Pregenerated sensors for TOB2 (Homo sapiens)
Ensembl gene IDs: ENSG00000183864Ensembl transcript IDs: ENST00000327492.4, ENST00000434408.1
Found 12 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 72 bp | TGCTCTCCTATGATCCAATACATCAGGCGGGAGTGCTaGGTCCGTCAGGACACCACTCCTCGCAGCATCAAG | + |
|
Preference number: 3 (lower is better) Translates to: CSPMIQYIRREC*VRQDTTPRSIK Trigger: CTTGATGCTGCGAGGAGTGGTGTCCTGACGGACTCAGCACTCCCGCCTGATGTATTGGATCATAGGAGAGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000327492.4 |
||
| CDS GCA 90 bp | CCTGGGCCATGTCAAAGCTGCTGCTGTTGCAGGTGCCAGCCCCACTaGCTCCAAACGGGCCTGGGGTGCCGCTGCCCTGGCCATCGGCCG | + |
|
Preference number: 5 (lower is better) Translates to: PGPCQSCCCCRCQPH*LQTGLGCRCPGHRP Trigger: CGGCCGATGGCCAGGGCAGCGGCACCCCAGGCCCGTTTGGAGGCAGTGGGGCTGGCACCTGCAACAGCAGCAGCTTTGACATGGCCCAGG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000327492.4 |
||
| CDS CCA 72 bp | GGGCGGGCGGGCGGACTAGCGGCGACGACGCGGGGATaGCGGATCGGAGGGTGGTTCGTGTCGCGCAACGGC | + |
|
Preference number: 6 (lower is better) Translates to: GRAGGLAATTRG*RIGGWFVSRNG Trigger: GCCGTTGCGCGACACGAACCACCCTCCGATCCGCCATCCCCGCGTCGTCGCCGCTAGTCCGCCCGCCCGCCC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000327492.4 ENST00000434408.1 |
||
| CDS CCA 72 bp | GGTATGGGCTGTCGCCGGCAGACGGTCCTGCCCTCCTaGCCCCGCGTCGCCCGAGCCACGGCTTGCCTCAGC | + |
|
Preference number: 6 (lower is better) Translates to: GMGCRRQTVLPS*PRVARATACLS Trigger: GCTGAGGCAAGCCGTGGCTCGGGCGACGCGGGGCCAGGAGGGCAGGACCGTCTGCCGGCGACAGCCCATACC 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000327492.4 ENST00000434408.1 |
||
| CDS CCA 72 bp | CGGAGGGTGGTTCGTGTCGCGCAACGGCAGACGGTATaGGCTGTCGCCGGCAGACGGTCCTGCCCTCCTGGC | + |
|
Preference number: 6 (lower is better) Translates to: RRVVRVAQRQTV*AVAGRRSCPPG Trigger: GCCAGGAGGGCAGGACCGTCTGCCGGCGACAGCCCATACCGTCTGCCGTTGCGCGACACGAACCACCCTCCG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000327492.4 ENST00000434408.1 |
||
| CDS CCA 72 bp | CTAGCGGCGACGACGCGGGGATGGCGGATCGGAGGGTaGTTCGTGTCGCGCAACGGCAGACGGTATGGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: LAATTRGWRIGG*FVSRNGRRYGL Trigger: CAGCCCATACCGTCTGCCGTTGCGCGACACGAACCACCCTCCGATCCGCCATCCCCGCGTCGTCGCCGCTAG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000327492.4 ENST00000434408.1 |
||
| CDS CCA 72 bp | CGCTGCCCTGGCCATCGGCCGCATCAAAGAAGAGGCTaGGTGAGCCACCACCGTTGTACACGAACTCCTTGG | + |
|
Preference number: 6 (lower is better) Translates to: RCPGHRPHQRRG*VSHHRCTRTPW Trigger: CCAAGGAGTTCGTGTACAACGGTGGTGGCTCACCCAGCCTCTTCTTTGATGCGGCCGATGGCCAGGGCAGCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000327492.4 |
||
| CDS CAA 72 bp | GGCACGAACACCTGGGCGTCAGGGTTGAAGCTGCTCTaGATCTCCTTGTCCAGCTCTGGGGCACCGCAACCC | + |
|
Preference number: 6 (lower is better) Translates to: GTNTWASGLKLL*ISLSSSGAPQP Trigger: GGGTTGCGGTGCCCCAGAGCTGGACAAGGAGATCAAGAGCAGCTTCAACCCTGACGCCCAGGTGTTCGTGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000327492.4 |
||
| CDS CAA 90 bp | CTGCCAATGGGCACGAACACCTGGGCGTCAGGGTTGAAGCTGCTCTaGATCTCCTTGTCCAGCTCTGGGGCACCGCAACCCTCACTGTCA | + |
|
Preference number: 6 (lower is better) Translates to: LPMGTNTWASGLKLL*ISLSSSGAPQPSLS Trigger: TGACAGTGAGGGTTGCGGTGCCCCAGAGCTGGACAAGGAGATCAAGAGCAGCTTCAACCCTGACGCCCAGGTGTTCGTGCCCATTGGCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000327492.4 |
||
| CDS TCA 72 bp | GCCCTGGCCATCGGCCGCATCAAAGAAGAGGCTGGGTaGGCCACCACCGTTGTACACGAACTCCTTGGCATT | + |
|
Preference number: 6 (lower is better) Translates to: ALAIGRIKEEAG*ATTVVHELLGI Trigger: AATGCCAAGGAGTTCGTGTACAACGGTGGTGGCTCACCCAGCCTCTTCTTTGATGCGGCCGATGGCCAGGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000327492.4 |
||
| CDS CAA 72 bp | GCCGCATCAAAGAAGAGGCTGGGTGAGCCACCACCGTaGTACACGAACTCCTTGGCATTGGGTGAGAGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: AASKKRLGEPPP*YTNSLALGESW Trigger: CCAGCTCTCACCCAATGCCAAGGAGTTCGTGTACAACGGTGGTGGCTCACCCAGCCTCTTCTTTGATGCGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000327492.4 |
||
| CDS GCA 72 bp | AAGTTCAGTGAATGCATAGACAGAGAGAGGCTCTTGTaGTTCAGCAGGCTGTTGGTGGGTGAGCGGGCCATG | + |
|
Preference number: 6 (lower is better) Translates to: KFSECIDRERLL*FSRLLVGERAM Trigger: CATGGCCCGCTCACCCACCAACAGCCTGCTGAAGCACAAGAGCCTCTCTCTGTCTATGCATTCACTGAACTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000327492.4 |
||