RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TOLLIP (Homo sapiens)

Ensembl gene IDs: ENSG00000078902

Ensembl transcript IDs: ENST00000263646.11, ENST00000317204.11, ENST00000525159.5, ENST00000527085.1, ENST00000527638.1, ENST00000527746.5, ENST00000527886.5, ENST00000527938.5, ENST00000528719.1, ENST00000530506.5, ENST00000530541.1, ENST00000530821.1, ENST00000532551.1

Found 826 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GACGGCAGCCTCCGGCGGGCGAAGGACCCGGCTTCAGATGCCCGCTaGCTGGCAATCAGGCAGAGCCTGGCCAACCGTGCCAGGCCCCCT +
Preference number: 1 (lower is better)
Translates to: DGSLRRAKDPASDAR*LAIRQSLANRARPP
Trigger: AGGGGGCCTGGCACGGTTGGCCAGGCTCTGCCTGATTGCCAGCCAGCGGGCATCTGAAGCCGGGTCCTTCGCCCGCCGGAGGCTGCCGTC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
3UTR CCA 90 bp GCAGCCTCCGGCGGGCGAAGGACCCGGCTTCAGATGCCCGCTGGCTaGCAATCAGGCAGAGCCTGGCCAACCGTGCCAGGCCCCCTTCCT +
Preference number: 1 (lower is better)
Translates to: AASGGRRTRLQMPAG*QSGRAWPTVPGPLP
Trigger: AGGAAGGGGGCCTGGCACGGTTGGCCAGGCTCTGCCTGATTGCCAGCCAGCGGGCATCTGAAGCCGGGTCCTTCGCCCGCCGGAGGCTGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
3UTR CCA 90 bp CGGCAAAGGGTTGCTCTCCCTCCAGCGAGGCTGGCCCCCACTGTGTaGGTCCCTCGGGCCCCCACACGGGCTGCTCAAGGGCTGGCAGCA +
Preference number: 1 (lower is better)
Translates to: RQRVALPPARLAPTV*VPRAPTRAAQGLAA
Trigger: TGCTGCCAGCCCTTGAGCAGCCCGTGTGGGGGCCCGAGGGACCCACACAGTGGGGGCCAGCCTCGCTGGAGGGAGAGCAACCCTTTGCCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
3UTR GCA 90 bp AGAGACGGACGGCAGCCTCCGGCGGGCGAAGGACCCGGCTTCAGATaGCCGCTGGCTGGCAATCAGGCAGAGCCTGGCCAACCGTGCCAG +
Preference number: 1 (lower is better)
Translates to: RDGRQPPAGEGPGFR*PLAGNQAEPGQPCQ
Trigger: CTGGCACGGTTGGCCAGGCTCTGCCTGATTGCCAGCCAGCGGGCATCTGAAGCCGGGTCCTTCGCCCGCCGGAGGCTGCCGTCCGTCTCT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
3UTR CCA 90 bp AACATGTCCTGGATGGCTTTCAGGTCCTCCTCGCTACAGCGGGGCTaGGCGTTCACGGCGGCCGGGGGCAGGGCCACGGGCACCATGCCG +
Preference number: 1 (lower is better)
Translates to: NMSWMAFRSSSLQRG*AFTAAGGRATGTMP
Trigger: CGGCATGGTGCCCGTGGCCCTGCCCCCGGCCGCCGTGAACGCCCAGCCCCGCTGTAGCGAGGAGGACCTGAAAGCCATCCAGGACATGTT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000530506.5
3UTR CCA 90 bp AGGCCTGTTGAGAAGAGAAGCTCCCTGGGAGGACACCCACGGAGCTaGCACGAGCGCAGCAGGAGAGACGGACGGCAGCCTCCGGCGGGC +
Preference number: 1 (lower is better)
Translates to: RPVEKRSSLGGHPRS*HERSRRDGRQPPAG
Trigger: GCCCGCCGGAGGCTGCCGTCCGTCTCTCCTGCTGCGCTCGTGCCAGCTCCGTGGGTGTCCTCCCAGGGAGCTTCTCTTCTCAACAGGCCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
3UTR CCA 90 bp GGCCACGCTCGCCAGGCTTTCCTCGCCCACGCTGAACCCACGTCCTaGGCACAGCAGCTCCCAAGCTGTCAGCAGTCGGCTGGCAGTGCC +
Preference number: 1 (lower is better)
Translates to: GHARQAFLAHAEPTS*AQQLPSCQQSAGSA
Trigger: GGCACTGCCAGCCGACTGCTGACAGCTTGGGAGCTGCTGTGCCCAGGACGTGGGTTCAGCGTGGGCGAGGAAAGCCTGGCGAGCGTGGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
3UTR CCA 90 bp GGCAGTCTCACTGCACCCCAGCAACGCGAAGGCAGAAACCGGTGCTaGTGGCCACACCTGGGCGCCTGGACACCGAAGCCCCCAGCACAG +
Preference number: 1 (lower is better)
Translates to: GSLTAPQQREGRNRC*WPHLGAWTPKPPAQ
Trigger: CTGTGCTGGGGGCTTCGGTGTCCAGGCGCCCAGGTGTGGCCACCAGCACCGGTTTCTGCCTTCGCGTTGCTGGGGTGCAGTGAGACTGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
3UTR GCA 90 bp TGTGGCAGTCTCACTGCACCCCAGCAACGCGAAGGCAGAAACCGGTaGTGGTGGCCACACCTGGGCGCCTGGACACCGAAGCCCCCAGCA +
Preference number: 1 (lower is better)
Translates to: CGSLTAPQQREGRNR*WWPHLGAWTPKPPA
Trigger: TGCTGGGGGCTTCGGTGTCCAGGCGCCCAGGTGTGGCCACCAGCACCGGTTTCTGCCTTCGCGTTGCTGGGGTGCAGTGAGACTGCCACA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
3UTR CCA 90 bp AGGACCCGGCTTCAGATGCCCGCTGGCTGGCAATCAGGCAGAGCCTaGCCAACCGTGCCAGGCCCCCTTCCTCACTCCAGGTGTGGGTTC +
Preference number: 1 (lower is better)
Translates to: RTRLQMPAGWQSGRA*PTVPGPLPHSRCGF
Trigger: GAACCCACACCTGGAGTGAGGAAGGGGGCCTGGCACGGTTGGCCAGGCTCTGCCTGATTGCCAGCCAGCGGGCATCTGAAGCCGGGTCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
3UTR CCA 90 bp CCTCTCACCCCAGCCTCGCAAGGCCTGTTGAGAAGAGAAGCTCCCTaGGAGGACACCCACGGAGCTGGCACGAGCGCAGCAGGAGAGACG +
Preference number: 1 (lower is better)
Translates to: PLTPASQGLLRREAP*EDTHGAGTSAAGET
Trigger: CGTCTCTCCTGCTGCGCTCGTGCCAGCTCCGTGGGTGTCCTCCCAGGGAGCTTCTCTTCTCAACAGGCCTTGCGAGGCTGGGGTGAGAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
3UTR CCA 90 bp GGCGACCTGTCTTCTATCTCCGGAGCCCCGCCTGAGGCTCCAAGATaGCACAGTCAGGCTGTCCTTAGTGACCGCTGCCACGGAGCTGGC +
Preference number: 1 (lower is better)
Translates to: GDLSSISGAPPEAPR*HSQAVLSDRCHGAG
Trigger: GCCAGCTCCGTGGCAGCGGTCACTAAGGACAGCCTGACTGTGCCATCTTGGAGCCTCAGGCGGGGCTCCGGAGATAGAAGACAGGTCGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
3UTR GCA 90 bp CAACCGTGCCAGGCCCCCTTCCTCACTCCAGGTGTGGGTTCATTCTaGCTTCAGGCCGGAGTCTGTCACAAGGCTGGCTGGACAGTGGCC +
Preference number: 1 (lower is better)
Translates to: QPCQAPFLTPGVGSF*LQAGVCHKAGWTVA
Trigger: GGCCACTGTCCAGCCAGCCTTGTGACAGACTCCGGCCTGAAGGCAGAATGAACCCACACCTGGAGTGAGGAAGGGGGCCTGGCACGGTTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
3UTR GCA 90 bp GGAGACACCCACAGAGCCACATGTGCACGCGTGTGGCAGTCTCACTaGACCCCAGCAACGCGAAGGCAGAAACCGGTGCTGGTGGCCACA +
Preference number: 1 (lower is better)
Translates to: GDTHRATCARVWQSH*TPATRRQKPVLVAT
Trigger: TGTGGCCACCAGCACCGGTTTCTGCCTTCGCGTTGCTGGGGTGCAGTGAGACTGCCACACGCGTGCACATGTGGCTCTGTGGGTGTCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
3UTR GCA 90 bp AGCAGGGGCCACGTCCTCTCTAGGAGACACCCACAGAGCCACATGTaGACGCGTGTGGCAGTCTCACTGCACCCCAGCAACGCGAAGGCA +
Preference number: 1 (lower is better)
Translates to: SRGHVLSRRHPQSHM*TRVAVSLHPSNAKA
Trigger: TGCCTTCGCGTTGCTGGGGTGCAGTGAGACTGCCACACGCGTGCACATGTGGCTCTGTGGGTGTCTCCTAGAGAGGACGTGGCCCCTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
3UTR CCA 90 bp TCCACGGGAGGGGGCGACACGGGTGCTCTTTCACGGGAATCTTGTTaGGACAGCATTCCTTGGGGAGCGCCGGGTCGGCGTGTCCAAAGA +
Preference number: 1 (lower is better)
Translates to: STGGGDTGALSRESC*DSIPWGAPGRRVQR
Trigger: TCTTTGGACACGCCGACCCGGCGCTCCCCAAGGAATGCTGTCCCAACAAGATTCCCGTGAAAGAGCACCCGTGTCGCCCCCTCCCGTGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
ENST00000530506.5
3UTR CCA 90 bp CAGAGCCTGGCCAACCGTGCCAGGCCCCCTTCCTCACTCCAGGTGTaGGTTCATTCTGCCTTCAGGCCGGAGTCTGTCACAAGGCTGGCT +
Preference number: 1 (lower is better)
Translates to: QSLANRARPPSSLQV*VHSAFRPESVTRLA
Trigger: AGCCAGCCTTGTGACAGACTCCGGCCTGAAGGCAGAATGAACCCACACCTGGAGTGAGGAAGGGGGCCTGGCACGGTTGGCCAGGCTCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
3UTR CCA 90 bp CGGAGCGGATCACCTCCTGGTCCATGTTGGGGAACATGTCCTGGATaGCTTTCAGGTCCTCCTCGCTACAGCGGGGCTGGGCGTTCACGG +
Preference number: 1 (lower is better)
Translates to: RSGSPPGPCWGTCPG*LSGPPRYSGAGRSR
Trigger: CCGTGAACGCCCAGCCCCGCTGTAGCGAGGAGGACCTGAAAGCCATCCAGGACATGTTCCCCAACATGGACCAGGAGGTGATCCGCTCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530506.5
3UTR CCA 90 bp CCCATCTGCAGCAGGGAGTTGATGGCGGCATCCTTGTTCCCTCGCTaGGCTTCCAGCACGGAGCGGATCACCTCCTGGTCCATGTTGGGG +
Preference number: 1 (lower is better)
Translates to: PICSRELMAASLFPR*ASSTERITSWSMLG
Trigger: CCCCAACATGGACCAGGAGGTGATCCGCTCCGTGCTGGAAGCCCAGCGAGGGAACAAGGATGCCGCCATCAACTCCCTGCTGCAGATGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527938.5
ENST00000530506.5
3UTR TCA 90 bp GTAGGCCAAGATGCTACACGCAGCGCCCAGGCAGTCAGAGGTAAGTaGGCGCCTCCCGCCTCAGAAAGCTTTTACAGGGCCACGCTCGCC +
Preference number: 1 (lower is better)
Translates to: VGQDATRSAQAVRGK*APPASESFYRATLA
Trigger: GGCGAGCGTGGCCCTGTAAAAGCTTTCTGAGGCGGGAGGCGCTCACTTACCTCTGACTGCCTGGGCGCTGCGTGTAGCATCTTGGCCTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
3UTR GCA 90 bp TTCAGATGCCCGCTGGCTGGCAATCAGGCAGAGCCTGGCCAACCGTaGCAGGCCCCCTTCCTCACTCCAGGTGTGGGTTCATTCTGCCTT +
Preference number: 1 (lower is better)
Translates to: FRCPLAGNQAEPGQP*QAPFLTPGVGSFCL
Trigger: AAGGCAGAATGAACCCACACCTGGAGTGAGGAAGGGGGCCTGGCACGGTTGGCCAGGCTCTGCCTGATTGCCAGCCAGCGGGCATCTGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
3UTR GCA 90 bp GGCAAAACGGCATCGAGGCAGAGGCTCTATGGCTCCTCCCCCATCTaGAGCAGGGAGTTGATGGCGGCATCCTTGTTCCCTCGCTGGGCT +
Preference number: 1 (lower is better)
Translates to: GKTASRQRLYGSSPI*SRELMAASLFPRWA
Trigger: AGCCCAGCGAGGGAACAAGGATGCCGCCATCAACTCCCTGCTGCAGATGGGGGAGGAGCCATAGAGCCTCTGCCTCGATGCCGTTTTGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000527938.5
ENST00000530506.5
3UTR CCA 90 bp GACACGGGTGCTCTTTCACGGGAATCTTGTTGGGACAGCATTCCTTaGGGAGCGCCGGGTCGGCGTGTCCAAAGAGCGGGGGCAAAACGG +
Preference number: 1 (lower is better)
Translates to: DTGALSRESCWDSIP*GAPGRRVQRAGAKR
Trigger: CCGTTTTGCCCCCGCTCTTTGGACACGCCGACCCGGCGCTCCCCAAGGAATGCTGTCCCAACAAGATTCCCGTGAAAGAGCACCCGTGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
ENST00000530506.5
3UTR CCA 90 bp AGCACGGAGCGGATCACCTCCTGGTCCATGTTGGGGAACATGTCCTaGATGGCTTTCAGGTCCTCCTCGCTACAGCGGGGCTGGGCGTTC +
Preference number: 1 (lower is better)
Translates to: STERITSWSMLGNMS*MAFRSSSLQRGWAF
Trigger: GAACGCCCAGCCCCGCTGTAGCGAGGAGGACCTGAAAGCCATCCAGGACATGTTCCCCAACATGGACCAGGAGGTGATCCGCTCCGTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530506.5
3UTR GCA 90 bp GTCCTGGGCACAGCAGCTCCCAAGCTGTCAGCAGTCGGCTGGCAGTaGCACCACACCCTCTCGGAATCATGCACAGTGCTGCCTCTATCA +
Preference number: 1 (lower is better)
Translates to: VLGTAAPKLSAVGWQ*HHTLSESCTVLPLS
Trigger: TGATAGAGGCAGCACTGTGCATGATTCCGAGAGGGTGTGGTGGCACTGCCAGCCGACTGCTGACAGCTTGGGAGCTGCTGTGCCCAGGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
3UTR GCA 90 bp AAGAAAACTAAGAGATGGCGGCAAGCGTGGTCATCGGCAAAGGGTTaGTCTCCCTCCAGCGAGGCTGGCCCCCACTGTGTGGGTCCCTCG +
Preference number: 1 (lower is better)
Translates to: KKTKRWRQAWSSAKG*SPSSEAGPHCVGPS
Trigger: CGAGGGACCCACACAGTGGGGGCCAGCCTCGCTGGAGGGAGAGCAACCCTTTGCCGATGACCACGCTTGCCGCCATCTCTTAGTTTTCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
3UTR GCA 90 bp CCTGAGGCTCCAAGATGGCACAGTCAGGCTGTCCTTAGTGACCGCTaGCACGGAGCTGGCGATCGGCCTGCATCTTCAAACCCAGGAGCA +
Preference number: 1 (lower is better)
Translates to: PEAPRWHSQAVLSDR*HGAGDRPASSNPGA
Trigger: TGCTCCTGGGTTTGAAGATGCAGGCCGATCGCCAGCTCCGTGGCAGCGGTCACTAAGGACAGCCTGACTGTGCCATCTTGGAGCCTCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
3UTR CCA 90 bp ACGTCCTCTCTAGGAGACACCCACAGAGCCACATGTGCACGCGTGTaGCAGTCTCACTGCACCCCAGCAACGCGAAGGCAGAAACCGGTG +
Preference number: 1 (lower is better)
Translates to: TSSLGDTHRATCARV*QSHCTPATRRQKPV
Trigger: CACCGGTTTCTGCCTTCGCGTTGCTGGGGTGCAGTGAGACTGCCACACGCGTGCACATGTGGCTCTGTGGGTGTCTCCTAGAGAGGACGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
3UTR CCA 90 bp CTCGCTGGGCTTCCAGCACGGAGCGGATCACCTCCTGGTCCATGTTaGGGAACATGTCCTGGATGGCTTTCAGGTCCTCCTCGCTACAGC +
Preference number: 1 (lower is better)
Translates to: LAGLPARSGSPPGPC*GTCPGWLSGPPRYS
Trigger: GCTGTAGCGAGGAGGACCTGAAAGCCATCCAGGACATGTTCCCCAACATGGACCAGGAGGTGATCCGCTCCGTGCTGGAAGCCCAGCGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527938.5
ENST00000530506.5
3UTR TCA 90 bp CAGGGGCCTAAACCCAGCTCCCAAACCCACTGCAGCCTCCCCTTGTaGGCTGGCAGACAAGCCTGTCCTTCTGAGTGTGACGACCTCATC +
Preference number: 1 (lower is better)
Translates to: QGPKPSSQTHCSLPL*AGRQACPSECDDLI
Trigger: GATGAGGTCGTCACACTCAGAAGGACAGGCTTGTCTGCCAGCTCACAAGGGGAGGCTGCAGTGGGTTTGGGAGCTGGGTTTAGGCCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
3UTR CCA 90 bp TCCTTGTTCCCTCGCTGGGCTTCCAGCACGGAGCGGATCACCTCCTaGTCCATGTTGGGGAACATGTCCTGGATGGCTTTCAGGTCCTCC +
Preference number: 1 (lower is better)
Translates to: SLFPRWASSTERITS*SMLGNMSWMAFRSS
Trigger: GGAGGACCTGAAAGCCATCCAGGACATGTTCCCCAACATGGACCAGGAGGTGATCCGCTCCGTGCTGGAAGCCCAGCGAGGGAACAAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527938.5
ENST00000530506.5
3UTR CCA 90 bp CAAGCAGGGTACAGCCCCAACGCGTCAGTGTCAGCTTCATCTAGATaGCCGTACTGTGCCAGGGACGCCCCTGCTTATTGGAAACGCATG +
Preference number: 1 (lower is better)
Translates to: QAGYSPNASVSASSR*PYCARDAPAYWKRM
Trigger: CATGCGTTTCCAATAAGCAGGGGCGTCCCTGGCACAGTACGGCCATCTAGATGAAGCTGACACTGACGCGTTGGGGCTGTACCCTGCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530506.5
3UTR TCA 90 bp ATGTCTTTCTTCTTCAAAGGATCAAAGGCCTTTAGGACCCACAGCTaGAGAAGGCGCCTGCTGCCAGCATGTCCCTCCCCCACGGCCACC +
Preference number: 1 (lower is better)
Translates to: MSFFFKGSKAFRTHS*RRRLLPACPSPTAT
Trigger: GGTGGCCGTGGGGGAGGGACATGCTGGCAGCAGGCGCCTTCTTCAGCTGTGGGTCCTAAAGGCCTTTGATCCTTTGAAGAAGAAAGACAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
3UTR GCA 90 bp AATCGGAAGGCGCTCCACCACCTCCAACACCCTGGCAGAAGCAGCTaGTCTCTACAGCAAGAGCATTTTCCAGAACGGCATGAGAAGGAG +
Preference number: 1 (lower is better)
Translates to: NRKALHHLQHPGRSS*SLQQEHFPERHEKE
Trigger: CTCCTTCTCATGCCGTTCTGGAAAATGCTCTTGCTGTAGAGAGCAGCTGCTTCTGCCAGGGTGTTGGAGGTGGTGGAGCGCCTTCCGATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
3UTR CCA 90 bp CCAGGCCATCTGAGACAGGGAATCCCAGGGGCCCCTCCGTCTGAGTaGTCGGCGTCTGCTGAACAAATACCATGTCTTTCTTCTTCAAAG +
Preference number: 1 (lower is better)
Translates to: PGHLRQGIPGAPPSE*SASAEQIPCLSSSK
Trigger: CTTTGAAGAAGAAAGACATGGTATTTGTTCAGCAGACGCCGACCACTCAGACGGAGGGGCCCCTGGGATTCCCTGTCTCAGATGGCCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
3UTR CCA 90 bp AATAAAGCGCTTGTGAAAAAGAAAACTAAGAGATGGCGGCAAGCGTaGTCATCGGCAAAGGGTTGCTCTCCCTCCAGCGAGGCTGGCCCC +
Preference number: 1 (lower is better)
Translates to: NKALVKKKTKRWRQA*SSAKGCSPSSEAGP
Trigger: GGGGCCAGCCTCGCTGGAGGGAGAGCAACCCTTTGCCGATGACCACGCTTGCCGCCATCTCTTAGTTTTCTTTTTCACAAGCGCTTTATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
3UTR CCA 90 bp CACAGAAGACCCACTTGTGGGCATTCTCTTTCTGTCCGTTATCAGTaGGTTTACATCCGAAGGCCGGCGGCAAGACACTTGAACCACAAA +
Preference number: 1 (lower is better)
Translates to: HRRPTCGHSLSVRYQ*VYIRRPAARHLNHK
Trigger: TTTGTGGTTCAAGTGTCTTGCCGCCGGCCTTCGGATGTAAACCCACTGATAACGGACAGAAAGAGAATGCCCACAAGTGGGTCTTCTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
3UTR CCA 90 bp TCAACAGCTCTATTCCAATTACATCACATCACAAAATGCCATGAATaGAATCGGAAGGCGCTCCACCACCTCCAACACCCTGGCAGAAGC +
Preference number: 1 (lower is better)
Translates to: STALFQLHHITKCHE*NRKALHHLQHPGRS
Trigger: GCTTCTGCCAGGGTGTTGGAGGTGGTGGAGCGCCTTCCGATTCCATTCATGGCATTTTGTGATGTGATGTAATTGGAATAGAGCTGTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
3UTR GCA 90 bp TGCCTTAAATCAACAGCTCTATTCCAATTACATCACATCACAAAATaGCATGAATGGAATCGGAAGGCGCTCCACCACCTCCAACACCCT +
Preference number: 1 (lower is better)
Translates to: CLKSTALFQLHHITK*HEWNRKALHHLQHP
Trigger: AGGGTGTTGGAGGTGGTGGAGCGCCTTCCGATTCCATTCATGGCATTTTGTGATGTGATGTAATTGGAATAGAGCTGTTGATTTAAGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
3UTR CCA 90 bp GGCAAGACACTTGAACCACAAACACCAGACATGCAGGTGTCTCAATaGCATGCAGATTATTTAAAGTGCATCACTTGTGAGAAGCTTCTC +
Preference number: 1 (lower is better)
Translates to: GKTLEPQTPDMQVSQ*HADYLKCITCEKLL
Trigger: GAGAAGCTTCTCACAAGTGATGCACTTTAAATAATCTGCATGCCATTGAGACACCTGCATGTCTGGTGTTTGTGGTTCAAGTGTCTTGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
3UTR-3UTR CCA 90 bp CCACGGAGCTGGCACGAGCGCAGCAGGAGAGACGGACGGCAGCCTCCGGCGGGCCCTCCCAGCACGAGATaGGAGGGGAGCCCCCGCCCC +
Preference number: 2 (lower is better)
Translates to: PRSWHERSRRDGRQPPAGPPSTR*EGSPRP
Trigger: GGGGCGGGGGCTCCCCTCCCATCTCGTGCTGGGAGG...GCCCGCCGGAGGCTGCCGTCCGTCTCTCCTGCTGCGCTCGTGCCAGCTCCGTGG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
3UTR-3UTR CCA 90 bp TGCACCCAAGAACAGGTGTGGACGGGGCGGCACAGAAGTCCACGGGAGGGGGCGGCCCCCGCCCCGTCCTaGACCGCCAGGAACCGAAAA +
Preference number: 2 (lower is better)
Translates to: CTQEQVWTGRHRSPREGAAPAPS*TARNRK
Trigger: TTTTCGGTTCCTGGCGGTCCAGGACGGGGCGGGGGC...CGCCCCCTCCCGTGGACTTCTGTGCCGCCCCGTCCACACCTGTTCTTGGGTGCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
ENST00000530506.5
3UTR-3UTR CCA 90 bp GGAGCGCCGGGTCGGCGTGTCCAAAGAGCGGGGGCAAAACGGCATCGAGGCAGAGCCCCCGCCCCGTCCTaGACCGCCAGGAACCGAAAA +
Preference number: 2 (lower is better)
Translates to: GAPGRRVQRAGAKRHRGRAPAPS*TARNRK
Trigger: TTTTCGGTTCCTGGCGGTCCAGGACGGGGCGGGGGC...TCTGCCTCGATGCCGTTTTGCCCCCGCTCTTTGGACACGCCGACCCGGCGCTCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
ENST00000530506.5
3UTR-3UTR CCA 90 bp GGGAGGACACCCACGGAGCTGGCACGAGCGCAGCAGGAGAGACGGACGGCAGCCCAGATGCCCGCTGGCTaGCAATCAGGCAGAGCCTGG +
Preference number: 2 (lower is better)
Translates to: GRTPTELARAQQERRTAAQMPAG*QSGRAW
Trigger: CCAGGCTCTGCCTGATTGCCAGCCAGCGGGCATCTG...GGCTGCCGTCCGTCTCTCCTGCTGCGCTCGTGCCAGCTCCGTGGGTGTCCTCCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
3UTR-3UTR CCA 90 bp CTCCCCCATCTGCAGCAGGGAGTTGATGGCGGCATCCTTGTTCCCTCGCTGGGCTCGCTACAGCGGGGCTaGGCGTTCACGGCGGCCGGG +
Preference number: 2 (lower is better)
Translates to: LPHLQQGVDGGILVPSLGSLQRG*AFTAAG
Trigger: CCCGGCCGCCGTGAACGCCCAGCCCCGCTGTAGCGA...GCCCAGCGAGGGAACAAGGATGCCGCCATCAACTCCCTGCTGCAGATGGGGGAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000530506.5
3UTR-3UTR TCA 90 bp CAGCAGGAGAGACGGACGGCAGCCTCCGGCGGGCGAAGGACCCGGCTTCAGATGGACAGGAGAGCGCGCTaGGACCTCCCAGCACGAGAT +
Preference number: 2 (lower is better)
Translates to: QQERRTAASGGRRTRLQMDRRAR*DLPARD
Trigger: ATCTCGTGCTGGGAGGTCTCAGCGCGCTCTCCTGTC...CATCTGAAGCCGGGTCCTTCGCCCGCCGGAGGCTGCCGTCCGTCTCTCCTGCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
3UTR-3UTR CCA 90 bp AGCCCTGGGCAGGGGCCAGGCTCACAGCAAAGCGCGTTAGGGCAAGGGCGTGAGTGGGACAGCATTCCTTaGGGAGCGCCGGGTCGGCGT +
Preference number: 2 (lower is better)
Translates to: SPGQGPGSQQSALGQGREWDSIP*GAPGRR
Trigger: ACGCCGACCCGGCGCTCCCCAAGGAATGCTGTCCCA...CTCACGCCCTTGCCCTAACGCGCTTTGCTGTGAGCCTGGCCCCTGCCCAGGGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
3UTR-3UTR CCA 90 bp TGCACCCAAGAACAGGTGTGGACGGGGCGGCACAGAAGTCCACGGGAGGGGGCGTGGGACAGCATTCCTTaGGGAGCGCCGGGTCGGCGT +
Preference number: 2 (lower is better)
Translates to: CTQEQVWTGRHRSPREGAWDSIP*GAPGRR
Trigger: ACGCCGACCCGGCGCTCCCCAAGGAATGCTGTCCCA...CGCCCCCTCCCGTGGACTTCTGTGCCGCCCCGTCCACACCTGTTCTTGGGTGCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
ENST00000530506.5
3UTR-3UTR CCA 90 bp CGCCCCGTCCTGGACCGCCAGGAACCGAAAACCCACATGCACCCAAGAACAGGTCCTCCCAGCACGAGATaGGAGGGGAGCCCCCGCCCC +
Preference number: 2 (lower is better)
Translates to: RPVLDRQEPKTHMHPRTGPPSTR*EGSPRP
Trigger: GGGGCGGGGGCTCCCCTCCCATCTCGTGCTGGGAGG...ACCTGTTCTTGGGTGCATGTGGGTTTTCGGTTCCTGGCGGTCCAGGACGGGGCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
3UTR-3UTR CCA 90 bp TTCCCTCGCTGGGCTTCCAGCACGGAGCGGATCACCTCCTGGTCCATGTTGGGGGGCTGGGGGCTCCGGTaGGGCGTCAGGTGGACGAGT +
Preference number: 2 (lower is better)
Translates to: FPRWASSTERITSWSMLGGWGLR*GVRWTS
Trigger: ACTCGTCCACCTGACGCCCCACCGGAGCCCCCAGCC...CCCCAACATGGACCAGGAGGTGATCCGCTCCGTGCTGGAAGCCCAGCGAGGGAA
68% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000530506.5
3UTR-3UTR GCA 90 bp GTTGATGGCGGCATCCTTGTTCCCTCGCTGGGCTTCCAGCACGGAGCGGATCACGGGCCACGGGCACCATaGCGGGGCTACAGACAGCGG +
Preference number: 2 (lower is better)
Translates to: VDGGILVPSLGFQHGADHGPRAP*RGYRQR
Trigger: CCGCTGTCTGTAGCCCCGGCATGGTGCCCGTGGCCC...GTGATCCGCTCCGTGCTGGAAGCCCAGCGAGGGAACAAGGATGCCGCCATCAAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530506.5
3UTR-3UTR CCA 90 bp GGAGCGCCGGGTCGGCGTGTCCAAAGAGCGGGGGCAAAACGGCATCGAGGCAGACCCCTAGGAGCAAGATaGGGACCCCTCCAGGCCAAG +
Preference number: 2 (lower is better)
Translates to: GAPGRRVQRAGAKRHRGRPLGAR*GPLQAK
Trigger: CTTGGCCTGGAGGGGTCCCCATCTTGCTCCTAGGGG...TCTGCCTCGATGCCGTTTTGCCCCCGCTCTTTGGACACGCCGACCCGGCGCTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000530506.5
3UTR-3UTR GCA 90 bp GGGAGGACACCCACGGAGCTGGCACGAGCGCAGCAGGAGAGACGGACGGCAGCCCCATCCACAGGAAGCTaGTCAGCTCACCAGACCCAA +
Preference number: 2 (lower is better)
Translates to: GRTPTELARAQQERRTAAPSTGS*SAHQTQ
Trigger: TTGGGTCTGGTGAGCTGAGCAGCTTCCTGTGGATGG...GGCTGCCGTCCGTCTCTCCTGCTGCGCTCGTGCCAGCTCCGTGGGTGTCCTCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
3UTR-3UTR CCA 90 bp GGACGGCAGCCTCCGGCGGGCGAAGGACCCGGCTTCAGATGCCCGCTGGCTGGCTCACGGGAATCTTGTTaGGACAGCATTCCTTGGGGA +
Preference number: 2 (lower is better)
Translates to: GRQPPAGEGPGFRCPLAGSRESC*DSIPWG
Trigger: TCCCCAAGGAATGCTGTCCCAACAAGATTCCCGTGA...GCCAGCCAGCGGGCATCTGAAGCCGGGTCCTTCGCCCGCCGGAGGCTGCCGTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
3UTR-3UTR CCA 90 bp CCCCGCCTGAGGCTCCAAGATGGCACAGTCAGGCTGTCCTTAGTGACCGCTGCCACCAGACCCAAGCCCTaGGCAGGGGCCAGGCTCACA +
Preference number: 2 (lower is better)
Translates to: PRLRLQDGTVRLSLVTAATRPKP*AGARLT
Trigger: TGTGAGCCTGGCCCCTGCCCAGGGCTTGGGTCTGGT...GGCAGCGGTCACTAAGGACAGCCTGACTGTGCCATCTTGGAGCCTCAGGCGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
3UTR-3UTR CCA 90 bp TGGCACAGTCAGGCTGTCCTTAGTGACCGCTGCCACGGAGCTGGCGATCGGCCTAGGCTGGCTGGACAGTaGCCAGGTGAGCCAGGCCAG +
Preference number: 2 (lower is better)
Translates to: WHSQAVLSDRCHGAGDRPRLAGQ*PGEPGQ
Trigger: CTGGCCTGGCTCACCTGGCCACTGTCCAGCCAGCCT...AGGCCGATCGCCAGCTCCGTGGCAGCGGTCACTAAGGACAGCCTGACTGTGCCA
66% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
3UTR-3UTR CCA 90 bp GTCAGGCTGTCCTTAGTGACCGCTGCCACGGAGCTGGCGATCGGCCTGCATCTTCCACACCTGGGCGCCTaGACACCGAAGCCCCCAGCA +
Preference number: 2 (lower is better)
Translates to: VRLSLVTAATELAIGLHLPHLGA*TPKPPA
Trigger: TGCTGGGGGCTTCGGTGTCCAGGCGCCCAGGTGTGG...AAGATGCAGGCCGATCGCCAGCTCCGTGGCAGCGGTCACTAAGGACAGCCTGAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
3UTR CAA 90 bp GTCCACGGGAGGGGGCGACACGGGTGCTCTTTCACGGGAATCTTGTaGGGACAGCATTCCTTGGGGAGCGCCGGGTCGGCGTGTCCAAAG +
Preference number: 2 (lower is better)
Translates to: VHGRGRHGCSFTGIL*GQHSLGSAGSACPK
Trigger: CTTTGGACACGCCGACCCGGCGCTCCCCAAGGAATGCTGTCCCAACAAGATTCCCGTGAAAGAGCACCCGTGTCGCCCCCTCCCGTGGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
ENST00000530506.5
3UTR CAA 90 bp GAAGTCCACGGGAGGGGGCGACACGGGTGCTCTTTCACGGGAATCTaGTTGGGACAGCATTCCTTGGGGAGCGCCGGGTCGGCGTGTCCA +
Preference number: 2 (lower is better)
Translates to: EVHGRGRHGCSFTGI*LGQHSLGSAGSACP
Trigger: TGGACACGCCGACCCGGCGCTCCCCAAGGAATGCTGTCCCAACAAGATTCCCGTGAAAGAGCACCCGTGTCGCCCCCTCCCGTGGACTTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
ENST00000530506.5
3UTR-3UTR TCA 90 bp AGGGCTGGCAGCAGGGGCCACGTCCTCTCTAGGAGACACCCACAGAGCCACATGGACAGGAGAGCGCGCTaGGACCTCCCAGCACGAGAT +
Preference number: 2 (lower is better)
Translates to: RAGSRGHVLSRRHPQSHMDRRAR*DLPARD
Trigger: ATCTCGTGCTGGGAGGTCTCAGCGCGCTCTCCTGTC...CATGTGGCTCTGTGGGTGTCTCCTAGAGAGGACGTGGCCCCTGCTGCCAGCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
3UTR-3UTR GCA 90 bp CAGCAGGAGAGACGGACGGCAGCCTCCGGCGGGCGAAGGACCCGGCTTCAGATGGGTGTGGGTTCATTCTaGCTTCAGGCCGGAGTCTGT +
Preference number: 2 (lower is better)
Translates to: QQERRTAASGGRRTRLQMGVGSF*LQAGVC
Trigger: ACAGACTCCGGCCTGAAGGCAGAATGAACCCACACC...CATCTGAAGCCGGGTCCTTCGCCCGCCGGAGGCTGCCGTCCGTCTCTCCTGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
3UTR-3UTR GCA 90 bp GCAGGGGCCACGTCCTCTCTAGGAGACACCCACAGAGCCACATGTGCACGCGTGGCTGAAGAAGGCGCCTaGTGCCAGCATGTCCCTCCC +
Preference number: 2 (lower is better)
Translates to: AGATSSLGDTHRATCARVAEEGA*CQHVPP
Trigger: GGGAGGGACATGCTGGCAGCAGGCGCCTTCTTCAGC...CACGCGTGCACATGTGGCTCTGTGGGTGTCTCCTAGAGAGGACGTGGCCCCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
3UTR-3UTR GCA 90 bp TGGCACAGTCAGGCTGTCCTTAGTGACCGCTGCCACGGAGCTGGCGATCGGCCTGAAGGCAGAAACCGGTaGTGGTGGCCACACCTGGGC +
Preference number: 2 (lower is better)
Translates to: WHSQAVLSDRCHGAGDRPEGRNR*WWPHLG
Trigger: GCCCAGGTGTGGCCACCAGCACCGGTTTCTGCCTTC...AGGCCGATCGCCAGCTCCGTGGCAGCGGTCACTAAGGACAGCCTGACTGTGCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
3UTR-3UTR GCA 90 bp CCGCTGCCACGGAGCTGGCGATCGGCCTGCATCTTCAAACCCAGGAGCAGGAGCGTGTGGCAGTCTCACTaGACCCCAGCAACGCGAAGG +
Preference number: 2 (lower is better)
Translates to: PLPRSWRSACIFKPRSRSVWQSH*TPATRR
Trigger: CCTTCGCGTTGCTGGGGTGCAGTGAGACTGCCACAC...GCTCCTGCTCCTGGGTTTGAAGATGCAGGCCGATCGCCAGCTCCGTGGCAGCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
3UTR-3UTR CCA 90 bp GACCGCCAGGAACCGAAAACCCACATGCACCCAAGAACAGGTGTGGACGGGGCGTGGGACAGCATTCCTTaGGGAGCGCCGGGTCGGCGT +
Preference number: 2 (lower is better)
Translates to: DRQEPKTHMHPRTGVDGAWDSIP*GAPGRR
Trigger: ACGCCGACCCGGCGCTCCCCAAGGAATGCTGTCCCA...CGCCCCGTCCACACCTGTTCTTGGGTGCATGTGGGTTTTCGGTTCCTGGCGGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
ENST00000530506.5
3UTR-3UTR CCA 90 bp GTTGGGACAGCATTCCTTGGGGAGCGCCGGGTCGGCGTGTCCAAAGAGCGGGGGCCACCTCCAACACCCTaGCAGAAGCAGCTGCTCTCT +
Preference number: 2 (lower is better)
Translates to: VGTAFLGERRVGVSKERGPPPTP*QKQLLS
Trigger: AGAGAGCAGCTGCTTCTGCCAGGGTGTTGGAGGTGG...CCCCCGCTCTTTGGACACGCCGACCCGGCGCTCCCCAAGGAATGCTGTCCCAAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
3UTR-3UTR CCA 90 bp TTAGTGACCGCTGCCACGGAGCTGGCGATCGGCCTGCATCTTCAAACCCAGGAGGCTGGTGGCCACACCTaGGCGCCTGGACACCGAAGC +
Preference number: 2 (lower is better)
Translates to: LVTAATELAIGLHLQTQEAGGHT*APGHRS
Trigger: GCTTCGGTGTCCAGGCGCCCAGGTGTGGCCACCAGC...CTCCTGGGTTTGAAGATGCAGGCCGATCGCCAGCTCCGTGGCAGCGGTCACTAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
3UTR-3UTR CCA 90 bp CGTCAGTGTCAGCTTCATCTAGATGGCCGTACTGTGCCAGGGACGCCCCTGCTTACGCATGCCTGGGCATaGGGGCTGGGGGCTCCGGTG +
Preference number: 2 (lower is better)
Translates to: RQCQLHLDGRTVPGTPLLTHAWA*GLGAPV
Trigger: CACCGGAGCCCCCAGCCCCCATGCCCAGGCATGCGT...AAGCAGGGGCGTCCCTGGCACAGTACGGCCATCTAGATGAAGCTGACACTGACG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000530506.5
3UTR-3UTR CCA 90 bp CGGCATCCTTGTTCCCTCGCTGGGCTTCCAGCACGGAGCGGATCACCTCCTGGTTTGGAAACGCATGCCTaGGCATGGGGGCTGGGGGCT +
Preference number: 2 (lower is better)
Translates to: RHPCSLAGLPARSGSPPGLETHA*AWGLGA
Trigger: AGCCCCCAGCCCCCATGCCCAGGCATGCGTTTCCAA...ACCAGGAGGTGATCCGCTCCGTGCTGGAAGCCCAGCGAGGGAACAAGGATGCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000530506.5
3UTR CAA 90 bp TATGGCTCCTCCCCCATCTGCAGCAGGGAGTTGATGGCGGCATCCTaGTTCCCTCGCTGGGCTTCCAGCACGGAGCGGATCACCTCCTGG +
Preference number: 2 (lower is better)
Translates to: YGSSPICSRELMAAS*FPRWASSTERITSW
Trigger: CCAGGAGGTGATCCGCTCCGTGCTGGAAGCCCAGCGAGGGAACAAGGATGCCGCCATCAACTCCCTGCTGCAGATGGGGGAGGAGCCATA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000527938.5
ENST00000530506.5
3UTR CAA 90 bp TCGAGGCAGAGGCTCTATGGCTCCTCCCCCATCTGCAGCAGGGAGTaGATGGCGGCATCCTTGTTCCCTCGCTGGGCTTCCAGCACGGAG +
Preference number: 2 (lower is better)
Translates to: SRQRLYGSSPICSRE*MAASLFPRWASSTE
Trigger: CTCCGTGCTGGAAGCCCAGCGAGGGAACAAGGATGCCGCCATCAACTCCCTGCTGCAGATGGGGGAGGAGCCATAGAGCCTCTGCCTCGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000527938.5
ENST00000530506.5
3UTR-3UTR TCA 90 bp CCCCGCCTGAGGCTCCAAGATGGCACAGTCAGGCTGTCCTTAGTGACCGCTGCCCCTCGCAAGGCCTGTTaGGAAGAGAAGCTCCCTGGG +
Preference number: 2 (lower is better)
Translates to: PRLRLQDGTVRLSLVTAAPRKAC*EEKLPG
Trigger: CCCAGGGAGCTTCTCTTCTCAACAGGCCTTGCGAGG...GGCAGCGGTCACTAAGGACAGCCTGACTGTGCCATCTTGGAGCCTCAGGCGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
3UTR-3UTR GCA 90 bp GGGAGGACACCCACGGAGCTGGCACGAGCGCAGCAGGAGAGACGGACGGCAGCCAACCGAAAACCCACATaGACCCAAGAACAGGTGTGG +
Preference number: 2 (lower is better)
Translates to: GRTPTELARAQQERRTAANRKPT*TQEQVW
Trigger: CCACACCTGTTCTTGGGTGCATGTGGGTTTTCGGTT...GGCTGCCGTCCGTCTCTCCTGCTGCGCTCGTGCCAGCTCCGTGGGTGTCCTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
3UTR-3UTR GCA 90 bp GGGAGCGCCGGGTCGGCGTGTCCAAAGAGCGGGGGCAAAACGGCATCGAGGCAGCCTGGCAGAAGCAGCTaGTCTCTACAGCAAGAGCAT +
Preference number: 2 (lower is better)
Translates to: GSAGSACPKSGGKTASRQPGRSS*SLQQEH
Trigger: ATGCTCTTGCTGTAGAGAGCAGCTGCTTCTGCCAGG...CTGCCTCGATGCCGTTTTGCCCCCGCTCTTTGGACACGCCGACCCGGCGCTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
3UTR-3UTR GCA 90 bp GCCTCGCAAGGCCTGTTGAGAAGAGAAGCTCCCTGGGAGGACACCCACGGAGCTGGACCCGGCTTCAGATaGCCGCTGGCTGGCAATCAG +
Preference number: 2 (lower is better)
Translates to: ASQGLLRREAPWEDTHGAGPGFR*PLAGNQ
Trigger: CTGATTGCCAGCCAGCGGGCATCTGAAGCCGGGTCC...AGCTCCGTGGGTGTCCTCCCAGGGAGCTTCTCTTCTCAACAGGCCTTGCGAGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
3UTR-3UTR GCA 90 bp CCGCTGCCACGGAGCTGGCGATCGGCCTGCATCTTCAAACCCAGGAGCAGGAGCCCACAGAGCCACATGTaGACGCGTGTGGCAGTCTCA +
Preference number: 2 (lower is better)
Translates to: PLPRSWRSACIFKPRSRSPQSHM*TRVAVS
Trigger: TGAGACTGCCACACGCGTGCACATGTGGCTCTGTGG...GCTCCTGCTCCTGGGTTTGAAGATGCAGGCCGATCGCCAGCTCCGTGGCAGCGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
3UTR-3UTR CCA 90 bp AAACCCACATGCACCCAAGAACAGGTGTGGACGGGGCGGCACAGAAGTCCACGGTGGGACAGCATTCCTTaGGGAGCGCCGGGTCGGCGT +
Preference number: 2 (lower is better)
Translates to: KPTCTQEQVWTGRHRSPRWDSIP*GAPGRR
Trigger: ACGCCGACCCGGCGCTCCCCAAGGAATGCTGTCCCA...CCGTGGACTTCTGTGCCGCCCCGTCCACACCTGTTCTTGGGTGCATGTGGGTTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
ENST00000530506.5
3UTR-3UTR CCA 90 bp AAAACCCACATGCACCCAAGAACAGGTGTGGACGGGGCGGCACAGAAGTCCACGGCCCCCGCCCCGTCCTaGACCGCCAGGAACCGAAAA +
Preference number: 2 (lower is better)
Translates to: KTHMHPRTGVDGAAQKSTAPAPS*TARNRK
Trigger: TTTTCGGTTCCTGGCGGTCCAGGACGGGGCGGGGGC...CGTGGACTTCTGTGCCGCCCCGTCCACACCTGTTCTTGGGTGCATGTGGGTTTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
ENST00000530506.5
3UTR-3UTR CCA 90 bp GTCCGTTATCAGTGGGTTTACATCCGAAGGCCGGCGGCAAGACACTTGAACCACCCTCCCAGCACGAGATaGGAGGGGAGCCCCCGCCCC +
Preference number: 2 (lower is better)
Translates to: VRYQWVYIRRPAARHLNHPPSTR*EGSPRP
Trigger: GGGGCGGGGGCTCCCCTCCCATCTCGTGCTGGGAGG...GTGGTTCAAGTGTCTTGCCGCCGGCCTTCGGATGTAAACCCACTGATAACGGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
3UTR-3UTR CCA 90 bp GCCTCGCAAGGCCTGTTGAGAAGAGAAGCTCCCTGGGAGGACACCCACGGAGCTCAGATGCCCGCTGGCTaGCAATCAGGCAGAGCCTGG +
Preference number: 2 (lower is better)
Translates to: ASQGLLRREAPWEDTHGAQMPAG*QSGRAW
Trigger: CCAGGCTCTGCCTGATTGCCAGCCAGCGGGCATCTG...AGCTCCGTGGGTGTCCTCCCAGGGAGCTTCTCTTCTCAACAGGCCTTGCGAGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
3UTR-3UTR CCA 90 bp CCCCGCCTGAGGCTCCAAGATGGCACAGTCAGGCTGTCCTTAGTGACCGCTGCCGCTTCAGATGCCCGCTaGCTGGCAATCAGGCAGAGC +
Preference number: 2 (lower is better)
Translates to: PRLRLQDGTVRLSLVTAAASDAR*LAIRQS
Trigger: GCTCTGCCTGATTGCCAGCCAGCGGGCATCTGAAGC...GGCAGCGGTCACTAAGGACAGCCTGACTGTGCCATCTTGGAGCCTCAGGCGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
3UTR-3UTR GCA 90 bp CGGGTGCTCTTTCACGGGAATCTTGTTGGGACAGCATTCCTTGGGGAGCGCCGGGGCTCCTCCCCCATCTaGAGCAGGGAGTTGATGGCG +
Preference number: 2 (lower is better)
Translates to: RVLFHGNLVGTAFLGERRGSSPI*SRELMA
Trigger: CGCCATCAACTCCCTGCTGCAGATGGGGGAGGAGCC...CCGGCGCTCCCCAAGGAATGCTGTCCCAACAAGATTCCCGTGAAAGAGCACCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000530506.5
3UTR-3UTR CCA 90 bp CCTCCTGGTCCATGTTGGGGAACATGTCCTGGATGGCTTTCAGGTCCTCCTCGCTGGGACAGCATTCCTTaGGGAGCGCCGGGTCGGCGT +
Preference number: 2 (lower is better)
Translates to: PPGPCWGTCPGWLSGPPRWDSIP*GAPGRR
Trigger: ACGCCGACCCGGCGCTCCCCAAGGAATGCTGTCCCA...GCGAGGAGGACCTGAAAGCCATCCAGGACATGTTCCCCAACATGGACCAGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530506.5
3UTR-3UTR CCA 90 bp CAGCAGGAGAGACGGACGGCAGCCTCCGGCGGGCGAAGGACCCGGCTTCAGATGTCACGGGAATCTTGTTaGGACAGCATTCCTTGGGGA +
Preference number: 2 (lower is better)
Translates to: QQERRTAASGGRRTRLQMSRESC*DSIPWG
Trigger: TCCCCAAGGAATGCTGTCCCAACAAGATTCCCGTGA...CATCTGAAGCCGGGTCCTTCGCCCGCCGGAGGCTGCCGTCCGTCTCTCCTGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
3UTR-3UTR CCA 90 bp GCAGGGGCCACGTCCTCTCTAGGAGACACCCACAGAGCCACATGTGCACGCGTGACCCAAGAACAGGTGTaGACGGGGCGGCACAGAAGT +
Preference number: 2 (lower is better)
Translates to: AGATSSLGDTHRATCARVTQEQV*TGRHRS
Trigger: ACTTCTGTGCCGCCCCGTCCACACCTGTTCTTGGGT...CACGCGTGCACATGTGGCTCTGTGGGTGTCTCCTAGAGAGGACGTGGCCCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
3UTR-3UTR CCA 90 bp GCCCGCTGGCTGGCAATCAGGCAGAGCCTGGCCAACCGTGCCAGGCCCCCTTCCACAAAATGCCATGAATaGAATCGGAAGGCGCTCCAC +
Preference number: 2 (lower is better)
Translates to: ARWLAIRQSLANRARPPSTKCHE*NRKALH
Trigger: GTGGAGCGCCTTCCGATTCCATTCATGGCATTTTGT...GGAAGGGGGCCTGGCACGGTTGGCCAGGCTCTGCCTGATTGCCAGCCAGCGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
3UTR-3UTR CCA 90 bp TCCGGCGACCTGTCTTCTATCTCCGGAGCCCCGCCTGAGGCTCCAAGATGGCACCCTCCCCTTGTGAGCTaGCAGACAAGCCTGTCCTTC +
Preference number: 2 (lower is better)
Translates to: SGDLSSISGAPPEAPRWHPPLVS*QTSLSF
Trigger: GAAGGACAGGCTTGTCTGCCAGCTCACAAGGGGAGG...GTGCCATCTTGGAGCCTCAGGCGGGGCTCCGGAGATAGAAGACAGGTCGCCGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
3UTR-3UTR CCA 90 bp TGCACCCAAGAACAGGTGTGGACGGGGCGGCACAGAAGTCCACGGGAGGGGGCGTCAGCTTCATCTAGATaGCCGTACTGTGCCAGGGAC +
Preference number: 2 (lower is better)
Translates to: CTQEQVWTGRHRSPREGASASSR*PYCARD
Trigger: GTCCCTGGCACAGTACGGCCATCTAGATGAAGCTGA...CGCCCCCTCCCGTGGACTTCTGTGCCGCCCCGTCCACACCTGTTCTTGGGTGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000530506.5
3UTR CAA 90 bp CCTCGCTGGGCTTCCAGCACGGAGCGGATCACCTCCTGGTCCATGTaGGGGAACATGTCCTGGATGGCTTTCAGGTCCTCCTCGCTACAG +
Preference number: 2 (lower is better)
Translates to: PRWASSTERITSWSM*GNMSWMAFRSSSLQ
Trigger: CTGTAGCGAGGAGGACCTGAAAGCCATCCAGGACATGTTCCCCAACATGGACCAGGAGGTGATCCGCTCCGTGCTGGAAGCCCAGCGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527938.5
ENST00000530506.5
3UTR-3UTR GCA 90 bp GCGCAGCAGGAGAGACGGACGGCAGCCTCCGGCGGGCGAAGGACCCGGCTTCAGGTGAGGGATTGTGTGTaGCTTAAATCAACAGCTCTA +
Preference number: 2 (lower is better)
Translates to: AQQERRTAASGGRRTRLQVRDCV*LKSTAL
Trigger: TAGAGCTGTTGATTTAAGGCACACACAATCCCTCAC...CTGAAGCCGGGTCCTTCGCCCGCCGGAGGCTGCCGTCCGTCTCTCCTGCTGCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
3UTR-3UTR GCA 90 bp CCACATGCACCCAAGAACAGGTGTGGACGGGGCGGCACAGAAGTCCACGGGAGGCCATCCACAGGAAGCTaGTCAGCTCACCAGACCCAA +
Preference number: 2 (lower is better)
Translates to: PHAPKNRCGRGGTEVHGRPSTGS*SAHQTQ
Trigger: TTGGGTCTGGTGAGCTGAGCAGCTTCCTGTGGATGG...CCTCCCGTGGACTTCTGTGCCGCCCCGTCCACACCTGTTCTTGGGTGCATGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
3UTR-3UTR GCA 90 bp AGGGCTGGCAGCAGGGGCCACGTCCTCTCTAGGAGACACCCACAGAGCCACATGGGTGTGGGTTCATTCTaGCTTCAGGCCGGAGTCTGT +
Preference number: 2 (lower is better)
Translates to: RAGSRGHVLSRRHPQSHMGVGSF*LQAGVC
Trigger: ACAGACTCCGGCCTGAAGGCAGAATGAACCCACACC...CATGTGGCTCTGTGGGTGTCTCCTAGAGAGGACGTGGCCCCTGCTGCCAGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
3UTR-3UTR GCA 90 bp CCCCATCTGCAGCAGGGAGTTGATGGCGGCATCCTTGTTCCCTCGCTGGGCTTCCTTATTGGAAACGCATaGCTGGGCATGGGGGCTGGG +
Preference number: 2 (lower is better)
Translates to: PHLQQGVDGGILVPSLGFLIGNA*LGMGAG
Trigger: CCCAGCCCCCATGCCCAGGCATGCGTTTCCAATAAG...GAAGCCCAGCGAGGGAACAAGGATGCCGCCATCAACTCCCTGCTGCAGATGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000530506.5
3UTR-3UTR CCA 90 bp CGCCCCGTCCTGGACCGCCAGGAACCGAAAACCCACATGCACCCAAGAACAGGTACCCAAGAACAGGTGTaGACGGGGCGGCACAGAAGT +
Preference number: 2 (lower is better)
Translates to: RPVLDRQEPKTHMHPRTGTQEQV*TGRHRS
Trigger: ACTTCTGTGCCGCCCCGTCCACACCTGTTCTTGGGT...ACCTGTTCTTGGGTGCATGTGGGTTTTCGGTTCCTGGCGGTCCAGGACGGGGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
ENST00000530506.5
3UTR-3UTR CCA 90 bp GGGAGCGCCGGGTCGGCGTGTCCAAAGAGCGGGGGCAAAACGGCATCGAGGCAGACAAAATGCCATGAATaGAATCGGAAGGCGCTCCAC +
Preference number: 2 (lower is better)
Translates to: GSAGSACPKSGGKTASRQTKCHE*NRKALH
Trigger: GTGGAGCGCCTTCCGATTCCATTCATGGCATTTTGT...CTGCCTCGATGCCGTTTTGCCCCCGCTCTTTGGACACGCCGACCCGGCGCTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
3UTR-3UTR CCA 90 bp GCCTCGCAAGGCCTGTTGAGAAGAGAAGCTCCCTGGGAGGACACCCACGGAGCTAGTCTGTCACAAGGCTaGCTGGACAGTGGCCAGGTG +
Preference number: 2 (lower is better)
Translates to: ASQGLLRREAPWEDTHGASLSQG*LDSGQV
Trigger: CACCTGGCCACTGTCCAGCCAGCCTTGTGACAGACT...AGCTCCGTGGGTGTCCTCCCAGGGAGCTTCTCTTCTCAACAGGCCTTGCGAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
3UTR-3UTR CCA 90 bp TGGTCCATGTTGGGGAACATGTCCTGGATGGCTTTCAGGTCCTCCTCGCTACAGAGGGAGGCAAGGCCATaGAGGGCCAGTGACCCCGGC +
Preference number: 2 (lower is better)
Translates to: WSMLGNMSWMAFRSSSLQREARP*RASDPG
Trigger: GCCGGGGTCACTGGCCCTCCATGGCCTTGCCTCCCT...CTGTAGCGAGGAGGACCTGAAAGCCATCCAGGACATGTTCCCCAACATGGACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530506.5
3UTR-3UTR TCA 90 bp AGCCCTGGGCAGGGGCCAGGCTCACAGCAAAGCGCGTTAGGGCAAGGGCGTGAGCATCACAAAATGCCATaGATGGAATCGGAAGGCGCT +
Preference number: 2 (lower is better)
Translates to: SPGQGPGSQQSALGQGREHHKMP*MESEGA
Trigger: AGCGCCTTCCGATTCCATTCATGGCATTTTGTGATG...CTCACGCCCTTGCCCTAACGCGCTTTGCTGTGAGCCTGGCCCCTGCCCAGGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
3UTR-3UTR TCA 90 bp CCCCGCCTGAGGCTCCAAGATGGCACAGTCAGGCTGTCCTTAGTGACCGCTGCCGTTAGGGCAAGGGCGTaGGTTTTCGTCTGGGAAGTT +
Preference number: 2 (lower is better)
Translates to: PRLRLQDGTVRLSLVTAAVRARA*VFVWEV
Trigger: AACTTCCCAGACGAAAACTCACGCCCTTGCCCTAAC...GGCAGCGGTCACTAAGGACAGCCTGACTGTGCCATCTTGGAGCCTCAGGCGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
3UTR-3UTR GCA 90 bp CGGGTGCTCTTTCACGGGAATCTTGTTGGGACAGCATTCCTTGGGGAGCGCCGGAGGGGGCGACACGGGTaGTCTTTCACGGGAATCTTG +
Preference number: 2 (lower is better)
Translates to: RVLFHGNLVGTAFLGERRRGRHG*SFTGIL
Trigger: CAAGATTCCCGTGAAAGAGCACCCGTGTCGCCCCCT...CCGGCGCTCCCCAAGGAATGCTGTCCCAACAAGATTCCCGTGAAAGAGCACCCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
ENST00000530506.5
3UTR-3UTR GCA 90 bp CCCCGCCTGAGGCTCCAAGATGGCACAGTCAGGCTGTCCTTAGTGACCGCTGCCCCTGGCAGAAGCAGCTaGTCTCTACAGCAAGAGCAT +
Preference number: 2 (lower is better)
Translates to: PRLRLQDGTVRLSLVTAAPGRSS*SLQQEH
Trigger: ATGCTCTTGCTGTAGAGAGCAGCTGCTTCTGCCAGG...GGCAGCGGTCACTAAGGACAGCCTGACTGTGCCATCTTGGAGCCTCAGGCGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
3UTR-3UTR GCA 90 bp GTCAGGCTGTCCTTAGTGACCGCTGCCACGGAGCTGGCGATCGGCCTGCATCTTCCATCCACAGGAAGCTaGTCAGCTCACCAGACCCAA +
Preference number: 2 (lower is better)
Translates to: VRLSLVTAATELAIGLHLPSTGS*SAHQTQ
Trigger: TTGGGTCTGGTGAGCTGAGCAGCTTCCTGTGGATGG...AAGATGCAGGCCGATCGCCAGCTCCGTGGCAGCGGTCACTAAGGACAGCCTGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
3UTR-3UTR CCA 90 bp CCGCTGCCACGGAGCTGGCGATCGGCCTGCATCTTCAAACCCAGGAGCAGGAGCTCACGGGAATCTTGTTaGGACAGCATTCCTTGGGGA +
Preference number: 2 (lower is better)
Translates to: PLPRSWRSACIFKPRSRSSRESC*DSIPWG
Trigger: TCCCCAAGGAATGCTGTCCCAACAAGATTCCCGTGA...GCTCCTGCTCCTGGGTTTGAAGATGCAGGCCGATCGCCAGCTCCGTGGCAGCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
3UTR-3UTR CCA 90 bp CGGGTGCTCTTTCACGGGAATCTTGTTGGGACAGCATTCCTTGGGGAGCGCCGGACCCAAGAACAGGTGTaGACGGGGCGGCACAGAAGT +
Preference number: 2 (lower is better)
Translates to: RVLFHGNLVGTAFLGERRTQEQV*TGRHRS
Trigger: ACTTCTGTGCCGCCCCGTCCACACCTGTTCTTGGGT...CCGGCGCTCCCCAAGGAATGCTGTCCCAACAAGATTCCCGTGAAAGAGCACCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
ENST00000530506.5
3UTR-3UTR CCA 90 bp TTAGTGACCGCTGCCACGGAGCTGGCGATCGGCCTGCATCTTCAAACCCAGGAGCCACCTCCAACACCCTaGCAGAAGCAGCTGCTCTCT +
Preference number: 2 (lower is better)
Translates to: LVTAATELAIGLHLQTQEPPPTP*QKQLLS
Trigger: AGAGAGCAGCTGCTTCTGCCAGGGTGTTGGAGGTGG...CTCCTGGGTTTGAAGATGCAGGCCGATCGCCAGCTCCGTGGCAGCGGTCACTAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
3UTR-3UTR CCA 90 bp TCCCAGGGGCCCCTCCGTCTGAGTGGTCGGCGTCTGCTGAACAAATACCATGTCCCACCTCCAACACCCTaGCAGAAGCAGCTGCTCTCT +
Preference number: 2 (lower is better)
Translates to: SQGPLRLSGRRLLNKYHVPPPTP*QKQLLS
Trigger: AGAGAGCAGCTGCTTCTGCCAGGGTGTTGGAGGTGG...GACATGGTATTTGTTCAGCAGACGCCGACCACTCAGACGGAGGGGCCCCTGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
3UTR-3UTR CCA 90 bp GTTGGGACAGCATTCCTTGGGGAGCGCCGGGTCGGCGTGTCCAAAGAGCGGGGGACAAAATGCCATGAATaGAATCGGAAGGCGCTCCAC +
Preference number: 2 (lower is better)
Translates to: VGTAFLGERRVGVSKERGTKCHE*NRKALH
Trigger: GTGGAGCGCCTTCCGATTCCATTCATGGCATTTTGT...CCCCCGCTCTTTGGACACGCCGACCCGGCGCTCCCCAAGGAATGCTGTCCCAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
3UTR-3UTR CCA 90 bp ACAGCAGCTCCCAAGCTGTCAGCAGTCGGCTGGCAGTGCCACCACACCCTCTCGTCCTCACTCCAGGTGTaGGTTCATTCTGCCTTCAGG +
Preference number: 2 (lower is better)
Translates to: TAAPKLSAVGWQCHHTLSSSLQV*VHSAFR
Trigger: CCTGAAGGCAGAATGAACCCACACCTGGAGTGAGGA...CGAGAGGGTGTGGTGGCACTGCCAGCCGACTGCTGACAGCTTGGGAGCTGCTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
3UTR-3UTR CCA 90 bp TGGCACAGTCAGGCTGTCCTTAGTGACCGCTGCCACGGAGCTGGCGATCGGCCTTCCTCACTCCAGGTGTaGGTTCATTCTGCCTTCAGG +
Preference number: 2 (lower is better)
Translates to: WHSQAVLSDRCHGAGDRPSSLQV*VHSAFR
Trigger: CCTGAAGGCAGAATGAACCCACACCTGGAGTGAGGA...AGGCCGATCGCCAGCTCCGTGGCAGCGGTCACTAAGGACAGCCTGACTGTGCCA
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
3UTR-3UTR TCA 90 bp AAAATCTGTCCTGTAGGCCAAGATGCTACACGCAGCGCCCAGGCAGTCAGAGGTTTTCCTCGCCCACGCTaGACCCACGTCCTGGGCACA +
Preference number: 2 (lower is better)
Translates to: KICPVGQDATRSAQAVRGFPRPR*THVLGT
Trigger: TGTGCCCAGGACGTGGGTTCAGCGTGGGCGAGGAAA...ACCTCTGACTGCCTGGGCGCTGCGTGTAGCATCTTGGCCTACAGGACAGATTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
3UTR-3UTR TCA 90 bp GAAAACCCACATGCACCCAAGAACAGGTGTGGACGGGGCGGCACAGAAGTCCACTCTGCAGCAGGGAGTTaGTGGCGGCATCCTTGTTCC +
Preference number: 2 (lower is better)
Translates to: ENPHAPKNRCGRGGTEVHSAAGS*WRHPCS
Trigger: GGAACAAGGATGCCGCCATCAACTCCCTGCTGCAGA...GTGGACTTCTGTGCCGCCCCGTCCACACCTGTTCTTGGGTGCATGTGGGTTTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530506.5
3UTR-3UTR GCA 90 bp GTCCGTTATCAGTGGGTTTACATCCGAAGGCCGGCGGCAAGACACTTGAACCACGCAGTCGGCTGGCAGTaGCACCACACCCTCTCGGAA +
Preference number: 2 (lower is better)
Translates to: VRYQWVYIRRPAARHLNHAVGWQ*HHTLSE
Trigger: TTCCGAGAGGGTGTGGTGGCACTGCCAGCCGACTGC...GTGGTTCAAGTGTCTTGCCGCCGGCCTTCGGATGTAAACCCACTGATAACGGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
3UTR-3UTR CCA 90 bp CCCACATGCACCCAAGAACAGGTGTGGACGGGGCGGCACAGAAGTCCACGGGAGTCACGGGAATCTTGTTaGGACAGCATTCCTTGGGGA +
Preference number: 2 (lower is better)
Translates to: PTCTQEQVWTGRHRSPRESRESC*DSIPWG
Trigger: TCCCCAAGGAATGCTGTCCCAACAAGATTCCCGTGA...CTCCCGTGGACTTCTGTGCCGCCCCGTCCACACCTGTTCTTGGGTGCATGTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
ENST00000530506.5
3UTR-3UTR CCA 90 bp CCCCGCCTGAGGCTCCAAGATGGCACAGTCAGGCTGTCCTTAGTGACCGCTGCCTCTGTCCGTTATCAGTaGGTTTACATCCGAAGGCCG +
Preference number: 2 (lower is better)
Translates to: PRLRLQDGTVRLSLVTAASVRYQ*VYIRRP
Trigger: CGGCCTTCGGATGTAAACCCACTGATAACGGACAGA...GGCAGCGGTCACTAAGGACAGCCTGACTGTGCCATCTTGGAGCCTCAGGCGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
3UTR-3UTR TCA 90 bp TTAGTGACCGCTGCCACGGAGCTGGCGATCGGCCTGCATCTTCAAACCCAGGAGGTTAGGGCAAGGGCGTaGGTTTTCGTCTGGGAAGTT +
Preference number: 2 (lower is better)
Translates to: LVTAATELAIGLHLQTQEVRARA*VFVWEV
Trigger: AACTTCCCAGACGAAAACTCACGCCCTTGCCCTAAC...CTCCTGGGTTTGAAGATGCAGGCCGATCGCCAGCTCCGTGGCAGCGGTCACTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
3UTR-3UTR GCA 90 bp GAGGGGGCGACACGGGTGCTCTTTCACGGGAATCTTGTTGGGACAGCATTCCTTTGCCAGGGACGCCCCTaGTTATTGGAAACGCATGCC +
Preference number: 2 (lower is better)
Translates to: EGATRVLFHGNLVGTAFLCQGRP*LLETHA
Trigger: GGCATGCGTTTCCAATAAGCAGGGGCGTCCCTGGCA...AAGGAATGCTGTCCCAACAAGATTCCCGTGAAAGAGCACCCGTGTCGCCCCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000530506.5
3UTR-3UTR CCA 90 bp CGCCCCGTCCTGGACCGCCAGGAACCGAAAACCCACATGCACCCAAGAACAGGTTCACGGGAATCTTGTTaGGACAGCATTCCTTGGGGA +
Preference number: 2 (lower is better)
Translates to: RPVLDRQEPKTHMHPRTGSRESC*DSIPWG
Trigger: TCCCCAAGGAATGCTGTCCCAACAAGATTCCCGTGA...ACCTGTTCTTGGGTGCATGTGGGTTTTCGGTTCCTGGCGGTCCAGGACGGGGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
ENST00000530506.5
3UTR-3UTR CCA 90 bp GTCAGGCTGTCCTTAGTGACCGCTGCCACGGAGCTGGCGATCGGCCTGCATCTTTCTGTCCGTTATCAGTaGGTTTACATCCGAAGGCCG +
Preference number: 2 (lower is better)
Translates to: VRLSLVTAATELAIGLHLSVRYQ*VYIRRP
Trigger: CGGCCTTCGGATGTAAACCCACTGATAACGGACAGA...AAGATGCAGGCCGATCGCCAGCTCCGTGGCAGCGGTCACTAAGGACAGCCTGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
3UTR-3UTR CCA 90 bp CGGCAAGCGTGGTCATCGGCAAAGGGTTGCTCTCCCTCCAGCGAGGCTGGCCCCCACCTTCATTCCCAATaGAGAAGAAATCTACACAGG +
Preference number: 2 (lower is better)
Translates to: RQAWSSAKGCSPSSEAGPHLHSQ*RRNLHR
Trigger: CCTGTGTAGATTTCTTCTCCATTGGGAATGAAGGTG...GGGGCCAGCCTCGCTGGAGGGAGAGCAACCCTTTGCCGATGACCACGCTTGCCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
3UTR-3UTR CCA 90 bp AAAACCCACATGCACCCAAGAACAGGTGTGGACGGGGCGGCACAGAAGTCCACGGACGCCCCTGCTTATTaGAAACGCATGCCTGGGCAT +
Preference number: 2 (lower is better)
Translates to: KTHMHPRTGVDGAAQKSTDAPAY*KRMPGH
Trigger: ATGCCCAGGCATGCGTTTCCAATAAGCAGGGGCGTC...CGTGGACTTCTGTGCCGCCCCGTCCACACCTGTTCTTGGGTGCATGTGGGTTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000530506.5
3UTR-3UTR CCA 90 bp GGGGGCGACACGGGTGCTCTTTCACGGGAATCTTGTTGGGACAGCATTCCTTGGGAGCGGATCACCTCCTaGTCCATGTTGGGGAACATG +
Preference number: 2 (lower is better)
Translates to: GGDTGALSRESCWDSIPWERITS*SMLGNM
Trigger: CATGTTCCCCAACATGGACCAGGAGGTGATCCGCTC...CCAAGGAATGCTGTCCCAACAAGATTCCCGTGAAAGAGCACCCGTGTCGCCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000530506.5
3UTR-3UTR GCA 90 bp TCCCAGGGGCCCCTCCGTCTGAGTGGTCGGCGTCTGCTGAACAAATACCATGTCACCCTCTCGGAATCATaGACAGTGCTGCCTCTATCA +
Preference number: 2 (lower is better)
Translates to: SQGPLRLSGRRLLNKYHVTLSES*TVLPLS
Trigger: TGATAGAGGCAGCACTGTGCATGATTCCGAGAGGGT...GACATGGTATTTGTTCAGCAGACGCCGACCACTCAGACGGAGGGGCCCCTGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
3UTR-3UTR GCA 90 bp TTAGTGACCGCTGCCACGGAGCTGGCGATCGGCCTGCATCTTCAAACCCAGGAGAGGGGCTCAGCAAGCTaGTTCTACAGTAAGCCACTT +
Preference number: 2 (lower is better)
Translates to: LVTAATELAIGLHLQTQERGSAS*FYSKPL
Trigger: AAGTGGCTTACTGTAGAAGCAGCTTGCTGAGCCCCT...CTCCTGGGTTTGAAGATGCAGGCCGATCGCCAGCTCCGTGGCAGCGGTCACTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
3UTR-3UTR CCA 90 bp CCGCTGCCACGGAGCTGGCGATCGGCCTGCATCTTCAAACCCAGGAGCAGGAGCGCTTGTGGTCTGTCCTaGGTTAGAGTTGTTAATATC +
Preference number: 2 (lower is better)
Translates to: PLPRSWRSACIFKPRSRSACGLS*VRVVNI
Trigger: GATATTAACAACTCTAACCCAGGACAGACCACAAGC...GCTCCTGCTCCTGGGTTTGAAGATGCAGGCCGATCGCCAGCTCCGTGGCAGCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
3UTR-3UTR TCA 90 bp AGGCAGTCAGAGGTAAGTGAGCGCCTCCCGCCTCAGAAAGCTTTTACAGGGCCATTTTCCAGAACGGCATaGGAAGGAGAGACGCACGTC +
Preference number: 2 (lower is better)
Translates to: RQSEVSERLPPQKAFTGPFSRTA*EGETHV
Trigger: GACGTGCGTCTCTCCTTCTCATGCCGTTCTGGAAAA...TGGCCCTGTAAAAGCTTTCTGAGGCGGGAGGCGCTCACTTACCTCTGACTGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
3UTR-3UTR GCA 90 bp CCACATGCACCCAAGAACAGGTGTGGACGGGGCGGCACAGAAGTCCACGGGAGGGTGAGGGATTGTGTGTaGCTTAAATCAACAGCTCTA +
Preference number: 2 (lower is better)
Translates to: PHAPKNRCGRGGTEVHGRVRDCV*LKSTAL
Trigger: TAGAGCTGTTGATTTAAGGCACACACAATCCCTCAC...CCTCCCGTGGACTTCTGTGCCGCCCCGTCCACACCTGTTCTTGGGTGCATGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
3UTR-3UTR CCA 90 bp ATTTCTGACTGTCATAACCAGGTGTCACCTAAAATCTGTCCTGTAGGCCAAGATCCTCCCAGCACGAGATaGGAGGGGAGCCCCCGCCCC +
Preference number: 2 (lower is better)
Translates to: ISDCHNQVSPKICPVGQDPPSTR*EGSPRP
Trigger: GGGGCGGGGGCTCCCCTCCCATCTCGTGCTGGGAGG...ATCTTGGCCTACAGGACAGATTTTAGGTGACACCTGGTTATGACAGTCAGAAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
3UTR-3UTR CCA 90 bp CGGGTGCTCTTTCACGGGAATCTTGTTGGGACAGCATTCCTTGGGGAGCGCCGGACAAAATGCCATGAATaGAATCGGAAGGCGCTCCAC +
Preference number: 2 (lower is better)
Translates to: RVLFHGNLVGTAFLGERRTKCHE*NRKALH
Trigger: GTGGAGCGCCTTCCGATTCCATTCATGGCATTTTGT...CCGGCGCTCCCCAAGGAATGCTGTCCCAACAAGATTCCCGTGAAAGAGCACCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
3UTR-3UTR CCA 90 bp AGGGCTGGCAGCAGGGGCCACGTCCTCTCTAGGAGACACCCACAGAGCCACATGCACCTTCATTCCCAATaGAGAAGAAATCTACACAGG +
Preference number: 2 (lower is better)
Translates to: RAGSRGHVLSRRHPQSHMHLHSQ*RRNLHR
Trigger: CCTGTGTAGATTTCTTCTCCATTGGGAATGAAGGTG...CATGTGGCTCTGTGGGTGTCTCCTAGAGAGGACGTGGCCCCTGCTGCCAGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
3UTR-3UTR CCA 90 bp TTAGTGACCGCTGCCACGGAGCTGGCGATCGGCCTGCATCTTCAAACCCAGGAGAAGAAAACTAAGAGATaGCGGCAAGCGTGGTCATCG +
Preference number: 2 (lower is better)
Translates to: LVTAATELAIGLHLQTQEKKTKR*RQAWSS
Trigger: CGATGACCACGCTTGCCGCCATCTCTTAGTTTTCTT...CTCCTGGGTTTGAAGATGCAGGCCGATCGCCAGCTCCGTGGCAGCGGTCACTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
3UTR-3UTR TCA 90 bp GTCCGTTATCAGTGGGTTTACATCCGAAGGCCGGCGGCAAGACACTTGAACCACTTTTCCAGAACGGCATaGGAAGGAGAGACGCACGTC +
Preference number: 2 (lower is better)
Translates to: VRYQWVYIRRPAARHLNHFSRTA*EGETHV
Trigger: GACGTGCGTCTCTCCTTCTCATGCCGTTCTGGAAAA...GTGGTTCAAGTGTCTTGCCGCCGGCCTTCGGATGTAAACCCACTGATAACGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
3UTR CAA 90 bp GTCCGTTATCAGTGGGTTTACATCCGAAGGCCGGCGGCAAGACACTaGAACCACAAACACCAGACATGCAGGTGTCTCAATGGCATGCAG +
Preference number: 2 (lower is better)
Translates to: VRYQWVYIRRPAARH*NHKHQTCRCLNGMQ
Trigger: CTGCATGCCATTGAGACACCTGCATGTCTGGTGTTTGTGGTTCAAGTGTCTTGCCGCCGGCCTTCGGATGTAAACCCACTGATAACGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
3UTR-3UTR TCA 90 bp AATTACATCACATCACAAAATGCCATGAATGGAATCGGAAGGCGCTCCACCACCGACAGGAGAGCGCGCTaGGACCTCCCAGCACGAGAT +
Preference number: 2 (lower is better)
Translates to: NYITSQNAMNGIGRRSTTDRRAR*DLPARD
Trigger: ATCTCGTGCTGGGAGGTCTCAGCGCGCTCTCCTGTC...GGTGGTGGAGCGCCTTCCGATTCCATTCATGGCATTTTGTGATGTGATGTAATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
3UTR-3UTR GCA 90 bp GTCAGGCTGTCCTTAGTGACCGCTGCCACGGAGCTGGCGATCGGCCTGCATCTTCATCACATCACAAAATaGCATGAATGGAATCGGAAG +
Preference number: 2 (lower is better)
Translates to: VRLSLVTAATELAIGLHLHHITK*HEWNRK
Trigger: CTTCCGATTCCATTCATGGCATTTTGTGATGTGATG...AAGATGCAGGCCGATCGCCAGCTCCGTGGCAGCGGTCACTAAGGACAGCCTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
3UTR-3UTR GCA 90 bp TTAGTGACCGCTGCCACGGAGCTGGCGATCGGCCTGCATCTTCAAACCCAGGAGGTGAGGGATTGTGTGTaGCTTAAATCAACAGCTCTA +
Preference number: 2 (lower is better)
Translates to: LVTAATELAIGLHLQTQEVRDCV*LKSTAL
Trigger: TAGAGCTGTTGATTTAAGGCACACACAATCCCTCAC...CTCCTGGGTTTGAAGATGCAGGCCGATCGCCAGCTCCGTGGCAGCGGTCACTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
3UTR-3UTR TCA 90 bp GTCCGTTATCAGTGGGTTTACATCCGAAGGCCGGCGGCAAGACACTTGAACCACCATCACAAAATGCCATaGATGGAATCGGAAGGCGCT +
Preference number: 2 (lower is better)
Translates to: VRYQWVYIRRPAARHLNHHHKMP*MESEGA
Trigger: AGCGCCTTCCGATTCCATTCATGGCATTTTGTGATG...GTGGTTCAAGTGTCTTGCCGCCGGCCTTCGGATGTAAACCCACTGATAACGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
3UTR-3UTR CCA 90 bp ATTTCTGACTGTCATAACCAGGTGTCACCTAAAATCTGTCCTGTAGGCCAAGATACCAGACCCAAGCCCTaGGCAGGGGCCAGGCTCACA +
Preference number: 2 (lower is better)
Translates to: ISDCHNQVSPKICPVGQDTRPKP*AGARLT
Trigger: TGTGAGCCTGGCCCCTGCCCAGGGCTTGGGTCTGGT...ATCTTGGCCTACAGGACAGATTTTAGGTGACACCTGGTTATGACAGTCAGAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
3UTR-3UTR TCA 90 bp TCCCAGGGGCCCCTCCGTCTGAGTGGTCGGCGTCTGCTGAACAAATACCATGTCAAAGTGCATCACTTGTaGGAAGCTTCTCAAATTTCT +
Preference number: 2 (lower is better)
Translates to: SQGPLRLSGRRLLNKYHVKVHHL*EASQIS
Trigger: AGAAATTTGAGAAGCTTCTCACAAGTGATGCACTTT...GACATGGTATTTGTTCAGCAGACGCCGACCACTCAGACGGAGGGGCCCCTGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
3UTR-3UTR GCA 90 bp AATTACATCACATCACAAAATGCCATGAATGGAATCGGAAGGCGCTCCACCACCAGGGGGCGACACGGGTaGTCTTTCACGGGAATCTTG +
Preference number: 2 (lower is better)
Translates to: NYITSQNAMNGIGRRSTTRGRHG*SFTGIL
Trigger: CAAGATTCCCGTGAAAGAGCACCCGTGTCGCCCCCT...GGTGGTGGAGCGCCTTCCGATTCCATTCATGGCATTTTGTGATGTGATGTAATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
3UTR-3UTR GCA 90 bp GGGGGCGACACGGGTGCTCTTTCACGGGAATCTTGTTGGGACAGCATTCCTTGGCATCACATCACAAAATaGCATGAATGGAATCGGAAG +
Preference number: 2 (lower is better)
Translates to: GGDTGALSRESCWDSIPWHHITK*HEWNRK
Trigger: CTTCCGATTCCATTCATGGCATTTTGTGATGTGATG...CCAAGGAATGCTGTCCCAACAAGATTCCCGTGAAAGAGCACCCGTGTCGCCCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
3UTR-3UTR CCA 90 bp ATTTCTGACTGTCATAACCAGGTGTCACCTAAAATCTGTCCTGTAGGCCAAGATGCTGAACCCACGTCCTaGGCACAGCAGCTCCCAAGC +
Preference number: 2 (lower is better)
Translates to: ISDCHNQVSPKICPVGQDAEPTS*AQQLPS
Trigger: GCTTGGGAGCTGCTGTGCCCAGGACGTGGGTTCAGC...ATCTTGGCCTACAGGACAGATTTTAGGTGACACCTGGTTATGACAGTCAGAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
3UTR-3UTR GCA 90 bp GCGACACGGGTGCTCTTTCACGGGAATCTTGTTGGGACAGCATTCCTTGGGGAGCATCACATCACAAAATaGCATGAATGGAATCGGAAG +
Preference number: 2 (lower is better)
Translates to: ATRVLFHGNLVGTAFLGEHHITK*HEWNRK
Trigger: CTTCCGATTCCATTCATGGCATTTTGTGATGTGATG...CTCCCCAAGGAATGCTGTCCCAACAAGATTCCCGTGAAAGAGCACCCGTGTCGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
3UTR-3UTR GCA 90 bp CTATTCCAATTACATCACATCACAAAATGCCATGAATGGAATCGGAAGGCGCTCAGGGGGCGACACGGGTaGTCTTTCACGGGAATCTTG +
Preference number: 2 (lower is better)
Translates to: LFQLHHITKCHEWNRKALRGRHG*SFTGIL
Trigger: CAAGATTCCCGTGAAAGAGCACCCGTGTCGCCCCCT...GAGCGCCTTCCGATTCCATTCATGGCATTTTGTGATGTGATGTAATTGGAATAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
3UTR-3UTR GCA 90 bp ACCCACAGTGTGAGGGATTGTGTGTGCCTTAAATCAACAGCTCTATTCCAATTAAGGGGGCGACACGGGTaGTCTTTCACGGGAATCTTG +
Preference number: 2 (lower is better)
Translates to: THSVRDCVCLKSTALFQLRGRHG*SFTGIL
Trigger: CAAGATTCCCGTGAAAGAGCACCCGTGTCGCCCCCT...TAATTGGAATAGAGCTGTTGATTTAAGGCACACACAATCCCTCACACTGTGGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
3UTR-3UTR GCA 90 bp AAAATCTGTCCTGTAGGCCAAGATGCTACACGCAGCGCCCAGGCAGTCAGAGGTCATCACATCACAAAATaGCATGAATGGAATCGGAAG +
Preference number: 2 (lower is better)
Translates to: KICPVGQDATRSAQAVRGHHITK*HEWNRK
Trigger: CTTCCGATTCCATTCATGGCATTTTGTGATGTGATG...ACCTCTGACTGCCTGGGCGCTGCGTGTAGCATCTTGGCCTACAGGACAGATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
3UTR-3UTR GCA 90 bp ATTTCTGACTGTCATAACCAGGTGTCACCTAAAATCTGTCCTGTAGGCCAAGATCCTGGCAGAAGCAGCTaGTCTCTACAGCAAGAGCAT +
Preference number: 2 (lower is better)
Translates to: ISDCHNQVSPKICPVGQDPGRSS*SLQQEH
Trigger: ATGCTCTTGCTGTAGAGAGCAGCTGCTTCTGCCAGG...ATCTTGGCCTACAGGACAGATTTTAGGTGACACCTGGTTATGACAGTCAGAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
3UTR-3UTR GCA 90 bp TGTCATAACCAGGTGTCACCTAAAATCTGTCCTGTAGGCCAAGATGCTACACGCGTGAGGGATTGTGTGTaGCTTAAATCAACAGCTCTA +
Preference number: 2 (lower is better)
Translates to: CHNQVSPKICPVGQDATRVRDCV*LKSTAL
Trigger: TAGAGCTGTTGATTTAAGGCACACACAATCCCTCAC...GCGTGTAGCATCTTGGCCTACAGGACAGATTTTAGGTGACACCTGGTTATGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
3UTR-3UTR TCA 90 bp ATTTCTGACTGTCATAACCAGGTGTCACCTAAAATCTGTCCTGTAGGCCAAGATCATCACAAAATGCCATaGATGGAATCGGAAGGCGCT +
Preference number: 2 (lower is better)
Translates to: ISDCHNQVSPKICPVGQDHHKMP*MESEGA
Trigger: AGCGCCTTCCGATTCCATTCATGGCATTTTGTGATG...ATCTTGGCCTACAGGACAGATTTTAGGTGACACCTGGTTATGACAGTCAGAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
3UTR-3UTR CAA 90 bp GCGCAGCAGGAGAGACGGACGGCAGCCTCCGGCGGGCGAAGGACCCGGCTTCAGTTGGGACAGCATTCCTaGGGGAGCGCCGGGTCGGCG +
Preference number: 3 (lower is better)
Translates to: AQQERRTAASGGRRTRLQLGQHS*GSAGSA
Trigger: CGCCGACCCGGCGCTCCCCAAGGAATGCTGTCCCAA...CTGAAGCCGGGTCCTTCGCCCGCCGGAGGCTGCCGTCCGTCTCTCCTGCTGCGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
3UTR CCA 72 bp GTTGCTCTCCCTCCAGCGAGGCTGGCCCCCACTGTGTaGGTCCCTCGGGCCCCCACACGGGCTGCTCAAGGG +
Preference number: 3 (lower is better)
Translates to: VALPPARLAPTV*VPRAPTRAAQG
Trigger: CCCTTGAGCAGCCCGTGTGGGGGCCCGAGGGACCCACACAGTGGGGGCCAGCCTCGCTGGAGGGAGAGCAAC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
3UTR GCA 72 bp CGGCAGCCTCCGGCGGGCGAAGGACCCGGCTTCAGATaGCCGCTGGCTGGCAATCAGGCAGAGCCTGGCCAA +
Preference number: 3 (lower is better)
Translates to: RQPPAGEGPGFR*PLAGNQAEPGQ
Trigger: TTGGCCAGGCTCTGCCTGATTGCCAGCCAGCGGGCATCTGAAGCCGGGTCCTTCGCCCGCCGGAGGCTGCCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
3UTR CCA 72 bp GGCGGGCGAAGGACCCGGCTTCAGATGCCCGCTGGCTaGCAATCAGGCAGAGCCTGGCCAACCGTGCCAGGC +
Preference number: 3 (lower is better)
Translates to: GGRRTRLQMPAG*QSGRAWPTVPG
Trigger: GCCTGGCACGGTTGGCCAGGCTCTGCCTGATTGCCAGCCAGCGGGCATCTGAAGCCGGGTCCTTCGCCCGCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
3UTR CCA 72 bp CTCCGGCGGGCGAAGGACCCGGCTTCAGATGCCCGCTaGCTGGCAATCAGGCAGAGCCTGGCCAACCGTGCC +
Preference number: 3 (lower is better)
Translates to: LRRAKDPASDAR*LAIRQSLANRA
Trigger: GGCACGGTTGGCCAGGCTCTGCCTGATTGCCAGCCAGCGGGCATCTGAAGCCGGGTCCTTCGCCCGCCGGAG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
3UTR TCA 72 bp CTCCAGGCCAAGGGAGGCAAGGCCATGGAGGGCCAGTaGCCCCGGCCTGGATGCTGCGGACTCAGACGGGCT +
Preference number: 3 (lower is better)
Translates to: LQAKGGKAMEGQ*PRPGCCGLRRA
Trigger: AGCCCGTCTGAGTCCGCAGCATCCAGGCCGGGGTCACTGGCCCTCCATGGCCTTGCCTCCCTTGGCCTGGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530506.5
3UTR CCA 72 bp GCACCCCAGCAACGCGAAGGCAGAAACCGGTGCTGGTaGCCACACCTGGGCGCCTGGACACCGAAGCCCCCA +
Preference number: 3 (lower is better)
Translates to: APQQREGRNRCW*PHLGAWTPKPP
Trigger: TGGGGGCTTCGGTGTCCAGGCGCCCAGGTGTGGCCACCAGCACCGGTTTCTGCCTTCGCGTTGCTGGGGTGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
3UTR CCA 72 bp ACTGCACCCCAGCAACGCGAAGGCAGAAACCGGTGCTaGTGGCCACACCTGGGCGCCTGGACACCGAAGCCC +
Preference number: 3 (lower is better)
Translates to: TAPQQREGRNRC*WPHLGAWTPKP
Trigger: GGGCTTCGGTGTCCAGGCGCCCAGGTGTGGCCACCAGCACCGGTTTCTGCCTTCGCGTTGCTGGGGTGCAGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
3UTR GCA 72 bp CCGCTGGCTGGCAATCAGGCAGAGCCTGGCCAACCGTaGCAGGCCCCCTTCCTCACTCCAGGTGTGGGTTCA +
Preference number: 3 (lower is better)
Translates to: PLAGNQAEPGQP*QAPFLTPGVGS
Trigger: TGAACCCACACCTGGAGTGAGGAAGGGGGCCTGGCACGGTTGGCCAGGCTCTGCCTGATTGCCAGCCAGCGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
3UTR CCA 72 bp CTTCAGATGCCCGCTGGCTGGCAATCAGGCAGAGCCTaGCCAACCGTGCCAGGCCCCCTTCCTCACTCCAGG +
Preference number: 3 (lower is better)
Translates to: LQMPAGWQSGRA*PTVPGPLPHSR
Trigger: CCTGGAGTGAGGAAGGGGGCCTGGCACGGTTGGCCAGGCTCTGCCTGATTGCCAGCCAGCGGGCATCTGAAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
3UTR CCA 72 bp GAGAAGAGAAGCTCCCTGGGAGGACACCCACGGAGCTaGCACGAGCGCAGCAGGAGAGACGGACGGCAGCCT +
Preference number: 3 (lower is better)
Translates to: EKRSSLGGHPRS*HERSRRDGRQP
Trigger: AGGCTGCCGTCCGTCTCTCCTGCTGCGCTCGTGCCAGCTCCGTGGGTGTCCTCCCAGGGAGCTTCTCTTCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
3UTR-3UTR CAA 90 bp CCCATCTGCAGCAGGGAGTTGATGGCGGCATCCTTGTTCCCTCGCTGGGCTTCCTTGGGACAGCATTCCTaGGGGAGCGCCGGGTCGGCG +
Preference number: 3 (lower is better)
Translates to: PICSRELMAASLFPRWASLGQHS*GSAGSA
Trigger: CGCCGACCCGGCGCTCCCCAAGGAATGCTGTCCCAA...GGAAGCCCAGCGAGGGAACAAGGATGCCGCCATCAACTCCCTGCTGCAGATGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530506.5
3UTR-3UTR CAA 90 bp TGCACCCAAGAACAGGTGTGGACGGGGCGGCACAGAAGTCCACGGGAGGGGGCGGGACGCCCCTGCTTATaGGAAACGCATGCCTGGGCA +
Preference number: 3 (lower is better)
Translates to: CTQEQVWTGRHRSPREGAGRPCL*ETHAWA
Trigger: TGCCCAGGCATGCGTTTCCAATAAGCAGGGGCGTCC...CGCCCCCTCCCGTGGACTTCTGTGCCGCCCCGTCCACACCTGTTCTTGGGTGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000530506.5
3UTR CCA 72 bp GGGGGCGACACGGGTGCTCTTTCACGGGAATCTTGTTaGGACAGCATTCCTTGGGGAGCGCCGGGTCGGCGT +
Preference number: 3 (lower is better)
Translates to: GGDTGALSRESC*DSIPWGAPGRR
Trigger: ACGCCGACCCGGCGCTCCCCAAGGAATGCTGTCCCAACAAGATTCCCGTGAAAGAGCACCCGTGTCGCCCCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
ENST00000530506.5
3UTR CCA 72 bp CCAGCCTCGCAAGGCCTGTTGAGAAGAGAAGCTCCCTaGGAGGACACCCACGGAGCTGGCACGAGCGCAGCA +
Preference number: 3 (lower is better)
Translates to: PASQGLLRREAP*EDTHGAGTSAA
Trigger: TGCTGCGCTCGTGCCAGCTCCGTGGGTGTCCTCCCAGGGAGCTTCTCTTCTCAACAGGCCTTGCGAGGCTGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
3UTR GCA 72 bp AAGAGATGGCGGCAAGCGTGGTCATCGGCAAAGGGTTaGTCTCCCTCCAGCGAGGCTGGCCCCCACTGTGTG +
Preference number: 3 (lower is better)
Translates to: KRWRQAWSSAKG*SPSSEAGPHCV
Trigger: CACACAGTGGGGGCCAGCCTCGCTGGAGGGAGAGCAACCCTTTGCCGATGACCACGCTTGCCGCCATCTCTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
3UTR CCA 72 bp AGCAGGGAGTTGATGGCGGCATCCTTGTTCCCTCGCTaGGCTTCCAGCACGGAGCGGATCACCTCCTGGTCC +
Preference number: 3 (lower is better)
Translates to: SRELMAASLFPR*ASSTERITSWS
Trigger: GGACCAGGAGGTGATCCGCTCCGTGCTGGAAGCCCAGCGAGGGAACAAGGATGCCGCCATCAACTCCCTGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527938.5
ENST00000530506.5
3UTR-3UTR CAA 90 bp GGGGGCGACACGGGTGCTCTTTCACGGGAATCTTGTTGGGACAGCATTCCTTGGTTGGGACAGCATTCCTaGGGGAGCGCCGGGTCGGCG +
Preference number: 3 (lower is better)
Translates to: GGDTGALSRESCWDSIPWLGQHS*GSAGSA
Trigger: CGCCGACCCGGCGCTCCCCAAGGAATGCTGTCCCAA...CCAAGGAATGCTGTCCCAACAAGATTCCCGTGAAAGAGCACCCGTGTCGCCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
ENST00000530506.5
3UTR GCA 72 bp GGCGGCACAGAAGTCCACGGGAGGGGGCGACACGGGTaGTCTTTCACGGGAATCTTGTTGGGACAGCATTCC +
Preference number: 3 (lower is better)
Translates to: GGTEVHGRGRHG*SFTGILLGQHS
Trigger: GGAATGCTGTCCCAACAAGATTCCCGTGAAAGAGCACCCGTGTCGCCCCCTCCCGTGGACTTCTGTGCCGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
ENST00000530506.5
3UTR GCA 72 bp CAGGCCCCCTTCCTCACTCCAGGTGTGGGTTCATTCTaGCTTCAGGCCGGAGTCTGTCACAAGGCTGGCTGG +
Preference number: 3 (lower is better)
Translates to: QAPFLTPGVGSF*LQAGVCHKAGW
Trigger: CCAGCCAGCCTTGTGACAGACTCCGGCCTGAAGGCAGAATGAACCCACACCTGGAGTGAGGAAGGGGGCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
3UTR GCA 72 bp CACAGAGCCACATGTGCACGCGTGTGGCAGTCTCACTaGACCCCAGCAACGCGAAGGCAGAAACCGGTGCTG +
Preference number: 3 (lower is better)
Translates to: HRATCARVWQSH*TPATRRQKPVL
Trigger: CAGCACCGGTTTCTGCCTTCGCGTTGCTGGGGTGCAGTGAGACTGCCACACGCGTGCACATGTGGCTCTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
3UTR CCA 72 bp GCTCTTTCACGGGAATCTTGTTGGGACAGCATTCCTTaGGGAGCGCCGGGTCGGCGTGTCCAAAGAGCGGGG +
Preference number: 3 (lower is better)
Translates to: ALSRESCWDSIP*GAPGRRVQRAG
Trigger: CCCCGCTCTTTGGACACGCCGACCCGGCGCTCCCCAAGGAATGCTGTCCCAACAAGATTCCCGTGAAAGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
ENST00000530506.5
3UTR CCA 72 bp CTAGGAGACACCCACAGAGCCACATGTGCACGCGTGTaGCAGTCTCACTGCACCCCAGCAACGCGAAGGCAG +
Preference number: 3 (lower is better)
Translates to: LGDTHRATCARV*QSHCTPATRRQ
Trigger: CTGCCTTCGCGTTGCTGGGGTGCAGTGAGACTGCCACACGCGTGCACATGTGGCTCTGTGGGTGTCTCCTAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
3UTR-3UTR CAA 90 bp CAGCAGGAGAGACGGACGGCAGCCTCCGGCGGGCGAAGGACCCGGCTTCAGATGTCTTTCACGGGAATCTaGTTGGGACAGCATTCCTTG +
Preference number: 3 (lower is better)
Translates to: QQERRTAASGGRRTRLQMSFTGI*LGQHSL
Trigger: CAAGGAATGCTGTCCCAACAAGATTCCCGTGAAAGA...CATCTGAAGCCGGGTCCTTCGCCCGCCGGAGGCTGCCGTCCGTCTCTCCTGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
3UTR-3UTR CAA 90 bp TGCCCGCTGGCTGGCAATCAGGCAGAGCCTGGCCAACCGTGCCAGGCCCCCTTCTCTTTCACGGGAATCTaGTTGGGACAGCATTCCTTG +
Preference number: 3 (lower is better)
Translates to: CPLAGNQAEPGQPCQAPFSFTGI*LGQHSL
Trigger: CAAGGAATGCTGTCCCAACAAGATTCCCGTGAAAGA...GAAGGGGGCCTGGCACGGTTGGCCAGGCTCTGCCTGATTGCCAGCCAGCGGGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
3UTR TCA 72 bp GATGCTACACGCAGCGCCCAGGCAGTCAGAGGTAAGTaGGCGCCTCCCGCCTCAGAAAGCTTTTACAGGGCC +
Preference number: 3 (lower is better)
Translates to: DATRSAQAVRGK*APPASESFYRA
Trigger: GGCCCTGTAAAAGCTTTCTGAGGCGGGAGGCGCTCACTTACCTCTGACTGCCTGGGCGCTGCGTGTAGCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
3UTR GCA 72 bp GGCAGTGCCACCACACCCTCTCGGAATCATGCACAGTaGTGCCTCTATCACCTCTCACCCCAGCCTCGCAAG +
Preference number: 3 (lower is better)
Translates to: GSATTPSRNHAQ*CLYHLSPQPRK
Trigger: CTTGCGAGGCTGGGGTGAGAGGTGATAGAGGCAGCACTGTGCATGATTCCGAGAGGGTGTGGTGGCACTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
3UTR GCA 72 bp ACAGCAGCTCCCAAGCTGTCAGCAGTCGGCTGGCAGTaGCACCACACCCTCTCGGAATCATGCACAGTGCTG +
Preference number: 3 (lower is better)
Translates to: TAAPKLSAVGWQ*HHTLSESCTVL
Trigger: CAGCACTGTGCATGATTCCGAGAGGGTGTGGTGGCACTGCCAGCCGACTGCTGACAGCTTGGGAGCTGCTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
3UTR GCA 72 bp GCATCGAGGCAGAGGCTCTATGGCTCCTCCCCCATCTaGAGCAGGGAGTTGATGGCGGCATCCTTGTTCCCT +
Preference number: 3 (lower is better)
Translates to: ASRQRLYGSSPI*SRELMAASLFP
Trigger: AGGGAACAAGGATGCCGCCATCAACTCCCTGCTGCAGATGGGGGAGGAGCCATAGAGCCTCTGCCTCGATGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000527938.5
ENST00000530506.5
3UTR GCA 72 bp CCAAGATGGCACAGTCAGGCTGTCCTTAGTGACCGCTaGCACGGAGCTGGCGATCGGCCTGCATCTTCAAAC +
Preference number: 3 (lower is better)
Translates to: PRWHSQAVLSDR*HGAGDRPASSN
Trigger: GTTTGAAGATGCAGGCCGATCGCCAGCTCCGTGGCAGCGGTCACTAAGGACAGCCTGACTGTGCCATCTTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
3UTR-3UTR CAA 90 bp AGACCCAAGCCCTGGGCAGGGGCCAGGCTCACAGCAAAGCGCGTTAGGGCAAGGTCTTTCACGGGAATCTaGTTGGGACAGCATTCCTTG +
Preference number: 3 (lower is better)
Translates to: RPKPWAGARLTAKRVRARSFTGI*LGQHSL
Trigger: CAAGGAATGCTGTCCCAACAAGATTCCCGTGAAAGA...CCTTGCCCTAACGCGCTTTGCTGTGAGCCTGGCCCCTGCCCAGGGCTTGGGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
3UTR-3UTR CAA 90 bp ACAGCAGCTCCCAAGCTGTCAGCAGTCGGCTGGCAGTGCCACCACACCCTCTCGTCTTTCACGGGAATCTaGTTGGGACAGCATTCCTTG +
Preference number: 3 (lower is better)
Translates to: TAAPKLSAVGWQCHHTLSSFTGI*LGQHSL
Trigger: CAAGGAATGCTGTCCCAACAAGATTCCCGTGAAAGA...CGAGAGGGTGTGGTGGCACTGCCAGCCGACTGCTGACAGCTTGGGAGCTGCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
3UTR CCA 72 bp TACAGCCCCAACGCGTCAGTGTCAGCTTCATCTAGATaGCCGTACTGTGCCAGGGACGCCCCTGCTTATTGG +
Preference number: 3 (lower is better)
Translates to: YSPNASVSASSR*PYCARDAPAYW
Trigger: CCAATAAGCAGGGGCGTCCCTGGCACAGTACGGCCATCTAGATGAAGCTGACACTGACGCGTTGGGGCTGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530506.5
3UTR CCA 72 bp CTTCCAGCACGGAGCGGATCACCTCCTGGTCCATGTTaGGGAACATGTCCTGGATGGCTTTCAGGTCCTCCT +
Preference number: 3 (lower is better)
Translates to: LPARSGSPPGPC*GTCPGWLSGPP
Trigger: AGGAGGACCTGAAAGCCATCCAGGACATGTTCCCCAACATGGACCAGGAGGTGATCCGCTCCGTGCTGGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527938.5
ENST00000530506.5
3UTR-3UTR CAA 90 bp TGTCATAACCAGGTGTCACCTAAAATCTGTCCTGTAGGCCAAGATGCTACACGCTTGGGACAGCATTCCTaGGGGAGCGCCGGGTCGGCG +
Preference number: 3 (lower is better)
Translates to: CHNQVSPKICPVGQDATRLGQHS*GSAGSA
Trigger: CGCCGACCCGGCGCTCCCCAAGGAATGCTGTCCCAA...GCGTGTAGCATCTTGGCCTACAGGACAGATTTTAGGTGACACCTGGTTATGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
3UTR-3UTR CAA 90 bp GGACTCAGACGGGCTCCAAGCAGGGTACAGCCCCAACGCGTCAGTGTCAGCTTCTCTTTCACGGGAATCTaGTTGGGACAGCATTCCTTG +
Preference number: 3 (lower is better)
Translates to: GLRRAPSRVQPQRVSVSFSFTGI*LGQHSL
Trigger: CAAGGAATGCTGTCCCAACAAGATTCCCGTGAAAGA...GAAGCTGACACTGACGCGTTGGGGCTGTACCCTGCTTGGAGCCCGTCTGAGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530506.5
3UTR TCA 72 bp TTCTTCAAAGGATCAAAGGCCTTTAGGACCCACAGCTaGAGAAGGCGCCTGCTGCCAGCATGTCCCTCCCCC +
Preference number: 3 (lower is better)
Translates to: FFKGSKAFRTHS*RRRLLPACPSP
Trigger: GGGGGAGGGACATGCTGGCAGCAGGCGCCTTCTTCAGCTGTGGGTCCTAAAGGCCTTTGATCCTTTGAAGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
3UTR GCA 72 bp GCGCTCCACCACCTCCAACACCCTGGCAGAAGCAGCTaGTCTCTACAGCAAGAGCATTTTCCAGAACGGCAT +
Preference number: 3 (lower is better)
Translates to: ALHHLQHPGRSS*SLQQEHFPERH
Trigger: ATGCCGTTCTGGAAAATGCTCTTGCTGTAGAGAGCAGCTGCTTCTGCCAGGGTGTTGGAGGTGGTGGAGCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
3UTR TCA 72 bp CTGCTCTCTACAGCAAGAGCATTTTCCAGAACGGCATaGGAAGGAGAGACGCACGTCCCAGGGACAGGAGAG +
Preference number: 3 (lower is better)
Translates to: LLSTARAFSRTA*EGETHVPGTGE
Trigger: CTCTCCTGTCCCTGGGACGTGCGTCTCTCCTTCTCATGCCGTTCTGGAAAATGCTCTTGCTGTAGAGAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
3UTR-3UTR CAA 90 bp CAAAATGCCATGAATGGAATCGGAAGGCGCTCCACCACCTCCAACACCCTGGCATTCACGGGAATCTTGTaGGGACAGCATTCCTTGGGG +
Preference number: 3 (lower is better)
Translates to: QNAMNGIGRRSTTSNTLAFTGIL*GQHSLG
Trigger: CCCCAAGGAATGCTGTCCCAACAAGATTCCCGTGAA...TGCCAGGGTGTTGGAGGTGGTGGAGCGCCTTCCGATTCCATTCATGGCATTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
3UTR CCA 72 bp CCCACTTGTGGGCATTCTCTTTCTGTCCGTTATCAGTaGGTTTACATCCGAAGGCCGGCGGCAAGACACTTG +
Preference number: 3 (lower is better)
Translates to: PTCGHSLSVRYQ*VYIRRPAARHL
Trigger: CAAGTGTCTTGCCGCCGGCCTTCGGATGTAAACCCACTGATAACGGACAGAAAGAGAATGCCCACAAGTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
3UTR TCA 72 bp CACGGAACATACCATCTAGAACGTTCCAGTCCCGCCTaGCACCTTCATTCCCAATGGAGAAGAAATCTACAC +
Preference number: 3 (lower is better)
Translates to: HGTYHLERSSPA*HLHSQWRRNLH
Trigger: GTGTAGATTTCTTCTCCATTGGGAATGAAGGTGTCAGGCGGGACTGGAACGTTCTAGATGGTATGTTCCGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
3UTR CCA 72 bp CTATTCCAATTACATCACATCACAAAATGCCATGAATaGAATCGGAAGGCGCTCCACCACCTCCAACACCCT +
Preference number: 3 (lower is better)
Translates to: LFQLHHITKCHE*NRKALHHLQHP
Trigger: AGGGTGTTGGAGGTGGTGGAGCGCCTTCCGATTCCATTCATGGCATTTTGTGATGTGATGTAATTGGAATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
3UTR CCA 72 bp TTCCTCCTTCTGCATCTTCCACAGAAGACCCACTTGTaGGCATTCTCTTTCTGTCCGTTATCAGTGGGTTTA +
Preference number: 3 (lower is better)
Translates to: FLLLHLPQKTHL*AFSFCPLSVGL
Trigger: TAAACCCACTGATAACGGACAGAAAGAGAATGCCCACAAGTGGGTCTTCTGTGGAAGATGCAGAAGGAGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
3UTR GCA 72 bp TCAACAGCTCTATTCCAATTACATCACATCACAAAATaGCATGAATGGAATCGGAAGGCGCTCCACCACCTC +
Preference number: 3 (lower is better)
Translates to: STALFQLHHITK*HEWNRKALHHL
Trigger: GAGGTGGTGGAGCGCCTTCCGATTCCATTCATGGCATTTTGTGATGTGATGTAATTGGAATAGAGCTGTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR TCA 90 bp GGACGGCAGCCTCCGGCGGGCGAAGGACCCGGCTTCAGATGCCCGCTGGCTGGCTACACCGGCCCGCGCTaGGTGCTGACGGTGGTCGCC +
Preference number: 4 (lower is better)
Translates to: GRQPPAGEGPGFRCPLAGYTGPR*VLTVVA
Trigger: GGCGACCACCGTCAGCACTCAGCGCGGGCCGGTGTA...GCCAGCCAGCGGGCATCTGAAGCCGGGTCCTTCGCCCGCCGGAGGCTGCCGTCC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317204.11
ENST00000525159.5
CDS-3UTR TCA 90 bp GCCCGCTGGCTGGCAATCAGGCAGAGCCTGGCCAACCGTGCCAGGCCCCCTTCCTCGCCGACCCGACAGTaGCGCGCCGGGCGACCTCCT +
Preference number: 4 (lower is better)
Translates to: ARWLAIRQSLANRARPPSSPTRQ*RAGRPP
Trigger: AGGAGGTCGCCCGGCGCGTCACTGTCGGGTCGGCGA...GGAAGGGGGCCTGGCACGGTTGGCCAGGCTCTGCCTGATTGCCAGCCAGCGGGC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
CDS-3UTR GCA 90 bp GCGCAGCAGGAGAGACGGACGGCAGCCTCCGGCGGGCGAAGGACCCGGCTTCAGGCCCACGGTGCCCACTaGGCCTCCGTACTGCAGCTG +
Preference number: 4 (lower is better)
Translates to: AQQERRTAASGGRRTRLQAHGAH*ASVLQL
Trigger: CAGCTGCAGTACGGAGGCGCAGTGGGCACCGTGGGC...CTGAAGCCGGGTCCTTCGCCCGCCGGAGGCTGCCGTCCGTCTCTCCTGCTGCGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR TCA 90 bp GGTGTGGACGGGGCGGCACAGAAGTCCACGGGAGGGGGCGACACGGGTGCTCTTGCCCGCGCTGAGTGCTaGCGGTGGTCGCCATGGTGC +
Preference number: 4 (lower is better)
Translates to: GVDGAAQKSTGGGDTGALARAEC*RWSPWC
Trigger: GCACCATGGCGACCACCGTCAGCACTCAGCGCGGGC...AAGAGCACCCGTGTCGCCCCCTCCCGTGGACTTCTGTGCCGCCCCGTCCACACC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317204.11
ENST00000525159.5
ENST00000530506.5
CDS-3UTR TCA 90 bp GGGAGCGCCGGGTCGGCGTGTCCAAAGAGCGGGGGCAAAACGGCATCGAGGCAGGCCATGGAGGGCCAGTaGCCCCGGCCTGGATGCTGC +
Preference number: 4 (lower is better)
Translates to: GSAGSACPKSGGKTASRQAMEGQ*PRPGCC
Trigger: GCAGCATCCAGGCCGGGGTCACTGGCCCTCCATGGC...CTGCCTCGATGCCGTTTTGCCCCCGCTCTTTGGACACGCCGACCCGGCGCTCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000530506.5
CDS-3UTR GCA 90 bp GGTGTGGACGGGGCGGCACAGAAGTCCACGGGAGGGGGCGACACGGGTGCTCTTGGCCCCCACACGGGCTaGTCAAGGGCTGGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: GVDGAAQKSTGGGDTGALGPHTG*SRAGSR
Trigger: CCTGCTGCCAGCCCTTGAGCAGCCCGTGTGGGGGCC...AAGAGCACCCGTGTCGCCCCCTCCCGTGGACTTCTGTGCCGCCCCGTCCACACC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR GCA 90 bp CCACGGAGCTGGCACGAGCGCAGCAGGAGAGACGGACGGCAGCCTCCGGCGGGCGTCCTTAGTGACCGCTaGCACGGAGCTGGCGATCGG +
Preference number: 4 (lower is better)
Translates to: PRSWHERSRRDGRQPPAGVLSDR*HGAGDR
Trigger: CCGATCGCCAGCTCCGTGGCAGCGGTCACTAAGGAC...GCCCGCCGGAGGCTGCCGTCCGTCTCTCCTGCTGCGCTCGTGCCAGCTCCGTGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR CCA 90 bp TGCACCCAAGAACAGGTGTGGACGGGGCGGCACAGAAGTCCACGGGAGGGGGCGCCTCCCAGCACGAGATaGGAGGGGAGCCCCCGCCCC +
Preference number: 4 (lower is better)
Translates to: CTQEQVWTGRHRSPREGAPPSTR*EGSPRP
Trigger: GGGGCGGGGGCTCCCCTCCCATCTCGTGCTGGGAGG...CGCCCCCTCCCGTGGACTTCTGTGCCGCCCCGTCCACACCTGTTCTTGGGTGCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR CCA 90 bp GGGACAGCATTCCTTGGGGAGCGCCGGGTCGGCGTGTCCAAAGAGCGGGGGCAACCTCCCAGCACGAGATaGGAGGGGAGCCCCCGCCCC +
Preference number: 4 (lower is better)
Translates to: GTAFLGERRVGVSKERGQPPSTR*EGSPRP
Trigger: GGGGCGGGGGCTCCCCTCCCATCTCGTGCTGGGAGG...TTGCCCCCGCTCTTTGGACACGCCGACCCGGCGCTCCCCAAGGAATGCTGTCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR CCA 90 bp GCGCAGCAGGAGAGACGGACGGCAGCCTCCGGCGGGCGAAGGACCCGGCTTCAGGGACACCCACGGAGCTaGCACGAGCGCAGCAGGAGA +
Preference number: 4 (lower is better)
Translates to: AQQERRTAASGGRRTRLQGHPRS*HERSRR
Trigger: TCTCCTGCTGCGCTCGTGCCAGCTCCGTGGGTGTCC...CTGAAGCCGGGTCCTTCGCCCGCCGGAGGCTGCCGTCCGTCTCTCCTGCTGCGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR CCA 90 bp GGTGTGGACGGGGCGGCACAGAAGTCCACGGGAGGGGGCGACACGGGTGCTCTTCTGGCCCCCACTGTGTaGGTCCCTCGGGCCCCCACA +
Preference number: 4 (lower is better)
Translates to: GVDGAAQKSTGGGDTGALLAPTV*VPRAPT
Trigger: TGTGGGGGCCCGAGGGACCCACACAGTGGGGGCCAG...AAGAGCACCCGTGTCGCCCCCTCCCGTGGACTTCTGTGCCGCCCCGTCCACACC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR TCA 90 bp GGGACAGCATTCCTTGGGGAGCGCCGGGTCGGCGTGTCCAAAGAGCGGGGGCAATACACCGGCCCGCGCTaGGTGCTGACGGTGGTCGCC +
Preference number: 4 (lower is better)
Translates to: GTAFLGERRVGVSKERGQYTGPR*VLTVVA
Trigger: GGCGACCACCGTCAGCACTCAGCGCGGGCCGGTGTA...TTGCCCCCGCTCTTTGGACACGCCGACCCGGCGCTCCCCAAGGAATGCTGTCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317204.11
ENST00000525159.5
CDS-3UTR GCA 90 bp CAGCAGGAGAGACGGACGGCAGCCTCCGGCGGGCGAAGGACCCGGCTTCAGATGGCCCCCGCCGGAGCCTaGGACGGAGACAGTTGTCAC +
Preference number: 4 (lower is better)
Translates to: QQERRTAASGGRRTRLQMAPAGA*DGDSCH
Trigger: GTGACAACTGTCTCCGTCGCAGGCTCCGGCGGGGGC...CATCTGAAGCCGGGTCCTTCGCCCGCCGGAGGCTGCCGTCCGTCTCTCCTGCTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
CDS-3UTR GCA 90 bp GGGAGGACACCCACGGAGCTGGCACGAGCGCAGCAGGAGAGACGGACGGCAGCCGAGCCTGGCCAACCGTaGCAGGCCCCCTTCCTCACT +
Preference number: 4 (lower is better)
Translates to: GRTPTELARAQQERRTAAEPGQP*QAPFLT
Trigger: AGTGAGGAAGGGGGCCTGGCACGGTTGGCCAGGCTC...GGCTGCCGTCCGTCTCTCCTGCTGCGCTCGTGCCAGCTCCGTGGGTGTCCTCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR GCA 90 bp GGACGGCAGCCTCCGGCGGGCGAAGGACCCGGCTTCAGATGCCCGCTGGCTGGCTCCTGTAGGCCAAGATaGTACACGCAGCGCCCAGGC +
Preference number: 4 (lower is better)
Translates to: GRQPPAGEGPGFRCPLAGSCRPR*YTQRPG
Trigger: GCCTGGGCGCTGCGTGTAGCATCTTGGCCTACAGGA...GCCAGCCAGCGGGCATCTGAAGCCGGGTCCTTCGCCCGCCGGAGGCTGCCGTCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR GCA 90 bp GCGCAGCAGGAGAGACGGACGGCAGCCTCCGGCGGGCGAAGGACCCGGCTTCAGGAAGGCAGAAACCGGTaGTGGTGGCCACACCTGGGC +
Preference number: 4 (lower is better)
Translates to: AQQERRTAASGGRRTRLQEGRNR*WWPHLG
Trigger: GCCCAGGTGTGGCCACCAGCACCGGTTTCTGCCTTC...CTGAAGCCGGGTCCTTCGCCCGCCGGAGGCTGCCGTCCGTCTCTCCTGCTGCGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR GCA 90 bp CGCACGTCCCAGGGACAGGAGAGCGCGCTGAGACCTCCCAGCACGAGATGGGAGGGCCCCCACACGGGCTaGTCAAGGGCTGGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: RTSQGQESALRPPSTRWEGPHTG*SRAGSR
Trigger: CCTGCTGCCAGCCCTTGAGCAGCCCGTGTGGGGGCC...CTCCCATCTCGTGCTGGGAGGTCTCAGCGCGCTCTCCTGTCCCTGGGACGTGCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR CCA 90 bp GGACGGCAGCCTCCGGCGGGCGAAGGACCCGGCTTCAGATGCCCGCTGGCTGGCGAAAGAGTCCACGCCTaGGGGCACCGTGCAGTGGAT +
Preference number: 4 (lower is better)
Translates to: GRQPPAGEGPGFRCPLAGERVHA*GHRAVD
Trigger: ATCCACTGCACGGTGCCCCCAGGCGTGGACTCTTTC...GCCAGCCAGCGGGCATCTGAAGCCGGGTCCTTCGCCCGCCGGAGGCTGCCGTCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000527886.5
CDS-3UTR CCA 90 bp GGGAGGACACCCACGGAGCTGGCACGAGCGCAGCAGGAGAGACGGACGGCAGCCAGGCTGGCTGGACAGTaGCCAGGTGAGCCAGGCCAG +
Preference number: 4 (lower is better)
Translates to: GRTPTELARAQQERRTAARLAGQ*PGEPGQ
Trigger: CTGGCCTGGCTCACCTGGCCACTGTCCAGCCAGCCT...GGCTGCCGTCCGTCTCTCCTGCTGCGCTCGTGCCAGCTCCGTGGGTGTCCTCCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR CCA 90 bp TGCCCGCTGGCTGGCAATCAGGCAGAGCCTGGCCAACCGTGCCAGGCCCCCTTCCCACACCTGGGCGCCTaGACACCGAAGCCCCCAGCA +
Preference number: 4 (lower is better)
Translates to: CPLAGNQAEPGQPCQAPFPHLGA*TPKPPA
Trigger: TGCTGGGGGCTTCGGTGTCCAGGCGCCCAGGTGTGG...GAAGGGGGCCTGGCACGGTTGGCCAGGCTCTGCCTGATTGCCAGCCAGCGGGCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR CCA 90 bp GGGAGCGCCGGGTCGGCGTGTCCAAAGAGCGGGGGCAAAACGGCATCGAGGCAGCCACACCTGGGCGCCTaGACACCGAAGCCCCCAGCA +
Preference number: 4 (lower is better)
Translates to: GSAGSACPKSGGKTASRQPHLGA*TPKPPA
Trigger: TGCTGGGGGCTTCGGTGTCCAGGCGCCCAGGTGTGG...CTGCCTCGATGCCGTTTTGCCCCCGCTCTTTGGACACGCCGACCCGGCGCTCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR CCA 90 bp GCCCGCTGGCTGGCAATCAGGCAGAGCCTGGCCAACCGTGCCAGGCCCCCTTCCAGAAACCGGTGCTGGTaGCCACACCTGGGCGCCTGG +
Preference number: 4 (lower is better)
Translates to: ARWLAIRQSLANRARPPSRNRCW*PHLGAW
Trigger: CCAGGCGCCCAGGTGTGGCCACCAGCACCGGTTTCT...GGAAGGGGGCCTGGCACGGTTGGCCAGGCTCTGCCTGATTGCCAGCCAGCGGGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR CCA 90 bp TGGACGGGGCGGCACAGAAGTCCACGGGAGGGGGCGACACGGGTGCTCTTTCACGGCTGGGGGCTCCGGTaGGGCGTCAGGTGGACGAGT +
Preference number: 4 (lower is better)
Translates to: WTGRHRSPREGATRVLFHGWGLR*GVRWTS
Trigger: ACTCGTCCACCTGACGCCCCACCGGAGCCCCCAGCC...GTGAAAGAGCACCCGTGTCGCCCCCTCCCGTGGACTTCTGTGCCGCCCCGTCCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000530506.5
CDS-3UTR TCA 90 bp CGGCATCCTTGTTCCCTCGCTGGGCTTCCAGCACGGAGCGGATCACCTCCTGGTTCGCCGACCCGACAGTaGCGCGCCGGGCGACCTCCT +
Preference number: 4 (lower is better)
Translates to: RHPCSLAGLPARSGSPPGSPTRQ*RAGRPP
Trigger: AGGAGGTCGCCCGGCGCGTCACTGTCGGGTCGGCGA...ACCAGGAGGTGATCCGCTCCGTGCTGGAAGCCCAGCGAGGGAACAAGGATGCCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527938.5
ENST00000530506.5
CDS-3UTR TCA 90 bp GCGGCATCCTTGTTCCCTCGCTGGGCTTCCAGCACGGAGCGGATCACCTCCTGGTACACCGGCCCGCGCTaGGTGCTGACGGTGGTCGCC +
Preference number: 4 (lower is better)
Translates to: AASLFPRWASSTERITSWYTGPR*VLTVVA
Trigger: GGCGACCACCGTCAGCACTCAGCGCGGGCCGGTGTA...CCAGGAGGTGATCCGCTCCGTGCTGGAAGCCCAGCGAGGGAACAAGGATGCCGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527938.5
CDS-3UTR TCA 90 bp GGAGCGCCGGGTCGGCGTGTCCAAAGAGCGGGGGCAAAACGGCATCGAGGCAGACTCCGGAGCCCCGCCTaGGGCTCCAAGATGGCACAG +
Preference number: 4 (lower is better)
Translates to: GAPGRRVQRAGAKRHRGRLRSPA*GSKMAQ
Trigger: CTGTGCCATCTTGGAGCCTCAGGCGGGGCTCCGGAG...TCTGCCTCGATGCCGTTTTGCCCCCGCTCTTTGGACACGCCGACCCGGCGCTCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR GCA 90 bp TGGACGGGGCGGCACAGAAGTCCACGGGAGGGGGCGACACGGGTGCTCTTTCACGCCCACGGTGCCCACTaGGCCTCCGTACTGCAGCTG +
Preference number: 4 (lower is better)
Translates to: WTGRHRSPREGATRVLFHAHGAH*ASVLQL
Trigger: CAGCTGCAGTACGGAGGCGCAGTGGGCACCGTGGGC...GTGAAAGAGCACCCGTGTCGCCCCCTCCCGTGGACTTCTGTGCCGCCCCGTCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR GCA 90 bp CCACGGAGCTGGCACGAGCGCAGCAGGAGAGACGGACGGCAGCCTCCGGCGGGCTGTGGGTCCAGGCAATaGGGTCGTCCATGGAGAAGG +
Preference number: 4 (lower is better)
Translates to: PRSWHERSRRDGRQPPAGCGSRQ*GRPWRR
Trigger: CCTTCTCCATGGACGACCGCATTGCCTGGACCCACA...GCCCGCCGGAGGCTGCCGTCCGTCTCTCCTGCTGCGCTCGTGCCAGCTCCGTGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR GCA 90 bp GCGGCATCCTTGTTCCCTCGCTGGGCTTCCAGCACGGAGCGGATCACCTCCTGGGGGCCACGGGCACCATaGCGGGGCTACAGACAGCGG +
Preference number: 4 (lower is better)
Translates to: AASLFPRWASSTERITSWGPRAP*RGYRQR
Trigger: CCGCTGTCTGTAGCCCCGGCATGGTGCCCGTGGCCC...CCAGGAGGTGATCCGCTCCGTGCTGGAAGCCCAGCGAGGGAACAAGGATGCCGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000527938.5
ENST00000530506.5
CDS-3UTR GCA 90 bp GCCCGCTGGCTGGCAATCAGGCAGAGCCTGGCCAACCGTGCCAGGCCCCCTTCCGCTGAAGAAGGCGCCTaGTGCCAGCATGTCCCTCCC +
Preference number: 4 (lower is better)
Translates to: ARWLAIRQSLANRARPPSAEEGA*CQHVPP
Trigger: GGGAGGGACATGCTGGCAGCAGGCGCCTTCTTCAGC...GGAAGGGGGCCTGGCACGGTTGGCCAGGCTCTGCCTGATTGCCAGCCAGCGGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR GCA 90 bp AGCCCTGGGCAGGGGCCAGGCTCACAGCAAAGCGCGTTAGGGCAAGGGCGTGAGTCCTGCCTGGCACCCTaGAGGGTAGCGCCCAGGGAG +
Preference number: 4 (lower is better)
Translates to: SPGQGPGSQQSALGQGRESCLAP*RVAPRE
Trigger: CTCCCTGGGCGCTACCCTGCAGGGTGCCAGGCAGGA...CTCACGCCCTTGCCCTAACGCGCTTTGCTGTGAGCCTGGCCCCTGCCCAGGGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR CCA 90 bp TGGACGGGGCGGCACAGAAGTCCACGGGAGGGGGCGACACGGGTGCTCTTTCACCGTCCAGCTGGACGGTaGTCGCCATGGTGCTGCGGC +
Preference number: 4 (lower is better)
Translates to: WTGRHRSPREGATRVLFHRPAGR*SPWCCG
Trigger: GCCGCAGCACCATGGCGACCACCGTCCAGCTGGACG...GTGAAAGAGCACCCGTGTCGCCCCCTCCCGTGGACTTCTGTGCCGCCCCGTCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263646.11
CDS-3UTR CCA 90 bp CCGCTGCCACGGAGCTGGCGATCGGCCTGCATCTTCAAACCCAGGAGCAGGAGCCCGTACTGCAGCTGCTaGGCCGCCTGGGCGTCCAGC +
Preference number: 4 (lower is better)
Translates to: PLPRSWRSACIFKPRSRSPYCSC*AAWASS
Trigger: GCTGGACGCCCAGGCGGCCCAGCAGCTGCAGTACGG...GCTCCTGCTCCTGGGTTTGAAGATGCAGGCCGATCGCCAGCTCCGTGGCAGCGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR CCA 90 bp AGGGCTGGCAGCAGGGGCCACGTCCTCTCTAGGAGACACCCACAGAGCCACATGTCGCTACAGCGGGGCTaGGCGTTCACGGCGGCCGGG +
Preference number: 4 (lower is better)
Translates to: RAGSRGHVLSRRHPQSHMSLQRG*AFTAAG
Trigger: CCCGGCCGCCGTGAACGCCCAGCCCCGCTGTAGCGA...CATGTGGCTCTGTGGGTGTCTCCTAGAGAGGACGTGGCCCCTGCTGCCAGCCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR CCA 90 bp GGTGTGGACGGGGCGGCACAGAAGTCCACGGGAGGGGGCGACACGGGTGCTCTTTGGGACAGCATTCCTTaGGGAGCGCCGGGTCGGCGT +
Preference number: 4 (lower is better)
Translates to: GVDGAAQKSTGGGDTGALWDSIP*GAPGRR
Trigger: ACGCCGACCCGGCGCTCCCCAAGGAATGCTGTCCCA...AAGAGCACCCGTGTCGCCCCCTCCCGTGGACTTCTGTGCCGCCCCGTCCACACC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
ENST00000530506.5
CDS-3UTR CCA 90 bp TGGACGGGGCGGCACAGAAGTCCACGGGAGGGGGCGACACGGGTGCTCTTTCACGCCCCCGCCCCGTCCTaGACCGCCAGGAACCGAAAA +
Preference number: 4 (lower is better)
Translates to: WTGRHRSPREGATRVLFHAPAPS*TARNRK
Trigger: TTTTCGGTTCCTGGCGGTCCAGGACGGGGCGGGGGC...GTGAAAGAGCACCCGTGTCGCCCCCTCCCGTGGACTTCTGTGCCGCCCCGTCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
ENST00000530506.5
CDS-3UTR CCA 90 bp TGGCACAGTCAGGCTGTCCTTAGTGACCGCTGCCACGGAGCTGGCGATCGGCCTCCTCCCAGCACGAGATaGGAGGGGAGCCCCCGCCCC +
Preference number: 4 (lower is better)
Translates to: WHSQAVLSDRCHGAGDRPPPSTR*EGSPRP
Trigger: GGGGCGGGGGCTCCCCTCCCATCTCGTGCTGGGAGG...AGGCCGATCGCCAGCTCCGTGGCAGCGGTCACTAAGGACAGCCTGACTGTGCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR CCA 90 bp CCACGGAGCTGGCACGAGCGCAGCAGGAGAGACGGACGGCAGCCTCCGGCGGGCCCACCTCCAACACCCTaGCAGAAGCAGCTGCTCTCT +
Preference number: 4 (lower is better)
Translates to: PRSWHERSRRDGRQPPAGPPPTP*QKQLLS
Trigger: AGAGAGCAGCTGCTTCTGCCAGGGTGTTGGAGGTGG...GCCCGCCGGAGGCTGCCGTCCGTCTCTCCTGCTGCGCTCGTGCCAGCTCCGTGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR CCA 90 bp GGGAGGACACCCACGGAGCTGGCACGAGCGCAGCAGGAGAGACGGACGGCAGCCCTGTCAGCAGTCGGCTaGCAGTGCCACCACACCCTC +
Preference number: 4 (lower is better)
Translates to: GRTPTELARAQQERRTAALSAVG*QCHHTL
Trigger: GAGGGTGTGGTGGCACTGCCAGCCGACTGCTGACAG...GGCTGCCGTCCGTCTCTCCTGCTGCGCTCGTGCCAGCTCCGTGGGTGTCCTCCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR CCA 90 bp GTTGGGACAGCATTCCTTGGGGAGCGCCGGGTCGGCGTGTCCAAAGAGCGGGGGGGCAGAAACCGGTGCTaGTGGCCACACCTGGGCGCC +
Preference number: 4 (lower is better)
Translates to: VGTAFLGERRVGVSKERGGRNRC*WPHLGA
Trigger: GGCGCCCAGGTGTGGCCACCAGCACCGGTTTCTGCC...CCCCCGCTCTTTGGACACGCCGACCCGGCGCTCCCCAAGGAATGCTGTCCCAAC
69% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR TCA 90 bp CCCCGCCTGAGGCTCCAAGATGGCACAGTCAGGCTGTCCTTAGTGACCGCTGCCGCCCGCGCTGAGTGCTaGCGGTGGTCGCCATGGTGC +
Preference number: 4 (lower is better)
Translates to: PRLRLQDGTVRLSLVTAAARAEC*RWSPWC
Trigger: GCACCATGGCGACCACCGTCAGCACTCAGCGCGGGC...GGCAGCGGTCACTAAGGACAGCCTGACTGTGCCATCTTGGAGCCTCAGGCGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317204.11
ENST00000525159.5
CDS-3UTR GCA 90 bp GACCGCCAGGAACCGAAAACCCACATGCACCCAAGAACAGGTGTGGACGGGGCGTGGTCGCCATGGTGCTaGGGCGGCCCCCGTGGCTCG +
Preference number: 4 (lower is better)
Translates to: DRQEPKTHMHPRTGVDGAWSPWC*GGPRGS
Trigger: CGAGCCACGGGGGCCGCCGCAGCACCATGGCGACCA...CGCCCCGTCCACACCTGTTCTTGGGTGCATGTGGGTTTTCGGTTCCTGGCGGTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000530506.5
CDS-3UTR GCA 90 bp CAGCAGGAGAGACGGACGGCAGCCTCCGGCGGGCGAAGGACCCGGCTTCAGATGTCCTCCACCTTGCCCTaGCTCAGGGACTCCGGGATG +
Preference number: 4 (lower is better)
Translates to: QQERRTAASGGRRTRLQMSSTLP*LRDSGM
Trigger: CATCCCGGAGTCCCTGAGGCAGGGCAAGGTGGAGGA...CATCTGAAGCCGGGTCCTTCGCCCGCCGGAGGCTGCCGTCCGTCTCTCCTGCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR GCA 90 bp GCGCAGCAGGAGAGACGGACGGCAGCCTCCGGCGGGCGAAGGACCCGGCTTCAGATGCGGAGGAAGTCCTaGGGGAGCTCACCGATGTAC +
Preference number: 4 (lower is better)
Translates to: AQQERRTAASGGRRTRLQMRRKS*GSSPMY
Trigger: GTACATCGGTGAGCTCCCGCAGGACTTCCTCCGCAT...CTGAAGCCGGGTCCTTCGCCCGCCGGAGGCTGCCGTCCGTCTCTCCTGCTGCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR GCA 90 bp CAGCAGGAGAGACGGACGGCAGCCTCCGGCGGGCGAAGGACCCGGCTTCAGATGGCTGAAGAAGGCGCCTaGTGCCAGCATGTCCCTCCC +
Preference number: 4 (lower is better)
Translates to: QQERRTAASGGRRTRLQMAEEGA*CQHVPP
Trigger: GGGAGGGACATGCTGGCAGCAGGCGCCTTCTTCAGC...CATCTGAAGCCGGGTCCTTCGCCCGCCGGAGGCTGCCGTCCGTCTCTCCTGCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR CCA 90 bp CCTCTCACCCCAGCCTCGCAAGGCCTGTTGAGAAGAGAAGCTCCCTGGGAGGACGGACGGTGGTCGCCATaGTGCTGCGGCGGCCCCCGT +
Preference number: 4 (lower is better)
Translates to: PLTPASQGLLRREAPWEDGRWSP*CCGGPR
Trigger: ACGGGGGCCGCCGCAGCACCATGGCGACCACCGTCC...GTCCTCCCAGGGAGCTTCTCTTCTCAACAGGCCTTGCGAGGCTGGGGTGAGAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263646.11
CDS-3UTR CCA 90 bp GGTGTGGACGGGGCGGCACAGAAGTCCACGGGAGGGGGCGACACGGGTGCTCTTCGCCATTGTGTGCCGTaGGCGTCTCGTACACCGCGT +
Preference number: 4 (lower is better)
Translates to: GVDGAAQKSTGGGDTGALRHCVP*ASRTPR
Trigger: ACGCGGTGTACGAGACGCCCACGGCACACAATGGCG...AAGAGCACCCGTGTCGCCCCCTCCCGTGGACTTCTGTGCCGCCCCGTCCACACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000527886.5
ENST00000530506.5
CDS-3UTR CCA 90 bp GCCCGCTGGCTGGCAATCAGGCAGAGCCTGGCCAACCGTGCCAGGCCCCCTTCCTCCGGGATGGTGATGTaGGTCCAGGCAATGCGGTCG +
Preference number: 4 (lower is better)
Translates to: ARWLAIRQSLANRARPPSSGMVM*VQAMRS
Trigger: CGACCGCATTGCCTGGACCCACATCACCATCCCGGA...GGAAGGGGGCCTGGCACGGTTGGCCAGGCTCTGCCTGATTGCCAGCCAGCGGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR CCA 90 bp CGGGAATCTTGTTGGGACAGCATTCCTTGGGGAGCGCCGGGTCGGCGTGTCCAATCGCTACAGCGGGGCTaGGCGTTCACGGCGGCCGGG +
Preference number: 4 (lower is better)
Translates to: RESCWDSIPWGAPGRRVQSLQRG*AFTAAG
Trigger: CCCGGCCGCCGTGAACGCCCAGCCCCGCTGTAGCGA...TTGGACACGCCGACCCGGCGCTCCCCAAGGAATGCTGTCCCAACAAGATTCCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
ENST00000530506.5
CDS-3UTR CCA 90 bp TCCAAAGAGCGGGGGCAAAACGGCATCGAGGCAGAGGCTCTATGGCTCCTCCCCTCGCTACAGCGGGGCTaGGCGTTCACGGCGGCCGGG +
Preference number: 4 (lower is better)
Translates to: SKERGQNGIEAEALWLLPSLQRG*AFTAAG
Trigger: CCCGGCCGCCGTGAACGCCCAGCCCCGCTGTAGCGA...GGGGAGGAGCCATAGAGCCTCTGCCTCGATGCCGTTTTGCCCCCGCTCTTTGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000530506.5
CDS-3UTR CCA 90 bp AGACCCAAGCCCTGGGCAGGGGCCAGGCTCACAGCAAAGCGCGTTAGGGCAAGGGCCCCCGCCCCGTCCTaGACCGCCAGGAACCGAAAA +
Preference number: 4 (lower is better)
Translates to: RPKPWAGARLTAKRVRARAPAPS*TARNRK
Trigger: TTTTCGGTTCCTGGCGGTCCAGGACGGGGCGGGGGC...CCTTGCCCTAACGCGCTTTGCTGTGAGCCTGGCCCCTGCCCAGGGCTTGGGTCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR CCA 90 bp GGGACAGCATTCCTTGGGGAGCGCCGGGTCGGCGTGTCCAAAGAGCGGGGGCAAACCAGACCCAAGCCCTaGGCAGGGGCCAGGCTCACA +
Preference number: 4 (lower is better)
Translates to: GTAFLGERRVGVSKERGQTRPKP*AGARLT
Trigger: TGTGAGCCTGGCCCCTGCCCAGGGCTTGGGTCTGGT...TTGCCCCCGCTCTTTGGACACGCCGACCCGGCGCTCCCCAAGGAATGCTGTCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR CCA 90 bp CGGCAAGCGTGGTCATCGGCAAAGGGTTGCTCTCCCTCCAGCGAGGCTGGCCCCACCAGACCCAAGCCCTaGGCAGGGGCCAGGCTCACA +
Preference number: 4 (lower is better)
Translates to: RQAWSSAKGCSPSSEAGPTRPKP*AGARLT
Trigger: TGTGAGCCTGGCCCCTGCCCAGGGCTTGGGTCTGGT...GGGGCCAGCCTCGCTGGAGGGAGAGCAACCCTTTGCCGATGACCACGCTTGCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR CCA 90 bp GCGCAGCAGGAGAGACGGACGGCAGCCTCCGGCGGGCGAAGGACCCGGCTTCAGAGTCTGTCACAAGGCTaGCTGGACAGTGGCCAGGTG +
Preference number: 4 (lower is better)
Translates to: AQQERRTAASGGRRTRLQSLSQG*LDSGQV
Trigger: CACCTGGCCACTGTCCAGCCAGCCTTGTGACAGACT...CTGAAGCCGGGTCCTTCGCCCGCCGGAGGCTGCCGTCCGTCTCTCCTGCTGCGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR CCA 90 bp TGGCACAGTCAGGCTGTCCTTAGTGACCGCTGCCACGGAGCTGGCGATCGGCCTAGCTGCTGGGCCGCCTaGGCGTCCAGCTGGACCTGC +
Preference number: 4 (lower is better)
Translates to: WHSQAVLSDRCHGAGDRPSCWAA*ASSWTC
Trigger: GCAGGTCCAGCTGGACGCCCAGGCGGCCCAGCAGCT...AGGCCGATCGCCAGCTCCGTGGCAGCGGTCACTAAGGACAGCCTGACTGTGCCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR CCA 90 bp CTCCCCCATCTGCAGCAGGGAGTTGATGGCGGCATCCTTGTTCCCTCGCTGGGCAGCTGCTGGGCCGCCTaGGCGTCCAGCTGGACCTGC +
Preference number: 4 (lower is better)
Translates to: LPHLQQGVDGGILVPSLGSCWAA*ASSWTC
Trigger: GCAGGTCCAGCTGGACGCCCAGGCGGCCCAGCAGCT...GCCCAGCGAGGGAACAAGGATGCCGCCATCAACTCCCTGCTGCAGATGGGGGAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527938.5
CDS-3UTR CCA 90 bp TGGACGGGGCGGCACAGAAGTCCACGGGAGGGGGCGACACGGGTGCTCTTTCACAGAAACCGGTGCTGGTaGCCACACCTGGGCGCCTGG +
Preference number: 4 (lower is better)
Translates to: WTGRHRSPREGATRVLFHRNRCW*PHLGAW
Trigger: CCAGGCGCCCAGGTGTGGCCACCAGCACCGGTTTCT...GTGAAAGAGCACCCGTGTCGCCCCCTCCCGTGGACTTCTGTGCCGCCCCGTCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR CCA 90 bp GGGACAGCATTCCTTGGGGAGCGCCGGGTCGGCGTGTCCAAAGAGCGGGGGCAACCGCTGCCACGGAGCTaGCGATCGGCCTGCATCTTC +
Preference number: 4 (lower is better)
Translates to: GTAFLGERRVGVSKERGQPLPRS*RSACIF
Trigger: GAAGATGCAGGCCGATCGCCAGCTCCGTGGCAGCGG...TTGCCCCCGCTCTTTGGACACGCCGACCCGGCGCTCCCCAAGGAATGCTGTCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR TCA 90 bp TGCACCCAAGAACAGGTGTGGACGGGGCGGCACAGAAGTCCACGGGAGGGGGCGCAGCGGGCATCCCTGTaGTGGGCACATAGCCAACGC +
Preference number: 4 (lower is better)
Translates to: CTQEQVWTGRHRSPREGAQRASL*WAHSQR
Trigger: GCGTTGGCTATGTGCCCATCACAGGGATGCCCGCTG...CGCCCCCTCCCGTGGACTTCTGTGCCGCCCCGTCCACACCTGTTCTTGGGTGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR TCA 90 bp TGCACCCAAGAACAGGTGTGGACGGGGCGGCACAGAAGTCCACGGGAGGGGGCGGACAGGAGAGCGCGCTaGGACCTCCCAGCACGAGAT +
Preference number: 4 (lower is better)
Translates to: CTQEQVWTGRHRSPREGADRRAR*DLPARD
Trigger: ATCTCGTGCTGGGAGGTCTCAGCGCGCTCTCCTGTC...CGCCCCCTCCCGTGGACTTCTGTGCCGCCCCGTCCACACCTGTTCTTGGGTGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR TCA 90 bp CGGCAAGCGTGGTCATCGGCAAAGGGTTGCTCTCCCTCCAGCGAGGCTGGCCCCTTTCCTCGCCCACGCTaGACCCACGTCCTGGGCACA +
Preference number: 4 (lower is better)
Translates to: RQAWSSAKGCSPSSEAGPFPRPR*THVLGT
Trigger: TGTGCCCAGGACGTGGGTTCAGCGTGGGCGAGGAAA...GGGGCCAGCCTCGCTGGAGGGAGAGCAACCCTTTGCCGATGACCACGCTTGCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR TCA 90 bp GGTGTGGACGGGGCGGCACAGAAGTCCACGGGAGGGGGCGACACGGGTGCTCTTGCAGTCAGAGGTAAGTaGGCGCCTCCCGCCTCAGAA +
Preference number: 4 (lower is better)
Translates to: GVDGAAQKSTGGGDTGALAVRGK*APPASE
Trigger: TTCTGAGGCGGGAGGCGCTCACTTACCTCTGACTGC...AAGAGCACCCGTGTCGCCCCCTCCCGTGGACTTCTGTGCCGCCCCGTCCACACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR TCA 90 bp GCCCGCTGGCTGGCAATCAGGCAGAGCCTGGCCAACCGTGCCAGGCCCCCTTCCTTTAGGACCCACAGCTaGAGAAGGCGCCTGCTGCCA +
Preference number: 4 (lower is better)
Translates to: ARWLAIRQSLANRARPPSFRTHS*RRRLLP
Trigger: TGGCAGCAGGCGCCTTCTTCAGCTGTGGGTCCTAAA...GGAAGGGGGCCTGGCACGGTTGGCCAGGCTCTGCCTGATTGCCAGCCAGCGGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR GCA 90 bp GTTCCCTCGCTGGGCTTCCAGCACGGAGCGGATCACCTCCTGGTCCATGTTGGGGCCCACGGTGCCCACTaGGCCTCCGTACTGCAGCTG +
Preference number: 4 (lower is better)
Translates to: VPSLGFQHGADHLLVHVGAHGAH*ASVLQL
Trigger: CAGCTGCAGTACGGAGGCGCAGTGGGCACCGTGGGC...CCCAACATGGACCAGGAGGTGATCCGCTCCGTGCTGGAAGCCCAGCGAGGGAAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527938.5
CDS-3UTR GCA 90 bp GGGAGGACACCCACGGAGCTGGCACGAGCGCAGCAGGAGAGACGGACGGCAGCCTGTGGGTCCAGGCAATaGGGTCGTCCATGGAGAAGG +
Preference number: 4 (lower is better)
Translates to: GRTPTELARAQQERRTAACGSRQ*GRPWRR
Trigger: CCTTCTCCATGGACGACCGCATTGCCTGGACCCACA...GGCTGCCGTCCGTCTCTCCTGCTGCGCTCGTGCCAGCTCCGTGGGTGTCCTCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR GCA 90 bp CGCACGTCCCAGGGACAGGAGAGCGCGCTGAGACCTCCCAGCACGAGATGGGAGTCCTCCACCTTGCCCTaGCTCAGGGACTCCGGGATG +
Preference number: 4 (lower is better)
Translates to: RTSQGQESALRPPSTRWESSTLP*LRDSGM
Trigger: CATCCCGGAGTCCCTGAGGCAGGGCAAGGTGGAGGA...CTCCCATCTCGTGCTGGGAGGTCTCAGCGCGCTCTCCTGTCCCTGGGACGTGCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR GCA 90 bp CCTCTCACCCCAGCCTCGCAAGGCCTGTTGAGAAGAGAAGCTCCCTGGGAGGACGGGCCACGGGCACCATaGCGGGGCTACAGACAGCGG +
Preference number: 4 (lower is better)
Translates to: PLTPASQGLLRREAPWEDGPRAP*RGYRQR
Trigger: CCGCTGTCTGTAGCCCCGGCATGGTGCCCGTGGCCC...GTCCTCCCAGGGAGCTTCTCTTCTCAACAGGCCTTGCGAGGCTGGGGTGAGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR GCA 90 bp GTCAGGCTGTCCTTAGTGACCGCTGCCACGGAGCTGGCGATCGGCCTGCATCTTGGGCCACGGGCACCATaGCGGGGCTACAGACAGCGG +
Preference number: 4 (lower is better)
Translates to: VRLSLVTAATELAIGLHLGPRAP*RGYRQR
Trigger: CCGCTGTCTGTAGCCCCGGCATGGTGCCCGTGGCCC...AAGATGCAGGCCGATCGCCAGCTCCGTGGCAGCGGTCACTAAGGACAGCCTGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR GCA 90 bp GTTGGGACAGCATTCCTTGGGGAGCGCCGGGTCGGCGTGTCCAAAGAGCGGGGGGGCTCCTCCCCCATCTaGAGCAGGGAGTTGATGGCG +
Preference number: 4 (lower is better)
Translates to: VGTAFLGERRVGVSKERGGSSPI*SRELMA
Trigger: CGCCATCAACTCCCTGCTGCAGATGGGGGAGGAGCC...CCCCCGCTCTTTGGACACGCCGACCCGGCGCTCCCCAAGGAATGCTGTCCCAAC
67% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
ENST00000530506.5
CDS-3UTR GCA 90 bp GGGACAGCATTCCTTGGGGAGCGCCGGGTCGGCGTGTCCAAAGAGCGGGGGCAAGGACCCGGCTTCAGATaGCCGCTGGCTGGCAATCAG +
Preference number: 4 (lower is better)
Translates to: GTAFLGERRVGVSKERGQGPGFR*PLAGNQ
Trigger: CTGATTGCCAGCCAGCGGGCATCTGAAGCCGGGTCC...TTGCCCCCGCTCTTTGGACACGCCGACCCGGCGCTCCCCAAGGAATGCTGTCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR GCA 90 bp GGTGTGGACGGGGCGGCACAGAAGTCCACGGGAGGGGGCGACACGGGTGCTCTTTCCTGTAGGCCAAGATaGTACACGCAGCGCCCAGGC +
Preference number: 4 (lower is better)
Translates to: GVDGAAQKSTGGGDTGALSCRPR*YTQRPG
Trigger: GCCTGGGCGCTGCGTGTAGCATCTTGGCCTACAGGA...AAGAGCACCCGTGTCGCCCCCTCCCGTGGACTTCTGTGCCGCCCCGTCCACACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR GCA 90 bp GTTGGGACAGCATTCCTTGGGGAGCGCCGGGTCGGCGTGTCCAAAGAGCGGGGGGAAGGCAGAAACCGGTaGTGGTGGCCACACCTGGGC +
Preference number: 4 (lower is better)
Translates to: VGTAFLGERRVGVSKERGEGRNR*WWPHLG
Trigger: GCCCAGGTGTGGCCACCAGCACCGGTTTCTGCCTTC...CCCCCGCTCTTTGGACACGCCGACCCGGCGCTCCCCAAGGAATGCTGTCCCAAC
67% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR GCA 90 bp TGCCCGCTGGCTGGCAATCAGGCAGAGCCTGGCCAACCGTGCCAGGCCCCCTTCGTGTGGCAGTCTCACTaGACCCCAGCAACGCGAAGG +
Preference number: 4 (lower is better)
Translates to: CPLAGNQAEPGQPCQAPFVWQSH*TPATRR
Trigger: CCTTCGCGTTGCTGGGGTGCAGTGAGACTGCCACAC...GAAGGGGGCCTGGCACGGTTGGCCAGGCTCTGCCTGATTGCCAGCCAGCGGGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR GCA 90 bp GCCCGCTGGCTGGCAATCAGGCAGAGCCTGGCCAACCGTGCCAGGCCCCCTTCCCCACAGAGCCACATGTaGACGCGTGTGGCAGTCTCA +
Preference number: 4 (lower is better)
Translates to: ARWLAIRQSLANRARPPSPQSHM*TRVAVS
Trigger: TGAGACTGCCACACGCGTGCACATGTGGCTCTGTGG...GGAAGGGGGCCTGGCACGGTTGGCCAGGCTCTGCCTGATTGCCAGCCAGCGGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR GCA 90 bp CCTCTCACCCCAGCCTCGCAAGGCCTGTTGAGAAGAGAAGCTCCCTGGGAGGACGGCCCCCACACGGGCTaGTCAAGGGCTGGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: PLTPASQGLLRREAPWEDGPHTG*SRAGSR
Trigger: CCTGCTGCCAGCCCTTGAGCAGCCCGTGTGGGGGCC...GTCCTCCCAGGGAGCTTCTCTTCTCAACAGGCCTTGCGAGGCTGGGGTGAGAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR GCA 90 bp TGGCACAGTCAGGCTGTCCTTAGTGACCGCTGCCACGGAGCTGGCGATCGGCCTTCCTGCCTGGCACCCTaGAGGGTAGCGCCCAGGGAG +
Preference number: 4 (lower is better)
Translates to: WHSQAVLSDRCHGAGDRPSCLAP*RVAPRE
Trigger: CTCCCTGGGCGCTACCCTGCAGGGTGCCAGGCAGGA...AGGCCGATCGCCAGCTCCGTGGCAGCGGTCACTAAGGACAGCCTGACTGTGCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR CCA 90 bp GGGAGCGCCGGGTCGGCGTGTCCAAAGAGCGGGGGCAAAACGGCATCGAGGCAGTCCAGCGGGGATTCTTaGCGCCATTGTGTGCCGTGG +
Preference number: 4 (lower is better)
Translates to: GSAGSACPKSGGKTASRQSSGDS*RHCVPW
Trigger: CCACGGCACACAATGGCGCCAAGAATCCCCGCTGGA...CTGCCTCGATGCCGTTTTGCCCCCGCTCTTTGGACACGCCGACCCGGCGCTCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000527886.5
ENST00000530506.5
CDS-3UTR CCA 90 bp GCGCAGCAGGAGAGACGGACGGCAGCCTCCGGCGGGCGAAGGACCCGGCTTCAGGGAACATGTCCTGGATaGCTTTCAGGTCCTCCTCGC +
Preference number: 4 (lower is better)
Translates to: AQQERRTAASGGRRTRLQGTCPG*LSGPPR
Trigger: GCGAGGAGGACCTGAAAGCCATCCAGGACATGTTCC...CTGAAGCCGGGTCCTTCGCCCGCCGGAGGCTGCCGTCCGTCTCTCCTGCTGCGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR CCA 90 bp GGAGCGCCGGGTCGGCGTGTCCAAAGAGCGGGGGCAAAACGGCATCGAGGCAGATCCTTGTTCCCTCGCTaGGCTTCCAGCACGGAGCGG +
Preference number: 4 (lower is better)
Translates to: GAPGRRVQRAGAKRHRGRSLFPR*ASSTER
Trigger: CCGCTCCGTGCTGGAAGCCCAGCGAGGGAACAAGGA...TCTGCCTCGATGCCGTTTTGCCCCCGCTCTTTGGACACGCCGACCCGGCGCTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
ENST00000530506.5
CDS-3UTR CCA 90 bp GGTGTGGACGGGGCGGCACAGAAGTCCACGGGAGGGGGCGACACGGGTGCTCTTGAGGCAGAGGCTCTATaGCTCCTCCCCCATCTGCAG +
Preference number: 4 (lower is better)
Translates to: GVDGAAQKSTGGGDTGALEAEAL*LLPHLQ
Trigger: CTGCAGATGGGGGAGGAGCCATAGAGCCTCTGCCTC...AAGAGCACCCGTGTCGCCCCCTCCCGTGGACTTCTGTGCCGCCCCGTCCACACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
ENST00000530506.5
CDS-3UTR CCA 90 bp TCTTTCACGGGAATCTTGTTGGGACAGCATTCCTTGGGGAGCGCCGGGTCGGCGCCTCCCAGCACGAGATaGGAGGGGAGCCCCCGCCCC +
Preference number: 4 (lower is better)
Translates to: SFTGILLGQHSLGSAGSAPPSTR*EGSPRP
Trigger: GGGGCGGGGGCTCCCCTCCCATCTCGTGCTGGGAGG...CGCCGACCCGGCGCTCCCCAAGGAATGCTGTCCCAACAAGATTCCCGTGAAAGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR CCA 90 bp CCACGGAGCTGGCACGAGCGCAGCAGGAGAGACGGACGGCAGCCTCCGGCGGGCTCCTCACTCCAGGTGTaGGTTCATTCTGCCTTCAGG +
Preference number: 4 (lower is better)
Translates to: PRSWHERSRRDGRQPPAGSSLQV*VHSAFR
Trigger: CCTGAAGGCAGAATGAACCCACACCTGGAGTGAGGA...GCCCGCCGGAGGCTGCCGTCCGTCTCTCCTGCTGCGCTCGTGCCAGCTCCGTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR CCA 90 bp GGAGCGCCGGGTCGGCGTGTCCAAAGAGCGGGGGCAAAACGGCATCGAGGCAGACAGATGCCCGCTGGCTaGCAATCAGGCAGAGCCTGG +
Preference number: 4 (lower is better)
Translates to: GAPGRRVQRAGAKRHRGRQMPAG*QSGRAW
Trigger: CCAGGCTCTGCCTGATTGCCAGCCAGCGGGCATCTG...TCTGCCTCGATGCCGTTTTGCCCCCGCTCTTTGGACACGCCGACCCGGCGCTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR CCA 90 bp TGCACCCAAGAACAGGTGTGGACGGGGCGGCACAGAAGTCCACGGGAGGGGGCGCAGATGCCCGCTGGCTaGCAATCAGGCAGAGCCTGG +
Preference number: 4 (lower is better)
Translates to: CTQEQVWTGRHRSPREGAQMPAG*QSGRAW
Trigger: CCAGGCTCTGCCTGATTGCCAGCCAGCGGGCATCTG...CGCCCCCTCCCGTGGACTTCTGTGCCGCCCCGTCCACACCTGTTCTTGGGTGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR CCA 90 bp AGCCCTGGGCAGGGGCCAGGCTCACAGCAAAGCGCGTTAGGGCAAGGGCGTGAGGCTGAACCCACGTCCTaGGCACAGCAGCTCCCAAGC +
Preference number: 4 (lower is better)
Translates to: SPGQGPGSQQSALGQGREAEPTS*AQQLPS
Trigger: GCTTGGGAGCTGCTGTGCCCAGGACGTGGGTTCAGC...CTCACGCCCTTGCCCTAACGCGCTTTGCTGTGAGCCTGGCCCCTGCCCAGGGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR CCA 90 bp GCCCGCTGGCTGGCAATCAGGCAGAGCCTGGCCAACCGTGCCAGGCCCCCTTCCAGATGGCGGCAAGCGTaGTCATCGGCAAAGGGTTGC +
Preference number: 4 (lower is better)
Translates to: ARWLAIRQSLANRARPPSRWRQA*SSAKGC
Trigger: GCAACCCTTTGCCGATGACCACGCTTGCCGCCATCT...GGAAGGGGGCCTGGCACGGTTGGCCAGGCTCTGCCTGATTGCCAGCCAGCGGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR CCA 90 bp GCCCGCTGGCTGGCAATCAGGCAGAGCCTGGCCAACCGTGCCAGGCCCCCTTCCCCTCCCCTTGTGAGCTaGCAGACAAGCCTGTCCTTC +
Preference number: 4 (lower is better)
Translates to: ARWLAIRQSLANRARPPSPPLVS*QTSLSF
Trigger: GAAGGACAGGCTTGTCTGCCAGCTCACAAGGGGAGG...GGAAGGGGGCCTGGCACGGTTGGCCAGGCTCTGCCTGATTGCCAGCCAGCGGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR CCA 90 bp GCGGCATCCTTGTTCCCTCGCTGGGCTTCCAGCACGGAGCGGATCACCTCCTGGCGGTGGGGCGTCAGGTaGACGAGTCCTCACAGGCTC +
Preference number: 4 (lower is better)
Translates to: AASLFPRWASSTERITSWRWGVR*TSPHRL
Trigger: GAGCCTGTGAGGACTCGTCCACCTGACGCCCCACCG...CCAGGAGGTGATCCGCTCCGTGCTGGAAGCCCAGCGAGGGAACAAGGATGCCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530506.5
CDS-3UTR TCA 90 bp GGGTACAGCCCCAACGCGTCAGTGTCAGCTTCATCTAGATGGCCGTACTGTGCCTCGCCGACCCGACAGTaGCGCGCCGGGCGACCTCCT +
Preference number: 4 (lower is better)
Translates to: GYSPNASVSASSRWPYCASPTRQ*RAGRPP
Trigger: AGGAGGTCGCCCGGCGCGTCACTGTCGGGTCGGCGA...GGCACAGTACGGCCATCTAGATGAAGCTGACACTGACGCGTTGGGGCTGTACCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530506.5
CDS-3UTR TCA 90 bp GGGACAGCATTCCTTGGGGAGCGCCGGGTCGGCGTGTCCAAAGAGCGGGGGCAAGCAGTCAGAGGTAAGTaGGCGCCTCCCGCCTCAGAA +
Preference number: 4 (lower is better)
Translates to: GTAFLGERRVGVSKERGQAVRGK*APPASE
Trigger: TTCTGAGGCGGGAGGCGCTCACTTACCTCTGACTGC...TTGCCCCCGCTCTTTGGACACGCCGACCCGGCGCTCCCCAAGGAATGCTGTCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR TCA 90 bp ATCCTTGTTCCCTCGCTGGGCTTCCAGCACGGAGCGGATCACCTCCTGGTCCATGCCCGCGCTGAGTGCTaGCGGTGGTCGCCATGGTGC +
Preference number: 4 (lower is better)
Translates to: ILVPSLGFQHGADHLLVHARAEC*RWSPWC
Trigger: GCACCATGGCGACCACCGTCAGCACTCAGCGCGGGC...ATGGACCAGGAGGTGATCCGCTCCGTGCTGGAAGCCCAGCGAGGGAACAAGGAT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527938.5
ENST00000530506.5
CDS-3UTR TCA 90 bp CCCACATGCACCCAAGAACAGGTGTGGACGGGGCGGCACAGAAGTCCACGGGAGGCTGCTGTGTGGGCGTaGTGCGGAGGAAGTCCTGCG +
Preference number: 4 (lower is better)
Translates to: PTCTQEQVWTGRHRSPREAAVWA*CGGSPA
Trigger: CGCAGGACTTCCTCCGCATCACGCCCACACAGCAGC...CTCCCGTGGACTTCTGTGCCGCCCCGTCCACACCTGTTCTTGGGTGCATGTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR TCA 90 bp TGCCCGCTGGCTGGCAATCAGGCAGAGCCTGGCCAACCGTGCCAGGCCCCCTTCTTTAGGACCCACAGCTaGAGAAGGCGCCTGCTGCCA +
Preference number: 4 (lower is better)
Translates to: CPLAGNQAEPGQPCQAPFFRTHS*RRRLLP
Trigger: TGGCAGCAGGCGCCTTCTTCAGCTGTGGGTCCTAAA...GAAGGGGGCCTGGCACGGTTGGCCAGGCTCTGCCTGATTGCCAGCCAGCGGGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR GCA 90 bp TGTTCCCTCGCTGGGCTTCCAGCACGGAGCGGATCACCTCCTGGTCCATGTTGGGCCCCCGCCGGAGCCTaGGACGGAGACAGTTGTCAC +
Preference number: 4 (lower is better)
Translates to: CSLAGLPARSGSPPGPCWAPAGA*DGDSCH
Trigger: GTGACAACTGTCTCCGTCGCAGGCTCCGGCGGGGGC...CCAACATGGACCAGGAGGTGATCCGCTCCGTGCTGGAAGCCCAGCGAGGGAACA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527938.5
CDS-3UTR GCA 90 bp TTCCCTCGCTGGGCTTCCAGCACGGAGCGGATCACCTCCTGGTCCATGTTGGGGTCAGTCGGCCCACGGTaGCCACTGCGCCTCCGTACT +
Preference number: 4 (lower is better)
Translates to: FPRWASSTERITSWSMLGSVGPR*PLRLRT
Trigger: AGTACGGAGGCGCAGTGGGCACCGTGGGCCGACTGA...CCCCAACATGGACCAGGAGGTGATCCGCTCCGTGCTGGAAGCCCAGCGAGGGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527938.5
CDS-3UTR GCA 90 bp AAGTCCACGGGAGGGGGCGACACGGGTGCTCTTTCACGGGAATCTTGTTGGGACGGGCCACGGGCACCATaGCGGGGCTACAGACAGCGG +
Preference number: 4 (lower is better)
Translates to: KSTGGGDTGALSRESCWDGPRAP*RGYRQR
Trigger: CCGCTGTCTGTAGCCCCGGCATGGTGCCCGTGGCCC...GTCCCAACAAGATTCCCGTGAAAGAGCACCCGTGTCGCCCCCTCCCGTGGACTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
ENST00000530506.5
CDS-3UTR GCA 90 bp TGCCCGCTGGCTGGCAATCAGGCAGAGCCTGGCCAACCGTGCCAGGCCCCCTTCAGGGGGCGACACGGGTaGTCTTTCACGGGAATCTTG +
Preference number: 4 (lower is better)
Translates to: CPLAGNQAEPGQPCQAPFRGRHG*SFTGIL
Trigger: CAAGATTCCCGTGAAAGAGCACCCGTGTCGCCCCCT...GAAGGGGGCCTGGCACGGTTGGCCAGGCTCTGCCTGATTGCCAGCCAGCGGGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR GCA 90 bp CCACGGAGCTGGCACGAGCGCAGCAGGAGAGACGGACGGCAGCCTCCGGCGGGCAACCGAAAACCCACATaGACCCAAGAACAGGTGTGG +
Preference number: 4 (lower is better)
Translates to: PRSWHERSRRDGRQPPAGNRKPT*TQEQVW
Trigger: CCACACCTGTTCTTGGGTGCATGTGGGTTTTCGGTT...GCCCGCCGGAGGCTGCCGTCCGTCTCTCCTGCTGCGCTCGTGCCAGCTCCGTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR GCA 90 bp GCCCGCTGGCTGGCAATCAGGCAGAGCCTGGCCAACCGTGCCAGGCCCCCTTCCGGTGTGGGTTCATTCTaGCTTCAGGCCGGAGTCTGT +
Preference number: 4 (lower is better)
Translates to: ARWLAIRQSLANRARPPSGVGSF*LQAGVC
Trigger: ACAGACTCCGGCCTGAAGGCAGAATGAACCCACACC...GGAAGGGGGCCTGGCACGGTTGGCCAGGCTCTGCCTGATTGCCAGCCAGCGGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR GCA 90 bp TGGCACAGTCAGGCTGTCCTTAGTGACCGCTGCCACGGAGCTGGCGATCGGCCTGAGCCTGGCCAACCGTaGCAGGCCCCCTTCCTCACT +
Preference number: 4 (lower is better)
Translates to: WHSQAVLSDRCHGAGDRPEPGQP*QAPFLT
Trigger: AGTGAGGAAGGGGGCCTGGCACGGTTGGCCAGGCTC...AGGCCGATCGCCAGCTCCGTGGCAGCGGTCACTAAGGACAGCCTGACTGTGCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR GCA 90 bp TGTTGGGACAGCATTCCTTGGGGAGCGCCGGGTCGGCGTGTCCAAAGAGCGGGGGCAGTCGGCTGGCAGTaGCACCACACCCTCTCGGAA +
Preference number: 4 (lower is better)
Translates to: CWDSIPWGAPGRRVQRAGAVGWQ*HHTLSE
Trigger: TTCCGAGAGGGTGTGGTGGCACTGCCAGCCGACTGC...CCCCGCTCTTTGGACACGCCGACCCGGCGCTCCCCAAGGAATGCTGTCCCAACA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR GCA 90 bp AGACCCAAGCCCTGGGCAGGGGCCAGGCTCACAGCAAAGCGCGTTAGGGCAAGGAGCTGGACCTGCCGCTaGTGCTGTGTGGGCGTGATG +
Preference number: 4 (lower is better)
Translates to: RPKPWAGARLTAKRVRARSWTCR*CCVGVM
Trigger: CATCACGCCCACACAGCAGCAGCGGCAGGTCCAGCT...CCTTGCCCTAACGCGCTTTGCTGTGAGCCTGGCCCCTGCCCAGGGCTTGGGTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR GCA 90 bp CCGCTGCCACGGAGCTGGCGATCGGCCTGCATCTTCAAACCCAGGAGCAGGAGCAGCTGGACCTGCCGCTaGTGCTGTGTGGGCGTGATG +
Preference number: 4 (lower is better)
Translates to: PLPRSWRSACIFKPRSRSSWTCR*CCVGVM
Trigger: CATCACGCCCACACAGCAGCAGCGGCAGGTCCAGCT...GCTCCTGCTCCTGGGTTTGAAGATGCAGGCCGATCGCCAGCTCCGTGGCAGCGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR GCA 90 bp CAGCAGGAGAGACGGACGGCAGCCTCCGGCGGGCGAAGGACCCGGCTTCAGATGAGCTGGCGATCGGCCTaGATCTTCAAACCCAGGAGC +
Preference number: 4 (lower is better)
Translates to: QQERRTAASGGRRTRLQMSWRSA*IFKPRS
Trigger: GCTCCTGGGTTTGAAGATGCAGGCCGATCGCCAGCT...CATCTGAAGCCGGGTCCTTCGCCCGCCGGAGGCTGCCGTCCGTCTCTCCTGCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR CCA 90 bp ACCCCAGCCTCGCAAGGCCTGTTGAGAAGAGAAGCTCCCTGGGAGGACACCCACGCCTGGGCGTCCAGCTaGACGGTGGTCGCCATGGTG +
Preference number: 4 (lower is better)
Translates to: TPASQGLLRREAPWEDTHAWASS*TVVAMV
Trigger: CACCATGGCGACCACCGTCCAGCTGGACGCCCAGGC...GTGGGTGTCCTCCCAGGGAGCTTCTCTTCTCAACAGGCCTTGCGAGGCTGGGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263646.11
CDS-3UTR CCA 90 bp GTTGGGACAGCATTCCTTGGGGAGCGCCGGGTCGGCGTGTCCAAAGAGCGGGGGGGGGGCACCGTGCAGTaGATGACCTTATTCCAGCGG +
Preference number: 4 (lower is better)
Translates to: VGTAFLGERRVGVSKERGGGTVQ*MTLFQR
Trigger: CCGCTGGAATAAGGTCATCCACTGCACGGTGCCCCC...CCCCCGCTCTTTGGACACGCCGACCCGGCGCTCCCCAAGGAATGCTGTCCCAAC
66% GC, longest homopolymer 10 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000527886.5
ENST00000530506.5
CDS-3UTR CCA 90 bp GCCCGCTGGCTGGCAATCAGGCAGAGCCTGGCCAACCGTGCCAGGCCCCCTTCCGGAACATGTCCTGGATaGCTTTCAGGTCCTCCTCGC +
Preference number: 4 (lower is better)
Translates to: ARWLAIRQSLANRARPPSGTCPG*LSGPPR
Trigger: GCGAGGAGGACCTGAAAGCCATCCAGGACATGTTCC...GGAAGGGGGCCTGGCACGGTTGGCCAGGCTCTGCCTGATTGCCAGCCAGCGGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR CCA 90 bp GGGAGCGCCGGGTCGGCGTGTCCAAAGAGCGGGGGCAAAACGGCATCGAGGCAGACCCAAGAACAGGTGTaGACGGGGCGGCACAGAAGT +
Preference number: 4 (lower is better)
Translates to: GSAGSACPKSGGKTASRQTQEQV*TGRHRS
Trigger: ACTTCTGTGCCGCCCCGTCCACACCTGTTCTTGGGT...CTGCCTCGATGCCGTTTTGCCCCCGCTCTTTGGACACGCCGACCCGGCGCTCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
ENST00000530506.5
CDS-3UTR CCA 90 bp AGGGCTGGCAGCAGGGGCCACGTCCTCTCTAGGAGACACCCACAGAGCCACATGACCAGACCCAAGCCCTaGGCAGGGGCCAGGCTCACA +
Preference number: 4 (lower is better)
Translates to: RAGSRGHVLSRRHPQSHMTRPKP*AGARLT
Trigger: TGTGAGCCTGGCCCCTGCCCAGGGCTTGGGTCTGGT...CATGTGGCTCTGTGGGTGTCTCCTAGAGAGGACGTGGCCCCTGCTGCCAGCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR CCA 90 bp TCCGGCGACCTGTCTTCTATCTCCGGAGCCCCGCCTGAGGCTCCAAGATGGCACACCAGACCCAAGCCCTaGGCAGGGGCCAGGCTCACA +
Preference number: 4 (lower is better)
Translates to: SGDLSSISGAPPEAPRWHTRPKP*AGARLT
Trigger: TGTGAGCCTGGCCCCTGCCCAGGGCTTGGGTCTGGT...GTGCCATCTTGGAGCCTCAGGCGGGGCTCCGGAGATAGAAGACAGGTCGCCGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR CCA 90 bp AGGGCTGGCAGCAGGGGCCACGTCCTCTCTAGGAGACACCCACAGAGCCACATGCAATCAGGCAGAGCCTaGCCAACCGTGCCAGGCCCC +
Preference number: 4 (lower is better)
Translates to: RAGSRGHVLSRRHPQSHMQSGRA*PTVPGP
Trigger: GGGGCCTGGCACGGTTGGCCAGGCTCTGCCTGATTG...CATGTGGCTCTGTGGGTGTCTCCTAGAGAGGACGTGGCCCCTGCTGCCAGCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR CCA 90 bp GCAGGGGCCACGTCCTCTCTAGGAGACACCCACAGAGCCACATGTGCACGCGTGGGACACCCACGGAGCTaGCACGAGCGCAGCAGGAGA +
Preference number: 4 (lower is better)
Translates to: AGATSSLGDTHRATCARVGHPRS*HERSRR
Trigger: TCTCCTGCTGCGCTCGTGCCAGCTCCGTGGGTGTCC...CACGCGTGCACATGTGGCTCTGTGGGTGTCTCCTAGAGAGGACGTGGCCCCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR CCA 90 bp CGGGTGCTCTTTCACGGGAATCTTGTTGGGACAGCATTCCTTGGGGAGCGCCGGAGCTGCTGGGCCGCCTaGGCGTCCAGCTGGACCTGC +
Preference number: 4 (lower is better)
Translates to: RVLFHGNLVGTAFLGERRSCWAA*ASSWTC
Trigger: GCAGGTCCAGCTGGACGCCCAGGCGGCCCAGCAGCT...CCGGCGCTCCCCAAGGAATGCTGTCCCAACAAGATTCCCGTGAAAGAGCACCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR CCA 90 bp TTGTTGGGACAGCATTCCTTGGGGAGCGCCGGGTCGGCGTGTCCAAAGAGCGGGAGAAACCGGTGCTGGTaGCCACACCTGGGCGCCTGG +
Preference number: 4 (lower is better)
Translates to: LLGQHSLGSAGSACPKSGRNRCW*PHLGAW
Trigger: CCAGGCGCCCAGGTGTGGCCACCAGCACCGGTTTCT...CCCGCTCTTTGGACACGCCGACCCGGCGCTCCCCAAGGAATGCTGTCCCAACAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR CCA 90 bp TGCCCGCTGGCTGGCAATCAGGCAGAGCCTGGCCAACCGTGCCAGGCCCCCTTCACATGTGCACGCGTGTaGCAGTCTCACTGCACCCCA +
Preference number: 4 (lower is better)
Translates to: CPLAGNQAEPGQPCQAPFTCARV*QSHCTP
Trigger: TGGGGTGCAGTGAGACTGCCACACGCGTGCACATGT...GAAGGGGGCCTGGCACGGTTGGCCAGGCTCTGCCTGATTGCCAGCCAGCGGGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR CCA 90 bp CTCTTTCACGGGAATCTTGTTGGGACAGCATTCCTTGGGGAGCGCCGGGTCGGCCTGGCCCCCACTGTGTaGGTCCCTCGGGCCCCCACA +
Preference number: 4 (lower is better)
Translates to: LFHGNLVGTAFLGERRVGLAPTV*VPRAPT
Trigger: TGTGGGGGCCCGAGGGACCCACACAGTGGGGGCCAG...GCCGACCCGGCGCTCCCCAAGGAATGCTGTCCCAACAAGATTCCCGTGAAAGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR CCA 90 bp ACCCCAGCCTCGCAAGGCCTGTTGAGAAGAGAAGCTCCCTGGGAGGACACCCACTCCCTCCAGCGAGGCTaGCCCCCACTGTGTGGGTCC +
Preference number: 4 (lower is better)
Translates to: TPASQGLLRREAPWEDTHSLQRG*PPLCGS
Trigger: GGACCCACACAGTGGGGGCCAGCCTCGCTGGAGGGA...GTGGGTGTCCTCCCAGGGAGCTTCTCTTCTCAACAGGCCTTGCGAGGCTGGGGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR CCA 90 bp ACCCACATGCACCCAAGAACAGGTGTGGACGGGGCGGCACAGAAGTCCACGGGATCCCTCCAGCGAGGCTaGCCCCCACTGTGTGGGTCC +
Preference number: 4 (lower is better)
Translates to: THMHPRTGVDGAAQKSTGSLQRG*PPLCGS
Trigger: GGACCCACACAGTGGGGGCCAGCCTCGCTGGAGGGA...TCCCGTGGACTTCTGTGCCGCCCCGTCCACACCTGTTCTTGGGTGCATGTGGGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR CCA 90 bp GACCGCCAGGAACCGAAAACCCACATGCACCCAAGAACAGGTGTGGACGGGGCGTCCCTCCAGCGAGGCTaGCCCCCACTGTGTGGGTCC +
Preference number: 4 (lower is better)
Translates to: DRQEPKTHMHPRTGVDGASLQRG*PPLCGS
Trigger: GGACCCACACAGTGGGGGCCAGCCTCGCTGGAGGGA...CGCCCCGTCCACACCTGTTCTTGGGTGCATGTGGGTTTTCGGTTCCTGGCGGTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR CCA 90 bp CCCAACGCGTCAGTGTCAGCTTCATCTAGATGGCCGTACTGTGCCAGGGACGCCACGCATGCCTGGGCATaGGGGCTGGGGGCTCCGGTG +
Preference number: 4 (lower is better)
Translates to: PNASVSASSRWPYCARDATHAWA*GLGAPV
Trigger: CACCGGAGCCCCCAGCCCCCATGCCCAGGCATGCGT...GGCGTCCCTGGCACAGTACGGCCATCTAGATGAAGCTGACACTGACGCGTTGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000530506.5
CDS-3UTR CCA 90 bp CCACATGCACCCAAGAACAGGTGTGGACGGGGCGGCACAGAAGTCCACGGGAGGCCAGTGACCCCGGCCTaGATGCTGCGGACTCAGACG +
Preference number: 4 (lower is better)
Translates to: PHAPKNRCGRGGTEVHGRPVTPA*MLRTQT
Trigger: CGTCTGAGTCCGCAGCATCCAGGCCGGGGTCACTGG...CCTCCCGTGGACTTCTGTGCCGCCCCGTCCACACCTGTTCTTGGGTGCATGTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530506.5
3UTR CAA 72 bp AGGGGGCGACACGGGTGCTCTTTCACGGGAATCTTGTaGGGACAGCATTCCTTGGGGAGCGCCGGGTCGGCG +
Preference number: 4 (lower is better)
Translates to: RGRHGCSFTGIL*GQHSLGSAGSA
Trigger: CGCCGACCCGGCGCTCCCCAAGGAATGCTGTCCCAACAAGATTCCCGTGAAAGAGCACCCGTGTCGCCCCCT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
ENST00000530506.5
3UTR CAA 72 bp GGGAGGGGGCGACACGGGTGCTCTTTCACGGGAATCTaGTTGGGACAGCATTCCTTGGGGAGCGCCGGGTCG +
Preference number: 4 (lower is better)
Translates to: GRGRHGCSFTGI*LGQHSLGSAGS
Trigger: CGACCCGGCGCTCCCCAAGGAATGCTGTCCCAACAAGATTCCCGTGAAAGAGCACCCGTGTCGCCCCCTCCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
ENST00000530506.5
CDS-3UTR TCA 90 bp GCGACACGGGTGCTCTTTCACGGGAATCTTGTTGGGACAGCATTCCTTGGGGAGTCGCCGACCCGACAGTaGCGCGCCGGGCGACCTCCT +
Preference number: 4 (lower is better)
Translates to: ATRVLFHGNLVGTAFLGESPTRQ*RAGRPP
Trigger: AGGAGGTCGCCCGGCGCGTCACTGTCGGGTCGGCGA...CTCCCCAAGGAATGCTGTCCCAACAAGATTCCCGTGAAAGAGCACCCGTGTCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000530506.5
CDS-3UTR TCA 90 bp GGGACAGCATTCCTTGGGGAGCGCCGGGTCGGCGTGTCCAAAGAGCGGGGGCAAGCACCGTGCAGTGGATaGCCTTATTCCAGCGGGGAT +
Preference number: 4 (lower is better)
Translates to: GTAFLGERRVGVSKERGQAPCSG*PYSSGD
Trigger: ATCCCCGCTGGAATAAGGTCATCCACTGCACGGTGC...TTGCCCCCGCTCTTTGGACACGCCGACCCGGCGCTCCCCAAGGAATGCTGTCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000527886.5
ENST00000530506.5
CDS-3UTR TCA 90 bp CGGCAAGCGTGGTCATCGGCAAAGGGTTGCTCTCCCTCCAGCGAGGCTGGCCCCGCACCGTGCAGTGGATaGCCTTATTCCAGCGGGGAT +
Preference number: 4 (lower is better)
Translates to: RQAWSSAKGCSPSSEAGPAPCSG*PYSSGD
Trigger: ATCCCCGCTGGAATAAGGTCATCCACTGCACGGTGC...GGGGCCAGCCTCGCTGGAGGGAGAGCAACCCTTTGCCGATGACCACGCTTGCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317204.11
ENST00000527886.5
CDS-3UTR TCA 90 bp ACAGCAGCTCCCAAGCTGTCAGCAGTCGGCTGGCAGTGCCACCACACCCTCTCGGGGACTCCGGGATGGTaGTGTGGGTCCAGGCAATGC +
Preference number: 4 (lower is better)
Translates to: TAAPKLSAVGWQCHHTLSGTPGW*CGSRQC
Trigger: GCATTGCCTGGACCCACATCACCATCCCGGAGTCCC...CGAGAGGGTGTGGTGGCACTGCCAGCCGACTGCTGACAGCTTGGGAGCTGCTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR TCA 90 bp CCCACATGCACCCAAGAACAGGTGTGGACGGGGCGGCACAGAAGTCCACGGGAGGGGACTCCGGGATGGTaGTGTGGGTCCAGGCAATGC +
Preference number: 4 (lower is better)
Translates to: PTCTQEQVWTGRHRSPREGTPGW*CGSRQC
Trigger: GCATTGCCTGGACCCACATCACCATCCCGGAGTCCC...CTCCCGTGGACTTCTGTGCCGCCCCGTCCACACCTGTTCTTGGGTGCATGTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
ENST00000530506.5
CDS-3UTR TCA 90 bp GGGTACAGCCCCAACGCGTCAGTGTCAGCTTCATCTAGATGGCCGTACTGTGCCGCCCGCGCTGAGTGCTaGCGGTGGTCGCCATGGTGC +
Preference number: 4 (lower is better)
Translates to: GYSPNASVSASSRWPYCAARAEC*RWSPWC
Trigger: GCACCATGGCGACCACCGTCAGCACTCAGCGCGGGC...GGCACAGTACGGCCATCTAGATGAAGCTGACACTGACGCGTTGGGGCTGTACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530506.5
CDS-3UTR TCA 90 bp CCGCTGCCACGGAGCTGGCGATCGGCCTGCATCTTCAAACCCAGGAGCAGGAGCTGCAGCCTCCCCTTGTaGGCTGGCAGACAAGCCTGT +
Preference number: 4 (lower is better)
Translates to: PLPRSWRSACIFKPRSRSCSLPL*AGRQAC
Trigger: ACAGGCTTGTCTGCCAGCTCACAAGGGGAGGCTGCA...GCTCCTGCTCCTGGGTTTGAAGATGCAGGCCGATCGCCAGCTCCGTGGCAGCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR TCA 90 bp ATGTTGGGGAACATGTCCTGGATGGCTTTCAGGTCCTCCTCGCTACAGCGGGGCTTTGCCGGCCCGCGCTaGGTGCTGACGGTGGTCGCC +
Preference number: 4 (lower is better)
Translates to: MLGNMSWMAFRSSSLQRGFAGPR*VLTVVA
Trigger: GGCGACCACCGTCAGCACTCAGCGCGGGCCGGCAAA...GCCCCGCTGTAGCGAGGAGGACCTGAAAGCCATCCAGGACATGTTCCCCAACAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530506.5
CDS-3UTR GCA 90 bp ACCTCTCACCCCAGCCTCGCAAGGCCTGTTGAGAAGAGAAGCTCCCTGGGAGGAGCCCCCGCCGGAGCCTaGGACGGAGACAGTTGTCAC +
Preference number: 4 (lower is better)
Translates to: TSHPSLARPVEKRSSLGGAPAGA*DGDSCH
Trigger: GTGACAACTGTCTCCGTCGCAGGCTCCGGCGGGGGC...TCCTCCCAGGGAGCTTCTCTTCTCAACAGGCCTTGCGAGGCTGGGGTGAGAGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
CDS-3UTR GCA 90 bp AAGTCCACGGGAGGGGGCGACACGGGTGCTCTTTCACGGGAATCTTGTTGGGACGCCCACGGTGCCCACTaGGCCTCCGTACTGCAGCTG +
Preference number: 4 (lower is better)
Translates to: KSTGGGDTGALSRESCWDAHGAH*ASVLQL
Trigger: CAGCTGCAGTACGGAGGCGCAGTGGGCACCGTGGGC...GTCCCAACAAGATTCCCGTGAAAGAGCACCCGTGTCGCCCCCTCCCGTGGACTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR GCA 90 bp CCTCTCACCCCAGCCTCGCAAGGCCTGTTGAGAAGAGAAGCTCCCTGGGAGGACTCAGTCGGCCCACGGTaGCCACTGCGCCTCCGTACT +
Preference number: 4 (lower is better)
Translates to: PLTPASQGLLRREAPWEDSVGPR*PLRLRT
Trigger: AGTACGGAGGCGCAGTGGGCACCGTGGGCCGACTGA...GTCCTCCCAGGGAGCTTCTCTTCTCAACAGGCCTTGCGAGGCTGGGGTGAGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR GCA 90 bp GCCTCGCAAGGCCTGTTGAGAAGAGAAGCTCCCTGGGAGGACACCCACGGAGCTTCAGTCGGCCCACGGTaGCCACTGCGCCTCCGTACT +
Preference number: 4 (lower is better)
Translates to: ASQGLLRREAPWEDTHGASVGPR*PLRLRT
Trigger: AGTACGGAGGCGCAGTGGGCACCGTGGGCCGACTGA...AGCTCCGTGGGTGTCCTCCCAGGGAGCTTCTCTTCTCAACAGGCCTTGCGAGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR GCA 90 bp GGACAGCATTCCTTGGGGAGCGCCGGGTCGGCGTGTCCAAAGAGCGGGGGCAAAACTTGTCCTCCACCTTaGCCTGCCTCAGGGACTCCG +
Preference number: 4 (lower is better)
Translates to: GQHSLGSAGSACPKSGGKTCPPP*PASGTP
Trigger: CGGAGTCCCTGAGGCAGGGCAAGGTGGAGGACAAGT...TTTGCCCCCGCTCTTTGGACACGCCGACCCGGCGCTCCCCAAGGAATGCTGTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
ENST00000530506.5
CDS-3UTR GCA 90 bp ACAGCAGCTCCCAAGCTGTCAGCAGTCGGCTGGCAGTGCCACCACACCCTCTCGTCCTTGTCGTCCCCCTaGCTCCCGCTCAGGCTGTAC +
Preference number: 4 (lower is better)
Translates to: TAAPKLSAVGWQCHHTLSSLSSP*LPLRLY
Trigger: GTACAGCCTGAGCGGGAGGCAGGGGGACGACAAGGA...CGAGAGGGTGTGGTGGCACTGCCAGCCGACTGCTGACAGCTTGGGAGCTGCTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR GCA 90 bp TTCCCTCGCTGGGCTTCCAGCACGGAGCGGATCACCTCCTGGTCCATGTTGGGGTCCTTGTCGTCCCCCTaGCTCCCGCTCAGGCTGTAC +
Preference number: 4 (lower is better)
Translates to: FPRWASSTERITSWSMLGSLSSP*LPLRLY
Trigger: GTACAGCCTGAGCGGGAGGCAGGGGGACGACAAGGA...CCCCAACATGGACCAGGAGGTGATCCGCTCCGTGCTGGAAGCCCAGCGAGGGAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000530506.5
CDS-3UTR GCA 90 bp AGGGCTGGCAGCAGGGGCCACGTCCTCTCTAGGAGACACCCACAGAGCCACATGGGACCCGGCTTCAGATaGCCGCTGGCTGGCAATCAG +
Preference number: 4 (lower is better)
Translates to: RAGSRGHVLSRRHPQSHMGPGFR*PLAGNQ
Trigger: CTGATTGCCAGCCAGCGGGCATCTGAAGCCGGGTCC...CATGTGGCTCTGTGGGTGTCTCCTAGAGAGGACGTGGCCCCTGCTGCCAGCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR GCA 90 bp GCGCAGCAGGAGAGACGGACGGCAGCCTCCGGCGGGCGAAGGACCCGGCTTCAGCGGAATCATGCACAGTaGTGCCTCTATCACCTCTCA +
Preference number: 4 (lower is better)
Translates to: AQQERRTAASGGRRTRLQRNHAQ*CLYHLS
Trigger: TGAGAGGTGATAGAGGCAGCACTGTGCATGATTCCG...CTGAAGCCGGGTCCTTCGCCCGCCGGAGGCTGCCGTCCGTCTCTCCTGCTGCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR GCA 90 bp GGAGCGCCGGGTCGGCGTGTCCAAAGAGCGGGGGCAAAACGGCATCGAGGCAGATCATCGGCAAAGGGTTaGTCTCCCTCCAGCGAGGCT +
Preference number: 4 (lower is better)
Translates to: GAPGRRVQRAGAKRHRGRSSAKG*SPSSEA
Trigger: AGCCTCGCTGGAGGGAGAGCAACCCTTTGCCGATGA...TCTGCCTCGATGCCGTTTTGCCCCCGCTCTTTGGACACGCCGACCCGGCGCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR CCA 90 bp GAACCGAAAACCCACATGCACCCAAGAACAGGTGTGGACGGGGCGGCACAGAAGCCGTACTGCAGCTGCTaGGCCGCCTGGGCGTCCAGC +
Preference number: 4 (lower is better)
Translates to: EPKTHMHPRTGVDGAAQKPYCSC*AAWASS
Trigger: GCTGGACGCCCAGGCGGCCCAGCAGCTGCAGTACGG...CTTCTGTGCCGCCCCGTCCACACCTGTTCTTGGGTGCATGTGGGTTTTCGGTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR CCA 90 bp CCCACATGCACCCAAGAACAGGTGTGGACGGGGCGGCACAGAAGTCCACGGGAGCGCCATTGTGTGCCGTaGGCGTCTCGTACACCGCGT +
Preference number: 4 (lower is better)
Translates to: PTCTQEQVWTGRHRSPRERHCVP*ASRTPR
Trigger: ACGCGGTGTACGAGACGCCCACGGCACACAATGGCG...CTCCCGTGGACTTCTGTGCCGCCCCGTCCACACCTGTTCTTGGGTGCATGTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000527886.5
ENST00000530506.5
CDS-3UTR CCA 90 bp CCACATGCACCCAAGAACAGGTGTGGACGGGGCGGCACAGAAGTCCACGGGAGGCGCCATTGTGTGCCGTaGGCGTCTCGTACACCGCGT +
Preference number: 4 (lower is better)
Translates to: PHAPKNRCGRGGTEVHGRRHCVP*ASRTPR
Trigger: ACGCGGTGTACGAGACGCCCACGGCACACAATGGCG...CCTCCCGTGGACTTCTGTGCCGCCCCGTCCACACCTGTTCTTGGGTGCATGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000527886.5
ENST00000530506.5
CDS-3UTR CCA 90 bp GTTGGGACAGCATTCCTTGGGGAGCGCCGGGTCGGCGTGTCCAAAGAGCGGGGGCTGCTGGTACACTGTTaGCATCAGGACCACGGGCTG +
Preference number: 4 (lower is better)
Translates to: VGTAFLGERRVGVSKERGLLVHC*HQDHGL
Trigger: CAGCCCGTGGTCCTGATGCCAACAGTGTACCAGCAG...CCCCCGCTCTTTGGACACGCCGACCCGGCGCTCCCCAAGGAATGCTGTCCCAAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
ENST00000530506.5
CDS-3UTR CCA 90 bp GGTGTGGACGGGGCGGCACAGAAGTCCACGGGAGGGGGCGACACGGGTGCTCTTGAGCGGATCACCTCCTaGTCCATGTTGGGGAACATG +
Preference number: 4 (lower is better)
Translates to: GVDGAAQKSTGGGDTGALERITS*SMLGNM
Trigger: CATGTTCCCCAACATGGACCAGGAGGTGATCCGCTC...AAGAGCACCCGTGTCGCCCCCTCCCGTGGACTTCTGTGCCGCCCCGTCCACACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
ENST00000530506.5
CDS-3UTR CCA 90 bp TGGCACAGTCAGGCTGTCCTTAGTGACCGCTGCCACGGAGCTGGCGATCGGCCTTCCTTGTTCCCTCGCTaGGCTTCCAGCACGGAGCGG +
Preference number: 4 (lower is better)
Translates to: WHSQAVLSDRCHGAGDRPSLFPR*ASSTER
Trigger: CCGCTCCGTGCTGGAAGCCCAGCGAGGGAACAAGGA...AGGCCGATCGCCAGCTCCGTGGCAGCGGTCACTAAGGACAGCCTGACTGTGCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR CCA 90 bp TTCCCTCGCTGGGCTTCCAGCACGGAGCGGATCACCTCCTGGTCCATGTTGGGGTCCTTGTTCCCTCGCTaGGCTTCCAGCACGGAGCGG +
Preference number: 4 (lower is better)
Translates to: FPRWASSTERITSWSMLGSLFPR*ASSTER
Trigger: CCGCTCCGTGCTGGAAGCCCAGCGAGGGAACAAGGA...CCCCAACATGGACCAGGAGGTGATCCGCTCCGTGCTGGAAGCCCAGCGAGGGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527938.5
ENST00000530506.5
CDS-3UTR CCA 90 bp CAGGGAGTTGATGGCGGCATCCTTGTTCCCTCGCTGGGCTTCCAGCACGGAGCGTCCTTGTTCCCTCGCTaGGCTTCCAGCACGGAGCGG +
Preference number: 4 (lower is better)
Translates to: QGVDGGILVPSLGFQHGASLFPR*ASSTER
Trigger: CCGCTCCGTGCTGGAAGCCCAGCGAGGGAACAAGGA...CGCTCCGTGCTGGAAGCCCAGCGAGGGAACAAGGATGCCGCCATCAACTCCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527938.5
ENST00000530506.5
CDS-3UTR CCA 90 bp TCCCCCATCTGCAGCAGGGAGTTGATGGCGGCATCCTTGTTCCCTCGCTGGGCTTGGGACAGCATTCCTTaGGGAGCGCCGGGTCGGCGT +
Preference number: 4 (lower is better)
Translates to: SPICSRELMAASLFPRWAWDSIP*GAPGRR
Trigger: ACGCCGACCCGGCGCTCCCCAAGGAATGCTGTCCCA...AGCCCAGCGAGGGAACAAGGATGCCGCCATCAACTCCCTGCTGCAGATGGGGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000530506.5
CDS-3UTR CCA 90 bp CGGGAATCTTGTTGGGACAGCATTCCTTGGGGAGCGCCGGGTCGGCGTGTCCAAAGGCTGGCTGGACAGTaGCCAGGTGAGCCAGGCCAG +
Preference number: 4 (lower is better)
Translates to: RESCWDSIPWGAPGRRVQRLAGQ*PGEPGQ
Trigger: CTGGCCTGGCTCACCTGGCCACTGTCCAGCCAGCCT...TTGGACACGCCGACCCGGCGCTCCCCAAGGAATGCTGTCCCAACAAGATTCCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR CCA 90 bp TGTTGGGACAGCATTCCTTGGGGAGCGCCGGGTCGGCGTGTCCAAAGAGCGGGGGCTTCAGATGCCCGCTaGCTGGCAATCAGGCAGAGC +
Preference number: 4 (lower is better)
Translates to: CWDSIPWGAPGRRVQRAGASDAR*LAIRQS
Trigger: GCTCTGCCTGATTGCCAGCCAGCGGGCATCTGAAGC...CCCCGCTCTTTGGACACGCCGACCCGGCGCTCCCCAAGGAATGCTGTCCCAACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR CCA 90 bp CGGGAATCTTGTTGGGACAGCATTCCTTGGGGAGCGCCGGGTCGGCGTGTCCAAGGACACCCACGGAGCTaGCACGAGCGCAGCAGGAGA +
Preference number: 4 (lower is better)
Translates to: RESCWDSIPWGAPGRRVQGHPRS*HERSRR
Trigger: TCTCCTGCTGCGCTCGTGCCAGCTCCGTGGGTGTCC...TTGGACACGCCGACCCGGCGCTCCCCAAGGAATGCTGTCCCAACAAGATTCCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR CCA 90 bp AGCCCTGGGCAGGGGCCAGGCTCACAGCAAAGCGCGTTAGGGCAAGGGCGTGAGAGAAGAGAAGCTCCCTaGGAGGACACCCACGGAGCT +
Preference number: 4 (lower is better)
Translates to: SPGQGPGSQQSALGQGRERREAP*EDTHGA
Trigger: AGCTCCGTGGGTGTCCTCCCAGGGAGCTTCTCTTCT...CTCACGCCCTTGCCCTAACGCGCTTTGCTGTGAGCCTGGCCCCTGCCCAGGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR CCA 90 bp GCGCAGCAGGAGAGACGGACGGCAGCCTCCGGCGGGCGAAGGACCCGGCTTCAGCAGAAGACCCACTTGTaGGCATTCTCTTTCTGTCCG +
Preference number: 4 (lower is better)
Translates to: AQQERRTAASGGRRTRLQQKTHL*AFSFCP
Trigger: CGGACAGAAAGAGAATGCCCACAAGTGGGTCTTCTG...CTGAAGCCGGGTCCTTCGCCCGCCGGAGGCTGCCGTCCGTCTCTCCTGCTGCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR CCA 90 bp CCGCTGCCACGGAGCTGGCGATCGGCCTGCATCTTCAAACCCAGGAGCAGGAGCGCCCCTCCGTCTGAGTaGTCGGCGTCTGCTGAACAA +
Preference number: 4 (lower is better)
Translates to: PLPRSWRSACIFKPRSRSAPPSE*SASAEQ
Trigger: TTGTTCAGCAGACGCCGACCACTCAGACGGAGGGGC...GCTCCTGCTCCTGGGTTTGAAGATGCAGGCCGATCGCCAGCTCCGTGGCAGCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR CCA 90 bp TCTTTCACGGGAATCTTGTTGGGACAGCATTCCTTGGGGAGCGCCGGGTCGGCGCCACACCTGGGCGCCTaGACACCGAAGCCCCCAGCA +
Preference number: 4 (lower is better)
Translates to: SFTGILLGQHSLGSAGSAPHLGA*TPKPPA
Trigger: TGCTGGGGGCTTCGGTGTCCAGGCGCCCAGGTGTGG...CGCCGACCCGGCGCTCCCCAAGGAATGCTGTCCCAACAAGATTCCCGTGAAAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR CCA 90 bp AAACCCACATGCACCCAAGAACAGGTGTGGACGGGGCGGCACAGAAGTCCACGGGCTGGTGGCCACACCTaGGCGCCTGGACACCGAAGC +
Preference number: 4 (lower is better)
Translates to: KPTCTQEQVWTGRHRSPRAGGHT*APGHRS
Trigger: GCTTCGGTGTCCAGGCGCCCAGGTGTGGCCACCAGC...CCGTGGACTTCTGTGCCGCCCCGTCCACACCTGTTCTTGGGTGCATGTGGGTTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR CCA 90 bp AAAACCCACATGCACCCAAGAACAGGTGTGGACGGGGCGGCACAGAAGTCCACGCTGGCCCCCACTGTGTaGGTCCCTCGGGCCCCCACA +
Preference number: 4 (lower is better)
Translates to: KTHMHPRTGVDGAAQKSTLAPTV*VPRAPT
Trigger: TGTGGGGGCCCGAGGGACCCACACAGTGGGGGCCAG...CGTGGACTTCTGTGCCGCCCCGTCCACACCTGTTCTTGGGTGCATGTGGGTTTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR CCA 90 bp GTTGGGACAGCATTCCTTGGGGAGCGCCGGGTCGGCGTGTCCAAAGAGCGGGGGAGATGGCGGCAAGCGTaGTCATCGGCAAAGGGTTGC +
Preference number: 4 (lower is better)
Translates to: VGTAFLGERRVGVSKERGRWRQA*SSAKGC
Trigger: GCAACCCTTTGCCGATGACCACGCTTGCCGCCATCT...CCCCCGCTCTTTGGACACGCCGACCCGGCGCTCCCCAAGGAATGCTGTCCCAAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
3UTR CAA 72 bp TCCCCCATCTGCAGCAGGGAGTTGATGGCGGCATCCTaGTTCCCTCGCTGGGCTTCCAGCACGGAGCGGATC +
Preference number: 4 (lower is better)
Translates to: SPICSRELMAAS*FPRWASSTERI
Trigger: GATCCGCTCCGTGCTGGAAGCCCAGCGAGGGAACAAGGATGCCGCCATCAACTCCCTGCTGCAGATGGGGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000527938.5
ENST00000530506.5
CDS-3UTR TCA 90 bp GTCCGTTATCAGTGGGTTTACATCCGAAGGCCGGCGGCAAGACACTTGAACCACTCGCCGACCCGACAGTaGCGCGCCGGGCGACCTCCT +
Preference number: 4 (lower is better)
Translates to: VRYQWVYIRRPAARHLNHSPTRQ*RAGRPP
Trigger: AGGAGGTCGCCCGGCGCGTCACTGTCGGGTCGGCGA...GTGGTTCAAGTGTCTTGCCGCCGGCCTTCGGATGTAAACCCACTGATAACGGAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
CDS-3UTR TCA 90 bp CCACATGCACCCAAGAACAGGTGTGGACGGGGCGGCACAGAAGTCCACGGGAGGTTGCCTGTACCACCGTaGTGTTCAGTCGGCCCACGG +
Preference number: 4 (lower is better)
Translates to: PHAPKNRCGRGGTEVHGRLPVPP*CSVGPR
Trigger: CCGTGGGCCGACTGAACATCACGGTGGTACAGGCAA...CCTCCCGTGGACTTCTGTGCCGCCCCGTCCACACCTGTTCTTGGGTGCATGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000527886.5
CDS-3UTR TCA 90 bp CGGGAATCTTGTTGGGACAGCATTCCTTGGGGAGCGCCGGGTCGGCGTGTCCAACAGCGGGCATCCCTGTaGTGGGCACATAGCCAACGC +
Preference number: 4 (lower is better)
Translates to: RESCWDSIPWGAPGRRVQQRASL*WAHSQR
Trigger: GCGTTGGCTATGTGCCCATCACAGGGATGCCCGCTG...TTGGACACGCCGACCCGGCGCTCCCCAAGGAATGCTGTCCCAACAAGATTCCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR TCA 90 bp CCCCGCCTGAGGCTCCAAGATGGCACAGTCAGGCTGTCCTTAGTGACCGCTGCCCAGAAGCGCACGTTCTaGGACCACTCCTGCCTGGCA +
Preference number: 4 (lower is better)
Translates to: PRLRLQDGTVRLSLVTAAQKRTF*DHSCLA
Trigger: TGCCAGGCAGGAGTGGTCTCAGAACGTGCGCTTCTG...GGCAGCGGTCACTAAGGACAGCCTGACTGTGCCATCTTGGAGCCTCAGGCGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR GCA 90 bp CAAGAGCATTTTCCAGAACGGCATGAGAAGGAGAGACGCACGTCCCAGGGACAGTGGTCGCCATGGTGCTaGGGCGGCCCCCGTGGCTCG +
Preference number: 4 (lower is better)
Translates to: QEHFPERHEKERRTSQGQWSPWC*GGPRGS
Trigger: CGAGCCACGGGGGCCGCCGCAGCACCATGGCGACCA...CTGTCCCTGGGACGTGCGTCTCTCCTTCTCATGCCGTTCTGGAAAATGCTCTTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
CDS-3UTR GCA 90 bp GAAAACCCACATGCACCCAAGAACAGGTGTGGACGGGGCGGCACAGAAGTCCACGCCCACGGTGCCCACTaGGCCTCCGTACTGCAGCTG +
Preference number: 4 (lower is better)
Translates to: ENPHAPKNRCGRGGTEVHAHGAH*ASVLQL
Trigger: CAGCTGCAGTACGGAGGCGCAGTGGGCACCGTGGGC...GTGGACTTCTGTGCCGCCCCGTCCACACCTGTTCTTGGGTGCATGTGGGTTTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR GCA 90 bp TTGTTGGGACAGCATTCCTTGGGGAGCGCCGGGTCGGCGTGTCCAAAGAGCGGGCTTGGCGCCATTGTGTaGCGTGGGCGTCTCGTACAC +
Preference number: 4 (lower is better)
Translates to: LLGQHSLGSAGSACPKSGLGAIV*RGRLVH
Trigger: GTGTACGAGACGCCCACGGCACACAATGGCGCCAAG...CCCGCTCTTTGGACACGCCGACCCGGCGCTCCCCAAGGAATGCTGTCCCAACAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000527886.5
ENST00000530506.5
CDS-3UTR GCA 90 bp TCCAAAGAGCGGGGGCAAAACGGCATCGAGGCAGAGGCTCTATGGCTCCTCCCCTCCTCCACCTTGCCCTaGCTCAGGGACTCCGGGATG +
Preference number: 4 (lower is better)
Translates to: SKERGQNGIEAEALWLLPSSTLP*LRDSGM
Trigger: CATCCCGGAGTCCCTGAGGCAGGGCAAGGTGGAGGA...GGGGAGGAGCCATAGAGCCTCTGCCTCGATGCCGTTTTGCCCCCGCTCTTTGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000530506.5
CDS-3UTR GCA 90 bp GACCGCCAGGAACCGAAAACCCACATGCACCCAAGAACAGGTGTGGACGGGGCGGGCTCCTCCCCCATCTaGAGCAGGGAGTTGATGGCG +
Preference number: 4 (lower is better)
Translates to: DRQEPKTHMHPRTGVDGAGSSPI*SRELMA
Trigger: CGCCATCAACTCCCTGCTGCAGATGGGGGAGGAGCC...CGCCCCGTCCACACCTGTTCTTGGGTGCATGTGGGTTTTCGGTTCCTGGCGGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
ENST00000530506.5
CDS-3UTR GCA 90 bp TCCCCCATCTGCAGCAGGGAGTTGATGGCGGCATCCTTGTTCCCTCGCTGGGCTGGCTCCTCCCCCATCTaGAGCAGGGAGTTGATGGCG +
Preference number: 4 (lower is better)
Translates to: SPICSRELMAASLFPRWAGSSPI*SRELMA
Trigger: CGCCATCAACTCCCTGCTGCAGATGGGGGAGGAGCC...AGCCCAGCGAGGGAACAAGGATGCCGCCATCAACTCCCTGCTGCAGATGGGGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000527938.5
ENST00000530506.5
CDS-3UTR GCA 90 bp CAGCAGGAGAGACGGACGGCAGCCTCCGGCGGGCGAAGGACCCGGCTTCAGATGCCTGGCAGAAGCAGCTaGTCTCTACAGCAAGAGCAT +
Preference number: 4 (lower is better)
Translates to: QQERRTAASGGRRTRLQMPGRSS*SLQQEH
Trigger: ATGCTCTTGCTGTAGAGAGCAGCTGCTTCTGCCAGG...CATCTGAAGCCGGGTCCTTCGCCCGCCGGAGGCTGCCGTCCGTCTCTCCTGCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR GCA 90 bp CGGGAATCTTGTTGGGACAGCATTCCTTGGGGAGCGCCGGGTCGGCGTGTCCAAGCAGTCGGCTGGCAGTaGCACCACACCCTCTCGGAA +
Preference number: 4 (lower is better)
Translates to: RESCWDSIPWGAPGRRVQAVGWQ*HHTLSE
Trigger: TTCCGAGAGGGTGTGGTGGCACTGCCAGCCGACTGC...TTGGACACGCCGACCCGGCGCTCCCCAAGGAATGCTGTCCCAACAAGATTCCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR GCA 90 bp CGCCCCGTCCTGGACCGCCAGGAACCGAAAACCCACATGCACCCAAGAACAGGTGCAGTCGGCTGGCAGTaGCACCACACCCTCTCGGAA +
Preference number: 4 (lower is better)
Translates to: RPVLDRQEPKTHMHPRTGAVGWQ*HHTLSE
Trigger: TTCCGAGAGGGTGTGGTGGCACTGCCAGCCGACTGC...ACCTGTTCTTGGGTGCATGTGGGTTTTCGGTTCCTGGCGGTCCAGGACGGGGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR GCA 90 bp ACAGCAGCTCCCAAGCTGTCAGCAGTCGGCTGGCAGTGCCACCACACCCTCTCGTCCTGTAGGCCAAGATaGTACACGCAGCGCCCAGGC +
Preference number: 4 (lower is better)
Translates to: TAAPKLSAVGWQCHHTLSSCRPR*YTQRPG
Trigger: GCCTGGGCGCTGCGTGTAGCATCTTGGCCTACAGGA...CGAGAGGGTGTGGTGGCACTGCCAGCCGACTGCTGACAGCTTGGGAGCTGCTGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR GCA 90 bp GCAGGGGCCACGTCCTCTCTAGGAGACACCCACAGAGCCACATGTGCACGCGTGTCCTGTAGGCCAAGATaGTACACGCAGCGCCCAGGC +
Preference number: 4 (lower is better)
Translates to: AGATSSLGDTHRATCARVSCRPR*YTQRPG
Trigger: GCCTGGGCGCTGCGTGTAGCATCTTGGCCTACAGGA...CACGCGTGCACATGTGGCTCTGTGGGTGTCTCCTAGAGAGGACGTGGCCCCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR GCA 90 bp AGACCCAAGCCCTGGGCAGGGGCCAGGCTCACAGCAAAGCGCGTTAGGGCAAGGATGCGGAGGAAGTCCTaGGGGAGCTCACCGATGTAC +
Preference number: 4 (lower is better)
Translates to: RPKPWAGARLTAKRVRARMRRKS*GSSPMY
Trigger: GTACATCGGTGAGCTCCCGCAGGACTTCCTCCGCAT...CCTTGCCCTAACGCGCTTTGCTGTGAGCCTGGCCCCTGCCCAGGGCTTGGGTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR GCA 90 bp ACCCCAGCCTCGCAAGGCCTGTTGAGAAGAGAAGCTCCCTGGGAGGACACCCACGCTGAAGAAGGCGCCTaGTGCCAGCATGTCCCTCCC +
Preference number: 4 (lower is better)
Translates to: TPASQGLLRREAPWEDTHAEEGA*CQHVPP
Trigger: GGGAGGGACATGCTGGCAGCAGGCGCCTTCTTCAGC...GTGGGTGTCCTCCCAGGGAGCTTCTCTTCTCAACAGGCCTTGCGAGGCTGGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR GCA 90 bp GCCTCGCAAGGCCTGTTGAGAAGAGAAGCTCCCTGGGAGGACACCCACGGAGCTGTCCTTAGTGACCGCTaGCACGGAGCTGGCGATCGG +
Preference number: 4 (lower is better)
Translates to: ASQGLLRREAPWEDTHGAVLSDR*HGAGDR
Trigger: CCGATCGCCAGCTCCGTGGCAGCGGTCACTAAGGAC...AGCTCCGTGGGTGTCCTCCCAGGGAGCTTCTCTTCTCAACAGGCCTTGCGAGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR GCA 90 bp CCTCTCACCCCAGCCTCGCAAGGCCTGTTGAGAAGAGAAGCTCCCTGGGAGGACGTCCTTAGTGACCGCTaGCACGGAGCTGGCGATCGG +
Preference number: 4 (lower is better)
Translates to: PLTPASQGLLRREAPWEDVLSDR*HGAGDR
Trigger: CCGATCGCCAGCTCCGTGGCAGCGGTCACTAAGGAC...GTCCTCCCAGGGAGCTTCTCTTCTCAACAGGCCTTGCGAGGCTGGGGTGAGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR CCA 90 bp ACAGCAGCTCCCAAGCTGTCAGCAGTCGGCTGGCAGTGCCACCACACCCTCTCGGGGGGCACCGTGCAGTaGATGACCTTATTCCAGCGG +
Preference number: 4 (lower is better)
Translates to: TAAPKLSAVGWQCHHTLSGGTVQ*MTLFQR
Trigger: CCGCTGGAATAAGGTCATCCACTGCACGGTGCCCCC...CGAGAGGGTGTGGTGGCACTGCCAGCCGACTGCTGACAGCTTGGGAGCTGCTGT
63% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000527886.5
CDS-3UTR CCA 90 bp CCCACATGCACCCAAGAACAGGTGTGGACGGGGCGGCACAGAAGTCCACGGGAGTCCGGGATGGTGATGTaGGTCCAGGCAATGCGGTCG +
Preference number: 4 (lower is better)
Translates to: PTCTQEQVWTGRHRSPRESGMVM*VQAMRS
Trigger: CGACCGCATTGCCTGGACCCACATCACCATCCCGGA...CTCCCGTGGACTTCTGTGCCGCCCCGTCCACACCTGTTCTTGGGTGCATGTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
ENST00000530506.5
CDS-3UTR CCA 90 bp TGCACCCAAGAACAGGTGTGGACGGGGCGGCACAGAAGTCCACGGGAGGGGGCGCATCACCATGGCAGCTaGAAGCAGCGCGTAGGACAT +
Preference number: 4 (lower is better)
Translates to: CTQEQVWTGRHRSPREGAHHHGS*KQRVGH
Trigger: ATGTCCTACGCGCTGCTTCCAGCTGCCATGGTGATG...CGCCCCCTCCCGTGGACTTCTGTGCCGCCCCGTCCACACCTGTTCTTGGGTGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
ENST00000530506.5
CDS-3UTR CCA 90 bp CGCACGTCCCAGGGACAGGAGAGCGCGCTGAGACCTCCCAGCACGAGATGGGAGCATCACCATGGCAGCTaGAAGCAGCGCGTAGGACAT +
Preference number: 4 (lower is better)
Translates to: RTSQGQESALRPPSTRWEHHHGS*KQRVGH
Trigger: ATGTCCTACGCGCTGCTTCCAGCTGCCATGGTGATG...CTCCCATCTCGTGCTGGGAGGTCTCAGCGCGCTCTCCTGTCCCTGGGACGTGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR CCA 90 bp GCCTCGCAAGGCCTGTTGAGAAGAGAAGCTCCCTGGGAGGACACCCACGGAGCTGGGGTGGCATCACCATaGCAGCTGGAAGCAGCGCGT +
Preference number: 4 (lower is better)
Translates to: ASQGLLRREAPWEDTHGAGVASP*QLEAAR
Trigger: ACGCGCTGCTTCCAGCTGCCATGGTGATGCCACCCC...AGCTCCGTGGGTGTCCTCCCAGGGAGCTTCTCTTCTCAACAGGCCTTGCGAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR CCA 90 bp TGTTCCCTCGCTGGGCTTCCAGCACGGAGCGGATCACCTCCTGGTCCATGTTGGGGGGTGGCATCACCATaGCAGCTGGAAGCAGCGCGT +
Preference number: 4 (lower is better)
Translates to: CSLAGLPARSGSPPGPCWGVASP*QLEAAR
Trigger: ACGCGCTGCTTCCAGCTGCCATGGTGATGCCACCCC...CCAACATGGACCAGGAGGTGATCCGCTCCGTGCTGGAAGCCCAGCGAGGGAACA
63% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000530506.5
CDS-3UTR CCA 90 bp GTCCGTTATCAGTGGGTTTACATCCGAAGGCCGGCGGCAAGACACTTGAACCACTCGCTACAGCGGGGCTaGGCGTTCACGGCGGCCGGG +
Preference number: 4 (lower is better)
Translates to: VRYQWVYIRRPAARHLNHSLQRG*AFTAAG
Trigger: CCCGGCCGCCGTGAACGCCCAGCCCCGCTGTAGCGA...GTGGTTCAAGTGTCTTGCCGCCGGCCTTCGGATGTAAACCCACTGATAACGGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR CCA 90 bp TCACCTCCTGGTCCATGTTGGGGAACATGTCCTGGATGGCTTTCAGGTCCTCCTTCGCTACAGCGGGGCTaGGCGTTCACGGCGGCCGGG +
Preference number: 4 (lower is better)
Translates to: SPPGPCWGTCPGWLSGPPSLQRG*AFTAAG
Trigger: CCCGGCCGCCGTGAACGCCCAGCCCCGCTGTAGCGA...AGGAGGACCTGAAAGCCATCCAGGACATGTTCCCCAACATGGACCAGGAGGTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000527938.5
ENST00000530506.5
CDS-3UTR CCA 90 bp CGGGAATCTTGTTGGGACAGCATTCCTTGGGGAGCGCCGGGTCGGCGTGTCCAATCCTTGTTCCCTCGCTaGGCTTCCAGCACGGAGCGG +
Preference number: 4 (lower is better)
Translates to: RESCWDSIPWGAPGRRVQSLFPR*ASSTER
Trigger: CCGCTCCGTGCTGGAAGCCCAGCGAGGGAACAAGGA...TTGGACACGCCGACCCGGCGCTCCCCAAGGAATGCTGTCCCAACAAGATTCCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
ENST00000530506.5
CDS-3UTR CCA 90 bp CTCTTTCACGGGAATCTTGTTGGGACAGCATTCCTTGGGGAGCGCCGGGTCGGCTGGGACAGCATTCCTTaGGGAGCGCCGGGTCGGCGT +
Preference number: 4 (lower is better)
Translates to: LFHGNLVGTAFLGERRVGWDSIP*GAPGRR
Trigger: ACGCCGACCCGGCGCTCCCCAAGGAATGCTGTCCCA...GCCGACCCGGCGCTCCCCAAGGAATGCTGTCCCAACAAGATTCCCGTGAAAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
ENST00000530506.5
CDS-3UTR CCA 90 bp ACCTCTCACCCCAGCCTCGCAAGGCCTGTTGAGAAGAGAAGCTCCCTGGGAGGAAGGCTGGCTGGACAGTaGCCAGGTGAGCCAGGCCAG +
Preference number: 4 (lower is better)
Translates to: TSHPSLARPVEKRSSLGGRLAGQ*PGEPGQ
Trigger: CTGGCCTGGCTCACCTGGCCACTGTCCAGCCAGCCT...TCCTCCCAGGGAGCTTCTCTTCTCAACAGGCCTTGCGAGGCTGGGGTGAGAGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR CCA 90 bp TCCCAGGGGCCCCTCCGTCTGAGTGGTCGGCGTCTGCTGAACAAATACCATGTCAGGCTGGCTGGACAGTaGCCAGGTGAGCCAGGCCAG +
Preference number: 4 (lower is better)
Translates to: SQGPLRLSGRRLLNKYHVRLAGQ*PGEPGQ
Trigger: CTGGCCTGGCTCACCTGGCCACTGTCCAGCCAGCCT...GACATGGTATTTGTTCAGCAGACGCCGACCACTCAGACGGAGGGGCCCCTGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR CCA 90 bp TTGTTGGGACAGCATTCCTTGGGGAGCGCCGGGTCGGCGTGTCCAAAGAGCGGGGCTTCAGATGCCCGCTaGCTGGCAATCAGGCAGAGC +
Preference number: 4 (lower is better)
Translates to: LLGQHSLGSAGSACPKSGASDAR*LAIRQS
Trigger: GCTCTGCCTGATTGCCAGCCAGCGGGCATCTGAAGC...CCCGCTCTTTGGACACGCCGACCCGGCGCTCCCCAAGGAATGCTGTCCCAACAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR CCA 90 bp GCAGGGGCCACGTCCTCTCTAGGAGACACCCACAGAGCCACATGTGCACGCGTGGCTTCAGATGCCCGCTaGCTGGCAATCAGGCAGAGC +
Preference number: 4 (lower is better)
Translates to: AGATSSLGDTHRATCARVASDAR*LAIRQS
Trigger: GCTCTGCCTGATTGCCAGCCAGCGGGCATCTGAAGC...CACGCGTGCACATGTGGCTCTGTGGGTGTCTCCTAGAGAGGACGTGGCCCCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR CCA 90 bp ACCCCAGCCTCGCAAGGCCTGTTGAGAAGAGAAGCTCCCTGGGAGGACACCCACCTGTCAGCAGTCGGCTaGCAGTGCCACCACACCCTC +
Preference number: 4 (lower is better)
Translates to: TPASQGLLRREAPWEDTHLSAVG*QCHHTL
Trigger: GAGGGTGTGGTGGCACTGCCAGCCGACTGCTGACAG...GTGGGTGTCCTCCCAGGGAGCTTCTCTTCTCAACAGGCCTTGCGAGGCTGGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR CCA 90 bp ACCCACATGCACCCAAGAACAGGTGTGGACGGGGCGGCACAGAAGTCCACGGGAGCTGAACCCACGTCCTaGGCACAGCAGCTCCCAAGC +
Preference number: 4 (lower is better)
Translates to: THMHPRTGVDGAAQKSTGAEPTS*AQQLPS
Trigger: GCTTGGGAGCTGCTGTGCCCAGGACGTGGGTTCAGC...TCCCGTGGACTTCTGTGCCGCCCCGTCCACACCTGTTCTTGGGTGCATGTGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR CCA 90 bp AGGCAGTCAGAGGTAAGTGAGCGCCTCCCGCCTCAGAAAGCTTTTACAGGGCCAAGCTGCTGGGCCGCCTaGGCGTCCAGCTGGACCTGC +
Preference number: 4 (lower is better)
Translates to: RQSEVSERLPPQKAFTGPSCWAA*ASSWTC
Trigger: GCAGGTCCAGCTGGACGCCCAGGCGGCCCAGCAGCT...TGGCCCTGTAAAAGCTTTCTGAGGCGGGAGGCGCTCACTTACCTCTGACTGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR CCA 90 bp GAACCGAAAACCCACATGCACCCAAGAACAGGTGTGGACGGGGCGGCACAGAAGGGCAGAAACCGGTGCTaGTGGCCACACCTGGGCGCC +
Preference number: 4 (lower is better)
Translates to: EPKTHMHPRTGVDGAAQKGRNRC*WPHLGA
Trigger: GGCGCCCAGGTGTGGCCACCAGCACCGGTTTCTGCC...CTTCTGTGCCGCCCCGTCCACACCTGTTCTTGGGTGCATGTGGGTTTTCGGTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR TCA 90 bp GTCAGGCTGTCCTTAGTGACCGCTGCCACGGAGCTGGCGATCGGCCTGCATCTTTTGCCTGTACCACCGTaGTGTTCAGTCGGCCCACGG +
Preference number: 4 (lower is better)
Translates to: VRLSLVTAATELAIGLHLLPVPP*CSVGPR
Trigger: CCGTGGGCCGACTGAACATCACGGTGGTACAGGCAA...AAGATGCAGGCCGATCGCCAGCTCCGTGGCAGCGGTCACTAAGGACAGCCTGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317204.11
ENST00000527886.5
CDS-3UTR TCA 90 bp CCTCTCACCCCAGCCTCGCAAGGCCTGTTGAGAAGAGAAGCTCCCTGGGAGGACTTGCCTGTACCACCGTaGTGTTCAGTCGGCCCACGG +
Preference number: 4 (lower is better)
Translates to: PLTPASQGLLRREAPWEDLPVPP*CSVGPR
Trigger: CCGTGGGCCGACTGAACATCACGGTGGTACAGGCAA...GTCCTCCCAGGGAGCTTCTCTTCTCAACAGGCCTTGCGAGGCTGGGGTGAGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000527886.5
CDS-3UTR TCA 90 bp AAGTCCACGGGAGGGGGCGACACGGGTGCTCTTTCACGGGAATCTTGTTGGGACGGGACTCCGGGATGGTaGTGTGGGTCCAGGCAATGC +
Preference number: 4 (lower is better)
Translates to: KSTGGGDTGALSRESCWDGTPGW*CGSRQC
Trigger: GCATTGCCTGGACCCACATCACCATCCCGGAGTCCC...GTCCCAACAAGATTCCCGTGAAAGAGCACCCGTGTCGCCCCCTCCCGTGGACTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
ENST00000530506.5
CDS-3UTR TCA 90 bp CGGGTGCTCTTTCACGGGAATCTTGTTGGGACAGCATTCCTTGGGGAGCGCCGGCAGCGGGCATCCCTGTaGTGGGCACATAGCCAACGC +
Preference number: 4 (lower is better)
Translates to: RVLFHGNLVGTAFLGERRQRASL*WAHSQR
Trigger: GCGTTGGCTATGTGCCCATCACAGGGATGCCCGCTG...CCGGCGCTCCCCAAGGAATGCTGTCCCAACAAGATTCCCGTGAAAGAGCACCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR TCA 90 bp GGGACAGCATTCCTTGGGGAGCGCCGGGTCGGCGTGTCCAAAGAGCGGGGGCAAGTTAGGGCAAGGGCGTaGGTTTTCGTCTGGGAAGTT +
Preference number: 4 (lower is better)
Translates to: GTAFLGERRVGVSKERGQVRARA*VFVWEV
Trigger: AACTTCCCAGACGAAAACTCACGCCCTTGCCCTAAC...TTGCCCCCGCTCTTTGGACACGCCGACCCGGCGCTCCCCAAGGAATGCTGTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR TCA 90 bp CCTCTCACCCCAGCCTCGCAAGGCCTGTTGAGAAGAGAAGCTCCCTGGGAGGACCCTCGCAAGGCCTGTTaGGAAGAGAAGCTCCCTGGG +
Preference number: 4 (lower is better)
Translates to: PLTPASQGLLRREAPWEDPRKAC*EEKLPG
Trigger: CCCAGGGAGCTTCTCTTCTCAACAGGCCTTGCGAGG...GTCCTCCCAGGGAGCTTCTCTTCTCAACAGGCCTTGCGAGGCTGGGGTGAGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR TCA 90 bp AAACCCACATGCACCCAAGAACAGGTGTGGACGGGGCGGCACAGAAGTCCACGGTTTCCTCGCCCACGCTaGACCCACGTCCTGGGCACA +
Preference number: 4 (lower is better)
Translates to: KPTCTQEQVWTGRHRSPRFPRPR*THVLGT
Trigger: TGTGCCCAGGACGTGGGTTCAGCGTGGGCGAGGAAA...CCGTGGACTTCTGTGCCGCCCCGTCCACACCTGTTCTTGGGTGCATGTGGGTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR TCA 90 bp AAAACCCACATGCACCCAAGAACAGGTGTGGACGGGGCGGCACAGAAGTCCACGGCTGCTGTGTGGGCGTaGTGCGGAGGAAGTCCTGCG +
Preference number: 4 (lower is better)
Translates to: KTHMHPRTGVDGAAQKSTAAVWA*CGGSPA
Trigger: CGCAGGACTTCCTCCGCATCACGCCCACACAGCAGC...CGTGGACTTCTGTGCCGCCCCGTCCACACCTGTTCTTGGGTGCATGTGGGTTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR TCA 90 bp CCTCCTGGTCCATGTTGGGGAACATGTCCTGGATGGCTTTCAGGTCCTCCTCGCGCTGCTGTGTGGGCGTaGTGCGGAGGAAGTCCTGCG +
Preference number: 4 (lower is better)
Translates to: PPGPCWGTCPGWLSGPPRAAVWA*CGGSPA
Trigger: CGCAGGACTTCCTCCGCATCACGCCCACACAGCAGC...GCGAGGAGGACCTGAAAGCCATCCAGGACATGTTCCCCAACATGGACCAGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527938.5
CDS-3UTR TCA 90 bp ACAGCAGCTCCCAAGCTGTCAGCAGTCGGCTGGCAGTGCCACCACACCCTCTCGCGTTCCAGTCCCGCCTaGCACCTTCATTCCCAATGG +
Preference number: 4 (lower is better)
Translates to: TAAPKLSAVGWQCHHTLSRSSPA*HLHSQW
Trigger: CCATTGGGAATGAAGGTGTCAGGCGGGACTGGAACG...CGAGAGGGTGTGGTGGCACTGCCAGCCGACTGCTGACAGCTTGGGAGCTGCTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR GCA 90 bp GTCAGGCTGTCCTTAGTGACCGCTGCCACGGAGCTGGCGATCGGCCTGCATCTTCTTGGCGCCATTGTGTaGCGTGGGCGTCTCGTACAC +
Preference number: 4 (lower is better)
Translates to: VRLSLVTAATELAIGLHLLGAIV*RGRLVH
Trigger: GTGTACGAGACGCCCACGGCACACAATGGCGCCAAG...AAGATGCAGGCCGATCGCCAGCTCCGTGGCAGCGGTCACTAAGGACAGCCTGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317204.11
ENST00000527886.5
CDS-3UTR GCA 90 bp TTGTTGGGACAGCATTCCTTGGGGAGCGCCGGGTCGGCGTGTCCAAAGAGCGGGTGTGGGTCCAGGCAATaGGGTCGTCCATGGAGAAGG +
Preference number: 4 (lower is better)
Translates to: LLGQHSLGSAGSACPKSGCGSRQ*GRPWRR
Trigger: CCTTCTCCATGGACGACCGCATTGCCTGGACCCACA...CCCGCTCTTTGGACACGCCGACCCGGCGCTCCCCAAGGAATGCTGTCCCAACAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
ENST00000530506.5
CDS-3UTR GCA 90 bp TTAGTGACCGCTGCCACGGAGCTGGCGATCGGCCTGCATCTTCAAACCCAGGAGTCCTTGTCGTCCCCCTaGCTCCCGCTCAGGCTGTAC +
Preference number: 4 (lower is better)
Translates to: LVTAATELAIGLHLQTQESLSSP*LPLRLY
Trigger: GTACAGCCTGAGCGGGAGGCAGGGGGACGACAAGGA...CTCCTGGGTTTGAAGATGCAGGCCGATCGCCAGCTCCGTGGCAGCGGTCACTAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR GCA 90 bp TCTTTCACGGGAATCTTGTTGGGACAGCATTCCTTGGGGAGCGCCGGGTCGGCGTCCTTGTCGTCCCCCTaGCTCCCGCTCAGGCTGTAC +
Preference number: 4 (lower is better)
Translates to: SFTGILLGQHSLGSAGSASLSSP*LPLRLY
Trigger: GTACAGCCTGAGCGGGAGGCAGGGGGACGACAAGGA...CGCCGACCCGGCGCTCCCCAAGGAATGCTGTCCCAACAAGATTCCCGTGAAAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
ENST00000530506.5
CDS-3UTR GCA 90 bp TCACCTCCTGGTCCATGTTGGGGAACATGTCCTGGATGGCTTTCAGGTCCTCCTGGGCCACGGGCACCATaGCGGGGCTACAGACAGCGG +
Preference number: 4 (lower is better)
Translates to: SPPGPCWGTCPGWLSGPPGPRAP*RGYRQR
Trigger: CCGCTGTCTGTAGCCCCGGCATGGTGCCCGTGGCCC...AGGAGGACCTGAAAGCCATCCAGGACATGTTCCCCAACATGGACCAGGAGGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000527938.5
ENST00000530506.5
CDS-3UTR GCA 90 bp CTCAGACGGGCTCCAAGCAGGGTACAGCCCCAACGCGTCAGTGTCAGCTTCATCGGCTCCTCCCCCATCTaGAGCAGGGAGTTGATGGCG +
Preference number: 4 (lower is better)
Translates to: LRRAPSRVQPQRVSVSFIGSSPI*SRELMA
Trigger: CGCCATCAACTCCCTGCTGCAGATGGGGGAGGAGCC...GATGAAGCTGACACTGACGCGTTGGGGCTGTACCCTGCTTGGAGCCCGTCTGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000530506.5
CDS-3UTR GCA 90 bp GGGAGCGCCGGGTCGGCGTGTCCAAAGAGCGGGGGCAAAACGGCATCGAGGCAGAACCGAAAACCCACATaGACCCAAGAACAGGTGTGG +
Preference number: 4 (lower is better)
Translates to: GSAGSACPKSGGKTASRQNRKPT*TQEQVW
Trigger: CCACACCTGTTCTTGGGTGCATGTGGGTTTTCGGTT...CTGCCTCGATGCCGTTTTGCCCCCGCTCTTTGGACACGCCGACCCGGCGCTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
ENST00000530506.5
CDS-3UTR GCA 90 bp GGTGTGGACGGGGCGGCACAGAAGTCCACGGGAGGGGGCGACACGGGTGCTCTTAACCGAAAACCCACATaGACCCAAGAACAGGTGTGG +
Preference number: 4 (lower is better)
Translates to: GVDGAAQKSTGGGDTGALNRKPT*TQEQVW
Trigger: CCACACCTGTTCTTGGGTGCATGTGGGTTTTCGGTT...AAGAGCACCCGTGTCGCCCCCTCCCGTGGACTTCTGTGCCGCCCCGTCCACACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
ENST00000530506.5
CDS-3UTR GCA 90 bp CGCACGTCCCAGGGACAGGAGAGCGCGCTGAGACCTCCCAGCACGAGATGGGAGCCTGGCAGAAGCAGCTaGTCTCTACAGCAAGAGCAT +
Preference number: 4 (lower is better)
Translates to: RTSQGQESALRPPSTRWEPGRSS*SLQQEH
Trigger: ATGCTCTTGCTGTAGAGAGCAGCTGCTTCTGCCAGG...CTCCCATCTCGTGCTGGGAGGTCTCAGCGCGCTCTCCTGTCCCTGGGACGTGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR GCA 90 bp AAAACCCACATGCACCCAAGAACAGGTGTGGACGGGGCGGCACAGAAGTCCACGGAGCCTGGCCAACCGTaGCAGGCCCCCTTCCTCACT +
Preference number: 4 (lower is better)
Translates to: KTHMHPRTGVDGAAQKSTEPGQP*QAPFLT
Trigger: AGTGAGGAAGGGGGCCTGGCACGGTTGGCCAGGCTC...CGTGGACTTCTGTGCCGCCCCGTCCACACCTGTTCTTGGGTGCATGTGGGTTTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR GCA 90 bp CTCTTTCACGGGAATCTTGTTGGGACAGCATTCCTTGGGGAGCGCCGGGTCGGCGGACCCGGCTTCAGATaGCCGCTGGCTGGCAATCAG +
Preference number: 4 (lower is better)
Translates to: LFHGNLVGTAFLGERRVGGPGFR*PLAGNQ
Trigger: CTGATTGCCAGCCAGCGGGCATCTGAAGCCGGGTCC...GCCGACCCGGCGCTCCCCAAGGAATGCTGTCCCAACAAGATTCCCGTGAAAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR GCA 90 bp TCCGGCGACCTGTCTTCTATCTCCGGAGCCCCGCCTGAGGCTCCAAGATGGCACATGCGGAGGAAGTCCTaGGGGAGCTCACCGATGTAC +
Preference number: 4 (lower is better)
Translates to: SGDLSSISGAPPEAPRWHMRRKS*GSSPMY
Trigger: GTACATCGGTGAGCTCCCGCAGGACTTCCTCCGCAT...GTGCCATCTTGGAGCCTCAGGCGGGGCTCCGGAGATAGAAGACAGGTCGCCGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR GCA 90 bp CTCTTTCACGGGAATCTTGTTGGGACAGCATTCCTTGGGGAGCGCCGGGTCGGCAGCTGGACCTGCCGCTaGTGCTGTGTGGGCGTGATG +
Preference number: 4 (lower is better)
Translates to: LFHGNLVGTAFLGERRVGSWTCR*CCVGVM
Trigger: CATCACGCCCACACAGCAGCAGCGGCAGGTCCAGCT...GCCGACCCGGCGCTCCCCAAGGAATGCTGTCCCAACAAGATTCCCGTGAAAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR GCA 90 bp CCCCGCCTGAGGCTCCAAGATGGCACAGTCAGGCTGTCCTTAGTGACCGCTGCCAGCTGGCGATCGGCCTaGATCTTCAAACCCAGGAGC +
Preference number: 4 (lower is better)
Translates to: PRLRLQDGTVRLSLVTAASWRSA*IFKPRS
Trigger: GCTCCTGGGTTTGAAGATGCAGGCCGATCGCCAGCT...GGCAGCGGTCACTAAGGACAGCCTGACTGTGCCATCTTGGAGCCTCAGGCGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR GCA 90 bp CTGCGGACTCAGACGGGCTCCAAGCAGGGTACAGCCCCAACGCGTCAGTGTCAGTGCCAGGGACGCCCCTaGTTATTGGAAACGCATGCC +
Preference number: 4 (lower is better)
Translates to: LRTQTGSKQGTAPTRQCQCQGRP*LLETHA
Trigger: GGCATGCGTTTCCAATAAGCAGGGGCGTCCCTGGCA...CTGACACTGACGCGTTGGGGCTGTACCCTGCTTGGAGCCCGTCTGAGTCCGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530506.5
CDS-3UTR CCA 90 bp GCCTCGCAAGGCCTGTTGAGAAGAGAAGCTCCCTGGGAGGACACCCACGGAGCTTCCAGCGGGGATTCTTaGCGCCATTGTGTGCCGTGG +
Preference number: 4 (lower is better)
Translates to: ASQGLLRREAPWEDTHGASSGDS*RHCVPW
Trigger: CCACGGCACACAATGGCGCCAAGAATCCCCGCTGGA...AGCTCCGTGGGTGTCCTCCCAGGGAGCTTCTCTTCTCAACAGGCCTTGCGAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000527886.5
CDS-3UTR CCA 90 bp GACCGCCAGGAACCGAAAACCCACATGCACCCAAGAACAGGTGTGGACGGGGCGGGGGGCACCGTGCAGTaGATGACCTTATTCCAGCGG +
Preference number: 4 (lower is better)
Translates to: DRQEPKTHMHPRTGVDGAGGTVQ*MTLFQR
Trigger: CCGCTGGAATAAGGTCATCCACTGCACGGTGCCCCC...CGCCCCGTCCACACCTGTTCTTGGGTGCATGTGGGTTTTCGGTTCCTGGCGGTC
62% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000527886.5
ENST00000530506.5
CDS-3UTR CCA 90 bp ACCCACATGCACCCAAGAACAGGTGTGGACGGGGCGGCACAGAAGTCCACGGGAGAAAGAGTCCACGCCTaGGGGCACCGTGCAGTGGAT +
Preference number: 4 (lower is better)
Translates to: THMHPRTGVDGAAQKSTGERVHA*GHRAVD
Trigger: ATCCACTGCACGGTGCCCCCAGGCGTGGACTCTTTC...TCCCGTGGACTTCTGTGCCGCCCCGTCCACACCTGTTCTTGGGTGCATGTGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000527886.5
ENST00000530506.5
CDS-3UTR CCA 90 bp GACCGCCAGGAACCGAAAACCCACATGCACCCAAGAACAGGTGTGGACGGGGCGTCCGGGATGGTGATGTaGGTCCAGGCAATGCGGTCG +
Preference number: 4 (lower is better)
Translates to: DRQEPKTHMHPRTGVDGASGMVM*VQAMRS
Trigger: CGACCGCATTGCCTGGACCCACATCACCATCCCGGA...CGCCCCGTCCACACCTGTTCTTGGGTGCATGTGGGTTTTCGGTTCCTGGCGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
ENST00000530506.5
CDS-3UTR CCA 90 bp CGCCCCGTCCTGGACCGCCAGGAACCGAAAACCCACATGCACCCAAGAACAGGTTCCGGGATGGTGATGTaGGTCCAGGCAATGCGGTCG +
Preference number: 4 (lower is better)
Translates to: RPVLDRQEPKTHMHPRTGSGMVM*VQAMRS
Trigger: CGACCGCATTGCCTGGACCCACATCACCATCCCGGA...ACCTGTTCTTGGGTGCATGTGGGTTTTCGGTTCCTGGCGGTCCAGGACGGGGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
ENST00000530506.5
CDS-3UTR CCA 90 bp GGCCGTACTGTGCCAGGGACGCCCCTGCTTATTGGAAACGCATGCCTGGGCATGATCAGGACCACGGGCTaGGGTGGCATCACCATGGCA +
Preference number: 4 (lower is better)
Translates to: GRTVPGTPLLIGNACLGMIRTTG*GGITMA
Trigger: TGCCATGGTGATGCCACCCCAGCCCGTGGTCCTGAT...CATGCCCAGGCATGCGTTTCCAATAAGCAGGGGCGTCCCTGGCACAGTACGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530506.5
CDS-3UTR CCA 90 bp CCACATGCACCCAAGAACAGGTGTGGACGGGGCGGCACAGAAGTCCACGGGAGGCTGCTGGTACACTGTTaGCATCAGGACCACGGGCTG +
Preference number: 4 (lower is better)
Translates to: PHAPKNRCGRGGTEVHGRLLVHC*HQDHGL
Trigger: CAGCCCGTGGTCCTGATGCCAACAGTGTACCAGCAG...CCTCCCGTGGACTTCTGTGCCGCCCCGTCCACACCTGTTCTTGGGTGCATGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
ENST00000530506.5
CDS-3UTR CCA 90 bp GTTGATGGCGGCATCCTTGTTCCCTCGCTGGGCTTCCAGCACGGAGCGGATCACGAGGCAGAGGCTCTATaGCTCCTCCCCCATCTGCAG +
Preference number: 4 (lower is better)
Translates to: VDGGILVPSLGFQHGADHEAEAL*LLPHLQ
Trigger: CTGCAGATGGGGGAGGAGCCATAGAGCCTCTGCCTC...GTGATCCGCTCCGTGCTGGAAGCCCAGCGAGGGAACAAGGATGCCGCCATCAAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000527938.5
ENST00000530506.5
CDS-3UTR CCA 90 bp GGTGTGGACGGGGCGGCACAGAAGTCCACGGGAGGGGGCGACACGGGTGCTCTTTCACGGGAATCTTGTTaGGACAGCATTCCTTGGGGA +
Preference number: 4 (lower is better)
Translates to: GVDGAAQKSTGGGDTGALSRESC*DSIPWG
Trigger: TCCCCAAGGAATGCTGTCCCAACAAGATTCCCGTGA...AAGAGCACCCGTGTCGCCCCCTCCCGTGGACTTCTGTGCCGCCCCGTCCACACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
ENST00000530506.5
CDS-3UTR CCA 90 bp CCACATGCACCCAAGAACAGGTGTGGACGGGGCGGCACAGAAGTCCACGGGAGGCCACCTCCAACACCCTaGCAGAAGCAGCTGCTCTCT +
Preference number: 4 (lower is better)
Translates to: PHAPKNRCGRGGTEVHGRPPPTP*QKQLLS
Trigger: AGAGAGCAGCTGCTTCTGCCAGGGTGTTGGAGGTGG...CCTCCCGTGGACTTCTGTGCCGCCCCGTCCACACCTGTTCTTGGGTGCATGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR CCA 90 bp GAAAACCCACATGCACCCAAGAACAGGTGTGGACGGGGCGGCACAGAAGTCCACCAATCAGGCAGAGCCTaGCCAACCGTGCCAGGCCCC +
Preference number: 4 (lower is better)
Translates to: ENPHAPKNRCGRGGTEVHQSGRA*PTVPGP
Trigger: GGGGCCTGGCACGGTTGGCCAGGCTCTGCCTGATTG...GTGGACTTCTGTGCCGCCCCGTCCACACCTGTTCTTGGGTGCATGTGGGTTTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR CCA 90 bp AAACCCACATGCACCCAAGAACAGGTGTGGACGGGGCGGCACAGAAGTCCACGGGCTGAACCCACGTCCTaGGCACAGCAGCTCCCAAGC +
Preference number: 4 (lower is better)
Translates to: KPTCTQEQVWTGRHRSPRAEPTS*AQQLPS
Trigger: GCTTGGGAGCTGCTGTGCCCAGGACGTGGGTTCAGC...CCGTGGACTTCTGTGCCGCCCCGTCCACACCTGTTCTTGGGTGCATGTGGGTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR CCA 90 bp GGGAGCGCCGGGTCGGCGTGTCCAAAGAGCGGGGGCAAAACGGCATCGAGGCAGCAGAAGACCCACTTGTaGGCATTCTCTTTCTGTCCG +
Preference number: 4 (lower is better)
Translates to: GSAGSACPKSGGKTASRQQKTHL*AFSFCP
Trigger: CGGACAGAAAGAGAATGCCCACAAGTGGGTCTTCTG...CTGCCTCGATGCCGTTTTGCCCCCGCTCTTTGGACACGCCGACCCGGCGCTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR CCA 90 bp GCCTCGCAAGGCCTGTTGAGAAGAGAAGCTCCCTGGGAGGACACCCACGGAGCTGCCCCTCCGTCTGAGTaGTCGGCGTCTGCTGAACAA +
Preference number: 4 (lower is better)
Translates to: ASQGLLRREAPWEDTHGAAPPSE*SASAEQ
Trigger: TTGTTCAGCAGACGCCGACCACTCAGACGGAGGGGC...AGCTCCGTGGGTGTCCTCCCAGGGAGCTTCTCTTCTCAACAGGCCTTGCGAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR CCA 90 bp CCACGGAGCTGGCACGAGCGCAGCAGGAGAGACGGACGGCAGCCTCCGGCGGGCCACCTTCATTCCCAATaGAGAAGAAATCTACACAGG +
Preference number: 4 (lower is better)
Translates to: PRSWHERSRRDGRQPPAGHLHSQ*RRNLHR
Trigger: CCTGTGTAGATTTCTTCTCCATTGGGAATGAAGGTG...GCCCGCCGGAGGCTGCCGTCCGTCTCTCCTGCTGCGCTCGTGCCAGCTCCGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR CCA 90 bp GAGGGGGCGACACGGGTGCTCTTTCACGGGAATCTTGTTGGGACAGCATTCCTTGCTGGTGGCCACACCTaGGCGCCTGGACACCGAAGC +
Preference number: 4 (lower is better)
Translates to: EGATRVLFHGNLVGTAFLAGGHT*APGHRS
Trigger: GCTTCGGTGTCCAGGCGCCCAGGTGTGGCCACCAGC...AAGGAATGCTGTCCCAACAAGATTCCCGTGAAAGAGCACCCGTGTCGCCCCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR CCA 90 bp AGGGCTGGCAGCAGGGGCCACGTCCTCTCTAGGAGACACCCACAGAGCCACATGCCTCCCCTTGTGAGCTaGCAGACAAGCCTGTCCTTC +
Preference number: 4 (lower is better)
Translates to: RAGSRGHVLSRRHPQSHMPPLVS*QTSLSF
Trigger: GAAGGACAGGCTTGTCTGCCAGCTCACAAGGGGAGG...CATGTGGCTCTGTGGGTGTCTCCTAGAGAGGACGTGGCCCCTGCTGCCAGCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR TCA 90 bp GGGGGCGACACGGGTGCTCTTTCACGGGAATCTTGTTGGGACAGCATTCCTTGGCAGCGGGCATCCCTGTaGTGGGCACATAGCCAACGC +
Preference number: 4 (lower is better)
Translates to: GGDTGALSRESCWDSIPWQRASL*WAHSQR
Trigger: GCGTTGGCTATGTGCCCATCACAGGGATGCCCGCTG...CCAAGGAATGCTGTCCCAACAAGATTCCCGTGAAAGAGCACCCGTGTCGCCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR TCA 90 bp GTCAGGCTGTCCTTAGTGACCGCTGCCACGGAGCTGGCGATCGGCCTGCATCTTTCTGCAGCAGGGAGTTaGTGGCGGCATCCTTGTTCC +
Preference number: 4 (lower is better)
Translates to: VRLSLVTAATELAIGLHLSAAGS*WRHPCS
Trigger: GGAACAAGGATGCCGCCATCAACTCCCTGCTGCAGA...AAGATGCAGGCCGATCGCCAGCTCCGTGGCAGCGGTCACTAAGGACAGCCTGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR TCA 90 bp CGGGTGCTCTTTCACGGGAATCTTGTTGGGACAGCATTCCTTGGGGAGCGCCGGGCAGTCAGAGGTAAGTaGGCGCCTCCCGCCTCAGAA +
Preference number: 4 (lower is better)
Translates to: RVLFHGNLVGTAFLGERRAVRGK*APPASE
Trigger: TTCTGAGGCGGGAGGCGCTCACTTACCTCTGACTGC...CCGGCGCTCCCCAAGGAATGCTGTCCCAACAAGATTCCCGTGAAAGAGCACCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR TCA 90 bp AGCCCTGGGCAGGGGCCAGGCTCACAGCAAAGCGCGTTAGGGCAAGGGCGTGAGGTGGTCGGCGTCTGCTaGACAAATACCATGTCTTTC +
Preference number: 4 (lower is better)
Translates to: SPGQGPGSQQSALGQGREVVGVC*TNTMSF
Trigger: GAAAGACATGGTATTTGTTCAGCAGACGCCGACCAC...CTCACGCCCTTGCCCTAACGCGCTTTGCTGTGAGCCTGGCCCCTGCCCAGGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR TCA 90 bp GTTGGGACAGCATTCCTTGGGGAGCGCCGGGTCGGCGTGTCCAAAGAGCGGGGGGTGGTCGGCGTCTGCTaGACAAATACCATGTCTTTC +
Preference number: 4 (lower is better)
Translates to: VGTAFLGERRVGVSKERGVVGVC*TNTMSF
Trigger: GAAAGACATGGTATTTGTTCAGCAGACGCCGACCAC...CCCCCGCTCTTTGGACACGCCGACCCGGCGCTCCCCAAGGAATGCTGTCCCAAC
61% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR TCA 90 bp CCTCTCACCCCAGCCTCGCAAGGCCTGTTGAGAAGAGAAGCTCCCTGGGAGGACCGTTCCAGTCCCGCCTaGCACCTTCATTCCCAATGG +
Preference number: 4 (lower is better)
Translates to: PLTPASQGLLRREAPWEDRSSPA*HLHSQW
Trigger: CCATTGGGAATGAAGGTGTCAGGCGGGACTGGAACG...GTCCTCCCAGGGAGCTTCTCTTCTCAACAGGCCTTGCGAGGCTGGGGTGAGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR TCA 90 bp ACCCCAGCCTCGCAAGGCCTGTTGAGAAGAGAAGCTCCCTGGGAGGACACCCACCGTTCCAGTCCCGCCTaGCACCTTCATTCCCAATGG +
Preference number: 4 (lower is better)
Translates to: TPASQGLLRREAPWEDTHRSSPA*HLHSQW
Trigger: CCATTGGGAATGAAGGTGTCAGGCGGGACTGGAACG...GTGGGTGTCCTCCCAGGGAGCTTCTCTTCTCAACAGGCCTTGCGAGGCTGGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR TCA 90 bp CAAGAGCATTTTCCAGAACGGCATGAGAAGGAGAGACGCACGTCCCAGGGACAGCTCCGGAGCCCCGCCTaGGGCTCCAAGATGGCACAG +
Preference number: 4 (lower is better)
Translates to: QEHFPERHEKERRTSQGQLRSPA*GSKMAQ
Trigger: CTGTGCCATCTTGGAGCCTCAGGCGGGGCTCCGGAG...CTGTCCCTGGGACGTGCGTCTCTCCTTCTCATGCCGTTCTGGAAAATGCTCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR TCA 90 bp GTCCGTTATCAGTGGGTTTACATCCGAAGGCCGGCGGCAAGACACTTGAACCACCTCCGGAGCCCCGCCTaGGGCTCCAAGATGGCACAG +
Preference number: 4 (lower is better)
Translates to: VRYQWVYIRRPAARHLNHLRSPA*GSKMAQ
Trigger: CTGTGCCATCTTGGAGCCTCAGGCGGGGCTCCGGAG...GTGGTTCAAGTGTCTTGCCGCCGGCCTTCGGATGTAAACCCACTGATAACGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR TCA 90 bp CTCTTTCACGGGAATCTTGTTGGGACAGCATTCCTTGGGGAGCGCCGGGTCGGCCAGAAGCGCACGTTCTaGGACCACTCCTGCCTGGCA +
Preference number: 4 (lower is better)
Translates to: LFHGNLVGTAFLGERRVGQKRTF*DHSCLA
Trigger: TGCCAGGCAGGAGTGGTCTCAGAACGTGCGCTTCTG...GCCGACCCGGCGCTCCCCAAGGAATGCTGTCCCAACAAGATTCCCGTGAAAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR TCA 90 bp TCCCAGGGGCCCCTCCGTCTGAGTGGTCGGCGTCTGCTGAACAAATACCATGTCCTCTCTGTACCACCGTaGTGTTCAGTCGGCCCACGG +
Preference number: 4 (lower is better)
Translates to: SQGPLRLSGRRLLNKYHVLSVPP*CSVGPR
Trigger: CCGTGGGCCGACTGAACATCACGGTGGTACAGAGAG...GACATGGTATTTGTTCAGCAGACGCCGACCACTCAGACGGAGGGGCCCCTGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525159.5
CDS-3UTR TCA 90 bp GACCGCCAGGAACCGAAAACCCACATGCACCCAAGAACAGGTGTGGACGGGGCGTCCACACCAGCCTCCTaGCACTCCCCAAAACCCACT +
Preference number: 4 (lower is better)
Translates to: DRQEPKTHMHPRTGVDGASTPAS*HSPKPT
Trigger: AGTGGGTTTTGGGGAGTGTCAGGAGGCTGGTGTGGA...CGCCCCGTCCACACCTGTTCTTGGGTGCATGTGGGTTTTCGGTTCCTGGCGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000527886.5
CDS-3UTR GCA 90 bp AGACCCAAGCCCTGGGCAGGGGCCAGGCTCACAGCAAAGCGCGTTAGGGCAAGGGGTCCATGCGGGTCATaGCGTAATTCTTGGCCAACT +
Preference number: 4 (lower is better)
Translates to: RPKPWAGARLTAKRVRARGPCGS*RNSWPT
Trigger: AGTTGGCCAAGAATTACGGCATGACCCGCATGGACC...CCTTGCCCTAACGCGCTTTGCTGTGAGCCTGGCCCCTGCCCAGGGCTTGGGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000527886.5
CDS-3UTR GCA 90 bp GAAAACCCACATGCACCCAAGAACAGGTGTGGACGGGGCGGCACAGAAGTCCACTCCTCCACCTTGCCCTaGCTCAGGGACTCCGGGATG +
Preference number: 4 (lower is better)
Translates to: ENPHAPKNRCGRGGTEVHSSTLP*LRDSGM
Trigger: CATCCCGGAGTCCCTGAGGCAGGGCAAGGTGGAGGA...GTGGACTTCTGTGCCGCCCCGTCCACACCTGTTCTTGGGTGCATGTGGGTTTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
ENST00000530506.5
CDS-3UTR GCA 90 bp CGGGTGCTCTTTCACGGGAATCTTGTTGGGACAGCATTCCTTGGGGAGCGCCGGACTTGTCCTCCACCTTaGCCTGCCTCAGGGACTCCG +
Preference number: 4 (lower is better)
Translates to: RVLFHGNLVGTAFLGERRTCPPP*PASGTP
Trigger: CGGAGTCCCTGAGGCAGGGCAAGGTGGAGGACAAGT...CCGGCGCTCCCCAAGGAATGCTGTCCCAACAAGATTCCCGTGAAAGAGCACCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
ENST00000530506.5
CDS-3UTR GCA 90 bp ATCCTTGTTCCCTCGCTGGGCTTCCAGCACGGAGCGGATCACCTCCTGGTCCATACTTGTCCTCCACCTTaGCCTGCCTCAGGGACTCCG +
Preference number: 4 (lower is better)
Translates to: ILVPSLGFQHGADHLLVHTCPPP*PASGTP
Trigger: CGGAGTCCCTGAGGCAGGGCAAGGTGGAGGACAAGT...ATGGACCAGGAGGTGATCCGCTCCGTGCTGGAAGCCCAGCGAGGGAACAAGGAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530506.5
CDS-3UTR GCA 90 bp GAAAACCCACATGCACCCAAGAACAGGTGTGGACGGGGCGGCACAGAAGTCCACGGCTCCTCCCCCATCTaGAGCAGGGAGTTGATGGCG +
Preference number: 4 (lower is better)
Translates to: ENPHAPKNRCGRGGTEVHGSSPI*SRELMA
Trigger: CGCCATCAACTCCCTGCTGCAGATGGGGGAGGAGCC...GTGGACTTCTGTGCCGCCCCGTCCACACCTGTTCTTGGGTGCATGTGGGTTTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
ENST00000530506.5
CDS-3UTR GCA 90 bp CCTCTCACCCCAGCCTCGCAAGGCCTGTTGAGAAGAGAAGCTCCCTGGGAGGACAGGGGGCGACACGGGTaGTCTTTCACGGGAATCTTG +
Preference number: 4 (lower is better)
Translates to: PLTPASQGLLRREAPWEDRGRHG*SFTGIL
Trigger: CAAGATTCCCGTGAAAGAGCACCCGTGTCGCCCCCT...GTCCTCCCAGGGAGCTTCTCTTCTCAACAGGCCTTGCGAGGCTGGGGTGAGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR GCA 90 bp ACCCACATGCACCCAAGAACAGGTGTGGACGGGGCGGCACAGAAGTCCACGGGAAGGGGGCGACACGGGTaGTCTTTCACGGGAATCTTG +
Preference number: 4 (lower is better)
Translates to: THMHPRTGVDGAAQKSTGRGRHG*SFTGIL
Trigger: CAAGATTCCCGTGAAAGAGCACCCGTGTCGCCCCCT...TCCCGTGGACTTCTGTGCCGCCCCGTCCACACCTGTTCTTGGGTGCATGTGGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
ENST00000530506.5
CDS-3UTR GCA 90 bp CCACATGCACCCAAGAACAGGTGTGGACGGGGCGGCACAGAAGTCCACGGGAGGGGTGTGGGTTCATTCTaGCTTCAGGCCGGAGTCTGT +
Preference number: 4 (lower is better)
Translates to: PHAPKNRCGRGGTEVHGRGVGSF*LQAGVC
Trigger: ACAGACTCCGGCCTGAAGGCAGAATGAACCCACACC...CCTCCCGTGGACTTCTGTGCCGCCCCGTCCACACCTGTTCTTGGGTGCATGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR GCA 90 bp TCCGGCGACCTGTCTTCTATCTCCGGAGCCCCGCCTGAGGCTCCAAGATGGCACGGTGTGGGTTCATTCTaGCTTCAGGCCGGAGTCTGT +
Preference number: 4 (lower is better)
Translates to: SGDLSSISGAPPEAPRWHGVGSF*LQAGVC
Trigger: ACAGACTCCGGCCTGAAGGCAGAATGAACCCACACC...GTGCCATCTTGGAGCCTCAGGCGGGGCTCCGGAGATAGAAGACAGGTCGCCGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR GCA 90 bp GCGACACGGGTGCTCTTTCACGGGAATCTTGTTGGGACAGCATTCCTTGGGGAGGAGCCTGGCCAACCGTaGCAGGCCCCCTTCCTCACT +
Preference number: 4 (lower is better)
Translates to: ATRVLFHGNLVGTAFLGEEPGQP*QAPFLT
Trigger: AGTGAGGAAGGGGGCCTGGCACGGTTGGCCAGGCTC...CTCCCCAAGGAATGCTGTCCCAACAAGATTCCCGTGAAAGAGCACCCGTGTCGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR GCA 90 bp GAAAACCCACATGCACCCAAGAACAGGTGTGGACGGGGCGGCACAGAAGTCCACGGACCCGGCTTCAGATaGCCGCTGGCTGGCAATCAG +
Preference number: 4 (lower is better)
Translates to: ENPHAPKNRCGRGGTEVHGPGFR*PLAGNQ
Trigger: CTGATTGCCAGCCAGCGGGCATCTGAAGCCGGGTCC...GTGGACTTCTGTGCCGCCCCGTCCACACCTGTTCTTGGGTGCATGTGGGTTTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR GCA 90 bp CGCACGTCCCAGGGACAGGAGAGCGCGCTGAGACCTCCCAGCACGAGATGGGAGAATCATGCACAGTGCTaGCTCTATCACCTCTCACCC +
Preference number: 4 (lower is better)
Translates to: RTSQGQESALRPPSTRWENHAQC*LYHLSP
Trigger: GGGTGAGAGGTGATAGAGGCAGCACTGTGCATGATT...CTCCCATCTCGTGCTGGGAGGTCTCAGCGCGCTCTCCTGTCCCTGGGACGTGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR GCA 90 bp AAAACCCACATGCACCCAAGAACAGGTGTGGACGGGGCGGCACAGAAGTCCACGGCAGTCGGCTGGCAGTaGCACCACACCCTCTCGGAA +
Preference number: 4 (lower is better)
Translates to: KTHMHPRTGVDGAAQKSTAVGWQ*HHTLSE
Trigger: TTCCGAGAGGGTGTGGTGGCACTGCCAGCCGACTGC...CGTGGACTTCTGTGCCGCCCCGTCCACACCTGTTCTTGGGTGCATGTGGGTTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR GCA 90 bp GTTGATGGCGGCATCCTTGTTCCCTCGCTGGGCTTCCAGCACGGAGCGGATCACATGCGGAGGAAGTCCTaGGGGAGCTCACCGATGTAC +
Preference number: 4 (lower is better)
Translates to: VDGGILVPSLGFQHGADHMRRKS*GSSPMY
Trigger: GTACATCGGTGAGCTCCCGCAGGACTTCCTCCGCAT...GTGATCCGCTCCGTGCTGGAAGCCCAGCGAGGGAACAAGGATGCCGCCATCAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527938.5
CDS-3UTR GCA 90 bp TTAGTGACCGCTGCCACGGAGCTGGCGATCGGCCTGCATCTTCAAACCCAGGAGGTGTGGCAGTCTCACTaGACCCCAGCAACGCGAAGG +
Preference number: 4 (lower is better)
Translates to: LVTAATELAIGLHLQTQEVWQSH*TPATRR
Trigger: CCTTCGCGTTGCTGGGGTGCAGTGAGACTGCCACAC...CTCCTGGGTTTGAAGATGCAGGCCGATCGCCAGCTCCGTGGCAGCGGTCACTAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR GCA 90 bp CCTCTCACCCCAGCCTCGCAAGGCCTGTTGAGAAGAGAAGCTCCCTGGGAGGACCCACAGAGCCACATGTaGACGCGTGTGGCAGTCTCA +
Preference number: 4 (lower is better)
Translates to: PLTPASQGLLRREAPWEDPQSHM*TRVAVS
Trigger: TGAGACTGCCACACGCGTGCACATGTGGCTCTGTGG...GTCCTCCCAGGGAGCTTCTCTTCTCAACAGGCCTTGCGAGGCTGGGGTGAGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR GCA 90 bp TCCCCCATCTGCAGCAGGGAGTTGATGGCGGCATCCTTGTTCCCTCGCTGGGCTCTTATTGGAAACGCATaGCTGGGCATGGGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: SPICSRELMAASLFPRWALIGNA*LGMGAG
Trigger: CCCAGCCCCCATGCCCAGGCATGCGTTTCCAATAAG...AGCCCAGCGAGGGAACAAGGATGCCGCCATCAACTCCCTGCTGCAGATGGGGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000530506.5
CDS-3UTR GCA 90 bp TGTCAGCTTCATCTAGATGGCCGTACTGTGCCAGGGACGCCCCTGCTTATTGGACCCCGGCCTGGATGCTaGGGACTCAGACGGGCTCCA +
Preference number: 4 (lower is better)
Translates to: CQLHLDGRTVPGTPLLIGPRPGC*GLRRAP
Trigger: TGGAGCCCGTCTGAGTCCGCAGCATCCAGGCCGGGG...TCCAATAAGCAGGGGCGTCCCTGGCACAGTACGGCCATCTAGATGAAGCTGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530506.5
CDS-3UTR CCA 90 bp TCTTTCACGGGAATCTTGTTGGGACAGCATTCCTTGGGGAGCGCCGGGTCGGCGGAAAGAGTCCACGCCTaGGGGCACCGTGCAGTGGAT +
Preference number: 4 (lower is better)
Translates to: SFTGILLGQHSLGSAGSAERVHA*GHRAVD
Trigger: ATCCACTGCACGGTGCCCCCAGGCGTGGACTCTTTC...CGCCGACCCGGCGCTCCCCAAGGAATGCTGTCCCAACAAGATTCCCGTGAAAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000527886.5
ENST00000530506.5
CDS-3UTR CCA 90 bp CCCACATGCACCCAAGAACAGGTGTGGACGGGGCGGCACAGAAGTCCACGGGAGCATCACCATGGCAGCTaGAAGCAGCGCGTAGGACAT +
Preference number: 4 (lower is better)
Translates to: PTCTQEQVWTGRHRSPREHHHGS*KQRVGH
Trigger: ATGTCCTACGCGCTGCTTCCAGCTGCCATGGTGATG...CTCCCGTGGACTTCTGTGCCGCCCCGTCCACACCTGTTCTTGGGTGCATGTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
ENST00000530506.5
CDS-3UTR CCA 90 bp GGGGGCGACACGGGTGCTCTTTCACGGGAATCTTGTTGGGACAGCATTCCTTGGGGGGTGGCATCACCATaGCAGCTGGAAGCAGCGCGT +
Preference number: 4 (lower is better)
Translates to: GGDTGALSRESCWDSIPWGVASP*QLEAAR
Trigger: ACGCGCTGCTTCCAGCTGCCATGGTGATGCCACCCC...CCAAGGAATGCTGTCCCAACAAGATTCCCGTGAAAGAGCACCCGTGTCGCCCCC
61% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 5 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
ENST00000530506.5
CDS-3UTR CCA 90 bp CGGGTGCTCTTTCACGGGAATCTTGTTGGGACAGCATTCCTTGGGGAGCGCCGGATCAGGACCACGGGCTaGGGTGGCATCACCATGGCA +
Preference number: 4 (lower is better)
Translates to: RVLFHGNLVGTAFLGERRIRTTG*GGITMA
Trigger: TGCCATGGTGATGCCACCCCAGCCCGTGGTCCTGAT...CCGGCGCTCCCCAAGGAATGCTGTCCCAACAAGATTCCCGTGAAAGAGCACCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
ENST00000530506.5
CDS-3UTR CCA 90 bp CGCCCCGTCCTGGACCGCCAGGAACCGAAAACCCACATGCACCCAAGAACAGGTCTGCTGGTACACTGTTaGCATCAGGACCACGGGCTG +
Preference number: 4 (lower is better)
Translates to: RPVLDRQEPKTHMHPRTGLLVHC*HQDHGL
Trigger: CAGCCCGTGGTCCTGATGCCAACAGTGTACCAGCAG...ACCTGTTCTTGGGTGCATGTGGGTTTTCGGTTCCTGGCGGTCCAGGACGGGGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
ENST00000530506.5
CDS-3UTR CCA 90 bp GACCGCCAGGAACCGAAAACCCACATGCACCCAAGAACAGGTGTGGACGGGGCGCTGCTGGTACACTGTTaGCATCAGGACCACGGGCTG +
Preference number: 4 (lower is better)
Translates to: DRQEPKTHMHPRTGVDGALLVHC*HQDHGL
Trigger: CAGCCCGTGGTCCTGATGCCAACAGTGTACCAGCAG...CGCCCCGTCCACACCTGTTCTTGGGTGCATGTGGGTTTTCGGTTCCTGGCGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
ENST00000530506.5
CDS-3UTR CCA 90 bp TTGTTGGGACAGCATTCCTTGGGGAGCGCCGGGTCGGCGTGTCCAAAGAGCGGGGGAACATGTCCTGGATaGCTTTCAGGTCCTCCTCGC +
Preference number: 4 (lower is better)
Translates to: LLGQHSLGSAGSACPKSGGTCPG*LSGPPR
Trigger: GCGAGGAGGACCTGAAAGCCATCCAGGACATGTTCC...CCCGCTCTTTGGACACGCCGACCCGGCGCTCCCCAAGGAATGCTGTCCCAACAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
ENST00000530506.5
CDS-3UTR CCA 90 bp GTTCCCTCGCTGGGCTTCCAGCACGGAGCGGATCACCTCCTGGTCCATGTTGGGGGAACATGTCCTGGATaGCTTTCAGGTCCTCCTCGC +
Preference number: 4 (lower is better)
Translates to: VPSLGFQHGADHLLVHVGGTCPG*LSGPPR
Trigger: GCGAGGAGGACCTGAAAGCCATCCAGGACATGTTCC...CCCAACATGGACCAGGAGGTGATCCGCTCCGTGCTGGAAGCCCAGCGAGGGAAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000527938.5
ENST00000530506.5
CDS-3UTR CCA 90 bp GCAGGGGCCACGTCCTCTCTAGGAGACACCCACAGAGCCACATGTGCACGCGTGCCTCCTGGTCCATGTTaGGGAACATGTCCTGGATGG +
Preference number: 4 (lower is better)
Translates to: AGATSSLGDTHRATCARVPPGPC*GTCPGW
Trigger: CCATCCAGGACATGTTCCCCAACATGGACCAGGAGG...CACGCGTGCACATGTGGCTCTGTGGGTGTCTCCTAGAGAGGACGTGGCCCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR CCA 90 bp GAACCGAAAACCCACATGCACCCAAGAACAGGTGTGGACGGGGCGGCACAGAAGTCCTTGTTCCCTCGCTaGGCTTCCAGCACGGAGCGG +
Preference number: 4 (lower is better)
Translates to: EPKTHMHPRTGVDGAAQKSLFPR*ASSTER
Trigger: CCGCTCCGTGCTGGAAGCCCAGCGAGGGAACAAGGA...CTTCTGTGCCGCCCCGTCCACACCTGTTCTTGGGTGCATGTGGGTTTTCGGTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
ENST00000530506.5
CDS-3UTR CCA 90 bp TTAGTGACCGCTGCCACGGAGCTGGCGATCGGCCTGCATCTTCAAACCCAGGAGGAGGCAGAGGCTCTATaGCTCCTCCCCCATCTGCAG +
Preference number: 4 (lower is better)
Translates to: LVTAATELAIGLHLQTQEEAEAL*LLPHLQ
Trigger: CTGCAGATGGGGGAGGAGCCATAGAGCCTCTGCCTC...CTCCTGGGTTTGAAGATGCAGGCCGATCGCCAGCTCCGTGGCAGCGGTCACTAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR CCA 90 bp CGGGTGCTCTTTCACGGGAATCTTGTTGGGACAGCATTCCTTGGGGAGCGCCGGGAGGCAGAGGCTCTATaGCTCCTCCCCCATCTGCAG +
Preference number: 4 (lower is better)
Translates to: RVLFHGNLVGTAFLGERREAEAL*LLPHLQ
Trigger: CTGCAGATGGGGGAGGAGCCATAGAGCCTCTGCCTC...CCGGCGCTCCCCAAGGAATGCTGTCCCAACAAGATTCCCGTGAAAGAGCACCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
ENST00000530506.5
CDS-3UTR CCA 90 bp TGGACGGGGCGGCACAGAAGTCCACGGGAGGGGGCGACACGGGTGCTCTTTCACTCACGGGAATCTTGTTaGGACAGCATTCCTTGGGGA +
Preference number: 4 (lower is better)
Translates to: WTGRHRSPREGATRVLFHSRESC*DSIPWG
Trigger: TCCCCAAGGAATGCTGTCCCAACAAGATTCCCGTGA...GTGAAAGAGCACCCGTGTCGCCCCCTCCCGTGGACTTCTGTGCCGCCCCGTCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
ENST00000530506.5
CDS-3UTR CCA 90 bp GTCAGGCTGTCCTTAGTGACCGCTGCCACGGAGCTGGCGATCGGCCTGCATCTTACCCAAGAACAGGTGTaGACGGGGCGGCACAGAAGT +
Preference number: 4 (lower is better)
Translates to: VRLSLVTAATELAIGLHLTQEQV*TGRHRS
Trigger: ACTTCTGTGCCGCCCCGTCCACACCTGTTCTTGGGT...AAGATGCAGGCCGATCGCCAGCTCCGTGGCAGCGGTCACTAAGGACAGCCTGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR CCA 90 bp ACCCACATGCACCCAAGAACAGGTGTGGACGGGGCGGCACAGAAGTCCACGGGACCACCTCCAACACCCTaGCAGAAGCAGCTGCTCTCT +
Preference number: 4 (lower is better)
Translates to: THMHPRTGVDGAAQKSTGPPPTP*QKQLLS
Trigger: AGAGAGCAGCTGCTTCTGCCAGGGTGTTGGAGGTGG...TCCCGTGGACTTCTGTGCCGCCCCGTCCACACCTGTTCTTGGGTGCATGTGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR CCA 90 bp GGTGTGGACGGGGCGGCACAGAAGTCCACGGGAGGGGGCGACACGGGTGCTCTTACAAAATGCCATGAATaGAATCGGAAGGCGCTCCAC +
Preference number: 4 (lower is better)
Translates to: GVDGAAQKSTGGGDTGALTKCHE*NRKALH
Trigger: GTGGAGCGCCTTCCGATTCCATTCATGGCATTTTGT...AAGAGCACCCGTGTCGCCCCCTCCCGTGGACTTCTGTGCCGCCCCGTCCACACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR CCA 90 bp GAACCGAAAACCCACATGCACCCAAGAACAGGTGTGGACGGGGCGGCACAGAAGCAGATGCCCGCTGGCTaGCAATCAGGCAGAGCCTGG +
Preference number: 4 (lower is better)
Translates to: EPKTHMHPRTGVDGAAQKQMPAG*QSGRAW
Trigger: CCAGGCTCTGCCTGATTGCCAGCCAGCGGGCATCTG...CTTCTGTGCCGCCCCGTCCACACCTGTTCTTGGGTGCATGTGGGTTTTCGGTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR CCA 90 bp CCCCTTCCTCACTCCAGGTGTGGGTTCATTCTGCCTTCAGGCCGGAGTCTGTCACAGATGCCCGCTGGCTaGCAATCAGGCAGAGCCTGG +
Preference number: 4 (lower is better)
Translates to: PLPHSRCGFILPSGRSLSQMPAG*QSGRAW
Trigger: CCAGGCTCTGCCTGATTGCCAGCCAGCGGGCATCTG...TGACAGACTCCGGCCTGAAGGCAGAATGAACCCACACCTGGAGTGAGGAAGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR CCA 90 bp CTCTTTCACGGGAATCTTGTTGGGACAGCATTCCTTGGGGAGCGCCGGGTCGGCGCTTCAGATGCCCGCTaGCTGGCAATCAGGCAGAGC +
Preference number: 4 (lower is better)
Translates to: LFHGNLVGTAFLGERRVGASDAR*LAIRQS
Trigger: GCTCTGCCTGATTGCCAGCCAGCGGGCATCTGAAGC...GCCGACCCGGCGCTCCCCAAGGAATGCTGTCCCAACAAGATTCCCGTGAAAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR CCA 90 bp GAACCGAAAACCCACATGCACCCAAGAACAGGTGTGGACGGGGCGGCACAGAAGGCTGAACCCACGTCCTaGGCACAGCAGCTCCCAAGC +
Preference number: 4 (lower is better)
Translates to: EPKTHMHPRTGVDGAAQKAEPTS*AQQLPS
Trigger: GCTTGGGAGCTGCTGTGCCCAGGACGTGGGTTCAGC...CTTCTGTGCCGCCCCGTCCACACCTGTTCTTGGGTGCATGTGGGTTTTCGGTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR CCA 90 bp GACCGCCAGGAACCGAAAACCCACATGCACCCAAGAACAGGTGTGGACGGGGCGTCATGCAACTGCTCTTaGCAAGGCAGCTCCCACGCC +
Preference number: 4 (lower is better)
Translates to: DRQEPKTHMHPRTGVDGASCNCS*QGSSHA
Trigger: GGCGTGGGAGCTGCCTTGCCAAGAGCAGTTGCATGA...CGCCCCGTCCACACCTGTTCTTGGGTGCATGTGGGTTTTCGGTTCCTGGCGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527886.5
CDS-3UTR CCA 90 bp AAAACCCACATGCACCCAAGAACAGGTGTGGACGGGGCGGCACAGAAGTCCACGTTGGAAACGCATGCCTaGGCATGGGGGCTGGGGGCT +
Preference number: 4 (lower is better)
Translates to: KTHMHPRTGVDGAAQKSTLETHA*AWGLGA
Trigger: AGCCCCCAGCCCCCATGCCCAGGCATGCGTTTCCAA...CGTGGACTTCTGTGCCGCCCCGTCCACACCTGTTCTTGGGTGCATGTGGGTTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000530506.5
3UTR CAA 72 bp TGCTCTTTCACGGGAATCTTGTTGGGACAGCATTCCTaGGGGAGCGCCGGGTCGGCGTGTCCAAAGAGCGGG +
Preference number: 4 (lower is better)
Translates to: CSFTGILLGQHS*GSAGSACPKSG
Trigger: CCCGCTCTTTGGACACGCCGACCCGGCGCTCCCCAAGGAATGCTGTCCCAACAAGATTCCCGTGAAAGAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
ENST00000530506.5
CDS-3UTR TCA 90 bp TCCCAGGGGCCCCTCCGTCTGAGTGGTCGGCGTCTGCTGAACAAATACCATGTCTCTGCAGCAGGGAGTTaGTGGCGGCATCCTTGTTCC +
Preference number: 4 (lower is better)
Translates to: SQGPLRLSGRRLLNKYHVSAAGS*WRHPCS
Trigger: GGAACAAGGATGCCGCCATCAACTCCCTGCTGCAGA...GACATGGTATTTGTTCAGCAGACGCCGACCACTCAGACGGAGGGGCCCCTGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR TCA 90 bp ATCCTTGTTCCCTCGCTGGGCTTCCAGCACGGAGCGGATCACCTCCTGGTCCATTCTGCAGCAGGGAGTTaGTGGCGGCATCCTTGTTCC +
Preference number: 4 (lower is better)
Translates to: ILVPSLGFQHGADHLLVHSAAGS*WRHPCS
Trigger: GGAACAAGGATGCCGCCATCAACTCCCTGCTGCAGA...ATGGACCAGGAGGTGATCCGCTCCGTGCTGGAAGCCCAGCGAGGGAACAAGGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527938.5
ENST00000530506.5
CDS-3UTR TCA 90 bp TCTTTCACGGGAATCTTGTTGGGACAGCATTCCTTGGGGAGCGCCGGGTCGGCGTCTGCAGCAGGGAGTTaGTGGCGGCATCCTTGTTCC +
Preference number: 4 (lower is better)
Translates to: SFTGILLGQHSLGSAGSASAAGS*WRHPCS
Trigger: GGAACAAGGATGCCGCCATCAACTCCCTGCTGCAGA...CGCCGACCCGGCGCTCCCCAAGGAATGCTGTCCCAACAAGATTCCCGTGAAAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
ENST00000530506.5
CDS-3UTR TCA 90 bp GCGACACGGGTGCTCTTTCACGGGAATCTTGTTGGGACAGCATTCCTTGGGGAGGACAGGAGAGCGCGCTaGGACCTCCCAGCACGAGAT +
Preference number: 4 (lower is better)
Translates to: ATRVLFHGNLVGTAFLGEDRRAR*DLPARD
Trigger: ATCTCGTGCTGGGAGGTCTCAGCGCGCTCTCCTGTC...CTCCCCAAGGAATGCTGTCCCAACAAGATTCCCGTGAAAGAGCACCCGTGTCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR TCA 90 bp TTGTTGGGACAGCATTCCTTGGGGAGCGCCGGGTCGGCGTGTCCAAAGAGCGGGTTTTCCAGAACGGCATaGGAAGGAGAGACGCACGTC +
Preference number: 4 (lower is better)
Translates to: LLGQHSLGSAGSACPKSGFSRTA*EGETHV
Trigger: GACGTGCGTCTCTCCTTCTCATGCCGTTCTGGAAAA...CCCGCTCTTTGGACACGCCGACCCGGCGCTCCCCAAGGAATGCTGTCCCAACAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR TCA 90 bp GGGACAGCATTCCTTGGGGAGCGCCGGGTCGGCGTGTCCAAAGAGCGGGGGCAACATCACAAAATGCCATaGATGGAATCGGAAGGCGCT +
Preference number: 4 (lower is better)
Translates to: GTAFLGERRVGVSKERGQHHKMP*MESEGA
Trigger: AGCGCCTTCCGATTCCATTCATGGCATTTTGTGATG...TTGCCCCCGCTCTTTGGACACGCCGACCCGGCGCTCCCCAAGGAATGCTGTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR TCA 90 bp ACAGCAGCTCCCAAGCTGTCAGCAGTCGGCTGGCAGTGCCACCACACCCTCTCGGTTAGGGCAAGGGCGTaGGTTTTCGTCTGGGAAGTT +
Preference number: 4 (lower is better)
Translates to: TAAPKLSAVGWQCHHTLSVRARA*VFVWEV
Trigger: AACTTCCCAGACGAAAACTCACGCCCTTGCCCTAAC...CGAGAGGGTGTGGTGGCACTGCCAGCCGACTGCTGACAGCTTGGGAGCTGCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR TCA 90 bp ACGGGAGGGGGCGACACGGGTGCTCTTTCACGGGAATCTTGTTGGGACAGCATTCCTCGCAAGGCCTGTTaGGAAGAGAAGCTCCCTGGG +
Preference number: 4 (lower is better)
Translates to: TGGGDTGALSRESCWDSIPRKAC*EEKLPG
Trigger: CCCAGGGAGCTTCTCTTCTCAACAGGCCTTGCGAGG...AATGCTGTCCCAACAAGATTCCCGTGAAAGAGCACCCGTGTCGCCCCCTCCCGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR TCA 90 bp CCCCTTCCTCACTCCAGGTGTGGGTTCATTCTGCCTTCAGGCCGGAGTCTGTCACCTCGCAAGGCCTGTTaGGAAGAGAAGCTCCCTGGG +
Preference number: 4 (lower is better)
Translates to: PLPHSRCGFILPSGRSLSPRKAC*EEKLPG
Trigger: CCCAGGGAGCTTCTCTTCTCAACAGGCCTTGCGAGG...TGACAGACTCCGGCCTGAAGGCAGAATGAACCCACACCTGGAGTGAGGAAGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR TCA 90 bp GAGGGGGCGACACGGGTGCTCTTTCACGGGAATCTTGTTGGGACAGCATTCCTTTTTCCTCGCCCACGCTaGACCCACGTCCTGGGCACA +
Preference number: 4 (lower is better)
Translates to: EGATRVLFHGNLVGTAFLFPRPR*THVLGT
Trigger: TGTGCCCAGGACGTGGGTTCAGCGTGGGCGAGGAAA...AAGGAATGCTGTCCCAACAAGATTCCCGTGAAAGAGCACCCGTGTCGCCCCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR TCA 90 bp AGGCAGTCAGAGGTAAGTGAGCGCCTCCCGCCTCAGAAAGCTTTTACAGGGCCATTTCCTCGCCCACGCTaGACCCACGTCCTGGGCACA +
Preference number: 4 (lower is better)
Translates to: RQSEVSERLPPQKAFTGPFPRPR*THVLGT
Trigger: TGTGCCCAGGACGTGGGTTCAGCGTGGGCGAGGAAA...TGGCCCTGTAAAAGCTTTCTGAGGCGGGAGGCGCTCACTTACCTCTGACTGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR TCA 90 bp ACGGGAGGGGGCGACACGGGTGCTCTTTCACGGGAATCTTGTTGGGACAGCATTGCAGTCAGAGGTAAGTaGGCGCCTCCCGCCTCAGAA +
Preference number: 4 (lower is better)
Translates to: TGGGDTGALSRESCWDSIAVRGK*APPASE
Trigger: TTCTGAGGCGGGAGGCGCTCACTTACCTCTGACTGC...AATGCTGTCCCAACAAGATTCCCGTGAAAGAGCACCCGTGTCGCCCCCTCCCGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR TCA 90 bp AAAACCCACATGCACCCAAGAACAGGTGTGGACGGGGCGGCACAGAAGTCCACGTGCAGCCTCCCCTTGTaGGCTGGCAGACAAGCCTGT +
Preference number: 4 (lower is better)
Translates to: KTHMHPRTGVDGAAQKSTCSLPL*AGRQAC
Trigger: ACAGGCTTGTCTGCCAGCTCACAAGGGGAGGCTGCA...CGTGGACTTCTGTGCCGCCCCGTCCACACCTGTTCTTGGGTGCATGTGGGTTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR TCA 90 bp AAAACCCACATGCACCCAAGAACAGGTGTGGACGGGGCGGCACAGAAGTCCACGCAGAAGCGCACGTTCTaGGACCACTCCTGCCTGGCA +
Preference number: 4 (lower is better)
Translates to: KTHMHPRTGVDGAAQKSTQKRTF*DHSCLA
Trigger: TGCCAGGCAGGAGTGGTCTCAGAACGTGCGCTTCTG...CGTGGACTTCTGTGCCGCCCCGTCCACACCTGTTCTTGGGTGCATGTGGGTTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR GCA 90 bp CCTTGTTCCCTCGCTGGGCTTCCAGCACGGAGCGGATCACCTCCTGGTCCATGTGGCAGTAGGGGTCCATaGGGGTCATGCCGTAATTCT +
Preference number: 4 (lower is better)
Translates to: PCSLAGLPARSGSPPGPCGSRGP*GSCRNS
Trigger: AGAATTACGGCATGACCCGCATGGACCCCTACTGCC...ACATGGACCAGGAGGTGATCCGCTCCGTGCTGGAAGCCCAGCGAGGGAACAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530506.5
CDS-3UTR GCA 90 bp TCTTTCACGGGAATCTTGTTGGGACAGCATTCCTTGGGGAGCGCCGGGTCGGCGTGTGGGTCCAGGCAATaGGGTCGTCCATGGAGAAGG +
Preference number: 4 (lower is better)
Translates to: SFTGILLGQHSLGSAGSACGSRQ*GRPWRR
Trigger: CCTTCTCCATGGACGACCGCATTGCCTGGACCCACA...CGCCGACCCGGCGCTCCCCAAGGAATGCTGTCCCAACAAGATTCCCGTGAAAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
ENST00000530506.5
CDS-3UTR GCA 90 bp GAAAACCCACATGCACCCAAGAACAGGTGTGGACGGGGCGGCACAGAAGTCCACACTTGTCCTCCACCTTaGCCTGCCTCAGGGACTCCG +
Preference number: 4 (lower is better)
Translates to: ENPHAPKNRCGRGGTEVHTCPPP*PASGTP
Trigger: CGGAGTCCCTGAGGCAGGGCAAGGTGGAGGACAAGT...GTGGACTTCTGTGCCGCCCCGTCCACACCTGTTCTTGGGTGCATGTGGGTTTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
ENST00000530506.5
CDS-3UTR GCA 90 bp CCCACATGCACCCAAGAACAGGTGTGGACGGGGCGGCACAGAAGTCCACGGGAGCCTGGCAGAAGCAGCTaGTCTCTACAGCAAGAGCAT +
Preference number: 4 (lower is better)
Translates to: PTCTQEQVWTGRHRSPREPGRSS*SLQQEH
Trigger: ATGCTCTTGCTGTAGAGAGCAGCTGCTTCTGCCAGG...CTCCCGTGGACTTCTGTGCCGCCCCGTCCACACCTGTTCTTGGGTGCATGTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR GCA 90 bp GCAGGGGCCACGTCCTCTCTAGGAGACACCCACAGAGCCACATGTGCACGCGTGCCTGGCAGAAGCAGCTaGTCTCTACAGCAAGAGCAT +
Preference number: 4 (lower is better)
Translates to: AGATSSLGDTHRATCARVPGRSS*SLQQEH
Trigger: ATGCTCTTGCTGTAGAGAGCAGCTGCTTCTGCCAGG...CACGCGTGCACATGTGGCTCTGTGGGTGTCTCCTAGAGAGGACGTGGCCCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR GCA 90 bp GACCGCCAGGAACCGAAAACCCACATGCACCCAAGAACAGGTGTGGACGGGGCGCCATCCACAGGAAGCTaGTCAGCTCACCAGACCCAA +
Preference number: 4 (lower is better)
Translates to: DRQEPKTHMHPRTGVDGAPSTGS*SAHQTQ
Trigger: TTGGGTCTGGTGAGCTGAGCAGCTTCCTGTGGATGG...CGCCCCGTCCACACCTGTTCTTGGGTGCATGTGGGTTTTCGGTTCCTGGCGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR GCA 90 bp GTCAGGCTGTCCTTAGTGACCGCTGCCACGGAGCTGGCGATCGGCCTGCATCTTGGTGTGGGTTCATTCTaGCTTCAGGCCGGAGTCTGT +
Preference number: 4 (lower is better)
Translates to: VRLSLVTAATELAIGLHLGVGSF*LQAGVC
Trigger: ACAGACTCCGGCCTGAAGGCAGAATGAACCCACACC...AAGATGCAGGCCGATCGCCAGCTCCGTGGCAGCGGTCACTAAGGACAGCCTGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR GCA 90 bp TGGACGGGGCGGCACAGAAGTCCACGGGAGGGGGCGACACGGGTGCTCTTTCACCACAAACACCAGACATaGAGGTGTCTCAATGGCATG +
Preference number: 4 (lower is better)
Translates to: WTGRHRSPREGATRVLFHHKHQT*RCLNGM
Trigger: CATGCCATTGAGACACCTGCATGTCTGGTGTTTGTG...GTGAAAGAGCACCCGTGTCGCCCCCTCCCGTGGACTTCTGTGCCGCCCCGTCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR CCA 90 bp AGGCAGTCAGAGGTAAGTGAGCGCCTCCCGCCTCAGAAAGCTTTTACAGGGCCACGCCATTGTGTGCCGTaGGCGTCTCGTACACCGCGT +
Preference number: 4 (lower is better)
Translates to: RQSEVSERLPPQKAFTGPRHCVP*ASRTPR
Trigger: ACGCGGTGTACGAGACGCCCACGGCACACAATGGCG...TGGCCCTGTAAAAGCTTTCTGAGGCGGGAGGCGCTCACTTACCTCTGACTGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000527886.5
CDS-3UTR CCA 90 bp GAACCGAAAACCCACATGCACCCAAGAACAGGTGTGGACGGGGCGGCACAGAAGTCCAGCGGGGATTCTTaGCGCCATTGTGTGCCGTGG +
Preference number: 4 (lower is better)
Translates to: EPKTHMHPRTGVDGAAQKSSGDS*RHCVPW
Trigger: CCACGGCACACAATGGCGCCAAGAATCCCCGCTGGA...CTTCTGTGCCGCCCCGTCCACACCTGTTCTTGGGTGCATGTGGGTTTTCGGTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000527886.5
ENST00000530506.5
CDS-3UTR CCA 90 bp CCCCTTCCTCACTCCAGGTGTGGGTTCATTCTGCCTTCAGGCCGGAGTCTGTCAGGGGGCACCGTGCAGTaGATGACCTTATTCCAGCGG +
Preference number: 4 (lower is better)
Translates to: PLPHSRCGFILPSGRSLSGGTVQ*MTLFQR
Trigger: CCGCTGGAATAAGGTCATCCACTGCACGGTGCCCCC...TGACAGACTCCGGCCTGAAGGCAGAATGAACCCACACCTGGAGTGAGGAAGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000527886.5
CDS-3UTR CCA 90 bp CGTCAGTGTCAGCTTCATCTAGATGGCCGTACTGTGCCAGGGACGCCCCTGCTTGAAAGAGTCCACGCCTaGGGGCACCGTGCAGTGGAT +
Preference number: 4 (lower is better)
Translates to: RQCQLHLDGRTVPGTPLLERVHA*GHRAVD
Trigger: ATCCACTGCACGGTGCCCCCAGGCGTGGACTCTTTC...AAGCAGGGGCGTCCCTGGCACAGTACGGCCATCTAGATGAAGCTGACACTGACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530506.5
CDS-3UTR CCA 90 bp TTGTTGGGACAGCATTCCTTGGGGAGCGCCGGGTCGGCGTGTCCAAAGAGCGGGCAATGCGGTCGTCCATaGAGAAGGCTCTCTCATCGA +
Preference number: 4 (lower is better)
Translates to: LLGQHSLGSAGSACPKSGQCGRP*RRLSHR
Trigger: TCGATGAGAGAGCCTTCTCCATGGACGACCGCATTG...CCCGCTCTTTGGACACGCCGACCCGGCGCTCCCCAAGGAATGCTGTCCCAACAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000527886.5
ENST00000530506.5
CDS-3UTR CCA 90 bp AGGCAGTCAGAGGTAAGTGAGCGCCTCCCGCCTCAGAAAGCTTTTACAGGGCCAGGGGTGGCATCACCATaGCAGCTGGAAGCAGCGCGT +
Preference number: 4 (lower is better)
Translates to: RQSEVSERLPPQKAFTGPGVASP*QLEAAR
Trigger: ACGCGCTGCTTCCAGCTGCCATGGTGATGCCACCCC...TGGCCCTGTAAAAGCTTTCTGAGGCGGGAGGCGCTCACTTACCTCTGACTGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR CCA 90 bp CCCCTTCCTCACTCCAGGTGTGGGTTCATTCTGCCTTCAGGCCGGAGTCTGTCAATCAGGACCACGGGCTaGGGTGGCATCACCATGGCA +
Preference number: 4 (lower is better)
Translates to: PLPHSRCGFILPSGRSLSIRTTG*GGITMA
Trigger: TGCCATGGTGATGCCACCCCAGCCCGTGGTCCTGAT...TGACAGACTCCGGCCTGAAGGCAGAATGAACCCACACCTGGAGTGAGGAAGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR CCA 90 bp GGGGGCGACACGGGTGCTCTTTCACGGGAATCTTGTTGGGACAGCATTCCTTGGATCAGGACCACGGGCTaGGGTGGCATCACCATGGCA +
Preference number: 4 (lower is better)
Translates to: GGDTGALSRESCWDSIPWIRTTG*GGITMA
Trigger: TGCCATGGTGATGCCACCCCAGCCCGTGGTCCTGAT...CCAAGGAATGCTGTCCCAACAAGATTCCCGTGAAAGAGCACCCGTGTCGCCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
ENST00000530506.5
CDS-3UTR CCA 90 bp TCCCCCATCTGCAGCAGGGAGTTGATGGCGGCATCCTTGTTCCCTCGCTGGGCTGGAACATGTCCTGGATaGCTTTCAGGTCCTCCTCGC +
Preference number: 4 (lower is better)
Translates to: SPICSRELMAASLFPRWAGTCPG*LSGPPR
Trigger: GCGAGGAGGACCTGAAAGCCATCCAGGACATGTTCC...AGCCCAGCGAGGGAACAAGGATGCCGCCATCAACTCCCTGCTGCAGATGGGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000527938.5
ENST00000530506.5
CDS-3UTR CCA 90 bp GTTCCCTCGCTGGGCTTCCAGCACGGAGCGGATCACCTCCTGGTCCATGTTGGGTTGGGGAACATGTCCTaGATGGCTTTCAGGTCCTCC +
Preference number: 4 (lower is better)
Translates to: VPSLGFQHGADHLLVHVGLGNMS*MAFRSS
Trigger: GGAGGACCTGAAAGCCATCCAGGACATGTTCCCCAA...CCCAACATGGACCAGGAGGTGATCCGCTCCGTGCTGGAAGCCCAGCGAGGGAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527938.5
ENST00000530506.5
CDS-3UTR CCA 90 bp CGCCCCGTCCTGGACCGCCAGGAACCGAAAACCCACATGCACCCAAGAACAGGTGAGCGGATCACCTCCTaGTCCATGTTGGGGAACATG +
Preference number: 4 (lower is better)
Translates to: RPVLDRQEPKTHMHPRTGERITS*SMLGNM
Trigger: CATGTTCCCCAACATGGACCAGGAGGTGATCCGCTC...ACCTGTTCTTGGGTGCATGTGGGTTTTCGGTTCCTGGCGGTCCAGGACGGGGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
ENST00000530506.5
CDS-3UTR CCA 90 bp CAAGAGCATTTTCCAGAACGGCATGAGAAGGAGAGACGCACGTCCCAGGGACAGTGGGACAGCATTCCTTaGGGAGCGCCGGGTCGGCGT +
Preference number: 4 (lower is better)
Translates to: QEHFPERHEKERRTSQGQWDSIP*GAPGRR
Trigger: ACGCCGACCCGGCGCTCCCCAAGGAATGCTGTCCCA...CTGTCCCTGGGACGTGCGTCTCTCCTTCTCATGCCGTTCTGGAAAATGCTCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR CCA 90 bp TCCCAGGGGCCCCTCCGTCTGAGTGGTCGGCGTCTGCTGAACAAATACCATGTCACCCAAGAACAGGTGTaGACGGGGCGGCACAGAAGT +
Preference number: 4 (lower is better)
Translates to: SQGPLRLSGRRLLNKYHVTQEQV*TGRHRS
Trigger: ACTTCTGTGCCGCCCCGTCCACACCTGTTCTTGGGT...GACATGGTATTTGTTCAGCAGACGCCGACCACTCAGACGGAGGGGCCCCTGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR CCA 90 bp CTCTTTCACGGGAATCTTGTTGGGACAGCATTCCTTGGGGAGCGCCGGGTCGGCACCCAAGAACAGGTGTaGACGGGGCGGCACAGAAGT +
Preference number: 4 (lower is better)
Translates to: LFHGNLVGTAFLGERRVGTQEQV*TGRHRS
Trigger: ACTTCTGTGCCGCCCCGTCCACACCTGTTCTTGGGT...GCCGACCCGGCGCTCCCCAAGGAATGCTGTCCCAACAAGATTCCCGTGAAAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
ENST00000530506.5
CDS-3UTR CCA 90 bp CTCTTTCACGGGAATCTTGTTGGGACAGCATTCCTTGGGGAGCGCCGGGTCGGCAGTCTGTCACAAGGCTaGCTGGACAGTGGCCAGGTG +
Preference number: 4 (lower is better)
Translates to: LFHGNLVGTAFLGERRVGSLSQG*LDSGQV
Trigger: CACCTGGCCACTGTCCAGCCAGCCTTGTGACAGACT...GCCGACCCGGCGCTCCCCAAGGAATGCTGTCCCAACAAGATTCCCGTGAAAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR CCA 90 bp GTCCGTTATCAGTGGGTTTACATCCGAAGGCCGGCGGCAAGACACTTGAACCACCAATCAGGCAGAGCCTaGCCAACCGTGCCAGGCCCC +
Preference number: 4 (lower is better)
Translates to: VRYQWVYIRRPAARHLNHQSGRA*PTVPGP
Trigger: GGGGCCTGGCACGGTTGGCCAGGCTCTGCCTGATTG...GTGGTTCAAGTGTCTTGCCGCCGGCCTTCGGATGTAAACCCACTGATAACGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR CCA 90 bp CTCTTTCACGGGAATCTTGTTGGGACAGCATTCCTTGGGGAGCGCCGGGTCGGCAGAAGAGAAGCTCCCTaGGAGGACACCCACGGAGCT +
Preference number: 4 (lower is better)
Translates to: LFHGNLVGTAFLGERRVGRREAP*EDTHGA
Trigger: AGCTCCGTGGGTGTCCTCCCAGGGAGCTTCTCTTCT...GCCGACCCGGCGCTCCCCAAGGAATGCTGTCCCAACAAGATTCCCGTGAAAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR CCA 90 bp TCTTTCACGGGAATCTTGTTGGGACAGCATTCCTTGGGGAGCGCCGGGTCGGCGAGAAGAGAAGCTCCCTaGGAGGACACCCACGGAGCT +
Preference number: 4 (lower is better)
Translates to: SFTGILLGQHSLGSAGSARREAP*EDTHGA
Trigger: AGCTCCGTGGGTGTCCTCCCAGGGAGCTTCTCTTCT...CGCCGACCCGGCGCTCCCCAAGGAATGCTGTCCCAACAAGATTCCCGTGAAAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR CCA 90 bp AGGCAGTCAGAGGTAAGTGAGCGCCTCCCGCCTCAGAAAGCTTTTACAGGGCCACTGTCAGCAGTCGGCTaGCAGTGCCACCACACCCTC +
Preference number: 4 (lower is better)
Translates to: RQSEVSERLPPQKAFTGPLSAVG*QCHHTL
Trigger: GAGGGTGTGGTGGCACTGCCAGCCGACTGCTGACAG...TGGCCCTGTAAAAGCTTTCTGAGGCGGGAGGCGCTCACTTACCTCTGACTGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR CCA 90 bp GCGACACGGGTGCTCTTTCACGGGAATCTTGTTGGGACAGCATTCCTTGGGGAGCTGTCAGCAGTCGGCTaGCAGTGCCACCACACCCTC +
Preference number: 4 (lower is better)
Translates to: ATRVLFHGNLVGTAFLGELSAVG*QCHHTL
Trigger: GAGGGTGTGGTGGCACTGCCAGCCGACTGCTGACAG...CTCCCCAAGGAATGCTGTCCCAACAAGATTCCCGTGAAAGAGCACCCGTGTCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR CCA 90 bp CTCTTTCACGGGAATCTTGTTGGGACAGCATTCCTTGGGGAGCGCCGGGTCGGCACATGTGCACGCGTGTaGCAGTCTCACTGCACCCCA +
Preference number: 4 (lower is better)
Translates to: LFHGNLVGTAFLGERRVGTCARV*QSHCTP
Trigger: TGGGGTGCAGTGAGACTGCCACACGCGTGCACATGT...GCCGACCCGGCGCTCCCCAAGGAATGCTGTCCCAACAAGATTCCCGTGAAAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR CCA 90 bp TTAGTGACCGCTGCCACGGAGCTGGCGATCGGCCTGCATCTTCAAACCCAGGAGACATGTGCACGCGTGTaGCAGTCTCACTGCACCCCA +
Preference number: 4 (lower is better)
Translates to: LVTAATELAIGLHLQTQETCARV*QSHCTP
Trigger: TGGGGTGCAGTGAGACTGCCACACGCGTGCACATGT...CTCCTGGGTTTGAAGATGCAGGCCGATCGCCAGCTCCGTGGCAGCGGTCACTAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR CCA 90 bp GGAGCGCCGGGTCGGCGTGTCCAAAGAGCGGGGGCAAAACGGCATCGAGGCAGAAAGAAAACTAAGAGATaGCGGCAAGCGTGGTCATCG +
Preference number: 4 (lower is better)
Translates to: GAPGRRVQRAGAKRHRGRKKTKR*RQAWSS
Trigger: CGATGACCACGCTTGCCGCCATCTCTTAGTTTTCTT...TCTGCCTCGATGCCGTTTTGCCCCCGCTCTTTGGACACGCCGACCCGGCGCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR CCA 90 bp TCTTTCACGGGAATCTTGTTGGGACAGCATTCCTTGGGGAGCGCCGGGTCGGCGCCTCCCCTTGTGAGCTaGCAGACAAGCCTGTCCTTC +
Preference number: 4 (lower is better)
Translates to: SFTGILLGQHSLGSAGSAPPLVS*QTSLSF
Trigger: GAAGGACAGGCTTGTCTGCCAGCTCACAAGGGGAGG...CGCCGACCCGGCGCTCCCCAAGGAATGCTGTCCCAACAAGATTCCCGTGAAAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR CCA 90 bp GTCCGTTATCAGTGGGTTTACATCCGAAGGCCGGCGGCAAGACACTTGAACCACCCGCTGCCACGGAGCTaGCGATCGGCCTGCATCTTC +
Preference number: 4 (lower is better)
Translates to: VRYQWVYIRRPAARHLNHPLPRS*RSACIF
Trigger: GAAGATGCAGGCCGATCGCCAGCTCCGTGGCAGCGG...GTGGTTCAAGTGTCTTGCCGCCGGCCTTCGGATGTAAACCCACTGATAACGGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR CCA 90 bp CAAAATGCCATGAATGGAATCGGAAGGCGCTCCACCACCTCCAACACCCTGGCACCGCTGCCACGGAGCTaGCGATCGGCCTGCATCTTC +
Preference number: 4 (lower is better)
Translates to: QNAMNGIGRRSTTSNTLAPLPRS*RSACIF
Trigger: GAAGATGCAGGCCGATCGCCAGCTCCGTGGCAGCGG...TGCCAGGGTGTTGGAGGTGGTGGAGCGCCTTCCGATTCCATTCATGGCATTTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR CCA 90 bp TGGCACAGTCAGGCTGTCCTTAGTGACCGCTGCCACGGAGCTGGCGATCGGCCTCAATGCGGTCGTCCATaGAGAAGGCTCTCTGTACCA +
Preference number: 4 (lower is better)
Translates to: WHSQAVLSDRCHGAGDRPQCGRP*RRLSVP
Trigger: TGGTACAGAGAGCCTTCTCCATGGACGACCGCATTG...AGGCCGATCGCCAGCTCCGTGGCAGCGGTCACTAAGGACAGCCTGACTGTGCCA
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525159.5
CDS-3UTR CCA 90 bp CGCCCCGTCCTGGACCGCCAGGAACCGAAAACCCACATGCACCCAAGAACAGGTGACGCCCCTGCTTATTaGAAACGCATGCCTGGGCAT +
Preference number: 4 (lower is better)
Translates to: RPVLDRQEPKTHMHPRTGDAPAY*KRMPGH
Trigger: ATGCCCAGGCATGCGTTTCCAATAAGCAGGGGCGTC...ACCTGTTCTTGGGTGCATGTGGGTTTTCGGTTCCTGGCGGTCCAGGACGGGGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000530506.5
CDS-3UTR CCA 90 bp GCGACACGGGTGCTCTTTCACGGGAATCTTGTTGGGACAGCATTCCTTGGGGAGCCCCTAGGAGCAAGATaGGGACCCCTCCAGGCCAAG +
Preference number: 4 (lower is better)
Translates to: ATRVLFHGNLVGTAFLGEPLGAR*GPLQAK
Trigger: CTTGGCCTGGAGGGGTCCCCATCTTGCTCCTAGGGG...CTCCCCAAGGAATGCTGTCCCAACAAGATTCCCGTGAAAGAGCACCCGTGTCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000530506.5
3UTR CAA 72 bp GCTTCCAGCACGGAGCGGATCACCTCCTGGTCCATGTaGGGGAACATGTCCTGGATGGCTTTCAGGTCCTCC +
Preference number: 4 (lower is better)
Translates to: ASSTERITSWSM*GNMSWMAFRSS
Trigger: GGAGGACCTGAAAGCCATCCAGGACATGTTCCCCAACATGGACCAGGAGGTGATCCGCTCCGTGCTGGAAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527938.5
ENST00000530506.5
CDS-3UTR TCA 90 bp CCTCCTGGTCCATGTTGGGGAACATGTCCTGGATGGCTTTCAGGTCCTCCTCGCGCACCGTGCAGTGGATaGCCTTATTCCAGCGGGGAT +
Preference number: 4 (lower is better)
Translates to: PPGPCWGTCPGWLSGPPRAPCSG*PYSSGD
Trigger: ATCCCCGCTGGAATAAGGTCATCCACTGCACGGTGC...GCGAGGAGGACCTGAAAGCCATCCAGGACATGTTCCCCAACATGGACCAGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530506.5
CDS-3UTR TCA 90 bp AAAATCTGTCCTGTAGGCCAAGATGCTACACGCAGCGCCCAGGCAGTCAGAGGTGGGACTCCGGGATGGTaGTGTGGGTCCAGGCAATGC +
Preference number: 4 (lower is better)
Translates to: KICPVGQDATRSAQAVRGGTPGW*CGSRQC
Trigger: GCATTGCCTGGACCCACATCACCATCCCGGAGTCCC...ACCTCTGACTGCCTGGGCGCTGCGTGTAGCATCTTGGCCTACAGGACAGATTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR TCA 90 bp GCGACACGGGTGCTCTTTCACGGGAATCTTGTTGGGACAGCATTCCTTGGGGAGCCTCGCAAGGCCTGTTaGGAAGAGAAGCTCCCTGGG +
Preference number: 4 (lower is better)
Translates to: ATRVLFHGNLVGTAFLGEPRKAC*EEKLPG
Trigger: CCCAGGGAGCTTCTCTTCTCAACAGGCCTTGCGAGG...CTCCCCAAGGAATGCTGTCCCAACAAGATTCCCGTGAAAGAGCACCCGTGTCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR TCA 90 bp CCCACATGCACCCAAGAACAGGTGTGGACGGGGCGGCACAGAAGTCCACGGGAGGTGGTCGGCGTCTGCTaGACAAATACCATGTCTTTC +
Preference number: 4 (lower is better)
Translates to: PTCTQEQVWTGRHRSPREVVGVC*TNTMSF
Trigger: GAAAGACATGGTATTTGTTCAGCAGACGCCGACCAC...CTCCCGTGGACTTCTGTGCCGCCCCGTCCACACCTGTTCTTGGGTGCATGTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR TCA 90 bp GCGACACGGGTGCTCTTTCACGGGAATCTTGTTGGGACAGCATTCCTTGGGGAGTGCAGCCTCCCCTTGTaGGCTGGCAGACAAGCCTGT +
Preference number: 4 (lower is better)
Translates to: ATRVLFHGNLVGTAFLGECSLPL*AGRQAC
Trigger: ACAGGCTTGTCTGCCAGCTCACAAGGGGAGGCTGCA...CTCCCCAAGGAATGCTGTCCCAACAAGATTCCCGTGAAAGAGCACCCGTGTCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR GCA 90 bp GCGACACGGGTGCTCTTTCACGGGAATCTTGTTGGGACAGCATTCCTTGGGGAGCTTGGCGCCATTGTGTaGCGTGGGCGTCTCGTACAC +
Preference number: 4 (lower is better)
Translates to: ATRVLFHGNLVGTAFLGELGAIV*RGRLVH
Trigger: GTGTACGAGACGCCCACGGCACACAATGGCGCCAAG...CTCCCCAAGGAATGCTGTCCCAACAAGATTCCCGTGAAAGAGCACCCGTGTCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000527886.5
ENST00000530506.5
CDS-3UTR GCA 90 bp CAAGAGCATTTTCCAGAACGGCATGAGAAGGAGAGACGCACGTCCCAGGGACAGTCCTTGTCGTCCCCCTaGCTCCCGCTCAGGCTGTAC +
Preference number: 4 (lower is better)
Translates to: QEHFPERHEKERRTSQGQSLSSP*LPLRLY
Trigger: GTACAGCCTGAGCGGGAGGCAGGGGGACGACAAGGA...CTGTCCCTGGGACGTGCGTCTCTCCTTCTCATGCCGTTCTGGAAAATGCTCTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR GCA 90 bp GAACCGAAAACCCACATGCACCCAAGAACAGGTGTGGACGGGGCGGCACAGAAGAGGGGGCGACACGGGTaGTCTTTCACGGGAATCTTG +
Preference number: 4 (lower is better)
Translates to: EPKTHMHPRTGVDGAAQKRGRHG*SFTGIL
Trigger: CAAGATTCCCGTGAAAGAGCACCCGTGTCGCCCCCT...CTTCTGTGCCGCCCCGTCCACACCTGTTCTTGGGTGCATGTGGGTTTTCGGTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
ENST00000530506.5
CDS-3UTR GCA 90 bp AGGGCTGGCAGCAGGGGCCACGTCCTCTCTAGGAGACACCCACAGAGCCACATGAACCGAAAACCCACATaGACCCAAGAACAGGTGTGG +
Preference number: 4 (lower is better)
Translates to: RAGSRGHVLSRRHPQSHMNRKPT*TQEQVW
Trigger: CCACACCTGTTCTTGGGTGCATGTGGGTTTTCGGTT...CATGTGGCTCTGTGGGTGTCTCCTAGAGAGGACGTGGCCCCTGCTGCCAGCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR GCA 90 bp CGGGTGCTCTTTCACGGGAATCTTGTTGGGACAGCATTCCTTGGGGAGCGCCGGCCATCCACAGGAAGCTaGTCAGCTCACCAGACCCAA +
Preference number: 4 (lower is better)
Translates to: RVLFHGNLVGTAFLGERRPSTGS*SAHQTQ
Trigger: TTGGGTCTGGTGAGCTGAGCAGCTTCCTGTGGATGG...CCGGCGCTCCCCAAGGAATGCTGTCCCAACAAGATTCCCGTGAAAGAGCACCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR GCA 90 bp ACAGCAGCTCCCAAGCTGTCAGCAGTCGGCTGGCAGTGCCACCACACCCTCTCGCGGAATCATGCACAGTaGTGCCTCTATCACCTCTCA +
Preference number: 4 (lower is better)
Translates to: TAAPKLSAVGWQCHHTLSRNHAQ*CLYHLS
Trigger: TGAGAGGTGATAGAGGCAGCACTGTGCATGATTCCG...CGAGAGGGTGTGGTGGCACTGCCAGCCGACTGCTGACAGCTTGGGAGCTGCTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR GCA 90 bp CCCACATGCACCCAAGAACAGGTGTGGACGGGGCGGCACAGAAGTCCACGGGAGACCCTCTCGGAATCATaGACAGTGCTGCCTCTATCA +
Preference number: 4 (lower is better)
Translates to: PTCTQEQVWTGRHRSPRETLSES*TVLPLS
Trigger: TGATAGAGGCAGCACTGTGCATGATTCCGAGAGGGT...CTCCCGTGGACTTCTGTGCCGCCCCGTCCACACCTGTTCTTGGGTGCATGTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR GCA 90 bp AGACCCAAGCCCTGGGCAGGGGCCAGGCTCACAGCAAAGCGCGTTAGGGCAAGGCACAAACACCAGACATaGAGGTGTCTCAATGGCATG +
Preference number: 4 (lower is better)
Translates to: RPKPWAGARLTAKRVRARHKHQT*RCLNGM
Trigger: CATGCCATTGAGACACCTGCATGTCTGGTGTTTGTG...CCTTGCCCTAACGCGCTTTGCTGTGAGCCTGGCCCCTGCCCAGGGCTTGGGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR GCA 90 bp CTGGTCCATGTTGGGGAACATGTCCTGGATGGCTTTCAGGTCCTCCTCGCTACAAGCTGGACCTGCCGCTaGTGCTGTGTGGGCGTGATG +
Preference number: 4 (lower is better)
Translates to: LVHVGEHVLDGFQVLLATSWTCR*CCVGVM
Trigger: CATCACGCCCACACAGCAGCAGCGGCAGGTCCAGCT...TGTAGCGAGGAGGACCTGAAAGCCATCCAGGACATGTTCCCCAACATGGACCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527938.5
CDS-3UTR GCA 90 bp CCCCGCCTGAGGCTCCAAGATGGCACAGTCAGGCTGTCCTTAGTGACCGCTGCCAGGGGCTCAGCAAGCTaGTTCTACAGTAAGCCACTT +
Preference number: 4 (lower is better)
Translates to: PRLRLQDGTVRLSLVTAARGSAS*FYSKPL
Trigger: AAGTGGCTTACTGTAGAAGCAGCTTGCTGAGCCCCT...GGCAGCGGTCACTAAGGACAGCCTGACTGTGCCATCTTGGAGCCTCAGGCGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR GCA 90 bp AGGGCTGGCAGCAGGGGCCACGTCCTCTCTAGGAGACACCCACAGAGCCACATGAGGGGCTCAGCAAGCTaGTTCTACAGTAAGCCACTT +
Preference number: 4 (lower is better)
Translates to: RAGSRGHVLSRRHPQSHMRGSAS*FYSKPL
Trigger: AAGTGGCTTACTGTAGAAGCAGCTTGCTGAGCCCCT...CATGTGGCTCTGTGGGTGTCTCCTAGAGAGGACGTGGCCCCTGCTGCCAGCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR GCA 90 bp AAAACCCACATGCACCCAAGAACAGGTGTGGACGGGGCGGCACAGAAGTCCACGAGCTGGCGATCGGCCTaGATCTTCAAACCCAGGAGC +
Preference number: 4 (lower is better)
Translates to: KTHMHPRTGVDGAAQKSTSWRSA*IFKPRS
Trigger: GCTCCTGGGTTTGAAGATGCAGGCCGATCGCCAGCT...CGTGGACTTCTGTGCCGCCCCGTCCACACCTGTTCTTGGGTGCATGTGGGTTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR CCA 90 bp CTGCAGCAGGGAGTTGATGGCGGCATCCTTGTTCCCTCGCTGGGCTTCCAGCACCAATGCGGTCGTCCATaGAGAAGGCTCTCTCATCGA +
Preference number: 4 (lower is better)
Translates to: LQQGVDGGILVPSLGFQHQCGRP*RRLSHR
Trigger: TCGATGAGAGAGCCTTCTCCATGGACGACCGCATTG...GTGCTGGAAGCCCAGCGAGGGAACAAGGATGCCGCCATCAACTCCCTGCTGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530506.5
CDS-3UTR CCA 90 bp TCCCAGGGGCCCCTCCGTCTGAGTGGTCGGCGTCTGCTGAACAAATACCATGTCCATCACCATGGCAGCTaGAAGCAGCGCGTAGGACAT +
Preference number: 4 (lower is better)
Translates to: SQGPLRLSGRRLLNKYHVHHHGS*KQRVGH
Trigger: ATGTCCTACGCGCTGCTTCCAGCTGCCATGGTGATG...GACATGGTATTTGTTCAGCAGACGCCGACCACTCAGACGGAGGGGCCCCTGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR CCA 90 bp CAAAATGCCATGAATGGAATCGGAAGGCGCTCCACCACCTCCAACACCCTGGCAGGGGTGGCATCACCATaGCAGCTGGAAGCAGCGCGT +
Preference number: 4 (lower is better)
Translates to: QNAMNGIGRRSTTSNTLAGVASP*QLEAAR
Trigger: ACGCGCTGCTTCCAGCTGCCATGGTGATGCCACCCC...TGCCAGGGTGTTGGAGGTGGTGGAGCGCCTTCCGATTCCATTCATGGCATTTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR CCA 90 bp GCGACACGGGTGCTCTTTCACGGGAATCTTGTTGGGACAGCATTCCTTGGGGAGATCAGGACCACGGGCTaGGGTGGCATCACCATGGCA +
Preference number: 4 (lower is better)
Translates to: ATRVLFHGNLVGTAFLGEIRTTG*GGITMA
Trigger: TGCCATGGTGATGCCACCCCAGCCCGTGGTCCTGAT...CTCCCCAAGGAATGCTGTCCCAACAAGATTCCCGTGAAAGAGCACCCGTGTCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
ENST00000530506.5
CDS-3UTR CCA 90 bp CGGGAATCTTGTTGGGACAGCATTCCTTGGGGAGCGCCGGGTCGGCGTGTCCAATTGGGGAACATGTCCTaGATGGCTTTCAGGTCCTCC +
Preference number: 4 (lower is better)
Translates to: RESCWDSIPWGAPGRRVQLGNMS*MAFRSS
Trigger: GGAGGACCTGAAAGCCATCCAGGACATGTTCCCCAA...TTGGACACGCCGACCCGGCGCTCCCCAAGGAATGCTGTCCCAACAAGATTCCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
ENST00000530506.5
CDS-3UTR CCA 90 bp ACCCACATGCACCCAAGAACAGGTGTGGACGGGGCGGCACAGAAGTCCACGGGATTGGGGAACATGTCCTaGATGGCTTTCAGGTCCTCC +
Preference number: 4 (lower is better)
Translates to: THMHPRTGVDGAAQKSTGLGNMS*MAFRSS
Trigger: GGAGGACCTGAAAGCCATCCAGGACATGTTCCCCAA...TCCCGTGGACTTCTGTGCCGCCCCGTCCACACCTGTTCTTGGGTGCATGTGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
ENST00000530506.5
CDS-3UTR CCA 90 bp TTGATGGCGGCATCCTTGTTCCCTCGCTGGGCTTCCAGCACGGAGCGGATCACCTTGGGGAACATGTCCTaGATGGCTTTCAGGTCCTCC +
Preference number: 4 (lower is better)
Translates to: LMAASLFPRWASSTERITLGNMS*MAFRSS
Trigger: GGAGGACCTGAAAGCCATCCAGGACATGTTCCCCAA...GGTGATCCGCTCCGTGCTGGAAGCCCAGCGAGGGAACAAGGATGCCGCCATCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527938.5
ENST00000530506.5
CDS-3UTR CCA 90 bp GCTCTCTACAGCAAGAGCATTTTCCAGAACGGCATGAGAAGGAGAGACGCACGTGCCCCCGCCCCGTCCTaGACCGCCAGGAACCGAAAA +
Preference number: 4 (lower is better)
Translates to: ALYSKSIFQNGMRRRDARAPAPS*TARNRK
Trigger: TTTTCGGTTCCTGGCGGTCCAGGACGGGGCGGGGGC...ACGTGCGTCTCTCCTTCTCATGCCGTTCTGGAAAATGCTCTTGCTGTAGAGAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR CCA 90 bp GGACAGCATTCCTTGGGGAGCGCCGGGTCGGCGTGTCCAAAGAGCGGGGGCAAAACAAAATGCCATGAATaGAATCGGAAGGCGCTCCAC +
Preference number: 4 (lower is better)
Translates to: GQHSLGSAGSACPKSGGKTKCHE*NRKALH
Trigger: GTGGAGCGCCTTCCGATTCCATTCATGGCATTTTGT...TTTGCCCCCGCTCTTTGGACACGCCGACCCGGCGCTCCCCAAGGAATGCTGTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR CCA 90 bp AAAACCCACATGCACCCAAGAACAGGTGTGGACGGGGCGGCACAGAAGTCCACGAGTCTGTCACAAGGCTaGCTGGACAGTGGCCAGGTG +
Preference number: 4 (lower is better)
Translates to: KTHMHPRTGVDGAAQKSTSLSQG*LDSGQV
Trigger: CACCTGGCCACTGTCCAGCCAGCCTTGTGACAGACT...CGTGGACTTCTGTGCCGCCCCGTCCACACCTGTTCTTGGGTGCATGTGGGTTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR CCA 90 bp GAAAACCCACATGCACCCAAGAACAGGTGTGGACGGGGCGGCACAGAAGTCCACAGTCTGTCACAAGGCTaGCTGGACAGTGGCCAGGTG +
Preference number: 4 (lower is better)
Translates to: ENPHAPKNRCGRGGTEVHSLSQG*LDSGQV
Trigger: CACCTGGCCACTGTCCAGCCAGCCTTGTGACAGACT...GTGGACTTCTGTGCCGCCCCGTCCACACCTGTTCTTGGGTGCATGTGGGTTTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR CCA 90 bp TGGCACAGTCAGGCTGTCCTTAGTGACCGCTGCCACGGAGCTGGCGATCGGCCTTCTGTCCGTTATCAGTaGGTTTACATCCGAAGGCCG +
Preference number: 4 (lower is better)
Translates to: WHSQAVLSDRCHGAGDRPSVRYQ*VYIRRP
Trigger: CGGCCTTCGGATGTAAACCCACTGATAACGGACAGA...AGGCCGATCGCCAGCTCCGTGGCAGCGGTCACTAAGGACAGCCTGACTGTGCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR CCA 90 bp TGCCCGCTGGCTGGCAATCAGGCAGAGCCTGGCCAACCGTGCCAGGCCCCCTTCCACCTTCATTCCCAATaGAGAAGAAATCTACACAGG +
Preference number: 4 (lower is better)
Translates to: CPLAGNQAEPGQPCQAPFHLHSQ*RRNLHR
Trigger: CCTGTGTAGATTTCTTCTCCATTGGGAATGAAGGTG...GAAGGGGGCCTGGCACGGTTGGCCAGGCTCTGCCTGATTGCCAGCCAGCGGGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR CCA 90 bp CCCAACGCGTCAGTGTCAGCTTCATCTAGATGGCCGTACTGTGCCAGGGACGCCTCATGCCGTAATTCTTaGCCAACTTTGCCGGCCCGC +
Preference number: 4 (lower is better)
Translates to: PNASVSASSRWPYCARDASCRNS*PTLPAR
Trigger: GCGGGCCGGCAAAGTTGGCCAAGAATTACGGCATGA...GGCGTCCCTGGCACAGTACGGCCATCTAGATGAAGCTGACACTGACGCGTTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530506.5
CDS-3UTR CCA 90 bp CCCATCTGCAGCAGGGAGTTGATGGCGGCATCCTTGTTCCCTCGCTGGGCTTCCAGTCCTCACAGGCTCTaGCAGATGTTCCTGCATCTC +
Preference number: 4 (lower is better)
Translates to: PICSRELMAASLFPRWASSPHRL*QMFLHL
Trigger: GAGATGCAGGAACATCTGCCAGAGCCTGTGAGGACT...GGAAGCCCAGCGAGGGAACAAGGATGCCGCCATCAACTCCCTGCTGCAGATGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530506.5
CDS-3UTR TCA 90 bp GAGGGGGCGACACGGGTGCTCTTTCACGGGAATCTTGTTGGGACAGCATTCCTTGCACCGTGCAGTGGATaGCCTTATTCCAGCGGGGAT +
Preference number: 4 (lower is better)
Translates to: EGATRVLFHGNLVGTAFLAPCSG*PYSSGD
Trigger: ATCCCCGCTGGAATAAGGTCATCCACTGCACGGTGC...AAGGAATGCTGTCCCAACAAGATTCCCGTGAAAGAGCACCCGTGTCGCCCCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000527886.5
ENST00000530506.5
CDS-3UTR TCA 90 bp GCGACACGGGTGCTCTTTCACGGGAATCTTGTTGGGACAGCATTCCTTGGGGAGTCTGCAGCAGGGAGTTaGTGGCGGCATCCTTGTTCC +
Preference number: 4 (lower is better)
Translates to: ATRVLFHGNLVGTAFLGESAAGS*WRHPCS
Trigger: GGAACAAGGATGCCGCCATCAACTCCCTGCTGCAGA...CTCCCCAAGGAATGCTGTCCCAACAAGATTCCCGTGAAAGAGCACCCGTGTCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
ENST00000530506.5
CDS-3UTR TCA 90 bp TCTTTCACGGGAATCTTGTTGGGACAGCATTCCTTGGGGAGCGCCGGGTCGGCGGTTAGGGCAAGGGCGTaGGTTTTCGTCTGGGAAGTT +
Preference number: 4 (lower is better)
Translates to: SFTGILLGQHSLGSAGSAVRARA*VFVWEV
Trigger: AACTTCCCAGACGAAAACTCACGCCCTTGCCCTAAC...CGCCGACCCGGCGCTCCCCAAGGAATGCTGTCCCAACAAGATTCCCGTGAAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR TCA 90 bp TCACCTCCTGGTCCATGTTGGGGAACATGTCCTGGATGGCTTTCAGGTCCTCCTATCCCTGTACCACCGTaGTGTTCAGTCGGCCCACGG +
Preference number: 4 (lower is better)
Translates to: SPPGPCWGTCPGWLSGPPIPVPP*CSVGPR
Trigger: CCGTGGGCCGACTGAACATCACGGTGGTACAGGGAT...AGGAGGACCTGAAAGCCATCCAGGACATGTTCCCCAACATGGACCAGGAGGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527938.5
CDS-3UTR GCA 90 bp CCCCTTCCTCACTCCAGGTGTGGGTTCATTCTGCCTTCAGGCCGGAGTCTGTCAGGCAGTAGGGGTCCATaGGGGTCATGCCGTAATTCT +
Preference number: 4 (lower is better)
Translates to: PLPHSRCGFILPSGRSLSGSRGP*GSCRNS
Trigger: AGAATTACGGCATGACCCGCATGGACCCCTACTGCC...TGACAGACTCCGGCCTGAAGGCAGAATGAACCCACACCTGGAGTGAGGAAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000527886.5
CDS-3UTR GCA 90 bp GGGAGCGCCGGGTCGGCGTGTCCAAAGAGCGGGGGCAAAACGGCATCGAGGCAGCATCACATCACAAAATaGCATGAATGGAATCGGAAG +
Preference number: 4 (lower is better)
Translates to: GSAGSACPKSGGKTASRQHHITK*HEWNRK
Trigger: CTTCCGATTCCATTCATGGCATTTTGTGATGTGATG...CTGCCTCGATGCCGTTTTGCCCCCGCTCTTTGGACACGCCGACCCGGCGCTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR GCA 90 bp GGGACAGCATTCCTTGGGGAGCGCCGGGTCGGCGTGTCCAAAGAGCGGGGGCAAGTGAGGGATTGTGTGTaGCTTAAATCAACAGCTCTA +
Preference number: 4 (lower is better)
Translates to: GTAFLGERRVGVSKERGQVRDCV*LKSTAL
Trigger: TAGAGCTGTTGATTTAAGGCACACACAATCCCTCAC...TTGCCCCCGCTCTTTGGACACGCCGACCCGGCGCTCCCCAAGGAATGCTGTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR GCA 90 bp CGGGAATCTTGTTGGGACAGCATTCCTTGGGGAGCGCCGGGTCGGCGTGTCCAAAATCATGCACAGTGCTaGCTCTATCACCTCTCACCC +
Preference number: 4 (lower is better)
Translates to: RESCWDSIPWGAPGRRVQNHAQC*LYHLSP
Trigger: GGGTGAGAGGTGATAGAGGCAGCACTGTGCATGATT...TTGGACACGCCGACCCGGCGCTCCCCAAGGAATGCTGTCCCAACAAGATTCCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR GCA 90 bp GTCAGGCTGTCCTTAGTGACCGCTGCCACGGAGCTGGCGATCGGCCTGCATCTTAATCATGCACAGTGCTaGCTCTATCACCTCTCACCC +
Preference number: 4 (lower is better)
Translates to: VRLSLVTAATELAIGLHLNHAQC*LYHLSP
Trigger: GGGTGAGAGGTGATAGAGGCAGCACTGTGCATGATT...AAGATGCAGGCCGATCGCCAGCTCCGTGGCAGCGGTCACTAAGGACAGCCTGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR GCA 90 bp CGGGAATCTTGTTGGGACAGCATTCCTTGGGGAGCGCCGGGTCGGCGTGTCCAAACCCTCTCGGAATCATaGACAGTGCTGCCTCTATCA +
Preference number: 4 (lower is better)
Translates to: RESCWDSIPWGAPGRRVQTLSES*TVLPLS
Trigger: TGATAGAGGCAGCACTGTGCATGATTCCGAGAGGGT...TTGGACACGCCGACCCGGCGCTCCCCAAGGAATGCTGTCCCAACAAGATTCCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR GCA 90 bp AGGCAGTCAGAGGTAAGTGAGCGCCTCCCGCCTCAGAAAGCTTTTACAGGGCCACCACAGAGCCACATGTaGACGCGTGTGGCAGTCTCA +
Preference number: 4 (lower is better)
Translates to: RQSEVSERLPPQKAFTGPPQSHM*TRVAVS
Trigger: TGAGACTGCCACACGCGTGCACATGTGGCTCTGTGG...TGGCCCTGTAAAAGCTTTCTGAGGCGGGAGGCGCTCACTTACCTCTGACTGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR GCA 90 bp GACCGCCAGGAACCGAAAACCCACATGCACCCAAGAACAGGTGTGGACGGGGCGAGGGGCTCAGCAAGCTaGTTCTACAGTAAGCCACTT +
Preference number: 4 (lower is better)
Translates to: DRQEPKTHMHPRTGVDGARGSAS*FYSKPL
Trigger: AAGTGGCTTACTGTAGAAGCAGCTTGCTGAGCCCCT...CGCCCCGTCCACACCTGTTCTTGGGTGCATGTGGGTTTTCGGTTCCTGGCGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR CCA 90 bp AATTACATCACATCACAAAATGCCATGAATGGAATCGGAAGGCGCTCCACCACCTCGCTACAGCGGGGCTaGGCGTTCACGGCGGCCGGG +
Preference number: 4 (lower is better)
Translates to: NYITSQNAMNGIGRRSTTSLQRG*AFTAAG
Trigger: CCCGGCCGCCGTGAACGCCCAGCCCCGCTGTAGCGA...GGTGGTGGAGCGCCTTCCGATTCCATTCATGGCATTTTGTGATGTGATGTAATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR CCA 90 bp AAGTCCACGGGAGGGGGCGACACGGGTGCTCTTTCACGGGAATCTTGTTGGGACTTGGGGAACATGTCCTaGATGGCTTTCAGGTCCTCC +
Preference number: 4 (lower is better)
Translates to: KSTGGGDTGALSRESCWDLGNMS*MAFRSS
Trigger: GGAGGACCTGAAAGCCATCCAGGACATGTTCCCCAA...GTCCCAACAAGATTCCCGTGAAAGAGCACCCGTGTCGCCCCCTCCCGTGGACTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
ENST00000530506.5
CDS-3UTR CCA 90 bp CCCCTTCCTCACTCCAGGTGTGGGTTCATTCTGCCTTCAGGCCGGAGTCTGTCACCTCCTGGTCCATGTTaGGGAACATGTCCTGGATGG +
Preference number: 4 (lower is better)
Translates to: PLPHSRCGFILPSGRSLSPPGPC*GTCPGW
Trigger: CCATCCAGGACATGTTCCCCAACATGGACCAGGAGG...TGACAGACTCCGGCCTGAAGGCAGAATGAACCCACACCTGGAGTGAGGAAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR CCA 90 bp CATGTTGGGGAACATGTCCTGGATGGCTTTCAGGTCCTCCTCGCTACAGCGGGGGAGCGGATCACCTCCTaGTCCATGTTGGGGAACATG +
Preference number: 4 (lower is better)
Translates to: HVGEHVLDGFQVLLATAGERITS*SMLGNM
Trigger: CATGTTCCCCAACATGGACCAGGAGGTGATCCGCTC...CCCCGCTGTAGCGAGGAGGACCTGAAAGCCATCCAGGACATGTTCCCCAACATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000527938.5
ENST00000530506.5
CDS-3UTR CCA 90 bp TGGTCCATGTTGGGGAACATGTCCTGGATGGCTTTCAGGTCCTCCTCGCTACAGGAGGCAGAGGCTCTATaGCTCCTCCCCCATCTGCAG +
Preference number: 4 (lower is better)
Translates to: WSMLGNMSWMAFRSSSLQEAEAL*LLPHLQ
Trigger: CTGCAGATGGGGGAGGAGCCATAGAGCCTCTGCCTC...CTGTAGCGAGGAGGACCTGAAAGCCATCCAGGACATGTTCCCCAACATGGACCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000527938.5
ENST00000530506.5
CDS-3UTR CCA 90 bp CCCACATGCACCCAAGAACAGGTGTGGACGGGGCGGCACAGAAGTCCACGGGAGACAAAATGCCATGAATaGAATCGGAAGGCGCTCCAC +
Preference number: 4 (lower is better)
Translates to: PTCTQEQVWTGRHRSPRETKCHE*NRKALH
Trigger: GTGGAGCGCCTTCCGATTCCATTCATGGCATTTTGT...CTCCCGTGGACTTCTGTGCCGCCCCGTCCACACCTGTTCTTGGGTGCATGTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR CCA 90 bp TCTTTCACGGGAATCTTGTTGGGACAGCATTCCTTGGGGAGCGCCGGGTCGGCGTCCTCACTCCAGGTGTaGGTTCATTCTGCCTTCAGG +
Preference number: 4 (lower is better)
Translates to: SFTGILLGQHSLGSAGSASSLQV*VHSAFR
Trigger: CCTGAAGGCAGAATGAACCCACACCTGGAGTGAGGA...CGCCGACCCGGCGCTCCCCAAGGAATGCTGTCCCAACAAGATTCCCGTGAAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR CCA 90 bp GCGACACGGGTGCTCTTTCACGGGAATCTTGTTGGGACAGCATTCCTTGGGGAGAGAAGAGAAGCTCCCTaGGAGGACACCCACGGAGCT +
Preference number: 4 (lower is better)
Translates to: ATRVLFHGNLVGTAFLGERREAP*EDTHGA
Trigger: AGCTCCGTGGGTGTCCTCCCAGGGAGCTTCTCTTCT...CTCCCCAAGGAATGCTGTCCCAACAAGATTCCCGTGAAAGAGCACCCGTGTCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR CCA 90 bp AAGTCCACGGGAGGGGGCGACACGGGTGCTCTTTCACGGGAATCTTGTTGGGACTCAGCTTCATCTAGATaGCCGTACTGTGCCAGGGAC +
Preference number: 4 (lower is better)
Translates to: KSTGGGDTGALSRESCWDSASSR*PYCARD
Trigger: GTCCCTGGCACAGTACGGCCATCTAGATGAAGCTGA...GTCCCAACAAGATTCCCGTGAAAGAGCACCCGTGTCGCCCCCTCCCGTGGACTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000530506.5
CDS-3UTR TCA 90 bp CAAAATGCCATGAATGGAATCGGAAGGCGCTCCACCACCTCCAACACCCTGGCATCTGCAGCAGGGAGTTaGTGGCGGCATCCTTGTTCC +
Preference number: 4 (lower is better)
Translates to: QNAMNGIGRRSTTSNTLASAAGS*WRHPCS
Trigger: GGAACAAGGATGCCGCCATCAACTCCCTGCTGCAGA...TGCCAGGGTGTTGGAGGTGGTGGAGCGCCTTCCGATTCCATTCATGGCATTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR TCA 90 bp CAAAATGCCATGAATGGAATCGGAAGGCGCTCCACCACCTCCAACACCCTGGCATTTAGGACCCACAGCTaGAGAAGGCGCCTGCTGCCA +
Preference number: 4 (lower is better)
Translates to: QNAMNGIGRRSTTSNTLAFRTHS*RRRLLP
Trigger: TGGCAGCAGGCGCCTTCTTCAGCTGTGGGTCCTAAA...TGCCAGGGTGTTGGAGGTGGTGGAGCGCCTTCCGATTCCATTCATGGCATTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR TCA 90 bp TCCAAAGAGCGGGGGCAAAACGGCATCGAGGCAGAGGCTCTATGGCTCCTCCCCTTGGGAACTTTTCTATaGAGTGCGGGGCTGTTCCAA +
Preference number: 4 (lower is better)
Translates to: SKERGQNGIEAEALWLLPLGTFL*SAGLFQ
Trigger: TTGGAACAGCCCCGCACTTCATAGAAAAGTTCCCAA...GGGGAGGAGCCATAGAGCCTCTGCCTCGATGCCGTTTTGCCCCCGCTCTTTGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 1 transcripts:
ENST00000530506.5
CDS-3UTR GCA 90 bp GAAAACCCACATGCACCCAAGAACAGGTGTGGACGGGGCGGCACAGAAGTCCACGGTCCATGCGGGTCATaGCGTAATTCTTGGCCAACT +
Preference number: 4 (lower is better)
Translates to: ENPHAPKNRCGRGGTEVHGPCGS*RNSWPT
Trigger: AGTTGGCCAAGAATTACGGCATGACCCGCATGGACC...GTGGACTTCTGTGCCGCCCCGTCCACACCTGTTCTTGGGTGCATGTGGGTTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000527886.5
ENST00000530506.5
CDS-3UTR GCA 90 bp CAAAATGCCATGAATGGAATCGGAAGGCGCTCCACCACCTCCAACACCCTGGCAAGGGGGCGACACGGGTaGTCTTTCACGGGAATCTTG +
Preference number: 4 (lower is better)
Translates to: QNAMNGIGRRSTTSNTLARGRHG*SFTGIL
Trigger: CAAGATTCCCGTGAAAGAGCACCCGTGTCGCCCCCT...TGCCAGGGTGTTGGAGGTGGTGGAGCGCCTTCCGATTCCATTCATGGCATTTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR GCA 90 bp CGCACGTCCCAGGGACAGGAGAGCGCGCTGAGACCTCCCAGCACGAGATGGGAGCATCACATCACAAAATaGCATGAATGGAATCGGAAG +
Preference number: 4 (lower is better)
Translates to: RTSQGQESALRPPSTRWEHHITK*HEWNRK
Trigger: CTTCCGATTCCATTCATGGCATTTTGTGATGTGATG...CTCCCATCTCGTGCTGGGAGGTCTCAGCGCGCTCTCCTGTCCCTGGGACGTGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR GCA 90 bp CGGGTGCTCTTTCACGGGAATCTTGTTGGGACAGCATTCCTTGGGGAGCGCCGGCGGAATCATGCACAGTaGTGCCTCTATCACCTCTCA +
Preference number: 4 (lower is better)
Translates to: RVLFHGNLVGTAFLGERRRNHAQ*CLYHLS
Trigger: TGAGAGGTGATAGAGGCAGCACTGTGCATGATTCCG...CCGGCGCTCCCCAAGGAATGCTGTCCCAACAAGATTCCCGTGAAAGAGCACCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR GCA 90 bp CAGCAGGAGAGACGGACGGCAGCCTCCGGCGGGCGAAGGACCCGGCTTCAGATGGGTGTCTCAATGGCATaGAGATTATTTAAAGTGCAT +
Preference number: 4 (lower is better)
Translates to: QQERRTAASGGRRTRLQMGVSMA*RLFKVH
Trigger: ATGCACTTTAAATAATCTGCATGCCATTGAGACACC...CATCTGAAGCCGGGTCCTTCGCCCGCCGGAGGCTGCCGTCCGTCTCTCCTGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR GCA 90 bp GGGGGCGACACGGGTGCTCTTTCACGGGAATCTTGTTGGGACAGCATTCCTTGGGGCATTTCATGCAACTaGTCTTGGCAAGGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: GGDTGALSRESCWDSIPWGISCN*SWQGSS
Trigger: GGAGCTGCCTTGCCAAGAGCAGTTGCATGAAATGCC...CCAAGGAATGCTGTCCCAACAAGATTCCCGTGAAAGAGCACCCGTGTCGCCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000527886.5
CDS-3UTR CCA 90 bp GGGGGCGACACGGGTGCTCTTTCACGGGAATCTTGTTGGGACAGCATTCCTTGGCAATGCGGTCGTCCATaGAGAAGGCTCTCTCATCGA +
Preference number: 4 (lower is better)
Translates to: GGDTGALSRESCWDSIPWQCGRP*RRLSHR
Trigger: TCGATGAGAGAGCCTTCTCCATGGACGACCGCATTG...CCAAGGAATGCTGTCCCAACAAGATTCCCGTGAAAGAGCACCCGTGTCGCCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000527886.5
ENST00000530506.5
CDS-3UTR CCA 90 bp AGGCAGTCAGAGGTAAGTGAGCGCCTCCCGCCTCAGAAAGCTTTTACAGGGCCAGGAACATGTCCTGGATaGCTTTCAGGTCCTCCTCGC +
Preference number: 4 (lower is better)
Translates to: RQSEVSERLPPQKAFTGPGTCPG*LSGPPR
Trigger: GCGAGGAGGACCTGAAAGCCATCCAGGACATGTTCC...TGGCCCTGTAAAAGCTTTCTGAGGCGGGAGGCGCTCACTTACCTCTGACTGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR CCA 90 bp CACCTCCTGGTCCATGTTGGGGAACATGTCCTGGATGGCTTTCAGGTCCTCCTCCCTCCTGGTCCATGTTaGGGAACATGTCCTGGATGG +
Preference number: 4 (lower is better)
Translates to: HLLVHVGEHVLDGFQVLLPPGPC*GTCPGW
Trigger: CCATCCAGGACATGTTCCCCAACATGGACCAGGAGG...GAGGAGGACCTGAAAGCCATCCAGGACATGTTCCCCAACATGGACCAGGAGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527938.5
ENST00000530506.5
CDS-3UTR CCA 90 bp CACCTCCTGGTCCATGTTGGGGAACATGTCCTGGATGGCTTTCAGGTCCTCCTCGAGCGGATCACCTCCTaGTCCATGTTGGGGAACATG +
Preference number: 4 (lower is better)
Translates to: HLLVHVGEHVLDGFQVLLERITS*SMLGNM
Trigger: CATGTTCCCCAACATGGACCAGGAGGTGATCCGCTC...GAGGAGGACCTGAAAGCCATCCAGGACATGTTCCCCAACATGGACCAGGAGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000527938.5
ENST00000530506.5
CDS-3UTR CCA 90 bp TCTTTCACGGGAATCTTGTTGGGACAGCATTCCTTGGGGAGCGCCGGGTCGGCGTCACGGGAATCTTGTTaGGACAGCATTCCTTGGGGA +
Preference number: 4 (lower is better)
Translates to: SFTGILLGQHSLGSAGSASRESC*DSIPWG
Trigger: TCCCCAAGGAATGCTGTCCCAACAAGATTCCCGTGA...CGCCGACCCGGCGCTCCCCAAGGAATGCTGTCCCAACAAGATTCCCGTGAAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
ENST00000530506.5
CDS-3UTR CCA 90 bp CTGGTCCATGTTGGGGAACATGTCCTGGATGGCTTTCAGGTCCTCCTCGCTACAACCCAAGAACAGGTGTaGACGGGGCGGCACAGAAGT +
Preference number: 4 (lower is better)
Translates to: LVHVGEHVLDGFQVLLATTQEQV*TGRHRS
Trigger: ACTTCTGTGCCGCCCCGTCCACACCTGTTCTTGGGT...TGTAGCGAGGAGGACCTGAAAGCCATCCAGGACATGTTCCCCAACATGGACCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530506.5
CDS-3UTR CCA 90 bp AAAACCCACATGCACCCAAGAACAGGTGTGGACGGGGCGGCACAGAAGTCCACGTCCTCACTCCAGGTGTaGGTTCATTCTGCCTTCAGG +
Preference number: 4 (lower is better)
Translates to: KTHMHPRTGVDGAAQKSTSSLQV*VHSAFR
Trigger: CCTGAAGGCAGAATGAACCCACACCTGGAGTGAGGA...CGTGGACTTCTGTGCCGCCCCGTCCACACCTGTTCTTGGGTGCATGTGGGTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR CCA 90 bp CAAGAGCATTTTCCAGAACGGCATGAGAAGGAGAGACGCACGTCCCAGGGACAGAGATGGCGGCAAGCGTaGTCATCGGCAAAGGGTTGC +
Preference number: 4 (lower is better)
Translates to: QEHFPERHEKERRTSQGQRWRQA*SSAKGC
Trigger: GCAACCCTTTGCCGATGACCACGCTTGCCGCCATCT...CTGTCCCTGGGACGTGCGTCTCTCCTTCTCATGCCGTTCTGGAAAATGCTCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR CCA 90 bp ACCCCAGCCTCGCAAGGCCTGTTGAGAAGAGAAGCTCCCTGGGAGGACACCCACAAGAAAACTAAGAGATaGCGGCAAGCGTGGTCATCG +
Preference number: 4 (lower is better)
Translates to: TPASQGLLRREAPWEDTHKKTKR*RQAWSS
Trigger: CGATGACCACGCTTGCCGCCATCTCTTAGTTTTCTT...GTGGGTGTCCTCCCAGGGAGCTTCTCTTCTCAACAGGCCTTGCGAGGCTGGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR TCA 90 bp CGGCAAGCGTGGTCATCGGCAAAGGGTTGCTCTCCCTCCAGCGAGGCTGGCCCCAAAGTGCATCACTTGTaGGAAGCTTCTCAAATTTCT +
Preference number: 4 (lower is better)
Translates to: RQAWSSAKGCSPSSEAGPKVHHL*EASQIS
Trigger: AGAAATTTGAGAAGCTTCTCACAAGTGATGCACTTT...GGGGCCAGCCTCGCTGGAGGGAGAGCAACCCTTTGCCGATGACCACGCTTGCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR GCA 90 bp ACAGCAGCTCCCAAGCTGTCAGCAGTCGGCTGGCAGTGCCACCACACCCTCTCGGTGAGGGATTGTGTGTaGCTTAAATCAACAGCTCTA +
Preference number: 4 (lower is better)
Translates to: TAAPKLSAVGWQCHHTLSVRDCV*LKSTAL
Trigger: TAGAGCTGTTGATTTAAGGCACACACAATCCCTCAC...CGAGAGGGTGTGGTGGCACTGCCAGCCGACTGCTGACAGCTTGGGAGCTGCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR GCA 90 bp CAAGAGCATTTTCCAGAACGGCATGAGAAGGAGAGACGCACGTCCCAGGGACAGCCATCCACAGGAAGCTaGTCAGCTCACCAGACCCAA +
Preference number: 4 (lower is better)
Translates to: QEHFPERHEKERRTSQGQPSTGS*SAHQTQ
Trigger: TTGGGTCTGGTGAGCTGAGCAGCTTCCTGTGGATGG...CTGTCCCTGGGACGTGCGTCTCTCCTTCTCATGCCGTTCTGGAAAATGCTCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR GCA 90 bp AAAACCCACATGCACCCAAGAACAGGTGTGGACGGGGCGGCACAGAAGTCCACGCGGAATCATGCACAGTaGTGCCTCTATCACCTCTCA +
Preference number: 4 (lower is better)
Translates to: KTHMHPRTGVDGAAQKSTRNHAQ*CLYHLS
Trigger: TGAGAGGTGATAGAGGCAGCACTGTGCATGATTCCG...CGTGGACTTCTGTGCCGCCCCGTCCACACCTGTTCTTGGGTGCATGTGGGTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR GCA 90 bp GAAAACCCACATGCACCCAAGAACAGGTGTGGACGGGGCGGCACAGAAGTCCACACCCTCTCGGAATCATaGACAGTGCTGCCTCTATCA +
Preference number: 4 (lower is better)
Translates to: ENPHAPKNRCGRGGTEVHTLSES*TVLPLS
Trigger: TGATAGAGGCAGCACTGTGCATGATTCCGAGAGGGT...GTGGACTTCTGTGCCGCCCCGTCCACACCTGTTCTTGGGTGCATGTGGGTTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR GCA 90 bp GGGGGCGACACGGGTGCTCTTTCACGGGAATCTTGTTGGGACAGCATTCCTTGGACCCTCTCGGAATCATaGACAGTGCTGCCTCTATCA +
Preference number: 4 (lower is better)
Translates to: GGDTGALSRESCWDSIPWTLSES*TVLPLS
Trigger: TGATAGAGGCAGCACTGTGCATGATTCCGAGAGGGT...CCAAGGAATGCTGTCCCAACAAGATTCCCGTGAAAGAGCACCCGTGTCGCCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR GCA 90 bp AAGTCCACGGGAGGGGGCGACACGGGTGCTCTTTCACGGGAATCTTGTTGGGACCACAAACACCAGACATaGAGGTGTCTCAATGGCATG +
Preference number: 4 (lower is better)
Translates to: KSTGGGDTGALSRESCWDHKHQT*RCLNGM
Trigger: CATGCCATTGAGACACCTGCATGTCTGGTGTTTGTG...GTCCCAACAAGATTCCCGTGAAAGAGCACCCGTGTCGCCCCCTCCCGTGGACTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR CCA 90 bp CAAAATGCCATGAATGGAATCGGAAGGCGCTCCACCACCTCCAACACCCTGGCACATCACCATGGCAGCTaGAAGCAGCGCGTAGGACAT +
Preference number: 4 (lower is better)
Translates to: QNAMNGIGRRSTTSNTLAHHHGS*KQRVGH
Trigger: ATGTCCTACGCGCTGCTTCCAGCTGCCATGGTGATG...TGCCAGGGTGTTGGAGGTGGTGGAGCGCCTTCCGATTCCATTCATGGCATTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR CCA 90 bp ACGGGAGGGGGCGACACGGGTGCTCTTTCACGGGAATCTTGTTGGGACAGCATTTCACGGGAATCTTGTTaGGACAGCATTCCTTGGGGA +
Preference number: 4 (lower is better)
Translates to: TGGGDTGALSRESCWDSISRESC*DSIPWG
Trigger: TCCCCAAGGAATGCTGTCCCAACAAGATTCCCGTGA...AATGCTGTCCCAACAAGATTCCCGTGAAAGAGCACCCGTGTCGCCCCCTCCCGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
ENST00000530506.5
CDS-3UTR CCA 90 bp AAAACCCACATGCACCCAAGAACAGGTGTGGACGGGGCGGCACAGAAGTCCACGTCTGTCCGTTATCAGTaGGTTTACATCCGAAGGCCG +
Preference number: 4 (lower is better)
Translates to: KTHMHPRTGVDGAAQKSTSVRYQ*VYIRRP
Trigger: CGGCCTTCGGATGTAAACCCACTGATAACGGACAGA...CGTGGACTTCTGTGCCGCCCCGTCCACACCTGTTCTTGGGTGCATGTGGGTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR CCA 90 bp ACGGGAGGGGGCGACACGGGTGCTCTTTCACGGGAATCTTGTTGGGACAGCATTTCTGTCCGTTATCAGTaGGTTTACATCCGAAGGCCG +
Preference number: 4 (lower is better)
Translates to: TGGGDTGALSRESCWDSISVRYQ*VYIRRP
Trigger: CGGCCTTCGGATGTAAACCCACTGATAACGGACAGA...AATGCTGTCCCAACAAGATTCCCGTGAAAGAGCACCCGTGTCGCCCCCTCCCGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR CCA 90 bp AATTACATCACATCACAAAATGCCATGAATGGAATCGGAAGGCGCTCCACCACCGGCAGAAACCGGTGCTaGTGGCCACACCTGGGCGCC +
Preference number: 4 (lower is better)
Translates to: NYITSQNAMNGIGRRSTTGRNRC*WPHLGA
Trigger: GGCGCCCAGGTGTGGCCACCAGCACCGGTTTCTGCC...GGTGGTGGAGCGCCTTCCGATTCCATTCATGGCATTTTGTGATGTGATGTAATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR TCA 90 bp AAAATCTGTCCTGTAGGCCAAGATGCTACACGCAGCGCCCAGGCAGTCAGAGGTTTTTCCAGAACGGCATaGGAAGGAGAGACGCACGTC +
Preference number: 4 (lower is better)
Translates to: KICPVGQDATRSAQAVRGFSRTA*EGETHV
Trigger: GACGTGCGTCTCTCCTTCTCATGCCGTTCTGGAAAA...ACCTCTGACTGCCTGGGCGCTGCGTGTAGCATCTTGGCCTACAGGACAGATTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR TCA 90 bp GGGGGCGACACGGGTGCTCTTTCACGGGAATCTTGTTGGGACAGCATTCCTTGGCATCACAAAATGCCATaGATGGAATCGGAAGGCGCT +
Preference number: 4 (lower is better)
Translates to: GGDTGALSRESCWDSIPWHHKMP*MESEGA
Trigger: AGCGCCTTCCGATTCCATTCATGGCATTTTGTGATG...CCAAGGAATGCTGTCCCAACAAGATTCCCGTGAAAGAGCACCCGTGTCGCCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR TCA 90 bp CCCCTTCCTCACTCCAGGTGTGGGTTCATTCTGCCTTCAGGCCGGAGTCTGTCACATCACAAAATGCCATaGATGGAATCGGAAGGCGCT +
Preference number: 4 (lower is better)
Translates to: PLPHSRCGFILPSGRSLSHHKMP*MESEGA
Trigger: AGCGCCTTCCGATTCCATTCATGGCATTTTGTGATG...TGACAGACTCCGGCCTGAAGGCAGAATGAACCCACACCTGGAGTGAGGAAGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR TCA 90 bp TGTTGGGACAGCATTCCTTGGGGAGCGCCGGGTCGGCGTGTCCAAAGAGCGGGGAAAGTGCATCACTTGTaGGAAGCTTCTCAAATTTCT +
Preference number: 4 (lower is better)
Translates to: CWDSIPWGAPGRRVQRAGKVHHL*EASQIS
Trigger: AGAAATTTGAGAAGCTTCTCACAAGTGATGCACTTT...CCCCGCTCTTTGGACACGCCGACCCGGCGCTCCCCAAGGAATGCTGTCCCAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR GCA 90 bp TCAGTGTCAGCTTCATCTAGATGGCCGTACTGTGCCAGGGACGCCCCTGCTTATGGTCCATGCGGGTCATaGCGTAATTCTTGGCCAACT +
Preference number: 4 (lower is better)
Translates to: SVSASSRWPYCARDAPAYGPCGS*RNSWPT
Trigger: AGTTGGCCAAGAATTACGGCATGACCCGCATGGACC...ATAAGCAGGGGCGTCCCTGGCACAGTACGGCCATCTAGATGAAGCTGACACTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530506.5
CDS-3UTR GCA 90 bp ACCCACATGCACCCAAGAACAGGTGTGGACGGGGCGGCACAGAAGTCCACGGGAGTGAGGGATTGTGTGTaGCTTAAATCAACAGCTCTA +
Preference number: 4 (lower is better)
Translates to: THMHPRTGVDGAAQKSTGVRDCV*LKSTAL
Trigger: TAGAGCTGTTGATTTAAGGCACACACAATCCCTCAC...TCCCGTGGACTTCTGTGCCGCCCCGTCCACACCTGTTCTTGGGTGCATGTGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR GCA 90 bp TCTTTCACGGGAATCTTGTTGGGACAGCATTCCTTGGGGAGCGCCGGGTCGGCGATAAGTGGCATTTCATaGAACTGCTCTTGGCAAGGC +
Preference number: 4 (lower is better)
Translates to: SFTGILLGQHSLGSAGSAISGIS*NCSWQG
Trigger: GCCTTGCCAAGAGCAGTTGCATGAAATGCCACTTAT...CGCCGACCCGGCGCTCCCCAAGGAATGCTGTCCCAACAAGATTCCCGTGAAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527886.5
CDS-3UTR GCA 90 bp CGGGTGCTCTTTCACGGGAATCTTGTTGGGACAGCATTCCTTGGGGAGCGCCGGTCTGGCAGATGTTCCTaGATCTCCTTGGGAACTTTT +
Preference number: 4 (lower is better)
Translates to: RVLFHGNLVGTAFLGERRSGRCS*ISLGTF
Trigger: AAAAGTTCCCAAGGAGATGCAGGAACATCTGCCAGA...CCGGCGCTCCCCAAGGAATGCTGTCCCAACAAGATTCCCGTGAAAGAGCACCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530506.5
CDS-3UTR CCA 90 bp GTCCGTTATCAGTGGGTTTACATCCGAAGGCCGGCGGCAAGACACTTGAACCACTTGGGGAACATGTCCTaGATGGCTTTCAGGTCCTCC +
Preference number: 4 (lower is better)
Translates to: VRYQWVYIRRPAARHLNHLGNMS*MAFRSS
Trigger: GGAGGACCTGAAAGCCATCCAGGACATGTTCCCCAA...GTGGTTCAAGTGTCTTGCCGCCGGCCTTCGGATGTAAACCCACTGATAACGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR CCA 90 bp AGGCAGTCAGAGGTAAGTGAGCGCCTCCCGCCTCAGAAAGCTTTTACAGGGCCATCACGGGAATCTTGTTaGGACAGCATTCCTTGGGGA +
Preference number: 4 (lower is better)
Translates to: RQSEVSERLPPQKAFTGPSRESC*DSIPWG
Trigger: TCCCCAAGGAATGCTGTCCCAACAAGATTCCCGTGA...TGGCCCTGTAAAAGCTTTCTGAGGCGGGAGGCGCTCACTTACCTCTGACTGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR CCA 90 bp AGGCAGTCAGAGGTAAGTGAGCGCCTCCCGCCTCAGAAAGCTTTTACAGGGCCACAGAAGACCCACTTGTaGGCATTCTCTTTCTGTCCG +
Preference number: 4 (lower is better)
Translates to: RQSEVSERLPPQKAFTGPQKTHL*AFSFCP
Trigger: CGGACAGAAAGAGAATGCCCACAAGTGGGTCTTCTG...TGGCCCTGTAAAAGCTTTCTGAGGCGGGAGGCGCTCACTTACCTCTGACTGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR CCA 90 bp CGCCCCGTCCTGGACCGCCAGGAACCGAAAACCCACATGCACCCAAGAACAGGTCACCTTCATTCCCAATaGAGAAGAAATCTACACAGG +
Preference number: 4 (lower is better)
Translates to: RPVLDRQEPKTHMHPRTGHLHSQ*RRNLHR
Trigger: CCTGTGTAGATTTCTTCTCCATTGGGAATGAAGGTG...ACCTGTTCTTGGGTGCATGTGGGTTTTCGGTTCCTGGCGGTCCAGGACGGGGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR CCA 90 bp ACCCCAGCCTCGCAAGGCCTGTTGAGAAGAGAAGCTCCCTGGGAGGACACCCACGCTTGTGGTCTGTCCTaGGTTAGAGTTGTTAATATC +
Preference number: 4 (lower is better)
Translates to: TPASQGLLRREAPWEDTHACGLS*VRVVNI
Trigger: GATATTAACAACTCTAACCCAGGACAGACCACAAGC...GTGGGTGTCCTCCCAGGGAGCTTCTCTTCTCAACAGGCCTTGCGAGGCTGGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR TCA 90 bp GCAGGGGCCACGTCCTCTCTAGGAGACACCCACAGAGCCACATGTGCACGCGTGTCAATAAACAACCCTTaGGCAAATAAGTGGCATTTC +
Preference number: 4 (lower is better)
Translates to: AGATSSLGDTHRATCARVSINNP*ANKWHF
Trigger: GAAATGCCACTTATTTGCTCAAGGGTTGTTTATTGA...CACGCGTGCACATGTGGCTCTGTGGGTGTCTCCTAGAGAGGACGTGGCCCCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527886.5
CDS-3UTR GCA 90 bp CAAAATGCCATGAATGGAATCGGAAGGCGCTCCACCACCTCCAACACCCTGGCAAACCGAAAACCCACATaGACCCAAGAACAGGTGTGG +
Preference number: 4 (lower is better)
Translates to: QNAMNGIGRRSTTSNTLANRKPT*TQEQVW
Trigger: CCACACCTGTTCTTGGGTGCATGTGGGTTTTCGGTT...TGCCAGGGTGTTGGAGGTGGTGGAGCGCCTTCCGATTCCATTCATGGCATTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR GCA 90 bp CTATTCCAATTACATCACATCACAAAATGCCATGAATGGAATCGGAAGGCGCTCTCCTGCCTGGCACCCTaGAGGGTAGCGCCCAGGGAG +
Preference number: 4 (lower is better)
Translates to: LFQLHHITKCHEWNRKALSCLAP*RVAPRE
Trigger: CTCCCTGGGCGCTACCCTGCAGGGTGCCAGGCAGGA...GAGCGCCTTCCGATTCCATTCATGGCATTTTGTGATGTGATGTAATTGGAATAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR CCA 90 bp GGGGGCGACACGGGTGCTCTTTCACGGGAATCTTGTTGGGACAGCATTCCTTGGTCATGCCGTAATTCTTaGCCAACTTTGCCTGTACCA +
Preference number: 4 (lower is better)
Translates to: GGDTGALSRESCWDSIPWSCRNS*PTLPVP
Trigger: TGGTACAGGCAAAGTTGGCCAAGAATTACGGCATGA...CCAAGGAATGCTGTCCCAACAAGATTCCCGTGAAAGAGCACCCGTGTCGCCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000527886.5
CDS-3UTR CCA 90 bp GCTCTCTACAGCAAGAGCATTTTCCAGAACGGCATGAGAAGGAGAGACGCACGTGAGCGGATCACCTCCTaGTCCATGTTGGGGAACATG +
Preference number: 4 (lower is better)
Translates to: ALYSKSIFQNGMRRRDARERITS*SMLGNM
Trigger: CATGTTCCCCAACATGGACCAGGAGGTGATCCGCTC...ACGTGCGTCTCTCCTTCTCATGCCGTTCTGGAAAATGCTCTTGCTGTAGAGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR CCA 90 bp TGTCATAACCAGGTGTCACCTAAAATCTGTCCTGTAGGCCAAGATGCTACACGCGAGGCAGAGGCTCTATaGCTCCTCCCCCATCTGCAG +
Preference number: 4 (lower is better)
Translates to: CHNQVSPKICPVGQDATREAEAL*LLPHLQ
Trigger: CTGCAGATGGGGGAGGAGCCATAGAGCCTCTGCCTC...GCGTGTAGCATCTTGGCCTACAGGACAGATTTTAGGTGACACCTGGTTATGACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
3UTR CAA 72 bp CAGTGGGTTTACATCCGAAGGCCGGCGGCAAGACACTaGAACCACAAACACCAGACATGCAGGTGTCTCAAT +
Preference number: 4 (lower is better)
Translates to: QWVYIRRPAARH*NHKHQTCRCLN
Trigger: ATTGAGACACCTGCATGTCTGGTGTTTGTGGTTCAAGTGTCTTGCCGCCGGCCTTCGGATGTAAACCCACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR TCA 90 bp ACCCACAGTGTGAGGGATTGTGTGTGCCTTAAATCAACAGCTCTATTCCAATTAGCTGCTGTGTGGGCGTaGTGCGGAGGAAGTCCTGCG +
Preference number: 4 (lower is better)
Translates to: THSVRDCVCLKSTALFQLAAVWA*CGGSPA
Trigger: CGCAGGACTTCCTCCGCATCACGCCCACACAGCAGC...TAATTGGAATAGAGCTGTTGATTTAAGGCACACACAATCCCTCACACTGTGGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR GCA 90 bp CTATTCCAATTACATCACATCACAAAATGCCATGAATGGAATCGGAAGGCGCTCTCAGTCGGCCCACGGTaGCCACTGCGCCTCCGTACT +
Preference number: 4 (lower is better)
Translates to: LFQLHHITKCHEWNRKALSVGPR*PLRLRT
Trigger: AGTACGGAGGCGCAGTGGGCACCGTGGGCCGACTGA...GAGCGCCTTCCGATTCCATTCATGGCATTTTGTGATGTGATGTAATTGGAATAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR GCA 90 bp CTCTTTCACGGGAATCTTGTTGGGACAGCATTCCTTGGGGAGCGCCGGGTCGGCCATCACATCACAAAATaGCATGAATGGAATCGGAAG +
Preference number: 4 (lower is better)
Translates to: LFHGNLVGTAFLGERRVGHHITK*HEWNRK
Trigger: CTTCCGATTCCATTCATGGCATTTTGTGATGTGATG...GCCGACCCGGCGCTCCCCAAGGAATGCTGTCCCAACAAGATTCCCGTGAAAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR GCA 90 bp CCTCTCACCCCAGCCTCGCAAGGCCTGTTGAGAAGAGAAGCTCCCTGGGAGGACGGTGTCTCAATGGCATaGAGATTATTTAAAGTGCAT +
Preference number: 4 (lower is better)
Translates to: PLTPASQGLLRREAPWEDGVSMA*RLFKVH
Trigger: ATGCACTTTAAATAATCTGCATGCCATTGAGACACC...GTCCTCCCAGGGAGCTTCTCTTCTCAACAGGCCTTGCGAGGCTGGGGTGAGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR GCA 90 bp CAAAATGCCATGAATGGAATCGGAAGGCGCTCCACCACCTCCAACACCCTGGCACACAAACACCAGACATaGAGGTGTCTCAATGGCATG +
Preference number: 4 (lower is better)
Translates to: QNAMNGIGRRSTTSNTLAHKHQT*RCLNGM
Trigger: CATGCCATTGAGACACCTGCATGTCTGGTGTTTGTG...TGCCAGGGTGTTGGAGGTGGTGGAGCGCCTTCCGATTCCATTCATGGCATTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR CCA 90 bp TGTCATAACCAGGTGTCACCTAAAATCTGTCCTGTAGGCCAAGATGCTACACGCCTGCTGGTACACTGTTaGCATCAGGACCACGGGCTG +
Preference number: 4 (lower is better)
Translates to: CHNQVSPKICPVGQDATRLLVHC*HQDHGL
Trigger: CAGCCCGTGGTCCTGATGCCAACAGTGTACCAGCAG...GCGTGTAGCATCTTGGCCTACAGGACAGATTTTAGGTGACACCTGGTTATGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR CCA 90 bp GTCCGTTATCAGTGGGTTTACATCCGAAGGCCGGCGGCAAGACACTTGAACCACACAAAATGCCATGAATaGAATCGGAAGGCGCTCCAC +
Preference number: 4 (lower is better)
Translates to: VRYQWVYIRRPAARHLNHTKCHE*NRKALH
Trigger: GTGGAGCGCCTTCCGATTCCATTCATGGCATTTTGT...GTGGTTCAAGTGTCTTGCCGCCGGCCTTCGGATGTAAACCCACTGATAACGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR CCA 90 bp CTATTCCAATTACATCACATCACAAAATGCCATGAATGGAATCGGAAGGCGCTCGGACACCCACGGAGCTaGCACGAGCGCAGCAGGAGA +
Preference number: 4 (lower is better)
Translates to: LFQLHHITKCHEWNRKALGHPRS*HERSRR
Trigger: TCTCCTGCTGCGCTCGTGCCAGCTCCGTGGGTGTCC...GAGCGCCTTCCGATTCCATTCATGGCATTTTGTGATGTGATGTAATTGGAATAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR CCA 90 bp CCCCTTCCTCACTCCAGGTGTGGGTTCATTCTGCCTTCAGGCCGGAGTCTGTCAGCTTGTGGTCTGTCCTaGGTTAGAGTTGTTAATATC +
Preference number: 4 (lower is better)
Translates to: PLPHSRCGFILPSGRSLSACGLS*VRVVNI
Trigger: GATATTAACAACTCTAACCCAGGACAGACCACAAGC...TGACAGACTCCGGCCTGAAGGCAGAATGAACCCACACCTGGAGTGAGGAAGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR TCA 90 bp TGGTCCATGTTGGGGAACATGTCCTGGATGGCTTTCAGGTCCTCCTCGCTACAGAATTTACAATGTCTGTaGTGGGCACATAGCCAACGC +
Preference number: 4 (lower is better)
Translates to: WSMLGNMSWMAFRSSSLQNLQCL*WAHSQR
Trigger: GCGTTGGCTATGTGCCCATCACAGACATTGTAAATT...CTGTAGCGAGGAGGACCTGAAAGCCATCCAGGACATGTTCCCCAACATGGACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530506.5
CDS-3UTR GCA 90 bp ACCCACAGTGTGAGGGATTGTGTGTGCCTTAAATCAACAGCTCTATTCCAATTAGAAGGCAGAAACCGGTaGTGGTGGCCACACCTGGGC +
Preference number: 4 (lower is better)
Translates to: THSVRDCVCLKSTALFQLEGRNR*WWPHLG
Trigger: GCCCAGGTGTGGCCACCAGCACCGGTTTCTGCCTTC...TAATTGGAATAGAGCTGTTGATTTAAGGCACACACAATCCCTCACACTGTGGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR TCA 90 bp TGTCATAACCAGGTGTCACCTAAAATCTGTCCTGTAGGCCAAGATGCTACACGCTTTTCCAGAACGGCATaGGAAGGAGAGACGCACGTC +
Preference number: 4 (lower is better)
Translates to: CHNQVSPKICPVGQDATRFSRTA*EGETHV
Trigger: GACGTGCGTCTCTCCTTCTCATGCCGTTCTGGAAAA...GCGTGTAGCATCTTGGCCTACAGGACAGATTTTAGGTGACACCTGGTTATGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR GCA 90 bp CTATTCCAATTACATCACATCACAAAATGCCATGAATGGAATCGGAAGGCGCTCCTTGGCGCCATTGTGTaGCGTGGGCGTCTCGTACAC +
Preference number: 4 (lower is better)
Translates to: LFQLHHITKCHEWNRKALLGAIV*RGRLVH
Trigger: GTGTACGAGACGCCCACGGCACACAATGGCGCCAAG...GAGCGCCTTCCGATTCCATTCATGGCATTTTGTGATGTGATGTAATTGGAATAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000527886.5
CDS-3UTR GCA 90 bp CTATTCCAATTACATCACATCACAAAATGCCATGAATGGAATCGGAAGGCGCTCACTTGTCCTCCACCTTaGCCTGCCTCAGGGACTCCG +
Preference number: 4 (lower is better)
Translates to: LFQLHHITKCHEWNRKALTCPPP*PASGTP
Trigger: CGGAGTCCCTGAGGCAGGGCAAGGTGGAGGACAAGT...GAGCGCCTTCCGATTCCATTCATGGCATTTTGTGATGTGATGTAATTGGAATAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR GCA 90 bp AGGCAGTCAGAGGTAAGTGAGCGCCTCCCGCCTCAGAAAGCTTTTACAGGGCCACATCACATCACAAAATaGCATGAATGGAATCGGAAG +
Preference number: 4 (lower is better)
Translates to: RQSEVSERLPPQKAFTGPHHITK*HEWNRK
Trigger: CTTCCGATTCCATTCATGGCATTTTGTGATGTGATG...TGGCCCTGTAAAAGCTTTCTGAGGCGGGAGGCGCTCACTTACCTCTGACTGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR GCA 90 bp ATTTCTGACTGTCATAACCAGGTGTCACCTAAAATCTGTCCTGTAGGCCAAGATGTGTGGCAGTCTCACTaGACCCCAGCAACGCGAAGG +
Preference number: 4 (lower is better)
Translates to: ISDCHNQVSPKICPVGQDVWQSH*TPATRR
Trigger: CCTTCGCGTTGCTGGGGTGCAGTGAGACTGCCACAC...ATCTTGGCCTACAGGACAGATTTTAGGTGACACCTGGTTATGACAGTCAGAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR CCA 90 bp ACCCACAGTGTGAGGGATTGTGTGTGCCTTAAATCAACAGCTCTATTCCAATTATCCAGCGGGGATTCTTaGCGCCATTGTGTGCCGTGG +
Preference number: 4 (lower is better)
Translates to: THSVRDCVCLKSTALFQLSSGDS*RHCVPW
Trigger: CCACGGCACACAATGGCGCCAAGAATCCCCGCTGGA...TAATTGGAATAGAGCTGTTGATTTAAGGCACACACAATCCCTCACACTGTGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000527886.5
CDS-3UTR CCA 90 bp ACCCACAGTGTGAGGGATTGTGTGTGCCTTAAATCAACAGCTCTATTCCAATTATCCGGGATGGTGATGTaGGTCCAGGCAATGCGGTCG +
Preference number: 4 (lower is better)
Translates to: THSVRDCVCLKSTALFQLSGMVM*VQAMRS
Trigger: CGACCGCATTGCCTGGACCCACATCACCATCCCGGA...TAATTGGAATAGAGCTGTTGATTTAAGGCACACACAATCCCTCACACTGTGGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR CCA 90 bp ATTTCTGACTGTCATAACCAGGTGTCACCTAAAATCTGTCCTGTAGGCCAAGATGCCCCTCCGTCTGAGTaGTCGGCGTCTGCTGAACAA +
Preference number: 4 (lower is better)
Translates to: ISDCHNQVSPKICPVGQDAPPSE*SASAEQ
Trigger: TTGTTCAGCAGACGCCGACCACTCAGACGGAGGGGC...ATCTTGGCCTACAGGACAGATTTTAGGTGACACCTGGTTATGACAGTCAGAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR TCA 90 bp AATTACATCACATCACAAAATGCCATGAATGGAATCGGAAGGCGCTCCACCACCTTTTCCAGAACGGCATaGGAAGGAGAGACGCACGTC +
Preference number: 4 (lower is better)
Translates to: NYITSQNAMNGIGRRSTTFSRTA*EGETHV
Trigger: GACGTGCGTCTCTCCTTCTCATGCCGTTCTGGAAAA...GGTGGTGGAGCGCCTTCCGATTCCATTCATGGCATTTTGTGATGTGATGTAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR GCA 90 bp ACCCACAGTGTGAGGGATTGTGTGTGCCTTAAATCAACAGCTCTATTCCAATTATGTGGGTCCAGGCAATaGGGTCGTCCATGGAGAAGG +
Preference number: 4 (lower is better)
Translates to: THSVRDCVCLKSTALFQLCGSRQ*GRPWRR
Trigger: CCTTCTCCATGGACGACCGCATTGCCTGGACCCACA...TAATTGGAATAGAGCTGTTGATTTAAGGCACACACAATCCCTCACACTGTGGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR GCA 90 bp ACCCACAGTGTGAGGGATTGTGTGTGCCTTAAATCAACAGCTCTATTCCAATTATCATCGGCAAAGGGTTaGTCTCCCTCCAGCGAGGCT +
Preference number: 4 (lower is better)
Translates to: THSVRDCVCLKSTALFQLSSAKG*SPSSEA
Trigger: AGCCTCGCTGGAGGGAGAGCAACCCTTTGCCGATGA...TAATTGGAATAGAGCTGTTGATTTAAGGCACACACAATCCCTCACACTGTGGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR GCA 90 bp CTATTCCAATTACATCACATCACAAAATGCCATGAATGGAATCGGAAGGCGCTCTCATCGGCAAAGGGTTaGTCTCCCTCCAGCGAGGCT +
Preference number: 4 (lower is better)
Translates to: LFQLHHITKCHEWNRKALSSAKG*SPSSEA
Trigger: AGCCTCGCTGGAGGGAGAGCAACCCTTTGCCGATGA...GAGCGCCTTCCGATTCCATTCATGGCATTTTGTGATGTGATGTAATTGGAATAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR CCA 90 bp ACCCACAGTGTGAGGGATTGTGTGTGCCTTAAATCAACAGCTCTATTCCAATTACCACCTCCAACACCCTaGCAGAAGCAGCTGCTCTCT +
Preference number: 4 (lower is better)
Translates to: THSVRDCVCLKSTALFQLPPPTP*QKQLLS
Trigger: AGAGAGCAGCTGCTTCTGCCAGGGTGTTGGAGGTGG...TAATTGGAATAGAGCTGTTGATTTAAGGCACACACAATCCCTCACACTGTGGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
3UTR CAA 72 bp AACTTCCTCCTTCTGCATCTTCCACAGAAGACCCACTaGTGGGCATTCTCTTTCTGTCCGTTATCAGTGGGT +
Preference number: 4 (lower is better)
Translates to: NFLLLHLPQKTH*WAFSFCPLSVG
Trigger: ACCCACTGATAACGGACAGAAAGAGAATGCCCACAAGTGGGTCTTCTGTGGAAGATGCAGAAGGAGGAAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR GCA 90 bp CTATTCCAATTACATCACATCACAAAATGCCATGAATGGAATCGGAAGGCGCTCGGCAGTAGGGGTCCATaGGGGTCATGCCGTAATTCT +
Preference number: 4 (lower is better)
Translates to: LFQLHHITKCHEWNRKALGSRGP*GSCRNS
Trigger: AGAATTACGGCATGACCCGCATGGACCCCTACTGCC...GAGCGCCTTCCGATTCCATTCATGGCATTTTGTGATGTGATGTAATTGGAATAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000527886.5
CDS-3UTR CCA 90 bp CTATTCCAATTACATCACATCACAAAATGCCATGAATGGAATCGGAAGGCGCTCCCTCCTGGTCCATGTTaGGGAACATGTCCTGGATGG +
Preference number: 4 (lower is better)
Translates to: LFQLHHITKCHEWNRKALPPGPC*GTCPGW
Trigger: CCATCCAGGACATGTTCCCCAACATGGACCAGGAGG...GAGCGCCTTCCGATTCCATTCATGGCATTTTGTGATGTGATGTAATTGGAATAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR CCA 90 bp ACCCACAGTGTGAGGGATTGTGTGTGCCTTAAATCAACAGCTCTATTCCAATTACCTCCTGGTCCATGTTaGGGAACATGTCCTGGATGG +
Preference number: 4 (lower is better)
Translates to: THSVRDCVCLKSTALFQLPPGPC*GTCPGW
Trigger: CCATCCAGGACATGTTCCCCAACATGGACCAGGAGG...TAATTGGAATAGAGCTGTTGATTTAAGGCACACACAATCCCTCACACTGTGGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR CCA 90 bp ACCCACAGTGTGAGGGATTGTGTGTGCCTTAAATCAACAGCTCTATTCCAATTAGAGCGGATCACCTCCTaGTCCATGTTGGGGAACATG +
Preference number: 4 (lower is better)
Translates to: THSVRDCVCLKSTALFQLERITS*SMLGNM
Trigger: CATGTTCCCCAACATGGACCAGGAGGTGATCCGCTC...TAATTGGAATAGAGCTGTTGATTTAAGGCACACACAATCCCTCACACTGTGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR CCA 90 bp AATTACATCACATCACAAAATGCCATGAATGGAATCGGAAGGCGCTCCACCACCTCTGTCCGTTATCAGTaGGTTTACATCCGAAGGCCG +
Preference number: 4 (lower is better)
Translates to: NYITSQNAMNGIGRRSTTSVRYQ*VYIRRP
Trigger: CGGCCTTCGGATGTAAACCCACTGATAACGGACAGA...GGTGGTGGAGCGCCTTCCGATTCCATTCATGGCATTTTGTGATGTGATGTAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR TCA 90 bp AATTACATCACATCACAAAATGCCATGAATGGAATCGGAAGGCGCTCCACCACCCATCACAAAATGCCATaGATGGAATCGGAAGGCGCT +
Preference number: 4 (lower is better)
Translates to: NYITSQNAMNGIGRRSTTHHKMP*MESEGA
Trigger: AGCGCCTTCCGATTCCATTCATGGCATTTTGTGATG...GGTGGTGGAGCGCCTTCCGATTCCATTCATGGCATTTTGTGATGTGATGTAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR TCA 90 bp ATTTCTGACTGTCATAACCAGGTGTCACCTAAAATCTGTCCTGTAGGCCAAGATGTTAGGGCAAGGGCGTaGGTTTTCGTCTGGGAAGTT +
Preference number: 4 (lower is better)
Translates to: ISDCHNQVSPKICPVGQDVRARA*VFVWEV
Trigger: AACTTCCCAGACGAAAACTCACGCCCTTGCCCTAAC...ATCTTGGCCTACAGGACAGATTTTAGGTGACACCTGGTTATGACAGTCAGAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR GCA 90 bp ATTTCTGACTGTCATAACCAGGTGTCACCTAAAATCTGTCCTGTAGGCCAAGATGGTCCATGCGGGTCATaGCGTAATTCTTGGCCAACT +
Preference number: 4 (lower is better)
Translates to: ISDCHNQVSPKICPVGQDGPCGS*RNSWPT
Trigger: AGTTGGCCAAGAATTACGGCATGACCCGCATGGACC...ATCTTGGCCTACAGGACAGATTTTAGGTGACACCTGGTTATGACAGTCAGAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000527886.5
CDS-3UTR CCA 90 bp CTATTCCAATTACATCACATCACAAAATGCCATGAATGGAATCGGAAGGCGCTCCAATGCGGTCGTCCATaGAGAAGGCTCTCTCATCGA +
Preference number: 4 (lower is better)
Translates to: LFQLHHITKCHEWNRKALQCGRP*RRLSHR
Trigger: TCGATGAGAGAGCCTTCTCCATGGACGACCGCATTG...GAGCGCCTTCCGATTCCATTCATGGCATTTTGTGATGTGATGTAATTGGAATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000527886.5
CDS-3UTR CCA 90 bp ATTTCTGACTGTCATAACCAGGTGTCACCTAAAATCTGTCCTGTAGGCCAAGATTCCTCACTCCAGGTGTaGGTTCATTCTGCCTTCAGG +
Preference number: 4 (lower is better)
Translates to: ISDCHNQVSPKICPVGQDSSLQV*VHSAFR
Trigger: CCTGAAGGCAGAATGAACCCACACCTGGAGTGAGGA...ATCTTGGCCTACAGGACAGATTTTAGGTGACACCTGGTTATGACAGTCAGAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR GCA 90 bp ACCCACAGTGTGAGGGATTGTGTGTGCCTTAAATCAACAGCTCTATTCCAATTAAATCATGCACAGTGCTaGCTCTATCACCTCTCACCC +
Preference number: 4 (lower is better)
Translates to: THSVRDCVCLKSTALFQLNHAQC*LYHLSP
Trigger: GGGTGAGAGGTGATAGAGGCAGCACTGTGCATGATT...TAATTGGAATAGAGCTGTTGATTTAAGGCACACACAATCCCTCACACTGTGGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR GCA 90 bp GCTCTCTACAGCAAGAGCATTTTCCAGAACGGCATGAGAAGGAGAGACGCACGTGGTGTCTCAATGGCATaGAGATTATTTAAAGTGCAT +
Preference number: 4 (lower is better)
Translates to: ALYSKSIFQNGMRRRDARGVSMA*RLFKVH
Trigger: ATGCACTTTAAATAATCTGCATGCCATTGAGACACC...ACGTGCGTCTCTCCTTCTCATGCCGTTCTGGAAAATGCTCTTGCTGTAGAGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR CCA 90 bp CTATTCCAATTACATCACATCACAAAATGCCATGAATGGAATCGGAAGGCGCTCCAGAAGACCCACTTGTaGGCATTCTCTTTCTGTCCG +
Preference number: 4 (lower is better)
Translates to: LFQLHHITKCHEWNRKALQKTHL*AFSFCP
Trigger: CGGACAGAAAGAGAATGCCCACAAGTGGGTCTTCTG...GAGCGCCTTCCGATTCCATTCATGGCATTTTGTGATGTGATGTAATTGGAATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR CCA 90 bp ATTTCTGACTGTCATAACCAGGTGTCACCTAAAATCTGTCCTGTAGGCCAAGATAAGAAAACTAAGAGATaGCGGCAAGCGTGGTCATCG +
Preference number: 4 (lower is better)
Translates to: ISDCHNQVSPKICPVGQDKKTKR*RQAWSS
Trigger: CGATGACCACGCTTGCCGCCATCTCTTAGTTTTCTT...ATCTTGGCCTACAGGACAGATTTTAGGTGACACCTGGTTATGACAGTCAGAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR GCA 90 bp TGTCATAACCAGGTGTCACCTAAAATCTGTCCTGTAGGCCAAGATGCTACACGCGGTGTCTCAATGGCATaGAGATTATTTAAAGTGCAT +
Preference number: 4 (lower is better)
Translates to: CHNQVSPKICPVGQDATRGVSMA*RLFKVH
Trigger: ATGCACTTTAAATAATCTGCATGCCATTGAGACACC...GCGTGTAGCATCTTGGCCTACAGGACAGATTTTAGGTGACACCTGGTTATGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR CCA 90 bp ACCCACAGTGTGAGGGATTGTGTGTGCCTTAAATCAACAGCTCTATTCCAATTATCATGCCGTAATTCTTaGCCAACTTTGCCTGTACCA +
Preference number: 4 (lower is better)
Translates to: THSVRDCVCLKSTALFQLSCRNS*PTLPVP
Trigger: TGGTACAGGCAAAGTTGGCCAAGAATTACGGCATGA...TAATTGGAATAGAGCTGTTGATTTAAGGCACACACAATCCCTCACACTGTGGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000527886.5
CDS-3UTR TCA 90 bp AATTACATCACATCACAAAATGCCATGAATGGAATCGGAAGGCGCTCCACCACCAAAGTGCATCACTTGTaGGAAGCTTCTCAAATTTCT +
Preference number: 4 (lower is better)
Translates to: NYITSQNAMNGIGRRSTTKVHHL*EASQIS
Trigger: AGAAATTTGAGAAGCTTCTCACAAGTGATGCACTTT...GGTGGTGGAGCGCCTTCCGATTCCATTCATGGCATTTTGTGATGTGATGTAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS CCA 90 bp GCGTCCAGCTGGACGGTGGTCGCCATGGTGCTGCGGCGGCCCCCGTaGCTCGCCGACCCGACAGTGACGCGCCGGGCGACCTCCTGCGCC +
Preference number: 5 (lower is better)
Translates to: ASSWTVVAMVLRRPP*LADPTVTRRATSCA
Trigger: GGCGCAGGAGGTCGCCCGGCGCGTCACTGTCGGGTCGGCGAGCCACGGGGGCCGCCGCAGCACCATGGCGACCACCGTCCAGCTGGACGC
78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263646.11
CDS GCA 90 bp CCCCCGTGGCTCGCCGACCCGACAGTGACGCGCCGGGCGACCTCCTaGGCCCCCGCCGGAGCCTGCGACGGAGACAGTTGTCACCTCGAG +
Preference number: 5 (lower is better)
Translates to: PPWLADPTVTRRATS*APAGACDGDSCHLE
Trigger: CTCGAGGTGACAACTGTCTCCGTCGCAGGCTCCGGCGGGGGCGCAGGAGGTCGCCCGGCGCGTCACTGTCGGGTCGGCGAGCCACGGGGG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527085.1
ENST00000527938.5
ENST00000530541.1
ENST00000532551.1
CDS GCA 90 bp ACCGTGATGTTCAGTCGGCCCACGGTGCCCACTGCGCCTCCGTACTaGAGCTGCTGGGCCGCCTGGGCGTCCAGCTGGACGGTGGTCGCC +
Preference number: 5 (lower is better)
Translates to: TVMFSRPTVPTAPPY*SCWAAWASSWTVVA
Trigger: GGCGACCACCGTCCAGCTGGACGCCCAGGCGGCCCAGCAGCTGCAGTACGGAGGCGCAGTGGGCACCGTGGGCCGACTGAACATCACGGT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263646.11
CDS-3UTR CAA 90 bp GGACGGCAGCCTCCGGCGGGCGAAGGACCCGGCTTCAGATGCCCGCTGGCTGGCCACTTGTCCTCCACCTaGCCCTGCCTCAGGGACTCC +
Preference number: 5 (lower is better)
Translates to: GRQPPAGEGPGFRCPLAGHLSST*PCLRDS
Trigger: GGAGTCCCTGAGGCAGGGCAAGGTGGAGGACAAGTG...GCCAGCCAGCGGGCATCTGAAGCCGGGTCCTTCGCCCGCCGGAGGCTGCCGTCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR CAA 90 bp GCCCGCTGGCTGGCAATCAGGCAGAGCCTGGCCAACCGTGCCAGGCCCCCTTCCTTGGGACAGCATTCCTaGGGGAGCGCCGGGTCGGCG +
Preference number: 5 (lower is better)
Translates to: ARWLAIRQSLANRARPPSLGQHS*GSAGSA
Trigger: CGCCGACCCGGCGCTCCCCAAGGAATGCTGTCCCAA...GGAAGGGGGCCTGGCACGGTTGGCCAGGCTCTGCCTGATTGCCAGCCAGCGGGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS TCA 90 bp CCGCCTGGGCGTCCAGCTGGACCTGCCGCTGCTGCTGTGTGGGCGTaGTGCGGAGGAAGTCCTGCGGGAGCTCACCGATGTACACCGGCC +
Preference number: 5 (lower is better)
Translates to: PPGRPAGPAAAAVWA*CGGSPAGAHRCTPA
Trigger: GGCCGGTGTACATCGGTGAGCTCCCGCAGGACTTCCTCCGCATCACGCCCACACAGCAGCAGCGGCAGGTCCAGCTGGACGCCCAGGCGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317204.11
ENST00000525159.5
ENST00000527638.1
ENST00000527746.5
ENST00000527938.5
ENST00000532551.1
CDS GCA 90 bp ATGTTCAGTCGGCCCACGGTGCCCACTGCGCCTCCGTACTGCAGCTaGTGGGCCGCCTGGGCGTCCAGCTGGACGGTGGTCGCCATGGTG +
Preference number: 5 (lower is better)
Translates to: MFSRPTVPTAPPYCS*WAAWASSWTVVAMV
Trigger: CACCATGGCGACCACCGTCCAGCTGGACGCCCAGGCGGCCCAGCAGCTGCAGTACGGAGGCGCAGTGGGCACCGTGGGCCGACTGAACAT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263646.11
CDS CCA 90 bp AGCCAGTCGGGGGAGGGTGTGGGTGGTCACAGGGACGTGTGGGCGTaGGGTCCAGAGGCCTCTGAGGGAGCACTGTGGGTCCCTCGCTGC +
Preference number: 5 (lower is better)
Translates to: SQSGEGVGGHRDVWA*GPEASEGALWVPRC
Trigger: GCAGCGAGGGACCCACAGTGCTCCCTCAGAGGCCTCTGGACCCCACGCCCACACGTCCCTGTGACCACCCACACCCTCCCCCGACTGGCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527085.1
CDS-3UTR CAA 90 bp GGACGGCAGCCTCCGGCGGGCGAAGGACCCGGCTTCAGATGCCCGCTGGCTGGCCCTGCTGGTACACTGTaGGCATCAGGACCACGGGCT +
Preference number: 5 (lower is better)
Translates to: GRQPPAGEGPGFRCPLAGPAGTL*ASGPRA
Trigger: AGCCCGTGGTCCTGATGCCAACAGTGTACCAGCAGG...GCCAGCCAGCGGGCATCTGAAGCCGGGTCCTTCGCCCGCCGGAGGCTGCCGTCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR CAA 90 bp GGACGGCAGCCTCCGGCGGGCGAAGGACCCGGCTTCAGATGCCCGCTGGCTGGCTTGATGGCGGCATCCTaGTTCCCTCGCTGGGCTTCC +
Preference number: 5 (lower is better)
Translates to: GRQPPAGEGPGFRCPLAGLMAAS*FPRWAS
Trigger: GGAAGCCCAGCGAGGGAACAAGGATGCCGCCATCAA...GCCAGCCAGCGGGCATCTGAAGCCGGGTCCTTCGCCCGCCGGAGGCTGCCGTCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR CAA 90 bp GCGCAGCAGGAGAGACGGACGGCAGCCTCCGGCGGGCGAAGGACCCGGCTTCAGGTCATCGGCAAAGGGTaGCTCTCCCTCCAGCGAGGC +
Preference number: 5 (lower is better)
Translates to: AQQERRTAASGGRRTRLQVIGKG*LSLQRG
Trigger: GCCTCGCTGGAGGGAGAGCAACCCTTTGCCGATGAC...CTGAAGCCGGGTCCTTCGCCCGCCGGAGGCTGCCGTCCGTCTCTCCTGCTGCGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS TCA 90 bp CCGAGGGCACGGCTGTCCCGTCCACGCCAACCCTCGCCGCACAGCTaGACTCTCCCCTCCTGTGCCCACATCTCTGGACTGCCAGGTCCT +
Preference number: 5 (lower is better)
Translates to: PRARLSRPRQPSPHS*TLPSCAHISGLPGP
Trigger: AGGACCTGGCAGTCCAGAGATGTGGGCACAGGAGGGGAGAGTTCAGCTGTGCGGCGAGGGTTGGCGTGGACGGGACAGCCGTGCCCTCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528719.1
CDS TCA 90 bp CCGCCTGGGCGTCCAGCTGGACCTGCCGCTGCTGCTGTGTGGGCGTaGTGCGGAGGAAGTCCTGCGGGAGCTCACCGATGTACACCTGAC +
Preference number: 5 (lower is better)
Translates to: PPGRPAGPAAAAVWA*CGGSPAGAHRCTPD
Trigger: GTCAGGTGTACATCGGTGAGCTCCCGCAGGACTTCCTCCGCATCACGCCCACACAGCAGCAGCGGCAGGTCCAGCTGGACGCCCAGGCGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527886.5
CDS-3UTR CAA 90 bp GGACAGCATTCCTTGGGGAGCGCCGGGTCGGCGTGTCCAAAGAGCGGGGGCAAATTGGGACAGCATTCCTaGGGGAGCGCCGGGTCGGCG +
Preference number: 5 (lower is better)
Translates to: GQHSLGSAGSACPKSGGKLGQHS*GSAGSA
Trigger: CGCCGACCCGGCGCTCCCCAAGGAATGCTGTCCCAA...TTTGCCCCCGCTCTTTGGACACGCCGACCCGGCGCTCCCCAAGGAATGCTGTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
ENST00000530506.5
CDS GCA 90 bp CCGCGTAGCCCAGGCGCAGTCGGCAGTAGGGGTCCATGCGGGTCATaGCGTAATTCTTGGCCAACTTTGCCTCTGAGGGCACGGCCGCCC +
Preference number: 5 (lower is better)
Translates to: PRSPGAVGSRGPCGS*RNSWPTLPLRARPP
Trigger: GGGCGGCCGTGCCCTCAGAGGCAAAGTTGGCCAAGAATTACGGCATGACCCGCATGGACCCCTACTGCCGACTGCGCCTGGGCTACGCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528719.1
CDS-3UTR CAA 90 bp TGGACGGGGCGGCACAGAAGTCCACGGGAGGGGGCGACACGGGTGCTCTTTCACCACTTGTCCTCCACCTaGCCCTGCCTCAGGGACTCC +
Preference number: 5 (lower is better)
Translates to: WTGRHRSPREGATRVLFHHLSST*PCLRDS
Trigger: GGAGTCCCTGAGGCAGGGCAAGGTGGAGGACAAGTG...GTGAAAGAGCACCCGTGTCGCCCCCTCCCGTGGACTTCTGTGCCGCCCCGTCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
ENST00000530506.5
CDS GCA 90 bp CCCTGCCTCCCGCTCAGGCTGTACCACTTGTCCTCCACCTTGCCCTaGCTCAGGGACTCCGGGATGGTGATGTGGGTCCAGGCAATGCGG +
Preference number: 5 (lower is better)
Translates to: PCLPLRLYHLSSTLP*LRDSGMVMWVQAMR
Trigger: CCGCATTGCCTGGACCCACATCACCATCCCGGAGTCCCTGAGGCAGGGCAAGGTGGAGGACAAGTGGTACAGCCTGAGCGGGAGGCAGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
ENST00000528719.1
ENST00000530506.5
ENST00000530541.1
CDS CCA 90 bp CACGTGGGGGACAGACAGGCGACTCATGTCCCGGAGACAGCAGCATaGAGAAGCCAGTCGGGGGAGGGTGTGGGTGGTCACAGGGACGTG +
Preference number: 5 (lower is better)
Translates to: HVGDRQATHVPETAA*RSQSGEGVGGHRDV
Trigger: CACGTCCCTGTGACCACCCACACCCTCCCCCGACTGGCTTCTCCATGCTGCTGTCTCCGGGACATGAGTCGCCTGTCTGTCCCCCACGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000527085.1
CDS-3UTR CAA 90 bp TTGATGGCGGCATCCTTGTTCCCTCGCTGGGCTTCCAGCACGGAGCGGATCACCCTGCGACGGAGACAGTaGTCACCTCGAGGCCGCCGC +
Preference number: 5 (lower is better)
Translates to: LMAASLFPRWASSTERITLRRRQ*SPRGRR
Trigger: GCGGCGGCCTCGAGGTGACAACTGTCTCCGTCGCAG...GGTGATCCGCTCCGTGCTGGAAGCCCAGCGAGGGAACAAGGATGCCGCCATCAA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527938.5
CDS-3UTR CAA 90 bp GGGACAGCATTCCTTGGGGAGCGCCGGGTCGGCGTGTCCAAAGAGCGGGGGCAACTCAGGCTGTACCACTaGTCCTCCACCTTGCCCTGC +
Preference number: 5 (lower is better)
Translates to: GTAFLGERRVGVSKERGQLRLYH*SSTLPC
Trigger: GCAGGGCAAGGTGGAGGACAAGTGGTACAGCCTGAG...TTGCCCCCGCTCTTTGGACACGCCGACCCGGCGCTCCCCAAGGAATGCTGTCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
ENST00000530506.5
CDS-3UTR CAA 90 bp TGGACGGGGCGGCACAGAAGTCCACGGGAGGGGGCGACACGGGTGCTCTTTCACCTCAGGCTGTACCACTaGTCCTCCACCTTGCCCTGC +
Preference number: 5 (lower is better)
Translates to: WTGRHRSPREGATRVLFHLRLYH*SSTLPC
Trigger: GCAGGGCAAGGTGGAGGACAAGTGGTACAGCCTGAG...GTGAAAGAGCACCCGTGTCGCCCCCTCCCGTGGACTTCTGTGCCGCCCCGTCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
ENST00000530506.5
CDS-3UTR CAA 90 bp TGGACGGGGCGGCACAGAAGTCCACGGGAGGGGGCGACACGGGTGCTCTTTCACCCTGCTGGTACACTGTaGGCATCAGGACCACGGGCT +
Preference number: 5 (lower is better)
Translates to: WTGRHRSPREGATRVLFHPAGTL*ASGPRA
Trigger: AGCCCGTGGTCCTGATGCCAACAGTGTACCAGCAGG...GTGAAAGAGCACCCGTGTCGCCCCCTCCCGTGGACTTCTGTGCCGCCCCGTCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
ENST00000530506.5
CDS-3UTR CAA 90 bp GGAGCGCCGGGTCGGCGTGTCCAAAGAGCGGGGGCAAAACGGCATCGAGGCAGACCTGCTGGTACACTGTaGGCATCAGGACCACGGGCT +
Preference number: 5 (lower is better)
Translates to: GAPGRRVQRAGAKRHRGRPAGTL*ASGPRA
Trigger: AGCCCGTGGTCCTGATGCCAACAGTGTACCAGCAGG...TCTGCCTCGATGCCGTTTTGCCCCCGCTCTTTGGACACGCCGACCCGGCGCTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
ENST00000530506.5
CDS-3UTR CAA 90 bp GCCTCGCAAGGCCTGTTGAGAAGAGAAGCTCCCTGGGAGGACACCCACGGAGCTTTGGGACAGCATTCCTaGGGGAGCGCCGGGTCGGCG +
Preference number: 5 (lower is better)
Translates to: ASQGLLRREAPWEDTHGALGQHS*GSAGSA
Trigger: CGCCGACCCGGCGCTCCCCAAGGAATGCTGTCCCAA...AGCTCCGTGGGTGTCCTCCCAGGGAGCTTCTCTTCTCAACAGGCCTTGCGAGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR CAA 90 bp GACCGCCAGGAACCGAAAACCCACATGCACCCAAGAACAGGTGTGGACGGGGCGTTGGGACAGCATTCCTaGGGGAGCGCCGGGTCGGCG +
Preference number: 5 (lower is better)
Translates to: DRQEPKTHMHPRTGVDGALGQHS*GSAGSA
Trigger: CGCCGACCCGGCGCTCCCCAAGGAATGCTGTCCCAA...CGCCCCGTCCACACCTGTTCTTGGGTGCATGTGGGTTTTCGGTTCCTGGCGGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
ENST00000530506.5
CDS GCA 90 bp GCGTGGGGTCCAGAGGCCTCTGAGGGAGCACTGTGGGTCCCTCGCTaGTCTGGATCCTGGTTGTCCCGGTATTTGAAGGCGTCCAGCGCT +
Preference number: 5 (lower is better)
Translates to: AWGPEASEGALWVPR*SGSWLSRYLKASSA
Trigger: AGCGCTGGACGCCTTCAAATACCGGGACAACCAGGATCCAGAGCAGCGAGGGACCCACAGTGCTCCCTCAGAGGCCTCTGGACCCCACGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527085.1
CDS GCA 90 bp GCGGTGGCTGCAGCGGAGTCTCCCGCAAACGTCCCGAGATCTCACTaGAGAAGGCAGGGGTCCACACGGTACTCCTCGATACTCCTCGCG +
Preference number: 5 (lower is better)
Translates to: AVAAAESPANVPRSH*RRQGSTRYSSILLA
Trigger: CGCGAGGAGTATCGAGGAGTACCGTGTGGACCCCTGCCTTCTGCAGTGAGATCTCGGGACGTTTGCGGGAGACTCCGCTGCAGCCACCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530821.1
CDS GCA 90 bp TCTCGTACACCGCGTAGCCCAGGCGCAGTCGGCAGTAGGGGTCCATaGGGGTCATGCCGTAATTCTTGGCCAACTTTGCCGGCCCGCGCT +
Preference number: 5 (lower is better)
Translates to: SRTPRSPGAVGSRGP*GSCRNSWPTLPARA
Trigger: AGCGCGGGCCGGCAAAGTTGGCCAAGAATTACGGCATGACCCGCATGGACCCCTACTGCCGACTGCGCCTGGGCTACGCGGTGTACGAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000530506.5
ENST00000530541.1
CDS-3UTR CAA 90 bp ACCTCTCACCCCAGCCTCGCAAGGCCTGTTGAGAAGAGAAGCTCCCTGGGAGGACTGCGACGGAGACAGTaGTCACCTCGAGGCCGCCGC +
Preference number: 5 (lower is better)
Translates to: TSHPSLARPVEKRSSLGGLRRRQ*SPRGRR
Trigger: GCGGCGGCCTCGAGGTGACAACTGTCTCCGTCGCAG...TCCTCCCAGGGAGCTTCTCTTCTCAACAGGCCTTGCGAGGCTGGGGTGAGAGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
CDS-3UTR CAA 90 bp CTCCCCCATCTGCAGCAGGGAGTTGATGGCGGCATCCTTGTTCCCTCGCTGGGCCACTTGTCCTCCACCTaGCCCTGCCTCAGGGACTCC +
Preference number: 5 (lower is better)
Translates to: LPHLQQGVDGGILVPSLGHLSST*PCLRDS
Trigger: GGAGTCCCTGAGGCAGGGCAAGGTGGAGGACAAGTG...GCCCAGCGAGGGAACAAGGATGCCGCCATCAACTCCCTGCTGCAGATGGGGGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000530506.5
CDS-3UTR CAA 90 bp TGTTGGGACAGCATTCCTTGGGGAGCGCCGGGTCGGCGTGTCCAAAGAGCGGGGTTGATGGCGGCATCCTaGTTCCCTCGCTGGGCTTCC +
Preference number: 5 (lower is better)
Translates to: CWDSIPWGAPGRRVQRAGLMAAS*FPRWAS
Trigger: GGAAGCCCAGCGAGGGAACAAGGATGCCGCCATCAA...CCCCGCTCTTTGGACACGCCGACCCGGCGCTCCCCAAGGAATGCTGTCCCAACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
ENST00000530506.5
CDS GCA 90 bp GCAGTGGATGACCTTATTCCAGCGGGGATTCTTGGCGCCATTGTGTaGCGTGGGCGTCTCGTACACCGCGTAGCCCAGGCGCAGTCGGCA +
Preference number: 5 (lower is better)
Translates to: AVDDLIPAGILGAIV*RGRLVHRVAQAQSA
Trigger: TGCCGACTGCGCCTGGGCTACGCGGTGTACGAGACGCCCACGGCACACAATGGCGCCAAGAATCCCCGCTGGAATAAGGTCATCCACTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000527746.5
ENST00000527886.5
ENST00000528719.1
ENST00000530506.5
ENST00000530541.1
CDS CCA 90 bp CCGATGTACACCTCTACCAAGGAGGCCTCTCTGACGGCACCGCGGTaGCTGCAGCGGAGTCTCCCGCAAACGTCCCGAGATCTCACTGCA +
Preference number: 5 (lower is better)
Translates to: PMYTSTKEASLTAPR*LQRSLPQTSRDLTA
Trigger: TGCAGTGAGATCTCGGGACGTTTGCGGGAGACTCCGCTGCAGCCACCGCGGTGCCGTCAGAGAGGCCTCCTTGGTAGAGGTGTACATCGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530821.1
CDS-3UTR CAA 90 bp ACCCACATGCACCCAAGAACAGGTGTGGACGGGGCGGCACAGAAGTCCACGGGAGGATTCTTGGCGCCATaGTGTGCCGTGGGCGTCTCG +
Preference number: 5 (lower is better)
Translates to: THMHPRTGVDGAAQKSTGGFLAP*CAVGVS
Trigger: CGAGACGCCCACGGCACACAATGGCGCCAAGAATCC...TCCCGTGGACTTCTGTGCCGCCCCGTCCACACCTGTTCTTGGGTGCATGTGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000527886.5
ENST00000530506.5
CDS-3UTR CAA 90 bp CCCACATGCACCCAAGAACAGGTGTGGACGGGGCGGCACAGAAGTCCACGGGAGCTCAGGCTGTACCACTaGTCCTCCACCTTGCCCTGC +
Preference number: 5 (lower is better)
Translates to: PTCTQEQVWTGRHRSPRELRLYH*SSTLPC
Trigger: GCAGGGCAAGGTGGAGGACAAGTGGTACAGCCTGAG...CTCCCGTGGACTTCTGTGCCGCCCCGTCCACACCTGTTCTTGGGTGCATGTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
ENST00000530506.5
CDS-3UTR CAA 90 bp GTTGGGACAGCATTCCTTGGGGAGCGCCGGGTCGGCGTGTCCAAAGAGCGGGGGATCTGCAGCAGGGAGTaGATGGCGGCATCCTTGTTC +
Preference number: 5 (lower is better)
Translates to: VGTAFLGERRVGVSKERGICSRE*MAASLF
Trigger: GAACAAGGATGCCGCCATCAACTCCCTGCTGCAGAT...CCCCCGCTCTTTGGACACGCCGACCCGGCGCTCCCCAAGGAATGCTGTCCCAAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
ENST00000530506.5
CDS-3UTR CAA 90 bp CCACATGCACCCAAGAACAGGTGTGGACGGGGCGGCACAGAAGTCCACGGGAGGGGACGCCCCTGCTTATaGGAAACGCATGCCTGGGCA +
Preference number: 5 (lower is better)
Translates to: PHAPKNRCGRGGTEVHGRGRPCL*ETHAWA
Trigger: TGCCCAGGCATGCGTTTCCAATAAGCAGGGGCGTCC...CCTCCCGTGGACTTCTGTGCCGCCCCGTCCACACCTGTTCTTGGGTGCATGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000530506.5
CDS GCA 90 bp GCTGTGTTGGCAGGTGTGTCCCCACGGCAGCCACGCTCAGCCACGTaGAGCCTCCATAATAGCTGGCACGTCCCTCTCACCTCATCGAAG +
Preference number: 5 (lower is better)
Translates to: AVLAGVSPRQPRSAT*SLHNSWHVPLTSSK
Trigger: CTTCGATGAGGTGAGAGGGACGTGCCAGCTATTATGGAGGCTGCACGTGGCTGAGCGTGGCTGCCGTGGGGACACACCTGCCAACACAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527746.5
CDS CCA 90 bp GAGGCCTCTGAGGGAGCACTGTGGGTCCCTCGCTGCTCTGGATCCTaGTTGTCCCGGTATTTGAAGGCGTCCAGCGCTCCATCTCCTTGC +
Preference number: 5 (lower is better)
Translates to: EASEGALWVPRCSGS*LSRYLKASSAPSPC
Trigger: GCAAGGAGATGGAGCGCTGGACGCCTTCAAATACCGGGACAACCAGGATCCAGAGCAGCGAGGGACCCACAGTGCTCCCTCAGAGGCCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527085.1
CDS-3UTR CAA 90 bp TCCCCCATCTGCAGCAGGGAGTTGATGGCGGCATCCTTGTTCCCTCGCTGGGCTTTCCAGCGGGGATTCTaGGCGCCATTGTGTGCCGTG +
Preference number: 5 (lower is better)
Translates to: SPICSRELMAASLFPRWAFQRGF*APLCAV
Trigger: CACGGCACACAATGGCGCCAAGAATCCCCGCTGGAA...AGCCCAGCGAGGGAACAAGGATGCCGCCATCAACTCCCTGCTGCAGATGGGGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000530506.5
CDS-3UTR CAA 90 bp GGACTCAGACGGGCTCCAAGCAGGGTACAGCCCCAACGCGTCAGTGTCAGCTTCCCTGCTGGTACACTGTaGGCATCAGGACCACGGGCT +
Preference number: 5 (lower is better)
Translates to: GLRRAPSRVQPQRVSVSFPAGTL*ASGPRA
Trigger: AGCCCGTGGTCCTGATGCCAACAGTGTACCAGCAGG...GAAGCTGACACTGACGCGTTGGGGCTGTACCCTGCTTGGAGCCCGTCTGAGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530506.5
CDS-3UTR CAA 90 bp TGTTCCCTCGCTGGGCTTCCAGCACGGAGCGGATCACCTCCTGGTCCATGTTGGTTGATGGCGGCATCCTaGTTCCCTCGCTGGGCTTCC +
Preference number: 5 (lower is better)
Translates to: CSLAGLPARSGSPPGPCWLMAAS*FPRWAS
Trigger: GGAAGCCCAGCGAGGGAACAAGGATGCCGCCATCAA...CCAACATGGACCAGGAGGTGATCCGCTCCGTGCTGGAAGCCCAGCGAGGGAACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527938.5
ENST00000530506.5
CDS-3UTR CAA 90 bp AGGCAGTCAGAGGTAAGTGAGCGCCTCCCGCCTCAGAAAGCTTTTACAGGGCCATTGGGACAGCATTCCTaGGGGAGCGCCGGGTCGGCG +
Preference number: 5 (lower is better)
Translates to: RQSEVSERLPPQKAFTGPLGQHS*GSAGSA
Trigger: CGCCGACCCGGCGCTCCCCAAGGAATGCTGTCCCAA...TGGCCCTGTAAAAGCTTTCTGAGGCGGGAGGCGCTCACTTACCTCTGACTGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR CAA 90 bp TGGACGGGGCGGCACAGAAGTCCACGGGAGGGGGCGACACGGGTGCTCTTTCACTTCACGGGAATCTTGTaGGGACAGCATTCCTTGGGG +
Preference number: 5 (lower is better)
Translates to: WTGRHRSPREGATRVLFHFTGIL*GQHSLG
Trigger: CCCCAAGGAATGCTGTCCCAACAAGATTCCCGTGAA...GTGAAAGAGCACCCGTGTCGCCCCCTCCCGTGGACTTCTGTGCCGCCCCGTCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
ENST00000530506.5
CDS-3UTR CAA 90 bp GTTGGGACAGCATTCCTTGGGGAGCGCCGGGTCGGCGTGTCCAAAGAGCGGGGGTTCACGGGAATCTTGTaGGGACAGCATTCCTTGGGG +
Preference number: 5 (lower is better)
Translates to: VGTAFLGERRVGVSKERGFTGIL*GQHSLG
Trigger: CCCCAAGGAATGCTGTCCCAACAAGATTCCCGTGAA...CCCCCGCTCTTTGGACACGCCGACCCGGCGCTCCCCAAGGAATGCTGTCCCAAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
ENST00000530506.5
CDS-3UTR CAA 90 bp GCCCGCTGGCTGGCAATCAGGCAGAGCCTGGCCAACCGTGCCAGGCCCCCTTCCTCTTTCACGGGAATCTaGTTGGGACAGCATTCCTTG +
Preference number: 5 (lower is better)
Translates to: ARWLAIRQSLANRARPPSSFTGI*LGQHSL
Trigger: CAAGGAATGCTGTCCCAACAAGATTCCCGTGAAAGA...GGAAGGGGGCCTGGCACGGTTGGCCAGGCTCTGCCTGATTGCCAGCCAGCGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS GCA 90 bp TCTCGTACACCGCGTAGCCCAGGCGCAGTCGGCAGTAGGGGTCCATaGGGGTCATGCCGTAATTCTTGGCCAACTTTGCCTGTACCACCG +
Preference number: 5 (lower is better)
Translates to: SRTPRSPGAVGSRGP*GSCRNSWPTLPVPP
Trigger: CGGTGGTACAGGCAAAGTTGGCCAAGAATTACGGCATGACCCGCATGGACCCCTACTGCCGACTGCGCCTGGGCTACGCGGTGTACGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000527746.5
ENST00000527886.5
CDS GCA 90 bp TCTCGTACACCGCGTAGCCCAGGCGCAGTCGGCAGTAGGGGTCCATaGGGGTCATGCCGTAATTCTTGGCCAACTTTGCCTCTGAGGGCA +
Preference number: 5 (lower is better)
Translates to: SRTPRSPGAVGSRGP*GSCRNSWPTLPLRA
Trigger: TGCCCTCAGAGGCAAAGTTGGCCAAGAATTACGGCATGACCCGCATGGACCCCTACTGCCGACTGCGCCTGGGCTACGCGGTGTACGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528719.1
CDS-3UTR CAA 90 bp CAAAATGCCATGAATGGAATCGGAAGGCGCTCCACCACCTCCAACACCCTGGCACTGCGACGGAGACAGTaGTCACCTCGAGGCCGCCGC +
Preference number: 5 (lower is better)
Translates to: QNAMNGIGRRSTTSNTLALRRRQ*SPRGRR
Trigger: GCGGCGGCCTCGAGGTGACAACTGTCTCCGTCGCAG...TGCCAGGGTGTTGGAGGTGGTGGAGCGCCTTCCGATTCCATTCATGGCATTTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
CDS-3UTR CAA 90 bp TCTTTCACGGGAATCTTGTTGGGACAGCATTCCTTGGGGAGCGCCGGGTCGGCGTTCCAGCGGGGATTCTaGGCGCCATTGTGTGCCGTG +
Preference number: 5 (lower is better)
Translates to: SFTGILLGQHSLGSAGSAFQRGF*APLCAV
Trigger: CACGGCACACAATGGCGCCAAGAATCCCCGCTGGAA...CGCCGACCCGGCGCTCCCCAAGGAATGCTGTCCCAACAAGATTCCCGTGAAAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000527886.5
ENST00000530506.5
CDS-3UTR CAA 90 bp CTCTTTCACGGGAATCTTGTTGGGACAGCATTCCTTGGGGAGCGCCGGGTCGGCTTCCAGCGGGGATTCTaGGCGCCATTGTGTGCCGTG +
Preference number: 5 (lower is better)
Translates to: LFHGNLVGTAFLGERRVGFQRGF*APLCAV
Trigger: CACGGCACACAATGGCGCCAAGAATCCCCGCTGGAA...GCCGACCCGGCGCTCCCCAAGGAATGCTGTCCCAACAAGATTCCCGTGAAAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000527886.5
ENST00000530506.5
CDS-3UTR CAA 90 bp CCCCTTCCTCACTCCAGGTGTGGGTTCATTCTGCCTTCAGGCCGGAGTCTGTCACACTTGTCCTCCACCTaGCCCTGCCTCAGGGACTCC +
Preference number: 5 (lower is better)
Translates to: PLPHSRCGFILPSGRSLSHLSST*PCLRDS
Trigger: GGAGTCCCTGAGGCAGGGCAAGGTGGAGGACAAGTG...TGACAGACTCCGGCCTGAAGGCAGAATGAACCCACACCTGGAGTGAGGAAGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR CAA 90 bp GGGGGCGACACGGGTGCTCTTTCACGGGAATCTTGTTGGGACAGCATTCCTTGGCACTTGTCCTCCACCTaGCCCTGCCTCAGGGACTCC +
Preference number: 5 (lower is better)
Translates to: GGDTGALSRESCWDSIPWHLSST*PCLRDS
Trigger: GGAGTCCCTGAGGCAGGGCAAGGTGGAGGACAAGTG...CCAAGGAATGCTGTCCCAACAAGATTCCCGTGAAAGAGCACCCGTGTCGCCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
ENST00000530506.5
CDS-3UTR CAA 90 bp CTCAGACGGGCTCCAAGCAGGGTACAGCCCCAACGCGTCAGTGTCAGCTTCATCCTCAGGCTGTACCACTaGTCCTCCACCTTGCCCTGC +
Preference number: 5 (lower is better)
Translates to: LRRAPSRVQPQRVSVSFILRLYH*SSTLPC
Trigger: GCAGGGCAAGGTGGAGGACAAGTGGTACAGCCTGAG...GATGAAGCTGACACTGACGCGTTGGGGCTGTACCCTGCTTGGAGCCCGTCTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530506.5
CDS-3UTR CAA 90 bp CGGCATCCTTGTTCCCTCGCTGGGCTTCCAGCACGGAGCGGATCACCTCCTGGTATCTGCAGCAGGGAGTaGATGGCGGCATCCTTGTTC +
Preference number: 5 (lower is better)
Translates to: RHPCSLAGLPARSGSPPGICSRE*MAASLF
Trigger: GAACAAGGATGCCGCCATCAACTCCCTGCTGCAGAT...ACCAGGAGGTGATCCGCTCCGTGCTGGAAGCCCAGCGAGGGAACAAGGATGCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527938.5
ENST00000530506.5
CDS-3UTR CAA 90 bp GAACCGAAAACCCACATGCACCCAAGAACAGGTGTGGACGGGGCGGCACAGAAGTTGATGGCGGCATCCTaGTTCCCTCGCTGGGCTTCC +
Preference number: 5 (lower is better)
Translates to: EPKTHMHPRTGVDGAAQKLMAAS*FPRWAS
Trigger: GGAAGCCCAGCGAGGGAACAAGGATGCCGCCATCAA...CTTCTGTGCCGCCCCGTCCACACCTGTTCTTGGGTGCATGTGGGTTTTCGGTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
ENST00000530506.5
CDS-3UTR CAA 90 bp CCCATCTGCAGCAGGGAGTTGATGGCGGCATCCTTGTTCCCTCGCTGGGCTTCCATCTGCAGCAGGGAGTaGATGGCGGCATCCTTGTTC +
Preference number: 5 (lower is better)
Translates to: PICSRELMAASLFPRWASICSRE*MAASLF
Trigger: GAACAAGGATGCCGCCATCAACTCCCTGCTGCAGAT...GGAAGCCCAGCGAGGGAACAAGGATGCCGCCATCAACTCCCTGCTGCAGATGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527938.5
ENST00000530506.5
CDS-3UTR CAA 90 bp CGCACGTCCCAGGGACAGGAGAGCGCGCTGAGACCTCCCAGCACGAGATGGGAGTCTTTCACGGGAATCTaGTTGGGACAGCATTCCTTG +
Preference number: 5 (lower is better)
Translates to: RTSQGQESALRPPSTRWESFTGI*LGQHSL
Trigger: CAAGGAATGCTGTCCCAACAAGATTCCCGTGAAAGA...CTCCCATCTCGTGCTGGGAGGTCTCAGCGCGCTCTCCTGTCCCTGGGACGTGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR CAA 90 bp GCCTCGCAAGGCCTGTTGAGAAGAGAAGCTCCCTGGGAGGACACCCACGGAGCTCCGGCGGCAAGACACTaGAACCACAAACACCAGACA +
Preference number: 5 (lower is better)
Translates to: ASQGLLRREAPWEDTHGAPAARH*NHKHQT
Trigger: TGTCTGGTGTTTGTGGTTCAAGTGTCTTGCCGCCGG...AGCTCCGTGGGTGTCCTCCCAGGGAGCTTCTCTTCTCAACAGGCCTTGCGAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR CAA 90 bp TGTTGGGACAGCATTCCTTGGGGAGCGCCGGGTCGGCGTGTCCAAAGAGCGGGGCCACAGAAGACCCACTaGTGGGCATTCTCTTTCTGT +
Preference number: 5 (lower is better)
Translates to: CWDSIPWGAPGRRVQRAGPQKTH*WAFSFC
Trigger: ACAGAAAGAGAATGCCCACAAGTGGGTCTTCTGTGG...CCCCGCTCTTTGGACACGCCGACCCGGCGCTCCCCAAGGAATGCTGTCCCAACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR CAA 90 bp GAGGGGGCGACACGGGTGCTCTTTCACGGGAATCTTGTTGGGACAGCATTCCTTGTCATCGGCAAAGGGTaGCTCTCCCTCCAGCGAGGC +
Preference number: 5 (lower is better)
Translates to: EGATRVLFHGNLVGTAFLVIGKG*LSLQRG
Trigger: GCCTCGCTGGAGGGAGAGCAACCCTTTGCCGATGAC...AAGGAATGCTGTCCCAACAAGATTCCCGTGAAAGAGCACCCGTGTCGCCCCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR CAA 90 bp TTAGTGACCGCTGCCACGGAGCTGGCGATCGGCCTGCATCTTCAAACCCAGGAGTTCATGCAACTGCTCTaGGCAAGGCAGCTCCCACGC +
Preference number: 5 (lower is better)
Translates to: LVTAATELAIGLHLQTQEFMQLL*ARQLPR
Trigger: GCGTGGGAGCTGCCTTGCCAAGAGCAGTTGCATGAA...CTCCTGGGTTTGAAGATGCAGGCCGATCGCCAGCTCCGTGGCAGCGGTCACTAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527886.5
CDS TCA 90 bp TCTCGAGATAGAAAGAGTCCACGCCTGGGGGCACCGTGCAGTGGATaGCCTTATTCCAGCGGGGATTCTTGGCGCCATTGTGTGCCGTGG +
Preference number: 5 (lower is better)
Translates to: SRDRKSPRLGAPCSG*PYSSGDSWRHCVPW
Trigger: CCACGGCACACAATGGCGCCAAGAATCCCCGCTGGAATAAGGTCATCCACTGCACGGTGCCCCCAGGCGTGGACTCTTTCTATCTCGAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000527746.5
ENST00000527886.5
ENST00000528719.1
ENST00000530506.5
ENST00000530541.1
CDS-3UTR CAA 90 bp GCGACACGGGTGCTCTTTCACGGGAATCTTGTTGGGACAGCATTCCTTGGGGAGTTCCAGCGGGGATTCTaGGCGCCATTGTGTGCCGTG +
Preference number: 5 (lower is better)
Translates to: ATRVLFHGNLVGTAFLGEFQRGF*APLCAV
Trigger: CACGGCACACAATGGCGCCAAGAATCCCCGCTGGAA...CTCCCCAAGGAATGCTGTCCCAACAAGATTCCCGTGAAAGAGCACCCGTGTCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000527886.5
ENST00000530506.5
CDS-3UTR CAA 90 bp ACCCCAGCCTCGCAAGGCCTGTTGAGAAGAGAAGCTCCCTGGGAGGACACCCACTTCACGGGAATCTTGTaGGGACAGCATTCCTTGGGG +
Preference number: 5 (lower is better)
Translates to: TPASQGLLRREAPWEDTHFTGIL*GQHSLG
Trigger: CCCCAAGGAATGCTGTCCCAACAAGATTCCCGTGAA...GTGGGTGTCCTCCCAGGGAGCTTCTCTTCTCAACAGGCCTTGCGAGGCTGGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR CAA 90 bp CCTCTCACCCCAGCCTCGCAAGGCCTGTTGAGAAGAGAAGCTCCCTGGGAGGACTTCACGGGAATCTTGTaGGGACAGCATTCCTTGGGG +
Preference number: 5 (lower is better)
Translates to: PLTPASQGLLRREAPWEDFTGIL*GQHSLG
Trigger: CCCCAAGGAATGCTGTCCCAACAAGATTCCCGTGAA...GTCCTCCCAGGGAGCTTCTCTTCTCAACAGGCCTTGCGAGGCTGGGGTGAGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR CAA 90 bp TGTTGGGACAGCATTCCTTGGGGAGCGCCGGGTCGGCGTGTCCAAAGAGCGGGGTCTTTCACGGGAATCTaGTTGGGACAGCATTCCTTG +
Preference number: 5 (lower is better)
Translates to: CWDSIPWGAPGRRVQRAGSFTGI*LGQHSL
Trigger: CAAGGAATGCTGTCCCAACAAGATTCCCGTGAAAGA...CCCCGCTCTTTGGACACGCCGACCCGGCGCTCCCCAAGGAATGCTGTCCCAACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
ENST00000530506.5
CDS-3UTR CAA 90 bp TCTTTCACGGGAATCTTGTTGGGACAGCATTCCTTGGGGAGCGCCGGGTCGGCGCCGGCGGCAAGACACTaGAACCACAAACACCAGACA +
Preference number: 5 (lower is better)
Translates to: SFTGILLGQHSLGSAGSAPAARH*NHKHQT
Trigger: TGTCTGGTGTTTGTGGTTCAAGTGTCTTGCCGCCGG...CGCCGACCCGGCGCTCCCCAAGGAATGCTGTCCCAACAAGATTCCCGTGAAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS TCA 90 bp CACTGTGGGTCCCTCGCTGCTCTGGATCCTGGTTGTCCCGGTATTTaGAGGCGTCCAGCGCTCCATCTCCTTGCTCTGCACTCTTTAGGT +
Preference number: 5 (lower is better)
Translates to: HCGSLAALDPGCPGI*RRPALHLLALHSLG
Trigger: ACCTAAAGAGTGCAGAGCAAGGAGATGGAGCGCTGGACGCCTTCAAATACCGGGACAACCAGGATCCAGAGCAGCGAGGGACCCACAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527085.1
CDS-3UTR CAA 90 bp CAAGAGCATTTTCCAGAACGGCATGAGAAGGAGAGACGCACGTCCCAGGGACAGCTCAGGCTGTACCACTaGTCCTCCACCTTGCCCTGC +
Preference number: 5 (lower is better)
Translates to: QEHFPERHEKERRTSQGQLRLYH*SSTLPC
Trigger: GCAGGGCAAGGTGGAGGACAAGTGGTACAGCCTGAG...CTGTCCCTGGGACGTGCGTCTCTCCTTCTCATGCCGTTCTGGAAAATGCTCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR CAA 90 bp CAAAATGCCATGAATGGAATCGGAAGGCGCTCCACCACCTCCAACACCCTGGCATTGATGGCGGCATCCTaGTTCCCTCGCTGGGCTTCC +
Preference number: 5 (lower is better)
Translates to: QNAMNGIGRRSTTSNTLALMAAS*FPRWAS
Trigger: GGAAGCCCAGCGAGGGAACAAGGATGCCGCCATCAA...TGCCAGGGTGTTGGAGGTGGTGGAGCGCCTTCCGATTCCATTCATGGCATTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR CAA 90 bp TGGTCCATGTTGGGGAACATGTCCTGGATGGCTTTCAGGTCCTCCTCGCTACAGTTGATGGCGGCATCCTaGTTCCCTCGCTGGGCTTCC +
Preference number: 5 (lower is better)
Translates to: WSMLGNMSWMAFRSSSLQLMAAS*FPRWAS
Trigger: GGAAGCCCAGCGAGGGAACAAGGATGCCGCCATCAA...CTGTAGCGAGGAGGACCTGAAAGCCATCCAGGACATGTTCCCCAACATGGACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527938.5
ENST00000530506.5
CDS-3UTR CAA 90 bp GAACCGAAAACCCACATGCACCCAAGAACAGGTGTGGACGGGGCGGCACAGAAGATCTGCAGCAGGGAGTaGATGGCGGCATCCTTGTTC +
Preference number: 5 (lower is better)
Translates to: EPKTHMHPRTGVDGAAQKICSRE*MAASLF
Trigger: GAACAAGGATGCCGCCATCAACTCCCTGCTGCAGAT...CTTCTGTGCCGCCCCGTCCACACCTGTTCTTGGGTGCATGTGGGTTTTCGGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
ENST00000530506.5
CDS-3UTR CAA 90 bp CCCCTTCCTCACTCCAGGTGTGGGTTCATTCTGCCTTCAGGCCGGAGTCTGTCAATCTGCAGCAGGGAGTaGATGGCGGCATCCTTGTTC +
Preference number: 5 (lower is better)
Translates to: PLPHSRCGFILPSGRSLSICSRE*MAASLF
Trigger: GAACAAGGATGCCGCCATCAACTCCCTGCTGCAGAT...TGACAGACTCCGGCCTGAAGGCAGAATGAACCCACACCTGGAGTGAGGAAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR CAA 90 bp ACCCACATGCACCCAAGAACAGGTGTGGACGGGGCGGCACAGAAGTCCACGGGACCACAGAAGACCCACTaGTGGGCATTCTCTTTCTGT +
Preference number: 5 (lower is better)
Translates to: THMHPRTGVDGAAQKSTGPQKTH*WAFSFC
Trigger: ACAGAAAGAGAATGCCCACAAGTGGGTCTTCTGTGG...TCCCGTGGACTTCTGTGCCGCCCCGTCCACACCTGTTCTTGGGTGCATGTGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR CAA 90 bp GAAAACCCACATGCACCCAAGAACAGGTGTGGACGGGGCGGCACAGAAGTCCACTTCACGGGAATCTTGTaGGGACAGCATTCCTTGGGG +
Preference number: 5 (lower is better)
Translates to: ENPHAPKNRCGRGGTEVHFTGIL*GQHSLG
Trigger: CCCCAAGGAATGCTGTCCCAACAAGATTCCCGTGAA...GTGGACTTCTGTGCCGCCCCGTCCACACCTGTTCTTGGGTGCATGTGGGTTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
ENST00000530506.5
CDS-3UTR CAA 90 bp GGAGCGCCGGGTCGGCGTGTCCAAAGAGCGGGGGCAAAACGGCATCGAGGCAGATGTCCTGGGTTAGAGTaGTTAATATCACGGAACATA +
Preference number: 5 (lower is better)
Translates to: GAPGRRVQRAGAKRHRGRCPGLE*LISRNI
Trigger: TATGTTCCGTGATATTAACAACTCTAACCCAGGACA...TCTGCCTCGATGCCGTTTTGCCCCCGCTCTTTGGACACGCCGACCCGGCGCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS CCA 90 bp CCCTCTCACCTCATCGAAGATCTCGAGATAGAAAGAGTCCACGCCTaGGGGCACCGTGCAGTGGATGACCTTATTCCAGCGGGGATTCTT +
Preference number: 5 (lower is better)
Translates to: PSHLIEDLEIERVHA*GHRAVDDLIPAGIL
Trigger: AAGAATCCCCGCTGGAATAAGGTCATCCACTGCACGGTGCCCCCAGGCGTGGACTCTTTCTATCTCGAGATCTTCGATGAGGTGAGAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527746.5
CDS-3UTR CAA 90 bp CAAGAGCATTTTCCAGAACGGCATGAGAAGGAGAGACGCACGTCCCAGGGACAGCCGGCGGCAAGACACTaGAACCACAAACACCAGACA +
Preference number: 5 (lower is better)
Translates to: QEHFPERHEKERRTSQGQPAARH*NHKHQT
Trigger: TGTCTGGTGTTTGTGGTTCAAGTGTCTTGCCGCCGG...CTGTCCCTGGGACGTGCGTCTCTCCTTCTCATGCCGTTCTGGAAAATGCTCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS TCA 90 bp ATGAGATTCGACTTCAGGCCAGGTGCTCAGCTGGGCAGGGACATTTaGGGTCCTCGGGGTGGGAGTGAACGTGTGTTCAGAATAAGACAG +
Preference number: 5 (lower is better)
Translates to: MRFDFRPGAQLGRDI*GPRGGSERVFRIRQ
Trigger: CTGTCTTATTCTGAACACACGTTCACTCCCACCCCGAGGACCTCAAATGTCCCTGCCCAGCTGAGCACCTGGCCTGAAGTCGAATCTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527638.1
CDS GCA 90 bp CGCCGCACAGCTGAACTCTCCCCTCCTGTGCCCACATCTCTGGACTaGCAGGTCCTCTGTTTTCTATTCTTGTCCACATACAAGTTCCCT +
Preference number: 5 (lower is better)
Translates to: RRTAELSPPVPTSLD*QVLCFLFLSTYKFP
Trigger: AGGGAACTTGTATGTGGACAAGAATAGAAAACAGAGGACCTGGCAGTCCAGAGATGTGGGCACAGGAGGGGAGAGTTCAGCTGTGCGGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528719.1
CDS GCA 90 bp TCCTGGTTGTCCCGGTATTTGAAGGCGTCCAGCGCTCCATCTCCTTaGTCTGCACTCTTTAGGTGTCCGTTAAAGACAGTGGGACTGCTC +
Preference number: 5 (lower is better)
Translates to: SWLSRYLKASSAPSP*SALFRCPLKTVGLL
Trigger: GAGCAGTCCCACTGTCTTTAACGGACACCTAAAGAGTGCAGAGCAAGGAGATGGAGCGCTGGACGCCTTCAAATACCGGGACAACCAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527085.1
CDS CCA 90 bp GAAGGCTCTCTCATCGAAGATCTCGAGATAGAAAGAGTCCACGCCTaGGGGCACCGTGCAGTGGATGACCTTATTCCAGCGGGGATTCTT +
Preference number: 5 (lower is better)
Translates to: EGSLIEDLEIERVHA*GHRAVDDLIPAGIL
Trigger: AAGAATCCCCGCTGGAATAAGGTCATCCACTGCACGGTGCCCCCAGGCGTGGACTCTTTCTATCTCGAGATCTTCGATGAGAGAGCCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000527886.5
ENST00000528719.1
ENST00000530506.5
ENST00000530541.1
CDS CCA 90 bp ACCCTCGCCGCACAGCTGAACTCTCCCCTCCTGTGCCCACATCTCTaGACTGCCAGGTCCTCTGTTTTCTATTCTTGTCCACATACAAGT +
Preference number: 5 (lower is better)
Translates to: TLAAQLNSPLLCPHL*TARSSVFYSCPHTS
Trigger: ACTTGTATGTGGACAAGAATAGAAAACAGAGGACCTGGCAGTCCAGAGATGTGGGCACAGGAGGGGAGAGTTCAGCTGTGCGGCGAGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528719.1
CDS-3UTR CAA 90 bp AAAACCCACATGCACCCAAGAACAGGTGTGGACGGGGCGGCACAGAAGTCCACGTCTTTCACGGGAATCTaGTTGGGACAGCATTCCTTG +
Preference number: 5 (lower is better)
Translates to: KTHMHPRTGVDGAAQKSTSFTGI*LGQHSL
Trigger: CAAGGAATGCTGTCCCAACAAGATTCCCGTGAAAGA...CGTGGACTTCTGTGCCGCCCCGTCCACACCTGTTCTTGGGTGCATGTGGGTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
ENST00000530506.5
CDS-3UTR CAA 90 bp GCGACACGGGTGCTCTTTCACGGGAATCTTGTTGGGACAGCATTCCTTGGGGAGCCACAGAAGACCCACTaGTGGGCATTCTCTTTCTGT +
Preference number: 5 (lower is better)
Translates to: ATRVLFHGNLVGTAFLGEPQKTH*WAFSFC
Trigger: ACAGAAAGAGAATGCCCACAAGTGGGTCTTCTGTGG...CTCCCCAAGGAATGCTGTCCCAACAAGATTCCCGTGAAAGAGCACCCGTGTCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR CAA 90 bp CTATTCCAATTACATCACATCACAAAATGCCATGAATGGAATCGGAAGGCGCTCCTGCGACGGAGACAGTaGTCACCTCGAGGCCGCCGC +
Preference number: 5 (lower is better)
Translates to: LFQLHHITKCHEWNRKALLRRRQ*SPRGRR
Trigger: GCGGCGGCCTCGAGGTGACAACTGTCTCCGTCGCAG...GAGCGCCTTCCGATTCCATTCATGGCATTTTGTGATGTGATGTAATTGGAATAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
CDS-3UTR CAA 90 bp GAGGGGGCGACACGGGTGCTCTTTCACGGGAATCTTGTTGGGACAGCATTCCTTTCTTTCACGGGAATCTaGTTGGGACAGCATTCCTTG +
Preference number: 5 (lower is better)
Translates to: EGATRVLFHGNLVGTAFLSFTGI*LGQHSL
Trigger: CAAGGAATGCTGTCCCAACAAGATTCCCGTGAAAGA...AAGGAATGCTGTCCCAACAAGATTCCCGTGAAAGAGCACCCGTGTCGCCCCCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
ENST00000530506.5
CDS GCA 90 bp TCAGGAAAAGCGGGAATCAGAAGTTCTGTTTGCCCGCTTAGGAAATaGAGTATAAACGCCGAAATCCGAAATCCCACCCCCACCGAGCGC +
Preference number: 5 (lower is better)
Translates to: SGKAGIRSSVCPLRK*SINAEIRNPTPTER
Trigger: GCGCTCGGTGGGGGTGGGATTTCGGATTTCGGCGTTTATACTGCATTTCCTAAGCGGGCAAACAGAACTTCTGATTCCCGCTTTTCCTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532551.1
CDS TCA 90 bp TGTTTATTTGTGACAACTGCTTCCTGTGTGCCACATGCACAGCTCTaGGGACATGGCAGGAAAAGCACCGTATCTCCTGGGCACACATGG +
Preference number: 5 (lower is better)
Translates to: CLFVTTASCVPHAQL*GHGRKSTVSPGHTW
Trigger: CCATGTGTGCCCAGGAGATACGGTGCTTTTCCTGCCATGTCCTCAGAGCTGTGCATGTGGCACACAGGAAGCAGTTGTCACAAATAAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527085.1
CDS-3UTR CAA 90 bp GCTCTCTACAGCAAGAGCATTTTCCAGAACGGCATGAGAAGGAGAGACGCACGTCCACAGAAGACCCACTaGTGGGCATTCTCTTTCTGT +
Preference number: 5 (lower is better)
Translates to: ALYSKSIFQNGMRRRDARPQKTH*WAFSFC
Trigger: ACAGAAAGAGAATGCCCACAAGTGGGTCTTCTGTGG...ACGTGCGTCTCTCCTTCTCATGCCGTTCTGGAAAATGCTCTTGCTGTAGAGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR CAA 90 bp ACGGGAGGGGGCGACACGGGTGCTCTTTCACGGGAATCTTGTTGGGACAGCATTTGTCCTGGGTTAGAGTaGTTAATATCACGGAACATA +
Preference number: 5 (lower is better)
Translates to: TGGGDTGALSRESCWDSICPGLE*LISRNI
Trigger: TATGTTCCGTGATATTAACAACTCTAACCCAGGACA...AATGCTGTCCCAACAAGATTCCCGTGAAAGAGCACCCGTGTCGCCCCCTCCCGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR CAA 90 bp ACCCACAGTGTGAGGGATTGTGTGTGCCTTAAATCAACAGCTCTATTCCAATTAGTCATCGGCAAAGGGTaGCTCTCCCTCCAGCGAGGC +
Preference number: 5 (lower is better)
Translates to: THSVRDCVCLKSTALFQLVIGKG*LSLQRG
Trigger: GCCTCGCTGGAGGGAGAGCAACCCTTTGCCGATGAC...TAATTGGAATAGAGCTGTTGATTTAAGGCACACACAATCCCTCACACTGTGGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS TCA 90 bp CTCCACGCCAGTCTCCTGGCACTGGCATGTTCAATAAACAACCCTTaGGCAAATAAGTGGCATTTCATGCAACTGCTCTTGGCAAGGCAG +
Preference number: 5 (lower is better)
Translates to: LHASLLALACSINNP*ANKWHFMQLLLARQ
Trigger: CTGCCTTGCCAAGAGCAGTTGCATGAAATGCCACTTATTTGCTCAAGGGTTGTTTATTGAACATGCCAGTGCCAGGAGACTGGCGTGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527886.5
CDS GCA 90 bp GCCAAATTCCTGTTTATTTGTGACAACTGCTTCCTGTGTGCCACATaGACAGCTCTGAGGACATGGCAGGAAAAGCACCGTATCTCCTGG +
Preference number: 5 (lower is better)
Translates to: AKFLFICDNCFLCAT*TALRTWQEKHRISW
Trigger: CCAGGAGATACGGTGCTTTTCCTGCCATGTCCTCAGAGCTGTGCATGTGGCACACAGGAAGCAGTTGTCACAAATAAACAGGAATTTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527085.1
CDS-3UTR CAA 90 bp CTATTCCAATTACATCACATCACAAAATGCCATGAATGGAATCGGAAGGCGCTCCCTGCTGGTACACTGTaGGCATCAGGACCACGGGCT +
Preference number: 5 (lower is better)
Translates to: LFQLHHITKCHEWNRKALPAGTL*ASGPRA
Trigger: AGCCCGTGGTCCTGATGCCAACAGTGTACCAGCAGG...GAGCGCCTTCCGATTCCATTCATGGCATTTTGTGATGTGATGTAATTGGAATAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR CAA 90 bp GTCCGTTATCAGTGGGTTTACATCCGAAGGCCGGCGGCAAGACACTTGAACCACTGTCCTGGGTTAGAGTaGTTAATATCACGGAACATA +
Preference number: 5 (lower is better)
Translates to: VRYQWVYIRRPAARHLNHCPGLE*LISRNI
Trigger: TATGTTCCGTGATATTAACAACTCTAACCCAGGACA...GTGGTTCAAGTGTCTTGCCGCCGGCCTTCGGATGTAAACCCACTGATAACGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS-3UTR CAA 90 bp ACCCACAGTGTGAGGGATTGTGTGTGCCTTAAATCAACAGCTCTATTCCAATTAATCTGCAGCAGGGAGTaGATGGCGGCATCCTTGTTC +
Preference number: 5 (lower is better)
Translates to: THSVRDCVCLKSTALFQLICSRE*MAASLF
Trigger: GAACAAGGATGCCGCCATCAACTCCCTGCTGCAGAT...TAATTGGAATAGAGCTGTTGATTTAAGGCACACACAATCCCTCACACTGTGGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
CDS GCA 90 bp AACATCACACAGGTTTCAGGAAAAGCGGGAATCAGAAGTTCTGTTTaGCCGCTTAGGAAATGCAGTATAAACGCCGAAATCCGAAATCCC +
Preference number: 5 (lower is better)
Translates to: NITQVSGKAGIRSSV*PLRKCSINAEIRNP
Trigger: GGGATTTCGGATTTCGGCGTTTATACTGCATTTCCTAAGCGGGCAAACAGAACTTCTGATTCCCGCTTTTCCTGAAACCTGTGTGATGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532551.1
CDS GCA 72 bp CCGCCTGGGCGTCCAGCTGGACGGTGGTCGCCATGGTaGTGCGGCGGCCCCCGTGGCTCGCCGACCCGACAG +
Preference number: 6 (lower is better)
Translates to: PPGRPAGRWSPW*CGGPRGSPTRQ
Trigger: CTGTCGGGTCGGCGAGCCACGGGGGCCGCCGCAGCACCATGGCGACCACCGTCCAGCTGGACGCCCAGGCGG
78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263646.11
CDS GCA 72 bp CTCGCCGACCCGACAGTGACGCGCCGGGCGACCTCCTaGGCCCCCGCCGGAGCCTGCGACGGAGACAGTTGT +
Preference number: 6 (lower is better)
Translates to: LADPTVTRRATS*APAGACDGDSC
Trigger: ACAACTGTCTCCGTCGCAGGCTCCGGCGGGGGCGCAGGAGGTCGCCCGGCGCGTCACTGTCGGGTCGGCGAG
75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527085.1
ENST00000527638.1
ENST00000527938.5
ENST00000530541.1
ENST00000532551.1
CDS CCA 72 bp CCCACTGCGCCTCCGTACTGCAGCTGCTGGGCCGCCTaGGCGTCCAGCTGGACGGTGGTCGCCATGGTGCTG +
Preference number: 6 (lower is better)
Translates to: PTAPPYCSCWAA*ASSWTVVAMVL
Trigger: CAGCACCATGGCGACCACCGTCCAGCTGGACGCCCAGGCGGCCCAGCAGCTGCAGTACGGAGGCGCAGTGGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263646.11
CDS CAA 90 bp CAGGTGGGGAGCCACGCCTCGAAGCCAGCCAGGAACGTGGCTGTGTaGGCAGGTGTGTCCCCACGGCAGCCACGCTCAGCCACGTGCAGC +
Preference number: 6 (lower is better)
Translates to: QVGSHASKPARNVAV*AGVSPRQPRSATCS
Trigger: GCTGCACGTGGCTGAGCGTGGCTGCCGTGGGGACACACCTGCCAACACAGCCACGTTCCTGGCTGGCTTCGAGGCGTGGCTCCCCACCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527746.5
CDS TCA 72 bp GGCAGGAGGGTGCCCCAAGGCCCACCTGTACCACCGTaGTGTTCAGTCGGCCCACGGTGCCCACTGCGCCTC +
Preference number: 6 (lower is better)
Translates to: GRRVPQGPPVPP*CSVGPRCPLRL
Trigger: GAGGCGCAGTGGGCACCGTGGGCCGACTGAACATCACGGTGGTACAGGTGGGCCTTGGGGCACCCTCCTGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532551.1
CDS CCA 72 bp AGGTGGGGAGCCACGCCTCGAAGCCAGCCAGGAACGTaGCTGTGTTGGCAGGTGTGTCCCCACGGCAGCCAC +
Preference number: 6 (lower is better)
Translates to: RWGATPRSQPGT*LCWQVCPHGSH
Trigger: GTGGCTGCCGTGGGGACACACCTGCCAACACAGCCACGTTCCTGGCTGGCTTCGAGGCGTGGCTCCCCACCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527746.5
CDS TCA 72 bp CGTCCAGCTGGACCTGCCGCTGCTGCTGTGTGGGCGTaGTGCGGAGGAAGTCCTGCGGGAGCTCACCGATGT +
Preference number: 6 (lower is better)
Translates to: RPAGPAAAAVWA*CGGSPAGAHRC
Trigger: ACATCGGTGAGCTCCCGCAGGACTTCCTCCGCATCACGCCCACACAGCAGCAGCGGCAGGTCCAGCTGGACG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000317204.11
ENST00000525159.5
ENST00000527638.1
ENST00000527746.5
ENST00000527886.5
ENST00000527938.5
ENST00000532551.1
CDS GCA 72 bp GCAGGTGTGTCCCCACGGCAGCCACGCTCAGCCACGTaGAGCCTCCATAATAGCTGGCACGTCCCTCTCACC +
Preference number: 6 (lower is better)
Translates to: AGVSPRQPRSAT*SLHNSWHVPLT
Trigger: GGTGAGAGGGACGTGCCAGCTATTATGGAGGCTGCACGTGGCTGAGCGTGGCTGCCGTGGGGACACACCTGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527746.5
CDS GCA 72 bp CCAGGCGCAGTCGGCAGTAGGGGTCCATGCGGGTCATaGCGTAATTCTTGGCCAACTTTGCCGGCCCGCGCT +
Preference number: 6 (lower is better)
Translates to: PGAVGSRGPCGS*RNSWPTLPARA
Trigger: AGCGCGGGCCGGCAAAGTTGGCCAAGAATTACGGCATGACCCGCATGGACCCCTACTGCCGACTGCGCCTGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000530506.5
ENST00000530541.1
CDS CCA 72 bp ACCTCTACCAAGGAGGCCTCTCTGACGGCACCGCGGTaGCTGCAGCGGAGTCTCCCGCAAACGTCCCGAGAT +
Preference number: 6 (lower is better)
Translates to: TSTKEASLTAPR*LQRSLPQTSRD
Trigger: ATCTCGGGACGTTTGCGGGAGACTCCGCTGCAGCCACCGCGGTGCCGTCAGAGAGGCCTCCTTGGTAGAGGT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530821.1
CDS GCA 72 bp GACCTTATTCCAGCGGGGATTCTTGGCGCCATTGTGTaGCGTGGGCGTCTCGTACACCGCGTAGCCCAGGCG +
Preference number: 6 (lower is better)
Translates to: DLIPAGILGAIV*RGRLVHRVAQA
Trigger: CGCCTGGGCTACGCGGTGTACGAGACGCCCACGGCACACAATGGCGCCAAGAATCCCCGCTGGAATAAGGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000527746.5
ENST00000527886.5
ENST00000528719.1
ENST00000530506.5
ENST00000530541.1
CDS GCA 72 bp CCGCTCAGGCTGTACCACTTGTCCTCCACCTTGCCCTaGCTCAGGGACTCCGGGATGGTGATGTGGGTCCAG +
Preference number: 6 (lower is better)
Translates to: PLRLYHLSSTLP*LRDSGMVMWVQ
Trigger: CTGGACCCACATCACCATCCCGGAGTCCCTGAGGCAGGGCAAGGTGGAGGACAAGTGGTACAGCCTGAGCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
ENST00000528719.1
ENST00000530506.5
ENST00000530541.1
CDS GCA 72 bp CCGCGTAGCCCAGGCGCAGTCGGCAGTAGGGGTCCATaGGGGTCATGCCGTAATTCTTGGCCAACTTTGCCG +
Preference number: 6 (lower is better)
Translates to: PRSPGAVGSRGP*GSCRNSWPTLP
Trigger: CGGCAAAGTTGGCCAAGAATTACGGCATGACCCGCATGGACCCCTACTGCCGACTGCGCCTGGGCTACGCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000530506.5
ENST00000530541.1
CDS CCA 72 bp TATTCCAGCGGGGATTCTTGGCGCCATTGTGTGCCGTaGGCGTCTCGTACACCGCGTAGCCCAGGCGCAGTC +
Preference number: 6 (lower is better)
Translates to: YSSGDSWRHCVP*ASRTPRSPGAV
Trigger: GACTGCGCCTGGGCTACGCGGTGTACGAGACGCCCACGGCACACAATGGCGCCAAGAATCCCCGCTGGAATA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000527746.5
ENST00000527886.5
ENST00000528719.1
ENST00000530506.5
ENST00000530541.1
CDS CCA 72 bp GGCAGTAGGGGTCCATGCGGGTCATGCCGTAATTCTTaGCCAACTTTGCCTCTGAGGGCACGGCCGCCCCGT +
Preference number: 6 (lower is better)
Translates to: GSRGPCGSCRNS*PTLPLRARPPR
Trigger: ACGGGGCGGCCGTGCCCTCAGAGGCAAAGTTGGCCAAGAATTACGGCATGACCCGCATGGACCCCTACTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528719.1
CDS GCA 72 bp CCGCGTAGCCCAGGCGCAGTCGGCAGTAGGGGTCCATaGGGGTCATGCCGTAATTCTTGGCCAACTTTGCCT +
Preference number: 6 (lower is better)
Translates to: PRSPGAVGSRGP*GSCRNSWPTLP
Trigger: AGGCAAAGTTGGCCAAGAATTACGGCATGACCCGCATGGACCCCTACTGCCGACTGCGCCTGGGCTACGCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000527746.5
ENST00000527886.5
ENST00000528719.1
CDS GCA 72 bp CCAGAGGCCTCTGAGGGAGCACTGTGGGTCCCTCGCTaGTCTGGATCCTGGTTGTCCCGGTATTTGAAGGCG +
Preference number: 6 (lower is better)
Translates to: PEASEGALWVPR*SGSWLSRYLKA
Trigger: CGCCTTCAAATACCGGGACAACCAGGATCCAGAGCAGCGAGGGACCCACAGTGCTCCCTCAGAGGCCTCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527085.1
CDS CCA 72 bp ACCTTGCCCTGCCTCAGGGACTCCGGGATGGTGATGTaGGTCCAGGCAATGCGGTCGTCCATGGAGAAGGCT +
Preference number: 6 (lower is better)
Translates to: TLPCLRDSGMVM*VQAMRSSMEKA
Trigger: AGCCTTCTCCATGGACGACCGCATTGCCTGGACCCACATCACCATCCCGGAGTCCCTGAGGCAGGGCAAGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000525159.5
ENST00000527886.5
ENST00000528719.1
ENST00000530506.5
ENST00000530541.1
CDS CCA 72 bp GAGGGAGCACTGTGGGTCCCTCGCTGCTCTGGATCCTaGTTGTCCCGGTATTTGAAGGCGTCCAGCGCTCCA +
Preference number: 6 (lower is better)
Translates to: EGALWVPRCSGS*LSRYLKASSAP
Trigger: TGGAGCGCTGGACGCCTTCAAATACCGGGACAACCAGGATCCAGAGCAGCGAGGGACCCACAGTGCTCCCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527085.1
CDS CAA 90 bp GCCTCTGAGGGAGCACTGTGGGTCCCTCGCTGCTCTGGATCCTGGTaGTCCCGGTATTTGAAGGCGTCCAGCGCTCCATCTCCTTGCTCT +
Preference number: 6 (lower is better)
Translates to: ASEGALWVPRCSGSW*SRYLKASSAPSPCS
Trigger: AGAGCAAGGAGATGGAGCGCTGGACGCCTTCAAATACCGGGACAACCAGGATCCAGAGCAGCGAGGGACCCACAGTGCTCCCTCAGAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527085.1
CDS GCA 72 bp CCAGGCGCAGTCGGCAGTAGGGGTCCATGCGGGTCATaGCGTAATTCTTGGCCAACTTTGCCTGTACCACCG +
Preference number: 6 (lower is better)
Translates to: PGAVGSRGPCGS*RNSWPTLPVPP
Trigger: CGGTGGTACAGGCAAAGTTGGCCAAGAATTACGGCATGACCCGCATGGACCCCTACTGCCGACTGCGCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000527746.5
ENST00000527886.5
CDS GCA 72 bp CCAGGCGCAGTCGGCAGTAGGGGTCCATGCGGGTCATaGCGTAATTCTTGGCCAACTTTGCCTCTGAGGGCA +
Preference number: 6 (lower is better)
Translates to: PGAVGSRGPCGS*RNSWPTLPLRA
Trigger: TGCCCTCAGAGGCAAAGTTGGCCAAGAATTACGGCATGACCCGCATGGACCCCTACTGCCGACTGCGCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528719.1
CDS GCA 72 bp GCAGCGGAGTCTCCCGCAAACGTCCCGAGATCTCACTaGAGAAGGCAGGGGTCCACACGGTACTCCTCGATA +
Preference number: 6 (lower is better)
Translates to: AAESPANVPRSH*RRQGSTRYSSI
Trigger: TATCGAGGAGTACCGTGTGGACCCCTGCCTTCTGCAGTGAGATCTCGGGACGTTTGCGGGAGACTCCGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530821.1
CDS TCA 72 bp GACTTCAGGCCAGGTGCTCAGCTGGGCAGGGACATTTaGGGTCCTCGGGGTGGGAGTGAACGTGTGTTCAGA +
Preference number: 6 (lower is better)
Translates to: DFRPGAQLGRDI*GPRGGSERVFR
Trigger: TCTGAACACACGTTCACTCCCACCCCGAGGACCTCAAATGTCCCTGCCCAGCTGAGCACCTGGCCTGAAGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527638.1
CDS TCA 72 bp TCCCTCGCTGCTCTGGATCCTGGTTGTCCCGGTATTTaGAGGCGTCCAGCGCTCCATCTCCTTGCTCTGCAC +
Preference number: 6 (lower is better)
Translates to: SLAALDPGCPGI*RRPALHLLALH
Trigger: GTGCAGAGCAAGGAGATGGAGCGCTGGACGCCTTCAAATACCGGGACAACCAGGATCCAGAGCAGCGAGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527085.1
CDS CAA 72 bp ACCGTGCAGTGGATGACCTTATTCCAGCGGGGATTCTaGGCGCCATTGTGTGCCGTGGGCGTCTCGTACACC +
Preference number: 6 (lower is better)
Translates to: TVQWMTLFQRGF*APLCAVGVSYT
Trigger: GGTGTACGAGACGCCCACGGCACACAATGGCGCCAAGAATCCCCGCTGGAATAAGGTCATCCACTGCACGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000527746.5
ENST00000527886.5
ENST00000528719.1
ENST00000530506.5
ENST00000530541.1
CDS CAA 72 bp GTCCCTCGCTGCTCTGGATCCTGGTTGTCCCGGTATTaGAAGGCGTCCAGCGCTCCATCTCCTTGCTCTGCA +
Preference number: 6 (lower is better)
Translates to: VPRCSGSWLSRY*KASSAPSPCSA
Trigger: TGCAGAGCAAGGAGATGGAGCGCTGGACGCCTTCAAATACCGGGACAACCAGGATCCAGAGCAGCGAGGGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527085.1
CDS CAA 90 bp GCACTGTGGGTCCCTCGCTGCTCTGGATCCTGGTTGTCCCGGTATTaGAAGGCGTCCAGCGCTCCATCTCCTTGCTCTGCACTCTTTAGG +
Preference number: 6 (lower is better)
Translates to: ALWVPRCSGSWLSRY*KASSAPSPCSALFR
Trigger: CCTAAAGAGTGCAGAGCAAGGAGATGGAGCGCTGGACGCCTTCAAATACCGGGACAACCAGGATCCAGAGCAGCGAGGGACCCACAGTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527085.1
CDS TCA 72 bp AGAAAGAGTCCACGCCTGGGGGCACCGTGCAGTGGATaGCCTTATTCCAGCGGGGATTCTTGGCGCCATTGT +
Preference number: 6 (lower is better)
Translates to: RKSPRLGAPCSG*PYSSGDSWRHC
Trigger: ACAATGGCGCCAAGAATCCCCGCTGGAATAAGGTCATCCACTGCACGGTGCCCCCAGGCGTGGACTCTTTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000527746.5
ENST00000527886.5
ENST00000528719.1
ENST00000530506.5
ENST00000530541.1
CDS CCA 72 bp CAGCCACGCTCAGCCACGTGCAGCCTCCATAATAGCTaGCACGTCCCTCTCACCTCATCGAAGATCTCGAGA +
Preference number: 6 (lower is better)
Translates to: QPRSATCSLHNS*HVPLTSSKISR
Trigger: TCTCGAGATCTTCGATGAGGTGAGAGGGACGTGCCAGCTATTATGGAGGCTGCACGTGGCTGAGCGTGGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527746.5
CDS TCA 72 bp GCTGGGCAGGGACATTTGAGGTCCTCGGGGTGGGAGTaGACGTGTGTTCAGAATAAGACAGAAGACCGTGGC +
Preference number: 6 (lower is better)
Translates to: AGQGHLRSSGWE*TCVQNKTEDRG
Trigger: GCCACGGTCTTCTGTCTTATTCTGAACACACGTTCACTCCCACCCCGAGGACCTCAAATGTCCCTGCCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527638.1
CDS TCA 72 bp GTGACAACTGCTTCCTGTGTGCCACATGCACAGCTCTaGGGACATGGCAGGAAAAGCACCGTATCTCCTGGG +
Preference number: 6 (lower is better)
Translates to: VTTASCVPHAQL*GHGRKSTVSPG
Trigger: CCCAGGAGATACGGTGCTTTTCCTGCCATGTCCTCAGAGCTGTGCATGTGGCACACAGGAAGCAGTTGTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527085.1
CDS CCA 72 bp CTCATCGAAGATCTCGAGATAGAAAGAGTCCACGCCTaGGGGCACCGTGCAGTGGATGACCTTATTCCAGCG +
Preference number: 6 (lower is better)
Translates to: LIEDLEIERVHA*GHRAVDDLIPA
Trigger: CGCTGGAATAAGGTCATCCACTGCACGGTGCCCCCAGGCGTGGACTCTTTCTATCTCGAGATCTTCGATGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000263646.11
ENST00000317204.11
ENST00000527746.5
ENST00000527886.5
ENST00000528719.1
ENST00000530506.5
ENST00000530541.1
CDS CCA 72 bp TGCTTCCTGTGTGCCACATGCACAGCTCTGAGGACATaGCAGGAAAAGCACCGTATCTCCTGGGCACACATG +
Preference number: 6 (lower is better)
Translates to: CFLCATCTALRT*QEKHRISWAHM
Trigger: CATGTGTGCCCAGGAGATACGGTGCTTTTCCTGCCATGTCCTCAGAGCTGTGCATGTGGCACACAGGAAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527085.1
CDS CCA 72 bp GCAGCCCTGCCTGTGCTATCGGAGTACGTGGGGTTTTaGGGACTGGAACTTGTCTTTCTTGTGTCTCCCAAT +
Preference number: 6 (lower is better)
Translates to: AALPVLSEYVGF*GLELVFLVSPN
Trigger: ATTGGGAGACACAAGAAAGACAAGTTCCAGTCCCCAAAACCCCACGTACTCCGATAGCACAGGCAGGGCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527638.1
CDS CCA 72 bp GCACAGCTGAACTCTCCCCTCCTGTGCCCACATCTCTaGACTGCCAGGTCCTCTGTTTTCTATTCTTGTCCA +
Preference number: 6 (lower is better)
Translates to: AQLNSPLLCPHL*TARSSVFYSCP
Trigger: TGGACAAGAATAGAAAACAGAGGACCTGGCAGTCCAGAGATGTGGGCACAGGAGGGGAGAGTTCAGCTGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528719.1
CDS CAA 72 bp AGCAGCCCTGCCTGTGCTATCGGAGTACGTGGGGTTTaGGGGACTGGAACTTGTCTTTCTTGTGTCTCCCAA +
Preference number: 6 (lower is better)
Translates to: SSPACAIGVRGV*GTGTCLSCVSQ
Trigger: TTGGGAGACACAAGAAAGACAAGTTCCAGTCCCCAAAACCCCACGTACTCCGATAGCACAGGCAGGGCTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527638.1
CDS GCA 72 bp TCCCGGTATTTGAAGGCGTCCAGCGCTCCATCTCCTTaGTCTGCACTCTTTAGGTGTCCGTTAAAGACAGTG +
Preference number: 6 (lower is better)
Translates to: SRYLKASSAPSP*SALFRCPLKTV
Trigger: CACTGTCTTTAACGGACACCTAAAGAGTGCAGAGCAAGGAGATGGAGCGCTGGACGCCTTCAAATACCGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527085.1
CDS GCA 72 bp GCGGGAATCAGAAGTTCTGTTTGCCCGCTTAGGAAATaGAGTATAAACGCCGAAATCCGAAATCCCACCCCC +
Preference number: 6 (lower is better)
Translates to: AGIRSSVCPLRK*SINAEIRNPTP
Trigger: GGGGGTGGGATTTCGGATTTCGGCGTTTATACTGCATTTCCTAAGCGGGCAAACAGAACTTCTGATTCCCGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532551.1
CDS GCA 72 bp CTGTTTATTTGTGACAACTGCTTCCTGTGTGCCACATaGACAGCTCTGAGGACATGGCAGGAAAAGCACCGT +
Preference number: 6 (lower is better)
Translates to: LFICDNCFLCAT*TALRTWQEKHR
Trigger: ACGGTGCTTTTCCTGCCATGTCCTCAGAGCTGTGCATGTGGCACACAGGAAGCAGTTGTCACAAATAAACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527085.1
CDS CAA 90 bp CCTGTGCCCACATCTCTGGACTGCCAGGTCCTCTGTTTTCTATTCTaGTCCACATACAAGTTCCCTCCTTTCACTTCTAATCAAAGCTGT +
Preference number: 6 (lower is better)
Translates to: PVPTSLDCQVLCFLF*STYKFPPFTSNQSC
Trigger: ACAGCTTTGATTAGAAGTGAAAGGAGGGAACTTGTATGTGGACAAGAATAGAAAACAGAGGACCTGGCAGTCCAGAGATGTGGGCACAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528719.1
CDS CAA 72 bp CCCACCTACACCCACTACTCATCACTTGAGTTATGTTaGGTAGAACCCGGGGTCAATGCCAATATCTTTCAC +
Preference number: 6 (lower is better)
Translates to: PTYTHYSSLELC*VEPGVNANIFH
Trigger: GTGAAAGATATTGGCATTGACCCCGGGTTCTACCAAACATAACTCAAGTGATGAGTAGTGGGTGTAGGTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532551.1
CDS GCA 72 bp CAGGTTTCAGGAAAAGCGGGAATCAGAAGTTCTGTTTaGCCGCTTAGGAAATGCAGTATAAACGCCGAAATC +
Preference number: 6 (lower is better)
Translates to: QVSGKAGIRSSV*PLRKCSINAEI
Trigger: GATTTCGGCGTTTATACTGCATTTCCTAAGCGGGCAAACAGAACTTCTGATTCCCGCTTTTCCTGAAACCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532551.1
CDS CAA 72 bp ACATCTCTGGACTGCCAGGTCCTCTGTTTTCTATTCTaGTCCACATACAAGTTCCCTCCTTTCACTTCTAAT +
Preference number: 6 (lower is better)
Translates to: TSLDCQVLCFLF*STYKFPPFTSN
Trigger: ATTAGAAGTGAAAGGAGGGAACTTGTATGTGGACAAGAATAGAAAACAGAGGACCTGGCAGTCCAGAGATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528719.1