RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TNS1 (Homo sapiens)

Ensembl gene IDs: ENSG00000079308

Ensembl transcript IDs: ENST00000171887.8, ENST00000310858.10, ENST00000413280.5, ENST00000413554.5, ENST00000419504.5, ENST00000430930.5, ENST00000439083.5, ENST00000446688.5, ENST00000446903.5, ENST00000453356.1, ENST00000465306.1, ENST00000479185.1, ENST00000480416.1, ENST00000480665.1, ENST00000490566.1, ENST00000492338.2, ENST00000495556.1, ENST00000611415.4, ENST00000615025.4, ENST00000615025.5, ENST00000646520.1, ENST00000649572.1, ENST00000651849.1, ENST00000682258.1

Found 2944 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GTCCTCCCGCAGGGGCACACATGGCTCAGGCTGGAGTGGAGGGGCTaGCCATGCATGCAAGGTGGGCTGTGGTGGGTGGTGAGGAAGGGA +
Preference number: 1 (lower is better)
Translates to: VLPQGHTWLRLEWRG*PCMQGGLWWVVRKG
Trigger: TCCCTTCCTCACCACCCACCACAGCCCACCTTGCATGCATGGCCAGCCCCTCCACTCCAGCCTGAGCCATGTGTGCCCCTGCGGGAGGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
3UTR CCA 90 bp CATGAATGGGTCCTCCCGCAGGGGCACACATGGCTCAGGCTGGAGTaGAGGGGCTGGCCATGCATGCAAGGTGGGCTGTGGTGGGTGGTG +
Preference number: 1 (lower is better)
Translates to: HEWVLPQGHTWLRLE*RGWPCMQGGLWWVV
Trigger: CACCACCCACCACAGCCCACCTTGCATGCATGGCCAGCCCCTCCACTCCAGCCTGAGCCATGTGTGCCCCTGCGGGAGGACCCATTCATG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
3UTR TCA 90 bp CTTCCCTCCAGACACCCAGCTGGACAGCTGGTGGCAGCACGGGACTaGACCTGCTGGGGTCTGCGTCGCTGCGATGTCCATGACTCCCTG +
Preference number: 1 (lower is better)
Translates to: LPSRHPAGQLVAARD*TCWGLRRCDVHDSL
Trigger: CAGGGAGTCATGGACATCGCAGCGACGCAGACCCCAGCAGGTTCAGTCCCGTGCTGCCACCAGCTGTCCAGCTGGGTGTCTGGAGGGAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
3UTR CCA 90 bp GCCCGAGGCCCCCACCCTGCCCCTCTGGGTGAACCACTTCTCACCTaGGCTATCGCTGAGACTCCACCAATTGGTTGGCCTACAGGCCTC +
Preference number: 1 (lower is better)
Translates to: ARGPHPAPLGEPLLT*AIAETPPIGWPTGL
Trigger: GAGGCCTGTAGGCCAACCAATTGGTGGAGTCTCAGCGATAGCCCAGGTGAGAAGTGGTTCACCCAGAGGGGCAGGGTGGGGGCCTCGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
3UTR GCA 90 bp GGCCAAGGCAGGACAGGGCGATGCCATTGCAGACCCTCCCACTCCTaGTGGGGTCTTTGTAGAAGAGAAGGGTCTGGCGGCACCCAGGGT +
Preference number: 1 (lower is better)
Translates to: GQGRTGRCHCRPSHS*WGLCRREGSGGTQG
Trigger: ACCCTGGGTGCCGCCAGACCCTTCTCTTCTACAAAGACCCCAGCAGGAGTGGGAGGGTCTGCAATGGCATCGCCCTGTCCTGCCTTGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000615025.4
ENST00000646520.1
ENST00000651849.1
3UTR TCA 90 bp CTCCTTCCGCAGGGATGCTGGGAGGGAGTTACCAGCTTTCTGGCATaGATGGGTCCTCCCGCAGGGGCACACATGGCTCAGGCTGGAGTG +
Preference number: 1 (lower is better)
Translates to: LLPQGCWEGVTSFLA*MGPPAGAHMAQAGV
Trigger: CACTCCAGCCTGAGCCATGTGTGCCCCTGCGGGAGGACCCATTCATGCCAGAAAGCTGGTAACTCCCTCCCAGCATCCCTGCGGAAGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
3UTR GCA 90 bp CCATACACACCCATGTCCCCGCATGCTCACACACTCGCTCAGGCCTaGAGAGTCAGGGACAGCTCCCCACACATCCTGGGAGCTGACTGC +
Preference number: 1 (lower is better)
Translates to: PYTPMSPHAHTLAQA*RVRDSSPHILGADC
Trigger: GCAGTCAGCTCCCAGGATGTGTGGGGAGCTGTCCCTGACTCTGCAGGCCTGAGCGAGTGTGTGAGCATGCGGGGACATGGGTGTGTATGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
3UTR CCA 90 bp CAAGGCAGGACAGGGCGATGCCATTGCAGACCCTCCCACTCCTGCTaGGGTCTTTGTAGAAGAGAAGGGTCTGGCGGCACCCAGGGTCAC +
Preference number: 1 (lower is better)
Translates to: QGRTGRCHCRPSHSC*GLCRREGSGGTQGH
Trigger: GTGACCCTGGGTGCCGCCAGACCCTTCTCTTCTACAAAGACCCCAGCAGGAGTGGGAGGGTCTGCAATGGCATCGCCCTGTCCTGCCTTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000615025.4
ENST00000646520.1
ENST00000651849.1
3UTR CCA 90 bp TTACCAGCTTTCTGGCATGAATGGGTCCTCCCGCAGGGGCACACATaGCTCAGGCTGGAGTGGAGGGGCTGGCCATGCATGCAAGGTGGG +
Preference number: 1 (lower is better)
Translates to: LPAFWHEWVLPQGHT*LRLEWRGWPCMQGG
Trigger: CCCACCTTGCATGCATGGCCAGCCCCTCCACTCCAGCCTGAGCCATGTGTGCCCCTGCGGGAGGACCCATTCATGCCAGAAAGCTGGTAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
3UTR CCA 90 bp TTCCGCAGGGATGCTGGGAGGGAGTTACCAGCTTTCTGGCATGAATaGGTCCTCCCGCAGGGGCACACATGGCTCAGGCTGGAGTGGAGG +
Preference number: 1 (lower is better)
Translates to: FRRDAGRELPAFWHE*VLPQGHTWLRLEWR
Trigger: CCTCCACTCCAGCCTGAGCCATGTGTGCCCCTGCGGGAGGACCCATTCATGCCAGAAAGCTGGTAACTCCCTCCCAGCATCCCTGCGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
3UTR GCA 90 bp ACCGTGAAAGCTGACCCCAGACTCAGTCCTGGGCCCCAGCCAGGCTaGTTGAAGGGTCTGATACACCGCCCAGCCTCAAGTGTGGACAGA +
Preference number: 1 (lower is better)
Translates to: TVKADPRLSPGPQPG*LKGLIHRPASSVDR
Trigger: TCTGTCCACACTTGAGGCTGGGCGGTGTATCAGACCCTTCAAGCAGCCTGGCTGGGGCCCAGGACTGAGTCTGGGGTCAGCTTTCACGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
3UTR CCA 90 bp ACTGACTCCTTCCGCAGGGATGCTGGGAGGGAGTTACCAGCTTTCTaGCATGAATGGGTCCTCCCGCAGGGGCACACATGGCTCAGGCTG +
Preference number: 1 (lower is better)
Translates to: TDSFRRDAGRELPAF*HEWVLPQGHTWLRL
Trigger: CAGCCTGAGCCATGTGTGCCCCTGCGGGAGGACCCATTCATGCCAGAAAGCTGGTAACTCCCTCCCAGCATCCCTGCGGAAGGAGTCAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
3UTR CCA 90 bp GAACCACTTCTCACCTGGGCTATCGCTGAGACTCCACCAATTGGTTaGCCTACAGGCCTCACCTCCCGACTCCCCTCACTGCTGGGCGAC +
Preference number: 1 (lower is better)
Translates to: EPLLTWAIAETPPIG*PTGLTSRLPSLLGD
Trigger: GTCGCCCAGCAGTGAGGGGAGTCGGGAGGTGAGGCCTGTAGGCCAACCAATTGGTGGAGTCTCAGCGATAGCCCAGGTGAGAAGTGGTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
3UTR TCA 90 bp AGCACGGGACTGAACCTGCTGGGGTCTGCGTCGCTGCGATGTCCATaGCTCCCTGGCTCTTTGTTGCCCATCTTCTCCCAGACCCTTTCC +
Preference number: 1 (lower is better)
Translates to: STGLNLLGSASLRCP*LPGSLLPIFSQTLS
Trigger: GGAAAGGGTCTGGGAGAAGATGGGCAACAAAGAGCCAGGGAGTCATGGACATCGCAGCGACGCAGACCCCAGCAGGTTCAGTCCCGTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
3UTR GCA 90 bp ACTGTCCAGTGGACCTTAGGCCCTTTGGCCCAAGTGCAAGCCTTCTaGCCTCTGCTGCATGGGCAGCGTGGCTCAGCTAGGGAAACCAAG +
Preference number: 1 (lower is better)
Translates to: TVQWTLGPLAQVQAF*PLLHGQRGSARETK
Trigger: CTTGGTTTCCCTAGCTGAGCCACGCTGCCCATGCAGCAGAGGGCAGAAGGCTTGCACTTGGGCCAAAGGGCCTAAGGTCCACTGGACAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000646520.1
ENST00000651849.1
3UTR GCA 90 bp CTCCTGAGAGCCGTTTATAGGGGGATCACACTTGTCCAGGAGGGCTaGCCCTCCTGCTTTCACACAACCACTGGCCCCACCATCCCTCTC +
Preference number: 1 (lower is better)
Translates to: LLRAVYRGITLVQEG*PSCFHTTTGPTIPL
Trigger: GAGAGGGATGGTGGGGCCAGTGGTTGTGTGAAAGCAGGAGGGGCAGCCCTCCTGGACAAGTGTGATCCCCCTATAAACGGCTCTCAGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
3UTR GCA 90 bp AGGCTGGCAGCCACTGAAACCTCAGAACAAATTCGCTCCAGCCTCTaGTTTCTGCTTGGCCGCTCAGCGCCCGGGGATGGAGGAGTGCTT +
Preference number: 1 (lower is better)
Translates to: RLAATETSEQIRSSL*FLLGRSAPGDGGVL
Trigger: AAGCACTCCTCCATCCCCGGGCGCTGAGCGGCCAAGCAGAAAGCAGAGGCTGGAGCGAATTTGTTCTGAGGTTTCAGTGGCTGCCAGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453356.1
3UTR CCA 90 bp AAACACAGGGAACCAGAACCACCACGCAGATGGTGGGGAGGCCGCTaGGAGGATTTGAGCTGTCCACTAGAGGCATCGCTGAAGCCCACC +
Preference number: 1 (lower is better)
Translates to: KHREPEPPRRWWGGR*EDLSCPLEASLKPT
Trigger: GGTGGGCTTCAGCGATGCCTCTAGTGGACAGCTCAAATCCTCCCAGCGGCCTCCCCACCATCTGCGTGGTGGTTCTGGTTCCCTGTGTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646520.1
3UTR GCA 90 bp TGGGGTCTGCGTCGCTGCGATGTCCATGACTCCCTGGCTCTTTGTTaGCCATCTTCTCCCAGACCCTTTCCCATCCCAGCCCATGTTCAA +
Preference number: 1 (lower is better)
Translates to: WGLRRCDVHDSLALC*PSSPRPFPIPAHVQ
Trigger: TTGAACATGGGCTGGGATGGGAAAGGGTCTGGGAGAAGATGGGCAACAAAGAGCCAGGGAGTCATGGACATCGCAGCGACGCAGACCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
3UTR CCA 90 bp GCCCCACACAGTCTAGGGAAGGCCAAGGCCAGGGCAAGGAGACCCTaGCTGCTTCAAGAACAAAGGCCCCCTACACTTCAGGCTTTACTT +
Preference number: 1 (lower is better)
Translates to: APHSLGKAKARARRP*LLQEQRPPTLQALL
Trigger: AAGTAAAGCCTGAAGTGTAGGGGGCCTTTGTTCTTGAAGCAGCCAGGGTCTCCTTGCCCTGGCCTTGGCCTTCCCTAGACTGTGTGGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
3UTR TCA 90 bp ACAGAGGGGAGGATAAGGACTCCAGGTTTCTGGCCGGAGCCTCACTaGGCAGAAAGTAGGTTCCCCAGGGAGAATTCCAACACAGGGACC +
Preference number: 1 (lower is better)
Translates to: TEGRIRTPGFWPEPH*AESRFPRENSNTGT
Trigger: GGTCCCTGTGTTGGAATTCTCCCTGGGGAACCTACTTTCTGCTCAGTGAGGCTCCGGCCAGAAACCTGGAGTCCTTATCCTCCCCTCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000646520.1
ENST00000651849.1
3UTR TCA 90 bp CCAGGCGTGGGATATGAACAGAGGTCCTCCAACATTTTGGACATTTaGGGACAGAGGTGCCAAGAGGGACAGATCTGCCCGAGGCCCCCA +
Preference number: 1 (lower is better)
Translates to: PGVGYEQRSSNILDI*GQRCQEGQICPRPP
Trigger: TGGGGGCCTCGGGCAGATCTGTCCCTCTTGGCACCTCTGTCCTCAAATGTCCAAAATGTTGGAGGACCTCTGTTCATATCCCACGCCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
3UTR GCA 90 bp CACCAATTGGTTGGCCTACAGGCCTCACCTCCCGACTCCCCTCACTaGTGGGCGACATTGAATTTGAAGTTCCATTGCCCAGCACCTCCA +
Preference number: 1 (lower is better)
Translates to: HQLVGLQASPPDSPH*WATLNLKFHCPAPP
Trigger: TGGAGGTGCTGGGCAATGGAACTTCAAATTCAATGTCGCCCAGCAGTGAGGGGAGTCGGGAGGTGAGGCCTGTAGGCCAACCAATTGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
3UTR CCA 90 bp TGGATACACATATCTCTACCTCCTCAAACCAAAGCTCCAGGCTTCTaGCCAAGGCAGGACAGGGCGATGCCATTGCAGACCCTCCCACTC +
Preference number: 1 (lower is better)
Translates to: WIHISLPPQTKAPGF*PRQDRAMPLQTLPL
Trigger: GAGTGGGAGGGTCTGCAATGGCATCGCCCTGTCCTGCCTTGGCCAGAAGCCTGGAGCTTTGGTTTGAGGAGGTAGAGATATGTGTATCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000615025.4
ENST00000646520.1
ENST00000651849.1
3UTR GCA 90 bp CCCGACTCCCCTCACTGCTGGGCGACATTGAATTTGAAGTTCCATTaGCCAGCACCTCCAACCCCGACTCCCAAGTTCCCTAAAGAAATG +
Preference number: 1 (lower is better)
Translates to: PDSPHCWATLNLKFH*PAPPTPTPKFPKEM
Trigger: CATTTCTTTAGGGAACTTGGGAGTCGGGGTTGGAGGTGCTGGGCAATGGAACTTCAAATTCAATGTCGCCCAGCAGTGAGGGGAGTCGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
3UTR TCA 90 bp ACAGGCTCATCAGAACAAGGCAGAATCTCCTACTCACTAACCTCCTaGGAGCCGTTTATAGGGGGATCACACTTGTCCAGGAGGGCTGCC +
Preference number: 1 (lower is better)
Translates to: TGSSEQGRISYSLTS*EPFIGGSHLSRRAA
Trigger: GGCAGCCCTCCTGGACAAGTGTGATCCCCCTATAAACGGCTCTCAGGAGGTTAGTGAGTAGGAGATTCTGCCTTGTTCTGATGAGCCTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
3UTR GCA 90 bp CTCCCCTGCTGCACTGCCACCACCAACCCTAATCTTTGGACAGTATaGATGTGTGTCTACAAACACATGGGACAAGGACAAGCCGAGCTG +
Preference number: 1 (lower is better)
Translates to: LPCCTATTNPNLWTV*MCVYKHMGQGQAEL
Trigger: CAGCTCGGCTTGTCCTTGTCCCATGTGTTTGTAGACACACATGCATACTGTCCAAAGATTAGGGTTGGTGGTGGCAGTGCAGCAGGGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000615025.4
ENST00000646520.1
ENST00000651849.1
3UTR CCA 90 bp TTGCACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTaGGTTCAAGAGTGGTCAGGATTCATGGGTCCCCTCCCCACAAGC +
Preference number: 1 (lower is better)
Translates to: LHFLLSSEIGPKSSF*VQEWSGFMGPLPTS
Trigger: GCTTGTGGGGAGGGGACCCATGAATCCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGTGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000615025.4
ENST00000646520.1
ENST00000651849.1
3UTR CCA 90 bp CTTAGAGTCCTTAAATGGTGGTCAGGTGTTTTCCCAACTGTCCAGTaGACCTTAGGCCCTTTGGCCCAAGTGCAAGCCTTCTGCCCTCTG +
Preference number: 1 (lower is better)
Translates to: LRVLKWWSGVFPTVQ*TLGPLAQVQAFCPL
Trigger: CAGAGGGCAGAAGGCTTGCACTTGGGCCAAAGGGCCTAAGGTCCACTGGACAGTTGGGAAAACACCTGACCACCATTTAAGGACTCTAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000646520.1
ENST00000651849.1
3UTR CCA 90 bp GGAGAAGGAATCCTGGCCATTGGTGTCCACAGCTTTCAGAGCTACTaGAGGAGACGCTCAGATGACATGGGTCAAAGGCCTTTCCCAAAC +
Preference number: 1 (lower is better)
Translates to: GEGILAIGVHSFQSY*RRRSDDMGQRPFPN
Trigger: GTTTGGGAAAGGCCTTTGACCCATGTCATCTGAGCGTCTCCTCCAGTAGCTCTGAAAGCTGTGGACACCAATGGCCAGGATTCCTTCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
3UTR TCA 90 bp AACCCTTCCCCATCATTCGCCTTGAAAAGTCACACTCTCAGAAACTaGCTCCTTCCGCAGGGATGCTGGGAGGGAGTTACCAGCTTTCTG +
Preference number: 1 (lower is better)
Translates to: NPSPSFALKSHTLRN*LLPQGCWEGVTSFL
Trigger: CAGAAAGCTGGTAACTCCCTCCCAGCATCCCTGCGGAAGGAGTCAGTTTCTGAGAGTGTGACTTTTCAAGGCGAATGATGGGGAAGGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
3UTR CCA 90 bp GGACATCCCTCTACAGTAACTCCACTGCTGGCAAGAGCCCAGGCGTaGGATATGAACAGAGGTCCTCCAACATTTTGGACATTTGAGGAC +
Preference number: 1 (lower is better)
Translates to: GHPSTVTPLLARAQA*DMNRGPPTFWTFED
Trigger: GTCCTCAAATGTCCAAAATGTTGGAGGACCTCTGTTCATATCCCACGCCTGGGCTCTTGCCAGCAGTGGAGTTACTGTAGAGGGATGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
3UTR TCA 90 bp GGTCTGAAGGGAGGAGAGAAATGGGGAAACACAGCCTGCACACACTaGTGTGCTCTCACACACACGCACAAACAAAACACAGACACAGGA +
Preference number: 1 (lower is better)
Translates to: GLKGGEKWGNTACTH*CALTHTHKQNTDTG
Trigger: TCCTGTGTCTGTGTTTTGTTTGTGCGTGTGTGTGAGAGCACATCAGTGTGTGCAGGCTGTGTTTCCCCATTTCTCTCCTCCCTTCAGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
3UTR GCA 90 bp GAAATGAGCAAAACACACGCACACACATACATCCACACTTGCACATaGGCACACACGTCCTGTGTTACCACTGGCCAAGGAAACGCGAGT +
Preference number: 1 (lower is better)
Translates to: EMSKTHAHTYIHTCT*AHTSCVTTGQGNAS
Trigger: ACTCGCGTTTCCTTGGCCAGTGGTAACACAGGACGTGTGTGCGCATGTGCAAGTGTGGATGTATGTGTGTGCGTGTGTTTTGCTCATTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
3UTR CCA 90 bp TCACTTCCCTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATTaGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCAT +
Preference number: 1 (lower is better)
Translates to: SLPSPHVALSSLLRN*PKVLLLGSRVVRIH
Trigger: ATGAATCCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGGGAAGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000615025.4
ENST00000646520.1
ENST00000651849.1
3UTR GCA 90 bp GAAGGGAGGAGAGAAATGGGGAAACACAGCCTGCACACACTGATGTaGTCTCACACACACGCACAAACAAAACACAGACACAGGAGAGTT +
Preference number: 1 (lower is better)
Translates to: EGRREMGKHSLHTLM*SHTHAQTKHRHRRV
Trigger: AACTCTCCTGTGTCTGTGTTTTGTTTGTGCGTGTGTGTGAGAGCACATCAGTGTGTGCAGGCTGTGTTTCCCCATTTCTCTCCTCCCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
3UTR CCA 90 bp CAAGCAAACAAGTTCTTCCACTTGATGTCCCACGGTGGCTCTGTTTaGTTTGACAACCTACCCCACAGGTGGCCAGAAAAAGATTCTCCC +
Preference number: 1 (lower is better)
Translates to: QANKFFHLMSHGGSV*FDNLPHRWPEKDSP
Trigger: GGGAGAATCTTTTTCTGGCCACCTGTGGGGTAGGTTGTCAAACCAAACAGAGCCACCGTGGGACATCAAGTGGAAGAACTTGTTTGCTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000615025.4
ENST00000646520.1
ENST00000651849.1
3UTR TCA 90 bp AAACAAGTTCTTCCACTTGATGTCCCACGGTGGCTCTGTTTGGTTTaGCAACCTACCCCACAGGTGGCCAGAAAAAGATTCTCCCAGCTT +
Preference number: 1 (lower is better)
Translates to: KQVLPLDVPRWLCLV*QPTPQVARKRFSQL
Trigger: AAGCTGGGAGAATCTTTTTCTGGCCACCTGTGGGGTAGGTTGTCAAACCAAACAGAGCCACCGTGGGACATCAAGTGGAAGAACTTGTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000615025.4
ENST00000646520.1
ENST00000651849.1
3UTR GCA 90 bp CCTAAAGAAATGAGCAAAACACACGCACACACATACATCCACACTTaGACATGCGCACACACGTCCTGTGTTACCACTGGCCAAGGAAAC +
Preference number: 1 (lower is better)
Translates to: PKEMSKTHAHTYIHT*TCAHTSCVTTGQGN
Trigger: GTTTCCTTGGCCAGTGGTAACACAGGACGTGTGTGCGCATGTGCAAGTGTGGATGTATGTGTGTGCGTGTGTTTTGCTCATTTCTTTAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
3UTR CCA 90 bp GGAGTCCTGGTGAATTTTCCATTCTGGCTTAGAGTCCTTAAATGGTaGTCAGGTGTTTTCCCAACTGTCCAGTGGACCTTAGGCCCTTTG +
Preference number: 1 (lower is better)
Translates to: GVLVNFPFWLRVLKW*SGVFPTVQWTLGPL
Trigger: CAAAGGGCCTAAGGTCCACTGGACAGTTGGGAAAACACCTGACCACCATTTAAGGACTCTAAGCCAGAATGGAAAATTCACCAGGACTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000646520.1
ENST00000651849.1
3UTR CCA 90 bp GAAACCCAGATATTTGGCTTGAATAACCCAGAAGGAAGAGCACTTTaGAGGGACTTTGGTCACCAGGCACAAGGTTTCACTCTGGGAAGC +
Preference number: 1 (lower is better)
Translates to: ETQIFGLNNPEGRAL*RDFGHQAQGFTLGS
Trigger: GCTTCCCAGAGTGAAACCTTGTGCCTGGTGACCAAAGTCCCTCCAAAGTGCTCTTCCTTCTGGGTTATTCAAGCCAAATATCTGGGTTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
3UTR GCA 90 bp CACCCACACGACAATATAGTGGAGGCACAGCAAAGAGACCTGAGGTaGCTTGGGTCTGAGATACTTTCAAGCAAACAAGTTCTTCCACTT +
Preference number: 1 (lower is better)
Translates to: HPHDNIVEAQQRDLR*LGSEILSSKQVLPL
Trigger: AAGTGGAAGAACTTGTTTGCTTGAAAGTATCTCAGACCCAAGGCACCTCAGGTCTCTTTGCTGTGCCTCCACTATATTGTCGTGTGGGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000615025.4
ENST00000646520.1
ENST00000651849.1
3UTR CCA 90 bp AATGGAGTCCTGGTGAATTTTCCATTCTGGCTTAGAGTCCTTAAATaGTGGTCAGGTGTTTTCCCAACTGTCCAGTGGACCTTAGGCCCT +
Preference number: 1 (lower is better)
Translates to: NGVLVNFPFWLRVLK*WSGVFPTVQWTLGP
Trigger: AGGGCCTAAGGTCCACTGGACAGTTGGGAAAACACCTGACCACCATTTAAGGACTCTAAGCCAGAATGGAAAATTCACCAGGACTCCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000646520.1
ENST00000651849.1
3UTR CCA 90 bp TACAAAGGAAGGGGATGGGAAATATCTCCTATCTTGGAAGATAATTaGGGTTTGCTAGGGAATGAGGAGAGGGGGAAACCCAGATATTTG +
Preference number: 1 (lower is better)
Translates to: YKGRGWEISPILEDN*GLLGNEERGKPRYL
Trigger: CAAATATCTGGGTTTCCCCCTCTCCTCATTCCCTAGCAAACCCCAATTATCTTCCAAGATAGGAGATATTTCCCATCCCCTTCCTTTGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
3UTR CCA 90 bp AACAAAACACAGACACAGGAGAGTTTCAAACAGCTTAACACTGATTaGAAAACAAGCTTGGGACATCCCTCTACAGTAACTCCACTGCTG +
Preference number: 1 (lower is better)
Translates to: NKTQTQESFKQLNTD*KTSLGHPSTVTPLL
Trigger: CAGCAGTGGAGTTACTGTAGAGGGATGTCCCAAGCTTGTTTTCCAATCAGTGTTAAGCTGTTTGAAACTCTCCTGTGTCTGTGTTTTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
3UTR GCA 90 bp GTATGTCTCATGTATATATTATATAATATTTATATATCAGTACAATaGCTCTCTCTAGGGGACTCGCATAGGCTTAAGAATGGAGTCCTG +
Preference number: 1 (lower is better)
Translates to: VCLMYILYNIYISVQ*LSLGDSHRLKNGVL
Trigger: CAGGACTCCATTCTTAAGCCTATGCGAGTCCCCTAGAGAGAGGCATTGTACTGATATATAAATATTATATAATATATACATGAGACATAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000646520.1
ENST00000651849.1
3UTR-3UTR GCA 90 bp GTGTGCATGGGTGCACAGCCCGCCGTGACACAGAAGGGCTCTGGTGCAGGGCCCGTAGGCGATGTGGTGTaGAGGCAGCAGGCCCAGGAG +
Preference number: 2 (lower is better)
Translates to: VCMGAQPAVTQKGSGAGPVGDVV*RQQAQE
Trigger: CTCCTGGGCCTGCTGCCTGCACACCACATCGCCTAC...GGGCCCTGCACCAGAGCCCTTCTGTGTCACGGCGGGCTGTGCACCCATGCACAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
3UTR-3UTR TCA 90 bp GTGTGCATGGGTGCACAGCCCGCCGTGACACAGAAGGGCTCTGGTGCAGGGCCCGGGCCCCTGGCTTGCTaGAAAGTAAGGGGGCCAAAG +
Preference number: 2 (lower is better)
Translates to: VCMGAQPAVTQKGSGAGPGPLAC*KVRGPK
Trigger: CTTTGGCCCCCTTACTTTTCAGCAAGCCAGGGGCCC...GGGCCCTGCACCAGAGCCCTTCTGTGTCACGGCGGGCTGTGCACCCATGCACAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
3UTR-3UTR TCA 90 bp CATGGGTGCACAGCCCGCCGTGACACAGAAGGGCTCTGGTGCAGGGCCCAGAGGACCAGCTTTCTGGCATaGATGGGTCCTCCCGCAGGG +
Preference number: 2 (lower is better)
Translates to: HGCTARRDTEGLWCRAQRTSFLA*MGPPAG
Trigger: CCCTGCGGGAGGACCCATTCATGCCAGAAAGCTGGT...CCTCTGGGCCCTGCACCAGAGCCCTTCTGTGTCACGGCGGGCTGTGCACCCATG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
3UTR-3UTR GCA 90 bp CATGGGTGCACAGCCCGCCGTGACACAGAAGGGCTCTGGTGCAGGGCCCAGAGGACCCATGTCCCCGCATaGTCACACACTCGCTCAGGC +
Preference number: 2 (lower is better)
Translates to: HGCTARRDTEGLWCRAQRTHVPA*SHTRSG
Trigger: GCCTGAGCGAGTGTGTGAGCATGCGGGGACATGGGT...CCTCTGGGCCCTGCACCAGAGCCCTTCTGTGTCACGGCGGGCTGTGCACCCATG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
3UTR-3UTR CCA 90 bp CATGGGTGCACAGCCCGCCGTGACACAGAAGGGCTCTGGTGCAGGGCCCAGAGGAAGGGGGCCAAAGGCTaGGACATGTGCAACCCCTCC +
Preference number: 2 (lower is better)
Translates to: HGCTARRDTEGLWCRAQRKGAKG*DMCNPS
Trigger: GGAGGGGTTGCACATGTCCCAGCCTTTGGCCCCCTT...CCTCTGGGCCCTGCACCAGAGCCCTTCTGTGTCACGGCGGGCTGTGCACCCATG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
3UTR-3UTR CCA 90 bp CATGGGTGCACAGCCCGCCGTGACACAGAAGGGCTCTGGTGCAGGGCCCAGAGGGCTTTCTGGCATGAATaGGTCCTCCCGCAGGGGCAC +
Preference number: 2 (lower is better)
Translates to: HGCTARRDTEGLWCRAQRAFWHE*VLPQGH
Trigger: GTGCCCCTGCGGGAGGACCCATTCATGCCAGAAAGC...CCTCTGGGCCCTGCACCAGAGCCCTTCTGTGTCACGGCGGGCTGTGCACCCATG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
3UTR-3UTR GCA 90 bp GTGTGCATGGGTGCACAGCCCGCCGTGACACAGAAGGGCTCTGGTGCAGGGCCCCAAGTGCAAGCCTTCTaGCCTCTGCTGCATGGGCAG +
Preference number: 2 (lower is better)
Translates to: VCMGAQPAVTQKGSGAGPQVQAF*PLLHGQ
Trigger: CTGCCCATGCAGCAGAGGGCAGAAGGCTTGCACTTG...GGGCCCTGCACCAGAGCCCTTCTGTGTCACGGCGGGCTGTGCACCCATGCACAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
3UTR-3UTR CCA 90 bp GTGTGCATGGGTGCACAGCCCGCCGTGACACAGAAGGGCTCTGGTGCAGGGCCCCACAAGGTTTCACTCTaGGAAGCAGGGGGTGGCCAG +
Preference number: 2 (lower is better)
Translates to: VCMGAQPAVTQKGSGAGPHKVSL*EAGGGQ
Trigger: CTGGCCACCCCCTGCTTCCCAGAGTGAAACCTTGTG...GGGCCCTGCACCAGAGCCCTTCTGTGTCACGGCGGGCTGTGCACCCATGCACAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
3UTR-3UTR CCA 90 bp CTGGACAGCTGGTGGCAGCACGGGACTGAACCTGCTGGGGTCTGCGTCGCTGCGCCAGGAATAGGCTCCTaGGCTCTCCAGTGGGAGATG +
Preference number: 2 (lower is better)
Translates to: LDSWWQHGTEPAGVCVAAPGIGS*ALQWEM
Trigger: CATCTCCCACTGGAGAGCCCAGGAGCCTATTCCTGG...CGCAGCGACGCAGACCCCAGCAGGTTCAGTCCCGTGCTGCCACCAGCTGTCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
3UTR-3UTR GCA 90 bp GTGTGCATGGGTGCACAGCCCGCCGTGACACAGAAGGGCTCTGGTGCAGGGCCCTCCCTCTCCCCACGTTaGACTTTCTTCTCTCCTCCG +
Preference number: 2 (lower is better)
Translates to: VCMGAQPAVTQKGSGAGPSLSPR*TFFSPP
Trigger: CGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGGGA...GGGCCCTGCACCAGAGCCCTTCTGTGTCACGGCGGGCTGTGCACCCATGCACAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
3UTR-3UTR GCA 90 bp CATGGGTGCACAGCCCGCCGTGACACAGAAGGGCTCTGGTGCAGGGCCCAGAGGTTTCCCCCTCCCCTCTaGAATTCACTTCCCTCTCCC +
Preference number: 2 (lower is better)
Translates to: HGCTARRDTEGLWCRAQRFPPPL*NSLPSP
Trigger: GGGAGAGGGAAGTGAATTGCAGAGGGGAGGGGGAAA...CCTCTGGGCCCTGCACCAGAGCCCTTCTGTGTCACGGCGGGCTGTGCACCCATG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
3UTR-3UTR GCA 90 bp CTGGACAGCTGGTGGCAGCACGGGACTGAACCTGCTGGGGTCTGCGTCGCTGCGTCCCTGGCTCTTTGTTaGCCATCTTCTCCCAGACCC +
Preference number: 2 (lower is better)
Translates to: LDSWWQHGTEPAGVCVAASLALC*PSSPRP
Trigger: GGGTCTGGGAGAAGATGGGCAACAAAGAGCCAGGGA...CGCAGCGACGCAGACCCCAGCAGGTTCAGTCCCGTGCTGCCACCAGCTGTCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
3UTR-3UTR TCA 90 bp GTGAGGAAGGGAAAAGCGACCGTGAAAGCTGACCCCAGACTCAGTCCTGGGCCCACACATCCTGGGAGCTaGCTGCTGGGCCCCTGGCTT +
Preference number: 2 (lower is better)
Translates to: VRKGKATVKADPRLSPGPTHPGS*LLGPWL
Trigger: AAGCCAGGGGCCCAGCAGTCAGCTCCCAGGATGTGT...GGGCCCAGGACTGAGTCTGGGGTCAGCTTTCACGGTCGCTTTTCCCTTCCTCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
3UTR-3UTR TCA 90 bp CGCAGGGATGCTGGGAGGGAGTTACCAGCTTTCTGGCATGAATGGGTCCTCCCGGGCTGTGGTGGGTGGTaGGGAAGGGAAAAGCGACCG +
Preference number: 2 (lower is better)
Translates to: RRDAGRELPAFWHEWVLPGCGGW*GREKRP
Trigger: CGGTCGCTTTTCCCTTCCTCACCACCCACCACAGCC...CGGGAGGACCCATTCATGCCAGAAAGCTGGTAACTCCCTCCCAGCATCCCTGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
3UTR-3UTR TCA 90 bp GCTATCGCTGAGACTCCACCAATTGGTTGGCCTACAGGCCTCACCTCCCGACTCGTGCACAGCCCGCCGTaGCACAGAAGGGCTCTGGTG +
Preference number: 2 (lower is better)
Translates to: AIAETPPIGWPTGLTSRLVHSPP*HRRALV
Trigger: CACCAGAGCCCTTCTGTGTCACGGCGGGCTGTGCAC...GAGTCGGGAGGTGAGGCCTGTAGGCCAACCAATTGGTGGAGTCTCAGCGATAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
3UTR-3UTR GCA 90 bp GTGTGCATGGGTGCACAGCCCGCCGTGACACAGAAGGGCTCTGGTGCAGGGCCCAGACCCTCCCACTCCTaGTGGGGTCTTTGTAGAAGA +
Preference number: 2 (lower is better)
Translates to: VCMGAQPAVTQKGSGAGPRPSHS*WGLCRR
Trigger: TCTTCTACAAAGACCCCAGCAGGAGTGGGAGGGTCT...GGGCCCTGCACCAGAGCCCTTCTGTGTCACGGCGGGCTGTGCACCCATGCACAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
3UTR-3UTR GCA 90 bp CGCAGGGATGCTGGGAGGGAGTTACCAGCTTTCTGGCATGAATGGGTCCTCCCGGGCAGGACAGGGCGATaGCATTGCAGACCCTCCCAC +
Preference number: 2 (lower is better)
Translates to: RRDAGRELPAFWHEWVLPGRTGR*HCRPSH
Trigger: GTGGGAGGGTCTGCAATGGCATCGCCCTGTCCTGCC...CGGGAGGACCCATTCATGCCAGAAAGCTGGTAACTCCCTCCCAGCATCCCTGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
3UTR-3UTR CCA 90 bp GAGAAGGGTCTGGCGGCACCCAGGGTCACTAGAGTGCAGGTGCAGGCACCAGGAAGTGGTCAGGATTCATaGGTCCCCTCCCCACAAGCC +
Preference number: 2 (lower is better)
Translates to: EKGLAAPRVTRVQVQAPGSGQDS*VPSPQA
Trigger: GGCTTGTGGGGAGGGGACCCATGAATCCTGACCACT...TCCTGGTGCCTGCACCTGCACTCTAGTGACCCTGGGTGCCGCCAGACCCTTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000615025.4
ENST00000646520.1
ENST00000651849.1
3UTR-3UTR CCA 90 bp GGCTTCTGGCCAAGGCAGGACAGGGCGATGCCATTGCAGACCCTCCCACTCCTGAGTGGTCAGGATTCATaGGTCCCCTCCCCACAAGCC +
Preference number: 2 (lower is better)
Translates to: GFWPRQDRAMPLQTLPLLSGQDS*VPSPQA
Trigger: GGCTTGTGGGGAGGGGACCCATGAATCCTGACCACT...CAGGAGTGGGAGGGTCTGCAATGGCATCGCCCTGTCCTGCCTTGGCCAGAAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000615025.4
ENST00000646520.1
ENST00000651849.1
3UTR-3UTR CCA 90 bp GTGTGCATGGGTGCACAGCCCGCCGTGACACAGAAGGGCTCTGGTGCAGGGCCCCTGTCACCCATAGCTTaGTTGTTTGTCCCTCCCCTG +
Preference number: 2 (lower is better)
Translates to: VCMGAQPAVTQKGSGAGPLSPIA*LFVPPL
Trigger: CAGGGGAGGGACAAACAACCAAGCTATGGGTGACAG...GGGCCCTGCACCAGAGCCCTTCTGTGTCACGGCGGGCTGTGCACCCATGCACAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
3UTR-3UTR CCA 90 bp CTGGACAGCTGGTGGCAGCACGGGACTGAACCTGCTGGGGTCTGCGTCGCTGCGCCCTCCCACTCCTGCTaGGGTCTTTGTAGAAGAGAA +
Preference number: 2 (lower is better)
Translates to: LDSWWQHGTEPAGVCVAAPSHSC*GLCRRE
Trigger: TTCTCTTCTACAAAGACCCCAGCAGGAGTGGGAGGG...CGCAGCGACGCAGACCCCAGCAGGTTCAGTCCCGTGCTGCCACCAGCTGTCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
3UTR-3UTR CCA 90 bp CGCAGGGATGCTGGGAGGGAGTTACCAGCTTTCTGGCATGAATGGGTCCTCCCGCTGGAGTGGAGGGGCTaGCCATGCATGCAAGGTGGG +
Preference number: 2 (lower is better)
Translates to: RRDAGRELPAFWHEWVLPLEWRG*PCMQGG
Trigger: CCCACCTTGCATGCATGGCCAGCCCCTCCACTCCAG...CGGGAGGACCCATTCATGCCAGAAAGCTGGTAACTCCCTCCCAGCATCCCTGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
3UTR CAA 90 bp GGCCTACAGGCCTCACCTCCCGACTCCCCTCACTGCTGGGCGACATaGAATTTGAAGTTCCATTGCCCAGCACCTCCAACCCCGACTCCC +
Preference number: 2 (lower is better)
Translates to: GLQASPPDSPHCWAT*NLKFHCPAPPTPTP
Trigger: GGGAGTCGGGGTTGGAGGTGCTGGGCAATGGAACTTCAAATTCAATGTCGCCCAGCAGTGAGGGGAGTCGGGAGGTGAGGCCTGTAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
3UTR-3UTR TCA 90 bp GTGAGGAAGGGAAAAGCGACCGTGAAAGCTGACCCCAGACTCAGTCCTGGGCCCTGGCCGGAGCCTCACTaGGCAGAAAGTAGGTTCCCC +
Preference number: 2 (lower is better)
Translates to: VRKGKATVKADPRLSPGPWPEPH*AESRFP
Trigger: GGGGAACCTACTTTCTGCTCAGTGAGGCTCCGGCCA...GGGCCCAGGACTGAGTCTGGGGTCAGCTTTCACGGTCGCTTTTCCCTTCCTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
3UTR-3UTR TCA 90 bp ATTGGTTGGCCTACAGGCCTCACCTCCCGACTCCCCTCACTGCTGGGCGACATTAGCGACCGTGAAAGCTaGCCCCAGACTCAGTCCTGG +
Preference number: 2 (lower is better)
Translates to: IGWPTGLTSRLPSLLGDISDRES*PQTQSW
Trigger: CCAGGACTGAGTCTGGGGTCAGCTTTCACGGTCGCT...AATGTCGCCCAGCAGTGAGGGGAGTCGGGAGGTGAGGCCTGTAGGCCAACCAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
3UTR-3UTR GCA 90 bp GAGAAGGGTCTGGCGGCACCCAGGGTCACTAGAGTGCAGGTGCAGGCACCAGGATTTCCCCCTCCCCTCTaGAATTCACTTCCCTCTCCC +
Preference number: 2 (lower is better)
Translates to: EKGLAAPRVTRVQVQAPGFPPPL*NSLPSP
Trigger: GGGAGAGGGAAGTGAATTGCAGAGGGGAGGGGGAAA...TCCTGGTGCCTGCACCTGCACTCTAGTGACCCTGGGTGCCGCCAGACCCTTCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000615025.4
ENST00000646520.1
ENST00000651849.1
3UTR-3UTR GCA 90 bp CCCAACTGTCCAGTGGACCTTAGGCCCTTTGGCCCAAGTGCAAGCCTTCTGCCCCCAGGGTCACTAGAGTaGAGGTGCAGGCACCAGGAG +
Preference number: 2 (lower is better)
Translates to: PNCPVDLRPFGPSASLLPPGSLE*RCRHQE
Trigger: CTCCTGGTGCCTGCACCTGCACTCTAGTGACCCTGG...GGGCAGAAGGCTTGCACTTGGGCCAAAGGGCCTAAGGTCCACTGGACAGTTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000646520.1
ENST00000651849.1
3UTR-3UTR GCA 90 bp CGCAGGGATGCTGGGAGGGAGTTACCAGCTTTCTGGCATGAATGGGTCCTCCCGCCAGGGTCACTAGAGTaGAGGTGCAGGCACCAGGAG +
Preference number: 2 (lower is better)
Translates to: RRDAGRELPAFWHEWVLPPGSLE*RCRHQE
Trigger: CTCCTGGTGCCTGCACCTGCACTCTAGTGACCCTGG...CGGGAGGACCCATTCATGCCAGAAAGCTGGTAACTCCCTCCCAGCATCCCTGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
3UTR-3UTR GCA 90 bp TCTGCCCTCTGCTGCATGGGCAGCGTGGCTCAGCTAGGGAAACCAAGGCAGAAAGGCAGGACAGGGCGATaGCATTGCAGACCCTCCCAC +
Preference number: 2 (lower is better)
Translates to: SALCCMGSVAQLGKPRQKGRTGR*HCRPSH
Trigger: GTGGGAGGGTCTGCAATGGCATCGCCCTGTCCTGCC...TTTCTGCCTTGGTTTCCCTAGCTGAGCCACGCTGCCCATGCAGCAGAGGGCAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000646520.1
ENST00000651849.1
3UTR CAA 90 bp GTGAAAGCTGACCCCAGACTCAGTCCTGGGCCCCAGCCAGGCTGCTaGAAGGGTCTGATACACCGCCCAGCCTCAAGTGTGGACAGAACA +
Preference number: 2 (lower is better)
Translates to: VKADPRLSPGPQPGC*KGLIHRPASSVDRT
Trigger: TGTTCTGTCCACACTTGAGGCTGGGCGGTGTATCAGACCCTTCAAGCAGCCTGGCTGGGGCCCAGGACTGAGTCTGGGGTCAGCTTTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
3UTR CAA 90 bp TGGGTGAACCACTTCTCACCTGGGCTATCGCTGAGACTCCACCAATaGGTTGGCCTACAGGCCTCACCTCCCGACTCCCCTCACTGCTGG +
Preference number: 2 (lower is better)
Translates to: WVNHFSPGLSLRLHQ*VGLQASPPDSPHCW
Trigger: CCAGCAGTGAGGGGAGTCGGGAGGTGAGGCCTGTAGGCCAACCAATTGGTGGAGTCTCAGCGATAGCCCAGGTGAGAAGTGGTTCACCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
3UTR CAA 90 bp GAACCAGAACCACCACGCAGATGGTGGGGAGGCCGCTGGGAGGATTaGAGCTGTCCACTAGAGGCATCGCTGAAGCCCACCTGGATCTCT +
Preference number: 2 (lower is better)
Translates to: EPEPPRRWWGGRWED*SCPLEASLKPTWIS
Trigger: AGAGATCCAGGTGGGCTTCAGCGATGCCTCTAGTGGACAGCTCAAATCCTCCCAGCGGCCTCCCCACCATCTGCGTGGTGGTTCTGGTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646520.1
3UTR-3UTR TCA 90 bp CGCAGGGATGCTGGGAGGGAGTTACCAGCTTTCTGGCATGAATGGGTCCTCCCGGCAGGTAAGCAGGTCTaGGATAAGGCTGGTCCAGGG +
Preference number: 2 (lower is better)
Translates to: RRDAGRELPAFWHEWVLPAGKQV*DKAGPG
Trigger: CCCTGGACCAGCCTTATCTCAGACCTGCTTACCTGC...CGGGAGGACCCATTCATGCCAGAAAGCTGGTAACTCCCTCCCAGCATCCCTGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
3UTR-3UTR TCA 90 bp TCTCCTGGCCAGTCTCAGAAGACCCAGGGATCCTCAAAAACCAGGGGAGAAGGAGTGCACAGCCCGCCGTaGCACAGAAGGGCTCTGGTG +
Preference number: 2 (lower is better)
Translates to: SPGQSQKTQGSSKTRGEGVHSPP*HRRALV
Trigger: CACCAGAGCCCTTCTGTGTCACGGCGGGCTGTGCAC...TCCTTCTCCCCTGGTTTTTGAGGATCCCTGGGTCTTCTGAGACTGGCCAGGAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
3UTR-3UTR GCA 90 bp GTAGAAGAGAAGGGTCTGGCGGCACCCAGGGTCACTAGAGTGCAGGTGCAGGCATGTTTGTCCCTCCCCTaGTGCACTGCCACCACCAAC +
Preference number: 2 (lower is better)
Translates to: VEEKGLAAPRVTRVQVQACLSLP*CTATTN
Trigger: GTTGGTGGTGGCAGTGCAGCAGGGGAGGGACAAACA...TGCCTGCACCTGCACTCTAGTGACCCTGGGTGCCGCCAGACCCTTCTCTTCTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000615025.4
ENST00000646520.1
ENST00000651849.1
3UTR-3UTR GCA 90 bp CACATGCGCACACACGTCCTGTGTTACCACTGGCCAAGGAAACGCGAGTCTCAGGTAGGCGATGTGGTGTaGAGGCAGCAGGCCCAGGAG +
Preference number: 2 (lower is better)
Translates to: HMRTHVLCYHWPRKRESQVGDVV*RQQAQE
Trigger: CTCCTGGGCCTGCTGCCTGCACACCACATCGCCTAC...CTGAGACTCGCGTTTCCTTGGCCAGTGGTAACACAGGACGTGTGTGCGCATGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
3UTR-3UTR GCA 90 bp GCTATCGCTGAGACTCCACCAATTGGTTGGCCTACAGGCCTCACCTCCCGACTCAAGCCTTCTGCCCTCTaGTGCATGGGCAGCGTGGCT +
Preference number: 2 (lower is better)
Translates to: AIAETPPIGWPTGLTSRLKPSAL*CMGSVA
Trigger: AGCCACGCTGCCCATGCAGCAGAGGGCAGAAGGCTT...GAGTCGGGAGGTGAGGCCTGTAGGCCAACCAATTGGTGGAGTCTCAGCGATAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
3UTR-3UTR CCA 90 bp GAGAAGGGTCTGGCGGCACCCAGGGTCACTAGAGTGCAGGTGCAGGCACCAGGACACGGTGGCTCTGTTTaGTTTGACAACCTACCCCAC +
Preference number: 2 (lower is better)
Translates to: EKGLAAPRVTRVQVQAPGHGGSV*FDNLPH
Trigger: GTGGGGTAGGTTGTCAAACCAAACAGAGCCACCGTG...TCCTGGTGCCTGCACCTGCACTCTAGTGACCCTGGGTGCCGCCAGACCCTTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000615025.4
ENST00000646520.1
ENST00000651849.1
3UTR-3UTR CCA 90 bp TCTGCCCTCTGCTGCATGGGCAGCGTGGCTCAGCTAGGGAAACCAAGGCAGAAACTGAGCCACATGCCTTaGGGAAGACACCCCGAGCTC +
Preference number: 2 (lower is better)
Translates to: SALCCMGSVAQLGKPRQKLSHMP*GRHPEL
Trigger: GAGCTCGGGGTGTCTTCCCCAAGGCATGTGGCTCAG...TTTCTGCCTTGGTTTCCCTAGCTGAGCCACGCTGCCCATGCAGCAGAGGGCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000646520.1
ENST00000651849.1
3UTR-3UTR CCA 90 bp TCTTCTCCCAGACCCTTTCCCATCCCAGCCCATGTTCAAGGCCAGACAGCGCTCCTGGGAGCTGACTGCTaGGCCCCTGGCTTGCTGAAA +
Preference number: 2 (lower is better)
Translates to: SSPRPFPIPAHVQGQTALLGADC*APGLLK
Trigger: TTTCAGCAAGCCAGGGGCCCAGCAGTCAGCTCCCAG...GAGCGCTGTCTGGCCTTGAACATGGGCTGGGATGGGAAAGGGTCTGGGAGAAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
3UTR CAA 90 bp CAGGCCTCACCTCCCGACTCCCCTCACTGCTGGGCGACATTGAATTaGAAGTTCCATTGCCCAGCACCTCCAACCCCGACTCCCAAGTTC +
Preference number: 2 (lower is better)
Translates to: QASPPDSPHCWATLN*KFHCPAPPTPTPKF
Trigger: GAACTTGGGAGTCGGGGTTGGAGGTGCTGGGCAATGGAACTTCAAATTCAATGTCGCCCAGCAGTGAGGGGAGTCGGGAGGTGAGGCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
3UTR-3UTR TCA 90 bp ATGCGCACACACGTCCTGTGTTACCACTGGCCAAGGAAACGCGAGTCTCAGGATACACATCCTGGGAGCTaGCTGCTGGGCCCCTGGCTT +
Preference number: 2 (lower is better)
Translates to: MRTHVLCYHWPRKRESQDTHPGS*LLGPWL
Trigger: AAGCCAGGGGCCCAGCAGTCAGCTCCCAGGATGTGT...ATCCTGAGACTCGCGTTTCCTTGGCCAGTGGTAACACAGGACGTGTGTGCGCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
3UTR-3UTR TCA 90 bp ATTGGTTGGCCTACAGGCCTCACCTCCCGACTCCCCTCACTGCTGGGCGACATTATTGGGTGTCTGCCTTaGCTCACAGGATCTCCCCAG +
Preference number: 2 (lower is better)
Translates to: IGWPTGLTSRLPSLLGDIIGCLP*LTGSPQ
Trigger: CTGGGGAGATCCTGTGAGTCAAGGCAGACACCCAAT...AATGTCGCCCAGCAGTGAGGGGAGTCGGGAGGTGAGGCCTGTAGGCCAACCAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
3UTR-3UTR GCA 90 bp CTGGACAGCTGGTGGCAGCACGGGACTGAACCTGCTGGGGTCTGCGTCGCTGCGTTGGCAAGAATATACTaGAGTGCGGAGTGTTGTGTG +
Preference number: 2 (lower is better)
Translates to: LDSWWQHGTEPAGVCVAALARIY*SAECCV
Trigger: CACACAACACTCCGCACTGCAGTATATTCTTGCCAA...CGCAGCGACGCAGACCCCAGCAGGTTCAGTCCCGTGCTGCCACCAGCTGTCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
3UTR-3UTR CCA 90 bp GAGAAGGGTCTGGCGGCACCCAGGGTCACTAGAGTGCAGGTGCAGGCACCAGGAGTGTCTACAAACACATaGGACAAGGACAAGCCGAGC +
Preference number: 2 (lower is better)
Translates to: EKGLAAPRVTRVQVQAPGVSTNT*DKDKPS
Trigger: GCTCGGCTTGTCCTTGTCCCATGTGTTTGTAGACAC...TCCTGGTGCCTGCACCTGCACTCTAGTGACCCTGGGTGCCGCCAGACCCTTCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000615025.4
ENST00000646520.1
ENST00000651849.1
3UTR-3UTR CCA 90 bp TCTCCTGGCCAGTCTCAGAAGACCCAGGGATCCTCAAAAACCAGGGGAGAAGGACTCCAGACACCCAGCTaGACAGCTGGTGGCAGCACG +
Preference number: 2 (lower is better)
Translates to: SPGQSQKTQGSSKTRGEGLQTPS*TAGGST
Trigger: CGTGCTGCCACCAGCTGTCCAGCTGGGTGTCTGGAG...TCCTTCTCCCCTGGTTTTTGAGGATCCCTGGGTCTTCTGAGACTGGCCAGGAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
3UTR-3UTR TCA 90 bp GCAGACCCTCCCACTCCTGCTGGGGTCTTTGTAGAAGAGAAGGGTCTGGCGGCATGGCTCTGTTTGGTTTaGCAACCTACCCCACAGGTG +
Preference number: 2 (lower is better)
Translates to: ADPPTPAGVFVEEKGLAAWLCLV*QPTPQV
Trigger: CACCTGTGGGGTAGGTTGTCAAACCAAACAGAGCCA...TGCCGCCAGACCCTTCTCTTCTACAAAGACCCCAGCAGGAGTGGGAGGGTCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000615025.4
ENST00000646520.1
ENST00000651849.1
3UTR-3UTR TCA 90 bp GAGAAGGGTCTGGCGGCACCCAGGGTCACTAGAGTGCAGGTGCAGGCACCAGGAGAGGTGCCTTGGGTCTaGGATACTTTCAAGCAAACA +
Preference number: 2 (lower is better)
Translates to: EKGLAAPRVTRVQVQAPGEVPWV*DTFKQT
Trigger: TGTTTGCTTGAAAGTATCTCAGACCCAAGGCACCTC...TCCTGGTGCCTGCACCTGCACTCTAGTGACCCTGGGTGCCGCCAGACCCTTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000615025.4
ENST00000646520.1
ENST00000651849.1
3UTR-3UTR TCA 90 bp TGGTCAGGTGTTTTCCCAACTGTCCAGTGGACCTTAGGCCCTTTGGCCCAAGTGTGGCCGGAGCCTCACTaGGCAGAAAGTAGGTTCCCC +
Preference number: 2 (lower is better)
Translates to: WSGVFPTVQWTLGPLAQVWPEPH*AESRFP
Trigger: GGGGAACCTACTTTCTGCTCAGTGAGGCTCCGGCCA...CACTTGGGCCAAAGGGCCTAAGGTCCACTGGACAGTTGGGAAAACACCTGACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000646520.1
ENST00000651849.1
3UTR-3UTR TCA 90 bp CATGGGTGCACAGCCCGCCGTGACACAGAAGGGCTCTGGTGCAGGGCCCAGAGGAGAATGGAGTCCTGGTaGATTTTCCATTCTGGCTTA +
Preference number: 2 (lower is better)
Translates to: HGCTARRDTEGLWCRAQRRMESW*IFHSGL
Trigger: TAAGCCAGAATGGAAAATTCACCAGGACTCCATTCT...CCTCTGGGCCCTGCACCAGAGCCCTTCTGTGTCACGGCGGGCTGTGCACCCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
3UTR-3UTR GCA 90 bp GGCTTCTGGCCAAGGCAGGACAGGGCGATGCCATTGCAGACCCTCCCACTCCTGCAAAGAGACCTGAGGTaGCTTGGGTCTGAGATACTT +
Preference number: 2 (lower is better)
Translates to: GFWPRQDRAMPLQTLPLLQRDLR*LGSEIL
Trigger: AAGTATCTCAGACCCAAGGCACCTCAGGTCTCTTTG...CAGGAGTGGGAGGGTCTGCAATGGCATCGCCCTGTCCTGCCTTGGCCAGAAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000615025.4
ENST00000646520.1
ENST00000651849.1
3UTR-3UTR GCA 90 bp GGGCGATGCCATTGCAGACCCTCCCACTCCTGCTGGGGTCTTTGTAGAAGAGAATGTTTGTCCCTCCCCTaGTGCACTGCCACCACCAAC +
Preference number: 2 (lower is better)
Translates to: GRCHCRPSHSCWGLCRRECLSLP*CTATTN
Trigger: GTTGGTGGTGGCAGTGCAGCAGGGGAGGGACAAACA...TTCTCTTCTACAAAGACCCCAGCAGGAGTGGGAGGGTCTGCAATGGCATCGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000615025.4
ENST00000646520.1
ENST00000651849.1
3UTR-3UTR GCA 90 bp TTCCTTCGCAGGTCCCCTCTCCATTGTTTTCTCGCCCAATCCTTCCCTCTTGCTCCTTCTGCCCTCTGCTaGATGGGCAGCGTGGCTCAG +
Preference number: 2 (lower is better)
Translates to: FLRRSPLHCFLAQSFPLAPSALC*MGSVAQ
Trigger: CTGAGCCACGCTGCCCATGCAGCAGAGGGCAGAAGG...AGCAAGAGGGAAGGATTGGGCGAGAAAACAATGGAGAGGGGACCTGCGAAGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
3UTR-3UTR CCA 90 bp AAGAGAAGGGTCTGGCGGCACCCAGGGTCACTAGAGTGCAGGTGCAGGCACCAGTTCTGGGTTCAAGAGTaGTCAGGATTCATGGGTCCC +
Preference number: 2 (lower is better)
Translates to: KRRVWRHPGSLECRCRHQFWVQE*SGFMGP
Trigger: GGGACCCATGAATCCTGACCACTCTTGAACCCAGAA...CTGGTGCCTGCACCTGCACTCTAGTGACCCTGGGTGCCGCCAGACCCTTCTCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000615025.4
ENST00000646520.1
ENST00000651849.1
3UTR-3UTR CCA 90 bp GCAGACCCTCCCACTCCTGCTGGGGTCTTTGTAGAAGAGAAGGGTCTGGCGGCAGGAGGGGGTGTTAGGTaGACCTGGTTAGTTTTGGAG +
Preference number: 2 (lower is better)
Translates to: ADPPTPAGVFVEEKGLAAGGGVR*TWLVLE
Trigger: CTCCAAAACTAACCAGGTCCACCTAACACCCCCTCC...TGCCGCCAGACCCTTCTCTTCTACAAAGACCCCAGCAGGAGTGGGAGGGTCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000615025.4
ENST00000646520.1
ENST00000651849.1
3UTR-3UTR CCA 90 bp GCAGACCCTCCCACTCCTGCTGGGGTCTTTGTAGAAGAGAAGGGTCTGGCGGCACACGGTGGCTCTGTTTaGTTTGACAACCTACCCCAC +
Preference number: 2 (lower is better)
Translates to: ADPPTPAGVFVEEKGLAAHGGSV*FDNLPH
Trigger: GTGGGGTAGGTTGTCAAACCAAACAGAGCCACCGTG...TGCCGCCAGACCCTTCTCTTCTACAAAGACCCCAGCAGGAGTGGGAGGGTCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000615025.4
ENST00000646520.1
ENST00000651849.1
3UTR-3UTR CCA 90 bp GTGTGCATGGGTGCACAGCCCGCCGTGACACAGAAGGGCTCTGGTGCAGGGCCCAGAGTCCTTAAATGGTaGTCAGGTGTTTTCCCAACT +
Preference number: 2 (lower is better)
Translates to: VCMGAQPAVTQKGSGAGPRVLKW*SGVFPT
Trigger: AGTTGGGAAAACACCTGACCACCATTTAAGGACTCT...GGGCCCTGCACCAGAGCCCTTCTGTGTCACGGCGGGCTGTGCACCCATGCACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
3UTR-3UTR CCA 90 bp TCTCCTGGCCAGTCTCAGAAGACCCAGGGATCCTCAAAAACCAGGGGAGAAGGAGGCCACTGTGGGGACTaGGGAACCCTTCCCCATCAT +
Preference number: 2 (lower is better)
Translates to: SPGQSQKTQGSSKTRGEGGHCGD*GTLPHH
Trigger: ATGATGGGGAAGGGTTCCCCAGTCCCCACAGTGGCC...TCCTTCTCCCCTGGTTTTTGAGGATCCCTGGGTCTTCTGAGACTGGCCAGGAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
3UTR-3UTR CCA 90 bp TTCCTTCGCAGGTCCCCTCTCCATTGTTTTCTCGCCCAATCCTTCCCTCTTGCTCTCCAGACACCCAGCTaGACAGCTGGTGGCAGCACG +
Preference number: 2 (lower is better)
Translates to: FLRRSPLHCFLAQSFPLALQTPS*TAGGST
Trigger: CGTGCTGCCACCAGCTGTCCAGCTGGGTGTCTGGAG...AGCAAGAGGGAAGGATTGGGCGAGAAAACAATGGAGAGGGGACCTGCGAAGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
3UTR-3UTR TCA 90 bp TCTGCCCTCTGCTGCATGGGCAGCGTGGCTCAGCTAGGGAAACCAAGGCAGAAATGGCTCTGTTTGGTTTaGCAACCTACCCCACAGGTG +
Preference number: 2 (lower is better)
Translates to: SALCCMGSVAQLGKPRQKWLCLV*QPTPQV
Trigger: CACCTGTGGGGTAGGTTGTCAAACCAAACAGAGCCA...TTTCTGCCTTGGTTTCCCTAGCTGAGCCACGCTGCCCATGCAGCAGAGGGCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000646520.1
ENST00000651849.1
3UTR-3UTR TCA 90 bp ACCCTCCTTTCCAACTCCCTGAAACAGAACGTCCACACTGACACAGCTCCTTGGTGGCCGGAGCCTCACTaGGCAGAAAGTAGGTTCCCC +
Preference number: 2 (lower is better)
Translates to: TLLSNSLKQNVHTDTAPWWPEPH*AESRFP
Trigger: GGGGAACCTACTTTCTGCTCAGTGAGGCTCCGGCCA...CCAAGGAGCTGTGTCAGTGTGGACGTTCTGTTTCAGGGAGTTGGAAAGGAGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
3UTR-3UTR TCA 90 bp ATTGGTTGGCCTACAGGCCTCACCTCCCGACTCCCCTCACTGCTGGGCGACATTTCCTTTCCAACTCCCTaGAACAGAACGTCCACACTG +
Preference number: 2 (lower is better)
Translates to: IGWPTGLTSRLPSLLGDISFPTP*NRTSTL
Trigger: CAGTGTGGACGTTCTGTTTCAGGGAGTTGGAAAGGA...AATGTCGCCCAGCAGTGAGGGGAGTCGGGAGGTGAGGCCTGTAGGCCAACCAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
3UTR-3UTR TCA 90 bp GTACAGGAGTGGGGACGCGTCAGTGTACAATACATTCATGTCCAGGATAAGGAGCCCTGCCCCTCTGGGTaGACCACTTCTCACCTGGGC +
Preference number: 2 (lower is better)
Translates to: VQEWGRVSVQYIHVQDKEPCPSG*TTSHLG
Trigger: GCCCAGGTGAGAAGTGGTTCACCCAGAGGGGCAGGG...CTCCTTATCCTGGACATGAATGTATTGTACACTGACGCGTCCCCACTCCTGTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
3UTR-3UTR GCA 90 bp GGGCGATGCCATTGCAGACCCTCCCACTCCTGCTGGGGTCTTTGTAGAAGAGAATCCCTCTCCCCACGTTaGACTTTCTTCTCTCCTCCG +
Preference number: 2 (lower is better)
Translates to: GRCHCRPSHSCWGLCRRESLSPR*TFFSPP
Trigger: CGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGGGA...TTCTCTTCTACAAAGACCCCAGCAGGAGTGGGAGGGTCTGCAATGGCATCGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000615025.4
ENST00000646520.1
ENST00000651849.1
3UTR-3UTR GCA 90 bp TGCAGGCACCAGGAGAGAGCCTCTGTCACCCATAGCTTGGTTGTTTGTCCCTCCTTTCCCCCTCCCCTCTaGAATTCACTTCCCTCTCCC +
Preference number: 2 (lower is better)
Translates to: CRHQERASVTHSLVVCPSFPPPL*NSLPSP
Trigger: GGGAGAGGGAAGTGAATTGCAGAGGGGAGGGGGAAA...GGAGGGACAAACAACCAAGCTATGGGTGACAGAGGCTCTCTCCTGGTGCCTGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000615025.4
ENST00000646520.1
ENST00000651849.1
3UTR-3UTR GCA 90 bp TTCCTTCGCAGGTCCCCTCTCCATTGTTTTCTCGCCCAATCCTTCCCTCTTGCTCCAGGGTCACTAGAGTaGAGGTGCAGGCACCAGGAG +
Preference number: 2 (lower is better)
Translates to: FLRRSPLHCFLAQSFPLAPGSLE*RCRHQE
Trigger: CTCCTGGTGCCTGCACCTGCACTCTAGTGACCCTGG...AGCAAGAGGGAAGGATTGGGCGAGAAAACAATGGAGAGGGGACCTGCGAAGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
3UTR-3UTR GCA 90 bp TCTTCTCCCAGACCCTTTCCCATCCCAGCCCATGTTCAAGGCCAGACAGCGCTCACACGCACCTATGTGTaGCATACACACCCATGTCCC +
Preference number: 2 (lower is better)
Translates to: SSPRPFPIPAHVQGQTALTRTYV*HTHPCP
Trigger: GGGACATGGGTGTGTATGGCACACATAGGTGCGTGT...GAGCGCTGTCTGGCCTTGAACATGGGCTGGGATGGGAAAGGGTCTGGGAGAAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
3UTR-3UTR GCA 90 bp CCAGAACACCGTGATAGCAGGCTGATCAAACCGCTCACTTCCTCCCTGTTTTCCTGGGGTCTGCGTCGCTaGGATGTCCATGACTCCCTG +
Preference number: 2 (lower is better)
Translates to: PEHRDSRLIKPLTSSLFSWGLRR*DVHDSL
Trigger: CAGGGAGTCATGGACATCGCAGCGACGCAGACCCCA...GGAAAACAGGGAGGAAGTGAGCGGTTTGATCAGCCTGCTATCACGGTGTTCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
3UTR-3UTR CCA 90 bp CGCAGGGATGCTGGGAGGGAGTTACCAGCTTTCTGGCATGAATGGGTCCTCCCGTTCTGGGTTCAAGAGTaGTCAGGATTCATGGGTCCC +
Preference number: 2 (lower is better)
Translates to: RRDAGRELPAFWHEWVLPFWVQE*SGFMGP
Trigger: GGGACCCATGAATCCTGACCACTCTTGAACCCAGAA...CGGGAGGACCCATTCATGCCAGAAAGCTGGTAACTCCCTCCCAGCATCCCTGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
3UTR-3UTR CCA 90 bp GCAGACCCTCCCACTCCTGCTGGGGTCTTTGTAGAAGAGAAGGGTCTGGCGGCATCTCTCCTCCGAAATTaGCCCAAAGTCCTCCTTCTG +
Preference number: 2 (lower is better)
Translates to: ADPPTPAGVFVEEKGLAASLLRN*PKVLLL
Trigger: CAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGAGA...TGCCGCCAGACCCTTCTCTTCTACAAAGACCCCAGCAGGAGTGGGAGGGTCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000615025.4
ENST00000646520.1
ENST00000651849.1
3UTR-3UTR CCA 90 bp GTGTGCATGGGTGCACAGCCCGCCGTGACACAGAAGGGCTCTGGTGCAGGGCCCTACAAAGGAAGGGGATaGGAAATATCTCCTATCTTG +
Preference number: 2 (lower is better)
Translates to: VCMGAQPAVTQKGSGAGPYKGRG*EISPIL
Trigger: CAAGATAGGAGATATTTCCCATCCCCTTCCTTTGTA...GGGCCCTGCACCAGAGCCCTTCTGTGTCACGGCGGGCTGTGCACCCATGCACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
3UTR-3UTR CCA 90 bp ATTGGTTGGCCTACAGGCCTCACCTCCCGACTCCCCTCACTGCTGGGCGACATTAGGAATCCTGGCCATTaGTGTCCACAGCTTTCAGAG +
Preference number: 2 (lower is better)
Translates to: IGWPTGLTSRLPSLLGDIRNPGH*CPQLSE
Trigger: CTCTGAAAGCTGTGGACACCAATGGCCAGGATTCCT...AATGTCGCCCAGCAGTGAGGGGAGTCGGGAGGTGAGGCCTGTAGGCCAACCAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
3UTR-3UTR TCA 90 bp GTAGAAGAGAAGGGTCTGGCGGCACCCAGGGTCACTAGAGTGCAGGTGCAGGCAGAGGTGCCTTGGGTCTaGGATACTTTCAAGCAAACA +
Preference number: 2 (lower is better)
Translates to: VEEKGLAAPRVTRVQVQAEVPWV*DTFKQT
Trigger: TGTTTGCTTGAAAGTATCTCAGACCCAAGGCACCTC...TGCCTGCACCTGCACTCTAGTGACCCTGGGTGCCGCCAGACCCTTCTCTTCTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000615025.4
ENST00000646520.1
ENST00000651849.1
3UTR-3UTR TCA 90 bp CGCAGGGATGCTGGGAGGGAGTTACCAGCTTTCTGGCATGAATGGGTCCTCCCGGAGGTGCCTTGGGTCTaGGATACTTTCAAGCAAACA +
Preference number: 2 (lower is better)
Translates to: RRDAGRELPAFWHEWVLPEVPWV*DTFKQT
Trigger: TGTTTGCTTGAAAGTATCTCAGACCCAAGGCACCTC...CGGGAGGACCCATTCATGCCAGAAAGCTGGTAACTCCCTCCCAGCATCCCTGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
3UTR-3UTR TCA 90 bp CCCAACTGTCCAGTGGACCTTAGGCCCTTTGGCCCAAGTGCAAGCCTTCTGCCCGAGGTGCCTTGGGTCTaGGATACTTTCAAGCAAACA +
Preference number: 2 (lower is better)
Translates to: PNCPVDLRPFGPSASLLPEVPWV*DTFKQT
Trigger: TGTTTGCTTGAAAGTATCTCAGACCCAAGGCACCTC...GGGCAGAAGGCTTGCACTTGGGCCAAAGGGCCTAAGGTCCACTGGACAGTTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000646520.1
ENST00000651849.1
3UTR-3UTR TCA 90 bp TTCCTTCGCAGGTCCCCTCTCCATTGTTTTCTCGCCCAATCCTTCCCTCTTGCTGCAGGTAAGCAGGTCTaGGATAAGGCTGGTCCAGGG +
Preference number: 2 (lower is better)
Translates to: FLRRSPLHCFLAQSFPLAAGKQV*DKAGPG
Trigger: CCCTGGACCAGCCTTATCTCAGACCTGCTTACCTGC...AGCAAGAGGGAAGGATTGGGCGAGAAAACAATGGAGAGGGGACCTGCGAAGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
3UTR-3UTR TCA 90 bp GCTATCGCTGAGACTCCACCAATTGGTTGGCCTACAGGCCTCACCTCCCGACTCCAGCGCTCTCCTGGCTaGCACACAGATTCAACAATA +
Preference number: 2 (lower is better)
Translates to: AIAETPPIGWPTGLTSRLQRSPG*HTDSTI
Trigger: TATTGTTGAATCTGTGTGTCAGCCAGGAGAGCGCTG...GAGTCGGGAGGTGAGGCCTGTAGGCCAACCAATTGGTGGAGTCTCAGCGATAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
3UTR-3UTR GCA 90 bp TGGTCAGGTGTTTTCCCAACTGTCCAGTGGACCTTAGGCCCTTTGGCCCAAGTGTCCCTCTCCCCACGTTaGACTTTCTTCTCTCCTCCG +
Preference number: 2 (lower is better)
Translates to: WSGVFPTVQWTLGPLAQVSLSPR*TFFSPP
Trigger: CGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGGGA...CACTTGGGCCAAAGGGCCTAAGGTCCACTGGACAGTTGGGAAAACACCTGACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000646520.1
ENST00000651849.1
3UTR-3UTR GCA 90 bp GTGAGGAAGGGAAAAGCGACCGTGAAAGCTGACCCCAGACTCAGTCCTGGGCCCGAGGCTTTGGGTTTTTaGAGTTTCCATCTACCCAGG +
Preference number: 2 (lower is better)
Translates to: VRKGKATVKADPRLSPGPEALGF*SFHLPR
Trigger: CCTGGGTAGATGGAAACTGCAAAAACCCAAAGCCTC...GGGCCCAGGACTGAGTCTGGGGTCAGCTTTCACGGTCGCTTTTCCCTTCCTCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
3UTR-3UTR GCA 90 bp GCAGACCCTCCCACTCCTGCTGGGGTCTTTGTAGAAGAGAAGGGTCTGGCGGCAGAGGCTTTGGGTTTTTaGAGTTTCCATCTACCCAGG +
Preference number: 2 (lower is better)
Translates to: ADPPTPAGVFVEEKGLAAEALGF*SFHLPR
Trigger: CCTGGGTAGATGGAAACTGCAAAAACCCAAAGCCTC...TGCCGCCAGACCCTTCTCTTCTACAAAGACCCCAGCAGGAGTGGGAGGGTCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000615025.4
ENST00000646520.1
ENST00000651849.1
3UTR-3UTR GCA 90 bp GTGAGGAAGGGAAAAGCGACCGTGAAAGCTGACCCCAGACTCAGTCCTGGGCCCCAAAGAGACCTGAGGTaGCTTGGGTCTGAGATACTT +
Preference number: 2 (lower is better)
Translates to: VRKGKATVKADPRLSPGPQRDLR*LGSEIL
Trigger: AAGTATCTCAGACCCAAGGCACCTCAGGTCTCTTTG...GGGCCCAGGACTGAGTCTGGGGTCAGCTTTCACGGTCGCTTTTCCCTTCCTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
3UTR-3UTR GCA 90 bp CTGGACAGCTGGTGGCAGCACGGGACTGAACCTGCTGGGGTCTGCGTCGCTGCGAATCTTTGGACAGTATaGATGTGTGTCTACAAACAC +
Preference number: 2 (lower is better)
Translates to: LDSWWQHGTEPAGVCVAANLWTV*MCVYKH
Trigger: GTGTTTGTAGACACACATGCATACTGTCCAAAGATT...CGCAGCGACGCAGACCCCAGCAGGTTCAGTCCCGTGCTGCCACCAGCTGTCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
3UTR-3UTR GCA 90 bp GTACAGGAGTGGGGACGCGTCAGTGTACAATACATTCATGTCCAGGATAAGGAGTGGAGGGGCTGGCCATaGATGCAAGGTGGGCTGTGG +
Preference number: 2 (lower is better)
Translates to: VQEWGRVSVQYIHVQDKEWRGWP*MQGGLW
Trigger: CCACAGCCCACCTTGCATGCATGGCCAGCCCCTCCA...CTCCTTATCCTGGACATGAATGTATTGTACACTGACGCGTCCCCACTCCTGTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
3UTR-3UTR GCA 90 bp CACATGCGCACACACGTCCTGTGTTACCACTGGCCAAGGAAACGCGAGTCTCAGGCAGGATTGGGTGTCTaGCTTGACTCACAGGATCTC +
Preference number: 2 (lower is better)
Translates to: HMRTHVLCYHWPRKRESQAGLGV*LDSQDL
Trigger: GAGATCCTGTGAGTCAAGGCAGACACCCAATCCTGC...CTGAGACTCGCGTTTCCTTGGCCAGTGGTAACACAGGACGTGTGTGCGCATGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
3UTR-3UTR CCA 90 bp CCCAACTGTCCAGTGGACCTTAGGCCCTTTGGCCCAAGTGCAAGCCTTCTGCCCGGTGTTAGGTGGACCTaGTTAGTTTTGGAGGCTTTG +
Preference number: 2 (lower is better)
Translates to: PNCPVDLRPFGPSASLLPGVRWT*LVLEAL
Trigger: CAAAGCCTCCAAAACTAACCAGGTCCACCTAACACC...GGGCAGAAGGCTTGCACTTGGGCCAAAGGGCCTAAGGTCCACTGGACAGTTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000646520.1
ENST00000651849.1
3UTR-3UTR CCA 90 bp CGCAGGGATGCTGGGAGGGAGTTACCAGCTTTCTGGCATGAATGGGTCCTCCCGGGTGTTAGGTGGACCTaGTTAGTTTTGGAGGCTTTG +
Preference number: 2 (lower is better)
Translates to: RRDAGRELPAFWHEWVLPGVRWT*LVLEAL
Trigger: CAAAGCCTCCAAAACTAACCAGGTCCACCTAACACC...CGGGAGGACCCATTCATGCCAGAAAGCTGGTAACTCCCTCCCAGCATCCCTGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
3UTR-3UTR CCA 90 bp ACAGGGCGATGCCATTGCAGACCCTCCCACTCCTGCTGGGGTCTTTGTAGAAGACTGTCACCCATAGCTTaGTTGTTTGTCCCTCCCCTG +
Preference number: 2 (lower is better)
Translates to: TGRCHCRPSHSCWGLCRRLSPIA*LFVPPL
Trigger: CAGGGGAGGGACAAACAACCAAGCTATGGGTGACAG...TCTTCTACAAAGACCCCAGCAGGAGTGGGAGGGTCTGCAATGGCATCGCCCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000615025.4
ENST00000646520.1
ENST00000651849.1
3UTR-3UTR CCA 90 bp CGATGCCATTGCAGACCCTCCCACTCCTGCTGGGGTCTTTGTAGAAGAGAAGGGCTGTCACCCATAGCTTaGTTGTTTGTCCCTCCCCTG +
Preference number: 2 (lower is better)
Translates to: RCHCRPSHSCWGLCRREGLSPIA*LFVPPL
Trigger: CAGGGGAGGGACAAACAACCAAGCTATGGGTGACAG...CCCTTCTCTTCTACAAAGACCCCAGCAGGAGTGGGAGGGTCTGCAATGGCATCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000615025.4
ENST00000646520.1
ENST00000651849.1
3UTR-3UTR CCA 90 bp TTCCTTCGCAGGTCCCCTCTCCATTGTTTTCTCGCCCAATCCTTCCCTCTTGCTCACAAGGTTTCACTCTaGGAAGCAGGGGGTGGCCAG +
Preference number: 2 (lower is better)
Translates to: FLRRSPLHCFLAQSFPLAHKVSL*EAGGGQ
Trigger: CTGGCCACCCCCTGCTTCCCAGAGTGAAACCTTGTG...AGCAAGAGGGAAGGATTGGGCGAGAAAACAATGGAGAGGGGACCTGCGAAGGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
3UTR-3UTR TCA 90 bp CCAGAACACCGTGATAGCAGGCTGATCAAACCGCTCACTTCCTCCCTGTTTTCCTCGCTGCGATGTCCATaGCTCCCTGGCTCTTTGTTG +
Preference number: 2 (lower is better)
Translates to: PEHRDSRLIKPLTSSLFSSLRCP*LPGSLL
Trigger: CAACAAAGAGCCAGGGAGTCATGGACATCGCAGCGA...GGAAAACAGGGAGGAAGTGAGCGGTTTGATCAGCCTGCTATCACGGTGTTCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
3UTR-3UTR GCA 90 bp TTCCTTCGCAGGTCCCCTCTCCATTGTTTTCTCGCCCAATCCTTCCCTCTTGCTTTTCCCCCTCCCCTCTaGAATTCACTTCCCTCTCCC +
Preference number: 2 (lower is better)
Translates to: FLRRSPLHCFLAQSFPLAFPPPL*NSLPSP
Trigger: GGGAGAGGGAAGTGAATTGCAGAGGGGAGGGGGAAA...AGCAAGAGGGAAGGATTGGGCGAGAAAACAATGGAGAGGGGACCTGCGAAGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
3UTR-3UTR GCA 90 bp GTAGAAGAGAAGGGTCTGGCGGCACCCAGGGTCACTAGAGTGCAGGTGCAGGCAAGCTTGATTTCCCCTTaGAAAGCAGTTGAGTTAGGG +
Preference number: 2 (lower is better)
Translates to: VEEKGLAAPRVTRVQVQASLISP*KAVELG
Trigger: CCCTAACTCAACTGCTTTGCAAGGGGAAATCAAGCT...TGCCTGCACCTGCACTCTAGTGACCCTGGGTGCCGCCAGACCCTTCTCTTCTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000615025.4
ENST00000646520.1
ENST00000651849.1
3UTR-3UTR CCA 90 bp CGATGCCATTGCAGACCCTCCCACTCCTGCTGGGGTCTTTGTAGAAGAGAAGGGTTCTGGGTTCAAGAGTaGTCAGGATTCATGGGTCCC +
Preference number: 2 (lower is better)
Translates to: RCHCRPSHSCWGLCRREGFWVQE*SGFMGP
Trigger: GGGACCCATGAATCCTGACCACTCTTGAACCCAGAA...CCCTTCTCTTCTACAAAGACCCCAGCAGGAGTGGGAGGGTCTGCAATGGCATCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000615025.4
ENST00000646520.1
ENST00000651849.1
3UTR-3UTR CCA 90 bp ATGTCCCACGGTGGCTCTGTTTGGTTTGACAACCTACCCCACAGGTGGCCAGAAGGAGGGGGTGTTAGGTaGACCTGGTTAGTTTTGGAG +
Preference number: 2 (lower is better)
Translates to: MSHGGSVWFDNLPHRWPEGGGVR*TWLVLE
Trigger: CTCCAAAACTAACCAGGTCCACCTAACACCCCCTCC...TTCTGGCCACCTGTGGGGTAGGTTGTCAAACCAAACAGAGCCACCGTGGGACAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000615025.4
ENST00000646520.1
ENST00000651849.1
3UTR-3UTR CCA 90 bp ACAGGGCGATGCCATTGCAGACCCTCCCACTCCTGCTGGGGTCTTTGTAGAAGAAACCTACCCCACAGGTaGCCAGAAAAAGATTCTCCC +
Preference number: 2 (lower is better)
Translates to: TGRCHCRPSHSCWGLCRRNLPHR*PEKDSP
Trigger: GGGAGAATCTTTTTCTGGCCACCTGTGGGGTAGGTT...TCTTCTACAAAGACCCCAGCAGGAGTGGGAGGGTCTGCAATGGCATCGCCCTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000615025.4
ENST00000646520.1
ENST00000651849.1
3UTR-3UTR CCA 90 bp GGGCGATGCCATTGCAGACCCTCCCACTCCTGCTGGGGTCTTTGTAGAAGAGAAAACCTACCCCACAGGTaGCCAGAAAAAGATTCTCCC +
Preference number: 2 (lower is better)
Translates to: GRCHCRPSHSCWGLCRRENLPHR*PEKDSP
Trigger: GGGAGAATCTTTTTCTGGCCACCTGTGGGGTAGGTT...TTCTCTTCTACAAAGACCCCAGCAGGAGTGGGAGGGTCTGCAATGGCATCGCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000615025.4
ENST00000646520.1
ENST00000651849.1
3UTR-3UTR CCA 90 bp TCTCCTGGCCAGTCTCAGAAGACCCAGGGATCCTCAAAAACCAGGGGAGAAGGACACGGTGGCTCTGTTTaGTTTGACAACCTACCCCAC +
Preference number: 2 (lower is better)
Translates to: SPGQSQKTQGSSKTRGEGHGGSV*FDNLPH
Trigger: GTGGGGTAGGTTGTCAAACCAAACAGAGCCACCGTG...TCCTTCTCCCCTGGTTTTTGAGGATCCCTGGGTCTTCTGAGACTGGCCAGGAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
3UTR-3UTR CCA 90 bp TCTCCTGGCCAGTCTCAGAAGACCCAGGGATCCTCAAAAACCAGGGGAGAAGGAAGGGCAAGGAGACCCTaGCTGCTTCAAGAACAAAGG +
Preference number: 2 (lower is better)
Translates to: SPGQSQKTQGSSKTRGEGRARRP*LLQEQR
Trigger: CCTTTGTTCTTGAAGCAGCCAGGGTCTCCTTGCCCT...TCCTTCTCCCCTGGTTTTTGAGGATCCCTGGGTCTTCTGAGACTGGCCAGGAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
3UTR-3UTR CCA 90 bp CGCAGGGATGCTGGGAGGGAGTTACCAGCTTTCTGGCATGAATGGGTCCTCCCGTCCTGGGCTCTCCAGTaGGAGATGAGATATTTACAA +
Preference number: 2 (lower is better)
Translates to: RRDAGRELPAFWHEWVLPSWALQ*EMRYLQ
Trigger: TTGTAAATATCTCATCTCCCACTGGAGAGCCCAGGA...CGGGAGGACCCATTCATGCCAGAAAGCTGGTAACTCCCTCCCAGCATCCCTGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
3UTR-3UTR CCA 90 bp ATGTCCAGGATAAGGAGCATACACCAGGATTTATACACGGTGGCAGCGGCTATATCCAGGGCCTGGACCTaGGGTAAAGGGCTGCTCTGG +
Preference number: 2 (lower is better)
Translates to: MSRIRSIHQDLYTVAAAISRAWT*GKGLLW
Trigger: CCAGAGCAGCCCTTTACCCCAGGTCCAGGCCCTGGA...TATAGCCGCTGCCACCGTGTATAAATCCTGGTGTATGCTCCTTATCCTGGACAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
3UTR-3UTR TCA 90 bp CCAGAACACCGTGATAGCAGGCTGATCAAACCGCTCACTTCCTCCCTGTTTTCCTGGCTCTGTTTGGTTTaGCAACCTACCCCACAGGTG +
Preference number: 2 (lower is better)
Translates to: PEHRDSRLIKPLTSSLFSWLCLV*QPTPQV
Trigger: CACCTGTGGGGTAGGTTGTCAAACCAAACAGAGCCA...GGAAAACAGGGAGGAAGTGAGCGGTTTGATCAGCCTGCTATCACGGTGTTCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
3UTR-3UTR TCA 90 bp CCAGAACACCGTGATAGCAGGCTGATCAAACCGCTCACTTCCTCCCTGTTTTCCACAAGTTCTTCCACTTaGTGTCCCACGGTGGCTCTG +
Preference number: 2 (lower is better)
Translates to: PEHRDSRLIKPLTSSLFSTSSST*CPTVAL
Trigger: CAGAGCCACCGTGGGACATCAAGTGGAAGAACTTGT...GGAAAACAGGGAGGAAGTGAGCGGTTTGATCAGCCTGCTATCACGGTGTTCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
3UTR-3UTR TCA 90 bp GGGCGATGCCATTGCAGACCCTCCCACTCCTGCTGGGGTCTTTGTAGAAGAGAAGAGGTGCCTTGGGTCTaGGATACTTTCAAGCAAACA +
Preference number: 2 (lower is better)
Translates to: GRCHCRPSHSCWGLCRREEVPWV*DTFKQT
Trigger: TGTTTGCTTGAAAGTATCTCAGACCCAAGGCACCTC...TTCTCTTCTACAAAGACCCCAGCAGGAGTGGGAGGGTCTGCAATGGCATCGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000615025.4
ENST00000646520.1
ENST00000651849.1
3UTR-3UTR TCA 90 bp ATGTCCAGGATAAGGAGCATACACCAGGATTTATACACGGTGGCAGCGGCTATAGGGCCCCTGGCTTGCTaGAAAGTAAGGGGGCCAAAG +
Preference number: 2 (lower is better)
Translates to: MSRIRSIHQDLYTVAAAIGPLAC*KVRGPK
Trigger: CTTTGGCCCCCTTACTTTTCAGCAAGCCAGGGGCCC...TATAGCCGCTGCCACCGTGTATAAATCCTGGTGTATGCTCCTTATCCTGGACAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
3UTR-3UTR GCA 90 bp GGCTTCTGGCCAAGGCAGGACAGGGCGATGCCATTGCAGACCCTCCCACTCCTGAATCTTTGGACAGTATaGATGTGTGTCTACAAACAC +
Preference number: 2 (lower is better)
Translates to: GFWPRQDRAMPLQTLPLLNLWTV*MCVYKH
Trigger: GTGTTTGTAGACACACATGCATACTGTCCAAAGATT...CAGGAGTGGGAGGGTCTGCAATGGCATCGCCCTGTCCTGCCTTGGCCAGAAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000615025.4
ENST00000646520.1
ENST00000651849.1
3UTR-3UTR GCA 90 bp ACCCTCCTTTCCAACTCCCTGAAACAGAACGTCCACACTGACACAGCTCCTTGGAGACCCTCCCACTCCTaGTGGGGTCTTTGTAGAAGA +
Preference number: 2 (lower is better)
Translates to: TLLSNSLKQNVHTDTAPWRPSHS*WGLCRR
Trigger: TCTTCTACAAAGACCCCAGCAGGAGTGGGAGGGTCT...CCAAGGAGCTGTGTCAGTGTGGACGTTCTGTTTCAGGGAGTTGGAAAGGAGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
3UTR-3UTR GCA 90 bp GAAATCTTTGGCAAGAATATACTGCAGTGCGGAGTGTTGTGTGTGCGTAGGTGTTGGAGGGGCTGGCCATaGATGCAAGGTGGGCTGTGG +
Preference number: 2 (lower is better)
Translates to: EIFGKNILQCGVLCVRRCWRGWP*MQGGLW
Trigger: CCACAGCCCACCTTGCATGCATGGCCAGCCCCTCCA...ACACCTACGCACACACAACACTCCGCACTGCAGTATATTCTTGCCAAAGATTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
3UTR-3UTR CCA 90 bp GTACAGGAGTGGGGACGCGTCAGTGTACAATACATTCATGTCCAGGATAAGGAGAGTGGTCAGGATTCATaGGTCCCCTCCCCACAAGCC +
Preference number: 2 (lower is better)
Translates to: VQEWGRVSVQYIHVQDKESGQDS*VPSPQA
Trigger: GGCTTGTGGGGAGGGGACCCATGAATCCTGACCACT...CTCCTTATCCTGGACATGAATGTATTGTACACTGACGCGTCCCCACTCCTGTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
3UTR-3UTR CCA 90 bp CCTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTaGTCAGGATTCATGGGTCCC +
Preference number: 2 (lower is better)
Translates to: PLPTLHFLLSSEIGPKSSFWVQE*SGFMGP
Trigger: GGGACCCATGAATCCTGACCACTCTTGAACCCAGAA...GGAGGACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000615025.4
ENST00000646520.1
ENST00000651849.1
3UTR-3UTR CCA 90 bp ATGTCCCACGGTGGCTCTGTTTGGTTTGACAACCTACCCCACAGGTGGCCAGAATTCTGGGTTCAAGAGTaGTCAGGATTCATGGGTCCC +
Preference number: 2 (lower is better)
Translates to: MSHGGSVWFDNLPHRWPEFWVQE*SGFMGP
Trigger: GGGACCCATGAATCCTGACCACTCTTGAACCCAGAA...TTCTGGCCACCTGTGGGGTAGGTTGTCAAACCAAACAGAGCCACCGTGGGACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000615025.4
ENST00000646520.1
ENST00000651849.1
3UTR-3UTR CCA 90 bp GGGGAAGACACCCCGAGCTCAACAGCTGCCTGTTCTGACAGATCTCTTCCTATGTCTCTCCTCCGAAATTaGCCCAAAGTCCTCCTTCTG +
Preference number: 2 (lower is better)
Translates to: GEDTPSSTAACSDRSLPMSLLRN*PKVLLL
Trigger: CAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGAGA...CATAGGAAGAGATCTGTCAGAACAGGCAGCTGTTGAGCTCGGGGTGTCTTCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000615025.4
ENST00000646520.1
ENST00000651849.1
3UTR-3UTR CCA 90 bp CCCAACTGTCCAGTGGACCTTAGGCCCTTTGGCCCAAGTGCAAGCCTTCTGCCCACCAACCCTAATCTTTaGACAGTATGCATGTGTGTC +
Preference number: 2 (lower is better)
Translates to: PNCPVDLRPFGPSASLLPTNPNL*TVCMCV
Trigger: GACACACATGCATACTGTCCAAAGATTAGGGTTGGT...GGGCAGAAGGCTTGCACTTGGGCCAAAGGGCCTAAGGTCCACTGGACAGTTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000646520.1
ENST00000651849.1
3UTR-3UTR CCA 90 bp TTCCTTCGCAGGTCCCCTCTCCATTGTTTTCTCGCCCAATCCTTCCCTCTTGCTAGGGCAAGGAGACCCTaGCTGCTTCAAGAACAAAGG +
Preference number: 2 (lower is better)
Translates to: FLRRSPLHCFLAQSFPLARARRP*LLQEQR
Trigger: CCTTTGTTCTTGAAGCAGCCAGGGTCTCCTTGCCCT...AGCAAGAGGGAAGGATTGGGCGAGAAAACAATGGAGAGGGGACCTGCGAAGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
3UTR-3UTR TCA 90 bp TTCCTTCGCAGGTCCCCTCTCCATTGTTTTCTCGCCCAATCCTTCCCTCTTGCTTCCTTTCCAACTCCCTaGAACAGAACGTCCACACTG +
Preference number: 2 (lower is better)
Translates to: FLRRSPLHCFLAQSFPLASFPTP*NRTSTL
Trigger: CAGTGTGGACGTTCTGTTTCAGGGAGTTGGAAAGGA...AGCAAGAGGGAAGGATTGGGCGAGAAAACAATGGAGAGGGGACCTGCGAAGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
3UTR-3UTR TCA 90 bp ATGTCCAGGATAAGGAGCATACACCAGGATTTATACACGGTGGCAGCGGCTATAGGGTTTGCTAGGGAATaGGGAGAGGGGGAAACCCAG +
Preference number: 2 (lower is better)
Translates to: MSRIRSIHQDLYTVAAAIGFARE*GEGETQ
Trigger: CTGGGTTTCCCCCTCTCCTCATTCCCTAGCAAACCC...TATAGCCGCTGCCACCGTGTATAAATCCTGGTGTATGCTCCTTATCCTGGACAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
3UTR-3UTR TCA 90 bp CACAGGGCAGAGTCCAGGAGCCAGAACACTTCCTTGGCTTGGAAAAGGAAAAAGGGTGAACACAGGACCTaGATAGAAGGACTGGGGTGT +
Preference number: 2 (lower is better)
Translates to: HRAESRSQNTSLAWKRKKGEHRT*IEGLGC
Trigger: ACACCCCAGTCCTTCTATTCAGGTCCTGTGTTCACC...CTTTTTCCTTTTCCAAGCCAAGGAAGTGTTCTGGCTCCTGGACTCTGCCCTGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000310858.10
3UTR-3UTR GCA 90 bp GGGGAAGACACCCCGAGCTCAACAGCTGCCTGTTCTGACAGATCTCTTCCTATGGAGGCTTTGGGTTTTTaGAGTTTCCATCTACCCAGG +
Preference number: 2 (lower is better)
Translates to: GEDTPSSTAACSDRSLPMEALGF*SFHLPR
Trigger: CCTGGGTAGATGGAAACTGCAAAAACCCAAAGCCTC...CATAGGAAGAGATCTGTCAGAACAGGCAGCTGTTGAGCTCGGGGTGTCTTCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000615025.4
ENST00000646520.1
ENST00000651849.1
3UTR-3UTR GCA 90 bp CACATGCGCACACACGTCCTGTGTTACCACTGGCCAAGGAAACGCGAGTCTCAGTTGGCAAGAATATACTaGAGTGCGGAGTGTTGTGTG +
Preference number: 2 (lower is better)
Translates to: HMRTHVLCYHWPRKRESQLARIY*SAECCV
Trigger: CACACAACACTCCGCACTGCAGTATATTCTTGCCAA...CTGAGACTCGCGTTTCCTTGGCCAGTGGTAACACAGGACGTGTGTGCGCATGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
3UTR-3UTR CCA 90 bp CCAGAACACCGTGATAGCAGGCTGATCAAACCGCTCACTTCCTCCCTGTTTTCCAACCTACCCCACAGGTaGCCAGAAAAAGATTCTCCC +
Preference number: 2 (lower is better)
Translates to: PEHRDSRLIKPLTSSLFSNLPHR*PEKDSP
Trigger: GGGAGAATCTTTTTCTGGCCACCTGTGGGGTAGGTT...GGAAAACAGGGAGGAAGTGAGCGGTTTGATCAGCCTGCTATCACGGTGTTCTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
3UTR-3UTR CCA 90 bp GTGAGGAAGGGAAAAGCGACCGTGAAAGCTGACCCCAGACTCAGTCCTGGGCCCAAAAAGGATAGGAATTaGTTTATCCCCAAGGAAGGC +
Preference number: 2 (lower is better)
Translates to: VRKGKATVKADPRLSPGPKKDRN*FIPKEG
Trigger: GCCTTCCTTGGGGATAAACCAATTCCTATCCTTTTT...GGGCCCAGGACTGAGTCTGGGGTCAGCTTTCACGGTCGCTTTTCCCTTCCTCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
3UTR-3UTR CCA 90 bp ATGCGCACACACGTCCTGTGTTACCACTGGCCAAGGAAACGCGAGTCTCAGGATACTTTGGAGGGACTTTaGTCACCAGGCACAAGGTTT +
Preference number: 2 (lower is better)
Translates to: MRTHVLCYHWPRKRESQDTLEGL*SPGTRF
Trigger: AAACCTTGTGCCTGGTGACCAAAGTCCCTCCAAAGT...ATCCTGAGACTCGCGTTTCCTTGGCCAGTGGTAACACAGGACGTGTGTGCGCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
3UTR CAA 90 bp TTCACTTCCCTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATaGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCA +
Preference number: 2 (lower is better)
Translates to: FTSLSPRCTFFSPPK*AQSPPSGFKSGQDS
Trigger: TGAATCCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGGGAAGTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000615025.4
ENST00000646520.1
ENST00000651849.1
3UTR-3UTR GCA 90 bp CCAGAACACCGTGATAGCAGGCTGATCAAACCGCTCACTTCCTCCCTGTTTTCCCAAAGAGACCTGAGGTaGCTTGGGTCTGAGATACTT +
Preference number: 2 (lower is better)
Translates to: PEHRDSRLIKPLTSSLFSQRDLR*LGSEIL
Trigger: AAGTATCTCAGACCCAAGGCACCTCAGGTCTCTTTG...GGAAAACAGGGAGGAAGTGAGCGGTTTGATCAGCCTGCTATCACGGTGTTCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
3UTR-3UTR GCA 90 bp GTACAGGAGTGGGGACGCGTCAGTGTACAATACATTCATGTCCAGGATAAGGAGACACGCACCTATGTGTaGCATACACACCCATGTCCC +
Preference number: 2 (lower is better)
Translates to: VQEWGRVSVQYIHVQDKETRTYV*HTHPCP
Trigger: GGGACATGGGTGTGTATGGCACACATAGGTGCGTGT...CTCCTTATCCTGGACATGAATGTATTGTACACTGACGCGTCCCCACTCCTGTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
3UTR-3UTR GCA 90 bp ATGTCCAGGATAAGGAGCATACACCAGGATTTATACACGGTGGCAGCGGCTATATGGGGTGGGGAAGGATaGTGGGTGATCTTGTTTCCC +
Preference number: 2 (lower is better)
Translates to: MSRIRSIHQDLYTVAAAIWGGEG*WVILFP
Trigger: GGGAAACAAGATCACCCAGCATCCTTCCCCACCCCA...TATAGCCGCTGCCACCGTGTATAAATCCTGGTGTATGCTCCTTATCCTGGACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
3UTR-3UTR CCA 90 bp TTGATTTCCCCTTGCAAAGCAGTTGAGTTAGGGAGACAGAGCTTTTCCATTCCCAGTGGTCAGGATTCATaGGTCCCCTCCCCACAAGCC +
Preference number: 2 (lower is better)
Translates to: LISPCKAVELGRQSFSIPSGQDS*VPSPQA
Trigger: GGCTTGTGGGGAGGGGACCCATGAATCCTGACCACT...GGGAATGGAAAAGCTCTGTCTCCCTAACTCAACTGCTTTGCAAGGGGAAATCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000615025.4
ENST00000646520.1
ENST00000651849.1
3UTR-3UTR CCA 90 bp TTGGGTTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTCTCCTCCATAGTGGTCAGGATTCATaGGTCCCCTCCCCACAAGCC +
Preference number: 2 (lower is better)
Translates to: LGFCSFHLPRGIQVLLLHSGQDS*VPSPQA
Trigger: GGCTTGTGGGGAGGGGACCCATGAATCCTGACCACT...ATGGAGGAGAAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAACCCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000615025.4
ENST00000646520.1
ENST00000651849.1
3UTR-3UTR CCA 90 bp CGATGCCATTGCAGACCCTCCCACTCCTGCTGGGGTCTTTGTAGAAGAGAAGGGACCAACCCTAATCTTTaGACAGTATGCATGTGTGTC +
Preference number: 2 (lower is better)
Translates to: RCHCRPSHSCWGLCRREGTNPNL*TVCMCV
Trigger: GACACACATGCATACTGTCCAAAGATTAGGGTTGGT...CCCTTCTCTTCTACAAAGACCCCAGCAGGAGTGGGAGGGTCTGCAATGGCATCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000615025.4
ENST00000646520.1
ENST00000651849.1
3UTR-3UTR CCA 90 bp GGGCGATGCCATTGCAGACCCTCCCACTCCTGCTGGGGTCTTTGTAGAAGAGAAACCAACCCTAATCTTTaGACAGTATGCATGTGTGTC +
Preference number: 2 (lower is better)
Translates to: GRCHCRPSHSCWGLCRRETNPNL*TVCMCV
Trigger: GACACACATGCATACTGTCCAAAGATTAGGGTTGGT...TTCTCTTCTACAAAGACCCCAGCAGGAGTGGGAGGGTCTGCAATGGCATCGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000615025.4
ENST00000646520.1
ENST00000651849.1
3UTR-3UTR CCA 90 bp GCTATCGCTGAGACTCCACCAATTGGTTGGCCTACAGGCCTCACCTCCCGACTCAAAAAGGATAGGAATTaGTTTATCCCCAAGGAAGGC +
Preference number: 2 (lower is better)
Translates to: AIAETPPIGWPTGLTSRLKKDRN*FIPKEG
Trigger: GCCTTCCTTGGGGATAAACCAATTCCTATCCTTTTT...GAGTCGGGAGGTGAGGCCTGTAGGCCAACCAATTGGTGGAGTCTCAGCGATAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
3UTR-3UTR GCA 90 bp TCTAGATCAATGTGTGAGGATGTGGGTGCAGACACACACCCACACGACAATATATCCCTCTCCCCACGTTaGACTTTCTTCTCTCCTCCG +
Preference number: 2 (lower is better)
Translates to: SRSMCEDVGADTHPHDNISLSPR*TFFSPP
Trigger: CGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGGGA...TATATTGTCGTGTGGGTGTGTGTCTGCACCCACATCCTCACACATTGATCTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000615025.4
ENST00000646520.1
ENST00000651849.1
3UTR-3UTR GCA 90 bp CCAGAACACCGTGATAGCAGGCTGATCAAACCGCTCACTTCCTCCCTGTTTTCCAGCTTGATTTCCCCTTaGAAAGCAGTTGAGTTAGGG +
Preference number: 2 (lower is better)
Translates to: PEHRDSRLIKPLTSSLFSSLISP*KAVELG
Trigger: CCCTAACTCAACTGCTTTGCAAGGGGAAATCAAGCT...GGAAAACAGGGAGGAAGTGAGCGGTTTGATCAGCCTGCTATCACGGTGTTCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
3UTR-3UTR GCA 90 bp GAAATCTTTGGCAAGAATATACTGCAGTGCGGAGTGTTGTGTGTGCGTAGGTGTCAAGGAGACCCTGGCTaGTTCAAGAACAAAGGCCCC +
Preference number: 2 (lower is better)
Translates to: EIFGKNILQCGVLCVRRCQGDPG*FKNKGP
Trigger: GGGGCCTTTGTTCTTGAAGCAGCCAGGGTCTCCTTG...ACACCTACGCACACACAACACTCCGCACTGCAGTATATTCTTGCCAAAGATTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
3UTR-3UTR GCA 90 bp GTACAGGAGTGGGGACGCGTCAGTGTACAATACATTCATGTCCAGGATAAGGAGAATTTGAAGTTCCATTaGCCAGCACCTCCAACCCCG +
Preference number: 2 (lower is better)
Translates to: VQEWGRVSVQYIHVQDKENLKFH*PAPPTP
Trigger: CGGGGTTGGAGGTGCTGGGCAATGGAACTTCAAATT...CTCCTTATCCTGGACATGAATGTATTGTACACTGACGCGTCCCCACTCCTGTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
3UTR-3UTR CCA 90 bp CCCAGCTTGATTTCCCCTTGCAAAGCAGTTGAGTTAGGGAGACAGAGCTTTTCCCCAAAGTCCTCCTTCTaGGTTCAAGAGTGGTCAGGA +
Preference number: 2 (lower is better)
Translates to: PSLISPCKAVELGRQSFSPKSSF*VQEWSG
Trigger: TCCTGACCACTCTTGAACCCAGAAGGAGGACTTTGG...GGAAAAGCTCTGTCTCCCTAACTCAACTGCTTTGCAAGGGGAAATCAAGCTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000615025.4
ENST00000646520.1
ENST00000651849.1
3UTR-3UTR CCA 90 bp CCCAGCTTGATTTCCCCTTGCAAAGCAGTTGAGTTAGGGAGACAGAGCTTTTCCTCTCTCCTCCGAAATTaGCCCAAAGTCCTCCTTCTG +
Preference number: 2 (lower is better)
Translates to: PSLISPCKAVELGRQSFSSLLRN*PKVLLL
Trigger: CAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGAGA...GGAAAAGCTCTGTCTCCCTAACTCAACTGCTTTGCAAGGGGAAATCAAGCTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000615025.4
ENST00000646520.1
ENST00000651849.1
3UTR-3UTR CCA 90 bp GATCTAGATCAATGTGTGAGGATGTGGGTGCAGACACACACCCACACGACAATAGGAGGGGGTGTTAGGTaGACCTGGTTAGTTTTGGAG +
Preference number: 2 (lower is better)
Translates to: DLDQCVRMWVQTHTHTTIGGGVR*TWLVLE
Trigger: CTCCAAAACTAACCAGGTCCACCTAACACCCCCTCC...TATTGTCGTGTGGGTGTGTGTCTGCACCCACATCCTCACACATTGATCTAGATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000615025.4
ENST00000646520.1
ENST00000651849.1
3UTR-3UTR CCA 90 bp ATGTCCAGGATAAGGAGCATACACCAGGATTTATACACGGTGGCAGCGGCTATAGGAGGGGGTGTTAGGTaGACCTGGTTAGTTTTGGAG +
Preference number: 2 (lower is better)
Translates to: MSRIRSIHQDLYTVAAAIGGGVR*TWLVLE
Trigger: CTCCAAAACTAACCAGGTCCACCTAACACCCCCTCC...TATAGCCGCTGCCACCGTGTATAAATCCTGGTGTATGCTCCTTATCCTGGACAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
3UTR-3UTR CCA 90 bp CCATTCTGGCTTAGAGTCCTTAAATGGTGGTCAGGTGTTTTCCCAACTGTCCAGCACGGTGGCTCTGTTTaGTTTGACAACCTACCCCAC +
Preference number: 2 (lower is better)
Translates to: PFWLRVLKWWSGVFPTVQHGGSV*FDNLPH
Trigger: GTGGGGTAGGTTGTCAAACCAAACAGAGCCACCGTG...CTGGACAGTTGGGAAAACACCTGACCACCATTTAAGGACTCTAAGCCAGAATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000646520.1
ENST00000651849.1
3UTR-3UTR CCA 90 bp TCTTCTCCCAGACCCTTTCCCATCCCAGCCCATGTTCAAGGCCAGACAGCGCTCGTGAATTTTCCATTCTaGCTTAGAGTCCTTAAATGG +
Preference number: 2 (lower is better)
Translates to: SSPRPFPIPAHVQGQTALVNFPF*LRVLKW
Trigger: CCATTTAAGGACTCTAAGCCAGAATGGAAAATTCAC...GAGCGCTGTCTGGCCTTGAACATGGGCTGGGATGGGAAAGGGTCTGGGAGAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
3UTR-3UTR TCA 90 bp TTCCTTCGCAGGTCCCCTCTCCATTGTTTTCTCGCCCAATCCTTCCCTCTTGCTAGAATGGAGTCCTGGTaGATTTTCCATTCTGGCTTA +
Preference number: 2 (lower is better)
Translates to: FLRRSPLHCFLAQSFPLARMESW*IFHSGL
Trigger: TAAGCCAGAATGGAAAATTCACCAGGACTCCATTCT...AGCAAGAGGGAAGGATTGGGCGAGAAAACAATGGAGAGGGGACCTGCGAAGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
3UTR-3UTR GCA 90 bp GTTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTCTCCTCCATCTTTTCCCTCTCCCCACGTTaGACTTTCTTCTCTCCTCCG +
Preference number: 2 (lower is better)
Translates to: VFAVSIYPGESKFFSSIFSLSPR*TFFSPP
Trigger: CGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGGGA...AAAGATGGAGGAGAAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000615025.4
ENST00000646520.1
ENST00000651849.1
3UTR-3UTR GCA 90 bp GTTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTCTCCTCCATCTTTTTTCCCCCTCCCCTCTaGAATTCACTTCCCTCTCCC +
Preference number: 2 (lower is better)
Translates to: VFAVSIYPGESKFFSSIFFPPPL*NSLPSP
Trigger: GGGAGAGGGAAGTGAATTGCAGAGGGGAGGGGGAAA...AAAGATGGAGGAGAAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAAC
49% GC, longest homopolymer 6 nt, total homopolymer stretches 24 nt.
Matches the following 8 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000615025.4
ENST00000646520.1
ENST00000651849.1
3UTR-3UTR CCA 90 bp TCTGCAATTCACTTCCCTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATTCCAAAGTCCTCCTTCTaGGTTCAAGAGTGGTCAGGA +
Preference number: 2 (lower is better)
Translates to: SAIHFPLPTLHFLLSSEIPKSSF*VQEWSG
Trigger: TCCTGACCACTCTTGAACCCAGAAGGAGGACTTTGG...AATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGGGAAGTGAATTGCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000615025.4
ENST00000646520.1
ENST00000651849.1
3UTR-3UTR CCA 90 bp GATCTAGATCAATGTGTGAGGATGTGGGTGCAGACACACACCCACACGACAATAAACCTACCCCACAGGTaGCCAGAAAAAGATTCTCCC +
Preference number: 2 (lower is better)
Translates to: DLDQCVRMWVQTHTHTTINLPHR*PEKDSP
Trigger: GGGAGAATCTTTTTCTGGCCACCTGTGGGGTAGGTT...TATTGTCGTGTGGGTGTGTGTCTGCACCCACATCCTCACACATTGATCTAGATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000615025.4
ENST00000646520.1
ENST00000651849.1
3UTR-3UTR CCA 90 bp TTCCTTCGCAGGTCCCCTCTCCATTGTTTTCTCGCCCAATCCTTCCCTCTTGCTCTTAGAGTCCTTAAATaGTGGTCAGGTGTTTTCCCA +
Preference number: 2 (lower is better)
Translates to: FLRRSPLHCFLAQSFPLALRVLK*WSGVFP
Trigger: TGGGAAAACACCTGACCACCATTTAAGGACTCTAAG...AGCAAGAGGGAAGGATTGGGCGAGAAAACAATGGAGAGGGGACCTGCGAAGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
3UTR-3UTR CCA 90 bp GTACAGGAGTGGGGACGCGTCAGTGTACAATACATTCATGTCCAGGATAAGGAGTGTCCCTTAAGCGCCTaGCTAAATAAGAGAGCCAGA +
Preference number: 2 (lower is better)
Translates to: VQEWGRVSVQYIHVQDKECPLSA*LNKRAR
Trigger: TCTGGCTCTCTTATTTAGCCAGGCGCTTAAGGGACA...CTCCTTATCCTGGACATGAATGTATTGTACACTGACGCGTCCCCACTCCTGTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
3UTR CAA 90 bp ACACAGGAGAGTTTCAAACAGCTTAACACTGATTGGAAAACAAGCTaGGGACATCCCTCTACAGTAACTCCACTGCTGGCAAGAGCCCAG +
Preference number: 2 (lower is better)
Translates to: TQESFKQLNTDWKTS*GHPSTVTPLLARAQ
Trigger: CTGGGCTCTTGCCAGCAGTGGAGTTACTGTAGAGGGATGTCCCAAGCTTGTTTTCCAATCAGTGTTAAGCTGTTTGAAACTCTCCTGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
3UTR-3UTR GCA 90 bp CCATTCTGGCTTAGAGTCCTTAAATGGTGGTCAGGTGTTTTCCCAACTGTCCAGGAGGCTTTGGGTTTTTaGAGTTTCCATCTACCCAGG +
Preference number: 2 (lower is better)
Translates to: PFWLRVLKWWSGVFPTVQEALGF*SFHLPR
Trigger: CCTGGGTAGATGGAAACTGCAAAAACCCAAAGCCTC...CTGGACAGTTGGGAAAACACCTGACCACCATTTAAGGACTCTAAGCCAGAATGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000646520.1
ENST00000651849.1
3UTR-3UTR GCA 90 bp TGGTCAGGTGTTTTCCCAACTGTCCAGTGGACCTTAGGCCCTTTGGCCCAAGTGAATCTTTGGACAGTATaGATGTGTGTCTACAAACAC +
Preference number: 2 (lower is better)
Translates to: WSGVFPTVQWTLGPLAQVNLWTV*MCVYKH
Trigger: GTGTTTGTAGACACACATGCATACTGTCCAAAGATT...CACTTGGGCCAAAGGGCCTAAGGTCCACTGGACAGTTGGGAAAACACCTGACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000646520.1
ENST00000651849.1
3UTR-3UTR CCA 90 bp GAAATCTTTGGCAAGAATATACTGCAGTGCGGAGTGTTGTGTGTGCGTAGGTGTTTCTGGGTTCAAGAGTaGTCAGGATTCATGGGTCCC +
Preference number: 2 (lower is better)
Translates to: EIFGKNILQCGVLCVRRCFWVQE*SGFMGP
Trigger: GGGACCCATGAATCCTGACCACTCTTGAACCCAGAA...ACACCTACGCACACACAACACTCCGCACTGCAGTATATTCTTGCCAAAGATTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
3UTR-3UTR CCA 90 bp TTGGAGGCTTTGGGTTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTCCAAAGTCCTCCTTCTaGGTTCAAGAGTGGTCAGGA +
Preference number: 2 (lower is better)
Translates to: LEALGFCSFHLPRGIQVLPKSSF*VQEWSG
Trigger: TCCTGACCACTCTTGAACCCAGAAGGAGGACTTTGG...AAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAACCCAAAGCCTCCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000615025.4
ENST00000646520.1
ENST00000651849.1
3UTR-3UTR CCA 90 bp TTCCTTCGCAGGTCCCCTCTCCATTGTTTTCTCGCCCAATCCTTCCCTCTTGCTTACAAAGGAAGGGGATaGGAAATATCTCCTATCTTG +
Preference number: 2 (lower is better)
Translates to: FLRRSPLHCFLAQSFPLAYKGRG*EISPIL
Trigger: CAAGATAGGAGATATTTCCCATCCCCTTCCTTTGTA...AGCAAGAGGGAAGGATTGGGCGAGAAAACAATGGAGAGGGGACCTGCGAAGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
3UTR-3UTR TCA 90 bp GAAATCTTTGGCAAGAATATACTGCAGTGCGGAGTGTTGTGTGTGCGTAGGTGTCCCCATCATTCGCCTTaGAAAGTCACACTCTCAGAA +
Preference number: 2 (lower is better)
Translates to: EIFGKNILQCGVLCVRRCPHHSP*KVTLSE
Trigger: TTCTGAGAGTGTGACTTTTCAAGGCGAATGATGGGG...ACACCTACGCACACACAACACTCCGCACTGCAGTATATTCTTGCCAAAGATTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
3UTR-3UTR GCA 90 bp TTGATTTCCCCTTGCAAAGCAGTTGAGTTAGGGAGACAGAGCTTTTCCATTCCCGAGGCTTTGGGTTTTTaGAGTTTCCATCTACCCAGG +
Preference number: 2 (lower is better)
Translates to: LISPCKAVELGRQSFSIPEALGF*SFHLPR
Trigger: CCTGGGTAGATGGAAACTGCAAAAACCCAAAGCCTC...GGGAATGGAAAAGCTCTGTCTCCCTAACTCAACTGCTTTGCAAGGGGAAATCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000615025.4
ENST00000646520.1
ENST00000651849.1
3UTR-3UTR GCA 90 bp GATCTAGATCAATGTGTGAGGATGTGGGTGCAGACACACACCCACACGACAATAAGCTTGATTTCCCCTTaGAAAGCAGTTGAGTTAGGG +
Preference number: 2 (lower is better)
Translates to: DLDQCVRMWVQTHTHTTISLISP*KAVELG
Trigger: CCCTAACTCAACTGCTTTGCAAGGGGAAATCAAGCT...TATTGTCGTGTGGGTGTGTGTCTGCACCCACATCCTCACACATTGATCTAGATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000615025.4
ENST00000646520.1
ENST00000651849.1
3UTR-3UTR GCA 90 bp ATGTCCAGGATAAGGAGCATACACCAGGATTTATACACGGTGGCAGCGGCTATAAGCTTGATTTCCCCTTaGAAAGCAGTTGAGTTAGGG +
Preference number: 2 (lower is better)
Translates to: MSRIRSIHQDLYTVAAAISLISP*KAVELG
Trigger: CCCTAACTCAACTGCTTTGCAAGGGGAAATCAAGCT...TATAGCCGCTGCCACCGTGTATAAATCCTGGTGTATGCTCCTTATCCTGGACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
3UTR-3UTR GCA 90 bp GAAATCTTTGGCAAGAATATACTGCAGTGCGGAGTGTTGTGTGTGCGTAGGTGTCAAAGAGACCTGAGGTaGCTTGGGTCTGAGATACTT +
Preference number: 2 (lower is better)
Translates to: EIFGKNILQCGVLCVRRCQRDLR*LGSEIL
Trigger: AAGTATCTCAGACCCAAGGCACCTCAGGTCTCTTTG...ACACCTACGCACACACAACACTCCGCACTGCAGTATATTCTTGCCAAAGATTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
3UTR-3UTR CCA 90 bp TTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTCTCCTCCATCTTTCTTCTGGGTTCAAGAGTaGTCAGGATTCATGGGTCCC +
Preference number: 2 (lower is better)
Translates to: FLQFPSTQGNPSSSPPSFFWVQE*SGFMGP
Trigger: GGGACCCATGAATCCTGACCACTCTTGAACCCAGAA...GAAAGATGGAGGAGAAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000615025.4
ENST00000646520.1
ENST00000651849.1
3UTR-3UTR CCA 90 bp TTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTCTCCTCCATCTTTCCCAAAGTCCTCCTTCTaGGTTCAAGAGTGGTCAGGA +
Preference number: 2 (lower is better)
Translates to: FLQFPSTQGNPSSSPPSFPKSSF*VQEWSG
Trigger: TCCTGACCACTCTTGAACCCAGAAGGAGGACTTTGG...GAAAGATGGAGGAGAAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000615025.4
ENST00000646520.1
ENST00000651849.1
3UTR-3UTR CCA 90 bp GTACAGGAGTGGGGACGCGTCAGTGTACAATACATTCATGTCCAGGATAAGGAGACCAACCCTAATCTTTaGACAGTATGCATGTGTGTC +
Preference number: 2 (lower is better)
Translates to: VQEWGRVSVQYIHVQDKETNPNL*TVCMCV
Trigger: GACACACATGCATACTGTCCAAAGATTAGGGTTGGT...CTCCTTATCCTGGACATGAATGTATTGTACACTGACGCGTCCCCACTCCTGTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
3UTR-3UTR GCA 90 bp ATTTACAAAGGAAGGGGATGGGAAATATCTCCTATCTTGGAAGATAATTGGGGTCAAGGAGACCCTGGCTaGTTCAAGAACAAAGGCCCC +
Preference number: 2 (lower is better)
Translates to: IYKGRGWEISPILEDNWGQGDPG*FKNKGP
Trigger: GGGGCCTTTGTTCTTGAAGCAGCCAGGGTCTCCTTG...ACCCCAATTATCTTCCAAGATAGGAGATATTTCCCATCCCCTTCCTTTGTAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
3UTR-3UTR TCA 90 bp ATTTACAAAGGAAGGGGATGGGAAATATCTCCTATCTTGGAAGATAATTGGGGTTGGCTCTGTTTGGTTTaGCAACCTACCCCACAGGTG +
Preference number: 2 (lower is better)
Translates to: IYKGRGWEISPILEDNWGWLCLV*QPTPQV
Trigger: CACCTGTGGGGTAGGTTGTCAAACCAAACAGAGCCA...ACCCCAATTATCTTCCAAGATAGGAGATATTTCCCATCCCCTTCCTTTGTAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
3UTR-3UTR CCA 90 bp ATGTCCAGGATAAGGAGCATACACCAGGATTTATACACGGTGGCAGCGGCTATAGTGAATTTTCCATTCTaGCTTAGAGTCCTTAAATGG +
Preference number: 2 (lower is better)
Translates to: MSRIRSIHQDLYTVAAAIVNFPF*LRVLKW
Trigger: CCATTTAAGGACTCTAAGCCAGAATGGAAAATTCAC...TATAGCCGCTGCCACCGTGTATAAATCCTGGTGTATGCTCCTTATCCTGGACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
3UTR-3UTR CCA 90 bp GAAATCTTTGGCAAGAATATACTGCAGTGCGGAGTGTTGTGTGTGCGTAGGTGTACAGATCTCTTCCTATaGATACACATATCTCTACCT +
Preference number: 2 (lower is better)
Translates to: EIFGKNILQCGVLCVRRCTDLFL*IHISLP
Trigger: AGGTAGAGATATGTGTATCCATAGGAAGAGATCTGT...ACACCTACGCACACACAACACTCCGCACTGCAGTATATTCTTGCCAAAGATTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
3UTR-3UTR CAA 90 bp CTGGACAGCTGGTGGCAGCACGGGACTGAACCTGCTGGGGTCTGCGTCGCTGCGCCCCAGCCAGGCTGCTaGAAGGGTCTGATACACCGC +
Preference number: 3 (lower is better)
Translates to: LDSWWQHGTEPAGVCVAAPQPGC*KGLIHR
Trigger: GCGGTGTATCAGACCCTTCAAGCAGCCTGGCTGGGG...CGCAGCGACGCAGACCCCAGCAGGTTCAGTCCCGTGCTGCCACCAGCTGTCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
3UTR GCA 72 bp AGGGTCTGGCGGCACCCAGGGTCACTAGAGTGCAGGTaGAGGCACCAGGAGAGAGCCTCTGTCACCCATAGC +
Preference number: 3 (lower is better)
Translates to: RVWRHPGSLECR*RHQERASVTHS
Trigger: GCTATGGGTGACAGAGGCTCTCTCCTGGTGCCTGCACCTGCACTCTAGTGACCCTGGGTGCCGCCAGACCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000615025.4
ENST00000646520.1
ENST00000651849.1
3UTR-3UTR CAA 90 bp GTGAGGAAGGGAAAAGCGACCGTGAAAGCTGACCCCAGACTCAGTCCTGGGCCCGCTGAGCCACATGCCTaGGGGAAGACACCCCGAGCT +
Preference number: 3 (lower is better)
Translates to: VRKGKATVKADPRLSPGPAEPHA*GKTPRA
Trigger: AGCTCGGGGTGTCTTCCCCAAGGCATGTGGCTCAGC...GGGCCCAGGACTGAGTCTGGGGTCAGCTTTCACGGTCGCTTTTCCCTTCCTCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
3UTR-3UTR CAA 90 bp CGCAGGGATGCTGGGAGGGAGTTACCAGCTTTCTGGCATGAATGGGTCCTCCCGCCCCAGCCAGGCTGCTaGAAGGGTCTGATACACCGC +
Preference number: 3 (lower is better)
Translates to: RRDAGRELPAFWHEWVLPPQPGC*KGLIHR
Trigger: GCGGTGTATCAGACCCTTCAAGCAGCCTGGCTGGGG...CGGGAGGACCCATTCATGCCAGAAAGCTGGTAACTCCCTCCCAGCATCCCTGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
3UTR TCA 72 bp GCCAAAGGCTGGGACATGTGCAACCCCTCCCAATGCTaGGCCCCACACAGTCTAGGGAAGGCCAAGGCCAGG +
Preference number: 3 (lower is better)
Translates to: AKGWDMCNPSQC*APHSLGKAKAR
Trigger: CCTGGCCTTGGCCTTCCCTAGACTGTGTGGGGCTCAGCATTGGGAGGGGTTGCACATGTCCCAGCCTTTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
3UTR GCA 72 bp AAGAGAAGGGTCTGGCGGCACCCAGGGTCACTAGAGTaGAGGTGCAGGCACCAGGAGAGAGCCTCTGTCACC +
Preference number: 3 (lower is better)
Translates to: KRRVWRHPGSLE*RCRHQERASVT
Trigger: GGTGACAGAGGCTCTCTCCTGGTGCCTGCACCTGCACTCTAGTGACCCTGGGTGCCGCCAGACCCTTCTCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000615025.4
ENST00000646520.1
ENST00000651849.1
3UTR GCA 72 bp TGGACCTTAGGCCCTTTGGCCCAAGTGCAAGCCTTCTaGCCTCTGCTGCATGGGCAGCGTGGCTCAGCTAGG +
Preference number: 3 (lower is better)
Translates to: WTLGPLAQVQAF*PLLHGQRGSAR
Trigger: CCTAGCTGAGCCACGCTGCCCATGCAGCAGAGGGCAGAAGGCTTGCACTTGGGCCAAAGGGCCTAAGGTCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000646520.1
ENST00000651849.1
3UTR GCA 72 bp AGCTGGTGGCAGCACGGGACTGAACCTGCTGGGGTCTaGGTCGCTGCGATGTCCATGACTCCCTGGCTCTTT +
Preference number: 3 (lower is better)
Translates to: SWWQHGTEPAGV*VAAMSMTPWLF
Trigger: AAAGAGCCAGGGAGTCATGGACATCGCAGCGACGCAGACCCCAGCAGGTTCAGTCCCGTGCTGCCACCAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
3UTR-3UTR CAA 90 bp GGCTTCTGGCCAAGGCAGGACAGGGCGATGCCATTGCAGACCCTCCCACTCCTGTCACCCATAGCTTGGTaGTTTGTCCCTCCCCTGCTG +
Preference number: 3 (lower is better)
Translates to: GFWPRQDRAMPLQTLPLLSPIAW*FVPPLL
Trigger: CAGCAGGGGAGGGACAAACAACCAAGCTATGGGTGA...CAGGAGTGGGAGGGTCTGCAATGGCATCGCCCTGTCCTGCCTTGGCCAGAAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000615025.4
ENST00000646520.1
ENST00000651849.1
3UTR TCA 72 bp CAGGGATGCTGGGAGGGAGTTACCAGCTTTCTGGCATaGATGGGTCCTCCCGCAGGGGCACACATGGCTCAG +
Preference number: 3 (lower is better)
Translates to: QGCWEGVTSFLA*MGPPAGAHMAQ
Trigger: CTGAGCCATGTGTGCCCCTGCGGGAGGACCCATTCATGCCAGAAAGCTGGTAACTCCCTCCCAGCATCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
3UTR GCA 72 bp GCCGTTTATAGGGGGATCACACTTGTCCAGGAGGGCTaGCCCTCCTGCTTTCACACAACCACTGGCCCCACC +
Preference number: 3 (lower is better)
Translates to: AVYRGITLVQEG*PSCFHTTTGPT
Trigger: GGTGGGGCCAGTGGTTGTGTGAAAGCAGGAGGGGCAGCCCTCCTGGACAAGTGTGATCCCCCTATAAACGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
3UTR CCA 72 bp GCAGGCACCAGGAGAGAGCCTCTGTCACCCATAGCTTaGTTGTTTGTCCCTCCCCTGCTGCACTGCCACCAC +
Preference number: 3 (lower is better)
Translates to: AGTRREPLSPIA*LFVPPLLHCHH
Trigger: GTGGTGGCAGTGCAGCAGGGGAGGGACAAACAACCAAGCTATGGGTGACAGAGGCTCTCTCCTGGTGCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000615025.4
ENST00000646520.1
ENST00000651849.1
3UTR CCA 72 bp ACAGGGCGATGCCATTGCAGACCCTCCCACTCCTGCTaGGGTCTTTGTAGAAGAGAAGGGTCTGGCGGCACC +
Preference number: 3 (lower is better)
Translates to: TGRCHCRPSHSC*GLCRREGSGGT
Trigger: GGTGCCGCCAGACCCTTCTCTTCTACAAAGACCCCAGCAGGAGTGGGAGGGTCTGCAATGGCATCGCCCTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000615025.4
ENST00000646520.1
ENST00000651849.1
3UTR CCA 72 bp GATGCTGGGAGGGAGTTACCAGCTTTCTGGCATGAATaGGTCCTCCCGCAGGGGCACACATGGCTCAGGCTG +
Preference number: 3 (lower is better)
Translates to: DAGRELPAFWHE*VLPQGHTWLRL
Trigger: CAGCCTGAGCCATGTGTGCCCCTGCGGGAGGACCCATTCATGCCAGAAAGCTGGTAACTCCCTCCCAGCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
3UTR CCA 72 bp TTCCGCAGGGATGCTGGGAGGGAGTTACCAGCTTTCTaGCATGAATGGGTCCTCCCGCAGGGGCACACATGG +
Preference number: 3 (lower is better)
Translates to: FRRDAGRELPAF*HEWVLPQGHTW
Trigger: CCATGTGTGCCCCTGCGGGAGGACCCATTCATGCCAGAAAGCTGGTAACTCCCTCCCAGCATCCCTGCGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
3UTR CCA 72 bp GAACCAGAACCACCACGCAGATGGTGGGGAGGCCGCTaGGAGGATTTGAGCTGTCCACTAGAGGCATCGCTG +
Preference number: 3 (lower is better)
Translates to: EPEPPRRWWGGR*EDLSCPLEASL
Trigger: CAGCGATGCCTCTAGTGGACAGCTCAAATCCTCCCAGCGGCCTCCCCACCATCTGCGTGGTGGTTCTGGTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646520.1
3UTR-3UTR CAA 90 bp CCAAGGCAGGACAGGGCGATGCCATTGCAGACCCTCCCACTCCTGCTGGGGTCTGTGGCTCTGTTTGGTTaGACAACCTACCCCACAGGT +
Preference number: 3 (lower is better)
Translates to: PRQDRAMPLQTLPLLLGSVALFG*TTYPTG
Trigger: ACCTGTGGGGTAGGTTGTCAAACCAAACAGAGCCAC...AGACCCCAGCAGGAGTGGGAGGGTCTGCAATGGCATCGCCCTGTCCTGCCTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000615025.4
ENST00000646520.1
ENST00000651849.1
3UTR-3UTR CAA 90 bp GGCTTCTGGCCAAGGCAGGACAGGGCGATGCCATTGCAGACCCTCCCACTCCTGTCTGTCACCCATAGCTaGGTTGTTTGTCCCTCCCCT +
Preference number: 3 (lower is better)
Translates to: GFWPRQDRAMPLQTLPLLSVTHS*VVCPSP
Trigger: AGGGGAGGGACAAACAACCAAGCTATGGGTGACAGA...CAGGAGTGGGAGGGTCTGCAATGGCATCGCCCTGTCCTGCCTTGGCCAGAAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000615025.4
ENST00000646520.1
ENST00000651849.1
3UTR-3UTR CAA 90 bp GTGAGGAAGGGAAAAGCGACCGTGAAAGCTGACCCCAGACTCAGTCCTGGGCCCCCCAGCAGGAGCAACTaGCCTTTCTTGCTGCTGAGC +
Preference number: 3 (lower is better)
Translates to: VRKGKATVKADPRLSPGPPSRSN*PFLLLS
Trigger: GCTCAGCAGCAAGAAAGGCAAGTTGCTCCTGCTGGG...GGGCCCAGGACTGAGTCTGGGGTCAGCTTTCACGGTCGCTTTTCCCTTCCTCAC
60% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
3UTR-3UTR CAA 90 bp CGCAGGGATGCTGGGAGGGAGTTACCAGCTTTCTGGCATGAATGGGTCCTCCCGTGGACCTTAGGCCCTTaGGCCCAAGTGCAAGCCTTC +
Preference number: 3 (lower is better)
Translates to: RRDAGRELPAFWHEWVLPWTLGP*AQVQAF
Trigger: GAAGGCTTGCACTTGGGCCAAAGGGCCTAAGGTCCA...CGGGAGGACCCATTCATGCCAGAAAGCTGGTAACTCCCTCCCAGCATCCCTGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
3UTR-3UTR CAA 90 bp GTGTGCATGGGTGCACAGCCCGCCGTGACACAGAAGGGCTCTGGTGCAGGGCCCTCCCCATCATTCGCCTaGAAAAGTCACACTCTCAGA +
Preference number: 3 (lower is better)
Translates to: VCMGAQPAVTQKGSGAGPSPSFA*KSHTLR
Trigger: TCTGAGAGTGTGACTTTTCAAGGCGAATGATGGGGA...GGGCCCTGCACCAGAGCCCTTCTGTGTCACGGCGGGCTGTGCACCCATGCACAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
3UTR TCA 72 bp CTGAACCTGCTGGGGTCTGCGTCGCTGCGATGTCCATaGCTCCCTGGCTCTTTGTTGCCCATCTTCTCCCAG +
Preference number: 3 (lower is better)
Translates to: LNLLGSASLRCP*LPGSLLPIFSQ
Trigger: CTGGGAGAAGATGGGCAACAAAGAGCCAGGGAGTCATGGACATCGCAGCGACGCAGACCCCAGCAGGTTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
3UTR GCA 72 bp AAACCTCAGAACAAATTCGCTCCAGCCTCTGCTTTCTaGTTGGCCGCTCAGCGCCCGGGGATGGAGGAGTGC +
Preference number: 3 (lower is better)
Translates to: KPQNKFAPASAF*LAAQRPGMEEC
Trigger: GCACTCCTCCATCCCCGGGCGCTGAGCGGCCAAGCAGAAAGCAGAGGCTGGAGCGAATTTGTTCTGAGGTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453356.1
3UTR GCA 72 bp GCCACTGAAACCTCAGAACAAATTCGCTCCAGCCTCTaGTTTCTGCTTGGCCGCTCAGCGCCCGGGGATGGA +
Preference number: 3 (lower is better)
Translates to: ATETSEQIRSSL*FLLGRSAPGDG
Trigger: TCCATCCCCGGGCGCTGAGCGGCCAAGCAGAAAGCAGAGGCTGGAGCGAATTTGTTCTGAGGTTTCAGTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453356.1
3UTR-3UTR CAA 90 bp AAGAGAAGGGTCTGGCGGCACCCAGGGTCACTAGAGTGCAGGTGCAGGCACCAGGTGGCTCTGTTTGGTTaGACAACCTACCCCACAGGT +
Preference number: 3 (lower is better)
Translates to: KRRVWRHPGSLECRCRHQVALFG*TTYPTG
Trigger: ACCTGTGGGGTAGGTTGTCAAACCAAACAGAGCCAC...CTGGTGCCTGCACCTGCACTCTAGTGACCCTGGGTGCCGCCAGACCCTTCTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000615025.4
ENST00000646520.1
ENST00000651849.1
3UTR-3UTR CAA 90 bp CCCAACTGTCCAGTGGACCTTAGGCCCTTTGGCCCAAGTGCAAGCCTTCTGCCCTCACCCATAGCTTGGTaGTTTGTCCCTCCCCTGCTG +
Preference number: 3 (lower is better)
Translates to: PNCPVDLRPFGPSASLLPSPIAW*FVPPLL
Trigger: CAGCAGGGGAGGGACAAACAACCAAGCTATGGGTGA...GGGCAGAAGGCTTGCACTTGGGCCAAAGGGCCTAAGGTCCACTGGACAGTTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000646520.1
ENST00000651849.1
3UTR-3UTR CAA 90 bp TCTGCCCTCTGCTGCATGGGCAGCGTGGCTCAGCTAGGGAAACCAAGGCAGAAACCCAGCAGGAGCAACTaGCCTTTCTTGCTGCTGAGC +
Preference number: 3 (lower is better)
Translates to: SALCCMGSVAQLGKPRQKPSRSN*PFLLLS
Trigger: GCTCAGCAGCAAGAAAGGCAAGTTGCTCCTGCTGGG...TTTCTGCCTTGGTTTCCCTAGCTGAGCCACGCTGCCCATGCAGCAGAGGGCAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000646520.1
ENST00000651849.1
3UTR-3UTR CAA 90 bp GGCTTCTGGCCAAGGCAGGACAGGGCGATGCCATTGCAGACCCTCCCACTCCTGTGGACCTGGTTAGTTTaGGAGGCTTTGGGTTTTTGC +
Preference number: 3 (lower is better)
Translates to: GFWPRQDRAMPLQTLPLLWTWLV*EALGFC
Trigger: GCAAAAACCCAAAGCCTCCAAAACTAACCAGGTCCA...CAGGAGTGGGAGGGTCTGCAATGGCATCGCCCTGTCCTGCCTTGGCCAGAAGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000615025.4
ENST00000646520.1
ENST00000651849.1
3UTR-3UTR CAA 90 bp CGCAGGGATGCTGGGAGGGAGTTACCAGCTTTCTGGCATGAATGGGTCCTCCCGTCTGTCACCCATAGCTaGGTTGTTTGTCCCTCCCCT +
Preference number: 3 (lower is better)
Translates to: RRDAGRELPAFWHEWVLPSVTHS*VVCPSP
Trigger: AGGGGAGGGACAAACAACCAAGCTATGGGTGACAGA...CGGGAGGACCCATTCATGCCAGAAAGCTGGTAACTCCCTCCCAGCATCCCTGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
3UTR-3UTR CAA 90 bp GCAGACCCTCCCACTCCTGCTGGGGTCTTTGTAGAAGAGAAGGGTCTGGCGGCATCTGTCACCCATAGCTaGGTTGTTTGTCCCTCCCCT +
Preference number: 3 (lower is better)
Translates to: ADPPTPAGVFVEEKGLAASVTHS*VVCPSP
Trigger: AGGGGAGGGACAAACAACCAAGCTATGGGTGACAGA...TGCCGCCAGACCCTTCTCTTCTACAAAGACCCCAGCAGGAGTGGGAGGGTCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000615025.4
ENST00000646520.1
ENST00000651849.1
3UTR-3UTR CAA 90 bp TTCCTTCGCAGGTCCCCTCTCCATTGTTTTCTCGCCCAATCCTTCCCTCTTGCTGCTGAGCCACATGCCTaGGGGAAGACACCCCGAGCT +
Preference number: 3 (lower is better)
Translates to: FLRRSPLHCFLAQSFPLAAEPHA*GKTPRA
Trigger: AGCTCGGGGTGTCTTCCCCAAGGCATGTGGCTCAGC...AGCAAGAGGGAAGGATTGGGCGAGAAAACAATGGAGAGGGGACCTGCGAAGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
3UTR CCA 72 bp CACTTGCACATGCGCACACACGTCCTGTGTTACCACTaGCCAAGGAAACGCGAGTCTCAGGATTCCAGGGCC +
Preference number: 3 (lower is better)
Translates to: HLHMRTHVLCYH*PRKRESQDSRA
Trigger: GGCCCTGGAATCCTGAGACTCGCGTTTCCTTGGCCAGTGGTAACACAGGACGTGTGTGCGCATGTGCAAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
3UTR CCA 72 bp TCCACTAGAGGCATCGCTGAAGCCCACCTGGATCTCTaGAGAGGCCCCTTTTTGCCCACCAGAGACATGGCA +
Preference number: 3 (lower is better)
Translates to: STRGIAEAHLDL*RGPFLPTRDMA
Trigger: TGCCATGTCTCTGGTGGGCAAAAAGGGGCCTCTCCAGAGATCCAGGTGGGCTTCAGCGATGCCTCTAGTGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000646520.1
3UTR CCA 72 bp TTGAGCTGTCCACTAGAGGCATCGCTGAAGCCCACCTaGATCTCTGGAGAGGCCCCTTTTTGCCCACCAGAG +
Preference number: 3 (lower is better)
Translates to: LSCPLEASLKPT*ISGEAPFCPPE
Trigger: CTCTGGTGGGCAAAAAGGGGCCTCTCCAGAGATCCAGGTGGGCTTCAGCGATGCCTCTAGTGGACAGCTCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000646520.1
3UTR-3UTR CAA 90 bp CGATGCCATTGCAGACCCTCCCACTCCTGCTGGGGTCTTTGTAGAAGAGAAGGGTTCCCTCTCCCCACGTaGCACTTTCTTCTCTCCTCC +
Preference number: 3 (lower is better)
Translates to: RCHCRPSHSCWGLCRREGFPLPT*HFLLSS
Trigger: GGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGGGAA...CCCTTCTCTTCTACAAAGACCCCAGCAGGAGTGGGAGGGTCTGCAATGGCATCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000615025.4
ENST00000646520.1
ENST00000651849.1
3UTR-3UTR CAA 90 bp GTAGAAGAGAAGGGTCTGGCGGCACCCAGGGTCACTAGAGTGCAGGTGCAGGCAGGAGGCTTTGGGTTTTaGCAGTTTCCATCTACCCAG +
Preference number: 3 (lower is better)
Translates to: VEEKGLAAPRVTRVQVQAGGFGF*QFPSTQ
Trigger: CTGGGTAGATGGAAACTGCAAAAACCCAAAGCCTCC...TGCCTGCACCTGCACTCTAGTGACCCTGGGTGCCGCCAGACCCTTCTCTTCTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000615025.4
ENST00000646520.1
ENST00000651849.1
3UTR-3UTR CAA 90 bp GCTATCGCTGAGACTCCACCAATTGGTTGGCCTACAGGCCTCACCTCCCGACTCCCCAATCCTTCCCTCTaGCTCCCTTTGGGAAAAAGC +
Preference number: 3 (lower is better)
Translates to: AIAETPPIGWPTGLTSRLPNPSL*LPLGKS
Trigger: GCTTTTTCCCAAAGGGAGCAAGAGGGAAGGATTGGG...GAGTCGGGAGGTGAGGCCTGTAGGCCAACCAATTGGTGGAGTCTCAGCGATAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
3UTR GCA 72 bp GTTGGCCTACAGGCCTCACCTCCCGACTCCCCTCACTaGTGGGCGACATTGAATTTGAAGTTCCATTGCCCA +
Preference number: 3 (lower is better)
Translates to: VGLQASPPDSPH*WATLNLKFHCP
Trigger: TGGGCAATGGAACTTCAAATTCAATGTCGCCCAGCAGTGAGGGGAGTCGGGAGGTGAGGCCTGTAGGCCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
3UTR-3UTR CAA 90 bp GCTATCGCTGAGACTCCACCAATTGGTTGGCCTACAGGCCTCACCTCCCGACTCGGAGGCTTTGGGTTTTaGCAGTTTCCATCTACCCAG +
Preference number: 3 (lower is better)
Translates to: AIAETPPIGWPTGLTSRLGGFGF*QFPSTQ
Trigger: CTGGGTAGATGGAAACTGCAAAAACCCAAAGCCTCC...GAGTCGGGAGGTGAGGCCTGTAGGCCAACCAATTGGTGGAGTCTCAGCGATAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
3UTR-3UTR CAA 90 bp GTAGAAGAGAAGGGTCTGGCGGCACCCAGGGTCACTAGAGTGCAGGTGCAGGCATGGACCTGGTTAGTTTaGGAGGCTTTGGGTTTTTGC +
Preference number: 3 (lower is better)
Translates to: VEEKGLAAPRVTRVQVQAWTWLV*EALGFC
Trigger: GCAAAAACCCAAAGCCTCCAAAACTAACCAGGTCCA...TGCCTGCACCTGCACTCTAGTGACCCTGGGTGCCGCCAGACCCTTCTCTTCTAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000615025.4
ENST00000646520.1
ENST00000651849.1
3UTR-3UTR CAA 90 bp GCAGACCCTCCCACTCCTGCTGGGGTCTTTGTAGAAGAGAAGGGTCTGGCGGCATGGACCTGGTTAGTTTaGGAGGCTTTGGGTTTTTGC +
Preference number: 3 (lower is better)
Translates to: ADPPTPAGVFVEEKGLAAWTWLV*EALGFC
Trigger: GCAAAAACCCAAAGCCTCCAAAACTAACCAGGTCCA...TGCCGCCAGACCCTTCTCTTCTACAAAGACCCCAGCAGGAGTGGGAGGGTCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000615025.4
ENST00000646520.1
ENST00000651849.1
3UTR-3UTR CAA 90 bp GGGGAAGACACCCCGAGCTCAACAGCTGCCTGTTCTGACAGATCTCTTCCTATGTCACCCATAGCTTGGTaGTTTGTCCCTCCCCTGCTG +
Preference number: 3 (lower is better)
Translates to: GEDTPSSTAACSDRSLPMSPIAW*FVPPLL
Trigger: CAGCAGGGGAGGGACAAACAACCAAGCTATGGGTGA...CATAGGAAGAGATCTGTCAGAACAGGCAGCTGTTGAGCTCGGGGTGTCTTCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000615025.4
ENST00000646520.1
ENST00000651849.1
3UTR-3UTR CAA 90 bp CACATGCGCACACACGTCCTGTGTTACCACTGGCCAAGGAAACGCGAGTCTCAGTCTGTCACCCATAGCTaGGTTGTTTGTCCCTCCCCT +
Preference number: 3 (lower is better)
Translates to: HMRTHVLCYHWPRKRESQSVTHS*VVCPSP
Trigger: AGGGGAGGGACAAACAACCAAGCTATGGGTGACAGA...CTGAGACTCGCGTTTCCTTGGCCAGTGGTAACACAGGACGTGTGTGCGCATGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
3UTR-3UTR CAA 90 bp ACAGGGCGATGCCATTGCAGACCCTCCCACTCCTGCTGGGGTCTTTGTAGAAGATCTGTCACCCATAGCTaGGTTGTTTGTCCCTCCCCT +
Preference number: 3 (lower is better)
Translates to: TGRCHCRPSHSCWGLCRRSVTHS*VVCPSP
Trigger: AGGGGAGGGACAAACAACCAAGCTATGGGTGACAGA...TCTTCTACAAAGACCCCAGCAGGAGTGGGAGGGTCTGCAATGGCATCGCCCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000615025.4
ENST00000646520.1
ENST00000651849.1
3UTR-3UTR CAA 90 bp CCAGAACACCGTGATAGCAGGCTGATCAAACCGCTCACTTCCTCCCTGTTTTCCTGGACCTTAGGCCCTTaGGCCCAAGTGCAAGCCTTC +
Preference number: 3 (lower is better)
Translates to: PEHRDSRLIKPLTSSLFSWTLGP*AQVQAF
Trigger: GAAGGCTTGCACTTGGGCCAAAGGGCCTAAGGTCCA...GGAAAACAGGGAGGAAGTGAGCGGTTTGATCAGCCTGCTATCACGGTGTTCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
3UTR-3UTR CAA 90 bp ATGCGCACACACGTCCTGTGTTACCACTGGCCAAGGAAACGCGAGTCTCAGGATGATTGGGTGTCTGCCTaGACTCACAGGATCTCCCCA +
Preference number: 3 (lower is better)
Translates to: MRTHVLCYHWPRKRESQDDWVSA*THRISP
Trigger: TGGGGAGATCCTGTGAGTCAAGGCAGACACCCAATC...ATCCTGAGACTCGCGTTTCCTTGGCCAGTGGTAACACAGGACGTGTGTGCGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
3UTR GCA 72 bp CCTCACTGCTGGGCGACATTGAATTTGAAGTTCCATTaGCCAGCACCTCCAACCCCGACTCCCAAGTTCCCT +
Preference number: 3 (lower is better)
Translates to: PHCWATLNLKFH*PAPPTPTPKFP
Trigger: AGGGAACTTGGGAGTCGGGGTTGGAGGTGCTGGGCAATGGAACTTCAAATTCAATGTCGCCCAGCAGTGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
3UTR CCA 72 bp AATAAACACAGGGAACCAGAACCACCACGCAGATGGTaGGGAGGCCGCTGGGAGGATTTGAGCTGTCCACTA +
Preference number: 3 (lower is better)
Translates to: NKHREPEPPRRW*GGRWEDLSCPL
Trigger: TAGTGGACAGCTCAAATCCTCCCAGCGGCCTCCCCACCATCTGCGTGGTGGTTCTGGTTCCCTGTGTTTATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646520.1
3UTR CCA 72 bp ATGAATAAACACAGGGAACCAGAACCACCACGCAGATaGTGGGGAGGCCGCTGGGAGGATTTGAGCTGTCCA +
Preference number: 3 (lower is better)
Translates to: MNKHREPEPPRR*WGGRWEDLSCP
Trigger: TGGACAGCTCAAATCCTCCCAGCGGCCTCCCCACCATCTGCGTGGTGGTTCTGGTTCCCTGTGTTTATTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646520.1
3UTR-3UTR CAA 90 bp CGATGCCATTGCAGACCCTCCCACTCCTGCTGGGGTCTTTGTAGAAGAGAAGGGTTCTCTCCTCCGAAATaGGCCCAAAGTCCTCCTTCT +
Preference number: 3 (lower is better)
Translates to: RCHCRPSHSCWGLCRREGFSPPK*AQSPPS
Trigger: AGAAGGAGGACTTTGGGCCAATTTCGGAGGAGAGAA...CCCTTCTCTTCTACAAAGACCCCAGCAGGAGTGGGAGGGTCTGCAATGGCATCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000615025.4
ENST00000646520.1
ENST00000651849.1
3UTR-3UTR CAA 90 bp ACAGGGCGATGCCATTGCAGACCCTCCCACTCCTGCTGGGGTCTTTGTAGAAGAGGAGGCTTTGGGTTTTaGCAGTTTCCATCTACCCAG +
Preference number: 3 (lower is better)
Translates to: TGRCHCRPSHSCWGLCRRGGFGF*QFPSTQ
Trigger: CTGGGTAGATGGAAACTGCAAAAACCCAAAGCCTCC...TCTTCTACAAAGACCCCAGCAGGAGTGGGAGGGTCTGCAATGGCATCGCCCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000615025.4
ENST00000646520.1
ENST00000651849.1
3UTR-3UTR CAA 90 bp GGGCGATGCCATTGCAGACCCTCCCACTCCTGCTGGGGTCTTTGTAGAAGAGAAGGAGGCTTTGGGTTTTaGCAGTTTCCATCTACCCAG +
Preference number: 3 (lower is better)
Translates to: GRCHCRPSHSCWGLCRREGGFGF*QFPSTQ
Trigger: CTGGGTAGATGGAAACTGCAAAAACCCAAAGCCTCC...TTCTCTTCTACAAAGACCCCAGCAGGAGTGGGAGGGTCTGCAATGGCATCGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000615025.4
ENST00000646520.1
ENST00000651849.1
3UTR-3UTR CAA 90 bp ATGCGCACACACGTCCTGTGTTACCACTGGCCAAGGAAACGCGAGTCTCAGGATAGCAACTTGCCTTTCTaGCTGCTGAGCCACATGCCT +
Preference number: 3 (lower is better)
Translates to: MRTHVLCYHWPRKRESQDSNLPF*LLSHMP
Trigger: AGGCATGTGGCTCAGCAGCAAGAAAGGCAAGTTGCT...ATCCTGAGACTCGCGTTTCCTTGGCCAGTGGTAACACAGGACGTGTGTGCGCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
3UTR TCA 72 bp AGGATAAGGACTCCAGGTTTCTGGCCGGAGCCTCACTaGGCAGAAAGTAGGTTCCCCAGGGAGAATTCCAAC +
Preference number: 3 (lower is better)
Translates to: RIRTPGFWPEPH*AESRFPRENSN
Trigger: GTTGGAATTCTCCCTGGGGAACCTACTTTCTGCTCAGTGAGGCTCCGGCCAGAAACCTGGAGTCCTTATCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000646520.1
ENST00000651849.1
3UTR TCA 72 bp CTCCACCTTCTGCAGACACCCTCCTTTCCAACTCCCTaGAACAGAACGTCCACACTGACACAGCTCCTTGGA +
Preference number: 3 (lower is better)
Translates to: LHLLQTPSFPTP*NRTSTLTQLLG
Trigger: TCCAAGGAGCTGTGTCAGTGTGGACGTTCTGTTTCAGGGAGTTGGAAAGGAGGGTGTCTGCAGAAGGTGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
3UTR GCA 72 bp CCCTCTCCATTGTTTTCTCGCCCAATCCTTCCCTCTTaGTCCCTTTGGGAAAAAGCCACGTGGAGCTCACTG +
Preference number: 3 (lower is better)
Translates to: PSPLFSRPILPS*SLWEKATWSSL
Trigger: CAGTGAGCTCCACGTGGCTTTTTCCCAAAGGGAGCAAGAGGGAAGGATTGGGCGAGAAAACAATGGAGAGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
3UTR CCA 72 bp CTTCTCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTaGGTTCAAGAGTGGTCAGGATTCATGGGTCCCCTC +
Preference number: 3 (lower is better)
Translates to: LLSSEIGPKSSF*VQEWSGFMGPL
Trigger: GAGGGGACCCATGAATCCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGAGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000615025.4
ENST00000646520.1
ENST00000651849.1
3UTR CCA 72 bp ATCCTGGCCATTGGTGTCCACAGCTTTCAGAGCTACTaGAGGAGACGCTCAGATGACATGGGTCAAAGGCCT +
Preference number: 3 (lower is better)
Translates to: ILAIGVHSFQSY*RRRSDDMGQRP
Trigger: AGGCCTTTGACCCATGTCATCTGAGCGTCTCCTCCAGTAGCTCTGAAAGCTGTGGACACCAATGGCCAGGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
3UTR-3UTR CAA 90 bp GTACAGGAGTGGGGACGCGTCAGTGTACAATACATTCATGTCCAGGATAAGGAGGACTCCACCAATTGGTaGGCCTACAGGCCTCACCTC +
Preference number: 3 (lower is better)
Translates to: VQEWGRVSVQYIHVQDKEDSTNW*AYRPHL
Trigger: GAGGTGAGGCCTGTAGGCCAACCAATTGGTGGAGTC...CTCCTTATCCTGGACATGAATGTATTGTACACTGACGCGTCCCCACTCCTGTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
3UTR TCA 72 bp CCATCATTCGCCTTGAAAAGTCACACTCTCAGAAACTaGCTCCTTCCGCAGGGATGCTGGGAGGGAGTTACC +
Preference number: 3 (lower is better)
Translates to: PSFALKSHTLRN*LLPQGCWEGVT
Trigger: GGTAACTCCCTCCCAGCATCCCTGCGGAAGGAGTCAGTTTCTGAGAGTGTGACTTTTCAAGGCGAATGATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
3UTR CCA 72 bp TCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATTaGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTC +
Preference number: 3 (lower is better)
Translates to: SPHVALSSLLRN*PKVLLLGSRVV
Trigger: GACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000615025.4
ENST00000646520.1
ENST00000651849.1
3UTR CCA 72 bp CTTAAATGGTGGTCAGGTGTTTTCCCAACTGTCCAGTaGACCTTAGGCCCTTTGGCCCAAGTGCAAGCCTTC +
Preference number: 3 (lower is better)
Translates to: LKWWSGVFPTVQ*TLGPLAQVQAF
Trigger: GAAGGCTTGCACTTGGGCCAAAGGGCCTAAGGTCCACTGGACAGTTGGGAAAACACCTGACCACCATTTAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000646520.1
ENST00000651849.1
3UTR-3UTR CAA 90 bp GTACAGGAGTGGGGACGCGTCAGTGTACAATACATTCATGTCCAGGATAAGGAGGAATTTGAAGTTCCATaGCCCAGCACCTCCAACCCC +
Preference number: 3 (lower is better)
Translates to: VQEWGRVSVQYIHVQDKEEFEVP*PSTSNP
Trigger: GGGGTTGGAGGTGCTGGGCAATGGAACTTCAAATTC...CTCCTTATCCTGGACATGAATGTATTGTACACTGACGCGTCCCCACTCCTGTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
3UTR TCA 72 bp CTTCCACTTGATGTCCCACGGTGGCTCTGTTTGGTTTaGCAACCTACCCCACAGGTGGCCAGAAAAAGATTC +
Preference number: 3 (lower is better)
Translates to: LPLDVPRWLCLV*QPTPQVARKRF
Trigger: GAATCTTTTTCTGGCCACCTGTGGGGTAGGTTGTCAAACCAAACAGAGCCACCGTGGGACATCAAGTGGAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000615025.4
ENST00000646520.1
ENST00000651849.1
3UTR TCA 72 bp CCACAGCTTTCAGAGCTACTGGAGGAGACGCTCAGATaGCATGGGTCAAAGGCCTTTCCCAAACTTAGGATG +
Preference number: 3 (lower is better)
Translates to: PQLSELLEETLR*HGSKAFPKLRM
Trigger: CATCCTAAGTTTGGGAAAGGCCTTTGACCCATGTCATCTGAGCGTCTCCTCCAGTAGCTCTGAAAGCTGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
3UTR GCA 72 bp AAAACACACGCACACACATACATCCACACTTGCACATaGGCACACACGTCCTGTGTTACCACTGGCCAAGGA +
Preference number: 3 (lower is better)
Translates to: KTHAHTYIHTCT*AHTSCVTTGQG
Trigger: TCCTTGGCCAGTGGTAACACAGGACGTGTGTGCGCATGTGCAAGTGTGGATGTATGTGTGTGCGTGTGTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
3UTR CCA 72 bp TCTACAGTAACTCCACTGCTGGCAAGAGCCCAGGCGTaGGATATGAACAGAGGTCCTCCAACATTTTGGACA +
Preference number: 3 (lower is better)
Translates to: STVTPLLARAQA*DMNRGPPTFWT
Trigger: TGTCCAAAATGTTGGAGGACCTCTGTTCATATCCCACGCCTGGGCTCTTGCCAGCAGTGGAGTTACTGTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
3UTR-3UTR CAA 90 bp CACAGGGCAGAGTCCAGGAGCCAGAACACTTCCTTGGCTTGGAAAAGGAAAAAGTCTCAGTGCAAAGCTTaGGATTCTGGCTTGGCAACT +
Preference number: 3 (lower is better)
Translates to: HRAESRSQNTSLAWKRKKSQCKA*DSGLAT
Trigger: AGTTGCCAAGCCAGAATCCAAAGCTTTGCACTGAGA...CTTTTTCCTTTTCCAAGCCAAGGAAGTGTTCTGGCTCCTGGACTCTGCCCTGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310858.10
3UTR TCA 72 bp TGGGGAAGACACCCCGAGCTCAACAGCTGCCTGTTCTaGCAGATCTCTTCCTATGGATACACATATCTCTAC +
Preference number: 3 (lower is better)
Translates to: WGRHPELNSCLF*QISSYGYTYLY
Trigger: GTAGAGATATGTGTATCCATAGGAAGAGATCTGTCAGAACAGGCAGCTGTTGAGCTCGGGGTGTCTTCCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000615025.4
ENST00000646520.1
ENST00000651849.1
3UTR TCA 72 bp TCAGAACAAGGCAGAATCTCCTACTCACTAACCTCCTaGGAGCCGTTTATAGGGGGATCACACTTGTCCAGG +
Preference number: 3 (lower is better)
Translates to: SEQGRISYSLTS*EPFIGGSHLSR
Trigger: CCTGGACAAGTGTGATCCCCCTATAAACGGCTCTCAGGAGGTTAGTGAGTAGGAGATTCTGCCTTGTTCTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
3UTR TCA 72 bp GGAGGAGAGAAATGGGGAAACACAGCCTGCACACACTaGTGTGCTCTCACACACACGCACAAACAAAACACA +
Preference number: 3 (lower is better)
Translates to: GGEKWGNTACTH*CALTHTHKQNT
Trigger: TGTGTTTTGTTTGTGCGTGTGTGTGAGAGCACATCAGTGTGTGCAGGCTGTGTTTCCCCATTTCTCTCCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
3UTR CCA 72 bp AAGTTCTTCCACTTGATGTCCCACGGTGGCTCTGTTTaGTTTGACAACCTACCCCACAGGTGGCCAGAAAAA +
Preference number: 3 (lower is better)
Translates to: KFFHLMSHGGSV*FDNLPHRWPEK
Trigger: TTTTTCTGGCCACCTGTGGGGTAGGTTGTCAAACCAAACAGAGCCACCGTGGGACATCAAGTGGAAGAACTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000615025.4
ENST00000646520.1
ENST00000651849.1
3UTR-3UTR CAA 90 bp GAAATCTTTGGCAAGAATATACTGCAGTGCGGAGTGTTGTGTGTGCGTAGGTGTGTGGCTCTGTTTGGTTaGACAACCTACCCCACAGGT +
Preference number: 3 (lower is better)
Translates to: EIFGKNILQCGVLCVRRCVALFG*TTYPTG
Trigger: ACCTGTGGGGTAGGTTGTCAAACCAAACAGAGCCAC...ACACCTACGCACACACAACACTCCGCACTGCAGTATATTCTTGCCAAAGATTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
3UTR-3UTR CAA 90 bp GTACAGGAGTGGGGACGCGTCAGTGTACAATACATTCATGTCCAGGATAAGGAGGGAGTGAGACTAGATTaGATCACACTCACCACCCTT +
Preference number: 3 (lower is better)
Translates to: VQEWGRVSVQYIHVQDKEGVRLD*ITLTTL
Trigger: AAGGGTGGTGAGTGTGATCAAATCTAGTCTCACTCC...CTCCTTATCCTGGACATGAATGTATTGTACACTGACGCGTCCCCACTCCTGTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
3UTR GCA 72 bp AGAGAAATGGGGAAACACAGCCTGCACACACTGATGTaGTCTCACACACACGCACAAACAAAACACAGACAC +
Preference number: 3 (lower is better)
Translates to: REMGKHSLHTLM*SHTHAQTKHRH
Trigger: GTGTCTGTGTTTTGTTTGTGCGTGTGTGTGAGAGCACATCAGTGTGTGCAGGCTGTGTTTCCCCATTTCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
3UTR CCA 72 bp AAATGCAAACATCCCCAGCACAACGACCAATTAGGCTaGCAGCCACTGAAACCTCAGAACAAATTCGCTCCA +
Preference number: 3 (lower is better)
Translates to: KCKHPQHNDQLG*QPLKPQNKFAP
Trigger: TGGAGCGAATTTGTTCTGAGGTTTCAGTGGCTGCCAGCCTAATTGGTCGTTGTGCTGGGGATGTTTGCATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453356.1
3UTR-3UTR CAA 90 bp TTGGAGGCTTTGGGTTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTTTCTCTCCTCCGAAATaGGCCCAAAGTCCTCCTTCT +
Preference number: 3 (lower is better)
Translates to: LEALGFCSFHLPRGIQVLFSPPK*AQSPPS
Trigger: AGAAGGAGGACTTTGGGCCAATTTCGGAGGAGAGAA...AAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAACCCAAAGCCTCCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000615025.4
ENST00000646520.1
ENST00000651849.1
3UTR-3UTR CAA 90 bp ATGCGCACACACGTCCTGTGTTACCACTGGCCAAGGAAACGCGAGTCTCAGGATTTTGTTCCTTCTCTTTaGAGGACATCCATCTTCTTA +
Preference number: 3 (lower is better)
Translates to: MRTHVLCYHWPRKRESQDFVPSL*RTSIFL
Trigger: TAAGAAGATGGATGTCCTCAAAAGAGAAGGAACAAA...ATCCTGAGACTCGCGTTTCCTTGGCCAGTGGTAACACAGGACGTGTGTGCGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
3UTR-3UTR CAA 90 bp ATGTCCCACGGTGGCTCTGTTTGGTTTGACAACCTACCCCACAGGTGGCCAGAATTTGTTCCTTCTCTTTaGAGGACATCCATCTTCTTA +
Preference number: 3 (lower is better)
Translates to: MSHGGSVWFDNLPHRWPEFVPSL*RTSIFL
Trigger: TAAGAAGATGGATGTCCTCAAAAGAGAAGGAACAAA...TTCTGGCCACCTGTGGGGTAGGTTGTCAAACCAAACAGAGCCACCGTGGGACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000615025.4
ENST00000646520.1
ENST00000651849.1
3UTR-3UTR CAA 90 bp AGGTGCCTTGGGTCTGAGATACTTTCAAGCAAACAAGTTCTTCCACTTGATGTCGTGGCTCTGTTTGGTTaGACAACCTACCCCACAGGT +
Preference number: 3 (lower is better)
Translates to: RCLGSEILSSKQVLPLDVVALFG*TTYPTG
Trigger: ACCTGTGGGGTAGGTTGTCAAACCAAACAGAGCCAC...GACATCAAGTGGAAGAACTTGTTTGCTTGAAAGTATCTCAGACCCAAGGCACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000615025.4
ENST00000646520.1
ENST00000651849.1
3UTR-3UTR CAA 90 bp AGGTGCCTTGGGTCTGAGATACTTTCAAGCAAACAAGTTCTTCCACTTGATGTCTTCTCTCCTCCGAAATaGGCCCAAAGTCCTCCTTCT +
Preference number: 3 (lower is better)
Translates to: RCLGSEILSSKQVLPLDVFSPPK*AQSPPS
Trigger: AGAAGGAGGACTTTGGGCCAATTTCGGAGGAGAGAA...GACATCAAGTGGAAGAACTTGTTTGCTTGAAAGTATCTCAGACCCAAGGCACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000615025.4
ENST00000646520.1
ENST00000651849.1
3UTR-3UTR CAA 90 bp GTTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTCTCCTCCATCTTTTTCTCTCCTCCGAAATaGGCCCAAAGTCCTCCTTCT +
Preference number: 3 (lower is better)
Translates to: VFAVSIYPGESKFFSSIFFSPPK*AQSPPS
Trigger: AGAAGGAGGACTTTGGGCCAATTTCGGAGGAGAGAA...AAAGATGGAGGAGAAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000615025.4
ENST00000646520.1
ENST00000651849.1
3UTR GCA 72 bp TGCACTGCCACCACCAACCCTAATCTTTGGACAGTATaGATGTGTGTCTACAAACACATGGGACAAGGACAA +
Preference number: 3 (lower is better)
Translates to: CTATTNPNLWTV*MCVYKHMGQGQ
Trigger: TTGTCCTTGTCCCATGTGTTTGTAGACACACATGCATACTGTCCAAAGATTAGGGTTGGTGGTGGCAGTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000615025.4
ENST00000646520.1
ENST00000651849.1
3UTR-3UTR CAA 90 bp AGGTGCCTTGGGTCTGAGATACTTTCAAGCAAACAAGTTCTTCCACTTGATGTCTGGACCTGGTTAGTTTaGGAGGCTTTGGGTTTTTGC +
Preference number: 3 (lower is better)
Translates to: RCLGSEILSSKQVLPLDVWTWLV*EALGFC
Trigger: GCAAAAACCCAAAGCCTCCAAAACTAACCAGGTCCA...GACATCAAGTGGAAGAACTTGTTTGCTTGAAAGTATCTCAGACCCAAGGCACCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000615025.4
ENST00000646520.1
ENST00000651849.1
3UTR-3UTR CAA 90 bp GTACAGGAGTGGGGACGCGTCAGTGTACAATACATTCATGTCCAGGATAAGGAGAGGGATTTCTTACATTaGTTCTCAATGATGGGTCTG +
Preference number: 3 (lower is better)
Translates to: VQEWGRVSVQYIHVQDKERDFLH*FSMMGL
Trigger: CAGACCCATCATTGAGAACAAATGTAAGAAATCCCT...CTCCTTATCCTGGACATGAATGTATTGTACACTGACGCGTCCCCACTCCTGTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
3UTR GCA 72 bp GACAATATAGTGGAGGCACAGCAAAGAGACCTGAGGTaGCTTGGGTCTGAGATACTTTCAAGCAAACAAGTT +
Preference number: 3 (lower is better)
Translates to: DNIVEAQQRDLR*LGSEILSSKQV
Trigger: AACTTGTTTGCTTGAAAGTATCTCAGACCCAAGGCACCTCAGGTCTCTTTGCTGTGCCTCCACTATATTGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000615025.4
ENST00000646520.1
ENST00000651849.1
3UTR-3UTR CAA 90 bp CCCAGCTTGATTTCCCCTTGCAAAGCAGTTGAGTTAGGGAGACAGAGCTTTTCCTTTGTTCCTTCTCTTTaGAGGACATCCATCTTCTTA +
Preference number: 3 (lower is better)
Translates to: PSLISPCKAVELGRQSFSFVPSL*RTSIFL
Trigger: TAAGAAGATGGATGTCCTCAAAAGAGAAGGAACAAA...GGAAAAGCTCTGTCTCCCTAACTCAACTGCTTTGCAAGGGGAAATCAAGCTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000615025.4
ENST00000646520.1
ENST00000651849.1
3UTR CCA 72 bp CAGACACAGGAGAGTTTCAAACAGCTTAACACTGATTaGAAAACAAGCTTGGGACATCCCTCTACAGTAACT +
Preference number: 3 (lower is better)
Translates to: QTQESFKQLNTD*KTSLGHPSTVT
Trigger: AGTTACTGTAGAGGGATGTCCCAAGCTTGTTTTCCAATCAGTGTTAAGCTGTTTGAAACTCTCCTGTGTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
3UTR-3UTR CAA 90 bp ATTTACAAAGGAAGGGGATGGGAAATATCTCCTATCTTGGAAGATAATTGGGGTTGGACCTGGTTAGTTTaGGAGGCTTTGGGTTTTTGC +
Preference number: 3 (lower is better)
Translates to: IYKGRGWEISPILEDNWGWTWLV*EALGFC
Trigger: GCAAAAACCCAAAGCCTCCAAAACTAACCAGGTCCA...ACCCCAATTATCTTCCAAGATAGGAGATATTTCCCATCCCCTTCCTTTGTAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
3UTR-3UTR CAA 90 bp TCTAGATCAATGTGTGAGGATGTGGGTGCAGACACACACCCACACGACAATATATTTGTTCCTTCTCTTTaGAGGACATCCATCTTCTTA +
Preference number: 3 (lower is better)
Translates to: SRSMCEDVGADTHPHDNIFVPSL*RTSIFL
Trigger: TAAGAAGATGGATGTCCTCAAAAGAGAAGGAACAAA...TATATTGTCGTGTGGGTGTGTGTCTGCACCCACATCCTCACACATTGATCTAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000615025.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp CATGGGTGCACAGCCCGCCGTGACACAGAAGGGCTCTGGTGCAGGGCCCAGAGGCCGCACCCCACTGGGTaGTGGGCTGCTCGGGGAGGT +
Preference number: 4 (lower is better)
Translates to: HGCTARRDTEGLWCRAQRPHPTG*WAARGG
Trigger: ACCTCCCCGAGCAGCCCACCACCCAGTGGGGTGCGG...CCTCTGGGCCCTGCACCAGAGCCCTTCTGTGTCACGGCGGGCTGTGCACCCATG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp GGCTTCTGGCCAAGGCAGGACAGGGCGATGCCATTGCAGACCCTCCCACTCCTGGCCAGGTTGCCTTGGTaGGCCCCAGGGTGCCGGCCC +
Preference number: 4 (lower is better)
Translates to: GFWPRQDRAMPLQTLPLLARLPW*APGCRP
Trigger: GGGCCGGCACCCTGGGGCTCACCAAGGCAACCTGGC...CAGGAGTGGGAGGGTCTGCAATGGCATCGCCCTGTCCTGCCTTGGCCAGAAGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp CATGGGTGCACAGCCCGCCGTGACACAGAAGGGCTCTGGTGCAGGGCCCAGAGGAGGGGCTGGGGGCTCTaGAGGCTGCTTCTCCCGAGC +
Preference number: 4 (lower is better)
Translates to: HGCTARRDTEGLWCRAQRRGWGL*RLLLPS
Trigger: GCTCGGGAGAAGCAGCCTGCAGAGCCCCCAGCCCCT...CCTCTGGGCCCTGCACCAGAGCCCTTCTGTGTCACGGCGGGCTGTGCACCCATG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp GAGAAGGGTCTGGCGGCACCCAGGGTCACTAGAGTGCAGGTGCAGGCACCAGGAGGGACCGCACCCCACTaGGTGGTGGGCTGCTCGGGG +
Preference number: 4 (lower is better)
Translates to: EKGLAAPRVTRVQVQAPGGTAPH*VVGCSG
Trigger: CCCCGAGCAGCCCACCACCCAGTGGGGTGCGGTCCC...TCCTGGTGCCTGCACCTGCACTCTAGTGACCCTGGGTGCCGCCAGACCCTTCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp CTGGACAGCTGGTGGCAGCACGGGACTGAACCTGCTGGGGTCTGCGTCGCTGCGCCCTGCCCCTCTGGGTaGACCACTTCTCACCTGGGC +
Preference number: 4 (lower is better)
Translates to: LDSWWQHGTEPAGVCVAAPCPSG*TTSHLG
Trigger: GCCCAGGTGAGAAGTGGTTCACCCAGAGGGGCAGGG...CGCAGCGACGCAGACCCCAGCAGGTTCAGTCCCGTGCTGCCACCAGCTGTCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp GTGTGCATGGGTGCACAGCCCGCCGTGACACAGAAGGGCTCTGGTGCAGGGCCCGGGGATGGGGGTCTCTaGCAATGGCTGAGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: VCMGAQPAVTQKGSGAGPGDGGL*QWLRAG
Trigger: CCCAGCCCTCAGCCATTGGCAGAGACCCCCATCCCC...GGGCCCTGCACCAGAGCCCTTCTGTGTCACGGCGGGCTGTGCACCCATGCACAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp GAGAAGGGTCTGGCGGCACCCAGGGTCACTAGAGTGCAGGTGCAGGCACCAGGAAGGGGCGGTGGCCAGTaGCGGAGGCAGCAGCTGTGG +
Preference number: 4 (lower is better)
Translates to: EKGLAAPRVTRVQVQAPGRGGGQ*RRQQLW
Trigger: CCACAGCTGCTGCCTCCGCCACTGGCCACCGCCCCT...TCCTGGTGCCTGCACCTGCACTCTAGTGACCCTGGGTGCCGCCAGACCCTTCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000171887.8
ENST00000611415.4
CDS-3UTR CCA 90 bp CCAAGGCAGGACAGGGCGATGCCATTGCAGACCCTCCCACTCCTGCTGGGGTCTCCAGGACAGGGGCGGTaGCCAGTGGCGGAGGCAGCA +
Preference number: 4 (lower is better)
Translates to: PRQDRAMPLQTLPLLLGSPGQGR*PVAEAA
Trigger: TGCTGCCTCCGCCACTGGCCACCGCCCCTGTCCTGG...AGACCCCAGCAGGAGTGGGAGGGTCTGCAATGGCATCGCCCTGTCCTGCCTTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000171887.8
ENST00000611415.4
CDS-3UTR CCA 90 bp CATGGGTGCACAGCCCGCCGTGACACAGAAGGGCTCTGGTGCAGGGCCCAGAGGCTGATGGGCTGGAGGTaGGGCTGGACACTCGGGGTG +
Preference number: 4 (lower is better)
Translates to: HGCTARRDTEGLWCRAQRLMGWR*GWTLGV
Trigger: CACCCCGAGTGTCCAGCCCCACCTCCAGCCCATCAG...CCTCTGGGCCCTGCACCAGAGCCCTTCTGTGTCACGGCGGGCTGTGCACCCATG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp GAGAAGGGTCTGGCGGCACCCAGGGTCACTAGAGTGCAGGTGCAGGCACCAGGAAGCCGAGCCCCCTGCTaGGCGGGACCTGAGGTGCTG +
Preference number: 4 (lower is better)
Translates to: EKGLAAPRVTRVQVQAPGSRAPC*AGPEVL
Trigger: CAGCACCTCAGGTCCCGCCCAGCAGGGGGCTCGGCT...TCCTGGTGCCTGCACCTGCACTCTAGTGACCCTGGGTGCCGCCAGACCCTTCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp CTGGACAGCTGGTGGCAGCACGGGACTGAACCTGCTGGGGTCTGCGTCGCTGCGAGAGGCCCGTGGGGCTaGCTCAGGGGTTCCCAACGA +
Preference number: 4 (lower is better)
Translates to: LDSWWQHGTEPAGVCVAARGPWG*LRGSQR
Trigger: TCGTTGGGAACCCCTGAGCCAGCCCCACGGGCCTCT...CGCAGCGACGCAGACCCCAGCAGGTTCAGTCCCGTGCTGCCACCAGCTGTCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp GTGTGCATGGGTGCACAGCCCGCCGTGACACAGAAGGGCTCTGGTGCAGGGCCCTGCCCCCACTGGGACTaGACATGCCGCTGGCGACAG +
Preference number: 4 (lower is better)
Translates to: VCMGAQPAVTQKGSGAGPCPHWD*TCRWRQ
Trigger: CTGTCGCCAGCGGCATGTCCAGTCCCAGTGGGGGCA...GGGCCCTGCACCAGAGCCCTTCTGTGTCACGGCGGGCTGTGCACCCATGCACAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp ATTGGTTGGCCTACAGGCCTCACCTCCCGACTCCCCTCACTGCTGGGCGACATTGCCAGGTTGCCTTGGTaGGCCCCAGGGTGCCGGCCC +
Preference number: 4 (lower is better)
Translates to: IGWPTGLTSRLPSLLGDIARLPW*APGCRP
Trigger: GGGCCGGCACCCTGGGGCTCACCAAGGCAACCTGGC...AATGTCGCCCAGCAGTGAGGGGAGTCGGGAGGTGAGGCCTGTAGGCCAACCAAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp GGCTTCTGGCCAAGGCAGGACAGGGCGATGCCATTGCAGACCCTCCCACTCCTGCCTCCGCAGAGGGGCTaGGGGCTCTGCAGGCTGCTT +
Preference number: 4 (lower is better)
Translates to: GFWPRQDRAMPLQTLPLLPPQRG*GLCRLL
Trigger: AAGCAGCCTGCAGAGCCCCCAGCCCCTCTGCGGAGG...CAGGAGTGGGAGGGTCTGCAATGGCATCGCCCTGTCCTGCCTTGGCCAGAAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp GTGTGCATGGGTGCACAGCCCGCCGTGACACAGAAGGGCTCTGGTGCAGGGCCCCATACTGTCCATCACTaGCCGCCCGCCTCCGCAGAG +
Preference number: 4 (lower is better)
Translates to: VCMGAQPAVTQKGSGAGPHTVHH*PPASAE
Trigger: CTCTGCGGAGGCGGGCGGCCAGTGATGGACAGTATG...GGGCCCTGCACCAGAGCCCTTCTGTGTCACGGCGGGCTGTGCACCCATGCACAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp GGCTTCTGGCCAAGGCAGGACAGGGCGATGCCATTGCAGACCCTCCCACTCCTGCACCCCACTGGGTGGTaGGCTGCTCGGGGAGGTTCC +
Preference number: 4 (lower is better)
Translates to: GFWPRQDRAMPLQTLPLLHPTGW*AARGGS
Trigger: GGAACCTCCCCGAGCAGCCCACCACCCAGTGGGGTG...CAGGAGTGGGAGGGTCTGCAATGGCATCGCCCTGTCCTGCCTTGGCCAGAAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp GAGAAGGGTCTGGCGGCACCCAGGGTCACTAGAGTGCAGGTGCAGGCACCAGGACACCCCACTGGGTGGTaGGCTGCTCGGGGAGGTTCC +
Preference number: 4 (lower is better)
Translates to: EKGLAAPRVTRVQVQAPGHPTGW*AARGGS
Trigger: GGAACCTCCCCGAGCAGCCCACCACCCAGTGGGGTG...TCCTGGTGCCTGCACCTGCACTCTAGTGACCCTGGGTGCCGCCAGACCCTTCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp AAGAGAAGGGTCTGGCGGCACCCAGGGTCACTAGAGTGCAGGTGCAGGCACCAGCCGCACCCCACTGGGTaGTGGGCTGCTCGGGGAGGT +
Preference number: 4 (lower is better)
Translates to: KRRVWRHPGSLECRCRHQPHPTG*WAARGG
Trigger: ACCTCCCCGAGCAGCCCACCACCCAGTGGGGTGCGG...CTGGTGCCTGCACCTGCACTCTAGTGACCCTGGGTGCCGCCAGACCCTTCTCTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp CCAAGGCAGGACAGGGCGATGCCATTGCAGACCCTCCCACTCCTGCTGGGGTCTCCAACAGAGGCTGGGTaGGCGTCCGGGGACCCTGGT +
Preference number: 4 (lower is better)
Translates to: PRQDRAMPLQTLPLLLGSPTEAG*ASGDPG
Trigger: ACCAGGGTCCCCGGACGCCCACCCAGCCTCTGTTGG...AGACCCCAGCAGGAGTGGGAGGGTCTGCAATGGCATCGCCCTGTCCTGCCTTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp CATGGGTGCACAGCCCGCCGTGACACAGAAGGGCTCTGGTGCAGGGCCCAGAGGCTCCCAGGCACCGTGTaGACGCCAGCCACACTGAAC +
Preference number: 4 (lower is better)
Translates to: HGCTARRDTEGLWCRAQRLPGTV*TPATLN
Trigger: GTTCAGTGTGGCTGGCGTCCACACGGTGCCTGGGAG...CCTCTGGGCCCTGCACCAGAGCCCTTCTGTGTCACGGCGGGCTGTGCACCCATG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp GGCTTCTGGCCAAGGCAGGACAGGGCGATGCCATTGCAGACCCTCCCACTCCTGCTGGTGACGGGGAGGTaGCAGGGCTGCTCAGGCCAG +
Preference number: 4 (lower is better)
Translates to: GFWPRQDRAMPLQTLPLLLVTGR*QGCSGQ
Trigger: CTGGCCTGAGCAGCCCTGCCACCTCCCCGTCACCAG...CAGGAGTGGGAGGGTCTGCAATGGCATCGCCCTGTCCTGCCTTGGCCAGAAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp GTGTGCATGGGTGCACAGCCCGCCGTGACACAGAAGGGCTCTGGTGCAGGGCCCTGGTGGCAGCTGGCGTaGGGTCTGCAGCCAACGTCT +
Preference number: 4 (lower is better)
Translates to: VCMGAQPAVTQKGSGAGPWWQLA*GLQPTS
Trigger: AGACGTTGGCTGCAGACCCCACGCCAGCTGCCACCA...GGGCCCTGCACCAGAGCCCTTCTGTGTCACGGCGGGCTGTGCACCCATGCACAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp CTGGACAGCTGGTGGCAGCACGGGACTGAACCTGCTGGGGTCTGCGTCGCTGCGCTGGAGTGGAGGGGCTaGCCATGCATGCAAGGTGGG +
Preference number: 4 (lower is better)
Translates to: LDSWWQHGTEPAGVCVAALEWRG*PCMQGG
Trigger: CCCACCTTGCATGCATGGCCAGCCCCTCCACTCCAG...CGCAGCGACGCAGACCCCAGCAGGTTCAGTCCCGTGCTGCCACCAGCTGTCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp GTGTGCATGGGTGCACAGCCCGCCGTGACACAGAAGGGCTCTGGTGCAGGGCCCTCCTGGGTGATGACCTaGCGGCAGATCCCACAGGGC +
Preference number: 4 (lower is better)
Translates to: VCMGAQPAVTQKGSGAGPSWVMT*RQIPQG
Trigger: GCCCTGTGGGATCTGCCGCCAGGTCATCACCCAGGA...GGGCCCTGCACCAGAGCCCTTCTGTGTCACGGCGGGCTGTGCACCCATGCACAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp CTGGACAGCTGGTGGCAGCACGGGACTGAACCTGCTGGGGTCTGCGTCGCTGCGCAGGTGCAGCCTTCCTaGGTGATGACCTGGCGGCAG +
Preference number: 4 (lower is better)
Translates to: LDSWWQHGTEPAGVCVAAQVQPS*VMTWRQ
Trigger: CTGCCGCCAGGTCATCACCCAGGAAGGCTGCACCTG...CGCAGCGACGCAGACCCCAGCAGGTTCAGTCCCGTGCTGCCACCAGCTGTCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp GAGAAGGGTCTGGCGGCACCCAGGGTCACTAGAGTGCAGGTGCAGGCACCAGGATGGACCCGCCGCTCCTaGCGCAGAGTTCCGGGGTTG +
Preference number: 4 (lower is better)
Translates to: EKGLAAPRVTRVQVQAPGWTRRS*RRVPGL
Trigger: CAACCCCGGAACTCTGCGCCAGGAGCGGCGGGTCCA...TCCTGGTGCCTGCACCTGCACTCTAGTGACCCTGGGTGCCGCCAGACCCTTCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646520.1
CDS-3UTR TCA 90 bp CTGGACAGCTGGTGGCAGCACGGGACTGAACCTGCTGGGGTCTGCGTCGCTGCGCCAGCCACACTGAACTaGGCTCGAGCCTGGCTTTCC +
Preference number: 4 (lower is better)
Translates to: LDSWWQHGTEPAGVCVAAPATLN*ARAWLS
Trigger: GGAAAGCCAGGCTCGAGCTCAGTTCAGTGTGGCTGG...CGCAGCGACGCAGACCCCAGCAGGTTCAGTCCCGTGCTGCCACCAGCTGTCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp CCCAACTGTCCAGTGGACCTTAGGCCCTTTGGCCCAAGTGCAAGCCTTCTGCCCGTTCTGTGGCGCGCCTaGGGGCTCCCAGGCACCGTG +
Preference number: 4 (lower is better)
Translates to: PNCPVDLRPFGPSASLLPVLWRA*GLPGTV
Trigger: CACGGTGCCTGGGAGCCCTCAGGCGCGCCACAGAAC...GGGCAGAAGGCTTGCACTTGGGCCAAAGGGCCTAAGGTCCACTGGACAGTTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp TCTTCTCCCAGACCCTTTCCCATCCCAGCCCATGTTCAAGGCCAGACAGCGCTCGCCAGGTTGCCTTGGTaGGCCCCAGGGTGCCGGCCC +
Preference number: 4 (lower is better)
Translates to: SSPRPFPIPAHVQGQTALARLPW*APGCRP
Trigger: GGGCCGGCACCCTGGGGCTCACCAAGGCAACCTGGC...GAGCGCTGTCTGGCCTTGAACATGGGCTGGGATGGGAAAGGGTCTGGGAGAAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp CCCAACTGTCCAGTGGACCTTAGGCCCTTTGGCCCAAGTGCAAGCCTTCTGCCCGGCTGCGGAGTCTGGTaGCGGGGAGGTGGCAGGGCT +
Preference number: 4 (lower is better)
Translates to: PNCPVDLRPFGPSASLLPGCGVW*RGGGRA
Trigger: AGCCCTGCCACCTCCCCGTCACCAGACTCCGCAGCC...GGGCAGAAGGCTTGCACTTGGGCCAAAGGGCCTAAGGTCCACTGGACAGTTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp CTGGACAGCTGGTGGCAGCACGGGACTGAACCTGCTGGGGTCTGCGTCGCTGCGGCGCCTCGGAAGGAGTaGCTGTCGCGGATGATGAAG +
Preference number: 4 (lower is better)
Translates to: LDSWWQHGTEPAGVCVAAAPRKE*LSRMMK
Trigger: CTTCATCATCCGCGACAGTCACTCCTTCCGAGGCGC...CGCAGCGACGCAGACCCCAGCAGGTTCAGTCCCGTGCTGCCACCAGCTGTCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp CATGGGTGCACAGCCCGCCGTGACACAGAAGGGCTCTGGTGCAGGGCCCAGAGGTGGCCGGAGCCTCACTaGGCAGAAAGTAGGTTCCCC +
Preference number: 4 (lower is better)
Translates to: HGCTARRDTEGLWCRAQRWPEPH*AESRFP
Trigger: GGGGAACCTACTTTCTGCTCAGTGAGGCTCCGGCCA...CCTCTGGGCCCTGCACCAGAGCCCTTCTGTGTCACGGCGGGCTGTGCACCCATG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp CATGGGTGCACAGCCCGCCGTGACACAGAAGGGCTCTGGTGCAGGGCCCAGAGGAGCGACCGTGAAAGCTaGCCCCAGACTCAGTCCTGG +
Preference number: 4 (lower is better)
Translates to: HGCTARRDTEGLWCRAQRSDRES*PQTQSW
Trigger: CCAGGACTGAGTCTGGGGTCAGCTTTCACGGTCGCT...CCTCTGGGCCCTGCACCAGAGCCCTTCTGTGTCACGGCGGGCTGTGCACCCATG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp TCCAGCCTCTGCTTTCTGCTTGGCCGCTCAGCGCCCGGGGATGGAGGAGTGCTTGTGTCTTGGCCAATCTaGGGGTGCTGGGCCCCCTCC +
Preference number: 4 (lower is better)
Translates to: SSLCFLLGRSAPGDGGVLVSWPI*GCWAPS
Trigger: GGAGGGGGCCCAGCACCCTCAGATTGGCCAAGACAC...AAGCACTCCTCCATCCCCGGGCGCTGAGCGGCCAAGCAGAAAGCAGAGGCTGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000453356.1
CDS-3UTR GCA 90 bp GCAGACCCTCCCACTCCTGCTGGGGTCTTTGTAGAAGAGAAGGGTCTGGCGGCACACAGCCGAGCCCCCTaGTGGGCGGGACCTGAGGTG +
Preference number: 4 (lower is better)
Translates to: ADPPTPAGVFVEEKGLAAHSRAP*WAGPEV
Trigger: CACCTCAGGTCCCGCCCAGCAGGGGGCTCGGCTGTG...TGCCGCCAGACCCTTCTCTTCTACAAAGACCCCAGCAGGAGTGGGAGGGTCTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp GGCTTCTGGCCAAGGCAGGACAGGGCGATGCCATTGCAGACCCTCCCACTCCTGCACTGGGTGGTGGGCTaGTCGGGGAGGTTCCCTCCA +
Preference number: 4 (lower is better)
Translates to: GFWPRQDRAMPLQTLPLLHWVVG*SGRFPP
Trigger: TGGAGGGAACCTCCCCGAGCAGCCCACCACCCAGTG...CAGGAGTGGGAGGGTCTGCAATGGCATCGCCCTGTCCTGCCTTGGCCAGAAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp GGCTTCTGGCCAAGGCAGGACAGGGCGATGCCATTGCAGACCCTCCCACTCCTGGGGTGGTCGCTGCACTaGTCTGGGGGCTGGAGACAG +
Preference number: 4 (lower is better)
Translates to: GFWPRQDRAMPLQTLPLLGWSLH*SGGWRQ
Trigger: CTGTCTCCAGCCCCCAGAGCAGTGCAGCGACCACCC...CAGGAGTGGGAGGGTCTGCAATGGCATCGCCCTGTCCTGCCTTGGCCAGAAGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp GGCTTCTGGCCAAGGCAGGACAGGGCGATGCCATTGCAGACCCTCCCACTCCTGGACCGGAGGCCAGGTTaGCTTGGTGAGCCCCAGGGT +
Preference number: 4 (lower is better)
Translates to: GFWPRQDRAMPLQTLPLLDRRPG*LGEPQG
Trigger: ACCCTGGGGCTCACCAAGGCAACCTGGCCTCCGGTC...CAGGAGTGGGAGGGTCTGCAATGGCATCGCCCTGTCCTGCCTTGGCCAGAAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp CTGGACAGCTGGTGGCAGCACGGGACTGAACCTGCTGGGGTCTGCGTCGCTGCGCCAGGGTCACTAGAGTaGAGGTGCAGGCACCAGGAG +
Preference number: 4 (lower is better)
Translates to: LDSWWQHGTEPAGVCVAAPGSLE*RCRHQE
Trigger: CTCCTGGTGCCTGCACCTGCACTCTAGTGACCCTGG...CGCAGCGACGCAGACCCCAGCAGGTTCAGTCCCGTGCTGCCACCAGCTGTCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp GTGTGCATGGGTGCACAGCCCGCCGTGACACAGAAGGGCTCTGGTGCAGGGCCCGGGCCCCAGCCAGGCTaGTTGAAGGGTCTGATACAC +
Preference number: 4 (lower is better)
Translates to: VCMGAQPAVTQKGSGAGPGPQPG*LKGLIH
Trigger: GTGTATCAGACCCTTCAAGCAGCCTGGCTGGGGCCC...GGGCCCTGCACCAGAGCCCTTCTGTGTCACGGCGGGCTGTGCACCCATGCACAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp CTGGACAGCTGGTGGCAGCACGGGACTGAACCTGCTGGGGTCTGCGTCGCTGCGAGCTCCCGCTTCTCCTaGGGACTCAAGGCAGCAGTG +
Preference number: 4 (lower is better)
Translates to: LDSWWQHGTEPAGVCVAASSRFS*GLKAAV
Trigger: CACTGCTGCCTTGAGTCCCCAGGAGAAGCGGGAGCT...CGCAGCGACGCAGACCCCAGCAGGTTCAGTCCCGTGCTGCCACCAGCTGTCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp CATGGGTGCACAGCCCGCCGTGACACAGAAGGGCTCTGGTGCAGGGCCCAGAGGCAGGGAGACTGGGGATaGGGGTCTCTGCCAATGGCT +
Preference number: 4 (lower is better)
Translates to: HGCTARRDTEGLWCRAQRQGDWG*GSLPMA
Trigger: AGCCATTGGCAGAGACCCCCATCCCCAGTCTCCCTG...CCTCTGGGCCCTGCACCAGAGCCCTTCTGTGTCACGGCGGGCTGTGCACCCATG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp CATGGGTGCACAGCCCGCCGTGACACAGAAGGGCTCTGGTGCAGGGCCCAGAGGTGGGACTCCCCGGGGTaGTGGCCACTTTGTTGTGGA +
Preference number: 4 (lower is better)
Translates to: HGCTARRDTEGLWCRAQRWDSPG*WPLCCG
Trigger: TCCACAACAAAGTGGCCACCACCCCGGGGAGTCCCA...CCTCTGGGCCCTGCACCAGAGCCCTTCTGTGTCACGGCGGGCTGTGCACCCATG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp CCAAGGCAGGACAGGGCGATGCCATTGCAGACCCTCCCACTCCTGCTGGGGTCTTGCCCCCACTGGGACTaGACATGCCGCTGGCGACAG +
Preference number: 4 (lower is better)
Translates to: PRQDRAMPLQTLPLLLGSCPHWD*TCRWRQ
Trigger: CTGTCGCCAGCGGCATGTCCAGTCCCAGTGGGGGCA...AGACCCCAGCAGGAGTGGGAGGGTCTGCAATGGCATCGCCCTGTCCTGCCTTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp CCAAGGCAGGACAGGGCGATGCCATTGCAGACCCTCCCACTCCTGCTGGGGTCTAAGGCCCCCGGCTCCTaGTCCTTGAGGAGCGCGATG +
Preference number: 4 (lower is better)
Translates to: PRQDRAMPLQTLPLLLGSKAPGS*SLRSAM
Trigger: CATCGCGCTCCTCAAGGACCAGGAGCCGGGGGCCTT...AGACCCCAGCAGGAGTGGGAGGGTCTGCAATGGCATCGCCCTGTCCTGCCTTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp GTGTGCATGGGTGCACAGCCCGCCGTGACACAGAAGGGCTCTGGTGCAGGGCCCCTGAGCCACATGCCTTaGGGAAGACACCCCGAGCTC +
Preference number: 4 (lower is better)
Translates to: VCMGAQPAVTQKGSGAGPLSHMP*GRHPEL
Trigger: GAGCTCGGGGTGTCTTCCCCAAGGCATGTGGCTCAG...GGGCCCTGCACCAGAGCCCTTCTGTGTCACGGCGGGCTGTGCACCCATGCACAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp CTGGACAGCTGGTGGCAGCACGGGACTGAACCTGCTGGGGTCTGCGTCGCTGCGCAGCTGGACAGCTGGTaGCAGCACGGGACTGAACCT +
Preference number: 4 (lower is better)
Translates to: LDSWWQHGTEPAGVCVAAQLDSW*QHGTEP
Trigger: AGGTTCAGTCCCGTGCTGCCACCAGCTGTCCAGCTG...CGCAGCGACGCAGACCCCAGCAGGTTCAGTCCCGTGCTGCCACCAGCTGTCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp CTGGACAGCTGGTGGCAGCACGGGACTGAACCTGCTGGGGTCTGCGTCGCTGCGACCCAGCTGGACAGCTaGTGGCAGCACGGGACTGAA +
Preference number: 4 (lower is better)
Translates to: LDSWWQHGTEPAGVCVAATQLDS*WQHGTE
Trigger: TTCAGTCCCGTGCTGCCACCAGCTGTCCAGCTGGGT...CGCAGCGACGCAGACCCCAGCAGGTTCAGTCCCGTGCTGCCACCAGCTGTCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp AAGAGAAGGGTCTGGCGGCACCCAGGGTCACTAGAGTGCAGGTGCAGGCACCAGGCTGGACACTCGGGGTaGCCCTGGTGGAGCCGTTGT +
Preference number: 4 (lower is better)
Translates to: KRRVWRHPGSLECRCRHQAGHSG*PWWSRC
Trigger: ACAACGGCTCCACCAGGGTCACCCCGAGTGTCCAGC...CTGGTGCCTGCACCTGCACTCTAGTGACCCTGGGTGCCGCCAGACCCTTCTCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp CGATGCCATTGCAGACCCTCCCACTCCTGCTGGGGTCTTTGTAGAAGAGAAGGGGCCAGGTTGCCTTGGTaGGCCCCAGGGTGCCGGCCC +
Preference number: 4 (lower is better)
Translates to: RCHCRPSHSCWGLCRREGARLPW*APGCRP
Trigger: GGGCCGGCACCCTGGGGCTCACCAAGGCAACCTGGC...CCCTTCTCTTCTACAAAGACCCCAGCAGGAGTGGGAGGGTCTGCAATGGCATCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp GTGTGCATGGGTGCACAGCCCGCCGTGACACAGAAGGGCTCTGGTGCAGGGCCCGGGTTTGCTAGGGAATaGGGAGAGGGGGAAACCCAG +
Preference number: 4 (lower is better)
Translates to: VCMGAQPAVTQKGSGAGPGFARE*GEGETQ
Trigger: CTGGGTTTCCCCCTCTCCTCATTCCCTAGCAAACCC...GGGCCCTGCACCAGAGCCCTTCTGTGTCACGGCGGGCTGTGCACCCATGCACAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp CATGGGTGCACAGCCCGCCGTGACACAGAAGGGCTCTGGTGCAGGGCCCAGAGGGGGAAGGATGCTGGGTaGTCTTGTTTCCCCCGCAGA +
Preference number: 4 (lower is better)
Translates to: HGCTARRDTEGLWCRAQRGKDAG*SCFPRR
Trigger: TCTGCGGGGGAAACAAGATCACCCAGCATCCTTCCC...CCTCTGGGCCCTGCACCAGAGCCCTTCTGTGTCACGGCGGGCTGTGCACCCATG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp GAGAAGGGTCTGGCGGCACCCAGGGTCACTAGAGTGCAGGTGCAGGCACCAGGACCATCTAGTGGCCCCTaGGTGTGTCCCACCACCTCC +
Preference number: 4 (lower is better)
Translates to: EKGLAAPRVTRVQVQAPGPSSGP*VCPTTS
Trigger: GGAGGTGGTGGGACACACGCAGGGGCCACTAGATGG...TCCTGGTGCCTGCACCTGCACTCTAGTGACCCTGGGTGCCGCCAGACCCTTCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp CTGGACAGCTGGTGGCAGCACGGGACTGAACCTGCTGGGGTCTGCGTCGCTGCGGTAACTCCTGTGGGGTaGAACAGGATGTCCGCTGGG +
Preference number: 4 (lower is better)
Translates to: LDSWWQHGTEPAGVCVAAVTPVG*NRMSAG
Trigger: CCCAGCGGACATCCTGTTGCACCCCACAGGAGTTAC...CGCAGCGACGCAGACCCCAGCAGGTTCAGTCCCGTGCTGCCACCAGCTGTCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000171887.8
CDS-3UTR GCA 90 bp AAGAGAAGGGTCTGGCGGCACCCAGGGTCACTAGAGTGCAGGTGCAGGCACCAGGGGTGGTCGCTGCACTaGTCTGGGGGCTGGAGACAG +
Preference number: 4 (lower is better)
Translates to: KRRVWRHPGSLECRCRHQGWSLH*SGGWRQ
Trigger: CTGTCTCCAGCCCCCAGAGCAGTGCAGCGACCACCC...CTGGTGCCTGCACCTGCACTCTAGTGACCCTGGGTGCCGCCAGACCCTTCTCTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp GAGAAGGGTCTGGCGGCACCCAGGGTCACTAGAGTGCAGGTGCAGGCACCAGGACATAGTTGGGGAGGCTaGCTGCCCGGTCTCCCACTG +
Preference number: 4 (lower is better)
Translates to: EKGLAAPRVTRVQVQAPGHSWGG*LPGLPL
Trigger: CAGTGGGAGACCGGGCAGGCAGCCTCCCCAACTATG...TCCTGGTGCCTGCACCTGCACTCTAGTGACCCTGGGTGCCGCCAGACCCTTCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp AAGAGAAGGGTCTGGCGGCACCCAGGGTCACTAGAGTGCAGGTGCAGGCACCAGGGGAGAAGGAGACGGTaGTGCCCCCACTGGGACTGG +
Preference number: 4 (lower is better)
Translates to: KRRVWRHPGSLECRCRHQGRRRR*CPHWDW
Trigger: CCAGTCCCAGTGGGGGCAGCACCGTCTCCTTCTCCC...CTGGTGCCTGCACCTGCACTCTAGTGACCCTGGGTGCCGCCAGACCCTTCTCTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp GTGTGCATGGGTGCACAGCCCGCCGTGACACAGAAGGGCTCTGGTGCAGGGCCCGCTGAGGTCAGAGGGTaGCTGCAAAAGCCAGACCCT +
Preference number: 4 (lower is better)
Translates to: VCMGAQPAVTQKGSGAGPAEVRG*LQKPDP
Trigger: AGGGTCTGGCTTTTGCAGGCACCCTCTGACCTCAGC...GGGCCCTGCACCAGAGCCCTTCTGTGTCACGGCGGGCTGTGCACCCATGCACAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp GCAGACCCTCCCACTCCTGCTGGGGTCTTTGTAGAAGAGAAGGGTCTGGCGGCAGGCTGGAGGTGGGGCTaGACACTCGGGGTGACCCTG +
Preference number: 4 (lower is better)
Translates to: ADPPTPAGVFVEEKGLAAGWRWG*TLGVTL
Trigger: CAGGGTCACCCCGAGTGTCCAGCCCCACCTCCAGCC...TGCCGCCAGACCCTTCTCTTCTACAAAGACCCCAGCAGGAGTGGGAGGGTCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp CTGGACAGCTGGTGGCAGCACGGGACTGAACCTGCTGGGGTCTGCGTCGCTGCGCGGTCTTGTCGGTCTTaGTGGAGGCTGTGGAGTTGC +
Preference number: 4 (lower is better)
Translates to: LDSWWQHGTEPAGVCVAARSCRS*WRLWSC
Trigger: GCAACTCCACAGCCTCCACCAAGACCGACAAGACCG...CGCAGCGACGCAGACCCCAGCAGGTTCAGTCCCGTGCTGCCACCAGCTGTCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp GTAGAAGAGAAGGGTCTGGCGGCACCCAGGGTCACTAGAGTGCAGGTGCAGGCACTGCTGGCGTGGAGGTaGGCGAGGCTGCTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: VEEKGLAAPRVTRVQVQALLAWR*ARLLLL
Trigger: CAGCAGCAGCAGCCTCGCCCACCTCCACGCCAGCAG...TGCCTGCACCTGCACTCTAGTGACCCTGGGTGCCGCCAGACCCTTCTCTTCTAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp AAGAGAAGGGTCTGGCGGCACCCAGGGTCACTAGAGTGCAGGTGCAGGCACCAGAGAGGCCCGTGGGGCTaGCTCAGGGGTTCCCAACGA +
Preference number: 4 (lower is better)
Translates to: KRRVWRHPGSLECRCRHQRGPWG*LRGSQR
Trigger: TCGTTGGGAACCCCTGAGCCAGCCCCACGGGCCTCT...CTGGTGCCTGCACCTGCACTCTAGTGACCCTGGGTGCCGCCAGACCCTTCTCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp GCAGACCCTCCCACTCCTGCTGGGGTCTTTGTAGAAGAGAAGGGTCTGGCGGCACCTCCGCAGAGGGGCTaGGGGCTCTGCAGGCTGCTT +
Preference number: 4 (lower is better)
Translates to: ADPPTPAGVFVEEKGLAAPPQRG*GLCRLL
Trigger: AAGCAGCCTGCAGAGCCCCCAGCCCCTCTGCGGAGG...TGCCGCCAGACCCTTCTCTTCTACAAAGACCCCAGCAGGAGTGGGAGGGTCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp GAGAAGGGTCTGGCGGCACCCAGGGTCACTAGAGTGCAGGTGCAGGCACCAGGACATACTGTCCATCACTaGCCGCCCGCCTCCGCAGAG +
Preference number: 4 (lower is better)
Translates to: EKGLAAPRVTRVQVQAPGHTVHH*PPASAE
Trigger: CTCTGCGGAGGCGGGCGGCCAGTGATGGACAGTATG...TCCTGGTGCCTGCACCTGCACTCTAGTGACCCTGGGTGCCGCCAGACCCTTCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp GTAGAAGAGAAGGGTCTGGCGGCACCCAGGGTCACTAGAGTGCAGGTGCAGGCACACCCCACTGGGTGGTaGGCTGCTCGGGGAGGTTCC +
Preference number: 4 (lower is better)
Translates to: VEEKGLAAPRVTRVQVQAHPTGW*AARGGS
Trigger: GGAACCTCCCCGAGCAGCCCACCACCCAGTGGGGTG...TGCCTGCACCTGCACTCTAGTGACCCTGGGTGCCGCCAGACCCTTCTCTTCTAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp GCTATCGCTGAGACTCCACCAATTGGTTGGCCTACAGGCCTCACCTCCCGACTCCCGCACCCCACTGGGTaGTGGGCTGCTCGGGGAGGT +
Preference number: 4 (lower is better)
Translates to: AIAETPPIGWPTGLTSRLPHPTG*WAARGG
Trigger: ACCTCCCCGAGCAGCCCACCACCCAGTGGGGTGCGG...GAGTCGGGAGGTGAGGCCTGTAGGCCAACCAATTGGTGGAGTCTCAGCGATAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp CGATGCCATTGCAGACCCTCCCACTCCTGCTGGGGTCTTTGTAGAAGAGAAGGGGGGACCGCACCCCACTaGGTGGTGGGCTGCTCGGGG +
Preference number: 4 (lower is better)
Translates to: RCHCRPSHSCWGLCRREGGTAPH*VVGCSG
Trigger: CCCCGAGCAGCCCACCACCCAGTGGGGTGCGGTCCC...CCCTTCTCTTCTACAAAGACCCCAGCAGGAGTGGGAGGGTCTGCAATGGCATCG
64% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp GTGAGGAAGGGAAAAGCGACCGTGAAAGCTGACCCCAGACTCAGTCCTGGGCCCGGCGTCCGGGGACCCTaGTCACTGCTCTCTCCCGAC +
Preference number: 4 (lower is better)
Translates to: VRKGKATVKADPRLSPGPGVRGP*SLLSPD
Trigger: GTCGGGAGAGAGCAGTGACCAGGGTCCCCGGACGCC...GGGCCCAGGACTGAGTCTGGGGTCAGCTTTCACGGTCGCTTTTCCCTTCCTCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp ATTGGTTGGCCTACAGGCCTCACCTCCCGACTCCCCTCACTGCTGGGCGACATTGACTCCAACAGAGGCTaGGTGGGCGTCCGGGGACCC +
Preference number: 4 (lower is better)
Translates to: IGWPTGLTSRLPSLLGDIDSNRG*VGVRGP
Trigger: GGGTCCCCGGACGCCCACCCAGCCTCTGTTGGAGTC...AATGTCGCCCAGCAGTGAGGGGAGTCGGGAGGTGAGGCCTGTAGGCCAACCAAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp CCAAGGCAGGACAGGGCGATGCCATTGCAGACCCTCCCACTCCTGCTGGGGTCTGACTCCCCGGGGTGGTaGCCACTTTGTTGTGGAGGC +
Preference number: 4 (lower is better)
Translates to: PRQDRAMPLQTLPLLLGSDSPGW*PLCCGG
Trigger: GCCTCCACAACAAAGTGGCCACCACCCCGGGGAGTC...AGACCCCAGCAGGAGTGGGAGGGTCTGCAATGGCATCGCCCTGTCCTGCCTTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp ATTGGTTGGCCTACAGGCCTCACCTCCCGACTCCCCTCACTGCTGGGCGACATTCTGGTGACGGGGAGGTaGCAGGGCTGCTCAGGCCAG +
Preference number: 4 (lower is better)
Translates to: IGWPTGLTSRLPSLLGDILVTGR*QGCSGQ
Trigger: CTGGCCTGAGCAGCCCTGCCACCTCCCCGTCACCAG...AATGTCGCCCAGCAGTGAGGGGAGTCGGGAGGTGAGGCCTGTAGGCCAACCAAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp ATTGGTTGGCCTACAGGCCTCACCTCCCGACTCCCCTCACTGCTGGGCGACATTCGGTGCTGCCCCCACTaGGACTGGACATGCCGCTGG +
Preference number: 4 (lower is better)
Translates to: IGWPTGLTSRLPSLLGDIRCCPH*DWTCRW
Trigger: CCAGCGGCATGTCCAGTCCCAGTGGGGGCAGCACCG...AATGTCGCCCAGCAGTGAGGGGAGTCGGGAGGTGAGGCCTGTAGGCCAACCAAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp CCAAGGCAGGACAGGGCGATGCCATTGCAGACCCTCCCACTCCTGCTGGGGTCTGCGAAGACACCTTCATaGCCAGCCCGTACGCGCCTC +
Preference number: 4 (lower is better)
Translates to: PRQDRAMPLQTLPLLLGSAKTPS*PARTRL
Trigger: GAGGCGCGTACGGGCTGGCCATGAAGGTGTCTTCGC...AGACCCCAGCAGGAGTGGGAGGGTCTGCAATGGCATCGCCCTGTCCTGCCTTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp GTGTGCATGGGTGCACAGCCCGCCGTGACACAGAAGGGCTCTGGTGCAGGGCCCGTGTGGGGGCAGGATTaGGTGTCTGCCTTGACTCAC +
Preference number: 4 (lower is better)
Translates to: VCMGAQPAVTQKGSGAGPVWGQD*VSALTH
Trigger: GTGAGTCAAGGCAGACACCCAATCCTGCCCCCACAC...GGGCCCTGCACCAGAGCCCTTCTGTGTCACGGCGGGCTGTGCACCCATGCACAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp GCAGACCCTCCCACTCCTGCTGGGGTCTTTGTAGAAGAGAAGGGTCTGGCGGCACTGCTGGGCGGGACCTaGGGTGCTGGGTGTGGTACA +
Preference number: 4 (lower is better)
Translates to: ADPPTPAGVFVEEKGLAALLGGT*GAGCGT
Trigger: TGTACCACACCCAGCACCTCAGGTCCCGCCCAGCAG...TGCCGCCAGACCCTTCTCTTCTACAAAGACCCCAGCAGGAGTGGGAGGGTCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp CCAAGGCAGGACAGGGCGATGCCATTGCAGACCCTCCCACTCCTGCTGGGGTCTGCCCCACCATTGACATaGACCTGGGCTGGGACAACG +
Preference number: 4 (lower is better)
Translates to: PRQDRAMPLQTLPLLLGSAPPLT*TWAGTT
Trigger: CGTTGTCCCAGCCCAGGTTCATGTCAATGGTGGGGC...AGACCCCAGCAGGAGTGGGAGGGTCTGCAATGGCATCGCCCTGTCCTGCCTTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp GTAGAAGAGAAGGGTCTGGCGGCACCCAGGGTCACTAGAGTGCAGGTGCAGGCATTGGGCTCAGAGTCCTaGGCTCGGGGTCCAGCCACC +
Preference number: 4 (lower is better)
Translates to: VEEKGLAAPRVTRVQVQALGSES*ARGPAT
Trigger: GGTGGCTGGACCCCGAGCTCAGGACTCTGAGCCCAA...TGCCTGCACCTGCACTCTAGTGACCCTGGGTGCCGCCAGACCCTTCTCTTCTAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp GTAGAAGAGAAGGGTCTGGCGGCACCCAGGGTCACTAGAGTGCAGGTGCAGGCACAGCCATGCTGGGATTaGTGGCCCGCCAGCCGAAGC +
Preference number: 4 (lower is better)
Translates to: VEEKGLAAPRVTRVQVQAQPCWD*WPASRS
Trigger: GCTTCGGCTGGCGGGCCATCAATCCCAGCATGGCTG...TGCCTGCACCTGCACTCTAGTGACCCTGGGTGCCGCCAGACCCTTCTCTTCTAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp CATGGGTGCACAGCCCGCCGTGACACAGAAGGGCTCTGGTGCAGGGCCCAGAGGGGACCCATCATCTGGTaGTGGCTCAAACTGGGACTG +
Preference number: 4 (lower is better)
Translates to: HGCTARRDTEGLWCRAQRGPIIW*WLKLGL
Trigger: CAGTCCCAGTTTGAGCCATCACCAGATGATGGGTCC...CCTCTGGGCCCTGCACCAGAGCCCTTCTGTGTCACGGCGGGCTGTGCACCCATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp GCAGACCCTCCCACTCCTGCTGGGGTCTTTGTAGAAGAGAAGGGTCTGGCGGCATCAGCCGAGTCATGCTaGCCCCGAGAGTGGGCGCCT +
Preference number: 4 (lower is better)
Translates to: ADPPTPAGVFVEEKGLAASAESC*PREWAP
Trigger: AGGCGCCCACTCTCGGGGTCAGCATGACTCGGCTGA...TGCCGCCAGACCCTTCTCTTCTACAAAGACCCCAGCAGGAGTGGGAGGGTCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646520.1
CDS-3UTR GCA 90 bp GTGTGCATGGGTGCACAGCCCGCCGTGACACAGAAGGGCTCTGGTGCAGGGCCCCCACCTCACGGAGGTTaGTCCGGAAGTTCTCCTCAT +
Preference number: 4 (lower is better)
Translates to: VCMGAQPAVTQKGSGAGPPPHGG*SGSSPH
Trigger: ATGAGGAGAACTTCCGGAGCAACCTCCGTGAGGTGG...GGGCCCTGCACCAGAGCCCTTCTGTGTCACGGCGGGCTGTGCACCCATGCACAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp AAGAGAAGGGTCTGGCGGCACCCAGGGTCACTAGAGTGCAGGTGCAGGCACCAGCCATCTAGTGGCCCCTaGGTGTGTCCCACCACCTCC +
Preference number: 4 (lower is better)
Translates to: KRRVWRHPGSLECRCRHQPSSGP*VCPTTS
Trigger: GGAGGTGGTGGGACACACGCAGGGGCCACTAGATGG...CTGGTGCCTGCACCTGCACTCTAGTGACCCTGGGTGCCGCCAGACCCTTCTCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp GTGAGGAAGGGAAAAGCGACCGTGAAAGCTGACCCCAGACTCAGTCCTGGGCCCGGGCGGGACCTGAGGTaGTGGGTGTGGTACATGGCG +
Preference number: 4 (lower is better)
Translates to: VRKGKATVKADPRLSPGPGRDLR*WVWYMA
Trigger: CGCCATGTACCACACCCAGCACCTCAGGTCCCGCCC...GGGCCCAGGACTGAGTCTGGGGTCAGCTTTCACGGTCGCTTTTCCCTTCCTCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp CATGGGTGCACAGCCCGCCGTGACACAGAAGGGCTCTGGTGCAGGGCCCAGAGGAAGAGAGTGTGCCCATaGTGCCCGCACTGTGACCAT +
Preference number: 4 (lower is better)
Translates to: HGCTARRDTEGLWCRAQRKRVCP*CPHCDH
Trigger: ATGGTCACAGTGCGGGCAGCATGGGCACACTCTCTT...CCTCTGGGCCCTGCACCAGAGCCCTTCTGTGTCACGGCGGGCTGTGCACCCATG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp GAGAAGGGTCTGGCGGCACCCAGGGTCACTAGAGTGCAGGTGCAGGCACCAGGAAAGTGGGCTCTTTCCTaGTGGCGTGGAGGTGGGCGA +
Preference number: 4 (lower is better)
Translates to: EKGLAAPRVTRVQVQAPGKWALS*WRGGGR
Trigger: TCGCCCACCTCCACGCCAGCAGGAAAGAGCCCACTT...TCCTGGTGCCTGCACCTGCACTCTAGTGACCCTGGGTGCCGCCAGACCCTTCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp ATTGGTTGGCCTACAGGCCTCACCTCCCGACTCCCCTCACTGCTGGGCGACATTGGGGATGGGGGTCTCTaGCAATGGCTGAGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: IGWPTGLTSRLPSLLGDIGDGGL*QWLRAG
Trigger: CCCAGCCCTCAGCCATTGGCAGAGACCCCCATCCCC...AATGTCGCCCAGCAGTGAGGGGAGTCGGGAGGTGAGGCCTGTAGGCCAACCAAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp GTGAGGAAGGGAAAAGCGACCGTGAAAGCTGACCCCAGACTCAGTCCTGGGCCCCTCCTGCTGGGAGGCTaGTCGCGGGAACTCAGGGAG +
Preference number: 4 (lower is better)
Translates to: VRKGKATVKADPRLSPGPLLLGG*SRELRE
Trigger: CTCCCTGAGTTCCCGCGAGCAGCCTCCCAGCAGGAG...GGGCCCAGGACTGAGTCTGGGGTCAGCTTTCACGGTCGCTTTTCCCTTCCTCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp GCAGACCCTCCCACTCCTGCTGGGGTCTTTGTAGAAGAGAAGGGTCTGGCGGCAGGGGGCTCTGCAGGCTaGTTCTCCCGAGCCTGTACC +
Preference number: 4 (lower is better)
Translates to: ADPPTPAGVFVEEKGLAAGGSAG*FSRACT
Trigger: GGTACAGGCTCGGGAGAAGCAGCCTGCAGAGCCCCC...TGCCGCCAGACCCTTCTCTTCTACAAAGACCCCAGCAGGAGTGGGAGGGTCTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp GCAGACCCTCCCACTCCTGCTGGGGTCTTTGTAGAAGAGAAGGGTCTGGCGGCACACTGGGTGGTGGGCTaGTCGGGGAGGTTCCCTCCA +
Preference number: 4 (lower is better)
Translates to: ADPPTPAGVFVEEKGLAAHWVVG*SGRFPP
Trigger: TGGAGGGAACCTCCCCGAGCAGCCCACCACCCAGTG...TGCCGCCAGACCCTTCTCTTCTACAAAGACCCCAGCAGGAGTGGGAGGGTCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp GGCTTCTGGCCAAGGCAGGACAGGGCGATGCCATTGCAGACCCTCCCACTCCTGGGCTGCTGTAGCTACTaGCCACAGTCGGGAGAGGAG +
Preference number: 4 (lower is better)
Translates to: GFWPRQDRAMPLQTLPLLGCCSY*PQSGEE
Trigger: CTCCTCTCCCGACTGTGGGCAGTAGCTACAGCAGCC...CAGGAGTGGGAGGGTCTGCAATGGCATCGCCCTGTCCTGCCTTGGCCAGAAGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp GTGAGGAAGGGAAAAGCGACCGTGAAAGCTGACCCCAGACTCAGTCCTGGGCCCGGGAGAAGGAGACGGTaGTGCCCCCACTGGGACTGG +
Preference number: 4 (lower is better)
Translates to: VRKGKATVKADPRLSPGPGRRRR*CPHWDW
Trigger: CCAGTCCCAGTGGGGGCAGCACCGTCTCCTTCTCCC...GGGCCCAGGACTGAGTCTGGGGTCAGCTTTCACGGTCGCTTTTCCCTTCCTCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp AAGAGAAGGGTCTGGCGGCACCCAGGGTCACTAGAGTGCAGGTGCAGGCACCAGGTAGGCGATGTGGTGTaGAGGCAGCAGGCCCAGGAG +
Preference number: 4 (lower is better)
Translates to: KRRVWRHPGSLECRCRHQVGDVV*RQQAQE
Trigger: CTCCTGGGCCTGCTGCCTGCACACCACATCGCCTAC...CTGGTGCCTGCACCTGCACTCTAGTGACCCTGGGTGCCGCCAGACCCTTCTCTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp GAGAAGGGTCTGGCGGCACCCAGGGTCACTAGAGTGCAGGTGCAGGCACCAGGAGAACCTGCTGGGGTCTaGGTCGCTGCGATGTCCATG +
Preference number: 4 (lower is better)
Translates to: EKGLAAPRVTRVQVQAPGEPAGV*VAAMSM
Trigger: CATGGACATCGCAGCGACGCAGACCCCAGCAGGTTC...TCCTGGTGCCTGCACCTGCACTCTAGTGACCCTGGGTGCCGCCAGACCCTTCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp CATGGGTGCACAGCCCGCCGTGACACAGAAGGGCTCTGGTGCAGGGCCCAGAGGAGAAGCTGCAGACTTTaGAGGTGCAGCCTTCCTGGG +
Preference number: 4 (lower is better)
Translates to: HGCTARRDTEGLWCRAQRRSCRL*RCSLPG
Trigger: CCCAGGAAGGCTGCACCTGCAAAGTCTGCAGCTTCT...CCTCTGGGCCCTGCACCAGAGCCCTTCTGTGTCACGGCGGGCTGTGCACCCATG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp GCTCCAGCCTCTGCTTTCTGCTTGGCCGCTCAGCGCCCGGGGATGGAGGAGTGCGATGACGTCTCGGGCTaGGCTTCGGAACTTCTTGTG +
Preference number: 4 (lower is better)
Translates to: APASAFCLAAQRPGMEECDDVSG*ASELLV
Trigger: CACAAGAAGTTCCGAAGCCCAGCCCGAGACGTCATC...GCACTCCTCCATCCCCGGGCGCTGAGCGGCCAAGCAGAAAGCAGAGGCTGGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453356.1
CDS-3UTR CCA 90 bp GAGAAGGGTCTGGCGGCACCCAGGGTCACTAGAGTGCAGGTGCAGGCACCAGGAAGCTCCCGCTTCTCCTaGGGACTCAAGGCAGCAGTG +
Preference number: 4 (lower is better)
Translates to: EKGLAAPRVTRVQVQAPGSSRFS*GLKAAV
Trigger: CACTGCTGCCTTGAGTCCCCAGGAGAAGCGGGAGCT...TCCTGGTGCCTGCACCTGCACTCTAGTGACCCTGGGTGCCGCCAGACCCTTCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp CGATGCCATTGCAGACCCTCCCACTCCTGCTGGGGTCTTTGTAGAAGAGAAGGGAGCCGAGCCCCCTGCTaGGCGGGACCTGAGGTGCTG +
Preference number: 4 (lower is better)
Translates to: RCHCRPSHSCWGLCRREGSRAPC*AGPEVL
Trigger: CAGCACCTCAGGTCCCGCCCAGCAGGGGGCTCGGCT...CCCTTCTCTTCTACAAAGACCCCAGCAGGAGTGGGAGGGTCTGCAATGGCATCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp AAGAGAAGGGTCTGGCGGCACCCAGGGTCACTAGAGTGCAGGTGCAGGCACCAGTGGGCTGGGACAACGTaGCGTCCAGAGGAGGGCACA +
Preference number: 4 (lower is better)
Translates to: KRRVWRHPGSLECRCRHQWAGTT*RPEEGT
Trigger: TGTGCCCTCCTCTGGACGCCACGTTGTCCCAGCCCA...CTGGTGCCTGCACCTGCACTCTAGTGACCCTGGGTGCCGCCAGACCCTTCTCTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp GTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCATGGGTCCCCTCCCCACAAGCAGGCCCCGCCCGGCTaGCAGACTCGTAGGGGTAGC +
Preference number: 4 (lower is better)
Translates to: VLLLGSRVVRIHGSPPHKQAPPG*QTRRGS
Trigger: GCTACCCCTACGAGTCTGCCAGCCGGGCGGGGCCTG...CTTGTGGGGAGGGGACCCATGAATCCTGACCACTCTTGAACCCAGAAGGAGGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp CCCAACTGTCCAGTGGACCTTAGGCCCTTTGGCCCAAGTGCAAGCCTTCTGCCCAGTAGGAGGGCCGCATaGGGGCCGTGTGGCCAGCAT +
Preference number: 4 (lower is better)
Translates to: PNCPVDLRPFGPSASLLPSRRAA*GPCGQH
Trigger: ATGCTGGCCACACGGCCCCCATGCGGCCCTCCTACT...GGGCAGAAGGCTTGCACTTGGGCCAAAGGGCCTAAGGTCCACTGGACAGTTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp GTAGAAGAGAAGGGTCTGGCGGCACCCAGGGTCACTAGAGTGCAGGTGCAGGCAAGTAGGAGGGCCGCATaGGGGCCGTGTGGCCAGCAT +
Preference number: 4 (lower is better)
Translates to: VEEKGLAAPRVTRVQVQASRRAA*GPCGQH
Trigger: ATGCTGGCCACACGGCCCCCATGCGGCCCTCCTACT...TGCCTGCACCTGCACTCTAGTGACCCTGGGTGCCGCCAGACCCTTCTCTTCTAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp CCAAGGCAGGACAGGGCGATGCCATTGCAGACCCTCCCACTCCTGCTGGGGTCTCAGGGAGACTGGGGATaGGGGTCTCTGCCAATGGCT +
Preference number: 4 (lower is better)
Translates to: PRQDRAMPLQTLPLLLGSQGDWG*GSLPMA
Trigger: AGCCATTGGCAGAGACCCCCATCCCCAGTCTCCCTG...AGACCCCAGCAGGAGTGGGAGGGTCTGCAATGGCATCGCCCTGTCCTGCCTTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp GAGAAGGGTCTGGCGGCACCCAGGGTCACTAGAGTGCAGGTGCAGGCACCAGGAGGAACTCAGGGAGACTaGGGATGGGGGTCTCTGCCA +
Preference number: 4 (lower is better)
Translates to: EKGLAAPRVTRVQVQAPGGTQGD*GWGSLP
Trigger: TGGCAGAGACCCCCATCCCCAGTCTCCCTGAGTTCC...TCCTGGTGCCTGCACCTGCACTCTAGTGACCCTGGGTGCCGCCAGACCCTTCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp CCCAACTGTCCAGTGGACCTTAGGCCCTTTGGCCCAAGTGCAAGCCTTCTGCCCGGCAGCAGCGGAGGCTaGCTCCAGGTCCAGCATCAG +
Preference number: 4 (lower is better)
Translates to: PNCPVDLRPFGPSASLLPGSSGG*LQVQHQ
Trigger: CTGATGCTGGACCTGGAGCCAGCCTCCGCTGCTGCC...GGGCAGAAGGCTTGCACTTGGGCCAAAGGGCCTAAGGTCCACTGGACAGTTGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp GCAGACCCTCCCACTCCTGCTGGGGTCTTTGTAGAAGAGAAGGGTCTGGCGGCAGGCAGCAGCGGAGGCTaGCTCCAGGTCCAGCATCAG +
Preference number: 4 (lower is better)
Translates to: ADPPTPAGVFVEEKGLAAGSSGG*LQVQHQ
Trigger: CTGATGCTGGACCTGGAGCCAGCCTCCGCTGCTGCC...TGCCGCCAGACCCTTCTCTTCTACAAAGACCCCAGCAGGAGTGGGAGGGTCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp ATGCGCACACACGTCCTGTGTTACCACTGGCCAAGGAAACGCGAGTCTCAGGATGGGACCGCACCCCACTaGGTGGTGGGCTGCTCGGGG +
Preference number: 4 (lower is better)
Translates to: MRTHVLCYHWPRKRESQDGTAPH*VVGCSG
Trigger: CCCCGAGCAGCCCACCACCCAGTGGGGTGCGGTCCC...ATCCTGAGACTCGCGTTTCCTTGGCCAGTGGTAACACAGGACGTGTGTGCGCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp CATGGGTGCACAGCCCGCCGTGACACAGAAGGGCTCTGGTGCAGGGCCCAGAGGATGGAAGCCAGTGCCTaGTGGACCCATCATCTGGTG +
Preference number: 4 (lower is better)
Translates to: HGCTARRDTEGLWCRAQRMEASA*WTHHLV
Trigger: CACCAGATGATGGGTCCACCAGGCACTGGCTTCCAT...CCTCTGGGCCCTGCACCAGAGCCCTTCTGTGTCACGGCGGGCTGTGCACCCATG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp CTGGACAGCTGGTGGCAGCACGGGACTGAACCTGCTGGGGTCTGCGTCGCTGCGATGGAAGCCAGTGCCTaGTGGACCCATCATCTGGTG +
Preference number: 4 (lower is better)
Translates to: LDSWWQHGTEPAGVCVAAMEASA*WTHHLV
Trigger: CACCAGATGATGGGTCCACCAGGCACTGGCTTCCAT...CGCAGCGACGCAGACCCCAGCAGGTTCAGTCCCGTGCTGCCACCAGCTGTCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp CCAAGGCAGGACAGGGCGATGCCATTGCAGACCCTCCCACTCCTGCTGGGGTCTGTCGCTGCACTGCTCTaGGGGCTGGAGACAGTGCTA +
Preference number: 4 (lower is better)
Translates to: PRQDRAMPLQTLPLLLGSVAALL*GLETVL
Trigger: TAGCACTGTCTCCAGCCCCCAGAGCAGTGCAGCGAC...AGACCCCAGCAGGAGTGGGAGGGTCTGCAATGGCATCGCCCTGTCCTGCCTTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp GAGAAGGGTCTGGCGGCACCCAGGGTCACTAGAGTGCAGGTGCAGGCACCAGGATGGGACTCCCCGGGGTaGTGGCCACTTTGTTGTGGA +
Preference number: 4 (lower is better)
Translates to: EKGLAAPRVTRVQVQAPGWDSPG*WPLCCG
Trigger: TCCACAACAAAGTGGCCACCACCCCGGGGAGTCCCA...TCCTGGTGCCTGCACCTGCACTCTAGTGACCCTGGGTGCCGCCAGACCCTTCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp GTAGAAGAGAAGGGTCTGGCGGCACCCAGGGTCACTAGAGTGCAGGTGCAGGCATCTGCCGGGACAGTGTaGGTCTCCGATCCTCCGGGG +
Preference number: 4 (lower is better)
Translates to: VEEKGLAAPRVTRVQVQASAGTV*VSDPPG
Trigger: CCCCGGAGGATCGGAGACCCACACTGTCCCGGCAGA...TGCCTGCACCTGCACTCTAGTGACCCTGGGTGCCGCCAGACCCTTCTCTTCTAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp AAGAGAAGGGTCTGGCGGCACCCAGGGTCACTAGAGTGCAGGTGCAGGCACCAGCAGGGAAGGAGGGCGTaGAAGGAGCCTGGTAGCCAG +
Preference number: 4 (lower is better)
Translates to: KRRVWRHPGSLECRCRHQQGRRA*KEPGSQ
Trigger: CTGGCTACCAGGCTCCTTCCACGCCCTCCTTCCCTG...CTGGTGCCTGCACCTGCACTCTAGTGACCCTGGGTGCCGCCAGACCCTTCTCTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp GCTATCGCTGAGACTCCACCAATTGGTTGGCCTACAGGCCTCACCTCCCGACTCCGGTGCTGCCCCCACTaGGACTGGACATGCCGCTGG +
Preference number: 4 (lower is better)
Translates to: AIAETPPIGWPTGLTSRLRCCPH*DWTCRW
Trigger: CCAGCGGCATGTCCAGTCCCAGTGGGGGCAGCACCG...GAGTCGGGAGGTGAGGCCTGTAGGCCAACCAATTGGTGGAGTCTCAGCGATAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp GCAGACCCTCCCACTCCTGCTGGGGTCTTTGTAGAAGAGAAGGGTCTGGCGGCAAAGGCCCCCGGCTCCTaGTCCTTGAGGAGCGCGATG +
Preference number: 4 (lower is better)
Translates to: ADPPTPAGVFVEEKGLAAKAPGS*SLRSAM
Trigger: CATCGCGCTCCTCAAGGACCAGGAGCCGGGGGCCTT...TGCCGCCAGACCCTTCTCTTCTACAAAGACCCCAGCAGGAGTGGGAGGGTCTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp GGCTTCTGGCCAAGGCAGGACAGGGCGATGCCATTGCAGACCCTCCCACTCCTGAACGATGGTGGCAGCTaGCGTGGGGTCTGCAGCCAA +
Preference number: 4 (lower is better)
Translates to: GFWPRQDRAMPLQTLPLLNDGGS*RGVCSQ
Trigger: TTGGCTGCAGACCCCACGCCAGCTGCCACCATCGTT...CAGGAGTGGGAGGGTCTGCAATGGCATCGCCCTGTCCTGCCTTGGCCAGAAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp AAGAGAAGGGTCTGGCGGCACCCAGGGTCACTAGAGTGCAGGTGCAGGCACCAGCCATGGCACTGGCCCTaGGCAAGGGGCAGGGTTCAT +
Preference number: 4 (lower is better)
Translates to: KRRVWRHPGSLECRCRHQPWHWP*ARGRVH
Trigger: ATGAACCCTGCCCCTTGCCCAGGGCCAGTGCCATGG...CTGGTGCCTGCACCTGCACTCTAGTGACCCTGGGTGCCGCCAGACCCTTCTCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp CCCAACTGTCCAGTGGACCTTAGGCCCTTTGGCCCAAGTGCAAGCCTTCTGCCCCCGCAGGGGCACACATaGCTCAGGCTGGAGTGGAGG +
Preference number: 4 (lower is better)
Translates to: PNCPVDLRPFGPSASLLPPQGHT*LRLEWR
Trigger: CCTCCACTCCAGCCTGAGCCATGTGTGCCCCTGCGG...GGGCAGAAGGCTTGCACTTGGGCCAAAGGGCCTAAGGTCCACTGGACAGTTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp CATGGGTGCACAGCCCGCCGTGACACAGAAGGGCTCTGGTGCAGGGCCCAGAGGCTTCCGCAGGGATGCTaGGAGGGAGTTACCAGCTTT +
Preference number: 4 (lower is better)
Translates to: HGCTARRDTEGLWCRAQRLPQGC*EGVTSF
Trigger: AAAGCTGGTAACTCCCTCCCAGCATCCCTGCGGAAG...CCTCTGGGCCCTGCACCAGAGCCCTTCTGTGTCACGGCGGGCTGTGCACCCATG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp GTGTGCATGGGTGCACAGCCCGCCGTGACACAGAAGGGCTCTGGTGCAGGGCCCTCCAGGAGGCAGGGGTaGTGGACAAAAGTAGGAGTG +
Preference number: 4 (lower is better)
Translates to: VCMGAQPAVTQKGSGAGPSRRQG*WTKVGV
Trigger: CACTCCTACTTTTGTCCACCACCCCTGCCTCCTGGA...GGGCCCTGCACCAGAGCCCTTCTGTGTCACGGCGGGCTGTGCACCCATGCACAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp GTGTGCATGGGTGCACAGCCCGCCGTGACACAGAAGGGCTCTGGTGCAGGGCCCGCAGCTGTACAGGAGTaGGGACGCGTCAGTGTACAA +
Preference number: 4 (lower is better)
Translates to: VCMGAQPAVTQKGSGAGPAAVQE*GRVSVQ
Trigger: TTGTACACTGACGCGTCCCCACTCCTGTACAGCTGC...GGGCCCTGCACCAGAGCCCTTCTGTGTCACGGCGGGCTGTGCACCCATGCACAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp CGATGCCATTGCAGACCCTCCCACTCCTGCTGGGGTCTTTGTAGAAGAGAAGGGGAGGGTCGGAAGAGGTaGACCCGCCGCTCCTGGCGC +
Preference number: 4 (lower is better)
Translates to: RCHCRPSHSCWGLCRREGEGRKR*TRRSWR
Trigger: GCGCCAGGAGCGGCGGGTCCACCTCTTCCGACCCTC...CCCTTCTCTTCTACAAAGACCCCAGCAGGAGTGGGAGGGTCTGCAATGGCATCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646520.1
CDS-3UTR CCA 90 bp CCAAGGCAGGACAGGGCGATGCCATTGCAGACCCTCCCACTCCTGCTGGGGTCTTGGTGGGGAGGCCGCTaGGAGGATTTGAGCTGTCCA +
Preference number: 4 (lower is better)
Translates to: PRQDRAMPLQTLPLLLGSWWGGR*EDLSCP
Trigger: TGGACAGCTCAAATCCTCCCAGCGGCCTCCCCACCA...AGACCCCAGCAGGAGTGGGAGGGTCTGCAATGGCATCGCCCTGTCCTGCCTTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646520.1
CDS-3UTR TCA 90 bp CATGGGTGCACAGCCCGCCGTGACACAGAAGGGCTCTGGTGCAGGGCCCAGAGGGCTTGTTGTTCATTTTaGTGGAGCCGGAGAGCAGGC +
Preference number: 4 (lower is better)
Translates to: HGCTARRDTEGLWCRAQRACCSF*WSRRAG
Trigger: GCCTGCTCTCCGGCTCCATCAAAATGAACAACAAGC...CCTCTGGGCCCTGCACCAGAGCCCTTCTGTGTCACGGCGGGCTGTGCACCCATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp CTGGACAGCTGGTGGCAGCACGGGACTGAACCTGCTGGGGTCTGCGTCGCTGCGGCTTCCGAAAAGGATTaGGAGCGGAACATACCGCTG +
Preference number: 4 (lower is better)
Translates to: LDSWWQHGTEPAGVCVAAASEKD*ERNIPL
Trigger: CAGCGGTATGTTCCGCTCTCAATCCTTTTCGGAAGC...CGCAGCGACGCAGACCCCAGCAGGTTCAGTCCCGTGCTGCCACCAGCTGTCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp CCAAGGCAGGACAGGGCGATGCCATTGCAGACCCTCCCACTCCTGCTGGGGTCTATGTCCGCTGGGTTGTaGGGTTTCAGGCCCAGAGCA +
Preference number: 4 (lower is better)
Translates to: PRQDRAMPLQTLPLLLGSMSAGL*GFRPRA
Trigger: TGCTCTGGGCCTGAAACCTCACAACCCAGCGGACAT...AGACCCCAGCAGGAGTGGGAGGGTCTGCAATGGCATCGCCCTGTCCTGCCTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp GAGAAGGGTCTGGCGGCACCCAGGGTCACTAGAGTGCAGGTGCAGGCACCAGGAATGTCCGCTGGGTTGTaGGGTTTCAGGCCCAGAGCA +
Preference number: 4 (lower is better)
Translates to: EKGLAAPRVTRVQVQAPGMSAGL*GFRPRA
Trigger: TGCTCTGGGCCTGAAACCTCACAACCCAGCGGACAT...TCCTGGTGCCTGCACCTGCACTCTAGTGACCCTGGGTGCCGCCAGACCCTTCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp ATTGGTTGGCCTACAGGCCTCACCTCCCGACTCCCCTCACTGCTGGGCGACATTCTGTCCCAGGCTGCCTaGGCGGAAGCCAGACTCCAA +
Preference number: 4 (lower is better)
Translates to: IGWPTGLTSRLPSLLGDILSQAA*AEARLQ
Trigger: TTGGAGTCTGGCTTCCGCTCAGGCAGCCTGGGACAG...AATGTCGCCCAGCAGTGAGGGGAGTCGGGAGGTGAGGCCTGTAGGCCAACCAAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp TCTGCCCTCTGCTGCATGGGCAGCGTGGCTCAGCTAGGGAAACCAAGGCAGAAAGGACGCCAGCCACACTaGACTGAGCTCGAGCCTGGC +
Preference number: 4 (lower is better)
Translates to: SALCCMGSVAQLGKPRQKGRQPH*TELEPG
Trigger: GCCAGGCTCGAGCTCAGTTCAGTGTGGCTGGCGTCC...TTTCTGCCTTGGTTTCCCTAGCTGAGCCACGCTGCCCATGCAGCAGAGGGCAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp TCTTCTCCCAGACCCTTTCCCATCCCAGCCCATGTTCAAGGCCAGACAGCGCTCGGACGCCAGCCACACTaGACTGAGCTCGAGCCTGGC +
Preference number: 4 (lower is better)
Translates to: SSPRPFPIPAHVQGQTALGRQPH*TELEPG
Trigger: GCCAGGCTCGAGCTCAGTTCAGTGTGGCTGGCGTCC...GAGCGCTGTCTGGCCTTGAACATGGGCTGGGATGGGAAAGGGTCTGGGAGAAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp CATGGGTGCACAGCCCGCCGTGACACAGAAGGGCTCTGGTGCAGGGCCCAGAGGGCTATTGCATTGCTATaGAGACCGGAGGCCAGGTTG +
Preference number: 4 (lower is better)
Translates to: HGCTARRDTEGLWCRAQRAIALL*RPEARL
Trigger: CAACCTGGCCTCCGGTCTTCATAGCAATGCAATAGC...CCTCTGGGCCCTGCACCAGAGCCCTTCTGTGTCACGGCGGGCTGTGCACCCATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp CCTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCCTCCGGCTGCGGAGTCTGGTaGCGGGGAGGTGGCAGGGCT +
Preference number: 4 (lower is better)
Translates to: PLPTLHFLLSSEIGPKSSGCGVW*RGGGRA
Trigger: AGCCCTGCCACCTCCCCGTCACCAGACTCCGCAGCC...GGAGGACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp TCTCCTGGCCAGTCTCAGAAGACCCAGGGATCCTCAAAAACCAGGGGAGAAGGAGGCTGCGGAGTCTGGTaGCGGGGAGGTGGCAGGGCT +
Preference number: 4 (lower is better)
Translates to: SPGQSQKTQGSSKTRGEGGCGVW*RGGGRA
Trigger: AGCCCTGCCACCTCCCCGTCACCAGACTCCGCAGCC...TCCTTCTCCCCTGGTTTTTGAGGATCCCTGGGTCTTCTGAGACTGGCCAGGAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp GGCTTCTGGCCAAGGCAGGACAGGGCGATGCCATTGCAGACCCTCCCACTCCTGGGTCTCGGTTTGGAATaGCCAGCTTGCAAGGCAGGG +
Preference number: 4 (lower is better)
Translates to: GFWPRQDRAMPLQTLPLLGLGLE*PACKAG
Trigger: CCCTGCCTTGCAAGCTGGTCATTCCAAACCGAGACC...CAGGAGTGGGAGGGTCTGCAATGGCATCGCCCTGTCCTGCCTTGGCCAGAAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp CATGGGTGCACAGCCCGCCGTGACACAGAAGGGCTCTGGTGCAGGGCCCAGAGGTGGCTCTGTTTGGTTTaGCAACCTACCCCACAGGTG +
Preference number: 4 (lower is better)
Translates to: HGCTARRDTEGLWCRAQRWLCLV*QPTPQV
Trigger: CACCTGTGGGGTAGGTTGTCAAACCAAACAGAGCCA...CCTCTGGGCCCTGCACCAGAGCCCTTCTGTGTCACGGCGGGCTGTGCACCCATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp GTGTGCATGGGTGCACAGCCCGCCGTGACACAGAAGGGCTCTGGTGCAGGGCCCGAGGAGACGCTCAGATaGCATGGGTCAAAGGCCTTT +
Preference number: 4 (lower is better)
Translates to: VCMGAQPAVTQKGSGAGPEETLR*HGSKAF
Trigger: AAAGGCCTTTGACCCATGTCATCTGAGCGTCTCCTC...GGGCCCTGCACCAGAGCCCTTCTGTGTCACGGCGGGCTGTGCACCCATGCACAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp TCTGCCCTCTGCTGCATGGGCAGCGTGGCTCAGCTAGGGAAACCAAGGCAGAAACCCTGCCCCTCTGGGTaGACCACTTCTCACCTGGGC +
Preference number: 4 (lower is better)
Translates to: SALCCMGSVAQLGKPRQKPCPSG*TTSHLG
Trigger: GCCCAGGTGAGAAGTGGTTCACCCAGAGGGGCAGGG...TTTCTGCCTTGGTTTCCCTAGCTGAGCCACGCTGCCCATGCAGCAGAGGGCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp AAGAGAAGGGTCTGGCGGCACCCAGGGTCACTAGAGTGCAGGTGCAGGCACCAGGCCCCGGTGCTGCCGTaGAGGGAGTCTTTCTTCTTC +
Preference number: 4 (lower is better)
Translates to: KRRVWRHPGSLECRCRHQAPVLP*RESFFF
Trigger: GAAGAAGAAAGACTCCCTGCACGGCAGCACCGGGGC...CTGGTGCCTGCACCTGCACTCTAGTGACCCTGGGTGCCGCCAGACCCTTCTCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp TCTCCTGGCCAGTCTCAGAAGACCCAGGGATCCTCAAAAACCAGGGGAGAAGGACACAGCCGAGCCCCCTaGTGGGCGGGACCTGAGGTG +
Preference number: 4 (lower is better)
Translates to: SPGQSQKTQGSSKTRGEGHSRAP*WAGPEV
Trigger: CACCTCAGGTCCCGCCCAGCAGGGGGCTCGGCTGTG...TCCTTCTCCCCTGGTTTTTGAGGATCCCTGGGTCTTCTGAGACTGGCCAGGAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp CCTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCCTCCCACAGCCGAGCCCCCTaGTGGGCGGGACCTGAGGTG +
Preference number: 4 (lower is better)
Translates to: PLPTLHFLLSSEIGPKSSHSRAP*WAGPEV
Trigger: CACCTCAGGTCCCGCCCAGCAGGGGGCTCGGCTGTG...GGAGGACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp ATGCGCACACACGTCCTGTGTTACCACTGGCCAAGGAAACGCGAGTCTCAGGATCACAGCCGAGCCCCCTaGTGGGCGGGACCTGAGGTG +
Preference number: 4 (lower is better)
Translates to: MRTHVLCYHWPRKRESQDHSRAP*WAGPEV
Trigger: CACCTCAGGTCCCGCCCAGCAGGGGGCTCGGCTGTG...ATCCTGAGACTCGCGTTTCCTTGGCCAGTGGTAACACAGGACGTGTGTGCGCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp ATGTCCCACGGTGGCTCTGTTTGGTTTGACAACCTACCCCACAGGTGGCCAGAAGCACAGCCTCCCGGCTaGTTCCCCCTCGGACCGGAG +
Preference number: 4 (lower is better)
Translates to: MSHGGSVWFDNLPHRWPEAQPPG*FPLGPE
Trigger: CTCCGGTCCGAGGGGGAAGCAGCCGGGAGGCTGTGC...TTCTGGCCACCTGTGGGGTAGGTTGTCAAACCAAACAGAGCCACCGTGGGACAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp AAGAGAAGGGTCTGGCGGCACCCAGGGTCACTAGAGTGCAGGTGCAGGCACCAGGACTGTTCAATCTCCTaGTGGGAGGCTGCTCGCGGG +
Preference number: 4 (lower is better)
Translates to: KRRVWRHPGSLECRCRHQDCSIS*WEAARG
Trigger: CCCGCGAGCAGCCTCCCAGCAGGAGATTGAACAGTC...CTGGTGCCTGCACCTGCACTCTAGTGACCCTGGGTGCCGCCAGACCCTTCTCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp CCAAGGCAGGACAGGGCGATGCCATTGCAGACCCTCCCACTCCTGCTGGGGTCTGTAACTCCTGTGGGGTaGAACAGGATGTCCGCTGGG +
Preference number: 4 (lower is better)
Translates to: PRQDRAMPLQTLPLLLGSVTPVG*NRMSAG
Trigger: CCCAGCGGACATCCTGTTGCACCCCACAGGAGTTAC...AGACCCCAGCAGGAGTGGGAGGGTCTGCAATGGCATCGCCCTGTCCTGCCTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000171887.8
ENST00000611415.4
CDS-3UTR GCA 90 bp ATTGGTTGGCCTACAGGCCTCACCTCCCGACTCCCCTCACTGCTGGGCGACATTGGGGACCCTGGTCACTaGTCTCTCCCGACGGGAAAC +
Preference number: 4 (lower is better)
Translates to: IGWPTGLTSRLPSLLGDIGDPGH*SLPTGN
Trigger: GTTTCCCGTCGGGAGAGAGCAGTGACCAGGGTCCCC...AATGTCGCCCAGCAGTGAGGGGAGTCGGGAGGTGAGGCCTGTAGGCCAACCAAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp CCCAACTGTCCAGTGGACCTTAGGCCCTTTGGCCCAAGTGCAAGCCTTCTGCCCGGGGACCCTGGTCACTaGTCTCTCCCGACGGGAAAC +
Preference number: 4 (lower is better)
Translates to: PNCPVDLRPFGPSASLLPGDPGH*SLPTGN
Trigger: GTTTCCCGTCGGGAGAGAGCAGTGACCAGGGTCCCC...GGGCAGAAGGCTTGCACTTGGGCCAAAGGGCCTAAGGTCCACTGGACAGTTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp GTGAGGAAGGGAAAAGCGACCGTGAAAGCTGACCCCAGACTCAGTCCTGGGCCCGGTAGCCAGAGGCACTaGTCTGCCGGGACAGTGTGG +
Preference number: 4 (lower is better)
Translates to: VRKGKATVKADPRLSPGPGSQRH*SAGTVW
Trigger: CCACACTGTCCCGGCAGAGCAGTGCCTCTGGCTACC...GGGCCCAGGACTGAGTCTGGGGTCAGCTTTCACGGTCGCTTTTCCCTTCCTCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp GTGAGGAAGGGAAAAGCGACCGTGAAAGCTGACCCCAGACTCAGTCCTGGGCCCGGTGTTGGGCTCCCTTaGCGGAAGGCTGCGGAGTCT +
Preference number: 4 (lower is better)
Translates to: VRKGKATVKADPRLSPGPGVGLP*RKAAES
Trigger: AGACTCCGCAGCCTTCCGGCAAGGGAGCCCAACACC...GGGCCCAGGACTGAGTCTGGGGTCAGCTTTCACGGTCGCTTTTCCCTTCCTCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp CGCAGGGATGCTGGGAGGGAGTTACCAGCTTTCTGGCATGAATGGGTCCTCCCGCACTGGGACTGGACATaGCGCTGGCGACAGGCGAAG +
Preference number: 4 (lower is better)
Translates to: RRDAGRELPAFWHEWVLPHWDWT*RWRQAK
Trigger: CTTCGCCTGTCGCCAGCGGCATGTCCAGTCCCAGTG...CGGGAGGACCCATTCATGCCAGAAAGCTGGTAACTCCCTCCCAGCATCCCTGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp GCAGACCCTCCCACTCCTGCTGGGGTCTTTGTAGAAGAGAAGGGTCTGGCGGCAGGCAGGACAGGGCGATaGCATTGCAGACCCTCCCAC +
Preference number: 4 (lower is better)
Translates to: ADPPTPAGVFVEEKGLAAGRTGR*HCRPSH
Trigger: GTGGGAGGGTCTGCAATGGCATCGCCCTGTCCTGCC...TGCCGCCAGACCCTTCTCTTCTACAAAGACCCCAGCAGGAGTGGGAGGGTCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp GTAGAAGAGAAGGGTCTGGCGGCACCCAGGGTCACTAGAGTGCAGGTGCAGGCAGGCAGGACAGGGCGATaGCATTGCAGACCCTCCCAC +
Preference number: 4 (lower is better)
Translates to: VEEKGLAAPRVTRVQVQAGRTGR*HCRPSH
Trigger: GTGGGAGGGTCTGCAATGGCATCGCCCTGTCCTGCC...TGCCTGCACCTGCACTCTAGTGACCCTGGGTGCCGCCAGACCCTTCTCTTCTAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp CGCAGGGATGCTGGGAGGGAGTTACCAGCTTTCTGGCATGAATGGGTCCTCCCGGTAGGCGATGTGGTGTaGAGGCAGCAGGCCCAGGAG +
Preference number: 4 (lower is better)
Translates to: RRDAGRELPAFWHEWVLPVGDVV*RQQAQE
Trigger: CTCCTGGGCCTGCTGCCTGCACACCACATCGCCTAC...CGGGAGGACCCATTCATGCCAGAAAGCTGGTAACTCCCTCCCAGCATCCCTGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp GTGAGGAAGGGAAAAGCGACCGTGAAAGCTGACCCCAGACTCAGTCCTGGGCCCTGGAGGGGCTGGCCATaGATGCAAGGTGGGCTGTGG +
Preference number: 4 (lower is better)
Translates to: VRKGKATVKADPRLSPGPWRGWP*MQGGLW
Trigger: CCACAGCCCACCTTGCATGCATGGCCAGCCCCTCCA...GGGCCCAGGACTGAGTCTGGGGTCAGCTTTCACGGTCGCTTTTCCCTTCCTCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp AAGAGAAGGGTCTGGCGGCACCCAGGGTCACTAGAGTGCAGGTGCAGGCACCAGCTCCTTCCGCAGGGATaGTGGGAGGGAGTTACCAGC +
Preference number: 4 (lower is better)
Translates to: KRRVWRHPGSLECRCRHQLLPQG*WEGVTS
Trigger: GCTGGTAACTCCCTCCCAGCATCCCTGCGGAAGGAG...CTGGTGCCTGCACCTGCACTCTAGTGACCCTGGGTGCCGCCAGACCCTTCTCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp GGCTTCTGGCCAAGGCAGGACAGGGCGATGCCATTGCAGACCCTCCCACTCCTGCTTGTCCAGGAGGGCTaGCCCTCCTGCTTTCACACA +
Preference number: 4 (lower is better)
Translates to: GFWPRQDRAMPLQTLPLLLVQEG*PSCFHT
Trigger: TGTGTGAAAGCAGGAGGGGCAGCCCTCCTGGACAAG...CAGGAGTGGGAGGGTCTGCAATGGCATCGCCCTGTCCTGCCTTGGCCAGAAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp GGCTTCTGGCCAAGGCAGGACAGGGCGATGCCATTGCAGACCCTCCCACTCCTGCTCCCCTGGAGCCCCTaGACAGGCTCATCAGAACAA +
Preference number: 4 (lower is better)
Translates to: GFWPRQDRAMPLQTLPLLLPWSP*TGSSEQ
Trigger: TTGTTCTGATGAGCCTGTGCAGGGGCTCCAGGGGAG...CAGGAGTGGGAGGGTCTGCAATGGCATCGCCCTGTCCTGCCTTGGCCAGAAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TCTGCCCTCTGCTGCATGGGCAGCGTGGCTCAGCTAGGGAAACCAAGGCAGAAACTGATGGGCTGGAGGTaGGGCTGGACACTCGGGGTG +
Preference number: 4 (lower is better)
Translates to: SALCCMGSVAQLGKPRQKLMGWR*GWTLGV
Trigger: CACCCCGAGTGTCCAGCCCCACCTCCAGCCCATCAG...TTTCTGCCTTGGTTTCCCTAGCTGAGCCACGCTGCCCATGCAGCAGAGGGCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp CTGGACAGCTGGTGGCAGCACGGGACTGAACCTGCTGGGGTCTGCGTCGCTGCGTGGATGGCACAGGTGTaGAACTGCACACGGAAGATG +
Preference number: 4 (lower is better)
Translates to: LDSWWQHGTEPAGVCVAAWMAQV*NCTRKM
Trigger: CATCTTCCGTGTGCAGTTCCACACCTGTGCCATCCA...CGCAGCGACGCAGACCCCAGCAGGTTCAGTCCCGTGCTGCCACCAGCTGTCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp ATTCGCTCCAGCCTCTGCTTTCTGCTTGGCCGCTCAGCGCCCGGGGATGGAGGACCCCCAGGTCATGGATaGCACAGGTGTGGAACTGCA +
Preference number: 4 (lower is better)
Translates to: IRSSLCFLLGRSAPGDGGPPGHG*HRCGTA
Trigger: TGCAGTTCCACACCTGTGCCATCCATGACCTGGGGG...TCCTCCATCCCCGGGCGCTGAGCGGCCAAGCAGAAAGCAGAGGCTGGAGCGAAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000453356.1
CDS-3UTR CCA 90 bp AAGAGAAGGGTCTGGCGGCACCCAGGGTCACTAGAGTGCAGGTGCAGGCACCAGAGCGTGTGTTCCACGTaGTTGGGGGTGGCCGACAGT +
Preference number: 4 (lower is better)
Translates to: KRRVWRHPGSLECRCRHQSVCST*LGVADS
Trigger: ACTGTCGGCCACCCCCAACCACGTGGAACACACGCT...CTGGTGCCTGCACCTGCACTCTAGTGACCCTGGGTGCCGCCAGACCCTTCTCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp CCAAGGCAGGACAGGGCGATGCCATTGCAGACCCTCCCACTCCTGCTGGGGTCTTCTTGTCGGTCTTGGTaGAGGCTGTGGAGTTGCCCG +
Preference number: 4 (lower is better)
Translates to: PRQDRAMPLQTLPLLLGSSCRSW*RLWSCP
Trigger: CGGGCAACTCCACAGCCTCCACCAAGACCGACAAGA...AGACCCCAGCAGGAGTGGGAGGGTCTGCAATGGCATCGCCCTGTCCTGCCTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TCTTCTCCCAGACCCTTTCCCATCCCAGCCCATGTTCAAGGCCAGACAGCGCTCGACTCAAGGCAGCAGTaGCACTGGAGGCCCCGGGGA +
Preference number: 4 (lower is better)
Translates to: SSPRPFPIPAHVQGQTALDSRQQ*HWRPRG
Trigger: TCCCCGGGGCCTCCAGTGCCACTGCTGCCTTGAGTC...GAGCGCTGTCTGGCCTTGAACATGGGCTGGGATGGGAAAGGGTCTGGGAGAAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TCTGCCCTCTGCTGCATGGGCAGCGTGGCTCAGCTAGGGAAACCAAGGCAGAAAGACTCAAGGCAGCAGTaGCACTGGAGGCCCCGGGGA +
Preference number: 4 (lower is better)
Translates to: SALCCMGSVAQLGKPRQKDSRQQ*HWRPRG
Trigger: TCCCCGGGGCCTCCAGTGCCACTGCTGCCTTGAGTC...TTTCTGCCTTGGTTTCCCTAGCTGAGCCACGCTGCCCATGCAGCAGAGGGCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp ATGTCCCACGGTGGCTCTGTTTGGTTTGACAACCTACCCCACAGGTGGCCAGAAAGCCGAGCCCCCTGCTaGGCGGGACCTGAGGTGCTG +
Preference number: 4 (lower is better)
Translates to: MSHGGSVWFDNLPHRWPESRAPC*AGPEVL
Trigger: CAGCACCTCAGGTCCCGCCCAGCAGGGGGCTCGGCT...TTCTGGCCACCTGTGGGGTAGGTTGTCAAACCAAACAGAGCCACCGTGGGACAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TTCCTTCGCAGGTCCCCTCTCCATTGTTTTCTCGCCCAATCCTTCCCTCTTGCTCGCATGGGGGCCGTGTaGCCAGCATGGGCAGGCCCC +
Preference number: 4 (lower is better)
Translates to: FLRRSPLHCFLAQSFPLARMGAV*PAWAGP
Trigger: GGGGCCTGCCCATGCTGGCCACACGGCCCCCATGCG...AGCAAGAGGGAAGGATTGGGCGAGAAAACAATGGAGAGGGGACCTGCGAAGGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp CTTCCCTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCCGCATGGGGGCCGTGTaGCCAGCATGGGCAGGCCCC +
Preference number: 4 (lower is better)
Translates to: LPSPHVALSSLLRNWPKVRMGAV*PAWAGP
Trigger: GGGGCCTGCCCATGCTGGCCACACGGCCCCCATGCG...GACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGGGAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp CCAGAACACCGTGATAGCAGGCTGATCAAACCGCTCACTTCCTCCCTGTTTTCCCGCATGGGGGCCGTGTaGCCAGCATGGGCAGGCCCC +
Preference number: 4 (lower is better)
Translates to: PEHRDSRLIKPLTSSLFSRMGAV*PAWAGP
Trigger: GGGGCCTGCCCATGCTGGCCACACGGCCCCCATGCG...GGAAAACAGGGAGGAAGTGAGCGGTTTGATCAGCCTGCTATCACGGTGTTCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp CCCAACTGTCCAGTGGACCTTAGGCCCTTTGGCCCAAGTGCAAGCCTTCTGCCCGGGCATAGTGGGAGGTaGTCACTGGCTGTGGCCAGG +
Preference number: 4 (lower is better)
Translates to: PNCPVDLRPFGPSASLLPGHSGR*SLAVAR
Trigger: CCTGGCCACAGCCAGTGACCACCTCCCACTATGCCC...GGGCAGAAGGCTTGCACTTGGGCCAAAGGGCCTAAGGTCCACTGGACAGTTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp ACAGGGCGATGCCATTGCAGACCCTCCCACTCCTGCTGGGGTCTTTGTAGAAGACTGCTGGCGTGGAGGTaGGCGAGGCTGCTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: TGRCHCRPSHSCWGLCRRLLAWR*ARLLLL
Trigger: CAGCAGCAGCAGCCTCGCCCACCTCCACGCCAGCAG...TCTTCTACAAAGACCCCAGCAGGAGTGGGAGGGTCTGCAATGGCATCGCCCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp GTAGAAGAGAAGGGTCTGGCGGCACCCAGGGTCACTAGAGTGCAGGTGCAGGCATCTTTCCTGCTGGCGTaGAGGTGGGCGAGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: VEEKGLAAPRVTRVQVQASFLLA*RWARLL
Trigger: CAGCAGCCTCGCCCACCTCCACGCCAGCAGGAAAGA...TGCCTGCACCTGCACTCTAGTGACCCTGGGTGCCGCCAGACCCTTCTCTTCTAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp GTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCATGGGTCCCCTCCCCACAAGCCTCCGCAGAGGGGCTaGGGGCTCTGCAGGCTGCTT +
Preference number: 4 (lower is better)
Translates to: VLLLGSRVVRIHGSPPHKPPQRG*GLCRLL
Trigger: AAGCAGCCTGCAGAGCCCCCAGCCCCTCTGCGGAGG...CTTGTGGGGAGGGGACCCATGAATCCTGACCACTCTTGAACCCAGAAGGAGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp GTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCATGGGTCCCCTCCCCACAAGCACCCCACTGGGTGGTaGGCTGCTCGGGGAGGTTCC +
Preference number: 4 (lower is better)
Translates to: VLLLGSRVVRIHGSPPHKHPTGW*AARGGS
Trigger: GGAACCTCCCCGAGCAGCCCACCACCCAGTGGGGTG...CTTGTGGGGAGGGGACCCATGAATCCTGACCACTCTTGAACCCAGAAGGAGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp GGGCGATGCCATTGCAGACCCTCCCACTCCTGCTGGGGTCTTTGTAGAAGAGAACCAACAGAGGCTGGGTaGGCGTCCGGGGACCCTGGT +
Preference number: 4 (lower is better)
Translates to: GRCHCRPSHSCWGLCRREPTEAG*ASGDPG
Trigger: ACCAGGGTCCCCGGACGCCCACCCAGCCTCTGTTGG...TTCTCTTCTACAAAGACCCCAGCAGGAGTGGGAGGGTCTGCAATGGCATCGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp CGATGCCATTGCAGACCCTCCCACTCCTGCTGGGGTCTTTGTAGAAGAGAAGGGGACTCCAACAGAGGCTaGGTGGGCGTCCGGGGACCC +
Preference number: 4 (lower is better)
Translates to: RCHCRPSHSCWGLCRREGDSNRG*VGVRGP
Trigger: GGGTCCCCGGACGCCCACCCAGCCTCTGTTGGAGTC...CCCTTCTCTTCTACAAAGACCCCAGCAGGAGTGGGAGGGTCTGCAATGGCATCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp CCCAACTGTCCAGTGGACCTTAGGCCCTTTGGCCCAAGTGCAAGCCTTCTGCCCCTCCCAGGCACCGTGTaGACGCCAGCCACACTGAAC +
Preference number: 4 (lower is better)
Translates to: PNCPVDLRPFGPSASLLPLPGTV*TPATLN
Trigger: GTTCAGTGTGGCTGGCGTCCACACGGTGCCTGGGAG...GGGCAGAAGGCTTGCACTTGGGCCAAAGGGCCTAAGGTCCACTGGACAGTTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp CCAAGGCAGGACAGGGCGATGCCATTGCAGACCCTCCCACTCCTGCTGGGGTCTTCAAACTGGGACTGCTaGGGGCAGCCATGCTGGGAT +
Preference number: 4 (lower is better)
Translates to: PRQDRAMPLQTLPLLLGSSNWDC*GQPCWD
Trigger: ATCCCAGCATGGCTGCCCCCAGCAGTCCCAGTTTGA...AGACCCCAGCAGGAGTGGGAGGGTCTGCAATGGCATCGCCCTGTCCTGCCTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp GGCTTCTGGCCAAGGCAGGACAGGGCGATGCCATTGCAGACCCTCCCACTCCTGCACTGCTCTGGGGGCTaGAGACAGTGCTACCATGGA +
Preference number: 4 (lower is better)
Translates to: GFWPRQDRAMPLQTLPLLHCSGG*RQCYHG
Trigger: TCCATGGTAGCACTGTCTCCAGCCCCCAGAGCAGTG...CAGGAGTGGGAGGGTCTGCAATGGCATCGCCCTGTCCTGCCTTGGCCAGAAGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp ATTGGTTGGCCTACAGGCCTCACCTCCCGACTCCCCTCACTGCTGGGCGACATTCAGGGAAGGAGGGCGTaGAAGGAGCCTGGTAGCCAG +
Preference number: 4 (lower is better)
Translates to: IGWPTGLTSRLPSLLGDIQGRRA*KEPGSQ
Trigger: CTGGCTACCAGGCTCCTTCCACGCCCTCCTTCCCTG...AATGTCGCCCAGCAGTGAGGGGAGTCGGGAGGTGAGGCCTGTAGGCCAACCAAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp CGATGCCATTGCAGACCCTCCCACTCCTGCTGGGGTCTTTGTAGAAGAGAAGGGCTGGTGACGGGGAGGTaGCAGGGCTGCTCAGGCCAG +
Preference number: 4 (lower is better)
Translates to: RCHCRPSHSCWGLCRREGLVTGR*QGCSGQ
Trigger: CTGGCCTGAGCAGCCCTGCCACCTCCCCGTCACCAG...CCCTTCTCTTCTACAAAGACCCCAGCAGGAGTGGGAGGGTCTGCAATGGCATCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp ACAGGGCGATGCCATTGCAGACCCTCCCACTCCTGCTGGGGTCTTTGTAGAAGACGGTGCTGCCCCCACTaGGACTGGACATGCCGCTGG +
Preference number: 4 (lower is better)
Translates to: TGRCHCRPSHSCWGLCRRRCCPH*DWTCRW
Trigger: CCAGCGGCATGTCCAGTCCCAGTGGGGGCAGCACCG...TCTTCTACAAAGACCCCAGCAGGAGTGGGAGGGTCTGCAATGGCATCGCCCTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp GGGCGATGCCATTGCAGACCCTCCCACTCCTGCTGGGGTCTTTGTAGAAGAGAACGGTGCTGCCCCCACTaGGACTGGACATGCCGCTGG +
Preference number: 4 (lower is better)
Translates to: GRCHCRPSHSCWGLCRRERCCPH*DWTCRW
Trigger: CCAGCGGCATGTCCAGTCCCAGTGGGGGCAGCACCG...TTCTCTTCTACAAAGACCCCAGCAGGAGTGGGAGGGTCTGCAATGGCATCGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp GTAGAAGAGAAGGGTCTGGCGGCACCCAGGGTCACTAGAGTGCAGGTGCAGGCACCATGGCACTGGCCCTaGGCAAGGGGCAGGGTTCAT +
Preference number: 4 (lower is better)
Translates to: VEEKGLAAPRVTRVQVQAPWHWP*ARGRVH
Trigger: ATGAACCCTGCCCCTTGCCCAGGGCCAGTGCCATGG...TGCCTGCACCTGCACTCTAGTGACCCTGGGTGCCGCCAGACCCTTCTCTTCTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp CCCAACTGTCCAGTGGACCTTAGGCCCTTTGGCCCAAGTGCAAGCCTTCTGCCCCTCCAGACACCCAGCTaGACAGCTGGTGGCAGCACG +
Preference number: 4 (lower is better)
Translates to: PNCPVDLRPFGPSASLLPLQTPS*TAGGST
Trigger: CGTGCTGCCACCAGCTGTCCAGCTGGGTGTCTGGAG...GGGCAGAAGGCTTGCACTTGGGCCAAAGGGCCTAAGGTCCACTGGACAGTTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp CGCAGGGATGCTGGGAGGGAGTTACCAGCTTTCTGGCATGAATGGGTCCTCCCGCTCCAGACACCCAGCTaGACAGCTGGTGGCAGCACG +
Preference number: 4 (lower is better)
Translates to: RRDAGRELPAFWHEWVLPLQTPS*TAGGST
Trigger: CGTGCTGCCACCAGCTGTCCAGCTGGGTGTCTGGAG...CGGGAGGACCCATTCATGCCAGAAAGCTGGTAACTCCCTCCCAGCATCCCTGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp AAGAGAAGGGTCTGGCGGCACCCAGGGTCACTAGAGTGCAGGTGCAGGCACCAGTGGGAAAAAGCCACGTaGAGCTCACTGGGCCCCTCC +
Preference number: 4 (lower is better)
Translates to: KRRVWRHPGSLECRCRHQWEKAT*SSLGPS
Trigger: GGAGGGGCCCAGTGAGCTCCACGTGGCTTTTTCCCA...CTGGTGCCTGCACCTGCACTCTAGTGACCCTGGGTGCCGCCAGACCCTTCTCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp GTGAGGAAGGGAAAAGCGACCGTGAAAGCTGACCCCAGACTCAGTCCTGGGCCCTCCAGGGCCTGGACCTaGGGTAAAGGGCTGCTCTGG +
Preference number: 4 (lower is better)
Translates to: VRKGKATVKADPRLSPGPSRAWT*GKGLLW
Trigger: CCAGAGCAGCCCTTTACCCCAGGTCCAGGCCCTGGA...GGGCCCAGGACTGAGTCTGGGGTCAGCTTTCACGGTCGCTTTTCCCTTCCTCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp GTGTGCATGGGTGCACAGCCCGCCGTGACACAGAAGGGCTCTGGTGCAGGGCCCGTCCTGTGTTACCACTaGCCAAGGAAACGCGAGTCT +
Preference number: 4 (lower is better)
Translates to: VCMGAQPAVTQKGSGAGPVLCYH*PRKRES
Trigger: AGACTCGCGTTTCCTTGGCCAGTGGTAACACAGGAC...GGGCCCTGCACCAGAGCCCTTCTGTGTCACGGCGGGCTGTGCACCCATGCACAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp CCAAGGCAGGACAGGGCGATGCCATTGCAGACCCTCCCACTCCTGCTGGGGTCTTCACACTCATGTTTCTaGTGGGCTGGAGGTGGGGCT +
Preference number: 4 (lower is better)
Translates to: PRQDRAMPLQTLPLLLGSSHSCF*WAGGGA
Trigger: AGCCCCACCTCCAGCCCATCAGAAACATGAGTGTGA...AGACCCCAGCAGGAGTGGGAGGGTCTGCAATGGCATCGCCCTGTCCTGCCTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp GTGAGGAAGGGAAAAGCGACCGTGAAAGCTGACCCCAGACTCAGTCCTGGGCCCGCCCCACCATTGACATaGACCTGGGCTGGGACAACG +
Preference number: 4 (lower is better)
Translates to: VRKGKATVKADPRLSPGPAPPLT*TWAGTT
Trigger: CGTTGTCCCAGCCCAGGTTCATGTCAATGGTGGGGC...GGGCCCAGGACTGAGTCTGGGGTCAGCTTTCACGGTCGCTTTTCCCTTCCTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp GTGAGGAAGGGAAAAGCGACCGTGAAAGCTGACCCCAGACTCAGTCCTGGGCCCGTCAGTGGATGGGACTaGCGGGAGGATCCAGAGAGG +
Preference number: 4 (lower is better)
Translates to: VRKGKATVKADPRLSPGPVSGWD*REDPER
Trigger: CCTCTCTGGATCCTCCCGTCAGTCCCATCCACTGAC...GGGCCCAGGACTGAGTCTGGGGTCAGCTTTCACGGTCGCTTTTCCCTTCCTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp CACATGCGCACACACGTCCTGTGTTACCACTGGCCAAGGAAACGCGAGTCTCAGTTGGGCTCAGAGTCCTaGGCTCGGGGTCCAGCCACC +
Preference number: 4 (lower is better)
Translates to: HMRTHVLCYHWPRKRESQLGSES*ARGPAT
Trigger: GGTGGCTGGACCCCGAGCTCAGGACTCTGAGCCCAA...CTGAGACTCGCGTTTCCTTGGCCAGTGGTAACACAGGACGTGTGTGCGCATGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp GCAGACCCTCCCACTCCTGCTGGGGTCTTTGTAGAAGAGAAGGGTCTGGCGGCACCAGCCACACTGAACTaGGCTCGAGCCTGGCTTTCC +
Preference number: 4 (lower is better)
Translates to: ADPPTPAGVFVEEKGLAAPATLN*ARAWLS
Trigger: GGAAAGCCAGGCTCGAGCTCAGTTCAGTGTGGCTGG...TGCCGCCAGACCCTTCTCTTCTACAAAGACCCCAGCAGGAGTGGGAGGGTCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp GTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCATGGGTCCCCTCCCCACAAGGGACGCCAGCCACACTaGACTGAGCTCGAGCCTGGC +
Preference number: 4 (lower is better)
Translates to: VLLLGSRVVRIHGSPPHKGRQPH*TELEPG
Trigger: GCCAGGCTCGAGCTCAGTTCAGTGTGGCTGGCGTCC...CTTGTGGGGAGGGGACCCATGAATCCTGACCACTCTTGAACCCAGAAGGAGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp CCAGAACACCGTGATAGCAGGCTGATCAAACCGCTCACTTCCTCCCTGTTTTCCGGCTGCGGAGTCTGGTaGCGGGGAGGTGGCAGGGCT +
Preference number: 4 (lower is better)
Translates to: PEHRDSRLIKPLTSSLFSGCGVW*RGGGRA
Trigger: AGCCCTGCCACCTCCCCGTCACCAGACTCCGCAGCC...GGAAAACAGGGAGGAAGTGAGCGGTTTGATCAGCCTGCTATCACGGTGTTCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp CGCAGGGATGCTGGGAGGGAGTTACCAGCTTTCTGGCATGAATGGGTCCTCCCGTGCCCGGTCTCCCACTaGCATCCTTCGCTTCTCTGG +
Preference number: 4 (lower is better)
Translates to: RRDAGRELPAFWHEWVLPCPVSH*HPSLLW
Trigger: CCAGAGAAGCGAAGGATGTCAGTGGGAGACCGGGCA...CGGGAGGACCCATTCATGCCAGAAAGCTGGTAACTCCCTCCCAGCATCCCTGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp CCCAACTGTCCAGTGGACCTTAGGCCCTTTGGCCCAAGTGCAAGCCTTCTGCCCTGGCCTGTGGCCCAGTaGGTGACTCCATGTCCACAG +
Preference number: 4 (lower is better)
Translates to: PNCPVDLRPFGPSASLLPWPVAQ*VTPCPQ
Trigger: CTGTGGACATGGAGTCACTCACTGGGCCACAGGCCA...GGGCAGAAGGCTTGCACTTGGGCCAAAGGGCCTAAGGTCCACTGGACAGTTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp GGCTTCTGGCCAAGGCAGGACAGGGCGATGCCATTGCAGACCCTCCCACTCCTGGCTGGTCCAGGGGCATaGAACCCAATAACAAGGCTG +
Preference number: 4 (lower is better)
Translates to: GFWPRQDRAMPLQTLPLLAGPGA*NPITRL
Trigger: CAGCCTTGTTATTGGGTTTCATGCCCCTGGACCAGC...CAGGAGTGGGAGGGTCTGCAATGGCATCGCCCTGTCCTGCCTTGGCCAGAAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp AAGAGAAGGGTCTGGCGGCACCCAGGGTCACTAGAGTGCAGGTGCAGGCACCAGGCAGGTAAGCAGGTCTaGGATAAGGCTGGTCCAGGG +
Preference number: 4 (lower is better)
Translates to: KRRVWRHPGSLECRCRHQAGKQV*DKAGPG
Trigger: CCCTGGACCAGCCTTATCTCAGACCTGCTTACCTGC...CTGGTGCCTGCACCTGCACTCTAGTGACCCTGGGTGCCGCCAGACCCTTCTCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp GTAGAAGAGAAGGGTCTGGCGGCACCCAGGGTCACTAGAGTGCAGGTGCAGGCAAACCCCTCCCAATGCTaGGCCCCACACAGTCTAGGG +
Preference number: 4 (lower is better)
Translates to: VEEKGLAAPRVTRVQVQANPSQC*APHSLG
Trigger: CCCTAGACTGTGTGGGGCTCAGCATTGGGAGGGGTT...TGCCTGCACCTGCACTCTAGTGACCCTGGGTGCCGCCAGACCCTTCTCTTCTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp CCAAGGCAGGACAGGGCGATGCCATTGCAGACCCTCCCACTCCTGCTGGGGTCTAGGGAAAAGCGACCGTaGAAGCTGACCCCAGACTCA +
Preference number: 4 (lower is better)
Translates to: PRQDRAMPLQTLPLLLGSREKRP*KLTPDS
Trigger: TGAGTCTGGGGTCAGCTTTCACGGTCGCTTTTCCCT...AGACCCCAGCAGGAGTGGGAGGGTCTGCAATGGCATCGCCCTGTCCTGCCTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp ATTGGTTGGCCTACAGGCCTCACCTCCCGACTCCCCTCACTGCTGGGCGACATTACCAGCTTTCTGGCATaGATGGGTCCTCCCGCAGGG +
Preference number: 4 (lower is better)
Translates to: IGWPTGLTSRLPSLLGDITSFLA*MGPPAG
Trigger: CCCTGCGGGAGGACCCATTCATGCCAGAAAGCTGGT...AATGTCGCCCAGCAGTGAGGGGAGTCGGGAGGTGAGGCCTGTAGGCCAACCAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp CACATGCGCACACACGTCCTGTGTTACCACTGGCCAAGGAAACGCGAGTCTCAGGTGGCAGCACGGGACTaGACCTGCTGGGGTCTGCGT +
Preference number: 4 (lower is better)
Translates to: HMRTHVLCYHWPRKRESQVAARD*TCWGLR
Trigger: ACGCAGACCCCAGCAGGTTCAGTCCCGTGCTGCCAC...CTGAGACTCGCGTTTCCTTGGCCAGTGGTAACACAGGACGTGTGTGCGCATGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp ACAGGGCGATGCCATTGCAGACCCTCCCACTCCTGCTGGGGTCTTTGTAGAAGACCCTGCCCCTCTGGGTaGACCACTTCTCACCTGGGC +
Preference number: 4 (lower is better)
Translates to: TGRCHCRPSHSCWGLCRRPCPSG*TTSHLG
Trigger: GCCCAGGTGAGAAGTGGTTCACCCAGAGGGGCAGGG...TCTTCTACAAAGACCCCAGCAGGAGTGGGAGGGTCTGCAATGGCATCGCCCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp CCAAGGCAGGACAGGGCGATGCCATTGCAGACCCTCCCACTCCTGCTGGGGTCTTTGGACTTGAGCATCTaGGCCACCTCACGGAGGTTG +
Preference number: 4 (lower is better)
Translates to: PRQDRAMPLQTLPLLLGSLDLSI*ATSRRL
Trigger: CAACCTCCGTGAGGTGGCGCAGATGCTCAAGTCCAA...AGACCCCAGCAGGAGTGGGAGGGTCTGCAATGGCATCGCCCTGTCCTGCCTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp GTGAGGAAGGGAAAAGCGACCGTGAAAGCTGACCCCAGACTCAGTCCTGGGCCCCCACCACCTCCTCCATaGCGTCATCTCGATGCCCAC +
Preference number: 4 (lower is better)
Translates to: VRKGKATVKADPRLSPGPPPPPP*RHLDAH
Trigger: GTGGGCATCGAGATGACGGCATGGAGGAGGTGGTGG...GGGCCCAGGACTGAGTCTGGGGTCAGCTTTCACGGTCGCTTTTCCCTTCCTCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp CCCAACTGTCCAGTGGACCTTAGGCCCTTTGGCCCAAGTGCAAGCCTTCTGCCCGCCCCGGTGCTGCCGTaGAGGGAGTCTTTCTTCTTC +
Preference number: 4 (lower is better)
Translates to: PNCPVDLRPFGPSASLLPAPVLP*RESFFF
Trigger: GAAGAAGAAAGACTCCCTGCACGGCAGCACCGGGGC...GGGCAGAAGGCTTGCACTTGGGCCAAAGGGCCTAAGGTCCACTGGACAGTTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp GGGCGATGCCATTGCAGACCCTCCCACTCCTGCTGGGGTCTTTGTAGAAGAGAAGGGCGGGACCTGAGGTaGTGGGTGTGGTACATGGCG +
Preference number: 4 (lower is better)
Translates to: GRCHCRPSHSCWGLCRREGRDLR*WVWYMA
Trigger: CGCCATGTACCACACCCAGCACCTCAGGTCCCGCCC...TTCTCTTCTACAAAGACCCCAGCAGGAGTGGGAGGGTCTGCAATGGCATCGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp CTTCCCTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCGCACAGCCTCCCGGCTaGTTCCCCCTCGGACCGGAG +
Preference number: 4 (lower is better)
Translates to: LPSPHVALSSLLRNWPKVAQPPG*FPLGPE
Trigger: CTCCGGTCCGAGGGGGAAGCAGCCGGGAGGCTGTGC...GACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGGGAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp CCCAACTGTCCAGTGGACCTTAGGCCCTTTGGCCCAAGTGCAAGCCTTCTGCCCAAGTGGGCTCTTTCCTaGTGGCGTGGAGGTGGGCGA +
Preference number: 4 (lower is better)
Translates to: PNCPVDLRPFGPSASLLPKWALS*WRGGGR
Trigger: TCGCCCACCTCCACGCCAGCAGGAAAGAGCCCACTT...GGGCAGAAGGCTTGCACTTGGGCCAAAGGGCCTAAGGTCCACTGGACAGTTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp GTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCATGGGTCCCCTCCCCACAAGGGGGATGGGGGTCTCTaGCAATGGCTGAGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: VLLLGSRVVRIHGSPPHKGDGGL*QWLRAG
Trigger: CCCAGCCCTCAGCCATTGGCAGAGACCCCCATCCCC...CTTGTGGGGAGGGGACCCATGAATCCTGACCACTCTTGAACCCAGAAGGAGGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp GTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCATGGGTCCCCTCCCCACAAGCTCCTGCTGGGAGGCTaGTCGCGGGAACTCAGGGAG +
Preference number: 4 (lower is better)
Translates to: VLLLGSRVVRIHGSPPHKLLLGG*SRELRE
Trigger: CTCCCTGAGTTCCCGCGAGCAGCCTCCCAGCAGGAG...CTTGTGGGGAGGGGACCCATGAATCCTGACCACTCTTGAACCCAGAAGGAGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp CACATGCGCACACACGTCCTGTGTTACCACTGGCCAAGGAAACGCGAGTCTCAGCTCCTGCTGGGAGGCTaGTCGCGGGAACTCAGGGAG +
Preference number: 4 (lower is better)
Translates to: HMRTHVLCYHWPRKRESQLLLGG*SRELRE
Trigger: CTCCCTGAGTTCCCGCGAGCAGCCTCCCAGCAGGAG...CTGAGACTCGCGTTTCCTTGGCCAGTGGTAACACAGGACGTGTGTGCGCATGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp CGATGCCATTGCAGACCCTCCCACTCCTGCTGGGGTCTTTGTAGAAGAGAAGGGGGGGGCTCTGCAGGCTaGTTCTCCCGAGCCTGTACC +
Preference number: 4 (lower is better)
Translates to: RCHCRPSHSCWGLCRREGGGSAG*FSRACT
Trigger: GGTACAGGCTCGGGAGAAGCAGCCTGCAGAGCCCCC...CCCTTCTCTTCTACAAAGACCCCAGCAGGAGTGGGAGGGTCTGCAATGGCATCG
61% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp CCCAACTGTCCAGTGGACCTTAGGCCCTTTGGCCCAAGTGCAAGCCTTCTGCCCGGCTGCTGTAGCTACTaGCCACAGTCGGGAGAGGAG +
Preference number: 4 (lower is better)
Translates to: PNCPVDLRPFGPSASLLPGCCSY*PQSGEE
Trigger: CTCCTCTCCCGACTGTGGGCAGTAGCTACAGCAGCC...GGGCAGAAGGCTTGCACTTGGGCCAAAGGGCCTAAGGTCCACTGGACAGTTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp CACATGCGCACACACGTCCTGTGTTACCACTGGCCAAGGAAACGCGAGTCTCAGGGGTGGTCGCTGCACTaGTCTGGGGGCTGGAGACAG +
Preference number: 4 (lower is better)
Translates to: HMRTHVLCYHWPRKRESQGWSLH*SGGWRQ
Trigger: CTGTCTCCAGCCCCCAGAGCAGTGCAGCGACCACCC...CTGAGACTCGCGTTTCCTTGGCCAGTGGTAACACAGGACGTGTGTGCGCATGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp CGATGCCATTGCAGACCCTCCCACTCCTGCTGGGGTCTTTGTAGAAGAGAAGGGGACCGGAGGCCAGGTTaGCTTGGTGAGCCCCAGGGT +
Preference number: 4 (lower is better)
Translates to: RCHCRPSHSCWGLCRREGDRRPG*LGEPQG
Trigger: ACCCTGGGGCTCACCAAGGCAACCTGGCCTCCGGTC...CCCTTCTCTTCTACAAAGACCCCAGCAGGAGTGGGAGGGTCTGCAATGGCATCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp TCTGCCCTCTGCTGCATGGGCAGCGTGGCTCAGCTAGGGAAACCAAGGCAGAAACACTGGGACTGGACATaGCGCTGGCGACAGGCGAAG +
Preference number: 4 (lower is better)
Translates to: SALCCMGSVAQLGKPRQKHWDWT*RWRQAK
Trigger: CTTCGCCTGTCGCCAGCGGCATGTCCAGTCCCAGTG...TTTCTGCCTTGGTTTCCCTAGCTGAGCCACGCTGCCCATGCAGCAGAGGGCAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp ACAGGGCGATGCCATTGCAGACCCTCCCACTCCTGCTGGGGTCTTTGTAGAAGAGGGAGAAGGAGACGGTaGTGCCCCCACTGGGACTGG +
Preference number: 4 (lower is better)
Translates to: TGRCHCRPSHSCWGLCRRGRRRR*CPHWDW
Trigger: CCAGTCCCAGTGGGGGCAGCACCGTCTCCTTCTCCC...TCTTCTACAAAGACCCCAGCAGGAGTGGGAGGGTCTGCAATGGCATCGCCCTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp AAGAGAAGGGTCTGGCGGCACCCAGGGTCACTAGAGTGCAGGTGCAGGCACCAGTCACTAGAGTGCAGGTaGAGGCACCAGGAGAGAGCC +
Preference number: 4 (lower is better)
Translates to: KRRVWRHPGSLECRCRHQSLECR*RHQERA
Trigger: GGCTCTCTCCTGGTGCCTGCACCTGCACTCTAGTGA...CTGGTGCCTGCACCTGCACTCTAGTGACCCTGGGTGCCGCCAGACCCTTCTCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp GCAGACCCTCCCACTCCTGCTGGGGTCTTTGTAGAAGAGAAGGGTCTGGCGGCAACACTCGCTCAGGCCTaGAGAGTCAGGGACAGCTCC +
Preference number: 4 (lower is better)
Translates to: ADPPTPAGVFVEEKGLAATLAQA*RVRDSS
Trigger: GGAGCTGTCCCTGACTCTGCAGGCCTGAGCGAGTGT...TGCCGCCAGACCCTTCTCTTCTACAAAGACCCCAGCAGGAGTGGGAGGGTCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp GTAGAAGAGAAGGGTCTGGCGGCACCCAGGGTCACTAGAGTGCAGGTGCAGGCAACCCATGTCCCCGCATaGTCACACACTCGCTCAGGC +
Preference number: 4 (lower is better)
Translates to: VEEKGLAAPRVTRVQVQATHVPA*SHTRSG
Trigger: GCCTGAGCGAGTGTGTGAGCATGCGGGGACATGGGT...TGCCTGCACCTGCACTCTAGTGACCCTGGGTGCCGCCAGACCCTTCTCTTCTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp GTGAGGAAGGGAAAAGCGACCGTGAAAGCTGACCCCAGACTCAGTCCTGGGCCCAGGTGTGTGCATGGGTaGACAGCCCGCCGTGACACA +
Preference number: 4 (lower is better)
Translates to: VRKGKATVKADPRLSPGPRCVHG*TARRDT
Trigger: TGTGTCACGGCGGGCTGTGCACCCATGCACACACCT...GGGCCCAGGACTGAGTCTGGGGTCAGCTTTCACGGTCGCTTTTCCCTTCCTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp CCCAACTGTCCAGTGGACCTTAGGCCCTTTGGCCCAAGTGCAAGCCTTCTGCCCTGGGGTCTGCGTCGCTaGGATGTCCATGACTCCCTG +
Preference number: 4 (lower is better)
Translates to: PNCPVDLRPFGPSASLLPWGLRR*DVHDSL
Trigger: CAGGGAGTCATGGACATCGCAGCGACGCAGACCCCA...GGGCAGAAGGCTTGCACTTGGGCCAAAGGGCCTAAGGTCCACTGGACAGTTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp CGCAGGGATGCTGGGAGGGAGTTACCAGCTTTCTGGCATGAATGGGTCCTCCCGCAGCTCATGGTTGGATaGAGGAACGCAGGGGGCAGC +
Preference number: 4 (lower is better)
Translates to: RRDAGRELPAFWHEWVLPQLMVG*RNAGGS
Trigger: GCTGCCCCCTGCGTTCCTCCATCCAACCATGAGCTG...CGGGAGGACCCATTCATGCCAGAAAGCTGGTAACTCCCTCCCAGCATCCCTGCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp GTGAGGAAGGGAAAAGCGACCGTGAAAGCTGACCCCAGACTCAGTCCTGGGCCCGCACCAGCTCATGGTTaGATGGAGGAACGCAGGGGG +
Preference number: 4 (lower is better)
Translates to: VRKGKATVKADPRLSPGPAPAHG*MEERRG
Trigger: CCCCCTGCGTTCCTCCATCCAACCATGAGCTGGTGC...GGGCCCAGGACTGAGTCTGGGGTCAGCTTTCACGGTCGCTTTTCCCTTCCTCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp ATGCGCACACACGTCCTGTGTTACCACTGGCCAAGGAAACGCGAGTCTCAGGATGGCTGGAGGTGGGGCTaGACACTCGGGGTGACCCTG +
Preference number: 4 (lower is better)
Translates to: MRTHVLCYHWPRKRESQDGWRWG*TLGVTL
Trigger: CAGGGTCACCCCGAGTGTCCAGCCCCACCTCCAGCC...ATCCTGAGACTCGCGTTTCCTTGGCCAGTGGTAACACAGGACGTGTGTGCGCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp CATGGGTGCACAGCCCGCCGTGACACAGAAGGGCTCTGGTGCAGGGCCCAGAGGTGTACACAGGTTGCATaGCCTGGTAGATGCGGAGAA +
Preference number: 4 (lower is better)
Translates to: HGCTARRDTEGLWCRAQRCTQVA*PGRCGE
Trigger: TTCTCCGCATCTACCAGGCCATGCAACCTGTGTACA...CCTCTGGGCCCTGCACCAGAGCCCTTCTGTGTCACGGCGGGCTGTGCACCCATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp CCAAGGCAGGACAGGGCGATGCCATTGCAGACCCTCCCACTCCTGCTGGGGTCTGATGACGTCTCGGGCTaGGCTTCGGAACTTCTTGTG +
Preference number: 4 (lower is better)
Translates to: PRQDRAMPLQTLPLLLGSDDVSG*ASELLV
Trigger: CACAAGAAGTTCCGAAGCCCAGCCCGAGACGTCATC...AGACCCCAGCAGGAGTGGGAGGGTCTGCAATGGCATCGCCCTGTCCTGCCTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp AAGAGAAGGGTCTGGCGGCACCCAGGGTCACTAGAGTGCAGGTGCAGGCACCAGCGGTCTTGTCGGTCTTaGTGGAGGCTGTGGAGTTGC +
Preference number: 4 (lower is better)
Translates to: KRRVWRHPGSLECRCRHQRSCRS*WRLWSC
Trigger: GCAACTCCACAGCCTCCACCAAGACCGACAAGACCG...CTGGTGCCTGCACCTGCACTCTAGTGACCCTGGGTGCCGCCAGACCCTTCTCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp GGGCGATGCCATTGCAGACCCTCCCACTCCTGCTGGGGTCTTTGTAGAAGAGAAGACTCAAGGCAGCAGTaGCACTGGAGGCCCCGGGGA +
Preference number: 4 (lower is better)
Translates to: GRCHCRPSHSCWGLCRREDSRQQ*HWRPRG
Trigger: TCCCCGGGGCCTCCAGTGCCACTGCTGCCTTGAGTC...TTCTCTTCTACAAAGACCCCAGCAGGAGTGGGAGGGTCTGCAATGGCATCGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TCTTCTCCCAGACCCTTTCCCATCCCAGCCCATGTTCAAGGCCAGACAGCGCTCCGGGACCTGAGGTGCTaGGTGTGGTACATGGCGCCT +
Preference number: 4 (lower is better)
Translates to: SSPRPFPIPAHVQGQTALRDLRC*VWYMAP
Trigger: AGGCGCCATGTACCACACCCAGCACCTCAGGTCCCG...GAGCGCTGTCTGGCCTTGAACATGGGCTGGGATGGGAAAGGGTCTGGGAGAAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TCTCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGAGCCGAGCCCCCTGCTaGGCGGGACCTGAGGTGCTG +
Preference number: 4 (lower is better)
Translates to: SLLRNWPKVLLLGSRVVRSRAPC*AGPEVL
Trigger: CAGCACCTCAGGTCCCGCCCAGCAGGGGGCTCGGCT...CCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp CCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGCCCTCGGACCGGAGCTaGGGGCAGCTGGGGTTCAGC +
Preference number: 4 (lower is better)
Translates to: PRCTFFSPPKLAQSPPSGPSDRS*GQLGFS
Trigger: GCTGAACCCCAGCTGCCCCCAGCTCCGGTCCGAGGG...CCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TCTCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGCCCTCGGACCGGAGCTaGGGGCAGCTGGGGTTCAGC +
Preference number: 4 (lower is better)
Translates to: SLLRNWPKVLLLGSRVVRPSDRS*GQLGFS
Trigger: GCTGAACCCCAGCTGCCCCCAGCTCCGGTCCGAGGG...CCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp GTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCATGGGTCCCCTCCCCACAAGGGCAGCAGCGGAGGCTaGCTCCAGGTCCAGCATCAG +
Preference number: 4 (lower is better)
Translates to: VLLLGSRVVRIHGSPPHKGSSGG*LQVQHQ
Trigger: CTGATGCTGGACCTGGAGCCAGCCTCCGCTGCTGCC...CTTGTGGGGAGGGGACCCATGAATCCTGACCACTCTTGAACCCAGAAGGAGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp GTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCATGGGTCCCCTCCCCACAAGGGCCCTGGAGGGCTGTaGGTGGTCGGAAGGAAGGCA +
Preference number: 4 (lower is better)
Translates to: VLLLGSRVVRIHGSPPHKGPGGL*VVGRKA
Trigger: TGCCTTCCTTCCGACCACCCACAGCCCTCCAGGGCC...CTTGTGGGGAGGGGACCCATGAATCCTGACCACTCTTGAACCCAGAAGGAGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp CCTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCCTCCCACCCCACTGGGTGGTaGGCTGCTCGGGGAGGTTCC +
Preference number: 4 (lower is better)
Translates to: PLPTLHFLLSSEIGPKSSHPTGW*AARGGS
Trigger: GGAACCTCCCCGAGCAGCCCACCACCCAGTGGGGTG...GGAGGACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp GCAATTCACTTCCCTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCGGGACCGCACCCCACTaGGTGGTGGGCTGCTCGGGG +
Preference number: 4 (lower is better)
Translates to: AIHFPLPTLHFLLSSEIGGTAPH*VVGCSG
Trigger: CCCCGAGCAGCCCACCACCCAGTGGGGTGCGGTCCC...GCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGGGAAGTGAATTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp CCTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCCTCCGGCGTCCGGGGACCCTaGTCACTGCTCTCTCCCGAC +
Preference number: 4 (lower is better)
Translates to: PLPTLHFLLSSEIGPKSSGVRGP*SLLSPD
Trigger: GTCGGGAGAGAGCAGTGACCAGGGTCCCCGGACGCC...GGAGGACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp ATGTCCCACGGTGGCTCTGTTTGGTTTGACAACCTACCCCACAGGTGGCCAGAACCAACAGAGGCTGGGTaGGCGTCCGGGGACCCTGGT +
Preference number: 4 (lower is better)
Translates to: MSHGGSVWFDNLPHRWPEPTEAG*ASGDPG
Trigger: ACCAGGGTCCCCGGACGCCCACCCAGCCTCTGTTGG...TTCTGGCCACCTGTGGGGTAGGTTGTCAAACCAAACAGAGCCACCGTGGGACAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TGGTCAGGTGTTTTCCCAACTGTCCAGTGGACCTTAGGCCCTTTGGCCCAAGTGGACTCCAACAGAGGCTaGGTGGGCGTCCGGGGACCC +
Preference number: 4 (lower is better)
Translates to: WSGVFPTVQWTLGPLAQVDSNRG*VGVRGP
Trigger: GGGTCCCCGGACGCCCACCCAGCCTCTGTTGGAGTC...CACTTGGGCCAAAGGGCCTAAGGTCCACTGGACAGTTGGGAAAACACCTGACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp GAGAAGGGTCTGGCGGCACCCAGGGTCACTAGAGTGCAGGTGCAGGCACCAGGAGAGACAGTGCTACCATaGAAGCCAGTGCCTGGTGGA +
Preference number: 4 (lower is better)
Translates to: EKGLAAPRVTRVQVQAPGETVLP*KPVPGG
Trigger: TCCACCAGGCACTGGCTTCCATGGTAGCACTGTCTC...TCCTGGTGCCTGCACCTGCACTCTAGTGACCCTGGGTGCCGCCAGACCCTTCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp GGCTTCTGGCCAAGGCAGGACAGGGCGATGCCATTGCAGACCCTCCCACTCCTGGAGACAGTGCTACCATaGAAGCCAGTGCCTGGTGGA +
Preference number: 4 (lower is better)
Translates to: GFWPRQDRAMPLQTLPLLETVLP*KPVPGG
Trigger: TCCACCAGGCACTGGCTTCCATGGTAGCACTGTCTC...CAGGAGTGGGAGGGTCTGCAATGGCATCGCCCTGTCCTGCCTTGGCCAGAAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp AAGAGAAGGGTCTGGCGGCACCCAGGGTCACTAGAGTGCAGGTGCAGGCACCAGCACTGCTCTGGGGGCTaGAGACAGTGCTACCATGGA +
Preference number: 4 (lower is better)
Translates to: KRRVWRHPGSLECRCRHQHCSGG*RQCYHG
Trigger: TCCATGGTAGCACTGTCTCCAGCCCCCAGAGCAGTG...CTGGTGCCTGCACCTGCACTCTAGTGACCCTGGGTGCCGCCAGACCCTTCTCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp GTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCATGGGTCCCCTCCCCACAAGCTGGTAGACCCCTGCTaGGTGCCGACACAGGCTGGG +
Preference number: 4 (lower is better)
Translates to: VLLLGSRVVRIHGSPPHKLVDPC*VPTQAG
Trigger: CCCAGCCTGTGTCGGCACCCAGCAGGGGTCTACCAG...CTTGTGGGGAGGGGACCCATGAATCCTGACCACTCTTGAACCCAGAAGGAGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp ACAGGGCGATGCCATTGCAGACCCTCCCACTCCTGCTGGGGTCTTTGTAGAAGACTGGTAGACCCCTGCTaGGTGCCGACACAGGCTGGG +
Preference number: 4 (lower is better)
Translates to: TGRCHCRPSHSCWGLCRRLVDPC*VPTQAG
Trigger: CCCAGCCTGTGTCGGCACCCAGCAGGGGTCTACCAG...TCTTCTACAAAGACCCCAGCAGGAGTGGGAGGGTCTGCAATGGCATCGCCCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TGCAGGCACCAGGAGAGAGCCTCTGTCACCCATAGCTTGGTTGTTTGTCCCTCCCTGGTAGACCCCTGCTaGGTGCCGACACAGGCTGGG +
Preference number: 4 (lower is better)
Translates to: CRHQERASVTHSLVVCPSLVDPC*VPTQAG
Trigger: CCCAGCCTGTGTCGGCACCCAGCAGGGGTCTACCAG...GGAGGGACAAACAACCAAGCTATGGGTGACAGAGGCTCTCTCCTGGTGCCTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TCTTCTCCCAGACCCTTTCCCATCCCAGCCCATGTTCAAGGCCAGACAGCGCTCGACTCCCCGGGGTGGTaGCCACTTTGTTGTGGAGGC +
Preference number: 4 (lower is better)
Translates to: SSPRPFPIPAHVQGQTALDSPGW*PLCCGG
Trigger: GCCTCCACAACAAAGTGGCCACCACCCCGGGGAGTC...GAGCGCTGTCTGGCCTTGAACATGGGCTGGGATGGGAAAGGGTCTGGGAGAAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp GTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCATGGGTCCCCTCCCCACAAGTCTGCCGGGACAGTGTaGGTCTCCGATCCTCCGGGG +
Preference number: 4 (lower is better)
Translates to: VLLLGSRVVRIHGSPPHKSAGTV*VSDPPG
Trigger: CCCCGGAGGATCGGAGACCCACACTGTCCCGGCAGA...CTTGTGGGGAGGGGACCCATGAATCCTGACCACTCTTGAACCCAGAAGGAGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TCTCCTGGCCAGTCTCAGAAGACCCAGGGATCCTCAAAAACCAGGGGAGAAGGACTGGTGACGGGGAGGTaGCAGGGCTGCTCAGGCCAG +
Preference number: 4 (lower is better)
Translates to: SPGQSQKTQGSSKTRGEGLVTGR*QGCSGQ
Trigger: CTGGCCTGAGCAGCCCTGCCACCTCCCCGTCACCAG...TCCTTCTCCCCTGGTTTTTGAGGATCCCTGGGTCTTCTGAGACTGGCCAGGAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TCTGCCCTCTGCTGCATGGGCAGCGTGGCTCAGCTAGGGAAACCAAGGCAGAAAGCGAAGACACCTTCATaGCCAGCCCGTACGCGCCTC +
Preference number: 4 (lower is better)
Translates to: SALCCMGSVAQLGKPRQKAKTPS*PARTRL
Trigger: GAGGCGCGTACGGGCTGGCCATGAAGGTGTCTTCGC...TTTCTGCCTTGGTTTCCCTAGCTGAGCCACGCTGCCCATGCAGCAGAGGGCAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp GAGAAGGGTCTGGCGGCACCCAGGGTCACTAGAGTGCAGGTGCAGGCACCAGGAGCAAGGCAGGGCCAATaGGATGATGGAGTGCTGGTA +
Preference number: 4 (lower is better)
Translates to: EKGLAAPRVTRVQVQAPGARQGQ*DDGVLV
Trigger: TACCAGCACTCCATCATCCCATTGGCCCTGCCTTGC...TCCTGGTGCCTGCACCTGCACTCTAGTGACCCTGGGTGCCGCCAGACCCTTCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp GAGAAGGGTCTGGCGGCACCCAGGGTCACTAGAGTGCAGGTGCAGGCACCAGGAGGTCTGCAGTTGAGTTaGCAGGGCCGGAGCTATCTT +
Preference number: 4 (lower is better)
Translates to: EKGLAAPRVTRVQVQAPGGLQLS*QGRSYL
Trigger: AAGATAGCTCCGGCCCTGCCAACTCAACTGCAGACC...TCCTGGTGCCTGCACCTGCACTCTAGTGACCCTGGGTGCCGCCAGACCCTTCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp CCCAACTGTCCAGTGGACCTTAGGCCCTTTGGCCCAAGTGCAAGCCTTCTGCCCAACGATGGTGGCAGCTaGCGTGGGGTCTGCAGCCAA +
Preference number: 4 (lower is better)
Translates to: PNCPVDLRPFGPSASLLPNDGGS*RGVCSQ
Trigger: TTGGCTGCAGACCCCACGCCAGCTGCCACCATCGTT...GGGCAGAAGGCTTGCACTTGGGCCAAAGGGCCTAAGGTCCACTGGACAGTTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp ATTGGTTGGCCTACAGGCCTCACCTCCCGACTCCCCTCACTGCTGGGCGACATTAACGATGGTGGCAGCTaGCGTGGGGTCTGCAGCCAA +
Preference number: 4 (lower is better)
Translates to: IGWPTGLTSRLPSLLGDINDGGS*RGVCSQ
Trigger: TTGGCTGCAGACCCCACGCCAGCTGCCACCATCGTT...AATGTCGCCCAGCAGTGAGGGGAGTCGGGAGGTGAGGCCTGTAGGCCAACCAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp AAGAGAAGGGTCTGGCGGCACCCAGGGTCACTAGAGTGCAGGTGCAGGCACCAGAGCTCAGCAAAGAGGTaGCAGGCGTTGTCCGTGGTG +
Preference number: 4 (lower is better)
Translates to: KRRVWRHPGSLECRCRHQSSAKR*QALSVV
Trigger: CACCACGGACAACGCCTGCCACCTCTTTGCTGAGCT...CTGGTGCCTGCACCTGCACTCTAGTGACCCTGGGTGCCGCCAGACCCTTCTCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp GCAGACCCTCCCACTCCTGCTGGGGTCTTTGTAGAAGAGAAGGGTCTGGCGGCAATGGCAGAGGCCGGCTaGTTGGGGTCAAGCTCAGCA +
Preference number: 4 (lower is better)
Translates to: ADPPTPAGVFVEEKGLAAMAEAG*LGSSSA
Trigger: TGCTGAGCTTGACCCCAACCAGCCGGCCTCTGCCAT...TGCCGCCAGACCCTTCTCTTCTACAAAGACCCCAGCAGGAGTGGGAGGGTCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp CTGGACAGCTGGTGGCAGCACGGGACTGAACCTGCTGGGGTCTGCGTCGCTGCGAACCTACCCCACAGGTaGCCAGAAAAAGATTCTCCC +
Preference number: 4 (lower is better)
Translates to: LDSWWQHGTEPAGVCVAANLPHR*PEKDSP
Trigger: GGGAGAATCTTTTTCTGGCCACCTGTGGGGTAGGTT...CGCAGCGACGCAGACCCCAGCAGGTTCAGTCCCGTGCTGCCACCAGCTGTCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp CGCAGGGATGCTGGGAGGGAGTTACCAGCTTTCTGGCATGAATGGGTCCTCCCGCTGAGCCACATGCCTTaGGGAAGACACCCCGAGCTC +
Preference number: 4 (lower is better)
Translates to: RRDAGRELPAFWHEWVLPLSHMP*GRHPEL
Trigger: GAGCTCGGGGTGTCTTCCCCAAGGCATGTGGCTCAG...CGGGAGGACCCATTCATGCCAGAAAGCTGGTAACTCCCTCCCAGCATCCCTGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp GCAGACCCTCCCACTCCTGCTGGGGTCTTTGTAGAAGAGAAGGGTCTGGCGGCACTGAGCCACATGCCTTaGGGAAGACACCCCGAGCTC +
Preference number: 4 (lower is better)
Translates to: ADPPTPAGVFVEEKGLAALSHMP*GRHPEL
Trigger: GAGCTCGGGGTGTCTTCCCCAAGGCATGTGGCTCAG...TGCCGCCAGACCCTTCTCTTCTACAAAGACCCCAGCAGGAGTGGGAGGGTCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp GTAGAAGAGAAGGGTCTGGCGGCACCCAGGGTCACTAGAGTGCAGGTGCAGGCAAAGGGGGCCAAAGGCTaGGACATGTGCAACCCCTCC +
Preference number: 4 (lower is better)
Translates to: VEEKGLAAPRVTRVQVQAKGAKG*DMCNPS
Trigger: GGAGGGGTTGCACATGTCCCAGCCTTTGGCCCCCTT...TGCCTGCACCTGCACTCTAGTGACCCTGGGTGCCGCCAGACCCTTCTCTTCTAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TTCCTTCGCAGGTCCCCTCTCCATTGTTTTCTCGCCCAATCCTTCCCTCTTGCTGCAGGGGGTGGCCAGTaGGGCCTCTGCCCCTGCTCT +
Preference number: 4 (lower is better)
Translates to: FLRRSPLHCFLAQSFPLAAGGGQ*GLCPCS
Trigger: AGAGCAGGGGCAGAGGCCCCACTGGCCACCCCCTGC...AGCAAGAGGGAAGGATTGGGCGAGAAAACAATGGAGAGGGGACCTGCGAAGGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TCTGCCCTCTGCTGCATGGGCAGCGTGGCTCAGCTAGGGAAACCAAGGCAGAAACCCTTCTGTGCCCCCTaGACAGCATGCTCCCCTGGA +
Preference number: 4 (lower is better)
Translates to: SALCCMGSVAQLGKPRQKPFCAP*TACSPG
Trigger: TCCAGGGGAGCATGCTGTCCAGGGGGCACAGAAGGG...TTTCTGCCTTGGTTTCCCTAGCTGAGCCACGCTGCCCATGCAGCAGAGGGCAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp GTAGAAGAGAAGGGTCTGGCGGCACCCAGGGTCACTAGAGTGCAGGTGCAGGCACAGGATTCCAGGGCCTaGACCTGGGGTAAAGGGCTG +
Preference number: 4 (lower is better)
Translates to: VEEKGLAAPRVTRVQVQAQDSRA*TWGKGL
Trigger: CAGCCCTTTACCCCAGGTCCAGGCCCTGGAATCCTG...TGCCTGCACCTGCACTCTAGTGACCCTGGGTGCCGCCAGACCCTTCTCTTCTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp CCCAACTGTCCAGTGGACCTTAGGCCCTTTGGCCCAAGTGCAAGCCTTCTGCCCCAGGATTCCAGGGCCTaGACCTGGGGTAAAGGGCTG +
Preference number: 4 (lower is better)
Translates to: PNCPVDLRPFGPSASLLPQDSRA*TWGKGL
Trigger: CAGCCCTTTACCCCAGGTCCAGGCCCTGGAATCCTG...GGGCAGAAGGCTTGCACTTGGGCCAAAGGGCCTAAGGTCCACTGGACAGTTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp GTGAGGAAGGGAAAAGCGACCGTGAAAGCTGACCCCAGACTCAGTCCTGGGCCCTGGCATGGAGCTTCGTaGTGTCAGGTCTCCGCTCAG +
Preference number: 4 (lower is better)
Translates to: VRKGKATVKADPRLSPGPWHGAS*CQVSAQ
Trigger: CTGAGCGGAGACCTGACATCACGAAGCTCCATGCCA...GGGCCCAGGACTGAGTCTGGGGTCAGCTTTCACGGTCGCTTTTCCCTTCCTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp GAGAAGGGTCTGGCGGCACCCAGGGTCACTAGAGTGCAGGTGCAGGCACCAGGAGCTTGTTGTTCATTTTaGTGGAGCCGGAGAGCAGGC +
Preference number: 4 (lower is better)
Translates to: EKGLAAPRVTRVQVQAPGACCSF*WSRRAG
Trigger: GCCTGCTCTCCGGCTCCATCAAAATGAACAACAAGC...TCCTGGTGCCTGCACCTGCACTCTAGTGACCCTGGGTGCCGCCAGACCCTTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp GGGGAAGACACCCCGAGCTCAACAGCTGCCTGTTCTGACAGATCTCTTCCTATGCTGCTGGGCGGGACCTaGGGTGCTGGGTGTGGTACA +
Preference number: 4 (lower is better)
Translates to: GEDTPSSTAACSDRSLPMLLGGT*GAGCGT
Trigger: TGTACCACACCCAGCACCTCAGGTCCCGCCCAGCAG...CATAGGAAGAGATCTGTCAGAACAGGCAGCTGTTGAGCTCGGGGTGTCTTCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp GGCTTCTGGCCAAGGCAGGACAGGGCGATGCCATTGCAGACCCTCCCACTCCTGGCTTCCGAAAAGGATTaGGAGCGGAACATACCGCTG +
Preference number: 4 (lower is better)
Translates to: GFWPRQDRAMPLQTLPLLASEKD*ERNIPL
Trigger: CAGCGGTATGTTCCGCTCTCAATCCTTTTCGGAAGC...CAGGAGTGGGAGGGTCTGCAATGGCATCGCCCTGTCCTGCCTTGGCCAGAAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp GTGAGGAAGGGAAAAGCGACCGTGAAAGCTGACCCCAGACTCAGTCCTGGGCCCATGTCCGCTGGGTTGTaGGGTTTCAGGCCCAGAGCA +
Preference number: 4 (lower is better)
Translates to: VRKGKATVKADPRLSPGPMSAGL*GFRPRA
Trigger: TGCTCTGGGCCTGAAACCTCACAACCCAGCGGACAT...GGGCCCAGGACTGAGTCTGGGGTCAGCTTTCACGGTCGCTTTTCCCTTCCTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp TGGTCAGGTGTTTTCCCAACTGTCCAGTGGACCTTAGGCCCTTTGGCCCAAGTGTTGGGCTCAGAGTCCTaGGCTCGGGGTCCAGCCACC +
Preference number: 4 (lower is better)
Translates to: WSGVFPTVQWTLGPLAQVLGSES*ARGPAT
Trigger: GGTGGCTGGACCCCGAGCTCAGGACTCTGAGCCCAA...CACTTGGGCCAAAGGGCCTAAGGTCCACTGGACAGTTGGGAAAACACCTGACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp GTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCATGGGTCCCCTCCCCACAAGCTGTCCCAGGCTGCCTaGGCGGAAGCCAGACTCCAA +
Preference number: 4 (lower is better)
Translates to: VLLLGSRVVRIHGSPPHKLSQAA*AEARLQ
Trigger: TTGGAGTCTGGCTTCCGCTCAGGCAGCCTGGGACAG...CTTGTGGGGAGGGGACCCATGAATCCTGACCACTCTTGAACCCAGAAGGAGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp TGCAGGCACCAGGAGAGAGCCTCTGTCACCCATAGCTTGGTTGTTTGTCCCTCCCTGTCCCAGGCTGCCTaGGCGGAAGCCAGACTCCAA +
Preference number: 4 (lower is better)
Translates to: CRHQERASVTHSLVVCPSLSQAA*AEARLQ
Trigger: TTGGAGTCTGGCTTCCGCTCAGGCAGCCTGGGACAG...GGAGGGACAAACAACCAAGCTATGGGTGACAGAGGCTCTCTCCTGGTGCCTGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp TCTGCCCTCTGCTGCATGGGCAGCGTGGCTCAGCTAGGGAAACCAAGGCAGAAACCAGCCACACTGAACTaGGCTCGAGCCTGGCTTTCC +
Preference number: 4 (lower is better)
Translates to: SALCCMGSVAQLGKPRQKPATLN*ARAWLS
Trigger: GGAAAGCCAGGCTCGAGCTCAGTTCAGTGTGGCTGG...TTTCTGCCTTGGTTTCCCTAGCTGAGCCACGCTGCCCATGCAGCAGAGGGCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp TCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATGTTCTGTGGCGCGCCTaGGGGCTCCCAGGCACCGTG +
Preference number: 4 (lower is better)
Translates to: SPPKLAQSPPSGFKSGQDVLWRA*GLPGTV
Trigger: CACGGTGCCTGGGAGCCCTCAGGCGCGCCACAGAAC...ATCCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp ATGCGCACACACGTCCTGTGTTACCACTGGCCAAGGAAACGCGAGTCTCAGGATCAGCCATGCTGGGATTaGTGGCCCGCCAGCCGAAGC +
Preference number: 4 (lower is better)
Translates to: MRTHVLCYHWPRKRESQDQPCWD*WPASRS
Trigger: GCTTCGGCTGGCGGGCCATCAATCCCAGCATGGCTG...ATCCTGAGACTCGCGTTTCCTTGGCCAGTGGTAACACAGGACGTGTGTGCGCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp CCCAGCTTGATTTCCCCTTGCAAAGCAGTTGAGTTAGGGAGACAGAGCTTTTCCGCCAGGTTGCCTTGGTaGGCCCCAGGGTGCCGGCCC +
Preference number: 4 (lower is better)
Translates to: PSLISPCKAVELGRQSFSARLPW*APGCRP
Trigger: GGGCCGGCACCCTGGGGCTCACCAAGGCAACCTGGC...GGAAAAGCTCTGTCTCCCTAACTCAACTGCTTTGCAAGGGGAAATCAAGCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp CGCAGGGATGCTGGGAGGGAGTTACCAGCTTTCTGGCATGAATGGGTCCTCCCGGGTCTCGGTTTGGAATaGCCAGCTTGCAAGGCAGGG +
Preference number: 4 (lower is better)
Translates to: RRDAGRELPAFWHEWVLPGLGLE*PACKAG
Trigger: CCCTGCCTTGCAAGCTGGTCATTCCAAACCGAGACC...CGGGAGGACCCATTCATGCCAGAAAGCTGGTAACTCCCTCCCAGCATCCCTGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp GGCTTCTGGCCAAGGCAGGACAGGGCGATGCCATTGCAGACCCTCCCACTCCTGCCATGTCCACAGAGTTaGCGAAGAGCACATTGCAGG +
Preference number: 4 (lower is better)
Translates to: GFWPRQDRAMPLQTLPLLPCPQS*RRAHCR
Trigger: CCTGCAATGTGCTCTTCGTCAACTCTGTGGACATGG...CAGGAGTGGGAGGGTCTGCAATGGCATCGCCCTGTCCTGCCTTGGCCAGAAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp GAGAAGGGTCTGGCGGCACCCAGGGTCACTAGAGTGCAGGTGCAGGCACCAGGATGGCTCTGTTTGGTTTaGCAACCTACCCCACAGGTG +
Preference number: 4 (lower is better)
Translates to: EKGLAAPRVTRVQVQAPGWLCLV*QPTPQV
Trigger: CACCTGTGGGGTAGGTTGTCAAACCAAACAGAGCCA...TCCTGGTGCCTGCACCTGCACTCTAGTGACCCTGGGTGCCGCCAGACCCTTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp GAGAAGGGTCTGGCGGCACCCAGGGTCACTAGAGTGCAGGTGCAGGCACCAGGAACAAGTTCTTCCACTTaGTGTCCCACGGTGGCTCTG +
Preference number: 4 (lower is better)
Translates to: EKGLAAPRVTRVQVQAPGTSSST*CPTVAL
Trigger: CAGAGCCACCGTGGGACATCAAGTGGAAGAACTTGT...TCCTGGTGCCTGCACCTGCACTCTAGTGACCCTGGGTGCCGCCAGACCCTTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp ACAGGGCGATGCCATTGCAGACCCTCCCACTCCTGCTGGGGTCTTTGTAGAAGAACACATCCTGGGAGCTaGCTGCTGGGCCCCTGGCTT +
Preference number: 4 (lower is better)
Translates to: TGRCHCRPSHSCWGLCRRTHPGS*LLGPWL
Trigger: AAGCCAGGGGCCCAGCAGTCAGCTCCCAGGATGTGT...TCTTCTACAAAGACCCCAGCAGGAGTGGGAGGGTCTGCAATGGCATCGCCCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp CGCAGGGATGCTGGGAGGGAGTTACCAGCTTTCTGGCATGAATGGGTCCTCCCGGGGTTTGCTAGGGAATaGGGAGAGGGGGAAACCCAG +
Preference number: 4 (lower is better)
Translates to: RRDAGRELPAFWHEWVLPGFARE*GEGETQ
Trigger: CTGGGTTTCCCCCTCTCCTCATTCCCTAGCAAACCC...CGGGAGGACCCATTCATGCCAGAAAGCTGGTAACTCCCTCCCAGCATCCCTGCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp ACAGGGCGATGCCATTGCAGACCCTCCCACTCCTGCTGGGGTCTTTGTAGAAGAGGCTGTGGTGGGTGGTaGGGAAGGGAAAAGCGACCG +
Preference number: 4 (lower is better)
Translates to: TGRCHCRPSHSCWGLCRRGCGGW*GREKRP
Trigger: CGGTCGCTTTTCCCTTCCTCACCACCCACCACAGCC...TCTTCTACAAAGACCCCAGCAGGAGTGGGAGGGTCTGCAATGGCATCGCCCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp GGGGAAGACACCCCGAGCTCAACAGCTGCCTGTTCTGACAGATCTCTTCCTATGGTGCACAGCCCGCCGTaGCACAGAAGGGCTCTGGTG +
Preference number: 4 (lower is better)
Translates to: GEDTPSSTAACSDRSLPMVHSPP*HRRALV
Trigger: CACCAGAGCCCTTCTGTGTCACGGCGGGCTGTGCAC...CATAGGAAGAGATCTGTCAGAACAGGCAGCTGTTGAGCTCGGGGTGTCTTCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp TGGTCAGGTGTTTTCCCAACTGTCCAGTGGACCTTAGGCCCTTTGGCCCAAGTGGTGGCAGCACGGGACTaGACCTGCTGGGGTCTGCGT +
Preference number: 4 (lower is better)
Translates to: WSGVFPTVQWTLGPLAQVVAARD*TCWGLR
Trigger: ACGCAGACCCCAGCAGGTTCAGTCCCGTGCTGCCAC...CACTTGGGCCAAAGGGCCTAAGGTCCACTGGACAGTTGGGAAAACACCTGACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp AAGAGAAGGGTCTGGCGGCACCCAGGGTCACTAGAGTGCAGGTGCAGGCACCAGTTGGACTTGAGCATCTaGGCCACCTCACGGAGGTTG +
Preference number: 4 (lower is better)
Translates to: KRRVWRHPGSLECRCRHQLDLSI*ATSRRL
Trigger: CAACCTCCGTGAGGTGGCGCAGATGCTCAAGTCCAA...CTGGTGCCTGCACCTGCACTCTAGTGACCCTGGGTGCCGCCAGACCCTTCTCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp GGCTTCTGGCCAAGGCAGGACAGGGCGATGCCATTGCAGACCCTCCCACTCCTGTGGCCTTACAGATGCTaGAGATCTTCTCCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: GFWPRQDRAMPLQTLPLLWPYRC*RSSPGL
Trigger: CAGCCCTGGAGAAGATCTGCAGCATCTGTAAGGCCA...CAGGAGTGGGAGGGTCTGCAATGGCATCGCCCTGTCCTGCCTTGGCCAGAAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp CTGGACAGCTGGTGGCAGCACGGGACTGAACCTGCTGGGGTCTGCGTCGCTGCGCACTGGCAGAAATGTTaGTGTAGTGCATGTAAGCCG +
Preference number: 4 (lower is better)
Translates to: LDSWWQHGTEPAGVCVAAHWQKC*CSACKP
Trigger: CGGCTTACATGCACTACAGCAACATTTCTGCCAGTG...CGCAGCGACGCAGACCCCAGCAGGTTCAGTCCCGTGCTGCCACCAGCTGTCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp CATGGGTGCACAGCCCGCCGTGACACAGAAGGGCTCTGGTGCAGGGCCCAGAGGTGCATGATCACGTGGTaGAGAAACAAGGGCTTGTTG +
Preference number: 4 (lower is better)
Translates to: HGCTARRDTEGLWCRAQRCMITW*RNKGLL
Trigger: CAACAAGCCCTTGTTTCTGCACCACGTGATCATGCA...CCTCTGGGCCCTGCACCAGAGCCCTTCTGTGTCACGGCGGGCTGTGCACCCATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp GGCTTCTGGCCAAGGCAGGACAGGGCGATGCCATTGCAGACCCTCCCACTCCTGAAGTTGGGGATGCCGTaGATGATCACGTGGTGCAGA +
Preference number: 4 (lower is better)
Translates to: GFWPRQDRAMPLQTLPLLKLGMP*MITWCR
Trigger: TCTGCACCACGTGATCATGCACGGCATCCCCAACTT...CAGGAGTGGGAGGGTCTGCAATGGCATCGCCCTGTCCTGCCTTGGCCAGAAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp AAGAGAAGGGTCTGGCGGCACCCAGGGTCACTAGAGTGCAGGTGCAGGCACCAGGCATGGCCTGGTAGATaGGGAGAAATGGCCGACATC +
Preference number: 4 (lower is better)
Translates to: KRRVWRHPGSLECRCRHQAWPGR*GEMADI
Trigger: GATGTCGGCCATTTCTCCGCATCTACCAGGCCATGC...CTGGTGCCTGCACCTGCACTCTAGTGACCCTGGGTGCCGCCAGACCCTTCTCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp CCAAGGCAGGACAGGGCGATGCCATTGCAGACCCTCCCACTCCTGCTGGGGTCTGCACAGGTGTGGAACTaGACACGGAAGATGACGTCT +
Preference number: 4 (lower is better)
Translates to: PRQDRAMPLQTLPLLLGSAQVWN*TRKMTS
Trigger: AGACGTCATCTTCCGTGTGCAGTTCCACACCTGTGC...AGACCCCAGCAGGAGTGGGAGGGTCTGCAATGGCATCGCCCTGTCCTGCCTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp CCAAGGCAGGACAGGGCGATGCCATTGCAGACCCTCCCACTCCTGCTGGGGTCTTGGTACATGGCGCCTTaGTTCTCTCGCTCTAAGCCA +
Preference number: 4 (lower is better)
Translates to: PRQDRAMPLQTLPLLLGSWYMAP*FSRSKP
Trigger: TGGCTTAGAGCGAGAGAAGCAAGGCGCCATGTACCA...AGACCCCAGCAGGAGTGGGAGGGTCTGCAATGGCATCGCCCTGTCCTGCCTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp GCAATTCACTTCCCTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCGCACAGCCTCCCGGCTaGTTCCCCCTCGGACCGGAG +
Preference number: 4 (lower is better)
Translates to: AIHFPLPTLHFLLSSEIGAQPPG*FPLGPE
Trigger: CTCCGGTCCGAGGGGGAAGCAGCCGGGAGGCTGTGC...GCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGGGAAGTGAATTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp AAGAGAAGGGTCTGGCGGCACCCAGGGTCACTAGAGTGCAGGTGCAGGCACCAGGAATTCAGTCCCCTTTaGACAGCCTCCCGGCTGCTT +
Preference number: 4 (lower is better)
Translates to: KRRVWRHPGSLECRCRHQEFSPL*TASRLL
Trigger: AAGCAGCCGGGAGGCTGTGCAAAGGGGACTGAATTC...CTGGTGCCTGCACCTGCACTCTAGTGACCCTGGGTGCCGCCAGACCCTTCTCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp TCTTCTCCCAGACCCTTTCCCATCCCAGCCCATGTTCAAGGCCAGACAGCGCTCAAGTGGGCTCTTTCCTaGTGGCGTGGAGGTGGGCGA +
Preference number: 4 (lower is better)
Translates to: SSPRPFPIPAHVQGQTALKWALS*WRGGGR
Trigger: TCGCCCACCTCCACGCCAGCAGGAAAGAGCCCACTT...GAGCGCTGTCTGGCCTTGAACATGGGCTGGGATGGGAAAGGGTCTGGGAGAAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp GGGGAAGACACCCCGAGCTCAACAGCTGCCTGTTCTGACAGATCTCTTCCTATGCTCCTGCTGGGAGGCTaGTCGCGGGAACTCAGGGAG +
Preference number: 4 (lower is better)
Translates to: GEDTPSSTAACSDRSLPMLLLGG*SRELRE
Trigger: CTCCCTGAGTTCCCGCGAGCAGCCTCCCAGCAGGAG...CATAGGAAGAGATCTGTCAGAACAGGCAGCTGTTGAGCTCGGGGTGTCTTCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp TCTCCTGGCCAGTCTCAGAAGACCCAGGGATCCTCAAAAACCAGGGGAGAAGGACTCCTGCTGGGAGGCTaGTCGCGGGAACTCAGGGAG +
Preference number: 4 (lower is better)
Translates to: SPGQSQKTQGSSKTRGEGLLLGG*SRELRE
Trigger: CTCCCTGAGTTCCCGCGAGCAGCCTCCCAGCAGGAG...TCCTTCTCCCCTGGTTTTTGAGGATCCCTGGGTCTTCTGAGACTGGCCAGGAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp GAGAAGGGTCTGGCGGCACCCAGGGTCACTAGAGTGCAGGTGCAGGCACCAGGAAAGGTGAGTAAGACCTaGCAGGAGGGACAGACTCCA +
Preference number: 4 (lower is better)
Translates to: EKGLAAPRVTRVQVQAPGKVSKT*QEGQTP
Trigger: TGGAGTCTGTCCCTCCTGGCAGGTCTTACTCACCTT...TCCTGGTGCCTGCACCTGCACTCTAGTGACCCTGGGTGCCGCCAGACCCTTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp CCTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCCTCCGGGGGCTCTGCAGGCTaGTTCTCCCGAGCCTGTACC +
Preference number: 4 (lower is better)
Translates to: PLPTLHFLLSSEIGPKSSGGSAG*FSRACT
Trigger: GGTACAGGCTCGGGAGAAGCAGCCTGCAGAGCCCCC...GGAGGACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp GCAGACCCTCCCACTCCTGCTGGGGTCTTTGTAGAAGAGAAGGGTCTGGCGGCAAGCCACCGCTGTCCGTaGCACAGACTCCACATAGCT +
Preference number: 4 (lower is better)
Translates to: ADPPTPAGVFVEEKGLAASHRCP*HRLHIA
Trigger: AGCTATGTGGAGTCTGTGGCACGGACAGCGGTGGCT...TGCCGCCAGACCCTTCTCTTCTACAAAGACCCCAGCAGGAGTGGGAGGGTCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp GTAGAAGAGAAGGGTCTGGCGGCACCCAGGGTCACTAGAGTGCAGGTGCAGGCAAGCCACCGCTGTCCGTaGCACAGACTCCACATAGCT +
Preference number: 4 (lower is better)
Translates to: VEEKGLAAPRVTRVQVQASHRCP*HRLHIA
Trigger: AGCTATGTGGAGTCTGTGGCACGGACAGCGGTGGCT...TGCCTGCACCTGCACTCTAGTGACCCTGGGTGCCGCCAGACCCTTCTCTTCTAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp TCTTCTCCCAGACCCTTTCCCATCCCAGCCCATGTTCAAGGCCAGACAGCGCTCGGCTGCTGTAGCTACTaGCCACAGTCGGGAGAGGAG +
Preference number: 4 (lower is better)
Translates to: SSPRPFPIPAHVQGQTALGCCSY*PQSGEE
Trigger: CTCCTCTCCCGACTGTGGGCAGTAGCTACAGCAGCC...GAGCGCTGTCTGGCCTTGAACATGGGCTGGGATGGGAAAGGGTCTGGGAGAAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp GGCTTCTGGCCAAGGCAGGACAGGGCGATGCCATTGCAGACCCTCCCACTCCTGTACCATGGAAGCCAGTaGCTGGTGGACCCATCATCT +
Preference number: 4 (lower is better)
Translates to: GFWPRQDRAMPLQTLPLLYHGSQ*LVDPSS
Trigger: AGATGATGGGTCCACCAGGCACTGGCTTCCATGGTA...CAGGAGTGGGAGGGTCTGCAATGGCATCGCCCTGTCCTGCCTTGGCCAGAAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp CCAAGGCAGGACAGGGCGATGCCATTGCAGACCCTCCCACTCCTGCTGGGGTCTTACCATGGAAGCCAGTaGCTGGTGGACCCATCATCT +
Preference number: 4 (lower is better)
Translates to: PRQDRAMPLQTLPLLLGSYHGSQ*LVDPSS
Trigger: AGATGATGGGTCCACCAGGCACTGGCTTCCATGGTA...AGACCCCAGCAGGAGTGGGAGGGTCTGCAATGGCATCGCCCTGTCCTGCCTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp CCTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCCTCCGGGTGGTCGCTGCACTaGTCTGGGGGCTGGAGACAG +
Preference number: 4 (lower is better)
Translates to: PLPTLHFLLSSEIGPKSSGWSLH*SGGWRQ
Trigger: CTGTCTCCAGCCCCCAGAGCAGTGCAGCGACCACCC...GGAGGACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp ATGTCCCACGGTGGCTCTGTTTGGTTTGACAACCTACCCCACAGGTGGCCAGAAGGGTGGTCGCTGCACTaGTCTGGGGGCTGGAGACAG +
Preference number: 4 (lower is better)
Translates to: MSHGGSVWFDNLPHRWPEGWSLH*SGGWRQ
Trigger: CTGTCTCCAGCCCCCAGAGCAGTGCAGCGACCACCC...TTCTGGCCACCTGTGGGGTAGGTTGTCAAACCAAACAGAGCCACCGTGGGACAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp GGCTTCTGGCCAAGGCAGGACAGGGCGATGCCATTGCAGACCCTCCCACTCCTGGGCTGGCTATTGCATTaGTATGAAGACCGGAGGCCA +
Preference number: 4 (lower is better)
Translates to: GFWPRQDRAMPLQTLPLLGWLLH*YEDRRP
Trigger: TGGCCTCCGGTCTTCATAGCAATGCAATAGCCAGCC...CAGGAGTGGGAGGGTCTGCAATGGCATCGCCCTGTCCTGCCTTGGCCAGAAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp CGATGCCATTGCAGACCCTCCCACTCCTGCTGGGGTCTTTGTAGAAGAGAAGGGGGTCCAAGCAGGGGCTaGCGGGAACCACAGATCCAG +
Preference number: 4 (lower is better)
Translates to: RCHCRPSHSCWGLCRREGGPSRG*REPQIQ
Trigger: CTGGATCTGTGGTTCCCGGCAGCCCCTGCTTGGACC...CCCTTCTCTTCTACAAAGACCCCAGCAGGAGTGGGAGGGTCTGCAATGGCATCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp GGGCGATGCCATTGCAGACCCTCCCACTCCTGCTGGGGTCTTTGTAGAAGAGAACCAGAGGCACTGCTCTaGCGGGACAGTGTGGGTCTC +
Preference number: 4 (lower is better)
Translates to: GRCHCRPSHSCWGLCRREPEALL*RDSVGL
Trigger: GAGACCCACACTGTCCCGGCAGAGCAGTGCCTCTGG...TTCTCTTCTACAAAGACCCCAGCAGGAGTGGGAGGGTCTGCAATGGCATCGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp ACAGGGCGATGCCATTGCAGACCCTCCCACTCCTGCTGGGGTCTTTGTAGAAGACCAGAGGCACTGCTCTaGCGGGACAGTGTGGGTCTC +
Preference number: 4 (lower is better)
Translates to: TGRCHCRPSHSCWGLCRRPEALL*RDSVGL
Trigger: GAGACCCACACTGTCCCGGCAGAGCAGTGCCTCTGG...TCTTCTACAAAGACCCCAGCAGGAGTGGGAGGGTCTGCAATGGCATCGCCCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp GTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCATGGGTCCCCTCCCCACAAGGGTGTTGGGCTCCCTTaGCGGAAGGCTGCGGAGTCT +
Preference number: 4 (lower is better)
Translates to: VLLLGSRVVRIHGSPPHKGVGLP*RKAAES
Trigger: AGACTCCGCAGCCTTCCGGCAAGGGAGCCCAACACC...CTTGTGGGGAGGGGACCCATGAATCCTGACCACTCTTGAACCCAGAAGGAGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp GGGCGATGCCATTGCAGACCCTCCCACTCCTGCTGGGGTCTTTGTAGAAGAGAAGGTGTTGGGCTCCCTTaGCGGAAGGCTGCGGAGTCT +
Preference number: 4 (lower is better)
Translates to: GRCHCRPSHSCWGLCRREGVGLP*RKAAES
Trigger: AGACTCCGCAGCCTTCCGGCAAGGGAGCCCAACACC...TTCTCTTCTACAAAGACCCCAGCAGGAGTGGGAGGGTCTGCAATGGCATCGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp GTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCATGGGTCCCCTCCCCACAAGCATAGTTGGGGAGGCTaGCTGCCCGGTCTCCCACTG +
Preference number: 4 (lower is better)
Translates to: VLLLGSRVVRIHGSPPHKHSWGG*LPGLPL
Trigger: CAGTGGGAGACCGGGCAGGCAGCCTCCCCAACTATG...CTTGTGGGGAGGGGACCCATGAATCCTGACCACTCTTGAACCCAGAAGGAGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp CATGGGTGCACAGCCCGCCGTGACACAGAAGGGCTCTGGTGCAGGGCCCAGAGGGTCTCTATCAGAAAATaGCTGACCAGCTCATGGGTC +
Preference number: 4 (lower is better)
Translates to: HGCTARRDTEGLWCRAQRVSIRK*LTSSWV
Trigger: GACCCATGAGCTGGTCAGGCATTTTCTGATAGAGAC...CCTCTGGGCCCTGCACCAGAGCCCTTCTGTGTCACGGCGGGCTGTGCACCCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp CTGGACAGCTGGTGGCAGCACGGGACTGAACCTGCTGGGGTCTGCGTCGCTGCGGTCTCTATCAGAAAATaGCTGACCAGCTCATGGGTC +
Preference number: 4 (lower is better)
Translates to: LDSWWQHGTEPAGVCVAAVSIRK*LTSSWV
Trigger: GACCCATGAGCTGGTCAGGCATTTTCTGATAGAGAC...CGCAGCGACGCAGACCCCAGCAGGTTCAGTCCCGTGCTGCCACCAGCTGTCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp GCAGACCCTCCCACTCCTGCTGGGGTCTTTGTAGAAGAGAAGGGTCTGGCGGCAAGCTGGCGTGGGGTCTaGAGCCAACGTCTCAGATGT +
Preference number: 4 (lower is better)
Translates to: ADPPTPAGVFVEEKGLAASWRGV*SQRLRC
Trigger: ACATCTGAGACGTTGGCTGCAGACCCCACGCCAGCT...TGCCGCCAGACCCTTCTCTTCTACAAAGACCCCAGCAGGAGTGGGAGGGTCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp CTGGACAGCTGGTGGCAGCACGGGACTGAACCTGCTGGGGTCTGCGTCGCTGCGGAGGCTTTGGGTTTTTaGAGTTTCCATCTACCCAGG +
Preference number: 4 (lower is better)
Translates to: LDSWWQHGTEPAGVCVAAEALGF*SFHLPR
Trigger: CCTGGGTAGATGGAAACTGCAAAAACCCAAAGCCTC...CGCAGCGACGCAGACCCCAGCAGGTTCAGTCCCGTGCTGCCACCAGCTGTCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp ATTGGTTGGCCTACAGGCCTCACCTCCCGACTCCCCTCACTGCTGGGCGACATTTCACTAGAGTGCAGGTaGAGGCACCAGGAGAGAGCC +
Preference number: 4 (lower is better)
Translates to: IGWPTGLTSRLPSLLGDISLECR*RHQERA
Trigger: GGCTCTCTCCTGGTGCCTGCACCTGCACTCTAGTGA...AATGTCGCCCAGCAGTGAGGGGAGTCGGGAGGTGAGGCCTGTAGGCCAACCAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp CCCAACTGTCCAGTGGACCTTAGGCCCTTTGGCCCAAGTGCAAGCCTTCTGCCCTCACTAGAGTGCAGGTaGAGGCACCAGGAGAGAGCC +
Preference number: 4 (lower is better)
Translates to: PNCPVDLRPFGPSASLLPSLECR*RHQERA
Trigger: GGCTCTCTCCTGGTGCCTGCACCTGCACTCTAGTGA...GGGCAGAAGGCTTGCACTTGGGCCAAAGGGCCTAAGGTCCACTGGACAGTTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp GTGAGGAAGGGAAAAGCGACCGTGAAAGCTGACCCCAGACTCAGTCCTGGGCCCCAAGTGCAAGCCTTCTaGCCTCTGCTGCATGGGCAG +
Preference number: 4 (lower is better)
Translates to: VRKGKATVKADPRLSPGPQVQAF*PLLHGQ
Trigger: CTGCCCATGCAGCAGAGGGCAGAAGGCTTGCACTTG...GGGCCCAGGACTGAGTCTGGGGTCAGCTTTCACGGTCGCTTTTCCCTTCCTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp GCTATCGCTGAGACTCCACCAATTGGTTGGCCTACAGGCCTCACCTCCCGACTCACACTCGCTCAGGCCTaGAGAGTCAGGGACAGCTCC +
Preference number: 4 (lower is better)
Translates to: AIAETPPIGWPTGLTSRLTLAQA*RVRDSS
Trigger: GGAGCTGTCCCTGACTCTGCAGGCCTGAGCGAGTGT...GAGTCGGGAGGTGAGGCCTGTAGGCCAACCAATTGGTGGAGTCTCAGCGATAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp TGCAGGCACCAGGAGAGAGCCTCTGTCACCCATAGCTTGGTTGTTTGTCCCTCCTGGAGGGGCTGGCCATaGATGCAAGGTGGGCTGTGG +
Preference number: 4 (lower is better)
Translates to: CRHQERASVTHSLVVCPSWRGWP*MQGGLW
Trigger: CCACAGCCCACCTTGCATGCATGGCCAGCCCCTCCA...GGAGGGACAAACAACCAAGCTATGGGTGACAGAGGCTCTCTCCTGGTGCCTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp GCTATCGCTGAGACTCCACCAATTGGTTGGCCTACAGGCCTCACCTCCCGACTCAGGTGTGTGCATGGGTaGACAGCCCGCCGTGACACA +
Preference number: 4 (lower is better)
Translates to: AIAETPPIGWPTGLTSRLRCVHG*TARRDT
Trigger: TGTGTCACGGCGGGCTGTGCACCCATGCACACACCT...GAGTCGGGAGGTGAGGCCTGTAGGCCAACCAATTGGTGGAGTCTCAGCGATAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp ATTGGTTGGCCTACAGGCCTCACCTCCCGACTCCCCTCACTGCTGGGCGACATTCTTGTCCAGGAGGGCTaGCCCTCCTGCTTTCACACA +
Preference number: 4 (lower is better)
Translates to: IGWPTGLTSRLPSLLGDILVQEG*PSCFHT
Trigger: TGTGTGAAAGCAGGAGGGGCAGCCCTCCTGGACAAG...AATGTCGCCCAGCAGTGAGGGGAGTCGGGAGGTGAGGCCTGTAGGCCAACCAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp TCTCCTGGCCAGTCTCAGAAGACCCAGGGATCCTCAAAAACCAGGGGAGAAGGACAAGAGGGACAGATCTaGCCGAGGCCCCCACCCTGC +
Preference number: 4 (lower is better)
Translates to: SPGQSQKTQGSSKTRGEGQEGQI*PRPPPC
Trigger: GCAGGGTGGGGGCCTCGGGCAGATCTGTCCCTCTTG...TCCTTCTCCCCTGGTTTTTGAGGATCCCTGGGTCTTCTGAGACTGGCCAGGAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp ATGCGCACACACGTCCTGTGTTACCACTGGCCAAGGAAACGCGAGTCTCAGGATCAAGAGGGACAGATCTaGCCGAGGCCCCCACCCTGC +
Preference number: 4 (lower is better)
Translates to: MRTHVLCYHWPRKRESQDQEGQI*PRPPPC
Trigger: GCAGGGTGGGGGCCTCGGGCAGATCTGTCCCTCTTG...ATCCTGAGACTCGCGTTTCCTTGGCCAGTGGTAACACAGGACGTGTGTGCGCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp ACCCTCCTTTCCAACTCCCTGAAACAGAACGTCCACACTGACACAGCTCCTTGGGGCTGGAGGTGGGGCTaGACACTCGGGGTGACCCTG +
Preference number: 4 (lower is better)
Translates to: TLLSNSLKQNVHTDTAPWGWRWG*TLGVTL
Trigger: CAGGGTCACCCCGAGTGTCCAGCCCCACCTCCAGCC...CCAAGGAGCTGTGTCAGTGTGGACGTTCTGTTTCAGGGAGTTGGAAAGGAGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp ATGTCCCACGGTGGCTCTGTTTGGTTTGACAACCTACCCCACAGGTGGCCAGAACTGATGGGCTGGAGGTaGGGCTGGACACTCGGGGTG +
Preference number: 4 (lower is better)
Translates to: MSHGGSVWFDNLPHRWPELMGWR*GWTLGV
Trigger: CACCCCGAGTGTCCAGCCCCACCTCCAGCCCATCAG...TTCTGGCCACCTGTGGGGTAGGTTGTCAAACCAAACAGAGCCACCGTGGGACAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp CCAAGGCAGGACAGGGCGATGCCATTGCAGACCCTCCCACTCCTGCTGGGGTCTGGAAGTTCTCCTCATTaGCTGTGCTGGGGAAGGAGA +
Preference number: 4 (lower is better)
Translates to: PRQDRAMPLQTLPLLLGSGSSPH*LCWGRR
Trigger: TCTCCTTCCCCAGCACAGCCAATGAGGAGAACTTCC...AGACCCCAGCAGGAGTGGGAGGGTCTGCAATGGCATCGCCCTGTCCTGCCTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp GAGAAGGGTCTGGCGGCACCCAGGGTCACTAGAGTGCAGGTGCAGGCACCAGGAGAGCCTGGTCCGCACTaGCAGAAATGTTGCTGTAGT +
Preference number: 4 (lower is better)
Translates to: EKGLAAPRVTRVQVQAPGEPGPH*QKCCCS
Trigger: ACTACAGCAACATTTCTGCCAGTGCGGACCAGGCTC...TCCTGGTGCCTGCACCTGCACTCTAGTGACCCTGGGTGCCGCCAGACCCTTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp ATTCGCTCCAGCCTCTGCTTTCTGCTTGGCCGCTCAGCGCCCGGGGATGGAGGATGGATGGCACAGGTGTaGAACTGCACACGGAAGATG +
Preference number: 4 (lower is better)
Translates to: IRSSLCFLLGRSAPGDGGWMAQV*NCTRKM
Trigger: CATCTTCCGTGTGCAGTTCCACACCTGTGCCATCCA...TCCTCCATCCCCGGGCGCTGAGCGGCCAAGCAGAAAGCAGAGGCTGGAGCGAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453356.1
CDS-3UTR CCA 90 bp CCCAACTGTCCAGTGGACCTTAGGCCCTTTGGCCCAAGTGCAAGCCTTCTGCCCCCCCCAGGTCATGGATaGCACAGGTGTGGAACTGCA +
Preference number: 4 (lower is better)
Translates to: PNCPVDLRPFGPSASLLPPPGHG*HRCGTA
Trigger: TGCAGTTCCACACCTGTGCCATCCATGACCTGGGGG...GGGCAGAAGGCTTGCACTTGGGCCAAAGGGCCTAAGGTCCACTGGACAGTTGGG
60% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp AAGAGAAGGGTCTGGCGGCACCCAGGGTCACTAGAGTGCAGGTGCAGGCACCAGACAACCCCCAGGTCATaGATGGCACAGGTGTGGAAC +
Preference number: 4 (lower is better)
Translates to: KRRVWRHPGSLECRCRHQTTPRS*MAQVWN
Trigger: GTTCCACACCTGTGCCATCCATGACCTGGGGGTTGT...CTGGTGCCTGCACCTGCACTCTAGTGACCCTGGGTGCCGCCAGACCCTTCTCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp GTAGAAGAGAAGGGTCTGGCGGCACCCAGGGTCACTAGAGTGCAGGTGCAGGCACGGTCTTGTCGGTCTTaGTGGAGGCTGTGGAGTTGC +
Preference number: 4 (lower is better)
Translates to: VEEKGLAAPRVTRVQVQARSCRS*WRLWSC
Trigger: GCAACTCCACAGCCTCCACCAAGACCGACAAGACCG...TGCCTGCACCTGCACTCTAGTGACCCTGGGTGCCGCCAGACCCTTCTCTTCTAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp ATTGGTTGGCCTACAGGCCTCACCTCCCGACTCCCCTCACTGCTGGGCGACATTCTGAGGTGCTGGGTGTaGTACATGGCGCCTTGCTTC +
Preference number: 4 (lower is better)
Translates to: IGWPTGLTSRLPSLLGDILRCWV*YMAPCF
Trigger: GAAGCAAGGCGCCATGTACCACACCCAGCACCTCAG...AATGTCGCCCAGCAGTGAGGGGAGTCGGGAGGTGAGGCCTGTAGGCCAACCAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp GTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCATGGGTCCCCTCCCCACAAGTGGGCTGGGACAACGTaGCGTCCAGAGGAGGGCACA +
Preference number: 4 (lower is better)
Translates to: VLLLGSRVVRIHGSPPHKWAGTT*RPEEGT
Trigger: TGTGCCCTCCTCTGGACGCCACGTTGTCCCAGCCCA...CTTGTGGGGAGGGGACCCATGAATCCTGACCACTCTTGAACCCAGAAGGAGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TGCAGGCACCAGGAGAGAGCCTCTGTCACCCATAGCTTGGTTGTTTGTCCCTCCTGGGCTGGGACAACGTaGCGTCCAGAGGAGGGCACA +
Preference number: 4 (lower is better)
Translates to: CRHQERASVTHSLVVCPSWAGTT*RPEEGT
Trigger: TGTGCCCTCCTCTGGACGCCACGTTGTCCCAGCCCA...GGAGGGACAAACAACCAAGCTATGGGTGACAGAGGCTCTCTCCTGGTGCCTGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp GTGTGCATGGGTGCACAGCCCGCCGTGACACAGAAGGGCTCTGGTGCAGGGCCCGTGACCATCCTGGTTTaGCAATTCATCGTCCAGGAT +
Preference number: 4 (lower is better)
Translates to: VCMGAQPAVTQKGSGAGPVTILV*QFIVQD
Trigger: ATCCTGGACGATGAATTGCCAAACCAGGATGGTCAC...GGGCCCTGCACCAGAGCCCTTCTGTGTCACGGCGGGCTGTGCACCCATGCACAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp GTAGAAGAGAAGGGTCTGGCGGCACCCAGGGTCACTAGAGTGCAGGTGCAGGCAACTTGTCCAGACCGTTaGTCAGTGGGGACAGGGCCT +
Preference number: 4 (lower is better)
Translates to: VEEKGLAAPRVTRVQVQATCPDR*SVGTGP
Trigger: AGGCCCTGTCCCCACTGACCAACGGTCTGGACAAGT...TGCCTGCACCTGCACTCTAGTGACCCTGGGTGCCGCCAGACCCTTCTCTTCTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp GCAATTCACTTCCCTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCCAGGCCCCGCCCGGCTaGCAGACTCGTAGGGGTAGC +
Preference number: 4 (lower is better)
Translates to: AIHFPLPTLHFLLSSEIGQAPPG*QTRRGS
Trigger: GCTACCCCTACGAGTCTGCCAGCCGGGCGGGGCCTG...GCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGGGAAGTGAATTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp GTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCATGGGTCCCCTCCCCACAAGGGGCATAGTGGGAGGTaGTCACTGGCTGTGGCCAGG +
Preference number: 4 (lower is better)
Translates to: VLLLGSRVVRIHGSPPHKGHSGR*SLAVAR
Trigger: CCTGGCCACAGCCAGTGACCACCTCCCACTATGCCC...CTTGTGGGGAGGGGACCCATGAATCCTGACCACTCTTGAACCCAGAAGGAGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp CCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGCTGCTGGCGTGGAGGTaGGCGAGGCTGCTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: PRCTFFSPPKLAQSPPSGLLAWR*ARLLLL
Trigger: CAGCAGCAGCAGCCTCGCCCACCTCCACGCCAGCAG...CCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp CCTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCCTCCTGGGCTCTTTCCTGCTaGCGTGGAGGTGGGCGAGGC +
Preference number: 4 (lower is better)
Translates to: PLPTLHFLLSSEIGPKSSWALSC*RGGGRG
Trigger: GCCTCGCCCACCTCCACGCCAGCAGGAAAGAGCCCA...GGAGGACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp GGGGAAGACACCCCGAGCTCAACAGCTGCCTGTTCTGACAGATCTCTTCCTATGTGGGCTCTTTCCTGCTaGCGTGGAGGTGGGCGAGGC +
Preference number: 4 (lower is better)
Translates to: GEDTPSSTAACSDRSLPMWALSC*RGGGRG
Trigger: GCCTCGCCCACCTCCACGCCAGCAGGAAAGAGCCCA...CATAGGAAGAGATCTGTCAGAACAGGCAGCTGTTGAGCTCGGGGTGTCTTCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp GCAGACCCTCCCACTCCTGCTGGGGTCTTTGTAGAAGAGAAGGGTCTGGCGGCAGAGGGCTGGGCCTGCTaGCTACAAGACTCTCCAAGT +
Preference number: 4 (lower is better)
Translates to: ADPPTPAGVFVEEKGLAAEGWAC*LQDSPS
Trigger: ACTTGGAGAGTCTTGTAGCCAGCAGGCCCAGCCCTC...TGCCGCCAGACCCTTCTCTTCTACAAAGACCCCAGCAGGAGTGGGAGGGTCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp GCTATCGCTGAGACTCCACCAATTGGTTGGCCTACAGGCCTCACCTCCCGACTCCAGGGAGACTGGGGATaGGGGTCTCTGCCAATGGCT +
Preference number: 4 (lower is better)
Translates to: AIAETPPIGWPTGLTSRLQGDWG*GSLPMA
Trigger: AGCCATTGGCAGAGACCCCCATCCCCAGTCTCCCTG...GAGTCGGGAGGTGAGGCCTGTAGGCCAACCAATTGGTGGAGTCTCAGCGATAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp GAGAAGGGTCTGGCGGCACCCAGGGTCACTAGAGTGCAGGTGCAGGCACCAGGACCAACGAATGCCCACTaGGGATATAGCCAGATCTGG +
Preference number: 4 (lower is better)
Translates to: EKGLAAPRVTRVQVQAPGPTNAH*GYSQIW
Trigger: CCAGATCTGGCTATATCCCCAGTGGGCATTCGTTGG...TCCTGGTGCCTGCACCTGCACTCTAGTGACCCTGGGTGCCGCCAGACCCTTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp ATGTCCCACGGTGGCTCTGTTTGGTTTGACAACCTACCCCACAGGTGGCCAGAAGGCCCTGGAGGGCTGTaGGTGGTCGGAAGGAAGGCA +
Preference number: 4 (lower is better)
Translates to: MSHGGSVWFDNLPHRWPEGPGGL*VVGRKA
Trigger: TGCCTTCCTTCCGACCACCCACAGCCCTCCAGGGCC...TTCTGGCCACCTGTGGGGTAGGTTGTCAAACCAAACAGAGCCACCGTGGGACAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp CCAGAACACCGTGATAGCAGGCTGATCAAACCGCTCACTTCCTCCCTGTTTTCCCCTCCGCAGAGGGGCTaGGGGCTCTGCAGGCTGCTT +
Preference number: 4 (lower is better)
Translates to: PEHRDSRLIKPLTSSLFSPPQRG*GLCRLL
Trigger: AAGCAGCCTGCAGAGCCCCCAGCCCCTCTGCGGAGG...GGAAAACAGGGAGGAAGTGAGCGGTTTGATCAGCCTGCTATCACGGTGTTCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TCTCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGCACCCCACTGGGTGGTaGGCTGCTCGGGGAGGTTCC +
Preference number: 4 (lower is better)
Translates to: SLLRNWPKVLLLGSRVVRHPTGW*AARGGS
Trigger: GGAACCTCCCCGAGCAGCCCACCACCCAGTGGGGTG...CCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp CTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCATGGGACCGCACCCCACTaGGTGGTGGGCTGCTCGGGG +
Preference number: 4 (lower is better)
Translates to: LRNWPKVLLLGSRVVRIHGTAPH*VVGCSG
Trigger: CCCCGAGCAGCCCACCACCCAGTGGGGTGCGGTCCC...ATGAATCCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp AAGAGAAGGGTCTGGCGGCACCCAGGGTCACTAGAGTGCAGGTGCAGGCACCAGATAGGCCTGGGTGGCTaGAGCACTAAAGCTCTTGGG +
Preference number: 4 (lower is better)
Translates to: KRRVWRHPGSLECRCRHQIGLGG*STKALG
Trigger: CCCAAGAGCTTTAGTGCTCCAGCCACCCAGGCCTAT...CTGGTGCCTGCACCTGCACTCTAGTGACCCTGGGTGCCGCCAGACCCTTCTCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp CTTCCCTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCGGCGTCCGGGGACCCTaGTCACTGCTCTCTCCCGAC +
Preference number: 4 (lower is better)
Translates to: LPSPHVALSSLLRNWPKVGVRGP*SLLSPD
Trigger: GTCGGGAGAGAGCAGTGACCAGGGTCCCCGGACGCC...GACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGGGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp CCAGAACACCGTGATAGCAGGCTGATCAAACCGCTCACTTCCTCCCTGTTTTCCGGCGTCCGGGGACCCTaGTCACTGCTCTCTCCCGAC +
Preference number: 4 (lower is better)
Translates to: PEHRDSRLIKPLTSSLFSGVRGP*SLLSPD
Trigger: GTCGGGAGAGAGCAGTGACCAGGGTCCCCGGACGCC...GGAAAACAGGGAGGAAGTGAGCGGTTTGATCAGCCTGCTATCACGGTGTTCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp GTAGAAGAGAAGGGTCTGGCGGCACCCAGGGTCACTAGAGTGCAGGTGCAGGCACACTGCTCTGGGGGCTaGAGACAGTGCTACCATGGA +
Preference number: 4 (lower is better)
Translates to: VEEKGLAAPRVTRVQVQAHCSGG*RQCYHG
Trigger: TCCATGGTAGCACTGTCTCCAGCCCCCAGAGCAGTG...TGCCTGCACCTGCACTCTAGTGACCCTGGGTGCCGCCAGACCCTTCTCTTCTAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp GGGGAAGACACCCCGAGCTCAACAGCTGCCTGTTCTGACAGATCTCTTCCTATGTGCCCCCACTGGGACTaGACATGCCGCTGGCGACAG +
Preference number: 4 (lower is better)
Translates to: GEDTPSSTAACSDRSLPMCPHWD*TCRWRQ
Trigger: CTGTCGCCAGCGGCATGTCCAGTCCCAGTGGGGGCA...CATAGGAAGAGATCTGTCAGAACAGGCAGCTGTTGAGCTCGGGGTGTCTTCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp CTTCCCTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCCGGTGCTGCCCCCACTaGGACTGGACATGCCGCTGG +
Preference number: 4 (lower is better)
Translates to: LPSPHVALSSLLRNWPKVRCCPH*DWTCRW
Trigger: CCAGCGGCATGTCCAGTCCCAGTGGGGGCAGCACCG...GACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGGGAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TGGTCAGGTGTTTTCCCAACTGTCCAGTGGACCTTAGGCCCTTTGGCCCAAGTGAAGGCCCCCGGCTCCTaGTCCTTGAGGAGCGCGATG +
Preference number: 4 (lower is better)
Translates to: WSGVFPTVQWTLGPLAQVKAPGS*SLRSAM
Trigger: CATCGCGCTCCTCAAGGACCAGGAGCCGGGGGCCTT...CACTTGGGCCAAAGGGCCTAAGGTCCACTGGACAGTTGGGAAAACACCTGACCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp GGCTTCTGGCCAAGGCAGGACAGGGCGATGCCATTGCAGACCCTCCCACTCCTGCATGATGGTTGGAGGTaGCGAAGACACCTTCATGGC +
Preference number: 4 (lower is better)
Translates to: GFWPRQDRAMPLQTLPLLHDGWR*RRHLHG
Trigger: GCCATGAAGGTGTCTTCGCCACCTCCAACCATCATG...CAGGAGTGGGAGGGTCTGCAATGGCATCGCCCTGTCCTGCCTTGGCCAGAAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp GTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCATGGGTCCCCTCCCCACAAGTGGTGGCAGCTGGCGTaGGGTCTGCAGCCAACGTCT +
Preference number: 4 (lower is better)
Translates to: VLLLGSRVVRIHGSPPHKWWQLA*GLQPTS
Trigger: AGACGTTGGCTGCAGACCCCACGCCAGCTGCCACCA...CTTGTGGGGAGGGGACCCATGAATCCTGACCACTCTTGAACCCAGAAGGAGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TCTGCCCTCTGCTGCATGGGCAGCGTGGCTCAGCTAGGGAAACCAAGGCAGAAAAACGATGGTGGCAGCTaGCGTGGGGTCTGCAGCCAA +
Preference number: 4 (lower is better)
Translates to: SALCCMGSVAQLGKPRQKNDGGS*RGVCSQ
Trigger: TTGGCTGCAGACCCCACGCCAGCTGCCACCATCGTT...TTTCTGCCTTGGTTTCCCTAGCTGAGCCACGCTGCCCATGCAGCAGAGGGCAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp CGCAGGGATGCTGGGAGGGAGTTACCAGCTTTCTGGCATGAATGGGTCCTCCCGCAGAGGCCGGCTGGTTaGGGTCAAGCTCAGCAAAGA +
Preference number: 4 (lower is better)
Translates to: RRDAGRELPAFWHEWVLPQRPAG*GQAQQR
Trigger: TCTTTGCTGAGCTTGACCCCAACCAGCCGGCCTCTG...CGGGAGGACCCATTCATGCCAGAAAGCTGGTAACTCCCTCCCAGCATCCCTGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp ACAGGGCGATGCCATTGCAGACCCTCCCACTCCTGCTGGGGTCTTTGTAGAAGACCATGGCACTGGCCCTaGGCAAGGGGCAGGGTTCAT +
Preference number: 4 (lower is better)
Translates to: TGRCHCRPSHSCWGLCRRPWHWP*ARGRVH
Trigger: ATGAACCCTGCCCCTTGCCCAGGGCCAGTGCCATGG...TCTTCTACAAAGACCCCAGCAGGAGTGGGAGGGTCTGCAATGGCATCGCCCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp CGATGCCATTGCAGACCCTCCCACTCCTGCTGGGGTCTTTGTAGAAGAGAAGGGCCATGGCACTGGCCCTaGGCAAGGGGCAGGGTTCAT +
Preference number: 4 (lower is better)
Translates to: RCHCRPSHSCWGLCRREGPWHWP*ARGRVH
Trigger: ATGAACCCTGCCCCTTGCCCAGGGCCAGTGCCATGG...CCCTTCTCTTCTACAAAGACCCCAGCAGGAGTGGGAGGGTCTGCAATGGCATCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp GCTATCGCTGAGACTCCACCAATTGGTTGGCCTACAGGCCTCACCTCCCGACTCAAGGGGGCCAAAGGCTaGGACATGTGCAACCCCTCC +
Preference number: 4 (lower is better)
Translates to: AIAETPPIGWPTGLTSRLKGAKG*DMCNPS
Trigger: GGAGGGGTTGCACATGTCCCAGCCTTTGGCCCCCTT...GAGTCGGGAGGTGAGGCCTGTAGGCCAACCAATTGGTGGAGTCTCAGCGATAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp CGATGCCATTGCAGACCCTCCCACTCCTGCTGGGGTCTTTGTAGAAGAGAAGGGCTGGAGTGGAGGGGCTaGCCATGCATGCAAGGTGGG +
Preference number: 4 (lower is better)
Translates to: RCHCRPSHSCWGLCRREGLEWRG*PCMQGG
Trigger: CCCACCTTGCATGCATGGCCAGCCCCTCCACTCCAG...CCCTTCTCTTCTACAAAGACCCCAGCAGGAGTGGGAGGGTCTGCAATGGCATCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp CATGGGTGCACAGCCCGCCGTGACACAGAAGGGCTCTGGTGCAGGGCCCAGAGGATGTCCATGACTCCCTaGCTCTTTGTTGCCCATCTT +
Preference number: 4 (lower is better)
Translates to: HGCTARRDTEGLWCRAQRMSMTP*LFVAHL
Trigger: AAGATGGGCAACAAAGAGCCAGGGAGTCATGGACAT...CCTCTGGGCCCTGCACCAGAGCCCTTCTGTGTCACGGCGGGCTGTGCACCCATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp GCTATCGCTGAGACTCCACCAATTGGTTGGCCTACAGGCCTCACCTCCCGACTCTGGGAAAAAGCCACGTaGAGCTCACTGGGCCCCTCC +
Preference number: 4 (lower is better)
Translates to: AIAETPPIGWPTGLTSRLWEKAT*SSLGPS
Trigger: GGAGGGGCCCAGTGAGCTCCACGTGGCTTTTTCCCA...GAGTCGGGAGGTGAGGCCTGTAGGCCAACCAATTGGTGGAGTCTCAGCGATAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp ACAGGGCGATGCCATTGCAGACCCTCCCACTCCTGCTGGGGTCTTTGTAGAAGACCCTTCTGTGCCCCCTaGACAGCATGCTCCCCTGGA +
Preference number: 4 (lower is better)
Translates to: TGRCHCRPSHSCWGLCRRPFCAP*TACSPG
Trigger: TCCAGGGGAGCATGCTGTCCAGGGGGCACAGAAGGG...TCTTCTACAAAGACCCCAGCAGGAGTGGGAGGGTCTGCAATGGCATCGCCCTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp CCAAGGCAGGACAGGGCGATGCCATTGCAGACCCTCCCACTCCTGCTGGGGTCTAGGAGGCAGGGGTGGTaGACAAAAGTAGGAGTGAGA +
Preference number: 4 (lower is better)
Translates to: PRQDRAMPLQTLPLLLGSRRQGW*TKVGVR
Trigger: TCTCACTCCTACTTTTGTCCACCACCCCTGCCTCCT...AGACCCCAGCAGGAGTGGGAGGGTCTGCAATGGCATCGCCCTGTCCTGCCTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp GTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCATGGGTCCCCTCCCCACAAGCAGGTGCAGCCTTCCTaGGTGATGACCTGGCGGCAG +
Preference number: 4 (lower is better)
Translates to: VLLLGSRVVRIHGSPPHKQVQPS*VMTWRQ
Trigger: CTGCCGCCAGGTCATCACCCAGGAAGGCTGCACCTG...CTTGTGGGGAGGGGACCCATGAATCCTGACCACTCTTGAACCCAGAAGGAGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000646520.1
ENST00000651849.1
3UTR CAA 72 bp TGCAGGCACCAGGAGAGAGCCTCTGTCACCCATAGCTaGGTTGTTTGTCCCTCCCCTGCTGCACTGCCACCA +
Preference number: 4 (lower is better)
Translates to: CRHQERASVTHS*VVCPSPAALPP
Trigger: TGGTGGCAGTGCAGCAGGGGAGGGACAAACAACCAAGCTATGGGTGACAGAGGCTCTCTCCTGGTGCCTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000615025.4
ENST00000646520.1
ENST00000651849.1
3UTR CAA 72 bp CACTTCTCACCTGGGCTATCGCTGAGACTCCACCAATaGGTTGGCCTACAGGCCTCACCTCCCGACTCCCCT +
Preference number: 4 (lower is better)
Translates to: HFSPGLSLRLHQ*VGLQASPPDSP
Trigger: AGGGGAGTCGGGAGGTGAGGCCTGTAGGCCAACCAATTGGTGGAGTCTCAGCGATAGCCCAGGTGAGAAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp GTGAGGAAGGGAAAAGCGACCGTGAAAGCTGACCCCAGACTCAGTCCTGGGCCCGTGCATTCTCAGTGGTaGTGGGCACCAGCTCATGGT +
Preference number: 4 (lower is better)
Translates to: VRKGKATVKADPRLSPGPVHSQW*WAPAHG
Trigger: ACCATGAGCTGGTGCCCATCACCACTGAGAATGCAC...GGGCCCAGGACTGAGTCTGGGGTCAGCTTTCACGGTCGCTTTTCCCTTCCTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp TTCCTTCGCAGGTCCCCTCTCCATTGTTTTCTCGCCCAATCCTTCCCTCTTGCTGCTGGACACTCGGGGTaGCCCTGGTGGAGCCGTTGT +
Preference number: 4 (lower is better)
Translates to: FLRRSPLHCFLAQSFPLAAGHSG*PWWSRC
Trigger: ACAACGGCTCCACCAGGGTCACCCCGAGTGTCCAGC...AGCAAGAGGGAAGGATTGGGCGAGAAAACAATGGAGAGGGGACCTGCGAAGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp GTAGAAGAGAAGGGTCTGGCGGCACCCAGGGTCACTAGAGTGCAGGTGCAGGCATCACACTCATGTTTCTaGTGGGCTGGAGGTGGGGCT +
Preference number: 4 (lower is better)
Translates to: VEEKGLAAPRVTRVQVQASHSCF*WAGGGA
Trigger: AGCCCCACCTCCAGCCCATCAGAAACATGAGTGTGA...TGCCTGCACCTGCACTCTAGTGACCCTGGGTGCCGCCAGACCCTTCTCTTCTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp ACAGGGCGATGCCATTGCAGACCCTCCCACTCCTGCTGGGGTCTTTGTAGAAGAACTGCACACGGAAGATaGCGTCTCGGGCTGGGCTTC +
Preference number: 4 (lower is better)
Translates to: TGRCHCRPSHSCWGLCRRTAHGR*RLGLGF
Trigger: GAAGCCCAGCCCGAGACGTCATCTTCCGTGTGCAGT...TCTTCTACAAAGACCCCAGCAGGAGTGGGAGGGTCTGCAATGGCATCGCCCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp GTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCATGGGTCCCCTCCCCACAAGACTGCACACGGAAGATaGCGTCTCGGGCTGGGCTTC +
Preference number: 4 (lower is better)
Translates to: VLLLGSRVVRIHGSPPHKTAHGR*RLGLGF
Trigger: GAAGCCCAGCCCGAGACGTCATCTTCCGTGTGCAGT...CTTGTGGGGAGGGGACCCATGAATCCTGACCACTCTTGAACCCAGAAGGAGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp GTGAGGAAGGGAAAAGCGACCGTGAAAGCTGACCCCAGACTCAGTCCTGGGCCCCATCTCGATGCCCACTaGAGTTGTCGTAGGAGTCCC +
Preference number: 4 (lower is better)
Translates to: VRKGKATVKADPRLSPGPHLDAH*SCRRSP
Trigger: GGGACTCCTACGACAACTTCAGTGGGCATCGAGATG...GGGCCCAGGACTGAGTCTGGGGTCAGCTTTCACGGTCGCTTTTCCCTTCCTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp GTGAGGAAGGGAAAAGCGACCGTGAAAGCTGACCCCAGACTCAGTCCTGGGCCCATGCTGCCCGCACTGTaGCCATCCTGGTTTGGCAAT +
Preference number: 4 (lower is better)
Translates to: VRKGKATVKADPRLSPGPMLPAL*PSWFGN
Trigger: ATTGCCAAACCAGGATGGTCACAGTGCGGGCAGCAT...GGGCCCAGGACTGAGTCTGGGGTCAGCTTTCACGGTCGCTTTTCCCTTCCTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp GTGTGCATGGGTGCACAGCCCGCCGTGACACAGAAGGGCTCTGGTGCAGGGCCCCCAGCATCAGCATATTaGGTGTTTCGATGGACTGTT +
Preference number: 4 (lower is better)
Translates to: VCMGAQPAVTQKGSGAGPPASAY*VFRWTV
Trigger: AACAGTCCATCGAAACACTCAATATGCTGATGCTGG...GGGCCCTGCACCAGAGCCCTTCTGTGTCACGGCGGGCTGTGCACCCATGCACAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp ACAGGGCGATGCCATTGCAGACCCTCCCACTCCTGCTGGGGTCTTTGTAGAAGAGTCAGTGGATGGGACTaGCGGGAGGATCCAGAGAGG +
Preference number: 4 (lower is better)
Translates to: TGRCHCRPSHSCWGLCRRVSGWD*REDPER
Trigger: CCTCTCTGGATCCTCCCGTCAGTCCCATCCACTGAC...TCTTCTACAAAGACCCCAGCAGGAGTGGGAGGGTCTGCAATGGCATCGCCCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp TGCAGGCACCAGGAGAGAGCCTCTGTCACCCATAGCTTGGTTGTTTGTCCCTCCGTCAGTGGATGGGACTaGCGGGAGGATCCAGAGAGG +
Preference number: 4 (lower is better)
Translates to: CRHQERASVTHSLVVCPSVSGWD*REDPER
Trigger: CCTCTCTGGATCCTCCCGTCAGTCCCATCCACTGAC...GGAGGGACAAACAACCAAGCTATGGGTGACAGAGGCTCTCTCCTGGTGCCTGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp ACAGGGCGATGCCATTGCAGACCCTCCCACTCCTGCTGGGGTCTTTGTAGAAGAAAGTGCTGTCAGCACTaGGGATGGGGCTGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: TGRCHCRPSHSCWGLCRRKCCQH*GWGCWW
Trigger: CCACCAGCAGCCCCATCCTCAGTGCTGACAGCACTT...TCTTCTACAAAGACCCCAGCAGGAGTGGGAGGGTCTGCAATGGCATCGCCCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp CTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCATGTTCTGTGGCGCGCCTaGGGGCTCCCAGGCACCGTG +
Preference number: 4 (lower is better)
Translates to: LRNWPKVLLLGSRVVRIHVLWRA*GLPGTV
Trigger: CACGGTGCCTGGGAGCCCTCAGGCGCGCCACAGAAC...ATGAATCCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp CCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGCAGCCATGCTGGGATTaGTGGCCCGCCAGCCGAAGC +
Preference number: 4 (lower is better)
Translates to: PRCTFFSPPKLAQSPPSGQPCWD*WPASRS
Trigger: GCTTCGGCTGGCGGGCCATCAATCCCAGCATGGCTG...CCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp GTAGAAGAGAAGGGTCTGGCGGCACCCAGGGTCACTAGAGTGCAGGTGCAGGCAGGACCCATCATCTGGTaGTGGCTCAAACTGGGACTG +
Preference number: 4 (lower is better)
Translates to: VEEKGLAAPRVTRVQVQAGPIIW*WLKLGL
Trigger: CAGTCCCAGTTTGAGCCATCACCAGATGATGGGTCC...TGCCTGCACCTGCACTCTAGTGACCCTGGGTGCCGCCAGACCCTTCTCTTCTAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp GTACAGGAGTGGGGACGCGTCAGTGTACAATACATTCATGTCCAGGATAAGGAGGGCTGCGGAGTCTGGTaGCGGGGAGGTGGCAGGGCT +
Preference number: 4 (lower is better)
Translates to: VQEWGRVSVQYIHVQDKEGCGVW*RGGGRA
Trigger: AGCCCTGCCACCTCCCCGTCACCAGACTCCGCAGCC...CTCCTTATCCTGGACATGAATGTATTGTACACTGACGCGTCCCCACTCCTGTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp CCCAACTGTCCAGTGGACCTTAGGCCCTTTGGCCCAAGTGCAAGCCTTCTGCCCCTGTGGCCCAGTGAGTaGCTCCATGTCCACAGAGTT +
Preference number: 4 (lower is better)
Translates to: PNCPVDLRPFGPSASLLPLWPSE*LHVHRV
Trigger: AACTCTGTGGACATGGAGTCACTCACTGGGCCACAG...GGGCAGAAGGCTTGCACTTGGGCCAAAGGGCCTAAGGTCCACTGGACAGTTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp GGGCGATGCCATTGCAGACCCTCCCACTCCTGCTGGGGTCTTTGTAGAAGAGAATGGCCTGTGGCCCAGTaGGTGACTCCATGTCCACAG +
Preference number: 4 (lower is better)
Translates to: GRCHCRPSHSCWGLCRREWPVAQ*VTPCPQ
Trigger: CTGTGGACATGGAGTCACTCACTGGGCCACAGGCCA...TTCTCTTCTACAAAGACCCCAGCAGGAGTGGGAGGGTCTGCAATGGCATCGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp CCCAACTGTCCAGTGGACCTTAGGCCCTTTGGCCCAAGTGCAAGCCTTCTGCCCCCTGGGCAGAGACTTTaGAGTGAACGATGGTGGCAG +
Preference number: 4 (lower is better)
Translates to: PNCPVDLRPFGPSASLLPPGQRL*SERWWQ
Trigger: CTGCCACCATCGTTCACTTCAAAGTCTCTGCCCAGG...GGGCAGAAGGCTTGCACTTGGGCCAAAGGGCCTAAGGTCCACTGGACAGTTGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp GCAGACCCTCCCACTCCTGCTGGGGTCTTTGTAGAAGAGAAGGGTCTGGCGGCACCTGGGCAGAGACTTTaGAGTGAACGATGGTGGCAG +
Preference number: 4 (lower is better)
Translates to: ADPPTPAGVFVEEKGLAAPGQRL*SERWWQ
Trigger: CTGCCACCATCGTTCACTTCAAAGTCTCTGCCCAGG...TGCCGCCAGACCCTTCTCTTCTACAAAGACCCCAGCAGGAGTGGGAGGGTCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp TGCAGGCACCAGGAGAGAGCCTCTGTCACCCATAGCTTGGTTGTTTGTCCCTCCCCTTGGAGACGAAGTTaGCGATGGCAGAGGCCGGCT +
Preference number: 4 (lower is better)
Translates to: CRHQERASVTHSLVVCPSPWRRS*RWQRPA
Trigger: AGCCGGCCTCTGCCATCGTCAACTTCGTCTCCAAGG...GGAGGGACAAACAACCAAGCTATGGGTGACAGAGGCTCTCTCCTGGTGCCTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp CACATGCGCACACACGTCCTGTGTTACCACTGGCCAAGGAAACGCGAGTCTCAGTGGCCGGAGCCTCACTaGGCAGAAAGTAGGTTCCCC +
Preference number: 4 (lower is better)
Translates to: HMRTHVLCYHWPRKRESQWPEPH*AESRFP
Trigger: GGGGAACCTACTTTCTGCTCAGTGAGGCTCCGGCCA...CTGAGACTCGCGTTTCCTTGGCCAGTGGTAACACAGGACGTGTGTGCGCATGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp TGGTCAGGTGTTTTCCCAACTGTCCAGTGGACCTTAGGCCCTTTGGCCCAAGTGACACATCCTGGGAGCTaGCTGCTGGGCCCCTGGCTT +
Preference number: 4 (lower is better)
Translates to: WSGVFPTVQWTLGPLAQVTHPGS*LLGPWL
Trigger: AAGCCAGGGGCCCAGCAGTCAGCTCCCAGGATGTGT...CACTTGGGCCAAAGGGCCTAAGGTCCACTGGACAGTTGGGAAAACACCTGACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp GTGAGGAAGGGAAAAGCGACCGTGAAAGCTGACCCCAGACTCAGTCCTGGGCCCACAGAACGTCCACACTaGCACAGCTCCTTGGAGGAG +
Preference number: 4 (lower is better)
Translates to: VRKGKATVKADPRLSPGPTERPH*HSSLEE
Trigger: CTCCTCCAAGGAGCTGTGTCAGTGTGGACGTTCTGT...GGGCCCAGGACTGAGTCTGGGGTCAGCTTTCACGGTCGCTTTTCCCTTCCTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp TCTTCTCCCAGACCCTTTCCCATCCCAGCCCATGTTCAAGGCCAGACAGCGCTCGGGTTTGCTAGGGAATaGGGAGAGGGGGAAACCCAG +
Preference number: 4 (lower is better)
Translates to: SSPRPFPIPAHVQGQTALGFARE*GEGETQ
Trigger: CTGGGTTTCCCCCTCTCCTCATTCCCTAGCAAACCC...GAGCGCTGTCTGGCCTTGAACATGGGCTGGGATGGGAAAGGGTCTGGGAGAAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp TGCAGGCACCAGGAGAGAGCCTCTGTCACCCATAGCTTGGTTGTTTGTCCCTCCAGCGACCGTGAAAGCTaGCCCCAGACTCAGTCCTGG +
Preference number: 4 (lower is better)
Translates to: CRHQERASVTHSLVVCPSSDRES*PQTQSW
Trigger: CCAGGACTGAGTCTGGGGTCAGCTTTCACGGTCGCT...GGAGGGACAAACAACCAAGCTATGGGTGACAGAGGCTCTCTCCTGGTGCCTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp GTAGAAGAGAAGGGTCTGGCGGCACCCAGGGTCACTAGAGTGCAGGTGCAGGCATCGCTGCGATGTCCATaGCTCCCTGGCTCTTTGTTG +
Preference number: 4 (lower is better)
Translates to: VEEKGLAAPRVTRVQVQASLRCP*LPGSLL
Trigger: CAACAAAGAGCCAGGGAGTCATGGACATCGCAGCGA...TGCCTGCACCTGCACTCTAGTGACCCTGGGTGCCGCCAGACCCTTCTCTTCTAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp TTCCTTCGCAGGTCCCCTCTCCATTGTTTTCTCGCCCAATCCTTCCCTCTTGCTGTGGCAGCACGGGACTaGACCTGCTGGGGTCTGCGT +
Preference number: 4 (lower is better)
Translates to: FLRRSPLHCFLAQSFPLAVAARD*TCWGLR
Trigger: ACGCAGACCCCAGCAGGTTCAGTCCCGTGCTGCCAC...AGCAAGAGGGAAGGATTGGGCGAGAAAACAATGGAGAGGGGACCTGCGAAGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp GGACAGGAGCCCCAACATGAAGTTCTCAGTGCAAAGCTTTGGATTCTGGCTTGGGCTGGACACTCGGGGTaGCCCTGGTGGAGCCCTCCA +
Preference number: 4 (lower is better)
Translates to: GQEPQHEVLSAKLWILAWAGHSG*PWWSPP
Trigger: TGGAGGGCTCCACCAGGGTCACCCCGAGTGTCCAGC...CCAAGCCAGAATCCAAAGCTTTGCACTGAGAACTTCATGTTGGGGCTCCTGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310858.10
CDS-3UTR GCA 90 bp GTGAGGAAGGGAAAAGCGACCGTGAAAGCTGACCCCAGACTCAGTCCTGGGCCCTCTCCTCATTGGCTGTaGTGGGGAAGGAGACAGCGA +
Preference number: 4 (lower is better)
Translates to: VRKGKATVKADPRLSPGPSPHWL*WGRRQR
Trigger: TCGCTGTCTCCTTCCCCAGCACAGCCAATGAGGAGA...GGGCCCAGGACTGAGTCTGGGGTCAGCTTTCACGGTCGCTTTTCCCTTCCTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp AAGAGAAGGGTCTGGCGGCACCCAGGGTCACTAGAGTGCAGGTGCAGGCACCAGGCACAGGTGTGGAACTaGACACGGAAGATGACGTCT +
Preference number: 4 (lower is better)
Translates to: KRRVWRHPGSLECRCRHQAQVWN*TRKMTS
Trigger: AGACGTCATCTTCCGTGTGCAGTTCCACACCTGTGC...CTGGTGCCTGCACCTGCACTCTAGTGACCCTGGGTGCCGCCAGACCCTTCTCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp GTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCATGGGTCCCCTCCCCACAAGCCACCACCTCCTCCATaGCGTCATCTCGATGCCCAC +
Preference number: 4 (lower is better)
Translates to: VLLLGSRVVRIHGSPPHKPPPPP*RHLDAH
Trigger: GTGGGCATCGAGATGACGGCATGGAGGAGGTGGTGG...CTTGTGGGGAGGGGACCCATGAATCCTGACCACTCTTGAACCCAGAAGGAGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp CACATGCGCACACACGTCCTGTGTTACCACTGGCCAAGGAAACGCGAGTCTCAGCCACCACCTCCTCCATaGCGTCATCTCGATGCCCAC +
Preference number: 4 (lower is better)
Translates to: HMRTHVLCYHWPRKRESQPPPPP*RHLDAH
Trigger: GTGGGCATCGAGATGACGGCATGGAGGAGGTGGTGG...CTGAGACTCGCGTTTCCTTGGCCAGTGGTAACACAGGACGTGTGTGCGCATGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp GTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCATGGGTCCCCTCCCCACAAGGCCCCGGTGCTGCCGTaGAGGGAGTCTTTCTTCTTC +
Preference number: 4 (lower is better)
Translates to: VLLLGSRVVRIHGSPPHKAPVLP*RESFFF
Trigger: GAAGAAGAAAGACTCCCTGCACGGCAGCACCGGGGC...CTTGTGGGGAGGGGACCCATGAATCCTGACCACTCTTGAACCCAGAAGGAGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp CTTCCCTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCGGGCGGGACCTGAGGTaGTGGGTGTGGTACATGGCG +
Preference number: 4 (lower is better)
Translates to: LPSPHVALSSLLRNWPKVGRDLR*WVWYMA
Trigger: CGCCATGTACCACACCCAGCACCTCAGGTCCCGCCC...GACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGGGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp CCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGGGGCGGGACCTGAGGTaGTGGGTGTGGTACATGGCG +
Preference number: 4 (lower is better)
Translates to: PRCTFFSPPKLAQSPPSGGRDLR*WVWYMA
Trigger: CGCCATGTACCACACCCAGCACCTCAGGTCCCGCCC...CCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGG
59% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp CCCAGCTTGATTTCCCCTTGCAAAGCAGTTGAGTTAGGGAGACAGAGCTTTTCCCACAGCCGAGCCCCCTaGTGGGCGGGACCTGAGGTG +
Preference number: 4 (lower is better)
Translates to: PSLISPCKAVELGRQSFSHSRAP*WAGPEV
Trigger: CACCTCAGGTCCCGCCCAGCAGGGGGCTCGGCTGTG...GGAAAAGCTCTGTCTCCCTAACTCAACTGCTTTGCAAGGGGAAATCAAGCTGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp CTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCATGCACAGCCTCCCGGCTaGTTCCCCCTCGGACCGGAG +
Preference number: 4 (lower is better)
Translates to: LRNWPKVLLLGSRVVRIHAQPPG*FPLGPE
Trigger: CTCCGGTCCGAGGGGGAAGCAGCCGGGAGGCTGTGC...ATGAATCCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp TGCAGGCACCAGGAGAGAGCCTCTGTCACCCATAGCTTGGTTGTTTGTCCCTCCAAGTGGGCTCTTTCCTaGTGGCGTGGAGGTGGGCGA +
Preference number: 4 (lower is better)
Translates to: CRHQERASVTHSLVVCPSKWALS*WRGGGR
Trigger: TCGCCCACCTCCACGCCAGCAGGAAAGAGCCCACTT...GGAGGGACAAACAACCAAGCTATGGGTGACAGAGGCTCTCTCCTGGTGCCTGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp TTCCTTCGCAGGTCCCCTCTCCATTGTTTTCTCGCCCAATCCTTCCCTCTTGCTGGGGATGGGGGTCTCTaGCAATGGCTGAGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: FLRRSPLHCFLAQSFPLAGDGGL*QWLRAG
Trigger: CCCAGCCCTCAGCCATTGGCAGAGACCCCCATCCCC...AGCAAGAGGGAAGGATTGGGCGAGAAAACAATGGAGAGGGGACCTGCGAAGGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp TCTCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGCTCCTGCTGGGAGGCTaGTCGCGGGAACTCAGGGAG +
Preference number: 4 (lower is better)
Translates to: SLLRNWPKVLLLGSRVVRLLLGG*SRELRE
Trigger: CTCCCTGAGTTCCCGCGAGCAGCCTCCCAGCAGGAG...CCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp ACAGGGCGATGCCATTGCAGACCCTCCCACTCCTGCTGGGGTCTTTGTAGAAGAGACTGTTCAATCTCCTaGTGGGAGGCTGCTCGCGGG +
Preference number: 4 (lower is better)
Translates to: TGRCHCRPSHSCWGLCRRDCSIS*WEAARG
Trigger: CCCGCGAGCAGCCTCCCAGCAGGAGATTGAACAGTC...TCTTCTACAAAGACCCCAGCAGGAGTGGGAGGGTCTGCAATGGCATCGCCCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp GTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCATGGGTCCCCTCCCCACAAGGACTGTTCAATCTCCTaGTGGGAGGCTGCTCGCGGG +
Preference number: 4 (lower is better)
Translates to: VLLLGSRVVRIHGSPPHKDCSIS*WEAARG
Trigger: CCCGCGAGCAGCCTCCCAGCAGGAGATTGAACAGTC...CTTGTGGGGAGGGGACCCATGAATCCTGACCACTCTTGAACCCAGAAGGAGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp TCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATAGGGGCTGGGGGCTCTaGAGGCTGCTTCTCCCGAGC +
Preference number: 4 (lower is better)
Translates to: SPPKLAQSPPSGFKSGQDRGWGL*RLLLPS
Trigger: GCTCGGGAGAAGCAGCCTGCAGAGCCCCCAGCCCCT...ATCCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp TGGTCAGGTGTTTTCCCAACTGTCCAGTGGACCTTAGGCCCTTTGGCCCAAGTGGGGGACCCTGGTCACTaGTCTCTCCCGACGGGAAAC +
Preference number: 4 (lower is better)
Translates to: WSGVFPTVQWTLGPLAQVGDPGH*SLPTGN
Trigger: GTTTCCCGTCGGGAGAGAGCAGTGACCAGGGTCCCC...CACTTGGGCCAAAGGGCCTAAGGTCCACTGGACAGTTGGGAAAACACCTGACCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp ATGTCCCACGGTGGCTCTGTTTGGTTTGACAACCTACCCCACAGGTGGCCAGAAGGGGACCCTGGTCACTaGTCTCTCCCGACGGGAAAC +
Preference number: 4 (lower is better)
Translates to: MSHGGSVWFDNLPHRWPEGDPGH*SLPTGN
Trigger: GTTTCCCGTCGGGAGAGAGCAGTGACCAGGGTCCCC...TTCTGGCCACCTGTGGGGTAGGTTGTCAAACCAAACAGAGCCACCGTGGGACAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp GGGGAAGACACCCCGAGCTCAACAGCTGCCTGTTCTGACAGATCTCTTCCTATGGGGGACCCTGGTCACTaGTCTCTCCCGACGGGAAAC +
Preference number: 4 (lower is better)
Translates to: GEDTPSSTAACSDRSLPMGDPGH*SLPTGN
Trigger: GTTTCCCGTCGGGAGAGAGCAGTGACCAGGGTCCCC...CATAGGAAGAGATCTGTCAGAACAGGCAGCTGTTGAGCTCGGGGTGTCTTCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp GTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCATGGGTCCCCTCCCCACAAGAACCTGGTAGACCCCTaGTGGGTGCCGACACAGGCT +
Preference number: 4 (lower is better)
Translates to: VLLLGSRVVRIHGSPPHKNLVDP*WVPTQA
Trigger: AGCCTGTGTCGGCACCCAGCAGGGGTCTACCAGGTT...CTTGTGGGGAGGGGACCCATGAATCCTGACCACTCTTGAACCCAGAAGGAGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp AAGAGAAGGGTCTGGCGGCACCCAGGGTCACTAGAGTGCAGGTGCAGGCACCAGGGCTGGCTATTGCATTaGTATGAAGACCGGAGGCCA +
Preference number: 4 (lower is better)
Translates to: KRRVWRHPGSLECRCRHQGWLLH*YEDRRP
Trigger: TGGCCTCCGGTCTTCATAGCAATGCAATAGCCAGCC...CTGGTGCCTGCACCTGCACTCTAGTGACCCTGGGTGCCGCCAGACCCTTCTCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp ATGCGCACACACGTCCTGTGTTACCACTGGCCAAGGAAACGCGAGTCTCAGGATGGTCCAAGCAGGGGCTaGCGGGAACCACAGATCCAG +
Preference number: 4 (lower is better)
Translates to: MRTHVLCYHWPRKRESQDGPSRG*REPQIQ
Trigger: CTGGATCTGTGGTTCCCGGCAGCCCCTGCTTGGACC...ATCCTGAGACTCGCGTTTCCTTGGCCAGTGGTAACACAGGACGTGTGTGCGCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp CCTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCCTCCCCAGAGGCACTGCTCTaGCGGGACAGTGTGGGTCTC +
Preference number: 4 (lower is better)
Translates to: PLPTLHFLLSSEIGPKSSPEALL*RDSVGL
Trigger: GAGACCCACACTGTCCCGGCAGAGCAGTGCCTCTGG...GGAGGACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp GGGGAAGACACCCCGAGCTCAACAGCTGCCTGTTCTGACAGATCTCTTCCTATGGGTAGCCAGAGGCACTaGTCTGCCGGGACAGTGTGG +
Preference number: 4 (lower is better)
Translates to: GEDTPSSTAACSDRSLPMGSQRH*SAGTVW
Trigger: CCACACTGTCCCGGCAGAGCAGTGCCTCTGGCTACC...CATAGGAAGAGATCTGTCAGAACAGGCAGCTGTTGAGCTCGGGGTGTCTTCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp ATGCGCACACACGTCCTGTGTTACCACTGGCCAAGGAAACGCGAGTCTCAGGATGGTGTTGGGCTCCCTTaGCGGAAGGCTGCGGAGTCT +
Preference number: 4 (lower is better)
Translates to: MRTHVLCYHWPRKRESQDGVGLP*RKAAES
Trigger: AGACTCCGCAGCCTTCCGGCAAGGGAGCCCAACACC...ATCCTGAGACTCGCGTTTCCTTGGCCAGTGGTAACACAGGACGTGTGTGCGCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp CCTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCCTCCGGTGTTGGGCTCCCTTaGCGGAAGGCTGCGGAGTCT +
Preference number: 4 (lower is better)
Translates to: PLPTLHFLLSSEIGPKSSGVGLP*RKAAES
Trigger: AGACTCCGCAGCCTTCCGGCAAGGGAGCCCAACACC...GGAGGACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp GGGGAAGACACCCCGAGCTCAACAGCTGCCTGTTCTGACAGATCTCTTCCTATGCATAGTTGGGGAGGCTaGCTGCCCGGTCTCCCACTG +
Preference number: 4 (lower is better)
Translates to: GEDTPSSTAACSDRSLPMHSWGG*LPGLPL
Trigger: CAGTGGGAGACCGGGCAGGCAGCCTCCCCAACTATG...CATAGGAAGAGATCTGTCAGAACAGGCAGCTGTTGAGCTCGGGGTGTCTTCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp CCTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCCTCCCACTGGGACTGGACATaGCGCTGGCGACAGGCGAAG +
Preference number: 4 (lower is better)
Translates to: PLPTLHFLLSSEIGPKSSHWDWT*RWRQAK
Trigger: CTTCGCCTGTCGCCAGCGGCATGTCCAGTCCCAGTG...GGAGGACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp TGCAGGCACCAGGAGAGAGCCTCTGTCACCCATAGCTTGGTTGTTTGTCCCTCCAGAAGGAGACGGTGCTaGCCCCACTGGGACTGGACA +
Preference number: 4 (lower is better)
Translates to: CRHQERASVTHSLVVCPSRRRRC*PHWDWT
Trigger: TGTCCAGTCCCAGTGGGGGCAGCACCGTCTCCTTCT...GGAGGGACAAACAACCAAGCTATGGGTGACAGAGGCTCTCTCCTGGTGCCTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp TCTCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGGGGAGAAGGAGACGGTaGTGCCCCCACTGGGACTGG +
Preference number: 4 (lower is better)
Translates to: SLLRNWPKVLLLGSRVVRGRRRR*CPHWDW
Trigger: CCAGTCCCAGTGGGGGCAGCACCGTCTCCTTCTCCC...CCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp CTTCCCTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCGGGAGAAGGAGACGGTaGTGCCCCCACTGGGACTGG +
Preference number: 4 (lower is better)
Translates to: LPSPHVALSSLLRNWPKVGRRRR*CPHWDW
Trigger: CCAGTCCCAGTGGGGGCAGCACCGTCTCCTTCTCCC...GACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGGGAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp ACAGGGCGATGCCATTGCAGACCCTCCCACTCCTGCTGGGGTCTTTGTAGAAGACCAGGGTCACTAGAGTaGAGGTGCAGGCACCAGGAG +
Preference number: 4 (lower is better)
Translates to: TGRCHCRPSHSCWGLCRRPGSLE*RCRHQE
Trigger: CTCCTGGTGCCTGCACCTGCACTCTAGTGACCCTGG...TCTTCTACAAAGACCCCAGCAGGAGTGGGAGGGTCTGCAATGGCATCGCCCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp GCAGACCCTCCCACTCCTGCTGGGGTCTTTGTAGAAGAGAAGGGTCTGGCGGCACCAACACAGGGACCCTaGAGAATAGAACAGGGCTGG +
Preference number: 4 (lower is better)
Translates to: ADPPTPAGVFVEEKGLAAPTQGP*RIEQGW
Trigger: CCAGCCCTGTTCTATTCTGCAGGGTCCCTGTGTTGG...TGCCGCCAGACCCTTCTCTTCTACAAAGACCCCAGCAGGAGTGGGAGGGTCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp TGGTCAGGTGTTTTCCCAACTGTCCAGTGGACCTTAGGCCCTTTGGCCCAAGTGGTAGGCGATGTGGTGTaGAGGCAGCAGGCCCAGGAG +
Preference number: 4 (lower is better)
Translates to: WSGVFPTVQWTLGPLAQVVGDVV*RQQAQE
Trigger: CTCCTGGGCCTGCTGCCTGCACACCACATCGCCTAC...CACTTGGGCCAAAGGGCCTAAGGTCCACTGGACAGTTGGGAAAACACCTGACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp GGGCGATGCCATTGCAGACCCTCCCACTCCTGCTGGGGTCTTTGTAGAAGAGAACTCCTTCCGCAGGGATaGTGGGAGGGAGTTACCAGC +
Preference number: 4 (lower is better)
Translates to: GRCHCRPSHSCWGLCRRELLPQG*WEGVTS
Trigger: GCTGGTAACTCCCTCCCAGCATCCCTGCGGAAGGAG...TTCTCTTCTACAAAGACCCCAGCAGGAGTGGGAGGGTCTGCAATGGCATCGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp GGCTTCTGGCCAAGGCAGGACAGGGCGATGCCATTGCAGACCCTCCCACTCCTGATCCACACTTGCACATaGGCACACACGTCCTGTGTT +
Preference number: 4 (lower is better)
Translates to: GFWPRQDRAMPLQTLPLLIHTCT*AHTSCV
Trigger: AACACAGGACGTGTGTGCGCATGTGCAAGTGTGGAT...CAGGAGTGGGAGGGTCTGCAATGGCATCGCCCTGTCCTGCCTTGGCCAGAAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp GTAGAAGAGAAGGGTCTGGCGGCACCCAGGGTCACTAGAGTGCAGGTGCAGGCACCCGACTCCCCTCACTaGTGGGCGACATTGAATTTG +
Preference number: 4 (lower is better)
Translates to: VEEKGLAAPRVTRVQVQAPDSPH*WATLNL
Trigger: CAAATTCAATGTCGCCCAGCAGTGAGGGGAGTCGGG...TGCCTGCACCTGCACTCTAGTGACCCTGGGTGCCGCCAGACCCTTCTCTTCTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp GAACAAATTCGCTCCAGCCTCTGCTTTCTGCTTGGCCGCTCAGCGCCCGGGGATATTCGCTCCAGCCTCTaGTTTCTGCTTGGCCGCTCA +
Preference number: 4 (lower is better)
Translates to: EQIRSSLCFLLGRSAPGDIRSSL*FLLGRS
Trigger: TGAGCGGCCAAGCAGAAAGCAGAGGCTGGAGCGAAT...ATCCCCGGGCGCTGAGCGGCCAAGCAGAAAGCAGAGGCTGGAGCGAATTTGTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453356.1
CDS-3UTR GCA 90 bp GGGCGATGCCATTGCAGACCCTCCCACTCCTGCTGGGGTCTTTGTAGAAGAGAATCCTCTCCTGTGGGGTaGAACAGGATGTCCGCTGGG +
Preference number: 4 (lower is better)
Translates to: GRCHCRPSHSCWGLCRRESSPVG*NRMSAG
Trigger: CCCAGCGGACATCCTGTTGCACCCCACAGGAGAGGA...TTCTCTTCTACAAAGACCCCAGCAGGAGTGGGAGGGTCTGCAATGGCATCGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651849.1
CDS-3UTR CCA 90 bp TCTGCCCTCTGCTGCATGGGCAGCGTGGCTCAGCTAGGGAAACCAAGGCAGAAACGGAGGCAGCAGCTGTaGCTGGCAAGAAGCTGGTTT +
Preference number: 4 (lower is better)
Translates to: SALCCMGSVAQLGKPRQKRRQQL*LARSWF
Trigger: AAACCAGCTTCTTGCCAGCCACAGCTGCTGCCTCCG...TTTCTGCCTTGGTTTCCCTAGCTGAGCCACGCTGCCCATGCAGCAGAGGGCAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000171887.8
CDS-3UTR CCA 90 bp GTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCATGGGTCCCCTCCCCACAAGCAGCTCATGGTTGGATaGAGGAACGCAGGGGGCAGC +
Preference number: 4 (lower is better)
Translates to: VLLLGSRVVRIHGSPPHKQLMVG*RNAGGS
Trigger: GCTGCCCCCTGCGTTCCTCCATCCAACCATGAGCTG...CTTGTGGGGAGGGGACCCATGAATCCTGACCACTCTTGAACCCAGAAGGAGGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp CGATGCCATTGCAGACCCTCCCACTCCTGCTGGGGTCTTTGTAGAAGAGAAGGGGCACCAGCTCATGGTTaGATGGAGGAACGCAGGGGG +
Preference number: 4 (lower is better)
Translates to: RCHCRPSHSCWGLCRREGAPAHG*MEERRG
Trigger: CCCCCTGCGTTCCTCCATCCAACCATGAGCTGGTGC...CCCTTCTCTTCTACAAAGACCCCAGCAGGAGTGGGAGGGTCTGCAATGGCATCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp GGACAGGAGCCCCAACATGAAGTTCTCAGTGCAAAGCTTTGGATTCTGGCTTGGGGCTGGAGGTGGGGCTaGACACTCGGGGTGACCCTG +
Preference number: 4 (lower is better)
Translates to: GQEPQHEVLSAKLWILAWGWRWG*TLGVTL
Trigger: CAGGGTCACCCCGAGTGTCCAGCCCCACCTCCAGCC...CCAAGCCAGAATCCAAAGCTTTGCACTGAGAACTTCATGTTGGGGCTCCTGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000310858.10
CDS-3UTR CCA 90 bp CCAAGGCAGGACAGGGCGATGCCATTGCAGACCCTCCCACTCCTGCTGGGGTCTTCCAGTACCTTGGCATaGAGCTTCGTGATGTCAGGT +
Preference number: 4 (lower is better)
Translates to: PRQDRAMPLQTLPLLLGSSSTLA*SFVMSG
Trigger: ACCTGACATCACGAAGCTCCATGCCAAGGTACTGGA...AGACCCCAGCAGGAGTGGGAGGGTCTGCAATGGCATCGCCCTGTCCTGCCTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp GTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCATGGGTCCCCTCCCCACAAGAGCGTGTGTTCCACGTaGTTGGGGGTGGCCGACAGT +
Preference number: 4 (lower is better)
Translates to: VLLLGSRVVRIHGSPPHKSVCST*LGVADS
Trigger: ACTGTCGGCCACCCCCAACCACGTGGAACACACGCT...CTTGTGGGGAGGGGACCCATGAATCCTGACCACTCTTGAACCCAGAAGGAGGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TCTGCCCTCTGCTGCATGGGCAGCGTGGCTCAGCTAGGGAAACCAAGGCAGAAAGCTGGGTGTGGTACATaGCGCCTTGCTTCTCTCGCT +
Preference number: 4 (lower is better)
Translates to: SALCCMGSVAQLGKPRQKAGCGT*RLASLA
Trigger: AGCGAGAGAAGCAAGGCGCCATGTACCACACCCAGC...TTTCTGCCTTGGTTTCCCTAGCTGAGCCACGCTGCCCATGCAGCAGAGGGCAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp GGGGAAGACACCCCGAGCTCAACAGCTGCCTGTTCTGACAGATCTCTTCCTATGCGGGACCTGAGGTGCTaGGTGTGGTACATGGCGCCT +
Preference number: 4 (lower is better)
Translates to: GEDTPSSTAACSDRSLPMRDLRC*VWYMAP
Trigger: AGGCGCCATGTACCACACCCAGCACCTCAGGTCCCG...CATAGGAAGAGATCTGTCAGAACAGGCAGCTGTTGAGCTCGGGGTGTCTTCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TCTGCCCTCTGCTGCATGGGCAGCGTGGCTCAGCTAGGGAAACCAAGGCAGAAAACTTGTCCAGACCGTTaGTCAGTGGGGACAGGGCCT +
Preference number: 4 (lower is better)
Translates to: SALCCMGSVAQLGKPRQKTCPDR*SVGTGP
Trigger: AGGCCCTGTCCCCACTGACCAACGGTCTGGACAAGT...TTTCTGCCTTGGTTTCCCTAGCTGAGCCACGCTGCCCATGCAGCAGAGGGCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp CTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCATCAGGCCCCGCCCGGCTaGCAGACTCGTAGGGGTAGC +
Preference number: 4 (lower is better)
Translates to: LRNWPKVLLLGSRVVRIHQAPPG*QTRRGS
Trigger: GCTACCCCTACGAGTCTGCCAGCCGGGCGGGGCCTG...ATGAATCCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TCTGCAATTCACTTCCCTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATTCGCATGGGGGCCGTGTaGCCAGCATGGGCAGGCCCC +
Preference number: 4 (lower is better)
Translates to: SAIHFPLPTLHFLLSSEIRMGAV*PAWAGP
Trigger: GGGGCCTGCCCATGCTGGCCACACGGCCCCCATGCG...AATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGGGAAGTGAATTGCAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TCTTCTCCCAGACCCTTTCCCATCCCAGCCCATGTTCAAGGCCAGACAGCGCTCAGCGGAACATACCGCTaGGGTCATGGGCATAGTGGG +
Preference number: 4 (lower is better)
Translates to: SSPRPFPIPAHVQGQTALSGTYR*GHGHSG
Trigger: CCCACTATGCCCATGACCCCAGCGGTATGTTCCGCT...GAGCGCTGTCTGGCCTTGAACATGGGCTGGGATGGGAAAGGGTCTGGGAGAAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp CCAGAACACCGTGATAGCAGGCTGATCAAACCGCTCACTTCCTCCCTGTTTTCCTGGGCTCTTTCCTGCTaGCGTGGAGGTGGGCGAGGC +
Preference number: 4 (lower is better)
Translates to: PEHRDSRLIKPLTSSLFSWALSC*RGGGRG
Trigger: GCCTCGCCCACCTCCACGCCAGCAGGAAAGAGCCCA...GGAAAACAGGGAGGAAGTGAGCGGTTTGATCAGCCTGCTATCACGGTGTTCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TCTTCTCCCAGACCCTTTCCCATCCCAGCCCATGTTCAAGGCCAGACAGCGCTCGAGGGCTGGGCCTGCTaGCTACAAGACTCTCCAAGT +
Preference number: 4 (lower is better)
Translates to: SSPRPFPIPAHVQGQTALEGWAC*LQDSPS
Trigger: ACTTGGAGAGTCTTGTAGCCAGCAGGCCCAGCCCTC...GAGCGCTGTCTGGCCTTGAACATGGGCTGGGATGGGAAAGGGTCTGGGAGAAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp GTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCATGGGTCCCCTCCCCACAAGCAGGGAGACTGGGGATaGGGGTCTCTGCCAATGGCT +
Preference number: 4 (lower is better)
Translates to: VLLLGSRVVRIHGSPPHKQGDWG*GSLPMA
Trigger: AGCCATTGGCAGAGACCCCCATCCCCAGTCTCCCTG...CTTGTGGGGAGGGGACCCATGAATCCTGACCACTCTTGAACCCAGAAGGAGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp CCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGGGCAGCAGCGGAGGCTaGCTCCAGGTCCAGCATCAG +
Preference number: 4 (lower is better)
Translates to: PRCTFFSPPKLAQSPPSGGSSGG*LQVQHQ
Trigger: CTGATGCTGGACCTGGAGCCAGCCTCCGCTGCTGCC...CCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp AAGAGAAGGGTCTGGCGGCACCCAGGGTCACTAGAGTGCAGGTGCAGGCACCAGCCAACGAATGCCCACTaGGGATATAGCCAGATCTGG +
Preference number: 4 (lower is better)
Translates to: KRRVWRHPGSLECRCRHQPTNAH*GYSQIW
Trigger: CCAGATCTGGCTATATCCCCAGTGGGCATTCGTTGG...CTGGTGCCTGCACCTGCACTCTAGTGACCCTGGGTGCCGCCAGACCCTTCTCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TTCCTTCGCAGGTCCCCTCTCCATTGTTTTCTCGCCCAATCCTTCCCTCTTGCTAGAGGCCCGTGGGGCTaGCTCAGGGGTTCCCAACGA +
Preference number: 4 (lower is better)
Translates to: FLRRSPLHCFLAQSFPLARGPWG*LRGSQR
Trigger: TCGTTGGGAACCCCTGAGCCAGCCCCACGGGCCTCT...AGCAAGAGGGAAGGATTGGGCGAGAAAACAATGGAGAGGGGACCTGCGAAGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp CCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGAGAGGCCCGTGGGGCTaGCTCAGGGGTTCCCAACGA +
Preference number: 4 (lower is better)
Translates to: PRCTFFSPPKLAQSPPSGRGPWG*LRGSQR
Trigger: TCGTTGGGAACCCCTGAGCCAGCCCCACGGGCCTCT...CCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TCTCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGAGAGGCCCGTGGGGCTaGCTCAGGGGTTCCCAACGA +
Preference number: 4 (lower is better)
Translates to: SLLRNWPKVLLLGSRVVRRGPWG*LRGSQR
Trigger: TCGTTGGGAACCCCTGAGCCAGCCCCACGGGCCTCT...CCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp CGCAGGGATGCTGGGAGGGAGTTACCAGCTTTCTGGCATGAATGGGTCCTCCCGGGCTACGAGGGGATGTaGCTTCTGGAGACTGGTTCT +
Preference number: 4 (lower is better)
Translates to: RRDAGRELPAFWHEWVLPGYEGM*LLETGS
Trigger: AGAACCAGTCTCCAGAAGCCACATCCCCTCGTAGCC...CGGGAGGACCCATTCATGCCAGAAAGCTGGTAACTCCCTCCCAGCATCCCTGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp CTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCATCCGCACCCCACTGGGTaGTGGGCTGCTCGGGGAGGT +
Preference number: 4 (lower is better)
Translates to: LRNWPKVLLLGSRVVRIHPHPTG*WAARGG
Trigger: ACCTCCCCGAGCAGCCCACCACCCAGTGGGGTGCGG...ATGAATCCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATCCAACAGAGGCTGGGTaGGCGTCCGGGGACCCTGGT +
Preference number: 4 (lower is better)
Translates to: SPPKLAQSPPSGFKSGQDPTEAG*ASGDPG
Trigger: ACCAGGGTCCCCGGACGCCCACCCAGCCTCTGTTGG...ATCCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp AATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCATGGGTCCGACTCCAACAGAGGCTaGGTGGGCGTCCGGGGACCC +
Preference number: 4 (lower is better)
Translates to: NWPKVLLLGSRVVRIHGSDSNRG*VGVRGP
Trigger: GGGTCCCCGGACGCCCACCCAGCCTCTGTTGGAGTC...GGACCCATGAATCCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TCTTCTCCCAGACCCTTTCCCATCCCAGCCCATGTTCAAGGCCAGACAGCGCTCTCAAACTGGGACTGCTaGGGGCAGCCATGCTGGGAT +
Preference number: 4 (lower is better)
Translates to: SSPRPFPIPAHVQGQTALSNWDC*GQPCWD
Trigger: ATCCCAGCATGGCTGCCCCCAGCAGTCCCAGTTTGA...GAGCGCTGTCTGGCCTTGAACATGGGCTGGGATGGGAAAGGGTCTGGGAGAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp GCAGACCCTCCCACTCCTGCTGGGGTCTTTGTAGAAGAGAAGGGTCTGGCGGCAGAAGCCAGTGCCTGGTaGACCCATCATCTGGTGATG +
Preference number: 4 (lower is better)
Translates to: ADPPTPAGVFVEEKGLAAEASAW*THHLVM
Trigger: CATCACCAGATGATGGGTCCACCAGGCACTGGCTTC...TGCCGCCAGACCCTTCTCTTCTACAAAGACCCCAGCAGGAGTGGGAGGGTCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp ACAGGGCGATGCCATTGCAGACCCTCCCACTCCTGCTGGGGTCTTTGTAGAAGAGTCGCTGCACTGCTCTaGGGGCTGGAGACAGTGCTA +
Preference number: 4 (lower is better)
Translates to: TGRCHCRPSHSCWGLCRRVAALL*GLETVL
Trigger: TAGCACTGTCTCCAGCCCCCAGAGCAGTGCAGCGAC...TCTTCTACAAAGACCCCAGCAGGAGTGGGAGGGTCTGCAATGGCATCGCCCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TCTCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGCTGGTAGACCCCTGCTaGGTGCCGACACAGGCTGGG +
Preference number: 4 (lower is better)
Translates to: SLLRNWPKVLLLGSRVVRLVDPC*VPTQAG
Trigger: CCCAGCCTGTGTCGGCACCCAGCAGGGGTCTACCAG...CCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TCTCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGTCTGCCGGGACAGTGTaGGTCTCCGATCCTCCGGGG +
Preference number: 4 (lower is better)
Translates to: SLLRNWPKVLLLGSRVVRSAGTV*VSDPPG
Trigger: CCCCGGAGGATCGGAGACCCACACTGTCCCGGCAGA...CCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp CCAGAACACCGTGATAGCAGGCTGATCAAACCGCTCACTTCCTCCCTGTTTTCCTCTGCCGGGACAGTGTaGGTCTCCGATCCTCCGGGG +
Preference number: 4 (lower is better)
Translates to: PEHRDSRLIKPLTSSLFSSAGTV*VSDPPG
Trigger: CCCCGGAGGATCGGAGACCCACACTGTCCCGGCAGA...GGAAAACAGGGAGGAAGTGAGCGGTTTGATCAGCCTGCTATCACGGTGTTCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp CACATGCGCACACACGTCCTGTGTTACCACTGGCCAAGGAAACGCGAGTCTCAGGACTGGACATGCCGCTaGCGACAGGCGAAGACACCT +
Preference number: 4 (lower is better)
Translates to: HMRTHVLCYHWPRKRESQDWTCR*RQAKTP
Trigger: AGGTGTCTTCGCCTGTCGCCAGCGGCATGTCCAGTC...CTGAGACTCGCGTTTCCTTGGCCAGTGGTAACACAGGACGTGTGTGCGCATGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp CCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTGCCCCCACTGGGACTaGACATGCCGCTGGCGACAG +
Preference number: 4 (lower is better)
Translates to: PRCTFFSPPKLAQSPPSGCPHWD*TCRWRQ
Trigger: CTGTCGCCAGCGGCATGTCCAGTCCCAGTGGGGGCA...CCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp AAGAGAAGGGTCTGGCGGCACCCAGGGTCACTAGAGTGCAGGTGCAGGCACCAGCTGCTGCATGATGGTTaGAGGTGGCGAAGACACCTT +
Preference number: 4 (lower is better)
Translates to: KRRVWRHPGSLECRCRHQLLHDG*RWRRHL
Trigger: AAGGTGTCTTCGCCACCTCCAACCATCATGCAGCAG...CTGGTGCCTGCACCTGCACTCTAGTGACCCTGGGTGCCGCCAGACCCTTCTCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp GCAGACCCTCCCACTCCTGCTGGGGTCTTTGTAGAAGAGAAGGGTCTGGCGGCAGCAAGGCAGGGCCAATaGGATGATGGAGTGCTGGTA +
Preference number: 4 (lower is better)
Translates to: ADPPTPAGVFVEEKGLAAARQGQ*DDGVLV
Trigger: TACCAGCACTCCATCATCCCATTGGCCCTGCCTTGC...TGCCGCCAGACCCTTCTCTTCTACAAAGACCCCAGCAGGAGTGGGAGGGTCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp CGCAGGGATGCTGGGAGGGAGTTACCAGCTTTCTGGCATGAATGGGTCCTCCCGGGTCTGCAGTTGAGTTaGCAGGGCCGGAGCTATCTT +
Preference number: 4 (lower is better)
Translates to: RRDAGRELPAFWHEWVLPGLQLS*QGRSYL
Trigger: AAGATAGCTCCGGCCCTGCCAACTCAACTGCAGACC...CGGGAGGACCCATTCATGCCAGAAAGCTGGTAACTCCCTCCCAGCATCCCTGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp ATGTCCCACGGTGGCTCTGTTTGGTTTGACAACCTACCCCACAGGTGGCCAGAATGGTGGCAGCTGGCGTaGGGTCTGCAGCCAACGTCT +
Preference number: 4 (lower is better)
Translates to: MSHGGSVWFDNLPHRWPEWWQLA*GLQPTS
Trigger: AGACGTTGGCTGCAGACCCCACGCCAGCTGCCACCA...TTCTGGCCACCTGTGGGGTAGGTTGTCAAACCAAACAGAGCCACCGTGGGACAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TGGTCAGGTGTTTTCCCAACTGTCCAGTGGACCTTAGGCCCTTTGGCCCAAGTGTGGTGGCAGCTGGCGTaGGGTCTGCAGCCAACGTCT +
Preference number: 4 (lower is better)
Translates to: WSGVFPTVQWTLGPLAQVWWQLA*GLQPTS
Trigger: AGACGTTGGCTGCAGACCCCACGCCAGCTGCCACCA...CACTTGGGCCAAAGGGCCTAAGGTCCACTGGACAGTTGGGAAAACACCTGACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp GCTATCGCTGAGACTCCACCAATTGGTTGGCCTACAGGCCTCACCTCCCGACTCAGCTCAGCAAAGAGGTaGCAGGCGTTGTCCGTGGTG +
Preference number: 4 (lower is better)
Translates to: AIAETPPIGWPTGLTSRLSSAKR*QALSVV
Trigger: CACCACGGACAACGCCTGCCACCTCTTTGCTGAGCT...GAGTCGGGAGGTGAGGCCTGTAGGCCAACCAATTGGTGGAGTCTCAGCGATAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp ACAGGGCGATGCCATTGCAGACCCTCCCACTCCTGCTGGGGTCTTTGTAGAAGAATGGCAGAGGCCGGCTaGTTGGGGTCAAGCTCAGCA +
Preference number: 4 (lower is better)
Translates to: TGRCHCRPSHSCWGLCRRMAEAG*LGSSSA
Trigger: TGCTGAGCTTGACCCCAACCAGCCGGCCTCTGCCAT...TCTTCTACAAAGACCCCAGCAGGAGTGGGAGGGTCTGCAATGGCATCGCCCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp GAGAAGGGTCTGGCGGCACCCAGGGTCACTAGAGTGCAGGTGCAGGCACCAGGAAGGGTTCATCTCTTTTaGCCGGCATTCAGCATGACC +
Preference number: 4 (lower is better)
Translates to: EKGLAAPRVTRVQVQAPGRVHLF*PAFSMT
Trigger: GGTCATGCTGAATGCCGGCCAAAAGAGATGAACCCT...TCCTGGTGCCTGCACCTGCACTCTAGTGACCCTGGGTGCCGCCAGACCCTTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TCTTCTCCCAGACCCTTTCCCATCCCAGCCCATGTTCAAGGCCAGACAGCGCTCAGTGGTCAGGATTCATaGGTCCCCTCCCCACAAGCC +
Preference number: 4 (lower is better)
Translates to: SSPRPFPIPAHVQGQTALSGQDS*VPSPQA
Trigger: GGCTTGTGGGGAGGGGACCCATGAATCCTGACCACT...GAGCGCTGTCTGGCCTTGAACATGGGCTGGGATGGGAAAGGGTCTGGGAGAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp CCAAGGCAGGACAGGGCGATGCCATTGCAGACCCTCCCACTCCTGCTGGGGTCTGTGTCTACAAACACATaGGACAAGGACAAGCCGAGC +
Preference number: 4 (lower is better)
Translates to: PRQDRAMPLQTLPLLLGSVSTNT*DKDKPS
Trigger: GCTCGGCTTGTCCTTGTCCCATGTGTTTGTAGACAC...AGACCCCAGCAGGAGTGGGAGGGTCTGCAATGGCATCGCCCTGTCCTGCCTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp AAGAGAAGGGTCTGGCGGCACCCAGGGTCACTAGAGTGCAGGTGCAGGCACCAGCTGTCACCCATAGCTTaGTTGTTTGTCCCTCCCCTG +
Preference number: 4 (lower is better)
Translates to: KRRVWRHPGSLECRCRHQLSPIA*LFVPPL
Trigger: CAGGGGAGGGACAAACAACCAAGCTATGGGTGACAG...CTGGTGCCTGCACCTGCACTCTAGTGACCCTGGGTGCCGCCAGACCCTTCTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp ACAGGGCGATGCCATTGCAGACCCTCCCACTCCTGCTGGGGTCTTTGTAGAAGACTGGGAGCTGACTGCTaGGCCCCTGGCTTGCTGAAA +
Preference number: 4 (lower is better)
Translates to: TGRCHCRPSHSCWGLCRRLGADC*APGLLK
Trigger: TTTCAGCAAGCCAGGGGCCCAGCAGTCAGCTCCCAG...TCTTCTACAAAGACCCCAGCAGGAGTGGGAGGGTCTGCAATGGCATCGCCCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp ATTGGTTGGCCTACAGGCCTCACCTCCCGACTCCCCTCACTGCTGGGCGACATTCCCTCTTGCTCCCTTTaGGAAAAAGCCACGTGGAGC +
Preference number: 4 (lower is better)
Translates to: IGWPTGLTSRLPSLLGDIPSCSL*EKATWS
Trigger: GCTCCACGTGGCTTTTTCCCAAAGGGAGCAAGAGGG...AATGTCGCCCAGCAGTGAGGGGAGTCGGGAGGTGAGGCCTGTAGGCCAACCAAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp GCAGACCCTCCCACTCCTGCTGGGGTCTTTGTAGAAGAGAAGGGTCTGGCGGCAGGGGAGAAGGAATCCTaGCCATTGGTGTCCACAGCT +
Preference number: 4 (lower is better)
Translates to: ADPPTPAGVFVEEKGLAAGEKES*PLVSTA
Trigger: AGCTGTGGACACCAATGGCCAGGATTCCTTCTCCCC...TGCCGCCAGACCCTTCTCTTCTACAAAGACCCCAGCAGGAGTGGGAGGGTCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp GCTATCGCTGAGACTCCACCAATTGGTTGGCCTACAGGCCTCACCTCCCGACTCGTGTGGGGGCAGGATTaGGTGTCTGCCTTGACTCAC +
Preference number: 4 (lower is better)
Translates to: AIAETPPIGWPTGLTSRLVWGQD*VSALTH
Trigger: GTGAGTCAAGGCAGACACCCAATCCTGCCCCCACAC...GAGTCGGGAGGTGAGGCCTGTAGGCCAACCAATTGGTGGAGTCTCAGCGATAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TCTCCTGGCCAGTCTCAGAAGACCCAGGGATCCTCAAAAACCAGGGGAGAAGGAGGAGGACCCCGAGTGTaGGGGCAGGATTGGGTGTCT +
Preference number: 4 (lower is better)
Translates to: SPGQSQKTQGSSKTRGEGGGPRV*GQDWVS
Trigger: AGACACCCAATCCTGCCCCCACACTCGGGGTCCTCC...TCCTTCTCCCCTGGTTTTTGAGGATCCCTGGGTCTTCTGAGACTGGCCAGGAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TGGTCAGGTGTTTTCCCAACTGTCCAGTGGACCTTAGGCCCTTTGGCCCAAGTGGGAGGACCCCGAGTGTaGGGGCAGGATTGGGTGTCT +
Preference number: 4 (lower is better)
Translates to: WSGVFPTVQWTLGPLAQVGGPRV*GQDWVS
Trigger: AGACACCCAATCCTGCCCCCACACTCGGGGTCCTCC...CACTTGGGCCAAAGGGCCTAAGGTCCACTGGACAGTTGGGAAAACACCTGACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp CCTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCCTCCTCCAGGGCCTGGACCTaGGGTAAAGGGCTGCTCTGG +
Preference number: 4 (lower is better)
Translates to: PLPTLHFLLSSEIGPKSSSRAWT*GKGLLW
Trigger: CCAGAGCAGCCCTTTACCCCAGGTCCAGGCCCTGGA...GGAGGACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp GGGCGATGCCATTGCAGACCCTCCCACTCCTGCTGGGGTCTTTGTAGAAGAGAACCCACCCTGCCCCTCTaGGTGAACCACTTCTCACCT +
Preference number: 4 (lower is better)
Translates to: GRCHCRPSHSCWGLCRREPTLPL*VNHFSP
Trigger: AGGTGAGAAGTGGTTCACCCAGAGGGGCAGGGTGGG...TTCTCTTCTACAAAGACCCCAGCAGGAGTGGGAGGGTCTGCAATGGCATCGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp ACAGGGCGATGCCATTGCAGACCCTCCCACTCCTGCTGGGGTCTTTGTAGAAGACCCACCCTGCCCCTCTaGGTGAACCACTTCTCACCT +
Preference number: 4 (lower is better)
Translates to: TGRCHCRPSHSCWGLCRRPTLPL*VNHFSP
Trigger: AGGTGAGAAGTGGTTCACCCAGAGGGGCAGGGTGGG...TCTTCTACAAAGACCCCAGCAGGAGTGGGAGGGTCTGCAATGGCATCGCCCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TCTCCTGGCCAGTCTCAGAAGACCCAGGGATCCTCAAAAACCAGGGGAGAAGGATCCGGGGCTCTCCTGTaGGGTGCAACAGGATGTCCG +
Preference number: 4 (lower is better)
Translates to: SPGQSQKTQGSSKTRGEGSGALL*GATGCP
Trigger: CGGACATCCTGTTGCACCCCACAGGAGAGCCCCGGA...TCCTTCTCCCCTGGTTTTTGAGGATCCCTGGGTCTTCTGAGACTGGCCAGGAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000646520.1
CDS-3UTR CCA 90 bp CCCAGCTTGATTTCCCCTTGCAAAGCAGTTGAGTTAGGGAGACAGAGCTTTTCCCCGAGAGTGGGCGCCTaGGGCGCGAGGGTCGGAAGA +
Preference number: 4 (lower is better)
Translates to: PSLISPCKAVELGRQSFSPRVGA*GARVGR
Trigger: TCTTCCGACCCTCGCGCCCCAGGCGCCCACTCTCGG...GGAAAAGCTCTGTCTCCCTAACTCAACTGCTTTGCAAGGGGAAATCAAGCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000646520.1
CDS-3UTR TCA 90 bp TCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATGCTGGACACTCGGGGTaGCCCTGGTGGAGCCGTTGT +
Preference number: 4 (lower is better)
Translates to: SPPKLAQSPPSGFKSGQDAGHSG*PWWSRC
Trigger: ACAACGGCTCCACCAGGGTCACCCCGAGTGTCCAGC...ATCCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp AATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCATGGGTCCGCTGGACACTCGGGGTaGCCCTGGTGGAGCCGTTGT +
Preference number: 4 (lower is better)
Translates to: NWPKVLLLGSRVVRIHGSAGHSG*PWWSRC
Trigger: ACAACGGCTCCACCAGGGTCACCCCGAGTGTCCAGC...GGACCCATGAATCCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp GTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCATGGGTCCCCTCCCCACAAGTGGCATGGAGCTTCGTaGTGTCAGGTCTCCGCTCAG +
Preference number: 4 (lower is better)
Translates to: VLLLGSRVVRIHGSPPHKWHGAS*CQVSAQ
Trigger: CTGAGCGGAGACCTGACATCACGAAGCTCCATGCCA...CTTGTGGGGAGGGGACCCATGAATCCTGACCACTCTTGAACCCAGAAGGAGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp CGCAGGGATGCTGGGAGGGAGTTACCAGCTTTCTGGCATGAATGGGTCCTCCCGGCTTGTTGTTCATTTTaGTGGAGCCGGAGAGCAGGC +
Preference number: 4 (lower is better)
Translates to: RRDAGRELPAFWHEWVLPACCSF*WSRRAG
Trigger: GCCTGCTCTCCGGCTCCATCAAAATGAACAACAAGC...CGGGAGGACCCATTCATGCCAGAAAGCTGGTAACTCCCTCCCAGCATCCCTGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp GCAATTCACTTCCCTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCCTGCTGGGCGGGACCTaGGGTGCTGGGTGTGGTACA +
Preference number: 4 (lower is better)
Translates to: AIHFPLPTLHFLLSSEIGLLGGT*GAGCGT
Trigger: TGTACCACACCCAGCACCTCAGGTCCCGCCCAGCAG...GCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGGGAAGTGAATTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp CACATGCGCACACACGTCCTGTGTTACCACTGGCCAAGGAAACGCGAGTCTCAGCTAACGCCCCACCATTaGCATGAACCTGGGCTGGGA +
Preference number: 4 (lower is better)
Translates to: HMRTHVLCYHWPRKRESQLTPHH*HEPGLG
Trigger: TCCCAGCCCAGGTTCATGTCAATGGTGGGGCGTTAG...CTGAGACTCGCGTTTCCTTGGCCAGTGGTAACACAGGACGTGTGTGCGCATGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp GTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCATGGGTCCCCTCCCCACAAGCTAACGCCCCACCATTaGCATGAACCTGGGCTGGGA +
Preference number: 4 (lower is better)
Translates to: VLLLGSRVVRIHGSPPHKLTPHH*HEPGLG
Trigger: TCCCAGCCCAGGTTCATGTCAATGGTGGGGCGTTAG...CTTGTGGGGAGGGGACCCATGAATCCTGACCACTCTTGAACCCAGAAGGAGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp TGCAGGCACCAGGAGAGAGCCTCTGTCACCCATAGCTTGGTTGTTTGTCCCTCCCTAACGCCCCACCATTaGCATGAACCTGGGCTGGGA +
Preference number: 4 (lower is better)
Translates to: CRHQERASVTHSLVVCPSLTPHH*HEPGLG
Trigger: TCCCAGCCCAGGTTCATGTCAATGGTGGGGCGTTAG...GGAGGGACAAACAACCAAGCTATGGGTGACAGAGGCTCTCTCCTGGTGCCTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp ATGTCCCACGGTGGCTCTGTTTGGTTTGACAACCTACCCCACAGGTGGCCAGAAGTCAGTGGATGGGACTaGCGGGAGGATCCAGAGAGG +
Preference number: 4 (lower is better)
Translates to: MSHGGSVWFDNLPHRWPEVSGWD*REDPER
Trigger: CCTCTCTGGATCCTCCCGTCAGTCCCATCCACTGAC...TTCTGGCCACCTGTGGGGTAGGTTGTCAAACCAAACAGAGCCACCGTGGGACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp CCTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCCTCCGTCAGTGGATGGGACTaGCGGGAGGATCCAGAGAGG +
Preference number: 4 (lower is better)
Translates to: PLPTLHFLLSSEIGPKSSVSGWD*REDPER
Trigger: CCTCTCTGGATCCTCCCGTCAGTCCCATCCACTGAC...GGAGGACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp CCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGGCTCCGGGGCTCTTCTaGCAGCCTGACCACCACCTT +
Preference number: 4 (lower is better)
Translates to: PRCTFFSPPKLAQSPPSGAPGLF*QPDHHL
Trigger: AAGGTGGTGGTCAGGCTGTCAGAAGAGCCCCGGAGC...CCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000171887.8
ENST00000651849.1
CDS-3UTR TCA 90 bp GCAATTCACTTCCCTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCTTGGGCTCAGAGTCCTaGGCTCGGGGTCCAGCCACC +
Preference number: 4 (lower is better)
Translates to: AIHFPLPTLHFLLSSEIGLGSES*ARGPAT
Trigger: GGTGGCTGGACCCCGAGCTCAGGACTCTGAGCCCAA...GCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGGGAAGTGAATTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp ATGTCCCACGGTGGCTCTGTTTGGTTTGACAACCTACCCCACAGGTGGCCAGAAAAGTGCTGTCAGCACTaGGGATGGGGCTGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: MSHGGSVWFDNLPHRWPEKCCQH*GWGCWW
Trigger: CCACCAGCAGCCCCATCCTCAGTGCTGACAGCACTT...TTCTGGCCACCTGTGGGGTAGGTTGTCAAACCAAACAGAGCCACCGTGGGACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp ATGCGCACACACGTCCTGTGTTACCACTGGCCAAGGAAACGCGAGTCTCAGGATAAGTGCTGTCAGCACTaGGGATGGGGCTGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: MRTHVLCYHWPRKRESQDKCCQH*GWGCWW
Trigger: CCACCAGCAGCCCCATCCTCAGTGCTGACAGCACTT...ATCCTGAGACTCGCGTTTCCTTGGCCAGTGGTAACACAGGACGTGTGTGCGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp GTAGAAGAGAAGGGTCTGGCGGCACCCAGGGTCACTAGAGTGCAGGTGCAGGCAGCTGAAATGCTGAAGTaGGTAGTCGGGGCTGCTGTA +
Preference number: 4 (lower is better)
Translates to: VEEKGLAAPRVTRVQVQAAEMLK*VVGAAV
Trigger: TACAGCAGCCCCGACTACTCACTTCAGCATTTCAGC...TGCCTGCACCTGCACTCTAGTGACCCTGGGTGCCGCCAGACCCTTCTCTTCTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp CCTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCCTCCCCAGCCACACTGAACTaGGCTCGAGCCTGGCTTTCC +
Preference number: 4 (lower is better)
Translates to: PLPTLHFLLSSEIGPKSSPATLN*ARAWLS
Trigger: GGAAAGCCAGGCTCGAGCTCAGTTCAGTGTGGCTGG...GGAGGACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp AATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCATGGGTCCGGACGCCAGCCACACTaGACTGAGCTCGAGCCTGGC +
Preference number: 4 (lower is better)
Translates to: NWPKVLLLGSRVVRIHGSGRQPH*TELEPG
Trigger: GCCAGGCTCGAGCTCAGTTCAGTGTGGCTGGCGTCC...GGACCCATGAATCCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp ACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGTTCTGTGGCGCGCCTaGGGGCTCCCAGGCACCGTG +
Preference number: 4 (lower is better)
Translates to: TFFSPPKLAQSPPSGFKSVLWRA*GLPGTV
Trigger: CACGGTGCCTGGGAGCCCTCAGGCGCGCCACAGAAC...ACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp GCAATTCACTTCCCTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCCAGCCATGCTGGGATTaGTGGCCCGCCAGCCGAAGC +
Preference number: 4 (lower is better)
Translates to: AIHFPLPTLHFLLSSEIGQPCWD*WPASRS
Trigger: GCTTCGGCTGGCGGGCCATCAATCCCAGCATGGCTG...GCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGGGAAGTGAATTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp TTGGAGGCTTTGGGTTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTGCCAGGTTGCCTTGGTaGGCCCCAGGGTGCCGGCCC +
Preference number: 4 (lower is better)
Translates to: LEALGFCSFHLPRGIQVLARLPW*APGCRP
Trigger: GGGCCGGCACCCTGGGGCTCACCAAGGCAACCTGGC...AAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAACCCAAAGCCTCCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp CCCAACTGTCCAGTGGACCTTAGGCCCTTTGGCCCAAGTGCAAGCCTTCTGCCCGCTATTGCATTGCTATaGAGACCGGAGGCCAGGTTG +
Preference number: 4 (lower is better)
Translates to: PNCPVDLRPFGPSASLLPAIALL*RPEARL
Trigger: CAACCTGGCCTCCGGTCTTCATAGCAATGCAATAGC...GGGCAGAAGGCTTGCACTTGGGCCAAAGGGCCTAAGGTCCACTGGACAGTTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp ATGTCCCACGGTGGCTCTGTTTGGTTTGACAACCTACCCCACAGGTGGCCAGAATGCCCGGTCTCCCACTaGCATCCTTCGCTTCTCTGG +
Preference number: 4 (lower is better)
Translates to: MSHGGSVWFDNLPHRWPECPVSH*HPSLLW
Trigger: CCAGAGAAGCGAAGGATGTCAGTGGGAGACCGGGCA...TTCTGGCCACCTGTGGGGTAGGTTGTCAAACCAAACAGAGCCACCGTGGGACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp ATGTCCCACGGTGGCTCTGTTTGGTTTGACAACCTACCCCACAGGTGGCCAGAAGCGCCTCGGAAGGAGTaGCTGTCGCGGATGATGAAG +
Preference number: 4 (lower is better)
Translates to: MSHGGSVWFDNLPHRWPEAPRKE*LSRMMK
Trigger: CTTCATCATCCGCGACAGTCACTCCTTCCGAGGCGC...TTCTGGCCACCTGTGGGGTAGGTTGTCAAACCAAACAGAGCCACCGTGGGACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp CCTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCCTCCGCGCCTCGGAAGGAGTaGCTGTCGCGGATGATGAAG +
Preference number: 4 (lower is better)
Translates to: PLPTLHFLLSSEIGPKSSAPRKE*LSRMMK
Trigger: CTTCATCATCCGCGACAGTCACTCCTTCCGAGGCGC...GGAGGACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp GTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCATGGGTCCCCTCCCCACAAGGGTCTCGGTTTGGAATaGCCAGCTTGCAAGGCAGGG +
Preference number: 4 (lower is better)
Translates to: VLLLGSRVVRIHGSPPHKGLGLE*PACKAG
Trigger: CCCTGCCTTGCAAGCTGGTCATTCCAAACCGAGACC...CTTGTGGGGAGGGGACCCATGAATCCTGACCACTCTTGAACCCAGAAGGAGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp ACAGGGCGATGCCATTGCAGACCCTCCCACTCCTGCTGGGGTCTTTGTAGAAGAGGTCTCGGTTTGGAATaGCCAGCTTGCAAGGCAGGG +
Preference number: 4 (lower is better)
Translates to: TGRCHCRPSHSCWGLCRRGLGLE*PACKAG
Trigger: CCCTGCCTTGCAAGCTGGTCATTCCAAACCGAGACC...TCTTCTACAAAGACCCCAGCAGGAGTGGGAGGGTCTGCAATGGCATCGCCCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp CGATGCCATTGCAGACCCTCCCACTCCTGCTGGGGTCTTTGTAGAAGAGAAGGGGGTCTCGGTTTGGAATaGCCAGCTTGCAAGGCAGGG +
Preference number: 4 (lower is better)
Translates to: RCHCRPSHSCWGLCRREGGLGLE*PACKAG
Trigger: CCCTGCCTTGCAAGCTGGTCATTCCAAACCGAGACC...CCCTTCTCTTCTACAAAGACCCCAGCAGGAGTGGGAGGGTCTGCAATGGCATCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp CCTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCCTCCTGGCCTGTGGCCCAGTaGGTGACTCCATGTCCACAG +
Preference number: 4 (lower is better)
Translates to: PLPTLHFLLSSEIGPKSSWPVAQ*VTPCPQ
Trigger: CTGTGGACATGGAGTCACTCACTGGGCCACAGGCCA...GGAGGACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp GTAGAAGAGAAGGGTCTGGCGGCACCCAGGGTCACTAGAGTGCAGGTGCAGGCAGGTTGTCAGTCAGAGTaGTTCCCTGGGCAGAGACTT +
Preference number: 4 (lower is better)
Translates to: VEEKGLAAPRVTRVQVQAGCQSE*FPGQRL
Trigger: AAGTCTCTGCCCAGGGAATCACTCTGACTGACAACC...TGCCTGCACCTGCACTCTAGTGACCCTGGGTGCCGCCAGACCCTTCTCTTCTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp GTGAGGAAGGGAAAAGCGACCGTGAAAGCTGACCCCAGACTCAGTCCTGGGCCCGGTTGTCAGTCAGAGTaGTTCCCTGGGCAGAGACTT +
Preference number: 4 (lower is better)
Translates to: VRKGKATVKADPRLSPGPGCQSE*FPGQRL
Trigger: AAGTCTCTGCCCAGGGAATCACTCTGACTGACAACC...GGGCCCAGGACTGAGTCTGGGGTCAGCTTTCACGGTCGCTTTTCCCTTCCTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp AAGAGAAGGGTCTGGCGGCACCCAGGGTCACTAGAGTGCAGGTGCAGGCACCAGGAGGGTAGTGGCGTCTaGAAAAGAGCTTTCTCTGGT +
Preference number: 4 (lower is better)
Translates to: KRRVWRHPGSLECRCRHQEGSGV*KRAFSG
Trigger: ACCAGAGAAAGCTCTTTTTCAGACGCCACTACCCTC...CTGGTGCCTGCACCTGCACTCTAGTGACCCTGGGTGCCGCCAGACCCTTCTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp ATGCGCACACACGTCCTGTGTTACCACTGGCCAAGGAAACGCGAGTCTCAGGATCCTTGGAGACGAAGTTaGCGATGGCAGAGGCCGGCT +
Preference number: 4 (lower is better)
Translates to: MRTHVLCYHWPRKRESQDPWRRS*RWQRPA
Trigger: AGCCGGCCTCTGCCATCGTCAACTTCGTCTCCAAGG...ATCCTGAGACTCGCGTTTCCTTGGCCAGTGGTAACACAGGACGTGTGTGCGCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp CCAAGGCAGGACAGGGCGATGCCATTGCAGACCCTCCCACTCCTGCTGGGGTCTAACAGCTGCCTGTTCTaGCAGATCTCTTCCTATGGA +
Preference number: 4 (lower is better)
Translates to: PRQDRAMPLQTLPLLLGSNSCLF*QISSYG
Trigger: TCCATAGGAAGAGATCTGTCAGAACAGGCAGCTGTT...AGACCCCAGCAGGAGTGGGAGGGTCTGCAATGGCATCGCCCTGTCCTGCCTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp CGATGCCATTGCAGACCCTCCCACTCCTGCTGGGGTCTTTGTAGAAGAGAAGGGGCAGGTAAGCAGGTCTaGGATAAGGCTGGTCCAGGG +
Preference number: 4 (lower is better)
Translates to: RCHCRPSHSCWGLCRREGAGKQV*DKAGPG
Trigger: CCCTGGACCAGCCTTATCTCAGACCTGCTTACCTGC...CCCTTCTCTTCTACAAAGACCCCAGCAGGAGTGGGAGGGTCTGCAATGGCATCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp ATGCGCACACACGTCCTGTGTTACCACTGGCCAAGGAAACGCGAGTCTCAGGATAACCCCTCCCAATGCTaGGCCCCACACAGTCTAGGG +
Preference number: 4 (lower is better)
Translates to: MRTHVLCYHWPRKRESQDNPSQC*APHSLG
Trigger: CCCTAGACTGTGTGGGGCTCAGCATTGGGAGGGGTT...ATCCTGAGACTCGCGTTTCCTTGGCCAGTGGTAACACAGGACGTGTGTGCGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp TGGTCAGGTGTTTTCCCAACTGTCCAGTGGACCTTAGGCCCTTTGGCCCAAGTGGGGCCCCTGGCTTGCTaGAAAGTAAGGGGGCCAAAG +
Preference number: 4 (lower is better)
Translates to: WSGVFPTVQWTLGPLAQVGPLAC*KVRGPK
Trigger: CTTTGGCCCCCTTACTTTTCAGCAAGCCAGGGGCCC...CACTTGGGCCAAAGGGCCTAAGGTCCACTGGACAGTTGGGAAAACACCTGACCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp ACCCTCCTTTCCAACTCCCTGAAACAGAACGTCCACACTGACACAGCTCCTTGGACACATCCTGGGAGCTaGCTGCTGGGCCCCTGGCTT +
Preference number: 4 (lower is better)
Translates to: TLLSNSLKQNVHTDTAPWTHPGS*LLGPWL
Trigger: AAGCCAGGGGCCCAGCAGTCAGCTCCCAGGATGTGT...CCAAGGAGCTGTGTCAGTGTGGACGTTCTGTTTCAGGGAGTTGGAAAGGAGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp TCTGCCCTCTGCTGCATGGGCAGCGTGGCTCAGCTAGGGAAACCAAGGCAGAAACACCTGGGCTATCGCTaGGACTCCACCAATTGGTTG +
Preference number: 4 (lower is better)
Translates to: SALCCMGSVAQLGKPRQKHLGYR*DSTNWL
Trigger: CAACCAATTGGTGGAGTCTCAGCGATAGCCCAGGTG...TTTCTGCCTTGGTTTCCCTAGCTGAGCCACGCTGCCCATGCAGCAGAGGGCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp TCTGCCCTCTGCTGCATGGGCAGCGTGGCTCAGCTAGGGAAACCAAGGCAGAAACCACCTCACGGAGGTTaGTCCGGAAGTTCTCCTCAT +
Preference number: 4 (lower is better)
Translates to: SALCCMGSVAQLGKPRQKPPHGG*SGSSPH
Trigger: ATGAGGAGAACTTCCGGAGCAACCTCCGTGAGGTGG...TTTCTGCCTTGGTTTCCCTAGCTGAGCCACGCTGCCCATGCAGCAGAGGGCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp GAGAAGGGTCTGGCGGCACCCAGGGTCACTAGAGTGCAGGTGCAGGCACCAGGACACTGGCAGAAATGTTaGTGTAGTGCATGTAAGCCG +
Preference number: 4 (lower is better)
Translates to: EKGLAAPRVTRVQVQAPGHWQKC*CSACKP
Trigger: CGGCTTACATGCACTACAGCAACATTTCTGCCAGTG...TCCTGGTGCCTGCACCTGCACTCTAGTGACCCTGGGTGCCGCCAGACCCTTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp CCCAACTGTCCAGTGGACCTTAGGCCCTTTGGCCCAAGTGCAAGCCTTCTGCCCAAGTTGGGGATGCCGTaGATGATCACGTGGTGCAGA +
Preference number: 4 (lower is better)
Translates to: PNCPVDLRPFGPSASLLPKLGMP*MITWCR
Trigger: TCTGCACCACGTGATCATGCACGGCATCCCCAACTT...GGGCAGAAGGCTTGCACTTGGGCCAAAGGGCCTAAGGTCCACTGGACAGTTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp CCTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCCTCCTGGAGGCTGTGGAGTTaGCCGAGTCGCTGCTCACAG +
Preference number: 4 (lower is better)
Translates to: PLPTLHFLLSSEIGPKSSWRLWS*PSRCSQ
Trigger: CTGTGAGCAGCGACTCGGGCAACTCCACAGCCTCCA...GGAGGACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp TCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATGGGCGGGACCTGAGGTaGTGGGTGTGGTACATGGCG +
Preference number: 4 (lower is better)
Translates to: SPPKLAQSPPSGFKSGQDGRDLR*WVWYMA
Trigger: CGCCATGTACCACACCCAGCACCTCAGGTCCCGCCC...ATCCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp GTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCATGGGTCCCCTCCCCACAAGAGAGTGTGCCCATGCTaGCCGCACTGTGACCATCCT +
Preference number: 4 (lower is better)
Translates to: VLLLGSRVVRIHGSPPHKRVCPC*PHCDHP
Trigger: AGGATGGTCACAGTGCGGGCAGCATGGGCACACTCT...CTTGTGGGGAGGGGACCCATGAATCCTGACCACTCTTGAACCCAGAAGGAGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp CCTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCCTCCAAGTGGGCTCTTTCCTaGTGGCGTGGAGGTGGGCGA +
Preference number: 4 (lower is better)
Translates to: PLPTLHFLLSSEIGPKSSKWALS*WRGGGR
Trigger: TCGCCCACCTCCACGCCAGCAGGAAAGAGCCCACTT...GGAGGACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp TCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATGGGGGCTCTGCAGGCTaGTTCTCCCGAGCCTGTACC +
Preference number: 4 (lower is better)
Translates to: SPPKLAQSPPSGFKSGQDGGSAG*FSRACT
Trigger: GGTACAGGCTCGGGAGAAGCAGCCTGCAGAGCCCCC...ATCCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp AATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCATGGGTCCGGGGGCTCTGCAGGCTaGTTCTCCCGAGCCTGTACC +
Preference number: 4 (lower is better)
Translates to: NWPKVLLLGSRVVRIHGSGGSAG*FSRACT
Trigger: GGTACAGGCTCGGGAGAAGCAGCCTGCAGAGCCCCC...GGACCCATGAATCCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp CTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCATAGGGGCTGGGGGCTCTaGAGGCTGCTTCTCCCGAGC +
Preference number: 4 (lower is better)
Translates to: LRNWPKVLLLGSRVVRIHRGWGL*RLLLPS
Trigger: GCTCGGGAGAAGCAGCCTGCAGAGCCCCCAGCCCCT...ATGAATCCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp GTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCATGGGTCCCCTCCCCACAAGAGCCACCGCTGTCCGTaGCACAGACTCCACATAGCT +
Preference number: 4 (lower is better)
Translates to: VLLLGSRVVRIHGSPPHKSHRCP*HRLHIA
Trigger: AGCTATGTGGAGTCTGTGGCACGGACAGCGGTGGCT...CTTGTGGGGAGGGGACCCATGAATCCTGACCACTCTTGAACCCAGAAGGAGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp CCTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCCTCCGGCTGCTGTAGCTACTaGCCACAGTCGGGAGAGGAG +
Preference number: 4 (lower is better)
Translates to: PLPTLHFLLSSEIGPKSSGCCSY*PQSGEE
Trigger: CTCCTCTCCCGACTGTGGGCAGTAGCTACAGCAGCC...GGAGGACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp CGATGCCATTGCAGACCCTCCCACTCCTGCTGGGGTCTTTGTAGAAGAGAAGGGGTGAGTAGTCGGGGCTaGTGTAGCTACTGCCCACAG +
Preference number: 4 (lower is better)
Translates to: RCHCRPSHSCWGLCRREGVSSRG*CSYCPQ
Trigger: CTGTGGGCAGTAGCTACAGCAGCCCCGACTACTCAC...CCCTTCTCTTCTACAAAGACCCCAGCAGGAGTGGGAGGGTCTGCAATGGCATCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp CCTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCCTCCAACCTGGTAGACCCCTaGTGGGTGCCGACACAGGCT +
Preference number: 4 (lower is better)
Translates to: PLPTLHFLLSSEIGPKSSNLVDP*WVPTQA
Trigger: AGCCTGTGTCGGCACCCAGCAGGGGTCTACCAGGTT...GGAGGACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp TTCCTTCGCAGGTCCCCTCTCCATTGTTTTCTCGCCCAATCCTTCCCTCTTGCTCATAGTTGGGGAGGCTaGCTGCCCGGTCTCCCACTG +
Preference number: 4 (lower is better)
Translates to: FLRRSPLHCFLAQSFPLAHSWGG*LPGLPL
Trigger: CAGTGGGAGACCGGGCAGGCAGCCTCCCCAACTATG...AGCAAGAGGGAAGGATTGGGCGAGAAAACAATGGAGAGGGGACCTGCGAAGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp ATGTCCCACGGTGGCTCTGTTTGGTTTGACAACCTACCCCACAGGTGGCCAGAAAGAAGGAGACGGTGCTaGCCCCACTGGGACTGGACA +
Preference number: 4 (lower is better)
Translates to: MSHGGSVWFDNLPHRWPERRRRC*PHWDWT
Trigger: TGTCCAGTCCCAGTGGGGGCAGCACCGTCTCCTTCT...TTCTGGCCACCTGTGGGGTAGGTTGTCAAACCAAACAGAGCCACCGTGGGACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp GAGAAGGGTCTGGCGGCACCCAGGGTCACTAGAGTGCAGGTGCAGGCACCAGGAGAGGCTTTGGGTTTTTaGAGTTTCCATCTACCCAGG +
Preference number: 4 (lower is better)
Translates to: EKGLAAPRVTRVQVQAPGEALGF*SFHLPR
Trigger: CCTGGGTAGATGGAAACTGCAAAAACCCAAAGCCTC...TCCTGGTGCCTGCACCTGCACTCTAGTGACCCTGGGTGCCGCCAGACCCTTCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp GTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCATGGGTCCCCTCCCCACAAGTGTTTGTCCCTCCCCTaGTGCACTGCCACCACCAAC +
Preference number: 4 (lower is better)
Translates to: VLLLGSRVVRIHGSPPHKCLSLP*CTATTN
Trigger: GTTGGTGGTGGCAGTGCAGCAGGGGAGGGACAAACA...CTTGTGGGGAGGGGACCCATGAATCCTGACCACTCTTGAACCCAGAAGGAGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp CTTCCCTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCGGCAGGACAGGGCGATaGCATTGCAGACCCTCCCAC +
Preference number: 4 (lower is better)
Translates to: LPSPHVALSSLLRNWPKVGRTGR*HCRPSH
Trigger: GTGGGAGGGTCTGCAATGGCATCGCCCTGTCCTGCC...GACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGGGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp CCTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCCTCCAAGCCTTCTGCCCTCTaGTGCATGGGCAGCGTGGCT +
Preference number: 4 (lower is better)
Translates to: PLPTLHFLLSSEIGPKSSKPSAL*CMGSVA
Trigger: AGCCACGCTGCCCATGCAGCAGAGGGCAGAAGGCTT...GGAGGACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp ATGTCCCACGGTGGCTCTGTTTGGTTTGACAACCTACCCCACAGGTGGCCAGAAACACTCGCTCAGGCCTaGAGAGTCAGGGACAGCTCC +
Preference number: 4 (lower is better)
Translates to: MSHGGSVWFDNLPHRWPETLAQA*RVRDSS
Trigger: GGAGCTGTCCCTGACTCTGCAGGCCTGAGCGAGTGT...TTCTGGCCACCTGTGGGGTAGGTTGTCAAACCAAACAGAGCCACCGTGGGACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp TGGTCAGGTGTTTTCCCAACTGTCCAGTGGACCTTAGGCCCTTTGGCCCAAGTGACCCATGTCCCCGCATaGTCACACACTCGCTCAGGC +
Preference number: 4 (lower is better)
Translates to: WSGVFPTVQWTLGPLAQVTHVPA*SHTRSG
Trigger: GCCTGAGCGAGTGTGTGAGCATGCGGGGACATGGGT...CACTTGGGCCAAAGGGCCTAAGGTCCACTGGACAGTTGGGAAAACACCTGACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp CCCAACTGTCCAGTGGACCTTAGGCCCTTTGGCCCAAGTGCAAGCCTTCTGCCCACACGCACCTATGTGTaGCATACACACCCATGTCCC +
Preference number: 4 (lower is better)
Translates to: PNCPVDLRPFGPSASLLPTRTYV*HTHPCP
Trigger: GGGACATGGGTGTGTATGGCACACATAGGTGCGTGT...GGGCAGAAGGCTTGCACTTGGGCCAAAGGGCCTAAGGTCCACTGGACAGTTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp TTCCTTCGCAGGTCCCCTCTCCATTGTTTTCTCGCCCAATCCTTCCCTCTTGCTTGGAGGGGCTGGCCATaGATGCAAGGTGGGCTGTGG +
Preference number: 4 (lower is better)
Translates to: FLRRSPLHCFLAQSFPLAWRGWP*MQGGLW
Trigger: CCACAGCCCACCTTGCATGCATGGCCAGCCCCTCCA...AGCAAGAGGGAAGGATTGGGCGAGAAAACAATGGAGAGGGGACCTGCGAAGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp TGGTCAGGTGTTTTCCCAACTGTCCAGTGGACCTTAGGCCCTTTGGCCCAAGTGAGGTGTGTGCATGGGTaGACAGCCCGCCGTGACACA +
Preference number: 4 (lower is better)
Translates to: WSGVFPTVQWTLGPLAQVRCVHG*TARRDT
Trigger: TGTGTCACGGCGGGCTGTGCACCCATGCACACACCT...CACTTGGGCCAAAGGGCCTAAGGTCCACTGGACAGTTGGGAAAACACCTGACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp GTAGAAGAGAAGGGTCTGGCGGCACCCAGGGTCACTAGAGTGCAGGTGCAGGCAGCAGGATTGGGTGTCTaGCTTGACTCACAGGATCTC +
Preference number: 4 (lower is better)
Translates to: VEEKGLAAPRVTRVQVQAAGLGV*LDSQDL
Trigger: GAGATCCTGTGAGTCAAGGCAGACACCCAATCCTGC...TGCCTGCACCTGCACTCTAGTGACCCTGGGTGCCGCCAGACCCTTCTCTTCTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp CCAGAACACCGTGATAGCAGGCTGATCAAACCGCTCACTTCCTCCCTGTTTTCCGCTGCTCTGGGACTCTaGCCCCCAACCTCTTGGAGG +
Preference number: 4 (lower is better)
Translates to: PEHRDSRLIKPLTSSLFSAALGL*PPTSWR
Trigger: CCTCCAAGAGGTTGGGGGGCAGAGTCCCAGAGCAGC...GGAAAACAGGGAGGAAGTGAGCGGTTTGATCAGCCTGCTATCACGGTGTTCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp GCACAACGACCAATTAGGCTGGCAGCCACTGAAACCTCAGAACAAATTCGCTCCCCAGCCTCTGCTTTCTaGTTGGCCGCTCAGCGCCCG +
Preference number: 4 (lower is better)
Translates to: AQRPIRLAATETSEQIRSPASAF*LAAQRP
Trigger: CGGGCGCTGAGCGGCCAAGCAGAAAGCAGAGGCTGG...GGAGCGAATTTGTTCTGAGGTTTCAGTGGCTGCCAGCCTAATTGGTCGTTGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453356.1
CDS-3UTR CCA 90 bp GATCTAGATCAATGTGTGAGGATGTGGGTGCAGACACACACCCACACGACAATAAGGGGCGGTGGCCAGTaGCGGAGGCAGCAGCTGTGG +
Preference number: 4 (lower is better)
Translates to: DLDQCVRMWVQTHTHTTIRGGGQ*RRQQLW
Trigger: CCACAGCTGCTGCCTCCGCCACTGGCCACCGCCCCT...TATTGTCGTGTGGGTGTGTGTCTGCACCCACATCCTCACACATTGATCTAGATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000171887.8
ENST00000611415.4
CDS-3UTR CCA 90 bp CCCAGCTTGATTTCCCCTTGCAAAGCAGTTGAGTTAGGGAGACAGAGCTTTTCCGGCTGGAGGTGGGGCTaGACACTCGGGGTGACCCTG +
Preference number: 4 (lower is better)
Translates to: PSLISPCKAVELGRQSFSGWRWG*TLGVTL
Trigger: CAGGGTCACCCCGAGTGTCCAGCCCCACCTCCAGCC...GGAAAAGCTCTGTCTCCCTAACTCAACTGCTTTGCAAGGGGAAATCAAGCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp GACAGGAGCCCCAACATGAAGTTCTCAGTGCAAAGCTTTGGATTCTGGCTTGGCCTGATGGGCTGGAGGTaGGGCTGGACACTCGGGGTG +
Preference number: 4 (lower is better)
Translates to: DRSPNMKFSVQSFGFWLGLMGWR*GWTLGV
Trigger: CACCCCGAGTGTCCAGCCCCACCTCCAGCCCATCAG...GCCAAGCCAGAATCCAAAGCTTTGCACTGAGAACTTCATGTTGGGGCTCCTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310858.10
CDS-3UTR CCA 90 bp GCTATCGCTGAGACTCCACCAATTGGTTGGCCTACAGGCCTCACCTCCCGACTCCACAGCTGTCCTCCATaGTCCGGCTCACACTCATGT +
Preference number: 4 (lower is better)
Translates to: AIAETPPIGWPTGLTSRLHSCPP*SGSHSC
Trigger: ACATGAGTGTGAGCCGGACCATGGAGGACAGCTGTG...GAGTCGGGAGGTGAGGCCTGTAGGCCAACCAATTGGTGGAGTCTCAGCGATAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TCTCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGTCCAGGGCTGGGGTGTaGAGGTCGGGCCAGCCAAAT +
Preference number: 4 (lower is better)
Translates to: SLLRNWPKVLLLGSRVVRSRAGV*RSGQPN
Trigger: ATTTGGCTGGCCCGACCTCCACACCCCAGCCCTGGA...CCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TTCCTTCGCAGGTCCCCTCTCCATTGTTTTCTCGCCCAATCCTTCCCTCTTGCTTCCAGGGCTGGGGTGTaGAGGTCGGGCCAGCCAAAT +
Preference number: 4 (lower is better)
Translates to: FLRRSPLHCFLAQSFPLASRAGV*RSGQPN
Trigger: ATTTGGCTGGCCCGACCTCCACACCCCAGCCCTGGA...AGCAAGAGGGAAGGATTGGGCGAGAAAACAATGGAGAGGGGACCTGCGAAGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp CACATGCGCACACACGTCCTGTGTTACCACTGGCCAAGGAAACGCGAGTCTCAGAACCGGTCCAGAGCCTaGTCCGCACTGGCAGAAATG +
Preference number: 4 (lower is better)
Translates to: HMRTHVLCYHWPRKRESQNRSRA*SALAEM
Trigger: CATTTCTGCCAGTGCGGACCAGGCTCTGGACCGGTT...CTGAGACTCGCGTTTCCTTGGCCAGTGGTAACACAGGACGTGTGTGCGCATGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp CCCAACTGTCCAGTGGACCTTAGGCCCTTTGGCCCAAGTGCAAGCCTTCTGCCCATGCAGACGCTAGTCTaGCTGTCTCCTGGGATGTTG +
Preference number: 4 (lower is better)
Translates to: PNCPVDLRPFGPSASLLPMQTLV*LSPGML
Trigger: CAACATCCCAGGAGACAGCCAGACTAGCGTCTGCAT...GGGCAGAAGGCTTGCACTTGGGCCAAAGGGCCTAAGGTCCACTGGACAGTTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp GTAGAAGAGAAGGGTCTGGCGGCACCCAGGGTCACTAGAGTGCAGGTGCAGGCACTTCAAGAGCAGTCCTaGCTCGATGGTGATGCAGAC +
Preference number: 4 (lower is better)
Translates to: VEEKGLAAPRVTRVQVQALQEQS*LDGDAD
Trigger: GTCTGCATCACCATCGAGCCAGGACTGCTCTTGAAG...TGCCTGCACCTGCACTCTAGTGACCCTGGGTGCCGCCAGACCCTTCTCTTCTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp ATGTCCCACGGTGGCTCTGTTTGGTTTGACAACCTACCCCACAGGTGGCCAGAAAGCGTGTGTTCCACGTaGTTGGGGGTGGCCGACAGT +
Preference number: 4 (lower is better)
Translates to: MSHGGSVWFDNLPHRWPESVCST*LGVADS
Trigger: ACTGTCGGCCACCCCCAACCACGTGGAACACACGCT...TTCTGGCCACCTGTGGGGTAGGTTGTCAAACCAAACAGAGCCACCGTGGGACAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TGGTCAGGTGTTTTCCCAACTGTCCAGTGGACCTTAGGCCCTTTGGCCCAAGTGAGCGTGTGTTCCACGTaGTTGGGGGTGGCCGACAGT +
Preference number: 4 (lower is better)
Translates to: WSGVFPTVQWTLGPLAQVSVCST*LGVADS
Trigger: ACTGTCGGCCACCCCCAACCACGTGGAACACACGCT...CACTTGGGCCAAAGGGCCTAAGGTCCACTGGACAGTTGGGAAAACACCTGACCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp CACATGCGCACACACGTCCTGTGTTACCACTGGCCAAGGAAACGCGAGTCTCAGGCTGGGTGTGGTACATaGCGCCTTGCTTCTCTCGCT +
Preference number: 4 (lower is better)
Translates to: HMRTHVLCYHWPRKRESQAGCGT*RLASLA
Trigger: AGCGAGAGAAGCAAGGCGCCATGTACCACACCCAGC...CTGAGACTCGCGTTTCCTTGGCCAGTGGTAACACAGGACGTGTGTGCGCATGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp CGATGCCATTGCAGACCCTCCCACTCCTGCTGGGGTCTTTGTAGAAGAGAAGGGCTGAGGTGCTGGGTGTaGTACATGGCGCCTTGCTTC +
Preference number: 4 (lower is better)
Translates to: RCHCRPSHSCWGLCRREGLRCWV*YMAPCF
Trigger: GAAGCAAGGCGCCATGTACCACACCCAGCACCTCAG...CCCTTCTCTTCTACAAAGACCCCAGCAGGAGTGGGAGGGTCTGCAATGGCATCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp CCAGAACACCGTGATAGCAGGCTGATCAAACCGCTCACTTCCTCCCTGTTTTCCTGGGCTGGGACAACGTaGCGTCCAGAGGAGGGCACA +
Preference number: 4 (lower is better)
Translates to: PEHRDSRLIKPLTSSLFSWAGTT*RPEEGT
Trigger: TGTGCCCTCCTCTGGACGCCACGTTGTCCCAGCCCA...GGAAAACAGGGAGGAAGTGAGCGGTTTGATCAGCCTGCTATCACGGTGTTCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp GTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCATGGGTCCCCTCCCCACAAGACTTGTCCAGACCGTTaGTCAGTGGGGACAGGGCCT +
Preference number: 4 (lower is better)
Translates to: VLLLGSRVVRIHGSPPHKTCPDR*SVGTGP
Trigger: AGGCCCTGTCCCCACTGACCAACGGTCTGGACAAGT...CTTGTGGGGAGGGGACCCATGAATCCTGACCACTCTTGAACCCAGAAGGAGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp AGATCTAGATCAATGTGTGAGGATGTGGGTGCAGACACACACCCACACGACAATCAGGCCCCGCCCGGCTaGCAGACTCGTAGGGGTAGC +
Preference number: 4 (lower is better)
Translates to: RSRSMCEDVGADTHPHDNQAPPG*QTRRGS
Trigger: GCTACCCCTACGAGTCTGCCAGCCGGGCGGGGCCTG...ATTGTCGTGTGGGTGTGTGTCTGCACCCACATCCTCACACATTGATCTAGATCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp CCATTCTGGCTTAGAGTCCTTAAATGGTGGTCAGGTGTTTTCCCAACTGTCCAGCAGGCCCCGCCCGGCTaGCAGACTCGTAGGGGTAGC +
Preference number: 4 (lower is better)
Translates to: PFWLRVLKWWSGVFPTVQQAPPG*QTRRGS
Trigger: GCTACCCCTACGAGTCTGCCAGCCGGGCGGGGCCTG...CTGGACAGTTGGGAAAACACCTGACCACCATTTAAGGACTCTAAGCCAGAATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TTGATTTCCCCTTGCAAAGCAGTTGAGTTAGGGAGACAGAGCTTTTCCATTCCCCGCATGGGGGCCGTGTaGCCAGCATGGGCAGGCCCC +
Preference number: 4 (lower is better)
Translates to: LISPCKAVELGRQSFSIPRMGAV*PAWAGP
Trigger: GGGGCCTGCCCATGCTGGCCACACGGCCCCCATGCG...GGGAATGGAAAAGCTCTGTCTCCCTAACTCAACTGCTTTGCAAGGGGAAATCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TTGGGTTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTCTCCTCCATCGCATGGGGGCCGTGTaGCCAGCATGGGCAGGCCCC +
Preference number: 4 (lower is better)
Translates to: LGFCSFHLPRGIQVLLLHRMGAV*PAWAGP
Trigger: GGGGCCTGCCCATGCTGGCCACACGGCCCCCATGCG...ATGGAGGAGAAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAACCCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATAGTAGGAGGGCCGCATaGGGGCCGTGTGGCCAGCAT +
Preference number: 4 (lower is better)
Translates to: SPPKLAQSPPSGFKSGQDSRRAA*GPCGQH
Trigger: ATGCTGGCCACACGGCCCCCATGCGGCCCTCCTACT...ATCCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TGCAGGCACCAGGAGAGAGCCTCTGTCACCCATAGCTTGGTTGTTTGTCCCTCCAGCGGAACATACCGCTaGGGTCATGGGCATAGTGGG +
Preference number: 4 (lower is better)
Translates to: CRHQERASVTHSLVVCPSSGTYR*GHGHSG
Trigger: CCCACTATGCCCATGACCCCAGCGGTATGTTCCGCT...GGAGGGACAAACAACCAAGCTATGGGTGACAGAGGCTCTCTCCTGGTGCCTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp CACATGCGCACACACGTCCTGTGTTACCACTGGCCAAGGAAACGCGAGTCTCAGAGCGGAACATACCGCTaGGGTCATGGGCATAGTGGG +
Preference number: 4 (lower is better)
Translates to: HMRTHVLCYHWPRKRESQSGTYR*GHGHSG
Trigger: CCCACTATGCCCATGACCCCAGCGGTATGTTCCGCT...CTGAGACTCGCGTTTCCTTGGCCAGTGGTAACACAGGACGTGTGTGCGCATGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TCTCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGTCTTTCCTGCTGGCGTaGAGGTGGGCGAGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: SLLRNWPKVLLLGSRVVRSFLLA*RWARLL
Trigger: CAGCAGCCTCGCCCACCTCCACGCCAGCAGGAAAGA...CCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TGGTCAGGTGTTTTCCCAACTGTCCAGTGGACCTTAGGCCCTTTGGCCCAAGTGCAGGGAGACTGGGGATaGGGGTCTCTGCCAATGGCT +
Preference number: 4 (lower is better)
Translates to: WSGVFPTVQWTLGPLAQVQGDWG*GSLPMA
Trigger: AGCCATTGGCAGAGACCCCCATCCCCAGTCTCCCTG...CACTTGGGCCAAAGGGCCTAAGGTCCACTGGACAGTTGGGAAAACACCTGACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp CGATGCCATTGCAGACCCTCCCACTCCTGCTGGGGTCTTTGTAGAAGAGAAGGGTGTTCAATCTCCTGCTaGGAGGCTGCTCGCGGGAAC +
Preference number: 4 (lower is better)
Translates to: RCHCRPSHSCWGLCRREGCSISC*EAARGN
Trigger: GTTCCCGCGAGCAGCCTCCCAGCAGGAGATTGAACA...CCCTTCTCTTCTACAAAGACCCCAGCAGGAGTGGGAGGGTCTGCAATGGCATCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp CACATGCGCACACACGTCCTGTGTTACCACTGGCCAAGGAAACGCGAGTCTCAGTGTTCAATCTCCTGCTaGGAGGCTGCTCGCGGGAAC +
Preference number: 4 (lower is better)
Translates to: HMRTHVLCYHWPRKRESQCSISC*EAARGN
Trigger: GTTCCCGCGAGCAGCCTCCCAGCAGGAGATTGAACA...CTGAGACTCGCGTTTCCTTGGCCAGTGGTAACACAGGACGTGTGTGCGCATGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp CGCAGGGATGCTGGGAGGGAGTTACCAGCTTTCTGGCATGAATGGGTCCTCCCGCCAACGAATGCCCACTaGGGATATAGCCAGATCTGG +
Preference number: 4 (lower is better)
Translates to: RRDAGRELPAFWHEWVLPPTNAH*GYSQIW
Trigger: CCAGATCTGGCTATATCCCCAGTGGGCATTCGTTGG...CGGGAGGACCCATTCATGCCAGAAAGCTGGTAACTCCCTCCCAGCATCCCTGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp AATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCATGGGTCCGGCCCTGGAGGGCTGTaGGTGGTCGGAAGGAAGGCA +
Preference number: 4 (lower is better)
Translates to: NWPKVLLLGSRVVRIHGSGPGGL*VVGRKA
Trigger: TGCCTTCCTTCCGACCACCCACAGCCCTCCAGGGCC...GGACCCATGAATCCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATGGCCCTGGAGGGCTGTaGGTGGTCGGAAGGAAGGCA +
Preference number: 4 (lower is better)
Translates to: SPPKLAQSPPSGFKSGQDGPGGL*VVGRKA
Trigger: TGCCTTCCTTCCGACCACCCACAGCCCTCCAGGGCC...ATCCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TGCAGGCACCAGGAGAGAGCCTCTGTCACCCATAGCTTGGTTGTTTGTCCCTCCACCCCTGCTACCCTGTaGGCCACCAGCCCTTCTAAA +
Preference number: 4 (lower is better)
Translates to: CRHQERASVTHSLVVCPSTPATL*ATSPSK
Trigger: TTTAGAAGGGCTGGTGGCCCACAGGGTAGCAGGGGT...GGAGGGACAAACAACCAAGCTATGGGTGACAGAGGCTCTCTCCTGGTGCCTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TCTCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGCATACTGTCCATCACTaGCCGCCCGCCTCCGCAGAG +
Preference number: 4 (lower is better)
Translates to: SLLRNWPKVLLLGSRVVRHTVHH*PPASAE
Trigger: CTCTGCGGAGGCGGGCGGCCAGTGATGGACAGTATG...CCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp GAAATCTTTGGCAAGAATATACTGCAGTGCGGAGTGTTGTGTGTGCGTAGGTGTGGGACCGCACCCCACTaGGTGGTGGGCTGCTCGGGG +
Preference number: 4 (lower is better)
Translates to: EIFGKNILQCGVLCVRRCGTAPH*VVGCSG
Trigger: CCCCGAGCAGCCCACCACCCAGTGGGGTGCGGTCCC...ACACCTACGCACACACAACACTCCGCACTGCAGTATATTCTTGCCAAAGATTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TCTGCCCTCTGCTGCATGGGCAGCGTGGCTCAGCTAGGGAAACCAAGGCAGAAACAACAGGATGTCCGCTaGGTTGTGAGGTTTCAGGCC +
Preference number: 4 (lower is better)
Translates to: SALCCMGSVAQLGKPRQKQQDVR*VVRFQA
Trigger: GGCCTGAAACCTCACAACCCAGCGGACATCCTGTTG...TTTCTGCCTTGGTTTCCCTAGCTGAGCCACGCTGCCCATGCAGCAGAGGGCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp CTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCATGGCGTCCGGGGACCCTaGTCACTGCTCTCTCCCGAC +
Preference number: 4 (lower is better)
Translates to: LRNWPKVLLLGSRVVRIHGVRGP*SLLSPD
Trigger: GTCGGGAGAGAGCAGTGACCAGGGTCCCCGGACGCC...ATGAATCCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp CCCAGCTTGATTTCCCCTTGCAAAGCAGTTGAGTTAGGGAGACAGAGCTTTTCCGGCGTCCGGGGACCCTaGTCACTGCTCTCTCCCGAC +
Preference number: 4 (lower is better)
Translates to: PSLISPCKAVELGRQSFSGVRGP*SLLSPD
Trigger: GTCGGGAGAGAGCAGTGACCAGGGTCCCCGGACGCC...GGAAAAGCTCTGTCTCCCTAACTCAACTGCTTTGCAAGGGGAAATCAAGCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp CTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCATCCAACAGAGGCTGGGTaGGCGTCCGGGGACCCTGGT +
Preference number: 4 (lower is better)
Translates to: LRNWPKVLLLGSRVVRIHPTEAG*ASGDPG
Trigger: ACCAGGGTCCCCGGACGCCCACCCAGCCTCTGTTGG...ATGAATCCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp CTTCCCTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCCTCCCAGGCACCGTGTaGACGCCAGCCACACTGAAC +
Preference number: 4 (lower is better)
Translates to: LPSPHVALSSLLRNWPKVLPGTV*TPATLN
Trigger: GTTCAGTGTGGCTGGCGTCCACACGGTGCCTGGGAG...GACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGGGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp ATGCGCACACACGTCCTGTGTTACCACTGGCCAAGGAAACGCGAGTCTCAGGATGTCGCTGCACTGCTCTaGGGGCTGGAGACAGTGCTA +
Preference number: 4 (lower is better)
Translates to: MRTHVLCYHWPRKRESQDVAALL*GLETVL
Trigger: TAGCACTGTCTCCAGCCCCCAGAGCAGTGCAGCGAC...ATCCTGAGACTCGCGTTTCCTTGGCCAGTGGTAACACAGGACGTGTGTGCGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp CCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGGACTCCCCGGGGTGGTaGCCACTTTGTTGTGGAGGC +
Preference number: 4 (lower is better)
Translates to: PRCTFFSPPKLAQSPPSGDSPGW*PLCCGG
Trigger: GCCTCCACAACAAAGTGGCCACCACCCCGGGGAGTC...CCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp ATGTCCCACGGTGGCTCTGTTTGGTTTGACAACCTACCCCACAGGTGGCCAGAATGGGACTCCCCGGGGTaGTGGCCACTTTGTTGTGGA +
Preference number: 4 (lower is better)
Translates to: MSHGGSVWFDNLPHRWPEWDSPG*WPLCCG
Trigger: TCCACAACAAAGTGGCCACCACCCCGGGGAGTCCCA...TTCTGGCCACCTGTGGGGTAGGTTGTCAAACCAAACAGAGCCACCGTGGGACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp AAGAGAAGGGTCTGGCGGCACCCAGGGTCACTAGAGTGCAGGTGCAGGCACCAGTGGGGCTTCCAGGGCTaGCTATTGCATTGCTATGAA +
Preference number: 4 (lower is better)
Translates to: KRRVWRHPGSLECRCRHQWGFQG*LLHCYE
Trigger: TTCATAGCAATGCAATAGCCAGCCCTGGAAGCCCCA...CTGGTGCCTGCACCTGCACTCTAGTGACCCTGGGTGCCGCCAGACCCTTCTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCTGCCGGGACAGTGTaGGTCTCCGATCCTCCGGGG +
Preference number: 4 (lower is better)
Translates to: SPPKLAQSPPSGFKSGQDSAGTV*VSDPPG
Trigger: CCCCGGAGGATCGGAGACCCACACTGTCCCGGCAGA...ATCCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp CCCAACTGTCCAGTGGACCTTAGGCCCTTTGGCCCAAGTGCAAGCCTTCTGCCCCTCCGGGCTGTTGTCTaGCATGGAGTACTTGGAGAA +
Preference number: 4 (lower is better)
Translates to: PNCPVDLRPFGPSASLLPLRAVV*HGVLGE
Trigger: TTCTCCAAGTACTCCATGCCAGACAACAGCCCGGAG...GGGCAGAAGGCTTGCACTTGGGCCAAAGGGCCTAAGGTCCACTGGACAGTTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp GTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCATGGGTCCCCTCCCCACAAGCGATGGCCTGCTCCCTaGAGATCTCAGGCTTGTACC +
Preference number: 4 (lower is better)
Translates to: VLLLGSRVVRIHGSPPHKRWPAP*RSQACT
Trigger: GGTACAAGCCTGAGATCTCCAGGGAGCAGGCCATCG...CTTGTGGGGAGGGGACCCATGAATCCTGACCACTCTTGAACCCAGAAGGAGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp AATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCATGGGTCCAAGGCCCCCGGCTCCTaGTCCTTGAGGAGCGCGATG +
Preference number: 4 (lower is better)
Translates to: NWPKVLLLGSRVVRIHGSKAPGS*SLRSAM
Trigger: CATCGCGCTCCTCAAGGACCAGGAGCCGGGGGCCTT...GGACCCATGAATCCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp GCTATCGCTGAGACTCCACCAATTGGTTGGCCTACAGGCCTCACCTCCCGACTCGGTCTGCAGTTGAGTTaGCAGGGCCGGAGCTATCTT +
Preference number: 4 (lower is better)
Translates to: AIAETPPIGWPTGLTSRLGLQLS*QGRSYL
Trigger: AAGATAGCTCCGGCCCTGCCAACTCAACTGCAGACC...GAGTCGGGAGGTGAGGCCTGTAGGCCAACCAATTGGTGGAGTCTCAGCGATAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp CTTCCCTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCTGGTGGCAGCTGGCGTaGGGTCTGCAGCCAACGTCT +
Preference number: 4 (lower is better)
Translates to: LPSPHVALSSLLRNWPKVWWQLA*GLQPTS
Trigger: AGACGTTGGCTGCAGACCCCACGCCAGCTGCCACCA...GACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGGGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp ATGTCCCACGGTGGCTCTGTTTGGTTTGACAACCTACCCCACAGGTGGCCAGAAAACGATGGTGGCAGCTaGCGTGGGGTCTGCAGCCAA +
Preference number: 4 (lower is better)
Translates to: MSHGGSVWFDNLPHRWPENDGGS*RGVCSQ
Trigger: TTGGCTGCAGACCCCACGCCAGCTGCCACCATCGTT...TTCTGGCCACCTGTGGGGTAGGTTGTCAAACCAAACAGAGCCACCGTGGGACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp GGGCGATGCCATTGCAGACCCTCCCACTCCTGCTGGGGTCTTTGTAGAAGAGAACAGAGGCCGGCTGGTTaGGGTCAAGCTCAGCAAAGA +
Preference number: 4 (lower is better)
Translates to: GRCHCRPSHSCWGLCRREQRPAG*GQAQQR
Trigger: TCTTTGCTGAGCTTGACCCCAACCAGCCGGCCTCTG...TTCTCTTCTACAAAGACCCCAGCAGGAGTGGGAGGGTCTGCAATGGCATCGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TGGTCAGGTGTTTTCCCAACTGTCCAGTGGACCTTAGGCCCTTTGGCCCAAGTGATGGCAGAGGCCGGCTaGTTGGGGTCAAGCTCAGCA +
Preference number: 4 (lower is better)
Translates to: WSGVFPTVQWTLGPLAQVMAEAG*LGSSSA
Trigger: TGCTGAGCTTGACCCCAACCAGCCGGCCTCTGCCAT...CACTTGGGCCAAAGGGCCTAAGGTCCACTGGACAGTTGGGAAAACACCTGACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TCTCCTGGCCAGTCTCAGAAGACCCAGGGATCCTCAAAAACCAGGGGAGAAGGAATGGCAGAGGCCGGCTaGTTGGGGTCAAGCTCAGCA +
Preference number: 4 (lower is better)
Translates to: SPGQSQKTQGSSKTRGEGMAEAG*LGSSSA
Trigger: TGCTGAGCTTGACCCCAACCAGCCGGCCTCTGCCAT...TCCTTCTCCCCTGGTTTTTGAGGATCCCTGGGTCTTCTGAGACTGGCCAGGAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TCTCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGCCATGGCACTGGCCCTaGGCAAGGGGCAGGGTTCAT +
Preference number: 4 (lower is better)
Translates to: SLLRNWPKVLLLGSRVVRPWHWP*ARGRVH
Trigger: ATGAACCCTGCCCCTTGCCCAGGGCCAGTGCCATGG...CCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp CGATGCCATTGCAGACCCTCCCACTCCTGCTGGGGTCTTTGTAGAAGAGAAGGGAGTGGTCAGGATTCATaGGTCCCCTCCCCACAAGCC +
Preference number: 4 (lower is better)
Translates to: RCHCRPSHSCWGLCRREGSGQDS*VPSPQA
Trigger: GGCTTGTGGGGAGGGGACCCATGAATCCTGACCACT...CCCTTCTCTTCTACAAAGACCCCAGCAGGAGTGGGAGGGTCTGCAATGGCATCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp GTGAGGAAGGGAAAAGCGACCGTGAAAGCTGACCCCAGACTCAGTCCTGGGCCCGGAGGGGGTGTTAGGTaGACCTGGTTAGTTTTGGAG +
Preference number: 4 (lower is better)
Translates to: VRKGKATVKADPRLSPGPGGGVR*TWLVLE
Trigger: CTCCAAAACTAACCAGGTCCACCTAACACCCCCTCC...GGGCCCAGGACTGAGTCTGGGGTCAGCTTTCACGGTCGCTTTTCCCTTCCTCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp CCCAACTGTCCAGTGGACCTTAGGCCCTTTGGCCCAAGTGCAAGCCTTCTGCCCGGAGGGGGTGTTAGGTaGACCTGGTTAGTTTTGGAG +
Preference number: 4 (lower is better)
Translates to: PNCPVDLRPFGPSASLLPGGGVR*TWLVLE
Trigger: CTCCAAAACTAACCAGGTCCACCTAACACCCCCTCC...GGGCAGAAGGCTTGCACTTGGGCCAAAGGGCCTAAGGTCCACTGGACAGTTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp CCTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCCTCCCTGAGCCACATGCCTTaGGGAAGACACCCCGAGCTC +
Preference number: 4 (lower is better)
Translates to: PLPTLHFLLSSEIGPKSSLSHMP*GRHPEL
Trigger: GAGCTCGGGGTGTCTTCCCCAAGGCATGTGGCTCAG...GGAGGACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp ATGCGCACACACGTCCTGTGTTACCACTGGCCAAGGAAACGCGAGTCTCAGGATCTGAGCCACATGCCTTaGGGAAGACACCCCGAGCTC +
Preference number: 4 (lower is better)
Translates to: MRTHVLCYHWPRKRESQDLSHMP*GRHPEL
Trigger: GAGCTCGGGGTGTCTTCCCCAAGGCATGTGGCTCAG...ATCCTGAGACTCGCGTTTCCTTGGCCAGTGGTAACACAGGACGTGTGTGCGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp GTGTGCATGGGTGCACAGCCCGCCGTGACACAGAAGGGCTCTGGTGCAGGGCCCCTTAGAGTCCTTAAATaGTGGTCAGGTGTTTTCCCA +
Preference number: 4 (lower is better)
Translates to: VCMGAQPAVTQKGSGAGPLRVLK*WSGVFP
Trigger: TGGGAAAACACCTGACCACCATTTAAGGACTCTAAG...GGGCCCTGCACCAGAGCCCTTCTGTGTCACGGCGGGCTGTGCACCCATGCACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TCTCCTGGCCAGTCTCAGAAGACCCAGGGATCCTCAAAAACCAGGGGAGAAGGAAAGGGGGCCAAAGGCTaGGACATGTGCAACCCCTCC +
Preference number: 4 (lower is better)
Translates to: SPGQSQKTQGSSKTRGEGKGAKG*DMCNPS
Trigger: GGAGGGGTTGCACATGTCCCAGCCTTTGGCCCCCTT...TCCTTCTCCCCTGGTTTTTGAGGATCCCTGGGTCTTCTGAGACTGGCCAGGAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp ATGTCCCACGGTGGCTCTGTTTGGTTTGACAACCTACCCCACAGGTGGCCAGAACTGGGAGCTGACTGCTaGGCCCCTGGCTTGCTGAAA +
Preference number: 4 (lower is better)
Translates to: MSHGGSVWFDNLPHRWPELGADC*APGLLK
Trigger: TTTCAGCAAGCCAGGGGCCCAGCAGTCAGCTCCCAG...TTCTGGCCACCTGTGGGGTAGGTTGTCAAACCAAACAGAGCCACCGTGGGACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp ATGTCCAGGATAAGGAGCATACACCAGGATTTATACACGGTGGCAGCGGCTATAGCAGGGGGTGGCCAGTaGGGCCTCTGCCCCTGCTCT +
Preference number: 4 (lower is better)
Translates to: MSRIRSIHQDLYTVAAAIAGGGQ*GLCPCS
Trigger: AGAGCAGGGGCAGAGGCCCCACTGGCCACCCCCTGC...TATAGCCGCTGCCACCGTGTATAAATCCTGGTGTATGCTCCTTATCCTGGACAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TCTGCAATTCACTTCCCTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATTGCAGGGGGTGGCCAGTaGGGCCTCTGCCCCTGCTCT +
Preference number: 4 (lower is better)
Translates to: SAIHFPLPTLHFLLSSEIAGGGQ*GLCPCS
Trigger: AGAGCAGGGGCAGAGGCCCCACTGGCCACCCCCTGC...AATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGGGAAGTGAATTGCAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp CACATGCGCACACACGTCCTGTGTTACCACTGGCCAAGGAAACGCGAGTCTCAGCACAAGGTTTCACTCTaGGAAGCAGGGGGTGGCCAG +
Preference number: 4 (lower is better)
Translates to: HMRTHVLCYHWPRKRESQHKVSL*EAGGGQ
Trigger: CTGGCCACCCCCTGCTTCCCAGAGTGAAACCTTGTG...CTGAGACTCGCGTTTCCTTGGCCAGTGGTAACACAGGACGTGTGTGCGCATGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TGCAGGCACCAGGAGAGAGCCTCTGTCACCCATAGCTTGGTTGTTTGTCCCTCCCCAGGAATAGGCTCCTaGGCTCTCCAGTGGGAGATG +
Preference number: 4 (lower is better)
Translates to: CRHQERASVTHSLVVCPSPGIGS*ALQWEM
Trigger: CATCTCCCACTGGAGAGCCCAGGAGCCTATTCCTGG...GGAGGGACAAACAACCAAGCTATGGGTGACAGAGGCTCTCTCCTGGTGCCTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp CCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGCTGGAGTGGAGGGGCTaGCCATGCATGCAAGGTGGG +
Preference number: 4 (lower is better)
Translates to: PRCTFFSPPKLAQSPPSGLEWRG*PCMQGG
Trigger: CCCACCTTGCATGCATGGCCAGCCCCTCCACTCCAG...CCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp AATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCATGGGTCCCCGCAGGGGCACACATaGCTCAGGCTGGAGTGGAGG +
Preference number: 4 (lower is better)
Translates to: NWPKVLLLGSRVVRIHGSPQGHT*LRLEWR
Trigger: CCTCCACTCCAGCCTGAGCCATGTGTGCCCCTGCGG...GGACCCATGAATCCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp GGGGAAGACACCCCGAGCTCAACAGCTGCCTGTTCTGACAGATCTCTTCCTATGTGGGAAAAAGCCACGTaGAGCTCACTGGGCCCCTCC +
Preference number: 4 (lower is better)
Translates to: GEDTPSSTAACSDRSLPMWEKAT*SSLGPS
Trigger: GGAGGGGCCCAGTGAGCTCCACGTGGCTTTTTCCCA...CATAGGAAGAGATCTGTCAGAACAGGCAGCTGTTGAGCTCGGGGTGTCTTCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TCTTCTCCCAGACCCTTTCCCATCCCAGCCCATGTTCAAGGCCAGACAGCGCTCCCCTCTTGCTCCCTTTaGGAAAAAGCCACGTGGAGC +
Preference number: 4 (lower is better)
Translates to: SSPRPFPIPAHVQGQTALPSCSL*EKATWS
Trigger: GCTCCACGTGGCTTTTTCCCAAAGGGAGCAAGAGGG...GAGCGCTGTCTGGCCTTGAACATGGGCTGGGATGGGAAAGGGTCTGGGAGAAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp AAGAGAAGGGTCTGGCGGCACCCAGGGTCACTAGAGTGCAGGTGCAGGCACCAGAGGAATCCTGGCCATTaGTGTCCACAGCTTTCAGAG +
Preference number: 4 (lower is better)
Translates to: KRRVWRHPGSLECRCRHQRNPGH*CPQLSE
Trigger: CTCTGAAAGCTGTGGACACCAATGGCCAGGATTCCT...CTGGTGCCTGCACCTGCACTCTAGTGACCCTGGGTGCCGCCAGACCCTTCTCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp CCCAACTGTCCAGTGGACCTTAGGCCCTTTGGCCCAAGTGCAAGCCTTCTGCCCAGGAGGCAGGGGTGGTaGACAAAAGTAGGAGTGAGA +
Preference number: 4 (lower is better)
Translates to: PNCPVDLRPFGPSASLLPRRQGW*TKVGVR
Trigger: TCTCACTCCTACTTTTGTCCACCACCCCTGCCTCCT...GGGCAGAAGGCTTGCACTTGGGCCAAAGGGCCTAAGGTCCACTGGACAGTTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp GCTATCGCTGAGACTCCACCAATTGGTTGGCCTACAGGCCTCACCTCCCGACTCTCCAGGAGGCAGGGGTaGTGGACAAAAGTAGGAGTG +
Preference number: 4 (lower is better)
Translates to: AIAETPPIGWPTGLTSRLSRRQG*WTKVGV
Trigger: CACTCCTACTTTTGTCCACCACCCCTGCCTCCTGGA...GAGTCGGGAGGTGAGGCCTGTAGGCCAACCAATTGGTGGAGTCTCAGCGATAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TTCCTTCGCAGGTCCCCTCTCCATTGTTTTCTCGCCCAATCCTTCCCTCTTGCTTCCAGGGCCTGGACCTaGGGTAAAGGGCTGCTCTGG +
Preference number: 4 (lower is better)
Translates to: FLRRSPLHCFLAQSFPLASRAWT*GKGLLW
Trigger: CCAGAGCAGCCCTTTACCCCAGGTCCAGGCCCTGGA...AGCAAGAGGGAAGGATTGGGCGAGAAAACAATGGAGAGGGGACCTGCGAAGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp GCTATCGCTGAGACTCCACCAATTGGTTGGCCTACAGGCCTCACCTCCCGACTCGCAAGAGCCCAGGCGTaGGATATGAACAGAGGTCCT +
Preference number: 4 (lower is better)
Translates to: AIAETPPIGWPTGLTSRLARAQA*DMNRGP
Trigger: AGGACCTCTGTTCATATCCCACGCCTGGGCTCTTGC...GAGTCGGGAGGTGAGGCCTGTAGGCCAACCAATTGGTGGAGTCTCAGCGATAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TGGTCAGGTGTTTTCCCAACTGTCCAGTGGACCTTAGGCCCTTTGGCCCAAGTGAGGGGGCAGCCACCTTaGCCTGGCATTTCCGATGAC +
Preference number: 4 (lower is better)
Translates to: WSGVFPTVQWTLGPLAQVRGQPP*PGISDD
Trigger: GTCATCGGAAATGCCAGGCCAAGGTGGCTGCCCCCT...CACTTGGGCCAAAGGGCCTAAGGTCCACTGGACAGTTGGGAAAACACCTGACCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp CCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTCCGGGGCTCTCCTGTaGGGTGCAACAGGATGTCCG +
Preference number: 4 (lower is better)
Translates to: PRCTFFSPPKLAQSPPSGSGALL*GATGCP
Trigger: CGGACATCCTGTTGCACCCCACAGGAGAGCCCCGGA...CCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430930.5
ENST00000446688.5
ENST00000646520.1
CDS-3UTR TCA 90 bp CTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCATGCTGGACACTCGGGGTaGCCCTGGTGGAGCCGTTGT +
Preference number: 4 (lower is better)
Translates to: LRNWPKVLLLGSRVVRIHAGHSG*PWWSRC
Trigger: ACAACGGCTCCACCAGGGTCACCCCGAGTGTCCAGC...ATGAATCCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp GTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCATGGGTCCCCTCCCCACAAGTCACACTCATGTTTCTaGTGGGCTGGAGGTGGGGCT +
Preference number: 4 (lower is better)
Translates to: VLLLGSRVVRIHGSPPHKSHSCF*WAGGGA
Trigger: AGCCCCACCTCCAGCCCATCAGAAACATGAGTGTGA...CTTGTGGGGAGGGGACCCATGAATCCTGACCACTCTTGAACCCAGAAGGAGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp TGCAGGCACCAGGAGAGAGCCTCTGTCACCCATAGCTTGGTTGTTTGTCCCTCCCTCCATGTTTGGACTTaGGCATCTGCGCCACCTCAC +
Preference number: 4 (lower is better)
Translates to: CRHQERASVTHSLVVCPSLHVWT*ASAPPH
Trigger: GTGAGGTGGCGCAGATGCTCAAGTCCAAACATGGAG...GGAGGGACAAACAACCAAGCTATGGGTGACAGAGGCTCTCTCCTGGTGCCTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp CGATGCCATTGCAGACCCTCCCACTCCTGCTGGGGTCTTTGTAGAAGAGAAGGGGCATGTAAGCCGCGATaGCAACTCCTATCCTGCCTC +
Preference number: 4 (lower is better)
Translates to: RCHCRPSHSCWGLCRREGACKPR*QLLSCL
Trigger: GAGGCAGGATAGGAGTTGTCATCGCGGCTTACATGC...CCCTTCTCTTCTACAAAGACCCCAGCAGGAGTGGGAGGGTCTGCAATGGCATCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp GTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCATGGGTCCCCTCCCCACAAGCGGAGAGCAGGCCACTaGAGTAATGCACGTACCTTC +
Preference number: 4 (lower is better)
Translates to: VLLLGSRVVRIHGSPPHKRRAGH*SNARTF
Trigger: GAAGGTACGTGCATTACTTCAGTGGCCTGCTCTCCG...CTTGTGGGGAGGGGACCCATGAATCCTGACCACTCTTGAACCCAGAAGGAGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp GTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCATGGGTCCCCTCCCCACAAGTGGGGATGCCGTGCATaGTCACGTGGTGCAGAAACA +
Preference number: 4 (lower is better)
Translates to: VLLLGSRVVRIHGSPPHKWGCRA*SRGAET
Trigger: TGTTTCTGCACCACGTGATCATGCACGGCATCCCCA...CTTGTGGGGAGGGGACCCATGAATCCTGACCACTCTTGAACCCAGAAGGAGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp CTTCCCTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCACTGCACACGGAAGATaGCGTCTCGGGCTGGGCTTC +
Preference number: 4 (lower is better)
Translates to: LPSPHVALSSLLRNWPKVTAHGR*RLGLGF
Trigger: GAAGCCCAGCCCGAGACGTCATCTTCCGTGTGCAGT...GACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp CACATGCGCACACACGTCCTGTGTTACCACTGGCCAAGGAAACGCGAGTCTCAGATGCTGCCCGCACTGTaGCCATCCTGGTTTGGCAAT +
Preference number: 4 (lower is better)
Translates to: HMRTHVLCYHWPRKRESQMLPAL*PSWFGN
Trigger: ATTGCCAAACCAGGATGGTCACAGTGCGGGCAGCAT...CTGAGACTCGCGTTTCCTTGGCCAGTGGTAACACAGGACGTGTGTGCGCATGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp GTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCATGGGTCCCCTCCCCACAAGATGCTGCCCGCACTGTaGCCATCCTGGTTTGGCAAT +
Preference number: 4 (lower is better)
Translates to: VLLLGSRVVRIHGSPPHKMLPAL*PSWFGN
Trigger: ATTGCCAAACCAGGATGGTCACAGTGCGGGCAGCAT...CTTGTGGGGAGGGGACCCATGAATCCTGACCACTCTTGAACCCAGAAGGAGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp CGATGCCATTGCAGACCCTCCCACTCCTGCTGGGGTCTTTGTAGAAGAGAAGGGATGCTGCCCGCACTGTaGCCATCCTGGTTTGGCAAT +
Preference number: 4 (lower is better)
Translates to: RCHCRPSHSCWGLCRREGMLPAL*PSWFGN
Trigger: ATTGCCAAACCAGGATGGTCACAGTGCGGGCAGCAT...CCCTTCTCTTCTACAAAGACCCCAGCAGGAGTGGGAGGGTCTGCAATGGCATCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp ATGTCCCACGGTGGCTCTGTTTGGTTTGACAACCTACCCCACAGGTGGCCAGAACCTCACTGGTGTTGGTaGCCCCGTCCAGAGAAGAGA +
Preference number: 4 (lower is better)
Translates to: MSHGGSVWFDNLPHRWPEPHWCW*PRPEKR
Trigger: TCTCTTCTCTGGACGGGGTCACCAACACCAGTGAGG...TTCTGGCCACCTGTGGGGTAGGTTGTCAAACCAAACAGAGCCACCGTGGGACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp ACCCTCCTTTCCAACTCCCTGAAACAGAACGTCCACACTGACACAGCTCCTTGGCCAGCCACACTGAACTaGGCTCGAGCCTGGCTTTCC +
Preference number: 4 (lower is better)
Translates to: TLLSNSLKQNVHTDTAPWPATLN*ARAWLS
Trigger: GGAAAGCCAGGCTCGAGCTCAGTTCAGTGTGGCTGG...CCAAGGAGCTGTGTCAGTGTGGACGTTCTGTTTCAGGGAGTTGGAAAGGAGGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp TTGATTTCCCCTTGCAAAGCAGTTGAGTTAGGGAGACAGAGCTTTTCCATTCCCGTTCTGTGGCGCGCCTaGGGGCTCCCAGGCACCGTG +
Preference number: 4 (lower is better)
Translates to: LISPCKAVELGRQSFSIPVLWRA*GLPGTV
Trigger: CACGGTGCCTGGGAGCCCTCAGGCGCGCCACAGAAC...GGGAATGGAAAAGCTCTGTCTCCCTAACTCAACTGCTTTGCAAGGGGAAATCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp TTGGGTTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTCTCCTCCATGTTCTGTGGCGCGCCTaGGGGCTCCCAGGCACCGTG +
Preference number: 4 (lower is better)
Translates to: LGFCSFHLPRGIQVLLLHVLWRA*GLPGTV
Trigger: CACGGTGCCTGGGAGCCCTCAGGCGCGCCACAGAAC...ATGGAGGAGAAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAACCCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp GTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCATGGGTCCCCTCCCCACAAGGGACCCATCATCTGGTaGTGGCTCAAACTGGGACTG +
Preference number: 4 (lower is better)
Translates to: VLLLGSRVVRIHGSPPHKGPIIW*WLKLGL
Trigger: CAGTCCCAGTTTGAGCCATCACCAGATGATGGGTCC...CTTGTGGGGAGGGGACCCATGAATCCTGACCACTCTTGAACCCAGAAGGAGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp TTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTCTCCTCCATCTTTCGCCAGGTTGCCTTGGTaGGCCCCAGGGTGCCGGCCC +
Preference number: 4 (lower is better)
Translates to: FLQFPSTQGNPSSSPPSFARLPW*APGCRP
Trigger: GGGCCGGCACCCTGGGGCTCACCAAGGCAACCTGGC...GAAAGATGGAGGAGAAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp TTGATTTCCCCTTGCAAAGCAGTTGAGTTAGGGAGACAGAGCTTTTCCATTCCCGGCTGCGGAGTCTGGTaGCGGGGAGGTGGCAGGGCT +
Preference number: 4 (lower is better)
Translates to: LISPCKAVELGRQSFSIPGCGVW*RGGGRA
Trigger: AGCCCTGCCACCTCCCCGTCACCAGACTCCGCAGCC...GGGAATGGAAAAGCTCTGTCTCCCTAACTCAACTGCTTTGCAAGGGGAAATCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp CTTCCCTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCTGCCCGGTCTCCCACTaGCATCCTTCGCTTCTCTGG +
Preference number: 4 (lower is better)
Translates to: LPSPHVALSSLLRNWPKVCPVSH*HPSLLW
Trigger: CCAGAGAAGCGAAGGATGTCAGTGGGAGACCGGGCA...GACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp ATTGGTTGGCCTACAGGCCTCACCTCCCGACTCCCCTCACTGCTGGGCGACATTAAGACACCTTCCCATTaGTGGTGGCATAGTTGGGGA +
Preference number: 4 (lower is better)
Translates to: IGWPTGLTSRLPSLLGDIKTPSH*WWHSWG
Trigger: TCCCCAACTATGCCACCATCAATGGGAAGGTGTCTT...AATGTCGCCCAGCAGTGAGGGGAGTCGGGAGGTGAGGCCTGTAGGCCAACCAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp CCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGGCGCCTCGGAAGGAGTaGCTGTCGCGGATGATGAAG +
Preference number: 4 (lower is better)
Translates to: PRCTFFSPPKLAQSPPSGAPRKE*LSRMMK
Trigger: CTTCATCATCCGCGACAGTCACTCCTTCCGAGGCGC...CCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp CCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTGGCCTGTGGCCCAGTaGGTGACTCCATGTCCACAG +
Preference number: 4 (lower is better)
Translates to: PRCTFFSPPKLAQSPPSGWPVAQ*VTPCPQ
Trigger: CTGTGGACATGGAGTCACTCACTGGGCCACAGGCCA...CCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp CGATGCCATTGCAGACCCTCCCACTCCTGCTGGGGTCTTTGTAGAAGAGAAGGGGCTGGTCCAGGGGCATaGAACCCAATAACAAGGCTG +
Preference number: 4 (lower is better)
Translates to: RCHCRPSHSCWGLCRREGAGPGA*NPITRL
Trigger: CAGCCTTGTTATTGGGTTTCATGCCCCTGGACCAGC...CCCTTCTCTTCTACAAAGACCCCAGCAGGAGTGGGAGGGTCTGCAATGGCATCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp CCAGAACACCGTGATAGCAGGCTGATCAAACCGCTCACTTCCTCCCTGTTTTCCGGGCCCCTGGCTTGCTaGAAAGTAAGGGGGCCAAAG +
Preference number: 4 (lower is better)
Translates to: PEHRDSRLIKPLTSSLFSGPLAC*KVRGPK
Trigger: CTTTGGCCCCCTTACTTTTCAGCAAGCCAGGGGCCC...GGAAAACAGGGAGGAAGTGAGCGGTTTGATCAGCCTGCTATCACGGTGTTCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp CTTCCCTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCAGCGACCGTGAAAGCTaGCCCCAGACTCAGTCCTGG +
Preference number: 4 (lower is better)
Translates to: LPSPHVALSSLLRNWPKVSDRES*PQTQSW
Trigger: CCAGGACTGAGTCTGGGGTCAGCTTTCACGGTCGCT...GACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp CGATGCCATTGCAGACCCTCCCACTCCTGCTGGGGTCTTTGTAGAAGAGAAGGGAGGGAAAAGCGACCGTaGAAGCTGACCCCAGACTCA +
Preference number: 4 (lower is better)
Translates to: RCHCRPSHSCWGLCRREGREKRP*KLTPDS
Trigger: TGAGTCTGGGGTCAGCTTTCACGGTCGCTTTTCCCT...CCCTTCTCTTCTACAAAGACCCCAGCAGGAGTGGGAGGGTCTGCAATGGCATCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp GCAATTCACTTCCCTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCGGCTGTGGTGGGTGGTaGGGAAGGGAAAAGCGACCG +
Preference number: 4 (lower is better)
Translates to: AIHFPLPTLHFLLSSEIGGCGGW*GREKRP
Trigger: CGGTCGCTTTTCCCTTCCTCACCACCCACCACAGCC...GCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGGGAAGTGAATTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp CTTCCCTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCACCAGCTTTCTGGCATaGATGGGTCCTCCCGCAGGG +
Preference number: 4 (lower is better)
Translates to: LPSPHVALSSLLRNWPKVTSFLA*MGPPAG
Trigger: CCCTGCGGGAGGACCCATTCATGCCAGAAAGCTGGT...GACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp GGGCGATGCCATTGCAGACCCTCCCACTCCTGCTGGGGTCTTTGTAGAAGAGAACACACTCTCAGAAACTaGCTCCTTCCGCAGGGATGC +
Preference number: 4 (lower is better)
Translates to: GRCHCRPSHSCWGLCRREHTLRN*LLPQGC
Trigger: GCATCCCTGCGGAAGGAGTCAGTTTCTGAGAGTGTG...TTCTCTTCTACAAAGACCCCAGCAGGAGTGGGAGGGTCTGCAATGGCATCGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp GTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCATGGGTCCCCTCCCCACAAGCACACTCTCAGAAACTaGCTCCTTCCGCAGGGATGC +
Preference number: 4 (lower is better)
Translates to: VLLLGSRVVRIHGSPPHKHTLRN*LLPQGC
Trigger: GCATCCCTGCGGAAGGAGTCAGTTTCTGAGAGTGTG...CTTGTGGGGAGGGGACCCATGAATCCTGACCACTCTTGAACCCAGAAGGAGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp TTCCTTCGCAGGTCCCCTCTCCATTGTTTTCTCGCCCAATCCTTCCCTCTTGCTCCAGCTGAAGGGACATaGCCCTCCTCTGCCCTCTTC +
Preference number: 4 (lower is better)
Translates to: FLRRSPLHCFLAQSFPLAPAEGT*PSSALF
Trigger: GAAGAGGGCAGAGGAGGGTCATGTCCCTTCAGCTGG...AGCAAGAGGGAAGGATTGGGCGAGAAAACAATGGAGAGGGGACCTGCGAAGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp CGATGCCATTGCAGACCCTCCCACTCCTGCTGGGGTCTTTGTAGAAGAGAAGGGATTGGGTGTCTGCCTTaGCTCACAGGATCTCCCCAG +
Preference number: 4 (lower is better)
Translates to: RCHCRPSHSCWGLCRREGIGCLP*LTGSPQ
Trigger: CTGGGGAGATCCTGTGAGTCAAGGCAGACACCCAAT...CCCTTCTCTTCTACAAAGACCCCAGCAGGAGTGGGAGGGTCTGCAATGGCATCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp GTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCATGGGTCCCCTCCCCACAAGCACCTGGGCTATCGCTaGGACTCCACCAATTGGTTG +
Preference number: 4 (lower is better)
Translates to: VLLLGSRVVRIHGSPPHKHLGYR*DSTNWL
Trigger: CAACCAATTGGTGGAGTCTCAGCGATAGCCCAGGTG...CTTGTGGGGAGGGGACCCATGAATCCTGACCACTCTTGAACCCAGAAGGAGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp GGGCGATGCCATTGCAGACCCTCCCACTCCTGCTGGGGTCTTTGTAGAAGAGAACCCAGGCGTGGGATATaGACAGAGGTCCTCCAACAT +
Preference number: 4 (lower is better)
Translates to: GRCHCRPSHSCWGLCRREPRRGI*TEVLQH
Trigger: ATGTTGGAGGACCTCTGTTCATATCCCACGCCTGGG...TTCTCTTCTACAAAGACCCCAGCAGGAGTGGGAGGGTCTGCAATGGCATCGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp ACAGGGCGATGCCATTGCAGACCCTCCCACTCCTGCTGGGGTCTTTGTAGAAGACCCAGGCGTGGGATATaGACAGAGGTCCTCCAACAT +
Preference number: 4 (lower is better)
Translates to: TGRCHCRPSHSCWGLCRRPRRGI*TEVLQH
Trigger: ATGTTGGAGGACCTCTGTTCATATCCCACGCCTGGG...TCTTCTACAAAGACCCCAGCAGGAGTGGGAGGGTCTGCAATGGCATCGCCCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp TGCAGGCACCAGGAGAGAGCCTCTGTCACCCATAGCTTGGTTGTTTGTCCCTCCTCTCCTCATTGGCTGTaGTGGGGAAGGAGACAGCGA +
Preference number: 4 (lower is better)
Translates to: CRHQERASVTHSLVVCPSSPHWL*WGRRQR
Trigger: TCGCTGTCTCCTTCCCCAGCACAGCCAATGAGGAGA...GGAGGGACAAACAACCAAGCTATGGGTGACAGAGGCTCTCTCCTGGTGCCTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp GTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCATGGGTCCCCTCCCCACAAGTCTCCTCATTGGCTGTaGTGGGGAAGGAGACAGCGA +
Preference number: 4 (lower is better)
Translates to: VLLLGSRVVRIHGSPPHKSPHWL*WGRRQR
Trigger: TCGCTGTCTCCTTCCCCAGCACAGCCAATGAGGAGA...CTTGTGGGGAGGGGACCCATGAATCCTGACCACTCTTGAACCCAGAAGGAGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp GTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCATGGGTCCCCTCCCCACAAGTTGGACTTGAGCATCTaGGCCACCTCACGGAGGTTG +
Preference number: 4 (lower is better)
Translates to: VLLLGSRVVRIHGSPPHKLDLSI*ATSRRL
Trigger: CAACCTCCGTGAGGTGGCGCAGATGCTCAAGTCCAA...CTTGTGGGGAGGGGACCCATGAATCCTGACCACTCTTGAACCCAGAAGGAGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp ACAGGGCGATGCCATTGCAGACCCTCCCACTCCTGCTGGGGTCTTTGTAGAAGAGCATGGCCTGGTAGATaGGGAGAAATGGCCGACATC +
Preference number: 4 (lower is better)
Translates to: TGRCHCRPSHSCWGLCRRAWPGR*GEMADI
Trigger: GATGTCGGCCATTTCTCCGCATCTACCAGGCCATGC...TCTTCTACAAAGACCCCAGCAGGAGTGGGAGGGTCTGCAATGGCATCGCCCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp CGCAGGGATGCTGGGAGGGAGTTACCAGCTTTCTGGCATGAATGGGTCCTCCCGTCTCCAGGTGCTCCATaGCTTGAATTTTCTCTGGCC +
Preference number: 4 (lower is better)
Translates to: RRDAGRELPAFWHEWVLPSPGAP*LEFSLA
Trigger: GGCCAGAGAAAATTCAAGGCATGGAGCACCTGGAGA...CGGGAGGACCCATTCATGCCAGAAAGCTGGTAACTCCCTCCCAGCATCCCTGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp CCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGGCCCCGGTGCTGCCGTaGAGGGAGTCTTTCTTCTTC +
Preference number: 4 (lower is better)
Translates to: PRCTFFSPPKLAQSPPSGAPVLP*RESFFF
Trigger: GAAGAAGAAAGACTCCCTGCACGGCAGCACCGGGGC...CCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp ACCCTCCTTTCCAACTCCCTGAAACAGAACGTCCACACTGACACAGCTCCTTGGTGGAGGCTGTGGAGTTaGCCGAGTCGCTGCTCACAG +
Preference number: 4 (lower is better)
Translates to: TLLSNSLKQNVHTDTAPWWRLWS*PSRCSQ
Trigger: CTGTGAGCAGCGACTCGGGCAACTCCACAGCCTCCA...CCAAGGAGCTGTGTCAGTGTGGACGTTCTGTTTCAGGGAGTTGGAAAGGAGGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp CTTCCCTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCTGGAGGCTGTGGAGTTaGCCGAGTCGCTGCTCACAG +
Preference number: 4 (lower is better)
Translates to: LPSPHVALSSLLRNWPKVWRLWS*PSRCSQ
Trigger: CTGTGAGCAGCGACTCGGGCAACTCCACAGCCTCCA...GACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp TTGATTTCCCCTTGCAAAGCAGTTGAGTTAGGGAGACAGAGCTTTTCCATTCCCCACAGCCGAGCCCCCTaGTGGGCGGGACCTGAGGTG +
Preference number: 4 (lower is better)
Translates to: LISPCKAVELGRQSFSIPHSRAP*WAGPEV
Trigger: CACCTCAGGTCCCGCCCAGCAGGGGGCTCGGCTGTG...GGGAATGGAAAAGCTCTGTCTCCCTAACTCAACTGCTTTGCAAGGGGAAATCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp CCTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCCTCCAGAGTGTGCCCATGCTaGCCGCACTGTGACCATCCT +
Preference number: 4 (lower is better)
Translates to: PLPTLHFLLSSEIGPKSSRVCPC*PHCDHP
Trigger: AGGATGGTCACAGTGCGGGCAGCATGGGCACACTCT...GGAGGACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp ATGCGCACACACGTCCTGTGTTACCACTGGCCAAGGAAACGCGAGTCTCAGGATAGAGTGTGCCCATGCTaGCCGCACTGTGACCATCCT +
Preference number: 4 (lower is better)
Translates to: MRTHVLCYHWPRKRESQDRVCPC*PHCDHP
Trigger: AGGATGGTCACAGTGCGGGCAGCATGGGCACACTCT...ATCCTGAGACTCGCGTTTCCTTGGCCAGTGGTAACACAGGACGTGTGTGCGCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp GTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCATGGGTCCCCTCCCCACAAGAAGAGAGTGTGCCCATaGTGCCCGCACTGTGACCAT +
Preference number: 4 (lower is better)
Translates to: VLLLGSRVVRIHGSPPHKKRVCP*CPHCDH
Trigger: ATGGTCACAGTGCGGGCAGCATGGGCACACTCTCTT...CTTGTGGGGAGGGGACCCATGAATCCTGACCACTCTTGAACCCAGAAGGAGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp CGATGCCATTGCAGACCCTCCCACTCCTGCTGGGGTCTTTGTAGAAGAGAAGGGAAGAGAGTGTGCCCATaGTGCCCGCACTGTGACCAT +
Preference number: 4 (lower is better)
Translates to: RCHCRPSHSCWGLCRREGKRVCP*CPHCDH
Trigger: ATGGTCACAGTGCGGGCAGCATGGGCACACTCTCTT...CCCTTCTCTTCTACAAAGACCCCAGCAGGAGTGGGAGGGTCTGCAATGGCATCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp ACAGGGCGATGCCATTGCAGACCCTCCCACTCCTGCTGGGGTCTTTGTAGAAGAAAGAGAGTGTGCCCATaGTGCCCGCACTGTGACCAT +
Preference number: 4 (lower is better)
Translates to: TGRCHCRPSHSCWGLCRRKRVCP*CPHCDH
Trigger: ATGGTCACAGTGCGGGCAGCATGGGCACACTCTCTT...TCTTCTACAAAGACCCCAGCAGGAGTGGGAGGGTCTGCAATGGCATCGCCCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp TTGGAGGCTTTGGGTTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTGCACAGCCTCCCGGCTaGTTCCCCCTCGGACCGGAG +
Preference number: 4 (lower is better)
Translates to: LEALGFCSFHLPRGIQVLAQPPG*FPLGPE
Trigger: CTCCGGTCCGAGGGGGAAGCAGCCGGGAGGCTGTGC...AAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAACCCAAAGCCTCCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp TTGATTTCCCCTTGCAAAGCAGTTGAGTTAGGGAGACAGAGCTTTTCCATTCCCGCACAGCCTCCCGGCTaGTTCCCCCTCGGACCGGAG +
Preference number: 4 (lower is better)
Translates to: LISPCKAVELGRQSFSIPAQPPG*FPLGPE
Trigger: CTCCGGTCCGAGGGGGAAGCAGCCGGGAGGCTGTGC...GGGAATGGAAAAGCTCTGTCTCCCTAACTCAACTGCTTTGCAAGGGGAAATCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp GTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCATGGGTCCCCTCCCCACAAGGAATTCAGTCCCCTTTaGACAGCCTCCCGGCTGCTT +
Preference number: 4 (lower is better)
Translates to: VLLLGSRVVRIHGSPPHKEFSPL*TASRLL
Trigger: AAGCAGCCGGGAGGCTGTGCAAAGGGGACTGAATTC...CTTGTGGGGAGGGGACCCATGAATCCTGACCACTCTTGAACCCAGAAGGAGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp CTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCATGGGGATGGGGGTCTCTaGCAATGGCTGAGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: LRNWPKVLLLGSRVVRIHGDGGL*QWLRAG
Trigger: CCCAGCCCTCAGCCATTGGCAGAGACCCCCATCCCC...ATGAATCCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp CTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCATCACTGGGTGGTGGGCTaGTCGGGGAGGTTCCCTCCA +
Preference number: 4 (lower is better)
Translates to: LRNWPKVLLLGSRVVRIHHWVVG*SGRFPP
Trigger: TGGAGGGAACCTCCCCGAGCAGCCCACCACCCAGTG...ATGAATCCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp GCAATTCACTTCCCTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCGGGGACCCTGGTCACTaGTCTCTCCCGACGGGAAAC +
Preference number: 4 (lower is better)
Translates to: AIHFPLPTLHFLLSSEIGGDPGH*SLPTGN
Trigger: GTTTCCCGTCGGGAGAGAGCAGTGACCAGGGTCCCC...GCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGGGAAGTGAATTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp CCTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCCTCCGTGAGTAGTCGGGGCTaGTGTAGCTACTGCCCACAG +
Preference number: 4 (lower is better)
Translates to: PLPTLHFLLSSEIGPKSSVSSRG*CSYCPQ
Trigger: CTGTGGGCAGTAGCTACAGCAGCCCCGACTACTCAC...GGAGGACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp TCTCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGGGGGGCTGGAGACAGTaGTACCATGGAAGCCAGTGC +
Preference number: 4 (lower is better)
Translates to: SLLRNWPKVLLLGSRVVRGGWRQ*YHGSQC
Trigger: GCACTGGCTTCCATGGTAGCACTGTCTCCAGCCCCC...CCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGAGA
57% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp CCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGGGGGGCTGGAGACAGTaGTACCATGGAAGCCAGTGC +
Preference number: 4 (lower is better)
Translates to: PRCTFFSPPKLAQSPPSGGGWRQ*YHGSQC
Trigger: GCACTGGCTTCCATGGTAGCACTGTCTCCAGCCCCC...CCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGG
57% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp CTTCCCTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCAACCTGGTAGACCCCTaGTGGGTGCCGACACAGGCT +
Preference number: 4 (lower is better)
Translates to: LPSPHVALSSLLRNWPKVNLVDP*WVPTQA
Trigger: AGCCTGTGTCGGCACCCAGCAGGGGTCTACCAGGTT...GACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp CCAGAACACCGTGATAGCAGGCTGATCAAACCGCTCACTTCCTCCCTGTTTTCCAACCTGGTAGACCCCTaGTGGGTGCCGACACAGGCT +
Preference number: 4 (lower is better)
Translates to: PEHRDSRLIKPLTSSLFSNLVDP*WVPTQA
Trigger: AGCCTGTGTCGGCACCCAGCAGGGGTCTACCAGGTT...GGAAAACAGGGAGGAAGTGAGCGGTTTGATCAGCCTGCTATCACGGTGTTCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp CTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCATGACCGGAGGCCAGGTTaGCTTGGTGAGCCCCAGGGT +
Preference number: 4 (lower is better)
Translates to: LRNWPKVLLLGSRVVRIHDRRPG*LGEPQG
Trigger: ACCCTGGGGCTCACCAAGGCAACCTGGCCTCCGGTC...ATGAATCCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp AATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCATGGGTCCGGTAGCCAGAGGCACTaGTCTGCCGGGACAGTGTGG +
Preference number: 4 (lower is better)
Translates to: NWPKVLLLGSRVVRIHGSGSQRH*SAGTVW
Trigger: CCACACTGTCCCGGCAGAGCAGTGCCTCTGGCTACC...GGACCCATGAATCCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp GCAATTCACTTCCCTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCGGTGTTGGGCTCCCTTaGCGGAAGGCTGCGGAGTCT +
Preference number: 4 (lower is better)
Translates to: AIHFPLPTLHFLLSSEIGGVGLP*RKAAES
Trigger: AGACTCCGCAGCCTTCCGGCAAGGGAGCCCAACACC...GCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGGGAAGTGAATTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp CGATGCCATTGCAGACCCTCCCACTCCTGCTGGGGTCTTTGTAGAAGAGAAGGGTTTCCCCCTCCCCTCTaGAATTCACTTCCCTCTCCC +
Preference number: 4 (lower is better)
Translates to: RCHCRPSHSCWGLCRREGFPPPL*NSLPSP
Trigger: GGGAGAGGGAAGTGAATTGCAGAGGGGAGGGGGAAA...CCCTTCTCTTCTACAAAGACCCCAGCAGGAGTGGGAGGGTCTGCAATGGCATCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp GGGCGATGCCATTGCAGACCCTCCCACTCCTGCTGGGGTCTTTGTAGAAGAGAATTTCCCCCTCCCCTCTaGAATTCACTTCCCTCTCCC +
Preference number: 4 (lower is better)
Translates to: GRCHCRPSHSCWGLCRREFPPPL*NSLPSP
Trigger: GGGAGAGGGAAGTGAATTGCAGAGGGGAGGGGGAAA...TTCTCTTCTACAAAGACCCCAGCAGGAGTGGGAGGGTCTGCAATGGCATCGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp GAGAAGGGTCTGGCGGCACCCAGGGTCACTAGAGTGCAGGTGCAGGCACCAGGAAGCTTGATTTCCCCTTaGAAAGCAGTTGAGTTAGGG +
Preference number: 4 (lower is better)
Translates to: EKGLAAPRVTRVQVQAPGSLISP*KAVELG
Trigger: CCCTAACTCAACTGCTTTGCAAGGGGAAATCAAGCT...TCCTGGTGCCTGCACCTGCACTCTAGTGACCCTGGGTGCCGCCAGACCCTTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp ATGTCCCACGGTGGCTCTGTTTGGTTTGACAACCTACCCCACAGGTGGCCAGAATGTTTGTCCCTCCCCTaGTGCACTGCCACCACCAAC +
Preference number: 4 (lower is better)
Translates to: MSHGGSVWFDNLPHRWPECLSLP*CTATTN
Trigger: GTTGGTGGTGGCAGTGCAGCAGGGGAGGGACAAACA...TTCTGGCCACCTGTGGGGTAGGTTGTCAAACCAAACAGAGCCACCGTGGGACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp TCTCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGCCAGGGTCACTAGAGTaGAGGTGCAGGCACCAGGAG +
Preference number: 4 (lower is better)
Translates to: SLLRNWPKVLLLGSRVVRPGSLE*RCRHQE
Trigger: CTCCTGGTGCCTGCACCTGCACTCTAGTGACCCTGG...CCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp GCAATTCACTTCCCTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCGGCAGGACAGGGCGATaGCATTGCAGACCCTCCCAC +
Preference number: 4 (lower is better)
Translates to: AIHFPLPTLHFLLSSEIGGRTGR*HCRPSH
Trigger: GTGGGAGGGTCTGCAATGGCATCGCCCTGTCCTGCC...GCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGGGAAGTGAATTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp GCAATTCACTTCCCTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCCCTTCTGCCCTCTGCTaGATGGGCAGCGTGGCTCAG +
Preference number: 4 (lower is better)
Translates to: AIHFPLPTLHFLLSSEIGPSALC*MGSVAQ
Trigger: CTGAGCCACGCTGCCCATGCAGCAGAGGGCAGAAGG...GCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGGGAAGTGAATTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp CTTCCCTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCAAGCCTTCTGCCCTCTaGTGCATGGGCAGCGTGGCT +
Preference number: 4 (lower is better)
Translates to: LPSPHVALSSLLRNWPKVKPSAL*CMGSVA
Trigger: AGCCACGCTGCCCATGCAGCAGAGGGCAGAAGGCTT...GACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp GTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCATGGGTCCCCTCCCCACAAGCAAGGAGACCCTGGCTaGTTCAAGAACAAAGGCCCC +
Preference number: 4 (lower is better)
Translates to: VLLLGSRVVRIHGSPPHKQGDPG*FKNKGP
Trigger: GGGGCCTTTGTTCTTGAAGCAGCCAGGGTCTCCTTG...CTTGTGGGGAGGGGACCCATGAATCCTGACCACTCTTGAACCCAGAAGGAGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp CGATGCCATTGCAGACCCTCCCACTCCTGCTGGGGTCTTTGTAGAAGAGAAGGGCAAGGAGACCCTGGCTaGTTCAAGAACAAAGGCCCC +
Preference number: 4 (lower is better)
Translates to: RCHCRPSHSCWGLCRREGQGDPG*FKNKGP
Trigger: GGGGCCTTTGTTCTTGAAGCAGCCAGGGTCTCCTTG...CCCTTCTCTTCTACAAAGACCCCAGCAGGAGTGGGAGGGTCTGCAATGGCATCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp CCAGAACACCGTGATAGCAGGCTGATCAAACCGCTCACTTCCTCCCTGTTTTCCACCCATGTCCCCGCATaGTCACACACTCGCTCAGGC +
Preference number: 4 (lower is better)
Translates to: PEHRDSRLIKPLTSSLFSTHVPA*SHTRSG
Trigger: GCCTGAGCGAGTGTGTGAGCATGCGGGGACATGGGT...GGAAAACAGGGAGGAAGTGAGCGGTTTGATCAGCCTGCTATCACGGTGTTCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp TCTCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGCTCCTTCCGCAGGGATaGTGGGAGGGAGTTACCAGC +
Preference number: 4 (lower is better)
Translates to: SLLRNWPKVLLLGSRVVRLLPQG*WEGVTS
Trigger: GCTGGTAACTCCCTCCCAGCATCCCTGCGGAAGGAG...CCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp GAGAAGGGTCTGGCGGCACCCAGGGTCACTAGAGTGCAGGTGCAGGCACCAGGATTGGCAAGAATATACTaGAGTGCGGAGTGTTGTGTG +
Preference number: 4 (lower is better)
Translates to: EKGLAAPRVTRVQVQAPGLARIY*SAECCV
Trigger: CACACAACACTCCGCACTGCAGTATATTCTTGCCAA...TCCTGGTGCCTGCACCTGCACTCTAGTGACCCTGGGTGCCGCCAGACCCTTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp ACCCTCCTTTCCAACTCCCTGAAACAGAACGTCCACACTGACACAGCTCCTTGGGAACCTGCTGGGGTCTaGGTCGCTGCGATGTCCATG +
Preference number: 4 (lower is better)
Translates to: TLLSNSLKQNVHTDTAPWEPAGV*VAAMSM
Trigger: CATGGACATCGCAGCGACGCAGACCCCAGCAGGTTC...CCAAGGAGCTGTGTCAGTGTGGACGTTCTGTTTCAGGGAGTTGGAAAGGAGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp ATGTCCCACGGTGGCTCTGTTTGGTTTGACAACCTACCCCACAGGTGGCCAGAACTCCCCTGGAGCCCCTaGACAGGCTCATCAGAACAA +
Preference number: 4 (lower is better)
Translates to: MSHGGSVWFDNLPHRWPELPWSP*TGSSEQ
Trigger: TTGTTCTGATGAGCCTGTGCAGGGGCTCCAGGGGAG...TTCTGGCCACCTGTGGGGTAGGTTGTCAAACCAAACAGAGCCACCGTGGGACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp CCCAACTGTCCAGTGGACCTTAGGCCCTTTGGCCCAAGTGCAAGCCTTCTGCCCATCCACACTTGCACATaGGCACACACGTCCTGTGTT +
Preference number: 4 (lower is better)
Translates to: PNCPVDLRPFGPSASLLPIHTCT*AHTSCV
Trigger: AACACAGGACGTGTGTGCGCATGTGCAAGTGTGGAT...GGGCAGAAGGCTTGCACTTGGGCCAAAGGGCCTAAGGTCCACTGGACAGTTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp GTAGAAGAGAAGGGTCTGGCGGCACCCAGGGTCACTAGAGTGCAGGTGCAGGCAAATTTGAAGTTCCATTaGCCAGCACCTCCAACCCCG +
Preference number: 4 (lower is better)
Translates to: VEEKGLAAPRVTRVQVQANLKFH*PAPPTP
Trigger: CGGGGTTGGAGGTGCTGGGCAATGGAACTTCAAATT...TGCCTGCACCTGCACTCTAGTGACCCTGGGTGCCGCCAGACCCTTCTCTTCTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp GTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCATGGGTCCCCTCCCCACAAGCCCGACTCCCCTCACTaGTGGGCGACATTGAATTTG +
Preference number: 4 (lower is better)
Translates to: VLLLGSRVVRIHGSPPHKPDSPH*WATLNL
Trigger: CAAATTCAATGTCGCCCAGCAGTGAGGGGAGTCGGG...CTTGTGGGGAGGGGACCCATGAATCCTGACCACTCTTGAACCCAGAAGGAGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp ATTAGGCTGGCAGCCACTGAAACCTCAGAACAAATTCGCTCCAGCCTCTGCTTTGCTGGGCCCCCTCCATaGCGTCATCTCGATGCCCAC +
Preference number: 4 (lower is better)
Translates to: IRLAATETSEQIRSSLCFAGPPP*RHLDAH
Trigger: GTGGGCATCGAGATGACGGCATGGAGGGGGCCCAGC...AAAGCAGAGGCTGGAGCGAATTTGTTCTGAGGTTTCAGTGGCTGCCAGCCTAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000453356.1
CDS-3UTR CCA 90 bp CCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGGCACCAGCTCATGGTTaGATGGAGGAACGCAGGGGG +
Preference number: 4 (lower is better)
Translates to: PRCTFFSPPKLAQSPPSGAPAHG*MEERRG
Trigger: CCCCCTGCGTTCCTCCATCCAACCATGAGCTGGTGC...CCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp ACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGCTGGAGGTGGGGCTaGACACTCGGGGTGACCCTG +
Preference number: 4 (lower is better)
Translates to: TFFSPPKLAQSPPSGFKSGWRWG*TLGVTL
Trigger: CAGGGTCACCCCGAGTGTCCAGCCCCACCTCCAGCC...ACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp GTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCATGGGTCCCCTCCCCACAAGCACAGCTGTCCTCCATaGTCCGGCTCACACTCATGT +
Preference number: 4 (lower is better)
Translates to: VLLLGSRVVRIHGSPPHKHSCPP*SGSHSC
Trigger: ACATGAGTGTGAGCCGGACCATGGAGGACAGCTGTG...CTTGTGGGGAGGGGACCCATGAATCCTGACCACTCTTGAACCCAGAAGGAGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp GTGAGGAAGGGAAAAGCGACCGTGAAAGCTGACCCCAGACTCAGTCCTGGGCCCTCCAGTACCTTGGCATaGAGCTTCGTGATGTCAGGT +
Preference number: 4 (lower is better)
Translates to: VRKGKATVKADPRLSPGPSSTLA*SFVMSG
Trigger: ACCTGACATCACGAAGCTCCATGCCAAGGTACTGGA...GGGCCCAGGACTGAGTCTGGGGTCAGCTTTCACGGTCGCTTTTCCCTTCCTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp CACAGGGCAGAGTCCAGGAGCCAGAACACTTCCTTGGCTTGGAAAAGGAAAAAGTCCAGGGCTGGGGTGTaGAGGTCGGGCCAGCCAAAT +
Preference number: 4 (lower is better)
Translates to: HRAESRSQNTSLAWKRKKSRAGV*RSGQPN
Trigger: ATTTGGCTGGCCCGACCTCCACACCCCAGCCCTGGA...CTTTTTCCTTTTCCAAGCCAAGGAAGTGTTCTGGCTCCTGGACTCTGCCCTGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000310858.10
CDS-3UTR CCA 90 bp GTGAGGAAGGGAAAAGCGACCGTGAAAGCTGACCCCAGACTCAGTCCTGGGCCCGGGATGGCTGGCCAATaGGCACAATCTTATCCTCAT +
Preference number: 4 (lower is better)
Translates to: VRKGKATVKADPRLSPGPGMAGQ*AQSYPH
Trigger: ATGAGGATAAGATTGTGCCCATTGGCCAGCCATCCC...GGGCCCAGGACTGAGTCTGGGGTCAGCTTTCACGGTCGCTTTTCCCTTCCTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp AAGAGAAGGGTCTGGCGGCACCCAGGGTCACTAGAGTGCAGGTGCAGGCACCAGCTTCTTTGGGATGGCTaGCCAATGGGCACAATCTTA +
Preference number: 4 (lower is better)
Translates to: KRRVWRHPGSLECRCRHQLLWDG*PMGTIL
Trigger: TAAGATTGTGCCCATTGGCCAGCCATCCCAAAGAAG...CTGGTGCCTGCACCTGCACTCTAGTGACCCTGGGTGCCGCCAGACCCTTCTCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp GTAGAAGAGAAGGGTCTGGCGGCACCCAGGGTCACTAGAGTGCAGGTGCAGGCAGTACCTTCTTTGGGATaGCTGGCCAATGGGCACAAT +
Preference number: 4 (lower is better)
Translates to: VEEKGLAAPRVTRVQVQAVPSLG*LANGHN
Trigger: ATTGTGCCCATTGGCCAGCCATCCCAAAGAAGGTAC...TGCCTGCACCTGCACTCTAGTGACCCTGGGTGCCGCCAGACCCTTCTCTTCTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp GGGCGATGCCATTGCAGACCCTCCCACTCCTGCTGGGGTCTTTGTAGAAGAGAATGCACGTACCTTCTTTaGGATGGCTGGCCAATGGGC +
Preference number: 4 (lower is better)
Translates to: GRCHCRPSHSCWGLCRRECTYLL*DGWPMG
Trigger: GCCCATTGGCCAGCCATCCCAAAGAAGGTACGTGCA...TTCTCTTCTACAAAGACCCCAGCAGGAGTGGGAGGGTCTGCAATGGCATCGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp CGCAGGGATGCTGGGAGGGAGTTACCAGCTTTCTGGCATGAATGGGTCCTCCCGTGTACACAGGTTGCATaGCCTGGTAGATGCGGAGAA +
Preference number: 4 (lower is better)
Translates to: RRDAGRELPAFWHEWVLPCTQVA*PGRCGE
Trigger: TTCTCCGCATCTACCAGGCCATGCAACCTGTGTACA...CGGGAGGACCCATTCATGCCAGAAAGCTGGTAACTCCCTCCCAGCATCCCTGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp GCAGACCCTCCCACTCCTGCTGGGGTCTTTGTAGAAGAGAAGGGTCTGGCGGCAAGTCTGGCTGTCTCCTaGGATGTTGTAGATGCCAGA +
Preference number: 4 (lower is better)
Translates to: ADPPTPAGVFVEEKGLAASLAVS*DVVDAR
Trigger: TCTGGCATCTACAACATCCCAGGAGACAGCCAGACT...TGCCGCCAGACCCTTCTCTTCTACAAAGACCCCAGCAGGAGTGGGAGGGTCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp GCTATCGCTGAGACTCCACCAATTGGTTGGCCTACAGGCCTCACCTCCCGACTCATGCAGACGCTAGTCTaGCTGTCTCCTGGGATGTTG +
Preference number: 4 (lower is better)
Translates to: AIAETPPIGWPTGLTSRLMQTLV*LSPGML
Trigger: CAACATCCCAGGAGACAGCCAGACTAGCGTCTGCAT...GAGTCGGGAGGTGAGGCCTGTAGGCCAACCAATTGGTGGAGTCTCAGCGATAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp ATGTCCCACGGTGGCTCTGTTTGGTTTGACAACCTACCCCACAGGTGGCCAGAATCTTGTCGGTCTTGGTaGAGGCTGTGGAGTTGCCCG +
Preference number: 4 (lower is better)
Translates to: MSHGGSVWFDNLPHRWPESCRSW*RLWSCP
Trigger: CGGGCAACTCCACAGCCTCCACCAAGACCGACAAGA...TTCTGGCCACCTGTGGGGTAGGTTGTCAAACCAAACAGAGCCACCGTGGGACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp CCTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCCTCCCGGTCTTGTCGGTCTTaGTGGAGGCTGTGGAGTTGC +
Preference number: 4 (lower is better)
Translates to: PLPTLHFLLSSEIGPKSSRSCRS*WRLWSC
Trigger: GCAACTCCACAGCCTCCACCAAGACCGACAAGACCG...GGAGGACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TCTCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGAGCTCCCGCTTCTCCTaGGGACTCAAGGCAGCAGTG +
Preference number: 4 (lower is better)
Translates to: SLLRNWPKVLLLGSRVVRSSRFS*GLKAAV
Trigger: CACTGCTGCCTTGAGTCCCCAGGAGAAGCGGGAGCT...CCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp ACCCTCCTTTCCAACTCCCTGAAACAGAACGTCCACACTGACACAGCTCCTTGGAGCTCCCGCTTCTCCTaGGGACTCAAGGCAGCAGTG +
Preference number: 4 (lower is better)
Translates to: TLLSNSLKQNVHTDTAPWSSRFS*GLKAAV
Trigger: CACTGCTGCCTTGAGTCCCCAGGAGAAGCGGGAGCT...CCAAGGAGCTGTGTCAGTGTGGACGTTCTGTTTCAGGGAGTTGGAAAGGAGGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp ATGTCCCACGGTGGCTCTGTTTGGTTTGACAACCTACCCCACAGGTGGCCAGAAGCTGGGTGTGGTACATaGCGCCTTGCTTCTCTCGCT +
Preference number: 4 (lower is better)
Translates to: MSHGGSVWFDNLPHRWPEAGCGT*RLASLA
Trigger: AGCGAGAGAAGCAAGGCGCCATGTACCACACCCAGC...TTCTGGCCACCTGTGGGGTAGGTTGTCAAACCAAACAGAGCCACCGTGGGACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp GGGGAAGACACCCCGAGCTCAACAGCTGCCTGTTCTGACAGATCTCTTCCTATGGCTGGGTGTGGTACATaGCGCCTTGCTTCTCTCGCT +
Preference number: 4 (lower is better)
Translates to: GEDTPSSTAACSDRSLPMAGCGT*RLASLA
Trigger: AGCGAGAGAAGCAAGGCGCCATGTACCACACCCAGC...CATAGGAAGAGATCTGTCAGAACAGGCAGCTGTTGAGCTCGGGGTGTCTTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TTGGGTTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTCTCCTCCATAGCCGAGCCCCCTGCTaGGCGGGACCTGAGGTGCTG +
Preference number: 4 (lower is better)
Translates to: LGFCSFHLPRGIQVLLLHSRAPC*AGPEVL
Trigger: CAGCACCTCAGGTCCCGCCCAGCAGGGGGCTCGGCT...ATGGAGGAGAAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAACCCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp CCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGCAGACCGTTGGTCAGTaGGGACAGGGCCTCTGGGTA +
Preference number: 4 (lower is better)
Translates to: PRCTFFSPPKLAQSPPSGQTVGQ*GQGLWV
Trigger: TACCCAGAGGCCCTGTCCCCACTGACCAACGGTCTG...CCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp CTTCCCTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCCAGACCGTTGGTCAGTaGGGACAGGGCCTCTGGGTA +
Preference number: 4 (lower is better)
Translates to: LPSPHVALSSLLRNWPKVQTVGQ*GQGLWV
Trigger: TACCCAGAGGCCCTGTCCCCACTGACCAACGGTCTG...GACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp CCCAGCTTGATTTCCCCTTGCAAAGCAGTTGAGTTAGGGAGACAGAGCTTTTCCAGTAGGAGGGCCGCATaGGGGCCGTGTGGCCAGCAT +
Preference number: 4 (lower is better)
Translates to: PSLISPCKAVELGRQSFSSRRAA*GPCGQH
Trigger: ATGCTGGCCACACGGCCCCCATGCGGCCCTCCTACT...GGAAAAGCTCTGTCTCCCTAACTCAACTGCTTTGCAAGGGGAAATCAAGCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp AATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCATGGGTCCGGGCATAGTGGGAGGTaGTCACTGGCTGTGGCCAGG +
Preference number: 4 (lower is better)
Translates to: NWPKVLLLGSRVVRIHGSGHSGR*SLAVAR
Trigger: CCTGGCCACAGCCAGTGACCACCTCCCACTATGCCC...GGACCCATGAATCCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp ATGTCCCACGGTGGCTCTGTTTGGTTTGACAACCTACCCCACAGGTGGCCAGAAAGCGGAACATACCGCTaGGGTCATGGGCATAGTGGG +
Preference number: 4 (lower is better)
Translates to: MSHGGSVWFDNLPHRWPESGTYR*GHGHSG
Trigger: CCCACTATGCCCATGACCCCAGCGGTATGTTCCGCT...TTCTGGCCACCTGTGGGGTAGGTTGTCAAACCAAACAGAGCCACCGTGGGACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp GAAATCTTTGGCAAGAATATACTGCAGTGCGGAGTGTTGTGTGTGCGTAGGTGTCCCTCGGACCGGAGCTaGGGGCAGCTGGGGTTCAGC +
Preference number: 4 (lower is better)
Translates to: EIFGKNILQCGVLCVRRCPSDRS*GQLGFS
Trigger: GCTGAACCCCAGCTGCCCCCAGCTCCGGTCCGAGGG...ACACCTACGCACACACAACACTCCGCACTGCAGTATATTCTTGCCAAAGATTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TTGATTTCCCCTTGCAAAGCAGTTGAGTTAGGGAGACAGAGCTTTTCCATTCCCCCCTCGGACCGGAGCTaGGGGCAGCTGGGGTTCAGC +
Preference number: 4 (lower is better)
Translates to: LISPCKAVELGRQSFSIPPSDRS*GQLGFS
Trigger: GCTGAACCCCAGCTGCCCCCAGCTCCGGTCCGAGGG...GGGAATGGAAAAGCTCTGTCTCCCTAACTCAACTGCTTTGCAAGGGGAAATCAA
57% GC, longest homopolymer 6 nt, total homopolymer stretches 22 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp GCAATTCACTTCCCTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCTCTTTCCTGCTGGCGTaGAGGTGGGCGAGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: AIHFPLPTLHFLLSSEIGSFLLA*RWARLL
Trigger: CAGCAGCCTCGCCCACCTCCACGCCAGCAGGAAAGA...GCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGGGAAGTGAATTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp CCCAGCTTGATTTCCCCTTGCAAAGCAGTTGAGTTAGGGAGACAGAGCTTTTCCTGGGCTCTTTCCTGCTaGCGTGGAGGTGGGCGAGGC +
Preference number: 4 (lower is better)
Translates to: PSLISPCKAVELGRQSFSWALSC*RGGGRG
Trigger: GCCTCGCCCACCTCCACGCCAGCAGGAAAGAGCCCA...GGAAAAGCTCTGTCTCCCTAACTCAACTGCTTTGCAAGGGGAAATCAAGCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp CTTCCCTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCGGAACTCAGGGAGACTaGGGATGGGGGTCTCTGCCA +
Preference number: 4 (lower is better)
Translates to: LPSPHVALSSLLRNWPKVGTQGD*GWGSLP
Trigger: TGGCAGAGACCCCCATCCCCAGTCTCCCTGAGTTCC...GACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGGGAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp ATGTCCCACGGTGGCTCTGTTTGGTTTGACAACCTACCCCACAGGTGGCCAGAAACCCCTGCTACCCTGTaGGCCACCAGCCCTTCTAAA +
Preference number: 4 (lower is better)
Translates to: MSHGGSVWFDNLPHRWPETPATL*ATSPSK
Trigger: TTTAGAAGGGCTGGTGGCCCACAGGGTAGCAGGGGT...TTCTGGCCACCTGTGGGGTAGGTTGTCAAACCAAACAGAGCCACCGTGGGACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATCATACTGTCCATCACTaGCCGCCCGCCTCCGCAGAG +
Preference number: 4 (lower is better)
Translates to: SPPKLAQSPPSGFKSGQDHTVHH*PPASAE
Trigger: CTCTGCGGAGGCGGGCGGCCAGTGATGGACAGTATG...ATCCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp ACAGGGCGATGCCATTGCAGACCCTCCCACTCCTGCTGGGGTCTTTGTAGAAGAGGCTACGAGGGGATGTaGCTTCTGGAGACTGGTTCT +
Preference number: 4 (lower is better)
Translates to: TGRCHCRPSHSCWGLCRRGYEGM*LLETGS
Trigger: AGAACCAGTCTCCAGAAGCCACATCCCCTCGTAGCC...TCTTCTACAAAGACCCCAGCAGGAGTGGGAGGGTCTGCAATGGCATCGCCCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp ACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTCACCCCACTGGGTGGTaGGCTGCTCGGGGAGGTTCC +
Preference number: 4 (lower is better)
Translates to: TFFSPPKLAQSPPSGFKSHPTGW*AARGGS
Trigger: GGAACCTCCCCGAGCAGCCCACCACCCAGTGGGGTG...ACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TTGATTTCCCCTTGCAAAGCAGTTGAGTTAGGGAGACAGAGCTTTTCCATTCCCCCGCACCCCACTGGGTaGTGGGCTGCTCGGGGAGGT +
Preference number: 4 (lower is better)
Translates to: LISPCKAVELGRQSFSIPPHPTG*WAARGG
Trigger: ACCTCCCCGAGCAGCCCACCACCCAGTGGGGTGCGG...GGGAATGGAAAAGCTCTGTCTCCCTAACTCAACTGCTTTGCAAGGGGAAATCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp ACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGACTCCAACAGAGGCTaGGTGGGCGTCCGGGGACCC +
Preference number: 4 (lower is better)
Translates to: TFFSPPKLAQSPPSGFKSDSNRG*VGVRGP
Trigger: GGGTCCCCGGACGCCCACCCAGCCTCTGTTGGAGTC...ACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp ATGTCCCACGGTGGCTCTGTTTGGTTTGACAACCTACCCCACAGGTGGCCAGAATCAAACTGGGACTGCTaGGGGCAGCCATGCTGGGAT +
Preference number: 4 (lower is better)
Translates to: MSHGGSVWFDNLPHRWPESNWDC*GQPCWD
Trigger: ATCCCAGCATGGCTGCCCCCAGCAGTCCCAGTTTGA...TTCTGGCCACCTGTGGGGTAGGTTGTCAAACCAAACAGAGCCACCGTGGGACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TTCCTTCGCAGGTCCCCTCTCCATTGTTTTCTCGCCCAATCCTTCCCTCTTGCTGGTGATGGCTCAAACTaGGACTGCTGGGGGCAGCCA +
Preference number: 4 (lower is better)
Translates to: FLRRSPLHCFLAQSFPLAGDGSN*DCWGQP
Trigger: TGGCTGCCCCCAGCAGTCCCAGTTTGAGCCATCACC...AGCAAGAGGGAAGGATTGGGCGAGAAAACAATGGAGAGGGGACCTGCGAAGGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp GTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCATGGGTCCCCTCCCCACAAGGAAGCCAGTGCCTGGTaGACCCATCATCTGGTGATG +
Preference number: 4 (lower is better)
Translates to: VLLLGSRVVRIHGSPPHKEASAW*THHLVM
Trigger: CATCACCAGATGATGGGTCCACCAGGCACTGGCTTC...CTTGTGGGGAGGGGACCCATGAATCCTGACCACTCTTGAACCCAGAAGGAGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp CACATGCGCACACACGTCCTGTGTTACCACTGGCCAAGGAAACGCGAGTCTCAGGAAGCCAGTGCCTGGTaGACCCATCATCTGGTGATG +
Preference number: 4 (lower is better)
Translates to: HMRTHVLCYHWPRKRESQEASAW*THHLVM
Trigger: CATCACCAGATGATGGGTCCACCAGGCACTGGCTTC...CTGAGACTCGCGTTTCCTTGGCCAGTGGTAACACAGGACGTGTGTGCGCATGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp CGATGCCATTGCAGACCCTCCCACTCCTGCTGGGGTCTTTGTAGAAGAGAAGGGATGGAAGCCAGTGCCTaGTGGACCCATCATCTGGTG +
Preference number: 4 (lower is better)
Translates to: RCHCRPSHSCWGLCRREGMEASA*WTHHLV
Trigger: CACCAGATGATGGGTCCACCAGGCACTGGCTTCCAT...CCCTTCTCTTCTACAAAGACCCCAGCAGGAGTGGGAGGGTCTGCAATGGCATCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp CGATGCCATTGCAGACCCTCCCACTCCTGCTGGGGTCTTTGTAGAAGAGAAGGGGAGACAGTGCTACCATaGAAGCCAGTGCCTGGTGGA +
Preference number: 4 (lower is better)
Translates to: RCHCRPSHSCWGLCRREGETVLP*KPVPGG
Trigger: TCCACCAGGCACTGGCTTCCATGGTAGCACTGTCTC...CCCTTCTCTTCTACAAAGACCCCAGCAGGAGTGGGAGGGTCTGCAATGGCATCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp GGGGAAGACACCCCGAGCTCAACAGCTGCCTGTTCTGACAGATCTCTTCCTATGCACTGCTCTGGGGGCTaGAGACAGTGCTACCATGGA +
Preference number: 4 (lower is better)
Translates to: GEDTPSSTAACSDRSLPMHCSGG*RQCYHG
Trigger: TCCATGGTAGCACTGTCTCCAGCCCCCAGAGCAGTG...CATAGGAAGAGATCTGTCAGAACAGGCAGCTGTTGAGCTCGGGGTGTCTTCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp CTTCCCTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCGTCGCTGCACTGCTCTaGGGGCTGGAGACAGTGCTA +
Preference number: 4 (lower is better)
Translates to: LPSPHVALSSLLRNWPKVVAALL*GLETVL
Trigger: TAGCACTGTCTCCAGCCCCCAGAGCAGTGCAGCGAC...GACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp GCAATTCACTTCCCTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCGACTCCCCGGGGTGGTaGCCACTTTGTTGTGGAGGC +
Preference number: 4 (lower is better)
Translates to: AIHFPLPTLHFLLSSEIGDSPGW*PLCCGG
Trigger: GCCTCCACAACAAAGTGGCCACCACCCCGGGGAGTC...GCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGGGAAGTGAATTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TCTCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGTGGGACTCCCCGGGGTaGTGGCCACTTTGTTGTGGA +
Preference number: 4 (lower is better)
Translates to: SLLRNWPKVLLLGSRVVRWDSPG*WPLCCG
Trigger: TCCACAACAAAGTGGCCACCACCCCGGGGAGTCCCA...CCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp CTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCATTCTGCCGGGACAGTGTaGGTCTCCGATCCTCCGGGG +
Preference number: 4 (lower is better)
Translates to: LRNWPKVLLLGSRVVRIHSAGTV*VSDPPG
Trigger: CCCCGGAGGATCGGAGACCCACACTGTCCCGGCAGA...ATGAATCCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TCTGCAATTCACTTCCCTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATTCTGGTGACGGGGAGGTaGCAGGGCTGCTCAGGCCAG +
Preference number: 4 (lower is better)
Translates to: SAIHFPLPTLHFLLSSEILVTGR*QGCSGQ
Trigger: CTGGCCTGAGCAGCCCTGCCACCTCCCCGTCACCAG...AATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGGGAAGTGAATTGCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp CTTCCCTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCGACTGGACATGCCGCTaGCGACAGGCGAAGACACCT +
Preference number: 4 (lower is better)
Translates to: LPSPHVALSSLLRNWPKVDWTCR*RQAKTP
Trigger: AGGTGTCTTCGCCTGTCGCCAGCGGCATGTCCAGTC...GACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp CCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGGACTGGACATGCCGCTaGCGACAGGCGAAGACACCT +
Preference number: 4 (lower is better)
Translates to: PRCTFFSPPKLAQSPPSGDWTCR*RQAKTP
Trigger: AGGTGTCTTCGCCTGTCGCCAGCGGCATGTCCAGTC...CCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp ACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTCGGTGCTGCCCCCACTaGGACTGGACATGCCGCTGG +
Preference number: 4 (lower is better)
Translates to: TFFSPPKLAQSPPSGFKSRCCPH*DWTCRW
Trigger: CCAGCGGCATGTCCAGTCCCAGTGGGGGCAGCACCG...ACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp CCTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCCTCCCGATGGCCTGCTCCCTaGAGATCTCAGGCTTGTACC +
Preference number: 4 (lower is better)
Translates to: PLPTLHFLLSSEIGPKSSRWPAP*RSQACT
Trigger: GGTACAAGCCTGAGATCTCCAGGGAGCAGGCCATCG...GGAGGACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TGCAGGCACCAGGAGAGAGCCTCTGTCACCCATAGCTTGGTTGTTTGTCCCTCCCAGCGATCCGAAGTTTaGCTCATTGGGGCAGCCCTT +
Preference number: 4 (lower is better)
Translates to: CRHQERASVTHSLVVCPSQRSEV*LIGAAL
Trigger: AAGGGCTGCCCCAATGAGCCAAACTTCGGATCGCTG...GGAGGGACAAACAACCAAGCTATGGGTGACAGAGGCTCTCTCCTGGTGCCTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp GTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCATGGGTCCCCTCCCCACAAGGGTCTGCAGTTGAGTTaGCAGGGCCGGAGCTATCTT +
Preference number: 4 (lower is better)
Translates to: VLLLGSRVVRIHGSPPHKGLQLS*QGRSYL
Trigger: AAGATAGCTCCGGCCCTGCCAACTCAACTGCAGACC...CTTGTGGGGAGGGGACCCATGAATCCTGACCACTCTTGAACCCAGAAGGAGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp GGGGAAGACACCCCGAGCTCAACAGCTGCCTGTTCTGACAGATCTCTTCCTATGAGTGGTCAGGATTCATaGGTCCCCTCCCCACAAGCC +
Preference number: 4 (lower is better)
Translates to: GEDTPSSTAACSDRSLPMSGQDS*VPSPQA
Trigger: GGCTTGTGGGGAGGGGACCCATGAATCCTGACCACT...CATAGGAAGAGATCTGTCAGAACAGGCAGCTGTTGAGCTCGGGGTGTCTTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp ATGTCCCACGGTGGCTCTGTTTGGTTTGACAACCTACCCCACAGGTGGCCAGAAAGTGGTCAGGATTCATaGGTCCCCTCCCCACAAGCC +
Preference number: 4 (lower is better)
Translates to: MSHGGSVWFDNLPHRWPESGQDS*VPSPQA
Trigger: GGCTTGTGGGGAGGGGACCCATGAATCCTGACCACT...TTCTGGCCACCTGTGGGGTAGGTTGTCAAACCAAACAGAGCCACCGTGGGACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TGGTCAGGTGTTTTCCCAACTGTCCAGTGGACCTTAGGCCCTTTGGCCCAAGTGAGTGGTCAGGATTCATaGGTCCCCTCCCCACAAGCC +
Preference number: 4 (lower is better)
Translates to: WSGVFPTVQWTLGPLAQVSGQDS*VPSPQA
Trigger: GGCTTGTGGGGAGGGGACCCATGAATCCTGACCACT...CACTTGGGCCAAAGGGCCTAAGGTCCACTGGACAGTTGGGAAAACACCTGACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp GTAGAAGAGAAGGGTCTGGCGGCACCCAGGGTCACTAGAGTGCAGGTGCAGGCAAACCTACCCCACAGGTaGCCAGAAAAAGATTCTCCC +
Preference number: 4 (lower is better)
Translates to: VEEKGLAAPRVTRVQVQANLPHR*PEKDSP
Trigger: GGGAGAATCTTTTTCTGGCCACCTGTGGGGTAGGTT...TGCCTGCACCTGCACTCTAGTGACCCTGGGTGCCGCCAGACCCTTCTCTTCTAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp CCCAACTGTCCAGTGGACCTTAGGCCCTTTGGCCCAAGTGCAAGCCTTCTGCCCGTGTCTACAAACACATaGGACAAGGACAAGCCGAGC +
Preference number: 4 (lower is better)
Translates to: PNCPVDLRPFGPSASLLPVSTNT*DKDKPS
Trigger: GCTCGGCTTGTCCTTGTCCCATGTGTTTGTAGACAC...GGGCAGAAGGCTTGCACTTGGGCCAAAGGGCCTAAGGTCCACTGGACAGTTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TCTGCCCTCTGCTGCATGGGCAGCGTGGCTCAGCTAGGGAAACCAAGGCAGAAACCCTCCCACTCCTGCTaGGGTCTTTGTAGAAGAGAA +
Preference number: 4 (lower is better)
Translates to: SALCCMGSVAQLGKPRQKPSHSC*GLCRRE
Trigger: TTCTCTTCTACAAAGACCCCAGCAGGAGTGGGAGGG...TTTCTGCCTTGGTTTCCCTAGCTGAGCCACGCTGCCCATGCAGCAGAGGGCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp CCCAACTGTCCAGTGGACCTTAGGCCCTTTGGCCCAAGTGCAAGCCTTCTGCCCGAAGGAAGAGCACTTTaGAGGGACTTTGGTCACCAG +
Preference number: 4 (lower is better)
Translates to: PNCPVDLRPFGPSASLLPEGRAL*RDFGHQ
Trigger: CTGGTGACCAAAGTCCCTCCAAAGTGCTCTTCCTTC...GGGCAGAAGGCTTGCACTTGGGCCAAAGGGCCTAAGGTCCACTGGACAGTTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp ATGCGCACACACGTCCTGTGTTACCACTGGCCAAGGAAACGCGAGTCTCAGGATCCAGGAATAGGCTCCTaGGCTCTCCAGTGGGAGATG +
Preference number: 4 (lower is better)
Translates to: MRTHVLCYHWPRKRESQDPGIGS*ALQWEM
Trigger: CATCTCCCACTGGAGAGCCCAGGAGCCTATTCCTGG...ATCCTGAGACTCGCGTTTCCTTGGCCAGTGGTAACACAGGACGTGTGTGCGCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp ACCCTCCTTTCCAACTCCCTGAAACAGAACGTCCACACTGACACAGCTCCTTGGGCTTTCTGGCATGAATaGGTCCTCCCGCAGGGGCAC +
Preference number: 4 (lower is better)
Translates to: TLLSNSLKQNVHTDTAPWAFWHE*VLPQGH
Trigger: GTGCCCCTGCGGGAGGACCCATTCATGCCAGAAAGC...CCAAGGAGCTGTGTCAGTGTGGACGTTCTGTTTCAGGGAGTTGGAAAGGAGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp ACCCTCCTTTCCAACTCCCTGAAACAGAACGTCCACACTGACACAGCTCCTTGGGGCCACTGTGGGGACTaGGGAACCCTTCCCCATCAT +
Preference number: 4 (lower is better)
Translates to: TLLSNSLKQNVHTDTAPWGHCGD*GTLPHH
Trigger: ATGATGGGGAAGGGTTCCCCAGTCCCCACAGTGGCC...CCAAGGAGCTGTGTCAGTGTGGACGTTCTGTTTCAGGGAGTTGGAAAGGAGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp CTTCCCTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCCAGCTGGACAGCTGGTaGCAGCACGGGACTGAACCT +
Preference number: 4 (lower is better)
Translates to: LPSPHVALSSLLRNWPKVQLDSW*QHGTEP
Trigger: AGGTTCAGTCCCGTGCTGCCACCAGCTGTCCAGCTG...GACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp CGATGCCATTGCAGACCCTCCCACTCCTGCTGGGGTCTTTGTAGAAGAGAAGGGGGGGAGAAGGAATCCTaGCCATTGGTGTCCACAGCT +
Preference number: 4 (lower is better)
Translates to: RCHCRPSHSCWGLCRREGGEKES*PLVSTA
Trigger: AGCTGTGGACACCAATGGCCAGGATTCCTTCTCCCC...CCCTTCTCTTCTACAAAGACCCCAGCAGGAGTGGGAGGGTCTGCAATGGCATCG
57% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp CGATGCCATTGCAGACCCTCCCACTCCTGCTGGGGTCTTTGTAGAAGAGAAGGGACTCCACCAATTGGTTaGCCTACAGGCCTCACCTCC +
Preference number: 4 (lower is better)
Translates to: RCHCRPSHSCWGLCRREGTPPIG*PTGLTS
Trigger: GGAGGTGAGGCCTGTAGGCCAACCAATTGGTGGAGT...CCCTTCTCTTCTACAAAGACCCCAGCAGGAGTGGGAGGGTCTGCAATGGCATCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TCTCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGCCCACCCTGCCCCTCTaGGTGAACCACTTCTCACCT +
Preference number: 4 (lower is better)
Translates to: SLLRNWPKVLLLGSRVVRPTLPL*VNHFSP
Trigger: AGGTGAGAAGTGGTTCACCCAGAGGGGCAGGGTGGG...CCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp ACAGGGCGATGCCATTGCAGACCCTCCCACTCCTGCTGGGGTCTTTGTAGAAGAGCAAGAGCCCAGGCGTaGGATATGAACAGAGGTCCT +
Preference number: 4 (lower is better)
Translates to: TGRCHCRPSHSCWGLCRRARAQA*DMNRGP
Trigger: AGGACCTCTGTTCATATCCCACGCCTGGGCTCTTGC...TCTTCTACAAAGACCCCAGCAGGAGTGGGAGGGTCTGCAATGGCATCGCCCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp ATGTCCCACGGTGGCTCTGTTTGGTTTGACAACCTACCCCACAGGTGGCCAGAACTCCGGGGCTCTGGCTaGATCCGTCTTCTGGTAACT +
Preference number: 4 (lower is better)
Translates to: MSHGGSVWFDNLPHRWPELRGSG*IRLLVT
Trigger: AGTTACCAGAAGACGGATCCAGCCAGAGCCCCGGAG...TTCTGGCCACCTGTGGGGTAGGTTGTCAAACCAAACAGAGCCACCGTGGGACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000419504.5
ENST00000611415.4
CDS-3UTR CCA 90 bp TCTGCCCTCTGCTGCATGGGCAGCGTGGCTCAGCTAGGGAAACCAAGGCAGAAATGCCAGTTCCTATGCTaGTTCCCTCCTCCTGTCTGT +
Preference number: 4 (lower is better)
Translates to: SALCCMGSVAQLGKPRQKCQFLC*FPPPVC
Trigger: ACAGACAGGAGGAGGGAACCAGCATAGGAACTGGCA...TTTCTGCCTTGGTTTCCCTAGCTGAGCCACGCTGCCCATGCAGCAGAGGGCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446688.5
CDS-3UTR CCA 90 bp TCTCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGGCCCACCTGGATCTCTaGAGAGGCCCCTTTTTGCCC +
Preference number: 4 (lower is better)
Translates to: SLLRNWPKVLLLGSRVVRAHLDL*RGPFLP
Trigger: GGGCAAAAAGGGGCCTCTCCAGAGATCCAGGTGGGC...CCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000646520.1
3UTR CAA 72 bp GGTGTTTTCCCAACTGTCCAGTGGACCTTAGGCCCTTaGGCCCAAGTGCAAGCCTTCTGCCCTCTGCTGCAT +
Preference number: 4 (lower is better)
Translates to: GVFPTVQWTLGP*AQVQAFCPLLH
Trigger: ATGCAGCAGAGGGCAGAAGGCTTGCACTTGGGCCAAAGGGCCTAAGGTCCACTGGACAGTTGGGAAAACACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000646520.1
ENST00000651849.1
3UTR CAA 72 bp CCCTCACTGCTGGGCGACATTGAATTTGAAGTTCCATaGCCCAGCACCTCCAACCCCGACTCCCAAGTTCCC +
Preference number: 4 (lower is better)
Translates to: PSLLGDIEFEVP*PSTSNPDSQVP
Trigger: GGGAACTTGGGAGTCGGGGTTGGAGGTGCTGGGCAATGGAACTTCAAATTCAATGTCGCCCAGCAGTGAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp ATGTCCCACGGTGGCTCTGTTTGGTTTGACAACCTACCCCACAGGTGGCCAGAAGTGCATTCTCAGTGGTaGTGGGCACCAGCTCATGGT +
Preference number: 4 (lower is better)
Translates to: MSHGGSVWFDNLPHRWPEVHSQW*WAPAHG
Trigger: ACCATGAGCTGGTGCCCATCACCACTGAGAATGCAC...TTCTGGCCACCTGTGGGGTAGGTTGTCAAACCAAACAGAGCCACCGTGGGACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp ATGTCCCACGGTGGCTCTGTTTGGTTTGACAACCTACCCCACAGGTGGCCAGAATCACACTCATGTTTCTaGTGGGCTGGAGGTGGGGCT +
Preference number: 4 (lower is better)
Translates to: MSHGGSVWFDNLPHRWPESHSCF*WAGGGA
Trigger: AGCCCCACCTCCAGCCCATCAGAAACATGAGTGTGA...TTCTGGCCACCTGTGGGGTAGGTTGTCAAACCAAACAGAGCCACCGTGGGACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp ATGTCCCACGGTGGCTCTGTTTGGTTTGACAACCTACCCCACAGGTGGCCAGAACTCCATGTTTGGACTTaGGCATCTGCGCCACCTCAC +
Preference number: 4 (lower is better)
Translates to: MSHGGSVWFDNLPHRWPELHVWT*ASAPPH
Trigger: GTGAGGTGGCGCAGATGCTCAAGTCCAAACATGGAG...TTCTGGCCACCTGTGGGGTAGGTTGTCAAACCAAACAGAGCCACCGTGGGACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp TTCCTTCGCAGGTCCCCTCTCCATTGTTTTCTCGCCCAATCCTTCCCTCTTGCTTGGCATGGAGCTTCGTaGTGTCAGGTCTCCGCTCAG +
Preference number: 4 (lower is better)
Translates to: FLRRSPLHCFLAQSFPLAWHGAS*CQVSAQ
Trigger: CTGAGCGGAGACCTGACATCACGAAGCTCCATGCCA...AGCAAGAGGGAAGGATTGGGCGAGAAAACAATGGAGAGGGGACCTGCGAAGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp ATTGGTTGGCCTACAGGCCTCACCTCCCGACTCCCCTCACTGCTGGGCGACATTAGAACAACGACATTGTaGGGGTCTGCATTGAGCCAT +
Preference number: 4 (lower is better)
Translates to: IGWPTGLTSRLPSLLGDIRTTTL*GSALSH
Trigger: ATGGCTCAATGCAGACCCTCACAATGTCGTTGTTCT...AATGTCGCCCAGCAGTGAGGGGAGTCGGGAGGTGAGGCCTGTAGGCCAACCAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp ATGTCCCACGGTGGCTCTGTTTGGTTTGACAACCTACCCCACAGGTGGCCAGAAGCATGTAAGCCGCGATaGCAACTCCTATCCTGCCTC +
Preference number: 4 (lower is better)
Translates to: MSHGGSVWFDNLPHRWPEACKPR*QLLSCL
Trigger: GAGGCAGGATAGGAGTTGTCATCGCGGCTTACATGC...TTCTGGCCACCTGTGGGGTAGGTTGTCAAACCAAACAGAGCCACCGTGGGACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp TGGTCAGGTGTTTTCCCAACTGTCCAGTGGACCTTAGGCCCTTTGGCCCAAGTGCGGAGAGCAGGCCACTaGAGTAATGCACGTACCTTC +
Preference number: 4 (lower is better)
Translates to: WSGVFPTVQWTLGPLAQVRRAGH*SNARTF
Trigger: GAAGGTACGTGCATTACTTCAGTGGCCTGCTCTCCG...CACTTGGGCCAAAGGGCCTAAGGTCCACTGGACAGTTGGGAAAACACCTGACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp GTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCATGGGTCCCCTCCCCACAAGGCTTGTTGTTCATTTTaGTGGAGCCGGAGAGCAGGC +
Preference number: 4 (lower is better)
Translates to: VLLLGSRVVRIHGSPPHKACCSF*WSRRAG
Trigger: GCCTGCTCTCCGGCTCCATCAAAATGAACAACAAGC...CTTGTGGGGAGGGGACCCATGAATCCTGACCACTCTTGAACCCAGAAGGAGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp TGGTCAGGTGTTTTCCCAACTGTCCAGTGGACCTTAGGCCCTTTGGCCCAAGTGTGGGGATGCCGTGCATaGTCACGTGGTGCAGAAACA +
Preference number: 4 (lower is better)
Translates to: WSGVFPTVQWTLGPLAQVWGCRA*SRGAET
Trigger: TGTTTCTGCACCACGTGATCATGCACGGCATCCCCA...CACTTGGGCCAAAGGGCCTAAGGTCCACTGGACAGTTGGGAAAACACCTGACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp CCTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCCTCCTGGGGATGCCGTGCATaGTCACGTGGTGCAGAAACA +
Preference number: 4 (lower is better)
Translates to: PLPTLHFLLSSEIGPKSSWGCRA*SRGAET
Trigger: TGTTTCTGCACCACGTGATCATGCACGGCATCCCCA...GGAGGACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp CACAGGGCAGAGTCCAGGAGCCAGAACACTTCCTTGGCTTGGAAAAGGAAAAAGACTGCACACGGAAGATaGCGTCTCGGGCTGGGCTTC +
Preference number: 4 (lower is better)
Translates to: HRAESRSQNTSLAWKRKKTAHGR*RLGLGF
Trigger: GAAGCCCAGCCCGAGACGTCATCTTCCGTGTGCAGT...CTTTTTCCTTTTCCAAGCCAAGGAAGTGTTCTGGCTCCTGGACTCTGCCCTGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310858.10
CDS-3UTR TCA 90 bp CCTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCCTCCCATCTCGATGCCCACTaGAGTTGTCGTAGGAGTCCC +
Preference number: 4 (lower is better)
Translates to: PLPTLHFLLSSEIGPKSSHLDAH*SCRRSP
Trigger: GGGACTCCTACGACAACTTCAGTGGGCATCGAGATG...GGAGGACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp ATGTCCAGGATAAGGAGCATACACCAGGATTTATACACGGTGGCAGCGGCTATACTGCTGGGCGGGACCTaGGGTGCTGGGTGTGGTACA +
Preference number: 4 (lower is better)
Translates to: MSRIRSIHQDLYTVAAAILLGGT*GAGCGT
Trigger: TGTACCACACCCAGCACCTCAGGTCCCGCCCAGCAG...TATAGCCGCTGCCACCGTGTATAAATCCTGGTGTATGCTCCTTATCCTGGACAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp ACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTCTGCTGGGCGGGACCTaGGGTGCTGGGTGTGGTACA +
Preference number: 4 (lower is better)
Translates to: TFFSPPKLAQSPPSGFKSLLGGT*GAGCGT
Trigger: TGTACCACACCCAGCACCTCAGGTCCCGCCCAGCAG...ACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp AATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCATGGGTCCGCCCCACCATTGACATaGACCTGGGCTGGGACAACG +
Preference number: 4 (lower is better)
Translates to: NWPKVLLLGSRVVRIHGSAPPLT*TWAGTT
Trigger: CGTTGTCCCAGCCCAGGTTCATGTCAATGGTGGGGC...GGACCCATGAATCCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp TCTGCCCTCTGCTGCATGGGCAGCGTGGCTCAGCTAGGGAAACCAAGGCAGAAAAGAGGCTGGGCTCTTTaGATGGAAATCCTGGTTAGG +
Preference number: 4 (lower is better)
Translates to: SALCCMGSVAQLGKPRQKRGWAL*MEILVR
Trigger: CCTAACCAGGATTTCCATTCAAAGAGCCCAGCCTCT...TTTCTGCCTTGGTTTCCCTAGCTGAGCCACGCTGCCCATGCAGCAGAGGGCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp CCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGATGTCCGCTGGGTTGTaGGGTTTCAGGCCCAGAGCA +
Preference number: 4 (lower is better)
Translates to: PRCTFFSPPKLAQSPPSGMSAGL*GFRPRA
Trigger: TGCTCTGGGCCTGAAACCTCACAACCCAGCGGACAT...CCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp CCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGCGGGAAACTCCCCACTaGAGTGCTGTCAGCACTGAG +
Preference number: 4 (lower is better)
Translates to: PRCTFFSPPKLAQSPPSGRETPH*SAVSTE
Trigger: CTCAGTGCTGACAGCACTTCAGTGGGGAGTTTCCCG...CCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp CTTCCCTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCCGGGAAACTCCCCACTaGAGTGCTGTCAGCACTGAG +
Preference number: 4 (lower is better)
Translates to: LPSPHVALSSLLRNWPKVRETPH*SAVSTE
Trigger: CTCAGTGCTGACAGCACTTCAGTGGGGAGTTTCCCG...GACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp CTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCATCTGTCCCAGGCTGCCTaGGCGGAAGCCAGACTCCAA +
Preference number: 4 (lower is better)
Translates to: LRNWPKVLLLGSRVVRIHLSQAA*AEARLQ
Trigger: TTGGAGTCTGGCTTCCGCTCAGGCAGCCTGGGACAG...ATGAATCCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp GCAATTCACTTCCCTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCCCAGCCACACTGAACTaGGCTCGAGCCTGGCTTTCC +
Preference number: 4 (lower is better)
Translates to: AIHFPLPTLHFLLSSEIGPATLN*ARAWLS
Trigger: GGAAAGCCAGGCTCGAGCTCAGTTCAGTGTGGCTGG...GCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGGGAAGTGAATTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp AGATCTAGATCAATGTGTGAGGATGTGGGTGCAGACACACACCCACACGACAATCAGCCATGCTGGGATTaGTGGCCCGCCAGCCGAAGC +
Preference number: 4 (lower is better)
Translates to: RSRSMCEDVGADTHPHDNQPCWD*WPASRS
Trigger: GCTTCGGCTGGCGGGCCATCAATCCCAGCATGGCTG...ATTGTCGTGTGGGTGTGTGTCTGCACCCACATCCTCACACATTGATCTAGATCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp TCTGCAATTCACTTCCCTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATTCAGCCATGCTGGGATTaGTGGCCCGCCAGCCGAAGC +
Preference number: 4 (lower is better)
Translates to: SAIHFPLPTLHFLLSSEIQPCWD*WPASRS
Trigger: GCTTCGGCTGGCGGGCCATCAATCCCAGCATGGCTG...AATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGGGAAGTGAATTGCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp AATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCATGGGTCCTGCCCGGTCTCCCACTaGCATCCTTCGCTTCTCTGG +
Preference number: 4 (lower is better)
Translates to: NWPKVLLLGSRVVRIHGSCPVSH*HPSLLW
Trigger: CCAGAGAAGCGAAGGATGTCAGTGGGAGACCGGGCA...GGACCCATGAATCCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp CGCAGGGATGCTGGGAGGGAGTTACCAGCTTTCTGGCATGAATGGGTCCTCCCGTTTTATTCTGCTGCATaGTGGTTGGAGGTGGCGAAG +
Preference number: 4 (lower is better)
Translates to: RRDAGRELPAFWHEWVLPFYSAA*WLEVAK
Trigger: CTTCGCCACCTCCAACCATCATGCAGCAGAATAAAA...CGGGAGGACCCATTCATGCCAGAAAGCTGGTAACTCCCTCCCAGCATCCCTGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp TCTCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGGGTCTCGGTTTGGAATaGCCAGCTTGCAAGGCAGGG +
Preference number: 4 (lower is better)
Translates to: SLLRNWPKVLLLGSRVVRGLGLE*PACKAG
Trigger: CCCTGCCTTGCAAGCTGGTCATTCCAAACCGAGACC...CCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp AATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCATGGGTCCCCTTGGAGACGAAGTTaGCGATGGCAGAGGCCGGCT +
Preference number: 4 (lower is better)
Translates to: NWPKVLLLGSRVVRIHGSPWRRS*RWQRPA
Trigger: AGCCGGCCTCTGCCATCGTCAACTTCGTCTCCAAGG...GGACCCATGAATCCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp GGGCGATGCCATTGCAGACCCTCCCACTCCTGCTGGGGTCTTTGTAGAAGAGAATGGCTCTGTTTGGTTTaGCAACCTACCCCACAGGTG +
Preference number: 4 (lower is better)
Translates to: GRCHCRPSHSCWGLCRREWLCLV*QPTPQV
Trigger: CACCTGTGGGGTAGGTTGTCAAACCAAACAGAGCCA...TTCTCTTCTACAAAGACCCCAGCAGGAGTGGGAGGGTCTGCAATGGCATCGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp GGGCGATGCCATTGCAGACCCTCCCACTCCTGCTGGGGTCTTTGTAGAAGAGAAACAAGTTCTTCCACTTaGTGTCCCACGGTGGCTCTG +
Preference number: 4 (lower is better)
Translates to: GRCHCRPSHSCWGLCRRETSSST*CPTVAL
Trigger: CAGAGCCACCGTGGGACATCAAGTGGAAGAACTTGT...TTCTCTTCTACAAAGACCCCAGCAGGAGTGGGAGGGTCTGCAATGGCATCGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp GTAGAAGAGAAGGGTCTGGCGGCACCCAGGGTCACTAGAGTGCAGGTGCAGGCAAACAGCTGCCTGTTCTaGCAGATCTCTTCCTATGGA +
Preference number: 4 (lower is better)
Translates to: VEEKGLAAPRVTRVQVQANSCLF*QISSYG
Trigger: TCCATAGGAAGAGATCTGTCAGAACAGGCAGCTGTT...TGCCTGCACCTGCACTCTAGTGACCCTGGGTGCCGCCAGACCCTTCTCTTCTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp CCTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCCTCCGCTGGTCCAGGGGCATaGAACCCAATAACAAGGCTG +
Preference number: 4 (lower is better)
Translates to: PLPTLHFLLSSEIGPKSSAGPGA*NPITRL
Trigger: CAGCCTTGTTATTGGGTTTCATGCCCCTGGACCAGC...GGAGGACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp ATGCGCACACACGTCCTGTGTTACCACTGGCCAAGGAAACGCGAGTCTCAGGATGCTGGTCCAGGGGCATaGAACCCAATAACAAGGCTG +
Preference number: 4 (lower is better)
Translates to: MRTHVLCYHWPRKRESQDAGPGA*NPITRL
Trigger: CAGCCTTGTTATTGGGTTTCATGCCCCTGGACCAGC...ATCCTGAGACTCGCGTTTCCTTGGCCAGTGGTAACACAGGACGTGTGTGCGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp CCTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCCTCCACAGAACGTCCACACTaGCACAGCTCCTTGGAGGAG +
Preference number: 4 (lower is better)
Translates to: PLPTLHFLLSSEIGPKSSTERPH*HSSLEE
Trigger: CTCCTCCAAGGAGCTGTGTCAGTGTGGACGTTCTGT...GGAGGACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp GTGAGGAAGGGAAAAGCGACCGTGAAAGCTGACCCCAGACTCAGTCCTGGGCCCCCCCATCATTCGCCTTaGAAAGTCACACTCTCAGAA +
Preference number: 4 (lower is better)
Translates to: VRKGKATVKADPRLSPGPPHHSP*KVTLSE
Trigger: TTCTGAGAGTGTGACTTTTCAAGGCGAATGATGGGG...GGGCCCAGGACTGAGTCTGGGGTCAGCTTTCACGGTCGCTTTTCCCTTCCTCAC
56% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp CCCAACTGTCCAGTGGACCTTAGGCCCTTTGGCCCAAGTGCAAGCCTTCTGCCCCCCCATCATTCGCCTTaGAAAGTCACACTCTCAGAA +
Preference number: 4 (lower is better)
Translates to: PNCPVDLRPFGPSASLLPPHHSP*KVTLSE
Trigger: TTCTGAGAGTGTGACTTTTCAAGGCGAATGATGGGG...GGGCAGAAGGCTTGCACTTGGGCCAAAGGGCCTAAGGTCCACTGGACAGTTGGG
56% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp TCTGCCCTCTGCTGCATGGGCAGCGTGGCTCAGCTAGGGAAACCAAGGCAGAAATACTCACTAACCTCCTaGGAGCCGTTTATAGGGGGA +
Preference number: 4 (lower is better)
Translates to: SALCCMGSVAQLGKPRQKYSLTS*EPFIGG
Trigger: TCCCCCTATAAACGGCTCTCAGGAGGTTAGTGAGTA...TTTCTGCCTTGGTTTCCCTAGCTGAGCCACGCTGCCCATGCAGCAGAGGGCAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp CCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGGGGAAGGATGCTGGGTaGTCTTGTTTCCCCCGCAGA +
Preference number: 4 (lower is better)
Translates to: PRCTFFSPPKLAQSPPSGGKDAG*SCFPRR
Trigger: TCTGCGGGGGAAACAAGATCACCCAGCATCCTTCCC...CCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGG
56% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp TCTCCTGGCCAGTCTCAGAAGACCCAGGGATCCTCAAAAACCAGGGGAGAAGGAGCCTGGCATTTCCGATaGCAGGAGAAGCTGCAGACT +
Preference number: 4 (lower is better)
Translates to: SPGQSQKTQGSSKTRGEGAWHFR*QEKLQT
Trigger: AGTCTGCAGCTTCTCCTGTCATCGGAAATGCCAGGC...TCCTTCTCCCCTGGTTTTTGAGGATCCCTGGGTCTTCTGAGACTGGCCAGGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp GGGCGATGCCATTGCAGACCCTCCCACTCCTGCTGGGGTCTTTGTAGAAGAGAATGGCCTTACAGATGCTaGAGATCTTCTCCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: GRCHCRPSHSCWGLCRREWPYRC*RSSPGL
Trigger: CAGCCCTGGAGAAGATCTGCAGCATCTGTAAGGCCA...TTCTCTTCTACAAAGACCCCAGCAGGAGTGGGAGGGTCTGCAATGGCATCGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp ACAGGGCGATGCCATTGCAGACCCTCCCACTCCTGCTGGGGTCTTTGTAGAAGATGGCCTTACAGATGCTaGAGATCTTCTCCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: TGRCHCRPSHSCWGLCRRWPYRC*RSSPGL
Trigger: CAGCCCTGGAGAAGATCTGCAGCATCTGTAAGGCCA...TCTTCTACAAAGACCCCAGCAGGAGTGGGAGGGTCTGCAATGGCATCGCCCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp GGGCGATGCCATTGCAGACCCTCCCACTCCTGCTGGGGTCTTTGTAGAAGAGAACCATGGCCTTACAGATaGTGCAGATCTTCTCCAGGG +
Preference number: 4 (lower is better)
Translates to: GRCHCRPSHSCWGLCRREPWPYR*CRSSPG
Trigger: CCCTGGAGAAGATCTGCAGCATCTGTAAGGCCATGG...TTCTCTTCTACAAAGACCCCAGCAGGAGTGGGAGGGTCTGCAATGGCATCGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp ATTGGTTGGCCTACAGGCCTCACCTCCCGACTCCCCTCACTGCTGGGCGACATTGACATTGTGAGGGTCTaGATTGAGCCATGTGTCCAT +
Preference number: 4 (lower is better)
Translates to: IGWPTGLTSRLPSLLGDIDIVRV*IEPCVH
Trigger: ATGGACACATGGCTCAATGCAGACCCTCACAATGTC...AATGTCGCCCAGCAGTGAGGGGAGTCGGGAGGTGAGGCCTGTAGGCCAACCAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp GTAGAAGAGAAGGGTCTGGCGGCACCCAGGGTCACTAGAGTGCAGGTGCAGGCAGACATTGTGAGGGTCTaGATTGAGCCATGTGTCCAT +
Preference number: 4 (lower is better)
Translates to: VEEKGLAAPRVTRVQVQADIVRV*IEPCVH
Trigger: ATGGACACATGGCTCAATGCAGACCCTCACAATGTC...TGCCTGCACCTGCACTCTAGTGACCCTGGGTGCCGCCAGACCCTTCTCTTCTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp GCTATCGCTGAGACTCCACCAATTGGTTGGCCTACAGGCCTCACCTCCCGACTCATAGAACCGCTTCATTaGAAACCGGTCCAGAGCCTG +
Preference number: 4 (lower is better)
Translates to: AIAETPPIGWPTGLTSRLIEPLH*KPVQSL
Trigger: CAGGCTCTGGACCGGTTTGCAATGAAGCGGTTCTAT...GAGTCGGGAGGTGAGGCCTGTAGGCCAACCAATTGGTGGAGTCTCAGCGATAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp GTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCATGGGTCCCCTCCCCACAAGGCACAGGTGTGGAACTaGACACGGAAGATGACGTCT +
Preference number: 4 (lower is better)
Translates to: VLLLGSRVVRIHGSPPHKAQVWN*TRKMTS
Trigger: AGACGTCATCTTCCGTGTGCAGTTCCACACCTGTGC...CTTGTGGGGAGGGGACCCATGAATCCTGACCACTCTTGAACCCAGAAGGAGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp GCAATTCACTTCCCTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCCCACCACCTCCTCCATaGCGTCATCTCGATGCCCAC +
Preference number: 4 (lower is better)
Translates to: AIHFPLPTLHFLLSSEIGPPPPP*RHLDAH
Trigger: GTGGGCATCGAGATGACGGCATGGAGGAGGTGGTGG...GCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGGGAAGTGAATTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp CTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCATCCATCTAGTGGCCCCTaGGTGTGTCCCACCACCTCC +
Preference number: 4 (lower is better)
Translates to: LRNWPKVLLLGSRVVRIHPSSGP*VCPTTS
Trigger: GGAGGTGGTGGGACACACGCAGGGGCCACTAGATGG...ATGAATCCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp CACATGCGCACACACGTCCTGTGTTACCACTGGCCAAGGAAACGCGAGTCTCAGAGTTGCCCGAGTCGCTaGTCACAGAAAGCGTGTGTT +
Preference number: 4 (lower is better)
Translates to: HMRTHVLCYHWPRKRESQSCPSR*SQKACV
Trigger: AACACACGCTTTCTGTGAGCAGCGACTCGGGCAACT...CTGAGACTCGCGTTTCCTTGGCCAGTGGTAACACAGGACGTGTGTGCGCATGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp GTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCATGGGTCCCCTCCCCACAAGAGTTGCCCGAGTCGCTaGTCACAGAAAGCGTGTGTT +
Preference number: 4 (lower is better)
Translates to: VLLLGSRVVRIHGSPPHKSCPSR*SQKACV
Trigger: AACACACGCTTTCTGTGAGCAGCGACTCGGGCAACT...CTTGTGGGGAGGGGACCCATGAATCCTGACCACTCTTGAACCCAGAAGGAGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp ACAGGGCGATGCCATTGCAGACCCTCCCACTCCTGCTGGGGTCTTTGTAGAAGATGGTACATGGCGCCTTaGTTCTCTCGCTCTAAGCCA +
Preference number: 4 (lower is better)
Translates to: TGRCHCRPSHSCWGLCRRWYMAP*FSRSKP
Trigger: TGGCTTAGAGCGAGAGAAGCAAGGCGCCATGTACCA...TCTTCTACAAAGACCCCAGCAGGAGTGGGAGGGTCTGCAATGGCATCGCCCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp TCTCCTGGCCAGTCTCAGAAGACCCAGGGATCCTCAAAAACCAGGGGAGAAGGAGAATTCAGTCCCCTTTaGACAGCCTCCCGGCTGCTT +
Preference number: 4 (lower is better)
Translates to: SPGQSQKTQGSSKTRGEGEFSPL*TASRLL
Trigger: AAGCAGCCGGGAGGCTGTGCAAAGGGGACTGAATTC...TCCTTCTCCCCTGGTTTTTGAGGATCCCTGGGTCTTCTGAGACTGGCCAGGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp TCTCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGTGCTGCTGCTGCTGCTaGTGCCACGAATTCAGTCCC +
Preference number: 4 (lower is better)
Translates to: SLLRNWPKVLLLGSRVVRCCCCC*CHEFSP
Trigger: GGGACTGAATTCGTGGCAGCAGCAGCAGCAGCAGCA...CCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp TCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATGACTGTTCAATCTCCTaGTGGGAGGCTGCTCGCGGG +
Preference number: 4 (lower is better)
Translates to: SPPKLAQSPPSGFKSGQDDCSIS*WEAARG
Trigger: CCCGCGAGCAGCCTCCCAGCAGGAGATTGAACAGTC...ATCCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp ACAGGGCGATGCCATTGCAGACCCTCCCACTCCTGCTGGGGTCTTTGTAGAAGAAAGGTGAGTAAGACCTaGCAGGAGGGACAGACTCCA +
Preference number: 4 (lower is better)
Translates to: TGRCHCRPSHSCWGLCRRKVSKT*QEGQTP
Trigger: TGGAGTCTGTCCCTCCTGGCAGGTCTTACTCACCTT...TCTTCTACAAAGACCCCAGCAGGAGTGGGAGGGTCTGCAATGGCATCGCCCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp TTGGAGGCTTTGGGTTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTAGGGGCTGGGGGCTCTaGAGGCTGCTTCTCCCGAGC +
Preference number: 4 (lower is better)
Translates to: LEALGFCSFHLPRGIQVLRGWGL*RLLLPS
Trigger: GCTCGGGAGAAGCAGCCTGCAGAGCCCCCAGCCCCT...AAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAACCCAAAGCCTCCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp TTGATTTCCCCTTGCAAAGCAGTTGAGTTAGGGAGACAGAGCTTTTCCATTCCCAGGGGCTGGGGGCTCTaGAGGCTGCTTCTCCCGAGC +
Preference number: 4 (lower is better)
Translates to: LISPCKAVELGRQSFSIPRGWGL*RLLLPS
Trigger: GCTCGGGAGAAGCAGCCTGCAGAGCCCCCAGCCCCT...GGGAATGGAAAAGCTCTGTCTCCCTAACTCAACTGCTTTGCAAGGGGAAATCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp TCTCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGAGCCACCGCTGTCCGTaGCACAGACTCCACATAGCT +
Preference number: 4 (lower is better)
Translates to: SLLRNWPKVLLLGSRVVRSHRCP*HRLHIA
Trigger: AGCTATGTGGAGTCTGTGGCACGGACAGCGGTGGCT...CCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp CCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGAGCCACCGCTGTCCGTaGCACAGACTCCACATAGCT +
Preference number: 4 (lower is better)
Translates to: PRCTFFSPPKLAQSPPSGSHRCP*HRLHIA
Trigger: AGCTATGTGGAGTCTGTGGCACGGACAGCGGTGGCT...CCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp ACCCTCCTTTCCAACTCCCTGAAACAGAACGTCCACACTGACACAGCTCCTTGGAGCCACCGCTGTCCGTaGCACAGACTCCACATAGCT +
Preference number: 4 (lower is better)
Translates to: TLLSNSLKQNVHTDTAPWSHRCP*HRLHIA
Trigger: AGCTATGTGGAGTCTGTGGCACGGACAGCGGTGGCT...CCAAGGAGCTGTGTCAGTGTGGACGTTCTGTTTCAGGGAGTTGGAAAGGAGGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp AATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCATGGGTCCGGCTGCTGTAGCTACTaGCCACAGTCGGGAGAGGAG +
Preference number: 4 (lower is better)
Translates to: NWPKVLLLGSRVVRIHGSGCCSY*PQSGEE
Trigger: CTCCTCTCCCGACTGTGGGCAGTAGCTACAGCAGCC...GGACCCATGAATCCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp TTCCTTCGCAGGTCCCCTCTCCATTGTTTTCTCGCCCAATCCTTCCCTCTTGCTGTGAGTAGTCGGGGCTaGTGTAGCTACTGCCCACAG +
Preference number: 4 (lower is better)
Translates to: FLRRSPLHCFLAQSFPLAVSSRG*CSYCPQ
Trigger: CTGTGGGCAGTAGCTACAGCAGCCCCGACTACTCAC...AGCAAGAGGGAAGGATTGGGCGAGAAAACAATGGAGAGGGGACCTGCGAAGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp TCTCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGGTGAGTAGTCGGGGCTaGTGTAGCTACTGCCCACAG +
Preference number: 4 (lower is better)
Translates to: SLLRNWPKVLLLGSRVVRVSSRG*CSYCPQ
Trigger: CTGTGGGCAGTAGCTACAGCAGCCCCGACTACTCAC...CCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp TCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATGGGGGCTGGAGACAGTaGTACCATGGAAGCCAGTGC +
Preference number: 4 (lower is better)
Translates to: SPPKLAQSPPSGFKSGQDGGWRQ*YHGSQC
Trigger: GCACTGGCTTCCATGGTAGCACTGTCTCCAGCCCCC...ATCCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp GCAATTCACTTCCCTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCAACCTGGTAGACCCCTaGTGGGTGCCGACACAGGCT +
Preference number: 4 (lower is better)
Translates to: AIHFPLPTLHFLLSSEIGNLVDP*WVPTQA
Trigger: AGCCTGTGTCGGCACCCAGCAGGGGTCTACCAGGTT...GCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGGGAAGTGAATTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp ACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGACCGGAGGCCAGGTTaGCTTGGTGAGCCCCAGGGT +
Preference number: 4 (lower is better)
Translates to: TFFSPPKLAQSPPSGFKSDRRPG*LGEPQG
Trigger: ACCCTGGGGCTCACCAAGGCAACCTGGCCTCCGGTC...ACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp AGATCTAGATCAATGTGTGAGGATGTGGGTGCAGACACACACCCACACGACAATGACCGGAGGCCAGGTTaGCTTGGTGAGCCCCAGGGT +
Preference number: 4 (lower is better)
Translates to: RSRSMCEDVGADTHPHDNDRRPG*LGEPQG
Trigger: ACCCTGGGGCTCACCAAGGCAACCTGGCCTCCGGTC...ATTGTCGTGTGGGTGTGTGTCTGCACCCACATCCTCACACATTGATCTAGATCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp ACAGGGCGATGCCATTGCAGACCCTCCCACTCCTGCTGGGGTCTTTGTAGAAGAGGCTGGCTATTGCATTaGTATGAAGACCGGAGGCCA +
Preference number: 4 (lower is better)
Translates to: TGRCHCRPSHSCWGLCRRGWLLH*YEDRRP
Trigger: TGGCCTCCGGTCTTCATAGCAATGCAATAGCCAGCC...TCTTCTACAAAGACCCCAGCAGGAGTGGGAGGGTCTGCAATGGCATCGCCCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp TCTTCTCCCAGACCCTTTCCCATCCCAGCCCATGTTCAAGGCCAGACAGCGCTCTCCAGGGCTGGCTATTaGATTGCTATGAAGACCGGA +
Preference number: 4 (lower is better)
Translates to: SSPRPFPIPAHVQGQTALSRAGY*IAMKTG
Trigger: TCCGGTCTTCATAGCAATGCAATAGCCAGCCCTGGA...GAGCGCTGTCTGGCCTTGAACATGGGCTGGGATGGGAAAGGGTCTGGGAGAAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp CCCAGCTTGATTTCCCCTTGCAAAGCAGTTGAGTTAGGGAGACAGAGCTTTTCCGGTCCAAGCAGGGGCTaGCGGGAACCACAGATCCAG +
Preference number: 4 (lower is better)
Translates to: PSLISPCKAVELGRQSFSGPSRG*REPQIQ
Trigger: CTGGATCTGTGGTTCCCGGCAGCCCCTGCTTGGACC...GGAAAAGCTCTGTCTCCCTAACTCAACTGCTTTGCAAGGGGAAATCAAGCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp TCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATAGAAGGAGACGGTGCTaGCCCCACTGGGACTGGACA +
Preference number: 4 (lower is better)
Translates to: SPPKLAQSPPSGFKSGQDRRRRC*PHWDWT
Trigger: TGTCCAGTCCCAGTGGGGGCAGCACCGTCTCCTTCT...ATCCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp ATGTCCCACGGTGGCTCTGTTTGGTTTGACAACCTACCCCACAGGTGGCCAGAATCCCTCTCCCCACGTTaGACTTTCTTCTCTCCTCCG +
Preference number: 4 (lower is better)
Translates to: MSHGGSVWFDNLPHRWPESLSPR*TFFSPP
Trigger: CGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGGGA...TTCTGGCCACCTGTGGGGTAGGTTGTCAAACCAAACAGAGCCACCGTGGGACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp CCTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCCTCCTCCCTCTCCCCACGTTaGACTTTCTTCTCTCCTCCG +
Preference number: 4 (lower is better)
Translates to: PLPTLHFLLSSEIGPKSSSLSPR*TFFSPP
Trigger: CGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGGGA...GGAGGACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp ATGCGCACACACGTCCTGTGTTACCACTGGCCAAGGAAACGCGAGTCTCAGGATTCCCTCTCCCCACGTTaGACTTTCTTCTCTCCTCCG +
Preference number: 4 (lower is better)
Translates to: MRTHVLCYHWPRKRESQDSLSPR*TFFSPP
Trigger: CGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGGGA...ATCCTGAGACTCGCGTTTCCTTGGCCAGTGGTAACACAGGACGTGTGTGCGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp GGGGAAGACACCCCGAGCTCAACAGCTGCCTGTTCTGACAGATCTCTTCCTATGTTTCCCCCTCCCCTCTaGAATTCACTTCCCTCTCCC +
Preference number: 4 (lower is better)
Translates to: GEDTPSSTAACSDRSLPMFPPPL*NSLPSP
Trigger: GGGAGAGGGAAGTGAATTGCAGAGGGGAGGGGGAAA...CATAGGAAGAGATCTGTCAGAACAGGCAGCTGTTGAGCTCGGGGTGTCTTCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp GTAGAAGAGAAGGGTCTGGCGGCACCCAGGGTCACTAGAGTGCAGGTGCAGGCAGAGGCTTTGGGTTTTTaGAGTTTCCATCTACCCAGG +
Preference number: 4 (lower is better)
Translates to: VEEKGLAAPRVTRVQVQAEALGF*SFHLPR
Trigger: CCTGGGTAGATGGAAACTGCAAAAACCCAAAGCCTC...TGCCTGCACCTGCACTCTAGTGACCCTGGGTGCCGCCAGACCCTTCTCTTCTAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp TTCCTTCGCAGGTCCCCTCTCCATTGTTTTCTCGCCCAATCCTTCCCTCTTGCTTGTTTGTCCCTCCCCTaGTGCACTGCCACCACCAAC +
Preference number: 4 (lower is better)
Translates to: FLRRSPLHCFLAQSFPLACLSLP*CTATTN
Trigger: GTTGGTGGTGGCAGTGCAGCAGGGGAGGGACAAACA...AGCAAGAGGGAAGGATTGGGCGAGAAAACAATGGAGAGGGGACCTGCGAAGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp CCAGAACACCGTGATAGCAGGCTGATCAAACCGCTCACTTCCTCCCTGTTTTCCTGTTTGTCCCTCCCCTaGTGCACTGCCACCACCAAC +
Preference number: 4 (lower is better)
Translates to: PEHRDSRLIKPLTSSLFSCLSLP*CTATTN
Trigger: GTTGGTGGTGGCAGTGCAGCAGGGGAGGGACAAACA...GGAAAACAGGGAGGAAGTGAGCGGTTTGATCAGCCTGCTATCACGGTGTTCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp CTTCCCTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCTCACTAGAGTGCAGGTaGAGGCACCAGGAGAGAGCC +
Preference number: 4 (lower is better)
Translates to: LPSPHVALSSLLRNWPKVSLECR*RHQERA
Trigger: GGCTCTCTCCTGGTGCCTGCACCTGCACTCTAGTGA...GACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp GCAATTCACTTCCCTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCAAGCCTTCTGCCCTCTaGTGCATGGGCAGCGTGGCT +
Preference number: 4 (lower is better)
Translates to: AIHFPLPTLHFLLSSEIGKPSAL*CMGSVA
Trigger: AGCCACGCTGCCCATGCAGCAGAGGGCAGAAGGCTT...GCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGGGAAGTGAATTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp TCTCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGCAAGTGCAAGCCTTCTaGCCTCTGCTGCATGGGCAG +
Preference number: 4 (lower is better)
Translates to: SLLRNWPKVLLLGSRVVRQVQAF*PLLHGQ
Trigger: CTGCCCATGCAGCAGAGGGCAGAAGGCTTGCACTTG...CCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp CTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCATGCTGCTCTGGGACTCTaGCCCCCAACCTCTTGGAGG +
Preference number: 4 (lower is better)
Translates to: LRNWPKVLLLGSRVVRIHAALGL*PPTSWR
Trigger: CCTCCAAGAGGTTGGGGGGCAGAGTCCCAGAGCAGC...ATGAATCCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp AGATCTAGATCAATGTGTGAGGATGTGGGTGCAGACACACACCCACACGACAATCAAGAGGGACAGATCTaGCCGAGGCCCCCACCCTGC +
Preference number: 4 (lower is better)
Translates to: RSRSMCEDVGADTHPHDNQEGQI*PRPPPC
Trigger: GCAGGGTGGGGGCCTCGGGCAGATCTGTCCCTCTTG...ATTGTCGTGTGGGTGTGTGTCTGCACCCACATCCTCACACATTGATCTAGATCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp CCTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCCTCCTGGGGTGGGGAAGGATaGTGGGTGATCTTGTTTCCC +
Preference number: 4 (lower is better)
Translates to: PLPTLHFLLSSEIGPKSSWGGEG*WVILFP
Trigger: GGGAAACAAGATCACCCAGCATCCTTCCCCACCCCA...GGAGGACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp TCTGCAATTCACTTCCCTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATTGATCCTCTGGCTGGCTaGGGAGGCAGAAGCGCAGGG +
Preference number: 4 (lower is better)
Translates to: SAIHFPLPTLHFLLSSEIDPLAG*GGRSAG
Trigger: CCCTGCGCTTCTGCCTCCGCAGCCAGCCAGAGGATC...AATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGGGAAGTGAATTGCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646520.1
CDS-3UTR CCA 90 bp GGGGAAGACACCCCGAGCTCAACAGCTGCCTGTTCTGACAGATCTCTTCCTATGATGGGCACCAGCTCATaGTTGGATGGAGGAACGCAG +
Preference number: 4 (lower is better)
Translates to: GEDTPSSTAACSDRSLPMMGTSS*LDGGTQ
Trigger: CTGCGTTCCTCCATCCAACCATGAGCTGGTGCCCAT...CATAGGAAGAGATCTGTCAGAACAGGCAGCTGTTGAGCTCGGGGTGTCTTCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TCTGCAATTCACTTCCCTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATTCTGATGGGCTGGAGGTaGGGCTGGACACTCGGGGTG +
Preference number: 4 (lower is better)
Translates to: SAIHFPLPTLHFLLSSEILMGWR*GWTLGV
Trigger: CACCCCGAGTGTCCAGCCCCACCTCCAGCCCATCAG...AATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGGGAAGTGAATTGCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp CCTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCCTCCCACAGCTGTCCTCCATaGTCCGGCTCACACTCATGT +
Preference number: 4 (lower is better)
Translates to: PLPTLHFLLSSEIGPKSSHSCPP*SGSHSC
Trigger: ACATGAGTGTGAGCCGGACCATGGAGGACAGCTGTG...GGAGGACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp GTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCATGGGTCCCCTCCCCACAAGGGAAGTTCTCCTCATTaGCTGTGCTGGGGAAGGAGA +
Preference number: 4 (lower is better)
Translates to: VLLLGSRVVRIHGSPPHKGSSPH*LCWGRR
Trigger: TCTCCTTCCCCAGCACAGCCAATGAGGAGAACTTCC...CTTGTGGGGAGGGGACCCATGAATCCTGACCACTCTTGAACCCAGAAGGAGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp CACATGCGCACACACGTCCTGTGTTACCACTGGCCAAGGAAACGCGAGTCTCAGGGAAGTTCTCCTCATTaGCTGTGCTGGGGAAGGAGA +
Preference number: 4 (lower is better)
Translates to: HMRTHVLCYHWPRKRESQGSSPH*LCWGRR
Trigger: TCTCCTTCCCCAGCACAGCCAATGAGGAGAACTTCC...CTGAGACTCGCGTTTCCTTGGCCAGTGGTAACACAGGACGTGTGTGCGCATGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp ATGTCCCACGGTGGCTCTGTTTGGTTTGACAACCTACCCCACAGGTGGCCAGAATGCACGTACCTTCTTTaGGATGGCTGGCCAATGGGC +
Preference number: 4 (lower is better)
Translates to: MSHGGSVWFDNLPHRWPECTYLL*DGWPMG
Trigger: GCCCATTGGCCAGCCATCCCAAAGAAGGTACGTGCA...TTCTGGCCACCTGTGGGGTAGGTTGTCAAACCAAACAGAGCCACCGTGGGACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp GTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCATGGGTCCCCTCCCCACAAGATGCAGACGCTAGTCTaGCTGTCTCCTGGGATGTTG +
Preference number: 4 (lower is better)
Translates to: VLLLGSRVVRIHGSPPHKMQTLV*LSPGML
Trigger: CAACATCCCAGGAGACAGCCAGACTAGCGTCTGCAT...CTTGTGGGGAGGGGACCCATGAATCCTGACCACTCTTGAACCCAGAAGGAGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp ATGTCCCACGGTGGCTCTGTTTGGTTTGACAACCTACCCCACAGGTGGCCAGAAGATGACGTCTCGGGCTaGGCTTCGGAACTTCTTGTG +
Preference number: 4 (lower is better)
Translates to: MSHGGSVWFDNLPHRWPEDDVSG*ASELLV
Trigger: CACAAGAAGTTCCGAAGCCCAGCCCGAGACGTCATC...TTCTGGCCACCTGTGGGGTAGGTTGTCAAACCAAACAGAGCCACCGTGGGACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TCTCCTGGCCAGTCTCAGAAGACCCAGGGATCCTCAAAAACCAGGGGAGAAGGAGATGACGTCTCGGGCTaGGCTTCGGAACTTCTTGTG +
Preference number: 4 (lower is better)
Translates to: SPGQSQKTQGSSKTRGEGDDVSG*ASELLV
Trigger: CACAAGAAGTTCCGAAGCCCAGCCCGAGACGTCATC...TCCTTCTCCCCTGGTTTTTGAGGATCCCTGGGTCTTCTGAGACTGGCCAGGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp GTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCATGGGTCCCCTCCCCACAAGTGGATGGCACAGGTGTaGAACTGCACACGGAAGATG +
Preference number: 4 (lower is better)
Translates to: VLLLGSRVVRIHGSPPHKWMAQV*NCTRKM
Trigger: CATCTTCCGTGTGCAGTTCCACACCTGTGCCATCCA...CTTGTGGGGAGGGGACCCATGAATCCTGACCACTCTTGAACCCAGAAGGAGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TTCCTTCGCAGGTCCCCTCTCCATTGTTTTCTCGCCCAATCCTTCCCTCTTGCTCCCCCAGGTCATGGATaGCACAGGTGTGGAACTGCA +
Preference number: 4 (lower is better)
Translates to: FLRRSPLHCFLAQSFPLAPPGHG*HRCGTA
Trigger: TGCAGTTCCACACCTGTGCCATCCATGACCTGGGGG...AGCAAGAGGGAAGGATTGGGCGAGAAAACAATGGAGAGGGGACCTGCGAAGGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp CCTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCCTCCACAACCCCCAGGTCATaGATGGCACAGGTGTGGAAC +
Preference number: 4 (lower is better)
Translates to: PLPTLHFLLSSEIGPKSSTTPRS*MAQVWN
Trigger: GTTCCACACCTGTGCCATCCATGACCTGGGGGTTGT...GGAGGACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp AATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCATGGGTCCAGCGTGTGTTCCACGTaGTTGGGGGTGGCCGACAGT +
Preference number: 4 (lower is better)
Translates to: NWPKVLLLGSRVVRIHGSSVCST*LGVADS
Trigger: ACTGTCGGCCACCCCCAACCACGTGGAACACACGCT...GGACCCATGAATCCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TTCCTTCGCAGGTCCCCTCTCCATTGTTTTCTCGCCCAATCCTTCCCTCTTGCTTCTTGTCGGTCTTGGTaGAGGCTGTGGAGTTGCCCG +
Preference number: 4 (lower is better)
Translates to: FLRRSPLHCFLAQSFPLASCRSW*RLWSCP
Trigger: CGGGCAACTCCACAGCCTCCACCAAGACCGACAAGA...AGCAAGAGGGAAGGATTGGGCGAGAAAACAATGGAGAGGGGACCTGCGAAGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp CCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTCTTGTCGGTCTTGGTaGAGGCTGTGGAGTTGCCCG +
Preference number: 4 (lower is better)
Translates to: PRCTFFSPPKLAQSPPSGSCRSW*RLWSCP
Trigger: CGGGCAACTCCACAGCCTCCACCAAGACCGACAAGA...CCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp CTTCCCTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCCGGTCTTGTCGGTCTTaGTGGAGGCTGTGGAGTTGC +
Preference number: 4 (lower is better)
Translates to: LPSPHVALSSLLRNWPKVRSCRS*WRLWSC
Trigger: GCAACTCCACAGCCTCCACCAAGACCGACAAGACCG...GACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp CTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCATCGGGACCTGAGGTGCTaGGTGTGGTACATGGCGCCT +
Preference number: 4 (lower is better)
Translates to: LRNWPKVLLLGSRVVRIHRDLRC*VWYMAP
Trigger: AGGCGCCATGTACCACACCCAGCACCTCAGGTCCCG...ATGAATCCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp AGGTGCCTTGGGTCTGAGATACTTTCAAGCAAACAAGTTCTTCCACTTGATGTCAGCCGAGCCCCCTGCTaGGCGGGACCTGAGGTGCTG +
Preference number: 4 (lower is better)
Translates to: RCLGSEILSSKQVLPLDVSRAPC*AGPEVL
Trigger: CAGCACCTCAGGTCCCGCCCAGCAGGGGGCTCGGCT...GACATCAAGTGGAAGAACTTGTTTGCTTGAAAGTATCTCAGACCCAAGGCACCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp GTAGAAGAGAAGGGTCTGGCGGCACCCAGGGTCACTAGAGTGCAGGTGCAGGCAGTGACCATCCTGGTTTaGCAATTCATCGTCCAGGAT +
Preference number: 4 (lower is better)
Translates to: VEEKGLAAPRVTRVQVQAVTILV*QFIVQD
Trigger: ATCCTGGACGATGAATTGCCAAACCAGGATGGTCAC...TGCCTGCACCTGCACTCTAGTGACCCTGGGTGCCGCCAGACCCTTCTCTTCTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp GCAATTCACTTCCCTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCCAGACCGTTGGTCAGTaGGGACAGGGCCTCTGGGTA +
Preference number: 4 (lower is better)
Translates to: AIHFPLPTLHFLLSSEIGQTVGQ*GQGLWV
Trigger: TACCCAGAGGCCCTGTCCCCACTGACCAACGGTCTG...GCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGGGAAGTGAATTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTCTCCTCCATCTTTCCAGGCCCCGCCCGGCTaGCAGACTCGTAGGGGTAGC +
Preference number: 4 (lower is better)
Translates to: FLQFPSTQGNPSSSPPSFQAPPG*QTRRGS
Trigger: GCTACCCCTACGAGTCTGCCAGCCGGGCGGGGCCTG...GAAAGATGGAGGAGAAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp CTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCATGGGCATAGTGGGAGGTaGTCACTGGCTGTGGCCAGG +
Preference number: 4 (lower is better)
Translates to: LRNWPKVLLLGSRVVRIHGHSGR*SLAVAR
Trigger: CCTGGCCACAGCCAGTGACCACCTCCCACTATGCCC...ATGAATCCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TCTAGATCAATGTGTGAGGATGTGGGTGCAGACACACACCCACACGACAATATACTGCTGGCGTGGAGGTaGGCGAGGCTGCTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: SRSMCEDVGADTHPHDNILLAWR*ARLLLL
Trigger: CAGCAGCAGCAGCCTCGCCCACCTCCACGCCAGCAG...TATATTGTCGTGTGGGTGTGTGTCTGCACCCACATCCTCACACATTGATCTAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TTGGGTTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTCTCCTCCATCTGCTGGCGTGGAGGTaGGCGAGGCTGCTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: LGFCSFHLPRGIQVLLLHLLAWR*ARLLLL
Trigger: CAGCAGCAGCAGCCTCGCCCACCTCCACGCCAGCAG...ATGGAGGAGAAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAACCCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp CTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCATTCTTTCCTGCTGGCGTaGAGGTGGGCGAGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: LRNWPKVLLLGSRVVRIHSFLLA*RWARLL
Trigger: CAGCAGCCTCGCCCACCTCCACGCCAGCAGGAAAGA...ATGAATCCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TCTGCAATTCACTTCCCTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATTTGGGCTCTTTCCTGCTaGCGTGGAGGTGGGCGAGGC +
Preference number: 4 (lower is better)
Translates to: SAIHFPLPTLHFLLSSEIWALSC*RGGGRG
Trigger: GCCTCGCCCACCTCCACGCCAGCAGGAAAGAGCCCA...AATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGGGAAGTGAATTGCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp CTTCCCTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCGAGGGCTGGGCCTGCTaGCTACAAGACTCTCCAAGT +
Preference number: 4 (lower is better)
Translates to: LPSPHVALSSLLRNWPKVEGWAC*LQDSPS
Trigger: ACTTGGAGAGTCTTGTAGCCAGCAGGCCCAGCCCTC...GACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TCTGCAATTCACTTCCCTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCAGCAGCGGAGGCTaGCTCCAGGTCCAGCATCAG +
Preference number: 4 (lower is better)
Translates to: SAIHFPLPTLHFLLSSEIGSSGG*LQVQHQ
Trigger: CTGATGCTGGACCTGGAGCCAGCCTCCGCTGCTGCC...AATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGGGAAGTGAATTGCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TGCAGGCACCAGGAGAGAGCCTCTGTCACCCATAGCTTGGTTGTTTGTCCCTCCGGATATAGCCAGATCTaGACTGGGTCAGTGGATGGG +
Preference number: 4 (lower is better)
Translates to: CRHQERASVTHSLVVCPSGYSQI*TGSVDG
Trigger: CCCATCCACTGACCCAGTCCAGATCTGGCTATATCC...GGAGGGACAAACAACCAAGCTATGGGTGACAGAGGCTCTCTCCTGGTGCCTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TCTGCAATTCACTTCCCTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATTAGAGGCCCGTGGGGCTaGCTCAGGGGTTCCCAACGA +
Preference number: 4 (lower is better)
Translates to: SAIHFPLPTLHFLLSSEIRGPWG*LRGSQR
Trigger: TCGTTGGGAACCCCTGAGCCAGCCCCACGGGCCTCT...AATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGGGAAGTGAATTGCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp GAGAAGGGTCTGGCGGCACCCAGGGTCACTAGAGTGCAGGTGCAGGCACCAGGATTTGAATGGAAATCCTaGTTAGGCCCAGCCAAACAT +
Preference number: 4 (lower is better)
Translates to: EKGLAAPRVTRVQVQAPGFEWKS*LGPAKH
Trigger: ATGTTTGGCTGGGCCTAACCAGGATTTCCATTCAAA...TCCTGGTGCCTGCACCTGCACTCTAGTGACCCTGGGTGCCGCCAGACCCTTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp GATCTAGATCAATGTGTGAGGATGTGGGTGCAGACACACACCCACACGACAATAGGCCCTGGAGGGCTGTaGGTGGTCGGAAGGAAGGCA +
Preference number: 4 (lower is better)
Translates to: DLDQCVRMWVQTHTHTTIGPGGL*VVGRKA
Trigger: TGCCTTCCTTCCGACCACCCACAGCCCTCCAGGGCC...TATTGTCGTGTGGGTGTGTGTCTGCACCCACATCCTCACACATTGATCTAGATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TTGATTTCCCCTTGCAAAGCAGTTGAGTTAGGGAGACAGAGCTTTTCCATTCCCCCTCCGCAGAGGGGCTaGGGGCTCTGCAGGCTGCTT +
Preference number: 4 (lower is better)
Translates to: LISPCKAVELGRQSFSIPPPQRG*GLCRLL
Trigger: AAGCAGCCTGCAGAGCCCCCAGCCCCTCTGCGGAGG...GGGAATGGAAAAGCTCTGTCTCCCTAACTCAACTGCTTTGCAAGGGGAAATCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TCTAGATCAATGTGTGAGGATGTGGGTGCAGACACACACCCACACGACAATATACCTCCGCAGAGGGGCTaGGGGCTCTGCAGGCTGCTT +
Preference number: 4 (lower is better)
Translates to: SRSMCEDVGADTHPHDNIPPQRG*GLCRLL
Trigger: AAGCAGCCTGCAGAGCCCCCAGCCCCTCTGCGGAGG...TATATTGTCGTGTGGGTGTGTGTCTGCACCCACATCCTCACACATTGATCTAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp CCCAGCTTGATTTCCCCTTGCAAAGCAGTTGAGTTAGGGAGACAGAGCTTTTCCCATACTGTCCATCACTaGCCGCCCGCCTCCGCAGAG +
Preference number: 4 (lower is better)
Translates to: PSLISPCKAVELGRQSFSHTVHH*PPASAE
Trigger: CTCTGCGGAGGCGGGCGGCCAGTGATGGACAGTATG...GGAAAAGCTCTGTCTCCCTAACTCAACTGCTTTGCAAGGGGAAATCAAGCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TGGTCAGGTGTTTTCCCAACTGTCCAGTGGACCTTAGGCCCTTTGGCCCAAGTGGGCTACGAGGGGATGTaGCTTCTGGAGACTGGTTCT +
Preference number: 4 (lower is better)
Translates to: WSGVFPTVQWTLGPLAQVGYEGM*LLETGS
Trigger: AGAACCAGTCTCCAGAAGCCACATCCCCTCGTAGCC...CACTTGGGCCAAAGGGCCTAAGGTCCACTGGACAGTTGGGAAAACACCTGACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp GGGGAAGACACCCCGAGCTCAACAGCTGCCTGTTCTGACAGATCTCTTCCTATGGGCTACGAGGGGATGTaGCTTCTGGAGACTGGTTCT +
Preference number: 4 (lower is better)
Translates to: GEDTPSSTAACSDRSLPMGYEGM*LLETGS
Trigger: AGAACCAGTCTCCAGAAGCCACATCCCCTCGTAGCC...CATAGGAAGAGATCTGTCAGAACAGGCAGCTGTTGAGCTCGGGGTGTCTTCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp AGGTGCCTTGGGTCTGAGATACTTTCAAGCAAACAAGTTCTTCCACTTGATGTCCCGCACCCCACTGGGTaGTGGGCTGCTCGGGGAGGT +
Preference number: 4 (lower is better)
Translates to: RCLGSEILSSKQVLPLDVPHPTG*WAARGG
Trigger: ACCTCCCCGAGCAGCCCACCACCCAGTGGGGTGCGG...GACATCAAGTGGAAGAACTTGTTTGCTTGAAAGTATCTCAGACCCAAGGCACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TCTCCTGGCCAGTCTCAGAAGACCCAGGGATCCTCAAAAACCAGGGGAGAAGGAATAGGCCTGGGTGGCTaGAGCACTAAAGCTCTTGGG +
Preference number: 4 (lower is better)
Translates to: SPGQSQKTQGSSKTRGEGIGLGG*STKALG
Trigger: CCCAAGAGCTTTAGTGCTCCAGCCACCCAGGCCTAT...TCCTTCTCCCCTGGTTTTTGAGGATCCCTGGGTCTTCTGAGACTGGCCAGGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp GGGGAAGACACCCCGAGCTCAACAGCTGCCTGTTCTGACAGATCTCTTCCTATGATAGGCCTGGGTGGCTaGAGCACTAAAGCTCTTGGG +
Preference number: 4 (lower is better)
Translates to: GEDTPSSTAACSDRSLPMIGLGG*STKALG
Trigger: CCCAAGAGCTTTAGTGCTCCAGCCACCCAGGCCTAT...CATAGGAAGAGATCTGTCAGAACAGGCAGCTGTTGAGCTCGGGGTGTCTTCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TCTAGATCAATGTGTGAGGATGTGGGTGCAGACACACACCCACACGACAATATACCAACAGAGGCTGGGTaGGCGTCCGGGGACCCTGGT +
Preference number: 4 (lower is better)
Translates to: SRSMCEDVGADTHPHDNIPTEAG*ASGDPG
Trigger: ACCAGGGTCCCCGGACGCCCACCCAGCCTCTGTTGG...TATATTGTCGTGTGGGTGTGTGTCTGCACCCACATCCTCACACATTGATCTAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TCTAGATCAATGTGTGAGGATGTGGGTGCAGACACACACCCACACGACAATATAGACTCCAACAGAGGCTaGGTGGGCGTCCGGGGACCC +
Preference number: 4 (lower is better)
Translates to: SRSMCEDVGADTHPHDNIDSNRG*VGVRGP
Trigger: GGGTCCCCGGACGCCCACCCAGCCTCTGTTGGAGTC...TATATTGTCGTGTGGGTGTGTGTCTGCACCCACATCCTCACACATTGATCTAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp AATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCATGGGTCCGGTGATGGCTCAAACTaGGACTGCTGGGGGCAGCCA +
Preference number: 4 (lower is better)
Translates to: NWPKVLLLGSRVVRIHGSGDGSN*DCWGQP
Trigger: TGGCTGCCCCCAGCAGTCCCAGTTTGAGCCATCACC...GGACCCATGAATCCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp ATGTCCCACGGTGGCTCTGTTTGGTTTGACAACCTACCCCACAGGTGGCCAGAAATGGAAGCCAGTGCCTaGTGGACCCATCATCTGGTG +
Preference number: 4 (lower is better)
Translates to: MSHGGSVWFDNLPHRWPEMEASA*WTHHLV
Trigger: CACCAGATGATGGGTCCACCAGGCACTGGCTTCCAT...TTCTGGCCACCTGTGGGGTAGGTTGTCAAACCAAACAGAGCCACCGTGGGACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp CCTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCCTCCATGGAAGCCAGTGCCTaGTGGACCCATCATCTGGTG +
Preference number: 4 (lower is better)
Translates to: PLPTLHFLLSSEIGPKSSMEASA*WTHHLV
Trigger: CACCAGATGATGGGTCCACCAGGCACTGGCTTCCAT...GGAGGACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp CCTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCCTCCGAGACAGTGCTACCATaGAAGCCAGTGCCTGGTGGA +
Preference number: 4 (lower is better)
Translates to: PLPTLHFLLSSEIGPKSSETVLP*KPVPGG
Trigger: TCCACCAGGCACTGGCTTCCATGGTAGCACTGTCTC...GGAGGACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp GCAATTCACTTCCCTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCGTCGCTGCACTGCTCTaGGGGCTGGAGACAGTGCTA +
Preference number: 4 (lower is better)
Translates to: AIHFPLPTLHFLLSSEIGVAALL*GLETVL
Trigger: TAGCACTGTCTCCAGCCCCCAGAGCAGTGCAGCGAC...GCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGGGAAGTGAATTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TCTGCAATTCACTTCCCTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATTCTGGTAGACCCCTGCTaGGTGCCGACACAGGCTGGG +
Preference number: 4 (lower is better)
Translates to: SAIHFPLPTLHFLLSSEILVDPC*VPTQAG
Trigger: CCCAGCCTGTGTCGGCACCCAGCAGGGGTCTACCAG...AATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGGGAAGTGAATTGCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp CCCAGCTTGATTTCCCCTTGCAAAGCAGTTGAGTTAGGGAGACAGAGCTTTTCCCAGGGAAGGAGGGCGTaGAAGGAGCCTGGTAGCCAG +
Preference number: 4 (lower is better)
Translates to: PSLISPCKAVELGRQSFSQGRRA*KEPGSQ
Trigger: CTGGCTACCAGGCTCCTTCCACGCCCTCCTTCCCTG...GGAAAAGCTCTGTCTCCCTAACTCAACTGCTTTGCAAGGGGAAATCAAGCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp CTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCATCAGGGAAGGAGGGCGTaGAAGGAGCCTGGTAGCCAG +
Preference number: 4 (lower is better)
Translates to: LRNWPKVLLLGSRVVRIHQGRRA*KEPGSQ
Trigger: CTGGCTACCAGGCTCCTTCCACGCCCTCCTTCCCTG...ATGAATCCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp ATGTCCCACGGTGGCTCTGTTTGGTTTGACAACCTACCCCACAGGTGGCCAGAACATCCTTCGCTTCTCTaGCAAGGCTGGTGTTGGGCT +
Preference number: 4 (lower is better)
Translates to: MSHGGSVWFDNLPHRWPEHPSLL*QGWCWA
Trigger: AGCCCAACACCAGCCTTGCCAGAGAAGCGAAGGATG...TTCTGGCCACCTGTGGGGTAGGTTGTCAAACCAAACAGAGCCACCGTGGGACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp GATCTAGATCAATGTGTGAGGATGTGGGTGCAGACACACACCCACACGACAATATGCCCCCACTGGGACTaGACATGCCGCTGGCGACAG +
Preference number: 4 (lower is better)
Translates to: DLDQCVRMWVQTHTHTTICPHWD*TCRWRQ
Trigger: CTGTCGCCAGCGGCATGTCCAGTCCCAGTGGGGGCA...TATTGTCGTGTGGGTGTGTGTCTGCACCCACATCCTCACACATTGATCTAGATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TCTCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGAAGTCGGGCAGAGTGTaGGAGAAGGAGACGGTGCTG +
Preference number: 4 (lower is better)
Translates to: SLLRNWPKVLLLGSRVVRKSGRV*EKETVL
Trigger: CAGCACCGTCTCCTTCTCCCACACTCTGCCCGACTT...CCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TGCAGGCACCAGGAGAGAGCCTCTGTCACCCATAGCTTGGTTGTTTGTCCCTCCCTGGCATGGAGTACTTaGAGAAGTCGGGCAGAGTGT +
Preference number: 4 (lower is better)
Translates to: CRHQERASVTHSLVVCPSLAWST*RSRAEC
Trigger: ACACTCTGCCCGACTTCTCCAAGTACTCCATGCCAG...GGAGGGACAAACAACCAAGCTATGGGTGACAGAGGCTCTCTCCTGGTGCCTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp ACAGGGCGATGCCATTGCAGACCCTCCCACTCCTGCTGGGGTCTTTGTAGAAGACTCCGGGCTGTTGTCTaGCATGGAGTACTTGGAGAA +
Preference number: 4 (lower is better)
Translates to: TGRCHCRPSHSCWGLCRRLRAVV*HGVLGE
Trigger: TTCTCCAAGTACTCCATGCCAGACAACAGCCCGGAG...TCTTCTACAAAGACCCCAGCAGGAGTGGGAGGGTCTGCAATGGCATCGCCCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp CGATGCCATTGCAGACCCTCCCACTCCTGCTGGGGTCTTTGTAGAAGAGAAGGGCTCCGGGCTGTTGTCTaGCATGGAGTACTTGGAGAA +
Preference number: 4 (lower is better)
Translates to: RCHCRPSHSCWGLCRREGLRAVV*HGVLGE
Trigger: TTCTCCAAGTACTCCATGCCAGACAACAGCCCGGAG...CCCTTCTCTTCTACAAAGACCCCAGCAGGAGTGGGAGGGTCTGCAATGGCATCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TCTCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGCGATGGCCTGCTCCCTaGAGATCTCAGGCTTGTACC +
Preference number: 4 (lower is better)
Translates to: SLLRNWPKVLLLGSRVVRRWPAP*RSQACT
Trigger: GGTACAAGCCTGAGATCTCCAGGGAGCAGGCCATCG...CCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp CTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCATGCGAAGACACCTTCATaGCCAGCCCGTACGCGCCTC +
Preference number: 4 (lower is better)
Translates to: LRNWPKVLLLGSRVVRIHAKTPS*PARTRL
Trigger: GAGGCGCGTACGGGCTGGCCATGAAGGTGTCTTCGC...ATGAATCCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp ACAGGGCGATGCCATTGCAGACCCTCCCACTCCTGCTGGGGTCTTTGTAGAAGACTGCTGCATGATGGTTaGAGGTGGCGAAGACACCTT +
Preference number: 4 (lower is better)
Translates to: TGRCHCRPSHSCWGLCRRLLHDG*RWRRHL
Trigger: AAGGTGTCTTCGCCACCTCCAACCATCATGCAGCAG...TCTTCTACAAAGACCCCAGCAGGAGTGGGAGGGTCTGCAATGGCATCGCCCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp CCTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCCTCCCAGCGATCCGAAGTTTaGCTCATTGGGGCAGCCCTT +
Preference number: 4 (lower is better)
Translates to: PLPTLHFLLSSEIGPKSSQRSEV*LIGAAL
Trigger: AAGGGCTGCCCCAATGAGCCAAACTTCGGATCGCTG...GGAGGACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATAACGATGGTGGCAGCTaGCGTGGGGTCTGCAGCCAA +
Preference number: 4 (lower is better)
Translates to: SPPKLAQSPPSGFKSGQDNDGGS*RGVCSQ
Trigger: TTGGCTGCAGACCCCACGCCAGCTGCCACCATCGTT...ATCCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp CTTCCCTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCAGCTCAGCAAAGAGGTaGCAGGCGTTGTCCGTGGTG +
Preference number: 4 (lower is better)
Translates to: LPSPHVALSSLLRNWPKVSSAKR*QALSVV
Trigger: CACCACGGACAACGCCTGCCACCTCTTTGCTGAGCT...GACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp AATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCATGGGTCCATGGCAGAGGCCGGCTaGTTGGGGTCAAGCTCAGCA +
Preference number: 4 (lower is better)
Translates to: NWPKVLLLGSRVVRIHGSMAEAG*LGSSSA
Trigger: TGCTGAGCTTGACCCCAACCAGCCGGCCTCTGCCAT...GGACCCATGAATCCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp GCTATCGCTGAGACTCCACCAATTGGTTGGCCTACAGGCCTCACCTCCCGACTCCCAAAGTCCTCCTTCTaGGTTCAAGAGTGGTCAGGA +
Preference number: 4 (lower is better)
Translates to: AIAETPPIGWPTGLTSRLPKSSF*VQEWSG
Trigger: TCCTGACCACTCTTGAACCCAGAAGGAGGACTTTGG...GAGTCGGGAGGTGAGGCCTGTAGGCCAACCAATTGGTGGAGTCTCAGCGATAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp ACAGGGCGATGCCATTGCAGACCCTCCCACTCCTGCTGGGGTCTTTGTAGAAGAGGAGGGGGTGTTAGGTaGACCTGGTTAGTTTTGGAG +
Preference number: 4 (lower is better)
Translates to: TGRCHCRPSHSCWGLCRRGGGVR*TWLVLE
Trigger: CTCCAAAACTAACCAGGTCCACCTAACACCCCCTCC...TCTTCTACAAAGACCCCAGCAGGAGTGGGAGGGTCTGCAATGGCATCGCCCTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp CGATGCCATTGCAGACCCTCCCACTCCTGCTGGGGTCTTTGTAGAAGAGAAGGGGGAGGGGGTGTTAGGTaGACCTGGTTAGTTTTGGAG +
Preference number: 4 (lower is better)
Translates to: RCHCRPSHSCWGLCRREGGGGVR*TWLVLE
Trigger: CTCCAAAACTAACCAGGTCCACCTAACACCCCCTCC...CCCTTCTCTTCTACAAAGACCCCAGCAGGAGTGGGAGGGTCTGCAATGGCATCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TCTGCCCTCTGCTGCATGGGCAGCGTGGCTCAGCTAGGGAAACCAAGGCAGAAAAACCTACCCCACAGGTaGCCAGAAAAAGATTCTCCC +
Preference number: 4 (lower is better)
Translates to: SALCCMGSVAQLGKPRQKNLPHR*PEKDSP
Trigger: GGGAGAATCTTTTTCTGGCCACCTGTGGGGTAGGTT...TTTCTGCCTTGGTTTCCCTAGCTGAGCCACGCTGCCCATGCAGCAGAGGGCAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp ACAGGGCGATGCCATTGCAGACCCTCCCACTCCTGCTGGGGTCTTTGTAGAAGACACGGTGGCTCTGTTTaGTTTGACAACCTACCCCAC +
Preference number: 4 (lower is better)
Translates to: TGRCHCRPSHSCWGLCRRHGGSV*FDNLPH
Trigger: GTGGGGTAGGTTGTCAAACCAAACAGAGCCACCGTG...TCTTCTACAAAGACCCCAGCAGGAGTGGGAGGGTCTGCAATGGCATCGCCCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp GGCTTCTGGCCAAGGCAGGACAGGGCGATGCCATTGCAGACCCTCCCACTCCTGCTTAGAGTCCTTAAATaGTGGTCAGGTGTTTTCCCA +
Preference number: 4 (lower is better)
Translates to: GFWPRQDRAMPLQTLPLLLRVLK*WSGVFP
Trigger: TGGGAAAACACCTGACCACCATTTAAGGACTCTAAG...CAGGAGTGGGAGGGTCTGCAATGGCATCGCCCTGTCCTGCCTTGGCCAGAAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp GGGCGATGCCATTGCAGACCCTCCCACTCCTGCTGGGGTCTTTGTAGAAGAGAAAGGGCAAGGAGACCCTaGCTGCTTCAAGAACAAAGG +
Preference number: 4 (lower is better)
Translates to: GRCHCRPSHSCWGLCRRERARRP*LLQEQR
Trigger: CCTTTGTTCTTGAAGCAGCCAGGGTCTCCTTGCCCT...TTCTCTTCTACAAAGACCCCAGCAGGAGTGGGAGGGTCTGCAATGGCATCGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp AGATCTAGATCAATGTGTGAGGATGTGGGTGCAGACACACACCCACACGACAATCCGCAGGGGCACACATaGCTCAGGCTGGAGTGGAGG +
Preference number: 4 (lower is better)
Translates to: RSRSMCEDVGADTHPHDNPQGHT*LRLEWR
Trigger: CCTCCACTCCAGCCTGAGCCATGTGTGCCCCTGCGG...ATTGTCGTGTGGGTGTGTGTCTGCACCCACATCCTCACACATTGATCTAGATCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATGGCCACTGTGGGGACTaGGGAACCCTTCCCCATCAT +
Preference number: 4 (lower is better)
Translates to: SPPKLAQSPPSGFKSGQDGHCGD*GTLPHH
Trigger: ATGATGGGGAAGGGTTCCCCAGTCCCCACAGTGGCC...ATCCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp AATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCATGGGTCCACCCAGCTGGACAGCTaGTGGCAGCACGGGACTGAA +
Preference number: 4 (lower is better)
Translates to: NWPKVLLLGSRVVRIHGSTQLDS*WQHGTE
Trigger: TTCAGTCCCGTGCTGCCACCAGCTGTCCAGCTGGGT...GGACCCATGAATCCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp GTACAGGAGTGGGGACGCGTCAGTGTACAATACATTCATGTCCAGGATAAGGAGCCCTTCTGTGCCCCCTaGACAGCATGCTCCCCTGGA +
Preference number: 4 (lower is better)
Translates to: VQEWGRVSVQYIHVQDKEPFCAP*TACSPG
Trigger: TCCAGGGGAGCATGCTGTCCAGGGGGCACAGAAGGG...CTCCTTATCCTGGACATGAATGTATTGTACACTGACGCGTCCCCACTCCTGTAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp GTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCATGGGTCCCCTCCCCACAAGGTCCTGTGTTACCACTaGCCAAGGAAACGCGAGTCT +
Preference number: 4 (lower is better)
Translates to: VLLLGSRVVRIHGSPPHKVLCYH*PRKRES
Trigger: AGACTCGCGTTTCCTTGGCCAGTGGTAACACAGGAC...CTTGTGGGGAGGGGACCCATGAATCCTGACCACTCTTGAACCCAGAAGGAGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp CCCAGCTTGATTTCCCCTTGCAAAGCAGTTGAGTTAGGGAGACAGAGCTTTTCCTCCTGGGTGATGACCTaGCGGCAGATCCCACAGGGC +
Preference number: 4 (lower is better)
Translates to: PSLISPCKAVELGRQSFSSWVMT*RQIPQG
Trigger: GCCCTGTGGGATCTGCCGCCAGGTCATCACCCAGGA...GGAAAAGCTCTGTCTCCCTAACTCAACTGCTTTGCAAGGGGAAATCAAGCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp GGGGAAGACACCCCGAGCTCAACAGCTGCCTGTTCTGACAGATCTCTTCCTATGCATCTTCCTCTCCTGTaGGGTGCAACAGGATGTCCG +
Preference number: 4 (lower is better)
Translates to: GEDTPSSTAACSDRSLPMHLPLL*GATGCP
Trigger: CGGACATCCTGTTGCACCCCACAGGAGAGGAAGATG...CATAGGAAGAGATCTGTCAGAACAGGCAGCTGTTGAGCTCGGGGTGTCTTCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651849.1
CDS-3UTR TCA 90 bp CCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGGTGCATTCTCAGTGGTaGTGGGCACCAGCTCATGGT +
Preference number: 4 (lower is better)
Translates to: PRCTFFSPPKLAQSPPSGVHSQW*WAPAHG
Trigger: ACCATGAGCTGGTGCCCATCACCACTGAGAATGCAC...CCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp ACCCTCCTTTCCAACTCCCTGAAACAGAACGTCCACACTGACACAGCTCCTTGGGTGCATTCTCAGTGGTaGTGGGCACCAGCTCATGGT +
Preference number: 4 (lower is better)
Translates to: TLLSNSLKQNVHTDTAPWVHSQW*WAPAHG
Trigger: ACCATGAGCTGGTGCCCATCACCACTGAGAATGCAC...CCAAGGAGCTGTGTCAGTGTGGACGTTCTGTTTCAGGGAGTTGGAAAGGAGGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp CCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTCACACTCATGTTTCTaGTGGGCTGGAGGTGGGGCT +
Preference number: 4 (lower is better)
Translates to: PRCTFFSPPKLAQSPPSGSHSCF*WAGGGA
Trigger: AGCCCCACCTCCAGCCCATCAGAAACATGAGTGTGA...CCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp CCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGCTCCATGTTTGGACTTaGGCATCTGCGCCACCTCAC +
Preference number: 4 (lower is better)
Translates to: PRCTFFSPPKLAQSPPSGLHVWT*ASAPPH
Trigger: GTGAGGTGGCGCAGATGCTCAAGTCCAAACATGGAG...CCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp CACAGGGCAGAGTCCAGGAGCCAGAACACTTCCTTGGCTTGGAAAAGGAAAAAGTGGCATGGAGCTTCGTaGTGTCAGGTCTCCGCTCAG +
Preference number: 4 (lower is better)
Translates to: HRAESRSQNTSLAWKRKKWHGAS*CQVSAQ
Trigger: CTGAGCGGAGACCTGACATCACGAAGCTCCATGCCA...CTTTTTCCTTTTCCAAGCCAAGGAAGTGTTCTGGCTCCTGGACTCTGCCCTGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310858.10
CDS-3UTR TCA 90 bp GCAATTCACTTCCCTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCTGGCATGGAGCTTCGTaGTGTCAGGTCTCCGCTCAG +
Preference number: 4 (lower is better)
Translates to: AIHFPLPTLHFLLSSEIGWHGAS*CQVSAQ
Trigger: CTGAGCGGAGACCTGACATCACGAAGCTCCATGCCA...GCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGGGAAGTGAATTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp CTTCCCTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCGCATGTAAGCCGCGATaGCAACTCCTATCCTGCCTC +
Preference number: 4 (lower is better)
Translates to: LPSPHVALSSLLRNWPKVACKPR*QLLSCL
Trigger: GAGGCAGGATAGGAGTTGTCATCGCGGCTTACATGC...GACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGGGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp ATGCGCACACACGTCCTGTGTTACCACTGGCCAAGGAAACGCGAGTCTCAGGATGCTTGTTGTTCATTTTaGTGGAGCCGGAGAGCAGGC +
Preference number: 4 (lower is better)
Translates to: MRTHVLCYHWPRKRESQDACCSF*WSRRAG
Trigger: GCCTGCTCTCCGGCTCCATCAAAATGAACAACAAGC...ATCCTGAGACTCGCGTTTCCTTGGCCAGTGGTAACACAGGACGTGTGTGCGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp AAAATGCAAACATCCCCAGCACAACGACCAATTAGGCTGGCAGCCACTGAAACCACTGCACACGGAAGATaGCGTCTCGGGCTGGGCTTC +
Preference number: 4 (lower is better)
Translates to: KMQTSPAQRPIRLAATETTAHGR*RLGLGF
Trigger: GAAGCCCAGCCCGAGACGTCATCTTCCGTGTGCAGT...GGTTTCAGTGGCTGCCAGCCTAATTGGTCGTTGTGCTGGGGATGTTTGCATTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000453356.1
CDS-3UTR TCA 90 bp CTTCCCTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCCATCTCGATGCCCACTaGAGTTGTCGTAGGAGTCCC +
Preference number: 4 (lower is better)
Translates to: LPSPHVALSSLLRNWPKVHLDAH*SCRRSP
Trigger: GGGACTCCTACGACAACTTCAGTGGGCATCGAGATG...GACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGGGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp TTGGGTTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTCTCCTCCATCTGCTGGGCGGGACCTaGGGTGCTGGGTGTGGTACA +
Preference number: 4 (lower is better)
Translates to: LGFCSFHLPRGIQVLLLHLLGGT*GAGCGT
Trigger: TGTACCACACCCAGCACCTCAGGTCCCGCCCAGCAG...ATGGAGGAGAAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAACCCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp CTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCATGCCCCACCATTGACATaGACCTGGGCTGGGACAACG +
Preference number: 4 (lower is better)
Translates to: LRNWPKVLLLGSRVVRIHAPPLT*TWAGTT
Trigger: CGTTGTCCCAGCCCAGGTTCATGTCAATGGTGGGGC...ATGAATCCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp AATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCATGGGTCCCCTCACTGGTGTTGGTaGCCCCGTCCAGAGAAGAGA +
Preference number: 4 (lower is better)
Translates to: NWPKVLLLGSRVVRIHGSPHWCW*PRPEKR
Trigger: TCTCTTCTCTGGACGGGGTCACCAACACCAGTGAGG...GGACCCATGAATCCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp GGGGAAGACACCCCGAGCTCAACAGCTGCCTGTTCTGACAGATCTCTTCCTATGGCTTCCGAAAAGGATTaGGAGCGGAACATACCGCTG +
Preference number: 4 (lower is better)
Translates to: GEDTPSSTAACSDRSLPMASEKD*ERNIPL
Trigger: CAGCGGTATGTTCCGCTCTCAATCCTTTTCGGAAGC...CATAGGAAGAGATCTGTCAGAACAGGCAGCTGTTGAGCTCGGGGTGTCTTCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp GTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCATGGGTCCCCTCCCCACAAGAGAGGCTGGGCTCTTTaGATGGAAATCCTGGTTAGG +
Preference number: 4 (lower is better)
Translates to: VLLLGSRVVRIHGSPPHKRGWAL*MEILVR
Trigger: CCTAACCAGGATTTCCATTCAAAGAGCCCAGCCTCT...CTTGTGGGGAGGGGACCCATGAATCCTGACCACTCTTGAACCCAGAAGGAGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp GGGCGATGCCATTGCAGACCCTCCCACTCCTGCTGGGGTCTTTGTAGAAGAGAAAGAGGCTGGGCTCTTTaGATGGAAATCCTGGTTAGG +
Preference number: 4 (lower is better)
Translates to: GRCHCRPSHSCWGLCRRERGWAL*MEILVR
Trigger: CCTAACCAGGATTTCCATTCAAAGAGCCCAGCCTCT...TTCTCTTCTACAAAGACCCCAGCAGGAGTGGGAGGGTCTGCAATGGCATCGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp CCATTCTGGCTTAGAGTCCTTAAATGGTGGTCAGGTGTTTTCCCAACTGTCCAGGCTCCGGGGCTCTTCTaGCAGCCTGACCACCACCTT +
Preference number: 4 (lower is better)
Translates to: PFWLRVLKWWSGVFPTVQAPGLF*QPDHHL
Trigger: AAGGTGGTGGTCAGGCTGTCAGAAGAGCCCCGGAGC...CTGGACAGTTGGGAAAACACCTGACCACCATTTAAGGACTCTAAGCCAGAATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000171887.8
ENST00000651849.1
CDS-3UTR TCA 90 bp TTGATTTCCCCTTGCAAAGCAGTTGAGTTAGGGAGACAGAGCTTTTCCATTCCCTTGGGCTCAGAGTCCTaGGCTCGGGGTCCAGCCACC +
Preference number: 4 (lower is better)
Translates to: LISPCKAVELGRQSFSIPLGSES*ARGPAT
Trigger: GGTGGCTGGACCCCGAGCTCAGGACTCTGAGCCCAA...GGGAATGGAAAAGCTCTGTCTCCCTAACTCAACTGCTTTGCAAGGGGAAATCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp AATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCATGGGTCCCGGGAAACTCCCCACTaGAGTGCTGTCAGCACTGAG +
Preference number: 4 (lower is better)
Translates to: NWPKVLLLGSRVVRIHGSRETPH*SAVSTE
Trigger: CTCAGTGCTGACAGCACTTCAGTGGGGAGTTTCCCG...GGACCCATGAATCCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp TCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATCGGGAAACTCCCCACTaGAGTGCTGTCAGCACTGAG +
Preference number: 4 (lower is better)
Translates to: SPPKLAQSPPSGFKSGQDRETPH*SAVSTE
Trigger: CTCAGTGCTGACAGCACTTCAGTGGGGAGTTTCCCG...ATCCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp CCATTCTGGCTTAGAGTCCTTAAATGGTGGTCAGGTGTTTTCCCAACTGTCCAGCTGTCCCAGGCTGCCTaGGCGGAAGCCAGACTCCAA +
Preference number: 4 (lower is better)
Translates to: PFWLRVLKWWSGVFPTVQLSQAA*AEARLQ
Trigger: TTGGAGTCTGGCTTCCGCTCAGGCAGCCTGGGACAG...CTGGACAGTTGGGAAAACACCTGACCACCATTTAAGGACTCTAAGCCAGAATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp TCTGCAATTCACTTCCCTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATTCTGTCCCAGGCTGCCTaGGCGGAAGCCAGACTCCAA +
Preference number: 4 (lower is better)
Translates to: SAIHFPLPTLHFLLSSEILSQAA*AEARLQ
Trigger: TTGGAGTCTGGCTTCCGCTCAGGCAGCCTGGGACAG...AATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGGGAAGTGAATTGCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp ATGTCCCACGGTGGCTCTGTTTGGTTTGACAACCTACCCCACAGGTGGCCAGAAGCTGAAATGCTGAAGTaGGTAGTCGGGGCTGCTGTA +
Preference number: 4 (lower is better)
Translates to: MSHGGSVWFDNLPHRWPEAEMLK*VVGAAV
Trigger: TACAGCAGCCCCGACTACTCACTTCAGCATTTCAGC...TTCTGGCCACCTGTGGGGTAGGTTGTCAAACCAAACAGAGCCACCGTGGGACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp CCTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCCTCCGCTGAAATGCTGAAGTaGGTAGTCGGGGCTGCTGTA +
Preference number: 4 (lower is better)
Translates to: PLPTLHFLLSSEIGPKSSAEMLK*VVGAAV
Trigger: TACAGCAGCCCCGACTACTCACTTCAGCATTTCAGC...GGAGGACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp GCTATCGCTGAGACTCCACCAATTGGTTGGCCTACAGGCCTCACCTCCCGACTCTTTCCGGAGAGGAGCTaGAATGCTGAAGTGAGTAGT +
Preference number: 4 (lower is better)
Translates to: AIAETPPIGWPTGLTSRLFPERS*NAEVSS
Trigger: ACTACTCACTTCAGCATTTCAGCTCCTCTCCGGAAA...GAGTCGGGAGGTGAGGCCTGTAGGCCAACCAATTGGTGGAGTCTCAGCGATAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp TCTAGATCAATGTGTGAGGATGTGGGTGCAGACACACACCCACACGACAATATAGGACGCCAGCCACACTaGACTGAGCTCGAGCCTGGC +
Preference number: 4 (lower is better)
Translates to: SRSMCEDVGADTHPHDNIGRQPH*TELEPG
Trigger: GCCAGGCTCGAGCTCAGTTCAGTGTGGCTGGCGTCC...TATATTGTCGTGTGGGTGTGTGTCTGCACCCACATCCTCACACATTGATCTAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp TTGATTTCCCCTTGCAAAGCAGTTGAGTTAGGGAGACAGAGCTTTTCCATTCCCGGACGCCAGCCACACTaGACTGAGCTCGAGCCTGGC +
Preference number: 4 (lower is better)
Translates to: LISPCKAVELGRQSFSIPGRQPH*TELEPG
Trigger: GCCAGGCTCGAGCTCAGTTCAGTGTGGCTGGCGTCC...GGGAATGGAAAAGCTCTGTCTCCCTAACTCAACTGCTTTGCAAGGGGAAATCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp CTTCCCTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCGGACCCATCATCTGGTaGTGGCTCAAACTGGGACTG +
Preference number: 4 (lower is better)
Translates to: LPSPHVALSSLLRNWPKVGPIIW*WLKLGL
Trigger: CAGTCCCAGTTTGAGCCATCACCAGATGATGGGTCC...GACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGGGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp CTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCATTGCCCGGTCTCCCACTaGCATCCTTCGCTTCTCTGG +
Preference number: 4 (lower is better)
Translates to: LRNWPKVLLLGSRVVRIHCPVSH*HPSLLW
Trigger: CCAGAGAAGCGAAGGATGTCAGTGGGAGACCGGGCA...ATGAATCCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp GTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCATGGGTCCCCTCCCCACAAGAAGACACCTTCCCATTaGTGGTGGCATAGTTGGGGA +
Preference number: 4 (lower is better)
Translates to: VLLLGSRVVRIHGSPPHKKTPSH*WWHSWG
Trigger: TCCCCAACTATGCCACCATCAATGGGAAGGTGTCTT...CTTGTGGGGAGGGGACCCATGAATCCTGACCACTCTTGAACCCAGAAGGAGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp CGATGCCATTGCAGACCCTCCCACTCCTGCTGGGGTCTTTGTAGAAGAGAAGGGAAGACACCTTCCCATTaGTGGTGGCATAGTTGGGGA +
Preference number: 4 (lower is better)
Translates to: RCHCRPSHSCWGLCRREGKTPSH*WWHSWG
Trigger: TCCCCAACTATGCCACCATCAATGGGAAGGTGTCTT...CCCTTCTCTTCTACAAAGACCCCAGCAGGAGTGGGAGGGTCTGCAATGGCATCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp ATGTCCCACGGTGGCTCTGTTTGGTTTGACAACCTACCCCACAGGTGGCCAGAACCATGTCCACAGAGTTaGCGAAGAGCACATTGCAGG +
Preference number: 4 (lower is better)
Translates to: MSHGGSVWFDNLPHRWPEPCPQS*RRAHCR
Trigger: CCTGCAATGTGCTCTTCGTCAACTCTGTGGACATGG...TTCTGGCCACCTGTGGGGTAGGTTGTCAAACCAAACAGAGCCACCGTGGGACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp CCAGAACACCGTGATAGCAGGCTGATCAAACCGCTCACTTCCTCCCTGTTTTCCCTGTGGCCCAGTGAGTaGCTCCATGTCCACAGAGTT +
Preference number: 4 (lower is better)
Translates to: PEHRDSRLIKPLTSSLFSLWPSE*LHVHRV
Trigger: AACTCTGTGGACATGGAGTCACTCACTGGGCCACAG...GGAAAACAGGGAGGAAGTGAGCGGTTTGATCAGCCTGCTATCACGGTGTTCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp CTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCATTGGCCTGTGGCCCAGTaGGTGACTCCATGTCCACAG +
Preference number: 4 (lower is better)
Translates to: LRNWPKVLLLGSRVVRIHWPVAQ*VTPCPQ
Trigger: CTGTGGACATGGAGTCACTCACTGGGCCACAGGCCA...ATGAATCCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp TTCCTTCGCAGGTCCCCTCTCCATTGTTTTCTCGCCCAATCCTTCCCTCTTGCTCCTGGGCAGAGACTTTaGAGTGAACGATGGTGGCAG +
Preference number: 4 (lower is better)
Translates to: FLRRSPLHCFLAQSFPLAPGQRL*SERWWQ
Trigger: CTGCCACCATCGTTCACTTCAAAGTCTCTGCCCAGG...AGCAAGAGGGAAGGATTGGGCGAGAAAACAATGGAGAGGGGACCTGCGAAGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp CCCAGCTTGATTTCCCCTTGCAAAGCAGTTGAGTTAGGGAGACAGAGCTTTTCCCCTTGGAGACGAAGTTaGCGATGGCAGAGGCCGGCT +
Preference number: 4 (lower is better)
Translates to: PSLISPCKAVELGRQSFSPWRRS*RWQRPA
Trigger: AGCCGGCCTCTGCCATCGTCAACTTCGTCTCCAAGG...GGAAAAGCTCTGTCTCCCTAACTCAACTGCTTTGCAAGGGGAAATCAAGCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp CCTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCCTCCTGGCTCTGTTTGGTTTaGCAACCTACCCCACAGGTG +
Preference number: 4 (lower is better)
Translates to: PLPTLHFLLSSEIGPKSSWLCLV*QPTPQV
Trigger: CACCTGTGGGGTAGGTTGTCAAACCAAACAGAGCCA...GGAGGACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp TGCAGGCACCAGGAGAGAGCCTCTGTCACCCATAGCTTGGTTGTTTGTCCCTCCTCCTTTCCAACTCCCTaGAACAGAACGTCCACACTG +
Preference number: 4 (lower is better)
Translates to: CRHQERASVTHSLVVCPSSFPTP*NRTSTL
Trigger: CAGTGTGGACGTTCTGTTTCAGGGAGTTGGAAAGGA...GGAGGGACAAACAACCAAGCTATGGGTGACAGAGGCTCTCTCCTGGTGCCTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp CCATTCTGGCTTAGAGTCCTTAAATGGTGGTCAGGTGTTTTCCCAACTGTCCAGGGCTGTGGTGGGTGGTaGGGAAGGGAAAAGCGACCG +
Preference number: 4 (lower is better)
Translates to: PFWLRVLKWWSGVFPTVQGCGGW*GREKRP
Trigger: CGGTCGCTTTTCCCTTCCTCACCACCCACCACAGCC...CTGGACAGTTGGGAAAACACCTGACCACCATTTAAGGACTCTAAGCCAGAATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp CTTCCCTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCCACACTCTCAGAAACTaGCTCCTTCCGCAGGGATGC +
Preference number: 4 (lower is better)
Translates to: LPSPHVALSSLLRNWPKVHTLRN*LLPQGC
Trigger: GCATCCCTGCGGAAGGAGTCAGTTTCTGAGAGTGTG...GACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGGGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp TTCCTTCGCAGGTCCCCTCTCCATTGTTTTCTCGCCCAATCCTTCCCTCTTGCTTCGCTGCGATGTCCATaGCTCCCTGGCTCTTTGTTG +
Preference number: 4 (lower is better)
Translates to: FLRRSPLHCFLAQSFPLASLRCP*LPGSLL
Trigger: CAACAAAGAGCCAGGGAGTCATGGACATCGCAGCGA...AGCAAGAGGGAAGGATTGGGCGAGAAAACAATGGAGAGGGGACCTGCGAAGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp ACAGGGCGATGCCATTGCAGACCCTCCCACTCCTGCTGGGGTCTTTGTAGAAGATACTCACTAACCTCCTaGGAGCCGTTTATAGGGGGA +
Preference number: 4 (lower is better)
Translates to: TGRCHCRPSHSCWGLCRRYSLTS*EPFIGG
Trigger: TCCCCCTATAAACGGCTCTCAGGAGGTTAGTGAGTA...TCTTCTACAAAGACCCCAGCAGGAGTGGGAGGGTCTGCAATGGCATCGCCCTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp GCAATTCACTTCCCTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCGGGAAGGATGCTGGGTaGTCTTGTTTCCCCCGCAGA +
Preference number: 4 (lower is better)
Translates to: AIHFPLPTLHFLLSSEIGGKDAG*SCFPRR
Trigger: TCTGCGGGGGAAACAAGATCACCCAGCATCCTTCCC...GCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGGGAAGTGAATTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp AAGAGAAGGGTCTGGCGGCACCCAGGGTCACTAGAGTGCAGGTGCAGGCACCAGCTGAAAGAGTCCAAATaGATAAACACAGGGAACCAG +
Preference number: 4 (lower is better)
Translates to: KRRVWRHPGSLECRCRHQLKESK*INTGNQ
Trigger: CTGGTTCCCTGTGTTTATTCATTTGGACTCTTTCAG...CTGGTGCCTGCACCTGCACTCTAGTGACCCTGGGTGCCGCCAGACCCTTCTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646520.1
CDS-3UTR GCA 90 bp ATTGGTTGGCCTACAGGCCTCACCTCCCGACTCCCCTCACTGCTGGGCGACATTCACTACATTCTTTGGTaGATTCTCAGTGGTGATGGG +
Preference number: 4 (lower is better)
Translates to: IGWPTGLTSRLPSLLGDIHYILW*ILSGDG
Trigger: CCCATCACCACTGAGAATGCACCAAAGAATGTAGTG...AATGTCGCCCAGCAGTGAGGGGAGTCGGGAGGTGAGGCCTGTAGGCCAACCAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp CCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGCCACCTCACGGAGGTTaGTCCGGAAGTTCTCCTCAT +
Preference number: 4 (lower is better)
Translates to: PRCTFFSPPKLAQSPPSGPPHGG*SGSSPH
Trigger: ATGAGGAGAACTTCCGGAGCAACCTCCGTGAGGTGG...CCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp ATGTCCCACGGTGGCTCTGTTTGGTTTGACAACCTACCCCACAGGTGGCCAGAAAAGTTGGGGATGCCGTaGATGATCACGTGGTGCAGA +
Preference number: 4 (lower is better)
Translates to: MSHGGSVWFDNLPHRWPEKLGMP*MITWCR
Trigger: TCTGCACCACGTGATCATGCACGGCATCCCCAACTT...TTCTGGCCACCTGTGGGGTAGGTTGTCAAACCAAACAGAGCCACCGTGGGACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp ATTGGTTGGCCTACAGGCCTCACCTCCCGACTCCCCTCACTGCTGGGCGACATTCTGGGATGTTGTAGATaGCAGATGTGTACACAGGTT +
Preference number: 4 (lower is better)
Translates to: IGWPTGLTSRLPSLLGDILGCCR*QMCTQV
Trigger: AACCTGTGTACACATCTGGCATCTACAACATCCCAG...AATGTCGCCCAGCAGTGAGGGGAGTCGGGAGGTGAGGCCTGTAGGCCAACCAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp GTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCATGGGTCCCCTCCCCACAAGTCTCCAGGTGCTCCATaGCTTGAATTTTCTCTGGCC +
Preference number: 4 (lower is better)
Translates to: VLLLGSRVVRIHGSPPHKSPGAP*LEFSLA
Trigger: GGCCAGAGAAAATTCAAGGCATGGAGCACCTGGAGA...CTTGTGGGGAGGGGACCCATGAATCCTGACCACTCTTGAACCCAGAAGGAGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp ACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTCCATCTAGTGGCCCCTaGGTGTGTCCCACCACCTCC +
Preference number: 4 (lower is better)
Translates to: TFFSPPKLAQSPPSGFKSPSSGP*VCPTTS
Trigger: GGAGGTGGTGGGACACACGCAGGGGCCACTAGATGG...ACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp CTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCATGCCCCGGTGCTGCCGTaGAGGGAGTCTTTCTTCTTC +
Preference number: 4 (lower is better)
Translates to: LRNWPKVLLLGSRVVRIHAPVLP*RESFFF
Trigger: GAAGAAGAAAGACTCCCTGCACGGCAGCACCGGGGC...ATGAATCCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp TCTCCTGGCCAGTCTCAGAAGACCCAGGGATCCTCAAAAACCAGGGGAGAAGGAAGTTGCCCGAGTCGCTaGTCACAGAAAGCGTGTGTT +
Preference number: 4 (lower is better)
Translates to: SPGQSQKTQGSSKTRGEGSCPSR*SQKACV
Trigger: AACACACGCTTTCTGTGAGCAGCGACTCGGGCAACT...TCCTTCTCCCCTGGTTTTTGAGGATCCCTGGGTCTTCTGAGACTGGCCAGGAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp CTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCATTGGAGGCTGTGGAGTTaGCCGAGTCGCTGCTCACAG +
Preference number: 4 (lower is better)
Translates to: LRNWPKVLLLGSRVVRIHWRLWS*PSRCSQ
Trigger: CTGTGAGCAGCGACTCGGGCAACTCCACAGCCTCCA...ATGAATCCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp CCTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCCTCCTGGTACATGGCGCCTTaGTTCTCTCGCTCTAAGCCA +
Preference number: 4 (lower is better)
Translates to: PLPTLHFLLSSEIGPKSSWYMAP*FSRSKP
Trigger: TGGCTTAGAGCGAGAGAAGCAAGGCGCCATGTACCA...GGAGGACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp CCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGGAATTCAGTCCCCTTTaGACAGCCTCCCGGCTGCTT +
Preference number: 4 (lower is better)
Translates to: PRCTFFSPPKLAQSPPSGEFSPL*TASRLL
Trigger: AAGCAGCCGGGAGGCTGTGCAAAGGGGACTGAATTC...CCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp AATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCATGGGTCCTGCTGCTGCTGCTGCTaGTGCCACGAATTCAGTCCC +
Preference number: 4 (lower is better)
Translates to: NWPKVLLLGSRVVRIHGSCCCCC*CHEFSP
Trigger: GGGACTGAATTCGTGGCAGCAGCAGCAGCAGCAGCA...GGACCCATGAATCCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp TTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTCTCCTCCATCTTTCAGGGGCTGGGGGCTCTaGAGGCTGCTTCTCCCGAGC +
Preference number: 4 (lower is better)
Translates to: FLQFPSTQGNPSSSPPSFRGWGL*RLLLPS
Trigger: GCTCGGGAGAAGCAGCCTGCAGAGCCCCCAGCCCCT...GAAAGATGGAGGAGAAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp GTTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTCTCCTCCATCTTTAGGGGCTGGGGGCTCTaGAGGCTGCTTCTCCCGAGC +
Preference number: 4 (lower is better)
Translates to: VFAVSIYPGESKFFSSIFRGWGL*RLLLPS
Trigger: GCTCGGGAGAAGCAGCCTGCAGAGCCCCCAGCCCCT...AAAGATGGAGGAGAAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp GAAATCTTTGGCAAGAATATACTGCAGTGCGGAGTGTTGTGTGTGCGTAGGTGTCACTGGGTGGTGGGCTaGTCGGGGAGGTTCCCTCCA +
Preference number: 4 (lower is better)
Translates to: EIFGKNILQCGVLCVRRCHWVVG*SGRFPP
Trigger: TGGAGGGAACCTCCCCGAGCAGCCCACCACCCAGTG...ACACCTACGCACACACAACACTCCGCACTGCAGTATATTCTTGCCAAAGATTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp TTGATTTCCCCTTGCAAAGCAGTTGAGTTAGGGAGACAGAGCTTTTCCATTCCCCACTGGGTGGTGGGCTaGTCGGGGAGGTTCCCTCCA +
Preference number: 4 (lower is better)
Translates to: LISPCKAVELGRQSFSIPHWVVG*SGRFPP
Trigger: TGGAGGGAACCTCCCCGAGCAGCCCACCACCCAGTG...GGGAATGGAAAAGCTCTGTCTCCCTAACTCAACTGCTTTGCAAGGGGAAATCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp GTACAGGAGTGGGGACGCGTCAGTGTACAATACATTCATGTCCAGGATAAGGAGGGCTGCTGTAGCTACTaGCCACAGTCGGGAGAGGAG +
Preference number: 4 (lower is better)
Translates to: VQEWGRVSVQYIHVQDKEGCCSY*PQSGEE
Trigger: CTCCTCTCCCGACTGTGGGCAGTAGCTACAGCAGCC...CTCCTTATCCTGGACATGAATGTATTGTACACTGACGCGTCCCCACTCCTGTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp GGGGAAGACACCCCGAGCTCAACAGCTGCCTGTTCTGACAGATCTCTTCCTATGTACCATGGAAGCCAGTaGCTGGTGGACCCATCATCT +
Preference number: 4 (lower is better)
Translates to: GEDTPSSTAACSDRSLPMYHGSQ*LVDPSS
Trigger: AGATGATGGGTCCACCAGGCACTGGCTTCCATGGTA...CATAGGAAGAGATCTGTCAGAACAGGCAGCTGTTGAGCTCGGGGTGTCTTCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp ATGTCCCACGGTGGCTCTGTTTGGTTTGACAACCTACCCCACAGGTGGCCAGAATACCATGGAAGCCAGTaGCTGGTGGACCCATCATCT +
Preference number: 4 (lower is better)
Translates to: MSHGGSVWFDNLPHRWPEYHGSQ*LVDPSS
Trigger: AGATGATGGGTCCACCAGGCACTGGCTTCCATGGTA...TTCTGGCCACCTGTGGGGTAGGTTGTCAAACCAAACAGAGCCACCGTGGGACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp GAAATCTTTGGCAAGAATATACTGCAGTGCGGAGTGTTGTGTGTGCGTAGGTGTGACCGGAGGCCAGGTTaGCTTGGTGAGCCCCAGGGT +
Preference number: 4 (lower is better)
Translates to: EIFGKNILQCGVLCVRRCDRRPG*LGEPQG
Trigger: ACCCTGGGGCTCACCAAGGCAACCTGGCCTCCGGTC...ACACCTACGCACACACAACACTCCGCACTGCAGTATATTCTTGCCAAAGATTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp TTGATTTCCCCTTGCAAAGCAGTTGAGTTAGGGAGACAGAGCTTTTCCATTCCCGACCGGAGGCCAGGTTaGCTTGGTGAGCCCCAGGGT +
Preference number: 4 (lower is better)
Translates to: LISPCKAVELGRQSFSIPDRRPG*LGEPQG
Trigger: ACCCTGGGGCTCACCAAGGCAACCTGGCCTCCGGTC...GGGAATGGAAAAGCTCTGTCTCCCTAACTCAACTGCTTTGCAAGGGGAAATCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp GATCTAGATCAATGTGTGAGGATGTGGGTGCAGACACACACCCACACGACAATAGGTCCAAGCAGGGGCTaGCGGGAACCACAGATCCAG +
Preference number: 4 (lower is better)
Translates to: DLDQCVRMWVQTHTHTTIGPSRG*REPQIQ
Trigger: CTGGATCTGTGGTTCCCGGCAGCCCCTGCTTGGACC...TATTGTCGTGTGGGTGTGTGTCTGCACCCACATCCTCACACATTGATCTAGATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp ATGTCCAGGATAAGGAGCATACACCAGGATTTATACACGGTGGCAGCGGCTATACCAGAGGCACTGCTCTaGCGGGACAGTGTGGGTCTC +
Preference number: 4 (lower is better)
Translates to: MSRIRSIHQDLYTVAAAIPEALL*RDSVGL
Trigger: GAGACCCACACTGTCCCGGCAGAGCAGTGCCTCTGG...TATAGCCGCTGCCACCGTGTATAAATCCTGGTGTATGCTCCTTATCCTGGACAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp AGATCTAGATCAATGTGTGAGGATGTGGGTGCAGACACACACCCACACGACAATGGTGTTGGGCTCCCTTaGCGGAAGGCTGCGGAGTCT +
Preference number: 4 (lower is better)
Translates to: RSRSMCEDVGADTHPHDNGVGLP*RKAAES
Trigger: AGACTCCGCAGCCTTCCGGCAAGGGAGCCCAACACC...ATTGTCGTGTGGGTGTGTGTCTGCACCCACATCCTCACACATTGATCTAGATCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp CTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCATAGAAGGAGACGGTGCTaGCCCCACTGGGACTGGACA +
Preference number: 4 (lower is better)
Translates to: LRNWPKVLLLGSRVVRIHRRRRC*PHWDWT
Trigger: TGTCCAGTCCCAGTGGGGGCAGCACCGTCTCCTTCT...ATGAATCCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp TTGGGTTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTCTCCTCCATGGGAGAAGGAGACGGTaGTGCCCCCACTGGGACTGG +
Preference number: 4 (lower is better)
Translates to: LGFCSFHLPRGIQVLLLHGRRRR*CPHWDW
Trigger: CCAGTCCCAGTGGGGGCAGCACCGTCTCCTTCTCCC...ATGGAGGAGAAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAACCCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp GCTATCGCTGAGACTCCACCAATTGGTTGGCCTACAGGCCTCACCTCCCGACTCGTCTCTATCAGAAAATaGCTGACCAGCTCATGGGTC +
Preference number: 4 (lower is better)
Translates to: AIAETPPIGWPTGLTSRLVSIRK*LTSSWV
Trigger: GACCCATGAGCTGGTCAGGCATTTTCTGATAGAGAC...GAGTCGGGAGGTGAGGCCTGTAGGCCAACCAATTGGTGGAGTCTCAGCGATAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp TCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATAGCTGGCGTGGGGTCTaGAGCCAACGTCTCAGATGT +
Preference number: 4 (lower is better)
Translates to: SPPKLAQSPPSGFKSGQDSWRGV*SQRLRC
Trigger: ACATCTGAGACGTTGGCTGCAGACCCCACGCCAGCT...ATCCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp TCTCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGTCCCTCTCCCCACGTTaGACTTTCTTCTCTCCTCCG +
Preference number: 4 (lower is better)
Translates to: SLLRNWPKVLLLGSRVVRSLSPR*TFFSPP
Trigger: CGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGGGA...CCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp ACCCTCCTTTCCAACTCCCTGAAACAGAACGTCCACACTGACACAGCTCCTTGGTTTCCCCCTCCCCTCTaGAATTCACTTCCCTCTCCC +
Preference number: 4 (lower is better)
Translates to: TLLSNSLKQNVHTDTAPWFPPPL*NSLPSP
Trigger: GGGAGAGGGAAGTGAATTGCAGAGGGGAGGGGGAAA...CCAAGGAGCTGTGTCAGTGTGGACGTTCTGTTTCAGGGAGTTGGAAAGGAGGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp ATTGGTTGGCCTACAGGCCTCACCTCCCGACTCCCCTCACTGCTGGGCGACATTAGCTTGATTTCCCCTTaGAAAGCAGTTGAGTTAGGG +
Preference number: 4 (lower is better)
Translates to: IGWPTGLTSRLPSLLGDISLISP*KAVELG
Trigger: CCCTAACTCAACTGCTTTGCAAGGGGAAATCAAGCT...AATGTCGCCCAGCAGTGAGGGGAGTCGGGAGGTGAGGCCTGTAGGCCAACCAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp CTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCATCCAGGGTCACTAGAGTaGAGGTGCAGGCACCAGGAG +
Preference number: 4 (lower is better)
Translates to: LRNWPKVLLLGSRVVRIHPGSLE*RCRHQE
Trigger: CTCCTGGTGCCTGCACCTGCACTCTAGTGACCCTGG...ATGAATCCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp TCTCCTGGCCAGTCTCAGAAGACCCAGGGATCCTCAAAAACCAGGGGAGAAGGAAGACCCTCCCACTCCTaGTGGGGTCTTTGTAGAAGA +
Preference number: 4 (lower is better)
Translates to: SPGQSQKTQGSSKTRGEGRPSHS*WGLCRR
Trigger: TCTTCTACAAAGACCCCAGCAGGAGTGGGAGGGTCT...TCCTTCTCCCCTGGTTTTTGAGGATCCCTGGGTCTTCTGAGACTGGCCAGGAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp GATCTAGATCAATGTGTGAGGATGTGGGTGCAGACACACACCCACACGACAATACCTTCTGCCCTCTGCTaGATGGGCAGCGTGGCTCAG +
Preference number: 4 (lower is better)
Translates to: DLDQCVRMWVQTHTHTTIPSALC*MGSVAQ
Trigger: CTGAGCCACGCTGCCCATGCAGCAGAGGGCAGAAGG...TATTGTCGTGTGGGTGTGTGTCTGCACCCACATCCTCACACATTGATCTAGATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp TCTCCTGGCCAGTCTCAGAAGACCCAGGGATCCTCAAAAACCAGGGGAGAAGGAACACGCACCTATGTGTaGCATACACACCCATGTCCC +
Preference number: 4 (lower is better)
Translates to: SPGQSQKTQGSSKTRGEGTRTYV*HTHPCP
Trigger: GGGACATGGGTGTGTATGGCACACATAGGTGCGTGT...TCCTTCTCCCCTGGTTTTTGAGGATCCCTGGGTCTTCTGAGACTGGCCAGGAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp GTACAGGAGTGGGGACGCGTCAGTGTACAATACATTCATGTCCAGGATAAGGAGGGGCCCCAGCCAGGCTaGTTGAAGGGTCTGATACAC +
Preference number: 4 (lower is better)
Translates to: VQEWGRVSVQYIHVQDKEGPQPG*LKGLIH
Trigger: GTGTATCAGACCCTTCAAGCAGCCTGGCTGGGGCCC...CTCCTTATCCTGGACATGAATGTATTGTACACTGACGCGTCCCCACTCCTGTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp TTCCTTCGCAGGTCCCCTCTCCATTGTTTTCTCGCCCAATCCTTCCCTCTTGCTTCCCTGGCTCTTTGTTaGCCATCTTCTCCCAGACCC +
Preference number: 4 (lower is better)
Translates to: FLRRSPLHCFLAQSFPLASLALC*PSSPRP
Trigger: GGGTCTGGGAGAAGATGGGCAACAAAGAGCCAGGGA...AGCAAGAGGGAAGGATTGGGCGAGAAAACAATGGAGAGGGGACCTGCGAAGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp CTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCATGAACCTGCTGGGGTCTaGGTCGCTGCGATGTCCATG +
Preference number: 4 (lower is better)
Translates to: LRNWPKVLLLGSRVVRIHEPAGV*VAAMSM
Trigger: CATGGACATCGCAGCGACGCAGACCCCAGCAGGTTC...ATGAATCCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp ATGCGCACACACGTCCTGTGTTACCACTGGCCAAGGAAACGCGAGTCTCAGGATGCAGGATTGGGTGTCTaGCTTGACTCACAGGATCTC +
Preference number: 4 (lower is better)
Translates to: MRTHVLCYHWPRKRESQDAGLGV*LDSQDL
Trigger: GAGATCCTGTGAGTCAAGGCAGACACCCAATCCTGC...ATCCTGAGACTCGCGTTTCCTTGGCCAGTGGTAACACAGGACGTGTGTGCGCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp TCTGCAATTCACTTCCCTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATTGCTGCTCTGGGACTCTaGCCCCCAACCTCTTGGAGG +
Preference number: 4 (lower is better)
Translates to: SAIHFPLPTLHFLLSSEIAALGL*PPTSWR
Trigger: CCTCCAAGAGGTTGGGGGGCAGAGTCCCAGAGCAGC...AATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGGGAAGTGAATTGCAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp CGATGCCATTGCAGACCCTCCCACTCCTGCTGGGGTCTTTGTAGAAGAGAAGGGATCCACACTTGCACATaGGCACACACGTCCTGTGTT +
Preference number: 4 (lower is better)
Translates to: RCHCRPSHSCWGLCRREGIHTCT*AHTSCV
Trigger: AACACAGGACGTGTGTGCGCATGTGCAAGTGTGGAT...CCCTTCTCTTCTACAAAGACCCCAGCAGGAGTGGGAGGGTCTGCAATGGCATCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp GTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCATGGGTCCCCTCCCCACAAGAATTTGAAGTTCCATTaGCCAGCACCTCCAACCCCG +
Preference number: 4 (lower is better)
Translates to: VLLLGSRVVRIHGSPPHKNLKFH*PAPPTP
Trigger: CGGGGTTGGAGGTGCTGGGCAATGGAACTTCAAATT...CTTGTGGGGAGGGGACCCATGAATCCTGACCACTCTTGAACCCAGAAGGAGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp TGCAGGCACCAGGAGAGAGCCTCTGTCACCCATAGCTTGGTTGTTTGTCCCTCCAATTTGAAGTTCCATTaGCCAGCACCTCCAACCCCG +
Preference number: 4 (lower is better)
Translates to: CRHQERASVTHSLVVCPSNLKFH*PAPPTP
Trigger: CGGGGTTGGAGGTGCTGGGCAATGGAACTTCAAATT...GGAGGGACAAACAACCAAGCTATGGGTGACAGAGGCTCTCTCCTGGTGCCTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp TTCCTTCGCAGGTCCCCTCTCCATTGTTTTCTCGCCCAATCCTTCCCTCTTGCTTGGGGTGGGGAAGGATaGTGGGTGATCTTGTTTCCC +
Preference number: 4 (lower is better)
Translates to: FLRRSPLHCFLAQSFPLAWGGEG*WVILFP
Trigger: GGGAAACAAGATCACCCAGCATCCTTCCCCACCCCA...AGCAAGAGGGAAGGATTGGGCGAGAAAACAATGGAGAGGGGACCTGCGAAGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp GATCTAGATCAATGTGTGAGGATGTGGGTGCAGACACACACCCACACGACAATAGGCTCTCCTGTGGGGTaGAACAGGATGTCCGCTGGG +
Preference number: 4 (lower is better)
Translates to: DLDQCVRMWVQTHTHTTIGSPVG*NRMSAG
Trigger: CCCAGCGGACATCCTGTTGCACCCCACAGGAGAGCC...TATTGTCGTGTGGGTGTGTGTCTGCACCCACATCCTCACACATTGATCTAGATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000446688.5
ENST00000646520.1
CDS-3UTR GCA 90 bp TCTCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGAGAAGCTGCAGACTTTaGAGGTGCAGCCTTCCTGGG +
Preference number: 4 (lower is better)
Translates to: SLLRNWPKVLLLGSRVVRRSCRL*RCSLPG
Trigger: CCCAGGAAGGCTGCACCTGCAAAGTCTGCAGCTTCT...CCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp ATGCGCACACACGTCCTGTGTTACCACTGGCCAAGGAAACGCGAGTCTCAGGATGATGACAGGAGAAGCTaGAGACTTTGCAGGTGCAGC +
Preference number: 4 (lower is better)
Translates to: MRTHVLCYHWPRKRESQDDDRRS*RLCRCS
Trigger: GCTGCACCTGCAAAGTCTGCAGCTTCTCCTGTCATC...ATCCTGAGACTCGCGTTTCCTTGGCCAGTGGTAACACAGGACGTGTGTGCGCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp ACCCTCCTTTCCAACTCCCTGAAACAGAACGTCCACACTGACACAGCTCCTTGGATGGGCACCAGCTCATaGTTGGATGGAGGAACGCAG +
Preference number: 4 (lower is better)
Translates to: TLLSNSLKQNVHTDTAPWMGTSS*LDGGTQ
Trigger: CTGCGTTCCTCCATCCAACCATGAGCTGGTGCCCAT...CCAAGGAGCTGTGTCAGTGTGGACGTTCTGTTTCAGGGAGTTGGAAAGGAGGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp CCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGCACAGCTGTCCTCCATaGTCCGGCTCACACTCATGT +
Preference number: 4 (lower is better)
Translates to: PRCTFFSPPKLAQSPPSGHSCPP*SGSHSC
Trigger: ACATGAGTGTGAGCCGGACCATGGAGGACAGCTGTG...CCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TCTCCTGGCCAGTCTCAGAAGACCCAGGGATCCTCAAAAACCAGGGGAGAAGGAGGAAGTTCTCCTCATTaGCTGTGCTGGGGAAGGAGA +
Preference number: 4 (lower is better)
Translates to: SPGQSQKTQGSSKTRGEGGSSPH*LCWGRR
Trigger: TCTCCTTCCCCAGCACAGCCAATGAGGAGAACTTCC...TCCTTCTCCCCTGGTTTTTGAGGATCCCTGGGTCTTCTGAGACTGGCCAGGAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp CCTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCCTCCGGAAGTTCTCCTCATTaGCTGTGCTGGGGAAGGAGA +
Preference number: 4 (lower is better)
Translates to: PLPTLHFLLSSEIGPKSSGSSPH*LCWGRR
Trigger: TCTCCTTCCCCAGCACAGCCAATGAGGAGAACTTCC...GGAGGACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp GTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCATGGGTCCCCTCCCCACAAGTCCAGTACCTTGGCATaGAGCTTCGTGATGTCAGGT +
Preference number: 4 (lower is better)
Translates to: VLLLGSRVVRIHGSPPHKSSTLA*SFVMSG
Trigger: ACCTGACATCACGAAGCTCCATGCCAAGGTACTGGA...CTTGTGGGGAGGGGACCCATGAATCCTGACCACTCTTGAACCCAGAAGGAGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp CCTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCCTCCGAGCCTGGTCCGCACTaGCAGAAATGTTGCTGTAGT +
Preference number: 4 (lower is better)
Translates to: PLPTLHFLLSSEIGPKSSEPGPH*QKCCCS
Trigger: ACTACAGCAACATTTCTGCCAGTGCGGACCAGGCTC...GGAGGACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp CACAGGGCAGAGTCCAGGAGCCAGAACACTTCCTTGGCTTGGAAAAGGAAAAAGAACCGGTCCAGAGCCTaGTCCGCACTGGCAGAAATG +
Preference number: 4 (lower is better)
Translates to: HRAESRSQNTSLAWKRKKNRSRA*SALAEM
Trigger: CATTTCTGCCAGTGCGGACCAGGCTCTGGACCGGTT...CTTTTTCCTTTTCCAAGCCAAGGAAGTGTTCTGGCTCCTGGACTCTGCCCTGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310858.10
CDS-3UTR CCA 90 bp TCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATAACCGGTCCAGAGCCTaGTCCGCACTGGCAGAAATG +
Preference number: 4 (lower is better)
Translates to: SPPKLAQSPPSGFKSGQDNRSRA*SALAEM
Trigger: CATTTCTGCCAGTGCGGACCAGGCTCTGGACCGGTT...ATCCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp GGGCGATGCCATTGCAGACCCTCCCACTCCTGCTGGGGTCTTTGTAGAAGAGAAGTACCTTCTTTGGGATaGCTGGCCAATGGGCACAAT +
Preference number: 4 (lower is better)
Translates to: GRCHCRPSHSCWGLCRREVPSLG*LANGHN
Trigger: ATTGTGCCCATTGGCCAGCCATCCCAAAGAAGGTAC...TTCTCTTCTACAAAGACCCCAGCAGGAGTGGGAGGGTCTGCAATGGCATCGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp CGATGCCATTGCAGACCCTCCCACTCCTGCTGGGGTCTTTGTAGAAGAGAAGGGAGTCTGGCTGTCTCCTaGGATGTTGTAGATGCCAGA +
Preference number: 4 (lower is better)
Translates to: RCHCRPSHSCWGLCRREGSLAVS*DVVDAR
Trigger: TCTGGCATCTACAACATCCCAGGAGACAGCCAGACT...CCCTTCTCTTCTACAAAGACCCCAGCAGGAGTGGGAGGGTCTGCAATGGCATCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp ATGTCCCACGGTGGCTCTGTTTGGTTTGACAACCTACCCCACAGGTGGCCAGAAATGCAGACGCTAGTCTaGCTGTCTCCTGGGATGTTG +
Preference number: 4 (lower is better)
Translates to: MSHGGSVWFDNLPHRWPEMQTLV*LSPGML
Trigger: CAACATCCCAGGAGACAGCCAGACTAGCGTCTGCAT...TTCTGGCCACCTGTGGGGTAGGTTGTCAAACCAAACAGAGCCACCGTGGGACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp CACAGGGCAGAGTCCAGGAGCCAGAACACTTCCTTGGCTTGGAAAAGGAAAAAGCCCCCAGGTCATGGATaGCACAGGTGTGGAACTGCA +
Preference number: 4 (lower is better)
Translates to: HRAESRSQNTSLAWKRKKPPGHG*HRCGTA
Trigger: TGCAGTTCCACACCTGTGCCATCCATGACCTGGGGG...CTTTTTCCTTTTCCAAGCCAAGGAAGTGTTCTGGCTCCTGGACTCTGCCCTGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000310858.10
CDS-3UTR CCA 90 bp TCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATCCCCCAGGTCATGGATaGCACAGGTGTGGAACTGCA +
Preference number: 4 (lower is better)
Translates to: SPPKLAQSPPSGFKSGQDPPGHG*HRCGTA
Trigger: TGCAGTTCCACACCTGTGCCATCCATGACCTGGGGG...ATCCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp GTGTGCATGGGTGCACAGCCCGCCGTGACACAGAAGGGCTCTGGTGCAGGGCCCGCCTTGAATTTTCTCTaGCCCATAAGAAAATACAAA +
Preference number: 4 (lower is better)
Translates to: VCMGAQPAVTQKGSGAGPALNFL*PIRKYK
Trigger: TTTGTATTTTCTTATGGGCCAGAGAAAATTCAAGGC...GGGCCCTGCACCAGAGCCCTTCTGTGTCACGGCGGGCTGTGCACCCATGCACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp CTGGACAGCTGGTGGCAGCACGGGACTGAACCTGCTGGGGTCTGCGTCGCTGCGGCCTTGAATTTTCTCTaGCCCATAAGAAAATACAAA +
Preference number: 4 (lower is better)
Translates to: LDSWWQHGTEPAGVCVAAALNFL*PIRKYK
Trigger: TTTGTATTTTCTTATGGGCCAGAGAAAATTCAAGGC...CGCAGCGACGCAGACCCCAGCAGGTTCAGTCCCGTGCTGCCACCAGCTGTCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TTGGGTTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTCTCCTCCATGACTCAAGGCAGCAGTaGCACTGGAGGCCCCGGGGA +
Preference number: 4 (lower is better)
Translates to: LGFCSFHLPRGIQVLLLHDSRQQ*HWRPRG
Trigger: TCCCCGGGGCCTCCAGTGCCACTGCTGCCTTGAGTC...ATGGAGGAGAAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAACCCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp CTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCATAGCTCCCGCTTCTCCTaGGGACTCAAGGCAGCAGTG +
Preference number: 4 (lower is better)
Translates to: LRNWPKVLLLGSRVVRIHSSRFS*GLKAAV
Trigger: CACTGCTGCCTTGAGTCCCCAGGAGAAGCGGGAGCT...ATGAATCCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATCTGAGGTGCTGGGTGTaGTACATGGCGCCTTGCTTC +
Preference number: 4 (lower is better)
Translates to: SPPKLAQSPPSGFKSGQDLRCWV*YMAPCF
Trigger: GAAGCAAGGCGCCATGTACCACACCCAGCACCTCAG...ATCCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TCTGCAATTCACTTCCCTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATTTGGGCTGGGACAACGTaGCGTCCAGAGGAGGGCACA +
Preference number: 4 (lower is better)
Translates to: SAIHFPLPTLHFLLSSEIWAGTT*RPEEGT
Trigger: TGTGCCCTCCTCTGGACGCCACGTTGTCCCAGCCCA...AATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGGGAAGTGAATTGCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TTGGAGGCTTTGGGTTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTAGTAGGAGGGCCGCATaGGGGCCGTGTGGCCAGCAT +
Preference number: 4 (lower is better)
Translates to: LEALGFCSFHLPRGIQVLSRRAA*GPCGQH
Trigger: ATGCTGGCCACACGGCCCCCATGCGGCCCTCCTACT...AAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAACCCAAAGCCTCCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp ACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGGCATAGTGGGAGGTaGTCACTGGCTGTGGCCAGG +
Preference number: 4 (lower is better)
Translates to: TFFSPPKLAQSPPSGFKSGHSGR*SLAVAR
Trigger: CCTGGCCACAGCCAGTGACCACCTCCCACTATGCCC...ACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp AGATCTAGATCAATGTGTGAGGATGTGGGTGCAGACACACACCCACACGACAATGGGCATAGTGGGAGGTaGTCACTGGCTGTGGCCAGG +
Preference number: 4 (lower is better)
Translates to: RSRSMCEDVGADTHPHDNGHSGR*SLAVAR
Trigger: CCTGGCCACAGCCAGTGACCACCTCCCACTATGCCC...ATTGTCGTGTGGGTGTGTGTCTGCACCCACATCCTCACACATTGATCTAGATCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TTGGAGGCTTTGGGTTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTTGGGCTCTTTCCTGCTaGCGTGGAGGTGGGCGAGGC +
Preference number: 4 (lower is better)
Translates to: LEALGFCSFHLPRGIQVLWALSC*RGGGRG
Trigger: GCCTCGCCCACCTCCACGCCAGCAGGAAAGAGCCCA...AAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAACCCAAAGCCTCCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TCTCCTGGCCAGTCTCAGAAGACCCAGGGATCCTCAAAAACCAGGGGAGAAGGAACAAGACTCTCCAAGTaGGCTCTTTCCTGCTGGCGT +
Preference number: 4 (lower is better)
Translates to: SPGQSQKTQGSSKTRGEGTRLSK*ALSCWR
Trigger: ACGCCAGCAGGAAAGAGCCCACTTGGAGAGTCTTGT...TCCTTCTCCCCTGGTTTTTGAGGATCCCTGGGTCTTCTGAGACTGGCCAGGAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp AATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCATGGGTCCGAGGGCTGGGCCTGCTaGCTACAAGACTCTCCAAGT +
Preference number: 4 (lower is better)
Translates to: NWPKVLLLGSRVVRIHGSEGWAC*LQDSPS
Trigger: ACTTGGAGAGTCTTGTAGCCAGCAGGCCCAGCCCTC...GGACCCATGAATCCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp AATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCATGGGTCCTGTTCAATCTCCTGCTaGGAGGCTGCTCGCGGGAAC +
Preference number: 4 (lower is better)
Translates to: NWPKVLLLGSRVVRIHGSCSISC*EAARGN
Trigger: GTTCCCGCGAGCAGCCTCCCAGCAGGAGATTGAACA...GGACCCATGAATCCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp ATGTCCCACGGTGGCTCTGTTTGGTTTGACAACCTACCCCACAGGTGGCCAGAAGGATATAGCCAGATCTaGACTGGGTCAGTGGATGGG +
Preference number: 4 (lower is better)
Translates to: MSHGGSVWFDNLPHRWPEGYSQI*TGSVDG
Trigger: CCCATCCACTGACCCAGTCCAGATCTGGCTATATCC...TTCTGGCCACCTGTGGGGTAGGTTGTCAAACCAAACAGAGCCACCGTGGGACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp CCTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCCTCCGGATATAGCCAGATCTaGACTGGGTCAGTGGATGGG +
Preference number: 4 (lower is better)
Translates to: PLPTLHFLLSSEIGPKSSGYSQI*TGSVDG
Trigger: CCCATCCACTGACCCAGTCCAGATCTGGCTATATCC...GGAGGACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp ACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTCATACTGTCCATCACTaGCCGCCCGCCTCCGCAGAG +
Preference number: 4 (lower is better)
Translates to: TFFSPPKLAQSPPSGFKSHTVHH*PPASAE
Trigger: CTCTGCGGAGGCGGGCGGCCAGTGATGGACAGTATG...ACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp CACATGCGCACACACGTCCTGTGTTACCACTGGCCAAGGAAACGCGAGTCTCAGAGGGGATGTGGCTTCTaGAGACTGGTTCTCATACTG +
Preference number: 4 (lower is better)
Translates to: HMRTHVLCYHWPRKRESQRGCGF*RLVLIL
Trigger: CAGTATGAGAACCAGTCTCCAGAAGCCACATCCCCT...CTGAGACTCGCGTTTCCTTGGCCAGTGGTAACACAGGACGTGTGTGCGCATGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp CCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGGGCTACGAGGGGATGTaGCTTCTGGAGACTGGTTCT +
Preference number: 4 (lower is better)
Translates to: PRCTFFSPPKLAQSPPSGGYEGM*LLETGS
Trigger: AGAACCAGTCTCCAGAAGCCACATCCCCTCGTAGCC...CCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TCTCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGCCCCTCATCTTCCTCTaGCTGGATCCGTCTTCTGGT +
Preference number: 4 (lower is better)
Translates to: SLLRNWPKVLLLGSRVVRPLIFL*LDPSSG
Trigger: ACCAGAAGACGGATCCAGCCAGAGGAAGATGAGGGG...CCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000171887.8
CDS-3UTR CCA 90 bp CCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGATAGGCCTGGGTGGCTaGAGCACTAAAGCTCTTGGG +
Preference number: 4 (lower is better)
Translates to: PRCTFFSPPKLAQSPPSGIGLGG*STKALG
Trigger: CCCAAGAGCTTTAGTGCTCCAGCCACCCAGGCCTAT...CCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp ATGTCCAGGATAAGGAGCATACACCAGGATTTATACACGGTGGCAGCGGCTATACTCCCAGGCACCGTGTaGACGCCAGCCACACTGAAC +
Preference number: 4 (lower is better)
Translates to: MSRIRSIHQDLYTVAAAILPGTV*TPATLN
Trigger: GTTCAGTGTGGCTGGCGTCCACACGGTGCCTGGGAG...TATAGCCGCTGCCACCGTGTATAAATCCTGGTGTATGCTCCTTATCCTGGACAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp ACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTCTCCCAGGCACCGTGTaGACGCCAGCCACACTGAAC +
Preference number: 4 (lower is better)
Translates to: TFFSPPKLAQSPPSGFKSLPGTV*TPATLN
Trigger: GTTCAGTGTGGCTGGCGTCCACACGGTGCCTGGGAG...ACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TCTGCAATTCACTTCCCTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATTCTCCCAGGCACCGTGTaGACGCCAGCCACACTGAAC +
Preference number: 4 (lower is better)
Translates to: SAIHFPLPTLHFLLSSEILPGTV*TPATLN
Trigger: GTTCAGTGTGGCTGGCGTCCACACGGTGCCTGGGAG...AATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGGGAAGTGAATTGCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp GTACAGGAGTGGGGACGCGTCAGTGTACAATACATTCATGTCCAGGATAAGGAGGGTGATGGCTCAAACTaGGACTGCTGGGGGCAGCCA +
Preference number: 4 (lower is better)
Translates to: VQEWGRVSVQYIHVQDKEGDGSN*DCWGQP
Trigger: TGGCTGCCCCCAGCAGTCCCAGTTTGAGCCATCACC...CTCCTTATCCTGGACATGAATGTATTGTACACTGACGCGTCCCCACTCCTGTAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TCTCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGGAAGCCAGTGCCTGGTaGACCCATCATCTGGTGATG +
Preference number: 4 (lower is better)
Translates to: SLLRNWPKVLLLGSRVVREASAW*THHLVM
Trigger: CATCACCAGATGATGGGTCCACCAGGCACTGGCTTC...CCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp AATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCATGGGTCCCACTGCTCTGGGGGCTaGAGACAGTGCTACCATGGA +
Preference number: 4 (lower is better)
Translates to: NWPKVLLLGSRVVRIHGSHCSGG*RQCYHG
Trigger: TCCATGGTAGCACTGTCTCCAGCCCCCAGAGCAGTG...GGACCCATGAATCCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp GAAATCTTTGGCAAGAATATACTGCAGTGCGGAGTGTTGTGTGTGCGTAGGTGTCTGGTAGACCCCTGCTaGGTGCCGACACAGGCTGGG +
Preference number: 4 (lower is better)
Translates to: EIFGKNILQCGVLCVRRCLVDPC*VPTQAG
Trigger: CCCAGCCTGTGTCGGCACCCAGCAGGGGTCTACCAG...ACACCTACGCACACACAACACTCCGCACTGCAGTATATTCTTGCCAAAGATTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp ACAGGGCGATGCCATTGCAGACCCTCCCACTCCTGCTGGGGTCTTTGTAGAAGATGGGGCTTCCAGGGCTaGCTATTGCATTGCTATGAA +
Preference number: 4 (lower is better)
Translates to: TGRCHCRPSHSCWGLCRRWGFQG*LLHCYE
Trigger: TTCATAGCAATGCAATAGCCAGCCCTGGAAGCCCCA...TCTTCTACAAAGACCCCAGCAGGAGTGGGAGGGTCTGCAATGGCATCGCCCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp GTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCATGGGTCCCCTCCCCACAAGTGGGGCTTCCAGGGCTaGCTATTGCATTGCTATGAA +
Preference number: 4 (lower is better)
Translates to: VLLLGSRVVRIHGSPPHKWGFQG*LLHCYE
Trigger: TTCATAGCAATGCAATAGCCAGCCCTGGAAGCCCCA...CTTGTGGGGAGGGGACCCATGAATCCTGACCACTCTTGAACCCAGAAGGAGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TTGATTTCCCCTTGCAAAGCAGTTGAGTTAGGGAGACAGAGCTTTTCCATTCCCTCTGCCGGGACAGTGTaGGTCTCCGATCCTCCGGGG +
Preference number: 4 (lower is better)
Translates to: LISPCKAVELGRQSFSIPSAGTV*VSDPPG
Trigger: CCCCGGAGGATCGGAGACCCACACTGTCCCGGCAGA...GGGAATGGAAAAGCTCTGTCTCCCTAACTCAACTGCTTTGCAAGGGGAAATCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp ACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTCAGGGAAGGAGGGCGTaGAAGGAGCCTGGTAGCCAG +
Preference number: 4 (lower is better)
Translates to: TFFSPPKLAQSPPSGFKSQGRRA*KEPGSQ
Trigger: CTGGCTACCAGGCTCCTTCCACGCCCTCCTTCCCTG...ACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp GTTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTCTCCTCCATCTTTCTGGTGACGGGGAGGTaGCAGGGCTGCTCAGGCCAG +
Preference number: 4 (lower is better)
Translates to: VFAVSIYPGESKFFSSIFLVTGR*QGCSGQ
Trigger: CTGGCCTGAGCAGCCCTGCCACCTCCCCGTCACCAG...AAAGATGGAGGAGAAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TCTCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGCATCCTTCGCTTCTCTaGCAAGGCTGGTGTTGGGCT +
Preference number: 4 (lower is better)
Translates to: SLLRNWPKVLLLGSRVVRHPSLL*QGWCWA
Trigger: AGCCCAACACCAGCCTTGCCAGAGAAGCGAAGGATG...CCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TTGATTTCCCCTTGCAAAGCAGTTGAGTTAGGGAGACAGAGCTTTTCCATTCCCTGCCCCCACTGGGACTaGACATGCCGCTGGCGACAG +
Preference number: 4 (lower is better)
Translates to: LISPCKAVELGRQSFSIPCPHWD*TCRWRQ
Trigger: CTGTCGCCAGCGGCATGTCCAGTCCCAGTGGGGGCA...GGGAATGGAAAAGCTCTGTCTCCCTAACTCAACTGCTTTGCAAGGGGAAATCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp GTTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTCTCCTCCATCTTTCGGTGCTGCCCCCACTaGGACTGGACATGCCGCTGG +
Preference number: 4 (lower is better)
Translates to: VFAVSIYPGESKFFSSIFRCCPH*DWTCRW
Trigger: CCAGCGGCATGTCCAGTCCCAGTGGGGGCAGCACCG...AAAGATGGAGGAGAAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp AATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCATGGGTCCAAGTCGGGCAGAGTGTaGGAGAAGGAGACGGTGCTG +
Preference number: 4 (lower is better)
Translates to: NWPKVLLLGSRVVRIHGSKSGRV*EKETVL
Trigger: CAGCACCGTCTCCTTCTCCCACACTCTGCCCGACTT...GGACCCATGAATCCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp CCTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCCTCCCTCCGGGCTGTTGTCTaGCATGGAGTACTTGGAGAA +
Preference number: 4 (lower is better)
Translates to: PLPTLHFLLSSEIGPKSSLRAVV*HGVLGE
Trigger: TTCTCCAAGTACTCCATGCCAGACAACAGCCCGGAG...GGAGGACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp GCAATTCACTTCCCTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCCGATGGCCTGCTCCCTaGAGATCTCAGGCTTGTACC +
Preference number: 4 (lower is better)
Translates to: AIHFPLPTLHFLLSSEIGRWPAP*RSQACT
Trigger: GGTACAAGCCTGAGATCTCCAGGGAGCAGGCCATCG...GCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGGGAAGTGAATTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TTGGAGGCTTTGGGTTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTAAGGCCCCCGGCTCCTaGTCCTTGAGGAGCGCGATG +
Preference number: 4 (lower is better)
Translates to: LEALGFCSFHLPRGIQVLKAPGS*SLRSAM
Trigger: CATCGCGCTCCTCAAGGACCAGGAGCCGGGGGCCTT...AAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAACCCAAAGCCTCCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TCTAGATCAATGTGTGAGGATGTGGGTGCAGACACACACCCACACGACAATATAAAGGCCCCCGGCTCCTaGTCCTTGAGGAGCGCGATG +
Preference number: 4 (lower is better)
Translates to: SRSMCEDVGADTHPHDNIKAPGS*SLRSAM
Trigger: CATCGCGCTCCTCAAGGACCAGGAGCCGGGGGCCTT...TATATTGTCGTGTGGGTGTGTGTCTGCACCCACATCCTCACACATTGATCTAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TCTCCTGGCCAGTCTCAGAAGACCCAGGGATCCTCAAAAACCAGGGGAGAAGGACATGATGGTTGGAGGTaGCGAAGACACCTTCATGGC +
Preference number: 4 (lower is better)
Translates to: SPGQSQKTQGSSKTRGEGHDGWR*RRHLHG
Trigger: GCCATGAAGGTGTCTTCGCCACCTCCAACCATCATG...TCCTTCTCCCCTGGTTTTTGAGGATCCCTGGGTCTTCTGAGACTGGCCAGGAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp ATGTCCCACGGTGGCTCTGTTTGGTTTGACAACCTACCCCACAGGTGGCCAGAACATGATGGTTGGAGGTaGCGAAGACACCTTCATGGC +
Preference number: 4 (lower is better)
Translates to: MSHGGSVWFDNLPHRWPEHDGWR*RRHLHG
Trigger: GCCATGAAGGTGTCTTCGCCACCTCCAACCATCATG...TTCTGGCCACCTGTGGGGTAGGTTGTCAAACCAAACAGAGCCACCGTGGGACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp ATGTCCCACGGTGGCTCTGTTTGGTTTGACAACCTACCCCACAGGTGGCCAGAACTGCTGCATGATGGTTaGAGGTGGCGAAGACACCTT +
Preference number: 4 (lower is better)
Translates to: MSHGGSVWFDNLPHRWPELLHDG*RWRRHL
Trigger: AAGGTGTCTTCGCCACCTCCAACCATCATGCAGCAG...TTCTGGCCACCTGTGGGGTAGGTTGTCAAACCAAACAGAGCCACCGTGGGACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp CCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGCAGCGATCCGAAGTTTaGCTCATTGGGGCAGCCCTT +
Preference number: 4 (lower is better)
Translates to: PRCTFFSPPKLAQSPPSGQRSEV*LIGAAL
Trigger: AAGGGCTGCCCCAATGAGCCAAACTTCGGATCGCTG...CCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp CCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGGCAAGGCAGGGCCAATaGGATGATGGAGTGCTGGTA +
Preference number: 4 (lower is better)
Translates to: PRCTFFSPPKLAQSPPSGARQGQ*DDGVLV
Trigger: TACCAGCACTCCATCATCCCATTGGCCCTGCCTTGC...CCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp AGATCTAGATCAATGTGTGAGGATGTGGGTGCAGACACACACCCACACGACAATTGGTGGCAGCTGGCGTaGGGTCTGCAGCCAACGTCT +
Preference number: 4 (lower is better)
Translates to: RSRSMCEDVGADTHPHDNWWQLA*GLQPTS
Trigger: AGACGTTGGCTGCAGACCCCACGCCAGCTGCCACCA...ATTGTCGTGTGGGTGTGTGTCTGCACCCACATCCTCACACATTGATCTAGATCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp GCAATTCACTTCCCTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCAGCTCAGCAAAGAGGTaGCAGGCGTTGTCCGTGGTG +
Preference number: 4 (lower is better)
Translates to: AIHFPLPTLHFLLSSEIGSSAKR*QALSVV
Trigger: CACCACGGACAACGCCTGCCACCTCTTTGCTGAGCT...GCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGGGAAGTGAATTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp AATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCATGGGTCCAGCTCAGCAAAGAGGTaGCAGGCGTTGTCCGTGGTG +
Preference number: 4 (lower is better)
Translates to: NWPKVLLLGSRVVRIHGSSSAKR*QALSVV
Trigger: CACCACGGACAACGCCTGCCACCTCTTTGCTGAGCT...GGACCCATGAATCCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp AATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCATGGGTCCCAGAGGCCGGCTGGTTaGGGTCAAGCTCAGCAAAGA +
Preference number: 4 (lower is better)
Translates to: NWPKVLLLGSRVVRIHGSQRPAG*GQAQQR
Trigger: TCTTTGCTGAGCTTGACCCCAACCAGCCGGCCTCTG...GGACCCATGAATCCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp CTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCATATGGCAGAGGCCGGCTaGTTGGGGTCAAGCTCAGCA +
Preference number: 4 (lower is better)
Translates to: LRNWPKVLLLGSRVVRIHMAEAG*LGSSSA
Trigger: TGCTGAGCTTGACCCCAACCAGCCGGCCTCTGCCAT...ATGAATCCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp GTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCATGGGTCCCCTCCCCACAAGAGGGTTCATCTCTTTTaGCCGGCATTCAGCATGACC +
Preference number: 4 (lower is better)
Translates to: VLLLGSRVVRIHGSPPHKRVHLF*PAFSMT
Trigger: GGTCATGCTGAATGCCGGCCAAAAGAGATGAACCCT...CTTGTGGGGAGGGGACCCATGAATCCTGACCACTCTTGAACCCAGAAGGAGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp ACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTCCATGGCACTGGCCCTaGGCAAGGGGCAGGGTTCAT +
Preference number: 4 (lower is better)
Translates to: TFFSPPKLAQSPPSGFKSPWHWP*ARGRVH
Trigger: ATGAACCCTGCCCCTTGCCCAGGGCCAGTGCCATGG...ACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TGCAGGCACCAGGAGAGAGCCTCTGTCACCCATAGCTTGGTTGTTTGTCCCTCCTTCTGGGTTCAAGAGTaGTCAGGATTCATGGGTCCC +
Preference number: 4 (lower is better)
Translates to: CRHQERASVTHSLVVCPSFWVQE*SGFMGP
Trigger: GGGACCCATGAATCCTGACCACTCTTGAACCCAGAA...GGAGGGACAAACAACCAAGCTATGGGTGACAGAGGCTCTCTCCTGGTGCCTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp CGATGCCATTGCAGACCCTCCCACTCCTGCTGGGGTCTTTGTAGAAGAGAAGGGCCAAAGTCCTCCTTCTaGGTTCAAGAGTGGTCAGGA +
Preference number: 4 (lower is better)
Translates to: RCHCRPSHSCWGLCRREGPKSSF*VQEWSG
Trigger: TCCTGACCACTCTTGAACCCAGAAGGAGGACTTTGG...CCCTTCTCTTCTACAAAGACCCCAGCAGGAGTGGGAGGGTCTGCAATGGCATCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp GTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCATGGGTCCCCTCCCCACAAGTCTCTCCTCCGAAATTaGCCCAAAGTCCTCCTTCTG +
Preference number: 4 (lower is better)
Translates to: VLLLGSRVVRIHGSPPHKSLLRN*PKVLLL
Trigger: CAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGAGA...CTTGTGGGGAGGGGACCCATGAATCCTGACCACTCTTGAACCCAGAAGGAGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TGCAGGCACCAGGAGAGAGCCTCTGTCACCCATAGCTTGGTTGTTTGTCCCTCCGTGTCTACAAACACATaGGACAAGGACAAGCCGAGC +
Preference number: 4 (lower is better)
Translates to: CRHQERASVTHSLVVCPSVSTNT*DKDKPS
Trigger: GCTCGGCTTGTCCTTGTCCCATGTGTTTGTAGACAC...GGAGGGACAAACAACCAAGCTATGGGTGACAGAGGCTCTCTCCTGGTGCCTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp GGGGAAGACACCCCGAGCTCAACAGCTGCCTGTTCTGACAGATCTCTTCCTATGCCCTCCCACTCCTGCTaGGGTCTTTGTAGAAGAGAA +
Preference number: 4 (lower is better)
Translates to: GEDTPSSTAACSDRSLPMPSHSC*GLCRRE
Trigger: TTCTCTTCTACAAAGACCCCAGCAGGAGTGGGAGGG...CATAGGAAGAGATCTGTCAGAACAGGCAGCTGTTGAGCTCGGGGTGTCTTCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp ATGCGCACACACGTCCTGTGTTACCACTGGCCAAGGAAACGCGAGTCTCAGGATCCCTCCCACTCCTGCTaGGGTCTTTGTAGAAGAGAA +
Preference number: 4 (lower is better)
Translates to: MRTHVLCYHWPRKRESQDPSHSC*GLCRRE
Trigger: TTCTCTTCTACAAAGACCCCAGCAGGAGTGGGAGGG...ATCCTGAGACTCGCGTTTCCTTGGCCAGTGGTAACACAGGACGTGTGTGCGCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp CCCAGCTTGATTTCCCCTTGCAAAGCAGTTGAGTTAGGGAGACAGAGCTTTTCCCTGGGAGCTGACTGCTaGGCCCCTGGCTTGCTGAAA +
Preference number: 4 (lower is better)
Translates to: PSLISPCKAVELGRQSFSLGADC*APGLLK
Trigger: TTTCAGCAAGCCAGGGGCCCAGCAGTCAGCTCCCAG...GGAAAAGCTCTGTCTCCCTAACTCAACTGCTTTGCAAGGGGAAATCAAGCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp GGCTTCTGGCCAAGGCAGGACAGGGCGATGCCATTGCAGACCCTCCCACTCCTGATCTTGGAAGATAATTaGGGTTTGCTAGGGAATGAG +
Preference number: 4 (lower is better)
Translates to: GFWPRQDRAMPLQTLPLLILEDN*GLLGNE
Trigger: CTCATTCCCTAGCAAACCCCAATTATCTTCCAAGAT...CAGGAGTGGGAGGGTCTGCAATGGCATCGCCCTGTCCTGCCTTGGCCAGAAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp CCAAGGCAGGACAGGGCGATGCCATTGCAGACCCTCCCACTCCTGCTGGGGTCTTACAAAGGAAGGGGATaGGAAATATCTCCTATCTTG +
Preference number: 4 (lower is better)
Translates to: PRQDRAMPLQTLPLLLGSYKGRG*EISPIL
Trigger: CAAGATAGGAGATATTTCCCATCCCCTTCCTTTGTA...AGACCCCAGCAGGAGTGGGAGGGTCTGCAATGGCATCGCCCTGTCCTGCCTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp CTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCATACCCAGCTGGACAGCTaGTGGCAGCACGGGACTGAA +
Preference number: 4 (lower is better)
Translates to: LRNWPKVLLLGSRVVRIHTQLDS*WQHGTE
Trigger: TTCAGTCCCGTGCTGCCACCAGCTGTCCAGCTGGGT...ATGAATCCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp CCATTCTGGCTTAGAGTCCTTAAATGGTGGTCAGGTGTTTTCCCAACTGTCCAGCTCCAGACACCCAGCTaGACAGCTGGTGGCAGCACG +
Preference number: 4 (lower is better)
Translates to: PFWLRVLKWWSGVFPTVQLQTPS*TAGGST
Trigger: CGTGCTGCCACCAGCTGTCCAGCTGGGTGTCTGGAG...CTGGACAGTTGGGAAAACACCTGACCACCATTTAAGGACTCTAAGCCAGAATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp CGATGCCATTGCAGACCCTCCCACTCCTGCTGGGGTCTTTGTAGAAGAGAAGGGGACGCTCAGATGACATaGGTCAAAGGCCTTTCCCAA +
Preference number: 4 (lower is better)
Translates to: RCHCRPSHSCWGLCRREGDAQMT*VKGLSQ
Trigger: TTGGGAAAGGCCTTTGACCCATGTCATCTGAGCGTC...CCCTTCTCTTCTACAAAGACCCCAGCAGGAGTGGGAGGGTCTGCAATGGCATCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TGCAGGCACCAGGAGAGAGCCTCTGTCACCCATAGCTTGGTTGTTTGTCCCTCCAGGAATCCTGGCCATTaGTGTCCACAGCTTTCAGAG +
Preference number: 4 (lower is better)
Translates to: CRHQERASVTHSLVVCPSRNPGH*CPQLSE
Trigger: CTCTGAAAGCTGTGGACACCAATGGCCAGGATTCCT...GGAGGGACAAACAACCAAGCTATGGGTGACAGAGGCTCTCTCCTGGTGCCTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp ACCCTCCTTTCCAACTCCCTGAAACAGAACGTCCACACTGACACAGCTCCTTGGGGGGAGAAGGAATCCTaGCCATTGGTGTCCACAGCT +
Preference number: 4 (lower is better)
Translates to: TLLSNSLKQNVHTDTAPWGEKES*PLVSTA
Trigger: AGCTGTGGACACCAATGGCCAGGATTCCTTCTCCCC...CCAAGGAGCTGTGTCAGTGTGGACGTTCTGTTTCAGGGAGTTGGAAAGGAGGGT
54% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp CTTCCCTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCTCCAGGAGGCAGGGGTaGTGGACAAAAGTAGGAGTG +
Preference number: 4 (lower is better)
Translates to: LPSPHVALSSLLRNWPKVSRRQG*WTKVGV
Trigger: CACTCCTACTTTTGTCCACCACCCCTGCCTCCTGGA...GACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGGGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TGGTCAGGTGTTTTCCCAACTGTCCAGTGGACCTTAGGCCCTTTGGCCCAAGTGGTCCTGTGTTACCACTaGCCAAGGAAACGCGAGTCT +
Preference number: 4 (lower is better)
Translates to: WSGVFPTVQWTLGPLAQVVLCYH*PRKRES
Trigger: AGACTCGCGTTTCCTTGGCCAGTGGTAACACAGGAC...CACTTGGGCCAAAGGGCCTAAGGTCCACTGGACAGTTGGGAAAACACCTGACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp GTGAGGAAGGGAAAAGCGACCGTGAAAGCTGACCCCAGACTCAGTCCTGGGCCCGGTCCTCCAACATTTTaGACATTTGAGGACAGAGGT +
Preference number: 4 (lower is better)
Translates to: VRKGKATVKADPRLSPGPGPPTF*TFEDRG
Trigger: ACCTCTGTCCTCAAATGTCCAAAATGTTGGAGGACC...GGGCCCAGGACTGAGTCTGGGGTCAGCTTTCACGGTCGCTTTTCCCTTCCTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TTCCTTCGCAGGTCCCCTCTCCATTGTTTTCTCGCCCAATCCTTCCCTCTTGCTGCAGCTGTACAGGAGTaGGGACGCGTCAGTGTACAA +
Preference number: 4 (lower is better)
Translates to: FLRRSPLHCFLAQSFPLAAAVQE*GRVSVQ
Trigger: TTGTACACTGACGCGTCCCCACTCCTGTACAGCTGC...AGCAAGAGGGAAGGATTGGGCGAGAAAACAATGGAGAGGGGACCTGCGAAGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp CGATGCCATTGCAGACCCTCCCACTCCTGCTGGGGTCTTTGTAGAAGAGAAGGGTGTAGCCTTGGAATGTaGGAGGTTCCAGGACTCCAT +
Preference number: 4 (lower is better)
Translates to: RCHCRPSHSCWGLCRREGCSLGM*EVPGLH
Trigger: ATGGAGTCCTGGAACCTCCCACATTCCAAGGCTACA...CCCTTCTCTTCTACAAAGACCCCAGCAGGAGTGGGAGGGTCTGCAATGGCATCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446688.5
CDS-3UTR CCA 90 bp CAAACATCCCCAGCACAACGACCAATTAGGCTGGCAGCCACTGAAACCTCAGAACTCAGCGCCCGGGGATaGAGGAGTGCTTTTCACAAG +
Preference number: 4 (lower is better)
Translates to: QTSPAQRPIRLAATETSELSARG*RSAFHK
Trigger: CTTGTGAAAAGCACTCCTCCATCCCCGGGCGCTGAG...TTCTGAGGTTTCAGTGGCTGCCAGCCTAATTGGTCGTTGTGCTGGGGATGTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000453356.1
CDS-3UTR CCA 90 bp TTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTCTCCTCCATCTTTCGCAGAGTTCCGGGGTTaGGGCGGGGTAGGAAGGCGG +
Preference number: 4 (lower is better)
Translates to: FLQFPSTQGNPSSSPPSFAEFRG*GGVGRR
Trigger: CCGCCTTCCTACCCCGCCCCAACCCCGGAACTCTGC...GAAAGATGGAGGAGAAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000646520.1
CDS-3UTR CCA 90 bp AGATCTAGATCAATGTGTGAGGATGTGGGTGCAGACACACACCCACACGACAATTCCAGATCCTCTGGCTaGCTGCGGAGGCAGAAGCGC +
Preference number: 4 (lower is better)
Translates to: RSRSMCEDVGADTHPHDNSRSSG*LRRQKR
Trigger: GCGCTTCTGCCTCCGCAGCCAGCCAGAGGATCTGGA...ATTGTCGTGTGGGTGTGTGTCTGCACCCACATCCTCACACATTGATCTAGATCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646520.1
CDS-3UTR CCA 90 bp ACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGCCTCCAGATCCTCTaGCTGGCTGCGGAGGCAGAA +
Preference number: 4 (lower is better)
Translates to: TFFSPPKLAQSPPSGFKSGLQIL*LAAEAE
Trigger: TTCTGCCTCCGCAGCCAGCCAGAGGATCTGGAGGCC...ACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646520.1
CDS-3UTR CCA 90 bp TCTAGATCAATGTGTGAGGATGTGGGTGCAGACACACACCCACACGACAATATACCACCACGCAGATGGTaGGGAGGCCGCTGGGAGGAT +
Preference number: 4 (lower is better)
Translates to: SRSMCEDVGADTHPHDNIPPRRW*GGRWED
Trigger: ATCCTCCCAGCGGCCTCCCCACCATCTGCGTGGTGG...TATATTGTCGTGTGGGTGTGTGTCTGCACCCACATCCTCACACATTGATCTAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646520.1
CDS-3UTR CCA 90 bp TTGGAGGCTTTGGGTTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTGAACCACCACGCAGATaGTGGGGAGGCCGCTGGGAG +
Preference number: 4 (lower is better)
Translates to: LEALGFCSFHLPRGIQVLEPPRR*WGGRWE
Trigger: CTCCCAGCGGCCTCCCCACCATCTGCGTGGTGGTTC...AAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAACCCAAAGCCTCCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000646520.1
CDS-3UTR TCA 90 bp GTTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTCTCCTCCATCTTTGCTGGACACTCGGGGTaGCCCTGGTGGAGCCGTTGT +
Preference number: 4 (lower is better)
Translates to: VFAVSIYPGESKFFSSIFAGHSG*PWWSRC
Trigger: ACAACGGCTCCACCAGGGTCACCCCGAGTGTCCAGC...AAAGATGGAGGAGAAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp CACAGGGCAGAGTCCAGGAGCCAGAACACTTCCTTGGCTTGGAAAAGGAAAAAGTCACACTCATGTTTCTaGTGGGCTGGAGGTGGGGCT +
Preference number: 4 (lower is better)
Translates to: HRAESRSQNTSLAWKRKKSHSCF*WAGGGA
Trigger: AGCCCCACCTCCAGCCCATCAGAAACATGAGTGTGA...CTTTTTCCTTTTCCAAGCCAAGGAAGTGTTCTGGCTCCTGGACTCTGCCCTGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000310858.10
CDS-3UTR TCA 90 bp CACAGGGCAGAGTCCAGGAGCCAGAACACTTCCTTGGCTTGGAAAAGGAAAAAGCTCCATGTTTGGACTTaGGCATCTGCGCCACCTCAC +
Preference number: 4 (lower is better)
Translates to: HRAESRSQNTSLAWKRKKLHVWT*ASAPPH
Trigger: GTGAGGTGGCGCAGATGCTCAAGTCCAAACATGGAG...CTTTTTCCTTTTCCAAGCCAAGGAAGTGTTCTGGCTCCTGGACTCTGCCCTGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310858.10
CDS-3UTR TCA 90 bp CTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCATTGGCATGGAGCTTCGTaGTGTCAGGTCTCCGCTCAG +
Preference number: 4 (lower is better)
Translates to: LRNWPKVLLLGSRVVRIHWHGAS*CQVSAQ
Trigger: CTGAGCGGAGACCTGACATCACGAAGCTCCATGCCA...ATGAATCCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp CGATGCCATTGCAGACCCTCCCACTCCTGCTGGGGTCTTTGTAGAAGAGAAGGGAGAACAACGACATTGTaGGGGTCTGCATTGAGCCAT +
Preference number: 4 (lower is better)
Translates to: RCHCRPSHSCWGLCRREGRTTTL*GSALSH
Trigger: ATGGCTCAATGCAGACCCTCACAATGTCGTTGTTCT...CCCTTCTCTTCTACAAAGACCCCAGCAGGAGTGGGAGGGTCTGCAATGGCATCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp GGGCGATGCCATTGCAGACCCTCCCACTCCTGCTGGGGTCTTTGTAGAAGAGAAAGAACAACGACATTGTaGGGGTCTGCATTGAGCCAT +
Preference number: 4 (lower is better)
Translates to: GRCHCRPSHSCWGLCRRERTTTL*GSALSH
Trigger: ATGGCTCAATGCAGACCCTCACAATGTCGTTGTTCT...TTCTCTTCTACAAAGACCCCAGCAGGAGTGGGAGGGTCTGCAATGGCATCGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp GACAGGAGCCCCAACATGAAGTTCTCAGTGCAAAGCTTTGGATTCTGGCTTGGCGCATGTAAGCCGCGATaGCAACTCCTATCCTGCCTC +
Preference number: 4 (lower is better)
Translates to: DRSPNMKFSVQSFGFWLGACKPR*QLLSCL
Trigger: GAGGCAGGATAGGAGTTGTCATCGCGGCTTACATGC...GCCAAGCCAGAATCCAAAGCTTTGCACTGAGAACTTCATGTTGGGGCTCCTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310858.10
CDS-3UTR TCA 90 bp AATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCATGGGTCCGCATGTAAGCCGCGATaGCAACTCCTATCCTGCCTC +
Preference number: 4 (lower is better)
Translates to: NWPKVLLLGSRVVRIHGSACKPR*QLLSCL
Trigger: GAGGCAGGATAGGAGTTGTCATCGCGGCTTACATGC...GGACCCATGAATCCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp TCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATGCATGTAAGCCGCGATaGCAACTCCTATCCTGCCTC +
Preference number: 4 (lower is better)
Translates to: SPPKLAQSPPSGFKSGQDACKPR*QLLSCL
Trigger: GAGGCAGGATAGGAGTTGTCATCGCGGCTTACATGC...ATCCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp GACAGGAGCCCCAACATGAAGTTCTCAGTGCAAAGCTTTGGATTCTGGCTTGGCCGGAGAGCAGGCCACTaGAGTAATGCACGTACCTTC +
Preference number: 4 (lower is better)
Translates to: DRSPNMKFSVQSFGFWLGRRAGH*SNARTF
Trigger: GAAGGTACGTGCATTACTTCAGTGGCCTGCTCTCCG...GCCAAGCCAGAATCCAAAGCTTTGCACTGAGAACTTCATGTTGGGGCTCCTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310858.10
CDS-3UTR TCA 90 bp TCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATCGGAGAGCAGGCCACTaGAGTAATGCACGTACCTTC +
Preference number: 4 (lower is better)
Translates to: SPPKLAQSPPSGFKSGQDRRAGH*SNARTF
Trigger: GAAGGTACGTGCATTACTTCAGTGGCCTGCTCTCCG...ATCCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp GACAGGAGCCCCAACATGAAGTTCTCAGTGCAAAGCTTTGGATTCTGGCTTGGCTGGGGATGCCGTGCATaGTCACGTGGTGCAGAAACA +
Preference number: 4 (lower is better)
Translates to: DRSPNMKFSVQSFGFWLGWGCRA*SRGAET
Trigger: TGTTTCTGCACCACGTGATCATGCACGGCATCCCCA...GCCAAGCCAGAATCCAAAGCTTTGCACTGAGAACTTCATGTTGGGGCTCCTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310858.10
CDS-3UTR TCA 90 bp AATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCATGGGTCCTGGGGATGCCGTGCATaGTCACGTGGTGCAGAAACA +
Preference number: 4 (lower is better)
Translates to: NWPKVLLLGSRVVRIHGSWGCRA*SRGAET
Trigger: TGTTTCTGCACCACGTGATCATGCACGGCATCCCCA...GGACCCATGAATCCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp GCAATTCACTTCCCTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCCATCTCGATGCCCACTaGAGTTGTCGTAGGAGTCCC +
Preference number: 4 (lower is better)
Translates to: AIHFPLPTLHFLLSSEIGHLDAH*SCRRSP
Trigger: GGGACTCCTACGACAACTTCAGTGGGCATCGAGATG...GCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGGGAAGTGAATTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp GACAGGAGCCCCAACATGAAGTTCTCAGTGCAAAGCTTTGGATTCTGGCTTGGCCATCTCGATGCCCACTaGAGTTGTCGTAGGAGTCCC +
Preference number: 4 (lower is better)
Translates to: DRSPNMKFSVQSFGFWLGHLDAH*SCRRSP
Trigger: GGGACTCCTACGACAACTTCAGTGGGCATCGAGATG...GCCAAGCCAGAATCCAAAGCTTTGCACTGAGAACTTCATGTTGGGGCTCCTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310858.10
CDS-3UTR TCA 90 bp ACATCCCCAGCACAACGACCAATTAGGCTGGCAGCCACTGAAACCTCAGAACAACATCTCGATGCCCACTaGAGTTGTCGTAGGAGTCCC +
Preference number: 4 (lower is better)
Translates to: TSPAQRPIRLAATETSEQHLDAH*SCRRSP
Trigger: GGGACTCCTACGACAACTTCAGTGGGCATCGAGATG...TTGTTCTGAGGTTTCAGTGGCTGCCAGCCTAATTGGTCGTTGTGCTGGGGATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453356.1
CDS-3UTR TCA 90 bp TCTGCAATTCACTTCCCTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATTGCCCCACCATTGACATaGACCTGGGCTGGGACAACG +
Preference number: 4 (lower is better)
Translates to: SAIHFPLPTLHFLLSSEIAPPLT*TWAGTT
Trigger: CGTTGTCCCAGCCCAGGTTCATGTCAATGGTGGGGC...AATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGGGAAGTGAATTGCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp GTACAGGAGTGGGGACGCGTCAGTGTACAATACATTCATGTCCAGGATAAGGAGCCTCACTGGTGTTGGTaGCCCCGTCCAGAGAAGAGA +
Preference number: 4 (lower is better)
Translates to: VQEWGRVSVQYIHVQDKEPHWCW*PRPEKR
Trigger: TCTCTTCTCTGGACGGGGTCACCAACACCAGTGAGG...CTCCTTATCCTGGACATGAATGTATTGTACACTGACGCGTCCCCACTCCTGTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp CCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGGCTTCCGAAAAGGATTaGGAGCGGAACATACCGCTG +
Preference number: 4 (lower is better)
Translates to: PRCTFFSPPKLAQSPPSGASEKD*ERNIPL
Trigger: CAGCGGTATGTTCCGCTCTCAATCCTTTTCGGAAGC...CCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp ATGTCCCACGGTGGCTCTGTTTGGTTTGACAACCTACCCCACAGGTGGCCAGAACTGATAGTCATAAGGTaGGTAAGACCTGCCAGGAGG +
Preference number: 4 (lower is better)
Translates to: MSHGGSVWFDNLPHRWPELIVIR*VRPARR
Trigger: CCTCCTGGCAGGTCTTACTCACCTTATGACTATCAG...TTCTGGCCACCTGTGGGGTAGGTTGTCAAACCAAACAGAGCCACCGTGGGACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp GGGGAAGACACCCCGAGCTCAACAGCTGCCTGTTCTGACAGATCTCTTCCTATGAGAGGCTGGGCTCTTTaGATGGAAATCCTGGTTAGG +
Preference number: 4 (lower is better)
Translates to: GEDTPSSTAACSDRSLPMRGWAL*MEILVR
Trigger: CCTAACCAGGATTTCCATTCAAAGAGCCCAGCCTCT...CATAGGAAGAGATCTGTCAGAACAGGCAGCTGTTGAGCTCGGGGTGTCTTCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp AGGTGCCTTGGGTCTGAGATACTTTCAAGCAAACAAGTTCTTCCACTTGATGTCTTGGGCTCAGAGTCCTaGGCTCGGGGTCCAGCCACC +
Preference number: 4 (lower is better)
Translates to: RCLGSEILSSKQVLPLDVLGSES*ARGPAT
Trigger: GGTGGCTGGACCCCGAGCTCAGGACTCTGAGCCCAA...GACATCAAGTGGAAGAACTTGTTTGCTTGAAAGTATCTCAGACCCAAGGCACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp CCCAGCTTGATTTCCCCTTGCAAAGCAGTTGAGTTAGGGAGACAGAGCTTTTCCCGGGAAACTCCCCACTaGAGTGCTGTCAGCACTGAG +
Preference number: 4 (lower is better)
Translates to: PSLISPCKAVELGRQSFSRETPH*SAVSTE
Trigger: CTCAGTGCTGACAGCACTTCAGTGGGGAGTTTCCCG...GGAAAAGCTCTGTCTCCCTAACTCAACTGCTTTGCAAGGGGAAATCAAGCTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp TTGATTTCCCCTTGCAAAGCAGTTGAGTTAGGGAGACAGAGCTTTTCCATTCCCCTGTCCCAGGCTGCCTaGGCGGAAGCCAGACTCCAA +
Preference number: 4 (lower is better)
Translates to: LISPCKAVELGRQSFSIPLSQAA*AEARLQ
Trigger: TTGGAGTCTGGCTTCCGCTCAGGCAGCCTGGGACAG...GGGAATGGAAAAGCTCTGTCTCCCTAACTCAACTGCTTTGCAAGGGGAAATCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp CCAGAACACCGTGATAGCAGGCTGATCAAACCGCTCACTTCCTCCCTGTTTTCCGCTGAAATGCTGAAGTaGGTAGTCGGGGCTGCTGTA +
Preference number: 4 (lower is better)
Translates to: PEHRDSRLIKPLTSSLFSAEMLK*VVGAAV
Trigger: TACAGCAGCCCCGACTACTCACTTCAGCATTTCAGC...GGAAAACAGGGAGGAAGTGAGCGGTTTGATCAGCCTGCTATCACGGTGTTCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp TTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTCTCCTCCATCTTTCGGACGCCAGCCACACTaGACTGAGCTCGAGCCTGGC +
Preference number: 4 (lower is better)
Translates to: FLQFPSTQGNPSSSPPSFGRQPH*TELEPG
Trigger: GCCAGGCTCGAGCTCAGTTCAGTGTGGCTGGCGTCC...GAAAGATGGAGGAGAAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp GTTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTCTCCTCCATCTTTCAGCCATGCTGGGATTaGTGGCCCGCCAGCCGAAGC +
Preference number: 4 (lower is better)
Translates to: VFAVSIYPGESKFFSSIFQPCWD*WPASRS
Trigger: GCTTCGGCTGGCGGGCCATCAATCCCAGCATGGCTG...AAAGATGGAGGAGAAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp TCTCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGGCTATTGCATTGCTATaGAGACCGGAGGCCAGGTTG +
Preference number: 4 (lower is better)
Translates to: SLLRNWPKVLLLGSRVVRAIALL*RPEARL
Trigger: CAACCTGGCCTCCGGTCTTCATAGCAATGCAATAGC...CCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp GTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCATGGGTCCCCTCCCCACAAGTTTTATTCTGCTGCATaGTGGTTGGAGGTGGCGAAG +
Preference number: 4 (lower is better)
Translates to: VLLLGSRVVRIHGSPPHKFYSAA*WLEVAK
Trigger: CTTCGCCACCTCCAACCATCATGCAGCAGAATAAAA...CTTGTGGGGAGGGGACCCATGAATCCTGACCACTCTTGAACCCAGAAGGAGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp GTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCATGGGTCCCCTCCCCACAAGCTATCAGAAAATGCCTaGCCAGCTCATGGGTCATGT +
Preference number: 4 (lower is better)
Translates to: VLLLGSRVVRIHGSPPHKLSENA*PAHGSC
Trigger: ACATGACCCATGAGCTGGTCAGGCATTTTCTGATAG...CTTGTGGGGAGGGGACCCATGAATCCTGACCACTCTTGAACCCAGAAGGAGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp CCAGAACACCGTGATAGCAGGCTGATCAAACCGCTCACTTCCTCCCTGTTTTCCCCATGTCCACAGAGTTaGCGAAGAGCACATTGCAGG +
Preference number: 4 (lower is better)
Translates to: PEHRDSRLIKPLTSSLFSPCPQS*RRAHCR
Trigger: CCTGCAATGTGCTCTTCGTCAACTCTGTGGACATGG...GGAAAACAGGGAGGAAGTGAGCGGTTTGATCAGCCTGCTATCACGGTGTTCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp TCTCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGGGTTGTCAGTCAGAGTaGTTCCCTGGGCAGAGACTT +
Preference number: 4 (lower is better)
Translates to: SLLRNWPKVLLLGSRVVRGCQSE*FPGQRL
Trigger: AAGTCTCTGCCCAGGGAATCACTCTGACTGACAACC...CCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp CTTCCCTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCGGTTGTCAGTCAGAGTaGTTCCCTGGGCAGAGACTT +
Preference number: 4 (lower is better)
Translates to: LPSPHVALSSLLRNWPKVGCQSE*FPGQRL
Trigger: AAGTCTCTGCCCAGGGAATCACTCTGACTGACAACC...GACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGGGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp GGGGAAGACACCCCGAGCTCAACAGCTGCCTGTTCTGACAGATCTCTTCCTATGGAGGGTAGTGGCGTCTaGAAAAGAGCTTTCTCTGGT +
Preference number: 4 (lower is better)
Translates to: GEDTPSSTAACSDRSLPMEGSGV*KRAFSG
Trigger: ACCAGAGAAAGCTCTTTTTCAGACGCCACTACCCTC...CATAGGAAGAGATCTGTCAGAACAGGCAGCTGTTGAGCTCGGGGTGTCTTCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp CCATTCTGGCTTAGAGTCCTTAAATGGTGGTCAGGTGTTTTCCCAACTGTCCAGCCTTGGAGACGAAGTTaGCGATGGCAGAGGCCGGCT +
Preference number: 4 (lower is better)
Translates to: PFWLRVLKWWSGVFPTVQPWRRS*RWQRPA
Trigger: AGCCGGCCTCTGCCATCGTCAACTTCGTCTCCAAGG...CTGGACAGTTGGGAAAACACCTGACCACCATTTAAGGACTCTAAGCCAGAATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp CCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGACAAGTTCTTCCACTTaGTGTCCCACGGTGGCTCTG +
Preference number: 4 (lower is better)
Translates to: PRCTFFSPPKLAQSPPSGTSSST*CPTVAL
Trigger: CAGAGCCACCGTGGGACATCAAGTGGAAGAACTTGT...CCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp ACAGGGCGATGCCATTGCAGACCCTCCCACTCCTGCTGGGGTCTTTGTAGAAGAAACAGCTGCCTGTTCTaGCAGATCTCTTCCTATGGA +
Preference number: 4 (lower is better)
Translates to: TGRCHCRPSHSCWGLCRRNSCLF*QISSYG
Trigger: TCCATAGGAAGAGATCTGTCAGAACAGGCAGCTGTT...TCTTCTACAAAGACCCCAGCAGGAGTGGGAGGGTCTGCAATGGCATCGCCCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp TCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATACAGAACGTCCACACTaGCACAGCTCCTTGGAGGAG +
Preference number: 4 (lower is better)
Translates to: SPPKLAQSPPSGFKSGQDTERPH*HSSLEE
Trigger: CTCCTCCAAGGAGCTGTGTCAGTGTGGACGTTCTGT...ATCCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp ATGTCCCACGGTGGCTCTGTTTGGTTTGACAACCTACCCCACAGGTGGCCAGAATCCTTTCCAACTCCCTaGAACAGAACGTCCACACTG +
Preference number: 4 (lower is better)
Translates to: MSHGGSVWFDNLPHRWPESFPTP*NRTSTL
Trigger: CAGTGTGGACGTTCTGTTTCAGGGAGTTGGAAAGGA...TTCTGGCCACCTGTGGGGTAGGTTGTCAAACCAAACAGAGCCACCGTGGGACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp AATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCATGGGTCCAGGGAAAAGCGACCGTaGAAGCTGACCCCAGACTCA +
Preference number: 4 (lower is better)
Translates to: NWPKVLLLGSRVVRIHGSREKRP*KLTPDS
Trigger: TGAGTCTGGGGTCAGCTTTCACGGTCGCTTTTCCCT...GGACCCATGAATCCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp GATCTAGATCAATGTGTGAGGATGTGGGTGCAGACACACACCCACACGACAATAACCAGCTTTCTGGCATaGATGGGTCCTCCCGCAGGG +
Preference number: 4 (lower is better)
Translates to: DLDQCVRMWVQTHTHTTITSFLA*MGPPAG
Trigger: CCCTGCGGGAGGACCCATTCATGCCAGAAAGCTGGT...TATTGTCGTGTGGGTGTGTGTCTGCACCCACATCCTCACACATTGATCTAGATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp TTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTCTCCTCCATCTTTCGTGCACAGCCCGCCGTaGCACAGAAGGGCTCTGGTG +
Preference number: 4 (lower is better)
Translates to: FLQFPSTQGNPSSSPPSFVHSPP*HRRALV
Trigger: CACCAGAGCCCTTCTGTGTCACGGCGGGCTGTGCAC...GAAAGATGGAGGAGAAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp TCTGCAATTCACTTCCCTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATTCCAGCTGAAGGGACATaGCCCTCCTCTGCCCTCTTC +
Preference number: 4 (lower is better)
Translates to: SAIHFPLPTLHFLLSSEIPAEGT*PSSALF
Trigger: GAAGAGGGCAGAGGAGGGTCATGTCCCTTCAGCTGG...AATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGGGAAGTGAATTGCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp ACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTCCAGCTGAAGGGACATaGCCCTCCTCTGCCCTCTTC +
Preference number: 4 (lower is better)
Translates to: TFFSPPKLAQSPPSGFKSPAEGT*PSSALF
Trigger: GAAGAGGGCAGAGGAGGGTCATGTCCCTTCAGCTGG...ACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp CCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGGAGGAGACGCTCAGATaGCATGGGTCAAAGGCCTTT +
Preference number: 4 (lower is better)
Translates to: PRCTFFSPPKLAQSPPSGEETLR*HGSKAF
Trigger: AAAGGCCTTTGACCCATGTCATCTGAGCGTCTCCTC...CCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp TCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATCACCTGGGCTATCGCTaGGACTCCACCAATTGGTTG +
Preference number: 4 (lower is better)
Translates to: SPPKLAQSPPSGFKSGQDHLGYR*DSTNWL
Trigger: CAACCAATTGGTGGAGTCTCAGCGATAGCCCAGGTG...ATCCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp GACAGGAGCCCCAACATGAAGTTCTCAGTGCAAAGCTTTGGATTCTGGCTTGGCTCTGGCCAGGTATATTaGTCCTCCAGGCCACCTGAG +
Preference number: 4 (lower is better)
Translates to: DRSPNMKFSVQSFGFWLGSGQVY*SSRPPE
Trigger: CTCAGGTGGCCTGGAGGATCAATATACCTGGCCAGA...GCCAAGCCAGAATCCAAAGCTTTGCACTGAGAACTTCATGTTGGGGCTCCTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310858.10
CDS-3UTR GCA 90 bp GACAGGAGCCCCAACATGAAGTTCTCAGTGCAAAGCTTTGGATTCTGGCTTGGCTCTCCTCATTGGCTGTaGTGGGGAAGGAGACAGCGA +
Preference number: 4 (lower is better)
Translates to: DRSPNMKFSVQSFGFWLGSPHWL*WGRRQR
Trigger: TCGCTGTCTCCTTCCCCAGCACAGCCAATGAGGAGA...GCCAAGCCAGAATCCAAAGCTTTGCACTGAGAACTTCATGTTGGGGCTCCTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310858.10
CDS-3UTR GCA 90 bp GACAGGAGCCCCAACATGAAGTTCTCAGTGCAAAGCTTTGGATTCTGGCTTGGCCCACCTCACGGAGGTTaGTCCGGAAGTTCTCCTCAT +
Preference number: 4 (lower is better)
Translates to: DRSPNMKFSVQSFGFWLGPPHGG*SGSSPH
Trigger: ATGAGGAGAACTTCCGGAGCAACCTCCGTGAGGTGG...GCCAAGCCAGAATCCAAAGCTTTGCACTGAGAACTTCATGTTGGGGCTCCTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310858.10
CDS-3UTR GCA 90 bp GGACAGGAGCCCCAACATGAAGTTCTCAGTGCAAAGCTTTGGATTCTGGCTTGGTTGGACTTGAGCATCTaGGCCACCTCACGGAGGTTG +
Preference number: 4 (lower is better)
Translates to: GQEPQHEVLSAKLWILAWLDLSI*ATSRRL
Trigger: CAACCTCCGTGAGGTGGCGCAGATGCTCAAGTCCAA...CCAAGCCAGAATCCAAAGCTTTGCACTGAGAACTTCATGTTGGGGCTCCTGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310858.10
CDS-3UTR GCA 90 bp CCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGCCATGGCCTTACAGATaGTGCAGATCTTCTCCAGGG +
Preference number: 4 (lower is better)
Translates to: PRCTFFSPPKLAQSPPSGPWPYR*CRSSPG
Trigger: CCCTGGAGAAGATCTGCAGCATCTGTAAGGCCATGG...CCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp CTTCCCTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCCCATGGCCTTACAGATaGTGCAGATCTTCTCCAGGG +
Preference number: 4 (lower is better)
Translates to: LPSPHVALSSLLRNWPKVPWPYR*CRSSPG
Trigger: CCCTGGAGAAGATCTGCAGCATCTGTAAGGCCATGG...GACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGGGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp CCAGAACACCGTGATAGCAGGCTGATCAAACCGCTCACTTCCTCCCTGTTTTCCCCATGGCCTTACAGATaGTGCAGATCTTCTCCAGGG +
Preference number: 4 (lower is better)
Translates to: PEHRDSRLIKPLTSSLFSPWPYR*CRSSPG
Trigger: CCCTGGAGAAGATCTGCAGCATCTGTAAGGCCATGG...GGAAAACAGGGAGGAAGTGAGCGGTTTGATCAGCCTGCTATCACGGTGTTCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp CCTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCCTCCATAGAACCGCTTCATTaGAAACCGGTCCAGAGCCTG +
Preference number: 4 (lower is better)
Translates to: PLPTLHFLLSSEIGPKSSIEPLH*KPVQSL
Trigger: CAGGCTCTGGACCGGTTTGCAATGAAGCGGTTCTAT...GGAGGACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp TCTCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGAAGTTGGGGATGCCGTaGATGATCACGTGGTGCAGA +
Preference number: 4 (lower is better)
Translates to: SLLRNWPKVLLLGSRVVRKLGMP*MITWCR
Trigger: TCTGCACCACGTGATCATGCACGGCATCCCCAACTT...CCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp AGGCTGGCAGCCACTGAAACCTCAGAACAAATTCGCTCCAGCCTCTGCTTTCTGGCACAGGTGTGGAACTaGACACGGAAGATGACGTCT +
Preference number: 4 (lower is better)
Translates to: RLAATETSEQIRSSLCFLAQVWN*TRKMTS
Trigger: AGACGTCATCTTCCGTGTGCAGTTCCACACCTGTGC...CAGAAAGCAGAGGCTGGAGCGAATTTGTTCTGAGGTTTCAGTGGCTGCCAGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453356.1
CDS-3UTR GCA 90 bp CTTCCCTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCGCACAGGTGTGGAACTaGACACGGAAGATGACGTCT +
Preference number: 4 (lower is better)
Translates to: LPSPHVALSSLLRNWPKVAQVWN*TRKMTS
Trigger: AGACGTCATCTTCCGTGTGCAGTTCCACACCTGTGC...GACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGGGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp CCTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCCTCCTCTCCAGGTGCTCCATaGCTTGAATTTTCTCTGGCC +
Preference number: 4 (lower is better)
Translates to: PLPTLHFLLSSEIGPKSSSPGAP*LEFSLA
Trigger: GGCCAGAGAAAATTCAAGGCATGGAGCACCTGGAGA...GGAGGACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp TTGATTTCCCCTTGCAAAGCAGTTGAGTTAGGGAGACAGAGCTTTTCCATTCCCCCATCTAGTGGCCCCTaGGTGTGTCCCACCACCTCC +
Preference number: 4 (lower is better)
Translates to: LISPCKAVELGRQSFSIPPSSGP*VCPTTS
Trigger: GGAGGTGGTGGGACACACGCAGGGGCCACTAGATGG...GGGAATGGAAAAGCTCTGTCTCCCTAACTCAACTGCTTTGCAAGGGGAAATCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp CCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTGGTACATGGCGCCTTaGTTCTCTCGCTCTAAGCCA +
Preference number: 4 (lower is better)
Translates to: PRCTFFSPPKLAQSPPSGWYMAP*FSRSKP
Trigger: TGGCTTAGAGCGAGAGAAGCAAGGCGCCATGTACCA...CCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp TTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTCTCCTCCATCTTTCGGGCGGGACCTGAGGTaGTGGGTGTGGTACATGGCG +
Preference number: 4 (lower is better)
Translates to: FLQFPSTQGNPSSSPPSFGRDLR*WVWYMA
Trigger: CGCCATGTACCACACCCAGCACCTCAGGTCCCGCCC...GAAAGATGGAGGAGAAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp CTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCATAGAGTGTGCCCATGCTaGCCGCACTGTGACCATCCT +
Preference number: 4 (lower is better)
Translates to: LRNWPKVLLLGSRVVRIHRVCPC*PHCDHP
Trigger: AGGATGGTCACAGTGCGGGCAGCATGGGCACACTCT...ATGAATCCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp AATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCATGGGTCCAAGAGAGTGTGCCCATaGTGCCCGCACTGTGACCAT +
Preference number: 4 (lower is better)
Translates to: NWPKVLLLGSRVVRIHGSKRVCP*CPHCDH
Trigger: ATGGTCACAGTGCGGGCAGCATGGGCACACTCTCTT...GGACCCATGAATCCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp GTTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTCTCCTCCATCTTTGGGGATGGGGGTCTCTaGCAATGGCTGAGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: VFAVSIYPGESKFFSSIFGDGGL*QWLRAG
Trigger: CCCAGCCCTCAGCCATTGGCAGAGACCCCCATCCCC...AAAGATGGAGGAGAAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp CCATTCTGGCTTAGAGTCCTTAAATGGTGGTCAGGTGTTTTCCCAACTGTCCAGGACTGTTCAATCTCCTaGTGGGAGGCTGCTCGCGGG +
Preference number: 4 (lower is better)
Translates to: PFWLRVLKWWSGVFPTVQDCSIS*WEAARG
Trigger: CCCGCGAGCAGCCTCCCAGCAGGAGATTGAACAGTC...CTGGACAGTTGGGAAAACACCTGACCACCATTTAAGGACTCTAAGCCAGAATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp TCTCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGAAGGTGAGTAAGACCTaGCAGGAGGGACAGACTCCA +
Preference number: 4 (lower is better)
Translates to: SLLRNWPKVLLLGSRVVRKVSKT*QEGQTP
Trigger: TGGAGTCTGTCCCTCCTGGCAGGTCTTACTCACCTT...CCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp CCAGAACACCGTGATAGCAGGCTGATCAAACCGCTCACTTCCTCCCTGTTTTCCAAGGTGAGTAAGACCTaGCAGGAGGGACAGACTCCA +
Preference number: 4 (lower is better)
Translates to: PEHRDSRLIKPLTSSLFSKVSKT*QEGQTP
Trigger: TGGAGTCTGTCCCTCCTGGCAGGTCTTACTCACCTT...GGAAAACAGGGAGGAAGTGAGCGGTTTGATCAGCCTGCTATCACGGTGTTCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp CCCAGCTTGATTTCCCCTTGCAAAGCAGTTGAGTTAGGGAGACAGAGCTTTTCCGTAACTCCTGTGGGGTaGAACAGGATGTCCGCTGGG +
Preference number: 4 (lower is better)
Translates to: PSLISPCKAVELGRQSFSVTPVG*NRMSAG
Trigger: CCCAGCGGACATCCTGTTGCACCCCACAGGAGTTAC...GGAAAAGCTCTGTCTCCCTAACTCAACTGCTTTGCAAGGGGAAATCAAGCTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000611415.4
CDS-3UTR GCA 90 bp TTGGAGGCTTTGGGTTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTGGGGACCCTGGTCACTaGTCTCTCCCGACGGGAAAC +
Preference number: 4 (lower is better)
Translates to: LEALGFCSFHLPRGIQVLGDPGH*SLPTGN
Trigger: GTTTCCCGTCGGGAGAGAGCAGTGACCAGGGTCCCC...AAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAACCCAAAGCCTCCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp TCTGCAATTCACTTCCCTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCTGCTGTAGCTACTaGCCACAGTCGGGAGAGGAG +
Preference number: 4 (lower is better)
Translates to: SAIHFPLPTLHFLLSSEIGCCSY*PQSGEE
Trigger: CTCCTCTCCCGACTGTGGGCAGTAGCTACAGCAGCC...AATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGGGAAGTGAATTGCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp CTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCATGTGAGTAGTCGGGGCTaGTGTAGCTACTGCCCACAG +
Preference number: 4 (lower is better)
Translates to: LRNWPKVLLLGSRVVRIHVSSRG*CSYCPQ
Trigger: CTGTGGGCAGTAGCTACAGCAGCCCCGACTACTCAC...ATGAATCCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp GATCTAGATCAATGTGTGAGGATGTGGGTGCAGACACACACCCACACGACAATAGGGGGCTGGAGACAGTaGTACCATGGAAGCCAGTGC +
Preference number: 4 (lower is better)
Translates to: DLDQCVRMWVQTHTHTTIGGWRQ*YHGSQC
Trigger: GCACTGGCTTCCATGGTAGCACTGTCTCCAGCCCCC...TATTGTCGTGTGGGTGTGTGTCTGCACCCACATCCTCACACATTGATCTAGATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp TTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTCTCCTCCATCTTTCGGGTGGTCGCTGCACTaGTCTGGGGGCTGGAGACAG +
Preference number: 4 (lower is better)
Translates to: FLQFPSTQGNPSSSPPSFGWSLH*SGGWRQ
Trigger: CTGTCTCCAGCCCCCAGAGCAGTGCAGCGACCACCC...GAAAGATGGAGGAGAAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp TTGATTTCCCCTTGCAAAGCAGTTGAGTTAGGGAGACAGAGCTTTTCCATTCCCGGTCCAAGCAGGGGCTaGCGGGAACCACAGATCCAG +
Preference number: 4 (lower is better)
Translates to: LISPCKAVELGRQSFSIPGPSRG*REPQIQ
Trigger: CTGGATCTGTGGTTCCCGGCAGCCCCTGCTTGGACC...GGGAATGGAAAAGCTCTGTCTCCCTAACTCAACTGCTTTGCAAGGGGAAATCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp TTGATTTCCCCTTGCAAAGCAGTTGAGTTAGGGAGACAGAGCTTTTCCATTCCCCCAGAGGCACTGCTCTaGCGGGACAGTGTGGGTCTC +
Preference number: 4 (lower is better)
Translates to: LISPCKAVELGRQSFSIPPEALL*RDSVGL
Trigger: GAGACCCACACTGTCCCGGCAGAGCAGTGCCTCTGG...GGGAATGGAAAAGCTCTGTCTCCCTAACTCAACTGCTTTGCAAGGGGAAATCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp TCTAGATCAATGTGTGAGGATGTGGGTGCAGACACACACCCACACGACAATATAGGTAGCCAGAGGCACTaGTCTGCCGGGACAGTGTGG +
Preference number: 4 (lower is better)
Translates to: SRSMCEDVGADTHPHDNIGSQRH*SAGTVW
Trigger: CCACACTGTCCCGGCAGAGCAGTGCCTCTGGCTACC...TATATTGTCGTGTGGGTGTGTGTCTGCACCCACATCCTCACACATTGATCTAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp TTGATTTCCCCTTGCAAAGCAGTTGAGTTAGGGAGACAGAGCTTTTCCATTCCCCATAGTTGGGGAGGCTaGCTGCCCGGTCTCCCACTG +
Preference number: 4 (lower is better)
Translates to: LISPCKAVELGRQSFSIPHSWGG*LPGLPL
Trigger: CAGTGGGAGACCGGGCAGGCAGCCTCCCCAACTATG...GGGAATGGAAAAGCTCTGTCTCCCTAACTCAACTGCTTTGCAAGGGGAAATCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp TTGGAGGCTTTGGGTTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTCATAGTTGGGGAGGCTaGCTGCCCGGTCTCCCACTG +
Preference number: 4 (lower is better)
Translates to: LEALGFCSFHLPRGIQVLHSWGG*LPGLPL
Trigger: CAGTGGGAGACCGGGCAGGCAGCCTCCCCAACTATG...AAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAACCCAAAGCCTCCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp GAAATCTTTGGCAAGAATATACTGCAGTGCGGAGTGTTGTGTGTGCGTAGGTGTCACTGGGACTGGACATaGCGCTGGCGACAGGCGAAG +
Preference number: 4 (lower is better)
Translates to: EIFGKNILQCGVLCVRRCHWDWT*RWRQAK
Trigger: CTTCGCCTGTCGCCAGCGGCATGTCCAGTCCCAGTG...ACACCTACGCACACACAACACTCCGCACTGCAGTATATTCTTGCCAAAGATTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp TTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTCTCCTCCATCTTTCGGGAGAAGGAGACGGTaGTGCCCCCACTGGGACTGG +
Preference number: 4 (lower is better)
Translates to: FLQFPSTQGNPSSSPPSFGRRRR*CPHWDW
Trigger: CCAGTCCCAGTGGGGGCAGCACCGTCTCCTTCTCCC...GAAAGATGGAGGAGAAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp CCCAGCTTGATTTCCCCTTGCAAAGCAGTTGAGTTAGGGAGACAGAGCTTTTCCAGCTGGCGTGGGGTCTaGAGCCAACGTCTCAGATGT +
Preference number: 4 (lower is better)
Translates to: PSLISPCKAVELGRQSFSSWRGV*SQRLRC
Trigger: ACATCTGAGACGTTGGCTGCAGACCCCACGCCAGCT...GGAAAAGCTCTGTCTCCCTAACTCAACTGCTTTGCAAGGGGAAATCAAGCTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp TTGGGTTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTCTCCTCCATGGCAGGACAGGGCGATaGCATTGCAGACCCTCCCAC +
Preference number: 4 (lower is better)
Translates to: LGFCSFHLPRGIQVLLLHGRTGR*HCRPSH
Trigger: GTGGGAGGGTCTGCAATGGCATCGCCCTGTCCTGCC...ATGGAGGAGAAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAACCCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp TTGATTTCCCCTTGCAAAGCAGTTGAGTTAGGGAGACAGAGCTTTTCCATTCCCCCTTCTGCCCTCTGCTaGATGGGCAGCGTGGCTCAG +
Preference number: 4 (lower is better)
Translates to: LISPCKAVELGRQSFSIPPSALC*MGSVAQ
Trigger: CTGAGCCACGCTGCCCATGCAGCAGAGGGCAGAAGG...GGGAATGGAAAAGCTCTGTCTCCCTAACTCAACTGCTTTGCAAGGGGAAATCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp TTGGGTTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTCTCCTCCATCCTTCTGCCCTCTGCTaGATGGGCAGCGTGGCTCAG +
Preference number: 4 (lower is better)
Translates to: LGFCSFHLPRGIQVLLLHPSALC*MGSVAQ
Trigger: CTGAGCCACGCTGCCCATGCAGCAGAGGGCAGAAGG...ATGGAGGAGAAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAACCCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp TCTGCAATTCACTTCCCTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATTAAGCCTTCTGCCCTCTaGTGCATGGGCAGCGTGGCT +
Preference number: 4 (lower is better)
Translates to: SAIHFPLPTLHFLLSSEIKPSAL*CMGSVA
Trigger: AGCCACGCTGCCCATGCAGCAGAGGGCAGAAGGCTT...AATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGGGAAGTGAATTGCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp GCAGACCCTCCCACTCCTGCTGGGGTCTTTGTAGAAGAGAAGGGTCTGGCGGCATATATATCAGTACAATaGCTCTCTCTAGGGGACTCG +
Preference number: 4 (lower is better)
Translates to: ADPPTPAGVFVEEKGLAAYISVQ*LSLGDS
Trigger: CGAGTCCCCTAGAGAGAGGCATTGTACTGATATATA...TGCCGCCAGACCCTTCTCTTCTACAAAGACCCCAGCAGGAGTGGGAGGGTCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp TCTGCAATTCACTTCCCTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATTTGGGGTCTGCGTCGCTaGGATGTCCATGACTCCCTG +
Preference number: 4 (lower is better)
Translates to: SAIHFPLPTLHFLLSSEIWGLRR*DVHDSL
Trigger: CAGGGAGTCATGGACATCGCAGCGACGCAGACCCCA...AATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGGGAAGTGAATTGCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp AATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCATGGGTCCCCCGACTCCCCTCACTaGTGGGCGACATTGAATTTG +
Preference number: 4 (lower is better)
Translates to: NWPKVLLLGSRVVRIHGSPDSPH*WATLNL
Trigger: CAAATTCAATGTCGCCCAGCAGTGAGGGGAGTCGGG...GGACCCATGAATCCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp GGACAGGAGCCCCAACATGAAGTTCTCAGTGCAAAGCTTTGGATTCTGGCTTGGTGTTCCCATCCTCCATaGCGTCATCTCGATGCCCAC +
Preference number: 4 (lower is better)
Translates to: GQEPQHEVLSAKLWILAWCSHPP*RHLDAH
Trigger: GTGGGCATCGAGATGACGGCATGGAGGATGGGAACA...CCAAGCCAGAATCCAAAGCTTTGCACTGAGAACTTCATGTTGGGGCTCCTGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310858.10
CDS-3UTR GCA 90 bp TTGGGTTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTCTCCTCCATGGCTCTCCTGTGGGGTaGAACAGGATGTCCGCTGGG +
Preference number: 4 (lower is better)
Translates to: LGFCSFHLPRGIQVLLLHGSPVG*NRMSAG
Trigger: CCCAGCGGACATCCTGTTGCACCCCACAGGAGAGCC...ATGGAGGAGAAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAACCCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000430930.5
ENST00000446688.5
ENST00000646520.1
CDS-3UTR GCA 90 bp CTTCCCTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCGATGACAGGAGAAGCTaGAGACTTTGCAGGTGCAGC +
Preference number: 4 (lower is better)
Translates to: LPSPHVALSSLLRNWPKVDDRRS*RLCRCS
Trigger: GCTGCACCTGCAAAGTCTGCAGCTTCTCCTGTCATC...GACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGGGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp TCCCCAGCACAACGACCAATTAGGCTGGCAGCCACTGAAACCTCAGAACAAATTCCGGGGATGGAGGAGTaGTTTTCACAAGCAGCCTGG +
Preference number: 4 (lower is better)
Translates to: SPAQRPIRLAATETSEQIPGMEE*FSQAAW
Trigger: CCAGGCTGCTTGTGAAAAGCACTCCTCCATCCCCGG...AATTTGTTCTGAGGTTTCAGTGGCTGCCAGCCTAATTGGTCGTTGTGCTGGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000453356.1
CDS-3UTR CCA 90 bp CTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCATCGGAGGCAGCAGCTGTaGCTGGCAAGAAGCTGGTTT +
Preference number: 4 (lower is better)
Translates to: LRNWPKVLLLGSRVVRIHRRQQL*LARSWF
Trigger: AAACCAGCTTCTTGCCAGCCACAGCTGCTGCCTCCG...ATGAATCCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000171887.8
ENST00000611415.4
CDS-3UTR CCA 90 bp ACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGCACCAGCTCATGGTTaGATGGAGGAACGCAGGGGG +
Preference number: 4 (lower is better)
Translates to: TFFSPPKLAQSPPSGFKSAPAHG*MEERRG
Trigger: CCCCCTGCGTTCCTCCATCCAACCATGAGCTGGTGC...ACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp GTAGAAGAGAAGGGTCTGGCGGCACCCAGGGTCACTAGAGTGCAGGTGCAGGCAGTCCACTACATTCTTTaGTGCATTCTCAGTGGTGAT +
Preference number: 4 (lower is better)
Translates to: VEEKGLAAPRVTRVQVQAVHYIL*CILSGD
Trigger: ATCACCACTGAGAATGCACCAAAGAATGTAGTGGAC...TGCCTGCACCTGCACTCTAGTGACCCTGGGTGCCGCCAGACCCTTCTCTTCTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATCACAGCTGTCCTCCATaGTCCGGCTCACACTCATGT +
Preference number: 4 (lower is better)
Translates to: SPPKLAQSPPSGFKSGQDHSCPP*SGSHSC
Trigger: ACATGAGTGTGAGCCGGACCATGGAGGACAGCTGTG...ATCCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TCTCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGGGAAGTTCTCCTCATTaGCTGTGCTGGGGAAGGAGA +
Preference number: 4 (lower is better)
Translates to: SLLRNWPKVLLLGSRVVRGSSPH*LCWGRR
Trigger: TCTCCTTCCCCAGCACAGCCAATGAGGAGAACTTCC...CCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp GAAATCTTTGGCAAGAATATACTGCAGTGCGGAGTGTTGTGTGTGCGTAGGTGTTCCAGGGCTGGGGTGTaGAGGTCGGGCCAGCCAAAT +
Preference number: 4 (lower is better)
Translates to: EIFGKNILQCGVLCVRRCSRAGV*RSGQPN
Trigger: ATTTGGCTGGCCCGACCTCCACACCCCAGCCCTGGA...ACACCTACGCACACACAACACTCCGCACTGCAGTATATTCTTGCCAAAGATTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TCTAGATCAATGTGTGAGGATGTGGGTGCAGACACACACCCACACGACAATATATCCAGGGCTGGGGTGTaGAGGTCGGGCCAGCCAAAT +
Preference number: 4 (lower is better)
Translates to: SRSMCEDVGADTHPHDNISRAGV*RSGQPN
Trigger: ATTTGGCTGGCCCGACCTCCACACCCCAGCCCTGGA...TATATTGTCGTGTGGGTGTGTGTCTGCACCCACATCCTCACACATTGATCTAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp CCCAGCTTGATTTCCCCTTGCAAAGCAGTTGAGTTAGGGAGACAGAGCTTTTCCAACCGGTCCAGAGCCTaGTCCGCACTGGCAGAAATG +
Preference number: 4 (lower is better)
Translates to: PSLISPCKAVELGRQSFSNRSRA*SALAEM
Trigger: CATTTCTGCCAGTGCGGACCAGGCTCTGGACCGGTT...GGAAAAGCTCTGTCTCCCTAACTCAACTGCTTTGCAAGGGGAAATCAAGCTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp CACAGGGCAGAGTCCAGGAGCCAGAACACTTCCTTGGCTTGGAAAAGGAAAAAGTGCACGTACCTTCTTTaGGATGGCTGGCCAATGGGC +
Preference number: 4 (lower is better)
Translates to: HRAESRSQNTSLAWKRKKCTYLL*DGWPMG
Trigger: GCCCATTGGCCAGCCATCCCAAAGAAGGTACGTGCA...CTTTTTCCTTTTCCAAGCCAAGGAAGTGTTCTGGCTCCTGGACTCTGCCCTGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310858.10
CDS-3UTR CCA 90 bp CGATGCCATTGCAGACCCTCCCACTCCTGCTGGGGTCTTTGTAGAAGAGAAGGGGTAGATGCGGAGAAATaGCCGACATCCTCCTTTAGA +
Preference number: 4 (lower is better)
Translates to: RCHCRPSHSCWGLCRREGVDAEK*PTSSFR
Trigger: TCTAAAGGAGGATGTCGGCCATTTCTCCGCATCTAC...CCCTTCTCTTCTACAAAGACCCCAGCAGGAGTGGGAGGGTCTGCAATGGCATCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATGATGACGTCTCGGGCTaGGCTTCGGAACTTCTTGTG +
Preference number: 4 (lower is better)
Translates to: SPPKLAQSPPSGFKSGQDDDVSG*ASELLV
Trigger: CACAAGAAGTTCCGAAGCCCAGCCCGAGACGTCATC...ATCCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp GACAGGAGCCCCAACATGAAGTTCTCAGTGCAAAGCTTTGGATTCTGGCTTGGCGATGACGTCTCGGGCTaGGCTTCGGAACTTCTTGTG +
Preference number: 4 (lower is better)
Translates to: DRSPNMKFSVQSFGFWLGDDVSG*ASELLV
Trigger: CACAAGAAGTTCCGAAGCCCAGCCCGAGACGTCATC...GCCAAGCCAGAATCCAAAGCTTTGCACTGAGAACTTCATGTTGGGGCTCCTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310858.10
CDS-3UTR CCA 90 bp ACCCTCCTTTCCAACTCCCTGAAACAGAACGTCCACACTGACACAGCTCCTTGGTGGATGGCACAGGTGTaGAACTGCACACGGAAGATG +
Preference number: 4 (lower is better)
Translates to: TLLSNSLKQNVHTDTAPWWMAQV*NCTRKM
Trigger: CATCTTCCGTGTGCAGTTCCACACCTGTGCCATCCA...CCAAGGAGCTGTGTCAGTGTGGACGTTCTGTTTCAGGGAGTTGGAAAGGAGGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp CCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTGGATGGCACAGGTGTaGAACTGCACACGGAAGATG +
Preference number: 4 (lower is better)
Translates to: PRCTFFSPPKLAQSPPSGWMAQV*NCTRKM
Trigger: CATCTTCCGTGTGCAGTTCCACACCTGTGCCATCCA...CCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp CTTCCCTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCTGGATGGCACAGGTGTaGAACTGCACACGGAAGATG +
Preference number: 4 (lower is better)
Translates to: LPSPHVALSSLLRNWPKVWMAQV*NCTRKM
Trigger: CATCTTCCGTGTGCAGTTCCACACCTGTGCCATCCA...GACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGGGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TTCCTTCGCAGGTCCCCTCTCCATTGTTTTCTCGCCCAATCCTTCCCTCTTGCTTGGATGGCACAGGTGTaGAACTGCACACGGAAGATG +
Preference number: 4 (lower is better)
Translates to: FLRRSPLHCFLAQSFPLAWMAQV*NCTRKM
Trigger: CATCTTCCGTGTGCAGTTCCACACCTGTGCCATCCA...AGCAAGAGGGAAGGATTGGGCGAGAAAACAATGGAGAGGGGACCTGCGAAGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp CTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCATCCCCCAGGTCATGGATaGCACAGGTGTGGAACTGCA +
Preference number: 4 (lower is better)
Translates to: LRNWPKVLLLGSRVVRIHPPGHG*HRCGTA
Trigger: TGCAGTTCCACACCTGTGCCATCCATGACCTGGGGG...ATGAATCCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp GGACAGGAGCCCCAACATGAAGTTCTCAGTGCAAAGCTTTGGATTCTGGCTTGGACAACCCCCAGGTCATaGATGGCACAGGTGTGGAAC +
Preference number: 4 (lower is better)
Translates to: GQEPQHEVLSAKLWILAWTTPRS*MAQVWN
Trigger: GTTCCACACCTGTGCCATCCATGACCTGGGGGTTGT...CCAAGCCAGAATCCAAAGCTTTGCACTGAGAACTTCATGTTGGGGCTCCTGTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310858.10
CDS-3UTR CCA 90 bp GCAATTCACTTCCCTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCACAACCCCCAGGTCATaGATGGCACAGGTGTGGAAC +
Preference number: 4 (lower is better)
Translates to: AIHFPLPTLHFLLSSEIGTTPRS*MAQVWN
Trigger: GTTCCACACCTGTGCCATCCATGACCTGGGGGTTGT...GCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGGGAAGTGAATTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp CAAACATCCCCAGCACAACGACCAATTAGGCTGGCAGCCACTGAAACCTCAGAAACAACCCCCAGGTCATaGATGGCACAGGTGTGGAAC +
Preference number: 4 (lower is better)
Translates to: QTSPAQRPIRLAATETSETTPRS*MAQVWN
Trigger: GTTCCACACCTGTGCCATCCATGACCTGGGGGTTGT...TTCTGAGGTTTCAGTGGCTGCCAGCCTAATTGGTCGTTGTGCTGGGGATGTTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000453356.1
CDS-3UTR CCA 90 bp CCATTCTGGCTTAGAGTCCTTAAATGGTGGTCAGGTGTTTTCCCAACTGTCCAGAGCGTGTGTTCCACGTaGTTGGGGGTGGCCGACAGT +
Preference number: 4 (lower is better)
Translates to: PFWLRVLKWWSGVFPTVQSVCST*LGVADS
Trigger: ACTGTCGGCCACCCCCAACCACGTGGAACACACGCT...CTGGACAGTTGGGAAAACACCTGACCACCATTTAAGGACTCTAAGCCAGAATGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTCTCCTCCATCTTTCGACTCAAGGCAGCAGTaGCACTGGAGGCCCCGGGGA +
Preference number: 4 (lower is better)
Translates to: FLQFPSTQGNPSSSPPSFDSRQQ*HWRPRG
Trigger: TCCCCGGGGCCTCCAGTGCCACTGCTGCCTTGAGTC...GAAAGATGGAGGAGAAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp CCCAGCTTGATTTCCCCTTGCAAAGCAGTTGAGTTAGGGAGACAGAGCTTTTCCCTGAGGTGCTGGGTGTaGTACATGGCGCCTTGCTTC +
Preference number: 4 (lower is better)
Translates to: PSLISPCKAVELGRQSFSLRCWV*YMAPCF
Trigger: GAAGCAAGGCGCCATGTACCACACCCAGCACCTCAG...GGAAAAGCTCTGTCTCCCTAACTCAACTGCTTTGCAAGGGGAAATCAAGCTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TTGGAGGCTTTGGGTTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTCGGGACCTGAGGTGCTaGGTGTGGTACATGGCGCCT +
Preference number: 4 (lower is better)
Translates to: LEALGFCSFHLPRGIQVLRDLRC*VWYMAP
Trigger: AGGCGCCATGTACCACACCCAGCACCTCAGGTCCCG...AAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAACCCAAAGCCTCCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TTGGGTTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTCTCCTCCATCGGGACCTGAGGTGCTaGGTGTGGTACATGGCGCCT +
Preference number: 4 (lower is better)
Translates to: LGFCSFHLPRGIQVLLLHRDLRC*VWYMAP
Trigger: AGGCGCCATGTACCACACCCAGCACCTCAGGTCCCG...ATGGAGGAGAAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAACCCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TTGATTTCCCCTTGCAAAGCAGTTGAGTTAGGGAGACAGAGCTTTTCCATTCCCTGGGCTGGGACAACGTaGCGTCCAGAGGAGGGCACA +
Preference number: 4 (lower is better)
Translates to: LISPCKAVELGRQSFSIPWAGTT*RPEEGT
Trigger: TGTGCCCTCCTCTGGACGCCACGTTGTCCCAGCCCA...GGGAATGGAAAAGCTCTGTCTCCCTAACTCAACTGCTTTGCAAGGGGAAATCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp ACAGGGCGATGCCATTGCAGACCCTCCCACTCCTGCTGGGGTCTTTGTAGAAGAGTGACCATCCTGGTTTaGCAATTCATCGTCCAGGAT +
Preference number: 4 (lower is better)
Translates to: TGRCHCRPSHSCWGLCRRVTILV*QFIVQD
Trigger: ATCCTGGACGATGAATTGCCAAACCAGGATGGTCAC...TCTTCTACAAAGACCCCAGCAGGAGTGGGAGGGTCTGCAATGGCATCGCCCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp CCCAGCTTGATTTCCCCTTGCAAAGCAGTTGAGTTAGGGAGACAGAGCTTTTCCAGCGGAACATACCGCTaGGGTCATGGGCATAGTGGG +
Preference number: 4 (lower is better)
Translates to: PSLISPCKAVELGRQSFSSGTYR*GHGHSG
Trigger: CCCACTATGCCCATGACCCCAGCGGTATGTTCCGCT...GGAAAAGCTCTGTCTCCCTAACTCAACTGCTTTGCAAGGGGAAATCAAGCTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TTGATTTCCCCTTGCAAAGCAGTTGAGTTAGGGAGACAGAGCTTTTCCATTCCCTCTTTCCTGCTGGCGTaGAGGTGGGCGAGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: LISPCKAVELGRQSFSIPSFLLA*RWARLL
Trigger: CAGCAGCCTCGCCCACCTCCACGCCAGCAGGAAAGA...GGGAATGGAAAAGCTCTGTCTCCCTAACTCAACTGCTTTGCAAGGGGAAATCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp ACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGAACTCAGGGAGACTaGGGATGGGGGTCTCTGCCA +
Preference number: 4 (lower is better)
Translates to: TFFSPPKLAQSPPSGFKSGTQGD*GWGSLP
Trigger: TGGCAGAGACCCCCATCCCCAGTCTCCCTGAGTTCC...ACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp ATGTCCAGGATAAGGAGCATACACCAGGATTTATACACGGTGGCAGCGGCTATAGGAACTCAGGGAGACTaGGGATGGGGGTCTCTGCCA +
Preference number: 4 (lower is better)
Translates to: MSRIRSIHQDLYTVAAAIGTQGD*GWGSLP
Trigger: TGGCAGAGACCCCCATCCCCAGTCTCCCTGAGTTCC...TATAGCCGCTGCCACCGTGTATAAATCCTGGTGTATGCTCCTTATCCTGGACAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp CTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCATTGTTCAATCTCCTGCTaGGAGGCTGCTCGCGGGAAC +
Preference number: 4 (lower is better)
Translates to: LRNWPKVLLLGSRVVRIHCSISC*EAARGN
Trigger: GTTCCCGCGAGCAGCCTCCCAGCAGGAGATTGAACA...ATGAATCCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp GTTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTCTCCTCCATCTTTGGCAGCAGCGGAGGCTaGCTCCAGGTCCAGCATCAG +
Preference number: 4 (lower is better)
Translates to: VFAVSIYPGESKFFSSIFGSSGG*LQVQHQ
Trigger: CTGATGCTGGACCTGGAGCCAGCCTCCGCTGCTGCC...AAAGATGGAGGAGAAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp AGGTGCCTTGGGTCTGAGATACTTTCAAGCAAACAAGTTCTTCCACTTGATGTCGGCCCTGGAGGGCTGTaGGTGGTCGGAAGGAAGGCA +
Preference number: 4 (lower is better)
Translates to: RCLGSEILSSKQVLPLDVGPGGL*VVGRKA
Trigger: TGCCTTCCTTCCGACCACCCACAGCCCTCCAGGGCC...GACATCAAGTGGAAGAACTTGTTTGCTTGAAAGTATCTCAGACCCAAGGCACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp CCTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCCTCCAGGGGATGTGGCTTCTaGAGACTGGTTCTCATACTG +
Preference number: 4 (lower is better)
Translates to: PLPTLHFLLSSEIGPKSSRGCGF*RLVLIL
Trigger: CAGTATGAGAACCAGTCTCCAGAAGCCACATCCCCT...GGAGGACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp GCAATTCACTTCCCTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCGGCTACGAGGGGATGTaGCTTCTGGAGACTGGTTCT +
Preference number: 4 (lower is better)
Translates to: AIHFPLPTLHFLLSSEIGGYEGM*LLETGS
Trigger: AGAACCAGTCTCCAGAAGCCACATCCCCTCGTAGCC...GCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGGGAAGTGAATTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TTGGAGGCTTTGGGTTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTCTCCCAGGCACCGTGTaGACGCCAGCCACACTGAAC +
Preference number: 4 (lower is better)
Translates to: LEALGFCSFHLPRGIQVLLPGTV*TPATLN
Trigger: GTTCAGTGTGGCTGGCGTCCACACGGTGCCTGGGAG...AAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAACCCAAAGCCTCCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TCTGCAATTCACTTCCCTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGTGATGGCTCAAACTaGGACTGCTGGGGGCAGCCA +
Preference number: 4 (lower is better)
Translates to: SAIHFPLPTLHFLLSSEIGDGSN*DCWGQP
Trigger: TGGCTGCCCCCAGCAGTCCCAGTTTGAGCCATCACC...AATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGGGAAGTGAATTGCAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp GCAATTCACTTCCCTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCGAGACAGTGCTACCATaGAAGCCAGTGCCTGGTGGA +
Preference number: 4 (lower is better)
Translates to: AIHFPLPTLHFLLSSEIGETVLP*KPVPGG
Trigger: TCCACCAGGCACTGGCTTCCATGGTAGCACTGTCTC...GCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGGGAAGTGAATTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TCTAGATCAATGTGTGAGGATGTGGGTGCAGACACACACCCACACGACAATATAGACTCCCCGGGGTGGTaGCCACTTTGTTGTGGAGGC +
Preference number: 4 (lower is better)
Translates to: SRSMCEDVGADTHPHDNIDSPGW*PLCCGG
Trigger: GCCTCCACAACAAAGTGGCCACCACCCCGGGGAGTC...TATATTGTCGTGTGGGTGTGTGTCTGCACCCACATCCTCACACATTGATCTAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TTGGGTTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTCTCCTCCATGACTCCCCGGGGTGGTaGCCACTTTGTTGTGGAGGC +
Preference number: 4 (lower is better)
Translates to: LGFCSFHLPRGIQVLLLHDSPGW*PLCCGG
Trigger: GCCTCCACAACAAAGTGGCCACCACCCCGGGGAGTC...ATGGAGGAGAAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAACCCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp ACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTTGGGACTCCCCGGGGTaGTGGCCACTTTGTTGTGGA +
Preference number: 4 (lower is better)
Translates to: TFFSPPKLAQSPPSGFKSWDSPG*WPLCCG
Trigger: TCCACAACAAAGTGGCCACCACCCCGGGGAGTCCCA...ACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATCATCCTTCGCTTCTCTaGCAAGGCTGGTGTTGGGCT +
Preference number: 4 (lower is better)
Translates to: SPPKLAQSPPSGFKSGQDHPSLL*QGWCWA
Trigger: AGCCCAACACCAGCCTTGCCAGAGAAGCGAAGGATG...ATCCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp CCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGCTGGCATGGAGTACTTaGAGAAGTCGGGCAGAGTGT +
Preference number: 4 (lower is better)
Translates to: PRCTFFSPPKLAQSPPSGLAWST*RSRAEC
Trigger: ACACTCTGCCCGACTTCTCCAAGTACTCCATGCCAG...CCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TCTCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGCTCCGGGCTGTTGTCTaGCATGGAGTACTTGGAGAA +
Preference number: 4 (lower is better)
Translates to: SLLRNWPKVLLLGSRVVRLRAVV*HGVLGE
Trigger: TTCTCCAAGTACTCCATGCCAGACAACAGCCCGGAG...CCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp CCCAGCTTGATTTCCCCTTGCAAAGCAGTTGAGTTAGGGAGACAGAGCTTTTCCCGATGGCCTGCTCCCTaGAGATCTCAGGCTTGTACC +
Preference number: 4 (lower is better)
Translates to: PSLISPCKAVELGRQSFSRWPAP*RSQACT
Trigger: GGTACAAGCCTGAGATCTCCAGGGAGCAGGCCATCG...GGAAAAGCTCTGTCTCCCTAACTCAACTGCTTTGCAAGGGGAAATCAAGCTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp CTTCCCTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCCATGATGGTTGGAGGTaGCGAAGACACCTTCATGGC +
Preference number: 4 (lower is better)
Translates to: LPSPHVALSSLLRNWPKVHDGWR*RRHLHG
Trigger: GCCATGAAGGTGTCTTCGCCACCTCCAACCATCATG...GACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGGGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATCAGCGATCCGAAGTTTaGCTCATTGGGGCAGCCCTT +
Preference number: 4 (lower is better)
Translates to: SPPKLAQSPPSGFKSGQDQRSEV*LIGAAL
Trigger: AAGGGCTGCCCCAATGAGCCAAACTTCGGATCGCTG...ATCCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp GCAATTCACTTCCCTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCGCAAGGCAGGGCCAATaGGATGATGGAGTGCTGGTA +
Preference number: 4 (lower is better)
Translates to: AIHFPLPTLHFLLSSEIGARQGQ*DDGVLV
Trigger: TACCAGCACTCCATCATCCCATTGGCCCTGCCTTGC...GCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGGGAAGTGAATTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATGGTCTGCAGTTGAGTTaGCAGGGCCGGAGCTATCTT +
Preference number: 4 (lower is better)
Translates to: SPPKLAQSPPSGFKSGQDGLQLS*QGRSYL
Trigger: AAGATAGCTCCGGCCCTGCCAACTCAACTGCAGACC...ATCCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TCTGCAATTCACTTCCCTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATTAACGATGGTGGCAGCTaGCGTGGGGTCTGCAGCCAA +
Preference number: 4 (lower is better)
Translates to: SAIHFPLPTLHFLLSSEINDGGS*RGVCSQ
Trigger: TTGGCTGCAGACCCCACGCCAGCTGCCACCATCGTT...AATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGGGAAGTGAATTGCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp CCCAGCTTGATTTCCCCTTGCAAAGCAGTTGAGTTAGGGAGACAGAGCTTTTCCAGCTCAGCAAAGAGGTaGCAGGCGTTGTCCGTGGTG +
Preference number: 4 (lower is better)
Translates to: PSLISPCKAVELGRQSFSSSAKR*QALSVV
Trigger: CACCACGGACAACGCCTGCCACCTCTTTGCTGAGCT...GGAAAAGCTCTGTCTCCCTAACTCAACTGCTTTGCAAGGGGAAATCAAGCTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp CTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCATCAGAGGCCGGCTGGTTaGGGTCAAGCTCAGCAAAGA +
Preference number: 4 (lower is better)
Translates to: LRNWPKVLLLGSRVVRIHQRPAG*GQAQQR
Trigger: TCTTTGCTGAGCTTGACCCCAACCAGCCGGCCTCTG...ATGAATCCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp CCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGCACGGTGGCTCTGTTTaGTTTGACAACCTACCCCAC +
Preference number: 4 (lower is better)
Translates to: PRCTFFSPPKLAQSPPSGHGGSV*FDNLPH
Trigger: GTGGGGTAGGTTGTCAAACCAAACAGAGCCACCGTG...CCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TTCCTTCGCAGGTCCCCTCTCCATTGTTTTCTCGCCCAATCCTTCCCTCTTGCTCTGTCACCCATAGCTTaGTTGTTTGTCCCTCCCCTG +
Preference number: 4 (lower is better)
Translates to: FLRRSPLHCFLAQSFPLALSPIA*LFVPPL
Trigger: CAGGGGAGGGACAAACAACCAAGCTATGGGTGACAG...AGCAAGAGGGAAGGATTGGGCGAGAAAACAATGGAGAGGGGACCTGCGAAGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp CCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGCCCTCCCACTCCTGCTaGGGTCTTTGTAGAAGAGAA +
Preference number: 4 (lower is better)
Translates to: PRCTFFSPPKLAQSPPSGPSHSC*GLCRRE
Trigger: TTCTCTTCTACAAAGACCCCAGCAGGAGTGGGAGGG...CCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp GGGGAAGACACCCCGAGCTCAACAGCTGCCTGTTCTGACAGATCTCTTCCTATGGAAGGAAGAGCACTTTaGAGGGACTTTGGTCACCAG +
Preference number: 4 (lower is better)
Translates to: GEDTPSSTAACSDRSLPMEGRAL*RDFGHQ
Trigger: CTGGTGACCAAAGTCCCTCCAAAGTGCTCTTCCTTC...CATAGGAAGAGATCTGTCAGAACAGGCAGCTGTTGAGCTCGGGGTGTCTTCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TCTGCCCTCTGCTGCATGGGCAGCGTGGCTCAGCTAGGGAAACCAAGGCAGAAATCCTGGGCTCTCCAGTaGGAGATGAGATATTTACAA +
Preference number: 4 (lower is better)
Translates to: SALCCMGSVAQLGKPRQKSWALQ*EMRYLQ
Trigger: TTGTAAATATCTCATCTCCCACTGGAGAGCCCAGGA...TTTCTGCCTTGGTTTCCCTAGCTGAGCCACGCTGCCCATGCAGCAGAGGGCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TCTGCAATTCACTTCCCTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATTGCTTTCTGGCATGAATaGGTCCTCCCGCAGGGGCAC +
Preference number: 4 (lower is better)
Translates to: SAIHFPLPTLHFLLSSEIAFWHE*VLPQGH
Trigger: GTGCCCCTGCGGGAGGACCCATTCATGCCAGAAAGC...AATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGGGAAGTGAATTGCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TTCCTTCGCAGGTCCCCTCTCCATTGTTTTCTCGCCCAATCCTTCCCTCTTGCTCAGACAGCGCTCTCCTaGCTGACACACAGATTCAAC +
Preference number: 4 (lower is better)
Translates to: FLRRSPLHCFLAQSFPLAQTALS*LTHRFN
Trigger: GTTGAATCTGTGTGTCAGCCAGGAGAGCGCTGTCTG...AGCAAGAGGGAAGGATTGGGCGAGAAAACAATGGAGAGGGGACCTGCGAAGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp GTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCATGGGTCCCCTCCCCACAAGATGTCCATGACTCCCTaGCTCTTTGTTGCCCATCTT +
Preference number: 4 (lower is better)
Translates to: VLLLGSRVVRIHGSPPHKMSMTP*LFVAHL
Trigger: AAGATGGGCAACAAAGAGCCAGGGAGTCATGGACAT...CTTGTGGGGAGGGGACCCATGAATCCTGACCACTCTTGAACCCAGAAGGAGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp ACAGGGCGATGCCATTGCAGACCCTCCCACTCCTGCTGGGGTCTTTGTAGAAGATGTCCCTTAAGCGCCTaGCTAAATAAGAGAGCCAGA +
Preference number: 4 (lower is better)
Translates to: TGRCHCRPSHSCWGLCRRCPLSA*LNKRAR
Trigger: TCTGGCTCTCTTATTTAGCCAGGCGCTTAAGGGACA...TCTTCTACAAAGACCCCAGCAGGAGTGGGAGGGTCTGCAATGGCATCGCCCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TGGTCAGGTGTTTTCCCAACTGTCCAGTGGACCTTAGGCCCTTTGGCCCAAGTGAGCTTTCAGAGCTACTaGAGGAGACGCTCAGATGAC +
Preference number: 4 (lower is better)
Translates to: WSGVFPTVQWTLGPLAQVSFQSY*RRRSDD
Trigger: GTCATCTGAGCGTCTCCTCCAGTAGCTCTGAAAGCT...CACTTGGGCCAAAGGGCCTAAGGTCCACTGGACAGTTGGGAAAACACCTGACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp GGGGAAGACACCCCGAGCTCAACAGCTGCCTGTTCTGACAGATCTCTTCCTATGAGGAATCCTGGCCATTaGTGTCCACAGCTTTCAGAG +
Preference number: 4 (lower is better)
Translates to: GEDTPSSTAACSDRSLPMRNPGH*CPQLSE
Trigger: CTCTGAAAGCTGTGGACACCAATGGCCAGGATTCCT...CATAGGAAGAGATCTGTCAGAACAGGCAGCTGTTGAGCTCGGGGTGTCTTCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TTCCTTCGCAGGTCCCCTCTCCATTGTTTTCTCGCCCAATCCTTCCCTCTTGCTGAACCACTTCTCACCTaGGCTATCGCTGAGACTCCA +
Preference number: 4 (lower is better)
Translates to: FLRRSPLHCFLAQSFPLAEPLLT*AIAETP
Trigger: TGGAGTCTCAGCGATAGCCCAGGTGAGAAGTGGTTC...AGCAAGAGGGAAGGATTGGGCGAGAAAACAATGGAGAGGGGACCTGCGAAGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TTGATTTCCCCTTGCAAAGCAGTTGAGTTAGGGAGACAGAGCTTTTCCATTCCCTCCGGGGCTCTCCTGTaGGGTGCAACAGGATGTCCG +
Preference number: 4 (lower is better)
Translates to: LISPCKAVELGRQSFSIPSGALL*GATGCP
Trigger: CGGACATCCTGTTGCACCCCACAGGAGAGCCCCGGA...GGGAATGGAAAAGCTCTGTCTCCCTAACTCAACTGCTTTGCAAGGGGAAATCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000430930.5
ENST00000446688.5
ENST00000646520.1
3UTR CAA 72 bp CTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATaGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGT +
Preference number: 4 (lower is better)
Translates to: LSPRCTFFSPPK*AQSPPSGFKSG
Trigger: ACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000615025.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp CTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCATCTCCATGTTTGGACTTaGGCATCTGCGCCACCTCAC +
Preference number: 4 (lower is better)
Translates to: LRNWPKVLLLGSRVVRIHLHVWT*ASAPPH
Trigger: GTGAGGTGGCGCAGATGCTCAAGTCCAAACATGGAG...ATGAATCCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp GTACAGGAGTGGGGACGCGTCAGTGTACAATACATTCATGTCCAGGATAAGGAGCTCCATGTTTGGACTTaGGCATCTGCGCCACCTCAC +
Preference number: 4 (lower is better)
Translates to: VQEWGRVSVQYIHVQDKELHVWT*ASAPPH
Trigger: GTGAGGTGGCGCAGATGCTCAAGTCCAAACATGGAG...CTCCTTATCCTGGACATGAATGTATTGTACACTGACGCGTCCCCACTCCTGTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp CTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCATCGGAGAGCAGGCCACTaGAGTAATGCACGTACCTTC +
Preference number: 4 (lower is better)
Translates to: LRNWPKVLLLGSRVVRIHRRAGH*SNARTF
Trigger: GAAGGTACGTGCATTACTTCAGTGGCCTGCTCTCCG...ATGAATCCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp GGACAGGAGCCCCAACATGAAGTTCTCAGTGCAAAGCTTTGGATTCTGGCTTGGGCTTGTTGTTCATTTTaGTGGAGCCGGAGAGCAGGC +
Preference number: 4 (lower is better)
Translates to: GQEPQHEVLSAKLWILAWACCSF*WSRRAG
Trigger: GCCTGCTCTCCGGCTCCATCAAAATGAACAACAAGC...CCAAGCCAGAATCCAAAGCTTTGCACTGAGAACTTCATGTTGGGGCTCCTGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310858.10
CDS-3UTR TCA 90 bp TCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATGCTTGTTGTTCATTTTaGTGGAGCCGGAGAGCAGGC +
Preference number: 4 (lower is better)
Translates to: SPPKLAQSPPSGFKSGQDACCSF*WSRRAG
Trigger: GCCTGCTCTCCGGCTCCATCAAAATGAACAACAAGC...ATCCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp TTGGGTTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTCTCCTCCATACTGCACACGGAAGATaGCGTCTCGGGCTGGGCTTC +
Preference number: 4 (lower is better)
Translates to: LGFCSFHLPRGIQVLLLHTAHGR*RLGLGF
Trigger: GAAGCCCAGCCCGAGACGTCATCTTCCGTGTGCAGT...ATGGAGGAGAAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAACCCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp TCTAGATCAATGTGTGAGGATGTGGGTGCAGACACACACCCACACGACAATATAACTGCACACGGAAGATaGCGTCTCGGGCTGGGCTTC +
Preference number: 4 (lower is better)
Translates to: SRSMCEDVGADTHPHDNITAHGR*RLGLGF
Trigger: GAAGCCCAGCCCGAGACGTCATCTTCCGTGTGCAGT...TATATTGTCGTGTGGGTGTGTGTCTGCACCCACATCCTCACACATTGATCTAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp AGAACAAATTCGCTCCAGCCTCTGCTTTCTGCTTGGCCGCTCAGCGCCCGGGGAGAAATCGATCATCTTTaGAAGCATCATCAAGGTCCT +
Preference number: 4 (lower is better)
Translates to: RTNSLQPLLSAWPLSARGEIDHL*KHHQGP
Trigger: AGGACCTTGATGATGCTTTCAAAGATGATCGATTTC...TCCCCGGGCGCTGAGCGGCCAAGCAGAAAGCAGAGGCTGGAGCGAATTTGTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453356.1
CDS-3UTR TCA 90 bp GTGAGGAAGGGAAAAGCGACCGTGAAAGCTGACCCCAGACTCAGTCCTGGGCCCGAAATCGATCATCTTTaGAAGCATCATCAAGGTCCT +
Preference number: 4 (lower is better)
Translates to: VRKGKATVKADPRLSPGPEIDHL*KHHQGP
Trigger: AGGACCTTGATGATGCTTTCAAAGATGATCGATTTC...GGGCCCAGGACTGAGTCTGGGGTCAGCTTTCACGGTCGCTTTTCCCTTCCTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp CCCAGCTTGATTTCCCCTTGCAAAGCAGTTGAGTTAGGGAGACAGAGCTTTTCCCATCTCGATGCCCACTaGAGTTGTCGTAGGAGTCCC +
Preference number: 4 (lower is better)
Translates to: PSLISPCKAVELGRQSFSHLDAH*SCRRSP
Trigger: GGGACTCCTACGACAACTTCAGTGGGCATCGAGATG...GGAAAAGCTCTGTCTCCCTAACTCAACTGCTTTGCAAGGGGAAATCAAGCTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp ACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTCTAACGCCCCACCATTaGCATGAACCTGGGCTGGGA +
Preference number: 4 (lower is better)
Translates to: TFFSPPKLAQSPPSGFKSLTPHH*HEPGLG
Trigger: TCCCAGCCCAGGTTCATGTCAATGGTGGGGCGTTAG...ACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp GATCTAGATCAATGTGTGAGGATGTGGGTGCAGACACACACCCACACGACAATACCTCACTGGTGTTGGTaGCCCCGTCCAGAGAAGAGA +
Preference number: 4 (lower is better)
Translates to: DLDQCVRMWVQTHTHTTIPHWCW*PRPEKR
Trigger: TCTCTTCTCTGGACGGGGTCACCAACACCAGTGAGG...TATTGTCGTGTGGGTGTGTGTCTGCACCCACATCCTCACACATTGATCTAGATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp TCTCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGAGAGGCTGGGCTCTTTaGATGGAAATCCTGGTTAGG +
Preference number: 4 (lower is better)
Translates to: SLLRNWPKVLLLGSRVVRRGWAL*MEILVR
Trigger: CCTAACCAGGATTTCCATTCAAAGAGCCCAGCCTCT...CCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp ACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTATGTCCGCTGGGTTGTaGGGTTTCAGGCCCAGAGCA +
Preference number: 4 (lower is better)
Translates to: TFFSPPKLAQSPPSGFKSMSAGL*GFRPRA
Trigger: TGCTCTGGGCCTGAAACCTCACAACCCAGCGGACAT...ACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp TCTGCAATTCACTTCCCTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATTATGTCCGCTGGGTTGTaGGGTTTCAGGCCCAGAGCA +
Preference number: 4 (lower is better)
Translates to: SAIHFPLPTLHFLLSSEIMSAGL*GFRPRA
Trigger: TGCTCTGGGCCTGAAACCTCACAACCCAGCGGACAT...AATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGGGAAGTGAATTGCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp TTGGAGGCTTTGGGTTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTAAGTGCTGTCAGCACTaGGGATGGGGCTGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: LEALGFCSFHLPRGIQVLKCCQH*GWGCWW
Trigger: CCACCAGCAGCCCCATCCTCAGTGCTGACAGCACTT...AAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAACCCAAAGCCTCCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp AATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCATGGGTCCGCTGAAATGCTGAAGTaGGTAGTCGGGGCTGCTGTA +
Preference number: 4 (lower is better)
Translates to: NWPKVLLLGSRVVRIHGSAEMLK*VVGAAV
Trigger: TACAGCAGCCCCGACTACTCACTTCAGCATTTCAGC...GGACCCATGAATCCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp ATGTCCCACGGTGGCTCTGTTTGGTTTGACAACCTACCCCACAGGTGGCCAGAATTTCCGGAGAGGAGCTaGAATGCTGAAGTGAGTAGT +
Preference number: 4 (lower is better)
Translates to: MSHGGSVWFDNLPHRWPEFPERS*NAEVSS
Trigger: ACTACTCACTTCAGCATTTCAGCTCCTCTCCGGAAA...TTCTGGCCACCTGTGGGGTAGGTTGTCAAACCAAACAGAGCCACCGTGGGACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp CCTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCCTCCTTTCCGGAGAGGAGCTaGAATGCTGAAGTGAGTAGT +
Preference number: 4 (lower is better)
Translates to: PLPTLHFLLSSEIGPKSSFPERS*NAEVSS
Trigger: ACTACTCACTTCAGCATTTCAGCTCCTCTCCGGAAA...GGAGGACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp TCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATGCTATTGCATTGCTATaGAGACCGGAGGCCAGGTTG +
Preference number: 4 (lower is better)
Translates to: SPPKLAQSPPSGFKSGQDAIALL*RPEARL
Trigger: CAACCTGGCCTCCGGTCTTCATAGCAATGCAATAGC...ATCCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp TTGGGTTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTCTCCTCCATTGCCCGGTCTCCCACTaGCATCCTTCGCTTCTCTGG +
Preference number: 4 (lower is better)
Translates to: LGFCSFHLPRGIQVLLLHCPVSH*HPSLLW
Trigger: CCAGAGAAGCGAAGGATGTCAGTGGGAGACCGGGCA...ATGGAGGAGAAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAACCCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp TCTCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGAAGACACCTTCCCATTaGTGGTGGCATAGTTGGGGA +
Preference number: 4 (lower is better)
Translates to: SLLRNWPKVLLLGSRVVRKTPSH*WWHSWG
Trigger: TCCCCAACTATGCCACCATCAATGGGAAGGTGTCTT...CCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp TTGATTTCCCCTTGCAAAGCAGTTGAGTTAGGGAGACAGAGCTTTTCCATTCCCGCGCCTCGGAAGGAGTaGCTGTCGCGGATGATGAAG +
Preference number: 4 (lower is better)
Translates to: LISPCKAVELGRQSFSIPAPRKE*LSRMMK
Trigger: CTTCATCATCCGCGACAGTCACTCCTTCCGAGGCGC...GGGAATGGAAAAGCTCTGTCTCCCTAACTCAACTGCTTTGCAAGGGGAAATCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp ATGTCCCACGGTGGCTCTGTTTGGTTTGACAACCTACCCCACAGGTGGCCAGAATTTTATTCTGCTGCATaGTGGTTGGAGGTGGCGAAG +
Preference number: 4 (lower is better)
Translates to: MSHGGSVWFDNLPHRWPEFYSAA*WLEVAK
Trigger: CTTCGCCACCTCCAACCATCATGCAGCAGAATAAAA...TTCTGGCCACCTGTGGGGTAGGTTGTCAAACCAAACAGAGCCACCGTGGGACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp GGGGAAGACACCCCGAGCTCAACAGCTGCCTGTTCTGACAGATCTCTTCCTATGTTTTATTCTGCTGCATaGTGGTTGGAGGTGGCGAAG +
Preference number: 4 (lower is better)
Translates to: GEDTPSSTAACSDRSLPMFYSAA*WLEVAK
Trigger: CTTCGCCACCTCCAACCATCATGCAGCAGAATAAAA...CATAGGAAGAGATCTGTCAGAACAGGCAGCTGTTGAGCTCGGGGTGTCTTCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp TCTCCTGGCCAGTCTCAGAAGACCCAGGGATCCTCAAAAACCAGGGGAGAAGGACTATCAGAAAATGCCTaGCCAGCTCATGGGTCATGT +
Preference number: 4 (lower is better)
Translates to: SPGQSQKTQGSSKTRGEGLSENA*PAHGSC
Trigger: ACATGACCCATGAGCTGGTCAGGCATTTTCTGATAG...TCCTTCTCCCCTGGTTTTTGAGGATCCCTGGGTCTTCTGAGACTGGCCAGGAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp TGGTCAGGTGTTTTCCCAACTGTCCAGTGGACCTTAGGCCCTTTGGCCCAAGTGCTATCAGAAAATGCCTaGCCAGCTCATGGGTCATGT +
Preference number: 4 (lower is better)
Translates to: WSGVFPTVQWTLGPLAQVLSENA*PAHGSC
Trigger: ACATGACCCATGAGCTGGTCAGGCATTTTCTGATAG...CACTTGGGCCAAAGGGCCTAAGGTCCACTGGACAGTTGGGAAAACACCTGACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp CCCAGCTTGATTTCCCCTTGCAAAGCAGTTGAGTTAGGGAGACAGAGCTTTTCCCTGTGGCCCAGTGAGTaGCTCCATGTCCACAGAGTT +
Preference number: 4 (lower is better)
Translates to: PSLISPCKAVELGRQSFSLWPSE*LHVHRV
Trigger: AACTCTGTGGACATGGAGTCACTCACTGGGCCACAG...GGAAAAGCTCTGTCTCCCTAACTCAACTGCTTTGCAAGGGGAAATCAAGCTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp CCCAGCTTGATTTCCCCTTGCAAAGCAGTTGAGTTAGGGAGACAGAGCTTTTCCCCTGGGCAGAGACTTTaGAGTGAACGATGGTGGCAG +
Preference number: 4 (lower is better)
Translates to: PSLISPCKAVELGRQSFSPGQRL*SERWWQ
Trigger: CTGCCACCATCGTTCACTTCAAAGTCTCTGCCCAGG...GGAAAAGCTCTGTCTCCCTAACTCAACTGCTTTGCAAGGGGAAATCAAGCTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp CCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGGAGGGTAGTGGCGTCTaGAAAAGAGCTTTCTCTGGT +
Preference number: 4 (lower is better)
Translates to: PRCTFFSPPKLAQSPPSGEGSGV*KRAFSG
Trigger: ACCAGAGAAAGCTCTTTTTCAGACGCCACTACCCTC...CCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp TTGGGTTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTCTCCTCCATCCTTGGAGACGAAGTTaGCGATGGCAGAGGCCGGCT +
Preference number: 4 (lower is better)
Translates to: LGFCSFHLPRGIQVLLLHPWRRS*RWQRPA
Trigger: AGCCGGCCTCTGCCATCGTCAACTTCGTCTCCAAGG...ATGGAGGAGAAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAACCCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp AATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCATGGGTCCTGGCTCTGTTTGGTTTaGCAACCTACCCCACAGGTG +
Preference number: 4 (lower is better)
Translates to: NWPKVLLLGSRVVRIHGSWLCLV*QPTPQV
Trigger: CACCTGTGGGGTAGGTTGTCAAACCAAACAGAGCCA...GGACCCATGAATCCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp ATGTCCCACGGTGGCTCTGTTTGGTTTGACAACCTACCCCACAGGTGGCCAGAAGAGGTGCCTTGGGTCTaGGATACTTTCAAGCAAACA +
Preference number: 4 (lower is better)
Translates to: MSHGGSVWFDNLPHRWPEEVPWV*DTFKQT
Trigger: TGTTTGCTTGAAAGTATCTCAGACCCAAGGCACCTC...TTCTGGCCACCTGTGGGGTAGGTTGTCAAACCAAACAGAGCCACCGTGGGACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp GGGGAAGACACCCCGAGCTCAACAGCTGCCTGTTCTGACAGATCTCTTCCTATGGAGGTGCCTTGGGTCTaGGATACTTTCAAGCAAACA +
Preference number: 4 (lower is better)
Translates to: GEDTPSSTAACSDRSLPMEVPWV*DTFKQT
Trigger: TGTTTGCTTGAAAGTATCTCAGACCCAAGGCACCTC...CATAGGAAGAGATCTGTCAGAACAGGCAGCTGTTGAGCTCGGGGTGTCTTCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp ATGCGCACACACGTCCTGTGTTACCACTGGCCAAGGAAACGCGAGTCTCAGGATAACAGCTGCCTGTTCTaGCAGATCTCTTCCTATGGA +
Preference number: 4 (lower is better)
Translates to: MRTHVLCYHWPRKRESQDNSCLF*QISSYG
Trigger: TCCATAGGAAGAGATCTGTCAGAACAGGCAGCTGTT...ATCCTGAGACTCGCGTTTCCTTGGCCAGTGGTAACACAGGACGTGTGTGCGCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp GAAATCTTTGGCAAGAATATACTGCAGTGCGGAGTGTTGTGTGTGCGTAGGTGTGGGCCCCTGGCTTGCTaGAAAGTAAGGGGGCCAAAG +
Preference number: 4 (lower is better)
Translates to: EIFGKNILQCGVLCVRRCGPLAC*KVRGPK
Trigger: CTTTGGCCCCCTTACTTTTCAGCAAGCCAGGGGCCC...ACACCTACGCACACACAACACTCCGCACTGCAGTATATTCTTGCCAAAGATTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp AATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCATGGGTCCACCGTGATAGCAGGCTaGTCAAACCGCTCACTTCCT +
Preference number: 4 (lower is better)
Translates to: NWPKVLLLGSRVVRIHGSTVIAG*SNRSLP
Trigger: AGGAAGTGAGCGGTTTGATCAGCCTGCTATCACGGT...GGACCCATGAATCCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp GCTATCGCTGAGACTCCACCAATTGGTTGGCCTACAGGCCTCACCTCCCGACTCAGTTCCCTAAAGAAATaGGCAAAACACACGCACACA +
Preference number: 4 (lower is better)
Translates to: AIAETPPIGWPTGLTSRLSSLKK*AKHTHT
Trigger: TGTGTGCGTGTGTTTTGCTCATTTCTTTAGGGAACT...GAGTCGGGAGGTGAGGCCTGTAGGCCAACCAATTGGTGGAGTCTCAGCGATAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp CCCAGCTTGATTTCCCCTTGCAAAGCAGTTGAGTTAGGGAGACAGAGCTTTTCCTCTCCTCATTGGCTGTaGTGGGGAAGGAGACAGCGA +
Preference number: 4 (lower is better)
Translates to: PSLISPCKAVELGRQSFSSPHWL*WGRRQR
Trigger: TCGCTGTCTCCTTCCCCAGCACAGCCAATGAGGAGA...GGAAAAGCTCTGTCTCCCTAACTCAACTGCTTTGCAAGGGGAAATCAAGCTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp CACAGGGCAGAGTCCAGGAGCCAGAACACTTCCTTGGCTTGGAAAAGGAAAAAGTGGCCTTACAGATGCTaGAGATCTTCTCCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: HRAESRSQNTSLAWKRKKWPYRC*RSSPGL
Trigger: CAGCCCTGGAGAAGATCTGCAGCATCTGTAAGGCCA...CTTTTTCCTTTTCCAAGCCAAGGAAGTGTTCTGGCTCCTGGACTCTGCCCTGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310858.10
CDS-3UTR GCA 90 bp GACAGGAGCCCCAACATGAAGTTCTCAGTGCAAAGCTTTGGATTCTGGCTTGGCCCATGGCCTTACAGATaGTGCAGATCTTCTCCAGGG +
Preference number: 4 (lower is better)
Translates to: DRSPNMKFSVQSFGFWLGPWPYR*CRSSPG
Trigger: CCCTGGAGAAGATCTGCAGCATCTGTAAGGCCATGG...GCCAAGCCAGAATCCAAAGCTTTGCACTGAGAACTTCATGTTGGGGCTCCTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310858.10
CDS-3UTR GCA 90 bp CACAGGGCAGAGTCCAGGAGCCAGAACACTTCCTTGGCTTGGAAAAGGAAAAAGAAGTTGGGGATGCCGTaGATGATCACGTGGTGCAGA +
Preference number: 4 (lower is better)
Translates to: HRAESRSQNTSLAWKRKKKLGMP*MITWCR
Trigger: TCTGCACCACGTGATCATGCACGGCATCCCCAACTT...CTTTTTCCTTTTCCAAGCCAAGGAAGTGTTCTGGCTCCTGGACTCTGCCCTGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000310858.10
CDS-3UTR GCA 90 bp CTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCATGCATGGCCTGGTAGATaGGGAGAAATGGCCGACATC +
Preference number: 4 (lower is better)
Translates to: LRNWPKVLLLGSRVVRIHAWPGR*GEMADI
Trigger: GATGTCGGCCATTTCTCCGCATCTACCAGGCCATGC...ATGAATCCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp GGGCGATGCCATTGCAGACCCTCCCACTCCTGCTGGGGTCTTTGTAGAAGAGAACTGGGATGTTGTAGATaGCAGATGTGTACACAGGTT +
Preference number: 4 (lower is better)
Translates to: GRCHCRPSHSCWGLCRRELGCCR*QMCTQV
Trigger: AACCTGTGTACACATCTGGCATCTACAACATCCCAG...TTCTCTTCTACAAAGACCCCAGCAGGAGTGGGAGGGTCTGCAATGGCATCGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp GTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCATGGGTCCCCTCCCCACAAGCTGGGATGTTGTAGATaGCAGATGTGTACACAGGTT +
Preference number: 4 (lower is better)
Translates to: VLLLGSRVVRIHGSPPHKLGCCR*QMCTQV
Trigger: AACCTGTGTACACATCTGGCATCTACAACATCCCAG...CTTGTGGGGAGGGGACCCATGAATCCTGACCACTCTTGAACCCAGAAGGAGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp GGACAGGAGCCCCAACATGAAGTTCTCAGTGCAAAGCTTTGGATTCTGGCTTGGGCACAGGTGTGGAACTaGACACGGAAGATGACGTCT +
Preference number: 4 (lower is better)
Translates to: GQEPQHEVLSAKLWILAWAQVWN*TRKMTS
Trigger: AGACGTCATCTTCCGTGTGCAGTTCCACACCTGTGC...CCAAGCCAGAATCCAAAGCTTTGCACTGAGAACTTCATGTTGGGGCTCCTGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310858.10
CDS-3UTR GCA 90 bp CTTCCCTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCTCTCCAGGTGCTCCATaGCTTGAATTTTCTCTGGCC +
Preference number: 4 (lower is better)
Translates to: LPSPHVALSSLLRNWPKVSPGAP*LEFSLA
Trigger: GGCCAGAGAAAATTCAAGGCATGGAGCACCTGGAGA...GACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGGGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp TTGGAGGCTTTGGGTTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTCCACCACCTCCTCCATaGCGTCATCTCGATGCCCAC +
Preference number: 4 (lower is better)
Translates to: LEALGFCSFHLPRGIQVLPPPPP*RHLDAH
Trigger: GTGGGCATCGAGATGACGGCATGGAGGAGGTGGTGG...AAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAACCCAAAGCCTCCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp TTGGGTTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTCTCCTCCATCCACCACCTCCTCCATaGCGTCATCTCGATGCCCAC +
Preference number: 4 (lower is better)
Translates to: LGFCSFHLPRGIQVLLLHPPPPP*RHLDAH
Trigger: GTGGGCATCGAGATGACGGCATGGAGGAGGTGGTGG...ATGGAGGAGAAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAACCCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp TTGGGTTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTCTCCTCCATGCCCCGGTGCTGCCGTaGAGGGAGTCTTTCTTCTTC +
Preference number: 4 (lower is better)
Translates to: LGFCSFHLPRGIQVLLLHAPVLP*RESFFF
Trigger: GAAGAAGAAAGACTCCCTGCACGGCAGCACCGGGGC...ATGGAGGAGAAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAACCCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp TCTAGATCAATGTGTGAGGATGTGGGTGCAGACACACACCCACACGACAATATATGGAGGCTGTGGAGTTaGCCGAGTCGCTGCTCACAG +
Preference number: 4 (lower is better)
Translates to: SRSMCEDVGADTHPHDNIWRLWS*PSRCSQ
Trigger: CTGTGAGCAGCGACTCGGGCAACTCCACAGCCTCCA...TATATTGTCGTGTGGGTGTGTGTCTGCACCCACATCCTCACACATTGATCTAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp TCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTGGTACATGGCGCCTTaGTTCTCTCGCTCTAAGCCA +
Preference number: 4 (lower is better)
Translates to: SPPKLAQSPPSGFKSGQDWYMAP*FSRSKP
Trigger: TGGCTTAGAGCGAGAGAAGCAAGGCGCCATGTACCA...ATCCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp GATCTAGATCAATGTGTGAGGATGTGGGTGCAGACACACACCCACACGACAATATGCTGCTGCTGCTGCTaGTGCCACGAATTCAGTCCC +
Preference number: 4 (lower is better)
Translates to: DLDQCVRMWVQTHTHTTICCCCC*CHEFSP
Trigger: GGGACTGAATTCGTGGCAGCAGCAGCAGCAGCAGCA...TATTGTCGTGTGGGTGTGTGTCTGCACCCACATCCTCACACATTGATCTAGATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp ACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTTGCTGCTGCTGCTGCTaGTGCCACGAATTCAGTCCC +
Preference number: 4 (lower is better)
Translates to: TFFSPPKLAQSPPSGFKSCCCCC*CHEFSP
Trigger: GGGACTGAATTCGTGGCAGCAGCAGCAGCAGCAGCA...ACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp TTGGGTTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTCTCCTCCATAAGTGGGCTCTTTCCTaGTGGCGTGGAGGTGGGCGA +
Preference number: 4 (lower is better)
Translates to: LGFCSFHLPRGIQVLLLHKWALS*WRGGGR
Trigger: TCGCCCACCTCCACGCCAGCAGGAAAGAGCCCACTT...ATGGAGGAGAAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAACCCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp TCTGCAATTCACTTCCCTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATTGTGAGTAGTCGGGGCTaGTGTAGCTACTGCCCACAG +
Preference number: 4 (lower is better)
Translates to: SAIHFPLPTLHFLLSSEIVSSRG*CSYCPQ
Trigger: CTGTGGGCAGTAGCTACAGCAGCCCCGACTACTCAC...AATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGGGAAGTGAATTGCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp TTGGGTTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTCTCCTCCATGGGGGCTGGAGACAGTaGTACCATGGAAGCCAGTGC +
Preference number: 4 (lower is better)
Translates to: LGFCSFHLPRGIQVLLLHGGWRQ*YHGSQC
Trigger: GCACTGGCTTCCATGGTAGCACTGTCTCCAGCCCCC...ATGGAGGAGAAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAACCCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp TCTAGATCAATGTGTGAGGATGTGGGTGCAGACACACACCCACACGACAATATAGGGGGCTGGAGACAGTaGTACCATGGAAGCCAGTGC +
Preference number: 4 (lower is better)
Translates to: SRSMCEDVGADTHPHDNIGGWRQ*YHGSQC
Trigger: GCACTGGCTTCCATGGTAGCACTGTCTCCAGCCCCC...TATATTGTCGTGTGGGTGTGTGTCTGCACCCACATCCTCACACATTGATCTAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp TCTCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGTCCAGGGCTGGCTATTaGATTGCTATGAAGACCGGA +
Preference number: 4 (lower is better)
Translates to: SLLRNWPKVLLLGSRVVRSRAGY*IAMKTG
Trigger: TCCGGTCTTCATAGCAATGCAATAGCCAGCCCTGGA...CCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp AGGTGCCTTGGGTCTGAGATACTTTCAAGCAAACAAGTTCTTCCACTTGATGTCGGTCCAAGCAGGGGCTaGCGGGAACCACAGATCCAG +
Preference number: 4 (lower is better)
Translates to: RCLGSEILSSKQVLPLDVGPSRG*REPQIQ
Trigger: CTGGATCTGTGGTTCCCGGCAGCCCCTGCTTGGACC...GACATCAAGTGGAAGAACTTGTTTGCTTGAAAGTATCTCAGACCCAAGGCACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp TTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTCTCCTCCATCTTTCGGTAGCCAGAGGCACTaGTCTGCCGGGACAGTGTGG +
Preference number: 4 (lower is better)
Translates to: FLQFPSTQGNPSSSPPSFGSQRH*SAGTVW
Trigger: CCACACTGTCCCGGCAGAGCAGTGCCTCTGGCTACC...GAAAGATGGAGGAGAAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp GTTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTCTCCTCCATCTTTGGTAGCCAGAGGCACTaGTCTGCCGGGACAGTGTGG +
Preference number: 4 (lower is better)
Translates to: VFAVSIYPGESKFFSSIFGSQRH*SAGTVW
Trigger: CCACACTGTCCCGGCAGAGCAGTGCCTCTGGCTACC...AAAGATGGAGGAGAAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp AGGTGCCTTGGGTCTGAGATACTTTCAAGCAAACAAGTTCTTCCACTTGATGTCCACTGGGACTGGACATaGCGCTGGCGACAGGCGAAG +
Preference number: 4 (lower is better)
Translates to: RCLGSEILSSKQVLPLDVHWDWT*RWRQAK
Trigger: CTTCGCCTGTCGCCAGCGGCATGTCCAGTCCCAGTG...GACATCAAGTGGAAGAACTTGTTTGCTTGAAAGTATCTCAGACCCAAGGCACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp TTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTCTCCTCCATCTTTCCACTGGGACTGGACATaGCGCTGGCGACAGGCGAAG +
Preference number: 4 (lower is better)
Translates to: FLQFPSTQGNPSSSPPSFHWDWT*RWRQAK
Trigger: CTTCGCCTGTCGCCAGCGGCATGTCCAGTCCCAGTG...GAAAGATGGAGGAGAAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp TTGGGTTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTCTCCTCCATAGAAGGAGACGGTGCTaGCCCCACTGGGACTGGACA +
Preference number: 4 (lower is better)
Translates to: LGFCSFHLPRGIQVLLLHRRRRC*PHWDWT
Trigger: TGTCCAGTCCCAGTGGGGGCAGCACCGTCTCCTTCT...ATGGAGGAGAAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAACCCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp TTGGAGGCTTTGGGTTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTAGAAGGAGACGGTGCTaGCCCCACTGGGACTGGACA +
Preference number: 4 (lower is better)
Translates to: LEALGFCSFHLPRGIQVLRRRRC*PHWDWT
Trigger: TGTCCAGTCCCAGTGGGGGCAGCACCGTCTCCTTCT...AAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAACCCAAAGCCTCCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp TGGTCAGGTGTTTTCCCAACTGTCCAGTGGACCTTAGGCCCTTTGGCCCAAGTGGTCTCTATCAGAAAATaGCTGACCAGCTCATGGGTC +
Preference number: 4 (lower is better)
Translates to: WSGVFPTVQWTLGPLAQVVSIRK*LTSSWV
Trigger: GACCCATGAGCTGGTCAGGCATTTTCTGATAGAGAC...CACTTGGGCCAAAGGGCCTAAGGTCCACTGGACAGTTGGGAAAACACCTGACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp CCATTCTGGCTTAGAGTCCTTAAATGGTGGTCAGGTGTTTTCCCAACTGTCCAGAGCTGGCGTGGGGTCTaGAGCCAACGTCTCAGATGT +
Preference number: 4 (lower is better)
Translates to: PFWLRVLKWWSGVFPTVQSWRGV*SQRLRC
Trigger: ACATCTGAGACGTTGGCTGCAGACCCCACGCCAGCT...CTGGACAGTTGGGAAAACACCTGACCACCATTTAAGGACTCTAAGCCAGAATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp CTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCATTTTCCCCCTCCCCTCTaGAATTCACTTCCCTCTCCC +
Preference number: 4 (lower is better)
Translates to: LRNWPKVLLLGSRVVRIHFPPPL*NSLPSP
Trigger: GGGAGAGGGAAGTGAATTGCAGAGGGGAGGGGGAAA...ATGAATCCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp TGGTCAGGTGTTTTCCCAACTGTCCAGTGGACCTTAGGCCCTTTGGCCCAAGTGCAAAGAGACCTGAGGTaGCTTGGGTCTGAGATACTT +
Preference number: 4 (lower is better)
Translates to: WSGVFPTVQWTLGPLAQVQRDLR*LGSEIL
Trigger: AAGTATCTCAGACCCAAGGCACCTCAGGTCTCTTTG...CACTTGGGCCAAAGGGCCTAAGGTCCACTGGACAGTTGGGAAAACACCTGACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp AAGAGAAGGGTCTGGCGGCACCCAGGGTCACTAGAGTGCAGGTGCAGGCACCAGAATCTTTGGACAGTATaGATGTGTGTCTACAAACAC +
Preference number: 4 (lower is better)
Translates to: KRRVWRHPGSLECRCRHQNLWTV*MCVYKH
Trigger: GTGTTTGTAGACACACATGCATACTGTCCAAAGATT...CTGGTGCCTGCACCTGCACTCTAGTGACCCTGGGTGCCGCCAGACCCTTCTCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp TTGGAGGCTTTGGGTTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTCCAGGGTCACTAGAGTaGAGGTGCAGGCACCAGGAG +
Preference number: 4 (lower is better)
Translates to: LEALGFCSFHLPRGIQVLPGSLE*RCRHQE
Trigger: CTCCTGGTGCCTGCACCTGCACTCTAGTGACCCTGG...AAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAACCCAAAGCCTCCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp GCAATTCACTTCCCTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCAGACCCTCCCACTCCTaGTGGGGTCTTTGTAGAAGA +
Preference number: 4 (lower is better)
Translates to: AIHFPLPTLHFLLSSEIGRPSHS*WGLCRR
Trigger: TCTTCTACAAAGACCCCAGCAGGAGTGGGAGGGTCT...GCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGGGAAGTGAATTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp AATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCATGGGTCCAGACCCTCCCACTCCTaGTGGGGTCTTTGTAGAAGA +
Preference number: 4 (lower is better)
Translates to: NWPKVLLLGSRVVRIHGSRPSHS*WGLCRR
Trigger: TCTTCTACAAAGACCCCAGCAGGAGTGGGAGGGTCT...GGACCCATGAATCCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp CCATTCTGGCTTAGAGTCCTTAAATGGTGGTCAGGTGTTTTCCCAACTGTCCAGGCTGAGGTCAGAGGGTaGCTGCAAAAGCCAGACCCT +
Preference number: 4 (lower is better)
Translates to: PFWLRVLKWWSGVFPTVQAEVRG*LQKPDP
Trigger: AGGGTCTGGCTTTTGCAGGCACCCTCTGACCTCAGC...CTGGACAGTTGGGAAAACACCTGACCACCATTTAAGGACTCTAAGCCAGAATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp ATGTCCAGGATAAGGAGCATACACCAGGATTTATACACGGTGGCAGCGGCTATACAAGTGCAAGCCTTCTaGCCTCTGCTGCATGGGCAG +
Preference number: 4 (lower is better)
Translates to: MSRIRSIHQDLYTVAAAIQVQAF*PLLHGQ
Trigger: CTGCCCATGCAGCAGAGGGCAGAAGGCTTGCACTTG...TATAGCCGCTGCCACCGTGTATAAATCCTGGTGTATGCTCCTTATCCTGGACAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp TCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATACACGCACCTATGTGTaGCATACACACCCATGTCCC +
Preference number: 4 (lower is better)
Translates to: SPPKLAQSPPSGFKSGQDTRTYV*HTHPCP
Trigger: GGGACATGGGTGTGTATGGCACACATAGGTGCGTGT...ATCCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp GTACAGGAGTGGGGACGCGTCAGTGTACAATACATTCATGTCCAGGATAAGGAGACGAGAAGAGGTACTTaGCCCATCGGATCACGCAGG +
Preference number: 4 (lower is better)
Translates to: VQEWGRVSVQYIHVQDKETRRGT*PIGSRR
Trigger: CCTGCGTGATCCGATGGGGCAAGTACCTCTTCTCGT...CTCCTTATCCTGGACATGAATGTATTGTACACTGACGCGTCCCCACTCCTGTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646520.1
CDS-3UTR CCA 90 bp TTGGGTTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTCTCCTCCATCAGCTCATGGTTGGATaGAGGAACGCAGGGGGCAGC +
Preference number: 4 (lower is better)
Translates to: LGFCSFHLPRGIQVLLLHQLMVG*RNAGGS
Trigger: GCTGCCCCCTGCGTTCCTCCATCCAACCATGAGCTG...ATGGAGGAGAAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAACCCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TCTAGATCAATGTGTGAGGATGTGGGTGCAGACACACACCCACACGACAATATACAGCTCATGGTTGGATaGAGGAACGCAGGGGGCAGC +
Preference number: 4 (lower is better)
Translates to: SRSMCEDVGADTHPHDNIQLMVG*RNAGGS
Trigger: GCTGCCCCCTGCGTTCCTCCATCCAACCATGAGCTG...TATATTGTCGTGTGGGTGTGTGTCTGCACCCACATCCTCACACATTGATCTAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTCTCCTCCATCTTTCTCCAGGGCTGGGGTGTaGAGGTCGGGCCAGCCAAAT +
Preference number: 4 (lower is better)
Translates to: FLQFPSTQGNPSSSPPSFSRAGV*RSGQPN
Trigger: ATTTGGCTGGCCCGACCTCCACACCCCAGCCCTGGA...GAAAGATGGAGGAGAAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp CACAGGGCAGAGTCCAGGAGCCAGAACACTTCCTTGGCTTGGAAAAGGAAAAAGGAGCCTGGTCCGCACTaGCAGAAATGTTGCTGTAGT +
Preference number: 4 (lower is better)
Translates to: HRAESRSQNTSLAWKRKKEPGPH*QKCCCS
Trigger: ACTACAGCAACATTTCTGCCAGTGCGGACCAGGCTC...CTTTTTCCTTTTCCAAGCCAAGGAAGTGTTCTGGCTCCTGGACTCTGCCCTGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310858.10
CDS-3UTR CCA 90 bp ATGTCCAGGATAAGGAGCATACACCAGGATTTATACACGGTGGCAGCGGCTATAAACCGGTCCAGAGCCTaGTCCGCACTGGCAGAAATG +
Preference number: 4 (lower is better)
Translates to: MSRIRSIHQDLYTVAAAINRSRA*SALAEM
Trigger: CATTTCTGCCAGTGCGGACCAGGCTCTGGACCGGTT...TATAGCCGCTGCCACCGTGTATAAATCCTGGTGTATGCTCCTTATCCTGGACAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp CTTCCCTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCGGGATGGCTGGCCAATaGGCACAATCTTATCCTCAT +
Preference number: 4 (lower is better)
Translates to: LPSPHVALSSLLRNWPKVGMAGQ*AQSYPH
Trigger: ATGAGGATAAGATTGTGCCCATTGGCCAGCCATCCC...GACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGGGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp CCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGGGGATGGCTGGCCAATaGGCACAATCTTATCCTCAT +
Preference number: 4 (lower is better)
Translates to: PRCTFFSPPKLAQSPPSGGMAGQ*AQSYPH
Trigger: ATGAGGATAAGATTGTGCCCATTGGCCAGCCATCCC...CCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGG
52% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp CCCAGCTTGATTTCCCCTTGCAAAGCAGTTGAGTTAGGGAGACAGAGCTTTTCCTGCACGTACCTTCTTTaGGATGGCTGGCCAATGGGC +
Preference number: 4 (lower is better)
Translates to: PSLISPCKAVELGRQSFSCTYLL*DGWPMG
Trigger: GCCCATTGGCCAGCCATCCCAAAGAAGGTACGTGCA...GGAAAAGCTCTGTCTCCCTAACTCAACTGCTTTGCAAGGGGAAATCAAGCTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp CTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCATTGCACGTACCTTCTTTaGGATGGCTGGCCAATGGGC +
Preference number: 4 (lower is better)
Translates to: LRNWPKVLLLGSRVVRIHCTYLL*DGWPMG
Trigger: GCCCATTGGCCAGCCATCCCAAAGAAGGTACGTGCA...ATGAATCCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp GGGGAAGACACCCCGAGCTCAACAGCTGCCTGTTCTGACAGATCTCTTCCTATGGTAGATGCGGAGAAATaGCCGACATCCTCCTTTAGA +
Preference number: 4 (lower is better)
Translates to: GEDTPSSTAACSDRSLPMVDAEK*PTSSFR
Trigger: TCTAAAGGAGGATGTCGGCCATTTCTCCGCATCTAC...CATAGGAAGAGATCTGTCAGAACAGGCAGCTGTTGAGCTCGGGGTGTCTTCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp GACAGGAGCCCCAACATGAAGTTCTCAGTGCAAAGCTTTGGATTCTGGCTTGGCCTTCAAGAGCAGTCCTaGCTCGATGGTGATGCAGAC +
Preference number: 4 (lower is better)
Translates to: DRSPNMKFSVQSFGFWLGLQEQS*LDGDAD
Trigger: GTCTGCATCACCATCGAGCCAGGACTGCTCTTGAAG...GCCAAGCCAGAATCCAAAGCTTTGCACTGAGAACTTCATGTTGGGGCTCCTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310858.10
CDS-3UTR CCA 90 bp TCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATCTTCAAGAGCAGTCCTaGCTCGATGGTGATGCAGAC +
Preference number: 4 (lower is better)
Translates to: SPPKLAQSPPSGFKSGQDLQEQS*LDGDAD
Trigger: GTCTGCATCACCATCGAGCCAGGACTGCTCTTGAAG...ATCCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp GACAGGAGCCCCAACATGAAGTTCTCAGTGCAAAGCTTTGGATTCTGGCTTGGCTGGATGGCACAGGTGTaGAACTGCACACGGAAGATG +
Preference number: 4 (lower is better)
Translates to: DRSPNMKFSVQSFGFWLGWMAQV*NCTRKM
Trigger: CATCTTCCGTGTGCAGTTCCACACCTGTGCCATCCA...GCCAAGCCAGAATCCAAAGCTTTGCACTGAGAACTTCATGTTGGGGCTCCTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310858.10
CDS-3UTR CCA 90 bp GTACAGGAGTGGGGACGCGTCAGTGTACAATACATTCATGTCCAGGATAAGGAGACAACCCCCAGGTCATaGATGGCACAGGTGTGGAAC +
Preference number: 4 (lower is better)
Translates to: VQEWGRVSVQYIHVQDKETTPRS*MAQVWN
Trigger: GTTCCACACCTGTGCCATCCATGACCTGGGGGTTGT...CTCCTTATCCTGGACATGAATGTATTGTACACTGACGCGTCCCCACTCCTGTAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TTGATTTCCCCTTGCAAAGCAGTTGAGTTAGGGAGACAGAGCTTTTCCATTCCCAGCTCCCGCTTCTCCTaGGGACTCAAGGCAGCAGTG +
Preference number: 4 (lower is better)
Translates to: LISPCKAVELGRQSFSIPSSRFS*GLKAAV
Trigger: CACTGCTGCCTTGAGTCCCCAGGAGAAGCGGGAGCT...GGGAATGGAAAAGCTCTGTCTCCCTAACTCAACTGCTTTGCAAGGGGAAATCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTCTCCTCCATCTTTCCGGGACCTGAGGTGCTaGGTGTGGTACATGGCGCCT +
Preference number: 4 (lower is better)
Translates to: FLQFPSTQGNPSSSPPSFRDLRC*VWYMAP
Trigger: AGGCGCCATGTACCACACCCAGCACCTCAGGTCCCG...GAAAGATGGAGGAGAAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp GAAATCTTTGGCAAGAATATACTGCAGTGCGGAGTGTTGTGTGTGCGTAGGTGTCAGACCGTTGGTCAGTaGGGACAGGGCCTCTGGGTA +
Preference number: 4 (lower is better)
Translates to: EIFGKNILQCGVLCVRRCQTVGQ*GQGLWV
Trigger: TACCCAGAGGCCCTGTCCCCACTGACCAACGGTCTG...ACACCTACGCACACACAACACTCCGCACTGCAGTATATTCTTGCCAAAGATTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TCTGCAATTCACTTCCCTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATTACTTGTCCAGACCGTTaGTCAGTGGGGACAGGGCCT +
Preference number: 4 (lower is better)
Translates to: SAIHFPLPTLHFLLSSEITCPDR*SVGTGP
Trigger: AGGCCCTGTCCCCACTGACCAACGGTCTGGACAAGT...AATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGGGAAGTGAATTGCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp AGGTGCCTTGGGTCTGAGATACTTTCAAGCAAACAAGTTCTTCCACTTGATGTCTCTTTCCTGCTGGCGTaGAGGTGGGCGAGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: RCLGSEILSSKQVLPLDVSFLLA*RWARLL
Trigger: CAGCAGCCTCGCCCACCTCCACGCCAGCAGGAAAGA...GACATCAAGTGGAAGAACTTGTTTGCTTGAAAGTATCTCAGACCCAAGGCACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp GATCTAGATCAATGTGTGAGGATGTGGGTGCAGACACACACCCACACGACAATAGAGGGCTGGGCCTGCTaGCTACAAGACTCTCCAAGT +
Preference number: 4 (lower is better)
Translates to: DLDQCVRMWVQTHTHTTIEGWAC*LQDSPS
Trigger: ACTTGGAGAGTCTTGTAGCCAGCAGGCCCAGCCCTC...TATTGTCGTGTGGGTGTGTGTCTGCACCCACATCCTCACACATTGATCTAGATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TCTGCAATTCACTTCCCTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATTTGTTCAATCTCCTGCTaGGAGGCTGCTCGCGGGAAC +
Preference number: 4 (lower is better)
Translates to: SAIHFPLPTLHFLLSSEICSISC*EAARGN
Trigger: GTTCCCGCGAGCAGCCTCCCAGCAGGAGATTGAACA...AATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGGGAAGTGAATTGCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp AATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCATGGGTCCGGATATAGCCAGATCTaGACTGGGTCAGTGGATGGG +
Preference number: 4 (lower is better)
Translates to: NWPKVLLLGSRVVRIHGSGYSQI*TGSVDG
Trigger: CCCATCCACTGACCCAGTCCAGATCTGGCTATATCC...GGACCCATGAATCCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp CCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGGCTGGGCTCTTTGAATaGAAATCCTGGTTAGGCCCA +
Preference number: 4 (lower is better)
Translates to: PRCTFFSPPKLAQSPPSGAGLFE*KSWLGP
Trigger: TGGGCCTAACCAGGATTTCCATTCAAAGAGCCCAGC...CCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp CTTCCCTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCAGGGGATGTGGCTTCTaGAGACTGGTTCTCATACTG +
Preference number: 4 (lower is better)
Translates to: LPSPHVALSSLLRNWPKVRGCGF*RLVLIL
Trigger: CAGTATGAGAACCAGTCTCCAGAAGCCACATCCCCT...GACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGGGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp CTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCATGGCTACGAGGGGATGTaGCTTCTGGAGACTGGTTCT +
Preference number: 4 (lower is better)
Translates to: LRNWPKVLLLGSRVVRIHGYEGM*LLETGS
Trigger: AGAACCAGTCTCCAGAAGCCACATCCCCTCGTAGCC...ATGAATCCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp CCCAGCTTGATTTCCCCTTGCAAAGCAGTTGAGTTAGGGAGACAGAGCTTTTCCCAACAGGATGTCCGCTaGGTTGTGAGGTTTCAGGCC +
Preference number: 4 (lower is better)
Translates to: PSLISPCKAVELGRQSFSQQDVR*VVRFQA
Trigger: GGCCTGAAACCTCACAACCCAGCGGACATCCTGTTG...GGAAAAGCTCTGTCTCCCTAACTCAACTGCTTTGCAAGGGGAAATCAAGCTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp CTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCATATAGGCCTGGGTGGCTaGAGCACTAAAGCTCTTGGG +
Preference number: 4 (lower is better)
Translates to: LRNWPKVLLLGSRVVRIHIGLGG*STKALG
Trigger: CCCAAGAGCTTTAGTGCTCCAGCCACCCAGGCCTAT...ATGAATCCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp GATCTAGATCAATGTGTGAGGATGTGGGTGCAGACACACACCCACACGACAATATCAAACTGGGACTGCTaGGGGCAGCCATGCTGGGAT +
Preference number: 4 (lower is better)
Translates to: DLDQCVRMWVQTHTHTTISNWDC*GQPCWD
Trigger: ATCCCAGCATGGCTGCCCCCAGCAGTCCCAGTTTGA...TATTGTCGTGTGGGTGTGTGTCTGCACCCACATCCTCACACATTGATCTAGATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp CTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCATGAGACAGTGCTACCATaGAAGCCAGTGCCTGGTGGA +
Preference number: 4 (lower is better)
Translates to: LRNWPKVLLLGSRVVRIHETVLP*KPVPGG
Trigger: TCCACCAGGCACTGGCTTCCATGGTAGCACTGTCTC...ATGAATCCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp GTACAGGAGTGGGGACGCGTCAGTGTACAATACATTCATGTCCAGGATAAGGAGGAGACAGTGCTACCATaGAAGCCAGTGCCTGGTGGA +
Preference number: 4 (lower is better)
Translates to: VQEWGRVSVQYIHVQDKEETVLP*KPVPGG
Trigger: TCCACCAGGCACTGGCTTCCATGGTAGCACTGTCTC...CTCCTTATCCTGGACATGAATGTATTGTACACTGACGCGTCCCCACTCCTGTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp GATCTAGATCAATGTGTGAGGATGTGGGTGCAGACACACACCCACACGACAATACACTGCTCTGGGGGCTaGAGACAGTGCTACCATGGA +
Preference number: 4 (lower is better)
Translates to: DLDQCVRMWVQTHTHTTIHCSGG*RQCYHG
Trigger: TCCATGGTAGCACTGTCTCCAGCCCCCAGAGCAGTG...TATTGTCGTGTGGGTGTGTGTCTGCACCCACATCCTCACACATTGATCTAGATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TTGATTTCCCCTTGCAAAGCAGTTGAGTTAGGGAGACAGAGCTTTTCCATTCCCGTCGCTGCACTGCTCTaGGGGCTGGAGACAGTGCTA +
Preference number: 4 (lower is better)
Translates to: LISPCKAVELGRQSFSIPVAALL*GLETVL
Trigger: TAGCACTGTCTCCAGCCCCCAGAGCAGTGCAGCGAC...GGGAATGGAAAAGCTCTGTCTCCCTAACTCAACTGCTTTGCAAGGGGAAATCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TTGGGTTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTCTCCTCCATTGGGACTCCCCGGGGTaGTGGCCACTTTGTTGTGGA +
Preference number: 4 (lower is better)
Translates to: LGFCSFHLPRGIQVLLLHWDSPG*WPLCCG
Trigger: TCCACAACAAAGTGGCCACCACCCCGGGGAGTCCCA...ATGGAGGAGAAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAACCCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp ACCCTCCTTTCCAACTCCCTGAAACAGAACGTCCACACTGACACAGCTCCTTGGTGGGGCTTCCAGGGCTaGCTATTGCATTGCTATGAA +
Preference number: 4 (lower is better)
Translates to: TLLSNSLKQNVHTDTAPWWGFQG*LLHCYE
Trigger: TTCATAGCAATGCAATAGCCAGCCCTGGAAGCCCCA...CCAAGGAGCTGTGTCAGTGTGGACGTTCTGTTTCAGGGAGTTGGAAAGGAGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp AGGTGCCTTGGGTCTGAGATACTTTCAAGCAAACAAGTTCTTCCACTTGATGTCCAGGGAAGGAGGGCGTaGAAGGAGCCTGGTAGCCAG +
Preference number: 4 (lower is better)
Translates to: RCLGSEILSSKQVLPLDVQGRRA*KEPGSQ
Trigger: CTGGCTACCAGGCTCCTTCCACGCCCTCCTTCCCTG...GACATCAAGTGGAAGAACTTGTTTGCTTGAAAGTATCTCAGACCCAAGGCACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TTGGGTTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTCTCCTCCATGACTGGACATGCCGCTaGCGACAGGCGAAGACACCT +
Preference number: 4 (lower is better)
Translates to: LGFCSFHLPRGIQVLLLHDWTCR*RQAKTP
Trigger: AGGTGTCTTCGCCTGTCGCCAGCGGCATGTCCAGTC...ATGGAGGAGAAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAACCCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TTGGAGGCTTTGGGTTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTGACTGGACATGCCGCTaGCGACAGGCGAAGACACCT +
Preference number: 4 (lower is better)
Translates to: LEALGFCSFHLPRGIQVLDWTCR*RQAKTP
Trigger: AGGTGTCTTCGCCTGTCGCCAGCGGCATGTCCAGTC...AAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAACCCAAAGCCTCCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TTGATTTCCCCTTGCAAAGCAGTTGAGTTAGGGAGACAGAGCTTTTCCATTCCCGACTGGACATGCCGCTaGCGACAGGCGAAGACACCT +
Preference number: 4 (lower is better)
Translates to: LISPCKAVELGRQSFSIPDWTCR*RQAKTP
Trigger: AGGTGTCTTCGCCTGTCGCCAGCGGCATGTCCAGTC...GGGAATGGAAAAGCTCTGTCTCCCTAACTCAACTGCTTTGCAAGGGGAAATCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TCTGCAATTCACTTCCCTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATTAAGTCGGGCAGAGTGTaGGAGAAGGAGACGGTGCTG +
Preference number: 4 (lower is better)
Translates to: SAIHFPLPTLHFLLSSEIKSGRV*EKETVL
Trigger: CAGCACCGTCTCCTTCTCCCACACTCTGCCCGACTT...AATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGGGAAGTGAATTGCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp GCAATTCACTTCCCTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCCTGGCATGGAGTACTTaGAGAAGTCGGGCAGAGTGT +
Preference number: 4 (lower is better)
Translates to: AIHFPLPTLHFLLSSEIGLAWST*RSRAEC
Trigger: ACACTCTGCCCGACTTCTCCAAGTACTCCATGCCAG...GCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGGGAAGTGAATTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp GCAGACCCTCCCACTCCTGCTGGGGTCTTTGTAGAAGAGAAGGGTCTGGCGGCATACTTAGAAGTGTCCTaGACAAACTTCACTTTAGCC +
Preference number: 4 (lower is better)
Translates to: ADPPTPAGVFVEEKGLAAYLEVS*TNFTLA
Trigger: GGCTAAAGTGAAGTTTGTCCAGGACACTTCTAAGTA...TGCCGCCAGACCCTTCTCTTCTACAAAGACCCCAGCAGGAGTGGGAGGGTCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp GTGAGGAAGGGAAAAGCGACCGTGAAAGCTGACCCCAGACTCAGTCCTGGGCCCTACTTAGAAGTGTCCTaGACAAACTTCACTTTAGCC +
Preference number: 4 (lower is better)
Translates to: VRKGKATVKADPRLSPGPYLEVS*TNFTLA
Trigger: GGCTAAAGTGAAGTTTGTCCAGGACACTTCTAAGTA...GGGCCCAGGACTGAGTCTGGGGTCAGCTTTCACGGTCGCTTTTCCCTTCCTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp GATCTAGATCAATGTGTGAGGATGTGGGTGCAGACACACACCCACACGACAATACGATGGCCTGCTCCCTaGAGATCTCAGGCTTGTACC +
Preference number: 4 (lower is better)
Translates to: DLDQCVRMWVQTHTHTTIRWPAP*RSQACT
Trigger: GGTACAAGCCTGAGATCTCCAGGGAGCAGGCCATCG...TATTGTCGTGTGGGTGTGTGTCTGCACCCACATCCTCACACATTGATCTAGATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp AGGTGCCTTGGGTCTGAGATACTTTCAAGCAAACAAGTTCTTCCACTTGATGTCGCGAAGACACCTTCATaGCCAGCCCGTACGCGCCTC +
Preference number: 4 (lower is better)
Translates to: RCLGSEILSSKQVLPLDVAKTPS*PARTRL
Trigger: GAGGCGCGTACGGGCTGGCCATGAAGGTGTCTTCGC...GACATCAAGTGGAAGAACTTGTTTGCTTGAAAGTATCTCAGACCCAAGGCACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp CTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCATCAGCGATCCGAAGTTTaGCTCATTGGGGCAGCCCTT +
Preference number: 4 (lower is better)
Translates to: LRNWPKVLLLGSRVVRIHQRSEV*LIGAAL
Trigger: AAGGGCTGCCCCAATGAGCCAAACTTCGGATCGCTG...ATGAATCCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTCTCCTCCATCTTTCTGGTGGCAGCTGGCGTaGGGTCTGCAGCCAACGTCT +
Preference number: 4 (lower is better)
Translates to: FLQFPSTQGNPSSSPPSFWWQLA*GLQPTS
Trigger: AGACGTTGGCTGCAGACCCCACGCCAGCTGCCACCA...GAAAGATGGAGGAGAAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp GATCTAGATCAATGTGTGAGGATGTGGGTGCAGACACACACCCACACGACAATAAGCTCAGCAAAGAGGTaGCAGGCGTTGTCCGTGGTG +
Preference number: 4 (lower is better)
Translates to: DLDQCVRMWVQTHTHTTISSAKR*QALSVV
Trigger: CACCACGGACAACGCCTGCCACCTCTTTGCTGAGCT...TATTGTCGTGTGGGTGTGTGTCTGCACCCACATCCTCACACATTGATCTAGATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TTGGGTTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTCTCCTCCATATGGCAGAGGCCGGCTaGTTGGGGTCAAGCTCAGCA +
Preference number: 4 (lower is better)
Translates to: LGFCSFHLPRGIQVLLLHMAEAG*LGSSSA
Trigger: TGCTGAGCTTGACCCCAACCAGCCGGCCTCTGCCAT...ATGGAGGAGAAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAACCCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TCTCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGAGGGTTCATCTCTTTTaGCCGGCATTCAGCATGACC +
Preference number: 4 (lower is better)
Translates to: SLLRNWPKVLLLGSRVVRRVHLF*PAFSMT
Trigger: GGTCATGCTGAATGCCGGCCAAAAGAGATGAACCCT...CCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTCTCCTCCATCTTTCCCATGGCACTGGCCCTaGGCAAGGGGCAGGGTTCAT +
Preference number: 4 (lower is better)
Translates to: FLQFPSTQGNPSSSPPSFPWHWP*ARGRVH
Trigger: ATGAACCCTGCCCCTTGCCCAGGGCCAGTGCCATGG...GAAAGATGGAGGAGAAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp CTTCCCTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCTTCTGGGTTCAAGAGTaGTCAGGATTCATGGGTCCC +
Preference number: 4 (lower is better)
Translates to: LPSPHVALSSLLRNWPKVFWVQE*SGFMGP
Trigger: GGGACCCATGAATCCTGACCACTCTTGAACCCAGAA...GACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGGGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp CCAGAACACCGTGATAGCAGGCTGATCAAACCGCTCACTTCCTCCCTGTTTTCCCCAAAGTCCTCCTTCTaGGTTCAAGAGTGGTCAGGA +
Preference number: 4 (lower is better)
Translates to: PEHRDSRLIKPLTSSLFSPKSSF*VQEWSG
Trigger: TCCTGACCACTCTTGAACCCAGAAGGAGGACTTTGG...GGAAAACAGGGAGGAAGTGAGCGGTTTGATCAGCCTGCTATCACGGTGTTCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp ACCCTCCTTTCCAACTCCCTGAAACAGAACGTCCACACTGACACAGCTCCTTGGTCTCTCCTCCGAAATTaGCCCAAAGTCCTCCTTCTG +
Preference number: 4 (lower is better)
Translates to: TLLSNSLKQNVHTDTAPWSLLRN*PKVLLL
Trigger: CAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGAGA...CCAAGGAGCTGTGTCAGTGTGGACGTTCTGTTTCAGGGAGTTGGAAAGGAGGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TCTCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGTCTCTCCTCCGAAATTaGCCCAAAGTCCTCCTTCTG +
Preference number: 4 (lower is better)
Translates to: SLLRNWPKVLLLGSRVVRSLLRN*PKVLLL
Trigger: CAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGAGA...CCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp ATGTCCCACGGTGGCTCTGTTTGGTTTGACAACCTACCCCACAGGTGGCCAGAAGGTGTTAGGTGGACCTaGTTAGTTTTGGAGGCTTTG +
Preference number: 4 (lower is better)
Translates to: MSHGGSVWFDNLPHRWPEGVRWT*LVLEAL
Trigger: CAAAGCCTCCAAAACTAACCAGGTCCACCTAACACC...TTCTGGCCACCTGTGGGGTAGGTTGTCAAACCAAACAGAGCCACCGTGGGACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATGGAGGGGGTGTTAGGTaGACCTGGTTAGTTTTGGAG +
Preference number: 4 (lower is better)
Translates to: SPPKLAQSPPSGFKSGQDGGGVR*TWLVLE
Trigger: CTCCAAAACTAACCAGGTCCACCTAACACCCCCTCC...ATCCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp AATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCATGGGTCCGGAGGGGGTGTTAGGTaGACCTGGTTAGTTTTGGAG +
Preference number: 4 (lower is better)
Translates to: NWPKVLLLGSRVVRIHGSGGGVR*TWLVLE
Trigger: CTCCAAAACTAACCAGGTCCACCTAACACCCCCTCC...GGACCCATGAATCCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp GCAATTCACTTCCCTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCCTGTCACCCATAGCTTaGTTGTTTGTCCCTCCCCTG +
Preference number: 4 (lower is better)
Translates to: AIHFPLPTLHFLLSSEIGLSPIA*LFVPPL
Trigger: CAGGGGAGGGACAAACAACCAAGCTATGGGTGACAG...GCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGGGAAGTGAATTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp ATGTCCAGGATAAGGAGCATACACCAGGATTTATACACGGTGGCAGCGGCTATACACAAGGTTTCACTCTaGGAAGCAGGGGGTGGCCAG +
Preference number: 4 (lower is better)
Translates to: MSRIRSIHQDLYTVAAAIHKVSL*EAGGGQ
Trigger: CTGGCCACCCCCTGCTTCCCAGAGTGAAACCTTGTG...TATAGCCGCTGCCACCGTGTATAAATCCTGGTGTATGCTCCTTATCCTGGACAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp CCATTCTGGCTTAGAGTCCTTAAATGGTGGTCAGGTGTTTTCCCAACTGTCCAGCACAAGGTTTCACTCTaGGAAGCAGGGGGTGGCCAG +
Preference number: 4 (lower is better)
Translates to: PFWLRVLKWWSGVFPTVQHKVSL*EAGGGQ
Trigger: CTGGCCACCCCCTGCTTCCCAGAGTGAAACCTTGTG...CTGGACAGTTGGGAAAACACCTGACCACCATTTAAGGACTCTAAGCCAGAATGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp CCTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCCTCCACTTTGGAGGGACTTTaGTCACCAGGCACAAGGTTT +
Preference number: 4 (lower is better)
Translates to: PLPTLHFLLSSEIGPKSSTLEGL*SPGTRF
Trigger: AAACCTTGTGCCTGGTGACCAAAGTCCCTCCAAAGT...GGAGGACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TCTAGATCAATGTGTGAGGATGTGGGTGCAGACACACACCCACACGACAATATAGCCATGCATGCAAGGTaGGCTGTGGTGGGTGGTGAG +
Preference number: 4 (lower is better)
Translates to: SRSMCEDVGADTHPHDNIAMHAR*AVVGGE
Trigger: CTCACCACCCACCACAGCCCACCTTGCATGCATGGC...TATATTGTCGTGTGGGTGTGTGTCTGCACCCACATCCTCACACATTGATCTAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp CCCAGCTTGATTTCCCCTTGCAAAGCAGTTGAGTTAGGGAGACAGAGCTTTTCCCTTCCGCAGGGATGCTaGGAGGGAGTTACCAGCTTT +
Preference number: 4 (lower is better)
Translates to: PSLISPCKAVELGRQSFSLPQGC*EGVTSF
Trigger: AAAGCTGGTAACTCCCTCCCAGCATCCCTGCGGAAG...GGAAAAGCTCTGTCTCCCTAACTCAACTGCTTTGCAAGGGGAAATCAAGCTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TTGATTTCCCCTTGCAAAGCAGTTGAGTTAGGGAGACAGAGCTTTTCCATTCCCGGCCACTGTGGGGACTaGGGAACCCTTCCCCATCAT +
Preference number: 4 (lower is better)
Translates to: LISPCKAVELGRQSFSIPGHCGD*GTLPHH
Trigger: ATGATGGGGAAGGGTTCCCCAGTCCCCACAGTGGCC...GGGAATGGAAAAGCTCTGTCTCCCTAACTCAACTGCTTTGCAAGGGGAAATCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TCTAGATCAATGTGTGAGGATGTGGGTGCAGACACACACCCACACGACAATATACAGCTGGACAGCTGGTaGCAGCACGGGACTGAACCT +
Preference number: 4 (lower is better)
Translates to: SRSMCEDVGADTHPHDNIQLDSW*QHGTEP
Trigger: AGGTTCAGTCCCGTGCTGCCACCAGCTGTCCAGCTG...TATATTGTCGTGTGGGTGTGTGTCTGCACCCACATCCTCACACATTGATCTAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp AGATCTAGATCAATGTGTGAGGATGTGGGTGCAGACACACACCCACACGACAATGGTGGGGAAGGATGCTaGGTGATCTTGTTTCCCCCG +
Preference number: 4 (lower is better)
Translates to: RSRSMCEDVGADTHPHDNGGEGC*VILFPP
Trigger: CGGGGGAAACAAGATCACCCAGCATCCTTCCCCACC...ATTGTCGTGTGGGTGTGTGTCTGCACCCACATCCTCACACATTGATCTAGATCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp GATCTAGATCAATGTGTGAGGATGTGGGTGCAGACACACACCCACACGACAATAATAGCTCCGGGGCTCTaGCTGGATCCGTCTTCTGGT +
Preference number: 4 (lower is better)
Translates to: DLDQCVRMWVQTHTHTTIIAPGL*LDPSSG
Trigger: ACCAGAAGACGGATCCAGCCAGAGCCCCGGAGCTAT...TATTGTCGTGTGGGTGTGTGTCTGCACCCACATCCTCACACATTGATCTAGATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611415.4
CDS-3UTR CCA 90 bp TTGATTTCCCCTTGCAAAGCAGTTGAGTTAGGGAGACAGAGCTTTTCCATTCCCAGGGGGCAGCCACCTTaGCCTGGCATTTCCGATGAC +
Preference number: 4 (lower is better)
Translates to: LISPCKAVELGRQSFSIPRGQPP*PGISDD
Trigger: GTCATCGGAAATGCCAGGCCAAGGTGGCTGCCCCCT...GGGAATGGAAAAGCTCTGTCTCCCTAACTCAACTGCTTTGCAAGGGGAAATCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp CTTCCCTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCAGAACAACGACATTGTaGGGGTCTGCATTGAGCCAT +
Preference number: 4 (lower is better)
Translates to: LPSPHVALSSLLRNWPKVRTTTL*GSALSH
Trigger: ATGGCTCAATGCAGACCCTCACAATGTCGTTGTTCT...GACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGGGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp AGATCTAGATCAATGTGTGAGGATGTGGGTGCAGACACACACCCACACGACAATGCATGTAAGCCGCGATaGCAACTCCTATCCTGCCTC +
Preference number: 4 (lower is better)
Translates to: RSRSMCEDVGADTHPHDNACKPR*QLLSCL
Trigger: GAGGCAGGATAGGAGTTGTCATCGCGGCTTACATGC...ATTGTCGTGTGGGTGTGTGTCTGCACCCACATCCTCACACATTGATCTAGATCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp GATCTAGATCAATGTGTGAGGATGTGGGTGCAGACACACACCCACACGACAATACGGAGAGCAGGCCACTaGAGTAATGCACGTACCTTC +
Preference number: 4 (lower is better)
Translates to: DLDQCVRMWVQTHTHTTIRRAGH*SNARTF
Trigger: GAAGGTACGTGCATTACTTCAGTGGCCTGCTCTCCG...TATTGTCGTGTGGGTGTGTGTCTGCACCCACATCCTCACACATTGATCTAGATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp TTGATTTCCCCTTGCAAAGCAGTTGAGTTAGGGAGACAGAGCTTTTCCATTCCCCTAACGCCCCACCATTaGCATGAACCTGGGCTGGGA +
Preference number: 4 (lower is better)
Translates to: LISPCKAVELGRQSFSIPLTPHH*HEPGLG
Trigger: TCCCAGCCCAGGTTCATGTCAATGGTGGGGCGTTAG...GGGAATGGAAAAGCTCTGTCTCCCTAACTCAACTGCTTTGCAAGGGGAAATCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp ACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTATGCTGCCCGCACTGTaGCCATCCTGGTTTGGCAAT +
Preference number: 4 (lower is better)
Translates to: TFFSPPKLAQSPPSGFKSMLPAL*PSWFGN
Trigger: ATTGCCAAACCAGGATGGTCACAGTGCGGGCAGCAT...ACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp TCTAGATCAATGTGTGAGGATGTGGGTGCAGACACACACCCACACGACAATATACCTCACTGGTGTTGGTaGCCCCGTCCAGAGAAGAGA +
Preference number: 4 (lower is better)
Translates to: SRSMCEDVGADTHPHDNIPHWCW*PRPEKR
Trigger: TCTCTTCTCTGGACGGGGTCACCAACACCAGTGAGG...TATATTGTCGTGTGGGTGTGTGTCTGCACCCACATCCTCACACATTGATCTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp TTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTCTCCTCCATCTTTCGTCAGTGGATGGGACTaGCGGGAGGATCCAGAGAGG +
Preference number: 4 (lower is better)
Translates to: FLQFPSTQGNPSSSPPSFVSGWD*REDPER
Trigger: CCTCTCTGGATCCTCCCGTCAGTCCCATCCACTGAC...GAAAGATGGAGGAGAAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp TTGGGTTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTCTCCTCCATATGTCCGCTGGGTTGTaGGGTTTCAGGCCCAGAGCA +
Preference number: 4 (lower is better)
Translates to: LGFCSFHLPRGIQVLLLHMSAGL*GFRPRA
Trigger: TGCTCTGGGCCTGAAACCTCACAACCCAGCGGACAT...ATGGAGGAGAAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAACCCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp AGGTGCCTTGGGTCTGAGATACTTTCAAGCAAACAAGTTCTTCCACTTGATGTCAAGTGCTGTCAGCACTaGGGATGGGGCTGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: RCLGSEILSSKQVLPLDVKCCQH*GWGCWW
Trigger: CCACCAGCAGCCCCATCCTCAGTGCTGACAGCACTT...GACATCAAGTGGAAGAACTTGTTTGCTTGAAAGTATCTCAGACCCAAGGCACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp TTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTCTCCTCCATCTTTCAAGTGCTGTCAGCACTaGGGATGGGGCTGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: FLQFPSTQGNPSSSPPSFKCCQH*GWGCWW
Trigger: CCACCAGCAGCCCCATCCTCAGTGCTGACAGCACTT...GAAAGATGGAGGAGAAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp CCCAGCTTGATTTCCCCTTGCAAAGCAGTTGAGTTAGGGAGACAGAGCTTTTCCGCTGAAATGCTGAAGTaGGTAGTCGGGGCTGCTGTA +
Preference number: 4 (lower is better)
Translates to: PSLISPCKAVELGRQSFSAEMLK*VVGAAV
Trigger: TACAGCAGCCCCGACTACTCACTTCAGCATTTCAGC...GGAAAAGCTCTGTCTCCCTAACTCAACTGCTTTGCAAGGGGAAATCAAGCTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp AGGTGCCTTGGGTCTGAGATACTTTCAAGCAAACAAGTTCTTCCACTTGATGTCCCAGCCACACTGAACTaGGCTCGAGCCTGGCTTTCC +
Preference number: 4 (lower is better)
Translates to: RCLGSEILSSKQVLPLDVPATLN*ARAWLS
Trigger: GGAAAGCCAGGCTCGAGCTCAGTTCAGTGTGGCTGG...GACATCAAGTGGAAGAACTTGTTTGCTTGAAAGTATCTCAGACCCAAGGCACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp GATCTAGATCAATGTGTGAGGATGTGGGTGCAGACACACACCCACACGACAATAGGACCCATCATCTGGTaGTGGCTCAAACTGGGACTG +
Preference number: 4 (lower is better)
Translates to: DLDQCVRMWVQTHTHTTIGPIIW*WLKLGL
Trigger: CAGTCCCAGTTTGAGCCATCACCAGATGATGGGTCC...TATTGTCGTGTGGGTGTGTGTCTGCACCCACATCCTCACACATTGATCTAGATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp CCCAGCTTGATTTCCCCTTGCAAAGCAGTTGAGTTAGGGAGACAGAGCTTTTCCGCTATTGCATTGCTATaGAGACCGGAGGCCAGGTTG +
Preference number: 4 (lower is better)
Translates to: PSLISPCKAVELGRQSFSAIALL*RPEARL
Trigger: CAACCTGGCCTCCGGTCTTCATAGCAATGCAATAGC...GGAAAAGCTCTGTCTCCCTAACTCAACTGCTTTGCAAGGGGAAATCAAGCTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp TTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTCTCCTCCATCTTTCTGCCCGGTCTCCCACTaGCATCCTTCGCTTCTCTGG +
Preference number: 4 (lower is better)
Translates to: FLQFPSTQGNPSSSPPSFCPVSH*HPSLLW
Trigger: CCAGAGAAGCGAAGGATGTCAGTGGGAGACCGGGCA...GAAAGATGGAGGAGAAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp TCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATAAGACACCTTCCCATTaGTGGTGGCATAGTTGGGGA +
Preference number: 4 (lower is better)
Translates to: SPPKLAQSPPSGFKSGQDKTPSH*WWHSWG
Trigger: TCCCCAACTATGCCACCATCAATGGGAAGGTGTCTT...ATCCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp AATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCATGGGTCCAAGACACCTTCCCATTaGTGGTGGCATAGTTGGGGA +
Preference number: 4 (lower is better)
Translates to: NWPKVLLLGSRVVRIHGSKTPSH*WWHSWG
Trigger: TCCCCAACTATGCCACCATCAATGGGAAGGTGTCTT...GGACCCATGAATCCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp TTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTCTCCTCCATCTTTCGCGCCTCGGAAGGAGTaGCTGTCGCGGATGATGAAG +
Preference number: 4 (lower is better)
Translates to: FLQFPSTQGNPSSSPPSFAPRKE*LSRMMK
Trigger: CTTCATCATCCGCGACAGTCACTCCTTCCGAGGCGC...GAAAGATGGAGGAGAAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp TCTCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGTTTTATTCTGCTGCATaGTGGTTGGAGGTGGCGAAG +
Preference number: 4 (lower is better)
Translates to: SLLRNWPKVLLLGSRVVRFYSAA*WLEVAK
Trigger: CTTCGCCACCTCCAACCATCATGCAGCAGAATAAAA...CCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp GTTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTCTCCTCCATCTTTTGGCCTGTGGCCCAGTaGGTGACTCCATGTCCACAG +
Preference number: 4 (lower is better)
Translates to: VFAVSIYPGESKFFSSIFWPVAQ*VTPCPQ
Trigger: CTGTGGACATGGAGTCACTCACTGGGCCACAGGCCA...AAAGATGGAGGAGAAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp ACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTCCTGGGCAGAGACTTTaGAGTGAACGATGGTGGCAG +
Preference number: 4 (lower is better)
Translates to: TFFSPPKLAQSPPSGFKSPGQRL*SERWWQ
Trigger: CTGCCACCATCGTTCACTTCAAAGTCTCTGCCCAGG...ACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp CTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCATGGTTGTCAGTCAGAGTaGTTCCCTGGGCAGAGACTT +
Preference number: 4 (lower is better)
Translates to: LRNWPKVLLLGSRVVRIHGCQSE*FPGQRL
Trigger: AAGTCTCTGCCCAGGGAATCACTCTGACTGACAACC...ATGAATCCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp TTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTCTCCTCCATCTTTCCCTTGGAGACGAAGTTaGCGATGGCAGAGGCCGGCT +
Preference number: 4 (lower is better)
Translates to: FLQFPSTQGNPSSSPPSFPWRRS*RWQRPA
Trigger: AGCCGGCCTCTGCCATCGTCAACTTCGTCTCCAAGG...GAAAGATGGAGGAGAAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp CTTCCCTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCGAGGTGCCTTGGGTCTaGGATACTTTCAAGCAAACA +
Preference number: 4 (lower is better)
Translates to: LPSPHVALSSLLRNWPKVEVPWV*DTFKQT
Trigger: TGTTTGCTTGAAAGTATCTCAGACCCAAGGCACCTC...GACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGGGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp GAAATCTTTGGCAAGAATATACTGCAGTGCGGAGTGTTGTGTGTGCGTAGGTGTGCAGGTAAGCAGGTCTaGGATAAGGCTGGTCCAGGG +
Preference number: 4 (lower is better)
Translates to: EIFGKNILQCGVLCVRRCAGKQV*DKAGPG
Trigger: CCCTGGACCAGCCTTATCTCAGACCTGCTTACCTGC...ACACCTACGCACACACAACACTCCGCACTGCAGTATATTCTTGCCAAAGATTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp GTTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTCTCCTCCATCTTTTGGCCGGAGCCTCACTaGGCAGAAAGTAGGTTCCCC +
Preference number: 4 (lower is better)
Translates to: VFAVSIYPGESKFFSSIFWPEPH*AESRFP
Trigger: GGGGAACCTACTTTCTGCTCAGTGAGGCTCCGGCCA...AAAGATGGAGGAGAAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp AGGTGCCTTGGGTCTGAGATACTTTCAAGCAAACAAGTTCTTCCACTTGATGTCAACCCCTCCCAATGCTaGGCCCCACACAGTCTAGGG +
Preference number: 4 (lower is better)
Translates to: RCLGSEILSSKQVLPLDVNPSQC*APHSLG
Trigger: CCCTAGACTGTGTGGGGCTCAGCATTGGGAGGGGTT...GACATCAAGTGGAAGAACTTGTTTGCTTGAAAGTATCTCAGACCCAAGGCACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp ATGCGCACACACGTCCTGTGTTACCACTGGCCAAGGAAACGCGAGTCTCAGGATCTCTCCAGTGGGAGATaGGATATTTACAAAGGAAGG +
Preference number: 4 (lower is better)
Translates to: MRTHVLCYHWPRKRESQDLSSGR*DIYKGR
Trigger: CCTTCCTTTGTAAATATCTCATCTCCCACTGGAGAG...ATCCTGAGACTCGCGTTTCCTTGGCCAGTGGTAACACAGGACGTGTGTGCGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp TTCCTTCGCAGGTCCCCTCTCCATTGTTTTCTCGCCCAATCCTTCCCTCTTGCTCCCCATCATTCGCCTTaGAAAGTCACACTCTCAGAA +
Preference number: 4 (lower is better)
Translates to: FLRRSPLHCFLAQSFPLAPHHSP*KVTLSE
Trigger: TTCTGAGAGTGTGACTTTTCAAGGCGAATGATGGGG...AGCAAGAGGGAAGGATTGGGCGAGAAAACAATGGAGAGGGGACCTGCGAAGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp CTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCATACCGTGATAGCAGGCTaGTCAAACCGCTCACTTCCT +
Preference number: 4 (lower is better)
Translates to: LRNWPKVLLLGSRVVRIHTVIAG*SNRSLP
Trigger: AGGAAGTGAGCGGTTTGATCAGCCTGCTATCACGGT...ATGAATCCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp AATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCATGGGTCCTACTCACTAACCTCCTaGGAGCCGTTTATAGGGGGA +
Preference number: 4 (lower is better)
Translates to: NWPKVLLLGSRVVRIHGSYSLTS*EPFIGG
Trigger: TCCCCCTATAAACGGCTCTCAGGAGGTTAGTGAGTA...GGACCCATGAATCCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp TGCAGGCACCAGGAGAGAGCCTCTGTCACCCATAGCTTGGTTGTTTGTCCCTCCAGTTCCCTAAAGAAATaGGCAAAACACACGCACACA +
Preference number: 4 (lower is better)
Translates to: CRHQERASVTHSLVVCPSSSLKK*AKHTHT
Trigger: TGTGTGCGTGTGTTTTGCTCATTTCTTTAGGGAACT...GGAGGGACAAACAACCAAGCTATGGGTGACAGAGGCTCTCTCCTGGTGCCTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp CACAGGGCAGAGTCCAGGAGCCAGAACACTTCCTTGGCTTGGAAAAGGAAAAAGGCTGAAAGGGCACCATaGAAGGAAATTCGACAGCCT +
Preference number: 4 (lower is better)
Translates to: HRAESRSQNTSLAWKRKKAERAP*KEIRQP
Trigger: AGGCTGTCGAATTTCCTTTCATGGTGCCCTTTCAGC...CTTTTTCCTTTTCCAAGCCAAGGAAGTGTTCTGGCTCCTGGACTCTGCCCTGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310858.10
CDS-3UTR TCA 90 bp CACAGGGCAGAGTCCAGGAGCCAGAACACTTCCTTGGCTTGGAAAAGGAAAAAGTCTGGCTTGGCAACTTaGCATTTTGGAGGGCCTAAC +
Preference number: 4 (lower is better)
Translates to: HRAESRSQNTSLAWKRKKSGLAT*HFGGPN
Trigger: GTTAGGCCCTCCAAAATGTCAAGTTGCCAAGCCAGA...CTTTTTCCTTTTCCAAGCCAAGGAAGTGTTCTGGCTCCTGGACTCTGCCCTGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000310858.10
CDS-3UTR TCA 90 bp GGACAGGAGCCCCAACATGAAGTTCTCAGTGCAAAGCTTTGGATTCTGGCTTGGACAGGAGCCCCAACATaGAGTTCTCAGTGCAAAGCT +
Preference number: 4 (lower is better)
Translates to: GQEPQHEVLSAKLWILAWTGAPT*SSQCKA
Trigger: AGCTTTGCACTGAGAACTTCATGTTGGGGCTCCTGT...CCAAGCCAGAATCCAAAGCTTTGCACTGAGAACTTCATGTTGGGGCTCCTGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310858.10
CDS-3UTR TCA 90 bp CACAGGGCAGAGTCCAGGAGCCAGAACACTTCCTTGGCTTGGAAAAGGAAAAAGTGCACTTCCCAGAGGTaGACACAGGACCTGAATAGA +
Preference number: 4 (lower is better)
Translates to: HRAESRSQNTSLAWKRKKCTSQR*TQDLNR
Trigger: TCTATTCAGGTCCTGTGTTCACCTCTGGGAAGTGCA...CTTTTTCCTTTTCCAAGCCAAGGAAGTGTTCTGGCTCCTGGACTCTGCCCTGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310858.10
CDS-3UTR GCA 90 bp CCATTCTGGCTTAGAGTCCTTAAATGGTGGTCAGGTGTTTTCCCAACTGTCCAGTCTCCTCATTGGCTGTaGTGGGGAAGGAGACAGCGA +
Preference number: 4 (lower is better)
Translates to: PFWLRVLKWWSGVFPTVQSPHWL*WGRRQR
Trigger: TCGCTGTCTCCTTCCCCAGCACAGCCAATGAGGAGA...CTGGACAGTTGGGAAAACACCTGACCACCATTTAAGGACTCTAAGCCAGAATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp ACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTCCACCTCACGGAGGTTaGTCCGGAAGTTCTCCTCAT +
Preference number: 4 (lower is better)
Translates to: TFFSPPKLAQSPPSGFKSPPHGG*SGSSPH
Trigger: ATGAGGAGAACTTCCGGAGCAACCTCCGTGAGGTGG...ACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp TCTGCAATTCACTTCCCTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATTCCACCTCACGGAGGTTaGTCCGGAAGTTCTCCTCAT +
Preference number: 4 (lower is better)
Translates to: SAIHFPLPTLHFLLSSEIPPHGG*SGSSPH
Trigger: ATGAGGAGAACTTCCGGAGCAACCTCCGTGAGGTGG...AATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGGGAAGTGAATTGCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp TCTGCAATTCACTTCCCTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATTTTGGACTTGAGCATCTaGGCCACCTCACGGAGGTTG +
Preference number: 4 (lower is better)
Translates to: SAIHFPLPTLHFLLSSEILDLSI*ATSRRL
Trigger: CAACCTCCGTGAGGTGGCGCAGATGCTCAAGTCCAA...AATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGGGAAGTGAATTGCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp CCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGCACTGGCAGAAATGTTaGTGTAGTGCATGTAAGCCG +
Preference number: 4 (lower is better)
Translates to: PRCTFFSPPKLAQSPPSGHWQKC*CSACKP
Trigger: CGGCTTACATGCACTACAGCAACATTTCTGCCAGTG...CCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp GACAGGAGCCCCAACATGAAGTTCTCAGTGCAAAGCTTTGGATTCTGGCTTGGCATAGAACCGCTTCATTaGAAACCGGTCCAGAGCCTG +
Preference number: 4 (lower is better)
Translates to: DRSPNMKFSVQSFGFWLGIEPLH*KPVQSL
Trigger: CAGGCTCTGGACCGGTTTGCAATGAAGCGGTTCTAT...GCCAAGCCAGAATCCAAAGCTTTGCACTGAGAACTTCATGTTGGGGCTCCTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310858.10
CDS-3UTR GCA 90 bp AGCCCCAACATGAAGTTCTCAGTGCAAAGCTTTGGATTCTGGCTTGGCAACTTGGCATGGCCTGGTAGATaGGGAGAAATGGCCGACATC +
Preference number: 4 (lower is better)
Translates to: SPNMKFSVQSFGFWLGNLAWPGR*GEMADI
Trigger: GATGTCGGCCATTTCTCCGCATCTACCAGGCCATGC...CAAGTTGCCAAGCCAGAATCCAAAGCTTTGCACTGAGAACTTCATGTTGGGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310858.10
CDS-3UTR GCA 90 bp CCCAGCTTGATTTCCCCTTGCAAAGCAGTTGAGTTAGGGAGACAGAGCTTTTCCGCACAGGTGTGGAACTaGACACGGAAGATGACGTCT +
Preference number: 4 (lower is better)
Translates to: PSLISPCKAVELGRQSFSAQVWN*TRKMTS
Trigger: AGACGTCATCTTCCGTGTGCAGTTCCACACCTGTGC...GGAAAAGCTCTGTCTCCCTAACTCAACTGCTTTGCAAGGGGAAATCAAGCTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp GAACAAATTCGCTCCAGCCTCTGCTTTCTGCTTGGCCGCTCAGCGCCCGGGGATATACAAACTCCACTTTaGCATACTCTGGAAATCGAT +
Preference number: 4 (lower is better)
Translates to: EQIRSSLCFLLGRSAPGDIQTPL*HTLEID
Trigger: ATCGATTTCCAGAGTATGGCAAAGTGGAGTTTGTAT...ATCCCCGGGCGCTGAGCGGCCAAGCAGAAAGCAGAGGCTGGAGCGAATTTGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453356.1
CDS-3UTR GCA 90 bp CGCAGGGATGCTGGGAGGGAGTTACCAGCTTTCTGGCATGAATGGGTCCTCCCGATACAAACTCCACTTTaGCATACTCTGGAAATCGAT +
Preference number: 4 (lower is better)
Translates to: RRDAGRELPAFWHEWVLPIQTPL*HTLEID
Trigger: ATCGATTTCCAGAGTATGGCAAAGTGGAGTTTGTAT...CGGGAGGACCCATTCATGCCAGAAAGCTGGTAACTCCCTCCCAGCATCCCTGCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp GACAGGAGCCCCAACATGAAGTTCTCAGTGCAAAGCTTTGGATTCTGGCTTGGCTCTCCAGGTGCTCCATaGCTTGAATTTTCTCTGGCC +
Preference number: 4 (lower is better)
Translates to: DRSPNMKFSVQSFGFWLGSPGAP*LEFSLA
Trigger: GGCCAGAGAAAATTCAAGGCATGGAGCACCTGGAGA...GCCAAGCCAGAATCCAAAGCTTTGCACTGAGAACTTCATGTTGGGGCTCCTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310858.10
CDS-3UTR GCA 90 bp CAAACATCCCCAGCACAACGACCAATTAGGCTGGCAGCCACTGAAACCTCAGAATCTCCAGGTGCTCCATaGCTTGAATTTTCTCTGGCC +
Preference number: 4 (lower is better)
Translates to: QTSPAQRPIRLAATETSESPGAP*LEFSLA
Trigger: GGCCAGAGAAAATTCAAGGCATGGAGCACCTGGAGA...TTCTGAGGTTTCAGTGGCTGCCAGCCTAATTGGTCGTTGTGCTGGGGATGTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000453356.1
CDS-3UTR GCA 90 bp TTGGAGGCTTTGGGTTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTAGAGTGTGCCCATGCTaGCCGCACTGTGACCATCCT +
Preference number: 4 (lower is better)
Translates to: LEALGFCSFHLPRGIQVLRVCPC*PHCDHP
Trigger: AGGATGGTCACAGTGCGGGCAGCATGGGCACACTCT...AAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAACCCAAAGCCTCCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp TCTAGATCAATGTGTGAGGATGTGGGTGCAGACACACACCCACACGACAATATAAGAGTGTGCCCATGCTaGCCGCACTGTGACCATCCT +
Preference number: 4 (lower is better)
Translates to: SRSMCEDVGADTHPHDNIRVCPC*PHCDHP
Trigger: AGGATGGTCACAGTGCGGGCAGCATGGGCACACTCT...TATATTGTCGTGTGGGTGTGTGTCTGCACCCACATCCTCACACATTGATCTAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp GAAATCTTTGGCAAGAATATACTGCAGTGCGGAGTGTTGTGTGTGCGTAGGTGTTGCTGCTGCTGCTGCTaGTGCCACGAATTCAGTCCC +
Preference number: 4 (lower is better)
Translates to: EIFGKNILQCGVLCVRRCCCCCC*CHEFSP
Trigger: GGGACTGAATTCGTGGCAGCAGCAGCAGCAGCAGCA...ACACCTACGCACACACAACACTCCGCACTGCAGTATATTCTTGCCAAAGATTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp TTGGGTTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTCTCCTCCATGTGAGTAGTCGGGGCTaGTGTAGCTACTGCCCACAG +
Preference number: 4 (lower is better)
Translates to: LGFCSFHLPRGIQVLLLHVSSRG*CSYCPQ
Trigger: CTGTGGGCAGTAGCTACAGCAGCCCCGACTACTCAC...ATGGAGGAGAAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAACCCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp CTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCATTACCATGGAAGCCAGTaGCTGGTGGACCCATCATCT +
Preference number: 4 (lower is better)
Translates to: LRNWPKVLLLGSRVVRIHYHGSQ*LVDPSS
Trigger: AGATGATGGGTCCACCAGGCACTGGCTTCCATGGTA...ATGAATCCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp GTTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTCTCCTCCATCTTTGGGGGCTGGAGACAGTaGTACCATGGAAGCCAGTGC +
Preference number: 4 (lower is better)
Translates to: VFAVSIYPGESKFFSSIFGGWRQ*YHGSQC
Trigger: GCACTGGCTTCCATGGTAGCACTGTCTCCAGCCCCC...AAAGATGGAGGAGAAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp AGGTGCCTTGGGTCTGAGATACTTTCAAGCAAACAAGTTCTTCCACTTGATGTCAACCTGGTAGACCCCTaGTGGGTGCCGACACAGGCT +
Preference number: 4 (lower is better)
Translates to: RCLGSEILSSKQVLPLDVNLVDP*WVPTQA
Trigger: AGCCTGTGTCGGCACCCAGCAGGGGTCTACCAGGTT...GACATCAAGTGGAAGAACTTGTTTGCTTGAAAGTATCTCAGACCCAAGGCACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp CTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCATGGCTGGCTATTGCATTaGTATGAAGACCGGAGGCCA +
Preference number: 4 (lower is better)
Translates to: LRNWPKVLLLGSRVVRIHGWLLH*YEDRRP
Trigger: TGGCCTCCGGTCTTCATAGCAATGCAATAGCCAGCC...ATGAATCCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp AATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCATGGGTCCTCCAGGGCTGGCTATTaGATTGCTATGAAGACCGGA +
Preference number: 4 (lower is better)
Translates to: NWPKVLLLGSRVVRIHGSSRAGY*IAMKTG
Trigger: TCCGGTCTTCATAGCAATGCAATAGCCAGCCCTGGA...GGACCCATGAATCCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp GTTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTCTCCTCCATCTTTAGAAGGAGACGGTGCTaGCCCCACTGGGACTGGACA +
Preference number: 4 (lower is better)
Translates to: VFAVSIYPGESKFFSSIFRRRRC*PHWDWT
Trigger: TGTCCAGTCCCAGTGGGGGCAGCACCGTCTCCTTCT...AAAGATGGAGGAGAAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp TCTCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGGTCTCTATCAGAAAATaGCTGACCAGCTCATGGGTC +
Preference number: 4 (lower is better)
Translates to: SLLRNWPKVLLLGSRVVRVSIRK*LTSSWV
Trigger: GACCCATGAGCTGGTCAGGCATTTTCTGATAGAGAC...CCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp TTGGGTTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTCTCCTCCATAGCTGGCGTGGGGTCTaGAGCCAACGTCTCAGATGT +
Preference number: 4 (lower is better)
Translates to: LGFCSFHLPRGIQVLLLHSWRGV*SQRLRC
Trigger: ACATCTGAGACGTTGGCTGCAGACCCCACGCCAGCT...ATGGAGGAGAAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAACCCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp ACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTTCCCTCTCCCCACGTTaGACTTTCTTCTCTCCTCCG +
Preference number: 4 (lower is better)
Translates to: TFFSPPKLAQSPPSGFKSSLSPR*TFFSPP
Trigger: CGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGGGA...ACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp CCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGCAAAGAGACCTGAGGTaGCTTGGGTCTGAGATACTT +
Preference number: 4 (lower is better)
Translates to: PRCTFFSPPKLAQSPPSGQRDLR*LGSEIL
Trigger: AAGTATCTCAGACCCAAGGCACCTCAGGTCTCTTTG...CCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp GTGAGGAAGGGAAAAGCGACCGTGAAAGCTGACCCCAGACTCAGTCCTGGGCCCAATCTTTGGACAGTATaGATGTGTGTCTACAAACAC +
Preference number: 4 (lower is better)
Translates to: VRKGKATVKADPRLSPGPNLWTV*MCVYKH
Trigger: GTGTTTGTAGACACACATGCATACTGTCCAAAGATT...GGGCCCAGGACTGAGTCTGGGGTCAGCTTTCACGGTCGCTTTTCCCTTCCTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp TCTAGATCAATGTGTGAGGATGTGGGTGCAGACACACACCCACACGACAATATATCACTAGAGTGCAGGTaGAGGCACCAGGAGAGAGCC +
Preference number: 4 (lower is better)
Translates to: SRSMCEDVGADTHPHDNISLECR*RHQERA
Trigger: GGCTCTCTCCTGGTGCCTGCACCTGCACTCTAGTGA...TATATTGTCGTGTGGGTGTGTGTCTGCACCCACATCCTCACACATTGATCTAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp TTGATTTCCCCTTGCAAAGCAGTTGAGTTAGGGAGACAGAGCTTTTCCATTCCCGCTGAGGTCAGAGGGTaGCTGCAAAAGCCAGACCCT +
Preference number: 4 (lower is better)
Translates to: LISPCKAVELGRQSFSIPAEVRG*LQKPDP
Trigger: AGGGTCTGGCTTTTGCAGGCACCCTCTGACCTCAGC...GGGAATGGAAAAGCTCTGTCTCCCTAACTCAACTGCTTTGCAAGGGGAAATCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp TTGGGTTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTCTCCTCCATGCTGAGGTCAGAGGGTaGCTGCAAAAGCCAGACCCT +
Preference number: 4 (lower is better)
Translates to: LGFCSFHLPRGIQVLLLHAEVRG*LQKPDP
Trigger: AGGGTCTGGCTTTTGCAGGCACCCTCTGACCTCAGC...ATGGAGGAGAAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAACCCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp GGGGAAGACACCCCGAGCTCAACAGCTGCCTGTTCTGACAGATCTCTTCCTATGAAGAATATACTGCAGTaGGGAGTGTTGTGTGTGCGT +
Preference number: 4 (lower is better)
Translates to: GEDTPSSTAACSDRSLPMKNILQ*GVLCVR
Trigger: ACGCACACACAACACTCCGCACTGCAGTATATTCTT...CATAGGAAGAGATCTGTCAGAACAGGCAGCTGTTGAGCTCGGGGTGTCTTCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp CCATTCTGGCTTAGAGTCCTTAAATGGTGGTCAGGTGTTTTCCCAACTGTCCAGTCCCTGGCTCTTTGTTaGCCATCTTCTCCCAGACCC +
Preference number: 4 (lower is better)
Translates to: PFWLRVLKWWSGVFPTVQSLALC*PSSPRP
Trigger: GGGTCTGGGAGAAGATGGGCAACAAAGAGCCAGGGA...CTGGACAGTTGGGAAAACACCTGACCACCATTTAAGGACTCTAAGCCAGAATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp AGGTGCCTTGGGTCTGAGATACTTTCAAGCAAACAAGTTCTTCCACTTGATGTCTGGGGTCTGCGTCGCTaGGATGTCCATGACTCCCTG +
Preference number: 4 (lower is better)
Translates to: RCLGSEILSSKQVLPLDVWGLRR*DVHDSL
Trigger: CAGGGAGTCATGGACATCGCAGCGACGCAGACCCCA...GACATCAAGTGGAAGAACTTGTTTGCTTGAAAGTATCTCAGACCCAAGGCACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp GAAATCTTTGGCAAGAATATACTGCAGTGCGGAGTGTTGTGTGTGCGTAGGTGTCTTGTCCAGGAGGGCTaGCCCTCCTGCTTTCACACA +
Preference number: 4 (lower is better)
Translates to: EIFGKNILQCGVLCVRRCLVQEG*PSCFHT
Trigger: TGTGTGAAAGCAGGAGGGGCAGCCCTCCTGGACAAG...ACACCTACGCACACACAACACTCCGCACTGCAGTATATTCTTGCCAAAGATTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp CCATTCTGGCTTAGAGTCCTTAAATGGTGGTCAGGTGTTTTCCCAACTGTCCAGTGGGGTGGGGAAGGATaGTGGGTGATCTTGTTTCCC +
Preference number: 4 (lower is better)
Translates to: PFWLRVLKWWSGVFPTVQWGGEG*WVILFP
Trigger: GGGAAACAAGATCACCCAGCATCCTTCCCCACCCCA...CTGGACAGTTGGGAAAACACCTGACCACCATTTAAGGACTCTAAGCCAGAATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp GACAGGAGCCCCAACATGAAGTTCTCAGTGCAAAGCTTTGGATTCTGGCTTGGCCCAGGCCACCTGAGATaGTTCCAATTGACTGGCTAT +
Preference number: 4 (lower is better)
Translates to: DRSPNMKFSVQSFGFWLGPGHLR*FQLTGY
Trigger: ATAGCCAGTCAATTGGAAGCATCTCAGGTGGCCTGG...GCCAAGCCAGAATCCAAAGCTTTGCACTGAGAACTTCATGTTGGGGCTCCTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310858.10
CDS-3UTR CCA 90 bp CCATTCTGGCTTAGAGTCCTTAAATGGTGGTCAGGTGTTTTCCCAACTGTCCAGATGGGCACCAGCTCATaGTTGGATGGAGGAACGCAG +
Preference number: 4 (lower is better)
Translates to: PFWLRVLKWWSGVFPTVQMGTSS*LDGGTQ
Trigger: CTGCGTTCCTCCATCCAACCATGAGCTGGTGCCCAT...CTGGACAGTTGGGAAAACACCTGACCACCATTTAAGGACTCTAAGCCAGAATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp AGCCCCAACATGAAGTTCTCAGTGCAAAGCTTTGGATTCTGGCTTGGCAACTTGCACAGCTGTCCTCCATaGTCCGGCTCACACTCATGT +
Preference number: 4 (lower is better)
Translates to: SPNMKFSVQSFGFWLGNLHSCPP*SGSHSC
Trigger: ACATGAGTGTGAGCCGGACCATGGAGGACAGCTGTG...CAAGTTGCCAAGCCAGAATCCAAAGCTTTGCACTGAGAACTTCATGTTGGGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310858.10
CDS-3UTR CCA 90 bp GACAGGAGCCCCAACATGAAGTTCTCAGTGCAAAGCTTTGGATTCTGGCTTGGCTCCAGTACCTTGGCATaGAGCTTCGTGATGTCAGGT +
Preference number: 4 (lower is better)
Translates to: DRSPNMKFSVQSFGFWLGSSTLA*SFVMSG
Trigger: ACCTGACATCACGAAGCTCCATGCCAAGGTACTGGA...GCCAAGCCAGAATCCAAAGCTTTGCACTGAGAACTTCATGTTGGGGCTCCTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310858.10
CDS-3UTR CCA 90 bp AATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCATGGGTCCTCCAGTACCTTGGCATaGAGCTTCGTGATGTCAGGT +
Preference number: 4 (lower is better)
Translates to: NWPKVLLLGSRVVRIHGSSSTLA*SFVMSG
Trigger: ACCTGACATCACGAAGCTCCATGCCAAGGTACTGGA...GGACCCATGAATCCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp CCCAGCTTGATTTCCCCTTGCAAAGCAGTTGAGTTAGGGAGACAGAGCTTTTCCGAGCCTGGTCCGCACTaGCAGAAATGTTGCTGTAGT +
Preference number: 4 (lower is better)
Translates to: PSLISPCKAVELGRQSFSEPGPH*QKCCCS
Trigger: ACTACAGCAACATTTCTGCCAGTGCGGACCAGGCTC...GGAAAAGCTCTGTCTCCCTAACTCAACTGCTTTGCAAGGGGAAATCAAGCTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TTGATTTCCCCTTGCAAAGCAGTTGAGTTAGGGAGACAGAGCTTTTCCATTCCCAACCGGTCCAGAGCCTaGTCCGCACTGGCAGAAATG +
Preference number: 4 (lower is better)
Translates to: LISPCKAVELGRQSFSIPNRSRA*SALAEM
Trigger: CATTTCTGCCAGTGCGGACCAGGCTCTGGACCGGTT...GGGAATGGAAAAGCTCTGTCTCCCTAACTCAACTGCTTTGCAAGGGGAAATCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp CACAGGGCAGAGTCCAGGAGCCAGAACACTTCCTTGGCTTGGAAAAGGAAAAAGGGGATGGCTGGCCAATaGGCACAATCTTATCCTCAT +
Preference number: 4 (lower is better)
Translates to: HRAESRSQNTSLAWKRKKGMAGQ*AQSYPH
Trigger: ATGAGGATAAGATTGTGCCCATTGGCCAGCCATCCC...CTTTTTCCTTTTCCAAGCCAAGGAAGTGTTCTGGCTCCTGGACTCTGCCCTGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000310858.10
CDS-3UTR CCA 90 bp TCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATGGGATGGCTGGCCAATaGGCACAATCTTATCCTCAT +
Preference number: 4 (lower is better)
Translates to: SPPKLAQSPPSGFKSGQDGMAGQ*AQSYPH
Trigger: ATGAGGATAAGATTGTGCCCATTGGCCAGCCATCCC...ATCCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp CCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGCTTCTTTGGGATGGCTaGCCAATGGGCACAATCTTA +
Preference number: 4 (lower is better)
Translates to: PRCTFFSPPKLAQSPPSGLLWDG*PMGTIL
Trigger: TAAGATTGTGCCCATTGGCCAGCCATCCCAAAGAAG...CCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp CACAGGGCAGAGTCCAGGAGCCAGAACACTTCCTTGGCTTGGAAAAGGAAAAAGGTACCTTCTTTGGGATaGCTGGCCAATGGGCACAAT +
Preference number: 4 (lower is better)
Translates to: HRAESRSQNTSLAWKRKKVPSLG*LANGHN
Trigger: ATTGTGCCCATTGGCCAGCCATCCCAAAGAAGGTAC...CTTTTTCCTTTTCCAAGCCAAGGAAGTGTTCTGGCTCCTGGACTCTGCCCTGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310858.10
CDS-3UTR CCA 90 bp AATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCATGGGTCCGTACCTTCTTTGGGATaGCTGGCCAATGGGCACAAT +
Preference number: 4 (lower is better)
Translates to: NWPKVLLLGSRVVRIHGSVPSLG*LANGHN
Trigger: ATTGTGCCCATTGGCCAGCCATCCCAAAGAAGGTAC...GGACCCATGAATCCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TCTGCAATTCACTTCCCTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATTTGCACGTACCTTCTTTaGGATGGCTGGCCAATGGGC +
Preference number: 4 (lower is better)
Translates to: SAIHFPLPTLHFLLSSEICTYLL*DGWPMG
Trigger: GCCCATTGGCCAGCCATCCCAAAGAAGGTACGTGCA...AATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGGGAAGTGAATTGCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp ACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTTGCACGTACCTTCTTTaGGATGGCTGGCCAATGGGC +
Preference number: 4 (lower is better)
Translates to: TFFSPPKLAQSPPSGFKSCTYLL*DGWPMG
Trigger: GCCCATTGGCCAGCCATCCCAAAGAAGGTACGTGCA...ACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp CTTCCCTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCGTAGATGCGGAGAAATaGCCGACATCCTCCTTTAGA +
Preference number: 4 (lower is better)
Translates to: LPSPHVALSSLLRNWPKVVDAEK*PTSSFR
Trigger: TCTAAAGGAGGATGTCGGCCATTTCTCCGCATCTAC...GACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGGGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp GGACAGGAGCCCCAACATGAAGTTCTCAGTGCAAAGCTTTGGATTCTGGCTTGGTGTACACAGGTTGCATaGCCTGGTAGATGCGGAGAA +
Preference number: 4 (lower is better)
Translates to: GQEPQHEVLSAKLWILAWCTQVA*PGRCGE
Trigger: TTCTCCGCATCTACCAGGCCATGCAACCTGTGTACA...CCAAGCCAGAATCCAAAGCTTTGCACTGAGAACTTCATGTTGGGGCTCCTGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310858.10
CDS-3UTR CCA 90 bp GCAATTCACTTCCCTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCTGTACACAGGTTGCATaGCCTGGTAGATGCGGAGAA +
Preference number: 4 (lower is better)
Translates to: AIHFPLPTLHFLLSSEIGCTQVA*PGRCGE
Trigger: TTCTCCGCATCTACCAGGCCATGCAACCTGTGTACA...GCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGGGAAGTGAATTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp AATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCATGGGTCCTGTACACAGGTTGCATaGCCTGGTAGATGCGGAGAA +
Preference number: 4 (lower is better)
Translates to: NWPKVLLLGSRVVRIHGSCTQVA*PGRCGE
Trigger: TTCTCCGCATCTACCAGGCCATGCAACCTGTGTACA...GGACCCATGAATCCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp GGACAGGAGCCCCAACATGAAGTTCTCAGTGCAAAGCTTTGGATTCTGGCTTGGAGTCTGGCTGTCTCCTaGGATGTTGTAGATGCCAGA +
Preference number: 4 (lower is better)
Translates to: GQEPQHEVLSAKLWILAWSLAVS*DVVDAR
Trigger: TCTGGCATCTACAACATCCCAGGAGACAGCCAGACT...CCAAGCCAGAATCCAAAGCTTTGCACTGAGAACTTCATGTTGGGGCTCCTGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310858.10
CDS-3UTR CCA 90 bp CTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCATCTTCAAGAGCAGTCCTaGCTCGATGGTGATGCAGAC +
Preference number: 4 (lower is better)
Translates to: LRNWPKVLLLGSRVVRIHLQEQS*LDGDAD
Trigger: GTCTGCATCACCATCGAGCCAGGACTGCTCTTGAAG...ATGAATCCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp ATTAGGCTGGCAGCCACTGAAACCTCAGAACAAATTCGCTCCAGCCTCTGCTTTCTTCAAGAGCAGTCCTaGCTCGATGGTGATGCAGAC +
Preference number: 4 (lower is better)
Translates to: IRLAATETSEQIRSSLCFLQEQS*LDGDAD
Trigger: GTCTGCATCACCATCGAGCCAGGACTGCTCTTGAAG...AAAGCAGAGGCTGGAGCGAATTTGTTCTGAGGTTTCAGTGGCTGCCAGCCTAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453356.1
CDS-3UTR CCA 90 bp CCCAGCTTGATTTCCCCTTGCAAAGCAGTTGAGTTAGGGAGACAGAGCTTTTCCCTTCAAGAGCAGTCCTaGCTCGATGGTGATGCAGAC +
Preference number: 4 (lower is better)
Translates to: PSLISPCKAVELGRQSFSLQEQS*LDGDAD
Trigger: GTCTGCATCACCATCGAGCCAGGACTGCTCTTGAAG...GGAAAAGCTCTGTCTCCCTAACTCAACTGCTTTGCAAGGGGAAATCAAGCTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TTGGAGGCTTTGGGTTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTCCCCCAGGTCATGGATaGCACAGGTGTGGAACTGCA +
Preference number: 4 (lower is better)
Translates to: LEALGFCSFHLPRGIQVLPPGHG*HRCGTA
Trigger: TGCAGTTCCACACCTGTGCCATCCATGACCTGGGGG...AAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAACCCAAAGCCTCCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TTGATTTCCCCTTGCAAAGCAGTTGAGTTAGGGAGACAGAGCTTTTCCATTCCCCCCCCAGGTCATGGATaGCACAGGTGTGGAACTGCA +
Preference number: 4 (lower is better)
Translates to: LISPCKAVELGRQSFSIPPPGHG*HRCGTA
Trigger: TGCAGTTCCACACCTGTGCCATCCATGACCTGGGGG...GGGAATGGAAAAGCTCTGTCTCCCTAACTCAACTGCTTTGCAAGGGGAAATCAA
51% GC, longest homopolymer 8 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TTGGGTTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTCTCCTCCATTCTTGTCGGTCTTGGTaGAGGCTGTGGAGTTGCCCG +
Preference number: 4 (lower is better)
Translates to: LGFCSFHLPRGIQVLLLHSCRSW*RLWSCP
Trigger: CGGGCAACTCCACAGCCTCCACCAAGACCGACAAGA...ATGGAGGAGAAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAACCCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TCTAGATCAATGTGTGAGGATGTGGGTGCAGACACACACCCACACGACAATATAGCTGGGTGTGGTACATaGCGCCTTGCTTCTCTCGCT +
Preference number: 4 (lower is better)
Translates to: SRSMCEDVGADTHPHDNIAGCGT*RLASLA
Trigger: AGCGAGAGAAGCAAGGCGCCATGTACCACACCCAGC...TATATTGTCGTGTGGGTGTGTGTCTGCACCCACATCCTCACACATTGATCTAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TTGGGTTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTCTCCTCCATCTGAGGTGCTGGGTGTaGTACATGGCGCCTTGCTTC +
Preference number: 4 (lower is better)
Translates to: LGFCSFHLPRGIQVLLLHLRCWV*YMAPCF
Trigger: GAAGCAAGGCGCCATGTACCACACCCAGCACCTCAG...ATGGAGGAGAAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAACCCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp AGGTGCCTTGGGTCTGAGATACTTTCAAGCAAACAAGTTCTTCCACTTGATGTCCAGACCGTTGGTCAGTaGGGACAGGGCCTCTGGGTA +
Preference number: 4 (lower is better)
Translates to: RCLGSEILSSKQVLPLDVQTVGQ*GQGLWV
Trigger: TACCCAGAGGCCCTGTCCCCACTGACCAACGGTCTG...GACATCAAGTGGAAGAACTTGTTTGCTTGAAAGTATCTCAGACCCAAGGCACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TTGGGTTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTCTCCTCCATACTTGTCCAGACCGTTaGTCAGTGGGGACAGGGCCT +
Preference number: 4 (lower is better)
Translates to: LGFCSFHLPRGIQVLLLHTCPDR*SVGTGP
Trigger: AGGCCCTGTCCCCACTGACCAACGGTCTGGACAAGT...ATGGAGGAGAAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAACCCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TTGGAGGCTTTGGGTTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTACTTGTCCAGACCGTTaGTCAGTGGGGACAGGGCCT +
Preference number: 4 (lower is better)
Translates to: LEALGFCSFHLPRGIQVLTCPDR*SVGTGP
Trigger: AGGCCCTGTCCCCACTGACCAACGGTCTGGACAAGT...AAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAACCCAAAGCCTCCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TTGGAGGCTTTGGGTTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTGAGGGCTGGGCCTGCTaGCTACAAGACTCTCCAAGT +
Preference number: 4 (lower is better)
Translates to: LEALGFCSFHLPRGIQVLEGWAC*LQDSPS
Trigger: ACTTGGAGAGTCTTGTAGCCAGCAGGCCCAGCCCTC...AAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAACCCAAAGCCTCCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTCTCCTCCATCTTTCCAGGGAGACTGGGGATaGGGGTCTCTGCCAATGGCT +
Preference number: 4 (lower is better)
Translates to: FLQFPSTQGNPSSSPPSFQGDWG*GSLPMA
Trigger: AGCCATTGGCAGAGACCCCCATCCCCAGTCTCCCTG...GAAAGATGGAGGAGAAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp AGGTGCCTTGGGTCTGAGATACTTTCAAGCAAACAAGTTCTTCCACTTGATGTCGGAACTCAGGGAGACTaGGGATGGGGGTCTCTGCCA +
Preference number: 4 (lower is better)
Translates to: RCLGSEILSSKQVLPLDVGTQGD*GWGSLP
Trigger: TGGCAGAGACCCCCATCCCCAGTCTCCCTGAGTTCC...GACATCAAGTGGAAGAACTTGTTTGCTTGAAAGTATCTCAGACCCAAGGCACCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TTGATTTCCCCTTGCAAAGCAGTTGAGTTAGGGAGACAGAGCTTTTCCATTCCCTGTTCAATCTCCTGCTaGGAGGCTGCTCGCGGGAAC +
Preference number: 4 (lower is better)
Translates to: LISPCKAVELGRQSFSIPCSISC*EAARGN
Trigger: GTTCCCGCGAGCAGCCTCCCAGCAGGAGATTGAACA...GGGAATGGAAAAGCTCTGTCTCCCTAACTCAACTGCTTTGCAAGGGGAAATCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp CCCAGCTTGATTTCCCCTTGCAAAGCAGTTGAGTTAGGGAGACAGAGCTTTTCCCCAACGAATGCCCACTaGGGATATAGCCAGATCTGG +
Preference number: 4 (lower is better)
Translates to: PSLISPCKAVELGRQSFSPTNAH*GYSQIW
Trigger: CCAGATCTGGCTATATCCCCAGTGGGCATTCGTTGG...GGAAAAGCTCTGTCTCCCTAACTCAACTGCTTTGCAAGGGGAAATCAAGCTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp GGGCGATGCCATTGCAGACCCTCCCACTCCTGCTGGGGTCTTTGTAGAAGAGAATTTGAATGGAAATCCTaGTTAGGCCCAGCCAAACAT +
Preference number: 4 (lower is better)
Translates to: GRCHCRPSHSCWGLCRREFEWKS*LGPAKH
Trigger: ATGTTTGGCTGGGCCTAACCAGGATTTCCATTCAAA...TTCTCTTCTACAAAGACCCCAGCAGGAGTGGGAGGGTCTGCAATGGCATCGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TTGATTTCCCCTTGCAAAGCAGTTGAGTTAGGGAGACAGAGCTTTTCCATTCCCACCCCTGCTACCCTGTaGGCCACCAGCCCTTCTAAA +
Preference number: 4 (lower is better)
Translates to: LISPCKAVELGRQSFSIPTPATL*ATSPSK
Trigger: TTTAGAAGGGCTGGTGGCCCACAGGGTAGCAGGGGT...GGGAATGGAAAAGCTCTGTCTCCCTAACTCAACTGCTTTGCAAGGGGAAATCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp GAAATCTTTGGCAAGAATATACTGCAGTGCGGAGTGTTGTGTGTGCGTAGGTGTACCCCTGCTACCCTGTaGGCCACCAGCCCTTCTAAA +
Preference number: 4 (lower is better)
Translates to: EIFGKNILQCGVLCVRRCTPATL*ATSPSK
Trigger: TTTAGAAGGGCTGGTGGCCCACAGGGTAGCAGGGGT...ACACCTACGCACACACAACACTCCGCACTGCAGTATATTCTTGCCAAAGATTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp ATTTACAAAGGAAGGGGATGGGAAATATCTCCTATCTTGGAAGATAATTGGGGTCCTCCGCAGAGGGGCTaGGGGCTCTGCAGGCTGCTT +
Preference number: 4 (lower is better)
Translates to: IYKGRGWEISPILEDNWGPPQRG*GLCRLL
Trigger: AAGCAGCCTGCAGAGCCCCCAGCCCCTCTGCGGAGG...ACCCCAATTATCTTCCAAGATAGGAGATATTTCCCATCCCCTTCCTTTGTAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp GCAATTCACTTCCCTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCAGGGGATGTGGCTTCTaGAGACTGGTTCTCATACTG +
Preference number: 4 (lower is better)
Translates to: AIHFPLPTLHFLLSSEIGRGCGF*RLVLIL
Trigger: CAGTATGAGAACCAGTCTCCAGAAGCCACATCCCCT...GCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGGGAAGTGAATTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp AGATCTAGATCAATGTGTGAGGATGTGGGTGCAGACACACACCCACACGACAATCAACAGGATGTCCGCTaGGTTGTGAGGTTTCAGGCC +
Preference number: 4 (lower is better)
Translates to: RSRSMCEDVGADTHPHDNQQDVR*VVRFQA
Trigger: GGCCTGAAACCTCACAACCCAGCGGACATCCTGTTG...ATTGTCGTGTGGGTGTGTGTCTGCACCCACATCCTCACACATTGATCTAGATCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TCTGCAATTCACTTCCCTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATTATAGGCCTGGGTGGCTaGAGCACTAAAGCTCTTGGG +
Preference number: 4 (lower is better)
Translates to: SAIHFPLPTLHFLLSSEIIGLGG*STKALG
Trigger: CCCAAGAGCTTTAGTGCTCCAGCCACCCAGGCCTAT...AATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGGGAAGTGAATTGCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TTGATTTCCCCTTGCAAAGCAGTTGAGTTAGGGAGACAGAGCTTTTCCATTCCCTCAAACTGGGACTGCTaGGGGCAGCCATGCTGGGAT +
Preference number: 4 (lower is better)
Translates to: LISPCKAVELGRQSFSIPSNWDC*GQPCWD
Trigger: ATCCCAGCATGGCTGCCCCCAGCAGTCCCAGTTTGA...GGGAATGGAAAAGCTCTGTCTCCCTAACTCAACTGCTTTGCAAGGGGAAATCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp AGGTGCCTTGGGTCTGAGATACTTTCAAGCAAACAAGTTCTTCCACTTGATGTCGGTGATGGCTCAAACTaGGACTGCTGGGGGCAGCCA +
Preference number: 4 (lower is better)
Translates to: RCLGSEILSSKQVLPLDVGDGSN*DCWGQP
Trigger: TGGCTGCCCCCAGCAGTCCCAGTTTGAGCCATCACC...GACATCAAGTGGAAGAACTTGTTTGCTTGAAAGTATCTCAGACCCAAGGCACCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TCTGCAATTCACTTCCCTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATTGAAGCCAGTGCCTGGTaGACCCATCATCTGGTGATG +
Preference number: 4 (lower is better)
Translates to: SAIHFPLPTLHFLLSSEIEASAW*THHLVM
Trigger: CATCACCAGATGATGGGTCCACCAGGCACTGGCTTC...AATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGGGAAGTGAATTGCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp ATGTCCAGGATAAGGAGCATACACCAGGATTTATACACGGTGGCAGCGGCTATAATGGAAGCCAGTGCCTaGTGGACCCATCATCTGGTG +
Preference number: 4 (lower is better)
Translates to: MSRIRSIHQDLYTVAAAIMEASA*WTHHLV
Trigger: CACCAGATGATGGGTCCACCAGGCACTGGCTTCCAT...TATAGCCGCTGCCACCGTGTATAAATCCTGGTGTATGCTCCTTATCCTGGACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp AGGTGCCTTGGGTCTGAGATACTTTCAAGCAAACAAGTTCTTCCACTTGATGTCTGGGACTCCCCGGGGTaGTGGCCACTTTGTTGTGGA +
Preference number: 4 (lower is better)
Translates to: RCLGSEILSSKQVLPLDVWDSPG*WPLCCG
Trigger: TCCACAACAAAGTGGCCACCACCCCGGGGAGTCCCA...GACATCAAGTGGAAGAACTTGTTTGCTTGAAAGTATCTCAGACCCAAGGCACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp GATCTAGATCAATGTGTGAGGATGTGGGTGCAGACACACACCCACACGACAATACATCCTTCGCTTCTCTaGCAAGGCTGGTGTTGGGCT +
Preference number: 4 (lower is better)
Translates to: DLDQCVRMWVQTHTHTTIHPSLL*QGWCWA
Trigger: AGCCCAACACCAGCCTTGCCAGAGAAGCGAAGGATG...TATTGTCGTGTGGGTGTGTGTCTGCACCCACATCCTCACACATTGATCTAGATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp GTTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTCTCCTCCATCTTTGACTGGACATGCCGCTaGCGACAGGCGAAGACACCT +
Preference number: 4 (lower is better)
Translates to: VFAVSIYPGESKFFSSIFDWTCR*RQAKTP
Trigger: AGGTGTCTTCGCCTGTCGCCAGCGGCATGTCCAGTC...AAAGATGGAGGAGAAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TTGGAGGCTTTGGGTTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTAAGTCGGGCAGAGTGTaGGAGAAGGAGACGGTGCTG +
Preference number: 4 (lower is better)
Translates to: LEALGFCSFHLPRGIQVLKSGRV*EKETVL
Trigger: CAGCACCGTCTCCTTCTCCCACACTCTGCCCGACTT...AAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAACCCAAAGCCTCCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp CCCAGCTTGATTTCCCCTTGCAAAGCAGTTGAGTTAGGGAGACAGAGCTTTTCCCTGGCATGGAGTACTTaGAGAAGTCGGGCAGAGTGT +
Preference number: 4 (lower is better)
Translates to: PSLISPCKAVELGRQSFSLAWST*RSRAEC
Trigger: ACACTCTGCCCGACTTCTCCAAGTACTCCATGCCAG...GGAAAAGCTCTGTCTCCCTAACTCAACTGCTTTGCAAGGGGAAATCAAGCTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp ACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTCAGCGATCCGAAGTTTaGCTCATTGGGGCAGCCCTT +
Preference number: 4 (lower is better)
Translates to: TFFSPPKLAQSPPSGFKSQRSEV*LIGAAL
Trigger: AAGGGCTGCCCCAATGAGCCAAACTTCGGATCGCTG...ACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp ACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGCAAGGCAGGGCCAATaGGATGATGGAGTGCTGGTA +
Preference number: 4 (lower is better)
Translates to: TFFSPPKLAQSPPSGFKSARQGQ*DDGVLV
Trigger: TACCAGCACTCCATCATCCCATTGGCCCTGCCTTGC...ACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TCTAGATCAATGTGTGAGGATGTGGGTGCAGACACACACCCACACGACAATATACAGAGGCCGGCTGGTTaGGGTCAAGCTCAGCAAAGA +
Preference number: 4 (lower is better)
Translates to: SRSMCEDVGADTHPHDNIQRPAG*GQAQQR
Trigger: TCTTTGCTGAGCTTGACCCCAACCAGCCGGCCTCTG...TATATTGTCGTGTGGGTGTGTGTCTGCACCCACATCCTCACACATTGATCTAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TTGGGTTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTCTCCTCCATCAGAGGCCGGCTGGTTaGGGTCAAGCTCAGCAAAGA +
Preference number: 4 (lower is better)
Translates to: LGFCSFHLPRGIQVLLLHQRPAG*GQAQQR
Trigger: TCTTTGCTGAGCTTGACCCCAACCAGCCGGCCTCTG...ATGGAGGAGAAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAACCCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATAGGGTTCATCTCTTTTaGCCGGCATTCAGCATGACC +
Preference number: 4 (lower is better)
Translates to: SPPKLAQSPPSGFKSGQDRVHLF*PAFSMT
Trigger: GGTCATGCTGAATGCCGGCCAAAAGAGATGAACCCT...ATCCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp AATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCATGGGTCCTTCTGGGTTCAAGAGTaGTCAGGATTCATGGGTCCC +
Preference number: 4 (lower is better)
Translates to: NWPKVLLLGSRVVRIHGSFWVQE*SGFMGP
Trigger: GGGACCCATGAATCCTGACCACTCTTGAACCCAGAA...GGACCCATGAATCCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTTCTGGGTTCAAGAGTaGTCAGGATTCATGGGTCCC +
Preference number: 4 (lower is better)
Translates to: SPPKLAQSPPSGFKSGQDFWVQE*SGFMGP
Trigger: GGGACCCATGAATCCTGACCACTCTTGAACCCAGAA...ATCCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATCCAAAGTCCTCCTTCTaGGTTCAAGAGTGGTCAGGA +
Preference number: 4 (lower is better)
Translates to: SPPKLAQSPPSGFKSGQDPKSSF*VQEWSG
Trigger: TCCTGACCACTCTTGAACCCAGAAGGAGGACTTTGG...ATCCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp GCAATTCACTTCCCTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCTCTCTCCTCCGAAATTaGCCCAAAGTCCTCCTTCTG +
Preference number: 4 (lower is better)
Translates to: AIHFPLPTLHFLLSSEIGSLLRN*PKVLLL
Trigger: CAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGAGA...GCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGGGAAGTGAATTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp CTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCATGGAGGGGGTGTTAGGTaGACCTGGTTAGTTTTGGAG +
Preference number: 4 (lower is better)
Translates to: LRNWPKVLLLGSRVVRIHGGGVR*TWLVLE
Trigger: CTCCAAAACTAACCAGGTCCACCTAACACCCCCTCC...ATGAATCCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATAACCTACCCCACAGGTaGCCAGAAAAAGATTCTCCC +
Preference number: 4 (lower is better)
Translates to: SPPKLAQSPPSGFKSGQDNLPHR*PEKDSP
Trigger: GGGAGAATCTTTTTCTGGCCACCTGTGGGGTAGGTT...ATCCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp GCAGACCCTCCCACTCCTGCTGGGGTCTTTGTAGAAGAGAAGGGTCTGGCGGCAACAGATCTCTTCCTATaGATACACATATCTCTACCT +
Preference number: 4 (lower is better)
Translates to: ADPPTPAGVFVEEKGLAATDLFL*IHISLP
Trigger: AGGTAGAGATATGTGTATCCATAGGAAGAGATCTGT...TGCCGCCAGACCCTTCTCTTCTACAAAGACCCCAGCAGGAGTGGGAGGGTCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp CACATGCGCACACACGTCCTGTGTTACCACTGGCCAAGGAAACGCGAGTCTCAGAGAGTCCTTAAATGGTaGTCAGGTGTTTTCCCAACT +
Preference number: 4 (lower is better)
Translates to: HMRTHVLCYHWPRKRESQRVLKW*SGVFPT
Trigger: AGTTGGGAAAACACCTGACCACCATTTAAGGACTCT...CTGAGACTCGCGTTTCCTTGGCCAGTGGTAACACAGGACGTGTGTGCGCATGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp AATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCATGGGTCCGAAGGAAGAGCACTTTaGAGGGACTTTGGTCACCAG +
Preference number: 4 (lower is better)
Translates to: NWPKVLLLGSRVVRIHGSEGRAL*RDFGHQ
Trigger: CTGGTGACCAAAGTCCCTCCAAAGTGCTCTTCCTTC...GGACCCATGAATCCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp GCTATCGCTGAGACTCCACCAATTGGTTGGCCTACAGGCCTCACCTCCCGACTCATCTTGGAAGATAATTaGGGTTTGCTAGGGAATGAG +
Preference number: 4 (lower is better)
Translates to: AIAETPPIGWPTGLTSRLILEDN*GLLGNE
Trigger: CTCATTCCCTAGCAAACCCCAATTATCTTCCAAGAT...GAGTCGGGAGGTGAGGCCTGTAGGCCAACCAATTGGTGGAGTCTCAGCGATAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp CCTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCCTCCTCCTGGGCTCTCCAGTaGGAGATGAGATATTTACAA +
Preference number: 4 (lower is better)
Translates to: PLPTLHFLLSSEIGPKSSSWALQ*EMRYLQ
Trigger: TTGTAAATATCTCATCTCCCACTGGAGAGCCCAGGA...GGAGGACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp AGGTGCCTTGGGTCTGAGATACTTTCAAGCAAACAAGTTCTTCCACTTGATGTCGCCATGCATGCAAGGTaGGCTGTGGTGGGTGGTGAG +
Preference number: 4 (lower is better)
Translates to: RCLGSEILSSKQVLPLDVAMHAR*AVVGGE
Trigger: CTCACCACCCACCACAGCCCACCTTGCATGCATGGC...GACATCAAGTGGAAGAACTTGTTTGCTTGAAAGTATCTCAGACCCAAGGCACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp GTTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTCTCCTCCATCTTTGCCATGCATGCAAGGTaGGCTGTGGTGGGTGGTGAG +
Preference number: 4 (lower is better)
Translates to: VFAVSIYPGESKFFSSIFAMHAR*AVVGGE
Trigger: CTCACCACCCACCACAGCCCACCTTGCATGCATGGC...AAAGATGGAGGAGAAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp ACCCTCCTTTCCAACTCCCTGAAACAGAACGTCCACACTGACACAGCTCCTTGGTGTCCCTTAAGCGCCTaGCTAAATAAGAGAGCCAGA +
Preference number: 4 (lower is better)
Translates to: TLLSNSLKQNVHTDTAPWCPLSA*LNKRAR
Trigger: TCTGGCTCTCTTATTTAGCCAGGCGCTTAAGGGACA...CCAAGGAGCTGTGTCAGTGTGGACGTTCTGTTTCAGGGAGTTGGAAAGGAGGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp GCAATTCACTTCCCTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCGACGCTCAGATGACATaGGTCAAAGGCCTTTCCCAA +
Preference number: 4 (lower is better)
Translates to: AIHFPLPTLHFLLSSEIGDAQMT*VKGLSQ
Trigger: TTGGGAAAGGCCTTTGACCCATGTCATCTGAGCGTC...GCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGGGAAGTGAATTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp GTACAGGAGTGGGGACGCGTCAGTGTACAATACATTCATGTCCAGGATAAGGAGAGGAGGCAGGGGTGGTaGACAAAAGTAGGAGTGAGA +
Preference number: 4 (lower is better)
Translates to: VQEWGRVSVQYIHVQDKERRQGW*TKVGVR
Trigger: TCTCACTCCTACTTTTGTCCACCACCCCTGCCTCCT...CTCCTTATCCTGGACATGAATGTATTGTACACTGACGCGTCCCCACTCCTGTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TCTAGATCAATGTGTGAGGATGTGGGTGCAGACACACACCCACACGACAATATAGTGTGGGGGCAGGATTaGGTGTCTGCCTTGACTCAC +
Preference number: 4 (lower is better)
Translates to: SRSMCEDVGADTHPHDNIVWGQD*VSALTH
Trigger: GTGAGTCAAGGCAGACACCCAATCCTGCCCCCACAC...TATATTGTCGTGTGGGTGTGTGTCTGCACCCACATCCTCACACATTGATCTAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp AGGTGCCTTGGGTCTGAGATACTTTCAAGCAAACAAGTTCTTCCACTTGATGTCCAGGATTCCAGGGCCTaGACCTGGGGTAAAGGGCTG +
Preference number: 4 (lower is better)
Translates to: RCLGSEILSSKQVLPLDVQDSRA*TWGKGL
Trigger: CAGCCCTTTACCCCAGGTCCAGGCCCTGGAATCCTG...GACATCAAGTGGAAGAACTTGTTTGCTTGAAAGTATCTCAGACCCAAGGCACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TCTGCAATTCACTTCCCTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATTACTCCACCAATTGGTTaGCCTACAGGCCTCACCTCC +
Preference number: 4 (lower is better)
Translates to: SAIHFPLPTLHFLLSSEITPPIG*PTGLTS
Trigger: GGAGGTGAGGCCTGTAGGCCAACCAATTGGTGGAGT...AATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGGGAAGTGAATTGCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp GAAATCTTTGGCAAGAATATACTGCAGTGCGGAGTGTTGTGTGTGCGTAGGTGTGGTGGGGAAGGATGCTaGGTGATCTTGTTTCCCCCG +
Preference number: 4 (lower is better)
Translates to: EIFGKNILQCGVLCVRRCGGEGC*VILFPP
Trigger: CGGGGGAAACAAGATCACCCAGCATCCTTCCCCACC...ACACCTACGCACACACAACACTCCGCACTGCAGTATATTCTTGCCAAAGATTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TTGATTTCCCCTTGCAAAGCAGTTGAGTTAGGGAGACAGAGCTTTTCCATTCCCCTCCGGGGCTCTGGCTaGATCCGTCTTCTGGTAACT +
Preference number: 4 (lower is better)
Translates to: LISPCKAVELGRQSFSIPLRGSG*IRLLVT
Trigger: AGTTACCAGAAGACGGATCCAGCCAGAGCCCCGGAG...GGGAATGGAAAAGCTCTGTCTCCCTAACTCAACTGCTTTGCAAGGGGAAATCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000419504.5
ENST00000611415.4
CDS-3UTR CCA 90 bp CAACGACCAATTAGGCTGGCAGCCACTGAAACCTCAGAACAAATTCGCTCCAGCAACGACCAATTAGGCTaGCAGCCACTGAAACCTCAG +
Preference number: 4 (lower is better)
Translates to: QRPIRLAATETSEQIRSSNDQLG*QPLKPQ
Trigger: CTGAGGTTTCAGTGGCTGCCAGCCTAATTGGTCGTT...GCTGGAGCGAATTTGTTCTGAGGTTTCAGTGGCTGCCAGCCTAATTGGTCGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453356.1
CDS-3UTR CCA 90 bp AGGTGCCTTGGGTCTGAGATACTTTCAAGCAAACAAGTTCTTCCACTTGATGTCTCGCTGAAGCCCACCTaGATCTCTGGAGAGGCCCCT +
Preference number: 4 (lower is better)
Translates to: RCLGSEILSSKQVLPLDVSLKPT*ISGEAP
Trigger: AGGGGCCTCTCCAGAGATCCAGGTGGGCTTCAGCGA...GACATCAAGTGGAAGAACTTGTTTGCTTGAAAGTATCTCAGACCCAAGGCACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646520.1
CDS-3UTR TCA 90 bp GAAATCTTTGGCAAGAATATACTGCAGTGCGGAGTGTTGTGTGTGCGTAGGTGTCTCCATGTTTGGACTTaGGCATCTGCGCCACCTCAC +
Preference number: 4 (lower is better)
Translates to: EIFGKNILQCGVLCVRRCLHVWT*ASAPPH
Trigger: GTGAGGTGGCGCAGATGCTCAAGTCCAAACATGGAG...ACACCTACGCACACACAACACTCCGCACTGCAGTATATTCTTGCCAAAGATTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp TTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTCTCCTCCATCTTTCTGGCATGGAGCTTCGTaGTGTCAGGTCTCCGCTCAG +
Preference number: 4 (lower is better)
Translates to: FLQFPSTQGNPSSSPPSFWHGAS*CQVSAQ
Trigger: CTGAGCGGAGACCTGACATCACGAAGCTCCATGCCA...GAAAGATGGAGGAGAAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp GGACAGGAGCCCCAACATGAAGTTCTCAGTGCAAAGCTTTGGATTCTGGCTTGGAGAACAACGACATTGTaGGGGTCTGCATTGAGCCAT +
Preference number: 4 (lower is better)
Translates to: GQEPQHEVLSAKLWILAWRTTTL*GSALSH
Trigger: ATGGCTCAATGCAGACCCTCACAATGTCGTTGTTCT...CCAAGCCAGAATCCAAAGCTTTGCACTGAGAACTTCATGTTGGGGCTCCTGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310858.10
CDS-3UTR TCA 90 bp TCTAGATCAATGTGTGAGGATGTGGGTGCAGACACACACCCACACGACAATATATGGGGATGCCGTGCATaGTCACGTGGTGCAGAAACA +
Preference number: 4 (lower is better)
Translates to: SRSMCEDVGADTHPHDNIWGCRA*SRGAET
Trigger: TGTTTCTGCACCACGTGATCATGCACGGCATCCCCA...TATATTGTCGTGTGGGTGTGTGTCTGCACCCACATCCTCACACATTGATCTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp CACATGCGCACACACGTCCTGTGTTACCACTGGCCAAGGAAACGCGAGTCTCAGGAAATCGATCATCTTTaGAAGCATCATCAAGGTCCT +
Preference number: 4 (lower is better)
Translates to: HMRTHVLCYHWPRKRESQEIDHL*KHHQGP
Trigger: AGGACCTTGATGATGCTTTCAAAGATGATCGATTTC...CTGAGACTCGCGTTTCCTTGGCCAGTGGTAACACAGGACGTGTGTGCGCATGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp CGATGCCATTGCAGACCCTCCCACTCCTGCTGGGGTCTTTGTAGAAGAGAAGGGGAAATCGATCATCTTTaGAAGCATCATCAAGGTCCT +
Preference number: 4 (lower is better)
Translates to: RCHCRPSHSCWGLCRREGEIDHL*KHHQGP
Trigger: AGGACCTTGATGATGCTTTCAAAGATGATCGATTTC...CCCTTCTCTTCTACAAAGACCCCAGCAGGAGTGGGAGGGTCTGCAATGGCATCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp AGGTGCCTTGGGTCTGAGATACTTTCAAGCAAACAAGTTCTTCCACTTGATGTCCTAACGCCCCACCATTaGCATGAACCTGGGCTGGGA +
Preference number: 4 (lower is better)
Translates to: RCLGSEILSSKQVLPLDVLTPHH*HEPGLG
Trigger: TCCCAGCCCAGGTTCATGTCAATGGTGGGGCGTTAG...GACATCAAGTGGAAGAACTTGTTTGCTTGAAAGTATCTCAGACCCAAGGCACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp GTTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTCTCCTCCATCTTTCCTCACTGGTGTTGGTaGCCCCGTCCAGAGAAGAGA +
Preference number: 4 (lower is better)
Translates to: VFAVSIYPGESKFFSSIFPHWCW*PRPEKR
Trigger: TCTCTTCTCTGGACGGGGTCACCAACACCAGTGAGG...AAAGATGGAGGAGAAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp CCCAGCTTGATTTCCCCTTGCAAAGCAGTTGAGTTAGGGAGACAGAGCTTTTCCCTGATAGTCATAAGGTaGGTAAGACCTGCCAGGAGG +
Preference number: 4 (lower is better)
Translates to: PSLISPCKAVELGRQSFSLIVIR*VRPARR
Trigger: CCTCCTGGCAGGTCTTACTCACCTTATGACTATCAG...GGAAAAGCTCTGTCTCCCTAACTCAACTGCTTTGCAAGGGGAAATCAAGCTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp AGGTGCCTTGGGTCTGAGATACTTTCAAGCAAACAAGTTCTTCCACTTGATGTCCGGGAAACTCCCCACTaGAGTGCTGTCAGCACTGAG +
Preference number: 4 (lower is better)
Translates to: RCLGSEILSSKQVLPLDVRETPH*SAVSTE
Trigger: CTCAGTGCTGACAGCACTTCAGTGGGGAGTTTCCCG...GACATCAAGTGGAAGAACTTGTTTGCTTGAAAGTATCTCAGACCCAAGGCACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp AATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCATGGGTCCTTTTATTCTGCTGCATaGTGGTTGGAGGTGGCGAAG +
Preference number: 4 (lower is better)
Translates to: NWPKVLLLGSRVVRIHGSFYSAA*WLEVAK
Trigger: CTTCGCCACCTCCAACCATCATGCAGCAGAATAAAA...GGACCCATGAATCCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp TCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATCTATCAGAAAATGCCTaGCCAGCTCATGGGTCATGT +
Preference number: 4 (lower is better)
Translates to: SPPKLAQSPPSGFKSGQDLSENA*PAHGSC
Trigger: ACATGACCCATGAGCTGGTCAGGCATTTTCTGATAG...ATCCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp TCTGCAATTCACTTCCCTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATTCCATGTCCACAGAGTTaGCGAAGAGCACATTGCAGG +
Preference number: 4 (lower is better)
Translates to: SAIHFPLPTLHFLLSSEIPCPQS*RRAHCR
Trigger: CCTGCAATGTGCTCTTCGTCAACTCTGTGGACATGG...AATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGGGAAGTGAATTGCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp TTGGGTTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTCTCCTCCATCTGTGGCCCAGTGAGTaGCTCCATGTCCACAGAGTT +
Preference number: 4 (lower is better)
Translates to: LGFCSFHLPRGIQVLLLHLWPSE*LHVHRV
Trigger: AACTCTGTGGACATGGAGTCACTCACTGGGCCACAG...ATGGAGGAGAAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAACCCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp TTGGAGGCTTTGGGTTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTCTGTGGCCCAGTGAGTaGCTCCATGTCCACAGAGTT +
Preference number: 4 (lower is better)
Translates to: LEALGFCSFHLPRGIQVLLWPSE*LHVHRV
Trigger: AACTCTGTGGACATGGAGTCACTCACTGGGCCACAG...AAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAACCCAAAGCCTCCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp TTGGAGGCTTTGGGTTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTCCTGGGCAGAGACTTTaGAGTGAACGATGGTGGCAG +
Preference number: 4 (lower is better)
Translates to: LEALGFCSFHLPRGIQVLPGQRL*SERWWQ
Trigger: CTGCCACCATCGTTCACTTCAAAGTCTCTGCCCAGG...AAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAACCCAAAGCCTCCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp GAAATCTTTGGCAAGAATATACTGCAGTGCGGAGTGTTGTGTGTGCGTAGGTGTCCTGGGCAGAGACTTTaGAGTGAACGATGGTGGCAG +
Preference number: 4 (lower is better)
Translates to: EIFGKNILQCGVLCVRRCPGQRL*SERWWQ
Trigger: CTGCCACCATCGTTCACTTCAAAGTCTCTGCCCAGG...ACACCTACGCACACACAACACTCCGCACTGCAGTATATTCTTGCCAAAGATTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp CTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCATGAGGGTAGTGGCGTCTaGAAAAGAGCTTTCTCTGGT +
Preference number: 4 (lower is better)
Translates to: LRNWPKVLLLGSRVVRIHEGSGV*KRAFSG
Trigger: ACCAGAGAAAGCTCTTTTTCAGACGCCACTACCCTC...ATGAATCCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp ACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTTGGCTCTGTTTGGTTTaGCAACCTACCCCACAGGTG +
Preference number: 4 (lower is better)
Translates to: TFFSPPKLAQSPPSGFKSWLCLV*QPTPQV
Trigger: CACCTGTGGGGTAGGTTGTCAAACCAAACAGAGCCA...ACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp CCATTCTGGCTTAGAGTCCTTAAATGGTGGTCAGGTGTTTTCCCAACTGTCCAGTGGCTCTGTTTGGTTTaGCAACCTACCCCACAGGTG +
Preference number: 4 (lower is better)
Translates to: PFWLRVLKWWSGVFPTVQWLCLV*QPTPQV
Trigger: CACCTGTGGGGTAGGTTGTCAAACCAAACAGAGCCA...CTGGACAGTTGGGAAAACACCTGACCACCATTTAAGGACTCTAAGCCAGAATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp GATCTAGATCAATGTGTGAGGATGTGGGTGCAGACACACACCCACACGACAATAACAAGTTCTTCCACTTaGTGTCCCACGGTGGCTCTG +
Preference number: 4 (lower is better)
Translates to: DLDQCVRMWVQTHTHTTITSSST*CPTVAL
Trigger: CAGAGCCACCGTGGGACATCAAGTGGAAGAACTTGT...TATTGTCGTGTGGGTGTGTGTCTGCACCCACATCCTCACACATTGATCTAGATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp TCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATAACAGCTGCCTGTTCTaGCAGATCTCTTCCTATGGA +
Preference number: 4 (lower is better)
Translates to: SPPKLAQSPPSGFKSGQDNSCLF*QISSYG
Trigger: TCCATAGGAAGAGATCTGTCAGAACAGGCAGCTGTT...ATCCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp GGGGAAGACACCCCGAGCTCAACAGCTGCCTGTTCTGACAGATCTCTTCCTATGAGAATGGAGTCCTGGTaGATTTTCCATTCTGGCTTA +
Preference number: 4 (lower is better)
Translates to: GEDTPSSTAACSDRSLPMRMESW*IFHSGL
Trigger: TAAGCCAGAATGGAAAATTCACCAGGACTCCATTCT...CATAGGAAGAGATCTGTCAGAACAGGCAGCTGTTGAGCTCGGGGTGTCTTCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp TCTCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGCTCTCCAGTGGGAGATaGGATATTTACAAAGGAAGG +
Preference number: 4 (lower is better)
Translates to: SLLRNWPKVLLLGSRVVRLSSGR*DIYKGR
Trigger: CCTTCCTTTGTAAATATCTCATCTCCCACTGGAGAG...CCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp ATGCGCACACACGTCCTGTGTTACCACTGGCCAAGGAAACGCGAGTCTCAGGATAGTTCCCTAAAGAAATaGGCAAAACACACGCACACA +
Preference number: 4 (lower is better)
Translates to: MRTHVLCYHWPRKRESQDSSLKK*AKHTHT
Trigger: TGTGTGCGTGTGTTTTGCTCATTTCTTTAGGGAACT...ATCCTGAGACTCGCGTTTCCTTGGCCAGTGGTAACACAGGACGTGTGTGCGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp TTGGAGGCTTTGGGTTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTCCCAGGCGTGGGATATaGACAGAGGTCCTCCAACAT +
Preference number: 4 (lower is better)
Translates to: LEALGFCSFHLPRGIQVLPRRGI*TEVLQH
Trigger: ATGTTGGAGGACCTCTGTTCATATCCCACGCCTGGG...AAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAACCCAAAGCCTCCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp CACAGGGCAGAGTCCAGGAGCCAGAACACTTCCTTGGCTTGGAAAAGGAAAAAGCAATCCTTCCTTTGCTaGAAGGGCACCATGAAAGGA +
Preference number: 4 (lower is better)
Translates to: HRAESRSQNTSLAWKRKKQSFLC*KGTMKG
Trigger: TCCTTTCATGGTGCCCTTTCAGCAAAGGAAGGATTG...CTTTTTCCTTTTCCAAGCCAAGGAAGTGTTCTGGCTCCTGGACTCTGCCCTGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310858.10
CDS-3UTR TCA 90 bp TTGATTTCCCCTTGCAAAGCAGTTGAGTTAGGGAGACAGAGCTTTTCCATTCCCGCCTGGCATTTCCGATaGCAGGAGAAGCTGCAGACT +
Preference number: 4 (lower is better)
Translates to: LISPCKAVELGRQSFSIPAWHFR*QEKLQT
Trigger: AGTCTGCAGCTTCTCCTGTCATCGGAAATGCCAGGC...GGGAATGGAAAAGCTCTGTCTCCCTAACTCAACTGCTTTGCAAGGGGAAATCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp TCTAGATCAATGTGTGAGGATGTGGGTGCAGACACACACCCACACGACAATATATCTCCTCATTGGCTGTaGTGGGGAAGGAGACAGCGA +
Preference number: 4 (lower is better)
Translates to: SRSMCEDVGADTHPHDNISPHWL*WGRRQR
Trigger: TCGCTGTCTCCTTCCCCAGCACAGCCAATGAGGAGA...TATATTGTCGTGTGGGTGTGTGTCTGCACCCACATCCTCACACATTGATCTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp TTGGGTTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTCTCCTCCATCCACCTCACGGAGGTTaGTCCGGAAGTTCTCCTCAT +
Preference number: 4 (lower is better)
Translates to: LGFCSFHLPRGIQVLLLHPPHGG*SGSSPH
Trigger: ATGAGGAGAACTTCCGGAGCAACCTCCGTGAGGTGG...ATGGAGGAGAAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAACCCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp TTGATTTCCCCTTGCAAAGCAGTTGAGTTAGGGAGACAGAGCTTTTCCATTCCCTTGGACTTGAGCATCTaGGCCACCTCACGGAGGTTG +
Preference number: 4 (lower is better)
Translates to: LISPCKAVELGRQSFSIPLDLSI*ATSRRL
Trigger: CAACCTCCGTGAGGTGGCGCAGATGCTCAAGTCCAA...GGGAATGGAAAAGCTCTGTCTCCCTAACTCAACTGCTTTGCAAGGGGAAATCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp ACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTCCATGGCCTTACAGATaGTGCAGATCTTCTCCAGGG +
Preference number: 4 (lower is better)
Translates to: TFFSPPKLAQSPPSGFKSPWPYR*CRSSPG
Trigger: CCCTGGAGAAGATCTGCAGCATCTGTAAGGCCATGG...ACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp GACAGGAGCCCCAACATGAAGTTCTCAGTGCAAAGCTTTGGATTCTGGCTTGGCTGCATGATCACGTGGTaGAGAAACAAGGGCTTGTTG +
Preference number: 4 (lower is better)
Translates to: DRSPNMKFSVQSFGFWLGCMITW*RNKGLL
Trigger: CAACAAGCCCTTGTTTCTGCACCACGTGATCATGCA...GCCAAGCCAGAATCCAAAGCTTTGCACTGAGAACTTCATGTTGGGGCTCCTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310858.10
CDS-3UTR GCA 90 bp TTGGAGGCTTTGGGTTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTGCATGGCCTGGTAGATaGGGAGAAATGGCCGACATC +
Preference number: 4 (lower is better)
Translates to: LEALGFCSFHLPRGIQVLAWPGR*GEMADI
Trigger: GATGTCGGCCATTTCTCCGCATCTACCAGGCCATGC...AAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAACCCAAAGCCTCCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp TTGATTTCCCCTTGCAAAGCAGTTGAGTTAGGGAGACAGAGCTTTTCCATTCCCGCATGGCCTGGTAGATaGGGAGAAATGGCCGACATC +
Preference number: 4 (lower is better)
Translates to: LISPCKAVELGRQSFSIPAWPGR*GEMADI
Trigger: GATGTCGGCCATTTCTCCGCATCTACCAGGCCATGC...GGGAATGGAAAAGCTCTGTCTCCCTAACTCAACTGCTTTGCAAGGGGAAATCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp TCTGCAATTCACTTCCCTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATTAGTTGCCCGAGTCGCTaGTCACAGAAAGCGTGTGTT +
Preference number: 4 (lower is better)
Translates to: SAIHFPLPTLHFLLSSEISCPSR*SQKACV
Trigger: AACACACGCTTTCTGTGAGCAGCGACTCGGGCAACT...AATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGGGAAGTGAATTGCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp AGATCTAGATCAATGTGTGAGGATGTGGGTGCAGACACACACCCACACGACAATAGTTGCCCGAGTCGCTaGTCACAGAAAGCGTGTGTT +
Preference number: 4 (lower is better)
Translates to: RSRSMCEDVGADTHPHDNSCPSR*SQKACV
Trigger: AACACACGCTTTCTGTGAGCAGCGACTCGGGCAACT...ATTGTCGTGTGGGTGTGTGTCTGCACCCACATCCTCACACATTGATCTAGATCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp AGGTGCCTTGGGTCTGAGATACTTTCAAGCAAACAAGTTCTTCCACTTGATGTCTGCTGCTGCTGCTGCTaGTGCCACGAATTCAGTCCC +
Preference number: 4 (lower is better)
Translates to: RCLGSEILSSKQVLPLDVCCCCC*CHEFSP
Trigger: GGGACTGAATTCGTGGCAGCAGCAGCAGCAGCAGCA...GACATCAAGTGGAAGAACTTGTTTGCTTGAAAGTATCTCAGACCCAAGGCACCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp AGATCTAGATCAATGTGTGAGGATGTGGGTGCAGACACACACCCACACGACAATTACCATGGAAGCCAGTaGCTGGTGGACCCATCATCT +
Preference number: 4 (lower is better)
Translates to: RSRSMCEDVGADTHPHDNYHGSQ*LVDPSS
Trigger: AGATGATGGGTCCACCAGGCACTGGCTTCCATGGTA...ATTGTCGTGTGGGTGTGTGTCTGCACCCACATCCTCACACATTGATCTAGATCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp TTGATTTCCCCTTGCAAAGCAGTTGAGTTAGGGAGACAGAGCTTTTCCATTCCCTCCCTCTCCCCACGTTaGACTTTCTTCTCTCCTCCG +
Preference number: 4 (lower is better)
Translates to: LISPCKAVELGRQSFSIPSLSPR*TFFSPP
Trigger: CGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGGGA...GGGAATGGAAAAGCTCTGTCTCCCTAACTCAACTGCTTTGCAAGGGGAAATCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp TCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATGAGGCTTTGGGTTTTTaGAGTTTCCATCTACCCAGG +
Preference number: 4 (lower is better)
Translates to: SPPKLAQSPPSGFKSGQDEALGF*SFHLPR
Trigger: CCTGGGTAGATGGAAACTGCAAAAACCCAAAGCCTC...ATCCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp TCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATCAAAGAGACCTGAGGTaGCTTGGGTCTGAGATACTT +
Preference number: 4 (lower is better)
Translates to: SPPKLAQSPPSGFKSGQDQRDLR*LGSEIL
Trigger: AAGTATCTCAGACCCAAGGCACCTCAGGTCTCTTTG...ATCCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp GCAATTCACTTCCCTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCCAAAGAGACCTGAGGTaGCTTGGGTCTGAGATACTT +
Preference number: 4 (lower is better)
Translates to: AIHFPLPTLHFLLSSEIGQRDLR*LGSEIL
Trigger: AAGTATCTCAGACCCAAGGCACCTCAGGTCTCTTTG...GCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGGGAAGTGAATTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp TTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTCTCCTCCATCTTTCTGTTTGTCCCTCCCCTaGTGCACTGCCACCACCAAC +
Preference number: 4 (lower is better)
Translates to: FLQFPSTQGNPSSSPPSFCLSLP*CTATTN
Trigger: GTTGGTGGTGGCAGTGCAGCAGGGGAGGGACAAACA...GAAAGATGGAGGAGAAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp GATCTAGATCAATGTGTGAGGATGTGGGTGCAGACACACACCCACACGACAATAAGACCCTCCCACTCCTaGTGGGGTCTTTGTAGAAGA +
Preference number: 4 (lower is better)
Translates to: DLDQCVRMWVQTHTHTTIRPSHS*WGLCRR
Trigger: TCTTCTACAAAGACCCCAGCAGGAGTGGGAGGGTCT...TATTGTCGTGTGGGTGTGTGTCTGCACCCACATCCTCACACATTGATCTAGATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp TTGGAGGCTTTGGGTTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTCCAACACAGGGACCCTaGAGAATAGAACAGGGCTGG +
Preference number: 4 (lower is better)
Translates to: LEALGFCSFHLPRGIQVLPTQGP*RIEQGW
Trigger: CCAGCCCTGTTCTATTCTGCAGGGTCCCTGTGTTGG...AAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAACCCAAAGCCTCCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp TTGGGTTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTCTCCTCCATCCAACACAGGGACCCTaGAGAATAGAACAGGGCTGG +
Preference number: 4 (lower is better)
Translates to: LGFCSFHLPRGIQVLLLHPTQGP*RIEQGW
Trigger: CCAGCCCTGTTCTATTCTGCAGGGTCCCTGTGTTGG...ATGGAGGAGAAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAACCCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp GGGGAAGACACCCCGAGCTCAACAGCTGCCTGTTCTGACAGATCTCTTCCTATGTATATATCAGTACAATaGCTCTCTCTAGGGGACTCG +
Preference number: 4 (lower is better)
Translates to: GEDTPSSTAACSDRSLPMYISVQ*LSLGDS
Trigger: CGAGTCCCCTAGAGAGAGGCATTGTACTGATATATA...CATAGGAAGAGATCTGTCAGAACAGGCAGCTGTTGAGCTCGGGGTGTCTTCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp TTGGGTTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTCTCCTCCATCAAGGAGACCCTGGCTaGTTCAAGAACAAAGGCCCC +
Preference number: 4 (lower is better)
Translates to: LGFCSFHLPRGIQVLLLHQGDPG*FKNKGP
Trigger: GGGGCCTTTGTTCTTGAAGCAGCCAGGGTCTCCTTG...ATGGAGGAGAAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAACCCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp ACCCTCCTTTCCAACTCCCTGAAACAGAACGTCCACACTGACACAGCTCCTTGGAAGAATATACTGCAGTaGGGAGTGTTGTGTGTGCGT +
Preference number: 4 (lower is better)
Translates to: TLLSNSLKQNVHTDTAPWKNILQ*GVLCVR
Trigger: ACGCACACACAACACTCCGCACTGCAGTATATTCTT...CCAAGGAGCTGTGTCAGTGTGGACGTTCTGTTTCAGGGAGTTGGAAAGGAGGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp TTCCTTCGCAGGTCCCCTCTCCATTGTTTTCTCGCCCAATCCTTCCCTCTTGCTTTGGCAAGAATATACTaGAGTGCGGAGTGTTGTGTG +
Preference number: 4 (lower is better)
Translates to: FLRRSPLHCFLAQSFPLALARIY*SAECCV
Trigger: CACACAACACTCCGCACTGCAGTATATTCTTGCCAA...AGCAAGAGGGAAGGATTGGGCGAGAAAACAATGGAGAGGGGACCTGCGAAGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp TCTGCAATTCACTTCCCTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATTGCAGGATTGGGTGTCTaGCTTGACTCACAGGATCTC +
Preference number: 4 (lower is better)
Translates to: SAIHFPLPTLHFLLSSEIAGLGV*LDSQDL
Trigger: GAGATCCTGTGAGTCAAGGCAGACACCCAATCCTGC...AATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGGGAAGTGAATTGCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp GGACAGGAGCCCCAACATGAAGTTCTCAGTGCAAAGCTTTGGATTCTGGCTTGGCCTCATCCTTCCTGCTaGAGATTCAGCCAACTCTTT +
Preference number: 4 (lower is better)
Translates to: GQEPQHEVLSAKLWILAWPHPSC*RFSQLF
Trigger: AAAGAGTTGGCTGAATCTGCAGCAGGAAGGATGAGG...CCAAGCCAGAATCCAAAGCTTTGCACTGAGAACTTCATGTTGGGGCTCCTGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310858.10
CDS-3UTR CCA 90 bp TTGGAGGCTTTGGGTTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTATGGGCACCAGCTCATaGTTGGATGGAGGAACGCAG +
Preference number: 4 (lower is better)
Translates to: LEALGFCSFHLPRGIQVLMGTSS*LDGGTQ
Trigger: CTGCGTTCCTCCATCCAACCATGAGCTGGTGCCCAT...AAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAACCCAAAGCCTCCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp ATGTCCCACGGTGGCTCTGTTTGGTTTGACAACCTACCCCACAGGTGGCCAGAAGTCCACTACATTCTTTaGTGCATTCTCAGTGGTGAT +
Preference number: 4 (lower is better)
Translates to: MSHGGSVWFDNLPHRWPEVHYIL*CILSGD
Trigger: ATCACCACTGAGAATGCACCAAAGAATGTAGTGGAC...TTCTGGCCACCTGTGGGGTAGGTTGTCAAACCAAACAGAGCCACCGTGGGACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp AGCCCCAACATGAAGTTCTCAGTGCAAAGCTTTGGATTCTGGCTTGGCAACTTGGGAAGTTCTCCTCATTaGCTGTGCTGGGGAAGGAGA +
Preference number: 4 (lower is better)
Translates to: SPNMKFSVQSFGFWLGNLGSSPH*LCWGRR
Trigger: TCTCCTTCCCCAGCACAGCCAATGAGGAGAACTTCC...CAAGTTGCCAAGCCAGAATCCAAAGCTTTGCACTGAGAACTTCATGTTGGGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310858.10
CDS-3UTR CCA 90 bp GGACAGGAGCCCCAACATGAAGTTCTCAGTGCAAAGCTTTGGATTCTGGCTTGGCTTCTTTGGGATGGCTaGCCAATGGGCACAATCTTA +
Preference number: 4 (lower is better)
Translates to: GQEPQHEVLSAKLWILAWLLWDG*PMGTIL
Trigger: TAAGATTGTGCCCATTGGCCAGCCATCCCAAAGAAG...CCAAGCCAGAATCCAAAGCTTTGCACTGAGAACTTCATGTTGGGGCTCCTGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310858.10
CDS-3UTR CCA 90 bp CTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCATGTACCTTCTTTGGGATaGCTGGCCAATGGGCACAAT +
Preference number: 4 (lower is better)
Translates to: LRNWPKVLLLGSRVVRIHVPSLG*LANGHN
Trigger: ATTGTGCCCATTGGCCAGCCATCCCAAAGAAGGTAC...ATGAATCCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp GGACAGGAGCCCCAACATGAAGTTCTCAGTGCAAAGCTTTGGATTCTGGCTTGGGTAGATGCGGAGAAATaGCCGACATCCTCCTTTAGA +
Preference number: 4 (lower is better)
Translates to: GQEPQHEVLSAKLWILAWVDAEK*PTSSFR
Trigger: TCTAAAGGAGGATGTCGGCCATTTCTCCGCATCTAC...CCAAGCCAGAATCCAAAGCTTTGCACTGAGAACTTCATGTTGGGGCTCCTGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310858.10
CDS-3UTR CCA 90 bp AATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCATGGGTCCGTAGATGCGGAGAAATaGCCGACATCCTCCTTTAGA +
Preference number: 4 (lower is better)
Translates to: NWPKVLLLGSRVVRIHGSVDAEK*PTSSFR
Trigger: TCTAAAGGAGGATGTCGGCCATTTCTCCGCATCTAC...GGACCCATGAATCCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp CTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCATTGTACACAGGTTGCATaGCCTGGTAGATGCGGAGAA +
Preference number: 4 (lower is better)
Translates to: LRNWPKVLLLGSRVVRIHCTQVA*PGRCGE
Trigger: TTCTCCGCATCTACCAGGCCATGCAACCTGTGTACA...ATGAATCCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp CCCAGCTTGATTTCCCCTTGCAAAGCAGTTGAGTTAGGGAGACAGAGCTTTTCCAGTCTGGCTGTCTCCTaGGATGTTGTAGATGCCAGA +
Preference number: 4 (lower is better)
Translates to: PSLISPCKAVELGRQSFSSLAVS*DVVDAR
Trigger: TCTGGCATCTACAACATCCCAGGAGACAGCCAGACT...GGAAAAGCTCTGTCTCCCTAACTCAACTGCTTTGCAAGGGGAAATCAAGCTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp AGCCCCAACATGAAGTTCTCAGTGCAAAGCTTTGGATTCTGGCTTGGCAACTTGATGCAGACGCTAGTCTaGCTGTCTCCTGGGATGTTG +
Preference number: 4 (lower is better)
Translates to: SPNMKFSVQSFGFWLGNLMQTLV*LSPGML
Trigger: CAACATCCCAGGAGACAGCCAGACTAGCGTCTGCAT...CAAGTTGCCAAGCCAGAATCCAAAGCTTTGCACTGAGAACTTCATGTTGGGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310858.10
CDS-3UTR CCA 90 bp GATCTAGATCAATGTGTGAGGATGTGGGTGCAGACACACACCCACACGACAATACTTCAAGAGCAGTCCTaGCTCGATGGTGATGCAGAC +
Preference number: 4 (lower is better)
Translates to: DLDQCVRMWVQTHTHTTILQEQS*LDGDAD
Trigger: GTCTGCATCACCATCGAGCCAGGACTGCTCTTGAAG...TATTGTCGTGTGGGTGTGTGTCTGCACCCACATCCTCACACATTGATCTAGATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TCTGCAATTCACTTCCCTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATTCTTCAAGAGCAGTCCTaGCTCGATGGTGATGCAGAC +
Preference number: 4 (lower is better)
Translates to: SAIHFPLPTLHFLLSSEILQEQS*LDGDAD
Trigger: GTCTGCATCACCATCGAGCCAGGACTGCTCTTGAAG...AATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGGGAAGTGAATTGCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TTGGGTTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTCTCCTCCATGATGACGTCTCGGGCTaGGCTTCGGAACTTCTTGTG +
Preference number: 4 (lower is better)
Translates to: LGFCSFHLPRGIQVLLLHDDVSG*ASELLV
Trigger: CACAAGAAGTTCCGAAGCCCAGCCCGAGACGTCATC...ATGGAGGAGAAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAACCCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TTGATTTCCCCTTGCAAAGCAGTTGAGTTAGGGAGACAGAGCTTTTCCATTCCCACAACCCCCAGGTCATaGATGGCACAGGTGTGGAAC +
Preference number: 4 (lower is better)
Translates to: LISPCKAVELGRQSFSIPTTPRS*MAQVWN
Trigger: GTTCCACACCTGTGCCATCCATGACCTGGGGGTTGT...GGGAATGGAAAAGCTCTGTCTCCCTAACTCAACTGCTTTGCAAGGGGAAATCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp GTTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTCTCCTCCATCTTTTCTTGTCGGTCTTGGTaGAGGCTGTGGAGTTGCCCG +
Preference number: 4 (lower is better)
Translates to: VFAVSIYPGESKFFSSIFSCRSW*RLWSCP
Trigger: CGGGCAACTCCACAGCCTCCACCAAGACCGACAAGA...AAAGATGGAGGAGAAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp ATTTACAAAGGAAGGGGATGGGAAATATCTCCTATCTTGGAAGATAATTGGGGTGACTCAAGGCAGCAGTaGCACTGGAGGCCCCGGGGA +
Preference number: 4 (lower is better)
Translates to: IYKGRGWEISPILEDNWGDSRQQ*HWRPRG
Trigger: TCCCCGGGGCCTCCAGTGCCACTGCTGCCTTGAGTC...ACCCCAATTATCTTCCAAGATAGGAGATATTTCCCATCCCCTTCCTTTGTAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTCTCCTCCATCTTTCGCTGGGTGTGGTACATaGCGCCTTGCTTCTCTCGCT +
Preference number: 4 (lower is better)
Translates to: FLQFPSTQGNPSSSPPSFAGCGT*RLASLA
Trigger: AGCGAGAGAAGCAAGGCGCCATGTACCACACCCAGC...GAAAGATGGAGGAGAAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp GTTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTCTCCTCCATCTTTCTGAGGTGCTGGGTGTaGTACATGGCGCCTTGCTTC +
Preference number: 4 (lower is better)
Translates to: VFAVSIYPGESKFFSSIFLRCWV*YMAPCF
Trigger: GAAGCAAGGCGCCATGTACCACACCCAGCACCTCAG...AAAGATGGAGGAGAAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATGTGACCATCCTGGTTTaGCAATTCATCGTCCAGGAT +
Preference number: 4 (lower is better)
Translates to: SPPKLAQSPPSGFKSGQDVTILV*QFIVQD
Trigger: ATCCTGGACGATGAATTGCCAAACCAGGATGGTCAC...ATCCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp GTTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTCTCCTCCATCTTTAGCGGAACATACCGCTaGGGTCATGGGCATAGTGGG +
Preference number: 4 (lower is better)
Translates to: VFAVSIYPGESKFFSSIFSGTYR*GHGHSG
Trigger: CCCACTATGCCCATGACCCCAGCGGTATGTTCCGCT...AAAGATGGAGGAGAAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TCTGCAATTCACTTCCCTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATTACAAGACTCTCCAAGTaGGCTCTTTCCTGCTGGCGT +
Preference number: 4 (lower is better)
Translates to: SAIHFPLPTLHFLLSSEITRLSK*ALSCWR
Trigger: ACGCCAGCAGGAAAGAGCCCACTTGGAGAGTCTTGT...AATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGGGAAGTGAATTGCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp ACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTACAAGACTCTCCAAGTaGGCTCTTTCCTGCTGGCGT +
Preference number: 4 (lower is better)
Translates to: TFFSPPKLAQSPPSGFKSTRLSK*ALSCWR
Trigger: ACGCCAGCAGGAAAGAGCCCACTTGGAGAGTCTTGT...ACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp ATGTCCCACGGTGGCTCTGTTTGGTTTGACAACCTACCCCACAGGTGGCCAGAATTTGAATGGAAATCCTaGTTAGGCCCAGCCAAACAT +
Preference number: 4 (lower is better)
Translates to: MSHGGSVWFDNLPHRWPEFEWKS*LGPAKH
Trigger: ATGTTTGGCTGGGCCTAACCAGGATTTCCATTCAAA...TTCTGGCCACCTGTGGGGTAGGTTGTCAAACCAAACAGAGCCACCGTGGGACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp GTACAGGAGTGGGGACGCGTCAGTGTACAATACATTCATGTCCAGGATAAGGAGGCTGGGCTCTTTGAATaGAAATCCTGGTTAGGCCCA +
Preference number: 4 (lower is better)
Translates to: VQEWGRVSVQYIHVQDKEAGLFE*KSWLGP
Trigger: TGGGCCTAACCAGGATTTCCATTCAAAGAGCCCAGC...CTCCTTATCCTGGACATGAATGTATTGTACACTGACGCGTCCCCACTCCTGTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp GTTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTCTCCTCCATCTTTACCCCTGCTACCCTGTaGGCCACCAGCCCTTCTAAA +
Preference number: 4 (lower is better)
Translates to: VFAVSIYPGESKFFSSIFTPATL*ATSPSK
Trigger: TTTAGAAGGGCTGGTGGCCCACAGGGTAGCAGGGGT...AAAGATGGAGGAGAAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp AGGTGCCTTGGGTCTGAGATACTTTCAAGCAAACAAGTTCTTCCACTTGATGTCACCCCTGCTACCCTGTaGGCCACCAGCCCTTCTAAA +
Preference number: 4 (lower is better)
Translates to: RCLGSEILSSKQVLPLDVTPATL*ATSPSK
Trigger: TTTAGAAGGGCTGGTGGCCCACAGGGTAGCAGGGGT...GACATCAAGTGGAAGAACTTGTTTGCTTGAAAGTATCTCAGACCCAAGGCACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp CTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCATAGGGGATGTGGCTTCTaGAGACTGGTTCTCATACTG +
Preference number: 4 (lower is better)
Translates to: LRNWPKVLLLGSRVVRIHRGCGF*RLVLIL
Trigger: CAGTATGAGAACCAGTCTCCAGAAGCCACATCCCCT...ATGAATCCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp GTACAGGAGTGGGGACGCGTCAGTGTACAATACATTCATGTCCAGGATAAGGAGAGGGGATGTGGCTTCTaGAGACTGGTTCTCATACTG +
Preference number: 4 (lower is better)
Translates to: VQEWGRVSVQYIHVQDKERGCGF*RLVLIL
Trigger: CAGTATGAGAACCAGTCTCCAGAAGCCACATCCCCT...CTCCTTATCCTGGACATGAATGTATTGTACACTGACGCGTCCCCACTCCTGTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TTGGGTTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTCTCCTCCATCAACAGGATGTCCGCTaGGTTGTGAGGTTTCAGGCC +
Preference number: 4 (lower is better)
Translates to: LGFCSFHLPRGIQVLLLHQQDVR*VVRFQA
Trigger: GGCCTGAAACCTCACAACCCAGCGGACATCCTGTTG...ATGGAGGAGAAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAACCCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TTGGGTTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTCTCCTCCATATAGGCCTGGGTGGCTaGAGCACTAAAGCTCTTGGG +
Preference number: 4 (lower is better)
Translates to: LGFCSFHLPRGIQVLLLHIGLGG*STKALG
Trigger: CCCAAGAGCTTTAGTGCTCCAGCCACCCAGGCCTAT...ATGGAGGAGAAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAACCCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp AGGTGCCTTGGGTCTGAGATACTTTCAAGCAAACAAGTTCTTCCACTTGATGTCTCAAACTGGGACTGCTaGGGGCAGCCATGCTGGGAT +
Preference number: 4 (lower is better)
Translates to: RCLGSEILSSKQVLPLDVSNWDC*GQPCWD
Trigger: ATCCCAGCATGGCTGCCCCCAGCAGTCCCAGTTTGA...GACATCAAGTGGAAGAACTTGTTTGCTTGAAAGTATCTCAGACCCAAGGCACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp GAAATCTTTGGCAAGAATATACTGCAGTGCGGAGTGTTGTGTGTGCGTAGGTGTGAAGCCAGTGCCTGGTaGACCCATCATCTGGTGATG +
Preference number: 4 (lower is better)
Translates to: EIFGKNILQCGVLCVRRCEASAW*THHLVM
Trigger: CATCACCAGATGATGGGTCCACCAGGCACTGGCTTC...ACACCTACGCACACACAACACTCCGCACTGCAGTATATTCTTGCCAAAGATTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp GTTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTCTCCTCCATCTTTCACTGCTCTGGGGGCTaGAGACAGTGCTACCATGGA +
Preference number: 4 (lower is better)
Translates to: VFAVSIYPGESKFFSSIFHCSGG*RQCYHG
Trigger: TCCATGGTAGCACTGTCTCCAGCCCCCAGAGCAGTG...AAAGATGGAGGAGAAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp CCCAGCTTGATTTCCCCTTGCAAAGCAGTTGAGTTAGGGAGACAGAGCTTTTCCTGGGGCTTCCAGGGCTaGCTATTGCATTGCTATGAA +
Preference number: 4 (lower is better)
Translates to: PSLISPCKAVELGRQSFSWGFQG*LLHCYE
Trigger: TTCATAGCAATGCAATAGCCAGCCCTGGAAGCCCCA...GGAAAAGCTCTGTCTCCCTAACTCAACTGCTTTGCAAGGGGAAATCAAGCTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TTGGGTTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTCTCCTCCATCATCCTTCGCTTCTCTaGCAAGGCTGGTGTTGGGCT +
Preference number: 4 (lower is better)
Translates to: LGFCSFHLPRGIQVLLLHHPSLL*QGWCWA
Trigger: AGCCCAACACCAGCCTTGCCAGAGAAGCGAAGGATG...ATGGAGGAGAAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAACCCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTCTCCTCCATCTTTCAAGTCGGGCAGAGTGTaGGAGAAGGAGACGGTGCTG +
Preference number: 4 (lower is better)
Translates to: FLQFPSTQGNPSSSPPSFKSGRV*EKETVL
Trigger: CAGCACCGTCTCCTTCTCCCACACTCTGCCCGACTT...GAAAGATGGAGGAGAAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp GTTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTCTCCTCCATCTTTAAGTCGGGCAGAGTGTaGGAGAAGGAGACGGTGCTG +
Preference number: 4 (lower is better)
Translates to: VFAVSIYPGESKFFSSIFKSGRV*EKETVL
Trigger: CAGCACCGTCTCCTTCTCCCACACTCTGCCCGACTT...AAAGATGGAGGAGAAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp ATGTCCAGGATAAGGAGCATACACCAGGATTTATACACGGTGGCAGCGGCTATACTGGCATGGAGTACTTaGAGAAGTCGGGCAGAGTGT +
Preference number: 4 (lower is better)
Translates to: MSRIRSIHQDLYTVAAAILAWST*RSRAEC
Trigger: ACACTCTGCCCGACTTCTCCAAGTACTCCATGCCAG...TATAGCCGCTGCCACCGTGTATAAATCCTGGTGTATGCTCCTTATCCTGGACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp GATCTAGATCAATGTGTGAGGATGTGGGTGCAGACACACACCCACACGACAATACTGGCATGGAGTACTTaGAGAAGTCGGGCAGAGTGT +
Preference number: 4 (lower is better)
Translates to: DLDQCVRMWVQTHTHTTILAWST*RSRAEC
Trigger: ACACTCTGCCCGACTTCTCCAAGTACTCCATGCCAG...TATTGTCGTGTGGGTGTGTGTCTGCACCCACATCCTCACACATTGATCTAGATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp CCATTCTGGCTTAGAGTCCTTAAATGGTGGTCAGGTGTTTTCCCAACTGTCCAGCTGCTGCATGATGGTTaGAGGTGGCGAAGACACCTT +
Preference number: 4 (lower is better)
Translates to: PFWLRVLKWWSGVFPTVQLLHDG*RWRRHL
Trigger: AAGGTGTCTTCGCCACCTCCAACCATCATGCAGCAG...CTGGACAGTTGGGAAAACACCTGACCACCATTTAAGGACTCTAAGCCAGAATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp AGATCTAGATCAATGTGTGAGGATGTGGGTGCAGACACACACCCACACGACAATCTGCTGCATGATGGTTaGAGGTGGCGAAGACACCTT +
Preference number: 4 (lower is better)
Translates to: RSRSMCEDVGADTHPHDNLLHDG*RWRRHL
Trigger: AAGGTGTCTTCGCCACCTCCAACCATCATGCAGCAG...ATTGTCGTGTGGGTGTGTGTCTGCACCCACATCCTCACACATTGATCTAGATCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp ACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTCTGCTGCATGATGGTTaGAGGTGGCGAAGACACCTT +
Preference number: 4 (lower is better)
Translates to: TFFSPPKLAQSPPSGFKSLLHDG*RWRRHL
Trigger: AAGGTGTCTTCGCCACCTCCAACCATCATGCAGCAG...ACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TCTAGATCAATGTGTGAGGATGTGGGTGCAGACACACACCCACACGACAATATACAGCGATCCGAAGTTTaGCTCATTGGGGCAGCCCTT +
Preference number: 4 (lower is better)
Translates to: SRSMCEDVGADTHPHDNIQRSEV*LIGAAL
Trigger: AAGGGCTGCCCCAATGAGCCAAACTTCGGATCGCTG...TATATTGTCGTGTGGGTGTGTGTCTGCACCCACATCCTCACACATTGATCTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TTGGAGGCTTTGGGTTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTGCAAGGCAGGGCCAATaGGATGATGGAGTGCTGGTA +
Preference number: 4 (lower is better)
Translates to: LEALGFCSFHLPRGIQVLARQGQ*DDGVLV
Trigger: TACCAGCACTCCATCATCCCATTGGCCCTGCCTTGC...AAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAACCCAAAGCCTCCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TTGGAGGCTTTGGGTTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTGGTCTGCAGTTGAGTTaGCAGGGCCGGAGCTATCTT +
Preference number: 4 (lower is better)
Translates to: LEALGFCSFHLPRGIQVLGLQLS*QGRSYL
Trigger: AAGATAGCTCCGGCCCTGCCAACTCAACTGCAGACC...AAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAACCCAAAGCCTCCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTCTCCTCCATCTTTCCAGAGGCCGGCTGGTTaGGGTCAAGCTCAGCAAAGA +
Preference number: 4 (lower is better)
Translates to: FLQFPSTQGNPSSSPPSFQRPAG*GQAQQR
Trigger: TCTTTGCTGAGCTTGACCCCAACCAGCCGGCCTCTG...GAAAGATGGAGGAGAAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp CTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCATAGGGTTCATCTCTTTTaGCCGGCATTCAGCATGACC +
Preference number: 4 (lower is better)
Translates to: LRNWPKVLLLGSRVVRIHRVHLF*PAFSMT
Trigger: GGTCATGCTGAATGCCGGCCAAAAGAGATGAACCCT...ATGAATCCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTCTCCTCCATCTTTCAGTGGTCAGGATTCATaGGTCCCCTCCCCACAAGCC +
Preference number: 4 (lower is better)
Translates to: FLQFPSTQGNPSSSPPSFSGQDS*VPSPQA
Trigger: GGCTTGTGGGGAGGGGACCCATGAATCCTGACCACT...GAAAGATGGAGGAGAAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp GTTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTCTCCTCCATCTTTAGTGGTCAGGATTCATaGGTCCCCTCCCCACAAGCC +
Preference number: 4 (lower is better)
Translates to: VFAVSIYPGESKFFSSIFSGQDS*VPSPQA
Trigger: GGCTTGTGGGGAGGGGACCCATGAATCCTGACCACT...AAAGATGGAGGAGAAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp ACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTCACGGTGGCTCTGTTTaGTTTGACAACCTACCCCAC +
Preference number: 4 (lower is better)
Translates to: TFFSPPKLAQSPPSGFKSHGGSV*FDNLPH
Trigger: GTGGGGTAGGTTGTCAAACCAAACAGAGCCACCGTG...ACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp AGATCTAGATCAATGTGTGAGGATGTGGGTGCAGACACACACCCACACGACAATCACGGTGGCTCTGTTTaGTTTGACAACCTACCCCAC +
Preference number: 4 (lower is better)
Translates to: RSRSMCEDVGADTHPHDNHGGSV*FDNLPH
Trigger: GTGGGGTAGGTTGTCAAACCAAACAGAGCCACCGTG...ATTGTCGTGTGGGTGTGTGTCTGCACCCACATCCTCACACATTGATCTAGATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp ACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTCTGTCACCCATAGCTTaGTTGTTTGTCCCTCCCCTG +
Preference number: 4 (lower is better)
Translates to: TFFSPPKLAQSPPSGFKSLSPIA*LFVPPL
Trigger: CAGGGGAGGGACAAACAACCAAGCTATGGGTGACAG...ACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp GGGGAAGACACCCCGAGCTCAACAGCTGCCTGTTCTGACAGATCTCTTCCTATGAGAGTCCTTAAATGGTaGTCAGGTGTTTTCCCAACT +
Preference number: 4 (lower is better)
Translates to: GEDTPSSTAACSDRSLPMRVLKW*SGVFPT
Trigger: AGTTGGGAAAACACCTGACCACCATTTAAGGACTCT...CATAGGAAGAGATCTGTCAGAACAGGCAGCTGTTGAGCTCGGGGTGTCTTCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp GGGGAAGACACCCCGAGCTCAACAGCTGCCTGTTCTGACAGATCTCTTCCTATGCTTAGAGTCCTTAAATaGTGGTCAGGTGTTTTCCCA +
Preference number: 4 (lower is better)
Translates to: GEDTPSSTAACSDRSLPMLRVLK*WSGVFP
Trigger: TGGGAAAACACCTGACCACCATTTAAGGACTCTAAG...CATAGGAAGAGATCTGTCAGAACAGGCAGCTGTTGAGCTCGGGGTGTCTTCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp AGGTGCCTTGGGTCTGAGATACTTTCAAGCAAACAAGTTCTTCCACTTGATGTCCCAGGAATAGGCTCCTaGGCTCTCCAGTGGGAGATG +
Preference number: 4 (lower is better)
Translates to: RCLGSEILSSKQVLPLDVPGIGS*ALQWEM
Trigger: CATCTCCCACTGGAGAGCCCAGGAGCCTATTCCTGG...GACATCAAGTGGAAGAACTTGTTTGCTTGAAAGTATCTCAGACCCAAGGCACCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp ATGTCCAGGATAAGGAGCATACACCAGGATTTATACACGGTGGCAGCGGCTATACAGACAGCGCTCTCCTaGCTGACACACAGATTCAAC +
Preference number: 4 (lower is better)
Translates to: MSRIRSIHQDLYTVAAAIQTALS*LTHRFN
Trigger: GTTGAATCTGTGTGTCAGCCAGGAGAGCGCTGTCTG...TATAGCCGCTGCCACCGTGTATAAATCCTGGTGTATGCTCCTTATCCTGGACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp CCCAGCTTGATTTCCCCTTGCAAAGCAGTTGAGTTAGGGAGACAGAGCTTTTCCAGCTTTCAGAGCTACTaGAGGAGACGCTCAGATGAC +
Preference number: 4 (lower is better)
Translates to: PSLISPCKAVELGRQSFSSFQSY*RRRSDD
Trigger: GTCATCTGAGCGTCTCCTCCAGTAGCTCTGAAAGCT...GGAAAAGCTCTGTCTCCCTAACTCAACTGCTTTGCAAGGGGAAATCAAGCTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp ATGTCCAGGATAAGGAGCATACACCAGGATTTATACACGGTGGCAGCGGCTATAGAACCACTTCTCACCTaGGCTATCGCTGAGACTCCA +
Preference number: 4 (lower is better)
Translates to: MSRIRSIHQDLYTVAAAIEPLLT*AIAETP
Trigger: TGGAGTCTCAGCGATAGCCCAGGTGAGAAGTGGTTC...TATAGCCGCTGCCACCGTGTATAAATCCTGGTGTATGCTCCTTATCCTGGACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp GATCTAGATCAATGTGTGAGGATGTGGGTGCAGACACACACCCACACGACAATAGAACCACTTCTCACCTaGGCTATCGCTGAGACTCCA +
Preference number: 4 (lower is better)
Translates to: DLDQCVRMWVQTHTHTTIEPLLT*AIAETP
Trigger: TGGAGTCTCAGCGATAGCCCAGGTGAGAAGTGGTTC...TATTGTCGTGTGGGTGTGTGTCTGCACCCACATCCTCACACATTGATCTAGATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp CCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGGGTCCTCCAACATTTTaGACATTTGAGGACAGAGGT +
Preference number: 4 (lower is better)
Translates to: PRCTFFSPPKLAQSPPSGGPPTF*TFEDRG
Trigger: ACCTCTGTCCTCAAATGTCCAAAATGTTGGAGGACC...CCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTCTCCTCCATCTTTCGGTGGGGAAGGATGCTaGGTGATCTTGTTTCCCCCG +
Preference number: 4 (lower is better)
Translates to: FLQFPSTQGNPSSSPPSFGGEGC*VILFPP
Trigger: CGGGGGAAACAAGATCACCCAGCATCCTTCCCCACC...GAAAGATGGAGGAGAAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp AGGTGCCTTGGGTCTGAGATACTTTCAAGCAAACAAGTTCTTCCACTTGATGTCATAGCTCCGGGGCTCTaGCTGGATCCGTCTTCTGGT +
Preference number: 4 (lower is better)
Translates to: RCLGSEILSSKQVLPLDVIAPGL*LDPSSG
Trigger: ACCAGAAGACGGATCCAGCCAGAGCCCCGGAGCTAT...GACATCAAGTGGAAGAACTTGTTTGCTTGAAAGTATCTCAGACCCAAGGCACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419504.5
ENST00000611415.4
CDS-3UTR TCA 90 bp TTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTCTCCTCCATCTTTCGTGCATTCTCAGTGGTaGTGGGCACCAGCTCATGGT +
Preference number: 4 (lower is better)
Translates to: FLQFPSTQGNPSSSPPSFVHSQW*WAPAHG
Trigger: ACCATGAGCTGGTGCCCATCACCACTGAGAATGCAC...GAAAGATGGAGGAGAAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp TTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTCTCCTCCATCTTTCCGGAGAGCAGGCCACTaGAGTAATGCACGTACCTTC +
Preference number: 4 (lower is better)
Translates to: FLQFPSTQGNPSSSPPSFRRAGH*SNARTF
Trigger: GAAGGTACGTGCATTACTTCAGTGGCCTGCTCTCCG...GAAAGATGGAGGAGAAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp TGGTCAGGTGTTTTCCCAACTGTCCAGTGGACCTTAGGCCCTTTGGCCCAAGTGGAAATCGATCATCTTTaGAAGCATCATCAAGGTCCT +
Preference number: 4 (lower is better)
Translates to: WSGVFPTVQWTLGPLAQVEIDHL*KHHQGP
Trigger: AGGACCTTGATGATGCTTTCAAAGATGATCGATTTC...CACTTGGGCCAAAGGGCCTAAGGTCCACTGGACAGTTGGGAAAACACCTGACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp TTGGGTTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTCTCCTCCATGCTTCCGAAAAGGATTaGGAGCGGAACATACCGCTG +
Preference number: 4 (lower is better)
Translates to: LGFCSFHLPRGIQVLLLHASEKD*ERNIPL
Trigger: CAGCGGTATGTTCCGCTCTCAATCCTTTTCGGAAGC...ATGGAGGAGAAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAACCCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp AATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCATGGGTCCCCAGCATCAGCATATTaGGTGTTTCGATGGACTGTT +
Preference number: 4 (lower is better)
Translates to: NWPKVLLLGSRVVRIHGSPASAY*VFRWTV
Trigger: AACAGTCCATCGAAACACTCAATATGCTGATGCTGG...GGACCCATGAATCCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp GATCTAGATCAATGTGTGAGGATGTGGGTGCAGACACACACCCACACGACAATACTGATAGTCATAAGGTaGGTAAGACCTGCCAGGAGG +
Preference number: 4 (lower is better)
Translates to: DLDQCVRMWVQTHTHTTILIVIR*VRPARR
Trigger: CCTCCTGGCAGGTCTTACTCACCTTATGACTATCAG...TATTGTCGTGTGGGTGTGTGTCTGCACCCACATCCTCACACATTGATCTAGATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp AGGTGCCTTGGGTCTGAGATACTTTCAAGCAAACAAGTTCTTCCACTTGATGTCGGACCCATCATCTGGTaGTGGCTCAAACTGGGACTG +
Preference number: 4 (lower is better)
Translates to: RCLGSEILSSKQVLPLDVGPIIW*WLKLGL
Trigger: CAGTCCCAGTTTGAGCCATCACCAGATGATGGGTCC...GACATCAAGTGGAAGAACTTGTTTGCTTGAAAGTATCTCAGACCCAAGGCACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp GAAATCTTTGGCAAGAATATACTGCAGTGCGGAGTGTTGTGTGTGCGTAGGTGTGCTATTGCATTGCTATaGAGACCGGAGGCCAGGTTG +
Preference number: 4 (lower is better)
Translates to: EIFGKNILQCGVLCVRRCAIALL*RPEARL
Trigger: CAACCTGGCCTCCGGTCTTCATAGCAATGCAATAGC...ACACCTACGCACACACAACACTCCGCACTGCAGTATATTCTTGCCAAAGATTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp TTGGAGGCTTTGGGTTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTGCTATTGCATTGCTATaGAGACCGGAGGCCAGGTTG +
Preference number: 4 (lower is better)
Translates to: LEALGFCSFHLPRGIQVLAIALL*RPEARL
Trigger: CAACCTGGCCTCCGGTCTTCATAGCAATGCAATAGC...AAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAACCCAAAGCCTCCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp ACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTAAGACACCTTCCCATTaGTGGTGGCATAGTTGGGGA +
Preference number: 4 (lower is better)
Translates to: TFFSPPKLAQSPPSGFKSKTPSH*WWHSWG
Trigger: TCCCCAACTATGCCACCATCAATGGGAAGGTGTCTT...ACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp CTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCATTTTTATTCTGCTGCATaGTGGTTGGAGGTGGCGAAG +
Preference number: 4 (lower is better)
Translates to: LRNWPKVLLLGSRVVRIHFYSAA*WLEVAK
Trigger: CTTCGCCACCTCCAACCATCATGCAGCAGAATAAAA...ATGAATCCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp TTGATTTCCCCTTGCAAAGCAGTTGAGTTAGGGAGACAGAGCTTTTCCATTCCCCCATGTCCACAGAGTTaGCGAAGAGCACATTGCAGG +
Preference number: 4 (lower is better)
Translates to: LISPCKAVELGRQSFSIPPCPQS*RRAHCR
Trigger: CCTGCAATGTGCTCTTCGTCAACTCTGTGGACATGG...GGGAATGGAAAAGCTCTGTCTCCCTAACTCAACTGCTTTGCAAGGGGAAATCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp TTGGAGGCTTTGGGTTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTCCATGTCCACAGAGTTaGCGAAGAGCACATTGCAGG +
Preference number: 4 (lower is better)
Translates to: LEALGFCSFHLPRGIQVLPCPQS*RRAHCR
Trigger: CCTGCAATGTGCTCTTCGTCAACTCTGTGGACATGG...AAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAACCCAAAGCCTCCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp AGGTGCCTTGGGTCTGAGATACTTTCAAGCAAACAAGTTCTTCCACTTGATGTCCTGTGGCCCAGTGAGTaGCTCCATGTCCACAGAGTT +
Preference number: 4 (lower is better)
Translates to: RCLGSEILSSKQVLPLDVLWPSE*LHVHRV
Trigger: AACTCTGTGGACATGGAGTCACTCACTGGGCCACAG...GACATCAAGTGGAAGAACTTGTTTGCTTGAAAGTATCTCAGACCCAAGGCACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp CCATTCTGGCTTAGAGTCCTTAAATGGTGGTCAGGTGTTTTCCCAACTGTCCAGGAGGGTAGTGGCGTCTaGAAAAGAGCTTTCTCTGGT +
Preference number: 4 (lower is better)
Translates to: PFWLRVLKWWSGVFPTVQEGSGV*KRAFSG
Trigger: ACCAGAGAAAGCTCTTTTTCAGACGCCACTACCCTC...CTGGACAGTTGGGAAAACACCTGACCACCATTTAAGGACTCTAAGCCAGAATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp TCTAGATCAATGTGTGAGGATGTGGGTGCAGACACACACCCACACGACAATATAACAAGTTCTTCCACTTaGTGTCCCACGGTGGCTCTG +
Preference number: 4 (lower is better)
Translates to: SRSMCEDVGADTHPHDNITSSST*CPTVAL
Trigger: CAGAGCCACCGTGGGACATCAAGTGGAAGAACTTGT...TATATTGTCGTGTGGGTGTGTGTCTGCACCCACATCCTCACACATTGATCTAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp CCCAGCTTGATTTCCCCTTGCAAAGCAGTTGAGTTAGGGAGACAGAGCTTTTCCGAGGTGCCTTGGGTCTaGGATACTTTCAAGCAAACA +
Preference number: 4 (lower is better)
Translates to: PSLISPCKAVELGRQSFSEVPWV*DTFKQT
Trigger: TGTTTGCTTGAAAGTATCTCAGACCCAAGGCACCTC...GGAAAAGCTCTGTCTCCCTAACTCAACTGCTTTGCAAGGGGAAATCAAGCTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp CCATTCTGGCTTAGAGTCCTTAAATGGTGGTCAGGTGTTTTCCCAACTGTCCAGCAGCGCTCTCCTGGCTaGCACACAGATTCAACAATA +
Preference number: 4 (lower is better)
Translates to: PFWLRVLKWWSGVFPTVQQRSPG*HTDSTI
Trigger: TATTGTTGAATCTGTGTGTCAGCCAGGAGAGCGCTG...CTGGACAGTTGGGAAAACACCTGACCACCATTTAAGGACTCTAAGCCAGAATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp AGGTGCCTTGGGTCTGAGATACTTTCAAGCAAACAAGTTCTTCCACTTGATGTCTCGCTGCGATGTCCATaGCTCCCTGGCTCTTTGTTG +
Preference number: 4 (lower is better)
Translates to: RCLGSEILSSKQVLPLDVSLRCP*LPGSLL
Trigger: CAACAAAGAGCCAGGGAGTCATGGACATCGCAGCGA...GACATCAAGTGGAAGAACTTGTTTGCTTGAAAGTATCTCAGACCCAAGGCACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp GAAATCTTTGGCAAGAATATACTGCAGTGCGGAGTGTTGTGTGTGCGTAGGTGTGAGGAGACGCTCAGATaGCATGGGTCAAAGGCCTTT +
Preference number: 4 (lower is better)
Translates to: EIFGKNILQCGVLCVRRCEETLR*HGSKAF
Trigger: AAAGGCCTTTGACCCATGTCATCTGAGCGTCTCCTC...ACACCTACGCACACACAACACTCCGCACTGCAGTATATTCTTGCCAAAGATTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp AGGTGCCTTGGGTCTGAGATACTTTCAAGCAAACAAGTTCTTCCACTTGATGTCATTGGGTGTCTGCCTTaGCTCACAGGATCTCCCCAG +
Preference number: 4 (lower is better)
Translates to: RCLGSEILSSKQVLPLDVIGCLP*LTGSPQ
Trigger: CTGGGGAGATCCTGTGAGTCAAGGCAGACACCCAAT...GACATCAAGTGGAAGAACTTGTTTGCTTGAAAGTATCTCAGACCCAAGGCACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp TCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATAACATTTTGGACATTTaGGGACAGAGGTGCCAAGAG +
Preference number: 4 (lower is better)
Translates to: SPPKLAQSPPSGFKSGQDNILDI*GQRCQE
Trigger: CTCTTGGCACCTCTGTCCTCAAATGTCCAAAATGTT...ATCCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp AATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCATGGGTCCCACTACATTCTTTGGTaGATTCTCAGTGGTGATGGG +
Preference number: 4 (lower is better)
Translates to: NWPKVLLLGSRVVRIHGSHYILW*ILSGDG
Trigger: CCCATCACCACTGAGAATGCACCAAAGAATGTAGTG...GGACCCATGAATCCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp GTTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTCTCCTCCATCTTTTTGGACTTGAGCATCTaGGCCACCTCACGGAGGTTG +
Preference number: 4 (lower is better)
Translates to: VFAVSIYPGESKFFSSIFLDLSI*ATSRRL
Trigger: CAACCTCCGTGAGGTGGCGCAGATGCTCAAGTCCAA...AAAGATGGAGGAGAAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp TTGATTTCCCCTTGCAAAGCAGTTGAGTTAGGGAGACAGAGCTTTTCCATTCCCTGGCCTTACAGATGCTaGAGATCTTCTCCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: LISPCKAVELGRQSFSIPWPYRC*RSSPGL
Trigger: CAGCCCTGGAGAAGATCTGCAGCATCTGTAAGGCCA...GGGAATGGAAAAGCTCTGTCTCCCTAACTCAACTGCTTTGCAAGGGGAAATCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp TTGGAGGCTTTGGGTTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTTGGCCTTACAGATGCTaGAGATCTTCTCCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: LEALGFCSFHLPRGIQVLWPYRC*RSSPGL
Trigger: CAGCCCTGGAGAAGATCTGCAGCATCTGTAAGGCCA...AAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAACCCAAAGCCTCCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp CCCAGCTTGATTTCCCCTTGCAAAGCAGTTGAGTTAGGGAGACAGAGCTTTTCCCACTGGCAGAAATGTTaGTGTAGTGCATGTAAGCCG +
Preference number: 4 (lower is better)
Translates to: PSLISPCKAVELGRQSFSHWQKC*CSACKP
Trigger: CGGCTTACATGCACTACAGCAACATTTCTGCCAGTG...GGAAAAGCTCTGTCTCCCTAACTCAACTGCTTTGCAAGGGGAAATCAAGCTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp ATGTCCAGGATAAGGAGCATACACCAGGATTTATACACGGTGGCAGCGGCTATAATAGAACCGCTTCATTaGAAACCGGTCCAGAGCCTG +
Preference number: 4 (lower is better)
Translates to: MSRIRSIHQDLYTVAAAIIEPLH*KPVQSL
Trigger: CAGGCTCTGGACCGGTTTGCAATGAAGCGGTTCTAT...TATAGCCGCTGCCACCGTGTATAAATCCTGGTGTATGCTCCTTATCCTGGACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp CTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCATTGCATGATCACGTGGTaGAGAAACAAGGGCTTGTTG +
Preference number: 4 (lower is better)
Translates to: LRNWPKVLLLGSRVVRIHCMITW*RNKGLL
Trigger: CAACAAGCCCTTGTTTCTGCACCACGTGATCATGCA...ATGAATCCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp TTGATTTCCCCTTGCAAAGCAGTTGAGTTAGGGAGACAGAGCTTTTCCATTCCCAAGTTGGGGATGCCGTaGATGATCACGTGGTGCAGA +
Preference number: 4 (lower is better)
Translates to: LISPCKAVELGRQSFSIPKLGMP*MITWCR
Trigger: TCTGCACCACGTGATCATGCACGGCATCCCCAACTT...GGGAATGGAAAAGCTCTGTCTCCCTAACTCAACTGCTTTGCAAGGGGAAATCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp GGACAGGAGCCCCAACATGAAGTTCTCAGTGCAAAGCTTTGGATTCTGGCTTGGCTGGGATGTTGTAGATaGCAGATGTGTACACAGGTT +
Preference number: 4 (lower is better)
Translates to: GQEPQHEVLSAKLWILAWLGCCR*QMCTQV
Trigger: AACCTGTGTACACATCTGGCATCTACAACATCCCAG...CCAAGCCAGAATCCAAAGCTTTGCACTGAGAACTTCATGTTGGGGCTCCTGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310858.10
CDS-3UTR GCA 90 bp TTGGAGGCTTTGGGTTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTAGTTGCCCGAGTCGCTaGTCACAGAAAGCGTGTGTT +
Preference number: 4 (lower is better)
Translates to: LEALGFCSFHLPRGIQVLSCPSR*SQKACV
Trigger: AACACACGCTTTCTGTGAGCAGCGACTCGGGCAACT...AAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAACCCAAAGCCTCCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp GAAATCTTTGGCAAGAATATACTGCAGTGCGGAGTGTTGTGTGTGCGTAGGTGTTGGTACATGGCGCCTTaGTTCTCTCGCTCTAAGCCA +
Preference number: 4 (lower is better)
Translates to: EIFGKNILQCGVLCVRRCWYMAP*FSRSKP
Trigger: TGGCTTAGAGCGAGAGAAGCAAGGCGCCATGTACCA...ACACCTACGCACACACAACACTCCGCACTGCAGTATATTCTTGCCAAAGATTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp GTTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTCTCCTCCATCTTTGAATTCAGTCCCCTTTaGACAGCCTCCCGGCTGCTT +
Preference number: 4 (lower is better)
Translates to: VFAVSIYPGESKFFSSIFEFSPL*TASRLL
Trigger: AAGCAGCCGGGAGGCTGTGCAAAGGGGACTGAATTC...AAAGATGGAGGAGAAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp AGGTGCCTTGGGTCTGAGATACTTTCAAGCAAACAAGTTCTTCCACTTGATGTCGAATTCAGTCCCCTTTaGACAGCCTCCCGGCTGCTT +
Preference number: 4 (lower is better)
Translates to: RCLGSEILSSKQVLPLDVEFSPL*TASRLL
Trigger: AAGCAGCCGGGAGGCTGTGCAAAGGGGACTGAATTC...GACATCAAGTGGAAGAACTTGTTTGCTTGAAAGTATCTCAGACCCAAGGCACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp TTGGAGGCTTTGGGTTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTAAGGTGAGTAAGACCTaGCAGGAGGGACAGACTCCA +
Preference number: 4 (lower is better)
Translates to: LEALGFCSFHLPRGIQVLKVSKT*QEGQTP
Trigger: TGGAGTCTGTCCCTCCTGGCAGGTCTTACTCACCTT...AAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAACCCAAAGCCTCCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp TCTAGATCAATGTGTGAGGATGTGGGTGCAGACACACACCCACACGACAATATAAAGGTGAGTAAGACCTaGCAGGAGGGACAGACTCCA +
Preference number: 4 (lower is better)
Translates to: SRSMCEDVGADTHPHDNIKVSKT*QEGQTP
Trigger: TGGAGTCTGTCCCTCCTGGCAGGTCTTACTCACCTT...TATATTGTCGTGTGGGTGTGTGTCTGCACCCACATCCTCACACATTGATCTAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp TTGATTTCCCCTTGCAAAGCAGTTGAGTTAGGGAGACAGAGCTTTTCCATTCCCTACCATGGAAGCCAGTaGCTGGTGGACCCATCATCT +
Preference number: 4 (lower is better)
Translates to: LISPCKAVELGRQSFSIPYHGSQ*LVDPSS
Trigger: AGATGATGGGTCCACCAGGCACTGGCTTCCATGGTA...GGGAATGGAAAAGCTCTGTCTCCCTAACTCAACTGCTTTGCAAGGGGAAATCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp TTGATTTCCCCTTGCAAAGCAGTTGAGTTAGGGAGACAGAGCTTTTCCATTCCCGGCTGGCTATTGCATTaGTATGAAGACCGGAGGCCA +
Preference number: 4 (lower is better)
Translates to: LISPCKAVELGRQSFSIPGWLLH*YEDRRP
Trigger: TGGCCTCCGGTCTTCATAGCAATGCAATAGCCAGCC...GGGAATGGAAAAGCTCTGTCTCCCTAACTCAACTGCTTTGCAAGGGGAAATCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp GATCTAGATCAATGTGTGAGGATGTGGGTGCAGACACACACCCACACGACAATATCCAGGGCTGGCTATTaGATTGCTATGAAGACCGGA +
Preference number: 4 (lower is better)
Translates to: DLDQCVRMWVQTHTHTTISRAGY*IAMKTG
Trigger: TCCGGTCTTCATAGCAATGCAATAGCCAGCCCTGGA...TATTGTCGTGTGGGTGTGTGTCTGCACCCACATCCTCACACATTGATCTAGATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp TCTGCAATTCACTTCCCTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATTTCCAGGGCTGGCTATTaGATTGCTATGAAGACCGGA +
Preference number: 4 (lower is better)
Translates to: SAIHFPLPTLHFLLSSEISRAGY*IAMKTG
Trigger: TCCGGTCTTCATAGCAATGCAATAGCCAGCCCTGGA...AATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGGGAAGTGAATTGCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp ATTTACAAAGGAAGGGGATGGGAAATATCTCCTATCTTGGAAGATAATTGGGGTGGTCCAAGCAGGGGCTaGCGGGAACCACAGATCCAG +
Preference number: 4 (lower is better)
Translates to: IYKGRGWEISPILEDNWGGPSRG*REPQIQ
Trigger: CTGGATCTGTGGTTCCCGGCAGCCCCTGCTTGGACC...ACCCCAATTATCTTCCAAGATAGGAGATATTTCCCATCCCCTTCCTTTGTAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp ATTTACAAAGGAAGGGGATGGGAAATATCTCCTATCTTGGAAGATAATTGGGGTCCAGAGGCACTGCTCTaGCGGGACAGTGTGGGTCTC +
Preference number: 4 (lower is better)
Translates to: IYKGRGWEISPILEDNWGPEALL*RDSVGL
Trigger: GAGACCCACACTGTCCCGGCAGAGCAGTGCCTCTGG...ACCCCAATTATCTTCCAAGATAGGAGATATTTCCCATCCCCTTCCTTTGTAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp CTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCATGTCTCTATCAGAAAATaGCTGACCAGCTCATGGGTC +
Preference number: 4 (lower is better)
Translates to: LRNWPKVLLLGSRVVRIHVSIRK*LTSSWV
Trigger: GACCCATGAGCTGGTCAGGCATTTTCTGATAGAGAC...ATGAATCCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp TTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTCTCCTCCATCTTTCTCCCTCTCCCCACGTTaGACTTTCTTCTCTCCTCCG +
Preference number: 4 (lower is better)
Translates to: FLQFPSTQGNPSSSPPSFSLSPR*TFFSPP
Trigger: CGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGGGA...GAAAGATGGAGGAGAAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp CCCAGCTTGATTTCCCCTTGCAAAGCAGTTGAGTTAGGGAGACAGAGCTTTTCCGAGGCTTTGGGTTTTTaGAGTTTCCATCTACCCAGG +
Preference number: 4 (lower is better)
Translates to: PSLISPCKAVELGRQSFSEALGF*SFHLPR
Trigger: CCTGGGTAGATGGAAACTGCAAAAACCCAAAGCCTC...GGAAAAGCTCTGTCTCCCTAACTCAACTGCTTTGCAAGGGGAAATCAAGCTGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp CTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCATGAGGCTTTGGGTTTTTaGAGTTTCCATCTACCCAGG +
Preference number: 4 (lower is better)
Translates to: LRNWPKVLLLGSRVVRIHEALGF*SFHLPR
Trigger: CCTGGGTAGATGGAAACTGCAAAAACCCAAAGCCTC...ATGAATCCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp CTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCATCAAAGAGACCTGAGGTaGCTTGGGTCTGAGATACTT +
Preference number: 4 (lower is better)
Translates to: LRNWPKVLLLGSRVVRIHQRDLR*LGSEIL
Trigger: AAGTATCTCAGACCCAAGGCACCTCAGGTCTCTTTG...ATGAATCCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp TTGATTTCCCCTTGCAAAGCAGTTGAGTTAGGGAGACAGAGCTTTTCCATTCCCAGACCCTCCCACTCCTaGTGGGGTCTTTGTAGAAGA +
Preference number: 4 (lower is better)
Translates to: LISPCKAVELGRQSFSIPRPSHS*WGLCRR
Trigger: TCTTCTACAAAGACCCCAGCAGGAGTGGGAGGGTCT...GGGAATGGAAAAGCTCTGTCTCCCTAACTCAACTGCTTTGCAAGGGGAAATCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp GTTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTCTCCTCCATCTTTCCAACACAGGGACCCTaGAGAATAGAACAGGGCTGG +
Preference number: 4 (lower is better)
Translates to: VFAVSIYPGESKFFSSIFPTQGP*RIEQGW
Trigger: CCAGCCCTGTTCTATTCTGCAGGGTCCCTGTGTTGG...AAAGATGGAGGAGAAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp ATTTACAAAGGAAGGGGATGGGAAATATCTCCTATCTTGGAAGATAATTGGGGTGTAGGCGATGTGGTGTaGAGGCAGCAGGCCCAGGAG +
Preference number: 4 (lower is better)
Translates to: IYKGRGWEISPILEDNWGVGDVV*RQQAQE
Trigger: CTCCTGGGCCTGCTGCCTGCACACCACATCGCCTAC...ACCCCAATTATCTTCCAAGATAGGAGATATTTCCCATCCCCTTCCTTTGTAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp TCTCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGTATATATCAGTACAATaGCTCTCTCTAGGGGACTCG +
Preference number: 4 (lower is better)
Translates to: SLLRNWPKVLLLGSRVVRYISVQ*LSLGDS
Trigger: CGAGTCCCCTAGAGAGAGGCATTGTACTGATATATA...CCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp AATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCATGGGTCCAAGAATATACTGCAGTaGGGAGTGTTGTGTGTGCGT +
Preference number: 4 (lower is better)
Translates to: NWPKVLLLGSRVVRIHGSKNILQ*GVLCVR
Trigger: ACGCACACACAACACTCCGCACTGCAGTATATTCTT...GGACCCATGAATCCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp GTTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTCTCCTCCATCTTTCACAGCTGTCCTCCATaGTCCGGCTCACACTCATGT +
Preference number: 4 (lower is better)
Translates to: VFAVSIYPGESKFFSSIFHSCPP*SGSHSC
Trigger: ACATGAGTGTGAGCCGGACCATGGAGGACAGCTGTG...AAAGATGGAGGAGAAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TCTGCAATTCACTTCCCTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATTTCCAGTACCTTGGCATaGAGCTTCGTGATGTCAGGT +
Preference number: 4 (lower is better)
Translates to: SAIHFPLPTLHFLLSSEISSTLA*SFVMSG
Trigger: ACCTGACATCACGAAGCTCCATGCCAAGGTACTGGA...AATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGGGAAGTGAATTGCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TTGGAGGCTTTGGGTTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTGAGCCTGGTCCGCACTaGCAGAAATGTTGCTGTAGT +
Preference number: 4 (lower is better)
Translates to: LEALGFCSFHLPRGIQVLEPGPH*QKCCCS
Trigger: ACTACAGCAACATTTCTGCCAGTGCGGACCAGGCTC...AAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAACCCAAAGCCTCCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TCTAGATCAATGTGTGAGGATGTGGGTGCAGACACACACCCACACGACAATATAGAGCCTGGTCCGCACTaGCAGAAATGTTGCTGTAGT +
Preference number: 4 (lower is better)
Translates to: SRSMCEDVGADTHPHDNIEPGPH*QKCCCS
Trigger: ACTACAGCAACATTTCTGCCAGTGCGGACCAGGCTC...TATATTGTCGTGTGGGTGTGTGTCTGCACCCACATCCTCACACATTGATCTAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp CTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCATCTTCTTTGGGATGGCTaGCCAATGGGCACAATCTTA +
Preference number: 4 (lower is better)
Translates to: LRNWPKVLLLGSRVVRIHLLWDG*PMGTIL
Trigger: TAAGATTGTGCCCATTGGCCAGCCATCCCAAAGAAG...ATGAATCCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp AGATCTAGATCAATGTGTGAGGATGTGGGTGCAGACACACACCCACACGACAATGTACCTTCTTTGGGATaGCTGGCCAATGGGCACAAT +
Preference number: 4 (lower is better)
Translates to: RSRSMCEDVGADTHPHDNVPSLG*LANGHN
Trigger: ATTGTGCCCATTGGCCAGCCATCCCAAAGAAGGTAC...ATTGTCGTGTGGGTGTGTGTCTGCACCCACATCCTCACACATTGATCTAGATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp ACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTAGTCTGGCTGTCTCCTaGGATGTTGTAGATGCCAGA +
Preference number: 4 (lower is better)
Translates to: TFFSPPKLAQSPPSGFKSSLAVS*DVVDAR
Trigger: TCTGGCATCTACAACATCCCAGGAGACAGCCAGACT...ACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TCTAGATCAATGTGTGAGGATGTGGGTGCAGACACACACCCACACGACAATATAACAAGACTCTCCAAGTaGGCTCTTTCCTGCTGGCGT +
Preference number: 4 (lower is better)
Translates to: SRSMCEDVGADTHPHDNITRLSK*ALSCWR
Trigger: ACGCCAGCAGGAAAGAGCCCACTTGGAGAGTCTTGT...TATATTGTCGTGTGGGTGTGTGTCTGCACCCACATCCTCACACATTGATCTAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TCTCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGTTTGAATGGAAATCCTaGTTAGGCCCAGCCAAACAT +
Preference number: 4 (lower is better)
Translates to: SLLRNWPKVLLLGSRVVRFEWKS*LGPAKH
Trigger: ATGTTTGGCTGGGCCTAACCAGGATTTCCATTCAAA...CCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp ACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGCTGGGCTCTTTGAATaGAAATCCTGGTTAGGCCCA +
Preference number: 4 (lower is better)
Translates to: TFFSPPKLAQSPPSGFKSAGLFE*KSWLGP
Trigger: TGGGCCTAACCAGGATTTCCATTCAAAGAGCCCAGC...ACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp ATTTACAAAGGAAGGGGATGGGAAATATCTCCTATCTTGGAAGATAATTGGGGTCATACTGTCCATCACTaGCCGCCCGCCTCCGCAGAG +
Preference number: 4 (lower is better)
Translates to: IYKGRGWEISPILEDNWGHTVHH*PPASAE
Trigger: CTCTGCGGAGGCGGGCGGCCAGTGATGGACAGTATG...ACCCCAATTATCTTCCAAGATAGGAGATATTTCCCATCCCCTTCCTTTGTAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp GTTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTCTCCTCCATCTTTCAACAGGATGTCCGCTaGGTTGTGAGGTTTCAGGCC +
Preference number: 4 (lower is better)
Translates to: VFAVSIYPGESKFFSSIFQQDVR*VVRFQA
Trigger: GGCCTGAAACCTCACAACCCAGCGGACATCCTGTTG...AAAGATGGAGGAGAAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTCTCCTCCATCTTTCCAACAGGATGTCCGCTaGGTTGTGAGGTTTCAGGCC +
Preference number: 4 (lower is better)
Translates to: FLQFPSTQGNPSSSPPSFQQDVR*VVRFQA
Trigger: GGCCTGAAACCTCACAACCCAGCGGACATCCTGTTG...GAAAGATGGAGGAGAAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp AGGTGCCTTGGGTCTGAGATACTTTCAAGCAAACAAGTTCTTCCACTTGATGTCATGGAAGCCAGTGCCTaGTGGACCCATCATCTGGTG +
Preference number: 4 (lower is better)
Translates to: RCLGSEILSSKQVLPLDVMEASA*WTHHLV
Trigger: CACCAGATGATGGGTCCACCAGGCACTGGCTTCCAT...GACATCAAGTGGAAGAACTTGTTTGCTTGAAAGTATCTCAGACCCAAGGCACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TCTAGATCAATGTGTGAGGATGTGGGTGCAGACACACACCCACACGACAATATACTCCGGGCTGTTGTCTaGCATGGAGTACTTGGAGAA +
Preference number: 4 (lower is better)
Translates to: SRSMCEDVGADTHPHDNILRAVV*HGVLGE
Trigger: TTCTCCAAGTACTCCATGCCAGACAACAGCCCGGAG...TATATTGTCGTGTGGGTGTGTGTCTGCACCCACATCCTCACACATTGATCTAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp GGGGAAGACACCCCGAGCTCAACAGCTGCCTGTTCTGACAGATCTCTTCCTATGTACTTAGAAGTGTCCTaGACAAACTTCACTTTAGCC +
Preference number: 4 (lower is better)
Translates to: GEDTPSSTAACSDRSLPMYLEVS*TNFTLA
Trigger: GGCTAAAGTGAAGTTTGTCCAGGACACTTCTAAGTA...CATAGGAAGAGATCTGTCAGAACAGGCAGCTGTTGAGCTCGGGGTGTCTTCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp ATTTACAAAGGAAGGGGATGGGAAATATCTCCTATCTTGGAAGATAATTGGGGTGCGAAGACACCTTCATaGCCAGCCCGTACGCGCCTC +
Preference number: 4 (lower is better)
Translates to: IYKGRGWEISPILEDNWGAKTPS*PARTRL
Trigger: GAGGCGCGTACGGGCTGGCCATGAAGGTGTCTTCGC...ACCCCAATTATCTTCCAAGATAGGAGATATTTCCCATCCCCTTCCTTTGTAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp AGGTGCCTTGGGTCTGAGATACTTTCAAGCAAACAAGTTCTTCCACTTGATGTCGCAAGGCAGGGCCAATaGGATGATGGAGTGCTGGTA +
Preference number: 4 (lower is better)
Translates to: RCLGSEILSSKQVLPLDVARQGQ*DDGVLV
Trigger: TACCAGCACTCCATCATCCCATTGGCCCTGCCTTGC...GACATCAAGTGGAAGAACTTGTTTGCTTGAAAGTATCTCAGACCCAAGGCACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp AGATCTAGATCAATGTGTGAGGATGTGGGTGCAGACACACACCCACACGACAATAGGGTTCATCTCTTTTaGCCGGCATTCAGCATGACC +
Preference number: 4 (lower is better)
Translates to: RSRSMCEDVGADTHPHDNRVHLF*PAFSMT
Trigger: GGTCATGCTGAATGCCGGCCAAAAGAGATGAACCCT...ATTGTCGTGTGGGTGTGTGTCTGCACCCACATCCTCACACATTGATCTAGATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TCTGCAATTCACTTCCCTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATTAACCTACCCCACAGGTaGCCAGAAAAAGATTCTCCC +
Preference number: 4 (lower is better)
Translates to: SAIHFPLPTLHFLLSSEINLPHR*PEKDSP
Trigger: GGGAGAATCTTTTTCTGGCCACCTGTGGGGTAGGTT...AATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGGGAAGTGAATTGCAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp CCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGACCAACCCTAATCTTTaGACAGTATGCATGTGTGTC +
Preference number: 4 (lower is better)
Translates to: PRCTFFSPPKLAQSPPSGTNPNL*TVCMCV
Trigger: GACACACATGCATACTGTCCAAAGATTAGGGTTGGT...CCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TCTAGATCAATGTGTGAGGATGTGGGTGCAGACACACACCCACACGACAATATACTGTCACCCATAGCTTaGTTGTTTGTCCCTCCCCTG +
Preference number: 4 (lower is better)
Translates to: SRSMCEDVGADTHPHDNILSPIA*LFVPPL
Trigger: CAGGGGAGGGACAAACAACCAAGCTATGGGTGACAG...TATATTGTCGTGTGGGTGTGTGTCTGCACCCACATCCTCACACATTGATCTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TTGATTTCCCCTTGCAAAGCAGTTGAGTTAGGGAGACAGAGCTTTTCCATTCCCCCCTCCCACTCCTGCTaGGGTCTTTGTAGAAGAGAA +
Preference number: 4 (lower is better)
Translates to: LISPCKAVELGRQSFSIPPSHSC*GLCRRE
Trigger: TTCTCTTCTACAAAGACCCCAGCAGGAGTGGGAGGG...GGGAATGGAAAAGCTCTGTCTCCCTAACTCAACTGCTTTGCAAGGGGAAATCAA
49% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp ACCCTCCTTTCCAACTCCCTGAAACAGAACGTCCACACTGACACAGCTCCTTGGAGAGTCCTTAAATGGTaGTCAGGTGTTTTCCCAACT +
Preference number: 4 (lower is better)
Translates to: TLLSNSLKQNVHTDTAPWRVLKW*SGVFPT
Trigger: AGTTGGGAAAACACCTGACCACCATTTAAGGACTCT...CCAAGGAGCTGTGTCAGTGTGGACGTTCTGTTTCAGGGAGTTGGAAAGGAGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TCTCCTGGCCAGTCTCAGAAGACCCAGGGATCCTCAAAAACCAGGGGAGAAGGAAAAAAGGATAGGAATTaGTTTATCCCCAAGGAAGGC +
Preference number: 4 (lower is better)
Translates to: SPGQSQKTQGSSKTRGEGKKDRN*FIPKEG
Trigger: GCCTTCCTTGGGGATAAACCAATTCCTATCCTTTTT...TCCTTCTCCCCTGGTTTTTGAGGATCCCTGGGTCTTCTGAGACTGGCCAGGAGA
49% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TTGATTTCCCCTTGCAAAGCAGTTGAGTTAGGGAGACAGAGCTTTTCCATTCCCAGGGCAAGGAGACCCTaGCTGCTTCAAGAACAAAGG +
Preference number: 4 (lower is better)
Translates to: LISPCKAVELGRQSFSIPRARRP*LLQEQR
Trigger: CCTTTGTTCTTGAAGCAGCCAGGGTCTCCTTGCCCT...GGGAATGGAAAAGCTCTGTCTCCCTAACTCAACTGCTTTGCAAGGGGAAATCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp CCTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCCTCCTACAAAGGAAGGGGATaGGAAATATCTCCTATCTTG +
Preference number: 4 (lower is better)
Translates to: PLPTLHFLLSSEIGPKSSYKGRG*EISPIL
Trigger: CAAGATAGGAGATATTTCCCATCCCCTTCCTTTGTA...GGAGGACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCCTGGGCTCTCCAGTaGGAGATGAGATATTTACAA +
Preference number: 4 (lower is better)
Translates to: SPPKLAQSPPSGFKSGQDSWALQ*EMRYLQ
Trigger: TTGTAAATATCTCATCTCCCACTGGAGAGCCCAGGA...ATCCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp AGGTGCCTTGGGTCTGAGATACTTTCAAGCAAACAAGTTCTTCCACTTGATGTCCTTCCGCAGGGATGCTaGGAGGGAGTTACCAGCTTT +
Preference number: 4 (lower is better)
Translates to: RCLGSEILSSKQVLPLDVLPQGC*EGVTSF
Trigger: AAAGCTGGTAACTCCCTCCCAGCATCCCTGCGGAAG...GACATCAAGTGGAAGAACTTGTTTGCTTGAAAGTATCTCAGACCCAAGGCACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTCTCCTCCATCTTTCCCCTCTTGCTCCCTTTaGGAAAAAGCCACGTGGAGC +
Preference number: 4 (lower is better)
Translates to: FLQFPSTQGNPSSSPPSFPSCSL*EKATWS
Trigger: GCTCCACGTGGCTTTTTCCCAAAGGGAGCAAGAGGG...GAAAGATGGAGGAGAAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp AATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCATGGGTCCGGTCCTCCAACATTTTaGACATTTGAGGACAGAGGT +
Preference number: 4 (lower is better)
Translates to: NWPKVLLLGSRVVRIHGSGPPTF*TFEDRG
Trigger: ACCTCTGTCCTCAAATGTCCAAAATGTTGGAGGACC...GGACCCATGAATCCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp AGGTGCCTTGGGTCTGAGATACTTTCAAGCAAACAAGTTCTTCCACTTGATGTCGCAAGAGCCCAGGCGTaGGATATGAACAGAGGTCCT +
Preference number: 4 (lower is better)
Translates to: RCLGSEILSSKQVLPLDVARAQA*DMNRGP
Trigger: AGGACCTCTGTTCATATCCCACGCCTGGGCTCTTGC...GACATCAAGTGGAAGAACTTGTTTGCTTGAAAGTATCTCAGACCCAAGGCACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTCTCCTCCATCTTTCGCAGCTGTACAGGAGTaGGGACGCGTCAGTGTACAA +
Preference number: 4 (lower is better)
Translates to: FLQFPSTQGNPSSSPPSFAAVQE*GRVSVQ
Trigger: TTGTACACTGACGCGTCCCCACTCCTGTACAGCTGC...GAAAGATGGAGGAGAAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp AGCCCCAACATGAAGTTCTCAGTGCAAAGCTTTGGATTCTGGCTTGGCAACTTGAGGCCAGTGTGTGTCTaGCCAGGTATATTGATCCTC +
Preference number: 4 (lower is better)
Translates to: SPNMKFSVQSFGFWLGNLRPVCV*PGILIL
Trigger: GAGGATCAATATACCTGGCCAGACACACACTGGCCT...CAAGTTGCCAAGCCAGAATCCAAAGCTTTGCACTGAGAACTTCATGTTGGGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310858.10
CDS-3UTR TCA 90 bp TCTGCAATTCACTTCCCTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATTAGAACAACGACATTGTaGGGGTCTGCATTGAGCCAT +
Preference number: 4 (lower is better)
Translates to: SAIHFPLPTLHFLLSSEIRTTTL*GSALSH
Trigger: ATGGCTCAATGCAGACCCTCACAATGTCGTTGTTCT...AATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGGGAAGTGAATTGCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp ATTTACAAAGGAAGGGGATGGGAAATATCTCCTATCTTGGAAGATAATTGGGGTACTGCACACGGAAGATaGCGTCTCGGGCTGGGCTTC +
Preference number: 4 (lower is better)
Translates to: IYKGRGWEISPILEDNWGTAHGR*RLGLGF
Trigger: GAAGCCCAGCCCGAGACGTCATCTTCCGTGTGCAGT...ACCCCAATTATCTTCCAAGATAGGAGATATTTCCCATCCCCTTCCTTTGTAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp AGGTGCCTTGGGTCTGAGATACTTTCAAGCAAACAAGTTCTTCCACTTGATGTCGCTTCCGAAAAGGATTaGGAGCGGAACATACCGCTG +
Preference number: 4 (lower is better)
Translates to: RCLGSEILSSKQVLPLDVASEKD*ERNIPL
Trigger: CAGCGGTATGTTCCGCTCTCAATCCTTTTCGGAAGC...GACATCAAGTGGAAGAACTTGTTTGCTTGAAAGTATCTCAGACCCAAGGCACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp CTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCATCCAGCATCAGCATATTaGGTGTTTCGATGGACTGTT +
Preference number: 4 (lower is better)
Translates to: LRNWPKVLLLGSRVVRIHPASAY*VFRWTV
Trigger: AACAGTCCATCGAAACACTCAATATGCTGATGCTGG...ATGAATCCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp TTGGGTTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTCTCCTCCATCTGATAGTCATAAGGTaGGTAAGACCTGCCAGGAGG +
Preference number: 4 (lower is better)
Translates to: LGFCSFHLPRGIQVLLLHLIVIR*VRPARR
Trigger: CCTCCTGGCAGGTCTTACTCACCTTATGACTATCAG...ATGGAGGAGAAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAACCCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp TTGATTTCCCCTTGCAAAGCAGTTGAGTTAGGGAGACAGAGCTTTTCCATTCCCAGAGGCTGGGCTCTTTaGATGGAAATCCTGGTTAGG +
Preference number: 4 (lower is better)
Translates to: LISPCKAVELGRQSFSIPRGWAL*MEILVR
Trigger: CCTAACCAGGATTTCCATTCAAAGAGCCCAGCCTCT...GGGAATGGAAAAGCTCTGTCTCCCTAACTCAACTGCTTTGCAAGGGGAAATCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp TCTGCAATTCACTTCCCTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATTTTTCCGGAGAGGAGCTaGAATGCTGAAGTGAGTAGT +
Preference number: 4 (lower is better)
Translates to: SAIHFPLPTLHFLLSSEIFPERS*NAEVSS
Trigger: ACTACTCACTTCAGCATTTCAGCTCCTCTCCGGAAA...AATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGGGAAGTGAATTGCAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp ACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTCTATCAGAAAATGCCTaGCCAGCTCATGGGTCATGT +
Preference number: 4 (lower is better)
Translates to: TFFSPPKLAQSPPSGFKSLSENA*PAHGSC
Trigger: ACATGACCCATGAGCTGGTCAGGCATTTTCTGATAG...ACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp GTTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTCTCCTCCATCTTTCCATGTCCACAGAGTTaGCGAAGAGCACATTGCAGG +
Preference number: 4 (lower is better)
Translates to: VFAVSIYPGESKFFSSIFPCPQS*RRAHCR
Trigger: CCTGCAATGTGCTCTTCGTCAACTCTGTGGACATGG...AAAGATGGAGGAGAAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp GTTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTCTCCTCCATCTTTGGTTGTCAGTCAGAGTaGTTCCCTGGGCAGAGACTT +
Preference number: 4 (lower is better)
Translates to: VFAVSIYPGESKFFSSIFGCQSE*FPGQRL
Trigger: AAGTCTCTGCCCAGGGAATCACTCTGACTGACAACC...AAAGATGGAGGAGAAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp TTGATTTCCCCTTGCAAAGCAGTTGAGTTAGGGAGACAGAGCTTTTCCATTCCCGAGGGTAGTGGCGTCTaGAAAAGAGCTTTCTCTGGT +
Preference number: 4 (lower is better)
Translates to: LISPCKAVELGRQSFSIPEGSGV*KRAFSG
Trigger: ACCAGAGAAAGCTCTTTTTCAGACGCCACTACCCTC...GGGAATGGAAAAGCTCTGTCTCCCTAACTCAACTGCTTTGCAAGGGGAAATCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp TTGGAGGCTTTGGGTTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTGAGGGTAGTGGCGTCTaGAAAAGAGCTTTCTCTGGT +
Preference number: 4 (lower is better)
Translates to: LEALGFCSFHLPRGIQVLEGSGV*KRAFSG
Trigger: ACCAGAGAAAGCTCTTTTTCAGACGCCACTACCCTC...AAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAACCCAAAGCCTCCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp AGGTGCCTTGGGTCTGAGATACTTTCAAGCAAACAAGTTCTTCCACTTGATGTCACAAGTTCTTCCACTTaGTGTCCCACGGTGGCTCTG +
Preference number: 4 (lower is better)
Translates to: RCLGSEILSSKQVLPLDVTSSST*CPTVAL
Trigger: CAGAGCCACCGTGGGACATCAAGTGGAAGAACTTGT...GACATCAAGTGGAAGAACTTGTTTGCTTGAAAGTATCTCAGACCCAAGGCACCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp GATCTAGATCAATGTGTGAGGATGTGGGTGCAGACACACACCCACACGACAATAGAGGTGCCTTGGGTCTaGGATACTTTCAAGCAAACA +
Preference number: 4 (lower is better)
Translates to: DLDQCVRMWVQTHTHTTIEVPWV*DTFKQT
Trigger: TGTTTGCTTGAAAGTATCTCAGACCCAAGGCACCTC...TATTGTCGTGTGGGTGTGTGTCTGCACCCACATCCTCACACATTGATCTAGATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp CTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCATCTCTCCAGTGGGAGATaGGATATTTACAAAGGAAGG +
Preference number: 4 (lower is better)
Translates to: LRNWPKVLLLGSRVVRIHLSSGR*DIYKGR
Trigger: CCTTCCTTTGTAAATATCTCATCTCCCACTGGAGAG...ATGAATCCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp TCTAGATCAATGTGTGAGGATGTGGGTGCAGACACACACCCACACGACAATATACAGCGCTCTCCTGGCTaGCACACAGATTCAACAATA +
Preference number: 4 (lower is better)
Translates to: SRSMCEDVGADTHPHDNIQRSPG*HTDSTI
Trigger: TATTGTTGAATCTGTGTGTCAGCCAGGAGAGCGCTG...TATATTGTCGTGTGGGTGTGTGTCTGCACCCACATCCTCACACATTGATCTAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp TTGGAGGCTTTGGGTTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTCAGCGCTCTCCTGGCTaGCACACAGATTCAACAATA +
Preference number: 4 (lower is better)
Translates to: LEALGFCSFHLPRGIQVLQRSPG*HTDSTI
Trigger: TATTGTTGAATCTGTGTGTCAGCCAGGAGAGCGCTG...AAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAACCCAAAGCCTCCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp AGGTGCCTTGGGTCTGAGATACTTTCAAGCAAACAAGTTCTTCCACTTGATGTCACCGTGATAGCAGGCTaGTCAAACCGCTCACTTCCT +
Preference number: 4 (lower is better)
Translates to: RCLGSEILSSKQVLPLDVTVIAG*SNRSLP
Trigger: AGGAAGTGAGCGGTTTGATCAGCCTGCTATCACGGT...GACATCAAGTGGAAGAACTTGTTTGCTTGAAAGTATCTCAGACCCAAGGCACCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp AGGTGCCTTGGGTCTGAGATACTTTCAAGCAAACAAGTTCTTCCACTTGATGTCTGGCCTTACAGATGCTaGAGATCTTCTCCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: RCLGSEILSSKQVLPLDVWPYRC*RSSPGL
Trigger: CAGCCCTGGAGAAGATCTGCAGCATCTGTAAGGCCA...GACATCAAGTGGAAGAACTTGTTTGCTTGAAAGTATCTCAGACCCAAGGCACCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp AGGTGCCTTGGGTCTGAGATACTTTCAAGCAAACAAGTTCTTCCACTTGATGTCCCATGGCCTTACAGATaGTGCAGATCTTCTCCAGGG +
Preference number: 4 (lower is better)
Translates to: RCLGSEILSSKQVLPLDVPWPYR*CRSSPG
Trigger: CCCTGGAGAAGATCTGCAGCATCTGTAAGGCCATGG...GACATCAAGTGGAAGAACTTGTTTGCTTGAAAGTATCTCAGACCCAAGGCACCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp AGCCCCAACATGAAGTTCTCAGTGCAAAGCTTTGGATTCTGGCTTGGCAACTTGGACATTGTGAGGGTCTaGATTGAGCCATGTGTCCAT +
Preference number: 4 (lower is better)
Translates to: SPNMKFSVQSFGFWLGNLDIVRV*IEPCVH
Trigger: ATGGACACATGGCTCAATGCAGACCCTCACAATGTC...CAAGTTGCCAAGCCAGAATCCAAAGCTTTGCACTGAGAACTTCATGTTGGGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310858.10
CDS-3UTR GCA 90 bp GATCTAGATCAATGTGTGAGGATGTGGGTGCAGACACACACCCACACGACAATAGACATTGTGAGGGTCTaGATTGAGCCATGTGTCCAT +
Preference number: 4 (lower is better)
Translates to: DLDQCVRMWVQTHTHTTIDIVRV*IEPCVH
Trigger: ATGGACACATGGCTCAATGCAGACCCTCACAATGTC...TATTGTCGTGTGGGTGTGTGTCTGCACCCACATCCTCACACATTGATCTAGATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp AGCCCCAACATGAAGTTCTCAGTGCAAAGCTTTGGATTCTGGCTTGGCAACTTGCACTGGCAGAAATGTTaGTGTAGTGCATGTAAGCCG +
Preference number: 4 (lower is better)
Translates to: SPNMKFSVQSFGFWLGNLHWQKC*CSACKP
Trigger: CGGCTTACATGCACTACAGCAACATTTCTGCCAGTG...CAAGTTGCCAAGCCAGAATCCAAAGCTTTGCACTGAGAACTTCATGTTGGGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310858.10
CDS-3UTR GCA 90 bp TCTGCAATTCACTTCCCTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATTCACTGGCAGAAATGTTaGTGTAGTGCATGTAAGCCG +
Preference number: 4 (lower is better)
Translates to: SAIHFPLPTLHFLLSSEIHWQKC*CSACKP
Trigger: CGGCTTACATGCACTACAGCAACATTTCTGCCAGTG...AATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGGGAAGTGAATTGCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp GTTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTCTCCTCCATCTTTAAGTTGGGGATGCCGTaGATGATCACGTGGTGCAGA +
Preference number: 4 (lower is better)
Translates to: VFAVSIYPGESKFFSSIFKLGMP*MITWCR
Trigger: TCTGCACCACGTGATCATGCACGGCATCCCCAACTT...AAAGATGGAGGAGAAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp TTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTCTCCTCCATCTTTCGCACAGGTGTGGAACTaGACACGGAAGATGACGTCT +
Preference number: 4 (lower is better)
Translates to: FLQFPSTQGNPSSSPPSFAQVWN*TRKMTS
Trigger: AGACGTCATCTTCCGTGTGCAGTTCCACACCTGTGC...GAAAGATGGAGGAGAAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp CCTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCCTCCATACAAACTCCACTTTaGCATACTCTGGAAATCGAT +
Preference number: 4 (lower is better)
Translates to: PLPTLHFLLSSEIGPKSSIQTPL*HTLEID
Trigger: ATCGATTTCCAGAGTATGGCAAAGTGGAGTTTGTAT...GGAGGACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp TTGATTTCCCCTTGCAAAGCAGTTGAGTTAGGGAGACAGAGCTTTTCCATTCCCTCTCCAGGTGCTCCATaGCTTGAATTTTCTCTGGCC +
Preference number: 4 (lower is better)
Translates to: LISPCKAVELGRQSFSIPSPGAP*LEFSLA
Trigger: GGCCAGAGAAAATTCAAGGCATGGAGCACCTGGAGA...GGGAATGGAAAAGCTCTGTCTCCCTAACTCAACTGCTTTGCAAGGGGAAATCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp ATTTACAAAGGAAGGGGATGGGAAATATCTCCTATCTTGGAAGATAATTGGGGTTGGAGGCTGTGGAGTTaGCCGAGTCGCTGCTCACAG +
Preference number: 4 (lower is better)
Translates to: IYKGRGWEISPILEDNWGWRLWS*PSRCSQ
Trigger: CTGTGAGCAGCGACTCGGGCAACTCCACAGCCTCCA...ACCCCAATTATCTTCCAAGATAGGAGATATTTCCCATCCCCTTCCTTTGTAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp AGGTGCCTTGGGTCTGAGATACTTTCAAGCAAACAAGTTCTTCCACTTGATGTCGGCTGGCTATTGCATTaGTATGAAGACCGGAGGCCA +
Preference number: 4 (lower is better)
Translates to: RCLGSEILSSKQVLPLDVGWLLH*YEDRRP
Trigger: TGGCCTCCGGTCTTCATAGCAATGCAATAGCCAGCC...GACATCAAGTGGAAGAACTTGTTTGCTTGAAAGTATCTCAGACCCAAGGCACCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp GAAATCTTTGGCAAGAATATACTGCAGTGCGGAGTGTTGTGTGTGCGTAGGTGTTCCAGGGCTGGCTATTaGATTGCTATGAAGACCGGA +
Preference number: 4 (lower is better)
Translates to: EIFGKNILQCGVLCVRRCSRAGY*IAMKTG
Trigger: TCCGGTCTTCATAGCAATGCAATAGCCAGCCCTGGA...ACACCTACGCACACACAACACTCCGCACTGCAGTATATTCTTGCCAAAGATTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp TCTGCAATTCACTTCCCTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATTGTCTCTATCAGAAAATaGCTGACCAGCTCATGGGTC +
Preference number: 4 (lower is better)
Translates to: SAIHFPLPTLHFLLSSEIVSIRK*LTSSWV
Trigger: GACCCATGAGCTGGTCAGGCATTTTCTGATAGAGAC...AATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGGGAAGTGAATTGCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp CTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCATAGCTTGATTTCCCCTTaGAAAGCAGTTGAGTTAGGG +
Preference number: 4 (lower is better)
Translates to: LRNWPKVLLLGSRVVRIHSLISP*KAVELG
Trigger: CCCTAACTCAACTGCTTTGCAAGGGGAAATCAAGCT...ATGAATCCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp ACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTCAAAGAGACCTGAGGTaGCTTGGGTCTGAGATACTT +
Preference number: 4 (lower is better)
Translates to: TFFSPPKLAQSPPSGFKSQRDLR*LGSEIL
Trigger: AAGTATCTCAGACCCAAGGCACCTCAGGTCTCTTTG...ACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp GGGGAAGACACCCCGAGCTCAACAGCTGCCTGTTCTGACAGATCTCTTCCTATGAATCTTTGGACAGTATaGATGTGTGTCTACAAACAC +
Preference number: 4 (lower is better)
Translates to: GEDTPSSTAACSDRSLPMNLWTV*MCVYKH
Trigger: GTGTTTGTAGACACACATGCATACTGTCCAAAGATT...CATAGGAAGAGATCTGTCAGAACAGGCAGCTGTTGAGCTCGGGGTGTCTTCCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp AGCCCCAACATGAAGTTCTCAGTGCAAAGCTTTGGATTCTGGCTTGGCAACTTGTCAGCCAACTCTTTTTaGCTTGGTCCTCATTGCAGG +
Preference number: 4 (lower is better)
Translates to: SPNMKFSVQSFGFWLGNLSANSF*LGPHCR
Trigger: CCTGCAATGAGGACCAAGGCAAAAAGAGTTGGCTGA...CAAGTTGCCAAGCCAGAATCCAAAGCTTTGCACTGAGAACTTCATGTTGGGGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310858.10
CDS-3UTR CCA 90 bp AGGTGCCTTGGGTCTGAGATACTTTCAAGCAAACAAGTTCTTCCACTTGATGTCGAGCCTGGTCCGCACTaGCAGAAATGTTGCTGTAGT +
Preference number: 4 (lower is better)
Translates to: RCLGSEILSSKQVLPLDVEPGPH*QKCCCS
Trigger: ACTACAGCAACATTTCTGCCAGTGCGGACCAGGCTC...GACATCAAGTGGAAGAACTTGTTTGCTTGAAAGTATCTCAGACCCAAGGCACCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TTGGAGGCTTTGGGTTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTGTACCTTCTTTGGGATaGCTGGCCAATGGGCACAAT +
Preference number: 4 (lower is better)
Translates to: LEALGFCSFHLPRGIQVLVPSLG*LANGHN
Trigger: ATTGTGCCCATTGGCCAGCCATCCCAAAGAAGGTAC...AAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAACCCAAAGCCTCCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TTGGAGGCTTTGGGTTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTAGTCTGGCTGTCTCCTaGGATGTTGTAGATGCCAGA +
Preference number: 4 (lower is better)
Translates to: LEALGFCSFHLPRGIQVLSLAVS*DVVDAR
Trigger: TCTGGCATCTACAACATCCCAGGAGACAGCCAGACT...AAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAACCCAAAGCCTCCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTCTCCTCCATCTTTCATGCAGACGCTAGTCTaGCTGTCTCCTGGGATGTTG +
Preference number: 4 (lower is better)
Translates to: FLQFPSTQGNPSSSPPSFMQTLV*LSPGML
Trigger: CAACATCCCAGGAGACAGCCAGACTAGCGTCTGCAT...GAAAGATGGAGGAGAAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp GTTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTCTCCTCCATCTTTATGCAGACGCTAGTCTaGCTGTCTCCTGGGATGTTG +
Preference number: 4 (lower is better)
Translates to: VFAVSIYPGESKFFSSIFMQTLV*LSPGML
Trigger: CAACATCCCAGGAGACAGCCAGACTAGCGTCTGCAT...AAAGATGGAGGAGAAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp CGATGCCATTGCAGACCCTCCCACTCCTGCTGGGGTCTTTGTAGAAGAGAAGGGGCCTTGAATTTTCTCTaGCCCATAAGAAAATACAAA +
Preference number: 4 (lower is better)
Translates to: RCHCRPSHSCWGLCRREGALNFL*PIRKYK
Trigger: TTTGTATTTTCTTATGGGCCAGAGAAAATTCAAGGC...CCCTTCTCTTCTACAAAGACCCCAGCAGGAGTGGGAGGGTCTGCAATGGCATCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp GTTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTCTCCTCCATCTTTACAAGACTCTCCAAGTaGGCTCTTTCCTGCTGGCGT +
Preference number: 4 (lower is better)
Translates to: VFAVSIYPGESKFFSSIFTRLSK*ALSCWR
Trigger: ACGCCAGCAGGAAAGAGCCCACTTGGAGAGTCTTGT...AAAGATGGAGGAGAAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTCTCCTCCATCTTTCGGATATAGCCAGATCTaGACTGGGTCAGTGGATGGG +
Preference number: 4 (lower is better)
Translates to: FLQFPSTQGNPSSSPPSFGYSQI*TGSVDG
Trigger: CCCATCCACTGACCCAGTCCAGATCTGGCTATATCC...GAAAGATGGAGGAGAAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp AGGTGCCTTGGGTCTGAGATACTTTCAAGCAAACAAGTTCTTCCACTTGATGTCCCAACGAATGCCCACTaGGGATATAGCCAGATCTGG +
Preference number: 4 (lower is better)
Translates to: RCLGSEILSSKQVLPLDVPTNAH*GYSQIW
Trigger: CCAGATCTGGCTATATCCCCAGTGGGCATTCGTTGG...GACATCAAGTGGAAGAACTTGTTTGCTTGAAAGTATCTCAGACCCAAGGCACCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TTGATTTCCCCTTGCAAAGCAGTTGAGTTAGGGAGACAGAGCTTTTCCATTCCCGCTGGGCTCTTTGAATaGAAATCCTGGTTAGGCCCA +
Preference number: 4 (lower is better)
Translates to: LISPCKAVELGRQSFSIPAGLFE*KSWLGP
Trigger: TGGGCCTAACCAGGATTTCCATTCAAAGAGCCCAGC...GGGAATGGAAAAGCTCTGTCTCCCTAACTCAACTGCTTTGCAAGGGGAAATCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TTGGAGGCTTTGGGTTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTGCTGGGCTCTTTGAATaGAAATCCTGGTTAGGCCCA +
Preference number: 4 (lower is better)
Translates to: LEALGFCSFHLPRGIQVLAGLFE*KSWLGP
Trigger: TGGGCCTAACCAGGATTTCCATTCAAAGAGCCCAGC...AAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAACCCAAAGCCTCCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp ATTTACAAAGGAAGGGGATGGGAAATATCTCCTATCTTGGAAGATAATTGGGGTGGTGATGGCTCAAACTaGGACTGCTGGGGGCAGCCA +
Preference number: 4 (lower is better)
Translates to: IYKGRGWEISPILEDNWGGDGSN*DCWGQP
Trigger: TGGCTGCCCCCAGCAGTCCCAGTTTGAGCCATCACC...ACCCCAATTATCTTCCAAGATAGGAGATATTTCCCATCCCCTTCCTTTGTAAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TCTAGATCAATGTGTGAGGATGTGGGTGCAGACACACACCCACACGACAATATATGGGGCTTCCAGGGCTaGCTATTGCATTGCTATGAA +
Preference number: 4 (lower is better)
Translates to: SRSMCEDVGADTHPHDNIWGFQG*LLHCYE
Trigger: TTCATAGCAATGCAATAGCCAGCCCTGGAAGCCCCA...TATATTGTCGTGTGGGTGTGTGTCTGCACCCACATCCTCACACATTGATCTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TTGGAGGCTTTGGGTTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTTGGGGCTTCCAGGGCTaGCTATTGCATTGCTATGAA +
Preference number: 4 (lower is better)
Translates to: LEALGFCSFHLPRGIQVLWGFQG*LLHCYE
Trigger: TTCATAGCAATGCAATAGCCAGCCCTGGAAGCCCCA...AAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAACCCAAAGCCTCCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp AGGTGCCTTGGGTCTGAGATACTTTCAAGCAAACAAGTTCTTCCACTTGATGTCCTGGCATGGAGTACTTaGAGAAGTCGGGCAGAGTGT +
Preference number: 4 (lower is better)
Translates to: RCLGSEILSSKQVLPLDVLAWST*RSRAEC
Trigger: ACACTCTGCCCGACTTCTCCAAGTACTCCATGCCAG...GACATCAAGTGGAAGAACTTGTTTGCTTGAAAGTATCTCAGACCCAAGGCACCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp GTTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTCTCCTCCATCTTTCTCCGGGCTGTTGTCTaGCATGGAGTACTTGGAGAA +
Preference number: 4 (lower is better)
Translates to: VFAVSIYPGESKFFSSIFLRAVV*HGVLGE
Trigger: TTCTCCAAGTACTCCATGCCAGACAACAGCCCGGAG...AAAGATGGAGGAGAAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp GTTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTCTCCTCCATCTTTCATGATGGTTGGAGGTaGCGAAGACACCTTCATGGC +
Preference number: 4 (lower is better)
Translates to: VFAVSIYPGESKFFSSIFHDGWR*RRHLHG
Trigger: GCCATGAAGGTGTCTTCGCCACCTCCAACCATCATG...AAAGATGGAGGAGAAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp AGGTGCCTTGGGTCTGAGATACTTTCAAGCAAACAAGTTCTTCCACTTGATGTCCATGATGGTTGGAGGTaGCGAAGACACCTTCATGGC +
Preference number: 4 (lower is better)
Translates to: RCLGSEILSSKQVLPLDVHDGWR*RRHLHG
Trigger: GCCATGAAGGTGTCTTCGCCACCTCCAACCATCATG...GACATCAAGTGGAAGAACTTGTTTGCTTGAAAGTATCTCAGACCCAAGGCACCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp GTTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTCTCCTCCATCTTTCTGCTGCATGATGGTTaGAGGTGGCGAAGACACCTT +
Preference number: 4 (lower is better)
Translates to: VFAVSIYPGESKFFSSIFLLHDG*RWRRHL
Trigger: AAGGTGTCTTCGCCACCTCCAACCATCATGCAGCAG...AAAGATGGAGGAGAAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TTGGGTTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTCTCCTCCATCCAAAGTCCTCCTTCTaGGTTCAAGAGTGGTCAGGA +
Preference number: 4 (lower is better)
Translates to: LGFCSFHLPRGIQVLLLHPKSSF*VQEWSG
Trigger: TCCTGACCACTCTTGAACCCAGAAGGAGGACTTTGG...ATGGAGGAGAAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAACCCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TTGGAGGCTTTGGGTTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTTCTCTCCTCCGAAATTaGCCCAAAGTCCTCCTTCTG +
Preference number: 4 (lower is better)
Translates to: LEALGFCSFHLPRGIQVLSLLRN*PKVLLL
Trigger: CAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGAGA...AAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAACCCAAAGCCTCCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp ACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTGTTAGGTGGACCTaGTTAGTTTTGGAGGCTTTG +
Preference number: 4 (lower is better)
Translates to: TFFSPPKLAQSPPSGFKSGVRWT*LVLEAL
Trigger: CAAAGCCTCCAAAACTAACCAGGTCCACCTAACACC...ACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp ATGTCCAGGATAAGGAGCATACACCAGGATTTATACACGGTGGCAGCGGCTATAGGTGTTAGGTGGACCTaGTTAGTTTTGGAGGCTTTG +
Preference number: 4 (lower is better)
Translates to: MSRIRSIHQDLYTVAAAIGVRWT*LVLEAL
Trigger: CAAAGCCTCCAAAACTAACCAGGTCCACCTAACACC...TATAGCCGCTGCCACCGTGTATAAATCCTGGTGTATGCTCCTTATCCTGGACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTCTCCTCCATCTTTCCACGGTGGCTCTGTTTaGTTTGACAACCTACCCCAC +
Preference number: 4 (lower is better)
Translates to: FLQFPSTQGNPSSSPPSFHGGSV*FDNLPH
Trigger: GTGGGGTAGGTTGTCAAACCAAACAGAGCCACCGTG...GAAAGATGGAGGAGAAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TTGATTTCCCCTTGCAAAGCAGTTGAGTTAGGGAGACAGAGCTTTTCCATTCCCGTGTCTACAAACACATaGGACAAGGACAAGCCGAGC +
Preference number: 4 (lower is better)
Translates to: LISPCKAVELGRQSFSIPVSTNT*DKDKPS
Trigger: GCTCGGCTTGTCCTTGTCCCATGTGTTTGTAGACAC...GGGAATGGAAAAGCTCTGTCTCCCTAACTCAACTGCTTTGCAAGGGGAAATCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp ATGCGCACACACGTCCTGTGTTACCACTGGCCAAGGAAACGCGAGTCTCAGGATGTGAATTTTCCATTCTaGCTTAGAGTCCTTAAATGG +
Preference number: 4 (lower is better)
Translates to: MRTHVLCYHWPRKRESQDVNFPF*LRVLKW
Trigger: CCATTTAAGGACTCTAAGCCAGAATGGAAAATTCAC...ATCCTGAGACTCGCGTTTCCTTGGCCAGTGGTAACACAGGACGTGTGTGCGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp GGGGAAGACACCCCGAGCTCAACAGCTGCCTGTTCTGACAGATCTCTTCCTATGGTGAATTTTCCATTCTaGCTTAGAGTCCTTAAATGG +
Preference number: 4 (lower is better)
Translates to: GEDTPSSTAACSDRSLPMVNFPF*LRVLKW
Trigger: CCATTTAAGGACTCTAAGCCAGAATGGAAAATTCAC...CATAGGAAGAGATCTGTCAGAACAGGCAGCTGTTGAGCTCGGGGTGTCTTCCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TCTCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGAAAAAGGATAGGAATTaGTTTATCCCCAAGGAAGGC +
Preference number: 4 (lower is better)
Translates to: SLLRNWPKVLLLGSRVVRKKDRN*FIPKEG
Trigger: GCCTTCCTTGGGGATAAACCAATTCCTATCCTTTTT...CCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp CCATTCTGGCTTAGAGTCCTTAAATGGTGGTCAGGTGTTTTCCCAACTGTCCAGACTTTGGAGGGACTTTaGTCACCAGGCACAAGGTTT +
Preference number: 4 (lower is better)
Translates to: PFWLRVLKWWSGVFPTVQTLEGL*SPGTRF
Trigger: AAACCTTGTGCCTGGTGACCAAAGTCCCTCCAAAGT...CTGGACAGTTGGGAAAACACCTGACCACCATTTAAGGACTCTAAGCCAGAATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TTCCTTCGCAGGTCCCCTCTCCATTGTTTTCTCGCCCAATCCTTCCCTCTTGCTATCTTGGAAGATAATTaGGGTTTGCTAGGGAATGAG +
Preference number: 4 (lower is better)
Translates to: FLRRSPLHCFLAQSFPLAILEDN*GLLGNE
Trigger: CTCATTCCCTAGCAAACCCCAATTATCTTCCAAGAT...AGCAAGAGGGAAGGATTGGGCGAGAAAACAATGGAGAGGGGACCTGCGAAGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTCTCCTCCATCTTTCCAGACAGCGCTCTCCTaGCTGACACACAGATTCAAC +
Preference number: 4 (lower is better)
Translates to: FLQFPSTQGNPSSSPPSFQTALS*LTHRFN
Trigger: GTTGAATCTGTGTGTCAGCCAGGAGAGCGCTGTCTG...GAAAGATGGAGGAGAAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TTGGAGGCTTTGGGTTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTGACGCTCAGATGACATaGGTCAAAGGCCTTTCCCAA +
Preference number: 4 (lower is better)
Translates to: LEALGFCSFHLPRGIQVLDAQMT*VKGLSQ
Trigger: TTGGGAAAGGCCTTTGACCCATGTCATCTGAGCGTC...AAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAACCCAAAGCCTCCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TCTAGATCAATGTGTGAGGATGTGGGTGCAGACACACACCCACACGACAATATAGACTCCCCTCACTGCTaGGCGACATTGAATTTGAAG +
Preference number: 4 (lower is better)
Translates to: SRSMCEDVGADTHPHDNIDSPHC*ATLNLK
Trigger: CTTCAAATTCAATGTCGCCCAGCAGTGAGGGGAGTC...TATATTGTCGTGTGGGTGTGTGTCTGCACCCACATCCTCACACATTGATCTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp GAAATCTTTGGCAAGAATATACTGCAGTGCGGAGTGTTGTGTGTGCGTAGGTGTGACTCCCCTCACTGCTaGGCGACATTGAATTTGAAG +
Preference number: 4 (lower is better)
Translates to: EIFGKNILQCGVLCVRRCDSPHC*ATLNLK
Trigger: CTTCAAATTCAATGTCGCCCAGCAGTGAGGGGAGTC...ACACCTACGCACACACAACACTCCGCACTGCAGTATATTCTTGCCAAAGATTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp GGACAGGAGCCCCAACATGAAGTTCTCAGTGCAAAGCTTTGGATTCTGGCTTGGTCAGGAATTTCCTCCTaGTATCTAACCCTCATCCTT +
Preference number: 4 (lower is better)
Translates to: GQEPQHEVLSAKLWILAWSGISS*YLTLIL
Trigger: AAGGATGAGGGTTAGATACCAGGAGGAAATTCCTGA...CCAAGCCAGAATCCAAAGCTTTGCACTGAGAACTTCATGTTGGGGCTCCTGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310858.10
CDS-3UTR CCA 90 bp GGACAGGAGCCCCAACATGAAGTTCTCAGTGCAAAGCTTTGGATTCTGGCTTGGCTTTGGATTCTGGCTTaGCAACTTGACATTTTGGAG +
Preference number: 4 (lower is better)
Translates to: GQEPQHEVLSAKLWILAWLWILA*QLDILE
Trigger: CTCCAAAATGTCAAGTTGCCAAGCCAGAATCCAAAG...CCAAGCCAGAATCCAAAGCTTTGCACTGAGAACTTCATGTTGGGGCTCCTGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310858.10
CDS-3UTR CCA 90 bp GGACAGGAGCCCCAACATGAAGTTCTCAGTGCAAAGCTTTGGATTCTGGCTTGGTCCATTCTCAGCAAATaGAAGGCAGAACAGATGACA +
Preference number: 4 (lower is better)
Translates to: GQEPQHEVLSAKLWILAWSILSK*KAEQMT
Trigger: TGTCATCTGTTCTGCCTTCCATTTGCTGAGAATGGA...CCAAGCCAGAATCCAAAGCTTTGCACTGAGAACTTCATGTTGGGGCTCCTGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310858.10
CDS-3UTR TCA 90 bp AGATCTAGATCAATGTGTGAGGATGTGGGTGCAGACACACACCCACACGACAATCCAGCATCAGCATATTaGGTGTTTCGATGGACTGTT +
Preference number: 4 (lower is better)
Translates to: RSRSMCEDVGADTHPHDNPASAY*VFRWTV
Trigger: AACAGTCCATCGAAACACTCAATATGCTGATGCTGG...ATTGTCGTGTGGGTGTGTGTCTGCACCCACATCCTCACACATTGATCTAGATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp GTTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTCTCCTCCATCTTTCTGATAGTCATAAGGTaGGTAAGACCTGCCAGGAGG +
Preference number: 4 (lower is better)
Translates to: VFAVSIYPGESKFFSSIFLIVIR*VRPARR
Trigger: CCTCCTGGCAGGTCTTACTCACCTTATGACTATCAG...AAAGATGGAGGAGAAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp ATTTACAAAGGAAGGGGATGGGAAATATCTCCTATCTTGGAAGATAATTGGGGTCGGGAAACTCCCCACTaGAGTGCTGTCAGCACTGAG +
Preference number: 4 (lower is better)
Translates to: IYKGRGWEISPILEDNWGRETPH*SAVSTE
Trigger: CTCAGTGCTGACAGCACTTCAGTGGGGAGTTTCCCG...ACCCCAATTATCTTCCAAGATAGGAGATATTTCCCATCCCCTTCCTTTGTAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp ATTTACAAAGGAAGGGGATGGGAAATATCTCCTATCTTGGAAGATAATTGGGGTGGTCTCGGTTTGGAATaGCCAGCTTGCAAGGCAGGG +
Preference number: 4 (lower is better)
Translates to: IYKGRGWEISPILEDNWGGLGLE*PACKAG
Trigger: CCCTGCCTTGCAAGCTGGTCATTCCAAACCGAGACC...ACCCCAATTATCTTCCAAGATAGGAGATATTTCCCATCCCCTTCCTTTGTAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp CTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCATAGAATGGAGTCCTGGTaGATTTTCCATTCTGGCTTA +
Preference number: 4 (lower is better)
Translates to: LRNWPKVLLLGSRVVRIHRMESW*IFHSGL
Trigger: TAAGCCAGAATGGAAAATTCACCAGGACTCCATTCT...ATGAATCCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp TTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTCTCCTCCATCTTTCTCCTTTCCAACTCCCTaGAACAGAACGTCCACACTG +
Preference number: 4 (lower is better)
Translates to: FLQFPSTQGNPSSSPPSFSFPTP*NRTSTL
Trigger: CAGTGTGGACGTTCTGTTTCAGGGAGTTGGAAAGGA...GAAAGATGGAGGAGAAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp ACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTCACTACATTCTTTGGTaGATTCTCAGTGGTGATGGG +
Preference number: 4 (lower is better)
Translates to: TFFSPPKLAQSPPSGFKSHYILW*ILSGDG
Trigger: CCCATCACCACTGAGAATGCACCAAAGAATGTAGTG...ACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp ATGTCCAGGATAAGGAGCATACACCAGGATTTATACACGGTGGCAGCGGCTATACACTACATTCTTTGGTaGATTCTCAGTGGTGATGGG +
Preference number: 4 (lower is better)
Translates to: MSRIRSIHQDLYTVAAAIHYILW*ILSGDG
Trigger: CCCATCACCACTGAGAATGCACCAAAGAATGTAGTG...TATAGCCGCTGCCACCGTGTATAAATCCTGGTGTATGCTCCTTATCCTGGACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp TTGATTTCCCCTTGCAAAGCAGTTGAGTTAGGGAGACAGAGCTTTTCCATTCCCGACATTGTGAGGGTCTaGATTGAGCCATGTGTCCAT +
Preference number: 4 (lower is better)
Translates to: LISPCKAVELGRQSFSIPDIVRV*IEPCVH
Trigger: ATGGACACATGGCTCAATGCAGACCCTCACAATGTC...GGGAATGGAAAAGCTCTGTCTCCCTAACTCAACTGCTTTGCAAGGGGAAATCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp TTGGAGGCTTTGGGTTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTCACTGGCAGAAATGTTaGTGTAGTGCATGTAAGCCG +
Preference number: 4 (lower is better)
Translates to: LEALGFCSFHLPRGIQVLHWQKC*CSACKP
Trigger: CGGCTTACATGCACTACAGCAACATTTCTGCCAGTG...AAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAACCCAAAGCCTCCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp TTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTCTCCTCCATCTTTCATAGAACCGCTTCATTaGAAACCGGTCCAGAGCCTG +
Preference number: 4 (lower is better)
Translates to: FLQFPSTQGNPSSSPPSFIEPLH*KPVQSL
Trigger: CAGGCTCTGGACCGGTTTGCAATGAAGCGGTTCTAT...GAAAGATGGAGGAGAAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp AGGTGCCTTGGGTCTGAGATACTTTCAAGCAAACAAGTTCTTCCACTTGATGTCATAGAACCGCTTCATTaGAAACCGGTCCAGAGCCTG +
Preference number: 4 (lower is better)
Translates to: RCLGSEILSSKQVLPLDVIEPLH*KPVQSL
Trigger: CAGGCTCTGGACCGGTTTGCAATGAAGCGGTTCTAT...GACATCAAGTGGAAGAACTTGTTTGCTTGAAAGTATCTCAGACCCAAGGCACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp TTGGAGGCTTTGGGTTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTTGCATGATCACGTGGTaGAGAAACAAGGGCTTGTTG +
Preference number: 4 (lower is better)
Translates to: LEALGFCSFHLPRGIQVLCMITW*RNKGLL
Trigger: CAACAAGCCCTTGTTTCTGCACCACGTGATCATGCA...AAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAACCCAAAGCCTCCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp TTGGGTTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTCTCCTCCATTGCATGATCACGTGGTaGAGAAACAAGGGCTTGTTG +
Preference number: 4 (lower is better)
Translates to: LGFCSFHLPRGIQVLLLHCMITW*RNKGLL
Trigger: CAACAAGCCCTTGTTTCTGCACCACGTGATCATGCA...ATGGAGGAGAAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAACCCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp TTGATTTCCCCTTGCAAAGCAGTTGAGTTAGGGAGACAGAGCTTTTCCATTCCCTGCATGATCACGTGGTaGAGAAACAAGGGCTTGTTG +
Preference number: 4 (lower is better)
Translates to: LISPCKAVELGRQSFSIPCMITW*RNKGLL
Trigger: CAACAAGCCCTTGTTTCTGCACCACGTGATCATGCA...GGGAATGGAAAAGCTCTGTCTCCCTAACTCAACTGCTTTGCAAGGGGAAATCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp ATGTCCAGGATAAGGAGCATACACCAGGATTTATACACGGTGGCAGCGGCTATACTGGGATGTTGTAGATaGCAGATGTGTACACAGGTT +
Preference number: 4 (lower is better)
Translates to: MSRIRSIHQDLYTVAAAILGCCR*QMCTQV
Trigger: AACCTGTGTACACATCTGGCATCTACAACATCCCAG...TATAGCCGCTGCCACCGTGTATAAATCCTGGTGTATGCTCCTTATCCTGGACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp AGGTGCCTTGGGTCTGAGATACTTTCAAGCAAACAAGTTCTTCCACTTGATGTCTCTCCAGGTGCTCCATaGCTTGAATTTTCTCTGGCC +
Preference number: 4 (lower is better)
Translates to: RCLGSEILSSKQVLPLDVSPGAP*LEFSLA
Trigger: GGCCAGAGAAAATTCAAGGCATGGAGCACCTGGAGA...GACATCAAGTGGAAGAACTTGTTTGCTTGAAAGTATCTCAGACCCAAGGCACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp ATTTACAAAGGAAGGGGATGGGAAATATCTCCTATCTTGGAAGATAATTGGGGTAGCTGGCGTGGGGTCTaGAGCCAACGTCTCAGATGT +
Preference number: 4 (lower is better)
Translates to: IYKGRGWEISPILEDNWGSWRGV*SQRLRC
Trigger: ACATCTGAGACGTTGGCTGCAGACCCCACGCCAGCT...ACCCCAATTATCTTCCAAGATAGGAGATATTTCCCATCCCCTTCCTTTGTAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp CCATTCTGGCTTAGAGTCCTTAAATGGTGGTCAGGTGTTTTCCCAACTGTCCAGAGCTTGATTTCCCCTTaGAAAGCAGTTGAGTTAGGG +
Preference number: 4 (lower is better)
Translates to: PFWLRVLKWWSGVFPTVQSLISP*KAVELG
Trigger: CCCTAACTCAACTGCTTTGCAAGGGGAAATCAAGCT...CTGGACAGTTGGGAAAACACCTGACCACCATTTAAGGACTCTAAGCCAGAATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp AGATCTAGATCAATGTGTGAGGATGTGGGTGCAGACACACACCCACACGACAATTTGGCAAGAATATACTaGAGTGCGGAGTGTTGTGTG +
Preference number: 4 (lower is better)
Translates to: RSRSMCEDVGADTHPHDNLARIY*SAECCV
Trigger: CACACAACACTCCGCACTGCAGTATATTCTTGCCAA...ATTGTCGTGTGGGTGTGTGTCTGCACCCACATCCTCACACATTGATCTAGATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp ATTTACAAAGGAAGGGGATGGGAAATATCTCCTATCTTGGAAGATAATTGGGGTCTCCCCTGGAGCCCCTaGACAGGCTCATCAGAACAA +
Preference number: 4 (lower is better)
Translates to: IYKGRGWEISPILEDNWGLPWSP*TGSSEQ
Trigger: TTGTTCTGATGAGCCTGTGCAGGGGCTCCAGGGGAG...ACCCCAATTATCTTCCAAGATAGGAGATATTTCCCATCCCCTTCCTTTGTAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp ATTTACAAAGGAAGGGGATGGGAAATATCTCCTATCTTGGAAGATAATTGGGGTGGAGAGGCCCCTTTTTaGCCACCAGAGACATGGCAG +
Preference number: 4 (lower is better)
Translates to: IYKGRGWEISPILEDNWGGEAPF*PPETWQ
Trigger: CTGCCATGTCTCTGGTGGGCAAAAAGGGGCCTCTCC...ACCCCAATTATCTTCCAAGATAGGAGATATTTCCCATCCCCTTCCTTTGTAAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000646520.1
CDS-3UTR CCA 90 bp CTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCATGTCCACTACATTCTTTaGTGCATTCTCAGTGGTGAT +
Preference number: 4 (lower is better)
Translates to: LRNWPKVLLLGSRVVRIHVHYIL*CILSGD
Trigger: ATCACCACTGAGAATGCACCAAAGAATGTAGTGGAC...ATGAATCCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp AGGTGCCTTGGGTCTGAGATACTTTCAAGCAAACAAGTTCTTCCACTTGATGTCTCCAGTACCTTGGCATaGAGCTTCGTGATGTCAGGT +
Preference number: 4 (lower is better)
Translates to: RCLGSEILSSKQVLPLDVSSTLA*SFVMSG
Trigger: ACCTGACATCACGAAGCTCCATGCCAAGGTACTGGA...GACATCAAGTGGAAGAACTTGTTTGCTTGAAAGTATCTCAGACCCAAGGCACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp ATTTACAAAGGAAGGGGATGGGAAATATCTCCTATCTTGGAAGATAATTGGGGTAACCGGTCCAGAGCCTaGTCCGCACTGGCAGAAATG +
Preference number: 4 (lower is better)
Translates to: IYKGRGWEISPILEDNWGNRSRA*SALAEM
Trigger: CATTTCTGCCAGTGCGGACCAGGCTCTGGACCGGTT...ACCCCAATTATCTTCCAAGATAGGAGATATTTCCCATCCCCTTCCTTTGTAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp AGGTGCCTTGGGTCTGAGATACTTTCAAGCAAACAAGTTCTTCCACTTGATGTCGGGATGGCTGGCCAATaGGCACAATCTTATCCTCAT +
Preference number: 4 (lower is better)
Translates to: RCLGSEILSSKQVLPLDVGMAGQ*AQSYPH
Trigger: ATGAGGATAAGATTGTGCCCATTGGCCAGCCATCCC...GACATCAAGTGGAAGAACTTGTTTGCTTGAAAGTATCTCAGACCCAAGGCACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TTGGAGGCTTTGGGTTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTCTTCTTTGGGATGGCTaGCCAATGGGCACAATCTTA +
Preference number: 4 (lower is better)
Translates to: LEALGFCSFHLPRGIQVLLLWDG*PMGTIL
Trigger: TAAGATTGTGCCCATTGGCCAGCCATCCCAAAGAAG...AAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAACCCAAAGCCTCCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TTGATTTCCCCTTGCAAAGCAGTTGAGTTAGGGAGACAGAGCTTTTCCATTCCCCTTCTTTGGGATGGCTaGCCAATGGGCACAATCTTA +
Preference number: 4 (lower is better)
Translates to: LISPCKAVELGRQSFSIPLLWDG*PMGTIL
Trigger: TAAGATTGTGCCCATTGGCCAGCCATCCCAAAGAAG...GGGAATGGAAAAGCTCTGTCTCCCTAACTCAACTGCTTTGCAAGGGGAAATCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TCTAGATCAATGTGTGAGGATGTGGGTGCAGACACACACCCACACGACAATATAGTAGATGCGGAGAAATaGCCGACATCCTCCTTTAGA +
Preference number: 4 (lower is better)
Translates to: SRSMCEDVGADTHPHDNIVDAEK*PTSSFR
Trigger: TCTAAAGGAGGATGTCGGCCATTTCTCCGCATCTAC...TATATTGTCGTGTGGGTGTGTGTCTGCACCCACATCCTCACACATTGATCTAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp ATGTCCCACGGTGGCTCTGTTTGGTTTGACAACCTACCCCACAGGTGGCCAGAAGCCTTGAATTTTCTCTaGCCCATAAGAAAATACAAA +
Preference number: 4 (lower is better)
Translates to: MSHGGSVWFDNLPHRWPEALNFL*PIRKYK
Trigger: TTTGTATTTTCTTATGGGCCAGAGAAAATTCAAGGC...TTCTGGCCACCTGTGGGGTAGGTTGTCAAACCAAACAGAGCCACCGTGGGACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTCTCCTCCATCTTTCGCTGGGCTCTTTGAATaGAAATCCTGGTTAGGCCCA +
Preference number: 4 (lower is better)
Translates to: FLQFPSTQGNPSSSPPSFAGLFE*KSWLGP
Trigger: TGGGCCTAACCAGGATTTCCATTCAAAGAGCCCAGC...GAAAGATGGAGGAGAAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp ATTTACAAAGGAAGGGGATGGGAAATATCTCCTATCTTGGAAGATAATTGGGGTTCAAACTGGGACTGCTaGGGGCAGCCATGCTGGGAT +
Preference number: 4 (lower is better)
Translates to: IYKGRGWEISPILEDNWGSNWDC*GQPCWD
Trigger: ATCCCAGCATGGCTGCCCCCAGCAGTCCCAGTTTGA...ACCCCAATTATCTTCCAAGATAGGAGATATTTCCCATCCCCTTCCTTTGTAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp GCAATTCACTTCCCTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCTACTTAGAAGTGTCCTaGACAAACTTCACTTTAGCC +
Preference number: 4 (lower is better)
Translates to: AIHFPLPTLHFLLSSEIGYLEVS*TNFTLA
Trigger: GGCTAAAGTGAAGTTTGTCCAGGACACTTCTAAGTA...GCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGGGAAGTGAATTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp AGGTGCCTTGGGTCTGAGATACTTTCAAGCAAACAAGTTCTTCCACTTGATGTCAGGGTTCATCTCTTTTaGCCGGCATTCAGCATGACC +
Preference number: 4 (lower is better)
Translates to: RCLGSEILSSKQVLPLDVRVHLF*PAFSMT
Trigger: GGTCATGCTGAATGCCGGCCAAAAGAGATGAACCCT...GACATCAAGTGGAAGAACTTGTTTGCTTGAAAGTATCTCAGACCCAAGGCACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp GTTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTCTCCTCCATCTTTTCTCTCCTCCGAAATTaGCCCAAAGTCCTCCTTCTG +
Preference number: 4 (lower is better)
Translates to: VFAVSIYPGESKFFSSIFSLLRN*PKVLLL
Trigger: CAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGAGA...AAAGATGGAGGAGAAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp GAAATCTTTGGCAAGAATATACTGCAGTGCGGAGTGTTGTGTGTGCGTAGGTGTGGTGTTAGGTGGACCTaGTTAGTTTTGGAGGCTTTG +
Preference number: 4 (lower is better)
Translates to: EIFGKNILQCGVLCVRRCGVRWT*LVLEAL
Trigger: CAAAGCCTCCAAAACTAACCAGGTCCACCTAACACC...ACACCTACGCACACACAACACTCCGCACTGCAGTATATTCTTGCCAAAGATTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TTGGAGGCTTTGGGTTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTGGTGTTAGGTGGACCTaGTTAGTTTTGGAGGCTTTG +
Preference number: 4 (lower is better)
Translates to: LEALGFCSFHLPRGIQVLGVRWT*LVLEAL
Trigger: CAAAGCCTCCAAAACTAACCAGGTCCACCTAACACC...AAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAACCCAAAGCCTCCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp AGGTGCCTTGGGTCTGAGATACTTTCAAGCAAACAAGTTCTTCCACTTGATGTCAACCTACCCCACAGGTaGCCAGAAAAAGATTCTCCC +
Preference number: 4 (lower is better)
Translates to: RCLGSEILSSKQVLPLDVNLPHR*PEKDSP
Trigger: GGGAGAATCTTTTTCTGGCCACCTGTGGGGTAGGTT...GACATCAAGTGGAAGAACTTGTTTGCTTGAAAGTATCTCAGACCCAAGGCACCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp AGGTGCCTTGGGTCTGAGATACTTTCAAGCAAACAAGTTCTTCCACTTGATGTCGTGTCTACAAACACATaGGACAAGGACAAGCCGAGC +
Preference number: 4 (lower is better)
Translates to: RCLGSEILSSKQVLPLDVVSTNT*DKDKPS
Trigger: GCTCGGCTTGTCCTTGTCCCATGTGTTTGTAGACAC...GACATCAAGTGGAAGAACTTGTTTGCTTGAAAGTATCTCAGACCCAAGGCACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TCTCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGACAGATCTCTTCCTATaGATACACATATCTCTACCT +
Preference number: 4 (lower is better)
Translates to: SLLRNWPKVLLLGSRVVRTDLFL*IHISLP
Trigger: AGGTAGAGATATGTGTATCCATAGGAAGAGATCTGT...CCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp ACCCTCCTTTCCAACTCCCTGAAACAGAACGTCCACACTGACACAGCTCCTTGGGTGAATTTTCCATTCTaGCTTAGAGTCCTTAAATGG +
Preference number: 4 (lower is better)
Translates to: TLLSNSLKQNVHTDTAPWVNFPF*LRVLKW
Trigger: CCATTTAAGGACTCTAAGCCAGAATGGAAAATTCAC...CCAAGGAGCTGTGTCAGTGTGGACGTTCTGTTTCAGGGAGTTGGAAAGGAGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp GAAATCTTTGGCAAGAATATACTGCAGTGCGGAGTGTTGTGTGTGCGTAGGTGTACTTTGGAGGGACTTTaGTCACCAGGCACAAGGTTT +
Preference number: 4 (lower is better)
Translates to: EIFGKNILQCGVLCVRRCTLEGL*SPGTRF
Trigger: AAACCTTGTGCCTGGTGACCAAAGTCCCTCCAAAGT...ACACCTACGCACACACAACACTCCGCACTGCAGTATATTCTTGCCAAAGATTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp GCAATTCACTTCCCTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCTACAAAGGAAGGGGATaGGAAATATCTCCTATCTTG +
Preference number: 4 (lower is better)
Translates to: AIHFPLPTLHFLLSSEIGYKGRG*EISPIL
Trigger: CAAGATAGGAGATATTTCCCATCCCCTTCCTTTGTA...GCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGGGAAGTGAATTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TCTAGATCAATGTGTGAGGATGTGGGTGCAGACACACACCCACACGACAATATATGTCCCTTAAGCGCCTaGCTAAATAAGAGAGCCAGA +
Preference number: 4 (lower is better)
Translates to: SRSMCEDVGADTHPHDNICPLSA*LNKRAR
Trigger: TCTGGCTCTCTTATTTAGCCAGGCGCTTAAGGGACA...TATATTGTCGTGTGGGTGTGTGTCTGCACCCACATCCTCACACATTGATCTAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp AGCCCCAACATGAAGTTCTCAGTGCAAAGCTTTGGATTCTGGCTTGGCAACTTGCAACTCTTTTTGCCTTaGTCCTCATTGCAGGCAAGA +
Preference number: 4 (lower is better)
Translates to: SPNMKFSVQSFGFWLGNLQLFLP*SSLQAR
Trigger: TCTTGCCTGCAATGAGGACCAAGGCAAAAAGAGTTG...CAAGTTGCCAAGCCAGAATCCAAAGCTTTGCACTGAGAACTTCATGTTGGGGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310858.10
CDS-3UTR TCA 90 bp AGGTGCCTTGGGTCTGAGATACTTTCAAGCAAACAAGTTCTTCCACTTGATGTCAGAACAACGACATTGTaGGGGTCTGCATTGAGCCAT +
Preference number: 4 (lower is better)
Translates to: RCLGSEILSSKQVLPLDVRTTTL*GSALSH
Trigger: ATGGCTCAATGCAGACCCTCACAATGTCGTTGTTCT...GACATCAAGTGGAAGAACTTGTTTGCTTGAAAGTATCTCAGACCCAAGGCACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp AGGTGCCTTGGGTCTGAGATACTTTCAAGCAAACAAGTTCTTCCACTTGATGTCTTTCCGGAGAGGAGCTaGAATGCTGAAGTGAGTAGT +
Preference number: 4 (lower is better)
Translates to: RCLGSEILSSKQVLPLDVFPERS*NAEVSS
Trigger: ACTACTCACTTCAGCATTTCAGCTCCTCTCCGGAAA...GACATCAAGTGGAAGAACTTGTTTGCTTGAAAGTATCTCAGACCCAAGGCACCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp GTTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTCTCCTCCATCTTTTTTCCGGAGAGGAGCTaGAATGCTGAAGTGAGTAGT +
Preference number: 4 (lower is better)
Translates to: VFAVSIYPGESKFFSSIFFPERS*NAEVSS
Trigger: ACTACTCACTTCAGCATTTCAGCTCCTCTCCGGAAA...AAAGATGGAGGAGAAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAAC
46% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp ATTTACAAAGGAAGGGGATGGGAAATATCTCCTATCTTGGAAGATAATTGGGGTGGACCCATCATCTGGTaGTGGCTCAAACTGGGACTG +
Preference number: 4 (lower is better)
Translates to: IYKGRGWEISPILEDNWGGPIIW*WLKLGL
Trigger: CAGTCCCAGTTTGAGCCATCACCAGATGATGGGTCC...ACCCCAATTATCTTCCAAGATAGGAGATATTTCCCATCCCCTTCCTTTGTAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp GTTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTCTCCTCCATCTTTCTATCAGAAAATGCCTaGCCAGCTCATGGGTCATGT +
Preference number: 4 (lower is better)
Translates to: VFAVSIYPGESKFFSSIFLSENA*PAHGSC
Trigger: ACATGACCCATGAGCTGGTCAGGCATTTTCTGATAG...AAAGATGGAGGAGAAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp TTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTCTCCTCCATCTTTCCTATCAGAAAATGCCTaGCCAGCTCATGGGTCATGT +
Preference number: 4 (lower is better)
Translates to: FLQFPSTQGNPSSSPPSFLSENA*PAHGSC
Trigger: ACATGACCCATGAGCTGGTCAGGCATTTTCTGATAG...GAAAGATGGAGGAGAAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp ACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTAGAATGGAGTCCTGGTaGATTTTCCATTCTGGCTTA +
Preference number: 4 (lower is better)
Translates to: TFFSPPKLAQSPPSGFKSRMESW*IFHSGL
Trigger: TAAGCCAGAATGGAAAATTCACCAGGACTCCATTCT...ACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp ATTTACAAAGGAAGGGGATGGGAAATATCTCCTATCTTGGAAGATAATTGGGGTATTGGGTGTCTGCCTTaGCTCACAGGATCTCCCCAG +
Preference number: 4 (lower is better)
Translates to: IYKGRGWEISPILEDNWGIGCLP*LTGSPQ
Trigger: CTGGGGAGATCCTGTGAGTCAAGGCAGACACCCAAT...ACCCCAATTATCTTCCAAGATAGGAGATATTTCCCATCCCCTTCCTTTGTAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp TCTAGATCAATGTGTGAGGATGTGGGTGCAGACACACACCCACACGACAATATACACTACATTCTTTGGTaGATTCTCAGTGGTGATGGG +
Preference number: 4 (lower is better)
Translates to: SRSMCEDVGADTHPHDNIHYILW*ILSGDG
Trigger: CCCATCACCACTGAGAATGCACCAAAGAATGTAGTG...TATATTGTCGTGTGGGTGTGTGTCTGCACCCACATCCTCACACATTGATCTAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp AGGTGCCTTGGGTCTGAGATACTTTCAAGCAAACAAGTTCTTCCACTTGATGTCGACATTGTGAGGGTCTaGATTGAGCCATGTGTCCAT +
Preference number: 4 (lower is better)
Translates to: RCLGSEILSSKQVLPLDVDIVRV*IEPCVH
Trigger: ATGGACACATGGCTCAATGCAGACCCTCACAATGTC...GACATCAAGTGGAAGAACTTGTTTGCTTGAAAGTATCTCAGACCCAAGGCACCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp GTTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTCTCCTCCATCTTTGACATTGTGAGGGTCTaGATTGAGCCATGTGTCCAT +
Preference number: 4 (lower is better)
Translates to: VFAVSIYPGESKFFSSIFDIVRV*IEPCVH
Trigger: ATGGACACATGGCTCAATGCAGACCCTCACAATGTC...AAAGATGGAGGAGAAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp TTGGGTTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTCTCCTCCATCTGGGATGTTGTAGATaGCAGATGTGTACACAGGTT +
Preference number: 4 (lower is better)
Translates to: LGFCSFHLPRGIQVLLLHLGCCR*QMCTQV
Trigger: AACCTGTGTACACATCTGGCATCTACAACATCCCAG...ATGGAGGAGAAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAACCCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp TCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATATACAAACTCCACTTTaGCATACTCTGGAAATCGAT +
Preference number: 4 (lower is better)
Translates to: SPPKLAQSPPSGFKSGQDIQTPL*HTLEID
Trigger: ATCGATTTCCAGAGTATGGCAAAGTGGAGTTTGTAT...ATCCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp GTTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTCTCCTCCATCTTTGAGGCTTTGGGTTTTTaGAGTTTCCATCTACCCAGG +
Preference number: 4 (lower is better)
Translates to: VFAVSIYPGESKFFSSIFEALGF*SFHLPR
Trigger: CCTGGGTAGATGGAAACTGCAAAAACCCAAAGCCTC...AAAGATGGAGGAGAAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp TCTAGATCAATGTGTGAGGATGTGGGTGCAGACACACACCCACACGACAATATAAGCTTGATTTCCCCTTaGAAAGCAGTTGAGTTAGGG +
Preference number: 4 (lower is better)
Translates to: SRSMCEDVGADTHPHDNISLISP*KAVELG
Trigger: CCCTAACTCAACTGCTTTGCAAGGGGAAATCAAGCT...TATATTGTCGTGTGGGTGTGTGTCTGCACCCACATCCTCACACATTGATCTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp TCTGCAATTCACTTCCCTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATTTATATATCAGTACAATaGCTCTCTCTAGGGGACTCG +
Preference number: 4 (lower is better)
Translates to: SAIHFPLPTLHFLLSSEIYISVQ*LSLGDS
Trigger: CGAGTCCCCTAGAGAGAGGCATTGTACTGATATATA...AATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGGGAAGTGAATTGCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp AGATCTAGATCAATGTGTGAGGATGTGGGTGCAGACACACACCCACACGACAATGTCCACTACATTCTTTaGTGCATTCTCAGTGGTGAT +
Preference number: 4 (lower is better)
Translates to: RSRSMCEDVGADTHPHDNVHYIL*CILSGD
Trigger: ATCACCACTGAGAATGCACCAAAGAATGTAGTGGAC...ATTGTCGTGTGGGTGTGTGTCTGCACCCACATCCTCACACATTGATCTAGATCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp AGGTGCCTTGGGTCTGAGATACTTTCAAGCAAACAAGTTCTTCCACTTGATGTCCTTCTTTGGGATGGCTaGCCAATGGGCACAATCTTA +
Preference number: 4 (lower is better)
Translates to: RCLGSEILSSKQVLPLDVLLWDG*PMGTIL
Trigger: TAAGATTGTGCCCATTGGCCAGCCATCCCAAAGAAG...GACATCAAGTGGAAGAACTTGTTTGCTTGAAAGTATCTCAGACCCAAGGCACCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp AGGTGCCTTGGGTCTGAGATACTTTCAAGCAAACAAGTTCTTCCACTTGATGTCGTAGATGCGGAGAAATaGCCGACATCCTCCTTTAGA +
Preference number: 4 (lower is better)
Translates to: RCLGSEILSSKQVLPLDVVDAEK*PTSSFR
Trigger: TCTAAAGGAGGATGTCGGCCATTTCTCCGCATCTAC...GACATCAAGTGGAAGAACTTGTTTGCTTGAAAGTATCTCAGACCCAAGGCACCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTCTCCTCCATCTTTCGTGACCATCCTGGTTTaGCAATTCATCGTCCAGGAT +
Preference number: 4 (lower is better)
Translates to: FLQFPSTQGNPSSSPPSFVTILV*QFIVQD
Trigger: ATCCTGGACGATGAATTGCCAAACCAGGATGGTCAC...GAAAGATGGAGGAGAAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp AGGTGCCTTGGGTCTGAGATACTTTCAAGCAAACAAGTTCTTCCACTTGATGTCGTGACCATCCTGGTTTaGCAATTCATCGTCCAGGAT +
Preference number: 4 (lower is better)
Translates to: RCLGSEILSSKQVLPLDVVTILV*QFIVQD
Trigger: ATCCTGGACGATGAATTGCCAAACCAGGATGGTCAC...GACATCAAGTGGAAGAACTTGTTTGCTTGAAAGTATCTCAGACCCAAGGCACCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp AGGTGCCTTGGGTCTGAGATACTTTCAAGCAAACAAGTTCTTCCACTTGATGTCGGTGTTAGGTGGACCTaGTTAGTTTTGGAGGCTTTG +
Preference number: 4 (lower is better)
Translates to: RCLGSEILSSKQVLPLDVGVRWT*LVLEAL
Trigger: CAAAGCCTCCAAAACTAACCAGGTCCACCTAACACC...GACATCAAGTGGAAGAACTTGTTTGCTTGAAAGTATCTCAGACCCAAGGCACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp GTTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTCTCCTCCATCTTTGGTGTTAGGTGGACCTaGTTAGTTTTGGAGGCTTTG +
Preference number: 4 (lower is better)
Translates to: VFAVSIYPGESKFFSSIFGVRWT*LVLEAL
Trigger: CAAAGCCTCCAAAACTAACCAGGTCCACCTAACACC...AAAGATGGAGGAGAAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp AGATCTAGATCAATGTGTGAGGATGTGGGTGCAGACACACACCCACACGACAATACCAACCCTAATCTTTaGACAGTATGCATGTGTGTC +
Preference number: 4 (lower is better)
Translates to: RSRSMCEDVGADTHPHDNTNPNL*TVCMCV
Trigger: GACACACATGCATACTGTCCAAAGATTAGGGTTGGT...ATTGTCGTGTGGGTGTGTGTCTGCACCCACATCCTCACACATTGATCTAGATCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp ACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTAGAGTCCTTAAATGGTaGTCAGGTGTTTTCCCAACT +
Preference number: 4 (lower is better)
Translates to: TFFSPPKLAQSPPSGFKSRVLKW*SGVFPT
Trigger: AGTTGGGAAAACACCTGACCACCATTTAAGGACTCT...ACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTCTCCTCCATCTTTCATGTCCATGACTCCCTaGCTCTTTGTTGCCCATCTT +
Preference number: 4 (lower is better)
Translates to: FLQFPSTQGNPSSSPPSFMSMTP*LFVAHL
Trigger: AAGATGGGCAACAAAGAGCCAGGGAGTCATGGACAT...GAAAGATGGAGGAGAAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp GACAGGAGCCCCAACATGAAGTTCTCAGTGCAAAGCTTTGGATTCTGGCTTGGCCAATTGACTGGCTATTaGTATTCTGTTTGTTCCCAT +
Preference number: 4 (lower is better)
Translates to: DRSPNMKFSVQSFGFWLGQLTGY*YSVCSH
Trigger: ATGGGAACAAACAGAATACCAATAGCCAGTCAATTG...GCCAAGCCAGAATCCAAAGCTTTGCACTGAGAACTTCATGTTGGGGCTCCTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310858.10
CDS-3UTR CCA 90 bp GACAGGAGCCCCAACATGAAGTTCTCAGTGCAAAGCTTTGGATTCTGGCTTGGCATGCTTCCAATTGACTaGCTATTGGTATTCTGTTTG +
Preference number: 4 (lower is better)
Translates to: DRSPNMKFSVQSFGFWLGMLPID*LLVFCL
Trigger: CAAACAGAATACCAATAGCCAGTCAATTGGAAGCAT...GCCAAGCCAGAATCCAAAGCTTTGCACTGAGAACTTCATGTTGGGGCTCCTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310858.10
CDS-3UTR TCA 90 bp AGCCCCAACATGAAGTTCTCAGTGCAAAGCTTTGGATTCTGGCTTGGCAACTTGGAAATCGATCATCTTTaGAAGCATCATCAAGGTCCT +
Preference number: 4 (lower is better)
Translates to: SPNMKFSVQSFGFWLGNLEIDHL*KHHQGP
Trigger: AGGACCTTGATGATGCTTTCAAAGATGATCGATTTC...CAAGTTGCCAAGCCAGAATCCAAAGCTTTGCACTGAGAACTTCATGTTGGGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310858.10
CDS-3UTR TCA 90 bp GTTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTCTCCTCCATCTTTCCAGCATCAGCATATTaGGTGTTTCGATGGACTGTT +
Preference number: 4 (lower is better)
Translates to: VFAVSIYPGESKFFSSIFPASAY*VFRWTV
Trigger: AACAGTCCATCGAAACACTCAATATGCTGATGCTGG...AAAGATGGAGGAGAAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp TTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTCTCCTCCATCTTTCAACATTTTGGACATTTaGGGACAGAGGTGCCAAGAG +
Preference number: 4 (lower is better)
Translates to: FLQFPSTQGNPSSSPPSFNILDI*GQRCQE
Trigger: CTCTTGGCACCTCTGTCCTCAAATGTCCAAAATGTT...GAAAGATGGAGGAGAAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp GTTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTCTCCTCCATCTTTAACATTTTGGACATTTaGGGACAGAGGTGCCAAGAG +
Preference number: 4 (lower is better)
Translates to: VFAVSIYPGESKFFSSIFNILDI*GQRCQE
Trigger: CTCTTGGCACCTCTGTCCTCAAATGTCCAAAATGTT...AAAGATGGAGGAGAAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp AGCCCCAACATGAAGTTCTCAGTGCAAAGCTTTGGATTCTGGCTTGGCAACTTGCAATTTTCCAGCTGCTaGACAATAAGGTGGAAATCT +
Preference number: 4 (lower is better)
Translates to: SPNMKFSVQSFGFWLGNLQFSSC*TIRWKS
Trigger: AGATTTCCACCTTATTGTTCAGCAGCTGGAAAATTG...CAAGTTGCCAAGCCAGAATCCAAAGCTTTGCACTGAGAACTTCATGTTGGGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310858.10
CDS-3UTR GCA 90 bp CTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCATATACAAACTCCACTTTaGCATACTCTGGAAATCGAT +
Preference number: 4 (lower is better)
Translates to: LRNWPKVLLLGSRVVRIHIQTPL*HTLEID
Trigger: ATCGATTTCCAGAGTATGGCAAAGTGGAGTTTGTAT...ATGAATCCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp ATTTACAAAGGAAGGGGATGGGAAATATCTCCTATCTTGGAAGATAATTGGGGTGGCTGGCTATTGCATTaGTATGAAGACCGGAGGCCA +
Preference number: 4 (lower is better)
Translates to: IYKGRGWEISPILEDNWGGWLLH*YEDRRP
Trigger: TGGCCTCCGGTCTTCATAGCAATGCAATAGCCAGCC...ACCCCAATTATCTTCCAAGATAGGAGATATTTCCCATCCCCTTCCTTTGTAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp AGGTGCCTTGGGTCTGAGATACTTTCAAGCAAACAAGTTCTTCCACTTGATGTCAGCTTGATTTCCCCTTaGAAAGCAGTTGAGTTAGGG +
Preference number: 4 (lower is better)
Translates to: RCLGSEILSSKQVLPLDVSLISP*KAVELG
Trigger: CCCTAACTCAACTGCTTTGCAAGGGGAAATCAAGCT...GACATCAAGTGGAAGAACTTGTTTGCTTGAAAGTATCTCAGACCCAAGGCACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TCTAGATCAATGTGTGAGGATGTGGGTGCAGACACACACCCACACGACAATATATTTGAATGGAAATCCTaGTTAGGCCCAGCCAAACAT +
Preference number: 4 (lower is better)
Translates to: SRSMCEDVGADTHPHDNIFEWKS*LGPAKH
Trigger: ATGTTTGGCTGGGCCTAACCAGGATTTCCATTCAAA...TATATTGTCGTGTGGGTGTGTGTCTGCACCCACATCCTCACACATTGATCTAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TTGATTTCCCCTTGCAAAGCAGTTGAGTTAGGGAGACAGAGCTTTTCCATTCCCTTTGAATGGAAATCCTaGTTAGGCCCAGCCAAACAT +
Preference number: 4 (lower is better)
Translates to: LISPCKAVELGRQSFSIPFEWKS*LGPAKH
Trigger: ATGTTTGGCTGGGCCTAACCAGGATTTCCATTCAAA...GGGAATGGAAAAGCTCTGTCTCCCTAACTCAACTGCTTTGCAAGGGGAAATCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TCTGCAATTCACTTCCCTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATTTACTTAGAAGTGTCCTaGACAAACTTCACTTTAGCC +
Preference number: 4 (lower is better)
Translates to: SAIHFPLPTLHFLLSSEIYLEVS*TNFTLA
Trigger: GGCTAAAGTGAAGTTTGTCCAGGACACTTCTAAGTA...AATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGGGAAGTGAATTGCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TCTAGATCAATGTGTGAGGATGTGGGTGCAGACACACACCCACACGACAATATAACCAACCCTAATCTTTaGACAGTATGCATGTGTGTC +
Preference number: 4 (lower is better)
Translates to: SRSMCEDVGADTHPHDNITNPNL*TVCMCV
Trigger: GACACACATGCATACTGTCCAAAGATTAGGGTTGGT...TATATTGTCGTGTGGGTGTGTGTCTGCACCCACATCCTCACACATTGATCTAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TCTAGATCAATGTGTGAGGATGTGGGTGCAGACACACACCCACACGACAATATACTTAGAGTCCTTAAATaGTGGTCAGGTGTTTTCCCA +
Preference number: 4 (lower is better)
Translates to: SRSMCEDVGADTHPHDNILRVLK*WSGVFP
Trigger: TGGGAAAACACCTGACCACCATTTAAGGACTCTAAG...TATATTGTCGTGTGGGTGTGTGTCTGCACCCACATCCTCACACATTGATCTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp CTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCATGTGAATTTTCCATTCTaGCTTAGAGTCCTTAAATGG +
Preference number: 4 (lower is better)
Translates to: LRNWPKVLLLGSRVVRIHVNFPF*LRVLKW
Trigger: CCATTTAAGGACTCTAAGCCAGAATGGAAAATTCAC...ATGAATCCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000646520.1
ENST00000651849.1
3UTR CAA 72 bp AGTTTCAAACAGCTTAACACTGATTGGAAAACAAGCTaGGGACATCCCTCTACAGTAACTCCACTGCTGGCA +
Preference number: 4 (lower is better)
Translates to: SFKQLNTDWKTS*GHPSTVTPLLA
Trigger: TGCCAGCAGTGGAGTTACTGTAGAGGGATGTCCCAAGCTTGTTTTCCAATCAGTGTTAAGCTGTTTGAAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp AGCCCCAACATGAAGTTCTCAGTGCAAAGCTTTGGATTCTGGCTTGGCAACTTGATACAAACTCCACTTTaGCATACTCTGGAAATCGAT +
Preference number: 4 (lower is better)
Translates to: SPNMKFSVQSFGFWLGNLIQTPL*HTLEID
Trigger: ATCGATTTCCAGAGTATGGCAAAGTGGAGTTTGTAT...CAAGTTGCCAAGCCAGAATCCAAAGCTTTGCACTGAGAACTTCATGTTGGGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310858.10
CDS-3UTR GCA 90 bp AGATCTAGATCAATGTGTGAGGATGTGGGTGCAGACACACACCCACACGACAATAATCTTTGGACAGTATaGATGTGTGTCTACAAACAC +
Preference number: 4 (lower is better)
Translates to: RSRSMCEDVGADTHPHDNNLWTV*MCVYKH
Trigger: GTGTTTGTAGACACACATGCATACTGTCCAAAGATT...ATTGTCGTGTGGGTGTGTGTCTGCACCCACATCCTCACACATTGATCTAGATCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTCTCCTCCATCTTTCGTCCACTACATTCTTTaGTGCATTCTCAGTGGTGAT +
Preference number: 4 (lower is better)
Translates to: FLQFPSTQGNPSSSPPSFVHYIL*CILSGD
Trigger: ATCACCACTGAGAATGCACCAAAGAATGTAGTGGAC...GAAAGATGGAGGAGAAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp AGGTGCCTTGGGTCTGAGATACTTTCAAGCAAACAAGTTCTTCCACTTGATGTCGTCCACTACATTCTTTaGTGCATTCTCAGTGGTGAT +
Preference number: 4 (lower is better)
Translates to: RCLGSEILSSKQVLPLDVVHYIL*CILSGD
Trigger: ATCACCACTGAGAATGCACCAAAGAATGTAGTGGAC...GACATCAAGTGGAAGAACTTGTTTGCTTGAAAGTATCTCAGACCCAAGGCACCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TCCCCAGCACAACGACCAATTAGGCTGGCAGCCACTGAAACCTCAGAACAAATTGCCTTGAATTTTCTCTaGCCCATAAGAAAATACAAA +
Preference number: 4 (lower is better)
Translates to: SPAQRPIRLAATETSEQIALNFL*PIRKYK
Trigger: TTTGTATTTTCTTATGGGCCAGAGAAAATTCAAGGC...AATTTGTTCTGAGGTTTCAGTGGCTGCCAGCCTAATTGGTCGTTGTGCTGGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000453356.1
CDS-3UTR CCA 90 bp TTGGAGGCTTTGGGTTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTTACTTAGAAGTGTCCTaGACAAACTTCACTTTAGCC +
Preference number: 4 (lower is better)
Translates to: LEALGFCSFHLPRGIQVLYLEVS*TNFTLA
Trigger: GGCTAAAGTGAAGTTTGTCCAGGACACTTCTAAGTA...AAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAACCCAAAGCCTCCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp ATTTACAAAGGAAGGGGATGGGAAATATCTCCTATCTTGGAAGATAATTGGGGTTTCTGGGTTCAAGAGTaGTCAGGATTCATGGGTCCC +
Preference number: 4 (lower is better)
Translates to: IYKGRGWEISPILEDNWGFWVQE*SGFMGP
Trigger: GGGACCCATGAATCCTGACCACTCTTGAACCCAGAA...ACCCCAATTATCTTCCAAGATAGGAGATATTTCCCATCCCCTTCCTTTGTAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp AGGTGCCTTGGGTCTGAGATACTTTCAAGCAAACAAGTTCTTCCACTTGATGTCACCAACCCTAATCTTTaGACAGTATGCATGTGTGTC +
Preference number: 4 (lower is better)
Translates to: RCLGSEILSSKQVLPLDVTNPNL*TVCMCV
Trigger: GACACACATGCATACTGTCCAAAGATTAGGGTTGGT...GACATCAAGTGGAAGAACTTGTTTGCTTGAAAGTATCTCAGACCCAAGGCACCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp GATCTAGATCAATGTGTGAGGATGTGGGTGCAGACACACACCCACACGACAATAACAGATCTCTTCCTATaGATACACATATCTCTACCT +
Preference number: 4 (lower is better)
Translates to: DLDQCVRMWVQTHTHTTITDLFL*IHISLP
Trigger: AGGTAGAGATATGTGTATCCATAGGAAGAGATCTGT...TATTGTCGTGTGGGTGTGTGTCTGCACCCACATCCTCACACATTGATCTAGATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp ATTTACAAAGGAAGGGGATGGGAAATATCTCCTATCTTGGAAGATAATTGGGGTAGCTTTCAGAGCTACTaGAGGAGACGCTCAGATGAC +
Preference number: 4 (lower is better)
Translates to: IYKGRGWEISPILEDNWGSFQSY*RRRSDD
Trigger: GTCATCTGAGCGTCTCCTCCAGTAGCTCTGAAAGCT...ACCCCAATTATCTTCCAAGATAGGAGATATTTCCCATCCCCTTCCTTTGTAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp ATTTACAAAGGAAGGGGATGGGAAATATCTCCTATCTTGGAAGATAATTGGGGTGACTCCCCTCACTGCTaGGCGACATTGAATTTGAAG +
Preference number: 4 (lower is better)
Translates to: IYKGRGWEISPILEDNWGDSPHC*ATLNLK
Trigger: CTTCAAATTCAATGTCGCCCAGCAGTGAGGGGAGTC...ACCCCAATTATCTTCCAAGATAGGAGATATTTCCCATCCCCTTCCTTTGTAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR TCA 90 bp AGGTGCCTTGGGTCTGAGATACTTTCAAGCAAACAAGTTCTTCCACTTGATGTCGAAATCGATCATCTTTaGAAGCATCATCAAGGTCCT +
Preference number: 4 (lower is better)
Translates to: RCLGSEILSSKQVLPLDVEIDHL*KHHQGP
Trigger: AGGACCTTGATGATGCTTTCAAAGATGATCGATTTC...GACATCAAGTGGAAGAACTTGTTTGCTTGAAAGTATCTCAGACCCAAGGCACCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp AGCCCCAACATGAAGTTCTCAGTGCAAAGCTTTGGATTCTGGCTTGGCAACTTGGCCTTGAATTTTCTCTaGCCCATAAGAAAATACAAA +
Preference number: 4 (lower is better)
Translates to: SPNMKFSVQSFGFWLGNLALNFL*PIRKYK
Trigger: TTTGTATTTTCTTATGGGCCAGAGAAAATTCAAGGC...CAAGTTGCCAAGCCAGAATCCAAAGCTTTGCACTGAGAACTTCATGTTGGGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000310858.10
CDS-3UTR CCA 90 bp TTGGGTTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTCTCCTCCATACAGATCTCTTCCTATaGATACACATATCTCTACCT +
Preference number: 4 (lower is better)
Translates to: LGFCSFHLPRGIQVLLLHTDLFL*IHISLP
Trigger: AGGTAGAGATATGTGTATCCATAGGAAGAGATCTGT...ATGGAGGAGAAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAACCCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TTGGAGGCTTTGGGTTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTACAGATCTCTTCCTATaGATACACATATCTCTACCT +
Preference number: 4 (lower is better)
Translates to: LEALGFCSFHLPRGIQVLTDLFL*IHISLP
Trigger: AGGTAGAGATATGTGTATCCATAGGAAGAGATCTGT...AAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAACCCAAAGCCTCCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp AGGTGCCTTGGGTCTGAGATACTTTCAAGCAAACAAGTTCTTCCACTTGATGTCATACAAACTCCACTTTaGCATACTCTGGAAATCGAT +
Preference number: 4 (lower is better)
Translates to: RCLGSEILSSKQVLPLDVIQTPL*HTLEID
Trigger: ATCGATTTCCAGAGTATGGCAAAGTGGAGTTTGTAT...GACATCAAGTGGAAGAACTTGTTTGCTTGAAAGTATCTCAGACCCAAGGCACCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR GCA 90 bp TTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTCTCCTCCATCTTTCATACAAACTCCACTTTaGCATACTCTGGAAATCGAT +
Preference number: 4 (lower is better)
Translates to: FLQFPSTQGNPSSSPPSFIQTPL*HTLEID
Trigger: ATCGATTTCCAGAGTATGGCAAAGTGGAGTTTGTAT...GAAAGATGGAGGAGAAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CCA 90 bp TTGGGTTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTCTCCTCCATGCCTTGAATTTTCTCTaGCCCATAAGAAAATACAAA +
Preference number: 4 (lower is better)
Translates to: LGFCSFHLPRGIQVLLLHALNFL*PIRKYK
Trigger: TTTGTATTTTCTTATGGGCCAGAGAAAATTCAAGGC...ATGGAGGAGAAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAACCCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS CCA 90 bp TCCCAGCACTCAGCCCGCGCCGAGACCCAGGGACTCCCCGGGGGCTaGGGACCGCAGAGTGGTCCGGGCCGCAGCTCTTCGCAGCACACC +
Preference number: 5 (lower is better)
Translates to: SQHSARAETQGLPGG*GPQSGPGRSSSQHT
Trigger: GGTGTGCTGCGAAGAGCTGCGGCCCGGACCACTCTGCGGTCCCCAGCCCCCGGGGAGTCCCTGGGTCTCGGCGCGGGCTGAGTGCTGGGA
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649572.1
CDS CCA 90 bp AAGCACCAACTCAGCCGAGTCATGCTGACCCCGAGAGTGGGCGCCTaGGGCGCGAGGGTCGGAAGAGGTGGACCCGCCGCTCCTGGCGCA +
Preference number: 5 (lower is better)
Translates to: KHQLSRVMLTPRVGA*GARVGRGGPAAPGA
Trigger: TGCGCCAGGAGCGGCGGGTCCACCTCTTCCGACCCTCGCGCCCCAGGCGCCCACTCTCGGGGTCAGCATGACTCGGCTGAGTTGGTGCTT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646520.1
CDS-3UTR CAA 90 bp GTGTGCATGGGTGCACAGCCCGCCGTGACACAGAAGGGCTCTGGTGCAGGGCCCCCCGGCTCCTGGTCCTaGAGGAGCGCGATGGCCTGC +
Preference number: 5 (lower is better)
Translates to: VCMGAQPAVTQKGSGAGPPGSWS*RSAMAC
Trigger: GCAGGCCATCGCGCTCCTCAAGGACCAGGAGCCGGG...GGGCCCTGCACCAGAGCCCTTCTGTGTCACGGCGGGCTGTGCACCCATGCACAC
70% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS TCA 90 bp GGCGTCCAGAGGAGGGCACAGCCGAGCCCCCTGCTGGGCGGGACCTaGGGTGCTGGGTGTGGTACATGGCGCCTTGCTTCTCTCGCTCTA +
Preference number: 5 (lower is better)
Translates to: GVQRRAQPSPLLGGT*GAGCGTWRLASLAL
Trigger: TAGAGCGAGAGAAGCAAGGCGCCATGTACCACACCCAGCACCTCAGGTCCCGCCCAGCAGGGGGCTCGGCTGTGCCCTCCTCTGGACGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446903.5
ENST00000479185.1
ENST00000480665.1
ENST00000611415.4
ENST00000615025.5
ENST00000646520.1
ENST00000651849.1
ENST00000682258.1
CDS CCA 90 bp TGGGACAACGTGGCGTCCAGAGGAGGGCACAGCCGAGCCCCCTGCTaGGCGGGACCTGAGGTGCTGGGTGTGGTACATGGCGCCTTGCTT +
Preference number: 5 (lower is better)
Translates to: WDNVASRGGHSRAPC*AGPEVLGVVHGALL
Trigger: AAGCAAGGCGCCATGTACCACACCCAGCACCTCAGGTCCCGCCCAGCAGGGGGCTCGGCTGTGCCCTCCTCTGGACGCCACGTTGTCCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446903.5
ENST00000479185.1
ENST00000480665.1
ENST00000611415.4
ENST00000615025.5
ENST00000646520.1
ENST00000651849.1
ENST00000682258.1
CDS CCA 90 bp TTGGGCTCCCTTGCCGGAAGGCTGCGGAGTCTGGTGACGGGGAGGTaGCAGGGCTGCTCAGGCCAGGGTAGTAGGCAGGGGAGACAGGGA +
Preference number: 5 (lower is better)
Translates to: LGSLAGRLRSLVTGR*QGCSGQGSRQGRQG
Trigger: TCCCTGTCTCCCCTGCCTACTACCCTGGCCTGAGCAGCCCTGCCACCTCCCCGTCACCAGACTCCGCAGCCTTCCGGCAAGGGAGCCCAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000615025.5
ENST00000646520.1
ENST00000651849.1
ENST00000682258.1
CDS TCA 90 bp CGTCATCTTTGCTGGGTCCCGTCACTGAGGCACGCCCAGGGCCTGTaGAGAGCCCCTGAAGCTAGAGTCCCCGCGGCGCTGGCAGAAGGG +
Preference number: 5 (lower is better)
Translates to: RHLCWVPSLRHAQGL*RAPEARVPAALAEG
Trigger: CCCTTCTGCCAGCGCCGCGGGGACTCTAGCTTCAGGGGCTCTTCACAGGCCCTGGGCGTGCCTCAGTGACGGGACCCAGCAAAGATGACG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000446903.5
ENST00000682258.1
CDS TCA 90 bp CCCATCGGATCACGCAGGAGAAGCACCAACTCAGCCGAGTCATGCTaGCCCCGAGAGTGGGCGCCTGGGGCGCGAGGGTCGGAAGAGGTG +
Preference number: 5 (lower is better)
Translates to: PIGSRRRSTNSAESC*PREWAPGARGSEEV
Trigger: CACCTCTTCCGACCCTCGCGCCCCAGGCGCCCACTCTCGGGGTCAGCATGACTCGGCTGAGTTGGTGCTTCTCCTGCGTGATCCGATGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646520.1
CDS GCA 90 bp CCAGAGGAGGGCACAGCCGAGCCCCCTGCTGGGCGGGACCTGAGGTaGTGGGTGTGGTACATGGCGCCTTGCTTCTCTCGCTCTAAGCCA +
Preference number: 5 (lower is better)
Translates to: PEEGTAEPPAGRDLR*WVWYMAPCFSRSKP
Trigger: TGGCTTAGAGCGAGAGAAGCAAGGCGCCATGTACCACACCCAGCACCTCAGGTCCCGCCCAGCAGGGGGCTCGGCTGTGCCCTCCTCTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446903.5
ENST00000479185.1
ENST00000480665.1
ENST00000611415.4
ENST00000615025.5
ENST00000646520.1
ENST00000651849.1
ENST00000682258.1
CDS GCA 90 bp TGGCGTGGAGGTGGGCGAGGCTGCTGCTGCTGCTGCTGCTGCTGCTaGCACGAATTCAGTCCCCTTTGCACAGCCTCCCGGCTGCTTCCC +
Preference number: 5 (lower is better)
Translates to: WRGGGRGCCCCCCCC*HEFSPLCTASRLLP
Trigger: GGGAAGCAGCCGGGAGGCTGTGCAAAGGGGACTGAATTCGTGGCAGCAGCAGCAGCAGCAGCAGCAGCAGCCTCGCCCACCTCCACGCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000615025.5
ENST00000646520.1
ENST00000651849.1
ENST00000682258.1
CDS GCA 90 bp GGGCTGGGCCTGCTGGCTACAAGACTCTCCAAGTGGGCTCTTTCCTaGTGGCGTGGAGGTGGGCGAGGCTGCTGCTGCTGCTGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: GLGLLATRLSKWALS*WRGGGRGCCCCCCC
Trigger: GCAGCAGCAGCAGCAGCAGCAGCCTCGCCCACCTCCACGCCAGCAGGAAAGAGCCCACTTGGAGAGTCTTGTAGCCAGCAGGCCCAGCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000615025.5
ENST00000646520.1
ENST00000651849.1
ENST00000682258.1
CDS GCA 90 bp TGCTGGCGTGGAGGTGGGCGAGGCTGCTGCTGCTGCTGCTGCTGCTaGTGCCACGAATTCAGTCCCCTTTGCACAGCCTCCCGGCTGCTT +
Preference number: 5 (lower is better)
Translates to: CWRGGGRGCCCCCCC*CHEFSPLCTASRLL
Trigger: AAGCAGCCGGGAGGCTGTGCAAAGGGGACTGAATTCGTGGCAGCAGCAGCAGCAGCAGCAGCAGCAGCCTCGCCCACCTCCACGCCAGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000615025.5
ENST00000646520.1
ENST00000651849.1
ENST00000682258.1
CDS GCA 90 bp TTCCAGGGCTGGCTATTGCATTGCTATGAAGACCGGAGGCCAGGTTaGCTTGGTGAGCCCCAGGGTGCCGGCCCAGGCTGGGACTCCCCG +
Preference number: 5 (lower is better)
Translates to: FQGWLLHCYEDRRPG*LGEPQGAGPGWDSP
Trigger: CGGGGAGTCCCAGCCTGGGCCGGCACCCTGGGGCTCACCAAGGCAACCTGGCCTCCGGTCTTCATAGCAATGCAATAGCCAGCCCTGGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000615025.5
ENST00000646520.1
ENST00000651849.1
ENST00000682258.1
CDS GCA 90 bp CTTGGGCTCAGAGTCCTGAGCTCGGGGTCCAGCCACCGCTGTCCGTaGCACAGACTCCACATAGCTCCGGGGCTCTGGCTGGATCCGTCT +
Preference number: 5 (lower is better)
Translates to: LGLRVLSSGSSHRCP*HRLHIAPGLWLDPS
Trigger: AGACGGATCCAGCCAGAGCCCCGGAGCTATGTGGAGTCTGTGGCACGGACAGCGGTGGCTGGACCCCGAGCTCAGGACTCTGAGCCCAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000419504.5
ENST00000611415.4
CDS GCA 90 bp GTCTCCAAGAAGAGGAGCCCCTGCACCCCTCTCCTGGCTCCGCAGTaGCTACGAGGCAGGATAGGTGGGTTCCGAGGTCCAGCTCCCAGC +
Preference number: 5 (lower is better)
Translates to: VSKKRSPCTPLLAPQ*LRGRIGGFRGPAPS
Trigger: GCTGGGAGCTGGACCTCGGAACCCACCTATCCTGCCTCGTAGGCACTGCGGAGCCAGGAGAGGGGTGCAGGGGCTCCTCTTCTTGGAGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000439083.5
CDS CCA 90 bp TGGCACTGGAGGCCCCGGGGACAGGCTCGTCGGTCTTGTCGGTCTTaGTGGAGGCTGTGGAGTTGCCCGAGTCGCTGCTCACAGAAAGCG +
Preference number: 5 (lower is better)
Translates to: WHWRPRGQARRSCRS*WRLWSCPSRCSQKA
Trigger: CGCTTTCTGTGAGCAGCGACTCGGGCAACTCCACAGCCTCCACCAAGACCGACAAGACCGACGAGCCTGTCCCCGGGGCCTCCAGTGCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446903.5
ENST00000479185.1
ENST00000480665.1
ENST00000611415.4
ENST00000615025.5
ENST00000646520.1
ENST00000651849.1
ENST00000682258.1
CDS CCA 90 bp GGCACAGCCGAGCCCCCTGCTGGGCGGGACCTGAGGTGCTGGGTGTaGTACATGGCGCCTTGCTTCTCTCGCTCTAAGCCAAAGCCACTC +
Preference number: 5 (lower is better)
Translates to: GTAEPPAGRDLRCWV*YMAPCFSRSKPKPL
Trigger: GAGTGGCTTTGGCTTAGAGCGAGAGAAGCAAGGCGCCATGTACCACACCCAGCACCTCAGGTCCCGCCCAGCAGGGGGCTCGGCTGTGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446903.5
ENST00000479185.1
ENST00000480665.1
ENST00000611415.4
ENST00000615025.5
ENST00000646520.1
ENST00000651849.1
ENST00000682258.1
CDS CCA 90 bp GAGGAGGGCACAGCCGAGCCCCCTGCTGGGCGGGACCTGAGGTGCTaGGTGTGGTACATGGCGCCTTGCTTCTCTCGCTCTAAGCCAAAG +
Preference number: 5 (lower is better)
Translates to: EEGTAEPPAGRDLRC*VWYMAPCFSRSKPK
Trigger: CTTTGGCTTAGAGCGAGAGAAGCAAGGCGCCATGTACCACACCCAGCACCTCAGGTCCCGCCCAGCAGGGGGCTCGGCTGTGCCCTCCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446903.5
ENST00000479185.1
ENST00000480665.1
ENST00000611415.4
ENST00000615025.5
ENST00000646520.1
ENST00000651849.1
ENST00000682258.1
CDS CCA 90 bp CTGGGCCTGCTGGCTACAAGACTCTCCAAGTGGGCTCTTTCCTGCTaGCGTGGAGGTGGGCGAGGCTGCTGCTGCTGCTGCTGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: LGLLATRLSKWALSC*RGGGRGCCCCCCCC
Trigger: GCAGCAGCAGCAGCAGCAGCAGCAGCCTCGCCCACCTCCACGCCAGCAGGAAAGAGCCCACTTGGAGAGTCTTGTAGCCAGCAGGCCCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000615025.5
ENST00000646520.1
ENST00000651849.1
ENST00000682258.1
CDS CCA 90 bp TCTCCTGCTGGGAGGCTGCTCGCGGGAACTCAGGGAGACTGGGGATaGGGGTCTCTGCCAATGGCTGAGGGCTGGGCCTGCTGGCTACAA +
Preference number: 5 (lower is better)
Translates to: SPAGRLLAGTQGDWG*GSLPMAEGWACWLQ
Trigger: TTGTAGCCAGCAGGCCCAGCCCTCAGCCATTGGCAGAGACCCCCATCCCCAGTCTCCCTGAGTTCCCGCGAGCAGCCTCCCAGCAGGAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000615025.5
ENST00000646520.1
ENST00000651849.1
ENST00000682258.1
CDS CCA 90 bp CGGAAGCCAGACTCCAACAGAGGCTGGGTGGGCGTCCGGGGACCCTaGTCACTGCTCTCTCCCGACGGGAAACTCCCCACTGAAGTGCTG +
Preference number: 5 (lower is better)
Translates to: RKPDSNRGWVGVRGP*SLLSPDGKLPTEVL
Trigger: CAGCACTTCAGTGGGGAGTTTCCCGTCGGGAGAGAGCAGTGACCAGGGTCCCCGGACGCCCACCCAGCCTCTGTTGGAGTCTGGCTTCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000615025.5
ENST00000646520.1
ENST00000651849.1
ENST00000682258.1
CDS-3UTR CAA 90 bp GTGTGCATGGGTGCACAGCCCGCCGTGACACAGAAGGGCTCTGGTGCAGGGCCCACCCTGGTGGAGCCGTaGTCCTCGAGGCTTTTCCGT +
Preference number: 5 (lower is better)
Translates to: VCMGAQPAVTQKGSGAGPTLVEP*SSRLFR
Trigger: ACGGAAAAGCCTCGAGGACAACGGCTCCACCAGGGT...GGGCCCTGCACCAGAGCCCTTCTGTGTCACGGCGGGCTGTGCACCCATGCACAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp CATGGGTGCACAGCCCGCCGTGACACAGAAGGGCTCTGGTGCAGGGCCCAGAGGGCCACCTCACGGAGGTaGCTCCGGAAGTTCTCCTCA +
Preference number: 5 (lower is better)
Translates to: HGCTARRDTEGLWCRAQRATSRR*LRKFSS
Trigger: TGAGGAGAACTTCCGGAGCAACCTCCGTGAGGTGGC...CCTCTGGGCCCTGCACCAGAGCCCTTCTGTGTCACGGCGGGCTGTGCACCCATG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp GAGAAGGGTCTGGCGGCACCCAGGGTCACTAGAGTGCAGGTGCAGGCACCAGGAGCAGCCATGCTGGGATaGATGGCCCGCCAGCCGAAG +
Preference number: 5 (lower is better)
Translates to: EKGLAAPRVTRVQVQAPGAAMLG*MARQPK
Trigger: CTTCGGCTGGCGGGCCATCAATCCCAGCATGGCTGC...TCCTGGTGCCTGCACCTGCACTCTAGTGACCCTGGGTGCCGCCAGACCCTTCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp CCAAGGCAGGACAGGGCGATGCCATTGCAGACCCTCCCACTCCTGCTGGGGTCTTGGTGTTGGGCTCCCTaGCCGGAAGGCTGCGGAGTC +
Preference number: 5 (lower is better)
Translates to: PRQDRAMPLQTLPLLLGSWCWAP*PEGCGV
Trigger: GACTCCGCAGCCTTCCGGCAAGGGAGCCCAACACCA...AGACCCCAGCAGGAGTGGGAGGGTCTGCAATGGCATCGCCCTGTCCTGCCTTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp GGCTTCTGGCCAAGGCAGGACAGGGCGATGCCATTGCAGACCCTCCCACTCCTGCTGGCAAGGCTGGTGTaGGGCTCCCTTGCCGGAAGG +
Preference number: 5 (lower is better)
Translates to: GFWPRQDRAMPLQTLPLLLARLV*GSLAGR
Trigger: CCTTCCGGCAAGGGAGCCCAACACCAGCCTTGCCAG...CAGGAGTGGGAGGGTCTGCAATGGCATCGCCCTGTCCTGCCTTGGCCAGAAGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp GGCTTCTGGCCAAGGCAGGACAGGGCGATGCCATTGCAGACCCTCCCACTCCTGAAGAGGTGGCAGGCGTaGTCCGTGGTGCTGCCCTGC +
Preference number: 5 (lower is better)
Translates to: GFWPRQDRAMPLQTLPLLKRWQA*SVVLPC
Trigger: GCAGGGCAGCACCACGGACAACGCCTGCCACCTCTT...CAGGAGTGGGAGGGTCTGCAATGGCATCGCCCTGTCCTGCCTTGGCCAGAAGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp CTGGACAGCTGGTGGCAGCACGGGACTGAACCTGCTGGGGTCTGCGTCGCTGCGACCTTGGAGACGAAGTaGACGATGGCAGAGGCCGGC +
Preference number: 5 (lower is better)
Translates to: LDSWWQHGTEPAGVCVAATLETK*TMAEAG
Trigger: GCCGGCCTCTGCCATCGTCAACTTCGTCTCCAAGGT...CGCAGCGACGCAGACCCCAGCAGGTTCAGTCCCGTGCTGCCACCAGCTGTCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS GCA 90 bp CCTGCTGGGCGGGACCTGAGGTGCTGGGTGTGGTACATGGCGCCTTaGTTCTCTCGCTCTAAGCCAAAGCCACTCAGCAGGCGGTCCAGC +
Preference number: 5 (lower is better)
Translates to: PAGRDLRCWVWYMAP*FSRSKPKPLSRRSS
Trigger: GCTGGACCGCCTGCTGAGTGGCTTTGGCTTAGAGCGAGAGAAGCAAGGCGCCATGTACCACACCCAGCACCTCAGGTCCCGCCCAGCAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446903.5
ENST00000479185.1
ENST00000480665.1
ENST00000611415.4
ENST00000615025.5
ENST00000646520.1
ENST00000651849.1
ENST00000682258.1
CDS GCA 90 bp GCTCTTTCCTGCTGGCGTGGAGGTGGGCGAGGCTGCTGCTGCTGCTaGTGCTGCTGCTGCCACGAATTCAGTCCCCTTTGCACAGCCTCC +
Preference number: 5 (lower is better)
Translates to: ALSCWRGGGRGCCCC*CCCCHEFSPLCTAS
Trigger: GGAGGCTGTGCAAAGGGGACTGAATTCGTGGCAGCAGCAGCAGCAGCAGCAGCAGCAGCCTCGCCCACCTCCACGCCAGCAGGAAAGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000615025.5
ENST00000646520.1
ENST00000651849.1
ENST00000682258.1
CDS GCA 90 bp CAGACTCCAACAGAGGCTGGGTGGGCGTCCGGGGACCCTGGTCACTaGTCTCTCCCGACGGGAAACTCCCCACTGAAGTGCTGTCAGCAC +
Preference number: 5 (lower is better)
Translates to: QTPTEAGWASGDPGH*SLPTGNSPLKCCQH
Trigger: GTGCTGACAGCACTTCAGTGGGGAGTTTCCCGTCGGGAGAGAGCAGTGACCAGGGTCCCCGGACGCCCACCCAGCCTCTGTTGGAGTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000615025.5
ENST00000646520.1
ENST00000651849.1
ENST00000682258.1
CDS GCA 90 bp ACTGACATCCTTCGCTTCTCTGGCAAGGCTGGTGTTGGGCTCCCTTaGCGGAAGGCTGCGGAGTCTGGTGACGGGGAGGTGGCAGGGCTG +
Preference number: 5 (lower is better)
Translates to: TDILRFSGKAGVGLP*RKAAESGDGEVAGL
Trigger: CAGCCCTGCCACCTCCCCGTCACCAGACTCCGCAGCCTTCCGGCAAGGGAGCCCAACACCAGCCTTGCCAGAGAAGCGAAGGATGTCAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000615025.5
ENST00000646520.1
ENST00000651849.1
ENST00000682258.1
CDS CCA 90 bp CACTGGAGGCCCCGGGGACAGGCTCGTCGGTCTTGTCGGTCTTGGTaGAGGCTGTGGAGTTGCCCGAGTCGCTGCTCACAGAAAGCGTGT +
Preference number: 5 (lower is better)
Translates to: HWRPRGQARRSCRSW*RLWSCPSRCSQKAC
Trigger: ACACGCTTTCTGTGAGCAGCGACTCGGGCAACTCCACAGCCTCCACCAAGACCGACAAGACCGACGAGCCTGTCCCCGGGGCCTCCAGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446903.5
ENST00000479185.1
ENST00000480665.1
ENST00000611415.4
ENST00000615025.5
ENST00000646520.1
ENST00000651849.1
ENST00000682258.1
CDS CCA 90 bp CCTGCTGGCTACAAGACTCTCCAAGTGGGCTCTTTCCTGCTGGCGTaGAGGTGGGCGAGGCTGCTGCTGCTGCTGCTGCTGCTGCTGCCA +
Preference number: 5 (lower is better)
Translates to: PAGYKTLQVGSFLLA*RWARLLLLLLLLLP
Trigger: TGGCAGCAGCAGCAGCAGCAGCAGCAGCAGCCTCGCCCACCTCCACGCCAGCAGGAAAGAGCCCACTTGGAGAGTCTTGTAGCCAGCAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000615025.5
ENST00000646520.1
ENST00000651849.1
ENST00000682258.1
CDS CCA 90 bp CTGCACCCCTCTCCTGGCTCCGCAGTGCCTACGAGGCAGGATAGGTaGGTTCCGAGGTCCAGCTCCCAGCTGAGCCCCAAGTTAGAGCAG +
Preference number: 5 (lower is better)
Translates to: LHPSPGSAVPTRQDR*VPRSSSQLSPKLEQ
Trigger: CTGCTCTAACTTGGGGCTCAGCTGGGAGCTGGACCTCGGAACCCACCTATCCTGCCTCGTAGGCACTGCGGAGCCAGGAGAGGGGTGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000439083.5
CDS-3UTR CAA 90 bp GGCTTCTGGCCAAGGCAGGACAGGGCGATGCCATTGCAGACCCTCCCACTCCTGGACTTGTCCAGACCGTaGGTCAGTGGGGACAGGGCC +
Preference number: 5 (lower is better)
Translates to: GFWPRQDRAMPLQTLPLLDLSRP*VSGDRA
Trigger: GGCCCTGTCCCCACTGACCAACGGTCTGGACAAGTC...CAGGAGTGGGAGGGTCTGCAATGGCATCGCCCTGTCCTGCCTTGGCCAGAAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp TCTGCCCTCTGCTGCATGGGCAGCGTGGCTCAGCTAGGGAAACCAAGGCAGAAAGGAGGCCAGGTTGCCTaGGTGAGCCCCAGGGTGCCG +
Preference number: 5 (lower is better)
Translates to: SALCCMGSVAQLGKPRQKGGQVA*VSPRVP
Trigger: CGGCACCCTGGGGCTCACCAAGGCAACCTGGCCTCC...TTTCTGCCTTGGTTTCCCTAGCTGAGCCACGCTGCCCATGCAGCAGAGGGCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp CTGGACAGCTGGTGGCAGCACGGGACTGAACCTGCTGGGGTCTGCGTCGCTGCGAGGTCTGCAGTTGAGTaGGCAGGGCCGGAGCTATCT +
Preference number: 5 (lower is better)
Translates to: LDSWWQHGTEPAGVCVAARSAVE*AGPELS
Trigger: AGATAGCTCCGGCCCTGCCAACTCAACTGCAGACCT...CGCAGCGACGCAGACCCCAGCAGGTTCAGTCCCGTGCTGCCACCAGCTGTCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp GGCTTCTGGCCAAGGCAGGACAGGGCGATGCCATTGCAGACCCTCCCACTCCTGGGATGCTGGGTGATCTaGTTTCCCCCGCAGAGGGCC +
Preference number: 5 (lower is better)
Translates to: GFWPRQDRAMPLQTLPLLGCWVI*FPPQRA
Trigger: GGCCCTCTGCGGGGGAAACAAGATCACCCAGCATCC...CAGGAGTGGGAGGGTCTGCAATGGCATCGCCCTGTCCTGCCTTGGCCAGAAGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS TCA 90 bp TGGGACTGGACATGCCGCTGGCGACAGGCGAAGACACCTTCCCATTaGTGGTGGCATAGTTGGGGAGGCTGCCTGCCCGGTCTCCCACTG +
Preference number: 5 (lower is better)
Translates to: WDWTCRWRQAKTPSH*WWHSWGGCLPGLPL
Trigger: CAGTGGGAGACCGGGCAGGCAGCCTCCCCAACTATGCCACCATCAATGGGAAGGTGTCTTCGCCTGTCGCCAGCGGCATGTCCAGTCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000615025.5
ENST00000646520.1
ENST00000651849.1
ENST00000682258.1
CDS GCA 90 bp TCCAAGTGGGCTCTTTCCTGCTGGCGTGGAGGTGGGCGAGGCTGCTaGTGCTGCTGCTGCTGCTGCTGCCACGAATTCAGTCCCCTTTGC +
Preference number: 5 (lower is better)
Translates to: SKWALSCWRGGGRGC*CCCCCCCHEFSPLC
Trigger: GCAAAGGGGACTGAATTCGTGGCAGCAGCAGCAGCAGCAGCAGCAGCAGCCTCGCCCACCTCCACGCCAGCAGGAAAGAGCCCACTTGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000615025.5
ENST00000646520.1
ENST00000651849.1
ENST00000682258.1
CDS GCA 90 bp TGGAGTACTTGGAGAAGTCGGGCAGAGTGTGGGAGAAGGAGACGGTaGTGCCCCCACTGGGACTGGACATGCCGCTGGCGACAGGCGAAG +
Preference number: 5 (lower is better)
Translates to: WSTWRSRAECGRRRR*CPHWDWTCRWRQAK
Trigger: CTTCGCCTGTCGCCAGCGGCATGTCCAGTCCCAGTGGGGGCAGCACCGTCTCCTTCTCCCACACTCTGCCCGACTTCTCCAAGTACTCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000615025.5
ENST00000646520.1
ENST00000651849.1
ENST00000682258.1
CDS GCA 90 bp CTGCTAAGAGGGGGACCCTCCATCCAGCTGTCCGGAAGAAGGCTCTaGCCAGAGTCCCAGCTGCCTCGGACCAATGAGCAGCTCCTCAGC +
Preference number: 5 (lower is better)
Translates to: LLRGGPSIQLSGRRL*PESQLPRTNEQLLS
Trigger: GCTGAGGAGCTGCTCATTGGTCCGAGGCAGCTGGGACTCTGGGCAGAGCCTTCTTCCGGACAGCTGGATGGAGGGTCCCCCTCTTAGCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000439083.5
CDS CCA 90 bp CTCAGAGTCAAGTGCTGTGCCAATCTGCGGGCACACACCACAGGCTaGCTCCCGGGCTCTCCTGTGTGCCTGAGCTCACACCACTGCAGG +
Preference number: 5 (lower is better)
Translates to: LRVKCCANLRAHTTG*LPGSPVCLSSHHCR
Trigger: CCTGCAGTGGTGTGAGCTCAGGCACACAGGAGAGCCCGGGAGCCAGCCTGTGGTGTGTGCCCGCAGATTGGCACAGCACTTGACTCTGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492338.2
CDS-3UTR CAA 90 bp CATGGGTGCACAGCCCGCCGTGACACAGAAGGGCTCTGGTGCAGGGCCCAGAGGATGCACGTACCTTCTTaGGGATGGCTGGCCAATGGG +
Preference number: 5 (lower is better)
Translates to: HGCTARRDTEGLWCRAQRMHVPS*GWLANG
Trigger: CCCATTGGCCAGCCATCCCAAAGAAGGTACGTGCAT...CCTCTGGGCCCTGCACCAGAGCCCTTCTGTGTCACGGCGGGCTGTGCACCCATG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp CCAAGGCAGGACAGGGCGATGCCATTGCAGACCCTCCCACTCCTGCTGGGGTCTGTGTGTTCCACGTGGTaGGGGGTGGCCGACAGTGTA +
Preference number: 5 (lower is better)
Translates to: PRQDRAMPLQTLPLLLGSVCSTW*GVADSV
Trigger: TACACTGTCGGCCACCCCCAACCACGTGGAACACAC...AGACCCCAGCAGGAGTGGGAGGGTCTGCAATGGCATCGCCCTGTCCTGCCTTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp CCCAACTGTCCAGTGGACCTTAGGCCCTTTGGCCCAAGTGCAAGCCTTCTGCCCGCAGCCATGCTGGGATaGATGGCCCGCCAGCCGAAG +
Preference number: 5 (lower is better)
Translates to: PNCPVDLRPFGPSASLLPAAMLG*MARQPK
Trigger: CTTCGGCTGGCGGGCCATCAATCCCAGCATGGCTGC...GGGCAGAAGGCTTGCACTTGGGCCAAAGGGCCTAAGGTCCACTGGACAGTTGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp GAGAAGGGTCTGGCGGCACCCAGGGTCACTAGAGTGCAGGTGCAGGCACCAGGAGGGGTGGTGGCCACTTaGTTGTGGAGGCCAGAAACC +
Preference number: 5 (lower is better)
Translates to: EKGLAAPRVTRVQVQAPGGVVAT*LWRPET
Trigger: GGTTTCTGGCCTCCACAACAAAGTGGCCACCACCCC...TCCTGGTGCCTGCACCTGCACTCTAGTGACCCTGGGTGCCGCCAGACCCTTCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp CACATGCGCACACACGTCCTGTGTTACCACTGGCCAAGGAAACGCGAGTCTCAGGGAGGCCAGGTTGCCTaGGTGAGCCCCAGGGTGCCG +
Preference number: 5 (lower is better)
Translates to: HMRTHVLCYHWPRKRESQGGQVA*VSPRVP
Trigger: CGGCACCCTGGGGCTCACCAAGGCAACCTGGCCTCC...CTGAGACTCGCGTTTCCTTGGCCAGTGGTAACACAGGACGTGTGTGCGCATGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp GTAGAAGAGAAGGGTCTGGCGGCACCCAGGGTCACTAGAGTGCAGGTGCAGGCATGGTGTTGGGCTCCCTaGCCGGAAGGCTGCGGAGTC +
Preference number: 5 (lower is better)
Translates to: VEEKGLAAPRVTRVQVQAWCWAP*PEGCGV
Trigger: GACTCCGCAGCCTTCCGGCAAGGGAGCCCAACACCA...TGCCTGCACCTGCACTCTAGTGACCCTGGGTGCCGCCAGACCCTTCTCTTCTAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp CGATGCCATTGCAGACCCTCCCACTCCTGCTGGGGTCTTTGTAGAAGAGAAGGGCCCGGCTCCTGGTCCTaGAGGAGCGCGATGGCCTGC +
Preference number: 5 (lower is better)
Translates to: RCHCRPSHSCWGLCRREGPGSWS*RSAMAC
Trigger: GCAGGCCATCGCGCTCCTCAAGGACCAGGAGCCGGG...CCCTTCTCTTCTACAAAGACCCCAGCAGGAGTGGGAGGGTCTGCAATGGCATCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp CATGGGTGCACAGCCCGCCGTGACACAGAAGGGCTCTGGTGCAGGGCCCAGAGGATTGCAGGCTGCCCCTaGTTTCAGCAGGTCTGCAGT +
Preference number: 5 (lower is better)
Translates to: HGCTARRDTEGLWCRAQRIAGCP*FQQVCS
Trigger: ACTGCAGACCTGCTGAAACAAGGGGCAGCCTGCAAT...CCTCTGGGCCCTGCACCAGAGCCCTTCTGTGTCACGGCGGGCTGTGCACCCATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp CCCAACTGTCCAGTGGACCTTAGGCCCTTTGGCCCAAGTGCAAGCCTTCTGCCCAAGAGGTGGCAGGCGTaGTCCGTGGTGCTGCCCTGC +
Preference number: 5 (lower is better)
Translates to: PNCPVDLRPFGPSASLLPKRWQA*SVVLPC
Trigger: GCAGGGCAGCACCACGGACAACGCCTGCCACCTCTT...GGGCAGAAGGCTTGCACTTGGGCCAAAGGGCCTAAGGTCCACTGGACAGTTGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp GGCTTCTGGCCAAGGCAGGACAGGGCGATGCCATTGCAGACCCTCCCACTCCTGACCTTGGAGACGAAGTaGACGATGGCAGAGGCCGGC +
Preference number: 5 (lower is better)
Translates to: GFWPRQDRAMPLQTLPLLTLETK*TMAEAG
Trigger: GCCGGCCTCTGCCATCGTCAACTTCGTCTCCAAGGT...CAGGAGTGGGAGGGTCTGCAATGGCATCGCCCTGTCCTGCCTTGGCCAGAAGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS GCA 90 bp CGGTCTTGTCGGTCTTGGTGGAGGCTGTGGAGTTGCCCGAGTCGCTaGTCACAGAAAGCGTGTGTTCCACGTGGTTGGGGGTGGCCGACA +
Preference number: 5 (lower is better)
Translates to: RSCRSWWRLWSCPSR*SQKACVPRGWGWPT
Trigger: TGTCGGCCACCCCCAACCACGTGGAACACACGCTTTCTGTGAGCAGCGACTCGGGCAACTCCACAGCCTCCACCAAGACCGACAAGACCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000171887.8
ENST00000413554.5
ENST00000419504.5
ENST00000430930.5
ENST00000446903.5
ENST00000479185.1
ENST00000480665.1
ENST00000611415.4
ENST00000615025.5
ENST00000646520.1
ENST00000651849.1
ENST00000682258.1
CDS GCA 90 bp AAGTGGGCTCTTTCCTGCTGGCGTGGAGGTGGGCGAGGCTGCTGCTaGTGCTGCTGCTGCTGCTGCCACGAATTCAGTCCCCTTTGCACA +
Preference number: 5 (lower is better)
Translates to: KWALSCWRGGGRGCC*CCCCCCHEFSPLCT
Trigger: TGTGCAAAGGGGACTGAATTCGTGGCAGCAGCAGCAGCAGCAGCAGCAGCAGCCTCGCCCACCTCCACGCCAGCAGGAAAGAGCCCACTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000615025.5
ENST00000646520.1
ENST00000651849.1
ENST00000682258.1
CDS GCA 90 bp AGTACTTGGAGAAGTCGGGCAGAGTGTGGGAGAAGGAGACGGTGCTaGCCCCACTGGGACTGGACATGCCGCTGGCGACAGGCGAAGACA +
Preference number: 5 (lower is better)
Translates to: STWRSRAECGRRRRC*PHWDWTCRWRQAKT
Trigger: TGTCTTCGCCTGTCGCCAGCGGCATGTCCAGTCCCAGTGGGGGCAGCACCGTCTCCTTCTCCCACACTCTGCCCGACTTCTCCAAGTACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000615025.5
ENST00000646520.1
ENST00000651849.1
ENST00000682258.1
CDS GCA 90 bp GGACCTGGCACAGCATCTGACCCAGAGGACAGCTCAGTTCATGATTaGCAGATGGCTGCACGCAGCGCGGAGGAGGTGAGCAGCAGCCTG +
Preference number: 5 (lower is better)
Translates to: GPGTASDPEDSSVHD*QMAARSAEEVSSSL
Trigger: CAGGCTGCTGCTCACCTCCTCCGCGCTGCGTGCAGCCATCTGGCAATCATGAACTGAGCTGTCCTCTGGGTCAGATGCTGTGCCAGGTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465306.1
CDS GCA 90 bp CCCATGAAGGTTGCACTGCTCTCTAGCACAGGCCTCAGAGTCAAGTaGTGTGCCAATCTGCGGGCACACACCACAGGCTGGCTCCCGGGC +
Preference number: 5 (lower is better)
Translates to: PMKVALLSSTGLRVK*CANLRAHTTGWLPG
Trigger: GCCCGGGAGCCAGCCTGTGGTGTGTGCCCGCAGATTGGCACAGCACTTGACTCTGAGGCCTGTGCTAGAGAGCAGTGCAACCTTCATGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492338.2
CDS GCA 90 bp TGCGGAGGCAGAAGCGCAGGGGCAGGAGGCACGAGAAGAGGTACTTaGCCCATCGGATCACGCAGGAGAAGCACCAACTCAGCCGAGTCA +
Preference number: 5 (lower is better)
Translates to: CGGRSAGAGGTRRGT*PIGSRRRSTNSAES
Trigger: TGACTCGGCTGAGTTGGTGCTTCTCCTGCGTGATCCGATGGGGCAAGTACCTCTTCTCGTGCCTCCTGCCCCTGCGCTTCTGCCTCCGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646520.1
CDS CCA 90 bp GGCTACAAGACTCTCCAAGTGGGCTCTTTCCTGCTGGCGTGGAGGTaGGCGAGGCTGCTGCTGCTGCTGCTGCTGCTGCTGCCACGAATT +
Preference number: 5 (lower is better)
Translates to: GYKTLQVGSFLLAWR*ARLLLLLLLLLPRI
Trigger: AATTCGTGGCAGCAGCAGCAGCAGCAGCAGCAGCAGCCTCGCCCACCTCCACGCCAGCAGGAAAGAGCCCACTTGGAGAGTCTTGTAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000615025.5
ENST00000646520.1
ENST00000651849.1
ENST00000682258.1
CDS CCA 90 bp GAGAGGCCCGTGGGGCTGGCTCAGGGGTTCCCAACGAATGCCCACTaGGGATATAGCCAGATCTGGACTGGGTCAGTGGATGGGACTGAC +
Preference number: 5 (lower is better)
Translates to: ERPVGLAQGFPTNAH*GYSQIWTGSVDGTD
Trigger: GTCAGTCCCATCCACTGACCCAGTCCAGATCTGGCTATATCCCCAGTGGGCATTCGTTGGGAACCCCTGAGCCAGCCCCACGGGCCTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000615025.5
ENST00000646520.1
ENST00000651849.1
ENST00000682258.1
CDS CCA 90 bp GGTCCCGTTCCTCAGGGGTATCTCATGGCCATAGGCCTGGGTGGCTaGAGCACTAAAGCTCTTGGGCTCAGAGTCCTGAGCTCGGGGTCC +
Preference number: 5 (lower is better)
Translates to: GPVPQGYLMAIGLGG*STKALGLRVLSSGS
Trigger: GGACCCCGAGCTCAGGACTCTGAGCCCAAGAGCTTTAGTGCTCCAGCCACCCAGGCCTATGGCCATGAGATACCCCTGAGGAACGGGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000615025.5
ENST00000646520.1
ENST00000651849.1
ENST00000682258.1
CDS CCA 90 bp TCGGGAGAGGAGAAGAGCTCTGGTAGTTTCTCTGGGCAGACGGGCTaGGCTGTCCCAGGCTGCCTGAGCGGAAGCCAGACTCCAACAGAG +
Preference number: 5 (lower is better)
Translates to: SGEEKSSGSFSGQTG*AVPGCLSGSQTPTE
Trigger: CTCTGTTGGAGTCTGGCTTCCGCTCAGGCAGCCTGGGACAGCCCAGCCCGTCTGCCCAGAGAAACTACCAGAGCTCTTCTCCTCTCCCGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000615025.5
ENST00000646520.1
ENST00000651849.1
ENST00000682258.1
CDS CCA 90 bp GCTCTGGGGGCTGGAGACAGTGCTACCATGGAAGCCAGTGCCTGGTaGACCCATCATCTGGTGATGGCTCAAACTGGGACTGCTGGGGGC +
Preference number: 5 (lower is better)
Translates to: ALGAGDSATMEASAW*THHLVMAQTGTAGG
Trigger: GCCCCCAGCAGTCCCAGTTTGAGCCATCACCAGATGATGGGTCCACCAGGCACTGGCTTCCATGGTAGCACTGTCTCCAGCCCCCAGAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000615025.5
ENST00000646520.1
ENST00000651849.1
ENST00000682258.1
CDS-3UTR CAA 90 bp AAGAGAAGGGTCTGGCGGCACCCAGGGTCACTAGAGTGCAGGTGCAGGCACCAGACCCTGGTGGAGCCGTaGTCCTCGAGGCTTTTCCGT +
Preference number: 5 (lower is better)
Translates to: KRRVWRHPGSLECRCRHQTLVEP*SSRLFR
Trigger: ACGGAAAAGCCTCGAGGACAACGGCTCCACCAGGGT...CTGGTGCCTGCACCTGCACTCTAGTGACCCTGGGTGCCGCCAGACCCTTCTCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp CATGGGTGCACAGCCCGCCGTGACACAGAAGGGCTCTGGTGCAGGGCCCAGAGGCATAGAACCGCTTCATaGCAAACCGGTCCAGAGCCT +
Preference number: 5 (lower is better)
Translates to: HGCTARRDTEGLWCRAQRHRTAS*QTGPEP
Trigger: AGGCTCTGGACCGGTTTGCAATGAAGCGGTTCTATG...CCTCTGGGCCCTGCACCAGAGCCCTTCTGTGTCACGGCGGGCTGTGCACCCATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp CCCAACTGTCCAGTGGACCTTAGGCCCTTTGGCCCAAGTGCAAGCCTTCTGCCCGTGGAGGCTGTGGAGTaGCCCGAGTCGCTGCTCACA +
Preference number: 5 (lower is better)
Translates to: PNCPVDLRPFGPSASLLPVEAVE*PESLLT
Trigger: TGTGAGCAGCGACTCGGGCAACTCCACAGCCTCCAC...GGGCAGAAGGCTTGCACTTGGGCCAAAGGGCCTAAGGTCCACTGGACAGTTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp GCAGACCCTCCCACTCCTGCTGGGGTCTTTGTAGAAGAGAAGGGTCTGGCGGCAGTGGAGGCTGTGGAGTaGCCCGAGTCGCTGCTCACA +
Preference number: 5 (lower is better)
Translates to: ADPPTPAGVFVEEKGLAAVEAVE*PESLLT
Trigger: TGTGAGCAGCGACTCGGGCAACTCCACAGCCTCCAC...TGCCGCCAGACCCTTCTCTTCTACAAAGACCCCAGCAGGAGTGGGAGGGTCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp GTAGAAGAGAAGGGTCTGGCGGCACCCAGGGTCACTAGAGTGCAGGTGCAGGCAGTGGAGGCTGTGGAGTaGCCCGAGTCGCTGCTCACA +
Preference number: 5 (lower is better)
Translates to: VEEKGLAAPRVTRVQVQAVEAVE*PESLLT
Trigger: TGTGAGCAGCGACTCGGGCAACTCCACAGCCTCCAC...TGCCTGCACCTGCACTCTAGTGACCCTGGGTGCCGCCAGACCCTTCTCTTCTAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp ATGTCCCACGGTGGCTCTGTTTGGTTTGACAACCTACCCCACAGGTGGCCAGAACCCGGCTCCTGGTCCTaGAGGAGCGCGATGGCCTGC +
Preference number: 5 (lower is better)
Translates to: MSHGGSVWFDNLPHRWPEPGSWS*RSAMAC
Trigger: GCAGGCCATCGCGCTCCTCAAGGACCAGGAGCCGGG...TTCTGGCCACCTGTGGGGTAGGTTGTCAAACCAAACAGAGCCACCGTGGGACAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp TGGTCAGGTGTTTTCCCAACTGTCCAGTGGACCTTAGGCCCTTTGGCCCAAGTGCCCGGCTCCTGGTCCTaGAGGAGCGCGATGGCCTGC +
Preference number: 5 (lower is better)
Translates to: WSGVFPTVQWTLGPLAQVPGSWS*RSAMAC
Trigger: GCAGGCCATCGCGCTCCTCAAGGACCAGGAGCCGGG...CACTTGGGCCAAAGGGCCTAAGGTCCACTGGACAGTTGGGAAAACACCTGACCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp CCTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCCTCCCCCGGCTCCTGGTCCTaGAGGAGCGCGATGGCCTGC +
Preference number: 5 (lower is better)
Translates to: PLPTLHFLLSSEIGPKSSPGSWS*RSAMAC
Trigger: GCAGGCCATCGCGCTCCTCAAGGACCAGGAGCCGGG...GGAGGACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp GAGAAGGGTCTGGCGGCACCCAGGGTCACTAGAGTGCAGGTGCAGGCACCAGGAACAGCGATCCGAAGTTaGGCTCATTGGGGCAGCCCT +
Preference number: 5 (lower is better)
Translates to: EKGLAAPRVTRVQVQAPGTAIRS*AHWGSP
Trigger: AGGGCTGCCCCAATGAGCCAAACTTCGGATCGCTGT...TCCTGGTGCCTGCACCTGCACTCTAGTGACCCTGGGTGCCGCCAGACCCTTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp GCTATCGCTGAGACTCCACCAATTGGTTGGCCTACAGGCCTCACCTCCCGACTCAAGAGGTGGCAGGCGTaGTCCGTGGTGCTGCCCTGC +
Preference number: 5 (lower is better)
Translates to: AIAETPPIGWPTGLTSRLKRWQA*SVVLPC
Trigger: GCAGGGCAGCACCACGGACAACGCCTGCCACCTCTT...GAGTCGGGAGGTGAGGCCTGTAGGCCAACCAATTGGTGGAGTCTCAGCGATAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp GTAGAAGAGAAGGGTCTGGCGGCACCCAGGGTCACTAGAGTGCAGGTGCAGGCAGCTGAGCCACATGCCTaGGGGAAGACACCCCGAGCT +
Preference number: 5 (lower is better)
Translates to: VEEKGLAAPRVTRVQVQAAEPHA*GKTPRA
Trigger: AGCTCGGGGTGTCTTCCCCAAGGCATGTGGCTCAGC...TGCCTGCACCTGCACTCTAGTGACCCTGGGTGCCGCCAGACCCTTCTCTTCTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp CTGGACAGCTGGTGGCAGCACGGGACTGAACCTGCTGGGGTCTGCGTCGCTGCGAGCAACTTGCCTTTCTaGCTGCTGAGCCACATGCCT +
Preference number: 5 (lower is better)
Translates to: LDSWWQHGTEPAGVCVAASNLPF*LLSHMP
Trigger: AGGCATGTGGCTCAGCAGCAAGAAAGGCAAGTTGCT...CGCAGCGACGCAGACCCCAGCAGGTTCAGTCCCGTGCTGCCACCAGCTGTCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp CCCAACTGTCCAGTGGACCTTAGGCCCTTTGGCCCAAGTGCAAGCCTTCTGCCCCCCCAGCCAGGCTGCTaGAAGGGTCTGATACACCGC +
Preference number: 5 (lower is better)
Translates to: PNCPVDLRPFGPSASLLPPQPGC*KGLIHR
Trigger: GCGGTGTATCAGACCCTTCAAGCAGCCTGGCTGGGG...GGGCAGAAGGCTTGCACTTGGGCCAAAGGGCCTAAGGTCCACTGGACAGTTGGG
62% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS TCA 90 bp GGGCTCTCCTGTGTGCCTGAGCTCACACCACTGCAGGCTGGCATCTaGAAACTTGCGCCTGGTACACCCCCACCTAGGCACAGCTATCCC +
Preference number: 5 (lower is better)
Translates to: GLSCVPELTPLQAGI*KLAPGTPPPRHSYP
Trigger: GGGATAGCTGTGCCTAGGTGGGGGTGTACCAGGCGCAAGTTTTCAGATGCCAGCCTGCAGTGGTGTGAGCTCAGGCACACAGGAGAGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000492338.2
CDS GCA 90 bp GGACAGGCTCGTCGGTCTTGTCGGTCTTGGTGGAGGCTGTGGAGTTaGCCGAGTCGCTGCTCACAGAAAGCGTGTGTTCCACGTGGTTGG +
Preference number: 5 (lower is better)
Translates to: GQARRSCRSWWRLWS*PSRCSQKACVPRGW
Trigger: CCAACCACGTGGAACACACGCTTTCTGTGAGCAGCGACTCGGGCAACTCCACAGCCTCCACCAAGACCGACAAGACCGACGAGCCTGTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446903.5
ENST00000479185.1
ENST00000480665.1
ENST00000611415.4
ENST00000615025.5
ENST00000646520.1
ENST00000651849.1
ENST00000682258.1
CDS GCA 90 bp CCTCCATCCAGCTGTCCGGAAGAAGGCTCTGCCCAGAGTCCCAGCTaGCTCGGACCAATGAGCAGCTCCTCAGCAGTGAAGGAGGGAAGA +
Preference number: 5 (lower is better)
Translates to: PPSSCPEEGSAQSPS*LGPMSSSSAVKEGR
Trigger: TCTTCCCTCCTTCACTGCTGAGGAGCTGCTCATTGGTCCGAGGCAGCTGGGACTCTGGGCAGAGCCTTCTTCCGGACAGCTGGATGGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439083.5
CDS-3UTR CAA 90 bp GCAGACCCTCCCACTCCTGCTGGGGTCTTTGTAGAAGAGAAGGGTCTGGCGGCAACCCTGGTGGAGCCGTaGTCCTCGAGGCTTTTCCGT +
Preference number: 5 (lower is better)
Translates to: ADPPTPAGVFVEEKGLAATLVEP*SSRLFR
Trigger: ACGGAAAAGCCTCGAGGACAACGGCTCCACCAGGGT...TGCCGCCAGACCCTTCTCTTCTACAAAGACCCCAGCAGGAGTGGGAGGGTCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp GAGAAGGGTCTGGCGGCACCCAGGGTCACTAGAGTGCAGGTGCAGGCACCAGGACCTCCATGTTTGGACTaGAGCATCTGCGCCACCTCA +
Preference number: 5 (lower is better)
Translates to: EKGLAAPRVTRVQVQAPGPPCLD*SICATS
Trigger: TGAGGTGGCGCAGATGCTCAAGTCCAAACATGGAGG...TCCTGGTGCCTGCACCTGCACTCTAGTGACCCTGGGTGCCGCCAGACCCTTCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp GTGTGCATGGGTGCACAGCCCGCCGTGACACAGAAGGGCTCTGGTGCAGGGCCCCTGCCTCGGTTTCCCTaGTTGTGTAGAACAACGACA +
Preference number: 5 (lower is better)
Translates to: VCMGAQPAVTQKGSGAGPLPRFP*LCRTTT
Trigger: TGTCGTTGTTCTACACAACAAGGGAAACCGAGGCAG...GGGCCCTGCACCAGAGCCCTTCTGTGTCACGGCGGGCTGTGCACCCATGCACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp CCCAACTGTCCAGTGGACCTTAGGCCCTTTGGCCCAAGTGCAAGCCTTCTGCCCACAGGCTCGTCGGTCTaGTCGGTCTTGGTGGAGGCT +
Preference number: 5 (lower is better)
Translates to: PNCPVDLRPFGPSASLLPTGSSV*SVLVEA
Trigger: AGCCTCCACCAAGACCGACAAGACCGACGAGCCTGT...GGGCAGAAGGCTTGCACTTGGGCCAAAGGGCCTAAGGTCCACTGGACAGTTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp CTGGACAGCTGGTGGCAGCACGGGACTGAACCTGCTGGGGTCTGCGTCGCTGCGTGTGACCATCCTGGTTaGGCAATTCATCGTCCAGGA +
Preference number: 5 (lower is better)
Translates to: LDSWWQHGTEPAGVCVAACDHPG*AIHRPG
Trigger: TCCTGGACGATGAATTGCCAAACCAGGATGGTCACA...CGCAGCGACGCAGACCCCAGCAGGTTCAGTCCCGTGCTGCCACCAGCTGTCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp GCAGACCCTCCCACTCCTGCTGGGGTCTTTGTAGAAGAGAAGGGTCTGGCGGCATGCAAATGGGGCTCTTaGGGCCGCCCTCCAGGATTG +
Preference number: 5 (lower is better)
Translates to: ADPPTPAGVFVEEKGLAACKWGS*GRPPGL
Trigger: CAATCCTGGAGGGCGGCCCAAAGAGCCCCATTTGCA...TGCCGCCAGACCCTTCTCTTCTACAAAGACCCCAGCAGGAGTGGGAGGGTCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp GGGCGATGCCATTGCAGACCCTCCCACTCCTGCTGGGGTCTTTGTAGAAGAGAAGCAGCCATGCTGGGATaGATGGCCCGCCAGCCGAAG +
Preference number: 5 (lower is better)
Translates to: GRCHCRPSHSCWGLCRREAAMLG*MARQPK
Trigger: CTTCGGCTGGCGGGCCATCAATCCCAGCATGGCTGC...TTCTCTTCTACAAAGACCCCAGCAGGAGTGGGAGGGTCTGCAATGGCATCGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp GGGCGATGCCATTGCAGACCCTCCCACTCCTGCTGGGGTCTTTGTAGAAGAGAACTGGCAAGGCTGGTGTaGGGCTCCCTTGCCGGAAGG +
Preference number: 5 (lower is better)
Translates to: GRCHCRPSHSCWGLCRRELARLV*GSLAGR
Trigger: CCTTCCGGCAAGGGAGCCCAACACCAGCCTTGCCAG...TTCTCTTCTACAAAGACCCCAGCAGGAGTGGGAGGGTCTGCAATGGCATCGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp GTAGAAGAGAAGGGTCTGGCGGCACCCAGGGTCACTAGAGTGCAGGTGCAGGCAATAGGGGGATCACACTaGTCCAGGAGGGCTGCCCCT +
Preference number: 5 (lower is better)
Translates to: VEEKGLAAPRVTRVQVQAIGGSH*SRRAAP
Trigger: AGGGGCAGCCCTCCTGGACAAGTGTGATCCCCCTAT...TGCCTGCACCTGCACTCTAGTGACCCTGGGTGCCGCCAGACCCTTCTCTTCTAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp GCAGACCCTCCCACTCCTGCTGGGGTCTTTGTAGAAGAGAAGGGTCTGGCGGCAATAGGGGGATCACACTaGTCCAGGAGGGCTGCCCCT +
Preference number: 5 (lower is better)
Translates to: ADPPTPAGVFVEEKGLAAIGGSH*SRRAAP
Trigger: AGGGGCAGCCCTCCTGGACAAGTGTGATCCCCCTAT...TGCCGCCAGACCCTTCTCTTCTACAAAGACCCCAGCAGGAGTGGGAGGGTCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp GTGAGGAAGGGAAAAGCGACCGTGAAAGCTGACCCCAGACTCAGTCCTGGGCCCATAGGGGGATCACACTaGTCCAGGAGGGCTGCCCCT +
Preference number: 5 (lower is better)
Translates to: VRKGKATVKADPRLSPGPIGGSH*SRRAAP
Trigger: AGGGGCAGCCCTCCTGGACAAGTGTGATCCCCCTAT...GGGCCCAGGACTGAGTCTGGGGTCAGCTTTCACGGTCGCTTTTCCCTTCCTCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp CCAAGGCAGGACAGGGCGATGCCATTGCAGACCCTCCCACTCCTGCTGGGGTCTGATTGGGTGTCTGCCTaGACTCACAGGATCTCCCCA +
Preference number: 5 (lower is better)
Translates to: PRQDRAMPLQTLPLLLGSDWVSA*THRISP
Trigger: TGGGGAGATCCTGTGAGTCAAGGCAGACACCCAATC...AGACCCCAGCAGGAGTGGGAGGGTCTGCAATGGCATCGCCCTGTCCTGCCTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS TCA 90 bp CTTCTGGTAACTCCTGTGGGGTGCAACAGGATGTCCGCTGGGTTGTaGGGTTTCAGGCCCAGAGCAGACAGGGGTGTCTTGGCCAGACCC +
Preference number: 5 (lower is better)
Translates to: LLVTPVGCNRMSAGL*GFRPRADRGVLARP
Trigger: GGGTCTGGCCAAGACACCCCTGTCTGCTCTGGGCCTGAAACCTCACAACCCAGCGGACATCCTGTTGCACCCCACAGGAGTTACCAGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000611415.4
CDS TCA 90 bp CTGAGCTCGAGCCTGGCTTTCCGGAGAGGAGCTGAAATGCTGAAGTaGGTAGTCGGGGCTGCTGTAGCTACTGCCCACAGTCGGGAGAGG +
Preference number: 5 (lower is better)
Translates to: LSSSLAFRRGAEMLK*VVGAAVATAHSRER
Trigger: CCTCTCCCGACTGTGGGCAGTAGCTACAGCAGCCCCGACTACTCACTTCAGCATTTCAGCTCCTCTCCGGAAAGCCAGGCTCGAGCTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000615025.5
ENST00000646520.1
ENST00000651849.1
ENST00000682258.1
CDS TCA 90 bp ATTGATGGTGGCATAGTTGGGGAGGCTGCCTGCCCGGTCTCCCACTaGCATCCTTCGCTTCTCTGGCAAGGCTGGTGTTGGGCTCCCTTG +
Preference number: 5 (lower is better)
Translates to: IDGGIVGEAACPVSH*HPSLLWQGWCWAPL
Trigger: CAAGGGAGCCCAACACCAGCCTTGCCAGAGAAGCGAAGGATGTCAGTGGGAGACCGGGCAGGCAGCCTCCCCAACTATGCCACCATCAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000615025.5
ENST00000646520.1
ENST00000651849.1
ENST00000682258.1
CDS TCA 90 bp TCATCTTCCTCTCCTGTGGGGTGCAACAGGATGTCCGCTGGGTTGTaGGGTTTCAGGCCCAGAGCAGACAGGGGTGTCTTGGCCAGACCC +
Preference number: 5 (lower is better)
Translates to: SSSSPVGCNRMSAGL*GFRPRADRGVLARP
Trigger: GGGTCTGGCCAAGACACCCCTGTCTGCTCTGGGCCTGAAACCTCACAACCCAGCGGACATCCTGTTGCACCCCACAGGAGAGGAAGATGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651849.1
CDS GCA 90 bp CTGCACTGCTCTGGGGGCTGGAGACAGTGCTACCATGGAAGCCAGTaGCTGGTGGACCCATCATCTGGTGATGGCTCAAACTGGGACTGC +
Preference number: 5 (lower is better)
Translates to: LHCSGGWRQCYHGSQ*LVDPSSGDGSNWDC
Trigger: GCAGTCCCAGTTTGAGCCATCACCAGATGATGGGTCCACCAGGCACTGGCTTCCATGGTAGCACTGTCTCCAGCCCCCAGAGCAGTGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000615025.5
ENST00000646520.1
ENST00000651849.1
ENST00000682258.1
CDS GCA 90 bp TGTTATAGTCCACAGACACGCTCGGCCCGTTCTCCAGGTGCTCCATaGCTAAGTGGGATGGGAAAGGCAGCGGCAGTCGGGGAGACAGTG +
Preference number: 5 (lower is better)
Translates to: CYSPQTRSARSPGAP*LSGMGKAAAVGETV
Trigger: CACTGTCTCCCCGACTGCCGCTGCCTTTCCCATCCCACTTAGGCATGGAGCACCTGGAGAACGGGCCGAGCGTGTCTGTGGACTATAACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479185.1
CDS CCA 90 bp GTGGAGTTGCCCGAGTCGCTGCTCACAGAAAGCGTGTGTTCCACGTaGTTGGGGGTGGCCGACAGTGTAGGACGTGTGGCATTAACAGCC +
Preference number: 5 (lower is better)
Translates to: VELPESLLTESVCST*LGVADSVGRVALTA
Trigger: GGCTGTTAATGCCACACGTCCTACACTGTCGGCCACCCCCAACCACGTGGAACACACGCTTTCTGTGAGCAGCGACTCGGGCAACTCCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000171887.8
ENST00000413554.5
ENST00000419504.5
ENST00000430930.5
ENST00000446903.5
ENST00000479185.1
ENST00000480665.1
ENST00000611415.4
ENST00000615025.5
ENST00000646520.1
ENST00000651849.1
ENST00000682258.1
CDS CCA 90 bp GCTGGGGTTCAGCTTCCGAAAAGGATTGAGAGCGGAACATACCGCTaGGGTCATGGGCATAGTGGGAGGTGGTCACTGGCTGTGGCCAGG +
Preference number: 5 (lower is better)
Translates to: AGVQLPKRIESGTYR*GHGHSGRWSLAVAR
Trigger: CCTGGCCACAGCCAGTGACCACCTCCCACTATGCCCATGACCCCAGCGGTATGTTCCGCTCTCAATCCTTTTCGGAAGCTGAACCCCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446903.5
ENST00000611415.4
ENST00000615025.5
ENST00000646520.1
ENST00000651849.1
ENST00000682258.1
CDS CCA 90 bp ACTGCTCTGGGGGCTGGAGACAGTGCTACCATGGAAGCCAGTGCCTaGTGGACCCATCATCTGGTGATGGCTCAAACTGGGACTGCTGGG +
Preference number: 5 (lower is better)
Translates to: TALGAGDSATMEASA*WTHHLVMAQTGTAG
Trigger: CCCAGCAGTCCCAGTTTGAGCCATCACCAGATGATGGGTCCACCAGGCACTGGCTTCCATGGTAGCACTGTCTCCAGCCCCCAGAGCAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000615025.5
ENST00000646520.1
ENST00000651849.1
ENST00000682258.1
CDS-3UTR CAA 90 bp CGATGCCATTGCAGACCCTCCCACTCCTGCTGGGGTCTTTGTAGAAGAGAAGGGGGCACCAGCTCATGGTaGGATGGAGGAACGCAGGGG +
Preference number: 5 (lower is better)
Translates to: RCHCRPSHSCWGLCRREGGTSSW*DGGTQG
Trigger: CCCCTGCGTTCCTCCATCCAACCATGAGCTGGTGCC...CCCTTCTCTTCTACAAAGACCCCAGCAGGAGTGGGAGGGTCTGCAATGGCATCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp GTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCATGGGTCCCCTCCCCACAAGGGCCGCCCTCCAGGATaGAGAGCGATGGTAAGAGCC +
Preference number: 5 (lower is better)
Translates to: VLLLGSRVVRIHGSPPHKGRPPG*RAMVRA
Trigger: GGCTCTTACCATCGCTCTCAATCCTGGAGGGCGGCC...CTTGTGGGGAGGGGACCCATGAATCCTGACCACTCTTGAACCCAGAAGGAGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp ACAGGGCGATGCCATTGCAGACCCTCCCACTCCTGCTGGGGTCTTTGTAGAAGAGGCCGCCCTCCAGGATaGAGAGCGATGGTAAGAGCC +
Preference number: 5 (lower is better)
Translates to: TGRCHCRPSHSCWGLCRRGRPPG*RAMVRA
Trigger: GGCTCTTACCATCGCTCTCAATCCTGGAGGGCGGCC...TCTTCTACAAAGACCCCAGCAGGAGTGGGAGGGTCTGCAATGGCATCGCCCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp CGATGCCATTGCAGACCCTCCCACTCCTGCTGGGGTCTTTGTAGAAGAGAAGGGGGCCGCCCTCCAGGATaGAGAGCGATGGTAAGAGCC +
Preference number: 5 (lower is better)
Translates to: RCHCRPSHSCWGLCRREGGRPPG*RAMVRA
Trigger: GGCTCTTACCATCGCTCTCAATCCTGGAGGGCGGCC...CCCTTCTCTTCTACAAAGACCCCAGCAGGAGTGGGAGGGTCTGCAATGGCATCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp TCTGCCCTCTGCTGCATGGGCAGCGTGGCTCAGCTAGGGAAACCAAGGCAGAAATGCAAATGGGGCTCTTaGGGCCGCCCTCCAGGATTG +
Preference number: 5 (lower is better)
Translates to: SALCCMGSVAQLGKPRQKCKWGS*GRPPGL
Trigger: CAATCCTGGAGGGCGGCCCAAAGAGCCCCATTTGCA...TTTCTGCCTTGGTTTCCCTAGCTGAGCCACGCTGCCCATGCAGCAGAGGGCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp GCAATTCACTTCCCTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCGGAGGCCAGGTTGCCTaGGTGAGCCCCAGGGTGCCG +
Preference number: 5 (lower is better)
Translates to: AIHFPLPTLHFLLSSEIGGGQVA*VSPRVP
Trigger: CGGCACCCTGGGGCTCACCAAGGCAACCTGGCCTCC...GCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGGGAAGTGAATTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp GGCTTCTGGCCAAGGCAGGACAGGGCGATGCCATTGCAGACCCTCCCACTCCTGTTCCAGGGCTGGCTATaGCATTGCTATGAAGACCGG +
Preference number: 5 (lower is better)
Translates to: GFWPRQDRAMPLQTLPLLFQGWL*HCYEDR
Trigger: CCGGTCTTCATAGCAATGCAATAGCCAGCCCTGGAA...CAGGAGTGGGAGGGTCTGCAATGGCATCGCCCTGTCCTGCCTTGGCCAGAAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp ATGTCCCACGGTGGCTCTGTTTGGTTTGACAACCTACCCCACAGGTGGCCAGAATGGTGTTGGGCTCCCTaGCCGGAAGGCTGCGGAGTC +
Preference number: 5 (lower is better)
Translates to: MSHGGSVWFDNLPHRWPEWCWAP*PEGCGV
Trigger: GACTCCGCAGCCTTCCGGCAAGGGAGCCCAACACCA...TTCTGGCCACCTGTGGGGTAGGTTGTCAAACCAAACAGAGCCACCGTGGGACAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp CCTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCCTCCCTGGCAAGGCTGGTGTaGGGCTCCCTTGCCGGAAGG +
Preference number: 5 (lower is better)
Translates to: PLPTLHFLLSSEIGPKSSLARLV*GSLAGR
Trigger: CCTTCCGGCAAGGGAGCCCAACACCAGCCTTGCCAG...GGAGGACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp AAGAGAAGGGTCTGGCGGCACCCAGGGTCACTAGAGTGCAGGTGCAGGCACCAGTCTGGCATGGAGTACTaGGAGAAGTCGGGCAGAGTG +
Preference number: 5 (lower is better)
Translates to: KRRVWRHPGSLECRCRHQSGMEY*EKSGRV
Trigger: CACTCTGCCCGACTTCTCCAAGTACTCCATGCCAGA...CTGGTGCCTGCACCTGCACTCTAGTGACCCTGGGTGCCGCCAGACCCTTCTCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp GCAATTCACTTCCCTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCCCCGGCTCCTGGTCCTaGAGGAGCGCGATGGCCTGC +
Preference number: 5 (lower is better)
Translates to: AIHFPLPTLHFLLSSEIGPGSWS*RSAMAC
Trigger: GCAGGCCATCGCGCTCCTCAAGGACCAGGAGCCGGG...GCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGGGAAGTGAATTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp GTAGAAGAGAAGGGTCTGGCGGCACCCAGGGTCACTAGAGTGCAGGTGCAGGCAAGGTCTGCAGTTGAGTaGGCAGGGCCGGAGCTATCT +
Preference number: 5 (lower is better)
Translates to: VEEKGLAAPRVTRVQVQARSAVE*AGPELS
Trigger: AGATAGCTCCGGCCCTGCCAACTCAACTGCAGACCT...TGCCTGCACCTGCACTCTAGTGACCCTGGGTGCCGCCAGACCCTTCTCTTCTAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp CCAAGGCAGGACAGGGCGATGCCATTGCAGACCCTCCCACTCCTGCTGGGGTCTTTGACGAAGAGCACATaGCAGGCTGCCCCTTGTTTC +
Preference number: 5 (lower is better)
Translates to: PRQDRAMPLQTLPLLLGSLTKST*QAAPCF
Trigger: GAAACAAGGGGCAGCCTGCAATGTGCTCTTCGTCAA...AGACCCCAGCAGGAGTGGGAGGGTCTGCAATGGCATCGCCCTGTCCTGCCTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp GAGAAGGGTCTGGCGGCACCCAGGGTCACTAGAGTGCAGGTGCAGGCACCAGGATCTGTCACCCATAGCTaGGTTGTTTGTCCCTCCCCT +
Preference number: 5 (lower is better)
Translates to: EKGLAAPRVTRVQVQAPGSVTHS*VVCPSP
Trigger: AGGGGAGGGACAAACAACCAAGCTATGGGTGACAGA...TCCTGGTGCCTGCACCTGCACTCTAGTGACCCTGGGTGCCGCCAGACCCTTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp GGGCGATGCCATTGCAGACCCTCCCACTCCTGCTGGGGTCTTTGTAGAAGAGAAGCTGAGCCACATGCCTaGGGGAAGACACCCCGAGCT +
Preference number: 5 (lower is better)
Translates to: GRCHCRPSHSCWGLCRREAEPHA*GKTPRA
Trigger: AGCTCGGGGTGTCTTCCCCAAGGCATGTGGCTCAGC...TTCTCTTCTACAAAGACCCCAGCAGGAGTGGGAGGGTCTGCAATGGCATCGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp GGCTTCTGGCCAAGGCAGGACAGGGCGATGCCATTGCAGACCCTCCCACTCCTGAGCAACTTGCCTTTCTaGCTGCTGAGCCACATGCCT +
Preference number: 5 (lower is better)
Translates to: GFWPRQDRAMPLQTLPLLSNLPF*LLSHMP
Trigger: AGGCATGTGGCTCAGCAGCAAGAAAGGCAAGTTGCT...CAGGAGTGGGAGGGTCTGCAATGGCATCGCCCTGTCCTGCCTTGGCCAGAAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp CCAAGGCAGGACAGGGCGATGCCATTGCAGACCCTCCCACTCCTGCTGGGGTCTCACTTTGGAGGGACTTaGGTCACCAGGCACAAGGTT +
Preference number: 5 (lower is better)
Translates to: PRQDRAMPLQTLPLLLGSHFGGT*VTRHKV
Trigger: AACCTTGTGCCTGGTGACCAAAGTCCCTCCAAAGTG...AGACCCCAGCAGGAGTGGGAGGGTCTGCAATGGCATCGCCCTGTCCTGCCTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp CTGGACAGCTGGTGGCAGCACGGGACTGAACCTGCTGGGGTCTGCGTCGCTGCGGGAGTGAGACTAGATTaGATCACACTCACCACCCTT +
Preference number: 5 (lower is better)
Translates to: LDSWWQHGTEPAGVCVAAGVRLD*ITLTTL
Trigger: AAGGGTGGTGAGTGTGATCAAATCTAGTCTCACTCC...CGCAGCGACGCAGACCCCAGCAGGTTCAGTCCCGTGCTGCCACCAGCTGTCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp GGCTTCTGGCCAAGGCAGGACAGGGCGATGCCATTGCAGACCCTCCCACTCCTGGAATTTGAAGTTCCATaGCCCAGCACCTCCAACCCC +
Preference number: 5 (lower is better)
Translates to: GFWPRQDRAMPLQTLPLLEFEVP*PSTSNP
Trigger: GGGGTTGGAGGTGCTGGGCAATGGAACTTCAAATTC...CAGGAGTGGGAGGGTCTGCAATGGCATCGCCCTGTCCTGCCTTGGCCAGAAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp GTAGAAGAGAAGGGTCTGGCGGCACCCAGGGTCACTAGAGTGCAGGTGCAGGCAGACTCCACCAATTGGTaGGCCTACAGGCCTCACCTC +
Preference number: 5 (lower is better)
Translates to: VEEKGLAAPRVTRVQVQADSTNW*AYRPHL
Trigger: GAGGTGAGGCCTGTAGGCCAACCAATTGGTGGAGTC...TGCCTGCACCTGCACTCTAGTGACCCTGGGTGCCGCCAGACCCTTCTCTTCTAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp CGATGCCATTGCAGACCCTCCCACTCCTGCTGGGGTCTTTGTAGAAGAGAAGGGGGATGCTGGGTGATCTaGTTTCCCCCGCAGAGGGCC +
Preference number: 5 (lower is better)
Translates to: RCHCRPSHSCWGLCRREGGCWVI*FPPQRA
Trigger: GGCCCTCTGCGGGGGAAACAAGATCACCCAGCATCC...CCCTTCTCTTCTACAAAGACCCCAGCAGGAGTGGGAGGGTCTGCAATGGCATCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp AAGAGAAGGGTCTGGCGGCACCCAGGGTCACTAGAGTGCAGGTGCAGGCACCAGCTCCTGTCTGTAGCCTaGGAATGTGGGAGGTTCCAG +
Preference number: 5 (lower is better)
Translates to: KRRVWRHPGSLECRCRHQLLSVA*ECGRFQ
Trigger: CTGGAACCTCCCACATTCCAAGGCTACAGACAGGAG...CTGGTGCCTGCACCTGCACTCTAGTGACCCTGGGTGCCGCCAGACCCTTCTCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446688.5
CDS-3UTR CAA 90 bp GTAGAAGAGAAGGGTCTGGCGGCACCCAGGGTCACTAGAGTGCAGGTGCAGGCATTGAAGCGGTGTGTCTaGGGGGCCTCCAGATCCTCT +
Preference number: 5 (lower is better)
Translates to: VEEKGLAAPRVTRVQVQALKRCV*GASRSS
Trigger: AGAGGATCTGGAGGCCCCCAAGACACACCGCTTCAA...TGCCTGCACCTGCACTCTAGTGACCCTGGGTGCCGCCAGACCCTTCTCTTCTAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000646520.1
CDS-3UTR CAA 90 bp CGCAGGGATGCTGGGAGGGAGTTACCAGCTTTCTGGCATGAATGGGTCCTCCCGGAGAAGCTGCAGACTTaGCAGGTGCAGCCTTCCTGG +
Preference number: 5 (lower is better)
Translates to: RRDAGRELPAFWHEWVLPEKLQT*QVQPSW
Trigger: CCAGGAAGGCTGCACCTGCAAAGTCTGCAGCTTCTC...CGGGAGGACCCATTCATGCCAGAAAGCTGGTAACTCCCTCCCAGCATCCCTGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp ACATCCCCAGCACAACGACCAATTAGGCTGGCAGCCACTGAAACCTCAGAACAAGCCTCTGCTTTCTGCTaGGCCGCTCAGCGCCCGGGG +
Preference number: 5 (lower is better)
Translates to: TSPAQRPIRLAATETSEQASAFC*AAQRPG
Trigger: CCCCGGGCGCTGAGCGGCCAAGCAGAAAGCAGAGGC...TTGTTCTGAGGTTTCAGTGGCTGCCAGCCTAATTGGTCGTTGTGCTGGGGATGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453356.1
CDS GCA 90 bp GGCAGAGACTTTGAAGTGAACGATGGTGGCAGCTGGCGTGGGGTCTaGAGCCAACGTCTCAGATGTGGCTTTAGAGATGGCCTGTGGCCC +
Preference number: 5 (lower is better)
Translates to: GRDFEVNDGGSWRGV*SQRLRCGFRDGLWP
Trigger: GGGCCACAGGCCATCTCTAAAGCCACATCTGAGACGTTGGCTGCAGACCCCACGCCAGCTGCCACCATCGTTCACTTCAAAGTCTCTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000480416.1
ENST00000490566.1
ENST00000611415.4
ENST00000615025.5
ENST00000646520.1
ENST00000651849.1
ENST00000682258.1
CDS-3UTR CAA 90 bp ATGTCCCACGGTGGCTCTGTTTGGTTTGACAACCTACCCCACAGGTGGCCAGAAGGCACCAGCTCATGGTaGGATGGAGGAACGCAGGGG +
Preference number: 5 (lower is better)
Translates to: MSHGGSVWFDNLPHRWPEGTSSW*DGGTQG
Trigger: CCCCTGCGTTCCTCCATCCAACCATGAGCTGGTGCC...TTCTGGCCACCTGTGGGGTAGGTTGTCAAACCAAACAGAGCCACCGTGGGACAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp GTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCATGGGTCCCCTCCCCACAAGGCCACCTCACGGAGGTaGCTCCGGAAGTTCTCCTCA +
Preference number: 5 (lower is better)
Translates to: VLLLGSRVVRIHGSPPHKATSRR*LRKFSS
Trigger: TGAGGAGAACTTCCGGAGCAACCTCCGTGAGGTGGC...CTTGTGGGGAGGGGACCCATGAATCCTGACCACTCTTGAACCCAGAAGGAGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp GAGAAGGGTCTGGCGGCACCCAGGGTCACTAGAGTGCAGGTGCAGGCACCAGGACTGCCTCGGTTTCCCTaGTTGTGTAGAACAACGACA +
Preference number: 5 (lower is better)
Translates to: EKGLAAPRVTRVQVQAPGLPRFP*LCRTTT
Trigger: TGTCGTTGTTCTACACAACAAGGGAAACCGAGGCAG...TCCTGGTGCCTGCACCTGCACTCTAGTGACCCTGGGTGCCGCCAGACCCTTCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp TGCAGGCACCAGGAGAGAGCCTCTGTCACCCATAGCTTGGTTGTTTGTCCCTCCACAGGCTCGTCGGTCTaGTCGGTCTTGGTGGAGGCT +
Preference number: 5 (lower is better)
Translates to: CRHQERASVTHSLVVCPSTGSSV*SVLVEA
Trigger: AGCCTCCACCAAGACCGACAAGACCGACGAGCCTGT...GGAGGGACAAACAACCAAGCTATGGGTGACAGAGGCTCTCTCCTGGTGCCTGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp ATGTCCCACGGTGGCTCTGTTTGGTTTGACAACCTACCCCACAGGTGGCCAGAAGACTTGTCCAGACCGTaGGTCAGTGGGGACAGGGCC +
Preference number: 5 (lower is better)
Translates to: MSHGGSVWFDNLPHRWPEDLSRP*VSGDRA
Trigger: GGCCCTGTCCCCACTGACCAACGGTCTGGACAAGTC...TTCTGGCCACCTGTGGGGTAGGTTGTCAAACCAAACAGAGCCACCGTGGGACAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp CCTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCCTCCGACTTGTCCAGACCGTaGGTCAGTGGGGACAGGGCC +
Preference number: 5 (lower is better)
Translates to: PLPTLHFLLSSEIGPKSSDLSRP*VSGDRA
Trigger: GGCCCTGTCCCCACTGACCAACGGTCTGGACAAGTC...GGAGGACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp ATGTCCCACGGTGGCTCTGTTTGGTTTGACAACCTACCCCACAGGTGGCCAGAAGGCCGCCCTCCAGGATaGAGAGCGATGGTAAGAGCC +
Preference number: 5 (lower is better)
Translates to: MSHGGSVWFDNLPHRWPEGRPPG*RAMVRA
Trigger: GGCTCTTACCATCGCTCTCAATCCTGGAGGGCGGCC...TTCTGGCCACCTGTGGGGTAGGTTGTCAAACCAAACAGAGCCACCGTGGGACAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp GTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCATGGGTCCCCTCCCCACAAGTGCAAATGGGGCTCTTaGGGCCGCCCTCCAGGATTG +
Preference number: 5 (lower is better)
Translates to: VLLLGSRVVRIHGSPPHKCKWGS*GRPPGL
Trigger: CAATCCTGGAGGGCGGCCCAAAGAGCCCCATTTGCA...CTTGTGGGGAGGGGACCCATGAATCCTGACCACTCTTGAACCCAGAAGGAGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp GTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCATGGGTCCCCTCCCCACAAGGGACTAGGGGGAGTGTaGGTGCCCACTGTTCTGTGG +
Preference number: 5 (lower is better)
Translates to: VLLLGSRVVRIHGSPPHKGLGGV*VPTVLW
Trigger: CCACAGAACAGTGGGCACCAACACTCCCCCTAGTCC...CTTGTGGGGAGGGGACCCATGAATCCTGACCACTCTTGAACCCAGAAGGAGGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp GGGCGATGCCATTGCAGACCCTCCCACTCCTGCTGGGGTCTTTGTAGAAGAGAAGGACTAGGGGGAGTGTaGGTGCCCACTGTTCTGTGG +
Preference number: 5 (lower is better)
Translates to: GRCHCRPSHSCWGLCRREGLGGV*VPTVLW
Trigger: CCACAGAACAGTGGGCACCAACACTCCCCCTAGTCC...TTCTCTTCTACAAAGACCCCAGCAGGAGTGGGAGGGTCTGCAATGGCATCGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp CCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGGCAGCCATGCTGGGATaGATGGCCCGCCAGCCGAAG +
Preference number: 5 (lower is better)
Translates to: PRCTFFSPPKLAQSPPSGAAMLG*MARQPK
Trigger: CTTCGGCTGGCGGGCCATCAATCCCAGCATGGCTGC...CCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp TCTGCCCTCTGCTGCATGGGCAGCGTGGCTCAGCTAGGGAAACCAAGGCAGAAAGTGGTGGCCACTTTGTaGTGGAGGCCAGAAACCTGG +
Preference number: 5 (lower is better)
Translates to: SALCCMGSVAQLGKPRQKVVATL*WRPETW
Trigger: CCAGGTTTCTGGCCTCCACAACAAAGTGGCCACCAC...TTTCTGCCTTGGTTTCCCTAGCTGAGCCACGCTGCCCATGCAGCAGAGGGCAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp GGGCGATGCCATTGCAGACCCTCCCACTCCTGCTGGGGTCTTTGTAGAAGAGAAGGGGTGGTGGCCACTTaGTTGTGGAGGCCAGAAACC +
Preference number: 5 (lower is better)
Translates to: GRCHCRPSHSCWGLCRREGVVAT*LWRPET
Trigger: GGTTTCTGGCCTCCACAACAAAGTGGCCACCACCCC...TTCTCTTCTACAAAGACCCCAGCAGGAGTGGGAGGGTCTGCAATGGCATCGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp CCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTGGTGTTGGGCTCCCTaGCCGGAAGGCTGCGGAGTC +
Preference number: 5 (lower is better)
Translates to: PRCTFFSPPKLAQSPPSGWCWAP*PEGCGV
Trigger: GACTCCGCAGCCTTCCGGCAAGGGAGCCCAACACCA...CCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp CTTCCCTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCTGGTGTTGGGCTCCCTaGCCGGAAGGCTGCGGAGTC +
Preference number: 5 (lower is better)
Translates to: LPSPHVALSSLLRNWPKVWCWAP*PEGCGV
Trigger: GACTCCGCAGCCTTCCGGCAAGGGAGCCCAACACCA...GACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGGGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp CCAGAACACCGTGATAGCAGGCTGATCAAACCGCTCACTTCCTCCCTGTTTTCCCTGGCAAGGCTGGTGTaGGGCTCCCTTGCCGGAAGG +
Preference number: 5 (lower is better)
Translates to: PEHRDSRLIKPLTSSLFSLARLV*GSLAGR
Trigger: CCTTCCGGCAAGGGAGCCCAACACCAGCCTTGCCAG...GGAAAACAGGGAGGAAGTGAGCGGTTTGATCAGCCTGCTATCACGGTGTTCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp CTTCCCTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCCTGGCAAGGCTGGTGTaGGGCTCCCTTGCCGGAAGG +
Preference number: 5 (lower is better)
Translates to: LPSPHVALSSLLRNWPKVLARLV*GSLAGR
Trigger: CCTTCCGGCAAGGGAGCCCAACACCAGCCTTGCCAG...GACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGGGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp TCTTCTCCCAGACCCTTTCCCATCCCAGCCCATGTTCAAGGCCAGACAGCGCTCACAGCGATCCGAAGTTaGGCTCATTGGGGCAGCCCT +
Preference number: 5 (lower is better)
Translates to: SSPRPFPIPAHVQGQTALTAIRS*AHWGSP
Trigger: AGGGCTGCCCCAATGAGCCAAACTTCGGATCGCTGT...GAGCGCTGTCTGGCCTTGAACATGGGCTGGGATGGGAAAGGGTCTGGGAGAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp ATTGGTTGGCCTACAGGCCTCACCTCCCGACTCCCCTCACTGCTGGGCGACATTATTGCAGGCTGCCCCTaGTTTCAGCAGGTCTGCAGT +
Preference number: 5 (lower is better)
Translates to: IGWPTGLTSRLPSLLGDIIAGCP*FQQVCS
Trigger: ACTGCAGACCTGCTGAAACAAGGGGCAGCCTGCAAT...AATGTCGCCCAGCAGTGAGGGGAGTCGGGAGGTGAGGCCTGTAGGCCAACCAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp CTTCCCTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCAAGAGGTGGCAGGCGTaGTCCGTGGTGCTGCCCTGC +
Preference number: 5 (lower is better)
Translates to: LPSPHVALSSLLRNWPKVKRWQA*SVVLPC
Trigger: GCAGGGCAGCACCACGGACAACGCCTGCCACCTCTT...GACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGGGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp CCAAGGCAGGACAGGGCGATGCCATTGCAGACCCTCCCACTCCTGCTGGGGTCTTTCTCTCCTCCGAAATaGGCCCAAAGTCCTCCTTCT +
Preference number: 5 (lower is better)
Translates to: PRQDRAMPLQTLPLLLGSFSPPK*AQSPPS
Trigger: AGAAGGAGGACTTTGGGCCAATTTCGGAGGAGAGAA...AGACCCCAGCAGGAGTGGGAGGGTCTGCAATGGCATCGCCCTGTCCTGCCTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp GTGAGGAAGGGAAAAGCGACCGTGAAAGCTGACCCCAGACTCAGTCCTGGGCCCTTCCCTCTCCCCACGTaGCACTTTCTTCTCTCCTCC +
Preference number: 5 (lower is better)
Translates to: VRKGKATVKADPRLSPGPFPLPT*HFLLSS
Trigger: GGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGGGAA...GGGCCCAGGACTGAGTCTGGGGTCAGCTTTCACGGTCGCTTTTCCCTTCCTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp CCTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCCTCCGCTGAGCCACATGCCTaGGGGAAGACACCCCGAGCT +
Preference number: 5 (lower is better)
Translates to: PLPTLHFLLSSEIGPKSSAEPHA*GKTPRA
Trigger: AGCTCGGGGTGTCTTCCCCAAGGCATGTGGCTCAGC...GGAGGACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp GTGAGGAAGGGAAAAGCGACCGTGAAAGCTGACCCCAGACTCAGTCCTGGGCCCGATTGGGTGTCTGCCTaGACTCACAGGATCTCCCCA +
Preference number: 5 (lower is better)
Translates to: VRKGKATVKADPRLSPGPDWVSA*THRISP
Trigger: TGGGGAGATCCTGTGAGTCAAGGCAGACACCCAATC...GGGCCCAGGACTGAGTCTGGGGTCAGCTTTCACGGTCGCTTTTCCCTTCCTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp TCTGCCCTCTGCTGCATGGGCAGCGTGGCTCAGCTAGGGAAACCAAGGCAGAAAGACTCCACCAATTGGTaGGCCTACAGGCCTCACCTC +
Preference number: 5 (lower is better)
Translates to: SALCCMGSVAQLGKPRQKDSTNW*AYRPHL
Trigger: GAGGTGAGGCCTGTAGGCCAACCAATTGGTGGAGTC...TTTCTGCCTTGGTTTCCCTAGCTGAGCCACGCTGCCCATGCAGCAGAGGGCAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS GCA 90 bp AGCACCATGGAAGGTGCAGGCAGAGACTGGGGTGATGCGTCTACATaGCAAGGGACACCAAGGATGCTGGCAGCCACAAGAAACTGGGAG +
Preference number: 5 (lower is better)
Translates to: STMEGAGRDWGDAST*QGTPRMLAATRNWE
Trigger: CTCCCAGTTTCTTGTGGCTGCCAGCATCCTTGGTGTCCCTTGGCATGTAGACGCATCACCCCAGTCTCTGCCTGCACCTTCCATGGTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495556.1
CDS CCA 90 bp CTCAGCAAGTATTCTTGGTCCAGCCCTTTGCAGGTGCAGCCTTCCTaGGTGATGACCTGGCGGCAGATCCCACAGGGCTTCACCTTCTTG +
Preference number: 5 (lower is better)
Translates to: LSKYSWSSPLQVQPS*VMTWRQIPQGFTFL
Trigger: CAAGAAGGTGAAGCCCTGTGGGATCTGCCGCCAGGTCATCACCCAGGAAGGCTGCACCTGCAAAGGGCTGGACCAAGAATACTTGCTGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465306.1
CDS-3UTR CAA 90 bp GCAGACCCTCCCACTCCTGCTGGGGTCTTTGTAGAAGAGAAGGGTCTGGCGGCAGGCTTGTTGTTCATTTaGATGGAGCCGGAGAGCAGG +
Preference number: 5 (lower is better)
Translates to: ADPPTPAGVFVEEKGLAAGLLFI*MEPESR
Trigger: CCTGCTCTCCGGCTCCATCAAAATGAACAACAAGCC...TGCCGCCAGACCCTTCTCTTCTACAAAGACCCCAGCAGGAGTGGGAGGGTCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp CCTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCCTCCACAGGCTCGTCGGTCTaGTCGGTCTTGGTGGAGGCT +
Preference number: 5 (lower is better)
Translates to: PLPTLHFLLSSEIGPKSSTGSSV*SVLVEA
Trigger: AGCCTCCACCAAGACCGACAAGACCGACGAGCCTGT...GGAGGACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp CCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGGGCCGCCCTCCAGGATaGAGAGCGATGGTAAGAGCC +
Preference number: 5 (lower is better)
Translates to: PRCTFFSPPKLAQSPPSGGRPPG*RAMVRA
Trigger: GGCTCTTACCATCGCTCTCAATCCTGGAGGGCGGCC...CCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp GTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCATGGGTCCCCTCCCCACAAGGTGGTGGCCACTTTGTaGTGGAGGCCAGAAACCTGG +
Preference number: 5 (lower is better)
Translates to: VLLLGSRVVRIHGSPPHKVVATL*WRPETW
Trigger: CCAGGTTTCTGGCCTCCACAACAAAGTGGCCACCAC...CTTGTGGGGAGGGGACCCATGAATCCTGACCACTCTTGAACCCAGAAGGAGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp ATGCGCACACACGTCCTGTGTTACCACTGGCCAAGGAAACGCGAGTCTCAGGATGGGGTGGTGGCCACTTaGTTGTGGAGGCCAGAAACC +
Preference number: 5 (lower is better)
Translates to: MRTHVLCYHWPRKRESQDGVVAT*LWRPET
Trigger: GGTTTCTGGCCTCCACAACAAAGTGGCCACCACCCC...ATCCTGAGACTCGCGTTTCCTTGGCCAGTGGTAACACAGGACGTGTGTGCGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp TCTGCAATTCACTTCCCTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGAGGCCAGGTTGCCTaGGTGAGCCCCAGGGTGCCG +
Preference number: 5 (lower is better)
Translates to: SAIHFPLPTLHFLLSSEIGGQVA*VSPRVP
Trigger: CGGCACCCTGGGGCTCACCAAGGCAACCTGGCCTCC...AATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGGGAAGTGAATTGCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp ACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGAGGCCAGGTTGCCTaGGTGAGCCCCAGGGTGCCG +
Preference number: 5 (lower is better)
Translates to: TFFSPPKLAQSPPSGFKSGGQVA*VSPRVP
Trigger: CGGCACCCTGGGGCTCACCAAGGCAACCTGGCCTCC...ACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp CACATGCGCACACACGTCCTGTGTTACCACTGGCCAAGGAAACGCGAGTCTCAGACAGCGATCCGAAGTTaGGCTCATTGGGGCAGCCCT +
Preference number: 5 (lower is better)
Translates to: HMRTHVLCYHWPRKRESQTAIRS*AHWGSP
Trigger: AGGGCTGCCCCAATGAGCCAAACTTCGGATCGCTGT...CTGAGACTCGCGTTTCCTTGGCCAGTGGTAACACAGGACGTGTGTGCGCATGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp GGGCGATGCCATTGCAGACCCTCCCACTCCTGCTGGGGTCTTTGTAGAAGAGAAAGGTCTGCAGTTGAGTaGGCAGGGCCGGAGCTATCT +
Preference number: 5 (lower is better)
Translates to: GRCHCRPSHSCWGLCRRERSAVE*AGPELS
Trigger: AGATAGCTCCGGCCCTGCCAACTCAACTGCAGACCT...TTCTCTTCTACAAAGACCCCAGCAGGAGTGGGAGGGTCTGCAATGGCATCGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp GGCTTCTGGCCAAGGCAGGACAGGGCGATGCCATTGCAGACCCTCCCACTCCTGAAGAGCTTTCTCTGGTaGTCAGTCAGAGTGATTCCC +
Preference number: 5 (lower is better)
Translates to: GFWPRQDRAMPLQTLPLLKSFLW*SVRVIP
Trigger: GGGAATCACTCTGACTGACAACCAGAGAAAGCTCTT...CAGGAGTGGGAGGGTCTGCAATGGCATCGCCCTGTCCTGCCTTGGCCAGAAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp GCAATTCACTTCCCTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCAAGAGGTGGCAGGCGTaGTCCGTGGTGCTGCCCTGC +
Preference number: 5 (lower is better)
Translates to: AIHFPLPTLHFLLSSEIGKRWQA*SVVLPC
Trigger: GCAGGGCAGCACCACGGACAACGCCTGCCACCTCTT...GCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGGGAAGTGAATTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp AATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCATGGGTCCAAGAGGTGGCAGGCGTaGTCCGTGGTGCTGCCCTGC +
Preference number: 5 (lower is better)
Translates to: NWPKVLLLGSRVVRIHGSKRWQA*SVVLPC
Trigger: GCAGGGCAGCACCACGGACAACGCCTGCCACCTCTT...GGACCCATGAATCCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp ACCCTCCTTTCCAACTCCCTGAAACAGAACGTCCACACTGACACAGCTCCTTGGGCAGAGGCCGGCTGGTaGGGGTCAAGCTCAGCAAAG +
Preference number: 5 (lower is better)
Translates to: TLLSNSLKQNVHTDTAPWAEAGW*GSSSAK
Trigger: CTTTGCTGAGCTTGACCCCAACCAGCCGGCCTCTGC...CCAAGGAGCTGTGTCAGTGTGGACGTTCTGTTTCAGGGAGTTGGAAAGGAGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp CCCAACTGTCCAGTGGACCTTAGGCCCTTTGGCCCAAGTGCAAGCCTTCTGCCCCAGGGTTCATCTCTTTaGGCCGGCATTCAGCATGAC +
Preference number: 5 (lower is better)
Translates to: PNCPVDLRPFGPSASLLPQGSSL*AGIQHD
Trigger: GTCATGCTGAATGCCGGCCAAAAGAGATGAACCCTG...GGGCAGAAGGCTTGCACTTGGGCCAAAGGGCCTAAGGTCCACTGGACAGTTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp GAGAAGGGTCTGGCGGCACCCAGGGTCACTAGAGTGCAGGTGCAGGCACCAGGATGGACCTGGTTAGTTTaGGAGGCTTTGGGTTTTTGC +
Preference number: 5 (lower is better)
Translates to: EKGLAAPRVTRVQVQAPGWTWLV*EALGFC
Trigger: GCAAAAACCCAAAGCCTCCAAAACTAACCAGGTCCA...TCCTGGTGCCTGCACCTGCACTCTAGTGACCCTGGGTGCCGCCAGACCCTTCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp CGCAGGGATGCTGGGAGGGAGTTACCAGCTTTCTGGCATGAATGGGTCCTCCCGGTGGCTCTGTTTGGTTaGACAACCTACCCCACAGGT +
Preference number: 5 (lower is better)
Translates to: RRDAGRELPAFWHEWVLPVALFG*TTYPTG
Trigger: ACCTGTGGGGTAGGTTGTCAAACCAAACAGAGCCAC...CGGGAGGACCCATTCATGCCAGAAAGCTGGTAACTCCCTCCCAGCATCCCTGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp GCAGACCCTCCCACTCCTGCTGGGGTCTTTGTAGAAGAGAAGGGTCTGGCGGCAGTGGCTCTGTTTGGTTaGACAACCTACCCCACAGGT +
Preference number: 5 (lower is better)
Translates to: ADPPTPAGVFVEEKGLAAVALFG*TTYPTG
Trigger: ACCTGTGGGGTAGGTTGTCAAACCAAACAGAGCCAC...TGCCGCCAGACCCTTCTCTTCTACAAAGACCCCAGCAGGAGTGGGAGGGTCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp CCCAACTGTCCAGTGGACCTTAGGCCCTTTGGCCCAAGTGCAAGCCTTCTGCCCTCTGTCACCCATAGCTaGGTTGTTTGTCCCTCCCCT +
Preference number: 5 (lower is better)
Translates to: PNCPVDLRPFGPSASLLPSVTHS*VVCPSP
Trigger: AGGGGAGGGACAAACAACCAAGCTATGGGTGACAGA...GGGCAGAAGGCTTGCACTTGGGCCAAAGGGCCTAAGGTCCACTGGACAGTTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp GTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCATGGGTCCCCTCCCCACAAGCCCAGCAGGAGCAACTaGCCTTTCTTGCTGCTGAGC +
Preference number: 5 (lower is better)
Translates to: VLLLGSRVVRIHGSPPHKPSRSN*PFLLLS
Trigger: GCTCAGCAGCAAGAAAGGCAAGTTGCTCCTGCTGGG...CTTGTGGGGAGGGGACCCATGAATCCTGACCACTCTTGAACCCAGAAGGAGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp CACATGCGCACACACGTCCTGTGTTACCACTGGCCAAGGAAACGCGAGTCTCAGCCCAGCAGGAGCAACTaGCCTTTCTTGCTGCTGAGC +
Preference number: 5 (lower is better)
Translates to: HMRTHVLCYHWPRKRESQPSRSN*PFLLLS
Trigger: GCTCAGCAGCAAGAAAGGCAAGTTGCTCCTGCTGGG...CTGAGACTCGCGTTTCCTTGGCCAGTGGTAACACAGGACGTGTGTGCGCATGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp GTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCATGGGTCCCCTCCCCACAAGTGGACCTTAGGCCCTTaGGCCCAAGTGCAAGCCTTC +
Preference number: 5 (lower is better)
Translates to: VLLLGSRVVRIHGSPPHKWTLGP*AQVQAF
Trigger: GAAGGCTTGCACTTGGGCCAAAGGGCCTAAGGTCCA...CTTGTGGGGAGGGGACCCATGAATCCTGACCACTCTTGAACCCAGAAGGAGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp GAGAAGGGTCTGGCGGCACCCAGGGTCACTAGAGTGCAGGTGCAGGCACCAGGATCCCCATCATTCGCCTaGAAAAGTCACACTCTCAGA +
Preference number: 5 (lower is better)
Translates to: EKGLAAPRVTRVQVQAPGSPSFA*KSHTLR
Trigger: TCTGAGAGTGTGACTTTTCAAGGCGAATGATGGGGA...TCCTGGTGCCTGCACCTGCACTCTAGTGACCCTGGGTGCCGCCAGACCCTTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp ATTGGTTGGCCTACAGGCCTCACCTCCCGACTCCCCTCACTGCTGGGCGACATTCCCAATCCTTCCCTCTaGCTCCCTTTGGGAAAAAGC +
Preference number: 5 (lower is better)
Translates to: IGWPTGLTSRLPSLLGDIPNPSL*LPLGKS
Trigger: GCTTTTTCCCAAAGGGAGCAAGAGGGAAGGATTGGG...AATGTCGCCCAGCAGTGAGGGGAGTCGGGAGGTGAGGCCTGTAGGCCAACCAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp GTAGAAGAGAAGGGTCTGGCGGCACCCAGGGTCACTAGAGTGCAGGTGCAGGCACAGGTCCCCTCTCCATaGTTTTCTCGCCCAATCCTT +
Preference number: 5 (lower is better)
Translates to: VEEKGLAAPRVTRVQVQAQVPSP*FSRPIL
Trigger: AAGGATTGGGCGAGAAAACAATGGAGAGGGGACCTG...TGCCTGCACCTGCACTCTAGTGACCCTGGGTGCCGCCAGACCCTTCTCTTCTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp GTAGAAGAGAAGGGTCTGGCGGCACCCAGGGTCACTAGAGTGCAGGTGCAGGCAGAATTTGAAGTTCCATaGCCCAGCACCTCCAACCCC +
Preference number: 5 (lower is better)
Translates to: VEEKGLAAPRVTRVQVQAEFEVP*PSTSNP
Trigger: GGGGTTGGAGGTGCTGGGCAATGGAACTTCAAATTC...TGCCTGCACCTGCACTCTAGTGACCCTGGGTGCCGCCAGACCCTTCTCTTCTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp TGCAGGCACCAGGAGAGAGCCTCTGTCACCCATAGCTTGGTTGTTTGTCCCTCCGACTCCACCAATTGGTaGGCCTACAGGCCTCACCTC +
Preference number: 5 (lower is better)
Translates to: CRHQERASVTHSLVVCPSDSTNW*AYRPHL
Trigger: GAGGTGAGGCCTGTAGGCCAACCAATTGGTGGAGTC...GGAGGGACAAACAACCAAGCTATGGGTGACAGAGGCTCTCTCCTGGTGCCTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp CGATGCCATTGCAGACCCTCCCACTCCTGCTGGGGTCTTTGTAGAAGAGAAGGGGAGAAGCTGCAGACTTaGCAGGTGCAGCCTTCCTGG +
Preference number: 5 (lower is better)
Translates to: RCHCRPSHSCWGLCRREGEKLQT*QVQPSW
Trigger: CCAGGAAGGCTGCACCTGCAAAGTCTGCAGCTTCTC...CCCTTCTCTTCTACAAAGACCCCAGCAGGAGTGGGAGGGTCTGCAATGGCATCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp TCTCCTGGCCAGTCTCAGAAGACCCAGGGATCCTCAAAAACCAGGGGAGAAGGAGGCCGCTGGGAGGATTaGAGCTGTCCACTAGAGGCA +
Preference number: 5 (lower is better)
Translates to: SPGQSQKTQGSSKTRGEGGRWED*SCPLEA
Trigger: TGCCTCTAGTGGACAGCTCAAATCCTCCCAGCGGCC...TCCTTCTCCCCTGGTTTTTGAGGATCCCTGGGTCTTCTGAGACTGGCCAGGAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000646520.1
CDS TCA 90 bp CAGCAGGGGGCAGTGATGCAGTCTCCCGTAGACTCATCCAAGCACTaGAGCAATCCTGCTTCCAGGGCCAAGAACAGCACATGCCTTCCT +
Preference number: 5 (lower is better)
Translates to: QQGAVMQSPVDSSKH*SNPASRAKNSTCLP
Trigger: AGGAAGGCATGTGCTGTTCTTGGCCCTGGAAGCAGGATTGCTTCAGTGCTTGGATGAGTCTACGGGAGACTGCATCACTGCCCCCTGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000492338.2
CDS GCA 90 bp GCCGACAGTGTAGGACGTGTGGCATTAACAGCCCCGGTGCTGCCGTaGAGGGAGTCTTTCTTCTTCACCTTAGCATACAGGCTCCCATCT +
Preference number: 5 (lower is better)
Translates to: ADSVGRVALTAPVLP*RESFFFTLAYRLPS
Trigger: AGATGGGAGCCTGTATGCTAAGGTGAAGAAGAAAGACTCCCTGCACGGCAGCACCGGGGCTGTTAATGCCACACGTCCTACACTGTCGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000171887.8
ENST00000413554.5
ENST00000419504.5
ENST00000430930.5
ENST00000446903.5
ENST00000479185.1
ENST00000480665.1
ENST00000611415.4
ENST00000615025.5
ENST00000646520.1
ENST00000651849.1
ENST00000682258.1
CDS GCA 90 bp CATATTGAGTGTTTCGATGGACTGTTCAATCTCCTGCTGGGAGGCTaGTCGCGGGAACTCAGGGAGACTGGGGATGGGGGTCTCTGCCAA +
Preference number: 5 (lower is better)
Translates to: HIECFDGLFNLLLGG*SRELRETGDGGLCQ
Trigger: TTGGCAGAGACCCCCATCCCCAGTCTCCCTGAGTTCCCGCGAGCAGCCTCCCAGCAGGAGATTGAACAGTCCATCGAAACACTCAATATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000615025.5
ENST00000646520.1
ENST00000651849.1
ENST00000682258.1
CDS GCA 90 bp TCCAGCATCAGCATATTGAGTGTTTCGATGGACTGTTCAATCTCCTaGTGGGAGGCTGCTCGCGGGAACTCAGGGAGACTGGGGATGGGG +
Preference number: 5 (lower is better)
Translates to: SSISILSVSMDCSIS*WEAARGNSGRLGMG
Trigger: CCCCATCCCCAGTCTCCCTGAGTTCCCGCGAGCAGCCTCCCAGCAGGAGATTGAACAGTCCATCGAAACACTCAATATGCTGATGCTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000615025.5
ENST00000646520.1
ENST00000651849.1
ENST00000682258.1
CDS GCA 90 bp AGGGGGCAGCCACCTTGGCCTGGCATTTCCGATGACAGGAGAAGCTaGAGACTGCAAGAGGGCGAGACACAGAAAGAAAGTTTTAGCCGC +
Preference number: 5 (lower is better)
Translates to: RGQPPWPGISDDRRS*RLQEGETQKESFSR
Trigger: GCGGCTAAAACTTTCTTTCTGTGTCTCGCCCTCTTGCAGTCTGCAGCTTCTCCTGTCATCGGAAATGCCAGGCCAAGGTGGCTGCCCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000413280.5
CDS GCA 90 bp TCTCCCGAGCCTGTACCCCTTTCCTCTCCTTCACAAGCTGCTCCATaGCAGTTCCTATGCTGGTTCCCTCCTCCTGTCTGTAGCCTTGGA +
Preference number: 5 (lower is better)
Translates to: SPEPVPLSSPSQAAP*QFLCWFPPPVCSLG
Trigger: TCCAAGGCTACAGACAGGAGGAGGGAACCAGCATAGGAACTGGCATGGAGCAGCTTGTGAAGGAGAGGAAAGGGGTACAGGCTCGGGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446688.5
CDS GCA 90 bp CAGCCACTGAAACCTCAGAACAAATTCGCTCCAGCCTCTGCTTTCTaGTTGGCCGCTCAGCGCCCGGGGATGGAGGAGTGCTTTTCACAA +
Preference number: 5 (lower is better)
Translates to: QPLKPQNKFAPASAF*LAAQRPGMEECFSQ
Trigger: TTGTGAAAAGCACTCCTCCATCCCCGGGCGCTGAGCGGCCAAGCAGAAAGCAGAGGCTGGAGCGAATTTGTTCTGAGGTTTCAGTGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000453356.1
CDS CCA 90 bp GCACATTGCAGGCTGCCCCTTGTTTCAGCAGGTCTGCAGTTGAGTTaGCAGGGCCGGAGCTATCTTTCGATTCATCTGTGGGGTCTCGGT +
Preference number: 5 (lower is better)
Translates to: AHCRLPLVSAGLQLS*QGRSYLSIHLWGLG
Trigger: ACCGAGACCCCACAGATGAATCGAAAGATAGCTCCGGCCCTGCCAACTCAACTGCAGACCTGCTGAAACAAGGGGCAGCCTGCAATGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000490566.1
ENST00000611415.4
ENST00000615025.5
ENST00000646520.1
ENST00000651849.1
ENST00000682258.1
CDS-3UTR CAA 90 bp GTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCATGGGTCCCCTCCCCACAAGCCTCCATGTTTGGACTaGAGCATCTGCGCCACCTCA +
Preference number: 5 (lower is better)
Translates to: VLLLGSRVVRIHGSPPHKPPCLD*SICATS
Trigger: TGAGGTGGCGCAGATGCTCAAGTCCAAACATGGAGG...CTTGTGGGGAGGGGACCCATGAATCCTGACCACTCTTGAACCCAGAAGGAGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp GCAGACCCTCCCACTCCTGCTGGGGTCTTTGTAGAAGAGAAGGGTCTGGCGGCACCAAATTCCAGTACCTaGGCATGGAGCTTCGTGATG +
Preference number: 5 (lower is better)
Translates to: ADPPTPAGVFVEEKGLAAPNSST*AWSFVM
Trigger: CATCACGAAGCTCCATGCCAAGGTACTGGAATTTGG...TGCCGCCAGACCCTTCTCTTCTACAAAGACCCCAGCAGGAGTGGGAGGGTCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp CCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGGTGTGTTCCACGTGGTaGGGGGTGGCCGACAGTGTA +
Preference number: 5 (lower is better)
Translates to: PRCTFFSPPKLAQSPPSGVCSTW*GVADSV
Trigger: TACACTGTCGGCCACCCCCAACCACGTGGAACACAC...CCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp GCAGACCCTCCCACTCCTGCTGGGGTCTTTGTAGAAGAGAAGGGTCTGGCGGCATGTGACCATCCTGGTTaGGCAATTCATCGTCCAGGA +
Preference number: 5 (lower is better)
Translates to: ADPPTPAGVFVEEKGLAACDHPG*AIHRPG
Trigger: TCCTGGACGATGAATTGCCAAACCAGGATGGTCACA...TGCCGCCAGACCCTTCTCTTCTACAAAGACCCCAGCAGGAGTGGGAGGGTCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp GCAATTCACTTCCCTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCGGCCGCCCTCCAGGATaGAGAGCGATGGTAAGAGCC +
Preference number: 5 (lower is better)
Translates to: AIHFPLPTLHFLLSSEIGGRPPG*RAMVRA
Trigger: GGCTCTTACCATCGCTCTCAATCCTGGAGGGCGGCC...GCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGGGAAGTGAATTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp TCTCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGTGCAAATGGGGCTCTTaGGGCCGCCCTCCAGGATTG +
Preference number: 5 (lower is better)
Translates to: SLLRNWPKVLLLGSRVVRCKWGS*GRPPGL
Trigger: CAATCCTGGAGGGCGGCCCAAAGAGCCCCATTTGCA...CCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp CTTCCCTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCTGCAAATGGGGCTCTTaGGGCCGCCCTCCAGGATTG +
Preference number: 5 (lower is better)
Translates to: LPSPHVALSSLLRNWPKVCKWGS*GRPPGL
Trigger: CAATCCTGGAGGGCGGCCCAAAGAGCCCCATTTGCA...GACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp CTTCCCTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCGGACTAGGGGGAGTGTaGGTGCCCACTGTTCTGTGG +
Preference number: 5 (lower is better)
Translates to: LPSPHVALSSLLRNWPKVGLGGV*VPTVLW
Trigger: CCACAGAACAGTGGGCACCAACACTCCCCCTAGTCC...GACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGGGAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp CTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCATGCAGCCATGCTGGGATaGATGGCCCGCCAGCCGAAG +
Preference number: 5 (lower is better)
Translates to: LRNWPKVLLLGSRVVRIHAAMLG*MARQPK
Trigger: CTTCGGCTGGCGGGCCATCAATCCCAGCATGGCTGC...ATGAATCCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp CCCAGCTTGATTTCCCCTTGCAAAGCAGTTGAGTTAGGGAGACAGAGCTTTTCCGCAGCCATGCTGGGATaGATGGCCCGCCAGCCGAAG +
Preference number: 5 (lower is better)
Translates to: PSLISPCKAVELGRQSFSAAMLG*MARQPK
Trigger: CTTCGGCTGGCGGGCCATCAATCCCAGCATGGCTGC...GGAAAAGCTCTGTCTCCCTAACTCAACTGCTTTGCAAGGGGAAATCAAGCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp TGGTCAGGTGTTTTCCCAACTGTCCAGTGGACCTTAGGCCCTTTGGCCCAAGTGGTGGTGGCCACTTTGTaGTGGAGGCCAGAAACCTGG +
Preference number: 5 (lower is better)
Translates to: WSGVFPTVQWTLGPLAQVVVATL*WRPETW
Trigger: CCAGGTTTCTGGCCTCCACAACAAAGTGGCCACCAC...CACTTGGGCCAAAGGGCCTAAGGTCCACTGGACAGTTGGGAAAACACCTGACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp TCTCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGGGGGTGGTGGCCACTTaGTTGTGGAGGCCAGAAACC +
Preference number: 5 (lower is better)
Translates to: SLLRNWPKVLLLGSRVVRGVVAT*LWRPET
Trigger: GGTTTCTGGCCTCCACAACAAAGTGGCCACCACCCC...CCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGAGA
57% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp CACATGCGCACACACGTCCTGTGTTACCACTGGCCAAGGAAACGCGAGTCTCAGTCTGGCATGGAGTACTaGGAGAAGTCGGGCAGAGTG +
Preference number: 5 (lower is better)
Translates to: HMRTHVLCYHWPRKRESQSGMEY*EKSGRV
Trigger: CACTCTGCCCGACTTCTCCAAGTACTCCATGCCAGA...CTGAGACTCGCGTTTCCTTGGCCAGTGGTAACACAGGACGTGTGTGCGCATGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp GAGAAGGGTCTGGCGGCACCCAGGGTCACTAGAGTGCAGGTGCAGGCACCAGGACTGGAGATCTCAGGCTaGTACCAATACTTAGAAGTG +
Preference number: 5 (lower is better)
Translates to: EKGLAAPRVTRVQVQAPGLEISG*YQYLEV
Trigger: CACTTCTAAGTATTGGTACAAGCCTGAGATCTCCAG...TCCTGGTGCCTGCACCTGCACTCTAGTGACCCTGGGTGCCGCCAGACCCTTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp GTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCATGGGTCCCCTCCCCACAAGATTGCAGGCTGCCCCTaGTTTCAGCAGGTCTGCAGT +
Preference number: 5 (lower is better)
Translates to: VLLLGSRVVRIHGSPPHKIAGCP*FQQVCS
Trigger: ACTGCAGACCTGCTGAAACAAGGGGCAGCCTGCAAT...CTTGTGGGGAGGGGACCCATGAATCCTGACCACTCTTGAACCCAGAAGGAGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp ACAGGGCGATGCCATTGCAGACCCTCCCACTCCTGCTGGGGTCTTTGTAGAAGAATTGCAGGCTGCCCCTaGTTTCAGCAGGTCTGCAGT +
Preference number: 5 (lower is better)
Translates to: TGRCHCRPSHSCWGLCRRIAGCP*FQQVCS
Trigger: ACTGCAGACCTGCTGAAACAAGGGGCAGCCTGCAAT...TCTTCTACAAAGACCCCAGCAGGAGTGGGAGGGTCTGCAATGGCATCGCCCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp CGATGCCATTGCAGACCCTCCCACTCCTGCTGGGGTCTTTGTAGAAGAGAAGGGATTGCAGGCTGCCCCTaGTTTCAGCAGGTCTGCAGT +
Preference number: 5 (lower is better)
Translates to: RCHCRPSHSCWGLCRREGIAGCP*FQQVCS
Trigger: ACTGCAGACCTGCTGAAACAAGGGGCAGCCTGCAAT...CCCTTCTCTTCTACAAAGACCCCAGCAGGAGTGGGAGGGTCTGCAATGGCATCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp CCCAACTGTCCAGTGGACCTTAGGCCCTTTGGCCCAAGTGCAAGCCTTCTGCCCTCCATGTCCACAGAGTaGACGAAGAGCACATTGCAG +
Preference number: 5 (lower is better)
Translates to: PNCPVDLRPFGPSASLLPSMSTE*TKSTLQ
Trigger: CTGCAATGTGCTCTTCGTCAACTCTGTGGACATGGA...GGGCAGAAGGCTTGCACTTGGGCCAAAGGGCCTAAGGTCCACTGGACAGTTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp CCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGACCTTGGAGACGAAGTaGACGATGGCAGAGGCCGGC +
Preference number: 5 (lower is better)
Translates to: PRCTFFSPPKLAQSPPSGTLETK*TMAEAG
Trigger: GCCGGCCTCTGCCATCGTCAACTTCGTCTCCAAGGT...CCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp GCAGACCCTCCCACTCCTGCTGGGGTCTTTGTAGAAGAGAAGGGTCTGGCGGCAGCATTCAGCATGACCTaGGAGACGAAGTTGACGATG +
Preference number: 5 (lower is better)
Translates to: ADPPTPAGVFVEEKGLAAAFSMT*ETKLTM
Trigger: CATCGTCAACTTCGTCTCCAAGGTCATGCTGAATGC...TGCCGCCAGACCCTTCTCTTCTACAAAGACCCCAGCAGGAGTGGGAGGGTCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp GCTATCGCTGAGACTCCACCAATTGGTTGGCCTACAGGCCTCACCTCCCGACTCCAGGGTTCATCTCTTTaGGCCGGCATTCAGCATGAC +
Preference number: 5 (lower is better)
Translates to: AIAETPPIGWPTGLTSRLQGSSL*AGIQHD
Trigger: GTCATGCTGAATGCCGGCCAAAAGAGATGAACCCTG...GAGTCGGGAGGTGAGGCCTGTAGGCCAACCAATTGGTGGAGTCTCAGCGATAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp GTAGAAGAGAAGGGTCTGGCGGCACCCAGGGTCACTAGAGTGCAGGTGCAGGCATTCTCTCCTCCGAAATaGGCCCAAAGTCCTCCTTCT +
Preference number: 5 (lower is better)
Translates to: VEEKGLAAPRVTRVQVQAFSPPK*AQSPPS
Trigger: AGAAGGAGGACTTTGGGCCAATTTCGGAGGAGAGAA...TGCCTGCACCTGCACTCTAGTGACCCTGGGTGCCGCCAGACCCTTCTCTTCTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp GTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCATGGGTCCCCTCCCCACAAGTTCCCTCTCCCCACGTaGCACTTTCTTCTCTCCTCC +
Preference number: 5 (lower is better)
Translates to: VLLLGSRVVRIHGSPPHKFPLPT*HFLLSS
Trigger: GGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGGGAA...CTTGTGGGGAGGGGACCCATGAATCCTGACCACTCTTGAACCCAGAAGGAGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp TGCAGGCACCAGGAGAGAGCCTCTGTCACCCATAGCTTGGTTGTTTGTCCCTCCTCACCCATAGCTTGGTaGTTTGTCCCTCCCCTGCTG +
Preference number: 5 (lower is better)
Translates to: CRHQERASVTHSLVVCPSSPIAW*FVPPLL
Trigger: CAGCAGGGGAGGGACAAACAACCAAGCTATGGGTGA...GGAGGGACAAACAACCAAGCTATGGGTGACAGAGGCTCTCTCCTGGTGCCTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp TCTCCTGGCCAGTCTCAGAAGACCCAGGGATCCTCAAAAACCAGGGGAGAAGGATGGACCTTAGGCCCTTaGGCCCAAGTGCAAGCCTTC +
Preference number: 5 (lower is better)
Translates to: SPGQSQKTQGSSKTRGEGWTLGP*AQVQAF
Trigger: GAAGGCTTGCACTTGGGCCAAAGGGCCTAAGGTCCA...TCCTTCTCCCCTGGTTTTTGAGGATCCCTGGGTCTTCTGAGACTGGCCAGGAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp GGGCGATGCCATTGCAGACCCTCCCACTCCTGCTGGGGTCTTTGTAGAAGAGAACTGAGACTCCACCAATaGGTTGGCCTACAGGCCTCA +
Preference number: 5 (lower is better)
Translates to: GRCHCRPSHSCWGLCRRELRLHQ*VGLQAS
Trigger: TGAGGCCTGTAGGCCAACCAATTGGTGGAGTCTCAG...TTCTCTTCTACAAAGACCCCAGCAGGAGTGGGAGGGTCTGCAATGGCATCGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp ATGCGCACACACGTCCTGTGTTACCACTGGCCAAGGAAACGCGAGTCTCAGGATTGGAGAGGCCCCTTTTaGCCCACCAGAGACATGGCA +
Preference number: 5 (lower is better)
Translates to: MRTHVLCYHWPRKRESQDWRGPF*PTRDMA
Trigger: TGCCATGTCTCTGGTGGGCAAAAAGGGGCCTCTCCA...ATCCTGAGACTCGCGTTTCCTTGGCCAGTGGTAACACAGGACGTGTGTGCGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646520.1
CDS TCA 90 bp GAAATCCTGGTTAGGCCCAGCCAAACATGGCTGATAGTCATAAGGTaGGTAAGACCTGCCAGGAGGGACAGACTCCAGAGAGGCCCGTGG +
Preference number: 5 (lower is better)
Translates to: EILVRPSQTWLIVIR*VRPARRDRLQRGPW
Trigger: CCACGGGCCTCTCTGGAGTCTGTCCCTCCTGGCAGGTCTTACTCACCTTATGACTATCAGCCATGTTTGGCTGGGCCTAACCAGGATTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000615025.5
ENST00000646520.1
ENST00000651849.1
ENST00000682258.1
CDS TCA 90 bp ACGCACGTACCTGTGTCAGCTTTGGTACCGTGCTCCATGATTGTCTaGCTGTGTCTGTCTTCCCAGGTAAGGGGCTGGCTCTCAGCACCA +
Preference number: 5 (lower is better)
Translates to: THVPVSALVPCSMIV*LCLSSQVRGWLSAP
Trigger: TGGTGCTGAGAGCCAGCCCCTTACCTGGGAAGACAGACACAGTCAGACAATCATGGAGCACGGTACCAAAGCTGACACAGGTACGTGCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465306.1
CDS TCA 90 bp AGCTACGTGGGATCAGGGACAGCAGGGAAATCACAGCCCCGACATTaGAAGGACATAAAGCCTCCAAAGGGTCATCCCAGGCATGGCCCT +
Preference number: 5 (lower is better)
Translates to: SYVGSGTAGKSQPRH*KDIKPPKGHPRHGP
Trigger: AGGGCCATGCCTGGGATGACCCTTTGGAGGCTTTATGTCCTTTCAATGTCGGGGCTGTGATTTCCCTGCTGTCCCTGATCCCACGTAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479185.1
CDS CCA 90 bp CCCCTTTCCTCTCCTTCACAAGCTGCTCCATGCCAGTTCCTATGCTaGTTCCCTCCTCCTGTCTGTAGCCTTGGAATGTGGGAGGTTCCA +
Preference number: 5 (lower is better)
Translates to: PLSSPSQAAPCQFLC*FPPPVCSLGMWEVP
Trigger: TGGAACCTCCCACATTCCAAGGCTACAGACAGGAGGAGGGAACCAGCATAGGAACTGGCATGGAGCAGCTTGTGAAGGAGAGGAAAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446688.5
CDS CCA 90 bp CCGACATTGAAAGGACATAAAGCCTCCAAAGGGTCATCCCAGGCATaGCCCTGCCCCCTCTTAAAACGCTCTCCGCTCCAGACAGAAACC +
Preference number: 5 (lower is better)
Translates to: PTLKGHKASKGSSQA*PCPLLKRSPLQTET
Trigger: GGTTTCTGTCTGGAGCGGAGAGCGTTTTAAGAGGGGGCAGGGCCATGCCTGGGATGACCCTTTGGAGGCTTTATGTCCTTTCAATGTCGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000479185.1
CDS-3UTR CAA 90 bp AATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCATGGGTCCACCCTGGTGGAGCCGTaGTCCTCGAGGCTTTTCCGT +
Preference number: 5 (lower is better)
Translates to: NWPKVLLLGSRVVRIHGSTLVEP*SSRLFR
Trigger: ACGGAAAAGCCTCGAGGACAACGGCTCCACCAGGGT...GGACCCATGAATCCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp GACAGGAGCCCCAACATGAAGTTCTCAGTGCAAAGCTTTGGATTCTGGCTTGGCGCCACCTCACGGAGGTaGCTCCGGAAGTTCTCCTCA +
Preference number: 5 (lower is better)
Translates to: DRSPNMKFSVQSFGFWLGATSRR*LRKFSS
Trigger: TGAGGAGAACTTCCGGAGCAACCTCCGTGAGGTGGC...GCCAAGCCAGAATCCAAAGCTTTGCACTGAGAACTTCATGTTGGGGCTCCTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310858.10
CDS-3UTR CAA 90 bp GCAATTCACTTCCCTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCGCCACCTCACGGAGGTaGCTCCGGAAGTTCTCCTCA +
Preference number: 5 (lower is better)
Translates to: AIHFPLPTLHFLLSSEIGATSRR*LRKFSS
Trigger: TGAGGAGAACTTCCGGAGCAACCTCCGTGAGGTGGC...GCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGGGAAGTGAATTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp ATGTCCCACGGTGGCTCTGTTTGGTTTGACAACCTACCCCACAGGTGGCCAGAAATGCACGTACCTTCTTaGGGATGGCTGGCCAATGGG +
Preference number: 5 (lower is better)
Translates to: MSHGGSVWFDNLPHRWPEMHVPS*GWLANG
Trigger: CCCATTGGCCAGCCATCCCAAAGAAGGTACGTGCAT...TTCTGGCCACCTGTGGGGTAGGTTGTCAAACCAAACAGAGCCACCGTGGGACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp GGCTTCTGGCCAAGGCAGGACAGGGCGATGCCATTGCAGACCCTCCCACTCCTGGGAAATCGATCATCTTaGAAAGCATCATCAAGGTCC +
Preference number: 5 (lower is better)
Translates to: GFWPRQDRAMPLQTLPLLGNRSS*KASSRS
Trigger: GGACCTTGATGATGCTTTCAAAGATGATCGATTTCC...CAGGAGTGGGAGGGTCTGCAATGGCATCGCCCTGTCCTGCCTTGGCCAGAAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp TCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATGGGGTGGTGGCCACTTaGTTGTGGAGGCCAGAAACC +
Preference number: 5 (lower is better)
Translates to: SPPKLAQSPPSGFKSGQDGVVAT*LWRPET
Trigger: GGTTTCTGGCCTCCACAACAAAGTGGCCACCACCCC...ATCCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp TTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTCTCCTCCATCTTTCGGAGGCCAGGTTGCCTaGGTGAGCCCCAGGGTGCCG +
Preference number: 5 (lower is better)
Translates to: FLQFPSTQGNPSSSPPSFGGQVA*VSPRVP
Trigger: CGGCACCCTGGGGCTCACCAAGGCAACCTGGCCTCC...GAAAGATGGAGGAGAAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp GATCTAGATCAATGTGTGAGGATGTGGGTGCAGACACACACCCACACGACAATATGGTGTTGGGCTCCCTaGCCGGAAGGCTGCGGAGTC +
Preference number: 5 (lower is better)
Translates to: DLDQCVRMWVQTHTHTTIWCWAP*PEGCGV
Trigger: GACTCCGCAGCCTTCCGGCAAGGGAGCCCAACACCA...TATTGTCGTGTGGGTGTGTGTCTGCACCCACATCCTCACACATTGATCTAGATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp CCTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCCTCCTCTGGCATGGAGTACTaGGAGAAGTCGGGCAGAGTG +
Preference number: 5 (lower is better)
Translates to: PLPTLHFLLSSEIGPKSSSGMEY*EKSGRV
Trigger: CACTCTGCCCGACTTCTCCAAGTACTCCATGCCAGA...GGAGGACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp CCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGACAGCGATCCGAAGTTaGGCTCATTGGGGCAGCCCT +
Preference number: 5 (lower is better)
Translates to: PRCTFFSPPKLAQSPPSGTAIRS*AHWGSP
Trigger: AGGGCTGCCCCAATGAGCCAAACTTCGGATCGCTGT...CCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp TCTCCTGGCCAGTCTCAGAAGACCCAGGGATCCTCAAAAACCAGGGGAGAAGGATTTGGAATGACCAGCTaGCAAGGCAGGGCCAATGGG +
Preference number: 5 (lower is better)
Translates to: SPGQSQKTQGSSKTRGEGFGMTS*QGRANG
Trigger: CCCATTGGCCCTGCCTTGCAAGCTGGTCATTCCAAA...TCCTTCTCCCCTGGTTTTTGAGGATCCCTGGGTCTTCTGAGACTGGCCAGGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp ATGTCCCACGGTGGCTCTGTTTGGTTTGACAACCTACCCCACAGGTGGCCAGAATTTGGAATGACCAGCTaGCAAGGCAGGGCCAATGGG +
Preference number: 5 (lower is better)
Translates to: MSHGGSVWFDNLPHRWPEFGMTS*QGRANG
Trigger: CCCATTGGCCCTGCCTTGCAAGCTGGTCATTCCAAA...TTCTGGCCACCTGTGGGGTAGGTTGTCAAACCAAACAGAGCCACCGTGGGACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp CCCAGCTTGATTTCCCCTTGCAAAGCAGTTGAGTTAGGGAGACAGAGCTTTTCCTCAGCAGGTCTGCAGTaGAGTTGGCAGGGCCGGAGC +
Preference number: 5 (lower is better)
Translates to: PSLISPCKAVELGRQSFSSAGLQ*SWQGRS
Trigger: GCTCCGGCCCTGCCAACTCAACTGCAGACCTGCTGA...GGAAAAGCTCTGTCTCCCTAACTCAACTGCTTTGCAAGGGGAAATCAAGCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp CACATGCGCACACACGTCCTGTGTTACCACTGGCCAAGGAAACGCGAGTCTCAGTTGACGAAGAGCACATaGCAGGCTGCCCCTTGTTTC +
Preference number: 5 (lower is better)
Translates to: HMRTHVLCYHWPRKRESQLTKST*QAAPCF
Trigger: GAAACAAGGGGCAGCCTGCAATGTGCTCTTCGTCAA...CTGAGACTCGCGTTTCCTTGGCCAGTGGTAACACAGGACGTGTGTGCGCATGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp GTAGAAGAGAAGGGTCTGGCGGCACCCAGGGTCACTAGAGTGCAGGTGCAGGCAAAGAGCTTTCTCTGGTaGTCAGTCAGAGTGATTCCC +
Preference number: 5 (lower is better)
Translates to: VEEKGLAAPRVTRVQVQAKSFLW*SVRVIP
Trigger: GGGAATCACTCTGACTGACAACCAGAGAAAGCTCTT...TGCCTGCACCTGCACTCTAGTGACCCTGGGTGCCGCCAGACCCTTCTCTTCTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp CCCAGCTTGATTTCCCCTTGCAAAGCAGTTGAGTTAGGGAGACAGAGCTTTTCCGCAGAGGCCGGCTGGTaGGGGTCAAGCTCAGCAAAG +
Preference number: 5 (lower is better)
Translates to: PSLISPCKAVELGRQSFSAEAGW*GSSSAK
Trigger: CTTTGCTGAGCTTGACCCCAACCAGCCGGCCTCTGC...GGAAAAGCTCTGTCTCCCTAACTCAACTGCTTTGCAAGGGGAAATCAAGCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp GTACAGGAGTGGGGACGCGTCAGTGTACAATACATTCATGTCCAGGATAAGGAGGCAGAGGCCGGCTGGTaGGGGTCAAGCTCAGCAAAG +
Preference number: 5 (lower is better)
Translates to: VQEWGRVSVQYIHVQDKEAEAGW*GSSSAK
Trigger: CTTTGCTGAGCTTGACCCCAACCAGCCGGCCTCTGC...CTCCTTATCCTGGACATGAATGTATTGTACACTGACGCGTCCCCACTCCTGTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp TCTGCCCTCTGCTGCATGGGCAGCGTGGCTCAGCTAGGGAAACCAAGGCAGAAAGCATTCAGCATGACCTaGGAGACGAAGTTGACGATG +
Preference number: 5 (lower is better)
Translates to: SALCCMGSVAQLGKPRQKAFSMT*ETKLTM
Trigger: CATCGTCAACTTCGTCTCCAAGGTCATGCTGAATGC...TTTCTGCCTTGGTTTCCCTAGCTGAGCCACGCTGCCCATGCAGCAGAGGGCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp GTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCATGGGTCCCCTCCCCACAAGCAGGGTTCATCTCTTTaGGCCGGCATTCAGCATGAC +
Preference number: 5 (lower is better)
Translates to: VLLLGSRVVRIHGSPPHKQGSSL*AGIQHD
Trigger: GTCATGCTGAATGCCGGCCAAAAGAGATGAACCCTG...CTTGTGGGGAGGGGACCCATGAATCCTGACCACTCTTGAACCCAGAAGGAGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp CGATGCCATTGCAGACCCTCCCACTCCTGCTGGGGTCTTTGTAGAAGAGAAGGGGTGGCTCTGTTTGGTTaGACAACCTACCCCACAGGT +
Preference number: 5 (lower is better)
Translates to: RCHCRPSHSCWGLCRREGVALFG*TTYPTG
Trigger: ACCTGTGGGGTAGGTTGTCAAACCAAACAGAGCCAC...CCCTTCTCTTCTACAAAGACCCCAGCAGGAGTGGGAGGGTCTGCAATGGCATCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp ATGCGCACACACGTCCTGTGTTACCACTGGCCAAGGAAACGCGAGTCTCAGGATTCACCCATAGCTTGGTaGTTTGTCCCTCCCCTGCTG +
Preference number: 5 (lower is better)
Translates to: MRTHVLCYHWPRKRESQDSPIAW*FVPPLL
Trigger: CAGCAGGGGAGGGACAAACAACCAAGCTATGGGTGA...ATCCTGAGACTCGCGTTTCCTTGGCCAGTGGTAACACAGGACGTGTGTGCGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp CGCAGGGATGCTGGGAGGGAGTTACCAGCTTTCTGGCATGAATGGGTCCTCCCGGAAGATAATTGGGGTTaGCTAGGGAATGAGGAGAGG +
Preference number: 5 (lower is better)
Translates to: RRDAGRELPAFWHEWVLPEDNWG*LGNEER
Trigger: CCTCTCCTCATTCCCTAGCAAACCCCAATTATCTTC...CGGGAGGACCCATTCATGCCAGAAAGCTGGTAACTCCCTCCCAGCATCCCTGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp CATGGGTGCACAGCCCGCCGTGACACAGAAGGGCTCTGGTGCAGGGCCCAGAGGGAAATATCTCCTATCTaGGAAGATAATTGGGGTTTG +
Preference number: 5 (lower is better)
Translates to: HGCTARRDTEGLWCRAQREISPI*EDNWGL
Trigger: CAAACCCCAATTATCTTCCAAGATAGGAGATATTTC...CCTCTGGGCCCTGCACCAGAGCCCTTCTGTGTCACGGCGGGCTGTGCACCCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp CTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCATCCCCAGCCAGGCTGCTaGAAGGGTCTGATACACCGC +
Preference number: 5 (lower is better)
Translates to: LRNWPKVLLLGSRVVRIHPQPGC*KGLIHR
Trigger: GCGGTGTATCAGACCCTTCAAGCAGCCTGGCTGGGG...ATGAATCCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp GCAGACCCTCCCACTCCTGCTGGGGTCTTTGTAGAAGAGAAGGGTCTGGCGGCATCCCCATCATTCGCCTaGAAAAGTCACACTCTCAGA +
Preference number: 5 (lower is better)
Translates to: ADPPTPAGVFVEEKGLAASPSFA*KSHTLR
Trigger: TCTGAGAGTGTGACTTTTCAAGGCGAATGATGGGGA...TGCCGCCAGACCCTTCTCTTCTACAAAGACCCCAGCAGGAGTGGGAGGGTCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp GTACAGGAGTGGGGACGCGTCAGTGTACAATACATTCATGTCCAGGATAAGGAGGGATGCTGGGTGATCTaGTTTCCCCCGCAGAGGGCC +
Preference number: 5 (lower is better)
Translates to: VQEWGRVSVQYIHVQDKEGCWVI*FPPQRA
Trigger: GGCCCTCTGCGGGGGAAACAAGATCACCCAGCATCC...CTCCTTATCCTGGACATGAATGTATTGTACACTGACGCGTCCCCACTCCTGTAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp CAGCACAACGACCAATTAGGCTGGCAGCCACTGAAACCTCAGAACAAATTCGCTGCCTGGTGGGGTGTCTaGGCCAATCTGAGGGTGCTG +
Preference number: 5 (lower is better)
Translates to: QHNDQLGWQPLKPQNKFAAWWGV*ANLRVL
Trigger: CAGCACCCTCAGATTGGCCAAGACACCCCACCAGGC...AGCGAATTTGTTCTGAGGTTTCAGTGGCTGCCAGCCTAATTGGTCGTTGTGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453356.1
CDS TCA 90 bp GGGGTGACCCTGGTGGAGCCCTCCAAAACACAATCCTTCCTTTGCTaGAAGGGCACCATGAAAGGAAATTCGACAGCCTCCCAGACAGAG +
Preference number: 5 (lower is better)
Translates to: GVTLVEPSKTQSFLC*KGTMKGNSTASQTE
Trigger: CTCTGTCTGGGAGGCTGTCGAATTTCCTTTCATGGTGCCCTTTCAGCAAAGGAAGGATTGTGTTTTGGAGGGCTCCACCAGGGTCACCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310858.10
CDS TCA 90 bp CTTCCTAGACCAGCGCCTTCTTATCCCCAGACTCATGCTTCCCCATaGAGGTTGCACTGCTCTCTAGCACAGGCCTCAGAGTCAAGTGCT +
Preference number: 5 (lower is better)
Translates to: LPRPAPSYPQTHASP*RLHCSLAQASESSA
Trigger: AGCACTTGACTCTGAGGCCTGTGCTAGAGAGCAGTGCAACCTTCATGGGGAAGCATGAGTCTGGGGATAAGAAGGCGCTGGTCTAGGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000492338.2
CDS TCA 90 bp CTGTCTAAACTCTCCCAACAGAAGGTGACCCTTATCATGAGTGTCTaGCCTCCCACAGCAGGGGGCAGTGATGCAGTCTCCCGTAGACTC +
Preference number: 5 (lower is better)
Translates to: LSKLSQQKVTLIMSV*PPTAGGSDAVSRRL
Trigger: GAGTCTACGGGAGACTGCATCACTGCCCCCTGCTGTGGGAGGTCAGACACTCATGATAAGGGTCACCTTCTGTTGGGAGAGTTTAGACAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000492338.2
CDS GCA 90 bp GTACCCCTTTCCTCTCCTTCACAAGCTGCTCCATGCCAGTTCCTATaGTGGTTCCCTCCTCCTGTCTGTAGCCTTGGAATGTGGGAGGTT +
Preference number: 5 (lower is better)
Translates to: VPLSSPSQAAPCQFL*WFPPPVCSLGMWEV
Trigger: AACCTCCCACATTCCAAGGCTACAGACAGGAGGAGGGAACCAGCATAGGAACTGGCATGGAGCAGCTTGTGAAGGAGAGGAAAGGGGTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446688.5
CDS CCA 90 bp CTTGTGGTAGCACTTCAGCAAGATGTCTCCCTTCAAGAGCAGTCCTaGCTCGATGGTGATGCAGACGCTAGTCTGGCTGTCTCCTGGGAT +
Preference number: 5 (lower is better)
Translates to: LVVALQQDVSLQEQS*LDGDADASLAVSWD
Trigger: ATCCCAGGAGACAGCCAGACTAGCGTCTGCATCACCATCGAGCCAGGACTGCTCTTGAAGGGAGACATCTTGCTGAAGTGCTACCACAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000171887.8
ENST00000310858.10
ENST00000413554.5
ENST00000419504.5
ENST00000430930.5
ENST00000446903.5
ENST00000479185.1
ENST00000611415.4
ENST00000615025.5
ENST00000646520.1
ENST00000651849.1
ENST00000682258.1
CDS CCA 90 bp GGCTGTGAGCCCCAGAGACCCACCTTCTTTGGGATGGCTGGCCAATaGGCACAATCTTATCCTCATAGAACCGCTTCATTGCAAACCGGT +
Preference number: 5 (lower is better)
Translates to: GCEPQRPTFFGMAGQ*AQSYPHRTASLQTG
Trigger: ACCGGTTTGCAATGAAGCGGTTCTATGAGGATAAGATTGTGCCCATTGGCCAGCCATCCCAAAGAAGGTGGGTCTCTGGGGCTCACAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492338.2
CDS-3UTR CAA 90 bp TCTGCAATTCACTTCCCTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCACCAGCTCATGGTaGGATGGAGGAACGCAGGGG +
Preference number: 5 (lower is better)
Translates to: SAIHFPLPTLHFLLSSEIGTSSW*DGGTQG
Trigger: CCCCTGCGTTCCTCCATCCAACCATGAGCTGGTGCC...AATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGGGAAGTGAATTGCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp GTACAGGAGTGGGGACGCGTCAGTGTACAATACATTCATGTCCAGGATAAGGAGGCCACCTCACGGAGGTaGCTCCGGAAGTTCTCCTCA +
Preference number: 5 (lower is better)
Translates to: VQEWGRVSVQYIHVQDKEATSRR*LRKFSS
Trigger: TGAGGAGAACTTCCGGAGCAACCTCCGTGAGGTGGC...CTCCTTATCCTGGACATGAATGTATTGTACACTGACGCGTCCCCACTCCTGTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp CGATGCCATTGCAGACCCTCCCACTCCTGCTGGGGTCTTTGTAGAAGAGAAGGGCCAAATTCCAGTACCTaGGCATGGAGCTTCGTGATG +
Preference number: 5 (lower is better)
Translates to: RCHCRPSHSCWGLCRREGPNSST*AWSFVM
Trigger: CATCACGAAGCTCCATGCCAAGGTACTGGAATTTGG...CCCTTCTCTTCTACAAAGACCCCAGCAGGAGTGGGAGGGTCTGCAATGGCATCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp GGGCGATGCCATTGCAGACCCTCCCACTCCTGCTGGGGTCTTTGTAGAAGAGAACCAAATTCCAGTACCTaGGCATGGAGCTTCGTGATG +
Preference number: 5 (lower is better)
Translates to: GRCHCRPSHSCWGLCRREPNSST*AWSFVM
Trigger: CATCACGAAGCTCCATGCCAAGGTACTGGAATTTGG...TTCTCTTCTACAAAGACCCCAGCAGGAGTGGGAGGGTCTGCAATGGCATCGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp GTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCATGGGTCCCCTCCCCACAAGCTGCCTCGGTTTCCCTaGTTGTGTAGAACAACGACA +
Preference number: 5 (lower is better)
Translates to: VLLLGSRVVRIHGSPPHKLPRFP*LCRTTT
Trigger: TGTCGTTGTTCTACACAACAAGGGAAACCGAGGCAG...CTTGTGGGGAGGGGACCCATGAATCCTGACCACTCTTGAACCCAGAAGGAGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp CTTCCCTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCATGCACGTACCTTCTTaGGGATGGCTGGCCAATGGG +
Preference number: 5 (lower is better)
Translates to: LPSPHVALSSLLRNWPKVMHVPS*GWLANG
Trigger: CCCATTGGCCAGCCATCCCAAAGAAGGTACGTGCAT...GACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGGGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp GGGCGATGCCATTGCAGACCCTCCCACTCCTGCTGGGGTCTTTGTAGAAGAGAACCTTTAGACTCAAAGTaGGGGATGCCGTGCATGATC +
Preference number: 5 (lower is better)
Translates to: GRCHCRPSHSCWGLCRREPLDSK*GMPCMI
Trigger: GATCATGCACGGCATCCCCAACTTTGAGTCTAAAGG...TTCTCTTCTACAAAGACCCCAGCAGGAGTGGGAGGGTCTGCAATGGCATCGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp CGATGCCATTGCAGACCCTCCCACTCCTGCTGGGGTCTTTGTAGAAGAGAAGGGCAGGTGCTCCATGCCTaGAATTTTCTCTGGCCCATA +
Preference number: 5 (lower is better)
Translates to: RCHCRPSHSCWGLCRREGQVLHA*NFLWPI
Trigger: TATGGGCCAGAGAAAATTCAAGGCATGGAGCACCTG...CCCTTCTCTTCTACAAAGACCCCAGCAGGAGTGGGAGGGTCTGCAATGGCATCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp GGGCGATGCCATTGCAGACCCTCCCACTCCTGCTGGGGTCTTTGTAGAAGAGAACAGGTGCTCCATGCCTaGAATTTTCTCTGGCCCATA +
Preference number: 5 (lower is better)
Translates to: GRCHCRPSHSCWGLCRREQVLHA*NFLWPI
Trigger: TATGGGCCAGAGAAAATTCAAGGCATGGAGCACCTG...TTCTCTTCTACAAAGACCCCAGCAGGAGTGGGAGGGTCTGCAATGGCATCGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp CCCAGCTTGATTTCCCCTTGCAAAGCAGTTGAGTTAGGGAGACAGAGCTTTTCCGTGTGTTCCACGTGGTaGGGGGTGGCCGACAGTGTA +
Preference number: 5 (lower is better)
Translates to: PSLISPCKAVELGRQSFSVCSTW*GVADSV
Trigger: TACACTGTCGGCCACCCCCAACCACGTGGAACACAC...GGAAAAGCTCTGTCTCCCTAACTCAACTGCTTTGCAAGGGGAAATCAAGCTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp CTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCATACAGGCTCGTCGGTCTaGTCGGTCTTGGTGGAGGCT +
Preference number: 5 (lower is better)
Translates to: LRNWPKVLLLGSRVVRIHTGSSV*SVLVEA
Trigger: AGCCTCCACCAAGACCGACAAGACCGACGAGCCTGT...ATGAATCCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp AGATCTAGATCAATGTGTGAGGATGTGGGTGCAGACACACACCCACACGACAATGACTTGTCCAGACCGTaGGTCAGTGGGGACAGGGCC +
Preference number: 5 (lower is better)
Translates to: RSRSMCEDVGADTHPHDNDLSRP*VSGDRA
Trigger: GGCCCTGTCCCCACTGACCAACGGTCTGGACAAGTC...ATTGTCGTGTGGGTGTGTGTCTGCACCCACATCCTCACACATTGATCTAGATCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp ACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGACTTGTCCAGACCGTaGGTCAGTGGGGACAGGGCC +
Preference number: 5 (lower is better)
Translates to: TFFSPPKLAQSPPSGFKSDLSRP*VSGDRA
Trigger: GGCCCTGTCCCCACTGACCAACGGTCTGGACAAGTC...ACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp TCTGCAATTCACTTCCCTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCCGCCCTCCAGGATaGAGAGCGATGGTAAGAGCC +
Preference number: 5 (lower is better)
Translates to: SAIHFPLPTLHFLLSSEIGRPPG*RAMVRA
Trigger: GGCTCTTACCATCGCTCTCAATCCTGGAGGGCGGCC...AATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGGGAAGTGAATTGCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp CTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCATTGCAAATGGGGCTCTTaGGGCCGCCCTCCAGGATTG +
Preference number: 5 (lower is better)
Translates to: LRNWPKVLLLGSRVVRIHCKWGS*GRPPGL
Trigger: CAATCCTGGAGGGCGGCCCAAAGAGCCCCATTTGCA...ATGAATCCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp GTACAGGAGTGGGGACGCGTCAGTGTACAATACATTCATGTCCAGGATAAGGAGGGACTAGGGGGAGTGTaGGTGCCCACTGTTCTGTGG +
Preference number: 5 (lower is better)
Translates to: VQEWGRVSVQYIHVQDKEGLGGV*VPTVLW
Trigger: CCACAGAACAGTGGGCACCAACACTCCCCCTAGTCC...CTCCTTATCCTGGACATGAATGTATTGTACACTGACGCGTCCCCACTCCTGTAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp CTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCATGGACTAGGGGGAGTGTaGGTGCCCACTGTTCTGTGG +
Preference number: 5 (lower is better)
Translates to: LRNWPKVLLLGSRVVRIHGLGGV*VPTVLW
Trigger: CCACAGAACAGTGGGCACCAACACTCCCCCTAGTCC...ATGAATCCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp AATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCATGGGTCCGTGGTGGCCACTTTGTaGTGGAGGCCAGAAACCTGG +
Preference number: 5 (lower is better)
Translates to: NWPKVLLLGSRVVRIHGSVVATL*WRPETW
Trigger: CCAGGTTTCTGGCCTCCACAACAAAGTGGCCACCAC...GGACCCATGAATCCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp TTGATTTCCCCTTGCAAAGCAGTTGAGTTAGGGAGACAGAGCTTTTCCATTCCCTGGTGTTGGGCTCCCTaGCCGGAAGGCTGCGGAGTC +
Preference number: 5 (lower is better)
Translates to: LISPCKAVELGRQSFSIPWCWAP*PEGCGV
Trigger: GACTCCGCAGCCTTCCGGCAAGGGAGCCCAACACCA...GGGAATGGAAAAGCTCTGTCTCCCTAACTCAACTGCTTTGCAAGGGGAAATCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp TTGGGTTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTCTCCTCCATCTGGCAAGGCTGGTGTaGGGCTCCCTTGCCGGAAGG +
Preference number: 5 (lower is better)
Translates to: LGFCSFHLPRGIQVLLLHLARLV*GSLAGR
Trigger: CCTTCCGGCAAGGGAGCCCAACACCAGCCTTGCCAG...ATGGAGGAGAAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAACCCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp GCAATTCACTTCCCTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCACAGCGATCCGAAGTTaGGCTCATTGGGGCAGCCCT +
Preference number: 5 (lower is better)
Translates to: AIHFPLPTLHFLLSSEIGTAIRS*AHWGSP
Trigger: AGGGCTGCCCCAATGAGCCAAACTTCGGATCGCTGT...GCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGGGAAGTGAATTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp TCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATAGGTCTGCAGTTGAGTaGGCAGGGCCGGAGCTATCT +
Preference number: 5 (lower is better)
Translates to: SPPKLAQSPPSGFKSGQDRSAVE*AGPELS
Trigger: AGATAGCTCCGGCCCTGCCAACTCAACTGCAGACCT...ATCCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp AGATCTAGATCAATGTGTGAGGATGTGGGTGCAGACACACACCCACACGACAATTCAGCAGGTCTGCAGTaGAGTTGGCAGGGCCGGAGC +
Preference number: 5 (lower is better)
Translates to: RSRSMCEDVGADTHPHDNSAGLQ*SWQGRS
Trigger: GCTCCGGCCCTGCCAACTCAACTGCAGACCTGCTGA...ATTGTCGTGTGGGTGTGTGTCTGCACCCACATCCTCACACATTGATCTAGATCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp GATCTAGATCAATGTGTGAGGATGTGGGTGCAGACACACACCCACACGACAATATCAGCAGGTCTGCAGTaGAGTTGGCAGGGCCGGAGC +
Preference number: 5 (lower is better)
Translates to: DLDQCVRMWVQTHTHTTISAGLQ*SWQGRS
Trigger: GCTCCGGCCCTGCCAACTCAACTGCAGACCTGCTGA...TATTGTCGTGTGGGTGTGTGTCTGCACCCACATCCTCACACATTGATCTAGATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp TTGGGTTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTCTCCTCCATAAGAGGTGGCAGGCGTaGTCCGTGGTGCTGCCCTGC +
Preference number: 5 (lower is better)
Translates to: LGFCSFHLPRGIQVLLLHKRWQA*SVVLPC
Trigger: GCAGGGCAGCACCACGGACAACGCCTGCCACCTCTT...ATGGAGGAGAAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAACCCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp ACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGCAGAGGCCGGCTGGTaGGGGTCAAGCTCAGCAAAG +
Preference number: 5 (lower is better)
Translates to: TFFSPPKLAQSPPSGFKSAEAGW*GSSSAK
Trigger: CTTTGCTGAGCTTGACCCCAACCAGCCGGCCTCTGC...ACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp CCATTCTGGCTTAGAGTCCTTAAATGGTGGTCAGGTGTTTTCCCAACTGTCCAGGCAGAGGCCGGCTGGTaGGGGTCAAGCTCAGCAAAG +
Preference number: 5 (lower is better)
Translates to: PFWLRVLKWWSGVFPTVQAEAGW*GSSSAK
Trigger: CTTTGCTGAGCTTGACCCCAACCAGCCGGCCTCTGC...CTGGACAGTTGGGAAAACACCTGACCACCATTTAAGGACTCTAAGCCAGAATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp CACATGCGCACACACGTCCTGTGTTACCACTGGCCAAGGAAACGCGAGTCTCAGGCATTCAGCATGACCTaGGAGACGAAGTTGACGATG +
Preference number: 5 (lower is better)
Translates to: HMRTHVLCYHWPRKRESQAFSMT*ETKLTM
Trigger: CATCGTCAACTTCGTCTCCAAGGTCATGCTGAATGC...CTGAGACTCGCGTTTCCTTGGCCAGTGGTAACACAGGACGTGTGTGCGCATGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp CCTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCCTCCCAGGGTTCATCTCTTTaGGCCGGCATTCAGCATGAC +
Preference number: 5 (lower is better)
Translates to: PLPTLHFLLSSEIGPKSSQGSSL*AGIQHD
Trigger: GTCATGCTGAATGCCGGCCAAAAGAGATGAACCCTG...GGAGGACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp GTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCATGGGTCCCCTCCCCACAAGTTCTCTCCTCCGAAATaGGCCCAAAGTCCTCCTTCT +
Preference number: 5 (lower is better)
Translates to: VLLLGSRVVRIHGSPPHKFSPPK*AQSPPS
Trigger: AGAAGGAGGACTTTGGGCCAATTTCGGAGGAGAGAA...CTTGTGGGGAGGGGACCCATGAATCCTGACCACTCTTGAACCCAGAAGGAGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp CCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCCCTCTCCCCACGTaGCACTTTCTTCTCTCCTCC +
Preference number: 5 (lower is better)
Translates to: PRCTFFSPPKLAQSPPSGFPLPT*HFLLSS
Trigger: GGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGGGAA...CCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp CACATGCGCACACACGTCCTGTGTTACCACTGGCCAAGGAAACGCGAGTCTCAGGGAGGCTTTGGGTTTTaGCAGTTTCCATCTACCCAG +
Preference number: 5 (lower is better)
Translates to: HMRTHVLCYHWPRKRESQGGFGF*QFPSTQ
Trigger: CTGGGTAGATGGAAACTGCAAAAACCCAAAGCCTCC...CTGAGACTCGCGTTTCCTTGGCCAGTGGTAACACAGGACGTGTGTGCGCATGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp TCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTGGACCTTAGGCCCTTaGGCCCAAGTGCAAGCCTTC +
Preference number: 5 (lower is better)
Translates to: SPPKLAQSPPSGFKSGQDWTLGP*AQVQAF
Trigger: GAAGGCTTGCACTTGGGCCAAAGGGCCTAAGGTCCA...ATCCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp GTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCATGGGTCCCCTCCCCACAAGAGAAGGAAGAGCACTTaGGAGGGACTTTGGTCACCA +
Preference number: 5 (lower is better)
Translates to: VLLLGSRVVRIHGSPPHKRRKST*EGLWSP
Trigger: TGGTGACCAAAGTCCCTCCAAAGTGCTCTTCCTTCT...CTTGTGGGGAGGGGACCCATGAATCCTGACCACTCTTGAACCCAGAAGGAGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp CTTCCCTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCTCCCTCTTGCTCCCTTaGGGAAAAAGCCACGTGGAG +
Preference number: 5 (lower is better)
Translates to: LPSPHVALSSLLRNWPKVSLLLP*GKSHVE
Trigger: CTCCACGTGGCTTTTTCCCAAAGGGAGCAAGAGGGA...GACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGGGAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp TGGTCAGGTGTTTTCCCAACTGTCCAGTGGACCTTAGGCCCTTTGGCCCAAGTGCCCAATCCTTCCCTCTaGCTCCCTTTGGGAAAAAGC +
Preference number: 5 (lower is better)
Translates to: WSGVFPTVQWTLGPLAQVPNPSL*LPLGKS
Trigger: GCTTTTTCCCAAAGGGAGCAAGAGGGAAGGATTGGG...CACTTGGGCCAAAGGGCCTAAGGTCCACTGGACAGTTGGGAAAACACCTGACCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp TCTGCCCTCTGCTGCATGGGCAGCGTGGCTCAGCTAGGGAAACCAAGGCAGAAATGGGCGACATTGAATTaGAAGTTCCATTGCCCAGCA +
Preference number: 5 (lower is better)
Translates to: SALCCMGSVAQLGKPRQKWATLN*KFHCPA
Trigger: TGCTGGGCAATGGAACTTCAAATTCAATGTCGCCCA...TTTCTGCCTTGGTTTCCCTAGCTGAGCCACGCTGCCCATGCAGCAGAGGGCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp CTTCCCTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCCTGAGACTCCACCAATaGGTTGGCCTACAGGCCTCA +
Preference number: 5 (lower is better)
Translates to: LPSPHVALSSLLRNWPKVLRLHQ*VGLQAS
Trigger: TGAGGCCTGTAGGCCAACCAATTGGTGGAGTCTCAG...GACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGGGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS TCA 90 bp CTGCAAGAGGGCGAGACACAGAAAGAAAGTTTTAGCCGCGAGGTATaGAATGGAAACTCCGCGAAATCTCCTCCCACCCCAGCCCGCAAT +
Preference number: 5 (lower is better)
Translates to: LQEGETQKESFSREV*NGNSAKSPPTPARN
Trigger: ATTGCGGGCTGGGGTGGGAGGAGATTTCGCGGAGTTTCCATTTCATACCTCGCGGCTAAAACTTTCTTTCTGTGTCTCGCCCTCTTGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413280.5
CDS GCA 90 bp TGGCTGGCCAATGGGCACAATCTTATCCTCATAGAACCGCTTCATTaGAAACCGGTCCAGAGCCTGGTCCGCACTGGCAGAAATGTTGCT +
Preference number: 5 (lower is better)
Translates to: WLANGHNLILIEPLH*KPVQSLVRTGRNVA
Trigger: AGCAACATTTCTGCCAGTGCGGACCAGGCTCTGGACCGGTTTGCAATGAAGCGGTTCTATGAGGATAAGATTGTGCCCATTGGCCAGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000171887.8
ENST00000310858.10
ENST00000413554.5
ENST00000419504.5
ENST00000430930.5
ENST00000446903.5
ENST00000492338.2
ENST00000611415.4
ENST00000615025.5
ENST00000646520.1
ENST00000651849.1
ENST00000682258.1
CDS-3UTR CAA 90 bp CACAGGGCAGAGTCCAGGAGCCAGAACACTTCCTTGGCTTGGAAAAGGAAAAAGCCTCCATGTTTGGACTaGAGCATCTGCGCCACCTCA +
Preference number: 5 (lower is better)
Translates to: HRAESRSQNTSLAWKRKKPPCLD*SICATS
Trigger: TGAGGTGGCGCAGATGCTCAAGTCCAAACATGGAGG...CTTTTTCCTTTTCCAAGCCAAGGAAGTGTTCTGGCTCCTGGACTCTGCCCTGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310858.10
CDS-3UTR CAA 90 bp GGGGAAGACACCCCGAGCTCAACAGCTGCCTGTTCTGACAGATCTCTTCCTATGCCAAATTCCAGTACCTaGGCATGGAGCTTCGTGATG +
Preference number: 5 (lower is better)
Translates to: GEDTPSSTAACSDRSLPMPNSST*AWSFVM
Trigger: CATCACGAAGCTCCATGCCAAGGTACTGGAATTTGG...CATAGGAAGAGATCTGTCAGAACAGGCAGCTGTTGAGCTCGGGGTGTCTTCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp GTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCATGGGTCCCCTCCCCACAAGCCTCGGTTTCCCTTGTaGTGTAGAACAACGACATTG +
Preference number: 5 (lower is better)
Translates to: VLLLGSRVVRIHGSPPHKPRFPL*CRTTTL
Trigger: CAATGTCGTTGTTCTACACAACAAGGGAAACCGAGG...CTTGTGGGGAGGGGACCCATGAATCCTGACCACTCTTGAACCCAGAAGGAGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp GGACAGGAGCCCCAACATGAAGTTCTCAGTGCAAAGCTTTGGATTCTGGCTTGGATGCACGTACCTTCTTaGGGATGGCTGGCCAATGGG +
Preference number: 5 (lower is better)
Translates to: GQEPQHEVLSAKLWILAWMHVPS*GWLANG
Trigger: CCCATTGGCCAGCCATCCCAAAGAAGGTACGTGCAT...CCAAGCCAGAATCCAAAGCTTTGCACTGAGAACTTCATGTTGGGGCTCCTGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310858.10
CDS-3UTR CAA 90 bp GCAATTCACTTCCCTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCATGCACGTACCTTCTTaGGGATGGCTGGCCAATGGG +
Preference number: 5 (lower is better)
Translates to: AIHFPLPTLHFLLSSEIGMHVPS*GWLANG
Trigger: CCCATTGGCCAGCCATCCCAAAGAAGGTACGTGCAT...GCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGGGAAGTGAATTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp ACCCTCCTTTCCAACTCCCTGAAACAGAACGTCCACACTGACACAGCTCCTTGGGGCTTGTTGTTCATTTaGATGGAGCCGGAGAGCAGG +
Preference number: 5 (lower is better)
Translates to: TLLSNSLKQNVHTDTAPWGLLFI*MEPESR
Trigger: CCTGCTCTCCGGCTCCATCAAAATGAACAACAAGCC...CCAAGGAGCTGTGTCAGTGTGGACGTTCTGTTTCAGGGAGTTGGAAAGGAGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp ATGTCCCACGGTGGCTCTGTTTGGTTTGACAACCTACCCCACAGGTGGCCAGAACCTTTAGACTCAAAGTaGGGGATGCCGTGCATGATC +
Preference number: 5 (lower is better)
Translates to: MSHGGSVWFDNLPHRWPEPLDSK*GMPCMI
Trigger: GATCATGCACGGCATCCCCAACTTTGAGTCTAAAGG...TTCTGGCCACCTGTGGGGTAGGTTGTCAAACCAAACAGAGCCACCGTGGGACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp CGCAGGGATGCTGGGAGGGAGTTACCAGCTTTCTGGCATGAATGGGTCCTCCCGGGAAATCGATCATCTTaGAAAGCATCATCAAGGTCC +
Preference number: 5 (lower is better)
Translates to: RRDAGRELPAFWHEWVLPGNRSS*KASSRS
Trigger: GGACCTTGATGATGCTTTCAAAGATGATCGATTTCC...CGGGAGGACCCATTCATGCCAGAAAGCTGGTAACTCCCTCCCAGCATCCCTGCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp TTGATTTCCCCTTGCAAAGCAGTTGAGTTAGGGAGACAGAGCTTTTCCATTCCCGTGGAGGCTGTGGAGTaGCCCGAGTCGCTGCTCACA +
Preference number: 5 (lower is better)
Translates to: LISPCKAVELGRQSFSIPVEAVE*PESLLT
Trigger: TGTGAGCAGCGACTCGGGCAACTCCACAGCCTCCAC...GGGAATGGAAAAGCTCTGTCTCCCTAACTCAACTGCTTTGCAAGGGGAAATCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp TTGGAGGCTTTGGGTTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTGACTTGTCCAGACCGTaGGTCAGTGGGGACAGGGCC +
Preference number: 5 (lower is better)
Translates to: LEALGFCSFHLPRGIQVLDLSRP*VSGDRA
Trigger: GGCCCTGTCCCCACTGACCAACGGTCTGGACAAGTC...AAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAACCCAAAGCCTCCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp CCATTCTGGCTTAGAGTCCTTAAATGGTGGTCAGGTGTTTTCCCAACTGTCCAGGGACTAGGGGGAGTGTaGGTGCCCACTGTTCTGTGG +
Preference number: 5 (lower is better)
Translates to: PFWLRVLKWWSGVFPTVQGLGGV*VPTVLW
Trigger: CCACAGAACAGTGGGCACCAACACTCCCCCTAGTCC...CTGGACAGTTGGGAAAACACCTGACCACCATTTAAGGACTCTAAGCCAGAATGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp GTTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTCTCCTCCATCTTTGCAGCCATGCTGGGATaGATGGCCCGCCAGCCGAAG +
Preference number: 5 (lower is better)
Translates to: VFAVSIYPGESKFFSSIFAAMLG*MARQPK
Trigger: CTTCGGCTGGCGGGCCATCAATCCCAGCATGGCTGC...AAAGATGGAGGAGAAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp TCTCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGTTCCAGGGCTGGCTATaGCATTGCTATGAAGACCGG +
Preference number: 5 (lower is better)
Translates to: SLLRNWPKVLLLGSRVVRFQGWL*HCYEDR
Trigger: CCGGTCTTCATAGCAATGCAATAGCCAGCCCTGGAA...CCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp TCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCTGGCATGGAGTACTaGGAGAAGTCGGGCAGAGTG +
Preference number: 5 (lower is better)
Translates to: SPPKLAQSPPSGFKSGQDSGMEY*EKSGRV
Trigger: CACTCTGCCCGACTTCTCCAAGTACTCCATGCCAGA...ATCCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp TCTTCTCCCAGACCCTTTCCCATCCCAGCCCATGTTCAAGGCCAGACAGCGCTCCTGGAGATCTCAGGCTaGTACCAATACTTAGAAGTG +
Preference number: 5 (lower is better)
Translates to: SSPRPFPIPAHVQGQTALLEISG*YQYLEV
Trigger: CACTTCTAAGTATTGGTACAAGCCTGAGATCTCCAG...GAGCGCTGTCTGGCCTTGAACATGGGCTGGGATGGGAAAGGGTCTGGGAGAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp AATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCATGGGTCCTTTGGAATGACCAGCTaGCAAGGCAGGGCCAATGGG +
Preference number: 5 (lower is better)
Translates to: NWPKVLLLGSRVVRIHGSFGMTS*QGRANG
Trigger: CCCATTGGCCCTGCCTTGCAAGCTGGTCATTCCAAA...GGACCCATGAATCCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp CCCAGCTTGATTTCCCCTTGCAAAGCAGTTGAGTTAGGGAGACAGAGCTTTTCCAGGTCTGCAGTTGAGTaGGCAGGGCCGGAGCTATCT +
Preference number: 5 (lower is better)
Translates to: PSLISPCKAVELGRQSFSRSAVE*AGPELS
Trigger: AGATAGCTCCGGCCCTGCCAACTCAACTGCAGACCT...GGAAAAGCTCTGTCTCCCTAACTCAACTGCTTTGCAAGGGGAAATCAAGCTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp TTGATTTCCCCTTGCAAAGCAGTTGAGTTAGGGAGACAGAGCTTTTCCATTCCCTCAGCAGGTCTGCAGTaGAGTTGGCAGGGCCGGAGC +
Preference number: 5 (lower is better)
Translates to: LISPCKAVELGRQSFSIPSAGLQ*SWQGRS
Trigger: GCTCCGGCCCTGCCAACTCAACTGCAGACCTGCTGA...GGGAATGGAAAAGCTCTGTCTCCCTAACTCAACTGCTTTGCAAGGGGAAATCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp TTGGGTTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTCTCCTCCATGCAGAGGCCGGCTGGTaGGGGTCAAGCTCAGCAAAG +
Preference number: 5 (lower is better)
Translates to: LGFCSFHLPRGIQVLLLHAEAGW*GSSSAK
Trigger: CTTTGCTGAGCTTGACCCCAACCAGCCGGCCTCTGC...ATGGAGGAGAAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAACCCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp ACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTACCTTGGAGACGAAGTaGACGATGGCAGAGGCCGGC +
Preference number: 5 (lower is better)
Translates to: TFFSPPKLAQSPPSGFKSTLETK*TMAEAG
Trigger: GCCGGCCTCTGCCATCGTCAACTTCGTCTCCAAGGT...ACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp CCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGCAGGGTTCATCTCTTTaGGCCGGCATTCAGCATGAC +
Preference number: 5 (lower is better)
Translates to: PRCTFFSPPKLAQSPPSGQGSSL*AGIQHD
Trigger: GTCATGCTGAATGCCGGCCAAAAGAGATGAACCCTG...CCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp GGGGAAGACACCCCGAGCTCAACAGCTGCCTGTTCTGACAGATCTCTTCCTATGTTCTCTCCTCCGAAATaGGCCCAAAGTCCTCCTTCT +
Preference number: 5 (lower is better)
Translates to: GEDTPSSTAACSDRSLPMFSPPK*AQSPPS
Trigger: AGAAGGAGGACTTTGGGCCAATTTCGGAGGAGAGAA...CATAGGAAGAGATCTGTCAGAACAGGCAGCTGTTGAGCTCGGGGTGTCTTCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp TCTCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGGTGGCTCTGTTTGGTTaGACAACCTACCCCACAGGT +
Preference number: 5 (lower is better)
Translates to: SLLRNWPKVLLLGSRVVRVALFG*TTYPTG
Trigger: ACCTGTGGGGTAGGTTGTCAAACCAAACAGAGCCAC...CCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp CTTCCCTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCGTGGCTCTGTTTGGTTaGACAACCTACCCCACAGGT +
Preference number: 5 (lower is better)
Translates to: LPSPHVALSSLLRNWPKVVALFG*TTYPTG
Trigger: ACCTGTGGGGTAGGTTGTCAAACCAAACAGAGCCAC...GACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGGGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp TCTCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGTCTGTCACCCATAGCTaGGTTGTTTGTCCCTCCCCT +
Preference number: 5 (lower is better)
Translates to: SLLRNWPKVLLLGSRVVRSVTHS*VVCPSP
Trigger: AGGGGAGGGACAAACAACCAAGCTATGGGTGACAGA...CCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp CCAGAACACCGTGATAGCAGGCTGATCAAACCGCTCACTTCCTCCCTGTTTTCCAGCAACTTGCCTTTCTaGCTGCTGAGCCACATGCCT +
Preference number: 5 (lower is better)
Translates to: PEHRDSRLIKPLTSSLFSSNLPF*LLSHMP
Trigger: AGGCATGTGGCTCAGCAGCAAGAAAGGCAAGTTGCT...GGAAAACAGGGAGGAAGTGAGCGGTTTGATCAGCCTGCTATCACGGTGTTCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp CTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCATCCCAGCAGGAGCAACTaGCCTTTCTTGCTGCTGAGC +
Preference number: 5 (lower is better)
Translates to: LRNWPKVLLLGSRVVRIHPSRSN*PFLLLS
Trigger: GCTCAGCAGCAAGAAAGGCAAGTTGCTCCTGCTGGG...ATGAATCCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp CCTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCCTCCAGAAGGAAGAGCACTTaGGAGGGACTTTGGTCACCA +
Preference number: 5 (lower is better)
Translates to: PLPTLHFLLSSEIGPKSSRRKST*EGLWSP
Trigger: TGGTGACCAAAGTCCCTCCAAAGTGCTCTTCCTTCT...GGAGGACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp TGCAGGCACCAGGAGAGAGCCTCTGTCACCCATAGCTTGGTTGTTTGTCCCTCCGAAGATAATTGGGGTTaGCTAGGGAATGAGGAGAGG +
Preference number: 5 (lower is better)
Translates to: CRHQERASVTHSLVVCPSEDNWG*LGNEER
Trigger: CCTCTCCTCATTCCCTAGCAAACCCCAATTATCTTC...GGAGGGACAAACAACCAAGCTATGGGTGACAGAGGCTCTCTCCTGGTGCCTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp ACAGGGCGATGCCATTGCAGACCCTCCCACTCCTGCTGGGGTCTTTGTAGAAGAGAAGATAATTGGGGTTaGCTAGGGAATGAGGAGAGG +
Preference number: 5 (lower is better)
Translates to: TGRCHCRPSHSCWGLCRREDNWG*LGNEER
Trigger: CCTCTCCTCATTCCCTAGCAAACCCCAATTATCTTC...TCTTCTACAAAGACCCCAGCAGGAGTGGGAGGGTCTGCAATGGCATCGCCCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp TTGATTTCCCCTTGCAAAGCAGTTGAGTTAGGGAGACAGAGCTTTTCCATTCCCCCCCAGCCAGGCTGCTaGAAGGGTCTGATACACCGC +
Preference number: 5 (lower is better)
Translates to: LISPCKAVELGRQSFSIPPQPGC*KGLIHR
Trigger: GCGGTGTATCAGACCCTTCAAGCAGCCTGGCTGGGG...GGGAATGGAAAAGCTCTGTCTCCCTAACTCAACTGCTTTGCAAGGGGAAATCAA
53% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp TCTCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGCCCAATCCTTCCCTCTaGCTCCCTTTGGGAAAAAGC +
Preference number: 5 (lower is better)
Translates to: SLLRNWPKVLLLGSRVVRPNPSL*LPLGKS
Trigger: GCTTTTTCCCAAAGGGAGCAAGAGGGAAGGATTGGG...CCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp CACATGCGCACACACGTCCTGTGTTACCACTGGCCAAGGAAACGCGAGTCTCAGGGAGTGAGACTAGATTaGATCACACTCACCACCCTT +
Preference number: 5 (lower is better)
Translates to: HMRTHVLCYHWPRKRESQGVRLD*ITLTTL
Trigger: AAGGGTGGTGAGTGTGATCAAATCTAGTCTCACTCC...CTGAGACTCGCGTTTCCTTGGCCAGTGGTAACACAGGACGTGTGTGCGCATGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp GCTATCGCTGAGACTCCACCAATTGGTTGGCCTACAGGCCTCACCTCCCGACTCGATTGGAAAACAAGCTaGGGACATCCCTCTACAGTA +
Preference number: 5 (lower is better)
Translates to: AIAETPPIGWPTGLTSRLDWKTS*GHPSTV
Trigger: TACTGTAGAGGGATGTCCCAAGCTTGTTTTCCAATC...GAGTCGGGAGGTGAGGCCTGTAGGCCAACCAATTGGTGGAGTCTCAGCGATAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS CCA 90 bp GACAGCATAGCTCCTAGTCAAGTCTGTCAGGGTGAGTTACCTTCCTaGCTTGGCAGTCCTTTCTTTAGTCTATCCAGAGTCCCTCTGCCC +
Preference number: 5 (lower is better)
Translates to: DSIAPSQVCQGELPS*LGSPFFSLSRVPLP
Trigger: GGGCAGAGGGACTCTGGATAGACTAAAGAAAGGACTGCCAAGCCAGGAAGGTAACTCACCCTGACAGACTTGACTAGGAGCTATGCTGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479185.1
CDS-3UTR CAA 90 bp TTGGAGGCTTTGGGTTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTACCCTGGTGGAGCCGTaGTCCTCGAGGCTTTTCCGT +
Preference number: 5 (lower is better)
Translates to: LEALGFCSFHLPRGIQVLTLVEP*SSRLFR
Trigger: ACGGAAAAGCCTCGAGGACAACGGCTCCACCAGGGT...AAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAACCCAAAGCCTCCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp TCTCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGCCAAATTCCAGTACCTaGGCATGGAGCTTCGTGATG +
Preference number: 5 (lower is better)
Translates to: SLLRNWPKVLLLGSRVVRPNSST*AWSFVM
Trigger: CATCACGAAGCTCCATGCCAAGGTACTGGAATTTGG...CCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp CTTCCCTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCCTGCCTCGGTTTCCCTaGTTGTGTAGAACAACGACA +
Preference number: 5 (lower is better)
Translates to: LPSPHVALSSLLRNWPKVLPRFP*LCRTTT
Trigger: TGTCGTTGTTCTACACAACAAGGGAAACCGAGGCAG...GACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGGGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp GACAGGAGCCCCAACATGAAGTTCTCAGTGCAAAGCTTTGGATTCTGGCTTGGCCATAGAACCGCTTCATaGCAAACCGGTCCAGAGCCT +
Preference number: 5 (lower is better)
Translates to: DRSPNMKFSVQSFGFWLGHRTAS*QTGPEP
Trigger: AGGCTCTGGACCGGTTTGCAATGAAGCGGTTCTATG...GCCAAGCCAGAATCCAAAGCTTTGCACTGAGAACTTCATGTTGGGGCTCCTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310858.10
CDS-3UTR CAA 90 bp AATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCATGGGTCCCATAGAACCGCTTCATaGCAAACCGGTCCAGAGCCT +
Preference number: 5 (lower is better)
Translates to: NWPKVLLLGSRVVRIHGSHRTAS*QTGPEP
Trigger: AGGCTCTGGACCGGTTTGCAATGAAGCGGTTCTATG...GGACCCATGAATCCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp GTACAGGAGTGGGGACGCGTCAGTGTACAATACATTCATGTCCAGGATAAGGAGATGCACGTACCTTCTTaGGGATGGCTGGCCAATGGG +
Preference number: 5 (lower is better)
Translates to: VQEWGRVSVQYIHVQDKEMHVPS*GWLANG
Trigger: CCCATTGGCCAGCCATCCCAAAGAAGGTACGTGCAT...CTCCTTATCCTGGACATGAATGTATTGTACACTGACGCGTCCCCACTCCTGTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp CCCAGCTTGATTTCCCCTTGCAAAGCAGTTGAGTTAGGGAGACAGAGCTTTTCCATGCACGTACCTTCTTaGGGATGGCTGGCCAATGGG +
Preference number: 5 (lower is better)
Translates to: PSLISPCKAVELGRQSFSMHVPS*GWLANG
Trigger: CCCATTGGCCAGCCATCCCAAAGAAGGTACGTGCAT...GGAAAAGCTCTGTCTCCCTAACTCAACTGCTTTGCAAGGGGAAATCAAGCTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp CCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGCCTTTAGACTCAAAGTaGGGGATGCCGTGCATGATC +
Preference number: 5 (lower is better)
Translates to: PRCTFFSPPKLAQSPPSGPLDSK*GMPCMI
Trigger: GATCATGCACGGCATCCCCAACTTTGAGTCTAAAGG...CCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp TCTCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGCCTTTAGACTCAAAGTaGGGGATGCCGTGCATGATC +
Preference number: 5 (lower is better)
Translates to: SLLRNWPKVLLLGSRVVRPLDSK*GMPCMI
Trigger: GATCATGCACGGCATCCCCAACTTTGAGTCTAAAGG...CCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp CTTCCCTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCCAGGTGCTCCATGCCTaGAATTTTCTCTGGCCCATA +
Preference number: 5 (lower is better)
Translates to: LPSPHVALSSLLRNWPKVQVLHA*NFLWPI
Trigger: TATGGGCCAGAGAAAATTCAAGGCATGGAGCACCTG...GACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGGGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp TTGGAGGCTTTGGGTTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTGTGTGTTCCACGTGGTaGGGGGTGGCCGACAGTGTA +
Preference number: 5 (lower is better)
Translates to: LEALGFCSFHLPRGIQVLVCSTW*GVADSV
Trigger: TACACTGTCGGCCACCCCCAACCACGTGGAACACAC...AAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAACCCAAAGCCTCCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp TTGATTTCCCCTTGCAAAGCAGTTGAGTTAGGGAGACAGAGCTTTTCCATTCCCGTGTGTTCCACGTGGTaGGGGGTGGCCGACAGTGTA +
Preference number: 5 (lower is better)
Translates to: LISPCKAVELGRQSFSIPVCSTW*GVADSV
Trigger: TACACTGTCGGCCACCCCCAACCACGTGGAACACAC...GGGAATGGAAAAGCTCTGTCTCCCTAACTCAACTGCTTTGCAAGGGGAAATCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp TTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTCTCCTCCATCTTTCGTGGAGGCTGTGGAGTaGCCCGAGTCGCTGCTCACA +
Preference number: 5 (lower is better)
Translates to: FLQFPSTQGNPSSSPPSFVEAVE*PESLLT
Trigger: TGTGAGCAGCGACTCGGGCAACTCCACAGCCTCCAC...GAAAGATGGAGGAGAAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp TCTCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGAGCTTCCGAAAAGGATaGAGAGCGGAACATACCGCT +
Preference number: 5 (lower is better)
Translates to: SLLRNWPKVLLLGSRVVRSFRKG*RAEHTA
Trigger: AGCGGTATGTTCCGCTCTCAATCCTTTTCGGAAGCT...CCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp TTGATTTCCCCTTGCAAAGCAGTTGAGTTAGGGAGACAGAGCTTTTCCATTCCCTGCAAATGGGGCTCTTaGGGCCGCCCTCCAGGATTG +
Preference number: 5 (lower is better)
Translates to: LISPCKAVELGRQSFSIPCKWGS*GRPPGL
Trigger: CAATCCTGGAGGGCGGCCCAAAGAGCCCCATTTGCA...GGGAATGGAAAAGCTCTGTCTCCCTAACTCAACTGCTTTGCAAGGGGAAATCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp ATGTCCAGGATAAGGAGCATACACCAGGATTTATACACGGTGGCAGCGGCTATAGTGGTGGCCACTTTGTaGTGGAGGCCAGAAACCTGG +
Preference number: 5 (lower is better)
Translates to: MSRIRSIHQDLYTVAAAIVVATL*WRPETW
Trigger: CCAGGTTTCTGGCCTCCACAACAAAGTGGCCACCAC...TATAGCCGCTGCCACCGTGTATAAATCCTGGTGTATGCTCCTTATCCTGGACAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp ATTTACAAAGGAAGGGGATGGGAAATATCTCCTATCTTGGAAGATAATTGGGGTGGAGGCCAGGTTGCCTaGGTGAGCCCCAGGGTGCCG +
Preference number: 5 (lower is better)
Translates to: IYKGRGWEISPILEDNWGGGQVA*VSPRVP
Trigger: CGGCACCCTGGGGCTCACCAAGGCAACCTGGCCTCC...ACCCCAATTATCTTCCAAGATAGGAGATATTTCCCATCCCCTTCCTTTGTAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp TCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTTCCAGGGCTGGCTATaGCATTGCTATGAAGACCGG +
Preference number: 5 (lower is better)
Translates to: SPPKLAQSPPSGFKSGQDFQGWL*HCYEDR
Trigger: CCGGTCTTCATAGCAATGCAATAGCCAGCCCTGGAA...ATCCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp CCATTCTGGCTTAGAGTCCTTAAATGGTGGTCAGGTGTTTTCCCAACTGTCCAGAGGTCTGCAGTTGAGTaGGCAGGGCCGGAGCTATCT +
Preference number: 5 (lower is better)
Translates to: PFWLRVLKWWSGVFPTVQRSAVE*AGPELS
Trigger: AGATAGCTCCGGCCCTGCCAACTCAACTGCAGACCT...CTGGACAGTTGGGAAAACACCTGACCACCATTTAAGGACTCTAAGCCAGAATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp AGGTGCCTTGGGTCTGAGATACTTTCAAGCAAACAAGTTCTTCCACTTGATGTCTCAGCAGGTCTGCAGTaGAGTTGGCAGGGCCGGAGC +
Preference number: 5 (lower is better)
Translates to: RCLGSEILSSKQVLPLDVSAGLQ*SWQGRS
Trigger: GCTCCGGCCCTGCCAACTCAACTGCAGACCTGCTGA...GACATCAAGTGGAAGAACTTGTTTGCTTGAAAGTATCTCAGACCCAAGGCACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp TCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTTGACGAAGAGCACATaGCAGGCTGCCCCTTGTTTC +
Preference number: 5 (lower is better)
Translates to: SPPKLAQSPPSGFKSGQDLTKST*QAAPCF
Trigger: GAAACAAGGGGCAGCCTGCAATGTGCTCTTCGTCAA...ATCCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp TTGATTTCCCCTTGCAAAGCAGTTGAGTTAGGGAGACAGAGCTTTTCCATTCCCACCTTGGAGACGAAGTaGACGATGGCAGAGGCCGGC +
Preference number: 5 (lower is better)
Translates to: LISPCKAVELGRQSFSIPTLETK*TMAEAG
Trigger: GCCGGCCTCTGCCATCGTCAACTTCGTCTCCAAGGT...GGGAATGGAAAAGCTCTGTCTCCCTAACTCAACTGCTTTGCAAGGGGAAATCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp CCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGGCATTCAGCATGACCTaGGAGACGAAGTTGACGATG +
Preference number: 5 (lower is better)
Translates to: PRCTFFSPPKLAQSPPSGAFSMT*ETKLTM
Trigger: CATCGTCAACTTCGTCTCCAAGGTCATGCTGAATGC...CCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp CTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCATTTCCCTCTCCCCACGTaGCACTTTCTTCTCTCCTCC +
Preference number: 5 (lower is better)
Translates to: LRNWPKVLLLGSRVVRIHFPLPT*HFLLSS
Trigger: GGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGGGAA...ATGAATCCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp CTTCCCTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCGGAGGCTTTGGGTTTTaGCAGTTTCCATCTACCCAG +
Preference number: 5 (lower is better)
Translates to: LPSPHVALSSLLRNWPKVGGFGF*QFPSTQ
Trigger: CTGGGTAGATGGAAACTGCAAAAACCCAAAGCCTCC...GACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGGGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp ATGTCCCACGGTGGCTCTGTTTGGTTTGACAACCTACCCCACAGGTGGCCAGAATGGACCTGGTTAGTTTaGGAGGCTTTGGGTTTTTGC +
Preference number: 5 (lower is better)
Translates to: MSHGGSVWFDNLPHRWPEWTWLV*EALGFC
Trigger: GCAAAAACCCAAAGCCTCCAAAACTAACCAGGTCCA...TTCTGGCCACCTGTGGGGTAGGTTGTCAAACCAAACAGAGCCACCGTGGGACAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp GGGGAAGACACCCCGAGCTCAACAGCTGCCTGTTCTGACAGATCTCTTCCTATGTGGACCTGGTTAGTTTaGGAGGCTTTGGGTTTTTGC +
Preference number: 5 (lower is better)
Translates to: GEDTPSSTAACSDRSLPMWTWLV*EALGFC
Trigger: GCAAAAACCCAAAGCCTCCAAAACTAACCAGGTCCA...CATAGGAAGAGATCTGTCAGAACAGGCAGCTGTTGAGCTCGGGGTGTCTTCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp AGGTGCCTTGGGTCTGAGATACTTTCAAGCAAACAAGTTCTTCCACTTGATGTCGCTGAGCCACATGCCTaGGGGAAGACACCCCGAGCT +
Preference number: 5 (lower is better)
Translates to: RCLGSEILSSKQVLPLDVAEPHA*GKTPRA
Trigger: AGCTCGGGGTGTCTTCCCCAAGGCATGTGGCTCAGC...GACATCAAGTGGAAGAACTTGTTTGCTTGAAAGTATCTCAGACCCAAGGCACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp CCATTCTGGCTTAGAGTCCTTAAATGGTGGTCAGGTGTTTTCCCAACTGTCCAGCCCAGCAGGAGCAACTaGCCTTTCTTGCTGCTGAGC +
Preference number: 5 (lower is better)
Translates to: PFWLRVLKWWSGVFPTVQPSRSN*PFLLLS
Trigger: GCTCAGCAGCAAGAAAGGCAAGTTGCTCCTGCTGGG...CTGGACAGTTGGGAAAACACCTGACCACCATTTAAGGACTCTAAGCCAGAATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp CCAGAACACCGTGATAGCAGGCTGATCAAACCGCTCACTTCCTCCCTGTTTTCCAGAAGGAAGAGCACTTaGGAGGGACTTTGGTCACCA +
Preference number: 5 (lower is better)
Translates to: PEHRDSRLIKPLTSSLFSRRKST*EGLWSP
Trigger: TGGTGACCAAAGTCCCTCCAAAGTGCTCTTCCTTCT...GGAAAACAGGGAGGAAGTGAGCGGTTTGATCAGCCTGCTATCACGGTGTTCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp AAGAGAAGGGTCTGGCGGCACCCAGGGTCACTAGAGTGCAGGTGCAGGCACCAGGAAATATCTCCTATCTaGGAAGATAATTGGGGTTTG +
Preference number: 5 (lower is better)
Translates to: KRRVWRHPGSLECRCRHQEISPI*EDNWGL
Trigger: CAAACCCCAATTATCTTCCAAGATAGGAGATATTTC...CTGGTGCCTGCACCTGCACTCTAGTGACCCTGGGTGCCGCCAGACCCTTCTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp GCAGACCCTCCCACTCCTGCTGGGGTCTTTGTAGAAGAGAAGGGTCTGGCGGCAAGGGATTTCTTACATTaGTTCTCAATGATGGGTCTG +
Preference number: 5 (lower is better)
Translates to: ADPPTPAGVFVEEKGLAARDFLH*FSMMGL
Trigger: CAGACCCATCATTGAGAACAAATGTAAGAAATCCCT...TGCCGCCAGACCCTTCTCTTCTACAAAGACCCCAGCAGGAGTGGGAGGGTCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS TCA 90 bp CCTATCCTGCCTCGGTTTCCCTTGTTGTGTAGAACAACGACATTGTaGGGGTCTGCATTGAGCCATGTGTCCATGGCCTTACAGATGCTG +
Preference number: 5 (lower is better)
Translates to: PILPRFPLLCRTTTL*GSALSHVSMALQML
Trigger: CAGCATCTGTAAGGCCATGGACACATGGCTCAATGCAGACCCTCACAATGTCGTTGTTCTACACAACAAGGGAAACCGAGGCAGGATAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000171887.8
ENST00000310858.10
ENST00000413554.5
ENST00000419504.5
ENST00000430930.5
ENST00000446903.5
ENST00000492338.2
ENST00000611415.4
ENST00000615025.5
ENST00000646520.1
ENST00000651849.1
ENST00000682258.1
CDS TCA 90 bp TGGGTGCAAGGAATCAATCAAGTGGTAAATGTGTGGGTACACGGATaGATAGATGAGTCACAGGAAGGAGAACCCCACCGAGGAGCAGGC +
Preference number: 5 (lower is better)
Translates to: WVQGINQVVNVWVHG*IDESQEGEPHRGAG
Trigger: GCCTGCTCCTCGGTGGGGTTCTCCTTCCTGTGACTCATCTATTCATCCGTGTACCCACACATTTACCACTTGATTGATTCCTTGCACCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480416.1
CDS GCA 90 bp CCTCCTTTAGACTCAAAGTTGGGGATGCCGTGCATGATCACGTGGTaGAGAAACAAGGGCTTGTTGTTCATTTTGATGGAGCCGGAGAGC +
Preference number: 5 (lower is better)
Translates to: PPLDSKLGMPCMITW*RNKGLLFILMEPES
Trigger: GCTCTCCGGCTCCATCAAAATGAACAACAAGCCCTTGTTTCTGCACCACGTGATCATGCACGGCATCCCCAACTTTGAGTCTAAAGGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000171887.8
ENST00000310858.10
ENST00000413554.5
ENST00000419504.5
ENST00000430930.5
ENST00000446903.5
ENST00000611415.4
ENST00000615025.5
ENST00000646520.1
ENST00000651849.1
ENST00000682258.1
CDS-3UTR CAA 90 bp TCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATGAGGCTCCTTCTCCCTaGTCCACTACATTCTTTGGT +
Preference number: 5 (lower is better)
Translates to: SPPKLAQSPPSGFKSGQDEAPSP*STTFFG
Trigger: ACCAAAGAATGTAGTGGACAAGGGAGAAGGAGCCTC...ATCCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp GTTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTCTCCTCCATCTTTACCCTGGTGGAGCCGTaGTCCTCGAGGCTTTTCCGT +
Preference number: 5 (lower is better)
Translates to: VFAVSIYPGESKFFSSIFTLVEP*SSRLFR
Trigger: ACGGAAAAGCCTCGAGGACAACGGCTCCACCAGGGT...AAAGATGGAGGAGAAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp GTTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTCTCCTCCATCTTTGCCACCTCACGGAGGTaGCTCCGGAAGTTCTCCTCA +
Preference number: 5 (lower is better)
Translates to: VFAVSIYPGESKFFSSIFATSRR*LRKFSS
Trigger: TGAGGAGAACTTCCGGAGCAACCTCCGTGAGGTGGC...AAAGATGGAGGAGAAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp ATGTCCAGGATAAGGAGCATACACCAGGATTTATACACGGTGGCAGCGGCTATACCTCCATGTTTGGACTaGAGCATCTGCGCCACCTCA +
Preference number: 5 (lower is better)
Translates to: MSRIRSIHQDLYTVAAAIPPCLD*SICATS
Trigger: TGAGGTGGCGCAGATGCTCAAGTCCAAACATGGAGG...TATAGCCGCTGCCACCGTGTATAAATCCTGGTGTATGCTCCTTATCCTGGACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp CACAGGGCAGAGTCCAGGAGCCAGAACACTTCCTTGGCTTGGAAAAGGAAAAAGCCAAATTCCAGTACCTaGGCATGGAGCTTCGTGATG +
Preference number: 5 (lower is better)
Translates to: HRAESRSQNTSLAWKRKKPNSST*AWSFVM
Trigger: CATCACGAAGCTCCATGCCAAGGTACTGGAATTTGG...CTTTTTCCTTTTCCAAGCCAAGGAAGTGTTCTGGCTCCTGGACTCTGCCCTGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310858.10
CDS-3UTR CAA 90 bp CCAGAACACCGTGATAGCAGGCTGATCAAACCGCTCACTTCCTCCCTGTTTTCCCCTCGGTTTCCCTTGTaGTGTAGAACAACGACATTG +
Preference number: 5 (lower is better)
Translates to: PEHRDSRLIKPLTSSLFSPRFPL*CRTTTL
Trigger: CAATGTCGTTGTTCTACACAACAAGGGAAACCGAGG...GGAAAACAGGGAGGAAGTGAGCGGTTTGATCAGCCTGCTATCACGGTGTTCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp ACCCTCCTTTCCAACTCCCTGAAACAGAACGTCCACACTGACACAGCTCCTTGGCCTCGGTTTCCCTTGTaGTGTAGAACAACGACATTG +
Preference number: 5 (lower is better)
Translates to: TLLSNSLKQNVHTDTAPWPRFPL*CRTTTL
Trigger: CAATGTCGTTGTTCTACACAACAAGGGAAACCGAGG...CCAAGGAGCTGTGTCAGTGTGGACGTTCTGTTTCAGGGAGTTGGAAAGGAGGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp CTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCATCATAGAACCGCTTCATaGCAAACCGGTCCAGAGCCT +
Preference number: 5 (lower is better)
Translates to: LRNWPKVLLLGSRVVRIHHRTAS*QTGPEP
Trigger: AGGCTCTGGACCGGTTTGCAATGAAGCGGTTCTATG...ATGAATCCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp GACAGGAGCCCCAACATGAAGTTCTCAGTGCAAAGCTTTGGATTCTGGCTTGGCCCTTTAGACTCAAAGTaGGGGATGCCGTGCATGATC +
Preference number: 5 (lower is better)
Translates to: DRSPNMKFSVQSFGFWLGPLDSK*GMPCMI
Trigger: GATCATGCACGGCATCCCCAACTTTGAGTCTAAAGG...GCCAAGCCAGAATCCAAAGCTTTGCACTGAGAACTTCATGTTGGGGCTCCTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310858.10
CDS-3UTR CAA 90 bp GGGCGATGCCATTGCAGACCCTCCCACTCCTGCTGGGGTCTTTGTAGAAGAGAAGGAAATCGATCATCTTaGAAAGCATCATCAAGGTCC +
Preference number: 5 (lower is better)
Translates to: GRCHCRPSHSCWGLCRREGNRSS*KASSRS
Trigger: GGACCTTGATGATGCTTTCAAAGATGATCGATTTCC...TTCTCTTCTACAAAGACCCCAGCAGGAGTGGGAGGGTCTGCAATGGCATCGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp GGACAGGAGCCCCAACATGAAGTTCTCAGTGCAAAGCTTTGGATTCTGGCTTGGCAGGTGCTCCATGCCTaGAATTTTCTCTGGCCCATA +
Preference number: 5 (lower is better)
Translates to: GQEPQHEVLSAKLWILAWQVLHA*NFLWPI
Trigger: TATGGGCCAGAGAAAATTCAAGGCATGGAGCACCTG...CCAAGCCAGAATCCAAAGCTTTGCACTGAGAACTTCATGTTGGGGCTCCTGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310858.10
CDS-3UTR CAA 90 bp AATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCATGGGTCCCAGGTGCTCCATGCCTaGAATTTTCTCTGGCCCATA +
Preference number: 5 (lower is better)
Translates to: NWPKVLLLGSRVVRIHGSQVLHA*NFLWPI
Trigger: TATGGGCCAGAGAAAATTCAAGGCATGGAGCACCTG...GGACCCATGAATCCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp GTTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTCTCCTCCATCTTTGTGTGTTCCACGTGGTaGGGGGTGGCCGACAGTGTA +
Preference number: 5 (lower is better)
Translates to: VFAVSIYPGESKFFSSIFVCSTW*GVADSV
Trigger: TACACTGTCGGCCACCCCCAACCACGTGGAACACAC...AAAGATGGAGGAGAAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp AGGTGCCTTGGGTCTGAGATACTTTCAAGCAAACAAGTTCTTCCACTTGATGTCACAGGCTCGTCGGTCTaGTCGGTCTTGGTGGAGGCT +
Preference number: 5 (lower is better)
Translates to: RCLGSEILSSKQVLPLDVTGSSV*SVLVEA
Trigger: AGCCTCCACCAAGACCGACAAGACCGACGAGCCTGT...GACATCAAGTGGAAGAACTTGTTTGCTTGAAAGTATCTCAGACCCAAGGCACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp TTGGGTTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTCTCCTCCATGTGGTGGCCACTTTGTaGTGGAGGCCAGAAACCTGG +
Preference number: 5 (lower is better)
Translates to: LGFCSFHLPRGIQVLLLHVVATL*WRPETW
Trigger: CCAGGTTTCTGGCCTCCACAACAAAGTGGCCACCAC...ATGGAGGAGAAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAACCCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp TTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTCTCCTCCATCTTTCGGGGTGGTGGCCACTTaGTTGTGGAGGCCAGAAACC +
Preference number: 5 (lower is better)
Translates to: FLQFPSTQGNPSSSPPSFGVVAT*LWRPET
Trigger: GGTTTCTGGCCTCCACAACAAAGTGGCCACCACCCC...GAAAGATGGAGGAGAAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp GTACAGGAGTGGGGACGCGTCAGTGTACAATACATTCATGTCCAGGATAAGGAGTTCCAGGGCTGGCTATaGCATTGCTATGAAGACCGG +
Preference number: 5 (lower is better)
Translates to: VQEWGRVSVQYIHVQDKEFQGWL*HCYEDR
Trigger: CCGGTCTTCATAGCAATGCAATAGCCAGCCCTGGAA...CTCCTTATCCTGGACATGAATGTATTGTACACTGACGCGTCCCCACTCCTGTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp ATGTCCCACGGTGGCTCTGTTTGGTTTGACAACCTACCCCACAGGTGGCCAGAACTGGAGATCTCAGGCTaGTACCAATACTTAGAAGTG +
Preference number: 5 (lower is better)
Translates to: MSHGGSVWFDNLPHRWPELEISG*YQYLEV
Trigger: CACTTCTAAGTATTGGTACAAGCCTGAGATCTCCAG...TTCTGGCCACCTGTGGGGTAGGTTGTCAAACCAAACAGAGCCACCGTGGGACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp TTGGAGGCTTTGGGTTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTACAGCGATCCGAAGTTaGGCTCATTGGGGCAGCCCT +
Preference number: 5 (lower is better)
Translates to: LEALGFCSFHLPRGIQVLTAIRS*AHWGSP
Trigger: AGGGCTGCCCCAATGAGCCAAACTTCGGATCGCTGT...AAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAACCCAAAGCCTCCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp TTGATTTCCCCTTGCAAAGCAGTTGAGTTAGGGAGACAGAGCTTTTCCATTCCCAGGTCTGCAGTTGAGTaGGCAGGGCCGGAGCTATCT +
Preference number: 5 (lower is better)
Translates to: LISPCKAVELGRQSFSIPRSAVE*AGPELS
Trigger: AGATAGCTCCGGCCCTGCCAACTCAACTGCAGACCT...GGGAATGGAAAAGCTCTGTCTCCCTAACTCAACTGCTTTGCAAGGGGAAATCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp GCAATTCACTTCCCTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCTCCATGTCCACAGAGTaGACGAAGAGCACATTGCAG +
Preference number: 5 (lower is better)
Translates to: AIHFPLPTLHFLLSSEIGSMSTE*TKSTLQ
Trigger: CTGCAATGTGCTCTTCGTCAACTCTGTGGACATGGA...GCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGGGAAGTGAATTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp TCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCCATGTCCACAGAGTaGACGAAGAGCACATTGCAG +
Preference number: 5 (lower is better)
Translates to: SPPKLAQSPPSGFKSGQDSMSTE*TKSTLQ
Trigger: CTGCAATGTGCTCTTCGTCAACTCTGTGGACATGGA...ATCCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp CCAGAACACCGTGATAGCAGGCTGATCAAACCGCTCACTTCCTCCCTGTTTTCCAAGAGCTTTCTCTGGTaGTCAGTCAGAGTGATTCCC +
Preference number: 5 (lower is better)
Translates to: PEHRDSRLIKPLTSSLFSKSFLW*SVRVIP
Trigger: GGGAATCACTCTGACTGACAACCAGAGAAAGCTCTT...GGAAAACAGGGAGGAAGTGAGCGGTTTGATCAGCCTGCTATCACGGTGTTCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp CCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGAAGAGCTTTCTCTGGTaGTCAGTCAGAGTGATTCCC +
Preference number: 5 (lower is better)
Translates to: PRCTFFSPPKLAQSPPSGKSFLW*SVRVIP
Trigger: GGGAATCACTCTGACTGACAACCAGAGAAAGCTCTT...CCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp GTTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTCTCCTCCATCTTTACCTTGGAGACGAAGTaGACGATGGCAGAGGCCGGC +
Preference number: 5 (lower is better)
Translates to: VFAVSIYPGESKFFSSIFTLETK*TMAEAG
Trigger: GCCGGCCTCTGCCATCGTCAACTTCGTCTCCAAGGT...AAAGATGGAGGAGAAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp GCAATTCACTTCCCTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCGCATTCAGCATGACCTaGGAGACGAAGTTGACGATG +
Preference number: 5 (lower is better)
Translates to: AIHFPLPTLHFLLSSEIGAFSMT*ETKLTM
Trigger: CATCGTCAACTTCGTCTCCAAGGTCATGCTGAATGC...GCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGGGAAGTGAATTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp TCTGCAATTCACTTCCCTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATTTTCCCTCTCCCCACGTaGCACTTTCTTCTCTCCTCC +
Preference number: 5 (lower is better)
Translates to: SAIHFPLPTLHFLLSSEIFPLPT*HFLLSS
Trigger: GGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGGGAA...AATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGGGAAGTGAATTGCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp ACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTTTCCCTCTCCCCACGTaGCACTTTCTTCTCTCCTCC +
Preference number: 5 (lower is better)
Translates to: TFFSPPKLAQSPPSGFKSFPLPT*HFLLSS
Trigger: GGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGGGAA...ACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp ATGTCCAGGATAAGGAGCATACACCAGGATTTATACACGGTGGCAGCGGCTATATTCCCTCTCCCCACGTaGCACTTTCTTCTCTCCTCC +
Preference number: 5 (lower is better)
Translates to: MSRIRSIHQDLYTVAAAIFPLPT*HFLLSS
Trigger: GGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGGGAA...TATAGCCGCTGCCACCGTGTATAAATCCTGGTGTATGCTCCTTATCCTGGACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp CTTCCCTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCTGGACCTGGTTAGTTTaGGAGGCTTTGGGTTTTTGC +
Preference number: 5 (lower is better)
Translates to: LPSPHVALSSLLRNWPKVWTWLV*EALGFC
Trigger: GCAAAAACCCAAAGCCTCCAAAACTAACCAGGTCCA...GACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGGGAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp GTGAGGAAGGGAAAAGCGACCGTGAAAGCTGACCCCAGACTCAGTCCTGGGCCCTTTGTTCCTTCTCTTTaGAGGACATCCATCTTCTTA +
Preference number: 5 (lower is better)
Translates to: VRKGKATVKADPRLSPGPFVPSL*RTSIFL
Trigger: TAAGAAGATGGATGTCCTCAAAAGAGAAGGAACAAA...GGGCCCAGGACTGAGTCTGGGGTCAGCTTTCACGGTCGCTTTTCCCTTCCTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp GCAGACCCTCCCACTCCTGCTGGGGTCTTTGTAGAAGAGAAGGGTCTGGCGGCATTTGTTCCTTCTCTTTaGAGGACATCCATCTTCTTA +
Preference number: 5 (lower is better)
Translates to: ADPPTPAGVFVEEKGLAAFVPSL*RTSIFL
Trigger: TAAGAAGATGGATGTCCTCAAAAGAGAAGGAACAAA...TGCCGCCAGACCCTTCTCTTCTACAAAGACCCCAGCAGGAGTGGGAGGGTCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp TTGATTTCCCCTTGCAAAGCAGTTGAGTTAGGGAGACAGAGCTTTTCCATTCCCTGGACCTTAGGCCCTTaGGCCCAAGTGCAAGCCTTC +
Preference number: 5 (lower is better)
Translates to: LISPCKAVELGRQSFSIPWTLGP*AQVQAF
Trigger: GAAGGCTTGCACTTGGGCCAAAGGGCCTAAGGTCCA...GGGAATGGAAAAGCTCTGTCTCCCTAACTCAACTGCTTTGCAAGGGGAAATCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp ACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTTCCCTCTTGCTCCCTTaGGGAAAAAGCCACGTGGAG +
Preference number: 5 (lower is better)
Translates to: TFFSPPKLAQSPPSGFKSSLLLP*GKSHVE
Trigger: CTCCACGTGGCTTTTTCCCAAAGGGAGCAAGAGGGA...ACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp GGACAGGAGCCCCAACATGAAGTTCTCAGTGCAAAGCTTTGGATTCTGGCTTGGCCAACTCTTTTTGCCTaGGTCCTCATTGCAGGCAAG +
Preference number: 5 (lower is better)
Translates to: GQEPQHEVLSAKLWILAWPTLFA*VLIAGK
Trigger: CTTGCCTGCAATGAGGACCAAGGCAAAAAGAGTTGG...CCAAGCCAGAATCCAAAGCTTTGCACTGAGAACTTCATGTTGGGGCTCCTGTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310858.10
CDS-3UTR CAA 90 bp TCTAGATCAATGTGTGAGGATGTGGGTGCAGACACACACCCACACGACAATATACACGAGAAGAGGTACTaGCCCCATCGGATCACGCAG +
Preference number: 5 (lower is better)
Translates to: SRSMCEDVGADTHPHDNIHEKRY*PHRITQ
Trigger: CTGCGTGATCCGATGGGGCAAGTACCTCTTCTCGTG...TATATTGTCGTGTGGGTGTGTGTCTGCACCCACATCCTCACACATTGATCTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646520.1
CDS CCA 90 bp CATCCTCCTTTAGACTCAAAGTTGGGGATGCCGTGCATGATCACGTaGTGCAGAAACAAGGGCTTGTTGTTCATTTTGATGGAGCCGGAG +
Preference number: 5 (lower is better)
Translates to: HPPLDSKLGMPCMIT*CRNKGLLFILMEPE
Trigger: CTCCGGCTCCATCAAAATGAACAACAAGCCCTTGTTTCTGCACCACGTGATCATGCACGGCATCCCCAACTTTGAGTCTAAAGGAGGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000171887.8
ENST00000310858.10
ENST00000413554.5
ENST00000419504.5
ENST00000430930.5
ENST00000446903.5
ENST00000611415.4
ENST00000615025.5
ENST00000646520.1
ENST00000651849.1
ENST00000682258.1
CDS CCA 90 bp GAGCCCCAACATGAAGTTCTCAGTGCAAAGCTTTGGATTCTGGCTTaGCAACTTGACATTTTGGAGGGCCTAACTTTGGGAAGGCCAGTG +
Preference number: 5 (lower is better)
Translates to: EPQHEVLSAKLWILA*QLDILEGLTLGRPV
Trigger: CACTGGCCTTCCCAAAGTTAGGCCCTCCAAAATGTCAAGTTGCCAAGCCAGAATCCAAAGCTTTGCACTGAGAACTTCATGTTGGGGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310858.10
CDS CCA 90 bp TCACACAGGATTAGGGTGAGCCTTAATCCAGTATGCCTGTATGCCTaGTGTCCTTACAAGGAGAGGAGACAGAGATACACACAGGGGAGA +
Preference number: 5 (lower is better)
Translates to: SHRIRVSLNPVCLYA*CPYKERRQRYTQGR
Trigger: TCTCCCCTGTGTGTATCTCTGTCTCCTCTCCTTGTAAGGACACCAGGCATACAGGCATACTGGATTAAGGCTCACCCTAATCCTGTGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495556.1
CDS-3UTR CAA 90 bp CTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCATGAGGCTCCTTCTCCCTaGTCCACTACATTCTTTGGT +
Preference number: 5 (lower is better)
Translates to: LRNWPKVLLLGSRVVRIHEAPSP*STTFFG
Trigger: ACCAAAGAATGTAGTGGACAAGGGAGAAGGAGCCTC...ATGAATCCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp TTGGGTTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTCTCCTCCATCCTCCATGTTTGGACTaGAGCATCTGCGCCACCTCA +
Preference number: 5 (lower is better)
Translates to: LGFCSFHLPRGIQVLLLHPPCLD*SICATS
Trigger: TGAGGTGGCGCAGATGCTCAAGTCCAAACATGGAGG...ATGGAGGAGAAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAACCCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp TCTAGATCAATGTGTGAGGATGTGGGTGCAGACACACACCCACACGACAATATACCTCCATGTTTGGACTaGAGCATCTGCGCCACCTCA +
Preference number: 5 (lower is better)
Translates to: SRSMCEDVGADTHPHDNIPPCLD*SICATS
Trigger: TGAGGTGGCGCAGATGCTCAAGTCCAAACATGGAGG...TATATTGTCGTGTGGGTGTGTGTCTGCACCCACATCCTCACACATTGATCTAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp CCCAGCTTGATTTCCCCTTGCAAAGCAGTTGAGTTAGGGAGACAGAGCTTTTCCCCAAATTCCAGTACCTaGGCATGGAGCTTCGTGATG +
Preference number: 5 (lower is better)
Translates to: PSLISPCKAVELGRQSFSPNSST*AWSFVM
Trigger: CATCACGAAGCTCCATGCCAAGGTACTGGAATTTGG...GGAAAAGCTCTGTCTCCCTAACTCAACTGCTTTGCAAGGGGAAATCAAGCTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp GGACAGGAGCCCCAACATGAAGTTCTCAGTGCAAAGCTTTGGATTCTGGCTTGGCCTCGGTTTCCCTTGTaGTGTAGAACAACGACATTG +
Preference number: 5 (lower is better)
Translates to: GQEPQHEVLSAKLWILAWPRFPL*CRTTTL
Trigger: CAATGTCGTTGTTCTACACAACAAGGGAAACCGAGG...CCAAGCCAGAATCCAAAGCTTTGCACTGAGAACTTCATGTTGGGGCTCCTGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310858.10
CDS-3UTR CAA 90 bp AGCCCCAACATGAAGTTCTCAGTGCAAAGCTTTGGATTCTGGCTTGGCAACTTGGGCTTGTTGTTCATTTaGATGGAGCCGGAGAGCAGG +
Preference number: 5 (lower is better)
Translates to: SPNMKFSVQSFGFWLGNLGLLFI*MEPESR
Trigger: CCTGCTCTCCGGCTCCATCAAAATGAACAACAAGCC...CAAGTTGCCAAGCCAGAATCCAAAGCTTTGCACTGAGAACTTCATGTTGGGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310858.10
CDS-3UTR CAA 90 bp GATCTAGATCAATGTGTGAGGATGTGGGTGCAGACACACACCCACACGACAATAGGCTTGTTGTTCATTTaGATGGAGCCGGAGAGCAGG +
Preference number: 5 (lower is better)
Translates to: DLDQCVRMWVQTHTHTTIGLLFI*MEPESR
Trigger: CCTGCTCTCCGGCTCCATCAAAATGAACAACAAGCC...TATTGTCGTGTGGGTGTGTGTCTGCACCCACATCCTCACACATTGATCTAGATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp CGATGCCATTGCAGACCCTCCCACTCCTGCTGGGGTCTTTGTAGAAGAGAAGGGAATACAAACTCCACTTaGCCATACTCTGGAAATCGA +
Preference number: 5 (lower is better)
Translates to: RCHCRPSHSCWGLCRREGNTNST*PYSGNR
Trigger: TCGATTTCCAGAGTATGGCAAAGTGGAGTTTGTATT...CCCTTCTCTTCTACAAAGACCCCAGCAGGAGTGGGAGGGTCTGCAATGGCATCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp CAGCACAACGACCAATTAGGCTGGCAGCCACTGAAACCTCAGAACAAATTCGCTCAGGTGCTCCATGCCTaGAATTTTCTCTGGCCCATA +
Preference number: 5 (lower is better)
Translates to: QHNDQLGWQPLKPQNKFAQVLHA*NFLWPI
Trigger: TATGGGCCAGAGAAAATTCAAGGCATGGAGCACCTG...AGCGAATTTGTTCTGAGGTTTCAGTGGCTGCCAGCCTAATTGGTCGTTGTGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453356.1
CDS-3UTR CAA 90 bp CCCAGCTTGATTTCCCCTTGCAAAGCAGTTGAGTTAGGGAGACAGAGCTTTTCCTGTGACCATCCTGGTTaGGCAATTCATCGTCCAGGA +
Preference number: 5 (lower is better)
Translates to: PSLISPCKAVELGRQSFSCDHPG*AIHRPG
Trigger: TCCTGGACGATGAATTGCCAAACCAGGATGGTCACA...GGAAAAGCTCTGTCTCCCTAACTCAACTGCTTTGCAAGGGGAAATCAAGCTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp CCCAGCTTGATTTCCCCTTGCAAAGCAGTTGAGTTAGGGAGACAGAGCTTTTCCAGCTTCCGAAAAGGATaGAGAGCGGAACATACCGCT +
Preference number: 5 (lower is better)
Translates to: PSLISPCKAVELGRQSFSSFRKG*RAEHTA
Trigger: AGCGGTATGTTCCGCTCTCAATCCTTTTCGGAAGCT...GGAAAAGCTCTGTCTCCCTAACTCAACTGCTTTGCAAGGGGAAATCAAGCTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp CCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTCCAGCATCAGCATATaGAGTGTTTCGATGGACTGT +
Preference number: 5 (lower is better)
Translates to: PRCTFFSPPKLAQSPPSGSSISI*SVSMDC
Trigger: ACAGTCCATCGAAACACTCAATATGCTGATGCTGGA...CCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp CCAGAACACCGTGATAGCAGGCTGATCAAACCGCTCACTTCCTCCCTGTTTTCCTCCAGCATCAGCATATaGAGTGTTTCGATGGACTGT +
Preference number: 5 (lower is better)
Translates to: PEHRDSRLIKPLTSSLFSSSISI*SVSMDC
Trigger: ACAGTCCATCGAAACACTCAATATGCTGATGCTGGA...GGAAAACAGGGAGGAAGTGAGCGGTTTGATCAGCCTGCTATCACGGTGTTCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp TCTGCAATTCACTTCCCTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATTTTCCAGGGCTGGCTATaGCATTGCTATGAAGACCGG +
Preference number: 5 (lower is better)
Translates to: SAIHFPLPTLHFLLSSEIFQGWL*HCYEDR
Trigger: CCGGTCTTCATAGCAATGCAATAGCCAGCCCTGGAA...AATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGGGAAGTGAATTGCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp TTGGAGGCTTTGGGTTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTTCTGGCATGGAGTACTaGGAGAAGTCGGGCAGAGTG +
Preference number: 5 (lower is better)
Translates to: LEALGFCSFHLPRGIQVLSGMEY*EKSGRV
Trigger: CACTCTGCCCGACTTCTCCAAGTACTCCATGCCAGA...AAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAACCCAAAGCCTCCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp CCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGCTGGAGATCTCAGGCTaGTACCAATACTTAGAAGTG +
Preference number: 5 (lower is better)
Translates to: PRCTFFSPPKLAQSPPSGLEISG*YQYLEV
Trigger: CACTTCTAAGTATTGGTACAAGCCTGAGATCTCCAG...CCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp TTGGAGGCTTTGGGTTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTTTTGGAATGACCAGCTaGCAAGGCAGGGCCAATGGG +
Preference number: 5 (lower is better)
Translates to: LEALGFCSFHLPRGIQVLFGMTS*QGRANG
Trigger: CCCATTGGCCCTGCCTTGCAAGCTGGTCATTCCAAA...AAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAACCCAAAGCCTCCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp GAAATCTTTGGCAAGAATATACTGCAGTGCGGAGTGTTGTGTGTGCGTAGGTGTTTTGGAATGACCAGCTaGCAAGGCAGGGCCAATGGG +
Preference number: 5 (lower is better)
Translates to: EIFGKNILQCGVLCVRRCFGMTS*QGRANG
Trigger: CCCATTGGCCCTGCCTTGCAAGCTGGTCATTCCAAA...ACACCTACGCACACACAACACTCCGCACTGCAGTATATTCTTGCCAAAGATTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp TCTAGATCAATGTGTGAGGATGTGGGTGCAGACACACACCCACACGACAATATATTTGGAATGACCAGCTaGCAAGGCAGGGCCAATGGG +
Preference number: 5 (lower is better)
Translates to: SRSMCEDVGADTHPHDNIFGMTS*QGRANG
Trigger: CCCATTGGCCCTGCCTTGCAAGCTGGTCATTCCAAA...TATATTGTCGTGTGGGTGTGTGTCTGCACCCACATCCTCACACATTGATCTAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp TTGGGTTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTCTCCTCCATATTGCAGGCTGCCCCTaGTTTCAGCAGGTCTGCAGT +
Preference number: 5 (lower is better)
Translates to: LGFCSFHLPRGIQVLLLHIAGCP*FQQVCS
Trigger: ACTGCAGACCTGCTGAAACAAGGGGCAGCCTGCAAT...ATGGAGGAGAAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAACCCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp TCTGCAATTCACTTCCCTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATTTTGACGAAGAGCACATaGCAGGCTGCCCCTTGTTTC +
Preference number: 5 (lower is better)
Translates to: SAIHFPLPTLHFLLSSEILTKST*QAAPCF
Trigger: GAAACAAGGGGCAGCCTGCAATGTGCTCTTCGTCAA...AATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGGGAAGTGAATTGCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp AGATCTAGATCAATGTGTGAGGATGTGGGTGCAGACACACACCCACACGACAATCAGGGTTCATCTCTTTaGGCCGGCATTCAGCATGAC +
Preference number: 5 (lower is better)
Translates to: RSRSMCEDVGADTHPHDNQGSSL*AGIQHD
Trigger: GTCATGCTGAATGCCGGCCAAAAGAGATGAACCCTG...ATTGTCGTGTGGGTGTGTGTCTGCACCCACATCCTCACACATTGATCTAGATCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp GCTATCGCTGAGACTCCACCAATTGGTTGGCCTACAGGCCTCACCTCCCGACTCTTTGTTCCTTCTCTTTaGAGGACATCCATCTTCTTA +
Preference number: 5 (lower is better)
Translates to: AIAETPPIGWPTGLTSRLFVPSL*RTSIFL
Trigger: TAAGAAGATGGATGTCCTCAAAAGAGAAGGAACAAA...GAGTCGGGAGGTGAGGCCTGTAGGCCAACCAATTGGTGGAGTCTCAGCGATAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp GATCTAGATCAATGTGTGAGGATGTGGGTGCAGACACACACCCACACGACAATAGTGGCTCTGTTTGGTTaGACAACCTACCCCACAGGT +
Preference number: 5 (lower is better)
Translates to: DLDQCVRMWVQTHTHTTIVALFG*TTYPTG
Trigger: ACCTGTGGGGTAGGTTGTCAAACCAAACAGAGCCAC...TATTGTCGTGTGGGTGTGTGTCTGCACCCACATCCTCACACATTGATCTAGATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp ATGTCCAGGATAAGGAGCATACACCAGGATTTATACACGGTGGCAGCGGCTATACACTTTGGAGGGACTTaGGTCACCAGGCACAAGGTT +
Preference number: 5 (lower is better)
Translates to: MSRIRSIHQDLYTVAAAIHFGGT*VTRHKV
Trigger: AACCTTGTGCCTGGTGACCAAAGTCCCTCCAAAGTG...TATAGCCGCTGCCACCGTGTATAAATCCTGGTGTATGCTCCTTATCCTGGACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp ACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTCACTTTGGAGGGACTTaGGTCACCAGGCACAAGGTT +
Preference number: 5 (lower is better)
Translates to: TFFSPPKLAQSPPSGFKSHFGGT*VTRHKV
Trigger: AACCTTGTGCCTGGTGACCAAAGTCCCTCCAAAGTG...ACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp TCTAGATCAATGTGTGAGGATGTGGGTGCAGACACACACCCACACGACAATATATCCCTCTTGCTCCCTTaGGGAAAAAGCCACGTGGAG +
Preference number: 5 (lower is better)
Translates to: SRSMCEDVGADTHPHDNISLLLP*GKSHVE
Trigger: CTCCACGTGGCTTTTTCCCAAAGGGAGCAAGAGGGA...TATATTGTCGTGTGGGTGTGTGTCTGCACCCACATCCTCACACATTGATCTAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp TTGATTTCCCCTTGCAAAGCAGTTGAGTTAGGGAGACAGAGCTTTTCCATTCCCCTGAGACTCCACCAATaGGTTGGCCTACAGGCCTCA +
Preference number: 5 (lower is better)
Translates to: LISPCKAVELGRQSFSIPLRLHQ*VGLQAS
Trigger: TGAGGCCTGTAGGCCAACCAATTGGTGGAGTCTCAG...GGGAATGGAAAAGCTCTGTCTCCCTAACTCAACTGCTTTGCAAGGGGAAATCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp TCTCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGGATTGGAAAACAAGCTaGGGACATCCCTCTACAGTA +
Preference number: 5 (lower is better)
Translates to: SLLRNWPKVLLLGSRVVRDWKTS*GHPSTV
Trigger: TACTGTAGAGGGATGTCCCAAGCTTGTTTTCCAATC...CCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp GACAGGAGCCCCAACATGAAGTTCTCAGTGCAAAGCTTTGGATTCTGGCTTGGCCTATTGGTATTCTGTTaGTTCCCATCCTCCATGCCG +
Preference number: 5 (lower is better)
Translates to: DRSPNMKFSVQSFGFWLGLLVFC*FPSSMP
Trigger: CGGCATGGAGGATGGGAACAAACAGAATACCAATAG...GCCAAGCCAGAATCCAAAGCTTTGCACTGAGAACTTCATGTTGGGGCTCCTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310858.10
CDS-3UTR CAA 90 bp CACAGGGCAGAGTCCAGGAGCCAGAACACTTCCTTGGCTTGGAAAAGGAAAAAGTGGCAACTTGACATTTaGGAGGGCCTAACTTTGGGA +
Preference number: 5 (lower is better)
Translates to: HRAESRSQNTSLAWKRKKWQLDI*EGLTLG
Trigger: TCCCAAAGTTAGGCCCTCCAAAATGTCAAGTTGCCA...CTTTTTCCTTTTCCAAGCCAAGGAAGTGTTCTGGCTCCTGGACTCTGCCCTGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310858.10
CDS TCA 90 bp GGTTTCCCTTGTTGTGTAGAACAACGACATTGTGAGGGTCTGCATTaGGCCATGTGTCCATGGCCTTACAGATGCTGCAGATCTTCTCCA +
Preference number: 5 (lower is better)
Translates to: GFPCCVEQRHCEGLH*AMCPWPYRCCRSSP
Trigger: TGGAGAAGATCTGCAGCATCTGTAAGGCCATGGACACATGGCTCAATGCAGACCCTCACAATGTCGTTGTTCTACACAACAAGGGAAACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000171887.8
ENST00000310858.10
ENST00000413554.5
ENST00000419504.5
ENST00000430930.5
ENST00000446903.5
ENST00000492338.2
ENST00000611415.4
ENST00000615025.5
ENST00000646520.1
ENST00000651849.1
ENST00000682258.1
CDS-3UTR CAA 90 bp TTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTCTCCTCCATCTTTCCCTCCATGTTTGGACTaGAGCATCTGCGCCACCTCA +
Preference number: 5 (lower is better)
Translates to: FLQFPSTQGNPSSSPPSFPPCLD*SICATS
Trigger: TGAGGTGGCGCAGATGCTCAAGTCCAAACATGGAGG...GAAAGATGGAGGAGAAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp AGCCCCAACATGAAGTTCTCAGTGCAAAGCTTTGGATTCTGGCTTGGCAACTTGCTGCCTCGGTTTCCCTaGTTGTGTAGAACAACGACA +
Preference number: 5 (lower is better)
Translates to: SPNMKFSVQSFGFWLGNLLPRFP*LCRTTT
Trigger: TGTCGTTGTTCTACACAACAAGGGAAACCGAGGCAG...CAAGTTGCCAAGCCAGAATCCAAAGCTTTGCACTGAGAACTTCATGTTGGGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310858.10
CDS-3UTR CAA 90 bp GAAATCTTTGGCAAGAATATACTGCAGTGCGGAGTGTTGTGTGTGCGTAGGTGTCATAGAACCGCTTCATaGCAAACCGGTCCAGAGCCT +
Preference number: 5 (lower is better)
Translates to: EIFGKNILQCGVLCVRRCHRTAS*QTGPEP
Trigger: AGGCTCTGGACCGGTTTGCAATGAAGCGGTTCTATG...ACACCTACGCACACACAACACTCCGCACTGCAGTATATTCTTGCCAAAGATTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp TTGGAGGCTTTGGGTTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTGGCTTGTTGTTCATTTaGATGGAGCCGGAGAGCAGG +
Preference number: 5 (lower is better)
Translates to: LEALGFCSFHLPRGIQVLGLLFI*MEPESR
Trigger: CCTGCTCTCCGGCTCCATCAAAATGAACAACAAGCC...AAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAACCCAAAGCCTCCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp AGGCTGGCAGCCACTGAAACCTCAGAACAAATTCGCTCCAGCCTCTGCTTTCTGGGAAATCGATCATCTTaGAAAGCATCATCAAGGTCC +
Preference number: 5 (lower is better)
Translates to: RLAATETSEQIRSSLCFLGNRSS*KASSRS
Trigger: GGACCTTGATGATGCTTTCAAAGATGATCGATTTCC...CAGAAAGCAGAGGCTGGAGCGAATTTGTTCTGAGGTTTCAGTGGCTGCCAGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453356.1
CDS-3UTR CAA 90 bp TGGTCAGGTGTTTTCCCAACTGTCCAGTGGACCTTAGGCCCTTTGGCCCAAGTGAATACAAACTCCACTTaGCCATACTCTGGAAATCGA +
Preference number: 5 (lower is better)
Translates to: WSGVFPTVQWTLGPLAQVNTNST*PYSGNR
Trigger: TCGATTTCCAGAGTATGGCAAAGTGGAGTTTGTATT...CACTTGGGCCAAAGGGCCTAAGGTCCACTGGACAGTTGGGAAAACACCTGACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp TCTGCAATTCACTTCCCTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATTCAGGTGCTCCATGCCTaGAATTTTCTCTGGCCCATA +
Preference number: 5 (lower is better)
Translates to: SAIHFPLPTLHFLLSSEIQVLHA*NFLWPI
Trigger: TATGGGCCAGAGAAAATTCAAGGCATGGAGCACCTG...AATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGGGAAGTGAATTGCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp TCTAGATCAATGTGTGAGGATGTGGGTGCAGACACACACCCACACGACAATATATTCCAGGGCTGGCTATaGCATTGCTATGAAGACCGG +
Preference number: 5 (lower is better)
Translates to: SRSMCEDVGADTHPHDNIFQGWL*HCYEDR
Trigger: CCGGTCTTCATAGCAATGCAATAGCCAGCCCTGGAA...TATATTGTCGTGTGGGTGTGTGTCTGCACCCACATCCTCACACATTGATCTAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp TTGATTTCCCCTTGCAAAGCAGTTGAGTTAGGGAGACAGAGCTTTTCCATTCCCTTCCAGGGCTGGCTATaGCATTGCTATGAAGACCGG +
Preference number: 5 (lower is better)
Translates to: LISPCKAVELGRQSFSIPFQGWL*HCYEDR
Trigger: CCGGTCTTCATAGCAATGCAATAGCCAGCCCTGGAA...GGGAATGGAAAAGCTCTGTCTCCCTAACTCAACTGCTTTGCAAGGGGAAATCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp TCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATCTGGAGATCTCAGGCTaGTACCAATACTTAGAAGTG +
Preference number: 5 (lower is better)
Translates to: SPPKLAQSPPSGFKSGQDLEISG*YQYLEV
Trigger: CACTTCTAAGTATTGGTACAAGCCTGAGATCTCCAG...ATCCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp AGGTGCCTTGGGTCTGAGATACTTTCAAGCAAACAAGTTCTTCCACTTGATGTCATTGCAGGCTGCCCCTaGTTTCAGCAGGTCTGCAGT +
Preference number: 5 (lower is better)
Translates to: RCLGSEILSSKQVLPLDVIAGCP*FQQVCS
Trigger: ACTGCAGACCTGCTGAAACAAGGGGCAGCCTGCAAT...GACATCAAGTGGAAGAACTTGTTTGCTTGAAAGTATCTCAGACCCAAGGCACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp TTGGGTTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTCTCCTCCATTTGACGAAGAGCACATaGCAGGCTGCCCCTTGTTTC +
Preference number: 5 (lower is better)
Translates to: LGFCSFHLPRGIQVLLLHLTKST*QAAPCF
Trigger: GAAACAAGGGGCAGCCTGCAATGTGCTCTTCGTCAA...ATGGAGGAGAAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAACCCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp ACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTTCCATGTCCACAGAGTaGACGAAGAGCACATTGCAG +
Preference number: 5 (lower is better)
Translates to: TFFSPPKLAQSPPSGFKSSMSTE*TKSTLQ
Trigger: CTGCAATGTGCTCTTCGTCAACTCTGTGGACATGGA...ACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp CCCAGCTTGATTTCCCCTTGCAAAGCAGTTGAGTTAGGGAGACAGAGCTTTTCCAAGAGCTTTCTCTGGTaGTCAGTCAGAGTGATTCCC +
Preference number: 5 (lower is better)
Translates to: PSLISPCKAVELGRQSFSKSFLW*SVRVIP
Trigger: GGGAATCACTCTGACTGACAACCAGAGAAAGCTCTT...GGAAAAGCTCTGTCTCCCTAACTCAACTGCTTTGCAAGGGGAAATCAAGCTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp CTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCATAAGAGCTTTCTCTGGTaGTCAGTCAGAGTGATTCCC +
Preference number: 5 (lower is better)
Translates to: LRNWPKVLLLGSRVVRIHKSFLW*SVRVIP
Trigger: GGGAATCACTCTGACTGACAACCAGAGAAAGCTCTT...ATGAATCCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp ACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGCATTCAGCATGACCTaGGAGACGAAGTTGACGATG +
Preference number: 5 (lower is better)
Translates to: TFFSPPKLAQSPPSGFKSAFSMT*ETKLTM
Trigger: CATCGTCAACTTCGTCTCCAAGGTCATGCTGAATGC...ACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp TCTGCAATTCACTTCCCTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATTTTCTCTCCTCCGAAATaGGCCCAAAGTCCTCCTTCT +
Preference number: 5 (lower is better)
Translates to: SAIHFPLPTLHFLLSSEIFSPPK*AQSPPS
Trigger: AGAAGGAGGACTTTGGGCCAATTTCGGAGGAGAGAA...AATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGGGAAGTGAATTGCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp CTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCATTGGACCTGGTTAGTTTaGGAGGCTTTGGGTTTTTGC +
Preference number: 5 (lower is better)
Translates to: LRNWPKVLLLGSRVVRIHWTWLV*EALGFC
Trigger: GCAAAAACCCAAAGCCTCCAAAACTAACCAGGTCCA...ATGAATCCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp TTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTCTCCTCCATCTTTCTCACCCATAGCTTGGTaGTTTGTCCCTCCCCTGCTG +
Preference number: 5 (lower is better)
Translates to: FLQFPSTQGNPSSSPPSFSPIAW*FVPPLL
Trigger: CAGCAGGGGAGGGACAAACAACCAAGCTATGGGTGA...GAAAGATGGAGGAGAAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp TCTAGATCAATGTGTGAGGATGTGGGTGCAGACACACACCCACACGACAATATACAGGTCCCCTCTCCATaGTTTTCTCGCCCAATCCTT +
Preference number: 5 (lower is better)
Translates to: SRSMCEDVGADTHPHDNIQVPSP*FSRPIL
Trigger: AAGGATTGGGCGAGAAAACAATGGAGAGGGGACCTG...TATATTGTCGTGTGGGTGTGTGTCTGCACCCACATCCTCACACATTGATCTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp GTACAGGAGTGGGGACGCGTCAGTGTACAATACATTCATGTCCAGGATAAGGAGTGGGCGACATTGAATTaGAAGTTCCATTGCCCAGCA +
Preference number: 5 (lower is better)
Translates to: VQEWGRVSVQYIHVQDKEWATLN*KFHCPA
Trigger: TGCTGGGCAATGGAACTTCAAATTCAATGTCGCCCA...CTCCTTATCCTGGACATGAATGTATTGTACACTGACGCGTCCCCACTCCTGTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp GACAGGAGCCCCAACATGAAGTTCTCAGTGCAAAGCTTTGGATTCTGGCTTGGCAGCCAGAACACTTCCTaGGCTTGGAAAAGGAAAAAG +
Preference number: 5 (lower is better)
Translates to: DRSPNMKFSVQSFGFWLGSQNTS*AWKRKK
Trigger: CTTTTTCCTTTTCCAAGCCAAGGAAGTGTTCTGGCT...GCCAAGCCAGAATCCAAAGCTTTGCACTGAGAACTTCATGTTGGGGCTCCTGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000310858.10
CDS GCA 90 bp AGAAATGGCCGACATCCTCCTTTAGACTCAAAGTTGGGGATGCCGTaGATGATCACGTGGTGCAGAAACAAGGGCTTGTTGTTCATTTTG +
Preference number: 5 (lower is better)
Translates to: RNGRHPPLDSKLGMP*MITWCRNKGLLFIL
Trigger: CAAAATGAACAACAAGCCCTTGTTTCTGCACCACGTGATCATGCACGGCATCCCCAACTTTGAGTCTAAAGGAGGATGTCGGCCATTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000171887.8
ENST00000310858.10
ENST00000413554.5
ENST00000419504.5
ENST00000430930.5
ENST00000446903.5
ENST00000611415.4
ENST00000615025.5
ENST00000646520.1
ENST00000651849.1
ENST00000682258.1
CDS GCA 90 bp AGTGTGTGTCTGGCCAGGTATATTGATCCTCCAGGCCACCTGAGATaGTTCCAATTGACTGGCTATTGGTATTCTGTTTGTTCCCATCCT +
Preference number: 5 (lower is better)
Translates to: SVCLARYIDPPGHLR*FQLTGYWYSVCSHP
Trigger: AGGATGGGAACAAACAGAATACCAATAGCCAGTCAATTGGAAGCATCTCAGGTGGCCTGGAGGATCAATATACCTGGCCAGACACACACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310858.10
CDS-3UTR CAA 90 bp GATCTAGATCAATGTGTGAGGATGTGGGTGCAGACACACACCCACACGACAATACCTCGGTTTCCCTTGTaGTGTAGAACAACGACATTG +
Preference number: 5 (lower is better)
Translates to: DLDQCVRMWVQTHTHTTIPRFPL*CRTTTL
Trigger: CAATGTCGTTGTTCTACACAACAAGGGAAACCGAGG...TATTGTCGTGTGGGTGTGTGTCTGCACCCACATCCTCACACATTGATCTAGATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp CCATTCTGGCTTAGAGTCCTTAAATGGTGGTCAGGTGTTTTCCCAACTGTCCAGCCTCGGTTTCCCTTGTaGTGTAGAACAACGACATTG +
Preference number: 5 (lower is better)
Translates to: PFWLRVLKWWSGVFPTVQPRFPL*CRTTTL
Trigger: CAATGTCGTTGTTCTACACAACAAGGGAAACCGAGG...CTGGACAGTTGGGAAAACACCTGACCACCATTTAAGGACTCTAAGCCAGAATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp TTGATTTCCCCTTGCAAAGCAGTTGAGTTAGGGAGACAGAGCTTTTCCATTCCCCTGCCTCGGTTTCCCTaGTTGTGTAGAACAACGACA +
Preference number: 5 (lower is better)
Translates to: LISPCKAVELGRQSFSIPLPRFP*LCRTTT
Trigger: TGTCGTTGTTCTACACAACAAGGGAAACCGAGGCAG...GGGAATGGAAAAGCTCTGTCTCCCTAACTCAACTGCTTTGCAAGGGGAAATCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp AGGTGCCTTGGGTCTGAGATACTTTCAAGCAAACAAGTTCTTCCACTTGATGTCCATAGAACCGCTTCATaGCAAACCGGTCCAGAGCCT +
Preference number: 5 (lower is better)
Translates to: RCLGSEILSSKQVLPLDVHRTAS*QTGPEP
Trigger: AGGCTCTGGACCGGTTTGCAATGAAGCGGTTCTATG...GACATCAAGTGGAAGAACTTGTTTGCTTGAAAGTATCTCAGACCCAAGGCACCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp GTTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTCTCCTCCATCTTTGGCTTGTTGTTCATTTaGATGGAGCCGGAGAGCAGG +
Preference number: 5 (lower is better)
Translates to: VFAVSIYPGESKFFSSIFGLLFI*MEPESR
Trigger: CCTGCTCTCCGGCTCCATCAAAATGAACAACAAGCC...AAAGATGGAGGAGAAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp TTGATTTCCCCTTGCAAAGCAGTTGAGTTAGGGAGACAGAGCTTTTCCATTCCCCCTTTAGACTCAAAGTaGGGGATGCCGTGCATGATC +
Preference number: 5 (lower is better)
Translates to: LISPCKAVELGRQSFSIPPLDSK*GMPCMI
Trigger: GATCATGCACGGCATCCCCAACTTTGAGTCTAAAGG...GGGAATGGAAAAGCTCTGTCTCCCTAACTCAACTGCTTTGCAAGGGGAAATCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp GGACAGGAGCCCCAACATGAAGTTCTCAGTGCAAAGCTTTGGATTCTGGCTTGGGGAAATCGATCATCTTaGAAAGCATCATCAAGGTCC +
Preference number: 5 (lower is better)
Translates to: GQEPQHEVLSAKLWILAWGNRSS*KASSRS
Trigger: GGACCTTGATGATGCTTTCAAAGATGATCGATTTCC...CCAAGCCAGAATCCAAAGCTTTGCACTGAGAACTTCATGTTGGGGCTCCTGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310858.10
CDS-3UTR CAA 90 bp GCAATTCACTTCCCTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCGGAAATCGATCATCTTaGAAAGCATCATCAAGGTCC +
Preference number: 5 (lower is better)
Translates to: AIHFPLPTLHFLLSSEIGGNRSS*KASSRS
Trigger: GGACCTTGATGATGCTTTCAAAGATGATCGATTTCC...GCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGGGAAGTGAATTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp CTTCCCTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCAATACAAACTCCACTTaGCCATACTCTGGAAATCGA +
Preference number: 5 (lower is better)
Translates to: LPSPHVALSSLLRNWPKVNTNST*PYSGNR
Trigger: TCGATTTCCAGAGTATGGCAAAGTGGAGTTTGTATT...GACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGGGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp TTGGAGGCTTTGGGTTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTTGTGACCATCCTGGTTaGGCAATTCATCGTCCAGGA +
Preference number: 5 (lower is better)
Translates to: LEALGFCSFHLPRGIQVLCDHPG*AIHRPG
Trigger: TCCTGGACGATGAATTGCCAAACCAGGATGGTCACA...AAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAACCCAAAGCCTCCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp TCTAGATCAATGTGTGAGGATGTGGGTGCAGACACACACCCACACGACAATATAAGCTTCCGAAAAGGATaGAGAGCGGAACATACCGCT +
Preference number: 5 (lower is better)
Translates to: SRSMCEDVGADTHPHDNISFRKG*RAEHTA
Trigger: AGCGGTATGTTCCGCTCTCAATCCTTTTCGGAAGCT...TATATTGTCGTGTGGGTGTGTGTCTGCACCCACATCCTCACACATTGATCTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp TTGATTTCCCCTTGCAAAGCAGTTGAGTTAGGGAGACAGAGCTTTTCCATTCCCAGCTTCCGAAAAGGATaGAGAGCGGAACATACCGCT +
Preference number: 5 (lower is better)
Translates to: LISPCKAVELGRQSFSIPSFRKG*RAEHTA
Trigger: AGCGGTATGTTCCGCTCTCAATCCTTTTCGGAAGCT...GGGAATGGAAAAGCTCTGTCTCCCTAACTCAACTGCTTTGCAAGGGGAAATCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp CTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCATCTGGAGATCTCAGGCTaGTACCAATACTTAGAAGTG +
Preference number: 5 (lower is better)
Translates to: LRNWPKVLLLGSRVVRIHLEISG*YQYLEV
Trigger: CACTTCTAAGTATTGGTACAAGCCTGAGATCTCCAG...ATGAATCCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp GTACAGGAGTGGGGACGCGTCAGTGTACAATACATTCATGTCCAGGATAAGGAGCTGGAGATCTCAGGCTaGTACCAATACTTAGAAGTG +
Preference number: 5 (lower is better)
Translates to: VQEWGRVSVQYIHVQDKELEISG*YQYLEV
Trigger: CACTTCTAAGTATTGGTACAAGCCTGAGATCTCCAG...CTCCTTATCCTGGACATGAATGTATTGTACACTGACGCGTCCCCACTCCTGTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp AGGTGCCTTGGGTCTGAGATACTTTCAAGCAAACAAGTTCTTCCACTTGATGTCTTGACGAAGAGCACATaGCAGGCTGCCCCTTGTTTC +
Preference number: 5 (lower is better)
Translates to: RCLGSEILSSKQVLPLDVLTKST*QAAPCF
Trigger: GAAACAAGGGGCAGCCTGCAATGTGCTCTTCGTCAA...GACATCAAGTGGAAGAACTTGTTTGCTTGAAAGTATCTCAGACCCAAGGCACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp TCTAGATCAATGTGTGAGGATGTGGGTGCAGACACACACCCACACGACAATATATCCATGTCCACAGAGTaGACGAAGAGCACATTGCAG +
Preference number: 5 (lower is better)
Translates to: SRSMCEDVGADTHPHDNISMSTE*TKSTLQ
Trigger: CTGCAATGTGCTCTTCGTCAACTCTGTGGACATGGA...TATATTGTCGTGTGGGTGTGTGTCTGCACCCACATCCTCACACATTGATCTAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp TTGGGTTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTCTCCTCCATTCCATGTCCACAGAGTaGACGAAGAGCACATTGCAG +
Preference number: 5 (lower is better)
Translates to: LGFCSFHLPRGIQVLLLHSMSTE*TKSTLQ
Trigger: CTGCAATGTGCTCTTCGTCAACTCTGTGGACATGGA...ATGGAGGAGAAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAACCCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp ATTTACAAAGGAAGGGGATGGGAAATATCTCCTATCTTGGAAGATAATTGGGGTACCTTGGAGACGAAGTaGACGATGGCAGAGGCCGGC +
Preference number: 5 (lower is better)
Translates to: IYKGRGWEISPILEDNWGTLETK*TMAEAG
Trigger: GCCGGCCTCTGCCATCGTCAACTTCGTCTCCAAGGT...ACCCCAATTATCTTCCAAGATAGGAGATATTTCCCATCCCCTTCCTTTGTAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp TTGGGTTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTCTCCTCCATGCATTCAGCATGACCTaGGAGACGAAGTTGACGATG +
Preference number: 5 (lower is better)
Translates to: LGFCSFHLPRGIQVLLLHAFSMT*ETKLTM
Trigger: CATCGTCAACTTCGTCTCCAAGGTCATGCTGAATGC...ATGGAGGAGAAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAACCCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp GTTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTCTCCTCCATCTTTCAGGGTTCATCTCTTTaGGCCGGCATTCAGCATGAC +
Preference number: 5 (lower is better)
Translates to: VFAVSIYPGESKFFSSIFQGSSL*AGIQHD
Trigger: GTCATGCTGAATGCCGGCCAAAAGAGATGAACCCTG...AAAGATGGAGGAGAAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp TTGGGTTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTCTCCTCCATTTCTCTCCTCCGAAATaGGCCCAAAGTCCTCCTTCT +
Preference number: 5 (lower is better)
Translates to: LGFCSFHLPRGIQVLLLHFSPPK*AQSPPS
Trigger: AGAAGGAGGACTTTGGGCCAATTTCGGAGGAGAGAA...ATGGAGGAGAAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAACCCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp GAAATCTTTGGCAAGAATATACTGCAGTGCGGAGTGTTGTGTGTGCGTAGGTGTGGAGGCTTTGGGTTTTaGCAGTTTCCATCTACCCAG +
Preference number: 5 (lower is better)
Translates to: EIFGKNILQCGVLCVRRCGGFGF*QFPSTQ
Trigger: CTGGGTAGATGGAAACTGCAAAAACCCAAAGCCTCC...ACACCTACGCACACACAACACTCCGCACTGCAGTATATTCTTGCCAAAGATTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp TTGATTTCCCCTTGCAAAGCAGTTGAGTTAGGGAGACAGAGCTTTTCCATTCCCGGAGGCTTTGGGTTTTaGCAGTTTCCATCTACCCAG +
Preference number: 5 (lower is better)
Translates to: LISPCKAVELGRQSFSIPGGFGF*QFPSTQ
Trigger: CTGGGTAGATGGAAACTGCAAAAACCCAAAGCCTCC...GGGAATGGAAAAGCTCTGTCTCCCTAACTCAACTGCTTTGCAAGGGGAAATCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp AGGTGCCTTGGGTCTGAGATACTTTCAAGCAAACAAGTTCTTCCACTTGATGTCTCTGTCACCCATAGCTaGGTTGTTTGTCCCTCCCCT +
Preference number: 5 (lower is better)
Translates to: RCLGSEILSSKQVLPLDVSVTHS*VVCPSP
Trigger: AGGGGAGGGACAAACAACCAAGCTATGGGTGACAGA...GACATCAAGTGGAAGAACTTGTTTGCTTGAAAGTATCTCAGACCCAAGGCACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp GTTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTCTCCTCCATCTTTTCTGTCACCCATAGCTaGGTTGTTTGTCCCTCCCCT +
Preference number: 5 (lower is better)
Translates to: VFAVSIYPGESKFFSSIFSVTHS*VVCPSP
Trigger: AGGGGAGGGACAAACAACCAAGCTATGGGTGACAGA...AAAGATGGAGGAGAAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp GTTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTCTCCTCCATCTTTAGCAACTTGCCTTTCTaGCTGCTGAGCCACATGCCT +
Preference number: 5 (lower is better)
Translates to: VFAVSIYPGESKFFSSIFSNLPF*LLSHMP
Trigger: AGGCATGTGGCTCAGCAGCAAGAAAGGCAAGTTGCT...AAAGATGGAGGAGAAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000446688.5
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp TCTCCTGGCCAGTCTCAGAAGACCCAGGGATCCTCAAAAACCAGGGGAGAAGGAGAAATATCTCCTATCTaGGAAGATAATTGGGGTTTG +
Preference number: 5 (lower is better)
Translates to: SPGQSQKTQGSSKTRGEGEISPI*EDNWGL
Trigger: CAAACCCCAATTATCTTCCAAGATAGGAGATATTTC...TCCTTCTCCCCTGGTTTTTGAGGATCCCTGGGTCTTCTGAGACTGGCCAGGAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp AGCCCCAACATGAAGTTCTCAGTGCAAAGCTTTGGATTCTGGCTTGGCAACTTGTTCAGCCAACTCTTTTaGCCTTGGTCCTCATTGCAG +
Preference number: 5 (lower is better)
Translates to: SPNMKFSVQSFGFWLGNLFSQLF*PWSSLQ
Trigger: CTGCAATGAGGACCAAGGCAAAAAGAGTTGGCTGAA...CAAGTTGCCAAGCCAGAATCCAAAGCTTTGCACTGAGAACTTCATGTTGGGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310858.10
CDS-3UTR CAA 90 bp GTTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTCTCCTCCATCTTTTTGAAGGTCTTCACCTaGAAGCGGTGTGTCTTGGGG +
Preference number: 5 (lower is better)
Translates to: VFAVSIYPGESKFFSSIFLKVFT*KRCVLG
Trigger: CCCCAAGACACACCGCTTCAAGGTGAAGACCTTCAA...AAAGATGGAGGAGAAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000646520.1
CDS TCA 90 bp GTTTCCTGCCTGGGCTATTGTGAGACTCCAATGAGACCATGTGGTTaGAAGCTCTCAGTAAAACTGTCTAAACTCTCCCAACAGAAGGTG +
Preference number: 5 (lower is better)
Translates to: VSCLGYCETPMRPCG*KLSVKLSKLSQQKV
Trigger: CACCTTCTGTTGGGAGAGTTTAGACAGTTTTACTGAGAGCTTTCAACCACATGGTCTCATTGGAGTCTCACAATAGCCCAGGCAGGAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492338.2
CDS-3UTR CAA 90 bp AGGTGCCTTGGGTCTGAGATACTTTCAAGCAAACAAGTTCTTCCACTTGATGTCCCTTTAGACTCAAAGTaGGGGATGCCGTGCATGATC +
Preference number: 5 (lower is better)
Translates to: RCLGSEILSSKQVLPLDVPLDSK*GMPCMI
Trigger: GATCATGCACGGCATCCCCAACTTTGAGTCTAAAGG...GACATCAAGTGGAAGAACTTGTTTGCTTGAAAGTATCTCAGACCCAAGGCACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp CCCAGCTTGATTTCCCCTTGCAAAGCAGTTGAGTTAGGGAGACAGAGCTTTTCCGGAAATCGATCATCTTaGAAAGCATCATCAAGGTCC +
Preference number: 5 (lower is better)
Translates to: PSLISPCKAVELGRQSFSGNRSS*KASSRS
Trigger: GGACCTTGATGATGCTTTCAAAGATGATCGATTTCC...GGAAAAGCTCTGTCTCCCTAACTCAACTGCTTTGCAAGGGGAAATCAAGCTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp GGACAGGAGCCCCAACATGAAGTTCTCAGTGCAAAGCTTTGGATTCTGGCTTGGAATACAAACTCCACTTaGCCATACTCTGGAAATCGA +
Preference number: 5 (lower is better)
Translates to: GQEPQHEVLSAKLWILAWNTNST*PYSGNR
Trigger: TCGATTTCCAGAGTATGGCAAAGTGGAGTTTGTATT...CCAAGCCAGAATCCAAAGCTTTGCACTGAGAACTTCATGTTGGGGCTCCTGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310858.10
CDS-3UTR CAA 90 bp TCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATAATACAAACTCCACTTaGCCATACTCTGGAAATCGA +
Preference number: 5 (lower is better)
Translates to: SPPKLAQSPPSGFKSGQDNTNST*PYSGNR
Trigger: TCGATTTCCAGAGTATGGCAAAGTGGAGTTTGTATT...ATCCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp AGGTGCCTTGGGTCTGAGATACTTTCAAGCAAACAAGTTCTTCCACTTGATGTCTGTGACCATCCTGGTTaGGCAATTCATCGTCCAGGA +
Preference number: 5 (lower is better)
Translates to: RCLGSEILSSKQVLPLDVCDHPG*AIHRPG
Trigger: TCCTGGACGATGAATTGCCAAACCAGGATGGTCACA...GACATCAAGTGGAAGAACTTGTTTGCTTGAAAGTATCTCAGACCCAAGGCACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp TTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTCTCCTCCATCTTTCAGCTTCCGAAAAGGATaGAGAGCGGAACATACCGCT +
Preference number: 5 (lower is better)
Translates to: FLQFPSTQGNPSSSPPSFSFRKG*RAEHTA
Trigger: AGCGGTATGTTCCGCTCTCAATCCTTTTCGGAAGCT...GAAAGATGGAGGAGAAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp ACTTTCTTCTCTCCTCCGAAATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTTCCAGCATCAGCATATaGAGTGTTTCGATGGACTGT +
Preference number: 5 (lower is better)
Translates to: TFFSPPKLAQSPPSGFKSSSISI*SVSMDC
Trigger: ACAGTCCATCGAAACACTCAATATGCTGATGCTGGA...ACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATTTCGGAGGAGAGAAGAAAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp TCTGCAATTCACTTCCCTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATTTCCAGCATCAGCATATaGAGTGTTTCGATGGACTGT +
Preference number: 5 (lower is better)
Translates to: SAIHFPLPTLHFLLSSEISSISI*SVSMDC
Trigger: ACAGTCCATCGAAACACTCAATATGCTGATGCTGGA...AATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGGGAAGTGAATTGCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp GAAATCTTTGGCAAGAATATACTGCAGTGCGGAGTGTTGTGTGTGCGTAGGTGTTGGACCTGGTTAGTTTaGGAGGCTTTGGGTTTTTGC +
Preference number: 5 (lower is better)
Translates to: EIFGKNILQCGVLCVRRCWTWLV*EALGFC
Trigger: GCAAAAACCCAAAGCCTCCAAAACTAACCAGGTCCA...ACACCTACGCACACACAACACTCCGCACTGCAGTATATTCTTGCCAAAGATTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp AGCCCCAACATGAAGTTCTCAGTGCAAAGCTTTGGATTCTGGCTTGGCAACTTGAACACAATCCTTCCTTaGCTGAAAGGGCACCATGAA +
Preference number: 5 (lower is better)
Translates to: SPNMKFSVQSFGFWLGNLNTILP*LKGHHE
Trigger: TTCATGGTGCCCTTTCAGCAAAGGAAGGATTGTGTT...CAAGTTGCCAAGCCAGAATCCAAAGCTTTGCACTGAGAACTTCATGTTGGGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310858.10
CDS CCA 90 bp GAGCTTAAAAGTAGACGATGGGTTGACAGGTGCAGCAAACCACCATaGCACATATATGCCTATGTAACAAATCTGCACATTCAGCACGTG +
Preference number: 5 (lower is better)
Translates to: ELKSRRWVDRCSKPP*HIYAYVTNLHIQHV
Trigger: CACGTGCTGAATGTGCAGATTTGTTACATAGGCATATATGTGCCATGGTGGTTTGCTGCACCTGTCAACCCATCGTCTACTTTTAAGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479185.1
CDS-3UTR CAA 90 bp GTTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTCTCCTCCATCTTTCCTCGGTTTCCCTTGTaGTGTAGAACAACGACATTG +
Preference number: 5 (lower is better)
Translates to: VFAVSIYPGESKFFSSIFPRFPL*CRTTTL
Trigger: CAATGTCGTTGTTCTACACAACAAGGGAAACCGAGG...AAAGATGGAGGAGAAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp TCTGCAATTCACTTCCCTCTCCCCACGTTGCACTTTCTTCTCTCCTCCGAAATTGGAAATCGATCATCTTaGAAAGCATCATCAAGGTCC +
Preference number: 5 (lower is better)
Translates to: SAIHFPLPTLHFLLSSEIGNRSS*KASSRS
Trigger: GGACCTTGATGATGCTTTCAAAGATGATCGATTTCC...AATTTCGGAGGAGAGAAGAAAGTGCAACGTGGGGAGAGGGAAGTGAATTGCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp CCCAGCTTGATTTCCCCTTGCAAAGCAGTTGAGTTAGGGAGACAGAGCTTTTCCAATACAAACTCCACTTaGCCATACTCTGGAAATCGA +
Preference number: 5 (lower is better)
Translates to: PSLISPCKAVELGRQSFSNTNST*PYSGNR
Trigger: TCGATTTCCAGAGTATGGCAAAGTGGAGTTTGTATT...GGAAAAGCTCTGTCTCCCTAACTCAACTGCTTTGCAAGGGGAAATCAAGCTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp CAGCACAACGACCAATTAGGCTGGCAGCCACTGAAACCTCAGAACAAATTCGCTAATACAAACTCCACTTaGCCATACTCTGGAAATCGA +
Preference number: 5 (lower is better)
Translates to: QHNDQLGWQPLKPQNKFANTNST*PYSGNR
Trigger: TCGATTTCCAGAGTATGGCAAAGTGGAGTTTGTATT...AGCGAATTTGTTCTGAGGTTTCAGTGGCTGCCAGCCTAATTGGTCGTTGTGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453356.1
CDS-3UTR CAA 90 bp TCTAGATCAATGTGTGAGGATGTGGGTGCAGACACACACCCACACGACAATATATCCAGCATCAGCATATaGAGTGTTTCGATGGACTGT +
Preference number: 5 (lower is better)
Translates to: SRSMCEDVGADTHPHDNISSISI*SVSMDC
Trigger: ACAGTCCATCGAAACACTCAATATGCTGATGCTGGA...TATATTGTCGTGTGGGTGTGTGTCTGCACCCACATCCTCACACATTGATCTAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000171887.8
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp GTTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTCTCCTCCATCTTTAAGAGCTTTCTCTGGTaGTCAGTCAGAGTGATTCCC +
Preference number: 5 (lower is better)
Translates to: VFAVSIYPGESKFFSSIFKSFLW*SVRVIP
Trigger: GGGAATCACTCTGACTGACAACCAGAGAAAGCTCTT...AAAGATGGAGGAGAAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp GTTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTCTCCTCCATCTTTTGGACCTGGTTAGTTTaGGAGGCTTTGGGTTTTTGC +
Preference number: 5 (lower is better)
Translates to: VFAVSIYPGESKFFSSIFWTWLV*EALGFC
Trigger: GCAAAAACCCAAAGCCTCCAAAACTAACCAGGTCCA...AAAGATGGAGGAGAAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp AATTGGCCCAAAGTCCTCCTTCTGGGTTCAAGAGTGGTCAGGATTCATGGGTCCTTTGTTCCTTCTCTTTaGAGGACATCCATCTTCTTA +
Preference number: 5 (lower is better)
Translates to: NWPKVLLLGSRVVRIHGSFVPSL*RTSIFL
Trigger: TAAGAAGATGGATGTCCTCAAAAGAGAAGGAACAAA...GGACCCATGAATCCTGACCACTCTTGAACCCAGAAGGAGGACTTTGGGCCAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp AGGTGCCTTGGGTCTGAGATACTTTCAAGCAAACAAGTTCTTCCACTTGATGTCTCCCCATCATTCGCCTaGAAAAGTCACACTCTCAGA +
Preference number: 5 (lower is better)
Translates to: RCLGSEILSSKQVLPLDVSPSFA*KSHTLR
Trigger: TCTGAGAGTGTGACTTTTCAAGGCGAATGATGGGGA...GACATCAAGTGGAAGAACTTGTTTGCTTGAAAGTATCTCAGACCCAAGGCACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp AGGTGCCTTGGGTCTGAGATACTTTCAAGCAAACAAGTTCTTCCACTTGATGTCTGGGCGACATTGAATTaGAAGTTCCATTGCCCAGCA +
Preference number: 5 (lower is better)
Translates to: RCLGSEILSSKQVLPLDVWATLN*KFHCPA
Trigger: TGCTGGGCAATGGAACTTCAAATTCAATGTCGCCCA...GACATCAAGTGGAAGAACTTGTTTGCTTGAAAGTATCTCAGACCCAAGGCACCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp AGCCCCAACATGAAGTTCTCAGTGCAAAGCTTTGGATTCTGGCTTGGCAACTTGCCAATTGACTGGCTATaGGTATTCTGTTTGTTCCCA +
Preference number: 5 (lower is better)
Translates to: SPNMKFSVQSFGFWLGNLPIDWL*VFCLFP
Trigger: TGGGAACAAACAGAATACCAATAGCCAGTCAATTGG...CAAGTTGCCAAGCCAGAATCCAAAGCTTTGCACTGAGAACTTCATGTTGGGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310858.10
CDS CCA 90 bp CATTGGGACAAATACCTAATGCATGCAGAGCTTAAAAGTAGACGATaGGTTGACAGGTGCAGCAAACCACCATGGCACATATATGCCTAT +
Preference number: 5 (lower is better)
Translates to: HWDKYLMHAELKSRR*VDRCSKPPWHIYAY
Trigger: ATAGGCATATATGTGCCATGGTGGTTTGCTGCACCTGTCAACCCATCGTCTACTTTTAAGCTCTGCATGCATTAGGTATTTGTCCCAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479185.1
CDS-3UTR CAA 90 bp ATTTACAAAGGAAGGGGATGGGAAATATCTCCTATCTTGGAAGATAATTGGGGTCATAGAACCGCTTCATaGCAAACCGGTCCAGAGCCT +
Preference number: 5 (lower is better)
Translates to: IYKGRGWEISPILEDNWGHRTAS*QTGPEP
Trigger: AGGCTCTGGACCGGTTTGCAATGAAGCGGTTCTATG...ACCCCAATTATCTTCCAAGATAGGAGATATTTCCCATCCCCTTCCTTTGTAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp TTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTCTCCTCCATCTTTCGATTGGAAAACAAGCTaGGGACATCCCTCTACAGTA +
Preference number: 5 (lower is better)
Translates to: FLQFPSTQGNPSSSPPSFDWKTS*GHPSTV
Trigger: TACTGTAGAGGGATGTCCCAAGCTTGTTTTCCAATC...GAAAGATGGAGGAGAAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp ATGTCCAGGATAAGGAGCATACACCAGGATTTATACACGGTGGCAGCGGCTATAAGGGATTTCTTACATTaGTTCTCAATGATGGGTCTG +
Preference number: 5 (lower is better)
Translates to: MSRIRSIHQDLYTVAAAIRDFLH*FSMMGL
Trigger: CAGACCCATCATTGAGAACAAATGTAAGAAATCCCT...TATAGCCGCTGCCACCGTGTATAAATCCTGGTGTATGCTCCTTATCCTGGACAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS-3UTR CAA 90 bp TTGGGTTTTTGCAGTTTCCATCTACCCAGGGGAATCCAAGTTCTTCTCCTCCATAATACAAACTCCACTTaGCCATACTCTGGAAATCGA +
Preference number: 5 (lower is better)
Translates to: LGFCSFHLPRGIQVLLLHNTNST*PYSGNR
Trigger: TCGATTTCCAGAGTATGGCAAAGTGGAGTTTGTATT...ATGGAGGAGAAGAACTTGGATTCCCCTGGGTAGATGGAAACTGCAAAAACCCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS CCA 90 bp TGTTATGGGTTAAATTGTGTTCACCCAAAACATACATCAAAGTCCTaGCCCCCAGTGCTTGTGAATTTGACCTTATTTGGAAATAGGGTC +
Preference number: 5 (lower is better)
Translates to: CYGLNCVHPKHTSKS*PPVLVNLTLFGNRV
Trigger: GACCCTATTTCCAAATAAGGTCAAATTCACAAGCACTGGGGGCCAGGACTTTGATGTATGTTTTGGGTGAACACAATTTAACCCATAACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495556.1
CDS-3UTR CAA 90 bp AGGTGCCTTGGGTCTGAGATACTTTCAAGCAAACAAGTTCTTCCACTTGATGTCTTTGTTCCTTCTCTTTaGAGGACATCCATCTTCTTA +
Preference number: 5 (lower is better)
Translates to: RCLGSEILSSKQVLPLDVFVPSL*RTSIFL
Trigger: TAAGAAGATGGATGTCCTCAAAAGAGAAGGAACAAA...GACATCAAGTGGAAGAACTTGTTTGCTTGAAAGTATCTCAGACCCAAGGCACCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000646520.1
ENST00000651849.1
CDS TCA 90 bp ACCAGTATAGAGGCTTCAAGGTTATTATTAAACCAGCCTTCAGGTTaGATCACCTCAGTTCTCATAAATACACATCTTCTATCCAGCACC +
Preference number: 5 (lower is better)
Translates to: TSIEASRLLLNQPSG*ITSVLINTHLLSST
Trigger: GGTGCTGGATAGAAGATGTGTATTTATGAGAACTGAGGTGATTCAACCTGAAGGCTGGTTTAATAATAACCTTGAAGCCTCTATACTGGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479185.1
CDS-3UTR CAA 90 bp ATTTACAAAGGAAGGGGATGGGAAATATCTCCTATCTTGGAAGATAATTGGGGTAGGGATTTCTTACATTaGTTCTCAATGATGGGTCTG +
Preference number: 5 (lower is better)
Translates to: IYKGRGWEISPILEDNWGRDFLH*FSMMGL
Trigger: CAGACCCATCATTGAGAACAAATGTAAGAAATCCCT...ACCCCAATTATCTTCCAAGATAGGAGATATTTCCCATCCCCTTCCTTTGTAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000646520.1
ENST00000651849.1
CDS CCA 90 bp AGTGAGAGAATGAATTCTAACTCGGCTTATACCTTGAATTTTCTCTaGCCCATAAGAAAATACAAACTCCACTTTGCCATACTCTGGAAA +
Preference number: 5 (lower is better)
Translates to: SERMNSNSAYTLNFL*PIRKYKLHFAILWK
Trigger: TTTCCAGAGTATGGCAAAGTGGAGTTTGTATTTTCTTATGGGCCAGAGAAAATTCAAGGTATAAGCCGAGTTAGAATTCATTCTCTCACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479185.1
CDS CCA 72 bp GGTGGACCCGCCGCTCCTGGCGCAGAGTTCCGGGGTTaGGGCGGGGTAGGAAGGCGGGCGCCCTGCCCTACC +
Preference number: 6 (lower is better)
Translates to: GGPAAPGAEFRG*GGVGRRAPCPT
Trigger: GGTAGGGCAGGGCGCCCGCCTTCCTACCCCGCCCCAACCCCGGAACTCTGCGCCAGGAGCGGCGGGTCCACC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646520.1
CDS CCA 72 bp TCAGCCCGCGCCGAGACCCAGGGACTCCCCGGGGGCTaGGGACCGCAGAGTGGTCCGGGCCGCAGCTCTTCG +
Preference number: 6 (lower is better)
Translates to: SARAETQGLPGG*GPQSGPGRSSS
Trigger: CGAAGAGCTGCGGCCCGGACCACTCTGCGGTCCCCAGCCCCCGGGGAGTCCCTGGGTCTCGGCGCGGGCTGA
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649572.1
CDS CCA 72 bp CTCAGCCGAGTCATGCTGACCCCGAGAGTGGGCGCCTaGGGCGCGAGGGTCGGAAGAGGTGGACCCGCCGCT +
Preference number: 6 (lower is better)
Translates to: LSRVMLTPRVGA*GARVGRGGPAA
Trigger: AGCGGCGGGTCCACCTCTTCCGACCCTCGCGCCCCAGGCGCCCACTCTCGGGGTCAGCATGACTCGGCTGAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646520.1
CDS CCA 72 bp GTGGCGTCCAGAGGAGGGCACAGCCGAGCCCCCTGCTaGGCGGGACCTGAGGTGCTGGGTGTGGTACATGGC +
Preference number: 6 (lower is better)
Translates to: VASRGGHSRAPC*AGPEVLGVVHG
Trigger: GCCATGTACCACACCCAGCACCTCAGGTCCCGCCCAGCAGGGGGCTCGGCTGTGCCCTCCTCTGGACGCCAC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446903.5
ENST00000479185.1
ENST00000480665.1
ENST00000611415.4
ENST00000615025.5
ENST00000646520.1
ENST00000651849.1
ENST00000682258.1
CDS TCA 72 bp TGCTGGGTCCCGTCACTGAGGCACGCCCAGGGCCTGTaGAGAGCCCCTGAAGCTAGAGTCCCCGCGGCGCTG +
Preference number: 6 (lower is better)
Translates to: CWVPSLRHAQGL*RAPEARVPAAL
Trigger: CAGCGCCGCGGGGACTCTAGCTTCAGGGGCTCTTCACAGGCCCTGGGCGTGCCTCAGTGACGGGACCCAGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000446903.5
ENST00000682258.1
CDS GCA 72 bp GGCACAGCCGAGCCCCCTGCTGGGCGGGACCTGAGGTaGTGGGTGTGGTACATGGCGCCTTGCTTCTCTCGC +
Preference number: 6 (lower is better)
Translates to: GTAEPPAGRDLR*WVWYMAPCFSR
Trigger: GCGAGAGAAGCAAGGCGCCATGTACCACACCCAGCACCTCAGGTCCCGCCCAGCAGGGGGCTCGGCTGTGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446903.5
ENST00000479185.1
ENST00000480665.1
ENST00000611415.4
ENST00000615025.5
ENST00000646520.1
ENST00000651849.1
ENST00000682258.1
CDS CAA 90 bp CTGCTGCTGCTGCTGCTGCTGCTGCTGCCACGAATTCAGTCCCCTTaGCACAGCCTCCCGGCTGCTTCCCCCTCGGACCGGAGCTGGGGG +
Preference number: 6 (lower is better)
Translates to: LLLLLLLLLPRIQSP*HSLPAASPSDRSWG
Trigger: CCCCCAGCTCCGGTCCGAGGGGGAAGCAGCCGGGAGGCTGTGCAAAGGGGACTGAATTCGTGGCAGCAGCAGCAGCAGCAGCAGCAGCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000615025.5
ENST00000646520.1
ENST00000651849.1
ENST00000682258.1
CDS TCA 72 bp AGGAGGGCACAGCCGAGCCCCCTGCTGGGCGGGACCTaGGGTGCTGGGTGTGGTACATGGCGCCTTGCTTCT +
Preference number: 6 (lower is better)
Translates to: RRAQPSPLLGGT*GAGCGTWRLAS
Trigger: AGAAGCAAGGCGCCATGTACCACACCCAGCACCTCAGGTCCCGCCCAGCAGGGGGCTCGGCTGTGCCCTCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446903.5
ENST00000479185.1
ENST00000480665.1
ENST00000611415.4
ENST00000615025.5
ENST00000646520.1
ENST00000651849.1
ENST00000682258.1
CDS CCA 72 bp TGTGAAGAGCCCCTGAAGCTAGAGTCCCCGCGGCGCTaGCAGAAGGGCTCTCTGAGTCCGCGGCTGCTCCGG +
Preference number: 6 (lower is better)
Translates to: CEEPLKLESPRR*QKGSLSPRLLR
Trigger: CCGGAGCAGCCGCGGACTCAGAGAGCCCTTCTGCCAGCGCCGCGGGGACTCTAGCTTCAGGGGCTCTTCACA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000446903.5
ENST00000682258.1
CDS CAA 72 bp GAGGCCCCGGGGACAGGCTCGTCGGTCTTGTCGGTCTaGGTGGAGGCTGTGGAGTTGCCCGAGTCGCTGCTC +
Preference number: 6 (lower is better)
Translates to: EAPGTGSSVLSV*VEAVELPESLL
Trigger: GAGCAGCGACTCGGGCAACTCCACAGCCTCCACCAAGACCGACAAGACCGACGAGCCTGTCCCCGGGGCCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446903.5
ENST00000479185.1
ENST00000480665.1
ENST00000611415.4
ENST00000615025.5
ENST00000646520.1
ENST00000651849.1
ENST00000682258.1
CDS CAA 72 bp GTGGCACTGGAGGCCCCGGGGACAGGCTCGTCGGTCTaGTCGGTCTTGGTGGAGGCTGTGGAGTTGCCCGAG +
Preference number: 6 (lower is better)
Translates to: VALEAPGTGSSV*SVLVEAVELPE
Trigger: CTCGGGCAACTCCACAGCCTCCACCAAGACCGACAAGACCGACGAGCCTGTCCCCGGGGCCTCCAGTGCCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446903.5
ENST00000479185.1
ENST00000480665.1
ENST00000611415.4
ENST00000615025.5
ENST00000646520.1
ENST00000651849.1
ENST00000682258.1
CDS CAA 90 bp AAGGCAGCAGTGGCACTGGAGGCCCCGGGGACAGGCTCGTCGGTCTaGTCGGTCTTGGTGGAGGCTGTGGAGTTGCCCGAGTCGCTGCTC +
Preference number: 6 (lower is better)
Translates to: KAAVALEAPGTGSSV*SVLVEAVELPESLL
Trigger: GAGCAGCGACTCGGGCAACTCCACAGCCTCCACCAAGACCGACAAGACCGACGAGCCTGTCCCCGGGGCCTCCAGTGCCACTGCTGCCTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446903.5
ENST00000479185.1
ENST00000480665.1
ENST00000611415.4
ENST00000615025.5
ENST00000646520.1
ENST00000651849.1
ENST00000682258.1
CDS GCA 72 bp GGTGGGCGAGGCTGCTGCTGCTGCTGCTGCTGCTGCTaGCACGAATTCAGTCCCCTTTGCACAGCCTCCCGG +
Preference number: 6 (lower is better)
Translates to: GGRGCCCCCCCC*HEFSPLCTASR
Trigger: CCGGGAGGCTGTGCAAAGGGGACTGAATTCGTGGCAGCAGCAGCAGCAGCAGCAGCAGCAGCCTCGCCCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000615025.5
ENST00000646520.1
ENST00000651849.1
ENST00000682258.1
CDS GCA 72 bp ACAGAGGCTGGGTGGGCGTCCGGGGACCCTGGTCACTaGTCTCTCCCGACGGGAAACTCCCCACTGAAGTGC +
Preference number: 6 (lower is better)
Translates to: TEAGWASGDPGH*SLPTGNSPLKC
Trigger: GCACTTCAGTGGGGAGTTTCCCGTCGGGAGAGAGCAGTGACCAGGGTCCCCGGACGCCCACCCAGCCTCTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000615025.5
ENST00000646520.1
ENST00000651849.1
ENST00000682258.1
CDS GCA 72 bp AGGAGGGCGTGGAAGGAGCCTGGTAGCCAGAGGCACTaGTCTGCCGGGACAGTGTGGGTCTCCGATCCTCCG +
Preference number: 6 (lower is better)
Translates to: RRAWKEPGSQRH*SAGTVWVSDPP
Trigger: CGGAGGATCGGAGACCCACACTGTCCCGGCAGAGCAGTGCCTCTGGCTACCAGGCTCCTTCCACGCCCTCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000615025.5
ENST00000646520.1
ENST00000651849.1
ENST00000682258.1
CDS GCA 72 bp TCCACCTGGAGAGGCCCCATGCGGTCCATGGGATGCTaGCGCTTTGTAGGGCTGGACATGCAGGGCTGCCCC +
Preference number: 6 (lower is better)
Translates to: STWRGPMRSMGC*RFVGLDMQGCP
Trigger: GGGGCAGCCCTGCATGTCCAGCCCTACAAAGCGGCAGCATCCCATGGACCGCATGGGGCCTCTCCAGGTGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413554.5
CDS CCA 72 bp CCCCGGGGACAGGCTCGTCGGTCTTGTCGGTCTTGGTaGAGGCTGTGGAGTTGCCCGAGTCGCTGCTCACAG +
Preference number: 6 (lower is better)
Translates to: PRGQARRSCRSW*RLWSCPSRCSQ
Trigger: CTGTGAGCAGCGACTCGGGCAACTCCACAGCCTCCACCAAGACCGACAAGACCGACGAGCCTGTCCCCGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446903.5
ENST00000479185.1
ENST00000480665.1
ENST00000611415.4
ENST00000615025.5
ENST00000646520.1
ENST00000651849.1
ENST00000682258.1
CDS CCA 72 bp AGGCCCCGGGGACAGGCTCGTCGGTCTTGTCGGTCTTaGTGGAGGCTGTGGAGTTGCCCGAGTCGCTGCTCA +
Preference number: 6 (lower is better)
Translates to: RPRGQARRSCRS*WRLWSCPSRCS
Trigger: TGAGCAGCGACTCGGGCAACTCCACAGCCTCCACCAAGACCGACAAGACCGACGAGCCTGTCCCCGGGGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446903.5
ENST00000479185.1
ENST00000480665.1
ENST00000611415.4
ENST00000615025.5
ENST00000646520.1
ENST00000651849.1
ENST00000682258.1
CDS CCA 72 bp ACAGCCGAGCCCCCTGCTGGGCGGGACCTGAGGTGCTaGGTGTGGTACATGGCGCCTTGCTTCTCTCGCTCT +
Preference number: 6 (lower is better)
Translates to: TAEPPAGRDLRC*VWYMAPCFSRS
Trigger: AGAGCGAGAGAAGCAAGGCGCCATGTACCACACCCAGCACCTCAGGTCCCGCCCAGCAGGGGGCTCGGCTGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446903.5
ENST00000479185.1
ENST00000480665.1
ENST00000611415.4
ENST00000615025.5
ENST00000646520.1
ENST00000651849.1
ENST00000682258.1
CDS CCA 72 bp GACTCCAACAGAGGCTGGGTGGGCGTCCGGGGACCCTaGTCACTGCTCTCTCCCGACGGGAAACTCCCCACT +
Preference number: 6 (lower is better)
Translates to: DSNRGWVGVRGP*SLLSPDGKLPT
Trigger: AGTGGGGAGTTTCCCGTCGGGAGAGAGCAGTGACCAGGGTCCCCGGACGCCCACCCAGCCTCTGTTGGAGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000615025.5
ENST00000646520.1
ENST00000651849.1
ENST00000682258.1
CDS CAA 72 bp CTGCTGCTGCTGCTGCTGCCACGAATTCAGTCCCCTTaGCACAGCCTCCCGGCTGCTTCCCCCTCGGACCGG +
Preference number: 6 (lower is better)
Translates to: LLLLLLPRIQSP*HSLPAASPSDR
Trigger: CCGGTCCGAGGGGGAAGCAGCCGGGAGGCTGTGCAAAGGGGACTGAATTCGTGGCAGCAGCAGCAGCAGCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000615025.5
ENST00000646520.1
ENST00000651849.1
ENST00000682258.1
CDS CAA 90 bp GTGGCACTGGAGGCCCCGGGGACAGGCTCGTCGGTCTTGTCGGTCTaGGTGGAGGCTGTGGAGTTGCCCGAGTCGCTGCTCACAGAAAGC +
Preference number: 6 (lower is better)
Translates to: VALEAPGTGSSVLSV*VEAVELPESLLTES
Trigger: GCTTTCTGTGAGCAGCGACTCGGGCAACTCCACAGCCTCCACCAAGACCGACAAGACCGACGAGCCTGTCCCCGGGGCCTCCAGTGCCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446903.5
ENST00000479185.1
ENST00000480665.1
ENST00000611415.4
ENST00000615025.5
ENST00000646520.1
ENST00000651849.1
ENST00000682258.1
CDS CAA 90 bp CCCGGTCTCCCACTGACATCCTTCGCTTCTCTGGCAAGGCTGGTGTaGGGCTCCCTTGCCGGAAGGCTGCGGAGTCTGGTGACGGGGAGG +
Preference number: 6 (lower is better)
Translates to: PGLPLTSFASLARLV*GSLAGRLRSLVTGR
Trigger: CCTCCCCGTCACCAGACTCCGCAGCCTTCCGGCAAGGGAGCCCAACACCAGCCTTGCCAGAGAAGCGAAGGATGTCAGTGGGAGACCGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000615025.5
ENST00000646520.1
ENST00000651849.1
ENST00000682258.1
CDS GCA 72 bp TGCTGCTGCTGCTGCTGCCACGAATTCAGTCCCCTTTaGACAGCCTCCCGGCTGCTTCCCCCTCGGACCGGA +
Preference number: 6 (lower is better)
Translates to: CCCCCCHEFSPL*TASRLLPPRTG
Trigger: TCCGGTCCGAGGGGGAAGCAGCCGGGAGGCTGTGCAAAGGGGACTGAATTCGTGGCAGCAGCAGCAGCAGCA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000615025.5
ENST00000646520.1
ENST00000651849.1
ENST00000682258.1
CDS GCA 72 bp GGAGGTGGGCGAGGCTGCTGCTGCTGCTGCTGCTGCTaGTGCCACGAATTCAGTCCCCTTTGCACAGCCTCC +
Preference number: 6 (lower is better)
Translates to: GGGRGCCCCCCC*CHEFSPLCTAS
Trigger: GGAGGCTGTGCAAAGGGGACTGAATTCGTGGCAGCAGCAGCAGCAGCAGCAGCAGCAGCCTCGCCCACCTCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000615025.5
ENST00000646520.1
ENST00000651849.1
ENST00000682258.1
CDS GCA 72 bp CGTGGAGGTGGGCGAGGCTGCTGCTGCTGCTGCTGCTaGTGCTGCCACGAATTCAGTCCCCTTTGCACAGCC +
Preference number: 6 (lower is better)
Translates to: RGGGRGCCCCCC*CCHEFSPLCTA
Trigger: GGCTGTGCAAAGGGGACTGAATTCGTGGCAGCAGCAGCAGCAGCAGCAGCAGCAGCCTCGCCCACCTCCACG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000615025.5
ENST00000646520.1
ENST00000651849.1
ENST00000682258.1
CDS GCA 72 bp TGCTGGCGTGGAGGTGGGCGAGGCTGCTGCTGCTGCTaGTGCTGCTGCTGCCACGAATTCAGTCCCCTTTGC +
Preference number: 6 (lower is better)
Translates to: CWRGGGRGCCCC*CCCCHEFSPLC
Trigger: GCAAAGGGGACTGAATTCGTGGCAGCAGCAGCAGCAGCAGCAGCAGCAGCCTCGCCCACCTCCACGCCAGCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000615025.5
ENST00000646520.1
ENST00000651849.1
ENST00000682258.1
CDS GCA 72 bp CTTTCCTGCTGGCGTGGAGGTGGGCGAGGCTGCTGCTaGTGCTGCTGCTGCTGCTGCCACGAATTCAGTCCC +
Preference number: 6 (lower is better)
Translates to: LSCWRGGGRGCC*CCCCCCHEFSP
Trigger: GGGACTGAATTCGTGGCAGCAGCAGCAGCAGCAGCAGCAGCAGCCTCGCCCACCTCCACGCCAGCAGGAAAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000615025.5
ENST00000646520.1
ENST00000651849.1
ENST00000682258.1
CDS GCA 72 bp AGCCACCATAGGCCACATGCCGGTCCAAGCAGGGGCTaGCGGGAACCACAGATCCAGACCCTCCGAGGTGAC +
Preference number: 6 (lower is better)
Translates to: SHHRPHAGPSRG*REPQIQTLRGD
Trigger: GTCACCTCGGAGGGTCTGGATCTGTGGTTCCCGGCAGCCCCTGCTTGGACCGGCATGTGGCCTATGGTGGCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000615025.5
ENST00000646520.1
ENST00000651849.1
ENST00000682258.1
CDS GCA 72 bp AGAAGTCGGGCAGAGTGTGGGAGAAGGAGACGGTGCTaGCCCCACTGGGACTGGACATGCCGCTGGCGACAG +
Preference number: 6 (lower is better)
Translates to: RSRAECGRRRRC*PHWDWTCRWRQ
Trigger: CTGTCGCCAGCGGCATGTCCAGTCCCAGTGGGGGCAGCACCGTCTCCTTCTCCCACACTCTGCCCGACTTCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000615025.5
ENST00000646520.1
ENST00000651849.1
ENST00000682258.1
CDS GCA 72 bp AAGAGGAGCCCCTGCACCCCTCTCCTGGCTCCGCAGTaGCTACGAGGCAGGATAGGTGGGTTCCGAGGTCCA +
Preference number: 6 (lower is better)
Translates to: KRSPCTPLLAPQ*LRGRIGGFRGP
Trigger: TGGACCTCGGAACCCACCTATCCTGCCTCGTAGGCACTGCGGAGCCAGGAGAGGGGTGCAGGGGCTCCTCTT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000439083.5
CDS GCA 72 bp CCACAGACACGCTCGGCCCGTTCTCCAGGTGCTCCATaGCTAAGTGGGATGGGAAAGGCAGCGGCAGTCGGG +
Preference number: 6 (lower is better)
Translates to: PQTRSARSPGAP*LSGMGKAAAVG
Trigger: CCCGACTGCCGCTGCCTTTCCCATCCCACTTAGGCATGGAGCACCTGGAGAACGGGCCGAGCGTGTCTGTGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479185.1
CDS CCA 72 bp GAGCCCCCTGCTGGGCGGGACCTGAGGTGCTGGGTGTaGTACATGGCGCCTTGCTTCTCTCGCTCTAAGCCA +
Preference number: 6 (lower is better)
Translates to: EPPAGRDLRCWV*YMAPCFSRSKP
Trigger: TGGCTTAGAGCGAGAGAAGCAAGGCGCCATGTACCACACCCAGCACCTCAGGTCCCGCCCAGCAGGGGGCTC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446903.5
ENST00000479185.1
ENST00000480665.1
ENST00000611415.4
ENST00000615025.5
ENST00000646520.1
ENST00000651849.1
ENST00000682258.1
CDS CCA 72 bp ACTCTCCAAGTGGGCTCTTTCCTGCTGGCGTGGAGGTaGGCGAGGCTGCTGCTGCTGCTGCTGCTGCTGCTG +
Preference number: 6 (lower is better)
Translates to: TLQVGSFLLAWR*ARLLLLLLLLL
Trigger: CAGCAGCAGCAGCAGCAGCAGCAGCAGCCTCGCCCACCTCCACGCCAGCAGGAAAGAGCCCACTTGGAGAGT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000615025.5
ENST00000646520.1
ENST00000651849.1
ENST00000682258.1
CDS CCA 72 bp TCTCCTGGCTCCGCAGTGCCTACGAGGCAGGATAGGTaGGTTCCGAGGTCCAGCTCCCAGCTGAGCCCCAAG +
Preference number: 6 (lower is better)
Translates to: SPGSAVPTRQDR*VPRSSSQLSPK
Trigger: CTTGGGGCTCAGCTGGGAGCTGGACCTCGGAACCCACCTATCCTGCCTCGTAGGCACTGCGGAGCCAGGAGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439083.5
CDS CAA 72 bp CTCAAACTGGGACTGCTGGGGGCAGCCATGCTGGGATaGATGGCCCGCCAGCCGAAGCCAGGACTAGGGGGA +
Preference number: 6 (lower is better)
Translates to: LKLGLLGAAMLG*MARQPKPGLGG
Trigger: TCCCCCTAGTCCTGGCTTCGGCTGGCGGGCCATCAATCCCAGCATGGCTGCCCCCAGCAGTCCCAGTTTGAG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000615025.5
ENST00000646520.1
ENST00000651849.1
ENST00000682258.1
CDS CAA 72 bp CTGTCGCGGATGATGAAGGCCCCCGGCTCCTGGTCCTaGAGGAGCGCGATGGCCTGCTCCCTGGAGATCTCA +
Preference number: 6 (lower is better)
Translates to: LSRMMKAPGSWS*RSAMACSLEIS
Trigger: TGAGATCTCCAGGGAGCAGGCCATCGCGCTCCTCAAGGACCAGGAGCCGGGGGCCTTCATCATCCGCGACAG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000495556.1
ENST00000611415.4
ENST00000615025.5
ENST00000646520.1
ENST00000651849.1
ENST00000682258.1
CDS GCA 72 bp TGGCGTGGAGGTGGGCGAGGCTGCTGCTGCTGCTGCTaGTGCTGCTGCCACGAATTCAGTCCCCTTTGCACA +
Preference number: 6 (lower is better)
Translates to: WRGGGRGCCCCC*CCCHEFSPLCT
Trigger: TGTGCAAAGGGGACTGAATTCGTGGCAGCAGCAGCAGCAGCAGCAGCAGCAGCCTCGCCCACCTCCACGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000615025.5
ENST00000646520.1
ENST00000651849.1
ENST00000682258.1
CDS GCA 72 bp GGGTGGTCGCTGCACTGCTCTGGGGGCTGGAGACAGTaGTACCATGGAAGCCAGTGCCTGGTGGACCCATCA +
Preference number: 6 (lower is better)
Translates to: GWSLHCSGGWRQ*YHGSQCLVDPS
Trigger: TGATGGGTCCACCAGGCACTGGCTTCCATGGTAGCACTGTCTCCAGCCCCCAGAGCAGTGCAGCGACCACCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000615025.5
ENST00000646520.1
ENST00000651849.1
ENST00000682258.1
CDS GCA 72 bp TGGCTATTGCATTGCTATGAAGACCGGAGGCCAGGTTaGCTTGGTGAGCCCCAGGGTGCCGGCCCAGGCTGG +
Preference number: 6 (lower is better)
Translates to: WLLHCYEDRRPG*LGEPQGAGPGW
Trigger: CCAGCCTGGGCCGGCACCCTGGGGCTCACCAAGGCAACCTGGCCTCCGGTCTTCATAGCAATGCAATAGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000615025.5
ENST00000646520.1
ENST00000651849.1
ENST00000682258.1
CDS CCA 72 bp CTGGCTACAAGACTCTCCAAGTGGGCTCTTTCCTGCTaGCGTGGAGGTGGGCGAGGCTGCTGCTGCTGCTGC +
Preference number: 6 (lower is better)
Translates to: LATRLSKWALSC*RGGGRGCCCCC
Trigger: GCAGCAGCAGCAGCAGCCTCGCCCACCTCCACGCCAGCAGGAAAGAGCCCACTTGGAGAGTCTTGTAGCCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000615025.5
ENST00000646520.1
ENST00000651849.1
ENST00000682258.1
CDS CCA 72 bp AAGTGCTGTGCCAATCTGCGGGCACACACCACAGGCTaGCTCCCGGGCTCTCCTGTGTGCCTGAGCTCACAC +
Preference number: 6 (lower is better)
Translates to: KCCANLRAHTTG*LPGSPVCLSSH
Trigger: GTGTGAGCTCAGGCACACAGGAGAGCCCGGGAGCCAGCCTGTGGTGTGTGCCCGCAGATTGGCACAGCACTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492338.2
CDS TCA 72 bp CTCCCAGGCACCGTGTGGACGCCAGCCACACTGAACTaGGCTCGAGCCTGGCTTTCCGGAGAGGAGCTGAAA +
Preference number: 6 (lower is better)
Translates to: LPGTVWTPATLN*ARAWLSGEELK
Trigger: TTTCAGCTCCTCTCCGGAAAGCCAGGCTCGAGCTCAGTTCAGTGTGGCTGGCGTCCACACGGTGCCTGGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000615025.5
ENST00000646520.1
ENST00000651849.1
ENST00000682258.1
CDS TCA 72 bp ACATGCCGCTGGCGACAGGCGAAGACACCTTCCCATTaGTGGTGGCATAGTTGGGGAGGCTGCCTGCCCGGT +
Preference number: 6 (lower is better)
Translates to: TCRWRQAKTPSH*WWHSWGGCLPG
Trigger: ACCGGGCAGGCAGCCTCCCCAACTATGCCACCATCAATGGGAAGGTGTCTTCGCCTGTCGCCAGCGGCATGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000615025.5
ENST00000646520.1
ENST00000651849.1
ENST00000682258.1
CDS TCA 72 bp ACGCAGGGGGCAGCCACCTTGGCCTGGCATTTCCGATaGCAGGAGAAGCTGCAGACTGCAAGAGGGCGAGAC +
Preference number: 6 (lower is better)
Translates to: TQGAATLAWHFR*QEKLQTARGRD
Trigger: GTCTCGCCCTCTTGCAGTCTGCAGCTTCTCCTGTCATCGGAAATGCCAGGCCAAGGTGGCTGCCCCCTGCGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000413280.5
CDS GCA 72 bp CGGTCTTGGTGGAGGCTGTGGAGTTGCCCGAGTCGCTaGTCACAGAAAGCGTGTGTTCCACGTGGTTGGGGG +
Preference number: 6 (lower is better)
Translates to: RSWWRLWSCPSR*SQKACVPRGWG
Trigger: CCCCCAACCACGTGGAACACACGCTTTCTGTGAGCAGCGACTCGGGCAACTCCACAGCCTCCACCAAGACCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000171887.8
ENST00000413554.5
ENST00000419504.5
ENST00000430930.5
ENST00000446903.5
ENST00000479185.1
ENST00000480665.1
ENST00000611415.4
ENST00000615025.5
ENST00000646520.1
ENST00000651849.1
ENST00000682258.1
CDS GCA 72 bp CCAGAGCATGCAGGACAGACAGATCCACGTCATCTTTaGTGGGTCCCGTCACTGAGGCACGCCCAGGGCCTG +
Preference number: 6 (lower is better)
Translates to: PEHAGQTDPRHL*WVPSLRHAQGL
Trigger: CAGGCCCTGGGCGTGCCTCAGTGACGGGACCCAGCAAAGATGACGTGGATCTGTCTGTCCTGCATGCTCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446903.5
ENST00000682258.1
CDS CCA 72 bp CCCGAGTCGCTGCTCACAGAAAGCGTGTGTTCCACGTaGTTGGGGGTGGCCGACAGTGTAGGACGTGTGGCA +
Preference number: 6 (lower is better)
Translates to: PESLLTESVCST*LGVADSVGRVA
Trigger: TGCCACACGTCCTACACTGTCGGCCACCCCCAACCACGTGGAACACACGCTTTCTGTGAGCAGCGACTCGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000171887.8
ENST00000413554.5
ENST00000419504.5
ENST00000430930.5
ENST00000446903.5
ENST00000479185.1
ENST00000480665.1
ENST00000611415.4
ENST00000615025.5
ENST00000646520.1
ENST00000651849.1
ENST00000682258.1
CDS CCA 72 bp TACAAGACTCTCCAAGTGGGCTCTTTCCTGCTGGCGTaGAGGTGGGCGAGGCTGCTGCTGCTGCTGCTGCTG +
Preference number: 6 (lower is better)
Translates to: YKTLQVGSFLLA*RWARLLLLLLL
Trigger: CAGCAGCAGCAGCAGCAGCAGCCTCGCCCACCTCCACGCCAGCAGGAAAGAGCCCACTTGGAGAGTCTTGTA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000615025.5
ENST00000646520.1
ENST00000651849.1
ENST00000682258.1
CDS CCA 72 bp GAGAAGAGCTCTGGTAGTTTCTCTGGGCAGACGGGCTaGGCTGTCCCAGGCTGCCTGAGCGGAAGCCAGACT +
Preference number: 6 (lower is better)
Translates to: EKSSGSFSGQTG*AVPGCLSGSQT
Trigger: AGTCTGGCTTCCGCTCAGGCAGCCTGGGACAGCCCAGCCCGTCTGCCCAGAGAAACTACCAGAGCTCTTCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000615025.5
ENST00000646520.1
ENST00000651849.1
ENST00000682258.1
CDS CCA 72 bp CCCGCGTCTCCGGGCTGTTGTCTGGCATGGAGTACTTaGAGAAGTCGGGCAGAGTGTGGGAGAAGGAGACGG +
Preference number: 6 (lower is better)
Translates to: PASPGCCLAWST*RSRAECGRRRR
Trigger: CCGTCTCCTTCTCCCACACTCTGCCCGACTTCTCCAAGTACTCCATGCCAGACAACAGCCCGGAGACGCGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000615025.5
ENST00000646520.1
ENST00000651849.1
ENST00000682258.1
CDS CAA 72 bp GCCCGCGTCTCCGGGCTGTTGTCTGGCATGGAGTACTaGGAGAAGTCGGGCAGAGTGTGGGAGAAGGAGACG +
Preference number: 6 (lower is better)
Translates to: ARVSGLLSGMEY*EKSGRVWEKET
Trigger: CGTCTCCTTCTCCCACACTCTGCCCGACTTCTCCAAGTACTCCATGCCAGACAACAGCCCGGAGACGCGGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000615025.5
ENST00000646520.1
ENST00000651849.1
ENST00000682258.1
CDS CAA 72 bp GCCAGAGCATGCAGGACAGACAGATCCACGTCATCTTaGCTGGGTCCCGTCACTGAGGCACGCCCAGGGCCT +
Preference number: 6 (lower is better)
Translates to: ARACRTDRSTSS*LGPVTEARPGP
Trigger: AGGCCCTGGGCGTGCCTCAGTGACGGGACCCAGCAAAGATGACGTGGATCTGTCTGTCCTGCATGCTCTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446903.5
ENST00000682258.1
CDS CAA 90 bp GAGTTGCCCGAGTCGCTGCTCACAGAAAGCGTGTGTTCCACGTGGTaGGGGGTGGCCGACAGTGTAGGACGTGTGGCATTAACAGCCCCG +
Preference number: 6 (lower is better)
Translates to: ELPESLLTESVCSTW*GVADSVGRVALTAP
Trigger: CGGGGCTGTTAATGCCACACGTCCTACACTGTCGGCCACCCCCAACCACGTGGAACACACGCTTTCTGTGAGCAGCGACTCGGGCAACTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000171887.8
ENST00000413554.5
ENST00000419504.5
ENST00000430930.5
ENST00000446903.5
ENST00000479185.1
ENST00000480665.1
ENST00000611415.4
ENST00000615025.5
ENST00000646520.1
ENST00000651849.1
ENST00000682258.1
CDS CAA 90 bp GGGACAGGCTCGTCGGTCTTGTCGGTCTTGGTGGAGGCTGTGGAGTaGCCCGAGTCGCTGCTCACAGAAAGCGTGTGTTCCACGTGGTTG +
Preference number: 6 (lower is better)
Translates to: GTGSSVLSVLVEAVE*PESLLTESVCSTWL
Trigger: CAACCACGTGGAACACACGCTTTCTGTGAGCAGCGACTCGGGCAACTCCACAGCCTCCACCAAGACCGACAAGACCGACGAGCCTGTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446903.5
ENST00000479185.1
ENST00000480665.1
ENST00000611415.4
ENST00000615025.5
ENST00000646520.1
ENST00000651849.1
ENST00000682258.1
CDS CAA 90 bp GATCCTCTGGCCAGAGCATGCAGGACAGACAGATCCACGTCATCTTaGCTGGGTCCCGTCACTGAGGCACGCCCAGGGCCTGTGAAGAGC +
Preference number: 6 (lower is better)
Translates to: DPLARACRTDRSTSS*LGPVTEARPGPVKS
Trigger: GCTCTTCACAGGCCCTGGGCGTGCCTCAGTGACGGGACCCAGCAAAGATGACGTGGATCTGTCTGTCCTGCATGCTCTGGCCAGAGGATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446903.5
ENST00000682258.1
CDS CAA 90 bp CAGGGCTTCACCTTCTTGAAGGTCTTCACCTTGAAGCGGTGTGTCTaGGGGGCCTCCAGATCCTCTGGCTGGCTGCGGAGGCAGAAGCGC +
Preference number: 6 (lower is better)
Translates to: QGFTFLKVFTLKRCV*GASRSSGWLRRQKR
Trigger: GCGCTTCTGCCTCCGCAGCCAGCCAGAGGATCTGGAGGCCCCCAAGACACACCGCTTCAAGGTGAAGACCTTCAAGAAGGTGAAGCCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000646520.1
CDS TCA 72 bp CCATGGAAGCCAGTGCCTGGTGGACCCATCATCTGGTaGTGGCTCAAACTGGGACTGCTGGGGGCAGCCATG +
Preference number: 6 (lower is better)
Translates to: PWKPVPGGPIIW*WLKLGLLGAAM
Trigger: CATGGCTGCCCCCAGCAGTCCCAGTTTGAGCCATCACCAGATGATGGGTCCACCAGGCACTGGCTTCCATGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000615025.5
ENST00000646520.1
ENST00000651849.1
ENST00000682258.1
CDS TCA 72 bp AGACAGATCCACGTCATCTTTGCTGGGTCCCGTCACTaGGGCACGCCCAGGGCCTGTGAAGAGCCCCTGAAG +
Preference number: 6 (lower is better)
Translates to: RQIHVIFAGSRH*GTPRACEEPLK
Trigger: CTTCAGGGGCTCTTCACAGGCCCTGGGCGTGCCTCAGTGACGGGACCCAGCAAAGATGACGTGGATCTGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000446903.5
ENST00000682258.1
CDS GCA 72 bp AGCTGTCCGGAAGAAGGCTCTGCCCAGAGTCCCAGCTaGCTCGGACCAATGAGCAGCTCCTCAGCAGTGAAG +
Preference number: 6 (lower is better)
Translates to: SCPEEGSAQSPS*LGPMSSSSAVK
Trigger: CTTCACTGCTGAGGAGCTGCTCATTGGTCCGAGGCAGCTGGGACTCTGGGCAGAGCCTTCTTCCGGACAGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439083.5
CDS GCA 72 bp CTCCCGGGCTCTCCTGTGTGCCTGAGCTCACACCACTaGAGGCTGGCATCTGAAAACTTGCGCCTGGTACAC +
Preference number: 6 (lower is better)
Translates to: LPGSPVCLSSHH*RLASENLRLVH
Trigger: GTGTACCAGGCGCAAGTTTTCAGATGCCAGCCTGCAGTGGTGTGAGCTCAGGCACACAGGAGAGCCCGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492338.2
CDS CCA 72 bp GGAGCGAACCCCAGGGCTACGAGGGGATGTGGCTTCTaGAGACTGGTTCTCATACTGTCCATCACTGGCCGC +
Preference number: 6 (lower is better)
Translates to: GANPRATRGCGF*RLVLILSITGR
Trigger: GCGGCCAGTGATGGACAGTATGAGAACCAGTCTCCAGAAGCCACATCCCCTCGTAGCCCTGGGGTTCGCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000615025.5
ENST00000646520.1
ENST00000651849.1
ENST00000682258.1
CDS CAA 72 bp CTGTGCAAATGGGGCTCTTTGGGCCGCCCTCCAGGATaGAGAGCGATGGTAAGAGCCAGCTCCGGGGAGACA +
Preference number: 6 (lower is better)
Translates to: LCKWGSLGRPPG*RAMVRASSGET
Trigger: TGTCTCCCCGGAGCTGGCTCTTACCATCGCTCTCAATCCTGGAGGGCGGCCCAAAGAGCCCCATTTGCACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000615025.5
ENST00000646520.1
ENST00000651849.1
ENST00000682258.1
CDS CAA 72 bp CAGAAGCGCAGGGGCAGGAGGCACGAGAAGAGGTACTaGCCCCATCGGATCACGCAGGAGAAGCACCAACTC +
Preference number: 6 (lower is better)
Translates to: QKRRGRRHEKRY*PHRITQEKHQL
Trigger: GAGTTGGTGCTTCTCCTGCGTGATCCGATGGGGCAAGTACCTCTTCTCGTGCCTCCTGCCCCTGCGCTTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646520.1
CDS CAA 90 bp CCTGTGTGCCTGAGCTCACACCACTGCAGGCTGGCATCTGAAAACTaGCGCCTGGTACACCCCCACCTAGGCACAGCTATCCCATCCCTG +
Preference number: 6 (lower is better)
Translates to: PVCLSSHHCRLASEN*RLVHPHLGTAIPSL
Trigger: CAGGGATGGGATAGCTGTGCCTAGGTGGGGGTGTACCAGGCGCAAGTTTTCAGATGCCAGCCTGCAGTGGTGTGAGCTCAGGCACACAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000492338.2
CDS TCA 72 bp ACTCCTGTGGGGTGCAACAGGATGTCCGCTGGGTTGTaGGGTTTCAGGCCCAGAGCAGACAGGGGTGTCTTG +
Preference number: 6 (lower is better)
Translates to: TPVGCNRMSAGL*GFRPRADRGVL
Trigger: CAAGACACCCCTGTCTGCTCTGGGCCTGAAACCTCACAACCCAGCGGACATCCTGTTGCACCCCACAGGAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000611415.4
CDS TCA 72 bp TCTCCTGTGGGGTGCAACAGGATGTCCGCTGGGTTGTaGGGTTTCAGGCCCAGAGCAGACAGGGGTGTCTTG +
Preference number: 6 (lower is better)
Translates to: SPVGCNRMSAGL*GFRPRADRGVL
Trigger: CAAGACACCCCTGTCTGCTCTGGGCCTGAAACCTCACAACCCAGCGGACATCCTGTTGCACCCCACAGGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000430930.5
ENST00000446688.5
ENST00000615025.5
ENST00000646520.1
ENST00000651849.1
ENST00000682258.1
CDS TCA 72 bp TGTGTGCCTGAGCTCACACCACTGCAGGCTGGCATCTaGAAACTTGCGCCTGGTACACCCCCACCTAGGCAC +
Preference number: 6 (lower is better)
Translates to: CVPELTPLQAGI*KLAPGTPPPRH
Trigger: GTGCCTAGGTGGGGGTGTACCAGGCGCAAGTTTTCAGATGCCAGCCTGCAGTGGTGTGAGCTCAGGCACACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000492338.2
CDS GCA 72 bp CGTCGGTCTTGTCGGTCTTGGTGGAGGCTGTGGAGTTaGCCGAGTCGCTGCTCACAGAAAGCGTGTGTTCCA +
Preference number: 6 (lower is better)
Translates to: RRSCRSWWRLWS*PSRCSQKACVP
Trigger: TGGAACACACGCTTTCTGTGAGCAGCGACTCGGGCAACTCCACAGCCTCCACCAAGACCGACAAGACCGACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000171887.8
ENST00000413554.5
ENST00000419504.5
ENST00000430930.5
ENST00000446903.5
ENST00000479185.1
ENST00000480665.1
ENST00000611415.4
ENST00000615025.5
ENST00000646520.1
ENST00000651849.1
ENST00000682258.1
CDS GCA 72 bp TGTTTCGATGGACTGTTCAATCTCCTGCTGGGAGGCTaGTCGCGGGAACTCAGGGAGACTGGGGATGGGGGT +
Preference number: 6 (lower is better)
Translates to: CFDGLFNLLLGG*SRELRETGDGG
Trigger: ACCCCCATCCCCAGTCTCCCTGAGTTCCCGCGAGCAGCCTCCCAGCAGGAGATTGAACAGTCCATCGAAACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000615025.5
ENST00000646520.1
ENST00000651849.1
ENST00000682258.1
CDS GCA 72 bp ACAGCATCTGACCCAGAGGACAGCTCAGTTCATGATTaGCAGATGGCTGCACGCAGCGCGGAGGAGGTGAGC +
Preference number: 6 (lower is better)
Translates to: TASDPEDSSVHD*QMAARSAEEVS
Trigger: GCTCACCTCCTCCGCGCTGCGTGCAGCCATCTGGCAATCATGAACTGAGCTGTCCTCTGGGTCAGATGCTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465306.1
CDS GCA 72 bp GTTGCACTGCTCTCTAGCACAGGCCTCAGAGTCAAGTaGTGTGCCAATCTGCGGGCACACACCACAGGCTGG +
Preference number: 6 (lower is better)
Translates to: VALLSSTGLRVK*CANLRAHTTGW
Trigger: CCAGCCTGTGGTGTGTGCCCGCAGATTGGCACAGCACTTGACTCTGAGGCCTGTGCTAGAGAGCAGTGCAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492338.2
CDS GCA 72 bp AGAAGCGCAGGGGCAGGAGGCACGAGAAGAGGTACTTaGCCCATCGGATCACGCAGGAGAAGCACCAACTCA +
Preference number: 6 (lower is better)
Translates to: RSAGAGGTRRGT*PIGSRRRSTNS
Trigger: TGAGTTGGTGCTTCTCCTGCGTGATCCGATGGGGCAAGTACCTCTTCTCGTGCCTCCTGCCCCTGCGCTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646520.1
CDS CCA 72 bp CCAAAGACAACCCCCAGGTCATGGATGGCACAGGTGTaGAACTGCACACGGAAGATGACGTCTCGGGCTGGG +
Preference number: 6 (lower is better)
Translates to: PKTTPRSWMAQV*NCTRKMTSRAG
Trigger: CCCAGCCCGAGACGTCATCTTCCGTGTGCAGTTCCACACCTGTGCCATCCATGACCTGGGGGTTGTCTTTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000171887.8
ENST00000310858.10
ENST00000413554.5
ENST00000419504.5
ENST00000430930.5
ENST00000446903.5
ENST00000453356.1
ENST00000479185.1
ENST00000611415.4
ENST00000615025.5
ENST00000646520.1
ENST00000651849.1
ENST00000682258.1
CDS CCA 72 bp GTGGGGCTGGCTCAGGGGTTCCCAACGAATGCCCACTaGGGATATAGCCAGATCTGGACTGGGTCAGTGGAT +
Preference number: 6 (lower is better)
Translates to: VGLAQGFPTNAH*GYSQIWTGSVD
Trigger: ATCCACTGACCCAGTCCAGATCTGGCTATATCCCCAGTGGGCATTCGTTGGGAACCCCTGAGCCAGCCCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000615025.5
ENST00000646520.1
ENST00000651849.1
ENST00000682258.1
CDS CCA 72 bp CCTCAGGGGTATCTCATGGCCATAGGCCTGGGTGGCTaGAGCACTAAAGCTCTTGGGCTCAGAGTCCTGAGC +
Preference number: 6 (lower is better)
Translates to: PQGYLMAIGLGG*STKALGLRVLS
Trigger: GCTCAGGACTCTGAGCCCAAGAGCTTTAGTGCTCCAGCCACCCAGGCCTATGGCCATGAGATACCCCTGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000615025.5
ENST00000646520.1
ENST00000651849.1
ENST00000682258.1
CDS CCA 72 bp CTGGGCAGAGACTTTGAAGTGAACGATGGTGGCAGCTaGCGTGGGGTCTGCAGCCAACGTCTCAGATGTGGC +
Preference number: 6 (lower is better)
Translates to: LGRDFEVNDGGS*RGVCSQRLRCG
Trigger: GCCACATCTGAGACGTTGGCTGCAGACCCCACGCCAGCTGCCACCATCGTTCACTTCAAAGTCTCTGCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000480416.1
ENST00000490566.1
ENST00000611415.4
ENST00000615025.5
ENST00000646520.1
ENST00000651849.1
ENST00000682258.1
CDS CCA 72 bp TATTCTTGGTCCAGCCCTTTGCAGGTGCAGCCTTCCTaGGTGATGACCTGGCGGCAGATCCCACAGGGCTTC +
Preference number: 6 (lower is better)
Translates to: YSWSSPLQVQPS*VMTWRQIPQGF
Trigger: GAAGCCCTGTGGGATCTGCCGCCAGGTCATCACCCAGGAAGGCTGCACCTGCAAAGGGCTGGACCAAGAATA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465306.1
CDS CAA 72 bp TCGTCGGTCTTGTCGGTCTTGGTGGAGGCTGTGGAGTaGCCCGAGTCGCTGCTCACAGAAAGCGTGTGTTCC +
Preference number: 6 (lower is better)
Translates to: SSVLSVLVEAVE*PESLLTESVCS
Trigger: GGAACACACGCTTTCTGTGAGCAGCGACTCGGGCAACTCCACAGCCTCCACCAAGACCGACAAGACCGACGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446903.5
ENST00000479185.1
ENST00000480665.1
ENST00000611415.4
ENST00000615025.5
ENST00000646520.1
ENST00000651849.1
ENST00000682258.1
CDS CAA 90 bp CAGGGCTTCACCTTCTTGAAGGTCTTCACCTTGAAGCGGTGTGTCTaGGGGGCCTCCAGATCCTCTGGCCAGAGCATGCAGGACAGACAG +
Preference number: 6 (lower is better)
Translates to: QGFTFLKVFTLKRCV*GASRSSGQSMQDRQ
Trigger: CTGTCTGTCCTGCATGCTCTGGCCAGAGGATCTGGAGGCCCCCAAGACACACCGCTTCAAGGTGAAGACCTTCAAGAAGGTGAAGCCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000446903.5
ENST00000682258.1
CDS CAA 90 bp AGGGAGGGAGGGAGAGGGAGGAAGCGGAGGGAAGCCCGCTCTGATTaGATCCTGGTGCCCCAAGTTCCCAATAATTCCTACATGGCTGCA +
Preference number: 6 (lower is better)
Translates to: REGGRGRKRREARSD*ILVPQVPNNSYMAA
Trigger: TGCAGCCATGTAGGAATTATTGGGAACTTGGGGCACCAGGATCAAATCAGAGCGGGCTTCCCTCCGCTTCCTCCCTCTCCCTCCCTCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480665.1
CDS GCA 72 bp TTCACCTTAGCATACAGGCTCCCATCTAGTGGCCCCTaGGTGTGTCCCACCACCTCCTCCATGCCGTCATCT +
Preference number: 6 (lower is better)
Translates to: FTLAYRLPSSGP*VCPTTSSMPSS
Trigger: AGATGACGGCATGGAGGAGGTGGTGGGACACACGCAGGGGCCACTAGATGGGAGCCTGTATGCTAAGGTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000171887.8
ENST00000413554.5
ENST00000419504.5
ENST00000430930.5
ENST00000446903.5
ENST00000479185.1
ENST00000611415.4
ENST00000615025.5
ENST00000646520.1
ENST00000651849.1
ENST00000682258.1
CDS GCA 72 bp TCTGGGGGCTGGAGACAGTGCTACCATGGAAGCCAGTaGCTGGTGGACCCATCATCTGGTGATGGCTCAAAC +
Preference number: 6 (lower is better)
Translates to: SGGWRQCYHGSQ*LVDPSSGDGSN
Trigger: GTTTGAGCCATCACCAGATGATGGGTCCACCAGGCACTGGCTTCCATGGTAGCACTGTCTCCAGCCCCCAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000615025.5
ENST00000646520.1
ENST00000651849.1
ENST00000682258.1
CDS GCA 72 bp GAAGGTGCAGGCAGAGACTGGGGTGATGCGTCTACATaGCAAGGGACACCAAGGATGCTGGCAGCCACAAGA +
Preference number: 6 (lower is better)
Translates to: EGAGRDWGDAST*QGTPRMLAATR
Trigger: TCTTGTGGCTGCCAGCATCCTTGGTGTCCCTTGGCATGTAGACGCATCACCCCAGTCTCTGCCTGCACCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495556.1
CDS CCA 72 bp CTGGCTGTCTCCTGGGATGTTGCTAAGGGAGAGAGGTaGGCAGAAAAAGAGTGGGCTGCTGGAGGGGAGATG +
Preference number: 6 (lower is better)
Translates to: LAVSWDVAKGER*AEKEWAAGGEM
Trigger: CATCTCCCCTCCAGCAGCCCACTCTTTTTCTGCCCACCTCTCTCCCTTAGCAACATCCCAGGAGACAGCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000479185.1
CDS CAA 72 bp GAGTCGCTGCTCACAGAAAGCGTGTGTTCCACGTGGTaGGGGGTGGCCGACAGTGTAGGACGTGTGGCATTA +
Preference number: 6 (lower is better)
Translates to: ESLLTESVCSTW*GVADSVGRVAL
Trigger: TAATGCCACACGTCCTACACTGTCGGCCACCCCCAACCACGTGGAACACACGCTTTCTGTGAGCAGCGACTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000171887.8
ENST00000413554.5
ENST00000419504.5
ENST00000430930.5
ENST00000446903.5
ENST00000479185.1
ENST00000480665.1
ENST00000611415.4
ENST00000615025.5
ENST00000646520.1
ENST00000651849.1
ENST00000682258.1
CDS CAA 72 bp TTTTGGCCGGCATTCAGCATGACCTTGGAGACGAAGTaGACGATGGCAGAGGCCGGCTGGTTGGGGTCAAGC +
Preference number: 6 (lower is better)
Translates to: FWPAFSMTLETK*TMAEAGWLGSS
Trigger: GCTTGACCCCAACCAGCCGGCCTCTGCCATCGTCAACTTCGTCTCCAAGGTCATGCTGAATGCCGGCCAAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000490566.1
ENST00000611415.4
ENST00000615025.5
ENST00000646520.1
ENST00000651849.1
ENST00000682258.1
CDS CAA 90 bp AGCACATTGCAGGCTGCCCCTTGTTTCAGCAGGTCTGCAGTTGAGTaGGCAGGGCCGGAGCTATCTTTCGATTCATCTGTGGGGTCTCGG +
Preference number: 6 (lower is better)
Translates to: STLQAAPCFSRSAVE*AGPELSFDSSVGSR
Trigger: CCGAGACCCCACAGATGAATCGAAAGATAGCTCCGGCCCTGCCAACTCAACTGCAGACCTGCTGAAACAAGGGGCAGCCTGCAATGTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000490566.1
ENST00000611415.4
ENST00000615025.5
ENST00000646520.1
ENST00000651849.1
ENST00000682258.1
CDS CAA 90 bp GAGCTACGTGGGATCAGGGACAGCAGGGAAATCACAGCCCCGACATaGAAAGGACATAAAGCCTCCAAAGGGTCATCCCAGGCATGGCCC +
Preference number: 6 (lower is better)
Translates to: ELRGIRDSREITAPT*KGHKASKGSSQAWP
Trigger: GGGCCATGCCTGGGATGACCCTTTGGAGGCTTTATGTCCTTTCAATGTCGGGGCTGTGATTTCCCTGCTGTCCCTGATCCCACGTAGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479185.1
CDS TCA 72 bp AGCCTGGCTTTCCGGAGAGGAGCTGAAATGCTGAAGTaGGTAGTCGGGGCTGCTGTAGCTACTGCCCACAGT +
Preference number: 6 (lower is better)
Translates to: SLAFRRGAEMLK*VVGAAVATAHS
Trigger: ACTGTGGGCAGTAGCTACAGCAGCCCCGACTACTCACTTCAGCATTTCAGCTCCTCTCCGGAAAGCCAGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000615025.5
ENST00000646520.1
ENST00000651849.1
ENST00000682258.1
CDS TCA 72 bp CCAGCGCCTTCTTATCCCCAGACTCATGCTTCCCCATaGAGGTTGCACTGCTCTCTAGCACAGGCCTCAGAG +
Preference number: 6 (lower is better)
Translates to: PAPSYPQTHASP*RLHCSLAQASE
Trigger: CTCTGAGGCCTGTGCTAGAGAGCAGTGCAACCTTCATGGGGAAGCATGAGTCTGGGGATAAGAAGGCGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000492338.2
CDS TCA 72 bp CTCTCCCAACAGAAGGTGACCCTTATCATGAGTGTCTaGCCTCCCACAGCAGGGGGCAGTGATGCAGTCTCC +
Preference number: 6 (lower is better)
Translates to: LSQQKVTLIMSV*PPTAGGSDAVS
Trigger: GGAGACTGCATCACTGCCCCCTGCTGTGGGAGGTCAGACACTCATGATAAGGGTCACCTTCTGTTGGGAGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000492338.2
CDS GCA 72 bp ATACACATCTTCTATCCAGCACCTTTGTGTGCCCCCTaGCCGCCAGCCACTCCCTCCATCTACCAAGGACCT +
Preference number: 6 (lower is better)
Translates to: IHIFYPAPLCAP*PPATPSIYQGP
Trigger: AGGTCCTTGGTAGATGGAGGGAGTGGCTGGCGGGCAGGGGGCACACAAAGGTGCTGGATAGAAGATGTGTAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000479185.1
CDS CCA 72 bp TTACAGATGCTGCAGATCTTCTCCAGGGCTGGGGTGTaGAGGTCGGGCCAGCCAAATTCCAGTACCTTGGCA +
Preference number: 6 (lower is better)
Translates to: LQMLQIFSRAGV*RSGQPNSSTLA
Trigger: TGCCAAGGTACTGGAATTTGGCTGGCCCGACCTCCACACCCCAGCCCTGGAGAAGATCTGCAGCATCTGTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000171887.8
ENST00000310858.10
ENST00000413280.5
ENST00000413554.5
ENST00000419504.5
ENST00000430930.5
ENST00000446903.5
ENST00000492338.2
ENST00000611415.4
ENST00000615025.5
ENST00000646520.1
ENST00000651849.1
ENST00000682258.1
CDS CCA 72 bp CAGCTTCCGAAAAGGATTGAGAGCGGAACATACCGCTaGGGTCATGGGCATAGTGGGAGGTGGTCACTGGCT +
Preference number: 6 (lower is better)
Translates to: QLPKRIESGTYR*GHGHSGRWSLA
Trigger: AGCCAGTGACCACCTCCCACTATGCCCATGACCCCAGCGGTATGTTCCGCTCTCAATCCTTTTCGGAAGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446903.5
ENST00000611415.4
ENST00000615025.5
ENST00000646520.1
ENST00000651849.1
ENST00000682258.1
CDS CCA 72 bp AGCAGTCCTGGCTCGATGGTGATGCAGACGCTAGTCTaGCTGTCTCCTGGGATGTTGCTAAGGGAGAGAGGT +
Preference number: 6 (lower is better)
Translates to: SSPGSMVMQTLV*LSPGMLLRERG
Trigger: ACCTCTCTCCCTTAGCAACATCCCAGGAGACAGCCAGACTAGCGTCTGCATCACCATCGAGCCAGGACTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479185.1
CDS CCA 72 bp AAAGGACATAAAGCCTCCAAAGGGTCATCCCAGGCATaGCCCTGCCCCCTCTTAAAACGCTCTCCGCTCCAG +
Preference number: 6 (lower is better)
Translates to: KGHKASKGSSQA*PCPLLKRSPLQ
Trigger: CTGGAGCGGAGAGCGTTTTAAGAGGGGGCAGGGCCATGCCTGGGATGACCCTTTGGAGGCTTTATGTCCTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000479185.1
CDS CAA 72 bp ACCTTCTTGAAGGTCTTCACCTTGAAGCGGTGTGTCTaGGGGGCCTCCAGATCCTCTGGCCAGAGCATGCAG +
Preference number: 6 (lower is better)
Translates to: TFLKVFTLKRCV*GASRSSGQSMQ
Trigger: CTGCATGCTCTGGCCAGAGGATCTGGAGGCCCCCAAGACACACCGCTTCAAGGTGAAGACCTTCAAGAAGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000446903.5
ENST00000682258.1
CDS CAA 90 bp CGAAGAGCACATTGCAGGCTGCCCCTTGTTTCAGCAGGTCTGCAGTaGAGTTGGCAGGGCCGGAGCTATCTTTCGATTCATCTGTGGGGT +
Preference number: 6 (lower is better)
Translates to: RRAHCRLPLVSAGLQ*SWQGRSYLSIHLWG
Trigger: ACCCCACAGATGAATCGAAAGATAGCTCCGGCCCTGCCAACTCAACTGCAGACCTGCTGAAACAAGGGGCAGCCTGCAATGTGCTCTTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000490566.1
ENST00000611415.4
ENST00000615025.5
ENST00000646520.1
ENST00000651849.1
ENST00000682258.1
CDS TCA 72 bp CCTGTGTCAGCTTTGGTACCGTGCTCCATGATTGTCTaGCTGTGTCTGTCTTCCCAGGTAAGGGGCTGGCTC +
Preference number: 6 (lower is better)
Translates to: PVSALVPCSMIV*LCLSSQVRGWL
Trigger: GAGCCAGCCCCTTACCTGGGAAGACAGACACAGTCAGACAATCATGGAGCACGGTACCAAAGCTGACACAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465306.1
CDS GCA 72 bp GTAGGACGTGTGGCATTAACAGCCCCGGTGCTGCCGTaGAGGGAGTCTTTCTTCTTCACCTTAGCATACAGG +
Preference number: 6 (lower is better)
Translates to: VGRVALTAPVLP*RESFFFTLAYR
Trigger: CCTGTATGCTAAGGTGAAGAAGAAAGACTCCCTGCACGGCAGCACCGGGGCTGTTAATGCCACACGTCCTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000171887.8
ENST00000413554.5
ENST00000419504.5
ENST00000430930.5
ENST00000446903.5
ENST00000479185.1
ENST00000480665.1
ENST00000611415.4
ENST00000615025.5
ENST00000646520.1
ENST00000651849.1
ENST00000682258.1
CDS GCA 72 bp AATGCTGAAGTGAGTAGTCGGGGCTGCTGTAGCTACTaGCCACAGTCGGGAGAGGAGAAGAGCTCTGGTAGT +
Preference number: 6 (lower is better)
Translates to: NAEVSSRGCCSY*PQSGEEKSSGS
Trigger: ACTACCAGAGCTCTTCTCCTCTCCCGACTGTGGGCAGTAGCTACAGCAGCCCCGACTACTCACTTCAGCATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000611415.4
ENST00000615025.5
ENST00000646520.1
ENST00000651849.1
ENST00000682258.1
CDS GCA 72 bp TTTGAAGTGAACGATGGTGGCAGCTGGCGTGGGGTCTaGAGCCAACGTCTCAGATGTGGCTTTAGAGATGGC +
Preference number: 6 (lower is better)
Translates to: FEVNDGGSWRGV*SQRLRCGFRDG
Trigger: GCCATCTCTAAAGCCACATCTGAGACGTTGGCTGCAGACCCCACGCCAGCTGCCACCATCGTTCACTTCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000480416.1
ENST00000490566.1
ENST00000611415.4
ENST00000615025.5
ENST00000646520.1
ENST00000651849.1
ENST00000682258.1
CDS GCA 72 bp CCTGTACCCCTTTCCTCTCCTTCACAAGCTGCTCCATaGCAGTTCCTATGCTGGTTCCCTCCTCCTGTCTGT +
Preference number: 6 (lower is better)
Translates to: PVPLSSPSQAAP*QFLCWFPPPVC
Trigger: ACAGACAGGAGGAGGGAACCAGCATAGGAACTGGCATGGAGCAGCTTGTGAAGGAGAGGAAAGGGGTACAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446688.5
CDS CCA 72 bp GCACTTCAGCAAGATGTCTCCCTTCAAGAGCAGTCCTaGCTCGATGGTGATGCAGACGCTAGTCTGGCTGTC +
Preference number: 6 (lower is better)
Translates to: ALQQDVSLQEQS*LDGDADASLAV
Trigger: GACAGCCAGACTAGCGTCTGCATCACCATCGAGCCAGGACTGCTCTTGAAGGGAGACATCTTGCTGAAGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000171887.8
ENST00000310858.10
ENST00000413554.5
ENST00000419504.5
ENST00000430930.5
ENST00000446903.5
ENST00000453356.1
ENST00000479185.1
ENST00000611415.4
ENST00000615025.5
ENST00000646520.1
ENST00000651849.1
ENST00000682258.1
CDS CCA 72 bp AGGCTGCCCCTTGTTTCAGCAGGTCTGCAGTTGAGTTaGCAGGGCCGGAGCTATCTTTCGATTCATCTGTGG +
Preference number: 6 (lower is better)
Translates to: RLPLVSAGLQLS*QGRSYLSIHLW
Trigger: CCACAGATGAATCGAAAGATAGCTCCGGCCCTGCCAACTCAACTGCAGACCTGCTGAAACAAGGGGCAGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000490566.1
ENST00000611415.4
ENST00000615025.5
ENST00000646520.1
ENST00000651849.1
ENST00000682258.1
CDS CAA 72 bp AGTTCCTATGCTGGTTCCCTCCTCCTGTCTGTAGCCTaGGAATGTGGGAGGTTCCAGGACTCCATCCTTGGG +
Preference number: 6 (lower is better)
Translates to: SSYAGSLLLSVA*ECGRFQDSILG
Trigger: CCCAAGGATGGAGTCCTGGAACCTCCCACATTCCAAGGCTACAGACAGGAGGAGGGAACCAGCATAGGAACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446688.5
CDS TCA 72 bp GGATCAGGGACAGCAGGGAAATCACAGCCCCGACATTaGAAGGACATAAAGCCTCCAAAGGGTCATCCCAGG +
Preference number: 6 (lower is better)
Translates to: GSGTAGKSQPRH*KDIKPPKGHPR
Trigger: CCTGGGATGACCCTTTGGAGGCTTTATGTCCTTTCAATGTCGGGGCTGTGATTTCCCTGCTGTCCCTGATCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479185.1
CDS TCA 72 bp GCAGTGATGCAGTCTCCCGTAGACTCATCCAAGCACTaGAGCAATCCTGCTTCCAGGGCCAAGAACAGCACA +
Preference number: 6 (lower is better)
Translates to: AVMQSPVDSSKH*SNPASRAKNST
Trigger: TGTGCTGTTCTTGGCCCTGGAAGCAGGATTGCTTCAGTGCTTGGATGAGTCTACGGGAGACTGCATCACTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492338.2
CDS GCA 72 bp AGCATATTGAGTGTTTCGATGGACTGTTCAATCTCCTaGTGGGAGGCTGCTCGCGGGAACTCAGGGAGACTG +
Preference number: 6 (lower is better)
Translates to: SILSVSMDCSIS*WEAARGNSGRL
Trigger: CAGTCTCCCTGAGTTCCCGCGAGCAGCCTCCCAGCAGGAGATTGAACAGTCCATCGAAACACTCAATATGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000615025.5
ENST00000646520.1
ENST00000651849.1
ENST00000682258.1
CDS GCA 72 bp CCACCTTGGCCTGGCATTTCCGATGACAGGAGAAGCTaGAGACTGCAAGAGGGCGAGACACAGAAAGAAAGT +
Preference number: 6 (lower is better)
Translates to: PPWPGISDDRRS*RLQEGETQKES
Trigger: ACTTTCTTTCTGTGTCTCGCCCTCTTGCAGTCTGCAGCTTCTCCTGTCATCGGAAATGCCAGGCCAAGGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413280.5
CDS CAA 72 bp CAATGGGCACAATCTTATCCTCATAGAACCGCTTCATaGCAAACCGGTCCAGAGCCTGGTCCGCACTGGCAG +
Preference number: 6 (lower is better)
Translates to: QWAQSYPHRTAS*QTGPEPGPHWQ
Trigger: CTGCCAGTGCGGACCAGGCTCTGGACCGGTTTGCAATGAAGCGGTTCTATGAGGATAAGATTGTGCCCATTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000171887.8
ENST00000310858.10
ENST00000413554.5
ENST00000419504.5
ENST00000430930.5
ENST00000446903.5
ENST00000492338.2
ENST00000611415.4
ENST00000615025.5
ENST00000646520.1
ENST00000651849.1
ENST00000682258.1
CDS CAA 72 bp CATTGCAGGCTGCCCCTTGTTTCAGCAGGTCTGCAGTaGAGTTGGCAGGGCCGGAGCTATCTTTCGATTCAT +
Preference number: 6 (lower is better)
Translates to: HCRLPLVSAGLQ*SWQGRSYLSIH
Trigger: ATGAATCGAAAGATAGCTCCGGCCCTGCCAACTCAACTGCAGACCTGCTGAAACAAGGGGCAGCCTGCAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000490566.1
ENST00000611415.4
ENST00000615025.5
ENST00000646520.1
ENST00000651849.1
ENST00000682258.1
CDS CAA 90 bp ATGGCTGGCCAATGGGCACAATCTTATCCTCATAGAACCGCTTCATaGCAAACCGGTCCAGAGCCTGGTCCGCACTGGCAGAAATGTTGC +
Preference number: 6 (lower is better)
Translates to: MAGQWAQSYPHRTAS*QTGPEPGPHWQKCC
Trigger: GCAACATTTCTGCCAGTGCGGACCAGGCTCTGGACCGGTTTGCAATGAAGCGGTTCTATGAGGATAAGATTGTGCCCATTGGCCAGCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000171887.8
ENST00000310858.10
ENST00000413554.5
ENST00000419504.5
ENST00000430930.5
ENST00000446903.5
ENST00000492338.2
ENST00000611415.4
ENST00000615025.5
ENST00000646520.1
ENST00000651849.1
ENST00000682258.1
CDS CAA 90 bp CCTTCCTGCTGCAGATTCAGCCAACTCTTTTTGCCTTGGTCCTCATaGCAGGCAAGAGTGGATCACCACTCAGACACTACTGGGTGGCTC +
Preference number: 6 (lower is better)
Translates to: PSCCRFSQLFLPWSS*QARVDHHSDTTGWL
Trigger: GAGCCACCCAGTAGTGTCTGAGTGGTGATCCACTCTTGCCTGCAATGAGGACCAAGGCAAAAAGAGTTGGCTGAATCTGCAGCAGGAAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310858.10
CDS TCA 72 bp GTTAGGCCCAGCCAAACATGGCTGATAGTCATAAGGTaGGTAAGACCTGCCAGGAGGGACAGACTCCAGAGA +
Preference number: 6 (lower is better)
Translates to: VRPSQTWLIVIR*VRPARRDRLQR
Trigger: TCTCTGGAGTCTGTCCCTCCTGGCAGGTCTTACTCACCTTATGACTATCAGCCATGTTTGGCTGGGCCTAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000611415.4
ENST00000615025.5
ENST00000646520.1
ENST00000651849.1
ENST00000682258.1
CDS TCA 72 bp CTTTGGGAAGGCCAGTGTGTGTCTGGCCAGGTATATTaGTCCTCCAGGCCACCTGAGATGCTTCCAATTGAC +
Preference number: 6 (lower is better)
Translates to: LWEGQCVSGQVY*SSRPPEMLPID
Trigger: GTCAATTGGAAGCATCTCAGGTGGCCTGGAGGATCAATATACCTGGCCAGACACACACTGGCCTTCCCAAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310858.10
CDS GCA 72 bp AATGGGCACAATCTTATCCTCATAGAACCGCTTCATTaGAAACCGGTCCAGAGCCTGGTCCGCACTGGCAGA +
Preference number: 6 (lower is better)
Translates to: NGHNLILIEPLH*KPVQSLVRTGR
Trigger: TCTGCCAGTGCGGACCAGGCTCTGGACCGGTTTGCAATGAAGCGGTTCTATGAGGATAAGATTGTGCCCATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000171887.8
ENST00000310858.10
ENST00000413554.5
ENST00000419504.5
ENST00000430930.5
ENST00000446903.5
ENST00000492338.2
ENST00000611415.4
ENST00000615025.5
ENST00000646520.1
ENST00000651849.1
ENST00000682258.1
CDS CCA 72 bp CCCCAGAGACCCACCTTCTTTGGGATGGCTGGCCAATaGGCACAATCTTATCCTCATAGAACCGCTTCATTG +
Preference number: 6 (lower is better)
Translates to: PQRPTFFGMAGQ*AQSYPHRTASL
Trigger: CAATGAAGCGGTTCTATGAGGATAAGATTGTGCCCATTGGCCAGCCATCCCAAAGAAGGTGGGTCTCTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492338.2
CDS CAA 72 bp ATGCCGTGCATGATCACGTGGTGCAGAAACAAGGGCTaGTTGTTCATTTTGATGGAGCCGGAGAGCAGGCCA +
Preference number: 6 (lower is better)
Translates to: MPCMITWCRNKG*LFILMEPESRP
Trigger: TGGCCTGCTCTCCGGCTCCATCAAAATGAACAACAAGCCCTTGTTTCTGCACCACGTGATCATGCACGGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000171887.8
ENST00000310858.10
ENST00000413554.5
ENST00000419504.5
ENST00000430930.5
ENST00000446903.5
ENST00000611415.4
ENST00000615025.5
ENST00000646520.1
ENST00000651849.1
ENST00000682258.1
CDS CAA 72 bp CGGAGAAATGGCCGACATCCTCCTTTAGACTCAAAGTaGGGGATGCCGTGCATGATCACGTGGTGCAGAAAC +
Preference number: 6 (lower is better)
Translates to: RRNGRHPPLDSK*GMPCMITWCRN
Trigger: GTTTCTGCACCACGTGATCATGCACGGCATCCCCAACTTTGAGTCTAAAGGAGGATGTCGGCCATTTCTCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000171887.8
ENST00000310858.10
ENST00000413554.5
ENST00000419504.5
ENST00000430930.5
ENST00000446903.5
ENST00000611415.4
ENST00000615025.5
ENST00000646520.1
ENST00000651849.1
ENST00000682258.1
CDS TCA 72 bp AGATGTGGCTTTAGAGATGGCCTGTGGCCCAGTGAGTaGCTCCATGTCCACAGAGTTGACGAAGAGCACATT +
Preference number: 6 (lower is better)
Translates to: RCGFRDGLWPSE*LHVHRVDEEHI
Trigger: AATGTGCTCTTCGTCAACTCTGTGGACATGGAGTCACTCACTGGGCCACAGGCCATCTCTAAAGCCACATCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000171887.8
ENST00000419504.5
ENST00000430930.5
ENST00000446688.5
ENST00000480416.1
ENST00000490566.1
ENST00000611415.4
ENST00000615025.5
ENST00000646520.1
ENST00000651849.1
ENST00000682258.1
CDS TCA 72 bp CTGGTGGAGCCCTCCAAAACACAATCCTTCCTTTGCTaGAAGGGCACCATGAAAGGAAATTCGACAGCCTCC +
Preference number: 6 (lower is better)
Translates to: LVEPSKTQSFLC*KGTMKGNSTAS
Trigger: GGAGGCTGTCGAATTTCCTTTCATGGTGCCCTTTCAGCAAAGGAAGGATTGTGTTTTGGAGGGCTCCACCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310858.10
CDS TCA 72 bp GGCGAGACACAGAAAGAAAGTTTTAGCCGCGAGGTATaGAATGGAAACTCCGCGAAATCTCCTCCCACCCCA +
Preference number: 6 (lower is better)
Translates to: GETQKESFSREV*NGNSAKSPPTP
Trigger: TGGGGTGGGAGGAGATTTCGCGGAGTTTCCATTTCATACCTCGCGGCTAAAACTTTCTTTCTGTGTCTCGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413280.5
CDS TCA 72 bp TCAAGTGGTAAATGTGTGGGTACACGGATGAATAGATaGGTCACAGGAAGGAGAACCCCACCGAGGAGCAGG +
Preference number: 6 (lower is better)
Translates to: SSGKCVGTRMNR*VTGRRTPPRSR
Trigger: CCTGCTCCTCGGTGGGGTTCTCCTTCCTGTGACTCATCTATTCATCCGTGTACCCACACATTTACCACTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480416.1
CDS GCA 72 bp CGACATCCTCCTTTAGACTCAAAGTTGGGGATGCCGTaGATGATCACGTGGTGCAGAAACAAGGGCTTGTTG +
Preference number: 6 (lower is better)
Translates to: RHPPLDSKLGMP*MITWCRNKGLL
Trigger: CAACAAGCCCTTGTTTCTGCACCACGTGATCATGCACGGCATCCCCAACTTTGAGTCTAAAGGAGGATGTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000171887.8
ENST00000310858.10
ENST00000413554.5
ENST00000419504.5
ENST00000430930.5
ENST00000446903.5
ENST00000611415.4
ENST00000615025.5
ENST00000646520.1
ENST00000651849.1
ENST00000682258.1
CDS GCA 72 bp CTCATCCTTCCTGCTGCAGATTCAGCCAACTCTTTTTaGCTTGGTCCTCATTGCAGGCAAGAGTGGATCACC +
Preference number: 6 (lower is better)
Translates to: LILPAADSANSF*LGPHCRQEWIT
Trigger: GGTGATCCACTCTTGCCTGCAATGAGGACCAAGGCAAAAAGAGTTGGCTGAATCTGCAGCAGGAAGGATGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310858.10
CDS CCA 72 bp CCTTCCTGCTGCAGATTCAGCCAACTCTTTTTGCCTTaGTCCTCATTGCAGGCAAGAGTGGATCACCACTCA +
Preference number: 6 (lower is better)
Translates to: PSCCRFSQLFLP*SSLQARVDHHS
Trigger: TGAGTGGTGATCCACTCTTGCCTGCAATGAGGACCAAGGCAAAAAGAGTTGGCTGAATCTGCAGCAGGAAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310858.10
CDS CAA 72 bp TCCTTCCTGCTGCAGATTCAGCCAACTCTTTTTGCCTaGGTCCTCATTGCAGGCAAGAGTGGATCACCACTC +
Preference number: 6 (lower is better)
Translates to: SFLLQIQPTLFA*VLIAGKSGSPL
Trigger: GAGTGGTGATCCACTCTTGCCTGCAATGAGGACCAAGGCAAAAAGAGTTGGCTGAATCTGCAGCAGGAAGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310858.10
CDS CAA 72 bp CCTCATCCTTCCTGCTGCAGATTCAGCCAACTCTTTTaGCCTTGGTCCTCATTGCAGGCAAGAGTGGATCAC +
Preference number: 6 (lower is better)
Translates to: PHPSCCRFSQLF*PWSSLQARVDH
Trigger: GTGATCCACTCTTGCCTGCAATGAGGACCAAGGCAAAAAGAGTTGGCTGAATCTGCAGCAGGAAGGATGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310858.10
CDS CAA 72 bp GACCCTGGTGGAGCCCTCCAAAACACAATCCTTCCTTaGCTGAAAGGGCACCATGAAAGGAAATTCGACAGC +
Preference number: 6 (lower is better)
Translates to: DPGGALQNTILP*LKGHHERKFDS
Trigger: GCTGTCGAATTTCCTTTCATGGTGCCCTTTCAGCAAAGGAAGGATTGTGTTTTGGAGGGCTCCACCAGGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310858.10
CDS CAA 90 bp CTTTGGATTCTGGCTTGGCAACTTGACATTTTGGAGGGCCTAACTTaGGGAAGGCCAGTGTGTGTCTGGCCAGGTATATTGATCCTCCAG +
Preference number: 6 (lower is better)
Translates to: LWILAWQLDILEGLT*GRPVCVWPGILILQ
Trigger: CTGGAGGATCAATATACCTGGCCAGACACACACTGGCCTTCCCAAAGTTAGGCCCTCCAAAATGTCAAGTTGCCAAGCCAGAATCCAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310858.10
CDS GCA 72 bp GCAGATTCAGCCAACTCTTTTTGCCTTGGTCCTCATTaGAGGCAAGAGTGGATCACCACTCAGACACTACTG +
Preference number: 6 (lower is better)
Translates to: ADSANSFCLGPH*RQEWITTQTLL
Trigger: CAGTAGTGTCTGAGTGGTGATCCACTCTTGCCTGCAATGAGGACCAAGGCAAAAAGAGTTGGCTGAATCTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310858.10
CDS GCA 72 bp AGGTCACACAGGATTAGGGTGAGCCTTAATCCAGTATaGCTGTATGCCTGGTGTCCTTACAAGGAGAGGAGA +
Preference number: 6 (lower is better)
Translates to: RSHRIRVSLNPV*LYAWCPYKERR
Trigger: TCTCCTCTCCTTGTAAGGACACCAGGCATACAGGCATACTGGATTAAGGCTCACCCTAATCCTGTGTGACCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495556.1
CDS CCA 72 bp GCTCCTAGTCAAGTCTGTCAGGGTGAGTTACCTTCCTaGCTTGGCAGTCCTTTCTTTAGTCTATCCAGAGTC +
Preference number: 6 (lower is better)
Translates to: APSQVCQGELPS*LGSPFFSLSRV
Trigger: GACTCTGGATAGACTAAAGAAAGGACTGCCAAGCCAGGAAGGTAACTCACCCTGACAGACTTGACTAGGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479185.1
CDS CAA 72 bp CTAGTCAAGTCTGTCAGGGTGAGTTACCTTCCTGGCTaGGCAGTCCTTTCTTTAGTCTATCCAGAGTCCCTC +
Preference number: 6 (lower is better)
Translates to: LVKSVRVSYLPG*AVLSLVYPESL
Trigger: GAGGGACTCTGGATAGACTAAAGAAAGGACTGCCAAGCCAGGAAGGTAACTCACCCTGACAGACTTGACTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479185.1
CDS TCA 72 bp TGTTGTGTAGAACAACGACATTGTGAGGGTCTGCATTaGGCCATGTGTCCATGGCCTTACAGATGCTGCAGA +
Preference number: 6 (lower is better)
Translates to: CCVEQRHCEGLH*AMCPWPYRCCR
Trigger: TCTGCAGCATCTGTAAGGCCATGGACACATGGCTCAATGCAGACCCTCACAATGTCGTTGTTCTACACAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000171887.8
ENST00000310858.10
ENST00000413554.5
ENST00000419504.5
ENST00000430930.5
ENST00000446903.5
ENST00000492338.2
ENST00000611415.4
ENST00000615025.5
ENST00000646520.1
ENST00000651849.1
ENST00000682258.1
CDS TCA 72 bp CCAAAACACAATCCTTCCTTTGCTGAAAGGGCACCATaGAAGGAAATTCGACAGCCTCCCAGACAGAGTGTC +
Preference number: 6 (lower is better)
Translates to: PKHNPSFAERAP*KEIRQPPRQSV
Trigger: GACACTCTGTCTGGGAGGCTGTCGAATTTCCTTTCATGGTGCCCTTTCAGCAAAGGAAGGATTGTGTTTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310858.10
CDS GCA 72 bp GACTCAAAGTTGGGGATGCCGTGCATGATCACGTGGTaGAGAAACAAGGGCTTGTTGTTCATTTTGATGGAG +
Preference number: 6 (lower is better)
Translates to: DSKLGMPCMITW*RNKGLLFILME
Trigger: CTCCATCAAAATGAACAACAAGCCCTTGTTTCTGCACCACGTGATCATGCACGGCATCCCCAACTTTGAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000171887.8
ENST00000310858.10
ENST00000413554.5
ENST00000419504.5
ENST00000430930.5
ENST00000446903.5
ENST00000611415.4
ENST00000615025.5
ENST00000646520.1
ENST00000651849.1
ENST00000682258.1
CDS GCA 72 bp AGGAATTTCCTCCTGGTATCTAACCCTCATCCTTCCTaGTGCAGATTCAGCCAACTCTTTTTGCCTTGGTCC +
Preference number: 6 (lower is better)
Translates to: RNFLLVSNPHPS*CRFSQLFLPWS
Trigger: GGACCAAGGCAAAAAGAGTTGGCTGAATCTGCAGCAGGAAGGATGAGGGTTAGATACCAGGAGGAAATTCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310858.10
CDS CAA 72 bp TGCAGATTCAGCCAACTCTTTTTGCCTTGGTCCTCATaGCAGGCAAGAGTGGATCACCACTCAGACACTACT +
Preference number: 6 (lower is better)
Translates to: CRFSQLFLPWSS*QARVDHHSDTT
Trigger: AGTAGTGTCTGAGTGGTGATCCACTCTTGCCTGCAATGAGGACCAAGGCAAAAAGAGTTGGCTGAATCTGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310858.10
CDS TCA 72 bp GGAATCAATCAAGTGGTAAATGTGTGGGTACACGGATaGATAGATGAGTCACAGGAAGGAGAACCCCACCGA +
Preference number: 6 (lower is better)
Translates to: GINQVVNVWVHG*IDESQEGEPHR
Trigger: TCGGTGGGGTTCTCCTTCCTGTGACTCATCTATTCATCCGTGTACCCACACATTTACCACTTGATTGATTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480416.1
CDS GCA 72 bp CTGGCCAGGTATATTGATCCTCCAGGCCACCTGAGATaGTTCCAATTGACTGGCTATTGGTATTCTGTTTGT +
Preference number: 6 (lower is better)
Translates to: LARYIDPPGHLR*FQLTGYWYSVC
Trigger: ACAAACAGAATACCAATAGCCAGTCAATTGGAAGCATCTCAGGTGGCCTGGAGGATCAATATACCTGGCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310858.10
CDS CCA 72 bp AGTAATGCACGTACCTTCTTTGGGATGGCTGGCCAATaGGCACAATCTTATCCTCATAGAACCGCTTCATTG +
Preference number: 6 (lower is better)
Translates to: SNARTFFGMAGQ*AQSYPHRTASL
Trigger: CAATGAAGCGGTTCTATGAGGATAAGATTGTGCCCATTGGCCAGCCATCCCAAAGAAGGTACGTGCATTACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000171887.8
ENST00000310858.10
ENST00000413554.5
ENST00000419504.5
ENST00000430930.5
ENST00000446903.5
ENST00000611415.4
ENST00000615025.5
ENST00000646520.1
ENST00000651849.1
ENST00000682258.1
CDS CCA 72 bp ATTAGGGTGAGCCTTAATCCAGTATGCCTGTATGCCTaGTGTCCTTACAAGGAGAGGAGACAGAGATACACA +
Preference number: 6 (lower is better)
Translates to: IRVSLNPVCLYA*CPYKERRQRYT
Trigger: TGTGTATCTCTGTCTCCTCTCCTTGTAAGGACACCAGGCATACAGGCATACTGGATTAAGGCTCACCCTAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495556.1
CDS CCA 72 bp CATGAAGTTCTCAGTGCAAAGCTTTGGATTCTGGCTTaGCAACTTGACATTTTGGAGGGCCTAACTTTGGGA +
Preference number: 6 (lower is better)
Translates to: HEVLSAKLWILA*QLDILEGLTLG
Trigger: TCCCAAAGTTAGGCCCTCCAAAATGTCAAGTTGCCAAGCCAGAATCCAAAGCTTTGCACTGAGAACTTCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310858.10
CDS TCA 72 bp CTGGGCTATTGTGAGACTCCAATGAGACCATGTGGTTaGAAGCTCTCAGTAAAACTGTCTAAACTCTCCCAA +
Preference number: 6 (lower is better)
Translates to: LGYCETPMRPCG*KLSVKLSKLSQ
Trigger: TTGGGAGAGTTTAGACAGTTTTACTGAGAGCTTTCAACCACATGGTCTCATTGGAGTCTCACAATAGCCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492338.2
CDS CCA 72 bp AGTAGACGATGGGTTGACAGGTGCAGCAAACCACCATaGCACATATATGCCTATGTAACAAATCTGCACATT +
Preference number: 6 (lower is better)
Translates to: SRRWVDRCSKPP*HIYAYVTNLHI
Trigger: AATGTGCAGATTTGTTACATAGGCATATATGTGCCATGGTGGTTTGCTGCACCTGTCAACCCATCGTCTACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479185.1
CDS CCA 72 bp AAATACCTAATGCATGCAGAGCTTAAAAGTAGACGATaGGTTGACAGGTGCAGCAAACCACCATGGCACATA +
Preference number: 6 (lower is better)
Translates to: KYLMHAELKSRR*VDRCSKPPWHI
Trigger: TATGTGCCATGGTGGTTTGCTGCACCTGTCAACCCATCGTCTACTTTTAAGCTCTGCATGCATTAGGTATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479185.1
CDS CCA 72 bp TTAAATTGTGTTCACCCAAAACATACATCAAAGTCCTaGCCCCCAGTGCTTGTGAATTTGACCTTATTTGGA +
Preference number: 6 (lower is better)
Translates to: LNCVHPKHTSKS*PPVLVNLTLFG
Trigger: TCCAAATAAGGTCAAATTCACAAGCACTGGGGGCCAGGACTTTGATGTATGTTTTGGGTGAACACAATTTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495556.1
CDS TCA 72 bp GAGGCTTCAAGGTTATTATTAAACCAGCCTTCAGGTTaGATCACCTCAGTTCTCATAAATACACATCTTCTA +
Preference number: 6 (lower is better)
Translates to: EASRLLLNQPSG*ITSVLINTHLL
Trigger: TAGAAGATGTGTATTTATGAGAACTGAGGTGATTCAACCTGAAGGCTGGTTTAATAATAACCTTGAAGCCTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479185.1
CDS CAA 72 bp AGAGGCTTCAAGGTTATTATTAAACCAGCCTTCAGGTaGAATCACCTCAGTTCTCATAAATACACATCTTCT +
Preference number: 6 (lower is better)
Translates to: RGFKVIIKPAFR*NHLSSHKYTSS
Trigger: AGAAGATGTGTATTTATGAGAACTGAGGTGATTCAACCTGAAGGCTGGTTTAATAATAACCTTGAAGCCTCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479185.1
CDS CCA 72 bp ATGAATTCTAACTCGGCTTATACCTTGAATTTTCTCTaGCCCATAAGAAAATACAAACTCCACTTTGCCATA +
Preference number: 6 (lower is better)
Translates to: MNSNSAYTLNFL*PIRKYKLHFAI
Trigger: TATGGCAAAGTGGAGTTTGTATTTTCTTATGGGCCAGAGAAAATTCAAGGTATAAGCCGAGTTAGAATTCAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479185.1