RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TOM1L1 (Homo sapiens)

Ensembl gene IDs: ENSG00000141198

Ensembl transcript IDs: ENST00000445275.6, ENST00000536554.5, ENST00000570371.5, ENST00000570623.1, ENST00000570965.5, ENST00000571319.5, ENST00000572158.5, ENST00000572298.5, ENST00000572360.5, ENST00000572405.5, ENST00000572905.1, ENST00000573607.5, ENST00000574744.1, ENST00000575333.5, ENST00000575909.1, ENST00000576932.5

Found 396 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GTGGCCCTAGGCATCCGGGGACTGGGACTTAGGTCGAGGAGATCTTaGGATGGGGCAGAAGGCTCACTGGTAGTATTGGTGGCTTCCTTC +
Preference number: 1 (lower is better)
Translates to: VALGIRGLGLRSRRS*DGAEGSLVVLVASF
Trigger: GAAGGAAGCCACCAATACTACCAGTGAGCCTTCTGCCCCATCTCAAGATCTCCTCGACCTAAGTCCCAGTCCCCGGATGCCTAGGGCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571319.5
3UTR TCA 90 bp GCTCAACAGTTACATCTTCGTTCTCCACCACCACAAGCAGGTCCATaGTCCTCTCCTGCATCTCCCGACCTGTTTTATAGAGTTTCTGCA +
Preference number: 1 (lower is better)
Translates to: AQQLHLRSPPPQAGP*SSPASPDLFYRVSA
Trigger: TGCAGAAACTCTATAAAACAGGTCGGGAGATGCAGGAGAGGATCATGGACCTGCTTGTGGTGGTGGAGAACGAAGATGTAACTGTTGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570965.5
ENST00000571319.5
3UTR TCA 90 bp GGGGGTATCTCTGTATTCTCCAAGGCTAGCAAGTTCATCTGTGGATaGAGACTGGGTTTTAAGTTGTTTGTTACATCAGAACTTGGAAGG +
Preference number: 1 (lower is better)
Translates to: GGISVFSKASKFICG*RLGFKLFVTSELGR
Trigger: CCTTCCAAGTTCTGATGTAACAAACAACTTAAAACCCAGTCTTCATCCACAGATGAACTTGCTAGCCTTGGAGAATACAGAGATACCCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000571319.5
3UTR TCA 90 bp TTCCTTCTACATTTCACAACCACTCAGTTCATACCTTGTAATCCCTaGATTTCTCCGCTTGCATCAGAGATACTCCCTTACCTGATGCTG +
Preference number: 1 (lower is better)
Translates to: FLLHFTTTQFIPCNP*ISPLASEILPYLML
Trigger: CAGCATCAGGTAAGGGAGTATCTCTGATGCAAGCGGAGAAATTCAGGGATTACAAGGTATGAACTGAGTGGTTGTGAAATGTAGAAGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575333.5
3UTR CCA 90 bp TTAGTAAGCATTTCTATACTTCTTAGCTTGTTGCCTGTTAGTAAATaGGTCATAAATATGGCCTATGAGCCGGGCACAGTGGCTCATGCC +
Preference number: 1 (lower is better)
Translates to: LVSISILLSLLPVSK*VINMAYEPGTVAHA
Trigger: GGCATGAGCCACTGTGCCCGGCTCATAGGCCATATTTATGACCCATTTACTAACAGGCAACAAGCTAAGAAGTATAGAAATGCTTACTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576932.5
3UTR CCA 90 bp CTATGTCTTCATGGTTTTCAGACCCAGGAGTATTCTCCATCAATATaGCGGACATCACTCGCACATTCATTTTCACCATATCCAATTCAC +
Preference number: 1 (lower is better)
Translates to: LCLHGFQTQEYSPSI*RTSLAHSFSPYPIH
Trigger: GTGAATTGGATATGGTGAAAATGAATGTGCGAGTGATGTCCGCCATATTGATGGAGAATACTCCTGGGTCTGAAAACCATGAAGACATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000570965.5
ENST00000571319.5
3UTR CCA 90 bp TCAAAAGTTAGGTGGCTGAGAGGTGGCAGAACTGGCATTTCAACTTaGACTTCTCTGACTTTAAAGCCTGTGTTTTTCCTTCTACATTTC +
Preference number: 1 (lower is better)
Translates to: SKVRWLRGGRTGIST*TSLTLKPVFFLLHF
Trigger: GAAATGTAGAAGGAAAAACACAGGCTTTAAAGTCAGAGAAGTCCAAGTTGAAATGCCAGTTCTGCCACCTCTCAGCCACCTAACTTTTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000575333.5
3UTR TCA 90 bp AACCTCACATCTCTCCTTCTCCCCACCCATGATCCCACCATATACTaGACAAATTTATACTACAGTATCTATAATACTTCATTATGTTTG +
Preference number: 1 (lower is better)
Translates to: NLTSLLLPTHDPTIY*TNLYYSIYNTSLCL
Trigger: CAAACATAATGAAGTATTATAGATACTGTAGTATAAATTTGTTCAGTATATGGTGGGATCATGGGTGGGGAGAAGGAGAGATGTGAGGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572405.5
3UTR CCA 90 bp TTAACTAAATTCTCTTTAACAAATTCCTTCTTCACAATCAGAGACTaGAAACTTGGACCACAGTTCTGCACACACATGTCAATAAGTGAC +
Preference number: 1 (lower is better)
Translates to: LTKFSLTNSFFTIRD*KLGPQFCTHMSISD
Trigger: GTCACTTATTGACATGTGTGTGCAGAACTGTGGTCCAAGTTTCCAGTCTCTGATTGTGAAGAAGGAATTTGTTAAAGAGAATTTAGTTAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570965.5
3UTR-3UTR TCA 90 bp TTGACTTCGCTTACATCCACACCTCCTGGGAAGCCCTGTGACCAAGTCTTAATGCGAGGTATACTTCTTTaGCTTCGCTTACATCCACAC +
Preference number: 2 (lower is better)
Translates to: LTSLTSTPPGKPCDQVLMRGILL*LRLHPH
Trigger: GTGTGGATGTAAGCGAAGTCAAAGAAGTATACCTCG...CATTAAGACTTGGTCACAGGGCTTCCCAGGAGGTGTGGATGTAAGCGAAGTCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000570965.5
ENST00000571319.5
ENST00000572360.5
3UTR-3UTR GCA 90 bp GGGGTATCTCTGTATTCTCCAAGGCTAGCAAGTTCATCTGTGGATGAAGACTGGTCCATGATCCTCTCCTaGATCTCCCGACCTGTTTTA +
Preference number: 2 (lower is better)
Translates to: GVSLYSPRLASSSVDEDWSMILS*ISRPVL
Trigger: TAAAACAGGTCGGGAGATGCAGGAGAGGATCATGGA...CCAGTCTTCATCCACAGATGAACTTGCTAGCCTTGGAGAATACAGAGATACCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571319.5
3UTR-3UTR TCA 90 bp TGCAGTTTTCCAATCTGTTCTGGGACCAATGTAACAGTCGAGTTCTTTGGAGCATCTGAGGGAGGAAACTaGACGCCTTTCTTAACCAGG +
Preference number: 2 (lower is better)
Translates to: CSFPICSGTNVTVEFFGASEGGN*TPFLTR
Trigger: CCTGGTTAAGAAAGGCGTTCAGTTTCCTCCCTCAGA...TGCTCCAAAGAACTCGACTGTTACATTGGTCCCAGAACAGATTGGAAAACTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570965.5
3UTR-3UTR TCA 90 bp AGTTTCTGCAGAAGCTCTATGTCTTCATGGTTTTCAGACCCAGGAGTATTCTCCTCCTGGGAAGCCCTGTaGCCAAGTCTTAATGAAATT +
Preference number: 2 (lower is better)
Translates to: SFCRSSMSSWFSDPGVFSSWEAL*PSLNEI
Trigger: AATTTCATTAAGACTTGGTCACAGGGCTTCCCAGGA...GGAGAATACTCCTGGGTCTGAAAACCATGAAGACATAGAGCTTCTGCAGAAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570965.5
ENST00000571319.5
3UTR-3UTR TCA 90 bp TTTGAATGTTCCAGAAAATTATCATATGCGTGGCTTGAGGTGAGGTTTTGGCTGGATTATTCATGGTGTTaGGTTCTCCCAGAGTGGCCC +
Preference number: 2 (lower is better)
Translates to: FECSRKLSYAWLEVRFWLDYSWC*VLPEWP
Trigger: GGGCCACTCTGGGAGAACTCAACACCATGAATAATC...CAGCCAAAACCTCACCTCAAGCCACGCATATGATAATTTTCTGGAACATTCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571319.5
3UTR-3UTR GCA 90 bp AGTTTCTGCAGAAGCTCTATGTCTTCATGGTTTTCAGACCCAGGAGTATTCTCCCTTCAAAGCTTTCACTaGATCTTTTGGCCCATCCTG +
Preference number: 2 (lower is better)
Translates to: SFCRSSMSSWFSDPGVFSLQSFH*IFWPIL
Trigger: CAGGATGGGCCAAAAGATGCAGTGAAAGCTTTGAAG...GGAGAATACTCCTGGGTCTGAAAACCATGAAGACATAGAGCTTCTGCAGAAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570965.5
3UTR-3UTR CCA 90 bp TCACCTGAATTAGCTCAACAGTTACATCTTCGTTCTCCACCACCACAAGCAGGTTATTCTCCATCAATATaGCGGACATCACTCGCACAT +
Preference number: 2 (lower is better)
Translates to: SPELAQQLHLRSPPPQAGYSPSI*RTSLAH
Trigger: ATGTGCGAGTGATGTCCGCCATATTGATGGAGAATA...ACCTGCTTGTGGTGGTGGAGAACGAAGATGTAACTGTTGAGCTAATTCAGGTGA
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570965.5
ENST00000571319.5
3UTR-3UTR CCA 90 bp TCACCTGAATTAGCTCAACAGTTACATCTTCGTTCTCCACCACCACAAGCAGGTAGCTCTATGTCTTCATaGTTTTCAGACCCAGGAGTA +
Preference number: 2 (lower is better)
Translates to: SPELAQQLHLRSPPPQAGSSMSS*FSDPGV
Trigger: TACTCCTGGGTCTGAAAACCATGAAGACATAGAGCT...ACCTGCTTGTGGTGGTGGAGAACGAAGATGTAACTGTTGAGCTAATTCAGGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570965.5
ENST00000571319.5
3UTR-3UTR TCA 90 bp AAACTGAACGCCTTTCTTAACCAGGTCGAGGTATACTTCTTTGACTTCGCTTACTCCTGGGAAGCCCTGTaGCCAAGTCTTAATGAAATT +
Preference number: 2 (lower is better)
Translates to: KLNAFLNQVEVYFFDFAYSWEAL*PSLNEI
Trigger: AATTTCATTAAGACTTGGTCACAGGGCTTCCCAGGA...GTAAGCGAAGTCAAAGAAGTATACCTCGACCTGGTTAAGAAAGGCGTTCAGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000570965.5
ENST00000571319.5
ENST00000572360.5
3UTR-3UTR TCA 90 bp ACTGAATTTGAATGTTCCAGAAAATTATCATATGCGTGGCTTGAGGTGAGGTTTTCTGAGGGAGGAAACTaGACGCCTTTCTTAACCAGG +
Preference number: 2 (lower is better)
Translates to: TEFECSRKLSYAWLEVRFSEGGN*TPFLTR
Trigger: CCTGGTTAAGAAAGGCGTTCAGTTTCCTCCCTCAGA...AAACCTCACCTCAAGCCACGCATATGATAATTTTCTGGAACATTCAAATTCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571319.5
3UTR-3UTR GCA 90 bp TTTGAATGTTCCAGAAAATTATCATATGCGTGGCTTGAGGTGAGGTTTTGGCTGTCCAATCTCTTGTCTTaGTGTTTCAGCCTCTGCTTC +
Preference number: 2 (lower is better)
Translates to: FECSRKLSYAWLEVRFWLSNLLS*CFSLCF
Trigger: GAAGCAGAGGCTGAAACAGCAAGACAAGAGATTGGA...CAGCCAAAACCTCACCTCAAGCCACGCATATGATAATTTTCTGGAACATTCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571319.5
3UTR-3UTR CCA 90 bp GCAGAAGCTCTATGTCTTCATGGTTTTCAGACCCAGGAGTATTCTCCATCAATATTCACAATCAGAGACTaGAAACTTGGACCACAGTTC +
Preference number: 2 (lower is better)
Translates to: AEALCLHGFQTQEYSPSIFTIRD*KLGPQF
Trigger: GAACTGTGGTCCAAGTTTCCAGTCTCTGATTGTGAA...TATTGATGGAGAATACTCCTGGGTCTGAAAACCATGAAGACATAGAGCTTCTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570965.5
3UTR-3UTR TCA 90 bp AAGCACTCAAAGTTTGCACCAAAGTTTACCAACATGGGTGTACTGCAGCAAGGAAGTTTAGAAATCAACTaGAATCAGGATGTAGGAGGA +
Preference number: 2 (lower is better)
Translates to: KHSKFAPKFTNMGVLQQGSLEIN*NQDVGG
Trigger: TCCTCCTACATCCTGATTTCAGTTGATTTCTAAACT...TCCTTGCTGCAGTACACCCATGTTGGTAAACTTTGGTGCAAACTTTGAGTGCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572405.5
3UTR-3UTR GCA 90 bp ATCAATATGGCGGACATCACTCGCACATTCATTTTCACCATATCCAATTCACTGATTATGTCACAGATGTaGATGAACTGGCCCCAATCT +
Preference number: 2 (lower is better)
Translates to: INMADITRTFIFTISNSLIMSQM*MNWPQS
Trigger: AGATTGGGGCCAGTTCATGCACATCTGTGACATAAT...CAGTGAATTGGATATGGTGAAAATGAATGTGCGAGTGATGTCCGCCATATTGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570965.5
3UTR-3UTR TCA 90 bp ACTTCTATCAGCATTAGTGGGTGTAAGAGAACAGTGAAGCAGTATCTTCAAAGGTTACTCAATGTTTGTTaGGTGGATGAAAATAGAGGC +
Preference number: 2 (lower is better)
Translates to: TSISISGCKRTVKQYLQRLLNVC*VDENRG
Trigger: GCCTCTATTTTCATCCACTCAACAAACATTGAGTAA...CCTTTGAAGATACTGCTTCACTGTTCTCTTACACCCACTAATGCTGATAGAAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572405.5
3UTR-3UTR CCA 90 bp TGTAAGAGAACAGTGAAGCAGTATCTTCAAAGGCCTAGAATTTTGTGCCTAGAATTAAGCTTCTTAACTTaGCAACAAAGGGACTTAGAA +
Preference number: 2 (lower is better)
Translates to: CKRTVKQYLQRPRILCLELSFLT*QQRDLE
Trigger: TTCTAAGTCCCTTTGTTGCCAAGTTAAGAAGCTTAA...TTCTAGGCACAAAATTCTAGGCCTTTGAAGATACTGCTTCACTGTTCTCTTACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572405.5
3UTR-3UTR GCA 90 bp AAGAGACAAATGAATCCAACTGGAAGTTTCATCGTCTTAAAGTTCCATAAGAAGGGACATTTTTGGATATaGAAGCACTCAAAGTTTGCA +
Preference number: 2 (lower is better)
Translates to: KRQMNPTGSFIVLKFHKKGHFWI*KHSKFA
Trigger: TGCAAACTTTGAGTGCTTGCATATCCAAAAATGTCC...CTTCTTATGGAACTTTAAGACGATGAAACTTCCAGTTGGATTCATTTGTCTCTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000572405.5
3UTR TCA 72 bp GGCATCCGGGGACTGGGACTTAGGTCGAGGAGATCTTaGGATGGGGCAGAAGGCTCACTGGTAGTATTGGTG +
Preference number: 3 (lower is better)
Translates to: GIRGLGLRSRRS*DGAEGSLVVLV
Trigger: CACCAATACTACCAGTGAGCCTTCTGCCCCATCTCAAGATCTCCTCGACCTAAGTCCCAGTCCCCGGATGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571319.5
3UTR GCA 72 bp GAGTTTCAAGGACCTCCTCGCCCAGACACATCCCATTaGTATACTGGGTTTGACTCAACCATTTGCCGGGAA +
Preference number: 3 (lower is better)
Translates to: EFQGPPRPDTSH*YTGFDSTICRE
Trigger: TTCCCGGCAAATGGTTGAGTCAAACCCAGTATAGCAATGGGATGTGTCTGGGCGAGGAGGTCCTTGAAACTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575333.5
3UTR TCA 72 bp TCCTCGCCCAGACACATCCCATTGCTATACTGGGTTTaGCTCAACCATTTGCCGGGAAGTAATCACATCTCC +
Preference number: 3 (lower is better)
Translates to: SSPRHIPLLYWV*LNHLPGSNHIS
Trigger: GGAGATGTGATTACTTCCCGGCAAATGGTTGAGTCAAACCCAGTATAGCAATGGGATGTGTCTGGGCGAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575333.5
3UTR-3UTR CAA 90 bp CAGGTCGAGGTATACTTCTTTGACTTCGCTTACATCCACACCTCCTGGGAAGCCCAGTTTTCCAATCTCTaGTCTTGCTGTTTCAGCCTC +
Preference number: 3 (lower is better)
Translates to: QVEVYFFDFAYIHTSWEAQFSNL*SCCFSL
Trigger: GAGGCTGAAACAGCAAGACAAGAGATTGGAAAACTG...GGCTTCCCAGGAGGTGTGGATGTAAGCGAAGTCAAAGAAGTATACCTCGACCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571319.5
3UTR-3UTR CAA 90 bp CAGGTCGAGGTATACTTCTTTGACTTCGCTTACATCCACACCTCCTGGGAAGCCATGTCTAATGGCAAGTaGTATCTGGGATTCAGTAGC +
Preference number: 3 (lower is better)
Translates to: QVEVYFFDFAYIHTSWEAMSNGK*YLGFSS
Trigger: GCTACTGAATCCCAGATACAACTTGCCATTAGACAT...GGCTTCCCAGGAGGTGTGGATGTAAGCGAAGTCAAAGAAGTATACCTCGACCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000570965.5
ENST00000571319.5
ENST00000572360.5
3UTR-3UTR CAA 90 bp TTGACTTCGCTTACATCCACACCTCCTGGGAAGCCCTGTGACCAAGTCTTAATGTTCCAATCTCTTGTCTaGCTGTTTCAGCCTCTGCTT +
Preference number: 3 (lower is better)
Translates to: LTSLTSTPPGKPCDQVLMFQSLV*LFQPLL
Trigger: AAGCAGAGGCTGAAACAGCAAGACAAGAGATTGGAA...CATTAAGACTTGGTCACAGGGCTTCCCAGGAGGTGTGGATGTAAGCGAAGTCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571319.5
3UTR-3UTR CAA 90 bp AGGTATACTTCTTTGACTTCGCTTACATCCACACCTCCTGGGAAGCCCTGTGACATGTCTAATGGCAAGTaGTATCTGGGATTCAGTAGC +
Preference number: 3 (lower is better)
Translates to: RYTSLTSLTSTPPGKPCDMSNGK*YLGFSS
Trigger: GCTACTGAATCCCAGATACAACTTGCCATTAGACAT...GTCACAGGGCTTCCCAGGAGGTGTGGATGTAAGCGAAGTCAAAGAAGTATACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000570965.5
ENST00000571319.5
ENST00000572360.5
3UTR-3UTR CAA 90 bp TCCAATCTGTTCTGGGACCAATGTAACAGTCGAGTTCTTTGGAGCAATTACAGAGAGCAGTCTCTTGTCTaGCTGTTTCAGCCTCTGCTT +
Preference number: 3 (lower is better)
Translates to: SNLFWDQCNSRVLWSNYREQSLV*LFQPLL
Trigger: AAGCAGAGGCTGAAACAGCAAGACAAGAGACTGCTC...TCTGTAATTGCTCCAAAGAACTCGACTGTTACATTGGTCCCAGAACAGATTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570965.5
3UTR-3UTR CAA 90 bp GTGCAGTTTTCCAATCTGTTCTGGGACCAATGTAACAGTCGAGTTCTTTGGAGCATGTCTAATGGCAAGTaGTATCTGGGATTCAGTAGC +
Preference number: 3 (lower is better)
Translates to: VQFSNLFWDQCNSRVLWSMSNGK*YLGFSS
Trigger: GCTACTGAATCCCAGATACAACTTGCCATTAGACAT...GCTCCAAAGAACTCGACTGTTACATTGGTCCCAGAACAGATTGGAAAACTGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570965.5
3UTR-3UTR CAA 90 bp GAGTATTCTCCATCAATATGGCGGACATCACTCGCACATTCATTTTCACCATATTCAGAGACTGGAAACTaGGACCACAGTTCTGCACAC +
Preference number: 3 (lower is better)
Translates to: EYSPSIWRTSLAHSFSPYSETGN*DHSSAH
Trigger: GTGTGCAGAACTGTGGTCCAAGTTTCCAGTCTCTGA...ATATGGTGAAAATGAATGTGCGAGTGATGTCCGCCATATTGATGGAGAATACTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570965.5
3UTR TCA 72 bp CATTTCACAACCACTCAGTTCATACCTTGTAATCCCTaGATTTCTCCGCTTGCATCAGAGATACTCCCTTAC +
Preference number: 3 (lower is better)
Translates to: HFTTTQFIPCNP*ISPLASEILPY
Trigger: GTAAGGGAGTATCTCTGATGCAAGCGGAGAAATTCAGGGATTACAAGGTATGAACTGAGTGGTTGTGAAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575333.5
3UTR GCA 72 bp CAGAGGACATTTTTGGATATGCAAGCACTCAAAGTTTaGACCAAAGTTTACCAACATGGGTGTACTGCAGCA +
Preference number: 3 (lower is better)
Translates to: QRTFLDMQALKV*TKVYQHGCTAA
Trigger: TGCTGCAGTACACCCATGTTGGTAAACTTTGGTGCAAACTTTGAGTGCTTGCATATCCAAAAATGTCCTCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000572405.5
3UTR CCA 72 bp CATGGTTTTCAGACCCAGGAGTATTCTCCATCAATATaGCGGACATCACTCGCACATTCATTTTCACCATAT +
Preference number: 3 (lower is better)
Translates to: HGFQTQEYSPSI*RTSLAHSFSPY
Trigger: ATATGGTGAAAATGAATGTGCGAGTGATGTCCGCCATATTGATGGAGAATACTCCTGGGTCTGAAAACCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000570965.5
ENST00000571319.5
3UTR CCA 72 bp ACTGAATTTGAATGTTCCAGAAAATTATCATATGCGTaGCTTGAGGTGAGGTTTTGGCTGGTCCTTTGGGCA +
Preference number: 3 (lower is better)
Translates to: TEFECSRKLSYA*LEVRFWLVLWA
Trigger: TGCCCAAAGGACCAGCCAAAACCTCACCTCAAGCCACGCATATGATAATTTTCTGGAACATTCAAATTCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571319.5
3UTR-3UTR CAA 90 bp CAGATGTTGGAGGATTTGATGAGATTTGAGCAGTCTCTTGTCTTGCTGTTTCAGTCGAGGTATACTTCTTaGACTTCGCTTACATCCACA +
Preference number: 3 (lower is better)
Translates to: QMLEDLMRFEQSLVLLFQSRYTS*TSLTST
Trigger: TGTGGATGTAAGCGAAGTCAAAGAAGTATACCTCGA...CTGAAACAGCAAGACAAGAGACTGCTCAAATCTCATCAAATCCTCCAACATCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570965.5
ENST00000572360.5
3UTR-3UTR CAA 90 bp TGTTCCAGAAAATTATCATATGCGTGGCTTGAGGTGAGGTTTTGGCTGGTCCTTTTGCTCCAAAATCCTTaGTTGGTTTCTAGTAAACCT +
Preference number: 3 (lower is better)
Translates to: CSRKLSYAWLEVRFWLVLLLQNP*LVSSKP
Trigger: AGGTTTACTAGAAACCAACAAAGGATTTTGGAGCAA...AAGGACCAGCCAAAACCTCACCTCAAGCCACGCATATGATAATTTTCTGGAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000571319.5
3UTR GCA 72 bp ACTCGCACATTCATTTTCACCATATCCAATTCACTGTaGAGTTTTCCAATCTGTTCTGGGACCAATGTAACA +
Preference number: 3 (lower is better)
Translates to: TRTFIFTISNSL*SFPICSGTNVT
Trigger: TGTTACATTGGTCCCAGAACAGATTGGAAAACTGCACAGTGAATTGGATATGGTGAAAATGAATGTGCGAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570965.5
3UTR CCA 72 bp TCTCCAAGGCTAGCAAGTTCATCTGTGGATGAAGACTaGGTTTTAAGTTGTTTGTTACATCAGAACTTGGAA +
Preference number: 3 (lower is better)
Translates to: SPRLASSSVDED*VLSCLLHQNLE
Trigger: TTCCAAGTTCTGATGTAACAAACAACTTAAAACCCAGTCTTCATCCACAGATGAACTTGCTAGCCTTGGAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571319.5
3UTR CCA 72 bp TTCTCTTTAACAAATTCCTTCTTCACAATCAGAGACTaGAAACTTGGACCACAGTTCTGCACACACATGTCA +
Preference number: 3 (lower is better)
Translates to: FSLTNSFFTIRD*KLGPQFCTHMS
Trigger: TGACATGTGTGTGCAGAACTGTGGTCCAAGTTTCCAGTCTCTGATTGTGAAGAAGGAATTTGTTAAAGAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570965.5
3UTR-3UTR CAA 90 bp TGTAAGAGAACAGTGAAGCAGTATCTTCAAAGGCCTAGAATTTTGTGCCTAGAACTTAAGCTTCTTAACTaGGCAACAAAGGGACTTAGA +
Preference number: 3 (lower is better)
Translates to: CKRTVKQYLQRPRILCLELKLLN*ATKGLR
Trigger: TCTAAGTCCCTTTGTTGCCAAGTTAAGAAGCTTAAG...TTCTAGGCACAAAATTCTAGGCCTTTGAAGATACTGCTTCACTGTTCTCTTACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572405.5
3UTR TCA 72 bp TATCCAAGGATAGCATTATTCAAATCCTCATTCACCTaGATTAGCTCAACAGTTACATCTTCGTTCTCCACC +
Preference number: 3 (lower is better)
Translates to: YPRIALFKSSFT*ISSTVTSSFST
Trigger: GGTGGAGAACGAAGATGTAACTGTTGAGCTAATTCAGGTGAATGAGGATTTGAATAATGCTATCCTTGGATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570965.5
ENST00000571319.5
3UTR TCA 72 bp TCTCTCCTTCTCCCCACCCATGATCCCACCATATACTaGACAAATTTATACTACAGTATCTATAATACTTCA +
Preference number: 3 (lower is better)
Translates to: SLLLPTHDPTIY*TNLYYSIYNTS
Trigger: TGAAGTATTATAGATACTGTAGTATAAATTTGTTCAGTATATGGTGGGATCATGGGTGGGGAGAAGGAGAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572405.5
CDS-3UTR CCA 90 bp CTCAACAGTTACATCTTCGTTCTCCACCACCACAAGCAGGTCCATGATCCTCTCGCGCTTCCCGGGCTCTaGCAGAGGCGGTGCGTTCTG +
Preference number: 4 (lower is better)
Translates to: LNSYIFVLHHHKQVHDPLALPGL*QRRCVL
Trigger: CAGAACGCACCGCCTCTGCCAGAGCCCGGGAAGCGC...GAGAGGATCATGGACCTGCTTGTGGTGGTGGAGAACGAAGATGTAACTGTTGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570965.5
CDS-3UTR TCA 90 bp CAGGTCGAGGTATACTTCTTTGACTTCGCTTACATCCACACCTCCTGGGAAGCCGTTGAGTCTGAGCTATaGGGTGGCCCACGGAGGTCG +
Preference number: 4 (lower is better)
Translates to: QVEVYFFDFAYIHTSWEAVESEL*GGPRRS
Trigger: CGACCTCCGTGGGCCACCTCATAGCTCAGACTCAAC...GGCTTCCCAGGAGGTGTGGATGTAAGCGAAGTCAAAGAAGTATACCTCGACCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570965.5
CDS-3UTR GCA 90 bp AAGGAGAACTGTTTAACATCAAGCTCTTCTGCTGGTCTGAAAAGACCTGAGTGTAGAGGCGGTGCGTTCTaGGCTGCCGCTGCGGGGCGC +
Preference number: 4 (lower is better)
Translates to: KENCLTSSSSAGLKRPECRGGAF*AAAAGR
Trigger: GCGCCCCGCAGCGGCAGCGCAGAACGCACCGCCTCT...ACACTCAGGTCTTTTCAGACCAGCAGAAGAGCTTGATGTTAAACAGTTCTCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570371.5
CDS-3UTR GCA 90 bp AAGGAGAACTGTTTAACATCAAGCTCTTCTGCTGGTCTGAAAAGACCTGAGTGTGCGAGGAGGCTGCGCTaGCGGCTGCAGGTGGTACAG +
Preference number: 4 (lower is better)
Translates to: KENCLTSSSSAGLKRPECARRLR*RLQVVQ
Trigger: CTGTACCACCTGCAGCCGGCAGCGCAGCCTCCTCGC...ACACTCAGGTCTTTTCAGACCAGCAGAAGAGCTTGATGTTAAACAGTTCTCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570371.5
CDS-3UTR GCA 90 bp CACGTAATTAAGGAGAACTGTTTAACATCAAGCTCTTCTGCTGGTCTGAAAAGAGACCCGCGAGGAGGCTaGGCTGCCGGCTGCAGGTGG +
Preference number: 4 (lower is better)
Translates to: HVIKENCLTSSSSAGLKRDPRGG*AAGCRW
Trigger: CCACCTGCAGCCGGCAGCGCAGCCTCCTCGCGGGTC...TCTTTTCAGACCAGCAGAAGAGCTTGATGTTAAACAGTTCTCCTTAATTACGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570371.5
CDS-3UTR TCA 90 bp AGCTCAACAGTTACATCTTCGTTCTCCACCACCACAAGCAGGTCCATGATCCTCAGGTCGAGGAGATCTTaGGATGGGGCAGAAGGCTCA +
Preference number: 4 (lower is better)
Translates to: SSTVTSSFSTTTSRSMILRSRRS*DGAEGS
Trigger: TGAGCCTTCTGCCCCATCTCAAGATCTCCTCGACCT...GAGGATCATGGACCTGCTTGTGGTGGTGGAGAACGAAGATGTAACTGTTGAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571319.5
CDS-3UTR TCA 90 bp TCATGCAGGTCTAAATGCCCTGTCTACTTGTTCCTCTATAGCTCGAGCATTGCCAGCAAATGTAGCCTATaGGGTGGCCCACGGAGGTCG +
Preference number: 4 (lower is better)
Translates to: SCRSKCPVYLFLYSSSIASKCSL*GGPRRS
Trigger: CGACCTCCGTGGGCCACCTCATAGGCTACATTTGCT...GGCAATGCTCGAGCTATAGAGGAACAAGTAGACAGGGCATTTAGACCTGCATGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572405.5
CDS-3UTR TCA 90 bp TTGCCTGTTAGTAAATGGGTCATAAATATGGCCTATGAGCCGGGCACAGTGGCTCGTAGGTCAGGAGTTTaGGACCACAGCCTGGCCAAC +
Preference number: 4 (lower is better)
Translates to: LPVSKWVINMAYEPGTVARRSGV*DHSLAN
Trigger: GTTGGCCAGGCTGTGGTCTCAAACTCCTGACCTACG...AGCCACTGTGCCCGGCTCATAGGCCATATTTATGACCCATTTACTAACAGGCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576932.5
CDS-3UTR GCA 90 bp CACGTAATTAAGGAGAACTGTTTAACATCAAGCTCTTCTGCTGGTCTGAAAAGACGGGTGTATGGAGCCTaGGAGAGTGGCGCGGCCGCC +
Preference number: 4 (lower is better)
Translates to: HVIKENCLTSSSSAGLKRRVYGA*ESGAAA
Trigger: GGCGGCCGCGCCACTCTCGCAGGCTCCATACACCCG...TCTTTTCAGACCAGCAGAAGAGCTTGATGTTAAACAGTTCTCCTTAATTACGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570371.5
CDS-3UTR CCA 90 bp ATTAAGGAGAACTGTTTAACATCAAGCTCTTCTGCTGGTCTGAAAAGACCTGAGGCGCTTCCCGGGCTCTaGCAGAGGCGGTGCGTTCTG +
Preference number: 4 (lower is better)
Translates to: IKENCLTSSSSAGLKRPEALPGL*QRRCVL
Trigger: CAGAACGCACCGCCTCTGCCAGAGCCCGGGAAGCGC...CTCAGGTCTTTTCAGACCAGCAGAAGAGCTTGATGTTAAACAGTTCTCCTTAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570371.5
CDS-3UTR TCA 90 bp CAGGTCGAGGTATACTTCTTTGACTTCGCTTACATCCACACCTCCTGGGAAGCCTCTGAGGGAGGAAACTaGACGCCTTTCTTAACCAGG +
Preference number: 4 (lower is better)
Translates to: QVEVYFFDFAYIHTSWEASEGGN*TPFLTR
Trigger: CCTGGTTAAGAAAGGCGTTCAGTTTCCTCCCTCAGA...GGCTTCCCAGGAGGTGTGGATGTAAGCGAAGTCAAAGAAGTATACCTCGACCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000570965.5
ENST00000571319.5
ENST00000572360.5
CDS-3UTR TCA 90 bp TTGCCTGTTAGTAAATGGGTCATAAATATGGCCTATGAGCCGGGCACAGTGGCTAGGTCGAGGAGATCTTaGGATGGGGCAGAAGGCTCA +
Preference number: 4 (lower is better)
Translates to: LPVSKWVINMAYEPGTVARSRRS*DGAEGS
Trigger: TGAGCCTTCTGCCCCATCTCAAGATCTCCTCGACCT...AGCCACTGTGCCCGGCTCATAGGCCATATTTATGACCCATTTACTAACAGGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576932.5
CDS-3UTR TCA 90 bp TTGCCTGTTAGTAAATGGGTCATAAATATGGCCTATGAGCCGGGCACAGTGGCTCATGTCAATAAGCTATaGGGTGGCCCACGGAGGTCG +
Preference number: 4 (lower is better)
Translates to: LPVSKWVINMAYEPGTVAHVNKL*GGPRRS
Trigger: CGACCTCCGTGGGCCACCTCATAGCTTATTGACATG...AGCCACTGTGCCCGGCTCATAGGCCATATTTATGACCCATTTACTAACAGGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576932.5
CDS-3UTR GCA 90 bp GTATTTAATCACGTAATTAAGGAGAACTGTTTAACATCAAGCTCTTCTGCTGGTACCTGCAGCGCGCCCTaGGGGACCCGCGAGGAGGCT +
Preference number: 4 (lower is better)
Translates to: VFNHVIKENCLTSSSSAGTCSAP*GTREEA
Trigger: AGCCTCCTCGCGGGTCCCGCAGGGCGCGCTGCAGGT...ACCAGCAGAAGAGCTTGATGTTAAACAGTTCTCCTTAATTACGTGATTAAATAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570371.5
CDS-3UTR CCA 90 bp GTGGTATTTAATCACGTAATTAAGGAGAACTGTTTAACATCAAGCTCTTCTGCTTGGAGCCTGCGAGAGTaGCGCGGCCGCCCGCTCGGA +
Preference number: 4 (lower is better)
Translates to: VVFNHVIKENCLTSSSSAWSLRE*RGRPLG
Trigger: TCCGAGCGGGCGGCCGCGCCACTCTCGCAGGCTCCA...AGCAGAAGAGCTTGATGTTAAACAGTTCTCCTTAATTACGTGATTAAATACCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570371.5
CDS-3UTR CCA 90 bp TTGCCTGTTAGTAAATGGGTCATAAATATGGCCTATGAGCCGGGCACAGTGGCTTTCAGGAAGCCGAGGTaGGCAGATCACCGTAGGTCA +
Preference number: 4 (lower is better)
Translates to: LPVSKWVINMAYEPGTVAFRKPR*ADHRRS
Trigger: TGACCTACGGTGATCTGCCCACCTCGGCTTCCTGAA...AGCCACTGTGCCCGGCTCATAGGCCATATTTATGACCCATTTACTAACAGGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576932.5
CDS-3UTR TCA 90 bp GGGGCAGAAGGCTCACTGGTAGTATTGGTGGCTTCCTTCTGGTTCTTATTTTGCTCTGAGGGAGGAAACTaGACGCCTTTCTTAACCAGG +
Preference number: 4 (lower is better)
Translates to: GAEGSLVVLVASFWFLFCSEGGN*TPFLTR
Trigger: CCTGGTTAAGAAAGGCGTTCAGTTTCCTCCCTCAGA...GCAAAATAAGAACCAGAAGGAAGCCACCAATACTACCAGTGAGCCTTCTGCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571319.5
CDS-3UTR TCA 90 bp AGGTATACTTCTTTGACTTCGCTTACATCCACACCTCCTGGGAAGCCCTGTGACGATTATTCATGGTGTTaGGTTCTCCCAGAGTGGCCC +
Preference number: 4 (lower is better)
Translates to: RYTSLTSLTSTPPGKPCDDYSWC*VLPEWP
Trigger: GGGCCACTCTGGGAGAACTCAACACCATGAATAATC...GTCACAGGGCTTCCCAGGAGGTGTGGATGTAAGCGAAGTCAAAGAAGTATACCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571319.5
CDS-3UTR TCA 90 bp TTGCCTGTTAGTAAATGGGTCATAAATATGGCCTATGAGCCGGGCACAGTGGCTATGCGTGGCTTGAGGTaGGGTTTTGGCTGGTCCTTT +
Preference number: 4 (lower is better)
Translates to: LPVSKWVINMAYEPGTVAMRGLR*GFGWSF
Trigger: AAAGGACCAGCCAAAACCTCACCTCAAGCCACGCAT...AGCCACTGTGCCCGGCTCATAGGCCATATTTATGACCCATTTACTAACAGGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576932.5
CDS-3UTR TCA 90 bp CTCAACAGTTACATCTTCGTTCTCCACCACCACAAGCAGGTCCATGATCCTCTCATCATATGCGTGGCTTaGGGTGAGGTTTTGGCTGGT +
Preference number: 4 (lower is better)
Translates to: LNSYIFVLHHHKQVHDPLIICVA*GEVLAG
Trigger: ACCAGCCAAAACCTCACCTCAAGCCACGCATATGAT...GAGAGGATCATGGACCTGCTTGTGGTGGTGGAGAACGAAGATGTAACTGTTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571319.5
CDS-3UTR TCA 90 bp ACGGGGGTATCTCTGTATTCTCCAAGGCTAGCAAGTTCATCTGTGGATGAAGACTTTGTCATCGCTGGATaGTTGCTGGGCAAAGGTGGC +
Preference number: 4 (lower is better)
Translates to: TGVSLYSPRLASSSVDEDFVIAG*LLGKGG
Trigger: GCCACCTTTGCCCAGCAATCATCCAGCGATGACAAA...GTCTTCATCCACAGATGAACTTGCTAGCCTTGGAGAATACAGAGATACCCCCGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000571319.5
CDS-3UTR GCA 90 bp TCGCTTACATCCACACCTCCTGGGAAGCCCTGTGACCAAGTCTTAATGAAATTCTCATCGCTGGATGATTaGTGGGCAAAGGTGGCAGAC +
Preference number: 4 (lower is better)
Translates to: SLTSTPPGKPCDQVLMKFSSLDD*WAKVAD
Trigger: GTCTGCCACCTTTGCCCAGCAATCATCCAGCGATGA...GAATTTCATTAAGACTTGGTCACAGGGCTTCCCAGGAGGTGTGGATGTAAGCGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571319.5
CDS-3UTR CCA 90 bp TTGCCTGTTAGTAAATGGGTCATAAATATGGCCTATGAGCCGGGCACAGTGGCTGAGGAGATCTTGAGATaGGGCAGAAGGCTCACTGGT +
Preference number: 4 (lower is better)
Translates to: LPVSKWVINMAYEPGTVAEEILR*GRRLTG
Trigger: ACCAGTGAGCCTTCTGCCCCATCTCAAGATCTCCTC...AGCCACTGTGCCCGGCTCATAGGCCATATTTATGACCCATTTACTAACAGGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576932.5
CDS-3UTR CCA 90 bp ACGGGGGTATCTCTGTATTCTCCAAGGCTAGCAAGTTCATCTGTGGATGAAGACTCGCTGGATGATTGCTaGGCAAAGGTGGCAGACTCT +
Preference number: 4 (lower is better)
Translates to: TGVSLYSPRLASSSVDEDSLDDC*AKVADS
Trigger: AGAGTCTGCCACCTTTGCCCAGCAATCATCCAGCGA...GTCTTCATCCACAGATGAACTTGCTAGCCTTGGAGAATACAGAGATACCCCCGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000571319.5
CDS-3UTR CCA 90 bp TTTAATCACGTAATTAAGGAGAACTGTTTAACATCAAGCTCTTCTGCTGGTCTGGCTGCCGGCTGCAGGTaGTACAGGCGGGTAGTGGCG +
Preference number: 4 (lower is better)
Translates to: FNHVIKENCLTSSSSAGLAAGCR*YRRVVA
Trigger: CGCCACTACCCGCCTGTACCACCTGCAGCCGGCAGC...CAGACCAGCAGAAGAGCTTGATGTTAAACAGTTCTCCTTAATTACGTGATTAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570371.5
CDS-3UTR TCA 90 bp TTGCCTGTTAGTAAATGGGTCATAAATATGGCCTATGAGCCGGGCACAGTGGCTTCTGAGGGAGGAAACTaGACGCCTTTCTTAACCAGG +
Preference number: 4 (lower is better)
Translates to: LPVSKWVINMAYEPGTVASEGGN*TPFLTR
Trigger: CCTGGTTAAGAAAGGCGTTCAGTTTCCTCCCTCAGA...AGCCACTGTGCCCGGCTCATAGGCCATATTTATGACCCATTTACTAACAGGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576932.5
CDS-3UTR TCA 90 bp TCCCATTGCTATACTGGGTTTGACTCAACCATTTGCCGGGAAGTAATCACATCTAGGTCGAGGAGATCTTaGGATGGGGCAGAAGGCTCA +
Preference number: 4 (lower is better)
Translates to: SHCYTGFDSTICREVITSRSRRS*DGAEGS
Trigger: TGAGCCTTCTGCCCCATCTCAAGATCTCCTCGACCT...AGATGTGATTACTTCCCGGCAAATGGTTGAGTCAAACCCAGTATAGCAATGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575333.5
CDS-3UTR TCA 90 bp TTGCCTGTTAGTAAATGGGTCATAAATATGGCCTATGAGCCGGGCACAGTGGCTGATTATTCATGGTGTTaGGTTCTCCCAGAGTGGCCC +
Preference number: 4 (lower is better)
Translates to: LPVSKWVINMAYEPGTVADYSWC*VLPEWP
Trigger: GGGCCACTCTGGGAGAACTCAACACCATGAATAATC...AGCCACTGTGCCCGGCTCATAGGCCATATTTATGACCCATTTACTAACAGGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576932.5
CDS-3UTR TCA 90 bp TTGCCTGTTAGTAAATGGGTCATAAATATGGCCTATGAGCCGGGCACAGTGGCTATCATATGCGTGGCTTaGGGTGAGGTTTTGGCTGGT +
Preference number: 4 (lower is better)
Translates to: LPVSKWVINMAYEPGTVAIICVA*GEVLAG
Trigger: ACCAGCCAAAACCTCACCTCAAGCCACGCATATGAT...AGCCACTGTGCCCGGCTCATAGGCCATATTTATGACCCATTTACTAACAGGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576932.5
CDS-3UTR TCA 90 bp ATTAGCTCAACAGTTACATCTTCGTTCTCCACCACCACAAGCAGGTCCATGATCTGGCAGACTCTGGTTTaGTGGTGCTGCTGCAATGGT +
Preference number: 4 (lower is better)
Translates to: ISSTVTSSFSTTTSRSMIWQTLV*WCCCNG
Trigger: ACCATTGCAGCAGCACCATCAAACCAGAGTCTGCCA...GATCATGGACCTGCTTGTGGTGGTGGAGAACGAAGATGTAACTGTTGAGCTAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571319.5
CDS-3UTR TCA 90 bp GTGAGACTCTCAAAAGTTAGGTGGCTGAGAGGTGGCAGAACTGGCATTTCAACTCCCCAATCTTCAGTCTaGACTCCAGCAAATGTAGCC +
Preference number: 4 (lower is better)
Translates to: VRLSKVRWLRGGRTGISTPQSSV*TPANVA
Trigger: GGCTACATTTGCTGGAGTTCAGACTGAAGATTGGGG...AGTTGAAATGCCAGTTCTGCCACCTCTCAGCCACCTAACTTTTGAGAGTCTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000575333.5
CDS-3UTR GCA 90 bp TTGACTTCGCTTACATCCACACCTCCTGGGAAGCCCTGTGACCAAGTCTTAATGTCCATGATCCTCTCCTaGATCTCCCGACCTGTTTTA +
Preference number: 4 (lower is better)
Translates to: LTSLTSTPPGKPCDQVLMSMILS*ISRPVL
Trigger: TAAAACAGGTCGGGAGATGCAGGAGAGGATCATGGA...CATTAAGACTTGGTCACAGGGCTTCCCAGGAGGTGTGGATGTAAGCGAAGTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570965.5
ENST00000571319.5
CDS-3UTR GCA 90 bp GTGGTATTTAATCACGTAATTAAGGAGAACTGTTTAACATCAAGCTCTTCTGCTGGGCTTTTCGCCCCGTaGAGGAGGAGCAGGCAGCCC +
Preference number: 4 (lower is better)
Translates to: VVFNHVIKENCLTSSSSAGLFAP*RRSRQP
Trigger: GGGCTGCCTGCTCCTCCTGCACGGGGCGAAAAGCCC...AGCAGAAGAGCTTGATGTTAAACAGTTCTCCTTAATTACGTGATTAAATACCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570371.5
CDS-3UTR GCA 90 bp GTGGTATTTAATCACGTAATTAAGGAGAACTGTTTAACATCAAGCTCTTCTGCTGGCTGCGCTGCCGGCTaGAGGTGGTACAGGCGGGTA +
Preference number: 4 (lower is better)
Translates to: VVFNHVIKENCLTSSSSAGCAAG*RWYRRV
Trigger: TACCCGCCTGTACCACCTGCAGCCGGCAGCGCAGCC...AGCAGAAGAGCTTGATGTTAAACAGTTCTCCTTAATTACGTGATTAAATACCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570371.5
CDS-3UTR CCA 90 bp TTGCCTGTTAGTAAATGGGTCATAAATATGGCCTATGAGCCGGGCACAGTGGCTCTTGAGGTGAGGTTTTaGCTGGTCCTTTGGGCAAAC +
Preference number: 4 (lower is better)
Translates to: LPVSKWVINMAYEPGTVALEVRF*LVLWAN
Trigger: GTTTGCCCAAAGGACCAGCCAAAACCTCACCTCAAG...AGCCACTGTGCCCGGCTCATAGGCCATATTTATGACCCATTTACTAACAGGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576932.5
CDS-3UTR CCA 90 bp TTTAATCACGTAATTAAGGAGAACTGTTTAACATCAAGCTCTTCTGCTGGTCTGCGCTCGGATCCCAGGTaGGCTTTTCGCCCCGTGCAG +
Preference number: 4 (lower is better)
Translates to: FNHVIKENCLTSSSSAGLRSDPR*AFRPVQ
Trigger: CTGCACGGGGCGAAAAGCCCACCTGGGATCCGAGCG...CAGACCAGCAGAAGAGCTTGATGTTAAACAGTTCTCCTTAATTACGTGATTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570371.5
CDS-3UTR TCA 90 bp AGGTATACTTCTTTGACTTCGCTTACATCCACACCTCCTGGGAAGCCCTGTGACCGAGGTATACTTCTTTaGCTTCGCTTACATCCACAC +
Preference number: 4 (lower is better)
Translates to: RYTSLTSLTSTPPGKPCDRGILL*LRLHPH
Trigger: GTGTGGATGTAAGCGAAGTCAAAGAAGTATACCTCG...GTCACAGGGCTTCCCAGGAGGTGTGGATGTAAGCGAAGTCAAAGAAGTATACCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000570965.5
ENST00000571319.5
ENST00000572360.5
CDS-3UTR GCA 90 bp TCGCTTACATCCACACCTCCTGGGAAGCCCTGTGACCAAGTCTTAATGAAATTCAGAAGAAAGAGCTGGTaGAGTAGGGACAGATGTTGG +
Preference number: 4 (lower is better)
Translates to: SLTSTPPGKPCDQVLMKFRRKSW*SRDRCW
Trigger: CCAACATCTGTCCCTACTGCACCAGCTCTTTCTTCT...GAATTTCATTAAGACTTGGTCACAGGGCTTCCCAGGAGGTGTGGATGTAAGCGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570965.5
ENST00000572360.5
CDS-3UTR GCA 90 bp TTGCCTGTTAGTAAATGGGTCATAAATATGGCCTATGAGCCGGGCACAGTGGCTAGAAGAAAGAGCTGGTaGAGTAGGGACAGATGTTGG +
Preference number: 4 (lower is better)
Translates to: LPVSKWVINMAYEPGTVARRKSW*SRDRCW
Trigger: CCAACATCTGTCCCTACTGCACCAGCTCTTTCTTCT...AGCCACTGTGCCCGGCTCATAGGCCATATTTATGACCCATTTACTAACAGGCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576932.5
CDS-3UTR GCA 90 bp ACTTCGCTTACATCCACACCTCCTGGGAAGCCCTGTGACCAAGTCTTAATGAAATCCATGATCCTCTCCTaGATCTCCCGACCTGTTTTA +
Preference number: 4 (lower is better)
Translates to: TSLTSTPPGKPCDQVLMKSMILS*ISRPVL
Trigger: TAAAACAGGTCGGGAGATGCAGGAGAGGATCATGGA...TTTCATTAAGACTTGGTCACAGGGCTTCCCAGGAGGTGTGGATGTAAGCGAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570965.5
ENST00000571319.5
CDS-3UTR GCA 90 bp GTGAGACTCTCAAAAGTTAGGTGGCTGAGAGGTGGCAGAACTGGCATTTCAACTTCCATGATCCTCTCCTaGATCTCCCGACCTGTTTTA +
Preference number: 4 (lower is better)
Translates to: VRLSKVRWLRGGRTGISTSMILS*ISRPVL
Trigger: TAAAACAGGTCGGGAGATGCAGGAGAGGATCATGGA...AGTTGAAATGCCAGTTCTGCCACCTCTCAGCCACCTAACTTTTGAGAGTCTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000575333.5
CDS-3UTR GCA 90 bp TTGCCTGTTAGTAAATGGGTCATAAATATGGCCTATGAGCCGGGCACAGTGGCTTCCATGATCCTCTCCTaGATCTCCCGACCTGTTTTA +
Preference number: 4 (lower is better)
Translates to: LPVSKWVINMAYEPGTVASMILS*ISRPVL
Trigger: TAAAACAGGTCGGGAGATGCAGGAGAGGATCATGGA...AGCCACTGTGCCCGGCTCATAGGCCATATTTATGACCCATTTACTAACAGGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576932.5
CDS-3UTR GCA 90 bp AGGTATACTTCTTTGACTTCGCTTACATCCACACCTCCTGGGAAGCCCTGTGACTCCAATCTCTTGTCTTaGTGTTTCAGCCTCTGCTTC +
Preference number: 4 (lower is better)
Translates to: RYTSLTSLTSTPPGKPCDSNLLS*CFSLCF
Trigger: GAAGCAGAGGCTGAAACAGCAAGACAAGAGATTGGA...GTCACAGGGCTTCCCAGGAGGTGTGGATGTAAGCGAAGTCAAAGAAGTATACCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571319.5
CDS-3UTR GCA 90 bp AATCACGTAATTAAGGAGAACTGTTTAACATCAAGCTCTTCTGCTGGTCTGAAACAGCCAGCAGGAGCCTaGCAGAGAGTGAGGTGTCCC +
Preference number: 4 (lower is better)
Translates to: NHVIKENCLTSSSSAGLKQPAGA*QRVRCP
Trigger: GGGACACCTCACTCTCTGGCAGGCTCCTGCTGGCTG...TTTCAGACCAGCAGAAGAGCTTGATGTTAAACAGTTCTCCTTAATTACGTGATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570371.5
CDS-3UTR GCA 90 bp AAGGAGAACTGTTTAACATCAAGCTCTTCTGCTGGTCTGAAAAGACCTGAGTGTGGGAGGTGTGCGCCCTaGCCTTTAAAGTTGTGGTCA +
Preference number: 4 (lower is better)
Translates to: KENCLTSSSSAGLKRPECGRCAP*PLKLWS
Trigger: TGACCACAACTTTAAAGGGCAGGGCGCACACCTCCC...ACACTCAGGTCTTTTCAGACCAGCAGAAGAGCTTGATGTTAAACAGTTCTCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570371.5
CDS-3UTR CCA 90 bp TCGCTTACATCCACACCTCCTGGGAAGCCCTGTGACCAAGTCTTAATGAAATTCCAGAGACTGGAAACTTaGACCACAGTTCTGCACACA +
Preference number: 4 (lower is better)
Translates to: SLTSTPPGKPCDQVLMKFQRLET*TTVLHT
Trigger: TGTGTGCAGAACTGTGGTCCAAGTTTCCAGTCTCTG...GAATTTCATTAAGACTTGGTCACAGGGCTTCCCAGGAGGTGTGGATGTAAGCGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000570965.5
ENST00000571319.5
ENST00000572360.5
CDS-3UTR CCA 90 bp TTCTTAACCAGGTCGAGGTATACTTCTTTGACTTCGCTTACATCCACACCTCCTGAGGAGATCTTGAGATaGGGCAGAAGGCTCACTGGT +
Preference number: 4 (lower is better)
Translates to: FLTRSRYTSLTSLTSTPPEEILR*GRRLTG
Trigger: ACCAGTGAGCCTTCTGCCCCATCTCAAGATCTCCTC...AGGAGGTGTGGATGTAAGCGAAGTCAAAGAAGTATACCTCGACCTGGTTAAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571319.5
CDS-3UTR CCA 90 bp ATTAGCTCAACAGTTACATCTTCGTTCTCCACCACCACAAGCAGGTCCATGATCCTTGAGGTGAGGTTTTaGCTGGTCCTTTGGGCAAAC +
Preference number: 4 (lower is better)
Translates to: ISSTVTSSFSTTTSRSMILEVRF*LVLWAN
Trigger: GTTTGCCCAAAGGACCAGCCAAAACCTCACCTCAAG...GATCATGGACCTGCTTGTGGTGGTGGAGAACGAAGATGTAACTGTTGAGCTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571319.5
CDS-3UTR CCA 90 bp TTTAATCACGTAATTAAGGAGAACTGTTTAACATCAAGCTCTTCTGCTGGTCTGGTAGTGGCGGGTGTATaGAGCCTGCGAGAGTGGCGC +
Preference number: 4 (lower is better)
Translates to: FNHVIKENCLTSSSSAGLVVAGV*SLREWR
Trigger: GCGCCACTCTCGCAGGCTCCATACACCCGCCACTAC...CAGACCAGCAGAAGAGCTTGATGTTAAACAGTTCTCCTTAATTACGTGATTAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570371.5
CDS-3UTR TCA 90 bp CCAGACACATCCCATTGCTATACTGGGTTTGACTCAACCATTTGCCGGGAAGTACGAGGTATACTTCTTTaGCTTCGCTTACATCCACAC +
Preference number: 4 (lower is better)
Translates to: PDTSHCYTGFDSTICREVRGILL*LRLHPH
Trigger: GTGTGGATGTAAGCGAAGTCAAAGAAGTATACCTCG...TACTTCCCGGCAAATGGTTGAGTCAAACCCAGTATAGCAATGGGATGTGTCTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575333.5
CDS-3UTR TCA 90 bp TTGCCTGTTAGTAAATGGGTCATAAATATGGCCTATGAGCCGGGCACAGTGGCTCGAGGTATACTTCTTTaGCTTCGCTTACATCCACAC +
Preference number: 4 (lower is better)
Translates to: LPVSKWVINMAYEPGTVARGILL*LRLHPH
Trigger: GTGTGGATGTAAGCGAAGTCAAAGAAGTATACCTCG...AGCCACTGTGCCCGGCTCATAGGCCATATTTATGACCCATTTACTAACAGGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576932.5
CDS-3UTR TCA 90 bp ATTAAGGAGAACTGTTTAACATCAAGCTCTTCTGCTGGTCTGAAAAGACCTGAGAGGTCGAGGAGATCTTaGGATGGGGCAGAAGGCTCA +
Preference number: 4 (lower is better)
Translates to: IKENCLTSSSSAGLKRPERSRRS*DGAEGS
Trigger: TGAGCCTTCTGCCCCATCTCAAGATCTCCTCGACCT...CTCAGGTCTTTTCAGACCAGCAGAAGAGCTTGATGTTAAACAGTTCTCCTTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000570371.5
ENST00000575333.5
CDS-3UTR TCA 90 bp CTGAACGCCTTTCTTAACCAGGTCGAGGTATACTTCTTTGACTTCGCTTACATCCCCCAATCTTCAGTCTaGACTCCAGCAAATGTAGCC +
Preference number: 4 (lower is better)
Translates to: LNAFLNQVEVYFFDFAYIPQSSV*TPANVA
Trigger: GGCTACATTTGCTGGAGTTCAGACTGAAGATTGGGG...GATGTAAGCGAAGTCAAAGAAGTATACCTCGACCTGGTTAAGAAAGGCGTTCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000570965.5
ENST00000571319.5
ENST00000572360.5
CDS-3UTR TCA 90 bp TCATGCAGGTCTAAATGCCCTGTCTACTTGTTCCTCTATAGCTCGAGCATTGCCGGTGTAAGAGAACAGTaGAGCAGTATCTTCAAAGGC +
Preference number: 4 (lower is better)
Translates to: SCRSKCPVYLFLYSSSIAGVREQ*SSIFKG
Trigger: GCCTTTGAAGATACTGCTTCACTGTTCTCTTACACC...GGCAATGCTCGAGCTATAGAGGAACAAGTAGACAGGGCATTTAGACCTGCATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572405.5
CDS-3UTR GCA 90 bp AGGTATACTTCTTTGACTTCGCTTACATCCACACCTCCTGGGAAGCCCTGTGACATTATGTCACAGATGTaGATGAACTGGCCCCAATCT +
Preference number: 4 (lower is better)
Translates to: RYTSLTSLTSTPPGKPCDIMSQM*MNWPQS
Trigger: AGATTGGGGCCAGTTCATGCACATCTGTGACATAAT...GTCACAGGGCTTCCCAGGAGGTGTGGATGTAAGCGAAGTCAAAGAAGTATACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000570965.5
ENST00000571319.5
ENST00000572360.5
CDS-3UTR GCA 90 bp CCAGACACATCCCATTGCTATACTGGGTTTGACTCAACCATTTGCCGGGAAGTACTTCAAAGCTTTCACTaGATCTTTTGGCCCATCCTG +
Preference number: 4 (lower is better)
Translates to: PDTSHCYTGFDSTICREVLQSFH*IFWPIL
Trigger: CAGGATGGGCCAAAAGATGCAGTGAAAGCTTTGAAG...TACTTCCCGGCAAATGGTTGAGTCAAACCCAGTATAGCAATGGGATGTGTCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575333.5
CDS-3UTR CCA 90 bp GTGCAGTTTTCCAATCTGTTCTGGGACCAATGTAACAGTCGAGTTCTTTGGAGCCAGAGACTGGAAACTTaGACCACAGTTCTGCACACA +
Preference number: 4 (lower is better)
Translates to: VQFSNLFWDQCNSRVLWSQRLET*TTVLHT
Trigger: TGTGTGCAGAACTGTGGTCCAAGTTTCCAGTCTCTG...GCTCCAAAGAACTCGACTGTTACATTGGTCCCAGAACAGATTGGAAAACTGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570965.5
CDS-3UTR CCA 90 bp AGCTCAACAGTTACATCTTCGTTCTCCACCACCACAAGCAGGTCCATGATCCTCTTCACAATCAGAGACTaGAAACTTGGACCACAGTTC +
Preference number: 4 (lower is better)
Translates to: SSTVTSSFSTTTSRSMILFTIRD*KLGPQF
Trigger: GAACTGTGGTCCAAGTTTCCAGTCTCTGATTGTGAA...GAGGATCATGGACCTGCTTGTGGTGGTGGAGAACGAAGATGTAACTGTTGAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570965.5
ENST00000571319.5
CDS-3UTR CCA 90 bp AGGTATACTTCTTTGACTTCGCTTACATCCACACCTCCTGGGAAGCCCTGTGACTTCACAATCAGAGACTaGAAACTTGGACCACAGTTC +
Preference number: 4 (lower is better)
Translates to: RYTSLTSLTSTPPGKPCDFTIRD*KLGPQF
Trigger: GAACTGTGGTCCAAGTTTCCAGTCTCTGATTGTGAA...GTCACAGGGCTTCCCAGGAGGTGTGGATGTAAGCGAAGTCAAAGAAGTATACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000570965.5
ENST00000571319.5
ENST00000572360.5
CDS-3UTR CCA 90 bp TTGACTTCGCTTACATCCACACCTCCTGGGAAGCCCTGTGACCAAGTCTTAATGTTCACAATCAGAGACTaGAAACTTGGACCACAGTTC +
Preference number: 4 (lower is better)
Translates to: LTSLTSTPPGKPCDQVLMFTIRD*KLGPQF
Trigger: GAACTGTGGTCCAAGTTTCCAGTCTCTGATTGTGAA...CATTAAGACTTGGTCACAGGGCTTCCCAGGAGGTGTGGATGTAAGCGAAGTCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000570965.5
ENST00000571319.5
ENST00000572360.5
CDS-3UTR CCA 90 bp ACTTCGCTTACATCCACACCTCCTGGGAAGCCCTGTGACCAAGTCTTAATGAAATACAGAAGAAAGAGCTaGTGCAGTAGGGACAGATGT +
Preference number: 4 (lower is better)
Translates to: TSLTSTPPGKPCDQVLMKYRRKS*CSRDRC
Trigger: ACATCTGTCCCTACTGCACCAGCTCTTTCTTCTGTA...TTTCATTAAGACTTGGTCACAGGGCTTCCCAGGAGGTGTGGATGTAAGCGAAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570965.5
ENST00000572360.5
CDS-3UTR CCA 90 bp TTGCCTGTTAGTAAATGGGTCATAAATATGGCCTATGAGCCGGGCACAGTGGCTTACAGAAGAAAGAGCTaGTGCAGTAGGGACAGATGT +
Preference number: 4 (lower is better)
Translates to: LPVSKWVINMAYEPGTVAYRRKS*CSRDRC
Trigger: ACATCTGTCCCTACTGCACCAGCTCTTTCTTCTGTA...AGCCACTGTGCCCGGCTCATAGGCCATATTTATGACCCATTTACTAACAGGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576932.5
CDS-3UTR CCA 90 bp AGGTATACTTCTTTGACTTCGCTTACATCCACACCTCCTGGGAAGCCCTGTGACTATTCTCCATCAATATaGCGGACATCACTCGCACAT +
Preference number: 4 (lower is better)
Translates to: RYTSLTSLTSTPPGKPCDYSPSI*RTSLAH
Trigger: ATGTGCGAGTGATGTCCGCCATATTGATGGAGAATA...GTCACAGGGCTTCCCAGGAGGTGTGGATGTAAGCGAAGTCAAAGAAGTATACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570965.5
ENST00000571319.5
CDS-3UTR CCA 90 bp TTGACTTCGCTTACATCCACACCTCCTGGGAAGCCCTGTGACCAAGTCTTAATGAGCTCTATGTCTTCATaGTTTTCAGACCCAGGAGTA +
Preference number: 4 (lower is better)
Translates to: LTSLTSTPPGKPCDQVLMSSMSS*FSDPGV
Trigger: TACTCCTGGGTCTGAAAACCATGAAGACATAGAGCT...CATTAAGACTTGGTCACAGGGCTTCCCAGGAGGTGTGGATGTAAGCGAAGTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570965.5
ENST00000571319.5
CDS-3UTR CCA 90 bp AAGGAGAACTGTTTAACATCAAGCTCTTCTGCTGGTCTGAAAAGACCTGAGTGTGAGGAGATCTTGAGATaGGGCAGAAGGCTCACTGGT +
Preference number: 4 (lower is better)
Translates to: KENCLTSSSSAGLKRPECEEILR*GRRLTG
Trigger: ACCAGTGAGCCTTCTGCCCCATCTCAAGATCTCCTC...ACACTCAGGTCTTTTCAGACCAGCAGAAGAGCTTGATGTTAAACAGTTCTCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570371.5
ENST00000575333.5
CDS-3UTR TCA 90 bp GTGCAGTTTTCCAATCTGTTCTGGGACCAATGTAACAGTCGAGTTCTTTGGAGCTCCTGGGAAGCCCTGTaGCCAAGTCTTAATGAAATT +
Preference number: 4 (lower is better)
Translates to: VQFSNLFWDQCNSRVLWSSWEAL*PSLNEI
Trigger: AATTTCATTAAGACTTGGTCACAGGGCTTCCCAGGA...GCTCCAAAGAACTCGACTGTTACATTGGTCCCAGAACAGATTGGAAAACTGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570965.5
CDS-3UTR TCA 90 bp CCTTTTCTTCAAAGCTTTCACTGCATCTTTTGGCCCATCCTGGGTAGTGTTAATTCTGAGGGAGGAAACTaGACGCCTTTCTTAACCAGG +
Preference number: 4 (lower is better)
Translates to: PFLQSFHCIFWPILGSVNSEGGN*TPFLTR
Trigger: CCTGGTTAAGAAAGGCGTTCAGTTTCCTCCCTCAGA...ATTAACACTACCCAGGATGGGCCAAAAGATGCAGTGAAAGCTTTGAAGAAAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570965.5
CDS-3UTR TCA 90 bp TCATGCAGGTCTAAATGCCCTGTCTACTTGTTCCTCTATAGCTCGAGCATTGCCGGATTTGATGAGATTTaGGCAGTCTCTTGTCTTGCT +
Preference number: 4 (lower is better)
Translates to: SCRSKCPVYLFLYSSSIAGFDEI*AVSCLA
Trigger: AGCAAGACAAGAGACTGCTCAAATCTCATCAAATCC...GGCAATGCTCGAGCTATAGAGGAACAAGTAGACAGGGCATTTAGACCTGCATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572405.5
CDS-3UTR TCA 90 bp TTGCCTGTTAGTAAATGGGTCATAAATATGGCCTATGAGCCGGGCACAGTGGCTGGATTTGATGAGATTTaGGCAGTCTCTTGTCTTGCT +
Preference number: 4 (lower is better)
Translates to: LPVSKWVINMAYEPGTVAGFDEI*AVSCLA
Trigger: AGCAAGACAAGAGACTGCTCAAATCTCATCAAATCC...AGCCACTGTGCCCGGCTCATAGGCCATATTTATGACCCATTTACTAACAGGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576932.5
CDS-3UTR TCA 90 bp AAGGAGAACTGTTTAACATCAAGCTCTTCTGCTGGTCTGAAAAGACCTGAGTGTGATTATTCATGGTGTTaGGTTCTCCCAGAGTGGCCC +
Preference number: 4 (lower is better)
Translates to: KENCLTSSSSAGLKRPECDYSWC*VLPEWP
Trigger: GGGCCACTCTGGGAGAACTCAACACCATGAATAATC...ACACTCAGGTCTTTTCAGACCAGCAGAAGAGCTTGATGTTAAACAGTTCTCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570371.5
ENST00000575333.5
CDS-3UTR TCA 90 bp GAGTATTCTCCATCAATATGGCGGACATCACTCGCACATTCATTTTCACCATATATGCGTGGCTTGAGGTaGGGTTTTGGCTGGTCCTTT +
Preference number: 4 (lower is better)
Translates to: EYSPSIWRTSLAHSFSPYMRGLR*GFGWSF
Trigger: AAAGGACCAGCCAAAACCTCACCTCAAGCCACGCAT...ATATGGTGAAAATGAATGTGCGAGTGATGTCCGCCATATTGATGGAGAATACTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571319.5
CDS-3UTR TCA 90 bp AAACTGAACGCCTTTCTTAACCAGGTCGAGGTATACTTCTTTGACTTCGCTTACCCCCAATCTTCAGTCTaGACTCCAGCAAATGTAGCC +
Preference number: 4 (lower is better)
Translates to: KLNAFLNQVEVYFFDFAYPQSSV*TPANVA
Trigger: GGCTACATTTGCTGGAGTTCAGACTGAAGATTGGGG...GTAAGCGAAGTCAAAGAAGTATACCTCGACCTGGTTAAGAAAGGCGTTCAGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000570965.5
ENST00000571319.5
ENST00000572360.5
CDS-3UTR GCA 90 bp AGTTTCTGCAGAAGCTCTATGTCTTCATGGTTTTCAGACCCAGGAGTATTCTCCAGAAGAAAGAGCTGGTaGAGTAGGGACAGATGTTGG +
Preference number: 4 (lower is better)
Translates to: SFCRSSMSSWFSDPGVFSRRKSW*SRDRCW
Trigger: CCAACATCTGTCCCTACTGCACCAGCTCTTTCTTCT...GGAGAATACTCCTGGGTCTGAAAACCATGAAGACATAGAGCTTCTGCAGAAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570965.5
CDS-3UTR GCA 90 bp GTATTTAATCACGTAATTAAGGAGAACTGTTTAACATCAAGCTCTTCTGCTGGTCCGGGAGGGGAGGTGTaGGCCCTGCCCTTTAAAGTT +
Preference number: 4 (lower is better)
Translates to: VFNHVIKENCLTSSSSAGPGGEV*ALPFKV
Trigger: AACTTTAAAGGGCAGGGCGCACACCTCCCCTCCCGG...ACCAGCAGAAGAGCTTGATGTTAAACAGTTCTCCTTAATTACGTGATTAAATAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570371.5
CDS-3UTR GCA 90 bp CCAGACACATCCCATTGCTATACTGGGTTTGACTCAACCATTTGCCGGGAAGTACTGAATTTCTCCGCTTaGATCAGAGATACTCCCTTA +
Preference number: 4 (lower is better)
Translates to: PDTSHCYTGFDSTICREVLNFSA*IRDTPL
Trigger: TAAGGGAGTATCTCTGATGCAAGCGGAGAAATTCAG...TACTTCCCGGCAAATGGTTGAGTCAAACCCAGTATAGCAATGGGATGTGTCTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575333.5
CDS-3UTR CCA 90 bp ACAGAAGAAAGAGCTGGTGCAGTAGGGACAGATGTTGGAGGATTTGATGAGATTCAGAGACTGGAAACTTaGACCACAGTTCTGCACACA +
Preference number: 4 (lower is better)
Translates to: TEERAGAVGTDVGGFDEIQRLET*TTVLHT
Trigger: TGTGTGCAGAACTGTGGTCCAAGTTTCCAGTCTCTG...AATCTCATCAAATCCTCCAACATCTGTCCCTACTGCACCAGCTCTTTCTTCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570965.5
ENST00000572360.5
CDS-3UTR CCA 90 bp TTGCCTGTTAGTAAATGGGTCATAAATATGGCCTATGAGCCGGGCACAGTGGCTTTCACAATCAGAGACTaGAAACTTGGACCACAGTTC +
Preference number: 4 (lower is better)
Translates to: LPVSKWVINMAYEPGTVAFTIRD*KLGPQF
Trigger: GAACTGTGGTCCAAGTTTCCAGTCTCTGATTGTGAA...AGCCACTGTGCCCGGCTCATAGGCCATATTTATGACCCATTTACTAACAGGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576932.5
CDS-3UTR CCA 90 bp CTCAACAGTTACATCTTCGTTCTCCACCACCACAAGCAGGTCCATGATCCTCTCTTTTCCAATCTGTTCTaGGACCAATGTAACAGTCGA +
Preference number: 4 (lower is better)
Translates to: LNSYIFVLHHHKQVHDPLFSNLF*DQCNSR
Trigger: TCGACTGTTACATTGGTCCCAGAACAGATTGGAAAA...GAGAGGATCATGGACCTGCTTGTGGTGGTGGAGAACGAAGATGTAACTGTTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570965.5
CDS-3UTR CCA 90 bp TTGCCTGTTAGTAAATGGGTCATAAATATGGCCTATGAGCCGGGCACAGTGGCTTATTCTCCATCAATATaGCGGACATCACTCGCACAT +
Preference number: 4 (lower is better)
Translates to: LPVSKWVINMAYEPGTVAYSPSI*RTSLAH
Trigger: ATGTGCGAGTGATGTCCGCCATATTGATGGAGAATA...AGCCACTGTGCCCGGCTCATAGGCCATATTTATGACCCATTTACTAACAGGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576932.5
CDS-3UTR CCA 90 bp TTGCCTGTTAGTAAATGGGTCATAAATATGGCCTATGAGCCGGGCACAGTGGCTAGCTCTATGTCTTCATaGTTTTCAGACCCAGGAGTA +
Preference number: 4 (lower is better)
Translates to: LPVSKWVINMAYEPGTVASSMSS*FSDPGV
Trigger: TACTCCTGGGTCTGAAAACCATGAAGACATAGAGCT...AGCCACTGTGCCCGGCTCATAGGCCATATTTATGACCCATTTACTAACAGGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576932.5
CDS-3UTR CCA 90 bp AAACTGAACGCCTTTCTTAACCAGGTCGAGGTATACTTCTTTGACTTCGCTTACAAAGGTGGCAGACTCTaGTTTGATGGTGCTGCTGCA +
Preference number: 4 (lower is better)
Translates to: KLNAFLNQVEVYFFDFAYKGGRL*FDGAAA
Trigger: TGCAGCAGCACCATCAAACCAGAGTCTGCCACCTTT...GTAAGCGAAGTCAAAGAAGTATACCTCGACCTGGTTAAGAAAGGCGTTCAGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571319.5
CDS-3UTR CCA 90 bp TCATGCAGGTCTAAATGCCCTGTCTACTTGTTCCTCTATAGCTCGAGCATTGCCCAAAGTTTACCAACATaGGTGTACTGCAGCAAGGAA +
Preference number: 4 (lower is better)
Translates to: SCRSKCPVYLFLYSSSIAQSLPT*VYCSKE
Trigger: TTCCTTGCTGCAGTACACCCATGTTGGTAAACTTTG...GGCAATGCTCGAGCTATAGAGGAACAAGTAGACAGGGCATTTAGACCTGCATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572405.5
CDS-3UTR TCA 90 bp TTCTTAACCAGGTCGAGGTATACTTCTTTGACTTCGCTTACATCCACACCTCCTTCCTGGGAAGCCCTGTaGCCAAGTCTTAATGAAATT +
Preference number: 4 (lower is better)
Translates to: FLTRSRYTSLTSLTSTPPSWEAL*PSLNEI
Trigger: AATTTCATTAAGACTTGGTCACAGGGCTTCCCAGGA...AGGAGGTGTGGATGTAAGCGAAGTCAAAGAAGTATACCTCGACCTGGTTAAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000570965.5
ENST00000571319.5
ENST00000572360.5
CDS-3UTR TCA 90 bp TTCTTAACCAGGTCGAGGTATACTTCTTTGACTTCGCTTACATCCACACCTCCTCGAGGTATACTTCTTTaGCTTCGCTTACATCCACAC +
Preference number: 4 (lower is better)
Translates to: FLTRSRYTSLTSLTSTPPRGILL*LRLHPH
Trigger: GTGTGGATGTAAGCGAAGTCAAAGAAGTATACCTCG...AGGAGGTGTGGATGTAAGCGAAGTCAAAGAAGTATACCTCGACCTGGTTAAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000570965.5
ENST00000571319.5
ENST00000572360.5
CDS-3UTR TCA 90 bp AAGCACTCAAAGTTTGCACCAAAGTTTACCAACATGGGTGTACTGCAGCAAGGACGAGGTATACTTCTTTaGCTTCGCTTACATCCACAC +
Preference number: 4 (lower is better)
Translates to: KHSKFAPKFTNMGVLQQGRGILL*LRLHPH
Trigger: GTGTGGATGTAAGCGAAGTCAAAGAAGTATACCTCG...TCCTTGCTGCAGTACACCCATGTTGGTAAACTTTGGTGCAAACTTTGAGTGCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572405.5
CDS-3UTR TCA 90 bp ATTAAGGAGAACTGTTTAACATCAAGCTCTTCTGCTGGTCTGAAAAGACCTGAGCCCCAATCTTCAGTCTaGACTCCAGCAAATGTAGCC +
Preference number: 4 (lower is better)
Translates to: IKENCLTSSSSAGLKRPEPQSSV*TPANVA
Trigger: GGCTACATTTGCTGGAGTTCAGACTGAAGATTGGGG...CTCAGGTCTTTTCAGACCAGCAGAAGAGCTTGATGTTAAACAGTTCTCCTTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000570371.5
ENST00000575333.5
CDS-3UTR TCA 90 bp GAGTATTCTCCATCAATATGGCGGACATCACTCGCACATTCATTTTCACCATATCCCCAATCTTCAGTCTaGACTCCAGCAAATGTAGCC +
Preference number: 4 (lower is better)
Translates to: EYSPSIWRTSLAHSFSPYPQSSV*TPANVA
Trigger: GGCTACATTTGCTGGAGTTCAGACTGAAGATTGGGG...ATATGGTGAAAATGAATGTGCGAGTGATGTCCGCCATATTGATGGAGAATACTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000570965.5
ENST00000571319.5
CDS-3UTR TCA 90 bp ACTTCTATCAGCATTAGTGGGTGTAAGAGAACAGTGAAGCAGTATCTTCAAAGGCCCCAATCTTCAGTCTaGACTCCAGCAAATGTAGCC +
Preference number: 4 (lower is better)
Translates to: TSISISGCKRTVKQYLQRPQSSV*TPANVA
Trigger: GGCTACATTTGCTGGAGTTCAGACTGAAGATTGGGG...CCTTTGAAGATACTGCTTCACTGTTCTCTTACACCCACTAATGCTGATAGAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572405.5
CDS-3UTR TCA 90 bp AAGCACTCAAAGTTTGCACCAAAGTTTACCAACATGGGTGTACTGCAGCAAGGATTGACTGATAGTCCCTaGAATCGTACAACACCTGCA +
Preference number: 4 (lower is better)
Translates to: KHSKFAPKFTNMGVLQQGLTDSP*NRTTPA
Trigger: TGCAGGTGTTGTACGATTTCAGGGACTATCAGTCAA...TCCTTGCTGCAGTACACCCATGTTGGTAAACTTTGGTGCAAACTTTGAGTGCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572405.5
CDS-3UTR GCA 90 bp GCTTTCACTGCATCTTTTGGCCCATCCTGGGTAGTGTTAATTATGTCACAGATGCTTCAAAGCTTTCACTaGATCTTTTGGCCCATCCTG +
Preference number: 4 (lower is better)
Translates to: AFTASFGPSWVVLIMSQMLQSFH*IFWPIL
Trigger: CAGGATGGGCCAAAAGATGCAGTGAAAGCTTTGAAG...CATCTGTGACATAATTAACACTACCCAGGATGGGCCAAAAGATGCAGTGAAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570965.5
CDS-3UTR GCA 90 bp CTGAACGCCTTTCTTAACCAGGTCGAGGTATACTTCTTTGACTTCGCTTACATCCTTCAAAGCTTTCACTaGATCTTTTGGCCCATCCTG +
Preference number: 4 (lower is better)
Translates to: LNAFLNQVEVYFFDFAYILQSFH*IFWPIL
Trigger: CAGGATGGGCCAAAAGATGCAGTGAAAGCTTTGAAG...GATGTAAGCGAAGTCAAAGAAGTATACCTCGACCTGGTTAAGAAAGGCGTTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570965.5
ENST00000572360.5
CDS-3UTR GCA 90 bp AAGCACTCAAAGTTTGCACCAAAGTTTACCAACATGGGTGTACTGCAGCAAGGACTTCAAAGCTTTCACTaGATCTTTTGGCCCATCCTG +
Preference number: 4 (lower is better)
Translates to: KHSKFAPKFTNMGVLQQGLQSFH*IFWPIL
Trigger: CAGGATGGGCCAAAAGATGCAGTGAAAGCTTTGAAG...TCCTTGCTGCAGTACACCCATGTTGGTAAACTTTGGTGCAAACTTTGAGTGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572405.5
CDS-3UTR CCA 90 bp AACGCCTTTCTTAACCAGGTCGAGGTATACTTCTTTGACTTCGCTTACATCCACTACAGAAGAAAGAGCTaGTGCAGTAGGGACAGATGT +
Preference number: 4 (lower is better)
Translates to: NAFLNQVEVYFFDFAYIHYRRKS*CSRDRC
Trigger: ACATCTGTCCCTACTGCACCAGCTCTTTCTTCTGTA...GTGGATGTAAGCGAAGTCAAAGAAGTATACCTCGACCTGGTTAAGAAAGGCGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570965.5
ENST00000572360.5
CDS-3UTR CCA 90 bp TTGCCTGTTAGTAAATGGGTCATAAATATGGCCTATGAGCCGGGCACAGTGGCTTTTTCCAATCTGTTCTaGGACCAATGTAACAGTCGA +
Preference number: 4 (lower is better)
Translates to: LPVSKWVINMAYEPGTVAFSNLF*DQCNSR
Trigger: TCGACTGTTACATTGGTCCCAGAACAGATTGGAAAA...AGCCACTGTGCCCGGCTCATAGGCCATATTTATGACCCATTTACTAACAGGCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000576932.5
CDS-3UTR CCA 90 bp ATTAGCTCAACAGTTACATCTTCGTTCTCCACCACCACAAGCAGGTCCATGATCTATTCTCCATCAATATaGCGGACATCACTCGCACAT +
Preference number: 4 (lower is better)
Translates to: ISSTVTSSFSTTTSRSMIYSPSI*RTSLAH
Trigger: ATGTGCGAGTGATGTCCGCCATATTGATGGAGAATA...GATCATGGACCTGCTTGTGGTGGTGGAGAACGAAGATGTAACTGTTGAGCTAAT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570965.5
ENST00000571319.5
CDS-3UTR CCA 90 bp TTTAATCACGTAATTAAGGAGAACTGTTTAACATCAAGCTCTTCTGCTGGTCTGTCTAACCCCACCTTCTaGGAGCCGTGTTTTCCAGCC +
Preference number: 4 (lower is better)
Translates to: FNHVIKENCLTSSSSAGLSNPTF*EPCFPA
Trigger: GGCTGGAAAACACGGCTCCCAGAAGGTGGGGTTAGA...CAGACCAGCAGAAGAGCTTGATGTTAAACAGTTCTCCTTAATTACGTGATTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570371.5
CDS-3UTR CCA 90 bp AAGGAGAACTGTTTAACATCAAGCTCTTCTGCTGGTCTGAAAAGACCTGAGTGTCTCTCAAAAGTTAGGTaGCTGAGAGGTGGCAGAACT +
Preference number: 4 (lower is better)
Translates to: KENCLTSSSSAGLKRPECLSKVR*LRGGRT
Trigger: AGTTCTGCCACCTCTCAGCCACCTAACTTTTGAGAG...ACACTCAGGTCTTTTCAGACCAGCAGAAGAGCTTGATGTTAAACAGTTCTCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000575333.5
CDS-3UTR TCA 90 bp TGTAAGAGAACAGTGAAGCAGTATCTTCAAAGGCCTAGAATTTTGTGCCTAGAATCTGAGGGAGGAAACTaGACGCCTTTCTTAACCAGG +
Preference number: 4 (lower is better)
Translates to: CKRTVKQYLQRPRILCLESEGGN*TPFLTR
Trigger: CCTGGTTAAGAAAGGCGTTCAGTTTCCTCCCTCAGA...TTCTAGGCACAAAATTCTAGGCCTTTGAAGATACTGCTTCACTGTTCTCTTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572405.5
CDS-3UTR TCA 90 bp CTGAACGCCTTTCTTAACCAGGTCGAGGTATACTTCTTTGACTTCGCTTACATCGGATTTGATGAGATTTaGGCAGTCTCTTGTCTTGCT +
Preference number: 4 (lower is better)
Translates to: LNAFLNQVEVYFFDFAYIGFDEI*AVSCLA
Trigger: AGCAAGACAAGAGACTGCTCAAATCTCATCAAATCC...GATGTAAGCGAAGTCAAAGAAGTATACCTCGACCTGGTTAAGAAAGGCGTTCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570965.5
ENST00000572360.5
CDS-3UTR TCA 90 bp TTGCCTGTTAGTAAATGGGTCATAAATATGGCCTATGAGCCGGGCACAGTGGCTAAATCCTCATTCACCTaGATTAGCTCAACAGTTACA +
Preference number: 4 (lower is better)
Translates to: LPVSKWVINMAYEPGTVAKSSFT*ISSTVT
Trigger: TGTAACTGTTGAGCTAATTCAGGTGAATGAGGATTT...AGCCACTGTGCCCGGCTCATAGGCCATATTTATGACCCATTTACTAACAGGCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576932.5
CDS-3UTR TCA 90 bp CACGTAATTAAGGAGAACTGTTTAACATCAAGCTCTTCTGCTGGTCTGAAAAGAGATTATTCATGGTGTTaGGTTCTCCCAGAGTGGCCC +
Preference number: 4 (lower is better)
Translates to: HVIKENCLTSSSSAGLKRDYSWC*VLPEWP
Trigger: GGGCCACTCTGGGAGAACTCAACACCATGAATAATC...TCTTTTCAGACCAGCAGAAGAGCTTGATGTTAAACAGTTCTCCTTAATTACGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570371.5
ENST00000575333.5
CDS-3UTR GCA 90 bp ACAGAAGAAAGAGCTGGTGCAGTAGGGACAGATGTTGGAGGATTTGATGAGATTATTATGTCACAGATGTaGATGAACTGGCCCCAATCT +
Preference number: 4 (lower is better)
Translates to: TEERAGAVGTDVGGFDEIIMSQM*MNWPQS
Trigger: AGATTGGGGCCAGTTCATGCACATCTGTGACATAAT...AATCTCATCAAATCCTCCAACATCTGTCCCTACTGCACCAGCTCTTTCTTCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570965.5
ENST00000572360.5
CDS-3UTR GCA 90 bp TCATGCAGGTCTAAATGCCCTGTCTACTTGTTCCTCTATAGCTCGAGCATTGCCGGACATTTTTGGATATaGAAGCACTCAAAGTTTGCA +
Preference number: 4 (lower is better)
Translates to: SCRSKCPVYLFLYSSSIAGHFWI*KHSKFA
Trigger: TGCAAACTTTGAGTGCTTGCATATCCAAAAATGTCC...GGCAATGCTCGAGCTATAGAGGAACAAGTAGACAGGGCATTTAGACCTGCATGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000572405.5
CDS-3UTR GCA 90 bp ATTAAGGAGAACTGTTTAACATCAAGCTCTTCTGCTGGTCTGAAAAGACCTGAGTTCTGGCAAGGAGTATaGTTGGCTTTAGGCCTGCTT +
Preference number: 4 (lower is better)
Translates to: IKENCLTSSSSAGLKRPEFWQGV*LALGLL
Trigger: AAGCAGGCCTAAAGCCAAGCATACTCCTTGCCAGAA...CTCAGGTCTTTTCAGACCAGCAGAAGAGCTTGATGTTAAACAGTTCTCCTTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570371.5
CDS-3UTR GCA 90 bp TTGCCTGTTAGTAAATGGGTCATAAATATGGCCTATGAGCCGGGCACAGTGGCTTACTTCTTAGCTTGTTaGCTGTTAGTAAATGGGTCA +
Preference number: 4 (lower is better)
Translates to: LPVSKWVINMAYEPGTVAYFLAC*LLVNGS
Trigger: TGACCCATTTACTAACAGGCAACAAGCTAAGAAGTA...AGCCACTGTGCCCGGCTCATAGGCCATATTTATGACCCATTTACTAACAGGCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576932.5
CDS-3UTR CCA 90 bp ACTTCTATCAGCATTAGTGGGTGTAAGAGAACAGTGAAGCAGTATCTTCAAAGGCAGAGACTGGAAACTTaGACCACAGTTCTGCACACA +
Preference number: 4 (lower is better)
Translates to: TSISISGCKRTVKQYLQRQRLET*TTVLHT
Trigger: TGTGTGCAGAACTGTGGTCCAAGTTTCCAGTCTCTG...CCTTTGAAGATACTGCTTCACTGTTCTCTTACACCCACTAATGCTGATAGAAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572405.5
CDS-3UTR CCA 90 bp GTGAGACTCTCAAAAGTTAGGTGGCTGAGAGGTGGCAGAACTGGCATTTCAACTAACAGTCGAGTTCTTTaGAGCAATTACAGAAGAAAG +
Preference number: 4 (lower is better)
Translates to: VRLSKVRWLRGGRTGISTNSRVL*SNYRRK
Trigger: CTTTCTTCTGTAATTGCTCCAAAGAACTCGACTGTT...AGTTGAAATGCCAGTTCTGCCACCTCTCAGCCACCTAACTTTTGAGAGTCTCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575333.5
CDS-3UTR CCA 90 bp TTGCCTGTTAGTAAATGGGTCATAAATATGGCCTATGAGCCGGGCACAGTGGCTAACAGTCGAGTTCTTTaGAGCAATTACAGAAGAAAG +
Preference number: 4 (lower is better)
Translates to: LPVSKWVINMAYEPGTVANSRVL*SNYRRK
Trigger: CTTTCTTCTGTAATTGCTCCAAAGAACTCGACTGTT...AGCCACTGTGCCCGGCTCATAGGCCATATTTATGACCCATTTACTAACAGGCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576932.5
CDS-3UTR CCA 90 bp CTGAACGCCTTTCTTAACCAGGTCGAGGTATACTTCTTTGACTTCGCTTACATCAGCTCTATGTCTTCATaGTTTTCAGACCCAGGAGTA +
Preference number: 4 (lower is better)
Translates to: LNAFLNQVEVYFFDFAYISSMSS*FSDPGV
Trigger: TACTCCTGGGTCTGAAAACCATGAAGACATAGAGCT...GATGTAAGCGAAGTCAAAGAAGTATACCTCGACCTGGTTAAGAAAGGCGTTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570965.5
ENST00000571319.5
CDS-3UTR CCA 90 bp AAACTGAACGCCTTTCTTAACCAGGTCGAGGTATACTTCTTTGACTTCGCTTACACTTTTTGTCATCGCTaGATGATTGCTGGGCAAAGG +
Preference number: 4 (lower is better)
Translates to: KLNAFLNQVEVYFFDFAYTFCHR*MIAGQR
Trigger: CCTTTGCCCAGCAATCATCCAGCGATGACAAAAAGT...GTAAGCGAAGTCAAAGAAGTATACCTCGACCTGGTTAAGAAAGGCGTTCAGTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000571319.5
3UTR CAA 72 bp TCAGAGGACATTTTTGGATATGCAAGCACTCAAAGTTaGCACCAAAGTTTACCAACATGGGTGTACTGCAGC +
Preference number: 4 (lower is better)
Translates to: SEDIFGYASTQS*HQSLPTWVYCS
Trigger: GCTGCAGTACACCCATGTTGGTAAACTTTGGTGCAAACTTTGAGTGCTTGCATATCCAAAAATGTCCTCTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000572405.5
CDS-3UTR TCA 90 bp ATCAATATGGCGGACATCACTCGCACATTCATTTTCACCATATCCAATTCACTGTCCTGGGAAGCCCTGTaGCCAAGTCTTAATGAAATT +
Preference number: 4 (lower is better)
Translates to: INMADITRTFIFTISNSLSWEAL*PSLNEI
Trigger: AATTTCATTAAGACTTGGTCACAGGGCTTCCCAGGA...CAGTGAATTGGATATGGTGAAAATGAATGTGCGAGTGATGTCCGCCATATTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570965.5
ENST00000571319.5
CDS-3UTR TCA 90 bp ATTAGCTCAACAGTTACATCTTCGTTCTCCACCACCACAAGCAGGTCCATGATCAAATCCTCATTCACCTaGATTAGCTCAACAGTTACA +
Preference number: 4 (lower is better)
Translates to: ISSTVTSSFSTTTSRSMIKSSFT*ISSTVT
Trigger: TGTAACTGTTGAGCTAATTCAGGTGAATGAGGATTT...GATCATGGACCTGCTTGTGGTGGTGGAGAACGAAGATGTAACTGTTGAGCTAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570965.5
ENST00000571319.5
CDS-3UTR TCA 90 bp ATCAATATGGCGGACATCACTCGCACATTCATTTTCACCATATCCAATTCACTGGATGTGGTAGTGAGCTaGTCATCCACTTTCTTCTCA +
Preference number: 4 (lower is better)
Translates to: INMADITRTFIFTISNSLDVVVS*SSTFFS
Trigger: TGAGAAGAAAGTGGATGATCAGCTCACTACCACATC...CAGTGAATTGGATATGGTGAAAATGAATGTGCGAGTGATGTCCGCCATATTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571319.5
CDS-3UTR TCA 90 bp CACGTAATTAAGGAGAACTGTTTAACATCAAGCTCTTCTGCTGGTCTGAAAAGATCAGATAGCCATAGATaGGCTCCTGGTGCTTGTAGA +
Preference number: 4 (lower is better)
Translates to: HVIKENCLTSSSSAGLKRSDSHR*APGACR
Trigger: TCTACAAGCACCAGGAGCTCATCTATGGCTATCTGA...TCTTTTCAGACCAGCAGAAGAGCTTGATGTTAAACAGTTCTCCTTAATTACGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570371.5
CDS-3UTR TCA 90 bp AAAAACCCAATGATAATAGTGTGTAGGTTCACAGTAGACTTTAAGTATTGGCCACAAAAGTTAGGTGGCTaGGAGGTGGCAGAACTGGCA +
Preference number: 4 (lower is better)
Translates to: KNPMIIVCRFTVDFKYWPQKLGG*EVAELA
Trigger: TGCCAGTTCTGCCACCTCTCAGCCACCTAACTTTTG...TGGCCAATACTTAAAGTCTACTGTGAACCTACACACTATTATCATTGGGTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000575333.5
CDS-3UTR GCA 90 bp GTAATTAAGGAGAACTGTTTAACATCAAGCTCTTCTGCTGGTCTGAAAAGACCTAGAAGAAAGAGCTGGTaGAGTAGGGACAGATGTTGG +
Preference number: 4 (lower is better)
Translates to: VIKENCLTSSSSAGLKRPRRKSW*SRDRCW
Trigger: CCAACATCTGTCCCTACTGCACCAGCTCTTTCTTCT...AGGTCTTTTCAGACCAGCAGAAGAGCTTGATGTTAAACAGTTCTCCTTAATTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570371.5
ENST00000575333.5
CDS-3UTR GCA 90 bp CACGTAATTAAGGAGAACTGTTTAACATCAAGCTCTTCTGCTGGTCTGAAAAGAAGAAGAAAGAGCTGGTaGAGTAGGGACAGATGTTGG +
Preference number: 4 (lower is better)
Translates to: HVIKENCLTSSSSAGLKRRRKSW*SRDRCW
Trigger: CCAACATCTGTCCCTACTGCACCAGCTCTTTCTTCT...TCTTTTCAGACCAGCAGAAGAGCTTGATGTTAAACAGTTCTCCTTAATTACGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570371.5
ENST00000575333.5
CDS-3UTR GCA 90 bp CACGTAATTAAGGAGAACTGTTTAACATCAAGCTCTTCTGCTGGTCTGAAAAGATCCATGATCCTCTCCTaGATCTCCCGACCTGTTTTA +
Preference number: 4 (lower is better)
Translates to: HVIKENCLTSSSSAGLKRSMILS*ISRPVL
Trigger: TAAAACAGGTCGGGAGATGCAGGAGAGGATCATGGA...TCTTTTCAGACCAGCAGAAGAGCTTGATGTTAAACAGTTCTCCTTAATTACGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000570371.5
ENST00000575333.5
CDS-3UTR GCA 90 bp CAGATGTTGGAGGATTTGATGAGATTTGAGCAGTCTCTTGTCTTGCTGTTTCAGATTATGTCACAGATGTaGATGAACTGGCCCCAATCT +
Preference number: 4 (lower is better)
Translates to: QMLEDLMRFEQSLVLLFQIMSQM*MNWPQS
Trigger: AGATTGGGGCCAGTTCATGCACATCTGTGACATAAT...CTGAAACAGCAAGACAAGAGACTGCTCAAATCTCATCAAATCCTCCAACATCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570965.5
ENST00000572360.5
CDS-3UTR GCA 90 bp AAGGAGAACTGTTTAACATCAAGCTCTTCTGCTGGTCTGAAAAGACCTGAGTGTATTATGTCACAGATGTaGATGAACTGGCCCCAATCT +
Preference number: 4 (lower is better)
Translates to: KENCLTSSSSAGLKRPECIMSQM*MNWPQS
Trigger: AGATTGGGGCCAGTTCATGCACATCTGTGACATAAT...ACACTCAGGTCTTTTCAGACCAGCAGAAGAGCTTGATGTTAAACAGTTCTCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000570371.5
ENST00000575333.5
CDS-3UTR GCA 90 bp TCCCATTGCTATACTGGGTTTGACTCAACCATTTGCCGGGAAGTAATCACATCTTTTGACTCAACCATTTaGCGGGAAGTAATCACATCT +
Preference number: 4 (lower is better)
Translates to: SHCYTGFDSTICREVITSFDSTI*REVITS
Trigger: AGATGTGATTACTTCCCGGCAAATGGTTGAGTCAAA...AGATGTGATTACTTCCCGGCAAATGGTTGAGTCAAACCCAGTATAGCAATGGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575333.5
CDS-3UTR GCA 90 bp ATTAAGGAGAACTGTTTAACATCAAGCTCTTCTGCTGGTCTGAAAAGACCTGAGCCAGACACATCCCATTaGTATACTGGGTTTGACTCA +
Preference number: 4 (lower is better)
Translates to: IKENCLTSSSSAGLKRPEPDTSH*YTGFDS
Trigger: TGAGTCAAACCCAGTATAGCAATGGGATGTGTCTGG...CTCAGGTCTTTTCAGACCAGCAGAAGAGCTTGATGTTAAACAGTTCTCCTTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575333.5
CDS-3UTR GCA 90 bp AATCACGTAATTAAGGAGAACTGTTTAACATCAAGCTCTTCTGCTGGTCTGAAAGAGGTCAAAACCAATTaGCATGCACTCCAGGAGGCT +
Preference number: 4 (lower is better)
Translates to: NHVIKENCLTSSSSAGLKEVKTN*HALQEA
Trigger: AGCCTCCTGGAGTGCATGGCAATTGGTTTTGACCTC...TTTCAGACCAGCAGAAGAGCTTGATGTTAAACAGTTCTCCTTAATTACGTGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570371.5
CDS-3UTR GCA 90 bp AATCACGTAATTAAGGAGAACTGTTTAACATCAAGCTCTTCTGCTGGTCTGAAACTTGTCATTCTTCTCTaGGCCTCTTTGGCTGCCCTT +
Preference number: 4 (lower is better)
Translates to: NHVIKENCLTSSSSAGLKLVILL*ASLAAL
Trigger: AAGGGCAGCCAAAGAGGCGCAGAGAAGAATGACAAG...TTTCAGACCAGCAGAAGAGCTTGATGTTAAACAGTTCTCCTTAATTACGTGATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570371.5
CDS-3UTR CCA 90 bp AAGGAGAACTGTTTAACATCAAGCTCTTCTGCTGGTCTGAAAAGACCTGAGTGTTTCACAATCAGAGACTaGAAACTTGGACCACAGTTC +
Preference number: 4 (lower is better)
Translates to: KENCLTSSSSAGLKRPECFTIRD*KLGPQF
Trigger: GAACTGTGGTCCAAGTTTCCAGTCTCTGATTGTGAA...ACACTCAGGTCTTTTCAGACCAGCAGAAGAGCTTGATGTTAAACAGTTCTCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570371.5
ENST00000575333.5
CDS-3UTR CCA 90 bp TTGCCTGTTAGTAAATGGGTCATAAATATGGCCTATGAGCCGGGCACAGTGGCTTCCAAAATCCTTTGTTaGTTTCTAGTAAACCTCTCA +
Preference number: 4 (lower is better)
Translates to: LPVSKWVINMAYEPGTVASKILC*FLVNLS
Trigger: TGAGAGGTTTACTAGAAACCAACAAAGGATTTTGGA...AGCCACTGTGCCCGGCTCATAGGCCATATTTATGACCCATTTACTAACAGGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576932.5
CDS-3UTR CCA 90 bp AAAAACCCAATGATAATAGTGTGTAGGTTCACAGTAGACTTTAAGTATTGGCCAGAGGAGATCTTGAGATaGGGCAGAAGGCTCACTGGT +
Preference number: 4 (lower is better)
Translates to: KNPMIIVCRFTVDFKYWPEEILR*GRRLTG
Trigger: ACCAGTGAGCCTTCTGCCCCATCTCAAGATCTCCTC...TGGCCAATACTTAAAGTCTACTGTGAACCTACACACTATTATCATTGGGTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000575333.5
CDS-3UTR CCA 90 bp TTGCCTGTTAGTAAATGGGTCATAAATATGGCCTATGAGCCGGGCACAGTGGCTTCTGTGGATGAAGACTaGGTTTTAAGTTGTTTGTTA +
Preference number: 4 (lower is better)
Translates to: LPVSKWVINMAYEPGTVASVDED*VLSCLL
Trigger: TAACAAACAACTTAAAACCCAGTCTTCATCCACAGA...AGCCACTGTGCCCGGCTCATAGGCCATATTTATGACCCATTTACTAACAGGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576932.5
CDS-3UTR CCA 90 bp ACTGAATTTGAATGTTCCAGAAAATTATCATATGCGTGGCTTGAGGTGAGGTTTTTTTGGCTGGTCCTTTaGGCAAACGGGGGTATCTCT +
Preference number: 4 (lower is better)
Translates to: TEFECSRKLSYAWLEVRFFWLVL*ANGGIS
Trigger: AGAGATACCCCCGTTTGCCCAAAGGACCAGCCAAAA...AAACCTCACCTCAAGCCACGCATATGATAATTTTCTGGAACATTCAAATTCAGT
42% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000571319.5
CDS-3UTR CCA 90 bp AACGCCTTTCTTAACCAGGTCGAGGTATACTTCTTTGACTTCGCTTACATCCACAAATTATCATATGCGTaGCTTGAGGTGAGGTTTTGG +
Preference number: 4 (lower is better)
Translates to: NAFLNQVEVYFFDFAYIHKLSYA*LEVRFW
Trigger: CCAAAACCTCACCTCAAGCCACGCATATGATAATTT...GTGGATGTAAGCGAAGTCAAAGAAGTATACCTCGACCTGGTTAAGAAAGGCGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571319.5
CDS-3UTR CCA 90 bp ATTAGCTCAACAGTTACATCTTCGTTCTCCACCACCACAAGCAGGTCCATGATCGTCAATAAGCCATCCTaGGTAGTGTTAATTATGTCA +
Preference number: 4 (lower is better)
Translates to: ISSTVTSSFSTTTSRSMIVNKPS*VVLIMS
Trigger: TGACATAATTAACACTACCCAGGATGGCTTATTGAC...GATCATGGACCTGCTTGTGGTGGTGGAGAACGAAGATGTAACTGTTGAGCTAAT
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571319.5
CDS-3UTR CCA 90 bp GTAATTAAGGAGAACTGTTTAACATCAAGCTCTTCTGCTGGTCTGAAAAGACCTGCTTTCCGTTTCTTCTaGCAAGGAGTATGCTTGGCT +
Preference number: 4 (lower is better)
Translates to: VIKENCLTSSSSAGLKRPAFRFF*QGVCLA
Trigger: AGCCAAGCATACTCCTTGCCAGAAGAAACGGAAAGC...AGGTCTTTTCAGACCAGCAGAAGAGCTTGATGTTAAACAGTTCTCCTTAATTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570371.5
CDS-3UTR CCA 90 bp CACGTAATTAAGGAGAACTGTTTAACATCAAGCTCTTCTGCTGGTCTGAAAAGAGAGAGGTGGCAGAACTaGCATTTCAACTTGGACTTC +
Preference number: 4 (lower is better)
Translates to: HVIKENCLTSSSSAGLKRERWQN*HFNLDF
Trigger: GAAGTCCAAGTTGAAATGCCAGTTCTGCCACCTCTC...TCTTTTCAGACCAGCAGAAGAGCTTGATGTTAAACAGTTCTCCTTAATTACGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575333.5
CDS-3UTR CCA 90 bp TTGCCTGTTAGTAAATGGGTCATAAATATGGCCTATGAGCCGGGCACAGTGGCTTTGCCTGTTAGTAAATaGGTCATAAATATGGCCTAT +
Preference number: 4 (lower is better)
Translates to: LPVSKWVINMAYEPGTVALPVSK*VINMAY
Trigger: ATAGGCCATATTTATGACCCATTTACTAACAGGCAA...AGCCACTGTGCCCGGCTCATAGGCCATATTTATGACCCATTTACTAACAGGCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576932.5
CDS-3UTR TCA 90 bp CACGTAATTAAGGAGAACTGTTTAACATCAAGCTCTTCTGCTGGTCTGAAAAGACGAGGTATACTTCTTTaGCTTCGCTTACATCCACAC +
Preference number: 4 (lower is better)
Translates to: HVIKENCLTSSSSAGLKRRGILL*LRLHPH
Trigger: GTGTGGATGTAAGCGAAGTCAAAGAAGTATACCTCG...TCTTTTCAGACCAGCAGAAGAGCTTGATGTTAAACAGTTCTCCTTAATTACGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570371.5
ENST00000575333.5
CDS-3UTR TCA 90 bp GTGGTATTTAATCACGTAATTAAGGAGAACTGTTTAACATCAAGCTCTTCTGCTTCTGAGGGAGGAAACTaGACGCCTTTCTTAACCAGG +
Preference number: 4 (lower is better)
Translates to: VVFNHVIKENCLTSSSSASEGGN*TPFLTR
Trigger: CCTGGTTAAGAAAGGCGTTCAGTTTCCTCCCTCAGA...AGCAGAAGAGCTTGATGTTAAACAGTTCTCCTTAATTACGTGATTAAATACCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570371.5
ENST00000575333.5
CDS-3UTR TCA 90 bp GAGTATTCTCCATCAATATGGCGGACATCACTCGCACATTCATTTTCACCATATGGATTTGATGAGATTTaGGCAGTCTCTTGTCTTGCT +
Preference number: 4 (lower is better)
Translates to: EYSPSIWRTSLAHSFSPYGFDEI*AVSCLA
Trigger: AGCAAGACAAGAGACTGCTCAAATCTCATCAAATCC...ATATGGTGAAAATGAATGTGCGAGTGATGTCCGCCATATTGATGGAGAATACTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570965.5
CDS-3UTR TCA 90 bp AAGCACTCAAAGTTTGCACCAAAGTTTACCAACATGGGTGTACTGCAGCAAGGATTACTCAATGTTTGTTaGGTGGATGAAAATAGAGGC +
Preference number: 4 (lower is better)
Translates to: KHSKFAPKFTNMGVLQQGLLNVC*VDENRG
Trigger: GCCTCTATTTTCATCCACTCAACAAACATTGAGTAA...TCCTTGCTGCAGTACACCCATGTTGGTAAACTTTGGTGCAAACTTTGAGTGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572405.5
CDS-3UTR TCA 90 bp TTAAAGCCTGTGTTTTTCCTTCTACATTTCACAACCACTCAGTTCATACCTTGTTTGCTATACTGGGTTTaGCTCAACCATTTGCCGGGA +
Preference number: 4 (lower is better)
Translates to: LKPVFFLLHFTTTQFIPCLLYWV*LNHLPG
Trigger: TCCCGGCAAATGGTTGAGTCAAACCCAGTATAGCAA...ACAAGGTATGAACTGAGTGGTTGTGAAATGTAGAAGGAAAAACACAGGCTTTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000575333.5
CDS-3UTR TCA 90 bp GTATTTAATCACGTAATTAAGGAGAACTGTTTAACATCAAGCTCTTCTGCTGGTGAAGGGGACCTGTTTTaGCTTATGTCCGTGGTCTTG +
Preference number: 4 (lower is better)
Translates to: VFNHVIKENCLTSSSSAGEGDLF*LMSVVL
Trigger: CAAGACCACGGACATAAGTCAAAACAGGTCCCCTTC...ACCAGCAGAAGAGCTTGATGTTAAACAGTTCTCCTTAATTACGTGATTAAATAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570371.5
CDS-3UTR TCA 90 bp GTAATTAAGGAGAACTGTTTAACATCAAGCTCTTCTGCTGGTCTGAAAAGACCTTATTGGCCATTGGGCTaGACAACTTCTACAAAGCAG +
Preference number: 4 (lower is better)
Translates to: VIKENCLTSSSSAGLKRPYWPLG*TTSTKQ
Trigger: CTGCTTTGTAGAAGTTGTTCAGCCCAATGGCCAATA...AGGTCTTTTCAGACCAGCAGAAGAGCTTGATGTTAAACAGTTCTCCTTAATTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575333.5
CDS-3UTR GCA 90 bp ATTAAGGAGAACTGTTTAACATCAAGCTCTTCTGCTGGTCTGAAAAGACCTGAGCTTGGACCACAGTTCTaGACACACATGTCAATAAGT +
Preference number: 4 (lower is better)
Translates to: IKENCLTSSSSAGLKRPELGPQF*THMSIS
Trigger: ACTTATTGACATGTGTGTGCAGAACTGTGGTCCAAG...CTCAGGTCTTTTCAGACCAGCAGAAGAGCTTGATGTTAAACAGTTCTCCTTAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570371.5
ENST00000575333.5
CDS-3UTR GCA 90 bp GAGTATTCTCCATCAATATGGCGGACATCACTCGCACATTCATTTTCACCATATCTTGGACCACAGTTCTaGACACACATGTCAATAAGT +
Preference number: 4 (lower is better)
Translates to: EYSPSIWRTSLAHSFSPYLGPQF*THMSIS
Trigger: ACTTATTGACATGTGTGTGCAGAACTGTGGTCCAAG...ATATGGTGAAAATGAATGTGCGAGTGATGTCCGCCATATTGATGGAGAATACTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570965.5
CDS-3UTR GCA 90 bp ACTTCTATCAGCATTAGTGGGTGTAAGAGAACAGTGAAGCAGTATCTTCAAAGGATTATGTCACAGATGTaGATGAACTGGCCCCAATCT +
Preference number: 4 (lower is better)
Translates to: TSISISGCKRTVKQYLQRIMSQM*MNWPQS
Trigger: AGATTGGGGCCAGTTCATGCACATCTGTGACATAAT...CCTTTGAAGATACTGCTTCACTGTTCTCTTACACCCACTAATGCTGATAGAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572405.5
CDS-3UTR GCA 90 bp AGTTTCTGCAGAAGCTCTATGTCTTCATGGTTTTCAGACCCAGGAGTATTCTCCAAATGTAGCCTTTTCTaGCAAGAAAAAGCTGTTGAG +
Preference number: 4 (lower is better)
Translates to: SFCRSSMSSWFSDPGVFSKCSLF*QEKAVE
Trigger: CTCAACAGCTTTTTCTTGGCAGAAAAGGCTACATTT...GGAGAATACTCCTGGGTCTGAAAACCATGAAGACATAGAGCTTCTGCAGAAACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000570965.5
CDS-3UTR CCA 90 bp TGTAAGAGAACAGTGAAGCAGTATCTTCAAAGGCCTAGAATTTTGTGCCTAGAATACAGAAGAAAGAGCTaGTGCAGTAGGGACAGATGT +
Preference number: 4 (lower is better)
Translates to: CKRTVKQYLQRPRILCLEYRRKS*CSRDRC
Trigger: ACATCTGTCCCTACTGCACCAGCTCTTTCTTCTGTA...TTCTAGGCACAAAATTCTAGGCCTTTGAAGATACTGCTTCACTGTTCTCTTACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572405.5
CDS-3UTR CCA 90 bp AAGCACTCAAAGTTTGCACCAAAGTTTACCAACATGGGTGTACTGCAGCAAGGAAACAGTCGAGTTCTTTaGAGCAATTACAGAAGAAAG +
Preference number: 4 (lower is better)
Translates to: KHSKFAPKFTNMGVLQQGNSRVL*SNYRRK
Trigger: CTTTCTTCTGTAATTGCTCCAAAGAACTCGACTGTT...TCCTTGCTGCAGTACACCCATGTTGGTAAACTTTGGTGCAAACTTTGAGTGCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572405.5
CDS-3UTR CCA 90 bp ACTTCTATCAGCATTAGTGGGTGTAAGAGAACAGTGAAGCAGTATCTTCAAAGGTATTCTCCATCAATATaGCGGACATCACTCGCACAT +
Preference number: 4 (lower is better)
Translates to: TSISISGCKRTVKQYLQRYSPSI*RTSLAH
Trigger: ATGTGCGAGTGATGTCCGCCATATTGATGGAGAATA...CCTTTGAAGATACTGCTTCACTGTTCTCTTACACCCACTAATGCTGATAGAAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572405.5
CDS-3UTR CCA 90 bp ATTAAGGAGAACTGTTTAACATCAAGCTCTTCTGCTGGTCTGAAAAGACCTGAGTATTCTCCATCAATATaGCGGACATCACTCGCACAT +
Preference number: 4 (lower is better)
Translates to: IKENCLTSSSSAGLKRPEYSPSI*RTSLAH
Trigger: ATGTGCGAGTGATGTCCGCCATATTGATGGAGAATA...CTCAGGTCTTTTCAGACCAGCAGAAGAGCTTGATGTTAAACAGTTCTCCTTAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570371.5
ENST00000575333.5
CDS-3UTR CCA 90 bp TTCTACATTTCACAACCACTCAGTTCATACCTTGTAATCCCTGAATTTCTCCGCAGCTCTATGTCTTCATaGTTTTCAGACCCAGGAGTA +
Preference number: 4 (lower is better)
Translates to: FYISQPLSSYLVIPEFLRSSMSS*FSDPGV
Trigger: TACTCCTGGGTCTGAAAACCATGAAGACATAGAGCT...GCGGAGAAATTCAGGGATTACAAGGTATGAACTGAGTGGTTGTGAAATGTAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575333.5
CDS-3UTR CCA 90 bp ATTAGCTCAACAGTTACATCTTCGTTCTCCACCACCACAAGCAGGTCCATGATCTCCAAAATCCTTTGTTaGTTTCTAGTAAACCTCTCA +
Preference number: 4 (lower is better)
Translates to: ISSTVTSSFSTTTSRSMISKILC*FLVNLS
Trigger: TGAGAGGTTTACTAGAAACCAACAAAGGATTTTGGA...GATCATGGACCTGCTTGTGGTGGTGGAGAACGAAGATGTAACTGTTGAGCTAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571319.5
CDS-3UTR CCA 90 bp AAGCACTCAAAGTTTGCACCAAAGTTTACCAACATGGGTGTACTGCAGCAAGGAATCAGAGGACATTTTTaGATATGCAAGCACTCAAAG +
Preference number: 4 (lower is better)
Translates to: KHSKFAPKFTNMGVLQQGIRGHF*ICKHSK
Trigger: CTTTGAGTGCTTGCATATCCAAAAATGTCCTCTGAT...TCCTTGCTGCAGTACACCCATGTTGGTAAACTTTGGTGCAAACTTTGAGTGCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000572405.5
CDS-3UTR CCA 90 bp GTAATTAAGGAGAACTGTTTAACATCAAGCTCTTCTGCTGGTCTGAAAAGACCTTGCCCTTTAAAGTTGTaGTCATGTCTAGGAGGAAGG +
Preference number: 4 (lower is better)
Translates to: VIKENCLTSSSSAGLKRPCPLKL*SCLGGR
Trigger: CCTTCCTCCTAGACATGACCACAACTTTAAAGGGCA...AGGTCTTTTCAGACCAGCAGAAGAGCTTGATGTTAAACAGTTCTCCTTAATTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570371.5
CDS-3UTR TCA 90 bp TTTAATCACGTAATTAAGGAGAACTGTTTAACATCAAGCTCTTCTGCTGGTCTGTCCTGGGAAGCCCTGTaGCCAAGTCTTAATGAAATT +
Preference number: 4 (lower is better)
Translates to: FNHVIKENCLTSSSSAGLSWEAL*PSLNEI
Trigger: AATTTCATTAAGACTTGGTCACAGGGCTTCCCAGGA...CAGACCAGCAGAAGAGCTTGATGTTAAACAGTTCTCCTTAATTACGTGATTAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570371.5
ENST00000575333.5
CDS-3UTR TCA 90 bp CACGTAATTAAGGAGAACTGTTTAACATCAAGCTCTTCTGCTGGTCTGAAAAGAGGATTTGATGAGATTTaGGCAGTCTCTTGTCTTGCT +
Preference number: 4 (lower is better)
Translates to: HVIKENCLTSSSSAGLKRGFDEI*AVSCLA
Trigger: AGCAAGACAAGAGACTGCTCAAATCTCATCAAATCC...TCTTTTCAGACCAGCAGAAGAGCTTGATGTTAAACAGTTCTCCTTAATTACGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570371.5
ENST00000575333.5
CDS-3UTR TCA 90 bp AAGGAGAACTGTTTAACATCAAGCTCTTCTGCTGGTCTGAAAAGACCTGAGTGTAAATCCTCATTCACCTaGATTAGCTCAACAGTTACA +
Preference number: 4 (lower is better)
Translates to: KENCLTSSSSAGLKRPECKSSFT*ISSTVT
Trigger: TGTAACTGTTGAGCTAATTCAGGTGAATGAGGATTT...ACACTCAGGTCTTTTCAGACCAGCAGAAGAGCTTGATGTTAAACAGTTCTCCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570371.5
ENST00000575333.5
CDS-3UTR TCA 90 bp AGTTCATACCTTGTAATCCCTGAATTTCTCCGCTTGCATCAGAGATACTCCCTTTGGTCTGAAAAGACCTaGGTGTTTATTTACTTAAGC +
Preference number: 4 (lower is better)
Translates to: SSYLVIPEFLRLHQRYSLWSEKT*VFIYLS
Trigger: GCTTAAGTAAATAAACACTCAGGTCTTTTCAGACCA...AAGGGAGTATCTCTGATGCAAGCGGAGAAATTCAGGGATTACAAGGTATGAACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575333.5
CDS-3UTR GCA 90 bp TGTAAGAGAACAGTGAAGCAGTATCTTCAAAGGCCTAGAATTTTGTGCCTAGAACTTGGACCACAGTTCTaGACACACATGTCAATAAGT +
Preference number: 4 (lower is better)
Translates to: CKRTVKQYLQRPRILCLELGPQF*THMSIS
Trigger: ACTTATTGACATGTGTGTGCAGAACTGTGGTCCAAG...TTCTAGGCACAAAATTCTAGGCCTTTGAAGATACTGCTTCACTGTTCTCTTACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572405.5
CDS-3UTR GCA 90 bp GTATTTAATCACGTAATTAAGGAGAACTGTTTAACATCAAGCTCTTCTGCTGGTAGCAGTCTCTTGTCTTaGTGTTTCAGCCTCTGCTTC +
Preference number: 4 (lower is better)
Translates to: VFNHVIKENCLTSSSSAGSSLLS*CFSLCF
Trigger: GAAGCAGAGGCTGAAACAGCAAGACAAGAGACTGCT...ACCAGCAGAAGAGCTTGATGTTAAACAGTTCTCCTTAATTACGTGATTAAATAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570371.5
ENST00000575333.5
CDS-3UTR GCA 90 bp AAGAGACAAATGAATCCAACTGGAAGTTTCATCGTCTTAAAGTTCCATAAGAAGAGAAGAAAGAGCTGGTaGAGTAGGGACAGATGTTGG +
Preference number: 4 (lower is better)
Translates to: KRQMNPTGSFIVLKFHKKRRKSW*SRDRCW
Trigger: CCAACATCTGTCCCTACTGCACCAGCTCTTTCTTCT...CTTCTTATGGAACTTTAAGACGATGAAACTTCCAGTTGGATTCATTTGTCTCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572405.5
CDS-3UTR GCA 90 bp CACGTAATTAAGGAGAACTGTTTAACATCAAGCTCTTCTGCTGGTCTGAAAAGAATTATGTCACAGATGTaGATGAACTGGCCCCAATCT +
Preference number: 4 (lower is better)
Translates to: HVIKENCLTSSSSAGLKRIMSQM*MNWPQS
Trigger: AGATTGGGGCCAGTTCATGCACATCTGTGACATAAT...TCTTTTCAGACCAGCAGAAGAGCTTGATGTTAAACAGTTCTCCTTAATTACGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000570371.5
ENST00000575333.5
CDS-3UTR GCA 90 bp CTGAACGCCTTTCTTAACCAGGTCGAGGTATACTTCTTTGACTTCGCTTACATCATATCCAATTCACTGTaGAGTTTTCCAATCTCTTGT +
Preference number: 4 (lower is better)
Translates to: LNAFLNQVEVYFFDFAYIISNSL*SFPISC
Trigger: ACAAGAGATTGGAAAACTGCACAGTGAATTGGATAT...GATGTAAGCGAAGTCAAAGAAGTATACCTCGACCTGGTTAAGAAAGGCGTTCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571319.5
CDS-3UTR GCA 90 bp GTGGTATTTAATCACGTAATTAAGGAGAACTGTTTAACATCAAGCTCTTCTGCTCAACACCTTTCCAGCTaGCCCTTCAGAACCAGAATT +
Preference number: 4 (lower is better)
Translates to: VVFNHVIKENCLTSSSSAQHLSS*PFRTRI
Trigger: AATTCTGGTTCTGAAGGGGCAGCTGGAAAGGTGTTG...AGCAGAAGAGCTTGATGTTAAACAGTTCTCCTTAATTACGTGATTAAATACCAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570371.5
CDS-3UTR CCA 90 bp GTATTTAATCACGTAATTAAGGAGAACTGTTTAACATCAAGCTCTTCTGCTGGTCAGAGACTGGAAACTTaGACCACAGTTCTGCACACA +
Preference number: 4 (lower is better)
Translates to: VFNHVIKENCLTSSSSAGQRLET*TTVLHT
Trigger: TGTGTGCAGAACTGTGGTCCAAGTTTCCAGTCTCTG...ACCAGCAGAAGAGCTTGATGTTAAACAGTTCTCCTTAATTACGTGATTAAATAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570371.5
ENST00000575333.5
CDS-3UTR CCA 90 bp GTAATTAAGGAGAACTGTTTAACATCAAGCTCTTCTGCTGGTCTGAAAAGACCTTTCACAATCAGAGACTaGAAACTTGGACCACAGTTC +
Preference number: 4 (lower is better)
Translates to: VIKENCLTSSSSAGLKRPFTIRD*KLGPQF
Trigger: GAACTGTGGTCCAAGTTTCCAGTCTCTGATTGTGAA...AGGTCTTTTCAGACCAGCAGAAGAGCTTGATGTTAAACAGTTCTCCTTAATTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570371.5
ENST00000575333.5
CDS-3UTR CCA 90 bp TTAAAGCCTGTGTTTTTCCTTCTACATTTCACAACCACTCAGTTCATACCTTGTTACAGAAGAAAGAGCTaGTGCAGTAGGGACAGATGT +
Preference number: 4 (lower is better)
Translates to: LKPVFFLLHFTTTQFIPCYRRKS*CSRDRC
Trigger: ACATCTGTCCCTACTGCACCAGCTCTTTCTTCTGTA...ACAAGGTATGAACTGAGTGGTTGTGAAATGTAGAAGGAAAAACACAGGCTTTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000575333.5
CDS-3UTR CCA 90 bp ACTTCTATCAGCATTAGTGGGTGTAAGAGAACAGTGAAGCAGTATCTTCAAAGGTTTTCCAATCTGTTCTaGGACCAATGTAACAGTCGA +
Preference number: 4 (lower is better)
Translates to: TSISISGCKRTVKQYLQRFSNLF*DQCNSR
Trigger: TCGACTGTTACATTGGTCCCAGAACAGATTGGAAAA...CCTTTGAAGATACTGCTTCACTGTTCTCTTACACCCACTAATGCTGATAGAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572405.5
CDS-3UTR CCA 90 bp CACGTAATTAAGGAGAACTGTTTAACATCAAGCTCTTCTGCTGGTCTGAAAAGATATTCTCCATCAATATaGCGGACATCACTCGCACAT +
Preference number: 4 (lower is better)
Translates to: HVIKENCLTSSSSAGLKRYSPSI*RTSLAH
Trigger: ATGTGCGAGTGATGTCCGCCATATTGATGGAGAATA...TCTTTTCAGACCAGCAGAAGAGCTTGATGTTAAACAGTTCTCCTTAATTACGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570371.5
ENST00000575333.5
CDS-3UTR CCA 90 bp CACGTAATTAAGGAGAACTGTTTAACATCAAGCTCTTCTGCTGGTCTGAAAAGAAGCTCTATGTCTTCATaGTTTTCAGACCCAGGAGTA +
Preference number: 4 (lower is better)
Translates to: HVIKENCLTSSSSAGLKRSSMSS*FSDPGV
Trigger: TACTCCTGGGTCTGAAAACCATGAAGACATAGAGCT...TCTTTTCAGACCAGCAGAAGAGCTTGATGTTAAACAGTTCTCCTTAATTACGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000570371.5
ENST00000575333.5
CDS-3UTR TCA 90 bp AAGAGACAAATGAATCCAACTGGAAGTTTCATCGTCTTAAAGTTCCATAAGAAGTCCTGGGAAGCCCTGTaGCCAAGTCTTAATGAAATT +
Preference number: 4 (lower is better)
Translates to: KRQMNPTGSFIVLKFHKKSWEAL*PSLNEI
Trigger: AATTTCATTAAGACTTGGTCACAGGGCTTCCCAGGA...CTTCTTATGGAACTTTAAGACGATGAAACTTCCAGTTGGATTCATTTGTCTCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572405.5
CDS-3UTR TCA 90 bp GAGTATTCTCCATCAATATGGCGGACATCACTCGCACATTCATTTTCACCATATAAATCCTCATTCACCTaGATTAGCTCAACAGTTACA +
Preference number: 4 (lower is better)
Translates to: EYSPSIWRTSLAHSFSPYKSSFT*ISSTVT
Trigger: TGTAACTGTTGAGCTAATTCAGGTGAATGAGGATTT...ATATGGTGAAAATGAATGTGCGAGTGATGTCCGCCATATTGATGGAGAATACTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570965.5
ENST00000571319.5
CDS-3UTR TCA 90 bp GTGGTATTTAATCACGTAATTAAGGAGAACTGTTTAACATCAAGCTCTTCTGCTGCTCTTCTGCTGGTCTaGAAAGACCTGAGTGTTTAT +
Preference number: 4 (lower is better)
Translates to: VVFNHVIKENCLTSSSSAALLLV*KDLSVY
Trigger: ATAAACACTCAGGTCTTTTCAGACCAGCAGAAGAGC...AGCAGAAGAGCTTGATGTTAAACAGTTCTCCTTAATTACGTGATTAAATACCAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570371.5
ENST00000575333.5
CDS-3UTR TCA 90 bp TTTTCCTTCTACATTTCACAACCACTCAGTTCATACCTTGTAATCCCTGAATTTGCTCTTCTGCTGGTCTaGAAAGACCTGAGTGTTTAT +
Preference number: 4 (lower is better)
Translates to: FSFYISQPLSSYLVIPEFALLLV*KDLSVY
Trigger: ATAAACACTCAGGTCTTTTCAGACCAGCAGAAGAGC...AAATTCAGGGATTACAAGGTATGAACTGAGTGGTTGTGAAATGTAGAAGGAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575333.5
CDS-3UTR TCA 90 bp AATCACGTAATTAAGGAGAACTGTTTAACATCAAGCTCTTCTGCTGGTCTGAAAATACCTTGTAATCCCTaGATTTCTCCGCTTGCATCA +
Preference number: 4 (lower is better)
Translates to: NHVIKENCLTSSSSAGLKIPCNP*ISPLAS
Trigger: TGATGCAAGCGGAGAAATTCAGGGATTACAAGGTAT...TTTCAGACCAGCAGAAGAGCTTGATGTTAAACAGTTCTCCTTAATTACGTGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575333.5
CDS-3UTR GCA 90 bp GTATTTAATCACGTAATTAAGGAGAACTGTTTAACATCAAGCTCTTCTGCTGGTCTTCAAAGCTTTCACTaGATCTTTTGGCCCATCCTG +
Preference number: 4 (lower is better)
Translates to: VFNHVIKENCLTSSSSAGLQSFH*IFWPIL
Trigger: CAGGATGGGCCAAAAGATGCAGTGAAAGCTTTGAAG...ACCAGCAGAAGAGCTTGATGTTAAACAGTTCTCCTTAATTACGTGATTAAATAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570371.5
ENST00000575333.5
CDS-3UTR GCA 90 bp TGTAAGAGAACAGTGAAGCAGTATCTTCAAAGGCCTAGAATTTTGTGCCTAGAAAAATCGTACAACACCTaGAGAAGCTCTATGTCTTCA +
Preference number: 4 (lower is better)
Translates to: CKRTVKQYLQRPRILCLEKSYNT*RSSMSS
Trigger: TGAAGACATAGAGCTTCTGCAGGTGTTGTACGATTT...TTCTAGGCACAAAATTCTAGGCCTTTGAAGATACTGCTTCACTGTTCTCTTACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000572405.5
CDS-3UTR CCA 90 bp GTATTTAATCACGTAATTAAGGAGAACTGTTTAACATCAAGCTCTTCTGCTGGTTACAGAAGAAAGAGCTaGTGCAGTAGGGACAGATGT +
Preference number: 4 (lower is better)
Translates to: VFNHVIKENCLTSSSSAGYRRKS*CSRDRC
Trigger: ACATCTGTCCCTACTGCACCAGCTCTTTCTTCTGTA...ACCAGCAGAAGAGCTTGATGTTAAACAGTTCTCCTTAATTACGTGATTAAATAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570371.5
ENST00000575333.5
CDS-3UTR CCA 90 bp ATCAATATGGCGGACATCACTCGCACATTCATTTTCACCATATCCAATTCACTGAACAGTCGAGTTCTTTaGAGCAATTACAGAAGAAAG +
Preference number: 4 (lower is better)
Translates to: INMADITRTFIFTISNSLNSRVL*SNYRRK
Trigger: CTTTCTTCTGTAATTGCTCCAAAGAACTCGACTGTT...CAGTGAATTGGATATGGTGAAAATGAATGTGCGAGTGATGTCCGCCATATTGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570965.5
CDS-3UTR CCA 90 bp CACGTAATTAAGGAGAACTGTTTAACATCAAGCTCTTCTGCTGGTCTGAAAAGATTTTCCAATCTGTTCTaGGACCAATGTAACAGTCGA +
Preference number: 4 (lower is better)
Translates to: HVIKENCLTSSSSAGLKRFSNLF*DQCNSR
Trigger: TCGACTGTTACATTGGTCCCAGAACAGATTGGAAAA...TCTTTTCAGACCAGCAGAAGAGCTTGATGTTAAACAGTTCTCCTTAATTACGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000570371.5
ENST00000575333.5
CDS-3UTR CCA 90 bp GTAATTAAGGAGAACTGTTTAACATCAAGCTCTTCTGCTGGTCTGAAAAGACCTTTTTCCAATCTGTTCTaGGACCAATGTAACAGTCGA +
Preference number: 4 (lower is better)
Translates to: VIKENCLTSSSSAGLKRPFSNLF*DQCNSR
Trigger: TCGACTGTTACATTGGTCCCAGAACAGATTGGAAAA...AGGTCTTTTCAGACCAGCAGAAGAGCTTGATGTTAAACAGTTCTCCTTAATTAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000570371.5
ENST00000575333.5
CDS-3UTR CCA 90 bp AAGGAGAACTGTTTAACATCAAGCTCTTCTGCTGGTCTGAAAAGACCTGAGTGTTCCAAAATCCTTTGTTaGTTTCTAGTAAACCTCTCA +
Preference number: 4 (lower is better)
Translates to: KENCLTSSSSAGLKRPECSKILC*FLVNLS
Trigger: TGAGAGGTTTACTAGAAACCAACAAAGGATTTTGGA...ACACTCAGGTCTTTTCAGACCAGCAGAAGAGCTTGATGTTAAACAGTTCTCCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000570371.5
ENST00000575333.5
CDS-3UTR CCA 90 bp GCAGAAGCTCTATGTCTTCATGGTTTTCAGACCCAGGAGTATTCTCCATCAATATCTGTGGATGAAGACTaGGTTTTAAGTTGTTTGTTA +
Preference number: 4 (lower is better)
Translates to: AEALCLHGFQTQEYSPSISVDED*VLSCLL
Trigger: TAACAAACAACTTAAAACCCAGTCTTCATCCACAGA...TATTGATGGAGAATACTCCTGGGTCTGAAAACCATGAAGACATAGAGCTTCTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571319.5
CDS-3UTR CCA 90 bp ATTAAGGAGAACTGTTTAACATCAAGCTCTTCTGCTGGTCTGAAAAGACCTGAGTTAAGTATTGGCCATTaGGCTGAACAACTTCTACAA +
Preference number: 4 (lower is better)
Translates to: IKENCLTSSSSAGLKRPELSIGH*AEQLLQ
Trigger: TTGTAGAAGTTGTTCAGCCCAATGGCCAATACTTAA...CTCAGGTCTTTTCAGACCAGCAGAAGAGCTTGATGTTAAACAGTTCTCCTTAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575333.5
CDS-3UTR TCA 90 bp GTGGTATTTAATCACGTAATTAAGGAGAACTGTTTAACATCAAGCTCTTCTGCTGGATTTGATGAGATTTaGGCAGTCTCTTGTCTTGCT +
Preference number: 4 (lower is better)
Translates to: VVFNHVIKENCLTSSSSAGFDEI*AVSCLA
Trigger: AGCAAGACAAGAGACTGCTCAAATCTCATCAAATCC...AGCAGAAGAGCTTGATGTTAAACAGTTCTCCTTAATTACGTGATTAAATACCAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570371.5
ENST00000575333.5
CDS-3UTR TCA 90 bp GTAATTAAGGAGAACTGTTTAACATCAAGCTCTTCTGCTGGTCTGAAAAGACCTCTTAAGCCTGAAAGTTaGTTATTCATGGTGTTGAGT +
Preference number: 4 (lower is better)
Translates to: VIKENCLTSSSSAGLKRPLKPES*LFMVLS
Trigger: ACTCAACACCATGAATAATCAACTTTCAGGCTTAAG...AGGTCTTTTCAGACCAGCAGAAGAGCTTGATGTTAAACAGTTCTCCTTAATTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570371.5
ENST00000575333.5
CDS-3UTR TCA 90 bp GACTTTAAAGCCTGTGTTTTTCCTTCTACATTTCACAACCACTCAGTTCATACCCTTAAGCCTGAAAGTTaGTTATTCATGGTGTTGAGT +
Preference number: 4 (lower is better)
Translates to: DFKACVFPSTFHNHSVHTLKPES*LFMVLS
Trigger: ACTCAACACCATGAATAATCAACTTTCAGGCTTAAG...GGTATGAACTGAGTGGTTGTGAAATGTAGAAGGAAAAACACAGGCTTTAAAGTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000575333.5
CDS-3UTR GCA 90 bp TTTTCCTTCTACATTTCACAACCACTCAGTTCATACCTTGTAATCCCTGAATTTCTTGGACCACAGTTCTaGACACACATGTCAATAAGT +
Preference number: 4 (lower is better)
Translates to: FSFYISQPLSSYLVIPEFLGPQF*THMSIS
Trigger: ACTTATTGACATGTGTGTGCAGAACTGTGGTCCAAG...AAATTCAGGGATTACAAGGTATGAACTGAGTGGTTGTGAAATGTAGAAGGAAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575333.5
CDS-3UTR GCA 90 bp TGTAAGAGAACAGTGAAGCAGTATCTTCAAAGGCCTAGAATTTTGTGCCTAGAACAAGCACTCAAAGTTTaGACCAAAGTTTACCAACAT +
Preference number: 4 (lower is better)
Translates to: CKRTVKQYLQRPRILCLEQALKV*TKVYQH
Trigger: ATGTTGGTAAACTTTGGTGCAAACTTTGAGTGCTTG...TTCTAGGCACAAAATTCTAGGCCTTTGAAGATACTGCTTCACTGTTCTCTTACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572405.5
CDS-3UTR CCA 90 bp AAGAGACAAATGAATCCAACTGGAAGTTTCATCGTCTTAAAGTTCCATAAGAAGTTCACAATCAGAGACTaGAAACTTGGACCACAGTTC +
Preference number: 4 (lower is better)
Translates to: KRQMNPTGSFIVLKFHKKFTIRD*KLGPQF
Trigger: GAACTGTGGTCCAAGTTTCCAGTCTCTGATTGTGAA...CTTCTTATGGAACTTTAAGACGATGAAACTTCCAGTTGGATTCATTTGTCTCTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572405.5
CDS-3UTR CCA 90 bp AAGAGACAAATGAATCCAACTGGAAGTTTCATCGTCTTAAAGTTCCATAAGAAGAGCTCTATGTCTTCATaGTTTTCAGACCCAGGAGTA +
Preference number: 4 (lower is better)
Translates to: KRQMNPTGSFIVLKFHKKSSMSS*FSDPGV
Trigger: TACTCCTGGGTCTGAAAACCATGAAGACATAGAGCT...CTTCTTATGGAACTTTAAGACGATGAAACTTCCAGTTGGATTCATTTGTCTCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572405.5
CDS-3UTR CCA 90 bp TTTAATCACGTAATTAAGGAGAACTGTTTAACATCAAGCTCTTCTGCTGGTCTGCTTTGTAATGTAGGTTaGAATCTGAGAAGCCCAACA +
Preference number: 4 (lower is better)
Translates to: FNHVIKENCLTSSSSAGLLCNVG*NLRSPT
Trigger: TGTTGGGCTTCTCAGATTCCAACCTACATTACAAAG...CAGACCAGCAGAAGAGCTTGATGTTAAACAGTTCTCCTTAATTACGTGATTAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570371.5
CDS-3UTR TCA 90 bp AATCACGTAATTAAGGAGAACTGTTTAACATCAAGCTCTTCTGCTGGTCTGAAAAAATCCTCATTCACCTaGATTAGCTCAACAGTTACA +
Preference number: 4 (lower is better)
Translates to: NHVIKENCLTSSSSAGLKKSSFT*ISSTVT
Trigger: TGTAACTGTTGAGCTAATTCAGGTGAATGAGGATTT...TTTCAGACCAGCAGAAGAGCTTGATGTTAAACAGTTCTCCTTAATTACGTGATT
37% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000570371.5
ENST00000575333.5
CDS-3UTR TCA 90 bp AATCACGTAATTAAGGAGAACTGTTTAACATCAAGCTCTTCTGCTGGTCTGAAATGGTCTGAAAAGACCTaGGTGTTTATTTACTTAAGC +
Preference number: 4 (lower is better)
Translates to: NHVIKENCLTSSSSAGLKWSEKT*VFIYLS
Trigger: GCTTAAGTAAATAAACACTCAGGTCTTTTCAGACCA...TTTCAGACCAGCAGAAGAGCTTGATGTTAAACAGTTCTCCTTAATTACGTGATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570371.5
ENST00000575333.5
CDS-3UTR TCA 90 bp AAGAGACAAATGAATCCAACTGGAAGTTTCATCGTCTTAAAGTTCCATAAGAAGAGTTTAGAAATCAACTaGAATCAGGATGTAGGAGGA +
Preference number: 4 (lower is better)
Translates to: KRQMNPTGSFIVLKFHKKSLEIN*NQDVGG
Trigger: TCCTCCTACATCCTGATTTCAGTTGATTTCTAAACT...CTTCTTATGGAACTTTAAGACGATGAAACTTCCAGTTGGATTCATTTGTCTCTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572405.5
CDS-3UTR GCA 90 bp AATCACGTAATTAAGGAGAACTGTTTAACATCAAGCTCTTCTGCTGGTCTGAAAAGCTATTTCAGATGTTaGCGTTTATCAACTTCCTTA +
Preference number: 4 (lower is better)
Translates to: NHVIKENCLTSSSSAGLKSYFRC*RLSTSL
Trigger: TAAGGAAGTTGATAAACGGCAACATCTGAAATAGCT...TTTCAGACCAGCAGAAGAGCTTGATGTTAAACAGTTCTCCTTAATTACGTGATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570371.5
CDS-3UTR GCA 90 bp AAAAACCCAATGATAATAGTGTGTAGGTTCACAGTAGACTTTAAGTATTGGCCACCTTATTTTGTAATTTaGCAAACCCTTGCTGGGAAT +
Preference number: 4 (lower is better)
Translates to: KNPMIIVCRFTVDFKYWPPYFVI*QTLAGN
Trigger: ATTCCCAGCAAGGGTTTGGCAAATTACAAAATAAGG...TGGCCAATACTTAAAGTCTACTGTGAACCTACACACTATTATCATTGGGTTTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000575333.5
CDS-3UTR CCA 90 bp GTGGTATTTAATCACGTAATTAAGGAGAACTGTTTAACATCAAGCTCTTCTGCTAACAGTCGAGTTCTTTaGAGCAATTACAGAAGAAAG +
Preference number: 4 (lower is better)
Translates to: VVFNHVIKENCLTSSSSANSRVL*SNYRRK
Trigger: CTTTCTTCTGTAATTGCTCCAAAGAACTCGACTGTT...AGCAGAAGAGCTTGATGTTAAACAGTTCTCCTTAATTACGTGATTAAATACCAC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570371.5
ENST00000575333.5
CDS-3UTR CCA 90 bp GTATTTAATCACGTAATTAAGGAGAACTGTTTAACATCAAGCTCTTCTGCTGGTACTGGCATTTCAACTTaGACTTCTCTGACTTTAAAG +
Preference number: 4 (lower is better)
Translates to: VFNHVIKENCLTSSSSAGTGIST*TSLTLK
Trigger: CTTTAAAGTCAGAGAAGTCCAAGTTGAAATGCCAGT...ACCAGCAGAAGAGCTTGATGTTAAACAGTTCTCCTTAATTACGTGATTAAATAC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575333.5
CDS-3UTR CCA 90 bp GTATTTAATCACGTAATTAAGGAGAACTGTTTAACATCAAGCTCTTCTGCTGGTTCCAAAATCCTTTGTTaGTTTCTAGTAAACCTCTCA +
Preference number: 4 (lower is better)
Translates to: VFNHVIKENCLTSSSSAGSKILC*FLVNLS
Trigger: TGAGAGGTTTACTAGAAACCAACAAAGGATTTTGGA...ACCAGCAGAAGAGCTTGATGTTAAACAGTTCTCCTTAATTACGTGATTAAATAC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570371.5
ENST00000575333.5
CDS-3UTR CCA 90 bp AAGAGACAAATGAATCCAACTGGAAGTTTCATCGTCTTAAAGTTCCATAAGAAGTTAAGCTTCTTAACTTaGCAACAAAGGGACTTAGAA +
Preference number: 4 (lower is better)
Translates to: KRQMNPTGSFIVLKFHKKLSFLT*QQRDLE
Trigger: TTCTAAGTCCCTTTGTTGCCAAGTTAAGAAGCTTAA...CTTCTTATGGAACTTTAAGACGATGAAACTTCCAGTTGGATTCATTTGTCTCTT
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572405.5
CDS GCA 90 bp CGCCCAGCGCACCTGCAGCGCGCCCTGCGGGACCCGCGAGGAGGCTaGGCTGCCGGCTGCAGGTGGTACAGGCGGGTAGTGGCGGGTGTA +
Preference number: 5 (lower is better)
Translates to: RPAHLQRALRDPRGG*AAGCRWYRRVVAGV
Trigger: TACACCCGCCACTACCCGCCTGTACCACCTGCAGCCGGCAGCGCAGCCTCCTCGCGGGTCCCGCAGGGCGCGCTGCAGGTGCGCTGGGCG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570371.5
CDS GCA 90 bp CTCCTCCTCTTCGCCCGAGCGCTTCCCGGGCTCTGGCAGAGGCGGTaGGTTCTGCGCTGCCGCTGCGGGGCGCGGGCACCGAGCGTGAGG +
Preference number: 5 (lower is better)
Translates to: LLLFARALPGLWQRR*VLRCRCGARAPSVR
Trigger: CCTCACGCTCGGTGCCCGCGCCCCGCAGCGGCAGCGCAGAACGCACCGCCTCTGCCAGAGCCCGGGAAGCGCTCGGGCGAAGAGGAGGAG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570371.5
CDS CCA 90 bp CGGTACCCTTGGCTCCTCCTCTTCGCCCGAGCGCTTCCCGGGCTCTaGCAGAGGCGGTGCGTTCTGCGCTGCCGCTGCGGGGCGCGGGCA +
Preference number: 5 (lower is better)
Translates to: RYPWLLLFARALPGL*QRRCVLRCRCGARA
Trigger: TGCCCGCGCCCCGCAGCGGCAGCGCAGAACGCACCGCCTCTGCCAGAGCCCGGGAAGCGCTCGGGCGAAGAGGAGGAGCCAAGGGTACCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570371.5
CDS GCA 90 bp CTGCAGCGCGCCCTGCGGGACCCGCGAGGAGGCTGCGCTGCCGGCTaGAGGTGGTACAGGCGGGTAGTGGCGGGTGTATGGAGCCTGCGA +
Preference number: 5 (lower is better)
Translates to: LQRALRDPRGGCAAG*RWYRRVVAGVWSLR
Trigger: TCGCAGGCTCCATACACCCGCCACTACCCGCCTGTACCACCTGCAGCCGGCAGCGCAGCCTCCTCGCGGGTCCCGCAGGGCGCGCTGCAG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570371.5
CDS CCA 90 bp TGCGCTGCCGGCTGCAGGTGGTACAGGCGGGTAGTGGCGGGTGTATaGAGCCTGCGAGAGTGGCGCGGCCGCCCGCTCGGATCCCAGGTG +
Preference number: 5 (lower is better)
Translates to: CAAGCRWYRRVVAGV*SLREWRGRPLGSQV
Trigger: CACCTGGGATCCGAGCGGGCGGCCGCGCCACTCTCGCAGGCTCCATACACCCGCCACTACCCGCCTGTACCACCTGCAGCCGGCAGCGCA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570371.5
CDS CCA 90 bp AGGTGGTACAGGCGGGTAGTGGCGGGTGTATGGAGCCTGCGAGAGTaGCGCGGCCGCCCGCTCGGATCCCAGGTGGGCTTTTCGCCCCGT +
Preference number: 5 (lower is better)
Translates to: RWYRRVVAGVWSLRE*RGRPLGSQVGFSPR
Trigger: ACGGGGCGAAAAGCCCACCTGGGATCCGAGCGGGCGGCCGCGCCACTCTCGCAGGCTCCATACACCCGCCACTACCCGCCTGTACCACCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570371.5
CDS CCA 90 bp TATGGAGCCTGCGAGAGTGGCGCGGCCGCCCGCTCGGATCCCAGGTaGGCTTTTCGCCCCGTGCAGGAGGAGCAGGCAGCCCAGAATCTC +
Preference number: 5 (lower is better)
Translates to: YGACESGAAARSDPR*AFRPVQEEQAAQNL
Trigger: GAGATTCTGGGCTGCCTGCTCCTCCTGCACGGGGCGAAAAGCCCACCTGGGATCCGAGCGGGCGGCCGCGCCACTCTCGCAGGCTCCATA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570371.5
CDS CCA 90 bp TCCTGCCGCTTGCTGGGCACCTTGTCATTCTTCTCTGCGCCTCTTTaGCTGCCCTTTGTCCTAGAGATCCGGGAGGGGAGGTGTGCGCCC +
Preference number: 5 (lower is better)
Translates to: SCRLLGTLSFFSAPL*LPFVLEIREGRCAP
Trigger: GGGCGCACACCTCCCCTCCCGGATCTCTAGGACAAAGGGCAGCCAAAGAGGCGCAGAGAAGAATGACAAGGTGCCCAGCAAGCGGCAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570371.5
CDS CCA 90 bp TTTTCGCCCCGTGCAGGAGGAGCAGGCAGCCCAGAATCTCCAGCCTaGGAATTAGAGACCCAGGCTTTGATCCTGCCGCTTGCTGGGCAC +
Preference number: 5 (lower is better)
Translates to: FSPRAGGAGSPESPA*ELETQALILPLAGH
Trigger: GTGCCCAGCAAGCGGCAGGATCAAAGCCTGGGTCTCTAATTCCCAGGCTGGAGATTCTGGGCTGCCTGCTCCTCCTGCACGGGGCGAAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570371.5
CDS TCA 90 bp AGAAGTTTCTGGTGTCTCCTCGTGGAGGCCCAAACACTCCATGCCTaGCTCCCGCGGTTCACCTGTTTGGTTCCACTCCCCAGGCGGCAT +
Preference number: 5 (lower is better)
Translates to: RSFWCLLVEAQTLHA*LPRFTCLVPLPRRH
Trigger: ATGCCGCCTGGGGAGTGGAACCAAACAGGTGAACCGCGGGAGTCAGGCATGGAGTGTTTGGGCCTCCACGAGGAGACACCAGAAACTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573607.5
CDS GCA 90 bp CAGGCTTTGATCCTGCCGCTTGCTGGGCACCTTGTCATTCTTCTCTaGGCCTCTTTGGCTGCCCTTTGTCCTAGAGATCCGGGAGGGGAG +
Preference number: 5 (lower is better)
Translates to: QALILPLAGHLVILL*ASLAALCPRDPGGE
Trigger: CTCCCCTCCCGGATCTCTAGGACAAAGGGCAGCCAAAGAGGCGCAGAGAAGAATGACAAGGTGCCCAGCAAGCGGCAGGATCAAAGCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570371.5
CDS GCA 90 bp TTCGAGAAGTTTCTGGTGTCTCCTCGTGGAGGCCCAAACACTCCATaGCTGACTCCCGCGGTTCACCTGTTTGGTTCCACTCCCCAGGCG +
Preference number: 5 (lower is better)
Translates to: FEKFLVSPRGGPNTP*LTPAVHLFGSTPQA
Trigger: CGCCTGGGGAGTGGAACCAAACAGGTGAACCGCGGGAGTCAGGCATGGAGTGTTTGGGCCTCCACGAGGAGACACCAGAAACTTCTCGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573607.5
CDS CCA 90 bp TCCAGCCTGGGAATTAGAGACCCAGGCTTTGATCCTGCCGCTTGCTaGGCACCTTGTCATTCTTCTCTGCGCCTCTTTGGCTGCCCCTCG +
Preference number: 5 (lower is better)
Translates to: SSLGIRDPGFDPAAC*APCHSSLRLFGCPS
Trigger: CGAGGGGCAGCCAAAGAGGCGCAGAGAAGAATGACAAGGTGCCCAGCAAGCGGCAGGATCAAAGCCTGGGTCTCTAATTCCCAGGCTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574744.1
CDS GCA 90 bp TGCCCCTCGACCTGCCTTTGTCCTAGAGATCCGGGAGGGGAGGTGTaGGCCCTGCCCTTTAAAGTTGTGGTCATGTCTAGGAGGAAGGAT +
Preference number: 5 (lower is better)
Translates to: CPSTCLCPRDPGGEV*ALPFKVVVMSRRKD
Trigger: ATCCTTCCTCCTAGACATGACCACAACTTTAAAGGGCAGGGCGCACACCTCCCCTCCCGGATCTCTAGGACAAAGGCAGGTCGAGGGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574744.1
CDS GCA 90 bp CAGGCTTTGATCCTGCCGCTTGCTGGGCACCTTGTCATTCTTCTCTaGGCCTCTTTGGCTGCCCCTCGACCTGCCTTTGTCCTAGAGATC +
Preference number: 5 (lower is better)
Translates to: QALILPLAGHLVILL*ASLAAPRPAFVLEI
Trigger: GATCTCTAGGACAAAGGCAGGTCGAGGGGCAGCCAAAGAGGCGCAGAGAAGAATGACAAGGTGCCCAGCAAGCGGCAGGATCAAAGCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574744.1
CDS GCA 90 bp ATCTCCAGCCTGGGAATTAGAGACCCAGGCTTTGATCCTGCCGCTTaGTGGGCACCTTGTCATTCTTCTCTGCGCCTCTTTGGCTGCCCC +
Preference number: 5 (lower is better)
Translates to: ISSLGIRDPGFDPAA*WAPCHSSLRLFGCP
Trigger: GGGGCAGCCAAAGAGGCGCAGAGAAGAATGACAAGGTGCCCAGCAAGCGGCAGGATCAAAGCCTGGGTCTCTAATTCCCAGGCTGGAGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574744.1
CDS GCA 90 bp TGGCTGCCCTTTGTCCTAGAGATCCGGGAGGGGAGGTGTGCGCCCTaGCCTTTAAAGTTGTGGTCATGTCTAGGAGGAAGGATTGGCTTC +
Preference number: 5 (lower is better)
Translates to: WLPFVLEIREGRCAP*PLKLWSCLGGRIGF
Trigger: GAAGCCAATCCTTCCTCCTAGACATGACCACAACTTTAAAGGGCAGGGCGCACACCTCCCCTCCCGGATCTCTAGGACAAAGGGCAGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570371.5
CDS GCA 90 bp GCCTCTTTGGCTGCCCTTTGTCCTAGAGATCCGGGAGGGGAGGTGTaGGCCCTGCCCTTTAAAGTTGTGGTCATGTCTAGGAGGAAGGAT +
Preference number: 5 (lower is better)
Translates to: ASLAALCPRDPGGEV*ALPFKVVVMSRRKD
Trigger: ATCCTTCCTCCTAGACATGACCACAACTTTAAAGGGCAGGGCGCACACCTCCCCTCCCGGATCTCTAGGACAAAGGGCAGCCAAAGAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570371.5
CDS GCA 90 bp ATCTCCAGCCTGGGAATTAGAGACCCAGGCTTTGATCCTGCCGCTTaGTGGGCACCTTGTCATTCTTCTCTGCGCCTCTTTGGCTGCCCT +
Preference number: 5 (lower is better)
Translates to: ISSLGIRDPGFDPAA*WAPCHSSLRLFGCP
Trigger: AGGGCAGCCAAAGAGGCGCAGAGAAGAATGACAAGGTGCCCAGCAAGCGGCAGGATCAAAGCCTGGGTCTCTAATTCCCAGGCTGGAGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570371.5
CDS GCA 90 bp CGACCTGCCTTTGTCCTAGAGATCCGGGAGGGGAGGTGTGCGCCCTaGCCTTTAAAGTTGTGGTCATGTCTAGGAGGAAGGATTGGCTTC +
Preference number: 5 (lower is better)
Translates to: RPAFVLEIREGRCAP*PLKLWSCLGGRIGF
Trigger: GAAGCCAATCCTTCCTCCTAGACATGACCACAACTTTAAAGGGCAGGGCGCACACCTCCCCTCCCGGATCTCTAGGACAAAGGCAGGTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574744.1
CDS CCA 90 bp TCCAGCCTGGGAATTAGAGACCCAGGCTTTGATCCTGCCGCTTGCTaGGCACCTTGTCATTCTTCTCTGCGCCTCTTTGGCTGCCCTTTG +
Preference number: 5 (lower is better)
Translates to: SSLGIRDPGFDPAAC*APCHSSLRLFGCPL
Trigger: CAAAGGGCAGCCAAAGAGGCGCAGAGAAGAATGACAAGGTGCCCAGCAAGCGGCAGGATCAAAGCCTGGGTCTCTAATTCCCAGGCTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570371.5
CDS TCA 90 bp TTGGCGATGTTAACAATCTCCAGCCAGCAGGAGCCTGCCAGAGAGTaGGGTGTCCCCAGGCGATGTCAGATAGCCATAGATGAGCTCCTG +
Preference number: 5 (lower is better)
Translates to: LAMLTISSQQEPARE*GVPRRCQIAIDELL
Trigger: CAGGAGCTCATCTATGGCTATCTGACATCGCCTGGGGACACCTCACTCTCTGGCAGGCTCCTGCTGGCTGGAGATTGTTAACATCGCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570371.5
CDS CCA 90 bp CTAGAGATCCGGGAGGGGAGGTGTGCGCCCTGCCCTTTAAAGTTGTaGTCATGTCTAGGAGGAAGGATTGGCTTCGAATTTAGGGCTTCC +
Preference number: 5 (lower is better)
Translates to: LEIREGRCAPCPLKL*SCLGGRIGFEFRAS
Trigger: GGAAGCCCTAAATTCGAAGCCAATCCTTCCTCCTAGACATGACCACAACTTTAAAGGGCAGGGCGCACACCTCCCCTCCCGGATCTCTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570371.5
ENST00000574744.1
CDS-3UTR CAA 90 bp AAACTGAACGCCTTTCTTAACCAGGTCGAGGTATACTTCTTTGACTTCGCTTACACCCGCTCGGTACCCTaGGCTCCTCCTCTTCGCCCG +
Preference number: 5 (lower is better)
Translates to: KLNAFLNQVEVYFFDFAYTRSVP*APPLRP
Trigger: CGGGCGAAGAGGAGGAGCCAAGGGTACCGAGCGGGT...GTAAGCGAAGTCAAAGAAGTATACCTCGACCTGGTTAAGAAAGGCGTTCAGTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570965.5
CDS-3UTR CAA 90 bp AGCTCAACAGTTACATCTTCGTTCTCCACCACCACAAGCAGGTCCATGATCCTCGTTTTGGCTGGTCCTTaGGGCAAACGGGGGTATCTC +
Preference number: 5 (lower is better)
Translates to: SSTVTSSFSTTTSRSMILVLAGP*GKRGYL
Trigger: GAGATACCCCCGTTTGCCCAAAGGACCAGCCAAAAC...GAGGATCATGGACCTGCTTGTGGTGGTGGAGAACGAAGATGTAACTGTTGAGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000571319.5
CDS-3UTR CAA 90 bp AGCTCAACAGTTACATCTTCGTTCTCCACCACCACAAGCAGGTCCATGATCCTCGTGGCAGACTCTGGTTaGATGGTGCTGCTGCAATGG +
Preference number: 5 (lower is better)
Translates to: SSTVTSSFSTTTSRSMILVADSG*MVLLQW
Trigger: CCATTGCAGCAGCACCATCAAACCAGAGTCTGCCAC...GAGGATCATGGACCTGCTTGTGGTGGTGGAGAACGAAGATGTAACTGTTGAGCT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571319.5
CDS-3UTR CAA 90 bp ACTTCTTTGACTTCGCTTACATCCACACCTCCTGGGAAGCCCTGTGACCAAGTCGAGCAGTCTCTTGTCTaGCTGTTTCAGCCTCTGCTT +
Preference number: 5 (lower is better)
Translates to: TSLTSLTSTPPGKPCDQVEQSLV*LFQPLL
Trigger: AAGCAGAGGCTGAAACAGCAAGACAAGAGACTGCTC...GACTTGGTCACAGGGCTTCCCAGGAGGTGTGGATGTAAGCGAAGTCAAAGAAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570965.5
ENST00000572360.5
CDS-3UTR CAA 90 bp TTGCCTGTTAGTAAATGGGTCATAAATATGGCCTATGAGCCGGGCACAGTGGCTGGCTCACTGGTAGTATaGGTGGCTTCCTTCTGGTTC +
Preference number: 5 (lower is better)
Translates to: LPVSKWVINMAYEPGTVAGSLVV*VASFWF
Trigger: GAACCAGAAGGAAGCCACCAATACTACCAGTGAGCC...AGCCACTGTGCCCGGCTCATAGGCCATATTTATGACCCATTTACTAACAGGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576932.5
CDS-3UTR CAA 90 bp TTTAATCACGTAATTAAGGAGAACTGTTTAACATCAAGCTCTTCTGCTGGTCTGACCCGCTCGGTACCCTaGGCTCCTCCTCTTCGCCCG +
Preference number: 5 (lower is better)
Translates to: FNHVIKENCLTSSSSAGLTRSVP*APPLRP
Trigger: CGGGCGAAGAGGAGGAGCCAAGGGTACCGAGCGGGT...CAGACCAGCAGAAGAGCTTGATGTTAAACAGTTCTCCTTAATTACGTGATTAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570371.5
CDS-3UTR CAA 90 bp TCATGCAGGTCTAAATGCCCTGTCTACTTGTTCCTCTATAGCTCGAGCATTGCCTCAGAGACTGGAAACTaGGACCACAGTTCTGCACAC +
Preference number: 5 (lower is better)
Translates to: SCRSKCPVYLFLYSSSIASETGN*DHSSAH
Trigger: GTGTGCAGAACTGTGGTCCAAGTTTCCAGTCTCTGA...GGCAATGCTCGAGCTATAGAGGAACAAGTAGACAGGGCATTTAGACCTGCATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572405.5
CDS-3UTR CAA 90 bp TCATGCAGGTCTAAATGCCCTGTCTACTTGTTCCTCTATAGCTCGAGCATTGCCGAGCAGTCTCTTGTCTaGCTGTTTCAGCCTCTGCTT +
Preference number: 5 (lower is better)
Translates to: SCRSKCPVYLFLYSSSIAEQSLV*LFQPLL
Trigger: AAGCAGAGGCTGAAACAGCAAGACAAGAGACTGCTC...GGCAATGCTCGAGCTATAGAGGAACAAGTAGACAGGGCATTTAGACCTGCATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572405.5
CDS-3UTR CAA 90 bp TTGCCTGTTAGTAAATGGGTCATAAATATGGCCTATGAGCCGGGCACAGTGGCTGAGCAGTCTCTTGTCTaGCTGTTTCAGCCTCTGCTT +
Preference number: 5 (lower is better)
Translates to: LPVSKWVINMAYEPGTVAEQSLV*LFQPLL
Trigger: AAGCAGAGGCTGAAACAGCAAGACAAGAGACTGCTC...AGCCACTGTGCCCGGCTCATAGGCCATATTTATGACCCATTTACTAACAGGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576932.5
CDS-3UTR CAA 90 bp GGGGCAGAAGGCTCACTGGTAGTATTGGTGGCTTCCTTCTGGTTCTTATTTTGCTCAGTCACCATCATTTaGAGCTCCTTTGTGCTGGTG +
Preference number: 5 (lower is better)
Translates to: GAEGSLVVLVASFWFLFCSVTII*SSFVLV
Trigger: CACCAGCACAAAGGAGCTCAAAATGATGGTGACTGA...GCAAAATAAGAACCAGAAGGAAGCCACCAATACTACCAGTGAGCCTTCTGCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571319.5
CDS CCA 90 bp TTCCAGCCTGATTCTAAAAACGGGAGAGGGGCTTTCCGTTTCTTCTaGCAAGGAGTATGCTTGGCTTTAGGCCTGCTTTGTAATGTAGGT +
Preference number: 5 (lower is better)
Translates to: FQPDSKNGRGAFRFF*QGVCLALGLLCNVG
Trigger: ACCTACATTACAAAGCAGGCCTAAAGCCAAGCATACTCCTTGCCAGAAGAAACGGAAAGCCCCTCTCCCGTTTTTAGAATCAGGCTGGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000570371.5
ENST00000574744.1
CDS-3UTR CAA 90 bp TCACCTGAATTAGCTCAACAGTTACATCTTCGTTCTCCACCACCACAAGCAGGTTCAGAGACTGGAAACTaGGACCACAGTTCTGCACAC +
Preference number: 5 (lower is better)
Translates to: SPELAQQLHLRSPPPQAGSETGN*DHSSAH
Trigger: GTGTGCAGAACTGTGGTCCAAGTTTCCAGTCTCTGA...ACCTGCTTGTGGTGGTGGAGAACGAAGATGTAACTGTTGAGCTAATTCAGGTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570965.5
ENST00000571319.5
CDS-3UTR CAA 90 bp TTGCCTGTTAGTAAATGGGTCATAAATATGGCCTATGAGCCGGGCACAGTGGCTGATTTGAGCAGTCTCTaGTCTTGCTGTTTCAGCCTC +
Preference number: 5 (lower is better)
Translates to: LPVSKWVINMAYEPGTVADLSSL*SCCFSL
Trigger: GAGGCTGAAACAGCAAGACAAGAGACTGCTCAAATC...AGCCACTGTGCCCGGCTCATAGGCCATATTTATGACCCATTTACTAACAGGCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576932.5
CDS-3UTR CAA 90 bp ATTAAGGAGAACTGTTTAACATCAAGCTCTTCTGCTGGTCTGAAAAGACCTGAGTTAGAGACCCAGGCTTaGATCCTGCCGCTTGCTGGG +
Preference number: 5 (lower is better)
Translates to: IKENCLTSSSSAGLKRPELETQA*ILPLAG
Trigger: CCCAGCAAGCGGCAGGATCAAAGCCTGGGTCTCTAA...CTCAGGTCTTTTCAGACCAGCAGAAGAGCTTGATGTTAAACAGTTCTCCTTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570371.5
CDS-3UTR CAA 90 bp AGTTTCTGCAGAAGCTCTATGTCTTCATGGTTTTCAGACCCAGGAGTATTCTCCTCAGAGACTGGAAACTaGGACCACAGTTCTGCACAC +
Preference number: 5 (lower is better)
Translates to: SFCRSSMSSWFSDPGVFSSETGN*DHSSAH
Trigger: GTGTGCAGAACTGTGGTCCAAGTTTCCAGTCTCTGA...GGAGAATACTCCTGGGTCTGAAAACCATGAAGACATAGAGCTTCTGCAGAAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570965.5
ENST00000571319.5
CDS-3UTR CAA 90 bp ACAGAAGAAAGAGCTGGTGCAGTAGGGACAGATGTTGGAGGATTTGATGAGATTTCAGAGACTGGAAACTaGGACCACAGTTCTGCACAC +
Preference number: 5 (lower is better)
Translates to: TEERAGAVGTDVGGFDEISETGN*DHSSAH
Trigger: GTGTGCAGAACTGTGGTCCAAGTTTCCAGTCTCTGA...AATCTCATCAAATCCTCCAACATCTGTCCCTACTGCACCAGCTCTTTCTTCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570965.5
ENST00000572360.5
CDS-3UTR CAA 90 bp ACAGAAGAAAGAGCTGGTGCAGTAGGGACAGATGTTGGAGGATTTGATGAGATTGAGCAGTCTCTTGTCTaGCTGTTTCAGCCTCTGCTT +
Preference number: 5 (lower is better)
Translates to: TEERAGAVGTDVGGFDEIEQSLV*LFQPLL
Trigger: AAGCAGAGGCTGAAACAGCAAGACAAGAGACTGCTC...AATCTCATCAAATCCTCCAACATCTGTCCCTACTGCACCAGCTCTTTCTTCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570965.5
ENST00000572360.5
CDS-3UTR CAA 90 bp AAGGAGAACTGTTTAACATCAAGCTCTTCTGCTGGTCTGAAAAGACCTGAGTGTGGCTCACTGGTAGTATaGGTGGCTTCCTTCTGGTTC +
Preference number: 5 (lower is better)
Translates to: KENCLTSSSSAGLKRPECGSLVV*VASFWF
Trigger: GAACCAGAAGGAAGCCACCAATACTACCAGTGAGCC...ACACTCAGGTCTTTTCAGACCAGCAGAAGAGCTTGATGTTAAACAGTTCTCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570371.5
ENST00000575333.5
CDS-3UTR CAA 90 bp AAACTGAACGCCTTTCTTAACCAGGTCGAGGTATACTTCTTTGACTTCGCTTACGGCTCACTGGTAGTATaGGTGGCTTCCTTCTGGTTC +
Preference number: 5 (lower is better)
Translates to: KLNAFLNQVEVYFFDFAYGSLVV*VASFWF
Trigger: GAACCAGAAGGAAGCCACCAATACTACCAGTGAGCC...GTAAGCGAAGTCAAAGAAGTATACCTCGACCTGGTTAAGAAAGGCGTTCAGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571319.5
CDS-3UTR CAA 90 bp TTGCCTGTTAGTAAATGGGTCATAAATATGGCCTATGAGCCGGGCACAGTGGCTATGTCTAATGGCAAGTaGTATCTGGGATTCAGTAGC +
Preference number: 5 (lower is better)
Translates to: LPVSKWVINMAYEPGTVAMSNGK*YLGFSS
Trigger: GCTACTGAATCCCAGATACAACTTGCCATTAGACAT...AGCCACTGTGCCCGGCTCATAGGCCATATTTATGACCCATTTACTAACAGGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576932.5
CDS-3UTR CAA 90 bp TTGCCTGTTAGTAAATGGGTCATAAATATGGCCTATGAGCCGGGCACAGTGGCTTCGAGGTATACTTCTTaGACTTCGCTTACATCCACA +
Preference number: 5 (lower is better)
Translates to: LPVSKWVINMAYEPGTVASRYTS*TSLTST
Trigger: TGTGGATGTAAGCGAAGTCAAAGAAGTATACCTCGA...AGCCACTGTGCCCGGCTCATAGGCCATATTTATGACCCATTTACTAACAGGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576932.5
CDS-3UTR CAA 90 bp ACAGAAGAAAGAGCTGGTGCAGTAGGGACAGATGTTGGAGGATTTGATGAGATTGATTTGAGCAGTCTCTaGTCTTGCTGTTTCAGCCTC +
Preference number: 5 (lower is better)
Translates to: TEERAGAVGTDVGGFDEIDLSSL*SCCFSL
Trigger: GAGGCTGAAACAGCAAGACAAGAGACTGCTCAAATC...AATCTCATCAAATCCTCCAACATCTGTCCCTACTGCACCAGCTCTTTCTTCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570965.5
ENST00000572360.5
CDS-3UTR CAA 90 bp AAGCACTCAAAGTTTGCACCAAAGTTTACCAACATGGGTGTACTGCAGCAAGGAGATTTGAGCAGTCTCTaGTCTTGCTGTTTCAGCCTC +
Preference number: 5 (lower is better)
Translates to: KHSKFAPKFTNMGVLQQGDLSSL*SCCFSL
Trigger: GAGGCTGAAACAGCAAGACAAGAGACTGCTCAAATC...TCCTTGCTGCAGTACACCCATGTTGGTAAACTTTGGTGCAAACTTTGAGTGCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572405.5
CDS-3UTR CAA 90 bp TTGCCTGTTAGTAAATGGGTCATAAATATGGCCTATGAGCCGGGCACAGTGGCTCAGATGTTGGAGGATTaGATGAGATTTGAGCAGTCT +
Preference number: 5 (lower is better)
Translates to: LPVSKWVINMAYEPGTVAQMLED*MRFEQS
Trigger: AGACTGCTCAAATCTCATCAAATCCTCCAACATCTG...AGCCACTGTGCCCGGCTCATAGGCCATATTTATGACCCATTTACTAACAGGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576932.5
CDS-3UTR CAA 90 bp AGTTTCTGCAGAAGCTCTATGTCTTCATGGTTTTCAGACCCAGGAGTATTCTCCGCTGGAGATCACTTTTaGTCATCGCTGGATGATTGC +
Preference number: 5 (lower is better)
Translates to: SFCRSSMSSWFSDPGVFSAGDHF*SSLDDC
Trigger: GCAATCATCCAGCGATGACAAAAAGTGATCTCCAGC...GGAGAATACTCCTGGGTCTGAAAACCATGAAGACATAGAGCTTCTGCAGAAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571319.5
CDS-3UTR CAA 90 bp TTGCCTGTTAGTAAATGGGTCATAAATATGGCCTATGAGCCGGGCACAGTGGCTCTCCAAAATCCTTTGTaGGTTTCTAGTAAACCTCTC +
Preference number: 5 (lower is better)
Translates to: LPVSKWVINMAYEPGTVALQNPL*VSSKPL
Trigger: GAGAGGTTTACTAGAAACCAACAAAGGATTTTGGAG...AGCCACTGTGCCCGGCTCATAGGCCATATTTATGACCCATTTACTAACAGGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576932.5
CDS-3UTR CAA 90 bp AGGTATACTTCTTTGACTTCGCTTACATCCACACCTCCTGGGAAGCCCTGTGACTTGCTCCAAAATCCTTaGTTGGTTTCTAGTAAACCT +
Preference number: 5 (lower is better)
Translates to: RYTSLTSLTSTPPGKPCDLLQNP*LVSSKP
Trigger: AGGTTTACTAGAAACCAACAAAGGATTTTGGAGCAA...GTCACAGGGCTTCCCAGGAGGTGTGGATGTAAGCGAAGTCAAAGAAGTATACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571319.5
CDS-3UTR CAA 90 bp CACGTAATTAAGGAGAACTGTTTAACATCAAGCTCTTCTGCTGGTCTGAAAAGAGGCTCACTGGTAGTATaGGTGGCTTCCTTCTGGTTC +
Preference number: 5 (lower is better)
Translates to: HVIKENCLTSSSSAGLKRGSLVV*VASFWF
Trigger: GAACCAGAAGGAAGCCACCAATACTACCAGTGAGCC...TCTTTTCAGACCAGCAGAAGAGCTTGATGTTAAACAGTTCTCCTTAATTACGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570371.5
ENST00000575333.5
CDS-3UTR CAA 90 bp TCATGCAGGTCTAAATGCCCTGTCTACTTGTTCCTCTATAGCTCGAGCATTGCCCTTAAGCTTCTTAACTaGGCAACAAAGGGACTTAGA +
Preference number: 5 (lower is better)
Translates to: SCRSKCPVYLFLYSSSIALKLLN*ATKGLR
Trigger: TCTAAGTCCCTTTGTTGCCAAGTTAAGAAGCTTAAG...GGCAATGCTCGAGCTATAGAGGAACAAGTAGACAGGGCATTTAGACCTGCATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572405.5
CDS-3UTR CAA 90 bp AAGGAGAACTGTTTAACATCAAGCTCTTCTGCTGGTCTGAAAAGACCTGAGTGTATTGCTATACTGGGTTaGACTCAACCATTTGCCGGG +
Preference number: 5 (lower is better)
Translates to: KENCLTSSSSAGLKRPECIAILG*TQPFAG
Trigger: CCCGGCAAATGGTTGAGTCAAACCCAGTATAGCAAT...ACACTCAGGTCTTTTCAGACCAGCAGAAGAGCTTGATGTTAAACAGTTCTCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575333.5
CDS-3UTR CAA 90 bp GTAATTAAGGAGAACTGTTTAACATCAAGCTCTTCTGCTGGTCTGAAAAGACCTAGAGGTCAAAACCAATaGCCATGCACTCCAGGAGGC +
Preference number: 5 (lower is better)
Translates to: VIKENCLTSSSSAGLKRPRGQNQ*PCTPGG
Trigger: GCCTCCTGGAGTGCATGGCAATTGGTTTTGACCTCT...AGGTCTTTTCAGACCAGCAGAAGAGCTTGATGTTAAACAGTTCTCCTTAATTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570371.5
CDS-3UTR CAA 90 bp GTATTTAATCACGTAATTAAGGAGAACTGTTTAACATCAAGCTCTTCTGCTGGTCGCTTGCTGGGCACCTaGTCATTCTTCTCTGCGCCT +
Preference number: 5 (lower is better)
Translates to: VFNHVIKENCLTSSSSAGRLLGT*SFFSAP
Trigger: AGGCGCAGAGAAGAATGACAAGGTGCCCAGCAAGCG...ACCAGCAGAAGAGCTTGATGTTAAACAGTTCTCCTTAATTACGTGATTAAATAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570371.5
CDS-3UTR CAA 90 bp TTGCCTGTTAGTAAATGGGTCATAAATATGGCCTATGAGCCGGGCACAGTGGCTATACTTCTTAGCTTGTaGCCTGTTAGTAAATGGGTC +
Preference number: 5 (lower is better)
Translates to: LPVSKWVINMAYEPGTVAILLSL*PVSKWV
Trigger: GACCCATTTACTAACAGGCAACAAGCTAAGAAGTAT...AGCCACTGTGCCCGGCTCATAGGCCATATTTATGACCCATTTACTAACAGGCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576932.5
CDS TCA 90 bp TTAATTATGTCACAGATGTGCATGAACTGGCCCCAATCTTCAGTCTaGACTCCAGCAAATGTAGCCTTTTCGAGAAGTTTCTGGTGTCTC +
Preference number: 5 (lower is better)
Translates to: LIMSQMCMNWPQSSV*TPANVAFSRSFWCL
Trigger: GAGACACCAGAAACTTCTCGAAAAGGCTACATTTGCTGGAGTTCAGACTGAAGATTGGGGCCAGTTCATGCACATCTGTGACATAATTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000573607.5
CDS-3UTR CAA 90 bp CTGAACGCCTTTCTTAACCAGGTCGAGGTATACTTCTTTGACTTCGCTTACATCATGTCTAATGGCAAGTaGTATCTGGGATTCAGTAGC +
Preference number: 5 (lower is better)
Translates to: LNAFLNQVEVYFFDFAYIMSNGK*YLGFSS
Trigger: GCTACTGAATCCCAGATACAACTTGCCATTAGACAT...GATGTAAGCGAAGTCAAAGAAGTATACCTCGACCTGGTTAAGAAAGGCGTTCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000570965.5
ENST00000571319.5
ENST00000572360.5
CDS-3UTR CAA 90 bp AGTTTCTGCAGAAGCTCTATGTCTTCATGGTTTTCAGACCCAGGAGTATTCTCCTCGAGGTATACTTCTTaGACTTCGCTTACATCCACA +
Preference number: 5 (lower is better)
Translates to: SFCRSSMSSWFSDPGVFSSRYTS*TSLTST
Trigger: TGTGGATGTAAGCGAAGTCAAAGAAGTATACCTCGA...GGAGAATACTCCTGGGTCTGAAAACCATGAAGACATAGAGCTTCTGCAGAAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570965.5
ENST00000571319.5
CDS-3UTR CAA 90 bp AAGCACTCAAAGTTTGCACCAAAGTTTACCAACATGGGTGTACTGCAGCAAGGATCGAGGTATACTTCTTaGACTTCGCTTACATCCACA +
Preference number: 5 (lower is better)
Translates to: KHSKFAPKFTNMGVLQQGSRYTS*TSLTST
Trigger: TGTGGATGTAAGCGAAGTCAAAGAAGTATACCTCGA...TCCTTGCTGCAGTACACCCATGTTGGTAAACTTTGGTGCAAACTTTGAGTGCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572405.5
CDS-3UTR CAA 90 bp ACCATATCCAATTCACTGTGCAGTTTTCCAATCTGTTCTGGGACCAATGTAACAGATTTGAGCAGTCTCTaGTCTTGCTGTTTCAGCCTC +
Preference number: 5 (lower is better)
Translates to: TISNSLCSFPICSGTNVTDLSSL*SCCFSL
Trigger: GAGGCTGAAACAGCAAGACAAGAGACTGCTCAAATC...TGTTACATTGGTCCCAGAACAGATTGGAAAACTGCACAGTGAATTGGATATGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570965.5
CDS-3UTR CAA 90 bp TTCTTAACCAGGTCGAGGTATACTTCTTTGACTTCGCTTACATCCACACCTCCTCAGATGTTGGAGGATTaGATGAGATTTGAGCAGTCT +
Preference number: 5 (lower is better)
Translates to: FLTRSRYTSLTSLTSTPPQMLED*MRFEQS
Trigger: AGACTGCTCAAATCTCATCAAATCCTCCAACATCTG...AGGAGGTGTGGATGTAAGCGAAGTCAAAGAAGTATACCTCGACCTGGTTAAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570965.5
ENST00000572360.5
CDS-3UTR CAA 90 bp TCACCTGAATTAGCTCAACAGTTACATCTTCGTTCTCCACCACCACAAGCAGGTCTCCAAAATCCTTTGTaGGTTTCTAGTAAACCTCTC +
Preference number: 5 (lower is better)
Translates to: SPELAQQLHLRSPPPQAGLQNPL*VSSKPL
Trigger: GAGAGGTTTACTAGAAACCAACAAAGGATTTTGGAG...ACCTGCTTGTGGTGGTGGAGAACGAAGATGTAACTGTTGAGCTAATTCAGGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571319.5
CDS-3UTR CAA 90 bp TTGCCTGTTAGTAAATGGGTCATAAATATGGCCTATGAGCCGGGCACAGTGGCTTTGCTCCAAAATCCTTaGTTGGTTTCTAGTAAACCT +
Preference number: 5 (lower is better)
Translates to: LPVSKWVINMAYEPGTVALLQNP*LVSSKP
Trigger: AGGTTTACTAGAAACCAACAAAGGATTTTGGAGCAA...AGCCACTGTGCCCGGCTCATAGGCCATATTTATGACCCATTTACTAACAGGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576932.5
CDS-3UTR CAA 90 bp TCATGCAGGTCTAAATGCCCTGTCTACTTGTTCCTCTATAGCTCGAGCATTGCCAATCAGAGGACATTTTaGGATATGCAAGCACTCAAA +
Preference number: 5 (lower is better)
Translates to: SCRSKCPVYLFLYSSSIANQRTF*DMQALK
Trigger: TTTGAGTGCTTGCATATCCAAAAATGTCCTCTGATT...GGCAATGCTCGAGCTATAGAGGAACAAGTAGACAGGGCATTTAGACCTGCATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572405.5
CDS-3UTR CAA 90 bp GTAATTAAGGAGAACTGTTTAACATCAAGCTCTTCTGCTGGTCTGAAAAGACCTCGAAGGGGACCTGTTTaGACTTATGTCCGTGGTCTT +
Preference number: 5 (lower is better)
Translates to: VIKENCLTSSSSAGLKRPRRGPV*TYVRGL
Trigger: AAGACCACGGACATAAGTCAAAACAGGTCCCCTTCG...AGGTCTTTTCAGACCAGCAGAAGAGCTTGATGTTAAACAGTTCTCCTTAATTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570371.5
CDS-3UTR CAA 90 bp CACGTAATTAAGGAGAACTGTTTAACATCAAGCTCTTCTGCTGGTCTGAAAAGATGGCAAGGAGTATGCTaGGCTTTAGGCCTGCTTTGT +
Preference number: 5 (lower is better)
Translates to: HVIKENCLTSSSSAGLKRWQGVC*ALGLLC
Trigger: ACAAAGCAGGCCTAAAGCCAAGCATACTCCTTGCCA...TCTTTTCAGACCAGCAGAAGAGCTTGATGTTAAACAGTTCTCCTTAATTACGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570371.5
CDS-3UTR CAA 90 bp GTATTTAATCACGTAATTAAGGAGAACTGTTTAACATCAAGCTCTTCTGCTGGTCCGCCTCGCAAGCTCTaGTTTTCTAACCCCACCTTC +
Preference number: 5 (lower is better)
Translates to: VFNHVIKENCLTSSSSAGPPRKL*FSNPTF
Trigger: GAAGGTGGGGTTAGAAAACAAGAGCTTGCGAGGCGG...ACCAGCAGAAGAGCTTGATGTTAAACAGTTCTCCTTAATTACGTGATTAAATAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570371.5
CDS-3UTR CAA 90 bp GAGTATTCTCCATCAATATGGCGGACATCACTCGCACATTCATTTTCACCATATGCCAAGAAAAAGCTGTaGAGTCTGAGCTATGAGGTG +
Preference number: 5 (lower is better)
Translates to: EYSPSIWRTSLAHSFSPYAKKKL*SLSYEV
Trigger: CACCTCATAGCTCAGACTCAACAGCTTTTTCTTGGC...ATATGGTGAAAATGAATGTGCGAGTGATGTCCGCCATATTGATGGAGAATACTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000570965.5
CDS TCA 90 bp CAGAACCAGAATTTATTTCCTATTCCTTTGCATTCAATTAACATCTaGTTGGCGATGTTAACAATCTCCAGCCAGCAGGAGCCTGCCAGA +
Preference number: 5 (lower is better)
Translates to: QNQNLFPIPLHSINI*LAMLTISSQQEPAR
Trigger: TCTGGCAGGCTCCTGCTGGCTGGAGATTGTTAACATCGCCAATCAGATGTTAATTGAATGCAAAGGAATAGGAAATAAATTCTGGTTCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570371.5
ENST00000574744.1
CDS-3UTR CAA 90 bp AATCACGTAATTAAGGAGAACTGTTTAACATCAAGCTCTTCTGCTGGTCTGAAATCAGAGACTGGAAACTaGGACCACAGTTCTGCACAC +
Preference number: 5 (lower is better)
Translates to: NHVIKENCLTSSSSAGLKSETGN*DHSSAH
Trigger: GTGTGCAGAACTGTGGTCCAAGTTTCCAGTCTCTGA...TTTCAGACCAGCAGAAGAGCTTGATGTTAAACAGTTCTCCTTAATTACGTGATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570371.5
ENST00000575333.5
CDS-3UTR CAA 90 bp AAACTGAACGCCTTTCTTAACCAGGTCGAGGTATACTTCTTTGACTTCGCTTACTCGAGGTATACTTCTTaGACTTCGCTTACATCCACA +
Preference number: 5 (lower is better)
Translates to: KLNAFLNQVEVYFFDFAYSRYTS*TSLTST
Trigger: TGTGGATGTAAGCGAAGTCAAAGAAGTATACCTCGA...GTAAGCGAAGTCAAAGAAGTATACCTCGACCTGGTTAAGAAAGGCGTTCAGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000570965.5
ENST00000571319.5
ENST00000572360.5
CDS-3UTR CAA 90 bp GCAGAAGCTCTATGTCTTCATGGTTTTCAGACCCAGGAGTATTCTCCATCAATACAGATGTTGGAGGATTaGATGAGATTTGAGCAGTCT +
Preference number: 5 (lower is better)
Translates to: AEALCLHGFQTQEYSPSIQMLED*MRFEQS
Trigger: AGACTGCTCAAATCTCATCAAATCCTCCAACATCTG...TATTGATGGAGAATACTCCTGGGTCTGAAAACCATGAAGACATAGAGCTTCTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570965.5
CDS-3UTR CAA 90 bp TCCCATTGCTATACTGGGTTTGACTCAACCATTTGCCGGGAAGTAATCACATCTCTCCAAAATCCTTTGTaGGTTTCTAGTAAACCTCTC +
Preference number: 5 (lower is better)
Translates to: SHCYTGFDSTICREVITSLQNPL*VSSKPL
Trigger: GAGAGGTTTACTAGAAACCAACAAAGGATTTTGGAG...AGATGTGATTACTTCCCGGCAAATGGTTGAGTCAAACCCAGTATAGCAATGGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575333.5
CDS-3UTR CAA 90 bp ATCAATATGGCGGACATCACTCGCACATTCATTTTCACCATATCCAATTCACTGTTCCAATCTCTTGTCTaGCTGTTTCAGCCTCTGCTT +
Preference number: 5 (lower is better)
Translates to: INMADITRTFIFTISNSLFQSLV*LFQPLL
Trigger: AAGCAGAGGCTGAAACAGCAAGACAAGAGATTGGAA...CAGTGAATTGGATATGGTGAAAATGAATGTGCGAGTGATGTCCGCCATATTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571319.5
CDS-3UTR CAA 90 bp GAGTATTCTCCATCAATATGGCGGACATCACTCGCACATTCATTTTCACCATATCAGTTTTCCAATCTCTaGTCTTGCTGTTTCAGCCTC +
Preference number: 5 (lower is better)
Translates to: EYSPSIWRTSLAHSFSPYQFSNL*SCCFSL
Trigger: GAGGCTGAAACAGCAAGACAAGAGATTGGAAAACTG...ATATGGTGAAAATGAATGTGCGAGTGATGTCCGCCATATTGATGGAGAATACTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571319.5
CDS CCA 90 bp ATTCTCTTTAACAAATTCCTTCTTCACAATCAGAGACTGGAAACTTaGACCACAGTTCTGCACACACATGTCAATAAGCCATCCTGGGTA +
Preference number: 5 (lower is better)
Translates to: ILFNKFLLHNQRLET*TTVLHTHVNKPSWV
Trigger: TACCCAGGATGGCTTATTGACATGTGTGTGCAGAACTGTGGTCCAAGTTTCCAGTCTCTGATTGTGAAGAAGGAATTTGTTAAAGAGAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571319.5
CDS-3UTR CAA 90 bp TTTGAATGTTCCAGAAAATTATCATATGCGTGGCTTGAGGTGAGGTTTTGGCTGTCGAGGTATACTTCTTaGACTTCGCTTACATCCACA +
Preference number: 5 (lower is better)
Translates to: FECSRKLSYAWLEVRFWLSRYTS*TSLTST
Trigger: TGTGGATGTAAGCGAAGTCAAAGAAGTATACCTCGA...CAGCCAAAACCTCACCTCAAGCCACGCATATGATAATTTTCTGGAACATTCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571319.5
CDS-3UTR CAA 90 bp GTATTTAATCACGTAATTAAGGAGAACTGTTTAACATCAAGCTCTTCTGCTGGTGAGCAGTCTCTTGTCTaGCTGTTTCAGCCTCTGCTT +
Preference number: 5 (lower is better)
Translates to: VFNHVIKENCLTSSSSAGEQSLV*LFQPLL
Trigger: AAGCAGAGGCTGAAACAGCAAGACAAGAGACTGCTC...ACCAGCAGAAGAGCTTGATGTTAAACAGTTCTCCTTAATTACGTGATTAAATAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570371.5
ENST00000575333.5
CDS-3UTR CAA 90 bp GTGGTATTTAATCACGTAATTAAGGAGAACTGTTTAACATCAAGCTCTTCTGCTGAGCAGTCTCTTGTCTaGCTGTTTCAGCCTCTGCTT +
Preference number: 5 (lower is better)
Translates to: VVFNHVIKENCLTSSSSAEQSLV*LFQPLL
Trigger: AAGCAGAGGCTGAAACAGCAAGACAAGAGACTGCTC...AGCAGAAGAGCTTGATGTTAAACAGTTCTCCTTAATTACGTGATTAAATACCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570371.5
ENST00000575333.5
CDS-3UTR CAA 90 bp AATCACGTAATTAAGGAGAACTGTTTAACATCAAGCTCTTCTGCTGGTCTGAAAGATTTGAGCAGTCTCTaGTCTTGCTGTTTCAGCCTC +
Preference number: 5 (lower is better)
Translates to: NHVIKENCLTSSSSAGLKDLSSL*SCCFSL
Trigger: GAGGCTGAAACAGCAAGACAAGAGACTGCTCAAATC...TTTCAGACCAGCAGAAGAGCTTGATGTTAAACAGTTCTCCTTAATTACGTGATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570371.5
ENST00000575333.5
CDS-3UTR CAA 90 bp ACTTCTATCAGCATTAGTGGGTGTAAGAGAACAGTGAAGCAGTATCTTCAAAGGCAGATGTTGGAGGATTaGATGAGATTTGAGCAGTCT +
Preference number: 5 (lower is better)
Translates to: TSISISGCKRTVKQYLQRQMLED*MRFEQS
Trigger: AGACTGCTCAAATCTCATCAAATCCTCCAACATCTG...CCTTTGAAGATACTGCTTCACTGTTCTCTTACACCCACTAATGCTGATAGAAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572405.5
CDS-3UTR CAA 90 bp GTGGTATTTAATCACGTAATTAAGGAGAACTGTTTAACATCAAGCTCTTCTGCTAGGAGCAGGCCCTCTTaGTCTCTCTACTATTTCCTC +
Preference number: 5 (lower is better)
Translates to: VVFNHVIKENCLTSSSSARSRPS*SLYYFL
Trigger: GAGGAAATAGTAGAGAGACAAAGAGGGCCTGCTCCT...AGCAGAAGAGCTTGATGTTAAACAGTTCTCCTTAATTACGTGATTAAATACCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570371.5
CDS-3UTR CAA 90 bp GTATTTAATCACGTAATTAAGGAGAACTGTTTAACATCAAGCTCTTCTGCTGGTCCCTGCCCTTTAAAGTaGTGGTCATGTCTAGGAGGA +
Preference number: 5 (lower is better)
Translates to: VFNHVIKENCLTSSSSAGPCPLK*WSCLGG
Trigger: TCCTCCTAGACATGACCACAACTTTAAAGGGCAGGG...ACCAGCAGAAGAGCTTGATGTTAAACAGTTCTCCTTAATTACGTGATTAAATAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570371.5
CDS CCA 90 bp ATTCTCTTTAACAAATTCCTTCTTCACAATCAGAGACTGGAAACTTaGACCACAGTTCTGCACACACATGTCAATAAGCAACGTGATGAC +
Preference number: 5 (lower is better)
Translates to: ILFNKFLLHNQRLET*TTVLHTHVNKQRDD
Trigger: GTCATCACGTTGCTTATTGACATGTGTGTGCAGAACTGTGGTCCAAGTTTCCAGTCTCTGATTGTGAAGAAGGAATTTGTTAAAGAGAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572298.5
ENST00000572360.5
CDS-3UTR CAA 90 bp GTAATTAAGGAGAACTGTTTAACATCAAGCTCTTCTGCTGGTCTGAAAAGACCTATGTCTAATGGCAAGTaGTATCTGGGATTCAGTAGC +
Preference number: 5 (lower is better)
Translates to: VIKENCLTSSSSAGLKRPMSNGK*YLGFSS
Trigger: GCTACTGAATCCCAGATACAACTTGCCATTAGACAT...AGGTCTTTTCAGACCAGCAGAAGAGCTTGATGTTAAACAGTTCTCCTTAATTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570371.5
ENST00000575333.5
CDS-3UTR CAA 90 bp GTGGTATTTAATCACGTAATTAAGGAGAACTGTTTAACATCAAGCTCTTCTGCTGATTTGAGCAGTCTCTaGTCTTGCTGTTTCAGCCTC +
Preference number: 5 (lower is better)
Translates to: VVFNHVIKENCLTSSSSADLSSL*SCCFSL
Trigger: GAGGCTGAAACAGCAAGACAAGAGACTGCTCAAATC...AGCAGAAGAGCTTGATGTTAAACAGTTCTCCTTAATTACGTGATTAAATACCAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570371.5
ENST00000575333.5
CDS-3UTR CAA 90 bp GTAATTAAGGAGAACTGTTTAACATCAAGCTCTTCTGCTGGTCTGAAAAGACCTCAGATGTTGGAGGATTaGATGAGATTTGAGCAGTCT +
Preference number: 5 (lower is better)
Translates to: VIKENCLTSSSSAGLKRPQMLED*MRFEQS
Trigger: AGACTGCTCAAATCTCATCAAATCCTCCAACATCTG...AGGTCTTTTCAGACCAGCAGAAGAGCTTGATGTTAAACAGTTCTCCTTAATTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570371.5
ENST00000575333.5
CDS-3UTR CAA 90 bp AAGGAGAACTGTTTAACATCAAGCTCTTCTGCTGGTCTGAAAAGACCTGAGTGTTTGCTCCAAAATCCTTaGTTGGTTTCTAGTAAACCT +
Preference number: 5 (lower is better)
Translates to: KENCLTSSSSAGLKRPECLLQNP*LVSSKP
Trigger: AGGTTTACTAGAAACCAACAAAGGATTTTGGAGCAA...ACACTCAGGTCTTTTCAGACCAGCAGAAGAGCTTGATGTTAAACAGTTCTCCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000570371.5
ENST00000575333.5
CDS-3UTR CAA 90 bp AAAAACCCAATGATAATAGTGTGTAGGTTCACAGTAGACTTTAAGTATTGGCCACCTGAATTTCTCCGCTaGCATCAGAGATACTCCCTT +
Preference number: 5 (lower is better)
Translates to: KNPMIIVCRFTVDFKYWPPEFLR*HQRYSL
Trigger: AAGGGAGTATCTCTGATGCAAGCGGAGAAATTCAGG...TGGCCAATACTTAAAGTCTACTGTGAACCTACACACTATTATCATTGGGTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000575333.5
CDS-3UTR CAA 90 bp TTCTACATTTCACAACCACTCAGTTCATACCTTGTAATCCCTGAATTTCTCCGCTCCTTATTTTGTAATTaGCCAAACCCTTGCTGGGAA +
Preference number: 5 (lower is better)
Translates to: FYISQPLSSYLVIPEFLRSLFCN*PNPCWE
Trigger: TTCCCAGCAAGGGTTTGGCAAATTACAAAATAAGGA...GCGGAGAAATTCAGGGATTACAAGGTATGAACTGAGTGGTTGTGAAATGTAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575333.5
CDS-3UTR CAA 90 bp AATCACGTAATTAAGGAGAACTGTTTAACATCAAGCTCTTCTGCTGGTCTGAAAATGTCTAATGGCAAGTaGTATCTGGGATTCAGTAGC +
Preference number: 5 (lower is better)
Translates to: NHVIKENCLTSSSSAGLKMSNGK*YLGFSS
Trigger: GCTACTGAATCCCAGATACAACTTGCCATTAGACAT...TTTCAGACCAGCAGAAGAGCTTGATGTTAAACAGTTCTCCTTAATTACGTGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570371.5
ENST00000575333.5
CDS-3UTR CAA 90 bp AATCACGTAATTAAGGAGAACTGTTTAACATCAAGCTCTTCTGCTGGTCTGAAATCGAGGTATACTTCTTaGACTTCGCTTACATCCACA +
Preference number: 5 (lower is better)
Translates to: NHVIKENCLTSSSSAGLKSRYTS*TSLTST
Trigger: TGTGGATGTAAGCGAAGTCAAAGAAGTATACCTCGA...TTTCAGACCAGCAGAAGAGCTTGATGTTAAACAGTTCTCCTTAATTACGTGATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570371.5
ENST00000575333.5
CDS-3UTR CAA 90 bp CACGTAATTAAGGAGAACTGTTTAACATCAAGCTCTTCTGCTGGTCTGAAAAGACTCCAAAATCCTTTGTaGGTTTCTAGTAAACCTCTC +
Preference number: 5 (lower is better)
Translates to: HVIKENCLTSSSSAGLKRLQNPL*VSSKPL
Trigger: GAGAGGTTTACTAGAAACCAACAAAGGATTTTGGAG...TCTTTTCAGACCAGCAGAAGAGCTTGATGTTAAACAGTTCTCCTTAATTACGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000570371.5
ENST00000575333.5
CDS TCA 90 bp GGAGAACTGTTTAACATCAAGCTCTTCTGCTGGTCTGAAAAGACCTaGGTGTTTATTTACTTAAGCCTGAAAGTTGATTATTCATGGTGT +
Preference number: 5 (lower is better)
Translates to: GELFNIKLFCWSEKT*VFIYLSLKVDYSWC
Trigger: ACACCATGAATAATCAACTTTCAGGCTTAAGTAAATAAACACTCAGGTCTTTTCAGACCAGCAGAAGAGCTTGATGTTAAACAGTTCTCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000570371.5
ENST00000570623.1
ENST00000575333.5
CDS-3UTR CAA 90 bp AAGAGACAAATGAATCCAACTGGAAGTTTCATCGTCTTAAAGTTCCATAAGAAGATGTCTAATGGCAAGTaGTATCTGGGATTCAGTAGC +
Preference number: 5 (lower is better)
Translates to: KRQMNPTGSFIVLKFHKKMSNGK*YLGFSS
Trigger: GCTACTGAATCCCAGATACAACTTGCCATTAGACAT...CTTCTTATGGAACTTTAAGACGATGAAACTTCCAGTTGGATTCATTTGTCTCTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572405.5
CDS-3UTR CAA 90 bp TTTTCCTTCTACATTTCACAACCACTCAGTTCATACCTTGTAATCCCTGAATTTTCGAGGTATACTTCTTaGACTTCGCTTACATCCACA +
Preference number: 5 (lower is better)
Translates to: FSFYISQPLSSYLVIPEFSRYTS*TSLTST
Trigger: TGTGGATGTAAGCGAAGTCAAAGAAGTATACCTCGA...AAATTCAGGGATTACAAGGTATGAACTGAGTGGTTGTGAAATGTAGAAGGAAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000575333.5
CDS-3UTR CAA 90 bp GTATTTAATCACGTAATTAAGGAGAACTGTTTAACATCAAGCTCTTCTGCTGGTCAGATGTTGGAGGATTaGATGAGATTTGAGCAGTCT +
Preference number: 5 (lower is better)
Translates to: VFNHVIKENCLTSSSSAGQMLED*MRFEQS
Trigger: AGACTGCTCAAATCTCATCAAATCCTCCAACATCTG...ACCAGCAGAAGAGCTTGATGTTAAACAGTTCTCCTTAATTACGTGATTAAATAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570371.5
ENST00000575333.5
CDS CCA 90 bp TTAACTAAATTCTCTTTAACAAATTCCTTCTTCACAATCAGAGACTaGAAACTTGGACCACAGTTCTGCACACACATGTCAATAAGCCAT +
Preference number: 5 (lower is better)
Translates to: LTKFSLTNSFFTIRD*KLGPQFCTHMSISH
Trigger: ATGGCTTATTGACATGTGTGTGCAGAACTGTGGTCCAAGTTTCCAGTCTCTGATTGTGAAGAAGGAATTTGTTAAAGAGAATTTAGTTAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571319.5
CDS CCA 90 bp TTAACTAAATTCTCTTTAACAAATTCCTTCTTCACAATCAGAGACTaGAAACTTGGACCACAGTTCTGCACACACATGTCAATAAGCAAC +
Preference number: 5 (lower is better)
Translates to: LTKFSLTNSFFTIRD*KLGPQFCTHMSISN
Trigger: GTTGCTTATTGACATGTGTGTGCAGAACTGTGGTCCAAGTTTCCAGTCTCTGATTGTGAAGAAGGAATTTGTTAAAGAGAATTTAGTTAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572298.5
ENST00000572360.5
CDS CCA 90 bp TTAACTAAATTCTCTTTAACAAATTCCTTCTTCACAATCAGAGACTaGAAACTTGGACCACAGTTCTGCACACACATGTCAATAAGCTAT +
Preference number: 5 (lower is better)
Translates to: LTKFSLTNSFFTIRD*KLGPQFCTHMSISY
Trigger: ATAGCTTATTGACATGTGTGTGCAGAACTGTGGTCCAAGTTTCCAGTCTCTGATTGTGAAGAAGGAATTTGTTAAAGAGAATTTAGTTAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536554.5
ENST00000576932.5
CDS-3UTR CAA 90 bp GTGGTATTTAATCACGTAATTAAGGAGAACTGTTTAACATCAAGCTCTTCTGCTTTGCTCCAAAATCCTTaGTTGGTTTCTAGTAAACCT +
Preference number: 5 (lower is better)
Translates to: VVFNHVIKENCLTSSSSALLQNP*LVSSKP
Trigger: AGGTTTACTAGAAACCAACAAAGGATTTTGGAGCAA...AGCAGAAGAGCTTGATGTTAAACAGTTCTCCTTAATTACGTGATTAAATACCAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570371.5
ENST00000575333.5
CDS-3UTR CAA 90 bp GTGGTATTTAATCACGTAATTAAGGAGAACTGTTTAACATCAAGCTCTTCTGCTAACTGGCATTTCAACTaGGACTTCTCTGACTTTAAA +
Preference number: 5 (lower is better)
Translates to: VVFNHVIKENCLTSSSSANWHFN*DFSDFK
Trigger: TTTAAAGTCAGAGAAGTCCAAGTTGAAATGCCAGTT...AGCAGAAGAGCTTGATGTTAAACAGTTCTCCTTAATTACGTGATTAAATACCAC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575333.5
CDS GCA 72 bp GCAGCGCGCCCTGCGGGACCCGCGAGGAGGCTGCGCTaGCGGCTGCAGGTGGTACAGGCGGGTAGTGGCGGG +
Preference number: 6 (lower is better)
Translates to: AARPAGPARRLR*RLQVVQAGSGG
Trigger: CCCGCCACTACCCGCCTGTACCACCTGCAGCCGGCAGCGCAGCCTCCTCGCGGGTCCCGCAGGGCGCGCTGC
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570371.5
CDS GCA 72 bp GGGCTCTGGCAGAGGCGGTGCGTTCTGCGCTGCCGCTaGGGGGCGCGGGCACCGAGCGTGAGGAGCTGGGCG +
Preference number: 6 (lower is better)
Translates to: GLWQRRCVLRCR*GARAPSVRSWA
Trigger: CGCCCAGCTCCTCACGCTCGGTGCCCGCGCCCCGCAGCGGCAGCGCAGAACGCACCGCCTCTGCCAGAGCCC
78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000570371.5
CDS GCA 72 bp TTCGCCCGAGCGCTTCCCGGGCTCTGGCAGAGGCGGTaGGTTCTGCGCTGCCGCTGCGGGGCGCGGGCACCG +
Preference number: 6 (lower is better)
Translates to: FARALPGLWQRR*VLRCRCGARAP
Trigger: CGGTGCCCGCGCCCCGCAGCGGCAGCGCAGAACGCACCGCCTCTGCCAGAGCCCGGGAAGCGCTCGGGCGAA
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570371.5
CDS GCA 72 bp CTTCCCGGGCTCTGGCAGAGGCGGTGCGTTCTGCGCTaGCGCTGCGGGGCGCGGGCACCGAGCGTGAGGAGC +
Preference number: 6 (lower is better)
Translates to: LPGLWQRRCVLR*RCGARAPSVRS
Trigger: GCTCCTCACGCTCGGTGCCCGCGCCCCGCAGCGGCAGCGCAGAACGCACCGCCTCTGCCAGAGCCCGGGAAG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570371.5
CDS GCA 72 bp GCCCTGCGGGACCCGCGAGGAGGCTGCGCTGCCGGCTaGAGGTGGTACAGGCGGGTAGTGGCGGGTGTATGG +
Preference number: 6 (lower is better)
Translates to: ALRDPRGGCAAG*RWYRRVVAGVW
Trigger: CCATACACCCGCCACTACCCGCCTGTACCACCTGCAGCCGGCAGCGCAGCCTCCTCGCGGGTCCCGCAGGGC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570371.5
CDS CCA 72 bp TGCGAGAGTGGCGCGGCCGCCCGCTCGGATCCCAGGTaGGCTTTTCGCCCCGTGCAGGAGGAGCAGGCAGCC +
Preference number: 6 (lower is better)
Translates to: CESGAAARSDPR*AFRPVQEEQAA
Trigger: GGCTGCCTGCTCCTCCTGCACGGGGCGAAAAGCCCACCTGGGATCCGAGCGGGCGGCCGCGCCACTCTCGCA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570371.5
CDS CCA 72 bp GGCTGCAGGTGGTACAGGCGGGTAGTGGCGGGTGTATaGAGCCTGCGAGAGTGGCGCGGCCGCCCGCTCGGA +
Preference number: 6 (lower is better)
Translates to: GCRWYRRVVAGV*SLREWRGRPLG
Trigger: TCCGAGCGGGCGGCCGCGCCACTCTCGCAGGCTCCATACACCCGCCACTACCCGCCTGTACCACCTGCAGCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570371.5
CDS GCA 72 bp CCGCCCGCTCGGATCCCAGGTGGGCTTTTCGCCCCGTaGAGGAGGAGCAGGCAGCCCAGAATCTCCAGCCTG +
Preference number: 6 (lower is better)
Translates to: PPARIPGGLFAP*RRSRQPRISSL
Trigger: CAGGCTGGAGATTCTGGGCTGCCTGCTCCTCCTGCACGGGGCGAAAAGCCCACCTGGGATCCGAGCGGGCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570371.5
CDS CAA 90 bp ATCCTGCCGCTTGCTGGGCACCTTGTCATTCTTCTCTGCGCCTCTTaGGCTGCCCTTTGTCCTAGAGATCCGGGAGGGGAGGTGTGCGCC +
Preference number: 6 (lower is better)
Translates to: ILPLAGHLVILLCAS*AALCPRDPGGEVCA
Trigger: GGCGCACACCTCCCCTCCCGGATCTCTAGGACAAAGGGCAGCCAAAGAGGCGCAGAGAAGAATGACAAGGTGCCCAGCAAGCGGCAGGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570371.5
CDS CAA 90 bp ATCCTGCCGCTTGCTGGGCACCTTGTCATTCTTCTCTGCGCCTCTTaGGCTGCCCCTCGACCTGCCTTTGTCCTAGAGATCCGGGAGGGG +
Preference number: 6 (lower is better)
Translates to: ILPLAGHLVILLCAS*AAPRPAFVLEIREG
Trigger: CCCCTCCCGGATCTCTAGGACAAAGGCAGGTCGAGGGGCAGCCAAAGAGGCGCAGAGAAGAATGACAAGGTGCCCAGCAAGCGGCAGGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574744.1
CDS TCA 72 bp TGGTGTCTCCTCGTGGAGGCCCAAACACTCCATGCCTaGCTCCCGCGGTTCACCTGTTTGGTTCCACTCCCC +
Preference number: 6 (lower is better)
Translates to: WCLLVEAQTLHA*LPRFTCLVPLP
Trigger: GGGGAGTGGAACCAAACAGGTGAACCGCGGGAGTCAGGCATGGAGTGTTTGGGCCTCCACGAGGAGACACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573607.5
CDS GCA 72 bp ATCCTGCCGCTTGCTGGGCACCTTGTCATTCTTCTCTaGGCCTCTTTGGCTGCCCCTCGACCTGCCTTTGTC +
Preference number: 6 (lower is better)
Translates to: ILPLAGHLVILL*ASLAAPRPAFV
Trigger: GACAAAGGCAGGTCGAGGGGCAGCCAAAGAGGCGCAGAGAAGAATGACAAGGTGCCCAGCAAGCGGCAGGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574744.1
CDS CAA 72 bp TCCTCGAGGGACCACAGGGCGCCGCCTCGCAAGCTCTaGTTTTCTAACCCCACCTTCTGGGAGCCGTGTTTT +
Preference number: 6 (lower is better)
Translates to: SSRDHRAPPRKL*FSNPTFWEPCF
Trigger: AAAACACGGCTCCCAGAAGGTGGGGTTAGAAAACAAGAGCTTGCGAGGCGGCGCCCTGTGGTCCCTCGAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000570371.5
ENST00000574744.1
CDS CAA 90 bp GCAGGCAGCCCAGAATCTCCAGCCTGGGAATTAGAGACCCAGGCTTaGATCCTGCCGCTTGCTGGGCACCTTGTCATTCTTCTCTGCGCC +
Preference number: 6 (lower is better)
Translates to: AGSPESPAWELETQA*ILPLAGHLVILLCA
Trigger: GGCGCAGAGAAGAATGACAAGGTGCCCAGCAAGCGGCAGGATCAAAGCCTGGGTCTCTAATTCCCAGGCTGGAGATTCTGGGCTGCCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570371.5
ENST00000574744.1
CDS CAA 90 bp GAAGGATTGGCTTCGAATTTAGGGCTTCCCAGGAGCAGGCCCTCTTaGTCTCTCTACTATTTCCTCGAGGGACCACAGGGCGCCGCCTCG +
Preference number: 6 (lower is better)
Translates to: EGLASNLGLPRSRPS*SLYYFLEGPQGAAS
Trigger: CGAGGCGGCGCCCTGTGGTCCCTCGAGGAAATAGTAGAGAGACAAAGAGGGCCTGCTCCTGGGAAGCCCTAAATTCGAAGCCAATCCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570371.5
ENST00000574744.1
CDS GCA 72 bp GCTGCCCTTTGTCCTAGAGATCCGGGAGGGGAGGTGTaGGCCCTGCCCTTTAAAGTTGTGGTCATGTCTAGG +
Preference number: 6 (lower is better)
Translates to: AALCPRDPGGEV*ALPFKVVVMSR
Trigger: CCTAGACATGACCACAACTTTAAAGGGCAGGGCGCACACCTCCCCTCCCGGATCTCTAGGACAAAGGGCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570371.5
CDS CCA 72 bp TTGCTGGGCACCTTGTCATTCTTCTCTGCGCCTCTTTaGCTGCCCTTTGTCCTAGAGATCCGGGAGGGGAGG +
Preference number: 6 (lower is better)
Translates to: LLGTLSFFSAPL*LPFVLEIREGR
Trigger: CCTCCCCTCCCGGATCTCTAGGACAAAGGGCAGCCAAAGAGGCGCAGAGAAGAATGACAAGGTGCCCAGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570371.5
CDS CAA 72 bp CTTGCTGGGCACCTTGTCATTCTTCTCTGCGCCTCTTaGGCTGCCCTTTGTCCTAGAGATCCGGGAGGGGAG +
Preference number: 6 (lower is better)
Translates to: LAGHLVILLCAS*AALCPRDPGGE
Trigger: CTCCCCTCCCGGATCTCTAGGACAAAGGGCAGCCAAAGAGGCGCAGAGAAGAATGACAAGGTGCCCAGCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570371.5
CDS GCA 72 bp ACCTGCCTTTGTCCTAGAGATCCGGGAGGGGAGGTGTaGGCCCTGCCCTTTAAAGTTGTGGTCATGTCTAGG +
Preference number: 6 (lower is better)
Translates to: TCLCPRDPGGEV*ALPFKVVVMSR
Trigger: CCTAGACATGACCACAACTTTAAAGGGCAGGGCGCACACCTCCCCTCCCGGATCTCTAGGACAAAGGCAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574744.1
CDS GCA 72 bp TTTCTGGTGTCTCCTCGTGGAGGCCCAAACACTCCATaGCTGACTCCCGCGGTTCACCTGTTTGGTTCCACT +
Preference number: 6 (lower is better)
Translates to: FLVSPRGGPNTP*LTPAVHLFGST
Trigger: AGTGGAACCAAACAGGTGAACCGCGGGAGTCAGGCATGGAGTGTTTGGGCCTCCACGAGGAGACACCAGAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573607.5
CDS CCA 72 bp AAACACTCCATGCCTGACTCCCGCGGTTCACCTGTTTaGTTCCACTCCCCAGGCGGCATCGAAAGGAAGGTA +
Preference number: 6 (lower is better)
Translates to: KHSMPDSRGSPV*FHSPGGIERKV
Trigger: TACCTTCCTTTCGATGCCGCCTGGGGAGTGGAACCAAACAGGTGAACCGCGGGAGTCAGGCATGGAGTGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573607.5
CDS CAA 72 bp CTTGCTGGGCACCTTGTCATTCTTCTCTGCGCCTCTTaGGCTGCCCCTCGACCTGCCTTTGTCCTAGAGATC +
Preference number: 6 (lower is better)
Translates to: LAGHLVILLCAS*AAPRPAFVLEI
Trigger: GATCTCTAGGACAAAGGCAGGTCGAGGGGCAGCCAAAGAGGCGCAGAGAAGAATGACAAGGTGCCCAGCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574744.1
CDS GCA 72 bp ATTGGCGATGTTAACAATCTCCAGCCAGCAGGAGCCTaGCAGAGAGTGAGGTGTCCCCAGGCGATGTCAGAT +
Preference number: 6 (lower is better)
Translates to: IGDVNNLQPAGA*QRVRCPQAMSD
Trigger: ATCTGACATCGCCTGGGGACACCTCACTCTCTGGCAGGCTCCTGCTGGCTGGAGATTGTTAACATCGCCAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570371.5
CDS GCA 72 bp TTTGTCCTAGAGATCCGGGAGGGGAGGTGTGCGCCCTaGCCTTTAAAGTTGTGGTCATGTCTAGGAGGAAGG +
Preference number: 6 (lower is better)
Translates to: FVLEIREGRCAP*PLKLWSCLGGR
Trigger: CCTTCCTCCTAGACATGACCACAACTTTAAAGGGCAGGGCGCACACCTCCCCTCCCGGATCTCTAGGACAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570371.5
ENST00000574744.1
CDS CCA 72 bp GGAATTAGAGACCCAGGCTTTGATCCTGCCGCTTGCTaGGCACCTTGTCATTCTTCTCTGCGCCTCTTTGGC +
Preference number: 6 (lower is better)
Translates to: GIRDPGFDPAAC*APCHSSLRLFG
Trigger: GCCAAAGAGGCGCAGAGAAGAATGACAAGGTGCCCAGCAAGCGGCAGGATCAAAGCCTGGGTCTCTAATTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570371.5
ENST00000574744.1
CDS CAA 72 bp GCTTCGAATTTAGGGCTTCCCAGGAGCAGGCCCTCTTaGTCTCTCTACTATTTCCTCGAGGGACCACAGGGC +
Preference number: 6 (lower is better)
Translates to: ASNLGLPRSRPS*SLYYFLEGPQG
Trigger: GCCCTGTGGTCCCTCGAGGAAATAGTAGAGAGACAAAGAGGGCCTGCTCCTGGGAAGCCCTAAATTCGAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570371.5
ENST00000574744.1
CDS CAA 72 bp ATCCGGGAGGGGAGGTGTGCGCCCTGCCCTTTAAAGTaGTGGTCATGTCTAGGAGGAAGGATTGGCTTCGAA +
Preference number: 6 (lower is better)
Translates to: IREGRCAPCPLK*WSCLGGRIGFE
Trigger: TTCGAAGCCAATCCTTCCTCCTAGACATGACCACAACTTTAAAGGGCAGGGCGCACACCTCCCCTCCCGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570371.5
ENST00000574744.1
CDS CAA 90 bp GTCCTAGAGATCCGGGAGGGGAGGTGTGCGCCCTGCCCTTTAAAGTaGTGGTCATGTCTAGGAGGAAGGATTGGCTTCGAATTTAGGGCT +
Preference number: 6 (lower is better)
Translates to: VLEIREGRCAPCPLK*WSCLGGRIGFEFRA
Trigger: AGCCCTAAATTCGAAGCCAATCCTTCCTCCTAGACATGACCACAACTTTAAAGGGCAGGGCGCACACCTCCCCTCCCGGATCTCTAGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570371.5
ENST00000574744.1
CDS GCA 72 bp CTGGGAATTAGAGACCCAGGCTTTGATCCTGCCGCTTaGTGGGCACCTTGTCATTCTTCTCTGCGCCTCTTT +
Preference number: 6 (lower is better)
Translates to: LGIRDPGFDPAA*WAPCHSSLRLF
Trigger: AAAGAGGCGCAGAGAAGAATGACAAGGTGCCCAGCAAGCGGCAGGATCAAAGCCTGGGTCTCTAATTCCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570371.5
ENST00000574744.1
CDS CCA 72 bp CGGGAGGGGAGGTGTGCGCCCTGCCCTTTAAAGTTGTaGTCATGTCTAGGAGGAAGGATTGGCTTCGAATTT +
Preference number: 6 (lower is better)
Translates to: REGRCAPCPLKL*SCLGGRIGFEF
Trigger: AAATTCGAAGCCAATCCTTCCTCCTAGACATGACCACAACTTTAAAGGGCAGGGCGCACACCTCCCCTCCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570371.5
ENST00000574744.1
CDS TCA 72 bp TCACAGATGTGCATGAACTGGCCCCAATCTTCAGTCTaGACTCCAGCAAATGTAGCCTATGAGGTGGCCCAC +
Preference number: 6 (lower is better)
Translates to: SQMCMNWPQSSV*TPANVAYEVAH
Trigger: GTGGGCCACCTCATAGGCTACATTTGCTGGAGTTCAGACTGAAGATTGGGGCCAGTTCATGCACATCTGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572298.5
ENST00000572405.5
CDS CCA 72 bp ACTGGATTATCATATGCGTGGCTTGAGGTGAGGTTTTaGCTGGTCCTTTGGGCAAACGGGGGTATCTCTGTA +
Preference number: 6 (lower is better)
Translates to: TGLSYAWLEVRF*LVLWANGGISV
Trigger: TACAGAGATACCCCCGTTTGCCCAAAGGACCAGCCAAAACCTCACCTCAAGCCACGCATATGATAATCCAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000445275.6
CDS CCA 72 bp CTTACATTATCATATGCGTGGCTTGAGGTGAGGTTTTaGCTGGTCCTTTGGGCAAACGGGGGTATCTCTGTA +
Preference number: 6 (lower is better)
Translates to: LTLSYAWLEVRF*LVLWANGGISV
Trigger: TACAGAGATACCCCCGTTTGCCCAAAGGACCAGCCAAAACCTCACCTCAAGCCACGCATATGATAATGTAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000572905.1
CDS CCA 72 bp GATTCTAAAAACGGGAGAGGGGCTTTCCGTTTCTTCTaGCAAGGAGTATGCTTGGCTTTAGGCCTGCTTTGT +
Preference number: 6 (lower is better)
Translates to: DSKNGRGAFRFF*QGVCLALGLLC
Trigger: ACAAAGCAGGCCTAAAGCCAAGCATACTCCTTGCCAGAAGAAACGGAAAGCCCCTCTCCCGTTTTTAGAATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000570371.5
ENST00000574744.1
CDS CAA 90 bp AAAAACGGGAGAGGGGCTTTCCGTTTCTTCTGGCAAGGAGTATGCTaGGCTTTAGGCCTGCTTTGTAATGTAGGTTGGAATCTGAGAAGC +
Preference number: 6 (lower is better)
Translates to: KNGRGAFRFFWQGVC*ALGLLCNVGWNLRS
Trigger: GCTTCTCAGATTCCAACCTACATTACAAAGCAGGCCTAAAGCCAAGCATACTCCTTGCCAGAAGAAACGGAAAGCCCCTCTCCCGTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000570371.5
ENST00000574744.1
CDS CAA 72 bp AGAGGGGCTTTCCGTTTCTTCTGGCAAGGAGTATGCTaGGCTTTAGGCCTGCTTTGTAATGTAGGTTGGAAT +
Preference number: 6 (lower is better)
Translates to: RGAFRFFWQGVC*ALGLLCNVGWN
Trigger: ATTCCAACCTACATTACAAAGCAGGCCTAAAGCCAAGCATACTCCTTGCCAGAAGAAACGGAAAGCCCCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570371.5
ENST00000574744.1
CDS TCA 72 bp TCACAGATGTGCATGAACTGGCCCCAATCTTCAGTCTaGACTCCAGCAAATGTAGCCTTTTCTGCCAAGAAA +
Preference number: 6 (lower is better)
Translates to: SQMCMNWPQSSV*TPANVAFSAKK
Trigger: TTTCTTGGCAGAAAAGGCTACATTTGCTGGAGTTCAGACTGAAGATTGGGGCCAGTTCATGCACATCTGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570965.5
CDS TCA 72 bp TCACAGATGTGCATGAACTGGCCCCAATCTTCAGTCTaGACTCCAGCAAATGTAGCCTTTTCTGTTTGGTTC +
Preference number: 6 (lower is better)
Translates to: SQMCMNWPQSSV*TPANVAFSVWF
Trigger: GAACCAAACAGAAAAGGCTACATTTGCTGGAGTTCAGACTGAAGATTGGGGCCAGTTCATGCACATCTGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000575909.1
CDS TCA 72 bp AAGAGTTTTGTTACTTACATTATCATATGCGTGGCTTaGGGTGAGGTTTTGGCTGGTCCTTTGGGCAAACGG +
Preference number: 6 (lower is better)
Translates to: KSFVTYIIICVA*GEVLAGPLGKR
Trigger: CCGTTTGCCCAAAGGACCAGCCAAAACCTCACCTCAAGCCACGCATATGATAATGTAAGTAACAAAACTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572905.1
CDS CCA 72 bp AACAAATTCCTTCTTCACAATCAGAGACTGGAAACTTaGACCACAGTTCTGCACACACATGTCAATAAGCCA +
Preference number: 6 (lower is better)
Translates to: NKFLLHNQRLET*TTVLHTHVNKP
Trigger: TGGCTTATTGACATGTGTGTGCAGAACTGTGGTCCAAGTTTCCAGTCTCTGATTGTGAAGAAGGAATTTGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571319.5
CDS TCA 72 bp AAAGACCTGAGTGTTTATTTACTTAAGCCTGAAAGTTaGTTATTCATGGTGTTGAGTTCTCCCAGAGTGGCC +
Preference number: 6 (lower is better)
Translates to: KDLSVYLLKPES*LFMVLSSPRVA
Trigger: GGCCACTCTGGGAGAACTCAACACCATGAATAATCAACTTTCAGGCTTAAGTAAATAAACACTCAGGTCTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000570371.5
ENST00000570623.1
ENST00000575333.5
CDS CCA 72 bp AACAAATTCCTTCTTCACAATCAGAGACTGGAAACTTaGACCACAGTTCTGCACACACATGTCAATAAGCTA +
Preference number: 6 (lower is better)
Translates to: NKFLLHNQRLET*TTVLHTHVNKL
Trigger: TAGCTTATTGACATGTGTGTGCAGAACTGTGGTCCAAGTTTCCAGTCTCTGATTGTGAAGAAGGAATTTGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536554.5
ENST00000576932.5
CDS CCA 72 bp AACAAATTCCTTCTTCACAATCAGAGACTGGAAACTTaGACCACAGTTCTGCACACACATGTCAATAAGCAA +
Preference number: 6 (lower is better)
Translates to: NKFLLHNQRLET*TTVLHTHVNKQ
Trigger: TTGCTTATTGACATGTGTGTGCAGAACTGTGGTCCAAGTTTCCAGTCTCTGATTGTGAAGAAGGAATTTGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572298.5
ENST00000572360.5
CDS CCA 72 bp TTCTCTTTAACAAATTCCTTCTTCACAATCAGAGACTaGAAACTTGGACCACAGTTTGACAAGGTAAGTTGG +
Preference number: 6 (lower is better)
Translates to: FSLTNSFFTIRD*KLGPQFDKVSW
Trigger: CCAACTTACCTTGTCAAACTGTGGTCCAAGTTTCCAGTCTCTGATTGTGAAGAAGGAATTTGTTAAAGAGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572158.5