RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TNRC6B (Homo sapiens)

Ensembl gene IDs: ENSG00000100354

Ensembl transcript IDs: ENST00000301923.13, ENST00000335727.13, ENST00000402203.5, ENST00000441751.5, ENST00000446273.1, ENST00000454349.7, ENST00000467658.1, ENST00000489500.1, ENST00000497559.1

Found 2619 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GGGATCTGGTCCCGGTGGCCACACGCATGCGGGCAGTGTGGGTGCTaGGCTGCTGGAGGAGTAGCTCTCCACTCCCTGACCTGTGTCCCC +
Preference number: 1 (lower is better)
Translates to: GIWSRWPHACGQCGC*AAGGVALHSLTCVP
Trigger: GGGGACACAGGTCAGGGAGTGGAGAGCTACTCCTCCAGCAGCTCAGCACCCACACTGCCCGCATGCGTGTGGCCACCGGGACCAGATCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR CCA 90 bp GAGAGGAGGGTGGGGCAGGACACAGCAGTGAACCAAGAGCGGCAGTaGACAGGGTCGCCACTGGCTCGCAGGAGCCTTGGGATATGCTCC +
Preference number: 1 (lower is better)
Translates to: ERRVGQDTAVNQERQ*TGSPLARRSLGICS
Trigger: GGAGCATATCCCAAGGCTCCTGCGAGCCAGTGGCGACCCTGTCCACTGCCGCTCTTGGTTCACTGCTGTGTCCTGCCCCACCCTCCTCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR CCA 90 bp ATCACTCGGGATCTGGTCCCGGTGGCCACACGCATGCGGGCAGTGTaGGTGCTGAGCTGCTGGAGGAGTAGCTCTCCACTCCCTGACCTG +
Preference number: 1 (lower is better)
Translates to: ITRDLVPVATRMRAV*VLSCWRSSSPLPDL
Trigger: CAGGTCAGGGAGTGGAGAGCTACTCCTCCAGCAGCTCAGCACCCACACTGCCCGCATGCGTGTGGCCACCGGGACCAGATCCCGAGTGAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR TCA 90 bp TCAAGGCACCCAGCGGGGCCACGTCAATGCTGCAGATGCCAAGTGTaGCCACCTACCCACAGAGGGCTCATGCAGGCTTGTATATGTGAA +
Preference number: 1 (lower is better)
Translates to: SRHPAGPRQCCRCQV*PPTHRGLMQACICE
Trigger: TTCACATATACAAGCCTGCATGAGCCCTCTGTGGGTAGGTGGTCACACTTGGCATCTGCAGCATTGACGTGGCCCCGCTGGGTGCCTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR CCA 90 bp CAGACGGAGAAAACTAGGGAATGCAGATGTGTAAACCTGCGCTCTTaGACTAACGTGGGTCTGCGTCGCCTGGGTACCTTCCCCTGTCTC +
Preference number: 1 (lower is better)
Translates to: QTEKTRECRCVNLRS*TNVGLRRLGTFPCL
Trigger: GAGACAGGGGAAGGTACCCAGGCGACGCAGACCCACGTTAGTCCAAGAGCGCAGGTTTACACATCTGCATTCCCTAGTTTTCTCCGTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR CCA 90 bp GAACCACATTGGTTGACAGGAACTGCAGGCCCCCTGGAATTTACCTaGCCATCAGACCTGCCAGCAACAGTGGCAAGAGGACTCAGAGGT +
Preference number: 1 (lower is better)
Translates to: EPHWLTGTAGPLEFT*PSDLPATVARGLRG
Trigger: ACCTCTGAGTCCTCTTGCCACTGTTGCTGGCAGGTCTGATGGCCAGGTAAATTCCAGGGGGCCTGCAGTTCCTGTCAACCAATGTGGTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR CCA 90 bp ATCACTGCATACACTTTGGTCACTGGTGTGTGCAAAGGGTGGTGGTaGGGGGAGTGTCCCAGGAAAGAAGTGCAGAGATCAGCAAAGCCC +
Preference number: 1 (lower is better)
Translates to: ITAYTLVTGVCKGWW*GECPRKEVQRSAKP
Trigger: GGGCTTTGCTGATCTCTGCACTTCTTTCCTGGGACACTCCCCCCACCACCACCCTTTGCACACACCAGTGACCAAAGTGTATGCAGTGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR GCA 90 bp GGGAGAAGGGAAGAACACAGGCACACACACAGAGACAGAGAAGGATaGACGCGAATGCACATGAACACACGTGCACACACACACCAGAAC +
Preference number: 1 (lower is better)
Translates to: GRREEHRHTHRDREG*TRMHMNTRAHTHQN
Trigger: GTTCTGGTGTGTGTGTGCACGTGTGTTCATGTGCATTCGCGTGCATCCTTCTCTGTCTCTGTGTGTGTGCCTGTGTTCTTCCCTTCTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR GCA 90 bp TGTAATGGCCGCCTCAGGACACAGACTCAAAGGGTAAAAGCGTGCTaGCCGCTCTGCACACGGCAGAAGCTGGAAAATGCCTTGTTTACA +
Preference number: 1 (lower is better)
Translates to: CNGRLRTQTQRVKAC*PLCTRQKLENALFT
Trigger: TGTAAACAAGGCATTTTCCAGCTTCTGCCGTGTGCAGAGCGGGCAGCACGCTTTTACCCTTTGAGTCTGTGTCCTGAGGCGGCCATTACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR GCA 90 bp GAATGTAATGGCCGCCTCAGGACACAGACTCAAAGGGTAAAAGCGTaGTGCCCGCTCTGCACACGGCAGAAGCTGGAAAATGCCTTGTTT +
Preference number: 1 (lower is better)
Translates to: ECNGRLRTQTQRVKA*CPLCTRQKLENALF
Trigger: AAACAAGGCATTTTCCAGCTTCTGCCGTGTGCAGAGCGGGCAGCACGCTTTTACCCTTTGAGTCTGTGTCCTGAGGCGGCCATTACATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR GCA 90 bp TGGTGGAAAAGACCCGGCACCTCCACACTCTCCACACTCGAGACTTaGAGATGCACGTGTGACGGTGCCATTCTTCGTATATGTTCTGGT +
Preference number: 1 (lower is better)
Translates to: WWKRPGTSTLSTLET*RCTCDGAILRICSG
Trigger: ACCAGAACATATACGAAGAATGGCACCGTCACACGTGCATCTGCAAGTCTCGAGTGTGGAGAGTGTGGAGGTGCCGGGTCTTTTCCACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446273.1
3UTR CCA 90 bp CGCCCAGCCAAGACAGGGTTTACATACTGGTCTGCTGTCACTGTGTaGGAGGCAATGGAGATAACACCCCTCCAACACAAATGCAAACCG +
Preference number: 1 (lower is better)
Translates to: RPAKTGFTYWSAVTV*EAMEITPLQHKCKP
Trigger: CGGTTTGCATTTGTGTTGGAGGGGTGTTATCTCCATTGCCTCCCACACAGTGACAGCAGACCAGTATGTAAACCCTGTCTTGGCTGGGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR GCA 90 bp AGTATCTTACATCTGTGGAGTGACTGGACCACACACACACACATGTaGGTCCCCCTTGCTCAGGATGTCTGGGTGTATGTACGAAGGCAC +
Preference number: 1 (lower is better)
Translates to: SILHLWSDWTTHTHM*VPLAQDVWVYVRRH
Trigger: GTGCCTTCGTACATACACCCAGACATCCTGAGCAAGGGGGACGCACATGTGTGTGTGTGTGGTCCAGTCACTCCACAGATGTAAGATACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR GCA 90 bp AAGCTCTTCTGTAGGGCTAGTCCTGGCAATAAGGCCACTCCACTTTaGCTCCAGTCAACTTTTACAGCCACCCCTCTGGGAGTTGTACAC +
Preference number: 1 (lower is better)
Translates to: KLFCRASPGNKATPL*LQSTFTATPLGVVH
Trigger: GTGTACAACTCCCAGAGGGGTGGCTGTAAAAGTTGACTGGAGGCAAAGTGGAGTGGCCTTATTGCCAGGACTAGCCCTACAGAAGAGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR GCA 90 bp AAAAGACCCGGCACCTCCACACTCTCCACACTCGAGACTTGCAGATaGACGTGTGACGGTGCCATTCTTCGTATATGTTCTGGTGCATCT +
Preference number: 1 (lower is better)
Translates to: KRPGTSTLSTLETCR*TCDGAILRICSGAS
Trigger: AGATGCACCAGAACATATACGAAGAATGGCACCGTCACACGTGCATCTGCAAGTCTCGAGTGTGGAGAGTGTGGAGGTGCCGGGTCTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446273.1
3UTR CCA 90 bp TCTGACGACTGGCCTCTGATATATACAGGACAATCCAAGCTTTGGTaGAAAAGACCCGGCACCTCCACACTCTCCACACTCGAGACTTGC +
Preference number: 1 (lower is better)
Translates to: SDDWPLIYTGQSKLW*KRPGTSTLSTLETC
Trigger: GCAAGTCTCGAGTGTGGAGAGTGTGGAGGTGCCGGGTCTTTTCCACCAAAGCTTGGATTGTCCTGTATATATCAGAGGCCAGTCGTCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446273.1
3UTR TCA 90 bp ATTAACACTGCACGGCTAGGATCAAGAATCCTGAACCACATTGGTTaGCAGGAACTGCAGGCCCCCTGGAATTTACCTGGCCATCAGACC +
Preference number: 1 (lower is better)
Translates to: INTARLGSRILNHIG*QELQAPWNLPGHQT
Trigger: GGTCTGATGGCCAGGTAAATTCCAGGGGGCCTGCAGTTCCTGTCAACCAATGTGGTTCAGGATTCTTGATCCTAGCCGTGCAGTGTTAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR CCA 90 bp CCCACTGCCTTTGGGGCCTGTCCAGAACCACTCCAATTTCCTTTATaGGTGAGTATCTTACATCTGTGGAGTGACTGGACCACACACACA +
Preference number: 1 (lower is better)
Translates to: PTAFGACPEPLQFPL*VSILHLWSDWTTHT
Trigger: TGTGTGTGTGGTCCAGTCACTCCACAGATGTAAGATACTCACCCATAAAGGAAATTGGAGTGGTTCTGGACAGGCCCCAAAGGCAGTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR CCA 90 bp GCTCCAGGTATTGTGTGGAGAACATTCTGGAGTCCCTGCAGGGGATaGATCTGCTGGAAGAGAGAAATTCAGACACTTCTTACCCTGGCA +
Preference number: 1 (lower is better)
Translates to: APGIVWRTFWSPCRG*ICWKREIQTLLTLA
Trigger: TGCCAGGGTAAGAAGTGTCTGAATTTCTCTCTTCCAGCAGATCCATCCCCTGCAGGGACTCCAGAATGTTCTCCACACAATACCTGGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR CCA 90 bp TGTGTGTGTCTGAACCAAGAAAGGTTGAGAGCTCCAGGTATTGTGTaGAGAACATTCTGGAGTCCCTGCAGGGGATGGATCTGCTGGAAG +
Preference number: 1 (lower is better)
Translates to: CVCLNQERLRAPGIV*RTFWSPCRGWICWK
Trigger: CTTCCAGCAGATCCATCCCCTGCAGGGACTCCAGAATGTTCTCCACACAATACCTGGAGCTCTCAACCTTTCTTGGTTCAGACACACACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR TCA 90 bp ACCACTCCAATTTCCTTTATGGGTGAGTATCTTACATCTGTGGAGTaGCTGGACCACACACACACACATGTGCGTCCCCCTTGCTCAGGA +
Preference number: 1 (lower is better)
Translates to: TTPISFMGEYLTSVE*LDHTHTHVRPPCSG
Trigger: TCCTGAGCAAGGGGGACGCACATGTGTGTGTGTGTGGTCCAGTCACTCCACAGATGTAAGATACTCACCCATAAAGGAAATTGGAGTGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR TCA 90 bp CTGCCTTTGGGGCCTGTCCAGAACCACTCCAATTTCCTTTATGGGTaGGTATCTTACATCTGTGGAGTGACTGGACCACACACACACACA +
Preference number: 1 (lower is better)
Translates to: LPLGPVQNHSNFLYG*VSYICGVTGPHTHT
Trigger: TGTGTGTGTGTGTGGTCCAGTCACTCCACAGATGTAAGATACTCACCCATAAAGGAAATTGGAGTGGTTCTGGACAGGCCCCAAAGGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR GCA 90 bp TCCCTTGTCCTCAATAGCAGCAAGTTACAGAGGACAGTAGAGGTCTaGTCCCACCAAGGGTTGGAATGGGCAGGTATTTGCTGGTACAAA +
Preference number: 1 (lower is better)
Translates to: SLVLNSSKLQRTVEV*SHQGLEWAGICWYK
Trigger: TTTGTACCAGCAAATACCTGCCCATTCCAACCCTTGGTGGGAGCAGACCTCTACTGTCCTCTGTAACTTGCTGCTATTGAGGACAAGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR GCA 90 bp AATGCTGCAGATGCCAAGTGTGACCACCTACCCACAGAGGGCTCATaGAGGCTTGTATATGTGAACACTCACTTGAGTCATGCCTGTCAA +
Preference number: 1 (lower is better)
Translates to: NAADAKCDHLPTEGS*RLVYVNTHLSHACQ
Trigger: TTGACAGGCATGACTCAAGTGAGTGTTCACATATACAAGCCTGCATGAGCCCTCTGTGGGTAGGTGGTCACACTTGGCATCTGCAGCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR CCA 90 bp ATGCACATGAACACACGTGCACACACACACCAGAACGAGCATGCCTaGGCAGTTACATGTGCCAGAACACACTGGTATTTATCAACCAGC +
Preference number: 1 (lower is better)
Translates to: MHMNTRAHTHQNEHA*AVTCARTHWYLSTS
Trigger: GCTGGTTGATAAATACCAGTGTGTTCTGGCACATGTAACTGCCCAGGCATGCTCGTTCTGGTGTGTGTGTGCACGTGTGTTCATGTGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR CCA 90 bp CTCCAATTTCCTTTATGGGTGAGTATCTTACATCTGTGGAGTGACTaGACCACACACACACACATGTGCGTCCCCCTTGCTCAGGATGTC +
Preference number: 1 (lower is better)
Translates to: LQFPLWVSILHLWSD*TTHTHMCVPLAQDV
Trigger: GACATCCTGAGCAAGGGGGACGCACATGTGTGTGTGTGTGGTCCAGTCACTCCACAGATGTAAGATACTCACCCATAAAGGAAATTGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR CCA 90 bp CCAGAACCACTCCAATTTCCTTTATGGGTGAGTATCTTACATCTGTaGAGTGACTGGACCACACACACACACATGTGCGTCCCCCTTGCT +
Preference number: 1 (lower is better)
Translates to: PEPLQFPLWVSILHL*SDWTTHTHMCVPLA
Trigger: AGCAAGGGGGACGCACATGTGTGTGTGTGTGGTCCAGTCACTCCACAGATGTAAGATACTCACCCATAAAGGAAATTGGAGTGGTTCTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR CCA 90 bp AATTCTGACGACTGGCCTCTGATATATACAGGACAATCCAAGCTTTaGTGGAAAAGACCCGGCACCTCCACACTCTCCACACTCGAGACT +
Preference number: 1 (lower is better)
Translates to: NSDDWPLIYTGQSKL*WKRPGTSTLSTLET
Trigger: AGTCTCGAGTGTGGAGAGTGTGGAGGTGCCGGGTCTTTTCCACCAAAGCTTGGATTGTCCTGTATATATCAGAGGCCAGTCGTCAGAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446273.1
3UTR GCA 90 bp CAAAGCCACATGAGCACAAACATACAGACGGAGAAAACTAGGGAATaGAGATGTGTAAACCTGCGCTCTTGGACTAACGTGGGTCTGCGT +
Preference number: 1 (lower is better)
Translates to: QSHMSTNIQTEKTRE*RCVNLRSWTNVGLR
Trigger: ACGCAGACCCACGTTAGTCCAAGAGCGCAGGTTTACACATCTGCATTCCCTAGTTTTCTCCGTCTGTATGTTTGTGCTCATGTGGCTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR GCA 90 bp GGTATTGTGTGGAGAACATTCTGGAGTCCCTGCAGGGGATGGATCTaGTGGAAGAGAGAAATTCAGACACTTCTTACCCTGGCACTAGAT +
Preference number: 1 (lower is better)
Translates to: GIVWRTFWSPCRGWI*WKREIQTLLTLALD
Trigger: ATCTAGTGCCAGGGTAAGAAGTGTCTGAATTTCTCTCTTCCAGCAGATCCATCCCCTGCAGGGACTCCAGAATGTTCTCCACACAATACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR GCA 90 bp AGGTTGAGAGCTCCAGGTATTGTGTGGAGAACATTCTGGAGTCCCTaGAGGGGATGGATCTGCTGGAAGAGAGAAATTCAGACACTTCTT +
Preference number: 1 (lower is better)
Translates to: RLRAPGIVWRTFWSP*RGWICWKREIQTLL
Trigger: AAGAAGTGTCTGAATTTCTCTCTTCCAGCAGATCCATCCCCTGCAGGGACTCCAGAATGTTCTCCACACAATACCTGGAGCTCTCAACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR CCA 90 bp TGGTACAAAATGTCGGCACTTTATGTTAAACAGCATAATGCAGACTaGGATGTCCACACAAGTGCTAGCACGTCACCGGCATCCATCCCC +
Preference number: 1 (lower is better)
Translates to: WYKMSALYVKQHNAD*DVHTSASTSPASIP
Trigger: GGGGATGGATGCCGGTGACGTGCTAGCACTTGTGTGGACATCCCAGTCTGCATTATGCTGTTTAACATAAAGTGCCGACATTTTGTACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR CCA 90 bp GTAATACCCTGTTTGCATCAACAGCAACGTGATGTGACGCCCATGTaGGAATGTAATGGCCGCCTCAGGACACAGACTCAAAGGGTAAAA +
Preference number: 1 (lower is better)
Translates to: VIPCLHQQQRDVTPM*ECNGRLRTQTQRVK
Trigger: TTTTACCCTTTGAGTCTGTGTCCTGAGGCGGCCATTACATTCCCACATGGGCGTCACATCACGTTGCTGTTGATGCAAACAGGGTATTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR CCA 90 bp ATTGTGTGGAGAACATTCTGGAGTCCCTGCAGGGGATGGATCTGCTaGAAGAGAGAAATTCAGACACTTCTTACCCTGGCACTAGATTGC +
Preference number: 1 (lower is better)
Translates to: IVWRTFWSPCRGWIC*KREIQTLLTLALDC
Trigger: GCAATCTAGTGCCAGGGTAAGAAGTGTCTGAATTTCTCTCTTCCAGCAGATCCATCCCCTGCAGGGACTCCAGAATGTTCTCCACACAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR CCA 90 bp CTTTTTCCAGAGAACACTGGAGCCTGTGGAGTTCCATTGCTGCACTaGATTAACACTGCACGGCTAGGATCAAGAATCCTGAACCACATT +
Preference number: 1 (lower is better)
Translates to: LFPENTGACGVPLLH*INTARLGSRILNHI
Trigger: AATGTGGTTCAGGATTCTTGATCCTAGCCGTGCAGTGTTAATCCAGTGCAGCAATGGAACTCCACAGGCTCCAGTGTTCTCTGGAAAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR GCA 90 bp TCCAAATCACTGCAGTTGTCACAATTACACACCTGGAGGAATCAATaGACAGTAATGGAGGGCACACGACACAGGAAGGAACTTGGCATT +
Preference number: 1 (lower is better)
Translates to: SKSLQLSQLHTWRNQ*TVMEGTRHRKELGI
Trigger: AATGCCAAGTTCCTTCCTGTGTCGTGTGCCCTCCATTACTGTGCATTGATTCCTCCAGGTGTGTAATTGTGACAACTGCAGTGATTTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR GCA 90 bp CTCCTCTCCCAAGTCCCAGAATCTCTTCCACTCAACTCTACACTGTaGAATATTGATGCTAATGAAATCTCAACAGCTGCTCCTGGGACT +
Preference number: 1 (lower is better)
Translates to: LLSQVPESLPLNSTL*NIDANEISTAAPGT
Trigger: AGTCCCAGGAGCAGCTGTTGAGATTTCATTAGCATCAATATTGCACAGTGTAGAGTTGAGTGGAAGAGATTCTGGGACTTGGGAGAGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR GCA 90 bp TGCCCGCTCTGCACACGGCAGAAGCTGGAAAATGCCTTGTTTACATaGATGAATGTGTCACAAGTATCACCATATTCCAATTCTCCAGTG +
Preference number: 1 (lower is better)
Translates to: CPLCTRQKLENALFT*MNVSQVSPYSNSPV
Trigger: CACTGGAGAATTGGAATATGGTGATACTTGTGACACATTCATGCATGTAAACAAGGCATTTTCCAGCTTCTGCCGTGTGCAGAGCGGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR CCA 90 bp GCTTTCATCATTAAAAAGCACTCTGTTCATCTTAATGCAGCCCAATaGAGTTGCTTTAGTAGCAGTGGCTCTCCGGGCCTGTGTGTTCTC +
Preference number: 1 (lower is better)
Translates to: AFIIKKHSVHLNAAQ*SCFSSSGSPGLCVL
Trigger: GAGAACACACAGGCCCGGAGAGCCACTGCTACTAAAGCAACTCCATTGGGCTGCATTAAGATGAACAGAGTGCTTTTTAATGATGAAAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR CCA 90 bp GTAGAGGTCTGCTCCCACCAAGGGTTGGAATGGGCAGGTATTTGCTaGTACAAAATGTCGGCACTTTATGTTAAACAGCATAATGCAGAC +
Preference number: 1 (lower is better)
Translates to: VEVCSHQGLEWAGIC*YKMSALYVKQHNAD
Trigger: GTCTGCATTATGCTGTTTAACATAAAGTGCCGACATTTTGTACCAGCAAATACCTGCCCATTCCAACCCTTGGTGGGAGCAGACCTCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR TCA 90 bp ATGGCTCTTGCCAAAGAATACCACGGAAAGAGCTCTTCTCTTCCATaGCATCCTCACCATATCCTGTTCTTAGGTCACTGCCAACCAATA +
Preference number: 1 (lower is better)
Translates to: MALAKEYHGKSSSLP*HPHHILFLGHCQPI
Trigger: TATTGGTTGGCAGTGACCTAAGAACAGGATATGGTGAGGATGTCATGGAAGAGAAGAGCTCTTTCCGTGGTATTCTTTGGCAAGAGCCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR GCA 90 bp GAGGAGACGAAGGACAAGAGCAGAACAACAGGAACCCCTTCTATTTaGCCAAGACAAAGAGACTTTCCAAATCACTGCAGTTGTCACAAT +
Preference number: 1 (lower is better)
Translates to: EETKDKSRTTGTPSI*PRQRDFPNHCSCHN
Trigger: ATTGTGACAACTGCAGTGATTTGGAAAGTCTCTTTGTCTTGGGCAAATAGAAGGGGTTCCTGTTGTTCTGCTCTTGTCCTTCGTCTCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR GCA 90 bp TGCAGAATCTTGTGCACGTGTCTCTGTGAGCACATTCACGGTGCATaGACCATTTTTGATGTCTTCTGTGAGATCACTGCATACACTTTG +
Preference number: 1 (lower is better)
Translates to: CRILCTCLCEHIHGA*TIFDVFCEITAYTL
Trigger: CAAAGTGTATGCAGTGATCTCACAGAAGACATCAAAAATGGTGCATGCACCGTGAATGTGCTCACAGAGACACGTGCACAAGATTCTGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR TCA 90 bp ATTCACATTTGCATAATAATACATTTCAAGGCCATGAGAGAGGAATaGGAGCAAAGCGCAGAAGCAGCATCTCTCCTCCCTGTGTCTTCC +
Preference number: 1 (lower is better)
Translates to: IHICIIIHFKAMREE*EQSAEAASLLPVSS
Trigger: GGAAGACACAGGGAGGAGAGATGCTGCTTCTGCGCTTTGCTCTCATTCCTCTCTCATGGCCTTGAAATGTATTATTATGCAAATGTGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR GCA 90 bp ATCATTAAAAAGCACTCTGTTCATCTTAATGCAGCCCAATGGAGTTaGTTTAGTAGCAGTGGCTCTCCGGGCCTGTGTGTTCTCATAGTT +
Preference number: 1 (lower is better)
Translates to: IIKKHSVHLNAAQWS*FSSSGSPGLCVLIV
Trigger: AACTATGAGAACACACAGGCCCGGAGAGCCACTGCTACTAAAGCAACTCCATTGGGCTGCATTAAGATGAACAGAGTGCTTTTTAATGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR GCA 90 bp TGCTGGAAGAGAGAAATTCAGACACTTCTTACCCTGGCACTAGATTaGTGGAAGAGATGGCAGCTATTTAAGACAGGGTTTTTGTGTGTG +
Preference number: 1 (lower is better)
Translates to: CWKREIQTLLTLALD*WKRWQLFKTGFLCV
Trigger: CACACACAAAAACCCTGTCTTAAATAGCTGCCATCTCTTCCAGCAATCTAGTGCCAGGGTAAGAAGTGTCTGAATTTCTCTCTTCCAGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR TCA 90 bp AACTCTTTTCCACACTTAAAGTTAGGTCATGATACTGGATCTAATTaGCAGCAGAGGTCCTCTGTCTGGTGTGAGACACCCCTTTCTCTA +
Preference number: 1 (lower is better)
Translates to: NSFPHLKLGHDTGSN*QQRSSVWCETPLSL
Trigger: TAGAGAAAGGGGTGTCTCACACCAGACAGAGGACCTCTGCTGTCAATTAGATCCAGTATCATGACCTAACTTTAAGTGTGGAAAAGAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR GCA 90 bp AGAGGGCTCATGCAGGCTTGTATATGTGAACACTCACTTGAGTCATaGCTGTCAATCTCTTTTGAGGCTAGGTTTATAATCAACAGGGTA +
Preference number: 1 (lower is better)
Translates to: RGLMQACICEHSLES*LSISFEARFIINRV
Trigger: TACCCTGTTGATTATAAACCTAGCCTCAAAAGAGATTGACAGGCATGACTCAAGTGAGTGTTCACATATACAAGCCTGCATGAGCCCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR CCA 90 bp TGGAAGAGAGAAATTCAGACACTTCTTACCCTGGCACTAGATTGCTaGAAGAGATGGCAGCTATTTAAGACAGGGTTTTTGTGTGTGTGT +
Preference number: 1 (lower is better)
Translates to: WKREIQTLLTLALDC*KRWQLFKTGFLCVC
Trigger: ACACACACACAAAAACCCTGTCTTAAATAGCTGCCATCTCTTCCAGCAATCTAGTGCCAGGGTAAGAAGTGTCTGAATTTCTCTCTTCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR TCA 90 bp CTACTTCACAAATTATTTACGTTTGGAATTCTGACGACTGGCCTCTaGTATATACAGGACAATCCAAGCTTTGGTGGAAAAGACCCGGCA +
Preference number: 1 (lower is better)
Translates to: LLHKLFTFGILTTGL*YIQDNPSFGGKDPA
Trigger: TGCCGGGTCTTTTCCACCAAAGCTTGGATTGTCCTGTATATATCAGAGGCCAGTCGTCAGAATTCCAAACGTAAATAATTTGTGAAGTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446273.1
3UTR CCA 90 bp GAATCAATGCACAGTAATGGAGGGCACACGACACAGGAAGGAACTTaGCATTCTACATTACTGAGACATAAGCATATTAACTTGCTTGAC +
Preference number: 1 (lower is better)
Translates to: ESMHSNGGHTTQEGT*HSTLLRHKHINLLD
Trigger: GTCAAGCAAGTTAATATGCTTATGTCTCAGTAATGTAGAATGCCAAGTTCCTTCCTGTGTCGTGTGCCCTCCATTACTGTGCATTGATTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR CCA 90 bp GAAATTCAGACACTTCTTACCCTGGCACTAGATTGCTGGAAGAGATaGCAGCTATTTAAGACAGGGTTTTTGTGTGTGTGTGTGTCTTTT +
Preference number: 1 (lower is better)
Translates to: EIQTLLTLALDCWKR*QLFKTGFLCVCVSF
Trigger: AAAAGACACACACACACACAAAAACCCTGTCTTAAATAGCTGCCATCTCTTCCAGCAATCTAGTGCCAGGGTAAGAAGTGTCTGAATTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR TCA 90 bp AAAGTTATCTTCCGTTCCCATTTCAAACTAACGAAAAGGCCTGCATaGAACTTAACAGATACTCAGATGTGCCTGGTGGCCATTCACTTA +
Preference number: 1 (lower is better)
Translates to: KVIFRSHFKLTKRPA*NLTDTQMCLVAIHL
Trigger: TAAGTGAATGGCCACCAGGCACATCTGAGTATCTGTTAAGTTTCATGCAGGCCTTTTCGTTAGTTTGAAATGGGAACGGAAGATAACTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR GCA 90 bp ATCAAAAGTTATCTTCCGTTCCCATTTCAAACTAACGAAAAGGCCTaGATGAAACTTAACAGATACTCAGATGTGCCTGGTGGCCATTCA +
Preference number: 1 (lower is better)
Translates to: IKSYLPFPFQTNEKA*MKLNRYSDVPGGHS
Trigger: TGAATGGCCACCAGGCACATCTGAGTATCTGTTAAGTTTCATGCAGGCCTTTTCGTTAGTTTGAAATGGGAACGGAAGATAACTTTTGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR GCA 90 bp CCATATTCAACCCACAGGAGTTTGGAAGAACCGATTGCTAACTTATaGTACATTCATGTCAGAAGAGGTGGGAAAATTCTTACAACAGGA +
Preference number: 1 (lower is better)
Translates to: PYSTHRSLEEPIANL*YIHVRRGGKILTTG
Trigger: TCCTGTTGTAAGAATTTTCCCACCTCTTCTGACATGAATGTAGCATAAGTTAGCAATCGGTTCTTCCAAACTCCTGTGGGTTGAATATGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR GCA 90 bp TCTGTTACTCGTTACAGTACTGTGAACGTCAACAAGAAGAATTGCTaGATGGAAAACACTGAATATAGGCAGAACAATCTCTCGCTTACG +
Preference number: 1 (lower is better)
Translates to: SVTRYSTVNVNKKNC*MENTEYRQNNLSLT
Trigger: CGTAAGCGAGAGATTGTTCTGCCTATATTCAGTGTTTTCCATGCAGCAATTCTTCTTGTTGACGTTCACAGTACTGTAACGAGTAACAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR GCA 90 bp ACATTTCCAGAGCATAACAAAGTGACAAGGCTATGGATTCTACAGTaGAAACCAAAATGCCAGGGACTACATCCTTCTGTGAACTACAAA +
Preference number: 1 (lower is better)
Translates to: TFPEHNKVTRLWILQ*KPKCQGLHPSVNYK
Trigger: TTTGTAGTTCACAGAAGGATGTAGTCCCTGGCATTTTGGTTTGCACTGTAGAATCCATAGCCTTGTCACTTTGTTATGCTCTGGAAATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR CCA 90 bp TTGCTTGACGTTTGTTTATTTATTTTAAATTCAGCCCACTGCCTTTaGGGCCTGTCCAGAACCACTCCAATTTCCTTTATGGGTGAGTAT +
Preference number: 1 (lower is better)
Translates to: LLDVCLFILNSAHCL*GLSRTTPISFMGEY
Trigger: ATACTCACCCATAAAGGAAATTGGAGTGGTTCTGGACAGGCCCCAAAGGCAGTGGGCTGAATTTAAAATAAATAAACAAACGTCAAGCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR TCA 90 bp ATCAAGCTTCTTCCTTCAAAGGAAGTCGTCACTATACAAGATCAGTaGGATCCAACTGAAAAGGGCTTCTTGACTAGTAAAGGGTTTATC +
Preference number: 1 (lower is better)
Translates to: IKLLPSKEVVTIQDQ*DPTEKGFLTSKGFI
Trigger: GATAAACCCTTTACTAGTCAAGAAGCCCTTTTCAGTTGGATCTCACTGATCTTGTATAGTGACGACTTCCTTTGAAGGAAGAAGCTTGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR GCA 90 bp AAGTCTGTTACTCGTTACAGTACTGTGAACGTCAACAAGAAGAATTaGTGCATGGAAAACACTGAATATAGGCAGAACAATCTCTCGCTT +
Preference number: 1 (lower is better)
Translates to: KSVTRYSTVNVNKKN*CMENTEYRQNNLSL
Trigger: AAGCGAGAGATTGTTCTGCCTATATTCAGTGTTTTCCATGCAGCAATTCTTCTTGTTGACGTTCACAGTACTGTAACGAGTAACAGACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR GCA 90 bp CATAACAAAGTGACAAGGCTATGGATTCTACAGTGCAAACCAAAATaGCAGGGACTACATCCTTCTGTGAACTACAAAATGATACTGAGT +
Preference number: 1 (lower is better)
Translates to: HNKVTRLWILQCKPK*QGLHPSVNYKMILS
Trigger: ACTCAGTATCATTTTGTAGTTCACAGAAGGATGTAGTCCCTGGCATTTTGGTTTGCACTGTAGAATCCATAGCCTTGTCACTTTGTTATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR CCA 90 bp TTTCCTCTTGCATACCTTCTATACCATATTCAACCCACAGGAGTTTaGAAGAACCGATTGCTAACTTATGCTACATTCATGTCAGAAGAG +
Preference number: 1 (lower is better)
Translates to: FPLAYLLYHIQPTGV*KNRLLTYATFMSEE
Trigger: CTCTTCTGACATGAATGTAGCATAAGTTAGCAATCGGTTCTTCCAAACTCCTGTGGGTTGAATATGGTATAGAAGGTATGCAAGAGGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR TCA 90 bp GTTTGTGAGTTCCCTATTTTCTTAACGACCATGAGGTCTGAAGACTaGCAATTCATTGTATACACACAGACCAGAATATTTTCATCCGCA +
Preference number: 1 (lower is better)
Translates to: VCEFPIFLTTMRSED*QFIVYTQTRIFSSA
Trigger: TGCGGATGAAAATATTCTGGTCTGTGTGTATACAATGAATTGTCAGTCTTCAGACCTCATGGTCGTTAAGAAAATAGGGAACTCACAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR TCA 90 bp ATGGAGGGCACACGACACAGGAAGGAACTTGGCATTCTACATTACTaGGACATAAGCATATTAACTTGCTTGACGTTTGTTTATTTATTT +
Preference number: 1 (lower is better)
Translates to: MEGTRHRKELGILHY*DISILTCLTFVYLF
Trigger: AAATAAATAAACAAACGTCAAGCAAGTTAATATGCTTATGTCTCAGTAATGTAGAATGCCAAGTTCCTTCCTGTGTCGTGTGCCCTCCAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR TCA 90 bp ACCTCTAAAGTGCCTAGTTTCTGTGTCCATGTAAAACCAGTAATATaGGGAGCAATTTCAACATATGGGAGTTTGATTAAACCTCTATGC +
Preference number: 1 (lower is better)
Translates to: TSKVPSFCVHVKPVI*GAISTYGSLIKPLC
Trigger: GCATAGAGGTTTAATCAAACTCCCATATGTTGAAATTGCTCCTCATATTACTGGTTTTACATGGACACAGAAACTAGGCACTTTAGAGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR CCA 90 bp TTACTCACTACTTCACAAATTATTTACGTTTGGAATTCTGACGACTaGCCTCTGATATATACAGGACAATCCAAGCTTTGGTGGAAAAGA +
Preference number: 1 (lower is better)
Translates to: LLTTSQIIYVWNSDD*PLIYTGQSKLWWKR
Trigger: TCTTTTCCACCAAAGCTTGGATTGTCCTGTATATATCAGAGGCCAGTCGTCAGAATTCCAAACGTAAATAATTTGTGAAGTAGTGAGTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446273.1
3UTR TCA 90 bp TCAAACCTGATCATAAGGAAAGAGGGAACAAAGTTTCTCTGTTTTTaGGACATCGCATCATCAAAAGTTATCTTCCGTTCCCATTTCAAA +
Preference number: 1 (lower is better)
Translates to: SNLIIRKEGTKFLCF*DIASSKVIFRSHFK
Trigger: TTTGAAATGGGAACGGAAGATAACTTTTGATGATGCGATGTCTCAAAAACAGAGAAACTTTGTTCCCTCTTTCCTTATGATCAGGTTTGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR TCA 90 bp TTAGAATTTACTCACTACTTCACAAATTATTTACGTTTGGAATTCTaGCGACTGGCCTCTGATATATACAGGACAATCCAAGCTTTGGTG +
Preference number: 1 (lower is better)
Translates to: LEFTHYFTNYLRLEF*RLASDIYRTIQALV
Trigger: CACCAAAGCTTGGATTGTCCTGTATATATCAGAGGCCAGTCGTCAGAATTCCAAACGTAAATAATTTGTGAAGTAGTGAGTAAATTCTAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446273.1
3UTR-3UTR TCA 90 bp GATCTGGTCCCGGTGGCCACACGCATGCGGGCAGTGTGGGTGCTGAGCTGCTGGCATGCTTGGGAATTCTaGCCCCTGGCCCCAGGAGGG +
Preference number: 2 (lower is better)
Translates to: DLVPVATRMRAVWVLSCWHAWEF*PLAPGG
Trigger: CCCTCCTGGGGCCAGGGGTCAGAATTCCCAAGCATG...CCAGCAGCTCAGCACCCACACTGCCCGCATGCGTGTGGCCACCGGGACCAGATC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR CCA 90 bp GATCTGGTCCCGGTGGCCACACGCATGCGGGCAGTGTGGGTGCTGAGCTGCTGGCTGTCAGTGATGGCCTaGTGCTGTAACGCGCCACGG +
Preference number: 2 (lower is better)
Translates to: DLVPVATRMRAVWVLSCWLSVMA*CCNAPR
Trigger: CCGTGGCGCGTTACAGCACCAGGCCATCACTGACAG...CCAGCAGCTCAGCACCCACACTGCCCGCATGCGTGTGGCCACCGGGACCAGATC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR CCA 90 bp GATCTGGTCCCGGTGGCCACACGCATGCGGGCAGTGTGGGTGCTGAGCTGCTGGCTGCTCTTCACCTGGTaGTCACCGCACGACAGCACT +
Preference number: 2 (lower is better)
Translates to: DLVPVATRMRAVWVLSCWLLFTW*SPHDST
Trigger: AGTGCTGTCGTGCGGTGACCACCAGGTGAAGAGCAG...CCAGCAGCTCAGCACCCACACTGCCCGCATGCGTGTGGCCACCGGGACCAGATC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR GCA 90 bp GTATGCCACAATCACTCGGGATCTGGTCCCGGTGGCCACACGCATGCGGGCAGTAGCAGGAAGAGGGCATaGTCAAGGCACCCAGCGGGG +
Preference number: 2 (lower is better)
Translates to: VCHNHSGSGPGGHTHAGSSRKRA*SRHPAG
Trigger: CCCCGCTGGGTGCCTTGAGCATGCCCTCTTCCTGCT...ACTGCCCGCATGCGTGTGGCCACCGGGACCAGATCCCGAGTGATTGTGGCATAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR TCA 90 bp ATGCGGGCAGTGTGGGTGCTGAGCTGCTGGAGGAGTAGCTCTCCACTCCCTGACGGCAGGACACAGCAGTaGACCAAGAGCGGCAGTGGA +
Preference number: 2 (lower is better)
Translates to: MRAVWVLSCWRSSSPLPDGRTQQ*TKSGSG
Trigger: TCCACTGCCGCTCTTGGTTCACTGCTGTGTCCTGCC...GTCAGGGAGTGGAGAGCTACTCCTCCAGCAGCTCAGCACCCACACTGCCCGCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR GCA 90 bp GTATGCCACAATCACTCGGGATCTGGTCCCGGTGGCCACACGCATGCGGGCAGTTCAGTGATGGCCTGGTaGTGTAACGCGCCACGGCCT +
Preference number: 2 (lower is better)
Translates to: VCHNHSGSGPGGHTHAGSSVMAW*CNAPRP
Trigger: AGGCCGTGGCGCGTTACAGCACCAGGCCATCACTGA...ACTGCCCGCATGCGTGTGGCCACCGGGACCAGATCCCGAGTGATTGTGGCATAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR GCA 90 bp GTATGCCACAATCACTCGGGATCTGGTCCCGGTGGCCACACGCATGCGGGCAGTGCGGTCAGTGGGGGCTaGTGGAAGCAGAGCTTTTGC +
Preference number: 2 (lower is better)
Translates to: VCHNHSGSGPGGHTHAGSAVSGG*WKQSFC
Trigger: GCAAAAGCTCTGCTTCCAGCAGCCCCCACTGACCGC...ACTGCCCGCATGCGTGTGGCCACCGGGACCAGATCCCGAGTGATTGTGGCATAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR CCA 90 bp GTATGCCACAATCACTCGGGATCTGGTCCCGGTGGCCACACGCATGCGGGCAGTCTGTCAGTGATGGCCTaGTGCTGTAACGCGCCACGG +
Preference number: 2 (lower is better)
Translates to: VCHNHSGSGPGGHTHAGSLSVMA*CCNAPR
Trigger: CCGTGGCGCGTTACAGCACCAGGCCATCACTGACAG...ACTGCCCGCATGCGTGTGGCCACCGGGACCAGATCCCGAGTGATTGTGGCATAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR CCA 90 bp GATCTGGTCCCGGTGGCCACACGCATGCGGGCAGTGTGGGTGCTGAGCTGCTGGGCTCCCACCAAGGGTTaGAATGGGCAGGTATTTGCT +
Preference number: 2 (lower is better)
Translates to: DLVPVATRMRAVWVLSCWAPTKG*NGQVFA
Trigger: AGCAAATACCTGCCCATTCCAACCCTTGGTGGGAGC...CCAGCAGCTCAGCACCCACACTGCCCGCATGCGTGTGGCCACCGGGACCAGATC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR CCA 90 bp ATGCGGGCAGTGTGGGTGCTGAGCTGCTGGAGGAGTAGCTCTCCACTCCCTGACAACCAAGAGCGGCAGTaGACAGGGTCGCCACTGGCT +
Preference number: 2 (lower is better)
Translates to: MRAVWVLSCWRSSSPLPDNQERQ*TGSPLA
Trigger: AGCCAGTGGCGACCCTGTCCACTGCCGCTCTTGGTT...GTCAGGGAGTGGAGAGCTACTCCTCCAGCAGCTCAGCACCCACACTGCCCGCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR CCA 90 bp CAAAGGGTAAAAGCGTGCTGCCCGCTCTGCACACGGCAGAAGCTGGAAAATGCCGGGATCTGGTCCCGGTaGCCACACGCATGCGGGCAG +
Preference number: 2 (lower is better)
Translates to: QRVKACCPLCTRQKLENAGIWSR*PHACGQ
Trigger: CTGCCCGCATGCGTGTGGCCACCGGGACCAGATCCC...GGCATTTTCCAGCTTCTGCCGTGTGCAGAGCGGGCAGCACGCTTTTACCCTTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR GCA 90 bp GATCTGGTCCCGGTGGCCACACGCATGCGGGCAGTGTGGGTGCTGAGCTGCTGGGCAGACTGTCAGCGATaGAGCTTTCTGAGAAGTCAG +
Preference number: 2 (lower is better)
Translates to: DLVPVATRMRAVWVLSCWADCQR*SFLRSQ
Trigger: CTGACTTCTCAGAAAGCTGCATCGCTGACAGTCTGC...CCAGCAGCTCAGCACCCACACTGCCCGCATGCGTGTGGCCACCGGGACCAGATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR GCA 90 bp GATCTGGTCCCGGTGGCCACACGCATGCGGGCAGTGTGGGTGCTGAGCTGCTGGTGGAAGCAGAGCTTTTaGATGGGGAACAGTGGTGGA +
Preference number: 2 (lower is better)
Translates to: DLVPVATRMRAVWVLSCWWKQSF*MGNSGG
Trigger: TCCACCACTGTTCCCCATGCAAAAGCTCTGCTTCCA...CCAGCAGCTCAGCACCCACACTGCCCGCATGCGTGTGGCCACCGGGACCAGATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR CCA 90 bp ATGCGGGCAGTGTGGGTGCTGAGCTGCTGGAGGAGTAGCTCTCCACTCCCTGACAAGCTGCTCTTCACCTaGTGGTCACCGCACGACAGC +
Preference number: 2 (lower is better)
Translates to: MRAVWVLSCWRSSSPLPDKLLFT*WSPHDS
Trigger: GCTGTCGTGCGGTGACCACCAGGTGAAGAGCAGCTT...GTCAGGGAGTGGAGAGCTACTCCTCCAGCAGCTCAGCACCCACACTGCCCGCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR CCA 90 bp GATCTGGTCCCGGTGGCCACACGCATGCGGGCAGTGTGGGTGCTGAGCTGCTGGCCTTTCTTTTGTTGCTaGGGTTGTGGGGACAAGGAG +
Preference number: 2 (lower is better)
Translates to: DLVPVATRMRAVWVLSCWPFFCC*GCGDKE
Trigger: CTCCTTGTCCCCACAACCCCAGCAACAAAAGAAAGG...CCAGCAGCTCAGCACCCACACTGCCCGCATGCGTGTGGCCACCGGGACCAGATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR CCA 90 bp ATGCGGGCAGTGTGGGTGCTGAGCTGCTGGAGGAGTAGCTCTCCACTCCCTGACTCAGCCCACTGCCTTTaGGGCCTGTCCAGAACCACT +
Preference number: 2 (lower is better)
Translates to: MRAVWVLSCWRSSSPLPDSAHCL*GLSRTT
Trigger: AGTGGTTCTGGACAGGCCCCAAAGGCAGTGGGCTGA...GTCAGGGAGTGGAGAGCTACTCCTCCAGCAGCTCAGCACCCACACTGCCCGCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR GCA 90 bp GATCTGGTCCCGGTGGCCACACGCATGCGGGCAGTGTGGGTGCTGAGCTGCTGGAGGGAGGCAACTATGTaGTCAGACAGTCTGTCAATG +
Preference number: 2 (lower is better)
Translates to: DLVPVATRMRAVWVLSCWREATM*SDSLSM
Trigger: CATTGACAGACTGTCTGAGCACATAGTTGCCTCCCT...CCAGCAGCTCAGCACCCACACTGCCCGCATGCGTGTGGCCACCGGGACCAGATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR GCA 90 bp GATCTGGTCCCGGTGGCCACACGCATGCGGGCAGTGTGGGTGCTGAGCTGCTGGTTTTGGACTTGGCAGTaGTCCACTCTACTGCTAGGT +
Preference number: 2 (lower is better)
Translates to: DLVPVATRMRAVWVLSCWFWTWQ*STLLLG
Trigger: ACCTAGCAGTAGAGTGGAGCACTGCCAAGTCCAAAA...CCAGCAGCTCAGCACCCACACTGCCCGCATGCGTGTGGCCACCGGGACCAGATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR GCA 90 bp ATGCGGGCAGTGTGGGTGCTGAGCTGCTGGAGGAGTAGCTCTCCACTCCCTGACCATGTGCGTCCCCCTTaGTCAGGATGTCTGGGTGTA +
Preference number: 2 (lower is better)
Translates to: MRAVWVLSCWRSSSPLPDHVRPP*SGCLGV
Trigger: TACACCCAGACATCCTGAGCAAGGGGGACGCACATG...GTCAGGGAGTGGAGAGCTACTCCTCCAGCAGCTCAGCACCCACACTGCCCGCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR GCA 90 bp GATCTGGTCCCGGTGGCCACACGCATGCGGGCAGTGTGGGTGCTGAGCTGCTGGACCTGGAGGAATCAATaGACAGTAATGGAGGGCACA +
Preference number: 2 (lower is better)
Translates to: DLVPVATRMRAVWVLSCWTWRNQ*TVMEGT
Trigger: TGTGCCCTCCATTACTGTGCATTGATTCCTCCAGGT...CCAGCAGCTCAGCACCCACACTGCCCGCATGCGTGTGGCCACCGGGACCAGATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR GCA 90 bp AACTGCAGGCCCCCTGGAATTTACCTGGCCATCAGACCTGCCAGCAACAGTGGCAGGGTAAAAGCGTGCTaGCCGCTCTGCACACGGCAG +
Preference number: 2 (lower is better)
Translates to: NCRPPGIYLAIRPASNSGRVKAC*PLCTRQ
Trigger: CTGCCGTGTGCAGAGCGGGCAGCACGCTTTTACCCT...GCCACTGTTGCTGGCAGGTCTGATGGCCAGGTAAATTCCAGGGGGCCTGCAGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR CCA 90 bp ATGCGGGCAGTGTGGGTGCTGAGCTGCTGGAGGAGTAGCTCTCCACTCCCTGACGGGAATTCTGACCCCTaGCCCCAGGAGGGAATACAA +
Preference number: 2 (lower is better)
Translates to: MRAVWVLSCWRSSSPLPDGNSDP*PQEGIQ
Trigger: TTGTATTCCCTCCTGGGGCCAGGGGTCAGAATTCCC...GTCAGGGAGTGGAGAGCTACTCCTCCAGCAGCTCAGCACCCACACTGCCCGCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR CAA 90 bp ACCAAGAGCGGCAGTGGACAGGGTCGCCACTGGCTCGCAGGAGCCTaGGGATATGCTCCTGGCCCAGGGACACTAAGATTTAACCTTCTC +
Preference number: 2 (lower is better)
Translates to: TKSGSGQGRHWLAGA*GYAPGPGTLRFNLL
Trigger: GAGAAGGTTAAATCTTAGTGTCCCTGGGCCAGGAGCATATCCCAAGGCTCCTGCGAGCCAGTGGCGACCCTGTCCACTGCCGCTCTTGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR TCA 90 bp CAAAGGGTAAAAGCGTGCTGCCCGCTCTGCACACGGCAGAAGCTGGAAAATGCCGGCAGGACACAGCAGTaGACCAAGAGCGGCAGTGGA +
Preference number: 2 (lower is better)
Translates to: QRVKACCPLCTRQKLENAGRTQQ*TKSGSG
Trigger: TCCACTGCCGCTCTTGGTTCACTGCTGTGTCCTGCC...GGCATTTTCCAGCTTCTGCCGTGTGCAGAGCGGGCAGCACGCTTTTACCCTTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR GCA 90 bp GATCTGGTCCCGGTGGCCACACGCATGCGGGCAGTGTGGGTGCTGAGCTGCTGGCTGGGCAGTTACATGTaGCAGAACACACTGGTATTT +
Preference number: 2 (lower is better)
Translates to: DLVPVATRMRAVWVLSCWLGSYM*QNTLVF
Trigger: AAATACCAGTGTGTTCTGGCACATGTAACTGCCCAG...CCAGCAGCTCAGCACCCACACTGCCCGCATGCGTGTGGCCACCGGGACCAGATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR GCA 90 bp ATGCGGGCAGTGTGGGTGCTGAGCTGCTGGAGGAGTAGCTCTCCACTCCCTGACACACCAGAACGAGCATaGCTGGGCAGTTACATGTGC +
Preference number: 2 (lower is better)
Translates to: MRAVWVLSCWRSSSPLPDTPERA*LGSYMC
Trigger: GCACATGTAACTGCCCAGGCATGCTCGTTCTGGTGT...GTCAGGGAGTGGAGAGCTACTCCTCCAGCAGCTCAGCACCCACACTGCCCGCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR GCA 90 bp GATCTGGTCCCGGTGGCCACACGCATGCGGGCAGTGTGGGTGCTGAGCTGCTGGCGCCCCCTTCAGGTCTaGTATAATTCTCTTCACAAT +
Preference number: 2 (lower is better)
Translates to: DLVPVATRMRAVWVLSCWRPLQV*YNSLHN
Trigger: ATTGTGAAGAGAATTATAGCAGACCTGAAGGGGGCG...CCAGCAGCTCAGCACCCACACTGCCCGCATGCGTGTGGCCACCGGGACCAGATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR GCA 90 bp ATGCGGGCAGTGTGGGTGCTGAGCTGCTGGAGGAGTAGCTCTCCACTCCCTGACAGGACAGTAGAGGTCTaGTCCCACCAAGGGTTGGAA +
Preference number: 2 (lower is better)
Translates to: MRAVWVLSCWRSSSPLPDRTVEV*SHQGLE
Trigger: TTCCAACCCTTGGTGGGAGCAGACCTCTACTGTCCT...GTCAGGGAGTGGAGAGCTACTCCTCCAGCAGCTCAGCACCCACACTGCCCGCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR GCA 90 bp GTATGCCACAATCACTCGGGATCTGGTCCCGGTGGCCACACGCATGCGGGCAGTAGGACAGTAGAGGTCTaGTCCCACCAAGGGTTGGAA +
Preference number: 2 (lower is better)
Translates to: VCHNHSGSGPGGHTHAGSRTVEV*SHQGLE
Trigger: TTCCAACCCTTGGTGGGAGCAGACCTCTACTGTCCT...ACTGCCCGCATGCGTGTGGCCACCGGGACCAGATCCCGAGTGATTGTGGCATAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR GCA 90 bp GTATGCCACAATCACTCGGGATCTGGTCCCGGTGGCCACACGCATGCGGGCAGTACACACACACACATGTaGGTCCCCCTTGCTCAGGAT +
Preference number: 2 (lower is better)
Translates to: VCHNHSGSGPGGHTHAGSTHTHM*VPLAQD
Trigger: ATCCTGAGCAAGGGGGACGCACATGTGTGTGTGTGT...ACTGCCCGCATGCGTGTGGCCACCGGGACCAGATCCCGAGTGATTGTGGCATAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR CCA 90 bp ATGCGGGCAGTGTGGGTGCTGAGCTGCTGGAGGAGTAGCTCTCCACTCCCTGACCAGAACGAGCATGCCTaGGCAGTTACATGTGCCAGA +
Preference number: 2 (lower is better)
Translates to: MRAVWVLSCWRSSSPLPDQNEHA*AVTCAR
Trigger: TCTGGCACATGTAACTGCCCAGGCATGCTCGTTCTG...GTCAGGGAGTGGAGAGCTACTCCTCCAGCAGCTCAGCACCCACACTGCCCGCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR CCA 90 bp AATGAAGCTGAAGGAATCGAGTGGGAGGGACTGTTCTCCTCTTTGGGGGAGCTCGGACAGGGTCGCCACTaGCTCGCAGGAGCCTTGGGA +
Preference number: 2 (lower is better)
Translates to: NEAEGIEWEGLFSSLGELGQGRH*LAGALG
Trigger: TCCCAAGGCTCCTGCGAGCCAGTGGCGACCCTGTCC...GAGCTCCCCCAAAGAGGAGAACAGTCCCTCCCACTCGATTCCTTCAGCTTCATT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR CCA 90 bp AACTGCAGGCCCCCTGGAATTTACCTGGCCATCAGACCTGCCAGCAACAGTGGCTCAGCCCACTGCCTTTaGGGCCTGTCCAGAACCACT +
Preference number: 2 (lower is better)
Translates to: NCRPPGIYLAIRPASNSGSAHCL*GLSRTT
Trigger: AGTGGTTCTGGACAGGCCCCAAAGGCAGTGGGCTGA...GCCACTGTTGCTGGCAGGTCTGATGGCCAGGTAAATTCCAGGGGGCCTGCAGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR TCA 90 bp AACTGCAGGCCCCCTGGAATTTACCTGGCCATCAGACCTGCCAGCAACAGTGGCGAAGGGGCACGGTGGTaGTTCAAATTGCAGAGCAGG +
Preference number: 2 (lower is better)
Translates to: NCRPPGIYLAIRPASNSGEGARW*FKLQSR
Trigger: CCTGCTCTGCAATTTGAATCACCACCGTGCCCCTTC...GCCACTGTTGCTGGCAGGTCTGATGGCCAGGTAAATTCCAGGGGGCCTGCAGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR TCA 90 bp ATGCGGGCAGTGTGGGTGCTGAGCTGCTGGAGGAGTAGCTCTCCACTCCCTGACCTTACATCTGTGGAGTaGCTGGACCACACACACACA +
Preference number: 2 (lower is better)
Translates to: MRAVWVLSCWRSSSPLPDLTSVE*LDHTHT
Trigger: TGTGTGTGTGTGGTCCAGTCACTCCACAGATGTAAG...GTCAGGGAGTGGAGAGCTACTCCTCCAGCAGCTCAGCACCCACACTGCCCGCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR TCA 90 bp ATGCGGGCAGTGTGGGTGCTGAGCTGCTGGAGGAGTAGCTCTCCACTCCCTGACGTCCTCTGTCTGGTGTaGGACACCCCTTTCTCTATT +
Preference number: 2 (lower is better)
Translates to: MRAVWVLSCWRSSSPLPDVLCLV*DTPFSI
Trigger: AATAGAGAAAGGGGTGTCTCACACCAGACAGAGGAC...GTCAGGGAGTGGAGAGCTACTCCTCCAGCAGCTCAGCACCCACACTGCCCGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR TCA 90 bp CCCCTGTCTCCTCTCCCAAGTCCCAGAATCTCTTCCACTCAACTCTACACTGTGGGGCAGTGTGGGTGCTaGGCTGCTGGAGGAGTAGCT +
Preference number: 2 (lower is better)
Translates to: PLSPLPSPRISSTQLYTVGQCGC*AAGGVA
Trigger: AGCTACTCCTCCAGCAGCTCAGCACCCACACTGCCC...CACAGTGTAGAGTTGAGTGGAAGAGATTCTGGGACTTGGGAGAGGAGACAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR GCA 90 bp ATGCGGGCAGTGTGGGTGCTGAGCTGCTGGAGGAGTAGCTCTCCACTCCCTGACGCAGACTGTCAGCGATaGAGCTTTCTGAGAAGTCAG +
Preference number: 2 (lower is better)
Translates to: MRAVWVLSCWRSSSPLPDADCQR*SFLRSQ
Trigger: CTGACTTCTCAGAAAGCTGCATCGCTGACAGTCTGC...GTCAGGGAGTGGAGAGCTACTCCTCCAGCAGCTCAGCACCCACACTGCCCGCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR GCA 90 bp GATCTGGTCCCGGTGGCCACACGCATGCGGGCAGTGTGGGTGCTGAGCTGCTGGCACTCACTTGAGTCATaGCTGTCAATCTCTTTTGAG +
Preference number: 2 (lower is better)
Translates to: DLVPVATRMRAVWVLSCWHSLES*LSISFE
Trigger: CTCAAAAGAGATTGACAGGCATGACTCAAGTGAGTG...CCAGCAGCTCAGCACCCACACTGCCCGCATGCGTGTGGCCACCGGGACCAGATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR GCA 90 bp CCCCTGTCTCCTCTCCCAAGTCCCAGAATCTCTTCCACTCAACTCTACACTGTGAGCAGGAAGAGGGCATaGTCAAGGCACCCAGCGGGG +
Preference number: 2 (lower is better)
Translates to: PLSPLPSPRISSTQLYTVSRKRA*SRHPAG
Trigger: CCCCGCTGGGTGCCTTGAGCATGCCCTCTTCCTGCT...CACAGTGTAGAGTTGAGTGGAAGAGATTCTGGGACTTGGGAGAGGAGACAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR GCA 90 bp ATGCGGGCAGTGTGGGTGCTGAGCTGCTGGAGGAGTAGCTCTCCACTCCCTGACTGGAAGCAGAGCTTTTaGATGGGGAACAGTGGTGGA +
Preference number: 2 (lower is better)
Translates to: MRAVWVLSCWRSSSPLPDWKQSF*MGNSGG
Trigger: TCCACCACTGTTCCCCATGCAAAAGCTCTGCTTCCA...GTCAGGGAGTGGAGAGCTACTCCTCCAGCAGCTCAGCACCCACACTGCCCGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR GCA 90 bp GATCTGGTCCCGGTGGCCACACGCATGCGGGCAGTGTGGGTGCTGAGCTGCTGGGGAACCCCTTCTATTTaGCCAAGACAAAGAGACTTT +
Preference number: 2 (lower is better)
Translates to: DLVPVATRMRAVWVLSCWGTPSI*PRQRDF
Trigger: AAAGTCTCTTTGTCTTGGGCAAATAGAAGGGGTTCC...CCAGCAGCTCAGCACCCACACTGCCCGCATGCGTGTGGCCACCGGGACCAGATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR GCA 90 bp GATCTGGTCCCGGTGGCCACACGCATGCGGGCAGTGTGGGTGCTGAGCTGCTGGAGTAGACATGGCTCTTaGCAAAGAATACCACGGAAA +
Preference number: 2 (lower is better)
Translates to: DLVPVATRMRAVWVLSCWSRHGS*QRIPRK
Trigger: TTTCCGTGGTATTCTTTGGCAAGAGCCATGTCTACT...CCAGCAGCTCAGCACCCACACTGCCCGCATGCGTGTGGCCACCGGGACCAGATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR CCA 90 bp ATGCGGGCAGTGTGGGTGCTGAGCTGCTGGAGGAGTAGCTCTCCACTCCCTGACCACCAAGGGTTGGAATaGGCAGGTATTTGCTGGTAC +
Preference number: 2 (lower is better)
Translates to: MRAVWVLSCWRSSSPLPDHQGLE*AGICWY
Trigger: GTACCAGCAAATACCTGCCCATTCCAACCCTTGGTG...GTCAGGGAGTGGAGAGCTACTCCTCCAGCAGCTCAGCACCCACACTGCCCGCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR CCA 90 bp GTATGCCACAATCACTCGGGATCTGGTCCCGGTGGCCACACGCATGCGGGCAGTCCTTTCTTTTGTTGCTaGGGTTGTGGGGACAAGGAG +
Preference number: 2 (lower is better)
Translates to: VCHNHSGSGPGGHTHAGSPFFCC*GCGDKE
Trigger: CTCCTTGTCCCCACAACCCCAGCAACAAAAGAAAGG...ACTGCCCGCATGCGTGTGGCCACCGGGACCAGATCCCGAGTGATTGTGGCATAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR CCA 90 bp GTATGCCACAATCACTCGGGATCTGGTCCCGGTGGCCACACGCATGCGGGCAGTCATCTGTGGAGTGACTaGACCACACACACACACATG +
Preference number: 2 (lower is better)
Translates to: VCHNHSGSGPGGHTHAGSHLWSD*TTHTHM
Trigger: CATGTGTGTGTGTGTGGTCCAGTCACTCCACAGATG...ACTGCCCGCATGCGTGTGGCCACCGGGACCAGATCCCGAGTGATTGTGGCATAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR TCA 90 bp GATCTGGTCCCGGTGGCCACACGCATGCGGGCAGTGTGGGTGCTGAGCTGCTGGCTAGGTTGGCGTTCATaGTTCAAGTATTTCAAGAGT +
Preference number: 2 (lower is better)
Translates to: DLVPVATRMRAVWVLSCWLGWRS*FKYFKS
Trigger: ACTCTTGAAATACTTGAATCATGAACGCCAACCTAG...CCAGCAGCTCAGCACCCACACTGCCCGCATGCGTGTGGCCACCGGGACCAGATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR TCA 90 bp ACTTTCAGGTCAGCACGAGTGAAGCGTGGTTTCCTGAGCTTGAAGGGCTCTGAACATGCTTGGGAATTCTaGCCCCTGGCCCCAGGAGGG +
Preference number: 2 (lower is better)
Translates to: TFRSARVKRGFLSLKGSEHAWEF*PLAPGG
Trigger: CCCTCCTGGGGCCAGGGGTCAGAATTCCCAAGCATG...TTCAGAGCCCTTCAAGCTCAGGAAACCACGCTTCACTCGTGCTGACCTGAAAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR TCA 90 bp GATCTGGTCCCGGTGGCCACACGCATGCGGGCAGTGTGGGTGCTGAGCTGCTGGATCAGAGATGTTACATaGGCCATCCATTTCTTCACA +
Preference number: 2 (lower is better)
Translates to: DLVPVATRMRAVWVLSCWIRDVT*AIHFFT
Trigger: TGTGAAGAAATGGATGGCTCATGTAACATCTCTGAT...CCAGCAGCTCAGCACCCACACTGCCCGCATGCGTGTGGCCACCGGGACCAGATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR TCA 90 bp ATGCGGGCAGTGTGGGTGCTGAGCTGCTGGAGGAGTAGCTCTCCACTCCCTGACGCGCAGCAGGGTTTGTaGGTTCCCTATTTTCTTAAC +
Preference number: 2 (lower is better)
Translates to: MRAVWVLSCWRSSSPLPDAQQGL*VPYFLN
Trigger: GTTAAGAAAATAGGGAACTCACAAACCCTGCTGCGC...GTCAGGGAGTGGAGAGCTACTCCTCCAGCAGCTCAGCACCCACACTGCCCGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR TCA 90 bp AACTTTTACAGCCACCCCTCTGGGAGTTGTACACACCTTTCAGTAGCCGAAGGGGGGCAGTGTGGGTGCTaGGCTGCTGGAGGAGTAGCT +
Preference number: 2 (lower is better)
Translates to: NFYSHPSGSCTHLSVAEGGQCGC*AAGGVA
Trigger: AGCTACTCCTCCAGCAGCTCAGCACCCACACTGCCC...CCCTTCGGCTACTGAAAGGTGTGTACAACTCCCAGAGGGGTGGCTGTAAAAGTT
57% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR GCA 90 bp GTATGCCACAATCACTCGGGATCTGGTCCCGGTGGCCACACGCATGCGGGCAGTAGAGACAGAGAAGGATaGACGCGAATGCACATGAAC +
Preference number: 2 (lower is better)
Translates to: VCHNHSGSGPGGHTHAGSRDREG*TRMHMN
Trigger: GTTCATGTGCATTCGCGTGCATCCTTCTCTGTCTCT...ACTGCCCGCATGCGTGTGGCCACCGGGACCAGATCCCGAGTGATTGTGGCATAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR GCA 90 bp CCCCTGTCTCCTCTCCCAAGTCCCAGAATCTCTTCCACTCAACTCTACACTGTGTCAGTGATGGCCTGGTaGTGTAACGCGCCACGGCCT +
Preference number: 2 (lower is better)
Translates to: PLSPLPSPRISSTQLYTVSVMAW*CNAPRP
Trigger: AGGCCGTGGCGCGTTACAGCACCAGGCCATCACTGA...CACAGTGTAGAGTTGAGTGGAAGAGATTCTGGGACTTGGGAGAGGAGACAGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR GCA 90 bp GATCTGGTCCCGGTGGCCACACGCATGCGGGCAGTGTGGGTGCTGAGCTGCTGGTCGCTAAGTTATACCTaGCTAAGCAAAACCACATAC +
Preference number: 2 (lower is better)
Translates to: DLVPVATRMRAVWVLSCWSLSYT*LSKTTY
Trigger: GTATGTGGTTTTGCTTAGGCAGGTATAACTTAGCGA...CCAGCAGCTCAGCACCCACACTGCCCGCATGCGTGTGGCCACCGGGACCAGATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR GCA 90 bp AATGAAGCTGAAGGAATCGAGTGGGAGGGACTGTTCTCCTCTTTGGGGGAGCTCGCGGTCAGTGGGGGCTaGTGGAAGCAGAGCTTTTGC +
Preference number: 2 (lower is better)
Translates to: NEAEGIEWEGLFSSLGELAVSGG*WKQSFC
Trigger: GCAAAAGCTCTGCTTCCAGCAGCCCCCACTGACCGC...GAGCTCCCCCAAAGAGGAGAACAGTCCCTCCCACTCGATTCCTTCAGCTTCATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR GCA 90 bp GTATGCCACAATCACTCGGGATCTGGTCCCGGTGGCCACACGCATGCGGGCAGTGCAAGCCTGTATCTATaGCAGAGTGTGGTAGAAGAG +
Preference number: 2 (lower is better)
Translates to: VCHNHSGSGPGGHTHAGSASLYL*QSVVEE
Trigger: CTCTTCTACCACACTCTGGCATAGATACAGGCTTGC...ACTGCCCGCATGCGTGTGGCCACCGGGACCAGATCCCGAGTGATTGTGGCATAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR GCA 90 bp AATGAAGCTGAAGGAATCGAGTGGGAGGGACTGTTCTCCTCTTTGGGGGAGCTCAGGGTAAAAGCGTGCTaGCCGCTCTGCACACGGCAG +
Preference number: 2 (lower is better)
Translates to: NEAEGIEWEGLFSSLGELRVKAC*PLCTRQ
Trigger: CTGCCGTGTGCAGAGCGGGCAGCACGCTTTTACCCT...GAGCTCCCCCAAAGAGGAGAACAGTCCCTCCCACTCGATTCCTTCAGCTTCATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR CCA 90 bp AATGAAGCTGAAGGAATCGAGTGGGAGGGACTGTTCTCCTCTTTGGGGGAGCTCCTGTCAGTGATGGCCTaGTGCTGTAACGCGCCACGG +
Preference number: 2 (lower is better)
Translates to: NEAEGIEWEGLFSSLGELLSVMA*CCNAPR
Trigger: CCGTGGCGCGTTACAGCACCAGGCCATCACTGACAG...GAGCTCCCCCAAAGAGGAGAACAGTCCCTCCCACTCGATTCCTTCAGCTTCATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR CCA 90 bp ATGCGGGCAGTGTGGGTGCTGAGCTGCTGGAGGAGTAGCTCTCCACTCCCTGACCAGCATAATGCAGACTaGGATGTCCACACAAGTGCT +
Preference number: 2 (lower is better)
Translates to: MRAVWVLSCWRSSSPLPDQHNAD*DVHTSA
Trigger: AGCACTTGTGTGGACATCCCAGTCTGCATTATGCTG...GTCAGGGAGTGGAGAGCTACTCCTCCAGCAGCTCAGCACCCACACTGCCCGCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR CCA 90 bp GATCTGGTCCCGGTGGCCACACGCATGCGGGCAGTGTGGGTGCTGAGCTGCTGGCATCTGAGGTCAAAATaGAATCTGGCTGTTAACCTT +
Preference number: 2 (lower is better)
Translates to: DLVPVATRMRAVWVLSCWHLRSK*NLAVNL
Trigger: AAGGTTAACAGCCAGATTCCATTTTGACCTCAGATG...CCAGCAGCTCAGCACCCACACTGCCCGCATGCGTGTGGCCACCGGGACCAGATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR CCA 90 bp ACTTTCAGGTCAGCACGAGTGAAGCGTGGTTTCCTGAGCTTGAAGGGCTCTGAATGGGTCTGCGTCGCCTaGGTACCTTCCCCTGTCTCC +
Preference number: 2 (lower is better)
Translates to: TFRSARVKRGFLSLKGSEWVCVA*VPSPVS
Trigger: GGAGACAGGGGAAGGTACCCAGGCGACGCAGACCCA...TTCAGAGCCCTTCAAGCTCAGGAAACCACGCTTCACTCGTGCTGACCTGAAAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR TCA 90 bp CCCCTGTCTCCTCTCCCAAGTCCCAGAATCTCTTCCACTCAACTCTACACTGTGTGCAGATGCCAAGTGTaGCCACCTACCCACAGAGGG +
Preference number: 2 (lower is better)
Translates to: PLSPLPSPRISSTQLYTVCRCQV*PPTHRG
Trigger: CCCTCTGTGGGTAGGTGGTCACACTTGGCATCTGCA...CACAGTGTAGAGTTGAGTGGAAGAGATTCTGGGACTTGGGAGAGGAGACAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR TCA 90 bp AATGAAGCTGAAGGAATCGAGTGGGAGGGACTGTTCTCCTCTTTGGGGGAGCTCTGCAGATGCCAAGTGTaGCCACCTACCCACAGAGGG +
Preference number: 2 (lower is better)
Translates to: NEAEGIEWEGLFSSLGELCRCQV*PPTHRG
Trigger: CCCTCTGTGGGTAGGTGGTCACACTTGGCATCTGCA...GAGCTCCCCCAAAGAGGAGAACAGTCCCTCCCACTCGATTCCTTCAGCTTCATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR TCA 90 bp GATCTGGTCCCGGTGGCCACACGCATGCGGGCAGTGTGGGTGCTGAGCTGCTGGTGGAAAGGAACAAAGTaGTGGCATTCTCATCTATAT +
Preference number: 2 (lower is better)
Translates to: DLVPVATRMRAVWVLSCWWKGTK*WHSHLY
Trigger: ATATAGATGAGAATGCCATCACTTTGTTCCTTTCCA...CCAGCAGCTCAGCACCCACACTGCCCGCATGCGTGTGGCCACCGGGACCAGATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR TCA 90 bp ACTAAAGCGGTTTTAGAGAAATTGCAGGCAGCAACCCCACCCACTCCCTTTACCCATGCTTGGGAATTCTaGCCCCTGGCCCCAGGAGGG +
Preference number: 2 (lower is better)
Translates to: TKAVLEKLQAATPPTPFTHAWEF*PLAPGG
Trigger: CCCTCCTGGGGCCAGGGGTCAGAATTCCCAAGCATG...GGTAAAGGGAGTGGGTGGGGTTGCTGCCTGCAATTTCTCTAAAACCGCTTTAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR TCA 90 bp AACTGCAGGCCCCCTGGAATTTACCTGGCCATCAGACCTGCCAGCAACAGTGGCCTTACATCTGTGGAGTaGCTGGACCACACACACACA +
Preference number: 2 (lower is better)
Translates to: NCRPPGIYLAIRPASNSGLTSVE*LDHTHT
Trigger: TGTGTGTGTGTGGTCCAGTCACTCCACAGATGTAAG...GCCACTGTTGCTGGCAGGTCTGATGGCCAGGTAAATTCCAGGGGGCCTGCAGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR TCA 90 bp ATGCGGGCAGTGTGGGTGCTGAGCTGCTGGAGGAGTAGCTCTCCACTCCCTGACCTATGTAATGAGAGGTaGCCAGCAAGCCTGTATCTA +
Preference number: 2 (lower is better)
Translates to: MRAVWVLSCWRSSSPLPDLCNER*PASLYL
Trigger: TAGATACAGGCTTGCTGGTCACCTCTCATTACATAG...GTCAGGGAGTGGAGAGCTACTCCTCCAGCAGCTCAGCACCCACACTGCCCGCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR TCA 90 bp AACTGCAGGCCCCCTGGAATTTACCTGGCCATCAGACCTGCCAGCAACAGTGGCGTCCTCTGTCTGGTGTaGGACACCCCTTTCTCTATT +
Preference number: 2 (lower is better)
Translates to: NCRPPGIYLAIRPASNSGVLCLV*DTPFSI
Trigger: AATAGAGAAAGGGGTGTCTCACACCAGACAGAGGAC...GCCACTGTTGCTGGCAGGTCTGATGGCCAGGTAAATTCCAGGGGGCCTGCAGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR TCA 90 bp AACTGCAGGCCCCCTGGAATTTACCTGGCCATCAGACCTGCCAGCAACAGTGGCGGCGGTAGGAGGTTATaGCAAGAGACTGACAGCTTA +
Preference number: 2 (lower is better)
Translates to: NCRPPGIYLAIRPASNSGGGRRL*QETDSL
Trigger: TAAGCTGTCAGTCTCTTGTCATAACCTCCTACCGCC...GCCACTGTTGCTGGCAGGTCTGATGGCCAGGTAAATTCCAGGGGGCCTGCAGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR GCA 90 bp ATGCGGGCAGTGTGGGTGCTGAGCTGCTGGAGGAGTAGCTCTCCACTCCCTGACCTGGGCAGTTACATGTaGCAGAACACACTGGTATTT +
Preference number: 2 (lower is better)
Translates to: MRAVWVLSCWRSSSPLPDLGSYM*QNTLVF
Trigger: AAATACCAGTGTGTTCTGGCACATGTAACTGCCCAG...GTCAGGGAGTGGAGAGCTACTCCTCCAGCAGCTCAGCACCCACACTGCCCGCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR GCA 90 bp CAAAGGGTAAAAGCGTGCTGCCCGCTCTGCACACGGCAGAAGCTGGAAAATGCCAGGACAGTAGAGGTCTaGTCCCACCAAGGGTTGGAA +
Preference number: 2 (lower is better)
Translates to: QRVKACCPLCTRQKLENARTVEV*SHQGLE
Trigger: TTCCAACCCTTGGTGGGAGCAGACCTCTACTGTCCT...GGCATTTTCCAGCTTCTGCCGTGTGCAGAGCGGGCAGCACGCTTTTACCCTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR GCA 90 bp CCCCTGTCTCCTCTCCCAAGTCCCAGAATCTCTTCCACTCAACTCTACACTGTGCGCACGACAGCACTTTaGTCCACACAGAGAGCGGTC +
Preference number: 2 (lower is better)
Translates to: PLSPLPSPRISSTQLYTVRTTAL*STQRAV
Trigger: GACCGCTCTCTGTGTGGAGCAAAGTGCTGTCGTGCG...CACAGTGTAGAGTTGAGTGGAAGAGATTCTGGGACTTGGGAGAGGAGACAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR GCA 90 bp CAAAGGGTAAAAGCGTGCTGCCCGCTCTGCACACGGCAGAAGCTGGAAAATGCCACACACACACACATGTaGGTCCCCCTTGCTCAGGAT +
Preference number: 2 (lower is better)
Translates to: QRVKACCPLCTRQKLENATHTHM*VPLAQD
Trigger: ATCCTGAGCAAGGGGGACGCACATGTGTGTGTGTGT...GGCATTTTCCAGCTTCTGCCGTGTGCAGAGCGGGCAGCACGCTTTTACCCTTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR GCA 90 bp GATCTGGTCCCGGTGGCCACACGCATGCGGGCAGTGTGGGTGCTGAGCTGCTGGCCGATTGCTAACTTATaGTACATTCATGTCAGAAGA +
Preference number: 2 (lower is better)
Translates to: DLVPVATRMRAVWVLSCWPIANL*YIHVRR
Trigger: TCTTCTGACATGAATGTAGCATAAGTTAGCAATCGG...CCAGCAGCTCAGCACCCACACTGCCCGCATGCGTGTGGCCACCGGGACCAGATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR GCA 90 bp AATGAAGCTGAAGGAATCGAGTGGGAGGGACTGTTCTCCTCTTTGGGGGAGCTCGTGTGGGTGCTGAGCTaGTGGAGGAGTAGCTCTCCA +
Preference number: 2 (lower is better)
Translates to: NEAEGIEWEGLFSSLGELVWVLS*WRSSSP
Trigger: TGGAGAGCTACTCCTCCAGCAGCTCAGCACCCACAC...GAGCTCCCCCAAAGAGGAGAACAGTCCCTCCCACTCGATTCCTTCAGCTTCATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR CCA 90 bp ACTAAAGCGGTTTTAGAGAAATTGCAGGCAGCAACCCCACCCACTCCCTTTACCGGCTCGCAGGAGCCTTaGGATATGCTCCTGGCCCAG +
Preference number: 2 (lower is better)
Translates to: TKAVLEKLQAATPPTPFTGSQEP*DMLLAQ
Trigger: CTGGGCCAGGAGCATATCCCAAGGCTCCTGCGAGCC...GGTAAAGGGAGTGGGTGGGGTTGCTGCCTGCAATTTCTCTAAAACCGCTTTAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR CCA 90 bp TGTGCACGTGTCTCTGTGAGCACATTCACGGTGCATGCACCATTTTTGATGTCTGGACAGGGTCGCCACTaGCTCGCAGGAGCCTTGGGA +
Preference number: 2 (lower is better)
Translates to: CARVSVSTFTVHAPFLMSGQGRH*LAGALG
Trigger: TCCCAAGGCTCCTGCGAGCCAGTGGCGACCCTGTCC...AGACATCAAAAATGGTGCATGCACCGTGAATGTGCTCACAGAGACACGTGCACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR CCA 90 bp GATCTGGTCCCGGTGGCCACACGCATGCGGGCAGTGTGGGTGCTGAGCTGCTGGCTCCAATTTCCTTTATaGGTGAGTATCTTACATCTG +
Preference number: 2 (lower is better)
Translates to: DLVPVATRMRAVWVLSCWLQFPL*VSILHL
Trigger: CAGATGTAAGATACTCACCCATAAAGGAAATTGGAG...CCAGCAGCTCAGCACCCACACTGCCCGCATGCGTGTGGCCACCGGGACCAGATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR CCA 90 bp CAAAGGGTAAAAGCGTGCTGCCCGCTCTGCACACGGCAGAAGCTGGAAAATGCCCAGAGGTCCTCTGTCTaGTGTGAGACACCCCTTTCT +
Preference number: 2 (lower is better)
Translates to: QRVKACCPLCTRQKLENAQRSSV*CETPLS
Trigger: AGAAAGGGGTGTCTCACACCAGACAGAGGACCTCTG...GGCATTTTCCAGCTTCTGCCGTGTGCAGAGCGGGCAGCACGCTTTTACCCTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR CCA 90 bp CAAAGGGTAAAAGCGTGCTGCCCGCTCTGCACACGGCAGAAGCTGGAAAATGCCAAACACGTCCAGGGTTaGGGACTGAGGGATCAGAGA +
Preference number: 2 (lower is better)
Translates to: QRVKACCPLCTRQKLENAKHVQG*GLRDQR
Trigger: TCTCTGATCCCTCAGTCCCCAACCCTGGACGTGTTT...GGCATTTTCCAGCTTCTGCCGTGTGCAGAGCGGGCAGCACGCTTTTACCCTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR CCA 90 bp GTATGCCACAATCACTCGGGATCTGGTCCCGGTGGCCACACGCATGCGGGCAGTCAACCCACAGGAGTTTaGAAGAACCGATTGCTAACT +
Preference number: 2 (lower is better)
Translates to: VCHNHSGSGPGGHTHAGSQPTGV*KNRLLT
Trigger: AGTTAGCAATCGGTTCTTCCAAACTCCTGTGGGTTG...ACTGCCCGCATGCGTGTGGCCACCGGGACCAGATCCCGAGTGATTGTGGCATAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR CCA 90 bp ATGCGGGCAGTGTGGGTGCTGAGCTGCTGGAGGAGTAGCTCTCCACTCCCTGACCAACCCACAGGAGTTTaGAAGAACCGATTGCTAACT +
Preference number: 2 (lower is better)
Translates to: MRAVWVLSCWRSSSPLPDQPTGV*KNRLLT
Trigger: AGTTAGCAATCGGTTCTTCCAAACTCCTGTGGGTTG...GTCAGGGAGTGGAGAGCTACTCCTCCAGCAGCTCAGCACCCACACTGCCCGCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR CCA 90 bp AACTGCAGGCCCCCTGGAATTTACCTGGCCATCAGACCTGCCAGCAACAGTGGCCACCTCGTAGGTTCATaGCCTCTTTCTTCAGAGGCA +
Preference number: 2 (lower is better)
Translates to: NCRPPGIYLAIRPASNSGHLVGS*PLSSEA
Trigger: TGCCTCTGAAGAAAGAGGCCATGAACCTACGAGGTG...GCCACTGTTGCTGGCAGGTCTGATGGCCAGGTAAATTCCAGGGGGCCTGCAGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR CCA 90 bp TGTGCACGTGTCTCTGTGAGCACATTCACGGTGCATGCACCATTTTTGATGTCTCGCATGCGGGCAGTGTaGGTGCTGAGCTGCTGGAGG +
Preference number: 2 (lower is better)
Translates to: CARVSVSTFTVHAPFLMSRMRAV*VLSCWR
Trigger: CCTCCAGCAGCTCAGCACCCACACTGCCCGCATGCG...AGACATCAAAAATGGTGCATGCACCGTGAATGTGCTCACAGAGACACGTGCACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR CCA 90 bp AATGAAGCTGAAGGAATCGAGTGGGAGGGACTGTTCTCCTCTTTGGGGGAGCTCGCTCTTGGACTAACGTaGGTCTGCGTCGCCTGGGTA +
Preference number: 2 (lower is better)
Translates to: NEAEGIEWEGLFSSLGELALGLT*VCVAWV
Trigger: TACCCAGGCGACGCAGACCCACGTTAGTCCAAGAGC...GAGCTCCCCCAAAGAGGAGAACAGTCCCTCCCACTCGATTCCTTCAGCTTCATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR TCA 90 bp CAAAGGGTAAAAGCGTGCTGCCCGCTCTGCACACGGCAGAAGCTGGAAAATGCCAAGCTCCCAGCAAGTTaGCAAAAAGAAGGGGGAGGT +
Preference number: 2 (lower is better)
Translates to: QRVKACCPLCTRQKLENAKLPAS*QKEGGG
Trigger: ACCTCCCCCTTCTTTTTGTCAACTTGCTGGGAGCTT...GGCATTTTCCAGCTTCTGCCGTGTGCAGAGCGGGCAGCACGCTTTTACCCTTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR TCA 90 bp GTATGCCACAATCACTCGGGATCTGGTCCCGGTGGCCACACGCATGCGGGCAGTAAAGTTAACAGCCTATaGGCTTCTAGTTTCTGCGAG +
Preference number: 2 (lower is better)
Translates to: VCHNHSGSGPGGHTHAGSKVNSL*ASSFCE
Trigger: CTCGCAGAAACTAGAAGCTCATAGGCTGTTAACTTT...ACTGCCCGCATGCGTGTGGCCACCGGGACCAGATCCCGAGTGATTGTGGCATAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR TCA 90 bp ATGCGGGCAGTGTGGGTGCTGAGCTGCTGGAGGAGTAGCTCTCCACTCCCTGACAAAGTTAACAGCCTATaGGCTTCTAGTTTCTGCGAG +
Preference number: 2 (lower is better)
Translates to: MRAVWVLSCWRSSSPLPDKVNSL*ASSFCE
Trigger: CTCGCAGAAACTAGAAGCTCATAGGCTGTTAACTTT...GTCAGGGAGTGGAGAGCTACTCCTCCAGCAGCTCAGCACCCACACTGCCCGCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR TCA 90 bp ATGCGGGCAGTGTGGGTGCTGAGCTGCTGGAGGAGTAGCTCTCCACTCCCTGACTATCTGTGTGTTTCTTaGCTGTATGGACTCCCTGTA +
Preference number: 2 (lower is better)
Translates to: MRAVWVLSCWRSSSPLPDYLCVS*LYGLPV
Trigger: TACAGGGAGTCCATACAGTCAAGAAACACACAGATA...GTCAGGGAGTGGAGAGCTACTCCTCCAGCAGCTCAGCACCCACACTGCCCGCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR TCA 90 bp TGTGCACGTGTCTCTGTGAGCACATTCACGGTGCATGCACCATTTTTGATGTCTGGGCAGTGTGGGTGCTaGGCTGCTGGAGGAGTAGCT +
Preference number: 2 (lower is better)
Translates to: CARVSVSTFTVHAPFLMSGQCGC*AAGGVA
Trigger: AGCTACTCCTCCAGCAGCTCAGCACCCACACTGCCC...AGACATCAAAAATGGTGCATGCACCGTGAATGTGCTCACAGAGACACGTGCACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR GCA 90 bp ACTTTCAGGTCAGCACGAGTGAAGCGTGGTTTCCTGAGCTTGAAGGGCTCTGAACGCACGACAGCACTTTaGTCCACACAGAGAGCGGTC +
Preference number: 2 (lower is better)
Translates to: TFRSARVKRGFLSLKGSERTTAL*STQRAV
Trigger: GACCGCTCTCTGTGTGGAGCAAAGTGCTGTCGTGCG...TTCAGAGCCCTTCAAGCTCAGGAAACCACGCTTCACTCGTGCTGACCTGAAAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR GCA 90 bp AACTTTTACAGCCACCCCTCTGGGAGTTGTACACACCTTTCAGTAGCCGAAGGGAGGAGCCTTGGGATATaGTCCTGGCCCAGGGACACT +
Preference number: 2 (lower is better)
Translates to: NFYSHPSGSCTHLSVAEGRSLGI*SWPRDT
Trigger: AGTGTCCCTGGGCCAGGAGCATATCCCAAGGCTCCT...CCCTTCGGCTACTGAAAGGTGTGTACAACTCCCAGAGGGGTGGCTGTAAAAGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR GCA 90 bp CCCCTGTCTCCTCTCCCAAGTCCCAGAATCTCTTCCACTCAACTCTACACTGTGCATGTGCGTCCCCCTTaGTCAGGATGTCTGGGTGTA +
Preference number: 2 (lower is better)
Translates to: PLSPLPSPRISSTQLYTVHVRPP*SGCLGV
Trigger: TACACCCAGACATCCTGAGCAAGGGGGACGCACATG...CACAGTGTAGAGTTGAGTGGAAGAGATTCTGGGACTTGGGAGAGGAGACAGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR GCA 90 bp AACTGCAGGCCCCCTGGAATTTACCTGGCCATCAGACCTGCCAGCAACAGTGGCGCAAGCCTGTATCTATaGCAGAGTGTGGTAGAAGAG +
Preference number: 2 (lower is better)
Translates to: NCRPPGIYLAIRPASNSGASLYL*QSVVEE
Trigger: CTCTTCTACCACACTCTGGCATAGATACAGGCTTGC...GCCACTGTTGCTGGCAGGTCTGATGGCCAGGTAAATTCCAGGGGGCCTGCAGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR GCA 90 bp GTATGCCACAATCACTCGGGATCTGGTCCCGGTGGCCACACGCATGCGGGCAGTACATCCTGTTTACTCTaGAGAGAAAAACAGGCTTGG +
Preference number: 2 (lower is better)
Translates to: VCHNHSGSGPGGHTHAGSTSCLL*REKQAW
Trigger: CCAAGCCTGTTTTTCTCTGCAGAGTAAACAGGATGT...ACTGCCCGCATGCGTGTGGCCACCGGGACCAGATCCCGAGTGATTGTGGCATAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR CCA 90 bp AACTGCAGGCCCCCTGGAATTTACCTGGCCATCAGACCTGCCAGCAACAGTGGCCAGCATAATGCAGACTaGGATGTCCACACAAGTGCT +
Preference number: 2 (lower is better)
Translates to: NCRPPGIYLAIRPASNSGQHNAD*DVHTSA
Trigger: AGCACTTGTGTGGACATCCCAGTCTGCATTATGCTG...GCCACTGTTGCTGGCAGGTCTGATGGCCAGGTAAATTCCAGGGGGCCTGCAGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR CCA 90 bp CCCCTGTCTCCTCTCCCAAGTCCCAGAATCTCTTCCACTCAACTCTACACTGTGGGGAATTCTGACCCCTaGCCCCAGGAGGGAATACAA +
Preference number: 2 (lower is better)
Translates to: PLSPLPSPRISSTQLYTVGNSDP*PQEGIQ
Trigger: TTGTATTCCCTCCTGGGGCCAGGGGTCAGAATTCCC...CACAGTGTAGAGTTGAGTGGAAGAGATTCTGGGACTTGGGAGAGGAGACAGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR CCA 90 bp ACTTTCAGGTCAGCACGAGTGAAGCGTGGTTTCCTGAGCTTGAAGGGCTCTGAAGCTCTTGGACTAACGTaGGTCTGCGTCGCCTGGGTA +
Preference number: 2 (lower is better)
Translates to: TFRSARVKRGFLSLKGSEALGLT*VCVAWV
Trigger: TACCCAGGCGACGCAGACCCACGTTAGTCCAAGAGC...TTCAGAGCCCTTCAAGCTCAGGAAACCACGCTTCACTCGTGCTGACCTGAAAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR CAA 90 bp ATCTGTGGAGTGACTGGACCACACACACACACATGTGCGTCCCCCTaGCTCAGGATGTCTGGGTGTATGTACGAAGGCACTAAAGCGGTT +
Preference number: 2 (lower is better)
Translates to: ICGVTGPHTHTCASP*LRMSGCMYEGTKAV
Trigger: AACCGCTTTAGTGCCTTCGTACATACACCCAGACATCCTGAGCAAGGGGGACGCACATGTGTGTGTGTGTGGTCCAGTCACTCCACAGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR TCA 90 bp AACTGCAGGCCCCCTGGAATTTACCTGGCCATCAGACCTGCCAGCAACAGTGGCCCCCAACAATTCTTTTaGATTTCCCTCCCTCCCAAA +
Preference number: 2 (lower is better)
Translates to: NCRPPGIYLAIRPASNSGPQQFF*ISLPPK
Trigger: TTTGGGAGGGAGGGAAATTCAAAAGAATTGTTGGGG...GCCACTGTTGCTGGCAGGTCTGATGGCCAGGTAAATTCCAGGGGGCCTGCAGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR TCA 90 bp ATGCGGGCAGTGTGGGTGCTGAGCTGCTGGAGGAGTAGCTCTCCACTCCCTGACTTTTTGTTTTTAAAGTaGGGCTCCGTCAAGTCTTCC +
Preference number: 2 (lower is better)
Translates to: MRAVWVLSCWRSSSPLPDFLFLK*GSVKSS
Trigger: GGAAGACTTGACGGAGCCTCACTTTAAAAACAAAAA...GTCAGGGAGTGGAGAGCTACTCCTCCAGCAGCTCAGCACCCACACTGCCCGCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR TCA 90 bp ACTAAAGCGGTTTTAGAGAAATTGCAGGCAGCAACCCCACCCACTCCCTTTACCTGCAGATGCCAAGTGTaGCCACCTACCCACAGAGGG +
Preference number: 2 (lower is better)
Translates to: TKAVLEKLQAATPPTPFTCRCQV*PPTHRG
Trigger: CCCTCTGTGGGTAGGTGGTCACACTTGGCATCTGCA...GGTAAAGGGAGTGGGTGGGGTTGCTGCCTGCAATTTCTCTAAAACCGCTTTAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR TCA 90 bp ACTTTCAGGTCAGCACGAGTGAAGCGTGGTTTCCTGAGCTTGAAGGGCTCTGAAGAAGGGGCACGGTGGTaGTTCAAATTGCAGAGCAGG +
Preference number: 2 (lower is better)
Translates to: TFRSARVKRGFLSLKGSEEGARW*FKLQSR
Trigger: CCTGCTCTGCAATTTGAATCACCACCGTGCCCCTTC...TTCAGAGCCCTTCAAGCTCAGGAAACCACGCTTCACTCGTGCTGACCTGAAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR TCA 90 bp AACTGCAGGCCCCCTGGAATTTACCTGGCCATCAGACCTGCCAGCAACAGTGGCCCTTCTCTAGATGTCTaGATACAAGCTGCTCTTCAC +
Preference number: 2 (lower is better)
Translates to: NCRPPGIYLAIRPASNSGPSLDV*IQAALH
Trigger: GTGAAGAGCAGCTTGTATTCAGACATCTAGAGAAGG...GCCACTGTTGCTGGCAGGTCTGATGGCCAGGTAAATTCCAGGGGGCCTGCAGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR TCA 90 bp GTATGCCACAATCACTCGGGATCTGGTCCCGGTGGCCACACGCATGCGGGCAGTAACATCACCAAAAACTaGAAGGAAACACTCCACATC +
Preference number: 2 (lower is better)
Translates to: VCHNHSGSGPGGHTHAGSNITKN*KETLHI
Trigger: GATGTGGAGTGTTTCCTTTCAGTTTTTGGTGATGTT...ACTGCCCGCATGCGTGTGGCCACCGGGACCAGATCCCGAGTGATTGTGGCATAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR TCA 90 bp GTATGCCACAATCACTCGGGATCTGGTCCCGGTGGCCACACGCATGCGGGCAGTATCAGAGATGTTACATaGGCCATCCATTTCTTCACA +
Preference number: 2 (lower is better)
Translates to: VCHNHSGSGPGGHTHAGSIRDVT*AIHFFT
Trigger: TGTGAAGAAATGGATGGCTCATGTAACATCTCTGAT...ACTGCCCGCATGCGTGTGGCCACCGGGACCAGATCCCGAGTGATTGTGGCATAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR TCA 90 bp ATGCGGGCAGTGTGGGTGCTGAGCTGCTGGAGGAGTAGCTCTCCACTCCCTGACAATAGGGACCATTTCTaGAAATACACACACCTTTGG +
Preference number: 2 (lower is better)
Translates to: MRAVWVLSCWRSSSPLPDNRDHF*KYTHLW
Trigger: CCAAAGGTGTGTGTATTTTCAGAAATGGTCCCTATT...GTCAGGGAGTGGAGAGCTACTCCTCCAGCAGCTCAGCACCCACACTGCCCGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR GCA 90 bp CACACACATGTGCGTCCCCCTTGCTCAGGATGTCTGGGTGTATGTACGAAGGCAGCAGCCCAATGGAGTTaGTTTAGTAGCAGTGGCTCT +
Preference number: 2 (lower is better)
Translates to: HTHVRPPCSGCLGVCTKAAAQWS*FSSSGS
Trigger: AGAGCCACTGCTACTAAAGCAACTCCATTGGGCTGC...TGCCTTCGTACATACACCCAGACATCCTGAGCAAGGGGGACGCACATGTGTGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR GCA 90 bp GTATGCCACAATCACTCGGGATCTGGTCCCGGTGGCCACACGCATGCGGGCAGTTCGCTAAGTTATACCTaGCTAAGCAAAACCACATAC +
Preference number: 2 (lower is better)
Translates to: VCHNHSGSGPGGHTHAGSSLSYT*LSKTTY
Trigger: GTATGTGGTTTTGCTTAGGCAGGTATAACTTAGCGA...ACTGCCCGCATGCGTGTGGCCACCGGGACCAGATCCCGAGTGATTGTGGCATAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR GCA 90 bp CAAAGGGTAAAAGCGTGCTGCCCGCTCTGCACACGGCAGAAGCTGGAAAATGCCTGTCTGAATACAAGCTaGTCTTCACCTGGTGGTCAC +
Preference number: 2 (lower is better)
Translates to: QRVKACCPLCTRQKLENACLNTS*SSPGGH
Trigger: GTGACCACCAGGTGAAGAGCAGCTTGTATTCAGACA...GGCATTTTCCAGCTTCTGCCGTGTGCAGAGCGGGCAGCACGCTTTTACCCTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR CCA 90 bp AATGAAGCTGAAGGAATCGAGTGGGAGGGACTGTTCTCCTCTTTGGGGGAGCTCCAGAACGAGCATGCCTaGGCAGTTACATGTGCCAGA +
Preference number: 2 (lower is better)
Translates to: NEAEGIEWEGLFSSLGELQNEHA*AVTCAR
Trigger: TCTGGCACATGTAACTGCCCAGGCATGCTCGTTCTG...GAGCTCCCCCAAAGAGGAGAACAGTCCCTCCCACTCGATTCCTTCAGCTTCATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR CCA 90 bp CACACACATGTGCGTCCCCCTTGCTCAGGATGTCTGGGTGTATGTACGAAGGCACACCAAGGGTTGGAATaGGCAGGTATTTGCTGGTAC +
Preference number: 2 (lower is better)
Translates to: HTHVRPPCSGCLGVCTKAHQGLE*AGICWY
Trigger: GTACCAGCAAATACCTGCCCATTCCAACCCTTGGTG...TGCCTTCGTACATACACCCAGACATCCTGAGCAAGGGGGACGCACATGTGTGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR CCA 90 bp CCCCTGTCTCCTCTCCCAAGTCCCAGAATCTCTTCCACTCAACTCTACACTGTGGCTCCCACCAAGGGTTaGAATGGGCAGGTATTTGCT +
Preference number: 2 (lower is better)
Translates to: PLSPLPSPRISSTQLYTVAPTKG*NGQVFA
Trigger: AGCAAATACCTGCCCATTCCAACCCTTGGTGGGAGC...CACAGTGTAGAGTTGAGTGGAAGAGATTCTGGGACTTGGGAGAGGAGACAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR CCA 90 bp TGTGCACGTGTCTCTGTGAGCACATTCACGGTGCATGCACCATTTTTGATGTCTACAGAGAGCGGTCAGTaGGGGCTGCTGGAAGCAGAG +
Preference number: 2 (lower is better)
Translates to: CARVSVSTFTVHAPFLMSTESGQ*GLLEAE
Trigger: CTCTGCTTCCAGCAGCCCCCACTGACCGCTCTCTGT...AGACATCAAAAATGGTGCATGCACCGTGAATGTGCTCACAGAGACACGTGCACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR CCA 90 bp TCTGAACCAAGAAAGGTTGAGAGCTCCAGGTATTGTGTGGAGAACATTCTGGAGGGCTCGCAGGAGCCTTaGGATATGCTCCTGGCCCAG +
Preference number: 2 (lower is better)
Translates to: SEPRKVESSRYCVENILEGSQEP*DMLLAQ
Trigger: CTGGGCCAGGAGCATATCCCAAGGCTCCTGCGAGCC...CTCCAGAATGTTCTCCACACAATACCTGGAGCTCTCAACCTTTCTTGGTTCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR CCA 90 bp GGGTTTATCTTAAAGATGGGGGCGAAGGGGGTGTCTGCAAAGAAGCAATTCAAAGGCTCGCAGGAGCCTTaGGATATGCTCCTGGCCCAG +
Preference number: 2 (lower is better)
Translates to: GFILKMGAKGVSAKKQFKGSQEP*DMLLAQ
Trigger: CTGGGCCAGGAGCATATCCCAAGGCTCCTGCGAGCC...TTTGAATTGCTTCTTTGCAGACACCCCCTTCGCCCCCATCTTTAAGATAAACCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR CCA 90 bp GGATTTTTGCTGTACCTTCCTGTTACCTGTTTGTGTGCAAAGTTGGAAAGCTGCGGACAGGGTCGCCACTaGCTCGCAGGAGCCTTGGGA +
Preference number: 2 (lower is better)
Translates to: GFLLYLPVTCLCAKLESCGQGRH*LAGALG
Trigger: TCCCAAGGCTCCTGCGAGCCAGTGGCGACCCTGTCC...GCAGCTTTCCAACTTTGCACACAAACAGGTAACAGGAAGGTACAGCAAAAATCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR CCA 90 bp CCCCTGTCTCCTCTCCCAAGTCCCAGAATCTCTTCCACTCAACTCTACACTGTGCTTTACCTGTCGAGCTaGAGTTTCCTTCCCACTGGG +
Preference number: 2 (lower is better)
Translates to: PLSPLPSPRISSTQLYTVLYLSS*SFLPTG
Trigger: CCCAGTGGGAAGGAAACTCCAGCTCGACAGGTAAAG...CACAGTGTAGAGTTGAGTGGAAGAGATTCTGGGACTTGGGAGAGGAGACAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR CCA 90 bp AATGAAGCTGAAGGAATCGAGTGGGAGGGACTGTTCTCCTCTTTGGGGGAGCTCCTTTACCTGTCGAGCTaGAGTTTCCTTCCCACTGGG +
Preference number: 2 (lower is better)
Translates to: NEAEGIEWEGLFSSLGELLYLSS*SFLPTG
Trigger: CCCAGTGGGAAGGAAACTCCAGCTCGACAGGTAAAG...GAGCTCCCCCAAAGAGGAGAACAGTCCCTCCCACTCGATTCCTTCAGCTTCATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR CCA 90 bp AATGAAGCTGAAGGAATCGAGTGGGAGGGACTGTTCTCCTCTTTGGGGGAGCTCAAACACGTCCAGGGTTaGGGACTGAGGGATCAGAGA +
Preference number: 2 (lower is better)
Translates to: NEAEGIEWEGLFSSLGELKHVQG*GLRDQR
Trigger: TCTCTGATCCCTCAGTCCCCAACCCTGGACGTGTTT...GAGCTCCCCCAAAGAGGAGAACAGTCCCTCCCACTCGATTCCTTCAGCTTCATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR CCA 90 bp TCTGAACCAAGAAAGGTTGAGAGCTCCAGGTATTGTGTGGAGAACATTCTGGAGTGGGTCTGCGTCGCCTaGGTACCTTCCCCTGTCTCC +
Preference number: 2 (lower is better)
Translates to: SEPRKVESSRYCVENILEWVCVA*VPSPVS
Trigger: GGAGACAGGGGAAGGTACCCAGGCGACGCAGACCCA...CTCCAGAATGTTCTCCACACAATACCTGGAGCTCTCAACCTTTCTTGGTTCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR CCA 90 bp AATGAAGCTGAAGGAATCGAGTGGGAGGGACTGTTCTCCTCTTTGGGGGAGCTCGTAAACCTGCGCTCTTaGACTAACGTGGGTCTGCGT +
Preference number: 2 (lower is better)
Translates to: NEAEGIEWEGLFSSLGELVNLRS*TNVGLR
Trigger: ACGCAGACCCACGTTAGTCCAAGAGCGCAGGTTTAC...GAGCTCCCCCAAAGAGGAGAACAGTCCCTCCCACTCGATTCCTTCAGCTTCATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR CCA 90 bp ACTTTCAGGTCAGCACGAGTGAAGCGTGGTTTCCTGAGCTTGAAGGGCTCTGAAGATGTGACGCCCATGTaGGAATGTAATGGCCGCCTC +
Preference number: 2 (lower is better)
Translates to: TFRSARVKRGFLSLKGSEDVTPM*ECNGRL
Trigger: GAGGCGGCCATTACATTCCCACATGGGCGTCACATC...TTCAGAGCCCTTCAAGCTCAGGAAACCACGCTTCACTCGTGCTGACCTGAAAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR TCA 90 bp CCCCTGTCTCCTCTCCCAAGTCCCAGAATCTCTTCCACTCAACTCTACACTGTGAAACGTTTCTGTCAGTaGTGGCCTGGTGCTGTAACG +
Preference number: 2 (lower is better)
Translates to: PLSPLPSPRISSTQLYTVKRFCQ*WPGAVT
Trigger: CGTTACAGCACCAGGCCATCACTGACAGAAACGTTT...CACAGTGTAGAGTTGAGTGGAAGAGATTCTGGGACTTGGGAGAGGAGACAGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR TCA 90 bp ACTAAAGCGGTTTTAGAGAAATTGCAGGCAGCAACCCCACCCACTCCCTTTACCGAAGGGGCACGGTGGTaGTTCAAATTGCAGAGCAGG +
Preference number: 2 (lower is better)
Translates to: TKAVLEKLQAATPPTPFTEGARW*FKLQSR
Trigger: CCTGCTCTGCAATTTGAATCACCACCGTGCCCCTTC...GGTAAAGGGAGTGGGTGGGGTTGCTGCCTGCAATTTCTCTAAAACCGCTTTAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR TCA 90 bp TCTGAACCAAGAAAGGTTGAGAGCTCCAGGTATTGTGTGGAGAACATTCTGGAGGGCAGGACACAGCAGTaGACCAAGAGCGGCAGTGGA +
Preference number: 2 (lower is better)
Translates to: SEPRKVESSRYCVENILEGRTQQ*TKSGSG
Trigger: TCCACTGCCGCTCTTGGTTCACTGCTGTGTCCTGCC...CTCCAGAATGTTCTCCACACAATACCTGGAGCTCTCAACCTTTCTTGGTTCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR TCA 90 bp ATGCGGGCAGTGTGGGTGCTGAGCTGCTGGAGGAGTAGCTCTCCACTCCCTGACAATTTCCTTTATGGGTaGGTATCTTACATCTGTGGA +
Preference number: 2 (lower is better)
Translates to: MRAVWVLSCWRSSSPLPDNFLYG*VSYICG
Trigger: TCCACAGATGTAAGATACTCACCCATAAAGGAAATT...GTCAGGGAGTGGAGAGCTACTCCTCCAGCAGCTCAGCACCCACACTGCCCGCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR GCA 90 bp TGTGCACGTGTCTCTGTGAGCACATTCACGGTGCATGCACCATTTTTGATGTCTCGCACGACAGCACTTTaGTCCACACAGAGAGCGGTC +
Preference number: 2 (lower is better)
Translates to: CARVSVSTFTVHAPFLMSRTTAL*STQRAV
Trigger: GACCGCTCTCTGTGTGGAGCAAAGTGCTGTCGTGCG...AGACATCAAAAATGGTGCATGCACCGTGAATGTGCTCACAGAGACACGTGCACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR GCA 90 bp CACACACATGTGCGTCCCCCTTGCTCAGGATGTCTGGGTGTATGTACGAAGGCATGTCTGAATACAAGCTaGTCTTCACCTGGTGGTCAC +
Preference number: 2 (lower is better)
Translates to: HTHVRPPCSGCLGVCTKACLNTS*SSPGGH
Trigger: GTGACCACCAGGTGAAGAGCAGCTTGTATTCAGACA...TGCCTTCGTACATACACCCAGACATCCTGAGCAAGGGGGACGCACATGTGTGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR GCA 90 bp ACTTTCAGGTCAGCACGAGTGAAGCGTGGTTTCCTGAGCTTGAAGGGCTCTGAAACACACACACACATGTaGGTCCCCCTTGCTCAGGAT +
Preference number: 2 (lower is better)
Translates to: TFRSARVKRGFLSLKGSETHTHM*VPLAQD
Trigger: ATCCTGAGCAAGGGGGACGCACATGTGTGTGTGTGT...TTCAGAGCCCTTCAAGCTCAGGAAACCACGCTTCACTCGTGCTGACCTGAAAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR GCA 90 bp CCCCTGTCTCCTCTCCCAAGTCCCAGAATCTCTTCCACTCAACTCTACACTGTGTTAAATTCAGCCCACTaGCTTTGGGGCCTGTCCAGA +
Preference number: 2 (lower is better)
Translates to: PLSPLPSPRISSTQLYTVLNSAH*LWGLSR
Trigger: TCTGGACAGGCCCCAAAGGCAGTGGGCTGAATTTAA...CACAGTGTAGAGTTGAGTGGAAGAGATTCTGGGACTTGGGAGAGGAGACAGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR GCA 90 bp GTATGCCACAATCACTCGGGATCTGGTCCCGGTGGCCACACGCATGCGGGCAGTGACTTTCCAAATCACTaGAGTTGTCACAATTACACA +
Preference number: 2 (lower is better)
Translates to: VCHNHSGSGPGGHTHAGSDFPNH*SCHNYT
Trigger: TGTGTAATTGTGACAACTGCAGTGATTTGGAAAGTC...ACTGCCCGCATGCGTGTGGCCACCGGGACCAGATCCCGAGTGATTGTGGCATAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR GCA 90 bp AACTGCAGGCCCCCTGGAATTTACCTGGCCATCAGACCTGCCAGCAACAGTGGCACATCCTGTTTACTCTaGAGAGAAAAACAGGCTTGG +
Preference number: 2 (lower is better)
Translates to: NCRPPGIYLAIRPASNSGTSCLL*REKQAW
Trigger: CCAAGCCTGTTTTTCTCTGCAGAGTAAACAGGATGT...GCCACTGTTGCTGGCAGGTCTGATGGCCAGGTAAATTCCAGGGGGCCTGCAGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR GCA 90 bp CAAAGGGTAAAAGCGTGCTGCCCGCTCTGCACACGGCAGAAGCTGGAAAATGCCAAGGCCACTCCACTTTaGCTCCAGTCAACTTTTACA +
Preference number: 2 (lower is better)
Translates to: QRVKACCPLCTRQKLENAKATPL*LQSTFT
Trigger: TGTAAAAGTTGACTGGAGGCAAAGTGGAGTGGCCTT...GGCATTTTCCAGCTTCTGCCGTGTGCAGAGCGGGCAGCACGCTTTTACCCTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR GCA 90 bp TCTGAACCAAGAAAGGTTGAGAGCTCCAGGTATTGTGTGGAGAACATTCTGGAGGGACTAACGTGGGTCTaGGTCGCCTGGGTACCTTCC +
Preference number: 2 (lower is better)
Translates to: SEPRKVESSRYCVENILEGLTWV*VAWVPS
Trigger: GGAAGGTACCCAGGCGACGCAGACCCACGTTAGTCC...CTCCAGAATGTTCTCCACACAATACCTGGAGCTCTCAACCTTTCTTGGTTCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR GCA 90 bp TGTGCACGTGTCTCTGTGAGCACATTCACGGTGCATGCACCATTTTTGATGTCTCAAAGGGTAAAAGCGTaGTGCCCGCTCTGCACACGG +
Preference number: 2 (lower is better)
Translates to: CARVSVSTFTVHAPFLMSQRVKA*CPLCTR
Trigger: CCGTGTGCAGAGCGGGCAGCACGCTTTTACCCTTTG...AGACATCAAAAATGGTGCATGCACCGTGAATGTGCTCACAGAGACACGTGCACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR CCA 90 bp ACTTTCAGGTCAGCACGAGTGAAGCGTGGTTTCCTGAGCTTGAAGGGCTCTGAAAAAATAAAAAGCAGATaGGCCGGCCAGCCAGCCTGC +
Preference number: 2 (lower is better)
Translates to: TFRSARVKRGFLSLKGSEKIKSR*AGQPAC
Trigger: GCAGGCTGGCTGGCCGGCCCATCTGCTTTTTATTTT...TTCAGAGCCCTTCAAGCTCAGGAAACCACGCTTCACTCGTGCTGACCTGAAAGT
52% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR CCA 90 bp GGGTTTATCTTAAAGATGGGGGCGAAGGGGGTGTCTGCAAAGAAGCAATTCAAAACAGAGAGCGGTCAGTaGGGGCTGCTGGAAGCAGAG +
Preference number: 2 (lower is better)
Translates to: GFILKMGAKGVSAKKQFKTESGQ*GLLEAE
Trigger: CTCTGCTTCCAGCAGCCCCCACTGACCGCTCTCTGT...TTTGAATTGCTTCTTTGCAGACACCCCCTTCGCCCCCATCTTTAAGATAAACCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR CCA 90 bp TGTGCACGTGTCTCTGTGAGCACATTCACGGTGCATGCACCATTTTTGATGTCTCTGCTCTTCACCTGGTaGTCACCGCACGACAGCACT +
Preference number: 2 (lower is better)
Translates to: CARVSVSTFTVHAPFLMSLLFTW*SPHDST
Trigger: AGTGCTGTCGTGCGGTGACCACCAGGTGAAGAGCAG...AGACATCAAAAATGGTGCATGCACCGTGAATGTGCTCACAGAGACACGTGCACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR CCA 90 bp TGTGCACGTGTCTCTGTGAGCACATTCACGGTGCATGCACCATTTTTGATGTCTAAGCTGCTCTTCACCTaGTGGTCACCGCACGACAGC +
Preference number: 2 (lower is better)
Translates to: CARVSVSTFTVHAPFLMSKLLFT*WSPHDS
Trigger: GCTGTCGTGCGGTGACCACCAGGTGAAGAGCAGCTT...AGACATCAAAAATGGTGCATGCACCGTGAATGTGCTCACAGAGACACGTGCACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR CCA 90 bp GTATGCCACAATCACTCGGGATCTGGTCCCGGTGGCCACACGCATGCGGGCAGTCTCCAATTTCCTTTATaGGTGAGTATCTTACATCTG +
Preference number: 2 (lower is better)
Translates to: VCHNHSGSGPGGHTHAGSLQFPL*VSILHL
Trigger: CAGATGTAAGATACTCACCCATAAAGGAAATTGGAG...ACTGCCCGCATGCGTGTGGCCACCGGGACCAGATCCCGAGTGATTGTGGCATAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR CCA 90 bp AACTTTTACAGCCACCCCTCTGGGAGTTGTACACACCTTTCAGTAGCCGAAGGGCAGAGGTCCTCTGTCTaGTGTGAGACACCCCTTTCT +
Preference number: 2 (lower is better)
Translates to: NFYSHPSGSCTHLSVAEGQRSSV*CETPLS
Trigger: AGAAAGGGGTGTCTCACACCAGACAGAGGACCTCTG...CCCTTCGGCTACTGAAAGGTGTGTACAACTCCCAGAGGGGTGGCTGTAAAAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR CCA 90 bp AACTGCAGGCCCCCTGGAATTTACCTGGCCATCAGACCTGCCAGCAACAGTGGCTGTTTCTTGACTGTATaGACTCCCTGTACTTGCAGA +
Preference number: 2 (lower is better)
Translates to: NCRPPGIYLAIRPASNSGCFLTV*TPCTCR
Trigger: TCTGCAAGTACAGGGAGTCCATACAGTCAAGAAACA...GCCACTGTTGCTGGCAGGTCTGATGGCCAGGTAAATTCCAGGGGGCCTGCAGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR CCA 90 bp TGTGCACGTGTCTCTGTGAGCACATTCACGGTGCATGCACCATTTTTGATGTCTTTCAGAGGCATGGGGTaGGGAGGTATGGTGAGCAGG +
Preference number: 2 (lower is better)
Translates to: CARVSVSTFTVHAPFLMSFRGMG*GGMVSR
Trigger: CCTGCTCACCATACCTCCCCACCCCATGCCTCTGAA...AGACATCAAAAATGGTGCATGCACCGTGAATGTGCTCACAGAGACACGTGCACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR CCA 90 bp CCCCTGTCTCCTCTCCCAAGTCCCAGAATCTCTTCCACTCAACTCTACACTGTGCACCTCGTAGGTTCATaGCCTCTTTCTTCAGAGGCA +
Preference number: 2 (lower is better)
Translates to: PLSPLPSPRISSTQLYTVHLVGS*PLSSEA
Trigger: TGCCTCTGAAGAAAGAGGCCATGAACCTACGAGGTG...CACAGTGTAGAGTTGAGTGGAAGAGATTCTGGGACTTGGGAGAGGAGACAGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR CCA 90 bp TGTGCACGTGTCTCTGTGAGCACATTCACGGTGCATGCACCATTTTTGATGTCTTGGGTGCTGAGCTGCTaGAGGAGTAGCTCTCCACTC +
Preference number: 2 (lower is better)
Translates to: CARVSVSTFTVHAPFLMSWVLSC*RSSSPL
Trigger: GAGTGGAGAGCTACTCCTCCAGCAGCTCAGCACCCA...AGACATCAAAAATGGTGCATGCACCGTGAATGTGCTCACAGAGACACGTGCACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR CCA 90 bp TCCCTAATGACTAAAGCTGACCGTCTGTTTGTTTGTATCCAACGGATAGCTTCTCGCATGCGGGCAGTGTaGGTGCTGAGCTGCTGGAGG +
Preference number: 2 (lower is better)
Translates to: SLMTKADRLFVCIQRIASRMRAV*VLSCWR
Trigger: CCTCCAGCAGCTCAGCACCCACACTGCCCGCATGCG...AGAAGCTATCCGTTGGATACAAACAAACAGACGGTCAGCTTTAGTCATTAGGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR CCA 90 bp CCCCTGTCTCCTCTCCCAAGTCCCAGAATCTCTTCCACTCAACTCTACACTGTGTTACAGCCACCCCTCTaGGAGTTGTACACACCTTTC +
Preference number: 2 (lower is better)
Translates to: PLSPLPSPRISSTQLYTVLQPPL*ELYTPF
Trigger: GAAAGGTGTGTACAACTCCCAGAGGGGTGGCTGTAA...CACAGTGTAGAGTTGAGTGGAAGAGATTCTGGGACTTGGGAGAGGAGACAGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR CCA 90 bp ACTTTCAGGTCAGCACGAGTGAAGCGTGGTTTCCTGAGCTTGAAGGGCTCTGAAGTAAACCTGCGCTCTTaGACTAACGTGGGTCTGCGT +
Preference number: 2 (lower is better)
Translates to: TFRSARVKRGFLSLKGSEVNLRS*TNVGLR
Trigger: ACGCAGACCCACGTTAGTCCAAGAGCGCAGGTTTAC...TTCAGAGCCCTTCAAGCTCAGGAAACCACGCTTCACTCGTGCTGACCTGAAAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR CAA 90 bp ATGTCTGGGTGTATGTACGAAGGCACTAAAGCGGTTTTAGAGAAATaGCAGGCAGCAACCCCACCCACTCCCTTTACCTGTCGAGCTGGA +
Preference number: 2 (lower is better)
Translates to: MSGCMYEGTKAVLEK*QAATPPTPFTCRAG
Trigger: TCCAGCTCGACAGGTAAAGGGAGTGGGTGGGGTTGCTGCCTGCAATTTCTCTAAAACCGCTTTAGTGCCTTCGTACATACACCCAGACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR TCA 90 bp AACTTTTACAGCCACCCCTCTGGGAGTTGTACACACCTTTCAGTAGCCGAAGGGCTTACATCTGTGGAGTaGCTGGACCACACACACACA +
Preference number: 2 (lower is better)
Translates to: NFYSHPSGSCTHLSVAEGLTSVE*LDHTHT
Trigger: TGTGTGTGTGTGGTCCAGTCACTCCACAGATGTAAG...CCCTTCGGCTACTGAAAGGTGTGTACAACTCCCAGAGGGGTGGCTGTAAAAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR TCA 90 bp AACTTTTACAGCCACCCCTCTGGGAGTTGTACACACCTTTCAGTAGCCGAAGGGGTCCTCTGTCTGGTGTaGGACACCCCTTTCTCTATT +
Preference number: 2 (lower is better)
Translates to: NFYSHPSGSCTHLSVAEGVLCLV*DTPFSI
Trigger: AATAGAGAAAGGGGTGTCTCACACCAGACAGAGGAC...CCCTTCGGCTACTGAAAGGTGTGTACAACTCCCAGAGGGGTGGCTGTAAAAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR TCA 90 bp AACTGCAGGCCCCCTGGAATTTACCTGGCCATCAGACCTGCCAGCAACAGTGGCATCAGAGATGTTACATaGGCCATCCATTTCTTCACA +
Preference number: 2 (lower is better)
Translates to: NCRPPGIYLAIRPASNSGIRDVT*AIHFFT
Trigger: TGTGAAGAAATGGATGGCTCATGTAACATCTCTGAT...GCCACTGTTGCTGGCAGGTCTGATGGCCAGGTAAATTCCAGGGGGCCTGCAGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR TCA 90 bp AATGAAGCTGAAGGAATCGAGTGGGAGGGACTGTTCTCCTCTTTGGGGGAGCTCGCGCAGCAGGGTTTGTaGGTTCCCTATTTTCTTAAC +
Preference number: 2 (lower is better)
Translates to: NEAEGIEWEGLFSSLGELAQQGL*VPYFLN
Trigger: GTTAAGAAAATAGGGAACTCACAAACCCTGCTGCGC...GAGCTCCCCCAAAGAGGAGAACAGTCCCTCCCACTCGATTCCTTCAGCTTCATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR TCA 90 bp CAAAGGGTAAAAGCGTGCTGCCCGCTCTGCACACGGCAGAAGCTGGAAAATGCCGTCACAGTGAAGAACTaGAGACTGAGCTTTTTGCAA +
Preference number: 2 (lower is better)
Translates to: QRVKACCPLCTRQKLENAVTVKN*RLSFLQ
Trigger: TTGCAAAAAGCTCAGTCTTCAGTTCTTCACTGTGAC...GGCATTTTCCAGCTTCTGCCGTGTGCAGAGCGGGCAGCACGCTTTTACCCTTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR GCA 90 bp ACTAAAGCGGTTTTAGAGAAATTGCAGGCAGCAACCCCACCCACTCCCTTTACCACACCAGAACGAGCATaGCTGGGCAGTTACATGTGC +
Preference number: 2 (lower is better)
Translates to: TKAVLEKLQAATPPTPFTTPERA*LGSYMC
Trigger: GCACATGTAACTGCCCAGGCATGCTCGTTCTGGTGT...GGTAAAGGGAGTGGGTGGGGTTGCTGCCTGCAATTTCTCTAAAACCGCTTTAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR GCA 90 bp AATGAAGCTGAAGGAATCGAGTGGGAGGGACTGTTCTCCTCTTTGGGGGAGCTCAGAGACAGAGAAGGATaGACGCGAATGCACATGAAC +
Preference number: 2 (lower is better)
Translates to: NEAEGIEWEGLFSSLGELRDREG*TRMHMN
Trigger: GTTCATGTGCATTCGCGTGCATCCTTCTCTGTCTCT...GAGCTCCCCCAAAGAGGAGAACAGTCCCTCCCACTCGATTCCTTCAGCTTCATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR GCA 90 bp CACACACATGTGCGTCCCCCTTGCTCAGGATGTCTGGGTGTATGTACGAAGGCAACAGATACTCAGATGTaGCTGGTGGCCATTCACTTA +
Preference number: 2 (lower is better)
Translates to: HTHVRPPCSGCLGVCTKATDTQM*LVAIHL
Trigger: TAAGTGAATGGCCACCAGGCACATCTGAGTATCTGT...TGCCTTCGTACATACACCCAGACATCCTGAGCAAGGGGGACGCACATGTGTGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR GCA 90 bp CACACACATGTGCGTCCCCCTTGCTCAGGATGTCTGGGTGTATGTACGAAGGCACGCCCCCTTCAGGTCTaGTATAATTCTCTTCACAAT +
Preference number: 2 (lower is better)
Translates to: HTHVRPPCSGCLGVCTKARPLQV*YNSLHN
Trigger: ATTGTGAAGAGAATTATAGCAGACCTGAAGGGGGCG...TGCCTTCGTACATACACCCAGACATCCTGAGCAAGGGGGACGCACATGTGTGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR GCA 90 bp TCCCTAATGACTAAAGCTGACCGTCTGTTTGTTTGTATCCAACGGATAGCTTCTAGCAGGAAGAGGGCATaGTCAAGGCACCCAGCGGGG +
Preference number: 2 (lower is better)
Translates to: SLMTKADRLFVCIQRIASSRKRA*SRHPAG
Trigger: CCCCGCTGGGTGCCTTGAGCATGCCCTCTTCCTGCT...AGAAGCTATCCGTTGGATACAAACAAACAGACGGTCAGCTTTAGTCATTAGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR GCA 90 bp TCTGAACCAAGAAAGGTTGAGAGCTCCAGGTATTGTGTGGAGAACATTCTGGAGAGGAGCCTTGGGATATaGTCCTGGCCCAGGGACACT +
Preference number: 2 (lower is better)
Translates to: SEPRKVESSRYCVENILERSLGI*SWPRDT
Trigger: AGTGTCCCTGGGCCAGGAGCATATCCCAAGGCTCCT...CTCCAGAATGTTCTCCACACAATACCTGGAGCTCTCAACCTTTCTTGGTTCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR GCA 90 bp CCCCTGTCTCCTCTCCCAAGTCCCAGAATCTCTTCCACTCAACTCTACACTGTGAAGAAGCTGTGGTCATaGTTGGGAATTCTGACCCCT +
Preference number: 2 (lower is better)
Translates to: PLSPLPSPRISSTQLYTVKKLWS*LGILTP
Trigger: AGGGGTCAGAATTCCCAAGCATGACCACAGCTTCTT...CACAGTGTAGAGTTGAGTGGAAGAGATTCTGGGACTTGGGAGAGGAGACAGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR GCA 90 bp CAAAGGGTAAAAGCGTGCTGCCCGCTCTGCACACGGCAGAAGCTGGAAAATGCCGGAACCCCTTCTATTTaGCCAAGACAAAGAGACTTT +
Preference number: 2 (lower is better)
Translates to: QRVKACCPLCTRQKLENAGTPSI*PRQRDF
Trigger: AAAGTCTCTTTGTCTTGGGCAAATAGAAGGGGTTCC...GGCATTTTCCAGCTTCTGCCGTGTGCAGAGCGGGCAGCACGCTTTTACCCTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR GCA 90 bp CAAAGGGTAAAAGCGTGCTGCCCGCTCTGCACACGGCAGAAGCTGGAAAATGCCTTCCTTTCACAGCTCTaGTACAACAGCATCATAAGC +
Preference number: 2 (lower is better)
Translates to: QRVKACCPLCTRQKLENAFLSQL*YNSIIS
Trigger: GCTTATGATGCTGTTGTAGCAGAGCTGTGAAAGGAA...GGCATTTTCCAGCTTCTGCCGTGTGCAGAGCGGGCAGCACGCTTTTACCCTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR GCA 90 bp TCTGAACCAAGAAAGGTTGAGAGCTCCAGGTATTGTGTGGAGAACATTCTGGAGCCTGGCCATCAGACCTaGCAGCAACAGTGGCAAGAG +
Preference number: 2 (lower is better)
Translates to: SEPRKVESSRYCVENILEPGHQT*QQQWQE
Trigger: CTCTTGCCACTGTTGCTGGCAGGTCTGATGGCCAGG...CTCCAGAATGTTCTCCACACAATACCTGGAGCTCTCAACCTTTCTTGGTTCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR GCA 90 bp TGTGCACGTGTCTCTGTGAGCACATTCACGGTGCATGCACCATTTTTGATGTCTACATTCTGGAGTCCCTaGAGGGGATGGATCTGCTGG +
Preference number: 2 (lower is better)
Translates to: CARVSVSTFTVHAPFLMSTFWSP*RGWICW
Trigger: CCAGCAGATCCATCCCCTGCAGGGACTCCAGAATGT...AGACATCAAAAATGGTGCATGCACCGTGAATGTGCTCACAGAGACACGTGCACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR CCA 90 bp CCCCTGTCTCCTCTCCCAAGTCCCAGAATCTCTTCCACTCAACTCTACACTGTGCAGCATAATGCAGACTaGGATGTCCACACAAGTGCT +
Preference number: 2 (lower is better)
Translates to: PLSPLPSPRISSTQLYTVQHNAD*DVHTSA
Trigger: AGCACTTGTGTGGACATCCCAGTCTGCATTATGCTG...CACAGTGTAGAGTTGAGTGGAAGAGATTCTGGGACTTGGGAGAGGAGACAGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR CCA 90 bp GGATTTTTGCTGTACCTTCCTGTTACCTGTTTGTGTGCAAAGTTGGAAAGCTGCAACCAAGAGCGGCAGTaGACAGGGTCGCCACTGGCT +
Preference number: 2 (lower is better)
Translates to: GFLLYLPVTCLCAKLESCNQERQ*TGSPLA
Trigger: AGCCAGTGGCGACCCTGTCCACTGCCGCTCTTGGTT...GCAGCTTTCCAACTTTGCACACAAACAGGTAACAGGAAGGTACAGCAAAAATCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR CCA 90 bp TCTGAACCAAGAAAGGTTGAGAGCTCCAGGTATTGTGTGGAGAACATTCTGGAGTCAGCCCACTGCCTTTaGGGCCTGTCCAGAACCACT +
Preference number: 2 (lower is better)
Translates to: SEPRKVESSRYCVENILESAHCL*GLSRTT
Trigger: AGTGGTTCTGGACAGGCCCCAAAGGCAGTGGGCTGA...CTCCAGAATGTTCTCCACACAATACCTGGAGCTCTCAACCTTTCTTGGTTCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR CCA 90 bp AACTTTTACAGCCACCCCTCTGGGAGTTGTACACACCTTTCAGTAGCCGAAGGGAAATACACACACCTTTaGCGCTGGCCACAAACCCAC +
Preference number: 2 (lower is better)
Translates to: NFYSHPSGSCTHLSVAEGKYTHL*RWPQTH
Trigger: GTGGGTTTGTGGCCAGCGCCAAAGGTGTGTGTATTT...CCCTTCGGCTACTGAAAGGTGTGTACAACTCCCAGAGGGGTGGCTGTAAAAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR CCA 90 bp CAAAGGGTAAAAGCGTGCTGCCCGCTCTGCACACGGCAGAAGCTGGAAAATGCCCACCTTTCCCATTTTTaGCGAACACACATAGGATGT +
Preference number: 2 (lower is better)
Translates to: QRVKACCPLCTRQKLENAHLSHF*RTHIGC
Trigger: ACATCCTATGTGTGTTCGCCAAAAATGGGAAAGGTG...GGCATTTTCCAGCTTCTGCCGTGTGCAGAGCGGGCAGCACGCTTTTACCCTTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR CCA 90 bp TGTGCACGTGTCTCTGTGAGCACATTCACGGTGCATGCACCATTTTTGATGTCTGATGTGACGCCCATGTaGGAATGTAATGGCCGCCTC +
Preference number: 2 (lower is better)
Translates to: CARVSVSTFTVHAPFLMSDVTPM*ECNGRL
Trigger: GAGGCGGCCATTACATTCCCACATGGGCGTCACATC...AGACATCAAAAATGGTGCATGCACCGTGAATGTGCTCACAGAGACACGTGCACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR CCA 90 bp TGTGCACGTGTCTCTGTGAGCACATTCACGGTGCATGCACCATTTTTGATGTCTGAACTGCAGGCCCCCTaGAATTTACCTGGCCATCAG +
Preference number: 2 (lower is better)
Translates to: CARVSVSTFTVHAPFLMSELQAP*NLPGHQ
Trigger: CTGATGGCCAGGTAAATTCCAGGGGGCCTGCAGTTC...AGACATCAAAAATGGTGCATGCACCGTGAATGTGCTCACAGAGACACGTGCACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR TCA 90 bp CAAAGGGTAAAAGCGTGCTGCCCGCTCTGCACACGGCAGAAGCTGGAAAATGCCCTAGGTTGGCGTTCATaGTTCAAGTATTTCAAGAGT +
Preference number: 2 (lower is better)
Translates to: QRVKACCPLCTRQKLENALGWRS*FKYFKS
Trigger: ACTCTTGAAATACTTGAATCATGAACGCCAACCTAG...GGCATTTTCCAGCTTCTGCCGTGTGCAGAGCGGGCAGCACGCTTTTACCCTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR TCA 90 bp CAAAGGGTAAAAGCGTGCTGCCCGCTCTGCACACGGCAGAAGCTGGAAAATGCCTTTTTGTTTTTAAAGTaGGGCTCCGTCAAGTCTTCC +
Preference number: 2 (lower is better)
Translates to: QRVKACCPLCTRQKLENAFLFLK*GSVKSS
Trigger: GGAAGACTTGACGGAGCCTCACTTTAAAAACAAAAA...GGCATTTTCCAGCTTCTGCCGTGTGCAGAGCGGGCAGCACGCTTTTACCCTTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR TCA 90 bp ACTAAAGCGGTTTTAGAGAAATTGCAGGCAGCAACCCCACCCACTCCCTTTACCAAACGTTTCTGTCAGTaGTGGCCTGGTGCTGTAACG +
Preference number: 2 (lower is better)
Translates to: TKAVLEKLQAATPPTPFTKRFCQ*WPGAVT
Trigger: CGTTACAGCACCAGGCCATCACTGACAGAAACGTTT...GGTAAAGGGAGTGGGTGGGGTTGCTGCCTGCAATTTCTCTAAAACCGCTTTAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR TCA 90 bp AACTGCAGGCCCCCTGGAATTTACCTGGCCATCAGACCTGCCAGCAACAGTGGCTGGAAAGGAACAAAGTaGTGGCATTCTCATCTATAT +
Preference number: 2 (lower is better)
Translates to: NCRPPGIYLAIRPASNSGWKGTK*WHSHLY
Trigger: ATATAGATGAGAATGCCATCACTTTGTTCCTTTCCA...GCCACTGTTGCTGGCAGGTCTGATGGCCAGGTAAATTCCAGGGGGCCTGCAGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR TCA 90 bp AACTTTTACAGCCACCCCTCTGGGAGTTGTACACACCTTTCAGTAGCCGAAGGGAGCTCTTCTCTTCCATaGCATCCTCACCATATCCTG +
Preference number: 2 (lower is better)
Translates to: NFYSHPSGSCTHLSVAEGSSSLP*HPHHIL
Trigger: CAGGATATGGTGAGGATGTCATGGAAGAGAAGAGCT...CCCTTCGGCTACTGAAAGGTGTGTACAACTCCCAGAGGGGTGGCTGTAAAAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR TCA 90 bp ACTTTCAGGTCAGCACGAGTGAAGCGTGGTTTCCTGAGCTTGAAGGGCTCTGAAAGCTCTTCTCTTCCATaGCATCCTCACCATATCCTG +
Preference number: 2 (lower is better)
Translates to: TFRSARVKRGFLSLKGSESSSLP*HPHHIL
Trigger: CAGGATATGGTGAGGATGTCATGGAAGAGAAGAGCT...TTCAGAGCCCTTCAAGCTCAGGAAACCACGCTTCACTCGTGCTGACCTGAAAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR TCA 90 bp CCCCTGTCTCCTCTCCCAAGTCCCAGAATCTCTTCCACTCAACTCTACACTGTGCTATGTAATGAGAGGTaGCCAGCAAGCCTGTATCTA +
Preference number: 2 (lower is better)
Translates to: PLSPLPSPRISSTQLYTVLCNER*PASLYL
Trigger: TAGATACAGGCTTGCTGGTCACCTCTCATTACATAG...CACAGTGTAGAGTTGAGTGGAAGAGATTCTGGGACTTGGGAGAGGAGACAGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR TCA 90 bp ACTTTCAGGTCAGCACGAGTGAAGCGTGGTTTCCTGAGCTTGAAGGGCTCTGAAGATACTGGATCTAATTaGCAGCAGAGGTCCTCTGTC +
Preference number: 2 (lower is better)
Translates to: TFRSARVKRGFLSLKGSEDTGSN*QQRSSV
Trigger: GACAGAGGACCTCTGCTGTCAATTAGATCCAGTATC...TTCAGAGCCCTTCAAGCTCAGGAAACCACGCTTCACTCGTGCTGACCTGAAAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR TCA 90 bp TGTGCACGTGTCTCTGTGAGCACATTCACGGTGCATGCACCATTTTTGATGTCTTCCAGGGTTGGGGACTaGGGGATCAGAGATGTTACA +
Preference number: 2 (lower is better)
Translates to: CARVSVSTFTVHAPFLMSSRVGD*GIRDVT
Trigger: TGTAACATCTCTGATCCCTCAGTCCCCAACCCTGGA...AGACATCAAAAATGGTGCATGCACCGTGAATGTGCTCACAGAGACACGTGCACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR TCA 90 bp GGGTTTATCTTAAAGATGGGGGCGAAGGGGGTGTCTGCAAAGAAGCAATTCAAAGCATCAACAGCAACGTaGTGTGACGCCCATGTGGGA +
Preference number: 2 (lower is better)
Translates to: GFILKMGAKGVSAKKQFKASTAT*CDAHVG
Trigger: TCCCACATGGGCGTCACATCACGTTGCTGTTGATGC...TTTGAATTGCTTCTTTGCAGACACCCCCTTCGCCCCCATCTTTAAGATAAACCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR GCA 90 bp GGATTTTTGCTGTACCTTCCTGTTACCTGTTTGTGTGCAAAGTTGGAAAGCTGCAGGAGCCTTGGGATATaGTCCTGGCCCAGGGACACT +
Preference number: 2 (lower is better)
Translates to: GFLLYLPVTCLCAKLESCRSLGI*SWPRDT
Trigger: AGTGTCCCTGGGCCAGGAGCATATCCCAAGGCTCCT...GCAGCTTTCCAACTTTGCACACAAACAGGTAACAGGAAGGTACAGCAAAAATCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR GCA 90 bp ACTTTCAGGTCAGCACGAGTGAAGCGTGGTTTCCTGAGCTTGAAGGGCTCTGAAAAGAAGCTGTGGTCATaGTTGGGAATTCTGACCCCT +
Preference number: 2 (lower is better)
Translates to: TFRSARVKRGFLSLKGSEKKLWS*LGILTP
Trigger: AGGGGTCAGAATTCCCAAGCATGACCACAGCTTCTT...TTCAGAGCCCTTCAAGCTCAGGAAACCACGCTTCACTCGTGCTGACCTGAAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR GCA 90 bp GGGTTTATCTTAAAGATGGGGGCGAAGGGGGTGTCTGCAAAGAAGCAATTCAAACATGTGCGTCCCCCTTaGTCAGGATGTCTGGGTGTA +
Preference number: 2 (lower is better)
Translates to: GFILKMGAKGVSAKKQFKHVRPP*SGCLGV
Trigger: TACACCCAGACATCCTGAGCAAGGGGGACGCACATG...TTTGAATTGCTTCTTTGCAGACACCCCCTTCGCCCCCATCTTTAAGATAAACCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR GCA 90 bp TTAAGGGTTTACATTGCAGGGGGAAATGTACCTCGAGGTATTATTTTGTGTGAGGCGTGCTGCCCGCTCTaGACACGGCAGAAGCTGGAA +
Preference number: 2 (lower is better)
Translates to: LRVYIAGGNVPRGIILCEACCPL*TRQKLE
Trigger: TTCCAGCTTCTGCCGTGTGCAGAGCGGGCAGCACGC...CTCACACAAAATAATACCTCGAGGTACATTTCCCCCTGCAATGTAAACCCTTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR GCA 90 bp GGATTTTTGCTGTACCTTCCTGTTACCTGTTTGTGTGCAAAGTTGGAAAGCTGCCAAAGGGTAAAAGCGTaGTGCCCGCTCTGCACACGG +
Preference number: 2 (lower is better)
Translates to: GFLLYLPVTCLCAKLESCQRVKA*CPLCTR
Trigger: CCGTGTGCAGAGCGGGCAGCACGCTTTTACCCTTTG...GCAGCTTTCCAACTTTGCACACAAACAGGTAACAGGAAGGTACAGCAAAAATCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR CCA 90 bp AATGAAGCTGAAGGAATCGAGTGGGAGGGACTGTTCTCCTCTTTGGGGGAGCTCAGTATCTTACATCTGTaGAGTGACTGGACCACACAC +
Preference number: 2 (lower is better)
Translates to: NEAEGIEWEGLFSSLGELSILHL*SDWTTH
Trigger: GTGTGTGGTCCAGTCACTCCACAGATGTAAGATACT...GAGCTCCCCCAAAGAGGAGAACAGTCCCTCCCACTCGATTCCTTCAGCTTCATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR CCA 90 bp CCCCTGTCTCCTCTCCCAAGTCCCAGAATCTCTTCCACTCAACTCTACACTGTGCAACCCACAGGAGTTTaGAAGAACCGATTGCTAACT +
Preference number: 2 (lower is better)
Translates to: PLSPLPSPRISSTQLYTVQPTGV*KNRLLT
Trigger: AGTTAGCAATCGGTTCTTCCAAACTCCTGTGGGTTG...CACAGTGTAGAGTTGAGTGGAAGAGATTCTGGGACTTGGGAGAGGAGACAGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR CCA 90 bp GGATTTTTGCTGTACCTTCCTGTTACCTGTTTGTGTGCAAAGTTGGAAAGCTGCTTCAGAGGCATGGGGTaGGGAGGTATGGTGAGCAGG +
Preference number: 2 (lower is better)
Translates to: GFLLYLPVTCLCAKLESCFRGMG*GGMVSR
Trigger: CCTGCTCACCATACCTCCCCACCCCATGCCTCTGAA...GCAGCTTTCCAACTTTGCACACAAACAGGTAACAGGAAGGTACAGCAAAAATCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR CCA 90 bp GGATTTTTGCTGTACCTTCCTGTTACCTGTTTGTGTGCAAAGTTGGAAAGCTGCGCTCTTGGACTAACGTaGGTCTGCGTCGCCTGGGTA +
Preference number: 2 (lower is better)
Translates to: GFLLYLPVTCLCAKLESCALGLT*VCVAWV
Trigger: TACCCAGGCGACGCAGACCCACGTTAGTCCAAGAGC...GCAGCTTTCCAACTTTGCACACAAACAGGTAACAGGAAGGTACAGCAAAAATCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR CCA 90 bp GGGTTTATCTTAAAGATGGGGGCGAAGGGGGTGTCTGCAAAGAAGCAATTCAAAACCTGCCAGCAACAGTaGCAAGAGGACTCAGAGGTC +
Preference number: 2 (lower is better)
Translates to: GFILKMGAKGVSAKKQFKTCQQQ*QEDSEV
Trigger: GACCTCTGAGTCCTCTTGCCACTGTTGCTGGCAGGT...TTTGAATTGCTTCTTTGCAGACACCCCCTTCGCCCCCATCTTTAAGATAAACCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR TCA 90 bp AACTTTTACAGCCACCCCTCTGGGAGTTGTACACACCTTTCAGTAGCCGAAGGGCCCCAACAATTCTTTTaGATTTCCCTCCCTCCCAAA +
Preference number: 2 (lower is better)
Translates to: NFYSHPSGSCTHLSVAEGPQQFF*ISLPPK
Trigger: TTTGGGAGGGAGGGAAATTCAAAAGAATTGTTGGGG...CCCTTCGGCTACTGAAAGGTGTGTACAACTCCCAGAGGGGTGGCTGTAAAAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR TCA 90 bp CCCCTGTCTCCTCTCCCAAGTCCCAGAATCTCTTCCACTCAACTCTACACTGTGTATCTGTGTGTTTCTTaGCTGTATGGACTCCCTGTA +
Preference number: 2 (lower is better)
Translates to: PLSPLPSPRISSTQLYTVYLCVS*LYGLPV
Trigger: TACAGGGAGTCCATACAGTCAAGAAACACACAGATA...CACAGTGTAGAGTTGAGTGGAAGAGATTCTGGGACTTGGGAGAGGAGACAGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR TCA 90 bp TGTGCACGTGTCTCTGTGAGCACATTCACGGTGCATGCACCATTTTTGATGTCTACAGCCAAAGCCACATaGGCACAAACATACAGACGG +
Preference number: 2 (lower is better)
Translates to: CARVSVSTFTVHAPFLMSTAKAT*AQTYRR
Trigger: CCGTCTGTATGTTTGTGCTCATGTGGCTTTGGCTGT...AGACATCAAAAATGGTGCATGCACCGTGAATGTGCTCACAGAGACACGTGCACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR GCA 90 bp ACTAAAGCGGTTTTAGAGAAATTGCAGGCAGCAACCCCACCCACTCCCTTTACCTTTTGGACTTGGCAGTaGTCCACTCTACTGCTAGGT +
Preference number: 2 (lower is better)
Translates to: TKAVLEKLQAATPPTPFTFWTWQ*STLLLG
Trigger: ACCTAGCAGTAGAGTGGAGCACTGCCAAGTCCAAAA...GGTAAAGGGAGTGGGTGGGGTTGCTGCCTGCAATTTCTCTAAAACCGCTTTAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR GCA 90 bp ACTTTCAGGTCAGCACGAGTGAAGCGTGGTTTCCTGAGCTTGAAGGGCTCTGAAACAGATACTCAGATGTaGCTGGTGGCCATTCACTTA +
Preference number: 2 (lower is better)
Translates to: TFRSARVKRGFLSLKGSETDTQM*LVAIHL
Trigger: TAAGTGAATGGCCACCAGGCACATCTGAGTATCTGT...TTCAGAGCCCTTCAAGCTCAGGAAACCACGCTTCACTCGTGCTGACCTGAAAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR GCA 90 bp CCCCTGTCTCCTCTCCCAAGTCCCAGAATCTCTTCCACTCAACTCTACACTGTGATGCTTTCAGGAGGCTaGTCACCACTTATTCTTTTC +
Preference number: 2 (lower is better)
Translates to: PLSPLPSPRISSTQLYTVMLSGG*SPLILF
Trigger: GAAAAGAATAAGTGGTGAGCAGCCTCCTGAAAGCAT...CACAGTGTAGAGTTGAGTGGAAGAGATTCTGGGACTTGGGAGAGGAGACAGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR GCA 90 bp TTAAGGGTTTACATTGCAGGGGGAAATGTACCTCGAGGTATTATTTTGTGTGAGTCAGTGATGGCCTGGTaGTGTAACGCGCCACGGCCT +
Preference number: 2 (lower is better)
Translates to: LRVYIAGGNVPRGIILCESVMAW*CNAPRP
Trigger: AGGCCGTGGCGCGTTACAGCACCAGGCCATCACTGA...CTCACACAAAATAATACCTCGAGGTACATTTCCCCCTGCAATGTAAACCCTTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR GCA 90 bp AATGAAGCTGAAGGAATCGAGTGGGAGGGACTGTTCTCCTCTTTGGGGGAGCTCCACTCACTTGAGTCATaGCTGTCAATCTCTTTTGAG +
Preference number: 2 (lower is better)
Translates to: NEAEGIEWEGLFSSLGELHSLES*LSISFE
Trigger: CTCAAAAGAGATTGACAGGCATGACTCAAGTGAGTG...GAGCTCCCCCAAAGAGGAGAACAGTCCCTCCCACTCGATTCCTTCAGCTTCATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR GCA 90 bp TGTGCACGTGTCTCTGTGAGCACATTCACGGTGCATGCACCATTTTTGATGTCTCCCACAGAGGGCTCATaGAGGCTTGTATATGTGAAC +
Preference number: 2 (lower is better)
Translates to: CARVSVSTFTVHAPFLMSPTEGS*RLVYVN
Trigger: GTTCACATATACAAGCCTGCATGAGCCCTCTGTGGG...AGACATCAAAAATGGTGCATGCACCGTGAATGTGCTCACAGAGACACGTGCACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR GCA 90 bp TTAAGGGTTTACATTGCAGGGGGAAATGTACCTCGAGGTATTATTTTGTGTGAGGCGGTCAGTGGGGGCTaGTGGAAGCAGAGCTTTTGC +
Preference number: 2 (lower is better)
Translates to: LRVYIAGGNVPRGIILCEAVSGG*WKQSFC
Trigger: GCAAAAGCTCTGCTTCCAGCAGCCCCCACTGACCGC...CTCACACAAAATAATACCTCGAGGTACATTTCCCCCTGCAATGTAAACCCTTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR CCA 90 bp TCTGAACCAAGAAAGGTTGAGAGCTCCAGGTATTGTGTGGAGAACATTCTGGAGAAAATAAAAAGCAGATaGGCCGGCCAGCCAGCCTGC +
Preference number: 2 (lower is better)
Translates to: SEPRKVESSRYCVENILEKIKSR*AGQPAC
Trigger: GCAGGCTGGCTGGCCGGCCCATCTGCTTTTTATTTT...CTCCAGAATGTTCTCCACACAATACCTGGAGCTCTCAACCTTTCTTGGTTCAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR CCA 90 bp AACTTTTACAGCCACCCCTCTGGGAGTTGTACACACCTTTCAGTAGCCGAAGGGTGGGCAGGTATTTGCTaGTACAAAATGTCGGCACTT +
Preference number: 2 (lower is better)
Translates to: NFYSHPSGSCTHLSVAEGWAGIC*YKMSAL
Trigger: AAGTGCCGACATTTTGTACCAGCAAATACCTGCCCA...CCCTTCGGCTACTGAAAGGTGTGTACAACTCCCAGAGGGGTGGCTGTAAAAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR CCA 90 bp TTAAGGGTTTACATTGCAGGGGGAAATGTACCTCGAGGTATTATTTTGTGTGAGAACCAAGAGCGGCAGTaGACAGGGTCGCCACTGGCT +
Preference number: 2 (lower is better)
Translates to: LRVYIAGGNVPRGIILCENQERQ*TGSPLA
Trigger: AGCCAGTGGCGACCCTGTCCACTGCCGCTCTTGGTT...CTCACACAAAATAATACCTCGAGGTACATTTCCCCCTGCAATGTAAACCCTTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR CCA 90 bp GGGTTTATCTTAAAGATGGGGGCGAAGGGGGTGTCTGCAAAGAAGCAATTCAAACAGAGGTCCTCTGTCTaGTGTGAGACACCCCTTTCT +
Preference number: 2 (lower is better)
Translates to: GFILKMGAKGVSAKKQFKQRSSV*CETPLS
Trigger: AGAAAGGGGTGTCTCACACCAGACAGAGGACCTCTG...TTTGAATTGCTTCTTTGCAGACACCCCCTTCGCCCCCATCTTTAAGATAAACCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR CCA 90 bp TCCCTAATGACTAAAGCTGACCGTCTGTTTGTTTGTATCCAACGGATAGCTTCTTGGGTGCTGAGCTGCTaGAGGAGTAGCTCTCCACTC +
Preference number: 2 (lower is better)
Translates to: SLMTKADRLFVCIQRIASWVLSC*RSSSPL
Trigger: GAGTGGAGAGCTACTCCTCCAGCAGCTCAGCACCCA...AGAAGCTATCCGTTGGATACAAACAAACAGACGGTCAGCTTTAGTCATTAGGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR CCA 90 bp TTAAGGGTTTACATTGCAGGGGGAAATGTACCTCGAGGTATTATTTTGTGTGAGCAATCACTCGGGATCTaGTCCCGGTGGCCACACGCA +
Preference number: 2 (lower is better)
Translates to: LRVYIAGGNVPRGIILCEQSLGI*SRWPHA
Trigger: TGCGTGTGGCCACCGGGACCAGATCCCGAGTGATTG...CTCACACAAAATAATACCTCGAGGTACATTTCCCCCTGCAATGTAAACCCTTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR CCA 90 bp GGGTTTATCTTAAAGATGGGGGCGAAGGGGGTGTCTGCAAAGAAGCAATTCAAAAGCACGAGTGAAGCGTaGTTTCCTGAGCTTGAAGGG +
Preference number: 2 (lower is better)
Translates to: GFILKMGAKGVSAKKQFKSTSEA*FPELEG
Trigger: CCCTTCAAGCTCAGGAAACCACGCTTCACTCGTGCT...TTTGAATTGCTTCTTTGCAGACACCCCCTTCGCCCCCATCTTTAAGATAAACCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR CCA 90 bp GGATTTTTGCTGTACCTTCCTGTTACCTGTTTGTGTGCAAAGTTGGAAAGCTGCGTGTGGAGAACATTCTaGAGTCCCTGCAGGGGATGG +
Preference number: 2 (lower is better)
Translates to: GFLLYLPVTCLCAKLESCVWRTF*SPCRGW
Trigger: CCATCCCCTGCAGGGACTCCAGAATGTTCTCCACAC...GCAGCTTTCCAACTTTGCACACAAACAGGTAACAGGAAGGTACAGCAAAAATCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR CCA 90 bp GCACCTCCACACTCTCCACACTCGAGACTTGCAGATGCACGTGTGACGGTGCCATCTTCGTATATGTTCTaGTGCATCTTTAATTCAGCA +
Preference number: 2 (lower is better)
Translates to: APPHSPHSRLADARVTVPSSYMF*CIFNSA
Trigger: TGCTGAATTAAAGATGCACCAGAACATATACGAAGA...TGGCACCGTCACACGTGCATCTGCAAGTCTCGAGTGTGGAGAGTGTGGAGGTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446273.1
3UTR CAA 90 bp TGTGCACGTGTCTCTGTGAGCACATTCACGGTGCATGCACCATTTTaGATGTCTTCTGTGAGATCACTGCATACACTTTGGTCACTGGTG +
Preference number: 2 (lower is better)
Translates to: CARVSVSTFTVHAPF*MSSVRSLHTLWSLV
Trigger: CACCAGTGACCAAAGTGTATGCAGTGATCTCACAGAAGACATCAAAAATGGTGCATGCACCGTGAATGTGCTCACAGAGACACGTGCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR TCA 90 bp ACTAAAGCGGTTTTAGAGAAATTGCAGGCAGCAACCCCACCCACTCCCTTTACCCCTTCTCTAGATGTCTaGATACAAGCTGCTCTTCAC +
Preference number: 2 (lower is better)
Translates to: TKAVLEKLQAATPPTPFTPSLDV*IQAALH
Trigger: GTGAAGAGCAGCTTGTATTCAGACATCTAGAGAAGG...GGTAAAGGGAGTGGGTGGGGTTGCTGCCTGCAATTTCTCTAAAACCGCTTTAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR TCA 90 bp CACACACATGTGCGTCCCCCTTGCTCAGGATGTCTGGGTGTATGTACGAAGGCATTTCAAAAGAATCCATaGTCGAGCTCTTACAAAGCT +
Preference number: 2 (lower is better)
Translates to: HTHVRPPCSGCLGVCTKAFQKNP*SSSYKA
Trigger: AGCTTTGTAAGAGCTCGATCATGGATTCTTTTGAAA...TGCCTTCGTACATACACCCAGACATCCTGAGCAAGGGGGACGCACATGTGTGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR TCA 90 bp TCTGAACCAAGAAAGGTTGAGAGCTCCAGGTATTGTGTGGAGAACATTCTGGAGAAGCTCCCAGCAAGTTaGCAAAAAGAAGGGGGAGGT +
Preference number: 2 (lower is better)
Translates to: SEPRKVESSRYCVENILEKLPAS*QKEGGG
Trigger: ACCTCCCCCTTCTTTTTGTCAACTTGCTGGGAGCTT...CTCCAGAATGTTCTCCACACAATACCTGGAGCTCTCAACCTTTCTTGGTTCAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR TCA 90 bp GGATTTTTGCTGTACCTTCCTGTTACCTGTTTGTGTGCAAAGTTGGAAAGCTGCTCCAGGGTTGGGGACTaGGGGATCAGAGATGTTACA +
Preference number: 2 (lower is better)
Translates to: GFLLYLPVTCLCAKLESCSRVGD*GIRDVT
Trigger: TGTAACATCTCTGATCCCTCAGTCCCCAACCCTGGA...GCAGCTTTCCAACTTTGCACACAAACAGGTAACAGGAAGGTACAGCAAAAATCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR TCA 90 bp ACTTTCAGGTCAGCACGAGTGAAGCGTGGTTTCCTGAGCTTGAAGGGCTCTGAAAAAGTTAACAGCCTATaGGCTTCTAGTTTCTGCGAG +
Preference number: 2 (lower is better)
Translates to: TFRSARVKRGFLSLKGSEKVNSL*ASSFCE
Trigger: CTCGCAGAAACTAGAAGCTCATAGGCTGTTAACTTT...TTCAGAGCCCTTCAAGCTCAGGAAACCACGCTTCACTCGTGCTGACCTGAAAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR TCA 90 bp TGTGCACGTGTCTCTGTGAGCACATTCACGGTGCATGCACCATTTTTGATGTCTGCGCAGCAGGGTTTGTaGGTTCCCTATTTTCTTAAC +
Preference number: 2 (lower is better)
Translates to: CARVSVSTFTVHAPFLMSAQQGL*VPYFLN
Trigger: GTTAAGAAAATAGGGAACTCACAAACCCTGCTGCGC...AGACATCAAAAATGGTGCATGCACCGTGAATGTGCTCACAGAGACACGTGCACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR TCA 90 bp AATGAAGCTGAAGGAATCGAGTGGGAGGGACTGTTCTCCTCTTTGGGGGAGCTCAATAGGGACCATTTCTaGAAATACACACACCTTTGG +
Preference number: 2 (lower is better)
Translates to: NEAEGIEWEGLFSSLGELNRDHF*KYTHLW
Trigger: CCAAAGGTGTGTGTATTTTCAGAAATGGTCCCTATT...GAGCTCCCCCAAAGAGGAGAACAGTCCCTCCCACTCGATTCCTTCAGCTTCATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR TCA 90 bp ACTTTCAGGTCAGCACGAGTGAAGCGTGGTTTCCTGAGCTTGAAGGGCTCTGAATCTTGCCTATTTATCTaGTCTTTCCCCTCCCATGAA +
Preference number: 2 (lower is better)
Translates to: TFRSARVKRGFLSLKGSESCLFI*SFPSHE
Trigger: TTCATGGGAGGGGAAAGATCAGATAAATAGGCAAGA...TTCAGAGCCCTTCAAGCTCAGGAAACCACGCTTCACTCGTGCTGACCTGAAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR TCA 90 bp GGGTTTATCTTAAAGATGGGGGCGAAGGGGGTGTCTGCAAAGAAGCAATTCAAAGCAATGCAGGCGCTATaGTTCATCACAGGCAAGATC +
Preference number: 2 (lower is better)
Translates to: GFILKMGAKGVSAKKQFKAMQAL*FITGKI
Trigger: GATCTTGCCTGTGATGAATCATAGCGCCTGCATTGC...TTTGAATTGCTTCTTTGCAGACACCCCCTTCGCCCCCATCTTTAAGATAAACCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR GCA 90 bp GGATTTTTGCTGTACCTTCCTGTTACCTGTTTGTGTGCAAAGTTGGAAAGCTGCACACCAGAACGAGCATaGCTGGGCAGTTACATGTGC +
Preference number: 2 (lower is better)
Translates to: GFLLYLPVTCLCAKLESCTPERA*LGSYMC
Trigger: GCACATGTAACTGCCCAGGCATGCTCGTTCTGGTGT...GCAGCTTTCCAACTTTGCACACAAACAGGTAACAGGAAGGTACAGCAAAAATCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR GCA 90 bp TCTGAACCAAGAAAGGTTGAGAGCTCCAGGTATTGTGTGGAGAACATTCTGGAGCCCACAGAGGGCTCATaGAGGCTTGTATATGTGAAC +
Preference number: 2 (lower is better)
Translates to: SEPRKVESSRYCVENILEPTEGS*RLVYVN
Trigger: GTTCACATATACAAGCCTGCATGAGCCCTCTGTGGG...CTCCAGAATGTTCTCCACACAATACCTGGAGCTCTCAACCTTTCTTGGTTCAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR GCA 90 bp GGGTTTATCTTAAAGATGGGGGCGAAGGGGGTGTCTGCAAAGAAGCAATTCAAATTAAATTCAGCCCACTaGCTTTGGGGCCTGTCCAGA +
Preference number: 2 (lower is better)
Translates to: GFILKMGAKGVSAKKQFKLNSAH*LWGLSR
Trigger: TCTGGACAGGCCCCAAAGGCAGTGGGCTGAATTTAA...TTTGAATTGCTTCTTTGCAGACACCCCCTTCGCCCCCATCTTTAAGATAAACCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR GCA 90 bp TGTGCACGTGTCTCTGTGAGCACATTCACGGTGCATGCACCATTTTTGATGTCTGCAAGCCTGTATCTATaGCAGAGTGTGGTAGAAGAG +
Preference number: 2 (lower is better)
Translates to: CARVSVSTFTVHAPFLMSASLYL*QSVVEE
Trigger: CTCTTCTACCACACTCTGGCATAGATACAGGCTTGC...AGACATCAAAAATGGTGCATGCACCGTGAATGTGCTCACAGAGACACGTGCACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR GCA 90 bp TTAAGGGTTTACATTGCAGGGGGAAATGTACCTCGAGGTATTATTTTGTGTGAGGTGTGGGTGCTGAGCTaGTGGAGGAGTAGCTCTCCA +
Preference number: 2 (lower is better)
Translates to: LRVYIAGGNVPRGIILCEVWVLS*WRSSSP
Trigger: TGGAGAGCTACTCCTCCAGCAGCTCAGCACCCACAC...CTCACACAAAATAATACCTCGAGGTACATTTCCCCCTGCAATGTAAACCCTTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR GCA 90 bp ACTTTCAGGTCAGCACGAGTGAAGCGTGGTTTCCTGAGCTTGAAGGGCTCTGAACAAATATTAGGGGTATaGCACAATCACTCGGGATCT +
Preference number: 2 (lower is better)
Translates to: TFRSARVKRGFLSLKGSEQILGV*HNHSGS
Trigger: AGATCCCGAGTGATTGTGGCATACCCCTAATATTTG...TTCAGAGCCCTTCAAGCTCAGGAAACCACGCTTCACTCGTGCTGACCTGAAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR GCA 90 bp AACTTTTACAGCCACCCCTCTGGGAGTTGTACACACCTTTCAGTAGCCGAAGGGCAAATATTAGGGGTATaGCACAATCACTCGGGATCT +
Preference number: 2 (lower is better)
Translates to: NFYSHPSGSCTHLSVAEGQILGV*HNHSGS
Trigger: AGATCCCGAGTGATTGTGGCATACCCCTAATATTTG...CCCTTCGGCTACTGAAAGGTGTGTACAACTCCCAGAGGGGTGGCTGTAAAAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR GCA 90 bp TTAAGGGTTTACATTGCAGGGGGAAATGTACCTCGAGGTATTATTTTGTGTGAGCAAAGGGTAAAAGCGTaGTGCCCGCTCTGCACACGG +
Preference number: 2 (lower is better)
Translates to: LRVYIAGGNVPRGIILCEQRVKA*CPLCTR
Trigger: CCGTGTGCAGAGCGGGCAGCACGCTTTTACCCTTTG...CTCACACAAAATAATACCTCGAGGTACATTTCCCCCTGCAATGTAAACCCTTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR GCA 90 bp TCTGAACCAAGAAAGGTTGAGAGCTCCAGGTATTGTGTGGAGAACATTCTGGAGTTGGTTGACAGGAACTaGAGGCCCCCTGGAATTTAC +
Preference number: 2 (lower is better)
Translates to: SEPRKVESSRYCVENILELVDRN*RPPGIY
Trigger: GTAAATTCCAGGGGGCCTGCAGTTCCTGTCAACCAA...CTCCAGAATGTTCTCCACACAATACCTGGAGCTCTCAACCTTTCTTGGTTCAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR GCA 90 bp TGTGCACGTGTCTCTGTGAGCACATTCACGGTGCATGCACCATTTTTGATGTCTAAAGAAGAGGCTGCATaGAGACCTCCCCTGTCAAAA +
Preference number: 2 (lower is better)
Translates to: CARVSVSTFTVHAPFLMSKEEAA*RPPLSK
Trigger: TTTTGACAGGGGAGGTCTGCATGCAGCCTCTTCTTT...AGACATCAAAAATGGTGCATGCACCGTGAATGTGCTCACAGAGACACGTGCACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR GCA 90 bp GGGTTTATCTTAAAGATGGGGGCGAAGGGGGTGTCTGCAAAGAAGCAATTCAAAGTTTACATACTGGTCTaGTGTCACTGTGTGGGAGGC +
Preference number: 2 (lower is better)
Translates to: GFILKMGAKGVSAKKQFKVYILV*CHCVGG
Trigger: GCCTCCCACACAGTGACAGCAGACCAGTATGTAAAC...TTTGAATTGCTTCTTTGCAGACACCCCCTTCGCCCCCATCTTTAAGATAAACCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR GCA 90 bp TGTGCACGTGTCTCTGTGAGCACATTCACGGTGCATGCACCATTTTTGATGTCTTTCCAAGGTGAACAGTaGCCAAATCAGAAGGTGGGT +
Preference number: 2 (lower is better)
Translates to: CARVSVSTFTVHAPFLMSFQGEQ*PNQKVG
Trigger: ACCCACCTTCTGATTTGGGCACTGTTCACCTTGGAA...AGACATCAAAAATGGTGCATGCACCGTGAATGTGCTCACAGAGACACGTGCACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR GCA 90 bp GGATTTTTGCTGTACCTTCCTGTTACCTGTTTGTGTGCAAAGTTGGAAAGCTGCGGGTGCAGAATCTTGTaGACGTGTCTCTGTGAGCAC +
Preference number: 2 (lower is better)
Translates to: GFLLYLPVTCLCAKLESCGCRIL*TCLCEH
Trigger: GTGCTCACAGAGACACGTGCACAAGATTCTGCACCC...GCAGCTTTCCAACTTTGCACACAAACAGGTAACAGGAAGGTACAGCAAAAATCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR CCA 90 bp AACTTTTACAGCCACCCCTCTGGGAGTTGTACACACCTTTCAGTAGCCGAAGGGCTTAATGCAGCCCAATaGAGTTGCTTTAGTAGCAGT +
Preference number: 2 (lower is better)
Translates to: NFYSHPSGSCTHLSVAEGLNAAQ*SCFSSS
Trigger: ACTGCTACTAAAGCAACTCCATTGGGCTGCATTAAG...CCCTTCGGCTACTGAAAGGTGTGTACAACTCCCAGAGGGGTGGCTGTAAAAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR CCA 90 bp TTAAGGGTTTACATTGCAGGGGGAAATGTACCTCGAGGTATTATTTTGTGTGAGCTGCTCTTCACCTGGTaGTCACCGCACGACAGCACT +
Preference number: 2 (lower is better)
Translates to: LRVYIAGGNVPRGIILCELLFTW*SPHDST
Trigger: AGTGCTGTCGTGCGGTGACCACCAGGTGAAGAGCAG...CTCACACAAAATAATACCTCGAGGTACATTTCCCCCTGCAATGTAAACCCTTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR CCA 90 bp TTAAGGGTTTACATTGCAGGGGGAAATGTACCTCGAGGTATTATTTTGTGTGAGAAGCTGCTCTTCACCTaGTGGTCACCGCACGACAGC +
Preference number: 2 (lower is better)
Translates to: LRVYIAGGNVPRGIILCEKLLFT*WSPHDS
Trigger: GCTGTCGTGCGGTGACCACCAGGTGAAGAGCAGCTT...CTCACACAAAATAATACCTCGAGGTACATTTCCCCCTGCAATGTAAACCCTTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR CCA 90 bp TCTGAACCAAGAAAGGTTGAGAGCTCCAGGTATTGTGTGGAGAACATTCTGGAGCTTGGGATATGCTCCTaGCCCAGGGACACTAAGATT +
Preference number: 2 (lower is better)
Translates to: SEPRKVESSRYCVENILELGICS*PRDTKI
Trigger: AATCTTAGTGTCCCTGGGCCAGGAGCATATCCCAAG...CTCCAGAATGTTCTCCACACAATACCTGGAGCTCTCAACCTTTCTTGGTTCAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR CCA 90 bp GGGTTTATCTTAAAGATGGGGGCGAAGGGGGTGTCTGCAAAGAAGCAATTCAAACTTGGGATATGCTCCTaGCCCAGGGACACTAAGATT +
Preference number: 2 (lower is better)
Translates to: GFILKMGAKGVSAKKQFKLGICS*PRDTKI
Trigger: AATCTTAGTGTCCCTGGGCCAGGAGCATATCCCAAG...TTTGAATTGCTTCTTTGCAGACACCCCCTTCGCCCCCATCTTTAAGATAAACCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR CCA 90 bp TCTGAACCAAGAAAGGTTGAGAGCTCCAGGTATTGTGTGGAGAACATTCTGGAGCCTTTCTTTTGTTGCTaGGGTTGTGGGGACAAGGAG +
Preference number: 2 (lower is better)
Translates to: SEPRKVESSRYCVENILEPFFCC*GCGDKE
Trigger: CTCCTTGTCCCCACAACCCCAGCAACAAAAGAAAGG...CTCCAGAATGTTCTCCACACAATACCTGGAGCTCTCAACCTTTCTTGGTTCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR CCA 90 bp CCCCTGTCTCCTCTCCCAAGTCCCAGAATCTCTTCCACTCAACTCTACACTGTGTCACAATTACACACCTaGAGGAATCAATGCACAGTA +
Preference number: 2 (lower is better)
Translates to: PLSPLPSPRISSTQLYTVSQLHT*RNQCTV
Trigger: TACTGTGCATTGATTCCTCCAGGTGTGTAATTGTGA...CACAGTGTAGAGTTGAGTGGAAGAGATTCTGGGACTTGGGAGAGGAGACAGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR CCA 90 bp CCCCTGTCTCCTCTCCCAAGTCCCAGAATCTCTTCCACTCAACTCTACACTGTGTCATGTCAGAAGAGGTaGGAAAATTCTTACAACAGG +
Preference number: 2 (lower is better)
Translates to: PLSPLPSPRISSTQLYTVSCQKR*ENSYNR
Trigger: CCTGTTGTAAGAATTTTCCCACCTCTTCTGACATGA...CACAGTGTAGAGTTGAGTGGAAGAGATTCTGGGACTTGGGAGAGGAGACAGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR CCA 90 bp CCCCTGTCTCCTCTCCCAAGTCCCAGAATCTCTTCCACTCAACTCTACACTGTGCATCTGAGGTCAAAATaGAATCTGGCTGTTAACCTT +
Preference number: 2 (lower is better)
Translates to: PLSPLPSPRISSTQLYTVHLRSK*NLAVNL
Trigger: AAGGTTAACAGCCAGATTCCATTTTGACCTCAGATG...CACAGTGTAGAGTTGAGTGGAAGAGATTCTGGGACTTGGGAGAGGAGACAGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR CCA 90 bp ACTTTCAGGTCAGCACGAGTGAAGCGTGGTTTCCTGAGCTTGAAGGGCTCTGAATGTTTCTTGACTGTATaGACTCCCTGTACTTGCAGA +
Preference number: 2 (lower is better)
Translates to: TFRSARVKRGFLSLKGSECFLTV*TPCTCR
Trigger: TCTGCAAGTACAGGGAGTCCATACAGTCAAGAAACA...TTCAGAGCCCTTCAAGCTCAGGAAACCACGCTTCACTCGTGCTGACCTGAAAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR CCA 90 bp TTAAGGGTTTACATTGCAGGGGGAAATGTACCTCGAGGTATTATTTTGTGTGAGTTCAGAGGCATGGGGTaGGGAGGTATGGTGAGCAGG +
Preference number: 2 (lower is better)
Translates to: LRVYIAGGNVPRGIILCEFRGMG*GGMVSR
Trigger: CCTGCTCACCATACCTCCCCACCCCATGCCTCTGAA...CTCACACAAAATAATACCTCGAGGTACATTTCCCCCTGCAATGTAAACCCTTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR CCA 90 bp GGGTTTATCTTAAAGATGGGGGCGAAGGGGGTGTCTGCAAAGAAGCAATTCAAATCCAACCCTGCTTCATaGGTGCCCAAATCTAGGCAA +
Preference number: 2 (lower is better)
Translates to: GFILKMGAKGVSAKKQFKSNPAS*VPKSRQ
Trigger: TTGCCTAGATTTGGGCACCCATGAAGCAGGGTTGGA...TTTGAATTGCTTCTTTGCAGACACCCCCTTCGCCCCCATCTTTAAGATAAACCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR CAA 90 bp GGAGGAGACGAAGGACAAGAGCAGAACAACAGGAACCCCTTCTATTaGCCCAAGACAAAGAGACTTTCCAAATCACTGCAGTTGTCACAA +
Preference number: 2 (lower is better)
Translates to: GGDEGQEQNNRNPFY*PKTKRLSKSLQLSQ
Trigger: TTGTGACAACTGCAGTGATTTGGAAAGTCTCTTTGTCTTGGGCAAATAGAAGGGGTTCCTGTTGTTCTGCTCTTGTCCTTCGTCTCCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR CAA 90 bp CCCAAGTCCCAGAATCTCTTCCACTCAACTCTACACTGTGCAATATaGATGCTAATGAAATCTCAACAGCTGCTCCTGGGACTTCCAGGA +
Preference number: 2 (lower is better)
Translates to: PKSQNLFHSTLHCAI*MLMKSQQLLLGLPG
Trigger: TCCTGGAAGTCCCAGGAGCAGCTGTTGAGATTTCATTAGCATCAATATTGCACAGTGTAGAGTTGAGTGGAAGAGATTCTGGGACTTGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR CAA 90 bp AAAGCGTGCTGCCCGCTCTGCACACGGCAGAAGCTGGAAAATGCCTaGTTTACATGCATGAATGTGTCACAAGTATCACCATATTCCAAT +
Preference number: 2 (lower is better)
Translates to: KACCPLCTRQKLENA*FTCMNVSQVSPYSN
Trigger: ATTGGAATATGGTGATACTTGTGACACATTCATGCATGTAAACAAGGCATTTTCCAGCTTCTGCCGTGTGCAGAGCGGGCAGCACGCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR TCA 90 bp AATGAAGCTGAAGGAATCGAGTGGGAGGGACTGTTCTCCTCTTTGGGGGAGCTCTTTCAAAAGAATCCATaGTCGAGCTCTTACAAAGCT +
Preference number: 2 (lower is better)
Translates to: NEAEGIEWEGLFSSLGELFQKNP*SSSYKA
Trigger: AGCTTTGTAAGAGCTCGATCATGGATTCTTTTGAAA...GAGCTCCCCCAAAGAGGAGAACAGTCCCTCCCACTCGATTCCTTCAGCTTCATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR TCA 90 bp AACTTTTACAGCCACCCCTCTGGGAGTTGTACACACCTTTCAGTAGCCGAAGGGAACATCACCAAAAACTaGAAGGAAACACTCCACATC +
Preference number: 2 (lower is better)
Translates to: NFYSHPSGSCTHLSVAEGNITKN*KETLHI
Trigger: GATGTGGAGTGTTTCCTTTCAGTTTTTGGTGATGTT...CCCTTCGGCTACTGAAAGGTGTGTACAACTCCCAGAGGGGTGGCTGTAAAAGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR TCA 90 bp TGTGCACGTGTCTCTGTGAGCACATTCACGGTGCATGCACCATTTTTGATGTCTCTATGTAATGAGAGGTaGCCAGCAAGCCTGTATCTA +
Preference number: 2 (lower is better)
Translates to: CARVSVSTFTVHAPFLMSLCNER*PASLYL
Trigger: TAGATACAGGCTTGCTGGTCACCTCTCATTACATAG...AGACATCAAAAATGGTGCATGCACCGTGAATGTGCTCACAGAGACACGTGCACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR TCA 90 bp ACTTTCAGGTCAGCACGAGTGAAGCGTGGTTTCCTGAGCTTGAAGGGCTCTGAAGTTAATGCATACACATaGAGTGTGACAAAACTTGGC +
Preference number: 2 (lower is better)
Translates to: TFRSARVKRGFLSLKGSEVNAYT*SVTKLG
Trigger: GCCAAGTTTTGTCACACTTCATGTGTATGCATTAAC...TTCAGAGCCCTTCAAGCTCAGGAAACCACGCTTCACTCGTGCTGACCTGAAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR TCA 90 bp AATGAAGCTGAAGGAATCGAGTGGGAGGGACTGTTCTCCTCTTTGGGGGAGCTCGTTATGACAAGAGACTaGCAGCTTAAAAACTACTCA +
Preference number: 2 (lower is better)
Translates to: NEAEGIEWEGLFSSLGELVMTRD*QLKNYS
Trigger: TGAGTAGTTTTTAAGCTGTCAGTCTCTTGTCATAAC...GAGCTCCCCCAAAGAGGAGAACAGTCCCTCCCACTCGATTCCTTCAGCTTCATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR TCA 90 bp GGATTTTTGCTGTACCTTCCTGTTACCTGTTTGTGTGCAAAGTTGGAAAGCTGCCTCCCTGTGTCTTCCTaGATGAAGCTGAAGGAATCG +
Preference number: 2 (lower is better)
Translates to: GFLLYLPVTCLCAKLESCLPVSS*MKLKES
Trigger: CGATTCCTTCAGCTTCATTCAGGAAGACACAGGGAG...GCAGCTTTCCAACTTTGCACACAAACAGGTAACAGGAAGGTACAGCAAAAATCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR TCA 90 bp GGATTTTTGCTGTACCTTCCTGTTACCTGTTTGTGTGCAAAGTTGGAAAGCTGCCCTCCTGCGTCTCTGTaGAGTGACTCCCATTATTCA +
Preference number: 2 (lower is better)
Translates to: GFLLYLPVTCLCAKLESCPPASL*SDSHYS
Trigger: TGAATAATGGGAGTCACTTCACAGAGACGCAGGAGG...GCAGCTTTCCAACTTTGCACACAAACAGGTAACAGGAAGGTACAGCAAAAATCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR GCA 90 bp GGATTTTTGCTGTACCTTCCTGTTACCTGTTTGTGTGCAAAGTTGGAAAGCTGCGCAGCCCAATGGAGTTaGTTTAGTAGCAGTGGCTCT +
Preference number: 2 (lower is better)
Translates to: GFLLYLPVTCLCAKLESCAAQWS*FSSSGS
Trigger: AGAGCCACTGCTACTAAAGCAACTCCATTGGGCTGC...GCAGCTTTCCAACTTTGCACACAAACAGGTAACAGGAAGGTACAGCAAAAATCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR GCA 90 bp AACTTTTACAGCCACCCCTCTGGGAGTTGTACACACCTTTCAGTAGCCGAAGGGTCGCTAAGTTATACCTaGCTAAGCAAAACCACATAC +
Preference number: 2 (lower is better)
Translates to: NFYSHPSGSCTHLSVAEGSLSYT*LSKTTY
Trigger: GTATGTGGTTTTGCTTAGGCAGGTATAACTTAGCGA...CCCTTCGGCTACTGAAAGGTGTGTACAACTCCCAGAGGGGTGGCTGTAAAAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR GCA 90 bp GGATTTTTGCTGTACCTTCCTGTTACCTGTTTGTGTGCAAAGTTGGAAAGCTGCTTAAATTCAGCCCACTaGCTTTGGGGCCTGTCCAGA +
Preference number: 2 (lower is better)
Translates to: GFLLYLPVTCLCAKLESCLNSAH*LWGLSR
Trigger: TCTGGACAGGCCCCAAAGGCAGTGGGCTGAATTTAA...GCAGCTTTCCAACTTTGCACACAAACAGGTAACAGGAAGGTACAGCAAAAATCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR GCA 90 bp GGGTTTATCTTAAAGATGGGGGCGAAGGGGGTGTCTGCAAAGAAGCAATTCAAAACCTGGAGGAATCAATaGACAGTAATGGAGGGCACA +
Preference number: 2 (lower is better)
Translates to: GFILKMGAKGVSAKKQFKTWRNQ*TVMEGT
Trigger: TGTGCCCTCCATTACTGTGCATTGATTCCTCCAGGT...TTTGAATTGCTTCTTTGCAGACACCCCCTTCGCCCCCATCTTTAAGATAAACCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR GCA 90 bp AATGAAGCTGAAGGAATCGAGTGGGAGGGACTGTTCTCCTCTTTGGGGGAGCTCGACTTTCCAAATCACTaGAGTTGTCACAATTACACA +
Preference number: 2 (lower is better)
Translates to: NEAEGIEWEGLFSSLGELDFPNH*SCHNYT
Trigger: TGTGTAATTGTGACAACTGCAGTGATTTGGAAAGTC...GAGCTCCCCCAAAGAGGAGAACAGTCCCTCCCACTCGATTCCTTCAGCTTCATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR GCA 90 bp ACTTTCAGGTCAGCACGAGTGAAGCGTGGTTTCCTGAGCTTGAAGGGCTCTGAATGTTATCACAGGGTCTaGACTAACTCTGGAAATCTA +
Preference number: 2 (lower is better)
Translates to: TFRSARVKRGFLSLKGSECYHRV*TNSGNL
Trigger: TAGATTTCCAGAGTTAGTGCAGACCCTGTGATAACA...TTCAGAGCCCTTCAAGCTCAGGAAACCACGCTTCACTCGTGCTGACCTGAAAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR GCA 90 bp TCTGAACCAAGAAAGGTTGAGAGCTCCAGGTATTGTGTGGAGAACATTCTGGAGGTGGAGTTCCATTGCTaGACTGGATTAACACTGCAC +
Preference number: 2 (lower is better)
Translates to: SEPRKVESSRYCVENILEVEFHC*TGLTLH
Trigger: GTGCAGTGTTAATCCAGTGCAGCAATGGAACTCCAC...CTCCAGAATGTTCTCCACACAATACCTGGAGCTCTCAACCTTTCTTGGTTCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR GCA 90 bp TCTGAACCAAGAAAGGTTGAGAGCTCCAGGTATTGTGTGGAGAACATTCTGGAGTGCAGGGGATGGATCTaGTGGAAGAGAGAAATTCAG +
Preference number: 2 (lower is better)
Translates to: SEPRKVESSRYCVENILECRGWI*WKREIQ
Trigger: CTGAATTTCTCTCTTCCAGCAGATCCATCCCCTGCA...CTCCAGAATGTTCTCCACACAATACCTGGAGCTCTCAACCTTTCTTGGTTCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR CCA 90 bp TTAAGGGTTTACATTGCAGGGGGAAATGTACCTCGAGGTATTATTTTGTGTGAGGGGAATTCTGACCCCTaGCCCCAGGAGGGAATACAA +
Preference number: 2 (lower is better)
Translates to: LRVYIAGGNVPRGIILCEGNSDP*PQEGIQ
Trigger: TTGTATTCCCTCCTGGGGCCAGGGGTCAGAATTCCC...CTCACACAAAATAATACCTCGAGGTACATTTCCCCCTGCAATGTAAACCCTTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR CCA 90 bp TCCCTAATGACTAAAGCTGACCGTCTGTTTGTTTGTATCCAACGGATAGCTTCTCTTTACCTGTCGAGCTaGAGTTTCCTTCCCACTGGG +
Preference number: 2 (lower is better)
Translates to: SLMTKADRLFVCIQRIASLYLSS*SFLPTG
Trigger: CCCAGTGGGAAGGAAACTCCAGCTCGACAGGTAAAG...AGAAGCTATCCGTTGGATACAAACAAACAGACGGTCAGCTTTAGTCATTAGGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR CCA 90 bp TGTGCACGTGTCTCTGTGAGCACATTCACGGTGCATGCACCATTTTTGATGTCTAGTATCTTACATCTGTaGAGTGACTGGACCACACAC +
Preference number: 2 (lower is better)
Translates to: CARVSVSTFTVHAPFLMSSILHL*SDWTTH
Trigger: GTGTGTGGTCCAGTCACTCCACAGATGTAAGATACT...AGACATCAAAAATGGTGCATGCACCGTGAATGTGCTCACAGAGACACGTGCACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR CCA 90 bp ACTTTCAGGTCAGCACGAGTGAAGCGTGGTTTCCTGAGCTTGAAGGGCTCTGAAACACAGGAAGGAACTTaGCATTCTACATTACTGAGA +
Preference number: 2 (lower is better)
Translates to: TFRSARVKRGFLSLKGSETQEGT*HSTLLR
Trigger: TCTCAGTAATGTAGAATGCCAAGTTCCTTCCTGTGT...TTCAGAGCCCTTCAAGCTCAGGAAACCACGCTTCACTCGTGCTGACCTGAAAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR CCA 90 bp ACTTTCAGGTCAGCACGAGTGAAGCGTGGTTTCCTGAGCTTGAAGGGCTCTGAATCACAATTACACACCTaGAGGAATCAATGCACAGTA +
Preference number: 2 (lower is better)
Translates to: TFRSARVKRGFLSLKGSESQLHT*RNQCTV
Trigger: TACTGTGCATTGATTCCTCCAGGTGTGTAATTGTGA...TTCAGAGCCCTTCAAGCTCAGGAAACCACGCTTCACTCGTGCTGACCTGAAAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR CCA 90 bp TCCCTAATGACTAAAGCTGACCGTCTGTTTGTTTGTATCCAACGGATAGCTTCTAAACACGTCCAGGGTTaGGGACTGAGGGATCAGAGA +
Preference number: 2 (lower is better)
Translates to: SLMTKADRLFVCIQRIASKHVQG*GLRDQR
Trigger: TCTCTGATCCCTCAGTCCCCAACCCTGGACGTGTTT...AGAAGCTATCCGTTGGATACAAACAAACAGACGGTCAGCTTTAGTCATTAGGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR CCA 90 bp TTAAGGGTTTACATTGCAGGGGGAAATGTACCTCGAGGTATTATTTTGTGTGAGCCCCTGGAATTTACCTaGCCATCAGACCTGCCAGCA +
Preference number: 2 (lower is better)
Translates to: LRVYIAGGNVPRGIILCEPLEFT*PSDLPA
Trigger: TGCTGGCAGGTCTGATGGCCAGGTAAATTCCAGGGG...CTCACACAAAATAATACCTCGAGGTACATTTCCCCCTGCAATGTAAACCCTTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR CCA 90 bp TTAAGGGTTTACATTGCAGGGGGAAATGTACCTCGAGGTATTATTTTGTGTGAGGAACTGCAGGCCCCCTaGAATTTACCTGGCCATCAG +
Preference number: 2 (lower is better)
Translates to: LRVYIAGGNVPRGIILCEELQAP*NLPGHQ
Trigger: CTGATGGCCAGGTAAATTCCAGGGGGCCTGCAGTTC...CTCACACAAAATAATACCTCGAGGTACATTTCCCCCTGCAATGTAAACCCTTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR CCA 90 bp TGTGCACGTGTCTCTGTGAGCACATTCACGGTGCATGCACCATTTTTGATGTCTTTTTCCAGAGAACACTaGAGCCTGTGGAGTTCCATT +
Preference number: 2 (lower is better)
Translates to: CARVSVSTFTVHAPFLMSFSREH*SLWSSI
Trigger: AATGGAACTCCACAGGCTCCAGTGTTCTCTGGAAAA...AGACATCAAAAATGGTGCATGCACCGTGAATGTGCTCACAGAGACACGTGCACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR CCA 90 bp TGTGCACGTGTCTCTGTGAGCACATTCACGGTGCATGCACCATTTTTGATGTCTTCACTGCATACACTTTaGTCACTGGTGTGTGCAAAG +
Preference number: 2 (lower is better)
Translates to: CARVSVSTFTVHAPFLMSSLHTL*SLVCAK
Trigger: CTTTGCACACACCAGTGACCAAAGTGTATGCAGTGA...AGACATCAAAAATGGTGCATGCACCGTGAATGTGCTCACAGAGACACGTGCACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR TCA 90 bp TCTGAACCAAGAAAGGTTGAGAGCTCCAGGTATTGTGTGGAGAACATTCTGGAGCCTTCTCTAGATGTCTaGATACAAGCTGCTCTTCAC +
Preference number: 2 (lower is better)
Translates to: SEPRKVESSRYCVENILEPSLDV*IQAALH
Trigger: GTGAAGAGCAGCTTGTATTCAGACATCTAGAGAAGG...CTCCAGAATGTTCTCCACACAATACCTGGAGCTCTCAACCTTTCTTGGTTCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR TCA 90 bp ACTTTCAGGTCAGCACGAGTGAAGCGTGGTTTCCTGAGCTTGAAGGGCTCTGAATTTCAAAAGAATCCATaGTCGAGCTCTTACAAAGCT +
Preference number: 2 (lower is better)
Translates to: TFRSARVKRGFLSLKGSEFQKNP*SSSYKA
Trigger: AGCTTTGTAAGAGCTCGATCATGGATTCTTTTGAAA...TTCAGAGCCCTTCAAGCTCAGGAAACCACGCTTCACTCGTGCTGACCTGAAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR TCA 90 bp TGTGCACGTGTCTCTGTGAGCACATTCACGGTGCATGCACCATTTTTGATGTCTAACGACCATGAGGTCTaGAGACTGACAATTCATTGT +
Preference number: 2 (lower is better)
Translates to: CARVSVSTFTVHAPFLMSNDHEV*RLTIHC
Trigger: ACAATGAATTGTCAGTCTTCAGACCTCATGGTCGTT...AGACATCAAAAATGGTGCATGCACCGTGAATGTGCTCACAGAGACACGTGCACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR TCA 90 bp TCCCTAATGACTAAAGCTGACCGTCTGTTTGTTTGTATCCAACGGATAGCTTCTGGCGGTAGGAGGTTATaGCAAGAGACTGACAGCTTA +
Preference number: 2 (lower is better)
Translates to: SLMTKADRLFVCIQRIASGGRRL*QETDSL
Trigger: TAAGCTGTCAGTCTCTTGTCATAACCTCCTACCGCC...AGAAGCTATCCGTTGGATACAAACAAACAGACGGTCAGCTTTAGTCATTAGGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR TCA 90 bp TGTGCACGTGTCTCTGTGAGCACATTCACGGTGCATGCACCATTTTTGATGTCTGTCACAGTGAAGAACTaGAGACTGAGCTTTTTGCAA +
Preference number: 2 (lower is better)
Translates to: CARVSVSTFTVHAPFLMSVTVKN*RLSFLQ
Trigger: TTGCAAAAAGCTCAGTCTTCAGTTCTTCACTGTGAC...AGACATCAAAAATGGTGCATGCACCGTGAATGTGCTCACAGAGACACGTGCACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR TCA 90 bp TGTGCACGTGTCTCTGTGAGCACATTCACGGTGCATGCACCATTTTTGATGTCTACCATCCCAACTTGTTaGTATTGGCTAGATATGGGT +
Preference number: 2 (lower is better)
Translates to: CARVSVSTFTVHAPFLMSTIPTC*YWLDMG
Trigger: ACCCATATCTAGCCAATATCAACAAGTTGGGATGGT...AGACATCAAAAATGGTGCATGCACCGTGAATGTGCTCACAGAGACACGTGCACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR TCA 90 bp GGGTTTATCTTAAAGATGGGGGCGAAGGGGGTGTCTGCAAAGAAGCAATTCAAAGCTGACAGATCCACATaGGCAGCATTTGTTAAAAGC +
Preference number: 2 (lower is better)
Translates to: GFILKMGAKGVSAKKQFKADRST*AAFVKS
Trigger: GCTTTTAACAAATGCTGCTCATGTGGATCTGTCAGC...TTTGAATTGCTTCTTTGCAGACACCCCCTTCGCCCCCATCTTTAAGATAAACCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR GCA 90 bp TGTGCACGTGTCTCTGTGAGCACATTCACGGTGCATGCACCATTTTTGATGTCTGGAACCCCTTCTATTTaGCCAAGACAAAGAGACTTT +
Preference number: 2 (lower is better)
Translates to: CARVSVSTFTVHAPFLMSGTPSI*PRQRDF
Trigger: AAAGTCTCTTTGTCTTGGGCAAATAGAAGGGGTTCC...AGACATCAAAAATGGTGCATGCACCGTGAATGTGCTCACAGAGACACGTGCACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR GCA 90 bp TGTGCACGTGTCTCTGTGAGCACATTCACGGTGCATGCACCATTTTTGATGTCTAGTAGACATGGCTCTTaGCAAAGAATACCACGGAAA +
Preference number: 2 (lower is better)
Translates to: CARVSVSTFTVHAPFLMSSRHGS*QRIPRK
Trigger: TTTCCGTGGTATTCTTTGGCAAGAGCCATGTCTACT...AGACATCAAAAATGGTGCATGCACCGTGAATGTGCTCACAGAGACACGTGCACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR GCA 90 bp AATGAAGCTGAAGGAATCGAGTGGGAGGGACTGTTCTCCTCTTTGGGGGAGCTCTTTGGAACCTTAACTTaGAACACTGCTAAGTTAACT +
Preference number: 2 (lower is better)
Translates to: NEAEGIEWEGLFSSLGELFGTLT*NTAKLT
Trigger: AGTTAACTTAGCAGTGTTGCAAGTTAAGGTTCCAAA...GAGCTCCCCCAAAGAGGAGAACAGTCCCTCCCACTCGATTCCTTCAGCTTCATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR GCA 90 bp AACTTTTACAGCCACCCCTCTGGGAGTTGTACACACCTTTCAGTAGCCGAAGGGCCGATTGCTAACTTATaGTACATTCATGTCAGAAGA +
Preference number: 2 (lower is better)
Translates to: NFYSHPSGSCTHLSVAEGPIANL*YIHVRR
Trigger: TCTTCTGACATGAATGTAGCATAAGTTAGCAATCGG...CCCTTCGGCTACTGAAAGGTGTGTACAACTCCCAGAGGGGTGGCTGTAAAAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR GCA 90 bp GGATTTTTGCTGTACCTTCCTGTTACCTGTTTGTGTGCAAAGTTGGAAAGCTGCCCTCCCCACCCCCTTTaGAGAATGCATAGTTACAAT +
Preference number: 2 (lower is better)
Translates to: GFLLYLPVTCLCAKLESCPPHPL*RMHSYN
Trigger: ATTGTAACTATGCATTCTGCAAAGGGGGTGGGGAGG...GCAGCTTTCCAACTTTGCACACAAACAGGTAACAGGAAGGTACAGCAAAAATCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR GCA 90 bp GGATTTTTGCTGTACCTTCCTGTTACCTGTTTGTGTGCAAAGTTGGAAAGCTGCCCTAGACCAGAGCAATaGAGGCGCTATGATTCATCA +
Preference number: 2 (lower is better)
Translates to: GFLLYLPVTCLCAKLESCPRPEQ*RRYDSS
Trigger: TGATGAATCATAGCGCCTGCATTGCTCTGGTCTAGG...GCAGCTTTCCAACTTTGCACACAAACAGGTAACAGGAAGGTACAGCAAAAATCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR GCA 90 bp TCTGAACCAAGAAAGGTTGAGAGCTCCAGGTATTGTGTGGAGAACATTCTGGAGGTTAAGGGTTTACATTaGAGGGGGAAATGTACCTCG +
Preference number: 2 (lower is better)
Translates to: SEPRKVESSRYCVENILEVKGLH*RGKCTS
Trigger: CGAGGTACATTTCCCCCTGCAATGTAAACCCTTAAC...CTCCAGAATGTTCTCCACACAATACCTGGAGCTCTCAACCTTTCTTGGTTCAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR GCA 90 bp TCTGACGACTGGCCTCTGATATATACAGGACAATCCAAGCTTTGGTGGAAAAGAACGGGTGCATCTTCATaGATGTTTGTCTACGTGGGT +
Preference number: 2 (lower is better)
Translates to: SDDWPLIYTGQSKLWWKRTGASS*MFVYVG
Trigger: ACCCACGTAGACAAACATGCATGAAGATGCACCCGT...TCTTTTCCACCAAAGCTTGGATTGTCCTGTATATATCAGAGGCCAGTCGTCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446273.1
3UTR-3UTR CCA 90 bp TTAAGGGTTTACATTGCAGGGGGAAATGTACCTCGAGGTATTATTTTGTGTGAGAAAATAAAAAGCAGATaGGCCGGCCAGCCAGCCTGC +
Preference number: 2 (lower is better)
Translates to: LRVYIAGGNVPRGIILCEKIKSR*AGQPAC
Trigger: GCAGGCTGGCTGGCCGGCCCATCTGCTTTTTATTTT...CTCACACAAAATAATACCTCGAGGTACATTTCCCCCTGCAATGTAAACCCTTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR CCA 90 bp GGGTTTATCTTAAAGATGGGGGCGAAGGGGGTGTCTGCAAAGAAGCAATTCAAATGGGCAGGTATTTGCTaGTACAAAATGTCGGCACTT +
Preference number: 2 (lower is better)
Translates to: GFILKMGAKGVSAKKQFKWAGIC*YKMSAL
Trigger: AAGTGCCGACATTTTGTACCAGCAAATACCTGCCCA...TTTGAATTGCTTCTTTGCAGACACCCCCTTCGCCCCCATCTTTAAGATAAACCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR CCA 90 bp CCCCTGTCTCCTCTCCCAAGTCCCAGAATCTCTTCCACTCAACTCTACACTGTGGGTCAAAATGGAATCTaGCTGTTAACCTTACAAAAA +
Preference number: 2 (lower is better)
Translates to: PLSPLPSPRISSTQLYTVGQNGI*LLTLQK
Trigger: TTTTTGTAAGGTTAACAGCCAGATTCCATTTTGACC...CACAGTGTAGAGTTGAGTGGAAGAGATTCTGGGACTTGGGAGAGGAGACAGGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR CCA 90 bp TGTGCACGTGTCTCTGTGAGCACATTCACGGTGCATGCACCATTTTTGATGTCTAGAGAAAAACAGGCTTaGCGTAAGCATTTTGCTCAG +
Preference number: 2 (lower is better)
Translates to: CARVSVSTFTVHAPFLMSREKQA*RKHFAQ
Trigger: CTGAGCAAAATGCTTACGCCAAGCCTGTTTTTCTCT...AGACATCAAAAATGGTGCATGCACCGTGAATGTGCTCACAGAGACACGTGCACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR CCA 90 bp TCCCTAATGACTAAAGCTGACCGTCTGTTTGTTTGTATCCAACGGATAGCTTCTCACCTCGTAGGTTCATaGCCTCTTTCTTCAGAGGCA +
Preference number: 2 (lower is better)
Translates to: SLMTKADRLFVCIQRIASHLVGS*PLSSEA
Trigger: TGCCTCTGAAGAAAGAGGCCATGAACCTACGAGGTG...AGAAGCTATCCGTTGGATACAAACAAACAGACGGTCAGCTTTAGTCATTAGGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR CCA 90 bp GGATTTTTGCTGTACCTTCCTGTTACCTGTTTGTGTGCAAAGTTGGAAAGCTGCACAGGGTTTACATACTaGTCTGCTGTCACTGTGTGG +
Preference number: 2 (lower is better)
Translates to: GFLLYLPVTCLCAKLESCTGFTY*SAVTVW
Trigger: CCACACAGTGACAGCAGACCAGTATGTAAACCCTGT...GCAGCTTTCCAACTTTGCACACAAACAGGTAACAGGAAGGTACAGCAAAAATCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR TCA 90 bp TCCCTAATGACTAAAGCTGACCGTCTGTTTGTTTGTATCCAACGGATAGCTTCTGATACTGGATCTAATTaGCAGCAGAGGTCCTCTGTC +
Preference number: 2 (lower is better)
Translates to: SLMTKADRLFVCIQRIASDTGSN*QQRSSV
Trigger: GACAGAGGACCTCTGCTGTCAATTAGATCCAGTATC...AGAAGCTATCCGTTGGATACAAACAAACAGACGGTCAGCTTTAGTCATTAGGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR TCA 90 bp GGGTTTATCTTAAAGATGGGGGCGAAGGGGGTGTCTGCAAAGAAGCAATTCAAATATGAATGTTGTAAATaGAACACGTCCAGGGTTGGG +
Preference number: 2 (lower is better)
Translates to: GFILKMGAKGVSAKKQFKYECCK*NTSRVG
Trigger: CCCAACCCTGGACGTGTTTCATTTACAACATTCATA...TTTGAATTGCTTCTTTGCAGACACCCCCTTCGCCCCCATCTTTAAGATAAACCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR TCA 90 bp TGTGCACGTGTCTCTGTGAGCACATTCACGGTGCATGCACCATTTTTGATGTCTGTTAATGCATACACATaGAGTGTGACAAAACTTGGC +
Preference number: 2 (lower is better)
Translates to: CARVSVSTFTVHAPFLMSVNAYT*SVTKLG
Trigger: GCCAAGTTTTGTCACACTTCATGTGTATGCATTAAC...AGACATCAAAAATGGTGCATGCACCGTGAATGTGCTCACAGAGACACGTGCACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR TCA 90 bp GGGTTTATCTTAAAGATGGGGGCGAAGGGGGTGTCTGCAAAGAAGCAATTCAAAAACGACCATGAGGTCTaGAGACTGACAATTCATTGT +
Preference number: 2 (lower is better)
Translates to: GFILKMGAKGVSAKKQFKNDHEV*RLTIHC
Trigger: ACAATGAATTGTCAGTCTTCAGACCTCATGGTCGTT...TTTGAATTGCTTCTTTGCAGACACCCCCTTCGCCCCCATCTTTAAGATAAACCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR TCA 90 bp TCTGAACCAAGAAAGGTTGAGAGCTCCAGGTATTGTGTGGAGAACATTCTGGAGGTCACAGTGAAGAACTaGAGACTGAGCTTTTTGCAA +
Preference number: 2 (lower is better)
Translates to: SEPRKVESSRYCVENILEVTVKN*RLSFLQ
Trigger: TTGCAAAAAGCTCAGTCTTCAGTTCTTCACTGTGAC...CTCCAGAATGTTCTCCACACAATACCTGGAGCTCTCAACCTTTCTTGGTTCAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR TCA 90 bp GGGTTTATCTTAAAGATGGGGGCGAAGGGGGTGTCTGCAAAGAAGCAATTCAAATCTTGCCTATTTATCTaGTCTTTCCCCTCCCATGAA +
Preference number: 2 (lower is better)
Translates to: GFILKMGAKGVSAKKQFKSCLFI*SFPSHE
Trigger: TTCATGGGAGGGGAAAGATCAGATAAATAGGCAAGA...TTTGAATTGCTTCTTTGCAGACACCCCCTTCGCCCCCATCTTTAAGATAAACCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR TCA 90 bp TGTGCACGTGTCTCTGTGAGCACATTCACGGTGCATGCACCATTTTTGATGTCTTTTTGCAGCTTACTGTaGGCAGTAAAGAGGAATTTC +
Preference number: 2 (lower is better)
Translates to: CARVSVSTFTVHAPFLMSFCSLL*AVKRNF
Trigger: GAAATTCCTCTTTACTGCTCACAGTAAGCTGCAAAA...AGACATCAAAAATGGTGCATGCACCGTGAATGTGCTCACAGAGACACGTGCACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR TCA 90 bp GGGTTTATCTTAAAGATGGGGGCGAAGGGGGTGTCTGCAAAGAAGCAATTCAAAAAAAGGATAATCCACTaGTGTCAGAAAGGAGAGAGG +
Preference number: 2 (lower is better)
Translates to: GFILKMGAKGVSAKKQFKKRIIH*CQKGER
Trigger: CCTCTCTCCTTTCTGACATCAGTGGATTATCCTTTT...TTTGAATTGCTTCTTTGCAGACACCCCCTTCGCCCCCATCTTTAAGATAAACCC
44% GC, longest homopolymer 7 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR TCA 90 bp GGATTTTTGCTGTACCTTCCTGTTACCTGTTTGTGTGCAAAGTTGGAAAGCTGCAGGAGTGGGAACAGTTaGGCTGTTGTATCTGCTTTT +
Preference number: 2 (lower is better)
Translates to: GFLLYLPVTCLCAKLESCRSGNS*AVVSAF
Trigger: AAAAGCAGATACAACAGCTCAACTGTTCCCACTCCT...GCAGCTTTCCAACTTTGCACACAAACAGGTAACAGGAAGGTACAGCAAAAATCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR GCA 90 bp TCCCTAATGACTAAAGCTGACCGTCTGTTTGTTTGTATCCAACGGATAGCTTCTAGGGAGGCAACTATGTaGTCAGACAGTCTGTCAATG +
Preference number: 2 (lower is better)
Translates to: SLMTKADRLFVCIQRIASREATM*SDSLSM
Trigger: CATTGACAGACTGTCTGAGCACATAGTTGCCTCCCT...AGAAGCTATCCGTTGGATACAAACAAACAGACGGTCAGCTTTAGTCATTAGGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR GCA 90 bp TCCCTAATGACTAAAGCTGACCGTCTGTTTGTTTGTATCCAACGGATAGCTTCTAGAGACAGAGAAGGATaGACGCGAATGCACATGAAC +
Preference number: 2 (lower is better)
Translates to: SLMTKADRLFVCIQRIASRDREG*TRMHMN
Trigger: GTTCATGTGCATTCGCGTGCATCCTTCTCTGTCTCT...AGAAGCTATCCGTTGGATACAAACAAACAGACGGTCAGCTTTAGTCATTAGGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR GCA 90 bp TTAAGGGTTTACATTGCAGGGGGAAATGTACCTCGAGGTATTATTTTGTGTGAGGCAGCCCAATGGAGTTaGTTTAGTAGCAGTGGCTCT +
Preference number: 2 (lower is better)
Translates to: LRVYIAGGNVPRGIILCEAAQWS*FSSSGS
Trigger: AGAGCCACTGCTACTAAAGCAACTCCATTGGGCTGC...CTCACACAAAATAATACCTCGAGGTACATTTCCCCCTGCAATGTAAACCCTTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR GCA 90 bp TCCCTAATGACTAAAGCTGACCGTCTGTTTGTTTGTATCCAACGGATAGCTTCTTTTTGGACTTGGCAGTaGTCCACTCTACTGCTAGGT +
Preference number: 2 (lower is better)
Translates to: SLMTKADRLFVCIQRIASFWTWQ*STLLLG
Trigger: ACCTAGCAGTAGAGTGGAGCACTGCCAAGTCCAAAA...AGAAGCTATCCGTTGGATACAAACAAACAGACGGTCAGCTTTAGTCATTAGGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR GCA 90 bp TCCCTAATGACTAAAGCTGACCGTCTGTTTGTTTGTATCCAACGGATAGCTTCTAAGAAGCTGTGGTCATaGTTGGGAATTCTGACCCCT +
Preference number: 2 (lower is better)
Translates to: SLMTKADRLFVCIQRIASKKLWS*LGILTP
Trigger: AGGGGTCAGAATTCCCAAGCATGACCACAGCTTCTT...AGAAGCTATCCGTTGGATACAAACAAACAGACGGTCAGCTTTAGTCATTAGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR GCA 90 bp TCTGAACCAAGAAAGGTTGAGAGCTCCAGGTATTGTGTGGAGAACATTCTGGAGAGTAGACATGGCTCTTaGCAAAGAATACCACGGAAA +
Preference number: 2 (lower is better)
Translates to: SEPRKVESSRYCVENILESRHGS*QRIPRK
Trigger: TTTCCGTGGTATTCTTTGGCAAGAGCCATGTCTACT...CTCCAGAATGTTCTCCACACAATACCTGGAGCTCTCAACCTTTCTTGGTTCAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR GCA 90 bp GGATTTTTGCTGTACCTTCCTGTTACCTGTTTGTGTGCAAAGTTGGAAAGCTGCAAGGCCACTCCACTTTaGCTCCAGTCAACTTTTACA +
Preference number: 2 (lower is better)
Translates to: GFLLYLPVTCLCAKLESCKATPL*LQSTFT
Trigger: TGTAAAAGTTGACTGGAGGCAAAGTGGAGTGGCCTT...GCAGCTTTCCAACTTTGCACACAAACAGGTAACAGGAAGGTACAGCAAAAATCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR GCA 90 bp TTAAGGGTTTACATTGCAGGGGGAAATGTACCTCGAGGTATTATTTTGTGTGAGACTGAAGAACAAGGATaGAACGCTACTCCCTTCCCC +
Preference number: 2 (lower is better)
Translates to: LRVYIAGGNVPRGIILCETEEQG*NATPFP
Trigger: GGGGAAGGGAGTAGCGTTGCATCCTTGTTCTTCAGT...CTCACACAAAATAATACCTCGAGGTACATTTCCCCCTGCAATGTAAACCCTTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR GCA 90 bp GGATTTTTGCTGTACCTTCCTGTTACCTGTTTGTGTGCAAAGTTGGAAAGCTGCCAGTGCAAACCAAAATaGCAGGGACTACATCCTTCT +
Preference number: 2 (lower is better)
Translates to: GFLLYLPVTCLCAKLESCQCKPK*QGLHPS
Trigger: AGAAGGATGTAGTCCCTGGCATTTTGGTTTGCACTG...GCAGCTTTCCAACTTTGCACACAAACAGGTAACAGGAAGGTACAGCAAAAATCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR GCA 90 bp GGGTTTATCTTAAAGATGGGGGCGAAGGGGGTGTCTGCAAAGAAGCAATTCAAACTATGGATTCTACAGTaGAAACCAAAATGCCAGGGA +
Preference number: 2 (lower is better)
Translates to: GFILKMGAKGVSAKKQFKLWILQ*KPKCQG
Trigger: TCCCTGGCATTTTGGTTTGCACTGTAGAATCCATAG...TTTGAATTGCTTCTTTGCAGACACCCCCTTCGCCCCCATCTTTAAGATAAACCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR GCA 90 bp GGATTTTTGCTGTACCTTCCTGTTACCTGTTTGTGTGCAAAGTTGGAAAGCTGCTTTGATGCCCTTTTCTaGACCTTCTGTCTAAAGGGG +
Preference number: 2 (lower is better)
Translates to: GFLLYLPVTCLCAKLESCFDALF*TFCLKG
Trigger: CCCCTTTAGACAGAAGGTGCAGAAAAGGGCATCAAA...GCAGCTTTCCAACTTTGCACACAAACAGGTAACAGGAAGGTACAGCAAAAATCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR CCA 90 bp TCTGAACCAAGAAAGGTTGAGAGCTCCAGGTATTGTGTGGAGAACATTCTGGAGCTTAATGCAGCCCAATaGAGTTGCTTTAGTAGCAGT +
Preference number: 2 (lower is better)
Translates to: SEPRKVESSRYCVENILELNAAQ*SCFSSS
Trigger: ACTGCTACTAAAGCAACTCCATTGGGCTGCATTAAG...CTCCAGAATGTTCTCCACACAATACCTGGAGCTCTCAACCTTTCTTGGTTCAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR CCA 90 bp TTAAGGGTTTACATTGCAGGGGGAAATGTACCTCGAGGTATTATTTTGTGTGAGCTTGGGATATGCTCCTaGCCCAGGGACACTAAGATT +
Preference number: 2 (lower is better)
Translates to: LRVYIAGGNVPRGIILCELGICS*PRDTKI
Trigger: AATCTTAGTGTCCCTGGGCCAGGAGCATATCCCAAG...CTCACACAAAATAATACCTCGAGGTACATTTCCCCCTGCAATGTAAACCCTTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR CCA 90 bp GGGTTTATCTTAAAGATGGGGGCGAAGGGGGTGTCTGCAAAGAAGCAATTCAAAAGAGAAAAACAGGCTTaGCGTAAGCATTTTGCTCAG +
Preference number: 2 (lower is better)
Translates to: GFILKMGAKGVSAKKQFKREKQA*RKHFAQ
Trigger: CTGAGCAAAATGCTTACGCCAAGCCTGTTTTTCTCT...TTTGAATTGCTTCTTTGCAGACACCCCCTTCGCCCCCATCTTTAAGATAAACCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 23 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR CCA 90 bp TTAAGGGTTTACATTGCAGGGGGAAATGTACCTCGAGGTATTATTTTGTGTGAGAAATACACACACCTTTaGCGCTGGCCACAAACCCAC +
Preference number: 2 (lower is better)
Translates to: LRVYIAGGNVPRGIILCEKYTHL*RWPQTH
Trigger: GTGGGTTTGTGGCCAGCGCCAAAGGTGTGTGTATTT...CTCACACAAAATAATACCTCGAGGTACATTTCCCCCTGCAATGTAAACCCTTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR CCA 90 bp TTAAGGGTTTACATTGCAGGGGGAAATGTACCTCGAGGTATTATTTTGTGTGAGTTACAGCCACCCCTCTaGGAGTTGTACACACCTTTC +
Preference number: 2 (lower is better)
Translates to: LRVYIAGGNVPRGIILCELQPPL*ELYTPF
Trigger: GAAAGGTGTGTACAACTCCCAGAGGGGTGGCTGTAA...CTCACACAAAATAATACCTCGAGGTACATTTCCCCCTGCAATGTAAACCCTTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR CAA 90 bp CCCTTCTATTTGCCCAAGACAAAGAGACTTTCCAAATCACTGCAGTaGTCACAATTACACACCTGGAGGAATCAATGCACAGTAATGGAG +
Preference number: 2 (lower is better)
Translates to: PFYLPKTKRLSKSLQ*SQLHTWRNQCTVME
Trigger: CTCCATTACTGTGCATTGATTCCTCCAGGTGTGTAATTGTGACAACTGCAGTGATTTGGAAAGTCTCTTTGTCTTGGGCAAATAGAAGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR CAA 90 bp GCTAAGTTAACTCCTATGAATGTTGTAAATGAAACACGTCCAGGGTaGGGGACTGAGGGATCAGAGATGTTACATGAGCCATCCATTTCT +
Preference number: 2 (lower is better)
Translates to: AKLTPMNVVNETRPG*GTEGSEMLHEPSIS
Trigger: AGAAATGGATGGCTCATGTAACATCTCTGATCCCTCAGTCCCCAACCCTGGACGTGTTTCATTTACAACATTCATAGGAGTTAACTTAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR TCA 90 bp GGGTTTATCTTAAAGATGGGGGCGAAGGGGGTGTCTGCAAAGAAGCAATTCAAAACAAAAGGAAACGCTTaGAGTACACACTGGTTTAAG +
Preference number: 2 (lower is better)
Translates to: GFILKMGAKGVSAKKQFKTKGNA*STHWFK
Trigger: CTTAAACCAGTGTGTACTTCAAGCGTTTCCTTTTGT...TTTGAATTGCTTCTTTGCAGACACCCCCTTCGCCCCCATCTTTAAGATAAACCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR TCA 90 bp TTAAGGGTTTACATTGCAGGGGGAAATGTACCTCGAGGTATTATTTTGTGTGAGGATACTGGATCTAATTaGCAGCAGAGGTCCTCTGTC +
Preference number: 2 (lower is better)
Translates to: LRVYIAGGNVPRGIILCEDTGSN*QQRSSV
Trigger: GACAGAGGACCTCTGCTGTCAATTAGATCCAGTATC...CTCACACAAAATAATACCTCGAGGTACATTTCCCCCTGCAATGTAAACCCTTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR TCA 90 bp GGGTTTATCTTAAAGATGGGGGCGAAGGGGGTGTCTGCAAAGAAGCAATTCAAAGTTAATGCATACACATaGAGTGTGACAAAACTTGGC +
Preference number: 2 (lower is better)
Translates to: GFILKMGAKGVSAKKQFKVNAYT*SVTKLG
Trigger: GCCAAGTTTTGTCACACTTCATGTGTATGCATTAAC...TTTGAATTGCTTCTTTGCAGACACCCCCTTCGCCCCCATCTTTAAGATAAACCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR TCA 90 bp GGATTTTTGCTGTACCTTCCTGTTACCTGTTTGTGTGCAAAGTTGGAAAGCTGCTATCTGTGTGTTTCTTaGCTGTATGGACTCCCTGTA +
Preference number: 2 (lower is better)
Translates to: GFLLYLPVTCLCAKLESCYLCVS*LYGLPV
Trigger: TACAGGGAGTCCATACAGTCAAGAAACACACAGATA...GCAGCTTTCCAACTTTGCACACAAACAGGTAACAGGAAGGTACAGCAAAAATCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR TCA 90 bp TCTGAACCAAGAAAGGTTGAGAGCTCCAGGTATTGTGTGGAGAACATTCTGGAGAATAGGGACCATTTCTaGAAATACACACACCTTTGG +
Preference number: 2 (lower is better)
Translates to: SEPRKVESSRYCVENILENRDHF*KYTHLW
Trigger: CCAAAGGTGTGTGTATTTTCAGAAATGGTCCCTATT...CTCCAGAATGTTCTCCACACAATACCTGGAGCTCTCAACCTTTCTTGGTTCAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR TCA 90 bp GGGTTTATCTTAAAGATGGGGGCGAAGGGGGTGTCTGCAAAGAAGCAATTCAAATTTTGCAGCTTACTGTaGGCAGTAAAGAGGAATTTC +
Preference number: 2 (lower is better)
Translates to: GFILKMGAKGVSAKKQFKFCSLL*AVKRNF
Trigger: GAAATTCCTCTTTACTGCTCACAGTAAGCTGCAAAA...TTTGAATTGCTTCTTTGCAGACACCCCCTTCGCCCCCATCTTTAAGATAAACCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR TCA 90 bp GGGTTTATCTTAAAGATGGGGGCGAAGGGGGTGTCTGCAAAGAAGCAATTCAAACTCGTTACAGTACTGTaGACGTCAACAAGAAGAATT +
Preference number: 2 (lower is better)
Translates to: GFILKMGAKGVSAKKQFKLVTVL*TSTRRI
Trigger: AATTCTTCTTGTTGACGTTCACAGTACTGTAACGAG...TTTGAATTGCTTCTTTGCAGACACCCCCTTCGCCCCCATCTTTAAGATAAACCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR TCA 90 bp TGTGCACGTGTCTCTGTGAGCACATTCACGGTGCATGCACCATTTTTGATGTCTAATAAAATTCCAAGGTaGACAGTGCCCAAATCAGAA +
Preference number: 2 (lower is better)
Translates to: CARVSVSTFTVHAPFLMSNKIPR*TVPKSE
Trigger: TTCTGATTTGGGCACTGTTCACCTTGGAATTTTATT...AGACATCAAAAATGGTGCATGCACCGTGAATGTGCTCACAGAGACACGTGCACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR GCA 90 bp TTAAGGGTTTACATTGCAGGGGGAAATGTACCTCGAGGTATTATTTTGTGTGAGAGGGAGGCAACTATGTaGTCAGACAGTCTGTCAATG +
Preference number: 2 (lower is better)
Translates to: LRVYIAGGNVPRGIILCEREATM*SDSLSM
Trigger: CATTGACAGACTGTCTGAGCACATAGTTGCCTCCCT...CTCACACAAAATAATACCTCGAGGTACATTTCCCCCTGCAATGTAAACCCTTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR GCA 90 bp GGATTTTTGCTGTACCTTCCTGTTACCTGTTTGTGTGCAAAGTTGGAAAGCTGCATGCTTTCAGGAGGCTaGTCACCACTTATTCTTTTC +
Preference number: 2 (lower is better)
Translates to: GFLLYLPVTCLCAKLESCMLSGG*SPLILF
Trigger: GAAAAGAATAAGTGGTGAGCAGCCTCCTGAAAGCAT...GCAGCTTTCCAACTTTGCACACAAACAGGTAACAGGAAGGTACAGCAAAAATCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR GCA 90 bp TTAAGGGTTTACATTGCAGGGGGAAATGTACCTCGAGGTATTATTTTGTGTGAGTGTCTGAATACAAGCTaGTCTTCACCTGGTGGTCAC +
Preference number: 2 (lower is better)
Translates to: LRVYIAGGNVPRGIILCECLNTS*SSPGGH
Trigger: GTGACCACCAGGTGAAGAGCAGCTTGTATTCAGACA...CTCACACAAAATAATACCTCGAGGTACATTTCCCCCTGCAATGTAAACCCTTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR GCA 90 bp TGTGCACGTGTCTCTGTGAGCACATTCACGGTGCATGCACCATTTTTGATGTCTCCGATTGCTAACTTATaGTACATTCATGTCAGAAGA +
Preference number: 2 (lower is better)
Translates to: CARVSVSTFTVHAPFLMSPIANL*YIHVRR
Trigger: TCTTCTGACATGAATGTAGCATAAGTTAGCAATCGG...AGACATCAAAAATGGTGCATGCACCGTGAATGTGCTCACAGAGACACGTGCACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR GCA 90 bp TCTGAACCAAGAAAGGTTGAGAGCTCCAGGTATTGTGTGGAGAACATTCTGGAGTGTTATCACAGGGTCTaGACTAACTCTGGAAATCTA +
Preference number: 2 (lower is better)
Translates to: SEPRKVESSRYCVENILECYHRV*TNSGNL
Trigger: TAGATTTCCAGAGTTAGTGCAGACCCTGTGATAACA...CTCCAGAATGTTCTCCACACAATACCTGGAGCTCTCAACCTTTCTTGGTTCAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR GCA 90 bp TTAAGGGTTTACATTGCAGGGGGAAATGTACCTCGAGGTATTATTTTGTGTGAGCCTAGACCAGAGCAATaGAGGCGCTATGATTCATCA +
Preference number: 2 (lower is better)
Translates to: LRVYIAGGNVPRGIILCEPRPEQ*RRYDSS
Trigger: TGATGAATCATAGCGCCTGCATTGCTCTGGTCTAGG...CTCACACAAAATAATACCTCGAGGTACATTTCCCCCTGCAATGTAAACCCTTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR CCA 90 bp GGGTTTATCTTAAAGATGGGGGCGAAGGGGGTGTCTGCAAAGAAGCAATTCAAATCATGTCAGAAGAGGTaGGAAAATTCTTACAACAGG +
Preference number: 2 (lower is better)
Translates to: GFILKMGAKGVSAKKQFKSCQKR*ENSYNR
Trigger: CCTGTTGTAAGAATTTTCCCACCTCTTCTGACATGA...TTTGAATTGCTTCTTTGCAGACACCCCCTTCGCCCCCATCTTTAAGATAAACCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR CCA 90 bp GGATTTTTGCTGTACCTTCCTGTTACCTGTTTGTGTGCAAAGTTGGAAAGCTGCTGTTTCTTGACTGTATaGACTCCCTGTACTTGCAGA +
Preference number: 2 (lower is better)
Translates to: GFLLYLPVTCLCAKLESCCFLTV*TPCTCR
Trigger: TCTGCAAGTACAGGGAGTCCATACAGTCAAGAAACA...GCAGCTTTCCAACTTTGCACACAAACAGGTAACAGGAAGGTACAGCAAAAATCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR CCA 90 bp TTAAGGGTTTACATTGCAGGGGGAAATGTACCTCGAGGTATTATTTTGTGTGAGGTTCCATTGCTGCACTaGATTAACACTGCACGGCTA +
Preference number: 2 (lower is better)
Translates to: LRVYIAGGNVPRGIILCEVPLLH*INTARL
Trigger: TAGCCGTGCAGTGTTAATCCAGTGCAGCAATGGAAC...CTCACACAAAATAATACCTCGAGGTACATTTCCCCCTGCAATGTAAACCCTTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR CCA 90 bp TCTGAACCAAGAAAGGTTGAGAGCTCCAGGTATTGTGTGGAGAACATTCTGGAGGGCAATCTAACAGATTaGAACCCTGATAAGATCATG +
Preference number: 2 (lower is better)
Translates to: SEPRKVESSRYCVENILEGNLTD*NPDKIM
Trigger: CATGATCTTATCAGGGTTCCAATCTGTTAGATTGCC...CTCCAGAATGTTCTCCACACAATACCTGGAGCTCTCAACCTTTCTTGGTTCAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR TCA 90 bp TCTGAACCAAGAAAGGTTGAGAGCTCCAGGTATTGTGTGGAGAACATTCTGGAGAATTTCCTTTATGGGTaGGTATCTTACATCTGTGGA +
Preference number: 2 (lower is better)
Translates to: SEPRKVESSRYCVENILENFLYG*VSYICG
Trigger: TCCACAGATGTAAGATACTCACCCATAAAGGAAATT...CTCCAGAATGTTCTCCACACAATACCTGGAGCTCTCAACCTTTCTTGGTTCAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR GCA 90 bp TTAAGGGTTTACATTGCAGGGGGAAATGTACCTCGAGGTATTATTTTGTGTGAGACAGATACTCAGATGTaGCTGGTGGCCATTCACTTA +
Preference number: 2 (lower is better)
Translates to: LRVYIAGGNVPRGIILCETDTQM*LVAIHL
Trigger: TAAGTGAATGGCCACCAGGCACATCTGAGTATCTGT...CTCACACAAAATAATACCTCGAGGTACATTTCCCCCTGCAATGTAAACCCTTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR GCA 90 bp TCTGAACCAAGAAAGGTTGAGAGCTCCAGGTATTGTGTGGAGAACATTCTGGAGACTAACGAAAAGGCCTaGATGAAACTTAACAGATAC +
Preference number: 2 (lower is better)
Translates to: SEPRKVESSRYCVENILETNEKA*MKLNRY
Trigger: GTATCTGTTAAGTTTCATGCAGGCCTTTTCGTTAGT...CTCCAGAATGTTCTCCACACAATACCTGGAGCTCTCAACCTTTCTTGGTTCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR GCA 90 bp TCCCTAATGACTAAAGCTGACCGTCTGTTTGTTTGTATCCAACGGATAGCTTCTCACTCACTTGAGTCATaGCTGTCAATCTCTTTTGAG +
Preference number: 2 (lower is better)
Translates to: SLMTKADRLFVCIQRIASHSLES*LSISFE
Trigger: CTCAAAAGAGATTGACAGGCATGACTCAAGTGAGTG...AGAAGCTATCCGTTGGATACAAACAAACAGACGGTCAGCTTTAGTCATTAGGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR GCA 90 bp TGTGCACGTGTCTCTGTGAGCACATTCACGGTGCATGCACCATTTTTGATGTCTTTTGGAACCTTAACTTaGAACACTGCTAAGTTAACT +
Preference number: 2 (lower is better)
Translates to: CARVSVSTFTVHAPFLMSFGTLT*NTAKLT
Trigger: AGTTAACTTAGCAGTGTTGCAAGTTAAGGTTCCAAA...AGACATCAAAAATGGTGCATGCACCGTGAATGTGCTCACAGAGACACGTGCACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR GCA 90 bp GGATTTTTGCTGTACCTTCCTGTTACCTGTTTGTGTGCAAAGTTGGAAAGCTGCTGTTATCACAGGGTCTaGACTAACTCTGGAAATCTA +
Preference number: 2 (lower is better)
Translates to: GFLLYLPVTCLCAKLESCCYHRV*TNSGNL
Trigger: TAGATTTCCAGAGTTAGTGCAGACCCTGTGATAACA...GCAGCTTTCCAACTTTGCACACAAACAGGTAACAGGAAGGTACAGCAAAAATCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR GCA 90 bp TCCCTAATGACTAAAGCTGACCGTCTGTTTGTTTGTATCCAACGGATAGCTTCTTTCCTTTCACAGCTCTaGTACAACAGCATCATAAGC +
Preference number: 2 (lower is better)
Translates to: SLMTKADRLFVCIQRIASFLSQL*YNSIIS
Trigger: GCTTATGATGCTGTTGTAGCAGAGCTGTGAAAGGAA...AGAAGCTATCCGTTGGATACAAACAAACAGACGGTCAGCTTTAGTCATTAGGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR GCA 90 bp TGTGCACGTGTCTCTGTGAGCACATTCACGGTGCATGCACCATTTTTGATGTCTAATGCCTTGTTTACATaGATGAATGTGTCACAAGTA +
Preference number: 2 (lower is better)
Translates to: CARVSVSTFTVHAPFLMSNALFT*MNVSQV
Trigger: TACTTGTGACACATTCATGCATGTAAACAAGGCATT...AGACATCAAAAATGGTGCATGCACCGTGAATGTGCTCACAGAGACACGTGCACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR GCA 90 bp GGATTTTTGCTGTACCTTCCTGTTACCTGTTTGTGTGCAAAGTTGGAAAGCTGCGCAGAAGCTGGAAAATaGCTTGTTTACATGCATGAA +
Preference number: 2 (lower is better)
Translates to: GFLLYLPVTCLCAKLESCAEAGK*LVYMHE
Trigger: TTCATGCATGTAAACAAGGCATTTTCCAGCTTCTGC...GCAGCTTTCCAACTTTGCACACAAACAGGTAACAGGAAGGTACAGCAAAAATCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR CCA 90 bp TTAAGGGTTTACATTGCAGGGGGAAATGTACCTCGAGGTATTATTTTGTGTGAGTGGGCAGGTATTTGCTaGTACAAAATGTCGGCACTT +
Preference number: 2 (lower is better)
Translates to: LRVYIAGGNVPRGIILCEWAGIC*YKMSAL
Trigger: AAGTGCCGACATTTTGTACCAGCAAATACCTGCCCA...CTCACACAAAATAATACCTCGAGGTACATTTCCCCCTGCAATGTAAACCCTTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR CCA 90 bp TTAAGGGTTTACATTGCAGGGGGAAATGTACCTCGAGGTATTATTTTGTGTGAGGCACACGGCAGAAGCTaGAAAATGCCTTGTTTACAT +
Preference number: 2 (lower is better)
Translates to: LRVYIAGGNVPRGIILCEAHGRS*KMPCLH
Trigger: ATGTAAACAAGGCATTTTCCAGCTTCTGCCGTGTGC...CTCACACAAAATAATACCTCGAGGTACATTTCCCCCTGCAATGTAAACCCTTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR CCA 90 bp TTAAGGGTTTACATTGCAGGGGGAAATGTACCTCGAGGTATTATTTTGTGTGAGTTTTCCAGAGAACACTaGAGCCTGTGGAGTTCCATT +
Preference number: 2 (lower is better)
Translates to: LRVYIAGGNVPRGIILCEFSREH*SLWSSI
Trigger: AATGGAACTCCACAGGCTCCAGTGTTCTCTGGAAAA...CTCACACAAAATAATACCTCGAGGTACATTTCCCCCTGCAATGTAAACCCTTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR CCA 90 bp AGAATTTACTCACTACTTCACAAATTATTTACGTTTGGAATTCTGACGACTGGCCAATCCAAGCTTTGGTaGAAAAGACCCGGCACCTCC +
Preference number: 2 (lower is better)
Translates to: RIYSLLHKLFTFGILTTGQSKLW*KRPGTS
Trigger: GGAGGTGCCGGGTCTTTTCCACCAAAGCTTGGATTG...GCCAGTCGTCAGAATTCCAAACGTAAATAATTTGTGAAGTAGTGAGTAAATTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446273.1
3UTR CAA 90 bp CAGCTCTGCTACAACAGCATCATAAGCCACCTTGACAACTTTCTTTaGCAGCTTACTGTGAGCAGTAAAGAGGAATTTCCCTTTTTGAAA +
Preference number: 2 (lower is better)
Translates to: QLCYNSIISHLDNFL*QLTVSSKEEFPFLK
Trigger: TTTCAAAAAGGGAAATTCCTCTTTACTGCTCACAGTAAGCTGCAAAAGAAAGTTGTCAAGGTGGCTTATGATGCTGTTGTAGCAGAGCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR CAA 90 bp TTACAGGTTTTGTTTCTGCTGACAGTGTTTCAGATGAGAGGATTTTaGCTGTACCTTCCTGTTACCTGTTTGTGTGCAAAGTTGGAAAGC +
Preference number: 2 (lower is better)
Translates to: LQVLFLLTVFQMRGF*LYLPVTCLCAKLES
Trigger: GCTTTCCAACTTTGCACACAAACAGGTAACAGGAAGGTACAGCAAAAATCCTCTCATCTGAAACACTGTCAGCAGAAACAAAACCTGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR TCA 90 bp TCCCTAATGACTAAAGCTGACCGTCTGTTTGTTTGTATCCAACGGATAGCTTCTCTAGGTTGGCGTTCATaGTTCAAGTATTTCAAGAGT +
Preference number: 2 (lower is better)
Translates to: SLMTKADRLFVCIQRIASLGWRS*FKYFKS
Trigger: ACTCTTGAAATACTTGAATCATGAACGCCAACCTAG...AGAAGCTATCCGTTGGATACAAACAAACAGACGGTCAGCTTTAGTCATTAGGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR TCA 90 bp TCCCTAATGACTAAAGCTGACCGTCTGTTTGTTTGTATCCAACGGATAGCTTCTACAAAAGGAAACGCTTaGAGTACACACTGGTTTAAG +
Preference number: 2 (lower is better)
Translates to: SLMTKADRLFVCIQRIASTKGNA*STHWFK
Trigger: CTTAAACCAGTGTGTACTTCAAGCGTTTCCTTTTGT...AGAAGCTATCCGTTGGATACAAACAAACAGACGGTCAGCTTTAGTCATTAGGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR TCA 90 bp GGATTTTTGCTGTACCTTCCTGTTACCTGTTTGTGTGCAAAGTTGGAAAGCTGCAATTTCCTTTATGGGTaGGTATCTTACATCTGTGGA +
Preference number: 2 (lower is better)
Translates to: GFLLYLPVTCLCAKLESCNFLYG*VSYICG
Trigger: TCCACAGATGTAAGATACTCACCCATAAAGGAAATT...GCAGCTTTCCAACTTTGCACACAAACAGGTAACAGGAAGGTACAGCAAAAATCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR TCA 90 bp TTAAGGGTTTACATTGCAGGGGGAAATGTACCTCGAGGTATTATTTTGTGTGAGTATGAATGTTGTAAATaGAACACGTCCAGGGTTGGG +
Preference number: 2 (lower is better)
Translates to: LRVYIAGGNVPRGIILCEYECCK*NTSRVG
Trigger: CCCAACCCTGGACGTGTTTCATTTACAACATTCATA...CTCACACAAAATAATACCTCGAGGTACATTTCCCCCTGCAATGTAAACCCTTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR TCA 90 bp GGATTTTTGCTGTACCTTCCTGTTACCTGTTTGTGTGCAAAGTTGGAAAGCTGCATGAGGTCTGAAGACTaGCAATTCATTGTATACACA +
Preference number: 2 (lower is better)
Translates to: GFLLYLPVTCLCAKLESCMRSED*QFIVYT
Trigger: TGTGTATACAATGAATTGTCAGTCTTCAGACCTCAT...GCAGCTTTCCAACTTTGCACACAAACAGGTAACAGGAAGGTACAGCAAAAATCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR TCA 90 bp TCCCTAATGACTAAAGCTGACCGTCTGTTTGTTTGTATCCAACGGATAGCTTCTTTTTGCAGCTTACTGTaGGCAGTAAAGAGGAATTTC +
Preference number: 2 (lower is better)
Translates to: SLMTKADRLFVCIQRIASFCSLL*AVKRNF
Trigger: GAAATTCCTCTTTACTGCTCACAGTAAGCTGCAAAA...AGAAGCTATCCGTTGGATACAAACAAACAGACGGTCAGCTTTAGTCATTAGGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR GCA 90 bp GGATTTTTGCTGTACCTTCCTGTTACCTGTTTGTGTGCAAAGTTGGAAAGCTGCACTAACGAAAAGGCCTaGATGAAACTTAACAGATAC +
Preference number: 2 (lower is better)
Translates to: GFLLYLPVTCLCAKLESCTNEKA*MKLNRY
Trigger: GTATCTGTTAAGTTTCATGCAGGCCTTTTCGTTAGT...GCAGCTTTCCAACTTTGCACACAAACAGGTAACAGGAAGGTACAGCAAAAATCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR GCA 90 bp TTAAGGGTTTACATTGCAGGGGGAAATGTACCTCGAGGTATTATTTTGTGTGAGATGCTTTCAGGAGGCTaGTCACCACTTATTCTTTTC +
Preference number: 2 (lower is better)
Translates to: LRVYIAGGNVPRGIILCEMLSGG*SPLILF
Trigger: GAAAAGAATAAGTGGTGAGCAGCCTCCTGAAAGCAT...CTCACACAAAATAATACCTCGAGGTACATTTCCCCCTGCAATGTAAACCCTTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR GCA 90 bp TCTGAACCAAGAAAGGTTGAGAGCTCCAGGTATTGTGTGGAGAACATTCTGGAGCTCAACTCTACACTGTaGAATATTGATGCTAATGAA +
Preference number: 2 (lower is better)
Translates to: SEPRKVESSRYCVENILELNSTL*NIDANE
Trigger: TTCATTAGCATCAATATTGCACAGTGTAGAGTTGAG...CTCCAGAATGTTCTCCACACAATACCTGGAGCTCTCAACCTTTCTTGGTTCAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR CAA 90 bp TACCTTCTATACCATATTCAACCCACAGGAGTTTGGAAGAACCGATaGCTAACTTATGCTACATTCATGTCAGAAGAGGTGGGAAAATTC +
Preference number: 2 (lower is better)
Translates to: YLLYHIQPTGVWKNR*LTYATFMSEEVGKF
Trigger: GAATTTTCCCACCTCTTCTGACATGAATGTAGCATAAGTTAGCAATCGGTTCTTCCAAACTCCTGTGGGTTGAATATGGTATAGAAGGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR TCA 90 bp TTAAGGGTTTACATTGCAGGGGGAAATGTACCTCGAGGTATTATTTTGTGTGAGACAAAAGGAAACGCTTaGAGTACACACTGGTTTAAG +
Preference number: 2 (lower is better)
Translates to: LRVYIAGGNVPRGIILCETKGNA*STHWFK
Trigger: CTTAAACCAGTGTGTACTTCAAGCGTTTCCTTTTGT...CTCACACAAAATAATACCTCGAGGTACATTTCCCCCTGCAATGTAAACCCTTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR TCA 90 bp TTAAGGGTTTACATTGCAGGGGGAAATGTACCTCGAGGTATTATTTTGTGTGAGCTCGTTACAGTACTGTaGACGTCAACAAGAAGAATT +
Preference number: 2 (lower is better)
Translates to: LRVYIAGGNVPRGIILCELVTVL*TSTRRI
Trigger: AATTCTTCTTGTTGACGTTCACAGTACTGTAACGAG...CTCACACAAAATAATACCTCGAGGTACATTTCCCCCTGCAATGTAAACCCTTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR GCA 90 bp TCCCTAATGACTAAAGCTGACCGTCTGTTTGTTTGTATCCAACGGATAGCTTCTGACTTTCCAAATCACTaGAGTTGTCACAATTACACA +
Preference number: 2 (lower is better)
Translates to: SLMTKADRLFVCIQRIASDFPNH*SCHNYT
Trigger: TGTGTAATTGTGACAACTGCAGTGATTTGGAAAGTC...AGAAGCTATCCGTTGGATACAAACAAACAGACGGTCAGCTTTAGTCATTAGGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR GCA 90 bp GGATTTTTGCTGTACCTTCCTGTTACCTGTTTGTGTGCAAAGTTGGAAAGCTGCTTTGGAACCTTAACTTaGAACACTGCTAAGTTAACT +
Preference number: 2 (lower is better)
Translates to: GFLLYLPVTCLCAKLESCFGTLT*NTAKLT
Trigger: AGTTAACTTAGCAGTGTTGCAAGTTAAGGTTCCAAA...GCAGCTTTCCAACTTTGCACACAAACAGGTAACAGGAAGGTACAGCAAAAATCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR CCA 90 bp TCCCTAATGACTAAAGCTGACCGTCTGTTTGTTTGTATCCAACGGATAGCTTCTCTCCAATTTCCTTTATaGGTGAGTATCTTACATCTG +
Preference number: 2 (lower is better)
Translates to: SLMTKADRLFVCIQRIASLQFPL*VSILHL
Trigger: CAGATGTAAGATACTCACCCATAAAGGAAATTGGAG...AGAAGCTATCCGTTGGATACAAACAAACAGACGGTCAGCTTTAGTCATTAGGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR CCA 90 bp TTAAGGGTTTACATTGCAGGGGGAAATGTACCTCGAGGTATTATTTTGTGTGAGTCACAATTACACACCTaGAGGAATCAATGCACAGTA +
Preference number: 2 (lower is better)
Translates to: LRVYIAGGNVPRGIILCESQLHT*RNQCTV
Trigger: TACTGTGCATTGATTCCTCCAGGTGTGTAATTGTGA...CTCACACAAAATAATACCTCGAGGTACATTTCCCCCTGCAATGTAAACCCTTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR CAA 90 bp TTTTCCTCTTGCATACCTTCTATACCATATTCAACCCACAGGAGTTaGGAAGAACCGATTGCTAACTTATGCTACATTCATGTCAGAAGA +
Preference number: 2 (lower is better)
Translates to: FSSCIPSIPYSTHRS*EEPIANLCYIHVRR
Trigger: TCTTCTGACATGAATGTAGCATAAGTTAGCAATCGGTTCTTCCAAACTCCTGTGGGTTGAATATGGTATAGAAGGTATGCAAGAGGAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR TCA 90 bp TTAAGGGTTTACATTGCAGGGGGAAATGTACCTCGAGGTATTATTTTGTGTGAGTGGAAAGGAACAAAGTaGTGGCATTCTCATCTATAT +
Preference number: 2 (lower is better)
Translates to: LRVYIAGGNVPRGIILCEWKGTK*WHSHLY
Trigger: ATATAGATGAGAATGCCATCACTTTGTTCCTTTCCA...CTCACACAAAATAATACCTCGAGGTACATTTCCCCCTGCAATGTAAACCCTTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR CCA 90 bp TCCCTAATGACTAAAGCTGACCGTCTGTTTGTTTGTATCCAACGGATAGCTTCTGGTCAAAATGGAATCTaGCTGTTAACCTTACAAAAA +
Preference number: 2 (lower is better)
Translates to: SLMTKADRLFVCIQRIASGQNGI*LLTLQK
Trigger: TTTTTGTAAGGTTAACAGCCAGATTCCATTTTGACC...AGAAGCTATCCGTTGGATACAAACAAACAGACGGTCAGCTTTAGTCATTAGGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR CAA 90 bp CTCAAACCTGATCATAAGGAAAGAGGGAACAAAGTTTCTCTGTTTTaGAGACATCGCATCATCAAAAGTTATCTTCCGTTCCCATTTCAA +
Preference number: 2 (lower is better)
Translates to: LKPDHKERGNKVSLF*RHRIIKSYLPFPFQ
Trigger: TTGAAATGGGAACGGAAGATAACTTTTGATGATGCGATGTCTCAAAAACAGAGAAACTTTGTTCCCTCTTTCCTTATGATCAGGTTTGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR CAA 90 bp GGAGGTATGGTGAGCAGGTTAGGGAGGGTCGATGTTGAATTTTTATaGTTATTACTATGTTCACAGATTCTTGGAGCTGATAATTATTTC +
Preference number: 2 (lower is better)
Translates to: GGMVSRLGRVDVEFL*LLLCSQILGADNYF
Trigger: GAAATAATTATCAGCTCCAAGAATCTGTGAACATAGTAATAACAATAAAAATTCAACATCGACCCTCCCTAACCTGCTCACCATACCTCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR GCA 90 bp TTAAGGGTTTACATTGCAGGGGGAAATGTACCTCGAGGTATTATTTTGTGTGAGCTCAACTCTACACTGTaGAATATTGATGCTAATGAA +
Preference number: 2 (lower is better)
Translates to: LRVYIAGGNVPRGIILCELNSTL*NIDANE
Trigger: TTCATTAGCATCAATATTGCACAGTGTAGAGTTGAG...CTCACACAAAATAATACCTCGAGGTACATTTCCCCCTGCAATGTAAACCCTTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR GCA 90 bp TTAAGGGTTTACATTGCAGGGGGAAATGTACCTCGAGGTATTATTTTGTGTGAGAATGCCTTGTTTACATaGATGAATGTGTCACAAGTA +
Preference number: 2 (lower is better)
Translates to: LRVYIAGGNVPRGIILCENALFT*MNVSQV
Trigger: TACTTGTGACACATTCATGCATGTAAACAAGGCATT...CTCACACAAAATAATACCTCGAGGTACATTTCCCCCTGCAATGTAAACCCTTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR CAA 90 bp ACACAGACACAAGCTAAAAAGTCAAATACATTAGGCATTGTTGTATaGTATCCTTCACTGAAGACGCTAAAGAAAGAAAAACTCCCTTGT +
Preference number: 2 (lower is better)
Translates to: TQTQAKKSNTLGIVV*YPSLKTLKKEKLPC
Trigger: ACAAGGGAGTTTTTCTTTCTTTAGCGTCTTCAGTGAAGGATACAATACAACAATGCCTAATGTATTTGACTTTTTAGCTTGTGTCTGTGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR CAA 90 bp GATCTGGTCCCGGTGGCCACACGCATGCGGGCAGTGTGGGTGCTGAGCTGCTGGTGGCTCGCAGGAGCCTaGGGATATGCTCCTGGCCCA +
Preference number: 3 (lower is better)
Translates to: DLVPVATRMRAVWVLSCWWLAGA*GYAPGP
Trigger: TGGGCCAGGAGCATATCCCAAGGCTCCTGCGAGCCA...CCAGCAGCTCAGCACCCACACTGCCCGCATGCGTGTGGCCACCGGGACCAGATC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR TCA 72 bp TCCCGGTGGCCACACGCATGCGGGCAGTGTGGGTGCTaGGCTGCTGGAGGAGTAGCTCTCCACTCCCTGACC +
Preference number: 3 (lower is better)
Translates to: SRWPHACGQCGC*AAGGVALHSLT
Trigger: GGTCAGGGAGTGGAGAGCTACTCCTCCAGCAGCTCAGCACCCACACTGCCCGCATGCGTGTGGCCACCGGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR CCA 72 bp GTGGGGCAGGACACAGCAGTGAACCAAGAGCGGCAGTaGACAGGGTCGCCACTGGCTCGCAGGAGCCTTGGG +
Preference number: 3 (lower is better)
Translates to: VGQDTAVNQERQ*TGSPLARRSLG
Trigger: CCCAAGGCTCCTGCGAGCCAGTGGCGACCCTGTCCACTGCCGCTCTTGGTTCACTGCTGTGTCCTGCCCCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR CAA 90 bp GATCTGGTCCCGGTGGCCACACGCATGCGGGCAGTGTGGGTGCTGAGCTGCTGGTTCAGCCCACTGCCTTaGGGGCCTGTCCAGAACCAC +
Preference number: 3 (lower is better)
Translates to: DLVPVATRMRAVWVLSCWFSPLP*GPVQNH
Trigger: GTGGTTCTGGACAGGCCCCAAAGGCAGTGGGCTGAA...CCAGCAGCTCAGCACCCACACTGCCCGCATGCGTGTGGCCACCGGGACCAGATC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR CCA 72 bp GCCACACGCATGCGGGCAGTGTGGGTGCTGAGCTGCTaGAGGAGTAGCTCTCCACTCCCTGACCTGTGTCCC +
Preference number: 3 (lower is better)
Translates to: ATRMRAVWVLSC*RSSSPLPDLCP
Trigger: GGGACACAGGTCAGGGAGTGGAGAGCTACTCCTCCAGCAGCTCAGCACCCACACTGCCCGCATGCGTGTGGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR CCA 72 bp GATCTGGTCCCGGTGGCCACACGCATGCGGGCAGTGTaGGTGCTGAGCTGCTGGAGGAGTAGCTCTCCACTC +
Preference number: 3 (lower is better)
Translates to: DLVPVATRMRAV*VLSCWRSSSPL
Trigger: GAGTGGAGAGCTACTCCTCCAGCAGCTCAGCACCCACACTGCCCGCATGCGTGTGGCCACCGGGACCAGATC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR CAA 90 bp GTATGCCACAATCACTCGGGATCTGGTCCCGGTGGCCACACGCATGCGGGCAGTCCGCACGACAGCACTTaGCTCCACACAGAGAGCGGT +
Preference number: 3 (lower is better)
Translates to: VCHNHSGSGPGGHTHAGSPHDST*LHTESG
Trigger: ACCGCTCTCTGTGTGGAGCAAAGTGCTGTCGTGCGG...ACTGCCCGCATGCGTGTGGCCACCGGGACCAGATCCCGAGTGATTGTGGCATAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR CAA 90 bp ATGCGGGCAGTGTGGGTGCTGAGCTGCTGGAGGAGTAGCTCTCCACTCCCTGACCCGCACGACAGCACTTaGCTCCACACAGAGAGCGGT +
Preference number: 3 (lower is better)
Translates to: MRAVWVLSCWRSSSPLPDPHDST*LHTESG
Trigger: ACCGCTCTCTGTGTGGAGCAAAGTGCTGTCGTGCGG...GTCAGGGAGTGGAGAGCTACTCCTCCAGCAGCTCAGCACCCACACTGCCCGCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR CCA 72 bp ACCTGCGCTCTTGGACTAACGTGGGTCTGCGTCGCCTaGGTACCTTCCCCTGTCTCCTCTCCCAAGTCCCAG +
Preference number: 3 (lower is better)
Translates to: TCALGLTWVCVA*VPSPVSSPKSQ
Trigger: CTGGGACTTGGGAGAGGAGACAGGGGAAGGTACCCAGGCGACGCAGACCCACGTTAGTCCAAGAGCGCAGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR TCA 72 bp CCAGCGGGGCCACGTCAATGCTGCAGATGCCAAGTGTaGCCACCTACCCACAGAGGGCTCATGCAGGCTTGT +
Preference number: 3 (lower is better)
Translates to: PAGPRQCCRCQV*PPTHRGLMQAC
Trigger: ACAAGCCTGCATGAGCCCTCTGTGGGTAGGTGGTCACACTTGGCATCTGCAGCATTGACGTGGCCCCGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR CAA 90 bp ATGCGGGCAGTGTGGGTGCTGAGCTGCTGGAGGAGTAGCTCTCCACTCCCTGACTGCTCCCACCAAGGGTaGGAATGGGCAGGTATTTGC +
Preference number: 3 (lower is better)
Translates to: MRAVWVLSCWRSSSPLPDCSHQG*EWAGIC
Trigger: GCAAATACCTGCCCATTCCAACCCTTGGTGGGAGCA...GTCAGGGAGTGGAGAGCTACTCCTCCAGCAGCTCAGCACCCACACTGCCCGCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR CAA 90 bp GATCTGGTCCCGGTGGCCACACGCATGCGGGCAGTGTGGGTGCTGAGCTGCTGGTCAACCCACAGGAGTTaGGAAGAACCGATTGCTAAC +
Preference number: 3 (lower is better)
Translates to: DLVPVATRMRAVWVLSCWSTHRS*EEPIAN
Trigger: GTTAGCAATCGGTTCTTCCAAACTCCTGTGGGTTGA...CCAGCAGCTCAGCACCCACACTGCCCGCATGCGTGTGGCCACCGGGACCAGATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR CAA 90 bp CAAAGGGTAAAAGCGTGCTGCCCGCTCTGCACACGGCAGAAGCTGGAAAATGCCTTCAGCCCACTGCCTTaGGGGCCTGTCCAGAACCAC +
Preference number: 3 (lower is better)
Translates to: QRVKACCPLCTRQKLENAFSPLP*GPVQNH
Trigger: GTGGTTCTGGACAGGCCCCAAAGGCAGTGGGCTGAA...GGCATTTTCCAGCTTCTGCCGTGTGCAGAGCGGGCAGCACGCTTTTACCCTTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR CAA 90 bp GATCTGGTCCCGGTGGCCACACGCATGCGGGCAGTGTGGGTGCTGAGCTGCTGGAGTGCTTCTTTTCTTTaGGCTACTCGTGTGGTAGGT +
Preference number: 3 (lower is better)
Translates to: DLVPVATRMRAVWVLSCWSASFL*ATRVVG
Trigger: ACCTACCACACGAGTAGCCAAAAGAAAAGAAGCACT...CCAGCAGCTCAGCACCCACACTGCCCGCATGCGTGTGGCCACCGGGACCAGATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR CAA 90 bp AACTGCAGGCCCCCTGGAATTTACCTGGCCATCAGACCTGCCAGCAACAGTGGCTGCTCCCACCAAGGGTaGGAATGGGCAGGTATTTGC +
Preference number: 3 (lower is better)
Translates to: NCRPPGIYLAIRPASNSGCSHQG*EWAGIC
Trigger: GCAAATACCTGCCCATTCCAACCCTTGGTGGGAGCA...GCCACTGTTGCTGGCAGGTCTGATGGCCAGGTAAATTCCAGGGGGCCTGCAGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR CAA 90 bp AATGAAGCTGAAGGAATCGAGTGGGAGGGACTGTTCTCCTCTTTGGGGGAGCTCTGGCTCGCAGGAGCCTaGGGATATGCTCCTGGCCCA +
Preference number: 3 (lower is better)
Translates to: NEAEGIEWEGLFSSLGELWLAGA*GYAPGP
Trigger: TGGGCCAGGAGCATATCCCAAGGCTCCTGCGAGCCA...GAGCTCCCCCAAAGAGGAGAACAGTCCCTCCCACTCGATTCCTTCAGCTTCATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR CAA 90 bp AACTGCAGGCCCCCTGGAATTTACCTGGCCATCAGACCTGCCAGCAACAGTGGCGCGGTTTTAGAGAAATaGCAGGCAGCAACCCCACCC +
Preference number: 3 (lower is better)
Translates to: NCRPPGIYLAIRPASNSGAVLEK*QAATPP
Trigger: GGGTGGGGTTGCTGCCTGCAATTTCTCTAAAACCGC...GCCACTGTTGCTGGCAGGTCTGATGGCCAGGTAAATTCCAGGGGGCCTGCAGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR GCA 72 bp GGCCGCCTCAGGACACAGACTCAAAGGGTAAAAGCGTaGTGCCCGCTCTGCACACGGCAGAAGCTGGAAAAT +
Preference number: 3 (lower is better)
Translates to: GRLRTQTQRVKA*CPLCTRQKLEN
Trigger: ATTTTCCAGCTTCTGCCGTGTGCAGAGCGGGCAGCACGCTTTTACCCTTTGAGTCTGTGTCCTGAGGCGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR GCA 72 bp CTGCAGGCCCCCTGGAATTTACCTGGCCATCAGACCTaGCAGCAACAGTGGCAAGAGGACTCAGAGGTCTCT +
Preference number: 3 (lower is better)
Translates to: LQAPWNLPGHQT*QQQWQEDSEVS
Trigger: AGAGACCTCTGAGTCCTCTTGCCACTGTTGCTGGCAGGTCTGATGGCCAGGTAAATTCCAGGGGGCCTGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR CCA 72 bp TCAAATATTAGGGGTATGCCACAATCACTCGGGATCTaGTCCCGGTGGCCACACGCATGCGGGCAGTGTGGG +
Preference number: 3 (lower is better)
Translates to: SNIRGMPQSLGI*SRWPHACGQCG
Trigger: CCCACACTGCCCGCATGCGTGTGGCCACCGGGACCAGATCCCGAGTGATTGTGGCATACCCCTAATATTTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR CAA 90 bp ATGCGGGCAGTGTGGGTGCTGAGCTGCTGGAGGAGTAGCTCTCCACTCCCTGACGAAATAAACACACCGTaGCTCCAAGAGGTACCTCCT +
Preference number: 3 (lower is better)
Translates to: MRAVWVLSCWRSSSPLPDEINTP*LQEVPP
Trigger: AGGAGGTACCTCTTGGAGCAACGGTGTGTTTATTTC...GTCAGGGAGTGGAGAGCTACTCCTCCAGCAGCTCAGCACCCACACTGCCCGCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR CAA 90 bp CAAAGGGTAAAAGCGTGCTGCCCGCTCTGCACACGGCAGAAGCTGGAAAATGCCCTGGAAGCAGAGCTTTaGCATGGGGAACAGTGGTGG +
Preference number: 3 (lower is better)
Translates to: QRVKACCPLCTRQKLENALEAEL*HGEQWW
Trigger: CCACCACTGTTCCCCATGCAAAAGCTCTGCTTCCAG...GGCATTTTCCAGCTTCTGCCGTGTGCAGAGCGGGCAGCACGCTTTTACCCTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR CAA 90 bp CAAAGGGTAAAAGCGTGCTGCCCGCTCTGCACACGGCAGAAGCTGGAAAATGCCCCACCCCTCTGGGAGTaGTACACACCTTTCAGTAGC +
Preference number: 3 (lower is better)
Translates to: QRVKACCPLCTRQKLENAPPLWE*YTPFSS
Trigger: GCTACTGAAAGGTGTGTACAACTCCCAGAGGGGTGG...GGCATTTTCCAGCTTCTGCCGTGTGCAGAGCGGGCAGCACGCTTTTACCCTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR CAA 90 bp AATGAAGCTGAAGGAATCGAGTGGGAGGGACTGTTCTCCTCTTTGGGGGAGCTCACATGTGCGTCCCCCTaGCTCAGGATGTCTGGGTGT +
Preference number: 3 (lower is better)
Translates to: NEAEGIEWEGLFSSLGELTCASP*LRMSGC
Trigger: ACACCCAGACATCCTGAGCAAGGGGGACGCACATGT...GAGCTCCCCCAAAGAGGAGAACAGTCCCTCCCACTCGATTCCTTCAGCTTCATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR CAA 90 bp AACTTTTACAGCCACCCCTCTGGGAGTTGTACACACCTTTCAGTAGCCGAAGGGTTCAGCCCACTGCCTTaGGGGCCTGTCCAGAACCAC +
Preference number: 3 (lower is better)
Translates to: NFYSHPSGSCTHLSVAEGFSPLP*GPVQNH
Trigger: GTGGTTCTGGACAGGCCCCAAAGGCAGTGGGCTGAA...CCCTTCGGCTACTGAAAGGTGTGTACAACTCCCAGAGGGGTGGCTGTAAAAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR CAA 90 bp GTATGCCACAATCACTCGGGATCTGGTCCCGGTGGCCACACGCATGCGGGCAGTGACACAGGAAGGAACTaGGCATTCTACATTACTGAG +
Preference number: 3 (lower is better)
Translates to: VCHNHSGSGPGGHTHAGSDTGRN*AFYITE
Trigger: CTCAGTAATGTAGAATGCCAAGTTCCTTCCTGTGTC...ACTGCCCGCATGCGTGTGGCCACCGGGACCAGATCCCGAGTGATTGTGGCATAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR CAA 90 bp ATGCGGGCAGTGTGGGTGCTGAGCTGCTGGAGGAGTAGCTCTCCACTCCCTGACAGTGCTTCTTTTCTTTaGGCTACTCGTGTGGTAGGT +
Preference number: 3 (lower is better)
Translates to: MRAVWVLSCWRSSSPLPDSASFL*ATRVVG
Trigger: ACCTACCACACGAGTAGCCAAAAGAAAAGAAGCACT...GTCAGGGAGTGGAGAGCTACTCCTCCAGCAGCTCAGCACCCACACTGCCCGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR CAA 90 bp GTATGCCACAATCACTCGGGATCTGGTCCCGGTGGCCACACGCATGCGGGCAGTGTATCTGTGTGTTTCTaGACTGTATGGACTCCCTGT +
Preference number: 3 (lower is better)
Translates to: VCHNHSGSGPGGHTHAGSVSVCF*TVWTPC
Trigger: ACAGGGAGTCCATACAGTCAAGAAACACACAGATAC...ACTGCCCGCATGCGTGTGGCCACCGGGACCAGATCCCGAGTGATTGTGGCATAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR GCA 72 bp TGGGAGGCAATGGAGATAACACCCCTCCAACACAAATaGAAACCGGCTCCCCCGACCTCCTCTGCTCTTTCT +
Preference number: 3 (lower is better)
Translates to: WEAMEITPLQHK*KPAPPTSSALS
Trigger: AGAAAGAGCAGAGGAGGTCGGGGGAGCCGGTTTGCATTTGTGTTGGAGGGGTGTTATCTCCATTGCCTCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR GCA 72 bp ACCGCGCCCAGCCAAGACAGGGTTTACATACTGGTCTaGTGTCACTGTGTGGGAGGCAATGGAGATAACACC +
Preference number: 3 (lower is better)
Translates to: TAPSQDRVYILV*CHCVGGNGDNT
Trigger: GGTGTTATCTCCATTGCCTCCCACACAGTGACAGCAGACCAGTATGTAAACCCTGTCTTGGCTGGGCGCGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR GCA 72 bp AGACCCGGCACCTCCACACTCTCCACACTCGAGACTTaGAGATGCACGTGTGACGGTGCCATTCTTCGTATA +
Preference number: 3 (lower is better)
Translates to: RPGTSTLSTLET*RCTCDGAILRI
Trigger: TATACGAAGAATGGCACCGTCACACGTGCATCTGCAAGTCTCGAGTGTGGAGAGTGTGGAGGTGCCGGGTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446273.1
3UTR-3UTR CAA 90 bp CAAAGGGTAAAAGCGTGCTGCCCGCTCTGCACACGGCAGAAGCTGGAAAATGCCGGAATGGGCAGGTATTaGCTGGTACAAAATGTCGGC +
Preference number: 3 (lower is better)
Translates to: QRVKACCPLCTRQKLENAGMGRY*LVQNVG
Trigger: GCCGACATTTTGTACCAGCAAATACCTGCCCATTCC...GGCATTTTCCAGCTTCTGCCGTGTGCAGAGCGGGCAGCACGCTTTTACCCTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR CAA 90 bp ATGCGGGCAGTGTGGGTGCTGAGCTGCTGGAGGAGTAGCTCTCCACTCCCTGACGAAAGAAAAACTCCCTaGTCCTCAATAGCAGCAAGT +
Preference number: 3 (lower is better)
Translates to: MRAVWVLSCWRSSSPLPDERKTP*SSIAAS
Trigger: ACTTGCTGCTATTGAGGACAAGGGAGTTTTTCTTTC...GTCAGGGAGTGGAGAGCTACTCCTCCAGCAGCTCAGCACCCACACTGCCCGCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR CAA 90 bp TGTGCACGTGTCTCTGTGAGCACATTCACGGTGCATGCACCATTTTTGATGTCTTGGCTCGCAGGAGCCTaGGGATATGCTCCTGGCCCA +
Preference number: 3 (lower is better)
Translates to: CARVSVSTFTVHAPFLMSWLAGA*GYAPGP
Trigger: TGGGCCAGGAGCATATCCCAAGGCTCCTGCGAGCCA...AGACATCAAAAATGGTGCATGCACCGTGAATGTGCTCACAGAGACACGTGCACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR CAA 90 bp AATGAAGCTGAAGGAATCGAGTGGGAGGGACTGTTCTCCTCTTTGGGGGAGCTCCCACCCCTCTGGGAGTaGTACACACCTTTCAGTAGC +
Preference number: 3 (lower is better)
Translates to: NEAEGIEWEGLFSSLGELPPLWE*YTPFSS
Trigger: GCTACTGAAAGGTGTGTACAACTCCCAGAGGGGTGG...GAGCTCCCCCAAAGAGGAGAACAGTCCCTCCCACTCGATTCCTTCAGCTTCATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR CAA 90 bp ACTTTCAGGTCAGCACGAGTGAAGCGTGGTTTCCTGAGCTTGAAGGGCTCTGAACCTGAACCACATTGGTaGACAGGAACTGCAGGCCCC +
Preference number: 3 (lower is better)
Translates to: TFRSARVKRGFLSLKGSEPEPHW*TGTAGP
Trigger: GGGGCCTGCAGTTCCTGTCAACCAATGTGGTTCAGG...TTCAGAGCCCTTCAAGCTCAGGAAACCACGCTTCACTCGTGCTGACCTGAAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR TCA 72 bp TTTGCATGGGGAACAGTGGTGGAAGGGGCACGGTGGTaGTTCAAATTGCAGAGCAGGAAGAGGGCATGCTCA +
Preference number: 3 (lower is better)
Translates to: FAWGTVVEGARW*FKLQSRKRACS
Trigger: TGAGCATGCCCTCTTCCTGCTCTGCAATTTGAATCACCACCGTGCCCCTTCCACCACTGTTCCCCATGCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR TCA 72 bp GCACGGCTAGGATCAAGAATCCTGAACCACATTGGTTaGCAGGAACTGCAGGCCCCCTGGAATTTACCTGGC +
Preference number: 3 (lower is better)
Translates to: ARLGSRILNHIG*QELQAPWNLPG
Trigger: GCCAGGTAAATTCCAGGGGGCCTGCAGTTCCTGTCAACCAATGTGGTTCAGGATTCTTGATCCTAGCCGTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR GCA 72 bp CATCTGTGGAGTGACTGGACCACACACACACACATGTaGGTCCCCCTTGCTCAGGATGTCTGGGTGTATGTA +
Preference number: 3 (lower is better)
Translates to: HLWSDWTTHTHM*VPLAQDVWVYV
Trigger: TACATACACCCAGACATCCTGAGCAAGGGGGACGCACATGTGTGTGTGTGTGGTCCAGTCACTCCACAGATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR GCA 72 bp TGTAGGGCTAGTCCTGGCAATAAGGCCACTCCACTTTaGCTCCAGTCAACTTTTACAGCCACCCCTCTGGGA +
Preference number: 3 (lower is better)
Translates to: CRASPGNKATPL*LQSTFTATPLG
Trigger: TCCCAGAGGGGTGGCTGTAAAAGTTGACTGGAGGCAAAGTGGAGTGGCCTTATTGCCAGGACTAGCCCTACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR CAA 90 bp CACACACATGTGCGTCCCCCTTGCTCAGGATGTCTGGGTGTATGTACGAAGGCAGGAATGGGCAGGTATTaGCTGGTACAAAATGTCGGC +
Preference number: 3 (lower is better)
Translates to: HTHVRPPCSGCLGVCTKAGMGRY*LVQNVG
Trigger: GCCGACATTTTGTACCAGCAAATACCTGCCCATTCC...TGCCTTCGTACATACACCCAGACATCCTGAGCAAGGGGGACGCACATGTGTGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR CAA 90 bp ACTTTCAGGTCAGCACGAGTGAAGCGTGGTTTCCTGAGCTTGAAGGGCTCTGAATGCTCCCACCAAGGGTaGGAATGGGCAGGTATTTGC +
Preference number: 3 (lower is better)
Translates to: TFRSARVKRGFLSLKGSECSHQG*EWAGIC
Trigger: GCAAATACCTGCCCATTCCAACCCTTGGTGGGAGCA...TTCAGAGCCCTTCAAGCTCAGGAAACCACGCTTCACTCGTGCTGACCTGAAAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR CAA 90 bp AACTTTTACAGCCACCCCTCTGGGAGTTGTACACACCTTTCAGTAGCCGAAGGGCTGGAAGCAGAGCTTTaGCATGGGGAACAGTGGTGG +
Preference number: 3 (lower is better)
Translates to: NFYSHPSGSCTHLSVAEGLEAEL*HGEQWW
Trigger: CCACCACTGTTCCCCATGCAAAAGCTCTGCTTCCAG...CCCTTCGGCTACTGAAAGGTGTGTACAACTCCCAGAGGGGTGGCTGTAAAAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR TCA 72 bp CACACAGAGACAGAGAAGGATGCACGCGAATGCACATaGACACACGTGCACACACACACCAGAACGAGCATG +
Preference number: 3 (lower is better)
Translates to: HTETEKDARECT*THVHTHTRTSM
Trigger: CATGCTCGTTCTGGTGTGTGTGTGCACGTGTGTTCATGTGCATTCGCGTGCATCCTTCTCTGTCTCTGTGTG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR GCA 72 bp CATGAACACACGTGCACACACACACCAGAACGAGCATaGCTGGGCAGTTACATGTGCCAGAACACACTGGTA +
Preference number: 3 (lower is better)
Translates to: HEHTCTHTPERA*LGSYMCQNTLV
Trigger: TACCAGTGTGTTCTGGCACATGTAACTGCCCAGGCATGCTCGTTCTGGTGTGTGTGTGCACGTGTGTTCATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR GCA 72 bp GGCACCTCCACACTCTCCACACTCGAGACTTGCAGATaGACGTGTGACGGTGCCATTCTTCGTATATGTTCT +
Preference number: 3 (lower is better)
Translates to: GTSTLSTLETCR*TCDGAILRICS
Trigger: AGAACATATACGAAGAATGGCACCGTCACACGTGCATCTGCAAGTCTCGAGTGTGGAGAGTGTGGAGGTGCC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446273.1
3UTR CCA 72 bp AAAACTAGGGAATGCAGATGTGTAAACCTGCGCTCTTaGACTAACGTGGGTCTGCGTCGCCTGGGTACCTTC +
Preference number: 3 (lower is better)
Translates to: KTRECRCVNLRS*TNVGLRRLGTF
Trigger: GAAGGTACCCAGGCGACGCAGACCCACGTTAGTCCAAGAGCGCAGGTTTACACATCTGCATTCCCTAGTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR CCA 72 bp TGGAATTTACCTGGCCATCAGACCTGCCAGCAACAGTaGCAAGAGGACTCAGAGGTCTCTATCTCACTGTGC +
Preference number: 3 (lower is better)
Translates to: WNLPGHQTCQQQ*QEDSEVSISLC
Trigger: GCACAGTGAGATAGAGACCTCTGAGTCCTCTTGCCACTGTTGCTGGCAGGTCTGATGGCCAGGTAAATTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR CCA 72 bp CACTGCACGGCTAGGATCAAGAATCCTGAACCACATTaGTTGACAGGAACTGCAGGCCCCCTGGAATTTACC +
Preference number: 3 (lower is better)
Translates to: HCTARIKNPEPH*LTGTAGPLEFT
Trigger: GGTAAATTCCAGGGGGCCTGCAGTTCCTGTCAACCAATGTGGTTCAGGATTCTTGATCCTAGCCGTGCAGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR CAA 90 bp ACTAAAGCGGTTTTAGAGAAATTGCAGGCAGCAACCCCACCCACTCCCTTTACCCTGGAAGCAGAGCTTTaGCATGGGGAACAGTGGTGG +
Preference number: 3 (lower is better)
Translates to: TKAVLEKLQAATPPTPFTLEAEL*HGEQWW
Trigger: CCACCACTGTTCCCCATGCAAAAGCTCTGCTTCCAG...GGTAAAGGGAGTGGGTGGGGTTGCTGCCTGCAATTTCTCTAAAACCGCTTTAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR CAA 90 bp CAAAGGGTAAAAGCGTGCTGCCCGCTCTGCACACGGCAGAAGCTGGAAAATGCCAGGAACCCCTTCTATTaGCCCAAGACAAAGAGACTT +
Preference number: 3 (lower is better)
Translates to: QRVKACCPLCTRQKLENARNPFY*PKTKRL
Trigger: AAGTCTCTTTGTCTTGGGCAAATAGAAGGGGTTCCT...GGCATTTTCCAGCTTCTGCCGTGTGCAGAGCGGGCAGCACGCTTTTACCCTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR CAA 90 bp CAAAGGGTAAAAGCGTGCTGCCCGCTCTGCACACGGCAGAAGCTGGAAAATGCCACTTTCGTTACTTTTTaGGGTGGCGGTAGGAGGTTA +
Preference number: 3 (lower is better)
Translates to: QRVKACCPLCTRQKLENATFVTF*GGGRRL
Trigger: TAACCTCCTACCGCCACCCAAAAAAGTAACGAAAGT...GGCATTTTCCAGCTTCTGCCGTGTGCAGAGCGGGCAGCACGCTTTTACCCTTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR CAA 90 bp AACTGCAGGCCCCCTGGAATTTACCTGGCCATCAGACCTGCCAGCAACAGTGGCCTTCCAGGAGGAACTTaGACTTCCCTAATGACTAAA +
Preference number: 3 (lower is better)
Translates to: NCRPPGIYLAIRPASNSGLPGGT*TSLMTK
Trigger: TTTAGTCATTAGGGAAGTCAAAGTTCCTCCTGGAAG...GCCACTGTTGCTGGCAGGTCTGATGGCCAGGTAAATTCCAGGGGGCCTGCAGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR CAA 90 bp AACTGCAGGCCCCCTGGAATTTACCTGGCCATCAGACCTGCCAGCAACAGTGGCTGTGTAATACCCTGTTaGCATCAACAGCAACGTGAT +
Preference number: 3 (lower is better)
Translates to: NCRPPGIYLAIRPASNSGCVIPC*HQQQRD
Trigger: ATCACGTTGCTGTTGATGCAAACAGGGTATTACACA...GCCACTGTTGCTGGCAGGTCTGATGGCCAGGTAAATTCCAGGGGGCCTGCAGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR CAA 90 bp TGTGCACGTGTCTCTGTGAGCACATTCACGGTGCATGCACCATTTTTGATGTCTGCGGTTTTAGAGAAATaGCAGGCAGCAACCCCACCC +
Preference number: 3 (lower is better)
Translates to: CARVSVSTFTVHAPFLMSAVLEK*QAATPP
Trigger: GGGTGGGGTTGCTGCCTGCAATTTCTCTAAAACCGC...AGACATCAAAAATGGTGCATGCACCGTGAATGTGCTCACAGAGACACGTGCACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR CAA 90 bp CCCCTGTCTCCTCTCCCAAGTCCCAGAATCTCTTCCACTCAACTCTACACTGTGTCAACCCACAGGAGTTaGGAAGAACCGATTGCTAAC +
Preference number: 3 (lower is better)
Translates to: PLSPLPSPRISSTQLYTVSTHRS*EEPIAN
Trigger: GTTAGCAATCGGTTCTTCCAAACTCCTGTGGGTTGA...CACAGTGTAGAGTTGAGTGGAAGAGATTCTGGGACTTGGGAGAGGAGACAGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR CAA 90 bp AACTTTTACAGCCACCCCTCTGGGAGTTGTACACACCTTTCAGTAGCCGAAGGGAAAATACACACACCTTaGGCGCTGGCCACAAACCCA +
Preference number: 3 (lower is better)
Translates to: NFYSHPSGSCTHLSVAEGKIHTP*ALATNP
Trigger: TGGGTTTGTGGCCAGCGCCAAAGGTGTGTGTATTTT...CCCTTCGGCTACTGAAAGGTGTGTACAACTCCCAGAGGGGTGGCTGTAAAAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR CAA 90 bp AATGAAGCTGAAGGAATCGAGTGGGAGGGACTGTTCTCCTCTTTGGGGGAGCTCCCACCTTTCCCATTTTaGGCGAACACACATAGGATG +
Preference number: 3 (lower is better)
Translates to: NEAEGIEWEGLFSSLGELPPFPF*ANTHRM
Trigger: CATCCTATGTGTGTTCGCCAAAAATGGGAAAGGTGG...GAGCTCCCCCAAAGAGGAGAACAGTCCCTCCCACTCGATTCCTTCAGCTTCATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR TCA 72 bp CACACTCTCCACACTCGAGACTTGCAGATGCACGTGTaGCGGTGCCATTCTTCGTATATGTTCTGGTGCATC +
Preference number: 3 (lower is better)
Translates to: HTLHTRDLQMHV*RCHSSYMFWCI
Trigger: GATGCACCAGAACATATACGAAGAATGGCACCGTCACACGTGCATCTGCAAGTCTCGAGTGTGGAGAGTGTG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446273.1
3UTR GCA 72 bp CTCAATAGCAGCAAGTTACAGAGGACAGTAGAGGTCTaGTCCCACCAAGGGTTGGAATGGGCAGGTATTTGC +
Preference number: 3 (lower is better)
Translates to: LNSSKLQRTVEV*SHQGLEWAGIC
Trigger: GCAAATACCTGCCCATTCCAACCCTTGGTGGGAGCAGACCTCTACTGTCCTCTGTAACTTGCTGCTATTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR GCA 72 bp ACACAGACTCAAAGGGTAAAAGCGTGCTGCCCGCTCTaGACACGGCAGAAGCTGGAAAATGCCTTGTTTACA +
Preference number: 3 (lower is better)
Translates to: TQTQRVKACCPL*TRQKLENALFT
Trigger: TGTAAACAAGGCATTTTCCAGCTTCTGCCGTGTGCAGAGCGGGCAGCACGCTTTTACCCTTTGAGTCTGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR GCA 72 bp GCTCCAGGTATTGTGTGGAGAACATTCTGGAGTCCCTaGAGGGGATGGATCTGCTGGAAGAGAGAAATTCAG +
Preference number: 3 (lower is better)
Translates to: APGIVWRTFWSP*RGWICWKREIQ
Trigger: CTGAATTTCTCTCTTCCAGCAGATCCATCCCCTGCAGGGACTCCAGAATGTTCTCCACACAATACCTGGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR CCA 72 bp AGGACAGTAGAGGTCTGCTCCCACCAAGGGTTGGAATaGGCAGGTATTTGCTGGTACAAAATGTCGGCACTT +
Preference number: 3 (lower is better)
Translates to: RTVEVCSHQGLE*AGICWYKMSAL
Trigger: AAGTGCCGACATTTTGTACCAGCAAATACCTGCCCATTCCAACCCTTGGTGGGAGCAGACCTCTACTGTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR CCA 72 bp CCTTTATGGGTGAGTATCTTACATCTGTGGAGTGACTaGACCACACACACACACATGTGCGTCCCCCTTGCT +
Preference number: 3 (lower is better)
Translates to: PLWVSILHLWSD*TTHTHMCVPLA
Trigger: AGCAAGGGGGACGCACATGTGTGTGTGTGTGGTCCAGTCACTCCACAGATGTAAGATACTCACCCATAAAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR CCA 72 bp TGTTTGCATCAACAGCAACGTGATGTGACGCCCATGTaGGAATGTAATGGCCGCCTCAGGACACAGACTCAA +
Preference number: 3 (lower is better)
Translates to: CLHQQQRDVTPM*ECNGRLRTQTQ
Trigger: TTGAGTCTGTGTCCTGAGGCGGCCATTACATTCCCACATGGGCGTCACATCACGTTGCTGTTGATGCAAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR CCA 72 bp TGGCCTCTGATATATACAGGACAATCCAAGCTTTGGTaGAAAAGACCCGGCACCTCCACACTCTCCACACTC +
Preference number: 3 (lower is better)
Translates to: WPLIYTGQSKLW*KRPGTSTLSTL
Trigger: GAGTGTGGAGAGTGTGGAGGTGCCGGGTCTTTTCCACCAAAGCTTGGATTGTCCTGTATATATCAGAGGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446273.1
3UTR CCA 72 bp GACTGGCCTCTGATATATACAGGACAATCCAAGCTTTaGTGGAAAAGACCCGGCACCTCCACACTCTCCACA +
Preference number: 3 (lower is better)
Translates to: DWPLIYTGQSKL*WKRPGTSTLST
Trigger: TGTGGAGAGTGTGGAGGTGCCGGGTCTTTTCCACCAAAGCTTGGATTGTCCTGTATATATCAGAGGCCAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446273.1
3UTR-3UTR CAA 90 bp CAAAGGGTAAAAGCGTGCTGCCCGCTCTGCACACGGCAGAAGCTGGAAAATGCCCATTGTCTTTCTAGGTaGGCGTTCATGATTCAAGTA +
Preference number: 3 (lower is better)
Translates to: QRVKACCPLCTRQKLENAHCLSR*AFMIQV
Trigger: TACTTGAATCATGAACGCCAACCTAGAAAGACAATG...GGCATTTTCCAGCTTCTGCCGTGTGCAGAGCGGGCAGCACGCTTTTACCCTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR CAA 90 bp CCCCTGTCTCCTCTCCCAAGTCCCAGAATCTCTTCCACTCAACTCTACACTGTGGACACAGGAAGGAACTaGGCATTCTACATTACTGAG +
Preference number: 3 (lower is better)
Translates to: PLSPLPSPRISSTQLYTVDTGRN*AFYITE
Trigger: CTCAGTAATGTAGAATGCCAAGTTCCTTCCTGTGTC...CACAGTGTAGAGTTGAGTGGAAGAGATTCTGGGACTTGGGAGAGGAGACAGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR CAA 90 bp AATGAAGCTGAAGGAATCGAGTGGGAGGGACTGTTCTCCTCTTTGGGGGAGCTCAGGAACCCCTTCTATTaGCCCAAGACAAAGAGACTT +
Preference number: 3 (lower is better)
Translates to: NEAEGIEWEGLFSSLGELRNPFY*PKTKRL
Trigger: AAGTCTCTTTGTCTTGGGCAAATAGAAGGGGTTCCT...GAGCTCCCCCAAAGAGGAGAACAGTCCCTCCCACTCGATTCCTTCAGCTTCATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR CAA 90 bp GGGTTTATCTTAAAGATGGGGGCGAAGGGGGTGTCTGCAAAGAAGCAATTCAAAACACCTCGCAGCTCATaGGCTTCATACAGCCTGCCA +
Preference number: 3 (lower is better)
Translates to: GFILKMGAKGVSAKKQFKTPRSS*ASYSLP
Trigger: TGGCAGGCTGTATGAAGCCAATGAGCTGCGAGGTGT...TTTGAATTGCTTCTTTGCAGACACCCCCTTCGCCCCCATCTTTAAGATAAACCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR TCA 72 bp GGGCCTGTCCAGAACCACTCCAATTTCCTTTATGGGTaGGTATCTTACATCTGTGGAGTGACTGGACCACAC +
Preference number: 3 (lower is better)
Translates to: GPVQNHSNFLYG*VSYICGVTGPH
Trigger: GTGTGGTCCAGTCACTCCACAGATGTAAGATACTCACCCATAAAGGAAATTGGAGTGGTTCTGGACAGGCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR TCA 72 bp GGGCGAAGGGGGTGTCTGCAAAGAAGCAATTCAAAATaGTCCATTCCAACCCTGCTTCATGGGTGCCCAAAT +
Preference number: 3 (lower is better)
Translates to: GRRGCLQRSNSK*SIPTLLHGCPN
Trigger: ATTTGGGCACCCATGAAGCAGGGTTGGAATGGATCATTTTGAATTGCTTCTTTGCAGACACCCCCTTCGCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR GCA 72 bp CACACACCAGAACGAGCATGCCTGGGCAGTTACATGTaGCAGAACACACTGGTATTTATCAACCAGCCAATC +
Preference number: 3 (lower is better)
Translates to: HTPERACLGSYM*QNTLVFINQPI
Trigger: GATTGGCTGGTTGATAAATACCAGTGTGTTCTGGCACATGTAACTGCCCAGGCATGCTCGTTCTGGTGTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR GCA 72 bp AAGCACTCTGTTCATCTTAATGCAGCCCAATGGAGTTaGTTTAGTAGCAGTGGCTCTCCGGGCCTGTGTGTT +
Preference number: 3 (lower is better)
Translates to: KHSVHLNAAQWS*FSSSGSPGLCV
Trigger: AACACACAGGCCCGGAGAGCCACTGCTACTAAAGCAACTCCATTGGGCTGCATTAAGATGAACAGAGTGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR GCA 72 bp GATGCCAAGTGTGACCACCTACCCACAGAGGGCTCATaGAGGCTTGTATATGTGAACACTCACTTGAGTCAT +
Preference number: 3 (lower is better)
Translates to: DAKCDHLPTEGS*RLVYVNTHLSH
Trigger: ATGACTCAAGTGAGTGTTCACATATACAAGCCTGCATGAGCCCTCTGTGGGTAGGTGGTCACACTTGGCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR GCA 72 bp TGGAGAACATTCTGGAGTCCCTGCAGGGGATGGATCTaGTGGAAGAGAGAAATTCAGACACTTCTTACCCTG +
Preference number: 3 (lower is better)
Translates to: WRTFWSPCRGWI*WKREIQTLLTL
Trigger: CAGGGTAAGAAGTGTCTGAATTTCTCTCTTCCAGCAGATCCATCCCCTGCAGGGACTCCAGAATGTTCTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR CCA 72 bp AACACACGTGCACACACACACCAGAACGAGCATGCCTaGGCAGTTACATGTGCCAGAACACACTGGTATTTA +
Preference number: 3 (lower is better)
Translates to: NTRAHTHQNEHA*AVTCARTHWYL
Trigger: TAAATACCAGTGTGTTCTGGCACATGTAACTGCCCAGGCATGCTCGTTCTGGTGTGTGTGTGCACGTGTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR CAA 90 bp ACTAAAGCGGTTTTAGAGAAATTGCAGGCAGCAACCCCACCCACTCCCTTTACCGAAATAAACACACCGTaGCTCCAAGAGGTACCTCCT +
Preference number: 3 (lower is better)
Translates to: TKAVLEKLQAATPPTPFTEINTP*LQEVPP
Trigger: AGGAGGTACCTCTTGGAGCAACGGTGTGTTTATTTC...GGTAAAGGGAGTGGGTGGGGTTGCTGCCTGCAATTTCTCTAAAACCGCTTTAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR CAA 90 bp TTAAGGGTTTACATTGCAGGGGGAAATGTACCTCGAGGTATTATTTTGTGTGAGCCGCACGACAGCACTTaGCTCCACACAGAGAGCGGT +
Preference number: 3 (lower is better)
Translates to: LRVYIAGGNVPRGIILCEPHDST*LHTESG
Trigger: ACCGCTCTCTGTGTGGAGCAAAGTGCTGTCGTGCGG...CTCACACAAAATAATACCTCGAGGTACATTTCCCCCTGCAATGTAAACCCTTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR CAA 90 bp TCCCTAATGACTAAAGCTGACCGTCTGTTTGTTTGTATCCAACGGATAGCTTCTACATGTGCGTCCCCCTaGCTCAGGATGTCTGGGTGT +
Preference number: 3 (lower is better)
Translates to: SLMTKADRLFVCIQRIASTCASP*LRMSGC
Trigger: ACACCCAGACATCCTGAGCAAGGGGGACGCACATGT...AGAAGCTATCCGTTGGATACAAACAAACAGACGGTCAGCTTTAGTCATTAGGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR CAA 90 bp ACTTTCAGGTCAGCACGAGTGAAGCGTGGTTTCCTGAGCTTGAAGGGCTCTGAACTTGGCGTAAGCATTTaGCTCAGCATGCAGACATTT +
Preference number: 3 (lower is better)
Translates to: TFRSARVKRGFLSLKGSELGVSI*LSMQTF
Trigger: AAATGTCTGCATGCTGAGCAAAATGCTTACGCCAAG...TTCAGAGCCCTTCAAGCTCAGGAAACCACGCTTCACTCGTGCTGACCTGAAAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR CAA 90 bp CAAAGGGTAAAAGCGTGCTGCCCGCTCTGCACACGGCAGAAGCTGGAAAATGCCAAGACTGACAATTCATaGTATACACACAGACCAGAA +
Preference number: 3 (lower is better)
Translates to: QRVKACCPLCTRQKLENAKTDNS*YTHRPE
Trigger: TTCTGGTCTGTGTGTATACAATGAATTGTCAGTCTT...GGCATTTTCCAGCTTCTGCCGTGTGCAGAGCGGGCAGCACGCTTTTACCCTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR CAA 90 bp ACTTTCAGGTCAGCACGAGTGAAGCGTGGTTTCCTGAGCTTGAAGGGCTCTGAAGTATCTGTGTGTTTCTaGACTGTATGGACTCCCTGT +
Preference number: 3 (lower is better)
Translates to: TFRSARVKRGFLSLKGSEVSVCF*TVWTPC
Trigger: ACAGGGAGTCCATACAGTCAAGAAACACACAGATAC...TTCAGAGCCCTTCAAGCTCAGGAAACCACGCTTCACTCGTGCTGACCTGAAAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR CAA 90 bp TGTGCACGTGTCTCTGTGAGCACATTCACGGTGCATGCACCATTTTTGATGTCTAAAATACACACACCTTaGGCGCTGGCCACAAACCCA +
Preference number: 3 (lower is better)
Translates to: CARVSVSTFTVHAPFLMSKIHTP*ALATNP
Trigger: TGGGTTTGTGGCCAGCGCCAAAGGTGTGTGTATTTT...AGACATCAAAAATGGTGCATGCACCGTGAATGTGCTCACAGAGACACGTGCACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR CAA 90 bp CCCCTGTCTCCTCTCCCAAGTCCCAGAATCTCTTCCACTCAACTCTACACTGTGCTTGACAACTTTCTTTaGCAGCTTACTGTGAGCAGT +
Preference number: 3 (lower is better)
Translates to: PLSPLPSPRISSTQLYTVLDNFL*QLTVSS
Trigger: ACTGCTCACAGTAAGCTGCAAAAGAAAGTTGTCAAG...CACAGTGTAGAGTTGAGTGGAAGAGATTCTGGGACTTGGGAGAGGAGACAGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR CAA 90 bp GGATTTTTGCTGTACCTTCCTGTTACCTGTTTGTGTGCAAAGTTGGAAAGCTGCCCACCCCTCTGGGAGTaGTACACACCTTTCAGTAGC +
Preference number: 3 (lower is better)
Translates to: GFLLYLPVTCLCAKLESCPPLWE*YTPFSS
Trigger: GCTACTGAAAGGTGTGTACAACTCCCAGAGGGGTGG...GCAGCTTTCCAACTTTGCACACAAACAGGTAACAGGAAGGTACAGCAAAAATCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR TCA 72 bp ATTTCCTTTATGGGTGAGTATCTTACATCTGTGGAGTaGCTGGACCACACACACACACATGTGCGTCCCCCT +
Preference number: 3 (lower is better)
Translates to: ISFMGEYLTSVE*LDHTHTHVRPP
Trigger: AGGGGGACGCACATGTGTGTGTGTGTGGTCCAGTCACTCCACAGATGTAAGATACTCACCCATAAAGGAAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR GCA 72 bp CTGCAGTTGTCACAATTACACACCTGGAGGAATCAATaGACAGTAATGGAGGGCACACGACACAGGAAGGAA +
Preference number: 3 (lower is better)
Translates to: LQLSQLHTWRNQ*TVMEGTRHRKE
Trigger: TTCCTTCCTGTGTCGTGTGCCCTCCATTACTGTGCATTGATTCCTCCAGGTGTGTAATTGTGACAACTGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR GCA 72 bp ACTGACAGCTTAAAAACTACTCAAATATTAGGGGTATaGCACAATCACTCGGGATCTGGTCCCGGTGGCCAC +
Preference number: 3 (lower is better)
Translates to: TDSLKTTQILGV*HNHSGSGPGGH
Trigger: GTGGCCACCGGGACCAGATCCCGAGTGATTGTGGCATACCCCTAATATTTGAGTAGTTTTTAAGCTGTCAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR GCA 72 bp GAAGAGGTGAGGATGCACATGGCTTTCAGGGTGGTTTaGACATCTCCTTACACAAGTTTCCTCCCAAGTAAG +
Preference number: 3 (lower is better)
Translates to: EEVRMHMAFRVV*TSPYTSFLPSK
Trigger: CTTACTTGGGAGGAAACTTGTGTAAGGAGATGTGCAAACCACCCTGAAAGCCATGTGCATCCTCACCTCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR CCA 72 bp ATGTCGGCACTTTATGTTAAACAGCATAATGCAGACTaGGATGTCCACACAAGTGCTAGCACGTCACCGGCA +
Preference number: 3 (lower is better)
Translates to: MSALYVKQHNAD*DVHTSASTSPA
Trigger: TGCCGGTGACGTGCTAGCACTTGTGTGGACATCCCAGTCTGCATTATGCTGTTTAACATAAAGTGCCGACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR CAA 90 bp CACACACATGTGCGTCCCCCTTGCTCAGGATGTCTGGGTGTATGTACGAAGGCAAGAATTTCCCATTCTTaGTCTCACAAAACCACTGAA +
Preference number: 3 (lower is better)
Translates to: HTHVRPPCSGCLGVCTKARISHS*SHKTTE
Trigger: TTCAGTGGTTTTGTGAGACAAAGAATGGGAAATTCT...TGCCTTCGTACATACACCCAGACATCCTGAGCAAGGGGGACGCACATGTGTGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR CAA 90 bp ACTTTCAGGTCAGCACGAGTGAAGCGTGGTTTCCTGAGCTTGAAGGGCTCTGAATATGTGAACACTCACTaGAGTCATGCCTGTCAATCT +
Preference number: 3 (lower is better)
Translates to: TFRSARVKRGFLSLKGSEYVNTH*SHACQS
Trigger: AGATTGACAGGCATGACTCAAGTGAGTGTTCACATA...TTCAGAGCCCTTCAAGCTCAGGAAACCACGCTTCACTCGTGCTGACCTGAAAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR CAA 90 bp TGTGCACGTGTCTCTGTGAGCACATTCACGGTGCATGCACCATTTTTGATGTCTTCAACCCACAGGAGTTaGGAAGAACCGATTGCTAAC +
Preference number: 3 (lower is better)
Translates to: CARVSVSTFTVHAPFLMSSTHRS*EEPIAN
Trigger: GTTAGCAATCGGTTCTTCCAAACTCCTGTGGGTTGA...AGACATCAAAAATGGTGCATGCACCGTGAATGTGCTCACAGAGACACGTGCACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR CAA 90 bp ACTTTCAGGTCAGCACGAGTGAAGCGTGGTTTCCTGAGCTTGAAGGGCTCTGAATTTTGCAAAGACCCTTaGGCCAAGGTAGTACCATTT +
Preference number: 3 (lower is better)
Translates to: TFRSARVKRGFLSLKGSEFCKDP*AKVVPF
Trigger: AAATGGTACTACCTTGGCCAAAGGGTCTTTGCAAAA...TTCAGAGCCCTTCAAGCTCAGGAAACCACGCTTCACTCGTGCTGACCTGAAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR CAA 90 bp AATGAAGCTGAAGGAATCGAGTGGGAGGGACTGTTCTCCTCTTTGGGGGAGCTCAAGCTGGAAAATGCCTaGTTTACATGCATGAATGTG +
Preference number: 3 (lower is better)
Translates to: NEAEGIEWEGLFSSLGELKLENA*FTCMNV
Trigger: CACATTCATGCATGTAAACAAGGCATTTTCCAGCTT...GAGCTCCCCCAAAGAGGAGAACAGTCCCTCCCACTCGATTCCTTCAGCTTCATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR CAA 90 bp TGTGCACGTGTCTCTGTGAGCACATTCACGGTGCATGCACCATTTTTGATGTCTGATCAGCAAAGCCCTTaGGGAGCATTGTACAAGAGA +
Preference number: 3 (lower is better)
Translates to: CARVSVSTFTVHAPFLMSDQQSP*GALYKR
Trigger: TCTCTTGTACAATGCTCCCAAAGGGCTTTGCTGATC...AGACATCAAAAATGGTGCATGCACCGTGAATGTGCTCACAGAGACACGTGCACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR CAA 90 bp ACTAAAGCGGTTTTAGAGAAATTGCAGGCAGCAACCCCACCCACTCCCTTTACCGAAAGAAAAACTCCCTaGTCCTCAATAGCAGCAAGT +
Preference number: 3 (lower is better)
Translates to: TKAVLEKLQAATPPTPFTERKTP*SSIAAS
Trigger: ACTTGCTGCTATTGAGGACAAGGGAGTTTTTCTTTC...GGTAAAGGGAGTGGGTGGGGTTGCTGCCTGCAATTTCTCTAAAACCGCTTTAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR CAA 90 bp CCCCTGTCTCCTCTCCCAAGTCCCAGAATCTCTTCCACTCAACTCTACACTGTGAGAATTTCCCATTCTTaGTCTCACAAAACCACTGAA +
Preference number: 3 (lower is better)
Translates to: PLSPLPSPRISSTQLYTVRISHS*SHKTTE
Trigger: TTCAGTGGTTTTGTGAGACAAAGAATGGGAAATTCT...CACAGTGTAGAGTTGAGTGGAAGAGATTCTGGGACTTGGGAGAGGAGACAGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR CAA 90 bp AACTTTTACAGCCACCCCTCTGGGAGTTGTACACACCTTTCAGTAGCCGAAGGGGTTTGGAAGAACCGATaGCTAACTTATGCTACATTC +
Preference number: 3 (lower is better)
Translates to: NFYSHPSGSCTHLSVAEGVWKNR*LTYATF
Trigger: GAATGTAGCATAAGTTAGCAATCGGTTCTTCCAAAC...CCCTTCGGCTACTGAAAGGTGTGTACAACTCCCAGAGGGGTGGCTGTAAAAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR CAA 90 bp GGATTTTTGCTGTACCTTCCTGTTACCTGTTTGTGTGCAAAGTTGGAAAGCTGCAAAATACACACACCTTaGGCGCTGGCCACAAACCCA +
Preference number: 3 (lower is better)
Translates to: GFLLYLPVTCLCAKLESCKIHTP*ALATNP
Trigger: TGGGTTTGTGGCCAGCGCCAAAGGTGTGTGTATTTT...GCAGCTTTCCAACTTTGCACACAAACAGGTAACAGGAAGGTACAGCAAAAATCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR CAA 90 bp ACTTTCAGGTCAGCACGAGTGAAGCGTGGTTTCCTGAGCTTGAAGGGCTCTGAACCCAACTTGTTGATATaGGCTAGATATGGGTCAATT +
Preference number: 3 (lower is better)
Translates to: TFRSARVKRGFLSLKGSEPNLLI*ARYGSI
Trigger: AATTGACCCATATCTAGCCAATATCAACAAGTTGGG...TTCAGAGCCCTTCAAGCTCAGGAAACCACGCTTCACTCGTGCTGACCTGAAAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR CAA 90 bp ACTTTCAGGTCAGCACGAGTGAAGCGTGGTTTCCTGAGCTTGAAGGGCTCTGAAAAGCTGGAAAATGCCTaGTTTACATGCATGAATGTG +
Preference number: 3 (lower is better)
Translates to: TFRSARVKRGFLSLKGSEKLENA*FTCMNV
Trigger: CACATTCATGCATGTAAACAAGGCATTTTCCAGCTT...TTCAGAGCCCTTCAAGCTCAGGAAACCACGCTTCACTCGTGCTGACCTGAAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR CAA 90 bp TGTGCACGTGTCTCTGTGAGCACATTCACGGTGCATGCACCATTTTTGATGTCTATCACTGCATACACTTaGGTCACTGGTGTGTGCAAA +
Preference number: 3 (lower is better)
Translates to: CARVSVSTFTVHAPFLMSITAYT*VTGVCK
Trigger: TTTGCACACACCAGTGACCAAAGTGTATGCAGTGAT...AGACATCAAAAATGGTGCATGCACCGTGAATGTGCTCACAGAGACACGTGCACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR TCA 72 bp GCCAAAGAATACCACGGAAAGAGCTCTTCTCTTCCATaGCATCCTCACCATATCCTGTTCTTAGGTCACTGC +
Preference number: 3 (lower is better)
Translates to: AKEYHGKSSSLP*HPHHILFLGHC
Trigger: GCAGTGACCTAAGAACAGGATATGGTGAGGATGTCATGGAAGAGAAGAGCTCTTTCCGTGGTATTCTTTGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR GCA 72 bp TTGTGCACGTGTCTCTGTGAGCACATTCACGGTGCATaGACCATTTTTGATGTCTTCTGTGAGATCACTGCA +
Preference number: 3 (lower is better)
Translates to: LCTCLCEHIHGA*TIFDVFCEITA
Trigger: TGCAGTGATCTCACAGAAGACATCAAAAATGGTGCATGCACCGTGAATGTGCTCACAGAGACACGTGCACAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR CCA 72 bp ATTAAAAAGCACTCTGTTCATCTTAATGCAGCCCAATaGAGTTGCTTTAGTAGCAGTGGCTCTCCGGGCCTG +
Preference number: 3 (lower is better)
Translates to: IKKHSVHLNAAQ*SCFSSSGSPGL
Trigger: CAGGCCCGGAGAGCCACTGCTACTAAAGCAACTCCATTGGGCTGCATTAAGATGAACAGAGTGCTTTTTAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR CCA 72 bp CTCCAATTTCCTTTATGGGTGAGTATCTTACATCTGTaGAGTGACTGGACCACACACACACACATGTGCGTC +
Preference number: 3 (lower is better)
Translates to: LQFPLWVSILHL*SDWTTHTHMCV
Trigger: GACGCACATGTGTGTGTGTGTGGTCCAGTCACTCCACAGATGTAAGATACTCACCCATAAAGGAAATTGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR CAA 90 bp TCCCTAATGACTAAAGCTGACCGTCTGTTTGTTTGTATCCAACGGATAGCTTCTGGAATGGGCAGGTATTaGCTGGTACAAAATGTCGGC +
Preference number: 3 (lower is better)
Translates to: SLMTKADRLFVCIQRIASGMGRY*LVQNVG
Trigger: GCCGACATTTTGTACCAGCAAATACCTGCCCATTCC...AGAAGCTATCCGTTGGATACAAACAAACAGACGGTCAGCTTTAGTCATTAGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR CAA 90 bp TGTGCACGTGTCTCTGTGAGCACATTCACGGTGCATGCACCATTTTTGATGTCTGAAAGAAAAACTCCCTaGTCCTCAATAGCAGCAAGT +
Preference number: 3 (lower is better)
Translates to: CARVSVSTFTVHAPFLMSERKTP*SSIAAS
Trigger: ACTTGCTGCTATTGAGGACAAGGGAGTTTTTCTTTC...AGACATCAAAAATGGTGCATGCACCGTGAATGTGCTCACAGAGACACGTGCACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR CAA 90 bp TGTGCACGTGTCTCTGTGAGCACATTCACGGTGCATGCACCATTTTTGATGTCTTATGTGAACACTCACTaGAGTCATGCCTGTCAATCT +
Preference number: 3 (lower is better)
Translates to: CARVSVSTFTVHAPFLMSYVNTH*SHACQS
Trigger: AGATTGACAGGCATGACTCAAGTGAGTGTTCACATA...AGACATCAAAAATGGTGCATGCACCGTGAATGTGCTCACAGAGACACGTGCACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR CAA 90 bp GGGTTTATCTTAAAGATGGGGGCGAAGGGGGTGTCTGCAAAGAAGCAATTCAAACTTGGCGTAAGCATTTaGCTCAGCATGCAGACATTT +
Preference number: 3 (lower is better)
Translates to: GFILKMGAKGVSAKKQFKLGVSI*LSMQTF
Trigger: AAATGTCTGCATGCTGAGCAAAATGCTTACGCCAAG...TTTGAATTGCTTCTTTGCAGACACCCCCTTCGCCCCCATCTTTAAGATAAACCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR CAA 90 bp TCTGAACCAAGAAAGGTTGAGAGCTCCAGGTATTGTGTGGAGAACATTCTGGAGGAAGAGAAAACTTTTTaGCCTGACAAGCAACAGCCC +
Preference number: 3 (lower is better)
Translates to: SEPRKVESSRYCVENILEEEKTF*PDKQQP
Trigger: GGGCTGTTGCTTGTCAGGCAAAAAAGTTTTCTCTTC...CTCCAGAATGTTCTCCACACAATACCTGGAGCTCTCAACCTTTCTTGGTTCAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR TCA 72 bp TTCCGTTCCCATTTCAAACTAACGAAAAGGCCTGCATaGAACTTAACAGATACTCAGATGTGCCTGGTGGCC +
Preference number: 3 (lower is better)
Translates to: FRSHFKLTKRPA*NLTDTQMCLVA
Trigger: GGCCACCAGGCACATCTGAGTATCTGTTAAGTTTCATGCAGGCCTTTTCGTTAGTTTGAAATGGGAACGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR CCA 72 bp TGCTCCCACCAAGGGTTGGAATGGGCAGGTATTTGCTaGTACAAAATGTCGGCACTTTATGTTAAACAGCAT +
Preference number: 3 (lower is better)
Translates to: CSHQGLEWAGIC*YKMSALYVKQH
Trigger: ATGCTGTTTAACATAAAGTGCCGACATTTTGTACCAGCAAATACCTGCCCATTCCAACCCTTGGTGGGAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR CAA 90 bp ACTAAAGCGGTTTTAGAGAAATTGCAGGCAGCAACCCCACCCACTCCCTTTACCAGAATTTCCCATTCTTaGTCTCACAAAACCACTGAA +
Preference number: 3 (lower is better)
Translates to: TKAVLEKLQAATPPTPFTRISHS*SHKTTE
Trigger: TTCAGTGGTTTTGTGAGACAAAGAATGGGAAATTCT...GGTAAAGGGAGTGGGTGGGGTTGCTGCCTGCAATTTCTCTAAAACCGCTTTAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR CAA 90 bp GGATTTTTGCTGTACCTTCCTGTTACCTGTTTGTGTGCAAAGTTGGAAAGCTGCTCCAAATCACTGCAGTaGTCACAATTACACACCTGG +
Preference number: 3 (lower is better)
Translates to: GFLLYLPVTCLCAKLESCSKSLQ*SQLHTW
Trigger: CCAGGTGTGTAATTGTGACAACTGCAGTGATTTGGA...GCAGCTTTCCAACTTTGCACACAAACAGGTAACAGGAAGGTACAGCAAAAATCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR CAA 90 bp GGATTTTTGCTGTACCTTCCTGTTACCTGTTTGTGTGCAAAGTTGGAAAGCTGCAGGAACCCCTTCTATTaGCCCAAGACAAAGAGACTT +
Preference number: 3 (lower is better)
Translates to: GFLLYLPVTCLCAKLESCRNPFY*PKTKRL
Trigger: AAGTCTCTTTGTCTTGGGCAAATAGAAGGGGTTCCT...GCAGCTTTCCAACTTTGCACACAAACAGGTAACAGGAAGGTACAGCAAAAATCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR CAA 90 bp GGATTTTTGCTGTACCTTCCTGTTACCTGTTTGTGTGCAAAGTTGGAAAGCTGCAGTGCTTCTTTTCTTTaGGCTACTCGTGTGGTAGGT +
Preference number: 3 (lower is better)
Translates to: GFLLYLPVTCLCAKLESCSASFL*ATRVVG
Trigger: ACCTACCACACGAGTAGCCAAAAGAAAAGAAGCACT...GCAGCTTTCCAACTTTGCACACAAACAGGTAACAGGAAGGTACAGCAAAAATCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR CAA 90 bp TGTGCACGTGTCTCTGTGAGCACATTCACGGTGCATGCACCATTTTTGATGTCTCCCAACTTGTTGATATaGGCTAGATATGGGTCAATT +
Preference number: 3 (lower is better)
Translates to: CARVSVSTFTVHAPFLMSPNLLI*ARYGSI
Trigger: AATTGACCCATATCTAGCCAATATCAACAAGTTGGG...AGACATCAAAAATGGTGCATGCACCGTGAATGTGCTCACAGAGACACGTGCACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR CAA 90 bp TCTGAACCAAGAAAGGTTGAGAGCTCCAGGTATTGTGTGGAGAACATTCTGGAGAACCATCCCAACTTGTaGATATTGGCTAGATATGGG +
Preference number: 3 (lower is better)
Translates to: SEPRKVESSRYCVENILENHPNL*ILARYG
Trigger: CCCATATCTAGCCAATATCAACAAGTTGGGATGGTT...CTCCAGAATGTTCTCCACACAATACCTGGAGCTCTCAACCTTTCTTGGTTCAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR GCA 72 bp AAGGACAAGAGCAGAACAACAGGAACCCCTTCTATTTaGCCAAGACAAAGAGACTTTCCAAATCACTGCAGT +
Preference number: 3 (lower is better)
Translates to: KDKSRTTGTPSI*PRQRDFPNHCS
Trigger: ACTGCAGTGATTTGGAAAGTCTCTTTGTCTTGGGCAAATAGAAGGGGTTCCTGTTGTTCTGCTCTTGTCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR CCA 72 bp ACACTTCTTACCCTGGCACTAGATTGCTGGAAGAGATaGCAGCTATTTAAGACAGGGTTTTTGTGTGTGTGT +
Preference number: 3 (lower is better)
Translates to: TLLTLALDCWKR*QLFKTGFLCVC
Trigger: ACACACACACAAAAACCCTGTCTTAAATAGCTGCCATCTCTTCCAGCAATCTAGTGCCAGGGTAAGAAGTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR CCA 72 bp AAGCAATTCAAAATGATCCATTCCAACCCTGCTTCATaGGTGCCCAAATCTAGGCAAGCAATAGCTGACAGA +
Preference number: 3 (lower is better)
Translates to: KQFKMIHSNPAS*VPKSRQAIADR
Trigger: TCTGTCAGCTATTGCTTGCCTAGATTTGGGCACCCATGAAGCAGGGTTGGAATGGATCATTTTGAATTGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR CAA 90 bp TCTGAACCAAGAAAGGTTGAGAGCTCCAGGTATTGTGTGGAGAACATTCTGGAGGTTTGGAAGAACCGATaGCTAACTTATGCTACATTC +
Preference number: 3 (lower is better)
Translates to: SEPRKVESSRYCVENILEVWKNR*LTYATF
Trigger: GAATGTAGCATAAGTTAGCAATCGGTTCTTCCAAAC...CTCCAGAATGTTCTCCACACAATACCTGGAGCTCTCAACCTTTCTTGGTTCAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR CAA 90 bp TGTGCACGTGTCTCTGTGAGCACATTCACGGTGCATGCACCATTTTTGATGTCTAAGACTGACAATTCATaGTATACACACAGACCAGAA +
Preference number: 3 (lower is better)
Translates to: CARVSVSTFTVHAPFLMSKTDNS*YTHRPE
Trigger: TTCTGGTCTGTGTGTATACAATGAATTGTCAGTCTT...AGACATCAAAAATGGTGCATGCACCGTGAATGTGCTCACAGAGACACGTGCACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR CAA 90 bp GGATTTTTGCTGTACCTTCCTGTTACCTGTTTGTGTGCAAAGTTGGAAAGCTGCCCTCGAGGTATTATTTaGTGTGAGACAGTTGAAACG +
Preference number: 3 (lower is better)
Translates to: GFLLYLPVTCLCAKLESCPRGII*CETVET
Trigger: CGTTTCAACTGTCTCACACAAAATAATACCTCGAGG...GCAGCTTTCCAACTTTGCACACAAACAGGTAACAGGAAGGTACAGCAAAAATCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR CAA 90 bp TGTGCACGTGTCTCTGTGAGCACATTCACGGTGCATGCACCATTTTTGATGTCTTTTAAGACAGGGTTTTaGTGTGTGTGTGTGTCTTTT +
Preference number: 3 (lower is better)
Translates to: CARVSVSTFTVHAPFLMSFKTGF*CVCVSF
Trigger: AAAAGACACACACACACACAAAAACCCTGTCTTAAA...AGACATCAAAAATGGTGCATGCACCGTGAATGTGCTCACAGAGACACGTGCACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR GCA 72 bp GCTGGCCACAAACCCACAGACTGTTATCACAGGGTCTaGACTAACTCTGGAAATCTAGATAATATTCTGTTT +
Preference number: 3 (lower is better)
Translates to: AGHKPTDCYHRV*TNSGNLDNILF
Trigger: AAACAGAATATTATCTAGATTTCCAGAGTTAGTGCAGACCCTGTGATAACAGTCTGTGGGTTTGTGGCCAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR GCA 72 bp AGAGAAATTCAGACACTTCTTACCCTGGCACTAGATTaGTGGAAGAGATGGCAGCTATTTAAGACAGGGTTT +
Preference number: 3 (lower is better)
Translates to: REIQTLLTLALD*WKRWQLFKTGF
Trigger: AAACCCTGTCTTAAATAGCTGCCATCTCTTCCAGCAATCTAGTGCCAGGGTAAGAAGTGTCTGAATTTCTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR CCA 72 bp CACAGTAATGGAGGGCACACGACACAGGAAGGAACTTaGCATTCTACATTACTGAGACATAAGCATATTAAC +
Preference number: 3 (lower is better)
Translates to: HSNGGHTTQEGT*HSTLLRHKHIN
Trigger: GTTAATATGCTTATGTCTCAGTAATGTAGAATGCCAAGTTCCTTCCTGTGTCGTGTGCCCTCCATTACTGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR CCA 72 bp GAAATTCAGACACTTCTTACCCTGGCACTAGATTGCTaGAAGAGATGGCAGCTATTTAAGACAGGGTTTTTG +
Preference number: 3 (lower is better)
Translates to: EIQTLLTLALDC*KRWQLFKTGFL
Trigger: CAAAAACCCTGTCTTAAATAGCTGCCATCTCTTCCAGCAATCTAGTGCCAGGGTAAGAAGTGTCTGAATTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR CAA 90 bp TTAAGGGTTTACATTGCAGGGGGAAATGTACCTCGAGGTATTATTTTGTGTGAGCTTGGCGTAAGCATTTaGCTCAGCATGCAGACATTT +
Preference number: 3 (lower is better)
Translates to: LRVYIAGGNVPRGIILCELGVSI*LSMQTF
Trigger: AAATGTCTGCATGCTGAGCAAAATGCTTACGCCAAG...CTCACACAAAATAATACCTCGAGGTACATTTCCCCCTGCAATGTAAACCCTTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR CAA 90 bp GGATTTTTGCTGTACCTTCCTGTTACCTGTTTGTGTGCAAAGTTGGAAAGCTGCAAGCTGGAAAATGCCTaGTTTACATGCATGAATGTG +
Preference number: 3 (lower is better)
Translates to: GFLLYLPVTCLCAKLESCKLENA*FTCMNV
Trigger: CACATTCATGCATGTAAACAAGGCATTTTCCAGCTT...GCAGCTTTCCAACTTTGCACACAAACAGGTAACAGGAAGGTACAGCAAAAATCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR CAA 90 bp TTAAGGGTTTACATTGCAGGGGGAAATGTACCTCGAGGTATTATTTTGTGTGAGGAAGAGAAAACTTTTTaGCCTGACAAGCAACAGCCC +
Preference number: 3 (lower is better)
Translates to: LRVYIAGGNVPRGIILCEEEKTF*PDKQQP
Trigger: GGGCTGTTGCTTGTCAGGCAAAAAAGTTTTCTCTTC...CTCACACAAAATAATACCTCGAGGTACATTTCCCCCTGCAATGTAAACCCTTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR GCA 72 bp TATCTTCCGTTCCCATTTCAAACTAACGAAAAGGCCTaGATGAAACTTAACAGATACTCAGATGTGCCTGGT +
Preference number: 3 (lower is better)
Translates to: YLPFPFQTNEKA*MKLNRYSDVPG
Trigger: ACCAGGCACATCTGAGTATCTGTTAAGTTTCATGCAGGCCTTTTCGTTAGTTTGAAATGGGAACGGAAGATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR GCA 72 bp ACCCACAGGAGTTTGGAAGAACCGATTGCTAACTTATaGTACATTCATGTCAGAAGAGGTGGGAAAATTCTT +
Preference number: 3 (lower is better)
Translates to: THRSLEEPIANL*YIHVRRGGKIL
Trigger: AAGAATTTTCCCACCTCTTCTGACATGAATGTAGCATAAGTTAGCAATCGGTTCTTCCAAACTCCTGTGGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR GCA 72 bp CAAGTCCCAGAATCTCTTCCACTCAACTCTACACTGTaGAATATTGATGCTAATGAAATCTCAACAGCTGCT +
Preference number: 3 (lower is better)
Translates to: QVPESLPLNSTL*NIDANEISTAA
Trigger: AGCAGCTGTTGAGATTTCATTAGCATCAATATTGCACAGTGTAGAGTTGAGTGGAAGAGATTCTGGGACTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR GCA 72 bp TGCACACGGCAGAAGCTGGAAAATGCCTTGTTTACATaGATGAATGTGTCACAAGTATCACCATATTCCAAT +
Preference number: 3 (lower is better)
Translates to: CTRQKLENALFT*MNVSQVSPYSN
Trigger: ATTGGAATATGGTGATACTTGTGACACATTCATGCATGTAAACAAGGCATTTTCCAGCTTCTGCCGTGTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR CAA 90 bp TCCCTAATGACTAAAGCTGACCGTCTGTTTGTTTGTATCCAACGGATAGCTTCTCATTGTCTTTCTAGGTaGGCGTTCATGATTCAAGTA +
Preference number: 3 (lower is better)
Translates to: SLMTKADRLFVCIQRIASHCLSR*AFMIQV
Trigger: TACTTGAATCATGAACGCCAACCTAGAAAGACAATG...AGAAGCTATCCGTTGGATACAAACAAACAGACGGTCAGCTTTAGTCATTAGGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR CAA 90 bp TTAAGGGTTTACATTGCAGGGGGAAATGTACCTCGAGGTATTATTTTGTGTGAGTGTGTAATACCCTGTTaGCATCAACAGCAACGTGAT +
Preference number: 3 (lower is better)
Translates to: LRVYIAGGNVPRGIILCECVIPC*HQQQRD
Trigger: ATCACGTTGCTGTTGATGCAAACAGGGTATTACACA...CTCACACAAAATAATACCTCGAGGTACATTTCCCCCTGCAATGTAAACCCTTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR CAA 90 bp GGATTTTTGCTGTACCTTCCTGTTACCTGTTTGTGTGCAAAGTTGGAAAGCTGCTTTAAGACAGGGTTTTaGTGTGTGTGTGTGTCTTTT +
Preference number: 3 (lower is better)
Translates to: GFLLYLPVTCLCAKLESCFKTGF*CVCVSF
Trigger: AAAAGACACACACACACACAAAAACCCTGTCTTAAA...GCAGCTTTCCAACTTTGCACACAAACAGGTAACAGGAAGGTACAGCAAAAATCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR CAA 90 bp TTAAGGGTTTACATTGCAGGGGGAAATGTACCTCGAGGTATTATTTTGTGTGAGCATTGTCTTTCTAGGTaGGCGTTCATGATTCAAGTA +
Preference number: 3 (lower is better)
Translates to: LRVYIAGGNVPRGIILCEHCLSR*AFMIQV
Trigger: TACTTGAATCATGAACGCCAACCTAGAAAGACAATG...CTCACACAAAATAATACCTCGAGGTACATTTCCCCCTGCAATGTAAACCCTTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR CAA 90 bp TTAAGGGTTTACATTGCAGGGGGAAATGTACCTCGAGGTATTATTTTGTGTGAGCCCAACTTGTTGATATaGGCTAGATATGGGTCAATT +
Preference number: 3 (lower is better)
Translates to: LRVYIAGGNVPRGIILCEPNLLI*ARYGSI
Trigger: AATTGACCCATATCTAGCCAATATCAACAAGTTGGG...CTCACACAAAATAATACCTCGAGGTACATTTCCCCCTGCAATGTAAACCCTTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR-3UTR CAA 90 bp TTAAGGGTTTACATTGCAGGGGGAAATGTACCTCGAGGTATTATTTTGTGTGAGTTACGATACTGTGTGTaGCAAATAATGCCTAGACCA +
Preference number: 3 (lower is better)
Translates to: LRVYIAGGNVPRGIILCELRYCV*QIMPRP
Trigger: TGGTCTAGGCATTATTTGCAACACACAGTATCGTAA...CTCACACAAAATAATACCTCGAGGTACATTTCCCCCTGCAATGTAAACCCTTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR TCA 72 bp CTTCCTTCAAAGGAAGTCGTCACTATACAAGATCAGTaGGATCCAACTGAAAAGGGCTTCTTGACTAGTAAA +
Preference number: 3 (lower is better)
Translates to: LPSKEVVTIQDQ*DPTEKGFLTSK
Trigger: TTTACTAGTCAAGAAGCCCTTTTCAGTTGGATCTCACTGATCTTGTATAGTGACGACTTCCTTTGAAGGAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR GCA 72 bp ATGCAGGCTTGTATATGTGAACACTCACTTGAGTCATaGCTGTCAATCTCTTTTGAGGCTAGGTTTATAATC +
Preference number: 3 (lower is better)
Translates to: MQACICEHSLES*LSISFEARFII
Trigger: GATTATAAACCTAGCCTCAAAAGAGATTGACAGGCATGACTCAAGTGAGTGTTCACATATACAAGCCTGCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR GCA 72 bp CGTTACAGTACTGTGAACGTCAACAAGAAGAATTGCTaGATGGAAAACACTGAATATAGGCAGAACAATCTC +
Preference number: 3 (lower is better)
Translates to: RYSTVNVNKKNC*MENTEYRQNNL
Trigger: GAGATTGTTCTGCCTATATTCAGTGTTTTCCATGCAGCAATTCTTCTTGTTGACGTTCACAGTACTGTAACG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR TCA 72 bp ACACGACACAGGAAGGAACTTGGCATTCTACATTACTaGGACATAAGCATATTAACTTGCTTGACGTTTGTT +
Preference number: 3 (lower is better)
Translates to: TRHRKELGILHY*DISILTCLTFV
Trigger: AACAAACGTCAAGCAAGTTAATATGCTTATGTCTCAGTAATGTAGAATGCCAAGTTCCTTCCTGTGTCGTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR CCA 72 bp ACTTCACAAATTATTTACGTTTGGAATTCTGACGACTaGCCTCTGATATATACAGGACAATCCAAGCTTTGG +
Preference number: 3 (lower is better)
Translates to: TSQIIYVWNSDD*PLIYTGQSKLW
Trigger: CCAAAGCTTGGATTGTCCTGTATATATCAGAGGCCAGTCGTCAGAATTCCAAACGTAAATAATTTGTGAAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446273.1
3UTR TCA 72 bp ATCATAAGGAAAGAGGGAACAAAGTTTCTCTGTTTTTaGGACATCGCATCATCAAAAGTTATCTTCCGTTCC +
Preference number: 3 (lower is better)
Translates to: IIRKEGTKFLCF*DIASSKVIFRS
Trigger: GGAACGGAAGATAACTTTTGATGATGCGATGTCTCAAAAACAGAGAAACTTTGTTCCCTCTTTCCTTATGAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR TCA 72 bp AGATTTCAGTTCAGTCTCAAATGGAAAGGAACAAAGTaGTGGCATTCTCATCTATATACACCAAACACTCTC +
Preference number: 3 (lower is better)
Translates to: RFQFSLKWKGTK*WHSHLYTPNTL
Trigger: GAGAGTGTTTGGTGTATATAGATGAGAATGCCATCACTTTGTTCCTTTCCATTTGAGACTGAACTGAAATCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR TCA 72 bp GCAGTAACACTAAGAAGTATAGTTAATGCATACACATaGAGTGTGACAAAACTTGGCAAAAACACTGCAGAG +
Preference number: 3 (lower is better)
Translates to: AVTLRSIVNAYT*SVTKLGKNTAE
Trigger: CTCTGCAGTGTTTTTGCCAAGTTTTGTCACACTTCATGTGTATGCATTAACTATACTTCTTAGTGTTACTGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR TCA 72 bp AAATTATTTACGTTTGGAATTCTGACGACTGGCCTCTaGTATATACAGGACAATCCAAGCTTTGGTGGAAAA +
Preference number: 3 (lower is better)
Translates to: KLFTFGILTTGL*YIQDNPSFGGK
Trigger: TTTTCCACCAAAGCTTGGATTGTCCTGTATATATCAGAGGCCAGTCGTCAGAATTCCAAACGTAAATAATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446273.1
3UTR TCA 72 bp ACTCACTACTTCACAAATTATTTACGTTTGGAATTCTaGCGACTGGCCTCTGATATATACAGGACAATCCAA +
Preference number: 3 (lower is better)
Translates to: THYFTNYLRLEF*RLASDIYRTIQ
Trigger: TTGGATTGTCCTGTATATATCAGAGGCCAGTCGTCAGAATTCCAAACGTAAATAATTTGTGAAGTAGTGAGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446273.1
3UTR TCA 72 bp GTGCCTAGTTTCTGTGTCCATGTAAAACCAGTAATATaGGGAGCAATTTCAACATATGGGAGTTTGATTAAA +
Preference number: 3 (lower is better)
Translates to: VPSFCVHVKPVI*GAISTYGSLIK
Trigger: TTTAATCAAACTCCCATATGTTGAAATTGCTCCTCATATTACTGGTTTTACATGGACACAGAAACTAGGCAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR CCA 72 bp TGTATTTTACTATGTAAACATAGCCCCCTAGGATTATaGAACCCAAAGCAGCATTTATATCTCCATCTAAAT +
Preference number: 3 (lower is better)
Translates to: CILLCKHSPLGL*NPKQHLYLHLN
Trigger: ATTTAGATGGAGATATAAATGCTGCTTTGGGTTCCATAATCCTAGGGGGCTATGTTTACATAGTAAAATACA
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp GATCTGGTCCCGGTGGCCACACGCATGCGGGCAGTGTGGGTGCTGAGCTGCTGGTGCCACCAGCGCTGCTaGTCCACTGCCCGAGCCCAG +
Preference number: 4 (lower is better)
Translates to: DLVPVATRMRAVWVLSCWCHQRC*STARAQ
Trigger: CTGGGCTCGGGCAGTGGAGCAGCAGCGCTGGTGGCA...CCAGCAGCTCAGCACCCACACTGCCCGCATGCGTGTGGCCACCGGGACCAGATC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp GATCTGGTCCCGGTGGCCACACGCATGCGGGCAGTGTGGGTGCTGAGCTGCTGGATGCCTGGCTGCCTCTaGTGCTGCTGCTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: DLVPVATRMRAVWVLSCWMPGCL*CCCCCC
Trigger: GCAGCAGCAGCAGCAGCAGCAGAGGCAGCCAGGCAT...CCAGCAGCTCAGCACCCACACTGCCCGCATGCGTGTGGCCACCGGGACCAGATC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp GTATGCCACAATCACTCGGGATCTGGTCCCGGTGGCCACACGCATGCGGGCAGTGATCGGCCCCGCTGCTaGCACCAGCGCTGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: VCHNHSGSGPGGHTHAGSDRPRC*HQRCCS
Trigger: GGAGCAGCAGCGCTGGTGGCAGCAGCGGGGCCGATC...ACTGCCCGCATGCGTGTGGCCACCGGGACCAGATCCCGAGTGATTGTGGCATAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp GATCTGGTCCCGGTGGCCACACGCATGCGGGCAGTGTGGGTGCTGAGCTGCTGGTGGGTCTGCGTCGCCTaGGTACCTTCCCCTGTCTCC +
Preference number: 4 (lower is better)
Translates to: DLVPVATRMRAVWVLSCWWVCVA*VPSPVS
Trigger: GGAGACAGGGGAAGGTACCCAGGCGACGCAGACCCA...CCAGCAGCTCAGCACCCACACTGCCCGCATGCGTGTGGCCACCGGGACCAGATC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp GATCTGGTCCCGGTGGCCACACGCATGCGGGCAGTGTGGGTGCTGAGCTGCTGGAGGTGTTGCAGGCTGTaGCCCGCTGCTCCAGCTGGA +
Preference number: 4 (lower is better)
Translates to: DLVPVATRMRAVWVLSCWRCCRL*PAAPAG
Trigger: TCCAGCTGGAGCAGCGGGCCACAGCCTGCAACACCT...CCAGCAGCTCAGCACCCACACTGCCCGCATGCGTGTGGCCACCGGGACCAGATC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp GATCTGGTCCCGGTGGCCACACGCATGCGGGCAGTGTGGGTGCTGAGCTGCTGGATCTCCCCAGCCCCCTaGGTTCTTGGTCTGTGTGGC +
Preference number: 4 (lower is better)
Translates to: DLVPVATRMRAVWVLSCWISPAP*VLGLCG
Trigger: GCCACACAGACCAAGAACTCAGGGGGCTGGGGAGAT...CCAGCAGCTCAGCACCCACACTGCCCGCATGCGTGTGGCCACCGGGACCAGATC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp GATCTGGTCCCGGTGGCCACACGCATGCGGGCAGTGTGGGTGCTGAGCTGCTGGTCAGTGATGGCCTGGTaGTGTAACGCGCCACGGCCT +
Preference number: 4 (lower is better)
Translates to: DLVPVATRMRAVWVLSCWSVMAW*CNAPRP
Trigger: AGGCCGTGGCGCGTTACAGCACCAGGCCATCACTGA...CCAGCAGCTCAGCACCCACACTGCCCGCATGCGTGTGGCCACCGGGACCAGATC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp GATCTGGTCCCGGTGGCCACACGCATGCGGGCAGTGTGGGTGCTGAGCTGCTGGAGGGTAAAAGCGTGCTaGCCGCTCTGCACACGGCAG +
Preference number: 4 (lower is better)
Translates to: DLVPVATRMRAVWVLSCWRVKAC*PLCTRQ
Trigger: CTGCCGTGTGCAGAGCGGGCAGCACGCTTTTACCCT...CCAGCAGCTCAGCACCCACACTGCCCGCATGCGTGTGGCCACCGGGACCAGATC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp GTATGCCACAATCACTCGGGATCTGGTCCCGGTGGCCACACGCATGCGGGCAGTTGTGGTGGCGGCGGCTaGTGTGGGGGCTGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: VCHNHSGSGPGGHTHAGSCGGGG*CGGCCC
Trigger: ACAGCAGCAGCCCCCACAGCAGCCGCCGCCACCACA...ACTGCCCGCATGCGTGTGGCCACCGGGACCAGATCCCGAGTGATTGTGGCATAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp GATCTGGTCCCGGTGGCCACACGCATGCGGGCAGTGTGGGTGCTGAGCTGCTGGTGGAAGGTCGAACGTTaGCTGGAGGTGGTGGGGGTG +
Preference number: 4 (lower is better)
Translates to: DLVPVATRMRAVWVLSCWWKVER*LEVVGV
Trigger: CACCCCCACCACCTCCAGGCAACGTTCGACCTTCCA...CCAGCAGCTCAGCACCCACACTGCCCGCATGCGTGTGGCCACCGGGACCAGATC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp GTATGCCACAATCACTCGGGATCTGGTCCCGGTGGCCACACGCATGCGGGCAGTGTAGCGGGCGGCGCTTaGCGGTTGTCCGTTCGGCAC +
Preference number: 4 (lower is better)
Translates to: VCHNHSGSGPGGHTHAGSVAGGA*RLSVRH
Trigger: GTGCCGAACGGACAACCGCCAAGCGCCGCCCGCTAC...ACTGCCCGCATGCGTGTGGCCACCGGGACCAGATCCCGAGTGATTGTGGCATAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp GATCTGGTCCCGGTGGCCACACGCATGCGGGCAGTGTGGGTGCTGAGCTGCTGGACTTTGTGGTCCTGCTaGCAACGGAATCGCGGCGGC +
Preference number: 4 (lower is better)
Translates to: DLVPVATRMRAVWVLSCWTLWSC*QRNRGG
Trigger: GCCGCCGCGATTCCGTTGCCAGCAGGACCACAAAGT...CCAGCAGCTCAGCACCCACACTGCCCGCATGCGTGTGGCCACCGGGACCAGATC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp GATCTGGTCCCGGTGGCCACACGCATGCGGGCAGTGTGGGTGCTGAGCTGCTGGACAGAGAGCGGTCAGTaGGGGCTGCTGGAAGCAGAG +
Preference number: 4 (lower is better)
Translates to: DLVPVATRMRAVWVLSCWTESGQ*GLLEAE
Trigger: CTCTGCTTCCAGCAGCCCCCACTGACCGCTCTCTGT...CCAGCAGCTCAGCACCCACACTGCCCGCATGCGTGTGGCCACCGGGACCAGATC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp GATCTGGTCCCGGTGGCCACACGCATGCGGGCAGTGTGGGTGCTGAGCTGCTGGCAATCACTCGGGATCTaGTCCCGGTGGCCACACGCA +
Preference number: 4 (lower is better)
Translates to: DLVPVATRMRAVWVLSCWQSLGI*SRWPHA
Trigger: TGCGTGTGGCCACCGGGACCAGATCCCGAGTGATTG...CCAGCAGCTCAGCACCCACACTGCCCGCATGCGTGTGGCCACCGGGACCAGATC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp ATGCGGGCAGTGTGGGTGCTGAGCTGCTGGAGGAGTAGCTCTCCACTCCCTGACGGGAGGTGCCGTTGTTaGAGGAGGCTCCCGAGCCCC +
Preference number: 4 (lower is better)
Translates to: MRAVWVLSCWRSSSPLPDGRCRC*RRLPSP
Trigger: GGGGCTCGGGAGCCTCCTCCAACAACGGCACCTCCC...GTCAGGGAGTGGAGAGCTACTCCTCCAGCAGCTCAGCACCCACACTGCCCGCAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp GTATGCCACAATCACTCGGGATCTGGTCCCGGTGGCCACACGCATGCGGGCAGTGTTGCCTGGAGGTGGTaGGGGTGGGCCTCCCCACGA +
Preference number: 4 (lower is better)
Translates to: VCHNHSGSGPGGHTHAGSVAWRW*GWASPR
Trigger: TCGTGGGGAGGCCCACCCCCACCACCTCCAGGCAAC...ACTGCCCGCATGCGTGTGGCCACCGGGACCAGATCCCGAGTGATTGTGGCATAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp GTATGCCACAATCACTCGGGATCTGGTCCCGGTGGCCACACGCATGCGGGCAGTGGGCCAGGCACCAGGTaGAGGCAGCGAGGTGTTGAG +
Preference number: 4 (lower is better)
Translates to: VCHNHSGSGPGGHTHAGSGPGTR*RQRGVE
Trigger: CTCAACACCTCGCTGCCTTCACCTGGTGCCTGGCCC...ACTGCCCGCATGCGTGTGGCCACCGGGACCAGATCCCGAGTGATTGTGGCATAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp ATGCGGGCAGTGTGGGTGCTGAGCTGCTGGAGGAGTAGCTCTCCACTCCCTGACTGGGGGCCCCCACAATaGAGCGCCAGCAAGATCGGC +
Preference number: 4 (lower is better)
Translates to: MRAVWVLSCWRSSSPLPDWGPPQ*SASKIG
Trigger: GCCGATCTTGCTGGCGCTTCATTGTGGGGGCCCCCA...GTCAGGGAGTGGAGAGCTACTCCTCCAGCAGCTCAGCACCCACACTGCCCGCAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp GTATGCCACAATCACTCGGGATCTGGTCCCGGTGGCCACACGCATGCGGGCAGTCACCCCCAAGGAGCATaGAGGACGGTGGAGGGGGCT +
Preference number: 4 (lower is better)
Translates to: VCHNHSGSGPGGHTHAGSHPQGA*RTVEGA
Trigger: AGCCCCCTCCACCGTCCTGCATGCTCCTTGGGGGTG...ACTGCCCGCATGCGTGTGGCCACCGGGACCAGATCCCGAGTGATTGTGGCATAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp ATGCGGGCAGTGTGGGTGCTGAGCTGCTGGAGGAGTAGCTCTCCACTCCCTGACCACCCCCAAGGAGCATaGAGGACGGTGGAGGGGGCT +
Preference number: 4 (lower is better)
Translates to: MRAVWVLSCWRSSSPLPDHPQGA*RTVEGA
Trigger: AGCCCCCTCCACCGTCCTGCATGCTCCTTGGGGGTG...GTCAGGGAGTGGAGAGCTACTCCTCCAGCAGCTCAGCACCCACACTGCCCGCAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp ATGCGGGCAGTGTGGGTGCTGAGCTGCTGGAGGAGTAGCTCTCCACTCCCTGACTTGCTCCAGGTGCTGTaGAGGGAGGAGGCCCTGCCC +
Preference number: 4 (lower is better)
Translates to: MRAVWVLSCWRSSSPLPDLLQVL*REEALP
Trigger: GGGCAGGGCCTCCTCCCTGCACAGCACCTGGAGCAA...GTCAGGGAGTGGAGAGCTACTCCTCCAGCAGCTCAGCACCCACACTGCCCGCAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp GATCTGGTCCCGGTGGCCACACGCATGCGGGCAGTGTGGGTGCTGAGCTGCTGGGGCTGCACGGGTGTGTaGAGACCTCTCGATTGTGCT +
Preference number: 4 (lower is better)
Translates to: DLVPVATRMRAVWVLSCWGCTGV*RPLDCA
Trigger: AGCACAATCGAGAGGTCTGCACACACCCGTGCAGCC...CCAGCAGCTCAGCACCCACACTGCCCGCATGCGTGTGGCCACCGGGACCAGATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp GATCTGGTCCCGGTGGCCACACGCATGCGGGCAGTGTGGGTGCTGAGCTGCTGGCTGCTGCTGCTGCAGTaGACTCACCATTCGAGCCAG +
Preference number: 4 (lower is better)
Translates to: DLVPVATRMRAVWVLSCWLLLLQ*THHSSQ
Trigger: CTGGCTCGAATGGTGAGTGCACTGCAGCAGCAGCAG...CCAGCAGCTCAGCACCCACACTGCCCGCATGCGTGTGGCCACCGGGACCAGATC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp GATCTGGTCCCGGTGGCCACACGCATGCGGGCAGTGTGGGTGCTGAGCTGCTGGAGGGGGCTGAGCTTGTaGCAGAAAGCGGCTGACTTC +
Preference number: 4 (lower is better)
Translates to: DLVPVATRMRAVWVLSCWRGLSL*QKAADF
Trigger: GAAGTCAGCCGCTTTCTGGCACAAGCTCAGCCCCCT...CCAGCAGCTCAGCACCCACACTGCCCGCATGCGTGTGGCCACCGGGACCAGATC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp GATCTGGTCCCGGTGGCCACACGCATGCGGGCAGTGTGGGTGCTGAGCTGCTGGGGGCCCAGCCTGCCATaGAAGTGCACCTCTAAAGTG +
Preference number: 4 (lower is better)
Translates to: DLVPVATRMRAVWVLSCWGPSLP*KCTSKV
Trigger: CACTTTAGAGGTGCACTTGCATGGCAGGCTGGGCCC...CCAGCAGCTCAGCACCCACACTGCCCGCATGCGTGTGGCCACCGGGACCAGATC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp GATCTGGTCCCGGTGGCCACACGCATGCGGGCAGTGTGGGTGCTGAGCTGCTGGAAAGGGGGCCCAGCCTaGCATGCAAGTGCACCTCTA +
Preference number: 4 (lower is better)
Translates to: DLVPVATRMRAVWVLSCWKGGPA*HASAPL
Trigger: TAGAGGTGCACTTGCATGGCAGGCTGGGCCCCCTTT...CCAGCAGCTCAGCACCCACACTGCCCGCATGCGTGTGGCCACCGGGACCAGATC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp ATGCGGGCAGTGTGGGTGCTGAGCTGCTGGAGGAGTAGCTCTCCACTCCCTGACGGTCAGACCAGGAGGTaGGCGGGGCAGCGGTGTAGT +
Preference number: 4 (lower is better)
Translates to: MRAVWVLSCWRSSSPLPDGQTRR*AGQRCS
Trigger: ACTACACCGCTGCCCCGCCCACCTCCTGGTCTGACC...GTCAGGGAGTGGAGAGCTACTCCTCCAGCAGCTCAGCACCCACACTGCCCGCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp GTATGCCACAATCACTCGGGATCTGGTCCCGGTGGCCACACGCATGCGGGCAGTGGACAGGGTCGCCACTaGCTCGCAGGAGCCTTGGGA +
Preference number: 4 (lower is better)
Translates to: VCHNHSGSGPGGHTHAGSGQGRH*LAGALG
Trigger: TCCCAAGGCTCCTGCGAGCCAGTGGCGACCCTGTCC...ACTGCCCGCATGCGTGTGGCCACCGGGACCAGATCCCGAGTGATTGTGGCATAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp CAAAGGGTAAAAGCGTGCTGCCCGCTCTGCACACGGCAGAAGCTGGAAAATGCCCGCGGCGTTTCGCTGTaGGGCGAGGCGCGCAGTCTC +
Preference number: 4 (lower is better)
Translates to: QRVKACCPLCTRQKLENARGVSL*GEARSL
Trigger: GAGACTGCGCGCCTCGCCTCACAGCGAAACGCCGCG...GGCATTTTCCAGCTTCTGCCGTGTGCAGAGCGGGCAGCACGCTTTTACCCTTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301923.13
CDS-3UTR TCA 90 bp GATCTGGTCCCGGTGGCCACACGCATGCGGGCAGTGTGGGTGCTGAGCTGCTGGAAACTGGTTGTACGGTaGCCCTCCCCGGGTTTTACC +
Preference number: 4 (lower is better)
Translates to: DLVPVATRMRAVWVLSCWKLVVR*PSPGFT
Trigger: GGTAAAACCCGGGGAGGGTCACCGTACAACCAGTTT...CCAGCAGCTCAGCACCCACACTGCCCGCATGCGTGTGGCCACCGGGACCAGATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp GATCTGGTCCCGGTGGCCACACGCATGCGGGCAGTGTGGGTGCTGAGCTGCTGGGTGCACGTGTCTCTGTaGGCACATTCACGGTGCATG +
Preference number: 4 (lower is better)
Translates to: DLVPVATRMRAVWVLSCWVHVSL*AHSRCM
Trigger: CATGCACCGTGAATGTGCTCACAGAGACACGTGCAC...CCAGCAGCTCAGCACCCACACTGCCCGCATGCGTGTGGCCACCGGGACCAGATC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp GATCTGGTCCCGGTGGCCACACGCATGCGGGCAGTGTGGGTGCTGAGCTGCTGGAACACTTTGTGGTCCTaGTGGCAACGGAATCGCGGC +
Preference number: 4 (lower is better)
Translates to: DLVPVATRMRAVWVLSCWNTLWS*WQRNRG
Trigger: GCCGCGATTCCGTTGCCAGCAGGACCACAAAGTGTT...CCAGCAGCTCAGCACCCACACTGCCCGCATGCGTGTGGCCACCGGGACCAGATC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp GTATGCCACAATCACTCGGGATCTGGTCCCGGTGGCCACACGCATGCGGGCAGTTGGGTTTGCTCCAGGTaGTGTGCAGGGAGGAGGCCC +
Preference number: 4 (lower is better)
Translates to: VCHNHSGSGPGGHTHAGSWVCSR*CAGRRP
Trigger: GGGCCTCCTCCCTGCACAGCACCTGGAGCAAACCCA...ACTGCCCGCATGCGTGTGGCCACCGGGACCAGATCCCGAGTGATTGTGGCATAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp ATGCGGGCAGTGTGGGTGCTGAGCTGCTGGAGGAGTAGCTCTCCACTCCCTGACTGGCGCACTTGGGGTTaGTGCAGGTGTAGGGGGCTG +
Preference number: 4 (lower is better)
Translates to: MRAVWVLSCWRSSSPLPDWRTWG*CRCRGL
Trigger: CAGCCCCCTACACCTGCAGCAACCCCAAGTGCGCCA...GTCAGGGAGTGGAGAGCTACTCCTCCAGCAGCTCAGCACCCACACTGCCCGCAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp AACTGCAGGCCCCCTGGAATTTACCTGGCCATCAGACCTGCCAGCAACAGTGGCCAAGATCGGCCCCGCTaGTGCCACCAGCGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: NCRPPGIYLAIRPASNSGQDRPR*CHQRCC
Trigger: GCAGCAGCGCTGGTGGCAGCAGCGGGGCCGATCTTG...GCCACTGTTGCTGGCAGGTCTGATGGCCAGGTAAATTCCAGGGGGCCTGCAGTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp GATCTGGTCCCGGTGGCCACACGCATGCGGGCAGTGTGGGTGCTGAGCTGCTGGCATGTGCGTCCCCCTTaGTCAGGATGTCTGGGTGTA +
Preference number: 4 (lower is better)
Translates to: DLVPVATRMRAVWVLSCWHVRPP*SGCLGV
Trigger: TACACCCAGACATCCTGAGCAAGGGGGACGCACATG...CCAGCAGCTCAGCACCCACACTGCCCGCATGCGTGTGGCCACCGGGACCAGATC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp GATCTGGTCCCGGTGGCCACACGCATGCGGGCAGTGTGGGTGCTGAGCTGCTGGTTCGTTCCCAGAACTTaGAGACTGGCACTGGCTCCC +
Preference number: 4 (lower is better)
Translates to: DLVPVATRMRAVWVLSCWFVPRT*RLALAP
Trigger: GGGAGCCAGTGCCAGTCTGCAAGTTCTGGGAACGAA...CCAGCAGCTCAGCACCCACACTGCCCGCATGCGTGTGGCCACCGGGACCAGATC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp ATGCGGGCAGTGTGGGTGCTGAGCTGCTGGAGGAGTAGCTCTCCACTCCCTGACCGCAGCTGGCGCACTTaGGGTTGCTGCAGGTGTAGG +
Preference number: 4 (lower is better)
Translates to: MRAVWVLSCWRSSSPLPDRSWRT*GCCRCR
Trigger: CCTACACCTGCAGCAACCCCAAGTGCGCCAGCTGCG...GTCAGGGAGTGGAGAGCTACTCCTCCAGCAGCTCAGCACCCACACTGCCCGCAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp AACTGCAGGCCCCCTGGAATTTACCTGGCCATCAGACCTGCCAGCAACAGTGGCGGGATCTGGTCCCGGTaGCCACACGCATGCGGGCAG +
Preference number: 4 (lower is better)
Translates to: NCRPPGIYLAIRPASNSGGIWSR*PHACGQ
Trigger: CTGCCCGCATGCGTGTGGCCACCGGGACCAGATCCC...GCCACTGTTGCTGGCAGGTCTGATGGCCAGGTAAATTCCAGGGGGCCTGCAGTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp GATCTGGTCCCGGTGGCCACACGCATGCGGGCAGTGTGGGTGCTGAGCTGCTGGACCTGCCAGCAACAGTaGCAAGAGGACTCAGAGGTC +
Preference number: 4 (lower is better)
Translates to: DLVPVATRMRAVWVLSCWTCQQQ*QEDSEV
Trigger: GACCTCTGAGTCCTCTTGCCACTGTTGCTGGCAGGT...CCAGCAGCTCAGCACCCACACTGCCCGCATGCGTGTGGCCACCGGGACCAGATC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp AACTGCAGGCCCCCTGGAATTTACCTGGCCATCAGACCTGCCAGCAACAGTGGCGGGAGGTGCCGTTGTTaGAGGAGGCTCCCGAGCCCC +
Preference number: 4 (lower is better)
Translates to: NCRPPGIYLAIRPASNSGGRCRC*RRLPSP
Trigger: GGGGCTCGGGAGCCTCCTCCAACAACGGCACCTCCC...GCCACTGTTGCTGGCAGGTCTGATGGCCAGGTAAATTCCAGGGGGCCTGCAGTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp GTATGCCACAATCACTCGGGATCTGGTCCCGGTGGCCACACGCATGCGGGCAGTCGAACCAGAAGCCTCTaGTTGTGGTGGCGGCGGCTG +
Preference number: 4 (lower is better)
Translates to: VCHNHSGSGPGGHTHAGSRTRSL*LWWRRL
Trigger: CAGCCGCCGCCACCACAACCAGAGGCTTCTGGTTCG...ACTGCCCGCATGCGTGTGGCCACCGGGACCAGATCCCGAGTGATTGTGGCATAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp GATCTGGTCCCGGTGGCCACACGCATGCGGGCAGTGTGGGTGCTGAGCTGCTGGTGGTTCTCGAGGTGCTaGGCCCCCTTGGGAATTCTT +
Preference number: 4 (lower is better)
Translates to: DLVPVATRMRAVWVLSCWWFSRC*APLGIL
Trigger: AAGAATTCCCAAGGGGGCCCAGCACCTCGAGAACCA...CCAGCAGCTCAGCACCCACACTGCCCGCATGCGTGTGGCCACCGGGACCAGATC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp GATCTGGTCCCGGTGGCCACACGCATGCGGGCAGTGTGGGTGCTGAGCTGCTGGGAGACAGCTTGTAGCTaGGAGAAGGGGAGAAGGGAG +
Preference number: 4 (lower is better)
Translates to: DLVPVATRMRAVWVLSCWETACS*EKGRRE
Trigger: CTCCCTTCTCCCCTTCTCCCAGCTACAAGCTGTCTC...CCAGCAGCTCAGCACCCACACTGCCCGCATGCGTGTGGCCACCGGGACCAGATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454349.7
CDS-3UTR TCA 90 bp GATCTGGTCCCGGTGGCCACACGCATGCGGGCAGTGTGGGTGCTGAGCTGCTGGGTGCCAGAAAGCGGCTaGCTTCATCATCAGTGGCAA +
Preference number: 4 (lower is better)
Translates to: DLVPVATRMRAVWVLSCWVPESG*LHHQWQ
Trigger: TTGCCACTGATGATGAAGTCAGCCGCTTTCTGGCAC...CCAGCAGCTCAGCACCCACACTGCCCGCATGCGTGTGGCCACCGGGACCAGATC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp AACTGCAGGCCCCCTGGAATTTACCTGGCCATCAGACCTGCCAGCAACAGTGGCTGGGGGCCCCCACAATaGAGCGCCAGCAAGATCGGC +
Preference number: 4 (lower is better)
Translates to: NCRPPGIYLAIRPASNSGWGPPQ*SASKIG
Trigger: GCCGATCTTGCTGGCGCTTCATTGTGGGGGCCCCCA...GCCACTGTTGCTGGCAGGTCTGATGGCCAGGTAAATTCCAGGGGGCCTGCAGTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp GATCTGGTCCCGGTGGCCACACGCATGCGGGCAGTGTGGGTGCTGAGCTGCTGGGTGTCCTGCTTAATTTaGGTTTGGCCCCAGCCAGTG +
Preference number: 4 (lower is better)
Translates to: DLVPVATRMRAVWVLSCWVSCLI*VWPQPV
Trigger: CACTGGCTGGGGCCAAACTCAAATTAAGCAGGACAC...CCAGCAGCTCAGCACCCACACTGCCCGCATGCGTGTGGCCACCGGGACCAGATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp ATGCGGGCAGTGTGGGTGCTGAGCTGCTGGAGGAGTAGCTCTCCACTCCCTGACCGCCCCACCCAGGACTaGTTTCATTTGGCTCACCCC +
Preference number: 4 (lower is better)
Translates to: MRAVWVLSCWRSSSPLPDRPTQD*FHLAHP
Trigger: GGGGTGAGCCAAATGAAAGCAGTCCTGGGTGGGGCG...GTCAGGGAGTGGAGAGCTACTCCTCCAGCAGCTCAGCACCCACACTGCCCGCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301923.13
ENST00000454349.7
CDS-3UTR GCA 90 bp GTATGCCACAATCACTCGGGATCTGGTCCCGGTGGCCACACGCATGCGGGCAGTAGGGCGAGTGCTTCATaGCTGGCTGCCTCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: VCHNHSGSGPGGHTHAGSRASAS*LAASAA
Trigger: AGCAGCAGAGGCAGCCAGGCATGAAGCACTCGCCCT...ACTGCCCGCATGCGTGTGGCCACCGGGACCAGATCCCGAGTGATTGTGGCATAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp GATCTGGTCCCGGTGGCCACACGCATGCGGGCAGTGTGGGTGCTGAGCTGCTGGAGCAGTGGGCCATGCTaGATGCAGATCGTTCTCAAG +
Preference number: 4 (lower is better)
Translates to: DLVPVATRMRAVWVLSCWSSGPC*MQIVLK
Trigger: CTTGAGAACGATCTGCATGCAGCATGGCCCACTGCT...CCAGCAGCTCAGCACCCACACTGCCCGCATGCGTGTGGCCACCGGGACCAGATC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp CAAAGGGTAAAAGCGTGCTGCCCGCTCTGCACACGGCAGAAGCTGGAAAATGCCTGCTGCCACCAGCGCTaGTGCTCCACTGCCCGAGCC +
Preference number: 4 (lower is better)
Translates to: QRVKACCPLCTRQKLENACCHQR*CSTARA
Trigger: GGCTCGGGCAGTGGAGCAGCAGCGCTGGTGGCAGCA...GGCATTTTCCAGCTTCTGCCGTGTGCAGAGCGGGCAGCACGCTTTTACCCTTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp GATCTGGTCCCGGTGGCCACACGCATGCGGGCAGTGTGGGTGCTGAGCTGCTGGAGGACAGTAGAGGTCTaGTCCCACCAAGGGTTGGAA +
Preference number: 4 (lower is better)
Translates to: DLVPVATRMRAVWVLSCWRTVEV*SHQGLE
Trigger: TTCCAACCCTTGGTGGGAGCAGACCTCTACTGTCCT...CCAGCAGCTCAGCACCCACACTGCCCGCATGCGTGTGGCCACCGGGACCAGATC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp GTATGCCACAATCACTCGGGATCTGGTCCCGGTGGCCACACGCATGCGGGCAGTATGCCTGTGCAGCCCTaGACAGGCACGAGGAGACTG +
Preference number: 4 (lower is better)
Translates to: VCHNHSGSGPGGHTHAGSMPVQP*TGTRRL
Trigger: CAGTCTCCTCGTGCCTGTGCAGGGCTGCACAGGCAT...ACTGCCCGCATGCGTGTGGCCACCGGGACCAGATCCCGAGTGATTGTGGCATAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp ATGCGGGCAGTGTGGGTGCTGAGCTGCTGGAGGAGTAGCTCTCCACTCCCTGACTGGAAGGTCGAACGTTaGCTGGAGGTGGTGGGGGTG +
Preference number: 4 (lower is better)
Translates to: MRAVWVLSCWRSSSPLPDWKVER*LEVVGV
Trigger: CACCCCCACCACCTCCAGGCAACGTTCGACCTTCCA...GTCAGGGAGTGGAGAGCTACTCCTCCAGCAGCTCAGCACCCACACTGCCCGCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp ATGCGGGCAGTGTGGGTGCTGAGCTGCTGGAGGAGTAGCTCTCCACTCCCTGACCAGGCTGTGGCCCGCTaGTCCAGCTGGAATTGGAAG +
Preference number: 4 (lower is better)
Translates to: MRAVWVLSCWRSSSPLPDQAVAR*SSWNWK
Trigger: CTTCCAATTCCAGCTGGAGCAGCGGGCCACAGCCTG...GTCAGGGAGTGGAGAGCTACTCCTCCAGCAGCTCAGCACCCACACTGCCCGCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp GATCTGGTCCCGGTGGCCACACGCATGCGGGCAGTGTGGGTGCTGAGCTGCTGGCTGGCGGCCGTTGGTTaGCTTAAACTTGGTTTCGTC +
Preference number: 4 (lower is better)
Translates to: DLVPVATRMRAVWVLSCWLAAVG*LKLGFV
Trigger: GACGAAACCAAGTTTAAGCCAACCAACGGCCGCCAG...CCAGCAGCTCAGCACCCACACTGCCCGCATGCGTGTGGCCACCGGGACCAGATC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp ATGCGGGCAGTGTGGGTGCTGAGCTGCTGGAGGAGTAGCTCTCCACTCCCTGACTCTTCCCAGCTGGGATaGCGAGCTCCTGTGACTGGC +
Preference number: 4 (lower is better)
Translates to: MRAVWVLSCWRSSSPLPDSSQLG*RAPVTG
Trigger: GCCAGTCACAGGAGCTCGCCATCCCAGCTGGGAAGA...GTCAGGGAGTGGAGAGCTACTCCTCCAGCAGCTCAGCACCCACACTGCCCGCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp ATGCGGGCAGTGTGGGTGCTGAGCTGCTGGAGGAGTAGCTCTCCACTCCCTGACCGAGTGCTTCATGCCTaGCTGCCTCTGCTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: MRAVWVLSCWRSSSPLPDRVLHA*LPLLLL
Trigger: CAGCAGCAGCAGAGGCAGCCAGGCATGAAGCACTCG...GTCAGGGAGTGGAGAGCTACTCCTCCAGCAGCTCAGCACCCACACTGCCCGCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp GATCTGGTCCCGGTGGCCACACGCATGCGGGCAGTGTGGGTGCTGAGCTGCTGGAGGGAGATGATGGTTTaGGGTTGGTCAGACCAGGAG +
Preference number: 4 (lower is better)
Translates to: DLVPVATRMRAVWVLSCWREMMV*GWSDQE
Trigger: CTCCTGGTCTGACCAACCCCAAACCATCATCTCCCT...CCAGCAGCTCAGCACCCACACTGCCCGCATGCGTGTGGCCACCGGGACCAGATC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp GATCTGGTCCCGGTGGCCACACGCATGCGGGCAGTGTGGGTGCTGAGCTGCTGGAAACACGTCCAGGGTTaGGGACTGAGGGATCAGAGA +
Preference number: 4 (lower is better)
Translates to: DLVPVATRMRAVWVLSCWKHVQG*GLRDQR
Trigger: TCTCTGATCCCTCAGTCCCCAACCCTGGACGTGTTT...CCAGCAGCTCAGCACCCACACTGCCCGCATGCGTGTGGCCACCGGGACCAGATC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp GATCTGGTCCCGGTGGCCACACGCATGCGGGCAGTGTGGGTGCTGAGCTGCTGGGAACACTGGAGCCTGTaGAGTTCCATTGCTGCACTG +
Preference number: 4 (lower is better)
Translates to: DLVPVATRMRAVWVLSCWEHWSL*SSIAAL
Trigger: CAGTGCAGCAATGGAACTCCACAGGCTCCAGTGTTC...CCAGCAGCTCAGCACCCACACTGCCCGCATGCGTGTGGCCACCGGGACCAGATC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp CCGGCACCTCCACACTCTCCACACTCGAGACTTGCAGATGCACGTGTGACGGTGCGAACCAGAAGCCTCTaGTTGTGGTGGCGGCGGCTG +
Preference number: 4 (lower is better)
Translates to: PAPPHSPHSRLADARVTVRTRSL*LWWRRL
Trigger: CAGCCGCCGCCACCACAACCAGAGGCTTCTGGTTCG...CACCGTCACACGTGCATCTGCAAGTCTCGAGTGTGGAGAGTGTGGAGGTGCCGG
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR CCA 90 bp AACTGCAGGCCCCCTGGAATTTACCTGGCCATCAGACCTGCCAGCAACAGTGGCTGGAGGTGGTGGGGGTaGGCCTCCCCACGAACCAGA +
Preference number: 4 (lower is better)
Translates to: NCRPPGIYLAIRPASNSGWRWWG*ASPRTR
Trigger: TCTGGTTCGTGGGGAGGCCCACCCCCACCACCTCCA...GCCACTGTTGCTGGCAGGTCTGATGGCCAGGTAAATTCCAGGGGGCCTGCAGTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp GCACCTCCACACTCTCCACACTCGAGACTTGCAGATGCACGTGTGACGGTGCCATGGAGGTGGTGGGGGTaGGCCTCCCCACGAACCAGA +
Preference number: 4 (lower is better)
Translates to: APPHSPHSRLADARVTVPWRWWG*ASPRTR
Trigger: TCTGGTTCGTGGGGAGGCCCACCCCCACCACCTCCA...TGGCACCGTCACACGTGCATCTGCAAGTCTCGAGTGTGGAGAGTGTGGAGGTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR CCA 90 bp GATCTGGTCCCGGTGGCCACACGCATGCGGGCAGTGTGGGTGCTGAGCTGCTGGTACTGGTCATTGGGGTaGGCAGGTTTGGTTCTCGAG +
Preference number: 4 (lower is better)
Translates to: DLVPVATRMRAVWVLSCWYWSLG*AGLVLE
Trigger: CTCGAGAACCAAACCTGCCCACCCCAATGACCAGTA...CCAGCAGCTCAGCACCCACACTGCCCGCATGCGTGTGGCCACCGGGACCAGATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp GTATGCCACAATCACTCGGGATCTGGTCCCGGTGGCCACACGCATGCGGGCAGTTTGGGCCCAACAGGATaGGAGGGCGAGTGCTTCATG +
Preference number: 4 (lower is better)
Translates to: VCHNHSGSGPGGHTHAGSLGPTG*EGECFM
Trigger: CATGAAGCACTCGCCCTCTCATCCTGTTGGGCCCAA...ACTGCCCGCATGCGTGTGGCCACCGGGACCAGATCCCGAGTGATTGTGGCATAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp ATGCGGGCAGTGTGGGTGCTGAGCTGCTGGAGGAGTAGCTCTCCACTCCCTGACCCATGCCGCCAGAGCTaGAGCCAGAACCATATCCAG +
Preference number: 4 (lower is better)
Translates to: MRAVWVLSCWRSSSPLPDPCRQS*SQNHIQ
Trigger: CTGGATATGGTTCTGGCTTCAGCTCTGGCGGCATGG...GTCAGGGAGTGGAGAGCTACTCCTCCAGCAGCTCAGCACCCACACTGCCCGCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp CCTCCACACTCTCCACACTCGAGACTTGCAGATGCACGTGTGACGGTGCCATTCGGGCCAGGCACCAGGTaGAGGCAGCGAGGTGTTGAG +
Preference number: 4 (lower is better)
Translates to: PPHSPHSRLADARVTVPFGPGTR*RQRGVE
Trigger: CTCAACACCTCGCTGCCTTCACCTGGTGCCTGGCCC...GAATGGCACCGTCACACGTGCATCTGCAAGTCTCGAGTGTGGAGAGTGTGGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR TCA 90 bp AACTGCAGGCCCCCTGGAATTTACCTGGCCATCAGACCTGCCAGCAACAGTGGCAGGTCCCACGGGATCTaGCTGGTTCTGGCCGGTCTC +
Preference number: 4 (lower is better)
Translates to: NCRPPGIYLAIRPASNSGRSHGI*LVLAGL
Trigger: GAGACCGGCCAGAACCAGTCAGATCCCGTGGGACCT...GCCACTGTTGCTGGCAGGTCTGATGGCCAGGTAAATTCCAGGGGGCCTGCAGTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp GATCTGGTCCCGGTGGCCACACGCATGCGGGCAGTGTGGGTGCTGAGCTGCTGGGCAATGCAGGCGCTATaGTTCATCACAGGCAAGATC +
Preference number: 4 (lower is better)
Translates to: DLVPVATRMRAVWVLSCWAMQAL*FITGKI
Trigger: GATCTTGCCTGTGATGAATCATAGCGCCTGCATTGC...CCAGCAGCTCAGCACCCACACTGCCCGCATGCGTGTGGCCACCGGGACCAGATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp GATCTGGTCCCGGTGGCCACACGCATGCGGGCAGTGTGGGTGCTGAGCTGCTGGGGCACGAGGAGACTGTaGTCAAGTCTGTTACTCGTT +
Preference number: 4 (lower is better)
Translates to: DLVPVATRMRAVWVLSCWGTRRL*SSLLLV
Trigger: AACGAGTAACAGACTTGATCACAGTCTCCTCGTGCC...CCAGCAGCTCAGCACCCACACTGCCCGCATGCGTGTGGCCACCGGGACCAGATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp CCCCTGTCTCCTCTCCCAAGTCCCAGAATCTCTTCCACTCAACTCTACACTGTGCCGGTCTCCAGCGACTaGCACCCCGCAGCTGGCGCA +
Preference number: 4 (lower is better)
Translates to: PLSPLPSPRISSTQLYTVPVSSD*HPAAGA
Trigger: TGCGCCAGCTGCGGGGTGGCAGTCGCTGGAGACCGG...CACAGTGTAGAGTTGAGTGGAAGAGATTCTGGGACTTGGGAGAGGAGACAGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp CACACACATGTGCGTCCCCCTTGCTCAGGATGTCTGGGTGTATGTACGAAGGCATGCTGCCACCAGCGCTaGTGCTCCACTGCCCGAGCC +
Preference number: 4 (lower is better)
Translates to: HTHVRPPCSGCLGVCTKACCHQR*CSTARA
Trigger: GGCTCGGGCAGTGGAGCAGCAGCGCTGGTGGCAGCA...TGCCTTCGTACATACACCCAGACATCCTGAGCAAGGGGGACGCACATGTGTGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp CCCCTGTCTCCTCTCCCAAGTCCCAGAATCTCTTCCACTCAACTCTACACTGTGGATCGGCCCCGCTGCTaGCACCAGCGCTGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: PLSPLPSPRISSTQLYTVDRPRC*HQRCCS
Trigger: GGAGCAGCAGCGCTGGTGGCAGCAGCGGGGCCGATC...CACAGTGTAGAGTTGAGTGGAAGAGATTCTGGGACTTGGGAGAGGAGACAGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp GTATGCCACAATCACTCGGGATCTGGTCCCGGTGGCCACACGCATGCGGGCAGTGTGTGGGTGCTGAGCTaGTGGAGGAGTAGCTCTCCA +
Preference number: 4 (lower is better)
Translates to: VCHNHSGSGPGGHTHAGSVWVLS*WRSSSP
Trigger: TGGAGAGCTACTCCTCCAGCAGCTCAGCACCCACAC...ACTGCCCGCATGCGTGTGGCCACCGGGACCAGATCCCGAGTGATTGTGGCATAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp GTATGCCACAATCACTCGGGATCTGGTCCCGGTGGCCACACGCATGCGGGCAGTCAAAGGGTAAAAGCGTaGTGCCCGCTCTGCACACGG +
Preference number: 4 (lower is better)
Translates to: VCHNHSGSGPGGHTHAGSQRVKA*CPLCTR
Trigger: CCGTGTGCAGAGCGGGCAGCACGCTTTTACCCTTTG...ACTGCCCGCATGCGTGTGGCCACCGGGACCAGATCCCGAGTGATTGTGGCATAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp ATGCGGGCAGTGTGGGTGCTGAGCTGCTGGAGGAGTAGCTCTCCACTCCCTGACCCTGGCCATCAGACCTaGCAGCAACAGTGGCAAGAG +
Preference number: 4 (lower is better)
Translates to: MRAVWVLSCWRSSSPLPDPGHQT*QQQWQE
Trigger: CTCTTGCCACTGTTGCTGGCAGGTCTGATGGCCAGG...GTCAGGGAGTGGAGAGCTACTCCTCCAGCAGCTCAGCACCCACACTGCCCGCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp GATCTGGTCCCGGTGGCCACACGCATGCGGGCAGTGTGGGTGCTGAGCTGCTGGGATCCATTCCAACCCTaGTTCATGGGTGCCCAAATC +
Preference number: 4 (lower is better)
Translates to: DLVPVATRMRAVWVLSCWDPFQP*FMGAQI
Trigger: GATTTGGGCACCCATGAAGCAGGGTTGGAATGGATC...CCAGCAGCTCAGCACCCACACTGCCCGCATGCGTGTGGCCACCGGGACCAGATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp GTATGCCACAATCACTCGGGATCTGGTCCCGGTGGCCACACGCATGCGGGCAGTAAAGGGGGCCCAGCCTaGCATGCAAGTGCACCTCTA +
Preference number: 4 (lower is better)
Translates to: VCHNHSGSGPGGHTHAGSKGGPA*HASAPL
Trigger: TAGAGGTGCACTTGCATGGCAGGCTGGGCCCCCTTT...ACTGCCCGCATGCGTGTGGCCACCGGGACCAGATCCCGAGTGATTGTGGCATAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp GTATGCCACAATCACTCGGGATCTGGTCCCGGTGGCCACACGCATGCGGGCAGTGTGAAGGGGCATCAGTaGTCCTGGAGGTGTTCCCCA +
Preference number: 4 (lower is better)
Translates to: VCHNHSGSGPGGHTHAGSVKGHQ*SWRCSP
Trigger: TGGGGAACACCTCCAGGAGCACTGATGCCCCTTCAC...ACTGCCCGCATGCGTGTGGCCACCGGGACCAGATCCCGAGTGATTGTGGCATAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp GATCTGGTCCCGGTGGCCACACGCATGCGGGCAGTGTGGGTGCTGAGCTGCTGGAAGCTAGGCTTGCATTaGCACCATTACCCCAAGTCC +
Preference number: 4 (lower is better)
Translates to: DLVPVATRMRAVWVLSCWKLGLH*HHYPKS
Trigger: GGACTTGGGGTAATGGTGGCAATGCAAGCCTAGCTT...CCAGCAGCTCAGCACCCACACTGCCCGCATGCGTGTGGCCACCGGGACCAGATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp CCCGGCACCTCCACACTCTCCACACTCGAGACTTGCAGATGCACGTGTGACGGTCAGGCTGTGGCCCGCTaGTCCAGCTGGAATTGGAAG +
Preference number: 4 (lower is better)
Translates to: PGTSTLSTLETCRCTCDGQAVAR*SSWNWK
Trigger: CTTCCAATTCCAGCTGGAGCAGCGGGCCACAGCCTG...ACCGTCACACGTGCATCTGCAAGTCTCGAGTGTGGAGAGTGTGGAGGTGCCGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR CCA 90 bp ATGCGGGCAGTGTGGGTGCTGAGCTGCTGGAGGAGTAGCTCTCCACTCCCTGACGTTGCCACCATTGACTaGTGGCGATGGAGAGCTGCC +
Preference number: 4 (lower is better)
Translates to: MRAVWVLSCWRSSSPLPDVATID*WRWRAA
Trigger: GGCAGCTCTCCATCGCCACCAGTCAATGGTGGCAAC...GTCAGGGAGTGGAGAGCTACTCCTCCAGCAGCTCAGCACCCACACTGCCCGCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp CACACACATGTGCGTCCCCCTTGCTCAGGATGTCTGGGTGTATGTACGAAGGCAGTAGCGGGCGGCGCTTaGCGGTTGTCCGTTCGGCAC +
Preference number: 4 (lower is better)
Translates to: HTHVRPPCSGCLGVCTKAVAGGA*RLSVRH
Trigger: GTGCCGAACGGACAACCGCCAAGCGCCGCCCGCTAC...TGCCTTCGTACATACACCCAGACATCCTGAGCAAGGGGGACGCACATGTGTGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp GTATGCCACAATCACTCGGGATCTGGTCCCGGTGGCCACACGCATGCGGGCAGTTGTCCAGATGCGGCTTaGGCCCAACAGGATGAGAGG +
Preference number: 4 (lower is better)
Translates to: VCHNHSGSGPGGHTHAGSCPDAA*AQQDER
Trigger: CCTCTCATCCTGTTGGGCCCAAGCCGCATCTGGACA...ACTGCCCGCATGCGTGTGGCCACCGGGACCAGATCCCGAGTGATTGTGGCATAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp ATGCGGGCAGTGTGGGTGCTGAGCTGCTGGAGGAGTAGCTCTCCACTCCCTGACCCCCAGCACACTTCCTaGGGTGACATAGGGGTCAGA +
Preference number: 4 (lower is better)
Translates to: MRAVWVLSCWRSSSPLPDPQHTS*GDIGVR
Trigger: TCTGACCCCTATGTCACCCCAGGAAGTGTGCTGGGG...GTCAGGGAGTGGAGAGCTACTCCTCCAGCAGCTCAGCACCCACACTGCCCGCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp AACTGCAGGCCCCCTGGAATTTACCTGGCCATCAGACCTGCCAGCAACAGTGGCCGCAGCTGGCGCACTTaGGGTTGCTGCAGGTGTAGG +
Preference number: 4 (lower is better)
Translates to: NCRPPGIYLAIRPASNSGRSWRT*GCCRCR
Trigger: CCTACACCTGCAGCAACCCCAAGTGCGCCAGCTGCG...GCCACTGTTGCTGGCAGGTCTGATGGCCAGGTAAATTCCAGGGGGCCTGCAGTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp GATCTGGTCCCGGTGGCCACACGCATGCGGGCAGTGTGGGTGCTGAGCTGCTGGCACCTCGTAGGTTCATaGCCTCTTTCTTCAGAGGCA +
Preference number: 4 (lower is better)
Translates to: DLVPVATRMRAVWVLSCWHLVGS*PLSSEA
Trigger: TGCCTCTGAAGAAAGAGGCCATGAACCTACGAGGTG...CCAGCAGCTCAGCACCCACACTGCCCGCATGCGTGTGGCCACCGGGACCAGATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp GATCTGGTCCCGGTGGCCACACGCATGCGGGCAGTGTGGGTGCTGAGCTGCTGGGACACGGGGACACCATaGACACAGAAACTGAAGAAC +
Preference number: 4 (lower is better)
Translates to: DLVPVATRMRAVWVLSCWDTGTP*TQKLKN
Trigger: GTTCTTCAGTTTCTGTGTCCATGGTGTCCCCGTGTC...CCAGCAGCTCAGCACCCACACTGCCCGCATGCGTGTGGCCACCGGGACCAGATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp ATGCGGGCAGTGTGGGTGCTGAGCTGCTGGAGGAGTAGCTCTCCACTCCCTGACCACACTGGAGTGCAGTaGTGCAATCTCGGCTCACCG +
Preference number: 4 (lower is better)
Translates to: MRAVWVLSCWRSSSPLPDHTGVQ*CNLGSP
Trigger: CGGTGAGCCGAGATTGCACCACTGCACTCCAGTGTG...GTCAGGGAGTGGAGAGCTACTCCTCCAGCAGCTCAGCACCCACACTGCCCGCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp AACTGCAGGCCCCCTGGAATTTACCTGGCCATCAGACCTGCCAGCAACAGTGGCCGAACCAGAAGCCTCTaGTTGTGGTGGCGGCGGCTG +
Preference number: 4 (lower is better)
Translates to: NCRPPGIYLAIRPASNSGRTRSL*LWWRRL
Trigger: CAGCCGCCGCCACCACAACCAGAGGCTTCTGGTTCG...GCCACTGTTGCTGGCAGGTCTGATGGCCAGGTAAATTCCAGGGGGCCTGCAGTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp ATGCGGGCAGTGTGGGTGCTGAGCTGCTGGAGGAGTAGCTCTCCACTCCCTGACGCCCGCTGCTCCAGCTaGAATTGGAAGGTCGAACGT +
Preference number: 4 (lower is better)
Translates to: MRAVWVLSCWRSSSPLPDARCSS*NWKVER
Trigger: ACGTTCGACCTTCCAATTCCAGCTGGAGCAGCGGGC...GTCAGGGAGTGGAGAGCTACTCCTCCAGCAGCTCAGCACCCACACTGCCCGCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
3UTR CAA 72 bp GGCAGTGGACAGGGTCGCCACTGGCTCGCAGGAGCCTaGGGATATGCTCCTGGCCCAGGGACACTAAGATTT +
Preference number: 4 (lower is better)
Translates to: GSGQGRHWLAGA*GYAPGPGTLRF
Trigger: AAATCTTAGTGTCCCTGGGCCAGGAGCATATCCCAAGGCTCCTGCGAGCCAGTGGCGACCCTGTCCACTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp CTTTGGTGGAAAAGACCCGGCACCTCCACACTCTCCACACTCGAGACTTGCAGAGATGGCGAGCTCCTGTaGCTGGCCCGTCACTCTCCC +
Preference number: 4 (lower is better)
Translates to: LWWKRPGTSTLSTLETCRDGELL*LARHSP
Trigger: GGGAGAGTGACGGGCCAGTCACAGGAGCTCGCCATC...TCTGCAAGTCTCGAGTGTGGAGAGTGTGGAGGTGCCGGGTCTTTTCCACCAAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR TCA 90 bp CCCGGCACCTCCACACTCTCCACACTCGAGACTTGCAGATGCACGTGTGACGGTTTGGGCCCAACAGGATaGGAGGGCGAGTGCTTCATG +
Preference number: 4 (lower is better)
Translates to: PGTSTLSTLETCRCTCDGLGPTG*EGECFM
Trigger: CATGAAGCACTCGCCCTCTCATCCTGTTGGGCCCAA...ACCGTCACACGTGCATCTGCAAGTCTCGAGTGTGGAGAGTGTGGAGGTGCCGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR TCA 90 bp GATCTGGTCCCGGTGGCCACACGCATGCGGGCAGTGTGGGTGCTGAGCTGCTGGATCTTGTTGGAGAGATaGGTGGGGTTGTGTCCTATG +
Preference number: 4 (lower is better)
Translates to: DLVPVATRMRAVWVLSCWILLER*VGLCPM
Trigger: CATAGGACACAACCCCACTCATCTCTCCAACAAGAT...CCAGCAGCTCAGCACCCACACTGCCCGCATGCGTGTGGCCACCGGGACCAGATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp CACACACATGTGCGTCCCCCTTGCTCAGGATGTCTGGGTGTATGTACGAAGGCATGGGGGCCCCCACAATaGAGCGCCAGCAAGATCGGC +
Preference number: 4 (lower is better)
Translates to: HTHVRPPCSGCLGVCTKAWGPPQ*SASKIG
Trigger: GCCGATCTTGCTGGCGCTTCATTGTGGGGGCCCCCA...TGCCTTCGTACATACACCCAGACATCCTGAGCAAGGGGGACGCACATGTGTGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp GATCTGGTCCCGGTGGCCACACGCATGCGGGCAGTGTGGGTGCTGAGCTGCTGGGCGCAGCAGGGTTTGTaGGTTCCCTATTTTCTTAAC +
Preference number: 4 (lower is better)
Translates to: DLVPVATRMRAVWVLSCWAQQGL*VPYFLN
Trigger: GTTAAGAAAATAGGGAACTCACAAACCCTGCTGCGC...CCAGCAGCTCAGCACCCACACTGCCCGCATGCGTGTGGCCACCGGGACCAGATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp GATCTGGTCCCGGTGGCCACACGCATGCGGGCAGTGTGGGTGCTGAGCTGCTGGGAGCTTGAAGGGCTCTaGATTCAGGAAAGGATGAGT +
Preference number: 4 (lower is better)
Translates to: DLVPVATRMRAVWVLSCWELEGL*IQERMS
Trigger: ACTCATCCTTTCCTGAATTCAGAGCCCTTCAAGCTC...CCAGCAGCTCAGCACCCACACTGCCCGCATGCGTGTGGCCACCGGGACCAGATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp GTATGCCACAATCACTCGGGATCTGGTCCCGGTGGCCACACGCATGCGGGCAGTGTCTGCAAGACAGCCTaGCAATCAGGATGTGTGGGC +
Preference number: 4 (lower is better)
Translates to: VCHNHSGSGPGGHTHAGSVCKTA*QSGCVG
Trigger: GCCCACACATCCTGATTGTCAGGCTGTCTTGCAGAC...ACTGCCCGCATGCGTGTGGCCACCGGGACCAGATCCCGAGTGATTGTGGCATAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp CACACACATGTGCGTCCCCCTTGCTCAGGATGTCTGGGTGTATGTACGAAGGCATTGCTCCAGGTGCTGTaGAGGGAGGAGGCCCTGCCC +
Preference number: 4 (lower is better)
Translates to: HTHVRPPCSGCLGVCTKALLQVL*REEALP
Trigger: GGGCAGGGCCTCCTCCCTGCACAGCACCTGGAGCAA...TGCCTTCGTACATACACCCAGACATCCTGAGCAAGGGGGACGCACATGTGTGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp CCCGGCACCTCCACACTCTCCACACTCGAGACTTGCAGATGCACGTGTGACGGTGGCTGCACGGGTGTGTaGAGACCTCTCGATTGTGCT +
Preference number: 4 (lower is better)
Translates to: PGTSTLSTLETCRCTCDGGCTGV*RPLDCA
Trigger: AGCACAATCGAGAGGTCTGCACACACCCGTGCAGCC...ACCGTCACACGTGCATCTGCAAGTCTCGAGTGTGGAGAGTGTGGAGGTGCCGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR GCA 90 bp GATCTGGTCCCGGTGGCCACACGCATGCGGGCAGTGTGGGTGCTGAGCTGCTGGCCACTGTTGGGAAACTaGTTGAGCATTGAGGCAGAA +
Preference number: 4 (lower is better)
Translates to: DLVPVATRMRAVWVLSCWPLLGN*LSIEAE
Trigger: TTCTGCCTCAATGCTCAAGCAGTTTCCCAACAGTGG...CCAGCAGCTCAGCACCCACACTGCCCGCATGCGTGTGGCCACCGGGACCAGATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp GATCTGGTCCCGGTGGCCACACGCATGCGGGCAGTGTGGGTGCTGAGCTGCTGGTTCTGTAACAACTGCTaGTGTTGCTGCTGCTGCAAG +
Preference number: 4 (lower is better)
Translates to: DLVPVATRMRAVWVLSCWFCNNC*CCCCCK
Trigger: CTTGCAGCAGCAGCAACAGCAGCAGTTGTTACAGAA...CCAGCAGCTCAGCACCCACACTGCCCGCATGCGTGTGGCCACCGGGACCAGATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp CCGGCACCTCCACACTCTCCACACTCGAGACTTGCAGATGCACGTGTGACGGTGCTGCTGCTGCTGCAGTaGACTCACCATTCGAGCCAG +
Preference number: 4 (lower is better)
Translates to: PAPPHSPHSRLADARVTVLLLLQ*THHSSQ
Trigger: CTGGCTCGAATGGTGAGTGCACTGCAGCAGCAGCAG...CACCGTCACACGTGCATCTGCAAGTCTCGAGTGTGGAGAGTGTGGAGGTGCCGG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR GCA 90 bp CCCGGCACCTCCACACTCTCCACACTCGAGACTTGCAGATGCACGTGTGACGGTCTGATCGGGGTGCTGTaGTGCTCCAGGGAGATGATG +
Preference number: 4 (lower is better)
Translates to: PGTSTLSTLETCRCTCDGLIGVL*CSREMM
Trigger: CATCATCTCCCTGGAGCAGCACAGCACCCCGATCAG...ACCGTCACACGTGCATCTGCAAGTCTCGAGTGTGGAGAGTGTGGAGGTGCCGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR GCA 90 bp CAAAGGGTAAAAGCGTGCTGCCCGCTCTGCACACGGCAGAAGCTGGAAAATGCCCGCACTTGGGGTTGCTaGAGGTGTAGGGGGCTGAGC +
Preference number: 4 (lower is better)
Translates to: QRVKACCPLCTRQKLENARTWGC*RCRGLS
Trigger: GCTCAGCCCCCTACACCTGCAGCAACCCCAAGTGCG...GGCATTTTCCAGCTTCTGCCGTGTGCAGAGCGGGCAGCACGCTTTTACCCTTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp CCCCTGTCTCCTCTCCCAAGTCCCAGAATCTCTTCCACTCAACTCTACACTGTGGCGCTGCTGCTCCACTaGCCGAGCCCAGTGGACCCA +
Preference number: 4 (lower is better)
Translates to: PLSPLPSPRISSTQLYTVALLLH*PSPVDP
Trigger: TGGGTCCACTGGGCTCGGGCAGTGGAGCAGCAGCGC...CACAGTGTAGAGTTGAGTGGAAGAGATTCTGGGACTTGGGAGAGGAGACAGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp AATGAAGCTGAAGGAATCGAGTGGGAGGGACTGTTCTCCTCTTTGGGGGAGCTCTGCCACCAGCGCTGCTaGTCCACTGCCCGAGCCCAG +
Preference number: 4 (lower is better)
Translates to: NEAEGIEWEGLFSSLGELCHQRC*STARAQ
Trigger: CTGGGCTCGGGCAGTGGAGCAGCAGCGCTGGTGGCA...GAGCTCCCCCAAAGAGGAGAACAGTCCCTCCCACTCGATTCCTTCAGCTTCATT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp CCCCTGTCTCCTCTCCCAAGTCCCAGAATCTCTTCCACTCAACTCTACACTGTGTGCTGCCACCAGCGCTaGTGCTCCACTGCCCGAGCC +
Preference number: 4 (lower is better)
Translates to: PLSPLPSPRISSTQLYTVCCHQR*CSTARA
Trigger: GGCTCGGGCAGTGGAGCAGCAGCGCTGGTGGCAGCA...CACAGTGTAGAGTTGAGTGGAAGAGATTCTGGGACTTGGGAGAGGAGACAGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp CCCCTGTCTCCTCTCCCAAGTCCCAGAATCTCTTCCACTCAACTCTACACTGTGCAAGATCGGCCCCGCTaGTGCCACCAGCGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: PLSPLPSPRISSTQLYTVQDRPR*CHQRCC
Trigger: GCAGCAGCGCTGGTGGCAGCAGCGGGGCCGATCTTG...CACAGTGTAGAGTTGAGTGGAAGAGATTCTGGGACTTGGGAGAGGAGACAGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp AACTGCAGGCCCCCTGGAATTTACCTGGCCATCAGACCTGCCAGCAACAGTGGCGCGGTCAGTGGGGGCTaGTGGAAGCAGAGCTTTTGC +
Preference number: 4 (lower is better)
Translates to: NCRPPGIYLAIRPASNSGAVSGG*WKQSFC
Trigger: GCAAAAGCTCTGCTTCCAGCAGCCCCCACTGACCGC...GCCACTGTTGCTGGCAGGTCTGATGGCCAGGTAAATTCCAGGGGGCCTGCAGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp AACTGCAGGCCCCCTGGAATTTACCTGGCCATCAGACCTGCCAGCAACAGTGGCCCCCTCCAACACAAATaGAAACCGGCTCCCCCGACC +
Preference number: 4 (lower is better)
Translates to: NCRPPGIYLAIRPASNSGPLQHK*KPAPPT
Trigger: GGTCGGGGGAGCCGGTTTGCATTTGTGTTGGAGGGG...GCCACTGTTGCTGGCAGGTCTGATGGCCAGGTAAATTCCAGGGGGCCTGCAGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp GTATGCCACAATCACTCGGGATCTGGTCCCGGTGGCCACACGCATGCGGGCAGTACATTCTGGAGTCCCTaGAGGGGATGGATCTGCTGG +
Preference number: 4 (lower is better)
Translates to: VCHNHSGSGPGGHTHAGSTFWSP*RGWICW
Trigger: CCAGCAGATCCATCCCCTGCAGGGACTCCAGAATGT...ACTGCCCGCATGCGTGTGGCCACCGGGACCAGATCCCGAGTGATTGTGGCATAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp ATGCGGGCAGTGTGGGTGCTGAGCTGCTGGAGGAGTAGCTCTCCACTCCCTGACTTCGTTCCCAGAACTTaGAGACTGGCACTGGCTCCC +
Preference number: 4 (lower is better)
Translates to: MRAVWVLSCWRSSSPLPDFVPRT*RLALAP
Trigger: GGGAGCCAGTGCCAGTCTGCAAGTTCTGGGAACGAA...GTCAGGGAGTGGAGAGCTACTCCTCCAGCAGCTCAGCACCCACACTGCCCGCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp CCCCTGTCTCCTCTCCCAAGTCCCAGAATCTCTTCCACTCAACTCTACACTGTGGTAGCGGGCGGCGCTTaGCGGTTGTCCGTTCGGCAC +
Preference number: 4 (lower is better)
Translates to: PLSPLPSPRISSTQLYTVVAGGA*RLSVRH
Trigger: GTGCCGAACGGACAACCGCCAAGCGCCGCCCGCTAC...CACAGTGTAGAGTTGAGTGGAAGAGATTCTGGGACTTGGGAGAGGAGACAGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp GCACCTCCACACTCTCCACACTCGAGACTTGCAGATGCACGTGTGACGGTGCCATCTTCCCAGCTGGGATaGCGAGCTCCTGTGACTGGC +
Preference number: 4 (lower is better)
Translates to: APPHSPHSRLADARVTVPSSQLG*RAPVTG
Trigger: GCCAGTCACAGGAGCTCGCCATCCCAGCTGGGAAGA...TGGCACCGTCACACGTGCATCTGCAAGTCTCGAGTGTGGAGAGTGTGGAGGTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR CCA 90 bp AACTGCAGGCCCCCTGGAATTTACCTGGCCATCAGACCTGCCAGCAACAGTGGCCCAGCAGGACCCGTATaGCCACCCAGTGTGTCACCA +
Preference number: 4 (lower is better)
Translates to: NCRPPGIYLAIRPASNSGPAGPV*PPSVSP
Trigger: TGGTGACACACTGGGTGGCCATACGGGTCCTGCTGG...GCCACTGTTGCTGGCAGGTCTGATGGCCAGGTAAATTCCAGGGGGCCTGCAGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp CACACACATGTGCGTCCCCCTTGCTCAGGATGTCTGGGTGTATGTACGAAGGCAGGTCAGACCAGGAGGTaGGCGGGGCAGCGGTGTAGT +
Preference number: 4 (lower is better)
Translates to: HTHVRPPCSGCLGVCTKAGQTRR*AGQRCS
Trigger: ACTACACCGCTGCCCCGCCCACCTCCTGGTCTGACC...TGCCTTCGTACATACACCCAGACATCCTGAGCAAGGGGGACGCACATGTGTGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp CAAAGGGTAAAAGCGTGCTGCCCGCTCTGCACACGGCAGAAGCTGGAAAATGCCCCCACGGGATCTGACTaGTTCTGGCCGGTCTCCAGC +
Preference number: 4 (lower is better)
Translates to: QRVKACCPLCTRQKLENAPTGSD*FWPVSS
Trigger: GCTGGAGACCGGCCAGAACCAGTCAGATCCCGTGGG...GGCATTTTCCAGCTTCTGCCGTGTGCAGAGCGGGCAGCACGCTTTTACCCTTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp GTATGCCACAATCACTCGGGATCTGGTCCCGGTGGCCACACGCATGCGGGCAGTCCCCTGGAATTTACCTaGCCATCAGACCTGCCAGCA +
Preference number: 4 (lower is better)
Translates to: VCHNHSGSGPGGHTHAGSPLEFT*PSDLPA
Trigger: TGCTGGCAGGTCTGATGGCCAGGTAAATTCCAGGGG...ACTGCCCGCATGCGTGTGGCCACCGGGACCAGATCCCGAGTGATTGTGGCATAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp ATGCGGGCAGTGTGGGTGCTGAGCTGCTGGAGGAGTAGCTCTCCACTCCCTGACGTGTGGAGAACATTCTaGAGTCCCTGCAGGGGATGG +
Preference number: 4 (lower is better)
Translates to: MRAVWVLSCWRSSSPLPDVWRTF*SPCRGW
Trigger: CCATCCCCTGCAGGGACTCCAGAATGTTCTCCACAC...GTCAGGGAGTGGAGAGCTACTCCTCCAGCAGCTCAGCACCCACACTGCCCGCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp GATCTGGTCCCGGTGGCCACACGCATGCGGGCAGTGTGGGTGCTGAGCTGCTGGATACACTTTGGTCACTaGTGTGTGCAAAGGGTGGTG +
Preference number: 4 (lower is better)
Translates to: DLVPVATRMRAVWVLSCWIHFGH*CVQRVV
Trigger: CACCACCCTTTGCACACACCAGTGACCAAAGTGTAT...CCAGCAGCTCAGCACCCACACTGCCCGCATGCGTGTGGCCACCGGGACCAGATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp ATGCGGGCAGTGTGGGTGCTGAGCTGCTGGAGGAGTAGCTCTCCACTCCCTGACCCCCAACAGGGAGCCTaGGCATTGCCTTGGTTTTCA +
Preference number: 4 (lower is better)
Translates to: MRAVWVLSCWRSSSPLPDPQQGA*ALPWFS
Trigger: TGAAAACCAAGGCAATGCCCAGGCTCCCTGTTGGGG...GTCAGGGAGTGGAGAGCTACTCCTCCAGCAGCTCAGCACCCACACTGCCCGCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp AATGAAGCTGAAGGAATCGAGTGGGAGGGACTGTTCTCCTCTTTGGGGGAGCTCGTTGCCTGGAGGTGGTaGGGGTGGGCCTCCCCACGA +
Preference number: 4 (lower is better)
Translates to: NEAEGIEWEGLFSSLGELVAWRW*GWASPR
Trigger: TCGTGGGGAGGCCCACCCCCACCACCTCCAGGCAAC...GAGCTCCCCCAAAGAGGAGAACAGTCCCTCCCACTCGATTCCTTCAGCTTCATT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp ATGCGGGCAGTGTGGGTGCTGAGCTGCTGGAGGAGTAGCTCTCCACTCCCTGACGGTGCTGGGCCCCCTTaGGAATTCTTATCCCACAGA +
Preference number: 4 (lower is better)
Translates to: MRAVWVLSCWRSSSPLPDGAGPP*EFLSHR
Trigger: TCTGTGGGATAAGAATTCCCAAGGGGGCCCAGCACC...GTCAGGGAGTGGAGAGCTACTCCTCCAGCAGCTCAGCACCCACACTGCCCGCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp CCCCTGTCTCCTCTCCCAAGTCCCAGAATCTCTTCCACTCAACTCTACACTGTGGATGGCGAGCTCCTGTaGCTGGCCCGTCACTCTCCC +
Preference number: 4 (lower is better)
Translates to: PLSPLPSPRISSTQLYTVDGELL*LARHSP
Trigger: GGGAGAGTGACGGGCCAGTCACAGGAGCTCGCCATC...CACAGTGTAGAGTTGAGTGGAAGAGATTCTGGGACTTGGGAGAGGAGACAGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp ATGCGGGCAGTGTGGGTGCTGAGCTGCTGGAGGAGTAGCTCTCCACTCCCTGACAGCATGGCAATTTGTTaGGGAGATAACTGGGGCCCC +
Preference number: 4 (lower is better)
Translates to: MRAVWVLSCWRSSSPLPDSMAIC*GDNWGP
Trigger: GGGGCCCCAGTTATCTCCTCAACAAATTGCCATGCT...GTCAGGGAGTGGAGAGCTACTCCTCCAGCAGCTCAGCACCCACACTGCCCGCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp AATGAAGCTGAAGGAATCGAGTGGGAGGGACTGTTCTCCTCTTTGGGGGAGCTCGGGCCAGGCACCAGGTaGAGGCAGCGAGGTGTTGAG +
Preference number: 4 (lower is better)
Translates to: NEAEGIEWEGLFSSLGELGPGTR*RQRGVE
Trigger: CTCAACACCTCGCTGCCTTCACCTGGTGCCTGGCCC...GAGCTCCCCCAAAGAGGAGAACAGTCCCTCCCACTCGATTCCTTCAGCTTCATT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp GTATGCCACAATCACTCGGGATCTGGTCCCGGTGGCCACACGCATGCGGGCAGTGTGCCAGAAAGCGGCTaGCTTCATCATCAGTGGCAA +
Preference number: 4 (lower is better)
Translates to: VCHNHSGSGPGGHTHAGSVPESG*LHHQWQ
Trigger: TTGCCACTGATGATGAAGTCAGCCGCTTTCTGGCAC...ACTGCCCGCATGCGTGTGGCCACCGGGACCAGATCCCGAGTGATTGTGGCATAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp GATCTGGTCCCGGTGGCCACACGCATGCGGGCAGTGTGGGTGCTGAGCTGCTGGCTATGTAATGAGAGGTaGCCAGCAAGCCTGTATCTA +
Preference number: 4 (lower is better)
Translates to: DLVPVATRMRAVWVLSCWLCNER*PASLYL
Trigger: TAGATACAGGCTTGCTGGTCACCTCTCATTACATAG...CCAGCAGCTCAGCACCCACACTGCCCGCATGCGTGTGGCCACCGGGACCAGATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp ATGCGGGCAGTGTGGGTGCTGAGCTGCTGGAGGAGTAGCTCTCCACTCCCTGACTCCAGGGTTGGGGACTaGGGGATCAGAGATGTTACA +
Preference number: 4 (lower is better)
Translates to: MRAVWVLSCWRSSSPLPDSRVGD*GIRDVT
Trigger: TGTAACATCTCTGATCCCTCAGTCCCCAACCCTGGA...GTCAGGGAGTGGAGAGCTACTCCTCCAGCAGCTCAGCACCCACACTGCCCGCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp GATCTGGTCCCGGTGGCCACACGCATGCGGGCAGTGTGGGTGCTGAGCTGCTGGTGCGTCTCTGTGAAGTaGCTCCCATTATTCACTGTT +
Preference number: 4 (lower is better)
Translates to: DLVPVATRMRAVWVLSCWCVSVK*LPLFTV
Trigger: AACAGTGAATAATGGGAGTCACTTCACAGAGACGCA...CCAGCAGCTCAGCACCCACACTGCCCGCATGCGTGTGGCCACCGGGACCAGATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp AACTGCAGGCCCCCTGGAATTTACCTGGCCATCAGACCTGCCAGCAACAGTGGCAGGGGGTGGCCCTTTTaGTTGTCCCATGCTCCAGTG +
Preference number: 4 (lower is better)
Translates to: NCRPPGIYLAIRPASNSGRGWPF*LSHAPV
Trigger: CACTGGAGCATGGGACAATCAAAAGGGCCACCCCCT...GCCACTGTTGCTGGCAGGTCTGATGGCCAGGTAAATTCCAGGGGGCCTGCAGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp CCGGCACCTCCACACTCTCCACACTCGAGACTTGCAGATGCACGTGTGACGGTGGTCTGCAAGACAGCCTaGCAATCAGGATGTGTGGGC +
Preference number: 4 (lower is better)
Translates to: PAPPHSPHSRLADARVTVVCKTA*QSGCVG
Trigger: GCCCACACATCCTGATTGTCAGGCTGTCTTGCAGAC...CACCGTCACACGTGCATCTGCAAGTCTCGAGTGTGGAGAGTGTGGAGGTGCCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR TCA 90 bp AACTGCAGGCCCCCTGGAATTTACCTGGCCATCAGACCTGCCAGCAACAGTGGCCCAGAAGACCATCCTTaGTTGGGCTGGCGTCCACCT +
Preference number: 4 (lower is better)
Translates to: NCRPPGIYLAIRPASNSGPEDHP*LGWRPP
Trigger: AGGTGGACGCCAGCCCAATCAAGGATGGTCTTCTGG...GCCACTGTTGCTGGCAGGTCTGATGGCCAGGTAAATTCCAGGGGGCCTGCAGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp CCTCCACACTCTCCACACTCGAGACTTGCAGATGCACGTGTGACGGTGCCATTCCATCTCCTGACCTTGTaGTCTGCCCGCCTTGGCCTC +
Preference number: 4 (lower is better)
Translates to: PPHSPHSRLADARVTVPFHLLTL*SARLGL
Trigger: GAGGCCAAGGCGGGCAGATCACAAGGTCAGGAGATG...GAATGGCACCGTCACACGTGCATCTGCAAGTCTCGAGTGTGGAGAGTGTGGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR GCA 90 bp AACTTTTACAGCCACCCCTCTGGGAGTTGTACACACCTTTCAGTAGCCGAAGGGCGTGCCGGCTCCGAGTaGGCGGCGTTTCGCTGTGAG +
Preference number: 4 (lower is better)
Translates to: NFYSHPSGSCTHLSVAEGRAGSE*AAFRCE
Trigger: CTCACAGCGAAACGCCGCGCACTCGGAGCCGGCACG...CCCTTCGGCTACTGAAAGGTGTGTACAACTCCCAGAGGGGTGGCTGTAAAAGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301923.13
CDS-3UTR GCA 90 bp GTATGCCACAATCACTCGGGATCTGGTCCCGGTGGCCACACGCATGCGGGCAGTCCAGCCTGTGGTCGATaGTCCTGTATCATCCATCTC +
Preference number: 4 (lower is better)
Translates to: VCHNHSGSGPGGHTHAGSPACGR*SCIIHL
Trigger: GAGATGGATGATACAGGAGCATCGACCACAGGCTGG...ACTGCCCGCATGCGTGTGGCCACCGGGACCAGATCCCGAGTGATTGTGGCATAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301923.13
ENST00000454349.7
CDS-3UTR GCA 90 bp CAAAGGGTAAAAGCGTGCTGCCCGCTCTGCACACGGCAGAAGCTGGAAAATGCCAACTGGGGAGGCACTTaGGCCCGGAGACTGGGAGAA +
Preference number: 4 (lower is better)
Translates to: QRVKACCPLCTRQKLENANWGGT*ARRLGE
Trigger: TTCTCCCAGTCTCCGGGCGCAAGTGCCTCCCCAGTT...GGCATTTTCCAGCTTCTGCCGTGTGCAGAGCGGGCAGCACGCTTTTACCCTTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp AACTGCAGGCCCCCTGGAATTTACCTGGCCATCAGACCTGCCAGCAACAGTGGCCTGCTGCTGCTGCAGTaGACTCACCATTCGAGCCAG +
Preference number: 4 (lower is better)
Translates to: NCRPPGIYLAIRPASNSGLLLLQ*THHSSQ
Trigger: CTGGCTCGAATGGTGAGTGCACTGCAGCAGCAGCAG...GCCACTGTTGCTGGCAGGTCTGATGGCCAGGTAAATTCCAGGGGGCCTGCAGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp CCGGCACCTCCACACTCTCCACACTCGAGACTTGCAGATGCACGTGTGACGGTGTGCTGCTGCTGCTGCTaGTGCAGTGCACTCACCATT +
Preference number: 4 (lower is better)
Translates to: PAPPHSPHSRLADARVTVCCCCC*CSALTI
Trigger: AATGGTGAGTGCACTGCAGCAGCAGCAGCAGCAGCA...CACCGTCACACGTGCATCTGCAAGTCTCGAGTGTGGAGAGTGTGGAGGTGCCGG
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR GCA 90 bp AACTGCAGGCCCCCTGGAATTTACCTGGCCATCAGACCTGCCAGCAACAGTGGCCCGCCTCCTGTTTGGTaGTGTATCGGATCAGGGCAG +
Preference number: 4 (lower is better)
Translates to: NCRPPGIYLAIRPASNSGPPPVW*CIGSGQ
Trigger: CTGCCCTGATCCGATACAGCACCAAACAGGAGGCGG...GCCACTGTTGCTGGCAGGTCTGATGGCCAGGTAAATTCCAGGGGGCCTGCAGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp AACTGCAGGCCCCCTGGAATTTACCTGGCCATCAGACCTGCCAGCAACAGTGGCAGGGGGCTGAGCTTGTaGCAGAAAGCGGCTGACTTC +
Preference number: 4 (lower is better)
Translates to: NCRPPGIYLAIRPASNSGRGLSL*QKAADF
Trigger: GAAGTCAGCCGCTTTCTGGCACAAGCTCAGCCCCCT...GCCACTGTTGCTGGCAGGTCTGATGGCCAGGTAAATTCCAGGGGGCCTGCAGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp AACTTTTACAGCCACCCCTCTGGGAGTTGTACACACCTTTCAGTAGCCGAAGGGTGCCACCAGCGCTGCTaGTCCACTGCCCGAGCCCAG +
Preference number: 4 (lower is better)
Translates to: NFYSHPSGSCTHLSVAEGCHQRC*STARAQ
Trigger: CTGGGCTCGGGCAGTGGAGCAGCAGCGCTGGTGGCA...CCCTTCGGCTACTGAAAGGTGTGTACAACTCCCAGAGGGGTGGCTGTAAAAGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp ATGCGGGCAGTGTGGGTGCTGAGCTGCTGGAGGAGTAGCTCTCCACTCCCTGACGTAAAGGAGCAGGGCTaGCCATCCTATGGGGATCTT +
Preference number: 4 (lower is better)
Translates to: MRAVWVLSCWRSSSPLPDVKEQG*PSYGDL
Trigger: AAGATCCCCATAGGATGGGCAGCCCTGCTCCTTTAC...GTCAGGGAGTGGAGAGCTACTCCTCCAGCAGCTCAGCACCCACACTGCCCGCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp CACACACATGTGCGTCCCCCTTGCTCAGGATGTCTGGGTGTATGTACGAAGGCAGCGTGCTGCCCGCTCTaGACACGGCAGAAGCTGGAA +
Preference number: 4 (lower is better)
Translates to: HTHVRPPCSGCLGVCTKAACCPL*TRQKLE
Trigger: TTCCAGCTTCTGCCGTGTGCAGAGCGGGCAGCACGC...TGCCTTCGTACATACACCCAGACATCCTGAGCAAGGGGGACGCACATGTGTGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp CAAAGGGTAAAAGCGTGCTGCCCGCTCTGCACACGGCAGAAGCTGGAAAATGCCAGGGTAAAAGCGTGCTaGCCGCTCTGCACACGGCAG +
Preference number: 4 (lower is better)
Translates to: QRVKACCPLCTRQKLENARVKAC*PLCTRQ
Trigger: CTGCCGTGTGCAGAGCGGGCAGCACGCTTTTACCCT...GGCATTTTCCAGCTTCTGCCGTGTGCAGAGCGGGCAGCACGCTTTTACCCTTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp ATGCGGGCAGTGTGGGTGCTGAGCTGCTGGAGGAGTAGCTCTCCACTCCCTGACCCCACCCCTGATCCTTaGTGGGATTCTCATTCCAAG +
Preference number: 4 (lower is better)
Translates to: MRAVWVLSCWRSSSPLPDPTPDP*WDSHSK
Trigger: CTTGGAATGAGAATCCCAGCAAGGATCAGGGGTGGG...GTCAGGGAGTGGAGAGCTACTCCTCCAGCAGCTCAGCACCCACACTGCCCGCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp ATGCGGGCAGTGTGGGTGCTGAGCTGCTGGAGGAGTAGCTCTCCACTCCCTGACATTGACTGGTGGCGATaGAGAGCTGCCAATTGGGCT +
Preference number: 4 (lower is better)
Translates to: MRAVWVLSCWRSSSPLPDIDWWR*RAANWA
Trigger: AGCCCAATTGGCAGCTCTCCATCGCCACCAGTCAAT...GTCAGGGAGTGGAGAGCTACTCCTCCAGCAGCTCAGCACCCACACTGCCCGCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp ATGCGGGCAGTGTGGGTGCTGAGCTGCTGGAGGAGTAGCTCTCCACTCCCTGACTGTTCCCCCAGCCTGTaGTCGATGCTCCTGTATCAT +
Preference number: 4 (lower is better)
Translates to: MRAVWVLSCWRSSSPLPDCSPSL*SMLLYH
Trigger: ATGATACAGGAGCATCGACCACAGGCTGGGGGAACA...GTCAGGGAGTGGAGAGCTACTCCTCCAGCAGCTCAGCACCCACACTGCCCGCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301923.13
ENST00000454349.7
CDS-3UTR CCA 90 bp CAAAGGGTAAAAGCGTGCTGCCCGCTCTGCACACGGCAGAAGCTGGAAAATGCCTCTTCCCAGCTGGGATaGCGAGCTCCTGTGACTGGC +
Preference number: 4 (lower is better)
Translates to: QRVKACCPLCTRQKLENASSQLG*RAPVTG
Trigger: GCCAGTCACAGGAGCTCGCCATCCCAGCTGGGAAGA...GGCATTTTCCAGCTTCTGCCGTGTGCAGAGCGGGCAGCACGCTTTTACCCTTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp ATGCGGGCAGTGTGGGTGCTGAGCTGCTGGAGGAGTAGCTCTCCACTCCCTGACCTTGCGCCCGGAGACTaGGAGAAGAATTTAGTGGCT +
Preference number: 4 (lower is better)
Translates to: MRAVWVLSCWRSSSPLPDLAPGD*EKNLVA
Trigger: AGCCACTAAATTCTTCTCCCAGTCTCCGGGCGCAAG...GTCAGGGAGTGGAGAGCTACTCCTCCAGCAGCTCAGCACCCACACTGCCCGCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp CAAAGGGTAAAAGCGTGCTGCCCGCTCTGCACACGGCAGAAGCTGGAAAATGCCCGAGTGCTTCATGCCTaGCTGCCTCTGCTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: QRVKACCPLCTRQKLENARVLHA*LPLLLL
Trigger: CAGCAGCAGCAGAGGCAGCCAGGCATGAAGCACTCG...GGCATTTTCCAGCTTCTGCCGTGTGCAGAGCGGGCAGCACGCTTTTACCCTTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp GATCTGGTCCCGGTGGCCACACGCATGCGGGCAGTGTGGGTGCTGAGCTGCTGGTTGTTGGTGGAGATTTaGCAGGTAACCAGCTATCAC +
Preference number: 4 (lower is better)
Translates to: DLVPVATRMRAVWVLSCWLLVEI*QVTSYH
Trigger: GTGATAGCTGGTTACCTGCCAAATCTCCACCAACAA...CCAGCAGCTCAGCACCCACACTGCCCGCATGCGTGTGGCCACCGGGACCAGATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp AACTGCAGGCCCCCTGGAATTTACCTGGCCATCAGACCTGCCAGCAACAGTGGCTGGCCGCCTCCTGTTTaGTGCTGTATCGGATCAGGG +
Preference number: 4 (lower is better)
Translates to: NCRPPGIYLAIRPASNSGWPPPV*CCIGSG
Trigger: CCCTGATCCGATACAGCACCAAACAGGAGGCGGCCA...GCCACTGTTGCTGGCAGGTCTGATGGCCAGGTAAATTCCAGGGGGCCTGCAGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp CAAAGGGTAAAAGCGTGCTGCCCGCTCTGCACACGGCAGAAGCTGGAAAATGCCGTGCAGTTTGGGCCTTaGCCGCCTCCTGTTTGGTGC +
Preference number: 4 (lower is better)
Translates to: QRVKACCPLCTRQKLENAVQFGP*PPPVWC
Trigger: GCACCAAACAGGAGGCGGCCAAGGCCCAAACTGCAC...GGCATTTTCCAGCTTCTGCCGTGTGCAGAGCGGGCAGCACGCTTTTACCCTTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp CACACACATGTGCGTCCCCCTTGCTCAGGATGTCTGGGTGTATGTACGAAGGCACCCACGGGATCTGACTaGTTCTGGCCGGTCTCCAGC +
Preference number: 4 (lower is better)
Translates to: HTHVRPPCSGCLGVCTKAPTGSD*FWPVSS
Trigger: GCTGGAGACCGGCCAGAACCAGTCAGATCCCGTGGG...TGCCTTCGTACATACACCCAGACATCCTGAGCAAGGGGGACGCACATGTGTGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp GTATGCCACAATCACTCGGGATCTGGTCCCGGTGGCCACACGCATGCGGGCAGTACTGCCCGAGCCCAGTaGACCCACCAAAAAGATTCA +
Preference number: 4 (lower is better)
Translates to: VCHNHSGSGPGGHTHAGSTARAQ*THQKDS
Trigger: TGAATCTTTTTGGTGGGTCCACTGGGCTCGGGCAGT...ACTGCCCGCATGCGTGTGGCCACCGGGACCAGATCCCGAGTGATTGTGGCATAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp CACACACATGTGCGTCCCCCTTGCTCAGGATGTCTGGGTGTATGTACGAAGGCAGGCTCGCAGGAGCCTTaGGATATGCTCCTGGCCCAG +
Preference number: 4 (lower is better)
Translates to: HTHVRPPCSGCLGVCTKAGSQEP*DMLLAQ
Trigger: CTGGGCCAGGAGCATATCCCAAGGCTCCTGCGAGCC...TGCCTTCGTACATACACCCAGACATCCTGAGCAAGGGGGACGCACATGTGTGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp AATGAAGCTGAAGGAATCGAGTGGGAGGGACTGTTCTCCTCTTTGGGGGAGCTCCGCATGCGGGCAGTGTaGGTGCTGAGCTGCTGGAGG +
Preference number: 4 (lower is better)
Translates to: NEAEGIEWEGLFSSLGELRMRAV*VLSCWR
Trigger: CCTCCAGCAGCTCAGCACCCACACTGCCCGCATGCG...GAGCTCCCCCAAAGAGGAGAACAGTCCCTCCCACTCGATTCCTTCAGCTTCATT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp ACTTTCAGGTCAGCACGAGTGAAGCGTGGTTTCCTGAGCTTGAAGGGCTCTGAAGGGATCTGGTCCCGGTaGCCACACGCATGCGGGCAG +
Preference number: 4 (lower is better)
Translates to: TFRSARVKRGFLSLKGSEGIWSR*PHACGQ
Trigger: CTGCCCGCATGCGTGTGGCCACCGGGACCAGATCCC...TTCAGAGCCCTTCAAGCTCAGGAAACCACGCTTCACTCGTGCTGACCTGAAAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp GATCTGGTCCCGGTGGCCACACGCATGCGGGCAGTGTGGGTGCTGAGCTGCTGGTTTTCCAGAGAACACTaGAGCCTGTGGAGTTCCATT +
Preference number: 4 (lower is better)
Translates to: DLVPVATRMRAVWVLSCWFSREH*SLWSSI
Trigger: AATGGAACTCCACAGGCTCCAGTGTTCTCTGGAAAA...CCAGCAGCTCAGCACCCACACTGCCCGCATGCGTGTGGCCACCGGGACCAGATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp ATGCGGGCAGTGTGGGTGCTGAGCTGCTGGAGGAGTAGCTCTCCACTCCCTGACAGCACGAGTGAAGCGTaGTTTCCTGAGCTTGAAGGG +
Preference number: 4 (lower is better)
Translates to: MRAVWVLSCWRSSSPLPDSTSEA*FPELEG
Trigger: CCCTTCAAGCTCAGGAAACCACGCTTCACTCGTGCT...GTCAGGGAGTGGAGAGCTACTCCTCCAGCAGCTCAGCACCCACACTGCCCGCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp GTATGCCACAATCACTCGGGATCTGGTCCCGGTGGCCACACGCATGCGGGCAGTCACCTCGCAGCTCATTaGCTTCATACAGCCTGCCAA +
Preference number: 4 (lower is better)
Translates to: VCHNHSGSGPGGHTHAGSHLAAH*LHTACQ
Trigger: TTGGCAGGCTGTATGAAGCCAATGAGCTGCGAGGTG...ACTGCCCGCATGCGTGTGGCCACCGGGACCAGATCCCGAGTGATTGTGGCATAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp GATCTGGTCCCGGTGGCCACACGCATGCGGGCAGTGTGGGTGCTGAGCTGCTGGACATGGCTTTCAGGGTaGTTTGCACATCTCCTTACA +
Preference number: 4 (lower is better)
Translates to: DLVPVATRMRAVWVLSCWTWLSG*FAHLLT
Trigger: TGTAAGGAGATGTGCAAACCACCCTGAAAGCCATGT...CCAGCAGCTCAGCACCCACACTGCCCGCATGCGTGTGGCCACCGGGACCAGATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp GATCTGGTCCCGGTGGCCACACGCATGCGGGCAGTGTGGGTGCTGAGCTGCTGGAGCCCCCTAGGATTATaGAACCCAAAGCAGCATTTA +
Preference number: 4 (lower is better)
Translates to: DLVPVATRMRAVWVLSCWSPLGL*NPKQHL
Trigger: TAAATGCTGCTTTGGGTTCCATAATCCTAGGGGGCT...CCAGCAGCTCAGCACCCACACTGCCCGCATGCGTGTGGCCACCGGGACCAGATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp GATCTGGTCCCGGTGGCCACACGCATGCGGGCAGTGTGGGTGCTGAGCTGCTGGCTCTGTCGGCCATTTTaGCTTGAACTAACTCTCTCT +
Preference number: 4 (lower is better)
Translates to: DLVPVATRMRAVWVLSCWLCRPF*LELTLS
Trigger: AGAGAGAGTTAGTTCAAGCCAAAATGGCCGACAGAG...CCAGCAGCTCAGCACCCACACTGCCCGCATGCGTGTGGCCACCGGGACCAGATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp GTATGCCACAATCACTCGGGATCTGGTCCCGGTGGCCACACGCATGCGGGCAGTCCAGAACTTGCAGACTaGCACTGGCTCCCTTTTCCT +
Preference number: 4 (lower is better)
Translates to: VCHNHSGSGPGGHTHAGSPELAD*HWLPFP
Trigger: AGGAAAAGGGAGCCAGTGCCAGTCTGCAAGTTCTGG...ACTGCCCGCATGCGTGTGGCCACCGGGACCAGATCCCGAGTGATTGTGGCATAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp GATCTGGTCCCGGTGGCCACACGCATGCGGGCAGTGTGGGTGCTGAGCTGCTGGTCCAGTGCTAGAATTTaGTTGGTTTGGACCACTCCA +
Preference number: 4 (lower is better)
Translates to: DLVPVATRMRAVWVLSCWSSARI*LVWTTP
Trigger: TGGAGTGGTCCAAACCAACCAAATTCTAGCACTGGA...CCAGCAGCTCAGCACCCACACTGCCCGCATGCGTGTGGCCACCGGGACCAGATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp GCACCTCCACACTCTCCACACTCGAGACTTGCAGATGCACGTGTGACGGTGCCAGACAATCAGGATGTGTaGGCCTGTACGACCGACGGC +
Preference number: 4 (lower is better)
Translates to: APPHSPHSRLADARVTVPDNQDV*ACTTDG
Trigger: GCCGTCGGTCGTACAGGCCCACACATCCTGATTGTC...TGGCACCGTCACACGTGCATCTGCAAGTCTCGAGTGTGGAGAGTGTGGAGGTGC
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR CCA 90 bp GCACCTCCACACTCTCCACACTCGAGACTTGCAGATGCACGTGTGACGGTGCCAAGCCCCCTGAGTTCTTaGTCTGTGTGGCAGCGCTCT +
Preference number: 4 (lower is better)
Translates to: APPHSPHSRLADARVTVPSPLSS*SVWQRS
Trigger: AGAGCGCTGCCACACAGACCAAGAACTCAGGGGGCT...TGGCACCGTCACACGTGCATCTGCAAGTCTCGAGTGTGGAGAGTGTGGAGGTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR CCA 90 bp CTCTCCACACTCGAGACTTGCAGATGCACGTGTGACGGTGCCATTCTTCGTATAGTTGCCTGGAGGTGGTaGGGGTGGGCCTCCCCACGA +
Preference number: 4 (lower is better)
Translates to: LSTLETCRCTCDGAILRIVAWRW*GWASPR
Trigger: TCGTGGGGAGGCCCACCCCCACCACCTCCAGGCAAC...TATACGAAGAATGGCACCGTCACACGTGCATCTGCAAGTCTCGAGTGTGGAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR CCA 90 bp ATGCGGGCAGTGTGGGTGCTGAGCTGCTGGAGGAGTAGCTCTCCACTCCCTGACTGCTCCAGCTGGAATTaGAAGGTCGAACGTTGCCTG +
Preference number: 4 (lower is better)
Translates to: MRAVWVLSCWRSSSPLPDCSSWN*KVERCL
Trigger: CAGGCAACGTTCGACCTTCCAATTCCAGCTGGAGCA...GTCAGGGAGTGGAGAGCTACTCCTCCAGCAGCTCAGCACCCACACTGCCCGCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp AACTTTTACAGCCACCCCTCTGGGAGTTGTACACACCTTTCAGTAGCCGAAGGGGATGGCGAGCTCCTGTaGCTGGCCCGTCACTCTCCC +
Preference number: 4 (lower is better)
Translates to: NFYSHPSGSCTHLSVAEGDGELL*LARHSP
Trigger: GGGAGAGTGACGGGCCAGTCACAGGAGCTCGCCATC...CCCTTCGGCTACTGAAAGGTGTGTACAACTCCCAGAGGGGTGGCTGTAAAAGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp AACTGCAGGCCCCCTGGAATTTACCTGGCCATCAGACCTGCCAGCAACAGTGGCTTGTCCCCAGCTTGCTaGGTTGTGGGAGGAAGCACT +
Preference number: 4 (lower is better)
Translates to: NCRPPGIYLAIRPASNSGLSPAC*VVGGST
Trigger: AGTGCTTCCTCCCACAACTCAGCAAGCTGGGGACAA...GCCACTGTTGCTGGCAGGTCTGATGGCCAGGTAAATTCCAGGGGGCCTGCAGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp GATCTGGTCCCGGTGGCCACACGCATGCGGGCAGTGTGGGTGCTGAGCTGCTGGCAGCAATCCCATATTTaGAAACTGTTTGGCAAGAGG +
Preference number: 4 (lower is better)
Translates to: DLVPVATRMRAVWVLSCWQQSHI*KLFGKR
Trigger: CCTCTTGCCAAACAGTTTTCAAATATGGGATTGCTG...CCAGCAGCTCAGCACCCACACTGCCCGCATGCGTGTGGCCACCGGGACCAGATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp CAAAGGGTAAAAGCGTGCTGCCCGCTCTGCACACGGCAGAAGCTGGAAAATGCCTTGGGCCCAACAGGATaGGAGGGCGAGTGCTTCATG +
Preference number: 4 (lower is better)
Translates to: QRVKACCPLCTRQKLENALGPTG*EGECFM
Trigger: CATGAAGCACTCGCCCTCTCATCCTGTTGGGCCCAA...GGCATTTTCCAGCTTCTGCCGTGTGCAGAGCGGGCAGCACGCTTTTACCCTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp CAAAGGGTAAAAGCGTGCTGCCCGCTCTGCACACGGCAGAAGCTGGAAAATGCCCCATGCCGCCAGAGCTaGAGCCAGAACCATATCCAG +
Preference number: 4 (lower is better)
Translates to: QRVKACCPLCTRQKLENAPCRQS*SQNHIQ
Trigger: CTGGATATGGTTCTGGCTTCAGCTCTGGCGGCATGG...GGCATTTTCCAGCTTCTGCCGTGTGCAGAGCGGGCAGCACGCTTTTACCCTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp AACTTTTACAGCCACCCCTCTGGGAGTTGTACACACCTTTCAGTAGCCGAAGGGGGGCCAGGCACCAGGTaGAGGCAGCGAGGTGTTGAG +
Preference number: 4 (lower is better)
Translates to: NFYSHPSGSCTHLSVAEGGPGTR*RQRGVE
Trigger: CTCAACACCTCGCTGCCTTCACCTGGTGCCTGGCCC...CCCTTCGGCTACTGAAAGGTGTGTACAACTCCCAGAGGGGTGGCTGTAAAAGTT
58% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp CAAAGGGTAAAAGCGTGCTGCCCGCTCTGCACACGGCAGAAGCTGGAAAATGCCGCTGCTCCAGGGAGATaGTGGTTTGGGGTTGGTCAG +
Preference number: 4 (lower is better)
Translates to: QRVKACCPLCTRQKLENAAAPGR*WFGVGQ
Trigger: CTGACCAACCCCAAACCATCATCTCCCTGGAGCAGC...GGCATTTTCCAGCTTCTGCCGTGTGCAGAGCGGGCAGCACGCTTTTACCCTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp CCCGGCACCTCCACACTCTCCACACTCGAGACTTGCAGATGCACGTGTGACGGTGTAACTAGGACGAACTaGGCCACCATCACTCCAGGT +
Preference number: 4 (lower is better)
Translates to: PGTSTLSTLETCRCTCDGVTRTN*ATITPG
Trigger: ACCTGGAGTGATGGTGGCTCAGTTCGTCCTAGTTAC...ACCGTCACACGTGCATCTGCAAGTCTCGAGTGTGGAGAGTGTGGAGGTGCCGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR TCA 90 bp CAAAGGGTAAAAGCGTGCTGCCCGCTCTGCACACGGCAGAAGCTGGAAAATGCCTGCAGATGCCAAGTGTaGCCACCTACCCACAGAGGG +
Preference number: 4 (lower is better)
Translates to: QRVKACCPLCTRQKLENACRCQV*PPTHRG
Trigger: CCCTCTGTGGGTAGGTGGTCACACTTGGCATCTGCA...GGCATTTTCCAGCTTCTGCCGTGTGCAGAGCGGGCAGCACGCTTTTACCCTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp CACACACATGTGCGTCCCCCTTGCTCAGGATGTCTGGGTGTATGTACGAAGGCAGGCAGGACACAGCAGTaGACCAAGAGCGGCAGTGGA +
Preference number: 4 (lower is better)
Translates to: HTHVRPPCSGCLGVCTKAGRTQQ*TKSGSG
Trigger: TCCACTGCCGCTCTTGGTTCACTGCTGTGTCCTGCC...TGCCTTCGTACATACACCCAGACATCCTGAGCAAGGGGGACGCACATGTGTGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp ATGCGGGCAGTGTGGGTGCTGAGCTGCTGGAGGAGTAGCTCTCCACTCCCTGACAAGCTCCCAGCAAGTTaGCAAAAAGAAGGGGGAGGT +
Preference number: 4 (lower is better)
Translates to: MRAVWVLSCWRSSSPLPDKLPAS*QKEGGG
Trigger: ACCTCCCCCTTCTTTTTGTCAACTTGCTGGGAGCTT...GTCAGGGAGTGGAGAGCTACTCCTCCAGCAGCTCAGCACCCACACTGCCCGCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp GTATGCCACAATCACTCGGGATCTGGTCCCGGTGGCCACACGCATGCGGGCAGTGTCCTCTGTCTGGTGTaGGACACCCCTTTCTCTATT +
Preference number: 4 (lower is better)
Translates to: VCHNHSGSGPGGHTHAGSVLCLV*DTPFSI
Trigger: AATAGAGAAAGGGGTGTCTCACACCAGACAGAGGAC...ACTGCCCGCATGCGTGTGGCCACCGGGACCAGATCCCGAGTGATTGTGGCATAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp GATCTGGTCCCGGTGGCCACACGCATGCGGGCAGTGTGGGTGCTGAGCTGCTGGAAAGTTAACAGCCTATaGGCTTCTAGTTTCTGCGAG +
Preference number: 4 (lower is better)
Translates to: DLVPVATRMRAVWVLSCWKVNSL*ASSFCE
Trigger: CTCGCAGAAACTAGAAGCTCATAGGCTGTTAACTTT...CCAGCAGCTCAGCACCCACACTGCCCGCATGCGTGTGGCCACCGGGACCAGATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp ATGCGGGCAGTGTGGGTGCTGAGCTGCTGGAGGAGTAGCTCTCCACTCCCTGACCTCCCTGTGTCTTCCTaGATGAAGCTGAAGGAATCG +
Preference number: 4 (lower is better)
Translates to: MRAVWVLSCWRSSSPLPDLPVSS*MKLKES
Trigger: CGATTCCTTCAGCTTCATTCAGGAAGACACAGGGAG...GTCAGGGAGTGGAGAGCTACTCCTCCAGCAGCTCAGCACCCACACTGCCCGCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp GATCTGGTCCCGGTGGCCACACGCATGCGGGCAGTGTGGGTGCTGAGCTGCTGGAAAAGGATAATCCACTaGTGTCAGAAAGGAGAGAGG +
Preference number: 4 (lower is better)
Translates to: DLVPVATRMRAVWVLSCWKRIIH*CQKGER
Trigger: CCTCTCTCCTTTCTGACATCAGTGGATTATCCTTTT...CCAGCAGCTCAGCACCCACACTGCCCGCATGCGTGTGGCCACCGGGACCAGATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp ATGCGGGCAGTGTGGGTGCTGAGCTGCTGGAGGAGTAGCTCTCCACTCCCTGACCCTCCTGCGTCTCTGTaGAGTGACTCCCATTATTCA +
Preference number: 4 (lower is better)
Translates to: MRAVWVLSCWRSSSPLPDPPASL*SDSHYS
Trigger: TGAATAATGGGAGTCACTTCACAGAGACGCAGGAGG...GTCAGGGAGTGGAGAGCTACTCCTCCAGCAGCTCAGCACCCACACTGCCCGCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp ATGCGGGCAGTGTGGGTGCTGAGCTGCTGGAGGAGTAGCTCTCCACTCCCTGACTGTTCCCTGGATGTCTaGCCTACTGTGCTAACCTGT +
Preference number: 4 (lower is better)
Translates to: MRAVWVLSCWRSSSPLPDCSLDV*PTVLTC
Trigger: ACAGGTTAGCACAGTAGGTCAGACATCCAGGGAACA...GTCAGGGAGTGGAGAGCTACTCCTCCAGCAGCTCAGCACCCACACTGCCCGCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp ACTTTCAGGTCAGCACGAGTGAAGCGTGGTTTCCTGAGCTTGAAGGGCTCTGAACCTCCCGTTTCGCCTTaGAGCAGCACGGGGACCCCA +
Preference number: 4 (lower is better)
Translates to: TFRSARVKRGFLSLKGSEPPVSP*SSTGTP
Trigger: TGGGGTCCCCGTGCTGCTGCAAGGCGAAACGGGAGG...TTCAGAGCCCTTCAAGCTCAGGAAACCACGCTTCACTCGTGCTGACCTGAAAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301923.13
CDS-3UTR GCA 90 bp AACTGCAGGCCCCCTGGAATTTACCTGGCCATCAGACCTGCCAGCAACAGTGGCGACGGTGGAGGGGGCTaGCCACGTTTTAGTAACACT +
Preference number: 4 (lower is better)
Translates to: NCRPPGIYLAIRPASNSGDGGGG*PRFSNT
Trigger: AGTGTTACTAAAACGTGGGCAGCCCCCTCCACCGTC...GCCACTGTTGCTGGCAGGTCTGATGGCCAGGTAAATTCCAGGGGGCCTGCAGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp AATGAAGCTGAAGGAATCGAGTGGGAGGGACTGTTCTCCTCTTTGGGGGAGCTCTGGGTTTGCTCCAGGTaGTGTGCAGGGAGGAGGCCC +
Preference number: 4 (lower is better)
Translates to: NEAEGIEWEGLFSSLGELWVCSR*CAGRRP
Trigger: GGGCCTCCTCCCTGCACAGCACCTGGAGCAAACCCA...GAGCTCCCCCAAAGAGGAGAACAGTCCCTCCCACTCGATTCCTTCAGCTTCATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp ATGCGGGCAGTGTGGGTGCTGAGCTGCTGGAGGAGTAGCTCTCCACTCCCTGACTGGTTCTGTAACAACTaGTGCTGTTGCTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: MRAVWVLSCWRSSSPLPDWFCNN*CCCCCC
Trigger: GCAGCAGCAGCAACAGCAGCAGTTGTTACAGAACCA...GTCAGGGAGTGGAGAGCTACTCCTCCAGCAGCTCAGCACCCACACTGCCCGCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp AACTGCAGGCCCCCTGGAATTTACCTGGCCATCAGACCTGCCAGCAACAGTGGCACCATTCGAGCCAGCTaGTGCTCTTGCTGTTGGCGT +
Preference number: 4 (lower is better)
Translates to: NCRPPGIYLAIRPASNSGTIRAS*CSCCWR
Trigger: ACGCCAACAGCAAGAGCAGCAGCTGGCTCGAATGGT...GCCACTGTTGCTGGCAGGTCTGATGGCCAGGTAAATTCCAGGGGGCCTGCAGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp CAAAGGGTAAAAGCGTGCTGCCCGCTCTGCACACGGCAGAAGCTGGAAAATGCCCCTTCCCACCAACCATaGCATAGTCCATGCCGCCAG +
Preference number: 4 (lower is better)
Translates to: QRVKACCPLCTRQKLENAPSHQP*HSPCRQ
Trigger: CTGGCGGCATGGACTATGGCATGGTTGGTGGGAAGG...GGCATTTTCCAGCTTCTGCCGTGTGCAGAGCGGGCAGCACGCTTTTACCCTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp ATGCGGGCAGTGTGGGTGCTGAGCTGCTGGAGGAGTAGCTCTCCACTCCCTGACATCGGATCAGGGCAGTaGCCTGGGTTAGATTCAGAT +
Preference number: 4 (lower is better)
Translates to: MRAVWVLSCWRSSSPLPDIGSGQ*PGLDSD
Trigger: ATCTGAATCTAACCCAGGGCACTGCCCTGATCCGAT...GTCAGGGAGTGGAGAGCTACTCCTCCAGCAGCTCAGCACCCACACTGCCCGCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp ACTAAAGCGGTTTTAGAGAAATTGCAGGCAGCAACCCCACCCACTCCCTTTACCGCGCTGCTGCTCCACTaGCCGAGCCCAGTGGACCCA +
Preference number: 4 (lower is better)
Translates to: TKAVLEKLQAATPPTPFTALLLH*PSPVDP
Trigger: TGGGTCCACTGGGCTCGGGCAGTGGAGCAGCAGCGC...GGTAAAGGGAGTGGGTGGGGTTGCTGCCTGCAATTTCTCTAAAACCGCTTTAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp GTATGCCACAATCACTCGGGATCTGGTCCCGGTGGCCACACGCATGCGGGCAGTGCAGACTGTCAGCGATaGAGCTTTCTGAGAAGTCAG +
Preference number: 4 (lower is better)
Translates to: VCHNHSGSGPGGHTHAGSADCQR*SFLRSQ
Trigger: CTGACTTCTCAGAAAGCTGCATCGCTGACAGTCTGC...ACTGCCCGCATGCGTGTGGCCACCGGGACCAGATCCCGAGTGATTGTGGCATAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp CACACACATGTGCGTCCCCCTTGCTCAGGATGTCTGGGTGTATGTACGAAGGCATCAGTGATGGCCTGGTaGTGTAACGCGCCACGGCCT +
Preference number: 4 (lower is better)
Translates to: HTHVRPPCSGCLGVCTKASVMAW*CNAPRP
Trigger: AGGCCGTGGCGCGTTACAGCACCAGGCCATCACTGA...TGCCTTCGTACATACACCCAGACATCCTGAGCAAGGGGGACGCACATGTGTGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp GTATGCCACAATCACTCGGGATCTGGTCCCGGTGGCCACACGCATGCGGGCAGTCCCACAGAGGGCTCATaGAGGCTTGTATATGTGAAC +
Preference number: 4 (lower is better)
Translates to: VCHNHSGSGPGGHTHAGSPTEGS*RLVYVN
Trigger: GTTCACATATACAAGCCTGCATGAGCCCTCTGTGGG...ACTGCCCGCATGCGTGTGGCCACCGGGACCAGATCCCGAGTGATTGTGGCATAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp CACACACATGTGCGTCCCCCTTGCTCAGGATGTCTGGGTGTATGTACGAAGGCAGCGGTCAGTGGGGGCTaGTGGAAGCAGAGCTTTTGC +
Preference number: 4 (lower is better)
Translates to: HTHVRPPCSGCLGVCTKAAVSGG*WKQSFC
Trigger: GCAAAAGCTCTGCTTCCAGCAGCCCCCACTGACCGC...TGCCTTCGTACATACACCCAGACATCCTGAGCAAGGGGGACGCACATGTGTGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp CAAAGGGTAAAAGCGTGCTGCCCGCTCTGCACACGGCAGAAGCTGGAAAATGCCCGCACGACAGCACTTTaGTCCACACAGAGAGCGGTC +
Preference number: 4 (lower is better)
Translates to: QRVKACCPLCTRQKLENARTTAL*STQRAV
Trigger: GACCGCTCTCTGTGTGGAGCAAAGTGCTGTCGTGCG...GGCATTTTCCAGCTTCTGCCGTGTGCAGAGCGGGCAGCACGCTTTTACCCTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp GATCTGGTCCCGGTGGCCACACGCATGCGGGCAGTGTGGGTGCTGAGCTGCTGGACATCCTGTTTACTCTaGAGAGAAAAACAGGCTTGG +
Preference number: 4 (lower is better)
Translates to: DLVPVATRMRAVWVLSCWTSCLL*REKQAW
Trigger: CCAAGCCTGTTTTTCTCTGCAGAGTAAACAGGATGT...CCAGCAGCTCAGCACCCACACTGCCCGCATGCGTGTGGCCACCGGGACCAGATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp ATGCGGGCAGTGTGGGTGCTGAGCTGCTGGAGGAGTAGCTCTCCACTCCCTGACTTGGTTGACAGGAACTaGAGGCCCCCTGGAATTTAC +
Preference number: 4 (lower is better)
Translates to: MRAVWVLSCWRSSSPLPDLVDRN*RPPGIY
Trigger: GTAAATTCCAGGGGGCCTGCAGTTCCTGTCAACCAA...GTCAGGGAGTGGAGAGCTACTCCTCCAGCAGCTCAGCACCCACACTGCCCGCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp GTATGCCACAATCACTCGGGATCTGGTCCCGGTGGCCACACGCATGCGGGCAGTTTGGTTGACAGGAACTaGAGGCCCCCTGGAATTTAC +
Preference number: 4 (lower is better)
Translates to: VCHNHSGSGPGGHTHAGSLVDRN*RPPGIY
Trigger: GTAAATTCCAGGGGGCCTGCAGTTCCTGTCAACCAA...ACTGCCCGCATGCGTGTGGCCACCGGGACCAGATCCCGAGTGATTGTGGCATAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp GTATGCCACAATCACTCGGGATCTGGTCCCGGTGGCCACACGCATGCGGGCAGTACCCTGGCACTAGATTaGTGGAAGAGATGGCAGCTA +
Preference number: 4 (lower is better)
Translates to: VCHNHSGSGPGGHTHAGSTLALD*WKRWQL
Trigger: TAGCTGCCATCTCTTCCAGCAATCTAGTGCCAGGGT...ACTGCCCGCATGCGTGTGGCCACCGGGACCAGATCCCGAGTGATTGTGGCATAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp ATGCGGGCAGTGTGGGTGCTGAGCTGCTGGAGGAGTAGCTCTCCACTCCCTGACACCCTGCTTCATGGGTaGCCAAATCTAGGCAAGCAA +
Preference number: 4 (lower is better)
Translates to: MRAVWVLSCWRSSSPLPDTLLHG*PNLGKQ
Trigger: TTGCTTGCCTAGATTTGGGCACCCATGAAGCAGGGT...GTCAGGGAGTGGAGAGCTACTCCTCCAGCAGCTCAGCACCCACACTGCCCGCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp GATCTGGTCCCGGTGGCCACACGCATGCGGGCAGTGTGGGTGCTGAGCTGCTGGAAGATTCAGTGTCTTTaGTGGCAATACAAGGCCACT +
Preference number: 4 (lower is better)
Translates to: DLVPVATRMRAVWVLSCWKIQCL*WQYKAT
Trigger: AGTGGCCTTGTATTGCCAGCAAAGACACTGAATCTT...CCAGCAGCTCAGCACCCACACTGCCCGCATGCGTGTGGCCACCGGGACCAGATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp CAAAGGGTAAAAGCGTGCTGCCCGCTCTGCACACGGCAGAAGCTGGAAAATGCCAGCTGCCAATTGGGCTaGCGGCCGTTGGTTGGCTTA +
Preference number: 4 (lower is better)
Translates to: QRVKACCPLCTRQKLENASCQLG*RPLVGL
Trigger: TAAGCCAACCAACGGCCGCCAGCCCAATTGGCAGCT...GGCATTTTCCAGCTTCTGCCGTGTGCAGAGCGGGCAGCACGCTTTTACCCTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp CACACACATGTGCGTCCCCCTTGCTCAGGATGTCTGGGTGTATGTACGAAGGCATGGAGAGCTGCCAATTaGGCTGGCGGCCGTTGGTTG +
Preference number: 4 (lower is better)
Translates to: HTHVRPPCSGCLGVCTKAWRAAN*AGGRWL
Trigger: CAACCAACGGCCGCCAGCCCAATTGGCAGCTCTCCA...TGCCTTCGTACATACACCCAGACATCCTGAGCAAGGGGGACGCACATGTGTGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp AACTGCAGGCCCCCTGGAATTTACCTGGCCATCAGACCTGCCAGCAACAGTGGCGCCACCATTGACTGGTaGCGATGGAGAGCTGCCAAT +
Preference number: 4 (lower is better)
Translates to: NCRPPGIYLAIRPASNSGATIDW*RWRAAN
Trigger: ATTGGCAGCTCTCCATCGCCACCAGTCAATGGTGGC...GCCACTGTTGCTGGCAGGTCTGATGGCCAGGTAAATTCCAGGGGGCCTGCAGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp ACTTTCAGGTCAGCACGAGTGAAGCGTGGTTTCCTGAGCTTGAAGGGCTCTGAATGGCATTGGGAGCGTTaGCGGGCGTGTTCCCCCAGC +
Preference number: 4 (lower is better)
Translates to: TFRSARVKRGFLSLKGSEWHWER*RACSPS
Trigger: GCTGGGGGAACACGCCCGCCAACGCTCCCAATGCCA...TTCAGAGCCCTTCAAGCTCAGGAAACCACGCTTCACTCGTGCTGACCTGAAAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301923.13
ENST00000454349.7
CDS-3UTR CCA 90 bp CACACACATGTGCGTCCCCCTTGCTCAGGATGTCTGGGTGTATGTACGAAGGCACGAGTGCTTCATGCCTaGCTGCCTCTGCTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: HTHVRPPCSGCLGVCTKARVLHA*LPLLLL
Trigger: CAGCAGCAGCAGAGGCAGCCAGGCATGAAGCACTCG...TGCCTTCGTACATACACCCAGACATCCTGAGCAAGGGGGACGCACATGTGTGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp CACACACATGTGCGTCCCCCTTGCTCAGGATGTCTGGGTGTATGTACGAAGGCACCAGCAGGACCCGTATaGCCACCCAGTGTGTCACCA +
Preference number: 4 (lower is better)
Translates to: HTHVRPPCSGCLGVCTKAPAGPV*PPSVSP
Trigger: TGGTGACACACTGGGTGGCCATACGGGTCCTGCTGG...TGCCTTCGTACATACACCCAGACATCCTGAGCAAGGGGGACGCACATGTGTGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp ATGCGGGCAGTGTGGGTGCTGAGCTGCTGGAGGAGTAGCTCTCCACTCCCTGACTCCTGGTTGGAATTCTaGAGGCCAACTGGCATTGCT +
Preference number: 4 (lower is better)
Translates to: MRAVWVLSCWRSSSPLPDSWLEF*RPTGIA
Trigger: AGCAATGCCAGTTGGCCTCCAGAATTCCAACCAGGA...GTCAGGGAGTGGAGAGCTACTCCTCCAGCAGCTCAGCACCCACACTGCCCGCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp GTATGCCACAATCACTCGGGATCTGGTCCCGGTGGCCACACGCATGCGGGCAGTTTTCCATGGCACTCCTaGTTGGAATTCTGGAGGCCA +
Preference number: 4 (lower is better)
Translates to: VCHNHSGSGPGGHTHAGSFPWHS*LEFWRP
Trigger: TGGCCTCCAGAATTCCAACCAGGAGTGCCATGGAAA...ACTGCCCGCATGCGTGTGGCCACCGGGACCAGATCCCGAGTGATTGTGGCATAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp CCGGCACCTCCACACTCTCCACACTCGAGACTTGCAGATGCACGTGTGACGGTGAGGGAGATGATGGTTTaGGGTTGGTCAGACCAGGAG +
Preference number: 4 (lower is better)
Translates to: PAPPHSPHSRLADARVTVREMMV*GWSDQE
Trigger: CTCCTGGTCTGACCAACCCCAAACCATCATCTCCCT...CACCGTCACACGTGCATCTGCAAGTCTCGAGTGTGGAGAGTGTGGAGGTGCCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR CCA 90 bp ATGCGGGCAGTGTGGGTGCTGAGCTGCTGGAGGAGTAGCTCTCCACTCCCTGACCTTGGGATATGCTCCTaGCCCAGGGACACTAAGATT +
Preference number: 4 (lower is better)
Translates to: MRAVWVLSCWRSSSPLPDLGICS*PRDTKI
Trigger: AATCTTAGTGTCCCTGGGCCAGGAGCATATCCCAAG...GTCAGGGAGTGGAGAGCTACTCCTCCAGCAGCTCAGCACCCACACTGCCCGCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp CCCCTGTCTCCTCTCCCAAGTCCCAGAATCTCTTCCACTCAACTCTACACTGTGGGCTCGCAGGAGCCTTaGGATATGCTCCTGGCCCAG +
Preference number: 4 (lower is better)
Translates to: PLSPLPSPRISSTQLYTVGSQEP*DMLLAQ
Trigger: CTGGGCCAGGAGCATATCCCAAGGCTCCTGCGAGCC...CACAGTGTAGAGTTGAGTGGAAGAGATTCTGGGACTTGGGAGAGGAGACAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp ATGCGGGCAGTGTGGGTGCTGAGCTGCTGGAGGAGTAGCTCTCCACTCCCTGACCATCTGTGGAGTGACTaGACCACACACACACACATG +
Preference number: 4 (lower is better)
Translates to: MRAVWVLSCWRSSSPLPDHLWSD*TTHTHM
Trigger: CATGTGTGTGTGTGTGGTCCAGTCACTCCACAGATG...GTCAGGGAGTGGAGAGCTACTCCTCCAGCAGCTCAGCACCCACACTGCCCGCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp CAAAGGGTAAAAGCGTGCTGCCCGCTCTGCACACGGCAGAAGCTGGAAAATGCCTGGGTGCTGAGCTGCTaGAGGAGTAGCTCTCCACTC +
Preference number: 4 (lower is better)
Translates to: QRVKACCPLCTRQKLENAWVLSC*RSSSPL
Trigger: GAGTGGAGAGCTACTCCTCCAGCAGCTCAGCACCCA...GGCATTTTCCAGCTTCTGCCGTGTGCAGAGCGGGCAGCACGCTTTTACCCTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp ACTAAAGCGGTTTTAGAGAAATTGCAGGCAGCAACCCCACCCACTCCCTTTACCGGGATCTGGTCCCGGTaGCCACACGCATGCGGGCAG +
Preference number: 4 (lower is better)
Translates to: TKAVLEKLQAATPPTPFTGIWSR*PHACGQ
Trigger: CTGCCCGCATGCGTGTGGCCACCGGGACCAGATCCC...GGTAAAGGGAGTGGGTGGGGTTGCTGCCTGCAATTTCTCTAAAACCGCTTTAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp GTATGCCACAATCACTCGGGATCTGGTCCCGGTGGCCACACGCATGCGGGCAGTGACACGGGGACACCATaGACACAGAAACTGAAGAAC +
Preference number: 4 (lower is better)
Translates to: VCHNHSGSGPGGHTHAGSDTGTP*TQKLKN
Trigger: GTTCTTCAGTTTCTGTGTCCATGGTGTCCCCGTGTC...ACTGCCCGCATGCGTGTGGCCACCGGGACCAGATCCCGAGTGATTGTGGCATAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp GATCTGGTCCCGGTGGCCACACGCATGCGGGCAGTGTGGGTGCTGAGCTGCTGGATCAGCAAAGCCCTTTaGGAGCATTGTACAAGAGAT +
Preference number: 4 (lower is better)
Translates to: DLVPVATRMRAVWVLSCWISKAL*EHCTRD
Trigger: ATCTCTTGTACAATGCTCCCAAAGGGCTTTGCTGAT...CCAGCAGCTCAGCACCCACACTGCCCGCATGCGTGTGGCCACCGGGACCAGATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp ATGCGGGCAGTGTGGGTGCTGAGCTGCTGGAGGAGTAGCTCTCCACTCCCTGACTTGACTGCTGTTCCCTaGATGTCTGACCTACTGTGC +
Preference number: 4 (lower is better)
Translates to: MRAVWVLSCWRSSSPLPDLTAVP*MSDLLC
Trigger: GCACAGTAGGTCAGACATCCAGGGAACAGCAGTCAA...GTCAGGGAGTGGAGAGCTACTCCTCCAGCAGCTCAGCACCCACACTGCCCGCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp CACACACATGTGCGTCCCCCTTGCTCAGGATGTCTGGGTGTATGTACGAAGGCAGCCTGGGCATTGCCTTaGTTTTCAGGGAGGGGGTGG +
Preference number: 4 (lower is better)
Translates to: HTHVRPPCSGCLGVCTKAAWALP*FSGRGW
Trigger: CCACCCCCTCCCTGAAAACCAAGGCAATGCCCAGGC...TGCCTTCGTACATACACCCAGACATCCTGAGCAAGGGGGACGCACATGTGTGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp AACTGCAGGCCCCCTGGAATTTACCTGGCCATCAGACCTGCCAGCAACAGTGGCTTTGATTGCTTTGGCTaGGTGCATCTCCCCAGCCCC +
Preference number: 4 (lower is better)
Translates to: NCRPPGIYLAIRPASNSGFDCFG*VHLPSP
Trigger: GGGGCTGGGGAGATGCACCCAGCCAAAGCAATCAAA...GCCACTGTTGCTGGCAGGTCTGATGGCCAGGTAAATTCCAGGGGGCCTGCAGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp GTATGCCACAATCACTCGGGATCTGGTCCCGGTGGCCACACGCATGCGGGCAGTACCCCTGATCCTTGCTaGGATTCTCATTCCAAGAGG +
Preference number: 4 (lower is better)
Translates to: VCHNHSGSGPGGHTHAGSTPDPC*DSHSKR
Trigger: CCTCTTGGAATGAGAATCCCAGCAAGGATCAGGGGT...ACTGCCCGCATGCGTGTGGCCACCGGGACCAGATCCCGAGTGATTGTGGCATAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp ATGCGGGCAGTGTGGGTGCTGAGCTGCTGGAGGAGTAGCTCTCCACTCCCTGACGTTTATTCCAGGAATTaGGCTGTCGGCCCGTCTCAT +
Preference number: 4 (lower is better)
Translates to: MRAVWVLSCWRSSSPLPDVYSRN*AVGPSH
Trigger: ATGAGACGGGCCGACAGCCCAATTCCTGGAATAAAC...GTCAGGGAGTGGAGAGCTACTCCTCCAGCAGCTCAGCACCCACACTGCCCGCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp CAAAGGGTAAAAGCGTGCTGCCCGCTCTGCACACGGCAGAAGCTGGAAAATGCCGCCCGCTGCTCCAGCTaGAATTGGAAGGTCGAACGT +
Preference number: 4 (lower is better)
Translates to: QRVKACCPLCTRQKLENAARCSS*NWKVER
Trigger: ACGTTCGACCTTCCAATTCCAGCTGGAGCAGCGGGC...GGCATTTTCCAGCTTCTGCCGTGTGCAGAGCGGGCAGCACGCTTTTACCCTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp CCTCCACACTCTCCACACTCGAGACTTGCAGATGCACGTGTGACGGTGCCATTCGCCCGCTGCTCCAGCTaGAATTGGAAGGTCGAACGT +
Preference number: 4 (lower is better)
Translates to: PPHSPHSRLADARVTVPFARCSS*NWKVER
Trigger: ACGTTCGACCTTCCAATTCCAGCTGGAGCAGCGGGC...GAATGGCACCGTCACACGTGCATCTGCAAGTCTCGAGTGTGGAGAGTGTGGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR TCA 90 bp GTATGCCACAATCACTCGGGATCTGGTCCCGGTGGCCACACGCATGCGGGCAGTCAAAAATACTGCCTTTaGCAGTACCTGGGGCAACAC +
Preference number: 4 (lower is better)
Translates to: VCHNHSGSGPGGHTHAGSQKYCL*QYLGQH
Trigger: GTGTTGCCCCAGGTACTGTCAAAGGCAGTATTTTTG...ACTGCCCGCATGCGTGTGGCCACCGGGACCAGATCCCGAGTGATTGTGGCATAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000301923.13
CDS-3UTR TCA 90 bp CCCCTGTCTCCTCTCCCAAGTCCCAGAATCTCTTCCACTCAACTCTACACTGTGGAGGAAGCACTGCCCTaGGAGCCAGTGGTGTTCCAG +
Preference number: 4 (lower is better)
Translates to: PLSPLPSPRISSTQLYTVEEALP*EPVVFQ
Trigger: CTGGAACACCACTGGCTCTCAGGGCAGTGCTTCCTC...CACAGTGTAGAGTTGAGTGGAAGAGATTCTGGGACTTGGGAGAGGAGACAGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp CACACACATGTGCGTCCCCCTTGCTCAGGATGTCTGGGTGTATGTACGAAGGCAACTGGGGCCCCACATTaGAAAGACCTGGACTCAGGC +
Preference number: 4 (lower is better)
Translates to: HTHVRPPCSGCLGVCTKATGAPH*KDLDSG
Trigger: GCCTGAGTCCAGGTCTTTTCAATGTGGGGCCCCAGT...TGCCTTCGTACATACACCCAGACATCCTGAGCAAGGGGGACGCACATGTGTGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp ATGCGGGCAGTGTGGGTGCTGAGCTGCTGGAGGAGTAGCTCTCCACTCCCTGACATCTTGTTGGAGAGATaGGTGGGGTTGTGTCCTATG +
Preference number: 4 (lower is better)
Translates to: MRAVWVLSCWRSSSPLPDILLER*VGLCPM
Trigger: CATAGGACACAACCCCACTCATCTCTCCAACAAGAT...GTCAGGGAGTGGAGAGCTACTCCTCCAGCAGCTCAGCACCCACACTGCCCGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp CTTTGGTGGAAAAGACCCGGCACCTCCACACTCTCCACACTCGAGACTTGCAGAGCTGCTCCAGGGAGATaGTGGTTTGGGGTTGGTCAG +
Preference number: 4 (lower is better)
Translates to: LWWKRPGTSTLSTLETCRAAPGR*WFGVGQ
Trigger: CTGACCAACCCCAAACCATCATCTCCCTGGAGCAGC...TCTGCAAGTCTCGAGTGTGGAGAGTGTGGAGGTGCCGGGTCTTTTCCACCAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR TCA 90 bp AATGAAGCTGAAGGAATCGAGTGGGAGGGACTGTTCTCCTCTTTGGGGGAGCTCGGCAGGACACAGCAGTaGACCAAGAGCGGCAGTGGA +
Preference number: 4 (lower is better)
Translates to: NEAEGIEWEGLFSSLGELGRTQQ*TKSGSG
Trigger: TCCACTGCCGCTCTTGGTTCACTGCTGTGTCCTGCC...GAGCTCCCCCAAAGAGGAGAACAGTCCCTCCCACTCGATTCCTTCAGCTTCATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp ATGCGGGCAGTGTGGGTGCTGAGCTGCTGGAGGAGTAGCTCTCCACTCCCTGACAGCTCTTCTCTTCCATaGCATCCTCACCATATCCTG +
Preference number: 4 (lower is better)
Translates to: MRAVWVLSCWRSSSPLPDSSSLP*HPHHIL
Trigger: CAGGATATGGTGAGGATGTCATGGAAGAGAAGAGCT...GTCAGGGAGTGGAGAGCTACTCCTCCAGCAGCTCAGCACCCACACTGCCCGCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp CAAAGGGTAAAAGCGTGCTGCCCGCTCTGCACACGGCAGAAGCTGGAAAATGCCGCATCAACAGCAACGTaGTGTGACGCCCATGTGGGA +
Preference number: 4 (lower is better)
Translates to: QRVKACCPLCTRQKLENAASTAT*CDAHVG
Trigger: TCCCACATGGGCGTCACATCACGTTGCTGTTGATGC...GGCATTTTCCAGCTTCTGCCGTGTGCAGAGCGGGCAGCACGCTTTTACCCTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp ATGCGGGCAGTGTGGGTGCTGAGCTGCTGGAGGAGTAGCTCTCCACTCCCTGACCGCATTTTCCATCTTTaGCTGCTGTTCCCTGGATGT +
Preference number: 4 (lower is better)
Translates to: MRAVWVLSCWRSSSPLPDRIFHL*LLFPGC
Trigger: ACATCCAGGGAACAGCAGTCAAAGATGGAAAATGCG...GTCAGGGAGTGGAGAGCTACTCCTCCAGCAGCTCAGCACCCACACTGCCCGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp CTTTGGTGGAAAAGACCCGGCACCTCCACACTCTCCACACTCGAGACTTGCAGAAGGGGGTGGCCCTTTTaGTTGTCCCATGCTCCAGTG +
Preference number: 4 (lower is better)
Translates to: LWWKRPGTSTLSTLETCRRGWPF*LSHAPV
Trigger: CACTGGAGCATGGGACAATCAAAAGGGCCACCCCCT...TCTGCAAGTCTCGAGTGTGGAGAGTGTGGAGGTGCCGGGTCTTTTCCACCAAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR TCA 90 bp ATGCGGGCAGTGTGGGTGCTGAGCTGCTGGAGGAGTAGCTCTCCACTCCCTGACCATCCAGACTTCATTTaGTTGCTTTGGCTGGGTGCA +
Preference number: 4 (lower is better)
Translates to: MRAVWVLSCWRSSSPLPDHPDFI*LLWLGA
Trigger: TGCACCCAGCCAAAGCAATCAAATGAAGTCTGGATG...GTCAGGGAGTGGAGAGCTACTCCTCCAGCAGCTCAGCACCCACACTGCCCGCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp GTATGCCACAATCACTCGGGATCTGGTCCCGGTGGCCACACGCATGCGGGCAGTCATTTTCCGACTAATTaGCTGTGGGGATGGCTCTTC +
Preference number: 4 (lower is better)
Translates to: VCHNHSGSGPGGHTHAGSHFPTN*LWGWLF
Trigger: GAAGAGCCATCCCCACAGTCAATTAGTCGGAAAATG...ACTGCCCGCATGCGTGTGGCCACCGGGACCAGATCCCGAGTGATTGTGGCATAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp ACTAAAGCGGTTTTAGAGAAATTGCAGGCAGCAACCCCACCCACTCCCTTTACCCACCCCCAAGGAGCATaGAGGACGGTGGAGGGGGCT +
Preference number: 4 (lower is better)
Translates to: TKAVLEKLQAATPPTPFTHPQGA*RTVEGA
Trigger: AGCCCCCTCCACCGTCCTGCATGCTCCTTGGGGGTG...GGTAAAGGGAGTGGGTGGGGTTGCTGCCTGCAATTTCTCTAAAACCGCTTTAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp ACTAAAGCGGTTTTAGAGAAATTGCAGGCAGCAACCCCACCCACTCCCTTTACCTTGCTCCAGGTGCTGTaGAGGGAGGAGGCCCTGCCC +
Preference number: 4 (lower is better)
Translates to: TKAVLEKLQAATPPTPFTLLQVL*REEALP
Trigger: GGGCAGGGCCTCCTCCCTGCACAGCACCTGGAGCAA...GGTAAAGGGAGTGGGTGGGGTTGCTGCCTGCAATTTCTCTAAAACCGCTTTAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp CAAAGGGTAAAAGCGTGCTGCCCGCTCTGCACACGGCAGAAGCTGGAAAATGCCTGCGTTGTTTGGGTTTaGTCCAGGTGCTGTGCAGGG +
Preference number: 4 (lower is better)
Translates to: QRVKACCPLCTRQKLENACVVWV*SRCCAG
Trigger: CCCTGCACAGCACCTGGAGCAAACCCAAACAACGCA...GGCATTTTCCAGCTTCTGCCGTGTGCAGAGCGGGCAGCACGCTTTTACCCTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp CACACACATGTGCGTCCCCCTTGCTCAGGATGTCTGGGTGTATGTACGAAGGCAGGCTGCACGGGTGTGTaGAGACCTCTCGATTGTGCT +
Preference number: 4 (lower is better)
Translates to: HTHVRPPCSGCLGVCTKAGCTGV*RPLDCA
Trigger: AGCACAATCGAGAGGTCTGCACACACCCGTGCAGCC...TGCCTTCGTACATACACCCAGACATCCTGAGCAAGGGGGACGCACATGTGTGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp ATGCGGGCAGTGTGGGTGCTGAGCTGCTGGAGGAGTAGCTCTCCACTCCCTGACTTCTGTAACAACTGCTaGTGTTGCTGCTGCTGCAAG +
Preference number: 4 (lower is better)
Translates to: MRAVWVLSCWRSSSPLPDFCNNC*CCCCCK
Trigger: CTTGCAGCAGCAGCAACAGCAGCAGTTGTTACAGAA...GTCAGGGAGTGGAGAGCTACTCCTCCAGCAGCTCAGCACCCACACTGCCCGCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp CCCGGCACCTCCACACTCTCCACACTCGAGACTTGCAGATGCACGTGTGACGGTTGGTTCTGTAACAACTaGTGCTGTTGCTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: PGTSTLSTLETCRCTCDGWFCNN*CCCCCC
Trigger: GCAGCAGCAGCAACAGCAGCAGTTGTTACAGAACCA...ACCGTCACACGTGCATCTGCAAGTCTCGAGTGTGGAGAGTGTGGAGGTGCCGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR GCA 90 bp AACTGCAGGCCCCCTGGAATTTACCTGGCCATCAGACCTGCCAGCAACAGTGGCATTCGAGCCAGCTGCTaGTCTTGCTGTTGGCGTACA +
Preference number: 4 (lower is better)
Translates to: NCRPPGIYLAIRPASNSGIRASC*SCCWRT
Trigger: TGTACGCCAACAGCAAGAGCAGCAGCTGGCTCGAAT...GCCACTGTTGCTGGCAGGTCTGATGGCCAGGTAAATTCCAGGGGGCCTGCAGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp CTCTCCACACTCGAGACTTGCAGATGCACGTGTGACGGTGCCATTCTTCGTATAATGCCTGGCTGCCTCTaGTGCTGCTGCTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: LSTLETCRCTCDGAILRIMPGCL*CCCCCC
Trigger: GCAGCAGCAGCAGCAGCAGCAGAGGCAGCCAGGCAT...TATACGAAGAATGGCACCGTCACACGTGCATCTGCAAGTCTCGAGTGTGGAGAG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR GCA 90 bp CCCGGCACCTCCACACTCTCCACACTCGAGACTTGCAGATGCACGTGTGACGGTGAGCCCCACATTCAATaGGTTGGGTACCATGTTGTC +
Preference number: 4 (lower is better)
Translates to: PGTSTLSTLETCRCTCDGEPHIQ*VGYHVV
Trigger: GACAACATGGTACCCAACGCATTGAATGTGGGGCTC...ACCGTCACACGTGCATCTGCAAGTCTCGAGTGTGGAGAGTGTGGAGGTGCCGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR GCA 90 bp CACACACATGTGCGTCCCCCTTGCTCAGGATGTCTGGGTGTATGTACGAAGGCACTGATCGGGGTGCTGTaGTGCTCCAGGGAGATGATG +
Preference number: 4 (lower is better)
Translates to: HTHVRPPCSGCLGVCTKALIGVL*CSREMM
Trigger: CATCATCTCCCTGGAGCAGCACAGCACCCCGATCAG...TGCCTTCGTACATACACCCAGACATCCTGAGCAAGGGGGACGCACATGTGTGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp GCACCTCCACACTCTCCACACTCGAGACTTGCAGATGCACGTGTGACGGTGCCAGTGGGCCATGCTGCATaGAGATCGTTCTCAAGGTTG +
Preference number: 4 (lower is better)
Translates to: APPHSPHSRLADARVTVPVGHAA*RSFSRL
Trigger: CAACCTTGAGAACGATCTGCATGCAGCATGGCCCAC...TGGCACCGTCACACGTGCATCTGCAAGTCTCGAGTGTGGAGAGTGTGGAGGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR GCA 90 bp CAAAGGGTAAAAGCGTGCTGCCCGCTCTGCACACGGCAGAAGCTGGAAAATGCCGTCAGCAGTGGGCCATaGTGCATGCAGATCGTTCTC +
Preference number: 4 (lower is better)
Translates to: QRVKACCPLCTRQKLENAVSSGP*CMQIVL
Trigger: GAGAACGATCTGCATGCAGCATGGCCCACTGCTGAC...GGCATTTTCCAGCTTCTGCCGTGTGCAGAGCGGGCAGCACGCTTTTACCCTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp ACTTTCAGGTCAGCACGAGTGAAGCGTGGTTTCCTGAGCTTGAAGGGCTCTGAACGCACTTGGGGTTGCTaGAGGTGTAGGGGGCTGAGC +
Preference number: 4 (lower is better)
Translates to: TFRSARVKRGFLSLKGSERTWGC*RCRGLS
Trigger: GCTCAGCCCCCTACACCTGCAGCAACCCCAAGTGCG...TTCAGAGCCCTTCAAGCTCAGGAAACCACGCTTCACTCGTGCTGACCTGAAAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp TCTGAACCAAGAAAGGTTGAGAGCTCCAGGTATTGTGTGGAGAACATTCTGGAGGATCGGCCCCGCTGCTaGCACCAGCGCTGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: SEPRKVESSRYCVENILEDRPRC*HQRCCS
Trigger: GGAGCAGCAGCGCTGGTGGCAGCAGCGGGGCCGATC...CTCCAGAATGTTCTCCACACAATACCTGGAGCTCTCAACCTTTCTTGGTTCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp ATGCGGGCAGTGTGGGTGCTGAGCTGCTGGAGGAGTAGCTCTCCACTCCCTGACAGGGAGGCAACTATGTaGTCAGACAGTCTGTCAATG +
Preference number: 4 (lower is better)
Translates to: MRAVWVLSCWRSSSPLPDREATM*SDSLSM
Trigger: CATTGACAGACTGTCTGAGCACATAGTTGCCTCCCT...GTCAGGGAGTGGAGAGCTACTCCTCCAGCAGCTCAGCACCCACACTGCCCGCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp AATGAAGCTGAAGGAATCGAGTGGGAGGGACTGTTCTCCTCTTTGGGGGAGCTCTCAGTGATGGCCTGGTaGTGTAACGCGCCACGGCCT +
Preference number: 4 (lower is better)
Translates to: NEAEGIEWEGLFSSLGELSVMAW*CNAPRP
Trigger: AGGCCGTGGCGCGTTACAGCACCAGGCCATCACTGA...GAGCTCCCCCAAAGAGGAGAACAGTCCCTCCCACTCGATTCCTTCAGCTTCATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp AACTTTTACAGCCACCCCTCTGGGAGTTGTACACACCTTTCAGTAGCCGAAGGGAGCAGGAAGAGGGCATaGTCAAGGCACCCAGCGGGG +
Preference number: 4 (lower is better)
Translates to: NFYSHPSGSCTHLSVAEGSRKRA*SRHPAG
Trigger: CCCCGCTGGGTGCCTTGAGCATGCCCTCTTCCTGCT...CCCTTCGGCTACTGAAAGGTGTGTACAACTCCCAGAGGGGTGGCTGTAAAAGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp CAAAGGGTAAAAGCGTGCTGCCCGCTCTGCACACGGCAGAAGCTGGAAAATGCCGGACAAAGAAGAGGCTaGATGCAGACCTCCCCTGTC +
Preference number: 4 (lower is better)
Translates to: QRVKACCPLCTRQKLENAGQRRG*MQTSPV
Trigger: GACAGGGGAGGTCTGCATGCAGCCTCTTCTTTGTCC...GGCATTTTCCAGCTTCTGCCGTGTGCAGAGCGGGCAGCACGCTTTTACCCTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp ATGCGGGCAGTGTGGGTGCTGAGCTGCTGGAGGAGTAGCTCTCCACTCCCTGACCCTAGACCAGAGCAATaGAGGCGCTATGATTCATCA +
Preference number: 4 (lower is better)
Translates to: MRAVWVLSCWRSSSPLPDPRPEQ*RRYDSS
Trigger: TGATGAATCATAGCGCCTGCATTGCTCTGGTCTAGG...GTCAGGGAGTGGAGAGCTACTCCTCCAGCAGCTCAGCACCCACACTGCCCGCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp AATGAAGCTGAAGGAATCGAGTGGGAGGGACTGTTCTCCTCTTTGGGGGAGCTCCCCCTCCAACACAAATaGAAACCGGCTCCCCCGACC +
Preference number: 4 (lower is better)
Translates to: NEAEGIEWEGLFSSLGELPLQHK*KPAPPT
Trigger: GGTCGGGGGAGCCGGTTTGCATTTGTGTTGGAGGGG...GAGCTCCCCCAAAGAGGAGAACAGTCCCTCCCACTCGATTCCTTCAGCTTCATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp GTATGCCACAATCACTCGGGATCTGGTCCCGGTGGCCACACGCATGCGGGCAGTTCTTTCGATCTCCAGTaGTTTGTGAAGGGGCATCAG +
Preference number: 4 (lower is better)
Translates to: VCHNHSGSGPGGHTHAGSSFDLQ*FVKGHQ
Trigger: CTGATGCCCCTTCACAAAGCACTGGAGATCGAAAGA...ACTGCCCGCATGCGTGTGGCCACCGGGACCAGATCCCGAGTGATTGTGGCATAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp CCGGCACCTCCACACTCTCCACACTCGAGACTTGCAGATGCACGTGTGACGGTGAAGCTAGGCTTGCATTaGCACCATTACCCCAAGTCC +
Preference number: 4 (lower is better)
Translates to: PAPPHSPHSRLADARVTVKLGLH*HHYPKS
Trigger: GGACTTGGGGTAATGGTGGCAATGCAAGCCTAGCTT...CACCGTCACACGTGCATCTGCAAGTCTCGAGTGTGGAGAGTGTGGAGGTGCCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR GCA 90 bp CACACACATGTGCGTCCCCCTTGCTCAGGATGTCTGGGTGTATGTACGAAGGCACTCATCCTTAGGTGTTaGAGGCTGTGGCCCGCTGCT +
Preference number: 4 (lower is better)
Translates to: HTHVRPPCSGCLGVCTKALILRC*RLWPAA
Trigger: AGCAGCGGGCCACAGCCTGCAACACCTAAGGATGAG...TGCCTTCGTACATACACCCAGACATCCTGAGCAAGGGGGACGCACATGTGTGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp CCCGGCACCTCCACACTCTCCACACTCGAGACTTGCAGATGCACGTGTGACGGTATGATCTCAGCTCACTaGAACCTCTGCTTCCCAGGT +
Preference number: 4 (lower is better)
Translates to: PGTSTLSTLETCRCTCDGMISAH*NLCFPG
Trigger: ACCTGGGAAGCAGAGGTTGCAGTGAGCTGAGATCAT...ACCGTCACACGTGCATCTGCAAGTCTCGAGTGTGGAGAGTGTGGAGGTGCCGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR CCA 90 bp AACTGCAGGCCCCCTGGAATTTACCTGGCCATCAGACCTGCCAGCAACAGTGGCATTGACTGGTGGCGATaGAGAGCTGCCAATTGGGCT +
Preference number: 4 (lower is better)
Translates to: NCRPPGIYLAIRPASNSGIDWWR*RAANWA
Trigger: AGCCCAATTGGCAGCTCTCCATCGCCACCAGTCAAT...GCCACTGTTGCTGGCAGGTCTGATGGCCAGGTAAATTCCAGGGGGCCTGCAGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp CACACACATGTGCGTCCCCCTTGCTCAGGATGTCTGGGTGTATGTACGAAGGCAGTTGCCACCATTGACTaGTGGCGATGGAGAGCTGCC +
Preference number: 4 (lower is better)
Translates to: HTHVRPPCSGCLGVCTKAVATID*WRWRAA
Trigger: GGCAGCTCTCCATCGCCACCAGTCAATGGTGGCAAC...TGCCTTCGTACATACACCCAGACATCCTGAGCAAGGGGGACGCACATGTGTGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp ACTTTCAGGTCAGCACGAGTGAAGCGTGGTTTCCTGAGCTTGAAGGGCTCTGAAGAGCATGCAGGACGGTaGAGGGGGCTGCCCACGTTT +
Preference number: 4 (lower is better)
Translates to: TFRSARVKRGFLSLKGSEEHAGR*RGLPTF
Trigger: AAACGTGGGCAGCCCCCTCCACCGTCCTGCATGCTC...TTCAGAGCCCTTCAAGCTCAGGAAACCACGCTTCACTCGTGCTGACCTGAAAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp CCGGCACCTCCACACTCTCCACACTCGAGACTTGCAGATGCACGTGTGACGGTGAAACTGGGGAATTTGTaGAAGCTGGCTCAGCATGGC +
Preference number: 4 (lower is better)
Translates to: PAPPHSPHSRLADARVTVKLGNL*KLAQHG
Trigger: GCCATGCTGAGCCAGCTTCCACAAATTCCCCAGTTT...CACCGTCACACGTGCATCTGCAAGTCTCGAGTGTGGAGAGTGTGGAGGTGCCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR CCA 90 bp CCCGGCACCTCCACACTCTCCACACTCGAGACTTGCAGATGCACGTGTGACGGTTTTCCATGGCACTCCTaGTTGGAATTCTGGAGGCCA +
Preference number: 4 (lower is better)
Translates to: PGTSTLSTLETCRCTCDGFPWHS*LEFWRP
Trigger: TGGCCTCCAGAATTCCAACCAGGAGTGCCATGGAAA...ACCGTCACACGTGCATCTGCAAGTCTCGAGTGTGGAGAGTGTGGAGGTGCCGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR CCA 90 bp CACACACATGTGCGTCCCCCTTGCTCAGGATGTCTGGGTGTATGTACGAAGGCACCCCAGCACACTTCCTaGGGTGACATAGGGGTCAGA +
Preference number: 4 (lower is better)
Translates to: HTHVRPPCSGCLGVCTKAPQHTS*GDIGVR
Trigger: TCTGACCCCTATGTCACCCCAGGAAGTGTGCTGGGG...TGCCTTCGTACATACACCCAGACATCCTGAGCAAGGGGGACGCACATGTGTGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp CCCGGCACCTCCACACTCTCCACACTCGAGACTTGCAGATGCACGTGTGACGGTGGTCAGTATCTACAATaGGAGATGTGGCTGTACCCC +
Preference number: 4 (lower is better)
Translates to: PGTSTLSTLETCRCTCDGGQYLQ*EMWLYP
Trigger: GGGGTACAGCCACATCTCCCATTGTAGATACTGACC...ACCGTCACACGTGCATCTGCAAGTCTCGAGTGTGGAGAGTGTGGAGGTGCCGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR CCA 90 bp CACACACATGTGCGTCCCCCTTGCTCAGGATGTCTGGGTGTATGTACGAAGGCATGGCCGCCTCCTGTTTaGTGCTGTATCGGATCAGGG +
Preference number: 4 (lower is better)
Translates to: HTHVRPPCSGCLGVCTKAWPPPV*CCIGSG
Trigger: CCCTGATCCGATACAGCACCAAACAGGAGGCGGCCA...TGCCTTCGTACATACACCCAGACATCCTGAGCAAGGGGGACGCACATGTGTGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp CCCCTGTCTCCTCTCCCAAGTCCCAGAATCTCTTCCACTCAACTCTACACTGTGGTGCAGTTTGGGCCTTaGCCGCCTCCTGTTTGGTGC +
Preference number: 4 (lower is better)
Translates to: PLSPLPSPRISSTQLYTVVQFGP*PPPVWC
Trigger: GCACCAAACAGGAGGCGGCCAAGGCCCAAACTGCAC...CACAGTGTAGAGTTGAGTGGAAGAGATTCTGGGACTTGGGAGAGGAGACAGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp AATGAAGCTGAAGGAATCGAGTGGGAGGGACTGTTCTCCTCTTTGGGGGAGCTCGGGCTGCCCATCCTATaGGGATCTTCCACCGTTGGG +
Preference number: 4 (lower is better)
Translates to: NEAEGIEWEGLFSSLGELGLPIL*GSSTVG
Trigger: CCCAACGGTGGAAGATCCCCATAGGATGGGCAGCCC...GAGCTCCCCCAAAGAGGAGAACAGTCCCTCCCACTCGATTCCTTCAGCTTCATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp AACTGCAGGCCCCCTGGAATTTACCTGGCCATCAGACCTGCCAGCAACAGTGGCCAGAACGAGCATGCCTaGGCAGTTACATGTGCCAGA +
Preference number: 4 (lower is better)
Translates to: NCRPPGIYLAIRPASNSGQNEHA*AVTCAR
Trigger: TCTGGCACATGTAACTGCCCAGGCATGCTCGTTCTG...GCCACTGTTGCTGGCAGGTCTGATGGCCAGGTAAATTCCAGGGGGCCTGCAGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp AACTGCAGGCCCCCTGGAATTTACCTGGCCATCAGACCTGCCAGCAACAGTGGCAAAATAAAAAGCAGATaGGCCGGCCAGCCAGCCTGC +
Preference number: 4 (lower is better)
Translates to: NCRPPGIYLAIRPASNSGKIKSR*AGQPAC
Trigger: GCAGGCTGGCTGGCCGGCCCATCTGCTTTTTATTTT...GCCACTGTTGCTGGCAGGTCTGATGGCCAGGTAAATTCCAGGGGGCCTGCAGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp CCCCTGTCTCCTCTCCCAAGTCCCAGAATCTCTTCCACTCAACTCTACACTGTGCTGTCAGTGATGGCCTaGTGCTGTAACGCGCCACGG +
Preference number: 4 (lower is better)
Translates to: PLSPLPSPRISSTQLYTVLSVMA*CCNAPR
Trigger: CCGTGGCGCGTTACAGCACCAGGCCATCACTGACAG...CACAGTGTAGAGTTGAGTGGAAGAGATTCTGGGACTTGGGAGAGGAGACAGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp GTATGCCACAATCACTCGGGATCTGGTCCCGGTGGCCACACGCATGCGGGCAGTCAGCATAATGCAGACTaGGATGTCCACACAAGTGCT +
Preference number: 4 (lower is better)
Translates to: VCHNHSGSGPGGHTHAGSQHNAD*DVHTSA
Trigger: AGCACTTGTGTGGACATCCCAGTCTGCATTATGCTG...ACTGCCCGCATGCGTGTGGCCACCGGGACCAGATCCCGAGTGATTGTGGCATAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp AACTGCAGGCCCCCTGGAATTTACCTGGCCATCAGACCTGCCAGCAACAGTGGCGCTCCCACCAAGGGTTaGAATGGGCAGGTATTTGCT +
Preference number: 4 (lower is better)
Translates to: NCRPPGIYLAIRPASNSGAPTKG*NGQVFA
Trigger: AGCAAATACCTGCCCATTCCAACCCTTGGTGGGAGC...GCCACTGTTGCTGGCAGGTCTGATGGCCAGGTAAATTCCAGGGGGCCTGCAGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp AACTTTTACAGCCACCCCTCTGGGAGTTGTACACACCTTTCAGTAGCCGAAGGGGGCTCGCAGGAGCCTTaGGATATGCTCCTGGCCCAG +
Preference number: 4 (lower is better)
Translates to: NFYSHPSGSCTHLSVAEGGSQEP*DMLLAQ
Trigger: CTGGGCCAGGAGCATATCCCAAGGCTCCTGCGAGCC...CCCTTCGGCTACTGAAAGGTGTGTACAACTCCCAGAGGGGTGGCTGTAAAAGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp ACTAAAGCGGTTTTAGAGAAATTGCAGGCAGCAACCCCACCCACTCCCTTTACCGGACAGGGTCGCCACTaGCTCGCAGGAGCCTTGGGA +
Preference number: 4 (lower is better)
Translates to: TKAVLEKLQAATPPTPFTGQGRH*LAGALG
Trigger: TCCCAAGGCTCCTGCGAGCCAGTGGCGACCCTGTCC...GGTAAAGGGAGTGGGTGGGGTTGCTGCCTGCAATTTCTCTAAAACCGCTTTAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp ACTAAAGCGGTTTTAGAGAAATTGCAGGCAGCAACCCCACCCACTCCCTTTACCCGCATGCGGGCAGTGTaGGTGCTGAGCTGCTGGAGG +
Preference number: 4 (lower is better)
Translates to: TKAVLEKLQAATPPTPFTRMRAV*VLSCWR
Trigger: CCTCCAGCAGCTCAGCACCCACACTGCCCGCATGCG...GGTAAAGGGAGTGGGTGGGGTTGCTGCCTGCAATTTCTCTAAAACCGCTTTAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp CAAAGGGTAAAAGCGTGCTGCCCGCTCTGCACACGGCAGAAGCTGGAAAATGCCGATGTGACGCCCATGTaGGAATGTAATGGCCGCCTC +
Preference number: 4 (lower is better)
Translates to: QRVKACCPLCTRQKLENADVTPM*ECNGRL
Trigger: GAGGCGGCCATTACATTCCCACATGGGCGTCACATC...GGCATTTTCCAGCTTCTGCCGTGTGCAGAGCGGGCAGCACGCTTTTACCCTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp CAAAGGGTAAAAGCGTGCTGCCCGCTCTGCACACGGCAGAAGCTGGAAAATGCCGAACTGCAGGCCCCCTaGAATTTACCTGGCCATCAG +
Preference number: 4 (lower is better)
Translates to: QRVKACCPLCTRQKLENAELQAP*NLPGHQ
Trigger: CTGATGGCCAGGTAAATTCCAGGGGGCCTGCAGTTC...GGCATTTTCCAGCTTCTGCCGTGTGCAGAGCGGGCAGCACGCTTTTACCCTTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp GATCTGGTCCCGGTGGCCACACGCATGCGGGCAGTGTGGGTGCTGAGCTGCTGGGGCAATCTAACAGATTaGAACCCTGATAAGATCATG +
Preference number: 4 (lower is better)
Translates to: DLVPVATRMRAVWVLSCWGNLTD*NPDKIM
Trigger: CATGATCTTATCAGGGTTCCAATCTGTTAGATTGCC...CCAGCAGCTCAGCACCCACACTGCCCGCATGCGTGTGGCCACCGGGACCAGATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp CAAAGGGTAAAAGCGTGCTGCCCGCTCTGCACACGGCAGAAGCTGGAAAATGCCGTGTGGAGAACATTCTaGAGTCCCTGCAGGGGATGG +
Preference number: 4 (lower is better)
Translates to: QRVKACCPLCTRQKLENAVWRTF*SPCRGW
Trigger: CCATCCCCTGCAGGGACTCCAGAATGTTCTCCACAC...GGCATTTTCCAGCTTCTGCCGTGTGCAGAGCGGGCAGCACGCTTTTACCCTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp GATCTGGTCCCGGTGGCCACACGCATGCGGGCAGTGTGGGTGCTGAGCTGCTGGCACTGTTGTTATCGGTaGTGTTTTCGGAAGAAGATT +
Preference number: 4 (lower is better)
Translates to: DLVPVATRMRAVWVLSCWHCCYR*CFRKKI
Trigger: AATCTTCTTCCGAAAACACCACCGATAACAACAGTG...CCAGCAGCTCAGCACCCACACTGCCCGCATGCGTGTGGCCACCGGGACCAGATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp CTCTCCACACTCGAGACTTGCAGATGCACGTGTGACGGTGCCATTCTTCGTATAGAGGAAGCACTGCCCTaGGAGCCAGTGGTGTTCCAG +
Preference number: 4 (lower is better)
Translates to: LSTLETCRCTCDGAILRIEEALP*EPVVFQ
Trigger: CTGGAACACCACTGGCTCTCAGGGCAGTGCTTCCTC...TATACGAAGAATGGCACCGTCACACGTGCATCTGCAAGTCTCGAGTGTGGAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR TCA 90 bp ACTAAAGCGGTTTTAGAGAAATTGCAGGCAGCAACCCCACCCACTCCCTTTACCGCAGGTGTAGGGGGCTaGGCTTGTGCCAGAAAGCGG +
Preference number: 4 (lower is better)
Translates to: TKAVLEKLQAATPPTPFTAGVGG*ACARKR
Trigger: CCGCTTTCTGGCACAAGCTCAGCCCCCTACACCTGC...GGTAAAGGGAGTGGGTGGGGTTGCTGCCTGCAATTTCTCTAAAACCGCTTTAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp ACTAAAGCGGTTTTAGAGAAATTGCAGGCAGCAACCCCACCCACTCCCTTTACCAGGTCCCACGGGATCTaGCTGGTTCTGGCCGGTCTC +
Preference number: 4 (lower is better)
Translates to: TKAVLEKLQAATPPTPFTRSHGI*LVLAGL
Trigger: GAGACCGGCCAGAACCAGTCAGATCCCGTGGGACCT...GGTAAAGGGAGTGGGTGGGGTTGCTGCCTGCAATTTCTCTAAAACCGCTTTAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp ATGCGGGCAGTGTGGGTGCTGAGCTGCTGGAGGAGTAGCTCTCCACTCCCTGACCCCCAACAATTCTTTTaGATTTCCCTCCCTCCCAAA +
Preference number: 4 (lower is better)
Translates to: MRAVWVLSCWRSSSPLPDPQQFF*ISLPPK
Trigger: TTTGGGAGGGAGGGAAATTCAAAAGAATTGTTGGGG...GTCAGGGAGTGGAGAGCTACTCCTCCAGCAGCTCAGCACCCACACTGCCCGCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp AACTGCAGGCCCCCTGGAATTTACCTGGCCATCAGACCTGCCAGCAACAGTGGCAAACGTTTCTGTCAGTaGTGGCCTGGTGCTGTAACG +
Preference number: 4 (lower is better)
Translates to: NCRPPGIYLAIRPASNSGKRFCQ*WPGAVT
Trigger: CGTTACAGCACCAGGCCATCACTGACAGAAACGTTT...GCCACTGTTGCTGGCAGGTCTGATGGCCAGGTAAATTCCAGGGGGCCTGCAGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp GATCTGGTCCCGGTGGCCACACGCATGCGGGCAGTGTGGGTGCTGAGCTGCTGGATGAGGTCTGAAGACTaGCAATTCATTGTATACACA +
Preference number: 4 (lower is better)
Translates to: DLVPVATRMRAVWVLSCWMRSED*QFIVYT
Trigger: TGTGTATACAATGAATTGTCAGTCTTCAGACCTCAT...CCAGCAGCTCAGCACCCACACTGCCCGCATGCGTGTGGCCACCGGGACCAGATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp AACTGCAGGCCCCCTGGAATTTACCTGGCCATCAGACCTGCCAGCAACAGTGGCACAGCCAAAGCCACATaGGCACAAACATACAGACGG +
Preference number: 4 (lower is better)
Translates to: NCRPPGIYLAIRPASNSGTAKAT*AQTYRR
Trigger: CCGTCTGTATGTTTGTGCTCATGTGGCTTTGGCTGT...GCCACTGTTGCTGGCAGGTCTGATGGCCAGGTAAATTCCAGGGGGCCTGCAGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp GATCTGGTCCCGGTGGCCACACGCATGCGGGCAGTGTGGGTGCTGAGCTGCTGGAATAAAATTCCAAGGTaGACAGTGCCCAAATCAGAA +
Preference number: 4 (lower is better)
Translates to: DLVPVATRMRAVWVLSCWNKIPR*TVPKSE
Trigger: TTCTGATTTGGGCACTGTTCACCTTGGAATTTTATT...CCAGCAGCTCAGCACCCACACTGCCCGCATGCGTGTGGCCACCGGGACCAGATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp ACTTTCAGGTCAGCACGAGTGAAGCGTGGTTTCCTGAGCTTGAAGGGCTCTGAAAGCACCTCCAAGGGTTaGGTCTGGCGCAGTCCCACT +
Preference number: 4 (lower is better)
Translates to: TFRSARVKRGFLSLKGSESTSKG*VWRSPT
Trigger: AGTGGGACTGCGCCAGACTCAACCCTTGGAGGTGCT...TTCAGAGCCCTTCAAGCTCAGGAAACCACGCTTCACTCGTGCTGACCTGAAAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp CCGGCACCTCCACACTCTCCACACTCGAGACTTGCAGATGCACGTGTGACGGTGGACCCAGTTGATTTCTaGACAGAAGCTCCTTTCCAG +
Preference number: 4 (lower is better)
Translates to: PAPPHSPHSRLADARVTVDPVDF*TEAPFQ
Trigger: CTGGAAAGGAGCTTCTGTTCAGAAATCAACTGGGTC...CACCGTCACACGTGCATCTGCAAGTCTCGAGTGTGGAGAGTGTGGAGGTGCCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR TCA 90 bp CAGCTGCCAGAATACTCACGGGTGCATCTTCATGCATGTTTGTCTACGTGGGTGATCTCCCCAGCCCCCTaGGTTCTTGGTCTGTGTGGC +
Preference number: 4 (lower is better)
Translates to: QLPEYSRVHLHACLSTWVISPAP*VLGLCG
Trigger: GCCACACAGACCAAGAACTCAGGGGGCTGGGGAGAT...CACCCACGTAGACAAACATGCATGAAGATGCACCCGTGAGTATTCTGGCAGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR TCA 90 bp CCCCTGTCTCCTCTCCCAAGTCCCAGAATCTCTTCCACTCAACTCTACACTGTGCCAGAAGACCATCCTTaGTTGGGCTGGCGTCCACCT +
Preference number: 4 (lower is better)
Translates to: PLSPLPSPRISSTQLYTVPEDHP*LGWRPP
Trigger: AGGTGGACGCCAGCCCAATCAAGGATGGTCTTCTGG...CACAGTGTAGAGTTGAGTGGAAGAGATTCTGGGACTTGGGAGAGGAGACAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp AATGAAGCTGAAGGAATCGAGTGGGAGGGACTGTTCTCCTCTTTGGGGGAGCTCCGAAGTTTTGGGGGTTaGGCCCTGTGCCGATTGCTC +
Preference number: 4 (lower is better)
Translates to: NEAEGIEWEGLFSSLGELRSFGG*ALCRLL
Trigger: GAGCAATCGGCACAGGGCTCAACCCCCAAAACTTCG...GAGCTCCCCCAAAGAGGAGAACAGTCCCTCCCACTCGATTCCTTCAGCTTCATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000454349.7
CDS-3UTR TCA 90 bp ATGCGGGCAGTGTGGGTGCTGAGCTGCTGGAGGAGTAGCTCTCCACTCCCTGACTTTCCAAACAAACCATaGCTACCGCCTTGTCTAGCA +
Preference number: 4 (lower is better)
Translates to: MRAVWVLSCWRSSSPLPDFPNKP*LPPCLA
Trigger: TGCTAGACAAGGCGGTAGTCATGGTTTGTTTGGAAA...GTCAGGGAGTGGAGAGCTACTCCTCCAGCAGCTCAGCACCCACACTGCCCGCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454349.7
CDS-3UTR GCA 90 bp CAAAGGGTAAAAGCGTGCTGCCCGCTCTGCACACGGCAGAAGCTGGAAAATGCCCGCTCCTGTCACTTGTaGGTTGTTTGGGTTTGCTCC +
Preference number: 4 (lower is better)
Translates to: QRVKACCPLCTRQKLENARSCHL*VVWVCS
Trigger: GGAGCAAACCCAAACAACGCACAAGTGACAGGAGCG...GGCATTTTCCAGCTTCTGCCGTGTGCAGAGCGGGCAGCACGCTTTTACCCTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp AATGAAGCTGAAGGAATCGAGTGGGAGGGACTGTTCTCCTCTTTGGGGGAGCTCGTCCCACTCTCACTCTaGAGCAGCGCTCCTGTCACT +
Preference number: 4 (lower is better)
Translates to: NEAEGIEWEGLFSSLGELVPLSL*SSAPVT
Trigger: AGTGACAGGAGCGCTGCTGCAGAGTGAGAGTGGGAC...GAGCTCCCCCAAAGAGGAGAACAGTCCCTCCCACTCGATTCCTTCAGCTTCATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp AACTTTTACAGCCACCCCTCTGGGAGTTGTACACACCTTTCAGTAGCCGAAGGGCGCCCCACCCAGGACTaGTTTCATTTGGCTCACCCC +
Preference number: 4 (lower is better)
Translates to: NFYSHPSGSCTHLSVAEGRPTQD*FHLAHP
Trigger: GGGGTGAGCCAAATGAAAGCAGTCCTGGGTGGGGCG...CCCTTCGGCTACTGAAAGGTGTGTACAACTCCCAGAGGGGTGGCTGTAAAAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000301923.13
ENST00000454349.7
CDS-3UTR GCA 90 bp CCCGGCACCTCCACACTCTCCACACTCGAGACTTGCAGATGCACGTGTGACGGTCCACTGTTGGGAAACTaGTTGAGCATTGAGGCAGAA +
Preference number: 4 (lower is better)
Translates to: PGTSTLSTLETCRCTCDGPLLGN*LSIEAE
Trigger: TTCTGCCTCAATGCTCAAGCAGTTTCCCAACAGTGG...ACCGTCACACGTGCATCTGCAAGTCTCGAGTGTGGAGAGTGTGGAGGTGCCGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR GCA 90 bp CAAAGGGTAAAAGCGTGCTGCCCGCTCTGCACACGGCAGAAGCTGGAAAATGCCAGCAGTGGGCCATGCTaGATGCAGATCGTTCTCAAG +
Preference number: 4 (lower is better)
Translates to: QRVKACCPLCTRQKLENASSGPC*MQIVLK
Trigger: CTTGAGAACGATCTGCATGCAGCATGGCCCACTGCT...GGCATTTTCCAGCTTCTGCCGTGTGCAGAGCGGGCAGCACGCTTTTACCCTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp AATGAAGCTGAAGGAATCGAGTGGGAGGGACTGTTCTCCTCTTTGGGGGAGCTCAGGGGGCTGAGCTTGTaGCAGAAAGCGGCTGACTTC +
Preference number: 4 (lower is better)
Translates to: NEAEGIEWEGLFSSLGELRGLSL*QKAADF
Trigger: GAAGTCAGCCGCTTTCTGGCACAAGCTCAGCCCCCT...GAGCTCCCCCAAAGAGGAGAACAGTCCCTCCCACTCGATTCCTTCAGCTTCATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp ACTAAAGCGGTTTTAGAGAAATTGCAGGCAGCAACCCCACCCACTCCCTTTACCCGCACTTGGGGTTGCTaGAGGTGTAGGGGGCTGAGC +
Preference number: 4 (lower is better)
Translates to: TKAVLEKLQAATPPTPFTRTWGC*RCRGLS
Trigger: GCTCAGCCCCCTACACCTGCAGCAACCCCAAGTGCG...GGTAAAGGGAGTGGGTGGGGTTGCTGCCTGCAATTTCTCTAAAACCGCTTTAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp GATCTGGTCCCGGTGGCCACACGCATGCGGGCAGTGTGGGTGCTGAGCTGCTGGACTAACGAAAAGGCCTaGATGAAACTTAACAGATAC +
Preference number: 4 (lower is better)
Translates to: DLVPVATRMRAVWVLSCWTNEKA*MKLNRY
Trigger: GTATCTGTTAAGTTTCATGCAGGCCTTTTCGTTAGT...CCAGCAGCTCAGCACCCACACTGCCCGCATGCGTGTGGCCACCGGGACCAGATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp AATGAAGCTGAAGGAATCGAGTGGGAGGGACTGTTCTCCTCTTTGGGGGAGCTCCGCACGACAGCACTTTaGTCCACACAGAGAGCGGTC +
Preference number: 4 (lower is better)
Translates to: NEAEGIEWEGLFSSLGELRTTAL*STQRAV
Trigger: GACCGCTCTCTGTGTGGAGCAAAGTGCTGTCGTGCG...GAGCTCCCCCAAAGAGGAGAACAGTCCCTCCCACTCGATTCCTTCAGCTTCATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp AACTGCAGGCCCCCTGGAATTTACCTGGCCATCAGACCTGCCAGCAACAGTGGCTTAAATTCAGCCCACTaGCTTTGGGGCCTGTCCAGA +
Preference number: 4 (lower is better)
Translates to: NCRPPGIYLAIRPASNSGLNSAH*LWGLSR
Trigger: TCTGGACAGGCCCCAAAGGCAGTGGGCTGAATTTAA...GCCACTGTTGCTGGCAGGTCTGATGGCCAGGTAAATTCCAGGGGGCCTGCAGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp ATGCGGGCAGTGTGGGTGCTGAGCTGCTGGAGGAGTAGCTCTCCACTCCCTGACAAGGCCACTCCACTTTaGCTCCAGTCAACTTTTACA +
Preference number: 4 (lower is better)
Translates to: MRAVWVLSCWRSSSPLPDKATPL*LQSTFT
Trigger: TGTAAAAGTTGACTGGAGGCAAAGTGGAGTGGCCTT...GTCAGGGAGTGGAGAGCTACTCCTCCAGCAGCTCAGCACCCACACTGCCCGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp AACTTTTACAGCCACCCCTCTGGGAGTTGTACACACCTTTCAGTAGCCGAAGGGGGACTAACGTGGGTCTaGGTCGCCTGGGTACCTTCC +
Preference number: 4 (lower is better)
Translates to: NFYSHPSGSCTHLSVAEGGLTWV*VAWVPS
Trigger: GGAAGGTACCCAGGCGACGCAGACCCACGTTAGTCC...CCCTTCGGCTACTGAAAGGTGTGTACAACTCCCAGAGGGGTGGCTGTAAAAGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp ACTAAAGCGGTTTTAGAGAAATTGCAGGCAGCAACCCCACCCACTCCCTTTACCGCGTGCTGCCCGCTCTaGACACGGCAGAAGCTGGAA +
Preference number: 4 (lower is better)
Translates to: TKAVLEKLQAATPPTPFTACCPL*TRQKLE
Trigger: TTCCAGCTTCTGCCGTGTGCAGAGCGGGCAGCACGC...GGTAAAGGGAGTGGGTGGGGTTGCTGCCTGCAATTTCTCTAAAACCGCTTTAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp AACTGCAGGCCCCCTGGAATTTACCTGGCCATCAGACCTGCCAGCAACAGTGGCTGGCTTCATACAGCCTaGCAAATGCAAGGGAAGCAG +
Preference number: 4 (lower is better)
Translates to: NCRPPGIYLAIRPASNSGWLHTA*QMQGKQ
Trigger: CTGCTTCCCTTGCATTTGGCAGGCTGTATGAAGCCA...GCCACTGTTGCTGGCAGGTCTGATGGCCAGGTAAATTCCAGGGGGCCTGCAGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp CACACACATGTGCGTCCCCCTTGCTCAGGATGTCTGGGTGTATGTACGAAGGCAGGACAAAGAAGAGGCTaGATGCAGACCTCCCCTGTC +
Preference number: 4 (lower is better)
Translates to: HTHVRPPCSGCLGVCTKAGQRRG*MQTSPV
Trigger: GACAGGGGAGGTCTGCATGCAGCCTCTTCTTTGTCC...TGCCTTCGTACATACACCCAGACATCCTGAGCAAGGGGGACGCACATGTGTGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp GTATGCCACAATCACTCGGGATCTGGTCCCGGTGGCCACACGCATGCGGGCAGTCAGTGCAAACCAAAATaGCAGGGACTACATCCTTCT +
Preference number: 4 (lower is better)
Translates to: VCHNHSGSGPGGHTHAGSQCKPK*QGLHPS
Trigger: AGAAGGATGTAGTCCCTGGCATTTTGGTTTGCACTG...ACTGCCCGCATGCGTGTGGCCACCGGGACCAGATCCCGAGTGATTGTGGCATAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp ATGCGGGCAGTGTGGGTGCTGAGCTGCTGGAGGAGTAGCTCTCCACTCCCTGACGGCGAAGGGGGTGTCTaGAAAGAAGCAATTCAAAAT +
Preference number: 4 (lower is better)
Translates to: MRAVWVLSCWRSSSPLPDGEGGV*KEAIQN
Trigger: ATTTTGAATTGCTTCTTTGCAGACACCCCCTTCGCC...GTCAGGGAGTGGAGAGCTACTCCTCCAGCAGCTCAGCACCCACACTGCCCGCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp GTATGCCACAATCACTCGGGATCTGGTCCCGGTGGCCACACGCATGCGGGCAGTTTTGATGCCCTTTTCTaGACCTTCTGTCTAAAGGGG +
Preference number: 4 (lower is better)
Translates to: VCHNHSGSGPGGHTHAGSFDALF*TFCLKG
Trigger: CCCCTTTAGACAGAAGGTGCAGAAAAGGGCATCAAA...ACTGCCCGCATGCGTGTGGCCACCGGGACCAGATCCCGAGTGATTGTGGCATAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp ATGCGGGCAGTGTGGGTGCTGAGCTGCTGGAGGAGTAGCTCTCCACTCCCTGACAGTGCACCTCTAAAGTaGCTAGTTTCTGTGTCCATG +
Preference number: 4 (lower is better)
Translates to: MRAVWVLSCWRSSSPLPDSAPLK*LVSVSM
Trigger: CATGGACACAGAAACTAGGCACTTTAGAGGTGCACT...GTCAGGGAGTGGAGAGCTACTCCTCCAGCAGCTCAGCACCCACACTGCCCGCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp CCCCTGTCTCCTCTCCCAAGTCCCAGAATCTCTTCCACTCAACTCTACACTGTGCTCATCCTTAGGTGTTaGAGGCTGTGGCCCGCTGCT +
Preference number: 4 (lower is better)
Translates to: PLSPLPSPRISSTQLYTVLILRC*RLWPAA
Trigger: AGCAGCGGGCCACAGCCTGCAACACCTAAGGATGAG...CACAGTGTAGAGTTGAGTGGAAGAGATTCTGGGACTTGGGAGAGGAGACAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp GTATGCCACAATCACTCGGGATCTGGTCCCGGTGGCCACACGCATGCGGGCAGTCTCCCCATGCTGAAGTaGCATCATCAATGTCCATTT +
Preference number: 4 (lower is better)
Translates to: VCHNHSGSGPGGHTHAGSLPMLK*HHQCPF
Trigger: AAATGGACATTGATGATGGCACTTCAGCATGGGGAG...ACTGCCCGCATGCGTGTGGCCACCGGGACCAGATCCCGAGTGATTGTGGCATAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp CTTTGGTGGAAAAGACCCGGCACCTCCACACTCTCCACACTCGAGACTTGCAGAGTTTGGTTCTCGAGGTaGTGGGCCCCCTTGGGAATT +
Preference number: 4 (lower is better)
Translates to: LWWKRPGTSTLSTLETCRVWFSR*WAPLGI
Trigger: AATTCCCAAGGGGGCCCAGCACCTCGAGAACCAAAC...TCTGCAAGTCTCGAGTGTGGAGAGTGTGGAGGTGCCGGGTCTTTTCCACCAAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR GCA 90 bp ACTTTCAGGTCAGCACGAGTGAAGCGTGGTTTCCTGAGCTTGAAGGGCTCTGAAGAGCCCTGTGCCGATTaGTCCAAGGCTGACGTTGGG +
Preference number: 4 (lower is better)
Translates to: TFRSARVKRGFLSLKGSEEPCAD*SKADVG
Trigger: CCCAACGTCAGCCTTGGAGCAATCGGCACAGGGCTC...TTCAGAGCCCTTCAAGCTCAGGAAACCACGCTTCACTCGTGCTGACCTGAAAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454349.7
CDS-3UTR CCA 90 bp AATGAAGCTGAAGGAATCGAGTGGGAGGGACTGTTCTCCTCTTTGGGGGAGCTCAGCTGCCAATTGGGCTaGCGGCCGTTGGTTGGCTTA +
Preference number: 4 (lower is better)
Translates to: NEAEGIEWEGLFSSLGELSCQLG*RPLVGL
Trigger: TAAGCCAACCAACGGCCGCCAGCCCAATTGGCAGCT...GAGCTCCCCCAAAGAGGAGAACAGTCCCTCCCACTCGATTCCTTCAGCTTCATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp ACTTTCAGGTCAGCACGAGTGAAGCGTGGTTTCCTGAGCTTGAAGGGCTCTGAATGGAGAGCTGCCAATTaGGCTGGCGGCCGTTGGTTG +
Preference number: 4 (lower is better)
Translates to: TFRSARVKRGFLSLKGSEWRAAN*AGGRWL
Trigger: CAACCAACGGCCGCCAGCCCAATTGGCAGCTCTCCA...TTCAGAGCCCTTCAAGCTCAGGAAACCACGCTTCACTCGTGCTGACCTGAAAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp AACTTTTACAGCCACCCCTCTGGGAGTTGTACACACCTTTCAGTAGCCGAAGGGTGGAGAGCTGCCAATTaGGCTGGCGGCCGTTGGTTG +
Preference number: 4 (lower is better)
Translates to: NFYSHPSGSCTHLSVAEGWRAAN*AGGRWL
Trigger: CAACCAACGGCCGCCAGCCCAATTGGCAGCTCTCCA...CCCTTCGGCTACTGAAAGGTGTGTACAACTCCCAGAGGGGTGGCTGTAAAAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp ACTAAAGCGGTTTTAGAGAAATTGCAGGCAGCAACCCCACCCACTCCCTTTACCGAGCATGCAGGACGGTaGAGGGGGCTGCCCACGTTT +
Preference number: 4 (lower is better)
Translates to: TKAVLEKLQAATPPTPFTEHAGR*RGLPTF
Trigger: AAACGTGGGCAGCCCCCTCCACCGTCCTGCATGCTC...GGTAAAGGGAGTGGGTGGGGTTGCTGCCTGCAATTTCTCTAAAACCGCTTTAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp AACTTTTACAGCCACCCCTCTGGGAGTTGTACACACCTTTCAGTAGCCGAAGGGTCTTCCCAGCTGGGATaGCGAGCTCCTGTGACTGGC +
Preference number: 4 (lower is better)
Translates to: NFYSHPSGSCTHLSVAEGSSQLG*RAPVTG
Trigger: GCCAGTCACAGGAGCTCGCCATCCCAGCTGGGAAGA...CCCTTCGGCTACTGAAAGGTGTGTACAACTCCCAGAGGGGTGGCTGTAAAAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp GTATGCCACAATCACTCGGGATCTGGTCCCGGTGGCCACACGCATGCGGGCAGTAAGGCCCACTATCTGTaGTTCCCATGTCTTTGGAAT +
Preference number: 4 (lower is better)
Translates to: VCHNHSGSGPGGHTHAGSKAHYL*FPCLWN
Trigger: ATTCCAAAGACATGGGAACCACAGATAGTGGGCCTT...ACTGCCCGCATGCGTGTGGCCACCGGGACCAGATCCCGAGTGATTGTGGCATAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp ATGCGGGCAGTGTGGGTGCTGAGCTGCTGGAGGAGTAGCTCTCCACTCCCTGACGAAGCTGGCTCAGCATaGCAATTTGTTGAGGAGATA +
Preference number: 4 (lower is better)
Translates to: MRAVWVLSCWRSSSPLPDEAGSA*QFVEEI
Trigger: TATCTCCTCAACAAATTGCCATGCTGAGCCAGCTTC...GTCAGGGAGTGGAGAGCTACTCCTCCAGCAGCTCAGCACCCACACTGCCCGCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp CCCGGCACCTCCACACTCTCCACACTCGAGACTTGCAGATGCACGTGTGACGGTTTTGGTTTGAAGGTCTaGGAGCCCCACATTCAATGC +
Preference number: 4 (lower is better)
Translates to: PGTSTLSTLETCRCTCDGFGLKV*EPHIQC
Trigger: GCATTGAATGTGGGGCTCCCAGACCTTCAAACCAAA...ACCGTCACACGTGCATCTGCAAGTCTCGAGTGTGGAGAGTGTGGAGGTGCCGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR CCA 90 bp CTCTCCACACTCGAGACTTGCAGATGCACGTGTGACGGTGCCATTCTTCGTATACCAGCAGGACCCGTATaGCCACCCAGTGTGTCACCA +
Preference number: 4 (lower is better)
Translates to: LSTLETCRCTCDGAILRIPAGPV*PPSVSP
Trigger: TGGTGACACACTGGGTGGCCATACGGGTCCTGCTGG...TATACGAAGAATGGCACCGTCACACGTGCATCTGCAAGTCTCGAGTGTGGAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR CCA 90 bp AACTGCAGGCCCCCTGGAATTTACCTGGCCATCAGACCTGCCAGCAACAGTGGCTTTCCATGGCACTCCTaGTTGGAATTCTGGAGGCCA +
Preference number: 4 (lower is better)
Translates to: NCRPPGIYLAIRPASNSGFPWHS*LEFWRP
Trigger: TGGCCTCCAGAATTCCAACCAGGAGTGCCATGGAAA...GCCACTGTTGCTGGCAGGTCTGATGGCCAGGTAAATTCCAGGGGGCCTGCAGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp ATGCGGGCAGTGTGGGTGCTGAGCTGCTGGAGGAGTAGCTCTCCACTCCCTGACTTGGATACCTTTCCATaGCACTCCTGGTTGGAATTC +
Preference number: 4 (lower is better)
Translates to: MRAVWVLSCWRSSSPLPDLDTFP*HSWLEF
Trigger: GAATTCCAACCAGGAGTGCCATGGAAAGGTATCCAA...GTCAGGGAGTGGAGAGCTACTCCTCCAGCAGCTCAGCACCCACACTGCCCGCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp CAAAGGGTAAAAGCGTGCTGCCCGCTCTGCACACGGCAGAAGCTGGAAAATGCCAGGGAGATGATGGTTTaGGGTTGGTCAGACCAGGAG +
Preference number: 4 (lower is better)
Translates to: QRVKACCPLCTRQKLENAREMMV*GWSDQE
Trigger: CTCCTGGTCTGACCAACCCCAAACCATCATCTCCCT...GGCATTTTCCAGCTTCTGCCGTGTGCAGAGCGGGCAGCACGCTTTTACCCTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp GGGTTTATCTTAAAGATGGGGGCGAAGGGGGTGTCTGCAAAGAAGCAATTCAAACTGCCACCCCGCAGCTaGCGCACTTGGGGTTGCTGC +
Preference number: 4 (lower is better)
Translates to: GFILKMGAKGVSAKKQFKLPPRS*RTWGCC
Trigger: GCAGCAACCCCAAGTGCGCCAGCTGCGGGGTGGCAG...TTTGAATTGCTTCTTTGCAGACACCCCCTTCGCCCCCATCTTTAAGATAAACCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp AACTTTTACAGCCACCCCTCTGGGAGTTGTACACACCTTTCAGTAGCCGAAGGGGGATCTGACTGGTTCTaGCCGGTCTCCAGCGACTGC +
Preference number: 4 (lower is better)
Translates to: NFYSHPSGSCTHLSVAEGGSDWF*PVSSDC
Trigger: GCAGTCGCTGGAGACCGGCCAGAACCAGTCAGATCC...CCCTTCGGCTACTGAAAGGTGTGTACAACTCCCAGAGGGGTGGCTGTAAAAGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp ACTTTCAGGTCAGCACGAGTGAAGCGTGGTTTCCTGAGCTTGAAGGGCTCTGAAGGATCTGACTGGTTCTaGCCGGTCTCCAGCGACTGC +
Preference number: 4 (lower is better)
Translates to: TFRSARVKRGFLSLKGSEGSDWF*PVSSDC
Trigger: GCAGTCGCTGGAGACCGGCCAGAACCAGTCAGATCC...TTCAGAGCCCTTCAAGCTCAGGAAACCACGCTTCACTCGTGCTGACCTGAAAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp CAAAGGGTAAAAGCGTGCTGCCCGCTCTGCACACGGCAGAAGCTGGAAAATGCCAAAATAAAAAGCAGATaGGCCGGCCAGCCAGCCTGC +
Preference number: 4 (lower is better)
Translates to: QRVKACCPLCTRQKLENAKIKSR*AGQPAC
Trigger: GCAGGCTGGCTGGCCGGCCCATCTGCTTTTTATTTT...GGCATTTTCCAGCTTCTGCCGTGTGCAGAGCGGGCAGCACGCTTTTACCCTTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp CCCCTGTCTCCTCTCCCAAGTCCCAGAATCTCTTCCACTCAACTCTACACTGTGTTCAGAGGCATGGGGTaGGGAGGTATGGTGAGCAGG +
Preference number: 4 (lower is better)
Translates to: PLSPLPSPRISSTQLYTVFRGMG*GGMVSR
Trigger: CCTGCTCACCATACCTCCCCACCCCATGCCTCTGAA...CACAGTGTAGAGTTGAGTGGAAGAGATTCTGGGACTTGGGAGAGGAGACAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp CCCCTGTCTCCTCTCCCAAGTCCCAGAATCTCTTCCACTCAACTCTACACTGTGTGGGTGCTGAGCTGCTaGAGGAGTAGCTCTCCACTC +
Preference number: 4 (lower is better)
Translates to: PLSPLPSPRISSTQLYTVWVLSC*RSSSPL
Trigger: GAGTGGAGAGCTACTCCTCCAGCAGCTCAGCACCCA...CACAGTGTAGAGTTGAGTGGAAGAGATTCTGGGACTTGGGAGAGGAGACAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp ACTAAAGCGGTTTTAGAGAAATTGCAGGCAGCAACCCCACCCACTCCCTTTACCTGGGTCTGCGTCGCCTaGGTACCTTCCCCTGTCTCC +
Preference number: 4 (lower is better)
Translates to: TKAVLEKLQAATPPTPFTWVCVA*VPSPVS
Trigger: GGAGACAGGGGAAGGTACCCAGGCGACGCAGACCCA...GGTAAAGGGAGTGGGTGGGGTTGCTGCCTGCAATTTCTCTAAAACCGCTTTAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp CAAAGGGTAAAAGCGTGCTGCCCGCTCTGCACACGGCAGAAGCTGGAAAATGCCGTAAACCTGCGCTCTTaGACTAACGTGGGTCTGCGT +
Preference number: 4 (lower is better)
Translates to: QRVKACCPLCTRQKLENAVNLRS*TNVGLR
Trigger: ACGCAGACCCACGTTAGTCCAAGAGCGCAGGTTTAC...GGCATTTTCCAGCTTCTGCCGTGTGCAGAGCGGGCAGCACGCTTTTACCCTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp CACACACATGTGCGTCCCCCTTGCTCAGGATGTCTGGGTGTATGTACGAAGGCAACCTGCCAGCAACAGTaGCAAGAGGACTCAGAGGTC +
Preference number: 4 (lower is better)
Translates to: HTHVRPPCSGCLGVCTKATCQQQ*QEDSEV
Trigger: GACCTCTGAGTCCTCTTGCCACTGTTGCTGGCAGGT...TGCCTTCGTACATACACCCAGACATCCTGAGCAAGGGGGACGCACATGTGTGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp CACACACATGTGCGTCCCCCTTGCTCAGGATGTCTGGGTGTATGTACGAAGGCACCCCTGGAATTTACCTaGCCATCAGACCTGCCAGCA +
Preference number: 4 (lower is better)
Translates to: HTHVRPPCSGCLGVCTKAPLEFT*PSDLPA
Trigger: TGCTGGCAGGTCTGATGGCCAGGTAAATTCCAGGGG...TGCCTTCGTACATACACCCAGACATCCTGAGCAAGGGGGACGCACATGTGTGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp ATGCGGGCAGTGTGGGTGCTGAGCTGCTGGAGGAGTAGCTCTCCACTCCCTGACTTTTCCAGAGAACACTaGAGCCTGTGGAGTTCCATT +
Preference number: 4 (lower is better)
Translates to: MRAVWVLSCWRSSSPLPDFSREH*SLWSSI
Trigger: AATGGAACTCCACAGGCTCCAGTGTTCTCTGGAAAA...GTCAGGGAGTGGAGAGCTACTCCTCCAGCAGCTCAGCACCCACACTGCCCGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp ATGCGGGCAGTGTGGGTGCTGAGCTGCTGGAGGAGTAGCTCTCCACTCCCTGACAGGGGATGGATCTGCTaGAAGAGAGAAATTCAGACA +
Preference number: 4 (lower is better)
Translates to: MRAVWVLSCWRSSSPLPDRGWIC*KREIQT
Trigger: TGTCTGAATTTCTCTCTTCCAGCAGATCCATCCCCT...GTCAGGGAGTGGAGAGCTACTCCTCCAGCAGCTCAGCACCCACACTGCCCGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp AACTGCAGGCCCCCTGGAATTTACCTGGCCATCAGACCTGCCAGCAACAGTGGCTCCAACCCTGCTTCATaGGTGCCCAAATCTAGGCAA +
Preference number: 4 (lower is better)
Translates to: NCRPPGIYLAIRPASNSGSNPAS*VPKSRQ
Trigger: TTGCCTAGATTTGGGCACCCATGAAGCAGGGTTGGA...GCCACTGTTGCTGGCAGGTCTGATGGCCAGGTAAATTCCAGGGGGCCTGCAGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp GTATGCCACAATCACTCGGGATCTGGTCCCGGTGGCCACACGCATGCGGGCAGTGCCCAAATCAGAAGGTaGGTGGATAATATGCATGCA +
Preference number: 4 (lower is better)
Translates to: VCHNHSGSGPGGHTHAGSAQIRR*VDNMHA
Trigger: TGCATGCATATTATCCACCCACCTTCTGATTTGGGC...ACTGCCCGCATGCGTGTGGCCACCGGGACCAGATCCCGAGTGATTGTGGCATAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp GTATGCCACAATCACTCGGGATCTGGTCCCGGTGGCCACACGCATGCGGGCAGTTCACTGCATACACTTTaGTCACTGGTGTGTGCAAAG +
Preference number: 4 (lower is better)
Translates to: VCHNHSGSGPGGHTHAGSSLHTL*SLVCAK
Trigger: CTTTGCACACACCAGTGACCAAAGTGTATGCAGTGA...ACTGCCCGCATGCGTGTGGCCACCGGGACCAGATCCCGAGTGATTGTGGCATAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp ATGCGGGCAGTGTGGGTGCTGAGCTGCTGGAGGAGTAGCTCTCCACTCCCTGACCTCCCGAGCCCCAAGTaGAATTTGCATAATTTGAAG +
Preference number: 4 (lower is better)
Translates to: MRAVWVLSCWRSSSPLPDLPSPK*NLHNLK
Trigger: CTTCAAATTATGCAAATTCCACTTGGGGCTCGGGAG...GTCAGGGAGTGGAGAGCTACTCCTCCAGCAGCTCAGCACCCACACTGCCCGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp CAAAGGGTAAAAGCGTGCTGCCCGCTCTGCACACGGCAGAAGCTGGAAAATGCCAGATGTGAATTGGGTTaGGGGAGGTGCCGTTGTTGG +
Preference number: 4 (lower is better)
Translates to: QRVKACCPLCTRQKLENARCELG*GRCRCW
Trigger: CCAACAACGGCACCTCCCCCAACCCAATTCACATCT...GGCATTTTCCAGCTTCTGCCGTGTGCAGAGCGGGCAGCACGCTTTTACCCTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp CTTTGGTGGAAAAGACCCGGCACCTCCACACTCTCCACACTCGAGACTTGCAGACCCCAACAGGGAGCCTaGGCATTGCCTTGGTTTTCA +
Preference number: 4 (lower is better)
Translates to: LWWKRPGTSTLSTLETCRPQQGA*ALPWFS
Trigger: TGAAAACCAAGGCAATGCCCAGGCTCCCTGTTGGGG...TCTGCAAGTCTCGAGTGTGGAGAGTGTGGAGGTGCCGGGTCTTTTCCACCAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR CCA 90 bp CCTCCACACTCTCCACACTCGAGACTTGCAGATGCACGTGTGACGGTGCCATTCTGTTTGAGAGCACCCTaGGGTCCAAATCAGTTCGGC +
Preference number: 4 (lower is better)
Translates to: PPHSPHSRLADARVTVPFCLRAP*GPNQFG
Trigger: GCCGAACTGATTTGGACCCCAGGGTGCTCTCAAACA...GAATGGCACCGTCACACGTGCATCTGCAAGTCTCGAGTGTGGAGAGTGTGGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR CCA 90 bp AATGAAGCTGAAGGAATCGAGTGGGAGGGACTGTTCTCCTCTTTGGGGGAGCTCAAGACCATCCTTGATTaGGCTGGCGTCCACCTCCCC +
Preference number: 4 (lower is better)
Translates to: NEAEGIEWEGLFSSLGELKTILD*AGVHLP
Trigger: GGGGAGGTGGACGCCAGCCCAATCAAGGATGGTCTT...GAGCTCCCCCAAAGAGGAGAACAGTCCCTCCCACTCGATTCCTTCAGCTTCATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp ACTAAAGCGGTTTTAGAGAAATTGCAGGCAGCAACCCCACCCACTCCCTTTACCAGGTGTTGCAGGCTGTaGCCCGCTGCTCCAGCTGGA +
Preference number: 4 (lower is better)
Translates to: TKAVLEKLQAATPPTPFTRCCRL*PAAPAG
Trigger: TCCAGCTGGAGCAGCGGGCCACAGCCTGCAACACCT...GGTAAAGGGAGTGGGTGGGGTTGCTGCCTGCAATTTCTCTAAAACCGCTTTAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp CCTCCACACTCTCCACACTCGAGACTTGCAGATGCACGTGTGACGGTGCCATTCTACTGGTCATTGGGGTaGGCAGGTTTGGTTCTCGAG +
Preference number: 4 (lower is better)
Translates to: PPHSPHSRLADARVTVPFYWSLG*AGLVLE
Trigger: CTCGAGAACCAAACCTGCCCACCCCAATGACCAGTA...GAATGGCACCGTCACACGTGCATCTGCAAGTCTCGAGTGTGGAGAGTGTGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446273.1
3UTR CAA 72 bp GTGACTGGACCACACACACACACATGTGCGTCCCCCTaGCTCAGGATGTCTGGGTGTATGTACGAAGGCACT +
Preference number: 4 (lower is better)
Translates to: VTGPHTHTCASP*LRMSGCMYEGT
Trigger: AGTGCCTTCGTACATACACCCAGACATCCTGAGCAAGGGGGACGCACATGTGTGTGTGTGTGGTCCAGTCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp AATGAAGCTGAAGGAATCGAGTGGGAGGGACTGTTCTCCTCTTTGGGGGAGCTCCATTGTTGCCACCATTaGCTGGTGGCGATGGAGAGC +
Preference number: 4 (lower is better)
Translates to: NEAEGIEWEGLFSSLGELHCCHH*LVAMES
Trigger: GCTCTCCATCGCCACCAGTCAATGGTGGCAACAATG...GAGCTCCCCCAAAGAGGAGAACAGTCCCTCCCACTCGATTCCTTCAGCTTCATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp GGGTTTATCTTAAAGATGGGGGCGAAGGGGGTGTCTGCAAAGAAGCAATTCAAAGATGGCGAGCTCCTGTaGCTGGCCCGTCACTCTCCC +
Preference number: 4 (lower is better)
Translates to: GFILKMGAKGVSAKKQFKDGELL*LARHSP
Trigger: GGGAGAGTGACGGGCCAGTCACAGGAGCTCGCCATC...TTTGAATTGCTTCTTTGCAGACACCCCCTTCGCCCCCATCTTTAAGATAAACCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp CCCCTGTCTCCTCTCCCAAGTCCCAGAATCTCTTCCACTCAACTCTACACTGTGGCACACTTCCTGGGGTaGCATAGGGGTCAGATTCAG +
Preference number: 4 (lower is better)
Translates to: PLSPLPSPRISSTQLYTVAHFLG*HRGQIQ
Trigger: CTGAATCTGACCCCTATGTCACCCCAGGAAGTGTGC...CACAGTGTAGAGTTGAGTGGAAGAGATTCTGGGACTTGGGAGAGGAGACAGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp ACTTTCAGGTCAGCACGAGTGAAGCGTGGTTTCCTGAGCTTGAAGGGCTCTGAAGCTGCTCCAGGGAGATaGTGGTTTGGGGTTGGTCAG +
Preference number: 4 (lower is better)
Translates to: TFRSARVKRGFLSLKGSEAAPGR*WFGVGQ
Trigger: CTGACCAACCCCAAACCATCATCTCCCTGGAGCAGC...TTCAGAGCCCTTCAAGCTCAGGAAACCACGCTTCACTCGTGCTGACCTGAAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp TGTGCACGTGTCTCTGTGAGCACATTCACGGTGCATGCACCATTTTTGATGTCTGCAGGTGTAGGGGGCTaGGCTTGTGCCAGAAAGCGG +
Preference number: 4 (lower is better)
Translates to: CARVSVSTFTVHAPFLMSAGVGG*ACARKR
Trigger: CCGCTTTCTGGCACAAGCTCAGCCCCCTACACCTGC...AGACATCAAAAATGGTGCATGCACCGTGAATGTGCTCACAGAGACACGTGCACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp ATGCGGGCAGTGTGGGTGCTGAGCTGCTGGAGGAGTAGCTCTCCACTCCCTGACAACGACCATGAGGTCTaGAGACTGACAATTCATTGT +
Preference number: 4 (lower is better)
Translates to: MRAVWVLSCWRSSSPLPDNDHEV*RLTIHC
Trigger: ACAATGAATTGTCAGTCTTCAGACCTCATGGTCGTT...GTCAGGGAGTGGAGAGCTACTCCTCCAGCAGCTCAGCACCCACACTGCCCGCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp GTATGCCACAATCACTCGGGATCTGGTCCCGGTGGCCACACGCATGCGGGCAGTTCTTGCCTATTTATCTaGTCTTTCCCCTCCCATGAA +
Preference number: 4 (lower is better)
Translates to: VCHNHSGSGPGGHTHAGSSCLFI*SFPSHE
Trigger: TTCATGGGAGGGGAAAGATCAGATAAATAGGCAAGA...ACTGCCCGCATGCGTGTGGCCACCGGGACCAGATCCCGAGTGATTGTGGCATAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp CCCCTGTCTCCTCTCCCAAGTCCCAGAATCTCTTCCACTCAACTCTACACTGTGGCATCAACAGCAACGTaGTGTGACGCCCATGTGGGA +
Preference number: 4 (lower is better)
Translates to: PLSPLPSPRISSTQLYTVASTAT*CDAHVG
Trigger: TCCCACATGGGCGTCACATCACGTTGCTGTTGATGC...CACAGTGTAGAGTTGAGTGGAAGAGATTCTGGGACTTGGGAGAGGAGACAGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp ATGCGGGCAGTGTGGGTGCTGAGCTGCTGGAGGAGTAGCTCTCCACTCCCTGACATAAAGAAGCGACGATaGCCACATGTGGGACTTTTT +
Preference number: 4 (lower is better)
Translates to: MRAVWVLSCWRSSSPLPDIKKRR*PHVGLF
Trigger: AAAAAGTCCCACATGTGGTCATCGTCGCTTCTTTAT...GTCAGGGAGTGGAGAGCTACTCCTCCAGCAGCTCAGCACCCACACTGCCCGCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp ATGCGGGCAGTGTGGGTGCTGAGCTGCTGGAGGAGTAGCTCTCCACTCCCTGACACTATACAAGATCAGTaGGATCCAACTGAAAAGGGC +
Preference number: 4 (lower is better)
Translates to: MRAVWVLSCWRSSSPLPDTIQDQ*DPTEKG
Trigger: GCCCTTTTCAGTTGGATCTCACTGATCTTGTATAGT...GTCAGGGAGTGGAGAGCTACTCCTCCAGCAGCTCAGCACCCACACTGCCCGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp AACTGCAGGCCCCCTGGAATTTACCTGGCCATCAGACCTGCCAGCAACAGTGGCTTGCTTCCAGTGCTTTaGCCTCCAACTTCACTTCCT +
Preference number: 4 (lower is better)
Translates to: NCRPPGIYLAIRPASNSGLLPVL*PPTSLP
Trigger: AGGAAGTGAAGTTGGAGGTCAAAGCACTGGAAGCAA...GCCACTGTTGCTGGCAGGTCTGATGGCCAGGTAAATTCCAGGGGGCCTGCAGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp TGTGCACGTGTCTCTGTGAGCACATTCACGGTGCATGCACCATTTTTGATGTCTGCCCCAGCCAGTGTTTaGGAGCACCCTGGGGTCCAA +
Preference number: 4 (lower is better)
Translates to: CARVSVSTFTVHAPFLMSAPASV*EHPGVQ
Trigger: TTGGACCCCAGGGTGCTCTCAAACACTGGCTGGGGC...AGACATCAAAAATGGTGCATGCACCGTGAATGTGCTCACAGAGACACGTGCACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp AACTGCAGGCCCCCTGGAATTTACCTGGCCATCAGACCTGCCAGCAACAGTGGCCATCCAGACTTCATTTaGTTGCTTTGGCTGGGTGCA +
Preference number: 4 (lower is better)
Translates to: NCRPPGIYLAIRPASNSGHPDFI*LLWLGA
Trigger: TGCACCCAGCCAAAGCAATCAAATGAAGTCTGGATG...GCCACTGTTGCTGGCAGGTCTGATGGCCAGGTAAATTCCAGGGGGCCTGCAGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp GCAGCTGCCAGAATACTCACGGGTGCATCTTCATGCATGTTTGTCTACGTGGGTCCAGAAGACCATCCTTaGTTGGGCTGGCGTCCACCT +
Preference number: 4 (lower is better)
Translates to: AAARILTGASSCMFVYVGPEDHP*LGWRPP
Trigger: AGGTGGACGCCAGCCCAATCAAGGATGGTCTTCTGG...ACCCACGTAGACAAACATGCATGAAGATGCACCCGTGAGTATTCTGGCAGCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR GCA 90 bp AATGAAGCTGAAGGAATCGAGTGGGAGGGACTGTTCTCCTCTTTGGGGGAGCTCAACACTTTGTGGTCCTaGTGGCAACGGAATCGCGGC +
Preference number: 4 (lower is better)
Translates to: NEAEGIEWEGLFSSLGELNTLWS*WQRNRG
Trigger: GCCGCGATTCCGTTGCCAGCAGGACCACAAAGTGTT...GAGCTCCCCCAAAGAGGAGAACAGTCCCTCCCACTCGATTCCTTCAGCTTCATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp CCCCTGTCTCCTCTCCCAAGTCCCAGAATCTCTTCCACTCAACTCTACACTGTGTGCGTTGTTTGGGTTTaGTCCAGGTGCTGTGCAGGG +
Preference number: 4 (lower is better)
Translates to: PLSPLPSPRISSTQLYTVCVVWV*SRCCAG
Trigger: CCCTGCACAGCACCTGGAGCAAACCCAAACAACGCA...CACAGTGTAGAGTTGAGTGGAAGAGATTCTGGGACTTGGGAGAGGAGACAGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp AATGAAGCTGAAGGAATCGAGTGGGAGGGACTGTTCTCCTCTTTGGGGGAGCTCTGCGTTGTTTGGGTTTaGTCCAGGTGCTGTGCAGGG +
Preference number: 4 (lower is better)
Translates to: NEAEGIEWEGLFSSLGELCVVWV*SRCCAG
Trigger: CCCTGCACAGCACCTGGAGCAAACCCAAACAACGCA...GAGCTCCCCCAAAGAGGAGAACAGTCCCTCCCACTCGATTCCTTCAGCTTCATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp AACTTTTACAGCCACCCCTCTGGGAGTTGTACACACCTTTCAGTAGCCGAAGGGGTCCCACTCTCACTCTaGAGCAGCGCTCCTGTCACT +
Preference number: 4 (lower is better)
Translates to: NFYSHPSGSCTHLSVAEGVPLSL*SSAPVT
Trigger: AGTGACAGGAGCGCTGCTGCAGAGTGAGAGTGGGAC...CCCTTCGGCTACTGAAAGGTGTGTACAACTCCCAGAGGGGTGGCTGTAAAAGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp CTTTGGTGGAAAAGACCCGGCACCTCCACACTCTCCACACTCGAGACTTGCAGACCAGCCTGTGGTCGATaGTCCTGTATCATCCATCTC +
Preference number: 4 (lower is better)
Translates to: LWWKRPGTSTLSTLETCRPACGR*SCIIHL
Trigger: GAGATGGATGATACAGGAGCATCGACCACAGGCTGG...TCTGCAAGTCTCGAGTGTGGAGAGTGTGGAGGTGCCGGGTCTTTTCCACCAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR GCA 90 bp CAAAGGGTAAAAGCGTGCTGCCCGCTCTGCACACGGCAGAAGCTGGAAAATGCCGAAGAATTTAGTGGCTaGACGGGTGTGTGCAGACCT +
Preference number: 4 (lower is better)
Translates to: QRVKACCPLCTRQKLENAEEFSG*TGVCRP
Trigger: AGGTCTGCACACACCCGTGCAGCCACTAAATTCTTC...GGCATTTTCCAGCTTCTGCCGTGTGCAGAGCGGGCAGCACGCTTTTACCCTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp CCGGCACCTCCACACTCTCCACACTCGAGACTTGCAGATGCACGTGTGACGGTGCAAGAGAAGCTGACATaGCAACTGAAACTGGGGAAT +
Preference number: 4 (lower is better)
Translates to: PAPPHSPHSRLADARVTVQEKLT*QLKLGN
Trigger: ATTCCCCAGTTTCAGTTGGCATGTCAGCTTCTCTTG...CACCGTCACACGTGCATCTGCAAGTCTCGAGTGTGGAGAGTGTGGAGGTGCCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR GCA 90 bp CTTTGGTGGAAAAGACCCGGCACCTCCACACTCTCCACACTCGAGACTTGCAGAATTCGAGCCAGCTGCTaGTCTTGCTGTTGGCGTACA +
Preference number: 4 (lower is better)
Translates to: LWWKRPGTSTLSTLETCRIRASC*SCCWRT
Trigger: TGTACGCCAACAGCAAGAGCAGCAGCTGGCTCGAAT...TCTGCAAGTCTCGAGTGTGGAGAGTGTGGAGGTGCCGGGTCTTTTCCACCAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR GCA 90 bp CCCCTGTCTCCTCTCCCAAGTCCCAGAATCTCTTCCACTCAACTCTACACTGTGATCGGGGTGCTGTGCTaGTCCAGGGAGATGATGGTT +
Preference number: 4 (lower is better)
Translates to: PLSPLPSPRISSTQLYTVIGVLC*SREMMV
Trigger: AACCATCATCTCCCTGGAGCAGCACAGCACCCCGAT...CACAGTGTAGAGTTGAGTGGAAGAGATTCTGGGACTTGGGAGAGGAGACAGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp CTTTGGTGGAAAAGACCCGGCACCTCCACACTCTCCACACTCGAGACTTGCAGAAGCAGTGGGCCATGCTaGATGCAGATCGTTCTCAAG +
Preference number: 4 (lower is better)
Translates to: LWWKRPGTSTLSTLETCRSSGPC*MQIVLK
Trigger: CTTGAGAACGATCTGCATGCAGCATGGCCCACTGCT...TCTGCAAGTCTCGAGTGTGGAGAGTGTGGAGGTGCCGGGTCTTTTCCACCAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR GCA 90 bp TCCCTAATGACTAAAGCTGACCGTCTGTTTGTTTGTATCCAACGGATAGCTTCTCCGGTCTCCAGCGACTaGCACCCCGCAGCTGGCGCA +
Preference number: 4 (lower is better)
Translates to: SLMTKADRLFVCIQRIASPVSSD*HPAAGA
Trigger: TGCGCCAGCTGCGGGGTGGCAGTCGCTGGAGACCGG...AGAAGCTATCCGTTGGATACAAACAAACAGACGGTCAGCTTTAGTCATTAGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp GGATTTTTGCTGTACCTTCCTGTTACCTGTTTGTGTGCAAAGTTGGAAAGCTGCCAAGATCGGCCCCGCTaGTGCCACCAGCGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: GFLLYLPVTCLCAKLESCQDRPR*CHQRCC
Trigger: GCAGCAGCGCTGGTGGCAGCAGCGGGGCCGATCTTG...GCAGCTTTCCAACTTTGCACACAAACAGGTAACAGGAAGGTACAGCAAAAATCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp AACTGCAGGCCCCCTGGAATTTACCTGGCCATCAGACCTGCCAGCAACAGTGGCAGGGAGGCAACTATGTaGTCAGACAGTCTGTCAATG +
Preference number: 4 (lower is better)
Translates to: NCRPPGIYLAIRPASNSGREATM*SDSLSM
Trigger: CATTGACAGACTGTCTGAGCACATAGTTGCCTCCCT...GCCACTGTTGCTGGCAGGTCTGATGGCCAGGTAAATTCCAGGGGGCCTGCAGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp CAAAGGGTAAAAGCGTGCTGCCCGCTCTGCACACGGCAGAAGCTGGAAAATGCCGCAGCCCAATGGAGTTaGTTTAGTAGCAGTGGCTCT +
Preference number: 4 (lower is better)
Translates to: QRVKACCPLCTRQKLENAAAQWS*FSSSGS
Trigger: AGAGCCACTGCTACTAAAGCAACTCCATTGGGCTGC...GGCATTTTCCAGCTTCTGCCGTGTGCAGAGCGGGCAGCACGCTTTTACCCTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp AACTGCAGGCCCCCTGGAATTTACCTGGCCATCAGACCTGCCAGCAACAGTGGCTTTTGGACTTGGCAGTaGTCCACTCTACTGCTAGGT +
Preference number: 4 (lower is better)
Translates to: NCRPPGIYLAIRPASNSGFWTWQ*STLLLG
Trigger: ACCTAGCAGTAGAGTGGAGCACTGCCAAGTCCAAAA...GCCACTGTTGCTGGCAGGTCTGATGGCCAGGTAAATTCCAGGGGGCCTGCAGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp AACTGCAGGCCCCCTGGAATTTACCTGGCCATCAGACCTGCCAGCAACAGTGGCTGTCTGAATACAAGCTaGTCTTCACCTGGTGGTCAC +
Preference number: 4 (lower is better)
Translates to: NCRPPGIYLAIRPASNSGCLNTS*SSPGGH
Trigger: GTGACCACCAGGTGAAGAGCAGCTTGTATTCAGACA...GCCACTGTTGCTGGCAGGTCTGATGGCCAGGTAAATTCCAGGGGGCCTGCAGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp AACTGCAGGCCCCCTGGAATTTACCTGGCCATCAGACCTGCCAGCAACAGTGGCACCTGGAGGAATCAATaGACAGTAATGGAGGGCACA +
Preference number: 4 (lower is better)
Translates to: NCRPPGIYLAIRPASNSGTWRNQ*TVMEGT
Trigger: TGTGCCCTCCATTACTGTGCATTGATTCCTCCAGGT...GCCACTGTTGCTGGCAGGTCTGATGGCCAGGTAAATTCCAGGGGGCCTGCAGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp ACTTTCAGGTCAGCACGAGTGAAGCGTGGTTTCCTGAGCTTGAAGGGCTCTGAACAAAGGGTAAAAGCGTaGTGCCCGCTCTGCACACGG +
Preference number: 4 (lower is better)
Translates to: TFRSARVKRGFLSLKGSEQRVKA*CPLCTR
Trigger: CCGTGTGCAGAGCGGGCAGCACGCTTTTACCCTTTG...TTCAGAGCCCTTCAAGCTCAGGAAACCACGCTTCACTCGTGCTGACCTGAAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp AATGAAGCTGAAGGAATCGAGTGGGAGGGACTGTTCTCCTCTTTGGGGGAGCTCTTGCCCACACTGGAGTaGAGTGGTGCAATCTCGGCT +
Preference number: 4 (lower is better)
Translates to: NEAEGIEWEGLFSSLGELLPTLE*SGAISA
Trigger: AGCCGAGATTGCACCACTGCACTCCAGTGTGGGCAA...GAGCTCCCCCAAAGAGGAGAACAGTCCCTCCCACTCGATTCCTTCAGCTTCATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp AACTGCAGGCCCCCTGGAATTTACCTGGCCATCAGACCTGCCAGCAACAGTGGCTGCAGGGGATGGATCTaGTGGAAGAGAGAAATTCAG +
Preference number: 4 (lower is better)
Translates to: NCRPPGIYLAIRPASNSGCRGWI*WKREIQ
Trigger: CTGAATTTCTCTCTTCCAGCAGATCCATCCCCTGCA...GCCACTGTTGCTGGCAGGTCTGATGGCCAGGTAAATTCCAGGGGGCCTGCAGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp CAAAGGGTAAAAGCGTGCTGCCCGCTCTGCACACGGCAGAAGCTGGAAAATGCCAGCCTGCCATGCAAGTaGACCTCTAAAGTGCCTAGT +
Preference number: 4 (lower is better)
Translates to: QRVKACCPLCTRQKLENASLPCK*TSKVPS
Trigger: ACTAGGCACTTTAGAGGTGCACTTGCATGGCAGGCT...GGCATTTTCCAGCTTCTGCCGTGTGCAGAGCGGGCAGCACGCTTTTACCCTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp AATGAAGCTGAAGGAATCGAGTGGGAGGGACTGTTCTCCTCTTTGGGGGAGCTCAGAAGGCCCCCTAGCTaGACCCCAAGATCCAACACT +
Preference number: 4 (lower is better)
Translates to: NEAEGIEWEGLFSSLGELRRPPS*TPRSNT
Trigger: AGTGTTGGATCTTGGGGTGCAGCTAGGGGGCCTTCT...GAGCTCCCCCAAAGAGGAGAACAGTCCCTCCCACTCGATTCCTTCAGCTTCATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp CCTCCACACTCTCCACACTCGAGACTTGCAGATGCACGTGTGACGGTGCCATTCATGCTGGGGATCTTTTaGAATCCTCCCACCCACCTT +
Preference number: 4 (lower is better)
Translates to: PPHSPHSRLADARVTVPFMLGIF*NPPTHL
Trigger: AAGGTGGGTGGGAGGATTGCAAAAGATCCCCAGCAT...GAATGGCACCGTCACACGTGCATCTGCAAGTCTCGAGTGTGGAGAGTGTGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR GCA 90 bp CCCCTGTCTCCTCTCCCAAGTCCCAGAATCTCTTCCACTCAACTCTACACTGTGGGCTGCTGTGGGGGCTaGTGCTGTTGGTGTTGTTTA +
Preference number: 4 (lower is better)
Translates to: PLSPLPSPRISSTQLYTVGCCGG*CCWCCL
Trigger: TAAACAACACCAACAGCAGCAGCCCCCACAGCAGCC...CACAGTGTAGAGTTGAGTGGAAGAGATTCTGGGACTTGGGAGAGGAGACAGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp TCTGACGACTGGCCTCTGATATATACAGGACAATCCAAGCTTTGGTGGAAAAGATGTGGTGGCGGCGGCTaGTGTGGGGGCTGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: SDDWPLIYTGQSKLWWKRCGGGG*CGGCCC
Trigger: ACAGCAGCAGCCCCCACAGCAGCCGCCGCCACCACA...TCTTTTCCACCAAAGCTTGGATTGTCCTGTATATATCAGAGGCCAGTCGTCAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR GCA 90 bp CCACACTCGAGACTTGCAGATGCACGTGTGACGGTGCCATTCTTCGTATATGTTTGGAAGGTCGAACGTTaGCTGGAGGTGGTGGGGGTG +
Preference number: 4 (lower is better)
Translates to: PHSRLADARVTVPFFVYVWKVER*LEVVGV
Trigger: CACCCCCACCACCTCCAGGCAACGTTCGACCTTCCA...AACATATACGAAGAATGGCACCGTCACACGTGCATCTGCAAGTCTCGAGTGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR CCA 90 bp ACTAAAGCGGTTTTAGAGAAATTGCAGGCAGCAACCCCACCCACTCCCTTTACCACTTTGTGGTCCTGCTaGCAACGGAATCGCGGCGGC +
Preference number: 4 (lower is better)
Translates to: TKAVLEKLQAATPPTPFTTLWSC*QRNRGG
Trigger: GCCGCCGCGATTCCGTTGCCAGCAGGACCACAAAGT...GGTAAAGGGAGTGGGTGGGGTTGCTGCCTGCAATTTCTCTAAAACCGCTTTAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp CTTTGGTGGAAAAGACCCGGCACCTCCACACTCTCCACACTCGAGACTTGCAGATGTTCCCCCAGCCTGTaGTCGATGCTCCTGTATCAT +
Preference number: 4 (lower is better)
Translates to: LWWKRPGTSTLSTLETCRCSPSL*SMLLYH
Trigger: ATGATACAGGAGCATCGACCACAGGCTGGGGGAACA...TCTGCAAGTCTCGAGTGTGGAGAGTGTGGAGGTGCCGGGTCTTTTCCACCAAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR CCA 90 bp AACTGCAGGCCCCCTGGAATTTACCTGGCCATCAGACCTGCCAGCAACAGTGGCATTGAGGCAGAAACCTaGGGGGAAATAAACTGGGGA +
Preference number: 4 (lower is better)
Translates to: NCRPPGIYLAIRPASNSGIEAET*GEINWG
Trigger: TCCCCAGTTTATTTCCCCCCAGGTTTCTGCCTCAAT...GCCACTGTTGCTGGCAGGTCTGATGGCCAGGTAAATTCCAGGGGGCCTGCAGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp CCGGCACCTCCACACTCTCCACACTCGAGACTTGCAGATGCACGTGTGACGGTGGGAATTTGTGGAAGCTaGCTCAGCATGGCAATTTGT +
Preference number: 4 (lower is better)
Translates to: PAPPHSPHSRLADARVTVGICGS*LSMAIC
Trigger: ACAAATTGCCATGCTGAGCCAGCTTCCACAAATTCC...CACCGTCACACGTGCATCTGCAAGTCTCGAGTGTGGAGAGTGTGGAGGTGCCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR CCA 90 bp CAAAGGGTAAAAGCGTGCTGCCCGCTCTGCACACGGCAGAAGCTGGAAAATGCCAAACTGGGGAATTTGTaGAAGCTGGCTCAGCATGGC +
Preference number: 4 (lower is better)
Translates to: QRVKACCPLCTRQKLENAKLGNL*KLAQHG
Trigger: GCCATGCTGAGCCAGCTTCCACAAATTCCCCAGTTT...GGCATTTTCCAGCTTCTGCCGTGTGCAGAGCGGGCAGCACGCTTTTACCCTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp CCCCTGTCTCCTCTCCCAAGTCCCAGAATCTCTTCCACTCAACTCTACACTGTGTATTGGCTTCCTGTGTaGCTACAGAGGGCAGCCCCT +
Preference number: 4 (lower is better)
Translates to: PLSPLPSPRISSTQLYTVYWLPV*LQRAAP
Trigger: AGGGGCTGCCCTCTGTAGCCACACAGGAAGCCAATA...CACAGTGTAGAGTTGAGTGGAAGAGATTCTGGGACTTGGGAGAGGAGACAGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp CCCGGCACCTCCACACTCTCCACACTCGAGACTTGCAGATGCACGTGTGACGGTATTCTGGAGGCCAACTaGCATTGCTGGATTTACTTC +
Preference number: 4 (lower is better)
Translates to: PGTSTLSTLETCRCTCDGILEAN*HCWIYF
Trigger: GAAGTAAATCCAGCAATGCCAGTTGGCCTCCAGAAT...ACCGTCACACGTGCATCTGCAAGTCTCGAGTGTGGAGAGTGTGGAGGTGCCGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR CCA 90 bp CTCTCCACACTCGAGACTTGCAGATGCACGTGTGACGGTGCCATTCTTCGTATACCCCAGCACACTTCCTaGGGTGACATAGGGGTCAGA +
Preference number: 4 (lower is better)
Translates to: LSTLETCRCTCDGAILRIPQHTS*GDIGVR
Trigger: TCTGACCCCTATGTCACCCCAGGAAGTGTGCTGGGG...TATACGAAGAATGGCACCGTCACACGTGCATCTGCAAGTCTCGAGTGTGGAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR CCA 90 bp CACACACATGTGCGTCCCCCTTGCTCAGGATGTCTGGGTGTATGTACGAAGGCATGGGGTTGTGTCCTATaGGATCTGGGGACCATGTTG +
Preference number: 4 (lower is better)
Translates to: HTHVRPPCSGCLGVCTKAWGCVL*DLGTML
Trigger: CAACATGGTCCCCAGATCCCATAGGACACAACCCCA...TGCCTTCGTACATACACCCAGACATCCTGAGCAAGGGGGACGCACATGTGTGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp AACTGCAGGCCCCCTGGAATTTACCTGGCCATCAGACCTGCCAGCAACAGTGGCTGTTGGAGAGATGAGTaGGGTTGTGTCCTATGGGAT +
Preference number: 4 (lower is better)
Translates to: NCRPPGIYLAIRPASNSGCWRDE*GCVLWD
Trigger: ATCCCATAGGACACAACCCCACTCATCTCTCCAACA...GCCACTGTTGCTGGCAGGTCTGATGGCCAGGTAAATTCCAGGGGGCCTGCAGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp ACTTTCAGGTCAGCACGAGTGAAGCGTGGTTTCCTGAGCTTGAAGGGCTCTGAAATGTGCAGTGCAGTTTaGGCCTTGGCCGCCTCCTGT +
Preference number: 4 (lower is better)
Translates to: TFRSARVKRGFLSLKGSEMCSAV*ALAASC
Trigger: ACAGGAGGCGGCCAAGGCCCAAACTGCACTGCACAT...TTCAGAGCCCTTCAAGCTCAGGAAACCACGCTTCACTCGTGCTGACCTGAAAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp GGATTTTTGCTGTACCTTCCTGTTACCTGTTTGTGTGCAAAGTTGGAAAGCTGCCTGCCACCCCGCAGCTaGCGCACTTGGGGTTGCTGC +
Preference number: 4 (lower is better)
Translates to: GFLLYLPVTCLCAKLESCLPPRS*RTWGCC
Trigger: GCAGCAACCCCAAGTGCGCCAGCTGCGGGGTGGCAG...GCAGCTTTCCAACTTTGCACACAAACAGGTAACAGGAAGGTACAGCAAAAATCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp ACTAAAGCGGTTTTAGAGAAATTGCAGGCAGCAACCCCACCCACTCCCTTTACCGGGCTGCCCATCCTATaGGGATCTTCCACCGTTGGG +
Preference number: 4 (lower is better)
Translates to: TKAVLEKLQAATPPTPFTGLPIL*GSSTVG
Trigger: CCCAACGGTGGAAGATCCCCATAGGATGGGCAGCCC...GGTAAAGGGAGTGGGTGGGGTTGCTGCCTGCAATTTCTCTAAAACCGCTTTAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp ATGCGGGCAGTGTGGGTGCTGAGCTGCTGGAGGAGTAGCTCTCCACTCCCTGACCTTAATGCAGCCCAATaGAGTTGCTTTAGTAGCAGT +
Preference number: 4 (lower is better)
Translates to: MRAVWVLSCWRSSSPLPDLNAAQ*SCFSSS
Trigger: ACTGCTACTAAAGCAACTCCATTGGGCTGCATTAAG...GTCAGGGAGTGGAGAGCTACTCCTCCAGCAGCTCAGCACCCACACTGCCCGCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp CAAAGGGTAAAAGCGTGCTGCCCGCTCTGCACACGGCAGAAGCTGGAAAATGCCCACCAAGGGTTGGAATaGGCAGGTATTTGCTGGTAC +
Preference number: 4 (lower is better)
Translates to: QRVKACCPLCTRQKLENAHQGLE*AGICWY
Trigger: GTACCAGCAAATACCTGCCCATTCCAACCCTTGGTG...GGCATTTTCCAGCTTCTGCCGTGTGCAGAGCGGGCAGCACGCTTTTACCCTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp CACACACATGTGCGTCCCCCTTGCTCAGGATGTCTGGGTGTATGTACGAAGGCAGCTCCCACCAAGGGTTaGAATGGGCAGGTATTTGCT +
Preference number: 4 (lower is better)
Translates to: HTHVRPPCSGCLGVCTKAAPTKG*NGQVFA
Trigger: AGCAAATACCTGCCCATTCCAACCCTTGGTGGGAGC...TGCCTTCGTACATACACCCAGACATCCTGAGCAAGGGGGACGCACATGTGTGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp ACTTTCAGGTCAGCACGAGTGAAGCGTGGTTTCCTGAGCTTGAAGGGCTCTGAAAAGCTGCTCTTCACCTaGTGGTCACCGCACGACAGC +
Preference number: 4 (lower is better)
Translates to: TFRSARVKRGFLSLKGSEKLLFT*WSPHDS
Trigger: GCTGTCGTGCGGTGACCACCAGGTGAAGAGCAGCTT...TTCAGAGCCCTTCAAGCTCAGGAAACCACGCTTCACTCGTGCTGACCTGAAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp AACTTTTACAGCCACCCCTCTGGGAGTTGTACACACCTTTCAGTAGCCGAAGGGTCAGCCCACTGCCTTTaGGGCCTGTCCAGAACCACT +
Preference number: 4 (lower is better)
Translates to: NFYSHPSGSCTHLSVAEGSAHCL*GLSRTT
Trigger: AGTGGTTCTGGACAGGCCCCAAAGGCAGTGGGCTGA...CCCTTCGGCTACTGAAAGGTGTGTACAACTCCCAGAGGGGTGGCTGTAAAAGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp CACACACATGTGCGTCCCCCTTGCTCAGGATGTCTGGGTGTATGTACGAAGGCACAGAGGTCCTCTGTCTaGTGTGAGACACCCCTTTCT +
Preference number: 4 (lower is better)
Translates to: HTHVRPPCSGCLGVCTKAQRSSV*CETPLS
Trigger: AGAAAGGGGTGTCTCACACCAGACAGAGGACCTCTG...TGCCTTCGTACATACACCCAGACATCCTGAGCAAGGGGGACGCACATGTGTGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp ATGCGGGCAGTGTGGGTGCTGAGCTGCTGGAGGAGTAGCTCTCCACTCCCTGACAGAGAAAAACAGGCTTaGCGTAAGCATTTTGCTCAG +
Preference number: 4 (lower is better)
Translates to: MRAVWVLSCWRSSSPLPDREKQA*RKHFAQ
Trigger: CTGAGCAAAATGCTTACGCCAAGCCTGTTTTTCTCT...GTCAGGGAGTGGAGAGCTACTCCTCCAGCAGCTCAGCACCCACACTGCCCGCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp ACTAAAGCGGTTTTAGAGAAATTGCAGGCAGCAACCCCACCCACTCCCTTTACCCAATCACTCGGGATCTaGTCCCGGTGGCCACACGCA +
Preference number: 4 (lower is better)
Translates to: TKAVLEKLQAATPPTPFTQSLGI*SRWPHA
Trigger: TGCGTGTGGCCACCGGGACCAGATCCCGAGTGATTG...GGTAAAGGGAGTGGGTGGGGTTGCTGCCTGCAATTTCTCTAAAACCGCTTTAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp CAAAGGGTAAAAGCGTGCTGCCCGCTCTGCACACGGCAGAAGCTGGAAAATGCCTTACAGCCACCCCTCTaGGAGTTGTACACACCTTTC +
Preference number: 4 (lower is better)
Translates to: QRVKACCPLCTRQKLENALQPPL*ELYTPF
Trigger: GAAAGGTGTGTACAACTCCCAGAGGGGTGGCTGTAA...GGCATTTTCCAGCTTCTGCCGTGTGCAGAGCGGGCAGCACGCTTTTACCCTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp CCCCTGTCTCCTCTCCCAAGTCCCAGAATCTCTTCCACTCAACTCTACACTGTGGAACTGCAGGCCCCCTaGAATTTACCTGGCCATCAG +
Preference number: 4 (lower is better)
Translates to: PLSPLPSPRISSTQLYTVELQAP*NLPGHQ
Trigger: CTGATGGCCAGGTAAATTCCAGGGGGCCTGCAGTTC...CACAGTGTAGAGTTGAGTGGAAGAGATTCTGGGACTTGGGAGAGGAGACAGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp CACACACATGTGCGTCCCCCTTGCTCAGGATGTCTGGGTGTATGTACGAAGGCAAGCACGAGTGAAGCGTaGTTTCCTGAGCTTGAAGGG +
Preference number: 4 (lower is better)
Translates to: HTHVRPPCSGCLGVCTKASTSEA*FPELEG
Trigger: CCCTTCAAGCTCAGGAAACCACGCTTCACTCGTGCT...TGCCTTCGTACATACACCCAGACATCCTGAGCAAGGGGGACGCACATGTGTGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp ACTTTCAGGTCAGCACGAGTGAAGCGTGGTTTCCTGAGCTTGAAGGGCTCTGAACACACTGGAGTGCAGTaGTGCAATCTCGGCTCACCG +
Preference number: 4 (lower is better)
Translates to: TFRSARVKRGFLSLKGSEHTGVQ*CNLGSP
Trigger: CGGTGAGCCGAGATTGCACCACTGCACTCCAGTGTG...TTCAGAGCCCTTCAAGCTCAGGAAACCACGCTTCACTCGTGCTGACCTGAAAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp AACTGCAGGCCCCCTGGAATTTACCTGGCCATCAGACCTGCCAGCAACAGTGGCATACACTTTGGTCACTaGTGTGTGCAAAGGGTGGTG +
Preference number: 4 (lower is better)
Translates to: NCRPPGIYLAIRPASNSGIHFGH*CVQRVV
Trigger: CACCACCCTTTGCACACACCAGTGACCAAAGTGTAT...GCCACTGTTGCTGGCAGGTCTGATGGCCAGGTAAATTCCAGGGGGCCTGCAGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp CACACACATGTGCGTCCCCCTTGCTCAGGATGTCTGGGTGTATGTACGAAGGCAAGATGTGAATTGGGTTaGGGGAGGTGCCGTTGTTGG +
Preference number: 4 (lower is better)
Translates to: HTHVRPPCSGCLGVCTKARCELG*GRCRCW
Trigger: CCAACAACGGCACCTCCCCCAACCCAATTCACATCT...TGCCTTCGTACATACACCCAGACATCCTGAGCAAGGGGGACGCACATGTGTGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp CCACACTCGAGACTTGCAGATGCACGTGTGACGGTGCCATTCTTCGTATATGTTGCCTGGGCATTGCCTTaGTTTTCAGGGAGGGGGTGG +
Preference number: 4 (lower is better)
Translates to: PHSRLADARVTVPFFVYVAWALP*FSGRGW
Trigger: CCACCCCCTCCCTGAAAACCAAGGCAATGCCCAGGC...AACATATACGAAGAATGGCACCGTCACACGTGCATCTGCAAGTCTCGAGTGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR CCA 90 bp AATGAAGCTGAAGGAATCGAGTGGGAGGGACTGTTCTCCTCTTTGGGGGAGCTCCCCCAACAGGGAGCCTaGGCATTGCCTTGGTTTTCA +
Preference number: 4 (lower is better)
Translates to: NEAEGIEWEGLFSSLGELPQQGA*ALPWFS
Trigger: TGAAAACCAAGGCAATGCCCAGGCTCCCTGTTGGGG...GAGCTCCCCCAAAGAGGAGAACAGTCCCTCCCACTCGATTCCTTCAGCTTCATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp CACACACATGTGCGTCCCCCTTGCTCAGGATGTCTGGGTGTATGTACGAAGGCATTTCCCCTCAGGCCTTaGCACCTCTTCAATGTCCCA +
Preference number: 4 (lower is better)
Translates to: HTHVRPPCSGCLGVCTKAFPLRP*HLFNVP
Trigger: TGGGACATTGAAGAGGTGCCAAGGCCTGAGGGGAAA...TGCCTTCGTACATACACCCAGACATCCTGAGCAAGGGGGACGCACATGTGTGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp ACTTTCAGGTCAGCACGAGTGAAGCGTGGTTTCCTGAGCTTGAAGGGCTCTGAAAGTTCTTGGTCTGTGTaGCAGCGCTCTCCCACCCCT +
Preference number: 4 (lower is better)
Translates to: TFRSARVKRGFLSLKGSESSWSV*QRSPTP
Trigger: AGGGGTGGGAGAGCGCTGCCACACAGACCAAGAACT...TTCAGAGCCCTTCAAGCTCAGGAAACCACGCTTCACTCGTGCTGACCTGAAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp GCAGCTGCCAGAATACTCACGGGTGCATCTTCATGCATGTTTGTCTACGTGGGTAGTTCTTGGTCTGTGTaGCAGCGCTCTCCCACCCCT +
Preference number: 4 (lower is better)
Translates to: AAARILTGASSCMFVYVGSSWSV*QRSPTP
Trigger: AGGGGTGGGAGAGCGCTGCCACACAGACCAAGAACT...ACCCACGTAGACAAACATGCATGAAGATGCACCCGTGAGTATTCTGGCAGCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR CCA 90 bp CAAAGGGTAAAAGCGTGCTGCCCGCTCTGCACACGGCAGAAGCTGGAAAATGCCGTTTATTCCAGGAATTaGGCTGTCGGCCCGTCTCAT +
Preference number: 4 (lower is better)
Translates to: QRVKACCPLCTRQKLENAVYSRN*AVGPSH
Trigger: ATGAGACGGGCCGACAGCCCAATTCCTGGAATAAAC...GGCATTTTCCAGCTTCTGCCGTGTGCAGAGCGGGCAGCACGCTTTTACCCTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp AACTGCAGGCCCCCTGGAATTTACCTGGCCATCAGACCTGCCAGCAACAGTGGCGGCACCCATCTTGATTaGAGAAAGGCAAAGTCAGCT +
Preference number: 4 (lower is better)
Translates to: NCRPPGIYLAIRPASNSGGTHLD*RKAKSA
Trigger: AGCTGACTTTGCCTTTCTCCAATCAAGATGGGTGCC...GCCACTGTTGCTGGCAGGTCTGATGGCCAGGTAAATTCCAGGGGGCCTGCAGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000454349.7
CDS-3UTR CCA 90 bp ACTTTCAGGTCAGCACGAGTGAAGCGTGGTTTCCTGAGCTTGAAGGGCTCTGAACTAGCAGCGAAGTTTTaGGGGTTGAGCCCTGTGCCG +
Preference number: 4 (lower is better)
Translates to: TFRSARVKRGFLSLKGSELAAKF*GLSPVP
Trigger: CGGCACAGGGCTCAACCCCCAAAACTTCGCTGCTAG...TTCAGAGCCCTTCAAGCTCAGGAAACCACGCTTCACTCGTGCTGACCTGAAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454349.7
CDS-3UTR TCA 90 bp GTATGCCACAATCACTCGGGATCTGGTCCCGGTGGCCACACGCATGCGGGCAGTGGATTATCTTCAGTCTaGCTCAGCAATCCCATATTT +
Preference number: 4 (lower is better)
Translates to: VCHNHSGSGPGGHTHAGSGLSSV*LSNPIF
Trigger: AAATATGGGATTGCTGAGTCAGACTGAAGATAATCC...ACTGCCCGCATGCGTGTGGCCACCGGGACCAGATCCCGAGTGATTGTGGCATAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp CAAAGGGTAAAAGCGTGCTGCCCGCTCTGCACACGGCAGAAGCTGGAAAATGCCTGTTGGGAAACTGCTTaGGCATTGAGGCAGAAACCT +
Preference number: 4 (lower is better)
Translates to: QRVKACCPLCTRQKLENACWETA*ALRQKP
Trigger: AGGTTTCTGCCTCAATGCTCAAGCAGTTTCCCAACA...GGCATTTTCCAGCTTCTGCCGTGTGCAGAGCGGGCAGCACGCTTTTACCCTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp CCCCTGTCTCCTCTCCCAAGTCCCAGAATCTCTTCCACTCAACTCTACACTGTGAGCATGGCAATTTGTTaGGGAGATAACTGGGGCCCC +
Preference number: 4 (lower is better)
Translates to: PLSPLPSPRISSTQLYTVSMAIC*GDNWGP
Trigger: GGGGCCCCAGTTATCTCCTCAACAAATTGCCATGCT...CACAGTGTAGAGTTGAGTGGAAGAGATTCTGGGACTTGGGAGAGGAGACAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp ACTTTCAGGTCAGCACGAGTGAAGCGTGGTTTCCTGAGCTTGAAGGGCTCTGAAAAACTGGTTGTACGGTaGCCCTCCCCGGGTTTTACC +
Preference number: 4 (lower is better)
Translates to: TFRSARVKRGFLSLKGSEKLVVR*PSPGFT
Trigger: GGTAAAACCCGGGGAGGGTCACCGTACAACCAGTTT...TTCAGAGCCCTTCAAGCTCAGGAAACCACGCTTCACTCGTGCTGACCTGAAAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp CAGCTGCCAGAATACTCACGGGTGCATCTTCATGCATGTTTGTCTACGTGGGTGAAACTGGTTGTACGGTaGCCCTCCCCGGGTTTTACC +
Preference number: 4 (lower is better)
Translates to: QLPEYSRVHLHACLSTWVKLVVR*PSPGFT
Trigger: GGTAAAACCCGGGGAGGGTCACCGTACAACCAGTTT...CACCCACGTAGACAAACATGCATGAAGATGCACCCGTGAGTATTCTGGCAGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR TCA 90 bp AACTTTTACAGCCACCCCTCTGGGAGTTGTACACACCTTTCAGTAGCCGAAGGGGCACACTTCCTGGGGTaGCATAGGGGTCAGATTCAG +
Preference number: 4 (lower is better)
Translates to: NFYSHPSGSCTHLSVAEGAHFLG*HRGQIQ
Trigger: CTGAATCTGACCCCTATGTCACCCCAGGAAGTGTGC...CCCTTCGGCTACTGAAAGGTGTGTACAACTCCCAGAGGGGTGGCTGTAAAAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp CCCGGCACCTCCACACTCTCCACACTCGAGACTTGCAGATGCACGTGTGACGGTATCTGGGGACCATGTTaGTTTGTAATCAGGGAACTT +
Preference number: 4 (lower is better)
Translates to: PGTSTLSTLETCRCTCDGIWGPC*FVIREL
Trigger: AAGTTCCCTGATTACAAATCAACATGGTCCCCAGAT...ACCGTCACACGTGCATCTGCAAGTCTCGAGTGTGGAGAGTGTGGAGGTGCCGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR TCA 90 bp GTATGCCACAATCACTCGGGATCTGGTCCCGGTGGCCACACGCATGCGGGCAGTACAAAAGGAAACGCTTaGAGTACACACTGGTTTAAG +
Preference number: 4 (lower is better)
Translates to: VCHNHSGSGPGGHTHAGSTKGNA*STHWFK
Trigger: CTTAAACCAGTGTGTACTTCAAGCGTTTCCTTTTGT...ACTGCCCGCATGCGTGTGGCCACCGGGACCAGATCCCGAGTGATTGTGGCATAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp CACACACATGTGCGTCCCCCTTGCTCAGGATGTCTGGGTGTATGTACGAAGGCAAAGCTCCCAGCAAGTTaGCAAAAAGAAGGGGGAGGT +
Preference number: 4 (lower is better)
Translates to: HTHVRPPCSGCLGVCTKAKLPAS*QKEGGG
Trigger: ACCTCCCCCTTCTTTTTGTCAACTTGCTGGGAGCTT...TGCCTTCGTACATACACCCAGACATCCTGAGCAAGGGGGACGCACATGTGTGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp CACACACATGTGCGTCCCCCTTGCTCAGGATGTCTGGGTGTATGTACGAAGGCAGTCCTCTGTCTGGTGTaGGACACCCCTTTCTCTATT +
Preference number: 4 (lower is better)
Translates to: HTHVRPPCSGCLGVCTKAVLCLV*DTPFSI
Trigger: AATAGAGAAAGGGGTGTCTCACACCAGACAGAGGAC...TGCCTTCGTACATACACCCAGACATCCTGAGCAAGGGGGACGCACATGTGTGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp TCTGAACCAAGAAAGGTTGAGAGCTCCAGGTATTGTGTGGAGAACATTCTGGAGGGGCAGTGTGGGTGCTaGGCTGCTGGAGGAGTAGCT +
Preference number: 4 (lower is better)
Translates to: SEPRKVESSRYCVENILEGQCGC*AAGGVA
Trigger: AGCTACTCCTCCAGCAGCTCAGCACCCACACTGCCC...CTCCAGAATGTTCTCCACACAATACCTGGAGCTCTCAACCTTTCTTGGTTCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp CACACACATGTGCGTCCCCCTTGCTCAGGATGTCTGGGTGTATGTACGAAGGCAAACAGCAACGTGATGTaGCGCCCATGTGGGAATGTA +
Preference number: 4 (lower is better)
Translates to: HTHVRPPCSGCLGVCTKANSNVM*RPCGNV
Trigger: TACATTCCCACATGGGCGTCACATCACGTTGCTGTT...TGCCTTCGTACATACACCCAGACATCCTGAGCAAGGGGGACGCACATGTGTGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp AACTTTTACAGCCACCCCTCTGGGAGTTGTACACACCTTTCAGTAGCCGAAGGGGCATCAACAGCAACGTaGTGTGACGCCCATGTGGGA +
Preference number: 4 (lower is better)
Translates to: NFYSHPSGSCTHLSVAEGASTAT*CDAHVG
Trigger: TCCCACATGGGCGTCACATCACGTTGCTGTTGATGC...CCCTTCGGCTACTGAAAGGTGTGTACAACTCCCAGAGGGGTGGCTGTAAAAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp CCCCTGTCTCCTCTCCCAAGTCCCAGAATCTCTTCCACTCAACTCTACACTGTGTCTTTGGGGGAGCTCTaGGGAATCATGGAAATGGCC +
Preference number: 4 (lower is better)
Translates to: PLSPLPSPRISSTQLYTVSLGEL*GIMEMA
Trigger: GGCCATTTCCATGATTCCTCAGAGCTCCCCCAAAGA...CACAGTGTAGAGTTGAGTGGAAGAGATTCTGGGACTTGGGAGAGGAGACAGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp ATGCGGGCAGTGTGGGTGCTGAGCTGCTGGAGGAGTAGCTCTCCACTCCCTGACCTCGTTACAGTACTGTaGACGTCAACAAGAAGAATT +
Preference number: 4 (lower is better)
Translates to: MRAVWVLSCWRSSSPLPDLVTVL*TSTRRI
Trigger: AATTCTTCTTGTTGACGTTCACAGTACTGTAACGAG...GTCAGGGAGTGGAGAGCTACTCCTCCAGCAGCTCAGCACCCACACTGCCCGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp AACTGCAGGCCCCCTGGAATTTACCTGGCCATCAGACCTGCCAGCAACAGTGGCGCTGACAGATCCACATaGGCAGCATTTGTTAAAAGC +
Preference number: 4 (lower is better)
Translates to: NCRPPGIYLAIRPASNSGADRST*AAFVKS
Trigger: GCTTTTAACAAATGCTGCTCATGTGGATCTGTCAGC...GCCACTGTTGCTGGCAGGTCTGATGGCCAGGTAAATTCCAGGGGGCCTGCAGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp AACTTTTACAGCCACCCCTCTGGGAGTTGTACACACCTTTCAGTAGCCGAAGGGGTGCACGTGTCTCTGTaGGCACATTCACGGTGCATG +
Preference number: 4 (lower is better)
Translates to: NFYSHPSGSCTHLSVAEGVHVSL*AHSRCM
Trigger: CATGCACCGTGAATGTGCTCACAGAGACACGTGCAC...CCCTTCGGCTACTGAAAGGTGTGTACAACTCCCAGAGGGGTGGCTGTAAAAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp CACACACATGTGCGTCCCCCTTGCTCAGGATGTCTGGGTGTATGTACGAAGGCACCTCCTGCGTCTCTGTaGAGTGACTCCCATTATTCA +
Preference number: 4 (lower is better)
Translates to: HTHVRPPCSGCLGVCTKAPPASL*SDSHYS
Trigger: TGAATAATGGGAGTCACTTCACAGAGACGCAGGAGG...TGCCTTCGTACATACACCCAGACATCCTGAGCAAGGGGGACGCACATGTGTGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp TGTGCACGTGTCTCTGTGAGCACATTCACGGTGCATGCACCATTTTTGATGTCTAGCACCTCCAAGGGTTaGGTCTGGCGCAGTCCCACT +
Preference number: 4 (lower is better)
Translates to: CARVSVSTFTVHAPFLMSSTSKG*VWRSPT
Trigger: AGTGGGACTGCGCCAGACTCAACCCTTGGAGGTGCT...AGACATCAAAAATGGTGCATGCACCGTGAATGTGCTCACAGAGACACGTGCACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp AACTGCAGGCCCCCTGGAATTTACCTGGCCATCAGACCTGCCAGCAACAGTGGCGGAATTTGCATAATTTaGAGCAGCAGCACCTCCAAG +
Preference number: 4 (lower is better)
Translates to: NCRPPGIYLAIRPASNSGGICII*SSSTSK
Trigger: CTTGGAGGTGCTGCTGCTTCAAATTATGCAAATTCC...GCCACTGTTGCTGGCAGGTCTGATGGCCAGGTAAATTCCAGGGGGCCTGCAGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp ACTTTCAGGTCAGCACGAGTGAAGCGTGGTTTCCTGAGCTTGAAGGGCTCTGAAACCTTGTCCCAGATGTaGATTGGGTTGGGGGAGGTG +
Preference number: 4 (lower is better)
Translates to: TFRSARVKRGFLSLKGSETLSQM*IGLGEV
Trigger: CACCTCCCCCAACCCAATTCACATCTGGGACAAGGT...TTCAGAGCCCTTCAAGCTCAGGAAACCACGCTTCACTCGTGCTGACCTGAAAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp AATGAAGCTGAAGGAATCGAGTGGGAGGGACTGTTCTCCTCTTTGGGGGAGCTCATCTCCAGTGCTTTGTaGAGGGGCATCAGTGCTCCT +
Preference number: 4 (lower is better)
Translates to: NEAEGIEWEGLFSSLGELISSAL*RGISAP
Trigger: AGGAGCACTGATGCCCCTTCACAAAGCACTGGAGAT...GAGCTCCCCCAAAGAGGAGAACAGTCCCTCCCACTCGATTCCTTCAGCTTCATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp CCTCCACACTCTCCACACTCGAGACTTGCAGATGCACGTGTGACGGTGCCATTCCATTTTCCGACTAATTaGCTGTGGGGATGGCTCTTC +
Preference number: 4 (lower is better)
Translates to: PPHSPHSRLADARVTVPFHFPTN*LWGWLF
Trigger: GAAGAGCCATCCCCACAGTCAATTAGTCGGAAAATG...GAATGGCACCGTCACACGTGCATCTGCAAGTCTCGAGTGTGGAGAGTGTGGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR GCA 90 bp AACTTTTACAGCCACCCCTCTGGGAGTTGTACACACCTTTCAGTAGCCGAAGGGGACGGTGGAGGGGGCTaGCCACGTTTTAGTAACACT +
Preference number: 4 (lower is better)
Translates to: NFYSHPSGSCTHLSVAEGDGGGG*PRFSNT
Trigger: AGTGTTACTAAAACGTGGGCAGCCCCCTCCACCGTC...CCCTTCGGCTACTGAAAGGTGTGTACAACTCCCAGAGGGGTGGCTGTAAAAGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp ACTTTCAGGTCAGCACGAGTGAAGCGTGGTTTCCTGAGCTTGAAGGGCTCTGAAACCATTCGAGCCAGCTaGTGCTCTTGCTGTTGGCGT +
Preference number: 4 (lower is better)
Translates to: TFRSARVKRGFLSLKGSETIRAS*CSCCWR
Trigger: ACGCCAACAGCAAGAGCAGCAGCTGGCTCGAATGGT...TTCAGAGCCCTTCAAGCTCAGGAAACCACGCTTCACTCGTGCTGACCTGAAAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp GCAGCTGCCAGAATACTCACGGGTGCATCTTCATGCATGTTTGTCTACGTGGGTACCATTCGAGCCAGCTaGTGCTCTTGCTGTTGGCGT +
Preference number: 4 (lower is better)
Translates to: AAARILTGASSCMFVYVGTIRAS*CSCCWR
Trigger: ACGCCAACAGCAAGAGCAGCAGCTGGCTCGAATGGT...ACCCACGTAGACAAACATGCATGAAGATGCACCCGTGAGTATTCTGGCAGCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR GCA 90 bp AACTTTTACAGCCACCCCTCTGGGAGTTGTACACACCTTTCAGTAGCCGAAGGGTGCTGCTGCTGCTGCTaGTGCAGTGCACTCACCATT +
Preference number: 4 (lower is better)
Translates to: NFYSHPSGSCTHLSVAEGCCCCC*CSALTI
Trigger: AATGGTGAGTGCACTGCAGCAGCAGCAGCAGCAGCA...CCCTTCGGCTACTGAAAGGTGTGTACAACTCCCAGAGGGGTGGCTGTAAAAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp TCTGAACCAAGAAAGGTTGAGAGCTCCAGGTATTGTGTGGAGAACATTCTGGAGATGCCTGGCTGCCTCTaGTGCTGCTGCTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: SEPRKVESSRYCVENILEMPGCL*CCCCCC
Trigger: GCAGCAGCAGCAGCAGCAGCAGAGGCAGCCAGGCAT...CTCCAGAATGTTCTCCACACAATACCTGGAGCTCTCAACCTTTCTTGGTTCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp CACACACATGTGCGTCCCCCTTGCTCAGGATGTCTGGGTGTATGTACGAAGGCAGAGCCCCACATTCAATaGGTTGGGTACCATGTTGTC +
Preference number: 4 (lower is better)
Translates to: HTHVRPPCSGCLGVCTKAEPHIQ*VGYHVV
Trigger: GACAACATGGTACCCAACGCATTGAATGTGGGGCTC...TGCCTTCGTACATACACCCAGACATCCTGAGCAAGGGGGACGCACATGTGTGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp CAGCTGCCAGAATACTCACGGGTGCATCTTCATGCATGTTTGTCTACGTGGGTGATCGGGGTGCTGTGCTaGTCCAGGGAGATGATGGTT +
Preference number: 4 (lower is better)
Translates to: QLPEYSRVHLHACLSTWVIGVLC*SREMMV
Trigger: AACCATCATCTCCCTGGAGCAGCACAGCACCCCGAT...CACCCACGTAGACAAACATGCATGAAGATGCACCCGTGAGTATTCTGGCAGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR GCA 90 bp AATGAAGCTGAAGGAATCGAGTGGGAGGGACTGTTCTCCTCTTTGGGGGAGCTCGTGGGCCATGCTGCATaGAGATCGTTCTCAAGGTTG +
Preference number: 4 (lower is better)
Translates to: NEAEGIEWEGLFSSLGELVGHAA*RSFSRL
Trigger: CAACCTTGAGAACGATCTGCATGCAGCATGGCCCAC...GAGCTCCCCCAAAGAGGAGAACAGTCCCTCCCACTCGATTCCTTCAGCTTCATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp ACTAAAGCGGTTTTAGAGAAATTGCAGGCAGCAACCCCACCCACTCCCTTTACCCCGCCTCCTGTTTGGTaGTGTATCGGATCAGGGCAG +
Preference number: 4 (lower is better)
Translates to: TKAVLEKLQAATPPTPFTPPPVW*CIGSGQ
Trigger: CTGCCCTGATCCGATACAGCACCAAACAGGAGGCGG...GGTAAAGGGAGTGGGTGGGGTTGCTGCCTGCAATTTCTCTAAAACCGCTTTAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp TCTGAACCAAGAAAGGTTGAGAGCTCCAGGTATTGTGTGGAGAACATTCTGGAGTGGCGCACTTGGGGTTaGTGCAGGTGTAGGGGGCTG +
Preference number: 4 (lower is better)
Translates to: SEPRKVESSRYCVENILEWRTWG*CRCRGL
Trigger: CAGCCCCCTACACCTGCAGCAACCCCAAGTGCGCCA...CTCCAGAATGTTCTCCACACAATACCTGGAGCTCTCAACCTTTCTTGGTTCAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp TCCCTAATGACTAAAGCTGACCGTCTGTTTGTTTGTATCCAACGGATAGCTTCTGCGCTGCTGCTCCACTaGCCGAGCCCAGTGGACCCA +
Preference number: 4 (lower is better)
Translates to: SLMTKADRLFVCIQRIASALLLH*PSPVDP
Trigger: TGGGTCCACTGGGCTCGGGCAGTGGAGCAGCAGCGC...AGAAGCTATCCGTTGGATACAAACAAACAGACGGTCAGCTTTAGTCATTAGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp AACTGCAGGCCCCCTGGAATTTACCTGGCCATCAGACCTGCCAGCAACAGTGGCCGCCCCCTTCAGGTCTaGTATAATTCTCTTCACAAT +
Preference number: 4 (lower is better)
Translates to: NCRPPGIYLAIRPASNSGRPLQV*YNSLHN
Trigger: ATTGTGAAGAGAATTATAGCAGACCTGAAGGGGGCG...GCCACTGTTGCTGGCAGGTCTGATGGCCAGGTAAATTCCAGGGGGCCTGCAGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp GGGTTTATCTTAAAGATGGGGGCGAAGGGGGTGTCTGCAAAGAAGCAATTCAAAAGCAGGAAGAGGGCATaGTCAAGGCACCCAGCGGGG +
Preference number: 4 (lower is better)
Translates to: GFILKMGAKGVSAKKQFKSRKRA*SRHPAG
Trigger: CCCCGCTGGGTGCCTTGAGCATGCCCTCTTCCTGCT...TTTGAATTGCTTCTTTGCAGACACCCCCTTCGCCCCCATCTTTAAGATAAACCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp CACACACATGTGCGTCCCCCTTGCTCAGGATGTCTGGGTGTATGTACGAAGGCATGGAAGCAGAGCTTTTaGATGGGGAACAGTGGTGGA +
Preference number: 4 (lower is better)
Translates to: HTHVRPPCSGCLGVCTKAWKQSF*MGNSGG
Trigger: TCCACCACTGTTCCCCATGCAAAAGCTCTGCTTCCA...TGCCTTCGTACATACACCCAGACATCCTGAGCAAGGGGGACGCACATGTGTGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp ATGCGGGCAGTGTGGGTGCTGAGCTGCTGGAGGAGTAGCTCTCCACTCCCTGACTGTTATCACAGGGTCTaGACTAACTCTGGAAATCTA +
Preference number: 4 (lower is better)
Translates to: MRAVWVLSCWRSSSPLPDCYHRV*TNSGNL
Trigger: TAGATTTCCAGAGTTAGTGCAGACCCTGTGATAACA...GTCAGGGAGTGGAGAGCTACTCCTCCAGCAGCTCAGCACCCACACTGCCCGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp GTATGCCACAATCACTCGGGATCTGGTCCCGGTGGCCACACGCATGCGGGCAGTGCAGAAGCTGGAAAATaGCTTGTTTACATGCATGAA +
Preference number: 4 (lower is better)
Translates to: VCHNHSGSGPGGHTHAGSAEAGK*LVYMHE
Trigger: TTCATGCATGTAAACAAGGCATTTTCCAGCTTCTGC...ACTGCCCGCATGCGTGTGGCCACCGGGACCAGATCCCGAGTGATTGTGGCATAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp TCTGAACCAAGAAAGGTTGAGAGCTCCAGGTATTGTGTGGAGAACATTCTGGAGGCGTGCTGCCCGCTCTaGACACGGCAGAAGCTGGAA +
Preference number: 4 (lower is better)
Translates to: SEPRKVESSRYCVENILEACCPL*TRQKLE
Trigger: TTCCAGCTTCTGCCGTGTGCAGAGCGGGCAGCACGC...CTCCAGAATGTTCTCCACACAATACCTGGAGCTCTCAACCTTTCTTGGTTCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp CACACACATGTGCGTCCCCCTTGCTCAGGATGTCTGGGTGTATGTACGAAGGCAACTGAAGAACAAGGATaGAACGCTACTCCCTTCCCC +
Preference number: 4 (lower is better)
Translates to: HTHVRPPCSGCLGVCTKATEEQG*NATPFP
Trigger: GGGGAAGGGAGTAGCGTTGCATCCTTGTTCTTCAGT...TGCCTTCGTACATACACCCAGACATCCTGAGCAAGGGGGACGCACATGTGTGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp CAAAGGGTAAAAGCGTGCTGCCCGCTCTGCACACGGCAGAAGCTGGAAAATGCCAAAGAAGAGGCTGCATaGAGACCTCCCCTGTCAAAA +
Preference number: 4 (lower is better)
Translates to: QRVKACCPLCTRQKLENAKEEAA*RPPLSK
Trigger: TTTTGACAGGGGAGGTCTGCATGCAGCCTCTTCTTT...GGCATTTTCCAGCTTCTGCCGTGTGCAGAGCGGGCAGCACGCTTTTACCCTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp TGTGCACGTGTCTCTGTGAGCACATTCACGGTGCATGCACCATTTTTGATGTCTATGCCTGTGCAGCCCTaGACAGGCACGAGGAGACTG +
Preference number: 4 (lower is better)
Translates to: CARVSVSTFTVHAPFLMSMPVQP*TGTRRL
Trigger: CAGTCTCCTCGTGCCTGTGCAGGGCTGCACAGGCAT...AGACATCAAAAATGGTGCATGCACCGTGAATGTGCTCACAGAGACACGTGCACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp AATGAAGCTGAAGGAATCGAGTGGGAGGGACTGTTCTCCTCTTTGGGGGAGCTCACCCTGATAAGATCATaGCTGTGCAGCCCTGCACAG +
Preference number: 4 (lower is better)
Translates to: NEAEGIEWEGLFSSLGELTLIRS*LCSPAQ
Trigger: CTGTGCAGGGCTGCACAGGCATGATCTTATCAGGGT...GAGCTCCCCCAAAGAGGAGAACAGTCCCTCCCACTCGATTCCTTCAGCTTCATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp ACTTTCAGGTCAGCACGAGTGAAGCGTGGTTTCCTGAGCTTGAAGGGCTCTGAAACATTCTGGAGTCCCTaGAGGGGATGGATCTGCTGG +
Preference number: 4 (lower is better)
Translates to: TFRSARVKRGFLSLKGSETFWSP*RGWICW
Trigger: CCAGCAGATCCATCCCCTGCAGGGACTCCAGAATGT...TTCAGAGCCCTTCAAGCTCAGGAAACCACGCTTCACTCGTGCTGACCTGAAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp CACACACATGTGCGTCCCCCTTGCTCAGGATGTCTGGGTGTATGTACGAAGGCAGATCCATTCCAACCCTaGTTCATGGGTGCCCAAATC +
Preference number: 4 (lower is better)
Translates to: HTHVRPPCSGCLGVCTKADPFQP*FMGAQI
Trigger: GATTTGGGCACCCATGAAGCAGGGTTGGAATGGATC...TGCCTTCGTACATACACCCAGACATCCTGAGCAAGGGGGACGCACATGTGTGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp AACTGCAGGCCCCCTGGAATTTACCTGGCCATCAGACCTGCCAGCAACAGTGGCGGCGAAGGGGGTGTCTaGAAAGAAGCAATTCAAAAT +
Preference number: 4 (lower is better)
Translates to: NCRPPGIYLAIRPASNSGGEGGV*KEAIQN
Trigger: ATTTTGAATTGCTTCTTTGCAGACACCCCCTTCGCC...GCCACTGTTGCTGGCAGGTCTGATGGCCAGGTAAATTCCAGGGGGCCTGCAGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp AACTGCAGGCCCCCTGGAATTTACCTGGCCATCAGACCTGCCAGCAACAGTGGCAGTGCACCTCTAAAGTaGCTAGTTTCTGTGTCCATG +
Preference number: 4 (lower is better)
Translates to: NCRPPGIYLAIRPASNSGSAPLK*LVSVSM
Trigger: CATGGACACAGAAACTAGGCACTTTAGAGGTGCACT...GCCACTGTTGCTGGCAGGTCTGATGGCCAGGTAAATTCCAGGGGGCCTGCAGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp ACTAAAGCGGTTTTAGAGAAATTGCAGGCAGCAACCCCACCCACTCCCTTTACCGGGCCCAGCCTGCCATaGAAGTGCACCTCTAAAGTG +
Preference number: 4 (lower is better)
Translates to: TKAVLEKLQAATPPTPFTGPSLP*KCTSKV
Trigger: CACTTTAGAGGTGCACTTGCATGGCAGGCTGGGCCC...GGTAAAGGGAGTGGGTGGGGTTGCTGCCTGCAATTTCTCTAAAACCGCTTTAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp ATGCGGGCAGTGTGGGTGCTGAGCTGCTGGAGGAGTAGCTCTCCACTCCCTGACATTATCTGTTTCCAATaGCCCTTTCCTAGAAGTTCC +
Preference number: 4 (lower is better)
Translates to: MRAVWVLSCWRSSSPLPDIICFQ*PFPRSS
Trigger: GGAACTTCTAGGAAAGGGGCATTGGAAACAGATAAT...GTCAGGGAGTGGAGAGCTACTCCTCCAGCAGCTCAGCACCCACACTGCCCGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp ACTAAAGCGGTTTTAGAGAAATTGCAGGCAGCAACCCCACCCACTCCCTTTACCGTGAAGGGGCATCAGTaGTCCTGGAGGTGTTCCCCA +
Preference number: 4 (lower is better)
Translates to: TKAVLEKLQAATPPTPFTVKGHQ*SWRCSP
Trigger: TGGGGAACACCTCCAGGAGCACTGATGCCCCTTCAC...GGTAAAGGGAGTGGGTGGGGTTGCTGCCTGCAATTTCTCTAAAACCGCTTTAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp CACACACATGTGCGTCCCCCTTGCTCAGGATGTCTGGGTGTATGTACGAAGGCATGCTGTGGGGGCTGCTaGTGTTGGTGTTGTTTATTC +
Preference number: 4 (lower is better)
Translates to: HTHVRPPCSGCLGVCTKACCGGC*CWCCLF
Trigger: GAATAAACAACACCAACAGCAGCAGCCCCCACAGCA...TGCCTTCGTACATACACCCAGACATCCTGAGCAAGGGGGACGCACATGTGTGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp CTCTCCACACTCGAGACTTGCAGATGCACGTGTGACGGTGCCATTCTTCGTATAGGCTGCTGTGGGGGCTaGTGCTGTTGGTGTTGTTTA +
Preference number: 4 (lower is better)
Translates to: LSTLETCRCTCDGAILRIGCCGG*CCWCCL
Trigger: TAAACAACACCAACAGCAGCAGCCCCCACAGCAGCC...TATACGAAGAATGGCACCGTCACACGTGCATCTGCAAGTCTCGAGTGTGGAGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR GCA 90 bp TCCCTAATGACTAAAGCTGACCGTCTGTTTGTTTGTATCCAACGGATAGCTTCTTGTGGTGGCGGCGGCTaGTGTGGGGGCTGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: SLMTKADRLFVCIQRIASCGGGG*CGGCCC
Trigger: ACAGCAGCAGCCCCCACAGCAGCCGCCGCCACCACA...AGAAGCTATCCGTTGGATACAAACAAACAGACGGTCAGCTTTAGTCATTAGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp AATGAAGCTGAAGGAATCGAGTGGGAGGGACTGTTCTCCTCTTTGGGGGAGCTCCTGGAGCAGGTGGTGTaGTTTTGCTCCAGACTGATG +
Preference number: 4 (lower is better)
Translates to: NEAEGIEWEGLFSSLGELLEQVV*FCSRLM
Trigger: CATCAGTCTGGAGCAAAAGCACACCACCTGCTCCAG...GAGCTCCCCCAAAGAGGAGAACAGTCCCTCCCACTCGATTCCTTCAGCTTCATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000454349.7
CDS-3UTR CCA 90 bp CCCCTGTCTCCTCTCCCAAGTCCCAGAATCTCTTCCACTCAACTCTACACTGTGCTGGCGGCCGTTGGTTaGCTTAAACTTGGTTTCGTC +
Preference number: 4 (lower is better)
Translates to: PLSPLPSPRISSTQLYTVLAAVG*LKLGFV
Trigger: GACGAAACCAAGTTTAAGCCAACCAACGGCCGCCAG...CACAGTGTAGAGTTGAGTGGAAGAGATTCTGGGACTTGGGAGAGGAGACAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp AACTTTTACAGCCACCCCTCTGGGAGTTGTACACACCTTTCAGTAGCCGAAGGGGCCACCATTGACTGGTaGCGATGGAGAGCTGCCAAT +
Preference number: 4 (lower is better)
Translates to: NFYSHPSGSCTHLSVAEGATIDW*RWRAAN
Trigger: ATTGGCAGCTCTCCATCGCCACCAGTCAATGGTGGC...CCCTTCGGCTACTGAAAGGTGTGTACAACTCCCAGAGGGGTGGCTGTAAAAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp CCTCCACACTCTCCACACTCGAGACTTGCAGATGCACGTGTGACGGTGCCATTCATTATCTGGAGCAGGTaGTGTGCTTTTGCTCCAGAC +
Preference number: 4 (lower is better)
Translates to: PPHSPHSRLADARVTVPFIIWSR*CAFAPD
Trigger: GTCTGGAGCAAAAGCACACCACCTGCTCCAGATAAT...GAATGGCACCGTCACACGTGCATCTGCAAGTCTCGAGTGTGGAGAGTGTGGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR CCA 90 bp CACACACATGTGCGTCCCCCTTGCTCAGGATGTCTGGGTGTATGTACGAAGGCAAGGACTGCTTTCATTTaGCTCACCCCAAGCGGAAGT +
Preference number: 4 (lower is better)
Translates to: HTHVRPPCSGCLGVCTKARTAFI*LTPSGS
Trigger: ACTTCCGCTTGGGGTGAGCCAAATGAAAGCAGTCCT...TGCCTTCGTACATACACCCAGACATCCTGAGCAAGGGGGACGCACATGTGTGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301923.13
ENST00000454349.7
CDS-3UTR CCA 90 bp GGATTTTTGCTGTACCTTCCTGTTACCTGTTTGTGTGCAAAGTTGGAAAGCTGCTGGCATTGGGAGCGTTaGCGGGCGTGTTCCCCCAGC +
Preference number: 4 (lower is better)
Translates to: GFLLYLPVTCLCAKLESCWHWER*RACSPS
Trigger: GCTGGGGGAACACGCCCGCCAACGCTCCCAATGCCA...GCAGCTTTCCAACTTTGCACACAAACAGGTAACAGGAAGGTACAGCAAAAATCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000301923.13
ENST00000454349.7
CDS-3UTR CCA 90 bp CCTCCACACTCTCCACACTCGAGACTTGCAGATGCACGTGTGACGGTGCCATTCGTCTTTGGAATTAGGTaGACGGAACCCAGATCGATC +
Preference number: 4 (lower is better)
Translates to: PPHSPHSRLADARVTVPFVFGIR*TEPRSI
Trigger: GATCGATCTGGGTTCCGTCCACCTAATTCCAAAGAC...GAATGGCACCGTCACACGTGCATCTGCAAGTCTCGAGTGTGGAGAGTGTGGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR CCA 90 bp CAAAGGGTAAAAGCGTGCTGCCCGCTCTGCACACGGCAGAAGCTGGAAAATGCCATTGAGGCAGAAACCTaGGGGGAAATAAACTGGGGA +
Preference number: 4 (lower is better)
Translates to: QRVKACCPLCTRQKLENAIEAET*GEINWG
Trigger: TCCCCAGTTTATTTCCCCCCAGGTTTCTGCCTCAAT...GGCATTTTCCAGCTTCTGCCGTGTGCAGAGCGGGCAGCACGCTTTTACCCTTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp AACTGCAGGCCCCCTGGAATTTACCTGGCCATCAGACCTGCCAGCAACAGTGGCGAAGCTGGCTCAGCATaGCAATTTGTTGAGGAGATA +
Preference number: 4 (lower is better)
Translates to: NCRPPGIYLAIRPASNSGEAGSA*QFVEEI
Trigger: TATCTCCTCAACAAATTGCCATGCTGAGCCAGCTTC...GCCACTGTTGCTGGCAGGTCTGATGGCCAGGTAAATTCCAGGGGGCCTGCAGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp ACTAAAGCGGTTTTAGAGAAATTGCAGGCAGCAACCCCACCCACTCCCTTTACCTGTCCAGATGCGGCTTaGGCCCAACAGGATGAGAGG +
Preference number: 4 (lower is better)
Translates to: TKAVLEKLQAATPPTPFTCPDAA*AQQDER
Trigger: CCTCTCATCCTGTTGGGCCCAAGCCGCATCTGGACA...GGTAAAGGGAGTGGGTGGGGTTGCTGCCTGCAATTTCTCTAAAACCGCTTTAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp ACTAAAGCGGTTTTAGAGAAATTGCAGGCAGCAACCCCACCCACTCCCTTTACCCCCCAGCACACTTCCTaGGGTGACATAGGGGTCAGA +
Preference number: 4 (lower is better)
Translates to: TKAVLEKLQAATPPTPFTPQHTS*GDIGVR
Trigger: TCTGACCCCTATGTCACCCCAGGAAGTGTGCTGGGG...GGTAAAGGGAGTGGGTGGGGTTGCTGCCTGCAATTTCTCTAAAACCGCTTTAGT
53% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp CACACACATGTGCGTCCCCCTTGCTCAGGATGTCTGGGTGTATGTACGAAGGCAGGTCAGTATCTACAATaGGAGATGTGGCTGTACCCC +
Preference number: 4 (lower is better)
Translates to: HTHVRPPCSGCLGVCTKAGQYLQ*EMWLYP
Trigger: GGGGTACAGCCACATCTCCCATTGTAGATACTGACC...TGCCTTCGTACATACACCCAGACATCCTGAGCAAGGGGGACGCACATGTGTGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp CCCCTGTCTCCTCTCCCAAGTCCCAGAATCTCTTCCACTCAACTCTACACTGTGTGGGGTTGTGTCCTATaGGATCTGGGGACCATGTTG +
Preference number: 4 (lower is better)
Translates to: PLSPLPSPRISSTQLYTVWGCVL*DLGTML
Trigger: CAACATGGTCCCCAGATCCCATAGGACACAACCCCA...CACAGTGTAGAGTTGAGTGGAAGAGATTCTGGGACTTGGGAGAGGAGACAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp CAAAGGGTAAAAGCGTGCTGCCCGCTCTGCACACGGCAGAAGCTGGAAAATGCCATCAGGGCAGTGCCCTaGGTTAGATTCAGATGGAAT +
Preference number: 4 (lower is better)
Translates to: QRVKACCPLCTRQKLENAIRAVP*VRFRWN
Trigger: ATTCCATCTGAATCTAACCCAGGGCACTGCCCTGAT...GGCATTTTCCAGCTTCTGCCGTGTGCAGAGCGGGCAGCACGCTTTTACCCTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp TGTGCACGTGTCTCTGTGAGCACATTCACGGTGCATGCACCATTTTTGATGTCTGTGCAGTTTGGGCCTTaGCCGCCTCCTGTTTGGTGC +
Preference number: 4 (lower is better)
Translates to: CARVSVSTFTVHAPFLMSVQFGP*PPPVWC
Trigger: GCACCAAACAGGAGGCGGCCAAGGCCCAAACTGCAC...AGACATCAAAAATGGTGCATGCACCGTGAATGTGCTCACAGAGACACGTGCACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp TCCCTAATGACTAAAGCTGACCGTCTGTTTGTTTGTATCCAACGGATAGCTTCTCTGCCACCCCGCAGCTaGCGCACTTGGGGTTGCTGC +
Preference number: 4 (lower is better)
Translates to: SLMTKADRLFVCIQRIASLPPRS*RTWGCC
Trigger: GCAGCAACCCCAAGTGCGCCAGCTGCGGGGTGGCAG...AGAAGCTATCCGTTGGATACAAACAAACAGACGGTCAGCTTTAGTCATTAGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp CCCCTGTCTCCTCTCCCAAGTCCCAGAATCTCTTCCACTCAACTCTACACTGTGACTGCCCGAGCCCAGTaGACCCACCAAAAAGATTCA +
Preference number: 4 (lower is better)
Translates to: PLSPLPSPRISSTQLYTVTARAQ*THQKDS
Trigger: TGAATCTTTTTGGTGGGTCCACTGGGCTCGGGCAGT...CACAGTGTAGAGTTGAGTGGAAGAGATTCTGGGACTTGGGAGAGGAGACAGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp TGTGCACGTGTCTCTGTGAGCACATTCACGGTGCATGCACCATTTTTGATGTCTGGGCTGCCCATCCTATaGGGATCTTCCACCGTTGGG +
Preference number: 4 (lower is better)
Translates to: CARVSVSTFTVHAPFLMSGLPIL*GSSTVG
Trigger: CCCAACGGTGGAAGATCCCCATAGGATGGGCAGCCC...AGACATCAAAAATGGTGCATGCACCGTGAATGTGCTCACAGAGACACGTGCACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp TGTGCACGTGTCTCTGTGAGCACATTCACGGTGCATGCACCATTTTTGATGTCTCTGTCAGTGATGGCCTaGTGCTGTAACGCGCCACGG +
Preference number: 4 (lower is better)
Translates to: CARVSVSTFTVHAPFLMSLSVMA*CCNAPR
Trigger: CCGTGGCGCGTTACAGCACCAGGCCATCACTGACAG...AGACATCAAAAATGGTGCATGCACCGTGAATGTGCTCACAGAGACACGTGCACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp AACTTTTACAGCCACCCCTCTGGGAGTTGTACACACCTTTCAGTAGCCGAAGGGGGGAATTCTGACCCCTaGCCCCAGGAGGGAATACAA +
Preference number: 4 (lower is better)
Translates to: NFYSHPSGSCTHLSVAEGGNSDP*PQEGIQ
Trigger: TTGTATTCCCTCCTGGGGCCAGGGGTCAGAATTCCC...CCCTTCGGCTACTGAAAGGTGTGTACAACTCCCAGAGGGGTGGCTGTAAAAGTT
53% GC, longest homopolymer 6 nt, total homopolymer stretches 22 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp ACTAAAGCGGTTTTAGAGAAATTGCAGGCAGCAACCCCACCCACTCCCTTTACCTCAGCCCACTGCCTTTaGGGCCTGTCCAGAACCACT +
Preference number: 4 (lower is better)
Translates to: TKAVLEKLQAATPPTPFTSAHCL*GLSRTT
Trigger: AGTGGTTCTGGACAGGCCCCAAAGGCAGTGGGCTGA...GGTAAAGGGAGTGGGTGGGGTTGCTGCCTGCAATTTCTCTAAAACCGCTTTAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp ATGCGGGCAGTGTGGGTGCTGAGCTGCTGGAGGAGTAGCTCTCCACTCCCTGACCATCTGAGGTCAAAATaGAATCTGGCTGTTAACCTT +
Preference number: 4 (lower is better)
Translates to: MRAVWVLSCWRSSSPLPDHLRSK*NLAVNL
Trigger: AAGGTTAACAGCCAGATTCCATTTTGACCTCAGATG...GTCAGGGAGTGGAGAGCTACTCCTCCAGCAGCTCAGCACCCACACTGCCCGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp CACACACATGTGCGTCCCCCTTGCTCAGGATGTCTGGGTGTATGTACGAAGGCAAAATACACACACCTTTaGCGCTGGCCACAAACCCAC +
Preference number: 4 (lower is better)
Translates to: HTHVRPPCSGCLGVCTKAKYTHL*RWPQTH
Trigger: GTGGGTTTGTGGCCAGCGCCAAAGGTGTGTGTATTT...TGCCTTCGTACATACACCCAGACATCCTGAGCAAGGGGGACGCACATGTGTGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp AACTGCAGGCCCCCTGGAATTTACCTGGCCATCAGACCTGCCAGCAACAGTGGCGCACACGGCAGAAGCTaGAAAATGCCTTGTTTACAT +
Preference number: 4 (lower is better)
Translates to: NCRPPGIYLAIRPASNSGAHGRS*KMPCLH
Trigger: ATGTAAACAAGGCATTTTCCAGCTTCTGCCGTGTGC...GCCACTGTTGCTGGCAGGTCTGATGGCCAGGTAAATTCCAGGGGGCCTGCAGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp AACTGCAGGCCCCCTGGAATTTACCTGGCCATCAGACCTGCCAGCAACAGTGGCGATTGCTGGAAGAGATaGCAGCTATTTAAGACAGGG +
Preference number: 4 (lower is better)
Translates to: NCRPPGIYLAIRPASNSGDCWKR*QLFKTG
Trigger: CCCTGTCTTAAATAGCTGCCATCTCTTCCAGCAATC...GCCACTGTTGCTGGCAGGTCTGATGGCCAGGTAAATTCCAGGGGGCCTGCAGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp ACTAAAGCGGTTTTAGAGAAATTGCAGGCAGCAACCCCACCCACTCCCTTTACCTGCAAAGGGTGGTGGTaGGGGGAGTGTCCCAGGAAA +
Preference number: 4 (lower is better)
Translates to: TKAVLEKLQAATPPTPFTCKGWW*GECPRK
Trigger: TTTCCTGGGACACTCCCCCCACCACCACCCTTTGCA...GGTAAAGGGAGTGGGTGGGGTTGCTGCCTGCAATTTCTCTAAAACCGCTTTAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp CAAAGGGTAAAAGCGTGCTGCCCGCTCTGCACACGGCAGAAGCTGGAAAATGCCATACACTTTGGTCACTaGTGTGTGCAAAGGGTGGTG +
Preference number: 4 (lower is better)
Translates to: QRVKACCPLCTRQKLENAIHFGH*CVQRVV
Trigger: CACCACCCTTTGCACACACCAGTGACCAAAGTGTAT...GGCATTTTCCAGCTTCTGCCGTGTGCAGAGCGGGCAGCACGCTTTTACCCTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp AACTGCAGGCCCCCTGGAATTTACCTGGCCATCAGACCTGCCAGCAACAGTGGCAGCCCCCTAGGATTATaGAACCCAAAGCAGCATTTA +
Preference number: 4 (lower is better)
Translates to: NCRPPGIYLAIRPASNSGSPLGL*NPKQHL
Trigger: TAAATGCTGCTTTGGGTTCCATAATCCTAGGGGGCT...GCCACTGTTGCTGGCAGGTCTGATGGCCAGGTAAATTCCAGGGGGCCTGCAGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp ACTTTCAGGTCAGCACGAGTGAAGCGTGGTTTCCTGAGCTTGAAGGGCTCTGAATTCTTGGACCAGTGCTaGCCAGGCAGATGGGTTGCT +
Preference number: 4 (lower is better)
Translates to: TFRSARVKRGFLSLKGSEFLDQC*PGRWVA
Trigger: AGCAACCCATCTGCCTGGCCAGCACTGGTCCAAGAA...TTCAGAGCCCTTCAAGCTCAGGAAACCACGCTTCACTCGTGCTGACCTGAAAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp CACACACATGTGCGTCCCCCTTGCTCAGGATGTCTGGGTGTATGTACGAAGGCATTGTCATTAGAGTCCTaGGGGCCAAAGTTCCAGGAC +
Preference number: 4 (lower is better)
Translates to: HTHVRPPCSGCLGVCTKALSLES*GPKFQD
Trigger: GTCCTGGAACTTTGGCCCCCAGGACTCTAATGACAA...TGCCTTCGTACATACACCCAGACATCCTGAGCAAGGGGGACGCACATGTGTGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp AACTGCAGGCCCCCTGGAATTTACCTGGCCATCAGACCTGCCAGCAACAGTGGCTCCAGTGCTAGAATTTaGTTGGTTTGGACCACTCCA +
Preference number: 4 (lower is better)
Translates to: NCRPPGIYLAIRPASNSGSSARI*LVWTTP
Trigger: TGGAGTGGTCCAAACCAACCAAATTCTAGCACTGGA...GCCACTGTTGCTGGCAGGTCTGATGGCCAGGTAAATTCCAGGGGGCCTGCAGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp TGGAATTCTGACGACTGGCCTCTGATATATACAGGACAATCCAAGCTTTGGTGGAGGTGTTGCAGGCTGTaGCCCGCTGCTCCAGCTGGA +
Preference number: 4 (lower is better)
Translates to: WNSDDWPLIYTGQSKLWWRCCRL*PAAPAG
Trigger: TCCAGCTGGAGCAGCGGGCCACAGCCTGCAACACCT...CCACCAAAGCTTGGATTGTCCTGTATATATCAGAGGCCAGTCGTCAGAATTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR CCA 90 bp CAGCTGCCAGAATACTCACGGGTGCATCTTCATGCATGTTTGTCTACGTGGGTGGGTGCTGGGCCCCCTTaGGAATTCTTATCCCACAGA +
Preference number: 4 (lower is better)
Translates to: QLPEYSRVHLHACLSTWVGAGPP*EFLSHR
Trigger: TCTGTGGGATAAGAATTCCCAAGGGGGCCCAGCACC...CACCCACGTAGACAAACATGCATGAAGATGCACCCGTGAGTATTCTGGCAGCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR CCA 90 bp CTCTCCACACTCGAGACTTGCAGATGCACGTGTGACGGTGCCATTCTTCGTATATGGTTCTCGAGGTGCTaGGCCCCCTTGGGAATTCTT +
Preference number: 4 (lower is better)
Translates to: LSTLETCRCTCDGAILRIWFSRC*APLGIL
Trigger: AAGAATTCCCAAGGGGGCCCAGCACCTCGAGAACCA...TATACGAAGAATGGCACCGTCACACGTGCATCTGCAAGTCTCGAGTGTGGAGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR CCA 90 bp AATGAAGCTGAAGGAATCGAGTGGGAGGGACTGTTCTCCTCTTTGGGGGAGCTCTACTGGTCATTGGGGTaGGCAGGTTTGGTTCTCGAG +
Preference number: 4 (lower is better)
Translates to: NEAEGIEWEGLFSSLGELYWSLG*AGLVLE
Trigger: CTCGAGAACCAAACCTGCCCACCCCAATGACCAGTA...GAGCTCCCCCAAAGAGGAGAACAGTCCCTCCCACTCGATTCCTTCAGCTTCATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
3UTR CAA 72 bp TGCACGGCTAGGATCAAGAATCCTGAACCACATTGGTaGACAGGAACTGCAGGCCCCCTGGAATTTACCTGG +
Preference number: 4 (lower is better)
Translates to: CTARIKNPEPHW*TGTAGPLEFTW
Trigger: CCAGGTAAATTCCAGGGGGCCTGCAGTTCCTGTCAACCAATGTGGTTCAGGATTCTTGATCCTAGCCGTGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR CAA 72 bp CGACTGGCCTCTGATATATACAGGACAATCCAAGCTTaGGTGGAAAAGACCCGGCACCTCCACACTCTCCAC +
Preference number: 4 (lower is better)
Translates to: RLASDIYRTIQA*VEKTRHLHTLH
Trigger: GTGGAGAGTGTGGAGGTGCCGGGTCTTTTCCACCAAAGCTTGGATTGTCCTGTATATATCAGAGGCCAGTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR TCA 90 bp GGGTTTATCTTAAAGATGGGGGCGAAGGGGGTGTCTGCAAAGAAGCAATTCAAAGAGGAAGCACTGCCCTaGGAGCCAGTGGTGTTCCAG +
Preference number: 4 (lower is better)
Translates to: GFILKMGAKGVSAKKQFKEEALP*EPVVFQ
Trigger: CTGGAACACCACTGGCTCTCAGGGCAGTGCTTCCTC...TTTGAATTGCTTCTTTGCAGACACCCCCTTCGCCCCCATCTTTAAGATAAACCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp ACTAAAGCGGTTTTAGAGAAATTGCAGGCAGCAACCCCACCCACTCCCTTTACCTTGTCCCCAGCTTGCTaGGTTGTGGGAGGAAGCACT +
Preference number: 4 (lower is better)
Translates to: TKAVLEKLQAATPPTPFTLSPAC*VVGGST
Trigger: AGTGCTTCCTCCCACAACTCAGCAAGCTGGGGACAA...GGTAAAGGGAGTGGGTGGGGTTGCTGCCTGCAATTTCTCTAAAACCGCTTTAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp AACTGCAGGCCCCCTGGAATTTACCTGGCCATCAGACCTGCCAGCAACAGTGGCATCTGGGGACCATGTTaGTTTGTAATCAGGGAACTT +
Preference number: 4 (lower is better)
Translates to: NCRPPGIYLAIRPASNSGIWGPC*FVIREL
Trigger: AAGTTCCCTGATTACAAATCAACATGGTCCCCAGAT...GCCACTGTTGCTGGCAGGTCTGATGGCCAGGTAAATTCCAGGGGGCCTGCAGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp CACACACATGTGCGTCCCCCTTGCTCAGGATGTCTGGGTGTATGTACGAAGGCAATCTTGTTGGAGAGATaGGTGGGGTTGTGTCCTATG +
Preference number: 4 (lower is better)
Translates to: HTHVRPPCSGCLGVCTKAILLER*VGLCPM
Trigger: CATAGGACACAACCCCACTCATCTCTCCAACAAGAT...TGCCTTCGTACATACACCCAGACATCCTGAGCAAGGGGGACGCACATGTGTGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp GGATTTTTGCTGTACCTTCCTGTTACCTGTTTGTGTGCAAAGTTGGAAAGCTGCGCAGGTGTAGGGGGCTaGGCTTGTGCCAGAAAGCGG +
Preference number: 4 (lower is better)
Translates to: GFLLYLPVTCLCAKLESCAGVGG*ACARKR
Trigger: CCGCTTTCTGGCACAAGCTCAGCCCCCTACACCTGC...GCAGCTTTCCAACTTTGCACACAAACAGGTAACAGGAAGGTACAGCAAAAATCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp CAAAGGGTAAAAGCGTGCTGCCCGCTCTGCACACGGCAGAAGCTGGAAAATGCCCCCCAACAATTCTTTTaGATTTCCCTCCCTCCCAAA +
Preference number: 4 (lower is better)
Translates to: QRVKACCPLCTRQKLENAPQQFF*ISLPPK
Trigger: TTTGGGAGGGAGGGAAATTCAAAAGAATTGTTGGGG...GGCATTTTCCAGCTTCTGCCGTGTGCAGAGCGGGCAGCACGCTTTTACCCTTTG
52% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp GTATGCCACAATCACTCGGGATCTGGTCCCGGTGGCCACACGCATGCGGGCAGTTTTCAAAAGAATCCATaGTCGAGCTCTTACAAAGCT +
Preference number: 4 (lower is better)
Translates to: VCHNHSGSGPGGHTHAGSFQKNP*SSSYKA
Trigger: AGCTTTGTAAGAGCTCGATCATGGATTCTTTTGAAA...ACTGCCCGCATGCGTGTGGCCACCGGGACCAGATCCCGAGTGATTGTGGCATAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp GTATGCCACAATCACTCGGGATCTGGTCCCGGTGGCCACACGCATGCGGGCAGTAATTTCCTTTATGGGTaGGTATCTTACATCTGTGGA +
Preference number: 4 (lower is better)
Translates to: VCHNHSGSGPGGHTHAGSNFLYG*VSYICG
Trigger: TCCACAGATGTAAGATACTCACCCATAAAGGAAATT...ACTGCCCGCATGCGTGTGGCCACCGGGACCAGATCCCGAGTGATTGTGGCATAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp CAAAGGGTAAAAGCGTGCTGCCCGCTCTGCACACGGCAGAAGCTGGAAAATGCCCTATGTAATGAGAGGTaGCCAGCAAGCCTGTATCTA +
Preference number: 4 (lower is better)
Translates to: QRVKACCPLCTRQKLENALCNER*PASLYL
Trigger: TAGATACAGGCTTGCTGGTCACCTCTCATTACATAG...GGCATTTTCCAGCTTCTGCCGTGTGCAGAGCGGGCAGCACGCTTTTACCCTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp CCCCTGTCTCCTCTCCCAAGTCCCAGAATCTCTTCCACTCAACTCTACACTGTGGTCCTCTGTCTGGTGTaGGACACCCCTTTCTCTATT +
Preference number: 4 (lower is better)
Translates to: PLSPLPSPRISSTQLYTVVLCLV*DTPFSI
Trigger: AATAGAGAAAGGGGTGTCTCACACCAGACAGAGGAC...CACAGTGTAGAGTTGAGTGGAAGAGATTCTGGGACTTGGGAGAGGAGACAGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp ATGCGGGCAGTGTGGGTGCTGAGCTGCTGGAGGAGTAGCTCTCCACTCCCTGACATGAGGTCTGAAGACTaGCAATTCATTGTATACACA +
Preference number: 4 (lower is better)
Translates to: MRAVWVLSCWRSSSPLPDMRSED*QFIVYT
Trigger: TGTGTATACAATGAATTGTCAGTCTTCAGACCTCAT...GTCAGGGAGTGGAGAGCTACTCCTCCAGCAGCTCAGCACCCACACTGCCCGCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp AACTGCAGGCCCCCTGGAATTTACCTGGCCATCAGACCTGCCAGCAACAGTGGCTATCTGTGTGTTTCTTaGCTGTATGGACTCCCTGTA +
Preference number: 4 (lower is better)
Translates to: NCRPPGIYLAIRPASNSGYLCVS*LYGLPV
Trigger: TACAGGGAGTCCATACAGTCAAGAAACACACAGATA...GCCACTGTTGCTGGCAGGTCTGATGGCCAGGTAAATTCCAGGGGGCCTGCAGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp GGATTTTTGCTGTACCTTCCTGTTACCTGTTTGTGTGCAAAGTTGGAAAGCTGCGGGCAGTGTGGGTGCTaGGCTGCTGGAGGAGTAGCT +
Preference number: 4 (lower is better)
Translates to: GFLLYLPVTCLCAKLESCGQCGC*AAGGVA
Trigger: AGCTACTCCTCCAGCAGCTCAGCACCCACACTGCCC...GCAGCTTTCCAACTTTGCACACAAACAGGTAACAGGAAGGTACAGCAAAAATCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp AACTGCAGGCCCCCTGGAATTTACCTGGCCATCAGACCTGCCAGCAACAGTGGCACCATCCCAACTTGTTaGTATTGGCTAGATATGGGT +
Preference number: 4 (lower is better)
Translates to: NCRPPGIYLAIRPASNSGTIPTC*YWLDMG
Trigger: ACCCATATCTAGCCAATATCAACAAGTTGGGATGGT...GCCACTGTTGCTGGCAGGTCTGATGGCCAGGTAAATTCCAGGGGGCCTGCAGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp AACTTTTACAGCCACCCCTCTGGGAGTTGTACACACCTTTCAGTAGCCGAAGGGTCTTTGGGGGAGCTCTaGGGAATCATGGAAATGGCC +
Preference number: 4 (lower is better)
Translates to: NFYSHPSGSCTHLSVAEGSLGEL*GIMEMA
Trigger: GGCCATTTCCATGATTCCTCAGAGCTCCCCCAAAGA...CCCTTCGGCTACTGAAAGGTGTGTACAACTCCCAGAGGGGTGGCTGTAAAAGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp CCCCTGTCTCCTCTCCCAAGTCCCAGAATCTCTTCCACTCAACTCTACACTGTGGCAATGCAGGCGCTATaGTTCATCACAGGCAAGATC +
Preference number: 4 (lower is better)
Translates to: PLSPLPSPRISSTQLYTVAMQAL*FITGKI
Trigger: GATCTTGCCTGTGATGAATCATAGCGCCTGCATTGC...CACAGTGTAGAGTTGAGTGGAAGAGATTCTGGGACTTGGGAGAGGAGACAGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp AACTGCAGGCCCCCTGGAATTTACCTGGCCATCAGACCTGCCAGCAACAGTGGCACTATACAAGATCAGTaGGATCCAACTGAAAAGGGC +
Preference number: 4 (lower is better)
Translates to: NCRPPGIYLAIRPASNSGTIQDQ*DPTEKG
Trigger: GCCCTTTTCAGTTGGATCTCACTGATCTTGTATAGT...GCCACTGTTGCTGGCAGGTCTGATGGCCAGGTAAATTCCAGGGGGCCTGCAGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp TGTGCACGTGTCTCTGTGAGCACATTCACGGTGCATGCACCATTTTTGATGTCTAGGGGGTGGCCCTTTTaGTTGTCCCATGCTCCAGTG +
Preference number: 4 (lower is better)
Translates to: CARVSVSTFTVHAPFLMSRGWPF*LSHAPV
Trigger: CACTGGAGCATGGGACAATCAAAAGGGCCACCCCCT...AGACATCAAAAATGGTGCATGCACCGTGAATGTGCTCACAGAGACACGTGCACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp TCTGACGACTGGCCTCTGATATATACAGGACAATCCAAGCTTTGGTGGAAAAGAGCCCCAGCCAGTGTTTaGGAGCACCCTGGGGTCCAA +
Preference number: 4 (lower is better)
Translates to: SDDWPLIYTGQSKLWWKRAPASV*EHPGVQ
Trigger: TTGGACCCCAGGGTGCTCTCAAACACTGGCTGGGGC...TCTTTTCCACCAAAGCTTGGATTGTCCTGTATATATCAGAGGCCAGTCGTCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR GCA 90 bp AACTTTTACAGCCACCCCTCTGGGAGTTGTACACACCTTTCAGTAGCCGAAGGGCGCTCCTGTCACTTGTaGGTTGTTTGGGTTTGCTCC +
Preference number: 4 (lower is better)
Translates to: NFYSHPSGSCTHLSVAEGRSCHL*VVWVCS
Trigger: GGAGCAAACCCAAACAACGCACAAGTGACAGGAGCG...CCCTTCGGCTACTGAAAGGTGTGTACAACTCCCAGAGGGGTGGCTGTAAAAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp AACTTTTACAGCCACCCCTCTGGGAGTTGTACACACCTTTCAGTAGCCGAAGGGCCAGCCTGTGGTCGATaGTCCTGTATCATCCATCTC +
Preference number: 4 (lower is better)
Translates to: NFYSHPSGSCTHLSVAEGPACGR*SCIIHL
Trigger: GAGATGGATGATACAGGAGCATCGACCACAGGCTGG...CCCTTCGGCTACTGAAAGGTGTGTACAACTCCCAGAGGGGTGGCTGTAAAAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301923.13
ENST00000454349.7
CDS-3UTR GCA 90 bp GTATGCCACAATCACTCGGGATCTGGTCCCGGTGGCCACACGCATGCGGGCAGTCAGACAAATCCATTTTaGTGCTTGGATTATCTTCAG +
Preference number: 4 (lower is better)
Translates to: VCHNHSGSGPGGHTHAGSQTNPF*CLDYLQ
Trigger: CTGAAGATAATCCAAGCAGCAAAATGGATTTGTCTG...ACTGCCCGCATGCGTGTGGCCACCGGGACCAGATCCCGAGTGATTGTGGCATAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp TCTGAACCAAGAAAGGTTGAGAGCTCCAGGTATTGTGTGGAGAACATTCTGGAGAACTGGGGAGGCACTTaGGCCCGGAGACTGGGAGAA +
Preference number: 4 (lower is better)
Translates to: SEPRKVESSRYCVENILENWGGT*ARRLGE
Trigger: TTCTCCCAGTCTCCGGGCGCAAGTGCCTCCCCAGTT...CTCCAGAATGTTCTCCACACAATACCTGGAGCTCTCAACCTTTCTTGGTTCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp TCTGGTGCATCTTTAATTCAGCAGCTGCCAGAATACTCACGGGTGCATCTTCATAACTGGGGAGGCACTTaGGCCCGGAGACTGGGAGAA +
Preference number: 4 (lower is better)
Translates to: SGASLIQQLPEYSRVHLHNWGGT*ARRLGE
Trigger: TTCTCCCAGTCTCCGGGCGCAAGTGCCTCCCCAGTT...ATGAAGATGCACCCGTGAGTATTCTGGCAGCTGCTGAATTAAAGATGCACCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR GCA 90 bp CTTTGGTGGAAAAGACCCGGCACCTCCACACTCTCCACACTCGAGACTTGCAGATTCTGTAACAACTGCTaGTGTTGCTGCTGCTGCAAG +
Preference number: 4 (lower is better)
Translates to: LWWKRPGTSTLSTLETCRFCNNC*CCCCCK
Trigger: CTTGCAGCAGCAGCAACAGCAGCAGTTGTTACAGAA...TCTGCAAGTCTCGAGTGTGGAGAGTGTGGAGGTGCCGGGTCTTTTCCACCAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR GCA 90 bp ACTAAAGCGGTTTTAGAGAAATTGCAGGCAGCAACCCCACCCACTCCCTTTACCTGCTGCTGCTGCTGCTaGTGCAGTGCACTCACCATT +
Preference number: 4 (lower is better)
Translates to: TKAVLEKLQAATPPTPFTCCCCC*CSALTI
Trigger: AATGGTGAGTGCACTGCAGCAGCAGCAGCAGCAGCA...GGTAAAGGGAGTGGGTGGGGTTGCTGCCTGCAATTTCTCTAAAACCGCTTTAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp GGATTTTTGCTGTACCTTCCTGTTACCTGTTTGTGTGCAAAGTTGGAAAGCTGCATGCCTGGCTGCCTCTaGTGCTGCTGCTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: GFLLYLPVTCLCAKLESCMPGCL*CCCCCC
Trigger: GCAGCAGCAGCAGCAGCAGCAGAGGCAGCCAGGCAT...GCAGCTTTCCAACTTTGCACACAAACAGGTAACAGGAAGGTACAGCAAAAATCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp TCTGGTGCATCTTTAATTCAGCAGCTGCCAGAATACTCACGGGTGCATCTTCATAGGGCGAGTGCTTCATaGCTGGCTGCCTCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: SGASLIQQLPEYSRVHLHRASAS*LAASAA
Trigger: AGCAGCAGAGGCAGCCAGGCATGAAGCACTCGCCCT...ATGAAGATGCACCCGTGAGTATTCTGGCAGCTGCTGAATTAAAGATGCACCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR GCA 90 bp CAAAGGGTAAAAGCGTGCTGCCCGCTCTGCACACGGCAGAAGCTGGAAAATGCCGAGGCCAACTGGCATTaGTGGATTTACTTCCGATTT +
Preference number: 4 (lower is better)
Translates to: QRVKACCPLCTRQKLENAEANWH*WIYFRF
Trigger: AAATCGGAAGTAAATCCAGCAATGCCAGTTGGCCTC...GGCATTTTCCAGCTTCTGCCGTGTGCAGAGCGGGCAGCACGCTTTTACCCTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp TGTGCACGTGTCTCTGTGAGCACATTCACGGTGCATGCACCATTTTTGATGTCTCTGATCGGGGTGCTGTaGTGCTCCAGGGAGATGATG +
Preference number: 4 (lower is better)
Translates to: CARVSVSTFTVHAPFLMSLIGVL*CSREMM
Trigger: CATCATCTCCCTGGAGCAGCACAGCACCCCGATCAG...AGACATCAAAAATGGTGCATGCACCGTGAATGTGCTCACAGAGACACGTGCACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp AACTTTTACAGCCACCCCTCTGGGAGTTGTACACACCTTTCAGTAGCCGAAGGGGTGGGCCATGCTGCATaGAGATCGTTCTCAAGGTTG +
Preference number: 4 (lower is better)
Translates to: NFYSHPSGSCTHLSVAEGVGHAA*RSFSRL
Trigger: CAACCTTGAGAACGATCTGCATGCAGCATGGCCCAC...CCCTTCGGCTACTGAAAGGTGTGTACAACTCCCAGAGGGGTGGCTGTAAAAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp GGATTTTTGCTGTACCTTCCTGTTACCTGTTTGTGTGCAAAGTTGGAAAGCTGCTGGCGCACTTGGGGTTaGTGCAGGTGTAGGGGGCTG +
Preference number: 4 (lower is better)
Translates to: GFLLYLPVTCLCAKLESCWRTWG*CRCRGL
Trigger: CAGCCCCCTACACCTGCAGCAACCCCAAGTGCGCCA...GCAGCTTTCCAACTTTGCACACAAACAGGTAACAGGAAGGTACAGCAAAAATCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp ACTTTCAGGTCAGCACGAGTGAAGCGTGGTTTCCTGAGCTTGAAGGGCTCTGAAGTAAAGGAGCAGGGCTaGCCATCCTATGGGGATCTT +
Preference number: 4 (lower is better)
Translates to: TFRSARVKRGFLSLKGSEVKEQG*PSYGDL
Trigger: AAGATCCCCATAGGATGGGCAGCCCTGCTCCTTTAC...TTCAGAGCCCTTCAAGCTCAGGAAACCACGCTTCACTCGTGCTGACCTGAAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp CACACACATGTGCGTCCCCCTTGCTCAGGATGTCTGGGTGTATGTACGAAGGCAAGGGAGGCAACTATGTaGTCAGACAGTCTGTCAATG +
Preference number: 4 (lower is better)
Translates to: HTHVRPPCSGCLGVCTKAREATM*SDSLSM
Trigger: CATTGACAGACTGTCTGAGCACATAGTTGCCTCCCT...TGCCTTCGTACATACACCCAGACATCCTGAGCAAGGGGGACGCACATGTGTGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp AATGAAGCTGAAGGAATCGAGTGGGAGGGACTGTTCTCCTCTTTGGGGGAGCTCGCAGACTGTCAGCGATaGAGCTTTCTGAGAAGTCAG +
Preference number: 4 (lower is better)
Translates to: NEAEGIEWEGLFSSLGELADCQR*SFLRSQ
Trigger: CTGACTTCTCAGAAAGCTGCATCGCTGACAGTCTGC...GAGCTCCCCCAAAGAGGAGAACAGTCCCTCCCACTCGATTCCTTCAGCTTCATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp CAAAGGGTAAAAGCGTGCTGCCCGCTCTGCACACGGCAGAAGCTGGAAAATGCCACAGATACTCAGATGTaGCTGGTGGCCATTCACTTA +
Preference number: 4 (lower is better)
Translates to: QRVKACCPLCTRQKLENATDTQM*LVAIHL
Trigger: TAAGTGAATGGCCACCAGGCACATCTGAGTATCTGT...GGCATTTTCCAGCTTCTGCCGTGTGCAGAGCGGGCAGCACGCTTTTACCCTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp GTATGCCACAATCACTCGGGATCTGGTCCCGGTGGCCACACGCATGCGGGCAGTACTAACGAAAAGGCCTaGATGAAACTTAACAGATAC +
Preference number: 4 (lower is better)
Translates to: VCHNHSGSGPGGHTHAGSTNEKA*MKLNRY
Trigger: GTATCTGTTAAGTTTCATGCAGGCCTTTTCGTTAGT...ACTGCCCGCATGCGTGTGGCCACCGGGACCAGATCCCGAGTGATTGTGGCATAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp AACTGCAGGCCCCCTGGAATTTACCTGGCCATCAGACCTGCCAGCAACAGTGGCATGCTTTCAGGAGGCTaGTCACCACTTATTCTTTTC +
Preference number: 4 (lower is better)
Translates to: NCRPPGIYLAIRPASNSGMLSGG*SPLILF
Trigger: GAAAAGAATAAGTGGTGAGCAGCCTCCTGAAAGCAT...GCCACTGTTGCTGGCAGGTCTGATGGCCAGGTAAATTCCAGGGGGCCTGCAGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp AATGAAGCTGAAGGAATCGAGTGGGAGGGACTGTTCTCCTCTTTGGGGGAGCTCCCCACAGAGGGCTCATaGAGGCTTGTATATGTGAAC +
Preference number: 4 (lower is better)
Translates to: NEAEGIEWEGLFSSLGELPTEGS*RLVYVN
Trigger: GTTCACATATACAAGCCTGCATGAGCCCTCTGTGGG...GAGCTCCCCCAAAGAGGAGAACAGTCCCTCCCACTCGATTCCTTCAGCTTCATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp GGATTTTTGCTGTACCTTCCTGTTACCTGTTTGTGTGCAAAGTTGGAAAGCTGCAGCAGGAAGAGGGCATaGTCAAGGCACCCAGCGGGG +
Preference number: 4 (lower is better)
Translates to: GFLLYLPVTCLCAKLESCSRKRA*SRHPAG
Trigger: CCCCGCTGGGTGCCTTGAGCATGCCCTCTTCCTGCT...GCAGCTTTCCAACTTTGCACACAAACAGGTAACAGGAAGGTACAGCAAAAATCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp TGTGCACGTGTCTCTGTGAGCACATTCACGGTGCATGCACCATTTTTGATGTCTAGGAGCCTTGGGATATaGTCCTGGCCCAGGGACACT +
Preference number: 4 (lower is better)
Translates to: CARVSVSTFTVHAPFLMSRSLGI*SWPRDT
Trigger: AGTGTCCCTGGGCCAGGAGCATATCCCAAGGCTCCT...AGACATCAAAAATGGTGCATGCACCGTGAATGTGCTCACAGAGACACGTGCACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp CACACACATGTGCGTCCCCCTTGCTCAGGATGTCTGGGTGTATGTACGAAGGCAAAGAAGCTGTGGTCATaGTTGGGAATTCTGACCCCT +
Preference number: 4 (lower is better)
Translates to: HTHVRPPCSGCLGVCTKAKKLWS*LGILTP
Trigger: AGGGGTCAGAATTCCCAAGCATGACCACAGCTTCTT...TGCCTTCGTACATACACCCAGACATCCTGAGCAAGGGGGACGCACATGTGTGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp CACACACATGTGCGTCCCCCTTGCTCAGGATGTCTGGGTGTATGTACGAAGGCAGCAAGCCTGTATCTATaGCAGAGTGTGGTAGAAGAG +
Preference number: 4 (lower is better)
Translates to: HTHVRPPCSGCLGVCTKAASLYL*QSVVEE
Trigger: CTCTTCTACCACACTCTGGCATAGATACAGGCTTGC...TGCCTTCGTACATACACCCAGACATCCTGAGCAAGGGGGACGCACATGTGTGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp GGGTTTATCTTAAAGATGGGGGCGAAGGGGGTGTCTGCAAAGAAGCAATTCAAAGGACTAACGTGGGTCTaGGTCGCCTGGGTACCTTCC +
Preference number: 4 (lower is better)
Translates to: GFILKMGAKGVSAKKQFKGLTWV*VAWVPS
Trigger: GGAAGGTACCCAGGCGACGCAGACCCACGTTAGTCC...TTTGAATTGCTTCTTTGCAGACACCCCCTTCGCCCCCATCTTTAAGATAAACCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp AATGAAGCTGAAGGAATCGAGTGGGAGGGACTGTTCTCCTCTTTGGGGGAGCTCACTGAAGAACAAGGATaGAACGCTACTCCCTTCCCC +
Preference number: 4 (lower is better)
Translates to: NEAEGIEWEGLFSSLGELTEEQG*NATPFP
Trigger: GGGGAAGGGAGTAGCGTTGCATCCTTGTTCTTCAGT...GAGCTCCCCCAAAGAGGAGAACAGTCCCTCCCACTCGATTCCTTCAGCTTCATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp TGTGCACGTGTCTCTGTGAGCACATTCACGGTGCATGCACCATTTTTGATGTCTCCTGGCCATCAGACCTaGCAGCAACAGTGGCAAGAG +
Preference number: 4 (lower is better)
Translates to: CARVSVSTFTVHAPFLMSPGHQT*QQQWQE
Trigger: CTCTTGCCACTGTTGCTGGCAGGTCTGATGGCCAGG...AGACATCAAAAATGGTGCATGCACCGTGAATGTGCTCACAGAGACACGTGCACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp AATGAAGCTGAAGGAATCGAGTGGGAGGGACTGTTCTCCTCTTTGGGGGAGCTCTTGGTTGACAGGAACTaGAGGCCCCCTGGAATTTAC +
Preference number: 4 (lower is better)
Translates to: NEAEGIEWEGLFSSLGELLVDRN*RPPGIY
Trigger: GTAAATTCCAGGGGGCCTGCAGTTCCTGTCAACCAA...GAGCTCCCCCAAAGAGGAGAACAGTCCCTCCCACTCGATTCCTTCAGCTTCATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp CACACACATGTGCGTCCCCCTTGCTCAGGATGTCTGGGTGTATGTACGAAGGCAGTGGAGTTCCATTGCTaGACTGGATTAACACTGCAC +
Preference number: 4 (lower is better)
Translates to: HTHVRPPCSGCLGVCTKAVEFHC*TGLTLH
Trigger: GTGCAGTGTTAATCCAGTGCAGCAATGGAACTCCAC...TGCCTTCGTACATACACCCAGACATCCTGAGCAAGGGGGACGCACATGTGTGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp AACTGCAGGCCCCCTGGAATTTACCTGGCCATCAGACCTGCCAGCAACAGTGGCCTATGGATTCTACAGTaGAAACCAAAATGCCAGGGA +
Preference number: 4 (lower is better)
Translates to: NCRPPGIYLAIRPASNSGLWILQ*KPKCQG
Trigger: TCCCTGGCATTTTGGTTTGCACTGTAGAATCCATAG...GCCACTGTTGCTGGCAGGTCTGATGGCCAGGTAAATTCCAGGGGGCCTGCAGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp CAAAGGGTAAAAGCGTGCTGCCCGCTCTGCACACGGCAGAAGCTGGAAAATGCCGGCGAAGGGGGTGTCTaGAAAGAAGCAATTCAAAAT +
Preference number: 4 (lower is better)
Translates to: QRVKACCPLCTRQKLENAGEGGV*KEAIQN
Trigger: ATTTTGAATTGCTTCTTTGCAGACACCCCCTTCGCC...GGCATTTTCCAGCTTCTGCCGTGTGCAGAGCGGGCAGCACGCTTTTACCCTTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp CCCCTGTCTCCTCTCCCAAGTCCCAGAATCTCTTCCACTCAACTCTACACTGTGAGCCTGCCATGCAAGTaGACCTCTAAAGTGCCTAGT +
Preference number: 4 (lower is better)
Translates to: PLSPLPSPRISSTQLYTVSLPCK*TSKVPS
Trigger: ACTAGGCACTTTAGAGGTGCACTTGCATGGCAGGCT...CACAGTGTAGAGTTGAGTGGAAGAGATTCTGGGACTTGGGAGAGGAGACAGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp TGTGCACGTGTCTCTGTGAGCACATTCACGGTGCATGCACCATTTTTGATGTCTGGGCCCAGCCTGCCATaGAAGTGCACCTCTAAAGTG +
Preference number: 4 (lower is better)
Translates to: CARVSVSTFTVHAPFLMSGPSLP*KCTSKV
Trigger: CACTTTAGAGGTGCACTTGCATGGCAGGCTGGGCCC...AGACATCAAAAATGGTGCATGCACCGTGAATGTGCTCACAGAGACACGTGCACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp ACTAAAGCGGTTTTAGAGAAATTGCAGGCAGCAACCCCACCCACTCCCTTTACCTCCTTCTTGGACCAGTaGTGGCCAGGCAGATGGGTT +
Preference number: 4 (lower is better)
Translates to: TKAVLEKLQAATPPTPFTSFLDQ*WPGRWV
Trigger: AACCCATCTGCCTGGCCAGCACTGGTCCAAGAAGGA...GGTAAAGGGAGTGGGTGGGGTTGCTGCCTGCAATTTCTCTAAAACCGCTTTAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp ATGCGGGCAGTGTGGGTGCTGAGCTGCTGGAGGAGTAGCTCTCCACTCCCTGACTACTGTGCTAACCTGTaGACTGGAATTACTATTATC +
Preference number: 4 (lower is better)
Translates to: MRAVWVLSCWRSSSPLPDYCANL*TGITII
Trigger: GATAATAGTAATTCCAGTGCACAGGTTAGCACAGTA...GTCAGGGAGTGGAGAGCTACTCCTCCAGCAGCTCAGCACCCACACTGCCCGCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp CCACACTCGAGACTTGCAGATGCACGTGTGACGGTGCCATTCTTCGTATATGTTAGAAGGCCCCCTAGCTaGACCCCAAGATCCAACACT +
Preference number: 4 (lower is better)
Translates to: PHSRLADARVTVPFFVYVRRPPS*TPRSNT
Trigger: AGTGTTGGATCTTGGGGTGCAGCTAGGGGGCCTTCT...AACATATACGAAGAATGGCACCGTCACACGTGCATCTGCAAGTCTCGAGTGTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR GCA 90 bp ACTAAAGCGGTTTTAGAGAAATTGCAGGCAGCAACCCCACCCACTCCCTTTACCAGAAGGCCCCCTAGCTaGACCCCAAGATCCAACACT +
Preference number: 4 (lower is better)
Translates to: TKAVLEKLQAATPPTPFTRRPPS*TPRSNT
Trigger: AGTGTTGGATCTTGGGGTGCAGCTAGGGGGCCTTCT...GGTAAAGGGAGTGGGTGGGGTTGCTGCCTGCAATTTCTCTAAAACCGCTTTAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp CCGGCACCTCCACACTCTCCACACTCGAGACTTGCAGATGCACGTGTGACGGTGCATTGTTTCCAGAATTaGTTTGTCCAGAGACTGTGT +
Preference number: 4 (lower is better)
Translates to: PAPPHSPHSRLADARVTVHCFQN*FVQRLC
Trigger: ACACAGTCTCTGGACAAAGCAATTCTGGAAACAATG...CACCGTCACACGTGCATCTGCAAGTCTCGAGTGTGGAGAGTGTGGAGGTGCCGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR GCA 90 bp CAAAGGGTAAAAGCGTGCTGCCCGCTCTGCACACGGCAGAAGCTGGAAAATGCCCAGACTTCATTTGATTaGTTTGGCTGGGTGCATCTC +
Preference number: 4 (lower is better)
Translates to: QRVKACCPLCTRQKLENAQTSFD*FGWVHL
Trigger: GAGATGCACCCAGCCAAAGCAATCAAATGAAGTCTG...GGCATTTTCCAGCTTCTGCCGTGTGCAGAGCGGGCAGCACGCTTTTACCCTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp GCAGCTGCCAGAATACTCACGGGTGCATCTTCATGCATGTTTGTCTACGTGGGTCCCACCCCTGATCCTTaGTGGGATTCTCATTCCAAG +
Preference number: 4 (lower is better)
Translates to: AAARILTGASSCMFVYVGPTPDP*WDSHSK
Trigger: CTTGGAATGAGAATCCCAGCAAGGATCAGGGGTGGG...ACCCACGTAGACAAACATGCATGAAGATGCACCCGTGAGTATTCTGGCAGCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR GCA 90 bp CCCCTGTCTCCTCTCCCAAGTCCCAGAATCTCTTCCACTCAACTCTACACTGTGATGCTGGGGATCTTTTaGAATCCTCCCACCCACCTT +
Preference number: 4 (lower is better)
Translates to: PLSPLPSPRISSTQLYTVMLGIF*NPPTHL
Trigger: AAGGTGGGTGGGAGGATTGCAAAAGATCCCCAGCAT...CACAGTGTAGAGTTGAGTGGAAGAGATTCTGGGACTTGGGAGAGGAGACAGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp CCCCTGTCTCCTCTCCCAAGTCCCAGAATCTCTTCCACTCAACTCTACACTGTGCAGGTGGTGTGCTTTTaGTCCAGACTGATGCCGATT +
Preference number: 4 (lower is better)
Translates to: PLSPLPSPRISSTQLYTVQVVCF*SRLMPI
Trigger: AATCGGCATCAGTCTGGAGCAAAAGCACACCACCTG...CACAGTGTAGAGTTGAGTGGAAGAGATTCTGGGACTTGGGAGAGGAGACAGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454349.7
CDS-3UTR CCA 90 bp CCCCTGTCTCCTCTCCCAAGTCCCAGAATCTCTTCCACTCAACTCTACACTGTGCACTTGTGCGTTGTTTaGGTTTGCTCCAGGTGCTGT +
Preference number: 4 (lower is better)
Translates to: PLSPLPSPRISSTQLYTVHLCVV*VCSRCC
Trigger: ACAGCACCTGGAGCAAACCCAAACAACGCACAAGTG...CACAGTGTAGAGTTGAGTGGAAGAGATTCTGGGACTTGGGAGAGGAGACAGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp CTTTGGTGGAAAAGACCCGGCACCTCCACACTCTCCACACTCGAGACTTGCAGAATTGAGGCAGAAACCTaGGGGGAAATAAACTGGGGA +
Preference number: 4 (lower is better)
Translates to: LWWKRPGTSTLSTLETCRIEAET*GEINWG
Trigger: TCCCCAGTTTATTTCCCCCCAGGTTTCTGCCTCAAT...TCTGCAAGTCTCGAGTGTGGAGAGTGTGGAGGTGCCGGGTCTTTTCCACCAAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR CCA 90 bp CAAAGGGTAAAAGCGTGCTGCCCGCTCTGCACACGGCAGAAGCTGGAAAATGCCCCACATTCAATGCGTTaGGTACCATGTTGTCCAGAT +
Preference number: 4 (lower is better)
Translates to: QRVKACCPLCTRQKLENAPHSMR*VPCCPD
Trigger: ATCTGGACAACATGGTACCCAACGCATTGAATGTGG...GGCATTTTCCAGCTTCTGCCGTGTGCAGAGCGGGCAGCACGCTTTTACCCTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp GGGTTTATCTTAAAGATGGGGGCGAAGGGGGTGTCTGCAAAGAAGCAATTCAAACCAGCAGGACCCGTATaGCCACCCAGTGTGTCACCA +
Preference number: 4 (lower is better)
Translates to: GFILKMGAKGVSAKKQFKPAGPV*PPSVSP
Trigger: TGGTGACACACTGGGTGGCCATACGGGTCCTGCTGG...TTTGAATTGCTTCTTTGCAGACACCCCCTTCGCCCCCATCTTTAAGATAAACCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp CAAAGGGTAAAAGCGTGCTGCCCGCTCTGCACACGGCAGAAGCTGGAAAATGCCTTGGATACCTTTCCATaGCACTCCTGGTTGGAATTC +
Preference number: 4 (lower is better)
Translates to: QRVKACCPLCTRQKLENALDTFP*HSWLEF
Trigger: GAATTCCAACCAGGAGTGCCATGGAAAGGTATCCAA...GGCATTTTCCAGCTTCTGCCGTGTGCAGAGCGGGCAGCACGCTTTTACCCTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp CCCCTGTCTCCTCTCCCAAGTCCCAGAATCTCTTCCACTCAACTCTACACTGTGGGTCAGTATCTACAATaGGAGATGTGGCTGTACCCC +
Preference number: 4 (lower is better)
Translates to: PLSPLPSPRISSTQLYTVGQYLQ*EMWLYP
Trigger: GGGGTACAGCCACATCTCCCATTGTAGATACTGACC...CACAGTGTAGAGTTGAGTGGAAGAGATTCTGGGACTTGGGAGAGGAGACAGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp ACTTTCAGGTCAGCACGAGTGAAGCGTGGTTTCCTGAGCTTGAAGGGCTCTGAATGGGGTTGTGTCCTATaGGATCTGGGGACCATGTTG +
Preference number: 4 (lower is better)
Translates to: TFRSARVKRGFLSLKGSEWGCVL*DLGTML
Trigger: CAACATGGTCCCCAGATCCCATAGGACACAACCCCA...TTCAGAGCCCTTCAAGCTCAGGAAACCACGCTTCACTCGTGCTGACCTGAAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp CAGCTGCCAGAATACTCACGGGTGCATCTTCATGCATGTTTGTCTACGTGGGTGTGGGGTTGTGTCCTATaGGATCTGGGGACCATGTTG +
Preference number: 4 (lower is better)
Translates to: QLPEYSRVHLHACLSTWVWGCVL*DLGTML
Trigger: CAACATGGTCCCCAGATCCCATAGGACACAACCCCA...CACCCACGTAGACAAACATGCATGAAGATGCACCCGTGAGTATTCTGGCAGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR CCA 90 bp TCCCTAATGACTAAAGCTGACCGTCTGTTTGTTTGTATCCAACGGATAGCTTCTGGTCAGACCAGGAGGTaGGCGGGGCAGCGGTGTAGT +
Preference number: 4 (lower is better)
Translates to: SLMTKADRLFVCIQRIASGQTRR*AGQRCS
Trigger: ACTACACCGCTGCCCCGCCCACCTCCTGGTCTGACC...AGAAGCTATCCGTTGGATACAAACAAACAGACGGTCAGCTTTAGTCATTAGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp GGATTTTTGCTGTACCTTCCTGTTACCTGTTTGTGTGCAAAGTTGGAAAGCTGCCGCAGCTGGCGCACTTaGGGTTGCTGCAGGTGTAGG +
Preference number: 4 (lower is better)
Translates to: GFLLYLPVTCLCAKLESCRSWRT*GCCRCR
Trigger: CCTACACCTGCAGCAACCCCAAGTGCGCCAGCTGCG...GCAGCTTTCCAACTTTGCACACAAACAGGTAACAGGAAGGTACAGCAAAAATCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp AACTTTTACAGCCACCCCTCTGGGAGTTGTACACACCTTTCAGTAGCCGAAGGGACTGCCCGAGCCCAGTaGACCCACCAAAAAGATTCA +
Preference number: 4 (lower is better)
Translates to: NFYSHPSGSCTHLSVAEGTARAQ*THQKDS
Trigger: TGAATCTTTTTGGTGGGTCCACTGGGCTCGGGCAGT...CCCTTCGGCTACTGAAAGGTGTGTACAACTCCCAGAGGGGTGGCTGTAAAAGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp AACTTTTACAGCCACCCCTCTGGGAGTTGTACACACCTTTCAGTAGCCGAAGGGCAGAACGAGCATGCCTaGGCAGTTACATGTGCCAGA +
Preference number: 4 (lower is better)
Translates to: NFYSHPSGSCTHLSVAEGQNEHA*AVTCAR
Trigger: TCTGGCACATGTAACTGCCCAGGCATGCTCGTTCTG...CCCTTCGGCTACTGAAAGGTGTGTACAACTCCCAGAGGGGTGGCTGTAAAAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp GGGTTTATCTTAAAGATGGGGGCGAAGGGGGTGTCTGCAAAGAAGCAATTCAAAAACCAAGAGCGGCAGTaGACAGGGTCGCCACTGGCT +
Preference number: 4 (lower is better)
Translates to: GFILKMGAKGVSAKKQFKNQERQ*TGSPLA
Trigger: AGCCAGTGGCGACCCTGTCCACTGCCGCTCTTGGTT...TTTGAATTGCTTCTTTGCAGACACCCCCTTCGCCCCCATCTTTAAGATAAACCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp ACTTTCAGGTCAGCACGAGTGAAGCGTGGTTTCCTGAGCTTGAAGGGCTCTGAAAAACACGTCCAGGGTTaGGGACTGAGGGATCAGAGA +
Preference number: 4 (lower is better)
Translates to: TFRSARVKRGFLSLKGSEKHVQG*GLRDQR
Trigger: TCTCTGATCCCTCAGTCCCCAACCCTGGACGTGTTT...TTCAGAGCCCTTCAAGCTCAGGAAACCACGCTTCACTCGTGCTGACCTGAAAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp CCCCTGTCTCCTCTCCCAAGTCCCAGAATCTCTTCCACTCAACTCTACACTGTGAAATACACACACCTTTaGCGCTGGCCACAAACCCAC +
Preference number: 4 (lower is better)
Translates to: PLSPLPSPRISSTQLYTVKYTHL*RWPQTH
Trigger: GTGGGTTTGTGGCCAGCGCCAAAGGTGTGTGTATTT...CACAGTGTAGAGTTGAGTGGAAGAGATTCTGGGACTTGGGAGAGGAGACAGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp ACTTTCAGGTCAGCACGAGTGAAGCGTGGTTTCCTGAGCTTGAAGGGCTCTGAAGCTGAAGGAATCGAGTaGGAGGGACTGTTCTCCTCT +
Preference number: 4 (lower is better)
Translates to: TFRSARVKRGFLSLKGSEAEGIE*EGLFSS
Trigger: AGAGGAGAACAGTCCCTCCCACTCGATTCCTTCAGC...TTCAGAGCCCTTCAAGCTCAGGAAACCACGCTTCACTCGTGCTGACCTGAAAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp ACTTTCAGGTCAGCACGAGTGAAGCGTGGTTTCCTGAGCTTGAAGGGCTCTGAAGAACACTGGAGCCTGTaGAGTTCCATTGCTGCACTG +
Preference number: 4 (lower is better)
Translates to: TFRSARVKRGFLSLKGSEEHWSL*SSIAAL
Trigger: CAGTGCAGCAATGGAACTCCACAGGCTCCAGTGTTC...TTCAGAGCCCTTCAAGCTCAGGAAACCACGCTTCACTCGTGCTGACCTGAAAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp CCCCTGTCTCCTCTCCCAAGTCCCAGAATCTCTTCCACTCAACTCTACACTGTGTCCAACCCTGCTTCATaGGTGCCCAAATCTAGGCAA +
Preference number: 4 (lower is better)
Translates to: PLSPLPSPRISSTQLYTVSNPAS*VPKSRQ
Trigger: TTGCCTAGATTTGGGCACCCATGAAGCAGGGTTGGA...CACAGTGTAGAGTTGAGTGGAAGAGATTCTGGGACTTGGGAGAGGAGACAGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp AACTTTTACAGCCACCCCTCTGGGAGTTGTACACACCTTTCAGTAGCCGAAGGGCCAGAACTTGCAGACTaGCACTGGCTCCCTTTTCCT +
Preference number: 4 (lower is better)
Translates to: NFYSHPSGSCTHLSVAEGPELAD*HWLPFP
Trigger: AGGAAAAGGGAGCCAGTGCCAGTCTGCAAGTTCTGG...CCCTTCGGCTACTGAAAGGTGTGTACAACTCCCAGAGGGGTGGCTGTAAAAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp ACTAAAGCGGTTTTAGAGAAATTGCAGGCAGCAACCCCACCCACTCCCTTTACCTTCTTGGACCAGTGCTaGCCAGGCAGATGGGTTGCT +
Preference number: 4 (lower is better)
Translates to: TKAVLEKLQAATPPTPFTFLDQC*PGRWVA
Trigger: AGCAACCCATCTGCCTGGCCAGCACTGGTCCAAGAA...GGTAAAGGGAGTGGGTGGGGTTGCTGCCTGCAATTTCTCTAAAACCGCTTTAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp CCACACTCGAGACTTGCAGATGCACGTGTGACGGTGCCATTCTTCGTATATGTTTTCTTGGACCAGTGCTaGCCAGGCAGATGGGTTGCT +
Preference number: 4 (lower is better)
Translates to: PHSRLADARVTVPFFVYVFLDQC*PGRWVA
Trigger: AGCAACCCATCTGCCTGGCCAGCACTGGTCCAAGAA...AACATATACGAAGAATGGCACCGTCACACGTGCATCTGCAAGTCTCGAGTGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR CCA 90 bp CCCGGCACCTCCACACTCTCCACACTCGAGACTTGCAGATGCACGTGTGACGGTAGAATTTGGTTGGTTTaGACCACTCCATTCTCCAAT +
Preference number: 4 (lower is better)
Translates to: PGTSTLSTLETCRCTCDGRIWLV*TTPFSN
Trigger: ATTGGAGAATGGAGTGGTCCAAACCAACCAAATTCT...ACCGTCACACGTGCATCTGCAAGTCTCGAGTGTGGAGAGTGTGGAGGTGCCGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR CCA 90 bp AACTGCAGGCCCCCTGGAATTTACCTGGCCATCAGACCTGCCAGCAACAGTGGCGTGCTAGAATTTGGTTaGTTTGGACCACTCCATTCT +
Preference number: 4 (lower is better)
Translates to: NCRPPGIYLAIRPASNSGVLEFG*FGPLHS
Trigger: AGAATGGAGTGGTCCAAACCAACCAAATTCTAGCAC...GCCACTGTTGCTGGCAGGTCTGATGGCCAGGTAAATTCCAGGGGGCCTGCAGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp TGTGCACGTGTCTCTGTGAGCACATTCACGGTGCATGCACCATTTTTGATGTCTAGCCCCCTGAGTTCTTaGTCTGTGTGGCAGCGCTCT +
Preference number: 4 (lower is better)
Translates to: CARVSVSTFTVHAPFLMSSPLSS*SVWQRS
Trigger: AGAGCGCTGCCACACAGACCAAGAACTCAGGGGGCT...AGACATCAAAAATGGTGCATGCACCGTGAATGTGCTCACAGAGACACGTGCACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp CCCCTGTCTCCTCTCCCAAGTCCCAGAATCTCTTCCACTCAACTCTACACTGTGCGATTTACTGGTCATTaGGGTGGGCAGGTTTGGTTC +
Preference number: 4 (lower is better)
Translates to: PLSPLPSPRISSTQLYTVRFTGH*GGQVWF
Trigger: GAACCAAACCTGCCCACCCCAATGACCAGTAAATCG...CACAGTGTAGAGTTGAGTGGAAGAGATTCTGGGACTTGGGAGAGGAGACAGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp ACTTTCAGGTCAGCACGAGTGAAGCGTGGTTTCCTGAGCTTGAAGGGCTCTGAACTGATGCCGATTTACTaGTCATTGGGGTGGGCAGGT +
Preference number: 4 (lower is better)
Translates to: TFRSARVKRGFLSLKGSELMPIY*SLGWAG
Trigger: ACCTGCCCACCCCAATGACCAGTAAATCGGCATCAG...TTCAGAGCCCTTCAAGCTCAGGAAACCACGCTTCACTCGTGCTGACCTGAAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp CAGCTGCCAGAATACTCACGGGTGCATCTTCATGCATGTTTGTCTACGTGGGTGGGACAATCCAAGCTTTaGTGGAAAAGACCCGGCACC +
Preference number: 4 (lower is better)
Translates to: QLPEYSRVHLHACLSTWVGQSKL*WKRPGT
Trigger: GGTGCCGGGTCTTTTCCACCAAAGCTTGGATTGTCC...CACCCACGTAGACAAACATGCATGAAGATGCACCCGTGAGTATTCTGGCAGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR TCA 90 bp TCTGGTGCATCTTTAATTCAGCAGCTGCCAGAATACTCACGGGTGCATCTTCATACTGGGGCCCCACATTaGAAAGACCTGGACTCAGGC +
Preference number: 4 (lower is better)
Translates to: SGASLIQQLPEYSRVHLHTGAPH*KDLDSG
Trigger: GCCTGAGTCCAGGTCTTTTCAATGTGGGGCCCCAGT...ATGAAGATGCACCCGTGAGTATTCTGGCAGCTGCTGAATTAAAGATGCACCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR TCA 90 bp ACTAAAGCGGTTTTAGAGAAATTGCAGGCAGCAACCCCACCCACTCCCTTTACCAGCATGGCAATTTGTTaGGGAGATAACTGGGGCCCC +
Preference number: 4 (lower is better)
Translates to: TKAVLEKLQAATPPTPFTSMAIC*GDNWGP
Trigger: GGGGCCCCAGTTATCTCCTCAACAAATTGCCATGCT...GGTAAAGGGAGTGGGTGGGGTTGCTGCCTGCAATTTCTCTAAAACCGCTTTAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp TCTGAACCAAGAAAGGTTGAGAGCTCCAGGTATTGTGTGGAGAACATTCTGGAGCCATGCCGCCAGAGCTaGAGCCAGAACCATATCCAG +
Preference number: 4 (lower is better)
Translates to: SEPRKVESSRYCVENILEPCRQS*SQNHIQ
Trigger: CTGGATATGGTTCTGGCTTCAGCTCTGGCGGCATGG...CTCCAGAATGTTCTCCACACAATACCTGGAGCTCTCAACCTTTCTTGGTTCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp CACACACATGTGCGTCCCCCTTGCTCAGGATGTCTGGGTGTATGTACGAAGGCAATCAGGGAACTTTGCTaGAGTGCTATGAACGTTGGT +
Preference number: 4 (lower is better)
Translates to: HTHVRPPCSGCLGVCTKAIRELC*SAMNVG
Trigger: ACCAACGTTCATAGCACTTCAGCAAAGTTCCCTGAT...TGCCTTCGTACATACACCCAGACATCCTGAGCAAGGGGGACGCACATGTGTGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp CTTTGGTGGAAAAGACCCGGCACCTCCACACTCTCCACACTCGAGACTTGCAGAATCAGGGAACTTTGCTaGAGTGCTATGAACGTTGGT +
Preference number: 4 (lower is better)
Translates to: LWWKRPGTSTLSTLETCRIRELC*SAMNVG
Trigger: ACCAACGTTCATAGCACTTCAGCAAAGTTCCCTGAT...TCTGCAAGTCTCGAGTGTGGAGAGTGTGGAGGTGCCGGGTCTTTTCCACCAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR TCA 90 bp AACTTTTACAGCCACCCCTCTGGGAGTTGTACACACCTTTCAGTAGCCGAAGGGGATCGTTCTCAAGGTTaGCCCATCAATCTGTGGGGT +
Preference number: 4 (lower is better)
Translates to: NFYSHPSGSCTHLSVAEGDRSQG*PINLWG
Trigger: ACCCCACAGATTGATGGGTCAACCTTGAGAACGATC...CCCTTCGGCTACTGAAAGGTGTGTACAACTCCCAGAGGGGTGGCTGTAAAAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp CAGCTGCCAGAATACTCACGGGTGCATCTTCATGCATGTTTGTCTACGTGGGTGGATCGTTCTCAAGGTTaGCCCATCAATCTGTGGGGT +
Preference number: 4 (lower is better)
Translates to: QLPEYSRVHLHACLSTWVDRSQG*PINLWG
Trigger: ACCCCACAGATTGATGGGTCAACCTTGAGAACGATC...CACCCACGTAGACAAACATGCATGAAGATGCACCCGTGAGTATTCTGGCAGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR TCA 90 bp AACTTTTACAGCCACCCCTCTGGGAGTTGTACACACCTTTCAGTAGCCGAAGGGAAACGTTTCTGTCAGTaGTGGCCTGGTGCTGTAACG +
Preference number: 4 (lower is better)
Translates to: NFYSHPSGSCTHLSVAEGKRFCQ*WPGAVT
Trigger: CGTTACAGCACCAGGCCATCACTGACAGAAACGTTT...CCCTTCGGCTACTGAAAGGTGTGTACAACTCCCAGAGGGGTGGCTGTAAAAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp GGGTTTATCTTAAAGATGGGGGCGAAGGGGGTGTCTGCAAAGAAGCAATTCAAATGCAGATGCCAAGTGTaGCCACCTACCCACAGAGGG +
Preference number: 4 (lower is better)
Translates to: GFILKMGAKGVSAKKQFKCRCQV*PPTHRG
Trigger: CCCTCTGTGGGTAGGTGGTCACACTTGGCATCTGCA...TTTGAATTGCTTCTTTGCAGACACCCCCTTCGCCCCCATCTTTAAGATAAACCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp AATGAAGCTGAAGGAATCGAGTGGGAGGGACTGTTCTCCTCTTTGGGGGAGCTCAGCTCTTCTCTTCCATaGCATCCTCACCATATCCTG +
Preference number: 4 (lower is better)
Translates to: NEAEGIEWEGLFSSLGELSSSLP*HPHHIL
Trigger: CAGGATATGGTGAGGATGTCATGGAAGAGAAGAGCT...GAGCTCCCCCAAAGAGGAGAACAGTCCCTCCCACTCGATTCCTTCAGCTTCATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp CAAAGGGTAAAAGCGTGCTGCCCGCTCTGCACACGGCAGAAGCTGGAAAATGCCTATGAATGTTGTAAATaGAACACGTCCAGGGTTGGG +
Preference number: 4 (lower is better)
Translates to: QRVKACCPLCTRQKLENAYECCK*NTSRVG
Trigger: CCCAACCCTGGACGTGTTTCATTTACAACATTCATA...GGCATTTTCCAGCTTCTGCCGTGTGCAGAGCGGGCAGCACGCTTTTACCCTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp ACTTTCAGGTCAGCACGAGTGAAGCGTGGTTTCCTGAGCTTGAAGGGCTCTGAAGGCGGTAGGAGGTTATaGCAAGAGACTGACAGCTTA +
Preference number: 4 (lower is better)
Translates to: TFRSARVKRGFLSLKGSEGGRRL*QETDSL
Trigger: TAAGCTGTCAGTCTCTTGTCATAACCTCCTACCGCC...TTCAGAGCCCTTCAAGCTCAGGAAACCACGCTTCACTCGTGCTGACCTGAAAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp AACTGCAGGCCCCCTGGAATTTACCTGGCCATCAGACCTGCCAGCAACAGTGGCTTTTGCAGCTTACTGTaGGCAGTAAAGAGGAATTTC +
Preference number: 4 (lower is better)
Translates to: NCRPPGIYLAIRPASNSGFCSLL*AVKRNF
Trigger: GAAATTCCTCTTTACTGCTCACAGTAAGCTGCAAAA...GCCACTGTTGCTGGCAGGTCTGATGGCCAGGTAAATTCCAGGGGGCCTGCAGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp AACTTTTACAGCCACCCCTCTGGGAGTTGTACACACCTTTCAGTAGCCGAAGGGAACAGCAACGTGATGTaGCGCCCATGTGGGAATGTA +
Preference number: 4 (lower is better)
Translates to: NFYSHPSGSCTHLSVAEGNSNVM*RPCGNV
Trigger: TACATTCCCACATGGGCGTCACATCACGTTGCTGTT...CCCTTCGGCTACTGAAAGGTGTGTACAACTCCCAGAGGGGTGGCTGTAAAAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp CCCCTGTCTCCTCTCCCAAGTCCCAGAATCTCTTCCACTCAACTCTACACTGTGTCTATCTCACTGTGCTaGCCTTACCACATTCGTCTC +
Preference number: 4 (lower is better)
Translates to: PLSPLPSPRISSTQLYTVSISLC*PYHIRL
Trigger: GAGACGAATGTGGTAAGGTCAGCACAGTGAGATAGA...CACAGTGTAGAGTTGAGTGGAAGAGATTCTGGGACTTGGGAGAGGAGACAGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp CACACACATGTGCGTCCCCCTTGCTCAGGATGTCTGGGTGTATGTACGAAGGCAAATCCAGCCTCTTTTTaGTGCCCTTTTCTGCACCTT +
Preference number: 4 (lower is better)
Translates to: HTHVRPPCSGCLGVCTKANPASF*CPFLHL
Trigger: AAGGTGCAGAAAAGGGCATCAAAAAGAGGCTGGATT...TGCCTTCGTACATACACCCAGACATCCTGAGCAAGGGGGACGCACATGTGTGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp CCTCCACACTCTCCACACTCGAGACTTGCAGATGCACGTGTGACGGTGCCATTCGTAGAGTTGGAAGATTaGACAGATTTAGCCTTAGGG +
Preference number: 4 (lower is better)
Translates to: PPHSPHSRLADARVTVPFVELED*TDLALG
Trigger: CCCTAAGGCTAAATCTGTTCAATCTTCCAACTCTAC...GAATGGCACCGTCACACGTGCATCTGCAAGTCTCGAGTGTGGAGAGTGTGGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR TCA 90 bp CCCCTGTCTCCTCTCCCAAGTCCCAGAATCTCTTCCACTCAACTCTACACTGTGCGCATTTTCCATCTTTaGCTGCTGTTCCCTGGATGT +
Preference number: 4 (lower is better)
Translates to: PLSPLPSPRISSTQLYTVRIFHL*LLFPGC
Trigger: ACATCCAGGGAACAGCAGTCAAAGATGGAAAATGCG...CACAGTGTAGAGTTGAGTGGAAGAGATTCTGGGACTTGGGAGAGGAGACAGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp ACTAAAGCGGTTTTAGAGAAATTGCAGGCAGCAACCCCACCCACTCCCTTTACCATCTCCAGTGCTTTGTaGAGGGGCATCAGTGCTCCT +
Preference number: 4 (lower is better)
Translates to: TKAVLEKLQAATPPTPFTISSAL*RGISAP
Trigger: AGGAGCACTGATGCCCCTTCACAAAGCACTGGAGAT...GGTAAAGGGAGTGGGTGGGGTTGCTGCCTGCAATTTCTCTAAAACCGCTTTAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp TCCCTAATGACTAAAGCTGACCGTCTGTTTGTTTGTATCCAACGGATAGCTTCTGCCCCAGCCAGTGTTTaGGAGCACCCTGGGGTCCAA +
Preference number: 4 (lower is better)
Translates to: SLMTKADRLFVCIQRIASAPASV*EHPGVQ
Trigger: TTGGACCCCAGGGTGCTCTCAAACACTGGCTGGGGC...AGAAGCTATCCGTTGGATACAAACAAACAGACGGTCAGCTTTAGTCATTAGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp TGGAATTCTGACGACTGGCCTCTGATATATACAGGACAATCCAAGCTTTGGTGGATGGTCTCCATCTCCTaGCCTTGTGATCTGCCCGCC +
Preference number: 4 (lower is better)
Translates to: WNSDDWPLIYTGQSKLWWMVSIS*PCDLPA
Trigger: GGCGGGCAGATCACAAGGTCAGGAGATGGAGACCAT...CCACCAAAGCTTGGATTGTCCTGTATATATCAGAGGCCAGTCGTCAGAATTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR GCA 90 bp AACTTTTACAGCCACCCCTCTGGGAGTTGTACACACCTTTCAGTAGCCGAAGGGCAGGAGGTGGAGTCTTaGCATGCCCTTCCATTACAA +
Preference number: 4 (lower is better)
Translates to: NFYSHPSGSCTHLSVAEGQEVES*HALPLQ
Trigger: TTGTAATGGAAGGGCATGGCAAGACTCCACCTCCTG...CCCTTCGGCTACTGAAAGGTGTGTACAACTCCCAGAGGGGTGGCTGTAAAAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301923.13
CDS-3UTR GCA 90 bp TGTGCACGTGTCTCTGTGAGCACATTCACGGTGCATGCACCATTTTTGATGTCTGACGGTGGAGGGGGCTaGCCACGTTTTAGTAACACT +
Preference number: 4 (lower is better)
Translates to: CARVSVSTFTVHAPFLMSDGGGG*PRFSNT
Trigger: AGTGTTACTAAAACGTGGGCAGCCCCCTCCACCGTC...AGACATCAAAAATGGTGCATGCACCGTGAATGTGCTCACAGAGACACGTGCACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp TCTGAACCAAGAAAGGTTGAGAGCTCCAGGTATTGTGTGGAGAACATTCTGGAGCTGGAGCAGGTGGTGTaGTTTTGCTCCAGACTGGCG +
Preference number: 4 (lower is better)
Translates to: SEPRKVESSRYCVENILELEQVV*FCSRLA
Trigger: CGCCAGTCTGGAGCAAAAGCACACCACCTGCTCCAG...CTCCAGAATGTTCTCCACACAATACCTGGAGCTCTCAACCTTTCTTGGTTCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301923.13
CDS-3UTR GCA 90 bp ACTTTCAGGTCAGCACGAGTGAAGCGTGGTTTCCTGAGCTTGAAGGGCTCTGAATGGTTCTGTAACAACTaGTGCTGTTGCTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: TFRSARVKRGFLSLKGSEWFCNN*CCCCCC
Trigger: GCAGCAGCAGCAACAGCAGCAGTTGTTACAGAACCA...TTCAGAGCCCTTCAAGCTCAGGAAACCACGCTTCACTCGTGCTGACCTGAAAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp TCTGAACCAAGAAAGGTTGAGAGCTCCAGGTATTGTGTGGAGAACATTCTGGAGCTGCTGCTGCTGCAGTaGACTCACCATTCGAGCCAG +
Preference number: 4 (lower is better)
Translates to: SEPRKVESSRYCVENILELLLLQ*THHSSQ
Trigger: CTGGCTCGAATGGTGAGTGCACTGCAGCAGCAGCAG...CTCCAGAATGTTCTCCACACAATACCTGGAGCTCTCAACCTTTCTTGGTTCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp TGGAATTCTGACGACTGGCCTCTGATATATACAGGACAATCCAAGCTTTGGTGGCCTTCCCACCAACCATaGCATAGTCCATGCCGCCAG +
Preference number: 4 (lower is better)
Translates to: WNSDDWPLIYTGQSKLWWPSHQP*HSPCRQ
Trigger: CTGGCGGCATGGACTATGGCATGGTTGGTGGGAAGG...CCACCAAAGCTTGGATTGTCCTGTATATATCAGAGGCCAGTCGTCAGAATTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR GCA 90 bp TGTGCACGTGTCTCTGTGAGCACATTCACGGTGCATGCACCATTTTTGATGTCTATCGGGGTGCTGTGCTaGTCCAGGGAGATGATGGTT +
Preference number: 4 (lower is better)
Translates to: CARVSVSTFTVHAPFLMSIGVLC*SREMMV
Trigger: AACCATCATCTCCCTGGAGCAGCACAGCACCCCGAT...AGACATCAAAAATGGTGCATGCACCGTGAATGTGCTCACAGAGACACGTGCACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp TCTGAACCAAGAAAGGTTGAGAGCTCCAGGTATTGTGTGGAGAACATTCTGGAGCTGATCGGGGTGCTGTaGTGCTCCAGGGAGATGATG +
Preference number: 4 (lower is better)
Translates to: SEPRKVESSRYCVENILELIGVL*CSREMM
Trigger: CATCATCTCCCTGGAGCAGCACAGCACCCCGATCAG...CTCCAGAATGTTCTCCACACAATACCTGGAGCTCTCAACCTTTCTTGGTTCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp TGGAATTCTGACGACTGGCCTCTGATATATACAGGACAATCCAAGCTTTGGTGGCCGCCTCCTGTTTGGTaGTGTATCGGATCAGGGCAG +
Preference number: 4 (lower is better)
Translates to: WNSDDWPLIYTGQSKLWWPPPVW*CIGSGQ
Trigger: CTGCCCTGATCCGATACAGCACCAAACAGGAGGCGG...CCACCAAAGCTTGGATTGTCCTGTATATATCAGAGGCCAGTCGTCAGAATTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR GCA 90 bp CCCCTGTCTCCTCTCCCAAGTCCCAGAATCTCTTCCACTCAACTCTACACTGTGAGAGACAGAGAAGGATaGACGCGAATGCACATGAAC +
Preference number: 4 (lower is better)
Translates to: PLSPLPSPRISSTQLYTVRDREG*TRMHMN
Trigger: GTTCATGTGCATTCGCGTGCATCCTTCTCTGTCTCT...CACAGTGTAGAGTTGAGTGGAAGAGATTCTGGGACTTGGGAGAGGAGACAGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp TGTGCACGTGTCTCTGTGAGCACATTCACGGTGCATGCACCATTTTTGATGTCTCATGTGCGTCCCCCTTaGTCAGGATGTCTGGGTGTA +
Preference number: 4 (lower is better)
Translates to: CARVSVSTFTVHAPFLMSHVRPP*SGCLGV
Trigger: TACACCCAGACATCCTGAGCAAGGGGGACGCACATG...AGACATCAAAAATGGTGCATGCACCGTGAATGTGCTCACAGAGACACGTGCACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp ACTAAAGCGGTTTTAGAGAAATTGCAGGCAGCAACCCCACCCACTCCCTTTACCACACACACACACATGTaGGTCCCCCTTGCTCAGGAT +
Preference number: 4 (lower is better)
Translates to: TKAVLEKLQAATPPTPFTTHTHM*VPLAQD
Trigger: ATCCTGAGCAAGGGGGACGCACATGTGTGTGTGTGT...GGTAAAGGGAGTGGGTGGGGTTGCTGCCTGCAATTTCTCTAAAACCGCTTTAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp CCCCTGTCTCCTCTCCCAAGTCCCAGAATCTCTTCCACTCAACTCTACACTGTGGCAAGCCTGTATCTATaGCAGAGTGTGGTAGAAGAG +
Preference number: 4 (lower is better)
Translates to: PLSPLPSPRISSTQLYTVASLYL*QSVVEE
Trigger: CTCTTCTACCACACTCTGGCATAGATACAGGCTTGC...CACAGTGTAGAGTTGAGTGGAAGAGATTCTGGGACTTGGGAGAGGAGACAGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp AACTGCAGGCCCCCTGGAATTTACCTGGCCATCAGACCTGCCAGCAACAGTGGCTGTTATCACAGGGTCTaGACTAACTCTGGAAATCTA +
Preference number: 4 (lower is better)
Translates to: NCRPPGIYLAIRPASNSGCYHRV*TNSGNL
Trigger: TAGATTTCCAGAGTTAGTGCAGACCCTGTGATAACA...GCCACTGTTGCTGGCAGGTCTGATGGCCAGGTAAATTCCAGGGGGCCTGCAGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp ATGCGGGCAGTGTGGGTGCTGAGCTGCTGGAGGAGTAGCTCTCCACTCCCTGACAATGCCTTGTTTACATaGATGAATGTGTCACAAGTA +
Preference number: 4 (lower is better)
Translates to: MRAVWVLSCWRSSSPLPDNALFT*MNVSQV
Trigger: TACTTGTGACACATTCATGCATGTAAACAAGGCATT...GTCAGGGAGTGGAGAGCTACTCCTCCAGCAGCTCAGCACCCACACTGCCCGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp AACTGCAGGCCCCCTGGAATTTACCTGGCCATCAGACCTGCCAGCAACAGTGGCACCCCCTTTGCAGAATaGATAGTTACAATTCACCTT +
Preference number: 4 (lower is better)
Translates to: NCRPPGIYLAIRPASNSGTPFAE*IVTIHL
Trigger: AAGGTGAATTGTAACTATGCATTCTGCAAAGGGGGT...GCCACTGTTGCTGGCAGGTCTGATGGCCAGGTAAATTCCAGGGGGCCTGCAGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp CCCCTGTCTCCTCTCCCAAGTCCCAGAATCTCTTCCACTCAACTCTACACTGTGCCTGTGGAGTTCCATTaGTGCACTGGATTAACACTG +
Preference number: 4 (lower is better)
Translates to: PLSPLPSPRISSTQLYTVPVEFH*CTGLTL
Trigger: CAGTGTTAATCCAGTGCAGCAATGGAACTCCACAGG...CACAGTGTAGAGTTGAGTGGAAGAGATTCTGGGACTTGGGAGAGGAGACAGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp ACTTTCAGGTCAGCACGAGTGAAGCGTGGTTTCCTGAGCTTGAAGGGCTCTGAAATACAGCCTGCCAAATaGAAGGGAAGCAGAGAGAGG +
Preference number: 4 (lower is better)
Translates to: TFRSARVKRGFLSLKGSEIQPAK*KGSRER
Trigger: CCTCTCTCTGCTTCCCTTGCATTTGGCAGGCTGTAT...TTCAGAGCCCTTCAAGCTCAGGAAACCACGCTTCACTCGTGCTGACCTGAAAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp ACTAAAGCGGTTTTAGAGAAATTGCAGGCAGCAACCCCACCCACTCCCTTTACCATAAGATCATGCCTGTaGAGCCCTGCACAGGCACGA +
Preference number: 4 (lower is better)
Translates to: TKAVLEKLQAATPPTPFTIRSCL*SPAQAR
Trigger: TCGTGCCTGTGCAGGGCTGCACAGGCATGATCTTAT...GGTAAAGGGAGTGGGTGGGGTTGCTGCCTGCAATTTCTCTAAAACCGCTTTAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp TGTGCACGTGTCTCTGTGAGCACATTCACGGTGCATGCACCATTTTTGATGTCTTTGCCCACACTGGAGTaGAGTGGTGCAATCTCGGCT +
Preference number: 4 (lower is better)
Translates to: CARVSVSTFTVHAPFLMSLPTLE*SGAISA
Trigger: AGCCGAGATTGCACCACTGCACTCCAGTGTGGGCAA...AGACATCAAAAATGGTGCATGCACCGTGAATGTGCTCACAGAGACACGTGCACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp AACTTTTACAGCCACCCCTCTGGGAGTTGTACACACCTTTCAGTAGCCGAAGGGACCCTGCTTCATGGGTaGCCAAATCTAGGCAAGCAA +
Preference number: 4 (lower is better)
Translates to: NFYSHPSGSCTHLSVAEGTLLHG*PNLGKQ
Trigger: TTGCTTGCCTAGATTTGGGCACCCATGAAGCAGGGT...CCCTTCGGCTACTGAAAGGTGTGTACAACTCCCAGAGGGGTGGCTGTAAAAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp ACTTTCAGGTCAGCACGAGTGAAGCGTGGTTTCCTGAGCTTGAAGGGCTCTGAAGATCCATTCCAACCCTaGTTCATGGGTGCCCAAATC +
Preference number: 4 (lower is better)
Translates to: TFRSARVKRGFLSLKGSEDPFQP*FMGAQI
Trigger: GATTTGGGCACCCATGAAGCAGGGTTGGAATGGATC...TTCAGAGCCCTTCAAGCTCAGGAAACCACGCTTCACTCGTGCTGACCTGAAAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp CAAAGGGTAAAAGCGTGCTGCCCGCTCTGCACACGGCAGAAGCTGGAAAATGCCCACATTCACGGTGCATaGACCATTTTTGATGTCTTC +
Preference number: 4 (lower is better)
Translates to: QRVKACCPLCTRQKLENAHIHGA*TIFDVF
Trigger: GAAGACATCAAAAATGGTGCATGCACCGTGAATGTG...GGCATTTTCCAGCTTCTGCCGTGTGCAGAGCGGGCAGCACGCTTTTACCCTTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp CAAAGGGTAAAAGCGTGCTGCCCGCTCTGCACACGGCAGAAGCTGGAAAATGCCTGTTACCTGTTTGTGTaGAAAGTTGGAAAGCTGCCT +
Preference number: 4 (lower is better)
Translates to: QRVKACCPLCTRQKLENACYLFV*KVGKLP
Trigger: AGGCAGCTTTCCAACTTTGCACACAAACAGGTAACA...GGCATTTTCCAGCTTCTGCCGTGTGCAGAGCGGGCAGCACGCTTTTACCCTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp ACTTTCAGGTCAGCACGAGTGAAGCGTGGTTTCCTGAGCTTGAAGGGCTCTGAAAAGCTAGGCTTGCATTaGCACCATTACCCCAAGTCC +
Preference number: 4 (lower is better)
Translates to: TFRSARVKRGFLSLKGSEKLGLH*HHYPKS
Trigger: GGACTTGGGGTAATGGTGGCAATGCAAGCCTAGCTT...TTCAGAGCCCTTCAAGCTCAGGAAACCACGCTTCACTCGTGCTGACCTGAAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp CTTTGGTGGAAAAGACCCGGCACCTCCACACTCTCCACACTCGAGACTTGCAGACTCCCCATGCTGAAGTaGCATCATCAATGTCCATTT +
Preference number: 4 (lower is better)
Translates to: LWWKRPGTSTLSTLETCRLPMLK*HHQCPF
Trigger: AAATGGACATTGATGATGGCACTTCAGCATGGGGAG...TCTGCAAGTCTCGAGTGTGGAGAGTGTGGAGGTGCCGGGTCTTTTCCACCAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR CCA 90 bp TCTGAACCAAGAAAGGTTGAGAGCTCCAGGTATTGTGTGGAGAACATTCTGGAGGTTGCCACCATTGACTaGTGGCGATGGAGAGCTGCC +
Preference number: 4 (lower is better)
Translates to: SEPRKVESSRYCVENILEVATID*WRWRAA
Trigger: GGCAGCTCTCCATCGCCACCAGTCAATGGTGGCAAC...CTCCAGAATGTTCTCCACACAATACCTGGAGCTCTCAACCTTTCTTGGTTCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp TCCCTAATGACTAAAGCTGACCGTCTGTTTGTTTGTATCCAACGGATAGCTTCTGAGCATGCAGGACGGTaGAGGGGGCTGCCCACGTTT +
Preference number: 4 (lower is better)
Translates to: SLMTKADRLFVCIQRIASEHAGR*RGLPTF
Trigger: AAACGTGGGCAGCCCCCTCCACCGTCCTGCATGCTC...AGAAGCTATCCGTTGGATACAAACAAACAGACGGTCAGCTTTAGTCATTAGGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp ACTTTCAGGTCAGCACGAGTGAAGCGTGGTTTCCTGAGCTTGAAGGGCTCTGAACACTTGTGCGTTGTTTaGGTTTGCTCCAGGTGCTGT +
Preference number: 4 (lower is better)
Translates to: TFRSARVKRGFLSLKGSEHLCVV*VCSRCC
Trigger: ACAGCACCTGGAGCAAACCCAAACAACGCACAAGTG...TTCAGAGCCCTTCAAGCTCAGGAAACCACGCTTCACTCGTGCTGACCTGAAAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp TGTGCACGTGTCTCTGTGAGCACATTCACGGTGCATGCACCATTTTTGATGTCTGCTTTTGCTCCAGACTaGCGCAGTCCCACTCTCACT +
Preference number: 4 (lower is better)
Translates to: CARVSVSTFTVHAPFLMSAFAPD*RSPTLT
Trigger: AGTGAGAGTGGGACTGCGCCAGTCTGGAGCAAAAGC...AGACATCAAAAATGGTGCATGCACCGTGAATGTGCTCACAGAGACACGTGCACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000301923.13
CDS-3UTR CCA 90 bp ACTTTCAGGTCAGCACGAGTGAAGCGTGGTTTCCTGAGCTTGAAGGGCTCTGAAAGGACTGCTTTCATTTaGCTCACCCCAAGCGGAAGT +
Preference number: 4 (lower is better)
Translates to: TFRSARVKRGFLSLKGSERTAFI*LTPSGS
Trigger: ACTTCCGCTTGGGGTGAGCCAAATGAAAGCAGTCCT...TTCAGAGCCCTTCAAGCTCAGGAAACCACGCTTCACTCGTGCTGACCTGAAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301923.13
ENST00000454349.7
CDS-3UTR CCA 90 bp AATGAAGCTGAAGGAATCGAGTGGGAGGGACTGTTCTCCTCTTTGGGGGAGCTCGTCTTTGGAATTAGGTaGACGGAACCCAGATCGATC +
Preference number: 4 (lower is better)
Translates to: NEAEGIEWEGLFSSLGELVFGIR*TEPRSI
Trigger: GATCGATCTGGGTTCCGTCCACCTAATTCCAAAGAC...GAGCTCCCCCAAAGAGGAGAACAGTCCCTCCCACTCGATTCCTTCAGCTTCATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp CCACACTCGAGACTTGCAGATGCACGTGTGACGGTGCCATTCTTCGTATATGTTCATGGCACTCCTGGTTaGAATTCTGGAGGCCAACTG +
Preference number: 4 (lower is better)
Translates to: PHSRLADARVTVPFFVYVHGTPG*NSGGQL
Trigger: CAGTTGGCCTCCAGAATTCCAACCAGGAGTGCCATG...AACATATACGAAGAATGGCACCGTCACACGTGCATCTGCAAGTCTCGAGTGTGG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR CCA 90 bp AACTTTTACAGCCACCCCTCTGGGAGTTGTACACACCTTTCAGTAGCCGAAGGGTCCCGCAGCAGTTGGTaGTCAGTATCTACAATGGGA +
Preference number: 4 (lower is better)
Translates to: NFYSHPSGSCTHLSVAEGSRSSW*SVSTMG
Trigger: TCCCATTGTAGATACTGACCACCAACTGCTGCGGGA...CCCTTCGGCTACTGAAAGGTGTGTACAACTCCCAGAGGGGTGGCTGTAAAAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp ACTTTCAGGTCAGCACGAGTGAAGCGTGGTTTCCTGAGCTTGAAGGGCTCTGAATCCCGCAGCAGTTGGTaGTCAGTATCTACAATGGGA +
Preference number: 4 (lower is better)
Translates to: TFRSARVKRGFLSLKGSESRSSW*SVSTMG
Trigger: TCCCATTGTAGATACTGACCACCAACTGCTGCGGGA...TTCAGAGCCCTTCAAGCTCAGGAAACCACGCTTCACTCGTGCTGACCTGAAAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp GCAGCTGCCAGAATACTCACGGGTGCATCTTCATGCATGTTTGTCTACGTGGGTTCCCGCAGCAGTTGGTaGTCAGTATCTACAATGGGA +
Preference number: 4 (lower is better)
Translates to: AAARILTGASSCMFVYVGSRSSW*SVSTMG
Trigger: TCCCATTGTAGATACTGACCACCAACTGCTGCGGGA...ACCCACGTAGACAAACATGCATGAAGATGCACCCGTGAGTATTCTGGCAGCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR CCA 90 bp TCTGGTGCATCTTTAATTCAGCAGCTGCCAGAATACTCACGGGTGCATCTTCATTGGCCGCCTCCTGTTTaGTGCTGTATCGGATCAGGG +
Preference number: 4 (lower is better)
Translates to: SGASLIQQLPEYSRVHLHWPPPV*CCIGSG
Trigger: CCCTGATCCGATACAGCACCAAACAGGAGGCGGCCA...ATGAAGATGCACCCGTGAGTATTCTGGCAGCTGCTGAATTAAAGATGCACCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR CCA 90 bp TCTGAACCAAGAAAGGTTGAGAGCTCCAGGTATTGTGTGGAGAACATTCTGGAGATGTGCAGTGCAGTTTaGGCCTTGGCCGCCTCCTGT +
Preference number: 4 (lower is better)
Translates to: SEPRKVESSRYCVENILEMCSAV*ALAASC
Trigger: ACAGGAGGCGGCCAAGGCCCAAACTGCACTGCACAT...CTCCAGAATGTTCTCCACACAATACCTGGAGCTCTCAACCTTTCTTGGTTCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp TCCCTAATGACTAAAGCTGACCGTCTGTTTGTTTGTATCCAACGGATAGCTTCTCCCACGGGATCTGACTaGTTCTGGCCGGTCTCCAGC +
Preference number: 4 (lower is better)
Translates to: SLMTKADRLFVCIQRIASPTGSD*FWPVSS
Trigger: GCTGGAGACCGGCCAGAACCAGTCAGATCCCGTGGG...AGAAGCTATCCGTTGGATACAAACAAACAGACGGTCAGCTTTAGTCATTAGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp CACACACATGTGCGTCCCCCTTGCTCAGGATGTCTGGGTGTATGTACGAAGGCATGGGCAGGTATTTGCTaGTACAAAATGTCGGCACTT +
Preference number: 4 (lower is better)
Translates to: HTHVRPPCSGCLGVCTKAWAGIC*YKMSAL
Trigger: AAGTGCCGACATTTTGTACCAGCAAATACCTGCCCA...TGCCTTCGTACATACACCCAGACATCCTGAGCAAGGGGGACGCACATGTGTGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp GGATTTTTGCTGTACCTTCCTGTTACCTGTTTGTGTGCAAAGTTGGAAAGCTGCACAGAGAGCGGTCAGTaGGGGCTGCTGGAAGCAGAG +
Preference number: 4 (lower is better)
Translates to: GFLLYLPVTCLCAKLESCTESGQ*GLLEAE
Trigger: CTCTGCTTCCAGCAGCCCCCACTGACCGCTCTCTGT...GCAGCTTTCCAACTTTGCACACAAACAGGTAACAGGAAGGTACAGCAAAAATCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp TCTGAACCAAGAAAGGTTGAGAGCTCCAGGTATTGTGTGGAGAACATTCTGGAGAAGCTGCTCTTCACCTaGTGGTCACCGCACGACAGC +
Preference number: 4 (lower is better)
Translates to: SEPRKVESSRYCVENILEKLLFT*WSPHDS
Trigger: GCTGTCGTGCGGTGACCACCAGGTGAAGAGCAGCTT...CTCCAGAATGTTCTCCACACAATACCTGGAGCTCTCAACCTTTCTTGGTTCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp ACTTTCAGGTCAGCACGAGTGAAGCGTGGTTTCCTGAGCTTGAAGGGCTCTGAACTTGGGATATGCTCCTaGCCCAGGGACACTAAGATT +
Preference number: 4 (lower is better)
Translates to: TFRSARVKRGFLSLKGSELGICS*PRDTKI
Trigger: AATCTTAGTGTCCCTGGGCCAGGAGCATATCCCAAG...TTCAGAGCCCTTCAAGCTCAGGAAACCACGCTTCACTCGTGCTGACCTGAAAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp AACTTTTACAGCCACCCCTCTGGGAGTTGTACACACCTTTCAGTAGCCGAAGGGCATCTGTGGAGTGACTaGACCACACACACACACATG +
Preference number: 4 (lower is better)
Translates to: NFYSHPSGSCTHLSVAEGHLWSD*TTHTHM
Trigger: CATGTGTGTGTGTGTGGTCCAGTCACTCCACAGATG...CCCTTCGGCTACTGAAAGGTGTGTACAACTCCCAGAGGGGTGGCTGTAAAAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp CAAAGGGTAAAAGCGTGCTGCCCGCTCTGCACACGGCAGAAGCTGGAAAATGCCAGAGAAAAACAGGCTTaGCGTAAGCATTTTGCTCAG +
Preference number: 4 (lower is better)
Translates to: QRVKACCPLCTRQKLENAREKQA*RKHFAQ
Trigger: CTGAGCAAAATGCTTACGCCAAGCCTGTTTTTCTCT...GGCATTTTCCAGCTTCTGCCGTGTGCAGAGCGGGCAGCACGCTTTTACCCTTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp TCTGAACCAAGAAAGGTTGAGAGCTCCAGGTATTGTGTGGAGAACATTCTGGAGTGGGTGCTGAGCTGCTaGAGGAGTAGCTCTCCACTC +
Preference number: 4 (lower is better)
Translates to: SEPRKVESSRYCVENILEWVLSC*RSSSPL
Trigger: GAGTGGAGAGCTACTCCTCCAGCAGCTCAGCACCCA...CTCCAGAATGTTCTCCACACAATACCTGGAGCTCTCAACCTTTCTTGGTTCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp TTAAGGGTTTACATTGCAGGGGGAAATGTACCTCGAGGTATTATTTTGTGTGAGCGCATGCGGGCAGTGTaGGTGCTGAGCTGCTGGAGG +
Preference number: 4 (lower is better)
Translates to: LRVYIAGGNVPRGIILCERMRAV*VLSCWR
Trigger: CCTCCAGCAGCTCAGCACCCACACTGCCCGCATGCG...CTCACACAAAATAATACCTCGAGGTACATTTCCCCCTGCAATGTAAACCCTTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp ACTAAAGCGGTTTTAGAGAAATTGCAGGCAGCAACCCCACCCACTCCCTTTACCGCTGAAGGAATCGAGTaGGAGGGACTGTTCTCCTCT +
Preference number: 4 (lower is better)
Translates to: TKAVLEKLQAATPPTPFTAEGIE*EGLFSS
Trigger: AGAGGAGAACAGTCCCTCCCACTCGATTCCTTCAGC...GGTAAAGGGAGTGGGTGGGGTTGCTGCCTGCAATTTCTCTAAAACCGCTTTAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp CCCCTGTCTCCTCTCCCAAGTCCCAGAATCTCTTCCACTCAACTCTACACTGTGGTTCCATTGCTGCACTaGATTAACACTGCACGGCTA +
Preference number: 4 (lower is better)
Translates to: PLSPLPSPRISSTQLYTVVPLLH*INTARL
Trigger: TAGCCGTGCAGTGTTAATCCAGTGCAGCAATGGAAC...CACAGTGTAGAGTTGAGTGGAAGAGATTCTGGGACTTGGGAGAGGAGACAGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp CCCCTGTCTCCTCTCCCAAGTCCCAGAATCTCTTCCACTCAACTCTACACTGTGACAGGGTTTACATACTaGTCTGCTGTCACTGTGTGG +
Preference number: 4 (lower is better)
Translates to: PLSPLPSPRISSTQLYTVTGFTY*SAVTVW
Trigger: CCACACAGTGACAGCAGACCAGTATGTAAACCCTGT...CACAGTGTAGAGTTGAGTGGAAGAGATTCTGGGACTTGGGAGAGGAGACAGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp TCTGAACCAAGAAAGGTTGAGAGCTCCAGGTATTGTGTGGAGAACATTCTGGAGCACACTGGAGTGCAGTaGTGCAATCTCGGCTCACCG +
Preference number: 4 (lower is better)
Translates to: SEPRKVESSRYCVENILEHTGVQ*CNLGSP
Trigger: CGGTGAGCCGAGATTGCACCACTGCACTCCAGTGTG...CTCCAGAATGTTCTCCACACAATACCTGGAGCTCTCAACCTTTCTTGGTTCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp CACACACATGTGCGTCCCCCTTGCTCAGGATGTCTGGGTGTATGTACGAAGGCAGATTGCTGGAAGAGATaGCAGCTATTTAAGACAGGG +
Preference number: 4 (lower is better)
Translates to: HTHVRPPCSGCLGVCTKADCWKR*QLFKTG
Trigger: CCCTGTCTTAAATAGCTGCCATCTCTTCCAGCAATC...TGCCTTCGTACATACACCCAGACATCCTGAGCAAGGGGGACGCACATGTGTGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp ACTAAAGCGGTTTTAGAGAAATTGCAGGCAGCAACCCCACCCACTCCCTTTACCAGTCCCTGCAGGGGATaGATCTGCTGGAAGAGAGAA +
Preference number: 4 (lower is better)
Translates to: TKAVLEKLQAATPPTPFTSPCRG*ICWKRE
Trigger: TTCTCTCTTCCAGCAGATCCATCCCCTGCAGGGACT...GGTAAAGGGAGTGGGTGGGGTTGCTGCCTGCAATTTCTCTAAAACCGCTTTAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp TGTGCACGTGTCTCTGTGAGCACATTCACGGTGCATGCACCATTTTTGATGTCTGTGTGGAGAACATTCTaGAGTCCCTGCAGGGGATGG +
Preference number: 4 (lower is better)
Translates to: CARVSVSTFTVHAPFLMSVWRTF*SPCRGW
Trigger: CCATCCCCTGCAGGGACTCCAGAATGTTCTCCACAC...AGACATCAAAAATGGTGCATGCACCGTGAATGTGCTCACAGAGACACGTGCACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp CAAAGGGTAAAAGCGTGCTGCCCGCTCTGCACACGGCAGAAGCTGGAAAATGCCATCAGCAAAGCCCTTTaGGAGCATTGTACAAGAGAT +
Preference number: 4 (lower is better)
Translates to: QRVKACCPLCTRQKLENAISKAL*EHCTRD
Trigger: ATCTCTTGTACAATGCTCCCAAAGGGCTTTGCTGAT...GGCATTTTCCAGCTTCTGCCGTGTGCAGAGCGGGCAGCACGCTTTTACCCTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp TCTGAACCAAGAAAGGTTGAGAGCTCCAGGTATTGTGTGGAGAACATTCTGGAGTGCAAAGGGTGGTGGTaGGGGGAGTGTCCCAGGAAA +
Preference number: 4 (lower is better)
Translates to: SEPRKVESSRYCVENILECKGWW*GECPRK
Trigger: TTTCCTGGGACACTCCCCCCACCACCACCCTTTGCA...CTCCAGAATGTTCTCCACACAATACCTGGAGCTCTCAACCTTTCTTGGTTCAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp AACTTTTACAGCCACCCCTCTGGGAGTTGTACACACCTTTCAGTAGCCGAAGGGTTGACTGCTGTTCCCTaGATGTCTGACCTACTGTGC +
Preference number: 4 (lower is better)
Translates to: NFYSHPSGSCTHLSVAEGLTAVP*MSDLLC
Trigger: GCACAGTAGGTCAGACATCCAGGGAACAGCAGTCAA...CCCTTCGGCTACTGAAAGGTGTGTACAACTCCCAGAGGGGTGGCTGTAAAAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp GGGTTTATCTTAAAGATGGGGGCGAAGGGGGTGTCTGCAAAGAAGCAATTCAAAAGTTCTTGGTCTGTGTaGCAGCGCTCTCCCACCCCT +
Preference number: 4 (lower is better)
Translates to: GFILKMGAKGVSAKKQFKSSWSV*QRSPTP
Trigger: AGGGGTGGGAGAGCGCTGCCACACAGACCAAGAACT...TTTGAATTGCTTCTTTGCAGACACCCCCTTCGCCCCCATCTTTAAGATAAACCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp TTAAGGGTTTACATTGCAGGGGGAAATGTACCTCGAGGTATTATTTTGTGTGAGTGGAGGTGGTGGGGGTaGGCCTCCCCACGAACCAGA +
Preference number: 4 (lower is better)
Translates to: LRVYIAGGNVPRGIILCEWRWWG*ASPRTR
Trigger: TCTGGTTCGTGGGGAGGCCCACCCCCACCACCTCCA...CTCACACAAAATAATACCTCGAGGTACATTTCCCCCTGCAATGTAAACCCTTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp CAGCTGCCAGAATACTCACGGGTGCATCTTCATGCATGTTTGTCTACGTGGGTGCGATTTACTGGTCATTaGGGTGGGCAGGTTTGGTTC +
Preference number: 4 (lower is better)
Translates to: QLPEYSRVHLHACLSTWVRFTGH*GGQVWF
Trigger: GAACCAAACCTGCCCACCCCAATGACCAGTAAATCG...CACCCACGTAGACAAACATGCATGAAGATGCACCCGTGAGTATTCTGGCAGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR CCA 90 bp CCACACTCGAGACTTGCAGATGCACGTGTGACGGTGCCATTCTTCGTATATGTTCTGATGCCGATTTACTaGTCATTGGGGTGGGCAGGT +
Preference number: 4 (lower is better)
Translates to: PHSRLADARVTVPFFVYVLMPIY*SLGWAG
Trigger: ACCTGCCCACCCCAATGACCAGTAAATCGGCATCAG...AACATATACGAAGAATGGCACCGTCACACGTGCATCTGCAAGTCTCGAGTGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR CCA 90 bp CTTTGGTGGAAAAGACCCGGCACCTCCACACTCTCCACACTCGAGACTTGCAGAAGGGTTTTACCATGTTaGCCAAGATGGTCTCCATCT +
Preference number: 4 (lower is better)
Translates to: LWWKRPGTSTLSTLETCRRVLPC*PRWSPS
Trigger: AGATGGAGACCATCTTGGCCAACATGGTAAAACCCT...TCTGCAAGTCTCGAGTGTGGAGAGTGTGGAGGTGCCGGGTCTTTTCCACCAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000446273.1
3UTR CAA 72 bp GAAACCTCTCCTCAGGTTGCTTTTGTTGTCTGTTTTTaGGTTACGCAGAACAGGGATGAGGTGGGTGGCGGG +
Preference number: 4 (lower is better)
Translates to: ETSPQVAFVVCF*VTQNRDEVGGG
Trigger: CCCGCCACCCACCTCATCCCTGTTCTGCGTAACCAAAAAACAGACAACAAAAGCAACCTGAGGAGAGGTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp TCTGAACCAAGAAAGGTTGAGAGCTCCAGGTATTGTGTGGAGAACATTCTGGAGTTGTCCCCAGCTTGCTaGGTTGTGGGAGGAAGCACT +
Preference number: 4 (lower is better)
Translates to: SEPRKVESSRYCVENILELSPAC*VVGGST
Trigger: AGTGCTTCCTCCCACAACTCAGCAAGCTGGGGACAA...CTCCAGAATGTTCTCCACACAATACCTGGAGCTCTCAACCTTTCTTGGTTCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp CACACACATGTGCGTCCCCCTTGCTCAGGATGTCTGGGTGTATGTACGAAGGCACAGCAATCCCATATTTaGAAACTGTTTGGCAAGAGG +
Preference number: 4 (lower is better)
Translates to: HTHVRPPCSGCLGVCTKAQQSHI*KLFGKR
Trigger: CCTCTTGCCAAACAGTTTTCAAATATGGGATTGCTG...TGCCTTCGTACATACACCCAGACATCCTGAGCAAGGGGGACGCACATGTGTGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp GGATTTTTGCTGTACCTTCCTGTTACCTGTTTGTGTGCAAAGTTGGAAAGCTGCACTGGGGCCCCACATTaGAAAGACCTGGACTCAGGC +
Preference number: 4 (lower is better)
Translates to: GFLLYLPVTCLCAKLESCTGAPH*KDLDSG
Trigger: GCCTGAGTCCAGGTCTTTTCAATGTGGGGCCCCAGT...GCAGCTTTCCAACTTTGCACACAAACAGGTAACAGGAAGGTACAGCAAAAATCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp GGATTTTTGCTGTACCTTCCTGTTACCTGTTTGTGTGCAAAGTTGGAAAGCTGCTTGGGCCCAACAGGATaGGAGGGCGAGTGCTTCATG +
Preference number: 4 (lower is better)
Translates to: GFLLYLPVTCLCAKLESCLGPTG*EGECFM
Trigger: CATGAAGCACTCGCCCTCTCATCCTGTTGGGCCCAA...GCAGCTTTCCAACTTTGCACACAAACAGGTAACAGGAAGGTACAGCAAAAATCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp ATATGTTCTGGTGCATCTTTAATTCAGCAGCTGCCAGAATACTCACGGGTGCATCCATGCCGCCAGAGCTaGAGCCAGAACCATATCCAG +
Preference number: 4 (lower is better)
Translates to: ICSGASLIQQLPEYSRVHPCRQS*SQNHIQ
Trigger: CTGGATATGGTTCTGGCTTCAGCTCTGGCGGCATGG...ATGCACCCGTGAGTATTCTGGCAGCTGCTGAATTAAAGATGCACCAGAACATAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR TCA 90 bp TCTGAACCAAGAAAGGTTGAGAGCTCCAGGTATTGTGTGGAGAACATTCTGGAGAAACTGGTTGTACGGTaGCCCTCCCCGGGTTTTACC +
Preference number: 4 (lower is better)
Translates to: SEPRKVESSRYCVENILEKLVVR*PSPGFT
Trigger: GGTAAAACCCGGGGAGGGTCACCGTACAACCAGTTT...CTCCAGAATGTTCTCCACACAATACCTGGAGCTCTCAACCTTTCTTGGTTCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp ACTTTCAGGTCAGCACGAGTGAAGCGTGGTTTCCTGAGCTTGAAGGGCTCTGAAGTGTGTCACCAGGGATaGTATCAAACTGGTTGTACG +
Preference number: 4 (lower is better)
Translates to: TFRSARVKRGFLSLKGSEVCHQG*YQTGCT
Trigger: CGTACAACCAGTTTGATATCATCCCTGGTGACACAC...TTCAGAGCCCTTCAAGCTCAGGAAACCACGCTTCACTCGTGCTGACCTGAAAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp GGGTTTATCTTAAAGATGGGGGCGAAGGGGGTGTCTGCAAAGAAGCAATTCAAAGCACACTTCCTGGGGTaGCATAGGGGTCAGATTCAG +
Preference number: 4 (lower is better)
Translates to: GFILKMGAKGVSAKKQFKAHFLG*HRGQIQ
Trigger: CTGAATCTGACCCCTATGTCACCCCAGGAAGTGTGC...TTTGAATTGCTTCTTTGCAGACACCCCCTTCGCCCCCATCTTTAAGATAAACCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp TGGAATTCTGACGACTGGCCTCTGATATATACAGGACAATCCAAGCTTTGGTGGGCACACTTCCTGGGGTaGCATAGGGGTCAGATTCAG +
Preference number: 4 (lower is better)
Translates to: WNSDDWPLIYTGQSKLWWAHFLG*HRGQIQ
Trigger: CTGAATCTGACCCCTATGTCACCCCAGGAAGTGTGC...CCACCAAAGCTTGGATTGTCCTGTATATATCAGAGGCCAGTCGTCAGAATTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR TCA 90 bp AATGAAGCTGAAGGAATCGAGTGGGAGGGACTGTTCTCCTCTTTGGGGGAGCTCATCAGGGAACTTTGCTaGAGTGCTATGAACGTTGGT +
Preference number: 4 (lower is better)
Translates to: NEAEGIEWEGLFSSLGELIRELC*SAMNVG
Trigger: ACCAACGTTCATAGCACTTCAGCAAAGTTCCCTGAT...GAGCTCCCCCAAAGAGGAGAACAGTCCCTCCCACTCGATTCCTTCAGCTTCATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp TTAAGGGTTTACATTGCAGGGGGAAATGTACCTCGAGGTATTATTTTGTGTGAGAGGTCCCACGGGATCTaGCTGGTTCTGGCCGGTCTC +
Preference number: 4 (lower is better)
Translates to: LRVYIAGGNVPRGIILCERSHGI*LVLAGL
Trigger: GAGACCGGCCAGAACCAGTCAGATCCCGTGGGACCT...CTCACACAAAATAATACCTCGAGGTACATTTCCCCCTGCAATGTAAACCCTTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp CAAAGGGTAAAAGCGTGCTGCCCGCTCTGCACACGGCAGAAGCTGGAAAATGCCACAAAAGGAAACGCTTaGAGTACACACTGGTTTAAG +
Preference number: 4 (lower is better)
Translates to: QRVKACCPLCTRQKLENATKGNA*STHWFK
Trigger: CTTAAACCAGTGTGTACTTCAAGCGTTTCCTTTTGT...GGCATTTTCCAGCTTCTGCCGTGTGCAGAGCGGGCAGCACGCTTTTACCCTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp GGGTTTATCTTAAAGATGGGGGCGAAGGGGGTGTCTGCAAAGAAGCAATTCAAAGAAGGGGCACGGTGGTaGTTCAAATTGCAGAGCAGG +
Preference number: 4 (lower is better)
Translates to: GFILKMGAKGVSAKKQFKEGARW*FKLQSR
Trigger: CCTGCTCTGCAATTTGAATCACCACCGTGCCCCTTC...TTTGAATTGCTTCTTTGCAGACACCCCCTTCGCCCCCATCTTTAAGATAAACCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp CCCCTGTCTCCTCTCCCAAGTCCCAGAATCTCTTCCACTCAACTCTACACTGTGCCTTCTCTAGATGTCTaGATACAAGCTGCTCTTCAC +
Preference number: 4 (lower is better)
Translates to: PLSPLPSPRISSTQLYTVPSLDV*IQAALH
Trigger: GTGAAGAGCAGCTTGTATTCAGACATCTAGAGAAGG...CACAGTGTAGAGTTGAGTGGAAGAGATTCTGGGACTTGGGAGAGGAGACAGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp TTAAGGGTTTACATTGCAGGGGGAAATGTACCTCGAGGTATTATTTTGTGTGAGCATGCTTGGGAATTCTaGCCCCTGGCCCCAGGAGGG +
Preference number: 4 (lower is better)
Translates to: LRVYIAGGNVPRGIILCEHAWEF*PLAPGG
Trigger: CCCTCCTGGGGCCAGGGGTCAGAATTCCCAAGCATG...CTCACACAAAATAATACCTCGAGGTACATTTCCCCCTGCAATGTAAACCCTTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp AACTGCAGGCCCCCTGGAATTTACCTGGCCATCAGACCTGCCAGCAACAGTGGCAATTTCCTTTATGGGTaGGTATCTTACATCTGTGGA +
Preference number: 4 (lower is better)
Translates to: NCRPPGIYLAIRPASNSGNFLYG*VSYICG
Trigger: TCCACAGATGTAAGATACTCACCCATAAAGGAAATT...GCCACTGTTGCTGGCAGGTCTGATGGCCAGGTAAATTCCAGGGGGCCTGCAGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp ACTTTCAGGTCAGCACGAGTGAAGCGTGGTTTCCTGAGCTTGAAGGGCTCTGAAGCGCAGCAGGGTTTGTaGGTTCCCTATTTTCTTAAC +
Preference number: 4 (lower is better)
Translates to: TFRSARVKRGFLSLKGSEAQQGL*VPYFLN
Trigger: GTTAAGAAAATAGGGAACTCACAAACCCTGCTGCGC...TTCAGAGCCCTTCAAGCTCAGGAAACCACGCTTCACTCGTGCTGACCTGAAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp CAAAGGGTAAAAGCGTGCTGCCCGCTCTGCACACGGCAGAAGCTGGAAAATGCCAATAGGGACCATTTCTaGAAATACACACACCTTTGG +
Preference number: 4 (lower is better)
Translates to: QRVKACCPLCTRQKLENANRDHF*KYTHLW
Trigger: CCAAAGGTGTGTGTATTTTCAGAAATGGTCCCTATT...GGCATTTTCCAGCTTCTGCCGTGTGCAGAGCGGGCAGCACGCTTTTACCCTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp ACTAAAGCGGTTTTAGAGAAATTGCAGGCAGCAACCCCACCCACTCCCTTTACCGGCGGTAGGAGGTTATaGCAAGAGACTGACAGCTTA +
Preference number: 4 (lower is better)
Translates to: TKAVLEKLQAATPPTPFTGGRRL*QETDSL
Trigger: TAAGCTGTCAGTCTCTTGTCATAACCTCCTACCGCC...GGTAAAGGGAGTGGGTGGGGTTGCTGCCTGCAATTTCTCTAAAACCGCTTTAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp AACTTTTACAGCCACCCCTCTGGGAGTTGTACACACCTTTCAGTAGCCGAAGGGGAGCTTGAAGGGCTCTaGATTCAGGAAAGGATGAGT +
Preference number: 4 (lower is better)
Translates to: NFYSHPSGSCTHLSVAEGELEGL*IQERMS
Trigger: ACTCATCCTTTCCTGAATTCAGAGCCCTTCAAGCTC...CCCTTCGGCTACTGAAAGGTGTGTACAACTCCCAGAGGGGTGGCTGTAAAAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp ACTAAAGCGGTTTTAGAGAAATTGCAGGCAGCAACCCCACCCACTCCCTTTACCGGCACGAGGAGACTGTaGTCAAGTCTGTTACTCGTT +
Preference number: 4 (lower is better)
Translates to: TKAVLEKLQAATPPTPFTGTRRL*SSLLLV
Trigger: AACGAGTAACAGACTTGATCACAGTCTCCTCGTGCC...GGTAAAGGGAGTGGGTGGGGTTGCTGCCTGCAATTTCTCTAAAACCGCTTTAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp CACACACATGTGCGTCCCCCTTGCTCAGGATGTCTGGGTGTATGTACGAAGGCACAGAGCATAACAAAGTaGCAAGGCTATGGATTCTAC +
Preference number: 4 (lower is better)
Translates to: HTHVRPPCSGCLGVCTKAQSITK*QGYGFY
Trigger: GTAGAATCCATAGCCTTGTCACTTTGTTATGCTCTG...TGCCTTCGTACATACACCCAGACATCCTGAGCAAGGGGGACGCACATGTGTGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp CCCCTGTCTCCTCTCCCAAGTCCCAGAATCTCTTCCACTCAACTCTACACTGTGAATCCAGCCTCTTTTTaGTGCCCTTTTCTGCACCTT +
Preference number: 4 (lower is better)
Translates to: PLSPLPSPRISSTQLYTVNPASF*CPFLHL
Trigger: AAGGTGCAGAAAAGGGCATCAAAAAGAGGCTGGATT...CACAGTGTAGAGTTGAGTGGAAGAGATTCTGGGACTTGGGAGAGGAGACAGGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp CCCCTGTCTCCTCTCCCAAGTCCCAGAATCTCTTCCACTCAACTCTACACTGTGGGAATTTGCATAATTTaGAGCAGCAGCACCTCCAAG +
Preference number: 4 (lower is better)
Translates to: PLSPLPSPRISSTQLYTVGICII*SSSTSK
Trigger: CTTGGAGGTGCTGCTGCTTCAAATTATGCAAATTCC...CACAGTGTAGAGTTGAGTGGAAGAGATTCTGGGACTTGGGAGAGGAGACAGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp GGGTTTATCTTAAAGATGGGGGCGAAGGGGGTGTCTGCAAAGAAGCAATTCAAAACCTTGTCCCAGATGTaGATTGGGTTGGGGGAGGTG +
Preference number: 4 (lower is better)
Translates to: GFILKMGAKGVSAKKQFKTLSQM*IGLGEV
Trigger: CACCTCCCCCAACCCAATTCACATCTGGGACAAGGT...TTTGAATTGCTTCTTTGCAGACACCCCCTTCGCCCCCATCTTTAAGATAAACCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp ACTTTCAGGTCAGCACGAGTGAAGCGTGGTTTCCTGAGCTTGAAGGGCTCTGAAGACCCAGTTGATTTCTaGACAGAAGCTCCTTTCCAG +
Preference number: 4 (lower is better)
Translates to: TFRSARVKRGFLSLKGSEDPVDF*TEAPFQ
Trigger: CTGGAAAGGAGCTTCTGTTCAGAAATCAACTGGGTC...TTCAGAGCCCTTCAAGCTCAGGAAACCACGCTTCACTCGTGCTGACCTGAAAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp ACTTTCAGGTCAGCACGAGTGAAGCGTGGTTTCCTGAGCTTGAAGGGCTCTGAATGTTTCCATTCTCCCTaGGAGACCCCAGATGTCATT +
Preference number: 4 (lower is better)
Translates to: TFRSARVKRGFLSLKGSECFHSP*ETPDVI
Trigger: AATGACATCTGGGGTCTCTCAGGGAGAATGGAAACA...TTCAGAGCCCTTCAAGCTCAGGAAACCACGCTTCACTCGTGCTGACCTGAAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp GCAGCTGCCAGAATACTCACGGGTGCATCTTCATGCATGTTTGTCTACGTGGGTTGTTTCCATTCTCCCTaGGAGACCCCAGATGTCATT +
Preference number: 4 (lower is better)
Translates to: AAARILTGASSCMFVYVGCFHSP*ETPDVI
Trigger: AATGACATCTGGGGTCTCTCAGGGAGAATGGAAACA...ACCCACGTAGACAAACATGCATGAAGATGCACCCGTGAGTATTCTGGCAGCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR TCA 90 bp CTCTCCACACTCGAGACTTGCAGATGCACGTGTGACGGTGCCATTCTTCGTATATTGCTTCCAGTGCTTTaGCCTCCAACTTCACTTCCT +
Preference number: 4 (lower is better)
Translates to: LSTLETCRCTCDGAILRILLPVL*PPTSLP
Trigger: AGGAAGTGAAGTTGGAGGTCAAAGCACTGGAAGCAA...TATACGAAGAATGGCACCGTCACACGTGCATCTGCAAGTCTCGAGTGTGGAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR GCA 90 bp CACACACATGTGCGTCCCCCTTGCTCAGGATGTCTGGGTGTATGTACGAAGGCATCTCCCTCATTGGTTTaGATGGGAACAGATTTTGTG +
Preference number: 4 (lower is better)
Translates to: HTHVRPPCSGCLGVCTKASPSLV*MGTDFV
Trigger: CACAAAATCTGTTCCCATGCAAACCAATGAGGGAGA...TGCCTTCGTACATACACCCAGACATCCTGAGCAAGGGGGACGCACATGTGTGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000301923.13
CDS-3UTR GCA 90 bp AACTTTTACAGCCACCCCTCTGGGAGTTGTACACACCTTTCAGTAGCCGAAGGGGGTGGAGTCTTGCCATaGCCTTCCATTACAAAATCC +
Preference number: 4 (lower is better)
Translates to: NFYSHPSGSCTHLSVAEGGGVLP*PSITKS
Trigger: GGATTTTGTAATGGAAGGGCATGGCAAGACTCCACC...CCCTTCGGCTACTGAAAGGTGTGTACAACTCCCAGAGGGGTGGCTGTAAAAGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000301923.13
CDS-3UTR GCA 90 bp GGGTTTATCTTAAAGATGGGGGCGAAGGGGGTGTCTGCAAAGAAGCAATTCAAAAACACTTTGTGGTCCTaGTGGCAACGGAATCGCGGC +
Preference number: 4 (lower is better)
Translates to: GFILKMGAKGVSAKKQFKNTLWS*WQRNRG
Trigger: GCCGCGATTCCGTTGCCAGCAGGACCACAAAGTGTT...TTTGAATTGCTTCTTTGCAGACACCCCCTTCGCCCCCATCTTTAAGATAAACCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp TTAAGGGTTTACATTGCAGGGGGAAATGTACCTCGAGGTATTATTTTGTGTGAGTGGGTTTGCTCCAGGTaGTGTGCAGGGAGGAGGCCC +
Preference number: 4 (lower is better)
Translates to: LRVYIAGGNVPRGIILCEWVCSR*CAGRRP
Trigger: GGGCCTCCTCCCTGCACAGCACCTGGAGCAAACCCA...CTCACACAAAATAATACCTCGAGGTACATTTCCCCCTGCAATGTAAACCCTTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp AACTGCAGGCCCCCTGGAATTTACCTGGCCATCAGACCTGCCAGCAACAGTGGCCAGACAAATCCATTTTaGTGCTTGGATTATCTTCAG +
Preference number: 4 (lower is better)
Translates to: NCRPPGIYLAIRPASNSGQTNPF*CLDYLQ
Trigger: CTGAAGATAATCCAAGCAGCAAAATGGATTTGTCTG...GCCACTGTTGCTGGCAGGTCTGATGGCCAGGTAAATTCCAGGGGGCCTGCAGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp ACTAAAGCGGTTTTAGAGAAATTGCAGGCAGCAACCCCACCCACTCCCTTTACCGAAGAATTTAGTGGCTaGACGGGTGTGTGCAGACCT +
Preference number: 4 (lower is better)
Translates to: TKAVLEKLQAATPPTPFTEEFSG*TGVCRP
Trigger: AGGTCTGCACACACCCGTGCAGCCACTAAATTCTTC...GGTAAAGGGAGTGGGTGGGGTTGCTGCCTGCAATTTCTCTAAAACCGCTTTAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp TCCCTAATGACTAAAGCTGACCGTCTGTTTGTTTGTATCCAACGGATAGCTTCTAGGGCGAGTGCTTCATaGCTGGCTGCCTCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: SLMTKADRLFVCIQRIASRASAS*LAASAA
Trigger: AGCAGCAGAGGCAGCCAGGCATGAAGCACTCGCCCT...AGAAGCTATCCGTTGGATACAAACAAACAGACGGTCAGCTTTAGTCATTAGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp TGGAATTCTGACGACTGGCCTCTGATATATACAGGACAATCCAAGCTTTGGTGGGTCAGCAGTGGGCCATaGTGCATGCAGATCGTTCTC +
Preference number: 4 (lower is better)
Translates to: WNSDDWPLIYTGQSKLWWVSSGP*CMQIVL
Trigger: GAGAACGATCTGCATGCAGCATGGCCCACTGCTGAC...CCACCAAAGCTTGGATTGTCCTGTATATATCAGAGGCCAGTCGTCAGAATTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR GCA 90 bp CCCCTGTCTCCTCTCCCAAGTCCCAGAATCTCTTCCACTCAACTCTACACTGTGCTGGGCAGTTACATGTaGCAGAACACACTGGTATTT +
Preference number: 4 (lower is better)
Translates to: PLSPLPSPRISSTQLYTVLGSYM*QNTLVF
Trigger: AAATACCAGTGTGTTCTGGCACATGTAACTGCCCAG...CACAGTGTAGAGTTGAGTGGAAGAGATTCTGGGACTTGGGAGAGGAGACAGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp CCCCTGTCTCCTCTCCCAAGTCCCAGAATCTCTTCCACTCAACTCTACACTGTGACAGATACTCAGATGTaGCTGGTGGCCATTCACTTA +
Preference number: 4 (lower is better)
Translates to: PLSPLPSPRISSTQLYTVTDTQM*LVAIHL
Trigger: TAAGTGAATGGCCACCAGGCACATCTGAGTATCTGT...CACAGTGTAGAGTTGAGTGGAAGAGATTCTGGGACTTGGGAGAGGAGACAGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp ACTAAAGCGGTTTTAGAGAAATTGCAGGCAGCAACCCCACCCACTCCCTTTACCTGGAAGCAGAGCTTTTaGATGGGGAACAGTGGTGGA +
Preference number: 4 (lower is better)
Translates to: TKAVLEKLQAATPPTPFTWKQSF*MGNSGG
Trigger: TCCACCACTGTTCCCCATGCAAAAGCTCTGCTTCCA...GGTAAAGGGAGTGGGTGGGGTTGCTGCCTGCAATTTCTCTAAAACCGCTTTAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp TCCCTAATGACTAAAGCTGACCGTCTGTTTGTTTGTATCCAACGGATAGCTTCTGCGGTCAGTGGGGGCTaGTGGAAGCAGAGCTTTTGC +
Preference number: 4 (lower is better)
Translates to: SLMTKADRLFVCIQRIASAVSGG*WKQSFC
Trigger: GCAAAAGCTCTGCTTCCAGCAGCCCCCACTGACCGC...AGAAGCTATCCGTTGGATACAAACAAACAGACGGTCAGCTTTAGTCATTAGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp TGTGCACGTGTCTCTGTGAGCACATTCACGGTGCATGCACCATTTTTGATGTCTACACACACACACATGTaGGTCCCCCTTGCTCAGGAT +
Preference number: 4 (lower is better)
Translates to: CARVSVSTFTVHAPFLMSTHTHM*VPLAQD
Trigger: ATCCTGAGCAAGGGGGACGCACATGTGTGTGTGTGT...AGACATCAAAAATGGTGCATGCACCGTGAATGTGCTCACAGAGACACGTGCACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp AACTGCAGGCCCCCTGGAATTTACCTGGCCATCAGACCTGCCAGCAACAGTGGCGACTTTCCAAATCACTaGAGTTGTCACAATTACACA +
Preference number: 4 (lower is better)
Translates to: NCRPPGIYLAIRPASNSGDFPNH*SCHNYT
Trigger: TGTGTAATTGTGACAACTGCAGTGATTTGGAAAGTC...GCCACTGTTGCTGGCAGGTCTGATGGCCAGGTAAATTCCAGGGGGCCTGCAGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp CACACACATGTGCGTCCCCCTTGCTCAGGATGTCTGGGTGTATGTACGAAGGCAAGTAGACATGGCTCTTaGCAAAGAATACCACGGAAA +
Preference number: 4 (lower is better)
Translates to: HTHVRPPCSGCLGVCTKASRHGS*QRIPRK
Trigger: TTTCCGTGGTATTCTTTGGCAAGAGCCATGTCTACT...TGCCTTCGTACATACACCCAGACATCCTGAGCAAGGGGGACGCACATGTGTGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp CACACACATGTGCGTCCCCCTTGCTCAGGATGTCTGGGTGTATGTACGAAGGCACAAATATTAGGGGTATaGCACAATCACTCGGGATCT +
Preference number: 4 (lower is better)
Translates to: HTHVRPPCSGCLGVCTKAQILGV*HNHSGS
Trigger: AGATCCCGAGTGATTGTGGCATACCCCTAATATTTG...TGCCTTCGTACATACACCCAGACATCCTGAGCAAGGGGGACGCACATGTGTGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp TCCCTAATGACTAAAGCTGACCGTCTGTTTGTTTGTATCCAACGGATAGCTTCTAGGGTAAAAGCGTGCTaGCCGCTCTGCACACGGCAG +
Preference number: 4 (lower is better)
Translates to: SLMTKADRLFVCIQRIASRVKAC*PLCTRQ
Trigger: CTGCCGTGTGCAGAGCGGGCAGCACGCTTTTACCCT...AGAAGCTATCCGTTGGATACAAACAAACAGACGGTCAGCTTTAGTCATTAGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp AACTTTTACAGCCACCCCTCTGGGAGTTGTACACACCTTTCAGTAGCCGAAGGGCCTCCCCACCCCCTTTaGAGAATGCATAGTTACAAT +
Preference number: 4 (lower is better)
Translates to: NFYSHPSGSCTHLSVAEGPPHPL*RMHSYN
Trigger: ATTGTAACTATGCATTCTGCAAAGGGGGTGGGGAGG...CCCTTCGGCTACTGAAAGGTGTGTACAACTCCCAGAGGGGTGGCTGTAAAAGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp ACTTTCAGGTCAGCACGAGTGAAGCGTGGTTTCCTGAGCTTGAAGGGCTCTGAAGTGGAGTTCCATTGCTaGACTGGATTAACACTGCAC +
Preference number: 4 (lower is better)
Translates to: TFRSARVKRGFLSLKGSEVEFHC*TGLTLH
Trigger: GTGCAGTGTTAATCCAGTGCAGCAATGGAACTCCAC...TTCAGAGCCCTTCAAGCTCAGGAAACCACGCTTCACTCGTGCTGACCTGAAAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp GGGTTTATCTTAAAGATGGGGGCGAAGGGGGTGTCTGCAAAGAAGCAATTCAAAGGACAAAGAAGAGGCTaGATGCAGACCTCCCCTGTC +
Preference number: 4 (lower is better)
Translates to: GFILKMGAKGVSAKKQFKGQRRG*MQTSPV
Trigger: GACAGGGGAGGTCTGCATGCAGCCTCTTCTTTGTCC...TTTGAATTGCTTCTTTGCAGACACCCCCTTCGCCCCCATCTTTAAGATAAACCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp TGTGCACGTGTCTCTGTGAGCACATTCACGGTGCATGCACCATTTTTGATGTCTACCCTGATAAGATCATaGCTGTGCAGCCCTGCACAG +
Preference number: 4 (lower is better)
Translates to: CARVSVSTFTVHAPFLMSTLIRS*LCSPAQ
Trigger: CTGTGCAGGGCTGCACAGGCATGATCTTATCAGGGT...AGACATCAAAAATGGTGCATGCACCGTGAATGTGCTCACAGAGACACGTGCACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp ACTTTCAGGTCAGCACGAGTGAAGCGTGGTTTCCTGAGCTTGAAGGGCTCTGAATCCCCCGACCTCCTCTaGTCTTTCTTCTTAAACATG +
Preference number: 4 (lower is better)
Translates to: TFRSARVKRGFLSLKGSESPDLL*SFFLNM
Trigger: CATGTTTAAGAAGAAAGAGCAGAGGAGGTCGGGGGA...TTCAGAGCCCTTCAAGCTCAGGAAACCACGCTTCACTCGTGCTGACCTGAAAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp ACTAAAGCGGTTTTAGAGAAATTGCAGGCAGCAACCCCACCCACTCCCTTTACCGTTTACATACTGGTCTaGTGTCACTGTGTGGGAGGC +
Preference number: 4 (lower is better)
Translates to: TKAVLEKLQAATPPTPFTVYILV*CHCVGG
Trigger: GCCTCCCACACAGTGACAGCAGACCAGTATGTAAAC...GGTAAAGGGAGTGGGTGGGGTTGCTGCCTGCAATTTCTCTAAAACCGCTTTAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp ACTTTCAGGTCAGCACGAGTGAAGCGTGGTTTCCTGAGCTTGAAGGGCTCTGAATTTGAGTCGAAGTCTTaGTCTGTTGCCCACACTGGA +
Preference number: 4 (lower is better)
Translates to: TFRSARVKRGFLSLKGSEFESKS*SVAHTG
Trigger: TCCAGTGTGGGCAACAGAGCAAGACTTCGACTCAAA...TTCAGAGCCCTTCAAGCTCAGGAAACCACGCTTCACTCGTGCTGACCTGAAAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp AACTTTTACAGCCACCCCTCTGGGAGTTGTACACACCTTTCAGTAGCCGAAGGGTTTGAGTCGAAGTCTTaGTCTGTTGCCCACACTGGA +
Preference number: 4 (lower is better)
Translates to: NFYSHPSGSCTHLSVAEGFESKS*SVAHTG
Trigger: TCCAGTGTGGGCAACAGAGCAAGACTTCGACTCAAA...CCCTTCGGCTACTGAAAGGTGTGTACAACTCCCAGAGGGGTGGCTGTAAAAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp CCCCTGTCTCCTCTCCCAAGTCCCAGAATCTCTTCCACTCAACTCTACACTGTGCAGTGCAAACCAAAATaGCAGGGACTACATCCTTCT +
Preference number: 4 (lower is better)
Translates to: PLSPLPSPRISSTQLYTVQCKPK*QGLHPS
Trigger: AGAAGGATGTAGTCCCTGGCATTTTGGTTTGCACTG...CACAGTGTAGAGTTGAGTGGAAGAGATTCTGGGACTTGGGAGAGGAGACAGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp AATGAAGCTGAAGGAATCGAGTGGGAGGGACTGTTCTCCTCTTTGGGGGAGCTCCAGTGCAAACCAAAATaGCAGGGACTACATCCTTCT +
Preference number: 4 (lower is better)
Translates to: NEAEGIEWEGLFSSLGELQCKPK*QGLHPS
Trigger: AGAAGGATGTAGTCCCTGGCATTTTGGTTTGCACTG...GAGCTCCCCCAAAGAGGAGAACAGTCCCTCCCACTCGATTCCTTCAGCTTCATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp CACACACATGTGCGTCCCCCTTGCTCAGGATGTCTGGGTGTATGTACGAAGGCACTATGGATTCTACAGTaGAAACCAAAATGCCAGGGA +
Preference number: 4 (lower is better)
Translates to: HTHVRPPCSGCLGVCTKALWILQ*KPKCQG
Trigger: TCCCTGGCATTTTGGTTTGCACTGTAGAATCCATAG...TGCCTTCGTACATACACCCAGACATCCTGAGCAAGGGGGACGCACATGTGTGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp ACTTTCAGGTCAGCACGAGTGAAGCGTGGTTTCCTGAGCTTGAAGGGCTCTGAATTCCAAGGTGAACAGTaGCCAAATCAGAAGGTGGGT +
Preference number: 4 (lower is better)
Translates to: TFRSARVKRGFLSLKGSEFQGEQ*PNQKVG
Trigger: ACCCACCTTCTGATTTGGGCACTGTTCACCTTGGAA...TTCAGAGCCCTTCAAGCTCAGGAAACCACGCTTCACTCGTGCTGACCTGAAAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp AACTTTTACAGCCACCCCTCTGGGAGTTGTACACACCTTTCAGTAGCCGAAGGGTTCCAAGGTGAACAGTaGCCAAATCAGAAGGTGGGT +
Preference number: 4 (lower is better)
Translates to: NFYSHPSGSCTHLSVAEGFQGEQ*PNQKVG
Trigger: ACCCACCTTCTGATTTGGGCACTGTTCACCTTGGAA...CCCTTCGGCTACTGAAAGGTGTGTACAACTCCCAGAGGGGTGGCTGTAAAAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp TGTGCACGTGTCTCTGTGAGCACATTCACGGTGCATGCACCATTTTTGATGTCTGGGTGCAGAATCTTGTaGACGTGTCTCTGTGAGCAC +
Preference number: 4 (lower is better)
Translates to: CARVSVSTFTVHAPFLMSGCRIL*TCLCEH
Trigger: GTGCTCACAGAGACACGTGCACAAGATTCTGCACCC...AGACATCAAAAATGGTGCATGCACCGTGAATGTGCTCACAGAGACACGTGCACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp GGGTTTATCTTAAAGATGGGGGCGAAGGGGGTGTCTGCAAAGAAGCAATTCAAAGTTTGGTTCTCGAGGTaGTGGGCCCCCTTGGGAATT +
Preference number: 4 (lower is better)
Translates to: GFILKMGAKGVSAKKQFKVWFSR*WAPLGI
Trigger: AATTCCCAAGGGGGCCCAGCACCTCGAGAACCAAAC...TTTGAATTGCTTCTTTGCAGACACCCCCTTCGCCCCCATCTTTAAGATAAACCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp TCTGGTGCATCTTTAATTCAGCAGCTGCCAGAATACTCACGGGTGCATCTTCATTACTCACATGTGCAGTaGAGTTTGGGCCTTGGCCGC +
Preference number: 4 (lower is better)
Translates to: SGASLIQQLPEYSRVHLHYSHVQ*SLGLGR
Trigger: GCGGCCAAGGCCCAAACTGCACTGCACATGTGAGTA...ATGAAGATGCACCCGTGAGTATTCTGGCAGCTGCTGAATTAAAGATGCACCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR CCA 90 bp TCCCTAATGACTAAAGCTGACCGTCTGTTTGTTTGTATCCAACGGATAGCTTCTCTTCTCCGCAGACTATaGAGGCGACGTCGTAGGGGG +
Preference number: 4 (lower is better)
Translates to: SLMTKADRLFVCIQRIASLLRRL*RRRRRG
Trigger: CCCCCTACGACGTCGCCTCCATAGTCTGCGGAGAAG...AGAAGCTATCCGTTGGATACAAACAAACAGACGGTCAGCTTTAGTCATTAGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301923.13
CDS-3UTR CCA 90 bp GGATTTTTGCTGTACCTTCCTGTTACCTGTTTGTGTGCAAAGTTGGAAAGCTGCAGCTGCCAATTGGGCTaGCGGCCGTTGGTTGGCTTA +
Preference number: 4 (lower is better)
Translates to: GFLLYLPVTCLCAKLESCSCQLG*RPLVGL
Trigger: TAAGCCAACCAACGGCCGCCAGCCCAATTGGCAGCT...GCAGCTTTCCAACTTTGCACACAAACAGGTAACAGGAAGGTACAGCAAAAATCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp CACACACATGTGCGTCCCCCTTGCTCAGGATGTCTGGGTGTATGTACGAAGGCATTTAGTAACACTTTGTaGTCCTGCTGGCAACGGAAT +
Preference number: 4 (lower is better)
Translates to: HTHVRPPCSGCLGVCTKAFSNTL*SCWQRN
Trigger: ATTCCGTTGCCAGCAGGACCACAAAGTGTTACTAAA...TGCCTTCGTACATACACCCAGACATCCTGAGCAAGGGGGACGCACATGTGTGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp ACTTTCAGGTCAGCACGAGTGAAGCGTGGTTTCCTGAGCTTGAAGGGCTCTGAAGTCTTTGGAATTAGGTaGACGGAACCCAGATCGATC +
Preference number: 4 (lower is better)
Translates to: TFRSARVKRGFLSLKGSEVFGIR*TEPRSI
Trigger: GATCGATCTGGGTTCCGTCCACCTAATTCCAAAGAC...TTCAGAGCCCTTCAAGCTCAGGAAACCACGCTTCACTCGTGCTGACCTGAAAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp AATGAAGCTGAAGGAATCGAGTGGGAGGGACTGTTCTCCTCTTTGGGGGAGCTCGGAATTTGTGGAAGCTaGCTCAGCATGGCAATTTGT +
Preference number: 4 (lower is better)
Translates to: NEAEGIEWEGLFSSLGELGICGS*LSMAIC
Trigger: ACAAATTGCCATGCTGAGCCAGCTTCCACAAATTCC...GAGCTCCCCCAAAGAGGAGAACAGTCCCTCCCACTCGATTCCTTCAGCTTCATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp TGTGCACGTGTCTCTGTGAGCACATTCACGGTGCATGCACCATTTTTGATGTCTCAGGTATTGGCCCTTTaGTTTGAAGGTCTGGGAGCC +
Preference number: 4 (lower is better)
Translates to: CARVSVSTFTVHAPFLMSQVLAL*FEGLGA
Trigger: GGCTCCCAGACCTTCAAACCAAAGGGCCAATACCTG...AGACATCAAAAATGGTGCATGCACCGTGAATGTGCTCACAGAGACACGTGCACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp CCCCTGTCTCCTCTCCCAAGTCCCAGAATCTCTTCCACTCAACTCTACACTGTGACCATATCCAGGTATTaGCCCTTTGGTTTGAAGGTC +
Preference number: 4 (lower is better)
Translates to: PLSPLPSPRISSTQLYTVTISRY*PFGLKV
Trigger: GACCTTCAAACCAAAGGGCCAATACCTGGATATGGT...CACAGTGTAGAGTTGAGTGGAAGAGATTCTGGGACTTGGGAGAGGAGACAGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp AATTCAGCAGCTGCCAGAATACTCACGGGTGCATCTTCATGCATGTTTGTCTACTATTGGCTTCCTGTGTaGCTACAGAGGGCAGCCCCT +
Preference number: 4 (lower is better)
Translates to: NSAAARILTGASSCMFVYYWLPV*LQRAAP
Trigger: AGGGGCTGCCCTCTGTAGCCACACAGGAAGCCAATA...GTAGACAAACATGCATGAAGATGCACCCGTGAGTATTCTGGCAGCTGCTGAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR CCA 90 bp CACACACATGTGCGTCCCCCTTGCTCAGGATGTCTGGGTGTATGTACGAAGGCACATTTTTGTGCATATTaGCTTCCTGTGTGGCTACAG +
Preference number: 4 (lower is better)
Translates to: HTHVRPPCSGCLGVCTKAHFCAY*LPVWLQ
Trigger: CTGTAGCCACACAGGAAGCCAATATGCACAAAAATG...TGCCTTCGTACATACACCCAGACATCCTGAGCAAGGGGGACGCACATGTGTGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp TGTGCACGTGTCTCTGTGAGCACATTCACGGTGCATGCACCATTTTTGATGTCTCATGGCACTCCTGGTTaGAATTCTGGAGGCCAACTG +
Preference number: 4 (lower is better)
Translates to: CARVSVSTFTVHAPFLMSHGTPG*NSGGQL
Trigger: CAGTTGGCCTCCAGAATTCCAACCAGGAGTGCCATG...AGACATCAAAAATGGTGCATGCACCGTGAATGTGCTCACAGAGACACGTGCACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp GCAGCTGCCAGAATACTCACGGGTGCATCTTCATGCATGTTTGTCTACGTGGGTTGGGTTAGATTCAGATaGAATGTCAGCAGTGGGCCA +
Preference number: 4 (lower is better)
Translates to: AAARILTGASSCMFVYVGWVRFR*NVSSGP
Trigger: TGGCCCACTGCTGACATTCCATCTGAATCTAACCCA...ACCCACGTAGACAAACATGCATGAAGATGCACCCGTGAGTATTCTGGCAGCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR CCA 90 bp ACTTTCAGGTCAGCACGAGTGAAGCGTGGTTTCCTGAGCTTGAAGGGCTCTGAATGGGTTAGATTCAGATaGAATGTCAGCAGTGGGCCA +
Preference number: 4 (lower is better)
Translates to: TFRSARVKRGFLSLKGSEWVRFR*NVSSGP
Trigger: TGGCCCACTGCTGACATTCCATCTGAATCTAACCCA...TTCAGAGCCCTTCAAGCTCAGGAAACCACGCTTCACTCGTGCTGACCTGAAAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp TCTGACGACTGGCCTCTGATATATACAGGACAATCCAAGCTTTGGTGGAAAAGAATGTGCAGTGCAGTTTaGGCCTTGGCCGCCTCCTGT +
Preference number: 4 (lower is better)
Translates to: SDDWPLIYTGQSKLWWKRMCSAV*ALAASC
Trigger: ACAGGAGGCGGCCAAGGCCCAAACTGCACTGCACAT...TCTTTTCCACCAAAGCTTGGATTGTCCTGTATATATCAGAGGCCAGTCGTCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR CCA 90 bp TCCCTAATGACTAAAGCTGACCGTCTGTTTGTTTGTATCCAACGGATAGCTTCTGGATCTGACTGGTTCTaGCCGGTCTCCAGCGACTGC +
Preference number: 4 (lower is better)
Translates to: SLMTKADRLFVCIQRIASGSDWF*PVSSDC
Trigger: GCAGTCGCTGGAGACCGGCCAGAACCAGTCAGATCC...AGAAGCTATCCGTTGGATACAAACAAACAGACGGTCAGCTTTAGTCATTAGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp TGTGCACGTGTCTCTGTGAGCACATTCACGGTGCATGCACCATTTTTGATGTCTAAAATAAAAAGCAGATaGGCCGGCCAGCCAGCCTGC +
Preference number: 4 (lower is better)
Translates to: CARVSVSTFTVHAPFLMSKIKSR*AGQPAC
Trigger: GCAGGCTGGCTGGCCGGCCCATCTGCTTTTTATTTT...AGACATCAAAAATGGTGCATGCACCGTGAATGTGCTCACAGAGACACGTGCACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp GGATTTTTGCTGTACCTTCCTGTTACCTGTTTGTGTGCAAAGTTGGAAAGCTGCCTGCTCTTCACCTGGTaGTCACCGCACGACAGCACT +
Preference number: 4 (lower is better)
Translates to: GFLLYLPVTCLCAKLESCLLFTW*SPHDST
Trigger: AGTGCTGTCGTGCGGTGACCACCAGGTGAAGAGCAG...GCAGCTTTCCAACTTTGCACACAAACAGGTAACAGGAAGGTACAGCAAAAATCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp TCCCTAATGACTAAAGCTGACCGTCTGTTTGTTTGTATCCAACGGATAGCTTCTAACCAAGAGCGGCAGTaGACAGGGTCGCCACTGGCT +
Preference number: 4 (lower is better)
Translates to: SLMTKADRLFVCIQRIASNQERQ*TGSPLA
Trigger: AGCCAGTGGCGACCCTGTCCACTGCCGCTCTTGGTT...AGAAGCTATCCGTTGGATACAAACAAACAGACGGTCAGCTTTAGTCATTAGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp GGGTTTATCTTAAAGATGGGGGCGAAGGGGGTGTCTGCAAAGAAGCAATTCAAAGGGAATTCTGACCCCTaGCCCCAGGAGGGAATACAA +
Preference number: 4 (lower is better)
Translates to: GFILKMGAKGVSAKKQFKGNSDP*PQEGIQ
Trigger: TTGTATTCCCTCCTGGGGCCAGGGGTCAGAATTCCC...TTTGAATTGCTTCTTTGCAGACACCCCCTTCGCCCCCATCTTTAAGATAAACCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp ACTAAAGCGGTTTTAGAGAAATTGCAGGCAGCAACCCCACCCACTCCCTTTACCCATCTGTGGAGTGACTaGACCACACACACACACATG +
Preference number: 4 (lower is better)
Translates to: TKAVLEKLQAATPPTPFTHLWSD*TTHTHM
Trigger: CATGTGTGTGTGTGTGGTCCAGTCACTCCACAGATG...GGTAAAGGGAGTGGGTGGGGTTGCTGCCTGCAATTTCTCTAAAACCGCTTTAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp CCCCTGTCTCCTCTCCCAAGTCCCAGAATCTCTTCCACTCAACTCTACACTGTGAGTATCTTACATCTGTaGAGTGACTGGACCACACAC +
Preference number: 4 (lower is better)
Translates to: PLSPLPSPRISSTQLYTVSILHL*SDWTTH
Trigger: GTGTGTGGTCCAGTCACTCCACAGATGTAAGATACT...CACAGTGTAGAGTTGAGTGGAAGAGATTCTGGGACTTGGGAGAGGAGACAGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp CAAAGGGTAAAAGCGTGCTGCCCGCTCTGCACACGGCAGAAGCTGGAAAATGCCTCACAATTACACACCTaGAGGAATCAATGCACAGTA +
Preference number: 4 (lower is better)
Translates to: QRVKACCPLCTRQKLENASQLHT*RNQCTV
Trigger: TACTGTGCATTGATTCCTCCAGGTGTGTAATTGTGA...GGCATTTTCCAGCTTCTGCCGTGTGCAGAGCGGGCAGCACGCTTTTACCCTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp TGTGCACGTGTCTCTGTGAGCACATTCACGGTGCATGCACCATTTTTGATGTCTAAACACGTCCAGGGTTaGGGACTGAGGGATCAGAGA +
Preference number: 4 (lower is better)
Translates to: CARVSVSTFTVHAPFLMSKHVQG*GLRDQR
Trigger: TCTCTGATCCCTCAGTCCCCAACCCTGGACGTGTTT...AGACATCAAAAATGGTGCATGCACCGTGAATGTGCTCACAGAGACACGTGCACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp CAAAGGGTAAAAGCGTGCTGCCCGCTCTGCACACGGCAGAAGCTGGAAAATGCCTCATGTCAGAAGAGGTaGGAAAATTCTTACAACAGG +
Preference number: 4 (lower is better)
Translates to: QRVKACCPLCTRQKLENASCQKR*ENSYNR
Trigger: CCTGTTGTAAGAATTTTCCCACCTCTTCTGACATGA...GGCATTTTCCAGCTTCTGCCGTGTGCAGAGCGGGCAGCACGCTTTTACCCTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp AATGAAGCTGAAGGAATCGAGTGGGAGGGACTGTTCTCCTCTTTGGGGGAGCTCCAACCCACAGGAGTTTaGAAGAACCGATTGCTAACT +
Preference number: 4 (lower is better)
Translates to: NEAEGIEWEGLFSSLGELQPTGV*KNRLLT
Trigger: AGTTAGCAATCGGTTCTTCCAAACTCCTGTGGGTTG...GAGCTCCCCCAAAGAGGAGAACAGTCCCTCCCACTCGATTCCTTCAGCTTCATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp TCCCTAATGACTAAAGCTGACCGTCTGTTTGTTTGTATCCAACGGATAGCTTCTCAATCACTCGGGATCTaGTCCCGGTGGCCACACGCA +
Preference number: 4 (lower is better)
Translates to: SLMTKADRLFVCIQRIASQSLGI*SRWPHA
Trigger: TGCGTGTGGCCACCGGGACCAGATCCCGAGTGATTG...AGAAGCTATCCGTTGGATACAAACAAACAGACGGTCAGCTTTAGTCATTAGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp CACACACATGTGCGTCCCCCTTGCTCAGGATGTCTGGGTGTATGTACGAAGGCACACCTTTCCCATTTTTaGCGAACACACATAGGATGT +
Preference number: 4 (lower is better)
Translates to: HTHVRPPCSGCLGVCTKAHLSHF*RTHIGC
Trigger: ACATCCTATGTGTGTTCGCCAAAAATGGGAAAGGTG...TGCCTTCGTACATACACCCAGACATCCTGAGCAAGGGGGACGCACATGTGTGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp TCTGAACCAAGAAAGGTTGAGAGCTCCAGGTATTGTGTGGAGAACATTCTGGAGGATGTGACGCCCATGTaGGAATGTAATGGCCGCCTC +
Preference number: 4 (lower is better)
Translates to: SEPRKVESSRYCVENILEDVTPM*ECNGRL
Trigger: GAGGCGGCCATTACATTCCCACATGGGCGTCACATC...CTCCAGAATGTTCTCCACACAATACCTGGAGCTCTCAACCTTTCTTGGTTCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp GGGTTTATCTTAAAGATGGGGGCGAAGGGGGTGTCTGCAAAGAAGCAATTCAAAGAACTGCAGGCCCCCTaGAATTTACCTGGCCATCAG +
Preference number: 4 (lower is better)
Translates to: GFILKMGAKGVSAKKQFKELQAP*NLPGHQ
Trigger: CTGATGGCCAGGTAAATTCCAGGGGGCCTGCAGTTC...TTTGAATTGCTTCTTTGCAGACACCCCCTTCGCCCCCATCTTTAAGATAAACCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp TGTGCACGTGTCTCTGTGAGCACATTCACGGTGCATGCACCATTTTTGATGTCTGAACACTGGAGCCTGTaGAGTTCCATTGCTGCACTG +
Preference number: 4 (lower is better)
Translates to: CARVSVSTFTVHAPFLMSEHWSL*SSIAAL
Trigger: CAGTGCAGCAATGGAACTCCACAGGCTCCAGTGTTC...AGACATCAAAAATGGTGCATGCACCGTGAATGTGCTCACAGAGACACGTGCACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp AATGAAGCTGAAGGAATCGAGTGGGAGGGACTGTTCTCCTCTTTGGGGGAGCTCAGGGGATGGATCTGCTaGAAGAGAGAAATTCAGACA +
Preference number: 4 (lower is better)
Translates to: NEAEGIEWEGLFSSLGELRGWIC*KREIQT
Trigger: TGTCTGAATTTCTCTCTTCCAGCAGATCCATCCCCT...GAGCTCCCCCAAAGAGGAGAACAGTCCCTCCCACTCGATTCCTTCAGCTTCATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp AACTGCAGGCCCCCTGGAATTTACCTGGCCATCAGACCTGCCAGCAACAGTGGCAAATCAGAAGGTGGGTaGATAATATGCATGCACTTA +
Preference number: 4 (lower is better)
Translates to: NCRPPGIYLAIRPASNSGKSEGG*IICMHL
Trigger: TAAGTGCATGCATATTATCCACCCACCTTCTGATTT...GCCACTGTTGCTGGCAGGTCTGATGGCCAGGTAAATTCCAGGGGGCCTGCAGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp AATGAAGCTGAAGGAATCGAGTGGGAGGGACTGTTCTCCTCTTTGGGGGAGCTCGCCCAAATCAGAAGGTaGGTGGATAATATGCATGCA +
Preference number: 4 (lower is better)
Translates to: NEAEGIEWEGLFSSLGELAQIRR*VDNMHA
Trigger: TGCATGCATATTATCCACCCACCTTCTGATTTGGGC...GAGCTCCCCCAAAGAGGAGAACAGTCCCTCCCACTCGATTCCTTCAGCTTCATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp AATGAAGCTGAAGGAATCGAGTGGGAGGGACTGTTCTCCTCTTTGGGGGAGCTCTCACTGCATACACTTTaGTCACTGGTGTGTGCAAAG +
Preference number: 4 (lower is better)
Translates to: NEAEGIEWEGLFSSLGELSLHTL*SLVCAK
Trigger: CTTTGCACACACCAGTGACCAAAGTGTATGCAGTGA...GAGCTCCCCCAAAGAGGAGAACAGTCCCTCCCACTCGATTCCTTCAGCTTCATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp ACTTTCAGGTCAGCACGAGTGAAGCGTGGTTTCCTGAGCTTGAAGGGCTCTGAACTTGCAGACTGGCACTaGCTCCCTTTTCCTTTGTTA +
Preference number: 4 (lower is better)
Translates to: TFRSARVKRGFLSLKGSELADWH*LPFPLL
Trigger: TAACAAAGGAAAAGGGAGCCAGTGCCAGTCTGCAAG...TTCAGAGCCCTTCAAGCTCAGGAAACCACGCTTCACTCGTGCTGACCTGAAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp TGTGCACGTGTCTCTGTGAGCACATTCACGGTGCATGCACCATTTTTGATGTCTCTAGAAGTTCCTTCTTaGACCAGTGCTGGCCAGGCA +
Preference number: 4 (lower is better)
Translates to: CARVSVSTFTVHAPFLMSLEVPS*TSAGQA
Trigger: TGCCTGGCCAGCACTGGTCCAAGAAGGAACTTCTAG...AGACATCAAAAATGGTGCATGCACCGTGAATGTGCTCACAGAGACACGTGCACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp ACTAAAGCGGTTTTAGAGAAATTGCAGGCAGCAACCCCACCCACTCCCTTTACCCAACTTCACTTCCTGTaGAGCTGGAAGATCTTCCCC +
Preference number: 4 (lower is better)
Translates to: TKAVLEKLQAATPPTPFTQLHFL*SWKIFP
Trigger: GGGGAAGATCTTCCAGCTCCACAGGAAGTGAAGTTG...GGTAAAGGGAGTGGGTGGGGTTGCTGCCTGCAATTTCTCTAAAACCGCTTTAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp TGGAATTCTGACGACTGGCCTCTGATATATACAGGACAATCCAAGCTTTGGTGGTTTGATTGCTTTGGCTaGGTGCATCTCCCCAGCCCC +
Preference number: 4 (lower is better)
Translates to: WNSDDWPLIYTGQSKLWWFDCFG*VHLPSP
Trigger: GGGGCTGGGGAGATGCACCCAGCCAAAGCAATCAAA...CCACCAAAGCTTGGATTGTCCTGTATATATCAGAGGCCAGTCGTCAGAATTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR CCA 90 bp CTCTCCACACTCGAGACTTGCAGATGCACGTGTGACGGTGCCATTCTTCGTATAGTCCTCCTCCCCAGTTaGAAGAGTTGTTGTTCTTGT +
Preference number: 4 (lower is better)
Translates to: LSTLETCRCTCDGAILRIVLLPS*KSCCSC
Trigger: ACAAGAACAACAACTCTTCCAACTGGGGAGGAGGAC...TATACGAAGAATGGCACCGTCACACGTGCATCTGCAAGTCTCGAGTGTGGAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR CCA 90 bp CCACACTCGAGACTTGCAGATGCACGTGTGACGGTGCCATTCTTCGTATATGTTACCCCTGATCCTTGCTaGGATTCTCATTCCAAGAGG +
Preference number: 4 (lower is better)
Translates to: PHSRLADARVTVPFFVYVTPDPC*DSHSKR
Trigger: CCTCTTGGAATGAGAATCCCAGCAAGGATCAGGGGT...AACATATACGAAGAATGGCACCGTCACACGTGCATCTGCAAGTCTCGAGTGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR CCA 90 bp AACTTTTACAGCCACCCCTCTGGGAGTTGTACACACCTTTCAGTAGCCGAAGGGCGTCTCATTCCATGCTaGGGATCTTTTGCAATCCTC +
Preference number: 4 (lower is better)
Translates to: NFYSHPSGSCTHLSVAEGRLIPC*GSFAIL
Trigger: GAGGATTGCAAAAGATCCCCAGCATGGAATGAGACG...CCCTTCGGCTACTGAAAGGTGTGTACAACTCCCAGAGGGGTGGCTGTAAAAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp TCTGAACCAAGAAAGGTTGAGAGCTCCAGGTATTGTGTGGAGAACATTCTGGAGGGTGCTGGGCCCCCTTaGGAATTCTTATCCCACAGA +
Preference number: 4 (lower is better)
Translates to: SEPRKVESSRYCVENILEGAGPP*EFLSHR
Trigger: TCTGTGGGATAAGAATTCCCAAGGGGGCCCAGCACC...CTCCAGAATGTTCTCCACACAATACCTGGAGCTCTCAACCTTTCTTGGTTCAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp TCTGACGACTGGCCTCTGATATATACAGGACAATCCAAGCTTTGGTGGAAAAGAAACCTTCCCAGTAGCTaGGACTACAGGCATGCGCCC +
Preference number: 4 (lower is better)
Translates to: SDDWPLIYTGQSKLWWKRNLPSS*DYRHAP
Trigger: GGGCGCATGCCTGTAGTCCCAGCTACTGGGAAGGTT...TCTTTTCCACCAAAGCTTGGATTGTCCTGTATATATCAGAGGCCAGTCGTCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR TCA 90 bp GGATTTTTGCTGTACCTTCCTGTTACCTGTTTGTGTGCAAAGTTGGAAAGCTGCCATTGTTGCCACCATTaGCTGGTGGCGATGGAGAGC +
Preference number: 4 (lower is better)
Translates to: GFLLYLPVTCLCAKLESCHCCHH*LVAMES
Trigger: GCTCTCCATCGCCACCAGTCAATGGTGGCAACAATG...GCAGCTTTCCAACTTTGCACACAAACAGGTAACAGGAAGGTACAGCAAAAATCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp TCTGACGACTGGCCTCTGATATATACAGGACAATCCAAGCTTTGGTGGAAAAGATTGTCCCCAGCTTGCTaGGTTGTGGGAGGAAGCACT +
Preference number: 4 (lower is better)
Translates to: SDDWPLIYTGQSKLWWKRLSPAC*VVGGST
Trigger: AGTGCTTCCTCCCACAACTCAGCAAGCTGGGGACAA...TCTTTTCCACCAAAGCTTGGATTGTCCTGTATATATCAGAGGCCAGTCGTCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR TCA 90 bp AACTTTTACAGCCACCCCTCTGGGAGTTGTACACACCTTTCAGTAGCCGAAGGGATCAGGGAACTTTGCTaGAGTGCTATGAACGTTGGT +
Preference number: 4 (lower is better)
Translates to: NFYSHPSGSCTHLSVAEGIRELC*SAMNVG
Trigger: ACCAACGTTCATAGCACTTCAGCAAAGTTCCCTGAT...CCCTTCGGCTACTGAAAGGTGTGTACAACTCCCAGAGGGGTGGCTGTAAAAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp TCCCTAATGACTAAAGCTGACCGTCTGTTTGTTTGTATCCAACGGATAGCTTCTGCTGCTCCAGGGAGATaGTGGTTTGGGGTTGGTCAG +
Preference number: 4 (lower is better)
Translates to: SLMTKADRLFVCIQRIASAAPGR*WFGVGQ
Trigger: CTGACCAACCCCAAACCATCATCTCCCTGGAGCAGC...AGAAGCTATCCGTTGGATACAAACAAACAGACGGTCAGCTTTAGTCATTAGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp GGGTTTATCTTAAAGATGGGGGCGAAGGGGGTGTCTGCAAAGAAGCAATTCAAAGTAACTAGGACGAACTaGGCCACCATCACTCCAGGT +
Preference number: 4 (lower is better)
Translates to: GFILKMGAKGVSAKKQFKVTRTN*ATITPG
Trigger: ACCTGGAGTGATGGTGGCTCAGTTCGTCCTAGTTAC...TTTGAATTGCTTCTTTGCAGACACCCCCTTCGCCCCCATCTTTAAGATAAACCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp TCTGAACCAAGAAAGGTTGAGAGCTCCAGGTATTGTGTGGAGAACATTCTGGAGGTGCCAGAAAGCGGCTaGCTTCATCATCAGTGGCAA +
Preference number: 4 (lower is better)
Translates to: SEPRKVESSRYCVENILEVPESG*LHHQWQ
Trigger: TTGCCACTGATGATGAAGTCAGCCGCTTTCTGGCAC...CTCCAGAATGTTCTCCACACAATACCTGGAGCTCTCAACCTTTCTTGGTTCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp CACACACATGTGCGTCCCCCTTGCTCAGGATGTCTGGGTGTATGTACGAAGGCACTAGGTTGGCGTTCATaGTTCAAGTATTTCAAGAGT +
Preference number: 4 (lower is better)
Translates to: HTHVRPPCSGCLGVCTKALGWRS*FKYFKS
Trigger: ACTCTTGAAATACTTGAATCATGAACGCCAACCTAG...TGCCTTCGTACATACACCCAGACATCCTGAGCAAGGGGGACGCACATGTGTGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp CACACACATGTGCGTCCCCCTTGCTCAGGATGTCTGGGTGTATGTACGAAGGCATTTTTGTTTTTAAAGTaGGGCTCCGTCAAGTCTTCC +
Preference number: 4 (lower is better)
Translates to: HTHVRPPCSGCLGVCTKAFLFLK*GSVKSS
Trigger: GGAAGACTTGACGGAGCCTCACTTTAAAAACAAAAA...TGCCTTCGTACATACACCCAGACATCCTGAGCAAGGGGGACGCACATGTGTGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp TGTGCACGTGTCTCTGTGAGCACATTCACGGTGCATGCACCATTTTTGATGTCTAAACGTTTCTGTCAGTaGTGGCCTGGTGCTGTAACG +
Preference number: 4 (lower is better)
Translates to: CARVSVSTFTVHAPFLMSKRFCQ*WPGAVT
Trigger: CGTTACAGCACCAGGCCATCACTGACAGAAACGTTT...AGACATCAAAAATGGTGCATGCACCGTGAATGTGCTCACAGAGACACGTGCACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp TCCCTAATGACTAAAGCTGACCGTCTGTTTGTTTGTATCCAACGGATAGCTTCTTGCAGATGCCAAGTGTaGCCACCTACCCACAGAGGG +
Preference number: 4 (lower is better)
Translates to: SLMTKADRLFVCIQRIASCRCQV*PPTHRG
Trigger: CCCTCTGTGGGTAGGTGGTCACACTTGGCATCTGCA...AGAAGCTATCCGTTGGATACAAACAAACAGACGGTCAGCTTTAGTCATTAGGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp GGATTTTTGCTGTACCTTCCTGTTACCTGTTTGTGTGCAAAGTTGGAAAGCTGCGAAGGGGCACGGTGGTaGTTCAAATTGCAGAGCAGG +
Preference number: 4 (lower is better)
Translates to: GFLLYLPVTCLCAKLESCEGARW*FKLQSR
Trigger: CCTGCTCTGCAATTTGAATCACCACCGTGCCCCTTC...GCAGCTTTCCAACTTTGCACACAAACAGGTAACAGGAAGGTACAGCAAAAATCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp TGTGCACGTGTCTCTGTGAGCACATTCACGGTGCATGCACCATTTTTGATGTCTCTTACATCTGTGGAGTaGCTGGACCACACACACACA +
Preference number: 4 (lower is better)
Translates to: CARVSVSTFTVHAPFLMSLTSVE*LDHTHT
Trigger: TGTGTGTGTGTGGTCCAGTCACTCCACAGATGTAAG...AGACATCAAAAATGGTGCATGCACCGTGAATGTGCTCACAGAGACACGTGCACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp ACTAAAGCGGTTTTAGAGAAATTGCAGGCAGCAACCCCACCCACTCCCTTTACCGATACTGGATCTAATTaGCAGCAGAGGTCCTCTGTC +
Preference number: 4 (lower is better)
Translates to: TKAVLEKLQAATPPTPFTDTGSN*QQRSSV
Trigger: GACAGAGGACCTCTGCTGTCAATTAGATCCAGTATC...GGTAAAGGGAGTGGGTGGGGTTGCTGCCTGCAATTTCTCTAAAACCGCTTTAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp AATGAAGCTGAAGGAATCGAGTGGGAGGGACTGTTCTCCTCTTTGGGGGAGCTCTATGAATGTTGTAAATaGAACACGTCCAGGGTTGGG +
Preference number: 4 (lower is better)
Translates to: NEAEGIEWEGLFSSLGELYECCK*NTSRVG
Trigger: CCCAACCCTGGACGTGTTTCATTTACAACATTCATA...GAGCTCCCCCAAAGAGGAGAACAGTCCCTCCCACTCGATTCCTTCAGCTTCATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp CCCCTGTCTCCTCTCCCAAGTCCCAGAATCTCTTCCACTCAACTCTACACTGTGTATGAATGTTGTAAATaGAACACGTCCAGGGTTGGG +
Preference number: 4 (lower is better)
Translates to: PLSPLPSPRISSTQLYTVYECCK*NTSRVG
Trigger: CCCAACCCTGGACGTGTTTCATTTACAACATTCATA...CACAGTGTAGAGTTGAGTGGAAGAGATTCTGGGACTTGGGAGAGGAGACAGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp CCCCTGTCTCCTCTCCCAAGTCCCAGAATCTCTTCCACTCAACTCTACACTGTGAACGACCATGAGGTCTaGAGACTGACAATTCATTGT +
Preference number: 4 (lower is better)
Translates to: PLSPLPSPRISSTQLYTVNDHEV*RLTIHC
Trigger: ACAATGAATTGTCAGTCTTCAGACCTCATGGTCGTT...CACAGTGTAGAGTTGAGTGGAAGAGATTCTGGGACTTGGGAGAGGAGACAGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp AATGAAGCTGAAGGAATCGAGTGGGAGGGACTGTTCTCCTCTTTGGGGGAGCTCTATCTGTGTGTTTCTTaGCTGTATGGACTCCCTGTA +
Preference number: 4 (lower is better)
Translates to: NEAEGIEWEGLFSSLGELYLCVS*LYGLPV
Trigger: TACAGGGAGTCCATACAGTCAAGAAACACACAGATA...GAGCTCCCCCAAAGAGGAGAACAGTCCCTCCCACTCGATTCCTTCAGCTTCATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp CAAAGGGTAAAAGCGTGCTGCCCGCTCTGCACACGGCAGAAGCTGGAAAATGCCGTTATGACAAGAGACTaGCAGCTTAAAAACTACTCA +
Preference number: 4 (lower is better)
Translates to: QRVKACCPLCTRQKLENAVMTRD*QLKNYS
Trigger: TGAGTAGTTTTTAAGCTGTCAGTCTCTTGTCATAAC...GGCATTTTCCAGCTTCTGCCGTGTGCAGAGCGGGCAGCACGCTTTTACCCTTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp CCCCTGTCTCCTCTCCCAAGTCCCAGAATCTCTTCCACTCAACTCTACACTGTGGTCACAGTGAAGAACTaGAGACTGAGCTTTTTGCAA +
Preference number: 4 (lower is better)
Translates to: PLSPLPSPRISSTQLYTVVTVKN*RLSFLQ
Trigger: TTGCAAAAAGCTCAGTCTTCAGTTCTTCACTGTGAC...CACAGTGTAGAGTTGAGTGGAAGAGATTCTGGGACTTGGGAGAGGAGACAGGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp AATGAAGCTGAAGGAATCGAGTGGGAGGGACTGTTCTCCTCTTTGGGGGAGCTCACCATCCCAACTTGTTaGTATTGGCTAGATATGGGT +
Preference number: 4 (lower is better)
Translates to: NEAEGIEWEGLFSSLGELTIPTC*YWLDMG
Trigger: ACCCATATCTAGCCAATATCAACAAGTTGGGATGGT...GAGCTCCCCCAAAGAGGAGAACAGTCCCTCCCACTCGATTCCTTCAGCTTCATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp CACACACATGTGCGTCCCCCTTGCTCAGGATGTCTGGGTGTATGTACGAAGGCACTCGTTACAGTACTGTaGACGTCAACAAGAAGAATT +
Preference number: 4 (lower is better)
Translates to: HTHVRPPCSGCLGVCTKALVTVL*TSTRRI
Trigger: AATTCTTCTTGTTGACGTTCACAGTACTGTAACGAG...TGCCTTCGTACATACACCCAGACATCCTGAGCAAGGGGGACGCACATGTGTGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp TGTGCACGTGTCTCTGTGAGCACATTCACGGTGCATGCACCATTTTTGATGTCTGGCACGAGGAGACTGTaGTCAAGTCTGTTACTCGTT +
Preference number: 4 (lower is better)
Translates to: CARVSVSTFTVHAPFLMSGTRRL*SSLLLV
Trigger: AACGAGTAACAGACTTGATCACAGTCTCCTCGTGCC...AGACATCAAAAATGGTGCATGCACCGTGAATGTGCTCACAGAGACACGTGCACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp AATGAAGCTGAAGGAATCGAGTGGGAGGGACTGTTCTCCTCTTTGGGGGAGCTCAAAAGGATAATCCACTaGTGTCAGAAAGGAGAGAGG +
Preference number: 4 (lower is better)
Translates to: NEAEGIEWEGLFSSLGELKRIIH*CQKGER
Trigger: CCTCTCTCCTTTCTGACATCAGTGGATTATCCTTTT...GAGCTCCCCCAAAGAGGAGAACAGTCCCTCCCACTCGATTCCTTCAGCTTCATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp ACTTTCAGGTCAGCACGAGTGAAGCGTGGTTTCCTGAGCTTGAAGGGCTCTGAAAGGAGTGGGAACAGTTaGGCTGTTGTATCTGCTTTT +
Preference number: 4 (lower is better)
Translates to: TFRSARVKRGFLSLKGSERSGNS*AVVSAF
Trigger: AAAAGCAGATACAACAGCTCAACTGTTCCCACTCCT...TTCAGAGCCCTTCAAGCTCAGGAAACCACGCTTCACTCGTGCTGACCTGAAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp AATGAAGCTGAAGGAATCGAGTGGGAGGGACTGTTCTCCTCTTTGGGGGAGCTCGGAGGGCATAGAATGTaGAGTTATAAGCACATAGTG +
Preference number: 4 (lower is better)
Translates to: NEAEGIEWEGLFSSLGELGGHRM*SYKHIV
Trigger: CACTATGTGCTTATAACTTCACATTCTATGCCCTCC...GAGCTCCCCCAAAGAGGAGAACAGTCCCTCCCACTCGATTCCTTCAGCTTCATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp AACTTTTACAGCCACCCCTCTGGGAGTTGTACACACCTTTCAGTAGCCGAAGGGAATCCAGCCTCTTTTTaGTGCCCTTTTCTGCACCTT +
Preference number: 4 (lower is better)
Translates to: NFYSHPSGSCTHLSVAEGNPASF*CPFLHL
Trigger: AAGGTGCAGAAAAGGGCATCAAAAAGAGGCTGGATT...CCCTTCGGCTACTGAAAGGTGTGTACAACTCCCAGAGGGGTGGCTGTAAAAGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp CCCCTGTCTCCTCTCCCAAGTCCCAGAATCTCTTCCACTCAACTCTACACTGTGGTAGAGTTGGAAGATTaGACAGATTTAGCCTTAGGG +
Preference number: 4 (lower is better)
Translates to: PLSPLPSPRISSTQLYTVVELED*TDLALG
Trigger: CCCTAAGGCTAAATCTGTTCAATCTTCCAACTCTAC...CACAGTGTAGAGTTGAGTGGAAGAGATTCTGGGACTTGGGAGAGGAGACAGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp TCTGGTGCATCTTTAATTCAGCAGCTGCCAGAATACTCACGGGTGCATCTTCATATCTCCAGTGCTTTGTaGAGGGGCATCAGTGCTCCT +
Preference number: 4 (lower is better)
Translates to: SGASLIQQLPEYSRVHLHISSAL*RGISAP
Trigger: AGGAGCACTGATGCCCCTTCACAAAGCACTGGAGAT...ATGAAGATGCACCCGTGAGTATTCTGGCAGCTGCTGAATTAAAGATGCACCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR TCA 90 bp GGGTTTATCTTAAAGATGGGGGCGAAGGGGGTGTCTGCAAAGAAGCAATTCAAACGACGGCCAGAGTTATaGCTGTCACTACTTCCTGCT +
Preference number: 4 (lower is better)
Translates to: GFILKMGAKGVSAKKQFKRRPEL*LSLLPA
Trigger: AGCAGGAAGTAGTGACAGTCATAACTCTGGCCGTCG...TTTGAATTGCTTCTTTGCAGACACCCCCTTCGCCCCCATCTTTAAGATAAACCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp TCTGGTGCATCTTTAATTCAGCAGCTGCCAGAATACTCACGGGTGCATCTTCATGTGTCCTGCTTAATTTaGGTTTGGCCCCAGCCAGTG +
Preference number: 4 (lower is better)
Translates to: SGASLIQQLPEYSRVHLHVSCLI*VWPQPV
Trigger: CACTGGCTGGGGCCAAACTCAAATTAAGCAGGACAC...ATGAAGATGCACCCGTGAGTATTCTGGCAGCTGCTGAATTAAAGATGCACCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR TCA 90 bp TTAAGGGTTTACATTGCAGGGGGAAATGTACCTCGAGGTATTATTTTGTGTGAGATCTCCCCAGCCCCCTaGGTTCTTGGTCTGTGTGGC +
Preference number: 4 (lower is better)
Translates to: LRVYIAGGNVPRGIILCEISPAP*VLGLCG
Trigger: GCCACACAGACCAAGAACTCAGGGGGCTGGGGAGAT...CTCACACAAAATAATACCTCGAGGTACATTTCCCCCTGCAATGTAAACCCTTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp ACTAAAGCGGTTTTAGAGAAATTGCAGGCAGCAACCCCACCCACTCCCTTTACCCATTTTCCGACTAATTaGCTGTGGGGATGGCTCTTC +
Preference number: 4 (lower is better)
Translates to: TKAVLEKLQAATPPTPFTHFPTN*LWGWLF
Trigger: GAAGAGCCATCCCCACAGTCAATTAGTCGGAAAATG...GGTAAAGGGAGTGGGTGGGGTTGCTGCCTGCAATTTCTCTAAAACCGCTTTAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp GGATTTTTGCTGTACCTTCCTGTTACCTGTTTGTGTGCAAAGTTGGAAAGCTGCCGATTGCTCCAAGGCTaGCGTTGGGTAGTGTGGAAC +
Preference number: 4 (lower is better)
Translates to: GFLLYLPVTCLCAKLESCRLLQG*RWVVWN
Trigger: GTTCCACACTACCCAACGTCAGCCTTGGAGCAATCG...GCAGCTTTCCAACTTTGCACACAAACAGGTAACAGGAAGGTACAGCAAAAATCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000454349.7
CDS-3UTR GCA 90 bp TCCCTAATGACTAAAGCTGACCGTCTGTTTGTTTGTATCCAACGGATAGCTTCTGGCTGCACGGGTGTGTaGAGACCTCTCGATTGTGCT +
Preference number: 4 (lower is better)
Translates to: SLMTKADRLFVCIQRIASGCTGV*RPLDCA
Trigger: AGCACAATCGAGAGGTCTGCACACACCCGTGCAGCC...AGAAGCTATCCGTTGGATACAAACAAACAGACGGTCAGCTTTAGTCATTAGGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp TTAAGGGTTTACATTGCAGGGGGAAATGTACCTCGAGGTATTATTTTGTGTGAGAACTGGGGAGGCACTTaGGCCCGGAGACTGGGAGAA +
Preference number: 4 (lower is better)
Translates to: LRVYIAGGNVPRGIILCENWGGT*ARRLGE
Trigger: TTCTCCCAGTCTCCGGGCGCAAGTGCCTCCCCAGTT...CTCACACAAAATAATACCTCGAGGTACATTTCCCCCTGCAATGTAAACCCTTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp AACTTTTACAGCCACCCCTCTGGGAGTTGTACACACCTTTCAGTAGCCGAAGGGCAAGAGAAGCTGACATaGCAACTGAAACTGGGGAAT +
Preference number: 4 (lower is better)
Translates to: NFYSHPSGSCTHLSVAEGQEKLT*QLKLGN
Trigger: ATTCCCCAGTTTCAGTTGGCATGTCAGCTTCTCTTG...CCCTTCGGCTACTGAAAGGTGTGTACAACTCCCAGAGGGGTGGCTGTAAAAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp TCTGAACCAAGAAAGGTTGAGAGCTCCAGGTATTGTGTGGAGAACATTCTGGAGATTCGAGCCAGCTGCTaGTCTTGCTGTTGGCGTACA +
Preference number: 4 (lower is better)
Translates to: SEPRKVESSRYCVENILEIRASC*SCCWRT
Trigger: TGTACGCCAACAGCAAGAGCAGCAGCTGGCTCGAAT...CTCCAGAATGTTCTCCACACAATACCTGGAGCTCTCAACCTTTCTTGGTTCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp GGATTTTTGCTGTACCTTCCTGTTACCTGTTTGTGTGCAAAGTTGGAAAGCTGCTGCTGCTGCTGCTGCTaGTGCAGTGCACTCACCATT +
Preference number: 4 (lower is better)
Translates to: GFLLYLPVTCLCAKLESCCCCCC*CSALTI
Trigger: AATGGTGAGTGCACTGCAGCAGCAGCAGCAGCAGCA...GCAGCTTTCCAACTTTGCACACAAACAGGTAACAGGAAGGTACAGCAAAAATCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp TTAAGGGTTTACATTGCAGGGGGAAATGTACCTCGAGGTATTATTTTGTGTGAGAGGGCGAGTGCTTCATaGCTGGCTGCCTCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: LRVYIAGGNVPRGIILCERASAS*LAASAA
Trigger: AGCAGCAGAGGCAGCCAGGCATGAAGCACTCGCCCT...CTCACACAAAATAATACCTCGAGGTACATTTCCCCCTGCAATGTAAACCCTTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp TGTGCACGTGTCTCTGTGAGCACATTCACGGTGCATGCACCATTTTTGATGTCTGAGCCCCACATTCAATaGGTTGGGTACCATGTTGTC +
Preference number: 4 (lower is better)
Translates to: CARVSVSTFTVHAPFLMSEPHIQ*VGYHVV
Trigger: GACAACATGGTACCCAACGCATTGAATGTGGGGCTC...AGACATCAAAAATGGTGCATGCACCGTGAATGTGCTCACAGAGACACGTGCACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp TCCCTAATGACTAAAGCTGACCGTCTGTTTGTTTGTATCCAACGGATAGCTTCTCCTTCCCACCAACCATaGCATAGTCCATGCCGCCAG +
Preference number: 4 (lower is better)
Translates to: SLMTKADRLFVCIQRIASPSHQP*HSPCRQ
Trigger: CTGGCGGCATGGACTATGGCATGGTTGGTGGGAAGG...AGAAGCTATCCGTTGGATACAAACAAACAGACGGTCAGCTTTAGTCATTAGGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp AATGAAGCTGAAGGAATCGAGTGGGAGGGACTGTTCTCCTCTTTGGGGGAGCTCATAGCGCCATTTTTGTaGATATTGGCTTCCTGTGTG +
Preference number: 4 (lower is better)
Translates to: NEAEGIEWEGLFSSLGELIAPFL*ILASCV
Trigger: CACACAGGAAGCCAATATGCACAAAAATGGCGCTAT...GAGCTCCCCCAAAGAGGAGAACAGTCCCTCCCACTCGATTCCTTCAGCTTCATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp GCAGCTGCCAGAATACTCACGGGTGCATCTTCATGCATGTTTGTCTACGTGGGTGAGGCCAACTGGCATTaGTGGATTTACTTCCGATTT +
Preference number: 4 (lower is better)
Translates to: AAARILTGASSCMFVYVGEANWH*WIYFRF
Trigger: AAATCGGAAGTAAATCCAGCAATGCCAGTTGGCCTC...ACCCACGTAGACAAACATGCATGAAGATGCACCCGTGAGTATTCTGGCAGCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR GCA 90 bp TCCCTAATGACTAAAGCTGACCGTCTGTTTGTTTGTATCCAACGGATAGCTTCTCCGCCTCCTGTTTGGTaGTGTATCGGATCAGGGCAG +
Preference number: 4 (lower is better)
Translates to: SLMTKADRLFVCIQRIASPPPVW*CIGSGQ
Trigger: CTGCCCTGATCCGATACAGCACCAAACAGGAGGCGG...AGAAGCTATCCGTTGGATACAAACAAACAGACGGTCAGCTTTAGTCATTAGGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp AACTTTTACAGCCACCCCTCTGGGAGTTGTACACACCTTTCAGTAGCCGAAGGGACAGATACTCAGATGTaGCTGGTGGCCATTCACTTA +
Preference number: 4 (lower is better)
Translates to: NFYSHPSGSCTHLSVAEGTDTQM*LVAIHL
Trigger: TAAGTGAATGGCCACCAGGCACATCTGAGTATCTGT...CCCTTCGGCTACTGAAAGGTGTGTACAACTCCCAGAGGGGTGGCTGTAAAAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp AATGAAGCTGAAGGAATCGAGTGGGAGGGACTGTTCTCCTCTTTGGGGGAGCTCATGCTTTCAGGAGGCTaGTCACCACTTATTCTTTTC +
Preference number: 4 (lower is better)
Translates to: NEAEGIEWEGLFSSLGELMLSGG*SPLILF
Trigger: GAAAAGAATAAGTGGTGAGCAGCCTCCTGAAAGCAT...GAGCTCCCCCAAAGAGGAGAACAGTCCCTCCCACTCGATTCCTTCAGCTTCATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp TCTGAACCAAGAAAGGTTGAGAGCTCCAGGTATTGTGTGGAGAACATTCTGGAGAGGACAGTAGAGGTCTaGTCCCACCAAGGGTTGGAA +
Preference number: 4 (lower is better)
Translates to: SEPRKVESSRYCVENILERTVEV*SHQGLE
Trigger: TTCCAACCCTTGGTGGGAGCAGACCTCTACTGTCCT...CTCCAGAATGTTCTCCACACAATACCTGGAGCTCTCAACCTTTCTTGGTTCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp CCCCTGTCTCCTCTCCCAAGTCCCAGAATCTCTTCCACTCAACTCTACACTGTGCACTCACTTGAGTCATaGCTGTCAATCTCTTTTGAG +
Preference number: 4 (lower is better)
Translates to: PLSPLPSPRISSTQLYTVHSLES*LSISFE
Trigger: CTCAAAAGAGATTGACAGGCATGACTCAAGTGAGTG...CACAGTGTAGAGTTGAGTGGAAGAGATTCTGGGACTTGGGAGAGGAGACAGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp GGATTTTTGCTGTACCTTCCTGTTACCTGTTTGTGTGCAAAGTTGGAAAGCTGCCATGTGCGTCCCCCTTaGTCAGGATGTCTGGGTGTA +
Preference number: 4 (lower is better)
Translates to: GFLLYLPVTCLCAKLESCHVRPP*SGCLGV
Trigger: TACACCCAGACATCCTGAGCAAGGGGGACGCACATG...GCAGCTTTCCAACTTTGCACACAAACAGGTAACAGGAAGGTACAGCAAAAATCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp GGGTTTATCTTAAAGATGGGGGCGAAGGGGGTGTCTGCAAAGAAGCAATTCAAAACACACACACACATGTaGGTCCCCCTTGCTCAGGAT +
Preference number: 4 (lower is better)
Translates to: GFILKMGAKGVSAKKQFKTHTHM*VPLAQD
Trigger: ATCCTGAGCAAGGGGGACGCACATGTGTGTGTGTGT...TTTGAATTGCTTCTTTGCAGACACCCCCTTCGCCCCCATCTTTAAGATAAACCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp CCCCTGTCTCCTCTCCCAAGTCCCAGAATCTCTTCCACTCAACTCTACACTGTGAGTAGACATGGCTCTTaGCAAAGAATACCACGGAAA +
Preference number: 4 (lower is better)
Translates to: PLSPLPSPRISSTQLYTVSRHGS*QRIPRK
Trigger: TTTCCGTGGTATTCTTTGGCAAGAGCCATGTCTACT...CACAGTGTAGAGTTGAGTGGAAGAGATTCTGGGACTTGGGAGAGGAGACAGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp ACTTTCAGGTCAGCACGAGTGAAGCGTGGTTTCCTGAGCTTGAAGGGCTCTGAAAAGGCCACTCCACTTTaGCTCCAGTCAACTTTTACA +
Preference number: 4 (lower is better)
Translates to: TFRSARVKRGFLSLKGSEKATPL*LQSTFT
Trigger: TGTAAAAGTTGACTGGAGGCAAAGTGGAGTGGCCTT...TTCAGAGCCCTTCAAGCTCAGGAAACCACGCTTCACTCGTGCTGACCTGAAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp TTAAGGGTTTACATTGCAGGGGGAAATGTACCTCGAGGTATTATTTTGTGTGAGGGACTAACGTGGGTCTaGGTCGCCTGGGTACCTTCC +
Preference number: 4 (lower is better)
Translates to: LRVYIAGGNVPRGIILCEGLTWV*VAWVPS
Trigger: GGAAGGTACCCAGGCGACGCAGACCCACGTTAGTCC...CTCACACAAAATAATACCTCGAGGTACATTTCCCCCTGCAATGTAAACCCTTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp CACACACATGTGCGTCCCCCTTGCTCAGGATGTCTGGGTGTATGTACGAAGGCAGCAGAAGCTGGAAAATaGCTTGTTTACATGCATGAA +
Preference number: 4 (lower is better)
Translates to: HTHVRPPCSGCLGVCTKAAEAGK*LVYMHE
Trigger: TTCATGCATGTAAACAAGGCATTTTCCAGCTTCTGC...TGCCTTCGTACATACACCCAGACATCCTGAGCAAGGGGGACGCACATGTGTGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp TGTGCACGTGTCTCTGTGAGCACATTCACGGTGCATGCACCATTTTTGATGTCTACTGAAGAACAAGGATaGAACGCTACTCCCTTCCCC +
Preference number: 4 (lower is better)
Translates to: CARVSVSTFTVHAPFLMSTEEQG*NATPFP
Trigger: GGGGAAGGGAGTAGCGTTGCATCCTTGTTCTTCAGT...AGACATCAAAAATGGTGCATGCACCGTGAATGTGCTCACAGAGACACGTGCACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp ACTAAAGCGGTTTTAGAGAAATTGCAGGCAGCAACCCCACCCACTCCCTTTACCGTGGAGTTCCATTGCTaGACTGGATTAACACTGCAC +
Preference number: 4 (lower is better)
Translates to: TKAVLEKLQAATPPTPFTVEFHC*TGLTLH
Trigger: GTGCAGTGTTAATCCAGTGCAGCAATGGAACTCCAC...GGTAAAGGGAGTGGGTGGGGTTGCTGCCTGCAATTTCTCTAAAACCGCTTTAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp TGTGCACGTGTCTCTGTGAGCACATTCACGGTGCATGCACCATTTTTGATGTCTATACAGCCTGCCAAATaGAAGGGAAGCAGAGAGAGG +
Preference number: 4 (lower is better)
Translates to: CARVSVSTFTVHAPFLMSIQPAK*KGSRER
Trigger: CCTCTCTCTGCTTCCCTTGCATTTGGCAGGCTGTAT...AGACATCAAAAATGGTGCATGCACCGTGAATGTGCTCACAGAGACACGTGCACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp ACTAAAGCGGTTTTAGAGAAATTGCAGGCAGCAACCCCACCCACTCCCTTTACCAAAGAAGAGGCTGCATaGAGACCTCCCCTGTCAAAA +
Preference number: 4 (lower is better)
Translates to: TKAVLEKLQAATPPTPFTKEEAA*RPPLSK
Trigger: TTTTGACAGGGGAGGTCTGCATGCAGCCTCTTCTTT...GGTAAAGGGAGTGGGTGGGGTTGCTGCCTGCAATTTCTCTAAAACCGCTTTAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp TTAAGGGTTTACATTGCAGGGGGAAATGTACCTCGAGGTATTATTTTGTGTGAGATGCCTGTGCAGCCCTaGACAGGCACGAGGAGACTG +
Preference number: 4 (lower is better)
Translates to: LRVYIAGGNVPRGIILCEMPVQP*TGTRRL
Trigger: CAGTCTCCTCGTGCCTGTGCAGGGCTGCACAGGCAT...CTCACACAAAATAATACCTCGAGGTACATTTCCCCCTGCAATGTAAACCCTTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp TCTGAACCAAGAAAGGTTGAGAGCTCCAGGTATTGTGTGGAGAACATTCTGGAGATAAGATCATGCCTGTaGAGCCCTGCACAGGCACGA +
Preference number: 4 (lower is better)
Translates to: SEPRKVESSRYCVENILEIRSCL*SPAQAR
Trigger: TCGTGCCTGTGCAGGGCTGCACAGGCATGATCTTAT...CTCCAGAATGTTCTCCACACAATACCTGGAGCTCTCAACCTTTCTTGGTTCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp GGGTTTATCTTAAAGATGGGGGCGAAGGGGGTGTCTGCAAAGAAGCAATTCAAAATAAGATCATGCCTGTaGAGCCCTGCACAGGCACGA +
Preference number: 4 (lower is better)
Translates to: GFILKMGAKGVSAKKQFKIRSCL*SPAQAR
Trigger: TCGTGCCTGTGCAGGGCTGCACAGGCATGATCTTAT...TTTGAATTGCTTCTTTGCAGACACCCCCTTCGCCCCCATCTTTAAGATAAACCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp TCTGAACCAAGAAAGGTTGAGAGCTCCAGGTATTGTGTGGAGAACATTCTGGAGACCCTGATAAGATCATaGCTGTGCAGCCCTGCACAG +
Preference number: 4 (lower is better)
Translates to: SEPRKVESSRYCVENILETLIRS*LCSPAQ
Trigger: CTGTGCAGGGCTGCACAGGCATGATCTTATCAGGGT...CTCCAGAATGTTCTCCACACAATACCTGGAGCTCTCAACCTTTCTTGGTTCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp TTAAGGGTTTACATTGCAGGGGGAAATGTACCTCGAGGTATTATTTTGTGTGAGCCCCTCCAACACAAATaGAAACCGGCTCCCCCGACC +
Preference number: 4 (lower is better)
Translates to: LRVYIAGGNVPRGIILCEPLQHK*KPAPPT
Trigger: GGTCGGGGGAGCCGGTTTGCATTTGTGTTGGAGGGG...CTCACACAAAATAATACCTCGAGGTACATTTCCCCCTGCAATGTAAACCCTTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp GGATTTTTGCTGTACCTTCCTGTTACCTGTTTGTGTGCAAAGTTGGAAAGCTGCACATTCTGGAGTCCCTaGAGGGGATGGATCTGCTGG +
Preference number: 4 (lower is better)
Translates to: GFLLYLPVTCLCAKLESCTFWSP*RGWICW
Trigger: CCAGCAGATCCATCCCCTGCAGGGACTCCAGAATGT...GCAGCTTTCCAACTTTGCACACAAACAGGTAACAGGAAGGTACAGCAAAAATCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp TCTGAACCAAGAAAGGTTGAGAGCTCCAGGTATTGTGTGGAGAACATTCTGGAGGGGTGCAGAATCTTGTaGACGTGTCTCTGTGAGCAC +
Preference number: 4 (lower is better)
Translates to: SEPRKVESSRYCVENILEGCRIL*TCLCEH
Trigger: GTGCTCACAGAGACACGTGCACAAGATTCTGCACCC...CTCCAGAATGTTCTCCACACAATACCTGGAGCTCTCAACCTTTCTTGGTTCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp GGGTTTATCTTAAAGATGGGGGCGAAGGGGGTGTCTGCAAAGAAGCAATTCAAAGGGTGCAGAATCTTGTaGACGTGTCTCTGTGAGCAC +
Preference number: 4 (lower is better)
Translates to: GFILKMGAKGVSAKKQFKGCRIL*TCLCEH
Trigger: GTGCTCACAGAGACACGTGCACAAGATTCTGCACCC...TTTGAATTGCTTCTTTGCAGACACCCCCTTCGCCCCCATCTTTAAGATAAACCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp CCCCTGTCTCCTCTCCCAAGTCCCAGAATCTCTTCCACTCAACTCTACACTGTGTGTTACCTGTTTGTGTaGAAAGTTGGAAAGCTGCCT +
Preference number: 4 (lower is better)
Translates to: PLSPLPSPRISSTQLYTVCYLFV*KVGKLP
Trigger: AGGCAGCTTTCCAACTTTGCACACAAACAGGTAACA...CACAGTGTAGAGTTGAGTGGAAGAGATTCTGGGACTTGGGAGAGGAGACAGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp ACTTTCAGGTCAGCACGAGTGAAGCGTGGTTTCCTGAGCTTGAAGGGCTCTGAAAGTGCACCTCTAAAGTaGCTAGTTTCTGTGTCCATG +
Preference number: 4 (lower is better)
Translates to: TFRSARVKRGFLSLKGSESAPLK*LVSVSM
Trigger: CATGGACACAGAAACTAGGCACTTTAGAGGTGCACT...TTCAGAGCCCTTCAAGCTCAGGAAACCACGCTTCACTCGTGCTGACCTGAAAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp TGTGCACGTGTCTCTGTGAGCACATTCACGGTGCATGCACCATTTTTGATGTCTAGCCTGCCATGCAAGTaGACCTCTAAAGTGCCTAGT +
Preference number: 4 (lower is better)
Translates to: CARVSVSTFTVHAPFLMSSLPCK*TSKVPS
Trigger: ACTAGGCACTTTAGAGGTGCACTTGCATGGCAGGCT...AGACATCAAAAATGGTGCATGCACCGTGAATGTGCTCACAGAGACACGTGCACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp TCCCTAATGACTAAAGCTGACCGTCTGTTTGTTTGTATCCAACGGATAGCTTCTAAAGGGGGCCCAGCCTaGCATGCAAGTGCACCTCTA +
Preference number: 4 (lower is better)
Translates to: SLMTKADRLFVCIQRIASKGGPA*HASAPL
Trigger: TAGAGGTGCACTTGCATGGCAGGCTGGGCCCCCTTT...AGAAGCTATCCGTTGGATACAAACAAACAGACGGTCAGCTTTAGTCATTAGGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp CCTCCACACTCTCCACACTCGAGACTTGCAGATGCACGTGTGACGGTGCCATTCTACTGTGCTAACCTGTaGACTGGAATTACTATTATC +
Preference number: 4 (lower is better)
Translates to: PPHSPHSRLADARVTVPFYCANL*TGITII
Trigger: GATAATAGTAATTCCAGTGCACAGGTTAGCACAGTA...GAATGGCACCGTCACACGTGCATCTGCAAGTCTCGAGTGTGGAGAGTGTGGAGG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR GCA 90 bp ACTTTCAGGTCAGCACGAGTGAAGCGTGGTTTCCTGAGCTTGAAGGGCTCTGAAACTGTCACTACTTCCTaGTTTGTGGTTGCTTCCAGT +
Preference number: 4 (lower is better)
Translates to: TFRSARVKRGFLSLKGSETVTTS*FVVASS
Trigger: ACTGGAAGCAACCACAAAGCAGGAAGTAGTGACAGT...TTCAGAGCCCTTCAAGCTCAGGAAACCACGCTTCACTCGTGCTGACCTGAAAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp TCTGAACCAAGAAAGGTTGAGAGCTCCAGGTATTGTGTGGAGAACATTCTGGAGCCCACCCCTGATCCTTaGTGGGATTCTCATTCCAAG +
Preference number: 4 (lower is better)
Translates to: SEPRKVESSRYCVENILEPTPDP*WDSHSK
Trigger: CTTGGAATGAGAATCCCAGCAAGGATCAGGGGTGGG...CTCCAGAATGTTCTCCACACAATACCTGGAGCTCTCAACCTTTCTTGGTTCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp CACACACATGTGCGTCCCCCTTGCTCAGGATGTCTGGGTGTATGTACGAAGGCAAGACACAGGTTTACTTaGAGAACTTTCCCAATTGCT +
Preference number: 4 (lower is better)
Translates to: HTHVRPPCSGCLGVCTKARHRFT*RTFPIA
Trigger: AGCAATTGGGAAAGTTCTGCAAGTAAACCTGTGTCT...TGCCTTCGTACATACACCCAGACATCCTGAGCAAGGGGGACGCACATGTGTGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp TTAAGGGTTTACATTGCAGGGGGAAATGTACCTCGAGGTATTATTTTGTGTGAGCAGGCTGTGGCCCGCTaGTCCAGCTGGAATTGGAAG +
Preference number: 4 (lower is better)
Translates to: LRVYIAGGNVPRGIILCEQAVAR*SSWNWK
Trigger: CTTCCAATTCCAGCTGGAGCAGCGGGCCACAGCCTG...CTCACACAAAATAATACCTCGAGGTACATTTCCCCCTGCAATGTAAACCCTTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp AATTCAGCAGCTGCCAGAATACTCACGGGTGCATCTTCATGCATGTTTGTCTACCTCGAGACTTGCAGATaGACGTGTGACGGTGCCATT +
Preference number: 4 (lower is better)
Translates to: NSAAARILTGASSCMFVYLETCR*TCDGAI
Trigger: AATGGCACCGTCACACGTGCATCTGCAAGTCTCGAG...GTAGACAAACATGCATGAAGATGCACCCGTGAGTATTCTGGCAGCTGCTGAATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR CCA 90 bp TTAAGGGTTTACATTGCAGGGGGAAATGTACCTCGAGGTATTATTTTGTGTGAGACTTTGTGGTCCTGCTaGCAACGGAATCGCGGCGGC +
Preference number: 4 (lower is better)
Translates to: LRVYIAGGNVPRGIILCETLWSC*QRNRGG
Trigger: GCCGCCGCGATTCCGTTGCCAGCAGGACCACAAAGT...CTCACACAAAATAATACCTCGAGGTACATTTCCCCCTGCAATGTAAACCCTTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp ACTAAAGCGGTTTTAGAGAAATTGCAGGCAGCAACCCCACCCACTCCCTTTACCATTATCTGGAGCAGGTaGTGTGCTTTTGCTCCAGAC +
Preference number: 4 (lower is better)
Translates to: TKAVLEKLQAATPPTPFTIIWSR*CAFAPD
Trigger: GTCTGGAGCAAAAGCACACCACCTGCTCCAGATAAT...GGTAAAGGGAGTGGGTGGGGTTGCTGCCTGCAATTTCTCTAAAACCGCTTTAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000301923.13
ENST00000454349.7
CDS-3UTR CCA 90 bp CTCTCCACACTCGAGACTTGCAGATGCACGTGTGACGGTGCCATTCTTCGTATAAAGGCCCACTATCTGTaGTTCCCATGTCTTTGGAAT +
Preference number: 4 (lower is better)
Translates to: LSTLETCRCTCDGAILRIKAHYL*FPCLWN
Trigger: ATTCCAAAGACATGGGAACCACAGATAGTGGGCCTT...TATACGAAGAATGGCACCGTCACACGTGCATCTGCAAGTCTCGAGTGTGGAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR CCA 90 bp TCTGGTGCATCTTTAATTCAGCAGCTGCCAGAATACTCACGGGTGCATCTTCATCTTGCGCCCGGAGACTaGGAGAAGAATTTAGTGGCT +
Preference number: 4 (lower is better)
Translates to: SGASLIQQLPEYSRVHLHLAPGD*EKNLVA
Trigger: AGCCACTAAATTCTTCTCCCAGTCTCCGGGCGCAAG...ATGAAGATGCACCCGTGAGTATTCTGGCAGCTGCTGAATTAAAGATGCACCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR CCA 90 bp AACTTTTACAGCCACCCCTCTGGGAGTTGTACACACCTTTCAGTAGCCGAAGGGCCACATTCAATGCGTTaGGTACCATGTTGTCCAGAT +
Preference number: 4 (lower is better)
Translates to: NFYSHPSGSCTHLSVAEGPHSMR*VPCCPD
Trigger: ATCTGGACAACATGGTACCCAACGCATTGAATGTGG...CCCTTCGGCTACTGAAAGGTGTGTACAACTCCCAGAGGGGTGGCTGTAAAAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp ACTAAAGCGGTTTTAGAGAAATTGCAGGCAGCAACCCCACCCACTCCCTTTACCTTTGGTTTGAAGGTCTaGGAGCCCCACATTCAATGC +
Preference number: 4 (lower is better)
Translates to: TKAVLEKLQAATPPTPFTFGLKV*EPHIQC
Trigger: GCATTGAATGTGGGGCTCCCAGACCTTCAAACCAAA...GGTAAAGGGAGTGGGTGGGGTTGCTGCCTGCAATTTCTCTAAAACCGCTTTAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp GGGTTTATCTTAAAGATGGGGGCGAAGGGGGTGTCTGCAAAGAAGCAATTCAAACAGGTATTGGCCCTTTaGTTTGAAGGTCTGGGAGCC +
Preference number: 4 (lower is better)
Translates to: GFILKMGAKGVSAKKQFKQVLAL*FEGLGA
Trigger: GGCTCCCAGACCTTCAAACCAAAGGGCCAATACCTG...TTTGAATTGCTTCTTTGCAGACACCCCCTTCGCCCCCATCTTTAAGATAAACCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp TCTGGTGCATCTTTAATTCAGCAGCTGCCAGAATACTCACGGGTGCATCTTCATCAGGTATTGGCCCTTTaGTTTGAAGGTCTGGGAGCC +
Preference number: 4 (lower is better)
Translates to: SGASLIQQLPEYSRVHLHQVLAL*FEGLGA
Trigger: GGCTCCCAGACCTTCAAACCAAAGGGCCAATACCTG...ATGAAGATGCACCCGTGAGTATTCTGGCAGCTGCTGAATTAAAGATGCACCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR CCA 90 bp AACTTTTACAGCCACCCCTCTGGGAGTTGTACACACCTTTCAGTAGCCGAAGGGACCATATCCAGGTATTaGCCCTTTGGTTTGAAGGTC +
Preference number: 4 (lower is better)
Translates to: NFYSHPSGSCTHLSVAEGTISRY*PFGLKV
Trigger: GACCTTCAAACCAAAGGGCCAATACCTGGATATGGT...CCCTTCGGCTACTGAAAGGTGTGTACAACTCCCAGAGGGGTGGCTGTAAAAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp CCCCTGTCTCCTCTCCCAAGTCCCAGAATCTCTTCCACTCAACTCTACACTGTGCATTTTTGTGCATATTaGCTTCCTGTGTGGCTACAG +
Preference number: 4 (lower is better)
Translates to: PLSPLPSPRISSTQLYTVHFCAY*LPVWLQ
Trigger: CTGTAGCCACACAGGAAGCCAATATGCACAAAAATG...CACAGTGTAGAGTTGAGTGGAAGAGATTCTGGGACTTGGGAGAGGAGACAGGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp TGTGCACGTGTCTCTGTGAGCACATTCACGGTGCATGCACCATTTTTGATGTCTGGTCAGTATCTACAATaGGAGATGTGGCTGTACCCC +
Preference number: 4 (lower is better)
Translates to: CARVSVSTFTVHAPFLMSGQYLQ*EMWLYP
Trigger: GGGGTACAGCCACATCTCCCATTGTAGATACTGACC...AGACATCAAAAATGGTGCATGCACCGTGAATGTGCTCACAGAGACACGTGCACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp ACTTTCAGGTCAGCACGAGTGAAGCGTGGTTTCCTGAGCTTGAAGGGCTCTGAATTATCCCGCAGCAGTTaGTGGTCAGTATCTACAATG +
Preference number: 4 (lower is better)
Translates to: TFRSARVKRGFLSLKGSELSRSS*WSVSTM
Trigger: CATTGTAGATACTGACCACCAACTGCTGCGGGATAA...TTCAGAGCCCTTCAAGCTCAGGAAACCACGCTTCACTCGTGCTGACCTGAAAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp TCTGAACCAAGAAAGGTTGAGAGCTCCAGGTATTGTGTGGAGAACATTCTGGAGAGGGAGATGATGGTTTaGGGTTGGTCAGACCAGGAG +
Preference number: 4 (lower is better)
Translates to: SEPRKVESSRYCVENILEREMMV*GWSDQE
Trigger: CTCCTGGTCTGACCAACCCCAAACCATCATCTCCCT...CTCCAGAATGTTCTCCACACAATACCTGGAGCTCTCAACCTTTCTTGGTTCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp GGGTTTATCTTAAAGATGGGGGCGAAGGGGGTGTCTGCAAAGAAGCAATTCAAACAGAACGAGCATGCCTaGGCAGTTACATGTGCCAGA +
Preference number: 4 (lower is better)
Translates to: GFILKMGAKGVSAKKQFKQNEHA*AVTCAR
Trigger: TCTGGCACATGTAACTGCCCAGGCATGCTCGTTCTG...TTTGAATTGCTTCTTTGCAGACACCCCCTTCGCCCCCATCTTTAAGATAAACCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp TTAAGGGTTTACATTGCAGGGGGAAATGTACCTCGAGGTATTATTTTGTGTGAGCTGTCAGTGATGGCCTaGTGCTGTAACGCGCCACGG +
Preference number: 4 (lower is better)
Translates to: LRVYIAGGNVPRGIILCELSVMA*CCNAPR
Trigger: CCGTGGCGCGTTACAGCACCAGGCCATCACTGACAG...CTCACACAAAATAATACCTCGAGGTACATTTCCCCCTGCAATGTAAACCCTTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp TGTGCACGTGTCTCTGTGAGCACATTCACGGTGCATGCACCATTTTTGATGTCTCCTTTCTTTTGTTGCTaGGGTTGTGGGGACAAGGAG +
Preference number: 4 (lower is better)
Translates to: CARVSVSTFTVHAPFLMSPFFCC*GCGDKE
Trigger: CTCCTTGTCCCCACAACCCCAGCAACAAAAGAAAGG...AGACATCAAAAATGGTGCATGCACCGTGAATGTGCTCACAGAGACACGTGCACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp GGGTTTATCTTAAAGATGGGGGCGAAGGGGGTGTCTGCAAAGAAGCAATTCAAACTTTACCTGTCGAGCTaGAGTTTCCTTCCCACTGGG +
Preference number: 4 (lower is better)
Translates to: GFILKMGAKGVSAKKQFKLYLSS*SFLPTG
Trigger: CCCAGTGGGAAGGAAACTCCAGCTCGACAGGTAAAG...TTTGAATTGCTTCTTTGCAGACACCCCCTTCGCCCCCATCTTTAAGATAAACCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp CACACACATGTGCGTCCCCCTTGCTCAGGATGTCTGGGTGTATGTACGAAGGCAACACAGGAAGGAACTTaGCATTCTACATTACTGAGA +
Preference number: 4 (lower is better)
Translates to: HTHVRPPCSGCLGVCTKATQEGT*HSTLLR
Trigger: TCTCAGTAATGTAGAATGCCAAGTTCCTTCCTGTGT...TGCCTTCGTACATACACCCAGACATCCTGAGCAAGGGGGACGCACATGTGTGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp TCCCTAATGACTAAAGCTGACCGTCTGTTTGTTTGTATCCAACGGATAGCTTCTTTCAGAGGCATGGGGTaGGGAGGTATGGTGAGCAGG +
Preference number: 4 (lower is better)
Translates to: SLMTKADRLFVCIQRIASFRGMG*GGMVSR
Trigger: CCTGCTCACCATACCTCCCCACCCCATGCCTCTGAA...AGAAGCTATCCGTTGGATACAAACAAACAGACGGTCAGCTTTAGTCATTAGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp TGTGCACGTGTCTCTGTGAGCACATTCACGGTGCATGCACCATTTTTGATGTCTCACCTCGTAGGTTCATaGCCTCTTTCTTCAGAGGCA +
Preference number: 4 (lower is better)
Translates to: CARVSVSTFTVHAPFLMSHLVGS*PLSSEA
Trigger: TGCCTCTGAAGAAAGAGGCCATGAACCTACGAGGTG...AGACATCAAAAATGGTGCATGCACCGTGAATGTGCTCACAGAGACACGTGCACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp TCTGAACCAAGAAAGGTTGAGAGCTCCAGGTATTGTGTGGAGAACATTCTGGAGGTAAACCTGCGCTCTTaGACTAACGTGGGTCTGCGT +
Preference number: 4 (lower is better)
Translates to: SEPRKVESSRYCVENILEVNLRS*TNVGLR
Trigger: ACGCAGACCCACGTTAGTCCAAGAGCGCAGGTTTAC...CTCCAGAATGTTCTCCACACAATACCTGGAGCTCTCAACCTTTCTTGGTTCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp GGGTTTATCTTAAAGATGGGGGCGAAGGGGGTGTCTGCAAAGAAGCAATTCAAAGTAAACCTGCGCTCTTaGACTAACGTGGGTCTGCGT +
Preference number: 4 (lower is better)
Translates to: GFILKMGAKGVSAKKQFKVNLRS*TNVGLR
Trigger: ACGCAGACCCACGTTAGTCCAAGAGCGCAGGTTTAC...TTTGAATTGCTTCTTTGCAGACACCCCCTTCGCCCCCATCTTTAAGATAAACCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp TCTGAACCAAGAAAGGTTGAGAGCTCCAGGTATTGTGTGGAGAACATTCTGGAGGCTGAAGGAATCGAGTaGGAGGGACTGTTCTCCTCT +
Preference number: 4 (lower is better)
Translates to: SEPRKVESSRYCVENILEAEGIE*EGLFSS
Trigger: AGAGGAGAACAGTCCCTCCCACTCGATTCCTTCAGC...CTCCAGAATGTTCTCCACACAATACCTGGAGCTCTCAACCTTTCTTGGTTCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp ACTAAAGCGGTTTTAGAGAAATTGCAGGCAGCAACCCCACCCACTCCCTTTACCGTTCCATTGCTGCACTaGATTAACACTGCACGGCTA +
Preference number: 4 (lower is better)
Translates to: TKAVLEKLQAATPPTPFTVPLLH*INTARL
Trigger: TAGCCGTGCAGTGTTAATCCAGTGCAGCAATGGAAC...GGTAAAGGGAGTGGGTGGGGTTGCTGCCTGCAATTTCTCTAAAACCGCTTTAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp GGGTTTATCTTAAAGATGGGGGCGAAGGGGGTGTCTGCAAAGAAGCAATTCAAACACCTCGCAGCTCATTaGCTTCATACAGCCTGCCAA +
Preference number: 4 (lower is better)
Translates to: GFILKMGAKGVSAKKQFKHLAAH*LHTACQ
Trigger: TTGGCAGGCTGTATGAAGCCAATGAGCTGCGAGGTG...TTTGAATTGCTTCTTTGCAGACACCCCCTTCGCCCCCATCTTTAAGATAAACCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp TCTGAACCAAGAAAGGTTGAGAGCTCCAGGTATTGTGTGGAGAACATTCTGGAGAGTCCCTGCAGGGGATaGATCTGCTGGAAGAGAGAA +
Preference number: 4 (lower is better)
Translates to: SEPRKVESSRYCVENILESPCRG*ICWKRE
Trigger: TTCTCTCTTCCAGCAGATCCATCCCCTGCAGGGACT...CTCCAGAATGTTCTCCACACAATACCTGGAGCTCTCAACCTTTCTTGGTTCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp AACTTTTACAGCCACCCCTCTGGGAGTTGTACACACCTTTCAGTAGCCGAAGGGGCCCAAATCAGAAGGTaGGTGGATAATATGCATGCA +
Preference number: 4 (lower is better)
Translates to: NFYSHPSGSCTHLSVAEGAQIRR*VDNMHA
Trigger: TGCATGCATATTATCCACCCACCTTCTGATTTGGGC...CCCTTCGGCTACTGAAAGGTGTGTACAACTCCCAGAGGGGTGGCTGTAAAAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp CTCTCCACACTCGAGACTTGCAGATGCACGTGTGACGGTGCCATTCTTCGTATATCCAGTGCTAGAATTTaGTTGGTTTGGACCACTCCA +
Preference number: 4 (lower is better)
Translates to: LSTLETCRCTCDGAILRISSARI*LVWTTP
Trigger: TGGAGTGGTCCAAACCAACCAAATTCTAGCACTGGA...TATACGAAGAATGGCACCGTCACACGTGCATCTGCAAGTCTCGAGTGTGGAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR CCA 90 bp TTAAGGGTTTACATTGCAGGGGGAAATGTACCTCGAGGTATTATTTTGTGTGAGGCCTGGGCATTGCCTTaGTTTTCAGGGAGGGGGTGG +
Preference number: 4 (lower is better)
Translates to: LRVYIAGGNVPRGIILCEAWALP*FSGRGW
Trigger: CCACCCCCTCCCTGAAAACCAAGGCAATGCCCAGGC...CTCACACAAAATAATACCTCGAGGTACATTTCCCCCTGCAATGTAAACCCTTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp TCCCTAATGACTAAAGCTGACCGTCTGTTTGTTTGTATCCAACGGATAGCTTCTGACAATCAGGATGTGTaGGCCTGTACGACCGACGGC +
Preference number: 4 (lower is better)
Translates to: SLMTKADRLFVCIQRIASDNQDV*ACTTDG
Trigger: GCCGTCGGTCGTACAGGCCCACACATCCTGATTGTC...AGAAGCTATCCGTTGGATACAAACAAACAGACGGTCAGCTTTAGTCATTAGGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp GGGTTTATCTTAAAGATGGGGGCGAAGGGGGTGTCTGCAAAGAAGCAATTCAAATGTTTGAGAGCACCCTaGGGTCCAAATCAGTTCGGC +
Preference number: 4 (lower is better)
Translates to: GFILKMGAKGVSAKKQFKCLRAP*GPNQFG
Trigger: GCCGAACTGATTTGGACCCCAGGGTGCTCTCAAACA...TTTGAATTGCTTCTTTGCAGACACCCCCTTCGCCCCCATCTTTAAGATAAACCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp TGGAATTCTGACGACTGGCCTCTGATATATACAGGACAATCCAAGCTTTGGTGGTTTCCCCTCAGGCCTTaGCACCTCTTCAATGTCCCA +
Preference number: 4 (lower is better)
Translates to: WNSDDWPLIYTGQSKLWWFPLRP*HLFNVP
Trigger: TGGGACATTGAAGAGGTGCCAAGGCCTGAGGGGAAA...CCACCAAAGCTTGGATTGTCCTGTATATATCAGAGGCCAGTCGTCAGAATTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR CCA 90 bp TCCCTAATGACTAAAGCTGACCGTCTGTTTGTTTGTATCCAACGGATAGCTTCTAGCCCCCTGAGTTCTTaGTCTGTGTGGCAGCGCTCT +
Preference number: 4 (lower is better)
Translates to: SLMTKADRLFVCIQRIASSPLSS*SVWQRS
Trigger: AGAGCGCTGCCACACAGACCAAGAACTCAGGGGGCT...AGAAGCTATCCGTTGGATACAAACAAACAGACGGTCAGCTTTAGTCATTAGGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp ACTAAAGCGGTTTTAGAGAAATTGCAGGCAGCAACCCCACCCACTCCCTTTACCGTCCTCCTCCCCAGTTaGAAGAGTTGTTGTTCTTGT +
Preference number: 4 (lower is better)
Translates to: TKAVLEKLQAATPPTPFTVLLPS*KSCCSC
Trigger: ACAAGAACAACAACTCTTCCAACTGGGGAGGAGGAC...GGTAAAGGGAGTGGGTGGGGTTGCTGCCTGCAATTTCTCTAAAACCGCTTTAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp TGTGCACGTGTCTCTGTGAGCACATTCACGGTGCATGCACCATTTTTGATGTCTACCCCTGATCCTTGCTaGGATTCTCATTCCAAGAGG +
Preference number: 4 (lower is better)
Translates to: CARVSVSTFTVHAPFLMSTPDPC*DSHSKR
Trigger: CCTCTTGGAATGAGAATCCCAGCAAGGATCAGGGGT...AGACATCAAAAATGGTGCATGCACCGTGAATGTGCTCACAGAGACACGTGCACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp AATTCAGCAGCTGCCAGAATACTCACGGGTGCATCTTCATGCATGTTTGTCTACTGCTCCAGCTGGAATTaGAAGGTCGAACGTTGCCTG +
Preference number: 4 (lower is better)
Translates to: NSAAARILTGASSCMFVYCSSWN*KVERCL
Trigger: CAGGCAACGTTCGACCTTCCAATTCCAGCTGGAGCA...GTAGACAAACATGCATGAAGATGCACCCGTGAGTATTCTGGCAGCTGCTGAATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446273.1
3UTR CAA 72 bp ATTTTTGATGTCTTCTGTGAGATCACTGCATACACTTaGGTCACTGGTGTGTGCAAAGGGTGGTGGTGGGGG +
Preference number: 4 (lower is better)
Translates to: IFDVFCEITAYT*VTGVCKGWWWG
Trigger: CCCCCACCACCACCCTTTGCACACACCAGTGACCAAAGTGTATGCAGTGATCTCACAGAAGACATCAAAAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp ACTTTCAGGTCAGCACGAGTGAAGCGTGGTTTCCTGAGCTTGAAGGGCTCTGAACAGCAATCCCATATTTaGAAACTGTTTGGCAAGAGG +
Preference number: 4 (lower is better)
Translates to: TFRSARVKRGFLSLKGSEQQSHI*KLFGKR
Trigger: CCTCTTGCCAAACAGTTTTCAAATATGGGATTGCTG...TTCAGAGCCCTTCAAGCTCAGGAAACCACGCTTCACTCGTGCTGACCTGAAAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp TTAAGGGTTTACATTGCAGGGGGAAATGTACCTCGAGGTATTATTTTGTGTGAGACTGGGGCCCCACATTaGAAAGACCTGGACTCAGGC +
Preference number: 4 (lower is better)
Translates to: LRVYIAGGNVPRGIILCETGAPH*KDLDSG
Trigger: GCCTGAGTCCAGGTCTTTTCAATGTGGGGCCCCAGT...CTCACACAAAATAATACCTCGAGGTACATTTCCCCCTGCAATGTAAACCCTTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp GGATTTTTGCTGTACCTTCCTGTTACCTGTTTGTGTGCAAAGTTGGAAAGCTGCGTAACTAGGACGAACTaGGCCACCATCACTCCAGGT +
Preference number: 4 (lower is better)
Translates to: GFLLYLPVTCLCAKLESCVTRTN*ATITPG
Trigger: ACCTGGAGTGATGGTGGCTCAGTTCGTCCTAGTTAC...GCAGCTTTCCAACTTTGCACACAAACAGGTAACAGGAAGGTACAGCAAAAATCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp GGGTTTATCTTAAAGATGGGGGCGAAGGGGGTGTCTGCAAAGAAGCAATTCAAAGATCGTTCTCAAGGTTaGCCCATCAATCTGTGGGGT +
Preference number: 4 (lower is better)
Translates to: GFILKMGAKGVSAKKQFKDRSQG*PINLWG
Trigger: ACCCCACAGATTGATGGGTCAACCTTGAGAACGATC...TTTGAATTGCTTCTTTGCAGACACCCCCTTCGCCCCCATCTTTAAGATAAACCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp CCCCTGTCTCCTCTCCCAAGTCCCAGAATCTCTTCCACTCAACTCTACACTGTGAACATCACCAAAAACTaGAAGGAAACACTCCACATC +
Preference number: 4 (lower is better)
Translates to: PLSPLPSPRISSTQLYTVNITKN*KETLHI
Trigger: GATGTGGAGTGTTTCCTTTCAGTTTTTGGTGATGTT...CACAGTGTAGAGTTGAGTGGAAGAGATTCTGGGACTTGGGAGAGGAGACAGGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp ACTTTCAGGTCAGCACGAGTGAAGCGTGGTTTCCTGAGCTTGAAGGGCTCTGAAAACGACCATGAGGTCTaGAGACTGACAATTCATTGT +
Preference number: 4 (lower is better)
Translates to: TFRSARVKRGFLSLKGSENDHEV*RLTIHC
Trigger: ACAATGAATTGTCAGTCTTCAGACCTCATGGTCGTT...TTCAGAGCCCTTCAAGCTCAGGAAACCACGCTTCACTCGTGCTGACCTGAAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp TCTGAACCAAGAAAGGTTGAGAGCTCCAGGTATTGTGTGGAGAACATTCTGGAGACAGCCAAAGCCACATaGGCACAAACATACAGACGG +
Preference number: 4 (lower is better)
Translates to: SEPRKVESSRYCVENILETAKAT*AQTYRR
Trigger: CCGTCTGTATGTTTGTGCTCATGTGGCTTTGGCTGT...CTCCAGAATGTTCTCCACACAATACCTGGAGCTCTCAACCTTTCTTGGTTCAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp GGGTTTATCTTAAAGATGGGGGCGAAGGGGGTGTCTGCAAAGAAGCAATTCAAAAACAGCAACGTGATGTaGCGCCCATGTGGGAATGTA +
Preference number: 4 (lower is better)
Translates to: GFILKMGAKGVSAKKQFKNSNVM*RPCGNV
Trigger: TACATTCCCACATGGGCGTCACATCACGTTGCTGTT...TTTGAATTGCTTCTTTGCAGACACCCCCTTCGCCCCCATCTTTAAGATAAACCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp GGGTTTATCTTAAAGATGGGGGCGAAGGGGGTGTCTGCAAAGAAGCAATTCAAACTCCCTGTGTCTTCCTaGATGAAGCTGAAGGAATCG +
Preference number: 4 (lower is better)
Translates to: GFILKMGAKGVSAKKQFKLPVSS*MKLKES
Trigger: CGATTCCTTCAGCTTCATTCAGGAAGACACAGGGAG...TTTGAATTGCTTCTTTGCAGACACCCCCTTCGCCCCCATCTTTAAGATAAACCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp AACTTTTACAGCCACCCCTCTGGGAGTTGTACACACCTTTCAGTAGCCGAAGGGAAAAGGATAATCCACTaGTGTCAGAAAGGAGAGAGG +
Preference number: 4 (lower is better)
Translates to: NFYSHPSGSCTHLSVAEGKRIIH*CQKGER
Trigger: CCTCTCTCCTTTCTGACATCAGTGGATTATCCTTTT...CCCTTCGGCTACTGAAAGGTGTGTACAACTCCCAGAGGGGTGGCTGTAAAAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp ACTAAAGCGGTTTTAGAGAAATTGCAGGCAGCAACCCCACCCACTCCCTTTACCGCTGACAGATCCACATaGGCAGCATTTGTTAAAAGC +
Preference number: 4 (lower is better)
Translates to: TKAVLEKLQAATPPTPFTADRST*AAFVKS
Trigger: GCTTTTAACAAATGCTGCTCATGTGGATCTGTCAGC...GGTAAAGGGAGTGGGTGGGGTTGCTGCCTGCAATTTCTCTAAAACCGCTTTAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp AATGAAGCTGAAGGAATCGAGTGGGAGGGACTGTTCTCCTCTTTGGGGGAGCTCAGAAGCAATTCAAAATaGTCCATTCCAACCCTGCTT +
Preference number: 4 (lower is better)
Translates to: NEAEGIEWEGLFSSLGELRSNSK*SIPTLL
Trigger: AAGCAGGGTTGGAATGGATCATTTTGAATTGCTTCT...GAGCTCCCCCAAAGAGGAGAACAGTCCCTCCCACTCGATTCCTTCAGCTTCATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp CCCCTGTCTCCTCTCCCAAGTCCCAGAATCTCTTCCACTCAACTCTACACTGTGCTGAAAAGGGCTTCTTaGCTAGTAAAGGGTTTATCT +
Preference number: 4 (lower is better)
Translates to: PLSPLPSPRISSTQLYTVLKRAS*LVKGLS
Trigger: AGATAAACCCTTTACTAGTCAAGAAGCCCTTTTCAG...CACAGTGTAGAGTTGAGTGGAAGAGATTCTGGGACTTGGGAGAGGAGACAGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp TCCCTAATGACTAAAGCTGACCGTCTGTTTGTTTGTATCCAACGGATAGCTTCTGTGCACGTGTCTCTGTaGGCACATTCACGGTGCATG +
Preference number: 4 (lower is better)
Translates to: SLMTKADRLFVCIQRIASVHVSL*AHSRCM
Trigger: CATGCACCGTGAATGTGCTCACAGAGACACGTGCAC...AGAAGCTATCCGTTGGATACAAACAAACAGACGGTCAGCTTTAGTCATTAGGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp ACTAAAGCGGTTTTAGAGAAATTGCAGGCAGCAACCCCACCCACTCCCTTTACCAGGAGTGGGAACAGTTaGGCTGTTGTATCTGCTTTT +
Preference number: 4 (lower is better)
Translates to: TKAVLEKLQAATPPTPFTRSGNS*AVVSAF
Trigger: AAAAGCAGATACAACAGCTCAACTGTTCCCACTCCT...GGTAAAGGGAGTGGGTGGGGTTGCTGCCTGCAATTTCTCTAAAACCGCTTTAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp TGTGCACGTGTCTCTGTGAGCACATTCACGGTGCATGCACCATTTTTGATGTCTGGTCCAATTCTATCCTaGCCACTCACATTCCTCCAA +
Preference number: 4 (lower is better)
Translates to: CARVSVSTFTVHAPFLMSGPILS*PLTFLQ
Trigger: TTGGAGGAATGTGAGTGGTCAGGATAGAATTGGACC...AGACATCAAAAATGGTGCATGCACCGTGAATGTGCTCACAGAGACACGTGCACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp GGGTTTATCTTAAAGATGGGGGCGAAGGGGGTGTCTGCAAAGAAGCAATTCAAATGTTCCCTGGATGTCTaGCCTACTGTGCTAACCTGT +
Preference number: 4 (lower is better)
Translates to: GFILKMGAKGVSAKKQFKCSLDV*PTVLTC
Trigger: ACAGGTTAGCACAGTAGGTCAGACATCCAGGGAACA...TTTGAATTGCTTCTTTGCAGACACCCCCTTCGCCCCCATCTTTAAGATAAACCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp TCTGAACCAAGAAAGGTTGAGAGCTCCAGGTATTGTGTGGAGAACATTCTGGAGTTGTCCGTTCGGCACTaGCACCCTTTTGGCATTGTT +
Preference number: 4 (lower is better)
Translates to: SEPRKVESSRYCVENILELSVRH*HPFGIV
Trigger: AACAATGCCAAAAGGGTGGCAGTGCCGAACGGACAA...CTCCAGAATGTTCTCCACACAATACCTGGAGCTCTCAACCTTTCTTGGTTCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp GGATTTTTGCTGTACCTTCCTGTTACCTGTTTGTGTGCAAAGTTGGAAAGCTGCCGCTCCTGTCACTTGTaGGTTGTTTGGGTTTGCTCC +
Preference number: 4 (lower is better)
Translates to: GFLLYLPVTCLCAKLESCRSCHL*VVWVCS
Trigger: GGAGCAAACCCAAACAACGCACAAGTGACAGGAGCG...GCAGCTTTCCAACTTTGCACACAAACAGGTAACAGGAAGGTACAGCAAAAATCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp TTAAGGGTTTACATTGCAGGGGGAAATGTACCTCGAGGTATTATTTTGTGTGAGGTCCCACTCTCACTCTaGAGCAGCGCTCCTGTCACT +
Preference number: 4 (lower is better)
Translates to: LRVYIAGGNVPRGIILCEVPLSL*SSAPVT
Trigger: AGTGACAGGAGCGCTGCTGCAGAGTGAGAGTGGGAC...CTCACACAAAATAATACCTCGAGGTACATTTCCCCCTGCAATGTAAACCCTTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp TTAAGGGTTTACATTGCAGGGGGAAATGTACCTCGAGGTATTATTTTGTGTGAGCAGGTGGTGTGCTTTTaGTCCAGACTGGCGCAGTCC +
Preference number: 4 (lower is better)
Translates to: LRVYIAGGNVPRGIILCEQVVCF*SRLAQS
Trigger: GGACTGCGCCAGTCTGGAGCAAAAGCACACCACCTG...CTCACACAAAATAATACCTCGAGGTACATTTCCCCCTGCAATGTAAACCCTTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000301923.13
CDS-3UTR GCA 90 bp CCACACTCGAGACTTGCAGATGCACGTGTGACGGTGCCATTCTTCGTATATGTTCAGACCTCTCGATTGTaGTGTGCTGTTTCCAAACAA +
Preference number: 4 (lower is better)
Translates to: PHSRLADARVTVPFFVYVQTSRL*CAVSKQ
Trigger: TTGTTTGGAAACAGCACAGCACAATCGAGAGGTCTG...AACATATACGAAGAATGGCACCGTCACACGTGCATCTGCAAGTCTCGAGTGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR GCA 90 bp TGGAATTCTGACGACTGGCCTCTGATATATACAGGACAATCCAAGCTTTGGTGGGAAGAATTTAGTGGCTaGACGGGTGTGTGCAGACCT +
Preference number: 4 (lower is better)
Translates to: WNSDDWPLIYTGQSKLWWEEFSG*TGVCRP
Trigger: AGGTCTGCACACACCCGTGCAGCCACTAAATTCTTC...CCACCAAAGCTTGGATTGTCCTGTATATATCAGAGGCCAGTCGTCAGAATTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR GCA 90 bp TTAAGGGTTTACATTGCAGGGGGAAATGTACCTCGAGGTATTATTTTGTGTGAGCCTTCCCACCAACCATaGCATAGTCCATGCCGCCAG +
Preference number: 4 (lower is better)
Translates to: LRVYIAGGNVPRGIILCEPSHQP*HSPCRQ
Trigger: CTGGCGGCATGGACTATGGCATGGTTGGTGGGAAGG...CTCACACAAAATAATACCTCGAGGTACATTTCCCCCTGCAATGTAAACCCTTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp TCCCTAATGACTAAAGCTGACCGTCTGTTTGTTTGTATCCAACGGATAGCTTCTATCGGGGTGCTGTGCTaGTCCAGGGAGATGATGGTT +
Preference number: 4 (lower is better)
Translates to: SLMTKADRLFVCIQRIASIGVLC*SREMMV
Trigger: AACCATCATCTCCCTGGAGCAGCACAGCACCCCGAT...AGAAGCTATCCGTTGGATACAAACAAACAGACGGTCAGCTTTAGTCATTAGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp GGATTTTTGCTGTACCTTCCTGTTACCTGTTTGTGTGCAAAGTTGGAAAGCTGCGTGGGCCATGCTGCATaGAGATCGTTCTCAAGGTTG +
Preference number: 4 (lower is better)
Translates to: GFLLYLPVTCLCAKLESCVGHAA*RSFSRL
Trigger: CAACCTTGAGAACGATCTGCATGCAGCATGGCCCAC...GCAGCTTTCCAACTTTGCACACAAACAGGTAACAGGAAGGTACAGCAAAAATCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp TCCCTAATGACTAAAGCTGACCGTCTGTTTGTTTGTATCCAACGGATAGCTTCTGTCAGCAGTGGGCCATaGTGCATGCAGATCGTTCTC +
Preference number: 4 (lower is better)
Translates to: SLMTKADRLFVCIQRIASVSSGP*CMQIVL
Trigger: GAGAACGATCTGCATGCAGCATGGCCCACTGCTGAC...AGAAGCTATCCGTTGGATACAAACAAACAGACGGTCAGCTTTAGTCATTAGGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp TCTGAACCAAGAAAGGTTGAGAGCTCCAGGTATTGTGTGGAGAACATTCTGGAGATCGGATCAGGGCAGTaGCCTGGGTTAGATTCAGAT +
Preference number: 4 (lower is better)
Translates to: SEPRKVESSRYCVENILEIGSGQ*PGLDSD
Trigger: ATCTGAATCTAACCCAGGGCACTGCCCTGATCCGAT...CTCCAGAATGTTCTCCACACAATACCTGGAGCTCTCAACCTTTCTTGGTTCAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp TCTGGTGCATCTTTAATTCAGCAGCTGCCAGAATACTCACGGGTGCATCTTCATATCGGATCAGGGCAGTaGCCTGGGTTAGATTCAGAT +
Preference number: 4 (lower is better)
Translates to: SGASLIQQLPEYSRVHLHIGSGQ*PGLDSD
Trigger: ATCTGAATCTAACCCAGGGCACTGCCCTGATCCGAT...ATGAAGATGCACCCGTGAGTATTCTGGCAGCTGCTGAATTAAAGATGCACCAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR GCA 90 bp GGGTTTATCTTAAAGATGGGGGCGAAGGGGGTGTCTGCAAAGAAGCAATTCAAAGCAGCCCAATGGAGTTaGTTTAGTAGCAGTGGCTCT +
Preference number: 4 (lower is better)
Translates to: GFILKMGAKGVSAKKQFKAAQWS*FSSSGS
Trigger: AGAGCCACTGCTACTAAAGCAACTCCATTGGGCTGC...TTTGAATTGCTTCTTTGCAGACACCCCCTTCGCCCCCATCTTTAAGATAAACCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp TCTGAACCAAGAAAGGTTGAGAGCTCCAGGTATTGTGTGGAGAACATTCTGGAGGCAGCCCAATGGAGTTaGTTTAGTAGCAGTGGCTCT +
Preference number: 4 (lower is better)
Translates to: SEPRKVESSRYCVENILEAAQWS*FSSSGS
Trigger: AGAGCCACTGCTACTAAAGCAACTCCATTGGGCTGC...CTCCAGAATGTTCTCCACACAATACCTGGAGCTCTCAACCTTTCTTGGTTCAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp CACACACATGTGCGTCCCCCTTGCTCAGGATGTCTGGGTGTATGTACGAAGGCAGACTTTCCAAATCACTaGAGTTGTCACAATTACACA +
Preference number: 4 (lower is better)
Translates to: HTHVRPPCSGCLGVCTKADFPNH*SCHNYT
Trigger: TGTGTAATTGTGACAACTGCAGTGATTTGGAAAGTC...TGCCTTCGTACATACACCCAGACATCCTGAGCAAGGGGGACGCACATGTGTGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp ACTTTCAGGTCAGCACGAGTGAAGCGTGGTTTCCTGAGCTTGAAGGGCTCTGAATTCCTTTCACAGCTCTaGTACAACAGCATCATAAGC +
Preference number: 4 (lower is better)
Translates to: TFRSARVKRGFLSLKGSEFLSQL*YNSIIS
Trigger: GCTTATGATGCTGTTGTAGCAGAGCTGTGAAAGGAA...TTCAGAGCCCTTCAAGCTCAGGAAACCACGCTTCACTCGTGCTGACCTGAAAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp TTAAGGGTTTACATTGCAGGGGGAAATGTACCTCGAGGTATTATTTTGTGTGAGCCTGGCCATCAGACCTaGCAGCAACAGTGGCAAGAG +
Preference number: 4 (lower is better)
Translates to: LRVYIAGGNVPRGIILCEPGHQT*QQQWQE
Trigger: CTCTTGCCACTGTTGCTGGCAGGTCTGATGGCCAGG...CTCACACAAAATAATACCTCGAGGTACATTTCCCCCTGCAATGTAAACCCTTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp GGGTTTATCTTAAAGATGGGGGCGAAGGGGGTGTCTGCAAAGAAGCAATTCAAAATACAGCCTGCCAAATaGAAGGGAAGCAGAGAGAGG +
Preference number: 4 (lower is better)
Translates to: GFILKMGAKGVSAKKQFKIQPAK*KGSRER
Trigger: CCTCTCTCTGCTTCCCTTGCATTTGGCAGGCTGTAT...TTTGAATTGCTTCTTTGCAGACACCCCCTTCGCCCCCATCTTTAAGATAAACCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp GGGTTTATCTTAAAGATGGGGGCGAAGGGGGTGTCTGCAAAGAAGCAATTCAAATGGCTTCATACAGCCTaGCAAATGCAAGGGAAGCAG +
Preference number: 4 (lower is better)
Translates to: GFILKMGAKGVSAKKQFKWLHTA*QMQGKQ
Trigger: CTGCTTCCCTTGCATTTGGCAGGCTGTATGAAGCCA...TTTGAATTGCTTCTTTGCAGACACCCCCTTCGCCCCCATCTTTAAGATAAACCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp TGTGCACGTGTCTCTGTGAGCACATTCACGGTGCATGCACCATTTTTGATGTCTCCTAGACCAGAGCAATaGAGGCGCTATGATTCATCA +
Preference number: 4 (lower is better)
Translates to: CARVSVSTFTVHAPFLMSPRPEQ*RRYDSS
Trigger: TGATGAATCATAGCGCCTGCATTGCTCTGGTCTAGG...AGACATCAAAAATGGTGCATGCACCGTGAATGTGCTCACAGAGACACGTGCACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp TCTGAACCAAGAAAGGTTGAGAGCTCCAGGTATTGTGTGGAGAACATTCTGGAGGTTTACATACTGGTCTaGTGTCACTGTGTGGGAGGC +
Preference number: 4 (lower is better)
Translates to: SEPRKVESSRYCVENILEVYILV*CHCVGG
Trigger: GCCTCCCACACAGTGACAGCAGACCAGTATGTAAAC...CTCCAGAATGTTCTCCACACAATACCTGGAGCTCTCAACCTTTCTTGGTTCAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp TCCCTAATGACTAAAGCTGACCGTCTGTTTGTTTGTATCCAACGGATAGCTTCTTTGCCCACACTGGAGTaGAGTGGTGCAATCTCGGCT +
Preference number: 4 (lower is better)
Translates to: SLMTKADRLFVCIQRIASLPTLE*SGAISA
Trigger: AGCCGAGATTGCACCACTGCACTCCAGTGTGGGCAA...AGAAGCTATCCGTTGGATACAAACAAACAGACGGTCAGCTTTAGTCATTAGGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp TCTGAACCAAGAAAGGTTGAGAGCTCCAGGTATTGTGTGGAGAACATTCTGGAGACCCTGGCACTAGATTaGTGGAAGAGATGGCAGCTA +
Preference number: 4 (lower is better)
Translates to: SEPRKVESSRYCVENILETLALD*WKRWQL
Trigger: TAGCTGCCATCTCTTCCAGCAATCTAGTGCCAGGGT...CTCCAGAATGTTCTCCACACAATACCTGGAGCTCTCAACCTTTCTTGGTTCAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp AACTTTTACAGCCACCCCTCTGGGAGTTGTACACACCTTTCAGTAGCCGAAGGGCACATTCACGGTGCATaGACCATTTTTGATGTCTTC +
Preference number: 4 (lower is better)
Translates to: NFYSHPSGSCTHLSVAEGHIHGA*TIFDVF
Trigger: GAAGACATCAAAAATGGTGCATGCACCGTGAATGTG...CCCTTCGGCTACTGAAAGGTGTGTACAACTCCCAGAGGGGTGGCTGTAAAAGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp ACTTTCAGGTCAGCACGAGTGAAGCGTGGTTTCCTGAGCTTGAAGGGCTCTGAACACATTCACGGTGCATaGACCATTTTTGATGTCTTC +
Preference number: 4 (lower is better)
Translates to: TFRSARVKRGFLSLKGSEHIHGA*TIFDVF
Trigger: GAAGACATCAAAAATGGTGCATGCACCGTGAATGTG...TTCAGAGCCCTTCAAGCTCAGGAAACCACGCTTCACTCGTGCTGACCTGAAAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp AACTTTTACAGCCACCCCTCTGGGAGTTGTACACACCTTTCAGTAGCCGAAGGGAAGATTCAGTGTCTTTaGTGGCAATACAAGGCCACT +
Preference number: 4 (lower is better)
Translates to: NFYSHPSGSCTHLSVAEGKIQCL*WQYKAT
Trigger: AGTGGCCTTGTATTGCCAGCAAAGACACTGAATCTT...CCCTTCGGCTACTGAAAGGTGTGTACAACTCCCAGAGGGGTGGCTGTAAAAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp TCCCTAATGACTAAAGCTGACCGTCTGTTTGTTTGTATCCAACGGATAGCTTCTTCCTTCTTGGACCAGTaGTGGCCAGGCAGATGGGTT +
Preference number: 4 (lower is better)
Translates to: SLMTKADRLFVCIQRIASSFLDQ*WPGRWV
Trigger: AACCCATCTGCCTGGCCAGCACTGGTCCAAGAAGGA...AGAAGCTATCCGTTGGATACAAACAAACAGACGGTCAGCTTTAGTCATTAGGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp CAGCTGCCAGAATACTCACGGGTGCATCTTCATGCATGTTTGTCTACGTGGGTGCTTTTGATTGTCCCATaGTCCAGTGCTAGAATTTGG +
Preference number: 4 (lower is better)
Translates to: QLPEYSRVHLHACLSTWVLLIVP*SSARIW
Trigger: CCAAATTCTAGCACTGGAGCATGGGACAATCAAAAG...CACCCACGTAGACAAACATGCATGAAGATGCACCCGTGAGTATTCTGGCAGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR GCA 90 bp AATTCAGCAGCTGCCAGAATACTCACGGGTGCATCTTCATGCATGTTTGTCTACTGCTGTGGGGGCTGCTaGTGTTGGTGTTGTTTATTC +
Preference number: 4 (lower is better)
Translates to: NSAAARILTGASSCMFVYCCGGC*CWCCLF
Trigger: GAATAAACAACACCAACAGCAGCAGCCCCCACAGCA...GTAGACAAACATGCATGAAGATGCACCCGTGAGTATTCTGGCAGCTGCTGAATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR GCA 90 bp TCTGGTGCATCTTTAATTCAGCAGCTGCCAGAATACTCACGGGTGCATCTTCATCAGGTGGTGTGCTTTTaGTCCAGACTGATGCCGATT +
Preference number: 4 (lower is better)
Translates to: SGASLIQQLPEYSRVHLHQVVCF*SRLMPI
Trigger: AATCGGCATCAGTCTGGAGCAAAAGCACACCACCTG...ATGAAGATGCACCCGTGAGTATTCTGGCAGCTGCTGAATTAAAGATGCACCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR GCA 90 bp TCTGACGACTGGCCTCTGATATATACAGGACAATCCAAGCTTTGGTGGAAAAGACTGGAGCAGGTGGTGTaGTTTTGCTCCAGACTGATG +
Preference number: 4 (lower is better)
Translates to: SDDWPLIYTGQSKLWWKRLEQVV*FCSRLM
Trigger: CATCAGTCTGGAGCAAAAGCACACCACCTGCTCCAG...TCTTTTCCACCAAAGCTTGGATTGTCCTGTATATATCAGAGGCCAGTCGTCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR GCA 90 bp AATTCAGCAGCTGCCAGAATACTCACGGGTGCATCTTCATGCATGTTTGTCTACCCGAATACTCACATGTaGAGTGCAGTTTGGGCCTTG +
Preference number: 4 (lower is better)
Translates to: NSAAARILTGASSCMFVYPNTHM*SAVWAL
Trigger: CAAGGCCCAAACTGCACTGCACATGTGAGTATTCGG...GTAGACAAACATGCATGAAGATGCACCCGTGAGTATTCTGGCAGCTGCTGAATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR CCA 90 bp AATGAAGCTGAAGGAATCGAGTGGGAGGGACTGTTCTCCTCTTTGGGGGAGCTCCCTCATTGGTTTGCATaGGAACAGATTTTGTGCAAA +
Preference number: 4 (lower is better)
Translates to: NEAEGIEWEGLFSSLGELPHWFA*EQILCK
Trigger: TTTGCACAAAATCTGTTCCCATGCAAACCAATGAGG...GAGCTCCCCCAAAGAGGAGAACAGTCCCTCCCACTCGATTCCTTCAGCTTCATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000301923.13
CDS-3UTR CCA 90 bp TCTGAACCAAGAAAGGTTGAGAGCTCCAGGTATTGTGTGGAGAACATTCTGGAGCACTTGTGCGTTGTTTaGGTTTGCTCCAGGTGCTGT +
Preference number: 4 (lower is better)
Translates to: SEPRKVESSRYCVENILEHLCVV*VCSRCC
Trigger: ACAGCACCTGGAGCAAACCCAAACAACGCACAAGTG...CTCCAGAATGTTCTCCACACAATACCTGGAGCTCTCAACCTTTCTTGGTTCAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp AGAATTTACTCACTACTTCACAAATTATTTACGTTTGGAATTCTGACGACTGGCTGGCATTGGGAGCGTTaGCGGGCGTGTTCCCCCAGC +
Preference number: 4 (lower is better)
Translates to: RIYSLLHKLFTFGILTTGWHWER*RACSPS
Trigger: GCTGGGGGAACACGCCCGCCAACGCTCCCAATGCCA...GCCAGTCGTCAGAATTCCAAACGTAAATAATTTGTGAAGTAGTGAGTAAATTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR CCA 90 bp TGTGCACGTGTCTCTGTGAGCACATTCACGGTGCATGCACCATTTTTGATGTCTGTCTTTGGAATTAGGTaGACGGAACCCAGATCGATC +
Preference number: 4 (lower is better)
Translates to: CARVSVSTFTVHAPFLMSVFGIR*TEPRSI
Trigger: GATCGATCTGGGTTCCGTCCACCTAATTCCAAAGAC...AGACATCAAAAATGGTGCATGCACCGTGAATGTGCTCACAGAGACACGTGCACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp ACTAAAGCGGTTTTAGAGAAATTGCAGGCAGCAACCCCACCCACTCCCTTTACCGAAGCTGGCTCAGCATaGCAATTTGTTGAGGAGATA +
Preference number: 4 (lower is better)
Translates to: TKAVLEKLQAATPPTPFTEAGSA*QFVEEI
Trigger: TATCTCCTCAACAAATTGCCATGCTGAGCCAGCTTC...GGTAAAGGGAGTGGGTGGGGTTGCTGCCTGCAATTTCTCTAAAACCGCTTTAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp TTAAGGGTTTACATTGCAGGGGGAAATGTACCTCGAGGTATTATTTTGTGTGAGTGTCCAGATGCGGCTTaGGCCCAACAGGATGAGAGG +
Preference number: 4 (lower is better)
Translates to: LRVYIAGGNVPRGIILCECPDAA*AQQDER
Trigger: CCTCTCATCCTGTTGGGCCCAAGCCGCATCTGGACA...CTCACACAAAATAATACCTCGAGGTACATTTCCCCCTGCAATGTAAACCCTTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp CCACACTCGAGACTTGCAGATGCACGTGTGACGGTGCCATTCTTCGTATATGTTACCATATCCAGGTATTaGCCCTTTGGTTTGAAGGTC +
Preference number: 4 (lower is better)
Translates to: PHSRLADARVTVPFFVYVTISRY*PFGLKV
Trigger: GACCTTCAAACCAAAGGGCCAATACCTGGATATGGT...AACATATACGAAGAATGGCACCGTCACACGTGCATCTGCAAGTCTCGAGTGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR CCA 90 bp ACTAAAGCGGTTTTAGAGAAATTGCAGGCAGCAACCCCACCCACTCCCTTTACCACCATATCCAGGTATTaGCCCTTTGGTTTGAAGGTC +
Preference number: 4 (lower is better)
Translates to: TKAVLEKLQAATPPTPFTTISRY*PFGLKV
Trigger: GACCTTCAAACCAAAGGGCCAATACCTGGATATGGT...GGTAAAGGGAGTGGGTGGGGTTGCTGCCTGCAATTTCTCTAAAACCGCTTTAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp CTCTCCACACTCGAGACTTGCAGATGCACGTGTGACGGTGCCATTCTTCGTATACATTTTTGTGCATATTaGCTTCCTGTGTGGCTACAG +
Preference number: 4 (lower is better)
Translates to: LSTLETCRCTCDGAILRIHFCAY*LPVWLQ
Trigger: CTGTAGCCACACAGGAAGCCAATATGCACAAAAATG...TATACGAAGAATGGCACCGTCACACGTGCATCTGCAAGTCTCGAGTGTGGAGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR CCA 90 bp AATTCAGCAGCTGCCAGAATACTCACGGGTGCATCTTCATGCATGTTTGTCTACTCCTGGTTGGAATTCTaGAGGCCAACTGGCATTGCT +
Preference number: 4 (lower is better)
Translates to: NSAAARILTGASSCMFVYSWLEF*RPTGIA
Trigger: AGCAATGCCAGTTGGCCTCCAGAATTCCAACCAGGA...GTAGACAAACATGCATGAAGATGCACCCGTGAGTATTCTGGCAGCTGCTGAATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR CCA 90 bp TCTGAACCAAGAAAGGTTGAGAGCTCCAGGTATTGTGTGGAGAACATTCTGGAGTCCTGGTTGGAATTCTaGAGGCCAACTGGCATTGCT +
Preference number: 4 (lower is better)
Translates to: SEPRKVESSRYCVENILESWLEF*RPTGIA
Trigger: AGCAATGCCAGTTGGCCTCCAGAATTCCAACCAGGA...CTCCAGAATGTTCTCCACACAATACCTGGAGCTCTCAACCTTTCTTGGTTCAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp GGATTTTTGCTGTACCTTCCTGTTACCTGTTTGTGTGCAAAGTTGGAAAGCTGCCATGGCACTCCTGGTTaGAATTCTGGAGGCCAACTG +
Preference number: 4 (lower is better)
Translates to: GFLLYLPVTCLCAKLESCHGTPG*NSGGQL
Trigger: CAGTTGGCCTCCAGAATTCCAACCAGGAGTGCCATG...GCAGCTTTCCAACTTTGCACACAAACAGGTAACAGGAAGGTACAGCAAAAATCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp TCTGAACCAAGAAAGGTTGAGAGCTCCAGGTATTGTGTGGAGAACATTCTGGAGTTTCCATGGCACTCCTaGTTGGAATTCTGGAGGCCA +
Preference number: 4 (lower is better)
Translates to: SEPRKVESSRYCVENILEFPWHS*LEFWRP
Trigger: TGGCCTCCAGAATTCCAACCAGGAGTGCCATGGAAA...CTCCAGAATGTTCTCCACACAATACCTGGAGCTCTCAACCTTTCTTGGTTCAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp ACTAAAGCGGTTTTAGAGAAATTGCAGGCAGCAACCCCACCCACTCCCTTTACCTTATCCCGCAGCAGTTaGTGGTCAGTATCTACAATG +
Preference number: 4 (lower is better)
Translates to: TKAVLEKLQAATPPTPFTLSRSS*WSVSTM
Trigger: CATTGTAGATACTGACCACCAACTGCTGCGGGATAA...GGTAAAGGGAGTGGGTGGGGTTGCTGCCTGCAATTTCTCTAAAACCGCTTTAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp ACTTCACAAATTATTTACGTTTGGAATTCTGACGACTGGCCTCTGATATATACAGGTCAGACCAGGAGGTaGGCGGGGCAGCGGTGTAGT +
Preference number: 4 (lower is better)
Translates to: TSQIIYVWNSDDWPLIYTGQTRR*AGQRCS
Trigger: ACTACACCGCTGCCCCGCCCACCTCCTGGTCTGACC...TGTATATATCAGAGGCCAGTCGTCAGAATTCCAAACGTAAATAATTTGTGAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR CCA 90 bp TGTGCACGTGTCTCTGTGAGCACATTCACGGTGCATGCACCATTTTTGATGTCTTGGGTTAGATTCAGATaGAATGTCAGCAGTGGGCCA +
Preference number: 4 (lower is better)
Translates to: CARVSVSTFTVHAPFLMSWVRFR*NVSSGP
Trigger: TGGCCCACTGCTGACATTCCATCTGAATCTAACCCA...AGACATCAAAAATGGTGCATGCACCGTGAATGTGCTCACAGAGACACGTGCACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp TTAAGGGTTTACATTGCAGGGGGAAATGTACCTCGAGGTATTATTTTGTGTGAGATGTGCAGTGCAGTTTaGGCCTTGGCCGCCTCCTGT +
Preference number: 4 (lower is better)
Translates to: LRVYIAGGNVPRGIILCEMCSAV*ALAASC
Trigger: ACAGGAGGCGGCCAAGGCCCAAACTGCACTGCACAT...CTCACACAAAATAATACCTCGAGGTACATTTCCCCCTGCAATGTAAACCCTTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp ACTTTCAGGTCAGCACGAGTGAAGCGTGGTTTCCTGAGCTTGAAGGGCTCTGAACTTAATGCAGCCCAATaGAGTTGCTTTAGTAGCAGT +
Preference number: 4 (lower is better)
Translates to: TFRSARVKRGFLSLKGSELNAAQ*SCFSSS
Trigger: ACTGCTACTAAAGCAACTCCATTGGGCTGCATTAAG...TTCAGAGCCCTTCAAGCTCAGGAAACCACGCTTCACTCGTGCTGACCTGAAAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp ACTAAAGCGGTTTTAGAGAAATTGCAGGCAGCAACCCCACCCACTCCCTTTACCTGGGCAGGTATTTGCTaGTACAAAATGTCGGCACTT +
Preference number: 4 (lower is better)
Translates to: TKAVLEKLQAATPPTPFTWAGIC*YKMSAL
Trigger: AAGTGCCGACATTTTGTACCAGCAAATACCTGCCCA...GGTAAAGGGAGTGGGTGGGGTTGCTGCCTGCAATTTCTCTAAAACCGCTTTAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp CAAAGGGTAAAAGCGTGCTGCCCGCTCTGCACACGGCAGAAGCTGGAAAATGCCGGTCAAAATGGAATCTaGCTGTTAACCTTACAAAAA +
Preference number: 4 (lower is better)
Translates to: QRVKACCPLCTRQKLENAGQNGI*LLTLQK
Trigger: TTTTTGTAAGGTTAACAGCCAGATTCCATTTTGACC...GGCATTTTCCAGCTTCTGCCGTGTGCAGAGCGGGCAGCACGCTTTTACCCTTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp AACTTTTACAGCCACCCCTCTGGGAGTTGTACACACCTTTCAGTAGCCGAAGGGTGTTTCTTGACTGTATaGACTCCCTGTACTTGCAGA +
Preference number: 4 (lower is better)
Translates to: NFYSHPSGSCTHLSVAEGCFLTV*TPCTCR
Trigger: TCTGCAAGTACAGGGAGTCCATACAGTCAAGAAACA...CCCTTCGGCTACTGAAAGGTGTGTACAACTCCCAGAGGGGTGGCTGTAAAAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp TCTGAACCAAGAAAGGTTGAGAGCTCCAGGTATTGTGTGGAGAACATTCTGGAGTTACAGCCACCCCTCTaGGAGTTGTACACACCTTTC +
Preference number: 4 (lower is better)
Translates to: SEPRKVESSRYCVENILELQPPL*ELYTPF
Trigger: GAAAGGTGTGTACAACTCCCAGAGGGGTGGCTGTAA...CTCCAGAATGTTCTCCACACAATACCTGGAGCTCTCAACCTTTCTTGGTTCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp AACTTTTACAGCCACCCCTCTGGGAGTTGTACACACCTTTCAGTAGCCGAAGGGCACCTTTCCCATTTTTaGCGAACACACATAGGATGT +
Preference number: 4 (lower is better)
Translates to: NFYSHPSGSCTHLSVAEGHLSHF*RTHIGC
Trigger: ACATCCTATGTGTGTTCGCCAAAAATGGGAAAGGTG...CCCTTCGGCTACTGAAAGGTGTGTACAACTCCCAGAGGGGTGGCTGTAAAAGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp TTAAGGGTTTACATTGCAGGGGGAAATGTACCTCGAGGTATTATTTTGTGTGAGGCTCTTGGACTAACGTaGGTCTGCGTCGCCTGGGTA +
Preference number: 4 (lower is better)
Translates to: LRVYIAGGNVPRGIILCEALGLT*VCVAWV
Trigger: TACCCAGGCGACGCAGACCCACGTTAGTCCAAGAGC...CTCACACAAAATAATACCTCGAGGTACATTTCCCCCTGCAATGTAAACCCTTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp ACTAAAGCGGTTTTAGAGAAATTGCAGGCAGCAACCCCACCCACTCCCTTTACCGCACACGGCAGAAGCTaGAAAATGCCTTGTTTACAT +
Preference number: 4 (lower is better)
Translates to: TKAVLEKLQAATPPTPFTAHGRS*KMPCLH
Trigger: ATGTAAACAAGGCATTTTCCAGCTTCTGCCGTGTGC...GGTAAAGGGAGTGGGTGGGGTTGCTGCCTGCAATTTCTCTAAAACCGCTTTAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp TCCCTAATGACTAAAGCTGACCGTCTGTTTGTTTGTATCCAACGGATAGCTTCTGATGTGACGCCCATGTaGGAATGTAATGGCCGCCTC +
Preference number: 4 (lower is better)
Translates to: SLMTKADRLFVCIQRIASDVTPM*ECNGRL
Trigger: GAGGCGGCCATTACATTCCCACATGGGCGTCACATC...AGAAGCTATCCGTTGGATACAAACAAACAGACGGTCAGCTTTAGTCATTAGGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp GGATTTTTGCTGTACCTTCCTGTTACCTGTTTGTGTGCAAAGTTGGAAAGCTGCAGCACGAGTGAAGCGTaGTTTCCTGAGCTTGAAGGG +
Preference number: 4 (lower is better)
Translates to: GFLLYLPVTCLCAKLESCSTSEA*FPELEG
Trigger: CCCTTCAAGCTCAGGAAACCACGCTTCACTCGTGCT...GCAGCTTTCCAACTTTGCACACAAACAGGTAACAGGAAGGTACAGCAAAAATCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp ACTAAAGCGGTTTTAGAGAAATTGCAGGCAGCAACCCCACCCACTCCCTTTACCAGGGGATGGATCTGCTaGAAGAGAGAAATTCAGACA +
Preference number: 4 (lower is better)
Translates to: TKAVLEKLQAATPPTPFTRGWIC*KREIQT
Trigger: TGTCTGAATTTCTCTCTTCCAGCAGATCCATCCCCT...GGTAAAGGGAGTGGGTGGGGTTGCTGCCTGCAATTTCTCTAAAACCGCTTTAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp CCCCTGTCTCCTCTCCCAAGTCCCAGAATCTCTTCCACTCAACTCTACACTGTGAAAGTGACAAGGCTATaGATTCTACAGTGCAAACCA +
Preference number: 4 (lower is better)
Translates to: PLSPLPSPRISSTQLYTVKVTRL*ILQCKP
Trigger: TGGTTTGCACTGTAGAATCCATAGCCTTGTCACTTT...CACAGTGTAGAGTTGAGTGGAAGAGATTCTGGGACTTGGGAGAGGAGACAGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp CACACACATGTGCGTCCCCCTTGCTCAGGATGTCTGGGTGTATGTACGAAGGCAAAATCAGAAGGTGGGTaGATAATATGCATGCACTTA +
Preference number: 4 (lower is better)
Translates to: HTHVRPPCSGCLGVCTKAKSEGG*IICMHL
Trigger: TAAGTGCATGCATATTATCCACCCACCTTCTGATTT...TGCCTTCGTACATACACCCAGACATCCTGAGCAAGGGGGACGCACATGTGTGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp ACTAAAGCGGTTTTAGAGAAATTGCAGGCAGCAACCCCACCCACTCCCTTTACCAGCCCCCTAGGATTATaGAACCCAAAGCAGCATTTA +
Preference number: 4 (lower is better)
Translates to: TKAVLEKLQAATPPTPFTSPLGL*NPKQHL
Trigger: TAAATGCTGCTTTGGGTTCCATAATCCTAGGGGGCT...GGTAAAGGGAGTGGGTGGGGTTGCTGCCTGCAATTTCTCTAAAACCGCTTTAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp ACTAAAGCGGTTTTAGAGAAATTGCAGGCAGCAACCCCACCCACTCCCTTTACCCTCCCGAGCCCCAAGTaGAATTTGCATAATTTGAAG +
Preference number: 4 (lower is better)
Translates to: TKAVLEKLQAATPPTPFTLPSPK*NLHNLK
Trigger: CTTCAAATTATGCAAATTCCACTTGGGGCTCGGGAG...GGTAAAGGGAGTGGGTGGGGTTGCTGCCTGCAATTTCTCTAAAACCGCTTTAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp CTCTCCACACTCGAGACTTGCAGATGCACGTGTGACGGTGCCATTCTTCGTATAAGATGGGTTGCTATTTaGGTTAAAGTTGCTGAAGCC +
Preference number: 4 (lower is better)
Translates to: LSTLETCRCTCDGAILRIRWVAI*VKVAEA
Trigger: GGCTTCAGCAACTTTAACCCAAATAGCAACCCATCT...TATACGAAGAATGGCACCGTCACACGTGCATCTGCAAGTCTCGAGTGTGGAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR CCA 90 bp TGTGCACGTGTCTCTGTGAGCACATTCACGGTGCATGCACCATTTTTGATGTCTTGCTGGCCAGGCAGATaGGTTGCTATTTGGGTTAAA +
Preference number: 4 (lower is better)
Translates to: CARVSVSTFTVHAPFLMSCWPGR*VAIWVK
Trigger: TTTAACCCAAATAGCAACCCATCTGCCTGGCCAGCA...AGACATCAAAAATGGTGCATGCACCGTGAATGTGCTCACAGAGACACGTGCACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp GGATTTTTGCTGTACCTTCCTGTTACCTGTTTGTGTGCAAAGTTGGAAAGCTGCCTAGAAGTTCCTTCTTaGACCAGTGCTGGCCAGGCA +
Preference number: 4 (lower is better)
Translates to: GFLLYLPVTCLCAKLESCLEVPS*TSAGQA
Trigger: TGCCTGGCCAGCACTGGTCCAAGAAGGAACTTCTAG...GCAGCTTTCCAACTTTGCACACAAACAGGTAACAGGAAGGTACAGCAAAAATCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp AATTCAGCAGCTGCCAGAATACTCACGGGTGCATCTTCATGCATGTTTGTCTACTTGACTGCTGTTCCCTaGATGTCTGACCTACTGTGC +
Preference number: 4 (lower is better)
Translates to: NSAAARILTGASSCMFVYLTAVP*MSDLLC
Trigger: GCACAGTAGGTCAGACATCCAGGGAACAGCAGTCAA...GTAGACAAACATGCATGAAGATGCACCCGTGAGTATTCTGGCAGCTGCTGAATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR CCA 90 bp AATGAAGCTGAAGGAATCGAGTGGGAGGGACTGTTCTCCTCTTTGGGGGAGCTCAGAATTTGGTTGGTTTaGACCACTCCATTCTCCAAT +
Preference number: 4 (lower is better)
Translates to: NEAEGIEWEGLFSSLGELRIWLV*TTPFSN
Trigger: ATTGGAGAATGGAGTGGTCCAAACCAACCAAATTCT...GAGCTCCCCCAAAGAGGAGAACAGTCCCTCCCACTCGATTCCTTCAGCTTCATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp ACTTTCAGGTCAGCACGAGTGAAGCGTGGTTTCCTGAGCTTGAAGGGCTCTGAAGTGCTAGAATTTGGTTaGTTTGGACCACTCCATTCT +
Preference number: 4 (lower is better)
Translates to: TFRSARVKRGFLSLKGSEVLEFG*FGPLHS
Trigger: AGAATGGAGTGGTCCAAACCAACCAAATTCTAGCAC...TTCAGAGCCCTTCAAGCTCAGGAAACCACGCTTCACTCGTGCTGACCTGAAAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp GGATTTTTGCTGTACCTTCCTGTTACCTGTTTGTGTGCAAAGTTGGAAAGCTGCTTTCCCCTCAGGCCTTaGCACCTCTTCAATGTCCCA +
Preference number: 4 (lower is better)
Translates to: GFLLYLPVTCLCAKLESCFPLRP*HLFNVP
Trigger: TGGGACATTGAAGAGGTGCCAAGGCCTGAGGGGAAA...GCAGCTTTCCAACTTTGCACACAAACAGGTAACAGGAAGGTACAGCAAAAATCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp TCCCTAATGACTAAAGCTGACCGTCTGTTTGTTTGTATCCAACGGATAGCTTCTTGGTTCTCGAGGTGCTaGGCCCCCTTGGGAATTCTT +
Preference number: 4 (lower is better)
Translates to: SLMTKADRLFVCIQRIASWFSRC*APLGIL
Trigger: AAGAATTCCCAAGGGGGCCCAGCACCTCGAGAACCA...AGAAGCTATCCGTTGGATACAAACAAACAGACGGTCAGCTTTAGTCATTAGGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp TTAAGGGTTTACATTGCAGGGGGAAATGTACCTCGAGGTATTATTTTGTGTGAGCATTGTTGCCACCATTaGCTGGTGGCGATGGAGAGC +
Preference number: 4 (lower is better)
Translates to: LRVYIAGGNVPRGIILCEHCCHH*LVAMES
Trigger: GCTCTCCATCGCCACCAGTCAATGGTGGCAACAATG...CTCACACAAAATAATACCTCGAGGTACATTTCCCCCTGCAATGTAAACCCTTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp TCTGAACCAAGAAAGGTTGAGAGCTCCAGGTATTGTGTGGAGAACATTCTGGAGTGTTGGGAAACTGCTTaGGCATTGAGGCAGAAACCT +
Preference number: 4 (lower is better)
Translates to: SEPRKVESSRYCVENILECWETA*ALRQKP
Trigger: AGGTTTCTGCCTCAATGCTCAAGCAGTTTCCCAACA...CTCCAGAATGTTCTCCACACAATACCTGGAGCTCTCAACCTTTCTTGGTTCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp TGGAATTCTGACGACTGGCCTCTGATATATACAGGACAATCCAAGCTTTGGTGGGTGTGTCACCAGGGATaGTATCAAACTGGTTGTACG +
Preference number: 4 (lower is better)
Translates to: WNSDDWPLIYTGQSKLWWVCHQG*YQTGCT
Trigger: CGTACAACCAGTTTGATATCATCCCTGGTGACACAC...CCACCAAAGCTTGGATTGTCCTGTATATATCAGAGGCCAGTCGTCAGAATTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR TCA 90 bp ACTAAAGCGGTTTTAGAGAAATTGCAGGCAGCAACCCCACCCACTCCCTTTACCATCTGGGGACCATGTTaGTTTGTAATCAGGGAACTT +
Preference number: 4 (lower is better)
Translates to: TKAVLEKLQAATPPTPFTIWGPC*FVIREL
Trigger: AAGTTCCCTGATTACAAATCAACATGGTCCCCAGAT...GGTAAAGGGAGTGGGTGGGGTTGCTGCCTGCAATTTCTCTAAAACCGCTTTAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp AATTCAGCAGCTGCCAGAATACTCACGGGTGCATCTTCATGCATGTTTGTCTACATCTTGTTGGAGAGATaGGTGGGGTTGTGTCCTATG +
Preference number: 4 (lower is better)
Translates to: NSAAARILTGASSCMFVYILLER*VGLCPM
Trigger: CATAGGACACAACCCCACTCATCTCTCCAACAAGAT...GTAGACAAACATGCATGAAGATGCACCCGTGAGTATTCTGGCAGCTGCTGAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR TCA 90 bp TCCCTAATGACTAAAGCTGACCGTCTGTTTGTTTGTATCCAACGGATAGCTTCTGTAACTAGGACGAACTaGGCCACCATCACTCCAGGT +
Preference number: 4 (lower is better)
Translates to: SLMTKADRLFVCIQRIASVTRTN*ATITPG
Trigger: ACCTGGAGTGATGGTGGCTCAGTTCGTCCTAGTTAC...AGAAGCTATCCGTTGGATACAAACAAACAGACGGTCAGCTTTAGTCATTAGGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp TGTGCACGTGTCTCTGTGAGCACATTCACGGTGCATGCACCATTTTTGATGTCTCCCCAACAATTCTTTTaGATTTCCCTCCCTCCCAAA +
Preference number: 4 (lower is better)
Translates to: CARVSVSTFTVHAPFLMSPQQFF*ISLPPK
Trigger: TTTGGGAGGGAGGGAAATTCAAAAGAATTGTTGGGG...AGACATCAAAAATGGTGCATGCACCGTGAATGTGCTCACAGAGACACGTGCACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp GGGTTTATCTTAAAGATGGGGGCGAAGGGGGTGTCTGCAAAGAAGCAATTCAAAGATACTGGATCTAATTaGCAGCAGAGGTCCTCTGTC +
Preference number: 4 (lower is better)
Translates to: GFILKMGAKGVSAKKQFKDTGSN*QQRSSV
Trigger: GACAGAGGACCTCTGCTGTCAATTAGATCCAGTATC...TTTGAATTGCTTCTTTGCAGACACCCCCTTCGCCCCCATCTTTAAGATAAACCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp CCCCTGTCTCCTCTCCCAAGTCCCAGAATCTCTTCCACTCAACTCTACACTGTGATGAGGTCTGAAGACTaGCAATTCATTGTATACACA +
Preference number: 4 (lower is better)
Translates to: PLSPLPSPRISSTQLYTVMRSED*QFIVYT
Trigger: TGTGTATACAATGAATTGTCAGTCTTCAGACCTCAT...CACAGTGTAGAGTTGAGTGGAAGAGATTCTGGGACTTGGGAGAGGAGACAGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp ACTAAAGCGGTTTTAGAGAAATTGCAGGCAGCAACCCCACCCACTCCCTTTACCATAAAGAAGCGACGATaGCCACATGTGGGACTTTTT +
Preference number: 4 (lower is better)
Translates to: TKAVLEKLQAATPPTPFTIKKRR*PHVGLF
Trigger: AAAAAGTCCCACATGTGGTCATCGTCGCTTCTTTAT...GGTAAAGGGAGTGGGTGGGGTTGCTGCCTGCAATTTCTCTAAAACCGCTTTAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp ACTTTCAGGTCAGCACGAGTGAAGCGTGGTTTCCTGAGCTTGAAGGGCTCTGAACTCGTTACAGTACTGTaGACGTCAACAAGAAGAATT +
Preference number: 4 (lower is better)
Translates to: TFRSARVKRGFLSLKGSELVTVL*TSTRRI
Trigger: AATTCTTCTTGTTGACGTTCACAGTACTGTAACGAG...TTCAGAGCCCTTCAAGCTCAGGAAACCACGCTTCACTCGTGCTGACCTGAAAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp ACTTTCAGGTCAGCACGAGTGAAGCGTGGTTTCCTGAGCTTGAAGGGCTCTGAAAGAAGCAATTCAAAATaGTCCATTCCAACCCTGCTT +
Preference number: 4 (lower is better)
Translates to: TFRSARVKRGFLSLKGSERSNSK*SIPTLL
Trigger: AAGCAGGGTTGGAATGGATCATTTTGAATTGCTTCT...TTCAGAGCCCTTCAAGCTCAGGAAACCACGCTTCACTCGTGCTGACCTGAAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp ACTAAAGCGGTTTTAGAGAAATTGCAGGCAGCAACCCCACCCACTCCCTTTACCGTAGAGTTGGAAGATTaGACAGATTTAGCCTTAGGG +
Preference number: 4 (lower is better)
Translates to: TKAVLEKLQAATPPTPFTVELED*TDLALG
Trigger: CCCTAAGGCTAAATCTGTTCAATCTTCCAACTCTAC...GGTAAAGGGAGTGGGTGGGGTTGCTGCCTGCAATTTCTCTAAAACCGCTTTAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp TGGAATTCTGACGACTGGCCTCTGATATATACAGGACAATCCAAGCTTTGGTGGGGTCCAATTCTATCCTaGCCACTCACATTCCTCCAA +
Preference number: 4 (lower is better)
Translates to: WNSDDWPLIYTGQSKLWWGPILS*PLTFLQ
Trigger: TTGGAGGAATGTGAGTGGTCAGGATAGAATTGGACC...CCACCAAAGCTTGGATTGTCCTGTATATATCAGAGGCCAGTCGTCAGAATTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR TCA 90 bp TCTGACGACTGGCCTCTGATATATACAGGACAATCCAAGCTTTGGTGGAAAAGATGTTCCCTGGATGTCTaGCCTACTGTGCTAACCTGT +
Preference number: 4 (lower is better)
Translates to: SDDWPLIYTGQSKLWWKRCSLDV*PTVLTC
Trigger: ACAGGTTAGCACAGTAGGTCAGACATCCAGGGAACA...TCTTTTCCACCAAAGCTTGGATTGTCCTGTATATATCAGAGGCCAGTCGTCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR TCA 90 bp GGGTTTATCTTAAAGATGGGGGCGAAGGGGGTGTCTGCAAAGAAGCAATTCAAAGACCCAGTTGATTTCTaGACAGAAGCTCCTTTCCAG +
Preference number: 4 (lower is better)
Translates to: GFILKMGAKGVSAKKQFKDPVDF*TEAPFQ
Trigger: CTGGAAAGGAGCTTCTGTTCAGAAATCAACTGGGTC...TTTGAATTGCTTCTTTGCAGACACCCCCTTCGCCCCCATCTTTAAGATAAACCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp TCTGAACCAAGAAAGGTTGAGAGCTCCAGGTATTGTGTGGAGAACATTCTGGAGTGTTTCCATTCTCCCTaGGAGACCCCAGATGTCATT +
Preference number: 4 (lower is better)
Translates to: SEPRKVESSRYCVENILECFHSP*ETPDVI
Trigger: AATGACATCTGGGGTCTCTCAGGGAGAATGGAAACA...CTCCAGAATGTTCTCCACACAATACCTGGAGCTCTCAACCTTTCTTGGTTCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp TCTGAACCAAGAAAGGTTGAGAGCTCCAGGTATTGTGTGGAGAACATTCTGGAGTTGCTTCCAGTGCTTTaGCCTCCAACTTCACTTCCT +
Preference number: 4 (lower is better)
Translates to: SEPRKVESSRYCVENILELLPVL*PPTSLP
Trigger: AGGAAGTGAAGTTGGAGGTCAAAGCACTGGAAGCAA...CTCCAGAATGTTCTCCACACAATACCTGGAGCTCTCAACCTTTCTTGGTTCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp TTAAGGGTTTACATTGCAGGGGGAAATGTACCTCGAGGTATTATTTTGTGTGAGGTCTGCAAGACAGCCTaGCAATCAGGATGTGTGGGC +
Preference number: 4 (lower is better)
Translates to: LRVYIAGGNVPRGIILCEVCKTA*QSGCVG
Trigger: GCCCACACATCCTGATTGTCAGGCTGTCTTGCAGAC...CTCACACAAAATAATACCTCGAGGTACATTTCCCCCTGCAATGTAAACCCTTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp TCCCTAATGACTAAAGCTGACCGTCTGTTTGTTTGTATCCAACGGATAGCTTCTGTGTCCTGCTTAATTTaGGTTTGGCCCCAGCCAGTG +
Preference number: 4 (lower is better)
Translates to: SLMTKADRLFVCIQRIASVSCLI*VWPQPV
Trigger: CACTGGCTGGGGCCAAACTCAAATTAAGCAGGACAC...AGAAGCTATCCGTTGGATACAAACAAACAGACGGTCAGCTTTAGTCATTAGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp TGGAATTCTGACGACTGGCCTCTGATATATACAGGACAATCCAAGCTTTGGTGGCATCCAGACTTCATTTaGTTGCTTTGGCTGGGTGCA +
Preference number: 4 (lower is better)
Translates to: WNSDDWPLIYTGQSKLWWHPDFI*LLWLGA
Trigger: TGCACCCAGCCAAAGCAATCAAATGAAGTCTGGATG...CCACCAAAGCTTGGATTGTCCTGTATATATCAGAGGCCAGTCGTCAGAATTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR TCA 90 bp TCTGGTGCATCTTTAATTCAGCAGCTGCCAGAATACTCACGGGTGCATCTTCATCTGACGACTGGCCTCTaGTATATACAGGACAATCCA +
Preference number: 4 (lower is better)
Translates to: SGASLIQQLPEYSRVHLHLTTGL*YIQDNP
Trigger: TGGATTGTCCTGTATATATCAGAGGCCAGTCGTCAG...ATGAAGATGCACCCGTGAGTATTCTGGCAGCTGCTGAATTAAAGATGCACCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR TCA 90 bp GGATTTTTGCTGTACCTTCCTGTTACCTGTTTGTGTGCAAAGTTGGAAAGCTGCCCAAGGCACCCATCTTaGTTGGAGAAAGGCAAAGTC +
Preference number: 4 (lower is better)
Translates to: GFLLYLPVTCLCAKLESCPRHPS*LEKGKV
Trigger: GACTTTGCCTTTCTCCAATCAAGATGGGTGCCTTGG...GCAGCTTTCCAACTTTGCACACAAACAGGTAACAGGAAGGTACAGCAAAAATCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000454349.7
CDS-3UTR GCA 90 bp GGATTTTTGCTGTACCTTCCTGTTACCTGTTTGTGTGCAAAGTTGGAAAGCTGCTTGTCCGTTCGGCACTaGCACCCTTTTGGCATTGTT +
Preference number: 4 (lower is better)
Translates to: GFLLYLPVTCLCAKLESCLSVRH*HPFGIV
Trigger: AACAATGCCAAAAGGGTGGCAGTGCCGAACGGACAA...GCAGCTTTCCAACTTTGCACACAAACAGGTAACAGGAAGGTACAGCAAAAATCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp TCTGAACCAAGAAAGGTTGAGAGCTCCAGGTATTGTGTGGAGAACATTCTGGAGTTCTGTAACAACTGCTaGTGTTGCTGCTGCTGCAAG +
Preference number: 4 (lower is better)
Translates to: SEPRKVESSRYCVENILEFCNNC*CCCCCK
Trigger: CTTGCAGCAGCAGCAACAGCAGCAGTTGTTACAGAA...CTCCAGAATGTTCTCCACACAATACCTGGAGCTCTCAACCTTTCTTGGTTCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp TCCCTAATGACTAAAGCTGACCGTCTGTTTGTTTGTATCCAACGGATAGCTTCTATTCGAGCCAGCTGCTaGTCTTGCTGTTGGCGTACA +
Preference number: 4 (lower is better)
Translates to: SLMTKADRLFVCIQRIASIRASC*SCCWRT
Trigger: TGTACGCCAACAGCAAGAGCAGCAGCTGGCTCGAAT...AGAAGCTATCCGTTGGATACAAACAAACAGACGGTCAGCTTTAGTCATTAGGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp TTAAGGGTTTACATTGCAGGGGGAAATGTACCTCGAGGTATTATTTTGTGTGAGACCATTCGAGCCAGCTaGTGCTCTTGCTGTTGGCGT +
Preference number: 4 (lower is better)
Translates to: LRVYIAGGNVPRGIILCETIRAS*CSCCWR
Trigger: ACGCCAACAGCAAGAGCAGCAGCTGGCTCGAATGGT...CTCACACAAAATAATACCTCGAGGTACATTTCCCCCTGCAATGTAAACCCTTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp TCCCTAATGACTAAAGCTGACCGTCTGTTTGTTTGTATCCAACGGATAGCTTCTGTAAAGGAGCAGGGCTaGCCATCCTATGGGGATCTT +
Preference number: 4 (lower is better)
Translates to: SLMTKADRLFVCIQRIASVKEQG*PSYGDL
Trigger: AAGATCCCCATAGGATGGGCAGCCCTGCTCCTTTAC...AGAAGCTATCCGTTGGATACAAACAAACAGACGGTCAGCTTTAGTCATTAGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp GGGTTTATCTTAAAGATGGGGGCGAAGGGGGTGTCTGCAAAGAAGCAATTCAAAAGAGACAGAGAAGGATaGACGCGAATGCACATGAAC +
Preference number: 4 (lower is better)
Translates to: GFILKMGAKGVSAKKQFKRDREG*TRMHMN
Trigger: GTTCATGTGCATTCGCGTGCATCCTTCTCTGTCTCT...TTTGAATTGCTTCTTTGCAGACACCCCCTTCGCCCCCATCTTTAAGATAAACCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp GGGTTTATCTTAAAGATGGGGGCGAAGGGGGTGTCTGCAAAGAAGCAATTCAAATTTTGGACTTGGCAGTaGTCCACTCTACTGCTAGGT +
Preference number: 4 (lower is better)
Translates to: GFILKMGAKGVSAKKQFKFWTWQ*STLLLG
Trigger: ACCTAGCAGTAGAGTGGAGCACTGCCAAGTCCAAAA...TTTGAATTGCTTCTTTGCAGACACCCCCTTCGCCCCCATCTTTAAGATAAACCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp TCTGAACCAAGAAAGGTTGAGAGCTCCAGGTATTGTGTGGAGAACATTCTGGAGTTTTGGACTTGGCAGTaGTCCACTCTACTGCTAGGT +
Preference number: 4 (lower is better)
Translates to: SEPRKVESSRYCVENILEFWTWQ*STLLLG
Trigger: ACCTAGCAGTAGAGTGGAGCACTGCCAAGTCCAAAA...CTCCAGAATGTTCTCCACACAATACCTGGAGCTCTCAACCTTTCTTGGTTCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp GGGTTTATCTTAAAGATGGGGGCGAAGGGGGTGTCTGCAAAGAAGCAATTCAAAAAGAAGCTGTGGTCATaGTTGGGAATTCTGACCCCT +
Preference number: 4 (lower is better)
Translates to: GFILKMGAKGVSAKKQFKKKLWS*LGILTP
Trigger: AGGGGTCAGAATTCCCAAGCATGACCACAGCTTCTT...TTTGAATTGCTTCTTTGCAGACACCCCCTTCGCCCCCATCTTTAAGATAAACCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp AACTTTTACAGCCACCCCTCTGGGAGTTGTACACACCTTTCAGTAGCCGAAGGGACCCCCTTTGCAGAATaGATAGTTACAATTCACCTT +
Preference number: 4 (lower is better)
Translates to: NFYSHPSGSCTHLSVAEGTPFAE*IVTIHL
Trigger: AAGGTGAATTGTAACTATGCATTCTGCAAAGGGGGT...CCCTTCGGCTACTGAAAGGTGTGTACAACTCCCAGAGGGGTGGCTGTAAAAGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp GGGTTTATCTTAAAGATGGGGGCGAAGGGGGTGTCTGCAAAGAAGCAATTCAAATCCCCCGACCTCCTCTaGTCTTTCTTCTTAAACATG +
Preference number: 4 (lower is better)
Translates to: GFILKMGAKGVSAKKQFKSPDLL*SFFLNM
Trigger: CATGTTTAAGAAGAAAGAGCAGAGGAGGTCGGGGGA...TTTGAATTGCTTCTTTGCAGACACCCCCTTCGCCCCCATCTTTAAGATAAACCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp GGGTTTATCTTAAAGATGGGGGCGAAGGGGGTGTCTGCAAAGAAGCAATTCAAATTTGAGTCGAAGTCTTaGTCTGTTGCCCACACTGGA +
Preference number: 4 (lower is better)
Translates to: GFILKMGAKGVSAKKQFKFESKS*SVAHTG
Trigger: TCCAGTGTGGGCAACAGAGCAAGACTTCGACTCAAA...TTTGAATTGCTTCTTTGCAGACACCCCCTTCGCCCCCATCTTTAAGATAAACCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp TGTGCACGTGTCTCTGTGAGCACATTCACGGTGCATGCACCATTTTTGATGTCTTTTGATGCCCTTTTCTaGACCTTCTGTCTAAAGGGG +
Preference number: 4 (lower is better)
Translates to: CARVSVSTFTVHAPFLMSFDALF*TFCLKG
Trigger: CCCCTTTAGACAGAAGGTGCAGAAAAGGGCATCAAA...AGACATCAAAAATGGTGCATGCACCGTGAATGTGCTCACAGAGACACGTGCACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp ACTAAAGCGGTTTTAGAGAAATTGCAGGCAGCAACCCCACCCACTCCCTTTACCCTTTTGATTGTCCCATaGTCCAGTGCTAGAATTTGG +
Preference number: 4 (lower is better)
Translates to: TKAVLEKLQAATPPTPFTLLIVP*SSARIW
Trigger: CCAAATTCTAGCACTGGAGCATGGGACAATCAAAAG...GGTAAAGGGAGTGGGTGGGGTTGCTGCCTGCAATTTCTCTAAAACCGCTTTAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp CTCTCCACACTCGAGACTTGCAGATGCACGTGTGACGGTGCCATTCTTCGTATAAGACACAGGTTTACTTaGAGAACTTTCCCAATTGCT +
Preference number: 4 (lower is better)
Translates to: LSTLETCRCTCDGAILRIRHRFT*RTFPIA
Trigger: AGCAATTGGGAAAGTTCTGCAAGTAAACCTGTGTCT...TATACGAAGAATGGCACCGTCACACGTGCATCTGCAAGTCTCGAGTGTGGAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR GCA 90 bp TTAAGGGTTTACATTGCAGGGGGAAATGTACCTCGAGGTATTATTTTGTGTGAGGGCTGCTGTGGGGGCTaGTGCTGTTGGTGTTGTTTA +
Preference number: 4 (lower is better)
Translates to: LRVYIAGGNVPRGIILCEGCCGG*CCWCCL
Trigger: TAAACAACACCAACAGCAGCAGCCCCCACAGCAGCC...CTCACACAAAATAATACCTCGAGGTACATTTCCCCCTGCAATGTAAACCCTTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp TTAAGGGTTTACATTGCAGGGGGAAATGTACCTCGAGGTATTATTTTGTGTGAGGTTTGGTTCTCGAGGTaGTGGGCCCCCTTGGGAATT +
Preference number: 4 (lower is better)
Translates to: LRVYIAGGNVPRGIILCEVWFSR*WAPLGI
Trigger: AATTCCCAAGGGGGCCCAGCACCTCGAGAACCAAAC...CTCACACAAAATAATACCTCGAGGTACATTTCCCCCTGCAATGTAAACCCTTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp AATTCAGCAGCTGCCAGAATACTCACGGGTGCATCTTCATGCATGTTTGTCTACACGGGTGCATCTTCATaGATGTTTGTCTACGTGGGT +
Preference number: 4 (lower is better)
Translates to: NSAAARILTGASSCMFVYTGASS*MFVYVG
Trigger: ACCCACGTAGACAAACATGCATGAAGATGCACCCGT...GTAGACAAACATGCATGAAGATGCACCCGTGAGTATTCTGGCAGCTGCTGAATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR GCA 90 bp CCACACTCGAGACTTGCAGATGCACGTGTGACGGTGCCATTCTTCGTATATGTTCAGAATACTCACGGGTaGATCTTCATGCATGTTTGT +
Preference number: 4 (lower is better)
Translates to: PHSRLADARVTVPFFVYVQNTHG*IFMHVC
Trigger: ACAAACATGCATGAAGATGCACCCGTGAGTATTCTG...AACATATACGAAGAATGGCACCGTCACACGTGCATCTGCAAGTCTCGAGTGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR CCA 90 bp GGGTTTATCTTAAAGATGGGGGCGAAGGGGGTGTCTGCAAAGAAGCAATTCAAACCTCCTGTTCCACCTTaGAACTGCTTTCTTCCGATA +
Preference number: 4 (lower is better)
Translates to: GFILKMGAKGVSAKKQFKPPVPP*NCFLPI
Trigger: TATCGGAAGAAAGCAGTTCCAAGGTGGAACAGGAGG...TTTGAATTGCTTCTTTGCAGACACCCCCTTCGCCCCCATCTTTAAGATAAACCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000301923.13
CDS-3UTR CCA 90 bp TGTGCACGTGTCTCTGTGAGCACATTCACGGTGCATGCACCATTTTTGATGTCTGGAAGTACCATTATCTaGAGCAGGTGGTGTGCTTTT +
Preference number: 4 (lower is better)
Translates to: CARVSVSTFTVHAPFLMSGSTII*SRWCAF
Trigger: AAAAGCACACCACCTGCTCCAGATAATGGTACTTCC...AGACATCAAAAATGGTGCATGCACCGTGAATGTGCTCACAGAGACACGTGCACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301923.13
ENST00000454349.7
CDS-3UTR CCA 90 bp TCTGACGACTGGCCTCTGATATATACAGGACAATCCAAGCTTTGGTGGAAAAGAAGGACTGCTTTCATTTaGCTCACCCCAAGCGGAAGT +
Preference number: 4 (lower is better)
Translates to: SDDWPLIYTGQSKLWWKRRTAFI*LTPSGS
Trigger: ACTTCCGCTTGGGGTGAGCCAAATGAAAGCAGTCCT...TCTTTTCCACCAAAGCTTGGATTGTCCTGTATATATCAGAGGCCAGTCGTCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR CCA 90 bp TCCCTAATGACTAAAGCTGACCGTCTGTTTGTTTGTATCCAACGGATAGCTTCTTGTTCCCCCAGCCTGTaGTCGATGCTCCTGTATCAT +
Preference number: 4 (lower is better)
Translates to: SLMTKADRLFVCIQRIASCSPSL*SMLLYH
Trigger: ATGATACAGGAGCATCGACCACAGGCTGGGGGAACA...AGAAGCTATCCGTTGGATACAAACAAACAGACGGTCAGCTTTAGTCATTAGGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301923.13
ENST00000454349.7
CDS-3UTR CCA 90 bp GGGTTTATCTTAAAGATGGGGGCGAAGGGGGTGTCTGCAAAGAAGCAATTCAAAATTGAGGCAGAAACCTaGGGGGAAATAAACTGGGGA +
Preference number: 4 (lower is better)
Translates to: GFILKMGAKGVSAKKQFKIEAET*GEINWG
Trigger: TCCCCAGTTTATTTCCCCCCAGGTTTCTGCCTCAAT...TTTGAATTGCTTCTTTGCAGACACCCCCTTCGCCCCCATCTTTAAGATAAACCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 23 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp GGATTTTTGCTGTACCTTCCTGTTACCTGTTTGTGTGCAAAGTTGGAAAGCTGCAAACTGGGGAATTTGTaGAAGCTGGCTCAGCATGGC +
Preference number: 4 (lower is better)
Translates to: GFLLYLPVTCLCAKLESCKLGNL*KLAQHG
Trigger: GCCATGCTGAGCCAGCTTCCACAAATTCCCCAGTTT...GCAGCTTTCCAACTTTGCACACAAACAGGTAACAGGAAGGTACAGCAAAAATCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp TTAAGGGTTTACATTGCAGGGGGAAATGTACCTCGAGGTATTATTTTGTGTGAGTATTGGCTTCCTGTGTaGCTACAGAGGGCAGCCCCT +
Preference number: 4 (lower is better)
Translates to: LRVYIAGGNVPRGIILCEYWLPV*LQRAAP
Trigger: AGGGGCTGCCCTCTGTAGCCACACAGGAAGCCAATA...CTCACACAAAATAATACCTCGAGGTACATTTCCCCCTGCAATGTAAACCCTTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp TGTGCACGTGTCTCTGTGAGCACATTCACGGTGCATGCACCATTTTTGATGTCTTTGTTGGTGGAGATTTaGCAGGTAACCAGCTATCAC +
Preference number: 4 (lower is better)
Translates to: CARVSVSTFTVHAPFLMSLLVEI*QVTSYH
Trigger: GTGATAGCTGGTTACCTGCCAAATCTCCACCAACAA...AGACATCAAAAATGGTGCATGCACCGTGAATGTGCTCACAGAGACACGTGCACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp GGATTTTTGCTGTACCTTCCTGTTACCTGTTTGTGTGCAAAGTTGGAAAGCTGCTCCTGGTTGGAATTCTaGAGGCCAACTGGCATTGCT +
Preference number: 4 (lower is better)
Translates to: GFLLYLPVTCLCAKLESCSWLEF*RPTGIA
Trigger: AGCAATGCCAGTTGGCCTCCAGAATTCCAACCAGGA...GCAGCTTTCCAACTTTGCACACAAACAGGTAACAGGAAGGTACAGCAAAAATCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp GGGTTTATCTTAAAGATGGGGGCGAAGGGGGTGTCTGCAAAGAAGCAATTCAAATGTTGGAGAGATGAGTaGGGTTGTGTCCTATGGGAT +
Preference number: 4 (lower is better)
Translates to: GFILKMGAKGVSAKKQFKCWRDE*GCVLWD
Trigger: ATCCCATAGGACACAACCCCACTCATCTCTCCAACA...TTTGAATTGCTTCTTTGCAGACACCCCCTTCGCCCCCATCTTTAAGATAAACCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp TCTGAACCAAGAAAGGTTGAGAGCTCCAGGTATTGTGTGGAGAACATTCTGGAGATCAGGGCAGTGCCCTaGGTTAGATTCAGATGGAAT +
Preference number: 4 (lower is better)
Translates to: SEPRKVESSRYCVENILEIRAVP*VRFRWN
Trigger: ATTCCATCTGAATCTAACCCAGGGCACTGCCCTGAT...CTCCAGAATGTTCTCCACACAATACCTGGAGCTCTCAACCTTTCTTGGTTCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp GGATTTTTGCTGTACCTTCCTGTTACCTGTTTGTGTGCAAAGTTGGAAAGCTGCCCTTTCTTTTGTTGCTaGGGTTGTGGGGACAAGGAG +
Preference number: 4 (lower is better)
Translates to: GFLLYLPVTCLCAKLESCPFFCC*GCGDKE
Trigger: CTCCTTGTCCCCACAACCCCAGCAACAAAAGAAAGG...GCAGCTTTCCAACTTTGCACACAAACAGGTAACAGGAAGGTACAGCAAAAATCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp TCCCTAATGACTAAAGCTGACCGTCTGTTTGTTTGTATCCAACGGATAGCTTCTCAGAGGTCCTCTGTCTaGTGTGAGACACCCCTTTCT +
Preference number: 4 (lower is better)
Translates to: SLMTKADRLFVCIQRIASQRSSV*CETPLS
Trigger: AGAAAGGGGTGTCTCACACCAGACAGAGGACCTCTG...AGAAGCTATCCGTTGGATACAAACAAACAGACGGTCAGCTTTAGTCATTAGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp ACTAAAGCGGTTTTAGAGAAATTGCAGGCAGCAACCCCACCCACTCCCTTTACCTGTTTCTTGACTGTATaGACTCCCTGTACTTGCAGA +
Preference number: 4 (lower is better)
Translates to: TKAVLEKLQAATPPTPFTCFLTV*TPCTCR
Trigger: TCTGCAAGTACAGGGAGTCCATACAGTCAAGAAACA...GGTAAAGGGAGTGGGTGGGGTTGCTGCCTGCAATTTCTCTAAAACCGCTTTAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp GGATTTTTGCTGTACCTTCCTGTTACCTGTTTGTGTGCAAAGTTGGAAAGCTGCTTACAGCCACCCCTCTaGGAGTTGTACACACCTTTC +
Preference number: 4 (lower is better)
Translates to: GFLLYLPVTCLCAKLESCLQPPL*ELYTPF
Trigger: GAAAGGTGTGTACAACTCCCAGAGGGGTGGCTGTAA...GCAGCTTTCCAACTTTGCACACAAACAGGTAACAGGAAGGTACAGCAAAAATCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp TTAAGGGTTTACATTGCAGGGGGAAATGTACCTCGAGGTATTATTTTGTGTGAGACCTGCCAGCAACAGTaGCAAGAGGACTCAGAGGTC +
Preference number: 4 (lower is better)
Translates to: LRVYIAGGNVPRGIILCETCQQQ*QEDSEV
Trigger: GACCTCTGAGTCCTCTTGCCACTGTTGCTGGCAGGT...CTCACACAAAATAATACCTCGAGGTACATTTCCCCCTGCAATGTAAACCCTTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp TCTGAACCAAGAAAGGTTGAGAGCTCCAGGTATTGTGTGGAGAACATTCTGGAGGTTCCATTGCTGCACTaGATTAACACTGCACGGCTA +
Preference number: 4 (lower is better)
Translates to: SEPRKVESSRYCVENILEVPLLH*INTARL
Trigger: TAGCCGTGCAGTGTTAATCCAGTGCAGCAATGGAAC...CTCCAGAATGTTCTCCACACAATACCTGGAGCTCTCAACCTTTCTTGGTTCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp ACTTTCAGGTCAGCACGAGTGAAGCGTGGTTTCCTGAGCTTGAAGGGCTCTGAAGGCAATCTAACAGATTaGAACCCTGATAAGATCATG +
Preference number: 4 (lower is better)
Translates to: TFRSARVKRGFLSLKGSEGNLTD*NPDKIM
Trigger: CATGATCTTATCAGGGTTCCAATCTGTTAGATTGCC...TTCAGAGCCCTTCAAGCTCAGGAAACCACGCTTCACTCGTGCTGACCTGAAAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp GGGTTTATCTTAAAGATGGGGGCGAAGGGGGTGTCTGCAAAGAAGCAATTCAAAACAGGGTTTACATACTaGTCTGCTGTCACTGTGTGG +
Preference number: 4 (lower is better)
Translates to: GFILKMGAKGVSAKKQFKTGFTY*SAVTVW
Trigger: CCACACAGTGACAGCAGACCAGTATGTAAACCCTGT...TTTGAATTGCTTCTTTGCAGACACCCCCTTCGCCCCCATCTTTAAGATAAACCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp AACTTTTACAGCCACCCCTCTGGGAGTTGTACACACCTTTCAGTAGCCGAAGGGAAAGTGACAAGGCTATaGATTCTACAGTGCAAACCA +
Preference number: 4 (lower is better)
Translates to: NFYSHPSGSCTHLSVAEGKVTRL*ILQCKP
Trigger: TGGTTTGCACTGTAGAATCCATAGCCTTGTCACTTT...CCCTTCGGCTACTGAAAGGTGTGTACAACTCCCAGAGGGGTGGCTGTAAAAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp TGTGCACGTGTCTCTGTGAGCACATTCACGGTGCATGCACCATTTTTGATGTCTACATGGCTTTCAGGGTaGTTTGCACATCTCCTTACA +
Preference number: 4 (lower is better)
Translates to: CARVSVSTFTVHAPFLMSTWLSG*FAHLLT
Trigger: TGTAAGGAGATGTGCAAACCACCCTGAAAGCCATGT...AGACATCAAAAATGGTGCATGCACCGTGAATGTGCTCACAGAGACACGTGCACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp GGGTTTATCTTAAAGATGGGGGCGAAGGGGGTGTCTGCAAAGAAGCAATTCAAACTTGCAGACTGGCACTaGCTCCCTTTTCCTTTGTTA +
Preference number: 4 (lower is better)
Translates to: GFILKMGAKGVSAKKQFKLADWH*LPFPLL
Trigger: TAACAAAGGAAAAGGGAGCCAGTGCCAGTCTGCAAG...TTTGAATTGCTTCTTTGCAGACACCCCCTTCGCCCCCATCTTTAAGATAAACCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp AACTTTTACAGCCACCCCTCTGGGAGTTGTACACACCTTTCAGTAGCCGAAGGGAGAATTTGGTTGGTTTaGACCACTCCATTCTCCAAT +
Preference number: 4 (lower is better)
Translates to: NFYSHPSGSCTHLSVAEGRIWLV*TTPFSN
Trigger: ATTGGAGAATGGAGTGGTCCAAACCAACCAAATTCT...CCCTTCGGCTACTGAAAGGTGTGTACAACTCCCAGAGGGGTGGCTGTAAAAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp ATATGTTCTGGTGCATCTTTAATTCAGCAGCTGCCAGAATACTCACGGGTGCATCAACTTCACTTCCTGTaGAGCTGGAAGATCTTCCCC +
Preference number: 4 (lower is better)
Translates to: ICSGASLIQQLPEYSRVHQLHFL*SWKIFP
Trigger: GGGGAAGATCTTCCAGCTCCACAGGAAGTGAAGTTG...ATGCACCCGTGAGTATTCTGGCAGCTGCTGAATTAAAGATGCACCAGAACATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR CCA 90 bp GGATTTTTGCTGTACCTTCCTGTTACCTGTTTGTGTGCAAAGTTGGAAAGCTGCCAACTTCACTTCCTGTaGAGCTGGAAGATCTTCCCC +
Preference number: 4 (lower is better)
Translates to: GFLLYLPVTCLCAKLESCQLHFL*SWKIFP
Trigger: GGGGAAGATCTTCCAGCTCCACAGGAAGTGAAGTTG...GCAGCTTTCCAACTTTGCACACAAACAGGTAACAGGAAGGTACAGCAAAAATCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp TCCCTAATGACTAAAGCTGACCGTCTGTTTGTTTGTATCCAACGGATAGCTTCTTGTTTGAGAGCACCCTaGGGTCCAAATCAGTTCGGC +
Preference number: 4 (lower is better)
Translates to: SLMTKADRLFVCIQRIASCLRAP*GPNQFG
Trigger: GCCGAACTGATTTGGACCCCAGGGTGCTCTCAAACA...AGAAGCTATCCGTTGGATACAAACAAACAGACGGTCAGCTTTAGTCATTAGGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp TTAAGGGTTTACATTGCAGGGGGAAATGTACCTCGAGGTATTATTTTGTGTGAGTTTGATTGCTTTGGCTaGGTGCATCTCCCCAGCCCC +
Preference number: 4 (lower is better)
Translates to: LRVYIAGGNVPRGIILCEFDCFG*VHLPSP
Trigger: GGGGCTGGGGAGATGCACCCAGCCAAAGCAATCAAA...CTCACACAAAATAATACCTCGAGGTACATTTCCCCCTGCAATGTAAACCCTTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp TCTGACGACTGGCCTCTGATATATACAGGACAATCCAAGCTTTGGTGGAAAAGAGTTTATTCCAGGAATTaGGCTGTCGGCCCGTCTCAT +
Preference number: 4 (lower is better)
Translates to: SDDWPLIYTGQSKLWWKRVYSRN*AVGPSH
Trigger: ATGAGACGGGCCGACAGCCCAATTCCTGGAATAAAC...TCTTTTCCACCAAAGCTTGGATTGTCCTGTATATATCAGAGGCCAGTCGTCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR CCA 90 bp TCCCTAATGACTAAAGCTGACCGTCTGTTTGTTTGTATCCAACGGATAGCTTCTTGCTCCAGCTGGAATTaGAAGGTCGAACGTTGCCTG +
Preference number: 4 (lower is better)
Translates to: SLMTKADRLFVCIQRIASCSSWN*KVERCL
Trigger: CAGGCAACGTTCGACCTTCCAATTCCAGCTGGAGCA...AGAAGCTATCCGTTGGATACAAACAAACAGACGGTCAGCTTTAGTCATTAGGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp GGATTTTTGCTGTACCTTCCTGTTACCTGTTTGTGTGCAAAGTTGGAAAGCTGCCGATTTACTGGTCATTaGGGTGGGCAGGTTTGGTTC +
Preference number: 4 (lower is better)
Translates to: GFLLYLPVTCLCAKLESCRFTGH*GGQVWF
Trigger: GAACCAAACCTGCCCACCCCAATGACCAGTAAATCG...GCAGCTTTCCAACTTTGCACACAAACAGGTAACAGGAAGGTACAGCAAAAATCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
3UTR CAA 72 bp GAGGGCTCATGCAGGCTTGTATATGTGAACACTCACTaGAGTCATGCCTGTCAATCTCTTTTGAGGCTAGGT +
Preference number: 4 (lower is better)
Translates to: EGSCRLVYVNTH*SHACQSLLRLG
Trigger: ACCTAGCCTCAAAAGAGATTGACAGGCATGACTCAAGTGAGTGTTCACATATACAAGCCTGCATGAGCCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp ACTTTCAGGTCAGCACGAGTGAAGCGTGGTTTCCTGAGCTTGAAGGGCTCTGAAAAGAGGATTCATCCATaGATCATTGTTTCCTCCTTT +
Preference number: 4 (lower is better)
Translates to: TFRSARVKRGFLSLKGSEKRIHP*IIVSSF
Trigger: AAAGGAGGAAACAATGATTCATGGATGAATCCTCTT...TTCAGAGCCCTTCAAGCTCAGGAAACCACGCTTCACTCGTGCTGACCTGAAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp GGATTTTTGCTGTACCTTCCTGTTACCTGTTTGTGTGCAAAGTTGGAAAGCTGCGTGTGTCACCAGGGATaGTATCAAACTGGTTGTACG +
Preference number: 4 (lower is better)
Translates to: GFLLYLPVTCLCAKLESCVCHQG*YQTGCT
Trigger: CGTACAACCAGTTTGATATCATCCCTGGTGACACAC...GCAGCTTTCCAACTTTGCACACAAACAGGTAACAGGAAGGTACAGCAAAAATCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp AACTTTTACAGCCACCCCTCTGGGAGTTGTACACACCTTTCAGTAGCCGAAGGGTGGAAAGGAACAAAGTaGTGGCATTCTCATCTATAT +
Preference number: 4 (lower is better)
Translates to: NFYSHPSGSCTHLSVAEGWKGTK*WHSHLY
Trigger: ATATAGATGAGAATGCCATCACTTTGTTCCTTTCCA...CCCTTCGGCTACTGAAAGGTGTGTACAACTCCCAGAGGGGTGGCTGTAAAAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp TCCCTAATGACTAAAGCTGACCGTCTGTTTGTTTGTATCCAACGGATAGCTTCTAAGCTCCCAGCAAGTTaGCAAAAAGAAGGGGGAGGT +
Preference number: 4 (lower is better)
Translates to: SLMTKADRLFVCIQRIASKLPAS*QKEGGG
Trigger: ACCTCCCCCTTCTTTTTGTCAACTTGCTGGGAGCTT...AGAAGCTATCCGTTGGATACAAACAAACAGACGGTCAGCTTTAGTCATTAGGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp GGATTTTTGCTGTACCTTCCTGTTACCTGTTTGTGTGCAAAGTTGGAAAGCTGCGATACTGGATCTAATTaGCAGCAGAGGTCCTCTGTC +
Preference number: 4 (lower is better)
Translates to: GFLLYLPVTCLCAKLESCDTGSN*QQRSSV
Trigger: GACAGAGGACCTCTGCTGTCAATTAGATCCAGTATC...GCAGCTTTCCAACTTTGCACACAAACAGGTAACAGGAAGGTACAGCAAAAATCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp TTAAGGGTTTACATTGCAGGGGGAAATGTACCTCGAGGTATTATTTTGTGTGAGTCCAGGGTTGGGGACTaGGGGATCAGAGATGTTACA +
Preference number: 4 (lower is better)
Translates to: LRVYIAGGNVPRGIILCESRVGD*GIRDVT
Trigger: TGTAACATCTCTGATCCCTCAGTCCCCAACCCTGGA...CTCACACAAAATAATACCTCGAGGTACATTTCCCCCTGCAATGTAAACCCTTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp ACTAAAGCGGTTTTAGAGAAATTGCAGGCAGCAACCCCACCCACTCCCTTTACCGTTAATGCATACACATaGAGTGTGACAAAACTTGGC +
Preference number: 4 (lower is better)
Translates to: TKAVLEKLQAATPPTPFTVNAYT*SVTKLG
Trigger: GCCAAGTTTTGTCACACTTCATGTGTATGCATTAAC...GGTAAAGGGAGTGGGTGGGGTTGCTGCCTGCAATTTCTCTAAAACCGCTTTAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp AACTTTTACAGCCACCCCTCTGGGAGTTGTACACACCTTTCAGTAGCCGAAGGGGTTATGACAAGAGACTaGCAGCTTAAAAACTACTCA +
Preference number: 4 (lower is better)
Translates to: NFYSHPSGSCTHLSVAEGVMTRD*QLKNYS
Trigger: TGAGTAGTTTTTAAGCTGTCAGTCTCTTGTCATAAC...CCCTTCGGCTACTGAAAGGTGTGTACAACTCCCAGAGGGGTGGCTGTAAAAGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp TCTGAACCAAGAAAGGTTGAGAGCTCCAGGTATTGTGTGGAGAACATTCTGGAGGCTGACAGATCCACATaGGCAGCATTTGTTAAAAGC +
Preference number: 4 (lower is better)
Translates to: SEPRKVESSRYCVENILEADRST*AAFVKS
Trigger: GCTTTTAACAAATGCTGCTCATGTGGATCTGTCAGC...CTCCAGAATGTTCTCCACACAATACCTGGAGCTCTCAACCTTTCTTGGTTCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp ACTAAAGCGGTTTTAGAGAAATTGCAGGCAGCAACCCCACCCACTCCCTTTACCCTGAAAAGGGCTTCTTaGCTAGTAAAGGGTTTATCT +
Preference number: 4 (lower is better)
Translates to: TKAVLEKLQAATPPTPFTLKRAS*LVKGLS
Trigger: AGATAAACCCTTTACTAGTCAAGAAGCCCTTTTCAG...GGTAAAGGGAGTGGGTGGGGTTGCTGCCTGCAATTTCTCTAAAACCGCTTTAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp GGGTTTATCTTAAAGATGGGGGCGAAGGGGGTGTCTGCAAAGAAGCAATTCAAAAGGAGTGGGAACAGTTaGGCTGTTGTATCTGCTTTT +
Preference number: 4 (lower is better)
Translates to: GFILKMGAKGVSAKKQFKRSGNS*AVVSAF
Trigger: AAAAGCAGATACAACAGCTCAACTGTTCCCACTCCT...TTTGAATTGCTTCTTTGCAGACACCCCCTTCGCCCCCATCTTTAAGATAAACCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp TGTGCACGTGTCTCTGTGAGCACATTCACGGTGCATGCACCATTTTTGATGTCTGGAGGGCATAGAATGTaGAGTTATAAGCACATAGTG +
Preference number: 4 (lower is better)
Translates to: CARVSVSTFTVHAPFLMSGGHRM*SYKHIV
Trigger: CACTATGTGCTTATAACTTCACATTCTATGCCCTCC...AGACATCAAAAATGGTGCATGCACCGTGAATGTGCTCACAGAGACACGTGCACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp TTAAGGGTTTACATTGCAGGGGGAAATGTACCTCGAGGTATTATTTTGTGTGAGCGACGGCCAGAGTTATaGCTGTCACTACTTCCTGCT +
Preference number: 4 (lower is better)
Translates to: LRVYIAGGNVPRGIILCERRPEL*LSLLPA
Trigger: AGCAGGAAGTAGTGACAGTCATAACTCTGGCCGTCG...CTCACACAAAATAATACCTCGAGGTACATTTCCCCCTGCAATGTAAACCCTTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp ACTTCACAAATTATTTACGTTTGGAATTCTGACGACTGGCCTCTGATATATACACGCCCCACCCAGGACTaGTTTCATTTGGCTCACCCC +
Preference number: 4 (lower is better)
Translates to: TSQIIYVWNSDDWPLIYTRPTQD*FHLAHP
Trigger: GGGGTGAGCCAAATGAAAGCAGTCCTGGGTGGGGCG...TGTATATATCAGAGGCCAGTCGTCAGAATTCCAAACGTAAATAATTTGTGAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR GCA 90 bp CTCTCCACACTCGAGACTTGCAGATGCACGTGTGACGGTGCCATTCTTCGTATACAGACAAATCCATTTTaGTGCTTGGATTATCTTCAG +
Preference number: 4 (lower is better)
Translates to: LSTLETCRCTCDGAILRIQTNPF*CLDYLQ
Trigger: CTGAAGATAATCCAAGCAGCAAAATGGATTTGTCTG...TATACGAAGAATGGCACCGTCACACGTGCATCTGCAAGTCTCGAGTGTGGAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR GCA 90 bp GGGTTTATCTTAAAGATGGGGGCGAAGGGGGTGTCTGCAAAGAAGCAATTCAAACAGACCTCTCGATTGTaGTGTGCTGTTTCCAAACAA +
Preference number: 4 (lower is better)
Translates to: GFILKMGAKGVSAKKQFKQTSRL*CAVSKQ
Trigger: TTGTTTGGAAACAGCACAGCACAATCGAGAGGTCTG...TTTGAATTGCTTCTTTGCAGACACCCCCTTCGCCCCCATCTTTAAGATAAACCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp TGTGCACGTGTCTCTGTGAGCACATTCACGGTGCATGCACCATTTTTGATGTCTATAGCGCCATTTTTGTaGATATTGGCTTCCTGTGTG +
Preference number: 4 (lower is better)
Translates to: CARVSVSTFTVHAPFLMSIAPFL*ILASCV
Trigger: CACACAGGAAGCCAATATGCACAAAAATGGCGCTAT...AGACATCAAAAATGGTGCATGCACCGTGAATGTGCTCACAGAGACACGTGCACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp TCTGAACCAAGAAAGGTTGAGAGCTCCAGGTATTGTGTGGAGAACATTCTGGAGGAGGCCAACTGGCATTaGTGGATTTACTTCCGATTT +
Preference number: 4 (lower is better)
Translates to: SEPRKVESSRYCVENILEEANWH*WIYFRF
Trigger: AAATCGGAAGTAAATCCAGCAATGCCAGTTGGCCTC...CTCCAGAATGTTCTCCACACAATACCTGGAGCTCTCAACCTTTCTTGGTTCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp GGGTTTATCTTAAAGATGGGGGCGAAGGGGGTGTCTGCAAAGAAGCAATTCAAAGAGGCCAACTGGCATTaGTGGATTTACTTCCGATTT +
Preference number: 4 (lower is better)
Translates to: GFILKMGAKGVSAKKQFKEANWH*WIYFRF
Trigger: AAATCGGAAGTAAATCCAGCAATGCCAGTTGGCCTC...TTTGAATTGCTTCTTTGCAGACACCCCCTTCGCCCCCATCTTTAAGATAAACCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp TTAAGGGTTTACATTGCAGGGGGAAATGTACCTCGAGGTATTATTTTGTGTGAGAGCAGTGGGCCATGCTaGATGCAGATCGTTCTCAAG +
Preference number: 4 (lower is better)
Translates to: LRVYIAGGNVPRGIILCESSGPC*MQIVLK
Trigger: CTTGAGAACGATCTGCATGCAGCATGGCCCACTGCT...CTCACACAAAATAATACCTCGAGGTACATTTCCCCCTGCAATGTAAACCCTTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp GGGTTTATCTTAAAGATGGGGGCGAAGGGGGTGTCTGCAAAGAAGCAATTCAAACTGGGCAGTTACATGTaGCAGAACACACTGGTATTT +
Preference number: 4 (lower is better)
Translates to: GFILKMGAKGVSAKKQFKLGSYM*QNTLVF
Trigger: AAATACCAGTGTGTTCTGGCACATGTAACTGCCCAG...TTTGAATTGCTTCTTTGCAGACACCCCCTTCGCCCCCATCTTTAAGATAAACCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp TTAAGGGTTTACATTGCAGGGGGAAATGTACCTCGAGGTATTATTTTGTGTGAGACACCAGAACGAGCATaGCTGGGCAGTTACATGTGC +
Preference number: 4 (lower is better)
Translates to: LRVYIAGGNVPRGIILCETPERA*LGSYMC
Trigger: GCACATGTAACTGCCCAGGCATGCTCGTTCTGGTGT...CTCACACAAAATAATACCTCGAGGTACATTTCCCCCTGCAATGTAAACCCTTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp GGATTTTTGCTGTACCTTCCTGTTACCTGTTTGTGTGCAAAGTTGGAAAGCTGCAGAGACAGAGAAGGATaGACGCGAATGCACATGAAC +
Preference number: 4 (lower is better)
Translates to: GFLLYLPVTCLCAKLESCRDREG*TRMHMN
Trigger: GTTCATGTGCATTCGCGTGCATCCTTCTCTGTCTCT...GCAGCTTTCCAACTTTGCACACAAACAGGTAACAGGAAGGTACAGCAAAAATCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp AACTTTTACAGCCACCCCTCTGGGAGTTGTACACACCTTTCAGTAGCCGAAGGGACTAACGAAAAGGCCTaGATGAAACTTAACAGATAC +
Preference number: 4 (lower is better)
Translates to: NFYSHPSGSCTHLSVAEGTNEKA*MKLNRY
Trigger: GTATCTGTTAAGTTTCATGCAGGCCTTTTCGTTAGT...CCCTTCGGCTACTGAAAGGTGTGTACAACTCCCAGAGGGGTGGCTGTAAAAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp TCCCTAATGACTAAAGCTGACCGTCTGTTTGTTTGTATCCAACGGATAGCTTCTTTAAATTCAGCCCACTaGCTTTGGGGCCTGTCCAGA +
Preference number: 4 (lower is better)
Translates to: SLMTKADRLFVCIQRIASLNSAH*LWGLSR
Trigger: TCTGGACAGGCCCCAAAGGCAGTGGGCTGAATTTAA...AGAAGCTATCCGTTGGATACAAACAAACAGACGGTCAGCTTTAGTCATTAGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp GGATTTTTGCTGTACCTTCCTGTTACCTGTTTGTGTGCAAAGTTGGAAAGCTGCGCAAGCCTGTATCTATaGCAGAGTGTGGTAGAAGAG +
Preference number: 4 (lower is better)
Translates to: GFLLYLPVTCLCAKLESCASLYL*QSVVEE
Trigger: CTCTTCTACCACACTCTGGCATAGATACAGGCTTGC...GCAGCTTTCCAACTTTGCACACAAACAGGTAACAGGAAGGTACAGCAAAAATCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp TGTGCACGTGTCTCTGTGAGCACATTCACGGTGCATGCACCATTTTTGATGTCTTTCCTTTCACAGCTCTaGTACAACAGCATCATAAGC +
Preference number: 4 (lower is better)
Translates to: CARVSVSTFTVHAPFLMSFLSQL*YNSIIS
Trigger: GCTTATGATGCTGTTGTAGCAGAGCTGTGAAAGGAA...AGACATCAAAAATGGTGCATGCACCGTGAATGTGCTCACAGAGACACGTGCACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp AATGAAGCTGAAGGAATCGAGTGGGAGGGACTGTTCTCCTCTTTGGGGGAGCTCCTCAACTCTACACTGTaGAATATTGATGCTAATGAA +
Preference number: 4 (lower is better)
Translates to: NEAEGIEWEGLFSSLGELLNSTL*NIDANE
Trigger: TTCATTAGCATCAATATTGCACAGTGTAGAGTTGAG...GAGCTCCCCCAAAGAGGAGAACAGTCCCTCCCACTCGATTCCTTCAGCTTCATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp GGATTTTTGCTGTACCTTCCTGTTACCTGTTTGTGTGCAAAGTTGGAAAGCTGCCCTGTGGAGTTCCATTaGTGCACTGGATTAACACTG +
Preference number: 4 (lower is better)
Translates to: GFLLYLPVTCLCAKLESCPVEFH*CTGLTL
Trigger: CAGTGTTAATCCAGTGCAGCAATGGAACTCCACAGG...GCAGCTTTCCAACTTTGCACACAAACAGGTAACAGGAAGGTACAGCAAAAATCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp GGGTTTATCTTAAAGATGGGGGCGAAGGGGGTGTCTGCAAAGAAGCAATTCAAAGTTAAGGGTTTACATTaGAGGGGGAAATGTACCTCG +
Preference number: 4 (lower is better)
Translates to: GFILKMGAKGVSAKKQFKVKGLH*RGKCTS
Trigger: CGAGGTACATTTCCCCCTGCAATGTAAACCCTTAAC...TTTGAATTGCTTCTTTGCAGACACCCCCTTCGCCCCCATCTTTAAGATAAACCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp GGATTTTTGCTGTACCTTCCTGTTACCTGTTTGTGTGCAAAGTTGGAAAGCTGCTCCCCCGACCTCCTCTaGTCTTTCTTCTTAAACATG +
Preference number: 4 (lower is better)
Translates to: GFLLYLPVTCLCAKLESCSPDLL*SFFLNM
Trigger: CATGTTTAAGAAGAAAGAGCAGAGGAGGTCGGGGGA...GCAGCTTTCCAACTTTGCACACAAACAGGTAACAGGAAGGTACAGCAAAAATCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp TCCCTAATGACTAAAGCTGACCGTCTGTTTGTTTGTATCCAACGGATAGCTTCTACCCTGGCACTAGATTaGTGGAAGAGATGGCAGCTA +
Preference number: 4 (lower is better)
Translates to: SLMTKADRLFVCIQRIASTLALD*WKRWQL
Trigger: TAGCTGCCATCTCTTCCAGCAATCTAGTGCCAGGGT...AGAAGCTATCCGTTGGATACAAACAAACAGACGGTCAGCTTTAGTCATTAGGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp GGATTTTTGCTGTACCTTCCTGTTACCTGTTTGTGTGCAAAGTTGGAAAGCTGCTGCAGGGGATGGATCTaGTGGAAGAGAGAAATTCAG +
Preference number: 4 (lower is better)
Translates to: GFLLYLPVTCLCAKLESCCRGWI*WKREIQ
Trigger: CTGAATTTCTCTCTTCCAGCAGATCCATCCCCTGCA...GCAGCTTTCCAACTTTGCACACAAACAGGTAACAGGAAGGTACAGCAAAAATCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp AACTTTTACAGCCACCCCTCTGGGAGTTGTACACACCTTTCAGTAGCCGAAGGGATCTACTTCCTCTATTaGCCATCAAAGAGAGAAAAG +
Preference number: 4 (lower is better)
Translates to: NFYSHPSGSCTHLSVAEGIYFLY*PSKREK
Trigger: CTTTTCTCTCTTTGATGGGCAATAGAGGAAGTAGAT...CCCTTCGGCTACTGAAAGGTGTGTACAACTCCCAGAGGGGTGGCTGTAAAAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp GGATTTTTGCTGTACCTTCCTGTTACCTGTTTGTGTGCAAAGTTGGAAAGCTGCTCTTTCGATCTCCAGTaGTTTGTGAAGGGGCATCAG +
Preference number: 4 (lower is better)
Translates to: GFLLYLPVTCLCAKLESCSFDLQ*FVKGHQ
Trigger: CTGATGCCCCTTCACAAAGCACTGGAGATCGAAAGA...GCAGCTTTCCAACTTTGCACACAAACAGGTAACAGGAAGGTACAGCAAAAATCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp ACTAAAGCGGTTTTAGAGAAATTGCAGGCAGCAACCCCACCCACTCCCTTTACCCATTGTTTCCAGAATTaGTTTGTCCAGAGACTGTGT +
Preference number: 4 (lower is better)
Translates to: TKAVLEKLQAATPPTPFTHCFQN*FVQRLC
Trigger: ACACAGTCTCTGGACAAAGCAATTCTGGAAACAATG...GGTAAAGGGAGTGGGTGGGGTTGCTGCCTGCAATTTCTCTAAAACCGCTTTAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp TCTGAACCAAGAAAGGTTGAGAGCTCCAGGTATTGTGTGGAGAACATTCTGGAGACTGTCACTACTTCCTaGTTTGTGGTTGCTTCCAGT +
Preference number: 4 (lower is better)
Translates to: SEPRKVESSRYCVENILETVTTS*FVVASS
Trigger: ACTGGAAGCAACCACAAAGCAGGAAGTAGTGACAGT...CTCCAGAATGTTCTCCACACAATACCTGGAGCTCTCAACCTTTCTTGGTTCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp GGGTTTATCTTAAAGATGGGGGCGAAGGGGGTGTCTGCAAAGAAGCAATTCAAACAGACTTCATTTGATTaGTTTGGCTGGGTGCATCTC +
Preference number: 4 (lower is better)
Translates to: GFILKMGAKGVSAKKQFKQTSFD*FGWVHL
Trigger: GAGATGCACCCAGCCAAAGCAATCAAATGAAGTCTG...TTTGAATTGCTTCTTTGCAGACACCCCCTTCGCCCCCATCTTTAAGATAAACCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp TGGAATTCTGACGACTGGCCTCTGATATATACAGGACAATCCAAGCTTTGGTGGCAGACTTCATTTGATTaGTTTGGCTGGGTGCATCTC +
Preference number: 4 (lower is better)
Translates to: WNSDDWPLIYTGQSKLWWQTSFD*FGWVHL
Trigger: GAGATGCACCCAGCCAAAGCAATCAAATGAAGTCTG...CCACCAAAGCTTGGATTGTCCTGTATATATCAGAGGCCAGTCGTCAGAATTCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR CCA 90 bp TTAAGGGTTTACATTGCAGGGGGAAATGTACCTCGAGGTATTATTTTGTGTGAGATTGACTGGTGGCGATaGAGAGCTGCCAATTGGGCT +
Preference number: 4 (lower is better)
Translates to: LRVYIAGGNVPRGIILCEIDWWR*RAANWA
Trigger: AGCCCAATTGGCAGCTCTCCATCGCCACCAGTCAAT...CTCACACAAAATAATACCTCGAGGTACATTTCCCCCTGCAATGTAAACCCTTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp TGGAATTCTGACGACTGGCCTCTGATATATACAGGACAATCCAAGCTTTGGTGGGGAAGTACCATTATCTaGAGCAGGTGGTGTGCTTTT +
Preference number: 4 (lower is better)
Translates to: WNSDDWPLIYTGQSKLWWGSTII*SRWCAF
Trigger: AAAAGCACACCACCTGCTCCAGATAATGGTACTTCC...CCACCAAAGCTTGGATTGTCCTGTATATATCAGAGGCCAGTCGTCAGAATTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR CCA 90 bp TTAAGGGTTTACATTGCAGGGGGAAATGTACCTCGAGGTATTATTTTGTGTGAGCTTGCGCCCGGAGACTaGGAGAAGAATTTAGTGGCT +
Preference number: 4 (lower is better)
Translates to: LRVYIAGGNVPRGIILCELAPGD*EKNLVA
Trigger: AGCCACTAAATTCTTCTCCCAGTCTCCGGGCGCAAG...CTCACACAAAATAATACCTCGAGGTACATTTCCCCCTGCAATGTAAACCCTTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp TCTGAACCAAGAAAGGTTGAGAGCTCCAGGTATTGTGTGGAGAACATTCTGGAGGGAATTTGTGGAAGCTaGCTCAGCATGGCAATTTGT +
Preference number: 4 (lower is better)
Translates to: SEPRKVESSRYCVENILEGICGS*LSMAIC
Trigger: ACAAATTGCCATGCTGAGCCAGCTTCCACAAATTCC...CTCCAGAATGTTCTCCACACAATACCTGGAGCTCTCAACCTTTCTTGGTTCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp AGAATTTACTCACTACTTCACAAATTATTTACGTTTGGAATTCTGACGACTGGCCGAGTGCTTCATGCCTaGCTGCCTCTGCTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: RIYSLLHKLFTFGILTTGRVLHA*LPLLLL
Trigger: CAGCAGCAGCAGAGGCAGCCAGGCATGAAGCACTCG...GCCAGTCGTCAGAATTCCAAACGTAAATAATTTGTGAAGTAGTGAGTAAATTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR CCA 90 bp GGGTTTATCTTAAAGATGGGGGCGAAGGGGGTGTCTGCAAAGAAGCAATTCAAACCACATTCAATGCGTTaGGTACCATGTTGTCCAGAT +
Preference number: 4 (lower is better)
Translates to: GFILKMGAKGVSAKKQFKPHSMR*VPCCPD
Trigger: ATCTGGACAACATGGTACCCAACGCATTGAATGTGG...TTTGAATTGCTTCTTTGCAGACACCCCCTTCGCCCCCATCTTTAAGATAAACCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp TCTGAACCAAGAAAGGTTGAGAGCTCCAGGTATTGTGTGGAGAACATTCTGGAGATTCTGGAGGCCAACTaGCATTGCTGGATTTACTTC +
Preference number: 4 (lower is better)
Translates to: SEPRKVESSRYCVENILEILEAN*HCWIYF
Trigger: GAAGTAAATCCAGCAATGCCAGTTGGCCTCCAGAAT...CTCCAGAATGTTCTCCACACAATACCTGGAGCTCTCAACCTTTCTTGGTTCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp AATTCAGCAGCTGCCAGAATACTCACGGGTGCATCTTCATGCATGTTTGTCTACTTGGATACCTTTCCATaGCACTCCTGGTTGGAATTC +
Preference number: 4 (lower is better)
Translates to: NSAAARILTGASSCMFVYLDTFP*HSWLEF
Trigger: GAATTCCAACCAGGAGTGCCATGGAAAGGTATCCAA...GTAGACAAACATGCATGAAGATGCACCCGTGAGTATTCTGGCAGCTGCTGAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR CCA 90 bp TGGAATTCTGACGACTGGCCTCTGATATATACAGGACAATCCAAGCTTTGGTGGTTATCCCGCAGCAGTTaGTGGTCAGTATCTACAATG +
Preference number: 4 (lower is better)
Translates to: WNSDDWPLIYTGQSKLWWLSRSS*WSVSTM
Trigger: CATTGTAGATACTGACCACCAACTGCTGCGGGATAA...CCACCAAAGCTTGGATTGTCCTGTATATATCAGAGGCCAGTCGTCAGAATTCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR CCA 90 bp TCTGAACCAAGAAAGGTTGAGAGCTCCAGGTATTGTGTGGAGAACATTCTGGAGTTATCCCGCAGCAGTTaGTGGTCAGTATCTACAATG +
Preference number: 4 (lower is better)
Translates to: SEPRKVESSRYCVENILELSRSS*WSVSTM
Trigger: CATTGTAGATACTGACCACCAACTGCTGCGGGATAA...CTCCAGAATGTTCTCCACACAATACCTGGAGCTCTCAACCTTTCTTGGTTCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp GGATTTTTGCTGTACCTTCCTGTTACCTGTTTGTGTGCAAAGTTGGAAAGCTGCTGTTGGAGAGATGAGTaGGGTTGTGTCCTATGGGAT +
Preference number: 4 (lower is better)
Translates to: GFLLYLPVTCLCAKLESCCWRDE*GCVLWD
Trigger: ATCCCATAGGACACAACCCCACTCATCTCTCCAACA...GCAGCTTTCCAACTTTGCACACAAACAGGTAACAGGAAGGTACAGCAAAAATCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp ATATGTTCTGGTGCATCTTTAATTCAGCAGCTGCCAGAATACTCACGGGTGCATATCAGGGCAGTGCCCTaGGTTAGATTCAGATGGAAT +
Preference number: 4 (lower is better)
Translates to: ICSGASLIQQLPEYSRVHIRAVP*VRFRWN
Trigger: ATTCCATCTGAATCTAACCCAGGGCACTGCCCTGAT...ATGCACCCGTGAGTATTCTGGCAGCTGCTGAATTAAAGATGCACCAGAACATAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR CCA 90 bp ACTTCACAAATTATTTACGTTTGGAATTCTGACGACTGGCCTCTGATATATACAGTGCAGTTTGGGCCTTaGCCGCCTCCTGTTTGGTGC +
Preference number: 4 (lower is better)
Translates to: TSQIIYVWNSDDWPLIYTVQFGP*PPPVWC
Trigger: GCACCAAACAGGAGGCGGCCAAGGCCCAAACTGCAC...TGTATATATCAGAGGCCAGTCGTCAGAATTCCAAACGTAAATAATTTGTGAAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR CCA 90 bp TGTGCACGTGTCTCTGTGAGCACATTCACGGTGCATGCACCATTTTTGATGTCTCTTAATGCAGCCCAATaGAGTTGCTTTAGTAGCAGT +
Preference number: 4 (lower is better)
Translates to: CARVSVSTFTVHAPFLMSLNAAQ*SCFSSS
Trigger: ACTGCTACTAAAGCAACTCCATTGGGCTGCATTAAG...AGACATCAAAAATGGTGCATGCACCGTGAATGTGCTCACAGAGACACGTGCACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp GGATTTTTGCTGTACCTTCCTGTTACCTGTTTGTGTGCAAAGTTGGAAAGCTGCCAGCATAATGCAGACTaGGATGTCCACACAAGTGCT +
Preference number: 4 (lower is better)
Translates to: GFLLYLPVTCLCAKLESCQHNAD*DVHTSA
Trigger: AGCACTTGTGTGGACATCCCAGTCTGCATTATGCTG...GCAGCTTTCCAACTTTGCACACAAACAGGTAACAGGAAGGTACAGCAAAAATCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp TTAAGGGTTTACATTGCAGGGGGAAATGTACCTCGAGGTATTATTTTGTGTGAGGCTCCCACCAAGGGTTaGAATGGGCAGGTATTTGCT +
Preference number: 4 (lower is better)
Translates to: LRVYIAGGNVPRGIILCEAPTKG*NGQVFA
Trigger: AGCAAATACCTGCCCATTCCAACCCTTGGTGGGAGC...CTCACACAAAATAATACCTCGAGGTACATTTCCCCCTGCAATGTAAACCCTTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp GGGTTTATCTTAAAGATGGGGGCGAAGGGGGTGTCTGCAAAGAAGCAATTCAAAAGTATCTTACATCTGTaGAGTGACTGGACCACACAC +
Preference number: 4 (lower is better)
Translates to: GFILKMGAKGVSAKKQFKSILHL*SDWTTH
Trigger: GTGTGTGGTCCAGTCACTCCACAGATGTAAGATACT...TTTGAATTGCTTCTTTGCAGACACCCCCTTCGCCCCCATCTTTAAGATAAACCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp AACTTTTACAGCCACCCCTCTGGGAGTTGTACACACCTTTCAGTAGCCGAAGGGCTCCAATTTCCTTTATaGGTGAGTATCTTACATCTG +
Preference number: 4 (lower is better)
Translates to: NFYSHPSGSCTHLSVAEGLQFPL*VSILHL
Trigger: CAGATGTAAGATACTCACCCATAAAGGAAATTGGAG...CCCTTCGGCTACTGAAAGGTGTGTACAACTCCCAGAGGGGTGGCTGTAAAAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp GGGTTTATCTTAAAGATGGGGGCGAAGGGGGTGTCTGCAAAGAAGCAATTCAAACAACCCACAGGAGTTTaGAAGAACCGATTGCTAACT +
Preference number: 4 (lower is better)
Translates to: GFILKMGAKGVSAKKQFKQPTGV*KNRLLT
Trigger: AGTTAGCAATCGGTTCTTCCAAACTCCTGTGGGTTG...TTTGAATTGCTTCTTTGCAGACACCCCCTTCGCCCCCATCTTTAAGATAAACCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp TCCCTAATGACTAAAGCTGACCGTCTGTTTGTTTGTATCCAACGGATAGCTTCTGACACGGGGACACCATaGACACAGAAACTGAAGAAC +
Preference number: 4 (lower is better)
Translates to: SLMTKADRLFVCIQRIASDTGTP*TQKLKN
Trigger: GTTCTTCAGTTTCTGTGTCCATGGTGTCCCCGTGTC...AGAAGCTATCCGTTGGATACAAACAAACAGACGGTCAGCTTTAGTCATTAGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp TCTGAACCAAGAAAGGTTGAGAGCTCCAGGTATTGTGTGGAGAACATTCTGGAGCTGGCACTAGATTGCTaGAAGAGATGGCAGCTATTT +
Preference number: 4 (lower is better)
Translates to: SEPRKVESSRYCVENILELALDC*KRWQLF
Trigger: AAATAGCTGCCATCTCTTCCAGCAATCTAGTGCCAG...CTCCAGAATGTTCTCCACACAATACCTGGAGCTCTCAACCTTTCTTGGTTCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp GGGTTTATCTTAAAGATGGGGGCGAAGGGGGTGTCTGCAAAGAAGCAATTCAAACTGGCACTAGATTGCTaGAAGAGATGGCAGCTATTT +
Preference number: 4 (lower is better)
Translates to: GFILKMGAKGVSAKKQFKLALDC*KRWQLF
Trigger: AAATAGCTGCCATCTCTTCCAGCAATCTAGTGCCAG...TTTGAATTGCTTCTTTGCAGACACCCCCTTCGCCCCCATCTTTAAGATAAACCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp GGGTTTATCTTAAAGATGGGGGCGAAGGGGGTGTCTGCAAAGAAGCAATTCAAACTCTGTCGGCCATTTTaGCTTGAACTAACTCTCTCT +
Preference number: 4 (lower is better)
Translates to: GFILKMGAKGVSAKKQFKLCRPF*LELTLS
Trigger: AGAGAGAGTTAGTTCAAGCCAAAATGGCCGACAGAG...TTTGAATTGCTTCTTTGCAGACACCCCCTTCGCCCCCATCTTTAAGATAAACCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp ACTAAAGCGGTTTTAGAGAAATTGCAGGCAGCAACCCCACCCACTCCCTTTACCCACTGTTGTTATCGGTaGTGTTTTCGGAAGAAGATT +
Preference number: 4 (lower is better)
Translates to: TKAVLEKLQAATPPTPFTHCCYR*CFRKKI
Trigger: AATCTTCTTCCGAAAACACCACCGATAACAACAGTG...GGTAAAGGGAGTGGGTGGGGTTGCTGCCTGCAATTTCTCTAAAACCGCTTTAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp ATATGTTCTGGTGCATCTTTAATTCAGCAGCTGCCAGAATACTCACGGGTGCATTGCTGGCCAGGCAGATaGGTTGCTATTTGGGTTAAA +
Preference number: 4 (lower is better)
Translates to: ICSGASLIQQLPEYSRVHCWPGR*VAIWVK
Trigger: TTTAACCCAAATAGCAACCCATCTGCCTGGCCAGCA...ATGCACCCGTGAGTATTCTGGCAGCTGCTGAATTAAAGATGCACCAGAACATAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR CCA 90 bp GGATTTTTGCTGTACCTTCCTGTTACCTGTTTGTGTGCAAAGTTGGAAAGCTGCCGTCTCATTCCATGCTaGGGATCTTTTGCAATCCTC +
Preference number: 4 (lower is better)
Translates to: GFLLYLPVTCLCAKLESCRLIPC*GSFAIL
Trigger: GAGGATTGCAAAAGATCCCCAGCATGGAATGAGACG...GCAGCTTTCCAACTTTGCACACAAACAGGTAACAGGAAGGTACAGCAAAAATCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp TTAAGGGTTTACATTGCAGGGGGAAATGTACCTCGAGGTATTATTTTGTGTGAGCTGATGCCGATTTACTaGTCATTGGGGTGGGCAGGT +
Preference number: 4 (lower is better)
Translates to: LRVYIAGGNVPRGIILCELMPIY*SLGWAG
Trigger: ACCTGCCCACCCCAATGACCAGTAAATCGGCATCAG...CTCACACAAAATAATACCTCGAGGTACATTTCCCCCTGCAATGTAAACCCTTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp AATTCAGCAGCTGCCAGAATACTCACGGGTGCATCTTCATGCATGTTTGTCTACCAGCAATCCCATATTTaGAAACTGTTTGGCAAGAGG +
Preference number: 4 (lower is better)
Translates to: NSAAARILTGASSCMFVYQQSHI*KLFGKR
Trigger: CCTCTTGCCAAACAGTTTTCAAATATGGGATTGCTG...GTAGACAAACATGCATGAAGATGCACCCGTGAGTATTCTGGCAGCTGCTGAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR TCA 90 bp TGTGCACGTGTCTCTGTGAGCACATTCACGGTGCATGCACCATTTTTGATGTCTCTAGGTTGGCGTTCATaGTTCAAGTATTTCAAGAGT +
Preference number: 4 (lower is better)
Translates to: CARVSVSTFTVHAPFLMSLGWRS*FKYFKS
Trigger: ACTCTTGAAATACTTGAATCATGAACGCCAACCTAG...AGACATCAAAAATGGTGCATGCACCGTGAATGTGCTCACAGAGACACGTGCACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp TGTGCACGTGTCTCTGTGAGCACATTCACGGTGCATGCACCATTTTTGATGTCTTTTTTGTTTTTAAAGTaGGGCTCCGTCAAGTCTTCC +
Preference number: 4 (lower is better)
Translates to: CARVSVSTFTVHAPFLMSFLFLK*GSVKSS
Trigger: GGAAGACTTGACGGAGCCTCACTTTAAAAACAAAAA...AGACATCAAAAATGGTGCATGCACCGTGAATGTGCTCACAGAGACACGTGCACA
44% GC, longest homopolymer 6 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp GGATTTTTGCTGTACCTTCCTGTTACCTGTTTGTGTGCAAAGTTGGAAAGCTGCCCTTCTCTAGATGTCTaGATACAAGCTGCTCTTCAC +
Preference number: 4 (lower is better)
Translates to: GFLLYLPVTCLCAKLESCPSLDV*IQAALH
Trigger: GTGAAGAGCAGCTTGTATTCAGACATCTAGAGAAGG...GCAGCTTTCCAACTTTGCACACAAACAGGTAACAGGAAGGTACAGCAAAAATCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp ACTAAAGCGGTTTTAGAGAAATTGCAGGCAGCAACCCCACCCACTCCCTTTACCTTTCAAAAGAATCCATaGTCGAGCTCTTACAAAGCT +
Preference number: 4 (lower is better)
Translates to: TKAVLEKLQAATPPTPFTFQKNP*SSSYKA
Trigger: AGCTTTGTAAGAGCTCGATCATGGATTCTTTTGAAA...GGTAAAGGGAGTGGGTGGGGTTGCTGCCTGCAATTTCTCTAAAACCGCTTTAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp ACTAAAGCGGTTTTAGAGAAATTGCAGGCAGCAACCCCACCCACTCCCTTTACCTGGAAAGGAACAAAGTaGTGGCATTCTCATCTATAT +
Preference number: 4 (lower is better)
Translates to: TKAVLEKLQAATPPTPFTWKGTK*WHSHLY
Trigger: ATATAGATGAGAATGCCATCACTTTGTTCCTTTCCA...GGTAAAGGGAGTGGGTGGGGTTGCTGCCTGCAATTTCTCTAAAACCGCTTTAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp TGTGCACGTGTCTCTGTGAGCACATTCACGGTGCATGCACCATTTTTGATGTCTAACATCACCAAAAACTaGAAGGAAACACTCCACATC +
Preference number: 4 (lower is better)
Translates to: CARVSVSTFTVHAPFLMSNITKN*KETLHI
Trigger: GATGTGGAGTGTTTCCTTTCAGTTTTTGGTGATGTT...AGACATCAAAAATGGTGCATGCACCGTGAATGTGCTCACAGAGACACGTGCACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp TTAAGGGTTTACATTGCAGGGGGAAATGTACCTCGAGGTATTATTTTGTGTGAGCTTACATCTGTGGAGTaGCTGGACCACACACACACA +
Preference number: 4 (lower is better)
Translates to: LRVYIAGGNVPRGIILCELTSVE*LDHTHT
Trigger: TGTGTGTGTGTGGTCCAGTCACTCCACAGATGTAAG...CTCACACAAAATAATACCTCGAGGTACATTTCCCCCTGCAATGTAAACCCTTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp TGTGCACGTGTCTCTGTGAGCACATTCACGGTGCATGCACCATTTTTGATGTCTATCAGAGATGTTACATaGGCCATCCATTTCTTCACA +
Preference number: 4 (lower is better)
Translates to: CARVSVSTFTVHAPFLMSIRDVT*AIHFFT
Trigger: TGTGAAGAAATGGATGGCTCATGTAACATCTCTGAT...AGACATCAAAAATGGTGCATGCACCGTGAATGTGCTCACAGAGACACGTGCACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp TCTGAACCAAGAAAGGTTGAGAGCTCCAGGTATTGTGTGGAGAACATTCTGGAGAAAGTTAACAGCCTATaGGCTTCTAGTTTCTGCGAG +
Preference number: 4 (lower is better)
Translates to: SEPRKVESSRYCVENILEKVNSL*ASSFCE
Trigger: CTCGCAGAAACTAGAAGCTCATAGGCTGTTAACTTT...CTCCAGAATGTTCTCCACACAATACCTGGAGCTCTCAACCTTTCTTGGTTCAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp TCCCTAATGACTAAAGCTGACCGTCTGTTTGTTTGTATCCAACGGATAGCTTCTTCTATCTCACTGTGCTaGCCTTACCACATTCGTCTC +
Preference number: 4 (lower is better)
Translates to: SLMTKADRLFVCIQRIASSISLC*PYHIRL
Trigger: GAGACGAATGTGGTAAGGTCAGCACAGTGAGATAGA...AGAAGCTATCCGTTGGATACAAACAAACAGACGGTCAGCTTTAGTCATTAGGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp GGGTTTATCTTAAAGATGGGGGCGAAGGGGGTGTCTGCAAAGAAGCAATTCAAACAGAGCATAACAAAGTaGCAAGGCTATGGATTCTAC +
Preference number: 4 (lower is better)
Translates to: GFILKMGAKGVSAKKQFKQSITK*QGYGFY
Trigger: GTAGAATCCATAGCCTTGTCACTTTGTTATGCTCTG...TTTGAATTGCTTCTTTGCAGACACCCCCTTCGCCCCCATCTTTAAGATAAACCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp GGGTTTATCTTAAAGATGGGGGCGAAGGGGGTGTCTGCAAAGAAGCAATTCAAAACTATACAAGATCAGTaGGATCCAACTGAAAAGGGC +
Preference number: 4 (lower is better)
Translates to: GFILKMGAKGVSAKKQFKTIQDQ*DPTEKG
Trigger: GCCCTTTTCAGTTGGATCTCACTGATCTTGTATAGT...TTTGAATTGCTTCTTTGCAGACACCCCCTTCGCCCCCATCTTTAAGATAAACCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp ACTAAAGCGGTTTTAGAGAAATTGCAGGCAGCAACCCCACCCACTCCCTTTACCAATAAAATTCCAAGGTaGACAGTGCCCAAATCAGAA +
Preference number: 4 (lower is better)
Translates to: TKAVLEKLQAATPPTPFTNKIPR*TVPKSE
Trigger: TTCTGATTTGGGCACTGTTCACCTTGGAATTTTATT...GGTAAAGGGAGTGGGTGGGGTTGCTGCCTGCAATTTCTCTAAAACCGCTTTAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp GGGTTTATCTTAAAGATGGGGGCGAAGGGGGTGTCTGCAAAGAAGCAATTCAAAGGAGGGCATAGAATGTaGAGTTATAAGCACATAGTG +
Preference number: 4 (lower is better)
Translates to: GFILKMGAKGVSAKKQFKGGHRM*SYKHIV
Trigger: CACTATGTGCTTATAACTTCACATTCTATGCCCTCC...TTTGAATTGCTTCTTTGCAGACACCCCCTTCGCCCCCATCTTTAAGATAAACCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp GGATTTTTGCTGTACCTTCCTGTTACCTGTTTGTGTGCAAAGTTGGAAAGCTGCTGCGTCTCTGTGAAGTaGCTCCCATTATTCACTGTT +
Preference number: 4 (lower is better)
Translates to: GFLLYLPVTCLCAKLESCCVSVK*LPLFTV
Trigger: AACAGTGAATAATGGGAGTCACTTCACAGAGACGCA...GCAGCTTTCCAACTTTGCACACAAACAGGTAACAGGAAGGTACAGCAAAAATCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp GGATTTTTGCTGTACCTTCCTGTTACCTGTTTGTGTGCAAAGTTGGAAAGCTGCGTTCCACCTTGGAACTaGTTTCTTCCGATACTTCTC +
Preference number: 4 (lower is better)
Translates to: GFLLYLPVTCLCAKLESCVPPWN*FLPILL
Trigger: GAGAAGTATCGGAAGAAAGCAGTTCCAAGGTGGAAC...GCAGCTTTCCAACTTTGCACACAAACAGGTAACAGGAAGGTACAGCAAAAATCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000301923.13
CDS-3UTR GCA 90 bp TCCCTAATGACTAAAGCTGACCGTCTGTTTGTTTGTATCCAACGGATAGCTTCTGCTCCTTCTCTTGTTTaGTTTCTTCACCAGGAGGTG +
Preference number: 4 (lower is better)
Translates to: SLMTKADRLFVCIQRIASAPSLV*FLHQEV
Trigger: CACCTCCTGGTGAAGAAAGCAAACAAGAGAAGGAGC...AGAAGCTATCCGTTGGATACAAACAAACAGACGGTCAGCTTTAGTCATTAGGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301923.13
CDS-3UTR GCA 90 bp TCCCTAATGACTAAAGCTGACCGTCTGTTTGTTTGTATCCAACGGATAGCTTCTCCACTGTTGGGAAACTaGTTGAGCATTGAGGCAGAA +
Preference number: 4 (lower is better)
Translates to: SLMTKADRLFVCIQRIASPLLGN*LSIEAE
Trigger: TTCTGCCTCAATGCTCAAGCAGTTTCCCAACAGTGG...AGAAGCTATCCGTTGGATACAAACAAACAGACGGTCAGCTTTAGTCATTAGGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp TTAAGGGTTTACATTGCAGGGGGAAATGTACCTCGAGGTATTATTTTGTGTGAGTGGTTCTGTAACAACTaGTGCTGTTGCTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: LRVYIAGGNVPRGIILCEWFCNN*CCCCCC
Trigger: GCAGCAGCAGCAACAGCAGCAGTTGTTACAGAACCA...CTCACACAAAATAATACCTCGAGGTACATTTCCCCCTGCAATGTAAACCCTTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp TCTGGTGCATCTTTAATTCAGCAGCTGCCAGAATACTCACGGGTGCATCTTCATATAGCGCCATTTTTGTaGATATTGGCTTCCTGTGTG +
Preference number: 4 (lower is better)
Translates to: SGASLIQQLPEYSRVHLHIAPFL*ILASCV
Trigger: CACACAGGAAGCCAATATGCACAAAAATGGCGCTAT...ATGAAGATGCACCCGTGAGTATTCTGGCAGCTGCTGAATTAAAGATGCACCAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR GCA 90 bp TTAAGGGTTTACATTGCAGGGGGAAATGTACCTCGAGGTATTATTTTGTGTGAGATCGGATCAGGGCAGTaGCCTGGGTTAGATTCAGAT +
Preference number: 4 (lower is better)
Translates to: LRVYIAGGNVPRGIILCEIGSGQ*PGLDSD
Trigger: ATCTGAATCTAACCCAGGGCACTGCCCTGATCCGAT...CTCACACAAAATAATACCTCGAGGTACATTTCCCCCTGCAATGTAAACCCTTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp TTAAGGGTTTACATTGCAGGGGGAAATGTACCTCGAGGTATTATTTTGTGTGAGGCAGACTGTCAGCGATaGAGCTTTCTGAGAAGTCAG +
Preference number: 4 (lower is better)
Translates to: LRVYIAGGNVPRGIILCEADCQR*SFLRSQ
Trigger: CTGACTTCTCAGAAAGCTGCATCGCTGACAGTCTGC...CTCACACAAAATAATACCTCGAGGTACATTTCCCCCTGCAATGTAAACCCTTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp GGATTTTTGCTGTACCTTCCTGTTACCTGTTTGTGTGCAAAGTTGGAAAGCTGCCGCCCCCTTCAGGTCTaGTATAATTCTCTTCACAAT +
Preference number: 4 (lower is better)
Translates to: GFLLYLPVTCLCAKLESCRPLQV*YNSLHN
Trigger: ATTGTGAAGAGAATTATAGCAGACCTGAAGGGGGCG...GCAGCTTTCCAACTTTGCACACAAACAGGTAACAGGAAGGTACAGCAAAAATCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp TCTGAACCAAGAAAGGTTGAGAGCTCCAGGTATTGTGTGGAGAACATTCTGGAGCACTCACTTGAGTCATaGCTGTCAATCTCTTTTGAG +
Preference number: 4 (lower is better)
Translates to: SEPRKVESSRYCVENILEHSLES*LSISFE
Trigger: CTCAAAAGAGATTGACAGGCATGACTCAAGTGAGTG...CTCCAGAATGTTCTCCACACAATACCTGGAGCTCTCAACCTTTCTTGGTTCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp TTAAGGGTTTACATTGCAGGGGGAAATGTACCTCGAGGTATTATTTTGTGTGAGTGGAAGCAGAGCTTTTaGATGGGGAACAGTGGTGGA +
Preference number: 4 (lower is better)
Translates to: LRVYIAGGNVPRGIILCEWKQSF*MGNSGG
Trigger: TCCACCACTGTTCCCCATGCAAAAGCTCTGCTTCCA...CTCACACAAAATAATACCTCGAGGTACATTTCCCCCTGCAATGTAAACCCTTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp GGGTTTATCTTAAAGATGGGGGCGAAGGGGGTGTCTGCAAAGAAGCAATTCAAAGGAACCCCTTCTATTTaGCCAAGACAAAGAGACTTT +
Preference number: 4 (lower is better)
Translates to: GFILKMGAKGVSAKKQFKGTPSI*PRQRDF
Trigger: AAAGTCTCTTTGTCTTGGGCAAATAGAAGGGGTTCC...TTTGAATTGCTTCTTTGCAGACACCCCCTTCGCCCCCATCTTTAAGATAAACCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp TCTGAACCAAGAAAGGTTGAGAGCTCCAGGTATTGTGTGGAGAACATTCTGGAGGGAACCCCTTCTATTTaGCCAAGACAAAGAGACTTT +
Preference number: 4 (lower is better)
Translates to: SEPRKVESSRYCVENILEGTPSI*PRQRDF
Trigger: AAAGTCTCTTTGTCTTGGGCAAATAGAAGGGGTTCC...CTCCAGAATGTTCTCCACACAATACCTGGAGCTCTCAACCTTTCTTGGTTCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp ACTTTCAGGTCAGCACGAGTGAAGCGTGGTTTCCTGAGCTTGAAGGGCTCTGAATTTGGAACCTTAACTTaGAACACTGCTAAGTTAACT +
Preference number: 4 (lower is better)
Translates to: TFRSARVKRGFLSLKGSEFGTLT*NTAKLT
Trigger: AGTTAACTTAGCAGTGTTGCAAGTTAAGGTTCCAAA...TTCAGAGCCCTTCAAGCTCAGGAAACCACGCTTCACTCGTGCTGACCTGAAAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp AACTTTTACAGCCACCCCTCTGGGAGTTGTACACACCTTTCAGTAGCCGAAGGGTTTGGAACCTTAACTTaGAACACTGCTAAGTTAACT +
Preference number: 4 (lower is better)
Translates to: NFYSHPSGSCTHLSVAEGFGTLT*NTAKLT
Trigger: AGTTAACTTAGCAGTGTTGCAAGTTAAGGTTCCAAA...CCCTTCGGCTACTGAAAGGTGTGTACAACTCCCAGAGGGGTGGCTGTAAAAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp GGGTTTATCTTAAAGATGGGGGCGAAGGGGGTGTCTGCAAAGAAGCAATTCAAAACATCCTGTTTACTCTaGAGAGAAAAACAGGCTTGG +
Preference number: 4 (lower is better)
Translates to: GFILKMGAKGVSAKKQFKTSCLL*REKQAW
Trigger: CCAAGCCTGTTTTTCTCTGCAGAGTAAACAGGATGT...TTTGAATTGCTTCTTTGCAGACACCCCCTTCGCCCCCATCTTTAAGATAAACCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp TCTGAACCAAGAAAGGTTGAGAGCTCCAGGTATTGTGTGGAGAACATTCTGGAGCAAATATTAGGGGTATaGCACAATCACTCGGGATCT +
Preference number: 4 (lower is better)
Translates to: SEPRKVESSRYCVENILEQILGV*HNHSGS
Trigger: AGATCCCGAGTGATTGTGGCATACCCCTAATATTTG...CTCCAGAATGTTCTCCACACAATACCTGGAGCTCTCAACCTTTCTTGGTTCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp TCCCTAATGACTAAAGCTGACCGTCTGTTTGTTTGTATCCAACGGATAGCTTCTCCTAGACCAGAGCAATaGAGGCGCTATGATTCATCA +
Preference number: 4 (lower is better)
Translates to: SLMTKADRLFVCIQRIASPRPEQ*RRYDSS
Trigger: TGATGAATCATAGCGCCTGCATTGCTCTGGTCTAGG...AGAAGCTATCCGTTGGATACAAACAAACAGACGGTCAGCTTTAGTCATTAGGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp TTAAGGGTTTACATTGCAGGGGGAAATGTACCTCGAGGTATTATTTTGTGTGAGGTTTACATACTGGTCTaGTGTCACTGTGTGGGAGGC +
Preference number: 4 (lower is better)
Translates to: LRVYIAGGNVPRGIILCEVYILV*CHCVGG
Trigger: GCCTCCCACACAGTGACAGCAGACCAGTATGTAAAC...CTCACACAAAATAATACCTCGAGGTACATTTCCCCCTGCAATGTAAACCCTTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp TCTGAACCAAGAAAGGTTGAGAGCTCCAGGTATTGTGTGGAGAACATTCTGGAGCTATGGATTCTACAGTaGAAACCAAAATGCCAGGGA +
Preference number: 4 (lower is better)
Translates to: SEPRKVESSRYCVENILELWILQ*KPKCQG
Trigger: TCCCTGGCATTTTGGTTTGCACTGTAGAATCCATAG...CTCCAGAATGTTCTCCACACAATACCTGGAGCTCTCAACCTTTCTTGGTTCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp TCCCTAATGACTAAAGCTGACCGTCTGTTTGTTTGTATCCAACGGATAGCTTCTTTCCAAGGTGAACAGTaGCCAAATCAGAAGGTGGGT +
Preference number: 4 (lower is better)
Translates to: SLMTKADRLFVCIQRIASFQGEQ*PNQKVG
Trigger: ACCCACCTTCTGATTTGGGCACTGTTCACCTTGGAA...AGAAGCTATCCGTTGGATACAAACAAACAGACGGTCAGCTTTAGTCATTAGGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp GGGTTTATCTTAAAGATGGGGGCGAAGGGGGTGTCTGCAAAGAAGCAATTCAAATGTTACCTGTTTGTGTaGAAAGTTGGAAAGCTGCCT +
Preference number: 4 (lower is better)
Translates to: GFILKMGAKGVSAKKQFKCYLFV*KVGKLP
Trigger: AGGCAGCTTTCCAACTTTGCACACAAACAGGTAACA...TTTGAATTGCTTCTTTGCAGACACCCCCTTCGCCCCCATCTTTAAGATAAACCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp AGAATTTACTCACTACTTCACAAATTATTTACGTTTGGAATTCTGACGACTGGCGTGAAGGGGCATCAGTaGTCCTGGAGGTGTTCCCCA +
Preference number: 4 (lower is better)
Translates to: RIYSLLHKLFTFGILTTGVKGHQ*SWRCSP
Trigger: TGGGGAACACCTCCAGGAGCACTGATGCCCCTTCAC...GCCAGTCGTCAGAATTCCAAACGTAAATAATTTGTGAAGTAGTGAGTAAATTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR GCA 90 bp TCTGACGACTGGCCTCTGATATATACAGGACAATCCAAGCTTTGGTGGAAAAGAACTGTCACTACTTCCTaGTTTGTGGTTGCTTCCAGT +
Preference number: 4 (lower is better)
Translates to: SDDWPLIYTGQSKLWWKRTVTTS*FVVASS
Trigger: ACTGGAAGCAACCACAAAGCAGGAAGTAGTGACAGT...TCTTTTCCACCAAAGCTTGGATTGTCCTGTATATATCAGAGGCCAGTCGTCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR GCA 90 bp AGAATTTACTCACTACTTCACAAATTATTTACGTTTGGAATTCTGACGACTGGCCTCATCCTTAGGTGTTaGAGGCTGTGGCCCGCTGCT +
Preference number: 4 (lower is better)
Translates to: RIYSLLHKLFTFGILTTGLILRC*RLWPAA
Trigger: AGCAGCGGGCCACAGCCTGCAACACCTAAGGATGAG...GCCAGTCGTCAGAATTCCAAACGTAAATAATTTGTGAAGTAGTGAGTAAATTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR CCA 90 bp GGATTTTTGCTGTACCTTCCTGTTACCTGTTTGTGTGCAAAGTTGGAAAGCTGCGGAAGTACCATTATCTaGAGCAGGTGGTGTGCTTTT +
Preference number: 4 (lower is better)
Translates to: GFLLYLPVTCLCAKLESCGSTII*SRWCAF
Trigger: AAAAGCACACCACCTGCTCCAGATAATGGTACTTCC...GCAGCTTTCCAACTTTGCACACAAACAGGTAACAGGAAGGTACAGCAAAAATCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301923.13
ENST00000454349.7
CDS-3UTR CCA 90 bp GGATTTTTGCTGTACCTTCCTGTTACCTGTTTGTGTGCAAAGTTGGAAAGCTGCAAGGCCCACTATCTGTaGTTCCCATGTCTTTGGAAT +
Preference number: 4 (lower is better)
Translates to: GFLLYLPVTCLCAKLESCKAHYL*FPCLWN
Trigger: ATTCCAAAGACATGGGAACCACAGATAGTGGGCCTT...GCAGCTTTCCAACTTTGCACACAAACAGGTAACAGGAAGGTACAGCAAAAATCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp ATATGTTCTGGTGCATCTTTAATTCAGCAGCTGCCAGAATACTCACGGGTGCATGAAGCTGGCTCAGCATaGCAATTTGTTGAGGAGATA +
Preference number: 4 (lower is better)
Translates to: ICSGASLIQQLPEYSRVHEAGSA*QFVEEI
Trigger: TATCTCCTCAACAAATTGCCATGCTGAGCCAGCTTC...ATGCACCCGTGAGTATTCTGGCAGCTGCTGAATTAAAGATGCACCAGAACATAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR CCA 90 bp TTAAGGGTTTACATTGCAGGGGGAAATGTACCTCGAGGTATTATTTTGTGTGAGAAACTGGGGAATTTGTaGAAGCTGGCTCAGCATGGC +
Preference number: 4 (lower is better)
Translates to: LRVYIAGGNVPRGIILCEKLGNL*KLAQHG
Trigger: GCCATGCTGAGCCAGCTTCCACAAATTCCCCAGTTT...CTCACACAAAATAATACCTCGAGGTACATTTCCCCCTGCAATGTAAACCCTTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp ACTTCACAAATTATTTACGTTTGGAATTCTGACGACTGGCCTCTGATATATACATGTCCAGATGCGGCTTaGGCCCAACAGGATGAGAGG +
Preference number: 4 (lower is better)
Translates to: TSQIIYVWNSDDWPLIYTCPDAA*AQQDER
Trigger: CCTCTCATCCTGTTGGGCCCAAGCCGCATCTGGACA...TGTATATATCAGAGGCCAGTCGTCAGAATTCCAAACGTAAATAATTTGTGAAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR CCA 90 bp ATATGTTCTGGTGCATCTTTAATTCAGCAGCTGCCAGAATACTCACGGGTGCATCCACATTCAATGCGTTaGGTACCATGTTGTCCAGAT +
Preference number: 4 (lower is better)
Translates to: ICSGASLIQQLPEYSRVHPHSMR*VPCCPD
Trigger: ATCTGGACAACATGGTACCCAACGCATTGAATGTGG...ATGCACCCGTGAGTATTCTGGCAGCTGCTGAATTAAAGATGCACCAGAACATAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR CCA 90 bp TCCCTAATGACTAAAGCTGACCGTCTGTTTGTTTGTATCCAACGGATAGCTTCTTTTGGTTTGAAGGTCTaGGAGCCCCACATTCAATGC +
Preference number: 4 (lower is better)
Translates to: SLMTKADRLFVCIQRIASFGLKV*EPHIQC
Trigger: GCATTGAATGTGGGGCTCCCAGACCTTCAAACCAAA...AGAAGCTATCCGTTGGATACAAACAAACAGACGGTCAGCTTTAGTCATTAGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp ATATGTTCTGGTGCATCTTTAATTCAGCAGCTGCCAGAATACTCACGGGTGCATTTGTTGGTGGAGATTTaGCAGGTAACCAGCTATCAC +
Preference number: 4 (lower is better)
Translates to: ICSGASLIQQLPEYSRVHLLVEI*QVTSYH
Trigger: GTGATAGCTGGTTACCTGCCAAATCTCCACCAACAA...ATGCACCCGTGAGTATTCTGGCAGCTGCTGAATTAAAGATGCACCAGAACATAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR CCA 90 bp GGATTTTTGCTGTACCTTCCTGTTACCTGTTTGTGTGCAAAGTTGGAAAGCTGCATTCTGGAGGCCAACTaGCATTGCTGGATTTACTTC +
Preference number: 4 (lower is better)
Translates to: GFLLYLPVTCLCAKLESCILEAN*HCWIYF
Trigger: GAAGTAAATCCAGCAATGCCAGTTGGCCTCCAGAAT...GCAGCTTTCCAACTTTGCACACAAACAGGTAACAGGAAGGTACAGCAAAAATCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp TCCCTAATGACTAAAGCTGACCGTCTGTTTGTTTGTATCCAACGGATAGCTTCTTGGGTTAGATTCAGATaGAATGTCAGCAGTGGGCCA +
Preference number: 4 (lower is better)
Translates to: SLMTKADRLFVCIQRIASWVRFR*NVSSGP
Trigger: TGGCCCACTGCTGACATTCCATCTGAATCTAACCCA...AGAAGCTATCCGTTGGATACAAACAAACAGACGGTCAGCTTTAGTCATTAGGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp TCCCTAATGACTAAAGCTGACCGTCTGTTTGTTTGTATCCAACGGATAGCTTCTATCAGGGCAGTGCCCTaGGTTAGATTCAGATGGAAT +
Preference number: 4 (lower is better)
Translates to: SLMTKADRLFVCIQRIASIRAVP*VRFRWN
Trigger: ATTCCATCTGAATCTAACCCAGGGCACTGCCCTGAT...AGAAGCTATCCGTTGGATACAAACAAACAGACGGTCAGCTTTAGTCATTAGGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp TCCCTAATGACTAAAGCTGACCGTCTGTTTGTTTGTATCCAACGGATAGCTTCTCAGCATAATGCAGACTaGGATGTCCACACAAGTGCT +
Preference number: 4 (lower is better)
Translates to: SLMTKADRLFVCIQRIASQHNAD*DVHTSA
Trigger: AGCACTTGTGTGGACATCCCAGTCTGCATTATGCTG...AGAAGCTATCCGTTGGATACAAACAAACAGACGGTCAGCTTTAGTCATTAGGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp TTAAGGGTTTACATTGCAGGGGGAAATGTACCTCGAGGTATTATTTTGTGTGAGCACCAAGGGTTGGAATaGGCAGGTATTTGCTGGTAC +
Preference number: 4 (lower is better)
Translates to: LRVYIAGGNVPRGIILCEHQGLE*AGICWY
Trigger: GTACCAGCAAATACCTGCCCATTCCAACCCTTGGTG...CTCACACAAAATAATACCTCGAGGTACATTTCCCCCTGCAATGTAAACCCTTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp TGTGCACGTGTCTCTGTGAGCACATTCACGGTGCATGCACCATTTTTGATGTCTCATCTGAGGTCAAAATaGAATCTGGCTGTTAACCTT +
Preference number: 4 (lower is better)
Translates to: CARVSVSTFTVHAPFLMSHLRSK*NLAVNL
Trigger: AAGGTTAACAGCCAGATTCCATTTTGACCTCAGATG...AGACATCAAAAATGGTGCATGCACCGTGAATGTGCTCACAGAGACACGTGCACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp TTAAGGGTTTACATTGCAGGGGGAAATGTACCTCGAGGTATTATTTTGTGTGAGCACCTCGTAGGTTCATaGCCTCTTTCTTCAGAGGCA +
Preference number: 4 (lower is better)
Translates to: LRVYIAGGNVPRGIILCEHLVGS*PLSSEA
Trigger: TGCCTCTGAAGAAAGAGGCCATGAACCTACGAGGTG...CTCACACAAAATAATACCTCGAGGTACATTTCCCCCTGCAATGTAAACCCTTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp GGGTTTATCTTAAAGATGGGGGCGAAGGGGGTGTCTGCAAAGAAGCAATTCAAACACCTTTCCCATTTTTaGCGAACACACATAGGATGT +
Preference number: 4 (lower is better)
Translates to: GFILKMGAKGVSAKKQFKHLSHF*RTHIGC
Trigger: ACATCCTATGTGTGTTCGCCAAAAATGGGAAAGGTG...TTTGAATTGCTTCTTTGCAGACACCCCCTTCGCCCCCATCTTTAAGATAAACCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp TCTGAACCAAGAAAGGTTGAGAGCTCCAGGTATTGTGTGGAGAACATTCTGGAGATTCAGTGTCTTTGCTaGCAATACAAGGCCACTCTT +
Preference number: 4 (lower is better)
Translates to: SEPRKVESSRYCVENILEIQCLC*QYKATL
Trigger: AAGAGTGGCCTTGTATTGCCAGCAAAGACACTGAAT...CTCCAGAATGTTCTCCACACAATACCTGGAGCTCTCAACCTTTCTTGGTTCAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp GGGTTTATCTTAAAGATGGGGGCGAAGGGGGTGTCTGCAAAGAAGCAATTCAAAAGATGGGTTGCTATTTaGGTTAAAGTTGCTGAAGCC +
Preference number: 4 (lower is better)
Translates to: GFILKMGAKGVSAKKQFKRWVAI*VKVAEA
Trigger: GGCTTCAGCAACTTTAACCCAAATAGCAACCCATCT...TTTGAATTGCTTCTTTGCAGACACCCCCTTCGCCCCCATCTTTAAGATAAACCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp TTAAGGGTTTACATTGCAGGGGGAAATGTACCTCGAGGTATTATTTTGTGTGAGTTGTCATTAGAGTCCTaGGGGCCAAAGTTCCAGGAC +
Preference number: 4 (lower is better)
Translates to: LRVYIAGGNVPRGIILCELSLES*GPKFQD
Trigger: GTCCTGGAACTTTGGCCCCCAGGACTCTAATGACAA...CTCACACAAAATAATACCTCGAGGTACATTTCCCCCTGCAATGTAAACCCTTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp AGAATTTACTCACTACTTCACAAATTATTTACGTTTGGAATTCTGACGACTGGCAAGACCATCCTTGATTaGGCTGGCGTCCACCTCCCC +
Preference number: 4 (lower is better)
Translates to: RIYSLLHKLFTFGILTTGKTILD*AGVHLP
Trigger: GGGGAGGTGGACGCCAGCCCAATCAAGGATGGTCTT...GCCAGTCGTCAGAATTCCAAACGTAAATAATTTGTGAAGTAGTGAGTAAATTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446273.1
3UTR CAA 72 bp AAAGAACAGCCAGAGAAACCCCACATTCAGGCTAAGTaGCAAATGGAAAGGAGCTCCCTGCTTTCATCATTA +
Preference number: 4 (lower is better)
Translates to: KEQPEKPHIQAK*QMERSSLLSSL
Trigger: TAATGATGAAAGCAGGGAGCTCCTTTCCATTTGCAACTTAGCCTGAATGTGGGGTTTCTCTGGCTGTTCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp GGGTTTATCTTAAAGATGGGGGCGAAGGGGGTGTCTGCAAAGAAGCAATTCAAAGGATTATCTTCAGTCTaGCTCAGCAATCCCATATTT +
Preference number: 4 (lower is better)
Translates to: GFILKMGAKGVSAKKQFKGLSSV*LSNPIF
Trigger: AAATATGGGATTGCTGAGTCAGACTGAAGATAATCC...TTTGAATTGCTTCTTTGCAGACACCCCCTTCGCCCCCATCTTTAAGATAAACCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp TTAAGGGTTTACATTGCAGGGGGAAATGTACCTCGAGGTATTATTTTGTGTGAGTGTTGGGAAACTGCTTaGGCATTGAGGCAGAAACCT +
Preference number: 4 (lower is better)
Translates to: LRVYIAGGNVPRGIILCECWETA*ALRQKP
Trigger: AGGTTTCTGCCTCAATGCTCAAGCAGTTTCCCAACA...CTCACACAAAATAATACCTCGAGGTACATTTCCCCCTGCAATGTAAACCCTTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp TTAAGGGTTTACATTGCAGGGGGAAATGTACCTCGAGGTATTATTTTGTGTGAGGTGTGTCACCAGGGATaGTATCAAACTGGTTGTACG +
Preference number: 4 (lower is better)
Translates to: LRVYIAGGNVPRGIILCEVCHQG*YQTGCT
Trigger: CGTACAACCAGTTTGATATCATCCCTGGTGACACAC...CTCACACAAAATAATACCTCGAGGTACATTTCCCCCTGCAATGTAAACCCTTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp TCCCTAATGACTAAAGCTGACCGTCTGTTTGTTTGTATCCAACGGATAGCTTCTCTATGTAATGAGAGGTaGCCAGCAAGCCTGTATCTA +
Preference number: 4 (lower is better)
Translates to: SLMTKADRLFVCIQRIASLCNER*PASLYL
Trigger: TAGATACAGGCTTGCTGGTCACCTCTCATTACATAG...AGAAGCTATCCGTTGGATACAAACAAACAGACGGTCAGCTTTAGTCATTAGGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp TCTGAACCAAGAAAGGTTGAGAGCTCCAGGTATTGTGTGGAGAACATTCTGGAGGTTAATGCATACACATaGAGTGTGACAAAACTTGGC +
Preference number: 4 (lower is better)
Translates to: SEPRKVESSRYCVENILEVNAYT*SVTKLG
Trigger: GCCAAGTTTTGTCACACTTCATGTGTATGCATTAAC...CTCCAGAATGTTCTCCACACAATACCTGGAGCTCTCAACCTTTCTTGGTTCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp GGGTTTATCTTAAAGATGGGGGCGAAGGGGGTGTCTGCAAAGAAGCAATTCAAAAATAGGGACCATTTCTaGAAATACACACACCTTTGG +
Preference number: 4 (lower is better)
Translates to: GFILKMGAKGVSAKKQFKNRDHF*KYTHLW
Trigger: CCAAAGGTGTGTGTATTTTCAGAAATGGTCCCTATT...TTTGAATTGCTTCTTTGCAGACACCCCCTTCGCCCCCATCTTTAAGATAAACCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp GGATTTTTGCTGTACCTTCCTGTTACCTGTTTGTGTGCAAAGTTGGAAAGCTGCATAAAGAAGCGACGATaGCCACATGTGGGACTTTTT +
Preference number: 4 (lower is better)
Translates to: GFLLYLPVTCLCAKLESCIKKRR*PHVGLF
Trigger: AAAAAGTCCCACATGTGGTCATCGTCGCTTCTTTAT...GCAGCTTTCCAACTTTGCACACAAACAGGTAACAGGAAGGTACAGCAAAAATCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp TTAAGGGTTTACATTGCAGGGGGAAATGTACCTCGAGGTATTATTTTGTGTGAGTCTATCTCACTGTGCTaGCCTTACCACATTCGTCTC +
Preference number: 4 (lower is better)
Translates to: LRVYIAGGNVPRGIILCESISLC*PYHIRL
Trigger: GAGACGAATGTGGTAAGGTCAGCACAGTGAGATAGA...CTCACACAAAATAATACCTCGAGGTACATTTCCCCCTGCAATGTAAACCCTTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp GGATTTTTGCTGTACCTTCCTGTTACCTGTTTGTGTGCAAAGTTGGAAAGCTGCCAGAGCATAACAAAGTaGCAAGGCTATGGATTCTAC +
Preference number: 4 (lower is better)
Translates to: GFLLYLPVTCLCAKLESCQSITK*QGYGFY
Trigger: GTAGAATCCATAGCCTTGTCACTTTGTTATGCTCTG...GCAGCTTTCCAACTTTGCACACAAACAGGTAACAGGAAGGTACAGCAAAAATCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp TCTGAACCAAGAAAGGTTGAGAGCTCCAGGTATTGTGTGGAGAACATTCTGGAGAGAAGCAATTCAAAATaGTCCATTCCAACCCTGCTT +
Preference number: 4 (lower is better)
Translates to: SEPRKVESSRYCVENILERSNSK*SIPTLL
Trigger: AAGCAGGGTTGGAATGGATCATTTTGAATTGCTTCT...CTCCAGAATGTTCTCCACACAATACCTGGAGCTCTCAACCTTTCTTGGTTCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp TTAAGGGTTTACATTGCAGGGGGAAATGTACCTCGAGGTATTATTTTGTGTGAGGGTCCAATTCTATCCTaGCCACTCACATTCCTCCAA +
Preference number: 4 (lower is better)
Translates to: LRVYIAGGNVPRGIILCEGPILS*PLTFLQ
Trigger: TTGGAGGAATGTGAGTGGTCAGGATAGAATTGGACC...CTCACACAAAATAATACCTCGAGGTACATTTCCCCCTGCAATGTAAACCCTTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp TCCCTAATGACTAAAGCTGACCGTCTGTTTGTTTGTATCCAACGGATAGCTTCTCAAGAGAAGCTGACATaGCAACTGAAACTGGGGAAT +
Preference number: 4 (lower is better)
Translates to: SLMTKADRLFVCIQRIASQEKLT*QLKLGN
Trigger: ATTCCCCAGTTTCAGTTGGCATGTCAGCTTCTCTTG...AGAAGCTATCCGTTGGATACAAACAAACAGACGGTCAGCTTTAGTCATTAGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp GGATTTTTGCTGTACCTTCCTGTTACCTGTTTGTGTGCAAAGTTGGAAAGCTGCATAGCGCCATTTTTGTaGATATTGGCTTCCTGTGTG +
Preference number: 4 (lower is better)
Translates to: GFLLYLPVTCLCAKLESCIAPFL*ILASCV
Trigger: CACACAGGAAGCCAATATGCACAAAAATGGCGCTAT...GCAGCTTTCCAACTTTGCACACAAACAGGTAACAGGAAGGTACAGCAAAAATCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp GGGTTTATCTTAAAGATGGGGGCGAAGGGGGTGTCTGCAAAGAAGCAATTCAAATCGCTAAGTTATACCTaGCTAAGCAAAACCACATAC +
Preference number: 4 (lower is better)
Translates to: GFILKMGAKGVSAKKQFKSLSYT*LSKTTY
Trigger: GTATGTGGTTTTGCTTAGGCAGGTATAACTTAGCGA...TTTGAATTGCTTCTTTGCAGACACCCCCTTCGCCCCCATCTTTAAGATAAACCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp GGGTTTATCTTAAAGATGGGGGCGAAGGGGGTGTCTGCAAAGAAGCAATTCAAATGTTATCACAGGGTCTaGACTAACTCTGGAAATCTA +
Preference number: 4 (lower is better)
Translates to: GFILKMGAKGVSAKKQFKCYHRV*TNSGNL
Trigger: TAGATTTCCAGAGTTAGTGCAGACCCTGTGATAACA...TTTGAATTGCTTCTTTGCAGACACCCCCTTCGCCCCCATCTTTAAGATAAACCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp TCCCTAATGACTAAAGCTGACCGTCTGTTTGTTTGTATCCAACGGATAGCTTCTAAGGCCACTCCACTTTaGCTCCAGTCAACTTTTACA +
Preference number: 4 (lower is better)
Translates to: SLMTKADRLFVCIQRIASKATPL*LQSTFT
Trigger: TGTAAAAGTTGACTGGAGGCAAAGTGGAGTGGCCTT...AGAAGCTATCCGTTGGATACAAACAAACAGACGGTCAGCTTTAGTCATTAGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp TCTGAACCAAGAAAGGTTGAGAGCTCCAGGTATTGTGTGGAGAACATTCTGGAGGCAGAAGCTGGAAAATaGCTTGTTTACATGCATGAA +
Preference number: 4 (lower is better)
Translates to: SEPRKVESSRYCVENILEAEAGK*LVYMHE
Trigger: TTCATGCATGTAAACAAGGCATTTTCCAGCTTCTGC...CTCCAGAATGTTCTCCACACAATACCTGGAGCTCTCAACCTTTCTTGGTTCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp TTAAGGGTTTACATTGCAGGGGGAAATGTACCTCGAGGTATTATTTTGTGTGAGCCTGTGGAGTTCCATTaGTGCACTGGATTAACACTG +
Preference number: 4 (lower is better)
Translates to: LRVYIAGGNVPRGIILCEPVEFH*CTGLTL
Trigger: CAGTGTTAATCCAGTGCAGCAATGGAACTCCACAGG...CTCACACAAAATAATACCTCGAGGTACATTTCCCCCTGCAATGTAAACCCTTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp TTAAGGGTTTACATTGCAGGGGGAAATGTACCTCGAGGTATTATTTTGTGTGAGAAAGAAGAGGCTGCATaGAGACCTCCCCTGTCAAAA +
Preference number: 4 (lower is better)
Translates to: LRVYIAGGNVPRGIILCEKEEAA*RPPLSK
Trigger: TTTTGACAGGGGAGGTCTGCATGCAGCCTCTTCTTT...CTCACACAAAATAATACCTCGAGGTACATTTCCCCCTGCAATGTAAACCCTTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp TCCCTAATGACTAAAGCTGACCGTCTGTTTGTTTGTATCCAACGGATAGCTTCTGTTAAGGGTTTACATTaGAGGGGGAAATGTACCTCG +
Preference number: 4 (lower is better)
Translates to: SLMTKADRLFVCIQRIASVKGLH*RGKCTS
Trigger: CGAGGTACATTTCCCCCTGCAATGTAAACCCTTAAC...AGAAGCTATCCGTTGGATACAAACAAACAGACGGTCAGCTTTAGTCATTAGGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp TCCCTAATGACTAAAGCTGACCGTCTGTTTGTTTGTATCCAACGGATAGCTTCTTTTGATGCCCTTTTCTaGACCTTCTGTCTAAAGGGG +
Preference number: 4 (lower is better)
Translates to: SLMTKADRLFVCIQRIASFDALF*TFCLKG
Trigger: CCCCTTTAGACAGAAGGTGCAGAAAAGGGCATCAAA...AGAAGCTATCCGTTGGATACAAACAAACAGACGGTCAGCTTTAGTCATTAGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp ACTTCACAAATTATTTACGTTTGGAATTCTGACGACTGGCCTCTGATATATACATCCTTCTTGGACCAGTaGTGGCCAGGCAGATGGGTT +
Preference number: 4 (lower is better)
Translates to: TSQIIYVWNSDDWPLIYTSFLDQ*WPGRWV
Trigger: AACCCATCTGCCTGGCCAGCACTGGTCCAAGAAGGA...TGTATATATCAGAGGCCAGTCGTCAGAATTCCAAACGTAAATAATTTGTGAAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR GCA 90 bp GGGTTTATCTTAAAGATGGGGGCGAAGGGGGTGTCTGCAAAGAAGCAATTCAAAAGACACAGGTTTACTTaGAGAACTTTCCCAATTGCT +
Preference number: 4 (lower is better)
Translates to: GFILKMGAKGVSAKKQFKRHRFT*RTFPIA
Trigger: AGCAATTGGGAAAGTTCTGCAAGTAAACCTGTGTCT...TTTGAATTGCTTCTTTGCAGACACCCCCTTCGCCCCCATCTTTAAGATAAACCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp GGATTTTTGCTGTACCTTCCTGTTACCTGTTTGTGTGCAAAGTTGGAAAGCTGCTTTAGTAACACTTTGTaGTCCTGCTGGCAACGGAAT +
Preference number: 4 (lower is better)
Translates to: GFLLYLPVTCLCAKLESCFSNTL*SCWQRN
Trigger: ATTCCGTTGCCAGCAGGACCACAAAGTGTTACTAAA...GCAGCTTTCCAACTTTGCACACAAACAGGTAACAGGAAGGTACAGCAAAAATCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp TCCCTAATGACTAAAGCTGACCGTCTGTTTGTTTGTATCCAACGGATAGCTTCTAAGGCCCACTATCTGTaGTTCCCATGTCTTTGGAAT +
Preference number: 4 (lower is better)
Translates to: SLMTKADRLFVCIQRIASKAHYL*FPCLWN
Trigger: ATTCCAAAGACATGGGAACCACAGATAGTGGGCCTT...AGAAGCTATCCGTTGGATACAAACAAACAGACGGTCAGCTTTAGTCATTAGGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp GGATTTTTGCTGTACCTTCCTGTTACCTGTTTGTGTGCAAAGTTGGAAAGCTGCCATTTTTGTGCATATTaGCTTCCTGTGTGGCTACAG +
Preference number: 4 (lower is better)
Translates to: GFLLYLPVTCLCAKLESCHFCAY*LPVWLQ
Trigger: CTGTAGCCACACAGGAAGCCAATATGCACAAAAATG...GCAGCTTTCCAACTTTGCACACAAACAGGTAACAGGAAGGTACAGCAAAAATCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp TCTGAACCAAGAAAGGTTGAGAGCTCCAGGTATTGTGTGGAGAACATTCTGGAGTCACAATTACACACCTaGAGGAATCAATGCACAGTA +
Preference number: 4 (lower is better)
Translates to: SEPRKVESSRYCVENILESQLHT*RNQCTV
Trigger: TACTGTGCATTGATTCCTCCAGGTGTGTAATTGTGA...CTCCAGAATGTTCTCCACACAATACCTGGAGCTCTCAACCTTTCTTGGTTCAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp TCCCTAATGACTAAAGCTGACCGTCTGTTTGTTTGTATCCAACGGATAGCTTCTGATTGCTGGAAGAGATaGCAGCTATTTAAGACAGGG +
Preference number: 4 (lower is better)
Translates to: SLMTKADRLFVCIQRIASDCWKR*QLFKTG
Trigger: CCCTGTCTTAAATAGCTGCCATCTCTTCCAGCAATC...AGAAGCTATCCGTTGGATACAAACAAACAGACGGTCAGCTTTAGTCATTAGGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp GGGTTTATCTTAAAGATGGGGGCGAAGGGGGTGTCTGCAAAGAAGCAATTCAAAAAAGTGACAAGGCTATaGATTCTACAGTGCAAACCA +
Preference number: 4 (lower is better)
Translates to: GFILKMGAKGVSAKKQFKKVTRL*ILQCKP
Trigger: TGGTTTGCACTGTAGAATCCATAGCCTTGTCACTTT...TTTGAATTGCTTCTTTGCAGACACCCCCTTCGCCCCCATCTTTAAGATAAACCC
43% GC, longest homopolymer 6 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp TCCCTAATGACTAAAGCTGACCGTCTGTTTGTTTGTATCCAACGGATAGCTTCTACATGGCTTTCAGGGTaGTTTGCACATCTCCTTACA +
Preference number: 4 (lower is better)
Translates to: SLMTKADRLFVCIQRIASTWLSG*FAHLLT
Trigger: TGTAAGGAGATGTGCAAACCACCCTGAAAGCCATGT...AGAAGCTATCCGTTGGATACAAACAAACAGACGGTCAGCTTTAGTCATTAGGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp TCCCTAATGACTAAAGCTGACCGTCTGTTTGTTTGTATCCAACGGATAGCTTCTTCACTGCATACACTTTaGTCACTGGTGTGTGCAAAG +
Preference number: 4 (lower is better)
Translates to: SLMTKADRLFVCIQRIASSLHTL*SLVCAK
Trigger: CTTTGCACACACCAGTGACCAAAGTGTATGCAGTGA...AGAAGCTATCCGTTGGATACAAACAAACAGACGGTCAGCTTTAGTCATTAGGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp GGATTTTTGCTGTACCTTCCTGTTACCTGTTTGTGTGCAAAGTTGGAAAGCTGCATTCAGTGTCTTTGCTaGCAATACAAGGCCACTCTT +
Preference number: 4 (lower is better)
Translates to: GFLLYLPVTCLCAKLESCIQCLC*QYKATL
Trigger: AAGAGTGGCCTTGTATTGCCAGCAAAGACACTGAAT...GCAGCTTTCCAACTTTGCACACAAACAGGTAACAGGAAGGTACAGCAAAAATCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp CCACACTCGAGACTTGCAGATGCACGTGTGACGGTGCCATTCTTCGTATATGTTTCTTCGTATATGTTCTaGTGCATCTTTAATTCAGCA +
Preference number: 4 (lower is better)
Translates to: PHSRLADARVTVPFFVYVSSYMF*CIFNSA
Trigger: TGCTGAATTAAAGATGCACCAGAACATATACGAAGA...AACATATACGAAGAATGGCACCGTCACACGTGCATCTGCAAGTCTCGAGTGTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446273.1
3UTR CAA 72 bp TTGCCCAAGACAAAGAGACTTTCCAAATCACTGCAGTaGTCACAATTACACACCTGGAGGAATCAATGCACA +
Preference number: 4 (lower is better)
Translates to: LPKTKRLSKSLQ*SQLHTWRNQCT
Trigger: TGTGCATTGATTCCTCCAGGTGTGTAATTGTGACAACTGCAGTGATTTGGAAAGTCTCTTTGTCTTGGGCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR CAA 72 bp CAGAATCTCTTCCACTCAACTCTACACTGTGCAATATaGATGCTAATGAAATCTCAACAGCTGCTCCTGGGA +
Preference number: 4 (lower is better)
Translates to: QNLFHSTLHCAI*MLMKSQQLLLG
Trigger: TCCCAGGAGCAGCTGTTGAGATTTCATTAGCATCAATATTGCACAGTGTAGAGTTGAGTGGAAGAGATTCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp GGGTTTATCTTAAAGATGGGGGCGAAGGGGGTGTCTGCAAAGAAGCAATTCAAAAAGAGGATTCATCCATaGATCATTGTTTCCTCCTTT +
Preference number: 4 (lower is better)
Translates to: GFILKMGAKGVSAKKQFKKRIHP*IIVSSF
Trigger: AAAGGAGGAAACAATGATTCATGGATGAATCCTCTT...TTTGAATTGCTTCTTTGCAGACACCCCCTTCGCCCCCATCTTTAAGATAAACCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp ATATGTTCTGGTGCATCTTTAATTCAGCAGCTGCCAGAATACTCACGGGTGCATGGATTATCTTCAGTCTaGCTCAGCAATCCCATATTT +
Preference number: 4 (lower is better)
Translates to: ICSGASLIQQLPEYSRVHGLSSV*LSNPIF
Trigger: AAATATGGGATTGCTGAGTCAGACTGAAGATAATCC...ATGCACCCGTGAGTATTCTGGCAGCTGCTGAATTAAAGATGCACCAGAACATAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR TCA 90 bp AGAATTTACTCACTACTTCACAAATTATTTACGTTTGGAATTCTGACGACTGGCAGCATGGCAATTTGTTaGGGAGATAACTGGGGCCCC +
Preference number: 4 (lower is better)
Translates to: RIYSLLHKLFTFGILTTGSMAIC*GDNWGP
Trigger: GGGGCCCCAGTTATCTCCTCAACAAATTGCCATGCT...GCCAGTCGTCAGAATTCCAAACGTAAATAATTTGTGAAGTAGTGAGTAAATTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR TCA 90 bp GGATTTTTGCTGTACCTTCCTGTTACCTGTTTGTGTGCAAAGTTGGAAAGCTGCACAAAAGGAAACGCTTaGAGTACACACTGGTTTAAG +
Preference number: 4 (lower is better)
Translates to: GFLLYLPVTCLCAKLESCTKGNA*STHWFK
Trigger: CTTAAACCAGTGTGTACTTCAAGCGTTTCCTTTTGT...GCAGCTTTCCAACTTTGCACACAAACAGGTAACAGGAAGGTACAGCAAAAATCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp TTAAGGGTTTACATTGCAGGGGGAAATGTACCTCGAGGTATTATTTTGTGTGAGCCTTCTCTAGATGTCTaGATACAAGCTGCTCTTCAC +
Preference number: 4 (lower is better)
Translates to: LRVYIAGGNVPRGIILCEPSLDV*IQAALH
Trigger: GTGAAGAGCAGCTTGTATTCAGACATCTAGAGAAGG...CTCACACAAAATAATACCTCGAGGTACATTTCCCCCTGCAATGTAAACCCTTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp TCTGAACCAAGAAAGGTTGAGAGCTCCAGGTATTGTGTGGAGAACATTCTGGAGTTTCAAAAGAATCCATaGTCGAGCTCTTACAAAGCT +
Preference number: 4 (lower is better)
Translates to: SEPRKVESSRYCVENILEFQKNP*SSSYKA
Trigger: AGCTTTGTAAGAGCTCGATCATGGATTCTTTTGAAA...CTCCAGAATGTTCTCCACACAATACCTGGAGCTCTCAACCTTTCTTGGTTCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp GGGTTTATCTTAAAGATGGGGGCGAAGGGGGTGTCTGCAAAGAAGCAATTCAAATGGAAAGGAACAAAGTaGTGGCATTCTCATCTATAT +
Preference number: 4 (lower is better)
Translates to: GFILKMGAKGVSAKKQFKWKGTK*WHSHLY
Trigger: ATATAGATGAGAATGCCATCACTTTGTTCCTTTCCA...TTTGAATTGCTTCTTTGCAGACACCCCCTTCGCCCCCATCTTTAAGATAAACCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp TCCCTAATGACTAAAGCTGACCGTCTGTTTGTTTGTATCCAACGGATAGCTTCTAAAGTTAACAGCCTATaGGCTTCTAGTTTCTGCGAG +
Preference number: 4 (lower is better)
Translates to: SLMTKADRLFVCIQRIASKVNSL*ASSFCE
Trigger: CTCGCAGAAACTAGAAGCTCATAGGCTGTTAACTTT...AGAAGCTATCCGTTGGATACAAACAAACAGACGGTCAGCTTTAGTCATTAGGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp GGATTTTTGCTGTACCTTCCTGTTACCTGTTTGTGTGCAAAGTTGGAAAGCTGCAATAGGGACCATTTCTaGAAATACACACACCTTTGG +
Preference number: 4 (lower is better)
Translates to: GFLLYLPVTCLCAKLESCNRDHF*KYTHLW
Trigger: CCAAAGGTGTGTGTATTTTCAGAAATGGTCCCTATT...GCAGCTTTCCAACTTTGCACACAAACAGGTAACAGGAAGGTACAGCAAAAATCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp TTAAGGGTTTACATTGCAGGGGGAAATGTACCTCGAGGTATTATTTTGTGTGAGTGCGTCTCTGTGAAGTaGCTCCCATTATTCACTGTT +
Preference number: 4 (lower is better)
Translates to: LRVYIAGGNVPRGIILCECVSVK*LPLFTV
Trigger: AACAGTGAATAATGGGAGTCACTTCACAGAGACGCA...CTCACACAAAATAATACCTCGAGGTACATTTCCCCCTGCAATGTAAACCCTTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp AGAATTTACTCACTACTTCACAAATTATTTACGTTTGGAATTCTGACGACTGGCCGACGGCCAGAGTTATaGCTGTCACTACTTCCTGCT +
Preference number: 4 (lower is better)
Translates to: RIYSLLHKLFTFGILTTGRRPEL*LSLLPA
Trigger: AGCAGGAAGTAGTGACAGTCATAACTCTGGCCGTCG...GCCAGTCGTCAGAATTCCAAACGTAAATAATTTGTGAAGTAGTGAGTAAATTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR GCA 90 bp TTAAGGGTTTACATTGCAGGGGGAAATGTACCTCGAGGTATTATTTTGTGTGAGCAGACCTCTCGATTGTaGTGTGCTGTTTCCAAACAA +
Preference number: 4 (lower is better)
Translates to: LRVYIAGGNVPRGIILCEQTSRL*CAVSKQ
Trigger: TTGTTTGGAAACAGCACAGCACAATCGAGAGGTCTG...CTCACACAAAATAATACCTCGAGGTACATTTCCCCCTGCAATGTAAACCCTTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp TTAAGGGTTTACATTGCAGGGGGAAATGTACCTCGAGGTATTATTTTGTGTGAGCGCCCCCTTCAGGTCTaGTATAATTCTCTTCACAAT +
Preference number: 4 (lower is better)
Translates to: LRVYIAGGNVPRGIILCERPLQV*YNSLHN
Trigger: ATTGTGAAGAGAATTATAGCAGACCTGAAGGGGGCG...CTCACACAAAATAATACCTCGAGGTACATTTCCCCCTGCAATGTAAACCCTTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp GGGTTTATCTTAAAGATGGGGGCGAAGGGGGTGTCTGCAAAGAAGCAATTCAAACCGATTGCTAACTTATaGTACATTCATGTCAGAAGA +
Preference number: 4 (lower is better)
Translates to: GFILKMGAKGVSAKKQFKPIANL*YIHVRR
Trigger: TCTTCTGACATGAATGTAGCATAAGTTAGCAATCGG...TTTGAATTGCTTCTTTGCAGACACCCCCTTCGCCCCCATCTTTAAGATAAACCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp GGATTTTTGCTGTACCTTCCTGTTACCTGTTTGTGTGCAAAGTTGGAAAGCTGCACCCCCTTTGCAGAATaGATAGTTACAATTCACCTT +
Preference number: 4 (lower is better)
Translates to: GFLLYLPVTCLCAKLESCTPFAE*IVTIHL
Trigger: AAGGTGAATTGTAACTATGCATTCTGCAAAGGGGGT...GCAGCTTTCCAACTTTGCACACAAACAGGTAACAGGAAGGTACAGCAAAAATCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp TTAAGGGTTTACATTGCAGGGGGAAATGTACCTCGAGGTATTATTTTGTGTGAGGTTAAGGGTTTACATTaGAGGGGGAAATGTACCTCG +
Preference number: 4 (lower is better)
Translates to: LRVYIAGGNVPRGIILCEVKGLH*RGKCTS
Trigger: CGAGGTACATTTCCCCCTGCAATGTAAACCCTTAAC...CTCACACAAAATAATACCTCGAGGTACATTTCCCCCTGCAATGTAAACCCTTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp TCTGAACCAAGAAAGGTTGAGAGCTCCAGGTATTGTGTGGAGAACATTCTGGAGATCTACTTCCTCTATTaGCCATCAAAGAGAGAAAAG +
Preference number: 4 (lower is better)
Translates to: SEPRKVESSRYCVENILEIYFLY*PSKREK
Trigger: CTTTTCTCTCTTTGATGGGCAATAGAGGAAGTAGAT...CTCCAGAATGTTCTCCACACAATACCTGGAGCTCTCAACCTTTCTTGGTTCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp ATATGTTCTGGTGCATCTTTAATTCAGCAGCTGCCAGAATACTCACGGGTGCATATTATCTGTTTCCAATaGCCCTTTCCTAGAAGTTCC +
Preference number: 4 (lower is better)
Translates to: ICSGASLIQQLPEYSRVHIICFQ*PFPRSS
Trigger: GGAACTTCTAGGAAAGGGGCATTGGAAACAGATAAT...ATGCACCCGTGAGTATTCTGGCAGCTGCTGAATTAAAGATGCACCAGAACATAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR GCA 90 bp GGATTTTTGCTGTACCTTCCTGTTACCTGTTTGTGTGCAAAGTTGGAAAGCTGCCATTGTTTCCAGAATTaGTTTGTCCAGAGACTGTGT +
Preference number: 4 (lower is better)
Translates to: GFLLYLPVTCLCAKLESCHCFQN*FVQRLC
Trigger: ACACAGTCTCTGGACAAAGCAATTCTGGAAACAATG...GCAGCTTTCCAACTTTGCACACAAACAGGTAACAGGAAGGTACAGCAAAAATCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp TTAAGGGTTTACATTGCAGGGGGAAATGTACCTCGAGGTATTATTTTGTGTGAGGGAATTTGTGGAAGCTaGCTCAGCATGGCAATTTGT +
Preference number: 4 (lower is better)
Translates to: LRVYIAGGNVPRGIILCEGICGS*LSMAIC
Trigger: ACAAATTGCCATGCTGAGCCAGCTTCCACAAATTCC...CTCACACAAAATAATACCTCGAGGTACATTTCCCCCTGCAATGTAAACCCTTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp TTAAGGGTTTACATTGCAGGGGGAAATGTACCTCGAGGTATTATTTTGTGTGAGAGTATCTTACATCTGTaGAGTGACTGGACCACACAC +
Preference number: 4 (lower is better)
Translates to: LRVYIAGGNVPRGIILCESILHL*SDWTTH
Trigger: GTGTGTGGTCCAGTCACTCCACAGATGTAAGATACT...CTCACACAAAATAATACCTCGAGGTACATTTCCCCCTGCAATGTAAACCCTTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp TCCCTAATGACTAAAGCTGACCGTCTGTTTGTTTGTATCCAACGGATAGCTTCTAGAGAAAAACAGGCTTaGCGTAAGCATTTTGCTCAG +
Preference number: 4 (lower is better)
Translates to: SLMTKADRLFVCIQRIASREKQA*RKHFAQ
Trigger: CTGAGCAAAATGCTTACGCCAAGCCTGTTTTTCTCT...AGAAGCTATCCGTTGGATACAAACAAACAGACGGTCAGCTTTAGTCATTAGGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp TCTGAACCAAGAAAGGTTGAGAGCTCCAGGTATTGTGTGGAGAACATTCTGGAGAAATCAGAAGGTGGGTaGATAATATGCATGCACTTA +
Preference number: 4 (lower is better)
Translates to: SEPRKVESSRYCVENILEKSEGG*IICMHL
Trigger: TAAGTGCATGCATATTATCCACCCACCTTCTGATTT...CTCCAGAATGTTCTCCACACAATACCTGGAGCTCTCAACCTTTCTTGGTTCAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp TCCCTAATGACTAAAGCTGACCGTCTGTTTGTTTGTATCCAACGGATAGCTTCTAGATGGGTTGCTATTTaGGTTAAAGTTGCTGAAGCC +
Preference number: 4 (lower is better)
Translates to: SLMTKADRLFVCIQRIASRWVAI*VKVAEA
Trigger: GGCTTCAGCAACTTTAACCCAAATAGCAACCCATCT...AGAAGCTATCCGTTGGATACAAACAAACAGACGGTCAGCTTTAGTCATTAGGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp AGAATTTACTCACTACTTCACAAATTATTTACGTTTGGAATTCTGACGACTGGCCTAGAAGTTCCTTCTTaGACCAGTGCTGGCCAGGCA +
Preference number: 4 (lower is better)
Translates to: RIYSLLHKLFTFGILTTGLEVPS*TSAGQA
Trigger: TGCCTGGCCAGCACTGGTCCAAGAAGGAACTTCTAG...GCCAGTCGTCAGAATTCCAAACGTAAATAATTTGTGAAGTAGTGAGTAAATTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR CCA 90 bp AATTCAGCAGCTGCCAGAATACTCACGGGTGCATCTTCATGCATGTTTGTCTACCAAATTATTTACGTTTaGAATTCTGACGACTGGCCT +
Preference number: 4 (lower is better)
Translates to: NSAAARILTGASSCMFVYQIIYV*NSDDWP
Trigger: AGGCCAGTCGTCAGAATTCCAAACGTAAATAATTTG...GTAGACAAACATGCATGAAGATGCACCCGTGAGTATTCTGGCAGCTGCTGAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446273.1
3UTR CAA 72 bp TACCATATTCAACCCACAGGAGTTTGGAAGAACCGATaGCTAACTTATGCTACATTCATGTCAGAAGAGGTG +
Preference number: 4 (lower is better)
Translates to: YHIQPTGVWKNR*LTYATFMSEEV
Trigger: CACCTCTTCTGACATGAATGTAGCATAAGTTAGCAATCGGTTCTTCCAAACTCCTGTGGGTTGAATATGGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR CAA 72 bp TACAACAGCATCATAAGCCACCTTGACAACTTTCTTTaGCAGCTTACTGTGAGCAGTAAAGAGGAATTTCCC +
Preference number: 4 (lower is better)
Translates to: YNSIISHLDNFL*QLTVSSKEEFP
Trigger: GGGAAATTCCTCTTTACTGCTCACAGTAAGCTGCAAAAGAAAGTTGTCAAGGTGGCTTATGATGCTGTTGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR CAA 72 bp TTGTTTCTGCTGACAGTGTTTCAGATGAGAGGATTTTaGCTGTACCTTCCTGTTACCTGTTTGTGTGCAAAG +
Preference number: 4 (lower is better)
Translates to: LFLLTVFQMRGF*LYLPVTCLCAK
Trigger: CTTTGCACACAAACAGGTAACAGGAAGGTACAGCAAAAATCCTCTCATCTGAAACACTGTCAGCAGAAACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp TCTGACGACTGGCCTCTGATATATACAGGACAATCCAAGCTTTGGTGGAAAAGAAAGAGGATTCATCCATaGATCATTGTTTCCTCCTTT +
Preference number: 4 (lower is better)
Translates to: SDDWPLIYTGQSKLWWKRKRIHP*IIVSSF
Trigger: AAAGGAGGAAACAATGATTCATGGATGAATCCTCTT...TCTTTTCCACCAAAGCTTGGATTGTCCTGTATATATCAGAGGCCAGTCGTCAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR TCA 90 bp TCCCTAATGACTAAAGCTGACCGTCTGTTTGTTTGTATCCAACGGATAGCTTCTGGATTATCTTCAGTCTaGCTCAGCAATCCCATATTT +
Preference number: 4 (lower is better)
Translates to: SLMTKADRLFVCIQRIASGLSSV*LSNPIF
Trigger: AAATATGGGATTGCTGAGTCAGACTGAAGATAATCC...AGAAGCTATCCGTTGGATACAAACAAACAGACGGTCAGCTTTAGTCATTAGGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp TCCCTAATGACTAAAGCTGACCGTCTGTTTGTTTGTATCCAACGGATAGCTTCTATCAGAGATGTTACATaGGCCATCCATTTCTTCACA +
Preference number: 4 (lower is better)
Translates to: SLMTKADRLFVCIQRIASIRDVT*AIHFFT
Trigger: TGTGAAGAAATGGATGGCTCATGTAACATCTCTGAT...AGAAGCTATCCGTTGGATACAAACAAACAGACGGTCAGCTTTAGTCATTAGGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp TTAAGGGTTTACATTGCAGGGGGAAATGTACCTCGAGGTATTATTTTGTGTGAGGTCACAGTGAAGAACTaGAGACTGAGCTTTTTGCAA +
Preference number: 4 (lower is better)
Translates to: LRVYIAGGNVPRGIILCEVTVKN*RLSFLQ
Trigger: TTGCAAAAAGCTCAGTCTTCAGTTCTTCACTGTGAC...CTCACACAAAATAATACCTCGAGGTACATTTCCCCCTGCAATGTAAACCCTTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp TCCCTAATGACTAAAGCTGACCGTCTGTTTGTTTGTATCCAACGGATAGCTTCTCTGAAAAGGGCTTCTTaGCTAGTAAAGGGTTTATCT +
Preference number: 4 (lower is better)
Translates to: SLMTKADRLFVCIQRIASLKRAS*LVKGLS
Trigger: AGATAAACCCTTTACTAGTCAAGAAGCCCTTTTCAG...AGAAGCTATCCGTTGGATACAAACAAACAGACGGTCAGCTTTAGTCATTAGGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp ACTTCACAAATTATTTACGTTTGGAATTCTGACGACTGGCCTCTGATATATACATTGCAGATGCACGTGTaGCGGTGCCATTCTTCGTAT +
Preference number: 4 (lower is better)
Translates to: TSQIIYVWNSDDWPLIYTLQMHV*RCHSSY
Trigger: ATACGAAGAATGGCACCGTCACACGTGCATCTGCAA...TGTATATATCAGAGGCCAGTCGTCAGAATTCCAAACGTAAATAATTTGTGAAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR GCA 90 bp GGATTTTTGCTGTACCTTCCTGTTACCTGTTTGTGTGCAAAGTTGGAAAGCTGCCAGACAAATCCATTTTaGTGCTTGGATTATCTTCAG +
Preference number: 4 (lower is better)
Translates to: GFLLYLPVTCLCAKLESCQTNPF*CLDYLQ
Trigger: CTGAAGATAATCCAAGCAGCAAAATGGATTTGTCTG...GCAGCTTTCCAACTTTGCACACAAACAGGTAACAGGAAGGTACAGCAAAAATCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp TTAAGGGTTTACATTGCAGGGGGAAATGTACCTCGAGGTATTATTTTGTGTGAGCAAATATTAGGGGTATaGCACAATCACTCGGGATCT +
Preference number: 4 (lower is better)
Translates to: LRVYIAGGNVPRGIILCEQILGV*HNHSGS
Trigger: AGATCCCGAGTGATTGTGGCATACCCCTAATATTTG...CTCACACAAAATAATACCTCGAGGTACATTTCCCCCTGCAATGTAAACCCTTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp GGGTTTATCTTAAAGATGGGGGCGAAGGGGGTGTCTGCAAAGAAGCAATTCAAACTCAACTCTACACTGTaGAATATTGATGCTAATGAA +
Preference number: 4 (lower is better)
Translates to: GFILKMGAKGVSAKKQFKLNSTL*NIDANE
Trigger: TTCATTAGCATCAATATTGCACAGTGTAGAGTTGAG...TTTGAATTGCTTCTTTGCAGACACCCCCTTCGCCCCCATCTTTAAGATAAACCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp GGATTTTTGCTGTACCTTCCTGTTACCTGTTTGTGTGCAAAGTTGGAAAGCTGCATCTACTTCCTCTATTaGCCATCAAAGAGAGAAAAG +
Preference number: 4 (lower is better)
Translates to: GFLLYLPVTCLCAKLESCIYFLY*PSKREK
Trigger: CTTTTCTCTCTTTGATGGGCAATAGAGGAAGTAGAT...GCAGCTTTCCAACTTTGCACACAAACAGGTAACAGGAAGGTACAGCAAAAATCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp TCCCTAATGACTAAAGCTGACCGTCTGTTTGTTTGTATCCAACGGATAGCTTCTATTATCTGTTTCCAATaGCCCTTTCCTAGAAGTTCC +
Preference number: 4 (lower is better)
Translates to: SLMTKADRLFVCIQRIASIICFQ*PFPRSS
Trigger: GGAACTTCTAGGAAAGGGGCATTGGAAACAGATAAT...AGAAGCTATCCGTTGGATACAAACAAACAGACGGTCAGCTTTAGTCATTAGGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp TTAAGGGTTTACATTGCAGGGGGAAATGTACCTCGAGGTATTATTTTGTGTGAGATCAGCAAAGCCCTTTaGGAGCATTGTACAAGAGAT +
Preference number: 4 (lower is better)
Translates to: LRVYIAGGNVPRGIILCEISKAL*EHCTRD
Trigger: ATCTCTTGTACAATGCTCCCAAAGGGCTTTGCTGAT...CTCACACAAAATAATACCTCGAGGTACATTTCCCCCTGCAATGTAAACCCTTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp AGAATTTACTCACTACTTCACAAATTATTTACGTTTGGAATTCTGACGACTGGCTTGTCATTAGAGTCCTaGGGGCCAAAGTTCCAGGAC +
Preference number: 4 (lower is better)
Translates to: RIYSLLHKLFTFGILTTGLSLES*GPKFQD
Trigger: GTCCTGGAACTTTGGCCCCCAGGACTCTAATGACAA...GCCAGTCGTCAGAATTCCAAACGTAAATAATTTGTGAAGTAGTGAGTAAATTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR TCA 90 bp ACTTCACAAATTATTTACGTTTGGAATTCTGACGACTGGCCTCTGATATATACATGTTGGGAAACTGCTTaGGCATTGAGGCAGAAACCT +
Preference number: 4 (lower is better)
Translates to: TSQIIYVWNSDDWPLIYTCWETA*ALRQKP
Trigger: AGGTTTCTGCCTCAATGCTCAAGCAGTTTCCCAACA...TGTATATATCAGAGGCCAGTCGTCAGAATTCCAAACGTAAATAATTTGTGAAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR TCA 90 bp TTAAGGGTTTACATTGCAGGGGGAAATGTACCTCGAGGTATTATTTTGTGTGAGAACATCACCAAAAACTaGAAGGAAACACTCCACATC +
Preference number: 4 (lower is better)
Translates to: LRVYIAGGNVPRGIILCENITKN*KETLHI
Trigger: GATGTGGAGTGTTTCCTTTCAGTTTTTGGTGATGTT...CTCACACAAAATAATACCTCGAGGTACATTTCCCCCTGCAATGTAAACCCTTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp TCCCTAATGACTAAAGCTGACCGTCTGTTTGTTTGTATCCAACGGATAGCTTCTGTTATGACAAGAGACTaGCAGCTTAAAAACTACTCA +
Preference number: 4 (lower is better)
Translates to: SLMTKADRLFVCIQRIASVMTRD*QLKNYS
Trigger: TGAGTAGTTTTTAAGCTGTCAGTCTCTTGTCATAAC...AGAAGCTATCCGTTGGATACAAACAAACAGACGGTCAGCTTTAGTCATTAGGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp TCCCTAATGACTAAAGCTGACCGTCTGTTTGTTTGTATCCAACGGATAGCTTCTAATAAAATTCCAAGGTaGACAGTGCCCAAATCAGAA +
Preference number: 4 (lower is better)
Translates to: SLMTKADRLFVCIQRIASNKIPR*TVPKSE
Trigger: TTCTGATTTGGGCACTGTTCACCTTGGAATTTTATT...AGAAGCTATCCGTTGGATACAAACAAACAGACGGTCAGCTTTAGTCATTAGGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp AGAATTTACTCACTACTTCACAAATTATTTACGTTTGGAATTCTGACGACTGGCCGCATTTTCCATCTTTaGCTGCTGTTCCCTGGATGT +
Preference number: 4 (lower is better)
Translates to: RIYSLLHKLFTFGILTTGRIFHL*LLFPGC
Trigger: ACATCCAGGGAACAGCAGTCAAAGATGGAAAATGCG...GCCAGTCGTCAGAATTCCAAACGTAAATAATTTGTGAAGTAGTGAGTAAATTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR GCA 90 bp TTAAGGGTTTACATTGCAGGGGGAAATGTACCTCGAGGTATTATTTTGTGTGAGTCGCTAAGTTATACCTaGCTAAGCAAAACCACATAC +
Preference number: 4 (lower is better)
Translates to: LRVYIAGGNVPRGIILCESLSYT*LSKTTY
Trigger: GTATGTGGTTTTGCTTAGGCAGGTATAACTTAGCGA...CTCACACAAAATAATACCTCGAGGTACATTTCCCCCTGCAATGTAAACCCTTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp TCCCTAATGACTAAAGCTGACCGTCTGTTTGTTTGTATCCAACGGATAGCTTCTCCGATTGCTAACTTATaGTACATTCATGTCAGAAGA +
Preference number: 4 (lower is better)
Translates to: SLMTKADRLFVCIQRIASPIANL*YIHVRR
Trigger: TCTTCTGACATGAATGTAGCATAAGTTAGCAATCGG...AGAAGCTATCCGTTGGATACAAACAAACAGACGGTCAGCTTTAGTCATTAGGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp GGATTTTTGCTGTACCTTCCTGTTACCTGTTTGTGTGCAAAGTTGGAAAGCTGCAATGCCTTGTTTACATaGATGAATGTGTCACAAGTA +
Preference number: 4 (lower is better)
Translates to: GFLLYLPVTCLCAKLESCNALFT*MNVSQV
Trigger: TACTTGTGACACATTCATGCATGTAAACAAGGCATT...GCAGCTTTCCAACTTTGCACACAAACAGGTAACAGGAAGGTACAGCAAAAATCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp TCCCTAATGACTAAAGCTGACCGTCTGTTTGTTTGTATCCAACGGATAGCTTCTTACTGTGCTAACCTGTaGACTGGAATTACTATTATC +
Preference number: 4 (lower is better)
Translates to: SLMTKADRLFVCIQRIASYCANL*TGITII
Trigger: GATAATAGTAATTCCAGTGCACAGGTTAGCACAGTA...AGAAGCTATCCGTTGGATACAAACAAACAGACGGTCAGCTTTAGTCATTAGGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp AGAATTTACTCACTACTTCACAAATTATTTACGTTTGGAATTCTGACGACTGGCTCTTTCGATCTCCAGTaGTTTGTGAAGGGGCATCAG +
Preference number: 4 (lower is better)
Translates to: RIYSLLHKLFTFGILTTGSFDLQ*FVKGHQ
Trigger: CTGATGCCCCTTCACAAAGCACTGGAGATCGAAAGA...GCCAGTCGTCAGAATTCCAAACGTAAATAATTTGTGAAGTAGTGAGTAAATTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR CCA 90 bp AGAATTTACTCACTACTTCACAAATTATTTACGTTTGGAATTCTGACGACTGGCTGTTGGAGAGATGAGTaGGGTTGTGTCCTATGGGAT +
Preference number: 4 (lower is better)
Translates to: RIYSLLHKLFTFGILTTGCWRDE*GCVLWD
Trigger: ATCCCATAGGACACAACCCCACTCATCTCTCCAACA...GCCAGTCGTCAGAATTCCAAACGTAAATAATTTGTGAAGTAGTGAGTAAATTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR CCA 90 bp TTAAGGGTTTACATTGCAGGGGGAAATGTACCTCGAGGTATTATTTTGTGTGAGACACAGGAAGGAACTTaGCATTCTACATTACTGAGA +
Preference number: 4 (lower is better)
Translates to: LRVYIAGGNVPRGIILCETQEGT*HSTLLR
Trigger: TCTCAGTAATGTAGAATGCCAAGTTCCTTCCTGTGT...CTCACACAAAATAATACCTCGAGGTACATTTCCCCCTGCAATGTAAACCCTTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp TTAAGGGTTTACATTGCAGGGGGAAATGTACCTCGAGGTATTATTTTGTGTGAGTCATGTCAGAAGAGGTaGGAAAATTCTTACAACAGG +
Preference number: 4 (lower is better)
Translates to: LRVYIAGGNVPRGIILCESCQKR*ENSYNR
Trigger: CCTGTTGTAAGAATTTTCCCACCTCTTCTGACATGA...CTCACACAAAATAATACCTCGAGGTACATTTCCCCCTGCAATGTAAACCCTTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp ACTTCACAAATTATTTACGTTTGGAATTCTGACGACTGGCCTCTGATATATACACGTCTCATTCCATGCTaGGGATCTTTTGCAATCCTC +
Preference number: 4 (lower is better)
Translates to: TSQIIYVWNSDDWPLIYTRLIPC*GSFAIL
Trigger: GAGGATTGCAAAAGATCCCCAGCATGGAATGAGACG...TGTATATATCAGAGGCCAGTCGTCAGAATTCCAAACGTAAATAATTTGTGAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR TCA 90 bp TTAAGGGTTTACATTGCAGGGGGAAATGTACCTCGAGGTATTATTTTGTGTGAGAAGAGGATTCATCCATaGATCATTGTTTCCTCCTTT +
Preference number: 4 (lower is better)
Translates to: LRVYIAGGNVPRGIILCEKRIHP*IIVSSF
Trigger: AAAGGAGGAAACAATGATTCATGGATGAATCCTCTT...CTCACACAAAATAATACCTCGAGGTACATTTCCCCCTGCAATGTAAACCCTTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp TTAAGGGTTTACATTGCAGGGGGAAATGTACCTCGAGGTATTATTTTGTGTGAGAATTTCCTTTATGGGTaGGTATCTTACATCTGTGGA +
Preference number: 4 (lower is better)
Translates to: LRVYIAGGNVPRGIILCENFLYG*VSYICG
Trigger: TCCACAGATGTAAGATACTCACCCATAAAGGAAATT...CTCACACAAAATAATACCTCGAGGTACATTTCCCCCTGCAATGTAAACCCTTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR GCA 90 bp TCCCTAATGACTAAAGCTGACCGTCTGTTTGTTTGTATCCAACGGATAGCTTCTCTCAACTCTACACTGTaGAATATTGATGCTAATGAA +
Preference number: 4 (lower is better)
Translates to: SLMTKADRLFVCIQRIASLNSTL*NIDANE
Trigger: TTCATTAGCATCAATATTGCACAGTGTAGAGTTGAG...AGAAGCTATCCGTTGGATACAAACAAACAGACGGTCAGCTTTAGTCATTAGGGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
3UTR CAA 72 bp GTGAGCAGGTTAGGGAGGGTCGATGTTGAATTTTTATaGTTATTACTATGTTCACAGATTCTTGGAGCTGAT +
Preference number: 4 (lower is better)
Translates to: VSRLGRVDVEFL*LLLCSQILGAD
Trigger: ATCAGCTCCAAGAATCTGTGAACATAGTAATAACAATAAAAATTCAACATCGACCCTCCCTAACCTGCTCAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR TCA 90 bp AGAATTTACTCACTACTTCACAAATTATTTACGTTTGGAATTCTGACGACTGGCTTACGTTTGGAATTCTaGCGACTGGCCTCTGATATA +
Preference number: 4 (lower is better)
Translates to: RIYSLLHKLFTFGILTTGLRLEF*RLASDI
Trigger: TATATCAGAGGCCAGTCGTCAGAATTCCAAACGTAA...GCCAGTCGTCAGAATTCCAAACGTAAATAATTTGTGAAGTAGTGAGTAAATTCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR CCA 90 bp TTAAGGGTTTACATTGCAGGGGGAAATGTACCTCGAGGTATTATTTTGTGTGAGGGTCAAAATGGAATCTaGCTGTTAACCTTACAAAAA +
Preference number: 4 (lower is better)
Translates to: LRVYIAGGNVPRGIILCEGQNGI*LLTLQK
Trigger: TTTTTGTAAGGTTAACAGCCAGATTCCATTTTGACC...CTCACACAAAATAATACCTCGAGGTACATTTCCCCCTGCAATGTAAACCCTTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CCA 90 bp ACTTCACAAATTATTTACGTTTGGAATTCTGACGACTGGCCTCTGATATATACAGTGCTAGAATTTGGTTaGTTTGGACCACTCCATTCT +
Preference number: 4 (lower is better)
Translates to: TSQIIYVWNSDDWPLIYTVLEFG*FGPLHS
Trigger: AGAATGGAGTGGTCCAAACCAACCAAATTCTAGCAC...TGTATATATCAGAGGCCAGTCGTCAGAATTCCAAACGTAAATAATTTGTGAAGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR CCA 90 bp ACTTCACAAATTATTTACGTTTGGAATTCTGACGACTGGCCTCTGATATATACATGGAATTCTGACGACTaGCCTCTGATATATACAGGA +
Preference number: 4 (lower is better)
Translates to: TSQIIYVWNSDDWPLIYTWNSDD*PLIYTG
Trigger: TCCTGTATATATCAGAGGCCAGTCGTCAGAATTCCA...TGTATATATCAGAGGCCAGTCGTCAGAATTCCAAACGTAAATAATTTGTGAAGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446273.1
3UTR CAA 72 bp GATCATAAGGAAAGAGGGAACAAAGTTTCTCTGTTTTaGAGACATCGCATCATCAAAAGTTATCTTCCGTTC +
Preference number: 4 (lower is better)
Translates to: DHKERGNKVSLF*RHRIIKSYLPF
Trigger: GAACGGAAGATAACTTTTGATGATGCGATGTCTCAAAAACAGAGAAACTTTGTTCCCTCTTTCCTTATGATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS TCA 90 bp GCACACAGGCCGGGACGCTGCGCAGGGACCCGAGGATCCGAGGCCTaGCGCCTCCCTCTGCCACCGCCAGCCAGGGGCGGACGCGCCTCC +
Preference number: 5 (lower is better)
Translates to: AHRPGRCAGTRGSEA*RLPLPPPARGGRAS
Trigger: GGAGGCGCGTCCGCCCCTGGCTGGCGGTGGCAGAGGGAGGCGTCAGGCCTCGGATCCTCGGGTCCCTGCGCAGCGTCCCGGCCTGTGTGC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402203.5
CDS TCA 90 bp CAACCCGCCGAGCCGTGCCGGCTCCGAGTGCGCGGCGTTTCGCTGTaGGGCGAGGCGCGCAGTCTCCGCTTCTCCGCAGACTATGGAGGC +
Preference number: 5 (lower is better)
Translates to: QPAEPCRLRVRGVSL*GEARSLRFSADYGG
Trigger: GCCTCCATAGTCTGCGGAGAAGCGGAGACTGCGCGCCTCGCCTCACAGCGAAACGCCGCGCACTCGGAGCCGGCACGGCTCGGCGGGTTG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301923.13
ENST00000441751.5
CDS-3UTR CAA 90 bp GATCTGGTCCCGGTGGCCACACGCATGCGGGCAGTGTGGGTGCTGAGCTGCTGGTGTAGCGGGCGGCGCTaGGCGGTTGTCCGTTCGGCA +
Preference number: 5 (lower is better)
Translates to: DLVPVATRMRAVWVLSCWCSGRR*AVVRSA
Trigger: TGCCGAACGGACAACCGCCAAGCGCCGCCCGCTACA...CCAGCAGCTCAGCACCCACACTGCCCGCATGCGTGTGGCCACCGGGACCAGATC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS GCA 90 bp TGCGTTGTTTGGGTTTGCTCCAGGTGCTGTGCAGGGAGGAGGCCCTaGCCCACCCCCAAGGAGCATGCAGGACGGTGGAGGGGGCTGCCC +
Preference number: 5 (lower is better)
Translates to: CVVWVCSRCCAGRRP*PTPKEHAGRWRGLP
Trigger: GGGCAGCCCCCTCCACCGTCCTGCATGCTCCTTGGGGGTGGGGCAGGGCCTCCTCCCTGCACAGCACCTGGAGCAAACCCAAACAACGCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000402203.5
ENST00000454349.7
CDS GCA 90 bp GCAGGTCCCACGGGATCTGACTGGTTCTGGCCGGTCTCCAGCGACTaGCACCCCGCAGCTGGCGCACTTGGGGTTGCTGCAGGTGTAGGG +
Preference number: 5 (lower is better)
Translates to: AGPTGSDWFWPVSSD*HPAAGALGVAAGVG
Trigger: CCCTACACCTGCAGCAACCCCAAGTGCGCCAGCTGCGGGGTGGCAGTCGCTGGAGACCGGCCAGAACCAGTCAGATCCCGTGGGACCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000402203.5
ENST00000454349.7
CDS CCA 90 bp ACGGAATCGCGGCGGCACCTCCCGAGGCATGTAGCGGGCGGCGCTTaGCGGTTGTCCGTTCGGCACTGCCACCCTTTTGGCATTGTTGCC +
Preference number: 5 (lower is better)
Translates to: TESRRHLPRHVAGGA*RLSVRHCHPFGIVA
Trigger: GGCAACAATGCCAAAAGGGTGGCAGTGCCGAACGGACAACCGCCAAGCGCCGCCCGCTACATGCCTCGGGAGGTGCCGCCGCGATTCCGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000402203.5
ENST00000454349.7
CDS CCA 90 bp GTTCTGGCCGGTCTCCAGCGACTGCCACCCCGCAGCTGGCGCACTTaGGGTTGCTGCAGGTGTAGGGGGCTGAGCTTGTGCCAGAAAGCG +
Preference number: 5 (lower is better)
Translates to: VLAGLQRLPPRSWRT*GCCRCRGLSLCQKA
Trigger: CGCTTTCTGGCACAAGCTCAGCCCCCTACACCTGCAGCAACCCCAAGTGCGCCAGCTGCGGGGTGGCAGTCGCTGGAGACCGGCCAGAAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000402203.5
ENST00000454349.7
CDS CCA 90 bp CCAGCTGGAATTGGAAGGTCGAACGTTGCCTGGAGGTGGTGGGGGTaGGCCTCCCCACGAACCAGAAGCCTCTGGTTGTGGTGGCGGCGG +
Preference number: 5 (lower is better)
Translates to: PAGIGRSNVAWRWWG*ASPRTRSLWLWWRR
Trigger: CCGCCGCCACCACAACCAGAGGCTTCTGGTTCGTGGGGAGGCCCACCCCCACCACCTCCAGGCAACGTTCGACCTTCCAATTCCAGCTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335727.13
ENST00000446273.1
ENST00000454349.7
CDS CCA 90 bp CTGTGGCCCGCTGCTCCAGCTGGAATTGGAAGGTCGAACGTTGCCTaGAGGTGGTGGGGGTGGGCCTCCCCACGAACCAGAAGCCTCTGG +
Preference number: 5 (lower is better)
Translates to: LWPAAPAGIGRSNVA*RWWGWASPRTRSLW
Trigger: CCAGAGGCTTCTGGTTCGTGGGGAGGCCCACCCCCACCACCTCCAGGCAACGTTCGACCTTCCAATTCCAGCTGGAGCAGCGGGCCACAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335727.13
ENST00000446273.1
ENST00000454349.7
CDS-3UTR CAA 90 bp GATCTGGTCCCGGTGGCCACACGCATGCGGGCAGTGTGGGTGCTGAGCTGCTGGATGGAGAGCTGCCAATaGGGCTGGCGGCCGTTGGTT +
Preference number: 5 (lower is better)
Translates to: DLVPVATRMRAVWVLSCWMESCQ*GWRPLV
Trigger: AACCAACGGCCGCCAGCCCAATTGGCAGCTCTCCAT...CCAGCAGCTCAGCACCCACACTGCCCGCATGCGTGTGGCCACCGGGACCAGATC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp GTATGCCACAATCACTCGGGATCTGGTCCCGGTGGCCACACGCATGCGGGCAGTTGTAGCGGGCGGCGCTaGGCGGTTGTCCGTTCGGCA +
Preference number: 5 (lower is better)
Translates to: VCHNHSGSGPGGHTHAGSCSGRR*AVVRSA
Trigger: TGCCGAACGGACAACCGCCAAGCGCCGCCCGCTACA...ACTGCCCGCATGCGTGTGGCCACCGGGACCAGATCCCGAGTGATTGTGGCATAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp GATCTGGTCCCGGTGGCCACACGCATGCGGGCAGTGTGGGTGCTGAGCTGCTGGGCGTTGGGTACCATGTaGTCCAGATGCGGCTTGGGC +
Preference number: 5 (lower is better)
Translates to: DLVPVATRMRAVWVLSCWALGTM*SRCGLG
Trigger: GCCCAAGCCGCATCTGGACAACATGGTACCCAACGC...CCAGCAGCTCAGCACCCACACTGCCCGCATGCGTGTGGCCACCGGGACCAGATC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS GCA 90 bp CCAGATGCGGCTTGGGCCCAACAGGATGAGAGGGCGAGTGCTTCATaGCTGGCTGCCTCTGCTGCTGCTGCTGCTGCTGCTGCAGTGCAC +
Preference number: 5 (lower is better)
Translates to: PDAAWAQQDERASAS*LAASAAAAAAAAVH
Trigger: GTGCACTGCAGCAGCAGCAGCAGCAGCAGCAGAGGCAGCCAGGCATGAAGCACTCGCCCTCTCATCCTGTTGGGCCCAAGCCGCATCTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000402203.5
ENST00000446273.1
ENST00000454349.7
ENST00000467658.1
CDS-3UTR CAA 90 bp AACTGCAGGCCCCCTGGAATTTACCTGGCCATCAGACCTGCCAGCAACAGTGGCCCCTCCCGTTTCGCCTaGCAGCAGCACGGGGACCCC +
Preference number: 5 (lower is better)
Translates to: NCRPPGIYLAIRPASNSGPSRFA*QQHGDP
Trigger: GGGGTCCCCGTGCTGCTGCAAGGCGAAACGGGAGGG...GCCACTGTTGCTGGCAGGTCTGATGGCCAGGTAAATTCCAGGGGGCCTGCAGTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000301923.13
CDS-3UTR CAA 90 bp AACTGCAGGCCCCCTGGAATTTACCTGGCCATCAGACCTGCCAGCAACAGTGGCGGCGGCGCTTGGCGGTaGTCCGTTCGGCACTGCCAC +
Preference number: 5 (lower is better)
Translates to: NCRPPGIYLAIRPASNSGGGAWR*SVRHCH
Trigger: GTGGCAGTGCCGAACGGACAACCGCCAAGCGCCGCC...GCCACTGTTGCTGGCAGGTCTGATGGCCAGGTAAATTCCAGGGGGCCTGCAGTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp GATCTGGTCCCGGTGGCCACACGCATGCGGGCAGTGTGGGTGCTGAGCTGCTGGCTCCTTGTCCCCAGCTaGCTGAGTTGTGGGAGGAAG +
Preference number: 5 (lower is better)
Translates to: DLVPVATRMRAVWVLSCWLLVPS*LSCGRK
Trigger: CTTCCTCCCACAACTCAGCAAGCTGGGGACAAGGAG...CCAGCAGCTCAGCACCCACACTGCCCGCATGCGTGTGGCCACCGGGACCAGATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp GATCTGGTCCCGGTGGCCACACGCATGCGGGCAGTGTGGGTGCTGAGCTGCTGGAGCCAGCTGCTGCTCTaGCTGTTGGCGTACAGCTTG +
Preference number: 5 (lower is better)
Translates to: DLVPVATRMRAVWVLSCWSQLLL*LLAYSL
Trigger: CAAGCTGTACGCCAACAGCAAGAGCAGCAGCTGGCT...CCAGCAGCTCAGCACCCACACTGCCCGCATGCGTGTGGCCACCGGGACCAGATC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS TCA 90 bp CCCAGTGGACCCACCAAAAAGATTCAGAGCAGGTCCCACGGGATCTaGCTGGTTCTGGCCGGTCTCCAGCGACTGCCACCCCGCAGCTGG +
Preference number: 5 (lower is better)
Translates to: PSGPTKKIQSRSHGI*LVLAGLQRLPPRSW
Trigger: CCAGCTGCGGGGTGGCAGTCGCTGGAGACCGGCCAGAACCAGTCAGATCCCGTGGGACCTGCTCTGAATCTTTTTGGTGGGTCCACTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000402203.5
ENST00000454349.7
CDS GCA 90 bp CCGAGGCATGTAGCGGGCGGCGCTTGGCGGTTGTCCGTTCGGCACTaGCACCCTTTTGGCATTGTTGCCACCATTGACTGGTGGCGATGG +
Preference number: 5 (lower is better)
Translates to: PRHVAGGAWRLSVRH*HPFGIVATIDWWRW
Trigger: CCATCGCCACCAGTCAATGGTGGCAACAATGCCAAAAGGGTGGCAGTGCCGAACGGACAACCGCCAAGCGCCGCCCGCTACATGCCTCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000402203.5
ENST00000454349.7
CDS GCA 90 bp GAGGGCGAGTGCTTCATGCCTGGCTGCCTCTGCTGCTGCTGCTGCTaGTGCTGCAGTGCACTCACCATTCGAGCCAGCTGCTGCTCTTGC +
Preference number: 5 (lower is better)
Translates to: EGECFMPGCLCCCCC*CCSALTIRASCCSC
Trigger: GCAAGAGCAGCAGCTGGCTCGAATGGTGAGTGCACTGCAGCAGCAGCAGCAGCAGCAGCAGAGGCAGCCAGGCATGAAGCACTCGCCCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000402203.5
ENST00000446273.1
ENST00000454349.7
ENST00000467658.1
CDS CCA 90 bp GCTTCATGGCATTGGGAGCGTTGGCGGGCGTGTTCCCCCAGCCTGTaGTCGATGCTCCTGTATCATCCATCTCGCCCCACCCAGGACTGC +
Preference number: 5 (lower is better)
Translates to: ASWHWERWRACSPSL*SMLLYHPSRPTQDC
Trigger: GCAGTCCTGGGTGGGGCGAGATGGATGATACAGGAGCATCGACCACAGGCTGGGGGAACACGCCCGCCAACGCTCCCAATGCCATGAAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000301923.13
ENST00000402203.5
ENST00000446273.1
ENST00000454349.7
CDS CCA 90 bp ATGCGGCTTGGGCCCAACAGGATGAGAGGGCGAGTGCTTCATGCCTaGCTGCCTCTGCTGCTGCTGCTGCTGCTGCTGCAGTGCACTCAC +
Preference number: 5 (lower is better)
Translates to: MRLGPNRMRGRVLHA*LPLLLLLLLLQCTH
Trigger: GTGAGTGCACTGCAGCAGCAGCAGCAGCAGCAGCAGAGGCAGCCAGGCATGAAGCACTCGCCCTCTCATCCTGTTGGGCCCAAGCCGCAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000402203.5
ENST00000446273.1
ENST00000454349.7
ENST00000467658.1
CDS CCA 90 bp CCACCAAAAAGATTCAGAGCAGGTCCCACGGGATCTGACTGGTTCTaGCCGGTCTCCAGCGACTGCCACCCCGCAGCTGGCGCACTTGGG +
Preference number: 5 (lower is better)
Translates to: PPKRFRAGPTGSDWF*PVSSDCHPAAGALG
Trigger: CCCAAGTGCGCCAGCTGCGGGGTGGCAGTCGCTGGAGACCGGCCAGAACCAGTCAGATCCCGTGGGACCTGCTCTGAATCTTTTTGGTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000402203.5
ENST00000454349.7
CDS CCA 90 bp GTGGACCCACCAAAAAGATTCAGAGCAGGTCCCACGGGATCTGACTaGTTCTGGCCGGTCTCCAGCGACTGCCACCCCGCAGCTGGCGCA +
Preference number: 5 (lower is better)
Translates to: VDPPKRFRAGPTGSD*FWPVSSDCHPAAGA
Trigger: TGCGCCAGCTGCGGGGTGGCAGTCGCTGGAGACCGGCCAGAACCAGTCAGATCCCGTGGGACCTGCTCTGAATCTTTTTGGTGGGTCCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000402203.5
ENST00000454349.7
CDS CCA 90 bp GCTGCTCCAGCTGGAATTGGAAGGTCGAACGTTGCCTGGAGGTGGTaGGGGTGGGCCTCCCCACGAACCAGAAGCCTCTGGTTGTGGTGG +
Preference number: 5 (lower is better)
Translates to: AAPAGIGRSNVAWRW*GWASPRTRSLWLWW
Trigger: CCACCACAACCAGAGGCTTCTGGTTCGTGGGGAGGCCCACCCCCACCACCTCCAGGCAACGTTCGACCTTCCAATTCCAGCTGGAGCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335727.13
ENST00000446273.1
ENST00000454349.7
CDS-3UTR CAA 90 bp GATCTGGTCCCGGTGGCCACACGCATGCGGGCAGTGTGGGTGCTGAGCTGCTGGTTGGGCTGGCGGCCGTaGGTTGGCTTAAACTTGGTT +
Preference number: 5 (lower is better)
Translates to: DLVPVATRMRAVWVLSCWLGWRP*VGLNLV
Trigger: AACCAAGTTTAAGCCAACCAACGGCCGCCAGCCCAA...CCAGCAGCTCAGCACCCACACTGCCCGCATGCGTGTGGCCACCGGGACCAGATC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp GATCTGGTCCCGGTGGCCACACGCATGCGGGCAGTGTGGGTGCTGAGCTGCTGGTGCTCCCACCAAGGGTaGGAATGGGCAGGTATTTGC +
Preference number: 5 (lower is better)
Translates to: DLVPVATRMRAVWVLSCWCSHQG*EWAGIC
Trigger: GCAAATACCTGCCCATTCCAACCCTTGGTGGGAGCA...CCAGCAGCTCAGCACCCACACTGCCCGCATGCGTGTGGCCACCGGGACCAGATC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp GATCTGGTCCCGGTGGCCACACGCATGCGGGCAGTGTGGGTGCTGAGCTGCTGGGCGGTTTTAGAGAAATaGCAGGCAGCAACCCCACCC +
Preference number: 5 (lower is better)
Translates to: DLVPVATRMRAVWVLSCWAVLEK*QAATPP
Trigger: GGGTGGGGTTGCTGCCTGCAATTTCTCTAAAACCGC...CCAGCAGCTCAGCACCCACACTGCCCGCATGCGTGTGGCCACCGGGACCAGATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp ATGCGGGCAGTGTGGGTGCTGAGCTGCTGGAGGAGTAGCTCTCCACTCCCTGACCAGCACCTCCAAGGGTaGAGTCTGGCGCAGTCCCAC +
Preference number: 5 (lower is better)
Translates to: MRAVWVLSCWRSSSPLPDQHLQG*SLAQSH
Trigger: GTGGGACTGCGCCAGACTCAACCCTTGGAGGTGCTG...GTCAGGGAGTGGAGAGCTACTCCTCCAGCAGCTCAGCACCCACACTGCCCGCAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp GATCTGGTCCCGGTGGCCACACGCATGCGGGCAGTGTGGGTGCTGAGCTGCTGGATTTCCCCTCAGGCCTaGGCACCTCTTCAATGTCCC +
Preference number: 5 (lower is better)
Translates to: DLVPVATRMRAVWVLSCWISPQA*APLQCP
Trigger: GGGACATTGAAGAGGTGCCAAGGCCTGAGGGGAAAT...CCAGCAGCTCAGCACCCACACTGCCCGCATGCGTGTGGCCACCGGGACCAGATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp GATCTGGTCCCGGTGGCCACACGCATGCGGGCAGTGTGGGTGCTGAGCTGCTGGCCTCCCACCCACCTTTaGAAGCTAGGCTTGCATTGC +
Preference number: 5 (lower is better)
Translates to: DLVPVATRMRAVWVLSCWPPTHL*KLGLHC
Trigger: GCAATGCAAGCCTAGCTTCAAAAGGTGGGTGGGAGG...CCAGCAGCTCAGCACCCACACTGCCCGCATGCGTGTGGCCACCGGGACCAGATC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS GCA 90 bp TGGCGCAGTCCCACTCTCACTCTGCAGCAGCGCTCCTGTCACTTGTaGGTTGTTTGGGTTTGCTCCAGGTGCTGTGCAGGGAGGAGGCCC +
Preference number: 5 (lower is better)
Translates to: WRSPTLTLQQRSCHL*VVWVCSRCCAGRRP
Trigger: GGGCCTCCTCCCTGCACAGCACCTGGAGCAAACCCAAACAACGCACAAGTGACAGGAGCGCTGCTGCAGAGTGAGAGTGGGACTGCGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000402203.5
ENST00000454349.7
CDS GCA 90 bp GGCGAGTGCTTCATGCCTGGCTGCCTCTGCTGCTGCTGCTGCTGCTaGTGCAGTGCACTCACCATTCGAGCCAGCTGCTGCTCTTGCTGT +
Preference number: 5 (lower is better)
Translates to: GECFMPGCLCCCCCC*CSALTIRASCCSCC
Trigger: ACAGCAAGAGCAGCAGCTGGCTCGAATGGTGAGTGCACTGCAGCAGCAGCAGCAGCAGCAGCAGAGGCAGCCAGGCATGAAGCACTCGCC
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000402203.5
ENST00000446273.1
ENST00000454349.7
ENST00000467658.1
CDS GCA 90 bp ACAATGAAGCGCCAGCAAGATCGGCCCCGCTGCTGCCACCAGCGCTaGTGCTCCACTGCCCGAGCCCAGTGGACCCACCAAAAAGATTCA +
Preference number: 5 (lower is better)
Translates to: TMKRQQDRPRCCHQR*CSTARAQWTHQKDS
Trigger: TGAATCTTTTTGGTGGGTCCACTGGGCTCGGGCAGTGGAGCAGCAGCGCTGGTGGCAGCAGCGGGGCCGATCTTGCTGGCGCTTCATTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000402203.5
ENST00000454349.7
CDS CCA 90 bp ATGCAGGACGGTGGAGGGGGCTGCCCACGTTTTAGTAACACTTTGTaGTCCTGCTGGCAACGGAATCGCGGCGGCACCTCCCGAGGCATG +
Preference number: 5 (lower is better)
Translates to: MQDGGGGCPRFSNTL*SCWQRNRGGTSRGM
Trigger: CATGCCTCGGGAGGTGCCGCCGCGATTCCGTTGCCAGCAGGACCACAAAGTGTTACTAAAACGTGGGCAGCCCCCTCCACCGTCCTGCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000402203.5
ENST00000454349.7
CDS-3UTR CAA 90 bp AACTGCAGGCCCCCTGGAATTTACCTGGCCATCAGACCTGCCAGCAACAGTGGCATGGCATTGGGAGCGTaGGCGGGCGTGTTCCCCCAG +
Preference number: 5 (lower is better)
Translates to: NCRPPGIYLAIRPASNSGMALGA*AGVFPQ
Trigger: CTGGGGGAACACGCCCGCCAACGCTCCCAATGCCAT...GCCACTGTTGCTGGCAGGTCTGATGGCCAGGTAAATTCCAGGGGGCCTGCAGTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000301923.13
ENST00000454349.7
CDS-3UTR CAA 90 bp CCCGGCACCTCCACACTCTCCACACTCGAGACTTGCAGATGCACGTGTGACGGTCATGTGCAGTGCAGTTaGGGCCTTGGCCGCCTCCTG +
Preference number: 5 (lower is better)
Translates to: PGTSTLSTLETCRCTCDGHVQCS*GLGRLL
Trigger: CAGGAGGCGGCCAAGGCCCAAACTGCACTGCACATG...ACCGTCACACGTGCATCTGCAAGTCTCGAGTGTGGAGAGTGTGGAGGTGCCGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR CAA 90 bp GATCTGGTCCCGGTGGCCACACGCATGCGGGCAGTGTGGGTGCTGAGCTGCTGGTACCCTGGCACTAGATaGCTGGAAGAGATGGCAGCT +
Preference number: 5 (lower is better)
Translates to: DLVPVATRMRAVWVLSCWYPGTR*LEEMAA
Trigger: AGCTGCCATCTCTTCCAGCAATCTAGTGCCAGGGTA...CCAGCAGCTCAGCACCCACACTGCCCGCATGCGTGTGGCCACCGGGACCAGATC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp AACTGCAGGCCCCCTGGAATTTACCTGGCCATCAGACCTGCCAGCAACAGTGGCACCAGAAGCCTCTGGTaGTGGTGGCGGCGGCTGCTG +
Preference number: 5 (lower is better)
Translates to: NCRPPGIYLAIRPASNSGTRSLW*WWRRLL
Trigger: CAGCAGCCGCCGCCACCACAACCAGAGGCTTCTGGT...GCCACTGTTGCTGGCAGGTCTGATGGCCAGGTAAATTCCAGGGGGCCTGCAGTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS GCA 90 bp GGCATTGGGAGCGTTGGCGGGCGTGTTCCCCCAGCCTGTGGTCGATaGTCCTGTATCATCCATCTCGCCCCACCCAGGACTGCTTTCATT +
Preference number: 5 (lower is better)
Translates to: GIGSVGGRVPPACGR*SCIIHLAPPRTAFI
Trigger: AATGAAAGCAGTCCTGGGTGGGGCGAGATGGATGATACAGGAGCATCGACCACAGGCTGGGGGAACACGCCCGCCAACGCTCCCAATGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000301923.13
ENST00000402203.5
ENST00000446273.1
ENST00000454349.7
CDS GCA 90 bp CTTCATGCCTGGCTGCCTCTGCTGCTGCTGCTGCTGCTGCTGCAGTaGACTCACCATTCGAGCCAGCTGCTGCTCTTGCTGTTGGCGTAC +
Preference number: 5 (lower is better)
Translates to: LHAWLPLLLLLLLLQ*THHSSQLLLLLLAY
Trigger: GTACGCCAACAGCAAGAGCAGCAGCTGGCTCGAATGGTGAGTGCACTGCAGCAGCAGCAGCAGCAGCAGCAGAGGCAGCCAGGCATGAAG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000402203.5
ENST00000446273.1
ENST00000454349.7
ENST00000467658.1
CDS GCA 90 bp GAGTGCTTCATGCCTGGCTGCCTCTGCTGCTGCTGCTGCTGCTGCTaGAGTGCACTCACCATTCGAGCCAGCTGCTGCTCTTGCTGTTGG +
Preference number: 5 (lower is better)
Translates to: ECFMPGCLCCCCCCC*SALTIRASCCSCCW
Trigger: CCAACAGCAAGAGCAGCAGCTGGCTCGAATGGTGAGTGCACTGCAGCAGCAGCAGCAGCAGCAGCAGAGGCAGCCAGGCATGAAGCACTC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000402203.5
ENST00000446273.1
ENST00000454349.7
ENST00000467658.1
CDS-3UTR CAA 90 bp GATCTGGTCCCGGTGGCCACACGCATGCGGGCAGTGTGGGTGCTGAGCTGCTGGCTGAAACTGGGGAATTaGTGGAAGCTGGCTCAGCAT +
Preference number: 5 (lower is better)
Translates to: DLVPVATRMRAVWVLSCWLKLGN*WKLAQH
Trigger: ATGCTGAGCCAGCTTCCACAAATTCCCCAGTTTCAG...CCAGCAGCTCAGCACCCACACTGCCCGCATGCGTGTGGCCACCGGGACCAGATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp GATCTGGTCCCGGTGGCCACACGCATGCGGGCAGTGTGGGTGCTGAGCTGCTGGGGAGGCCAACTGGCATaGCTGGATTTACTTCCGATT +
Preference number: 5 (lower is better)
Translates to: DLVPVATRMRAVWVLSCWGGQLA*LDLLPI
Trigger: AATCGGAAGTAAATCCAGCAATGCCAGTTGGCCTCC...CCAGCAGCTCAGCACCCACACTGCCCGCATGCGTGTGGCCACCGGGACCAGATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp GATCTGGTCCCGGTGGCCACACGCATGCGGGCAGTGTGGGTGCTGAGCTGCTGGAGATCGTTCTCAAGGTaGACCCATCAATCTGTGGGG +
Preference number: 5 (lower is better)
Translates to: DLVPVATRMRAVWVLSCWRSFSR*THQSVG
Trigger: CCCCACAGATTGATGGGTCAACCTTGAGAACGATCT...CCAGCAGCTCAGCACCCACACTGCCCGCATGCGTGTGGCCACCGGGACCAGATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp GTATGCCACAATCACTCGGGATCTGGTCCCGGTGGCCACACGCATGCGGGCAGTACATGTGCGTCCCCCTaGCTCAGGATGTCTGGGTGT +
Preference number: 5 (lower is better)
Translates to: VCHNHSGSGPGGHTHAGSTCASP*LRMSGC
Trigger: ACACCCAGACATCCTGAGCAAGGGGGACGCACATGT...ACTGCCCGCATGCGTGTGGCCACCGGGACCAGATCCCGAGTGATTGTGGCATAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp AACTGCAGGCCCCCTGGAATTTACCTGGCCATCAGACCTGCCAGCAACAGTGGCCAGCACCTCCAAGGGTaGAGTCTGGCGCAGTCCCAC +
Preference number: 5 (lower is better)
Translates to: NCRPPGIYLAIRPASNSGQHLQG*SLAQSH
Trigger: GTGGGACTGCGCCAGACTCAACCCTTGGAGGTGCTG...GCCACTGTTGCTGGCAGGTCTGATGGCCAGGTAAATTCCAGGGGGCCTGCAGTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp AACTGCAGGCCCCCTGGAATTTACCTGGCCATCAGACCTGCCAGCAACAGTGGCCAGCCCCCTGAGTTCTaGGTCTGTGTGGCAGCGCTC +
Preference number: 5 (lower is better)
Translates to: NCRPPGIYLAIRPASNSGQPPEF*VCVAAL
Trigger: GAGCGCTGCCACACAGACCAAGAACTCAGGGGGCTG...GCCACTGTTGCTGGCAGGTCTGATGGCCAGGTAAATTCCAGGGGGCCTGCAGTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp GATCTGGTCCCGGTGGCCACACGCATGCGGGCAGTGTGGGTGCTGAGCTGCTGGCTTCATTTGATTGCTTaGGCTGGGTGCATCTCCCCA +
Preference number: 5 (lower is better)
Translates to: DLVPVATRMRAVWVLSCWLHLIA*AGCISP
Trigger: TGGGGAGATGCACCCAGCCAAAGCAATCAAATGAAG...CCAGCAGCTCAGCACCCACACTGCCCGCATGCGTGTGGCCACCGGGACCAGATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp GTATGCCACAATCACTCGGGATCTGGTCCCGGTGGCCACACGCATGCGGGCAGTTCCAGAAGACCATCCTaGATTGGGCTGGCGTCCACC +
Preference number: 5 (lower is better)
Translates to: VCHNHSGSGPGGHTHAGSSRRPS*IGLAST
Trigger: GGTGGACGCCAGCCCAATCAAGGATGGTCTTCTGGA...ACTGCCCGCATGCGTGTGGCCACCGGGACCAGATCCCGAGTGATTGTGGCATAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp GTATGCCACAATCACTCGGGATCTGGTCCCGGTGGCCACACGCATGCGGGCAGTAGGTGCTGGGCCCCCTaGGGAATTCTTATCCCACAG +
Preference number: 5 (lower is better)
Translates to: VCHNHSGSGPGGHTHAGSRCWAP*GILIPQ
Trigger: CTGTGGGATAAGAATTCCCAAGGGGGCCCAGCACCT...ACTGCCCGCATGCGTGTGGCCACCGGGACCAGATCCCGAGTGATTGTGGCATAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS TCA 90 bp GTTGTCCGTTCGGCACTGCCACCCTTTTGGCATTGTTGCCACCATTaGCTGGTGGCGATGGAGAGCTGCCAATTGGGCTGGCGGCCGTTG +
Preference number: 5 (lower is better)
Translates to: VVRSALPPFWHCCHH*LVAMESCQLGWRPL
Trigger: CAACGGCCGCCAGCCCAATTGGCAGCTCTCCATCGCCACCAGTCAATGGTGGCAACAATGCCAAAAGGGTGGCAGTGCCGAACGGACAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000402203.5
ENST00000454349.7
CDS CCA 90 bp GTTCGGCACTGCCACCCTTTTGGCATTGTTGCCACCATTGACTGGTaGCGATGGAGAGCTGCCAATTGGGCTGGCGGCCGTTGGTTGGCT +
Preference number: 5 (lower is better)
Translates to: VRHCHPFGIVATIDW*RWRAANWAGGRWLA
Trigger: AGCCAACCAACGGCCGCCAGCCCAATTGGCAGCTCTCCATCGCCACCAGTCAATGGTGGCAACAATGCCAAAAGGGTGGCAGTGCCGAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000402203.5
ENST00000454349.7
CDS CCA 90 bp TCCGTTCGGCACTGCCACCCTTTTGGCATTGTTGCCACCATTGACTaGTGGCGATGGAGAGCTGCCAATTGGGCTGGCGGCCGTTGGTTG +
Preference number: 5 (lower is better)
Translates to: SVRHCHPFGIVATID*WRWRAANWAGGRWL
Trigger: CAACCAACGGCCGCCAGCCCAATTGGCAGCTCTCCATCGCCACCAGTCAATGGTGGCAACAATGCCAAAAGGGTGGCAGTGCCGAACGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000402203.5
ENST00000454349.7
CDS CCA 90 bp GCCCCACATTCAATGCGTTGGGTACCATGTTGTCCAGATGCGGCTTaGGCCCAACAGGATGAGAGGGCGAGTGCTTCATGCCTGGCTGCC +
Preference number: 5 (lower is better)
Translates to: APHSMRWVPCCPDAA*AQQDERASASCLAA
Trigger: GGCAGCCAGGCATGAAGCACTCGCCCTCTCATCCTGTTGGGCCCAAGCCGCATCTGGACAACATGGTACCCAACGCATTGAATGTGGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000402203.5
ENST00000446273.1
ENST00000454349.7
ENST00000467658.1
CDS-3UTR CAA 90 bp ATGCGGGCAGTGTGGGTGCTGAGCTGCTGGAGGAGTAGCTCTCCACTCCCTGACGGCACTGCCACCCTTTaGGCATTGTTGCCACCATTG +
Preference number: 5 (lower is better)
Translates to: MRAVWVLSCWRSSSPLPDGTATL*ALLPPL
Trigger: CAATGGTGGCAACAATGCCAAAAGGGTGGCAGTGCC...GTCAGGGAGTGGAGAGCTACTCCTCCAGCAGCTCAGCACCCACACTGCCCGCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp CAAAGGGTAAAAGCGTGCTGCCCGCTCTGCACACGGCAGAAGCTGGAAAATGCCAAACTGGGGAGGCACTaGCGCCCGGAGACTGGGAGA +
Preference number: 5 (lower is better)
Translates to: QRVKACCPLCTRQKLENAKLGRH*RPETGR
Trigger: TCTCCCAGTCTCCGGGCGCAAGTGCCTCCCCAGTTT...GGCATTTTCCAGCTTCTGCCGTGTGCAGAGCGGGCAGCACGCTTTTACCCTTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp ATGCGGGCAGTGTGGGTGCTGAGCTGCTGGAGGAGTAGCTCTCCACTCCCTGACCAGGGAGATGATGGTTaGGGGTTGGTCAGACCAGGA +
Preference number: 5 (lower is better)
Translates to: MRAVWVLSCWRSSSPLPDQGDDG*GLVRPG
Trigger: TCCTGGTCTGACCAACCCCAAACCATCATCTCCCTG...GTCAGGGAGTGGAGAGCTACTCCTCCAGCAGCTCAGCACCCACACTGCCCGCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp CAAAGGGTAAAAGCGTGCTGCCCGCTCTGCACACGGCAGAAGCTGGAAAATGCCCATGTGCAGTGCAGTTaGGGCCTTGGCCGCCTCCTG +
Preference number: 5 (lower is better)
Translates to: QRVKACCPLCTRQKLENAHVQCS*GLGRLL
Trigger: CAGGAGGCGGCCAAGGCCCAAACTGCACTGCACATG...GGCATTTTCCAGCTTCTGCCGTGTGCAGAGCGGGCAGCACGCTTTTACCCTTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp GTATGCCACAATCACTCGGGATCTGGTCCCGGTGGCCACACGCATGCGGGCAGTCTGGAAGCAGAGCTTTaGCATGGGGAACAGTGGTGG +
Preference number: 5 (lower is better)
Translates to: VCHNHSGSGPGGHTHAGSLEAEL*HGEQWW
Trigger: CCACCACTGTTCCCCATGCAAAAGCTCTGCTTCCAG...ACTGCCCGCATGCGTGTGGCCACCGGGACCAGATCCCGAGTGATTGTGGCATAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp GTATGCCACAATCACTCGGGATCTGGTCCCGGTGGCCACACGCATGCGGGCAGTCCACCCCTCTGGGAGTaGTACACACCTTTCAGTAGC +
Preference number: 5 (lower is better)
Translates to: VCHNHSGSGPGGHTHAGSPPLWE*YTPFSS
Trigger: GCTACTGAAAGGTGTGTACAACTCCCAGAGGGGTGG...ACTGCCCGCATGCGTGTGGCCACCGGGACCAGATCCCGAGTGATTGTGGCATAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp GATCTGGTCCCGGTGGCCACACGCATGCGGGCAGTGTGGGTGCTGAGCTGCTGGGATCAGCAAAGCCCTTaGGGAGCATTGTACAAGAGA +
Preference number: 5 (lower is better)
Translates to: DLVPVATRMRAVWVLSCWDQQSP*GALYKR
Trigger: TCTCTTGTACAATGCTCCCAAAGGGCTTTGCTGATC...CCAGCAGCTCAGCACCCACACTGCCCGCATGCGTGTGGCCACCGGGACCAGATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp GATCTGGTCCCGGTGGCCACACGCATGCGGGCAGTGTGGGTGCTGAGCTGCTGGTTCCCTTCACCCCATTaGTTGTCATTAGAGTCCTGG +
Preference number: 5 (lower is better)
Translates to: DLVPVATRMRAVWVLSCWFPSPH*LSLESW
Trigger: CCAGGACTCTAATGACAACAAATGGGGTGAAGGGAA...CCAGCAGCTCAGCACCCACACTGCCCGCATGCGTGTGGCCACCGGGACCAGATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp GATCTGGTCCCGGTGGCCACACGCATGCGGGCAGTGTGGGTGCTGAGCTGCTGGTCACTACTTCCTGCTTaGTGGTTGCTTCCAGTGCTT +
Preference number: 5 (lower is better)
Translates to: DLVPVATRMRAVWVLSCWSLLPA*WLLPVL
Trigger: AAGCACTGGAAGCAACCACAAAGCAGGAAGTAGTGA...CCAGCAGCTCAGCACCCACACTGCCCGCATGCGTGTGGCCACCGGGACCAGATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS GCA 90 bp GGGCCTTGGCCGCCTCCTGTTTGGTGCTGTATCGGATCAGGGCAGTaGCCTGGGTTAGATTCAGATGGAATGTCAGCAGTGGGCCATGCT +
Preference number: 5 (lower is better)
Translates to: GPWPPPVWCCIGSGQ*PGLDSDGMSAVGHA
Trigger: AGCATGGCCCACTGCTGACATTCCATCTGAATCTAACCCAGGGCACTGCCCTGATCCGATACAGCACCAAACAGGAGGCGGCCAAGGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000402203.5
ENST00000446273.1
ENST00000454349.7
CDS CCA 90 bp TGTCAGACCCGTCTACAATCACCTTGTCCCAGATGTGAATTGGGTTaGGGGAGGTGCCGTTGTTGGAGGAGGCTCCCGAGCCCCAAGTGG +
Preference number: 5 (lower is better)
Translates to: CQTRLQSPCPRCELG*GRCRCWRRLPSPKW
Trigger: CCACTTGGGGCTCGGGAGCCTCCTCCAACAACGGCACCTCCCCCAACCCAATTCACATCTGGGACAAGGTGATTGTAGACGGGTCTGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS CCA 90 bp CTCTTCCCAACCACTGGGTTCCTCATCCTTAGGTGTTGCAGGCTGTaGCCCGCTGCTCCAGCTGGAATTGGAAGGTCGAACGTTGCCTGG +
Preference number: 5 (lower is better)
Translates to: LFPTTGFLILRCCRL*PAAPAGIGRSNVAW
Trigger: CCAGGCAACGTTCGACCTTCCAATTCCAGCTGGAGCAGCGGGCCACAGCCTGCAACACCTAAGGATGAGGAACCCAGTGGTTGGGAAGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335727.13
ENST00000446273.1
ENST00000454349.7
CDS-3UTR CAA 90 bp GATCTGGTCCCGGTGGCCACACGCATGCGGGCAGTGTGGGTGCTGAGCTGCTGGTTCTTGCTCCTTCTCTaGTTTGCTTTCTTCACCAGG +
Preference number: 5 (lower is better)
Translates to: DLVPVATRMRAVWVLSCWFLLLL*FAFFTR
Trigger: CCTGGTGAAGAAAGCAAACAAGAGAAGGAGCAAGAA...CCAGCAGCTCAGCACCCACACTGCCCGCATGCGTGTGGCCACCGGGACCAGATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301923.13
CDS-3UTR CAA 90 bp GTATGCCACAATCACTCGGGATCTGGTCCCGGTGGCCACACGCATGCGGGCAGTGCCACCCTTTTGGCATaGTTGCCACCATTGACTGGT +
Preference number: 5 (lower is better)
Translates to: VCHNHSGSGPGGHTHAGSATLLA*LPPLTG
Trigger: ACCAGTCAATGGTGGCAACAATGCCAAAAGGGTGGC...ACTGCCCGCATGCGTGTGGCCACCGGGACCAGATCCCGAGTGATTGTGGCATAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp AACTGCAGGCCCCCTGGAATTTACCTGGCCATCAGACCTGCCAGCAACAGTGGCGTGCGTTGTTTGGGTTaGCTCCAGGTGCTGTGCAGG +
Preference number: 5 (lower is better)
Translates to: NCRPPGIYLAIRPASNSGVRCLG*LQVLCR
Trigger: CCTGCACAGCACCTGGAGCAAACCCAAACAACGCAC...GCCACTGTTGCTGGCAGGTCTGATGGCCAGGTAAATTCCAGGGGGCCTGCAGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp GTATGCCACAATCACTCGGGATCTGGTCCCGGTGGCCACACGCATGCGGGCAGTCCTGTCACTTGTGCGTaGTTTGGGTTTGCTCCAGGT +
Preference number: 5 (lower is better)
Translates to: VCHNHSGSGPGGHTHAGSPVTCA*FGFAPG
Trigger: ACCTGGAGCAAACCCAAACAACGCACAAGTGACAGG...ACTGCCCGCATGCGTGTGGCCACCGGGACCAGATCCCGAGTGATTGTGGCATAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp CCGGCACCTCCACACTCTCCACACTCGAGACTTGCAGATGCACGTGTGACGGTGCAGGACTGCTTTCATTaGGCTCACCCCAAGCGGAAG +
Preference number: 5 (lower is better)
Translates to: PAPPHSPHSRLADARVTVQDCFH*AHPKRK
Trigger: CTTCCGCTTGGGGTGAGCCAAATGAAAGCAGTCCTG...CACCGTCACACGTGCATCTGCAAGTCTCGAGTGTGGAGAGTGTGGAGGTGCCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR CAA 90 bp CACACACATGTGCGTCCCCCTTGCTCAGGATGTCTGGGTGTATGTACGAAGGCAAAACTGGGGAGGCACTaGCGCCCGGAGACTGGGAGA +
Preference number: 5 (lower is better)
Translates to: HTHVRPPCSGCLGVCTKAKLGRH*RPETGR
Trigger: TCTCCCAGTCTCCGGGCGCAAGTGCCTCCCCAGTTT...TGCCTTCGTACATACACCCAGACATCCTGAGCAAGGGGGACGCACATGTGTGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp AACTGCAGGCCCCCTGGAATTTACCTGGCCATCAGACCTGCCAGCAACAGTGGCTTGGCCGCCTCCTGTTaGGTGCTGTATCGGATCAGG +
Preference number: 5 (lower is better)
Translates to: NCRPPGIYLAIRPASNSGLAASC*VLYRIR
Trigger: CCTGATCCGATACAGCACCAAACAGGAGGCGGCCAA...GCCACTGTTGCTGGCAGGTCTGATGGCCAGGTAAATTCCAGGGGGCCTGCAGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp GATCTGGTCCCGGTGGCCACACGCATGCGGGCAGTGTGGGTGCTGAGCTGCTGGACTTTCGTTACTTTTTaGGGTGGCGGTAGGAGGTTA +
Preference number: 5 (lower is better)
Translates to: DLVPVATRMRAVWVLSCWTFVTF*GGGRRL
Trigger: TAACCTCCTACCGCCACCCAAAAAAGTAACGAAAGT...CCAGCAGCTCAGCACCCACACTGCCCGCATGCGTGTGGCCACCGGGACCAGATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp GATCTGGTCCCGGTGGCCACACGCATGCGGGCAGTGTGGGTGCTGAGCTGCTGGGAAGAGAAAACTTTTTaGCCTGACAAGCAACAGCCC +
Preference number: 5 (lower is better)
Translates to: DLVPVATRMRAVWVLSCWEEKTF*PDKQQP
Trigger: GGGCTGTTGCTTGTCAGGCAAAAAAGTTTTCTCTTC...CCAGCAGCTCAGCACCCACACTGCCCGCATGCGTGTGGCCACCGGGACCAGATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp GTATGCCACAATCACTCGGGATCTGGTCCCGGTGGCCACACGCATGCGGGCAGTTACCCTGGCACTAGATaGCTGGAAGAGATGGCAGCT +
Preference number: 5 (lower is better)
Translates to: VCHNHSGSGPGGHTHAGSYPGTR*LEEMAA
Trigger: AGCTGCCATCTCTTCCAGCAATCTAGTGCCAGGGTA...ACTGCCCGCATGCGTGTGGCCACCGGGACCAGATCCCGAGTGATTGTGGCATAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp GATCTGGTCCCGGTGGCCACACGCATGCGGGCAGTGTGGGTGCTGAGCTGCTGGAGTGCTAGAATTTGGTaGGTTTGGACCACTCCATTC +
Preference number: 5 (lower is better)
Translates to: DLVPVATRMRAVWVLSCWSARIW*VWTTPF
Trigger: GAATGGAGTGGTCCAAACCAACCAAATTCTAGCACT...CCAGCAGCTCAGCACCCACACTGCCCGCATGCGTGTGGCCACCGGGACCAGATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp GCACCTCCACACTCTCCACACTCGAGACTTGCAGATGCACGTGTGACGGTGCCAAGGTGCTGGGCCCCCTaGGGAATTCTTATCCCACAG +
Preference number: 5 (lower is better)
Translates to: APPHSPHSRLADARVTVPRCWAP*GILIPQ
Trigger: CTGTGGGATAAGAATTCCCAAGGGGGCCCAGCACCT...TGGCACCGTCACACGTGCATCTGCAAGTCTCGAGTGTGGAGAGTGTGGAGGTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR CAA 90 bp CACACACATGTGCGTCCCCCTTGCTCAGGATGTCTGGGTGTATGTACGAAGGCATTGGGGTGGGCAGGTTaGGTTCTCGAGGTGCTGGGC +
Preference number: 5 (lower is better)
Translates to: HTHVRPPCSGCLGVCTKALGWAG*VLEVLG
Trigger: GCCCAGCACCTCGAGAACCAAACCTGCCCACCCCAA...TGCCTTCGTACATACACCCAGACATCCTGAGCAAGGGGGACGCACATGTGTGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp AACTGCAGGCCCCCTGGAATTTACCTGGCCATCAGACCTGCCAGCAACAGTGGCGCGAAGTTTTGGGGGTaGAGCCCTGTGCCGATTGCT +
Preference number: 5 (lower is better)
Translates to: NCRPPGIYLAIRPASNSGAKFWG*SPVPIA
Trigger: AGCAATCGGCACAGGGCTCAACCCCCAAAACTTCGC...GCCACTGTTGCTGGCAGGTCTGATGGCCAGGTAAATTCCAGGGGGCCTGCAGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000454349.7
CDS GCA 90 bp GGTGGTGTGCTTTTGCTCCAGACTGGCGCAGTCCCACTCTCACTCTaGAGCAGCGCTCCTGTCACTTGTGCGTTGTTTGGGTTTGCTCCA +
Preference number: 5 (lower is better)
Translates to: GGVLLLQTGAVPLSL*SSAPVTCALFGFAP
Trigger: TGGAGCAAACCCAAACAACGCACAAGTGACAGGAGCGCTGCTGCAGAGTGAGAGTGGGACTGCGCCAGTCTGGAGCAAAAGCACACCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301923.13
ENST00000402203.5
CDS GCA 90 bp TCTTTCCTCCTTGTCCCCAGCTTGCTGAGTTGTGGGAGGAAGCACTaGCCTGAGAGCCAGTGGTGTTCCAGACTCCTCCATCCTCCTCCT +
Preference number: 5 (lower is better)
Translates to: SFLLVPSLLSCGRKH*PESQWCSRLLHPPP
Trigger: AGGAGGAGGATGGAGGAGTCTGGAACACCACTGGCTCTCAGGGCAGTGCTTCCTCCCACAACTCAGCAAGCTGGGGACAAGGAGGAAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000402203.5
ENST00000446273.1
ENST00000454349.7
CDS-3UTR CAA 90 bp CTCTCCACACTCGAGACTTGCAGATGCACGTGTGACGGTGCCATTCTTCGTATAATGGCATTGGGAGCGTaGGCGGGCGTGTTCCCCCAG +
Preference number: 5 (lower is better)
Translates to: LSTLETCRCTCDGAILRIMALGA*AGVFPQ
Trigger: CTGGGGGAACACGCCCGCCAACGCTCCCAATGCCAT...TATACGAAGAATGGCACCGTCACACGTGCATCTGCAAGTCTCGAGTGTGGAGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR CAA 90 bp CAAAGGGTAAAAGCGTGCTGCCCGCTCTGCACACGGCAGAAGCTGGAAAATGCCCTCCTTGTCCCCAGCTaGCTGAGTTGTGGGAGGAAG +
Preference number: 5 (lower is better)
Translates to: QRVKACCPLCTRQKLENALLVPS*LSCGRK
Trigger: CTTCCTCCCACAACTCAGCAAGCTGGGGACAAGGAG...GGCATTTTCCAGCTTCTGCCGTGTGCAGAGCGGGCAGCACGCTTTTACCCTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp ATGCGGGCAGTGTGGGTGCTGAGCTGCTGGAGGAGTAGCTCTCCACTCCCTGACCTGTTGGGAAACTGCTaGAGCATTGAGGCAGAAACC +
Preference number: 5 (lower is better)
Translates to: MRAVWVLSCWRSSSPLPDLLGNC*SIEAET
Trigger: GGTTTCTGCCTCAATGCTCAAGCAGTTTCCCAACAG...GTCAGGGAGTGGAGAGCTACTCCTCCAGCAGCTCAGCACCCACACTGCCCGCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp AACTGCAGGCCCCCTGGAATTTACCTGGCCATCAGACCTGCCAGCAACAGTGGCCCATGGCACTCCTGGTaGGAATTCTGGAGGCCAACT +
Preference number: 5 (lower is better)
Translates to: NCRPPGIYLAIRPASNSGPWHSW*EFWRPT
Trigger: AGTTGGCCTCCAGAATTCCAACCAGGAGTGCCATGG...GCCACTGTTGCTGGCAGGTCTGATGGCCAGGTAAATTCCAGGGGGCCTGCAGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp CTTTGGTGGAAAAGACCCGGCACCTCCACACTCTCCACACTCGAGACTTGCAGAAGTGCAGTTTGGGCCTaGGCCGCCTCCTGTTTGGTG +
Preference number: 5 (lower is better)
Translates to: LWWKRPGTSTLSTLETCRSAVWA*AASCLV
Trigger: CACCAAACAGGAGGCGGCCAAGGCCCAAACTGCACT...TCTGCAAGTCTCGAGTGTGGAGAGTGTGGAGGTGCCGGGTCTTTTCCACCAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR CAA 90 bp ATGCGGGCAGTGTGGGTGCTGAGCTGCTGGAGGAGTAGCTCTCCACTCCCTGACGGAATGGGCAGGTATTaGCTGGTACAAAATGTCGGC +
Preference number: 5 (lower is better)
Translates to: MRAVWVLSCWRSSSPLPDGMGRY*LVQNVG
Trigger: GCCGACATTTTGTACCAGCAAATACCTGCCCATTCC...GTCAGGGAGTGGAGAGCTACTCCTCCAGCAGCTCAGCACCCACACTGCCCGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp AACTGCAGGCCCCCTGGAATTTACCTGGCCATCAGACCTGCCAGCAACAGTGGCCTGGAAGCAGAGCTTTaGCATGGGGAACAGTGGTGG +
Preference number: 5 (lower is better)
Translates to: NCRPPGIYLAIRPASNSGLEAEL*HGEQWW
Trigger: CCACCACTGTTCCCCATGCAAAAGCTCTGCTTCCAG...GCCACTGTTGCTGGCAGGTCTGATGGCCAGGTAAATTCCAGGGGGCCTGCAGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp CAAAGGGTAAAAGCGTGCTGCCCGCTCTGCACACGGCAGAAGCTGGAAAATGCCACATGTGCGTCCCCCTaGCTCAGGATGTCTGGGTGT +
Preference number: 5 (lower is better)
Translates to: QRVKACCPLCTRQKLENATCASP*LRMSGC
Trigger: ACACCCAGACATCCTGAGCAAGGGGGACGCACATGT...GGCATTTTCCAGCTTCTGCCGTGTGCAGAGCGGGCAGCACGCTTTTACCCTTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp ATGCGGGCAGTGTGGGTGCTGAGCTGCTGGAGGAGTAGCTCTCCACTCCCTGACAAAATACACACACCTTaGGCGCTGGCCACAAACCCA +
Preference number: 5 (lower is better)
Translates to: MRAVWVLSCWRSSSPLPDKIHTP*ALATNP
Trigger: TGGGTTTGTGGCCAGCGCCAAAGGTGTGTGTATTTT...GTCAGGGAGTGGAGAGCTACTCCTCCAGCAGCTCAGCACCCACACTGCCCGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp GATCTGGTCCCGGTGGCCACACGCATGCGGGCAGTGTGGGTGCTGAGCTGCTGGCTTCCAGGAGGAACTTaGACTTCCCTAATGACTAAA +
Preference number: 5 (lower is better)
Translates to: DLVPVATRMRAVWVLSCWLPGGT*TSLMTK
Trigger: TTTAGTCATTAGGGAAGTCAAAGTTCCTCCTGGAAG...CCAGCAGCTCAGCACCCACACTGCCCGCATGCGTGTGGCCACCGGGACCAGATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp GATCTGGTCCCGGTGGCCACACGCATGCGGGCAGTGTGGGTGCTGAGCTGCTGGTGTGTAATACCCTGTTaGCATCAACAGCAACGTGAT +
Preference number: 5 (lower is better)
Translates to: DLVPVATRMRAVWVLSCWCVIPC*HQQQRD
Trigger: ATCACGTTGCTGTTGATGCAAACAGGGTATTACACA...CCAGCAGCTCAGCACCCACACTGCCCGCATGCGTGTGGCCACCGGGACCAGATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp GATCTGGTCCCGGTGGCCACACGCATGCGGGCAGTGTGGGTGCTGAGCTGCTGGCCTCGAGGTATTATTTaGTGTGAGACAGTTGAAACG +
Preference number: 5 (lower is better)
Translates to: DLVPVATRMRAVWVLSCWPRGII*CETVET
Trigger: CGTTTCAACTGTCTCACACAAAATAATACCTCGAGG...CCAGCAGCTCAGCACCCACACTGCCCGCATGCGTGTGGCCACCGGGACCAGATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp GTATGCCACAATCACTCGGGATCTGGTCCCGGTGGCCACACGCATGCGGGCAGTAGCCCTTTGGGAGCATaGTACAAGAGATACAAGGGC +
Preference number: 5 (lower is better)
Translates to: VCHNHSGSGPGGHTHAGSSPLGA*YKRYKG
Trigger: GCCCTTGTATCTCTTGTACAATGCTCCCAAAGGGCT...ACTGCCCGCATGCGTGTGGCCACCGGGACCAGATCCCGAGTGATTGTGGCATAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp GATCTGGTCCCGGTGGCCACACGCATGCGGGCAGTGTGGGTGCTGAGCTGCTGGATCAGTGTTATGAATTaGAGCCTGTTCTCTGCCAGA +
Preference number: 5 (lower is better)
Translates to: DLVPVATRMRAVWVLSCWISVMN*SLFSAR
Trigger: TCTGGCAGAGAACAGGCTCAAATTCATAACACTGAT...CCAGCAGCTCAGCACCCACACTGCCCGCATGCGTGTGGCCACCGGGACCAGATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp CTTTGGTGGAAAAGACCCGGCACCTCCACACTCTCCACACTCGAGACTTGCAGAAGCCTGGGCATTGCCTaGGTTTTCAGGGAGGGGGTG +
Preference number: 5 (lower is better)
Translates to: LWWKRPGTSTLSTLETCRSLGIA*VFREGV
Trigger: CACCCCCTCCCTGAAAACCAAGGCAATGCCCAGGCT...TCTGCAAGTCTCGAGTGTGGAGAGTGTGGAGGTGCCGGGTCTTTTCCACCAAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR CAA 90 bp CACACACATGTGCGTCCCCCTTGCTCAGGATGTCTGGGTGTATGTACGAAGGCAAGCCTGGGCATTGCCTaGGTTTTCAGGGAGGGGGTG +
Preference number: 5 (lower is better)
Translates to: HTHVRPPCSGCLGVCTKASLGIA*VFREGV
Trigger: CACCCCCTCCCTGAAAACCAAGGCAATGCCCAGGCT...TGCCTTCGTACATACACCCAGACATCCTGAGCAAGGGGGACGCACATGTGTGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp ATGCGGGCAGTGTGGGTGCTGAGCTGCTGGAGGAGTAGCTCTCCACTCCCTGACCCATCCAGACTTCATTaGATTGCTTTGGCTGGGTGC +
Preference number: 5 (lower is better)
Translates to: MRAVWVLSCWRSSSPLPDPSRLH*IALAGC
Trigger: GCACCCAGCCAAAGCAATCAAATGAAGTCTGGATGG...GTCAGGGAGTGGAGAGCTACTCCTCCAGCAGCTCAGCACCCACACTGCCCGCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp GCAGCTGCCAGAATACTCACGGGTGCATCTTCATGCATGTTTGTCTACGTGGGTACCAGAAGCCTCTGGTaGTGGTGGCGGCGGCTGCTG +
Preference number: 5 (lower is better)
Translates to: AAARILTGASSCMFVYVGTRSLW*WWRRLL
Trigger: CAGCAGCCGCCGCCACCACAACCAGAGGCTTCTGGT...ACCCACGTAGACAAACATGCATGAAGATGCACCCGTGAGTATTCTGGCAGCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR CAA 90 bp GCACCTCCACACTCTCCACACTCGAGACTTGCAGATGCACGTGTGACGGTGCCAGCAGGTGGTGTGCTTTaGCTCCAGACTGATGCCGAT +
Preference number: 5 (lower is better)
Translates to: APPHSPHSRLADARVTVPAGGVL*LQTDAD
Trigger: ATCGGCATCAGTCTGGAGCAAAAGCACACCACCTGC...TGGCACCGTCACACGTGCATCTGCAAGTCTCGAGTGTGGAGAGTGTGGAGGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR CAA 90 bp CCGGCACCTCCACACTCTCCACACTCGAGACTTGCAGATGCACGTGTGACGGTGAGGACAATCCAAGCTTaGGTGGAAAAGACCCGGCAC +
Preference number: 5 (lower is better)
Translates to: PAPPHSPHSRLADARVTVRTIQA*VEKTRH
Trigger: GTGCCGGGTCTTTTCCACCAAAGCTTGGATTGTCCT...CACCGTCACACGTGCATCTGCAAGTCTCGAGTGTGGAGAGTGTGGAGGTGCCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR CAA 90 bp ATGCGGGCAGTGTGGGTGCTGAGCTGCTGGAGGAGTAGCTCTCCACTCCCTGACCCCAAGGCACCCATCTaGATTGGAGAAAGGCAAAGT +
Preference number: 5 (lower is better)
Translates to: MRAVWVLSCWRSSSPLPDPKAPI*IGERQS
Trigger: ACTTTGCCTTTCTCCAATCAAGATGGGTGCCTTGGG...GTCAGGGAGTGGAGAGCTACTCCTCCAGCAGCTCAGCACCCACACTGCCCGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454349.7
CDS CCA 90 bp TTGGCCGCCTCCTGTTTGGTGCTGTATCGGATCAGGGCAGTGCCCTaGGTTAGATTCAGATGGAATGTCAGCAGTGGGCCATGCTGCATG +
Preference number: 5 (lower is better)
Translates to: LAASCLVLYRIRAVP*VRFRWNVSSGPCCM
Trigger: CATGCAGCATGGCCCACTGCTGACATTCCATCTGAATCTAACCCAGGGCACTGCCCTGATCCGATACAGCACCAAACAGGAGGCGGCCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000402203.5
ENST00000446273.1
ENST00000454349.7
CDS CCA 90 bp GTCTACGTGGGTGTAGGACCGAATACTCACATGTGCAGTGCAGTTTaGGCCTTGGCCGCCTCCTGTTTGGTGCTGTATCGGATCAGGGCA +
Preference number: 5 (lower is better)
Translates to: VYVGVGPNTHMCSAV*ALAASCLVLYRIRA
Trigger: TGCCCTGATCCGATACAGCACCAAACAGGAGGCGGCCAAGGCCCAAACTGCACTGCACATGTGAGTATTCGGTCCTACACCCACGTAGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR CAA 90 bp AATGAAGCTGAAGGAATCGAGTGGGAGGGACTGTTCTCCTCTTTGGGGGAGCTCATGGAGAGCTGCCAATaGGGCTGGCGGCCGTTGGTT +
Preference number: 5 (lower is better)
Translates to: NEAEGIEWEGLFSSLGELMESCQ*GWRPLV
Trigger: AACCAACGGCCGCCAGCCCAATTGGCAGCTCTCCAT...GAGCTCCCCCAAAGAGGAGAACAGTCCCTCCCACTCGATTCCTTCAGCTTCATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp CAAAGGGTAAAAGCGTGCTGCCCGCTCTGCACACGGCAGAAGCTGGAAAATGCCGCATTGTTGCCACCATaGACTGGTGGCGATGGAGAG +
Preference number: 5 (lower is better)
Translates to: QRVKACCPLCTRQKLENAALLPP*TGGDGE
Trigger: CTCTCCATCGCCACCAGTCAATGGTGGCAACAATGC...GGCATTTTCCAGCTTCTGCCGTGTGCAGAGCGGGCAGCACGCTTTTACCCTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp TCTGAACCAAGAAAGGTTGAGAGCTCCAGGTATTGTGTGGAGAACATTCTGGAGGGCGGCGCTTGGCGGTaGTCCGTTCGGCACTGCCAC +
Preference number: 5 (lower is better)
Translates to: SEPRKVESSRYCVENILEGGAWR*SVRHCH
Trigger: GTGGCAGTGCCGAACGGACAACCGCCAAGCGCCGCC...CTCCAGAATGTTCTCCACACAATACCTGGAGCTCTCAACCTTTCTTGGTTCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp CAAAGGGTAAAAGCGTGCTGCCCGCTCTGCACACGGCAGAAGCTGGAAAATGCCCAGGACTGCTTTCATTaGGCTCACCCCAAGCGGAAG +
Preference number: 5 (lower is better)
Translates to: QRVKACCPLCTRQKLENAQDCFH*AHPKRK
Trigger: CTTCCGCTTGGGGTGAGCCAAATGAAAGCAGTCCTG...GGCATTTTCCAGCTTCTGCCGTGTGCAGAGCGGGCAGCACGCTTTTACCCTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000301923.13
ENST00000454349.7
CDS-3UTR CAA 90 bp GATCTGGTCCCGGTGGCCACACGCATGCGGGCAGTGTGGGTGCTGAGCTGCTGGAATCCATTTTGCTGCTaGGATTATCTTCAGTCTGAC +
Preference number: 5 (lower is better)
Translates to: DLVPVATRMRAVWVLSCWNPFCC*DYLQSD
Trigger: GTCAGACTGAAGATAATCCAAGCAGCAAAATGGATT...CCAGCAGCTCAGCACCCACACTGCCCGCATGCGTGTGGCCACCGGGACCAGATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp AACTGCAGGCCCCCTGGAATTTACCTGGCCATCAGACCTGCCAGCAACAGTGGCGGACTCAGGCCACTGTaGGGAAACTGCTTGAGCATT +
Preference number: 5 (lower is better)
Translates to: NCRPPGIYLAIRPASNSGGLRPL*GNCLSI
Trigger: AATGCTCAAGCAGTTTCCCAACAGTGGCCTGAGTCC...GCCACTGTTGCTGGCAGGTCTGATGGCCAGGTAAATTCCAGGGGGCCTGCAGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp CTTTGGTGGAAAAGACCCGGCACCTCCACACTCTCCACACTCGAGACTTGCAGAAGCCAGCTGCTGCTCTaGCTGTTGGCGTACAGCTTG +
Preference number: 5 (lower is better)
Translates to: LWWKRPGTSTLSTLETCRSQLLL*LLAYSL
Trigger: CAAGCTGTACGCCAACAGCAAGAGCAGCAGCTGGCT...TCTGCAAGTCTCGAGTGTGGAGAGTGTGGAGGTGCCGGGTCTTTTCCACCAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR CAA 90 bp CCCCTGTCTCCTCTCCCAAGTCCCAGAATCTCTTCCACTCAACTCTACACTGTGGCGTTGGGTACCATGTaGTCCAGATGCGGCTTGGGC +
Preference number: 5 (lower is better)
Translates to: PLSPLPSPRISSTQLYTVALGTM*SRCGLG
Trigger: GCCCAAGCCGCATCTGGACAACATGGTACCCAACGC...CACAGTGTAGAGTTGAGTGGAAGAGATTCTGGGACTTGGGAGAGGAGACAGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp GATCTGGTCCCGGTGGCCACACGCATGCGGGCAGTGTGGGTGCTGAGCTGCTGGTACTTCCGATTTTATTaGTTGGTGGAGATTTGGCAG +
Preference number: 5 (lower is better)
Translates to: DLVPVATRMRAVWVLSCWYFRFY*LVEIWQ
Trigger: CTGCCAAATCTCCACCAACAAATAAAATCGGAAGTA...CCAGCAGCTCAGCACCCACACTGCCCGCATGCGTGTGGCCACCGGGACCAGATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp CTTTGGTGGAAAAGACCCGGCACCTCCACACTCTCCACACTCGAGACTTGCAGAGATGATGGTTTGGGGTaGGTCAGACCAGGAGGTGGG +
Preference number: 5 (lower is better)
Translates to: LWWKRPGTSTLSTLETCRDDGLG*VRPGGG
Trigger: CCCACCTCCTGGTCTGACCAACCCCAAACCATCATC...TCTGCAAGTCTCGAGTGTGGAGAGTGTGGAGGTGCCGGGTCTTTTCCACCAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR CAA 90 bp CAAAGGGTAAAAGCGTGCTGCCCGCTCTGCACACGGCAGAAGCTGGAAAATGCCCAGGGAGATGATGGTTaGGGGTTGGTCAGACCAGGA +
Preference number: 5 (lower is better)
Translates to: QRVKACCPLCTRQKLENAQGDDG*GLVRPG
Trigger: TCCTGGTCTGACCAACCCCAAACCATCATCTCCCTG...GGCATTTTCCAGCTTCTGCCGTGTGCAGAGCGGGCAGCACGCTTTTACCCTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp CCCCTGTCTCCTCTCCCAAGTCCCAGAATCTCTTCCACTCAACTCTACACTGTGTGTAGGGGGCTGAGCTaGTGCCAGAAAGCGGCTGAC +
Preference number: 5 (lower is better)
Translates to: PLSPLPSPRISSTQLYTVCRGLS*CQKAAD
Trigger: GTCAGCCGCTTTCTGGCACAAGCTCAGCCCCCTACA...CACAGTGTAGAGTTGAGTGGAAGAGATTCTGGGACTTGGGAGAGGAGACAGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp ACTTTCAGGTCAGCACGAGTGAAGCGTGGTTTCCTGAGCTTGAAGGGCTCTGAATGGCTCGCAGGAGCCTaGGGATATGCTCCTGGCCCA +
Preference number: 5 (lower is better)
Translates to: TFRSARVKRGFLSLKGSEWLAGA*GYAPGP
Trigger: TGGGCCAGGAGCATATCCCAAGGCTCCTGCGAGCCA...TTCAGAGCCCTTCAAGCTCAGGAAACCACGCTTCACTCGTGCTGACCTGAAAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp CACACACATGTGCGTCCCCCTTGCTCAGGATGTCTGGGTGTATGTACGAAGGCACCTGAACCACATTGGTaGACAGGAACTGCAGGCCCC +
Preference number: 5 (lower is better)
Translates to: HTHVRPPCSGCLGVCTKAPEPHW*TGTAGP
Trigger: GGGGCCTGCAGTTCCTGTCAACCAATGTGGTTCAGG...TGCCTTCGTACATACACCCAGACATCCTGAGCAAGGGGGACGCACATGTGTGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp GATCTGGTCCCGGTGGCCACACGCATGCGGGCAGTGTGGGTGCTGAGCTGCTGGTTTGTTGTCTGTTTTTaGGTTACGCAGAACAGGGAT +
Preference number: 5 (lower is better)
Translates to: DLVPVATRMRAVWVLSCWFVVCF*VTQNRD
Trigger: ATCCCTGTTCTGCGTAACCAAAAAACAGACAACAAA...CCAGCAGCTCAGCACCCACACTGCCCGCATGCGTGTGGCCACCGGGACCAGATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp GCACCTCCACACTCTCCACACTCGAGACTTGCAGATGCACGTGTGACGGTGCCACCTTCACCCCATTTGTaGTCATTAGAGTCCTGGGGG +
Preference number: 5 (lower is better)
Translates to: APPHSPHSRLADARVTVPPSPHL*SLESWG
Trigger: CCCCCAGGACTCTAATGACAACAAATGGGGTGAAGG...TGGCACCGTCACACGTGCATCTGCAAGTCTCGAGTGTGGAGAGTGTGGAGGTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR CAA 90 bp GTATGCCACAATCACTCGGGATCTGGTCCCGGTGGCCACACGCATGCGGGCAGTACCCCAGATGTCATTTaGTTCCCTTCACCCCATTTG +
Preference number: 5 (lower is better)
Translates to: VCHNHSGSGPGGHTHAGSTPDVI*FPSPHL
Trigger: CAAATGGGGTGAAGGGAACAAAATGACATCTGGGGT...ACTGCCCGCATGCGTGTGGCCACCGGGACCAGATCCCGAGTGATTGTGGCATAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp GCAGCTGCCAGAATACTCACGGGTGCATCTTCATGCATGTTTGTCTACGTGGGTCAGCCCCCTGAGTTCTaGGTCTGTGTGGCAGCGCTC +
Preference number: 5 (lower is better)
Translates to: AAARILTGASSCMFVYVGQPPEF*VCVAAL
Trigger: GAGCGCTGCCACACAGACCAAGAACTCAGGGGGCTG...ACCCACGTAGACAAACATGCATGAAGATGCACCCGTGAGTATTCTGGCAGCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR CAA 90 bp ACTTTCAGGTCAGCACGAGTGAAGCGTGGTTTCCTGAGCTTGAAGGGCTCTGAACAGCCCCCTGAGTTCTaGGTCTGTGTGGCAGCGCTC +
Preference number: 5 (lower is better)
Translates to: TFRSARVKRGFLSLKGSEQPPEF*VCVAAL
Trigger: GAGCGCTGCCACACAGACCAAGAACTCAGGGGGCTG...TTCAGAGCCCTTCAAGCTCAGGAAACCACGCTTCACTCGTGCTGACCTGAAAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp GCACCTCCACACTCTCCACACTCGAGACTTGCAGATGCACGTGTGACGGTGCCAGAAGCTAGGCTTGCATaGCCACCATTACCCCAAGTC +
Preference number: 5 (lower is better)
Translates to: APPHSPHSRLADARVTVPEARLA*PPLPQV
Trigger: GACTTGGGGTAATGGTGGCAATGCAAGCCTAGCTTC...TGGCACCGTCACACGTGCATCTGCAAGTCTCGAGTGTGGAGAGTGTGGAGGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR CAA 90 bp CAAAGGGTAAAAGCGTGCTGCCCGCTCTGCACACGGCAGAAGCTGGAAAATGCCCTGCTCCAGCTGGAATaGGAAGGTCGAACGTTGCCT +
Preference number: 5 (lower is better)
Translates to: QRVKACCPLCTRQKLENALLQLE*EGRTLP
Trigger: AGGCAACGTTCGACCTTCCAATTCCAGCTGGAGCAG...GGCATTTTCCAGCTTCTGCCGTGTGCAGAGCGGGCAGCACGCTTTTACCCTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS TCA 90 bp TATCACCAGCAGGACCCGTATGGCCACCCAGTGTGTCACCAGGGATaGTATCAAACTGGTTGTACGGTGACCCTCCCCGGGTTTTACCAG +
Preference number: 5 (lower is better)
Translates to: YHQQDPYGHPVCHQG*YQTGCTVTLPGFYQ
Trigger: CTGGTAAAACCCGGGGAGGGTCACCGTACAACCAGTTTGATATCATCCCTGGTGACACACTGGGTGGCCATACGGGTCCTGCTGGTGATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000402203.5
ENST00000446273.1
ENST00000454349.7
CDS GCA 90 bp AGGTATTGGCCCTTTGGTTTGAAGGTCTGGGAGCCCCACATTCAATaGGTTGGGTACCATGTTGTCCAGATGCGGCTTGGGCCCAACAGG +
Preference number: 5 (lower is better)
Translates to: RYWPFGLKVWEPHIQ*VGYHVVQMRLGPNR
Trigger: CCTGTTGGGCCCAAGCCGCATCTGGACAACATGGTACCCAACGCATTGAATGTGGGGCTCCCAGACCTTCAAACCAAAGGGCCAATACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000402203.5
ENST00000446273.1
ENST00000454349.7
ENST00000467658.1
CDS GCA 90 bp CACTCCCAGTCTTTCGATCTCCAGTGCTTTGTGAAGGGGCATCAGTaGTCCTGGAGGTGTTCCCCAAGCCCATTCCAAAGGGCATTCCCT +
Preference number: 5 (lower is better)
Translates to: HSQSFDLQCFVKGHQ*SWRCSPSPFQRAFP
Trigger: AGGGAATGCCCTTTGGAATGGGCTTGGGGAACACCTCCAGGAGCACTGATGCCCCTTCACAAAGCACTGGAGATCGAAAGACTGGGAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335727.13
ENST00000446273.1
ENST00000454349.7
CDS CCA 90 bp TTGGCCCTTTGGTTTGAAGGTCTGGGAGCCCCACATTCAATGCGTTaGGTACCATGTTGTCCAGATGCGGCTTGGGCCCAACAGGATGAG +
Preference number: 5 (lower is better)
Translates to: LALWFEGLGAPHSMR*VPCCPDAAWAQQDE
Trigger: CTCATCCTGTTGGGCCCAAGCCGCATCTGGACAACATGGTACCCAACGCATTGAATGTGGGGCTCCCAGACCTTCAAACCAAAGGGCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000402203.5
ENST00000446273.1
ENST00000454349.7
ENST00000467658.1
CDS-3UTR CAA 90 bp ACTTTCAGGTCAGCACGAGTGAAGCGTGGTTTCCTGAGCTTGAAGGGCTCTGAAATGGAGAGCTGCCAATaGGGCTGGCGGCCGTTGGTT +
Preference number: 5 (lower is better)
Translates to: TFRSARVKRGFLSLKGSEMESCQ*GWRPLV
Trigger: AACCAACGGCCGCCAGCCCAATTGGCAGCTCTCCAT...TTCAGAGCCCTTCAAGCTCAGGAAACCACGCTTCACTCGTGCTGACCTGAAAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp CACACACATGTGCGTCCCCCTTGCTCAGGATGTCTGGGTGTATGTACGAAGGCAGCATTGTTGCCACCATaGACTGGTGGCGATGGAGAG +
Preference number: 5 (lower is better)
Translates to: HTHVRPPCSGCLGVCTKAALLPP*TGGDGE
Trigger: CTCTCCATCGCCACCAGTCAATGGTGGCAACAATGC...TGCCTTCGTACATACACCCAGACATCCTGAGCAAGGGGGACGCACATGTGTGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp CAAAGGGTAAAAGCGTGCTGCCCGCTCTGCACACGGCAGAAGCTGGAAAATGCCACCCTTTTGGCATTGTaGCCACCATTGACTGGTGGC +
Preference number: 5 (lower is better)
Translates to: QRVKACCPLCTRQKLENATLLAL*PPLTGG
Trigger: GCCACCAGTCAATGGTGGCAACAATGCCAAAAGGGT...GGCATTTTCCAGCTTCTGCCGTGTGCAGAGCGGGCAGCACGCTTTTACCCTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp AACTGCAGGCCCCCTGGAATTTACCTGGCCATCAGACCTGCCAGCAACAGTGGCCGTTTTAGTAACACTTaGTGGTCCTGCTGGCAACGG +
Preference number: 5 (lower is better)
Translates to: NCRPPGIYLAIRPASNSGRFSNT*WSCWQR
Trigger: CCGTTGCCAGCAGGACCACAAAGTGTTACTAAAACG...GCCACTGTTGCTGGCAGGTCTGATGGCCAGGTAAATTCCAGGGGGCCTGCAGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp CACACACATGTGCGTCCCCCTTGCTCAGGATGTCTGGGTGTATGTACGAAGGCACAGCGCTCCTGTCACTaGTGCGTTGTTTGGGTTTGC +
Preference number: 5 (lower is better)
Translates to: HTHVRPPCSGCLGVCTKAQRSCH*CVVWVC
Trigger: GCAAACCCAAACAACGCACAAGTGACAGGAGCGCTG...TGCCTTCGTACATACACCCAGACATCCTGAGCAAGGGGGACGCACATGTGTGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp AACTTTTACAGCCACCCCTCTGGGAGTTGTACACACCTTTCAGTAGCCGAAGGGTTAGGCTTCATGGCATaGGGAGCGTTGGCGGGCGTG +
Preference number: 5 (lower is better)
Translates to: NFYSHPSGSCTHLSVAEGLGFMA*GALAGV
Trigger: CACGCCCGCCAACGCTCCCAATGCCATGAAGCCTAA...CCCTTCGGCTACTGAAAGGTGTGTACAACTCCCAGAGGGGTGGCTGTAAAAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301923.13
ENST00000454349.7
CDS-3UTR CAA 90 bp AATGAAGCTGAAGGAATCGAGTGGGAGGGACTGTTCTCCTCTTTGGGGGAGCTCCTCCTTGTCCCCAGCTaGCTGAGTTGTGGGAGGAAG +
Preference number: 5 (lower is better)
Translates to: NEAEGIEWEGLFSSLGELLLVPS*LSCGRK
Trigger: CTTCCTCCCACAACTCAGCAAGCTGGGGACAAGGAG...GAGCTCCCCCAAAGAGGAGAACAGTCCCTCCCACTCGATTCCTTCAGCTTCATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp GATCTGGTCCCGGTGGCCACACGCATGCGGGCAGTGTGGGTGCTGAGCTGCTGGACAGACAAATCCATTTaGCTGCTTGGATTATCTTCA +
Preference number: 5 (lower is better)
Translates to: DLVPVATRMRAVWVLSCWTDKSI*LLGLSS
Trigger: TGAAGATAATCCAAGCAGCAAAATGGATTTGTCTGT...CCAGCAGCTCAGCACCCACACTGCCCGCATGCGTGTGGCCACCGGGACCAGATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp AACTGCAGGCCCCCTGGAATTTACCTGGCCATCAGACCTGCCAGCAACAGTGGCGTGGTTCCCATGTCTTaGGAATTAGGTGGACGGAAC +
Preference number: 5 (lower is better)
Translates to: NCRPPGIYLAIRPASNSGVVPMS*ELGGRN
Trigger: GTTCCGTCCACCTAATTCCAAAGACATGGGAACCAC...GCCACTGTTGCTGGCAGGTCTGATGGCCAGGTAAATTCCAGGGGGCCTGCAGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp CTCTCCACACTCGAGACTTGCAGATGCACGTGTGACGGTGCCATTCTTCGTATAGCGTTGGGTACCATGTaGTCCAGATGCGGCTTGGGC +
Preference number: 5 (lower is better)
Translates to: LSTLETCRCTCDGAILRIALGTM*SRCGLG
Trigger: GCCCAAGCCGCATCTGGACAACATGGTACCCAACGC...TATACGAAGAATGGCACCGTCACACGTGCATCTGCAAGTCTCGAGTGTGGAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR CAA 90 bp AATGAAGCTGAAGGAATCGAGTGGGAGGGACTGTTCTCCTCTTTGGGGGAGCTCGATGATGGTTTGGGGTaGGTCAGACCAGGAGGTGGG +
Preference number: 5 (lower is better)
Translates to: NEAEGIEWEGLFSSLGELDDGLG*VRPGGG
Trigger: CCCACCTCCTGGTCTGACCAACCCCAAACCATCATC...GAGCTCCCCCAAAGAGGAGAACAGTCCCTCCCACTCGATTCCTTCAGCTTCATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp CACACACATGTGCGTCCCCCTTGCTCAGGATGTCTGGGTGTATGTACGAAGGCACAGGGAGATGATGGTTaGGGGTTGGTCAGACCAGGA +
Preference number: 5 (lower is better)
Translates to: HTHVRPPCSGCLGVCTKAQGDDG*GLVRPG
Trigger: TCCTGGTCTGACCAACCCCAAACCATCATCTCCCTG...TGCCTTCGTACATACACCCAGACATCCTGAGCAAGGGGGACGCACATGTGTGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp ACTTTCAGGTCAGCACGAGTGAAGCGTGGTTTCCTGAGCTTGAAGGGCTCTGAACCGCACGACAGCACTTaGCTCCACACAGAGAGCGGT +
Preference number: 5 (lower is better)
Translates to: TFRSARVKRGFLSLKGSEPHDST*LHTESG
Trigger: ACCGCTCTCTGTGTGGAGCAAAGTGCTGTCGTGCGG...TTCAGAGCCCTTCAAGCTCAGGAAACCACGCTTCACTCGTGCTGACCTGAAAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp ACTAAAGCGGTTTTAGAGAAATTGCAGGCAGCAACCCCACCCACTCCCTTTACCTGGCTCGCAGGAGCCTaGGGATATGCTCCTGGCCCA +
Preference number: 5 (lower is better)
Translates to: TKAVLEKLQAATPPTPFTWLAGA*GYAPGP
Trigger: TGGGCCAGGAGCATATCCCAAGGCTCCTGCGAGCCA...GGTAAAGGGAGTGGGTGGGGTTGCTGCCTGCAATTTCTCTAAAACCGCTTTAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp GTATGCCACAATCACTCGGGATCTGGTCCCGGTGGCCACACGCATGCGGGCAGTACTTTCGTTACTTTTTaGGGTGGCGGTAGGAGGTTA +
Preference number: 5 (lower is better)
Translates to: VCHNHSGSGPGGHTHAGSTFVTF*GGGRRL
Trigger: TAACCTCCTACCGCCACCCAAAAAAGTAACGAAAGT...ACTGCCCGCATGCGTGTGGCCACCGGGACCAGATCCCGAGTGATTGTGGCATAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp AATGAAGCTGAAGGAATCGAGTGGGAGGGACTGTTCTCCTCTTTGGGGGAGCTCCCTGAACCACATTGGTaGACAGGAACTGCAGGCCCC +
Preference number: 5 (lower is better)
Translates to: NEAEGIEWEGLFSSLGELPEPHW*TGTAGP
Trigger: GGGGCCTGCAGTTCCTGTCAACCAATGTGGTTCAGG...GAGCTCCCCCAAAGAGGAGAACAGTCCCTCCCACTCGATTCCTTCAGCTTCATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp CAAAGGGTAAAAGCGTGCTGCCCGCTCTGCACACGGCAGAAGCTGGAAAATGCCCAAGGGTGCAGAATCTaGTGCACGTGTCTCTGTGAG +
Preference number: 5 (lower is better)
Translates to: QRVKACCPLCTRQKLENAQGCRI*CTCLCE
Trigger: CTCACAGAGACACGTGCACAAGATTCTGCACCCTTG...GGCATTTTCCAGCTTCTGCCGTGTGCAGAGCGGGCAGCACGCTTTTACCCTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp GATCTGGTCCCGGTGGCCACACGCATGCGGGCAGTGTGGGTGCTGAGCTGCTGGTGTTTGTGTGCAAAGTaGGAAAGCTGCCTTTTAAAA +
Preference number: 5 (lower is better)
Translates to: DLVPVATRMRAVWVLSCWCLCAK*ESCLLK
Trigger: TTTTAAAAGGCAGCTTTCCAACTTTGCACACAAACA...CCAGCAGCTCAGCACCCACACTGCCCGCATGCGTGTGGCCACCGGGACCAGATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp ATGCGGGCAGTGTGGGTGCTGAGCTGCTGGAGGAGTAGCTCTCCACTCCCTGACCAGATGAGAGGATTTTaGCTGTACCTTCCTGTTACC +
Preference number: 5 (lower is better)
Translates to: MRAVWVLSCWRSSSPLPDQMRGF*LYLPVT
Trigger: GGTAACAGGAAGGTACAGCAAAAATCCTCTCATCTG...GTCAGGGAGTGGAGAGCTACTCCTCCAGCAGCTCAGCACCCACACTGCCCGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp GTATGCCACAATCACTCGGGATCTGGTCCCGGTGGCCACACGCATGCGGGCAGTCAGATGAGAGGATTTTaGCTGTACCTTCCTGTTACC +
Preference number: 5 (lower is better)
Translates to: VCHNHSGSGPGGHTHAGSQMRGF*LYLPVT
Trigger: GGTAACAGGAAGGTACAGCAAAAATCCTCTCATCTG...ACTGCCCGCATGCGTGTGGCCACCGGGACCAGATCCCGAGTGATTGTGGCATAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp ATGCGGGCAGTGTGGGTGCTGAGCTGCTGGAGGAGTAGCTCTCCACTCCCTGACGTTTCCAGAATTGCTTaGTCCAGAGACTGTGTCAGT +
Preference number: 5 (lower is better)
Translates to: MRAVWVLSCWRSSSPLPDVSRIA*SRDCVS
Trigger: ACTGACACAGTCTCTGGACAAAGCAATTCTGGAAAC...GTCAGGGAGTGGAGAGCTACTCCTCCAGCAGCTCAGCACCCACACTGCCCGCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp ATGCGGGCAGTGTGGGTGCTGAGCTGCTGGAGGAGTAGCTCTCCACTCCCTGACCCATTGTTTCCAGAATaGCTTTGTCCAGAGACTGTG +
Preference number: 5 (lower is better)
Translates to: MRAVWVLSCWRSSSPLPDPLFPE*LCPETV
Trigger: CACAGTCTCTGGACAAAGCAATTCTGGAAACAATGG...GTCAGGGAGTGGAGAGCTACTCCTCCAGCAGCTCAGCACCCACACTGCCCGCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp CAAAGGGTAAAAGCGTGCTGCCCGCTCTGCACACGGCAGAAGCTGGAAAATGCCCAGCCTCCTGTGTTCTaGGGGTCTTTCCACTCTGTA +
Preference number: 5 (lower is better)
Translates to: QRVKACCPLCTRQKLENAQPPVF*GSFHSV
Trigger: TACAGAGTGGAAAGACCCCAAGAACACAGGAGGCTG...GGCATTTTCCAGCTTCTGCCGTGTGCAGAGCGGGCAGCACGCTTTTACCCTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp GTATGCCACAATCACTCGGGATCTGGTCCCGGTGGCCACACGCATGCGGGCAGTCAGACACAGGTTTACTaGCAGAACTTTCCCAATTGC +
Preference number: 5 (lower is better)
Translates to: VCHNHSGSGPGGHTHAGSQTQVY*QNFPNC
Trigger: GCAATTGGGAAAGTTCTGCAAGTAAACCTGTGTCTG...ACTGCCCGCATGCGTGTGGCCACCGGGACCAGATCCCGAGTGATTGTGGCATAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp ACTAAAGCGGTTTTAGAGAAATTGCAGGCAGCAACCCCACCCACTCCCTTTACCTTGGGGTGGGCAGGTTaGGTTCTCGAGGTGCTGGGC +
Preference number: 5 (lower is better)
Translates to: TKAVLEKLQAATPPTPFTLGWAG*VLEVLG
Trigger: GCCCAGCACCTCGAGAACCAAACCTGCCCACCCCAA...GGTAAAGGGAGTGGGTGGGGTTGCTGCCTGCAATTTCTCTAAAACCGCTTTAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp AACTGCAGGCCCCCTGGAATTTACCTGGCCATCAGACCTGCCAGCAACAGTGGCGGGCACTTTGGTTTTTaGTTCCGTGACCTTCTGAGT +
Preference number: 5 (lower is better)
Translates to: NCRPPGIYLAIRPASNSGGHFGF*FRDLLS
Trigger: ACTCAGAAGGTCACGGAACAAAAAACCAAAGTGCCC...GCCACTGTTGCTGGCAGGTCTGATGGCCAGGTAAATTCCAGGGGGCCTGCAGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp CAAAGGGTAAAAGCGTGCTGCCCGCTCTGCACACGGCAGAAGCTGGAAAATGCCCGTTTTAGTAACACTTaGTGGTCCTGCTGGCAACGG +
Preference number: 5 (lower is better)
Translates to: QRVKACCPLCTRQKLENARFSNT*WSCWQR
Trigger: CCGTTGCCAGCAGGACCACAAAGTGTTACTAAAACG...GGCATTTTCCAGCTTCTGCCGTGTGCAGAGCGGGCAGCACGCTTTTACCCTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp AATGAAGCTGAAGGAATCGAGTGGGAGGGACTGTTCTCCTCTTTGGGGGAGCTCCAGCGCTCCTGTCACTaGTGCGTTGTTTGGGTTTGC +
Preference number: 5 (lower is better)
Translates to: NEAEGIEWEGLFSSLGELQRSCH*CVVWVC
Trigger: GCAAACCCAAACAACGCACAAGTGACAGGAGCGCTG...GAGCTCCCCCAAAGAGGAGAACAGTCCCTCCCACTCGATTCCTTCAGCTTCATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp CCACACTCGAGACTTGCAGATGCACGTGTGACGGTGCCATTCTTCGTATATGTTTTAGGCTTCATGGCATaGGGAGCGTTGGCGGGCGTG +
Preference number: 5 (lower is better)
Translates to: PHSRLADARVTVPFFVYVLGFMA*GALAGV
Trigger: CACGCCCGCCAACGCTCCCAATGCCATGAAGCCTAA...AACATATACGAAGAATGGCACCGTCACACGTGCATCTGCAAGTCTCGAGTGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR CAA 90 bp CCCGGCACCTCCACACTCTCCACACTCGAGACTTGCAGATGCACGTGTGACGGTCCGTCTTGCATAGATTaGGAATTAGGCTTCATGGCA +
Preference number: 5 (lower is better)
Translates to: PGTSTLSTLETCRCTCDGPSCID*ELGFMA
Trigger: TGCCATGAAGCCTAATTCCAAATCTATGCAAGACGG...ACCGTCACACGTGCATCTGCAAGTCTCGAGTGTGGAGAGTGTGGAGGTGCCGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR CAA 90 bp GTATGCCACAATCACTCGGGATCTGGTCCCGGTGGCCACACGCATGCGGGCAGTACTATAGCGCCATTTTaGTGCATATTGGCTTCCTGT +
Preference number: 5 (lower is better)
Translates to: VCHNHSGSGPGGHTHAGSTIAPF*CILASC
Trigger: ACAGGAAGCCAATATGCACAAAAATGGCGCTATAGT...ACTGCCCGCATGCGTGTGGCCACCGGGACCAGATCCCGAGTGATTGTGGCATAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp CCGGCACCTCCACACTCTCCACACTCGAGACTTGCAGATGCACGTGTGACGGTGGATCTGGGGACCATGTaGATTTGTAATCAGGGAACT +
Preference number: 5 (lower is better)
Translates to: PAPPHSPHSRLADARVTVDLGTM*ICNQGT
Trigger: AGTTCCCTGATTACAAATCAACATGGTCCCCAGATC...CACCGTCACACGTGCATCTGCAAGTCTCGAGTGTGGAGAGTGTGGAGGTGCCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR CAA 90 bp ACTTTCAGGTCAGCACGAGTGAAGCGTGGTTTCCTGAGCTTGAAGGGCTCTGAATTGGCCGCCTCCTGTTaGGTGCTGTATCGGATCAGG +
Preference number: 5 (lower is better)
Translates to: TFRSARVKRGFLSLKGSELAASC*VLYRIR
Trigger: CCTGATCCGATACAGCACCAAACAGGAGGCGGCCAA...TTCAGAGCCCTTCAAGCTCAGGAAACCACGCTTCACTCGTGCTGACCTGAAAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp GCAGCTGCCAGAATACTCACGGGTGCATCTTCATGCATGTTTGTCTACGTGGGTTTGGCCGCCTCCTGTTaGGTGCTGTATCGGATCAGG +
Preference number: 5 (lower is better)
Translates to: AAARILTGASSCMFVYVGLAASC*VLYRIR
Trigger: CCTGATCCGATACAGCACCAAACAGGAGGCGGCCAA...ACCCACGTAGACAAACATGCATGAAGATGCACCCGTGAGTATTCTGGCAGCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR CAA 90 bp ACTAAAGCGGTTTTAGAGAAATTGCAGGCAGCAACCCCACCCACTCCCTTTACCTGTAGGGGGCTGAGCTaGTGCCAGAAAGCGGCTGAC +
Preference number: 5 (lower is better)
Translates to: TKAVLEKLQAATPPTPFTCRGLS*CQKAAD
Trigger: GTCAGCCGCTTTCTGGCACAAGCTCAGCCCCCTACA...GGTAAAGGGAGTGGGTGGGGTTGCTGCCTGCAATTTCTCTAAAACCGCTTTAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp CCCCTGTCTCCTCTCCCAAGTCCCAGAATCTCTTCCACTCAACTCTACACTGTGGCGGTTTTAGAGAAATaGCAGGCAGCAACCCCACCC +
Preference number: 5 (lower is better)
Translates to: PLSPLPSPRISSTQLYTVAVLEK*QAATPP
Trigger: GGGTGGGGTTGCTGCCTGCAATTTCTCTAAAACCGC...CACAGTGTAGAGTTGAGTGGAAGAGATTCTGGGACTTGGGAGAGGAGACAGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp AACTGCAGGCCCCCTGGAATTTACCTGGCCATCAGACCTGCCAGCAACAGTGGCCTGAACCAAGAAAGGTaGAGAGCTCCAGGTATTGTG +
Preference number: 5 (lower is better)
Translates to: NCRPPGIYLAIRPASNSGLNQER*RAPGIV
Trigger: CACAATACCTGGAGCTCTCAACCTTTCTTGGTTCAG...GCCACTGTTGCTGGCAGGTCTGATGGCCAGGTAAATTCCAGGGGGCCTGCAGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp ATGCGGGCAGTGTGGGTGCTGAGCTGCTGGAGGAGTAGCTCTCCACTCCCTGACTGGAATTTGCATAATTaGAAGCAGCAGCACCTCCAA +
Preference number: 5 (lower is better)
Translates to: MRAVWVLSCWRSSSPLPDWNLHN*KQQHLQ
Trigger: TTGGAGGTGCTGCTGCTTCAAATTATGCAAATTCCA...GTCAGGGAGTGGAGAGCTACTCCTCCAGCAGCTCAGCACCCACACTGCCCGCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp CCCGGCACCTCCACACTCTCCACACTCGAGACTTGCAGATGCACGTGTGACGGTGTTTCCAGAATTGCTTaGTCCAGAGACTGTGTCAGT +
Preference number: 5 (lower is better)
Translates to: PGTSTLSTLETCRCTCDGVSRIA*SRDCVS
Trigger: ACTGACACAGTCTCTGGACAAAGCAATTCTGGAAAC...ACCGTCACACGTGCATCTGCAAGTCTCGAGTGTGGAGAGTGTGGAGGTGCCGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR CAA 90 bp CAAAGGGTAAAAGCGTGCTGCCCGCTCTGCACACGGCAGAAGCTGGAAAATGCCGTTGCTTCCAGTGCTTaGACCTCCAACTTCACTTCC +
Preference number: 5 (lower is better)
Translates to: QRVKACCPLCTRQKLENAVASSA*TSNFTS
Trigger: GGAAGTGAAGTTGGAGGTCAAAGCACTGGAAGCAAC...GGCATTTTCCAGCTTCTGCCGTGTGCAGAGCGGGCAGCACGCTTTTACCCTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp CACACACATGTGCGTCCCCCTTGCTCAGGATGTCTGGGTGTATGTACGAAGGCAGAAGCTAGGCTTGCATaGCCACCATTACCCCAAGTC +
Preference number: 5 (lower is better)
Translates to: HTHVRPPCSGCLGVCTKAEARLA*PPLPQV
Trigger: GACTTGGGGTAATGGTGGCAATGCAAGCCTAGCTTC...TGCCTTCGTACATACACCCAGACATCCTGAGCAAGGGGGACGCACATGTGTGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp CACACACATGTGCGTCCCCCTTGCTCAGGATGTCTGGGTGTATGTACGAAGGCACCGATTTACTGGTCATaGGGGTGGGCAGGTTTGGTT +
Preference number: 5 (lower is better)
Translates to: HTHVRPPCSGCLGVCTKAPIYWS*GWAGLV
Trigger: AACCAAACCTGCCCACCCCAATGACCAGTAAATCGG...TGCCTTCGTACATACACCCAGACATCCTGAGCAAGGGGGACGCACATGTGTGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp CCCCTGTCTCCTCTCCCAAGTCCCAGAATCTCTTCCACTCAACTCTACACTGTGGCAGGTGGTGTGCTTTaGCTCCAGACTGATGCCGAT +
Preference number: 5 (lower is better)
Translates to: PLSPLPSPRISSTQLYTVAGGVL*LQTDAD
Trigger: ATCGGCATCAGTCTGGAGCAAAAGCACACCACCTGC...CACAGTGTAGAGTTGAGTGGAAGAGATTCTGGGACTTGGGAGAGGAGACAGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454349.7
CDS-3UTR CAA 90 bp AACTTTTACAGCCACCCCTCTGGGAGTTGTACACACCTTTCAGTAGCCGAAGGGTCTAGCAGCGAAGTTTaGGGGGTTGAGCCCTGTGCC +
Preference number: 5 (lower is better)
Translates to: NFYSHPSGSCTHLSVAEGSSSEV*GVEPCA
Trigger: GGCACAGGGCTCAACCCCCAAAACTTCGCTGCTAGA...CCCTTCGGCTACTGAAAGGTGTGTACAACTCCCAGAGGGGTGGCTGTAAAAGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000454349.7
CDS GCA 90 bp ATTGCTTTGTCCAGAGACTGTGTCAGTTCCAGAAGGCCCCCTAGCTaGACCCCAAGATCCAACACTCCCAGTCTTTCGATCTCCAGTGCT +
Preference number: 5 (lower is better)
Translates to: IALSRDCVSSRRPPS*TPRSNTPSLSISSA
Trigger: AGCACTGGAGATCGAAAGACTGGGAGTGTTGGATCTTGGGGTGCAGCTAGGGGGCCTTCTGGAACTGACACAGTCTCTGGACAAAGCAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335727.13
ENST00000446273.1
ENST00000454349.7
CDS GCA 90 bp GGGCCTGTACGACCGACGGCCAGAGTTATGACTGTCACTACTTCCTaGTTTGTGGTTGCTTCCAGTGCTTTGACCTCCAACTTCACTTCC +
Preference number: 5 (lower is better)
Translates to: GPVRPTARVMTVTTS*FVVASSALTSNFTS
Trigger: GGAAGTGAAGTTGGAGGTCAAAGCACTGGAAGCAACCACAAAGCAGGAAGTAGTGACAGTCATAACTCTGGCCGTCGGTCGTACAGGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335727.13
ENST00000446273.1
ENST00000454349.7
CDS CCA 90 bp GGTGGAGATTTGGCAGGTAACCAGCTATCACCAGCAGGACCCGTATaGCCACCCAGTGTGTCACCAGGGATGATATCAAACTGGTTGTAC +
Preference number: 5 (lower is better)
Translates to: GGDLAGNQLSPAGPV*PPSVSPGMISNWLY
Trigger: GTACAACCAGTTTGATATCATCCCTGGTGACACACTGGGTGGCCATACGGGTCCTGCTGGTGATAGCTGGTTACCTGCCAAATCTCCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000402203.5
ENST00000446273.1
ENST00000454349.7
CDS CCA 90 bp AGACTGGCACTGGCTCCCTTTTCCTTTGTTACTAGTGGTGCTTCCTaGCAGAGTGCTCTTCTCAGAGCCAGGGTTCGAGGCACTGTTGTT +
Preference number: 5 (lower is better)
Translates to: RLALAPFSFVTSGAS*QSALLRARVRGTVV
Trigger: AACAACAGTGCCTCGAACCCTGGCTCTGAGAAGAGCACTCTGCCAGGAAGCACCACTAGTAACAAAGGAAAAGGGAGCCAGTGCCAGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS CCA 90 bp CCCTTTCCTAGAAGTTCCTTCTTGGACCAGTGCTGGCCAGGCAGATaGGTTGCTATTTGGGTTAAAGTTGCTGAAGCCAGAGCCAGGTCC +
Preference number: 5 (lower is better)
Translates to: PFPRSSFLDQCWPGR*VAIWVKVAEARARS
Trigger: GGACCTGGCTCTGGCTTCAGCAACTTTAACCCAAATAGCAACCCATCTGCCTGGCCAGCACTGGTCCAAGAAGGAACTTCTAGGAAAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335727.13
ENST00000446273.1
ENST00000454349.7
CDS CCA 90 bp GGTTGCTTCCAGTGCTTTGACCTCCAACTTCACTTCCTGTGGAGCTaGAAGATCTTCCCCAACAGGGAGCCTGGGCATTGCCTTGGTTTT +
Preference number: 5 (lower is better)
Translates to: GCFQCFDLQLHFLWS*KIFPNREPGHCLGF
Trigger: AAAACCAAGGCAATGCCCAGGCTCCCTGTTGGGGAAGATCTTCCAGCTCCACAGGAAGTGAAGTTGGAGGTCAAAGCACTGGAAGCAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335727.13
ENST00000446273.1
ENST00000454349.7
CDS CCA 90 bp CTTTGTGGTTGCTTCCAGTGCTTTGACCTCCAACTTCACTTCCTGTaGAGCTGGAAGATCTTCCCCAACAGGGAGCCTGGGCATTGCCTT +
Preference number: 5 (lower is better)
Translates to: LCGCFQCFDLQLHFL*SWKIFPNREPGHCL
Trigger: AAGGCAATGCCCAGGCTCCCTGTTGGGGAAGATCTTCCAGCTCCACAGGAAGTGAAGTTGGAGGTCAAAGCACTGGAAGCAACCACAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335727.13
ENST00000446273.1
ENST00000454349.7
CDS-3UTR CAA 90 bp CAAAGGGTAAAAGCGTGCTGCCCGCTCTGCACACGGCAGAAGCTGGAAAATGCCGGGCACTTTGGTTTTTaGTTCCGTGACCTTCTGAGT +
Preference number: 5 (lower is better)
Translates to: QRVKACCPLCTRQKLENAGHFGF*FRDLLS
Trigger: ACTCAGAAGGTCACGGAACAAAAAACCAAAGTGCCC...GGCATTTTCCAGCTTCTGCCGTGTGCAGAGCGGGCAGCACGCTTTTACCCTTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp ACTTTCAGGTCAGCACGAGTGAAGCGTGGTTTCCTGAGCTTGAAGGGCTCTGAATTGGGCTGGCGGCCGTaGGTTGGCTTAAACTTGGTT +
Preference number: 5 (lower is better)
Translates to: TFRSARVKRGFLSLKGSELGWRP*VGLNLV
Trigger: AACCAAGTTTAAGCCAACCAACGGCCGCCAGCCCAA...TTCAGAGCCCTTCAAGCTCAGGAAACCACGCTTCACTCGTGCTGACCTGAAAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp AACTTTTACAGCCACCCCTCTGGGAGTTGTACACACCTTTCAGTAGCCGAAGGGGGCACTGCCACCCTTTaGGCATTGTTGCCACCATTG +
Preference number: 5 (lower is better)
Translates to: NFYSHPSGSCTHLSVAEGGTATL*ALLPPL
Trigger: CAATGGTGGCAACAATGCCAAAAGGGTGGCAGTGCC...CCCTTCGGCTACTGAAAGGTGTGTACAACTCCCAGAGGGGTGGCTGTAAAAGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp AATGAAGCTGAAGGAATCGAGTGGGAGGGACTGTTCTCCTCTTTGGGGGAGCTCCCTGTCACTTGTGCGTaGTTTGGGTTTGCTCCAGGT +
Preference number: 5 (lower is better)
Translates to: NEAEGIEWEGLFSSLGELPVTCA*FGFAPG
Trigger: ACCTGGAGCAAACCCAAACAACGCACAAGTGACAGG...GAGCTCCCCCAAAGAGGAGAACAGTCCCTCCCACTCGATTCCTTCAGCTTCATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp AACTTTTACAGCCACCCCTCTGGGAGTTGTACACACCTTTCAGTAGCCGAAGGGCAGGACTGCTTTCATTaGGCTCACCCCAAGCGGAAG +
Preference number: 5 (lower is better)
Translates to: NFYSHPSGSCTHLSVAEGQDCFH*AHPKRK
Trigger: CTTCCGCTTGGGGTGAGCCAAATGAAAGCAGTCCTG...CCCTTCGGCTACTGAAAGGTGTGTACAACTCCCAGAGGGGTGGCTGTAAAAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000301923.13
ENST00000454349.7
CDS-3UTR CAA 90 bp CCACACTCGAGACTTGCAGATGCACGTGTGACGGTGCCATTCTTCGTATATGTTCTCCTTGTCCCCAGCTaGCTGAGTTGTGGGAGGAAG +
Preference number: 5 (lower is better)
Translates to: PHSRLADARVTVPFFVYVLLVPS*LSCGRK
Trigger: CTTCCTCCCACAACTCAGCAAGCTGGGGACAAGGAG...AACATATACGAAGAATGGCACCGTCACACGTGCATCTGCAAGTCTCGAGTGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR CAA 90 bp ATGCGGGCAGTGTGGGTGCTGAGCTGCTGGAGGAGTAGCTCTCCACTCCCTGACTTCATCCATGAATCATaGTTTCCTCCTTTGAGTGAG +
Preference number: 5 (lower is better)
Translates to: MRAVWVLSCWRSSSPLPDFIHES*FPPLSE
Trigger: CTCACTCAAAGGAGGAAACAATGATTCATGGATGAA...GTCAGGGAGTGGAGAGCTACTCCTCCAGCAGCTCAGCACCCACACTGCCCGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp GTATGCCACAATCACTCGGGATCTGGTCCCGGTGGCCACACGCATGCGGGCAGTTTCATCCATGAATCATaGTTTCCTCCTTTGAGTGAG +
Preference number: 5 (lower is better)
Translates to: VCHNHSGSGPGGHTHAGSFIHES*FPPLSE
Trigger: CTCACTCAAAGGAGGAAACAATGATTCATGGATGAA...ACTGCCCGCATGCGTGTGGCCACCGGGACCAGATCCCGAGTGATTGTGGCATAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp ATGCGGGCAGTGTGGGTGCTGAGCTGCTGGAGGAGTAGCTCTCCACTCCCTGACAATCCATTTTGCTGCTaGGATTATCTTCAGTCTGAC +
Preference number: 5 (lower is better)
Translates to: MRAVWVLSCWRSSSPLPDNPFCC*DYLQSD
Trigger: GTCAGACTGAAGATAATCCAAGCAGCAAAATGGATT...GTCAGGGAGTGGAGAGCTACTCCTCCAGCAGCTCAGCACCCACACTGCCCGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp AATTCAGCAGCTGCCAGAATACTCACGGGTGCATCTTCATGCATGTTTGTCTACAAACTGGGGAGGCACTaGCGCCCGGAGACTGGGAGA +
Preference number: 5 (lower is better)
Translates to: NSAAARILTGASSCMFVYKLGRH*RPETGR
Trigger: TCTCCCAGTCTCCGGGCGCAAGTGCCTCCCCAGTTT...GTAGACAAACATGCATGAAGATGCACCCGTGAGTATTCTGGCAGCTGCTGAATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR CAA 90 bp CACACACATGTGCGTCCCCCTTGCTCAGGATGTCTGGGTGTATGTACGAAGGCACTGTTGGGAAACTGCTaGAGCATTGAGGCAGAAACC +
Preference number: 5 (lower is better)
Translates to: HTHVRPPCSGCLGVCTKALLGNC*SIEAET
Trigger: GGTTTCTGCCTCAATGCTCAAGCAGTTTCCCAACAG...TGCCTTCGTACATACACCCAGACATCCTGAGCAAGGGGGACGCACATGTGTGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp CTTTGGTGGAAAAGACCCGGCACCTCCACACTCTCCACACTCGAGACTTGCAGACTGAAACTGGGGAATTaGTGGAAGCTGGCTCAGCAT +
Preference number: 5 (lower is better)
Translates to: LWWKRPGTSTLSTLETCRLKLGN*WKLAQH
Trigger: ATGCTGAGCCAGCTTCCACAAATTCCCCAGTTTCAG...TCTGCAAGTCTCGAGTGTGGAGAGTGTGGAGGTGCCGGGTCTTTTCCACCAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR CAA 90 bp ACTAAAGCGGTTTTAGAGAAATTGCAGGCAGCAACCCCACCCACTCCCTTTACCAGCCAGCTGCTGCTCTaGCTGTTGGCGTACAGCTTG +
Preference number: 5 (lower is better)
Translates to: TKAVLEKLQAATPPTPFTSQLLL*LLAYSL
Trigger: CAAGCTGTACGCCAACAGCAAGAGCAGCAGCTGGCT...GGTAAAGGGAGTGGGTGGGGTTGCTGCCTGCAATTTCTCTAAAACCGCTTTAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp AACTGCAGGCCCCCTGGAATTTACCTGGCCATCAGACCTGCCAGCAACAGTGGCCCATTTTTGTGCATATaGGCTTCCTGTGTGGCTACA +
Preference number: 5 (lower is better)
Translates to: NCRPPGIYLAIRPASNSGPFLCI*ASCVAT
Trigger: TGTAGCCACACAGGAAGCCAATATGCACAAAAATGG...GCCACTGTTGCTGGCAGGTCTGATGGCCAGGTAAATTCCAGGGGGCCTGCAGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp AATGAAGCTGAAGGAATCGAGTGGGAGGGACTGTTCTCCTCTTTGGGGGAGCTCATGATATCAAACTGGTaGTACGGTGACCCTCCCCGG +
Preference number: 5 (lower is better)
Translates to: NEAEGIEWEGLFSSLGELMISNW*YGDPPR
Trigger: CCGGGGAGGGTCACCGTACAACCAGTTTGATATCAT...GAGCTCCCCCAAAGAGGAGAACAGTCCCTCCCACTCGATTCCTTCAGCTTCATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp CAAAGGGTAAAAGCGTGCTGCCCGCTCTGCACACGGCAGAAGCTGGAAAATGCCGTTATCCCGCAGCAGTaGGTGGTCAGTATCTACAAT +
Preference number: 5 (lower is better)
Translates to: QRVKACCPLCTRQKLENAVIPQQ*VVSIYN
Trigger: ATTGTAGATACTGACCACCAACTGCTGCGGGATAAC...GGCATTTTCCAGCTTCTGCCGTGTGCAGAGCGGGCAGCACGCTTTTACCCTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp AATGAAGCTGAAGGAATCGAGTGGGAGGGACTGTTCTCCTCTTTGGGGGAGCTCGAAGGCAGCGAGGTGTaGAGGGAAGAATTAGACCCT +
Preference number: 5 (lower is better)
Translates to: NEAEGIEWEGLFSSLGELEGSEV*REELDP
Trigger: AGGGTCTAATTCTTCCCTCAACACCTCGCTGCCTTC...GAGCTCCCCCAAAGAGGAGAACAGTCCCTCCCACTCGATTCCTTCAGCTTCATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp TGTGCACGTGTCTCTGTGAGCACATTCACGGTGCATGCACCATTTTTGATGTCTAGTGCAGTTTGGGCCTaGGCCGCCTCCTGTTTGGTG +
Preference number: 5 (lower is better)
Translates to: CARVSVSTFTVHAPFLMSSAVWA*AASCLV
Trigger: CACCAAACAGGAGGCGGCCAAGGCCCAAACTGCACT...AGACATCAAAAATGGTGCATGCACCGTGAATGTGCTCACAGAGACACGTGCACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp TCTGAACCAAGAAAGGTTGAGAGCTCCAGGTATTGTGTGGAGAACATTCTGGAGCATGTGCAGTGCAGTTaGGGCCTTGGCCGCCTCCTG +
Preference number: 5 (lower is better)
Translates to: SEPRKVESSRYCVENILEHVQCS*GLGRLL
Trigger: CAGGAGGCGGCCAAGGCCCAAACTGCACTGCACATG...CTCCAGAATGTTCTCCACACAATACCTGGAGCTCTCAACCTTTCTTGGTTCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp AACTTTTACAGCCACCCCTCTGGGAGTTGTACACACCTTTCAGTAGCCGAAGGGGCGGTTTTAGAGAAATaGCAGGCAGCAACCCCACCC +
Preference number: 5 (lower is better)
Translates to: NFYSHPSGSCTHLSVAEGAVLEK*QAATPP
Trigger: GGGTGGGGTTGCTGCCTGCAATTTCTCTAAAACCGC...CCCTTCGGCTACTGAAAGGTGTGTACAACTCCCAGAGGGGTGGCTGTAAAAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp ACTAAAGCGGTTTTAGAGAAATTGCAGGCAGCAACCCCACCCACTCCCTTTACCACATGTGCGTCCCCCTaGCTCAGGATGTCTGGGTGT +
Preference number: 5 (lower is better)
Translates to: TKAVLEKLQAATPPTPFTTCASP*LRMSGC
Trigger: ACACCCAGACATCCTGAGCAAGGGGGACGCACATGT...GGTAAAGGGAGTGGGTGGGGTTGCTGCCTGCAATTTCTCTAAAACCGCTTTAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp AACTGCAGGCCCCCTGGAATTTACCTGGCCATCAGACCTGCCAGCAACAGTGGCTCCAAATCACTGCAGTaGTCACAATTACACACCTGG +
Preference number: 5 (lower is better)
Translates to: NCRPPGIYLAIRPASNSGSKSLQ*SQLHTW
Trigger: CCAGGTGTGTAATTGTGACAACTGCAGTGATTTGGA...GCCACTGTTGCTGGCAGGTCTGATGGCCAGGTAAATTCCAGGGGGCCTGCAGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp CAAAGGGTAAAAGCGTGCTGCCCGCTCTGCACACGGCAGAAGCTGGAAAATGCCCCACCTTTCCCATTTTaGGCGAACACACATAGGATG +
Preference number: 5 (lower is better)
Translates to: QRVKACCPLCTRQKLENAPPFPF*ANTHRM
Trigger: CATCCTATGTGTGTTCGCCAAAAATGGGAAAGGTGG...GGCATTTTCCAGCTTCTGCCGTGTGCAGAGCGGGCAGCACGCTTTTACCCTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp CACACACATGTGCGTCCCCCTTGCTCAGGATGTCTGGGTGTATGTACGAAGGCAGCCTGTGGAGTTCCATaGCTGCACTGGATTAACACT +
Preference number: 5 (lower is better)
Translates to: HTHVRPPCSGCLGVCTKAACGVP*LHWINT
Trigger: AGTGTTAATCCAGTGCAGCAATGGAACTCCACAGGC...TGCCTTCGTACATACACCCAGACATCCTGAGCAAGGGGGACGCACATGTGTGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp ATGCGGGCAGTGTGGGTGCTGAGCTGCTGGAGGAGTAGCTCTCCACTCCCTGACTTACGATACTGTGTGTaGCAAATAATGCCTAGACCA +
Preference number: 5 (lower is better)
Translates to: MRAVWVLSCWRSSSPLPDLRYCV*QIMPRP
Trigger: TGGTCTAGGCATTATTTGCAACACACAGTATCGTAA...GTCAGGGAGTGGAGAGCTACTCCTCCAGCAGCTCAGCACCCACACTGCCCGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp AATGAAGCTGAAGGAATCGAGTGGGAGGGACTGTTCTCCTCTTTGGGGGAGCTCTACCCTGGCACTAGATaGCTGGAAGAGATGGCAGCT +
Preference number: 5 (lower is better)
Translates to: NEAEGIEWEGLFSSLGELYPGTR*LEEMAA
Trigger: AGCTGCCATCTCTTCCAGCAATCTAGTGCCAGGGTA...GAGCTCCCCCAAAGAGGAGAACAGTCCCTCCCACTCGATTCCTTCAGCTTCATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp CCCCTGTCTCCTCTCCCAAGTCCCAGAATCTCTTCCACTCAACTCTACACTGTGCAAGGGTGCAGAATCTaGTGCACGTGTCTCTGTGAG +
Preference number: 5 (lower is better)
Translates to: PLSPLPSPRISSTQLYTVQGCRI*CTCLCE
Trigger: CTCACAGAGACACGTGCACAAGATTCTGCACCCTTG...CACAGTGTAGAGTTGAGTGGAAGAGATTCTGGGACTTGGGAGAGGAGACAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp GTATGCCACAATCACTCGGGATCTGGTCCCGGTGGCCACACGCATGCGGGCAGTTTTGTTGTCTGTTTTTaGGTTACGCAGAACAGGGAT +
Preference number: 5 (lower is better)
Translates to: VCHNHSGSGPGGHTHAGSFVVCF*VTQNRD
Trigger: ATCCCTGTTCTGCGTAACCAAAAAACAGACAACAAA...ACTGCCCGCATGCGTGTGGCCACCGGGACCAGATCCCGAGTGATTGTGGCATAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp CCCCTGTCTCCTCTCCCAAGTCCCAGAATCTCTTCCACTCAACTCTACACTGTGGGGTTCGAGGCACTGTaGTTATCGGTGGTGTTTTCG +
Preference number: 5 (lower is better)
Translates to: PLSPLPSPRISSTQLYTVGFEAL*LSVVFS
Trigger: CGAAAACACCACCGATAACAACAGTGCCTCGAACCC...CACAGTGTAGAGTTGAGTGGAAGAGATTCTGGGACTTGGGAGAGGAGACAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp CAAAGGGTAAAAGCGTGCTGCCCGCTCTGCACACGGCAGAAGCTGGAAAATGCCCTATTTGGGTTAAAGTaGCTGAAGCCAGAGCCAGGT +
Preference number: 5 (lower is better)
Translates to: QRVKACCPLCTRQKLENALFGLK*LKPEPG
Trigger: ACCTGGCTCTGGCTTCAGCAACTTTAACCCAAATAG...GGCATTTTCCAGCTTCTGCCGTGTGCAGAGCGGGCAGCACGCTTTTACCCTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp CCCGGCACCTCCACACTCTCCACACTCGAGACTTGCAGATGCACGTGTGACGGTATCAGTGTTATGAATTaGAGCCTGTTCTCTGCCAGA +
Preference number: 5 (lower is better)
Translates to: PGTSTLSTLETCRCTCDGISVMN*SLFSAR
Trigger: TCTGGCAGAGAACAGGCTCAAATTCATAACACTGAT...ACCGTCACACGTGCATCTGCAAGTCTCGAGTGTGGAGAGTGTGGAGGTGCCGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR CAA 90 bp GTATGCCACAATCACTCGGGATCTGGTCCCGGTGGCCACACGCATGCGGGCAGTCCCAAGAGTCATTTTTaGACCCAGTTGATTTCTGAA +
Preference number: 5 (lower is better)
Translates to: VCHNHSGSGPGGHTHAGSPKSHF*TQLISE
Trigger: TTCAGAAATCAACTGGGTCAAAAAATGACTCTTGGG...ACTGCCCGCATGCGTGTGGCCACCGGGACCAGATCCCGAGTGATTGTGGCATAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp AATGAAGCTGAAGGAATCGAGTGGGAGGGACTGTTCTCCTCTTTGGGGGAGCTCCCTTCACCCCATTTGTaGTCATTAGAGTCCTGGGGG +
Preference number: 5 (lower is better)
Translates to: NEAEGIEWEGLFSSLGELPSPHL*SLESWG
Trigger: CCCCCAGGACTCTAATGACAACAAATGGGGTGAAGG...GAGCTCCCCCAAAGAGGAGAACAGTCCCTCCCACTCGATTCCTTCAGCTTCATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp CAGCTGCCAGAATACTCACGGGTGCATCTTCATGCATGTTTGTCTACGTGGGTGATTTCCCCTCAGGCCTaGGCACCTCTTCAATGTCCC +
Preference number: 5 (lower is better)
Translates to: QLPEYSRVHLHACLSTWVISPQA*APLQCP
Trigger: GGGACATTGAAGAGGTGCCAAGGCCTGAGGGGAAAT...CACCCACGTAGACAAACATGCATGAAGATGCACCCGTGAGTATTCTGGCAGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR CAA 90 bp ACTTTCAGGTCAGCACGAGTGAAGCGTGGTTTCCTGAGCTTGAAGGGCTCTGAACACCCCTCAGTTCCTTaGTCAGATTTCCCCTCAGGC +
Preference number: 5 (lower is better)
Translates to: TFRSARVKRGFLSLKGSEHPSVP*SDFPSG
Trigger: GCCTGAGGGGAAATCTGACAAAGGAACTGAGGGGTG...TTCAGAGCCCTTCAAGCTCAGGAAACCACGCTTCACTCGTGCTGACCTGAAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp CTCTCCACACTCGAGACTTGCAGATGCACGTGTGACGGTGCCATTCTTCGTATACACCCCTCAGTTCCTTaGTCAGATTTCCCCTCAGGC +
Preference number: 5 (lower is better)
Translates to: LSTLETCRCTCDGAILRIHPSVP*SDFPSG
Trigger: GCCTGAGGGGAAATCTGACAAAGGAACTGAGGGGTG...TATACGAAGAATGGCACCGTCACACGTGCATCTGCAAGTCTCGAGTGTGGAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR CAA 90 bp ACTAAAGCGGTTTTAGAGAAATTGCAGGCAGCAACCCCACCCACTCCCTTTACCTCCAGAAGACCATCCTaGATTGGGCTGGCGTCCACC +
Preference number: 5 (lower is better)
Translates to: TKAVLEKLQAATPPTPFTSRRPS*IGLAST
Trigger: GGTGGACGCCAGCCCAATCAAGGATGGTCTTCTGGA...GGTAAAGGGAGTGGGTGGGGTTGCTGCCTGCAATTTCTCTAAAACCGCTTTAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp GCAGCTGCCAGAATACTCACGGGTGCATCTTCATGCATGTTTGTCTACGTGGGTCCTCCCACCCACCTTTaGAAGCTAGGCTTGCATTGC +
Preference number: 5 (lower is better)
Translates to: AAARILTGASSCMFVYVGPPTHL*KLGLHC
Trigger: GCAATGCAAGCCTAGCTTCAAAAGGTGGGTGGGAGG...ACCCACGTAGACAAACATGCATGAAGATGCACCCGTGAGTATTCTGGCAGCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR CAA 90 bp GGATTTTTGCTGTACCTTCCTGTTACCTGTTTGTGTGCAAAGTTGGAAAGCTGCACCAGAAGCCTCTGGTaGTGGTGGCGGCGGCTGCTG +
Preference number: 5 (lower is better)
Translates to: GFLLYLPVTCLCAKLESCTRSLW*WWRRLL
Trigger: CAGCAGCCGCCGCCACCACAACCAGAGGCTTCTGGT...GCAGCTTTCCAACTTTGCACACAAACAGGTAACAGGAAGGTACAGCAAAAATCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp AATTCAGCAGCTGCCAGAATACTCACGGGTGCATCTTCATGCATGTTTGTCTACTTGGGGTGGGCAGGTTaGGTTCTCGAGGTGCTGGGC +
Preference number: 5 (lower is better)
Translates to: NSAAARILTGASSCMFVYLGWAG*VLEVLG
Trigger: GCCCAGCACCTCGAGAACCAAACCTGCCCACCCCAA...GTAGACAAACATGCATGAAGATGCACCCGTGAGTATTCTGGCAGCTGCTGAATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS TCA 90 bp CCAGAGCTGAAGCCAGAACCATATCCAGGTATTGGCCCTTTGGTTTaGAGGTCTGGGAGCCCCACATTCAATGCGTTGGGTACCATGTTG +
Preference number: 5 (lower is better)
Translates to: PELKPEPYPGIGPLV*RSGSPTFNALGTML
Trigger: CAACATGGTACCCAACGCATTGAATGTGGGGCTCCCAGACCTTCAAACCAAAGGGCCAATACCTGGATATGGTTCTGGCTTCAGCTCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000402203.5
ENST00000446273.1
ENST00000454349.7
CDS GCA 90 bp ACCGACGGCCAGAGTTATGACTGTCACTACTTCCTGCTTTGTGGTTaGTTCCAGTGCTTTGACCTCCAACTTCACTTCCTGTGGAGCTGG +
Preference number: 5 (lower is better)
Translates to: TDGQSYDCHYFLLCG*FQCFDLQLHFLWSW
Trigger: CCAGCTCCACAGGAAGTGAAGTTGGAGGTCAAAGCACTGGAAGCAACCACAAAGCAGGAAGTAGTGACAGTCATAACTCTGGCCGTCGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335727.13
ENST00000446273.1
ENST00000454349.7
CDS GCA 90 bp TGCCGATTTACTGGTCATTGGGGTGGGCAGGTTTGGTTCTCGAGGTaGTGGGCCCCCTTGGGAATTCTTATCCCACAGATTCACATTCTT +
Preference number: 5 (lower is better)
Translates to: CRFTGHWGGQVWFSR*WAPLGILIPQIHIL
Trigger: AAGAATGTGAATCTGTGGGATAAGAATTCCCAAGGGGGCCCAGCACCTCGAGAACCAAACCTGCCCACCCCAATGACCAGTAAATCGGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335727.13
ENST00000446273.1
ENST00000454349.7
CDS CCA 90 bp TTCGGCTCAAAAGAGTCTGCAAGACAGCCTGACAATCAGGATGTGTaGGCCTGTACGACCGACGGCCAGAGTTATGACTGTCACTACTTC +
Preference number: 5 (lower is better)
Translates to: FGSKESARQPDNQDV*ACTTDGQSYDCHYF
Trigger: GAAGTAGTGACAGTCATAACTCTGGCCGTCGGTCGTACAGGCCCACACATCCTGATTGTCAGGCTGTCTTGCAGACTCTTTTGAGCCGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335727.13
ENST00000446273.1
ENST00000454349.7
CDS CCA 90 bp GCTCTCCCACCCCTCAGTTCCTTTGTCAGATTTCCCCTCAGGCCTTaGCACCTCTTCAATGTCCCACACTGTGTCCTGCTTAATTTGAGT +
Preference number: 5 (lower is better)
Translates to: ALPPLSSFVRFPLRP*HLFNVPHCVLLNLS
Trigger: ACTCAAATTAAGCAGGACACAGTGTGGGACATTGAAGAGGTGCCAAGGCCTGAGGGGAAATCTGACAAAGGAACTGAGGGGTGGGAGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335727.13
ENST00000446273.1
ENST00000454349.7
CDS-3UTR CAA 90 bp AACTTTTACAGCCACCCCTCTGGGAGTTGTACACACCTTTCAGTAGCCGAAGGGACCCTTTTGGCATTGTaGCCACCATTGACTGGTGGC +
Preference number: 5 (lower is better)
Translates to: NFYSHPSGSCTHLSVAEGTLLAL*PPLTGG
Trigger: GCCACCAGTCAATGGTGGCAACAATGCCAAAAGGGT...CCCTTCGGCTACTGAAAGGTGTGTACAACTCCCAGAGGGGTGGCTGTAAAAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp TTAAGGGTTTACATTGCAGGGGGAAATGTACCTCGAGGTATTATTTTGTGTGAGTGTAGCGGGCGGCGCTaGGCGGTTGTCCGTTCGGCA +
Preference number: 5 (lower is better)
Translates to: LRVYIAGGNVPRGIILCECSGRR*AVVRSA
Trigger: TGCCGAACGGACAACCGCCAAGCGCCGCCCGCTACA...CTCACACAAAATAATACCTCGAGGTACATTTCCCCCTGCAATGTAAACCCTTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp AATGAAGCTGAAGGAATCGAGTGGGAGGGACTGTTCTCCTCTTTGGGGGAGCTCCGTTTTAGTAACACTTaGTGGTCCTGCTGGCAACGG +
Preference number: 5 (lower is better)
Translates to: NEAEGIEWEGLFSSLGELRFSNT*WSCWQR
Trigger: CCGTTGCCAGCAGGACCACAAAGTGTTACTAAAACG...GAGCTCCCCCAAAGAGGAGAACAGTCCCTCCCACTCGATTCCTTCAGCTTCATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp AACTTTTACAGCCACCCCTCTGGGAGTTGTACACACCTTTCAGTAGCCGAAGGGTCACTTGTGCGTTGTTaGGGTTTGCTCCAGGTGCTG +
Preference number: 5 (lower is better)
Translates to: NFYSHPSGSCTHLSVAEGSLVRC*GLLQVL
Trigger: CAGCACCTGGAGCAAACCCAAACAACGCACAAGTGA...CCCTTCGGCTACTGAAAGGTGTGTACAACTCCCAGAGGGGTGGCTGTAAAAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp GGGTTTATCTTAAAGATGGGGGCGAAGGGGGTGTCTGCAAAGAAGCAATTCAAAGCAGGTGGTGTGCTTTaGCTCCAGACTGGCGCAGTC +
Preference number: 5 (lower is better)
Translates to: GFILKMGAKGVSAKKQFKAGGVL*LQTGAV
Trigger: GACTGCGCCAGTCTGGAGCAAAAGCACACCACCTGC...TTTGAATTGCTTCTTTGCAGACACCCCCTTCGCCCCCATCTTTAAGATAAACCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000301923.13
CDS-3UTR CAA 90 bp TCCCTAATGACTAAAGCTGACCGTCTGTTTGTTTGTATCCAACGGATAGCTTCTATGGCATTGGGAGCGTaGGCGGGCGTGTTCCCCCAG +
Preference number: 5 (lower is better)
Translates to: SLMTKADRLFVCIQRIASMALGA*AGVFPQ
Trigger: CTGGGGGAACACGCCCGCCAACGCTCCCAATGCCAT...AGAAGCTATCCGTTGGATACAAACAAACAGACGGTCAGCTTTAGTCATTAGGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301923.13
ENST00000454349.7
CDS-3UTR CAA 90 bp GGGTTTATCTTAAAGATGGGGGCGAAGGGGGTGTCTGCAAAGAAGCAATTCAAATTAGGCTTCATGGCATaGGGAGCGTTGGCGGGCGTG +
Preference number: 5 (lower is better)
Translates to: GFILKMGAKGVSAKKQFKLGFMA*GALAGV
Trigger: CACGCCCGCCAACGCTCCCAATGCCATGAAGCCTAA...TTTGAATTGCTTCTTTGCAGACACCCCCTTCGCCCCCATCTTTAAGATAAACCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000301923.13
ENST00000454349.7
CDS-3UTR CAA 90 bp CCCGGCACCTCCACACTCTCCACACTCGAGACTTGCAGATGCACGTGTGACGGTTTCATCCATGAATCATaGTTTCCTCCTTTGAGTGAG +
Preference number: 5 (lower is better)
Translates to: PGTSTLSTLETCRCTCDGFIHES*FPPLSE
Trigger: CTCACTCAAAGGAGGAAACAATGATTCATGGATGAA...ACCGTCACACGTGCATCTGCAAGTCTCGAGTGTGGAGAGTGTGGAGGTGCCGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR CAA 90 bp GTATGCCACAATCACTCGGGATCTGGTCCCGGTGGCCACACGCATGCGGGCAGTACAGACAAATCCATTTaGCTGCTTGGATTATCTTCA +
Preference number: 5 (lower is better)
Translates to: VCHNHSGSGPGGHTHAGSTDKSI*LLGLSS
Trigger: TGAAGATAATCCAAGCAGCAAAATGGATTTGTCTGT...ACTGCCCGCATGCGTGTGGCCACCGGGACCAGATCCCGAGTGATTGTGGCATAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp CCCCTGTCTCCTCTCCCAAGTCCCAGAATCTCTTCCACTCAACTCTACACTGTGGTGGTTCCCATGTCTTaGGAATTAGGTGGACGGAAC +
Preference number: 5 (lower is better)
Translates to: PLSPLPSPRISSTQLYTVVVPMS*ELGGRN
Trigger: GTTCCGTCCACCTAATTCCAAAGACATGGGAACCAC...CACAGTGTAGAGTTGAGTGGAAGAGATTCTGGGACTTGGGAGAGGAGACAGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp AATGAAGCTGAAGGAATCGAGTGGGAGGGACTGTTCTCCTCTTTGGGGGAGCTCGTGCAGACCTCTCGATaGTGCTGTGCTGTTTCCAAA +
Preference number: 5 (lower is better)
Translates to: NEAEGIEWEGLFSSLGELVQTSR*CCAVSK
Trigger: TTTGGAAACAGCACAGCACAATCGAGAGGTCTGCAC...GAGCTCCCCCAAAGAGGAGAACAGTCCCTCCCACTCGATTCCTTCAGCTTCATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp GGATTTTTGCTGTACCTTCCTGTTACCTGTTTGTGTGCAAAGTTGGAAAGCTGCAAACTGGGGAGGCACTaGCGCCCGGAGACTGGGAGA +
Preference number: 5 (lower is better)
Translates to: GFLLYLPVTCLCAKLESCKLGRH*RPETGR
Trigger: TCTCCCAGTCTCCGGGCGCAAGTGCCTCCCCAGTTT...GCAGCTTTCCAACTTTGCACACAAACAGGTAACAGGAAGGTACAGCAAAAATCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp CCCCTGTCTCCTCTCCCAAGTCCCAGAATCTCTTCCACTCAACTCTACACTGTGCTGAAACTGGGGAATTaGTGGAAGCTGGCTCAGCAT +
Preference number: 5 (lower is better)
Translates to: PLSPLPSPRISSTQLYTVLKLGN*WKLAQH
Trigger: ATGCTGAGCCAGCTTCCACAAATTCCCCAGTTTCAG...CACAGTGTAGAGTTGAGTGGAAGAGATTCTGGGACTTGGGAGAGGAGACAGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp TCTGAACCAAGAAAGGTTGAGAGCTCCAGGTATTGTGTGGAGAACATTCTGGAGGCGTTGGGTACCATGTaGTCCAGATGCGGCTTGGGC +
Preference number: 5 (lower is better)
Translates to: SEPRKVESSRYCVENILEALGTM*SRCGLG
Trigger: GCCCAAGCCGCATCTGGACAACATGGTACCCAACGC...CTCCAGAATGTTCTCCACACAATACCTGGAGCTCTCAACCTTTCTTGGTTCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp AATGAAGCTGAAGGAATCGAGTGGGAGGGACTGTTCTCCTCTTTGGGGGAGCTCCCCACATTCAATGCGTaGGGTACCATGTTGTCCAGA +
Preference number: 5 (lower is better)
Translates to: NEAEGIEWEGLFSSLGELPTFNA*GTMLSR
Trigger: TCTGGACAACATGGTACCCAACGCATTGAATGTGGG...GAGCTCCCCCAAAGAGGAGAACAGTCCCTCCCACTCGATTCCTTCAGCTTCATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp CCCCTGTCTCCTCTCCCAAGTCCCAGAATCTCTTCCACTCAACTCTACACTGTGCCCACATTCAATGCGTaGGGTACCATGTTGTCCAGA +
Preference number: 5 (lower is better)
Translates to: PLSPLPSPRISSTQLYTVPTFNA*GTMLSR
Trigger: TCTGGACAACATGGTACCCAACGCATTGAATGTGGG...CACAGTGTAGAGTTGAGTGGAAGAGATTCTGGGACTTGGGAGAGGAGACAGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp AACTGCAGGCCCCCTGGAATTTACCTGGCCATCAGACCTGCCAGCAACAGTGGCACTATAGCGCCATTTTaGTGCATATTGGCTTCCTGT +
Preference number: 5 (lower is better)
Translates to: NCRPPGIYLAIRPASNSGTIAPF*CILASC
Trigger: ACAGGAAGCCAATATGCACAAAAATGGCGCTATAGT...GCCACTGTTGCTGGCAGGTCTGATGGCCAGGTAAATTCCAGGGGGCCTGCAGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp CCCGGCACCTCCACACTCTCCACACTCGAGACTTGCAGATGCACGTGTGACGGTTACTTCCGATTTTATTaGTTGGTGGAGATTTGGCAG +
Preference number: 5 (lower is better)
Translates to: PGTSTLSTLETCRCTCDGYFRFY*LVEIWQ
Trigger: CTGCCAAATCTCCACCAACAAATAAAATCGGAAGTA...ACCGTCACACGTGCATCTGCAAGTCTCGAGTGTGGAGAGTGTGGAGGTGCCGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR CAA 90 bp CAAAGGGTAAAAGCGTGCTGCCCGCTCTGCACACGGCAGAAGCTGGAAAATGCCGATCTGGGGACCATGTaGATTTGTAATCAGGGAACT +
Preference number: 5 (lower is better)
Translates to: QRVKACCPLCTRQKLENADLGTM*ICNQGT
Trigger: AGTTCCCTGATTACAAATCAACATGGTCCCCAGATC...GGCATTTTCCAGCTTCTGCCGTGTGCAGAGCGGGCAGCACGCTTTTACCCTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp TCTGAACCAAGAAAGGTTGAGAGCTCCAGGTATTGTGTGGAGAACATTCTGGAGAGTGCAGTTTGGGCCTaGGCCGCCTCCTGTTTGGTG +
Preference number: 5 (lower is better)
Translates to: SEPRKVESSRYCVENILESAVWA*AASCLV
Trigger: CACCAAACAGGAGGCGGCCAAGGCCCAAACTGCACT...CTCCAGAATGTTCTCCACACAATACCTGGAGCTCTCAACCTTTCTTGGTTCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp GGGTTTATCTTAAAGATGGGGGCGAAGGGGGTGTCTGCAAAGAAGCAATTCAAACCGCACGACAGCACTTaGCTCCACACAGAGAGCGGT +
Preference number: 5 (lower is better)
Translates to: GFILKMGAKGVSAKKQFKPHDST*LHTESG
Trigger: ACCGCTCTCTGTGTGGAGCAAAGTGCTGTCGTGCGG...TTTGAATTGCTTCTTTGCAGACACCCCCTTCGCCCCCATCTTTAAGATAAACCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp ATGCGGGCAGTGTGGGTGCTGAGCTGCTGGAGGAGTAGCTCTCCACTCCCTGACAAGACTGACAATTCATaGTATACACACAGACCAGAA +
Preference number: 5 (lower is better)
Translates to: MRAVWVLSCWRSSSPLPDKTDNS*YTHRPE
Trigger: TTCTGGTCTGTGTGTATACAATGAATTGTCAGTCTT...GTCAGGGAGTGGAGAGCTACTCCTCCAGCAGCTCAGCACCCACACTGCCCGCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp AATGAAGCTGAAGGAATCGAGTGGGAGGGACTGTTCTCCTCTTTGGGGGAGCTCAAAATACACACACCTTaGGCGCTGGCCACAAACCCA +
Preference number: 5 (lower is better)
Translates to: NEAEGIEWEGLFSSLGELKIHTP*ALATNP
Trigger: TGGGTTTGTGGCCAGCGCCAAAGGTGTGTGTATTTT...GAGCTCCCCCAAAGAGGAGAACAGTCCCTCCCACTCGATTCCTTCAGCTTCATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp ACTAAAGCGGTTTTAGAGAAATTGCAGGCAGCAACCCCACCCACTCCCTTTACCCCACCCCTCTGGGAGTaGTACACACCTTTCAGTAGC +
Preference number: 5 (lower is better)
Translates to: TKAVLEKLQAATPPTPFTPPLWE*YTPFSS
Trigger: GCTACTGAAAGGTGTGTACAACTCCCAGAGGGGTGG...GGTAAAGGGAGTGGGTGGGGTTGCTGCCTGCAATTTCTCTAAAACCGCTTTAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp CACACACATGTGCGTCCCCCTTGCTCAGGATGTCTGGGTGTATGTACGAAGGCACCACCTTTCCCATTTTaGGCGAACACACATAGGATG +
Preference number: 5 (lower is better)
Translates to: HTHVRPPCSGCLGVCTKAPPFPF*ANTHRM
Trigger: CATCCTATGTGTGTTCGCCAAAAATGGGAAAGGTGG...TGCCTTCGTACATACACCCAGACATCCTGAGCAAGGGGGACGCACATGTGTGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp CAAAGGGTAAAAGCGTGCTGCCCGCTCTGCACACGGCAGAAGCTGGAAAATGCCGAAGAGAAAACTTTTTaGCCTGACAAGCAACAGCCC +
Preference number: 5 (lower is better)
Translates to: QRVKACCPLCTRQKLENAEEKTF*PDKQQP
Trigger: GGGCTGTTGCTTGTCAGGCAAAAAAGTTTTCTCTTC...GGCATTTTCCAGCTTCTGCCGTGTGCAGAGCGGGCAGCACGCTTTTACCCTTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp CACACACATGTGCGTCCCCCTTGCTCAGGATGTCTGGGTGTATGTACGAAGGCACTGAACCAAGAAAGGTaGAGAGCTCCAGGTATTGTG +
Preference number: 5 (lower is better)
Translates to: HTHVRPPCSGCLGVCTKALNQER*RAPGIV
Trigger: CACAATACCTGGAGCTCTCAACCTTTCTTGGTTCAG...TGCCTTCGTACATACACCCAGACATCCTGAGCAAGGGGGACGCACATGTGTGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp AACTGCAGGCCCCCTGGAATTTACCTGGCCATCAGACCTGCCAGCAACAGTGGCTGGAATTTGCATAATTaGAAGCAGCAGCACCTCCAA +
Preference number: 5 (lower is better)
Translates to: NCRPPGIYLAIRPASNSGWNLHN*KQQHLQ
Trigger: TTGGAGGTGCTGCTGCTTCAAATTATGCAAATTCCA...GCCACTGTTGCTGGCAGGTCTGATGGCCAGGTAAATTCCAGGGGGCCTGCAGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp ACTAAAGCGGTTTTAGAGAAATTGCAGGCAGCAACCCCACCCACTCCCTTTACCATTCGTTCCCAGAACTaGCAGACTGGCACTGGCTCC +
Preference number: 5 (lower is better)
Translates to: TKAVLEKLQAATPPTPFTIRSQN*QTGTGS
Trigger: GGAGCCAGTGCCAGTCTGCAAGTTCTGGGAACGAAT...GGTAAAGGGAGTGGGTGGGGTTGCTGCCTGCAATTTCTCTAAAACCGCTTTAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp CAAAGGGTAAAAGCGTGCTGCCCGCTCTGCACACGGCAGAAGCTGGAAAATGCCCCCGTAGACCTGTTATaGTTGTCCCAAGAGTCATTT +
Preference number: 5 (lower is better)
Translates to: QRVKACCPLCTRQKLENAPVDLL*LSQESF
Trigger: AAATGACTCTTGGGACAACAATAACAGGTCTACGGG...GGCATTTTCCAGCTTCTGCCGTGTGCAGAGCGGGCAGCACGCTTTTACCCTTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp AACTTTTACAGCCACCCCTCTGGGAGTTGTACACACCTTTCAGTAGCCGAAGGGCCTTCACCCCATTTGTaGTCATTAGAGTCCTGGGGG +
Preference number: 5 (lower is better)
Translates to: NFYSHPSGSCTHLSVAEGPSPHL*SLESWG
Trigger: CCCCCAGGACTCTAATGACAACAAATGGGGTGAAGG...CCCTTCGGCTACTGAAAGGTGTGTACAACTCCCAGAGGGGTGGCTGTAAAAGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp CAGCTGCCAGAATACTCACGGGTGCATCTTCATGCATGTTTGTCTACGTGGGTGCAGCCTCCTGTGTTCTaGGGGTCTTTCCACTCTGTA +
Preference number: 5 (lower is better)
Translates to: QLPEYSRVHLHACLSTWVQPPVF*GSFHSV
Trigger: TACAGAGTGGAAAGACCCCAAGAACACAGGAGGCTG...CACCCACGTAGACAAACATGCATGAAGATGCACCCGTGAGTATTCTGGCAGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR CAA 90 bp CCCCTGTCTCCTCTCCCAAGTCCCAGAATCTCTTCCACTCAACTCTACACTGTGCTTTTGAAGCTAGGCTaGCATTGCCACCATTACCCC +
Preference number: 5 (lower is better)
Translates to: PLSPLPSPRISSTQLYTVLLKLG*HCHHYP
Trigger: GGGGTAATGGTGGCAATGCAAGCCTAGCTTCAAAAG...CACAGTGTAGAGTTGAGTGGAAGAGATTCTGGGACTTGGGAGAGGAGACAGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp ACTTTCAGGTCAGCACGAGTGAAGCGTGGTTTCCTGAGCTTGAAGGGCTCTGAATGTTTATTCCAGGAATaGGGCTGTCGGCCCGTCTCA +
Preference number: 5 (lower is better)
Translates to: TFRSARVKRGFLSLKGSECLFQE*GCRPVS
Trigger: TGAGACGGGCCGACAGCCCAATTCCTGGAATAAACA...TTCAGAGCCCTTCAAGCTCAGGAAACCACGCTTCACTCGTGCTGACCTGAAAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp GCAGCTGCCAGAATACTCACGGGTGCATCTTCATGCATGTTTGTCTACGTGGGTCCGATTTACTGGTCATaGGGGTGGGCAGGTTTGGTT +
Preference number: 5 (lower is better)
Translates to: AAARILTGASSCMFVYVGPIYWS*GWAGLV
Trigger: AACCAAACCTGCCCACCCCAATGACCAGTAAATCGG...ACCCACGTAGACAAACATGCATGAAGATGCACCCGTGAGTATTCTGGCAGCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS CCA 90 bp CAGACCCCAAGATTACATTCGTTCCCAGAACTTGCAGACTGGCACTaGCTCCCTTTTCCTTTGTTACTAGTGGTGCTTCCTGGCAGAGTG +
Preference number: 5 (lower is better)
Translates to: QTPRLHSFPELADWH*LPFPLLLVVLPGRV
Trigger: CACTCTGCCAGGAAGCACCACTAGTAACAAAGGAAAAGGGAGCCAGTGCCAGTCTGCAAGTTCTGGGAACGAATGTAATCTTGGGGTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS CCA 90 bp CGATTTACTGGTCATTGGGGTGGGCAGGTTTGGTTCTCGAGGTGCTaGGCCCCCTTGGGAATTCTTATCCCACAGATTCACATTCTTGTA +
Preference number: 5 (lower is better)
Translates to: RFTGHWGGQVWFSRC*APLGILIPQIHILV
Trigger: TACAAGAATGTGAATCTGTGGGATAAGAATTCCCAAGGGGGCCCAGCACCTCGAGAACCAAACCTGCCCACCCCAATGACCAGTAAATCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335727.13
ENST00000446273.1
ENST00000454349.7
CDS-3UTR CAA 90 bp AATGAAGCTGAAGGAATCGAGTGGGAGGGACTGTTCTCCTCTTTGGGGGAGCTCTTGGTTGGCTTAAACTaGGTTTCGTCACTTCGGGCA +
Preference number: 5 (lower is better)
Translates to: NEAEGIEWEGLFSSLGELLVGLN*VSSLRA
Trigger: TGCCCGAAGTGACGAAACCAAGTTTAAGCCAACCAA...GAGCTCCCCCAAAGAGGAGAACAGTCCCTCCCACTCGATTCCTTCAGCTTCATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp ACTAAAGCGGTTTTAGAGAAATTGCAGGCAGCAACCCCACCCACTCCCTTTACCACCCTTTTGGCATTGTaGCCACCATTGACTGGTGGC +
Preference number: 5 (lower is better)
Translates to: TKAVLEKLQAATPPTPFTTLLAL*PPLTGG
Trigger: GCCACCAGTCAATGGTGGCAACAATGCCAAAAGGGT...GGTAAAGGGAGTGGGTGGGGTTGCTGCCTGCAATTTCTCTAAAACCGCTTTAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp CTCTCCACACTCGAGACTTGCAGATGCACGTGTGACGGTGCCATTCTTCGTATAGTGGTTCCCATGTCTTaGGAATTAGGTGGACGGAAC +
Preference number: 5 (lower is better)
Translates to: LSTLETCRCTCDGAILRIVVPMS*ELGGRN
Trigger: GTTCCGTCCACCTAATTCCAAAGACATGGGAACCAC...TATACGAAGAATGGCACCGTCACACGTGCATCTGCAAGTCTCGAGTGTGGAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR CAA 90 bp CTCTCCACACTCGAGACTTGCAGATGCACGTGTGACGGTGCCATTCTTCGTATAGTGCAGACCTCTCGATaGTGCTGTGCTGTTTCCAAA +
Preference number: 5 (lower is better)
Translates to: LSTLETCRCTCDGAILRIVQTSR*CCAVSK
Trigger: TTTGGAAACAGCACAGCACAATCGAGAGGTCTGCAC...TATACGAAGAATGGCACCGTCACACGTGCATCTGCAAGTCTCGAGTGTGGAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR CAA 90 bp ACTTTCAGGTCAGCACGAGTGAAGCGTGGTTTCCTGAGCTTGAAGGGCTCTGAACTGAAACTGGGGAATTaGTGGAAGCTGGCTCAGCAT +
Preference number: 5 (lower is better)
Translates to: TFRSARVKRGFLSLKGSELKLGN*WKLAQH
Trigger: ATGCTGAGCCAGCTTCCACAAATTCCCCAGTTTCAG...TTCAGAGCCCTTCAAGCTCAGGAAACCACGCTTCACTCGTGCTGACCTGAAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp TCTGAACCAAGAAAGGTTGAGAGCTCCAGGTATTGTGTGGAGAACATTCTGGAGAGCCAGCTGCTGCTCTaGCTGTTGGCGTACAGCTTG +
Preference number: 5 (lower is better)
Translates to: SEPRKVESSRYCVENILESQLLL*LLAYSL
Trigger: CAAGCTGTACGCCAACAGCAAGAGCAGCAGCTGGCT...CTCCAGAATGTTCTCCACACAATACCTGGAGCTCTCAACCTTTCTTGGTTCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp ACTTTCAGGTCAGCACGAGTGAAGCGTGGTTTCCTGAGCTTGAAGGGCTCTGAACCCACATTCAATGCGTaGGGTACCATGTTGTCCAGA +
Preference number: 5 (lower is better)
Translates to: TFRSARVKRGFLSLKGSEPTFNA*GTMLSR
Trigger: TCTGGACAACATGGTACCCAACGCATTGAATGTGGG...TTCAGAGCCCTTCAAGCTCAGGAAACCACGCTTCACTCGTGCTGACCTGAAAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp GCAGCTGCCAGAATACTCACGGGTGCATCTTCATGCATGTTTGTCTACGTGGGTCCCACATTCAATGCGTaGGGTACCATGTTGTCCAGA +
Preference number: 5 (lower is better)
Translates to: AAARILTGASSCMFVYVGPTFNA*GTMLSR
Trigger: TCTGGACAACATGGTACCCAACGCATTGAATGTGGG...ACCCACGTAGACAAACATGCATGAAGATGCACCCGTGAGTATTCTGGCAGCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR CAA 90 bp AACTGCAGGCCCCCTGGAATTTACCTGGCCATCAGACCTGCCAGCAACAGTGGCTACTTCCGATTTTATTaGTTGGTGGAGATTTGGCAG +
Preference number: 5 (lower is better)
Translates to: NCRPPGIYLAIRPASNSGYFRFY*LVEIWQ
Trigger: CTGCCAAATCTCCACCAACAAATAAAATCGGAAGTA...GCCACTGTTGCTGGCAGGTCTGATGGCCAGGTAAATTCCAGGGGGCCTGCAGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp GGGTTTATCTTAAAGATGGGGGCGAAGGGGGTGTCTGCAAAGAAGCAATTCAAAGATGATGGTTTGGGGTaGGTCAGACCAGGAGGTGGG +
Preference number: 5 (lower is better)
Translates to: GFILKMGAKGVSAKKQFKDDGLG*VRPGGG
Trigger: CCCACCTCCTGGTCTGACCAACCCCAAACCATCATC...TTTGAATTGCTTCTTTGCAGACACCCCCTTCGCCCCCATCTTTAAGATAAACCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp CAGCTGCCAGAATACTCACGGGTGCATCTTCATGCATGTTTGTCTACGTGGGTGAGATCGTTCTCAAGGTaGACCCATCAATCTGTGGGG +
Preference number: 5 (lower is better)
Translates to: QLPEYSRVHLHACLSTWVRSFSR*THQSVG
Trigger: CCCCACAGATTGATGGGTCAACCTTGAGAACGATCT...CACCCACGTAGACAAACATGCATGAAGATGCACCCGTGAGTATTCTGGCAGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR CAA 90 bp TCTGAACCAAGAAAGGTTGAGAGCTCCAGGTATTGTGTGGAGAACATTCTGGAGTTGGCCGCCTCCTGTTaGGTGCTGTATCGGATCAGG +
Preference number: 5 (lower is better)
Translates to: SEPRKVESSRYCVENILELAASC*VLYRIR
Trigger: CCTGATCCGATACAGCACCAAACAGGAGGCGGCCAA...CTCCAGAATGTTCTCCACACAATACCTGGAGCTCTCAACCTTTCTTGGTTCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp CCCCTGTCTCCTCTCCCAAGTCCCAGAATCTCTTCCACTCAACTCTACACTGTGAGTTCTAAGTTCAGATaGAATCCGACCCTCCTCCCA +
Preference number: 5 (lower is better)
Translates to: PLSPLPSPRISSTQLYTVSSKFR*NPTLLP
Trigger: TGGGAGGAGGGTCGGATTCAATCTGAACTTAGAACT...CACAGTGTAGAGTTGAGTGGAAGAGATTCTGGGACTTGGGAGAGGAGACAGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp CAAAGGGTAAAAGCGTGCTGCCCGCTCTGCACACGGCAGAAGCTGGAAAATGCCGAAAGAAAAACTCCCTaGTCCTCAATAGCAGCAAGT +
Preference number: 5 (lower is better)
Translates to: QRVKACCPLCTRQKLENAERKTP*SSIAAS
Trigger: ACTTGCTGCTATTGAGGACAAGGGAGTTTTTCTTTC...GGCATTTTCCAGCTTCTGCCGTGTGCAGAGCGGGCAGCACGCTTTTACCCTTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp CACACACATGTGCGTCCCCCTTGCTCAGGATGTCTGGGTGTATGTACGAAGGCAAGGAACCCCTTCTATTaGCCCAAGACAAAGAGACTT +
Preference number: 5 (lower is better)
Translates to: HTHVRPPCSGCLGVCTKARNPFY*PKTKRL
Trigger: AAGTCTCTTTGTCTTGGGCAAATAGAAGGGGTTCCT...TGCCTTCGTACATACACCCAGACATCCTGAGCAAGGGGGACGCACATGTGTGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp CACACACATGTGCGTCCCCCTTGCTCAGGATGTCTGGGTGTATGTACGAAGGCAAGTGCTTCTTTTCTTTaGGCTACTCGTGTGGTAGGT +
Preference number: 5 (lower is better)
Translates to: HTHVRPPCSGCLGVCTKASASFL*ATRVVG
Trigger: ACCTACCACACGAGTAGCCAAAAGAAAAGAAGCACT...TGCCTTCGTACATACACCCAGACATCCTGAGCAAGGGGGACGCACATGTGTGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp AATGAAGCTGAAGGAATCGAGTGGGAGGGACTGTTCTCCTCTTTGGGGGAGCTCTCAACCCACAGGAGTTaGGAAGAACCGATTGCTAAC +
Preference number: 5 (lower is better)
Translates to: NEAEGIEWEGLFSSLGELSTHRS*EEPIAN
Trigger: GTTAGCAATCGGTTCTTCCAAACTCCTGTGGGTTGA...GAGCTCCCCCAAAGAGGAGAACAGTCCCTCCCACTCGATTCCTTCAGCTTCATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp CACACACATGTGCGTCCCCCTTGCTCAGGATGTCTGGGTGTATGTACGAAGGCACTTGGCGTAAGCATTTaGCTCAGCATGCAGACATTT +
Preference number: 5 (lower is better)
Translates to: HTHVRPPCSGCLGVCTKALGVSI*LSMQTF
Trigger: AAATGTCTGCATGCTGAGCAAAATGCTTACGCCAAG...TGCCTTCGTACATACACCCAGACATCCTGAGCAAGGGGGACGCACATGTGTGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp CACACACATGTGCGTCCCCCTTGCTCAGGATGTCTGGGTGTATGTACGAAGGCAGTATCTGTGTGTTTCTaGACTGTATGGACTCCCTGT +
Preference number: 5 (lower is better)
Translates to: HTHVRPPCSGCLGVCTKAVSVCF*TVWTPC
Trigger: ACAGGGAGTCCATACAGTCAAGAAACACACAGATAC...TGCCTTCGTACATACACCCAGACATCCTGAGCAAGGGGGACGCACATGTGTGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp CAAAGGGTAAAAGCGTGCTGCCCGCTCTGCACACGGCAGAAGCTGGAAAATGCCAACCATCCCAACTTGTaGATATTGGCTAGATATGGG +
Preference number: 5 (lower is better)
Translates to: QRVKACCPLCTRQKLENANHPNL*ILARYG
Trigger: CCCATATCTAGCCAATATCAACAAGTTGGGATGGTT...GGCATTTTCCAGCTTCTGCCGTGTGCAGAGCGGGCAGCACGCTTTTACCCTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp CAAAGGGTAAAAGCGTGCTGCCCGCTCTGCACACGGCAGAAGCTGGAAAATGCCTGTGTAATACCCTGTTaGCATCAACAGCAACGTGAT +
Preference number: 5 (lower is better)
Translates to: QRVKACCPLCTRQKLENACVIPC*HQQQRD
Trigger: ATCACGTTGCTGTTGATGCAAACAGGGTATTACACA...GGCATTTTCCAGCTTCTGCCGTGTGCAGAGCGGGCAGCACGCTTTTACCCTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp CAAAGGGTAAAAGCGTGCTGCCCGCTCTGCACACGGCAGAAGCTGGAAAATGCCCCACATGAGCAGCATTaGTTAAAAGCATTTCCCTCT +
Preference number: 5 (lower is better)
Translates to: QRVKACCPLCTRQKLENAPHEQH*LKAFPS
Trigger: AGAGGGAAATGCTTTTAACAAATGCTGCTCATGTGG...GGCATTTTCCAGCTTCTGCCGTGTGCAGAGCGGGCAGCACGCTTTTACCCTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp CCCCTGTCTCCTCTCCCAAGTCCCAGAATCTCTTCCACTCAACTCTACACTGTGGATCAGCAAAGCCCTTaGGGAGCATTGTACAAGAGA +
Preference number: 5 (lower is better)
Translates to: PLSPLPSPRISSTQLYTVDQQSP*GALYKR
Trigger: TCTCTTGTACAATGCTCCCAAAGGGCTTTGCTGATC...CACAGTGTAGAGTTGAGTGGAAGAGATTCTGGGACTTGGGAGAGGAGACAGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp CACACACATGTGCGTCCCCCTTGCTCAGGATGTCTGGGTGTATGTACGAAGGCAAGCCCCAAGTGGAATTaGCATAATTTGAAGCAGCAG +
Preference number: 5 (lower is better)
Translates to: HTHVRPPCSGCLGVCTKASPKWN*HNLKQQ
Trigger: CTGCTGCTTCAAATTATGCAAATTCCACTTGGGGCT...TGCCTTCGTACATACACCCAGACATCCTGAGCAAGGGGGACGCACATGTGTGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp AATGAAGCTGAAGGAATCGAGTGGGAGGGACTGTTCTCCTCTTTGGGGGAGCTCCTATTTGGGTTAAAGTaGCTGAAGCCAGAGCCAGGT +
Preference number: 5 (lower is better)
Translates to: NEAEGIEWEGLFSSLGELLFGLK*LKPEPG
Trigger: ACCTGGCTCTGGCTTCAGCAACTTTAACCCAAATAG...GAGCTCCCCCAAAGAGGAGAACAGTCCCTCCCACTCGATTCCTTCAGCTTCATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp GCACCTCCACACTCTCCACACTCGAGACTTGCAGATGCACGTGTGACGGTGCCACCCAAGAGTCATTTTTaGACCCAGTTGATTTCTGAA +
Preference number: 5 (lower is better)
Translates to: APPHSPHSRLADARVTVPPKSHF*TQLISE
Trigger: TTCAGAAATCAACTGGGTCAAAAAATGACTCTTGGG...TGGCACCGTCACACGTGCATCTGCAAGTCTCGAGTGTGGAGAGTGTGGAGGTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR CAA 90 bp GGATTTTTGCTGTACCTTCCTGTTACCTGTTTGTGTGCAAAGTTGGAAAGCTGCAGCCTGGGCATTGCCTaGGTTTTCAGGGAGGGGGTG +
Preference number: 5 (lower is better)
Translates to: GFLLYLPVTCLCAKLESCSLGIA*VFREGV
Trigger: CACCCCCTCCCTGAAAACCAAGGCAATGCCCAGGCT...GCAGCTTTCCAACTTTGCACACAAACAGGTAACAGGAAGGTACAGCAAAAATCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp CCCCTGTCTCCTCTCCCAAGTCCCAGAATCTCTTCCACTCAACTCTACACTGTGTCACTACTTCCTGCTTaGTGGTTGCTTCCAGTGCTT +
Preference number: 5 (lower is better)
Translates to: PLSPLPSPRISSTQLYTVSLLPA*WLLPVL
Trigger: AAGCACTGGAAGCAACCACAAAGCAGGAAGTAGTGA...CACAGTGTAGAGTTGAGTGGAAGAGATTCTGGGACTTGGGAGAGGAGACAGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp CTCTCCACACTCGAGACTTGCAGATGCACGTGTGACGGTGCCATTCTTCGTATATGTGTCCTGCTTAATTaGAGTTTGGCCCCAGCCAGT +
Preference number: 5 (lower is better)
Translates to: LSTLETCRCTCDGAILRICVLLN*SLAPAS
Trigger: ACTGGCTGGGGCCAAACTCAAATTAAGCAGGACACA...TATACGAAGAATGGCACCGTCACACGTGCATCTGCAAGTCTCGAGTGTGGAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR CAA 90 bp TCTGAACCAAGAAAGGTTGAGAGCTCCAGGTATTGTGTGGAGAACATTCTGGAGGCTCCAAGGCTGACGTaGGGTAGTGTGGAACCAGAG +
Preference number: 5 (lower is better)
Translates to: SEPRKVESSRYCVENILEAPRLT*GSVEPE
Trigger: CTCTGGTTCCACACTACCCAACGTCAGCCTTGGAGC...CTCCAGAATGTTCTCCACACAATACCTGGAGCTCTCAACCTTTCTTGGTTCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454349.7
CDS-3UTR CAA 90 bp AACTTTTACAGCCACCCCTCTGGGAGTTGTACACACCTTTCAGTAGCCGAAGGGACCATGACTACCGCCTaGTCTAGCAGCGAAGTTTTG +
Preference number: 5 (lower is better)
Translates to: NFYSHPSGSCTHLSVAEGTMTTA*SSSEVL
Trigger: CAAAACTTCGCTGCTAGACAAGGCGGTAGTCATGGT...CCCTTCGGCTACTGAAAGGTGTGTACAACTCCCAGAGGGGTGGCTGTAAAAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000454349.7
CDS CCA 90 bp TGTTTCCAATGCCCCTTTCCTAGAAGTTCCTTCTTGGACCAGTGCTaGCCAGGCAGATGGGTTGCTATTTGGGTTAAAGTTGCTGAAGCC +
Preference number: 5 (lower is better)
Translates to: CFQCPFPRSSFLDQC*PGRWVAIWVKVAEA
Trigger: GGCTTCAGCAACTTTAACCCAAATAGCAACCCATCTGCCTGGCCAGCACTGGTCCAAGAAGGAACTTCTAGGAAAGGGGCATTGGAAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335727.13
ENST00000446273.1
ENST00000454349.7
CDS-3UTR CAA 90 bp AATGAAGCTGAAGGAATCGAGTGGGAGGGACTGTTCTCCTCTTTGGGGGAGCTCACAAAAATACTGCCTTaGACAGTACCTGGGGCAACA +
Preference number: 5 (lower is better)
Translates to: NEAEGIEWEGLFSSLGELTKILP*TVPGAT
Trigger: TGTTGCCCCAGGTACTGTCAAAGGCAGTATTTTTGT...GAGCTCCCCCAAAGAGGAGAACAGTCCCTCCCACTCGATTCCTTCAGCTTCATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000301923.13
CDS-3UTR CAA 90 bp AATGAAGCTGAAGGAATCGAGTGGGAGGGACTGTTCTCCTCTTTGGGGGAGCTCGATACTTCTCCCTCATaGGTTTGCATGGGAACAGAT +
Preference number: 5 (lower is better)
Translates to: NEAEGIEWEGLFSSLGELDTSPS*VCMGTD
Trigger: ATCTGTTCCCATGCAAACCAATGAGGGAGAAGTATC...GAGCTCCCCCAAAGAGGAGAACAGTCCCTCCCACTCGATTCCTTCAGCTTCATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000301923.13
CDS-3UTR CAA 90 bp ACTAAAGCGGTTTTAGAGAAATTGCAGGCAGCAACCCCACCCACTCCCTTTACCTCCTCCTGTTCCACCTaGGAACTGCTTTCTTCCGAT +
Preference number: 5 (lower is better)
Translates to: TKAVLEKLQAATPPTPFTSSCST*ELLSSD
Trigger: ATCGGAAGAAAGCAGTTCCAAGGTGGAACAGGAGGA...GGTAAAGGGAGTGGGTGGGGTTGCTGCCTGCAATTTCTCTAAAACCGCTTTAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301923.13
CDS-3UTR CAA 90 bp AACTTTTACAGCCACCCCTCTGGGAGTTGTACACACCTTTCAGTAGCCGAAGGGTGCTCCTTCTCTTGTTaGCTTTCTTCACCAGGAGGT +
Preference number: 5 (lower is better)
Translates to: NFYSHPSGSCTHLSVAEGCSFSC*LSSPGG
Trigger: ACCTCCTGGTGAAGAAAGCAAACAAGAGAAGGAGCA...CCCTTCGGCTACTGAAAGGTGTGTACAACTCCCAGAGGGGTGGCTGTAAAAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301923.13
CDS-3UTR CAA 90 bp ACTTTCAGGTCAGCACGAGTGAAGCGTGGTTTCCTGAGCTTGAAGGGCTCTGAAGGGCACTTTGGTTTTTaGTTCCGTGACCTTCTGAGT +
Preference number: 5 (lower is better)
Translates to: TFRSARVKRGFLSLKGSEGHFGF*FRDLLS
Trigger: ACTCAGAAGGTCACGGAACAAAAAACCAAAGTGCCC...TTCAGAGCCCTTCAAGCTCAGGAAACCACGCTTCACTCGTGCTGACCTGAAAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp ACTTTCAGGTCAGCACGAGTGAAGCGTGGTTTCCTGAGCTTGAAGGGCTCTGAATTGGTTGGCTTAAACTaGGTTTCGTCACTTCGGGCA +
Preference number: 5 (lower is better)
Translates to: TFRSARVKRGFLSLKGSELVGLN*VSSLRA
Trigger: TGCCCGAAGTGACGAAACCAAGTTTAAGCCAACCAA...TTCAGAGCCCTTCAAGCTCAGGAAACCACGCTTCACTCGTGCTGACCTGAAAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp TCTGAACCAAGAAAGGTTGAGAGCTCCAGGTATTGTGTGGAGAACATTCTGGAGTTGGGCTGGCGGCCGTaGGTTGGCTTAAACTTGGTT +
Preference number: 5 (lower is better)
Translates to: SEPRKVESSRYCVENILELGWRP*VGLNLV
Trigger: AACCAAGTTTAAGCCAACCAACGGCCGCCAGCCCAA...CTCCAGAATGTTCTCCACACAATACCTGGAGCTCTCAACCTTTCTTGGTTCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp TGTGCACGTGTCTCTGTGAGCACATTCACGGTGCATGCACCATTTTTGATGTCTGCCACCCTTTTGGCATaGTTGCCACCATTGACTGGT +
Preference number: 5 (lower is better)
Translates to: CARVSVSTFTVHAPFLMSATLLA*LPPLTG
Trigger: ACCAGTCAATGGTGGCAACAATGCCAAAAGGGTGGC...AGACATCAAAAATGGTGCATGCACCGTGAATGTGCTCACAGAGACACGTGCACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp GGATTTTTGCTGTACCTTCCTGTTACCTGTTTGTGTGCAAAGTTGGAAAGCTGCGTGCGTTGTTTGGGTTaGCTCCAGGTGCTGTGCAGG +
Preference number: 5 (lower is better)
Translates to: GFLLYLPVTCLCAKLESCVRCLG*LQVLCR
Trigger: CCTGCACAGCACCTGGAGCAAACCCAAACAACGCAC...GCAGCTTTCCAACTTTGCACACAAACAGGTAACAGGAAGGTACAGCAAAAATCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp TGTGCACGTGTCTCTGTGAGCACATTCACGGTGCATGCACCATTTTTGATGTCTTCACTTGTGCGTTGTTaGGGTTTGCTCCAGGTGCTG +
Preference number: 5 (lower is better)
Translates to: CARVSVSTFTVHAPFLMSSLVRC*GLLQVL
Trigger: CAGCACCTGGAGCAAACCCAAACAACGCACAAGTGA...AGACATCAAAAATGGTGCATGCACCGTGAATGTGCTCACAGAGACACGTGCACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp TCTGAACCAAGAAAGGTTGAGAGCTCCAGGTATTGTGTGGAGAACATTCTGGAGCAGCGCTCCTGTCACTaGTGCGTTGTTTGGGTTTGC +
Preference number: 5 (lower is better)
Translates to: SEPRKVESSRYCVENILEQRSCH*CVVWVC
Trigger: GCAAACCCAAACAACGCACAAGTGACAGGAGCGCTG...CTCCAGAATGTTCTCCACACAATACCTGGAGCTCTCAACCTTTCTTGGTTCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp ACTAAAGCGGTTTTAGAGAAATTGCAGGCAGCAACCCCACCCACTCCCTTTACCGTGGTTCCCATGTCTTaGGAATTAGGTGGACGGAAC +
Preference number: 5 (lower is better)
Translates to: TKAVLEKLQAATPPTPFTVVPMS*ELGGRN
Trigger: GTTCCGTCCACCTAATTCCAAAGACATGGGAACCAC...GGTAAAGGGAGTGGGTGGGGTTGCTGCCTGCAATTTCTCTAAAACCGCTTTAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp ACTAAAGCGGTTTTAGAGAAATTGCAGGCAGCAACCCCACCCACTCCCTTTACCGTGCAGACCTCTCGATaGTGCTGTGCTGTTTCCAAA +
Preference number: 5 (lower is better)
Translates to: TKAVLEKLQAATPPTPFTVQTSR*CCAVSK
Trigger: TTTGGAAACAGCACAGCACAATCGAGAGGTCTGCAC...GGTAAAGGGAGTGGGTGGGGTTGCTGCCTGCAATTTCTCTAAAACCGCTTTAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp AATGAAGCTGAAGGAATCGAGTGGGAGGGACTGTTCTCCTCTTTGGGGGAGCTCCCATTTTTGTGCATATaGGCTTCCTGTGTGGCTACA +
Preference number: 5 (lower is better)
Translates to: NEAEGIEWEGLFSSLGELPFLCI*ASCVAT
Trigger: TGTAGCCACACAGGAAGCCAATATGCACAAAAATGG...GAGCTCCCCCAAAGAGGAGAACAGTCCCTCCCACTCGATTCCTTCAGCTTCATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp CAAAGGGTAAAAGCGTGCTGCCCGCTCTGCACACGGCAGAAGCTGGAAAATGCCTACTTCCGATTTTATTaGTTGGTGGAGATTTGGCAG +
Preference number: 5 (lower is better)
Translates to: QRVKACCPLCTRQKLENAYFRFY*LVEIWQ
Trigger: CTGCCAAATCTCCACCAACAAATAAAATCGGAAGTA...GGCATTTTCCAGCTTCTGCCGTGTGCAGAGCGGGCAGCACGCTTTTACCCTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp TCTGAACCAAGAAAGGTTGAGAGCTCCAGGTATTGTGTGGAGAACATTCTGGAGCCATGGCACTCCTGGTaGGAATTCTGGAGGCCAACT +
Preference number: 5 (lower is better)
Translates to: SEPRKVESSRYCVENILEPWHSW*EFWRPT
Trigger: AGTTGGCCTCCAGAATTCCAACCAGGAGTGCCATGG...CTCCAGAATGTTCTCCACACAATACCTGGAGCTCTCAACCTTTCTTGGTTCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp GGGTTTATCTTAAAGATGGGGGCGAAGGGGGTGTCTGCAAAGAAGCAATTCAAACCATGGCACTCCTGGTaGGAATTCTGGAGGCCAACT +
Preference number: 5 (lower is better)
Translates to: GFILKMGAKGVSAKKQFKPWHSW*EFWRPT
Trigger: AGTTGGCCTCCAGAATTCCAACCAGGAGTGCCATGG...TTTGAATTGCTTCTTTGCAGACACCCCCTTCGCCCCCATCTTTAAGATAAACCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp AACTTTTACAGCCACCCCTCTGGGAGTTGTACACACCTTTCAGTAGCCGAAGGGGTTATCCCGCAGCAGTaGGTGGTCAGTATCTACAAT +
Preference number: 5 (lower is better)
Translates to: NFYSHPSGSCTHLSVAEGVIPQQ*VVSIYN
Trigger: ATTGTAGATACTGACCACCAACTGCTGCGGGATAAC...CCCTTCGGCTACTGAAAGGTGTGTACAACTCCCAGAGGGGTGGCTGTAAAAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp TTAAGGGTTTACATTGCAGGGGGAAATGTACCTCGAGGTATTATTTTGTGTGAGCATGTGCAGTGCAGTTaGGGCCTTGGCCGCCTCCTG +
Preference number: 5 (lower is better)
Translates to: LRVYIAGGNVPRGIILCEHVQCS*GLGRLL
Trigger: CAGGAGGCGGCCAAGGCCCAAACTGCACTGCACATG...CTCACACAAAATAATACCTCGAGGTACATTTCCCCCTGCAATGTAAACCCTTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp AACTTTTACAGCCACCCCTCTGGGAGTTGTACACACCTTTCAGTAGCCGAAGGGAGTTCTAAGTTCAGATaGAATCCGACCCTCCTCCCA +
Preference number: 5 (lower is better)
Translates to: NFYSHPSGSCTHLSVAEGSSKFR*NPTLLP
Trigger: TGGGAGGAGGGTCGGATTCAATCTGAACTTAGAACT...CCCTTCGGCTACTGAAAGGTGTGTACAACTCCCAGAGGGGTGGCTGTAAAAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp ACTTTCAGGTCAGCACGAGTGAAGCGTGGTTTCCTGAGCTTGAAGGGCTCTGAAGAAATAAACACACCGTaGCTCCAAGAGGTACCTCCT +
Preference number: 5 (lower is better)
Translates to: TFRSARVKRGFLSLKGSEEINTP*LQEVPP
Trigger: AGGAGGTACCTCTTGGAGCAACGGTGTGTTTATTTC...TTCAGAGCCCTTCAAGCTCAGGAAACCACGCTTCACTCGTGCTGACCTGAAAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp TCCCTAATGACTAAAGCTGACCGTCTGTTTGTTTGTATCCAACGGATAGCTTCTCCGCACGACAGCACTTaGCTCCACACAGAGAGCGGT +
Preference number: 5 (lower is better)
Translates to: SLMTKADRLFVCIQRIASPHDST*LHTESG
Trigger: ACCGCTCTCTGTGTGGAGCAAAGTGCTGTCGTGCGG...AGAAGCTATCCGTTGGATACAAACAAACAGACGGTCAGCTTTAGTCATTAGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp AATGAAGCTGAAGGAATCGAGTGGGAGGGACTGTTCTCCTCTTTGGGGGAGCTCAGTGCTTCTTTTCTTTaGGCTACTCGTGTGGTAGGT +
Preference number: 5 (lower is better)
Translates to: NEAEGIEWEGLFSSLGELSASFL*ATRVVG
Trigger: ACCTACCACACGAGTAGCCAAAAGAAAAGAAGCACT...GAGCTCCCCCAAAGAGGAGAACAGTCCCTCCCACTCGATTCCTTCAGCTTCATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp CACACACATGTGCGTCCCCCTTGCTCAGGATGTCTGGGTGTATGTACGAAGGCACTTGACAACTTTCTTTaGCAGCTTACTGTGAGCAGT +
Preference number: 5 (lower is better)
Translates to: HTHVRPPCSGCLGVCTKALDNFL*QLTVSS
Trigger: ACTGCTCACAGTAAGCTGCAAAAGAAAGTTGTCAAG...TGCCTTCGTACATACACCCAGACATCCTGAGCAAGGGGGACGCACATGTGTGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp ACTAAAGCGGTTTTAGAGAAATTGCAGGCAGCAACCCCACCCACTCCCTTTACCGCCTGTGGAGTTCCATaGCTGCACTGGATTAACACT +
Preference number: 5 (lower is better)
Translates to: TKAVLEKLQAATPPTPFTACGVP*LHWINT
Trigger: AGTGTTAATCCAGTGCAGCAATGGAACTCCACAGGC...GGTAAAGGGAGTGGGTGGGGTTGCTGCCTGCAATTTCTCTAAAACCGCTTTAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp AACTTTTACAGCCACCCCTCTGGGAGTTGTACACACCTTTCAGTAGCCGAAGGGGATCAGCAAAGCCCTTaGGGAGCATTGTACAAGAGA +
Preference number: 5 (lower is better)
Translates to: NFYSHPSGSCTHLSVAEGDQQSP*GALYKR
Trigger: TCTCTTGTACAATGCTCCCAAAGGGCTTTGCTGATC...CCCTTCGGCTACTGAAAGGTGTGTACAACTCCCAGAGGGGTGGCTGTAAAAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp AACTGCAGGCCCCCTGGAATTTACCTGGCCATCAGACCTGCCAGCAACAGTGGCTATCTACTTCCTCTATaGCCCATCAAAGAGAGAAAA +
Preference number: 5 (lower is better)
Translates to: NCRPPGIYLAIRPASNSGYLLPL*PIKERK
Trigger: TTTTCTCTCTTTGATGGGCAATAGAGGAAGTAGATA...GCCACTGTTGCTGGCAGGTCTGATGGCCAGGTAAATTCCAGGGGGCCTGCAGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp CAAAGGGTAAAAGCGTGCTGCCCGCTCTGCACACGGCAGAAGCTGGAAAATGCCCAATTTCCTAGTCCATaGTTGTTCTCTGTAGTAGAG +
Preference number: 5 (lower is better)
Translates to: QRVKACCPLCTRQKLENAQFPSP*LFSVVE
Trigger: CTCTACTACAGAGAACAACAATGGACTAGGAAATTG...GGCATTTTCCAGCTTCTGCCGTGTGCAGAGCGGGCAGCACGCTTTTACCCTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp ACTAAAGCGGTTTTAGAGAAATTGCAGGCAGCAACCCCACCCACTCCCTTTACCGGCCAGGCAGATGGGTaGCTATTTGGGTTAAAGTTG +
Preference number: 5 (lower is better)
Translates to: TKAVLEKLQAATPPTPFTGQADG*LFGLKL
Trigger: CAACTTTAACCCAAATAGCAACCCATCTGCCTGGCC...GGTAAAGGGAGTGGGTGGGGTTGCTGCCTGCAATTTCTCTAAAACCGCTTTAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp CACACACATGTGCGTCCCCCTTGCTCAGGATGTCTGGGTGTATGTACGAAGGCAATCAGTGTTATGAATTaGAGCCTGTTCTCTGCCAGA +
Preference number: 5 (lower is better)
Translates to: HTHVRPPCSGCLGVCTKAISVMN*SLFSAR
Trigger: TCTGGCAGAGAACAGGCTCAAATTCATAACACTGAT...TGCCTTCGTACATACACCCAGACATCCTGAGCAAGGGGGACGCACATGTGTGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp TCTGAACCAAGAAAGGTTGAGAGCTCCAGGTATTGTGTGGAGAACATTCTGGAGATTTCCCCTCAGGCCTaGGCACCTCTTCAATGTCCC +
Preference number: 5 (lower is better)
Translates to: SEPRKVESSRYCVENILEISPQA*APLQCP
Trigger: GGGACATTGAAGAGGTGCCAAGGCCTGAGGGGAAAT...CTCCAGAATGTTCTCCACACAATACCTGGAGCTCTCAACCTTTCTTGGTTCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp TGTGCACGTGTCTCTGTGAGCACATTCACGGTGCATGCACCATTTTTGATGTCTCGTCCTCCTCCCCAGTaGGAAGAGTTGTTGTTCTTG +
Preference number: 5 (lower is better)
Translates to: CARVSVSTFTVHAPFLMSRPPPQ*EELLFL
Trigger: CAAGAACAACAACTCTTCCAACTGGGGAGGAGGACG...AGACATCAAAAATGGTGCATGCACCGTGAATGTGCTCACAGAGACACGTGCACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp GGGTTTATCTTAAAGATGGGGGCGAAGGGGGTGTCTGCAAAGAAGCAATTCAAACCTCCCACCCACCTTTaGAAGCTAGGCTTGCATTGC +
Preference number: 5 (lower is better)
Translates to: GFILKMGAKGVSAKKQFKPPTHL*KLGLHC
Trigger: GCAATGCAAGCCTAGCTTCAAAAGGTGGGTGGGAGG...TTTGAATTGCTTCTTTGCAGACACCCCCTTCGCCCCCATCTTTAAGATAAACCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp TCTGAACCAAGAAAGGTTGAGAGCTCCAGGTATTGTGTGGAGAACATTCTGGAGCATGCTGGGGATCTTTaGCAATCCTCCCACCCACCT +
Preference number: 5 (lower is better)
Translates to: SEPRKVESSRYCVENILEHAGDL*QSSHPP
Trigger: AGGTGGGTGGGAGGATTGCAAAAGATCCCCAGCATG...CTCCAGAATGTTCTCCACACAATACCTGGAGCTCTCAACCTTTCTTGGTTCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp TCTGGTGCATCTTTAATTCAGCAGCTGCCAGAATACTCACGGGTGCATCTTCATCTGCTCCAGCTGGAATaGGAAGGTCGAACGTTGCCT +
Preference number: 5 (lower is better)
Translates to: SGASLIQQLPEYSRVHLHLLQLE*EGRTLP
Trigger: AGGCAACGTTCGACCTTCCAATTCCAGCTGGAGCAG...ATGAAGATGCACCCGTGAGTATTCTGGCAGCTGCTGAATTAAAGATGCACCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR CAA 90 bp GGGTTTATCTTAAAGATGGGGGCGAAGGGGGTGTCTGCAAAGAAGCAATTCAAACTGCTCCAGCTGGAATaGGAAGGTCGAACGTTGCCT +
Preference number: 5 (lower is better)
Translates to: GFILKMGAKGVSAKKQFKLLQLE*EGRTLP
Trigger: AGGCAACGTTCGACCTTCCAATTCCAGCTGGAGCAG...TTTGAATTGCTTCTTTGCAGACACCCCCTTCGCCCCCATCTTTAAGATAAACCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS TCA 90 bp ACCAACAACTTACCAGAACCATATCCAGGTATTGGCCCTTTGGTTTaGAGGTCTGGGAGCCCCACATTCAATGCGTTGGGTACCATGTTG +
Preference number: 5 (lower is better)
Translates to: TNNLPEPYPGIGPLV*RSGSPTFNALGTML
Trigger: CAACATGGTACCCAACGCATTGAATGTGGGGCTCCCAGACCTTCAAACCAAAGGGCCAATACCTGGATATGGTTCTGGTAAGTTGTTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467658.1
CDS GCA 90 bp CTTGCTCCTTCTCTTGTTTGCTTTCTTCACCAGGAGGTGGAGTCTTaGCATGCCCTTCCATTACAAAATCCTCCTGTTCCACCTTGGAAC +
Preference number: 5 (lower is better)
Translates to: LAPSLVCFLHQEVES*HALPLQNPPVPPWN
Trigger: GTTCCAAGGTGGAACAGGAGGATTTTGTAATGGAAGGGCATGGCAAGACTCCACCTCCTGGTGAAGAAAGCAAACAAGAGAAGGAGCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301923.13
ENST00000402203.5
CDS CCA 90 bp TGGCATTGCTGGATTTACTTCCGATTTTATTTGTTGGTGGAGATTTaGCAGGTAACCAGCTATCACCAGCAGGACCCGTATGGCCACCCA +
Preference number: 5 (lower is better)
Translates to: WHCWIYFRFYLLVEI*QVTSYHQQDPYGHP
Trigger: TGGGTGGCCATACGGGTCCTGCTGGTGATAGCTGGTTACCTGCCAAATCTCCACCAACAAATAAAATCGGAAGTAAATCCAGCAATGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000402203.5
ENST00000446273.1
ENST00000454349.7
CDS CCA 90 bp TCCAAGAGGAAGGTGTCTTTTCATCAGGTCGTCCTCCTCCCCAGTTaGAAGAGTTGTTGTTCTTGTAGTCATTCCAGCCTCCTGTGTTCT +
Preference number: 5 (lower is better)
Translates to: SKRKVSFHQVVLLPS*KSCCSCSHSSLLCS
Trigger: AGAACACAGGAGGCTGGAATGACTACAAGAACAACAACTCTTCCAACTGGGGAGGAGGACGACCTGATGAAAAGACACCTTCCTCTTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335727.13
ENST00000446273.1
ENST00000454349.7
CDS CCA 90 bp TCTCTACCAACAACTTACCAGAACCATATCCAGGTATTGGCCCTTTaGTTTGAAGGTCTGGGAGCCCCACATTCAATGCGTTGGGTACCA +
Preference number: 5 (lower is better)
Translates to: SLPTTYQNHIQVLAL*FEGLGAPHSMRWVP
Trigger: TGGTACCCAACGCATTGAATGTGGGGCTCCCAGACCTTCAAACCAAAGGGCCAATACCTGGATATGGTTCTGGTAAGTTGTTGGTAGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467658.1
CDS-3UTR CAA 90 bp CACACACATGTGCGTCCCCCTTGCTCAGGATGTCTGGGTGTATGTACGAAGGCATTCATCCATGAATCATaGTTTCCTCCTTTGAGTGAG +
Preference number: 5 (lower is better)
Translates to: HTHVRPPCSGCLGVCTKAFIHES*FPPLSE
Trigger: CTCACTCAAAGGAGGAAACAATGATTCATGGATGAA...TGCCTTCGTACATACACCCAGACATCCTGAGCAAGGGGGACGCACATGTGTGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp GGGTTTATCTTAAAGATGGGGGCGAAGGGGGTGTCTGCAAAGAAGCAATTCAAAGGACTCAGGCCACTGTaGGGAAACTGCTTGAGCATT +
Preference number: 5 (lower is better)
Translates to: GFILKMGAKGVSAKKQFKGLRPL*GNCLSI
Trigger: AATGCTCAAGCAGTTTCCCAACAGTGGCCTGAGTCC...TTTGAATTGCTTCTTTGCAGACACCCCCTTCGCCCCCATCTTTAAGATAAACCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp TGGAATTCTGACGACTGGCCTCTGATATATACAGGACAATCCAAGCTTTGGTGGATGATATCAAACTGGTaGTACGGTGACCCTCCCCGG +
Preference number: 5 (lower is better)
Translates to: WNSDDWPLIYTGQSKLWWMISNW*YGDPPR
Trigger: CCGGGGAGGGTCACCGTACAACCAGTTTGATATCAT...CCACCAAAGCTTGGATTGTCCTGTATATATCAGAGGCCAGTCGTCAGAATTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR CAA 90 bp TCTGACGACTGGCCTCTGATATATACAGGACAATCCAAGCTTTGGTGGAAAAGACCATGGCACTCCTGGTaGGAATTCTGGAGGCCAACT +
Preference number: 5 (lower is better)
Translates to: SDDWPLIYTGQSKLWWKRPWHSW*EFWRPT
Trigger: AGTTGGCCTCCAGAATTCCAACCAGGAGTGCCATGG...TCTTTTCCACCAAAGCTTGGATTGTCCTGTATATATCAGAGGCCAGTCGTCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR CAA 90 bp TCTGAACCAAGAAAGGTTGAGAGCTCCAGGTATTGTGTGGAGAACATTCTGGAGGAAGGCAGCGAGGTGTaGAGGGAAGAATTAGACCCT +
Preference number: 5 (lower is better)
Translates to: SEPRKVESSRYCVENILEEGSEV*REELDP
Trigger: AGGGTCTAATTCTTCCCTCAACACCTCGCTGCCTTC...CTCCAGAATGTTCTCCACACAATACCTGGAGCTCTCAACCTTTCTTGGTTCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp TTAAGGGTTTACATTGCAGGGGGAAATGTACCTCGAGGTATTATTTTGTGTGAGAGTGCAGTTTGGGCCTaGGCCGCCTCCTGTTTGGTG +
Preference number: 5 (lower is better)
Translates to: LRVYIAGGNVPRGIILCESAVWA*AASCLV
Trigger: CACCAAACAGGAGGCGGCCAAGGCCCAAACTGCACT...CTCACACAAAATAATACCTCGAGGTACATTTCCCCCTGCAATGTAAACCCTTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp AATGAAGCTGAAGGAATCGAGTGGGAGGGACTGTTCTCCTCTTTGGGGGAGCTCTATGTGAACACTCACTaGAGTCATGCCTGTCAATCT +
Preference number: 5 (lower is better)
Translates to: NEAEGIEWEGLFSSLGELYVNTH*SHACQS
Trigger: AGATTGACAGGCATGACTCAAGTGAGTGTTCACATA...GAGCTCCCCCAAAGAGGAGAACAGTCCCTCCCACTCGATTCCTTCAGCTTCATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp GGATTTTTGCTGTACCTTCCTGTTACCTGTTTGTGTGCAAAGTTGGAAAGCTGCCTGGAAGCAGAGCTTTaGCATGGGGAACAGTGGTGG +
Preference number: 5 (lower is better)
Translates to: GFLLYLPVTCLCAKLESCLEAEL*HGEQWW
Trigger: CCACCACTGTTCCCCATGCAAAAGCTCTGCTTCCAG...GCAGCTTTCCAACTTTGCACACAAACAGGTAACAGGAAGGTACAGCAAAAATCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp TTAAGGGTTTACATTGCAGGGGGAAATGTACCTCGAGGTATTATTTTGTGTGAGTTCAGCCCACTGCCTTaGGGGCCTGTCCAGAACCAC +
Preference number: 5 (lower is better)
Translates to: LRVYIAGGNVPRGIILCEFSPLP*GPVQNH
Trigger: GTGGTTCTGGACAGGCCCCAAAGGCAGTGGGCTGAA...CTCACACAAAATAATACCTCGAGGTACATTTCCCCCTGCAATGTAAACCCTTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp AACTTTTACAGCCACCCCTCTGGGAGTTGTACACACCTTTCAGTAGCCGAAGGGACTTTCGTTACTTTTTaGGGTGGCGGTAGGAGGTTA +
Preference number: 5 (lower is better)
Translates to: NFYSHPSGSCTHLSVAEGTFVTF*GGGRRL
Trigger: TAACCTCCTACCGCCACCCAAAAAAGTAACGAAAGT...CCCTTCGGCTACTGAAAGGTGTGTACAACTCCCAGAGGGGTGGCTGTAAAAGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp CACACACATGTGCGTCCCCCTTGCTCAGGATGTCTGGGTGTATGTACGAAGGCACCCAACTTGTTGATATaGGCTAGATATGGGTCAATT +
Preference number: 5 (lower is better)
Translates to: HTHVRPPCSGCLGVCTKAPNLLI*ARYGSI
Trigger: AATTGACCCATATCTAGCCAATATCAACAAGTTGGG...TGCCTTCGTACATACACCCAGACATCCTGAGCAAGGGGGACGCACATGTGTGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp AATGAAGCTGAAGGAATCGAGTGGGAGGGACTGTTCTCCTCTTTGGGGGAGCTCCTTGACAACTTTCTTTaGCAGCTTACTGTGAGCAGT +
Preference number: 5 (lower is better)
Translates to: NEAEGIEWEGLFSSLGELLDNFL*QLTVSS
Trigger: ACTGCTCACAGTAAGCTGCAAAAGAAAGTTGTCAAG...GAGCTCCCCCAAAGAGGAGAACAGTCCCTCCCACTCGATTCCTTCAGCTTCATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp AATGAAGCTGAAGGAATCGAGTGGGAGGGACTGTTCTCCTCTTTGGGGGAGCTCCTTCCAGGAGGAACTTaGACTTCCCTAATGACTAAA +
Preference number: 5 (lower is better)
Translates to: NEAEGIEWEGLFSSLGELLPGGT*TSLMTK
Trigger: TTTAGTCATTAGGGAAGTCAAAGTTCCTCCTGGAAG...GAGCTCCCCCAAAGAGGAGAACAGTCCCTCCCACTCGATTCCTTCAGCTTCATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp AACTTTTACAGCCACCCCTCTGGGAGTTGTACACACCTTTCAGTAGCCGAAGGGATCACTGCATACACTTaGGTCACTGGTGTGTGCAAA +
Preference number: 5 (lower is better)
Translates to: NFYSHPSGSCTHLSVAEGITAYT*VTGVCK
Trigger: TTTGCACACACCAGTGACCAAAGTGTATGCAGTGAT...CCCTTCGGCTACTGAAAGGTGTGTACAACTCCCAGAGGGGTGGCTGTAAAAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp ACTTTCAGGTCAGCACGAGTGAAGCGTGGTTTCCTGAGCTTGAAGGGCTCTGAAAGCCCCAAGTGGAATTaGCATAATTTGAAGCAGCAG +
Preference number: 5 (lower is better)
Translates to: TFRSARVKRGFLSLKGSESPKWN*HNLKQQ
Trigger: CTGCTGCTTCAAATTATGCAAATTCCACTTGGGGCT...TTCAGAGCCCTTCAAGCTCAGGAAACCACGCTTCACTCGTGCTGACCTGAAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp ACTAAAGCGGTTTTAGAGAAATTGCAGGCAGCAACCCCACCCACTCCCTTTACCGAAGATTCAGTGTCTTaGCTGGCAATACAAGGCCAC +
Preference number: 5 (lower is better)
Translates to: TKAVLEKLQAATPPTPFTEDSVS*LAIQGH
Trigger: GTGGCCTTGTATTGCCAGCAAAGACACTGAATCTTC...GGTAAAGGGAGTGGGTGGGGTTGCTGCCTGCAATTTCTCTAAAACCGCTTTAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp ACTTTCAGGTCAGCACGAGTGAAGCGTGGTTTCCTGAGCTTGAAGGGCTCTGAAAGTGCTAGAATTTGGTaGGTTTGGACCACTCCATTC +
Preference number: 5 (lower is better)
Translates to: TFRSARVKRGFLSLKGSESARIW*VWTTPF
Trigger: GAATGGAGTGGTCCAAACCAACCAAATTCTAGCACT...TTCAGAGCCCTTCAAGCTCAGGAAACCACGCTTCACTCGTGCTGACCTGAAAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp TCTGAACCAAGAAAGGTTGAGAGCTCCAGGTATTGTGTGGAGAACATTCTGGAGCAGCCTCCTGTGTTCTaGGGGTCTTTCCACTCTGTA +
Preference number: 5 (lower is better)
Translates to: SEPRKVESSRYCVENILEQPPVF*GSFHSV
Trigger: TACAGAGTGGAAAGACCCCAAGAACACAGGAGGCTG...CTCCAGAATGTTCTCCACACAATACCTGGAGCTCTCAACCTTTCTTGGTTCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp GGATTTTTGCTGTACCTTCCTGTTACCTGTTTGTGTGCAAAGTTGGAAAGCTGCCATGCTGGGGATCTTTaGCAATCCTCCCACCCACCT +
Preference number: 5 (lower is better)
Translates to: GFLLYLPVTCLCAKLESCHAGDL*QSSHPP
Trigger: AGGTGGGTGGGAGGATTGCAAAAGATCCCCAGCATG...GCAGCTTTCCAACTTTGCACACAAACAGGTAACAGGAAGGTACAGCAAAAATCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp GGGTTTATCTTAAAGATGGGGGCGAAGGGGGTGTCTGCAAAGAAGCAATTCAAACCGATTTACTGGTCATaGGGGTGGGCAGGTTTGGTT +
Preference number: 5 (lower is better)
Translates to: GFILKMGAKGVSAKKQFKPIYWS*GWAGLV
Trigger: AACCAAACCTGCCCACCCCAATGACCAGTAAATCGG...TTTGAATTGCTTCTTTGCAGACACCCCCTTCGCCCCCATCTTTAAGATAAACCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS GCA 90 bp TCCTTCTCTTGTTTGCTTTCTTCACCAGGAGGTGGAGTCTTGCCATaGCCTTCCATTACAAAATCCTCCTGTTCCACCTTGGAACTGCTT +
Preference number: 5 (lower is better)
Translates to: SFSCLLSSPGGGVLP*PSITKSSCSTLELL
Trigger: AAGCAGTTCCAAGGTGGAACAGGAGGATTTTGTAATGGAAGGGCATGGCAAGACTCCACCTCCTGGTGAAGAAAGCAAACAAGAGAAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301923.13
ENST00000402203.5
CDS GCA 90 bp AATTTAGTGGCTGCACGGGTGTGTGCAGACCTCTCGATTGTGCTGTaGTGTTTCCAAACAAACCATGACTACCGCCCTTCTCAAAATAAG +
Preference number: 5 (lower is better)
Translates to: NLVAARVCADLSIVL*CFQTNHDYRPSQNK
Trigger: CTTATTTTGAGAAGGGCGGTAGTCATGGTTTGTTTGGAAACAGCACAGCACAATCGAGAGGTCTGCACACACCCGTGCAGCCACTAAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000402203.5
ENST00000446273.1
ENST00000497559.1
CDS GCA 90 bp ATCTGTTTCCAATGCCCCTTTCCTAGAAGTTCCTTCTTGGACCAGTaGTGGCCAGGCAGATGGGTTGCTATTTGGGTTAAAGTTGCTGAA +
Preference number: 5 (lower is better)
Translates to: ICFQCPFPRSSFLDQ*WPGRWVAIWVKVAE
Trigger: TTCAGCAACTTTAACCCAAATAGCAACCCATCTGCCTGGCCAGCACTGGTCCAAGAAGGAACTTCTAGGAAAGGGGCATTGGAAACAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335727.13
ENST00000446273.1
ENST00000454349.7
CDS GCA 90 bp TACTGTGCTAACCTGTGCACTGGAATTACTATTATCTGTTTCCAATaGCCCTTTCCTAGAAGTTCCTTCTTGGACCAGTGCTGGCCAGGC +
Preference number: 5 (lower is better)
Translates to: YCANLCTGITIICFQ*PFPRSSFLDQCWPG
Trigger: GCCTGGCCAGCACTGGTCCAAGAAGGAACTTCTAGGAAAGGGGCATTGGAAACAGATAATAGTAATTCCAGTGCACAGGTTAGCACAGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335727.13
ENST00000446273.1
ENST00000454349.7
CDS CCA 90 bp GCCCTTTTGATTGTCCCATGCTCCAGTGCTAGAATTTGGTTGGTTTaGACCACTCCATTCTCCAATTTTCAACTCATCAGACCCAGTCGG +
Preference number: 5 (lower is better)
Translates to: ALLIVPCSSARIWLV*TTPFSNFQLIRPSR
Trigger: CCGACTGGGTCTGATGAGTTGAAAATTGGAGAATGGAGTGGTCCAAACCAACCAAATTCTAGCACTGGAGCATGGGACAATCAAAAGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335727.13
ENST00000446273.1
ENST00000454349.7
CDS-3UTR CAA 90 bp GGATTTTTGCTGTACCTTCCTGTTACCTGTTTGTGTGCAAAGTTGGAAAGCTGCGCCACCCTTTTGGCATaGTTGCCACCATTGACTGGT +
Preference number: 5 (lower is better)
Translates to: GFLLYLPVTCLCAKLESCATLLA*LPPLTG
Trigger: ACCAGTCAATGGTGGCAACAATGCCAAAAGGGTGGC...GCAGCTTTCCAACTTTGCACACAAACAGGTAACAGGAAGGTACAGCAAAAATCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp TCCCTAATGACTAAAGCTGACCGTCTGTTTGTTTGTATCCAACGGATAGCTTCTGGCACTGCCACCCTTTaGGCATTGTTGCCACCATTG +
Preference number: 5 (lower is better)
Translates to: SLMTKADRLFVCIQRIASGTATL*ALLPPL
Trigger: CAATGGTGGCAACAATGCCAAAAGGGTGGCAGTGCC...AGAAGCTATCCGTTGGATACAAACAAACAGACGGTCAGCTTTAGTCATTAGGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp TTAAGGGTTTACATTGCAGGGGGAAATGTACCTCGAGGTATTATTTTGTGTGAGGTGCGTTGTTTGGGTTaGCTCCAGGTGCTGTGCAGG +
Preference number: 5 (lower is better)
Translates to: LRVYIAGGNVPRGIILCEVRCLG*LQVLCR
Trigger: CCTGCACAGCACCTGGAGCAAACCCAAACAACGCAC...CTCACACAAAATAATACCTCGAGGTACATTTCCCCCTGCAATGTAAACCCTTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp TGGAATTCTGACGACTGGCCTCTGATATATACAGGACAATCCAAGCTTTGGTGGCTGTTGGGAAACTGCTaGAGCATTGAGGCAGAAACC +
Preference number: 5 (lower is better)
Translates to: WNSDDWPLIYTGQSKLWWLLGNC*SIEAET
Trigger: GGTTTCTGCCTCAATGCTCAAGCAGTTTCCCAACAG...CCACCAAAGCTTGGATTGTCCTGTATATATCAGAGGCCAGTCGTCAGAATTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR CAA 90 bp GGGTTTATCTTAAAGATGGGGGCGAAGGGGGTGTCTGCAAAGAAGCAATTCAAACTGTTGGGAAACTGCTaGAGCATTGAGGCAGAAACC +
Preference number: 5 (lower is better)
Translates to: GFILKMGAKGVSAKKQFKLLGNC*SIEAET
Trigger: GGTTTCTGCCTCAATGCTCAAGCAGTTTCCCAACAG...TTTGAATTGCTTCTTTGCAGACACCCCCTTCGCCCCCATCTTTAAGATAAACCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp TCTGACGACTGGCCTCTGATATATACAGGACAATCCAAGCTTTGGTGGAAAAGAGGACTCAGGCCACTGTaGGGAAACTGCTTGAGCATT +
Preference number: 5 (lower is better)
Translates to: SDDWPLIYTGQSKLWWKRGLRPL*GNCLSI
Trigger: AATGCTCAAGCAGTTTCCCAACAGTGGCCTGAGTCC...TCTTTTCCACCAAAGCTTGGATTGTCCTGTATATATCAGAGGCCAGTCGTCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR CAA 90 bp GGATTTTTGCTGTACCTTCCTGTTACCTGTTTGTGTGCAAAGTTGGAAAGCTGCGGACTCAGGCCACTGTaGGGAAACTGCTTGAGCATT +
Preference number: 5 (lower is better)
Translates to: GFLLYLPVTCLCAKLESCGLRPL*GNCLSI
Trigger: AATGCTCAAGCAGTTTCCCAACAGTGGCCTGAGTCC...GCAGCTTTCCAACTTTGCACACAAACAGGTAACAGGAAGGTACAGCAAAAATCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp CTCTCCACACTCGAGACTTGCAGATGCACGTGTGACGGTGCCATTCTTCGTATAACTATAGCGCCATTTTaGTGCATATTGGCTTCCTGT +
Preference number: 5 (lower is better)
Translates to: LSTLETCRCTCDGAILRITIAPF*CILASC
Trigger: ACAGGAAGCCAATATGCACAAAAATGGCGCTATAGT...TATACGAAGAATGGCACCGTCACACGTGCATCTGCAAGTCTCGAGTGTGGAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR CAA 90 bp GGATTTTTGCTGTACCTTCCTGTTACCTGTTTGTGTGCAAAGTTGGAAAGCTGCATGATATCAAACTGGTaGTACGGTGACCCTCCCCGG +
Preference number: 5 (lower is better)
Translates to: GFLLYLPVTCLCAKLESCMISNW*YGDPPR
Trigger: CCGGGGAGGGTCACCGTACAACCAGTTTGATATCAT...GCAGCTTTCCAACTTTGCACACAAACAGGTAACAGGAAGGTACAGCAAAAATCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp GGGTTTATCTTAAAGATGGGGGCGAAGGGGGTGTCTGCAAAGAAGCAATTCAAAGGAGGCCAACTGGCATaGCTGGATTTACTTCCGATT +
Preference number: 5 (lower is better)
Translates to: GFILKMGAKGVSAKKQFKGGQLA*LDLLPI
Trigger: AATCGGAAGTAAATCCAGCAATGCCAGTTGGCCTCC...TTTGAATTGCTTCTTTGCAGACACCCCCTTCGCCCCCATCTTTAAGATAAACCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp TCTGACGACTGGCCTCTGATATATACAGGACAATCCAAGCTTTGGTGGAAAAGAGAAGGCAGCGAGGTGTaGAGGGAAGAATTAGACCCT +
Preference number: 5 (lower is better)
Translates to: SDDWPLIYTGQSKLWWKREGSEV*REELDP
Trigger: AGGGTCTAATTCTTCCCTCAACACCTCGCTGCCTTC...TCTTTTCCACCAAAGCTTGGATTGTCCTGTATATATCAGAGGCCAGTCGTCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR CAA 90 bp TTAAGGGTTTACATTGCAGGGGGAAATGTACCTCGAGGTATTATTTTGTGTGAGGATGATGGTTTGGGGTaGGTCAGACCAGGAGGTGGG +
Preference number: 5 (lower is better)
Translates to: LRVYIAGGNVPRGIILCEDDGLG*VRPGGG
Trigger: CCCACCTCCTGGTCTGACCAACCCCAAACCATCATC...CTCACACAAAATAATACCTCGAGGTACATTTCCCCCTGCAATGTAAACCCTTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp TGTGCACGTGTCTCTGTGAGCACATTCACGGTGCATGCACCATTTTTGATGTCTAGTTCTAAGTTCAGATaGAATCCGACCCTCCTCCCA +
Preference number: 5 (lower is better)
Translates to: CARVSVSTFTVHAPFLMSSSKFR*NPTLLP
Trigger: TGGGAGGAGGGTCGGATTCAATCTGAACTTAGAACT...AGACATCAAAAATGGTGCATGCACCGTGAATGTGCTCACAGAGACACGTGCACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp AACTTTTACAGCCACCCCTCTGGGAGTTGTACACACCTTTCAGTAGCCGAAGGGTATGTGAACACTCACTaGAGTCATGCCTGTCAATCT +
Preference number: 5 (lower is better)
Translates to: NFYSHPSGSCTHLSVAEGYVNTH*SHACQS
Trigger: AGATTGACAGGCATGACTCAAGTGAGTGTTCACATA...CCCTTCGGCTACTGAAAGGTGTGTACAACTCCCAGAGGGGTGGCTGTAAAAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp ACTAAAGCGGTTTTAGAGAAATTGCAGGCAGCAACCCCACCCACTCCCTTTACCGACACAGGAAGGAACTaGGCATTCTACATTACTGAG +
Preference number: 5 (lower is better)
Translates to: TKAVLEKLQAATPPTPFTDTGRN*AFYITE
Trigger: CTCAGTAATGTAGAATGCCAAGTTCCTTCCTGTGTC...GGTAAAGGGAGTGGGTGGGGTTGCTGCCTGCAATTTCTCTAAAACCGCTTTAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp ACTAAAGCGGTTTTAGAGAAATTGCAGGCAGCAACCCCACCCACTCCCTTTACCGTATCTGTGTGTTTCTaGACTGTATGGACTCCCTGT +
Preference number: 5 (lower is better)
Translates to: TKAVLEKLQAATPPTPFTVSVCF*TVWTPC
Trigger: ACAGGGAGTCCATACAGTCAAGAAACACACAGATAC...GGTAAAGGGAGTGGGTGGGGTTGCTGCCTGCAATTTCTCTAAAACCGCTTTAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp AATGAAGCTGAAGGAATCGAGTGGGAGGGACTGTTCTCCTCTTTGGGGGAGCTCCCCAACTTGTTGATATaGGCTAGATATGGGTCAATT +
Preference number: 5 (lower is better)
Translates to: NEAEGIEWEGLFSSLGELPNLLI*ARYGSI
Trigger: AATTGACCCATATCTAGCCAATATCAACAAGTTGGG...GAGCTCCCCCAAAGAGGAGAACAGTCCCTCCCACTCGATTCCTTCAGCTTCATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp ACTTTCAGGTCAGCACGAGTGAAGCGTGGTTTCCTGAGCTTGAAGGGCTCTGAAAACCATCCCAACTTGTaGATATTGGCTAGATATGGG +
Preference number: 5 (lower is better)
Translates to: TFRSARVKRGFLSLKGSENHPNL*ILARYG
Trigger: CCCATATCTAGCCAATATCAACAAGTTGGGATGGTT...TTCAGAGCCCTTCAAGCTCAGGAAACCACGCTTCACTCGTGCTGACCTGAAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp ACTTTCAGGTCAGCACGAGTGAAGCGTGGTTTCCTGAGCTTGAAGGGCTCTGAACTTCCAGGAGGAACTTaGACTTCCCTAATGACTAAA +
Preference number: 5 (lower is better)
Translates to: TFRSARVKRGFLSLKGSELPGGT*TSLMTK
Trigger: TTTAGTCATTAGGGAAGTCAAAGTTCCTCCTGGAAG...TTCAGAGCCCTTCAAGCTCAGGAAACCACGCTTCACTCGTGCTGACCTGAAAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp CCCCTGTCTCCTCTCCCAAGTCCCAGAATCTCTTCCACTCAACTCTACACTGTGAAGCTGGAAAATGCCTaGTTTACATGCATGAATGTG +
Preference number: 5 (lower is better)
Translates to: PLSPLPSPRISSTQLYTVKLENA*FTCMNV
Trigger: CACATTCATGCATGTAAACAAGGCATTTTCCAGCTT...CACAGTGTAGAGTTGAGTGGAAGAGATTCTGGGACTTGGGAGAGGAGACAGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp TCTGAACCAAGAAAGGTTGAGAGCTCCAGGTATTGTGTGGAGAACATTCTGGAGAGCCCTTTGGGAGCATaGTACAAGAGATACAAGGGC +
Preference number: 5 (lower is better)
Translates to: SEPRKVESSRYCVENILESPLGA*YKRYKG
Trigger: GCCCTTGTATCTCTTGTACAATGCTCCCAAAGGGCT...CTCCAGAATGTTCTCCACACAATACCTGGAGCTCTCAACCTTTCTTGGTTCAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp GGGTTTATCTTAAAGATGGGGGCGAAGGGGGTGTCTGCAAAGAAGCAATTCAAAAGCCCTTTGGGAGCATaGTACAAGAGATACAAGGGC +
Preference number: 5 (lower is better)
Translates to: GFILKMGAKGVSAKKQFKSPLGA*YKRYKG
Trigger: GCCCTTGTATCTCTTGTACAATGCTCCCAAAGGGCT...TTTGAATTGCTTCTTTGCAGACACCCCCTTCGCCCCCATCTTTAAGATAAACCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp ACTAAAGCGGTTTTAGAGAAATTGCAGGCAGCAACCCCACCCACTCCCTTTACCAAATCCAGCCTCTTTTaGATGCCCTTTTCTGCACCT +
Preference number: 5 (lower is better)
Translates to: TKAVLEKLQAATPPTPFTKSSLF*MPFSAP
Trigger: AGGTGCAGAAAAGGGCATCAAAAAGAGGCTGGATTT...GGTAAAGGGAGTGGGTGGGGTTGCTGCCTGCAATTTCTCTAAAACCGCTTTAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp CACACACATGTGCGTCCCCCTTGCTCAGGATGTCTGGGTGTATGTACGAAGGCATGTTTGTGTGCAAAGTaGGAAAGCTGCCTTTTAAAA +
Preference number: 5 (lower is better)
Translates to: HTHVRPPCSGCLGVCTKACLCAK*ESCLLK
Trigger: TTTTAAAAGGCAGCTTTCCAACTTTGCACACAAACA...TGCCTTCGTACATACACCCAGACATCCTGAGCAAGGGGGACGCACATGTGTGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp TGTGCACGTGTCTCTGTGAGCACATTCACGGTGCATGCACCATTTTTGATGTCTTGGCTCCCTTTTCCTTaGTTACTAGTGGTGCTTCCT +
Preference number: 5 (lower is better)
Translates to: CARVSVSTFTVHAPFLMSWLPFP*LLVVLP
Trigger: AGGAAGCACCACTAGTAACAAAGGAAAAGGGAGCCA...AGACATCAAAAATGGTGCATGCACCGTGAATGTGCTCACAGAGACACGTGCACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp CCCCTGTCTCCTCTCCCAAGTCCCAGAATCTCTTCCACTCAACTCTACACTGTGTTTCCTAGTCCATTGTaGTTCTCTGTAGTAGAGTTG +
Preference number: 5 (lower is better)
Translates to: PLSPLPSPRISSTQLYTVFPSPL*FSVVEL
Trigger: CAACTCTACTACAGAGAACAACAATGGACTAGGAAA...CACAGTGTAGAGTTGAGTGGAAGAGATTCTGGGACTTGGGAGAGGAGACAGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp AATGAAGCTGAAGGAATCGAGTGGGAGGGACTGTTCTCCTCTTTGGGGGAGCTCCAATTTCCTAGTCCATaGTTGTTCTCTGTAGTAGAG +
Preference number: 5 (lower is better)
Translates to: NEAEGIEWEGLFSSLGELQFPSP*LFSVVE
Trigger: CTCTACTACAGAGAACAACAATGGACTAGGAAATTG...GAGCTCCCCCAAAGAGGAGAACAGTCCCTCCCACTCGATTCCTTCAGCTTCATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp ACTTTCAGGTCAGCACGAGTGAAGCGTGGTTTCCTGAGCTTGAAGGGCTCTGAATATTCTCCATGGGGTTaGGTGAACTTAAGTTCAAGG +
Preference number: 5 (lower is better)
Translates to: TFRSARVKRGFLSLKGSEYSPWG*VNLSSR
Trigger: CCTTGAACTTAAGTTCACCAAACCCCATGGAGAATA...TTCAGAGCCCTTCAAGCTCAGGAAACCACGCTTCACTCGTGCTGACCTGAAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp GCAGCTGCCAGAATACTCACGGGTGCATCTTCATGCATGTTTGTCTACGTGGGTTATTCTCCATGGGGTTaGGTGAACTTAAGTTCAAGG +
Preference number: 5 (lower is better)
Translates to: AAARILTGASSCMFVYVGYSPWG*VNLSSR
Trigger: CCTTGAACTTAAGTTCACCAAACCCCATGGAGAATA...ACCCACGTAGACAAACATGCATGAAGATGCACCCGTGAGTATTCTGGCAGCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR CAA 90 bp GGGTTTATCTTAAAGATGGGGGCGAAGGGGGTGTCTGCAAAGAAGCAATTCAAAGTTGCTTCCAGTGCTTaGACCTCCAACTTCACTTCC +
Preference number: 5 (lower is better)
Translates to: GFILKMGAKGVSAKKQFKVASSA*TSNFTS
Trigger: GGAAGTGAAGTTGGAGGTCAAAGCACTGGAAGCAAC...TTTGAATTGCTTCTTTGCAGACACCCCCTTCGCCCCCATCTTTAAGATAAACCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp TCTGGTGCATCTTTAATTCAGCAGCTGCCAGAATACTCACGGGTGCATCTTCATGTTGCTTCCAGTGCTTaGACCTCCAACTTCACTTCC +
Preference number: 5 (lower is better)
Translates to: SGASLIQQLPEYSRVHLHVASSA*TSNFTS
Trigger: GGAAGTGAAGTTGGAGGTCAAAGCACTGGAAGCAAC...ATGAAGATGCACCCGTGAGTATTCTGGCAGCTGCTGAATTAAAGATGCACCAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR CAA 90 bp GGGTTTATCTTAAAGATGGGGGCGAAGGGGGTGTCTGCAAAGAAGCAATTCAAATGTGTCCTGCTTAATTaGAGTTTGGCCCCAGCCAGT +
Preference number: 5 (lower is better)
Translates to: GFILKMGAKGVSAKKQFKCVLLN*SLAPAS
Trigger: ACTGGCTGGGGCCAAACTCAAATTAAGCAGGACACA...TTTGAATTGCTTCTTTGCAGACACCCCCTTCGCCCCCATCTTTAAGATAAACCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp TCTGAACCAAGAAAGGTTGAGAGCTCCAGGTATTGTGTGGAGAACATTCTGGAGCTTCATTTGATTGCTTaGGCTGGGTGCATCTCCCCA +
Preference number: 5 (lower is better)
Translates to: SEPRKVESSRYCVENILELHLIA*AGCISP
Trigger: TGGGGAGATGCACCCAGCCAAAGCAATCAAATGAAG...CTCCAGAATGTTCTCCACACAATACCTGGAGCTCTCAACCTTTCTTGGTTCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp TGTGCACGTGTCTCTGTGAGCACATTCACGGTGCATGCACCATTTTTGATGTCTCCCAATTGCTGTTTTTaGTCTGATCGACTTCCTCCC +
Preference number: 5 (lower is better)
Translates to: CARVSVSTFTVHAPFLMSPNCCF*SDRLPP
Trigger: GGGAGGAAGTCGATCAGACAAAAAACAGCAATTGGG...AGACATCAAAAATGGTGCATGCACCGTGAATGTGCTCACAGAGACACGTGCACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp CCACACTCGAGACTTGCAGATGCACGTGTGACGGTGCCATTCTTCGTATATGTTCAGACACAGGTTTACTaGCAGAACTTTCCCAATTGC +
Preference number: 5 (lower is better)
Translates to: PHSRLADARVTVPFFVYVQTQVY*QNFPNC
Trigger: GCAATTGGGAAAGTTCTGCAAGTAAACCTGTGTCTG...AACATATACGAAGAATGGCACCGTCACACGTGCATCTGCAAGTCTCGAGTGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR CAA 90 bp GGATTTTTGCTGTACCTTCCTGTTACCTGTTTGTGTGCAAAGTTGGAAAGCTGCGAAGCTAGGCTTGCATaGCCACCATTACCCCAAGTC +
Preference number: 5 (lower is better)
Translates to: GFLLYLPVTCLCAKLESCEARLA*PPLPQV
Trigger: GACTTGGGGTAATGGTGGCAATGCAAGCCTAGCTTC...GCAGCTTTCCAACTTTGCACACAAACAGGTAACAGGAAGGTACAGCAAAAATCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp ATATGTTCTGGTGCATCTTTAATTCAGCAGCTGCCAGAATACTCACGGGTGCATTGTTTATTCCAGGAATaGGGCTGTCGGCCCGTCTCA +
Preference number: 5 (lower is better)
Translates to: ICSGASLIQQLPEYSRVHCLFQE*GCRPVS
Trigger: TGAGACGGGCCGACAGCCCAATTCCTGGAATAAACA...ATGCACCCGTGAGTATTCTGGCAGCTGCTGAATTAAAGATGCACCAGAACATAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR CAA 90 bp TTAAGGGTTTACATTGCAGGGGGAAATGTACCTCGAGGTATTATTTTGTGTGAGAGGTGCTGGGCCCCCTaGGGAATTCTTATCCCACAG +
Preference number: 5 (lower is better)
Translates to: LRVYIAGGNVPRGIILCERCWAP*GILIPQ
Trigger: CTGTGGGATAAGAATTCCCAAGGGGGCCCAGCACCT...CTCACACAAAATAATACCTCGAGGTACATTTCCCCCTGCAATGTAAACCCTTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS TCA 90 bp TTCTCTGCCAGAGACAACAAAATTAACACCCGCATTTTCCATCTTTaGCTGCTGTTCCCTGGATGTCTGACCTACTGTGCTAACCTGTGC +
Preference number: 5 (lower is better)
Translates to: FSARDNKINTRIFHL*LLFPGCLTYCANLC
Trigger: GCACAGGTTAGCACAGTAGGTCAGACATCCAGGGAACAGCAGTCAAAGATGGAAAATGCGGGTGTTAATTTTGTTGTCTCTGGCAGAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335727.13
ENST00000446273.1
ENST00000454349.7
CDS GCA 90 bp CACTGTTGTTATCGGTGGTGTTTTCGGAAGAAGATTCAGTGTCTTTaGTGGCAATACAAGGCCACTCTTCCATGTCAGACCCGTCTACAA +
Preference number: 5 (lower is better)
Translates to: HCCYRWCFRKKIQCL*WQYKATLPCQTRLQ
Trigger: TTGTAGACGGGTCTGACATGGAAGAGTGGCCTTGTATTGCCAGCAAAGACACTGAATCTTCTTCCGAAAACACCACCGATAACAACAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS GCA 90 bp ATCTTTAATTCAGCAGCTGCCAGAATACTCACGGGTGCATCTTCATaGATGTTTGTCTACGTGGGTGTAGGACCGAATACTCACATGTGC +
Preference number: 5 (lower is better)
Translates to: IFNSAAARILTGASS*MFVYVGVGPNTHMC
Trigger: GCACATGTGAGTATTCGGTCCTACACCCACGTAGACAAACATGCATGAAGATGCACCCGTGAGTATTCTGGCAGCTGCTGAATTAAAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR CAA 90 bp TCCCTAATGACTAAAGCTGACCGTCTGTTTGTTTGTATCCAACGGATAGCTTCTTCACTTGTGCGTTGTTaGGGTTTGCTCCAGGTGCTG +
Preference number: 5 (lower is better)
Translates to: SLMTKADRLFVCIQRIASSLVRC*GLLQVL
Trigger: CAGCACCTGGAGCAAACCCAAACAACGCACAAGTGA...AGAAGCTATCCGTTGGATACAAACAAACAGACGGTCAGCTTTAGTCATTAGGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp TCCCTAATGACTAAAGCTGACCGTCTGTTTGTTTGTATCCAACGGATAGCTTCTATGATATCAAACTGGTaGTACGGTGACCCTCCCCGG +
Preference number: 5 (lower is better)
Translates to: SLMTKADRLFVCIQRIASMISNW*YGDPPR
Trigger: CCGGGGAGGGTCACCGTACAACCAGTTTGATATCAT...AGAAGCTATCCGTTGGATACAAACAAACAGACGGTCAGCTTTAGTCATTAGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp TCTGACGACTGGCCTCTGATATATACAGGACAATCCAAGCTTTGGTGGAAAAGAGGAGGCCAACTGGCATaGCTGGATTTACTTCCGATT +
Preference number: 5 (lower is better)
Translates to: SDDWPLIYTGQSKLWWKRGGQLA*LDLLPI
Trigger: AATCGGAAGTAAATCCAGCAATGCCAGTTGGCCTCC...TCTTTTCCACCAAAGCTTGGATTGTCCTGTATATATCAGAGGCCAGTCGTCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR CAA 90 bp GGGTTTATCTTAAAGATGGGGGCGAAGGGGGTGTCTGCAAAGAAGCAATTCAAAGTTATCCCGCAGCAGTaGGTGGTCAGTATCTACAAT +
Preference number: 5 (lower is better)
Translates to: GFILKMGAKGVSAKKQFKVIPQQ*VVSIYN
Trigger: ATTGTAGATACTGACCACCAACTGCTGCGGGATAAC...TTTGAATTGCTTCTTTGCAGACACCCCCTTCGCCCCCATCTTTAAGATAAACCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp TGGAATTCTGACGACTGGCCTCTGATATATACAGGACAATCCAAGCTTTGGTGGGTTATCCCGCAGCAGTaGGTGGTCAGTATCTACAAT +
Preference number: 5 (lower is better)
Translates to: WNSDDWPLIYTGQSKLWWVIPQQ*VVSIYN
Trigger: ATTGTAGATACTGACCACCAACTGCTGCGGGATAAC...CCACCAAAGCTTGGATTGTCCTGTATATATCAGAGGCCAGTCGTCAGAATTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR CAA 90 bp ACTAAAGCGGTTTTAGAGAAATTGCAGGCAGCAACCCCACCCACTCCCTTTACCGTCACGAGGTCAGAGTaGAAAGTTCTAAGTTCAGAT +
Preference number: 5 (lower is better)
Translates to: TKAVLEKLQAATPPTPFTVTRSE*KVLSSD
Trigger: ATCTGAACTTAGAACTTTCAACTCTGACCTCGTGAC...GGTAAAGGGAGTGGGTGGGGTTGCTGCCTGCAATTTCTCTAAAACCGCTTTAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp TCTGAACCAAGAAAGGTTGAGAGCTCCAGGTATTGTGTGGAGAACATTCTGGAGGAAATAAACACACCGTaGCTCCAAGAGGTACCTCCT +
Preference number: 5 (lower is better)
Translates to: SEPRKVESSRYCVENILEEINTP*LQEVPP
Trigger: AGGAGGTACCTCTTGGAGCAACGGTGTGTTTATTTC...CTCCAGAATGTTCTCCACACAATACCTGGAGCTCTCAACCTTTCTTGGTTCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp TGTGCACGTGTCTCTGTGAGCACATTCACGGTGCATGCACCATTTTTGATGTCTAGTGCTTCTTTTCTTTaGGCTACTCGTGTGGTAGGT +
Preference number: 5 (lower is better)
Translates to: CARVSVSTFTVHAPFLMSSASFL*ATRVVG
Trigger: ACCTACCACACGAGTAGCCAAAAGAAAAGAAGCACT...AGACATCAAAAATGGTGCATGCACCGTGAATGTGCTCACAGAGACACGTGCACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp TCTGAACCAAGAAAGGTTGAGAGCTCCAGGTATTGTGTGGAGAACATTCTGGAGTCAACCCACAGGAGTTaGGAAGAACCGATTGCTAAC +
Preference number: 5 (lower is better)
Translates to: SEPRKVESSRYCVENILESTHRS*EEPIAN
Trigger: GTTAGCAATCGGTTCTTCCAAACTCCTGTGGGTTGA...CTCCAGAATGTTCTCCACACAATACCTGGAGCTCTCAACCTTTCTTGGTTCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp TGTGCACGTGTCTCTGTGAGCACATTCACGGTGCATGCACCATTTTTGATGTCTCTTGGCGTAAGCATTTaGCTCAGCATGCAGACATTT +
Preference number: 5 (lower is better)
Translates to: CARVSVSTFTVHAPFLMSLGVSI*LSMQTF
Trigger: AAATGTCTGCATGCTGAGCAAAATGCTTACGCCAAG...AGACATCAAAAATGGTGCATGCACCGTGAATGTGCTCACAGAGACACGTGCACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp ACTAAAGCGGTTTTAGAGAAATTGCAGGCAGCAACCCCACCCACTCCCTTTACCTTTTGCAAAGACCCTTaGGCCAAGGTAGTACCATTT +
Preference number: 5 (lower is better)
Translates to: TKAVLEKLQAATPPTPFTFCKDP*AKVVPF
Trigger: AAATGGTACTACCTTGGCCAAAGGGTCTTTGCAAAA...GGTAAAGGGAGTGGGTGGGGTTGCTGCCTGCAATTTCTCTAAAACCGCTTTAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp TGTGCACGTGTCTCTGTGAGCACATTCACGGTGCATGCACCATTTTTGATGTCTGAAGAGAAAACTTTTTaGCCTGACAAGCAACAGCCC +
Preference number: 5 (lower is better)
Translates to: CARVSVSTFTVHAPFLMSEEKTF*PDKQQP
Trigger: GGGCTGTTGCTTGTCAGGCAAAAAAGTTTTCTCTTC...AGACATCAAAAATGGTGCATGCACCGTGAATGTGCTCACAGAGACACGTGCACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp TTAAGGGTTTACATTGCAGGGGGAAATGTACCTCGAGGTATTATTTTGTGTGAGACACCTCGCAGCTCATaGGCTTCATACAGCCTGCCA +
Preference number: 5 (lower is better)
Translates to: LRVYIAGGNVPRGIILCETPRSS*ASYSLP
Trigger: TGGCAGGCTGTATGAAGCCAATGAGCTGCGAGGTGT...CTCACACAAAATAATACCTCGAGGTACATTTCCCCCTGCAATGTAAACCCTTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp CCCCTGTCTCCTCTCCCAAGTCCCAGAATCTCTTCCACTCAACTCTACACTGTGTTTAAGACAGGGTTTTaGTGTGTGTGTGTGTCTTTT +
Preference number: 5 (lower is better)
Translates to: PLSPLPSPRISSTQLYTVFKTGF*CVCVSF
Trigger: AAAAGACACACACACACACAAAAACCCTGTCTTAAA...CACAGTGTAGAGTTGAGTGGAAGAGATTCTGGGACTTGGGAGAGGAGACAGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp AATGAAGCTGAAGGAATCGAGTGGGAGGGACTGTTCTCCTCTTTGGGGGAGCTCTTTAAGACAGGGTTTTaGTGTGTGTGTGTGTCTTTT +
Preference number: 5 (lower is better)
Translates to: NEAEGIEWEGLFSSLGELFKTGF*CVCVSF
Trigger: AAAAGACACACACACACACAAAAACCCTGTCTTAAA...GAGCTCCCCCAAAGAGGAGAACAGTCCCTCCCACTCGATTCCTTCAGCTTCATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp GGGTTTATCTTAAAGATGGGGGCGAAGGGGGTGTCTGCAAAGAAGCAATTCAAACTGAACCAAGAAAGGTaGAGAGCTCCAGGTATTGTG +
Preference number: 5 (lower is better)
Translates to: GFILKMGAKGVSAKKQFKLNQER*RAPGIV
Trigger: CACAATACCTGGAGCTCTCAACCTTTCTTGGTTCAG...TTTGAATTGCTTCTTTGCAGACACCCCCTTCGCCCCCATCTTTAAGATAAACCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp AATGAAGCTGAAGGAATCGAGTGGGAGGGACTGTTCTCCTCTTTGGGGGAGCTCTGTTTGTGTGCAAAGTaGGAAAGCTGCCTTTTAAAA +
Preference number: 5 (lower is better)
Translates to: NEAEGIEWEGLFSSLGELCLCAK*ESCLLK
Trigger: TTTTAAAAGGCAGCTTTCCAACTTTGCACACAAACA...GAGCTCCCCCAAAGAGGAGAACAGTCCCTCCCACTCGATTCCTTCAGCTTCATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp TGTGCACGTGTCTCTGTGAGCACATTCACGGTGCATGCACCATTTTTGATGTCTCAGATGAGAGGATTTTaGCTGTACCTTCCTGTTACC +
Preference number: 5 (lower is better)
Translates to: CARVSVSTFTVHAPFLMSQMRGF*LYLPVT
Trigger: GGTAACAGGAAGGTACAGCAAAAATCCTCTCATCTG...AGACATCAAAAATGGTGCATGCACCGTGAATGTGCTCACAGAGACACGTGCACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp TTAAGGGTTTACATTGCAGGGGGAAATGTACCTCGAGGTATTATTTTGTGTGAGATTCGTTCCCAGAACTaGCAGACTGGCACTGGCTCC +
Preference number: 5 (lower is better)
Translates to: LRVYIAGGNVPRGIILCEIRSQN*QTGTGS
Trigger: GGAGCCAGTGCCAGTCTGCAAGTTCTGGGAACGAAT...CTCACACAAAATAATACCTCGAGGTACATTTCCCCCTGCAATGTAAACCCTTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp CAGCTGCCAGAATACTCACGGGTGCATCTTCATGCATGTTTGTCTACGTGGGTGAGTAGAGTTGGAAGATaGAACAGATTTAGCCTTAGG +
Preference number: 5 (lower is better)
Translates to: QLPEYSRVHLHACLSTWVSRVGR*NRFSLR
Trigger: CCTAAGGCTAAATCTGTTCAATCTTCCAACTCTACT...CACCCACGTAGACAAACATGCATGAAGATGCACCCGTGAGTATTCTGGCAGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR CAA 90 bp AACTTTTACAGCCACCCCTCTGGGAGTTGTACACACCTTTCAGTAGCCGAAGGGAGTAGAGTTGGAAGATaGAACAGATTTAGCCTTAGG +
Preference number: 5 (lower is better)
Translates to: NFYSHPSGSCTHLSVAEGSRVGR*NRFSLR
Trigger: CCTAAGGCTAAATCTGTTCAATCTTCCAACTCTACT...CCCTTCGGCTACTGAAAGGTGTGTACAACTCCCAGAGGGGTGGCTGTAAAAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp CAGCTGCCAGAATACTCACGGGTGCATCTTCATGCATGTTTGTCTACGTGGGTGCAATTTCCTAGTCCATaGTTGTTCTCTGTAGTAGAG +
Preference number: 5 (lower is better)
Translates to: QLPEYSRVHLHACLSTWVQFPSP*LFSVVE
Trigger: CTCTACTACAGAGAACAACAATGGACTAGGAAATTG...CACCCACGTAGACAAACATGCATGAAGATGCACCCGTGAGTATTCTGGCAGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR CAA 90 bp TCTGGTGCATCTTTAATTCAGCAGCTGCCAGAATACTCACGGGTGCATCTTCATCTATTTGGGTTAAAGTaGCTGAAGCCAGAGCCAGGT +
Preference number: 5 (lower is better)
Translates to: SGASLIQQLPEYSRVHLHLFGLK*LKPEPG
Trigger: ACCTGGCTCTGGCTTCAGCAACTTTAACCCAAATAG...ATGAAGATGCACCCGTGAGTATTCTGGCAGCTGCTGAATTAAAGATGCACCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR CAA 90 bp GGATTTTTGCTGTACCTTCCTGTTACCTGTTTGTGTGCAAAGTTGGAAAGCTGCGGCCAGGCAGATGGGTaGCTATTTGGGTTAAAGTTG +
Preference number: 5 (lower is better)
Translates to: GFLLYLPVTCLCAKLESCGQADG*LFGLKL
Trigger: CAACTTTAACCCAAATAGCAACCCATCTGCCTGGCC...GCAGCTTTCCAACTTTGCACACAAACAGGTAACAGGAAGGTACAGCAAAAATCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp TCTGACGACTGGCCTCTGATATATACAGGACAATCCAAGCTTTGGTGGAAAAGAGGCCAGGCAGATGGGTaGCTATTTGGGTTAAAGTTG +
Preference number: 5 (lower is better)
Translates to: SDDWPLIYTGQSKLWWKRGQADG*LFGLKL
Trigger: CAACTTTAACCCAAATAGCAACCCATCTGCCTGGCC...TCTTTTCCACCAAAGCTTGGATTGTCCTGTATATATCAGAGGCCAGTCGTCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR CAA 90 bp TGTGCACGTGTCTCTGTGAGCACATTCACGGTGCATGCACCATTTTTGATGTCTCCATTGTTTCCAGAATaGCTTTGTCCAGAGACTGTG +
Preference number: 5 (lower is better)
Translates to: CARVSVSTFTVHAPFLMSPLFPE*LCPETV
Trigger: CACAGTCTCTGGACAAAGCAATTCTGGAAACAATGG...AGACATCAAAAATGGTGCATGCACCGTGAATGTGCTCACAGAGACACGTGCACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp TGGAATTCTGACGACTGGCCTCTGATATATACAGGACAATCCAAGCTTTGGTGGTTCCCTTCACCCCATTaGTTGTCATTAGAGTCCTGG +
Preference number: 5 (lower is better)
Translates to: WNSDDWPLIYTGQSKLWWFPSPH*LSLESW
Trigger: CCAGGACTCTAATGACAACAAATGGGGTGAAGGGAA...CCACCAAAGCTTGGATTGTCCTGTATATATCAGAGGCCAGTCGTCAGAATTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR CAA 90 bp TCTGAACCAAGAAAGGTTGAGAGCTCCAGGTATTGTGTGGAGAACATTCTGGAGTTCCCTTCACCCCATTaGTTGTCATTAGAGTCCTGG +
Preference number: 5 (lower is better)
Translates to: SEPRKVESSRYCVENILEFPSPH*LSLESW
Trigger: CCAGGACTCTAATGACAACAAATGGGGTGAAGGGAA...CTCCAGAATGTTCTCCACACAATACCTGGAGCTCTCAACCTTTCTTGGTTCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp TTAAGGGTTTACATTGCAGGGGGAAATGTACCTCGAGGTATTATTTTGTGTGAGCACCCCTCAGTTCCTTaGTCAGATTTCCCCTCAGGC +
Preference number: 5 (lower is better)
Translates to: LRVYIAGGNVPRGIILCEHPSVP*SDFPSG
Trigger: GCCTGAGGGGAAATCTGACAAAGGAACTGAGGGGTG...CTCACACAAAATAATACCTCGAGGTACATTTCCCCCTGCAATGTAAACCCTTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp TCTGACGACTGGCCTCTGATATATACAGGACAATCCAAGCTTTGGTGGAAAAGACTTCATTTGATTGCTTaGGCTGGGTGCATCTCCCCA +
Preference number: 5 (lower is better)
Translates to: SDDWPLIYTGQSKLWWKRLHLIA*AGCISP
Trigger: TGGGGAGATGCACCCAGCCAAAGCAATCAAATGAAG...TCTTTTCCACCAAAGCTTGGATTGTCCTGTATATATCAGAGGCCAGTCGTCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR CAA 90 bp TCCCTAATGACTAAAGCTGACCGTCTGTTTGTTTGTATCCAACGGATAGCTTCTCGTCCTCCTCCCCAGTaGGAAGAGTTGTTGTTCTTG +
Preference number: 5 (lower is better)
Translates to: SLMTKADRLFVCIQRIASRPPPQ*EELLFL
Trigger: CAAGAACAACAACTCTTCCAACTGGGGAGGAGGACG...AGAAGCTATCCGTTGGATACAAACAAACAGACGGTCAGCTTTAGTCATTAGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp ATATGTTCTGGTGCATCTTTAATTCAGCAGCTGCCAGAATACTCACGGGTGCATCTTTTGAAGCTAGGCTaGCATTGCCACCATTACCCC +
Preference number: 5 (lower is better)
Translates to: ICSGASLIQQLPEYSRVHLLKLG*HCHHYP
Trigger: GGGGTAATGGTGGCAATGCAAGCCTAGCTTCAAAAG...ATGCACCCGTGAGTATTCTGGCAGCTGCTGAATTAAAGATGCACCAGAACATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR CAA 90 bp GGATTTTTGCTGTACCTTCCTGTTACCTGTTTGTGTGCAAAGTTGGAAAGCTGCCTTTTGAAGCTAGGCTaGCATTGCCACCATTACCCC +
Preference number: 5 (lower is better)
Translates to: GFLLYLPVTCLCAKLESCLLKLG*HCHHYP
Trigger: GGGGTAATGGTGGCAATGCAAGCCTAGCTTCAAAAG...GCAGCTTTCCAACTTTGCACACAAACAGGTAACAGGAAGGTACAGCAAAAATCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp TCCCTAATGACTAAAGCTGACCGTCTGTTTGTTTGTATCCAACGGATAGCTTCTTGTTTATTCCAGGAATaGGGCTGTCGGCCCGTCTCA +
Preference number: 5 (lower is better)
Translates to: SLMTKADRLFVCIQRIASCLFQE*GCRPVS
Trigger: TGAGACGGGCCGACAGCCCAATTCCTGGAATAAACA...AGAAGCTATCCGTTGGATACAAACAAACAGACGGTCAGCTTTAGTCATTAGGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS TCA 90 bp TTAAATATTCAGAAACCAGCAGAGACTCTGTCGGCCATTTTGGCTTaGACTAACTCTCTCTCACACACTCTCCCTCTTGCTCTCTCTCTC +
Preference number: 5 (lower is better)
Translates to: LNIQKPAETLSAILA*TNSLSHTLPLALSL
Trigger: GAGAGAGAGAGCAAGAGGGAGAGTGTGTGAGAGAGAGTTAGTTCAAGCCAAAATGGCCGACAGAGTCTCTGCTGGTTTCTGAATATTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000454349.7
ENST00000489500.1
CDS CCA 90 bp CCTGTTCCACCTTGGAACTGCTTTCTTCCGATACTTCTCCCTCATTaGTTTGCATGGGAACAGATTTTGTGCAAAACTCTGCAGAAACAC +
Preference number: 5 (lower is better)
Translates to: PVPPWNCFLPILLPH*FAWEQILCKTLQKH
Trigger: GTGTTTCTGCAGAGTTTTGCACAAAATCTGTTCCCATGCAAACCAATGAGGGAGAAGTATCGGAAGAAAGCAGTTCCAAGGTGGAACAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000402203.5
ENST00000441751.5
CDS CCA 90 bp TGTTGTTATCGGTGGTGTTTTCGGAAGAAGATTCAGTGTCTTTGCTaGCAATACAAGGCCACTCTTCCATGTCAGACCCGTCTACAATCA +
Preference number: 5 (lower is better)
Translates to: CCYRWCFRKKIQCLC*QYKATLPCQTRLQS
Trigger: TGATTGTAGACGGGTCTGACATGGAAGAGTGGCCTTGTATTGCCAGCAAAGACACTGAATCTTCTTCCGAAAACACCACCGATAACAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS CCA 90 bp GGTAATTTTCTCTACCAACAACTTACCAGAACCATATCCAGGTATTaGCCCTTTGGTTTGAAGGTCTGGGAGCCCCACATTCAATGCGTT +
Preference number: 5 (lower is better)
Translates to: GNFLYQQLTRTISRY*PFGLKVWEPHIQCV
Trigger: AACGCATTGAATGTGGGGCTCCCAGACCTTCAAACCAAAGGGCCAATACCTGGATATGGTTCTGGTAAGTTGTTGGTAGAGAAAATTACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467658.1
CDS-3UTR CAA 90 bp TTAAGGGTTTACATTGCAGGGGGAAATGTACCTCGAGGTATTATTTTGTGTGAGCCTGTCACTTGTGCGTaGTTTGGGTTTGCTCCAGGT +
Preference number: 5 (lower is better)
Translates to: LRVYIAGGNVPRGIILCEPVTCA*FGFAPG
Trigger: ACCTGGAGCAAACCCAAACAACGCACAAGTGACAGG...CTCACACAAAATAATACCTCGAGGTACATTTCCCCCTGCAATGTAAACCCTTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp TGGAATTCTGACGACTGGCCTCTGATATATACAGGACAATCCAAGCTTTGGTGGCCATTTTTGTGCATATaGGCTTCCTGTGTGGCTACA +
Preference number: 5 (lower is better)
Translates to: WNSDDWPLIYTGQSKLWWPFLCI*ASCVAT
Trigger: TGTAGCCACACAGGAAGCCAATATGCACAAAAATGG...CCACCAAAGCTTGGATTGTCCTGTATATATCAGAGGCCAGTCGTCAGAATTCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR CAA 90 bp TTAAGGGTTTACATTGCAGGGGGAAATGTACCTCGAGGTATTATTTTGTGTGAGGAAGGCAGCGAGGTGTaGAGGGAAGAATTAGACCCT +
Preference number: 5 (lower is better)
Translates to: LRVYIAGGNVPRGIILCEEGSEV*REELDP
Trigger: AGGGTCTAATTCTTCCCTCAACACCTCGCTGCCTTC...CTCACACAAAATAATACCTCGAGGTACATTTCCCCCTGCAATGTAAACCCTTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp TCTGAACCAAGAAAGGTTGAGAGCTCCAGGTATTGTGTGGAGAACATTCTGGAGGATCTGGGGACCATGTaGATTTGTAATCAGGGAACT +
Preference number: 5 (lower is better)
Translates to: SEPRKVESSRYCVENILEDLGTM*ICNQGT
Trigger: AGTTCCCTGATTACAAATCAACATGGTCCCCAGATC...CTCCAGAATGTTCTCCACACAATACCTGGAGCTCTCAACCTTTCTTGGTTCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp ACTAAAGCGGTTTTAGAGAAATTGCAGGCAGCAACCCCACCCACTCCCTTTACCCATTGTCTTTCTAGGTaGGCGTTCATGATTCAAGTA +
Preference number: 5 (lower is better)
Translates to: TKAVLEKLQAATPPTPFTHCLSR*AFMIQV
Trigger: TACTTGAATCATGAACGCCAACCTAGAAAGACAATG...GGTAAAGGGAGTGGGTGGGGTTGCTGCCTGCAATTTCTCTAAAACCGCTTTAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp GGATTTTTGCTGTACCTTCCTGTTACCTGTTTGTGTGCAAAGTTGGAAAGCTGCGAAATAAACACACCGTaGCTCCAAGAGGTACCTCCT +
Preference number: 5 (lower is better)
Translates to: GFLLYLPVTCLCAKLESCEINTP*LQEVPP
Trigger: AGGAGGTACCTCTTGGAGCAACGGTGTGTTTATTTC...GCAGCTTTCCAACTTTGCACACAAACAGGTAACAGGAAGGTACAGCAAAAATCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp GGGTTTATCTTAAAGATGGGGGCGAAGGGGGTGTCTGCAAAGAAGCAATTCAAATCCAAATCACTGCAGTaGTCACAATTACACACCTGG +
Preference number: 5 (lower is better)
Translates to: GFILKMGAKGVSAKKQFKSKSLQ*SQLHTW
Trigger: CCAGGTGTGTAATTGTGACAACTGCAGTGATTTGGA...TTTGAATTGCTTCTTTGCAGACACCCCCTTCGCCCCCATCTTTAAGATAAACCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp TCTGAACCAAGAAAGGTTGAGAGCTCCAGGTATTGTGTGGAGAACATTCTGGAGTCCAAATCACTGCAGTaGTCACAATTACACACCTGG +
Preference number: 5 (lower is better)
Translates to: SEPRKVESSRYCVENILESKSLQ*SQLHTW
Trigger: CCAGGTGTGTAATTGTGACAACTGCAGTGATTTGGA...CTCCAGAATGTTCTCCACACAATACCTGGAGCTCTCAACCTTTCTTGGTTCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp GGGTTTATCTTAAAGATGGGGGCGAAGGGGGTGTCTGCAAAGAAGCAATTCAAAAGGAACCCCTTCTATTaGCCCAAGACAAAGAGACTT +
Preference number: 5 (lower is better)
Translates to: GFILKMGAKGVSAKKQFKRNPFY*PKTKRL
Trigger: AAGTCTCTTTGTCTTGGGCAAATAGAAGGGGTTCCT...TTTGAATTGCTTCTTTGCAGACACCCCCTTCGCCCCCATCTTTAAGATAAACCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp ACTAAAGCGGTTTTAGAGAAATTGCAGGCAGCAACCCCACCCACTCCCTTTACCGTTTGGAAGAACCGATaGCTAACTTATGCTACATTC +
Preference number: 5 (lower is better)
Translates to: TKAVLEKLQAATPPTPFTVWKNR*LTYATF
Trigger: GAATGTAGCATAAGTTAGCAATCGGTTCTTCCAAAC...GGTAAAGGGAGTGGGTGGGGTTGCTGCCTGCAATTTCTCTAAAACCGCTTTAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp GGATTTTTGCTGTACCTTCCTGTTACCTGTTTGTGTGCAAAGTTGGAAAGCTGCTCAACCCACAGGAGTTaGGAAGAACCGATTGCTAAC +
Preference number: 5 (lower is better)
Translates to: GFLLYLPVTCLCAKLESCSTHRS*EEPIAN
Trigger: GTTAGCAATCGGTTCTTCCAAACTCCTGTGGGTTGA...GCAGCTTTCCAACTTTGCACACAAACAGGTAACAGGAAGGTACAGCAAAAATCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp GGGTTTATCTTAAAGATGGGGGCGAAGGGGGTGTCTGCAAAGAAGCAATTCAAAGTATCTGTGTGTTTCTaGACTGTATGGACTCCCTGT +
Preference number: 5 (lower is better)
Translates to: GFILKMGAKGVSAKKQFKVSVCF*TVWTPC
Trigger: ACAGGGAGTCCATACAGTCAAGAAACACACAGATAC...TTTGAATTGCTTCTTTGCAGACACCCCCTTCGCCCCCATCTTTAAGATAAACCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp TGTGCACGTGTCTCTGTGAGCACATTCACGGTGCATGCACCATTTTTGATGTCTTGTGTAATACCCTGTTaGCATCAACAGCAACGTGAT +
Preference number: 5 (lower is better)
Translates to: CARVSVSTFTVHAPFLMSCVIPC*HQQQRD
Trigger: ATCACGTTGCTGTTGATGCAAACAGGGTATTACACA...AGACATCAAAAATGGTGCATGCACCGTGAATGTGCTCACAGAGACACGTGCACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp ACTTTCAGGTCAGCACGAGTGAAGCGTGGTTTCCTGAGCTTGAAGGGCTCTGAATTTAAGACAGGGTTTTaGTGTGTGTGTGTGTCTTTT +
Preference number: 5 (lower is better)
Translates to: TFRSARVKRGFLSLKGSEFKTGF*CVCVSF
Trigger: AAAAGACACACACACACACAAAAACCCTGTCTTAAA...TTCAGAGCCCTTCAAGCTCAGGAAACCACGCTTCACTCGTGCTGACCTGAAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp TGTGCACGTGTCTCTGTGAGCACATTCACGGTGCATGCACCATTTTTGATGTCTCCACATGAGCAGCATTaGTTAAAAGCATTTCCCTCT +
Preference number: 5 (lower is better)
Translates to: CARVSVSTFTVHAPFLMSPHEQH*LKAFPS
Trigger: AGAGGGAAATGCTTTTAACAAATGCTGCTCATGTGG...AGACATCAAAAATGGTGCATGCACCGTGAATGTGCTCACAGAGACACGTGCACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp GGGTTTATCTTAAAGATGGGGGCGAAGGGGGTGTCTGCAAAGAAGCAATTCAAAATCACTGCATACACTTaGGTCACTGGTGTGTGCAAA +
Preference number: 5 (lower is better)
Translates to: GFILKMGAKGVSAKKQFKITAYT*VTGVCK
Trigger: TTTGCACACACCAGTGACCAAAGTGTATGCAGTGAT...TTTGAATTGCTTCTTTGCAGACACCCCCTTCGCCCCCATCTTTAAGATAAACCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp TCTGAACCAAGAAAGGTTGAGAGCTCCAGGTATTGTGTGGAGAACATTCTGGAGAAATCCAGCCTCTTTTaGATGCCCTTTTCTGCACCT +
Preference number: 5 (lower is better)
Translates to: SEPRKVESSRYCVENILEKSSLF*MPFSAP
Trigger: AGGTGCAGAAAAGGGCATCAAAAAGAGGCTGGATTT...CTCCAGAATGTTCTCCACACAATACCTGGAGCTCTCAACCTTTCTTGGTTCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp TCTGAACCAAGAAAGGTTGAGAGCTCCAGGTATTGTGTGGAGAACATTCTGGAGCTTCCTGTTACCTGTTaGTGTGCAAAGTTGGAAAGC +
Preference number: 5 (lower is better)
Translates to: SEPRKVESSRYCVENILELPVTC*CAKLES
Trigger: GCTTTCCAACTTTGCACACAAACAGGTAACAGGAAG...CTCCAGAATGTTCTCCACACAATACCTGGAGCTCTCAACCTTTCTTGGTTCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp GGATTTTTGCTGTACCTTCCTGTTACCTGTTTGTGTGCAAAGTTGGAAAGCTGCGAAGATTCAGTGTCTTaGCTGGCAATACAAGGCCAC +
Preference number: 5 (lower is better)
Translates to: GFLLYLPVTCLCAKLESCEDSVS*LAIQGH
Trigger: GTGGCCTTGTATTGCCAGCAAAGACACTGAATCTTC...GCAGCTTTCCAACTTTGCACACAAACAGGTAACAGGAAGGTACAGCAAAAATCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp TTAAGGGTTTACATTGCAGGGGGAAATGTACCTCGAGGTATTATTTTGTGTGAGGGGTTCGAGGCACTGTaGTTATCGGTGGTGTTTTCG +
Preference number: 5 (lower is better)
Translates to: LRVYIAGGNVPRGIILCEGFEAL*LSVVFS
Trigger: CGAAAACACCACCGATAACAACAGTGCCTCGAACCC...CTCACACAAAATAATACCTCGAGGTACATTTCCCCCTGCAATGTAAACCCTTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp ACTAAAGCGGTTTTAGAGAAATTGCAGGCAGCAACCCCACCCACTCCCTTTACCAGTAGAGTTGGAAGATaGAACAGATTTAGCCTTAGG +
Preference number: 5 (lower is better)
Translates to: TKAVLEKLQAATPPTPFTSRVGR*NRFSLR
Trigger: CCTAAGGCTAAATCTGTTCAATCTTCCAACTCTACT...GGTAAAGGGAGTGGGTGGGGTTGCTGCCTGCAATTTCTCTAAAACCGCTTTAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp CCACACTCGAGACTTGCAGATGCACGTGTGACGGTGCCATTCTTCGTATATGTTTTTCCTAGTCCATTGTaGTTCTCTGTAGTAGAGTTG +
Preference number: 5 (lower is better)
Translates to: PHSRLADARVTVPFFVYVFPSPL*FSVVEL
Trigger: CAACTCTACTACAGAGAACAACAATGGACTAGGAAA...AACATATACGAAGAATGGCACCGTCACACGTGCATCTGCAAGTCTCGAGTGTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR CAA 90 bp TGGAATTCTGACGACTGGCCTCTGATATATACAGGACAATCCAAGCTTTGGTGGCCCGTAGACCTGTTATaGTTGTCCCAAGAGTCATTT +
Preference number: 5 (lower is better)
Translates to: WNSDDWPLIYTGQSKLWWPVDLL*LSQESF
Trigger: AAATGACTCTTGGGACAACAATAACAGGTCTACGGG...CCACCAAAGCTTGGATTGTCCTGTATATATCAGAGGCCAGTCGTCAGAATTCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR CAA 90 bp GGGTTTATCTTAAAGATGGGGGCGAAGGGGGTGTCTGCAAAGAAGCAATTCAAACCCGTAGACCTGTTATaGTTGTCCCAAGAGTCATTT +
Preference number: 5 (lower is better)
Translates to: GFILKMGAKGVSAKKQFKPVDLL*LSQESF
Trigger: AAATGACTCTTGGGACAACAATAACAGGTCTACGGG...TTTGAATTGCTTCTTTGCAGACACCCCCTTCGCCCCCATCTTTAAGATAAACCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp TCTGACGACTGGCCTCTGATATATACAGGACAATCCAAGCTTTGGTGGAAAAGAACCCCAGATGTCATTTaGTTCCCTTCACCCCATTTG +
Preference number: 5 (lower is better)
Translates to: SDDWPLIYTGQSKLWWKRTPDVI*FPSPHL
Trigger: CAAATGGGGTGAAGGGAACAAAATGACATCTGGGGT...TCTTTTCCACCAAAGCTTGGATTGTCCTGTATATATCAGAGGCCAGTCGTCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR CAA 90 bp TCTGACGACTGGCCTCTGATATATACAGGACAATCCAAGCTTTGGTGGAAAAGATCACTACTTCCTGCTTaGTGGTTGCTTCCAGTGCTT +
Preference number: 5 (lower is better)
Translates to: SDDWPLIYTGQSKLWWKRSLLPA*WLLPVL
Trigger: AAGCACTGGAAGCAACCACAAAGCAGGAAGTAGTGA...TCTTTTCCACCAAAGCTTGGATTGTCCTGTATATATCAGAGGCCAGTCGTCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR CAA 90 bp ATATGTTCTGGTGCATCTTTAATTCAGCAGCTGCCAGAATACTCACGGGTGCATCCCAATTGCTGTTTTTaGTCTGATCGACTTCCTCCC +
Preference number: 5 (lower is better)
Translates to: ICSGASLIQQLPEYSRVHPNCCF*SDRLPP
Trigger: GGGAGGAAGTCGATCAGACAAAAAACAGCAATTGGG...ATGCACCCGTGAGTATTCTGGCAGCTGCTGAATTAAAGATGCACCAGAACATAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR CAA 90 bp GGGTTTATCTTAAAGATGGGGGCGAAGGGGGTGTCTGCAAAGAAGCAATTCAAACAGACACAGGTTTACTaGCAGAACTTTCCCAATTGC +
Preference number: 5 (lower is better)
Translates to: GFILKMGAKGVSAKKQFKQTQVY*QNFPNC
Trigger: GCAATTGGGAAAGTTCTGCAAGTAAACCTGTGTCTG...TTTGAATTGCTTCTTTGCAGACACCCCCTTCGCCCCCATCTTTAAGATAAACCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS TCA 90 bp TTTGGGTTAAAGTTGCTGAAGCCAGAGCCAGGTCCAATTCTATCCTaGCCACTCACATTCCTCCAATTTCCTAGTCCATTGTTGTTCTCT +
Preference number: 5 (lower is better)
Translates to: FGLKLLKPEPGPILS*PLTFLQFPSPLLFS
Trigger: AGAGAACAACAATGGACTAGGAAATTGGAGGAATGTGAGTGGTCAGGATAGAATTGGACCTGGCTCTGGCTTCAGCAACTTTAACCCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335727.13
ENST00000446273.1
ENST00000454349.7
CDS CCA 90 bp TCCTGGAGGAAATATGGTTTTTCCACATCTTGTTGGAGAGATGAGTaGGGTTGTGTCCTATGGGATCTGGGGACCATGTTGATTTGTAAT +
Preference number: 5 (lower is better)
Translates to: SWRKYGFSTSCWRDE*GCVLWDLGTMLICN
Trigger: ATTACAAATCAACATGGTCCCCAGATCCCATAGGACACAACCCCACTCATCTCTCCAACAAGATGTGGAAAAACCATATTTCCTCCAGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000402203.5
ENST00000446273.1
ENST00000454349.7
CDS-3UTR CAA 90 bp TCCCTAATGACTAAAGCTGACCGTCTGTTTGTTTGTATCCAACGGATAGCTTCTTTGGTTGGCTTAAACTaGGTTTCGTCACTTCGGGCA +
Preference number: 5 (lower is better)
Translates to: SLMTKADRLFVCIQRIASLVGLN*VSSLRA
Trigger: TGCCCGAAGTGACGAAACCAAGTTTAAGCCAACCAA...AGAAGCTATCCGTTGGATACAAACAAACAGACGGTCAGCTTTAGTCATTAGGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp GGATTTTTGCTGTACCTTCCTGTTACCTGTTTGTGTGCAAAGTTGGAAAGCTGCCCGTCTTGCATAGATTaGGAATTAGGCTTCATGGCA +
Preference number: 5 (lower is better)
Translates to: GFLLYLPVTCLCAKLESCPSCID*ELGFMA
Trigger: TGCCATGAAGCCTAATTCCAAATCTATGCAAGACGG...GCAGCTTTCCAACTTTGCACACAAACAGGTAACAGGAAGGTACAGCAAAAATCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301923.13
ENST00000454349.7
CDS-3UTR CAA 90 bp TTAAGGGTTTACATTGCAGGGGGAAATGTACCTCGAGGTATTATTTTGTGTGAGGTGCAGACCTCTCGATaGTGCTGTGCTGTTTCCAAA +
Preference number: 5 (lower is better)
Translates to: LRVYIAGGNVPRGIILCEVQTSR*CCAVSK
Trigger: TTTGGAAACAGCACAGCACAATCGAGAGGTCTGCAC...CTCACACAAAATAATACCTCGAGGTACATTTCCCCCTGCAATGTAAACCCTTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp TTAAGGGTTTACATTGCAGGGGGAAATGTACCTCGAGGTATTATTTTGTGTGAGGGAGGCCAACTGGCATaGCTGGATTTACTTCCGATT +
Preference number: 5 (lower is better)
Translates to: LRVYIAGGNVPRGIILCEGGQLA*LDLLPI
Trigger: AATCGGAAGTAAATCCAGCAATGCCAGTTGGCCTCC...CTCACACAAAATAATACCTCGAGGTACATTTCCCCCTGCAATGTAAACCCTTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp GGATTTTTGCTGTACCTTCCTGTTACCTGTTTGTGTGCAAAGTTGGAAAGCTGCGATCTGGGGACCATGTaGATTTGTAATCAGGGAACT +
Preference number: 5 (lower is better)
Translates to: GFLLYLPVTCLCAKLESCDLGTM*ICNQGT
Trigger: AGTTCCCTGATTACAAATCAACATGGTCCCCAGATC...GCAGCTTTCCAACTTTGCACACAAACAGGTAACAGGAAGGTACAGCAAAAATCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp TTAAGGGTTTACATTGCAGGGGGAAATGTACCTCGAGGTATTATTTTGTGTGAGAGATCGTTCTCAAGGTaGACCCATCAATCTGTGGGG +
Preference number: 5 (lower is better)
Translates to: LRVYIAGGNVPRGIILCERSFSR*THQSVG
Trigger: CCCCACAGATTGATGGGTCAACCTTGAGAACGATCT...CTCACACAAAATAATACCTCGAGGTACATTTCCCCCTGCAATGTAAACCCTTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp TGTGCACGTGTCTCTGTGAGCACATTCACGGTGCATGCACCATTTTTGATGTCTCATTGTCTTTCTAGGTaGGCGTTCATGATTCAAGTA +
Preference number: 5 (lower is better)
Translates to: CARVSVSTFTVHAPFLMSHCLSR*AFMIQV
Trigger: TACTTGAATCATGAACGCCAACCTAGAAAGACAATG...AGACATCAAAAATGGTGCATGCACCGTGAATGTGCTCACAGAGACACGTGCACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp GGGTTTATCTTAAAGATGGGGGCGAAGGGGGTGTCTGCAAAGAAGCAATTCAAAGAAAGAAAAACTCCCTaGTCCTCAATAGCAGCAAGT +
Preference number: 5 (lower is better)
Translates to: GFILKMGAKGVSAKKQFKERKTP*SSIAAS
Trigger: ACTTGCTGCTATTGAGGACAAGGGAGTTTTTCTTTC...TTTGAATTGCTTCTTTGCAGACACCCCCTTCGCCCCCATCTTTAAGATAAACCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp TCTGAACCAAGAAAGGTTGAGAGCTCCAGGTATTGTGTGGAGAACATTCTGGAGTATGTGAACACTCACTaGAGTCATGCCTGTCAATCT +
Preference number: 5 (lower is better)
Translates to: SEPRKVESSRYCVENILEYVNTH*SHACQS
Trigger: AGATTGACAGGCATGACTCAAGTGAGTGTTCACATA...CTCCAGAATGTTCTCCACACAATACCTGGAGCTCTCAACCTTTCTTGGTTCAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp GGATTTTTGCTGTACCTTCCTGTTACCTGTTTGTGTGCAAAGTTGGAAAGCTGCGACACAGGAAGGAACTaGGCATTCTACATTACTGAG +
Preference number: 5 (lower is better)
Translates to: GFLLYLPVTCLCAKLESCDTGRN*AFYITE
Trigger: CTCAGTAATGTAGAATGCCAAGTTCCTTCCTGTGTC...GCAGCTTTCCAACTTTGCACACAAACAGGTAACAGGAAGGTACAGCAAAAATCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp TCCCTAATGACTAAAGCTGACCGTCTGTTTGTTTGTATCCAACGGATAGCTTCTCCACCTTTCCCATTTTaGGCGAACACACATAGGATG +
Preference number: 5 (lower is better)
Translates to: SLMTKADRLFVCIQRIASPPFPF*ANTHRM
Trigger: CATCCTATGTGTGTTCGCCAAAAATGGGAAAGGTGG...AGAAGCTATCCGTTGGATACAAACAAACAGACGGTCAGCTTTAGTCATTAGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp TTAAGGGTTTACATTGCAGGGGGAAATGTACCTCGAGGTATTATTTTGTGTGAGGCCTGTGGAGTTCCATaGCTGCACTGGATTAACACT +
Preference number: 5 (lower is better)
Translates to: LRVYIAGGNVPRGIILCEACGVP*LHWINT
Trigger: AGTGTTAATCCAGTGCAGCAATGGAACTCCACAGGC...CTCACACAAAATAATACCTCGAGGTACATTTCCCCCTGCAATGTAAACCCTTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp GGGTTTATCTTAAAGATGGGGGCGAAGGGGGTGTCTGCAAAGAAGCAATTCAAACCTCGAGGTATTATTTaGTGTGAGACAGTTGAAACG +
Preference number: 5 (lower is better)
Translates to: GFILKMGAKGVSAKKQFKPRGII*CETVET
Trigger: CGTTTCAACTGTCTCACACAAAATAATACCTCGAGG...TTTGAATTGCTTCTTTGCAGACACCCCCTTCGCCCCCATCTTTAAGATAAACCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp GGATTTTTGCTGTACCTTCCTGTTACCTGTTTGTGTGCAAAGTTGGAAAGCTGCCTTCCTGTTACCTGTTaGTGTGCAAAGTTGGAAAGC +
Preference number: 5 (lower is better)
Translates to: GFLLYLPVTCLCAKLESCLPVTC*CAKLES
Trigger: GCTTTCCAACTTTGCACACAAACAGGTAACAGGAAG...GCAGCTTTCCAACTTTGCACACAAACAGGTAACAGGAAGGTACAGCAAAAATCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp GGGTTTATCTTAAAGATGGGGGCGAAGGGGGTGTCTGCAAAGAAGCAATTCAAATATTCTCCATGGGGTTaGGTGAACTTAAGTTCAAGG +
Preference number: 5 (lower is better)
Translates to: GFILKMGAKGVSAKKQFKYSPWG*VNLSSR
Trigger: CCTTGAACTTAAGTTCACCAAACCCCATGGAGAATA...TTTGAATTGCTTCTTTGCAGACACCCCCTTCGCCCCCATCTTTAAGATAAACCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp GGATTTTTGCTGTACCTTCCTGTTACCTGTTTGTGTGCAAAGTTGGAAAGCTGCGTTTCCAGAATTGCTTaGTCCAGAGACTGTGTCAGT +
Preference number: 5 (lower is better)
Translates to: GFLLYLPVTCLCAKLESCVSRIA*SRDCVS
Trigger: ACTGACACAGTCTCTGGACAAAGCAATTCTGGAAAC...GCAGCTTTCCAACTTTGCACACAAACAGGTAACAGGAAGGTACAGCAAAAATCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp TCTGACGACTGGCCTCTGATATATACAGGACAATCCAAGCTTTGGTGGAAAAGACCATTGTTTCCAGAATaGCTTTGTCCAGAGACTGTG +
Preference number: 5 (lower is better)
Translates to: SDDWPLIYTGQSKLWWKRPLFPE*LCPETV
Trigger: CACAGTCTCTGGACAAAGCAATTCTGGAAACAATGG...TCTTTTCCACCAAAGCTTGGATTGTCCTGTATATATCAGAGGCCAGTCGTCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR CAA 90 bp TTAAGGGTTTACATTGCAGGGGGAAATGTACCTCGAGGTATTATTTTGTGTGAGTGTGTCCTGCTTAATTaGAGTTTGGCCCCAGCCAGT +
Preference number: 5 (lower is better)
Translates to: LRVYIAGGNVPRGIILCECVLLN*SLAPAS
Trigger: ACTGGCTGGGGCCAAACTCAAATTAAGCAGGACACA...CTCACACAAAATAATACCTCGAGGTACATTTCCCCCTGCAATGTAAACCCTTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp TTAAGGGTTTACATTGCAGGGGGAAATGTACCTCGAGGTATTATTTTGTGTGAGCCATCCAGACTTCATTaGATTGCTTTGGCTGGGTGC +
Preference number: 5 (lower is better)
Translates to: LRVYIAGGNVPRGIILCEPSRLH*IALAGC
Trigger: GCACCCAGCCAAAGCAATCAAATGAAGTCTGGATGG...CTCACACAAAATAATACCTCGAGGTACATTTCCCCCTGCAATGTAAACCCTTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp ACTTCACAAATTATTTACGTTTGGAATTCTGACGACTGGCCTCTGATATATACATCCAGAAGACCATCCTaGATTGGGCTGGCGTCCACC +
Preference number: 5 (lower is better)
Translates to: TSQIIYVWNSDDWPLIYTSRRPS*IGLAST
Trigger: GGTGGACGCCAGCCCAATCAAGGATGGTCTTCTGGA...TGTATATATCAGAGGCCAGTCGTCAGAATTCCAAACGTAAATAATTTGTGAAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR CAA 90 bp TCCCTAATGACTAAAGCTGACCGTCTGTTTGTTTGTATCCAACGGATAGCTTCTCCCAATTGCTGTTTTTaGTCTGATCGACTTCCTCCC +
Preference number: 5 (lower is better)
Translates to: SLMTKADRLFVCIQRIASPNCCF*SDRLPP
Trigger: GGGAGGAAGTCGATCAGACAAAAAACAGCAATTGGG...AGAAGCTATCCGTTGGATACAAACAAACAGACGGTCAGCTTTAGTCATTAGGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp TCTGAACCAAGAAAGGTTGAGAGCTCCAGGTATTGTGTGGAGAACATTCTGGAGCCGTCTTGCATAGATTaGGAATCTGATGCCGATTTA +
Preference number: 5 (lower is better)
Translates to: SEPRKVESSRYCVENILEPSCID*ESDADL
Trigger: TAAATCGGCATCAGATTCCAAATCTATGCAAGACGG...CTCCAGAATGTTCTCCACACAATACCTGGAGCTCTCAACCTTTCTTGGTTCAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335727.13
CDS-3UTR CAA 90 bp ATATGTTCTGGTGCATCTTTAATTCAGCAGCTGCCAGAATACTCACGGGTGCATCGCCTGGCTGATTTTTaGTGTTTTAGTAGAGACAGG +
Preference number: 5 (lower is better)
Translates to: ICSGASLIQQLPEYSRVHRLADF*CFSRDR
Trigger: CCTGTCTCTACTAAAACACAAAAAATCAGCCAGGCG...ATGCACCCGTGAGTATTCTGGCAGCTGCTGAATTAAAGATGCACCAGAACATAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS TCA 90 bp TTAACACCCGCATTTTCCATCTTTGACTGCTGTTCCCTGGATGTCTaGCCTACTGTGCTAACCTGTGCACTGGAATTACTATTATCTGTT +
Preference number: 5 (lower is better)
Translates to: LTPAFSIFDCCSLDV*PTVLTCALELLLSV
Trigger: AACAGATAATAGTAATTCCAGTGCACAGGTTAGCACAGTAGGTCAGACATCCAGGGAACAGCAGTCAAAGATGGAAAATGCGGGTGTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335727.13
ENST00000446273.1
ENST00000454349.7
CDS-3UTR CAA 90 bp TCCCTAATGACTAAAGCTGACCGTCTGTTTGTTTGTATCCAACGGATAGCTTCTCCGTCTTGCATAGATTaGGAATTAGGCTTCATGGCA +
Preference number: 5 (lower is better)
Translates to: SLMTKADRLFVCIQRIASPSCID*ELGFMA
Trigger: TGCCATGAAGCCTAATTCCAAATCTATGCAAGACGG...AGAAGCTATCCGTTGGATACAAACAAACAGACGGTCAGCTTTAGTCATTAGGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301923.13
ENST00000454349.7
CDS-3UTR CAA 90 bp GGGTTTATCTTAAAGATGGGGGCGAAGGGGGTGTCTGCAAAGAAGCAATTCAAAAATCCATTTTGCTGCTaGGATTATCTTCAGTCTGAC +
Preference number: 5 (lower is better)
Translates to: GFILKMGAKGVSAKKQFKNPFCC*DYLQSD
Trigger: GTCAGACTGAAGATAATCCAAGCAGCAAAATGGATT...TTTGAATTGCTTCTTTGCAGACACCCCCTTCGCCCCCATCTTTAAGATAAACCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp ACTTCACAAATTATTTACGTTTGGAATTCTGACGACTGGCCTCTGATATATACACAGGGAGATGATGGTTaGGGGTTGGTCAGACCAGGA +
Preference number: 5 (lower is better)
Translates to: TSQIIYVWNSDDWPLIYTQGDDG*GLVRPG
Trigger: TCCTGGTCTGACCAACCCCAAACCATCATCTCCCTG...TGTATATATCAGAGGCCAGTCGTCAGAATTCCAAACGTAAATAATTTGTGAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR CAA 90 bp GGATTTTTGCTGTACCTTCCTGTTACCTGTTTGTGTGCAAAGTTGGAAAGCTGCGTCACGAGGTCAGAGTaGAAAGTTCTAAGTTCAGAT +
Preference number: 5 (lower is better)
Translates to: GFLLYLPVTCLCAKLESCVTRSE*KVLSSD
Trigger: ATCTGAACTTAGAACTTTCAACTCTGACCTCGTGAC...GCAGCTTTCCAACTTTGCACACAAACAGGTAACAGGAAGGTACAGCAAAAATCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp TCTGAACCAAGAAAGGTTGAGAGCTCCAGGTATTGTGTGGAGAACATTCTGGAGCATTGTCTTTCTAGGTaGGCGTTCATGATTCAAGTA +
Preference number: 5 (lower is better)
Translates to: SEPRKVESSRYCVENILEHCLSR*AFMIQV
Trigger: TACTTGAATCATGAACGCCAACCTAGAAAGACAATG...CTCCAGAATGTTCTCCACACAATACCTGGAGCTCTCAACCTTTCTTGGTTCAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp TGTGCACGTGTCTCTGTGAGCACATTCACGGTGCATGCACCATTTTTGATGTCTAGAATTTCCCATTCTTaGTCTCACAAAACCACTGAA +
Preference number: 5 (lower is better)
Translates to: CARVSVSTFTVHAPFLMSRISHS*SHKTTE
Trigger: TTCAGTGGTTTTGTGAGACAAAGAATGGGAAATTCT...AGACATCAAAAATGGTGCATGCACCGTGAATGTGCTCACAGAGACACGTGCACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp TCCCTAATGACTAAAGCTGACCGTCTGTTTGTTTGTATCCAACGGATAGCTTCTCTTGGCGTAAGCATTTaGCTCAGCATGCAGACATTT +
Preference number: 5 (lower is better)
Translates to: SLMTKADRLFVCIQRIASLGVSI*LSMQTF
Trigger: AAATGTCTGCATGCTGAGCAAAATGCTTACGCCAAG...AGAAGCTATCCGTTGGATACAAACAAACAGACGGTCAGCTTTAGTCATTAGGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp GGATTTTTGCTGTACCTTCCTGTTACCTGTTTGTGTGCAAAGTTGGAAAGCTGCTTTTGCAAAGACCCTTaGGCCAAGGTAGTACCATTT +
Preference number: 5 (lower is better)
Translates to: GFLLYLPVTCLCAKLESCFCKDP*AKVVPF
Trigger: AAATGGTACTACCTTGGCCAAAGGGTCTTTGCAAAA...GCAGCTTTCCAACTTTGCACACAAACAGGTAACAGGAAGGTACAGCAAAAATCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp GGGTTTATCTTAAAGATGGGGGCGAAGGGGGTGTCTGCAAAGAAGCAATTCAAAAAGCTGGAAAATGCCTaGTTTACATGCATGAATGTG +
Preference number: 5 (lower is better)
Translates to: GFILKMGAKGVSAKKQFKKLENA*FTCMNV
Trigger: CACATTCATGCATGTAAACAAGGCATTTTCCAGCTT...TTTGAATTGCTTCTTTGCAGACACCCCCTTCGCCCCCATCTTTAAGATAAACCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp TCTGAACCAAGAAAGGTTGAGAGCTCCAGGTATTGTGTGGAGAACATTCTGGAGTTACGATACTGTGTGTaGCAAATAATGCCTAGACCA +
Preference number: 5 (lower is better)
Translates to: SEPRKVESSRYCVENILELRYCV*QIMPRP
Trigger: TGGTCTAGGCATTATTTGCAACACACAGTATCGTAA...CTCCAGAATGTTCTCCACACAATACCTGGAGCTCTCAACCTTTCTTGGTTCAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp TCCCTAATGACTAAAGCTGACCGTCTGTTTGTTTGTATCCAACGGATAGCTTCTATCACTGCATACACTTaGGTCACTGGTGTGTGCAAA +
Preference number: 5 (lower is better)
Translates to: SLMTKADRLFVCIQRIASITAYT*VTGVCK
Trigger: TTTGCACACACCAGTGACCAAAGTGTATGCAGTGAT...AGAAGCTATCCGTTGGATACAAACAAACAGACGGTCAGCTTTAGTCATTAGGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp TGTGCACGTGTCTCTGTGAGCACATTCACGGTGCATGCACCATTTTTGATGTCTTATCTACTTCCTCTATaGCCCATCAAAGAGAGAAAA +
Preference number: 5 (lower is better)
Translates to: CARVSVSTFTVHAPFLMSYLLPL*PIKERK
Trigger: TTTTCTCTCTTTGATGGGCAATAGAGGAAGTAGATA...AGACATCAAAAATGGTGCATGCACCGTGAATGTGCTCACAGAGACACGTGCACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp TTAAGGGTTTACATTGCAGGGGGAAATGTACCTCGAGGTATTATTTTGTGTGAGACCCCAGATGTCATTTaGTTCCCTTCACCCCATTTG +
Preference number: 5 (lower is better)
Translates to: LRVYIAGGNVPRGIILCETPDVI*FPSPHL
Trigger: CAAATGGGGTGAAGGGAACAAAATGACATCTGGGGT...CTCACACAAAATAATACCTCGAGGTACATTTCCCCCTGCAATGTAAACCCTTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp ACTTCACAAATTATTTACGTTTGGAATTCTGACGACTGGCCTCTGATATATACACATGCTGGGGATCTTTaGCAATCCTCCCACCCACCT +
Preference number: 5 (lower is better)
Translates to: TSQIIYVWNSDDWPLIYTHAGDL*QSSHPP
Trigger: AGGTGGGTGGGAGGATTGCAAAAGATCCCCAGCATG...TGTATATATCAGAGGCCAGTCGTCAGAATTCCAAACGTAAATAATTTGTGAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS GCA 90 bp TCCACCTTGGAACTGCTTTCTTCCGATACTTCTCCCTCATTGGTTTaGATGGGAACAGATTTTGTGCAAAACTCTGCAGAAACACAAAAA +
Preference number: 5 (lower is better)
Translates to: STLELLSSDTSPSLV*MGTDFVQNSAETQK
Trigger: TTTTTGTGTTTCTGCAGAGTTTTGCACAAAATCTGTTCCCATGCAAACCAATGAGGGAGAAGTATCGGAAGAAAGCAGTTCCAAGGTGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000402203.5
ENST00000441751.5
CDS CCA 90 bp AAAATAAGGCCCACTATCTGTGGTTCCCATGTCTTTGGAATTAGGTaGACGGAACCCAGATCGATCCTTCCTCATGATATCATTAAAATC +
Preference number: 5 (lower is better)
Translates to: KIRPTICGSHVFGIR*TEPRSILPHDIIKI
Trigger: GATTTTAATGATATCATGAGGAAGGATCGATCTGGGTTCCGTCCACCTAATTCCAAAGACATGGGAACCACAGATAGTGGGCCTTATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000402203.5
ENST00000446273.1
ENST00000454349.7
ENST00000497559.1
CDS-3UTR CAA 90 bp TCTGACGACTGGCCTCTGATATATACAGGACAATCCAAGCTTTGGTGGAAAAGAAATCCATTTTGCTGCTaGGATTATCTTCAGTCTGAC +
Preference number: 5 (lower is better)
Translates to: SDDWPLIYTGQSKLWWKRNPFCC*DYLQSD
Trigger: GTCAGACTGAAGATAATCCAAGCAGCAAAATGGATT...TCTTTTCCACCAAAGCTTGGATTGTCCTGTATATATCAGAGGCCAGTCGTCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR CAA 90 bp GGGTTTATCTTAAAGATGGGGGCGAAGGGGGTGTCTGCAAAGAAGCAATTCAAAACAGACAAATCCATTTaGCTGCTTGGATTATCTTCA +
Preference number: 5 (lower is better)
Translates to: GFILKMGAKGVSAKKQFKTDKSI*LLGLSS
Trigger: TGAAGATAATCCAAGCAGCAAAATGGATTTGTCTGT...TTTGAATTGCTTCTTTGCAGACACCCCCTTCGCCCCCATCTTTAAGATAAACCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp TCCCTAATGACTAAAGCTGACCGTCTGTTTGTTTGTATCCAACGGATAGCTTCTGTCACGAGGTCAGAGTaGAAAGTTCTAAGTTCAGAT +
Preference number: 5 (lower is better)
Translates to: SLMTKADRLFVCIQRIASVTRSE*KVLSSD
Trigger: ATCTGAACTTAGAACTTTCAACTCTGACCTCGTGAC...AGAAGCTATCCGTTGGATACAAACAAACAGACGGTCAGCTTTAGTCATTAGGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp GGGTTTATCTTAAAGATGGGGGCGAAGGGGGTGTCTGCAAAGAAGCAATTCAAAAGAATTTCCCATTCTTaGTCTCACAAAACCACTGAA +
Preference number: 5 (lower is better)
Translates to: GFILKMGAKGVSAKKQFKRISHS*SHKTTE
Trigger: TTCAGTGGTTTTGTGAGACAAAGAATGGGAAATTCT...TTTGAATTGCTTCTTTGCAGACACCCCCTTCGCCCCCATCTTTAAGATAAACCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp GGATTTTTGCTGTACCTTCCTGTTACCTGTTTGTGTGCAAAGTTGGAAAGCTGCGTTTGGAAGAACCGATaGCTAACTTATGCTACATTC +
Preference number: 5 (lower is better)
Translates to: GFLLYLPVTCLCAKLESCVWKNR*LTYATF
Trigger: GAATGTAGCATAAGTTAGCAATCGGTTCTTCCAAAC...GCAGCTTTCCAACTTTGCACACAAACAGGTAACAGGAAGGTACAGCAAAAATCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp TCTGAACCAAGAAAGGTTGAGAGCTCCAGGTATTGTGTGGAGAACATTCTGGAGAAGACTGACAATTCATaGTATACACACAGACCAGAA +
Preference number: 5 (lower is better)
Translates to: SEPRKVESSRYCVENILEKTDNS*YTHRPE
Trigger: TTCTGGTCTGTGTGTATACAATGAATTGTCAGTCTT...CTCCAGAATGTTCTCCACACAATACCTGGAGCTCTCAACCTTTCTTGGTTCAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp TCCCTAATGACTAAAGCTGACCGTCTGTTTGTTTGTATCCAACGGATAGCTTCTCCTCGAGGTATTATTTaGTGTGAGACAGTTGAAACG +
Preference number: 5 (lower is better)
Translates to: SLMTKADRLFVCIQRIASPRGII*CETVET
Trigger: CGTTTCAACTGTCTCACACAAAATAATACCTCGAGG...AGAAGCTATCCGTTGGATACAAACAAACAGACGGTCAGCTTTAGTCATTAGGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp TTAAGGGTTTACATTGCAGGGGGAAATGTACCTCGAGGTATTATTTTGTGTGAGAAATCCAGCCTCTTTTaGATGCCCTTTTCTGCACCT +
Preference number: 5 (lower is better)
Translates to: LRVYIAGGNVPRGIILCEKSSLF*MPFSAP
Trigger: AGGTGCAGAAAAGGGCATCAAAAAGAGGCTGGATTT...CTCACACAAAATAATACCTCGAGGTACATTTCCCCCTGCAATGTAAACCCTTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp ACTTCACAAATTATTTACGTTTGGAATTCTGACGACTGGCCTCTGATATATACACGTCCTCCTCCCCAGTaGGAAGAGTTGTTGTTCTTG +
Preference number: 5 (lower is better)
Translates to: TSQIIYVWNSDDWPLIYTRPPPQ*EELLFL
Trigger: CAAGAACAACAACTCTTCCAACTGGGGAGGAGGACG...TGTATATATCAGAGGCCAGTCGTCAGAATTCCAAACGTAAATAATTTGTGAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR CAA 90 bp TTAAGGGTTTACATTGCAGGGGGAAATGTACCTCGAGGTATTATTTTGTGTGAGACTATAGCGCCATTTTaGTGCATATTGGCTTCCTGT +
Preference number: 5 (lower is better)
Translates to: LRVYIAGGNVPRGIILCETIAPF*CILASC
Trigger: ACAGGAAGCCAATATGCACAAAAATGGCGCTATAGT...CTCACACAAAATAATACCTCGAGGTACATTTCCCCCTGCAATGTAAACCCTTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp TTAAGGGTTTACATTGCAGGGGGAAATGTACCTCGAGGTATTATTTTGTGTGAGAACCATCCCAACTTGTaGATATTGGCTAGATATGGG +
Preference number: 5 (lower is better)
Translates to: LRVYIAGGNVPRGIILCENHPNL*ILARYG
Trigger: CCCATATCTAGCCAATATCAACAAGTTGGGATGGTT...CTCACACAAAATAATACCTCGAGGTACATTTCCCCCTGCAATGTAAACCCTTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp TTAAGGGTTTACATTGCAGGGGGAAATGTACCTCGAGGTATTATTTTGTGTGAGCCACATGAGCAGCATTaGTTAAAAGCATTTCCCTCT +
Preference number: 5 (lower is better)
Translates to: LRVYIAGGNVPRGIILCEPHEQH*LKAFPS
Trigger: AGAGGGAAATGCTTTTAACAAATGCTGCTCATGTGG...CTCACACAAAATAATACCTCGAGGTACATTTCCCCCTGCAATGTAAACCCTTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp TCCCTAATGACTAAAGCTGACCGTCTGTTTGTTTGTATCCAACGGATAGCTTCTTTTGTTGTCTGTTTTTaGGTTACGCAGAACAGGGAT +
Preference number: 5 (lower is better)
Translates to: SLMTKADRLFVCIQRIASFVVCF*VTQNRD
Trigger: ATCCCTGTTCTGCGTAACCAAAAAACAGACAACAAA...AGAAGCTATCCGTTGGATACAAACAAACAGACGGTCAGCTTTAGTCATTAGGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp GGATTTTTGCTGTACCTTCCTGTTACCTGTTTGTGTGCAAAGTTGGAAAGCTGCTATCTACTTCCTCTATaGCCCATCAAAGAGAGAAAA +
Preference number: 5 (lower is better)
Translates to: GFLLYLPVTCLCAKLESCYLLPL*PIKERK
Trigger: TTTTCTCTCTTTGATGGGCAATAGAGGAAGTAGATA...GCAGCTTTCCAACTTTGCACACAAACAGGTAACAGGAAGGTACAGCAAAAATCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp TCCCTAATGACTAAAGCTGACCGTCTGTTTGTTTGTATCCAACGGATAGCTTCTCCCAAGAGTCATTTTTaGACCCAGTTGATTTCTGAA +
Preference number: 5 (lower is better)
Translates to: SLMTKADRLFVCIQRIASPKSHF*TQLISE
Trigger: TTCAGAAATCAACTGGGTCAAAAAATGACTCTTGGG...AGAAGCTATCCGTTGGATACAAACAAACAGACGGTCAGCTTTAGTCATTAGGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp AGAATTTACTCACTACTTCACAAATTATTTACGTTTGGAATTCTGACGACTGGCCCATCCAGACTTCATTaGATTGCTTTGGCTGGGTGC +
Preference number: 5 (lower is better)
Translates to: RIYSLLHKLFTFGILTTGPSRLH*IALAGC
Trigger: GCACCCAGCCAAAGCAATCAAATGAAGTCTGGATGG...GCCAGTCGTCAGAATTCCAAACGTAAATAATTTGTGAAGTAGTGAGTAAATTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS TCA 90 bp CAATTTCCTAGTCCATTGTTGTTCTCTGTAGTAGAGTTGGAAGATTaGACAGATTTAGCCTTAGGGTCAGATTTCCAGACCCCAAGATTA +
Preference number: 5 (lower is better)
Translates to: QFPSPLLFSVVELED*TDLALGSDFQTPRL
Trigger: TAATCTTGGGGTCTGGAAATCTGACCCTAAGGCTAAATCTGTTCAATCTTCCAACTCTACTACAGAGAACAACAATGGACTAGGAAATTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp TTAAGGGTTTACATTGCAGGGGGAAATGTACCTCGAGGTATTATTTTGTGTGAGTTTCCTAGTCCATTGTaGTTCTCTGTAGTAGAGTTG +
Preference number: 5 (lower is better)
Translates to: LRVYIAGGNVPRGIILCEFPSPL*FSVVEL
Trigger: CAACTCTACTACAGAGAACAACAATGGACTAGGAAA...CTCACACAAAATAATACCTCGAGGTACATTTCCCCCTGCAATGTAAACCCTTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp TTAAGGGTTTACATTGCAGGGGGAAATGTACCTCGAGGTATTATTTTGTGTGAGAGAATTTCCCATTCTTaGTCTCACAAAACCACTGAA +
Preference number: 5 (lower is better)
Translates to: LRVYIAGGNVPRGIILCERISHS*SHKTTE
Trigger: TTCAGTGGTTTTGTGAGACAAAGAATGGGAAATTCT...CTCACACAAAATAATACCTCGAGGTACATTTCCCCCTGCAATGTAAACCCTTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp TTAAGGGTTTACATTGCAGGGGGAAATGTACCTCGAGGTATTATTTTGTGTGAGAAGACTGACAATTCATaGTATACACACAGACCAGAA +
Preference number: 5 (lower is better)
Translates to: LRVYIAGGNVPRGIILCEKTDNS*YTHRPE
Trigger: TTCTGGTCTGTGTGTATACAATGAATTGTCAGTCTT...CTCACACAAAATAATACCTCGAGGTACATTTCCCCCTGCAATGTAAACCCTTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000454349.7
CDS-3UTR CAA 90 bp ACTTCACAAATTATTTACGTTTGGAATTCTGACGACTGGCCTCTGATATATACAAGTGCTAGAATTTGGTaGGTTTGGACCACTCCATTC +
Preference number: 5 (lower is better)
Translates to: TSQIIYVWNSDDWPLIYTSARIW*VWTTPF
Trigger: GAATGGAGTGGTCCAAACCAACCAAATTCTAGCACT...TGTATATATCAGAGGCCAGTCGTCAGAATTCCAAACGTAAATAATTTGTGAAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS-3UTR CAA 90 bp AGAATTTACTCACTACTTCACAAATTATTTACGTTTGGAATTCTGACGACTGGCACAGACAAATCCATTTaGCTGCTTGGATTATCTTCA +
Preference number: 5 (lower is better)
Translates to: RIYSLLHKLFTFGILTTGTDKSI*LLGLSS
Trigger: TGAAGATAATCCAAGCAGCAAAATGGATTTGTCTGT...GCCAGTCGTCAGAATTCCAAACGTAAATAATTTGTGAAGTAGTGAGTAAATTCT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS TCA 72 bp CCGGGACGCTGCGCAGGGACCCGAGGATCCGAGGCCTaGCGCCTCCCTCTGCCACCGCCAGCCAGGGGCGGA +
Preference number: 6 (lower is better)
Translates to: PGRCAGTRGSEA*RLPLPPPARGG
Trigger: TCCGCCCCTGGCTGGCGGTGGCAGAGGGAGGCGTCAGGCCTCGGATCCTCGGGTCCCTGCGCAGCGTCCCGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402203.5
CDS TCA 72 bp GAGCCGTGCCGGCTCCGAGTGCGCGGCGTTTCGCTGTaGGGCGAGGCGCGCAGTCTCCGCTTCTCCGCAGAC +
Preference number: 6 (lower is better)
Translates to: EPCRLRVRGVSL*GEARSLRFSAD
Trigger: GTCTGCGGAGAAGCGGAGACTGCGCGCCTCGCCTCACAGCGAAACGCCGCGCACTCGGAGCCGGCACGGCTC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301923.13
ENST00000441751.5
CDS CCA 72 bp CGGCGGCACCTCCCGAGGCATGTAGCGGGCGGCGCTTaGCGGTTGTCCGTTCGGCACTGCCACCCTTTTGGC +
Preference number: 6 (lower is better)
Translates to: RRHLPRHVAGGA*RLSVRHCHPFG
Trigger: GCCAAAAGGGTGGCAGTGCCGAACGGACAACCGCCAAGCGCCGCCCGCTACATGCCTCGGGAGGTGCCGCCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000402203.5
ENST00000454349.7
CDS CAA 72 bp GCGGCGGCACCTCCCGAGGCATGTAGCGGGCGGCGCTaGGCGGTTGTCCGTTCGGCACTGCCACCCTTTTGG +
Preference number: 6 (lower is better)
Translates to: AAAPPEACSGRR*AVVRSALPPFW
Trigger: CCAAAAGGGTGGCAGTGCCGAACGGACAACCGCCAAGCGCCGCCCGCTACATGCCTCGGGAGGTGCCGCCGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000402203.5
ENST00000454349.7
CDS GCA 72 bp AAAAACCACAACCCGCCGAGCCGTGCCGGCTCCGAGTaGGCGGCGTTTCGCTGTGAGGCGAGGCGCGCAGTC +
Preference number: 6 (lower is better)
Translates to: KNHNPPSRAGSE*AAFRCEARRAV
Trigger: GACTGCGCGCCTCGCCTCACAGCGAAACGCCGCGCACTCGGAGCCGGCACGGCTCGGCGGGTTGTGGTTTTT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301923.13
ENST00000441751.5
CDS GCA 72 bp ACGGGATCTGACTGGTTCTGGCCGGTCTCCAGCGACTaGCACCCCGCAGCTGGCGCACTTGGGGTTGCTGCA +
Preference number: 6 (lower is better)
Translates to: TGSDWFWPVSSD*HPAAGALGVAA
Trigger: TGCAGCAACCCCAAGTGCGCCAGCTGCGGGGTGGCAGTCGCTGGAGACCGGCCAGAACCAGTCAGATCCCGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000402203.5
ENST00000454349.7
CDS CAA 90 bp TCGCGGCGGCACCTCCCGAGGCATGTAGCGGGCGGCGCTTGGCGGTaGTCCGTTCGGCACTGCCACCCTTTTGGCATTGTTGCCACCATT +
Preference number: 6 (lower is better)
Translates to: SRRHLPRHVAGGAWR*SVRHCHPFGIVATI
Trigger: AATGGTGGCAACAATGCCAAAAGGGTGGCAGTGCCGAACGGACAACCGCCAAGCGCCGCCCGCTACATGCCTCGGGAGGTGCCGCCGCGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000402203.5
ENST00000454349.7
CDS CAA 90 bp AACGGAATCGCGGCGGCACCTCCCGAGGCATGTAGCGGGCGGCGCTaGGCGGTTGTCCGTTCGGCACTGCCACCCTTTTGGCATTGTTGC +
Preference number: 6 (lower is better)
Translates to: NGIAAAPPEACSGRR*AVVRSALPPFWHCC
Trigger: GCAACAATGCCAAAAGGGTGGCAGTGCCGAACGGACAACCGCCAAGCGCCGCCCGCTACATGCCTCGGGAGGTGCCGCCGCGATTCCGTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000402203.5
ENST00000454349.7
CDS CCA 72 bp GGGCCCAACAGGATGAGAGGGCGAGTGCTTCATGCCTaGCTGCCTCTGCTGCTGCTGCTGCTGCTGCTGCAG +
Preference number: 6 (lower is better)
Translates to: GPNRMRGRVLHA*LPLLLLLLLLQ
Trigger: CTGCAGCAGCAGCAGCAGCAGCAGCAGAGGCAGCCAGGCATGAAGCACTCGCCCTCTCATCCTGTTGGGCCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000402203.5
ENST00000446273.1
ENST00000454349.7
ENST00000467658.1
CDS GCA 72 bp GGGGGCTGCCCACGTTTTAGTAACACTTTGTGGTCCTaGTGGCAACGGAATCGCGGCGGCACCTCCCGAGGC +
Preference number: 6 (lower is better)
Translates to: GGCPRFSNTLWS*WQRNRGGTSRG
Trigger: GCCTCGGGAGGTGCCGCCGCGATTCCGTTGCCAGCAGGACCACAAAGTGTTACTAAAACGTGGGCAGCCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000402203.5
ENST00000454349.7
CDS GCA 72 bp AGCGTTGGCGGGCGTGTTCCCCCAGCCTGTGGTCGATaGTCCTGTATCATCCATCTCGCCCCACCCAGGACT +
Preference number: 6 (lower is better)
Translates to: SVGGRVPPACGR*SCIIHLAPPRT
Trigger: AGTCCTGGGTGGGGCGAGATGGATGATACAGGAGCATCGACCACAGGCTGGGGGAACACGCCCGCCAACGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000301923.13
ENST00000402203.5
ENST00000446273.1
ENST00000454349.7
CDS GCA 72 bp GGCGAGTGCTTCATGCCTGGCTGCCTCTGCTGCTGCTaGTGCTGCTGCTGCAGTGCACTCACCATTCGAGCC +
Preference number: 6 (lower is better)
Translates to: GECFMPGCLCCC*CCCCSALTIRA
Trigger: GGCTCGAATGGTGAGTGCACTGCAGCAGCAGCAGCAGCAGCAGCAGAGGCAGCCAGGCATGAAGCACTCGCC
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000402203.5
ENST00000446273.1
ENST00000454349.7
ENST00000467658.1
CDS CCA 72 bp CATTGGGAGCGTTGGCGGGCGTGTTCCCCCAGCCTGTaGTCGATGCTCCTGTATCATCCATCTCGCCCCACC +
Preference number: 6 (lower is better)
Translates to: HWERWRACSPSL*SMLLYHPSRPT
Trigger: GGTGGGGCGAGATGGATGATACAGGAGCATCGACCACAGGCTGGGGGAACACGCCCGCCAACGCTCCCAATG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000301923.13
ENST00000402203.5
ENST00000446273.1
ENST00000454349.7
CDS CCA 72 bp GCTGGAATTGGAAGGTCGAACGTTGCCTGGAGGTGGTaGGGGTGGGCCTCCCCACGAACCAGAAGCCTCTGG +
Preference number: 6 (lower is better)
Translates to: AGIGRSNVAWRW*GWASPRTRSLW
Trigger: CCAGAGGCTTCTGGTTCGTGGGGAGGCCCACCCCCACCACCTCCAGGCAACGTTCGACCTTCCAATTCCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335727.13
ENST00000446273.1
ENST00000454349.7
CDS CCA 72 bp GCTGCTCCAGCTGGAATTGGAAGGTCGAACGTTGCCTaGAGGTGGTGGGGGTGGGCCTCCCCACGAACCAGA +
Preference number: 6 (lower is better)
Translates to: AAPAGIGRSNVA*RWWGWASPRTR
Trigger: TCTGGTTCGTGGGGAGGCCCACCCCCACCACCTCCAGGCAACGTTCGACCTTCCAATTCCAGCTGGAGCAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335727.13
ENST00000446273.1
ENST00000454349.7
CDS CCA 72 bp GTGTTGCAGGCTGTGGCCCGCTGCTCCAGCTGGAATTaGAAGGTCGAACGTTGCCTGGAGGTGGTGGGGGTG +
Preference number: 6 (lower is better)
Translates to: VLQAVARCSSWN*KVERCLEVVGV
Trigger: CACCCCCACCACCTCCAGGCAACGTTCGACCTTCCAATTCCAGCTGGAGCAGCGGGCCACAGCCTGCAACAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000335727.13
ENST00000446273.1
ENST00000454349.7
CDS CAA 72 bp CACCTCCCGAGGCATGTAGCGGGCGGCGCTTGGCGGTaGTCCGTTCGGCACTGCCACCCTTTTGGCATTGTT +
Preference number: 6 (lower is better)
Translates to: HLPRHVAGGAWR*SVRHCHPFGIV
Trigger: AACAATGCCAAAAGGGTGGCAGTGCCGAACGGACAACCGCCAAGCGCCGCCCGCTACATGCCTCGGGAGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000402203.5
ENST00000454349.7
CDS CAA 72 bp GGTGTTGCAGGCTGTGGCCCGCTGCTCCAGCTGGAATaGGAAGGTCGAACGTTGCCTGGAGGTGGTGGGGGT +
Preference number: 6 (lower is better)
Translates to: GVAGCGPLLQLE*EGRTLPGGGGG
Trigger: ACCCCCACCACCTCCAGGCAACGTTCGACCTTCCAATTCCAGCTGGAGCAGCGGGCCACAGCCTGCAACACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000335727.13
ENST00000446273.1
ENST00000454349.7
CDS CAA 90 bp AGCATGCAGGACGGTGGAGGGGGCTGCCCACGTTTTAGTAACACTTaGTGGTCCTGCTGGCAACGGAATCGCGGCGGCACCTCCCGAGGC +
Preference number: 6 (lower is better)
Translates to: SMQDGGGGCPRFSNT*WSCWQRNRGGTSRG
Trigger: GCCTCGGGAGGTGCCGCCGCGATTCCGTTGCCAGCAGGACCACAAAGTGTTACTAAAACGTGGGCAGCCCCCTCCACCGTCCTGCATGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000402203.5
ENST00000454349.7
CDS CAA 90 bp TCATCCTTAGGTGTTGCAGGCTGTGGCCCGCTGCTCCAGCTGGAATaGGAAGGTCGAACGTTGCCTGGAGGTGGTGGGGGTGGGCCTCCC +
Preference number: 6 (lower is better)
Translates to: SSLGVAGCGPLLQLE*EGRTLPGGGGGGPP
Trigger: GGGAGGCCCACCCCCACCACCTCCAGGCAACGTTCGACCTTCCAATTCCAGCTGGAGCAGCGGGCCACAGCCTGCAACACCTAAGGATGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000335727.13
ENST00000446273.1
ENST00000454349.7
CDS CAA 90 bp GCAGTCCCACTCTCACTCTGCAGCAGCGCTCCTGTCACTTGTGCGTaGTTTGGGTTTGCTCCAGGTGCTGTGCAGGGAGGAGGCCCTGCC +
Preference number: 6 (lower is better)
Translates to: AVPLSLCSSAPVTCA*FGFAPGAVQGGGPA
Trigger: GGCAGGGCCTCCTCCCTGCACAGCACCTGGAGCAAACCCAAACAACGCACAAGTGACAGGAGCGCTGCTGCAGAGTGAGAGTGGGACTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000402203.5
ENST00000454349.7
CDS GCA 72 bp TGGCTGCCTCTGCTGCTGCTGCTGCTGCTGCTGCAGTaGACTCACCATTCGAGCCAGCTGCTGCTCTTGCTG +
Preference number: 6 (lower is better)
Translates to: WLPLLLLLLLLQ*THHSSQLLLLL
Trigger: CAGCAAGAGCAGCAGCTGGCTCGAATGGTGAGTGCACTGCAGCAGCAGCAGCAGCAGCAGCAGAGGCAGCCA
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000402203.5
ENST00000446273.1
ENST00000454349.7
ENST00000467658.1
CDS GCA 72 bp ATGCCTGGCTGCCTCTGCTGCTGCTGCTGCTGCTGCTaGAGTGCACTCACCATTCGAGCCAGCTGCTGCTCT +
Preference number: 6 (lower is better)
Translates to: MPGCLCCCCCCC*SALTIRASCCS
Trigger: AGAGCAGCAGCTGGCTCGAATGGTGAGTGCACTGCAGCAGCAGCAGCAGCAGCAGCAGAGGCAGCCAGGCAT
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000402203.5
ENST00000446273.1
ENST00000454349.7
ENST00000467658.1
CDS GCA 72 bp TTCATGCCTGGCTGCCTCTGCTGCTGCTGCTGCTGCTaGTGCAGTGCACTCACCATTCGAGCCAGCTGCTGC +
Preference number: 6 (lower is better)
Translates to: FMPGCLCCCCCC*CSALTIRASCC
Trigger: GCAGCAGCTGGCTCGAATGGTGAGTGCACTGCAGCAGCAGCAGCAGCAGCAGCAGAGGCAGCCAGGCATGAA
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000402203.5
ENST00000446273.1
ENST00000454349.7
ENST00000467658.1
CDS GCA 72 bp TGCTTCATGCCTGGCTGCCTCTGCTGCTGCTGCTGCTaGTGCTGCAGTGCACTCACCATTCGAGCCAGCTGC +
Preference number: 6 (lower is better)
Translates to: CFMPGCLCCCCC*CCSALTIRASC
Trigger: GCAGCTGGCTCGAATGGTGAGTGCACTGCAGCAGCAGCAGCAGCAGCAGCAGAGGCAGCCAGGCATGAAGCA
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000402203.5
ENST00000446273.1
ENST00000454349.7
ENST00000467658.1
CDS GCA 72 bp GAGGGCGAGTGCTTCATGCCTGGCTGCCTCTGCTGCTaGTGCTGCTGCTGCTGCAGTGCACTCACCATTCGA +
Preference number: 6 (lower is better)
Translates to: EGECFMPGCLCC*CCCCCSALTIR
Trigger: TCGAATGGTGAGTGCACTGCAGCAGCAGCAGCAGCAGCAGCAGAGGCAGCCAGGCATGAAGCACTCGCCCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000402203.5
ENST00000446273.1
ENST00000454349.7
ENST00000467658.1
CDS CCA 72 bp ATTGGAAGGTCGAACGTTGCCTGGAGGTGGTGGGGGTaGGCCTCCCCACGAACCAGAAGCCTCTGGTTGTGG +
Preference number: 6 (lower is better)
Translates to: IGRSNVAWRWWG*ASPRTRSLWLW
Trigger: CCACAACCAGAGGCTTCTGGTTCGTGGGGAGGCCCACCCCCACCACCTCCAGGCAACGTTCGACCTTCCAAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335727.13
ENST00000446273.1
ENST00000454349.7
CDS CAA 72 bp GACGGTGGAGGGGGCTGCCCACGTTTTAGTAACACTTaGTGGTCCTGCTGGCAACGGAATCGCGGCGGCACC +
Preference number: 6 (lower is better)
Translates to: DGGGGCPRFSNT*WSCWQRNRGGT
Trigger: GGTGCCGCCGCGATTCCGTTGCCAGCAGGACCACAAAGTGTTACTAAAACGTGGGCAGCCCCCTCCACCGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000402203.5
ENST00000454349.7
CDS CAA 90 bp GCGGCGCTTGGCGGTTGTCCGTTCGGCACTGCCACCCTTTTGGCATaGTTGCCACCATTGACTGGTGGCGATGGAGAGCTGCCAATTGGG +
Preference number: 6 (lower is better)
Translates to: AALGGCPFGTATLLA*LPPLTGGDGELPIG
Trigger: CCCAATTGGCAGCTCTCCATCGCCACCAGTCAATGGTGGCAACAATGCCAAAAGGGTGGCAGTGCCGAACGGACAACCGCCAAGCGCCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000402203.5
ENST00000454349.7
CDS CAA 90 bp GACTGGCGCAGTCCCACTCTCACTCTGCAGCAGCGCTCCTGTCACTaGTGCGTTGTTTGGGTTTGCTCCAGGTGCTGTGCAGGGAGGAGG +
Preference number: 6 (lower is better)
Translates to: DWRSPTLTLQQRSCH*CVVWVCSRCCAGRR
Trigger: CCTCCTCCCTGCACAGCACCTGGAGCAAACCCAAACAACGCACAAGTGACAGGAGCGCTGCTGCAGAGTGAGAGTGGGACTGCGCCAGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301923.13
ENST00000402203.5
CDS CAA 90 bp GTCTGGCGCAGTCCCACTCTCACTCTGCAGCAGCGCTCCTGTCACTaGTGCGTTGTTTGGGTTTGCTCCAGGTGCTGTGCAGGGAGGAGG +
Preference number: 6 (lower is better)
Translates to: VWRSPTLTLQQRSCH*CVVWVCSRCCAGRR
Trigger: CCTCCTCCCTGCACAGCACCTGGAGCAAACCCAAACAACGCACAAGTGACAGGAGCGCTGCTGCAGAGTGAGAGTGGGACTGCGCCAGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS TCA 72 bp ACCATGTTGTCCAGATGCGGCTTGGGCCCAACAGGATaGGAGGGCGAGTGCTTCATGCCTGGCTGCCTCTGC +
Preference number: 6 (lower is better)
Translates to: TMLSRCGLGPTG*EGECFMPGCLC
Trigger: GCAGAGGCAGCCAGGCATGAAGCACTCGCCCTCTCATCCTGTTGGGCCCAAGCCGCATCTGGACAACATGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000402203.5
ENST00000446273.1
ENST00000454349.7
ENST00000467658.1
CDS TCA 72 bp CCCACCAAAAAGATTCAGAGCAGGTCCCACGGGATCTaGCTGGTTCTGGCCGGTCTCCAGCGACTGCCACCC +
Preference number: 6 (lower is better)
Translates to: PTKKIQSRSHGI*LVLAGLQRLPP
Trigger: GGGTGGCAGTCGCTGGAGACCGGCCAGAACCAGTCAGATCCCGTGGGACCTGCTCTGAATCTTTTTGGTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000402203.5
ENST00000454349.7
CDS TCA 72 bp TTGATTGCTTTGGCTGGGTGCATCTCCCCAGCCCCCTaGGTTCTTGGTCTGTGTGGCAGCGCTCTCCCACCC +
Preference number: 6 (lower is better)
Translates to: LIALAGCISPAP*VLGLCGSALPP
Trigger: GGGTGGGAGAGCGCTGCCACACAGACCAAGAACTCAGGGGGCTGGGGAGATGCACCCAGCCAAAGCAATCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335727.13
ENST00000446273.1
ENST00000454349.7
CDS CCA 72 bp GGCTGCCCACGTTTTAGTAACACTTTGTGGTCCTGCTaGCAACGGAATCGCGGCGGCACCTCCCGAGGCATG +
Preference number: 6 (lower is better)
Translates to: GCPRFSNTLWSC*QRNRGGTSRGM
Trigger: CATGCCTCGGGAGGTGCCGCCGCGATTCCGTTGCCAGCAGGACCACAAAGTGTTACTAAAACGTGGGCAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000402203.5
ENST00000454349.7
CDS CCA 72 bp CCAAAAAGATTCAGAGCAGGTCCCACGGGATCTGACTaGTTCTGGCCGGTCTCCAGCGACTGCCACCCCGCA +
Preference number: 6 (lower is better)
Translates to: PKRFRAGPTGSD*FWPVSSDCHPA
Trigger: TGCGGGGTGGCAGTCGCTGGAGACCGGCCAGAACCAGTCAGATCCCGTGGGACCTGCTCTGAATCTTTTTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000402203.5
ENST00000454349.7
CDS CAA 72 bp CACTCTGCAGCAGCGCTCCTGTCACTTGTGCGTTGTTaGGGTTTGCTCCAGGTGCTGTGCAGGGAGGAGGCC +
Preference number: 6 (lower is better)
Translates to: HSAAALLSLVRC*GLLQVLCREEA
Trigger: GGCCTCCTCCCTGCACAGCACCTGGAGCAAACCCAAACAACGCACAAGTGACAGGAGCGCTGCTGCAGAGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000402203.5
ENST00000454349.7
CDS CAA 90 bp GGTTGTCCGTTCGGCACTGCCACCCTTTTGGCATTGTTGCCACCATaGACTGGTGGCGATGGAGAGCTGCCAATTGGGCTGGCGGCCGTT +
Preference number: 6 (lower is better)
Translates to: GCPFGTATLLALLPP*TGGDGELPIGLAAV
Trigger: AACGGCCGCCAGCCCAATTGGCAGCTCTCCATCGCCACCAGTCAATGGTGGCAACAATGCCAAAAGGGTGGCAGTGCCGAACGGACAACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000402203.5
ENST00000454349.7
CDS CAA 90 bp GCGCTTGGCGGTTGTCCGTTCGGCACTGCCACCCTTTTGGCATTGTaGCCACCATTGACTGGTGGCGATGGAGAGCTGCCAATTGGGCTG +
Preference number: 6 (lower is better)
Translates to: ALGGCPFGTATLLAL*PPLTGGDGELPIGL
Trigger: CAGCCCAATTGGCAGCTCTCCATCGCCACCAGTCAATGGTGGCAACAATGCCAAAAGGGTGGCAGTGCCGAACGGACAACCGCCAAGCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000402203.5
ENST00000454349.7
CDS CAA 90 bp CGCAGCTGGCGCACTTGGGGTTGCTGCAGGTGTAGGGGGCTGAGCTaGTGCCAGAAAGCGGCTGACTTCATCATCAGTGGCAAACTCAGC +
Preference number: 6 (lower is better)
Translates to: RSWRTWGCCRCRGLS*CQKAADFIISGKLS
Trigger: GCTGAGTTTGCCACTGATGATGAAGTCAGCCGCTTTCTGGCACAAGCTCAGCCCCCTACACCTGCAGCAACCCCAAGTGCGCCAGCTGCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000402203.5
ENST00000454349.7
CDS TCA 72 bp CAGGACCCGTATGGCCACCCAGTGTGTCACCAGGGATaGTATCAAACTGGTTGTACGGTGACCCTCCCCGGG +
Preference number: 6 (lower is better)
Translates to: QDPYGHPVCHQG*YQTGCTVTLPG
Trigger: CCCGGGGAGGGTCACCGTACAACCAGTTTGATATCATCCCTGGTGACACACTGGGTGGCCATACGGGTCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000402203.5
ENST00000446273.1
ENST00000454349.7
CDS GCA 72 bp CCCACTCTCACTCTGCAGCAGCGCTCCTGTCACTTGTaGGTTGTTTGGGTTTGCTCCAGGTGCTGTGCAGGG +
Preference number: 6 (lower is better)
Translates to: PTLTLQQRSCHL*VVWVCSRCCAG
Trigger: CCCTGCACAGCACCTGGAGCAAACCCAAACAACGCACAAGTGACAGGAGCGCTGCTGCAGAGTGAGAGTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000402203.5
ENST00000454349.7
CDS GCA 72 bp CCAAGGGTTGAGTCTGGCGCAGTCCCACTCTCACTCTaGAGCAGCGCTCCTGTCACTTGTGCGTTGTTTGGG +
Preference number: 6 (lower is better)
Translates to: PRVESGAVPLSL*SSAPVTCALFG
Trigger: CCCAAACAACGCACAAGTGACAGGAGCGCTGCTGCAGAGTGAGAGTGGGACTGCGCCAGACTCAACCCTTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS CCA 72 bp TGCCACCCTTTTGGCATTGTTGCCACCATTGACTGGTaGCGATGGAGAGCTGCCAATTGGGCTGGCGGCCGT +
Preference number: 6 (lower is better)
Translates to: CHPFGIVATIDW*RWRAANWAGGR
Trigger: ACGGCCGCCAGCCCAATTGGCAGCTCTCCATCGCCACCAGTCAATGGTGGCAACAATGCCAAAAGGGTGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000402203.5
ENST00000454349.7
CDS CCA 72 bp CACTGCCACCCTTTTGGCATTGTTGCCACCATTGACTaGTGGCGATGGAGAGCTGCCAATTGGGCTGGCGGC +
Preference number: 6 (lower is better)
Translates to: HCHPFGIVATID*WRWRAANWAGG
Trigger: GCCGCCAGCCCAATTGGCAGCTCTCCATCGCCACCAGTCAATGGTGGCAACAATGCCAAAAGGGTGGCAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000402203.5
ENST00000454349.7
CDS CAA 72 bp GGCGGTTGTCCGTTCGGCACTGCCACCCTTTTGGCATaGTTGCCACCATTGACTGGTGGCGATGGAGAGCTG +
Preference number: 6 (lower is better)
Translates to: GGCPFGTATLLA*LPPLTGGDGEL
Trigger: CAGCTCTCCATCGCCACCAGTCAATGGTGGCAACAATGCCAAAAGGGTGGCAGTGCCGAACGGACAACCGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000402203.5
ENST00000454349.7
CDS CAA 72 bp GCGCTTGGCGGTTGTCCGTTCGGCACTGCCACCCTTTaGGCATTGTTGCCACCATTGACTGGTGGCGATGGA +
Preference number: 6 (lower is better)
Translates to: ALGGCPFGTATL*ALLPPLTGGDG
Trigger: TCCATCGCCACCAGTCAATGGTGGCAACAATGCCAAAAGGGTGGCAGTGCCGAACGGACAACCGCCAAGCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000402203.5
ENST00000454349.7
CDS CAA 72 bp CGCACTTGGGGTTGCTGCAGGTGTAGGGGGCTGAGCTaGTGCCAGAAAGCGGCTGACTTCATCATCAGTGGC +
Preference number: 6 (lower is better)
Translates to: RTWGCCRCRGLS*CQKAADFIISG
Trigger: GCCACTGATGATGAAGTCAGCCGCTTTCTGGCACAAGCTCAGCCCCCTACACCTGCAGCAACCCCAAGTGCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000402203.5
ENST00000454349.7
CDS CAA 90 bp GTGGGTGTAGGACCGAATACTCACATGTGCAGTGCAGTTTGGGCCTaGGCCGCCTCCTGTTTGGTGCTGTATCGGATCAGGGCAGTGCCC +
Preference number: 6 (lower is better)
Translates to: VGVGPNTHMCSAVWA*AASCLVLYRIRAVP
Trigger: GGGCACTGCCCTGATCCGATACAGCACCAAACAGGAGGCGGCCAAGGCCCAAACTGCACTGCACATGTGAGTATTCGGTCCTACACCCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS CAA 90 bp GGGAGGTGCCGTTGTTGGAGGAGGCTCCCGAGCCCCAAGTGGAATTaGCATAATTTGAAGCAGCAGCACCTCCAAGGGTTGAGTCTGGCG +
Preference number: 6 (lower is better)
Translates to: GRCRCWRRLPSPKWN*HNLKQQHLQGLSLA
Trigger: CGCCAGACTCAACCCTTGGAGGTGCTGCTGCTTCAAATTATGCAAATTCCACTTGGGGCTCGGGAGCCTCCTCCAACAACGGCACCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS TCA 72 bp TCGGCACTGCCACCCTTTTGGCATTGTTGCCACCATTaGCTGGTGGCGATGGAGAGCTGCCAATTGGGCTGG +
Preference number: 6 (lower is better)
Translates to: SALPPFWHCCHH*LVAMESCQLGW
Trigger: CCAGCCCAATTGGCAGCTCTCCATCGCCACCAGTCAATGGTGGCAACAATGCCAAAAGGGTGGCAGTGCCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000402203.5
ENST00000454349.7
CDS GCA 72 bp CTTGTCCCCAGCTTGCTGAGTTGTGGGAGGAAGCACTaGCCTGAGAGCCAGTGGTGTTCCAGACTCCTCCAT +
Preference number: 6 (lower is better)
Translates to: LVPSLLSCGRKH*PESQWCSRLLH
Trigger: ATGGAGGAGTCTGGAACACCACTGGCTCTCAGGGCAGTGCTTCCTCCCACAACTCAGCAAGCTGGGGACAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000402203.5
ENST00000446273.1
ENST00000454349.7
CDS GCA 72 bp CTCTTCCCAACCACTGGGTTCCTCATCCTTAGGTGTTaGAGGCTGTGGCCCGCTGCTCCAGCTGGAATTGGA +
Preference number: 6 (lower is better)
Translates to: LFPTTGFLILRC*RLWPAAPAGIG
Trigger: TCCAATTCCAGCTGGAGCAGCGGGCCACAGCCTGCAACACCTAAGGATGAGGAACCCAGTGGTTGGGAAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335727.13
ENST00000446273.1
ENST00000454349.7
CDS CCA 72 bp CCTTTTGGCATTGTTGCCACCATTGACTGGTGGCGATaGAGAGCTGCCAATTGGGCTGGCGGCCGTTGGTTG +
Preference number: 6 (lower is better)
Translates to: PFGIVATIDWWR*RAANWAGGRWL
Trigger: CAACCAACGGCCGCCAGCCCAATTGGCAGCTCTCCATCGCCACCAGTCAATGGTGGCAACAATGCCAAAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000402203.5
ENST00000454349.7
CDS CCA 72 bp ACCACTGGGTTCCTCATCCTTAGGTGTTGCAGGCTGTaGCCCGCTGCTCCAGCTGGAATTGGAAGGTCGAAC +
Preference number: 6 (lower is better)
Translates to: TTGFLILRCCRL*PAAPAGIGRSN
Trigger: GTTCGACCTTCCAATTCCAGCTGGAGCAGCGGGCCACAGCCTGCAACACCTAAGGATGAGGAACCCAGTGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335727.13
ENST00000446273.1
ENST00000454349.7
CDS CCA 72 bp TGCTCCAGACTGATGCCGATTTACTGGTCATTGGGGTaGGCAGGTTTGGTTCTCGAGGTGCTGGGCCCCCTT +
Preference number: 6 (lower is better)
Translates to: CSRLMPIYWSLG*AGLVLEVLGPL
Trigger: AAGGGGGCCCAGCACCTCGAGAACCAAACCTGCCCACCCCAATGACCAGTAAATCGGCATCAGTCTGGAGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000446273.1
ENST00000454349.7
CDS CAA 72 bp GTGGCGATGGAGAGCTGCCAATTGGGCTGGCGGCCGTaGGTTGGCTTAAACTTGGTTTCGTCACTTCGGGCA +
Preference number: 6 (lower is better)
Translates to: VAMESCQLGWRP*VGLNLVSSLRA
Trigger: TGCCCGAAGTGACGAAACCAAGTTTAAGCCAACCAACGGCCGCCAGCCCAATTGGCAGCTCTCCATCGCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000402203.5
ENST00000454349.7
CDS CAA 72 bp GGTTGTCCGTTCGGCACTGCCACCCTTTTGGCATTGTaGCCACCATTGACTGGTGGCGATGGAGAGCTGCCA +
Preference number: 6 (lower is better)
Translates to: GCPFGTATLLAL*PPLTGGDGELP
Trigger: TGGCAGCTCTCCATCGCCACCAGTCAATGGTGGCAACAATGCCAAAAGGGTGGCAGTGCCGAACGGACAACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000402203.5
ENST00000454349.7
CDS CAA 72 bp CTCTCACTCTGCAGCAGCGCTCCTGTCACTTGTGCGTaGTTTGGGTTTGCTCCAGGTGCTGTGCAGGGAGGA +
Preference number: 6 (lower is better)
Translates to: LSLCSSAPVTCA*FGFAPGAVQGG
Trigger: TCCTCCCTGCACAGCACCTGGAGCAAACCCAAACAACGCACAAGTGACAGGAGCGCTGCTGCAGAGTGAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000402203.5
ENST00000454349.7
CDS CAA 72 bp GTCTGTGTGGCAGCGCTCTCCCACCCCTCAGTTCCTTaGTCAGATTTCCCCTCAGGCCTTGGCACCTCTTCA +
Preference number: 6 (lower is better)
Translates to: VCVAALSHPSVP*SDFPSGLGTSS
Trigger: TGAAGAGGTGCCAAGGCCTGAGGGGAAATCTGACAAAGGAACTGAGGGGTGGGAGAGCGCTGCCACACAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335727.13
ENST00000446273.1
ENST00000454349.7
CDS CAA 90 bp CGTTGTTGGAGGAGGCTCCCGAGCCCCAAGTGGAATTTGCATAATTaGAAGCAGCAGCACCTCCAAGGGTTGAGTCTGGCGCAGTCCCAC +
Preference number: 6 (lower is better)
Translates to: RCWRRLPSPKWNLHN*KQQHLQGLSLAQSH
Trigger: GTGGGACTGCGCCAGACTCAACCCTTGGAGGTGCTGCTGCTTCAAATTATGCAAATTCCACTTGGGGCTCGGGAGCCTCCTCCAACAACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS CAA 90 bp GAGTTCTTGGTCTGTGTGGCAGCGCTCTCCCACCCCTCAGTTCCTTaGTCAGATTTCCCCTCAGGCCTTGGCACCTCTTCAATGTCCCAC +
Preference number: 6 (lower is better)
Translates to: EFLVCVAALSHPSVP*SDFPSGLGTSSMSH
Trigger: GTGGGACATTGAAGAGGTGCCAAGGCCTGAGGGGAAATCTGACAAAGGAACTGAGGGGTGGGAGAGCGCTGCCACACAGACCAAGAACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335727.13
ENST00000446273.1
ENST00000454349.7
CDS CAA 90 bp TGTCTACGTGGGTGTAGGACCGAATACTCACATGTGCAGTGCAGTTaGGGCCTTGGCCGCCTCCTGTTTGGTGCTGTATCGGATCAGGGC +
Preference number: 6 (lower is better)
Translates to: CLRGCRTEYSHVQCS*GLGRLLFGAVSDQG
Trigger: GCCCTGATCCGATACAGCACCAAACAGGAGGCGGCCAAGGCCCAAACTGCACTGCACATGTGAGTATTCGGTCCTACACCCACGTAGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS GCA 72 bp CCCAAGCGGAAGTACCATTATCTGGAGCAGGTGGTGTaGTTTTGCTCCAGACTGGCGCAGTCCCACTCTCAC +
Preference number: 6 (lower is better)
Translates to: PKRKYHYLEQVV*FCSRLAQSHSH
Trigger: GTGAGAGTGGGACTGCGCCAGTCTGGAGCAAAAGCACACCACCTGCTCCAGATAATGGTACTTCCGCTTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301923.13
ENST00000402203.5
CDS GCA 72 bp ACTTGCGCCCGGAGACTGGGAGAAGAATTTAGTGGCTaGACGGGTGTGTGCAGACCTCTCGATTGTGCTGTG +
Preference number: 6 (lower is better)
Translates to: TCARRLGEEFSG*TGVCRPLDCAV
Trigger: CACAGCACAATCGAGAGGTCTGCACACACCCGTGCAGCCACTAAATTCTTCTCCCAGTCTCCGGGCGCAAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000402203.5
ENST00000446273.1
ENST00000454349.7
ENST00000497559.1
CDS CCA 72 bp TCAATGCGTTGGGTACCATGTTGTCCAGATGCGGCTTaGGCCCAACAGGATGAGAGGGCGAGTGCTTCATGC +
Preference number: 6 (lower is better)
Translates to: SMRWVPCCPDAA*AQQDERASASC
Trigger: GCATGAAGCACTCGCCCTCTCATCCTGTTGGGCCCAAGCCGCATCTGGACAACATGGTACCCAACGCATTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000402203.5
ENST00000446273.1
ENST00000454349.7
ENST00000467658.1
CDS CCA 72 bp TTCCCAACACACACATGTGCAGTGCAGTTTGGGCCTTaGCCGCCTCCTGTTTGGTGCTGTATCGGATCAGGG +
Preference number: 6 (lower is better)
Translates to: FPTHTCAVQFGP*PPPVWCCIGSG
Trigger: CCCTGATCCGATACAGCACCAAACAGGAGGCGGCCAAGGCCCAAACTGCACTGCACATGTGTGTGTTGGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000402203.5
ENST00000454349.7
CDS CCA 72 bp GACCGAATACTCACATGTGCAGTGCAGTTTGGGCCTTaGCCGCCTCCTGTTTGGTGCTGTATCGGATCAGGG +
Preference number: 6 (lower is better)
Translates to: DRILTCAVQFGP*PPPVWCCIGSG
Trigger: CCCTGATCCGATACAGCACCAAACAGGAGGCGGCCAAGGCCCAAACTGCACTGCACATGTGAGTATTCGGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS CCA 72 bp GGTGTAGGACCGAATACTCACATGTGCAGTGCAGTTTaGGCCTTGGCCGCCTCCTGTTTGGTGCTGTATCGG +
Preference number: 6 (lower is better)
Translates to: GVGPNTHMCSAV*ALAASCLVLYR
Trigger: CCGATACAGCACCAAACAGGAGGCGGCCAAGGCCCAAACTGCACTGCACATGTGAGTATTCGGTCCTACACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS CAA 72 bp TTCGGCACTGCCACCCTTTTGGCATTGTTGCCACCATaGACTGGTGGCGATGGAGAGCTGCCAATTGGGCTG +
Preference number: 6 (lower is better)
Translates to: FGTATLLALLPP*TGGDGELPIGL
Trigger: CAGCCCAATTGGCAGCTCTCCATCGCCACCAGTCAATGGTGGCAACAATGCCAAAAGGGTGGCAGTGCCGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000402203.5
ENST00000454349.7
CDS CAA 72 bp AGTCCCACTCTCACTCTGCAGCAGCGCTCCTGTCACTaGTGCGTTGTTTGGGTTTGCTCCAGGTGCTGTGCA +
Preference number: 6 (lower is better)
Translates to: SPTLTLQQRSCH*CVVWVCSRCCA
Trigger: TGCACAGCACCTGGAGCAAACCCAAACAACGCACAAGTGACAGGAGCGCTGCTGCAGAGTGAGAGTGGGACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000402203.5
ENST00000454349.7
CDS CAA 72 bp CTGATGCCGATTTACTGGTCATTGGGGTGGGCAGGTTaGGTTCTCGAGGTGCTGGGCCCCCTTGGGAATTCT +
Preference number: 6 (lower is better)
Translates to: LMPIYWSLGWAG*VLEVLGPLGNS
Trigger: AGAATTCCCAAGGGGGCCCAGCACCTCGAGAACCAAACCTGCCCACCCCAATGACCAGTAAATCGGCATCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335727.13
ENST00000446273.1
ENST00000454349.7
CDS CAA 72 bp GGACCGAATACTCACATGTGCAGTGCAGTTTGGGCCTaGGCCGCCTCCTGTTTGGTGCTGTATCGGATCAGG +
Preference number: 6 (lower is better)
Translates to: GPNTHMCSAVWA*AASCLVLYRIR
Trigger: CCTGATCCGATACAGCACCAAACAGGAGGCGGCCAAGGCCCAAACTGCACTGCACATGTGAGTATTCGGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS CAA 72 bp GGGTGTAGGACCGAATACTCACATGTGCAGTGCAGTTaGGGCCTTGGCCGCCTCCTGTTTGGTGCTGTATCG +
Preference number: 6 (lower is better)
Translates to: GCRTEYSHVQCS*GLGRLLFGAVS
Trigger: CGATACAGCACCAAACAGGAGGCGGCCAAGGCCCAAACTGCACTGCACATGTGAGTATTCGGTCCTACACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS CAA 90 bp GGGAGCCTGGGCATTGCCTTGGTTTTCAGGGAGGGGGTGGCCCTTTaGATTGTCCCATGCTCCAGTGCTAGAATTTGGTTGGTTTGGACC +
Preference number: 6 (lower is better)
Translates to: GSLGIALVFREGVAL*IVPCSSARIWLVWT
Trigger: GGTCCAAACCAACCAAATTCTAGCACTGGAGCATGGGACAATCAAAAGGGCCACCCCCTCCCTGAAAACCAAGGCAATGCCCAGGCTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335727.13
ENST00000446273.1
ENST00000454349.7
CDS CAA 90 bp TGCTCCAGACTGATGCCGATTTACTGGTCATTGGGGTGGGCAGGTTaGGTTCTCGAGGTGCTGGGCCCCCTTGGGAATTCTTATCCCACA +
Preference number: 6 (lower is better)
Translates to: CSRLMPIYWSLGWAG*VLEVLGPLGNSYPT
Trigger: TGTGGGATAAGAATTCCCAAGGGGGCCCAGCACCTCGAGAACCAAACCTGCCCACCCCAATGACCAGTAAATCGGCATCAGTCTGGAGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000446273.1
ENST00000454349.7
CDS TCA 72 bp GAGATTGTGAAGAACCAGCCAGTAACTAGGACGAACTaGGCCACCATCACTCCAGGTAGAGGCCGAGGCGAG +
Preference number: 6 (lower is better)
Translates to: EIVKNQPVTRTN*ATITPGRGRGE
Trigger: CTCGCCTCGGCCTCTACCTGGAGTGATGGTGGCTCAGTTCGTCCTAGTTACTGGCTGGTTCTTCACAATCTC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000402203.5
ENST00000446273.1
ENST00000454349.7
CDS GCA 72 bp CCCTTTGGTTTGAAGGTCTGGGAGCCCCACATTCAATaGGTTGGGTACCATGTTGTCCAGATGCGGCTTGGG +
Preference number: 6 (lower is better)
Translates to: PFGLKVWEPHIQ*VGYHVVQMRLG
Trigger: CCCAAGCCGCATCTGGACAACATGGTACCCAACGCATTGAATGTGGGGCTCCCAGACCTTCAAACCAAAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000402203.5
ENST00000446273.1
ENST00000454349.7
ENST00000467658.1
CDS GCA 72 bp TCCAGAGACTGTGTCAGTTCCAGAAGGCCCCCTAGCTaGACCCCAAGATCCAACACTCCCAGTCTTTCGATC +
Preference number: 6 (lower is better)
Translates to: SRDCVSSRRPPS*TPRSNTPSLSI
Trigger: GATCGAAAGACTGGGAGTGTTGGATCTTGGGGTGCAGCTAGGGGGCCTTCTGGAACTGACACAGTCTCTGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335727.13
ENST00000446273.1
ENST00000454349.7
CDS GCA 72 bp GATTGGGCTGGCGTCCACCTCCCCACCCCTGATCCTTaGTGGGATTCTCATTCCAAGAGGAAGGTGTCTTTT +
Preference number: 6 (lower is better)
Translates to: DWAGVHLPTPDP*WDSHSKRKVSF
Trigger: AAAAGACACCTTCCTCTTGGAATGAGAATCCCAGCAAGGATCAGGGGTGGGGAGGTGGACGCCAGCCCAATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335727.13
ENST00000446273.1
ENST00000454349.7
CDS CCA 72 bp GATGGAGAGCTGCCAATTGGGCTGGCGGCCGTTGGTTaGCTTAAACTTGGTTTCGTCACTTCGGGCACTTTG +
Preference number: 6 (lower is better)
Translates to: DGELPIGLAAVG*LKLGFVTSGTL
Trigger: CAAAGTGCCCGAAGTGACGAAACCAAGTTTAAGCCAACCAACGGCCGCCAGCCCAATTGGCAGCTCTCCATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000402203.5
ENST00000454349.7
CDS CCA 72 bp TGGTTTGAAGGTCTGGGAGCCCCACATTCAATGCGTTaGGTACCATGTTGTCCAGATGCGGCTTGGGCCCAA +
Preference number: 6 (lower is better)
Translates to: WFEGLGAPHSMR*VPCCPDAAWAQ
Trigger: TTGGGCCCAAGCCGCATCTGGACAACATGGTACCCAACGCATTGAATGTGGGGCTCCCAGACCTTCAAACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000402203.5
ENST00000446273.1
ENST00000454349.7
ENST00000467658.1
CDS CCA 72 bp GCCGCCAGAGCTGAAGCCAGAACCATATCCAGGTATTaGCCCTTTGGTTTGAAGGTCTGGGAGCCCCACATT +
Preference number: 6 (lower is better)
Translates to: AARAEARTISRY*PFGLKVWEPHI
Trigger: AATGTGGGGCTCCCAGACCTTCAAACCAAAGGGCCAATACCTGGATATGGTTCTGGCTTCAGCTCTGGCGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000402203.5
ENST00000446273.1
ENST00000454349.7
CDS CCA 72 bp TCACCAGGTAGTAAAGGAGCAGGGCTGCCCATCCTATaGGGATCTTCCACCGTTGGGACTCCCCATAAGCTA +
Preference number: 6 (lower is better)
Translates to: SPGSKGAGLPIL*GSSTVGTPHKL
Trigger: TAGCTTATGGGGAGTCCCAACGGTGGAAGATCCCCATAGGATGGGCAGCCCTGCTCCTTTACTACCTGGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000402203.5
ENST00000454349.7
CDS CCA 72 bp CAGTGCTTTGACCTCCAACTTCACTTCCTGTGGAGCTaGAAGATCTTCCCCAACAGGGAGCCTGGGCATTGC +
Preference number: 6 (lower is better)
Translates to: QCFDLQLHFLWS*KIFPNREPGHC
Trigger: GCAATGCCCAGGCTCCCTGTTGGGGAAGATCTTCCAGCTCCACAGGAAGTGAAGTTGGAGGTCAAAGCACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335727.13
ENST00000446273.1
ENST00000454349.7
CDS CAA 72 bp TTTCCCAACACACACATGTGCAGTGCAGTTTGGGCCTaGGCCGCCTCCTGTTTGGTGCTGTATCGGATCAGG +
Preference number: 6 (lower is better)
Translates to: FPNTHMCSAVWA*AASCLVLYRIR
Trigger: CCTGATCCGATACAGCACCAAACAGGAGGCGGCCAAGGCCCAAACTGCACTGCACATGTGTGTGTTGGGAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000402203.5
ENST00000454349.7
CDS CAA 72 bp AGGAGGCTCCCGAGCCCCAAGTGGAATTTGCATAATTaGAAGCAGCAGCACCTCCAAGGGTTGAGTCTGGCG +
Preference number: 6 (lower is better)
Translates to: RRLPSPKWNLHN*KQQHLQGLSLA
Trigger: CGCCAGACTCAACCCTTGGAGGTGCTGCTGCTTCAAATTATGCAAATTCCACTTGGGGCTCGGGAGCCTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS CAA 72 bp TGCTTTTGCTCCAGACTGATGCCGATTTACTGGTCATaGGGGTGGGCAGGTTTGGTTCTCGAGGTGCTGGGC +
Preference number: 6 (lower is better)
Translates to: CFCSRLMPIYWS*GWAGLVLEVLG
Trigger: GCCCAGCACCTCGAGAACCAAACCTGCCCACCCCAATGACCAGTAAATCGGCATCAGTCTGGAGCAAAAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000446273.1
ENST00000454349.7
CDS CAA 72 bp CAAACCATGACTACCGCCTTGTCTAGCAGCGAAGTTTaGGGGGTTGAGCCCTGTGCCGATTGCTCCAAGGCT +
Preference number: 6 (lower is better)
Translates to: QTMTTALSSSEV*GVEPCADCSKA
Trigger: AGCCTTGGAGCAATCGGCACAGGGCTCAACCCCCAAAACTTCGCTGCTAGACAAGGCGGTAGTCATGGTTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000454349.7
CDS GCA 72 bp ATGCTCCTGTATCATCCATCTCGCCCCACCCAGGACTaGTTTCATTTGGCTCACCCCAAGCGGAAGTACCAT +
Preference number: 6 (lower is better)
Translates to: MLLYHPSRPTQD*FHLAHPKRKYH
Trigger: ATGGTACTTCCGCTTGGGGTGAGCCAAATGAAAGCAGTCCTGGGTGGGGCGAGATGGATGATACAGGAGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301923.13
ENST00000402203.5
ENST00000446273.1
ENST00000454349.7
CDS GCA 72 bp GCTGCACGGGTGTGTGCAGACCTCTCGATTGTGCTGTaGTGTTTCCAAACAAACCATGACTACCGCCCTTCT +
Preference number: 6 (lower is better)
Translates to: AARVCADLSIVL*CFQTNHDYRPS
Trigger: AGAAGGGCGGTAGTCATGGTTTGTTTGGAAACAGCACAGCACAATCGAGAGGTCTGCACACACCCGTGCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000402203.5
ENST00000446273.1
ENST00000497559.1
CDS GCA 72 bp CCCAAGATCCAACACTCCCAGTCTTTCGATCTCCAGTaGTTTGTGAAGGGGCATCAGTGCTCCTGGAGGTGT +
Preference number: 6 (lower is better)
Translates to: PKIQHSQSFDLQ*FVKGHQCSWRC
Trigger: ACACCTCCAGGAGCACTGATGCCCCTTCACAAAGCACTGGAGATCGAAAGACTGGGAGTGTTGGATCTTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335727.13
ENST00000446273.1
ENST00000454349.7
CDS GCA 72 bp TTTGTCTACGTGGGTGTAGGACCGAATACTCACATGTaGAGTGCAGTTTGGGCCTTGGCCGCCTCCTGTTTG +
Preference number: 6 (lower is better)
Translates to: FVYVGVGPNTHM*SAVWALAASCL
Trigger: CAAACAGGAGGCGGCCAAGGCCCAAACTGCACTGCACATGTGAGTATTCGGTCCTACACCCACGTAGACAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS GCA 72 bp GCTGCACGGGTGTGTGCAGACCTCTCGATTGTGCTGTaGTGTTTCCAAACAAACCATGACTACCGCCTTGTC +
Preference number: 6 (lower is better)
Translates to: AARVCADLSIVL*CFQTNHDYRLV
Trigger: GACAAGGCGGTAGTCATGGTTTGTTTGGAAACAGCACAGCACAATCGAGAGGTCTGCACACACCCGTGCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454349.7
CDS CCA 72 bp TTGGCAGGTAACCAGCTATCACCAGCAGGACCCGTATaGCCACCCAGTGTGTCACCAGGGATGATATCAAAC +
Preference number: 6 (lower is better)
Translates to: LAGNQLSPAGPV*PPSVSPGMISN
Trigger: GTTTGATATCATCCCTGGTGACACACTGGGTGGCCATACGGGTCCTGCTGGTGATAGCTGGTTACCTGCCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000402203.5
ENST00000446273.1
ENST00000454349.7
CDS CCA 72 bp TCCTGTTTGGTGCTGTATCGGATCAGGGCAGTGCCCTaGGTTAGATTCAGATGGAATGTCAGCAGTGGGCCA +
Preference number: 6 (lower is better)
Translates to: SCLVLYRIRAVP*VRFRWNVSSGP
Trigger: TGGCCCACTGCTGACATTCCATCTGAATCTAACCCAGGGCACTGCCCTGATCCGATACAGCACCAAACAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000402203.5
ENST00000446273.1
ENST00000454349.7
CDS CCA 72 bp TTGTTCCCTTCACCCCATTTGTTGTCATTAGAGTCCTaGGGGCCAAAGTTCCAGGACCCACCCGTAGACCTG +
Preference number: 6 (lower is better)
Translates to: LFPSPHLLSLES*GPKFQDPPVDL
Trigger: CAGGTCTACGGGTGGGTCCTGGAACTTTGGCCCCCAGGACTCTAATGACAACAAATGGGGTGAAGGGAACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335727.13
ENST00000446273.1
ENST00000454349.7
CDS CCA 72 bp ATTTGGAATCTGATGCCGATTTACTGGTCATTGGGGTaGGCAGGTTTGGTTCTCGAGGTGCTGGGCCCCCTT +
Preference number: 6 (lower is better)
Translates to: IWNLMPIYWSLG*AGLVLEVLGPL
Trigger: AAGGGGGCCCAGCACCTCGAGAACCAAACCTGCCCACCCCAATGACCAGTAAATCGGCATCAGATTCCAAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000335727.13
CDS CAA 72 bp GGCCCCACATTGAAAAGACCTGGACTCAGGCCACTGTaGGGAAACTGCTTGAGCATTGAGGCAGAAACCTGG +
Preference number: 6 (lower is better)
Translates to: GPTLKRPGLRPL*GNCLSIEAETW
Trigger: CCAGGTTTCTGCCTCAATGCTCAAGCAGTTTCCCAACAGTGGCCTGAGTCCAGGTCTTTTCAATGTGGGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000402203.5
ENST00000446273.1
ENST00000454349.7
CDS CAA 72 bp CGTTGTTGGAGGAGGCTCCCGAGCCCCAAGTGGAATTaGCATAATTTGAAGCAGCAGCACCTCCAAGGGTTG +
Preference number: 6 (lower is better)
Translates to: RCWRRLPSPKWN*HNLKQQHLQGL
Trigger: CAACCCTTGGAGGTGCTGCTGCTTCAAATTATGCAAATTCCACTTGGGGCTCGGGAGCCTCCTCCAACAACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS CAA 72 bp ACCCCTCAGTTCCTTTGTCAGATTTCCCCTCAGGCCTaGGCACCTCTTCAATGTCCCACACTGTGTCCTGCT +
Preference number: 6 (lower is better)
Translates to: TPQFLCQISPQA*APLQCPTLCPA
Trigger: AGCAGGACACAGTGTGGGACATTGAAGAGGTGCCAAGGCCTGAGGGGAAATCTGACAAAGGAACTGAGGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335727.13
ENST00000446273.1
ENST00000454349.7
CDS TCA 72 bp GTCCTGCTTAATTTGAGTTTGGCCCCAGCCAGTGTTTaGGAGCACCCTGGGGTCCAAATCAGTTCGGCTCAA +
Preference number: 6 (lower is better)
Translates to: VLLNLSLAPASV*EHPGVQISSAQ
Trigger: TTGAGCCGAACTGATTTGGACCCCAGGGTGCTCTCAAACACTGGCTGGGGCCAAACTCAAATTAAGCAGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335727.13
ENST00000446273.1
ENST00000454349.7
CDS GCA 72 bp CTGCTGCTGTTGCTGCTGCTGCAAGAGAAGCTGACATaGCAACTGAAACTGGGGAATTTGTGGAAGCTGGCT +
Preference number: 6 (lower is better)
Translates to: LLLLLLLQEKLT*QLKLGNLWKLA
Trigger: AGCCAGCTTCCACAAATTCCCCAGTTTCAGTTGGCATGTCAGCTTCTCTTGCAGCAGCAGCAACAGCAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000402203.5
ENST00000446273.1
ENST00000454349.7
CDS GCA 72 bp CGACCGACGGCCAGAGTTATGACTGTCACTACTTCCTaGTTTGTGGTTGCTTCCAGTGCTTTGACCTCCAAC +
Preference number: 6 (lower is better)
Translates to: RPTARVMTVTTS*FVVASSALTSN
Trigger: GTTGGAGGTCAAAGCACTGGAAGCAACCACAAAGCAGGAAGTAGTGACAGTCATAACTCTGGCCGTCGGTCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335727.13
ENST00000446273.1
ENST00000454349.7
CDS CAA 72 bp CCAGAACTTGCAGACTGGCACTGGCTCCCTTTTCCTTaGTTACTAGTGGTGCTTCCTGGCAGAGTGCTCTTC +
Preference number: 6 (lower is better)
Translates to: PELADWHWLPFP*LLVVLPGRVLF
Trigger: GAAGAGCACTCTGCCAGGAAGCACCACTAGTAACAAAGGAAAAGGGAGCCAGTGCCAGTCTGCAAGTTCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS CAA 72 bp GGTGGGCAGGTTTGGTTCTCGAGGTGCTGGGCCCCCTaGGGAATTCTTATCCCACAGATTCACATTCTTGTA +
Preference number: 6 (lower is better)
Translates to: GGQVWFSRCWAP*GILIPQIHILV
Trigger: TACAAGAATGTGAATCTGTGGGATAAGAATTCCCAAGGGGGCCCAGCACCTCGAGAACCAAACCTGCCCACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000335727.13
ENST00000446273.1
ENST00000454349.7
CDS CAA 90 bp ATTTGGAATCTGATGCCGATTTACTGGTCATTGGGGTGGGCAGGTTaGGTTCTCGAGGTGCTGGGCCCCCTTGGGAATTCTTATCCCACA +
Preference number: 6 (lower is better)
Translates to: IWNLMPIYWSLGWAG*VLEVLGPLGNSYPT
Trigger: TGTGGGATAAGAATTCCCAAGGGGGCCCAGCACCTCGAGAACCAAACCTGCCCACCCCAATGACCAGTAAATCGGCATCAGATTCCAAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000335727.13
CDS CAA 90 bp CTTCCTGGCAGAGTGCTCTTCTCAGAGCCAGGGTTCGAGGCACTGTaGTTATCGGTGGTGTTTTCGGAAGAAGATTCAGTGTCTTTGCTG +
Preference number: 6 (lower is better)
Translates to: LPGRVLFSEPGFEAL*LSVVFSEEDSVSLL
Trigger: CAGCAAAGACACTGAATCTTCTTCCGAAAACACCACCGATAACAACAGTGCCTCGAACCCTGGCTCTGAGAAGAGCACTCTGCCAGGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS TCA 72 bp AAGCCAGAACCATATCCAGGTATTGGCCCTTTGGTTTaGAGGTCTGGGAGCCCCACATTCAATGCGTTGGGT +
Preference number: 6 (lower is better)
Translates to: KPEPYPGIGPLV*RSGSPTFNALG
Trigger: ACCCAACGCATTGAATGTGGGGCTCCCAGACCTTCAAACCAAAGGGCCAATACCTGGATATGGTTCTGGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000402203.5
ENST00000446273.1
ENST00000454349.7
CDS TCA 72 bp AACTCATCAGACCCAGTCGGCTGTTTCCATTCTCCCTaGGAGACCCCAGATGTCATTTTGTTCCCTTCACCC +
Preference number: 6 (lower is better)
Translates to: NSSDPVGCFHSP*ETPDVILFPSP
Trigger: GGGTGAAGGGAACAAAATGACATCTGGGGTCTCTCAGGGAGAATGGAAACAGCCGACTGGGTCTGATGAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335727.13
ENST00000446273.1
ENST00000454349.7
CDS GCA 72 bp AGACTGGGAGAAGAATTTAGTGGCTGCACGGGTGTGTaGAGACCTCTCGATTGTGCTGTGCTGTTTCCAAAC +
Preference number: 6 (lower is better)
Translates to: RLGEEFSGCTGV*RPLDCAVLFPN
Trigger: GTTTGGAAACAGCACAGCACAATCGAGAGGTCTGCACACACCCGTGCAGCCACTAAATTCTTCTCCCAGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000402203.5
ENST00000446273.1
ENST00000454349.7
ENST00000497559.1
CDS GCA 72 bp AATCCTCCCACCCACCTTTTGAAGCTAGGCTTGCATTaGCACCATTACCCCAAGTCCCGATTTCATTCTGCC +
Preference number: 6 (lower is better)
Translates to: NPPTHLLKLGLH*HHYPKSRFHSA
Trigger: GGCAGAATGAAATCGGGACTTGGGGTAATGGTGGCAATGCAAGCCTAGCTTCAAAAGGTGGGTGGGAGGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335727.13
ENST00000446273.1
ENST00000454349.7
CDS GCA 72 bp CCCAAGCGGAAGTACCATTATCTGGAGCAGGTGGTGTaGTTTTGCTCCAGACTGATGCCGATTTACTGGTCA +
Preference number: 6 (lower is better)
Translates to: PKRKYHYLEQVV*FCSRLMPIYWS
Trigger: TGACCAGTAAATCGGCATCAGTCTGGAGCAAAAGCACACCACCTGCTCCAGATAATGGTACTTCCGCTTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000446273.1
ENST00000454349.7
CDS CCA 72 bp GAATTAGACCCTGTGGTGTTATCCCGCAGCAGTTGGTaGTCAGTATCTACAATGGGAGATGTGGCTGTACCC +
Preference number: 6 (lower is better)
Translates to: ELDPVVLSRSSW*SVSTMGDVAVP
Trigger: GGGTACAGCCACATCTCCCATTGTAGATACTGACCACCAACTGCTGCGGGATAACACCACAGGGTCTAATTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000402203.5
ENST00000446273.1
ENST00000454349.7
CDS CAA 72 bp CAATCCTCCCACCCACCTTTTGAAGCTAGGCTTGCATaGCCACCATTACCCCAAGTCCCGATTTCATTCTGC +
Preference number: 6 (lower is better)
Translates to: QSSHPPFEARLA*PPLPQVPISFC
Trigger: GCAGAATGAAATCGGGACTTGGGGTAATGGTGGCAATGCAAGCCTAGCTTCAAAAGGTGGGTGGGAGGATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335727.13
ENST00000446273.1
ENST00000454349.7
CDS CAA 72 bp GGGAGAGCAGGGAGCCTCATCCCCAAGGCACCCATCTaGATTGGAGAAAGGCAAAGTCAGCTTCTCAAAATA +
Preference number: 6 (lower is better)
Translates to: GRAGSLIPKAPI*IGERQSQLLKI
Trigger: TATTTTGAGAAGCTGACTTTGCCTTTCTCCAATCAAGATGGGTGCCTTGGGGATGAGGCTCCCTGCTCTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454349.7
CDS CAA 90 bp CTGGCATTGCTGGATTTACTTCCGATTTTATTTGTTGGTGGAGATTaGGCAGGTAACCAGCTATCACCAGCAGGACCCGTATGGCCACCC +
Preference number: 6 (lower is better)
Translates to: LALLDLLPILFVGGD*AGNQLSPAGPVWPP
Trigger: GGGTGGCCATACGGGTCCTGCTGGTGATAGCTGGTTACCTGCCAAATCTCCACCAACAAATAAAATCGGAAGTAAATCCAGCAATGCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000402203.5
ENST00000446273.1
ENST00000454349.7
CDS CAA 90 bp CTGGAGGCCAACTGGCATTGCTGGATTTACTTCCGATTTTATTTGTaGGTGGAGATTTGGCAGGTAACCAGCTATCACCAGCAGGACCCG +
Preference number: 6 (lower is better)
Translates to: LEANWHCWIYFRFYL*VEIWQVTSYHQQDP
Trigger: CGGGTCCTGCTGGTGATAGCTGGTTACCTGCCAAATCTCCACCAACAAATAAAATCGGAAGTAAATCCAGCAATGCCAGTTGGCCTCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000402203.5
ENST00000446273.1
ENST00000454349.7
CDS CAA 90 bp GGTCATTGGGGTGGGCAGGTTTGGTTCTCGAGGTGCTGGGCCCCCTaGGGAATTCTTATCCCACAGATTCACATTCTTGTAGTTATAACT +
Preference number: 6 (lower is better)
Translates to: GHWGGQVWFSRCWAP*GILIPQIHILVVIT
Trigger: AGTTATAACTACAAGAATGTGAATCTGTGGGATAAGAATTCCCAAGGGGGCCCAGCACCTCGAGAACCAAACCTGCCCACCCCAATGACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335727.13
ENST00000446273.1
ENST00000454349.7
CDS TCA 72 bp TGGCAATTTGTTGAGGAGATAACTGGGGCCCCACATTaGAAAGACCTGGACTCAGGCCACTGTTGGGAAACT +
Preference number: 6 (lower is better)
Translates to: WQFVEEITGAPH*KDLDSGHCWET
Trigger: AGTTTCCCAACAGTGGCCTGAGTCCAGGTCTTTTCAATGTGGGGCCCCAGTTATCTCCTCAACAAATTGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000402203.5
ENST00000446273.1
ENST00000454349.7
CDS TCA 72 bp TTACCAGAACCATATCCAGGTATTGGCCCTTTGGTTTaGAGGTCTGGGAGCCCCACATTCAATGCGTTGGGT +
Preference number: 6 (lower is better)
Translates to: LPEPYPGIGPLV*RSGSPTFNALG
Trigger: ACCCAACGCATTGAATGTGGGGCTCCCAGACCTTCAAACCAAAGGGCCAATACCTGGATATGGTTCTGGTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467658.1
CDS GCA 72 bp TGGGTTAGATTCAGATGGAATGTCAGCAGTGGGCCATaGTGCATGCAGATCGTTCTCAAGGTTGACCCATCA +
Preference number: 6 (lower is better)
Translates to: WVRFRWNVSSGP*CMQIVLKVDPS
Trigger: TGATGGGTCAACCTTGAGAACGATCTGCATGCAGCATGGCCCACTGCTGACATTCCATCTGAATCTAACCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000402203.5
ENST00000446273.1
ENST00000454349.7
CDS GCA 72 bp TCAGCAGCTGCCAGAATACTCACGGGTGCATCTTCATaGATGTTTGTCTACGTGGGTGTAGGACCGAATACT +
Preference number: 6 (lower is better)
Translates to: SAAARILTGASS*MFVYVGVGPNT
Trigger: AGTATTCGGTCCTACACCCACGTAGACAAACATGCATGAAGATGCACCCGTGAGTATTCTGGCAGCTGCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446273.1
CDS CCA 72 bp CGGTGGTGTTTTCGGAAGAAGATTCAGTGTCTTTGCTaGCAATACAAGGCCACTCTTCCATGTCAGACCCGT +
Preference number: 6 (lower is better)
Translates to: RWCFRKKIQCLC*QYKATLPCQTR
Trigger: ACGGGTCTGACATGGAAGAGTGGCCTTGTATTGCCAGCAAAGACACTGAATCTTCTTCCGAAAACACCACCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS CCA 72 bp TCTCAGAGCCAGGGTTCGAGGCACTGTTGTTATCGGTaGTGTTTTCGGAAGAAGATTCAGTGTCTTTGCTGG +
Preference number: 6 (lower is better)
Translates to: SQSQGSRHCCYR*CFRKKIQCLCW
Trigger: CCAGCAAAGACACTGAATCTTCTTCCGAAAACACCACCGATAACAACAGTGCCTCGAACCCTGGCTCTGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS CCA 72 bp TGCCCCTTTCCTAGAAGTTCCTTCTTGGACCAGTGCTaGCCAGGCAGATGGGTTGCTATTTGGGTTAAAGTT +
Preference number: 6 (lower is better)
Translates to: CPFPRSSFLDQC*PGRWVAIWVKV
Trigger: AACTTTAACCCAAATAGCAACCCATCTGCCTGGCCAGCACTGGTCCAAGAAGGAACTTCTAGGAAAGGGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335727.13
ENST00000446273.1
ENST00000454349.7
CDS CAA 72 bp GGAAGAATTAGACCCTGTGGTGTTATCCCGCAGCAGTaGGTGGTCAGTATCTACAATGGGAGATGTGGCTGT +
Preference number: 6 (lower is better)
Translates to: GRIRPCGVIPQQ*VVSIYNGRCGC
Trigger: ACAGCCACATCTCCCATTGTAGATACTGACCACCAACTGCTGCGGGATAACACCACAGGGTCTAATTCTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000402203.5
ENST00000446273.1
ENST00000454349.7
CDS CAA 72 bp GGTCACGAGGTCAGAGTTGAAAGTTCTAAGTTCAGATaGAATCCGACCCTCCTCCCAGAAGGTCACCAGGTA +
Preference number: 6 (lower is better)
Translates to: GHEVRVESSKFR*NPTLLPEGHQV
Trigger: TACCTGGTGACCTTCTGGGAGGAGGGTCGGATTCAATCTGAACTTAGAACTTTCAACTCTGACCTCGTGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000402203.5
ENST00000454349.7
CDS CAA 72 bp AGAGTGCTCTTCTCAGAGCCAGGGTTCGAGGCACTGTaGTTATCGGTGGTGTTTTCGGAAGAAGATTCAGTG +
Preference number: 6 (lower is better)
Translates to: RVLFSEPGFEAL*LSVVFSEEDSV
Trigger: CACTGAATCTTCTTCCGAAAACACCACCGATAACAACAGTGCCTCGAACCCTGGCTCTGAGAAGAGCACTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS CAA 72 bp GTCACTACTTCCTGCTTTGTGGTTGCTTCCAGTGCTTaGACCTCCAACTTCACTTCCTGTGGAGCTGGAAGA +
Preference number: 6 (lower is better)
Translates to: VTTSCFVVASSA*TSNFTSCGAGR
Trigger: TCTTCCAGCTCCACAGGAAGTGAAGTTGGAGGTCAAAGCACTGGAAGCAACCACAAAGCAGGAAGTAGTGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335727.13
ENST00000446273.1
ENST00000454349.7
CDS CAA 90 bp GTTATGACTGTCACTACTTCCTGCTTTGTGGTTGCTTCCAGTGCTTaGACCTCCAACTTCACTTCCTGTGGAGCTGGAAGATCTTCCCCA +
Preference number: 6 (lower is better)
Translates to: VMTVTTSCFVVASSA*TSNFTSCGAGRSSP
Trigger: TGGGGAAGATCTTCCAGCTCCACAGGAAGTGAAGTTGGAGGTCAAAGCACTGGAAGCAACCACAAAGCAGGAAGTAGTGACAGTCATAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335727.13
ENST00000446273.1
ENST00000454349.7
CDS GCA 72 bp GTTAGATTCAGATGGAATGTCAGCAGTGGGCCATGCTaGATGCAGATCGTTCTCAAGGTTGACCCATCAATC +
Preference number: 6 (lower is better)
Translates to: VRFRWNVSSGPC*MQIVLKVDPSI
Trigger: GATTGATGGGTCAACCTTGAGAACGATCTGCATGCAGCATGGCCCACTGCTGACATTCCATCTGAATCTAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000402203.5
ENST00000446273.1
ENST00000454349.7
CDS CCA 72 bp CCCACTATCTGTGGTTCCCATGTCTTTGGAATTAGGTaGACGGAACCCAGATCGATCCTTCCTCATGATATC +
Preference number: 6 (lower is better)
Translates to: PTICGSHVFGIR*TEPRSILPHDI
Trigger: GATATCATGAGGAAGGATCGATCTGGGTTCCGTCCACCTAATTCCAAAGACATGGGAACCACAGATAGTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000402203.5
ENST00000446273.1
ENST00000454349.7
ENST00000497559.1
CDS CCA 72 bp GAGAAGCTGACATGCCAACTGAAACTGGGGAATTTGTaGAAGCTGGCTCAGCATGGCAATTTGTTGAGGAGA +
Preference number: 6 (lower is better)
Translates to: EKLTCQLKLGNL*KLAQHGNLLRR
Trigger: TCTCCTCAACAAATTGCCATGCTGAGCCAGCTTCCACAAATTCCCCAGTTTCAGTTGGCATGTCAGCTTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000402203.5
ENST00000446273.1
ENST00000454349.7
CDS CCA 72 bp GAAGAATTAGACCCTGTGGTGTTATCCCGCAGCAGTTaGTGGTCAGTATCTACAATGGGAGATGTGGCTGTA +
Preference number: 6 (lower is better)
Translates to: EELDPVVLSRSS*WSVSTMGDVAV
Trigger: TACAGCCACATCTCCCATTGTAGATACTGACCACCAACTGCTGCGGGATAACACCACAGGGTCTAATTCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000402203.5
ENST00000446273.1
ENST00000454349.7
CDS CCA 72 bp AAGGTGTCTTTTCATCAGGTCGTCCTCCTCCCCAGTTaGAAGAGTTGTTGTTCTTGTAGTCATTCCAGCCTC +
Preference number: 6 (lower is better)
Translates to: KVSFHQVVLLPS*KSCCSCSHSSL
Trigger: GAGGCTGGAATGACTACAAGAACAACAACTCTTCCAACTGGGGAGGAGGACGACCTGATGAAAAGACACCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335727.13
ENST00000446273.1
ENST00000454349.7
CDS CCA 72 bp ACAACTTACCAGAACCATATCCAGGTATTGGCCCTTTaGTTTGAAGGTCTGGGAGCCCCACATTCAATGCGT +
Preference number: 6 (lower is better)
Translates to: TTYQNHIQVLAL*FEGLGAPHSMR
Trigger: ACGCATTGAATGTGGGGCTCCCAGACCTTCAAACCAAAGGGCCAATACCTGGATATGGTTCTGGTAAGTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467658.1
CDS CCA 72 bp CTCTACCAACAACTTACCAGAACCATATCCAGGTATTaGCCCTTTGGTTTGAAGGTCTGGGAGCCCCACATT +
Preference number: 6 (lower is better)
Translates to: LYQQLTRTISRY*PFGLKVWEPHI
Trigger: AATGTGGGGCTCCCAGACCTTCAAACCAAAGGGCCAATACCTGGATATGGTTCTGGTAAGTTGTTGGTAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467658.1
CDS CAA 72 bp CAAGAGAAGCTGACATGCCAACTGAAACTGGGGAATTaGTGGAAGCTGGCTCAGCATGGCAATTTGTTGAGG +
Preference number: 6 (lower is better)
Translates to: QEKLTCQLKLGN*WKLAQHGNLLR
Trigger: CCTCAACAAATTGCCATGCTGAGCCAGCTTCCACAAATTCCCCAGTTTCAGTTGGCATGTCAGCTTCTCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000402203.5
ENST00000446273.1
ENST00000454349.7
CDS CAA 90 bp TGGAGAGATGAGTGGGGTTGTGTCCTATGGGATCTGGGGACCATGTaGATTTGTAATCAGGGAACTTTGCTGAAGTGCTATGAACGTTGG +
Preference number: 6 (lower is better)
Translates to: WRDEWGCVLWDLGTM*ICNQGTLLKCYERW
Trigger: CCAACGTTCATAGCACTTCAGCAAAGTTCCCTGATTACAAATCAACATGGTCCCCAGATCCCATAGGACACAACCCCACTCATCTCTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000402203.5
ENST00000446273.1
ENST00000454349.7
CDS CAA 90 bp GCACTGTTGTTATCGGTGGTGTTTTCGGAAGAAGATTCAGTGTCTTaGCTGGCAATACAAGGCCACTCTTCCATGTCAGACCCGTCTACA +
Preference number: 6 (lower is better)
Translates to: ALLLSVVFSEEDSVS*LAIQGHSSMSDPST
Trigger: TGTAGACGGGTCTGACATGGAAGAGTGGCCTTGTATTGCCAGCAAAGACACTGAATCTTCTTCCGAAAACACCACCGATAACAACAGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS CAA 90 bp ATTCTGGAGGCCAACTGGCATTGCTGGATTTACTTCCGATTTTATTaGTTGGTGGAGATTTGGCAGGTAACCAGCTATCACCAGCAGGAC +
Preference number: 6 (lower is better)
Translates to: ILEANWHCWIYFRFY*LVEIWQVTSYHQQD
Trigger: GTCCTGCTGGTGATAGCTGGTTACCTGCCAAATCTCCACCAACAAATAAAATCGGAAGTAAATCCAGCAATGCCAGTTGGCCTCCAGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000402203.5
ENST00000446273.1
ENST00000454349.7
CDS TCA 72 bp AAGTTGCTGAAGCCAGAGCCAGGTCCAATTCTATCCTaGCCACTCACATTCCTCCAATTTCCTAGTCCATTG +
Preference number: 6 (lower is better)
Translates to: KLLKPEPGPILS*PLTFLQFPSPL
Trigger: CAATGGACTAGGAAATTGGAGGAATGTGAGTGGTCAGGATAGAATTGGACCTGGCTCTGGCTTCAGCAACTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335727.13
ENST00000446273.1
ENST00000454349.7
CDS GCA 72 bp TCTCTTGTTTGCTTTCTTCACCAGGAGGTGGAGTCTTaGCATGCCCTTCCATTACAAAATCCTCCTGTTCCA +
Preference number: 6 (lower is better)
Translates to: SLVCFLHQEVES*HALPLQNPPVP
Trigger: TGGAACAGGAGGATTTTGTAATGGAAGGGCATGGCAAGACTCCACCTCCTGGTGAAGAAAGCAAACAAGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301923.13
ENST00000402203.5
CDS GCA 72 bp GCACTCCTGGTTGGAATTCTGGAGGCCAACTGGCATTaGTGGATTTACTTCCGATTTTATTTGTTGGTGGAG +
Preference number: 6 (lower is better)
Translates to: ALLVGILEANWH*WIYFRFYLLVE
Trigger: CTCCACCAACAAATAAAATCGGAAGTAAATCCAGCAATGCCAGTTGGCCTCCAGAATTCCAACCAGGAGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000402203.5
ENST00000446273.1
ENST00000454349.7
CDS GCA 72 bp TATCGGTGGTGTTTTCGGAAGAAGATTCAGTGTCTTTaGTGGCAATACAAGGCCACTCTTCCATGTCAGACC +
Preference number: 6 (lower is better)
Translates to: YRWCFRKKIQCL*WQYKATLPCQT
Trigger: GGTCTGACATGGAAGAGTGGCCTTGTATTGCCAGCAAAGACACTGAATCTTCTTCCGAAAACACCACCGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS GCA 72 bp CTGTTCCCTGGATGTCTGACCTACTGTGCTAACCTGTaGACTGGAATTACTATTATCTGTTTCCAATGCCCC +
Preference number: 6 (lower is better)
Translates to: LFPGCLTYCANL*TGITIICFQCP
Trigger: GGGGCATTGGAAACAGATAATAGTAATTCCAGTGCACAGGTTAGCACAGTAGGTCAGACATCCAGGGAACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335727.13
ENST00000446273.1
ENST00000454349.7
CDS CCA 72 bp ACATCTTGTTGGAGAGATGAGTGGGGTTGTGTCCTATaGGATCTGGGGACCATGTTGATTTGTAATCAGGGA +
Preference number: 6 (lower is better)
Translates to: TSCWRDEWGCVL*DLGTMLICNQG
Trigger: TCCCTGATTACAAATCAACATGGTCCCCAGATCCCATAGGACACAACCCCACTCATCTCTCCAACAAGATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000402203.5
ENST00000446273.1
ENST00000454349.7
CDS CAA 72 bp GGCACTCCTGGTTGGAATTCTGGAGGCCAACTGGCATaGCTGGATTTACTTCCGATTTTATTTGTTGGTGGA +
Preference number: 6 (lower is better)
Translates to: GTPGWNSGGQLA*LDLLPILFVGG
Trigger: TCCACCAACAAATAAAATCGGAAGTAAATCCAGCAATGCCAGTTGGCCTCCAGAATTCCAACCAGGAGTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000402203.5
ENST00000446273.1
ENST00000454349.7
CDS CAA 72 bp GAGTGGGGTTGTGTCCTATGGGATCTGGGGACCATGTaGATTTGTAATCAGGGAACTTTGCTGAAGTGCTAT +
Preference number: 6 (lower is better)
Translates to: EWGCVLWDLGTM*ICNQGTLLKCY
Trigger: ATAGCACTTCAGCAAAGTTCCCTGATTACAAATCAACATGGTCCCCAGATCCCATAGGACACAACCCCACTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000402203.5
ENST00000446273.1
ENST00000454349.7
CDS CAA 72 bp ATTTCCAGACCCCAAGATTACATTCGTTCCCAGAACTaGCAGACTGGCACTGGCTCCCTTTTCCTTTGTTAC +
Preference number: 6 (lower is better)
Translates to: ISRPQDYIRSQN*QTGTGSLFLCY
Trigger: GTAACAAAGGAAAAGGGAGCCAGTGCCAGTCTGCAAGTTCTGGGAACGAATGTAATCTTGGGGTCTGGAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS TCA 72 bp GCATTTTCCATCTTTGACTGCTGTTCCCTGGATGTCTaGCCTACTGTGCTAACCTGTGCACTGGAATTACTA +
Preference number: 6 (lower is better)
Translates to: AFSIFDCCSLDV*PTVLTCALELL
Trigger: TAGTAATTCCAGTGCACAGGTTAGCACAGTAGGTCAGACATCCAGGGAACAGCAGTCAAAGATGGAAAATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335727.13
ENST00000446273.1
ENST00000454349.7
CDS CCA 72 bp AAATATGGTTTTTCCACATCTTGTTGGAGAGATGAGTaGGGTTGTGTCCTATGGGATCTGGGGACCATGTTG +
Preference number: 6 (lower is better)
Translates to: KYGFSTSCWRDE*GCVLWDLGTML
Trigger: CAACATGGTCCCCAGATCCCATAGGACACAACCCCACTCATCTCTCCAACAAGATGTGGAAAAACCATATTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000402203.5
ENST00000446273.1
ENST00000454349.7
CDS CAA 72 bp CTGGATTTACTTCCGATTTTATTTGTTGGTGGAGATTaGGCAGGTAACCAGCTATCACCAGCAGGACCCGTA +
Preference number: 6 (lower is better)
Translates to: LDLLPILFVGGD*AGNQLSPAGPV
Trigger: TACGGGTCCTGCTGGTGATAGCTGGTTACCTGCCAAATCTCCACCAACAAATAAAATCGGAAGTAAATCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000402203.5
ENST00000446273.1
ENST00000454349.7
CDS CAA 72 bp TTATCGGTGGTGTTTTCGGAAGAAGATTCAGTGTCTTaGCTGGCAATACAAGGCCACTCTTCCATGTCAGAC +
Preference number: 6 (lower is better)
Translates to: LSVVFSEEDSVS*LAIQGHSSMSD
Trigger: GTCTGACATGGAAGAGTGGCCTTGTATTGCCAGCAAAGACACTGAATCTTCTTCCGAAAACACCACCGATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS CAA 90 bp TCCTGTTCCACCTTGGAACTGCTTTCTTCCGATACTTCTCCCTCATaGGTTTGCATGGGAACAGATTTTGTGCAAAACTCTGCAGAAACA +
Preference number: 6 (lower is better)
Translates to: SCSTLELLSSDTSPS*VCMGTDFVQNSAET
Trigger: TGTTTCTGCAGAGTTTTGCACAAAATCTGTTCCCATGCAAACCAATGAGGGAGAAGTATCGGAAGAAAGCAGTTCCAAGGTGGAACAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000402203.5
ENST00000441751.5
CDS TCA 72 bp AGAGACAACAAAATTAACACCCGCATTTTCCATCTTTaGCTGCTGTTCCCTGGATGTCTGACCTACTGTGCT +
Preference number: 6 (lower is better)
Translates to: RDNKINTRIFHL*LLFPGCLTYCA
Trigger: AGCACAGTAGGTCAGACATCCAGGGAACAGCAGTCAAAGATGGAAAATGCGGGTGTTAATTTTGTTGTCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335727.13
ENST00000446273.1
ENST00000454349.7
CDS GCA 72 bp AACCTGTGCACTGGAATTACTATTATCTGTTTCCAATaGCCCTTTCCTAGAAGTTCCTTCTTGGACCAGTGC +
Preference number: 6 (lower is better)
Translates to: NLCTGITIICFQ*PFPRSSFLDQC
Trigger: GCACTGGTCCAAGAAGGAACTTCTAGGAAAGGGGCATTGGAAACAGATAATAGTAATTCCAGTGCACAGGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335727.13
ENST00000446273.1
ENST00000454349.7
CDS CCA 72 bp CCTTGGAACTGCTTTCTTCCGATACTTCTCCCTCATTaGTTTGCATGGGAACAGATTTTGTGCAAAACTCTG +
Preference number: 6 (lower is better)
Translates to: PWNCFLPILLPH*FAWEQILCKTL
Trigger: CAGAGTTTTGCACAAAATCTGTTCCCATGCAAACCAATGAGGGAGAAGTATCGGAAGAAAGCAGTTCCAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000402203.5
ENST00000441751.5
CDS CCA 72 bp TGGATTTACTTCCGATTTTATTTGTTGGTGGAGATTTaGCAGGTAACCAGCTATCACCAGCAGGACCCGTAT +
Preference number: 6 (lower is better)
Translates to: WIYFRFYLLVEI*QVTSYHQQDPY
Trigger: ATACGGGTCCTGCTGGTGATAGCTGGTTACCTGCCAAATCTCCACCAACAAATAAAATCGGAAGTAAATCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000402203.5
ENST00000446273.1
ENST00000454349.7
CDS CCA 72 bp CTCCTGGTTGGAATTCTGGAGGCCAACTGGCATTGCTaGATTTACTTCCGATTTTATTTGTTGGTGGAGATT +
Preference number: 6 (lower is better)
Translates to: LLVGILEANWHC*IYFRFYLLVEI
Trigger: AATCTCCACCAACAAATAAAATCGGAAGTAAATCCAGCAATGCCAGTTGGCCTCCAGAATTCCAACCAGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000402203.5
ENST00000446273.1
ENST00000454349.7
CDS CCA 72 bp GCCCTTTTGATTGTCCCATGCTCCAGTGCTAGAATTTaGTTGGTTTGGACCACTCCATTCTCCAATTTTCAA +
Preference number: 6 (lower is better)
Translates to: ALLIVPCSSARI*LVWTTPFSNFQ
Trigger: TTGAAAATTGGAGAATGGAGTGGTCCAAACCAACCAAATTCTAGCACTGGAGCATGGGACAATCAAAAGGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335727.13
ENST00000446273.1
ENST00000454349.7
CDS CAA 72 bp GGAACTGCTTTCTTCCGATACTTCTCCCTCATTGGTTaGCATGGGAACAGATTTTGTGCAAAACTCTGCAGA +
Preference number: 6 (lower is better)
Translates to: GTAFFRYFSLIG*HGNRFCAKLCR
Trigger: TCTGCAGAGTTTTGCACAAAATCTGTTCCCATGCAAACCAATGAGGGAGAAGTATCGGAAGAAAGCAGTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000402203.5
ENST00000441751.5
CDS GCA 72 bp GAACTGCTTTCTTCCGATACTTCTCCCTCATTGGTTTaGATGGGAACAGATTTTGTGCAAAACTCTGCAGAA +
Preference number: 6 (lower is better)
Translates to: ELLSSDTSPSLV*MGTDFVQNSAE
Trigger: TTCTGCAGAGTTTTGCACAAAATCTGTTCCCATGCAAACCAATGAGGGAGAAGTATCGGAAGAAAGCAGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000402203.5
ENST00000441751.5
CDS CAA 72 bp ACCTTGGAACTGCTTTCTTCCGATACTTCTCCCTCATaGGTTTGCATGGGAACAGATTTTGTGCAAAACTCT +
Preference number: 6 (lower is better)
Translates to: TLELLSSDTSPS*VCMGTDFVQNS
Trigger: AGAGTTTTGCACAAAATCTGTTCCCATGCAAACCAATGAGGGAGAAGTATCGGAAGAAAGCAGTTCCAAGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000402203.5
ENST00000441751.5
CDS CAA 90 bp TTCCACCTTGGAACTGCTTTCTTCCGATACTTCTCCCTCATTGGTTaGCATGGGAACAGATTTTGTGCAAAACTCTGCAGAAACACAAAA +
Preference number: 6 (lower is better)
Translates to: FHLGTAFFRYFSLIG*HGNRFCAKLCRNTK
Trigger: TTTTGTGTTTCTGCAGAGTTTTGCACAAAATCTGTTCCCATGCAAACCAATGAGGGAGAAGTATCGGAAGAAAGCAGTTCCAAGGTGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000402203.5
ENST00000441751.5
CDS TCA 72 bp AGTCCATTGTTGTTCTCTGTAGTAGAGTTGGAAGATTaGACAGATTTAGCCTTAGGGTCAGATTTCCAGACC +
Preference number: 6 (lower is better)
Translates to: SPLLFSVVELED*TDLALGSDFQT
Trigger: GGTCTGGAAATCTGACCCTAAGGCTAAATCTGTTCAATCTTCCAACTCTACTACAGAGAACAACAATGGACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335727.13
ENST00000454349.7
CDS CAA 72 bp CTGAAAGGCTTCCTACAGACAAATCCATTTTGCTGCTaGGATTATCTTCAGTCTGACTCAGCAATCCCATAT +
Preference number: 6 (lower is better)
Translates to: LKGFLQTNPFCC*DYLQSDSAIPY
Trigger: ATATGGGATTGCTGAGTCAGACTGAAGATAATCCAAGCAGCAAAATGGATTTGTCTGTAGGAAGCCTTTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000402203.5
ENST00000446273.1
ENST00000454349.7
ENST00000497559.1
CDS CAA 90 bp TTTCTTCCGATACTTCTCCCTCATTGGTTTGCATGGGAACAGATTTaGTGCAAAACTCTGCAGAAACACAAAAATACTGCCTTTGACAGT +
Preference number: 6 (lower is better)
Translates to: FLPILLPHWFAWEQI*CKTLQKHKNTAFDS
Trigger: ACTGTCAAAGGCAGTATTTTTGTGTTTCTGCAGAGTTTTGCACAAAATCTGTTCCCATGCAAACCAATGAGGGAGAAGTATCGGAAGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301923.13
ENST00000402203.5
ENST00000441751.5
CDS CAA 90 bp CCCATATTTGAAAACTGTTTGGCAAGAGGATTCATCCATGAATCATaGTTTCCTCCTTTGAGTGAGCACTTCATTTGTTTCTTTCCTCCT +
Preference number: 6 (lower is better)
Translates to: PIFENCLARGFIHES*FPPLSEHFICFFPP
Trigger: AGGAGGAAAGAAACAAATGAAGTGCTCACTCAAAGGAGGAAACAATGATTCATGGATGAATCCTCTTGCCAAACAGTTTTCAAATATGGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000402203.5
ENST00000446273.1
ENST00000454349.7
CDS GCA 72 bp TTTTATCTGAAAGGCTTCCTACAGACAAATCCATTTTaGTGCTTGGATTATCTTCAGTCTGACTCAGCAATC +
Preference number: 6 (lower is better)
Translates to: FYLKGFLQTNPF*CLDYLQSDSAI
Trigger: GATTGCTGAGTCAGACTGAAGATAATCCAAGCAGCAAAATGGATTTGTCTGTAGGAAGCCTTTCAGATAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000301923.13
ENST00000335727.13
ENST00000402203.5
ENST00000446273.1
ENST00000454349.7
ENST00000497559.1
CDS CAA 90 bp CCCATATTTGAAAACTGTTTGGCAAGAGGATTCATCCATGAATCATaGTTTCCTCCTTTGAGTGAGCACTTTTTAAGTCCTATTTCTCTT +
Preference number: 6 (lower is better)
Translates to: PIFENCLARGFIHES*FPPLSEHFLSPISL
Trigger: AAGAGAAATAGGACTTAAAAAGTGCTCACTCAAAGGAGGAAACAATGATTCATGGATGAATCCTCTTGCCAAACAGTTTTCAAATATGGG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000497559.1