCCGTGTGGAGCTGGCAGGCAGGGCTACTCTaGAGCAGGCAGGCCAAAGGC +
Preference number: 4 (lower is better)
Translates to: QTRWHFHGNTGVQAVWSWQAGLL*SRQAKG
Trigger: GCCTTTGGCCTGCCTGCTGCAGAGTAGCCCTGCCTG...CCAGCTCCACACGGCCTGCACACCTGTGTTTCCATGGAAATGCCACCGTGTCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR GCA 90 bp AGGCCTGGGAGCAGACACGGTGGCATTTCCATGGAAACACAGGTGTGCAGGCCGTCAGTGCCTGGAGACTaGCCAGGCAGGGCTACTCTG +
Preference number: 4 (lower is better)
Translates to: RPGSRHGGISMETQVCRPSVPGD*PGRATL
Trigger: CAGAGTAGCCCTGCCTGGGCAGTCTCCAGGCACTGA...CGGCCTGCACACCTGTGTTTCCATGGAAATGCCACCGTGTCTGCTCCCAGGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR GCA 90 bp AGCCTGGGCTGGCAGCTGAATGATGGAGAGAGGGTCAAGAAGGTGAGAGACCCCGCTCTGAGCCTCGGGTaGACTGACCCACCCTCCAGA +
Preference number: 4 (lower is better)
Translates to: SLGWQLNDGERVKKVRDPALSLG*TDPPSR
Trigger: TCTGGAGGGTGGGTCAGTGCACCCGAGGCTCAGAGC...GGGGTCTCTCACCTTCTTGACCCTCTCTCCATCATTCAGCTGCCAGCCCAGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR GCA 90 bp GGCCTGGGAGCAGACACGGTGGCATTTCCATGGAAACACAGGTGTGCAGGCCGTAGTGGGGTGGATGGATaGTCTGAGCCTCGGGTGCAC +
Preference number: 4 (lower is better)
Translates to: GLGADTVAFPWKHRCAGRSGVDG*SEPRVH
Trigger: GTGCACCCGAGGCTCAGAGCATCCATCCACCCCACT...ACGGCCTGCACACCTGTGTTTCCATGGAAATGCCACCGTGTCTGCTCCCAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR GCA 90 bp ATGGAAACACAGGTGTGCAGGCCGTGTGGAGCTGGGGATGTAGGAGTGGCCAGTGGGCTCTCAAAAAGCTaGCTGGGCCTTGGGGCCTGC +
Preference number: 4 (lower is better)
Translates to: METQVCRPCGAGDVGVASGLSKS*LGLGAC
Trigger: GCAGGCCCCAAGGCCCAGGCAGCTTTTTGAGAGCCC...ACTGGCCACTCCTACATCCCCAGCTCCACACGGCCTGCACACCTGTGTTTCCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000478943.5
CDS-3UTR CCA 90 bp GGCCAGACTGTCAGGAGAGTCTGTGCAAGGAGGCCAAGGCCTATGCCAGGGAGCGCTGTGATTGGGACCTaGGCATGGTCGCAGCTGGAT +
Preference number: 4 (lower is better)
Translates to: GQTVRRVCARRPRPMPGSAVIGT*AWSQLD
Trigger: ATCCAGCTGCGACCATGCCCAGGTCCCAATCACAGC...GCTCCCTGGCATAGGCCTTGGCCTCCTTGCACAGACTCTCCTGACAGTCTGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR CCA 90 bp AGGGCGGGGCCGGGCGTGCTCTTTCTCCATGGGCGGGTGGAGGAAAGACAGTCCGTTCACTCCGCAGCCTaGCAATCTGTTCTGAATTGG +
Preference number: 4 (lower is better)
Translates to: RAGPGVLFLHGRVEERQSVHSAA*QSVLNW
Trigger: CCAATTCAGAACAGATTGCCAGGCTGCGGAGTGAAC...GGACTGTCTTTCCTCCACCCGCCCATGGAGAAAGAGCACGCCCGGCCCCGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000581396.5
CDS-3UTR CCA 90 bp CTGGGAGCAGACACGGTGGCATTTCCATGGAAACACAGGTGTGCAGGCCGTGTGGGAGGAGAGGGAAGATaGGGGCGCTGTGTTCCCCAC +
Preference number: 4 (lower is better)
Translates to: LGADTVAFPWKHRCAGRVGGEGR*GRCVPH
Trigger: GTGGGGAACACAGCGCCCCCATCTTCCCTCTCCTCC...CACACGGCCTGCACACCTGTGTTTCCATGGAAATGCCACCGTGTCTGCTCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000535933.5
ENST00000540946.5
ENST00000581396.5
CDS-3UTR CCA 90 bp GGCCTGGGAGCAGACACGGTGGCATTTCCATGGAAACACAGGTGTGCAGGCCGTGTCGTCCATGACAGATaGCTGCGCAACGGGGATCCC +
Preference number: 4 (lower is better)
Translates to: GLGADTVAFPWKHRCAGRVVHDR*LRNGDP
Trigger: GGGATCCCCGTTGCGCAGCCATCTGTCATGGACGAC...ACGGCCTGCACACCTGTGTTTCCATGGAAATGCCACCGTGTCTGCTCCCAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000581396.5
CDS-3UTR CCA 90 bp CAGTTTGGTTTATTGGTAGTGTCGTCTCAGCAGCGTGCCACATGGCCACCATCTGGGCAGGAGCCTCCATaGGGGGCGAGGGGAGGTCGG +
Preference number: 4 (lower is better)
Translates to: QFGLLVVSSQQRATWPPSGQEPP*GARGGR
Trigger: CCGACCTCCCCTCGCCCCCCATGGAGGCTCCTGCCC...AGATGGTGGCCATGTGGCACGCTGCTGAGACGACACTACCAATAAACCAAACTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000478943.5
ENST00000581396.5
CDS-3UTR CCA 90 bp GGCTGGCAGCTGAATGATGGAGAGAGGGTCAAGAAGGTGAGAGACCCCCACCATCGGGGACCCGCCATCTaGGGAGGCAAACCACAGAGC +
Preference number: 4 (lower is better)
Translates to: GWQLNDGERVKKVRDPHHRGPAI*GGKPQS
Trigger: GCTCTGTGGTTTGCCTCCCCAGATGGCGGGTCCCCG...ATGGTGGGGGTCTCTCACCTTCTTGACCCTCTCTCCATCATTCAGCTGCCAGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000478943.5
ENST00000581396.5
CDS-3UTR CCA 90 bp AGCAGACACGGTGGCATTTCCATGGAAACACAGGTGTGCAGGCCGTGTGGAGCTCGGGGACCCGCCATCTaGGGAGGCAAACCACAGAGC +
Preference number: 4 (lower is better)
Translates to: SRHGGISMETQVCRPCGARGPAI*GGKPQS
Trigger: GCTCTGTGGTTTGCCTCCCCAGATGGCGGGTCCCCG...AGCTCCACACGGCCTGCACACCTGTGTTTCCATGGAAATGCCACCGTGTCTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000535933.5
ENST00000540946.5
ENST00000581396.5
CDS-3UTR CCA 90 bp GGCATTTCCATGGAAACACAGGTGTGCAGGCCGTGTGGAGCTGGGGATGTAGGACGGGGACCCGCCATCTaGGGAGGCAAACCACAGAGC +
Preference number: 4 (lower is better)
Translates to: GISMETQVCRPCGAGDVGRGPAI*GGKPQS
Trigger: GCTCTGTGGTTTGCCTCCCCAGATGGCGGGTCCCCG...TCCTACATCCCCAGCTCCACACGGCCTGCACACCTGTGTTTCCATGGAAATGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000535933.5
ENST00000540946.5
ENST00000581396.5
CDS-3UTR CCA 90 bp AGACACGGTGGCATTTCCATGGAAACACAGGTGTGCAGGCCGTGTGGAGCTGGGCAGGCCGTGTGGAGCTaGGGATGTAGGAGTGGCCAG +
Preference number: 4 (lower is better)
Translates to: RHGGISMETQVCRPCGAGQAVWS*GCRSGQ
Trigger: CTGGCCACTCCTACATCCCCAGCTCCACACGGCCTG...CCCAGCTCCACACGGCCTGCACACCTGTGTTTCCATGGAAATGCCACCGTGTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000535933.5
ENST00000540946.5
ENST00000581396.5
CDS-3UTR CCA 90 bp ATGGAAACACAGGTGTGCAGGCCGTGTGGAGCTGGGGATGTAGGAGTGGCCAGTCAGGCCGTGTGGAGCTaGGGATGTAGGAGTGGCCAG +
Preference number: 4 (lower is better)
Translates to: METQVCRPCGAGDVGVASQAVWS*GCRSGQ
Trigger: CTGGCCACTCCTACATCCCCAGCTCCACACGGCCTG...ACTGGCCACTCCTACATCCCCAGCTCCACACGGCCTGCACACCTGTGTTTCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000535933.5
ENST00000540946.5
ENST00000581396.5
CDS-3UTR CCA 90 bp GGAGGCCTGGGAGCAGACACGGTGGCATTTCCATGGAAACACAGGTGTGCAGGCGGTGTGCAGGCCGTGTaGAGCTGGGGATGTAGGAGT +
Preference number: 4 (lower is better)
Translates to: GGLGADTVAFPWKHRCAGGVQAV*SWGCRS
Trigger: ACTCCTACATCCCCAGCTCCACACGGCCTGCACACC...GCCTGCACACCTGTGTTTCCATGGAAATGCCACCGTGTCTGCTCCCAGGCCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000535933.5
ENST00000540946.5
ENST00000581396.5
CDS-3UTR CCA 90 bp GTAACCCAAGTGGGTGAGACGTCCCCAAAGCCGACAGTGCAGAAGCTCCCAGGGGGTGTGCAGGCCGTGTaGAGCTGGGGATGTAGGAGT +
Preference number: 4 (lower is better)
Translates to: VTQVGETSPKPTVQKLPGGVQAV*SWGCRS
Trigger: ACTCCTACATCCCCAGCTCCACACGGCCTGCACACC...CCCTGGGAGCTTCTGCACTGTCGGCTTTGGGGACGTCTCACCCACTTGGGTTAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR CCA 90 bp GTAACCCAAGTGGGTGAGACGTCCCCAAAGCCGACAGTGCAGAAGCTCCCAGGGGAGAGACCCCCACCATaGAGACCCAGCAGAGCCTTC +
Preference number: 4 (lower is better)
Translates to: VTQVGETSPKPTVQKLPGERPPP*RPSRAF
Trigger: GAAGGCTCTGCTGGGTCTCCATGGTGGGGGTCTCTC...CCCTGGGAGCTTCTGCACTGTCGGCTTTGGGGACGTCTCACCCACTTGGGTTAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR CCA 90 bp GGAGGCCTGGGAGCAGACACGGTGGCATTTCCATGGAAACACAGGTGTGCAGGCGAGAGACCCCCACCATaGAGACCCAGCAGAGCCTTC +
Preference number: 4 (lower is better)
Translates to: GGLGADTVAFPWKHRCAGERPPP*RPSRAF
Trigger: GAAGGCTCTGCTGGGTCTCCATGGTGGGGGTCTCTC...GCCTGCACACCTGTGTTTCCATGGAAATGCCACCGTGTCTGCTCCCAGGCCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000478943.5
ENST00000581396.5
CDS-3UTR CCA 90 bp CAGAGCAATACCTCCAGTGCAAGTCCCTCCACAAGCCAGGACCAGGTGTGCGGGCGAGTCCCTTGCCCATaGCCAGGAGACACACCAGTG +
Preference number: 4 (lower is better)
Translates to: QSNTSSASPSTSQDQVCGRVPCP*PGDTPV
Trigger: CACTGGTGTGTCTCCTGGCCATGGGCAAGGGACTCG...CCCGCACACCTGGTCCTGGCTTGTGGAGGGACTTGCACTGGAGGTATTGCTCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR CCA 90 bp ATGGAAACACAGGTGTGCAGGCCGTGTGGAGCTGGGGATGTAGGAGTGGCCAGTACTGACCCAGCGAGCTaGGCCCAAGACACACGGGGA +
Preference number: 4 (lower is better)
Translates to: METQVCRPCGAGDVGVASTDPAS*AQDTRG
Trigger: TCCCCGTGTGTCTTGGGCCCAGCTCGCTGGGTCAGT...ACTGGCCACTCCTACATCCCCAGCTCCACACGGCCTGCACACCTGTGTTTCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR CCA 90 bp CTGGGCTGGCAGCTGAATGATGGAGAGAGGGTCAAGAAGGTGAGAGACCCCCACACTGACCCAGCGAGCTaGGCCCAAGACACACGGGGA +
Preference number: 4 (lower is better)
Translates to: LGWQLNDGERVKKVRDPHTDPAS*AQDTRG
Trigger: TCCCCGTGTGTCTTGGGCCCAGCTCGCTGGGTCAGT...GTGGGGGTCTCTCACCTTCTTGACCCTCTCTCCATCATTCAGCTGCCAGCCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR CCA 90 bp GAAAAGAAGTGGCTGAAGCTGGTCCTGACTAGTGGGAGGCCTGGGAGCAGACACTCCCTGCTTGGCTGGTaGTCTGGGCCGTCCTGCCAG +
Preference number: 4 (lower is better)
Translates to: EKKWLKLVLTSGRPGSRHSLLGW*SGPSCQ
Trigger: CTGGCAGGACGGCCCAGACCACCAGCCAAGCAGGGA...GTGTCTGCTCCCAGGCCTCCCACTAGTCAGGACCAGCTTCAGCCACTTCTTTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR CCA 90 bp AGGCCGTGTGGAGCTGGGGATGTAGGAGTGGCCAGTGCCCGGTGTCCACGGGGTGTGAACCTGAGCAACTaGAGTGAGACATCCCAGCTA +
Preference number: 4 (lower is better)
Translates to: RPCGAGDVGVASARCPRGVNLSN*SETSQL
Trigger: TAGCTGGGATGTCTCACTCCAGTTGCTCAGGTTCAC...ACCCCGTGGACACCGGGCACTGGCCACTCCTACATCCCCAGCTCCACACGGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR CCA 90 bp GAAACACAGGTGTGCAGGCCGTGTGGAGCTGGGGATGTAGGAGTGGCCAGTGCCCACGGAGGAGCTTCCTaGGTGAACCTGAGCAACTGG +
Preference number: 4 (lower is better)
Translates to: ETQVCRPCGAGDVGVASAHGGAS*VNLSNW
Trigger: CCAGTTGCTCAGGTTCACCCAGGAAGCTCCTCCGTG...GGCACTGGCCACTCCTACATCCCCAGCTCCACACGGCCTGCACACCTGTGTTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR CCA 90 bp AGCCTGGGCTGGCAGCTGAATGATGGAGAGAGGGTCAAGAAGGTGAGAGACCCCAGGCCACCTGAGGGGTaGCTCCAGGCTAGGAAGGCA +
Preference number: 4 (lower is better)
Translates to: SLGWQLNDGERVKKVRDPRPPEG*LQARKA
Trigger: TGCCTTCCTAGCCTGGAGCCACCCCTCAGGTGGCCT...GGGGTCTCTCACCTTCTTGACCCTCTCTCCATCATTCAGCTGCCAGCCCAGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR CCA 90 bp CAGAGCAATACCTCCAGTGCAAGTCCCTCCACAAGCCAGGACCAGGTGTGCGGGCACTCACGGAGAGGCTaGTGGGCCTTGAGAGTCCAG +
Preference number: 4 (lower is better)
Translates to: QSNTSSASPSTSQDQVCGHSRRG*WALRVQ
Trigger: CTGGACTCTCAAGGCCCACCAGCCTCTCCGTGAGTG...CCCGCACACCTGGTCCTGGCTTGTGGAGGGACTTGCACTGGAGGTATTGCTCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR CCA 90 bp AGAGAAAAGAAGTGGCTGAAGCTGGTCCTGACTAGTGGGAGGCCTGGGAGCAGATGGCCTGGCCCCAGGTaGGCCCATGGCCTACCCCAA +
Preference number: 4 (lower is better)
Translates to: REKKWLKLVLTSGRPGSRWPGPR*AHGLPQ
Trigger: TTGGGGTAGGCCATGGGCCCACCTGGGGCCAGGCCA...TCTGCTCCCAGGCCTCCCACTAGTCAGGACCAGCTTCAGCCACTTCTTTTCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR CCA 90 bp GTGTGCAGGCCGTGTGGAGCTGGGGATGTAGGAGTGGCCAGTGCCCGGTGTCCACCTCTACCTCTCTTCTaGGCCGAGGACAGAAAAGTC +
Preference number: 4 (lower is better)
Translates to: VCRPCGAGDVGVASARCPPLPLF*AEDRKV
Trigger: GACTTTTCTGTCCTCGGCCCAGAAGAGAGGTAGAGG...TGGACACCGGGCACTGGCCACTCCTACATCCCCAGCTCCACACGGCCTGCACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535933.5
CDS-3UTR TCA 90 bp ATGGAAACACAGGTGTGCAGGCCGTGTGGAGCTGGGGATGTAGGAGTGGCCAGTAGTTCCGGTTCCCGTTaGGCCGCTTCTTCAGGGCTC +
Preference number: 4 (lower is better)
Translates to: METQVCRPCGAGDVGVASSSGSR*AASSGL
Trigger: GAGCCCTGAAGAAGCGGCTCAACGGGAACCGGAACT...ACTGGCCACTCCTACATCCCCAGCTCCACACGGCCTGCACACCTGTGTTTCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000535933.5
ENST00000540946.5
ENST00000581396.5
CDS-3UTR TCA 90 bp TGGGAGCAGACACGGTGGCATTTCCATGGAAACACAGGTGTGCAGGCCGTGTGGAGTTCCGGTTCCCGTTaGGCCGCTTCTTCAGGGCTC +
Preference number: 4 (lower is better)
Translates to: WEQTRWHFHGNTGVQAVWSSGSR*AASSGL
Trigger: GAGCCCTGAAGAAGCGGCTCAACGGGAACCGGAACT...CCACACGGCCTGCACACCTGTGTTTCCATGGAAATGCCACCGTGTCTGCTCCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000535933.5
ENST00000540946.5
ENST00000581396.5
CDS-3UTR TCA 90 bp CCTGGGAGCAGACACGGTGGCATTTCCATGGAAACACAGGTGTGCAGGCCGTGTAGTTCCGGTTCCCGTTaGGCCGCTTCTTCAGGGCTC +
Preference number: 4 (lower is better)
Translates to: PGSRHGGISMETQVCRPCSSGSR*AASSGL
Trigger: GAGCCCTGAAGAAGCGGCTCAACGGGAACCGGAACT...ACACGGCCTGCACACCTGTGTTTCCATGGAAATGCCACCGTGTCTGCTCCCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000535933.5
ENST00000540946.5
ENST00000581396.5
CDS-3UTR TCA 90 bp ACAGGTGTGCAGGCCGTGTGGAGCTGGGGATGTAGGAGTGGCCAGTGCCCGGTGCCAGAACACTGTCGATaGAATCTCGGTTGGCCACAA +
Preference number: 4 (lower is better)
Translates to: TGVQAVWSWGCRSGQCPVPEHCR*NLGWPQ
Trigger: TTGTGGCCAACCGAGATTTCATCGACAGTGTTCTGG...CACCGGGCACTGGCCACTCCTACATCCCCAGCTCCACACGGCCTGCACACCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000535933.5
ENST00000540946.5
CDS-3UTR TCA 90 bp AACACAGGTGTGCAGGCCGTGTGGAGCTGGGGATGTAGGAGTGGCCAGTGCCCGCAACTCCAGATCAGATaGATCCTCCTGTCCAGGGAC +
Preference number: 4 (lower is better)
Translates to: NTGVQAVWSWGCRSGQCPQLQIR*ILLSRD
Trigger: GTCCCTGGACAGGAGGATTCATCTGATCTGGAGTTG...CGGGCACTGGCCACTCCTACATCCCCAGCTCCACACGGCCTGCACACCTGTGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000535933.5
ENST00000540946.5
ENST00000581396.5
CDS-3UTR TCA 90 bp TGGGAGCAGACACGGTGGCATTTCCATGGAAACACAGGTGTGCAGGCCGTGTGGCCCGACAGGTCCTGTTaGGCTCCTGCAGCAACTCCA +
Preference number: 4 (lower is better)
Translates to: WEQTRWHFHGNTGVQAVWPDRSC*APAATP
Trigger: TGGAGTTGCTGCAGGAGCTCAACAGGACCTGTCGGG...CCACACGGCCTGCACACCTGTGTTTCCATGGAAATGCCACCGTGTCTGCTCCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000535933.5
ENST00000540946.5
ENST00000581396.5
CDS-3UTR TCA 90 bp AGTGGGAGGCCTGGGAGCAGACACGGTGGCATTTCCATGGAAACACAGGTGTGCCCCGACAGGTCCTGTTaGGCTCCTGCAGCAACTCCA +
Preference number: 4 (lower is better)
Translates to: SGRPGSRHGGISMETQVCPDRSC*APAATP
Trigger: TGGAGTTGCTGCAGGAGCTCAACAGGACCTGTCGGG...GCACACCTGTGTTTCCATGGAAATGCCACCGTGTCTGCTCCCAGGCCTCCCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000535933.5
ENST00000540946.5
ENST00000581396.5
CDS-3UTR TCA 90 bp CTAGTGGGAGGCCTGGGAGCAGACACGGTGGCATTTCCATGGAAACACAGGTGTTGGACACGCGGGAGATaGGCTCCACGATGCGCTGCT +
Preference number: 4 (lower is better)
Translates to: LVGGLGADTVAFPWKHRCWTRGR*APRCAA
Trigger: AGCAGCGCATCGTGGAGCTCATCTCCCGCGTGTCCA...ACACCTGTGTTTCCATGGAAATGCCACCGTGTCTGCTCCCAGGCCTCCCACTAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000535933.5
ENST00000540946.5
ENST00000581396.5
CDS-3UTR TCA 90 bp GGCATTTCCATGGAAACACAGGTGTGCAGGCCGTGTGGAGCTGGGGATGTAGGAGCAGCAGCTCCTCGGTaGCCTCCTCATTGGACACGC +
Preference number: 4 (lower is better)
Translates to: GISMETQVCRPCGAGDVGAAAPR*PPHWTR
Trigger: GCGTGTCCAATGAGGAGGTCACCGAGGAGCTGCTGC...TCCTACATCCCCAGCTCCACACGGCCTGCACACCTGTGTTTCCATGGAAATGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000535933.5
ENST00000540946.5
ENST00000581396.5
CDS-3UTR TCA 90 bp TGCAGGCCGTGTGGAGCTGGGGATGTAGGAGTGGCCAGTGCCCGGTGTCCACGGGAAGGAAGACGTTGTTaGGGTCATCGTTCACATGCA +
Preference number: 4 (lower is better)
Translates to: CRPCGAGDVGVASARCPREGRRC*GHRSHA
Trigger: TGCATGTGAACGATGACCTCAACAACGTCTTCCTTC...CCGTGGACACCGGGCACTGGCCACTCCTACATCCCCAGCTCCACACGGCCTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000535933.5
ENST00000540946.5
ENST00000581396.5
CDS-3UTR TCA 90 bp GTGTGGAGCTGGGGATGTAGGAGTGGCCAGTGCCCGGTGTCCACGGGGTGCGAGGAAGGAAGACGTTGTTaGGGTCATCGTTCACATGCA +
Preference number: 4 (lower is better)
Translates to: VWSWGCRSGQCPVSTGCEEGRRC*GHRSHA
Trigger: TGCATGTGAACGATGACCTCAACAACGTCTTCCTTC...CTCGCACCCCGTGGACACCGGGCACTGGCCACTCCTACATCCCCAGCTCCACAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000535933.5
ENST00000540946.5
ENST00000581396.5
CDS-3UTR TCA 90 bp ACAGGTGTGCAGGCCGTGTGGAGCTGGGGATGTAGGAGTGGCCAGTGCCCGGTGATTACATTGCTGGAGTaGACTGAGGGTGCCACTGAC +
Preference number: 4 (lower is better)
Translates to: TGVQAVWSWGCRSGQCPVITLLE*TEGATD
Trigger: GTCAGTGGCACCCTCAGTTCACTCCAGCAATGTAAT...CACCGGGCACTGGCCACTCCTACATCCCCAGCTCCACACGGCCTGCACACCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000535933.5
ENST00000540946.5
ENST00000581396.5
CDS-3UTR TCA 90 bp AGGCCTGGGAGCAGACACGGTGGCATTTCCATGGAAACACAGGTGTGCAGGCCGCCTTCAGGTCGGTCCTaGGCCACACCTCAATGTCGT +
Preference number: 4 (lower is better)
Translates to: RPGSRHGGISMETQVCRPPSGRS*ATPQCR
Trigger: ACGACATTGAGGTGTGGCTCAGGACCGACCTGAAGG...CGGCCTGCACACCTGTGTTTCCATGGAAATGCCACCGTGTCTGCTCCCAGGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000535933.5
ENST00000581396.5
CDS-3UTR TCA 90 bp AGGCCGTGTGGAGCTGGGGATGTAGGAGTGGCCAGTGCCCGGTGTCCACGGGGTCAAACTCTTCACTTGTaGCACCCTCCTCCAGATCAT +
Preference number: 4 (lower is better)
Translates to: RPCGAGDVGVASARCPRGQTLHL*HPPPDH
Trigger: ATGATCTGGAGGAGGGTGTCACAAGTGAAGAGTTTG...ACCCCGTGGACACCGGGCACTGGCCACTCCTACATCCCCAGCTCCACACGGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000535933.5
ENST00000540946.5
ENST00000581396.5
CDS-3UTR TCA 90 bp ACAAGTCCAAGGAGTGAGACCAGGCCCATGAGTGCAGCACACCCTGCTCTTCCAGTGAGACCAGGCCCATaGGTGCAGCACACCCTGCTC +
Preference number: 4 (lower is better)
Translates to: TSPRSETRPMSAAHPALPVRPGP*VQHTLL
Trigger: GAGCAGGGTGTGCTGCACTCATGGGCCTGGTCTCAC...TGGAAGAGCAGGGTGTGCTGCACTCATGGGCCTGGTCTCACTCCTTGGACTTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000478943.5
ENST00000581396.5
CDS-3UTR TCA 90 bp AGGGGAGAGAGTCTCTGGCTGCAGTTGTCCCACCACTCAGAGAAAAGAAGTGGCCCAGGTGTGCGGGTGTaGGCCTGCAGTGTGTGCGTG +
Preference number: 4 (lower is better)
Translates to: RGESLWLQLSHHSEKRSGPGVRV*ACSVCV
Trigger: CACGCACACACTGCAGGCTCACACCCGCACACCTGG...GCCACTTCTTTTCTCTGAGTGGTGGGACAACTGCAGCCAGAGACTCTCTCCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR TCA 90 bp CATGGAAACACAGGTGTGCAGGCCGTGTGGAGCTGGGGATGTAGGAGTGGCCAGCCATGTGCACATCTGTaGCACTTCCCCAGGCAAGCC +
Preference number: 4 (lower is better)
Translates to: HGNTGVQAVWSWGCRSGQPCAHL*HFPRQA
Trigger: GGCTTGCCTGGGGAAGTGTCACAGATGTGCACATGG...CTGGCCACTCCTACATCCCCAGCTCCACACGGCCTGCACACCTGTGTTTCCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR TCA 90 bp GGCCAGACTGTCAGGAGAGTCTGTGCAAGGAGGCCAAGGCCTATGCCAGGGAGCGCAGTATTCTCCTTCTaGGCAACAGCAGCCTGGTGG +
Preference number: 4 (lower is better)
Translates to: GQTVRRVCARRPRPMPGSAVFSF*ATAAWW
Trigger: CCACCAGGCTGCTGTTGCTCAGAAGGAGAATACTGC...GCTCCCTGGCATAGGCCTTGGCCTCCTTGCACAGACTCTCCTGACAGTCTGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR TCA 90 bp CCCAGGAGGGCAGAATGCCTGAGAAGGTCGCTGAGCCAGGCAGAGGTGAGCACACTGAAGTCGCCATCCTaGATGCTCCCCAACGACCAT +
Preference number: 4 (lower is better)
Translates to: PRRAECLRRSLSQAEVSTLKSPS*MLPNDH
Trigger: ATGGTCGTTGGGGAGCATTCAGGATGGCGACTTCAG...TGTGCTCACCTCTGCCTGGCTCAGCGACCTTCTCAGGCATTCTGCCCTCCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR TCA 90 bp GGAGGCCTGGGAGCAGACACGGTGGCATTTCCATGGAAACACAGGTGTGCAGGCAGCATGACCCCCAGCTaGAGTCGCCATCCTGAATGC +
Preference number: 4 (lower is better)
Translates to: GGLGADTVAFPWKHRCAGSMTPS*SRHPEC
Trigger: GCATTCAGGATGGCGACTTCAGCTGGGGGTCATGCT...GCCTGCACACCTGTGTTTCCATGGAAATGCCACCGTGTCTGCTCCCAGGCCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR TCA 90 bp CTCTTTCTCCATGGGCGGGTGGAGGAAAGACAGTCCGGGTGGTCTGCTCAGGAATGTTGGTGCTCAGCATaGCCCCCAGCTGAAGTCGCC +
Preference number: 4 (lower is better)
Translates to: LFLHGRVEERQSGWSAQECWCSA*PPAEVA
Trigger: GGCGACTTCAGCTGGGGGTCATGCTGAGCACCAACA...TTCCTGAGCAGACCACCCGGACTGTCTTTCCTCCACCCGCCCATGGAGAAAGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR TCA 90 bp CATGGATCAGGAACCTGTGCTGACCTAGGCAGTGCATGCTGGAGGGGACAGGAGGCTGGCTCTTCCCTCTaGGGACACTGGGTCTGGGAT +
Preference number: 4 (lower is better)
Translates to: HGSGTCADLGSACWRGQEAGSSL*GHWVWD
Trigger: ATCCCAGACCCAGTGTCCTCAGAGGGAAGAGCCAGC...CTCCTGTCCCCTCCAGCATGCACTGCCTAGGTCAGCACAGGTTCCTGATCCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR TCA 90 bp GCCATCCTGAATGCTCCCCAACGACCATGTCGCTGGTCTCTTCTCCCGTCAAGCAGAGTCCAGGTTTCCTaGCAGAGCCGCACCCCCTTC +
Preference number: 4 (lower is better)
Translates to: AILNAPQRPCRWSLLPSSRVQVS*QSRTPF
Trigger: GAAGGGGGTGCGGCTCTGTCAGGAAACCTGGACTCT...GCTTGACGGGAGAAGAGACCAGCGACATGGTCGTTGGGGAGCATTCAGGATGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR TCA 90 bp AGAGAAAAGAAGTGGCTGAAGCTGGTCCTGACTAGTGGGAGGCCTGGGAGCAGAGAGCCTCGGGTGCACTaGCCCACCCTCCAGAACCAG +
Preference number: 4 (lower is better)
Translates to: REKKWLKLVLTSGRPGSREPRVH*PTLQNQ
Trigger: CTGGTTCTGGAGGGTGGGTCAGTGCACCCGAGGCTC...TCTGCTCCCAGGCCTCCCACTAGTCAGGACCAGCTTCAGCCACTTCTTTTCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR GCA 90 bp ATGAGTGCAGCACACCCTGCTCTTCCAGAGATGCCACAAAGCCCCTTCAGGGAGAGCTCCACGATGCGCTaGTGCATGGCCCGACAGGTC +
Preference number: 4 (lower is better)
Translates to: MSAAHPALPEMPQSPFRESSTMR*CMARQV
Trigger: GACCTGTCGGGCCATGCAGCAGCGCATCGTGGAGCT...CTCCCTGAAGGGGCTTTGTGGCATCTCTGGAAGAGCAGGGTGTGCTGCACTCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000478943.5
ENST00000581396.5
CDS-3UTR GCA 90 bp AACACAGGTGTGCAGGCCGTGTGGAGCTGGGGATGTAGGAGTGGCCAGTGCCCGCATAGGTTACCGTCTTaGGCTGCTCAGCCAAGGAGT +
Preference number: 4 (lower is better)
Translates to: NTGVQAVWSWGCRSGQCPHRLPS*AAQPRS
Trigger: ACTCCTTGGCTGAGCAGCGCAAGACGGTAACCTATG...CGGGCACTGGCCACTCCTACATCCCCAGCTCCACACGGCCTGCACACCTGTGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000535933.5
ENST00000540946.5
ENST00000581396.5
CDS-3UTR GCA 90 bp AGAGGGTATCTGGAAGGAGGGCCAGTGGGGTGGATGGATGCTCTGAGCCTCGGGTCCATGACAGATGGCTaGGCAACGGGGATCCCTTCT +
Preference number: 4 (lower is better)
Translates to: RGYLEGGPVGWMDALSLGSMTDG*ATGIPS
Trigger: AGAAGGGATCCCCGTTGCGCAGCCATCTGTCATGGA...CCCGAGGCTCAGAGCATCCATCCACCCCACTGGCCCTCCTTCCAGATACCCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR GCA 90 bp GGCCTGGGAGCAGACACGGTGGCATTTCCATGGAAACACAGGTGTGCAGGCCGTATGGAAACACAGGTGTaGAGGCCGTGTGGAGCTGGG +
Preference number: 4 (lower is better)
Translates to: GLGADTVAFPWKHRCAGRMETQV*RPCGAG
Trigger: CCCAGCTCCACACGGCCTGCACACCTGTGTTTCCAT...ACGGCCTGCACACCTGTGTTTCCATGGAAATGCCACCGTGTCTGCTCCCAGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000535933.5
ENST00000540946.5
ENST00000581396.5
CDS-3UTR GCA 90 bp TGGCAGTTTGGTTTATTGGTAGTGTCGTCTCAGCAGCGTGCCACATGGCCACCAGGGGCTGGGCCACTCTaGCCGCTCTTCCTGGGAGGA +
Preference number: 4 (lower is better)
Translates to: WQFGLLVVSSQQRATWPPGAGPL*PLFLGG
Trigger: TCCTCCCAGGAAGAGCGGGCAGAGTGGCCCAGCCCC...TGGTGGCCATGTGGCACGCTGCTGAGACGACACTACCAATAAACCAAACTGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000478943.5
ENST00000581396.5
CDS-3UTR GCA 90 bp TGGCAGGGCCTCAGAGACAACCCAAGTCACAACCCAAAGGCAGCCAAAGGGCTGACAGTCCGGGTGGTCTaGTCAGGAAGCACTGCCTGG +
Preference number: 4 (lower is better)
Translates to: WQGLRDNPSHNPKAAKGLTVRVV*SGSTAW
Trigger: CCAGGCAGTGCTTCCTGAGCAGACCACCCGGACTGT...CAGCCCTTTGGCTGCCTTTGGGTTGTGACTTGGGTTGTCTCTGAGGCCCTGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR GCA 90 bp AGCCTGGGCTGGCAGCTGAATGATGGAGAGAGGGTCAAGAAGGTGAGAGACCCCCCCAGGAGGGCAGAATaGCTGAGAAGGTCGCTGAGC +
Preference number: 4 (lower is better)
Translates to: SLGWQLNDGERVKKVRDPPRRAE*LRRSLS
Trigger: GCTCAGCGACCTTCTCAGGCATTCTGCCCTCCTGGG...GGGGTCTCTCACCTTCTTGACCCTCTCTCCATCATTCAGCTGCCAGCCCAGGCT
60% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 4 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000478943.5
ENST00000581396.5
CDS-3UTR GCA 90 bp TGGGAGCAGACACGGTGGCATTTCCATGGAAACACAGGTGTGCAGGCCGTGTGGGACCAGGCCCATGAGTaGAGCACACCCTGCTCTTCC +
Preference number: 4 (lower is better)
Translates to: WEQTRWHFHGNTGVQAVWDQAHE*STPCSS
Trigger: GGAAGAGCAGGGTGTGCTGCACTCATGGGCCTGGTC...CCACACGGCCTGCACACCTGTGTTTCCATGGAAATGCCACCGTGTCTGCTCCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000478943.5
ENST00000581396.5
CDS-3UTR GCA 90 bp ATGGAAACACAGGTGTGCAGGCCGTGTGGAGCTGGGGATGTAGGAGTGGCCAGTGACCAGGCCCATGAGTaGAGCACACCCTGCTCTTCC +
Preference number: 4 (lower is better)
Translates to: METQVCRPCGAGDVGVASDQAHE*STPCSS
Trigger: GGAAGAGCAGGGTGTGCTGCACTCATGGGCCTGGTC...ACTGGCCACTCCTACATCCCCAGCTCCACACGGCCTGCACACCTGTGTTTCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000478943.5
ENST00000581396.5
CDS-3UTR GCA 90 bp GTTTGGTTTATTGGTAGTGTCGTCTCAGCAGCGTGCCACATGGCCACCATCTGCTGCAGGGACCCTCGGTaGCAGGCTCGGCTGCTGAGC +
Preference number: 4 (lower is better)
Translates to: VWFIGSVVSAACHMATICCRDPR*QARLLS
Trigger: GCTCAGCAGCCGAGCCTGGCACCGAGGGTCCCTGCA...GCAGATGGTGGCCATGTGGCACGCTGCTGAGACGACACTACCAATAAACCAAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000478943.5
ENST00000581396.5
CDS-3UTR GCA 90 bp AACACAGGTGTGCAGGCCGTGTGGAGCTGGGGATGTAGGAGTGGCCAGTGCCCGGAGCAATACCTCCAGTaGAAGTCCCTCCACAAGCCA +
Preference number: 4 (lower is better)
Translates to: NTGVQAVWSWGCRSGQCPEQYLQ*KSLHKP
Trigger: TGGCTTGTGGAGGGACTTGCACTGGAGGTATTGCTC...CGGGCACTGGCCACTCCTACATCCCCAGCTCCACACGGCCTGCACACCTGTGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR GCA 90 bp GGGGCCGGGCGTGCTCTTTCTCCATGGGCGGGTGGAGGAAAGACAGTCCGGGTGCAAGACACACGGGGATaGATACAGCTGCAGTATTCT +
Preference number: 4 (lower is better)
Translates to: GAGRALSPWAGGGKTVRVQDTRG*IQLQYS
Trigger: AGAATACTGCAGCTGTATGCATCCCCGTGTGTCTTG...CACCCGGACTGTCTTTCCTCCACCCGCCCATGGAGAAAGAGCACGCCCGGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR GCA 90 bp TGGCATTTCCATGGAAACACAGGTGTGCAGGCCGTGTGGAGCTGGGGATGTAGGGGCAGGTGTGGCATGTaGTGCCAGAGAGGACAGGGC +
Preference number: 4 (lower is better)
Translates to: WHFHGNTGVQAVWSWGCRGRCGM*CQRGQG
Trigger: GCCCTGTCCTCTCTGGCAGCACATGCCACACCTGCC...CCTACATCCCCAGCTCCACACGGCCTGCACACCTGTGTTTCCATGGAAATGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR GCA 90 bp AGCCTGGGCTGGCAGCTGAATGATGGAGAGAGGGTCAAGAAGGTGAGAGACCCCACACTGGGTCTGGGATaGAGTGCTGAGGCTGCGGAG +
Preference number: 4 (lower is better)
Translates to: SLGWQLNDGERVKKVRDPTLGLG*SAEAAE
Trigger: CTCCGCAGCCTCAGCACTGCATCCCAGACCCAGTGT...GGGGTCTCTCACCTTCTTGACCCTCTCTCCATCATTCAGCTGCCAGCCCAGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR GCA 90 bp GAGGTGCAAGCAGGCCACCTGAGGGGTGGCTCCAGGCTAGGAAGGCAGGTGACAGCACTATGGAATCCCTaGTCCTTTCAGAGCCTCCAG +
Preference number: 4 (lower is better)
Translates to: EVQAGHLRGGSRLGRQVTALWNP*SFQSLQ
Trigger: CTGGAGGCTCTGAAAGGAGCAGGGATTCCATAGTGC...TGTCACCTGCCTTCCTAGCCTGGAGCCACCCCTCAGGTGGCCTGCTTGCACCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR GCA 90 bp AGACACGGTGGCATTTCCATGGAAACACAGGTGTGCAGGCCGTGTGGAGCTGGGTGGCCAATGGCCTCCTaGCAGCCCATACAGGTCCAC +
Preference number: 4 (lower is better)
Translates to: RHGGISMETQVCRPCGAGWPMAS*QPIQVH
Trigger: GTGGACCTGTATGGGCTGGCAGGAGGCCATTGGCCA...CCCAGCTCCACACGGCCTGCACACCTGTGTTTCCATGGAAATGCCACCGTGTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR GCA 90 bp CTCAGAGAAAAGAAGTGGCTGAAGCTGGTCCTGACTAGTGGGAGGCCTGGGAGCAGCAAGAGCCCCCTCTaGCTACAGGTGGGGCAGGCT +
Preference number: 4 (lower is better)
Translates to: LREKKWLKLVLTSGRPGSSKSPL*LQVGQA
Trigger: AGCCTGCCCCACCTGTAGGCAGAGGGGGCTCTTGCT...GCTCCCAGGCCTCCCACTAGTCAGGACCAGCTTCAGCCACTTCTTTTCTCTGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR GCA 90 bp TGGGAGCAGACACGGTGGCATTTCCATGGAAACACAGGTGTGCAGGCCGTGTGGAGATGGCCTGCTCAGTaGCTGGAGACTGCCCAGGCA +
Preference number: 4 (lower is better)
Translates to: WEQTRWHFHGNTGVQAVWRWPAQ*LETAQA
Trigger: TGCCTGGGCAGTCTCCAGGCACTGAGCAGGCCATCT...CCACACGGCCTGCACACCTGTGTTTCCATGGAAATGCCACCGTGTCTGCTCCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR GCA 90 bp AGGGGAGAGAGTCTCTGGCTGCAGTTGTCCCACCACTCAGAGAAAAGAAGTGGCGCCATGTGGAGCCCTTaGCCCAACTCTCCGGGCTGG +
Preference number: 4 (lower is better)
Translates to: RGESLWLQLSHHSEKRSGAMWSP*PNSPGW
Trigger: CCAGCCCGGAGAGTTGGGGCAAGGGCTCCACATGGC...GCCACTTCTTTTCTCTGAGTGGTGGGACAACTGCAGCCAGAGACTCTCTCCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR GCA 90 bp TGGGAGCAGACACGGTGGCATTTCCATGGAAACACAGGTGTGCAGGCCGTGTGGAGCATCGGCAGCAGCTaGCCTGCGAGCATCTGTTGC +
Preference number: 4 (lower is better)
Translates to: WEQTRWHFHGNTGVQAVWSIGSS*PASICC
Trigger: GCAACAGATGCTCGCAGGGCAGCTGCTGCCGATGCT...CCACACGGCCTGCACACCTGTGTTTCCATGGAAATGCCACCGTGTCTGCTCCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR CCA 90 bp AGGGCGGGGCCGGGCGTGCTCTTTCTCCATGGGCGGGTGGAGGAAAGACAGTCCACTTCAGGGACACTCTaGATCAGAGCAAGCACTTTG +
Preference number: 4 (lower is better)
Translates to: RAGPGVLFLHGRVEERQSTSGTL*IRASTL
Trigger: CAAAGTGCTTGCTCTGATCCAGAGTGTCCCTGAAGT...GGACTGTCTTTCCTCCACCCGCCCATGGAGAAAGAGCACGCCCGGCCCCGCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318094.14
CDS-3UTR CCA 90 bp AGGCCTGGGAGCAGACACGGTGGCATTTCCATGGAAACACAGGTGTGCAGGCCGGGGCATGGTCGCAGCTaGATCCACTTCAGGGACACT +
Preference number: 4 (lower is better)
Translates to: RPGSRHGGISMETQVCRPGHGRS*IHFRDT
Trigger: AGTGTCCCTGAAGTGGATCCAGCTGCGACCATGCCC...CGGCCTGCACACCTGTGTTTCCATGGAAATGCCACCGTGTCTGCTCCCAGGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000581396.5
CDS-3UTR CCA 90 bp CTGAATGCTCCCCAACGACCATGTCGCTGGTCTCTTCTCCCGTCAAGCCCAGCCGGGCATGGTCGCAGCTaGATCCACTTCAGGGACACT +
Preference number: 4 (lower is better)
Translates to: LNAPQRPCRWSLLPSSPAGHGRS*IHFRDT
Trigger: AGTGTCCCTGAAGTGGATCCAGCTGCGACCATGCCC...GGCTGGGCTTGACGGGAGAAGAGACCAGCGACATGGTCGTTGGGGAGCATTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR CCA 90 bp AGTGGGAGGCCTGGGAGCAGACACGGTGGCATTTCCATGGAAACACAGGTGTGCAGTCACACTCAGAGCTaGGGCCTGCGGTGCGGAGTA +
Preference number: 4 (lower is better)
Translates to: SGRPGSRHGGISMETQVCSHTQS*GLRCGV
Trigger: TACTCCGCACCGCAGGCCCCAGCTCTGAGTGTGACT...GCACACCTGTGTTTCCATGGAAATGCCACCGTGTCTGCTCCCAGGCCTCCCACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000581396.5
CDS-3UTR CCA 90 bp TGGGAGCAGACACGGTGGCATTTCCATGGAAACACAGGTGTGCAGGCCGTGTGGAGTCACACTCAGAGCTaGGGCCTGCGGTGCGGAGTA +
Preference number: 4 (lower is better)
Translates to: WEQTRWHFHGNTGVQAVWSHTQS*GLRCGV
Trigger: TACTCCGCACCGCAGGCCCCAGCTCTGAGTGTGACT...CCACACGGCCTGCACACCTGTGTTTCCATGGAAATGCCACCGTGTCTGCTCCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000581396.5
CDS-3UTR CCA 90 bp CAGACACGGTGGCATTTCCATGGAAACACAGGTGTGCAGGCCGTGTGGAGCTGGAGTCACACTCAGAGCTaGGGCCTGCGGTGCGGAGTA +
Preference number: 4 (lower is better)
Translates to: QTRWHFHGNTGVQAVWSWSHTQS*GLRCGV
Trigger: TACTCCGCACCGCAGGCCCCAGCTCTGAGTGTGACT...CCAGCTCCACACGGCCTGCACACCTGTGTTTCCATGGAAATGCCACCGTGTCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000581396.5
CDS-3UTR CCA 90 bp AGGCCTGGGAGCAGACACGGTGGCATTTCCATGGAAACACAGGTGTGCAGGCCGTGTGTTCCCCACCATTaGGCTCACCACGGCTGGAGA +
Preference number: 4 (lower is better)
Translates to: RPGSRHGGISMETQVCRPCVPHH*AHHGWR
Trigger: TCTCCAGCCGTGGTGAGCCCAATGGTGGGGAACACA...CGGCCTGCACACCTGTGTTTCCATGGAAATGCCACCGTGTCTGCTCCCAGGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000535933.5
ENST00000540946.5
ENST00000581396.5
CDS-3UTR CCA 90 bp CCCATGCACGCTGGTAAGCGAGCCAGTCATTCTCTCAGCCTGGCCACAGATGGCTGTGTTCCCCACCATTaGGCTCACCACGGCTGGAGA +
Preference number: 4 (lower is better)
Translates to: PMHAGKRASHSLSLATDGCVPHH*AHHGWR
Trigger: TCTCCAGCCGTGGTGAGCCCAATGGTGGGGAACACA...GCCATCTGTGGCCAGGCTGAGAGAATGACTGGCTCGCTTACCAGCGTGCATGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR CCA 90 bp GGCATTTCCATGGAAACACAGGTGTGCAGGCCGTGTGGAGCTGGGGATGTAGGAGGAGGAGAGGGAAGATaGGGGCGCTGTGTTCCCCAC +
Preference number: 4 (lower is better)
Translates to: GISMETQVCRPCGAGDVGGGEGR*GRCVPH
Trigger: GTGGGGAACACAGCGCCCCCATCTTCCCTCTCCTCC...TCCTACATCCCCAGCTCCACACGGCCTGCACACCTGTGTTTCCATGGAAATGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000535933.5
ENST00000540946.5
ENST00000581396.5
CDS-3UTR CCA 90 bp CAGGTGTGCAGGCCGTGTGGAGCTGGGGATGTAGGAGTGGCCAGTGCCCGGTGTGAGTTTCCTCTCGTCTaGGCAAACATGTCAAAGCCG +
Preference number: 4 (lower is better)
Translates to: QVCRPCGAGDVGVASARCEFPLV*ANMSKP
Trigger: CGGCTTTGACATGTTTGCCCAGACGAGAGGAAACTC...ACACCGGGCACTGGCCACTCCTACATCCCCAGCTCCACACGGCCTGCACACCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000535933.5
ENST00000540946.5
ENST00000581396.5
CDS-3UTR CCA 90 bp TGGCAGGGCCTCAGAGACAACCCAAGTCACAACCCAAAGGCAGCCAAAGGGCTGGTCGTCCATGACAGATaGCTGCGCAACGGGGATCCC +
Preference number: 4 (lower is better)
Translates to: WQGLRDNPSHNPKAAKGLVVHDR*LRNGDP
Trigger: GGGATCCCCGTTGCGCAGCCATCTGTCATGGACGAC...CAGCCCTTTGGCTGCCTTTGGGTTGTGACTTGGGTTGTCTCTGAGGCCCTGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR CCA 90 bp AGCCTGGGCTGGCAGCTGAATGATGGAGAGAGGGTCAAGAAGGTGAGAGACCCCGTCGTCCATGACAGATaGCTGCGCAACGGGGATCCC +
Preference number: 4 (lower is better)
Translates to: SLGWQLNDGERVKKVRDPVVHDR*LRNGDP
Trigger: GGGATCCCCGTTGCGCAGCCATCTGTCATGGACGAC...GGGGTCTCTCACCTTCTTGACCCTCTCTCCATCATTCAGCTGCCAGCCCAGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000478943.5
ENST00000581396.5
CDS-3UTR CCA 90 bp AGACACGGTGGCATTTCCATGGAAACACAGGTGTGCAGGCCGTGTGGAGCTGGGGGTGTGCAGGCCGTGTaGAGCTGGGGATGTAGGAGT +
Preference number: 4 (lower is better)
Translates to: RHGGISMETQVCRPCGAGGVQAV*SWGCRS
Trigger: ACTCCTACATCCCCAGCTCCACACGGCCTGCACACC...CCCAGCTCCACACGGCCTGCACACCTGTGTTTCCATGGAAATGCCACCGTGTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000535933.5
ENST00000540946.5
ENST00000581396.5
CDS-3UTR CCA 90 bp GGAGGCCTGGGAGCAGACACGGTGGCATTTCCATGGAAACACAGGTGTGCAGGCTCTGCCCGCTCTTCCTaGGAGGAAACATGGGCAGAG +
Preference number: 4 (lower is better)
Translates to: GGLGADTVAFPWKHRCAGSARSS*EETWAE
Trigger: CTCTGCCCATGTTTCCTCCCAGGAAGAGCGGGCAGA...GCCTGCACACCTGTGTTTCCATGGAAATGCCACCGTGTCTGCTCCCAGGCCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000581396.5
CDS-3UTR CCA 90 bp CTGAATGCTCCCCAACGACCATGTCGCTGGTCTCTTCTCCCGTCAAGCCCAGCCTCTGCCCGCTCTTCCTaGGAGGAAACATGGGCAGAG +
Preference number: 4 (lower is better)
Translates to: LNAPQRPCRWSLLPSSPASARSS*EETWAE
Trigger: CTCTGCCCATGTTTCCTCCCAGGAAGAGCGGGCAGA...GGCTGGGCTTGACGGGAGAAGAGACCAGCGACATGGTCGTTGGGGAGCATTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR CCA 90 bp CATGGAAACACAGGTGTGCAGGCCGTGTGGAGCTGGGGATGTAGGAGTGGCCAGTCTGCCCGCTCTTCCTaGGAGGAAACATGGGCAGAG +
Preference number: 4 (lower is better)
Translates to: HGNTGVQAVWSWGCRSGQSARSS*EETWAE
Trigger: CTCTGCCCATGTTTCCTCCCAGGAAGAGCGGGCAGA...CTGGCCACTCCTACATCCCCAGCTCCACACGGCCTGCACACCTGTGTTTCCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000581396.5
CDS-3UTR CCA 90 bp GGAGGGGAGAGAGTCTCTGGCTGCAGTTGTCCCACCACTCAGAGAAAAGAAGTGTCAGGAAGCACTGCCTaGGGCTGGGCCACTCTGCCC +
Preference number: 4 (lower is better)
Translates to: GGERVSGCSCPTTQRKEVSGSTA*GWATLP
Trigger: GGGCAGAGTGGCCCAGCCCCAGGCAGTGCTTCCTGA...CACTTCTTTTCTCTGAGTGGTGGGACAACTGCAGCCAGAGACTCTCTCCCCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000478943.5
ENST00000581396.5
CDS-3UTR CCA 90 bp CATGGAAACACAGGTGTGCAGGCCGTGTGGAGCTGGGGATGTAGGAGTGGCCAGAGAGGACCTCTGAGGTaGGAGGAGGCCAGACTGTCA +
Preference number: 4 (lower is better)
Translates to: HGNTGVQAVWSWGCRSGQRGPLR*EEARLS
Trigger: TGACAGTCTGGCCTCCTCCCACCTCAGAGGTCCTCT...CTGGCCACTCCTACATCCCCAGCTCCACACGGCCTGCACACCTGTGTTTCCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR CCA 90 bp GGAGGCCTGGGAGCAGACACGGTGGCATTTCCATGGAAACACAGGTGTGCAGGCAGAGGACCTCTGAGGTaGGAGGAGGCCAGACTGTCA +
Preference number: 4 (lower is better)
Translates to: GGLGADTVAFPWKHRCAGRGPLR*EEARLS
Trigger: TGACAGTCTGGCCTCCTCCCACCTCAGAGGTCCTCT...GCCTGCACACCTGTGTTTCCATGGAAATGCCACCGTGTCTGCTCCCAGGCCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR CCA 90 bp ATGAGTGCAGCACACCCTGCTCTTCCAGAGATGCCACAAAGCCCCTTCAGGGAGGCCTCTGGGTGCACCTaGGCCATCCCAGCCACCTTT +
Preference number: 4 (lower is better)
Translates to: MSAAHPALPEMPQSPFREASGCT*AIPATF
Trigger: AAAGGTGGCTGGGATGGCCCAGGTGCACCCAGAGGC...CTCCCTGAAGGGGCTTTGTGGCATCTCTGGAAGAGCAGGGTGTGCTGCACTCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR CCA 90 bp TGGCAGTTTGGTTTATTGGTAGTGTCGTCTCAGCAGCGTGCCACATGGCCACCAAAGGGCTGGGGCCTCTaGGTGCACCTGGGCCATCCC +
Preference number: 4 (lower is better)
Translates to: WQFGLLVVSSQQRATWPPKGWGL*VHLGHP
Trigger: GGGATGGCCCAGGTGCACCCAGAGGCCCCAGCCCTT...TGGTGGCCATGTGGCACGCTGCTGAGACGACACTACCAATAAACCAAACTGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR CCA 90 bp GTTTGGTTTATTGGTAGTGTCGTCTCAGCAGCGTGCCACATGGCCACCATCTGCAGCTGGCGCTGGCGCTaGAGCTGGAGCGGGGCAGTT +
Preference number: 4 (lower is better)
Translates to: VWFIGSVVSAACHMATICSWRWR*SWSGAV
Trigger: AACTGCCCCGCTCCAGCTCCAGCGCCAGCGCCAGCT...GCAGATGGTGGCCATGTGGCACGCTGCTGAGACGACACTACCAATAAACCAAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR CCA 90 bp TGGCAGGGCCTCAGAGACAACCCAAGTCACAACCCAAAGGCAGCCAAAGGGCTGGTGCTCCCCAGATGGTaGGGTCTGGGAGCAGAGATC +
Preference number: 4 (lower is better)
Translates to: WQGLRDNPSHNPKAAKGLVLPRW*GLGAEI
Trigger: GATCTCTGCTCCCAGACCCCACCATCTGGGGAGCAC...CAGCCCTTTGGCTGCCTTTGGGTTGTGACTTGGGTTGTCTCTGAGGCCCTGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR CCA 90 bp GTGGGAGGGGAGAGAGTCTCTGGCTGCAGTTGTCCCACCACTCAGAGAAAAGAAGCCGCACCCCCTTCCTaGACCAGGCAGCCTAAGGAC +
Preference number: 4 (lower is better)
Translates to: VGGERVSGCSCPTTQRKEAAPPS*TRQPKD
Trigger: GTCCTTAGGCTGCCTGGTCCAGGAAGGGGGTGCGGC...TTCTTTTCTCTGAGTGGTGGGACAACTGCAGCCAGAGACTCTCTCCCCTCCCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR CCA 90 bp CCCAGGAGGGCAGAATGCCTGAGAAGGTCGCTGAGCCAGGCAGAGGTGAGCACAAGGAGGACAGACGGATaGTCACCTTTCCCTCTAGCC +
Preference number: 4 (lower is better)
Translates to: PRRAECLRRSLSQAEVSTRRTDG*SPFPLA
Trigger: GGCTAGAGGGAAAGGTGACCATCCGTCTGTCCTCCT...TGTGCTCACCTCTGCCTGGCTCAGCGACCTTCTCAGGCATTCTGCCCTCCTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR CCA 90 bp CCTGGCACAGGGTCCTGGGTCGGGCAGCACTTGCTCTTCACTGGAATAGTTCCTGGCATGGTGGGGTGGTaGGGGAAGGCTAGTGAACCA +
Preference number: 4 (lower is better)
Translates to: PGTGSWVGQHLLFTGIVPGMVGW*GKASEP
Trigger: TGGTTCACTAGCCTTCCCCCACCACCCCACCATGCC...AGGAACTATTCCAGTGAAGAGCAAGTGCTGCCCGACCCAGGACCCTGTGCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR CCA 90 bp GGCCTGGGAGCAGACACGGTGGCATTTCCATGGAAACACAGGTGTGCAGGCCGTAGCATCTGTTGCCCTTaGGCCATGTGGAGCCCTTGC +
Preference number: 4 (lower is better)
Translates to: GLGADTVAFPWKHRCAGRSICCP*AMWSPC
Trigger: GCAAGGGCTCCACATGGCCCAAGGGCAACAGATGCT...ACGGCCTGCACACCTGTGTTTCCATGGAAATGCCACCGTGTCTGCTCCCAGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR CCA 90 bp GAAAAGAAGTGGCTGAAGCTGGTCCTGACTAGTGGGAGGCCTGGGAGCAGACACGGAGGGCCAGTGGGGTaGATGGATGCTCTGAGCCTC +
Preference number: 4 (lower is better)
Translates to: EKKWLKLVLTSGRPGSRHGGPVG*MDALSL
Trigger: GAGGCTCAGAGCATCCATCCACCCCACTGGCCCTCC...GTGTCTGCTCCCAGGCCTCCCACTAGTCAGGACCAGCTTCAGCCACTTCTTTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR CCA 90 bp CTCAGAGAAAAGAAGTGGCTGAAGCTGGTCCTGACTAGTGGGAGGCCTGGGAGCGGAGGGCCAGTGGGGTaGATGGATGCTCTGAGCCTC +
Preference number: 4 (lower is better)
Translates to: LREKKWLKLVLTSGRPGSGGPVG*MDALSL
Trigger: GAGGCTCAGAGCATCCATCCACCCCACTGGCCCTCC...GCTCCCAGGCCTCCCACTAGTCAGGACCAGCTTCAGCCACTTCTTTTCTCTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR TCA 90 bp ATGAGTGCAGCACACCCTGCTCTTCCAGAGATGCCACAAAGCCCCTTCAGGGAGAGTTCCGGTTCCCGTTaGGCCGCTTCTTCAGGGCTC +
Preference number: 4 (lower is better)
Translates to: MSAAHPALPEMPQSPFRESSGSR*AASSGL
Trigger: GAGCCCTGAAGAAGCGGCTCAACGGGAACCGGAACT...CTCCCTGAAGGGGCTTTGTGGCATCTCTGGAAGAGCAGGGTGTGCTGCACTCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000581396.5
CDS-3UTR TCA 90 bp TGGCATTTCCATGGAAACACAGGTGTGCAGGCCGTGTGGAGCTGGGGATGTAGGCCCGACAGGTCCTGTTaGGCTCCTGCAGCAACTCCA +
Preference number: 4 (lower is better)
Translates to: WHFHGNTGVQAVWSWGCRPDRSC*APAATP
Trigger: TGGAGTTGCTGCAGGAGCTCAACAGGACCTGTCGGG...CCTACATCCCCAGCTCCACACGGCCTGCACACCTGTGTTTCCATGGAAATGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000535933.5
ENST00000540946.5
ENST00000581396.5
CDS-3UTR TCA 90 bp AGGGGAGAGAGTCTCTGGCTGCAGTTGTCCCACCACTCAGAGAAAAGAAGTGGCGCAGCAGCTCCTCGGTaGCCTCCTCATTGGACACGC +
Preference number: 4 (lower is better)
Translates to: RGESLWLQLSHHSEKRSGAAAPR*PPHWTR
Trigger: GCGTGTCCAATGAGGAGGTCACCGAGGAGCTGCTGC...GCCACTTCTTTTCTCTGAGTGGTGGGACAACTGCAGCCAGAGACTCTCTCCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000581396.5
CDS-3UTR TCA 90 bp TGGGAGCAGACACGGTGGCATTTCCATGGAAACACAGGTGTGCAGGCCGTGTGGCCTCAATGTCGTCCATaGCAGATGGCTGCGCAACGG +
Preference number: 4 (lower is better)
Translates to: WEQTRWHFHGNTGVQAVWPQCRP*QMAAQR
Trigger: CCGTTGCGCAGCCATCTGTCATGGACGACATTGAGG...CCACACGGCCTGCACACCTGTGTTTCCATGGAAATGCCACCGTGTCTGCTCCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000535933.5
ENST00000581396.5
CDS-3UTR TCA 90 bp CTCTTTCTCCATGGGCGGGTGGAGGAAAGACAGTCCGGGTGGTCTGCTCAGGAACCTCAATGTCGTCCATaGCAGATGGCTGCGCAACGG +
Preference number: 4 (lower is better)
Translates to: LFLHGRVEERQSGWSAQEPQCRP*QMAAQR
Trigger: CCGTTGCGCAGCCATCTGTCATGGACGACATTGAGG...TTCCTGAGCAGACCACCCGGACTGTCTTTCCTCCACCCGCCCATGGAGAAAGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000478943.5
ENST00000581396.5
CDS-3UTR TCA 90 bp ATGGAAACACAGGTGTGCAGGCCGTGTGGAGCTGGGGATGTAGGAGTGGCCAGTCCTCAATGTCGTCCATaGCAGATGGCTGCGCAACGG +
Preference number: 4 (lower is better)
Translates to: METQVCRPCGAGDVGVASPQCRP*QMAAQR
Trigger: CCGTTGCGCAGCCATCTGTCATGGACGACATTGAGG...ACTGGCCACTCCTACATCCCCAGCTCCACACGGCCTGCACACCTGTGTTTCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000535933.5
ENST00000581396.5
CDS-3UTR TCA 90 bp CTGGGCTGGCAGCTGAATGATGGAGAGAGGGTCAAGAAGGTGAGAGACCCCCACCCTCAATGTCGTCCATaGCAGATGGCTGCGCAACGG +
Preference number: 4 (lower is better)
Translates to: LGWQLNDGERVKKVRDPHPQCRP*QMAAQR
Trigger: CCGTTGCGCAGCCATCTGTCATGGACGACATTGAGG...GTGGGGGTCTCTCACCTTCTTGACCCTCTCTCCATCATTCAGCTGCCAGCCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000478943.5
ENST00000581396.5
CDS-3UTR TCA 90 bp AGACACGGTGGCATTTCCATGGAAACACAGGTGTGCAGGCCGTGTGGAGCTGGGCCTTCAGGTCGGTCCTaGGCCACACCTCAATGTCGT +
Preference number: 4 (lower is better)
Translates to: RHGGISMETQVCRPCGAGPSGRS*ATPQCR
Trigger: ACGACATTGAGGTGTGGCTCAGGACCGACCTGAAGG...CCCAGCTCCACACGGCCTGCACACCTGTGTTTCCATGGAAATGCCACCGTGTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000535933.5
ENST00000581396.5
CDS-3UTR TCA 90 bp AGCCTGGGCTGGCAGCTGAATGATGGAGAGAGGGTCAAGAAGGTGAGAGACCCCCCTTCAGGTCGGTCCTaGGCCACACCTCAATGTCGT +
Preference number: 4 (lower is better)
Translates to: SLGWQLNDGERVKKVRDPPSGRS*ATPQCR
Trigger: ACGACATTGAGGTGTGGCTCAGGACCGACCTGAAGG...GGGGTCTCTCACCTTCTTGACCCTCTCTCCATCATTCAGCTGCCAGCCCAGGCT
59% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000478943.5
ENST00000581396.5
CDS-3UTR TCA 90 bp CCTGGGAGCAGACACGGTGGCATTTCCATGGAAACACAGGTGTGCAGGCCGTGTCCTTCAGGTCGGTCCTaGGCCACACCTCAATGTCGT +
Preference number: 4 (lower is better)
Translates to: PGSRHGGISMETQVCRPCPSGRS*ATPQCR
Trigger: ACGACATTGAGGTGTGGCTCAGGACCGACCTGAAGG...ACACGGCCTGCACACCTGTGTTTCCATGGAAATGCCACCGTGTCTGCTCCCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000535933.5
ENST00000581396.5
CDS-3UTR TCA 90 bp CAGGTGTGCAGGCCGTGTGGAGCTGGGGATGTAGGAGTGGCCAGTGCCCGGTGTCAAACTCTTCACTTGTaGCACCCTCCTCCAGATCAT +
Preference number: 4 (lower is better)
Translates to: QVCRPCGAGDVGVASARCQTLHL*HPPPDH
Trigger: ATGATCTGGAGGAGGGTGTCACAAGTGAAGAGTTTG...ACACCGGGCACTGGCCACTCCTACATCCCCAGCTCCACACGGCCTGCACACCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000535933.5
ENST00000540946.5
ENST00000581396.5
CDS-3UTR TCA 90 bp AGCAGACACGGTGGCATTTCCATGGAAACACAGGTGTGCAGGCCGTGTGGAGCTGAAGAGGGCATCCTCTaGCCGCTCTGGCTTCTTCCG +
Preference number: 4 (lower is better)
Translates to: SRHGGISMETQVCRPCGAEEGIL*PLWLLP
Trigger: CGGAAGAAGCCAGAGCGGTCAGAGGATGCCCTCTTC...AGCTCCACACGGCCTGCACACCTGTGTTTCCATGGAAATGCCACCGTGTCTGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000535933.5
ENST00000540946.5
ENST00000581396.5
CDS-3UTR TCA 90 bp GAAAAGAAGTGGCTGAAGCTGGTCCTGACTAGTGGGAGGCCTGGGAGCAGACACGAAGAGGGCATCCTCTaGCCGCTCTGGCTTCTTCCG +
Preference number: 4 (lower is better)
Translates to: EKKWLKLVLTSGRPGSRHEEGIL*PLWLLP
Trigger: CGGAAGAAGCCAGAGCGGTCAGAGGATGCCCTCTTC...GTGTCTGCTCCCAGGCCTCCCACTAGTCAGGACCAGCTTCAGCCACTTCTTTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000535933.5
ENST00000581396.5
CDS-3UTR TCA 90 bp GCCATCCTGAATGCTCCCCAACGACCATGTCGCTGGTCTCTTCTCCCGTCAAGCGACAAGTCCAAGGAGTaGGACCAGGCCCATGAGTGC +
Preference number: 4 (lower is better)
Translates to: AILNAPQRPCRWSLLPSSDKSKE*DQAHEC
Trigger: GCACTCATGGGCCTGGTCTCACTCCTTGGACTTGTC...GCTTGACGGGAGAAGAGACCAGCGACATGGTCGTTGGGGAGCATTCAGGATGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR TCA 90 bp CTGGGCTGGCAGCTGAATGATGGAGAGAGGGTCAAGAAGGTGAGAGACCCCCACAGAGGGTCAAGAAGGTaGGAGACCCCCACCATGGAG +
Preference number: 4 (lower is better)
Translates to: LGWQLNDGERVKKVRDPHRGSRR*ETPTME
Trigger: CTCCATGGTGGGGGTCTCTCACCTTCTTGACCCTCT...GTGGGGGTCTCTCACCTTCTTGACCCTCTCTCCATCATTCAGCTGCCAGCCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000478943.5
ENST00000581396.5
CDS-3UTR TCA 90 bp CATGGATCAGGAACCTGTGCTGACCTAGGCAGTGCATGCTGGAGGGGACAGGAGAGAGGGTCAAGAAGGTaGGAGACCCCCACCATGGAG +
Preference number: 4 (lower is better)
Translates to: HGSGTCADLGSACWRGQERGSRR*ETPTME
Trigger: CTCCATGGTGGGGGTCTCTCACCTTCTTGACCCTCT...CTCCTGTCCCCTCCAGCATGCACTGCCTAGGTCAGCACAGGTTCCTGATCCATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR TCA 90 bp AGGCCTGGGAGCAGACACGGTGGCATTTCCATGGAAACACAGGTGTGCAGGCCGTGTGCACAACGCCGGTaGGATCAGGACTGCTTCGAA +
Preference number: 4 (lower is better)
Translates to: RPGSRHGGISMETQVCRPCAQRR*DQDCFE
Trigger: TTCGAAGCAGTCCTGATCTCACCGGCGTTGTGCACA...CGGCCTGCACACCTGTGTTTCCATGGAAATGCCACCGTGTCTGCTCCCAGGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379504.8
ENST00000535933.5
ENST00000581396.5
CDS-3UTR TCA 90 bp AGGCCTGGGAGCAGACACGGTGGCATTTCCATGGAAACACAGGTGTGCAGGCCGGCAGTATTCTCCTTCTaGGCAACAGCAGCCTGGTGG +
Preference number: 4 (lower is better)
Translates to: RPGSRHGGISMETQVCRPAVFSF*ATAAWW
Trigger: CCACCAGGCTGCTGTTGCTCAGAAGGAGAATACTGC...CGGCCTGCACACCTGTGTTTCCATGGAAATGCCACCGTGTCTGCTCCCAGGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR TCA 90 bp CTGGGCTGGCAGCTGAATGATGGAGAGAGGGTCAAGAAGGTGAGAGACCCCCACCCTGAGCAACTGGAGTaGGACATCCCAGCTAGTCCC +
Preference number: 4 (lower is better)
Translates to: LGWQLNDGERVKKVRDPHPEQLE*DIPASP
Trigger: GGGACTAGCTGGGATGTCTCACTCCAGTTGCTCAGG...GTGGGGGTCTCTCACCTTCTTGACCCTCTCTCCATCATTCAGCTGCCAGCCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR TCA 90 bp GCCATCCTGAATGCTCCCCAACGACCATGTCGCTGGTCTCTTCTCCCGTCAAGCTGTAACCCAAGTGGGTaGGACGTCCCCAAAGCCGAC +
Preference number: 4 (lower is better)
Translates to: AILNAPQRPCRWSLLPSSCNPSG*DVPKAD
Trigger: GTCGGCTTTGGGGACGTCTCACCCACTTGGGTTACA...GCTTGACGGGAGAAGAGACCAGCGACATGGTCGTTGGGGAGCATTCAGGATGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR TCA 90 bp CATGGATCAGGAACCTGTGCTGACCTAGGCAGTGCATGCTGGAGGGGACAGGAGTGTAACCCAAGTGGGTaGGACGTCCCCAAAGCCGAC +
Preference number: 4 (lower is better)
Translates to: HGSGTCADLGSACWRGQECNPSG*DVPKAD
Trigger: GTCGGCTTTGGGGACGTCTCACCCACTTGGGTTACA...CTCCTGTCCCCTCCAGCATGCACTGCCTAGGTCAGCACAGGTTCCTGATCCATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR TCA 90 bp AGGGCGGGGCCGGGCGTGCTCTTTCTCCATGGGCGGGTGGAGGAAAGACAGTCCAGCCCCCAACAATCCTaGGAATCCTCACAATTAAGT +
Preference number: 4 (lower is better)
Translates to: RAGPGVLFLHGRVEERQSSPQQS*ESSQLS
Trigger: ACTTAATTGTGAGGATTCTCAGGATTGTTGGGGGCT...GGACTGTCTTTCCTCCACCCGCCCATGGAGAAAGAGCACGCCCGGCCCCGCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR TCA 90 bp CCTGGGAGCAGACACGGTGGCATTTCCATGGAAACACAGGTGTGCAGGCCGTGTCCCGACAGGTCCTGTTaGGCTCCTAGGGAACACATG +
Preference number: 4 (lower is better)
Translates to: PGSRHGGISMETQVCRPCPDRSC*APREHM
Trigger: CATGTGTTCCCTAGGAGCTCAACAGGACCTGTCGGG...ACACGGCCTGCACACCTGTGTTTCCATGGAAATGCCACCGTGTCTGCTCCCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478943.5
CDS-3UTR GCA 90 bp CTGGGAGCAGACACGGTGGCATTTCCATGGAAACACAGGTGTGCAGGCCGTGTGCAGGGAGCCATCTGTTaGCTTTTCGAGGCACTGCCC +
Preference number: 4 (lower is better)
Translates to: LGADTVAFPWKHRCAGRVQGAIC*LFEALP
Trigger: GGGCAGTGCCTCGAAAAGGCAACAGATGGCTCCCTG...CACACGGCCTGCACACCTGTGTTTCCATGGAAATGCCACCGTGTCTGCTCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000535933.5
ENST00000540946.5
ENST00000581396.5
CDS-3UTR GCA 90 bp AACACAGGTGTGCAGGCCGTGTGGAGCTGGGGATGTAGGAGTGGCCAGTGCCCGGTCCTGTTGAGCTCCTaGAGCAACTCCAGATCAGAT +
Preference number: 4 (lower is better)
Translates to: NTGVQAVWSWGCRSGQCPVLLSS*SNSRSD
Trigger: ATCTGATCTGGAGTTGCTGCAGGAGCTCAACAGGAC...CGGGCACTGGCCACTCCTACATCCCCAGCTCCACACGGCCTGCACACCTGTGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000535933.5
ENST00000540946.5
ENST00000581396.5
CDS-3UTR GCA 90 bp AGGCCTGGGAGCAGACACGGTGGCATTTCCATGGAAACACAGGTGTGCAGGCCGTCCATGACAGATGGCTaGGCAACGGGGATCCCTTCT +
Preference number: 4 (lower is better)
Translates to: RPGSRHGGISMETQVCRPSMTDG*ATGIPS
Trigger: AGAAGGGATCCCCGTTGCGCAGCCATCTGTCATGGA...CGGCCTGCACACCTGTGTTTCCATGGAAATGCCACCGTGTCTGCTCCCAGGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000581396.5
CDS-3UTR GCA 90 bp AGCAGACACGGTGGCATTTCCATGGAAACACAGGTGTGCAGGCCGTGTGGAGCTGGCAAACCACAGAGCTaGTCACAGGGCGAAGAGGGC +
Preference number: 4 (lower is better)
Translates to: SRHGGISMETQVCRPCGAGKPQS*SQGEEG
Trigger: GCCCTCTTCGCCCTGTGAGCAGCTCTGTGGTTTGCC...AGCTCCACACGGCCTGCACACCTGTGTTTCCATGGAAATGCCACCGTGTCTGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000535933.5
ENST00000540946.5
ENST00000581396.5
CDS-3UTR GCA 90 bp CAGACACGGTGGCATTTCCATGGAAACACAGGTGTGCAGGCCGTGTGGAGCTGGATGGAAACACAGGTGTaGAGGCCGTGTGGAGCTGGG +
Preference number: 4 (lower is better)
Translates to: QTRWHFHGNTGVQAVWSWMETQV*RPCGAG
Trigger: CCCAGCTCCACACGGCCTGCACACCTGTGTTTCCAT...CCAGCTCCACACGGCCTGCACACCTGTGTTTCCATGGAAATGCCACCGTGTCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000535933.5
ENST00000540946.5
ENST00000581396.5
CDS-3UTR GCA 90 bp GAAAAGAAGTGGCTGAAGCTGGTCCTGACTAGTGGGAGGCCTGGGAGCAGACACCCCAGGAGGGCAGAATaGCTGAGAAGGTCGCTGAGC +
Preference number: 4 (lower is better)
Translates to: EKKWLKLVLTSGRPGSRHPRRAE*LRRSLS
Trigger: GCTCAGCGACCTTCTCAGGCATTCTGCCCTCCTGGG...GTGTCTGCTCCCAGGCCTCCCACTAGTCAGGACCAGCTTCAGCCACTTCTTTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000478943.5
ENST00000581396.5
CDS-3UTR GCA 90 bp GGCCTGGGAGCAGACACGGTGGCATTTCCATGGAAACACAGGTGTGCAGGCCGTCTGCTCTTCCAGAGATaGCACAAAGCCCCTTCAGGG +
Preference number: 4 (lower is better)
Translates to: GLGADTVAFPWKHRCAGRLLFQR*HKAPSG
Trigger: CCCTGAAGGGGCTTTGTGGCATCTCTGGAAGAGCAG...ACGGCCTGCACACCTGTGTTTCCATGGAAATGCCACCGTGTCTGCTCCCAGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000478943.5
ENST00000581396.5
CDS-3UTR GCA 90 bp AGGGGAGAGAGTCTCTGGCTGCAGTTGTCCCACCACTCAGAGAAAAGAAGTGGCCTGCGGGCTGCCTGCTaGCCTCCCAATTGTCCTTGG +
Preference number: 4 (lower is better)
Translates to: RGESLWLQLSHHSEKRSGLRAAC*PPNCPW
Trigger: CCAAGGACAATTGGGAGGGCAGCAGGCAGCCCGCAG...GCCACTTCTTTTCTCTGAGTGGTGGGACAACTGCAGCCAGAGACTCTCTCCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000478943.5
ENST00000581396.5
CDS-3UTR GCA 90 bp GTGGGAGGGGAGAGAGTCTCTGGCTGCAGTTGTCCCACCACTCAGAGAAAAGAACCACCATCTGCGGGCTaGCTGCTGCCCTCCCAATTG +
Preference number: 4 (lower is better)
Translates to: VGGERVSGCSCPTTQRKEPPSAG*LLPSQL
Trigger: CAATTGGGAGGGCAGCAGGCAGCCCGCAGATGGTGG...TTCTTTTCTCTGAGTGGTGGGACAACTGCAGCCAGAGACTCTCTCCCCTCCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000478943.5
ENST00000581396.5
CDS-3UTR GCA 90 bp ACAAGTCCAAGGAGTGAGACCAGGCCCATGAGTGCAGCACACCCTGCTCTTCCAGTCGTCTCAGCAGCGTaGCACATGGCCACCATCTGC +
Preference number: 4 (lower is better)
Translates to: TSPRSETRPMSAAHPALPVVSAA*HMATIC
Trigger: GCAGATGGTGGCCATGTGGCACGCTGCTGAGACGAC...TGGAAGAGCAGGGTGTGCTGCACTCATGGGCCTGGTCTCACTCCTTGGACTTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000478943.5
ENST00000581396.5
CDS-3UTR GCA 90 bp AGGGGAGAGAGTCTCTGGCTGCAGTTGTCCCACCACTCAGAGAAAAGAAGTGGCAGCCAGGACCAGGTGTaGGGGTGTGAGCCTGCAGTG +
Preference number: 4 (lower is better)
Translates to: RGESLWLQLSHHSEKRSGSQDQV*GCEPAV
Trigger: CACTGCAGGCTCACACCCGCACACCTGGTCCTGGCT...GCCACTTCTTTTCTCTGAGTGGTGGGACAACTGCAGCCAGAGACTCTCTCCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR GCA 90 bp GCCATCCTGAATGCTCCCCAACGACCATGTCGCTGGTCTCTTCTCCCGTCAAGCATGACCCGAGTCCCTTaGCCATGGCCAGGAGACACA +
Preference number: 4 (lower is better)
Translates to: AILNAPQRPCRWSLLPSSMTRVP*PWPGDT
Trigger: TGTGTCTCCTGGCCATGGGCAAGGGACTCGGGTCAT...GCTTGACGGGAGAAGAGACCAGCGACATGGTCGTTGGGGAGCATTCAGGATGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR GCA 90 bp CTGAATGCTCCCCAACGACCATGTCGCTGGTCTCTTCTCCCGTCAAGCCCAGCCCACCGGGGCTATACTTaGTTCCTGTGCAGGCCTCAA +
Preference number: 4 (lower is better)
Translates to: LNAPQRPCRWSLLPSSPAHRGYT*FLCRPQ
Trigger: TTGAGGCCTGCACAGGAAGCAAGTATAGCCCCGGTG...GGCTGGGCTTGACGGGAGAAGAGACCAGCGACATGGTCGTTGGGGAGCATTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR GCA 90 bp AGAGAAAAGAAGTGGCTGAAGCTGGTCCTGACTAGTGGGAGGCCTGGGAGCAGACAGGCAGGGCTACTCTaGAGCAGGCAGGCCAAAGGC +
Preference number: 4 (lower is better)
Translates to: REKKWLKLVLTSGRPGSRQAGLL*SRQAKG
Trigger: GCCTTTGGCCTGCCTGCTGCAGAGTAGCCCTGCCTG...TCTGCTCCCAGGCCTCCCACTAGTCAGGACCAGCTTCAGCCACTTCTTTTCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR GCA 90 bp ACAAGTCCAAGGAGTGAGACCAGGCCCATGAGTGCAGCACACCCTGCTCTTCCACCTGCGAGCATCTGTTaGCCTTGGGCCATGTGGAGC +
Preference number: 4 (lower is better)
Translates to: TSPRSETRPMSAAHPALPPASIC*PWAMWS
Trigger: GCTCCACATGGCCCAAGGGCAACAGATGCTCGCAGG...TGGAAGAGCAGGGTGTGCTGCACTCATGGGCCTGGTCTCACTCCTTGGACTTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR GCA 90 bp AGCCTGGGCTGGCAGCTGAATGATGGAGAGAGGGTCAAGAAGGTGAGAGACCCCAAGTTCCCTCTTCACTaGCTGCCCCTCCTTCCGCAG +
Preference number: 4 (lower is better)
Translates to: SLGWQLNDGERVKKVRDPKFPLH*LPLLPQ
Trigger: CTGCGGAAGGAGGGGCAGGCAGTGAAGAGGGAACTT...GGGGTCTCTCACCTTCTTGACCCTCTCTCCATCATTCAGCTGCCAGCCCAGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478943.5
CDS-3UTR GCA 90 bp GAAACACAGGTGTGCAGGCCGTGTGGAGCTGGGGATGTAGGAGTGGCCAGTGCCTCCATGACAGATGGCTaGGCAACGGGGATCATTCCT +
Preference number: 4 (lower is better)
Translates to: ETQVCRPCGAGDVGVASASMTDG*ATGIIP
Trigger: AGGAATGATCCCCGTTGCGCAGCCATCTGTCATGGA...GGCACTGGCCACTCCTACATCCCCAGCTCCACACGGCCTGCACACCTGTGTTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535933.5
CDS-3UTR CCA 90 bp GGAGGCCTGGGAGCAGACACGGTGGCATTTCCATGGAAACACAGGTGTGCAGGCTTGGCCACAAGGATGTaGAAGCGGTGGCCACAGTTC +
Preference number: 4 (lower is better)
Translates to: GGLGADTVAFPWKHRCAGLATRM*KRWPQF
Trigger: GAACTGTGGCCACCGCTTCCACATCCTTGTGGCCAA...GCCTGCACACCTGTGTTTCCATGGAAATGCCACCGTGTCTGCTCCCAGGCCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000535933.5
ENST00000540946.5
CDS-3UTR CCA 90 bp ATGGAAACACAGGTGTGCAGGCCGTGTGGAGCTGGGGATGTAGGAGTGGCCAGTGTCCTCTGCTGTGATTaGGACCTGGGCATGGTCGCA +
Preference number: 4 (lower is better)
Translates to: METQVCRPCGAGDVGVASVLCCD*DLGMVA
Trigger: TGCGACCATGCCCAGGTCCCAATCACAGCAGAGGAC...ACTGGCCACTCCTACATCCCCAGCTCCACACGGCCTGCACACCTGTGTTTCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000581396.5
CDS-3UTR CCA 90 bp TGGGAGCAGACACGGTGGCATTTCCATGGAAACACAGGTGTGCAGGCCGTGTGGTGTGTTCCCCACCATTaGGCTCACCACGGCTGGAGA +
Preference number: 4 (lower is better)
Translates to: WEQTRWHFHGNTGVQAVWCVPHH*AHHGWR
Trigger: TCTCCAGCCGTGGTGAGCCCAATGGTGGGGAACACA...CCACACGGCCTGCACACCTGTGTTTCCATGGAAATGCCACCGTGTCTGCTCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000535933.5
ENST00000540946.5
ENST00000581396.5
CDS-3UTR CCA 90 bp CTGGGCTGGCAGCTGAATGATGGAGAGAGGGTCAAGAAGGTGAGAGACCCCCACTGTGTTCCCCACCATTaGGCTCACCACGGCTGGAGA +
Preference number: 4 (lower is better)
Translates to: LGWQLNDGERVKKVRDPHCVPHH*AHHGWR
Trigger: TCTCCAGCCGTGGTGAGCCCAATGGTGGGGAACACA...GTGGGGGTCTCTCACCTTCTTGACCCTCTCTCCATCATTCAGCTGCCAGCCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000478943.5
ENST00000581396.5
CDS-3UTR CCA 90 bp AGACACGGTGGCATTTCCATGGAAACACAGGTGTGCAGGCCGTGTGGAGCTGGGTGTGTTCCCCACCATTaGGCTCACCACGGCTGGAGA +
Preference number: 4 (lower is better)
Translates to: RHGGISMETQVCRPCGAGCVPHH*AHHGWR
Trigger: TCTCCAGCCGTGGTGAGCCCAATGGTGGGGAACACA...CCCAGCTCCACACGGCCTGCACACCTGTGTTTCCATGGAAATGCCACCGTGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000535933.5
ENST00000540946.5
ENST00000581396.5
CDS-3UTR CCA 90 bp CTCAGAGAAAAGAAGTGGCTGAAGCTGGTCCTGACTAGTGGGAGGCCTGGGAGCGGTGTGCAGGCCGTGTaGAGCTGGGGATGTAGGAGT +
Preference number: 4 (lower is better)
Translates to: LREKKWLKLVLTSGRPGSGVQAV*SWGCRS
Trigger: ACTCCTACATCCCCAGCTCCACACGGCCTGCACACC...GCTCCCAGGCCTCCCACTAGTCAGGACCAGCTTCAGCCACTTCTTTTCTCTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000535933.5
ENST00000581396.5
CDS-3UTR CCA 90 bp TGGGAGCAGACACGGTGGCATTTCCATGGAAACACAGGTGTGCAGGCCGTGTGGAGGGGAGAGAGTCTCTaGCTGCAGTTGTCCCACCAC +
Preference number: 4 (lower is better)
Translates to: WEQTRWHFHGNTGVQAVWRGESL*LQLSHH
Trigger: GTGGTGGGACAACTGCAGCCAGAGACTCTCTCCCCT...CCACACGGCCTGCACACCTGTGTTTCCATGGAAATGCCACCGTGTCTGCTCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000581396.5
CDS-3UTR CCA 90 bp ATGGAAACACAGGTGTGCAGGCCGTGTGGAGCTGGGGATGTAGGAGTGGCCAGTAGGGGAGAGAGTCTCTaGCTGCAGTTGTCCCACCAC +
Preference number: 4 (lower is better)
Translates to: METQVCRPCGAGDVGVASRGESL*LQLSHH
Trigger: GTGGTGGGACAACTGCAGCCAGAGACTCTCTCCCCT...ACTGGCCACTCCTACATCCCCAGCTCCACACGGCCTGCACACCTGTGTTTCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000581396.5
CDS-3UTR CCA 90 bp CTGGGAGCAGACACGGTGGCATTTCCATGGAAACACAGGTGTGCAGGCCGTGTGTCTGCCCGCTCTTCCTaGGAGGAAACATGGGCAGAG +
Preference number: 4 (lower is better)
Translates to: LGADTVAFPWKHRCAGRVSARSS*EETWAE
Trigger: CTCTGCCCATGTTTCCTCCCAGGAAGAGCGGGCAGA...CACACGGCCTGCACACCTGTGTTTCCATGGAAATGCCACCGTGTCTGCTCCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000581396.5
CDS-3UTR CCA 90 bp CATGGAAACACAGGTGTGCAGGCCGTGTGGAGCTGGGGATGTAGGAGTGGCCAGCGTGCTCTTTCTCCATaGGCGGGTGGAGGAAAGACA +
Preference number: 4 (lower is better)
Translates to: HGNTGVQAVWSWGCRSGQRALSP*AGGGKT
Trigger: TGTCTTTCCTCCACCCGCCCATGGAGAAAGAGCACG...CTGGCCACTCCTACATCCCCAGCTCCACACGGCCTGCACACCTGTGTTTCCATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000478943.5
ENST00000581396.5
CDS-3UTR CCA 90 bp ACAAGTCCAAGGAGTGAGACCAGGCCCATGAGTGCAGCACACCCTGCTCTTCCAGAGAGACCCCCACCATaGAGACCCAGCAGAGCCTTC +
Preference number: 4 (lower is better)
Translates to: TSPRSETRPMSAAHPALPERPPP*RPSRAF
Trigger: GAAGGCTCTGCTGGGTCTCCATGGTGGGGGTCTCTC...TGGAAGAGCAGGGTGTGCTGCACTCATGGGCCTGGTCTCACTCCTTGGACTTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000478943.5
ENST00000581396.5
CDS-3UTR CCA 90 bp AGAGGGTATCTGGAAGGAGGGCCAGTGGGGTGGATGGATGCTCTGAGCCTCGGGGCATCAGCCCATGCCTaGATCAGAGCAAGCACTTTG +
Preference number: 4 (lower is better)
Translates to: RGYLEGGPVGWMDALSLGASAHA*IRASTL
Trigger: CAAAGTGCTTGCTCTGATCCAGGCATGGGCTGATGC...CCCGAGGCTCAGAGCATCCATCCACCCCACTGGCCCTCCTTCCAGATACCCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379504.8
CDS-3UTR CCA 90 bp ACAGGGCGGGGCCGGGCGTGCTCTTTCTCCATGGGCGGGTGGAGGAAAGACAGTAAAGCTGTTTGCTGCTaGCTCTTGAGGCAGATGTGT +
Preference number: 4 (lower is better)
Translates to: TGRGRACSFSMGGWRKDSKAVCC*LLRQMC
Trigger: ACACATCTGCCTCAAGAGCCAGCAGCAAACAGCTTT...ACTGTCTTTCCTCCACCCGCCCATGGAGAAAGAGCACGCCCGGCCCCGCCCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR CCA 90 bp CTAGTGGGAGGCCTGGGAGCAGACACGGTGGCATTTCCATGGAAACACAGGTGTCGAGTCCCTTGCCCATaGCCAGGAGACACACCAGTG +
Preference number: 4 (lower is better)
Translates to: LVGGLGADTVAFPWKHRCRVPCP*PGDTPV
Trigger: CACTGGTGTGTCTCCTGGCCATGGGCAAGGGACTCG...ACACCTGTGTTTCCATGGAAATGCCACCGTGTCTGCTCCCAGGCCTCCCACTAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR CCA 90 bp GAGCCTGCAGTGTGTGCGTGGCAGTTTGGTTTATTGGTAGTGTCGTCTCAGCAGGGCTGGACCAGGGCCTaGGATGACCCGAGTCCCTTG +
Preference number: 4 (lower is better)
Translates to: EPAVCAWQFGLLVVSSQQGWTRA*DDPSPL
Trigger: CAAGGGACTCGGGTCATCCCAGGCCCTGGTCCAGCC...CTGCTGAGACGACACTACCAATAAACCAAACTGCCACGCACACACTGCAGGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR CCA 90 bp GGCATTTCCATGGAAACACAGGTGTGCAGGCCGTGTGGAGCTGGGGATGTAGGACTCTCCAATGATGCCTaGCAACCAGCTGGCGCTGGC +
Preference number: 4 (lower is better)
Translates to: GISMETQVCRPCGAGDVGLSNDA*QPAGAG
Trigger: GCCAGCGCCAGCTGGTTGCCAGGCATCATTGGAGAG...TCCTACATCCCCAGCTCCACACGGCCTGCACACCTGTGTTTCCATGGAAATGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR CCA 90 bp CAGAGCAATACCTCCAGTGCAAGTCCCTCCACAAGCCAGGACCAGGTGTGCGGGAAGTGGAACCCACTCTaGGGCACCGGGGCTATACTT +
Preference number: 4 (lower is better)
Translates to: QSNTSSASPSTSQDQVCGKWNPL*GTGAIL
Trigger: AAGTATAGCCCCGGTGCCCCAGAGTGGGTTCCACTT...CCCGCACACCTGGTCCTGGCTTGTGGAGGGACTTGCACTGGAGGTATTGCTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR CCA 90 bp TGTCACAAGGTGACAAGTCCAAGGAGTGAGACCAGGCCCATGAGTGCAGCACACCTCGCCAGGGCTAAGTaGAACCCACTCTGGGGCACC +
Preference number: 4 (lower is better)
Translates to: CHKVTSPRSETRPMSAAHLARAK*NPLWGT
Trigger: GGTGCCCCAGAGTGGGTTCCACTTAGCCCTGGCGAG...GTGTGCTGCACTCATGGGCCTGGTCTCACTCCTTGGACTTGTCACCTTGTGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR CCA 90 bp GAGCCTGCAGTGTGTGCGTGGCAGTTTGGTTTATTGGTAGTGTCGTCTCAGCAGGCCGCACCCCCTTCCTaGACCAGGCAGCCTAAGGAC +
Preference number: 4 (lower is better)
Translates to: EPAVCAWQFGLLVVSSQQAAPPS*TRQPKD
Trigger: GTCCTTAGGCTGCCTGGTCCAGGAAGGGGGTGCGGC...CTGCTGAGACGACACTACCAATAAACCAAACTGCCACGCACACACTGCAGGCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR CCA 90 bp ATGGAAACACAGGTGTGCAGGCCGTGTGGAGCTGGGGATGTAGGAGTGGCCAGTTCACGGAGAGGCTGGTaGGCCTTGAGAGTCCAGGTT +
Preference number: 4 (lower is better)
Translates to: METQVCRPCGAGDVGVASSRRGW*ALRVQV
Trigger: AACCTGGACTCTCAAGGCCCACCAGCCTCTCCGTGA...ACTGGCCACTCCTACATCCCCAGCTCCACACGGCCTGCACACCTGTGTTTCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR CCA 90 bp GGGGCCGGGCGTGCTCTTTCTCCATGGGCGGGTGGAGGAAAGACAGTCCGGGTGGTAGGCAGGAGGGAATaGTTAGTTTTCACATCTCAG +
Preference number: 4 (lower is better)
Translates to: GAGRALSPWAGGGKTVRVVGRRE*LVFTSQ
Trigger: CTGAGATGTGAAAACTAACCATTCCCTCCTGCCTAC...CACCCGGACTGTCTTTCCTCCACCCGCCCATGGAGAAAGAGCACGCCCGGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR CCA 90 bp AGGCCTGGGAGCAGACACGGTGGCATTTCCATGGAAACACAGGTGTGCAGGCCGGTCATTCTCTCAGCCTaGCCACAGATGGCCTGCTCA +
Preference number: 4 (lower is better)
Translates to: RPGSRHGGISMETQVCRPVILSA*PQMACS
Trigger: TGAGCAGGCCATCTGTGGCCAGGCTGAGAGAATGAC...CGGCCTGCACACCTGTGTTTCCATGGAAATGCCACCGTGTCTGCTCCCAGGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR CCA 90 bp AGAGAAAAGAAGTGGCTGAAGCTGGTCCTGACTAGTGGGAGGCCTGGGAGCAGAGATGGCTGCTCCCTATaGCTGGTGGCCGCAGGGGAA +
Preference number: 4 (lower is better)
Translates to: REKKWLKLVLTSGRPGSRDGCSL*LVAAGE
Trigger: TTCCCCTGCGGCCACCAGCCATAGGGAGCAGCCATC...TCTGCTCCCAGGCCTCCCACTAGTCAGGACCAGCTTCAGCCACTTCTTTTCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR CCA 90 bp GAAACACAGGTGTGCAGGCCGTGTGGAGCTGGGGATGTAGGAGTGGCCAGTGCCCGCAGCCTGGCAATCTaGATCAGAGCAAGCACTTTG +
Preference number: 4 (lower is better)
Translates to: ETQVCRPCGAGDVGVASARSLAI*IRASTL
Trigger: CAAAGTGCTTGCTCTGATCCAGATTGCCAGGCTGCG...GGCACTGGCCACTCCTACATCCCCAGCTCCACACGGCCTGCACACCTGTGTTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540946.5
CDS-3UTR TCA 90 bp CTGAATGCTCCCCAACGACCATGTCGCTGGTCTCTTCTCCCGTCAAGCCCAGCCGTTCTGAATTGGCTGTaGTGGGGCCAGTCACACTCA +
Preference number: 4 (lower is better)
Translates to: LNAPQRPCRWSLLPSSPAVLNWL*WGQSHS
Trigger: TGAGTGTGACTGGCCCCATCACAGCCAATTCAGAAC...GGCTGGGCTTGACGGGAGAAGAGACCAGCGACATGGTCGTTGGGGAGCATTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR TCA 90 bp AGGCCTGGGAGCAGACACGGTGGCATTTCCATGGAAACACAGGTGTGCAGGCCGGTTCTGAATTGGCTGTaGTGGGGCCAGTCACACTCA +
Preference number: 4 (lower is better)
Translates to: RPGSRHGGISMETQVCRPVLNWL*WGQSHS
Trigger: TGAGTGTGACTGGCCCCATCACAGCCAATTCAGAAC...CGGCCTGCACACCTGTGTTTCCATGGAAATGCCACCGTGTCTGCTCCCAGGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000581396.5
CDS-3UTR TCA 90 bp CTGGGAGCAGACACGGTGGCATTTCCATGGAAACACAGGTGTGCAGGCCGTGTGCCTGGCAATCTGTTCTaGATTGGCTGTGATGGGGCC +
Preference number: 4 (lower is better)
Translates to: LGADTVAFPWKHRCAGRVPGNLF*IGCDGA
Trigger: GGCCCCATCACAGCCAATTCAGAACAGATTGCCAGG...CACACGGCCTGCACACCTGTGTTTCCATGGAAATGCCACCGTGTCTGCTCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000581396.5
CDS-3UTR TCA 90 bp GTGGGAGGGGAGAGAGTCTCTGGCTGCAGTTGTCCCACCACTCAGAGAAAAGAACCCGACAGGTCCTGTTaGGCTCCTGCAGCAACTCCA +
Preference number: 4 (lower is better)
Translates to: VGGERVSGCSCPTTQRKEPDRSC*APAATP
Trigger: TGGAGTTGCTGCAGGAGCTCAACAGGACCTGTCGGG...TTCTTTTCTCTGAGTGGTGGGACAACTGCAGCCAGAGACTCTCTCCCCTCCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000581396.5
CDS-3UTR TCA 90 bp ATGAGTGCAGCACACCCTGCTCTTCCAGAGATGCCACAAAGCCCCTTCAGGGAGCCTCAATGTCGTCCATaGCAGATGGCTGCGCAACGG +
Preference number: 4 (lower is better)
Translates to: MSAAHPALPEMPQSPFREPQCRP*QMAAQR
Trigger: CCGTTGCGCAGCCATCTGTCATGGACGACATTGAGG...CTCCCTGAAGGGGCTTTGTGGCATCTCTGGAAGAGCAGGGTGTGCTGCACTCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000478943.5
ENST00000581396.5
CDS-3UTR TCA 90 bp GAAAAGAAGTGGCTGAAGCTGGTCCTGACTAGTGGGAGGCCTGGGAGCAGACACCCTCAATGTCGTCCATaGCAGATGGCTGCGCAACGG +
Preference number: 4 (lower is better)
Translates to: EKKWLKLVLTSGRPGSRHPQCRP*QMAAQR
Trigger: CCGTTGCGCAGCCATCTGTCATGGACGACATTGAGG...GTGTCTGCTCCCAGGCCTCCCACTAGTCAGGACCAGCTTCAGCCACTTCTTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000535933.5
ENST00000581396.5
CDS-3UTR TCA 90 bp GAGGTGCAAGCAGGCCACCTGAGGGGTGGCTCCAGGCTAGGAAGGCAGGTGACACAAACTCTTCACTTGTaGCACCCTCCTCCAGATCAT +
Preference number: 4 (lower is better)
Translates to: EVQAGHLRGGSRLGRQVTQTLHL*HPPPDH
Trigger: ATGATCTGGAGGAGGGTGTCACAAGTGAAGAGTTTG...TGTCACCTGCCTTCCTAGCCTGGAGCCACCCCTCAGGTGGCCTGCTTGCACCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR TCA 90 bp GTTTGGTTTATTGGTAGTGTCGTCTCAGCAGCGTGCCACATGGCCACCATCTGCGTGAGACCAGGCCCATaGGTGCAGCACACCCTGCTC +
Preference number: 4 (lower is better)
Translates to: VWFIGSVVSAACHMATICVRPGP*VQHTLL
Trigger: GAGCAGGGTGTGCTGCACTCATGGGCCTGGTCTCAC...GCAGATGGTGGCCATGTGGCACGCTGCTGAGACGACACTACCAATAAACCAAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000478943.5
ENST00000581396.5
CDS-3UTR TCA 90 bp CTGGGAGCAGACACGGTGGCATTTCCATGGAAACACAGGTGTGCAGGCCGTGTGGGGCTGGCAGCTGAATaGTGGAGAGAGGGTCAAGAA +
Preference number: 4 (lower is better)
Translates to: LGADTVAFPWKHRCAGRVGLAAE*WREGQE
Trigger: TTCTTGACCCTCTCTCCATCATTCAGCTGCCAGCCC...CACACGGCCTGCACACCTGTGTTTCCATGGAAATGCCACCGTGTCTGCTCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000478943.5
ENST00000581396.5
CDS-3UTR TCA 90 bp ATGGAAACACAGGTGTGCAGGCCGTGTGGAGCTGGGGATGTAGGAGTGGCCAGTGGGCTGGCAGCTGAATaGTGGAGAGAGGGTCAAGAA +
Preference number: 4 (lower is better)
Translates to: METQVCRPCGAGDVGVASGLAAE*WREGQE
Trigger: TTCTTGACCCTCTCTCCATCATTCAGCTGCCAGCCC...ACTGGCCACTCCTACATCCCCAGCTCCACACGGCCTGCACACCTGTGTTTCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000478943.5
ENST00000581396.5
CDS-3UTR TCA 90 bp CCTGGGAGCAGACACGGTGGCATTTCCATGGAAACACAGGTGTGCAGGCCGTGTGGGCTGGCAGCTGAATaGTGGAGAGAGGGTCAAGAA +
Preference number: 4 (lower is better)
Translates to: PGSRHGGISMETQVCRPCGLAAE*WREGQE
Trigger: TTCTTGACCCTCTCTCCATCATTCAGCTGCCAGCCC...ACACGGCCTGCACACCTGTGTTTCCATGGAAATGCCACCGTGTCTGCTCCCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000478943.5
ENST00000581396.5
CDS-3UTR TCA 90 bp GTGGGAGGGGAGAGAGTCTCTGGCTGCAGTTGTCCCACCACTCAGAGAAAAGAAGCCTGGGCTGGCAGCTaGATGATGGAGAGAGGGTCA +
Preference number: 4 (lower is better)
Translates to: VGGERVSGCSCPTTQRKEAWAGS*MMERGS
Trigger: TGACCCTCTCTCCATCATTCAGCTGCCAGCCCAGGC...TTCTTTTCTCTGAGTGGTGGGACAACTGCAGCCAGAGACTCTCTCCCCTCCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000478943.5
ENST00000581396.5
CDS-3UTR TCA 90 bp CTAGTGGGAGGCCTGGGAGCAGACACGGTGGCATTTCCATGGAAACACAGGTGTCCATGTGCACATCTGTaGCACTTCCCCAGGCAAGCC +
Preference number: 4 (lower is better)
Translates to: LVGGLGADTVAFPWKHRCPCAHL*HFPRQA
Trigger: GGCTTGCCTGGGGAAGTGTCACAGATGTGCACATGG...ACACCTGTGTTTCCATGGAAATGCCACCGTGTCTGCTCCCAGGCCTCCCACTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR TCA 90 bp GCCATCCTGAATGCTCCCCAACGACCATGTCGCTGGTCTCTTCTCCCGTCAAGCCTGAAGTCGCCATCCTaGATGCTCCCCAACGACCAT +
Preference number: 4 (lower is better)
Translates to: AILNAPQRPCRWSLLPSSLKSPS*MLPNDH
Trigger: ATGGTCGTTGGGGAGCATTCAGGATGGCGACTTCAG...GCTTGACGGGAGAAGAGACCAGCGACATGGTCGTTGGGGAGCATTCAGGATGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR TCA 90 bp TGTCACAAGGTGACAAGTCCAAGGAGTGAGACCAGGCCCATGAGTGCAGCACACAGAGTCCAGGTTTCCTaGCAGAGCCGCACCCCCTTC +
Preference number: 4 (lower is better)
Translates to: CHKVTSPRSETRPMSAAHRVQVS*QSRTPF
Trigger: GAAGGGGGTGCGGCTCTGTCAGGAAACCTGGACTCT...GTGTGCTGCACTCATGGGCCTGGTCTCACTCCTTGGACTTGTCACCTTGTGACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR TCA 90 bp GTGTGGAGCTGGGGATGTAGGAGTGGCCAGTGCCCGGTGTCCACGGGGTGCGAGACATCTCAGCAACAATaGACGCAGAAAGGGTTAAAC +
Preference number: 4 (lower is better)
Translates to: VWSWGCRSGQCPVSTGCETSQQQ*TQKGLN
Trigger: GTTTAACCCTTTCTGCGTTCATTGTTGCTGAGATGT...CTCGCACCCCGTGGACACCGGGCACTGGCCACTCCTACATCCCCAGCTCCACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR TCA 90 bp AGTGGGAGGCCTGGGAGCAGACACGGTGGCATTTCCATGGAAACACAGGTGTGCCCAGCAACAACCCCTTaGGGCTCCAAAGCTCCTTGT +
Preference number: 4 (lower is better)
Translates to: SGRPGSRHGGISMETQVCPATTP*GSKAPC
Trigger: ACAAGGAGCTTTGGAGCCTCAAGGGGTTGTTGCTGG...GCACACCTGTGTTTCCATGGAAATGCCACCGTGTCTGCTCCCAGGCCTCCCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR TCA 90 bp AGAGTCTCTGGCTGCAGTTGTCCCACCACTCAGAGAAAAGAAGTGGCTGAAGCTGAGCCTCGGGTGCACTaGCCCACCCTCCAGAACCAG +
Preference number: 4 (lower is better)
Translates to: RVSGCSCPTTQRKEVAEAEPRVH*PTLQNQ
Trigger: CTGGTTCTGGAGGGTGGGTCAGTGCACCCGAGGCTC...AGCTTCAGCCACTTCTTTTCTCTGAGTGGTGGGACAACTGCAGCCAGAGACTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR TCA 90 bp CCTTTGGTGGTGAAGGGTACATGGGACCTTGGGTTTCTGCTTACCCTACTGAGCAGCTTCTCCTGTGGATaGGGGGCCAGGCAGGGTGGT +
Preference number: 4 (lower is better)
Translates to: PLVVKGTWDLGFLLTLLSSFSCG*GARQGG
Trigger: ACCACCCTGCCTGGCCCCTCATCCACAGGAGAAGCT...GCTCAGTAGGGTAAGCAGAAACCCAAGGTCCCATGTACCCTTCACCACCAAAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000468944.1
CDS-3UTR TCA 90 bp GGAGGCCTGGGAGCAGACACGGTGGCATTTCCATGGAAACACAGGTGTGCAGGCAACTCTCCTCTGTTGTaGATGGCTCATGTCCCCAGG +
Preference number: 4 (lower is better)
Translates to: GGLGADTVAFPWKHRCAGNSPLL*MAHVPR
Trigger: CCTGGGGACATGAGCCATTCACAACAGAGGAGAGTT...GCCTGCACACCTGTGTTTCCATGGAAATGCCACCGTGTCTGCTCCCAGGCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478943.5
CDS-3UTR GCA 90 bp TGGCATTTCCATGGAAACACAGGTGTGCAGGCCGTGTGGAGCTGGGGATGTAGGCAGGGAGCCATCTGTTaGCTTTTCGAGGCACTGCCC +
Preference number: 4 (lower is better)
Translates to: WHFHGNTGVQAVWSWGCRQGAIC*LFEALP
Trigger: GGGCAGTGCCTCGAAAAGGCAACAGATGGCTCCCTG...CCTACATCCCCAGCTCCACACGGCCTGCACACCTGTGTTTCCATGGAAATGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000535933.5
ENST00000540946.5
ENST00000581396.5
CDS-3UTR GCA 90 bp GGCTGGCAGCTGAATGATGGAGAGAGGGTCAAGAAGGTGAGAGACCCCCACCATCCAGCACTTGTCCTCTaGTGTGATTGGGACCTGGGC +
Preference number: 4 (lower is better)
Translates to: GWQLNDGERVKKVRDPHHPALVL*CDWDLG
Trigger: GCCCAGGTCCCAATCACAGCAGAGGACAAGTGCTGG...ATGGTGGGGGTCTCTCACCTTCTTGACCCTCTCTCCATCATTCAGCTGCCAGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000581396.5
CDS-3UTR GCA 90 bp CTAGTGGGAGGCCTGGGAGCAGACACGGTGGCATTTCCATGGAAACACAGGTGTCCAGCACTTGTCCTCTaGTGTGATTGGGACCTGGGC +
Preference number: 4 (lower is better)
Translates to: LVGGLGADTVAFPWKHRCPALVL*CDWDLG
Trigger: GCCCAGGTCCCAATCACAGCAGAGGACAAGTGCTGG...ACACCTGTGTTTCCATGGAAATGCCACCGTGTCTGCTCCCAGGCCTCCCACTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000581396.5
CDS-3UTR GCA 90 bp TGGCATTTCCATGGAAACACAGGTGTGCAGGCCGTGTGGAGCTGGGGATGTAGGCCAGCACTTGTCCTCTaGTGTGATTGGGACCTGGGC +
Preference number: 4 (lower is better)
Translates to: WHFHGNTGVQAVWSWGCRPALVL*CDWDLG
Trigger: GCCCAGGTCCCAATCACAGCAGAGGACAAGTGCTGG...CCTACATCCCCAGCTCCACACGGCCTGCACACCTGTGTTTCCATGGAAATGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000581396.5
CDS-3UTR GCA 90 bp CCCAGGAGGGCAGAATGCCTGAGAAGGTCGCTGAGCCAGGCAGAGGTGAGCACAGTCCTGTTGAGCTCCTaGAGCAACTCCAGATCAGAT +
Preference number: 4 (lower is better)
Translates to: PRRAECLRRSLSQAEVSTVLLSS*SNSRSD
Trigger: ATCTGATCTGGAGTTGCTGCAGGAGCTCAACAGGAC...TGTGCTCACCTCTGCCTGGCTCAGCGACCTTCTCAGGCATTCTGCCCTCCTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000581396.5
CDS-3UTR GCA 90 bp GGCCTGGGAGCAGACACGGTGGCATTTCCATGGAAACACAGGTGTGCAGGCCGTGTTACCGTCTTGCGCTaGTCAGCCAAGGAGTTTCCT +
Preference number: 4 (lower is better)
Translates to: GLGADTVAFPWKHRCAGRVTVLR*SAKEFP
Trigger: AGGAAACTCCTTGGCTGAGCAGCGCAAGACGGTAAC...ACGGCCTGCACACCTGTGTTTCCATGGAAATGCCACCGTGTCTGCTCCCAGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000535933.5
ENST00000540946.5
ENST00000581396.5
CDS-3UTR GCA 90 bp CAGAGCAATACCTCCAGTGCAAGTCCCTCCACAAGCCAGGACCAGGTGTGCGGGGTTACCGTCTTGCGCTaGTCAGCCAAGGAGTTTCCT +
Preference number: 4 (lower is better)
Translates to: QSNTSSASPSTSQDQVCGVTVLR*SAKEFP
Trigger: AGGAAACTCCTTGGCTGAGCAGCGCAAGACGGTAAC...CCCGCACACCTGGTCCTGGCTTGTGGAGGGACTTGCACTGGAGGTATTGCTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR GCA 90 bp CTGAATGCTCCCCAACGACCATGTCGCTGGTCTCTTCTCCCGTCAAGCCCAGCCCATAGGTTACCGTCTTaGGCTGCTCAGCCAAGGAGT +
Preference number: 4 (lower is better)
Translates to: LNAPQRPCRWSLLPSSPAHRLPS*AAQPRS
Trigger: ACTCCTTGGCTGAGCAGCGCAAGACGGTAACCTATG...GGCTGGGCTTGACGGGAGAAGAGACCAGCGACATGGTCGTTGGGGAGCATTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR GCA 90 bp ACAAGTCCAAGGAGTGAGACCAGGCCCATGAGTGCAGCACACCCTGCTCTTCCAATGGAAACACAGGTGTaGAGGCCGTGTGGAGCTGGG +
Preference number: 4 (lower is better)
Translates to: TSPRSETRPMSAAHPALPMETQV*RPCGAG
Trigger: CCCAGCTCCACACGGCCTGCACACCTGTGTTTCCAT...TGGAAGAGCAGGGTGTGCTGCACTCATGGGCCTGGTCTCACTCCTTGGACTTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000478943.5
ENST00000581396.5
CDS-3UTR GCA 90 bp GGTGGCATTTCCATGGAAACACAGGTGTGCAGGCCGTGTGGAGCTGGGGATGTAATGGAAACACAGGTGTaGAGGCCGTGTGGAGCTGGG +
Preference number: 4 (lower is better)
Translates to: GGISMETQVCRPCGAGDVMETQV*RPCGAG
Trigger: CCCAGCTCCACACGGCCTGCACACCTGTGTTTCCAT...TACATCCCCAGCTCCACACGGCCTGCACACCTGTGTTTCCATGGAAATGCCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000535933.5
ENST00000540946.5
ENST00000581396.5
CDS-3UTR GCA 90 bp AGACACGGTGGCATTTCCATGGAAACACAGGTGTGCAGGCCGTGTGGAGCTGGGCTGCTCTTCCAGAGATaGCACAAAGCCCCTTCAGGG +
Preference number: 4 (lower is better)
Translates to: RHGGISMETQVCRPCGAGLLFQR*HKAPSG
Trigger: CCCTGAAGGGGCTTTGTGGCATCTCTGGAAGAGCAG...CCCAGCTCCACACGGCCTGCACACCTGTGTTTCCATGGAAATGCCACCGTGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000478943.5
ENST00000581396.5
CDS-3UTR GCA 90 bp AGAGAAAAGAAGTGGCTGAAGCTGGTCCTGACTAGTGGGAGGCCTGGGAGCAGAGACCAGGCCCATGAGTaGAGCACACCCTGCTCTTCC +
Preference number: 4 (lower is better)
Translates to: REKKWLKLVLTSGRPGSRDQAHE*STPCSS
Trigger: GGAAGAGCAGGGTGTGCTGCACTCATGGGCCTGGTC...TCTGCTCCCAGGCCTCCCACTAGTCAGGACCAGCTTCAGCCACTTCTTTTCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000478943.5
ENST00000581396.5
CDS-3UTR GCA 90 bp AGAGAAAAGAAGTGGCTGAAGCTGGTCCTGACTAGTGGGAGGCCTGGGAGCAGAGTCGTCTCAGCAGCGTaGCACATGGCCACCATCTGC +
Preference number: 4 (lower is better)
Translates to: REKKWLKLVLTSGRPGSRVVSAA*HMATIC
Trigger: GCAGATGGTGGCCATGTGGCACGCTGCTGAGACGAC...TCTGCTCCCAGGCCTCCCACTAGTCAGGACCAGCTTCAGCCACTTCTTTTCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000478943.5
ENST00000581396.5
CDS-3UTR GCA 90 bp CTGAATGCTCCCCAACGACCATGTCGCTGGTCTCTTCTCCCGTCAAGCCCAGCCCAGAGCGTCCAAGTCTaGCATGGGAAATTCAACCCC +
Preference number: 4 (lower is better)
Translates to: LNAPQRPCRWSLLPSSPAQSVQV*HGKFNP
Trigger: GGGGTTGAATTTCCCATGGCAGACTTGGACGCTCTG...GGCTGGGCTTGACGGGAGAAGAGACCAGCGACATGGTCGTTGGGGAGCATTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR GCA 90 bp CATGGAAACACAGGTGTGCAGGCCGTGTGGAGCTGGGGATGTAGGAGTGGCCAGGGGAACCTCCAAGGATaGCACAAAGCTGTTTGCTGC +
Preference number: 4 (lower is better)
Translates to: HGNTGVQAVWSWGCRSGQGNLQG*HKAVCC
Trigger: GCAGCAAACAGCTTTGTGGCATCCTTGGAGGTTCCC...CTGGCCACTCCTACATCCCCAGCTCCACACGGCCTGCACACCTGTGTTTCCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR GCA 90 bp GAGCCTGCAGTGTGTGCGTGGCAGTTTGGTTTATTGGTAGTGTCGTCTCAGCAGGGCAGGTGTGGCATGTaGTGCCAGAGAGGACAGGGC +
Preference number: 4 (lower is better)
Translates to: EPAVCAWQFGLLVVSSQQGRCGM*CQRGQG
Trigger: GCCCTGTCCTCTCTGGCAGCACATGCCACACCTGCC...CTGCTGAGACGACACTACCAATAAACCAAACTGCCACGCACACACTGCAGGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR GCA 90 bp ATGGAAACACAGGTGTGCAGGCCGTGTGGAGCTGGGGATGTAGGAGTGGCCAGTCCCAGCCACCTTTTCTaGAGCTCAAGTGAAGCCAGC +
Preference number: 4 (lower is better)
Translates to: METQVCRPCGAGDVGVASPSHLF*SSSEAS
Trigger: GCTGGCTTCACTTGAGCTGCAGAAAAGGTGGCTGGG...ACTGGCCACTCCTACATCCCCAGCTCCACACGGCCTGCACACCTGTGTTTCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR GCA 90 bp AGGCCTGGGAGCAGACACGGTGGCATTTCCATGGAAACACAGGTGTGCAGGCCGGCACTATGGAATCCCTaGTCCTTTCAGAGCCTCCAG +
Preference number: 4 (lower is better)
Translates to: RPGSRHGGISMETQVCRPALWNP*SFQSLQ
Trigger: CTGGAGGCTCTGAAAGGAGCAGGGATTCCATAGTGC...CGGCCTGCACACCTGTGTTTCCATGGAAATGCCACCGTGTCTGCTCCCAGGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR GCA 90 bp TGGGAGCAGACACGGTGGCATTTCCATGGAAACACAGGTGTGCAGGCCGTGTGGAAGCTCCTTGTCCCATaGACGCTGGTAAGCGAGCCA +
Preference number: 4 (lower is better)
Translates to: WEQTRWHFHGNTGVQAVWKLLVP*TLVSEP
Trigger: TGGCTCGCTTACCAGCGTGCATGGGACAAGGAGCTT...CCACACGGCCTGCACACCTGTGTTTCCATGGAAATGCCACCGTGTCTGCTCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR GCA 90 bp AGGGGAGAGAGTCTCTGGCTGCAGTTGTCCCACCACTCAGAGAAAAGAAGTGGCAGCATCGGCAGCAGCTaGCCTGCGAGCATCTGTTGC +
Preference number: 4 (lower is better)
Translates to: RGESLWLQLSHHSEKRSGSIGSS*PASICC
Trigger: GCAACAGATGCTCGCAGGGCAGCTGCTGCCGATGCT...GCCACTTCTTTTCTCTGAGTGGTGGGACAACTGCAGCCAGAGACTCTCTCCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR GCA 90 bp GGCTGGCAGCTGAATGATGGAGAGAGGGTCAAGAAGGTGAGAGACCCCCACCATAGTGCTCCTCCACACTaGTCTTCCAGAGCTGCCCCA +
Preference number: 4 (lower is better)
Translates to: GWQLNDGERVKKVRDPHHSAPPH*SSRAAP
Trigger: TGGGGCAGCTCTGGAAGAGCAGTGTGGAGGAGCACT...ATGGTGGGGGTCTCTCACCTTCTTGACCCTCTCTCCATCATTCAGCTGCCAGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR GCA 90 bp AGAGTCTCTGGCTGCAGTTGTCCCACCACTCAGAGAAAAGAAGTGGCTGAAGCTTCGGGGGCTGATGGCTaGTCCCTATGGCTGGTGGCC +
Preference number: 4 (lower is better)
Translates to: RVSGCSCPTTQRKEVAEASGADG*SLWLVA
Trigger: GGCCACCAGCCATAGGGAGCAGCCATCAGCCCCCGA...AGCTTCAGCCACTTCTTTTCTCTGAGTGGTGGGACAACTGCAGCCAGAGACTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR GCA 90 bp TGGGAGCAGACACGGTGGCATTTCCATGGAAACACAGGTGTGCAGGCCGTGTGGCACCTCTGGGTAGCCTaGTGGGTGTGCTTTTCGTCA +
Preference number: 4 (lower is better)
Translates to: WEQTRWHFHGNTGVQAVWHLWVA*WVCFSS
Trigger: TGACGAAAAGCACACCCAGCAGGCTACCCAGAGGTG...CCACACGGCCTGCACACCTGTGTTTCCATGGAAATGCCACCGTGTCTGCTCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478943.5
CDS-3UTR CCA 90 bp GGCCTGGGAGCAGACACGGTGGCATTTCCATGGAAACACAGGTGTGCAGGCCGTTCTTCAGGGCTCGAATaGCATCCTTTGGCCCTTCCT +
Preference number: 4 (lower is better)
Translates to: GLGADTVAFPWKHRCAGRSSGLE*HPLALP
Trigger: AGGAAGGGCCAAAGGATGCCATTCGAGCCCTGAAGA...ACGGCCTGCACACCTGTGTTTCCATGGAAATGCCACCGTGTCTGCTCCCAGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000535933.5
ENST00000540946.5
ENST00000581396.5
CDS-3UTR CCA 90 bp CCTGGGAGCAGACACGGTGGCATTTCCATGGAAACACAGGTGTGCAGGCCGTGTTTGGCCACAAGGATGTaGAAGCGGTGGCCACAGTTC +
Preference number: 4 (lower is better)
Translates to: PGSRHGGISMETQVCRPCLATRM*KRWPQF
Trigger: GAACTGTGGCCACCGCTTCCACATCCTTGTGGCCAA...ACACGGCCTGCACACCTGTGTTTCCATGGAAATGCCACCGTGTCTGCTCCCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000535933.5
ENST00000540946.5
CDS-3UTR CCA 90 bp AGACACGGTGGCATTTCCATGGAAACACAGGTGTGCAGGCCGTGTGGAGCTGGGTTGGCCACAAGGATGTaGAAGCGGTGGCCACAGTTC +
Preference number: 4 (lower is better)
Translates to: RHGGISMETQVCRPCGAGLATRM*KRWPQF
Trigger: GAACTGTGGCCACCGCTTCCACATCCTTGTGGCCAA...CCCAGCTCCACACGGCCTGCACACCTGTGTTTCCATGGAAATGCCACCGTGTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000535933.5
ENST00000540946.5
CDS-3UTR CCA 90 bp AGTGGGAGGCCTGGGAGCAGACACGGTGGCATTTCCATGGAAACACAGGTGTGCATTGGGACCTGGGCATaGTCGCAGCTGGATCCACTT +
Preference number: 4 (lower is better)
Translates to: SGRPGSRHGGISMETQVCIGTWA*SQLDPL
Trigger: AAGTGGATCCAGCTGCGACCATGCCCAGGTCCCAAT...GCACACCTGTGTTTCCATGGAAATGCCACCGTGTCTGCTCCCAGGCCTCCCACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000581396.5
CDS-3UTR CCA 90 bp CTAGTGGGAGGCCTGGGAGCAGACACGGTGGCATTTCCATGGAAACACAGGTGTGCTGTGATTGGGACCTaGGCATGGTCGCAGCTGGAT +
Preference number: 4 (lower is better)
Translates to: LVGGLGADTVAFPWKHRCAVIGT*AWSQLD
Trigger: ATCCAGCTGCGACCATGCCCAGGTCCCAATCACAGC...ACACCTGTGTTTCCATGGAAATGCCACCGTGTCTGCTCCCAGGCCTCCCACTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000581396.5
CDS-3UTR CCA 90 bp CTAGTGGGAGGCCTGGGAGCAGACACGGTGGCATTTCCATGGAAACACAGGTGTGTCCTCTGCTGTGATTaGGACCTGGGCATGGTCGCA +
Preference number: 4 (lower is better)
Translates to: LVGGLGADTVAFPWKHRCVLCCD*DLGMVA
Trigger: TGCGACCATGCCCAGGTCCCAATCACAGCAGAGGAC...ACACCTGTGTTTCCATGGAAATGCCACCGTGTCTGCTCCCAGGCCTCCCACTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000581396.5
CDS-3UTR CCA 90 bp CTCAGAGAAAAGAAGTGGCTGAAGCTGGTCCTGACTAGTGGGAGGCCTGGGAGCGTCCTCTGCTGTGATTaGGACCTGGGCATGGTCGCA +
Preference number: 4 (lower is better)
Translates to: LREKKWLKLVLTSGRPGSVLCCD*DLGMVA
Trigger: TGCGACCATGCCCAGGTCCCAATCACAGCAGAGGAC...GCTCCCAGGCCTCCCACTAGTCAGGACCAGCTTCAGCCACTTCTTTTCTCTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000581396.5
CDS-3UTR CCA 90 bp TGGGAGCAGACACGGTGGCATTTCCATGGAAACACAGGTGTGCAGGCCGTGTGGTCTAAGCCTGCAAGCTaGGAGGAGAGGGAAGATGGG +
Preference number: 4 (lower is better)
Translates to: WEQTRWHFHGNTGVQAVWSKPAS*EEREDG
Trigger: CCCATCTTCCCTCTCCTCCCAGCTTGCAGGCTTAGA...CCACACGGCCTGCACACCTGTGTTTCCATGGAAATGCCACCGTGTCTGCTCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000535933.5
ENST00000540946.5
ENST00000581396.5
CDS-3UTR CCA 90 bp CCCAGGAGGGCAGAATGCCTGAGAAGGTCGCTGAGCCAGGCAGAGGTGAGCACAGAGTTTCCTCTCGTCTaGGCAAACATGTCAAAGCCG +
Preference number: 4 (lower is better)
Translates to: PRRAECLRRSLSQAEVSTEFPLV*ANMSKP
Trigger: CGGCTTTGACATGTTTGCCCAGACGAGAGGAAACTC...TGTGCTCACCTCTGCCTGGCTCAGCGACCTTCTCAGGCATTCTGCCCTCCTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000478943.5
ENST00000581396.5
CDS-3UTR CCA 90 bp GAAACACAGGTGTGCAGGCCGTGTGGAGCTGGGGATGTAGGAGTGGCCAGTGCCGAGTTTCCTCTCGTCTaGGCAAACATGTCAAAGCCG +
Preference number: 4 (lower is better)
Translates to: ETQVCRPCGAGDVGVASAEFPLV*ANMSKP
Trigger: CGGCTTTGACATGTTTGCCCAGACGAGAGGAAACTC...GGCACTGGCCACTCCTACATCCCCAGCTCCACACGGCCTGCACACCTGTGTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000535933.5
ENST00000540946.5
ENST00000581396.5
CDS-3UTR CCA 90 bp CTAGTGGGAGGCCTGGGAGCAGACACGGTGGCATTTCCATGGAAACACAGGTGTTCTGCCCGCTCTTCCTaGGAGGAAACATGGGCAGAG +
Preference number: 4 (lower is better)
Translates to: LVGGLGADTVAFPWKHRCSARSS*EETWAE
Trigger: CTCTGCCCATGTTTCCTCCCAGGAAGAGCGGGCAGA...ACACCTGTGTTTCCATGGAAATGCCACCGTGTCTGCTCCCAGGCCTCCCACTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000581396.5
CDS-3UTR CCA 90 bp CATGGATCAGGAACCTGTGCTGACCTAGGCAGTGCATGCTGGAGGGGACAGGAGGAAAGACAGTCCGGGTaGTCTGCTCAGGAAGCACTG +
Preference number: 4 (lower is better)
Translates to: HGSGTCADLGSACWRGQEERQSG*SAQEAL
Trigger: CAGTGCTTCCTGAGCAGACCACCCGGACTGTCTTTC...CTCCTGTCCCCTCCAGCATGCACTGCCTAGGTCAGCACAGGTTCCTGATCCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR CCA 90 bp AGTGGGAGGCCTGGGAGCAGACACGGTGGCATTTCCATGGAAACACAGGTGTGCGAAAGACAGTCCGGGTaGTCTGCTCAGGAAGCACTG +
Preference number: 4 (lower is better)
Translates to: SGRPGSRHGGISMETQVCERQSG*SAQEAL
Trigger: CAGTGCTTCCTGAGCAGACCACCCGGACTGTCTTTC...GCACACCTGTGTTTCCATGGAAATGCCACCGTGTCTGCTCCCAGGCCTCCCACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000478943.5
ENST00000581396.5
CDS-3UTR CCA 90 bp AGCAGACACGGTGGCATTTCCATGGAAACACAGGTGTGCAGGCCGTGTGGAGCTTTCTCCATGGGCGGGTaGAGGAAAGACAGTCCGGGT +
Preference number: 4 (lower is better)
Translates to: SRHGGISMETQVCRPCGAFSMGG*RKDSPG
Trigger: ACCCGGACTGTCTTTCCTCCACCCGCCCATGGAGAA...AGCTCCACACGGCCTGCACACCTGTGTTTCCATGGAAATGCCACCGTGTCTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000478943.5
ENST00000581396.5
CDS-3UTR CCA 90 bp ATGAGTGCAGCACACCCTGCTCTTCCAGAGATGCCACAAAGCCCCTTCAGGGAGTTCTCCATGGGCGGGTaGAGGAAAGACAGTCCGGGT +
Preference number: 4 (lower is better)
Translates to: MSAAHPALPEMPQSPFREFSMGG*RKDSPG
Trigger: ACCCGGACTGTCTTTCCTCCACCCGCCCATGGAGAA...CTCCCTGAAGGGGCTTTGTGGCATCTCTGGAAGAGCAGGGTGTGCTGCACTCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000478943.5
ENST00000581396.5
CDS-3UTR CCA 90 bp AGACACGGTGGCATTTCCATGGAAACACAGGTGTGCAGGCCGTGTGGAGCTGGGCGTGCTCTTTCTCCATaGGCGGGTGGAGGAAAGACA +
Preference number: 4 (lower is better)
Translates to: RHGGISMETQVCRPCGAGRALSP*AGGGKT
Trigger: TGTCTTTCCTCCACCCGCCCATGGAGAAAGAGCACG...CCCAGCTCCACACGGCCTGCACACCTGTGTTTCCATGGAAATGCCACCGTGTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000478943.5
ENST00000581396.5
CDS-3UTR CCA 90 bp CCTGGCACAGGGTCCTGGGTCGGGCAGCACTTGCTCTTCACTGGAATAGTTCCTAGGGACACTCCGCTGTaGTGTGTGTATGGGAGACAG +
Preference number: 4 (lower is better)
Translates to: PGTGSWVGQHLLFTGIVPRDTPL*CVYGRQ
Trigger: CTGTCTCCCATACACACACCACAGCGGAGTGTCCCT...AGGAACTATTCCAGTGAAGAGCAAGTGCTGCCCGACCCAGGACCCTGTGCCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR CCA 90 bp TGGCAGGGCCTCAGAGACAACCCAAGTCACAACCCAAAGGCAGCCAAAGGGCTGCAACGACCATGTCGCTaGTCTCTTCTCCCGTCAAGC +
Preference number: 4 (lower is better)
Translates to: WQGLRDNPSHNPKAAKGLQRPCR*SLLPSS
Trigger: GCTTGACGGGAGAAGAGACCAGCGACATGGTCGTTG...CAGCCCTTTGGCTGCCTTTGGGTTGTGACTTGGGTTGTCTCTGAGGCCCTGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR CCA 90 bp CCCATGCACGCTGGTAAGCGAGCCAGTCATTCTCTCAGCCTGGCCACAGATGGCACTTTTTGGGACTCCTaGTTCCATGAGGCAGGGAGG +
Preference number: 4 (lower is better)
Translates to: PMHAGKRASHSLSLATDGTFWDS*FHEAGR
Trigger: CCTCCCTGCCTCATGGAACCAGGAGTCCCAAAAAGT...GCCATCTGTGGCCAGGCTGAGAGAATGACTGGCTCGCTTACCAGCGTGCATGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR CCA 90 bp CCCAGGAGGGCAGAATGCCTGAGAAGGTCGCTGAGCCAGGCAGAGGTGAGCACACAGCTTCACGCACTATaGAATCCCTGCTCCTTTCAG +
Preference number: 4 (lower is better)
Translates to: PRRAECLRRSLSQAEVSTQLHAL*NPCSFQ
Trigger: CTGAAAGGAGCAGGGATTCCATAGTGCGTGAAGCTG...TGTGCTCACCTCTGCCTGGCTCAGCGACCTTCTCAGGCATTCTGCCCTCCTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR CCA 90 bp AGTGGGAGGCCTGGGAGCAGACACGGTGGCATTTCCATGGAAACACAGGTGTGCAAGTGGAACCCACTCTaGGGCACCGGGGCTATACTT +
Preference number: 4 (lower is better)
Translates to: SGRPGSRHGGISMETQVCKWNPL*GTGAIL
Trigger: AAGTATAGCCCCGGTGCCCCAGAGTGGGTTCCACTT...GCACACCTGTGTTTCCATGGAAATGCCACCGTGTCTGCTCCCAGGCCTCCCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR CCA 90 bp AGGGGAGAGAGTCTCTGGCTGCAGTTGTCCCACCACTCAGAGAAAAGAAGTGGCGTGCTCCCCAGATGGTaGGGTCTGGGAGCAGAGATC +
Preference number: 4 (lower is better)
Translates to: RGESLWLQLSHHSEKRSGVLPRW*GLGAEI
Trigger: GATCTCTGCTCCCAGACCCCACCATCTGGGGAGCAC...GCCACTTCTTTTCTCTGAGTGGTGGGACAACTGCAGCCAGAGACTCTCTCCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR CCA 90 bp GGCATTTCCATGGAAACACAGGTGTGCAGGCCGTGTGGAGCTGGGGATGTAGGATCACGGAGAGGCTGGTaGGCCTTGAGAGTCCAGGTT +
Preference number: 4 (lower is better)
Translates to: GISMETQVCRPCGAGDVGSRRGW*ALRVQV
Trigger: AACCTGGACTCTCAAGGCCCACCAGCCTCTCCGTGA...TCCTACATCCCCAGCTCCACACGGCCTGCACACCTGTGTTTCCATGGAAATGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR CCA 90 bp CCTGGCACAGGGTCCTGGGTCGGGCAGCACTTGCTCTTCACTGGAATAGTTCCTAGGAGGACAGACGGATaGTCACCTTTCCCTCTAGCC +
Preference number: 4 (lower is better)
Translates to: PGTGSWVGQHLLFTGIVPRRTDG*SPFPLA
Trigger: GGCTAGAGGGAAAGGTGACCATCCGTCTGTCCTCCT...AGGAACTATTCCAGTGAAGAGCAAGTGCTGCCCGACCCAGGACCCTGTGCCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR CCA 90 bp CCCATGCACGCTGGTAAGCGAGCCAGTCATTCTCTCAGCCTGGCCACAGATGGCACACTTCTCTCTGGGTaGGGAAGGCCTACTGTAACC +
Preference number: 4 (lower is better)
Translates to: PMHAGKRASHSLSLATDGTLLSG*GRPTVT
Trigger: GGTTACAGTAGGCCTTCCCCACCCAGAGAGAAGTGT...GCCATCTGTGGCCAGGCTGAGAGAATGACTGGCTCGCTTACCAGCGTGCATGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR CCA 90 bp AGCCTGGGCTGGCAGCTGAATGATGGAGAGAGGGTCAAGAAGGTGAGAGACCCCCTCTCCGGGAGAGCCTaGAGGTATGGACAGACAGAA +
Preference number: 4 (lower is better)
Translates to: SLGWQLNDGERVKKVRDPLSGRA*RYGQTE
Trigger: TTCTGTCTGTCCATACCTCCAGGCTCTCCCGGAGAG...GGGGTCTCTCACCTTCTTGACCCTCTCTCCATCATTCAGCTGCCAGCCCAGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR CCA 90 bp GGTGAAGGGTACATGGGACCTTGGGTTTCTGCTTACCCTACTGAGCCCCAAGCATGGGTTCACCCTGCATaGCTGCACCCTCCTGCTTCC +
Preference number: 4 (lower is better)
Translates to: GEGYMGPWVSAYPTEPQAWVHPA*LHPPAS
Trigger: GGAAGCAGGAGGGTGCAGCCATGCAGGGTGAACCCA...TGCTTGGGGCTCAGTAGGGTAAGCAGAAACCCAAGGTCCCATGTACCCTTCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468944.1
CDS-3UTR CCA 90 bp CCTGGGAGCAGACACGGTGGCATTTCCATGGAAACACAGGTGTGCAGGCCGTGTCTCCTCTGTTGTGAATaGCTCATGTCCCCAGGCCAG +
Preference number: 4 (lower is better)
Translates to: PGSRHGGISMETQVCRPCLLCCE*LMSPGQ
Trigger: CTGGCCTGGGGACATGAGCCATTCACAACAGAGGAG...ACACGGCCTGCACACCTGTGTTTCCATGGAAATGCCACCGTGTCTGCTCCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478943.5
CDS-3UTR CCA 90 bp CTGGGAGCAGACACGGTGGCATTTCCATGGAAACACAGGTGTGCAGGCCGTGTGCCTGGCAATCCGCTGTaGTGTGTGTATGGGAGACAG +
Preference number: 4 (lower is better)
Translates to: LGADTVAFPWKHRCAGRVPGNPL*CVYGRQ
Trigger: CTGTCTCCCATACACACACCACAGCGGATTGCCAGG...CACACGGCCTGCACACCTGTGTTTCCATGGAAATGCCACCGTGTCTGCTCCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535933.5
CDS-3UTR CCA 90 bp CTCAGAGAAAAGAAGTGGCTGAAGCTGGTCCTGACTAGTGGGAGGCCTGGGAGCGTTCACTCCGCAGCCTaGCAATCCGCTGTGGTGTGT +
Preference number: 4 (lower is better)
Translates to: LREKKWLKLVLTSGRPGSVHSAA*QSAVVC
Trigger: ACACACCACAGCGGATTGCCAGGCTGCGGAGTGAAC...GCTCCCAGGCCTCCCACTAGTCAGGACCAGCTTCAGCCACTTCTTTTCTCTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535933.5
CDS-3UTR TCA 90 bp AGCCTGGGCTGGCAGCTGAATGATGGAGAGAGGGTCAAGAAGGTGAGAGACCCCGTTCTGAATTGGCTGTaGTGGGGCCAGTCACACTCA +
Preference number: 4 (lower is better)
Translates to: SLGWQLNDGERVKKVRDPVLNWL*WGQSHS
Trigger: TGAGTGTGACTGGCCCCATCACAGCCAATTCAGAAC...GGGGTCTCTCACCTTCTTGACCCTCTCTCCATCATTCAGCTGCCAGCCCAGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000581396.5
CDS-3UTR TCA 90 bp GGTGGCATTTCCATGGAAACACAGGTGTGCAGGCCGTGTGGAGCTGGGGATGTACCTGGCAATCTGTTCTaGATTGGCTGTGATGGGGCC +
Preference number: 4 (lower is better)
Translates to: GGISMETQVCRPCGAGDVPGNLF*IGCDGA
Trigger: GGCCCCATCACAGCCAATTCAGAACAGATTGCCAGG...TACATCCCCAGCTCCACACGGCCTGCACACCTGTGTTTCCATGGAAATGCCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000581396.5
CDS-3UTR TCA 90 bp AGTGGGAGGCCTGGGAGCAGACACGGTGGCATTTCCATGGAAACACAGGTGTGCCAACTCCAGATCAGATaGATCCTCCTGTCCAGGGAC +
Preference number: 4 (lower is better)
Translates to: SGRPGSRHGGISMETQVCQLQIR*ILLSRD
Trigger: GTCCCTGGACAGGAGGATTCATCTGATCTGGAGTTG...GCACACCTGTGTTTCCATGGAAATGCCACCGTGTCTGCTCCCAGGCCTCCCACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000535933.5
ENST00000540946.5
ENST00000581396.5
CDS-3UTR TCA 90 bp TGGGAGCAGACACGGTGGCATTTCCATGGAAACACAGGTGTGCAGGCCGTGTGGCAACTCCAGATCAGATaGATCCTCCTGTCCAGGGAC +
Preference number: 4 (lower is better)
Translates to: WEQTRWHFHGNTGVQAVWQLQIR*ILLSRD
Trigger: GTCCCTGGACAGGAGGATTCATCTGATCTGGAGTTG...CCACACGGCCTGCACACCTGTGTTTCCATGGAAATGCCACCGTGTCTGCTCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000535933.5
ENST00000540946.5
ENST00000581396.5
CDS-3UTR TCA 90 bp CAGTTTGGTTTATTGGTAGTGTCGTCTCAGCAGCGTGCCACATGGCCACCATCTTGGACACGCGGGAGATaGGCTCCACGATGCGCTGCT +
Preference number: 4 (lower is better)
Translates to: QFGLLVVSSQQRATWPPSWTRGR*APRCAA
Trigger: AGCAGCGCATCGTGGAGCTCATCTCCCGCGTGTCCA...AGATGGTGGCCATGTGGCACGCTGCTGAGACGACACTACCAATAAACCAAACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000478943.5
ENST00000581396.5
CDS-3UTR TCA 90 bp CTGGGCTGGCAGCTGAATGATGGAGAGAGGGTCAAGAAGGTGAGAGACCCCCACCCATTACTGGCATTTTaGACGGATCGGCCAGACCTG +
Preference number: 4 (lower is better)
Translates to: LGWQLNDGERVKKVRDPHPLLAF*TDRPDL
Trigger: CAGGTCTGGCCGATCCGTTCAAAATGCCAGTAATGG...GTGGGGGTCTCTCACCTTCTTGACCCTCTCTCCATCATTCAGCTGCCAGCCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000478943.5
ENST00000581396.5
CDS-3UTR TCA 90 bp CTGGGAGCAGACACGGTGGCATTTCCATGGAAACACAGGTGTGCAGGCCGTGTGCCATTACTGGCATTTTaGACGGATCGGCCAGACCTG +
Preference number: 4 (lower is better)
Translates to: LGADTVAFPWKHRCAGRVPLLAF*TDRPDL
Trigger: CAGGTCTGGCCGATCCGTTCAAAATGCCAGTAATGG...CACACGGCCTGCACACCTGTGTTTCCATGGAAATGCCACCGTGTCTGCTCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000535933.5
ENST00000540946.5
ENST00000581396.5
CDS-3UTR TCA 90 bp AGTGGGAGGCCTGGGAGCAGACACGGTGGCATTTCCATGGAAACACAGGTGTGCCCATTACTGGCATTTTaGACGGATCGGCCAGACCTG +
Preference number: 4 (lower is better)
Translates to: SGRPGSRHGGISMETQVCPLLAF*TDRPDL
Trigger: CAGGTCTGGCCGATCCGTTCAAAATGCCAGTAATGG...GCACACCTGTGTTTCCATGGAAATGCCACCGTGTCTGCTCCCAGGCCTCCCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000535933.5
ENST00000540946.5
ENST00000581396.5
CDS-3UTR TCA 90 bp CCCATGCACGCTGGTAAGCGAGCCAGTCATTCTCTCAGCCTGGCCACAGATGGCATTACATTGCTGGAGTaGACTGAGGGTGCCACTGAC +
Preference number: 4 (lower is better)
Translates to: PMHAGKRASHSLSLATDGITLLE*TEGATD
Trigger: GTCAGTGGCACCCTCAGTTCACTCCAGCAATGTAAT...GCCATCTGTGGCCAGGCTGAGAGAATGACTGGCTCGCTTACCAGCGTGCATGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR TCA 90 bp GGAGGCCTGGGAGCAGACACGGTGGCATTTCCATGGAAACACAGGTGTGCAGGCATTACATTGCTGGAGTaGACTGAGGGTGCCACTGAC +
Preference number: 4 (lower is better)
Translates to: GGLGADTVAFPWKHRCAGITLLE*TEGATD
Trigger: GTCAGTGGCACCCTCAGTTCACTCCAGCAATGTAAT...GCCTGCACACCTGTGTTTCCATGGAAATGCCACCGTGTCTGCTCCCAGGCCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000535933.5
ENST00000540946.5
ENST00000581396.5
CDS-3UTR TCA 90 bp TGTCACAAGGTGACAAGTCCAAGGAGTGAGACCAGGCCCATGAGTGCAGCACACCCTTCAGGTCGGTCCTaGGCCACACCTCAATGTCGT +
Preference number: 4 (lower is better)
Translates to: CHKVTSPRSETRPMSAAHPSGRS*ATPQCR
Trigger: ACGACATTGAGGTGTGGCTCAGGACCGACCTGAAGG...GTGTGCTGCACTCATGGGCCTGGTCTCACTCCTTGGACTTGTCACCTTGTGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000478943.5
ENST00000581396.5
CDS-3UTR TCA 90 bp CAGACACGGTGGCATTTCCATGGAAACACAGGTGTGCAGGCCGTGTGGAGCTGGTTTGCTGCTGGCTCTTaGGGCAGATGTGTGAGGCTA +
Preference number: 4 (lower is better)
Translates to: QTRWHFHGNTGVQAVWSWFAAGS*GRCVRL
Trigger: TAGCCTCACACATCTGCCTCAAGAGCCAGCAGCAAA...CCAGCTCCACACGGCCTGCACACCTGTGTTTCCATGGAAATGCCACCGTGTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR TCA 90 bp CTCAGAGAAAAGAAGTGGCTGAAGCTGGTCCTGACTAGTGGGAGGCCTGGGAGCCAGGAGACACACCAGTaGGGACACGGGATGGGAATA +
Preference number: 4 (lower is better)
Translates to: LREKKWLKLVLTSGRPGSQETHQ*GHGMGI
Trigger: TATTCCCATCCCGTGTCCTCACTGGTGTGTCTCCTG...GCTCCCAGGCCTCCCACTAGTCAGGACCAGCTTCAGCCACTTCTTTTCTCTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR TCA 90 bp GGCATTTCCATGGAAACACAGGTGTGCAGGCCGTGTGGAGCTGGGGATGTAGGAATCAGGAACCTGTGCTaGCCTAGGCAGTGCATGCTG +
Preference number: 4 (lower is better)
Translates to: GISMETQVCRPCGAGDVGIRNLC*PRQCML
Trigger: CAGCATGCACTGCCTAGGTCAGCACAGGTTCCTGAT...TCCTACATCCCCAGCTCCACACGGCCTGCACACCTGTGTTTCCATGGAAATGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR TCA 90 bp GTGGGAGGGGAGAGAGTCTCTGGCTGCAGTTGTCCCACCACTCAGAGAAAAGAAGAGCACTTCAGGGGCTaGCAGACAATGTCTCTGGGG +
Preference number: 4 (lower is better)
Translates to: VGGERVSGCSCPTTQRKEEHFRG*QTMSLG
Trigger: CCCCAGAGACATTGTCTGTCAGCCCCTGAAGTGCTC...TTCTTTTCTCTGAGTGGTGGGACAACTGCAGCCAGAGACTCTCTCCCCTCCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR GCA 90 bp GTGGGAGGGGAGAGAGTCTCTGGCTGCAGTTGTCCCACCACTCAGAGAAAAGAACAGGGAGCCATCTGTTaGCTTTTCGAGGCACTGCCC +
Preference number: 4 (lower is better)
Translates to: VGGERVSGCSCPTTQRKEQGAIC*LFEALP
Trigger: GGGCAGTGCCTCGAAAAGGCAACAGATGGCTCCCTG...TTCTTTTCTCTGAGTGGTGGGACAACTGCAGCCAGAGACTCTCTCCCCTCCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000581396.5
CDS-3UTR GCA 90 bp AGTGGGAGGCCTGGGAGCAGACACGGTGGCATTTCCATGGAAACACAGGTGTGCCATAGGTTACCGTCTTaGGCTGCTCAGCCAAGGAGT +
Preference number: 4 (lower is better)
Translates to: SGRPGSRHGGISMETQVCHRLPS*AAQPRS
Trigger: ACTCCTTGGCTGAGCAGCGCAAGACGGTAACCTATG...GCACACCTGTGTTTCCATGGAAATGCCACCGTGTCTGCTCCCAGGCCTCCCACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000535933.5
ENST00000540946.5
ENST00000581396.5
CDS-3UTR GCA 90 bp CCTGGGAGCAGACACGGTGGCATTTCCATGGAAACACAGGTGTGCAGGCCGTGTCATAGGTTACCGTCTTaGGCTGCTCAGCCAAGGAGT +
Preference number: 4 (lower is better)
Translates to: PGSRHGGISMETQVCRPCHRLPS*AAQPRS
Trigger: ACTCCTTGGCTGAGCAGCGCAAGACGGTAACCTATG...ACACGGCCTGCACACCTGTGTTTCCATGGAAATGCCACCGTGTCTGCTCCCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000535933.5
ENST00000540946.5
ENST00000581396.5
CDS-3UTR GCA 90 bp CAGACACGGTGGCATTTCCATGGAAACACAGGTGTGCAGGCCGTGTGGAGCTGGCATAGGTTACCGTCTTaGGCTGCTCAGCCAAGGAGT +
Preference number: 4 (lower is better)
Translates to: QTRWHFHGNTGVQAVWSWHRLPS*AAQPRS
Trigger: ACTCCTTGGCTGAGCAGCGCAAGACGGTAACCTATG...CCAGCTCCACACGGCCTGCACACCTGTGTTTCCATGGAAATGCCACCGTGTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000535933.5
ENST00000540946.5
ENST00000581396.5
CDS-3UTR GCA 90 bp GTTTGGTTTATTGGTAGTGTCGTCTCAGCAGCGTGCCACATGGCCACCATCTGCGGCAAACCACAGAGCTaGTCACAGGGCGAAGAGGGC +
Preference number: 4 (lower is better)
Translates to: VWFIGSVVSAACHMATICGKPQS*SQGEEG
Trigger: GCCCTCTTCGCCCTGTGAGCAGCTCTGTGGTTTGCC...GCAGATGGTGGCCATGTGGCACGCTGCTGAGACGACACTACCAATAAACCAAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000478943.5
ENST00000581396.5
CDS-3UTR GCA 90 bp AGGGGAGAGAGTCTCTGGCTGCAGTTGTCCCACCACTCAGAGAAAAGAAGTGGCATGGAAACACAGGTGTaGAGGCCGTGTGGAGCTGGG +
Preference number: 4 (lower is better)
Translates to: RGESLWLQLSHHSEKRSGMETQV*RPCGAG
Trigger: CCCAGCTCCACACGGCCTGCACACCTGTGTTTCCAT...GCCACTTCTTTTCTCTGAGTGGTGGGACAACTGCAGCCAGAGACTCTCTCCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000581396.5
CDS-3UTR GCA 90 bp TGGCATTTCCATGGAAACACAGGTGTGCAGGCCGTGTGGAGCTGGGGATGTAGGGAGAGAGTCTCTGGCTaGAGTTGTCCCACCACTCAG +
Preference number: 4 (lower is better)
Translates to: WHFHGNTGVQAVWSWGCRERVSG*SCPTTQ
Trigger: CTGAGTGGTGGGACAACTGCAGCCAGAGACTCTCTC...CCTACATCCCCAGCTCCACACGGCCTGCACACCTGTGTTTCCATGGAAATGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000581396.5
CDS-3UTR GCA 90 bp GTTTGGTTTATTGGTAGTGTCGTCTCAGCAGCGTGCCACATGGCCACCATCTGCGACCAGGCCCATGAGTaGAGCACACCCTGCTCTTCC +
Preference number: 4 (lower is better)
Translates to: VWFIGSVVSAACHMATICDQAHE*STPCSS
Trigger: GGAAGAGCAGGGTGTGCTGCACTCATGGGCCTGGTC...GCAGATGGTGGCCATGTGGCACGCTGCTGAGACGACACTACCAATAAACCAAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000478943.5
ENST00000581396.5
CDS-3UTR GCA 90 bp CAGTTTGGTTTATTGGTAGTGTCGTCTCAGCAGCGTGCCACATGGCCACCATCTCTGCGGGCTGCCTGCTaGCCTCCCAATTGTCCTTGG +
Preference number: 4 (lower is better)
Translates to: QFGLLVVSSQQRATWPPSLRAAC*PPNCPW
Trigger: CCAAGGACAATTGGGAGGGCAGCAGGCAGCCCGCAG...AGATGGTGGCCATGTGGCACGCTGCTGAGACGACACTACCAATAAACCAAACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000478943.5
ENST00000581396.5
CDS-3UTR GCA 90 bp AGAGTCTCTGGCTGCAGTTGTCCCACCACTCAGAGAAAAGAAGTGGCTGAAGCTCCACCATCTGCGGGCTaGCTGCTGCCCTCCCAATTG +
Preference number: 4 (lower is better)
Translates to: RVSGCSCPTTQRKEVAEAPPSAG*LLPSQL
Trigger: CAATTGGGAGGGCAGCAGGCAGCCCGCAGATGGTGG...AGCTTCAGCCACTTCTTTTCTCTGAGTGGTGGGACAACTGCAGCCAGAGACTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000478943.5
ENST00000581396.5
CDS-3UTR GCA 90 bp CCTGGGAGCAGACACGGTGGCATTTCCATGGAAACACAGGTGTGCAGGCCGTGTAAAGGCATCAGCCCATaGCTGGATCAGAGCAAGCAC +
Preference number: 4 (lower is better)
Translates to: PGSRHGGISMETQVCRPCKGISP*LDQSKH
Trigger: GTGCTTGCTCTGATCCAGGCATGGGCTGATGCCTTT...ACACGGCCTGCACACCTGTGTTTCCATGGAAATGCCACCGTGTCTGCTCCCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000535933.5
CDS-3UTR GCA 90 bp GAGCCTGCAGTGTGTGCGTGGCAGTTTGGTTTATTGGTAGTGTCGTCTCAGCAGACACTGGGTCTGGGATaGAGTGCTGAGGCTGCGGAG +
Preference number: 4 (lower is better)
Translates to: EPAVCAWQFGLLVVSSQQTLGLG*SAEAAE
Trigger: CTCCGCAGCCTCAGCACTGCATCCCAGACCCAGTGT...CTGCTGAGACGACACTACCAATAAACCAAACTGCCACGCACACACTGCAGGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR GCA 90 bp GGTGGCATTTCCATGGAAACACAGGTGTGCAGGCCGTGTGGAGCTGGGGATGTACATAGCGCCATTCTCTaGCGCCCAGTGGCCAAAAAG +
Preference number: 4 (lower is better)
Translates to: GGISMETQVCRPCGAGDVHSAIL*RPVAKK
Trigger: CTTTTTGGCCACTGGGCGGCAGAGAATGGCGCTATG...TACATCCCCAGCTCCACACGGCCTGCACACCTGTGTTTCCATGGAAATGCCACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR GCA 90 bp GAAAAGAAGTGGCTGAAGCTGGTCCTGACTAGTGGGAGGCCTGGGAGCAGACACAAGCTCCTTGTCCCATaGACGCTGGTAAGCGAGCCA +
Preference number: 4 (lower is better)
Translates to: EKKWLKLVLTSGRPGSRHKLLVP*TLVSEP
Trigger: TGGCTCGCTTACCAGCGTGCATGGGACAAGGAGCTT...GTGTCTGCTCCCAGGCCTCCCACTAGTCAGGACCAGCTTCAGCCACTTCTTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR GCA 90 bp AGCAGACACGGTGGCATTTCCATGGAAACACAGGTGTGCAGGCCGTGTGGAGCTCAGGCTGCAAGCAAGTaGTCCTCCACACTGCTCTTC +
Preference number: 4 (lower is better)
Translates to: SRHGGISMETQVCRPCGAQAASK*SSTLLF
Trigger: GAAGAGCAGTGTGGAGGAGCACTTGCTTGCAGCCTG...AGCTCCACACGGCCTGCACACCTGTGTTTCCATGGAAATGCCACCGTGTCTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR GCA 90 bp CTAGTGGGAGGCCTGGGAGCAGACACGGTGGCATTTCCATGGAAACACAGGTGTCAGGCTGCAAGCAAGTaGTCCTCCACACTGCTCTTC +
Preference number: 4 (lower is better)
Translates to: LVGGLGADTVAFPWKHRCQAASK*SSTLLF
Trigger: GAAGAGCAGTGTGGAGGAGCACTTGCTTGCAGCCTG...ACACCTGTGTTTCCATGGAAATGCCACCGTGTCTGCTCCCAGGCCTCCCACTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR GCA 90 bp TGGCAGTTTGGTTTATTGGTAGTGTCGTCTCAGCAGCGTGCCACATGGCCACCACCCCAAAGCCGACAGTaGAGAAGCTCCCAGGGACCA +
Preference number: 4 (lower is better)
Translates to: WQFGLLVVSSQQRATWPPPQSRQ*RSSQGP
Trigger: TGGTCCCTGGGAGCTTCTGCACTGTCGGCTTTGGGG...TGGTGGCCATGTGGCACGCTGCTGAGACGACACTACCAATAAACCAAACTGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR CCA 90 bp GCCATCCTGAATGCTCCCCAACGACCATGTCGCTGGTCTCTTCTCCCGTCAAGCTCTTCAGGGCTCGAATaGCATCCTTTGGCCCTTCCT +
Preference number: 4 (lower is better)
Translates to: AILNAPQRPCRWSLLPSSSSGLE*HPLALP
Trigger: AGGAAGGGCCAAAGGATGCCATTCGAGCCCTGAAGA...GCTTGACGGGAGAAGAGACCAGCGACATGGTCGTTGGGGAGCATTCAGGATGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR CCA 90 bp CTGGGAGCAGACACGGTGGCATTTCCATGGAAACACAGGTGTGCAGGCCGTGTGTCTTCAGGGCTCGAATaGCATCCTTTGGCCCTTCCT +
Preference number: 4 (lower is better)
Translates to: LGADTVAFPWKHRCAGRVSSGLE*HPLALP
Trigger: AGGAAGGGCCAAAGGATGCCATTCGAGCCCTGAAGA...CACACGGCCTGCACACCTGTGTTTCCATGGAAATGCCACCGTGTCTGCTCCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000535933.5
ENST00000540946.5
ENST00000581396.5
CDS-3UTR CCA 90 bp CATGGATCAGGAACCTGTGCTGACCTAGGCAGTGCATGCTGGAGGGGACAGGAGTCTTCAGGGCTCGAATaGCATCCTTTGGCCCTTCCT +
Preference number: 4 (lower is better)
Translates to: HGSGTCADLGSACWRGQESSGLE*HPLALP
Trigger: AGGAAGGGCCAAAGGATGCCATTCGAGCCCTGAAGA...CTCCTGTCCCCTCCAGCATGCACTGCCTAGGTCAGCACAGGTTCCTGATCCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR CCA 90 bp GGTGGCATTTCCATGGAAACACAGGTGTGCAGGCCGTGTGGAGCTGGGGATGTATTGGCCACAAGGATGTaGAAGCGGTGGCCACAGTTC +
Preference number: 4 (lower is better)
Translates to: GGISMETQVCRPCGAGDVLATRM*KRWPQF
Trigger: GAACTGTGGCCACCGCTTCCACATCCTTGTGGCCAA...TACATCCCCAGCTCCACACGGCCTGCACACCTGTGTTTCCATGGAAATGCCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000535933.5
ENST00000540946.5
CDS-3UTR CCA 90 bp TGTCACAAGGTGACAAGTCCAAGGAGTGAGACCAGGCCCATGAGTGCAGCACACGGGCATGGTCGCAGCTaGATCCACTTCAGGGACACT +
Preference number: 4 (lower is better)
Translates to: CHKVTSPRSETRPMSAAHGHGRS*IHFRDT
Trigger: AGTGTCCCTGAAGTGGATCCAGCTGCGACCATGCCC...GTGTGCTGCACTCATGGGCCTGGTCTCACTCCTTGGACTTGTCACCTTGTGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000581396.5
CDS-3UTR CCA 90 bp AGGGGAGAGAGTCTCTGGCTGCAGTTGTCCCACCACTCAGAGAAAAGAAGTGGCGCTGTGATTGGGACCTaGGCATGGTCGCAGCTGGAT +
Preference number: 4 (lower is better)
Translates to: RGESLWLQLSHHSEKRSGAVIGT*AWSQLD
Trigger: ATCCAGCTGCGACCATGCCCAGGTCCCAATCACAGC...GCCACTTCTTTTCTCTGAGTGGTGGGACAACTGCAGCCAGAGACTCTCTCCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000581396.5
CDS-3UTR CCA 90 bp AGCAGACACGGTGGCATTTCCATGGAAACACAGGTGTGCAGGCCGTGTGGAGCTTCTAAGCCTGCAAGCTaGGAGGAGAGGGAAGATGGG +
Preference number: 4 (lower is better)
Translates to: SRHGGISMETQVCRPCGASKPAS*EEREDG
Trigger: CCCATCTTCCCTCTCCTCCCAGCTTGCAGGCTTAGA...AGCTCCACACGGCCTGCACACCTGTGTTTCCATGGAAATGCCACCGTGTCTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000535933.5
ENST00000540946.5
ENST00000581396.5
CDS-3UTR CCA 90 bp GGTGGCATTTCCATGGAAACACAGGTGTGCAGGCCGTGTGGAGCTGGGGATGTATCTAAGCCTGCAAGCTaGGAGGAGAGGGAAGATGGG +
Preference number: 4 (lower is better)
Translates to: GGISMETQVCRPCGAGDVSKPAS*EEREDG
Trigger: CCCATCTTCCCTCTCCTCCCAGCTTGCAGGCTTAGA...TACATCCCCAGCTCCACACGGCCTGCACACCTGTGTTTCCATGGAAATGCCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000535933.5
ENST00000540946.5
ENST00000581396.5
CDS-3UTR CCA 90 bp CTAGTGGGAGGCCTGGGAGCAGACACGGTGGCATTTCCATGGAAACACAGGTGTTCTAAGCCTGCAAGCTaGGAGGAGAGGGAAGATGGG +
Preference number: 4 (lower is better)
Translates to: LVGGLGADTVAFPWKHRCSKPAS*EEREDG
Trigger: CCCATCTTCCCTCTCCTCCCAGCTTGCAGGCTTAGA...ACACCTGTGTTTCCATGGAAATGCCACCGTGTCTGCTCCCAGGCCTCCCACTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000535933.5
ENST00000540946.5
ENST00000581396.5
CDS-3UTR CCA 90 bp TGGGAGCAGACACGGTGGCATTTCCATGGAAACACAGGTGTGCAGGCCGTGTGGCGGGGATTACATTGCTaGAGTGAACTGAGGGTGCCA +
Preference number: 4 (lower is better)
Translates to: WEQTRWHFHGNTGVQAVWRGLHC*SELRVP
Trigger: TGGCACCCTCAGTTCACTCCAGCAATGTAATCCCCG...CCACACGGCCTGCACACCTGTGTTTCCATGGAAATGCCACCGTGTCTGCTCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000535933.5
ENST00000540946.5
ENST00000581396.5
CDS-3UTR CCA 90 bp ATGGAAACACAGGTGTGCAGGCCGTGTGGAGCTGGGGATGTAGGAGTGGCCAGTCGGGGATTACATTGCTaGAGTGAACTGAGGGTGCCA +
Preference number: 4 (lower is better)
Translates to: METQVCRPCGAGDVGVASRGLHC*SELRVP
Trigger: TGGCACCCTCAGTTCACTCCAGCAATGTAATCCCCG...ACTGGCCACTCCTACATCCCCAGCTCCACACGGCCTGCACACCTGTGTTTCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000535933.5
ENST00000540946.5
ENST00000581396.5
CDS-3UTR CCA 90 bp GGCCTGGGAGCAGACACGGTGGCATTTCCATGGAAACACAGGTGTGCAGGCCGTGAGTTTCCTCTCGTCTaGGCAAACATGTCAAAGCCG +
Preference number: 4 (lower is better)
Translates to: GLGADTVAFPWKHRCAGREFPLV*ANMSKP
Trigger: CGGCTTTGACATGTTTGCCCAGACGAGAGGAAACTC...ACGGCCTGCACACCTGTGTTTCCATGGAAATGCCACCGTGTCTGCTCCCAGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000535933.5
ENST00000540946.5
ENST00000581396.5
CDS-3UTR CCA 90 bp AGCAGACACGGTGGCATTTCCATGGAAACACAGGTGTGCAGGCCGTGTGGAGCTAGGGACACTCCGCTGTaGTGTGTGTATGGGAGACAG +
Preference number: 4 (lower is better)
Translates to: SRHGGISMETQVCRPCGARDTPL*CVYGRQ
Trigger: CTGTCTCCCATACACACACCACAGCGGAGTGTCCCT...AGCTCCACACGGCCTGCACACCTGTGTTTCCATGGAAATGCCACCGTGTCTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR CCA 90 bp GTGGGAGGGGAGAGAGTCTCTGGCTGCAGTTGTCCCACCACTCAGAGAAAAGAAATGAGGCAGGGAGGCTaGCTCTTCCCTCTGAGGACA +
Preference number: 4 (lower is better)
Translates to: VGGERVSGCSCPTTQRKEMRQGG*LFPLRT
Trigger: TGTCCTCAGAGGGAAGAGCCAGCCTCCCTGCCTCAT...TTCTTTTCTCTGAGTGGTGGGACAACTGCAGCCAGAGACTCTCTCCCCTCCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR CCA 90 bp GGCTGGCAGCTGAATGATGGAGAGAGGGTCAAGAAGGTGAGAGACCCCCACCATGTCATTCTCTCAGCCTaGCCACAGATGGCCTGCTCA +
Preference number: 4 (lower is better)
Translates to: GWQLNDGERVKKVRDPHHVILSA*PQMACS
Trigger: TGAGCAGGCCATCTGTGGCCAGGCTGAGAGAATGAC...ATGGTGGGGGTCTCTCACCTTCTTGACCCTCTCTCCATCATTCAGCTGCCAGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR CCA 90 bp AGAGGGTATCTGGAAGGAGGGCCAGTGGGGTGGATGGATGCTCTGAGCCTCGGGACAATGTCTCTGGGGTaGAAACACTTCTCTCTGGGT +
Preference number: 4 (lower is better)
Translates to: RGYLEGGPVGWMDALSLGTMSLG*KHFSLG
Trigger: ACCCAGAGAGAAGTGTTTCCACCCCAGAGACATTGT...CCCGAGGCTCAGAGCATCCATCCACCCCACTGGCCCTCCTTCCAGATACCCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR CCA 90 bp AGAGTCTCTGGCTGCAGTTGTCCCACCACTCAGAGAAAAGAAGTGGCTGAAGCTGATGGCTGCTCCCTATaGCTGGTGGCCGCAGGGGAA +
Preference number: 4 (lower is better)
Translates to: RVSGCSCPTTQRKEVAEADGCSL*LVAAGE
Trigger: TTCCCCTGCGGCCACCAGCCATAGGGAGCAGCCATC...AGCTTCAGCCACTTCTTTTCTCTGAGTGGTGGGACAACTGCAGCCAGAGACTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR CCA 90 bp AGCAGACACGGTGGCATTTCCATGGAAACACAGGTGTGCAGGCCGTGTGGAGCTGTCGTCCATGACAGATaGCTGCGCAACGGGGATCAT +
Preference number: 4 (lower is better)
Translates to: SRHGGISMETQVCRPCGAVVHDR*LRNGDH
Trigger: ATGATCCCCGTTGCGCAGCCATCTGTCATGGACGAC...AGCTCCACACGGCCTGCACACCTGTGTTTCCATGGAAATGCCACCGTGTCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535933.5
CDS-3UTR CCA 90 bp ATGGAAACACAGGTGTGCAGGCCGTGTGGAGCTGGGGATGTAGGAGTGGCCAGTGTTCACTCCGCAGCCTaGCAATCTGGATCAGAGCAA +
Preference number: 4 (lower is better)
Translates to: METQVCRPCGAGDVGVASVHSAA*QSGSEQ
Trigger: TTGCTCTGATCCAGATTGCCAGGCTGCGGAGTGAAC...ACTGGCCACTCCTACATCCCCAGCTCCACACGGCCTGCACACCTGTGTTTCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540946.5
3UTR CAA 72 bp CAGCCCCTAGCTGCTCTGCCTGCCTTCAGGATCAGCTaGGGGAGAGAGTATAAATTGGTGGCCAGAGGACCT +
Preference number: 4 (lower is better)
Translates to: QPLAALPAFRIS*GREYKLVARGP
Trigger: AGGTCCTCTGGCCACCAATTTATACTCTCTCCCCAAGCTGATCCTGAAGGCAGGCAGAGCAGCTAGGGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR TCA 90 bp AGAGTCTCTGGCTGCAGTTGTCCCACCACTCAGAGAAAAGAAGTGGCTGAAGCTAGTTCCGGTTCCCGTTaGGCCGCTTCTTCAGGGCTC +
Preference number: 4 (lower is better)
Translates to: RVSGCSCPTTQRKEVAEASSGSR*AASSGL
Trigger: GAGCCCTGAAGAAGCGGCTCAACGGGAACCGGAACT...AGCTTCAGCCACTTCTTTTCTCTGAGTGGTGGGACAACTGCAGCCAGAGACTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000581396.5
CDS-3UTR TCA 90 bp TGTCACAAGGTGACAAGTCCAAGGAGTGAGACCAGGCCCATGAGTGCAGCACACACTTGTCCTCTGCTGTaGTTGGGACCTGGGCATGGT +
Preference number: 4 (lower is better)
Translates to: CHKVTSPRSETRPMSAAHTCPLL*LGPGHG
Trigger: ACCATGCCCAGGTCCCAATCACAGCAGAGGACAAGT...GTGTGCTGCACTCATGGGCCTGGTCTCACTCCTTGGACTTGTCACCTTGTGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000581396.5
CDS-3UTR TCA 90 bp CTCAGAGAAAAGAAGTGGCTGAAGCTGGTCCTGACTAGTGGGAGGCCTGGGAGCCAACTCCAGATCAGATaGATCCTCCTGTCCAGGGAC +
Preference number: 4 (lower is better)
Translates to: LREKKWLKLVLTSGRPGSQLQIR*ILLSRD
Trigger: GTCCCTGGACAGGAGGATTCATCTGATCTGGAGTTG...GCTCCCAGGCCTCCCACTAGTCAGGACCAGCTTCAGCCACTTCTTTTCTCTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000535933.5
ENST00000581396.5
CDS-3UTR TCA 90 bp GGCCTGGGAGCAGACACGGTGGCATTTCCATGGAAACACAGGTGTGCAGGCCGTGAAGGAAGACGTTGTTaGGGTCATCGTTCACATGCA +
Preference number: 4 (lower is better)
Translates to: GLGADTVAFPWKHRCAGREGRRC*GHRSHA
Trigger: TGCATGTGAACGATGACCTCAACAACGTCTTCCTTC...ACGGCCTGCACACCTGTGTTTCCATGGAAATGCCACCGTGTCTGCTCCCAGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000535933.5
ENST00000540946.5
ENST00000581396.5
CDS-3UTR TCA 90 bp GGCTGGCAGCTGAATGATGGAGAGAGGGTCAAGAAGGTGAGAGACCCCCACCATCCATTACTGGCATTTTaGACGGATCGGCCAGACCTG +
Preference number: 4 (lower is better)
Translates to: GWQLNDGERVKKVRDPHHPLLAF*TDRPDL
Trigger: CAGGTCTGGCCGATCCGTTCAAAATGCCAGTAATGG...ATGGTGGGGGTCTCTCACCTTCTTGACCCTCTCTCCATCATTCAGCTGCCAGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000478943.5
ENST00000581396.5
CDS-3UTR TCA 90 bp AGACACGGTGGCATTTCCATGGAAACACAGGTGTGCAGGCCGTGTGGAGCTGGGATTACATTGCTGGAGTaGACTGAGGGTGCCACTGAC +
Preference number: 4 (lower is better)
Translates to: RHGGISMETQVCRPCGAGITLLE*TEGATD
Trigger: GTCAGTGGCACCCTCAGTTCACTCCAGCAATGTAAT...CCCAGCTCCACACGGCCTGCACACCTGTGTTTCCATGGAAATGCCACCGTGTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000535933.5
ENST00000540946.5
ENST00000581396.5
CDS-3UTR TCA 90 bp AGAGTCTCTGGCTGCAGTTGTCCCACCACTCAGAGAAAAGAAGTGGCTGAAGCTGAAGAGGGCATCCTCTaGCCGCTCTGGCTTCTTCCG +
Preference number: 4 (lower is better)
Translates to: RVSGCSCPTTQRKEVAEAEEGIL*PLWLLP
Trigger: CGGAAGAAGCCAGAGCGGTCAGAGGATGCCCTCTTC...AGCTTCAGCCACTTCTTTTCTCTGAGTGGTGGGACAACTGCAGCCAGAGACTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000581396.5
CDS-3UTR TCA 90 bp AGGCCTGGGAGCAGACACGGTGGCATTTCCATGGAAACACAGGTGTGCAGGCCGCCAAATGTCACAAGGTaGCAAGTCCAAGGAGTGAGA +
Preference number: 4 (lower is better)
Translates to: RPGSRHGGISMETQVCRPPNVTR*QVQGVR
Trigger: TCTCACTCCTTGGACTTGTCACCTTGTGACATTTGG...CGGCCTGCACACCTGTGTTTCCATGGAAATGCCACCGTGTCTGCTCCCAGGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000478943.5
ENST00000581396.5
CDS-3UTR TCA 90 bp GGAGGGGAGAGAGTCTCTGGCTGCAGTTGTCCCACCACTCAGAGAAAAGAAGTGGGGCTGGCAGCTGAATaGTGGAGAGAGGGTCAAGAA +
Preference number: 4 (lower is better)
Translates to: GGERVSGCSCPTTQRKEVGLAAE*WREGQE
Trigger: TTCTTGACCCTCTCTCCATCATTCAGCTGCCAGCCC...CACTTCTTTTCTCTGAGTGGTGGGACAACTGCAGCCAGAGACTCTCTCCCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000478943.5
ENST00000581396.5
CDS-3UTR TCA 90 bp GAGCCTGCAGTGTGTGCGTGGCAGTTTGGTTTATTGGTAGTGTCGTCTCAGCAGAGCATGACCCCCAGCTaGAGTCGCCATCCTGAATGC +
Preference number: 4 (lower is better)
Translates to: EPAVCAWQFGLLVVSSQQSMTPS*SRHPEC
Trigger: GCATTCAGGATGGCGACTTCAGCTGGGGGTCATGCT...CTGCTGAGACGACACTACCAATAAACCAAACTGCCACGCACACACTGCAGGCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR TCA 90 bp TGGCAGTTTGGTTTATTGGTAGTGTCGTCTCAGCAGCGTGCCACATGGCCACCACCTGAGCAACTGGAGTaGGACATCCCAGCTAGTCCC +
Preference number: 4 (lower is better)
Translates to: WQFGLLVVSSQQRATWPPPEQLE*DIPASP
Trigger: GGGACTAGCTGGGATGTCTCACTCCAGTTGCTCAGG...TGGTGGCCATGTGGCACGCTGCTGAGACGACACTACCAATAAACCAAACTGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR TCA 90 bp AGCCTGGGCTGGCAGCTGAATGATGGAGAGAGGGTCAAGAAGGTGAGAGACCCCGTCTTTGAGAAACATTaGGGAGGCAGGGGCTCATCA +
Preference number: 4 (lower is better)
Translates to: SLGWQLNDGERVKKVRDPVFEKH*GGRGSS
Trigger: TGATGAGCCCCTGCCTCCTCAATGTTTCTCAAAGAC...GGGGTCTCTCACCTTCTTGACCCTCTCTCCATCATTCAGCTGCCAGCCCAGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR TCA 90 bp GTGCAGGCCGTGTGGAGCTGGGGATGTAGGAGTGGCCAGTGCCCGGTGTCCACGTATATACTGTATCTGTaGTTTCTAACACTCACGGAG +
Preference number: 4 (lower is better)
Translates to: VQAVWSWGCRSGQCPVSTYILYL*FLTLTE
Trigger: CTCCGTGAGTGTTAGAAATCACAGATACAGTATATA...CGTGGACACCGGGCACTGGCCACTCCTACATCCCCAGCTCCACACGGCCTGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR TCA 90 bp CTCCCTGAATTCCAGATGGCTCATCCTAGCCAGAGCTGCTATCAGAGGAGCCTCTTCTGCTTACCCTACTaGGCCCCAAGCAGGACTCAG +
Preference number: 4 (lower is better)
Translates to: LPEFQMAHPSQSCYQRSLFCLPY*APSRTQ
Trigger: CTGAGTCCTGCTTGGGGCTCAGTAGGGTAAGCAGAA...GAGGCTCCTCTGATAGCAGCTCTGGCTAGGATGAGCCATCTGGAATTCAGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468944.1
CDS-3UTR GCA 90 bp AGACACGGTGGCATTTCCATGGAAACACAGGTGTGCAGGCCGTGTGGAGCTGGGGTCCTGTTGAGCTCCTaGAGCAACTCCAGATCAGAT +
Preference number: 4 (lower is better)
Translates to: RHGGISMETQVCRPCGAGVLLSS*SNSRSD
Trigger: ATCTGATCTGGAGTTGCTGCAGGAGCTCAACAGGAC...CCCAGCTCCACACGGCCTGCACACCTGTGTTTCCATGGAAATGCCACCGTGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000535933.5
ENST00000540946.5
ENST00000581396.5
CDS-3UTR GCA 90 bp TGGCAGGGCCTCAGAGACAACCCAAGTCACAACCCAAAGGCAGCCAAAGGGCTGGTCCTGTTGAGCTCCTaGAGCAACTCCAGATCAGAT +
Preference number: 4 (lower is better)
Translates to: WQGLRDNPSHNPKAAKGLVLLSS*SNSRSD
Trigger: ATCTGATCTGGAGTTGCTGCAGGAGCTCAACAGGAC...CAGCCCTTTGGCTGCCTTTGGGTTGTGACTTGGGTTGTCTCTGAGGCCCTGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR GCA 90 bp GGCATTTCCATGGAAACACAGGTGTGCAGGCCGTGTGGAGCTGGGGATGTAGGAGTTACCGTCTTGCGCTaGTCAGCCAAGGAGTTTCCT +
Preference number: 4 (lower is better)
Translates to: GISMETQVCRPCGAGDVGVTVLR*SAKEFP
Trigger: AGGAAACTCCTTGGCTGAGCAGCGCAAGACGGTAAC...TCCTACATCCCCAGCTCCACACGGCCTGCACACCTGTGTTTCCATGGAAATGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000535933.5
ENST00000540946.5
ENST00000581396.5
CDS-3UTR GCA 90 bp CTAGTGGGAGGCCTGGGAGCAGACACGGTGGCATTTCCATGGAAACACAGGTGTGTTACCGTCTTGCGCTaGTCAGCCAAGGAGTTTCCT +
Preference number: 4 (lower is better)
Translates to: LVGGLGADTVAFPWKHRCVTVLR*SAKEFP
Trigger: AGGAAACTCCTTGGCTGAGCAGCGCAAGACGGTAAC...ACACCTGTGTTTCCATGGAAATGCCACCGTGTCTGCTCCCAGGCCTCCCACTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000535933.5
ENST00000540946.5
ENST00000581396.5
CDS-3UTR GCA 90 bp AGCAGACACGGTGGCATTTCCATGGAAACACAGGTGTGCAGGCCGTGTGGAGCTCATAGGTTACCGTCTTaGGCTGCTCAGCCAAGGAGT +
Preference number: 4 (lower is better)
Translates to: SRHGGISMETQVCRPCGAHRLPS*AAQPRS
Trigger: ACTCCTTGGCTGAGCAGCGCAAGACGGTAACCTATG...AGCTCCACACGGCCTGCACACCTGTGTTTCCATGGAAATGCCACCGTGTCTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000535933.5
ENST00000540946.5
ENST00000581396.5
CDS-3UTR GCA 90 bp AGGGGAGAGAGTCTCTGGCTGCAGTTGTCCCACCACTCAGAGAAAAGAAGTGGCTCCATGACAGATGGCTaGGCAACGGGGATCCCTTCT +
Preference number: 4 (lower is better)
Translates to: RGESLWLQLSHHSEKRSGSMTDG*ATGIPS
Trigger: AGAAGGGATCCCCGTTGCGCAGCCATCTGTCATGGA...GCCACTTCTTTTCTCTGAGTGGTGGGACAACTGCAGCCAGAGACTCTCTCCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000581396.5
CDS-3UTR GCA 90 bp AGGGGAGAGAGTCTCTGGCTGCAGTTGTCCCACCACTCAGAGAAAAGAAGTGGCGAGAGAGTCTCTGGCTaGAGTTGTCCCACCACTCAG +
Preference number: 4 (lower is better)
Translates to: RGESLWLQLSHHSEKRSGERVSG*SCPTTQ
Trigger: CTGAGTGGTGGGACAACTGCAGCCAGAGACTCTCTC...GCCACTTCTTTTCTCTGAGTGGTGGGACAACTGCAGCCAGAGACTCTCTCCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000581396.5
CDS-3UTR GCA 90 bp TGTCACAAGGTGACAAGTCCAAGGAGTGAGACCAGGCCCATGAGTGCAGCACACCTGCTCTTCCAGAGATaGCACAAAGCCCCTTCAGGG +
Preference number: 4 (lower is better)
Translates to: CHKVTSPRSETRPMSAAHLLFQR*HKAPSG
Trigger: CCCTGAAGGGGCTTTGTGGCATCTCTGGAAGAGCAG...GTGTGCTGCACTCATGGGCCTGGTCTCACTCCTTGGACTTGTCACCTTGTGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000478943.5
ENST00000581396.5
CDS-3UTR GCA 90 bp AGAGTCTCTGGCTGCAGTTGTCCCACCACTCAGAGAAAAGAAGTGGCTGAAGCTCATCTGCGGGCTGCCTaGTGCCCTCCCAATTGTCCT +
Preference number: 4 (lower is better)
Translates to: RVSGCSCPTTQRKEVAEAHLRAA*CPPNCP
Trigger: AGGACAATTGGGAGGGCAGCAGGCAGCCCGCAGATG...AGCTTCAGCCACTTCTTTTCTCTGAGTGGTGGGACAACTGCAGCCAGAGACTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000478943.5
ENST00000581396.5
CDS-3UTR GCA 90 bp AGAGTCTCTGGCTGCAGTTGTCCCACCACTCAGAGAAAAGAAGTGGCTGAAGCTGTCGTCTCAGCAGCGTaGCACATGGCCACCATCTGC +
Preference number: 4 (lower is better)
Translates to: RVSGCSCPTTQRKEVAEAVVSAA*HMATIC
Trigger: GCAGATGGTGGCCATGTGGCACGCTGCTGAGACGAC...AGCTTCAGCCACTTCTTTTCTCTGAGTGGTGGGACAACTGCAGCCAGAGACTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000478943.5
ENST00000581396.5
CDS-3UTR GCA 90 bp CAGAGCAATACCTCCAGTGCAAGTCCCTCCACAAGCCAGGACCAGGTGTGCGGGAGCTCCTCATATATGTaGACAACGCCGGTGAGATCA +
Preference number: 4 (lower is better)
Translates to: QSNTSSASPSTSQDQVCGSSSYM*TTPVRS
Trigger: TGATCTCACCGGCGTTGTGCACATATATGAGGAGCT...CCCGCACACCTGGTCCTGGCTTGTGGAGGGACTTGCACTGGAGGTATTGCTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR GCA 90 bp GGCCTGGGAGCAGACACGGTGGCATTTCCATGGAAACACAGGTGTGCAGGCCGTAGCTCCTCATATATGTaGACAACGCCGGTGAGATCA +
Preference number: 4 (lower is better)
Translates to: GLGADTVAFPWKHRCAGRSSSYM*TTPVRS
Trigger: TGATCTCACCGGCGTTGTGCACATATATGAGGAGCT...ACGGCCTGCACACCTGTGTTTCCATGGAAATGCCACCGTGTCTGCTCCCAGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379504.8
ENST00000535933.5
ENST00000581396.5
CDS-3UTR GCA 90 bp ACAAGTCCAAGGAGTGAGACCAGGCCCATGAGTGCAGCACACCCTGCTCTTCCAGAGCAATACCTCCAGTaGAAGTCCCTCCACAAGCCA +
Preference number: 4 (lower is better)
Translates to: TSPRSETRPMSAAHPALPEQYLQ*KSLHKP
Trigger: TGGCTTGTGGAGGGACTTGCACTGGAGGTATTGCTC...TGGAAGAGCAGGGTGTGCTGCACTCATGGGCCTGGTCTCACTCCTTGGACTTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR GCA 90 bp AGCAGACACGGTGGCATTTCCATGGAAACACAGGTGTGCAGGCCGTGTGGAGCTGGGAACCTCCAAGGATaGCACAAAGCTGTTTGCTGC +
Preference number: 4 (lower is better)
Translates to: SRHGGISMETQVCRPCGAGNLQG*HKAVCC
Trigger: GCAGCAAACAGCTTTGTGGCATCCTTGGAGGTTCCC...AGCTCCACACGGCCTGCACACCTGTGTTTCCATGGAAATGCCACCGTGTCTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR GCA 90 bp GGCATTTCCATGGAAACACAGGTGTGCAGGCCGTGTGGAGCTGGGGATGTAGGATGTCAGGAGAGTCTGTaGAAGGAGGCCAAGGCCTAT +
Preference number: 4 (lower is better)
Translates to: GISMETQVCRPCGAGDVGCQESL*KEAKAY
Trigger: ATAGGCCTTGGCCTCCTTGCACAGACTCTCCTGACA...TCCTACATCCCCAGCTCCACACGGCCTGCACACCTGTGTTTCCATGGAAATGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR GCA 90 bp CAGTTTGGTTTATTGGTAGTGTCGTCTCAGCAGCGTGCCACATGGCCACCATCTAGATGGCCTGCTCAGTaGCTGGAGACTGCCCAGGCA +
Preference number: 4 (lower is better)
Translates to: QFGLLVVSSQQRATWPPSRWPAQ*LETAQA
Trigger: TGCCTGGGCAGTCTCCAGGCACTGAGCAGGCCATCT...AGATGGTGGCCATGTGGCACGCTGCTGAGACGACACTACCAATAAACCAAACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR GCA 90 bp CATGGATCAGGAACCTGTGCTGACCTAGGCAGTGCATGCTGGAGGGGACAGGAGCTCCAGAACCAGCTCTaGCCACAGAAACACATGACA +
Preference number: 4 (lower is better)
Translates to: HGSGTCADLGSACWRGQELQNQL*PQKHMT
Trigger: TGTCATGTGTTTCTGTGGGCAGAGCTGGTTCTGGAG...CTCCTGTCCCCTCCAGCATGCACTGCCTAGGTCAGCACAGGTTCCTGATCCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR GCA 90 bp AGAGTCTCTGGCTGCAGTTGTCCCACCACTCAGAGAAAAGAAGTGGCTGAAGCTAGTGGGGTGGATGGATaGTCTGAGCCTCGGGTGCAC +
Preference number: 4 (lower is better)
Translates to: RVSGCSCPTTQRKEVAEASGVDG*SEPRVH
Trigger: GTGCACCCGAGGCTCAGAGCATCCATCCACCCCACT...AGCTTCAGCCACTTCTTTTCTCTGAGTGGTGGGACAACTGCAGCCAGAGACTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR CCA 90 bp CCTGGCACAGGGTCCTGGGTCGGGCAGCACTTGCTCTTCACTGGAATAGTTCCTTCGAATGGCATCCTTTaGCCCTTCCTCCGTCTCATT +
Preference number: 4 (lower is better)
Translates to: PGTGSWVGQHLLFTGIVPSNGIL*PFLRLI
Trigger: AATGAGACGGAGGAAGGGCCAAAGGATGCCATTCGA...AGGAACTATTCCAGTGAAGAGCAAGTGCTGCCCGACCCAGGACCCTGTGCCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR CCA 90 bp TGGGAGCAGACACGGTGGCATTTCCATGGAAACACAGGTGTGCAGGCCGTGTGGTCGAATGGCATCCTTTaGCCCTTCCTCCGTCTCATT +
Preference number: 4 (lower is better)
Translates to: WEQTRWHFHGNTGVQAVWSNGIL*PFLRLI
Trigger: AATGAGACGGAGGAAGGGCCAAAGGATGCCATTCGA...CCACACGGCCTGCACACCTGTGTTTCCATGGAAATGCCACCGTGTCTGCTCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000535933.5
ENST00000540946.5
ENST00000581396.5
CDS-3UTR CCA 90 bp AGAGAAAAGAAGTGGCTGAAGCTGGTCCTGACTAGTGGGAGGCCTGGGAGCAGAATTGGGACCTGGGCATaGTCGCAGCTGGATCCACTT +
Preference number: 4 (lower is better)
Translates to: REKKWLKLVLTSGRPGSRIGTWA*SQLDPL
Trigger: AAGTGGATCCAGCTGCGACCATGCCCAGGTCCCAAT...TCTGCTCCCAGGCCTCCCACTAGTCAGGACCAGCTTCAGCCACTTCTTTTCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000581396.5
CDS-3UTR CCA 90 bp AGTGGGAGGCCTGGGAGCAGACACGGTGGCATTTCCATGGAAACACAGGTGTGCGTTCACTCCGCAGCCTaGCAATCTGTTCTGAATTGG +
Preference number: 4 (lower is better)
Translates to: SGRPGSRHGGISMETQVCVHSAA*QSVLNW
Trigger: CCAATTCAGAACAGATTGCCAGGCTGCGGAGTGAAC...GCACACCTGTGTTTCCATGGAAATGCCACCGTGTCTGCTCCCAGGCCTCCCACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000581396.5
CDS-3UTR CCA 90 bp CTCAGAGAAAAGAAGTGGCTGAAGCTGGTCCTGACTAGTGGGAGGCCTGGGAGCCGGGGATTACATTGCTaGAGTGAACTGAGGGTGCCA +
Preference number: 4 (lower is better)
Translates to: LREKKWLKLVLTSGRPGSRGLHC*SELRVP
Trigger: TGGCACCCTCAGTTCACTCCAGCAATGTAATCCCCG...GCTCCCAGGCCTCCCACTAGTCAGGACCAGCTTCAGCCACTTCTTTTCTCTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000535933.5
ENST00000581396.5
CDS-3UTR CCA 90 bp GGAGGGGAGAGAGTCTCTGGCTGCAGTTGTCCCACCACTCAGAGAAAAGAAGTGGAAAGACAGTCCGGGTaGTCTGCTCAGGAAGCACTG +
Preference number: 4 (lower is better)
Translates to: GGERVSGCSCPTTQRKEVERQSG*SAQEAL
Trigger: CAGTGCTTCCTGAGCAGACCACCCGGACTGTCTTTC...CACTTCTTTTCTCTGAGTGGTGGGACAACTGCAGCCAGAGACTCTCTCCCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000478943.5
ENST00000581396.5
CDS-3UTR CCA 90 bp GAAAAGAAGTGGCTGAAGCTGGTCCTGACTAGTGGGAGGCCTGGGAGCAGACACGCATCAGCCCATGCCTaGATCAGAGCAAGCACTTTG +
Preference number: 4 (lower is better)
Translates to: EKKWLKLVLTSGRPGSRHASAHA*IRASTL
Trigger: CAAAGTGCTTGCTCTGATCCAGGCATGGGCTGATGC...GTGTCTGCTCCCAGGCCTCCCACTAGTCAGGACCAGCTTCAGCCACTTCTTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000535933.5
CDS-3UTR CCA 90 bp ATGGAAACACAGGTGTGCAGGCCGTGTGGAGCTGGGGATGTAGGAGTGGCCAGTCGTCCAAGTCTGCCATaGGAAATTCAACCCCTTTCC +
Preference number: 4 (lower is better)
Translates to: METQVCRPCGAGDVGVASRPSLP*EIQPLS
Trigger: GGAAAGGGGTTGAATTTCCCATGGCAGACTTGGACG...ACTGGCCACTCCTACATCCCCAGCTCCACACGGCCTGCACACCTGTGTTTCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379504.8
ENST00000535933.5
ENST00000581396.5
CDS-3UTR CCA 90 bp AGTGGGAGGCCTGGGAGCAGACACGGTGGCATTTCCATGGAAACACAGGTGTGCCGTCCAAGTCTGCCATaGGAAATTCAACCCCTTTCC +
Preference number: 4 (lower is better)
Translates to: SGRPGSRHGGISMETQVCRPSLP*EIQPLS
Trigger: GGAAAGGGGTTGAATTTCCCATGGCAGACTTGGACG...GCACACCTGTGTTTCCATGGAAATGCCACCGTGTCTGCTCCCAGGCCTCCCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379504.8
ENST00000535933.5
ENST00000581396.5
CDS-3UTR CCA 90 bp AGGCCTGGGAGCAGACACGGTGGCATTTCCATGGAAACACAGGTGTGCAGGCCGGTGTGCGTGGCAGTTTaGTTTATTGGTAGTGTCGTC +
Preference number: 4 (lower is better)
Translates to: RPGSRHGGISMETQVCRPVCVAV*FIGSVV
Trigger: GACGACACTACCAATAAACCAAACTGCCACGCACAC...CGGCCTGCACACCTGTGTTTCCATGGAAATGCCACCGTGTCTGCTCCCAGGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379504.8
ENST00000478943.5
ENST00000581396.5
CDS-3UTR CCA 90 bp GGAGGCCTGGGAGCAGACACGGTGGCATTTCCATGGAAACACAGGTGTGCAGGCCCTGCAGTGTGTGCGTaGCAGTTTGGTTTATTGGTA +
Preference number: 4 (lower is better)
Translates to: GGLGADTVAFPWKHRCAGPAVCA*QFGLLV
Trigger: TACCAATAAACCAAACTGCCACGCACACACTGCAGG...GCCTGCACACCTGTGTTTCCATGGAAATGCCACCGTGTCTGCTCCCAGGCCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379504.8
ENST00000478943.5
ENST00000581396.5
CDS-3UTR CCA 90 bp TGGCAGGGCCTCAGAGACAACCCAAGTCACAACCCAAAGGCAGCCAAAGGGCTGAGTGAGGACACGGGATaGGAATACATGTTACCAGCC +
Preference number: 4 (lower is better)
Translates to: WQGLRDNPSHNPKAAKGLSEDTG*EYMLPA
Trigger: GGCTGGTAACATGTATTCCCATCCCGTGTCCTCACT...CAGCCCTTTGGCTGCCTTTGGGTTGTGACTTGGGTTGTCTCTGAGGCCCTGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR CCA 90 bp GAGCCTGCAGTGTGTGCGTGGCAGTTTGGTTTATTGGTAGTGTCGTCTCAGCAGCACGGAGGAGCTTCCTaGGTGAACCTGAGCAACTGG +
Preference number: 4 (lower is better)
Translates to: EPAVCAWQFGLLVVSSQQHGGAS*VNLSNW
Trigger: CCAGTTGCTCAGGTTCACCCAGGAAGCTCCTCCGTG...CTGCTGAGACGACACTACCAATAAACCAAACTGCCACGCACACACTGCAGGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR CCA 90 bp CGAGTGGACAGCAAACGCGACATTCAACACATTCCTCTTTTCAGTAGCCCCCAAGCCTCTGGGTGCACCTaGGCCATCCCAGCCACCTTT +
Preference number: 4 (lower is better)
Translates to: RVDSKRDIQHIPLFSSPQASGCT*AIPATF
Trigger: AAAGGTGGCTGGGATGGCCCAGGTGCACCCAGAGGC...TTGGGGGCTACTGAAAAGAGGAATGTGTTGAATGTCGCGTTTGCTGTCCACTCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR CCA 90 bp TGGCAGTTTGGTTTATTGGTAGTGTCGTCTCAGCAGCGTGCCACATGGCCACCAATGAGGCAGGGAGGCTaGCTCTTCCCTCTGAGGACA +
Preference number: 4 (lower is better)
Translates to: WQFGLLVVSSQQRATWPPMRQGG*LFPLRT
Trigger: TGTCCTCAGAGGGAAGAGCCAGCCTCCCTGCCTCAT...TGGTGGCCATGTGGCACGCTGCTGAGACGACACTACCAATAAACCAAACTGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR CCA 90 bp CTGGGCTGGCAGCTGAATGATGGAGAGAGGGTCAAGAAGGTGAGAGACCCCCACAGGCTCCTGACTTTTTaGGACTCCTGGTTCCATGAG +
Preference number: 4 (lower is better)
Translates to: LGWQLNDGERVKKVRDPHRLLTF*DSWFHE
Trigger: CTCATGGAACCAGGAGTCCCAAAAAGTCAGGAGCCT...GTGGGGGTCTCTCACCTTCTTGACCCTCTCTCCATCATTCAGCTGCCAGCCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR CCA 90 bp TGTCACAAGGTGACAAGTCCAAGGAGTGAGACCAGGCCCATGAGTGCAGCACACCTCTCCGGGAGAGCCTaGAGGTATGGACAGACAGAA +
Preference number: 4 (lower is better)
Translates to: CHKVTSPRSETRPMSAAHLSGRA*RYGQTE
Trigger: TTCTGTCTGTCCATACCTCCAGGCTCTCCCGGAGAG...GTGTGCTGCACTCATGGGCCTGGTCTCACTCCTTGGACTTGTCACCTTGTGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
3UTR CAA 72 bp TGTGAGCCTGCAGTGTGTGCGTGGCAGTTTGGTTTATaGGTAGTGTCGTCTCAGCAGCGTGCCACATGGCCA +
Preference number: 4 (lower is better)
Translates to: CEPAVCAWQFGL*VVSSQQRATWP
Trigger: TGGCCATGTGGCACGCTGCTGAGACGACACTACCAATAAACCAAACTGCCACGCACACACTGCAGGCTCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379504.8
ENST00000478943.5
ENST00000581396.5
CDS-3UTR TCA 90 bp GGCTGGCAGCTGAATGATGGAGAGAGGGTCAAGAAGGTGAGAGACCCCCACCATCCAGAACACTGTCGATaGAATCTCGGTTGGCCACAA +
Preference number: 4 (lower is better)
Translates to: GWQLNDGERVKKVRDPHHPEHCR*NLGWPQ
Trigger: TTGTGGCCAACCGAGATTTCATCGACAGTGTTCTGG...ATGGTGGGGGTCTCTCACCTTCTTGACCCTCTCTCCATCATTCAGCTGCCAGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000318094.14
ENST00000379504.8
CDS-3UTR TCA 90 bp GGCATTTCCATGGAAACACAGGTGTGCAGGCCGTGTGGAGCTGGGGATGTAGGACCAGAACACTGTCGATaGAATCTCGGTTGGCCACAA +
Preference number: 4 (lower is better)
Translates to: GISMETQVCRPCGAGDVGPEHCR*NLGWPQ
Trigger: TTGTGGCCAACCGAGATTTCATCGACAGTGTTCTGG...TCCTACATCCCCAGCTCCACACGGCCTGCACACCTGTGTTTCCATGGAAATGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000535933.5
ENST00000540946.5
CDS-3UTR TCA 90 bp CCTGGGAGCAGACACGGTGGCATTTCCATGGAAACACAGGTGTGCAGGCCGTGTGAAGGAAGACGTTGTTaGGGTCATCGTTCACATGCA +
Preference number: 4 (lower is better)
Translates to: PGSRHGGISMETQVCRPCEGRRC*GHRSHA
Trigger: TGCATGTGAACGATGACCTCAACAACGTCTTCCTTC...ACACGGCCTGCACACCTGTGTTTCCATGGAAATGCCACCGTGTCTGCTCCCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000535933.5
ENST00000540946.5
ENST00000581396.5
CDS-3UTR TCA 90 bp ACAAGTCCAAGGAGTGAGACCAGGCCCATGAGTGCAGCACACCCTGCTCTTCCAATTACATTGCTGGAGTaGACTGAGGGTGCCACTGAC +
Preference number: 4 (lower is better)
Translates to: TSPRSETRPMSAAHPALPITLLE*TEGATD
Trigger: GTCAGTGGCACCCTCAGTTCACTCCAGCAATGTAAT...TGGAAGAGCAGGGTGTGCTGCACTCATGGGCCTGGTCTCACTCCTTGGACTTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000478943.5
ENST00000581396.5
CDS-3UTR TCA 90 bp AGTGGGAGGCCTGGGAGCAGACACGGTGGCATTTCCATGGAAACACAGGTGTGCCAAACTCTTCACTTGTaGCACCCTCCTCCAGATCAT +
Preference number: 4 (lower is better)
Translates to: SGRPGSRHGGISMETQVCQTLHL*HPPPDH
Trigger: ATGATCTGGAGGAGGGTGTCACAAGTGAAGAGTTTG...GCACACCTGTGTTTCCATGGAAATGCCACCGTGTCTGCTCCCAGGCCTCCCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000535933.5
ENST00000540946.5
ENST00000581396.5
CDS-3UTR TCA 90 bp CTGGGAGCAGACACGGTGGCATTTCCATGGAAACACAGGTGTGCAGGCCGTGTGCAAACTCTTCACTTGTaGCACCCTCCTCCAGATCAT +
Preference number: 4 (lower is better)
Translates to: LGADTVAFPWKHRCAGRVQTLHL*HPPPDH
Trigger: ATGATCTGGAGGAGGGTGTCACAAGTGAAGAGTTTG...CACACGGCCTGCACACCTGTGTTTCCATGGAAATGCCACCGTGTCTGCTCCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000535933.5
ENST00000540946.5
ENST00000581396.5
CDS-3UTR TCA 90 bp AGAGTCTCTGGCTGCAGTTGTCCCACCACTCAGAGAAAAGAAGTGGCTGAAGCTGACAAGTCCAAGGAGTaGGACCAGGCCCATGAGTGC +
Preference number: 4 (lower is better)
Translates to: RVSGCSCPTTQRKEVAEADKSKE*DQAHEC
Trigger: GCACTCATGGGCCTGGTCTCACTCCTTGGACTTGTC...AGCTTCAGCCACTTCTTTTCTCTGAGTGGTGGGACAACTGCAGCCAGAGACTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000478943.5
ENST00000581396.5
CDS-3UTR TCA 90 bp CTGGGAGCAGACACGGTGGCATTTCCATGGAAACACAGGTGTGCAGGCCGTGTGCCAAATGTCACAAGGTaGCAAGTCCAAGGAGTGAGA +
Preference number: 4 (lower is better)
Translates to: LGADTVAFPWKHRCAGRVPNVTR*QVQGVR
Trigger: TCTCACTCCTTGGACTTGTCACCTTGTGACATTTGG...CACACGGCCTGCACACCTGTGTTTCCATGGAAATGCCACCGTGTCTGCTCCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000478943.5
ENST00000581396.5
CDS-3UTR TCA 90 bp GTTTGGTTTATTGGTAGTGTCGTCTCAGCAGCGTGCCACATGGCCACCATCTGCCAGGAGACACACCAGTaGGGACACGGGATGGGAATA +
Preference number: 4 (lower is better)
Translates to: VWFIGSVVSAACHMATICQETHQ*GHGMGI
Trigger: TATTCCCATCCCGTGTCCTCACTGGTGTGTCTCCTG...GCAGATGGTGGCCATGTGGCACGCTGCTGAGACGACACTACCAATAAACCAAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR TCA 90 bp GTGTGCAGGCCGTGTGGAGCTGGGGATGTAGGAGTGGCCAGTGCCCGGTGTCCATATATACTGTATCTGTaGTTTCTAACACTCACGGAG +
Preference number: 4 (lower is better)
Translates to: VCRPCGAGDVGVASARCPYILYL*FLTLTE
Trigger: CTCCGTGAGTGTTAGAAATCACAGATACAGTATATA...TGGACACCGGGCACTGGCCACTCCTACATCCCCAGCTCCACACGGCCTGCACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR TCA 90 bp CATGGAAACACAGGTGTGCAGGCCGTGTGGAGCTGGGGATGTAGGAGTGGCCAGAGCCCCCAACAATCCTaGGAATCCTCACAATTAAGT +
Preference number: 4 (lower is better)
Translates to: HGNTGVQAVWSWGCRSGQSPQQS*ESSQLS
Trigger: ACTTAATTGTGAGGATTCTCAGGATTGTTGGGGGCT...CTGGCCACTCCTACATCCCCAGCTCCACACGGCCTGCACACCTGTGTTTCCATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR TCA 90 bp AGGCCTGGGAGCAGACACGGTGGCATTTCCATGGAAACACAGGTGTGCAGGCCGATCACCCTTCCCTTCTaGACTCTGTTTTCGATTGTC +
Preference number: 4 (lower is better)
Translates to: RPGSRHGGISMETQVCRPITLPF*TLFSIV
Trigger: GACAATCGAAAACAGAGTTCAGAAGGGAAGGGTGAT...CGGCCTGCACACCTGTGTTTCCATGGAAATGCCACCGTGTCTGCTCCCAGGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540946.5
CDS-3UTR GCA 90 bp CTAGTGGGAGGCCTGGGAGCAGACACGGTGGCATTTCCATGGAAACACAGGTGTTCACGGGGATTACATTaGTGGAGTGAACTGAGGGTG +
Preference number: 4 (lower is better)
Translates to: LVGGLGADTVAFPWKHRCSRGLH*WSELRV
Trigger: CACCCTCAGTTCACTCCAGCAATGTAATCCCCGTGA...ACACCTGTGTTTCCATGGAAATGCCACCGTGTCTGCTCCCAGGCCTCCCACTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000535933.5
ENST00000540946.5
ENST00000581396.5
CDS-3UTR GCA 90 bp GGCATTTCCATGGAAACACAGGTGTGCAGGCCGTGTGGAGCTGGGGATGTAGGATCACGGGGATTACATTaGTGGAGTGAACTGAGGGTG +
Preference number: 4 (lower is better)
Translates to: GISMETQVCRPCGAGDVGSRGLH*WSELRV
Trigger: CACCCTCAGTTCACTCCAGCAATGTAATCCCCGTGA...TCCTACATCCCCAGCTCCACACGGCCTGCACACCTGTGTTTCCATGGAAATGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000535933.5
ENST00000540946.5
ENST00000581396.5
CDS-3UTR GCA 90 bp TGGCATTTCCATGGAAACACAGGTGTGCAGGCCGTGTGGAGCTGGGGATGTAGGTCACGGGGATTACATTaGTGGAGTGAACTGAGGGTG +
Preference number: 4 (lower is better)
Translates to: WHFHGNTGVQAVWSWGCRSRGLH*WSELRV
Trigger: CACCCTCAGTTCACTCCAGCAATGTAATCCCCGTGA...CCTACATCCCCAGCTCCACACGGCCTGCACACCTGTGTTTCCATGGAAATGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000535933.5
ENST00000540946.5
ENST00000581396.5
CDS-3UTR GCA 90 bp GGAGGGGAGAGAGTCTCTGGCTGCAGTTGTCCCACCACTCAGAGAAAAGAAGTGCATAGGTTACCGTCTTaGGCTGCTCAGCCAAGGAGT +
Preference number: 4 (lower is better)
Translates to: GGERVSGCSCPTTQRKEVHRLPS*AAQPRS
Trigger: ACTCCTTGGCTGAGCAGCGCAAGACGGTAACCTATG...CACTTCTTTTCTCTGAGTGGTGGGACAACTGCAGCCAGAGACTCTCTCCCCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000581396.5
CDS-3UTR GCA 90 bp GTTTGGTTTATTGGTAGTGTCGTCTCAGCAGCGTGCCACATGGCCACCATCTGCTCCATGACAGATGGCTaGGCAACGGGGATCCCTTCT +
Preference number: 4 (lower is better)
Translates to: VWFIGSVVSAACHMATICSMTDG*ATGIPS
Trigger: AGAAGGGATCCCCGTTGCGCAGCCATCTGTCATGGA...GCAGATGGTGGCCATGTGGCACGCTGCTGAGACGACACTACCAATAAACCAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000478943.5
ENST00000581396.5
CDS-3UTR GCA 90 bp TGGCAGTTTGGTTTATTGGTAGTGTCGTCTCAGCAGCGTGCCACATGGCCACCAGAGAGAGTCTCTGGCTaGAGTTGTCCCACCACTCAG +
Preference number: 4 (lower is better)
Translates to: WQFGLLVVSSQQRATWPPERVSG*SCPTTQ
Trigger: CTGAGTGGTGGGACAACTGCAGCCAGAGACTCTCTC...TGGTGGCCATGTGGCACGCTGCTGAGACGACACTACCAATAAACCAAACTGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000478943.5
ENST00000581396.5
CDS-3UTR GCA 90 bp GTGGGAGGGGAGAGAGTCTCTGGCTGCAGTTGTCCCACCACTCAGAGAAAAGAAAAAGGCATCAGCCCATaGCTGGATCAGAGCAAGCAC +
Preference number: 4 (lower is better)
Translates to: VGGERVSGCSCPTTQRKEKGISP*LDQSKH
Trigger: GTGCTTGCTCTGATCCAGGCATGGGCTGATGCCTTT...TTCTTTTCTCTGAGTGGTGGGACAACTGCAGCCAGAGACTCTCTCCCCTCCCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000379504.8
CDS-3UTR GCA 90 bp CAGACACGGTGGCATTTCCATGGAAACACAGGTGTGCAGGCCGTGTGGAGCTGGAGCTCCTCATATATGTaGACAACGCCGGTGAGATCA +
Preference number: 4 (lower is better)
Translates to: QTRWHFHGNTGVQAVWSWSSSYM*TTPVRS
Trigger: TGATCTCACCGGCGTTGTGCACATATATGAGGAGCT...CCAGCTCCACACGGCCTGCACACCTGTGTTTCCATGGAAATGCCACCGTGTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379504.8
ENST00000535933.5
ENST00000581396.5
CDS-3UTR GCA 90 bp GGCATTTCCATGGAAACACAGGTGTGCAGGCCGTGTGGAGCTGGGGATGTAGGAGGGGATGCATACAGCTaGAGTATTCTCCTTCTGAGC +
Preference number: 4 (lower is better)
Translates to: GISMETQVCRPCGAGDVGGDAYS*SILLLS
Trigger: GCTCAGAAGGAGAATACTGCAGCTGTATGCATCCCC...TCCTACATCCCCAGCTCCACACGGCCTGCACACCTGTGTTTCCATGGAAATGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR GCA 90 bp GGCTGGCAGCTGAATGATGGAGAGAGGGTCAAGAAGGTGAGAGACCCCCACCATTATACTTGCTTCCTGTaGAGGCCTCAAGCAAGAGCC +
Preference number: 4 (lower is better)
Translates to: GWQLNDGERVKKVRDPHHYTCFL*RPQARA
Trigger: GGCTCTTGCTTGAGGCCTGCACAGGAAGCAAGTATA...ATGGTGGGGGTCTCTCACCTTCTTGACCCTCTCTCCATCATTCAGCTGCCAGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR GCA 90 bp CAACTCCCTGAATTCCAGATGGCTCATCCTAGCCAGAGCTGCTATCAGAGGAGCATGGCTGCACCCTCCTaGTTCCAAGCTTCTCCTGTG +
Preference number: 4 (lower is better)
Translates to: QLPEFQMAHPSQSCYQRSMAAPS*FQASPV
Trigger: CACAGGAGAAGCTTGGAAGCAGGAGGGTGCAGCCAT...GCTCCTCTGATAGCAGCTCTGGCTAGGATGAGCCATCTGGAATTCAGGGAGTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468944.1
CDS-3UTR GCA 90 bp TCCCTGAATTCCAGATGGCTCATCCTAGCCAGAGCTGCTATCAGAGGAGCCTCTCTGAGTGCACCAAGATaGTGGGTCCCTGGGAAAGGT +
Preference number: 4 (lower is better)
Translates to: SLNSRWLILARAAIRGASLSAPR*WVPGKG
Trigger: ACCTTTCCCAGGGACCCAGCATCTTGGTGCACTCAG...AGAGGCTCCTCTGATAGCAGCTCTGGCTAGGATGAGCCATCTGGAATTCAGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468944.1
CDS-3UTR GCA 90 bp AGTGGGAGGCCTGGGAGCAGACACGGTGGCATTTCCATGGAAACACAGGTGTGCGTAGCCTGCTGGGTGTaGTTTTCGTCACATTCTATC +
Preference number: 4 (lower is better)
Translates to: SGRPGSRHGGISMETQVCVACWV*FSSHSI
Trigger: GATAGAATGTGACGAAAAGCACACCCAGCAGGCTAC...GCACACCTGTGTTTCCATGGAAATGCCACCGTGTCTGCTCCCAGGCCTCCCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478943.5
CDS-3UTR CCA 90 bp CTAGTGGGAGGCCTGGGAGCAGACACGGTGGCATTTCCATGGAAACACAGGTGTTCGAATGGCATCCTTTaGCCCTTCCTCCGTCTCATT +
Preference number: 4 (lower is better)
Translates to: LVGGLGADTVAFPWKHRCSNGIL*PFLRLI
Trigger: AATGAGACGGAGGAAGGGCCAAAGGATGCCATTCGA...ACACCTGTGTTTCCATGGAAATGCCACCGTGTCTGCTCCCAGGCCTCCCACTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000535933.5
ENST00000540946.5
ENST00000581396.5
CDS-3UTR CCA 90 bp GGTGGCATTTCCATGGAAACACAGGTGTGCAGGCCGTGTGGAGCTGGGGATGTATCGAATGGCATCCTTTaGCCCTTCCTCCGTCTCATT +
Preference number: 4 (lower is better)
Translates to: GGISMETQVCRPCGAGDVSNGIL*PFLRLI
Trigger: AATGAGACGGAGGAAGGGCCAAAGGATGCCATTCGA...TACATCCCCAGCTCCACACGGCCTGCACACCTGTGTTTCCATGGAAATGCCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000535933.5
ENST00000540946.5
ENST00000581396.5
CDS-3UTR CCA 90 bp GGCATTTCCATGGAAACACAGGTGTGCAGGCCGTGTGGAGCTGGGGATGTAGGATCGAATGGCATCCTTTaGCCCTTCCTCCGTCTCATT +
Preference number: 4 (lower is better)
Translates to: GISMETQVCRPCGAGDVGSNGIL*PFLRLI
Trigger: AATGAGACGGAGGAAGGGCCAAAGGATGCCATTCGA...TCCTACATCCCCAGCTCCACACGGCCTGCACACCTGTGTTTCCATGGAAATGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000535933.5
ENST00000540946.5
ENST00000581396.5
CDS-3UTR CCA 90 bp GTGGGAGGGGAGAGAGTCTCTGGCTGCAGTTGTCCCACCACTCAGAGAAAAGAATCTTCAGGGCTCGAATaGCATCCTTTGGCCCTTCCT +
Preference number: 4 (lower is better)
Translates to: VGGERVSGCSCPTTQRKESSGLE*HPLALP
Trigger: AGGAAGGGCCAAAGGATGCCATTCGAGCCCTGAAGA...TTCTTTTCTCTGAGTGGTGGGACAACTGCAGCCAGAGACTCTCTCCCCTCCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000581396.5
CDS-3UTR CCA 90 bp CCTGGGAGCAGACACGGTGGCATTTCCATGGAAACACAGGTGTGCAGGCCGTGTACTTCAGGGACACTCTaGATCAGAGCAAGCACTTTG +
Preference number: 4 (lower is better)
Translates to: PGSRHGGISMETQVCRPCTSGTL*IRASTL
Trigger: CAAAGTGCTTGCTCTGATCCAGAGTGTCCCTGAAGT...ACACGGCCTGCACACCTGTGTTTCCATGGAAATGCCACCGTGTCTGCTCCCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318094.14
ENST00000395739.8
CDS-3UTR CCA 90 bp GAAAAGAAGTGGCTGAAGCTGGTCCTGACTAGTGGGAGGCCTGGGAGCAGACACGTTCACTCCGCAGCCTaGCAATCTGTTCTGAATTGG +
Preference number: 4 (lower is better)
Translates to: EKKWLKLVLTSGRPGSRHVHSAA*QSVLNW
Trigger: CCAATTCAGAACAGATTGCCAGGCTGCGGAGTGAAC...GTGTCTGCTCCCAGGCCTCCCACTAGTCAGGACCAGCTTCAGCCACTTCTTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000581396.5
CDS-3UTR CCA 90 bp AGGCCTGGGAGCAGACACGGTGGCATTTCCATGGAAACACAGGTGTGCAGGCCGTCAGTACTCCATTACTaGCATTTTGAACGGATCGGC +
Preference number: 4 (lower is better)
Translates to: RPGSRHGGISMETQVCRPSVLHY*HFERIG
Trigger: GCCGATCCGTTCAAAATGCCAGTAATGGAGTACTGA...CGGCCTGCACACCTGTGTTTCCATGGAAATGCCACCGTGTCTGCTCCCAGGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000535933.5
ENST00000540946.5
ENST00000581396.5
CDS-3UTR CCA 90 bp AGAGAAAAGAAGTGGCTGAAGCTGGTCCTGACTAGTGGGAGGCCTGGGAGCAGACGGGGATTACATTGCTaGAGTGAACTGAGGGTGCCA +
Preference number: 4 (lower is better)
Translates to: REKKWLKLVLTSGRPGSRRGLHC*SELRVP
Trigger: TGGCACCCTCAGTTCACTCCAGCAATGTAATCCCCG...TCTGCTCCCAGGCCTCCCACTAGTCAGGACCAGCTTCAGCCACTTCTTTTCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000535933.5
ENST00000581396.5
CDS-3UTR CCA 90 bp AGGGGAGAGAGTCTCTGGCTGCAGTTGTCCCACCACTCAGAGAAAAGAAGTGGCCGGGGATTACATTGCTaGAGTGAACTGAGGGTGCCA +
Preference number: 4 (lower is better)
Translates to: RGESLWLQLSHHSEKRSGRGLHC*SELRVP
Trigger: TGGCACCCTCAGTTCACTCCAGCAATGTAATCCCCG...GCCACTTCTTTTCTCTGAGTGGTGGGACAACTGCAGCCAGAGACTCTCTCCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000581396.5
CDS-3UTR CCA 90 bp GGTGGCATTTCCATGGAAACACAGGTGTGCAGGCCGTGTGGAGCTGGGGATGTAGAGTTTCCTCTCGTCTaGGCAAACATGTCAAAGCCG +
Preference number: 4 (lower is better)
Translates to: GGISMETQVCRPCGAGDVEFPLV*ANMSKP
Trigger: CGGCTTTGACATGTTTGCCCAGACGAGAGGAAACTC...TACATCCCCAGCTCCACACGGCCTGCACACCTGTGTTTCCATGGAAATGCCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000535933.5
ENST00000540946.5
ENST00000581396.5
CDS-3UTR CCA 90 bp AGCAGACACGGTGGCATTTCCATGGAAACACAGGTGTGCAGGCCGTGTGGAGCTGAGTTTCCTCTCGTCTaGGCAAACATGTCAAAGCCG +
Preference number: 4 (lower is better)
Translates to: SRHGGISMETQVCRPCGAEFPLV*ANMSKP
Trigger: CGGCTTTGACATGTTTGCCCAGACGAGAGGAAACTC...AGCTCCACACGGCCTGCACACCTGTGTTTCCATGGAAATGCCACCGTGTCTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000535933.5
ENST00000540946.5
ENST00000581396.5
CDS-3UTR CCA 90 bp CAGTTTGGTTTATTGGTAGTGTCGTCTCAGCAGCGTGCCACATGGCCACCATCTTTCTCCATGGGCGGGTaGAGGAAAGACAGTCCGGGT +
Preference number: 4 (lower is better)
Translates to: QFGLLVVSSQQRATWPPSFSMGG*RKDSPG
Trigger: ACCCGGACTGTCTTTCCTCCACCCGCCCATGGAGAA...AGATGGTGGCCATGTGGCACGCTGCTGAGACGACACTACCAATAAACCAAACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000478943.5
ENST00000581396.5
CDS-3UTR CCA 90 bp GGTGGCATTTCCATGGAAACACAGGTGTGCAGGCCGTGTGGAGCTGGGGATGTACGTCCAAGTCTGCCATaGGAAATTCAACCCCTTTCC +
Preference number: 4 (lower is better)
Translates to: GGISMETQVCRPCGAGDVRPSLP*EIQPLS
Trigger: GGAAAGGGGTTGAATTTCCCATGGCAGACTTGGACG...TACATCCCCAGCTCCACACGGCCTGCACACCTGTGTTTCCATGGAAATGCCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379504.8
ENST00000535933.5
ENST00000581396.5
CDS-3UTR CCA 90 bp CAGACACGGTGGCATTTCCATGGAAACACAGGTGTGCAGGCCGTGTGGAGCTGGAAAGCTGTTTGCTGCTaGCTCTTGAGGCAGATGTGT +
Preference number: 4 (lower is better)
Translates to: QTRWHFHGNTGVQAVWSWKAVCC*LLRQMC
Trigger: ACACATCTGCCTCAAGAGCCAGCAGCAAACAGCTTT...CCAGCTCCACACGGCCTGCACACCTGTGTTTCCATGGAAATGCCACCGTGTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR CCA 90 bp GAGCCTGCAGTGTGTGCGTGGCAGTTTGGTTTATTGGTAGTGTCGTCTCAGCAGCAACGACCATGTCGCTaGTCTCTTCTCCCGTCAAGC +
Preference number: 4 (lower is better)
Translates to: EPAVCAWQFGLLVVSSQQQRPCR*SLLPSS
Trigger: GCTTGACGGGAGAAGAGACCAGCGACATGGTCGTTG...CTGCTGAGACGACACTACCAATAAACCAAACTGCCACGCACACACTGCAGGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR CCA 90 bp GTGGGAGGGGAGAGAGTCTCTGGCTGCAGTTGTCCCACCACTCAGAGAAAAGAAACACTTCTCTCTGGGTaGGGAAGGCCTACTGTAACC +
Preference number: 4 (lower is better)
Translates to: VGGERVSGCSCPTTQRKETLLSG*GRPTVT
Trigger: GGTTACAGTAGGCCTTCCCCACCCAGAGAGAAGTGT...TTCTTTTCTCTGAGTGGTGGGACAACTGCAGCCAGAGACTCTCTCCCCTCCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR CCA 90 bp AGTGGGAGGCCTGGGAGCAGACACGGTGGCATTTCCATGGAAACACAGGTGTGCACAATGTCTCTGGGGTaGAAACACTTCTCTCTGGGT +
Preference number: 4 (lower is better)
Translates to: SGRPGSRHGGISMETQVCTMSLG*KHFSLG
Trigger: ACCCAGAGAGAAGTGTTTCCACCCCAGAGACATTGT...GCACACCTGTGTTTCCATGGAAATGCCACCGTGTCTGCTCCCAGGCCTCCCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR CCA 90 bp AGCCTGGGCTGGCAGCTGAATGATGGAGAGAGGGTCAAGAAGGTGAGAGACCCCGACAGACAATGTCTCTaGGGTGGAAACACTTCTCTC +
Preference number: 4 (lower is better)
Translates to: SLGWQLNDGERVKKVRDPDRQCL*GGNTSL
Trigger: GAGAGAAGTGTTTCCACCCCAGAGACATTGTCTGTC...GGGGTCTCTCACCTTCTTGACCCTCTCTCCATCATTCAGCTGCCAGCCCAGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR CCA 90 bp AGAGTCTCTGGCTGCAGTTGTCCCACCACTCAGAGAAAAGAAGTGGCTGAAGCTGAACACATGCACCTCTaGGTAGCCTGCTGGGTGTGC +
Preference number: 4 (lower is better)
Translates to: RVSGCSCPTTQRKEVAEAEHMHL*VACWVC
Trigger: GCACACCCAGCAGGCTACCCAGAGGTGCATGTGTTC...AGCTTCAGCCACTTCTTTTCTCTGAGTGGTGGGACAACTGCAGCCAGAGACTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478943.5
CDS-3UTR TCA 90 bp TGGCAGTTTGGTTTATTGGTAGTGTCGTCTCAGCAGCGTGCCACATGGCCACCACAACTCCAGATCAGATaGATCCTCCTGTCCAGGGAC +
Preference number: 4 (lower is better)
Translates to: WQFGLLVVSSQQRATWPPQLQIR*ILLSRD
Trigger: GTCCCTGGACAGGAGGATTCATCTGATCTGGAGTTG...TGGTGGCCATGTGGCACGCTGCTGAGACGACACTACCAATAAACCAAACTGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000581396.5
CDS-3UTR TCA 90 bp CTAGTGGGAGGCCTGGGAGCAGACACGGTGGCATTTCCATGGAAACACAGGTGTGAAGGAAGACGTTGTTaGGGTCATCGTTCACATGCA +
Preference number: 4 (lower is better)
Translates to: LVGGLGADTVAFPWKHRCEGRRC*GHRSHA
Trigger: TGCATGTGAACGATGACCTCAACAACGTCTTCCTTC...ACACCTGTGTTTCCATGGAAATGCCACCGTGTCTGCTCCCAGGCCTCCCACTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000535933.5
ENST00000540946.5
ENST00000581396.5
CDS-3UTR TCA 90 bp CTCAGAGAAAAGAAGTGGCTGAAGCTGGTCCTGACTAGTGGGAGGCCTGGGAGCGAAGGAAGACGTTGTTaGGGTCATCGTTCACATGCA +
Preference number: 4 (lower is better)
Translates to: LREKKWLKLVLTSGRPGSEGRRC*GHRSHA
Trigger: TGCATGTGAACGATGACCTCAACAACGTCTTCCTTC...GCTCCCAGGCCTCCCACTAGTCAGGACCAGCTTCAGCCACTTCTTTTCTCTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000535933.5
ENST00000581396.5
CDS-3UTR TCA 90 bp TGGCAGTTTGGTTTATTGGTAGTGTCGTCTCAGCAGCGTGCCACATGGCCACCACCATTACTGGCATTTTaGACGGATCGGCCAGACCTG +
Preference number: 4 (lower is better)
Translates to: WQFGLLVVSSQQRATWPPPLLAF*TDRPDL
Trigger: CAGGTCTGGCCGATCCGTTCAAAATGCCAGTAATGG...TGGTGGCCATGTGGCACGCTGCTGAGACGACACTACCAATAAACCAAACTGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000478943.5
ENST00000581396.5
CDS-3UTR TCA 90 bp AGAGAAAAGAAGTGGCTGAAGCTGGTCCTGACTAGTGGGAGGCCTGGGAGCAGAATTACATTGCTGGAGTaGACTGAGGGTGCCACTGAC +
Preference number: 4 (lower is better)
Translates to: REKKWLKLVLTSGRPGSRITLLE*TEGATD
Trigger: GTCAGTGGCACCCTCAGTTCACTCCAGCAATGTAAT...TCTGCTCCCAGGCCTCCCACTAGTCAGGACCAGCTTCAGCCACTTCTTTTCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000535933.5
ENST00000581396.5
CDS-3UTR TCA 90 bp GTGGGAGGGGAGAGAGTCTCTGGCTGCAGTTGTCCCACCACTCAGAGAAAAGAAATTACATTGCTGGAGTaGACTGAGGGTGCCACTGAC +
Preference number: 4 (lower is better)
Translates to: VGGERVSGCSCPTTQRKEITLLE*TEGATD
Trigger: GTCAGTGGCACCCTCAGTTCACTCCAGCAATGTAAT...TTCTTTTCTCTGAGTGGTGGGACAACTGCAGCCAGAGACTCTCTCCCCTCCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000581396.5
CDS-3UTR TCA 90 bp ATGAGTGCAGCACACCCTGCTCTTCCAGAGATGCCACAAAGCCCCTTCAGGGAGCAAACTCTTCACTTGTaGCACCCTCCTCCAGATCAT +
Preference number: 4 (lower is better)
Translates to: MSAAHPALPEMPQSPFREQTLHL*HPPPDH
Trigger: ATGATCTGGAGGAGGGTGTCACAAGTGAAGAGTTTG...CTCCCTGAAGGGGCTTTGTGGCATCTCTGGAAGAGCAGGGTGTGCTGCACTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000478943.5
ENST00000581396.5
CDS-3UTR TCA 90 bp GAAAAGAAGTGGCTGAAGCTGGTCCTGACTAGTGGGAGGCCTGGGAGCAGACACCCAAATGTCACAAGGTaGCAAGTCCAAGGAGTGAGA +
Preference number: 4 (lower is better)
Translates to: EKKWLKLVLTSGRPGSRHPNVTR*QVQGVR
Trigger: TCTCACTCCTTGGACTTGTCACCTTGTGACATTTGG...GTGTCTGCTCCCAGGCCTCCCACTAGTCAGGACCAGCTTCAGCCACTTCTTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000478943.5
ENST00000581396.5
CDS-3UTR TCA 90 bp AGCAGACACGGTGGCATTTCCATGGAAACACAGGTGTGCAGGCCGTGTGGAGCTCCAAATGTCACAAGGTaGCAAGTCCAAGGAGTGAGA +
Preference number: 4 (lower is better)
Translates to: SRHGGISMETQVCRPCGAPNVTR*QVQGVR
Trigger: TCTCACTCCTTGGACTTGTCACCTTGTGACATTTGG...AGCTCCACACGGCCTGCACACCTGTGTTTCCATGGAAATGCCACCGTGTCTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000478943.5
ENST00000581396.5
CDS-3UTR TCA 90 bp GTAACCCAAGTGGGTGAGACGTCCCCAAAGCCGACAGTGCAGAAGCTCCCAGGGACATCTCAGCAACAATaGACGCAGAAAGGGTTAAAC +
Preference number: 4 (lower is better)
Translates to: VTQVGETSPKPTVQKLPGTSQQQ*TQKGLN
Trigger: GTTTAACCCTTTCTGCGTTCATTGTTGCTGAGATGT...CCCTGGGAGCTTCTGCACTGTCGGCTTTGGGGACGTCTCACCCACTTGGGTTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR TCA 90 bp GGCCTGGGAGCAGACACGGTGGCATTTCCATGGAAACACAGGTGTGCAGGCCGTCAGAAAAGTCCCTTCTaGACTCTGTTTTCGATTGTC +
Preference number: 4 (lower is better)
Translates to: GLGADTVAFPWKHRCAGRQKSPF*TLFSIV
Trigger: GACAATCGAAAACAGAGTTCAGAAGGGACTTTTCTG...ACGGCCTGCACACCTGTGTTTCCATGGAAATGCCACCGTGTCTGCTCCCAGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535933.5
CDS-3UTR GCA 90 bp AGGGGAGAGAGTCTCTGGCTGCAGTTGTCCCACCACTCAGAGAAAAGAAGTGGCTCACGGGGATTACATTaGTGGAGTGAACTGAGGGTG +
Preference number: 4 (lower is better)
Translates to: RGESLWLQLSHHSEKRSGSRGLH*WSELRV
Trigger: CACCCTCAGTTCACTCCAGCAATGTAATCCCCGTGA...GCCACTTCTTTTCTCTGAGTGGTGGGACAACTGCAGCCAGAGACTCTCTCCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000581396.5
CDS-3UTR GCA 90 bp CTCAGAGAAAAGAAGTGGCTGAAGCTGGTCCTGACTAGTGGGAGGCCTGGGAGCCAAGACACACGGGGATaGATACAGCTGCAGTATTCT +
Preference number: 4 (lower is better)
Translates to: LREKKWLKLVLTSGRPGSQDTRG*IQLQYS
Trigger: AGAATACTGCAGCTGTATGCATCCCCGTGTGTCTTG...GCTCCCAGGCCTCCCACTAGTCAGGACCAGCTTCAGCCACTTCTTTTCTCTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR GCA 90 bp CAGTTTGGTTTATTGGTAGTGTCGTCTCAGCAGCGTGCCACATGGCCACCATCTCATAGCGCCATTCTCTaGCGCCCAGTGGCCAAAAAG +
Preference number: 4 (lower is better)
Translates to: QFGLLVVSSQQRATWPPSHSAIL*RPVAKK
Trigger: CTTTTTGGCCACTGGGCGGCAGAGAATGGCGCTATG...AGATGGTGGCCATGTGGCACGCTGCTGAGACGACACTACCAATAAACCAAACTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR GCA 90 bp CGAGTGGACAGCAAACGCGACATTCAACACATTCCTCTTTTCAGTAGCCCCCAAAGTGCTCCTCCACACTaGTCTTCCAGAGCTGCCCCA +
Preference number: 4 (lower is better)
Translates to: RVDSKRDIQHIPLFSSPQSAPPH*SSRAAP
Trigger: TGGGGCAGCTCTGGAAGAGCAGTGTGGAGGAGCACT...TTGGGGGCTACTGAAAAGAGGAATGTGTTGAATGTCGCGTTTGCTGTCCACTCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR GCA 90 bp CTAGGACGAGTGGACAGCAAACGCGACATTCAACACATTCCTCTTTTCAGTAGCCCCCAAAGCCGACAGTaGAGAAGCTCCCAGGGACCA +
Preference number: 4 (lower is better)
Translates to: LGRVDSKRDIQHIPLFSSPQSRQ*RSSQGP
Trigger: TGGTCCCTGGGAGCTTCTGCACTGTCGGCTTTGGGG...GCTACTGAAAAGAGGAATGTGTTGAATGTCGCGTTTGCTGTCCACTCGTCCTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR GCA 90 bp CCTTTGGTGGTGAAGGGTACATGGGACCTTGGGTTTCTGCTTACCCTACTGAGCTGGTGTGTCTTGCGCTaGTCAGCCAAGGAGTTTCCT +
Preference number: 4 (lower is better)
Translates to: PLVVKGTWDLGFLLTLLSWCVLR*SAKEFP
Trigger: AGGAAACTCCTTGGCTGAGCAGCGCAAGACACACCA...GCTCAGTAGGGTAAGCAGAAACCCAAGGTCCCATGTACCCTTCACCACCAAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468944.1
CDS-3UTR GCA 90 bp ACAGGTGTGCAGGCCGTGTGGAGCTGGGGATGTAGGAGTGGCCAGTGCCCGGTGATAAAACCAGACATGTaGCGAATTCAAAGTAGAAGT +
Preference number: 4 (lower is better)
Translates to: TGVQAVWSWGCRSGQCPVIKPDM*RIQSRS
Trigger: ACTTCTACTTTGAATTCGGCACATGTCTGGTTTTAT...CACCGGGCACTGGCCACTCCTACATCCCCAGCTCCACACGGCCTGCACACCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478943.5
CDS-3UTR CCA 90 bp AGAGTCTCTGGCTGCAGTTGTCCCACCACTCAGAGAAAAGAAGTGGCTGAAGCTTTGGCCACAAGGATGTaGAAGCGGTGGCCACAGTTC +
Preference number: 4 (lower is better)
Translates to: RVSGCSCPTTQRKEVAEALATRM*KRWPQF
Trigger: GAACTGTGGCCACCGCTTCCACATCCTTGTGGCCAA...AGCTTCAGCCACTTCTTTTCTCTGAGTGGTGGGACAACTGCAGCCAGAGACTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
CDS-3UTR CCA 90 bp AGAGTCTCTGGCTGCAGTTGTCCCACCACTCAGAGAAAAGAAGTGGCTGAAGCTATTGGGACCTGGGCATaGTCGCAGCTGGATCCACTT +
Preference number: 4 (lower is better)
Translates to: RVSGCSCPTTQRKEVAEAIGTWA*SQLDPL
Trigger: AAGTGGATCCAGCTGCGACCATGCCCAGGTCCCAAT...AGCTTCAGCCACTTCTTTTCTCTGAGTGGTGGGACAACTGCAGCCAGAGACTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000581396.5
CDS-3UTR CCA 90 bp CTCTTTCTCCATGGGCGGGTGGAGGAAAGACAGTCCGGGTGGTCTGCTCAGGAATCAGTACTCCATTACTaGCATTTTGAACGGATCGGC +
Preference number: 4 (lower is better)
Translates to: LFLHGRVEERQSGWSAQESVLHY*HFERIG
Trigger: GCCGATCCGTTCAAAATGCCAGTAATGGAGTACTGA...TTCCTGAGCAGACCACCCGGACTGTCTTTCCTCCACCCGCCCATGGAGAAAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000478943.5
ENST00000581396.5
CDS-3UTR CCA 90 bp CATGGATCAGGAACCTGTGCTGACCTAGGCAGTGCATGCTGGAGGGGACAGGAGTCAGTACTCCATTACTaGCATTTTGAACGGATCGGC +
Preference number: 4 (lower is better)
Translates to: HGSGTCADLGSACWRGQESVLHY*HFERIG
Trigger: GCCGATCCGTTCAAAATGCCAGTAATGGAGTACTGA...CTCCTGTCCCCTCCAGCATGCACTGCCTAGGTCAGCACAGGTTCCTGATCCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR CCA 90 bp ATGGAAACACAGGTGTGCAGGCCGTGTGGAGCTGGGGATGTAGGAGTGGCCAGTTCAGTACTCCATTACTaGCATTTTGAACGGATCGGC +
Preference number: 4 (lower is better)
Translates to: METQVCRPCGAGDVGVASSVLHY*HFERIG
Trigger: GCCGATCCGTTCAAAATGCCAGTAATGGAGTACTGA...ACTGGCCACTCCTACATCCCCAGCTCCACACGGCCTGCACACCTGTGTTTCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000535933.5
ENST00000540946.5
ENST00000581396.5
CDS-3UTR CCA 90 bp GAGCCTGCAGTGTGTGCGTGGCAGTTTGGTTTATTGGTAGTGTCGTCTCAGCAGCGGGGATTACATTGCTaGAGTGAACTGAGGGTGCCA +
Preference number: 4 (lower is better)
Translates to: EPAVCAWQFGLLVVSSQQRGLHC*SELRVP
Trigger: TGGCACCCTCAGTTCACTCCAGCAATGTAATCCCCG...CTGCTGAGACGACACTACCAATAAACCAAACTGCCACGCACACACTGCAGGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379504.8
ENST00000478943.5
ENST00000581396.5
CDS-3UTR CCA 90 bp GAAACACAGGTGTGCAGGCCGTGTGGAGCTGGGGATGTAGGAGTGGCCAGTGCCCCATTTCAGCAGCTTTaGCTCTTTCTTCAAGGAATT +
Preference number: 4 (lower is better)
Translates to: ETQVCRPCGAGDVGVASAPFQQL*LFLQGI
Trigger: AATTCCTTGAAGAAAGAGCCAAAGCTGCTGAAATGG...GGCACTGGCCACTCCTACATCCCCAGCTCCACACGGCCTGCACACCTGTGTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000535933.5
ENST00000540946.5
ENST00000581396.5
CDS-3UTR CCA 90 bp CTAGTGGGAGGCCTGGGAGCAGACACGGTGGCATTTCCATGGAAACACAGGTGTGTGTGCGTGGCAGTTTaGTTTATTGGTAGTGTCGTC +
Preference number: 4 (lower is better)
Translates to: LVGGLGADTVAFPWKHRCVCVAV*FIGSVV
Trigger: GACGACACTACCAATAAACCAAACTGCCACGCACAC...ACACCTGTGTTTCCATGGAAATGCCACCGTGTCTGCTCCCAGGCCTCCCACTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379504.8
ENST00000478943.5
ENST00000581396.5
CDS-3UTR CCA 90 bp ACAAGTCCAAGGAGTGAGACCAGGCCCATGAGTGCAGCACACCCTGCTCTTCCACCTGCAGTGTGTGCGTaGCAGTTTGGTTTATTGGTA +
Preference number: 4 (lower is better)
Translates to: TSPRSETRPMSAAHPALPPAVCA*QFGLLV
Trigger: TACCAATAAACCAAACTGCCACGCACACACTGCAGG...TGGAAGAGCAGGGTGTGCTGCACTCATGGGCCTGGTCTCACTCCTTGGACTTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379504.8
ENST00000478943.5
ENST00000581396.5
CDS-3UTR CCA 90 bp AGAGAAAAGAAGTGGCTGAAGCTGGTCCTGACTAGTGGGAGGCCTGGGAGCAGAAGGCTCCTGACTTTTTaGGACTCCTGGTTCCATGAG +
Preference number: 4 (lower is better)
Translates to: REKKWLKLVLTSGRPGSRRLLTF*DSWFHE
Trigger: CTCATGGAACCAGGAGTCCCAAAAAGTCAGGAGCCT...TCTGCTCCCAGGCCTCCCACTAGTCAGGACCAGCTTCAGCCACTTCTTTTCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR CCA 90 bp TGTCACAAGGTGACAAGTCCAAGGAGTGAGACCAGGCCCATGAGTGCAGCACACCAGCTTCACGCACTATaGAATCCCTGCTCCTTTCAG +
Preference number: 4 (lower is better)
Translates to: CHKVTSPRSETRPMSAAHQLHAL*NPCSFQ
Trigger: CTGAAAGGAGCAGGGATTCCATAGTGCGTGAAGCTG...GTGTGCTGCACTCATGGGCCTGGTCTCACTCCTTGGACTTGTCACCTTGTGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR CCA 90 bp AGCAGACACGGTGGCATTTCCATGGAAACACAGGTGTGCAGGCCGTGTGGAGCTGACAGACAATGTCTCTaGGGTGGAAACACTTCTCTC +
Preference number: 4 (lower is better)
Translates to: SRHGGISMETQVCRPCGADRQCL*GGNTSL
Trigger: GAGAGAAGTGTTTCCACCCCAGAGACATTGTCTGTC...AGCTCCACACGGCCTGCACACCTGTGTTTCCATGGAAATGCCACCGTGTCTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR CCA 90 bp CAGAACCAGCTCTGCCCACAGAAACACATGACAGTGACAAAAACACTAAACTTCGCTGGTGACGGGCACTaGGGGAGGCGAGCACTTCAG +
Preference number: 4 (lower is better)
Translates to: QNQLCPQKHMTVTKTLNFAGDGH*GRRALQ
Trigger: CTGAAGTGCTCGCCTCCCCCAGTGCCCGTCACCAGC...GAAGTTTAGTGTTTTTGTCACTGTCATGTGTTTCTGTGGGCAGAGCTGGTTCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR CCA 90 bp GCCTCTGCTCTGACCACTTATTTTAGTCAGGAAAATCTCGCTGTAAGGAATGGGAGGGGCCAGGCAGGGTaGTGTGTCTTGCGCTGCTCA +
Preference number: 4 (lower is better)
Translates to: ASALTTYFSQENLAVRNGRGQAG*CVLRCS
Trigger: TGAGCAGCGCAAGACACACCACCCTGCCTGGCCCCT...CCCATTCCTTACAGCGAGATTTTCCTGACTAAAATAAGTGGTCAGAGCAGAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000468944.1
CDS-3UTR CCA 90 bp GCCTCTGCTCTGACCACTTATTTTAGTCAGGAAAATCTCGCTGTAAGGAATGGGAGGGAAGGTGGTCTCTaGGACCCGGGCCTGTCACTG +
Preference number: 4 (lower is better)
Translates to: ASALTTYFSQENLAVRNGREGGL*DPGLSL
Trigger: CAGTGACAGGCCCGGGTCCCAGAGACCACCTTCCCT...CCCATTCCTTACAGCGAGATTTTCCTGACTAAAATAAGTGGTCAGAGCAGAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000468944.1
CDS-3UTR CCA 90 bp AGTGGGAGGCCTGGGAGCAGACACGGTGGCATTTCCATGGAAACACAGGTGTGCTGGTCTCTCTTTTTGTaGCCAACTCTCCTCTGTTGT +
Preference number: 4 (lower is better)
Translates to: SGRPGSRHGGISMETQVCWSLFL*PTLLCC
Trigger: ACAACAGAGGAGAGTTGGCCACAAAAAGAGAGACCA...GCACACCTGTGTTTCCATGGAAATGCCACCGTGTCTGCTCCCAGGCCTCCCACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000478943.5
CDS-3UTR TCA 90 bp AGAGAAAAGAAGTGGCTGAAGCTGGTCCTGACTAGTGGGAGGCCTGGGAGCAGACAAACTCTTCACTTGTaGCACCCTCCTCCAGATCAT +
Preference number: 4 (lower is better)
Translates to: REKKWLKLVLTSGRPGSRQTLHL*HPPPDH
Trigger: ATGATCTGGAGGAGGGTGTCACAAGTGAAGAGTTTG...TCTGCTCCCAGGCCTCCCACTAGTCAGGACCAGCTTCAGCCACTTCTTTTCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000535933.5
ENST00000581396.5
CDS-3UTR TCA 90 bp AACTCCCTGAATTCCAGATGGCTCATCCTAGCCAGAGCTGCTATCAGAGGAGCCGAGGAGCCTCTGCTCTaGCCACTTATTTTAGTCAGG +
Preference number: 4 (lower is better)
Translates to: NSLNSRWLILARAAIRGAEEPLL*PLILVR
Trigger: CCTGACTAAAATAAGTGGTCAGAGCAGAGGCTCCTC...GGCTCCTCTGATAGCAGCTCTGGCTAGGATGAGCCATCTGGAATTCAGGGAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468944.1
CDS-3UTR GCA 90 bp AGAGTCTCTGGCTGCAGTTGTCCCACCACTCAGAGAAAAGAAGTGGCTGAAGCTTGTCAGGAGAGTCTGTaGAAGGAGGCCAAGGCCTAT +
Preference number: 4 (lower is better)
Translates to: RVSGCSCPTTQRKEVAEACQESL*KEAKAY
Trigger: ATAGGCCTTGGCCTCCTTGCACAGACTCTCCTGACA...AGCTTCAGCCACTTCTTTTCTCTGAGTGGTGGGACAACTGCAGCCAGAGACTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR GCA 90 bp GTTTGGTTTATTGGTAGTGTCGTCTCAGCAGCGTGCCACATGGCCACCATCTGCGGGGATGCATACAGCTaGAGTATTCTCCTTCTGAGC +
Preference number: 4 (lower is better)
Translates to: VWFIGSVVSAACHMATICGDAYS*SILLLS
Trigger: GCTCAGAAGGAGAATACTGCAGCTGTATGCATCCCC...GCAGATGGTGGCCATGTGGCACGCTGCTGAGACGACACTACCAATAAACCAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR GCA 90 bp CAGAACCAGCTCTGCCCACAGAAACACATGACAGTGACAAAAACACTAAACTTCGCCAAAGGCCCATGGTaGCAGGGGCCCAACTGCACA +
Preference number: 4 (lower is better)
Translates to: QNQLCPQKHMTVTKTLNFAKGPW*QGPNCT
Trigger: TGTGCAGTTGGGCCCCTGGCACCATGGGCCTTTGGC...GAAGTTTAGTGTTTTTGTCACTGTCATGTGTTTCTGTGGGCAGAGCTGGTTCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR CCA 90 bp ATGAGTGCAGCACACCCTGCTCTTCCAGAGATGCCACAAAGCCCCTTCAGGGAGTCAGTACTCCATTACTaGCATTTTGAACGGATCGGC +
Preference number: 4 (lower is better)
Translates to: MSAAHPALPEMPQSPFRESVLHY*HFERIG
Trigger: GCCGATCCGTTCAAAATGCCAGTAATGGAGTACTGA...CTCCCTGAAGGGGCTTTGTGGCATCTCTGGAAGAGCAGGGTGTGCTGCACTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000478943.5
ENST00000581396.5
CDS-3UTR CCA 90 bp GGTGGCATTTCCATGGAAACACAGGTGTGCAGGCCGTGTGGAGCTGGGGATGTATCAGTACTCCATTACTaGCATTTTGAACGGATCGGC +
Preference number: 4 (lower is better)
Translates to: GGISMETQVCRPCGAGDVSVLHY*HFERIG
Trigger: GCCGATCCGTTCAAAATGCCAGTAATGGAGTACTGA...TACATCCCCAGCTCCACACGGCCTGCACACCTGTGTTTCCATGGAAATGCCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000535933.5
ENST00000540946.5
ENST00000581396.5
CDS-3UTR CCA 90 bp CTAGTGGGAGGCCTGGGAGCAGACACGGTGGCATTTCCATGGAAACACAGGTGTTCAGTACTCCATTACTaGCATTTTGAACGGATCGGC +
Preference number: 4 (lower is better)
Translates to: LVGGLGADTVAFPWKHRCSVLHY*HFERIG
Trigger: GCCGATCCGTTCAAAATGCCAGTAATGGAGTACTGA...ACACCTGTGTTTCCATGGAAATGCCACCGTGTCTGCTCCCAGGCCTCCCACTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000535933.5
ENST00000540946.5
ENST00000581396.5
CDS-3UTR CCA 90 bp CTGAATGCTCCCCAACGACCATGTCGCTGGTCTCTTCTCCCGTCAAGCCCAGCCCCATTTCAGCAGCTTTaGCTCTTTCTTCAAGGAATT +
Preference number: 4 (lower is better)
Translates to: LNAPQRPCRWSLLPSSPAPFQQL*LFLQGI
Trigger: AATTCCTTGAAGAAAGAGCCAAAGCTGCTGAAATGG...GGCTGGGCTTGACGGGAGAAGAGACCAGCGACATGGTCGTTGGGGAGCATTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR CCA 90 bp GGAGGCCTGGGAGCAGACACGGTGGCATTTCCATGGAAACACAGGTGTGCAGGCCCATTTCAGCAGCTTTaGCTCTTTCTTCAAGGAATT +
Preference number: 4 (lower is better)
Translates to: GGLGADTVAFPWKHRCAGPFQQL*LFLQGI
Trigger: AATTCCTTGAAGAAAGAGCCAAAGCTGCTGAAATGG...GCCTGCACACCTGTGTTTCCATGGAAATGCCACCGTGTCTGCTCCCAGGCCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000535933.5
ENST00000540946.5
ENST00000581396.5
CDS-3UTR CCA 90 bp GTGGGAGGGGAGAGAGTCTCTGGCTGCAGTTGTCCCACCACTCAGAGAAAAGAAGTGTGCGTGGCAGTTTaGTTTATTGGTAGTGTCGTC +
Preference number: 4 (lower is better)
Translates to: VGGERVSGCSCPTTQRKEVCVAV*FIGSVV
Trigger: GACGACACTACCAATAAACCAAACTGCCACGCACAC...TTCTTTTCTCTGAGTGGTGGGACAACTGCAGCCAGAGACTCTCTCCCCTCCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379504.8
ENST00000478943.5
ENST00000581396.5
CDS-3UTR CCA 90 bp AGAGAAAAGAAGTGGCTGAAGCTGGTCCTGACTAGTGGGAGGCCTGGGAGCAGACCTGCAGTGTGTGCGTaGCAGTTTGGTTTATTGGTA +
Preference number: 4 (lower is better)
Translates to: REKKWLKLVLTSGRPGSRPAVCA*QFGLLV
Trigger: TACCAATAAACCAAACTGCCACGCACACACTGCAGG...TCTGCTCCCAGGCCTCCCACTAGTCAGGACCAGCTTCAGCCACTTCTTTTCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379504.8
ENST00000478943.5
ENST00000581396.5
CDS-3UTR CCA 90 bp GGTGGCATTTCCATGGAAACACAGGTGTGCAGGCCGTGTGGAGCTGGGGATGTACCTTCAGGATCAGCTTaGGGAGAGAGTATAAATTGG +
Preference number: 4 (lower is better)
Translates to: GGISMETQVCRPCGAGDVPSGSA*GESINW
Trigger: CCAATTTATACTCTCTCCCCAAGCTGATCCTGAAGG...TACATCCCCAGCTCCACACGGCCTGCACACCTGTGTTTCCATGGAAATGCCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR CCA 90 bp CAGTTTGGTTTATTGGTAGTGTCGTCTCAGCAGCGTGCCACATGGCCACCATCTACTTTTTGGGACTCCTaGTTCCATGAGGCAGGGAGG +
Preference number: 4 (lower is better)
Translates to: QFGLLVVSSQQRATWPPSTFWDS*FHEAGR
Trigger: CCTCCCTGCCTCATGGAACCAGGAGTCCCAAAAAGT...AGATGGTGGCCATGTGGCACGCTGCTGAGACGACACTACCAATAAACCAAACTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR CCA 90 bp CGAGTGGACAGCAAACGCGACATTCAACACATTCCTCTTTTCAGTAGCCCCCAAAGGGGAAGCCTGACTTaGACCCCACAGATAGGAAGG +
Preference number: 4 (lower is better)
Translates to: RVDSKRDIQHIPLFSSPQRGSLT*TPQIGR
Trigger: CCTTCCTATCTGTGGGGTCCAAGTCAGGCTTCCCCT...TTGGGGGCTACTGAAAAGAGGAATGTGTTGAATGTCGCGTTTGCTGTCCACTCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR CCA 90 bp AACTCCCTGAATTCCAGATGGCTCATCCTAGCCAGAGCTGCTATCAGAGGAGCCGGGTACATGGGACCTTaGGTTTCTGCTTACCCTACT +
Preference number: 4 (lower is better)
Translates to: NSLNSRWLILARAAIRGAGYMGP*VSAYPT
Trigger: AGTAGGGTAAGCAGAAACCCAAGGTCCCATGTACCC...GGCTCCTCTGATAGCAGCTCTGGCTAGGATGAGCCATCTGGAATTCAGGGAGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468944.1
CDS-3UTR CCA 90 bp AACTCCCTGAATTCCAGATGGCTCATCCTAGCCAGAGCTGCTATCAGAGGAGCCGTGGTGAAGGGTACATaGGACCTTGGGTTTCTGCTT +
Preference number: 4 (lower is better)
Translates to: NSLNSRWLILARAAIRGAVVKGT*DLGFLL
Trigger: AAGCAGAAACCCAAGGTCCCATGTACCCTTCACCAC...GGCTCCTCTGATAGCAGCTCTGGCTAGGATGAGCCATCTGGAATTCAGGGAGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468944.1
CDS-3UTR TCA 90 bp CTAGGACGAGTGGACAGCAAACGCGACATTCAACACATTCCTCTTTTCAGTAGCCCTGGCAATCTGTTCTaGATTGGCTGTGATGGGGCC +
Preference number: 4 (lower is better)
Translates to: LGRVDSKRDIQHIPLFSSPGNLF*IGCDGA
Trigger: GGCCCCATCACAGCCAATTCAGAACAGATTGCCAGG...GCTACTGAAAAGAGGAATGTGTTGAATGTCGCGTTTGCTGTCCACTCGTCCTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR TCA 90 bp GTTTGGTTTATTGGTAGTGTCGTCTCAGCAGCGTGCCACATGGCCACCATCTGCGAAGGAAGACGTTGTTaGGGTCATCGTTCACATGCA +
Preference number: 4 (lower is better)
Translates to: VWFIGSVVSAACHMATICEGRRC*GHRSHA
Trigger: TGCATGTGAACGATGACCTCAACAACGTCTTCCTTC...GCAGATGGTGGCCATGTGGCACGCTGCTGAGACGACACTACCAATAAACCAAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000478943.5
ENST00000581396.5
CDS-3UTR TCA 90 bp CTAGGACGAGTGGACAGCAAACGCGACATTCAACACATTCCTCTTTTCAGTAGCATCAGGAACCTGTGCTaGCCTAGGCAGTGCATGCTG +
Preference number: 4 (lower is better)
Translates to: LGRVDSKRDIQHIPLFSSIRNLC*PRQCML
Trigger: CAGCATGCACTGCCTAGGTCAGCACAGGTTCCTGAT...GCTACTGAAAAGAGGAATGTGTTGAATGTCGCGTTTGCTGTCCACTCGTCCTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR TCA 90 bp CAACTCCCTGAATTCCAGATGGCTCATCCTAGCCAGAGCTGCTATCAGAGGAGCCACCCGCCTTTAGGCTaGACAGAAAGCTCAAAACAT +
Preference number: 4 (lower is better)
Translates to: QLPEFQMAHPSQSCYQRSHPPLG*TESSKH
Trigger: ATGTTTTGAGCTTTCTGTTCAGCCTAAAGGCGGGTG...GCTCCTCTGATAGCAGCTCTGGCTAGGATGAGCCATCTGGAATTCAGGGAGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468944.1
CDS-3UTR TCA 90 bp GATTCTCTCTTTTGGAATCAACTCCCTGAATTCCAGATGGCTCATCCTAGCCAGACCCGGGCCTGTCACTaGTTATGGGAGGTCTTCCTC +
Preference number: 4 (lower is better)
Translates to: DSLFWNQLPEFQMAHPSQTRACH*LWEVFL
Trigger: GAGGAAGACCTCCCATAATCAGTGACAGGCCCGGGT...CTGGCTAGGATGAGCCATCTGGAATTCAGGGAGTTGATTCCAAAAGAGAGAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468944.1
CDS-3UTR GCA 90 bp CAGTTTGGTTTATTGGTAGTGTCGTCTCAGCAGCGTGCCACATGGCCACCATCTTCACGGGGATTACATTaGTGGAGTGAACTGAGGGTG +
Preference number: 4 (lower is better)
Translates to: QFGLLVVSSQQRATWPPSSRGLH*WSELRV
Trigger: CACCCTCAGTTCACTCCAGCAATGTAATCCCCGTGA...AGATGGTGGCCATGTGGCACGCTGCTGAGACGACACTACCAATAAACCAAACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000478943.5
ENST00000581396.5
CDS-3UTR GCA 90 bp AGAGTCTCTGGCTGCAGTTGTCCCACCACTCAGAGAAAAGAAGTGGCTGAAGCTTATACTTGCTTCCTGTaGAGGCCTCAAGCAAGAGCC +
Preference number: 4 (lower is better)
Translates to: RVSGCSCPTTQRKEVAEAYTCFL*RPQARA
Trigger: GGCTCTTGCTTGAGGCCTGCACAGGAAGCAAGTATA...AGCTTCAGCCACTTCTTTTCTCTGAGTGGTGGGACAACTGCAGCCAGAGACTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR GCA 90 bp ATGTACAGTGCCTCCCTGAGATGTAGGAGATTCTCTCTTTTGGAATCAACTCCCCAGGGTGGTGTGTCTTaGGCTGCTCAGCCAAGGAGT +
Preference number: 4 (lower is better)
Translates to: MYSASLRCRRFSLLESTPQGGVS*AAQPRS
Trigger: ACTCCTTGGCTGAGCAGCGCAAGACACACCACCCTG...GGGAGTTGATTCCAAAAGAGAGAATCTCCTACATCTCAGGGAGGCACTGTACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000468944.1
CDS-3UTR GCA 90 bp GCCTCTGCTCTGACCACTTATTTTAGTCAGGAAAATCTCGCTGTAAGGAATGGGTTCACCCTGCATGGCTaGACCCTCCTGCTTCCAAGC +
Preference number: 4 (lower is better)
Translates to: ASALTTYFSQENLAVRNGFTLHG*TLLLPS
Trigger: GCTTGGAAGCAGGAGGGTGCAGCCATGCAGGGTGAA...CCCATTCCTTACAGCGAGATTTTCCTGACTAAAATAAGTGGTCAGAGCAGAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000468944.1
CDS-3UTR GCA 90 bp TTACAATCAACCTTTGGTGGTGAAGGGTACATGGGACCTTGGGTTTCTGCTTACACTCAGGGTGCTGAGTaGACCAAGATGCTGGGTCCC +
Preference number: 4 (lower is better)
Translates to: LQSTFGGEGYMGPWVSAYTQGAE*TKMLGP
Trigger: GGGACCCAGCATCTTGGTGCACTCAGCACCCTGAGT...GTAAGCAGAAACCCAAGGTCCCATGTACCCTTCACCACCAAAGGTTGATTGTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468944.1
CDS-3UTR GCA 90 bp AGGGGAGAGAGTCTCTGGCTGCAGTTGTCCCACCACTCAGAGAAAAGAAGTGGCTCACTTGGTACAGACTaGCTCATTCCTTTCTGTGTG +
Preference number: 4 (lower is better)
Translates to: RGESLWLQLSHHSEKRSGSLGTD*LIPFCV
Trigger: CACACAGAAAGGAATGAGGCAGTCTGTACCAAGTGA...GCCACTTCTTTTCTCTGAGTGGTGGGACAACTGCAGCCAGAGACTCTCTCCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478943.5
CDS-3UTR CCA 90 bp AGAGTCTCTGGCTGCAGTTGTCCCACCACTCAGAGAAAAGAAGTGGCTGAAGCTGTTCACTCCGCAGCCTaGCAATCTGTTCTGAATTGG +
Preference number: 4 (lower is better)
Translates to: RVSGCSCPTTQRKEVAEAVHSAA*QSVLNW
Trigger: CCAATTCAGAACAGATTGCCAGGCTGCGGAGTGAAC...AGCTTCAGCCACTTCTTTTCTCTGAGTGGTGGGACAACTGCAGCCAGAGACTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000581396.5
CDS-3UTR CCA 90 bp CCTGGGAGCAGACACGGTGGCATTTCCATGGAAACACAGGTGTGCAGGCCGTGTCCATTTCAGCAGCTTTaGCTCTTTCTTCAAGGAATT +
Preference number: 4 (lower is better)
Translates to: PGSRHGGISMETQVCRPCPFQQL*LFLQGI
Trigger: AATTCCTTGAAGAAAGAGCCAAAGCTGCTGAAATGG...ACACGGCCTGCACACCTGTGTTTCCATGGAAATGCCACCGTGTCTGCTCCCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000535933.5
ENST00000540946.5
ENST00000581396.5
CDS-3UTR CCA 90 bp GTGGGAGGGGAGAGAGTCTCTGGCTGCAGTTGTCCCACCACTCAGAGAAAAGAACCTTCAGGATCAGCTTaGGGAGAGAGTATAAATTGG +
Preference number: 4 (lower is better)
Translates to: VGGERVSGCSCPTTQRKEPSGSA*GESINW
Trigger: CCAATTTATACTCTCTCCCCAAGCTGATCCTGAAGG...TTCTTTTCTCTGAGTGGTGGGACAACTGCAGCCAGAGACTCTCTCCCCTCCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR CCA 90 bp CAGAACCAGCTCTGCCCACAGAAACACATGACAGTGACAAAAACACTAAACTTCCACTCACGGAGAGGCTaGTGGGCCTTGAGAGTCCAG +
Preference number: 4 (lower is better)
Translates to: QNQLCPQKHMTVTKTLNFHSRRG*WALRVQ
Trigger: CTGGACTCTCAAGGCCCACCAGCCTCTCCGTGAGTG...GAAGTTTAGTGTTTTTGTCACTGTCATGTGTTTCTGTGGGCAGAGCTGGTTCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR CCA 90 bp GGAATCAACTCCCTGAATTCCAGATGGCTCATCCTAGCCAGAGCTGCTATCAGATCTCGCTGTAAGGAATaGGTTCACCCTGCATGGCTG +
Preference number: 4 (lower is better)
Translates to: GINSLNSRWLILARAAIRSRCKE*VHPAWL
Trigger: CAGCCATGCAGGGTGAACCCATTCCTTACAGCGAGA...TCTGATAGCAGCTCTGGCTAGGATGAGCCATCTGGAATTCAGGGAGTTGATTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468944.1
CDS-3UTR CCA 90 bp AGCCTGGGCTGGCAGCTGAATGATGGAGAGAGGGTCAAGAAGGTGAGAGACCCCTGGACATTTAGATTGTaGTCTCTCTTTTTGTGGCCA +
Preference number: 4 (lower is better)
Translates to: SLGWQLNDGERVKKVRDPWTFRL*SLFLWP
Trigger: TGGCCACAAAAAGAGAGACCACAATCTAAATGTCCA...GGGGTCTCTCACCTTCTTGACCCTCTCTCCATCATTCAGCTGCCAGCCCAGGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000478943.5
CDS-3UTR CCA 90 bp CATGGAAACACAGGTGTGCAGGCCGTGTGGAGCTGGGGATGTAGGAGTGGCCAGCCATTCTTCTATTGCTaGACATTTAGATTGTGGTCT +
Preference number: 4 (lower is better)
Translates to: HGNTGVQAVWSWGCRSGQPFFYC*TFRLWS
Trigger: AGACCACAATCTAAATGTCCAGCAATAGAAGAATGG...CTGGCCACTCCTACATCCCCAGCTCCACACGGCCTGCACACCTGTGTTTCCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478943.5
CDS-3UTR TCA 90 bp CCTGGGAAAGGTGGGAAAAAGTGTGTTTCACCCGCCTTTAGGCTGAACAGAAAGTGTACAGTGCCTCCCTaGGATGTAGGAGATTCTCTC +
Preference number: 4 (lower is better)
Translates to: PGKGGKKCVSPAFRLNRKCTVPP*DVGDSL
Trigger: GAGAGAATCTCCTACATCTCAGGGAGGCACTGTACA...CTTTCTGTTCAGCCTAAAGGCGGGTGAAACACACTTTTTCCCACCTTTCCCAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000468944.1
CDS-3UTR TCA 90 bp GATTCTCTCTTTTGGAATCAACTCCCTGAATTCCAGATGGCTCATCCTAGCCAGAGCCTCAGTGGCATTTaGCAGGGAAGGTGGTCTCTG +
Preference number: 4 (lower is better)
Translates to: DSLFWNQLPEFQMAHPSQSLSGI*QGRWSL
Trigger: CAGAGACCACCTTCCCTGTCAAATGCCACTGAGGCT...CTGGCTAGGATGAGCCATCTGGAATTCAGGGAGTTGATTCCAAAAGAGAGAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468944.1
CDS-3UTR CCA 90 bp CAGAACCAGCTCTGCCCACAGAAACACATGACAGTGACAAAAACACTAAACTTCGCTGTGATTGGGACCTaGGCATGGTCGCAGCTGGAT +
Preference number: 4 (lower is better)
Translates to: QNQLCPQKHMTVTKTLNFAVIGT*AWSQLD
Trigger: ATCCAGCTGCGACCATGCCCAGGTCCCAATCACAGC...GAAGTTTAGTGTTTTTGTCACTGTCATGTGTTTCTGTGGGCAGAGCTGGTTCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR CCA 90 bp TGGCATTTCCATGGAAACACAGGTGTGCAGGCCGTGTGGAGCTGGGGATGTAGGCCATTTCAGCAGCTTTaGCTCTTTCTTCAAGGAATT +
Preference number: 4 (lower is better)
Translates to: WHFHGNTGVQAVWSWGCRPFQQL*LFLQGI
Trigger: AATTCCTTGAAGAAAGAGCCAAAGCTGCTGAAATGG...CCTACATCCCCAGCTCCACACGGCCTGCACACCTGTGTTTCCATGGAAATGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000535933.5
ENST00000540946.5
ENST00000581396.5
CDS-3UTR CCA 90 bp CTAGTGGGAGGCCTGGGAGCAGACACGGTGGCATTTCCATGGAAACACAGGTGTCCATTTCAGCAGCTTTaGCTCTTTCTTCAAGGAATT +
Preference number: 4 (lower is better)
Translates to: LVGGLGADTVAFPWKHRCPFQQL*LFLQGI
Trigger: AATTCCTTGAAGAAAGAGCCAAAGCTGCTGAAATGG...ACACCTGTGTTTCCATGGAAATGCCACCGTGTCTGCTCCCAGGCCTCCCACTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000535933.5
ENST00000540946.5
ENST00000581396.5
CDS-3UTR CCA 90 bp GAGCCTGCAGTGTGTGCGTGGCAGTTTGGTTTATTGGTAGTGTCGTCTCAGCAGGTAGGCAGGAGGGAATaGTTAGTTTTCACATCTCAG +
Preference number: 4 (lower is better)
Translates to: EPAVCAWQFGLLVVSSQQVGRRE*LVFTSQ
Trigger: CTGAGATGTGAAAACTAACCATTCCCTCCTGCCTAC...CTGCTGAGACGACACTACCAATAAACCAAACTGCCACGCACACACTGCAGGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR CCA 90 bp GTGGGAGGGGAGAGAGTCTCTGGCTGCAGTTGTCCCACCACTCAGAGAAAAGAACCATTTCAGCAGCTTTaGCTCTTTCTTCAAGGAATT +
Preference number: 4 (lower is better)
Translates to: VGGERVSGCSCPTTQRKEPFQQL*LFLQGI
Trigger: AATTCCTTGAAGAAAGAGCCAAAGCTGCTGAAATGG...TTCTTTTCTCTGAGTGGTGGGACAACTGCAGCCAGAGACTCTCTCCCCTCCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000581396.5
CDS-3UTR CCA 90 bp CAGAACCAGCTCTGCCCACAGAAACACATGACAGTGACAAAAACACTAAACTTCCGTGCTCTTTCTCCATaGGCGGGTGGAGGAAAGACA +
Preference number: 4 (lower is better)
Translates to: QNQLCPQKHMTVTKTLNFRALSP*AGGGKT
Trigger: TGTCTTTCCTCCACCCGCCCATGGAGAAAGAGCACG...GAAGTTTAGTGTTTTTGTCACTGTCATGTGTTTCTGTGGGCAGAGCTGGTTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR CCA 90 bp CAGAACCAGCTCTGCCCACAGAAACACATGACAGTGACAAAAACACTAAACTTCAGGCCTCTCAGTCACTaGGAACCTCCAAGGATGCCA +
Preference number: 4 (lower is better)
Translates to: QNQLCPQKHMTVTKTLNFRPLSH*EPPRMP
Trigger: TGGCATCCTTGGAGGTTCCCAGTGACTGAGAGGCCT...GAAGTTTAGTGTTTTTGTCACTGTCATGTGTTTCTGTGGGCAGAGCTGGTTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR CCA 90 bp GATTCTCTCTTTTGGAATCAACTCCCTGAATTCCAGATGGCTCATCCTAGCCAGTCCCTGAATTCCAGATaGCTCATCCTAGCCAGAGCT +
Preference number: 4 (lower is better)
Translates to: DSLFWNQLPEFQMAHPSQSLNSR*LILARA
Trigger: AGCTCTGGCTAGGATGAGCCATCTGGAATTCAGGGA...CTGGCTAGGATGAGCCATCTGGAATTCAGGGAGTTGATTCCAAAAGAGAGAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468944.1
CDS-3UTR GCA 90 bp CAGAACCAGCTCTGCCCACAGAAACACATGACAGTGACAAAAACACTAAACTTCTCACGGGGATTACATTaGTGGAGTGAACTGAGGGTG +
Preference number: 4 (lower is better)
Translates to: QNQLCPQKHMTVTKTLNFSRGLH*WSELRV
Trigger: CACCCTCAGTTCACTCCAGCAATGTAATCCCCGTGA...GAAGTTTAGTGTTTTTGTCACTGTCATGTGTTTCTGTGGGCAGAGCTGGTTCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR GCA 90 bp CAGAACCAGCTCTGCCCACAGAAACACATGACAGTGACAAAAACACTAAACTTCCTCCAGAACCAGCTCTaGCCACAGAAACACATGACA +
Preference number: 4 (lower is better)
Translates to: QNQLCPQKHMTVTKTLNFLQNQL*PQKHMT
Trigger: TGTCATGTGTTTCTGTGGGCAGAGCTGGTTCTGGAG...GAAGTTTAGTGTTTTTGTCACTGTCATGTGTTTCTGTGGGCAGAGCTGGTTCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR CCA 90 bp CAGAACCAGCTCTGCCCACAGAAACACATGACAGTGACAAAAACACTAAACTTCGTGAACCTGAGCAACTaGAGTGAGACATCCCAGCTA +
Preference number: 4 (lower is better)
Translates to: QNQLCPQKHMTVTKTLNFVNLSN*SETSQL
Trigger: TAGCTGGGATGTCTCACTCCAGTTGCTCAGGTTCAC...GAAGTTTAGTGTTTTTGTCACTGTCATGTGTTTCTGTGGGCAGAGCTGGTTCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS CCA 90 bp GGCCAGTGCCCGGTGTCCACGGGGTGCGAGCGGGGACCCGCCATCTaGGGAGGCAAACCACAGAGCTGCTCACAGGGCGAAGAGGGCATC +
Preference number: 5 (lower is better)
Translates to: GQCPVSTGCERGPAI*GGKPQSCSQGEEGI
Trigger: GATGCCCTCTTCGCCCTGTGAGCAGCTCTGTGGTTTGCCTCCCCAGATGGCGGGTCCCCGCTCGCACCCCGTGGACACCGGGCACTGGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000486413.1
ENST00000535933.5
ENST00000540946.5
ENST00000577794.1
ENST00000581396.5
CDS-3UTR CAA 90 bp GGAGTGGCCAGTGCCCGGTGTCCACGGGGTGCGAGCGGGGACCCGCCATCTGGGTCGGTGACCTCCTCATaGGACACGCGGGAGATGAGC +
Preference number: 5 (lower is better)
Translates to: GVASARCPRGASGDPPSGSVTSS*DTREMS
Trigger: GCTCATCTCCCGCGTGTCCAATGAGGAGGTCACCGA...CCCAGATGGCGGGTCCCCGCTCGCACCCCGTGGACACCGGGCACTGGCCACTCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000535933.5
ENST00000540946.5
ENST00000581396.5
CDS-3UTR CAA 90 bp GTGCAGGCCGTGTGGAGCTGGGGATGTAGGAGTGGCCAGTGCCCGGTGTCCACGGCCCGACAGGTCCTGTaGAGCTCCTGCAGCAACTCC +
Preference number: 5 (lower is better)
Translates to: VQAVWSWGCRSGQCPVSTARQVL*SSCSNS
Trigger: GGAGTTGCTGCAGGAGCTCAACAGGACCTGTCGGGC...CGTGGACACCGGGCACTGGCCACTCCTACATCCCCAGCTCCACACGGCCTGCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000535933.5
ENST00000540946.5
ENST00000581396.5
CDS-3UTR CAA 90 bp AGGCCGTGTGGAGCTGGGGATGTAGGAGTGGCCAGTGCCCGGTGTCCACGGGGTGCCCGACAGGTCCTGTaGAGCTCCTGCAGCAACTCC +
Preference number: 5 (lower is better)
Translates to: RPCGAGDVGVASARCPRGARQVL*SSCSNS
Trigger: GGAGTTGCTGCAGGAGCTCAACAGGACCTGTCGGGC...ACCCCGTGGACACCGGGCACTGGCCACTCCTACATCCCCAGCTCCACACGGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000535933.5
ENST00000540946.5
ENST00000581396.5
CDS-3UTR CAA 90 bp AGGGCGGGGCCGGGCGTGCTCTTTCTCCATGGGCGGGTGGAGGAAAGACAGTCCGCAGGGAGCCATCTGTaGCCTTTTCGAGGCACTGCC +
Preference number: 5 (lower is better)
Translates to: RAGPGVLFLHGRVEERQSAGSHL*PFRGTA
Trigger: GGCAGTGCCTCGAAAAGGCAACAGATGGCTCCCTGC...GGACTGTCTTTCCTCCACCCGCCCATGGAGAAAGAGCACGCCCGGCCCCGCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000581396.5
CDS-3UTR CAA 90 bp AGGGCGGGGCCGGGCGTGCTCTTTCTCCATGGGCGGGTGGAGGAAAGACAGTCCTCGGTGACCTCCTCATaGGACACGCGGGAGATGAGC +
Preference number: 5 (lower is better)
Translates to: RAGPGVLFLHGRVEERQSSVTSS*DTREMS
Trigger: GCTCATCTCCCGCGTGTCCAATGAGGAGGTCACCGA...GGACTGTCTTTCCTCCACCCGCCCATGGAGAAAGAGCACGCCCGGCCCCGCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000478943.5
ENST00000581396.5
CDS-3UTR CAA 90 bp GGAGTGGCCAGTGCCCGGTGTCCACGGGGTGCGAGCGGGGACCCGCCATCTGGGCGAAGGAAGACGTTGTaGAGGTCATCGTTCACATGC +
Preference number: 5 (lower is better)
Translates to: GVASARCPRGASGDPPSGRRKTL*RSSFTC
Trigger: GCATGTGAACGATGACCTCAACAACGTCTTCCTTCG...CCCAGATGGCGGGTCCCCGCTCGCACCCCGTGGACACCGGGCACTGGCCACTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000535933.5
ENST00000540946.5
ENST00000581396.5
CDS-3UTR CAA 90 bp CAGGTGTGCAGGCCGTGTGGAGCTGGGGATGTAGGAGTGGCCAGTGCCCGGTGTCTGTGTTCCCCACCATaGGGCTCACCACGGCTGGAG +
Preference number: 5 (lower is better)
Translates to: QVCRPCGAGDVGVASARCLCSPP*GSPRLE
Trigger: CTCCAGCCGTGGTGAGCCCAATGGTGGGGAACACAG...ACACCGGGCACTGGCCACTCCTACATCCCCAGCTCCACACGGCCTGCACACCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000535933.5
ENST00000540946.5
ENST00000581396.5
CDS-3UTR CAA 90 bp ACAGGTGTGCAGGCCGTGTGGAGCTGGGGATGTAGGAGTGGCCAGTGCCCGGTGCTGTGTTCCCCACCATaGGGCTCACCACGGCTGGAG +
Preference number: 5 (lower is better)
Translates to: TGVQAVWSWGCRSGQCPVLCSPP*GSPRLE
Trigger: CTCCAGCCGTGGTGAGCCCAATGGTGGGGAACACAG...CACCGGGCACTGGCCACTCCTACATCCCCAGCTCCACACGGCCTGCACACCTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000535933.5
ENST00000540946.5
ENST00000581396.5
CDS-3UTR CAA 90 bp AACACAGGTGTGCAGGCCGTGTGGAGCTGGGGATGTAGGAGTGGCCAGTGCCCGAAAGCTGCCTGGGCCTaGGGGCCTGCCAGACGTGGT +
Preference number: 5 (lower is better)
Translates to: NTGVQAVWSWGCRSGQCPKAAWA*GPARRG
Trigger: ACCACGTCTGGCAGGCCCCAAGGCCCAGGCAGCTTT...CGGGCACTGGCCACTCCTACATCCCCAGCTCCACACGGCCTGCACACCTGTGTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478943.5
CDS-3UTR CAA 90 bp GGTGCCAGGGGCCCAACTGCACATAGCGCCATTCTCTGCCGCCCAGTGGCCAAAGCCCGACAGGTCCTGTaGAGCTCCTGCAGCAACTCC +
Preference number: 5 (lower is better)
Translates to: GARGPTAHSAILCRPVAKARQVL*SSCSNS
Trigger: GGAGTTGCTGCAGGAGCTCAACAGGACCTGTCGGGC...TTTGGCCACTGGGCGGCAGAGAATGGCGCTATGTGCAGTTGGGCCCCTGGCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR CAA 90 bp CCAGTGGGGTGGATGGATGCTCTGAGCCTCGGGTGCACTGACCCACCCTCCAGACTGTGTTCCCCACCATaGGGCTCACCACGGCTGGAG +
Preference number: 5 (lower is better)
Translates to: PVGWMDALSLGCTDPPSRLCSPP*GSPRLE
Trigger: CTCCAGCCGTGGTGAGCCCAATGGTGGGGAACACAG...TCTGGAGGGTGGGTCAGTGCACCCGAGGCTCAGAGCATCCATCCACCCCACTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR CAA 90 bp GGTGCCAGGGGCCCAACTGCACATAGCGCCATTCTCTGCCGCCCAGTGGCCAAACTGTGTTCCCCACCATaGGGCTCACCACGGCTGGAG +
Preference number: 5 (lower is better)
Translates to: GARGPTAHSAILCRPVAKLCSPP*GSPRLE
Trigger: CTCCAGCCGTGGTGAGCCCAATGGTGGGGAACACAG...TTTGGCCACTGGGCGGCAGAGAATGGCGCTATGTGCAGTTGGGCCCCTGGCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR CAA 90 bp CATGGAAACACAGGTGTGCAGGCCGTGTGGAGCTGGGGATGTAGGAGTGGCCAGGGCCATGTGGAGCCCTaGCCCCAACTCTCCGGGCTG +
Preference number: 5 (lower is better)
Translates to: HGNTGVQAVWSWGCRSGQGHVEP*PQLSGL
Trigger: CAGCCCGGAGAGTTGGGGCAAGGGCTCCACATGGCC...CTGGCCACTCCTACATCCCCAGCTCCACACGGCCTGCACACCTGTGTTTCCATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR CAA 90 bp ACAGGGCGGGGCCGGGCGTGCTCTTTCTCCATGGGCGGGTGGAGGAAAGACAGTGAGCATCTGTTGCCCTaGGGCCATGTGGAGCCCTTG +
Preference number: 5 (lower is better)
Translates to: TGRGRACSFSMGGWRKDSEHLLP*GHVEPL
Trigger: CAAGGGCTCCACATGGCCCAAGGGCAACAGATGCTC...ACTGTCTTTCCTCCACCCGCCCATGGAGAAAGAGCACGCCCGGCCCCGCCCTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR CAA 90 bp GTGCAGGCCGTGTGGAGCTGGGGATGTAGGAGTGGCCAGTGCCCGGTGTCCACGCAGGGGAAGCCTGACTaGGACCCCACAGATAGGAAG +
Preference number: 5 (lower is better)
Translates to: VQAVWSWGCRSGQCPVSTQGKPD*DPTDRK
Trigger: CTTCCTATCTGTGGGGTCCAAGTCAGGCTTCCCCTG...CGTGGACACCGGGCACTGGCCACTCCTACATCCCCAGCTCCACACGGCCTGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS TCA 90 bp ACCCTGCATGGCTGCACCCTCCTGCTTCCAAGCTTCTCCTGTGGATaGGGGGCCAGGCAGGGTGGTGTGTCTTGCGCTGCTCAGCCAAGG +
Preference number: 5 (lower is better)
Translates to: TLHGCTLLLPSFSCG*GARQGGVSCAAQPR
Trigger: CCTTGGCTGAGCAGCGCAAGACACACCACCCTGCCTGGCCCCTCATCCACAGGAGAAGCTTGGAAGCAGGAGGGTGCAGCCATGCAGGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000468944.1
CDS GCA 90 bp AGGTCGGTCCTGAGCCACACCTCAATGTCGTCCATGACAGATGGCTaGGCAACGGGGATCTATGGAGGCGGCAAGCAGCGGGCCAGGCAG +
Preference number: 5 (lower is better)
Translates to: RSVLSHTSMSSMTDG*ATGIYGGGKQRARQ
Trigger: CTGCCTGGCCCGCTGCTTGCCGCCTCCATAGATCCCCGTTGCGCAGCCATCTGTCATGGACGACATTGAGGTGTGGCTCAGGACCGACCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486413.1
CDS CCA 90 bp GTTCACCCTGCATGGCTGCACCCTCCTGCTTCCAAGCTTCTCCTGTaGATGAGGGGCCAGGCAGGGTGGTGTGTCTTGCGCTGCTCAGCC +
Preference number: 5 (lower is better)
Translates to: VHPAWLHPPASKLLL*MRGQAGWCVLRCSA
Trigger: GGCTGAGCAGCGCAAGACACACCACCCTGCCTGGCCCCTCATCCACAGGAGAAGCTTGGAAGCAGGAGGGTGCAGCCATGCAGGGTGAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468944.1
CDS-3UTR CAA 90 bp GTGTGGAGCTGGGGATGTAGGAGTGGCCAGTGCCCGGTGTCCACGGGGTGCGAGCTCGAATGGCATCCTTaGGCCCTTCCTCCGTCTCAT +
Preference number: 5 (lower is better)
Translates to: VWSWGCRSGQCPVSTGCELEWHP*ALPPSH
Trigger: ATGAGACGGAGGAAGGGCCAAAGGATGCCATTCGAG...CTCGCACCCCGTGGACACCGGGCACTGGCCACTCCTACATCCCCAGCTCCACAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000535933.5
ENST00000540946.5
ENST00000581396.5
CDS-3UTR CAA 90 bp CCCAGGAGGGCAGAATGCCTGAGAAGGTCGCTGAGCCAGGCAGAGGTGAGCACACTGTGTTCCCCACCATaGGGCTCACCACGGCTGGAG +
Preference number: 5 (lower is better)
Translates to: PRRAECLRRSLSQAEVSTLCSPP*GSPRLE
Trigger: CTCCAGCCGTGGTGAGCCCAATGGTGGGGAACACAG...TGTGCTCACCTCTGCCTGGCTCAGCGACCTTCTCAGGCATTCTGCCCTCCTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000478943.5
ENST00000581396.5
CDS-3UTR CAA 90 bp GGCCAGACTGTCAGGAGAGTCTGTGCAAGGAGGCCAAGGCCTATGCCAGGGAGCGATGACCCGAGTCCCTaGCCCATGGCCAGGAGACAC +
Preference number: 5 (lower is better)
Translates to: GQTVRRVCARRPRPMPGSDDPSP*PMARRH
Trigger: GTGTCTCCTGGCCATGGGCAAGGGACTCGGGTCATC...GCTCCCTGGCATAGGCCTTGGCCTCCTTGCACAGACTCTCCTGACAGTCTGGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR CAA 90 bp GCCATCCTGAATGCTCCCCAACGACCATGTCGCTGGTCTCTTCTCCCGTCAAGCGGCCATGTGGAGCCCTaGCCCCAACTCTCCGGGCTG +
Preference number: 5 (lower is better)
Translates to: AILNAPQRPCRWSLLPSSGHVEP*PQLSGL
Trigger: CAGCCCGGAGAGTTGGGGCAAGGGCTCCACATGGCC...GCTTGACGGGAGAAGAGACCAGCGACATGGTCGTTGGGGAGCATTCAGGATGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR CAA 90 bp GGTGCCAGGGGCCCAACTGCACATAGCGCCATTCTCTGCCGCCCAGTGGCCAAAGAGCATCTGTTGCCCTaGGGCCATGTGGAGCCCTTG +
Preference number: 5 (lower is better)
Translates to: GARGPTAHSAILCRPVAKEHLLP*GHVEPL
Trigger: CAAGGGCTCCACATGGCCCAAGGGCAACAGATGCTC...TTTGGCCACTGGGCGGCAGAGAATGGCGCTATGTGCAGTTGGGCCCCTGGCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS CCA 90 bp CTTCAGGTCGGTCCTGAGCCACACCTCAATGTCGTCCATGACAGATaGCTGCGCAACGGGGATCTATGGAGGCGGCAAGCAGCGGGCCAG +
Preference number: 5 (lower is better)
Translates to: LQVGPEPHLNVVHDR*LRNGDLWRRQAAGQ
Trigger: CTGGCCCGCTGCTTGCCGCCTCCATAGATCCCCGTTGCGCAGCCATCTGTCATGGACGACATTGAGGTGTGGCTCAGGACCGACCTGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486413.1
CDS-3UTR CAA 90 bp GTGTGCAGGCCGTGTGGAGCTGGGGATGTAGGAGTGGCCAGTGCCCGGTGTCCACTCGAATGGCATCCTTaGGCCCTTCCTCCGTCTCAT +
Preference number: 5 (lower is better)
Translates to: VCRPCGAGDVGVASARCPLEWHP*ALPPSH
Trigger: ATGAGACGGAGGAAGGGCCAAAGGATGCCATTCGAG...TGGACACCGGGCACTGGCCACTCCTACATCCCCAGCTCCACACGGCCTGCACAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000535933.5
ENST00000540946.5
ENST00000581396.5
CDS-3UTR CAA 90 bp GGCCAGACTGTCAGGAGAGTCTGTGCAAGGAGGCCAAGGCCTATGCCAGGGAGCGCACCGGGGCTATACTaGCTTCCTGTGCAGGCCTCA +
Preference number: 5 (lower is better)
Translates to: GQTVRRVCARRPRPMPGSAPGLY*LPVQAS
Trigger: TGAGGCCTGCACAGGAAGCAAGTATAGCCCCGGTGC...GCTCCCTGGCATAGGCCTTGGCCTCCTTGCACAGACTCTCCTGACAGTCTGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR CAA 90 bp GGCCTGGGAGCAGACACGGTGGCATTTCCATGGAAACACAGGTGTGCAGGCCGTGCAGGGAGCCATCTGTaGCCTTTTCGAGGCACTGCC +
Preference number: 5 (lower is better)
Translates to: GLGADTVAFPWKHRCAGRAGSHL*PFRGTA
Trigger: GGCAGTGCCTCGAAAAGGCAACAGATGGCTCCCTGC...ACGGCCTGCACACCTGTGTTTCCATGGAAATGCCACCGTGTCTGCTCCCAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000535933.5
ENST00000540946.5
ENST00000581396.5
CDS-3UTR CAA 90 bp GTGTGGAGCTGGGGATGTAGGAGTGGCCAGTGCCCGGTGTCCACGGGGTGCGAGTCGATGAAATCTCGGTaGGCCACAAGGATGTGGAAG +
Preference number: 5 (lower is better)
Translates to: VWSWGCRSGQCPVSTGCESMKSR*ATRMWK
Trigger: CTTCCACATCCTTGTGGCCAACCGAGATTTCATCGA...CTCGCACCCCGTGGACACCGGGCACTGGCCACTCCTACATCCCCAGCTCCACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000535933.5
ENST00000540946.5
CDS-3UTR CAA 90 bp CTGGGCTGGCAGCTGAATGATGGAGAGAGGGTCAAGAAGGTGAGAGACCCCCACGCCCGACAGGTCCTGTaGAGCTCCTGCAGCAACTCC +
Preference number: 5 (lower is better)
Translates to: LGWQLNDGERVKKVRDPHARQVL*SSCSNS
Trigger: GGAGTTGCTGCAGGAGCTCAACAGGACCTGTCGGGC...GTGGGGGTCTCTCACCTTCTTGACCCTCTCTCCATCATTCAGCTGCCAGCCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000581396.5
CDS-3UTR CAA 90 bp ATGGAAACACAGGTGTGCAGGCCGTGTGGAGCTGGGGATGTAGGAGTGGCCAGTGCCCGACAGGTCCTGTaGAGCTCCTGCAGCAACTCC +
Preference number: 5 (lower is better)
Translates to: METQVCRPCGAGDVGVASARQVL*SSCSNS
Trigger: GGAGTTGCTGCAGGAGCTCAACAGGACCTGTCGGGC...ACTGGCCACTCCTACATCCCCAGCTCCACACGGCCTGCACACCTGTGTTTCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000535933.5
ENST00000540946.5
ENST00000581396.5
CDS-3UTR CAA 90 bp CATGGATCAGGAACCTGTGCTGACCTAGGCAGTGCATGCTGGAGGGGACAGGAGGCCCGACAGGTCCTGTaGAGCTCCTGCAGCAACTCC +
Preference number: 5 (lower is better)
Translates to: HGSGTCADLGSACWRGQEARQVL*SSCSNS
Trigger: GGAGTTGCTGCAGGAGCTCAACAGGACCTGTCGGGC...CTCCTGTCCCCTCCAGCATGCACTGCCTAGGTCAGCACAGGTTCCTGATCCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR CAA 90 bp CATGGAAACACAGGTGTGCAGGCCGTGTGGAGCTGGGGATGTAGGAGTGGCCAGTCGGTGACCTCCTCATaGGACACGCGGGAGATGAGC +
Preference number: 5 (lower is better)
Translates to: HGNTGVQAVWSWGCRSGQSVTSS*DTREMS
Trigger: GCTCATCTCCCGCGTGTCCAATGAGGAGGTCACCGA...CTGGCCACTCCTACATCCCCAGCTCCACACGGCCTGCACACCTGTGTTTCCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000535933.5
ENST00000540946.5
ENST00000581396.5
CDS-3UTR CAA 90 bp GTGCAGGCCGTGTGGAGCTGGGGATGTAGGAGTGGCCAGTGCCCGGTGTCCACGCGAAGGAAGACGTTGTaGAGGTCATCGTTCACATGC +
Preference number: 5 (lower is better)
Translates to: VQAVWSWGCRSGQCPVSTRRKTL*RSSFTC
Trigger: GCATGTGAACGATGACCTCAACAACGTCTTCCTTCG...CGTGGACACCGGGCACTGGCCACTCCTACATCCCCAGCTCCACACGGCCTGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000535933.5
ENST00000540946.5
ENST00000581396.5
CDS-3UTR CAA 90 bp TGCAGGCCGTGTGGAGCTGGGGATGTAGGAGTGGCCAGTGCCCGGTGTCCACGGTCCATTACTGGCATTTaGAACGGATCGGCCAGACCT +
Preference number: 5 (lower is better)
Translates to: CRPCGAGDVGVASARCPRSITGI*NGSARP
Trigger: AGGTCTGGCCGATCCGTTCAAAATGCCAGTAATGGA...CCGTGGACACCGGGCACTGGCCACTCCTACATCCCCAGCTCCACACGGCCTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000535933.5
ENST00000540946.5
ENST00000581396.5
CDS-3UTR CAA 90 bp AGGCCGTGTGGAGCTGGGGATGTAGGAGTGGCCAGTGCCCGGTGTCCACGGGGTTCCATTACTGGCATTTaGAACGGATCGGCCAGACCT +
Preference number: 5 (lower is better)
Translates to: RPCGAGDVGVASARCPRGSITGI*NGSARP
Trigger: AGGTCTGGCCGATCCGTTCAAAATGCCAGTAATGGA...ACCCCGTGGACACCGGGCACTGGCCACTCCTACATCCCCAGCTCCACACGGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000535933.5
ENST00000540946.5
ENST00000581396.5
CDS-3UTR CAA 90 bp CTGGGCTGGCAGCTGAATGATGGAGAGAGGGTCAAGAAGGTGAGAGACCCCCACCTGTGTTCCCCACCATaGGGCTCACCACGGCTGGAG +
Preference number: 5 (lower is better)
Translates to: LGWQLNDGERVKKVRDPHLCSPP*GSPRLE
Trigger: CTCCAGCCGTGGTGAGCCCAATGGTGGGGAACACAG...GTGGGGGTCTCTCACCTTCTTGACCCTCTCTCCATCATTCAGCTGCCAGCCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000478943.5
ENST00000581396.5
CDS-3UTR CAA 90 bp ACAGGGCGGGGCCGGGCGTGCTCTTTCTCCATGGGCGGGTGGAGGAAAGACAGTGGGAGAGAGTATAAATaGGTGGCCAGAGGACCTCTG +
Preference number: 5 (lower is better)
Translates to: TGRGRACSFSMGGWRKDSGREYK*VARGPL
Trigger: CAGAGGTCCTCTGGCCACCAATTTATACTCTCTCCC...ACTGTCTTTCCTCCACCCGCCCATGGAGAAAGAGCACGCCCGGCCCCGCCCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR CAA 90 bp CCTGGGAGCAGACACGGTGGCATTTCCATGGAAACACAGGTGTGCAGGCCGTGTTCGGTGACCTCCTCATaGGACACGCGGGAGATGAGC +
Preference number: 5 (lower is better)
Translates to: PGSRHGGISMETQVCRPCSVTSS*DTREMS
Trigger: GCTCATCTCCCGCGTGTCCAATGAGGAGGTCACCGA...ACACGGCCTGCACACCTGTGTTTCCATGGAAATGCCACCGTGTCTGCTCCCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000535933.5
ENST00000540946.5
ENST00000581396.5
CDS-3UTR CAA 90 bp CAGGTGTGCAGGCCGTGTGGAGCTGGGGATGTAGGAGTGGCCAGTGCCCGGTGTCGAAGGAAGACGTTGTaGAGGTCATCGTTCACATGC +
Preference number: 5 (lower is better)
Translates to: QVCRPCGAGDVGVASARCRRKTL*RSSFTC
Trigger: GCATGTGAACGATGACCTCAACAACGTCTTCCTTCG...ACACCGGGCACTGGCCACTCCTACATCCCCAGCTCCACACGGCCTGCACACCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000535933.5
ENST00000540946.5
ENST00000581396.5
CDS-3UTR CAA 90 bp CAGGTGTGCAGGCCGTGTGGAGCTGGGGATGTAGGAGTGGCCAGTGCCCGGTGTTCCATTACTGGCATTTaGAACGGATCGGCCAGACCT +
Preference number: 5 (lower is better)
Translates to: QVCRPCGAGDVGVASARCSITGI*NGSARP
Trigger: AGGTCTGGCCGATCCGTTCAAAATGCCAGTAATGGA...ACACCGGGCACTGGCCACTCCTACATCCCCAGCTCCACACGGCCTGCACACCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000535933.5
ENST00000540946.5
ENST00000581396.5
CDS-3UTR CAA 90 bp GAAAAGAAGTGGCTGAAGCTGGTCCTGACTAGTGGGAGGCCTGGGAGCAGACACCTGTGTTCCCCACCATaGGGCTCACCACGGCTGGAG +
Preference number: 5 (lower is better)
Translates to: EKKWLKLVLTSGRPGSRHLCSPP*GSPRLE
Trigger: CTCCAGCCGTGGTGAGCCCAATGGTGGGGAACACAG...GTGTCTGCTCCCAGGCCTCCCACTAGTCAGGACCAGCTTCAGCCACTTCTTTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000535933.5
ENST00000581396.5
CDS-3UTR CAA 90 bp GGGGCCGGGCGTGCTCTTTCTCCATGGGCGGGTGGAGGAAAGACAGTCCGGGTGGCCTTCAGGATCAGCTaGGGGAGAGAGTATAAATTG +
Preference number: 5 (lower is better)
Translates to: GAGRALSPWAGGGKTVRVAFRIS*GREYKL
Trigger: CAATTTATACTCTCTCCCCAAGCTGATCCTGAAGGC...CACCCGGACTGTCTTTCCTCCACCCGCCCATGGAGAAAGAGCACGCCCGGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR CAA 90 bp CAGGTGTGCAGGCCGTGTGGAGCTGGGGATGTAGGAGTGGCCAGTGCCCGGTGTAACGGGGATCATTCCTaGGGTTATAAGCCAGCTGTC +
Preference number: 5 (lower is better)
Translates to: QVCRPCGAGDVGVASARCNGDHS*GYKPAV
Trigger: GACAGCTGGCTTATAACCCAAGGAATGATCCCCGTT...ACACCGGGCACTGGCCACTCCTACATCCCCAGCTCCACACGGCCTGCACACCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535933.5
CDS CCA 90 bp GCGAGGAATAGGAACCAGCACTTGTCCTCTGCTGTGATTGGGACCTaGGCATGGTCGCAGCTGGATCCACTTCAGGGACACTCCGCTGTG +
Preference number: 5 (lower is better)
Translates to: ARNRNQHLSSAVIGT*AWSQLDPLQGHSAV
Trigger: CACAGCGGAGTGTCCCTGAAGTGGATCCAGCTGCGACCATGCCCAGGTCCCAATCACAGCAGAGGACAAGTGCTGGTTCCTATTCCTCGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379504.8
ENST00000537091.2
ENST00000581396.5
CDS-3UTR CAA 90 bp CTAGTGGGAGGCCTGGGAGCAGACACGGTGGCATTTCCATGGAAACACAGGTGTGCAGGGAGCCATCTGTaGCCTTTTCGAGGCACTGCC +
Preference number: 5 (lower is better)
Translates to: LVGGLGADTVAFPWKHRCAGSHL*PFRGTA
Trigger: GGCAGTGCCTCGAAAAGGCAACAGATGGCTCCCTGC...ACACCTGTGTTTCCATGGAAATGCCACCGTGTCTGCTCCCAGGCCTCCCACTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000535933.5
ENST00000540946.5
ENST00000581396.5
CDS-3UTR CAA 90 bp GGTGGCATTTCCATGGAAACACAGGTGTGCAGGCCGTGTGGAGCTGGGGATGTAGCAGGGAGCCATCTGTaGCCTTTTCGAGGCACTGCC +
Preference number: 5 (lower is better)
Translates to: GGISMETQVCRPCGAGDVAGSHL*PFRGTA
Trigger: GGCAGTGCCTCGAAAAGGCAACAGATGGCTCCCTGC...TACATCCCCAGCTCCACACGGCCTGCACACCTGTGTTTCCATGGAAATGCCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000535933.5
ENST00000540946.5
ENST00000581396.5
CDS-3UTR CAA 90 bp GTGTGCAGGCCGTGTGGAGCTGGGGATGTAGGAGTGGCCAGTGCCCGGTGTCCAATCAGAGCAAGCACTTaGTCCTGTACAATGGTGGGA +
Preference number: 5 (lower is better)
Translates to: VCRPCGAGDVGVASARCPIRAST*SCTMVG
Trigger: TCCCACCATTGTACAGGACAAAGTGCTTGCTCTGAT...TGGACACCGGGCACTGGCCACTCCTACATCCCCAGCTCCACACGGCCTGCACAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000535933.5
ENST00000540946.5
CDS-3UTR CAA 90 bp CAGGTGTGCAGGCCGTGTGGAGCTGGGGATGTAGGAGTGGCCAGTGCCCGGTGTATCAGAGCAAGCACTTaGTCCTGTACAATGGTGGGA +
Preference number: 5 (lower is better)
Translates to: QVCRPCGAGDVGVASARCIRAST*SCTMVG
Trigger: TCCCACCATTGTACAGGACAAAGTGCTTGCTCTGAT...ACACCGGGCACTGGCCACTCCTACATCCCCAGCTCCACACGGCCTGCACACCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000535933.5
ENST00000540946.5
CDS-3UTR CAA 90 bp CTCAGAGAAAAGAAGTGGCTGAAGCTGGTCCTGACTAGTGGGAGGCCTGGGAGCTCGGTGACCTCCTCATaGGACACGCGGGAGATGAGC +
Preference number: 5 (lower is better)
Translates to: LREKKWLKLVLTSGRPGSSVTSS*DTREMS
Trigger: GCTCATCTCCCGCGTGTCCAATGAGGAGGTCACCGA...GCTCCCAGGCCTCCCACTAGTCAGGACCAGCTTCAGCCACTTCTTTTCTCTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000535933.5
ENST00000581396.5
CDS-3UTR CAA 90 bp GGTGGCATTTCCATGGAAACACAGGTGTGCAGGCCGTGTGGAGCTGGGGATGTATCGGTGACCTCCTCATaGGACACGCGGGAGATGAGC +
Preference number: 5 (lower is better)
Translates to: GGISMETQVCRPCGAGDVSVTSS*DTREMS
Trigger: GCTCATCTCCCGCGTGTCCAATGAGGAGGTCACCGA...TACATCCCCAGCTCCACACGGCCTGCACACCTGTGTTTCCATGGAAATGCCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000535933.5
ENST00000540946.5
ENST00000581396.5
CDS-3UTR CAA 90 bp AGGCCGTGTGGAGCTGGGGATGTAGGAGTGGCCAGTGCCCGGTGTCCACGGGGTTATCGAAGGAAGACGTaGTTGAGGTCATCGTTCACA +
Preference number: 5 (lower is better)
Translates to: RPCGAGDVGVASARCPRGYRRKT*LRSSFT
Trigger: TGTGAACGATGACCTCAACAACGTCTTCCTTCGATA...ACCCCGTGGACACCGGGCACTGGCCACTCCTACATCCCCAGCTCCACACGGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000535933.5
ENST00000540946.5
ENST00000581396.5
CDS-3UTR CAA 90 bp TGGCAGGGCCTCAGAGACAACCCAAGTCACAACCCAAAGGCAGCCAAAGGGCTGGCCAGCAACAACCCCTaGAGGCTCCAAAGCTCCTTG +
Preference number: 5 (lower is better)
Translates to: WQGLRDNPSHNPKAAKGLASNNP*RLQSSL
Trigger: CAAGGAGCTTTGGAGCCTCAAGGGGTTGTTGCTGGC...CAGCCCTTTGGCTGCCTTTGGGTTGTGACTTGGGTTGTCTCTGAGGCCCTGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR CAA 90 bp TGCAGGCCGTGTGGAGCTGGGGATGTAGGAGTGGCCAGTGCCCGGTGTCCACGGACAATGGTGGGAGGGTaGTTCTTGGGAGATATAATT +
Preference number: 5 (lower is better)
Translates to: CRPCGAGDVGVASARCPRTMVGG*FLGDII
Trigger: AATTATATCTCCCAAGAACAACCCTCCCACCATTGT...CCGTGGACACCGGGCACTGGCCACTCCTACATCCCCAGCTCCACACGGCCTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000535933.5
ENST00000540946.5
CDS-3UTR CAA 90 bp GTGTGGAGCTGGGGATGTAGGAGTGGCCAGTGCCCGGTGTCCACGGGGTGCGAGCCCAGGTCTATTAAGTaGTCTTCGGTTACTTCATTC +
Preference number: 5 (lower is better)
Translates to: VWSWGCRSGQCPVSTGCEPRSIK*SSVTSF
Trigger: GAATGAAGTAACCGAAGACAACTTAATAGACCTGGG...CTCGCACCCCGTGGACACCGGGCACTGGCCACTCCTACATCCCCAGCTCCACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000535933.5
ENST00000540946.5
ENST00000581396.5
CDS-3UTR CAA 90 bp GTGCAGGCCGTGTGGAGCTGGGGATGTAGGAGTGGCCAGTGCCCGGTGTCCACGGAACTCTGTTTTCGATaGTCTAGTGCAGAAGCAAGT +
Preference number: 5 (lower is better)
Translates to: VQAVWSWGCRSGQCPVSTELCFR*SSAEAS
Trigger: ACTTGCTTCTGCACTAGACAATCGAAAACAGAGTTC...CGTGGACACCGGGCACTGGCCACTCCTACATCCCCAGCTCCACACGGCCTGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000535933.5
ENST00000540946.5
ENST00000581396.5
CDS-3UTR CAA 90 bp AGGCCGTGTGGAGCTGGGGATGTAGGAGTGGCCAGTGCCCGGTGTCCACGGGGTGAACTCTGTTTTCGATaGTCTAGTGCAGAAGCAAGT +
Preference number: 5 (lower is better)
Translates to: RPCGAGDVGVASARCPRGELCFR*SSAEAS
Trigger: ACTTGCTTCTGCACTAGACAATCGAAAACAGAGTTC...ACCCCGTGGACACCGGGCACTGGCCACTCCTACATCCCCAGCTCCACACGGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000535933.5
ENST00000540946.5
ENST00000581396.5
CDS-3UTR CAA 90 bp CTGGGAGCAGACACGGTGGCATTTCCATGGAAACACAGGTGTGCAGGCCGTGTGGTTTGCTGCTGGCTCTaGAGGCAGATGTGTGAGGCT +
Preference number: 5 (lower is better)
Translates to: LGADTVAFPWKHRCAGRVVCCWL*RQMCEA
Trigger: AGCCTCACACATCTGCCTCAAGAGCCAGCAGCAAAC...CACACGGCCTGCACACCTGTGTTTCCATGGAAATGCCACCGTGTCTGCTCCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR CAA 90 bp GGCCTGGGAGCAGACACGGTGGCATTTCCATGGAAACACAGGTGTGCAGGCCGTTGGGTCGGGCAGCACTaGCTCTTCACTGGAATAGTT +
Preference number: 5 (lower is better)
Translates to: GLGADTVAFPWKHRCAGRWVGQH*LFTGIV
Trigger: AACTATTCCAGTGAAGAGCAAGTGCTGCCCGACCCA...ACGGCCTGCACACCTGTGTTTCCATGGAAATGCCACCGTGTCTGCTCCCAGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR CAA 90 bp CTAGTGGGAGGCCTGGGAGCAGACACGGTGGCATTTCCATGGAAACACAGGTGTCAGGGGAAGCCTGACTaGGACCCCACAGATAGGAAG +
Preference number: 5 (lower is better)
Translates to: LVGGLGADTVAFPWKHRCQGKPD*DPTDRK
Trigger: CTTCCTATCTGTGGGGTCCAAGTCAGGCTTCCCCTG...ACACCTGTGTTTCCATGGAAATGCCACCGTGTCTGCTCCCAGGCCTCCCACTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR CAA 90 bp CAACTCCCTGAATTCCAGATGGCTCATCCTAGCCAGAGCTGCTATCAGAGGAGCGCAGGGTGGTGTGTCTaGCGCTGCTCAGCCAAGGAG +
Preference number: 5 (lower is better)
Translates to: QLPEFQMAHPSQSCYQRSAGWCV*RCSAKE
Trigger: CTCCTTGGCTGAGCAGCGCAAGACACACCACCCTGC...GCTCCTCTGATAGCAGCTCTGGCTAGGATGAGCCATCTGGAATTCAGGGAGTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468944.1
CDS GCA 90 bp CCTCTCGTCTGGGCAAACATGTCAAAGCCGTCACGGGGATTACATTaGTGGAGTGAACTGAGGGTGCCACTGACGCTCTCTGTCCCCAAG +
Preference number: 5 (lower is better)
Translates to: PLVWANMSKPSRGLH*WSELRVPLTLSVPK
Trigger: CTTGGGGACAGAGAGCGTCAGTGGCACCCTCAGTTCACTCCAGCAATGTAATCCCCGTGACGGCTTTGACATGTTTGCCCAGACGAGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000535933.5
ENST00000540946.5
ENST00000542206.5
ENST00000581396.5
CDS CCA 90 bp AATAGGAACCAGCACTTGTCCTCTGCTGTGATTGGGACCTGGGCATaGTCGCAGCTGGATCCACTTCAGGGACACTCCGCTGTGGTGTGT +
Preference number: 5 (lower is better)
Translates to: NRNQHLSSAVIGTWA*SQLDPLQGHSAVVC
Trigger: ACACACCACAGCGGAGTGTCCCTGAAGTGGATCCAGCTGCGACCATGCCCAGGTCCCAATCACAGCAGAGGACAAGTGCTGGTTCCTATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379504.8
ENST00000537091.2
ENST00000581396.5
CDS-3UTR CAA 90 bp TGGCAGTTTGGTTTATTGGTAGTGTCGTCTCAGCAGCGTGCCACATGGCCACCAGCAGGGAGCCATCTGTaGCCTTTTCGAGGCACTGCC +
Preference number: 5 (lower is better)
Translates to: WQFGLLVVSSQQRATWPPAGSHL*PFRGTA
Trigger: GGCAGTGCCTCGAAAAGGCAACAGATGGCTCCCTGC...TGGTGGCCATGTGGCACGCTGCTGAGACGACACTACCAATAAACCAAACTGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000581396.5
CDS-3UTR CAA 90 bp CTCAGAGAAAAGAAGTGGCTGAAGCTGGTCCTGACTAGTGGGAGGCCTGGGAGCCTCGAATGGCATCCTTaGGCCCTTCCTCCGTCTCAT +
Preference number: 5 (lower is better)
Translates to: LREKKWLKLVLTSGRPGSLEWHP*ALPPSH
Trigger: ATGAGACGGAGGAAGGGCCAAAGGATGCCATTCGAG...GCTCCCAGGCCTCCCACTAGTCAGGACCAGCTTCAGCCACTTCTTTTCTCTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000535933.5
ENST00000581396.5
CDS-3UTR CAA 90 bp AGCAGACACGGTGGCATTTCCATGGAAACACAGGTGTGCAGGCCGTGTGGAGCTCTCGAATGGCATCCTTaGGCCCTTCCTCCGTCTCAT +
Preference number: 5 (lower is better)
Translates to: SRHGGISMETQVCRPCGALEWHP*ALPPSH
Trigger: ATGAGACGGAGGAAGGGCCAAAGGATGCCATTCGAG...AGCTCCACACGGCCTGCACACCTGTGTTTCCATGGAAATGCCACCGTGTCTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000535933.5
ENST00000540946.5
ENST00000581396.5
CDS-3UTR CAA 90 bp CTAGTGGGAGGCCTGGGAGCAGACACGGTGGCATTTCCATGGAAACACAGGTGTCTCGAATGGCATCCTTaGGCCCTTCCTCCGTCTCAT +
Preference number: 5 (lower is better)
Translates to: LVGGLGADTVAFPWKHRCLEWHP*ALPPSH
Trigger: ATGAGACGGAGGAAGGGCCAAAGGATGCCATTCGAG...ACACCTGTGTTTCCATGGAAATGCCACCGTGTCTGCTCCCAGGCCTCCCACTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000535933.5
ENST00000540946.5
ENST00000581396.5
CDS-3UTR CAA 90 bp GTGCAGGCCGTGTGGAGCTGGGGATGTAGGAGTGGCCAGTGCCCGGTGTCCACGTTGGGAGATATAATTTaGACCAGAACACTGTCGATG +
Preference number: 5 (lower is better)
Translates to: VQAVWSWGCRSGQCPVSTLGDII*TRTLSM
Trigger: CATCGACAGTGTTCTGGTCAAAATTATATCTCCCAA...CGTGGACACCGGGCACTGGCCACTCCTACATCCCCAGCTCCACACGGCCTGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000535933.5
ENST00000540946.5
CDS-3UTR CAA 90 bp AGGCCTGGGAGCAGACACGGTGGCATTTCCATGGAAACACAGGTGTGCAGGCCGCGAAGGAAGACGTTGTaGAGGTCATCGTTCACATGC +
Preference number: 5 (lower is better)
Translates to: RPGSRHGGISMETQVCRPRRKTL*RSSFTC
Trigger: GCATGTGAACGATGACCTCAACAACGTCTTCCTTCG...CGGCCTGCACACCTGTGTTTCCATGGAAATGCCACCGTGTCTGCTCCCAGGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000535933.5
ENST00000540946.5
ENST00000581396.5
CDS-3UTR CAA 90 bp GTGTGCAGGCCGTGTGGAGCTGGGGATGTAGGAGTGGCCAGTGCCCGGTGTCCACCCAGGTCTATTAAGTaGTCTTCGGTTACTTCATTC +
Preference number: 5 (lower is better)
Translates to: VCRPCGAGDVGVASARCPPRSIK*SSVTSF
Trigger: GAATGAAGTAACCGAAGACAACTTAATAGACCTGGG...TGGACACCGGGCACTGGCCACTCCTACATCCCCAGCTCCACACGGCCTGCACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000535933.5
ENST00000540946.5
ENST00000581396.5
CDS-3UTR CAA 90 bp CTGGGAGCAGACACGGTGGCATTTCCATGGAAACACAGGTGTGCAGGCCGTGTGAGTCTCTGGCTGCAGTaGTCCCACCACTCAGAGAAA +
Preference number: 5 (lower is better)
Translates to: LGADTVAFPWKHRCAGRVSLWLQ*SHHSEK
Trigger: TTTCTCTGAGTGGTGGGACAACTGCAGCCAGAGACT...CACACGGCCTGCACACCTGTGTTTCCATGGAAATGCCACCGTGTCTGCTCCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000581396.5
CDS-3UTR CAA 90 bp AGCCTGGGCTGGCAGCTGAATGATGGAGAGAGGGTCAAGAAGGTGAGAGACCCCAGTCTCTGGCTGCAGTaGTCCCACCACTCAGAGAAA +
Preference number: 5 (lower is better)
Translates to: SLGWQLNDGERVKKVRDPSLWLQ*SHHSEK
Trigger: TTTCTCTGAGTGGTGGGACAACTGCAGCCAGAGACT...GGGGTCTCTCACCTTCTTGACCCTCTCTCCATCATTCAGCTGCCAGCCCAGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000478943.5
ENST00000581396.5
CDS-3UTR CAA 90 bp AGAGGGTATCTGGAAGGAGGGCCAGTGGGGTGGATGGATGCTCTGAGCCTCGGGGCCTTCAGGATCAGCTaGGGGAGAGAGTATAAATTG +
Preference number: 5 (lower is better)
Translates to: RGYLEGGPVGWMDALSLGAFRIS*GREYKL
Trigger: CAATTTATACTCTCTCCCCAAGCTGATCCTGAAGGC...CCCGAGGCTCAGAGCATCCATCCACCCCACTGGCCCTCCTTCCAGATACCCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR CAA 90 bp CAGTTTGGTTTATTGGTAGTGTCGTCTCAGCAGCGTGCCACATGGCCACCATCTGATGACCCGAGTCCCTaGCCCATGGCCAGGAGACAC +
Preference number: 5 (lower is better)
Translates to: QFGLLVVSSQQRATWPPSDDPSP*PMARRH
Trigger: GTGTCTCCTGGCCATGGGCAAGGGACTCGGGTCATC...AGATGGTGGCCATGTGGCACGCTGCTGAGACGACACTACCAATAAACCAAACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR CAA 90 bp AGACACGGTGGCATTTCCATGGAAACACAGGTGTGCAGGCCGTGTGGAGCTGGGTGGGTCGGGCAGCACTaGCTCTTCACTGGAATAGTT +
Preference number: 5 (lower is better)
Translates to: RHGGISMETQVCRPCGAGWVGQH*LFTGIV
Trigger: AACTATTCCAGTGAAGAGCAAGTGCTGCCCGACCCA...CCCAGCTCCACACGGCCTGCACACCTGTGTTTCCATGGAAATGCCACCGTGTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR CAA 90 bp TGGCAGTTTGGTTTATTGGTAGTGTCGTCTCAGCAGCGTGCCACATGGCCACCAGCACCGGGGCTATACTaGCTTCCTGTGCAGGCCTCA +
Preference number: 5 (lower is better)
Translates to: WQFGLLVVSSQQRATWPPAPGLY*LPVQAS
Trigger: TGAGGCCTGCACAGGAAGCAAGTATAGCCCCGGTGC...TGGTGGCCATGTGGCACGCTGCTGAGACGACACTACCAATAAACCAAACTGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS TCA 90 bp GCACTGTTAATGCCAGCATCACCTCTCTGTAGTTCCGGTTCCCGTTaGGCCGCTTCTTCAGGGCTCGAATGGCATCCTTTGGCCCTTCCT +
Preference number: 5 (lower is better)
Translates to: ALLMPASPLCSSGSR*AASSGLEWHPLALP
Trigger: AGGAAGGGCCAAAGGATGCCATTCGAGCCCTGAAGAAGCGGCTCAACGGGAACCGGAACTACAGAGAGGTGATGCTGGCATTAACAGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000535933.5
ENST00000540946.5
ENST00000579586.1
CDS CCA 90 bp CTCGTCTGGGCAAACATGTCAAAGCCGTCACGGGGATTACATTGCTaGAGTGAACTGAGGGTGCCACTGACGCTCTCTGTCCCCAAGTCT +
Preference number: 5 (lower is better)
Translates to: LVWANMSKPSRGLHC*SELRVPLTLSVPKS
Trigger: AGACTTGGGGACAGAGAGCGTCAGTGGCACCCTCAGTTCACTCCAGCAATGTAATCCCCGTGACGGCTTTGACATGTTTGCCCAGACGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000535933.5
ENST00000540946.5
ENST00000542206.5
ENST00000581396.5
CDS-3UTR CAA 90 bp GAAACACAGGTGTGCAGGCCGTGTGGAGCTGGGGATGTAGGAGTGGCCAGTGCCGTGGGAGGGTTGTTCTaGGGAGATATAATTTTGACC +
Preference number: 5 (lower is better)
Translates to: ETQVCRPCGAGDVGVASAVGGLF*GDIILT
Trigger: GGTCAAAATTATATCTCCCAAGAACAACCCTCCCAC...GGCACTGGCCACTCCTACATCCCCAGCTCCACACGGCCTGCACACCTGTGTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000535933.5
ENST00000540946.5
CDS-3UTR CAA 90 bp CTGAATGCTCCCCAACGACCATGTCGCTGGTCTCTTCTCCCGTCAAGCCCAGCCATCAGAGCAAGCACTTaGTCCTGTACAATGGTGGGA +
Preference number: 5 (lower is better)
Translates to: LNAPQRPCRWSLLPSSPAIRAST*SCTMVG
Trigger: TCCCACCATTGTACAGGACAAAGTGCTTGCTCTGAT...GGCTGGGCTTGACGGGAGAAGAGACCAGCGACATGGTCGTTGGGGAGCATTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379504.8
CDS-3UTR CAA 90 bp CATGGAAACACAGGTGTGCAGGCCGTGTGGAGCTGGGGATGTAGGAGTGGCCAGATCAGAGCAAGCACTTaGTCCTGTACAATGGTGGGA +
Preference number: 5 (lower is better)
Translates to: HGNTGVQAVWSWGCRSGQIRAST*SCTMVG
Trigger: TCCCACCATTGTACAGGACAAAGTGCTTGCTCTGAT...CTGGCCACTCCTACATCCCCAGCTCCACACGGCCTGCACACCTGTGTTTCCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000535933.5
ENST00000540946.5
CDS-3UTR CAA 90 bp AGACACGGTGGCATTTCCATGGAAACACAGGTGTGCAGGCCGTGTGGAGCTGGGAATAGGAACCAGCACTaGTCCTCTGCTGTGATTGGG +
Preference number: 5 (lower is better)
Translates to: RHGGISMETQVCRPCGAGNRNQH*SSAVIG
Trigger: CCCAATCACAGCAGAGGACAAGTGCTGGTTCCTATT...CCCAGCTCCACACGGCCTGCACACCTGTGTTTCCATGGAAATGCCACCGTGTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000581396.5
CDS-3UTR CAA 90 bp CTGGGAGCAGACACGGTGGCATTTCCATGGAAACACAGGTGTGCAGGCCGTGTGCGAAGGAAGACGTTGTaGAGGTCATCGTTCACATGC +
Preference number: 5 (lower is better)
Translates to: LGADTVAFPWKHRCAGRVRRKTL*RSSFTC
Trigger: GCATGTGAACGATGACCTCAACAACGTCTTCCTTCG...CACACGGCCTGCACACCTGTGTTTCCATGGAAATGCCACCGTGTCTGCTCCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000535933.5
ENST00000540946.5
ENST00000581396.5
CDS-3UTR CAA 90 bp TGGGAGCAGACACGGTGGCATTTCCATGGAAACACAGGTGTGCAGGCCGTGTGGCGAAGGAAGACGTTGTaGAGGTCATCGTTCACATGC +
Preference number: 5 (lower is better)
Translates to: WEQTRWHFHGNTGVQAVWRRKTL*RSSFTC
Trigger: GCATGTGAACGATGACCTCAACAACGTCTTCCTTCG...CCACACGGCCTGCACACCTGTGTTTCCATGGAAATGCCACCGTGTCTGCTCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000535933.5
ENST00000540946.5
ENST00000581396.5
CDS-3UTR CAA 90 bp CCCAGGAGGGCAGAATGCCTGAGAAGGTCGCTGAGCCAGGCAGAGGTGAGCACATATCGAAGGAAGACGTaGTTGAGGTCATCGTTCACA +
Preference number: 5 (lower is better)
Translates to: PRRAECLRRSLSQAEVSTYRRKT*LRSSFT
Trigger: TGTGAACGATGACCTCAACAACGTCTTCCTTCGATA...TGTGCTCACCTCTGCCTGGCTCAGCGACCTTCTCAGGCATTCTGCCCTCCTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000478943.5
ENST00000581396.5
CDS-3UTR CAA 90 bp GCCATCCTGAATGCTCCCCAACGACCATGTCGCTGGTCTCTTCTCCCGTCAAGCTCCATTACTGGCATTTaGAACGGATCGGCCAGACCT +
Preference number: 5 (lower is better)
Translates to: AILNAPQRPCRWSLLPSSSITGI*NGSARP
Trigger: AGGTCTGGCCGATCCGTTCAAAATGCCAGTAATGGA...GCTTGACGGGAGAAGAGACCAGCGACATGGTCGTTGGGGAGCATTCAGGATGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR CAA 90 bp AACACAGGTGTGCAGGCCGTGTGGAGCTGGGGATGTAGGAGTGGCCAGTGCCCGCCCAGGTCTATTAAGTaGTCTTCGGTTACTTCATTC +
Preference number: 5 (lower is better)
Translates to: NTGVQAVWSWGCRSGQCPPRSIK*SSVTSF
Trigger: GAATGAAGTAACCGAAGACAACTTAATAGACCTGGG...CGGGCACTGGCCACTCCTACATCCCCAGCTCCACACGGCCTGCACACCTGTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000535933.5
ENST00000540946.5
ENST00000581396.5
CDS-3UTR CAA 90 bp CTCAGAGAAAAGAAGTGGCTGAAGCTGGTCCTGACTAGTGGGAGGCCTGGGAGCAGTCTCTGGCTGCAGTaGTCCCACCACTCAGAGAAA +
Preference number: 5 (lower is better)
Translates to: LREKKWLKLVLTSGRPGSSLWLQ*SHHSEK
Trigger: TTTCTCTGAGTGGTGGGACAACTGCAGCCAGAGACT...GCTCCCAGGCCTCCCACTAGTCAGGACCAGCTTCAGCCACTTCTTTTCTCTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000581396.5
CDS-3UTR CAA 90 bp GTAACCCAAGTGGGTGAGACGTCCCCAAAGCCGACAGTGCAGAAGCTCCCAGGGTGGCAGTTTGGTTTATaGGTAGTGTCGTCTCAGCAG +
Preference number: 5 (lower is better)
Translates to: VTQVGETSPKPTVQKLPGWQFGL*VVSSQQ
Trigger: CTGCTGAGACGACACTACCAATAAACCAAACTGCCA...CCCTGGGAGCTTCTGCACTGTCGGCTTTGGGGACGTCTCACCCACTTGGGTTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR CAA 90 bp CTCAGAGAAAAGAAGTGGCTGAAGCTGGTCCTGACTAGTGGGAGGCCTGGGAGCGGGAGAGAGTATAAATaGGTGGCCAGAGGACCTCTG +
Preference number: 5 (lower is better)
Translates to: LREKKWLKLVLTSGRPGSGREYK*VARGPL
Trigger: CAGAGGTCCTCTGGCCACCAATTTATACTCTCTCCC...GCTCCCAGGCCTCCCACTAGTCAGGACCAGCTTCAGCCACTTCTTTTCTCTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR CAA 90 bp CATGGAAACACAGGTGTGCAGGCCGTGTGGAGCTGGGGATGTAGGAGTGGCCAGTTGTGGTCTCTCTTTTaGTGGCCAACTCTCCTCTGT +
Preference number: 5 (lower is better)
Translates to: HGNTGVQAVWSWGCRSGQLWSLF*WPTLLC
Trigger: ACAGAGGAGAGTTGGCCACAAAAAGAGAGACCACAA...CTGGCCACTCCTACATCCCCAGCTCCACACGGCCTGCACACCTGTGTTTCCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478943.5
CDS-3UTR CAA 90 bp ATGGAAACACAGGTGTGCAGGCCGTGTGGAGCTGGGGATGTAGGAGTGGCCAGTACCGTTCTCCATCACTaGGTACAGACTGCCTCATTC +
Preference number: 5 (lower is better)
Translates to: METQVCRPCGAGDVGVASTVLHH*VQTASF
Trigger: GAATGAGGCAGTCTGTACCAAGTGATGGAGAACGGT...ACTGGCCACTCCTACATCCCCAGCTCCACACGGCCTGCACACCTGTGTTTCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478943.5
CDS TCA 90 bp ATGCTGTTAATGCCAGCATCACCTCTCTGTAGTTCCGGTTCCCGTTaGGCCGCTTCTTCAGGGCTCGAATGGCATCCTTTGGCCCTTCCT +
Preference number: 5 (lower is better)
Translates to: MLLMPASPLCSSGSR*AASSGLEWHPLALP
Trigger: AGGAAGGGCCAAAGGATGCCATTCGAGCCCTGAAGAAGCGGCTCAACGGGAACCGGAACTACAGAGAGGTGATGCTGGCATTAACAGCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537091.2
ENST00000581396.5
CDS-3UTR CAA 90 bp GTTTGGTTTATTGGTAGTGTCGTCTCAGCAGCGTGCCACATGGCCACCATCTGCCTCGAATGGCATCCTTaGGCCCTTCCTCCGTCTCAT +
Preference number: 5 (lower is better)
Translates to: VWFIGSVVSAACHMATICLEWHP*ALPPSH
Trigger: ATGAGACGGAGGAAGGGCCAAAGGATGCCATTCGAG...GCAGATGGTGGCCATGTGGCACGCTGCTGAGACGACACTACCAATAAACCAAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000581396.5
CDS-3UTR CAA 90 bp TGGCATTTCCATGGAAACACAGGTGTGCAGGCCGTGTGGAGCTGGGGATGTAGGTCGATGAAATCTCGGTaGGCCACAAGGATGTGGAAG +
Preference number: 5 (lower is better)
Translates to: WHFHGNTGVQAVWSWGCRSMKSR*ATRMWK
Trigger: CTTCCACATCCTTGTGGCCAACCGAGATTTCATCGA...CCTACATCCCCAGCTCCACACGGCCTGCACACCTGTGTTTCCATGGAAATGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000535933.5
ENST00000540946.5
CDS-3UTR CAA 90 bp GGCCTGGGAGCAGACACGGTGGCATTTCCATGGAAACACAGGTGTGCAGGCCGTGTGGGAGGGTTGTTCTaGGGAGATATAATTTTGACC +
Preference number: 5 (lower is better)
Translates to: GLGADTVAFPWKHRCAGRVGGLF*GDIILT
Trigger: GGTCAAAATTATATCTCCCAAGAACAACCCTCCCAC...ACGGCCTGCACACCTGTGTTTCCATGGAAATGCCACCGTGTCTGCTCCCAGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000535933.5
ENST00000540946.5
CDS-3UTR CAA 90 bp AGCCTGGGCTGGCAGCTGAATGATGGAGAGAGGGTCAAGAAGGTGAGAGACCCCATCAGAGCAAGCACTTaGTCCTGTACAATGGTGGGA +
Preference number: 5 (lower is better)
Translates to: SLGWQLNDGERVKKVRDPIRAST*SCTMVG
Trigger: TCCCACCATTGTACAGGACAAAGTGCTTGCTCTGAT...GGGGTCTCTCACCTTCTTGACCCTCTCTCCATCATTCAGCTGCCAGCCCAGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318094.14
ENST00000379504.8
CDS-3UTR CAA 90 bp GGCATTTCCATGGAAACACAGGTGTGCAGGCCGTGTGGAGCTGGGGATGTAGGAAATAGGAACCAGCACTaGTCCTCTGCTGTGATTGGG +
Preference number: 5 (lower is better)
Translates to: GISMETQVCRPCGAGDVGNRNQH*SSAVIG
Trigger: CCCAATCACAGCAGAGGACAAGTGCTGGTTCCTATT...TCCTACATCCCCAGCTCCACACGGCCTGCACACCTGTGTTTCCATGGAAATGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000581396.5
CDS-3UTR CAA 90 bp GGTGGCATTTCCATGGAAACACAGGTGTGCAGGCCGTGTGGAGCTGGGGATGTACGAAGGAAGACGTTGTaGAGGTCATCGTTCACATGC +
Preference number: 5 (lower is better)
Translates to: GGISMETQVCRPCGAGDVRRKTL*RSSFTC
Trigger: GCATGTGAACGATGACCTCAACAACGTCTTCCTTCG...TACATCCCCAGCTCCACACGGCCTGCACACCTGTGTTTCCATGGAAATGCCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000535933.5
ENST00000540946.5
ENST00000581396.5
CDS-3UTR CAA 90 bp ACAAGTCCAAGGAGTGAGACCAGGCCCATGAGTGCAGCACACCCTGCTCTTCCATCCATTACTGGCATTTaGAACGGATCGGCCAGACCT +
Preference number: 5 (lower is better)
Translates to: TSPRSETRPMSAAHPALPSITGI*NGSARP
Trigger: AGGTCTGGCCGATCCGTTCAAAATGCCAGTAATGGA...TGGAAGAGCAGGGTGTGCTGCACTCATGGGCCTGGTCTCACTCCTTGGACTTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000478943.5
ENST00000581396.5
CDS-3UTR CAA 90 bp AGCAGACACGGTGGCATTTCCATGGAAACACAGGTGTGCAGGCCGTGTGGAGCTTCCATTACTGGCATTTaGAACGGATCGGCCAGACCT +
Preference number: 5 (lower is better)
Translates to: SRHGGISMETQVCRPCGASITGI*NGSARP
Trigger: AGGTCTGGCCGATCCGTTCAAAATGCCAGTAATGGA...AGCTCCACACGGCCTGCACACCTGTGTTTCCATGGAAATGCCACCGTGTCTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000535933.5
ENST00000540946.5
ENST00000581396.5
CDS-3UTR CAA 90 bp GGTGGCATTTCCATGGAAACACAGGTGTGCAGGCCGTGTGGAGCTGGGGATGTATCCATTACTGGCATTTaGAACGGATCGGCCAGACCT +
Preference number: 5 (lower is better)
Translates to: GGISMETQVCRPCGAGDVSITGI*NGSARP
Trigger: AGGTCTGGCCGATCCGTTCAAAATGCCAGTAATGGA...TACATCCCCAGCTCCACACGGCCTGCACACCTGTGTTTCCATGGAAATGCCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000535933.5
ENST00000540946.5
ENST00000581396.5
CDS-3UTR CAA 90 bp CTCTTTCTCCATGGGCGGGTGGAGGAAAGACAGTCCGGGTGGTCTGCTCAGGAATGGCAGTTTGGTTTATaGGTAGTGTCGTCTCAGCAG +
Preference number: 5 (lower is better)
Translates to: LFLHGRVEERQSGWSAQEWQFGL*VVSSQQ
Trigger: CTGCTGAGACGACACTACCAATAAACCAAACTGCCA...TTCCTGAGCAGACCACCCGGACTGTCTTTCCTCCACCCGCCCATGGAGAAAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000478943.5
ENST00000581396.5
CDS-3UTR CAA 90 bp AGCCTGGGCTGGCAGCTGAATGATGGAGAGAGGGTCAAGAAGGTGAGAGACCCCTGGCAGTTTGGTTTATaGGTAGTGTCGTCTCAGCAG +
Preference number: 5 (lower is better)
Translates to: SLGWQLNDGERVKKVRDPWQFGL*VVSSQQ
Trigger: CTGCTGAGACGACACTACCAATAAACCAAACTGCCA...GGGGTCTCTCACCTTCTTGACCCTCTCTCCATCATTCAGCTGCCAGCCCAGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000478943.5
ENST00000581396.5
CDS-3UTR CAA 90 bp GAGCCTGCAGTGTGTGCGTGGCAGTTTGGTTTATTGGTAGTGTCGTCTCAGCAGGTTTGCTGCTGGCTCTaGAGGCAGATGTGTGAGGCT +
Preference number: 5 (lower is better)
Translates to: EPAVCAWQFGLLVVSSQQVCCWL*RQMCEA
Trigger: AGCCTCACACATCTGCCTCAAGAGCCAGCAGCAAAC...CTGCTGAGACGACACTACCAATAAACCAAACTGCCACGCACACACTGCAGGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR CAA 90 bp AGAGTCTCTGGCTGCAGTTGTCCCACCACTCAGAGAAAAGAAGTGGCTGAAGCTGCCAGCAACAACCCCTaGAGGCTCCAAAGCTCCTTG +
Preference number: 5 (lower is better)
Translates to: RVSGCSCPTTQRKEVAEAASNNP*RLQSSL
Trigger: CAAGGAGCTTTGGAGCCTCAAGGGGTTGTTGCTGGC...AGCTTCAGCCACTTCTTTTCTCTGAGTGGTGGGACAACTGCAGCCAGAGACTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR CAA 90 bp CAACTCCCTGAATTCCAGATGGCTCATCCTAGCCAGAGCTGCTATCAGAGGAGCCAGCCTCAGTGGCATTaGACAGGGAAGGTGGTCTCT +
Preference number: 5 (lower is better)
Translates to: QLPEFQMAHPSQSCYQRSQPQWH*TGKVVS
Trigger: AGAGACCACCTTCCCTGTCAAATGCCACTGAGGCTG...GCTCCTCTGATAGCAGCTCTGGCTAGGATGAGCCATCTGGAATTCAGGGAGTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468944.1
CDS TCA 90 bp CAACCCCTTTCCTCTTCAGCTCCTCATATATGTGCACAACGCCGGTaGGATCAGGACTGCTTCGAAAGGCATCAGCCCATGCCTGGATCA +
Preference number: 5 (lower is better)
Translates to: QPLSSSAPHICAQRR*DQDCFERHQPMPGS
Trigger: TGATCCAGGCATGGGCTGATGCCTTTCGAAGCAGTCCTGATCTCACCGGCGTTGTGCACATATATGAGGAGCTGAAGAGGAAAGGGGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000535933.5
CDS TCA 90 bp CAATTGTTAATGCCAGCATCACCTCTCTGTAGTTCCGGTTCCCGTTaGGCCGCTTCTTCAGGGCTCGAATGGCATCCTTTGGCCCTTCCT +
Preference number: 5 (lower is better)
Translates to: QLLMPASPLCSSGSR*AASSGLEWHPLALP
Trigger: AGGAAGGGCCAAAGGATGCCATTCGAGCCCTGAAGAAGCGGCTCAACGGGAACCGGAACTACAGAGAGGTGATGCTGGCATTAACAATTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542206.5
CDS-3UTR CAA 90 bp AGAGAAAAGAAGTGGCTGAAGCTGGTCCTGACTAGTGGGAGGCCTGGGAGCAGATCGATGAAATCTCGGTaGGCCACAAGGATGTGGAAG +
Preference number: 5 (lower is better)
Translates to: REKKWLKLVLTSGRPGSRSMKSR*ATRMWK
Trigger: CTTCCACATCCTTGTGGCCAACCGAGATTTCATCGA...TCTGCTCCCAGGCCTCCCACTAGTCAGGACCAGCTTCAGCCACTTCTTTTCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000535933.5
CDS-3UTR CAA 90 bp TGTCACAAGGTGACAAGTCCAAGGAGTGAGACCAGGCCCATGAGTGCAGCACACTCGATGAAATCTCGGTaGGCCACAAGGATGTGGAAG +
Preference number: 5 (lower is better)
Translates to: CHKVTSPRSETRPMSAAHSMKSR*ATRMWK
Trigger: CTTCCACATCCTTGTGGCCAACCGAGATTTCATCGA...GTGTGCTGCACTCATGGGCCTGGTCTCACTCCTTGGACTTGTCACCTTGTGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318094.14
ENST00000379504.8
CDS-3UTR CAA 90 bp CCCAGGAGGGCAGAATGCCTGAGAAGGTCGCTGAGCCAGGCAGAGGTGAGCACATTGGGAGATATAATTTaGACCAGAACACTGTCGATG +
Preference number: 5 (lower is better)
Translates to: PRRAECLRRSLSQAEVSTLGDII*TRTLSM
Trigger: CATCGACAGTGTTCTGGTCAAAATTATATCTCCCAA...TGTGCTCACCTCTGCCTGGCTCAGCGACCTTCTCAGGCATTCTGCCCTCCTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318094.14
ENST00000379504.8
CDS-3UTR CAA 90 bp AGACACGGTGGCATTTCCATGGAAACACAGGTGTGCAGGCCGTGTGGAGCTGGGGTGGGAGGGTTGTTCTaGGGAGATATAATTTTGACC +
Preference number: 5 (lower is better)
Translates to: RHGGISMETQVCRPCGAGVGGLF*GDIILT
Trigger: GGTCAAAATTATATCTCCCAAGAACAACCCTCCCAC...CCCAGCTCCACACGGCCTGCACACCTGTGTTTCCATGGAAATGCCACCGTGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000535933.5
ENST00000540946.5
CDS-3UTR CAA 90 bp AGGCCTGGGAGCAGACACGGTGGCATTTCCATGGAAACACAGGTGTGCAGGCCGACAATGGTGGGAGGGTaGTTCTTGGGAGATATAATT +
Preference number: 5 (lower is better)
Translates to: RPGSRHGGISMETQVCRPTMVGG*FLGDII
Trigger: AATTATATCTCCCAAGAACAACCCTCCCACCATTGT...CGGCCTGCACACCTGTGTTTCCATGGAAATGCCACCGTGTCTGCTCCCAGGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000535933.5
ENST00000540946.5
CDS-3UTR CAA 90 bp GGCCTGGGAGCAGACACGGTGGCATTTCCATGGAAACACAGGTGTGCAGGCCGTACAATGGTGGGAGGGTaGTTCTTGGGAGATATAATT +
Preference number: 5 (lower is better)
Translates to: GLGADTVAFPWKHRCAGRTMVGG*FLGDII
Trigger: AATTATATCTCCCAAGAACAACCCTCCCACCATTGT...ACGGCCTGCACACCTGTGTTTCCATGGAAATGCCACCGTGTCTGCTCCCAGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000535933.5
ENST00000540946.5
CDS-3UTR CAA 90 bp AGAGAAAAGAAGTGGCTGAAGCTGGTCCTGACTAGTGGGAGGCCTGGGAGCAGAAATAGGAACCAGCACTaGTCCTCTGCTGTGATTGGG +
Preference number: 5 (lower is better)
Translates to: REKKWLKLVLTSGRPGSRNRNQH*SSAVIG
Trigger: CCCAATCACAGCAGAGGACAAGTGCTGGTTCCTATT...TCTGCTCCCAGGCCTCCCACTAGTCAGGACCAGCTTCAGCCACTTCTTTTCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000581396.5
CDS-3UTR CAA 90 bp CCTGGGAGCAGACACGGTGGCATTTCCATGGAAACACAGGTGTGCAGGCCGTGTTATCGAAGGAAGACGTaGTTGAGGTCATCGTTCACA +
Preference number: 5 (lower is better)
Translates to: PGSRHGGISMETQVCRPCYRRKT*LRSSFT
Trigger: TGTGAACGATGACCTCAACAACGTCTTCCTTCGATA...ACACGGCCTGCACACCTGTGTTTCCATGGAAATGCCACCGTGTCTGCTCCCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000535933.5
ENST00000540946.5
ENST00000581396.5
CDS-3UTR CAA 90 bp AGTGGGAGGCCTGGGAGCAGACACGGTGGCATTTCCATGGAAACACAGGTGTGCTATCGAAGGAAGACGTaGTTGAGGTCATCGTTCACA +
Preference number: 5 (lower is better)
Translates to: SGRPGSRHGGISMETQVCYRRKT*LRSSFT
Trigger: TGTGAACGATGACCTCAACAACGTCTTCCTTCGATA...GCACACCTGTGTTTCCATGGAAATGCCACCGTGTCTGCTCCCAGGCCTCCCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000535933.5
ENST00000540946.5
ENST00000581396.5
CDS-3UTR CAA 90 bp GGAGGCCTGGGAGCAGACACGGTGGCATTTCCATGGAAACACAGGTGTGCAGGCGAACTCTGTTTTCGATaGTCTAGTGCAGAAGCAAGT +
Preference number: 5 (lower is better)
Translates to: GGLGADTVAFPWKHRCAGELCFR*SSAEAS
Trigger: ACTTGCTTCTGCACTAGACAATCGAAAACAGAGTTC...GCCTGCACACCTGTGTTTCCATGGAAATGCCACCGTGTCTGCTCCCAGGCCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000535933.5
ENST00000540946.5
ENST00000581396.5
CDS-3UTR CAA 90 bp GTAACCCAAGTGGGTGAGACGTCCCCAAAGCCGACAGTGCAGAAGCTCCCAGGGGAACTCTGTTTTCGATaGTCTAGTGCAGAAGCAAGT +
Preference number: 5 (lower is better)
Translates to: VTQVGETSPKPTVQKLPGELCFR*SSAEAS
Trigger: ACTTGCTTCTGCACTAGACAATCGAAAACAGAGTTC...CCCTGGGAGCTTCTGCACTGTCGGCTTTGGGGACGTCTCACCCACTTGGGTTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR CAA 90 bp GAGCCTGCAGTGTGTGCGTGGCAGTTTGGTTTATTGGTAGTGTCGTCTCAGCAGAGTCTCTGGCTGCAGTaGTCCCACCACTCAGAGAAA +
Preference number: 5 (lower is better)
Translates to: EPAVCAWQFGLLVVSSQQSLWLQ*SHHSEK
Trigger: TTTCTCTGAGTGGTGGGACAACTGCAGCCAGAGACT...CTGCTGAGACGACACTACCAATAAACCAAACTGCCACGCACACACTGCAGGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379504.8
ENST00000478943.5
ENST00000581396.5
CDS GCA 90 bp GCCATGGGAAATTCAACCCCTTTCCTCTTCAGCTCCTCATATATGTaGACAACGCCGGTGAGATCAGGACTGCTTCGAAAGGCATCAGCC +
Preference number: 5 (lower is better)
Translates to: AMGNSTPFLFSSSYM*TTPVRSGLLRKASA
Trigger: GGCTGATGCCTTTCGAAGCAGTCCTGATCTCACCGGCGTTGTGCACATATATGAGGAGCTGAAGAGGAAAGGGGTTGAATTTCCCATGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379504.8
ENST00000535933.5
ENST00000537091.2
ENST00000581396.5
CDS-3UTR CAA 90 bp TGGCATTTCCATGGAAACACAGGTGTGCAGGCCGTGTGGAGCTGGGGATGTAGGGTGGGAGGGTTGTTCTaGGGAGATATAATTTTGACC +
Preference number: 5 (lower is better)
Translates to: WHFHGNTGVQAVWSWGCRVGGLF*GDIILT
Trigger: GGTCAAAATTATATCTCCCAAGAACAACCCTCCCAC...CCTACATCCCCAGCTCCACACGGCCTGCACACCTGTGTTTCCATGGAAATGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000535933.5
ENST00000540946.5
CDS-3UTR CAA 90 bp CTAGTGGGAGGCCTGGGAGCAGACACGGTGGCATTTCCATGGAAACACAGGTGTGTGGGAGGGTTGTTCTaGGGAGATATAATTTTGACC +
Preference number: 5 (lower is better)
Translates to: LVGGLGADTVAFPWKHRCVGGLF*GDIILT
Trigger: GGTCAAAATTATATCTCCCAAGAACAACCCTCCCAC...ACACCTGTGTTTCCATGGAAATGCCACCGTGTCTGCTCCCAGGCCTCCCACTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000535933.5
ENST00000540946.5
CDS-3UTR CAA 90 bp CTGGGCTGGCAGCTGAATGATGGAGAGAGGGTCAAGAAGGTGAGAGACCCCCACACAATGGTGGGAGGGTaGTTCTTGGGAGATATAATT +
Preference number: 5 (lower is better)
Translates to: LGWQLNDGERVKKVRDPHTMVGG*FLGDII
Trigger: AATTATATCTCCCAAGAACAACCCTCCCACCATTGT...GTGGGGGTCTCTCACCTTCTTGACCCTCTCTCCATCATTCAGCTGCCAGCCCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000318094.14
ENST00000379504.8
CDS-3UTR CAA 90 bp GAGCCTGCAGTGTGTGCGTGGCAGTTTGGTTTATTGGTAGTGTCGTCTCAGCAGAATAGGAACCAGCACTaGTCCTCTGCTGTGATTGGG +
Preference number: 5 (lower is better)
Translates to: EPAVCAWQFGLLVVSSQQNRNQH*SSAVIG
Trigger: CCCAATCACAGCAGAGGACAAGTGCTGGTTCCTATT...CTGCTGAGACGACACTACCAATAAACCAAACTGCCACGCACACACTGCAGGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379504.8
ENST00000581396.5
CDS-3UTR CAA 90 bp GGTGGCATTTCCATGGAAACACAGGTGTGCAGGCCGTGTGGAGCTGGGGATGTATATCGAAGGAAGACGTaGTTGAGGTCATCGTTCACA +
Preference number: 5 (lower is better)
Translates to: GGISMETQVCRPCGAGDVYRRKT*LRSSFT
Trigger: TGTGAACGATGACCTCAACAACGTCTTCCTTCGATA...TACATCCCCAGCTCCACACGGCCTGCACACCTGTGTTTCCATGGAAATGCCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000535933.5
ENST00000540946.5
ENST00000581396.5
CDS-3UTR CAA 90 bp ATGAGTGCAGCACACCCTGCTCTTCCAGAGATGCCACAAAGCCCCTTCAGGGAGTATCGAAGGAAGACGTaGTTGAGGTCATCGTTCACA +
Preference number: 5 (lower is better)
Translates to: MSAAHPALPEMPQSPFREYRRKT*LRSSFT
Trigger: TGTGAACGATGACCTCAACAACGTCTTCCTTCGATA...CTCCCTGAAGGGGCTTTGTGGCATCTCTGGAAGAGCAGGGTGTGCTGCACTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000478943.5
ENST00000581396.5
CDS-3UTR CAA 90 bp AGTGGGAGGCCTGGGAGCAGACACGGTGGCATTTCCATGGAAACACAGGTGTGCCCCAGGTCTATTAAGTaGTCTTCGGTTACTTCATTC +
Preference number: 5 (lower is better)
Translates to: SGRPGSRHGGISMETQVCPRSIK*SSVTSF
Trigger: GAATGAAGTAACCGAAGACAACTTAATAGACCTGGG...GCACACCTGTGTTTCCATGGAAATGCCACCGTGTCTGCTCCCAGGCCTCCCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000535933.5
ENST00000540946.5
ENST00000581396.5
CDS-3UTR CAA 90 bp AGAGTCTCTGGCTGCAGTTGTCCCACCACTCAGAGAAAAGAAGTGGCTGAAGCTAGTCTCTGGCTGCAGTaGTCCCACCACTCAGAGAAA +
Preference number: 5 (lower is better)
Translates to: RVSGCSCPTTQRKEVAEASLWLQ*SHHSEK
Trigger: TTTCTCTGAGTGGTGGGACAACTGCAGCCAGAGACT...AGCTTCAGCCACTTCTTTTCTCTGAGTGGTGGGACAACTGCAGCCAGAGACTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000581396.5
CDS-3UTR CAA 90 bp AGGGGAGAGAGTCTCTGGCTGCAGTTGTCCCACCACTCAGAGAAAAGAAGTGGCTGGCAGTTTGGTTTATaGGTAGTGTCGTCTCAGCAG +
Preference number: 5 (lower is better)
Translates to: RGESLWLQLSHHSEKRSGWQFGL*VVSSQQ
Trigger: CTGCTGAGACGACACTACCAATAAACCAAACTGCCA...GCCACTTCTTTTCTCTGAGTGGTGGGACAACTGCAGCCAGAGACTCTCTCCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000478943.5
ENST00000581396.5
CDS TCA 90 bp CAACCCCTTTCCTCTTCAGCTCCTCATATATGTGCACAACGCCGGTaGGATCAGGACTGCTTCGAAAGGCATCAGCCCATGCTGTTAATG +
Preference number: 5 (lower is better)
Translates to: QPLSSSAPHICAQRR*DQDCFERHQPMLLM
Trigger: CATTAACAGCATGGGCTGATGCCTTTCGAAGCAGTCCTGATCTCACCGGCGTTGTGCACATATATGAGGAGCTGAAGAGGAAAGGGGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537091.2
ENST00000581396.5
CDS-3UTR CAA 90 bp TGGCAGGGCCTCAGAGACAACCCAAGTCACAACCCAAAGGCAGCCAAAGGGCTGTTGGGAGATATAATTTaGACCAGAACACTGTCGATG +
Preference number: 5 (lower is better)
Translates to: WQGLRDNPSHNPKAAKGLLGDII*TRTLSM
Trigger: CATCGACAGTGTTCTGGTCAAAATTATATCTCCCAA...CAGCCCTTTGGCTGCCTTTGGGTTGTGACTTGGGTTGTCTCTGAGGCCCTGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379504.8
CDS-3UTR CAA 90 bp ATGAGTGCAGCACACCCTGCTCTTCCAGAGATGCCACAAAGCCCCTTCAGGGAGACAATGGTGGGAGGGTaGTTCTTGGGAGATATAATT +
Preference number: 5 (lower is better)
Translates to: MSAAHPALPEMPQSPFRETMVGG*FLGDII
Trigger: AATTATATCTCCCAAGAACAACCCTCCCACCATTGT...CTCCCTGAAGGGGCTTTGTGGCATCTCTGGAAGAGCAGGGTGTGCTGCACTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318094.14
ENST00000379504.8
CDS-3UTR CAA 90 bp GGCTGGCAGCTGAATGATGGAGAGAGGGTCAAGAAGGTGAGAGACCCCCACCATCCCAGGTCTATTAAGTaGTCTTCGGTTACTTCATTC +
Preference number: 5 (lower is better)
Translates to: GWQLNDGERVKKVRDPHHPRSIK*SSVTSF
Trigger: GAATGAAGTAACCGAAGACAACTTAATAGACCTGGG...ATGGTGGGGGTCTCTCACCTTCTTGACCCTCTCTCCATCATTCAGCTGCCAGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000478943.5
ENST00000581396.5
CDS-3UTR CAA 90 bp TGGCATTTCCATGGAAACACAGGTGTGCAGGCCGTGTGGAGCTGGGGATGTAGGCCCAGGTCTATTAAGTaGTCTTCGGTTACTTCATTC +
Preference number: 5 (lower is better)
Translates to: WHFHGNTGVQAVWSWGCRPRSIK*SSVTSF
Trigger: GAATGAAGTAACCGAAGACAACTTAATAGACCTGGG...CCTACATCCCCAGCTCCACACGGCCTGCACACCTGTGTTTCCATGGAAATGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000535933.5
ENST00000540946.5
ENST00000581396.5
CDS-3UTR CAA 90 bp ATGAGTGCAGCACACCCTGCTCTTCCAGAGATGCCACAAAGCCCCTTCAGGGAGCCCAGGTCTATTAAGTaGTCTTCGGTTACTTCATTC +
Preference number: 5 (lower is better)
Translates to: MSAAHPALPEMPQSPFREPRSIK*SSVTSF
Trigger: GAATGAAGTAACCGAAGACAACTTAATAGACCTGGG...CTCCCTGAAGGGGCTTTGTGGCATCTCTGGAAGAGCAGGGTGTGCTGCACTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000478943.5
ENST00000581396.5
CDS-3UTR CAA 90 bp AGCAGACACGGTGGCATTTCCATGGAAACACAGGTGTGCAGGCCGTGTGGAGCTGAACTCTGTTTTCGATaGTCTAGTGCAGAAGCAAGT +
Preference number: 5 (lower is better)
Translates to: SRHGGISMETQVCRPCGAELCFR*SSAEAS
Trigger: ACTTGCTTCTGCACTAGACAATCGAAAACAGAGTTC...AGCTCCACACGGCCTGCACACCTGTGTTTCCATGGAAATGCCACCGTGTCTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000535933.5
ENST00000540946.5
ENST00000581396.5
CDS-3UTR CAA 90 bp GGTGGCATTTCCATGGAAACACAGGTGTGCAGGCCGTGTGGAGCTGGGGATGTAGAACTCTGTTTTCGATaGTCTAGTGCAGAAGCAAGT +
Preference number: 5 (lower is better)
Translates to: GGISMETQVCRPCGAGDVELCFR*SSAEAS
Trigger: ACTTGCTTCTGCACTAGACAATCGAAAACAGAGTTC...TACATCCCCAGCTCCACACGGCCTGCACACCTGTGTTTCCATGGAAATGCCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000535933.5
ENST00000540946.5
ENST00000581396.5
CDS TCA 90 bp AGAAGGTCAGAGTGGGCAAGAGACAAGCCACAGCAGTGCTTGGCTTaGGACATCAGGAAAGACTCAAAACCAACACAACAGTGGGTCTGT +
Preference number: 5 (lower is better)
Translates to: RRSEWARDKPQQCLA*DIRKDSKPTQQWVC
Trigger: ACAGACCCACTGTTGTGTTGGTTTTGAGTCTTTCCTGATGTCTCAAGCCAAGCACTGCTGTGGCTTGTCTCTTGCCCACTCTGACCTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577517.1
CDS-3UTR CAA 90 bp TGGCATTTCCATGGAAACACAGGTGTGCAGGCCGTGTGGAGCTGGGGATGTAGGTTGGGAGATATAATTTaGACCAGAACACTGTCGATG +
Preference number: 5 (lower is better)
Translates to: WHFHGNTGVQAVWSWGCRLGDII*TRTLSM
Trigger: CATCGACAGTGTTCTGGTCAAAATTATATCTCCCAA...CCTACATCCCCAGCTCCACACGGCCTGCACACCTGTGTTTCCATGGAAATGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000535933.5
ENST00000540946.5
CDS-3UTR CAA 90 bp CTAGTGGGAGGCCTGGGAGCAGACACGGTGGCATTTCCATGGAAACACAGGTGTTTGGGAGATATAATTTaGACCAGAACACTGTCGATG +
Preference number: 5 (lower is better)
Translates to: LVGGLGADTVAFPWKHRCLGDII*TRTLSM
Trigger: CATCGACAGTGTTCTGGTCAAAATTATATCTCCCAA...ACACCTGTGTTTCCATGGAAATGCCACCGTGTCTGCTCCCAGGCCTCCCACTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000535933.5
ENST00000540946.5
CDS TCA 90 bp ATGAATCCTCCTGTCCAGGGACCATTTCTGTTAACATCTCAGACATaGCTTTTGTGTTTCCTCGAACGACGTCCAGTTCACTCCGCAGCC +
Preference number: 5 (lower is better)
Translates to: MNPPVQGPFLLTSQT*LLCFLERRPVHSAA
Trigger: GGCTGCGGAGTGAACTGGACGTCGTTCGAGGAAACACAAAAGTCATGTCTGAGATGTTAACAGAAATGGTCCCTGGACAGGAGGATTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000535933.5
ENST00000537091.2
ENST00000540946.5
ENST00000542206.5
ENST00000581396.5
CDS-3UTR CAA 90 bp CAGTTTGGTTTATTGGTAGTGTCGTCTCAGCAGCGTGCCACATGGCCACCATCTTATCGAAGGAAGACGTaGTTGAGGTCATCGTTCACA +
Preference number: 5 (lower is better)
Translates to: QFGLLVVSSQQRATWPPSYRRKT*LRSSFT
Trigger: TGTGAACGATGACCTCAACAACGTCTTCCTTCGATA...AGATGGTGGCCATGTGGCACGCTGCTGAGACGACACTACCAATAAACCAAACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000478943.5
ENST00000581396.5
CDS-3UTR CAA 90 bp AACTCCCTGAATTCCAGATGGCTCATCCTAGCCAGAGCTGCTATCAGAGGAGCCTTTTACAATCAACCTTaGGTGGTGAAGGGTACATGG +
Preference number: 5 (lower is better)
Translates to: NSLNSRWLILARAAIRGAFYNQP*VVKGTW
Trigger: CCATGTACCCTTCACCACCAAAGGTTGATTGTAAAA...GGCTCCTCTGATAGCAGCTCTGGCTAGGATGAGCCATCTGGAATTCAGGGAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468944.1
CDS-3UTR CAA 90 bp AGAGTCTCTGGCTGCAGTTGTCCCACCACTCAGAGAAAAGAAGTGGCTGAAGCTGAACTCTGTTTTCGATaGTCTAGTGCAGAAGCAAGT +
Preference number: 5 (lower is better)
Translates to: RVSGCSCPTTQRKEVAEAELCFR*SSAEAS
Trigger: ACTTGCTTCTGCACTAGACAATCGAAAACAGAGTTC...AGCTTCAGCCACTTCTTTTCTCTGAGTGGTGGGACAACTGCAGCCAGAGACTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000581396.5
CDS-3UTR CAA 90 bp AGGGGAGAGAGTCTCTGGCTGCAGTTGTCCCACCACTCAGAGAAAAGAAGTGGCAAAAGGAGTACATGCTaGTTCATAAAACCAGACATG +
Preference number: 5 (lower is better)
Translates to: RGESLWLQLSHHSEKRSGKRSTC*FIKPDM
Trigger: CATGTCTGGTTTTATGAACAAGCATGTACTCCTTTT...GCCACTTCTTTTCTCTGAGTGGTGGGACAACTGCAGCCAGAGACTCTCTCCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000478943.5
CDS CCA 72 bp CCGGTGTCCACGGGGTGCGAGCGGGGACCCGCCATCTaGGGAGGCAAACCACAGAGCTGCTCACAGGGCGAA +
Preference number: 6 (lower is better)
Translates to: PVSTGCERGPAI*GGKPQSCSQGE
Trigger: TTCGCCCTGTGAGCAGCTCTGTGGTTTGCCTCCCCAGATGGCGGGTCCCCGCTCGCACCCCGTGGACACCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000486413.1
ENST00000535933.5
ENST00000540946.5
ENST00000542206.5
ENST00000577794.1
ENST00000581396.5
CDS TCA 72 bp GGCCCGACAGGTCCTGTTGAGCTCTCTCCTCTGTTGTaGATGGCTCATGTCCCCAGGCCAGGCAGGAGAGGG +
Preference number: 6 (lower is better)
Translates to: GPTGPVELSPLL*MAHVPRPGRRG
Trigger: CCCTCTCCTGCCTGGCCTGGGGACATGAGCCATTCACAACAGAGGAGAGAGCTCAACAGGACCTGTCGGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577517.1
CDS CAA 90 bp GTGCGGAGTAGGGAGCAGGAGGCGGCGAGGAATAGGAACCAGCACTaGTCCTCTGCTGTGATTGGGACCTGGGCATGGTCGCAGCTGGAT +
Preference number: 6 (lower is better)
Translates to: VRSREQEAARNRNQH*SSAVIGTWAWSQLD
Trigger: ATCCAGCTGCGACCATGCCCAGGTCCCAATCACAGCAGAGGACAAGTGCTGGTTCCTATTCCTCGCCGCCTCCTGCTCCCTACTCCGCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000537091.2
ENST00000581396.5
CDS TCA 72 bp CACTCCGCAGCCTGGCAATCTGTTCTGAATTGGCTGTaGTGGGGCCAGTCACACTCAGAGCTGGGGCCTGCG +
Preference number: 6 (lower is better)
Translates to: HSAAWQSVLNWL*WGQSHSELGPA
Trigger: CGCAGGCCCCAGCTCTGAGTGTGACTGGCCCCATCACAGCCAATTCAGAACAGATTGCCAGGCTGCGGAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000537091.2
ENST00000581396.5
CDS GCA 72 bp CTGAGCCACACCTCAATGTCGTCCATGACAGATGGCTaGGCAACGGGGATCTATGGAGGCGGCAAGCAGCGG +
Preference number: 6 (lower is better)
Translates to: LSHTSMSSMTDG*ATGIYGGGKQR
Trigger: CCGCTGCTTGCCGCCTCCATAGATCCCCGTTGCGCAGCCATCTGTCATGGACGACATTGAGGTGTGGCTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486413.1
CDS CAA 72 bp AGGGAGCAGGAGGCGGCGAGGAATAGGAACCAGCACTaGTCCTCTGCTGTGATTGGGACCTGGGCATGGTCG +
Preference number: 6 (lower is better)
Translates to: REQEAARNRNQH*SSAVIGTWAWS
Trigger: CGACCATGCCCAGGTCCCAATCACAGCAGAGGACAAGTGCTGGTTCCTATTCCTCGCCGCCTCCTGCTCCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000537091.2
ENST00000581396.5
CDS CCA 72 bp GGTCCTGAGCCACACCTCAATGTCGTCCATGACAGATaGCTGCGCAACGGGGATCTATGGAGGCGGCAAGCA +
Preference number: 6 (lower is better)
Translates to: GPEPHLNVVHDR*LRNGDLWRRQA
Trigger: TGCTTGCCGCCTCCATAGATCCCCGTTGCGCAGCCATCTGTCATGGACGACATTGAGGTGTGGCTCAGGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486413.1
CDS CCA 72 bp AGGAACCAGCACTTGTCCTCTGCTGTGATTGGGACCTaGGCATGGTCGCAGCTGGATCCACTTCAGGGACAC +
Preference number: 6 (lower is better)
Translates to: RNQHLSSAVIGT*AWSQLDPLQGH
Trigger: GTGTCCCTGAAGTGGATCCAGCTGCGACCATGCCCAGGTCCCAATCACAGCAGAGGACAAGTGCTGGTTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000537091.2
ENST00000581396.5
CDS TCA 72 bp GTGGTCTCTCTTTTTGTGGCCAACTCTCCTCTGTTGTaGATGGCTCATGTCCCCAGGCCAGGCAGGAGAGGG +
Preference number: 6 (lower is better)
Translates to: VVSLFVANSPLL*MAHVPRPGRRG
Trigger: CCCTCTCCTGCCTGGCCTGGGGACATGAGCCATTCACAACAGAGGAGAGTTGGCCACAAAAAGAGAGACCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000478943.5
CDS CCA 72 bp GGCTCCAGGTCAGACTCCCCACCTCTACCTCTCTTCTaGGCCGAGGACAGAAAAGTCCCTTCTGAACTCTGT +
Preference number: 6 (lower is better)
Translates to: GSRSDSPPLPLF*AEDRKVPSELC
Trigger: ACAGAGTTCAGAAGGGACTTTTCTGTCCTCGGCCCAGAAGAGAGGTAGAGGTGGGGAGTCTGACCTGGAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000535933.5
ENST00000542206.5
CDS CAA 72 bp TCCGGCTCCCACCTCTCGTATCGAAGGAAGACGTTGTaGAGGTCATCGTTCACATGCAGCAGCTCCTCGGTG +
Preference number: 6 (lower is better)
Translates to: SGSHLSYRRKTL*RSSFTCSSSSV
Trigger: CACCGAGGAGCTGCTGCATGTGAACGATGACCTCAACAACGTCTTCCTTCGATACGAGAGGTGGGAGCCGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537091.2
CDS TCA 72 bp ATGCCAGCATCACCTCTCTGTAGTTCCGGTTCCCGTTaGGCCGCTTCTTCAGGGCTCGAATGGCATCCTTTG +
Preference number: 6 (lower is better)
Translates to: MPASPLCSSGSR*AASSGLEWHPL
Trigger: CAAAGGATGCCATTCGAGCCCTGAAGAAGCGGCTCAACGGGAACCGGAACTACAGAGAGGTGATGCTGGCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000535933.5
ENST00000537091.2
ENST00000540946.5
ENST00000542206.5
ENST00000579586.1
ENST00000581396.5
CDS TCA 72 bp CATGTCAAAGCCGTCACGGGGATTACATTGCTGGAGTaGACTGAGGGTGCCACTGACGCTCTCTGTCCCCAA +
Preference number: 6 (lower is better)
Translates to: HVKAVTGITLLE*TEGATDALCPQ
Trigger: TTGGGGACAGAGAGCGTCAGTGGCACCCTCAGTTCACTCCAGCAATGTAATCCCCGTGACGGCTTTGACATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000535933.5
ENST00000540946.5
ENST00000542206.5
ENST00000581396.5
CDS CCA 72 bp GGAAAATCTCGCTGTAAGGAATGGGTTCACCCTGCATaGCTGCACCCTCCTGCTTCCAAGCTTCTCCTGTGG +
Preference number: 6 (lower is better)
Translates to: GKSRCKEWVHPA*LHPPASKLLLW
Trigger: CCACAGGAGAAGCTTGGAAGCAGGAGGGTGCAGCCATGCAGGGTGAACCCATTCCTTACAGCGAGATTTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468944.1
CDS GCA 72 bp TGGGCAAACATGTCAAAGCCGTCACGGGGATTACATTaGTGGAGTGAACTGAGGGTGCCACTGACGCTCTCT +
Preference number: 6 (lower is better)
Translates to: WANMSKPSRGLH*WSELRVPLTLS
Trigger: AGAGAGCGTCAGTGGCACCCTCAGTTCACTCCAGCAATGTAATCCCCGTGACGGCTTTGACATGTTTGCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000535933.5
ENST00000540946.5
ENST00000542206.5
ENST00000581396.5
CDS GCA 72 bp CTGAGCCACACCTCAATGTCGTCCATGACAGATGGCTaGGCAACGGGGATCCCTTCTGAACTCTGTTTTCGA +
Preference number: 6 (lower is better)
Translates to: LSHTSMSSMTDG*ATGIPSELCFR
Trigger: TCGAAAACAGAGTTCAGAAGGGATCCCCGTTGCGCAGCCATCTGTCATGGACGACATTGAGGTGTGGCTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000581396.5
CDS GCA 72 bp CTGAGCCACACCTCAATGTCGTCCATGACAGATGGCTaGGCAACGGGGATCATTCCTTGGGTTATAAGCCAG +
Preference number: 6 (lower is better)
Translates to: LSHTSMSSMTDG*ATGIIPWVISQ
Trigger: CTGGCTTATAACCCAAGGAATGATCCCCGTTGCGCAGCCATCTGTCATGGACGACATTGAGGTGTGGCTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535933.5
ENST00000542206.5
CDS CCA 72 bp GCAAACATGTCAAAGCCGTCACGGGGATTACATTGCTaGAGTGAACTGAGGGTGCCACTGACGCTCTCTGTC +
Preference number: 6 (lower is better)
Translates to: ANMSKPSRGLHC*SELRVPLTLSV
Trigger: GACAGAGAGCGTCAGTGGCACCCTCAGTTCACTCCAGCAATGTAATCCCCGTGACGGCTTTGACATGTTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000535933.5
ENST00000540946.5
ENST00000542206.5
ENST00000581396.5
CDS CCA 72 bp GTCTTGCGCTGCTCAGCCAAGGAGTTTCCTCTCGTCTaGGCAAACATGTCAAAGCCGTCACGGGGATTACAT +
Preference number: 6 (lower is better)
Translates to: VLRCSAKEFPLV*ANMSKPSRGLH
Trigger: ATGTAATCCCCGTGACGGCTTTGACATGTTTGCCCAGACGAGAGGAAACTCCTTGGCTGAGCAGCGCAAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000535933.5
ENST00000540946.5
ENST00000542206.5
ENST00000581396.5
CDS CCA 72 bp GGTCCTGAGCCACACCTCAATGTCGTCCATGACAGATaGCTGCGCAACGGGGATCATTCCTTGGGTTATAAG +
Preference number: 6 (lower is better)
Translates to: GPEPHLNVVHDR*LRNGDHSLGYK
Trigger: CTTATAACCCAAGGAATGATCCCCGTTGCGCAGCCATCTGTCATGGACGACATTGAGGTGTGGCTCAGGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535933.5
ENST00000542206.5
CDS CAA 72 bp AAATCCGGCTCCCACCTCTCGTATCGAAGGAAGACGTaGTTGAGGTCATCGTTCACATGCAGCAGCTCCTCG +
Preference number: 6 (lower is better)
Translates to: KSGSHLSYRRKT*LRSSFTCSSSS
Trigger: CGAGGAGCTGCTGCATGTGAACGATGACCTCAACAACGTCTTCCTTCGATACGAGAGGTGGGAGCCGGATTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537091.2
CDS CAA 90 bp CCAGACCTGTATCGTTCGAACCTCTCGTATCGAAGGAAGACGTTGTaGAGGTCATCGTTCACATGCAGCAGCTCCTCGGTGACCTCCTCA +
Preference number: 6 (lower is better)
Translates to: PDLYRSNLSYRRKTL*RSSFTCSSSSVTSS
Trigger: TGAGGAGGTCACCGAGGAGCTGCTGCATGTGAACGATGACCTCAACAACGTCTTCCTTCGATACGAGAGGTTCGAACGATACAGGTCTGG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000535933.5
ENST00000540946.5
ENST00000542206.5
ENST00000577517.1
ENST00000581396.5
CDS TCA 72 bp TCCTCTTCAGCTCCTCATATATGTGCACAACGCCGGTaGGATCAGGACTGCTTCGAAAGGCATCAGCCCATG +
Preference number: 6 (lower is better)
Translates to: SSSAPHICAQRR*DQDCFERHQPM
Trigger: CATGGGCTGATGCCTTTCGAAGCAGTCCTGATCTCACCGGCGTTGTGCACATATATGAGGAGCTGAAGAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379504.8
ENST00000535933.5
ENST00000537091.2
ENST00000581396.5
CDS CCA 72 bp ACACTGTCGATGAAATCTCGGTTGGCCACAAGGATGTaGAAGCGGTGGCCACAGTTCTTCACACATGTCTCC +
Preference number: 6 (lower is better)
Translates to: TLSMKSRLATRM*KRWPQFFTHVS
Trigger: GGAGACATGTGTGAAGAACTGTGGCCACCGCTTCCACATCCTTGTGGCCAACCGAGATTTCATCGACAGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000535933.5
ENST00000540946.5
ENST00000579586.1
CDS CAA 90 bp AAAAAGAAATCCGGCTCCCACCTCTCGTATCGAAGGAAGACGTTGTaGAGGTCATCGTTCACATGCAGCAGCTCCTCGGTGACCTCCTCA +
Preference number: 6 (lower is better)
Translates to: KKKSGSHLSYRRKTL*RSSFTCSSSSVTSS
Trigger: TGAGGAGGTCACCGAGGAGCTGCTGCATGTGAACGATGACCTCAACAACGTCTTCCTTCGATACGAGAGGTGGGAGCCGGATTTCTTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000537091.2
CDS TCA 72 bp AGGGCCGGCGGTAAGGAAGGTGGCTGTACGCGTTCTTaGAATGGAGAACTTTTTGACTATGAGTGTCCACTC +
Preference number: 6 (lower is better)
Translates to: RAGGKEGGCTRS*NGELFDYECPL
Trigger: GAGTGGACACTCATAGTCAAAAAGTTCTCCATTTCAAGAACGCGTACAGCCACCTTCCTTACCGCCGGCCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000486413.1
CDS CCA 72 bp GTGTGTGTATGGGAGACAGAGCGTCCAAGTCTGCCATaGGAAATTCAACCCCTTTCCTCTTCAGCTCCTCAT +
Preference number: 6 (lower is better)
Translates to: VCVWETERPSLP*EIQPLSSSAPH
Trigger: ATGAGGAGCTGAAGAGGAAAGGGGTTGAATTTCCCATGGCAGACTTGGACGCTCTGTCTCCCATACACACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379504.8
ENST00000535933.5
ENST00000537091.2
ENST00000581396.5
CDS CCA 72 bp GCTCCTAGGGAACACATGCACCTCTGGGTAGCCTGCTaGGTGTGCTTTTCGTCACATTCTATCTCCTTTGAA +
Preference number: 6 (lower is better)
Translates to: APREHMHLWVAC*VCFSSHSISFE
Trigger: TTCAAAGGAGATAGAATGTGACGAAAAGCACACCCAGCAGGCTACCCAGAGGTGCATGTGTTCCCTAGGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478943.5
CDS CAA 72 bp TATCGTTCGAACCTCTCGTATCGAAGGAAGACGTTGTaGAGGTCATCGTTCACATGCAGCAGCTCCTCGGTG +
Preference number: 6 (lower is better)
Translates to: YRSNLSYRRKTL*RSSFTCSSSSV
Trigger: CACCGAGGAGCTGCTGCATGTGAACGATGACCTCAACAACGTCTTCCTTCGATACGAGAGGTTCGAACGATA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000535933.5
ENST00000540946.5
ENST00000542206.5
ENST00000577517.1
ENST00000581396.5
CDS CAA 72 bp CTGTATCGTTCGAACCTCTCGTATCGAAGGAAGACGTaGTTGAGGTCATCGTTCACATGCAGCAGCTCCTCG +
Preference number: 6 (lower is better)
Translates to: LYRSNLSYRRKT*LRSSFTCSSSS
Trigger: CGAGGAGCTGCTGCATGTGAACGATGACCTCAACAACGTCTTCCTTCGATACGAGAGGTTCGAACGATACAG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000535933.5
ENST00000540946.5
ENST00000542206.5
ENST00000577517.1
ENST00000581396.5
CDS CAA 90 bp AAGAAGGTCAGAGTGGGCAAGAGACAAGCCACAGCAGTGCTTGGCTaGAGACATCAGGAAAGACTCAAAACCAACACAACAGTGGGTCTG +
Preference number: 6 (lower is better)
Translates to: KKVRVGKRQATAVLG*RHQERLKTNTTVGL
Trigger: CAGACCCACTGTTGTGTTGGTTTTGAGTCTTTCCTGATGTCTCAAGCCAAGCACTGCTGTGGCTTGTCTCTTGCCCACTCTGACCTTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577517.1
CDS CAA 72 bp ACCACGGCTGGAGACCCTGGCCCCAGGTCTATTAAGTaGTCTTCGGTTACTTCATTCAGTACTCCATTACTG +
Preference number: 6 (lower is better)
Translates to: TTAGDPGPRSIK*SSVTSFSTPLL
Trigger: CAGTAATGGAGTACTGAATGAAGTAACCGAAGACAACTTAATAGACCTGGGGCCAGGGTCTCCAGCCGTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000535933.5
ENST00000540946.5
ENST00000542206.5
ENST00000577517.1
ENST00000581396.5
CDS TCA 72 bp TCGGTTACTTCATTCAGTACTCCATTACTGGCATTTTaGACGGATCGGCCAGACCTGTATCGTTCGAACCTC +
Preference number: 6 (lower is better)
Translates to: SVTSFSTPLLAF*TDRPDLYRSNL
Trigger: GAGGTTCGAACGATACAGGTCTGGCCGATCCGTTCAAAATGCCAGTAATGGAGTACTGAATGAAGTAACCGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000535933.5
ENST00000540946.5
ENST00000542206.5
ENST00000577517.1
ENST00000581396.5
CDS CAA 72 bp TTCGGTTACTTCATTCAGTACTCCATTACTGGCATTTaGAACGGATCGGCCAGACCTGTATCGTTCGAACCT +
Preference number: 6 (lower is better)
Translates to: FGYFIQYSITGI*NGSARPVSFEP
Trigger: AGGTTCGAACGATACAGGTCTGGCCGATCCGTTCAAAATGCCAGTAATGGAGTACTGAATGAAGTAACCGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318094.14
ENST00000379504.8
ENST00000395739.8
ENST00000478943.5
ENST00000535933.5
ENST00000540946.5
ENST00000542206.5
ENST00000577517.1
ENST00000581396.5
CDS CCA 72 bp CTCAACAAAATATTCCAGACACCGTTCTCCATCACTTaGTACAGACTGCCTCATTCCTTTCTGTGTGTTTCA +
Preference number: 6 (lower is better)
Translates to: LNKIFQTPFSIT*YRLPHSFLCVS
Trigger: TGAAACACACAGAAAGGAATGAGGCAGTCTGTACCAAGTGATGGAGAACGGTGTCTGGAATATTTTGTTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478943.5
CDS CAA 72 bp TGTATCTCGCCATTCTTCTATTGCTGGACATTTAGATaGTGGTCTCTCTTTTTGTGGCCAACTCTCCTCTGT +
Preference number: 6 (lower is better)
Translates to: CISPFFYCWTFR*WSLFLWPTLLC
Trigger: ACAGAGGAGAGTTGGCCACAAAAAGAGAGACCACAATCTAAATGTCCAGCAATAGAAGAATGGCGAGATACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000478943.5
CDS CAA 72 bp TCTCAACAAAATATTCCAGACACCGTTCTCCATCACTaGGTACAGACTGCCTCATTCCTTTCTGTGTGTTTC +
Preference number: 6 (lower is better)
Translates to: SQQNIPDTVLHH*VQTASFLSVCF
Trigger: GAAACACACAGAAAGGAATGAGGCAGTCTGTACCAAGTGATGGAGAACGGTGTCTGGAATATTTTGTTGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478943.5
CDS GCA 72 bp TATTCCAGACACCGTTCTCCATCACTTGGTACAGACTaGCTCATTCCTTTCTGTGTGTTTCATAATGTATCT +
Preference number: 6 (lower is better)
Translates to: YSRHRSPSLGTD*LIPFCVFHNVS
Trigger: AGATACATTATGAAACACACAGAAAGGAATGAGGCAGTCTGTACCAAGTGATGGAGAACGGTGTCTGGAATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478943.5
CDS CAA 72 bp CCAACTCTAATCTCTCTCCCTCTCCCTCTCTTTCCTTaGTTTATGAAAGAAATCCCTCTGTTATGGCAACAA +
Preference number: 6 (lower is better)
Translates to: PTLISLPLPLFP*FMKEIPLLWQQ
Trigger: TTGTTGCCATAACAGAGGGATTTCTTTCATAAACAAAGGAAAGAGAGGGAGAGGGAGAGAGATTAGAGTTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537091.2
CDS CAA 90 bp ATTGCTTTTTCTCAACAAAATATTCCAGACACCGTTCTCCATCACTaGGTACAGACTGCCTCATTCCTTTCTGTGTGTTTCATAATGTAT +
Preference number: 6 (lower is better)
Translates to: IAFSQQNIPDTVLHH*VQTASFLSVCFIMY
Trigger: ATACATTATGAAACACACAGAAAGGAATGAGGCAGTCTGTACCAAGTGATGGAGAACGGTGTCTGGAATATTTTGTTGAGAAAAAGCAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000478943.5
CDS CAA 90 bp GAGTATTTTCCAACTCTAATCTCTCTCCCTCTCCCTCTCTTTCCTTaGTTTATGAAAGAAATCCCTCTGTTATGGCAACAATCTTTTCAA +
Preference number: 6 (lower is better)
Translates to: EYFPTLISLPLPLFP*FMKEIPLLWQQSFQ
Trigger: TTGAAAAGATTGTTGCCATAACAGAGGGATTTCTTTCATAAACAAAGGAAAGAGAGGGAGAGGGAGAGAGATTAGAGTTGGAAAATACTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537091.2