RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TNPO2 (Homo sapiens)

Ensembl gene IDs: ENSG00000105576

Ensembl transcript IDs: ENST00000356861.9, ENST00000425528.5, ENST00000425528.6, ENST00000450764.6, ENST00000585886.5, ENST00000586775.5, ENST00000587068.1, ENST00000587155.1, ENST00000587654.5, ENST00000588151.5, ENST00000588216.5, ENST00000588484.1, ENST00000588491.1, ENST00000589149.5, ENST00000589337.5, ENST00000589572.5, ENST00000589956.5, ENST00000590781.1, ENST00000592287.5

Found 823 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp AACAGCAATGTCATGATGTTGCTGCGGGCCACCAGCTGCTCCACGTaGCCACCCAGGCCCTCGGCCAGGCCGCTGAGCAGATCCAGTGCT +
Preference number: 1 (lower is better)
Translates to: NSNVMMLLRATSCST*PPRPSARPLSRSSA
Trigger: AGCACTGGATCTGCTCAGCGGCCTGGCCGAGGGCCTGGGTGGTCACGTGGAGCAGCTGGTGGCCCGCAGCAACATCATGACATTGCTGTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588491.1
ENST00000589572.5
3UTR GCA 90 bp TGCAACAAAGCTGGCAGGGAGTGTGTGGAGTGGGTCCCAAGCATGTaGGTGCTGACAGGGCGACTCCCAAGGTCACCATCCTCCTCCCCC +
Preference number: 1 (lower is better)
Translates to: CNKAGRECVEWVPSM*VLTGRLPRSPSSSP
Trigger: GGGGGAGGAGGATGGTGACCTTGGGAGTCGCCCTGTCAGCACGCACATGCTTGGGACCCACTCCACACACTCCCTGCCAGCTTTGTTGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000425528.5
ENST00000450764.6
3UTR GCA 90 bp CACGTGACCACCCAGGCCCTCGGCCAGGCCGCTGAGCAGATCCAGTaGTACGATCATGAAGTCCTTGTCGGGAGCCTCATACTGCTCAGG +
Preference number: 1 (lower is better)
Translates to: HVTTQALGQAAEQIQ*YDHEVLVGSLILLR
Trigger: CCTGAGCAGTATGAGGCTCCCGACAAGGACTTCATGATCGTAGCACTGGATCTGCTCAGCGGCCTGGCCGAGGGCCTGGGTGGTCACGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588491.1
ENST00000589572.5
3UTR CCA 90 bp GGAAAGACACAGGGCTTGGATGGAGGGTCTGGCGCCCAGGAGGGATaGATGGAGCAGGCCCCAGGATGCGAGACTCCAGTCAGACTCCAA +
Preference number: 1 (lower is better)
Translates to: GKTQGLDGGSGAQEG*MEQAPGCETPVRLQ
Trigger: TTGGAGTCTGACTGGAGTCTCGCATCCTGGGGCCTGCTCCATCCATCCCTCCTGGGCGCCAGACCCTCCATCCAAGCCCTGTGTCTTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000425528.5
ENST00000450764.6
3UTR CCA 90 bp TTCGGTCAGCTGTGTAATTCCTCCCTCCCACGTAGCTGGCCCAAGTaGGCTGCCAGAGATGACCCTATTAGAGCCCAGGGGCCCTTGCCC +
Preference number: 1 (lower is better)
Translates to: FGQLCNSSLPRSWPK*AARDDPIRAQGPLP
Trigger: GGGCAAGGGCCCCTGGGCTCTAATAGGGTCATCTCTGGCAGCCCACTTGGGCCAGCTACGTGGGAGGGAGGAATTACACAGCTGACCGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000425528.5
ENST00000450764.6
3UTR CCA 90 bp ACTAATTCTACTGTCTCCATGCAGTCGGGGAAATGGTGGAGCGGCTaGCCCAGCCTCGCCGGTTATGGCACCCGCACATGCGTGTGGCCA +
Preference number: 1 (lower is better)
Translates to: TNSTVSMQSGKWWSG*PSLAGYGTRTCVWP
Trigger: TGGCCACACGCATGTGCGGGTGCCATAACCGGCGAGGCTGGGCCAGCCGCTCCACCATTTCCCCGACTGCATGGAGACAGTAGAATTAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000425528.5
ENST00000450764.6
3UTR TCA 90 bp CCAGTGTCTTCAAAAGCCACTGGAGCACACAGGAAGGAGAAACGGTaGCCTCTGGCCAGCCCCAGCCACTCCAGTGGTTCTCACCCTGCG +
Preference number: 1 (lower is better)
Translates to: PVSSKATGAHRKEKR*PLASPSHSSGSHPA
Trigger: CGCAGGGTGAGAACCACTGGAGTGGCTGGGGCTGGCCAGAGGTCACCGTTTCTCCTTCCTGTGTGCTCCAGTGGCTTTTGAAGACACTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000425528.5
ENST00000450764.6
3UTR TCA 90 bp GCTGGGTGTACATCATGGCCTGAGCCAGTGTCTTCTGCACCAGGGTaGCACAGCGCTGGTAGACGGGCTCACAGTAAGGCAGGAAGCCAC +
Preference number: 1 (lower is better)
Translates to: AGCTSWPEPVSSAPG*HSAGRRAHSKAGSH
Trigger: GTGGCTTCCTGCCTTACTGTGAGCCCGTCTACCAGCGCTGTGTCACCCTGGTGCAGAAGACACTGGCTCAGGCCATGATGTACACCCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588491.1
ENST00000589572.5
3UTR CCA 90 bp GAAGCCGGATTCGGTCAGCTGTGTAATTCCTCCCTCCCACGTAGCTaGCCCAAGTGGGCTGCCAGAGATGACCCTATTAGAGCCCAGGGG +
Preference number: 1 (lower is better)
Translates to: EAGFGQLCNSSLPRS*PKWAARDDPIRAQG
Trigger: CCCCTGGGCTCTAATAGGGTCATCTCTGGCAGCCCACTTGGGCCAGCTACGTGGGAGGGAGGAATTACACAGCTGACCGAATCCGGCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000425528.5
ENST00000450764.6
3UTR CCA 90 bp ACTCAGGGGTTCACTAATTCTACTGTCTCCATGCAGTCGGGGAAATaGTGGAGCGGCTGGCCCAGCCTCGCCGGTTATGGCACCCGCACA +
Preference number: 1 (lower is better)
Translates to: TQGFTNSTVSMQSGK*WSGWPSLAGYGTRT
Trigger: TGTGCGGGTGCCATAACCGGCGAGGCTGGGCCAGCCGCTCCACCATTTCCCCGACTGCATGGAGACAGTAGAATTAGTGAACCCCTGAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000425528.5
ENST00000450764.6
3UTR CCA 90 bp CTTCAAAAGCCACTGGAGCACACAGGAAGGAGAAACGGTGACCTCTaGCCAGCCCCAGCCACTCCAGTGGTTCTCACCCTGCGAGCTAGG +
Preference number: 1 (lower is better)
Translates to: LQKPLEHTGRRNGDL*PAPATPVVLTLRAR
Trigger: CCTAGCTCGCAGGGTGAGAACCACTGGAGTGGCTGGGGCTGGCCAGAGGTCACCGTTTCTCCTTCCTGTGTGCTCCAGTGGCTTTTGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000425528.5
ENST00000450764.6
3UTR CCA 90 bp GTGTCAATATTGTCCATCAGCGCCTGGGCCCGGTCCATGATGAACTaGTTCACGCAGGCGATGGCGTGGGACCGGATCTTGGGACTGCAG +
Preference number: 1 (lower is better)
Translates to: VSILSISAWARSMMN*FTQAMAWDRILGLQ
Trigger: CTGCAGTCCCAAGATCCGGTCCCACGCCATCGCCTGCGTGAACCAGTTCATCATGGACCGGGCCCAGGCGCTGATGGACAATATTGACAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586775.5
3UTR CCA 90 bp GCAAATAGGTGCTCGATGAAGGTGTCAATATTGTCCATCAGCGCCTaGGCCCGGTCCATGATGAACTGGTTCACGCAGGCGATGGCGTGG +
Preference number: 1 (lower is better)
Translates to: ANRCSMKVSILSISA*ARSMMNWFTQAMAW
Trigger: CCACGCCATCGCCTGCGTGAACCAGTTCATCATGGACCGGGCCCAGGCGCTGATGGACAATATTGACACCTTCATCGAGCACCTATTTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586775.5
3UTR TCA 90 bp GGGGTGGGCGTGCAGGGACACCCAGCTAATTTATGGAATGTGTACTaGGTGCCCCTTGGAATAGATGCAGGGCCTGACCCTGACTATGGA +
Preference number: 1 (lower is better)
Translates to: GVGVQGHPANLWNVY*VPLGIDAGPDPDYG
Trigger: TCCATAGTCAGGGTCAGGCCCTGCATCTATTCCAAGGGGCACTCAGTACACATTCCATAAATTAGCTGGGTGTCCCTGCACGCCCACCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000425528.5
ENST00000450764.6
3UTR CCA 90 bp TCTGGGCTCACTGGGTACTATGATGAGCAGGAAGTCCCAGGGAGATaGAATAGGGAACAGGGGACACACCACCTTTCCCTTCCACCAAGC +
Preference number: 1 (lower is better)
Translates to: SGLTGYYDEQEVPGR*NREQGTHHLSLPPS
Trigger: GCTTGGTGGAAGGGAAAGGTGGTGTGTCCCCTGTTCCCTATTCCATCTCCCTGGGACTTCCTGCTCATCATAGTACCCAGTGAGCCCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000425528.5
ENST00000450764.6
3UTR GCA 90 bp AACAAATGGCTTCCAGAGACCTGCTCGAGTTTCATGGGGTGGGCGTaGAGGGACACCCAGCTAATTTATGGAATGTGTACTGAGTGCCCC +
Preference number: 1 (lower is better)
Translates to: NKWLPETCSSFMGWA*RDTQLIYGMCTECP
Trigger: GGGGCACTCAGTACACATTCCATAAATTAGCTGGGTGTCCCTGCACGCCCACCCCATGAAACTCGAGCAGGTCTCTGGAAGCCATTTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000425528.5
ENST00000450764.6
3UTR CCA 90 bp AGGGGGAAGAGGTCCTTGTCTTCGTCCTTGAGCTCATTCCACTTCTaGATCAGTGGGGGCATCAGCTTCTGGATGTATTCCACGCTGTCT +
Preference number: 1 (lower is better)
Translates to: RGKRSLSSSLSSFHF*ISGGISFWMYSTLS
Trigger: AGACAGCGTGGAATACATCCAGAAGCTGATGCCCCCACTGATCCAGAAGTGGAATGAGCTCAAGGACGAAGACAAGGACCTCTTCCCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000589572.5
3UTR GCA 90 bp CACCGCCAATTCCGGCAAAACAGCAGAAGCTTCTTAAACTCTAGATaGAGGTTACACGGAAGGCCTTACGGGTTAACTCAGGGGTTCACT +
Preference number: 1 (lower is better)
Translates to: HRQFRQNSRSFLNSR*RLHGRPYGLTQGFT
Trigger: AGTGAACCCCTGAGTTAACCCGTAAGGCCTTCCGTGTAACCTGCATCTAGAGTTTAAGAAGCTTCTGCTGTTTTGCCGGAATTGGCGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000425528.5
ENST00000450764.6
3UTR-3UTR CCA 90 bp GGTGACCTCTGGCCAGCCCCAGCCACTCCAGTGGTTCTCACCCTGCGAGCTAGGCAGTCGGGGAAATGGTaGAGCGGCTGGCCCAGCCTC +
Preference number: 2 (lower is better)
Translates to: GDLWPAPATPVVLTLRARQSGKW*SGWPSL
Trigger: GAGGCTGGGCCAGCCGCTCCACCATTTCCCCGACTG...CCTAGCTCGCAGGGTGAGAACCACTGGAGTGGCTGGGGCTGGCCAGAGGTCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000425528.5
ENST00000450764.6
3UTR-3UTR TCA 90 bp CCCAGGCCCTCGGCCAGGCCGCTGAGCAGATCCAGTGCTACGATCATGAAGTCCTCTTCTGCACCAGGGTaGCACAGCGCTGGTAGACGG +
Preference number: 2 (lower is better)
Translates to: PRPSARPLSRSSATIMKSSSAPG*HSAGRR
Trigger: CCGTCTACCAGCGCTGTGTCACCCTGGTGCAGAAGA...GGACTTCATGATCGTAGCACTGGATCTGCTCAGCGGCCTGGCCGAGGGCCTGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588491.1
ENST00000589572.5
3UTR-3UTR TCA 90 bp CATGCACTGGAACAGCAATGTCATGATGTTGCTGCGGGCCACCAGCTGCTCCACGGCGGTGGCCACCGATaGCAGACACTCCAGCAGGGG +
Preference number: 2 (lower is better)
Translates to: HALEQQCHDVAAGHQLLHGGGHR*QTLQQG
Trigger: CCCCTGCTGGAGTGTCTGTCATCGGTGGCCACCGCC...GTGGAGCAGCTGGTGGCCCGCAGCAACATCATGACATTGCTGTTCCAGTGCATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588491.1
ENST00000589572.5
3UTR-3UTR TCA 90 bp CAGTGCTACGATCATGAAGTCCTTGTCGGGAGCCTCATACTGCTCAGGGTGCTGGGCGGTGGCCACCGATaGCAGACACTCCAGCAGGGG +
Preference number: 2 (lower is better)
Translates to: QCYDHEVLVGSLILLRVLGGGHR*QTLQQG
Trigger: CCCCTGCTGGAGTGTCTGTCATCGGTGGCCACCGCC...CAGCACCCTGAGCAGTATGAGGCTCCCGACAAGGACTTCATGATCGTAGCACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588491.1
ENST00000589572.5
3UTR-3UTR TCA 90 bp CCACCCAGGCCCTCGGCCAGGCCGCTGAGCAGATCCAGTGCTACGATCATGAAGGTGTACATCATGGCCTaGGCCAGTGTCTTCTGCACC +
Preference number: 2 (lower is better)
Translates to: PPRPSARPLSRSSATIMKVYIMA*ASVFCT
Trigger: GGTGCAGAAGACACTGGCTCAGGCCATGATGTACAC...CTTCATGATCGTAGCACTGGATCTGCTCAGCGGCCTGGCCGAGGGCCTGGGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588491.1
ENST00000589572.5
3UTR-3UTR TCA 90 bp AAGGAGCTCTGCCGGACCTCAGGCATCGAGTCCTGCATGCACTGGAACAGCAATCCTCGGCCAGGCCGCTaGGCAGATCCAGTGCTACGA +
Preference number: 2 (lower is better)
Translates to: KELCRTSGIESCMHWNSNPRPGR*ADPVLR
Trigger: TCGTAGCACTGGATCTGCTCAGCGGCCTGGCCGAGG...ATTGCTGTTCCAGTGCATGCAGGACTCGATGCCTGAGGTCCGGCAGAGCTCCTT
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588491.1
ENST00000589572.5
3UTR-3UTR CCA 90 bp GGATGGAGCAGGCCCCAGGATGCGAGACTCCAGTCAGACTCCAAAACACAAGGGTCCCTCCCACGTAGCTaGCCCAAGTGGGCTGCCAGA +
Preference number: 2 (lower is better)
Translates to: GWSRPQDARLQSDSKTQGSLPRS*PKWAAR
Trigger: TCTGGCAGCCCACTTGGGCCAGCTACGTGGGAGGGA...CCCTTGTGTTTTGGAGTCTGACTGGAGTCTCGCATCCTGGGGCCTGCTCCATCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000425528.5
ENST00000450764.6
3UTR-3UTR CCA 90 bp CAGGAACTTGGGGATCATGATGTTGAGGGGCCTGTTGAGGGCGTCACTGTCCAGAGCAGGTTGCAGAGCTaGGGCAGCAGCTCGGGCCAC +
Preference number: 2 (lower is better)
Translates to: QELGDHDVEGPVEGVTVQSRLQS*GSSSGH
Trigger: GTGGCCCGAGCTGCTGCCCCAGCTCTGCAACCTGCT...CTGGACAGTGACGCCCTCAACAGGCCCCTCAACATCATGATCCCCAAGTTCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586775.5
3UTR-3UTR TCA 90 bp CCACGTAGCTGGCCCAAGTGGGCTGCCAGAGATGACCCTATTAGAGCCCAGGGGGAAGGCATCTGGATTTaGGTCCCACTCACTCCTCCC +
Preference number: 2 (lower is better)
Translates to: PRSWPKWAARDDPIRAQGEGIWI*VPLTPP
Trigger: GGGAGGAGTGAGTGGGACTCAAATCCAGATGCCTTC...CCCCTGGGCTCTAATAGGGTCATCTCTGGCAGCCCACTTGGGCCAGCTACGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000425528.5
ENST00000450764.6
3UTR-3UTR CCA 90 bp GGATGGAGCAGGCCCCAGGATGCGAGACTCCAGTCAGACTCCAAAACACAAGGGCGTAGCTGGCCCAAGTaGGCTGCCAGAGATGACCCT +
Preference number: 2 (lower is better)
Translates to: GWSRPQDARLQSDSKTQGRSWPK*AARDDP
Trigger: AGGGTCATCTCTGGCAGCCCACTTGGGCCAGCTACG...CCCTTGTGTTTTGGAGTCTGACTGGAGTCTCGCATCCTGGGGCCTGCTCCATCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000425528.5
ENST00000450764.6
3UTR-3UTR CCA 90 bp GAACAGCAATGTCATGATGTTGCTGCGGGCCACCAGCTGCTCCACGTGACCACCCACTCTGCAGGGCGGTaGCCACCGATGACAGACACT +
Preference number: 2 (lower is better)
Translates to: EQQCHDVAAGHQLLHVTTHSAGR*PPMTDT
Trigger: AGTGTCTGTCATCGGTGGCCACCGCCCTGCAGAGTG...GGTGGTCACGTGGAGCAGCTGGTGGCCCGCAGCAACATCATGACATTGCTGTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588491.1
ENST00000589572.5
3UTR-3UTR CCA 90 bp AGGATCTCTGGGCTCACTGGGTACTATGATGAGCAGGAAGTCCCAGGGAGATGGTCCCTCCCACGTAGCTaGCCCAAGTGGGCTGCCAGA +
Preference number: 2 (lower is better)
Translates to: RISGLTGYYDEQEVPGRWSLPRS*PKWAAR
Trigger: TCTGGCAGCCCACTTGGGCCAGCTACGTGGGAGGGA...CCATCTCCCTGGGACTTCCTGCTCATCATAGTACCCAGTGAGCCCAGAGATCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000425528.5
ENST00000450764.6
3UTR-3UTR CCA 90 bp TCCAGAAGCTCTGATGAGTCTTCACAGATCTTCTGCAGGGCTCCAAAGGCTCCCAGCAGGTTGCAGAGCTaGGGCAGCAGCTCGGGCCAC +
Preference number: 2 (lower is better)
Translates to: SRSSDESSQIFCRAPKAPSRLQS*GSSSGH
Trigger: GTGGCCCGAGCTGCTGCCCCAGCTCTGCAACCTGCT...GGGAGCCTTTGGAGCCCTGCAGAAGATCTGTGAAGACTCATCAGAGCTTCTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586775.5
ENST00000587654.5
3UTR CAA 90 bp TCGGCCAGGCCGCTGAGCAGATCCAGTGCTACGATCATGAAGTCCTaGTCGGGAGCCTCATACTGCTCAGGGTGCTGGGTGTACATCATG +
Preference number: 2 (lower is better)
Translates to: SARPLSRSSATIMKS*SGASYCSGCWVYIM
Trigger: CATGATGTACACCCAGCACCCTGAGCAGTATGAGGCTCCCGACAAGGACTTCATGATCGTAGCACTGGATCTGCTCAGCGGCCTGGCCGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588491.1
ENST00000589572.5
3UTR-3UTR TCA 90 bp CTAAGGGGGTCTGCAAGGCCCAGTTTTCTGGCCAACTGGGAAGTAACTACACCCGGAGACACCACCAGCTaGGGCTGCAACAAAGCTGGC +
Preference number: 2 (lower is better)
Translates to: LRGSARPSFLANWEVTTPGDTTS*GCNKAG
Trigger: GCCAGCTTTGTTGCAGCCTCAGCTGGTGGTGTCTCC...GGGTGTAGTTACTTCCCAGTTGGCCAGAAAACTGGGCCTTGCAGACCCCCTTAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000425528.5
ENST00000450764.6
3UTR-3UTR TCA 90 bp AAGTTCTACACAAGTGGAATCTCACGCCACCTCGGCGCCAATCCCCAGCACAGCCTGGGGCCTGAAACGTaGGAAGGGGGTTTCAGAAGC +
Preference number: 2 (lower is better)
Translates to: KFYTSGISRHLGANPQHSLGPET*EGGFRS
Trigger: GCTTCTGAAACCCCCTTCTCACGTTTCAGGCCCCAG...GCTGTGCTGGGGATTGGCGCCGAGGTGGCGTGAGATTCCACTTGTGTAGAACTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000425528.5
3UTR-3UTR GCA 90 bp ACCTCAGGCATCGAGTCCTGCATGCACTGGAACAGCAATGTCATGATGTTGCTGGGCAGGAAGCCACTCTaGAGGGCGGTGGCCACCGAT +
Preference number: 2 (lower is better)
Translates to: TSGIESCMHWNSNVMMLLGRKPL*RAVATD
Trigger: ATCGGTGGCCACCGCCCTGCAGAGTGGCTTCCTGCC...CAGCAACATCATGACATTGCTGTTCCAGTGCATGCAGGACTCGATGCCTGAGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588491.1
ENST00000589572.5
3UTR-3UTR CCA 90 bp CTAAGGGGGTCTGCAAGGCCCAGTTTTCTGGCCAACTGGGAAGTAACTACACCCAAATGGTGGAGCGGCTaGCCCAGCCTCGCCGGTTAT +
Preference number: 2 (lower is better)
Translates to: LRGSARPSFLANWEVTTPKWWSG*PSLAGY
Trigger: ATAACCGGCGAGGCTGGGCCAGCCGCTCCACCATTT...GGGTGTAGTTACTTCCCAGTTGGCCAGAAAACTGGGCCTTGCAGACCCCCTTAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000425528.5
ENST00000450764.6
3UTR-3UTR CCA 90 bp CCGGAAGGTTCTCTAGAATTGCTGACCCAGTCTAGTAGGATCTCTGGGCTCACTCAGTCGGGGAAATGGTaGAGCGGCTGGCCCAGCCTC +
Preference number: 2 (lower is better)
Translates to: PEGSLELLTQSSRISGLTQSGKW*SGWPSL
Trigger: GAGGCTGGGCCAGCCGCTCCACCATTTCCCCGACTG...AGTGAGCCCAGAGATCCTACTAGACTGGGTCAGCAATTCTAGAGAACCTTCCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000425528.5
ENST00000450764.6
3UTR-3UTR TCA 90 bp ACTATGATGAGCAGGAAGTCCCAGGGAGATGGAATAGGGAACAGGGGACACACCTCCCCGTTTGTAGGATaGGCATGGTGGCCCCACCCA +
Preference number: 2 (lower is better)
Translates to: TMMSRKSQGDGIGNRGHTSPFVG*AWWPHP
Trigger: TGGGTGGGGCCACCATGCTCATCCTACAAACGGGGA...GGTGTGTCCCCTGTTCCCTATTCCATCTCCCTGGGACTTCCTGCTCATCATAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000425528.5
ENST00000450764.6
3UTR-3UTR TCA 90 bp GGGTTCACTAATTCTACTGTCTCCATGCAGTCGGGGAAATGGTGGAGCGGCTGGCCATGTGTGTCCGTGTaGGTGTACGCGTCCCTACGA +
Preference number: 2 (lower is better)
Translates to: GFTNSTVSMQSGKWWSGWPCVSV*VYASLR
Trigger: TCGTAGGGACGCGTACACTCACACGGACACACATGG...CCAGCCGCTCCACCATTTCCCCGACTGCATGGAGACAGTAGAATTAGTGAACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000425528.5
ENST00000450764.6
3UTR-3UTR GCA 90 bp AAGTTCTACACAAGTGGAATCTCACGCCACCTCGGCGCCAATCCCCAGCACAGCTTCATGGGGTGGGCGTaGAGGGACACCCAGCTAATT +
Preference number: 2 (lower is better)
Translates to: KFYTSGISRHLGANPQHSFMGWA*RDTQLI
Trigger: AATTAGCTGGGTGTCCCTGCACGCCCACCCCATGAA...GCTGTGCTGGGGATTGGCGCCGAGGTGGCGTGAGATTCCACTTGTGTAGAACTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000425528.5
3UTR-3UTR TCA 90 bp CTAAGGGGGTCTGCAAGGCCCAGTTTTCTGGCCAACTGGGAAGTAACTACACCCGAAGGCATCTGGATTTaGGTCCCACTCACTCCTCCC +
Preference number: 2 (lower is better)
Translates to: LRGSARPSFLANWEVTTPEGIWI*VPLTPP
Trigger: GGGAGGAGTGAGTGGGACTCAAATCCAGATGCCTTC...GGGTGTAGTTACTTCCCAGTTGGCCAGAAAACTGGGCCTTGCAGACCCCCTTAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000425528.5
ENST00000450764.6
3UTR-3UTR TCA 90 bp AAGTTCTACACAAGTGGAATCTCACGCCACCTCGGCGCCAATCCCCAGCACAGCGAGCCCCTTCCACCTTaGCCATGTTCCCAGACTATT +
Preference number: 2 (lower is better)
Translates to: KFYTSGISRHLGANPQHSEPLPP*PCSQTI
Trigger: AATAGTCTGGGAACATGGTCAAGGTGGAAGGGGCTC...GCTGTGCTGGGGATTGGCGCCGAGGTGGCGTGAGATTCCACTTGTGTAGAACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000425528.5
3UTR-3UTR CCA 90 bp GCGTGCAGGGACACCCAGCTAATTTATGGAATGTGTACTGAGTGCCCCTTGGAACGTAGCTGGCCCAAGTaGGCTGCCAGAGATGACCCT +
Preference number: 2 (lower is better)
Translates to: ACRDTQLIYGMCTECPLERSWPK*AARDDP
Trigger: AGGGTCATCTCTGGCAGCCCACTTGGGCCAGCTACG...TTCCAAGGGGCACTCAGTACACATTCCATAAATTAGCTGGGTGTCCCTGCACGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000425528.5
ENST00000450764.6
3UTR-3UTR CCA 90 bp CTCTCTTCAGGAAAAAGGTCCCAACCCAGTGTCTTCAAAAGCCACTGGAGCACACAGCCTCGCCGGTTATaGCACCCGCACATGCGTGTG +
Preference number: 2 (lower is better)
Translates to: LSSGKRSQPSVFKSHWSTQPRRL*HPHMRV
Trigger: CACACGCATGTGCGGGTGCCATAACCGGCGAGGCTG...TGTGCTCCAGTGGCTTTTGAAGACACTGGGTTGGGACCTTTTTCCTGAAGAGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000425528.5
ENST00000450764.6
3UTR-3UTR CCA 90 bp TTGACCATGTTCCCAGACTATTCCGGAAGGTTCTCTAGAATTGCTGACCCAGTCCAGTCGGGGAAATGGTaGAGCGGCTGGCCCAGCCTC +
Preference number: 2 (lower is better)
Translates to: LTMFPDYSGRFSRIADPVQSGKW*SGWPSL
Trigger: GAGGCTGGGCCAGCCGCTCCACCATTTCCCCGACTG...GACTGGGTCAGCAATTCTAGAGAACCTTCCGGAATAGTCTGGGAACATGGTCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000425528.5
ENST00000450764.6
3UTR-3UTR CCA 90 bp TACACCCAGCTCTCTTCAGGAAAAAGGTCCCAACCCAGTGTCTTCAAAAGCCACATGCAGTCGGGGAAATaGTGGAGCGGCTGGCCCAGC +
Preference number: 2 (lower is better)
Translates to: YTQLSSGKRSQPSVFKSHMQSGK*WSGWPS
Trigger: GCTGGGCCAGCCGCTCCACCATTTCCCCGACTGCAT...GTGGCTTTTGAAGACACTGGGTTGGGACCTTTTTCCTGAAGAGAGCTGGGTGTA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000425528.5
ENST00000450764.6
3UTR-3UTR CCA 90 bp AAGGAGCTCTGCCGGACCTCAGGCATCGAGTCCTGCATGCACTGGAACAGCAATGGGGGCATCAGCTTCTaGATGTATTCCACGCTGTCT +
Preference number: 2 (lower is better)
Translates to: KELCRTSGIESCMHWNSNGGISF*MYSTLS
Trigger: AGACAGCGTGGAATACATCCAGAAGCTGATGCCCCC...ATTGCTGTTCCAGTGCATGCAGGACTCGATGCCTGAGGTCCGGCAGAGCTCCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000589572.5
3UTR-3UTR TCA 90 bp ACTATGATGAGCAGGAAGTCCCAGGGAGATGGAATAGGGAACAGGGGACACACCGAAACGGACTGCCCCTaGAGCTGCTTACAGAGAGAG +
Preference number: 2 (lower is better)
Translates to: TMMSRKSQGDGIGNRGHTETDCP*SCLQRE
Trigger: CTCTCTCTGTAAGCAGCTTCAGGGGCAGTCCGTTTC...GGTGTGTCCCCTGTTCCCTATTCCATCTCCCTGGGACTTCCTGCTCATCATAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000425528.5
ENST00000450764.6
3UTR-3UTR TCA 90 bp AGATCCAGTGCTACGATCATGAAGTCCTTGTCGGGAGCCTCATACTGCTCAGGGGTGTACATCATGGCCTaGGCCAGTGTCTTCTGCACC +
Preference number: 2 (lower is better)
Translates to: RSSATIMKSLSGASYCSGVYIMA*ASVFCT
Trigger: GGTGCAGAAGACACTGGCTCAGGCCATGATGTACAC...CCCTGAGCAGTATGAGGCTCCCGACAAGGACTTCATGATCGTAGCACTGGATCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000588491.1
ENST00000589572.5
3UTR-3UTR GCA 90 bp ACTATGATGAGCAGGAAGTCCCAGGGAGATGGAATAGGGAACAGGGGACACACCACAGCGACTTCCGGATaGAGCGCACTCCCCAGTAAT +
Preference number: 2 (lower is better)
Translates to: TMMSRKSQGDGIGNRGHTTATSG*SALPSN
Trigger: ATTACTGGGGAGTGCGCTGCATCCGGAAGTCGCTGT...GGTGTGTCCCCTGTTCCCTATTCCATCTCCCTGGGACTTCCTGCTCATCATAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000425528.5
ENST00000450764.6
3UTR-3UTR CCA 90 bp CTCTCTTCAGGAAAAAGGTCCCAACCCAGTGTCTTCAAAAGCCACTGGAGCACACCCCAGCCACTCCAGTaGTTCTCACCCTGCGAGCTA +
Preference number: 2 (lower is better)
Translates to: LSSGKRSQPSVFKSHWSTPQPLQ*FSPCEL
Trigger: TAGCTCGCAGGGTGAGAACCACTGGAGTGGCTGGGG...TGTGCTCCAGTGGCTTTTGAAGACACTGGGTTGGGACCTTTTTCCTGAAGAGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000425528.5
ENST00000450764.6
3UTR-3UTR CCA 90 bp TCCAGTGCTACGATCATGAAGTCCTTGTCGGGAGCCTCATACTGCTCAGGGTGCAGCTCATTCCACTTCTaGATCAGTGGGGGCATCAGC +
Preference number: 2 (lower is better)
Translates to: SSATIMKSLSGASYCSGCSSFHF*ISGGIS
Trigger: GCTGATGCCCCCACTGATCCAGAAGTGGAATGAGCT...GCACCCTGAGCAGTATGAGGCTCCCGACAAGGACTTCATGATCGTAGCACTGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000589572.5
3UTR-3UTR TCA 90 bp ACCTCAGGCATCGAGTCCTGCATGCACTGGAACAGCAATGTCATGATGTTGCTGGGAACAGCAATGTCATaGTGTTGCTGCGGGCCACCA +
Preference number: 2 (lower is better)
Translates to: TSGIESCMHWNSNVMMLLGTAMS*CCCGPP
Trigger: TGGTGGCCCGCAGCAACATCATGACATTGCTGTTCC...CAGCAACATCATGACATTGCTGTTCCAGTGCATGCAGGACTCGATGCCTGAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588491.1
ENST00000589572.5
3UTR-3UTR CCA 90 bp AGATCCAGTGCTACGATCATGAAGTCCTTGTCGGGAGCCTCATACTGCTCAGGGGCTGGGTGTACATCATaGCCTGAGCCAGTGTCTTCT +
Preference number: 2 (lower is better)
Translates to: RSSATIMKSLSGASYCSGAGCTS*PEPVSS
Trigger: AGAAGACACTGGCTCAGGCCATGATGTACACCCAGC...CCCTGAGCAGTATGAGGCTCCCGACAAGGACTTCATGATCGTAGCACTGGATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000588491.1
ENST00000589572.5
3UTR-3UTR GCA 90 bp AGGATCTCTGGGCTCACTGGGTACTATGATGAGCAGGAAGTCCCAGGGAGATGGTTCTTAAACTCTAGATaGAGGTTACACGGAAGGCCT +
Preference number: 2 (lower is better)
Translates to: RISGLTGYYDEQEVPGRWFLNSR*RLHGRP
Trigger: AGGCCTTCCGTGTAACCTGCATCTAGAGTTTAAGAA...CCATCTCCCTGGGACTTCCTGCTCATCATAGTACCCAGTGAGCCCAGAGATCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000425528.5
ENST00000450764.6
3UTR-3UTR GCA 90 bp TTGACCATGTTCCCAGACTATTCCGGAAGGTTCTCTAGAATTGCTGACCCAGTCTTCTTAAACTCTAGATaGAGGTTACACGGAAGGCCT +
Preference number: 2 (lower is better)
Translates to: LTMFPDYSGRFSRIADPVFLNSR*RLHGRP
Trigger: AGGCCTTCCGTGTAACCTGCATCTAGAGTTTAAGAA...GACTGGGTCAGCAATTCTAGAGAACCTTCCGGAATAGTCTGGGAACATGGTCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000425528.5
ENST00000450764.6
3UTR GCA 72 bp CCCGTTTGTAGGATGAGCATGGTGGCCCCACCCACCTaGCAGGAGGGCAAGTGGACGGATGGACGGACGGAC +
Preference number: 3 (lower is better)
Translates to: PVCRMSMVAPPT*QEGKWTDGRTD
Trigger: GTCCGTCCGTCCATCCGTCCACTTGCCCTCCTGGCAGGTGGGTGGGGCCACCATGCTCATCCTACAAACGGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000425528.5
ENST00000450764.6
3UTR CCA 72 bp ACTGTCTCCATGCAGTCGGGGAAATGGTGGAGCGGCTaGCCCAGCCTCGCCGGTTATGGCACCCGCACATGC +
Preference number: 3 (lower is better)
Translates to: TVSMQSGKWWSG*PSLAGYGTRTC
Trigger: GCATGTGCGGGTGCCATAACCGGCGAGGCTGGGCCAGCCGCTCCACCATTTCCCCGACTGCATGGAGACAGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000425528.5
ENST00000450764.6
3UTR TCA 72 bp GGGAGTGTGTGGAGTGGGTCCCAAGCATGTGCGTGCTaGCAGGGCGACTCCCAAGGTCACCATCCTCCTCCC +
Preference number: 3 (lower is better)
Translates to: GSVWSGSQACAC*QGDSQGHHPPP
Trigger: GGGAGGAGGATGGTGACCTTGGGAGTCGCCCTGTCAGCACGCACATGCTTGGGACCCACTCCACACACTCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000425528.5
ENST00000450764.6
3UTR CCA 72 bp CCACTGGAGCACACAGGAAGGAGAAACGGTGACCTCTaGCCAGCCCCAGCCACTCCAGTGGTTCTCACCCTG +
Preference number: 3 (lower is better)
Translates to: PLEHTGRRNGDL*PAPATPVVLTL
Trigger: CAGGGTGAGAACCACTGGAGTGGCTGGGGCTGGCCAGAGGTCACCGTTTCTCCTTCCTGTGTGCTCCAGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000425528.5
ENST00000450764.6
3UTR CCA 72 bp TTGTCCATCAGCGCCTGGGCCCGGTCCATGATGAACTaGTTCACGCAGGCGATGGCGTGGGACCGGATCTTG +
Preference number: 3 (lower is better)
Translates to: LSISAWARSMMN*FTQAMAWDRIL
Trigger: CAAGATCCGGTCCCACGCCATCGCCTGCGTGAACCAGTTCATCATGGACCGGGCCCAGGCGCTGATGGACAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586775.5
3UTR GCA 72 bp ACCCAGGCCCTCGGCCAGGCCGCTGAGCAGATCCAGTaGTACGATCATGAAGTCCTTGTCGGGAGCCTCATA +
Preference number: 3 (lower is better)
Translates to: TQALGQAAEQIQ*YDHEVLVGSLI
Trigger: TATGAGGCTCCCGACAAGGACTTCATGATCGTAGCACTGGATCTGCTCAGCGGCCTGGCCGAGGGCCTGGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588491.1
ENST00000589572.5
3UTR-3UTR CAA 90 bp CCACTCTGCAGGGCGGTGGCCACCGATGACAGACACTCCAGCAGGGGGAAGAGGTCCTTGTCTTCGTCCTaGAGCTCATTCCACTTCTGG +
Preference number: 3 (lower is better)
Translates to: PLCRAVATDDRHSSRGKRSLSSS*SSFHFW
Trigger: CCAGAAGTGGAATGAGCTCAAGGACGAAGACAAGGA...CCTCTTCCCCCTGCTGGAGTGTCTGTCATCGGTGGCCACCGCCCTGCAGAGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000588491.1
ENST00000589572.5
3UTR CCA 72 bp CTGTGTAATTCCTCCCTCCCACGTAGCTGGCCCAAGTaGGCTGCCAGAGATGACCCTATTAGAGCCCAGGGG +
Preference number: 3 (lower is better)
Translates to: LCNSSLPRSWPK*AARDDPIRAQG
Trigger: CCCCTGGGCTCTAATAGGGTCATCTCTGGCAGCCCACTTGGGCCAGCTACGTGGGAGGGAGGAATTACACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000425528.5
ENST00000450764.6
3UTR CCA 72 bp TTCACTAATTCTACTGTCTCCATGCAGTCGGGGAAATaGTGGAGCGGCTGGCCCAGCCTCGCCGGTTATGGC +
Preference number: 3 (lower is better)
Translates to: FTNSTVSMQSGK*WSGWPSLAGYG
Trigger: GCCATAACCGGCGAGGCTGGGCCAGCCGCTCCACCATTTCCCCGACTGCATGGAGACAGTAGAATTAGTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000425528.5
ENST00000450764.6
3UTR-3UTR CAA 90 bp ACCTCGGGGTCATCATCCACAGCCAGGGCAAATAGGTGCTCGATGAAGGTGTCAATGTTGAGGGGCCTGTaGAGGGCGTCACTGTCCAGA +
Preference number: 3 (lower is better)
Translates to: TSGSSSTARANRCSMKVSMLRGL*RASLSR
Trigger: TCTGGACAGTGACGCCCTCAACAGGCCCCTCAACAT...TGACACCTTCATCGAGCACCTATTTGCCCTGGCTGTGGATGATGACCCCGAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586775.5
3UTR CCA 72 bp GGACTGTGGCTCAAGGCCAGTCTGGGTCCACAGCCCTaGGTAGGGGAGAAGGTTGAGAAGCTGAAACTTCAT +
Preference number: 3 (lower is better)
Translates to: GLWLKASLGPQP*VGEKVEKLKLH
Trigger: ATGAAGTTTCAGCTTCTCAACCTTCTCCCCTACCCAGGGCTGTGGACCCAGACTGGCCTTGAGCCACAGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000425528.5
3UTR CCA 72 bp TTCGGTCAGCTGTGTAATTCCTCCCTCCCACGTAGCTaGCCCAAGTGGGCTGCCAGAGATGACCCTATTAGA +
Preference number: 3 (lower is better)
Translates to: FGQLCNSSLPRS*PKWAARDDPIR
Trigger: TCTAATAGGGTCATCTCTGGCAGCCCACTTGGGCCAGCTACGTGGGAGGGAGGAATTACACAGCTGACCGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000425528.5
ENST00000450764.6
3UTR GCA 72 bp CTTCCAGAGACCTGCTCGAGTTTCATGGGGTGGGCGTaGAGGGACACCCAGCTAATTTATGGAATGTGTACT +
Preference number: 3 (lower is better)
Translates to: LPETCSSFMGWA*RDTQLIYGMCT
Trigger: AGTACACATTCCATAAATTAGCTGGGTGTCCCTGCACGCCCACCCCATGAAACTCGAGCAGGTCTCTGGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000425528.5
ENST00000450764.6
3UTR CCA 72 bp AAATGGCTTCCAGAGACCTGCTCGAGTTTCATGGGGTaGGCGTGCAGGGACACCCAGCTAATTTATGGAATG +
Preference number: 3 (lower is better)
Translates to: KWLPETCSSFMG*ACRDTQLIYGM
Trigger: CATTCCATAAATTAGCTGGGTGTCCCTGCACGCCCACCCCATGAAACTCGAGCAGGTCTCTGGAAGCCATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000425528.5
ENST00000450764.6
3UTR-3UTR CAA 90 bp AGATCCAGTGCTACGATCATGAAGTCCTTGTCGGGAGCCTCATACTGCTCAGGGTCCTTGTCTTCGTCCTaGAGCTCATTCCACTTCTGG +
Preference number: 3 (lower is better)
Translates to: RSSATIMKSLSGASYCSGSLSSS*SSFHFW
Trigger: CCAGAAGTGGAATGAGCTCAAGGACGAAGACAAGGA...CCCTGAGCAGTATGAGGCTCCCGACAAGGACTTCATGATCGTAGCACTGGATCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588491.1
ENST00000589572.5
3UTR CCA 72 bp AGGTCCTTGTCTTCGTCCTTGAGCTCATTCCACTTCTaGATCAGTGGGGGCATCAGCTTCTGGATGTATTCC +
Preference number: 3 (lower is better)
Translates to: RSLSSSLSSFHF*ISGGISFWMYS
Trigger: GGAATACATCCAGAAGCTGATGCCCCCACTGATCCAGAAGTGGAATGAGCTCAAGGACGAAGACAAGGACCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000589572.5
CDS-3UTR CCA 90 bp CCTGCCAGGAGGGCAAGTGGACGGATGGACGGACGGACGGACGGACGGGGAAGGGCCCTCGTCCCAGGGTaGCCCATGCCGCTGACCCCG +
Preference number: 4 (lower is better)
Translates to: PARRASGRMDGRTDGRGRALVPG*PMPLTP
Trigger: CGGGGTCAGCGGCATGGGCCACCCTGGGACGAGGGC...CCTTCCCCGTCCGTCCGTCCGTCCGTCCATCCGTCCACTTGCCCTCCTGGCAGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450764.6
CDS-3UTR CCA 90 bp CTGCCAGGAGGGCAAGTGGACGGATGGACGGACGGACGGACGGACGGGGAAGGCGGCCGGGGTCAGCGCTaGGTCTCTGGGGCTCCGTGT +
Preference number: 4 (lower is better)
Translates to: LPGGQVDGWTDGRTDGEGGRGQR*VSGAPC
Trigger: ACACGGAGCCCCAGAGACCCAGCGCTGACCCCGGCC...GCCTTCCCCGTCCGTCCGTCCGTCCGTCCATCCGTCCACTTGCCCTCCTGGCAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000450764.6
CDS-3UTR CCA 90 bp CTGCCAGGAGGGCAAGTGGACGGATGGACGGACGGACGGACGGACGGGGAAGGCGGCCGCTCAGCCTCGTaGGGCAGTGTGACCGTGCGT +
Preference number: 4 (lower is better)
Translates to: LPGGQVDGWTDGRTDGEGGRSAS*GSVTVR
Trigger: ACGCACGGTCACACTGCCCCACGAGGCTGAGCGGCC...GCCTTCCCCGTCCGTCCGTCCGTCCGTCCATCCGTCCACTTGCCCTCCTGGCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR TCA 90 bp CTGCCAGGAGGGCAAGTGGACGGATGGACGGACGGACGGACGGACGGGGAAGGCGGATGCCCGACTCCTTaGCCACCCACTCGGGGTGGA +
Preference number: 4 (lower is better)
Translates to: LPGGQVDGWTDGRTDGEGGCPTP*PPTRGG
Trigger: TCCACCCCGAGTGGGTGGTCAAGGAGTCGGGCATCC...GCCTTCCCCGTCCGTCCGTCCGTCCGTCCATCCGTCCACTTGCCCTCCTGGCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR TCA 90 bp CTGCCAGGAGGGCAAGTGGACGGATGGACGGACGGACGGACGGACGGGGAAGGCCCTCGGCCAGGCCGCTaGGCAGATCCAGTGCTACGA +
Preference number: 4 (lower is better)
Translates to: LPGGQVDGWTDGRTDGEGPRPGR*ADPVLR
Trigger: TCGTAGCACTGGATCTGCTCAGCGGCCTGGCCGAGG...GCCTTCCCCGTCCGTCCGTCCGTCCGTCCATCCGTCCACTTGCCCTCCTGGCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR TCA 90 bp CCTGCCAGGAGGGCAAGTGGACGGATGGACGGACGGACGGACGGACGGGGAAGGCCGCCAGCCTCTCCTTaGGCAGCGGCGGGAATTGCT +
Preference number: 4 (lower is better)
Translates to: PARRASGRMDGRTDGRGRPPASP*AAAGIA
Trigger: AGCAATTCCCGCCGCTGCTCAAGGAGAGGCTGGCGG...CCTTCCCCGTCCGTCCGTCCGTCCGTCCATCCGTCCACTTGCCCTCCTGGCAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000589149.5
CDS-3UTR TCA 90 bp CGGACGGACGGACGGACGGGGAAGGCATCTGGATTTGAGTCCCACTCACTCCTCGGTGGCCCATGCCGCTaGCCCCGGCTCCGAGCCCGA +
Preference number: 4 (lower is better)
Translates to: RTDGRTGKASGFESHSLLGGPCR*PRLRAR
Trigger: TCGGGCTCGGAGCCGGGGTCAGCGGCATGGGCCACC...GAGGAGTGAGTGGGACTCAAATCCAGATGCCTTCCCCGTCCGTCCGTCCGTCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450764.6
CDS-3UTR TCA 90 bp ATGGACGGACGGACGGACGGACGGGGAAGGCATCTGGATTTGAGTCCCACTCACCCCAGGTGGAGCCCCTaGGGCCGCGGTGGCCGCATG +
Preference number: 4 (lower is better)
Translates to: MDGRTDGRGRHLDLSPTHPRWSP*GRGGRM
Trigger: CATGCGGCCACCGCGGCCTCAGGGGCTCCACCTGGG...GTGAGTGGGACTCAAATCCAGATGCCTTCCCCGTCCGTCCGTCCGTCCGTCCAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000450764.6
CDS-3UTR CCA 90 bp AATGGTGGAGCGGCTGGCCCAGCCTCGCCGGTTATGGCACCCGCACATGCGTGTGGCGCCCAGGAGGGATaGATGGAGCAGGCCCCAGGA +
Preference number: 4 (lower is better)
Translates to: NGGAAGPASPVMAPAHACGAQEG*MEQAPG
Trigger: TCCTGGGGCCTGCTCCATCCATCCCTCCTGGGCGCC...ACACGCATGTGCGGGTGCCATAACCGGCGAGGCTGGGCCAGCCGCTCCACCATT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR TCA 90 bp AAGCCACTCTGCAGGGCGGTGGCCACCGATGACAGACACTCCAGCAGGGGGAAGGGCGGTGGCCACCGATaGCAGACACTCCAGCAGGGG +
Preference number: 4 (lower is better)
Translates to: KPLCRAVATDDRHSSRGKGGGHR*QTLQQG
Trigger: CCCCTGCTGGAGTGTCTGTCATCGGTGGCCACCGCC...CTTCCCCCTGCTGGAGTGTCTGTCATCGGTGGCCACCGCCCTGCAGAGTGGCTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000588491.1
ENST00000589572.5
CDS-3UTR TCA 90 bp CCTGCCAGGAGGGCAAGTGGACGGATGGACGGACGGACGGACGGACGGGGAAGGTGCACCAAGGCCGGATaGACTGCTGCAGCATGGGTG +
Preference number: 4 (lower is better)
Translates to: PARRASGRMDGRTDGRGRCTKAG*TAAAWV
Trigger: CACCCATGCTGCAGCAGTTCATCCGGCCTTGGTGCA...CCTTCCCCGTCCGTCCGTCCGTCCGTCCATCCGTCCACTTGCCCTCCTGGCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000589149.5
CDS-3UTR TCA 90 bp CATGGTGGCCCCACCCACCTGCCAGGAGGGCAAGTGGACGGATGGACGGACGGATGCTGCCTCTTCGAATaGGAGCCAGCCAAGCCCGGC +
Preference number: 4 (lower is better)
Translates to: HGGPTHLPGGQVDGWTDGCCLFE*EPAKPG
Trigger: GCCGGGCTTGGCTGGCTCTCATTCGAAGAGGCAGCA...TCCGTCCGTCCATCCGTCCACTTGCCCTCCTGGCAGGTGGGTGGGGCCACCATG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450764.6
CDS-3UTR TCA 90 bp CAGGGCACAGCGACTTCCGGATGCAGCGCACTCCCCAGTAATCCCTCCGACGACCTCTGGGGCTCCGTGTaGGACCCAGGTGGAGCCCCT +
Preference number: 4 (lower is better)
Translates to: QGTATSGCSALPSNPSDDLWGSV*DPGGAP
Trigger: AGGGGCTCCACCTGGGTCTCACACGGAGCCCCAGAG...GTCGTCGGAGGGATTACTGGGGAGTGCGCTGCATCCGGAAGTCGCTGTGCCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000450764.6
CDS-3UTR CCA 90 bp CATGGTGGCCCCACCCACCTGCCAGGAGGGCAAGTGGACGGATGGACGGACGGATGCAGCCCTCAGCAATaGCGCCCAGCACCAGGATGC +
Preference number: 4 (lower is better)
Translates to: HGGPTHLPGGQVDGWTDGCSPQQ*RPAPGC
Trigger: GCATCCTGGTGCTGGGCGCCATTGCTGAGGGCTGCA...TCCGTCCGTCCATCCGTCCACTTGCCCTCCTGGCAGGTGGGTGGGGCCACCATG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR CCA 90 bp CTGCCAGGAGGGCAAGTGGACGGATGGACGGACGGACGGACGGACGGGGAAGGCCTTGGATGGAGGGTCTaGCGCCCAGGAGGGATGGAT +
Preference number: 4 (lower is better)
Translates to: LPGGQVDGWTDGRTDGEGLGWRV*RPGGMD
Trigger: ATCCATCCCTCCTGGGCGCCAGACCCTCCATCCAAG...GCCTTCCCCGTCCGTCCGTCCGTCCGTCCATCCGTCCACTTGCCCTCCTGGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR CCA 90 bp CTGCCAGGAGGGCAAGTGGACGGATGGACGGACGGACGGACGGACGGGGAAGGCCTGGGTCCACAGCCCTaGGTAGGGGAGAAGGTTGAG +
Preference number: 4 (lower is better)
Translates to: LPGGQVDGWTDGRTDGEGLGPQP*VGEKVE
Trigger: CTCAACCTTCTCCCCTACCCAGGGCTGTGGACCCAG...GCCTTCCCCGTCCGTCCGTCCGTCCGTCCATCCGTCCACTTGCCCTCCTGGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356861.9
CDS-3UTR TCA 90 bp GGTGACCTCTGGCCAGCCCCAGCCACTCCAGTGGTTCTCACCCTGCGAGCTAGGCCTCGTGGGGCAGTGTaGCCGTGCGTGACTTGTGGA +
Preference number: 4 (lower is better)
Translates to: GDLWPAPATPVVLTLRARPRGAV*PCVTCG
Trigger: TCCACAAGTCACGCACGGTCACACTGCCCCACGAGG...CCTAGCTCGCAGGGTGAGAACCACTGGAGTGGCTGGGGCTGGCCAGAGGTCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR TCA 90 bp CAGGGCACAGCGACTTCCGGATGCAGCGCACTCCCCAGTAATCCCTCCGACGACGGATGCCCGACTCCTTaGCCACCCACTCGGGGTGGA +
Preference number: 4 (lower is better)
Translates to: QGTATSGCSALPSNPSDDGCPTP*PPTRGG
Trigger: TCCACCCCGAGTGGGTGGTCAAGGAGTCGGGCATCC...GTCGTCGGAGGGATTACTGGGGAGTGCGCTGCATCCGGAAGTCGCTGTGCCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000592287.5
CDS-3UTR TCA 90 bp ACAGCGACTTCCGGATGCAGCGCACTCCCCAGTAATCCCTCCGACGACGACGCAGGCGGTGGCCACCGATaGCAGACACTCCAGCAGGGG +
Preference number: 4 (lower is better)
Translates to: TATSGCSALPSNPSDDDAGGGHR*QTLQQG
Trigger: CCCCTGCTGGAGTGTCTGTCATCGGTGGCCACCGCC...TGCGTCGTCGTCGGAGGGATTACTGGGGAGTGCGCTGCATCCGGAAGTCGCTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000592287.5
CDS-3UTR TCA 90 bp CCCAGGCCCTCGGCCAGGCCGCTGAGCAGATCCAGTGCTACGATCATGAAGTCCCCTCGGCCAGGCCGCTaGGCAGATCCAGTGCTACGA +
Preference number: 4 (lower is better)
Translates to: PRPSARPLSRSSATIMKSPRPGR*ADPVLR
Trigger: TCGTAGCACTGGATCTGCTCAGCGGCCTGGCCGAGG...GGACTTCATGATCGTAGCACTGGATCTGCTCAGCGGCCTGGCCGAGGGCCTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000588491.1
ENST00000589572.5
CDS-3UTR TCA 90 bp CTGCCAGGAGGGCAAGTGGACGGATGGACGGACGGACGGACGGACGGGGAAGGCCCAAGCGGCCGATGGTaGTGGCTGTGTTTTCCAGCA +
Preference number: 4 (lower is better)
Translates to: LPGGQVDGWTDGRTDGEGPSGRW*WLCFPA
Trigger: TGCTGGAAAACACAGCCATCACCATCGGCCGCTTGG...GCCTTCCCCGTCCGTCCGTCCGTCCGTCCATCCGTCCACTTGCCCTCCTGGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000589149.5
CDS-3UTR TCA 90 bp GGACGGATGGACGGACGGACGGACGGACGGGGAAGGCATCTGGATTTGAGTCCCCCGCCAGCCTCTCCTTaGGCAGCGGCGGGAATTGCT +
Preference number: 4 (lower is better)
Translates to: GRMDGRTDGRGRHLDLSPPPASP*AAAGIA
Trigger: AGCAATTCCCGCCGCTGCTCAAGGAGAGGCTGGCGG...GGGACTCAAATCCAGATGCCTTCCCCGTCCGTCCGTCCGTCCGTCCATCCGTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000589149.5
CDS-3UTR GCA 90 bp AGGGCACAGCGACTTCCGGATGCAGCGCACTCCCCAGTAATCCCTCCGACGACGCTGCTGCAGCATGGGTaGCACCTCCTGGGGGCACAC +
Preference number: 4 (lower is better)
Translates to: RAQRLPDAAHSPVIPPTTLLQHG*HLLGAH
Trigger: GTGTGCCCCCAGGAGGTGGCACCCATGCTGCAGCAG...CGTCGTCGGAGGGATTACTGGGGAGTGCGCTGCATCCGGAAGTCGCTGTGCCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000589149.5
ENST00000592287.5
CDS-3UTR GCA 90 bp GTGGGTCCCAAGCATGTGCGTGCTGACAGGGCGACTCCCAAGGTCACCATCCTCTGGCGCAAGGCAAGCTaGGGAGGTAGGGGCCGGGGT +
Preference number: 4 (lower is better)
Translates to: VGPKHVRADRATPKVTILWRKAS*GGRGRG
Trigger: ACCCCGGCCCCTACCTCCGCAGCTTGCCTTGCGCCA...GAGGATGGTGACCTTGGGAGTCGCCCTGTCAGCACGCACATGCTTGGGACCCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450764.6
CDS-3UTR CCA 90 bp AATGGTGGAGCGGCTGGCCCAGCCTCGCCGGTTATGGCACCCGCACATGCGTGTTCCGGCTGGTTGAGGTaGTGGCCTACAGAGTCGGCC +
Preference number: 4 (lower is better)
Translates to: NGGAAGPASPVMAPAHACSGWLR*WPTESA
Trigger: GGCCGACTCTGTAGGCCACCACCTCAACCAGCCGGA...ACACGCATGTGCGGGTGCCATAACCGGCGAGGCTGGGCCAGCCGCTCCACCATT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR CCA 90 bp GCAGCGCACTCCCCAGTAATCCCTCCGACGACGACGCAGACAGAAACCTGGCAGGGCGCCCAGGAGGGATaGATGGAGCAGGCCCCAGGA +
Preference number: 4 (lower is better)
Translates to: AAHSPVIPPTTTQTETWQGAQEG*MEQAPG
Trigger: TCCTGGGGCCTGCTCCATCCATCCCTCCTGGGCGCC...CTGCCAGGTTTCTGTCTGCGTCGTCGTCGGAGGGATTACTGGGGAGTGCGCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR TCA 90 bp CCTGCCAGGAGGGCAAGTGGACGGATGGACGGACGGACGGACGGACGGGGAAGGGCAGCATGTACTGGATaGTGCTGTGCATGTGGGGGA +
Preference number: 4 (lower is better)
Translates to: PARRASGRMDGRTDGRGRAACTG*CCACGG
Trigger: TCCCCCACATGCACAGCATCATCCAGTACATGCTGC...CCTTCCCCGTCCGTCCGTCCGTCCGTCCATCCGTCCACTTGCCCTCCTGGCAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR TCA 90 bp CTGCCAGGAGGGCAAGTGGACGGATGGACGGACGGACGGACGGACGGGGAAGGCTGTATTCCGGCTGGTTaGGGTGGTGGCCTACAGAGT +
Preference number: 4 (lower is better)
Translates to: LPGGQVDGWTDGRTDGEGCIPAG*GGGLQS
Trigger: ACTCTGTAGGCCACCACCTCAACCAGCCGGAATACA...GCCTTCCCCGTCCGTCCGTCCGTCCGTCCATCCGTCCACTTGCCCTCCTGGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR TCA 90 bp ACAGCGACTTCCGGATGCAGCGCACTCCCCAGTAATCCCTCCGACGACGACGCACCTCGGCCAGGCCGCTaGGCAGATCCAGTGCTACGA +
Preference number: 4 (lower is better)
Translates to: TATSGCSALPSNPSDDDAPRPGR*ADPVLR
Trigger: TCGTAGCACTGGATCTGCTCAGCGGCCTGGCCGAGG...TGCGTCGTCGTCGGAGGGATTACTGGGGAGTGCGCTGCATCCGGAAGTCGCTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000592287.5
CDS-3UTR TCA 90 bp AATGGTGGAGCGGCTGGCCCAGCCTCGCCGGTTATGGCACCCGCACATGCGTGTGGAGACACCACCAGCTaGGGCTGCAACAAAGCTGGC +
Preference number: 4 (lower is better)
Translates to: NGGAAGPASPVMAPAHACGDTTS*GCNKAG
Trigger: GCCAGCTTTGTTGCAGCCTCAGCTGGTGGTGTCTCC...ACACGCATGTGCGGGTGCCATAACCGGCGAGGCTGGGCCAGCCGCTCCACCATT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR TCA 90 bp GGCACAGCGACTTCCGGATGCAGCGCACTCCCCAGTAATCCCTCCGACGACGACTGCAGGCACAGTCCCTaGAGAGTCCCCTTCCCCCGA +
Preference number: 4 (lower is better)
Translates to: GTATSGCSALPSNPSDDDCRHSP*RVPFPR
Trigger: TCGGGGGAAGGGGACTCTTCAGGGACTGTGCCTGCA...GTCGTCGTCGGAGGGATTACTGGGGAGTGCGCTGCATCCGGAAGTCGCTGTGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000450764.6
CDS-3UTR TCA 90 bp AGGAAGCCACTCTGCAGGGCGGTGGCCACCGATGACAGACACTCCAGCAGGGGGCAGGTACCGGCTGGTTaGGGTGGTGGCCTACAGAGT +
Preference number: 4 (lower is better)
Translates to: RKPLCRAVATDDRHSSRGQVPAG*GGGLQS
Trigger: ACTCTGTAGGCCACCACCTCAACCAGCCGGTACCTG...CCCCCTGCTGGAGTGTCTGTCATCGGTGGCCACCGCCCTGCAGAGTGGCTTCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000588491.1
CDS-3UTR GCA 90 bp GGACGGATGGACGGACGGACGGACGGACGGGGAAGGCATCTGGATTTGAGTCCCGCAGGTAGGGCACCATaGCCTGCATGCAGCCCTCAG +
Preference number: 4 (lower is better)
Translates to: GRMDGRTDGRGRHLDLSPAGRAP*PACSPQ
Trigger: CTGAGGGCTGCATGCAGGGCATGGTGCCCTACCTGC...GGGACTCAAATCCAGATGCCTTCCCCGTCCGTCCGTCCGTCCGTCCATCCGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR GCA 90 bp CAGGGCACAGCGACTTCCGGATGCAGCGCACTCCCCAGTAATCCCTCCGACGACGCAGGTAGGGCACCATaGCCTGCATGCAGCCCTCAG +
Preference number: 4 (lower is better)
Translates to: QGTATSGCSALPSNPSDDAGRAP*PACSPQ
Trigger: CTGAGGGCTGCATGCAGGGCATGGTGCCCTACCTGC...GTCGTCGGAGGGATTACTGGGGAGTGCGCTGCATCCGGAAGTCGCTGTGCCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000592287.5
CDS-3UTR GCA 90 bp CCACGTAGCTGGCCCAAGTGGGCTGCCAGAGATGACCCTATTAGAGCCCAGGGGAGGGCACCAGCTCCGTaGAGGCCTCTTCCTCCAGGG +
Preference number: 4 (lower is better)
Translates to: PRSWPKWAARDDPIRAQGRAPAP*RPLPPG
Trigger: CCCTGGAGGAAGAGGCCTGCACGGAGCTGGTGCCCT...CCCCTGGGCTCTAATAGGGTCATCTCTGGCAGCCCACTTGGGCCAGCTACGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR GCA 90 bp ACAGCGACTTCCGGATGCAGCGCACTCCCCAGTAATCCCTCCGACGACGACGCAAGGGCACCAGCTCCGTaGAGGCCTCTTCCTCCAGGG +
Preference number: 4 (lower is better)
Translates to: TATSGCSALPSNPSDDDARAPAP*RPLPPG
Trigger: CCCTGGAGGAAGAGGCCTGCACGGAGCTGGTGCCCT...TGCGTCGTCGTCGGAGGGATTACTGGGGAGTGCGCTGCATCCGGAAGTCGCTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000592287.5
CDS-3UTR GCA 90 bp GCAGCGCACTCCCCAGTAATCCCTCCGACGACGACGCAGACAGAAACCTGGCAGCTGCTGCAGCATGGGTaGCACCTCCTGGGGGCACAC +
Preference number: 4 (lower is better)
Translates to: AAHSPVIPPTTTQTETWQLLQHG*HLLGAH
Trigger: GTGTGCCCCCAGGAGGTGGCACCCATGCTGCAGCAG...CTGCCAGGTTTCTGTCTGCGTCGTCGTCGGAGGGATTACTGGGGAGTGCGCTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000589149.5
ENST00000592287.5
CDS-3UTR CCA 90 bp GGCACAGCGACTTCCGGATGCAGCGCACTCCCCAGTAATCCCTCCGACGACGACACGCAGGCGATGGCGTaGGACCGGATCTTGGGACTG +
Preference number: 4 (lower is better)
Translates to: GTATSGCSALPSNPSDDDTQAMA*DRILGL
Trigger: CAGTCCCAAGATCCGGTCCCACGCCATCGCCTGCGT...GTCGTCGTCGGAGGGATTACTGGGGAGTGCGCTGCATCCGGAAGTCGCTGTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000592287.5
CDS-3UTR CCA 90 bp TGCAGCGCACTCCCCAGTAATCCCTCCGACGACGACGCAGACAGAAACCTGGCAGGCCGCTCAGCCTCGTaGGGCAGTGTGACCGTGCGT +
Preference number: 4 (lower is better)
Translates to: CSALPSNPSDDDADRNLAGRSAS*GSVTVR
Trigger: ACGCACGGTCACACTGCCCCACGAGGCTGAGCGGCC...TGCCAGGTTTCTGTCTGCGTCGTCGTCGGAGGGATTACTGGGGAGTGCGCTGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000592287.5
CDS-3UTR CCA 90 bp CCACCCAGGCCCTCGGCCAGGCCGCTGAGCAGATCCAGTGCTACGATCATGAAGGGCTGGTTGAGGTGGTaGCCTACAGAGTCGGCCAGG +
Preference number: 4 (lower is better)
Translates to: PPRPSARPLSRSSATIMKGWLRW*PTESAR
Trigger: CCTGGCCGACTCTGTAGGCCACCACCTCAACCAGCC...CTTCATGATCGTAGCACTGGATCTGCTCAGCGGCCTGGCCGAGGGCCTGGGTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588491.1
ENST00000589572.5
CDS-3UTR CCA 90 bp AGGAAGCCACTCTGCAGGGCGGTGGCCACCGATGACAGACACTCCAGCAGGGGGCACTCTGCAGGGCGGTaGCCACCGATGACAGACACT +
Preference number: 4 (lower is better)
Translates to: RKPLCRAVATDDRHSSRGHSAGR*PPMTDT
Trigger: AGTGTCTGTCATCGGTGGCCACCGCCCTGCAGAGTG...CCCCCTGCTGGAGTGTCTGTCATCGGTGGCCACCGCCCTGCAGAGTGGCTTCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000588491.1
ENST00000589572.5
CDS-3UTR CCA 90 bp CCTGCCAGGAGGGCAAGTGGACGGATGGACGGACGGACGGACGGACGGGGAAGGGACGGAGATGAACTCTaGGTTCAGGTTGGTGCCCAG +
Preference number: 4 (lower is better)
Translates to: PARRASGRMDGRTDGRGRDGDEL*VQVGAQ
Trigger: CTGGGCACCAACCTGAACCCAGAGTTCATCTCCGTC...CCTTCCCCGTCCGTCCGTCCGTCCGTCCATCCGTCCACTTGCCCTCCTGGCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR CCA 90 bp GGATGGAGCAGGCCCCAGGATGCGAGACTCCAGTCAGACTCCAAAACACAAGGGCCCCTGAGGCCGCGGTaGCCGCATGACGACGGGAAC +
Preference number: 4 (lower is better)
Translates to: GWSRPQDARLQSDSKTQGPLRPR*PHDDGN
Trigger: GTTCCCGTCGTCATGCGGCCACCGCGGCCTCAGGGG...CCCTTGTGTTTTGGAGTCTGACTGGAGTCTCGCATCCTGGGGCCTGCTCCATCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000450764.6
CDS-3UTR TCA 90 bp GCAGCGCACTCCCCAGTAATCCCTCCGACGACGACGCAGACAGAAACCTGGCAGCACTGGCCCTCTTCTTaGGGAGCCCCGACATGGCCT +
Preference number: 4 (lower is better)
Translates to: AAHSPVIPPTTTQTETWQHWPSS*GAPTWP
Trigger: AGGCCATGTCGGGGCTCCTCAAGAAGAGGGCCAGTG...CTGCCAGGTTTCTGTCTGCGTCGTCGTCGGAGGGATTACTGGGGAGTGCGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356861.9
CDS-3UTR TCA 90 bp GCAGCGCACTCCCCAGTAATCCCTCCGACGACGACGCAGACAGAAACCTGGCAGTCCTGCACGATGCGCTaGGTGGCTGTGTTGGGCGAC +
Preference number: 4 (lower is better)
Translates to: AAHSPVIPPTTTQTETWQSCTMR*VAVLGD
Trigger: GTCGCCCAACACAGCCACTCAGCGCATCGTGCAGGA...CTGCCAGGTTTCTGTCTGCGTCGTCGTCGGAGGGATTACTGGGGAGTGCGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000592287.5
CDS-3UTR TCA 90 bp GGATGCAGCGCACTCCCCAGTAATCCCTCCGACGACGACGCAGACAGAAACCTGCCTCGGCCAGGCCGCTaGGCAGATCCAGTGCTACGA +
Preference number: 4 (lower is better)
Translates to: GCSALPSNPSDDDADRNLPRPGR*ADPVLR
Trigger: TCGTAGCACTGGATCTGCTCAGCGGCCTGGCCGAGG...CAGGTTTCTGTCTGCGTCGTCGTCGGAGGGATTACTGGGGAGTGCGCTGCATCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000592287.5
CDS-3UTR TCA 90 bp GGATGCAGCGCACTCCCCAGTAATCCCTCCGACGACGACGCAGACAGAAACCTGCCGCCAGCCTCTCCTTaGGCAGCGGCGGGAATTGCT +
Preference number: 4 (lower is better)
Translates to: GCSALPSNPSDDDADRNLPPASP*AAAGIA
Trigger: AGCAATTCCCGCCGCTGCTCAAGGAGAGGCTGGCGG...CAGGTTTCTGTCTGCGTCGTCGTCGGAGGGATTACTGGGGAGTGCGCTGCATCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000589149.5
ENST00000592287.5
CDS-3UTR TCA 90 bp GCAGCGCACTCCCCAGTAATCCCTCCGACGACGACGCAGACAGAAACCTGGCAGCCAAGCGGCCGATGGTaGTGGCTGGAATGGCAGAGG +
Preference number: 4 (lower is better)
Translates to: AAHSPVIPPTTTQTETWQPSGRW*WLEWQR
Trigger: CCTCTGCCATTCCAGCCATCACCATCGGCCGCTTGG...CTGCCAGGTTTCTGTCTGCGTCGTCGTCGGAGGGATTACTGGGGAGTGCGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592287.5
CDS-3UTR GCA 90 bp ACTTCCGGATGCAGCGCACTCCCCAGTAATCCCTCCGACGACGACGCAGACAGACCCTGCTCGTCTGGCTaGCAGTCCATGGCGCAAGGC +
Preference number: 4 (lower is better)
Translates to: TSGCSALPSNPSDDDADRPCSSG*QSMAQG
Trigger: GCCTTGCGCCATGGACTGGCAGCCAGACGAGCAGGG...TCTGTCTGCGTCGTCGTCGGAGGGATTACTGGGGAGTGCGCTGCATCCGGAAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000592287.5
CDS-3UTR GCA 90 bp GGATGCAGCGCACTCCCCAGTAATCCCTCCGACGACGACGCAGACAGAAACCTGCCCTGCTCGTCTGGCTaGCAGTCCATGGCGCAAGGC +
Preference number: 4 (lower is better)
Translates to: GCSALPSNPSDDDADRNLPCSSG*QSMAQG
Trigger: GCCTTGCGCCATGGACTGGCAGCCAGACGAGCAGGG...CAGGTTTCTGTCTGCGTCGTCGTCGGAGGGATTACTGGGGAGTGCGCTGCATCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000592287.5
CDS-3UTR GCA 90 bp ACTTCCGGATGCAGCGCACTCCCCAGTAATCCCTCCGACGACGACGCAGACAGAACCTGCTGCAGGCCCTaGTCGTCTGGCTGCCAGTCC +
Preference number: 4 (lower is better)
Translates to: TSGCSALPSNPSDDDADRTCCRP*SSGCQS
Trigger: GGACTGGCAGCCAGACGAGCAGGGCCTGCAGCAGGT...TCTGTCTGCGTCGTCGTCGGAGGGATTACTGGGGAGTGCGCTGCATCCGGAAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000592287.5
CDS-3UTR GCA 90 bp ATGGACGGACGGACGGACGGACGGGGAAGGCATCTGGATTTGAGTCCCACTCACACCTGCTGCAGGCCCTaGTCGTCTGGCTGCCAGTCC +
Preference number: 4 (lower is better)
Translates to: MDGRTDGRGRHLDLSPTHTCCRP*SSGCQS
Trigger: GGACTGGCAGCCAGACGAGCAGGGCCTGCAGCAGGT...GTGAGTGGGACTCAAATCCAGATGCCTTCCCCGTCCGTCCGTCCGTCCGTCCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR GCA 90 bp TCCGGATGCAGCGCACTCCCCAGTAATCCCTCCGACGACGACGCAGACAGAAACACCTGCTGCAGGCCCTaGTCGTCTGGCTGCCAGTCC +
Preference number: 4 (lower is better)
Translates to: SGCSALPSNPSDDDADRNTCCRP*SSGCQS
Trigger: GGACTGGCAGCCAGACGAGCAGGGCCTGCAGCAGGT...GTTTCTGTCTGCGTCGTCGTCGGAGGGATTACTGGGGAGTGCGCTGCATCCGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000592287.5
CDS-3UTR GCA 90 bp CTGCCAGGAGGGCAAGTGGACGGATGGACGGACGGACGGACGGACGGGGAAGGCTGGTCCTGGGTCCTCTaGAGCATGTACTGGATGATG +
Preference number: 4 (lower is better)
Translates to: LPGGQVDGWTDGRTDGEGWSWVL*SMYWMM
Trigger: CATCATCCAGTACATGCTGCAGAGGACCCAGGACCA...GCCTTCCCCGTCCGTCCGTCCGTCCGTCCATCCGTCCACTTGCCCTCCTGGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR GCA 90 bp CAGGGCACAGCGACTTCCGGATGCAGCGCACTCCCCAGTAATCCCTCCGACGACCGTGGCTTGATGTCCTaGTCACTGTCGGGGACAGCC +
Preference number: 4 (lower is better)
Translates to: QGTATSGCSALPSNPSDDRGLMS*SLSGTA
Trigger: GGCTGTCCCCGACAGTGAGCAGGACATCAAGCCACG...GTCGTCGGAGGGATTACTGGGGAGTGCGCTGCATCCGGAAGTCGCTGTGCCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000592287.5
CDS-3UTR GCA 90 bp GGTGACCTCTGGCCAGCCCCAGCCACTCCAGTGGTTCTCACCCTGCGAGCTAGGCAGAGTCGGCCAGGGTaGCAATGGCGTCATAGAGGA +
Preference number: 4 (lower is better)
Translates to: GDLWPAPATPVVLTLRARQSRPG*QWRHRG
Trigger: TCCTCTATGACGCCATTGGCACCCTGGCCGACTCTG...CCTAGCTCGCAGGGTGAGAACCACTGGAGTGGCTGGGGCTGGCCAGAGGTCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR GCA 90 bp GGCACAGCGACTTCCGGATGCAGCGCACTCCCCAGTAATCCCTCCGACGACGACAGGGCAAAGGAGCTCTaGCGGACCTCAGGCATCGAG +
Preference number: 4 (lower is better)
Translates to: GTATSGCSALPSNPSDDDRAKEL*RTSGIE
Trigger: CTCGATGCCTGAGGTCCGGCAGAGCTCCTTTGCCCT...GTCGTCGTCGGAGGGATTACTGGGGAGTGCGCTGCATCCGGAAGTCGCTGTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000592287.5
CDS-3UTR GCA 90 bp CGGACGGACGGACGGACGGGGAAGGCATCTGGATTTGAGTCCCACTCACTCCTCGGCCGGATGAACTGCTaGAGCATGGGTGCCACCTCC +
Preference number: 4 (lower is better)
Translates to: RTDGRTGKASGFESHSLLGRMNC*SMGATS
Trigger: GGAGGTGGCACCCATGCTGCAGCAGTTCATCCGGCC...GAGGAGTGAGTGGGACTCAAATCCAGATGCCTTCCCCGTCCGTCCGTCCGTCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000589149.5
CDS-3UTR GCA 90 bp GCAGCGCACTCCCCAGTAATCCCTCCGACGACGACGCAGACAGAAACCTGGCAGGGCCGGATGAACTGCTaGAGCATGGGTGCCACCTCC +
Preference number: 4 (lower is better)
Translates to: AAHSPVIPPTTTQTETWQGRMNC*SMGATS
Trigger: GGAGGTGGCACCCATGCTGCAGCAGTTCATCCGGCC...CTGCCAGGTTTCTGTCTGCGTCGTCGTCGGAGGGATTACTGGGGAGTGCGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000589149.5
ENST00000592287.5
CDS-3UTR GCA 90 bp AGGGCACAGCGACTTCCGGATGCAGCGCACTCCCCAGTAATCCCTCCGACGACGCAAGGCCGGATGAACTaGTGCAGCATGGGTGCCACC +
Preference number: 4 (lower is better)
Translates to: RAQRLPDAAHSPVIPPTTQGRMN*CSMGAT
Trigger: GGTGGCACCCATGCTGCAGCAGTTCATCCGGCCTTG...CGTCGTCGGAGGGATTACTGGGGAGTGCGCTGCATCCGGAAGTCGCTGTGCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000589149.5
ENST00000592287.5
CDS-3UTR GCA 90 bp CAGGGCACAGCGACTTCCGGATGCAGCGCACTCCCCAGTAATCCCTCCGACGACGAGCAGGCCCCAGGATaGGAGACTCCAGTCAGACTC +
Preference number: 4 (lower is better)
Translates to: QGTATSGCSALPSNPSDDEQAPG*ETPVRL
Trigger: GAGTCTGACTGGAGTCTCGCATCCTGGGGCCTGCTC...GTCGTCGGAGGGATTACTGGGGAGTGCGCTGCATCCGGAAGTCGCTGTGCCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR GCA 90 bp TGCAGCGCACTCCCCAGTAATCCCTCCGACGACGACGCAGACAGAAACCTGGCAGGCGGCAACTCGCGCTaGGGCTTCTCCAGAGACTCG +
Preference number: 4 (lower is better)
Translates to: CSALPSNPSDDDADRNLAGGNSR*GFSRDS
Trigger: CGAGTCTCTGGAGAAGCCGCAGCGCGAGTTGCCGCC...TGCCAGGTTTCTGTCTGCGTCGTCGTCGGAGGGATTACTGGGGAGTGCGCTGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592287.5
CDS-3UTR CCA 90 bp GGTCAGCTGTGTAATTCCTCCCTCCCACGTAGCTGGCCCAAGTGGGCTGCCAGACAGGCCCTGCTCGTCTaGCTGCCAGTCCATGGCGCA +
Preference number: 4 (lower is better)
Translates to: GQLCNSSLPRSWPKWAARQALLV*LPVHGA
Trigger: TGCGCCATGGACTGGCAGCCAGACGAGCAGGGCCTG...TCTGGCAGCCCACTTGGGCCAGCTACGTGGGAGGGAGGAATTACACAGCTGACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR CCA 90 bp ATCCTCCGAGTTAAGCAGGTTGCAGAGCTGGGGCAGCAGCTCGGGCCACATCTGCAGGCCCTGCTCGTCTaGCTGCCAGTCCATGGCGCA +
Preference number: 4 (lower is better)
Translates to: ILRVKQVAELGQQLGPHLQALLV*LPVHGA
Trigger: TGCGCCATGGACTGGCAGCCAGACGAGCAGGGCCTG...CAGATGTGGCCCGAGCTGCTGCCCCAGCTCTGCAACCTGCTTAACTCGGAGGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586775.5
ENST00000587654.5
CDS-3UTR CCA 90 bp GGCACAGCGACTTCCGGATGCAGCGCACTCCCCAGTAATCCCTCCGACGACGACGCACGATGCGCTGAGTaGCTGTGTTGGGCGACTGTG +
Preference number: 4 (lower is better)
Translates to: GTATSGCSALPSNPSDDDARCAE*LCWATV
Trigger: CACAGTCGCCCAACACAGCCACTCAGCGCATCGTGC...GTCGTCGTCGGAGGGATTACTGGGGAGTGCGCTGCATCCGGAAGTCGCTGTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000592287.5
CDS-3UTR CCA 90 bp ACTTCCGGATGCAGCGCACTCCCCAGTAATCCCTCCGACGACGACGCAGACAGAAGCAGGTTGCAGAGCTaGGGCAGCAGCTCGGGCCAC +
Preference number: 4 (lower is better)
Translates to: TSGCSALPSNPSDDDADRSRLQS*GSSSGH
Trigger: GTGGCCCGAGCTGCTGCCCCAGCTCTGCAACCTGCT...TCTGTCTGCGTCGTCGTCGGAGGGATTACTGGGGAGTGCGCTGCATCCGGAAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000592287.5
CDS-3UTR CCA 90 bp AGGGCACAGCGACTTCCGGATGCAGCGCACTCCCCAGTAATCCCTCCGACGACGGGACTTCCTTGCAGATaGGCTGCTCGGCCAGCGTCA +
Preference number: 4 (lower is better)
Translates to: RAQRLPDAAHSPVIPPTTGLPCR*AARPAS
Trigger: TGACGCTGGCCGAGCAGCCCATCTGCAAGGAAGTCC...CGTCGTCGGAGGGATTACTGGGGAGTGCGCTGCATCCGGAAGTCGCTGTGCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000592287.5
CDS-3UTR CCA 90 bp CATGGTGGCCCCACCCACCTGCCAGGAGGGCAAGTGGACGGATGGACGGACGGATTATCCGACAGGCACTaGATCAGGTGCGGGATCAGC +
Preference number: 4 (lower is better)
Translates to: HGGPTHLPGGQVDGWTDGLSDRH*IRCGIS
Trigger: GCTGATCCCGCACCTGATCCAGTGCCTGTCGGATAA...TCCGTCCGTCCATCCGTCCACTTGCCCTCCTGGCAGGTGGGTGGGGCCACCATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR CCA 90 bp GCAGCGCACTCCCCAGTAATCCCTCCGACGACGACGCAGACAGAAACCTGGCAGGCGTCCAGCAGGCGATaGAGCGGACCAAGGCCTTCT +
Preference number: 4 (lower is better)
Translates to: AAHSPVIPPTTTQTETWQASSRR*SGPRPS
Trigger: AGAAGGCCTTGGTCCGCTCCATCGCCTGCTGGACGC...CTGCCAGGTTTCTGTCTGCGTCGTCGTCGGAGGGATTACTGGGGAGTGCGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000592287.5
CDS-3UTR CCA 90 bp ACAGCGACTTCCGGATGCAGCGCACTCCCCAGTAATCCCTCCGACGACGACGCATCCGGCTGGTTGAGGTaGTGGCCTACAGAGTCGGCC +
Preference number: 4 (lower is better)
Translates to: TATSGCSALPSNPSDDDASGWLR*WPTESA
Trigger: GGCCGACTCTGTAGGCCACCACCTCAACCAGCCGGA...TGCGTCGTCGTCGGAGGGATTACTGGGGAGTGCGCTGCATCCGGAAGTCGCTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000592287.5
CDS-3UTR CCA 90 bp GGCACAGCGACTTCCGGATGCAGCGCACTCCCCAGTAATCCCTCCGACGACGACCACTCTGCAGGGCGGTaGCCACCGATGACAGACACT +
Preference number: 4 (lower is better)
Translates to: GTATSGCSALPSNPSDDDHSAGR*PPMTDT
Trigger: AGTGTCTGTCATCGGTGGCCACCGCCCTGCAGAGTG...GTCGTCGTCGGAGGGATTACTGGGGAGTGCGCTGCATCCGGAAGTCGCTGTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000592287.5
CDS-3UTR CCA 90 bp CAGGGCACAGCGACTTCCGGATGCAGCGCACTCCCCAGTAATCCCTCCGACGACCGTAGCTGGCCCAAGTaGGCTGCCAGAGATGACCCT +
Preference number: 4 (lower is better)
Translates to: QGTATSGCSALPSNPSDDRSWPK*AARDDP
Trigger: AGGGTCATCTCTGGCAGCCCACTTGGGCCAGCTACG...GTCGTCGGAGGGATTACTGGGGAGTGCGCTGCATCCGGAAGTCGCTGTGCCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR CCA 90 bp CGGACGGACGGACGGACGGGGAAGGCATCTGGATTTGAGTCCCACTCACTCCTCATGCAGTCGGGGAAATaGTGGAGCGGCTGGCCCAGC +
Preference number: 4 (lower is better)
Translates to: RTDGRTGKASGFESHSLLMQSGK*WSGWPS
Trigger: GCTGGGCCAGCCGCTCCACCATTTCCCCGACTGCAT...GAGGAGTGAGTGGGACTCAAATCCAGATGCCTTCCCCGTCCGTCCGTCCGTCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR CCA 90 bp GGCACAGCGACTTCCGGATGCAGCGCACTCCCCAGTAATCCCTCCGACGACGACCCCCAGCCACTCCAGTaGTTCTCACCCTGCGAGCTA +
Preference number: 4 (lower is better)
Translates to: GTATSGCSALPSNPSDDDPQPLQ*FSPCEL
Trigger: TAGCTCGCAGGGTGAGAACCACTGGAGTGGCTGGGG...GTCGTCGTCGGAGGGATTACTGGGGAGTGCGCTGCATCCGGAAGTCGCTGTGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR CCA 90 bp AGGGCACAGCGACTTCCGGATGCAGCGCACTCCCCAGTAATCCCTCCGACGACGCCCCAGCCACTCCAGTaGTTCTCACCCTGCGAGCTA +
Preference number: 4 (lower is better)
Translates to: RAQRLPDAAHSPVIPPTTPQPLQ*FSPCEL
Trigger: TAGCTCGCAGGGTGAGAACCACTGGAGTGGCTGGGG...CGTCGTCGGAGGGATTACTGGGGAGTGCGCTGCATCCGGAAGTCGCTGTGCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR TCA 90 bp ACTTCCGGATGCAGCGCACTCCCCAGTAATCCCTCCGACGACGACGCAGACAGATCCTGCACGATGCGCTaGGTGGCTGTGTTGGGCGAC +
Preference number: 4 (lower is better)
Translates to: TSGCSALPSNPSDDDADRSCTMR*VAVLGD
Trigger: GTCGCCCAACACAGCCACTCAGCGCATCGTGCAGGA...TCTGTCTGCGTCGTCGTCGGAGGGATTACTGGGGAGTGCGCTGCATCCGGAAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000592287.5
CDS-3UTR TCA 90 bp CATGGTGGCCCCACCCACCTGCCAGGAGGGCAAGTGGACGGATGGACGGACGGATGGGACTGCAGTGCTTaGAGAACTGCAGGAACTTGG +
Preference number: 4 (lower is better)
Translates to: HGGPTHLPGGQVDGWTDGWDCSA*RTAGTW
Trigger: CCAAGTTCCTGCAGTTCTTCAAGCACTGCAGTCCCA...TCCGTCCGTCCATCCGTCCACTTGCCCTCCTGGCAGGTGGGTGGGGCCACCATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR TCA 90 bp GGACGGATGGACGGACGGACGGACGGACGGGGAAGGCATCTGGATTTGAGTCCCCAGTGTGACCGTGCGTaGCTTGTGGAAGCGTGGCTT +
Preference number: 4 (lower is better)
Translates to: GRMDGRTDGRGRHLDLSPQCDRA*LVEAWL
Trigger: AAGCCACGCTTCCACAAGTCACGCACGGTCACACTG...GGGACTCAAATCCAGATGCCTTCCCCGTCCGTCCGTCCGTCCGTCCATCCGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR TCA 90 bp CAGGGCACAGCGACTTCCGGATGCAGCGCACTCCCCAGTAATCCCTCCGACGACCAGTGTGACCGTGCGTaGCTTGTGGAAGCGTGGCTT +
Preference number: 4 (lower is better)
Translates to: QGTATSGCSALPSNPSDDQCDRA*LVEAWL
Trigger: AAGCCACGCTTCCACAAGTCACGCACGGTCACACTG...GTCGTCGGAGGGATTACTGGGGAGTGCGCTGCATCCGGAAGTCGCTGTGCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000592287.5
CDS-3UTR TCA 90 bp GCACTCCCCAGTAATCCCTCCGACGACGACGCAGACAGAAACCTGGCAGTCTCCCCTCGTGGGGCAGTGTaGCCGTGCGTGACTTGTGGA +
Preference number: 4 (lower is better)
Translates to: ALPSNPSDDDADRNLAVSPRGAV*PCVTCG
Trigger: TCCACAAGTCACGCACGGTCACACTGCCCCACGAGG...GGAGACTGCCAGGTTTCTGTCTGCGTCGTCGTCGGAGGGATTACTGGGGAGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000592287.5
CDS-3UTR TCA 90 bp CCACGTAGCTGGCCCAAGTGGGCTGCCAGAGATGACCCTATTAGAGCCCAGGGGTGTCCAGGATGTAGCTaGGGTAGGGCACCAGCTCCG +
Preference number: 4 (lower is better)
Translates to: PRSWPKWAARDDPIRAQGCPGCS*GRAPAP
Trigger: CGGAGCTGGTGCCCTACCTCAGCTACATCCTGGACA...CCCCTGGGCTCTAATAGGGTCATCTCTGGCAGCCCACTTGGGCCAGCTACGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR TCA 90 bp GGTGACCTCTGGCCAGCCCCAGCCACTCCAGTGGTTCTCACCCTGCGAGCTAGGGTGTACATCATGGCCTaGGCCAGTGTCTTCTGCACC +
Preference number: 4 (lower is better)
Translates to: GDLWPAPATPVVLTLRARVYIMA*ASVFCT
Trigger: GGTGCAGAAGACACTGGCTCAGGCCATGATGTACAC...CCTAGCTCGCAGGGTGAGAACCACTGGAGTGGCTGGGGCTGGCCAGAGGTCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR TCA 90 bp CCACTCTGCAGGGCGGTGGCCACCGATGACAGACACTCCAGCAGGGGGAAGAGGGTGTACATCATGGCCTaGGCCAGTGTCTTCTGCACC +
Preference number: 4 (lower is better)
Translates to: PLCRAVATDDRHSSRGKRVYIMA*ASVFCT
Trigger: GGTGCAGAAGACACTGGCTCAGGCCATGATGTACAC...CCTCTTCCCCCTGCTGGAGTGTCTGTCATCGGTGGCCACCGCCCTGCAGAGTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000588491.1
ENST00000589572.5
CDS-3UTR TCA 90 bp GGCACAGCGACTTCCGGATGCAGCGCACTCCCCAGTAATCCCTCCGACGACGACTGCCCAGAATGGGCATaGACTCGGCGATACAGGGCT +
Preference number: 4 (lower is better)
Translates to: GTATSGCSALPSNPSDDDCPEWA*TRRYRA
Trigger: AGCCCTGTATCGCCGAGTTCATGCCCATTCTGGGCA...GTCGTCGTCGGAGGGATTACTGGGGAGTGCGCTGCATCCGGAAGTCGCTGTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000592287.5
CDS-3UTR TCA 90 bp GACGGACGGACGGACGGACGGGGAAGGCATCTGGATTTGAGTCCCACTCACTCCTGCACCAAGGCCGGATaGACTGCTGCAGCATGGGTG +
Preference number: 4 (lower is better)
Translates to: DGRTDGRGRHLDLSPTHSCTKAG*TAAAWV
Trigger: CACCCATGCTGCAGCAGTTCATCCGGCCTTGGTGCA...GGAGTGAGTGGGACTCAAATCCAGATGCCTTCCCCGTCCGTCCGTCCGTCCGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000589149.5
CDS-3UTR TCA 90 bp ACAGCGACTTCCGGATGCAGCGCACTCCCCAGTAATCCCTCCGACGACGACGCATGCACCAAGGCCGGATaGACTGCTGCAGCATGGGTG +
Preference number: 4 (lower is better)
Translates to: TATSGCSALPSNPSDDDACTKAG*TAAAWV
Trigger: CACCCATGCTGCAGCAGTTCATCCGGCCTTGGTGCA...TGCGTCGTCGTCGGAGGGATTACTGGGGAGTGCGCTGCATCCGGAAGTCGCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000589149.5
ENST00000592287.5
CDS-3UTR TCA 90 bp GCAGCGCACTCCCCAGTAATCCCTCCGACGACGACGCAGACAGAAACCTGGCAGGATGCCGCGGAAGGCTaGGTCCTTCTCCTCGTTGTC +
Preference number: 4 (lower is better)
Translates to: AAHSPVIPPTTTQTETWQDAAEG*VLLLVV
Trigger: GACAACGAGGAGAAGGACTCAGCCTTCCGCGGCATC...CTGCCAGGTTTCTGTCTGCGTCGTCGTCGGAGGGATTACTGGGGAGTGCGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000589149.5
ENST00000592287.5
CDS-3UTR TCA 90 bp ATCTCTGGGCTCACTGGGTACTATGATGAGCAGGAAGTCCCAGGGAGATGGAATGCCGCGGTGGCCGCATaGCGACGGGAACGCCCTCGG +
Preference number: 4 (lower is better)
Translates to: ISGLTGYYDEQEVPGRWNAAVAA*RRERPR
Trigger: CCGAGGGCGTTCCCGTCGTCATGCGGCCACCGCGGC...ATTCCATCTCCCTGGGACTTCCTGCTCATCATAGTACCCAGTGAGCCCAGAGAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450764.6
CDS-3UTR GCA 90 bp GTAATCCTCCGAGTTAAGCAGGTTGCAGAGCTGGGGCAGCAGCTCGGGCCACATCCCTGCTCGTCTGGCTaGCAGTCCATGGCGCAAGGC +
Preference number: 4 (lower is better)
Translates to: VILRVKQVAELGQQLGPHPCSSG*QSMAQG
Trigger: GCCTTGCGCCATGGACTGGCAGCCAGACGAGCAGGG...ATGTGGCCCGAGCTGCTGCCCCAGCTCTGCAACCTGCTTAACTCGGAGGATTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586775.5
ENST00000587654.5
CDS-3UTR GCA 90 bp GCACTCCCCAGTAATCCCTCCGACGACGACGCAGACAGAAACCTGGCAGTCTCCGCAGGTAGGGCACCATaGCCTGCATGCAGCCCTCAG +
Preference number: 4 (lower is better)
Translates to: ALPSNPSDDDADRNLAVSAGRAP*PACSPQ
Trigger: CTGAGGGCTGCATGCAGGGCATGGTGCCCTACCTGC...GGAGACTGCCAGGTTTCTGTCTGCGTCGTCGTCGGAGGGATTACTGGGGAGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000592287.5
CDS-3UTR GCA 90 bp CAGGGCACAGCGACTTCCGGATGCAGCGCACTCCCCAGTAATCCCTCCGACGACCAGAGTCGGCCAGGGTaGCAATGGCGTCATAGAGGA +
Preference number: 4 (lower is better)
Translates to: QGTATSGCSALPSNPSDDQSRPG*QWRHRG
Trigger: TCCTCTATGACGCCATTGGCACCCTGGCCGACTCTG...GTCGTCGGAGGGATTACTGGGGAGTGCGCTGCATCCGGAAGTCGCTGTGCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000592287.5
CDS-3UTR GCA 90 bp GACGGACGGACGGGGAAGGCATCTGGATTTGAGTCCCACTCACTCCTCCCTAACGGCAGGAAGCCACTCTaGAGGGCGGTGGCCACCGAT +
Preference number: 4 (lower is better)
Translates to: DGRTGKASGFESHSLLPNGRKPL*RAVATD
Trigger: ATCGGTGGCCACCGCCCTGCAGAGTGGCTTCCTGCC...GTTAGGGAGGAGTGAGTGGGACTCAAATCCAGATGCCTTCCCCGTCCGTCCGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR GCA 90 bp CACTCCCCAGTAATCCCTCCGACGACGACGCAGACAGAAACCTGGCAGTCTCCAGGCAGGAAGCCACTCTaGAGGGCGGTGGCCACCGAT +
Preference number: 4 (lower is better)
Translates to: HSPVIPPTTTQTETWQSPGRKPL*RAVATD
Trigger: ATCGGTGGCCACCGCCCTGCAGAGTGGCTTCCTGCC...TGGAGACTGCCAGGTTTCTGTCTGCGTCGTCGTCGGAGGGATTACTGGGGAGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000592287.5
CDS-3UTR GCA 90 bp CCACCCAGGCCCTCGGCCAGGCCGCTGAGCAGATCCAGTGCTACGATCATGAAGTCGGGAGCCTCATACTaGTCAGGGTGCTGGGTGTAC +
Preference number: 4 (lower is better)
Translates to: PPRPSARPLSRSSATIMKSGASY*SGCWVY
Trigger: GTACACCCAGCACCCTGAGCAGTATGAGGCTCCCGA...CTTCATGATCGTAGCACTGGATCTGCTCAGCGGCCTGGCCGAGGGCCTGGGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588491.1
ENST00000589572.5
CDS-3UTR GCA 90 bp AAGCCACTCTGCAGGGCGGTGGCCACCGATGACAGACACTCCAGCAGGGGGAAGTCGGGAGCCTCATACTaGTCAGGGTGCTGGGTGTAC +
Preference number: 4 (lower is better)
Translates to: KPLCRAVATDDRHSSRGKSGASY*SGCWVY
Trigger: GTACACCCAGCACCCTGAGCAGTATGAGGCTCCCGA...CTTCCCCCTGCTGGAGTGTCTGTCATCGGTGGCCACCGCCCTGCAGAGTGGCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000588491.1
ENST00000589572.5
CDS-3UTR GCA 90 bp CACTCCCCAGTAATCCCTCCGACGACGACGCAGACAGAAACCTGGCAGTCTCCACTGCTGCAGCATGGGTaGCACCTCCTGGGGGCACAC +
Preference number: 4 (lower is better)
Translates to: HSPVIPPTTTQTETWQSPLLQHG*HLLGAH
Trigger: GTGTGCCCCCAGGAGGTGGCACCCATGCTGCAGCAG...TGGAGACTGCCAGGTTTCTGTCTGCGTCGTCGTCGGAGGGATTACTGGGGAGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000589149.5
ENST00000592287.5
CDS-3UTR GCA 90 bp GTGGGTCCCAAGCATGTGCGTGCTGACAGGGCGACTCCCAAGGTCACCATCCTCCAAGGCCGGATGAACTaGTGCAGCATGGGTGCCACC +
Preference number: 4 (lower is better)
Translates to: VGPKHVRADRATPKVTILQGRMN*CSMGAT
Trigger: GGTGGCACCCATGCTGCAGCAGTTCATCCGGCCTTG...GAGGATGGTGACCTTGGGAGTCGCCCTGTCAGCACGCACATGCTTGGGACCCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR GCA 90 bp GACGGACGGACGGACGGACGGGGAAGGCATCTGGATTTGAGTCCCACTCACTCCCAAGGCCGGATGAACTaGTGCAGCATGGGTGCCACC +
Preference number: 4 (lower is better)
Translates to: DGRTDGRGRHLDLSPTHSQGRMN*CSMGAT
Trigger: GGTGGCACCCATGCTGCAGCAGTTCATCCGGCCTTG...GGAGTGAGTGGGACTCAAATCCAGATGCCTTCCCCGTCCGTCCGTCCGTCCGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000589149.5
CDS-3UTR GCA 90 bp CAGGGCACAGCGACTTCCGGATGCAGCGCACTCCCCAGTAATCCCTCCGACGACAGCAGCGGCGGGAATTaGTCAGAGAACTGCTGCCAG +
Preference number: 4 (lower is better)
Translates to: QGTATSGCSALPSNPSDDSSGGN*SENCCQ
Trigger: CTGGCAGCAGTTCTCTGAGCAATTCCCGCCGCTGCT...GTCGTCGGAGGGATTACTGGGGAGTGCGCTGCATCCGGAAGTCGCTGTGCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000589149.5
ENST00000592287.5
CDS-3UTR GCA 90 bp GGACGGATGGACGGACGGACGGACGGACGGGGAAGGCATCTGGATTTGAGTCCCTATGGCACCCGCACATaGGTGTGGCCATGTGTGTCC +
Preference number: 4 (lower is better)
Translates to: GRMDGRTDGRGRHLDLSPYGTRT*VWPCVS
Trigger: GGACACACATGGCCACACGCATGTGCGGGTGCCATA...GGGACTCAAATCCAGATGCCTTCCCCGTCCGTCCGTCCGTCCGTCCATCCGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR GCA 90 bp GTAATCCTCCGAGTTAAGCAGGTTGCAGAGCTGGGGCAGCAGCTCGGGCCACATGGCGGCAACTCGCGCTaGGGCTTCTCCAGAGACTCG +
Preference number: 4 (lower is better)
Translates to: VILRVKQVAELGQQLGPHGGNSR*GFSRDS
Trigger: CGAGTCTCTGGAGAAGCCGCAGCGCGAGTTGCCGCC...ATGTGGCCCGAGCTGCTGCCCCAGCTCTGCAACCTGCTTAACTCGGAGGATTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587654.5
CDS-3UTR CCA 90 bp GCGTCACTGTCCAGAAGCTCTGATGAGTCTTCACAGATCTTCTGCAGGGCTCCAAGCCCCGACATGGCCTaGCTCCGAGGCCCCACCCCC +
Preference number: 4 (lower is better)
Translates to: ASLSRSSDESSQIFCRAPSPDMA*LRGPTP
Trigger: GGGGGTGGGGCCTCGGAGCCAGGCCATGTCGGGGCT...TGGAGCCCTGCAGAAGATCTGTGAAGACTCATCAGAGCTTCTGGACAGTGACGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586775.5
CDS-3UTR CCA 90 bp GGATGGAGCAGGCCCCAGGATGCGAGACTCCAGTCAGACTCCAAAACACAAGGGCAGGCCCTGCTCGTCTaGCTGCCAGTCCATGGCGCA +
Preference number: 4 (lower is better)
Translates to: GWSRPQDARLQSDSKTQGQALLV*LPVHGA
Trigger: TGCGCCATGGACTGGCAGCCAGACGAGCAGGGCCTG...CCCTTGTGTTTTGGAGTCTGACTGGAGTCTCGCATCCTGGGGCCTGCTCCATCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR CCA 90 bp GGATGCAGCGCACTCCCCAGTAATCCCTCCGACGACGACGCAGACAGAAACCTGGGTTCACGCAGGCGATaGCGTGGGACCGGATCTTGG +
Preference number: 4 (lower is better)
Translates to: GCSALPSNPSDDDADRNLGSRRR*RGTGSW
Trigger: CCAAGATCCGGTCCCACGCCATCGCCTGCGTGAACC...CAGGTTTCTGTCTGCGTCGTCGTCGGAGGGATTACTGGGGAGTGCGCTGCATCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000592287.5
CDS-3UTR CCA 90 bp CAGGGCACAGCGACTTCCGGATGCAGCGCACTCCCCAGTAATCCCTCCGACGACCGGTCCATGATGAACTaGTTCACGCAGGCGATGGCG +
Preference number: 4 (lower is better)
Translates to: QGTATSGCSALPSNPSDDRSMMN*FTQAMA
Trigger: CGCCATCGCCTGCGTGAACCAGTTCATCATGGACCG...GTCGTCGGAGGGATTACTGGGGAGTGCGCTGCATCCGGAAGTCGCTGTGCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000592287.5
CDS-3UTR CCA 90 bp AGGGCACAGCGACTTCCGGATGCAGCGCACTCCCCAGTAATCCCTCCGACGACGTTGTCCATCAGCGCCTaGGCCCGGTCCATGATGAAC +
Preference number: 4 (lower is better)
Translates to: RAQRLPDAAHSPVIPPTTLSISA*ARSMMN
Trigger: GTTCATCATGGACCGGGCCCAGGCGCTGATGGACAA...CGTCGTCGGAGGGATTACTGGGGAGTGCGCTGCATCCGGAAGTCGCTGTGCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000592287.5
CDS-3UTR CCA 90 bp CAGGGCACAGCGACTTCCGGATGCAGCGCACTCCCCAGTAATCCCTCCGACGACTTGTCCATCAGCGCCTaGGCCCGGTCCATGATGAAC +
Preference number: 4 (lower is better)
Translates to: QGTATSGCSALPSNPSDDLSISA*ARSMMN
Trigger: GTTCATCATGGACCGGGCCCAGGCGCTGATGGACAA...GTCGTCGGAGGGATTACTGGGGAGTGCGCTGCATCCGGAAGTCGCTGTGCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000592287.5
CDS-3UTR CCA 90 bp GTGGGTCCCAAGCATGTGCGTGCTGACAGGGCGACTCCCAAGGTCACCATCCTCGGACTTCCTTGCAGATaGGCTGCTCGGCCAGCGTCA +
Preference number: 4 (lower is better)
Translates to: VGPKHVRADRATPKVTILGLPCR*AARPAS
Trigger: TGACGCTGGCCGAGCAGCCCATCTGCAAGGAAGTCC...GAGGATGGTGACCTTGGGAGTCGCCCTGTCAGCACGCACATGCTTGGGACCCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR CCA 90 bp AATGGTGGAGCGGCTGGCCCAGCCTCGCCGGTTATGGCACCCGCACATGCGTGTTTATCCGACAGGCACTaGATCAGGTGCGGGATCAGC +
Preference number: 4 (lower is better)
Translates to: NGGAAGPASPVMAPAHACLSDRH*IRCGIS
Trigger: GCTGATCCCGCACCTGATCCAGTGCCTGTCGGATAA...ACACGCATGTGCGGGTGCCATAACCGGCGAGGCTGGGCCAGCCGCTCCACCATT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR CCA 90 bp ACGGACGGACGGACGGGGAAGGCATCTGGATTTGAGTCCCACTCACTCCTCCCTGCGTCCAGCAGGCGATaGAGCGGACCAAGGCCTTCT +
Preference number: 4 (lower is better)
Translates to: TDGRTGKASGFESHSLLPASSRR*SGPRPS
Trigger: AGAAGGCCTTGGTCCGCTCCATCGCCTGCTGGACGC...AGGGAGGAGTGAGTGGGACTCAAATCCAGATGCCTTCCCCGTCCGTCCGTCCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR CCA 90 bp TCCGGATGCAGCGCACTCCCCAGTAATCCCTCCGACGACGACGCAGACAGAAACTCCGGCTGGTTGAGGTaGTGGCCTACAGAGTCGGCC +
Preference number: 4 (lower is better)
Translates to: SGCSALPSNPSDDDADRNSGWLR*WPTESA
Trigger: GGCCGACTCTGTAGGCCACCACCTCAACCAGCCGGA...GTTTCTGTCTGCGTCGTCGTCGGAGGGATTACTGGGGAGTGCGCTGCATCCGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000592287.5
CDS-3UTR CCA 90 bp GTGGGTCCCAAGCATGTGCGTGCTGACAGGGCGACTCCCAAGGTCACCATCCTCCACTCTGCAGGGCGGTaGCCACCGATGACAGACACT +
Preference number: 4 (lower is better)
Translates to: VGPKHVRADRATPKVTILHSAGR*PPMTDT
Trigger: AGTGTCTGTCATCGGTGGCCACCGCCCTGCAGAGTG...GAGGATGGTGACCTTGGGAGTCGCCCTGTCAGCACGCACATGCTTGGGACCCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR CCA 90 bp ACGGACGGACGGACGGGGAAGGCATCTGGATTTGAGTCCCACTCACTCCTCCCTCAGCCTCGCCGGTTATaGCACCCGCACATGCGTGTG +
Preference number: 4 (lower is better)
Translates to: TDGRTGKASGFESHSLLPQPRRL*HPHMRV
Trigger: CACACGCATGTGCGGGTGCCATAACCGGCGAGGCTG...AGGGAGGAGTGAGTGGGACTCAAATCCAGATGCCTTCCCCGTCCGTCCGTCCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR CCA 90 bp GGTCAGCTGTGTAATTCCTCCCTCCCACGTAGCTGGCCCAAGTGGGCTGCCAGACAGCCTCGCCGGTTATaGCACCCGCACATGCGTGTG +
Preference number: 4 (lower is better)
Translates to: GQLCNSSLPRSWPKWAARQPRRL*HPHMRV
Trigger: CACACGCATGTGCGGGTGCCATAACCGGCGAGGCTG...TCTGGCAGCCCACTTGGGCCAGCTACGTGGGAGGGAGGAATTACACAGCTGACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR CCA 90 bp GTGGGTCCCAAGCATGTGCGTGCTGACAGGGCGACTCCCAAGGTCACCATCCTCAAATGGTGGAGCGGCTaGCCCAGCCTCGCCGGTTAT +
Preference number: 4 (lower is better)
Translates to: VGPKHVRADRATPKVTILKWWSG*PSLAGY
Trigger: ATAACCGGCGAGGCTGGGCCAGCCGCTCCACCATTT...GAGGATGGTGACCTTGGGAGTCGCCCTGTCAGCACGCACATGCTTGGGACCCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR CCA 90 bp GGATGCAGCGCACTCCCCAGTAATCCCTCCGACGACGACGCAGACAGAAACCTGATGCAGTCGGGGAAATaGTGGAGCGGCTGGCCCAGC +
Preference number: 4 (lower is better)
Translates to: GCSALPSNPSDDDADRNLMQSGK*WSGWPS
Trigger: GCTGGGCCAGCCGCTCCACCATTTCCCCGACTGCAT...CAGGTTTCTGTCTGCGTCGTCGTCGGAGGGATTACTGGGGAGTGCGCTGCATCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR CCA 90 bp GGACGGATGGACGGACGGACGGACGGACGGGGAAGGCATCTGGATTTGAGTCCCAGGGAGTGTGTGGAGTaGGTCCCAAGCATGTGCGTG +
Preference number: 4 (lower is better)
Translates to: GRMDGRTDGRGRHLDLSPRECVE*VPSMCV
Trigger: CACGCACATGCTTGGGACCCACTCCACACACTCCCT...GGGACTCAAATCCAGATGCCTTCCCCGTCCGTCCGTCCGTCCGTCCATCCGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR CCA 90 bp ATGGACGGACGGACGGACGGACGGGGAAGGCATCTGGATTTGAGTCCCACTCACGACACAGGGCTTGGATaGAGGGTCTGGCGCCCAGGA +
Preference number: 4 (lower is better)
Translates to: MDGRTDGRGRHLDLSPTHDTGLG*RVWRPG
Trigger: TCCTGGGCGCCAGACCCTCCATCCAAGCCCTGTGTC...GTGAGTGGGACTCAAATCCAGATGCCTTCCCCGTCCGTCCGTCCGTCCGTCCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR CCA 90 bp GACGGACGGACGGACGGACGGGGAAGGCATCTGGATTTGAGTCCCACTCACTCCTCGAGTTTCATGGGGTaGGCGTGCAGGGACACCCAG +
Preference number: 4 (lower is better)
Translates to: DGRTDGRGRHLDLSPTHSSSFMG*ACRDTQ
Trigger: CTGGGTGTCCCTGCACGCCCACCCCATGAAACTCGA...GGAGTGAGTGGGACTCAAATCCAGATGCCTTCCCCGTCCGTCCGTCCGTCCGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR CCA 90 bp ACAGCGACTTCCGGATGCAGCGCACTCCCCAGTAATCCCTCCGACGACGACGCACCTGCTCGAGTTTCATaGGGTGGGCGTGCAGGGACA +
Preference number: 4 (lower is better)
Translates to: TATSGCSALPSNPSDDDAPARVS*GGRAGT
Trigger: TGTCCCTGCACGCCCACCCCATGAAACTCGAGCAGG...TGCGTCGTCGTCGGAGGGATTACTGGGGAGTGCGCTGCATCCGGAAGTCGCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR CCA 90 bp CCCAGTAATCCCTCCGACGACGACGCAGACAGAAACCTGGCAGTCTCCATGATCGCGCCCCGGCCCCCGTaGTCTCTTCTATGCAGGCAC +
Preference number: 4 (lower is better)
Translates to: PSNPSDDDADRNLAVSMIAPRPP*SLLCRH
Trigger: GTGCCTGCATAGAAGAGACCACGGGGGCCGGGGCGC...GATCATGGAGACTGCCAGGTTTCTGTCTGCGTCGTCGTCGGAGGGATTACTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000450764.6
CDS-3UTR CCA 90 bp GGATGGAGCAGGCCCCAGGATGCGAGACTCCAGTCAGACTCCAAAACACAAGGGCCCGGCGGATCCTCATaGGACCCAGCGAAGAGCCCT +
Preference number: 4 (lower is better)
Translates to: GWSRPQDARLQSDSKTQGPGGSS*DPAKSP
Trigger: AGGGCTCTTCGCTGGGTCCCATGAGGATCCGCCGGG...CCCTTGTGTTTTGGAGTCTGACTGGAGTCTCGCATCCTGGGGCCTGCTCCATCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450764.6
CDS-3UTR CCA 90 bp GCCAGGCCGCTGAGCAGATCCAGTGCTACGATCATGAAGTCCTTGTCGGGAGCCACCGGCTGGTTGAGGTaGTGGCCTACAGAGTCGGCC +
Preference number: 4 (lower is better)
Translates to: ARPLSRSSATIMKSLSGATGWLR*WPTESA
Trigger: GGCCGACTCTGTAGGCCACCACCTCAACCAGCCGGT...GGCTCCCGACAAGGACTTCATGATCGTAGCACTGGATCTGCTCAGCGGCCTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588491.1
CDS-3UTR TCA 90 bp GTAATCCTCCGAGTTAAGCAGGTTGCAGAGCTGGGGCAGCAGCTCGGGCCACATTCCTGCACGATGCGCTaGGTGGCTGTGTTGGGCGAC +
Preference number: 4 (lower is better)
Translates to: VILRVKQVAELGQQLGPHSCTMR*VAVLGD
Trigger: GTCGCCCAACACAGCCACTCAGCGCATCGTGCAGGA...ATGTGGCCCGAGCTGCTGCCCCAGCTCTGCAACCTGCTTAACTCGGAGGATTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586775.5
ENST00000587654.5
CDS-3UTR TCA 90 bp ACTTCCGGATGCAGCGCACTCCCCAGTAATCCCTCCGACGACGACGCAGACAGACAATGGTGGCTCGGATaGGCGAGGAGGCATCGCCAA +
Preference number: 4 (lower is better)
Translates to: TSGCSALPSNPSDDDADRQWWLG*ARRHRQ
Trigger: TTGGCGATGCCTCCTCGCTCATCCGAGCCACCATTG...TCTGTCTGCGTCGTCGTCGGAGGGATTACTGGGGAGTGCGCTGCATCCGGAAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000592287.5
CDS-3UTR TCA 90 bp GCAGCGCACTCCCCAGTAATCCCTCCGACGACGACGCAGACAGAAACCTGGCAGCAGTGTGACCGTGCGTaGCTTGTGGAAGCGTGGCTT +
Preference number: 4 (lower is better)
Translates to: AAHSPVIPPTTTQTETWQQCDRA*LVEAWL
Trigger: AAGCCACGCTTCCACAAGTCACGCACGGTCACACTG...CTGCCAGGTTTCTGTCTGCGTCGTCGTCGGAGGGATTACTGGGGAGTGCGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000592287.5
CDS-3UTR TCA 90 bp GGCACAGCGACTTCCGGATGCAGCGCACTCCCCAGTAATCCCTCCGACGACGACGTCCAGTGCAGCCGCTaGGCACTTCCTCAAATTCCA +
Preference number: 4 (lower is better)
Translates to: GTATSGCSALPSNPSDDDVQCSR*ALPQIP
Trigger: TGGAATTTGAGGAAGTGCTCAGCGGCTGCACTGGAC...GTCGTCGTCGGAGGGATTACTGGGGAGTGCGCTGCATCCGGAAGTCGCTGTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000592287.5
CDS-3UTR TCA 90 bp CGGACGGACGGACGGACGGGGAAGGCATCTGGATTTGAGTCCCACTCACTCCTCGGAAGAGGAGGCCTTTaGGTAGTGGGAGTAGGTGGG +
Preference number: 4 (lower is better)
Translates to: RTDGRTGKASGFESHSLLGRGGL*VVGVGG
Trigger: CCCACCTACTCCCACTACTCAAAGGCCTCCTCTTCC...GAGGAGTGAGTGGGACTCAAATCCAGATGCCTTCCCCGTCCGTCCGTCCGTCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR TCA 90 bp TCCGGATGCAGCGCACTCCCCAGTAATCCCTCCGACGACGACGCAGACAGAAACCTGTCATCAGGGGCTTaGGGTGCATGTCGGGTGGCT +
Preference number: 4 (lower is better)
Translates to: SGCSALPSNPSDDDADRNLSSGA*GACRVA
Trigger: AGCCACCCGACATGCACCTCAAGCCCCTGATGACAG...GTTTCTGTCTGCGTCGTCGTCGGAGGGATTACTGGGGAGTGCGCTGCATCCGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000592287.5
CDS-3UTR TCA 90 bp ACTTCCGGATGCAGCGCACTCCCCAGTAATCCCTCCGACGACGACGCAGACAGACTGTCATCAGGGGCTTaGGGTGCATGTCGGGTGGCT +
Preference number: 4 (lower is better)
Translates to: TSGCSALPSNPSDDDADRLSSGA*GACRVA
Trigger: AGCCACCCGACATGCACCTCAAGCCCCTGATGACAG...TCTGTCTGCGTCGTCGTCGGAGGGATTACTGGGGAGTGCGCTGCATCCGGAAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000592287.5
CDS-3UTR TCA 90 bp GCACTCCCCAGTAATCCCTCCGACGACGACGCAGACAGAAACCTGGCAGTCTCCTGTCCAGGATGTAGCTaGGGTAGGGCACCAGCTCCG +
Preference number: 4 (lower is better)
Translates to: ALPSNPSDDDADRNLAVSCPGCS*GRAPAP
Trigger: CGGAGCTGGTGCCCTACCTCAGCTACATCCTGGACA...GGAGACTGCCAGGTTTCTGTCTGCGTCGTCGTCGGAGGGATTACTGGGGAGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000592287.5
CDS-3UTR TCA 90 bp AGGAAGCCACTCTGCAGGGCGGTGGCCACCGATGACAGACACTCCAGCAGGGGGTGGCGTCATAGAGGATaGGCAGGTTCTTGTGCTGGT +
Preference number: 4 (lower is better)
Translates to: RKPLCRAVATDDRHSSRGWRHRG*AGSCAG
Trigger: ACCAGCACAAGAACCTGCTCATCCTCTATGACGCCA...CCCCCTGCTGGAGTGTCTGTCATCGGTGGCCACCGCCCTGCAGAGTGGCTTCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000588491.1
ENST00000589572.5
CDS-3UTR TCA 90 bp TCCAGCAGGGGGAAGAGGTCCTTGTCTTCGTCCTTGAGCTCATTCCACTTCTGGGGCGGTGGCCACCGATaGCAGACACTCCAGCAGGGG +
Preference number: 4 (lower is better)
Translates to: SSRGKRSLSSSLSSFHFWGGGHR*QTLQQG
Trigger: CCCCTGCTGGAGTGTCTGTCATCGGTGGCCACCGCC...CCAGAAGTGGAATGAGCTCAAGGACGAAGACAAGGACCTCTTCCCCCTGCTGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000588491.1
ENST00000589572.5
CDS-3UTR TCA 90 bp CTCGGCCAGGCCGCTGAGCAGATCCAGTGCTACGATCATGAAGTCCTTGTCGGGTCTTCTGCACCAGGGTaGCACAGCGCTGGTAGACGG +
Preference number: 4 (lower is better)
Translates to: LGQAAEQIQCYDHEVLVGSSAPG*HSAGRR
Trigger: CCGTCTACCAGCGCTGTGTCACCCTGGTGCAGAAGA...CCCGACAAGGACTTCATGATCGTAGCACTGGATCTGCTCAGCGGCCTGGCCGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588491.1
ENST00000589572.5
CDS-3UTR TCA 90 bp GCACTCCCCAGTAATCCCTCCGACGACGACGCAGACAGAAACCTGGCAGTCTCCTCTTCTGCACCAGGGTaGCACAGCGCTGGTAGACGG +
Preference number: 4 (lower is better)
Translates to: ALPSNPSDDDADRNLAVSSSAPG*HSAGRR
Trigger: CCGTCTACCAGCGCTGTGTCACCCTGGTGCAGAAGA...GGAGACTGCCAGGTTTCTGTCTGCGTCGTCGTCGGAGGGATTACTGGGGAGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000592287.5
CDS-3UTR TCA 90 bp CAGGGCACAGCGACTTCCGGATGCAGCGCACTCCCCAGTAATCCCTCCGACGACGTGTACATCATGGCCTaGGCCAGTGTCTTCTGCACC +
Preference number: 4 (lower is better)
Translates to: QGTATSGCSALPSNPSDDVYIMA*ASVFCT
Trigger: GGTGCAGAAGACACTGGCTCAGGCCATGATGTACAC...GTCGTCGGAGGGATTACTGGGGAGTGCGCTGCATCCGGAAGTCGCTGTGCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000592287.5
CDS-3UTR TCA 90 bp CCCAGGCCCTCGGCCAGGCCGCTGAGCAGATCCAGTGCTACGATCATGAAGTCCCCAGTGCTACGATCATaGAGTCCTTGTCGGGAGCCT +
Preference number: 4 (lower is better)
Translates to: PRPSARPLSRSSATIMKSPVLRS*SPCREP
Trigger: AGGCTCCCGACAAGGACTTCATGATCGTAGCACTGG...GGACTTCATGATCGTAGCACTGGATCTGCTCAGCGGCCTGGCCGAGGGCCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000588491.1
ENST00000589572.5
CDS-3UTR TCA 90 bp CATGCACTGGAACAGCAATGTCATGATGTTGCTGCGGGCCACCAGCTGCTCCACCCTCGGCCAGGCCGCTaGGCAGATCCAGTGCTACGA +
Preference number: 4 (lower is better)
Translates to: HALEQQCHDVAAGHQLLHPRPGR*ADPVLR
Trigger: TCGTAGCACTGGATCTGCTCAGCGGCCTGGCCGAGG...GTGGAGCAGCTGGTGGCCCGCAGCAACATCATGACATTGCTGTTCCAGTGCATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588491.1
ENST00000589572.5
CDS-3UTR TCA 90 bp CCACGTAGCTGGCCCAAGTGGGCTGCCAGAGATGACCCTATTAGAGCCCAGGGGTGCCCAGAATGGGCATaGACTCGGCGATACAGGGCT +
Preference number: 4 (lower is better)
Translates to: PRSWPKWAARDDPIRAQGCPEWA*TRRYRA
Trigger: AGCCCTGTATCGCCGAGTTCATGCCCATTCTGGGCA...CCCCTGGGCTCTAATAGGGTCATCTCTGGCAGCCCACTTGGGCCAGCTACGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR TCA 90 bp TCCGGATGCAGCGCACTCCCCAGTAATCCCTCCGACGACGACGCAGACAGAAACGATGCCGCGGAAGGCTaGGTCCTTCTCCTCGTTGTC +
Preference number: 4 (lower is better)
Translates to: SGCSALPSNPSDDDADRNDAAEG*VLLLVV
Trigger: GACAACGAGGAGAAGGACTCAGCCTTCCGCGGCATC...GTTTCTGTCTGCGTCGTCGTCGGAGGGATTACTGGGGAGTGCGCTGCATCCGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000589149.5
ENST00000592287.5
CDS-3UTR TCA 90 bp GCACTCCCCAGTAATCCCTCCGACGACGACGCAGACAGAAACCTGGCAGTCTCCGATGCCGCGGAAGGCTaGGTCCTTCTCCTCGTTGTC +
Preference number: 4 (lower is better)
Translates to: ALPSNPSDDDADRNLAVSDAAEG*VLLLVV
Trigger: GACAACGAGGAGAAGGACTCAGCCTTCCGCGGCATC...GGAGACTGCCAGGTTTCTGTCTGCGTCGTCGTCGGAGGGATTACTGGGGAGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000589149.5
ENST00000592287.5
CDS-3UTR TCA 90 bp GGACGGATGGACGGACGGACGGACGGACGGGGAAGGCATCTGGATTTGAGTCCCGAAGGCATCTGGATTTaGGTCCCACTCACTCCTCCC +
Preference number: 4 (lower is better)
Translates to: GRMDGRTDGRGRHLDLSPEGIWI*VPLTPP
Trigger: GGGAGGAGTGAGTGGGACTCAAATCCAGATGCCTTC...GGGACTCAAATCCAGATGCCTTCCCCGTCCGTCCGTCCGTCCGTCCATCCGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000589149.5
CDS-3UTR TCA 90 bp GGATGCAGCGCACTCCCCAGTAATCCCTCCGACGACGACGCAGACAGAAACCTGTCCCCGTTTGTAGGATaGGCATGGTGGCCCCACCCA +
Preference number: 4 (lower is better)
Translates to: GCSALPSNPSDDDADRNLSPFVG*AWWPHP
Trigger: TGGGTGGGGCCACCATGCTCATCCTACAAACGGGGA...CAGGTTTCTGTCTGCGTCGTCGTCGGAGGGATTACTGGGGAGTGCGCTGCATCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR TCA 90 bp ACAGCGACTTCCGGATGCAGCGCACTCCCCAGTAATCCCTCCGACGACGACGCACCATGTGTGTCCGTGTaGGTGTACGCGTCCCTACGA +
Preference number: 4 (lower is better)
Translates to: TATSGCSALPSNPSDDDAPCVSV*VYASLR
Trigger: TCGTAGGGACGCGTACACTCACACGGACACACATGG...TGCGTCGTCGTCGGAGGGATTACTGGGGAGTGCGCTGCATCCGGAAGTCGCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR TCA 90 bp TCCGGATGCAGCGCACTCCCCAGTAATCCCTCCGACGACGACGCAGACAGAAACCAAGCATGTGCGTGCTaGCAGGGCGACTCCCAAGGT +
Preference number: 4 (lower is better)
Translates to: SGCSALPSNPSDDDADRNQACAC*QGDSQG
Trigger: ACCTTGGGAGTCGCCCTGTCAGCACGCACATGCTTG...GTTTCTGTCTGCGTCGTCGTCGGAGGGATTACTGGGGAGTGCGCTGCATCCGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR TCA 90 bp CGGACGGACGGACGGACGGGGAAGGCATCTGGATTTGAGTCCCACTCACTCCTCCTGGGGCCTGAAACGTaGGAAGGGGGTTTCAGAAGC +
Preference number: 4 (lower is better)
Translates to: RTDGRTGKASGFESHSLLLGPET*EGGFRS
Trigger: GCTTCTGAAACCCCCTTCTCACGTTTCAGGCCCCAG...GAGGAGTGAGTGGGACTCAAATCCAGATGCCTTCCCCGTCCGTCCGTCCGTCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR GCA 90 bp CTGACCTGCTCCTCCCTCACCTCATCCGAAGCCGGATTCGGTCAGCTGTGTAATCCGGCCCGTTCTAGCTaGCAGGAGGATCGGGCCCAA +
Preference number: 4 (lower is better)
Translates to: LTCSSLTSSEAGFGQLCNPARSS*QEDRAQ
Trigger: TTGGGCCCGATCCTCCTGGCAGCTAGAACGGGCCGG...ATTACACAGCTGACCGAATCCGGCTTCGGATGAGGTGAGGGAGGAGCAGGTCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356861.9
CDS-3UTR GCA 90 bp ACTTCCGGATGCAGCGCACTCCCCAGTAATCCCTCCGACGACGACGCAGACAGAAGCTCGGGCCACATCTaGAGCTCACCCTTGGAAGCG +
Preference number: 4 (lower is better)
Translates to: TSGCSALPSNPSDDDADRSSGHI*SSPLEA
Trigger: CGCTTCCAAGGGTGAGCTGCAGATGTGGCCCGAGCT...TCTGTCTGCGTCGTCGTCGGAGGGATTACTGGGGAGTGCGCTGCATCCGGAAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000592287.5
CDS-3UTR GCA 90 bp CTCCCCAGTAATCCCTCCGACGACGACGCAGACAGAAACCTGGCAGTCTCCATGTCCTTGCAGATGGGCTaGTCGGCCAGCGTCAGCCAG +
Preference number: 4 (lower is better)
Translates to: LPSNPSDDDADRNLAVSMSLQMG*SASVSQ
Trigger: CTGGCTGACGCTGGCCGAGCAGCCCATCTGCAAGGA...CATGGAGACTGCCAGGTTTCTGTCTGCGTCGTCGTCGGAGGGATTACTGGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000592287.5
CDS-3UTR GCA 90 bp GGTCAGCTGTGTAATTCCTCCCTCCCACGTAGCTGGCCCAAGTGGGCTGCCAGAAGGCACTGGATCAGGTaGGGGATCAGCTCAGGCAGG +
Preference number: 4 (lower is better)
Translates to: GQLCNSSLPRSWPKWAARRHWIR*GISSGR
Trigger: CCTGCCTGAGCTGATCCCGCACCTGATCCAGTGCCT...TCTGGCAGCCCACTTGGGCCAGCTACGTGGGAGGGAGGAATTACACAGCTGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR GCA 90 bp CTGCACCAGGGTGACACAGCGCTGGTAGACGGGCTCACAGTAAGGCAGGAAGCCCAGAGTCGGCCAGGGTaGCAATGGCGTCATAGAGGA +
Preference number: 4 (lower is better)
Translates to: LHQGDTALVDGLTVRQEAQSRPG*QWRHRG
Trigger: TCCTCTATGACGCCATTGGCACCCTGGCCGACTCTG...GGCTTCCTGCCTTACTGTGAGCCCGTCTACCAGCGCTGTGTCACCCTGGTGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588491.1
ENST00000589572.5
CDS-3UTR GCA 90 bp GGTCAGCTGTGTAATTCCTCCCTCCCACGTAGCTGGCCCAAGTGGGCTGCCAGAAGGGCAAAGGAGCTCTaGCGGACCTCAGGCATCGAG +
Preference number: 4 (lower is better)
Translates to: GQLCNSSLPRSWPKWAARRAKEL*RTSGIE
Trigger: CTCGATGCCTGAGGTCCGGCAGAGCTCCTTTGCCCT...TCTGGCAGCCCACTTGGGCCAGCTACGTGGGAGGGAGGAATTACACAGCTGACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR GCA 90 bp ACGGACGGACGGACGGGGAAGGCATCTGGATTTGAGTCCCACTCACTCCTCCCTAGGGCAAAGGAGCTCTaGCGGACCTCAGGCATCGAG +
Preference number: 4 (lower is better)
Translates to: TDGRTGKASGFESHSLLPRAKEL*RTSGIE
Trigger: CTCGATGCCTGAGGTCCGGCAGAGCTCCTTTGCCCT...AGGGAGGAGTGAGTGGGACTCAAATCCAGATGCCTTCCCCGTCCGTCCGTCCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR GCA 90 bp GCCAGGCCGCTGAGCAGATCCAGTGCTACGATCATGAAGTCCTTGTCGGGAGCCAGGGCAAAGGAGCTCTaGCGGACCTCAGGCATCGAG +
Preference number: 4 (lower is better)
Translates to: ARPLSRSSATIMKSLSGARAKEL*RTSGIE
Trigger: CTCGATGCCTGAGGTCCGGCAGAGCTCCTTTGCCCT...GGCTCCCGACAAGGACTTCATGATCGTAGCACTGGATCTGCTCAGCGGCCTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588491.1
ENST00000589572.5
CDS-3UTR GCA 90 bp GACGGACGGACGGGGAAGGCATCTGGATTTGAGTCCCACTCACTCCTCCCTAACGGCCGGATGAACTGCTaGAGCATGGGTGCCACCTCC +
Preference number: 4 (lower is better)
Translates to: DGRTGKASGFESHSLLPNGRMNC*SMGATS
Trigger: GGAGGTGGCACCCATGCTGCAGCAGTTCATCCGGCC...GTTAGGGAGGAGTGAGTGGGACTCAAATCCAGATGCCTTCCCCGTCCGTCCGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000589149.5
CDS-3UTR GCA 90 bp CAGGGCACAGCGACTTCCGGATGCAGCGCACTCCCCAGTAATCCCTCCGACGACCGATCATCATGCAGATaGCGCGGAAGGCTGAGTCCT +
Preference number: 4 (lower is better)
Translates to: QGTATSGCSALPSNPSDDRSSCR*RGRLSP
Trigger: AGGACTCAGCCTTCCGCGGCATCTGCATGATGATCG...GTCGTCGGAGGGATTACTGGGGAGTGCGCTGCATCCGGAAGTCGCTGTGCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000589149.5
ENST00000592287.5
CDS-3UTR GCA 90 bp GGCACAGCGACTTCCGGATGCAGCGCACTCCCCAGTAATCCCTCCGACGACGACCGATCATCATGCAGATaGCGCGGAAGGCTGAGTCCT +
Preference number: 4 (lower is better)
Translates to: GTATSGCSALPSNPSDDDRSSCR*RGRLSP
Trigger: AGGACTCAGCCTTCCGCGGCATCTGCATGATGATCG...GTCGTCGTCGGAGGGATTACTGGGGAGTGCGCTGCATCCGGAAGTCGCTGTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000589149.5
ENST00000592287.5
CDS-3UTR GCA 90 bp CTGCCAGGAGGGCAAGTGGACGGATGGACGGACGGACGGACGGACGGGGAAGGCTGCTCAGAGAACTGCTaGCAGTTATCTTCCCCAACT +
Preference number: 4 (lower is better)
Translates to: LPGGQVDGWTDGRTDGEGCSENC*QLSSPT
Trigger: AGTTGGGGAAGATAACTGGCAGCAGTTCTCTGAGCA...GCCTTCCCCGTCCGTCCGTCCGTCCGTCCATCCGTCCACTTGCCCTCCTGGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000589149.5
CDS-3UTR GCA 90 bp AGGGCACAGCGACTTCCGGATGCAGCGCACTCCCCAGTAATCCCTCCGACGACGACAGCGACTTCCGGATaGAGCGCACTCCCCAGTAAT +
Preference number: 4 (lower is better)
Translates to: RAQRLPDAAHSPVIPPTTTATSG*SALPSN
Trigger: ATTACTGGGGAGTGCGCTGCATCCGGAAGTCGCTGT...CGTCGTCGGAGGGATTACTGGGGAGTGCGCTGCATCCGGAAGTCGCTGTGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000589149.5
ENST00000592287.5
CDS-3UTR GCA 90 bp GCACTCCCCAGTAATCCCTCCGACGACGACGCAGACAGAAACCTGGCAGTCTCCGAGCAGGCCCCAGGATaGGAGACTCCAGTCAGACTC +
Preference number: 4 (lower is better)
Translates to: ALPSNPSDDDADRNLAVSEQAPG*ETPVRL
Trigger: GAGTCTGACTGGAGTCTCGCATCCTGGGGCCTGCTC...GGAGACTGCCAGGTTTCTGTCTGCGTCGTCGTCGGAGGGATTACTGGGGAGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR GCA 90 bp AATGGTGGAGCGGCTGGCCCAGCCTCGCCGGTTATGGCACCCGCACATGCGTGTATCCCAGAGGCCTCCTaGCCTAGTCCAATTTCTGAG +
Preference number: 4 (lower is better)
Translates to: NGGAAGPASPVMAPAHACIPEAS*PSPISE
Trigger: CTCAGAAATTGGACTAGGGCAGGAGGCCTCTGGGAT...ACACGCATGTGCGGGTGCCATAACCGGCGAGGCTGGGCCAGCCGCTCCACCATT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450764.6
CDS-3UTR CCA 90 bp GACGGACGGGGAAGGCATCTGGATTTGAGTCCCACTCACTCCTCCCTAACCCCCGCACGATGCGCTGAGTaGCTGTGTTGGGCGACTGTG +
Preference number: 4 (lower is better)
Translates to: DGRGRHLDLSPTHSSLTPARCAE*LCWATV
Trigger: CACAGTCGCCCAACACAGCCACTCAGCGCATCGTGC...GGGGGTTAGGGAGGAGTGAGTGGGACTCAAATCCAGATGCCTTCCCCGTCCGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR CCA 90 bp GCACTCCCCAGTAATCCCTCCGACGACGACGCAGACAGAAACCTGGCAGTCTCCGCACGATGCGCTGAGTaGCTGTGTTGGGCGACTGTG +
Preference number: 4 (lower is better)
Translates to: ALPSNPSDDDADRNLAVSARCAE*LCWATV
Trigger: CACAGTCGCCCAACACAGCCACTCAGCGCATCGTGC...GGAGACTGCCAGGTTTCTGTCTGCGTCGTCGTCGGAGGGATTACTGGGGAGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000592287.5
CDS-3UTR CCA 90 bp CTCCCCAGTAATCCCTCCGACGACGACGCAGACAGAAACCTGGCAGTCTCCATGGGTTCACGCAGGCGATaGCGTGGGACCGGATCTTGG +
Preference number: 4 (lower is better)
Translates to: LPSNPSDDDADRNLAVSMGSRRR*RGTGSW
Trigger: CCAAGATCCGGTCCCACGCCATCGCCTGCGTGAACC...CATGGAGACTGCCAGGTTTCTGTCTGCGTCGTCGTCGGAGGGATTACTGGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000592287.5
CDS-3UTR CCA 90 bp CACTCCCCAGTAATCCCTCCGACGACGACGCAGACAGAAACCTGGCAGTCTCCAGGTTCACGCAGGCGATaGCGTGGGACCGGATCTTGG +
Preference number: 4 (lower is better)
Translates to: HSPVIPPTTTQTETWQSPGSRRR*RGTGSW
Trigger: CCAAGATCCGGTCCCACGCCATCGCCTGCGTGAACC...TGGAGACTGCCAGGTTTCTGTCTGCGTCGTCGTCGGAGGGATTACTGGGGAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000592287.5
CDS-3UTR CCA 90 bp GTGGGTCCCAAGCATGTGCGTGCTGACAGGGCGACTCCCAAGGTCACCATCCTCTTGTCCATCAGCGCCTaGGCCCGGTCCATGATGAAC +
Preference number: 4 (lower is better)
Translates to: VGPKHVRADRATPKVTILLSISA*ARSMMN
Trigger: GTTCATCATGGACCGGGCCCAGGCGCTGATGGACAA...GAGGATGGTGACCTTGGGAGTCGCCCTGTCAGCACGCACATGCTTGGGACCCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR CCA 90 bp CAGGGCACAGCGACTTCCGGATGCAGCGCACTCCCCAGTAATCCCTCCGACGACGCAACGTTCTCATCATaGTCCTGGGTCCTCTGCAGC +
Preference number: 4 (lower is better)
Translates to: QGTATSGCSALPSNPSDDATFSS*SWVLCS
Trigger: GCTGCAGAGGACCCAGGACCATGATGAGAACGTTGC...GTCGTCGGAGGGATTACTGGGGAGTGCGCTGCATCCGGAAGTCGCTGTGCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000592287.5
CDS-3UTR CCA 90 bp TGCAGCGCACTCCCCAGTAATCCCTCCGACGACGACGCAGACAGAAACCTGGCAGGACTTCCTTGCAGATaGGCTGCTCGGCCAGCGTCA +
Preference number: 4 (lower is better)
Translates to: CSALPSNPSDDDADRNLAGLPCR*AARPAS
Trigger: TGACGCTGGCCGAGCAGCCCATCTGCAAGGAAGTCC...TGCCAGGTTTCTGTCTGCGTCGTCGTCGGAGGGATTACTGGGGAGTGCGCTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000592287.5
CDS-3UTR CCA 90 bp CAGGGCACAGCGACTTCCGGATGCAGCGCACTCCCCAGTAATCCCTCCGACGACACCGTGCGTGACTTGTaGAAGCGTGGCTTGATGTCC +
Preference number: 4 (lower is better)
Translates to: QGTATSGCSALPSNPSDDTVRDL*KRGLMS
Trigger: GGACATCAAGCCACGCTTCCACAAGTCACGCACGGT...GTCGTCGGAGGGATTACTGGGGAGTGCGCTGCATCCGGAAGTCGCTGTGCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000592287.5
CDS-3UTR CCA 90 bp TCCGGATGCAGCGCACTCCCCAGTAATCCCTCCGACGACGACGCAGACAGAAACCCTCCCGGAAGACATTaGCGAGGACGTCCAGTGCAG +
Preference number: 4 (lower is better)
Translates to: SGCSALPSNPSDDDADRNPPGRH*RGRPVQ
Trigger: CTGCACTGGACGTCCTCGCCAATGTCTTCCGGGAGG...GTTTCTGTCTGCGTCGTCGTCGGAGGGATTACTGGGGAGTGCGCTGCATCCGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000592287.5
CDS-3UTR CCA 90 bp CACTCCCCAGTAATCCCTCCGACGACGACGCAGACAGAAACCTGGCAGTCTCCATGCAGCCCTCAGCAATaGCGCCCAGCACCAGGATGC +
Preference number: 4 (lower is better)
Translates to: HSPVIPPTTTQTETWQSPCSPQQ*RPAPGC
Trigger: GCATCCTGGTGCTGGGCGCCATTGCTGAGGGCTGCA...TGGAGACTGCCAGGTTTCTGTCTGCGTCGTCGTCGGAGGGATTACTGGGGAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000592287.5
CDS-3UTR CCA 90 bp CTCCCCAGTAATCCCTCCGACGACGACGCAGACAGAAACCTGGCAGTCTCCATGGCGTCCAGCAGGCGATaGAGCGGACCAAGGCCTTCT +
Preference number: 4 (lower is better)
Translates to: LPSNPSDDDADRNLAVSMASSRR*SGPRPS
Trigger: AGAAGGCCTTGGTCCGCTCCATCGCCTGCTGGACGC...CATGGAGACTGCCAGGTTTCTGTCTGCGTCGTCGTCGGAGGGATTACTGGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000592287.5
CDS-3UTR CCA 90 bp GGCACAGCGACTTCCGGATGCAGCGCACTCCCCAGTAATCCCTCCGACGACGACGGGGGCATCAGCTTCTaGATGTATTCCGGCTGGTTG +
Preference number: 4 (lower is better)
Translates to: GTATSGCSALPSNPSDDDGGISF*MYSGWL
Trigger: CAACCAGCCGGAATACATCCAGAAGCTGATGCCCCC...GTCGTCGTCGGAGGGATTACTGGGGAGTGCGCTGCATCCGGAAGTCGCTGTGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000592287.5
CDS-3UTR CCA 90 bp CCACTCTGCAGGGCGGTGGCCACCGATGACAGACACTCCAGCAGGGGGAAGAGGAGCTCATTCCACTTCTaGATCAGTGGGGGCATCAGC +
Preference number: 4 (lower is better)
Translates to: PLCRAVATDDRHSSRGKRSSFHF*ISGGIS
Trigger: GCTGATGCCCCCACTGATCCAGAAGTGGAATGAGCT...CCTCTTCCCCCTGCTGGAGTGTCTGTCATCGGTGGCCACCGCCCTGCAGAGTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000588491.1
ENST00000589572.5
CDS-3UTR CCA 90 bp GGAAGCCACTCTGCAGGGCGGTGGCCACCGATGACAGACACTCCAGCAGGGGGAGCTGGGTGTACATCATaGCCTGAGCCAGTGTCTTCT +
Preference number: 4 (lower is better)
Translates to: GSHSAGRWPPMTDTPAGGAGCTS*PEPVSS
Trigger: AGAAGACACTGGCTCAGGCCATGATGTACACCCAGC...TCCCCCTGCTGGAGTGTCTGTCATCGGTGGCCACCGCCCTGCAGAGTGGCTTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000588491.1
ENST00000589572.5
CDS-3UTR CCA 90 bp CAGGGCACAGCGACTTCCGGATGCAGCGCACTCCCCAGTAATCCCTCCGACGACGACGGAGATGAACTCTaGGTTCAGGTTGGTGCCCAG +
Preference number: 4 (lower is better)
Translates to: QGTATSGCSALPSNPSDDDGDEL*VQVGAQ
Trigger: CTGGGCACCAACCTGAACCCAGAGTTCATCTCCGTC...GTCGTCGGAGGGATTACTGGGGAGTGCGCTGCATCCGGAAGTCGCTGTGCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000592287.5
CDS-3UTR CCA 90 bp GACGGACGGGGAAGGCATCTGGATTTGAGTCCCACTCACTCCTCCCTAACCCCCAAATGGTGGAGCGGCTaGCCCAGCCTCGCCGGTTAT +
Preference number: 4 (lower is better)
Translates to: DGRGRHLDLSPTHSSLTPKWWSG*PSLAGY
Trigger: ATAACCGGCGAGGCTGGGCCAGCCGCTCCACCATTT...GGGGGTTAGGGAGGAGTGAGTGGGACTCAAATCCAGATGCCTTCCCCGTCCGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR CCA 90 bp ACTTCCGGATGCAGCGCACTCCCCAGTAATCCCTCCGACGACGACGCAGACAGACTTGGATGGAGGGTCTaGCGCCCAGGAGGGATGGAT +
Preference number: 4 (lower is better)
Translates to: TSGCSALPSNPSDDDADRLGWRV*RPGGMD
Trigger: ATCCATCCCTCCTGGGCGCCAGACCCTCCATCCAAG...TCTGTCTGCGTCGTCGTCGGAGGGATTACTGGGGAGTGCGCTGCATCCGGAAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR CCA 90 bp AAGCCACTCTGCAGGGCGGTGGCCACCGATGACAGACACTCCAGCAGGGGGAAGGGGGGCATCAGCTTCTaGATGTATTCCTGGAGAGGG +
Preference number: 4 (lower is better)
Translates to: KPLCRAVATDDRHSSRGKGGISF*MYSWRG
Trigger: CCCTCTCCAGGAATACATCCAGAAGCTGATGCCCCC...CTTCCCCCTGCTGGAGTGTCTGTCATCGGTGGCCACCGCCCTGCAGAGTGGCTT
61% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000588491.1
CDS-3UTR TCA 90 bp CAGGAACTTGGGGATCATGATGTTGAGGGGCCTGTTGAGGGCGTCACTGTCCAGCACTGGCCCTCTTCTTaGGGAGCCCCGACATGGCCT +
Preference number: 4 (lower is better)
Translates to: QELGDHDVEGPVEGVTVQHWPSS*GAPTWP
Trigger: AGGCCATGTCGGGGCTCCTCAAGAAGAGGGCCAGTG...CTGGACAGTGACGCCCTCAACAGGCCCCTCAACATCATGATCCCCAAGTTCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000586775.5
CDS-3UTR TCA 90 bp GGATGCAGCGCACTCCCCAGTAATCCCTCCGACGACGACGCAGACAGAAACCTGGCGACTGTGAGTCTTTaGGCAGCTGCAGGACCTGCT +
Preference number: 4 (lower is better)
Translates to: GCSALPSNPSDDDADRNLATVSL*AAAGPA
Trigger: AGCAGGTCCTGCAGCTGCTCAAAGACTCACAGTCGC...CAGGTTTCTGTCTGCGTCGTCGTCGGAGGGATTACTGGGGAGTGCGCTGCATCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000592287.5
CDS-3UTR TCA 90 bp CCACGTAGCTGGCCCAAGTGGGCTGCCAGAGATGACCCTATTAGAGCCCAGGGGTGTGTTGGGCGACTGTaGGTCTTTGAGCAGCTGCAG +
Preference number: 4 (lower is better)
Translates to: PRSWPKWAARDDPIRAQGCVGRL*VFEQLQ
Trigger: CTGCAGCTGCTCAAAGACTCACAGTCGCCCAACACA...CCCCTGGGCTCTAATAGGGTCATCTCTGGCAGCCCACTTGGGCCAGCTACGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR TCA 90 bp TCCTCCGAGTTAAGCAGGTTGCAGAGCTGGGGCAGCAGCTCGGGCCACATCTGCTGTGTTGGGCGACTGTaGGTCTTTGAGCAGCTGCAG +
Preference number: 4 (lower is better)
Translates to: SSELSRLQSWGSSSGHICCVGRL*VFEQLQ
Trigger: CTGCAGCTGCTCAAAGACTCACAGTCGCCCAACACA...GCAGATGTGGCCCGAGCTGCTGCCCCAGCTCTGCAACCTGCTTAACTCGGAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586775.5
ENST00000587654.5
CDS-3UTR TCA 90 bp CCCAGTAATCCCTCCGACGACGACGCAGACAGAAACCTGGCAGTCTCCATGATCTCCTGCACGATGCGCTaGGTGGCTGTGTTGGGCGAC +
Preference number: 4 (lower is better)
Translates to: PSNPSDDDADRNLAVSMISCTMR*VAVLGD
Trigger: GTCGCCCAACACAGCCACTCAGCGCATCGTGCAGGA...GATCATGGAGACTGCCAGGTTTCTGTCTGCGTCGTCGTCGGAGGGATTACTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000592287.5
CDS-3UTR TCA 90 bp GGATGGAGCAGGCCCCAGGATGCGAGACTCCAGTCAGACTCCAAAACACAAGGGCAATGGTGGCTCGGATaGGCGAGGAGGCATCGCCAA +
Preference number: 4 (lower is better)
Translates to: GWSRPQDARLQSDSKTQGQWWLG*ARRHRQ
Trigger: TTGGCGATGCCTCCTCGCTCATCCGAGCCACCATTG...CCCTTGTGTTTTGGAGTCTGACTGGAGTCTCGCATCCTGGGGCCTGCTCCATCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR TCA 90 bp ATGATGAACTGGTTCACGCAGGCGATGGCGTGGGACCGGATCTTGGGACTGCAGCAATGGTGGCTCGGATaGGCGAGGAGGCATCGCCAA +
Preference number: 4 (lower is better)
Translates to: MMNWFTQAMAWDRILGLQQWWLG*ARRHRQ
Trigger: TTGGCGATGCCTCCTCGCTCATCCGAGCCACCATTG...CTGCAGTCCCAAGATCCGGTCCCACGCCATCGCCTGCGTGAACCAGTTCATCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586775.5
CDS-3UTR TCA 90 bp CGGACGGACGGACGGACGGGGAAGGCATCTGGATTTGAGTCCCACTCACTCCTCTGTGCATGTGGGGGATaGGCCTGTCAATCCGCACTT +
Preference number: 4 (lower is better)
Translates to: RTDGRTGKASGFESHSLLCACGG*ACQSAL
Trigger: AAGTGCGGATTGACAGGCTCATCCCCCACATGCACA...GAGGAGTGAGTGGGACTCAAATCCAGATGCCTTCCCCGTCCGTCCGTCCGTCCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR TCA 90 bp GCAGCGCACTCCCCAGTAATCCCTCCGACGACGACGCAGACAGAAACCTGGCAGTGTGCATGTGGGGGATaGGCCTGTCAATCCGCACTT +
Preference number: 4 (lower is better)
Translates to: AAHSPVIPPTTTQTETWQCACGG*ACQSAL
Trigger: AAGTGCGGATTGACAGGCTCATCCCCCACATGCACA...CTGCCAGGTTTCTGTCTGCGTCGTCGTCGGAGGGATTACTGGGGAGTGCGCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000592287.5
CDS-3UTR TCA 90 bp GCAGCGCACTCCCCAGTAATCCCTCCGACGACGACGCAGACAGAAACCTGGCAGGCAGCATGTACTGGATaGTGCTGTGCATGTGGGGGA +
Preference number: 4 (lower is better)
Translates to: AAHSPVIPPTTTQTETWQAACTG*CCACGG
Trigger: TCCCCCACATGCACAGCATCATCCAGTACATGCTGC...CTGCCAGGTTTCTGTCTGCGTCGTCGTCGGAGGGATTACTGGGGAGTGCGCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000592287.5
CDS-3UTR TCA 90 bp GACGGACGGGGAAGGCATCTGGATTTGAGTCCCACTCACTCCTCCCTAACCCCCTGTGGAAGCGTGGCTTaGTGTCCTGCTCACTGTCGG +
Preference number: 4 (lower is better)
Translates to: DGRGRHLDLSPTHSSLTPCGSVA*CPAHCR
Trigger: CCGACAGTGAGCAGGACATCAAGCCACGCTTCCACA...GGGGGTTAGGGAGGAGTGAGTGGGACTCAAATCCAGATGCCTTCCCCGTCCGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR TCA 90 bp GCACTCCCCAGTAATCCCTCCGACGACGACGCAGACAGAAACCTGGCAGTCTCCTGTGGAAGCGTGGCTTaGTGTCCTGCTCACTGTCGG +
Preference number: 4 (lower is better)
Translates to: ALPSNPSDDDADRNLAVSCGSVA*CPAHCR
Trigger: CCGACAGTGAGCAGGACATCAAGCCACGCTTCCACA...GGAGACTGCCAGGTTTCTGTCTGCGTCGTCGTCGGAGGGATTACTGGGGAGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000592287.5
CDS-3UTR TCA 90 bp CTGACCTGCTCCTCCCTCACCTCATCCGAAGCCGGATTCGGTCAGCTGTGTAATCCTCGTGGGGCAGTGTaGCCGTGCGTGACTTGTGGA +
Preference number: 4 (lower is better)
Translates to: LTCSSLTSSEAGFGQLCNPRGAV*PCVTCG
Trigger: TCCACAAGTCACGCACGGTCACACTGCCCCACGAGG...ATTACACAGCTGACCGAATCCGGCTTCGGATGAGGTGAGGGAGGAGCAGGTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR TCA 90 bp TGCAGCGCACTCCCCAGTAATCCCTCCGACGACGACGCAGACAGAAACCTGGCAGGAAGAGGAGGCCTTTaGGTAGTGGGAGTAGGTGGG +
Preference number: 4 (lower is better)
Translates to: CSALPSNPSDDDADRNLAGRGGL*VVGVGG
Trigger: CCCACCTACTCCCACTACTCAAAGGCCTCCTCTTCC...TGCCAGGTTTCTGTCTGCGTCGTCGTCGGAGGGATTACTGGGGAGTGCGCTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000592287.5
CDS-3UTR TCA 90 bp GGCACAGCGACTTCCGGATGCAGCGCACTCCCCAGTAATCCCTCCGACGACGACTGGCGTCATAGAGGATaGGCAGGTTCTTGTGCTGGT +
Preference number: 4 (lower is better)
Translates to: GTATSGCSALPSNPSDDDWRHRG*AGSCAG
Trigger: ACCAGCACAAGAACCTGCTCATCCTCTATGACGCCA...GTCGTCGTCGGAGGGATTACTGGGGAGTGCGCTGCATCCGGAAGTCGCTGTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000592287.5
CDS-3UTR TCA 90 bp GGTGACCTCTGGCCAGCCCCAGCCACTCCAGTGGTTCTCACCCTGCGAGCTAGGCCTTGTCTTCGTCCTTaGGCTCATTCCACTTCTGGA +
Preference number: 4 (lower is better)
Translates to: GDLWPAPATPVVLTLRARPCLRP*AHSTSG
Trigger: TCCAGAAGTGGAATGAGCTCAAGGACGAAGACAAGG...CCTAGCTCGCAGGGTGAGAACCACTGGAGTGGCTGGGGCTGGCCAGAGGTCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR TCA 90 bp ACTATGATGAGCAGGAAGTCCCAGGGAGATGGAATAGGGAACAGGGGACACACCGGCGGTGGCCACCGATaGCAGACACTCCAGCAGGGG +
Preference number: 4 (lower is better)
Translates to: TMMSRKSQGDGIGNRGHTGGGHR*QTLQQG
Trigger: CCCCTGCTGGAGTGTCTGTCATCGGTGGCCACCGCC...GGTGTGTCCCCTGTTCCCTATTCCATCTCCCTGGGACTTCCTGCTCATCATAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR TCA 90 bp CTCCCCAGTAATCCCTCCGACGACGACGCAGACAGAAACCTGGCAGTCTCCATGTCTTCTGCACCAGGGTaGCACAGCGCTGGTAGACGG +
Preference number: 4 (lower is better)
Translates to: LPSNPSDDDADRNLAVSMSSAPG*HSAGRR
Trigger: CCGTCTACCAGCGCTGTGTCACCCTGGTGCAGAAGA...CATGGAGACTGCCAGGTTTCTGTCTGCGTCGTCGTCGGAGGGATTACTGGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000592287.5
CDS-3UTR TCA 90 bp GACGGACGGACGGGGAAGGCATCTGGATTTGAGTCCCACTCACTCCTCCCTAACTCTTCTGCACCAGGGTaGCACAGCGCTGGTAGACGG +
Preference number: 4 (lower is better)
Translates to: DGRTGKASGFESHSLLPNSSAPG*HSAGRR
Trigger: CCGTCTACCAGCGCTGTGTCACCCTGGTGCAGAAGA...GTTAGGGAGGAGTGAGTGGGACTCAAATCCAGATGCCTTCCCCGTCCGTCCGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR TCA 90 bp CTGCACCAGGGTGACACAGCGCTGGTAGACGGGCTCACAGTAAGGCAGGAAGCCCCAGTGCTACGATCATaGAGTCCTTGTCGGGAGCCT +
Preference number: 4 (lower is better)
Translates to: LHQGDTALVDGLTVRQEAPVLRS*SPCREP
Trigger: AGGCTCCCGACAAGGACTTCATGATCGTAGCACTGG...GGCTTCCTGCCTTACTGTGAGCCCGTCTACCAGCGCTGTGTCACCCTGGTGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000588491.1
ENST00000589572.5
CDS-3UTR TCA 90 bp ACAGCGACTTCCGGATGCAGCGCACTCCCCAGTAATCCCTCCGACGACGACGCACCAGTGCTACGATCATaGAGTCCTTGTCGGGAGCCT +
Preference number: 4 (lower is better)
Translates to: TATSGCSALPSNPSDDDAPVLRS*SPCREP
Trigger: AGGCTCCCGACAAGGACTTCATGATCGTAGCACTGG...TGCGTCGTCGTCGGAGGGATTACTGGGGAGTGCGCTGCATCCGGAAGTCGCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000592287.5
CDS-3UTR TCA 90 bp ACAGCGACTTCCGGATGCAGCGCACTCCCCAGTAATCCCTCCGACGACGACGCAGGAACAGCAATGTCATaGTGTTGCTGCGGGCCACCA +
Preference number: 4 (lower is better)
Translates to: TATSGCSALPSNPSDDDAGTAMS*CCCGPP
Trigger: TGGTGGCCCGCAGCAACATCATGACATTGCTGTTCC...TGCGTCGTCGTCGGAGGGATTACTGGGGAGTGCGCTGCATCCGGAAGTCGCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000592287.5
CDS-3UTR TCA 90 bp GCACTCCCCAGTAATCCCTCCGACGACGACGCAGACAGAAACCTGGCAGTCTCCCCAAGCGGCCGATGGTaGTGGCTGTGTTTTCCAGCA +
Preference number: 4 (lower is better)
Translates to: ALPSNPSDDDADRNLAVSPSGRW*WLCFPA
Trigger: TGCTGGAAAACACAGCCATCACCATCGGCCGCTTGG...GGAGACTGCCAGGTTTCTGTCTGCGTCGTCGTCGGAGGGATTACTGGGGAGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000589149.5
CDS-3UTR TCA 90 bp AGGCCGCTGAGCAGATCCAGTGCTACGATCATGAAGTCCTTGTCGGGAGCCTCACGGGGTGGCAGACTGTaGCTCAGGTACCGGCTGGTT +
Preference number: 4 (lower is better)
Translates to: RPLSRSSATIMKSLSGASRGGRL*LRYRLV
Trigger: AACCAGCCGGTACCTGAGTCACAGTCTGCCACCCCG...TGAGGCTCCCGACAAGGACTTCATGATCGTAGCACTGGATCTGCTCAGCGGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588491.1
CDS-3UTR GCA 90 bp TTGAGGGGCCTGTTGAGGGCGTCACTGTCCAGAAGCTCTGATGAGTCTTCACAGACCTGCTGCAGGCCCTaGTCGTCTGGCTGCCAGTCC +
Preference number: 4 (lower is better)
Translates to: LRGLLRASLSRSSDESSQTCCRP*SSGCQS
Trigger: GGACTGGCAGCCAGACGAGCAGGGCCTGCAGCAGGT...CTGTGAAGACTCATCAGAGCTTCTGGACAGTGACGCCCTCAACAGGCCCCTCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586775.5
ENST00000587654.5
CDS-3UTR GCA 90 bp CAGGGCACAGCGACTTCCGGATGCAGCGCACTCCCCAGTAATCCCTCCGACGACGTTTATCCTGCACGATaGGCTGAGTGGCTGTGTTGG +
Preference number: 4 (lower is better)
Translates to: QGTATSGCSALPSNPSDDVYPAR*AEWLCW
Trigger: CCAACACAGCCACTCAGCGCATCGTGCAGGATAAAC...GTCGTCGGAGGGATTACTGGGGAGTGCGCTGCATCCGGAAGTCGCTGTGCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000592287.5
CDS-3UTR GCA 90 bp CAGGGCACAGCGACTTCCGGATGCAGCGCACTCCCCAGTAATCCCTCCGACGACCTGTTTGATGAAGTCTaGCACAGGGGGTGGGAAGCT +
Preference number: 4 (lower is better)
Translates to: QGTATSGCSALPSNPSDDLFDEV*HRGWEA
Trigger: AGCTTCCCACCCCCTGTGGCAGACTTCATCAAACAG...GTCGTCGGAGGGATTACTGGGGAGTGCGCTGCATCCGGAAGTCGCTGTGCCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000592287.5
CDS-3UTR GCA 90 bp CCCAGTAATCCCTCCGACGACGACGCAGACAGAAACCTGGCAGTCTCCATGATCTCCTTGCAGATGGGCTaGTCGGCCAGCGTCAGCCAG +
Preference number: 4 (lower is better)
Translates to: PSNPSDDDADRNLAVSMISLQMG*SASVSQ
Trigger: CTGGCTGACGCTGGCCGAGCAGCCCATCTGCAAGGA...GATCATGGAGACTGCCAGGTTTCTGTCTGCGTCGTCGTCGGAGGGATTACTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000592287.5
CDS-3UTR GCA 90 bp GGATGGAGCAGGCCCCAGGATGCGAGACTCCAGTCAGACTCCAAAACACAAGGGCGTGGCTTGATGTCCTaGTCACTGTCGGGGACAGCC +
Preference number: 4 (lower is better)
Translates to: GWSRPQDARLQSDSKTQGRGLMS*SLSGTA
Trigger: GGCTGTCCCCGACAGTGAGCAGGACATCAAGCCACG...CCCTTGTGTTTTGGAGTCTGACTGGAGTCTCGCATCCTGGGGCCTGCTCCATCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR GCA 90 bp GGATGGAGCAGGCCCCAGGATGCGAGACTCCAGTCAGACTCCAAAACACAAGGGAGGCACTGGATCAGGTaGGGGATCAGCTCAGGCAGG +
Preference number: 4 (lower is better)
Translates to: GWSRPQDARLQSDSKTQGRHWIR*GISSGR
Trigger: CCTGCCTGAGCTGATCCCGCACCTGATCCAGTGCCT...CCCTTGTGTTTTGGAGTCTGACTGGAGTCTCGCATCCTGGGGCCTGCTCCATCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR GCA 90 bp CACTCCCCAGTAATCCCTCCGACGACGACGCAGACAGAAACCTGGCAGTCTCCAAGGCACTGGATCAGGTaGGGGATCAGCTCAGGCAGG +
Preference number: 4 (lower is better)
Translates to: HSPVIPPTTTQTETWQSPRHWIR*GISSGR
Trigger: CCTGCCTGAGCTGATCCCGCACCTGATCCAGTGCCT...TGGAGACTGCCAGGTTTCTGTCTGCGTCGTCGTCGGAGGGATTACTGGGGAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000592287.5
CDS-3UTR GCA 90 bp AGGATCTCTGGGCTCACTGGGTACTATGATGAGCAGGAAGTCCCAGGGAGATGGAGGGCACCAGCTCCGTaGAGGCCTCTTCCTCCAGGG +
Preference number: 4 (lower is better)
Translates to: RISGLTGYYDEQEVPGRWRAPAP*RPLPPG
Trigger: CCCTGGAGGAAGAGGCCTGCACGGAGCTGGTGCCCT...CCATCTCCCTGGGACTTCCTGCTCATCATAGTACCCAGTGAGCCCAGAGATCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR GCA 90 bp CAGACACTCCAGCAGGGGGAAGAGGTCCTTGTCTTCGTCCTTGAGCTCATTCCAGGCAGGAAGCCACTCTaGAGGGCGGTGGCCACCGAT +
Preference number: 4 (lower is better)
Translates to: QTLQQGEEVLVFVLELIPGRKPL*RAVATD
Trigger: ATCGGTGGCCACCGCCCTGCAGAGTGGCTTCCTGCC...TGGAATGAGCTCAAGGACGAAGACAAGGACCTCTTCCCCCTGCTGGAGTGTCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000588491.1
ENST00000589572.5
CDS-3UTR GCA 90 bp CCCAGGCCCTCGGCCAGGCCGCTGAGCAGATCCAGTGCTACGATCATGAAGTCCTCATACTGCTCAGGGTaGTGGGTGTACATCATGGCC +
Preference number: 4 (lower is better)
Translates to: PRPSARPLSRSSATIMKSSYCSG*WVYIMA
Trigger: GGCCATGATGTACACCCAGCACCCTGAGCAGTATGA...GGACTTCATGATCGTAGCACTGGATCTGCTCAGCGGCCTGGCCGAGGGCCTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588491.1
ENST00000589572.5
CDS-3UTR GCA 90 bp ACTTCCGGATGCAGCGCACTCCCCAGTAATCCCTCCGACGACGACGCAGACAGATCGGGAGCCTCATACTaGTCAGGGTGCTGGGTGTAC +
Preference number: 4 (lower is better)
Translates to: TSGCSALPSNPSDDDADRSGASY*SGCWVY
Trigger: GTACACCCAGCACCCTGAGCAGTATGAGGCTCCCGA...TCTGTCTGCGTCGTCGTCGGAGGGATTACTGGGGAGTGCGCTGCATCCGGAAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000592287.5
CDS-3UTR GCA 90 bp GGCAGGAAGCCACTCTGCAGGGCGGTGGCCACCGATGACAGACACTCCAGCAGGGCATCGAGTCCTGCATaGACTGGAACAGCAATGTCA +
Preference number: 4 (lower is better)
Translates to: GRKPLCRAVATDDRHSSRASSPA*TGTAMS
Trigger: TGACATTGCTGTTCCAGTGCATGCAGGACTCGATGC...CCTGCTGGAGTGTCTGTCATCGGTGGCCACCGCCCTGCAGAGTGGCTTCCTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588491.1
ENST00000589572.5
CDS-3UTR GCA 90 bp GACGGACGGACGGACGGACGGGGAAGGCATCTGGATTTGAGTCCCACTCACTCCCTGCCCCCATCTGCATaGAGATTTCACCAATGGCCC +
Preference number: 4 (lower is better)
Translates to: DGRTDGRGRHLDLSPTHSLPPSA*RFHQWP
Trigger: GGGCCATTGGTGAAATCTGCATGCAGATGGGGGCAG...GGAGTGAGTGGGACTCAAATCCAGATGCCTTCCCCGTCCGTCCGTCCGTCCGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR GCA 90 bp ACAGCGACTTCCGGATGCAGCGCACTCCCCAGTAATCCCTCCGACGACGACGCACTGCCCCCATCTGCATaGAGATTTCACCAATGGCCC +
Preference number: 4 (lower is better)
Translates to: TATSGCSALPSNPSDDDALPPSA*RFHQWP
Trigger: GGGCCATTGGTGAAATCTGCATGCAGATGGGGGCAG...TGCGTCGTCGTCGGAGGGATTACTGGGGAGTGCGCTGCATCCGGAAGTCGCTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000592287.5
CDS-3UTR GCA 90 bp CGGACGGACGGACGGACGGGGAAGGCATCTGGATTTGAGTCCCACTCACTCCTCCGATCATCATGCAGATaGCGCGGAAGGCTGAGTCCT +
Preference number: 4 (lower is better)
Translates to: RTDGRTGKASGFESHSLLRSSCR*RGRLSP
Trigger: AGGACTCAGCCTTCCGCGGCATCTGCATGATGATCG...GAGGAGTGAGTGGGACTCAAATCCAGATGCCTTCCCCGTCCGTCCGTCCGTCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000589149.5
CDS-3UTR GCA 90 bp GCACTCCCCAGTAATCCCTCCGACGACGACGCAGACAGAAACCTGGCAGTCTCCAGCAGCGGCGGGAATTaGTCAGAGAACTGCTGCCAG +
Preference number: 4 (lower is better)
Translates to: ALPSNPSDDDADRNLAVSSSGGN*SENCCQ
Trigger: CTGGCAGCAGTTCTCTGAGCAATTCCCGCCGCTGCT...GGAGACTGCCAGGTTTCTGTCTGCGTCGTCGTCGGAGGGATTACTGGGGAGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000589149.5
ENST00000592287.5
CDS-3UTR GCA 90 bp CCACGTAGCTGGCCCAAGTGGGCTGCCAGAGATGACCCTATTAGAGCCCAGGGGACAGCGACTTCCGGATaGAGCGCACTCCCCAGTAAT +
Preference number: 4 (lower is better)
Translates to: PRSWPKWAARDDPIRAQGTATSG*SALPSN
Trigger: ATTACTGGGGAGTGCGCTGCATCCGGAAGTCGCTGT...CCCCTGGGCTCTAATAGGGTCATCTCTGGCAGCCCACTTGGGCCAGCTACGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR GCA 90 bp GGCACAGCGACTTCCGGATGCAGCGCACTCCCCAGTAATCCCTCCGACGACGACAATGCTAAGGGGGTCTaGAAGGCCCAGTTTTCTGGC +
Preference number: 4 (lower is better)
Translates to: GTATSGCSALPSNPSDDDNAKGV*KAQFSG
Trigger: GCCAGAAAACTGGGCCTTGCAGACCCCCTTAGCATT...GTCGTCGTCGGAGGGATTACTGGGGAGTGCGCTGCATCCGGAAGTCGCTGTGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR CCA 90 bp CTCTCTTCAGGAAAAAGGTCCCAACCCAGTGTCTTCAAAAGCCACTGGAGCACAAGCCCCGACATGGCCTaGCTCCGAGGCCCCACCCCC +
Preference number: 4 (lower is better)
Translates to: LSSGKRSQPSVFKSHWSTSPDMA*LRGPTP
Trigger: GGGGGTGGGGCCTCGGAGCCAGGCCATGTCGGGGCT...TGTGCTCCAGTGGCTTTTGAAGACACTGGGTTGGGACCTTTTTCCTGAAGAGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000356861.9
CDS-3UTR CCA 90 bp GGTCAGCTGTGTAATTCCTCCCTCCCACGTAGCTGGCCCAAGTGGGCTGCCAGAGTCTGCCACAGGGGGTaGGAAGCTCTGATAGTGTGC +
Preference number: 4 (lower is better)
Translates to: GQLCNSSLPRSWPKWAARVCHRG*EALIVC
Trigger: GCACACTATCAGAGCTTCCCACCCCCTGTGGCAGAC...TCTGGCAGCCCACTTGGGCCAGCTACGTGGGAGGGAGGAATTACACAGCTGACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR CCA 90 bp GACGGACGGGGAAGGCATCTGGATTTGAGTCCCACTCACTCCTCCCTAACCCCCGTCTGCCACAGGGGGTaGGAAGCTCTGATAGTGTGC +
Preference number: 4 (lower is better)
Translates to: DGRGRHLDLSPTHSSLTPVCHRG*EALIVC
Trigger: GCACACTATCAGAGCTTCCCACCCCCTGTGGCAGAC...GGGGGTTAGGGAGGAGTGAGTGGGACTCAAATCCAGATGCCTTCCCCGTCCGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR CCA 90 bp GGGTTCACTAATTCTACTGTCTCCATGCAGTCGGGGAAATGGTGGAGCGGCTGGAGCAGGTTGCAGAGCTaGGGCAGCAGCTCGGGCCAC +
Preference number: 4 (lower is better)
Translates to: GFTNSTVSMQSGKWWSGWSRLQS*GSSSGH
Trigger: GTGGCCCGAGCTGCTGCCCCAGCTCTGCAACCTGCT...CCAGCCGCTCCACCATTTCCCCGACTGCATGGAGACAGTAGAATTAGTGAACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR CCA 90 bp TTGAGGGGCCTGTTGAGGGCGTCACTGTCCAGAAGCTCTGATGAGTCTTCACAGAGCAGGTTGCAGAGCTaGGGCAGCAGCTCGGGCCAC +
Preference number: 4 (lower is better)
Translates to: LRGLLRASLSRSSDESSQSRLQS*GSSSGH
Trigger: GTGGCCCGAGCTGCTGCCCCAGCTCTGCAACCTGCT...CTGTGAAGACTCATCAGAGCTTCTGGACAGTGACGCCCTCAACAGGCCCCTCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586775.5
ENST00000587654.5
CDS-3UTR CCA 90 bp AAGTTCTACACAAGTGGAATCTCACGCCACCTCGGCGCCAATCCCCAGCACAGCACGCAGGCGATGGCGTaGGACCGGATCTTGGGACTG +
Preference number: 4 (lower is better)
Translates to: KFYTSGISRHLGANPQHSTQAMA*DRILGL
Trigger: CAGTCCCAAGATCCGGTCCCACGCCATCGCCTGCGT...GCTGTGCTGGGGATTGGCGCCGAGGTGGCGTGAGATTCCACTTGTGTAGAACTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356861.9
CDS-3UTR CCA 90 bp CTGACCTGCTCCTCCCTCACCTCATCCGAAGCCGGATTCGGTCAGCTGTGTAATACGCAGGCGATGGCGTaGGACCGGATCTTGGGACTG +
Preference number: 4 (lower is better)
Translates to: LTCSSLTSSEAGFGQLCNTQAMA*DRILGL
Trigger: CAGTCCCAAGATCCGGTCCCACGCCATCGCCTGCGT...ATTACACAGCTGACCGAATCCGGCTTCGGATGAGGTGAGGGAGGAGCAGGTCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR CCA 90 bp CAGGAACTTGGGGATCATGATGTTGAGGGGCCTGTTGAGGGCGTCACTGTCCAGACGCAGGCGATGGCGTaGGACCGGATCTTGGGACTG +
Preference number: 4 (lower is better)
Translates to: QELGDHDVEGPVEGVTVQTQAMA*DRILGL
Trigger: CAGTCCCAAGATCCGGTCCCACGCCATCGCCTGCGT...CTGGACAGTGACGCCCTCAACAGGCCCCTCAACATCATGATCCCCAAGTTCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586775.5
CDS-3UTR CCA 90 bp GGTGACCTCTGGCCAGCCCCAGCCACTCCAGTGGTTCTCACCCTGCGAGCTAGGCTCTGCAGCATGTACTaGATGATGCTGTGCATGTGG +
Preference number: 4 (lower is better)
Translates to: GDLWPAPATPVVLTLRARLCSMY*MMLCMW
Trigger: CCACATGCACAGCATCATCCAGTACATGCTGCAGAG...CCTAGCTCGCAGGGTGAGAACCACTGGAGTGGCTGGGGCTGGCCAGAGGTCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR CCA 90 bp GCAGCGCACTCCCCAGTAATCCCTCCGACGACGACGCAGACAGAAACCTGGCAGACCGTGCGTGACTTGTaGAAGCGTGGCTTGATGTCC +
Preference number: 4 (lower is better)
Translates to: AAHSPVIPPTTTQTETWQTVRDL*KRGLMS
Trigger: GGACATCAAGCCACGCTTCCACAAGTCACGCACGGT...CTGCCAGGTTTCTGTCTGCGTCGTCGTCGGAGGGATTACTGGGGAGTGCGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000592287.5
CDS-3UTR CCA 90 bp GACGGACGGGGAAGGCATCTGGATTTGAGTCCCACTCACTCCTCCCTAACCCCCACCACCCACTCGGGGTaGAAGAGGAGGCCTTTGAGT +
Preference number: 4 (lower is better)
Translates to: DGRGRHLDLSPTHSSLTPTTHSG*KRRPLS
Trigger: ACTCAAAGGCCTCCTCTTCCACCCCGAGTGGGTGGT...GGGGGTTAGGGAGGAGTGAGTGGGACTCAAATCCAGATGCCTTCCCCGTCCGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR CCA 90 bp TGCAGCGCACTCCCCAGTAATCCCTCCGACGACGACGCAGACAGAAACCTGGCAACCACCCACTCGGGGTaGAAGAGGAGGCCTTTGAGT +
Preference number: 4 (lower is better)
Translates to: CSALPSNPSDDDADRNLATTHSG*KRRPLS
Trigger: ACTCAAAGGCCTCCTCTTCCACCCCGAGTGGGTGGT...TGCCAGGTTTCTGTCTGCGTCGTCGTCGGAGGGATTACTGGGGAGTGCGCTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000592287.5
CDS-3UTR CCA 90 bp GCACTCCCCAGTAATCCCTCCGACGACGACGCAGACAGAAACCTGGCAGTCTCCACCACCCACTCGGGGTaGAAGAGGAGGCCTTTGAGT +
Preference number: 4 (lower is better)
Translates to: ALPSNPSDDDADRNLAVSTTHSG*KRRPLS
Trigger: ACTCAAAGGCCTCCTCTTCCACCCCGAGTGGGTGGT...GGAGACTGCCAGGTTTCTGTCTGCGTCGTCGTCGGAGGGATTACTGGGGAGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000592287.5
CDS-3UTR CCA 90 bp CCCAGTAATCCCTCCGACGACGACGCAGACAGAAACCTGGCAGTCTCCATGATCGGCTGGTTGAGGTGGTaGCCTACAGAGTCGGCCAGG +
Preference number: 4 (lower is better)
Translates to: PSNPSDDDADRNLAVSMIGWLRW*PTESAR
Trigger: CCTGGCCGACTCTGTAGGCCACCACCTCAACCAGCC...GATCATGGAGACTGCCAGGTTTCTGTCTGCGTCGTCGTCGGAGGGATTACTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000592287.5
CDS-3UTR CCA 90 bp CAGGGCACAGCGACTTCCGGATGCAGCGCACTCCCCAGTAATCCCTCCGACGACTGGATGTATTCCGGCTaGTTGAGGTGGTGGCCTACA +
Preference number: 4 (lower is better)
Translates to: QGTATSGCSALPSNPSDDWMYSG*LRWWPT
Trigger: TGTAGGCCACCACCTCAACCAGCCGGAATACATCCA...GTCGTCGGAGGGATTACTGGGGAGTGCGCTGCATCCGGAAGTCGCTGTGCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000592287.5
CDS-3UTR CCA 90 bp CACTCCCCAGTAATCCCTCCGACGACGACGCAGACAGAAACCTGGCAGTCTCCACACTCTGCAGGGCGGTaGCCACCGATGACAGACACT +
Preference number: 4 (lower is better)
Translates to: HSPVIPPTTTQTETWQSPHSAGR*PPMTDT
Trigger: AGTGTCTGTCATCGGTGGCCACCGCCCTGCAGAGTG...TGGAGACTGCCAGGTTTCTGTCTGCGTCGTCGTCGGAGGGATTACTGGGGAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000592287.5
CDS-3UTR CCA 90 bp GACGGACGGACGGACGGACGGGGAAGGCATCTGGATTTGAGTCCCACTCACTCCGACGGAGATGAACTCTaGGTTCAGGTTGGTGCCCAG +
Preference number: 4 (lower is better)
Translates to: DGRTDGRGRHLDLSPTHSDGDEL*VQVGAQ
Trigger: CTGGGCACCAACCTGAACCCAGAGTTCATCTCCGTC...GGAGTGAGTGGGACTCAAATCCAGATGCCTTCCCCGTCCGTCCGTCCGTCCGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR CCA 90 bp GGCACAGCGACTTCCGGATGCAGCGCACTCCCCAGTAATCCCTCCGACGACGACTGCAGATTTCACCAATaGCCCAGGTGGCGTTGTTGC +
Preference number: 4 (lower is better)
Translates to: GTATSGCSALPSNPSDDDCRFHQ*PRWRCC
Trigger: GCAACAACGCCACCTGGGCCATTGGTGAAATCTGCA...GTCGTCGTCGGAGGGATTACTGGGGAGTGCGCTGCATCCGGAAGTCGCTGTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000592287.5
CDS-3UTR CCA 90 bp CAGGGCACAGCGACTTCCGGATGCAGCGCACTCCCCAGTAATCCCTCCGACGACTGCAGATTTCACCAATaGCCCAGGTGGCGTTGTTGC +
Preference number: 4 (lower is better)
Translates to: QGTATSGCSALPSNPSDDCRFHQ*PRWRCC
Trigger: GCAACAACGCCACCTGGGCCATTGGTGAAATCTGCA...GTCGTCGGAGGGATTACTGGGGAGTGCGCTGCATCCGGAAGTCGCTGTGCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000592287.5
CDS-3UTR CCA 90 bp CTGACCTGCTCCTCCCTCACCTCATCCGAAGCCGGATTCGGTCAGCTGTGTAATTCCCTCCCACGTAGCTaGCCCAAGTGGGCTGCCAGA +
Preference number: 4 (lower is better)
Translates to: LTCSSLTSSEAGFGQLCNSLPRS*PKWAAR
Trigger: TCTGGCAGCCCACTTGGGCCAGCTACGTGGGAGGGA...ATTACACAGCTGACCGAATCCGGCTTCGGATGAGGTGAGGGAGGAGCAGGTCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR CCA 90 bp ATGCTCGGGGTAGGTGCCAGTAGCTCTGGCTACACCCAGCTCTCTTCAGGAAAACAGTCGGGGAAATGGTaGAGCGGCTGGCCCAGCCTC +
Preference number: 4 (lower is better)
Translates to: MLGVGASSSGYTQLSSGKQSGKW*SGWPSL
Trigger: GAGGCTGGGCCAGCCGCTCCACCATTTCCCCGACTG...TTTTCCTGAAGAGAGCTGGGTGTAGCCAGAGCTACTGGCACCTACCCCGAGCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR CCA 90 bp GACGGACGGGGAAGGCATCTGGATTTGAGTCCCACTCACTCCTCCCTAACCCCCCTGGCAGGGAGTGTGTaGAGTGGGTCCCAAGCATGT +
Preference number: 4 (lower is better)
Translates to: DGRGRHLDLSPTHSSLTPLAGSV*SGSQAC
Trigger: ACATGCTTGGGACCCACTCCACACACTCCCTGCCAG...GGGGGTTAGGGAGGAGTGAGTGGGACTCAAATCCAGATGCCTTCCCCGTCCGTC
60% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR CCA 90 bp TGCAGCGCACTCCCCAGTAATCCCTCCGACGACGACGCAGACAGAAACCTGGCACTGGCAGGGAGTGTGTaGAGTGGGTCCCAAGCATGT +
Preference number: 4 (lower is better)
Translates to: CSALPSNPSDDDADRNLALAGSV*SGSQAC
Trigger: ACATGCTTGGGACCCACTCCACACACTCCCTGCCAG...TGCCAGGTTTCTGTCTGCGTCGTCGTCGGAGGGATTACTGGGGAGTGCGCTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR CCA 90 bp CACTCTGCAGGGCGGTGGCCACCGATGACAGACACTCCAGCAGGGGGAAGAGGTGGGGGCATCAGCTTCTaGATGTATTCCACGCTGTCT +
Preference number: 4 (lower is better)
Translates to: HSAGRWPPMTDTPAGGRGGGISF*MYSTLS
Trigger: AGACAGCGTGGAATACATCCAGAAGCTGATGCCCCC...ACCTCTTCCCCCTGCTGGAGTGTCTGTCATCGGTGGCCACCGCCCTGCAGAGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000589572.5
CDS-3UTR TCA 90 bp ATCCTCCGAGTTAAGCAGGTTGCAGAGCTGGGGCAGCAGCTCGGGCCACATCTGTGTGTTGGGCGACTGTaGGTCTTTGAGCAGCTGCAG +
Preference number: 4 (lower is better)
Translates to: ILRVKQVAELGQQLGPHLCVGRL*VFEQLQ
Trigger: CTGCAGCTGCTCAAAGACTCACAGTCGCCCAACACA...CAGATGTGGCCCGAGCTGCTGCCCCAGCTCTGCAACCTGCTTAACTCGGAGGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586775.5
ENST00000587654.5
CDS-3UTR TCA 90 bp GGATGCAGCGCACTCCCCAGTAATCCCTCCGACGACGACGCAGACAGAAACCTGTGTGTTGGGCGACTGTaGGTCTTTGAGCAGCTGCAG +
Preference number: 4 (lower is better)
Translates to: GCSALPSNPSDDDADRNLCVGRL*VFEQLQ
Trigger: CTGCAGCTGCTCAAAGACTCACAGTCGCCCAACACA...CAGGTTTCTGTCTGCGTCGTCGTCGGAGGGATTACTGGGGAGTGCGCTGCATCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000592287.5
CDS-3UTR TCA 90 bp GGTCAGCTGTGTAATTCCTCCCTCCCACGTAGCTGGCCCAAGTGGGCTGCCAGATGTGCATGTGGGGGATaGGCCTGTCAATCCGCACTT +
Preference number: 4 (lower is better)
Translates to: GQLCNSSLPRSWPKWAARCACGG*ACQSAL
Trigger: AAGTGCGGATTGACAGGCTCATCCCCCACATGCACA...TCTGGCAGCCCACTTGGGCCAGCTACGTGGGAGGGAGGAATTACACAGCTGACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR TCA 90 bp CATGCACTGGAACAGCAATGTCATGATGTTGCTGCGGGCCACCAGCTGCTCCACTGTCCAGGATGTAGCTaGGGTAGGGCACCAGCTCCG +
Preference number: 4 (lower is better)
Translates to: HALEQQCHDVAAGHQLLHCPGCS*GRAPAP
Trigger: CGGAGCTGGTGCCCTACCTCAGCTACATCCTGGACA...GTGGAGCAGCTGGTGGCCCGCAGCAACATCATGACATTGCTGTTCCAGTGCATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588491.1
CDS-3UTR TCA 90 bp CCCAGTAATCCCTCCGACGACGACGCAGACAGAAACCTGGCAGTCTCCATGATCTGTCCAGGATGTAGCTaGGGTAGGGCACCAGCTCCG +
Preference number: 4 (lower is better)
Translates to: PSNPSDDDADRNLAVSMICPGCS*GRAPAP
Trigger: CGGAGCTGGTGCCCTACCTCAGCTACATCCTGGACA...GATCATGGAGACTGCCAGGTTTCTGTCTGCGTCGTCGTCGGAGGGATTACTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000592287.5
CDS-3UTR TCA 90 bp ACTTCCGGATGCAGCGCACTCCCCAGTAATCCCTCCGACGACGACGCAGACAGATGTATTCCGGCTGGTTaGGGTGGTGGCCTACAGAGT +
Preference number: 4 (lower is better)
Translates to: TSGCSALPSNPSDDDADRCIPAG*GGGLQS
Trigger: ACTCTGTAGGCCACCACCTCAACCAGCCGGAATACA...TCTGTCTGCGTCGTCGTCGGAGGGATTACTGGGGAGTGCGCTGCATCCGGAAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000592287.5
CDS-3UTR TCA 90 bp GGCACAGCGACTTCCGGATGCAGCGCACTCCCCAGTAATCCCTCCGACGACGACCCTTGTCTTCGTCCTTaGGCTCATTCCACTTCTGGA +
Preference number: 4 (lower is better)
Translates to: GTATSGCSALPSNPSDDDPCLRP*AHSTSG
Trigger: TCCAGAAGTGGAATGAGCTCAAGGACGAAGACAAGG...GTCGTCGTCGGAGGGATTACTGGGGAGTGCGCTGCATCCGGAAGTCGCTGTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000592287.5
CDS-3UTR TCA 90 bp TCCGGATGCAGCGCACTCCCCAGTAATCCCTCCGACGACGACGCAGACAGAAACCCAGTGCTACGATCATaGAGTCCTTGTCGGGAGCCT +
Preference number: 4 (lower is better)
Translates to: SGCSALPSNPSDDDADRNPVLRS*SPCREP
Trigger: AGGCTCCCGACAAGGACTTCATGATCGTAGCACTGG...GTTTCTGTCTGCGTCGTCGTCGGAGGGATTACTGGGGAGTGCGCTGCATCCGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000592287.5
CDS-3UTR TCA 90 bp GGATGCAGCGCACTCCCCAGTAATCCCTCCGACGACGACGCAGACAGAAACCTGGGAACAGCAATGTCATaGTGTTGCTGCGGGCCACCA +
Preference number: 4 (lower is better)
Translates to: GCSALPSNPSDDDADRNLGTAMS*CCCGPP
Trigger: TGGTGGCCCGCAGCAACATCATGACATTGCTGTTCC...CAGGTTTCTGTCTGCGTCGTCGTCGGAGGGATTACTGGGGAGTGCGCTGCATCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000592287.5
CDS-3UTR TCA 90 bp TGTGTAATTCCTCCCTCCCACGTAGCTGGCCCAAGTGGGCTGCCAGAGATGACCTGCCCAGAATGGGCATaGACTCGGCGATACAGGGCT +
Preference number: 4 (lower is better)
Translates to: CVIPPSHVAGPSGLPEMTCPEWA*TRRYRA
Trigger: AGCCCTGTATCGCCGAGTTCATGCCCATTCTGGGCA...GGTCATCTCTGGCAGCCCACTTGGGCCAGCTACGTGGGAGGGAGGAATTACACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR TCA 90 bp GTGGGTCCCAAGCATGTGCGTGCTGACAGGGCGACTCCCAAGGTCACCATCCTCTGTTGCAGACGGAGATaGACTCTGGGTTCAGGTTGG +
Preference number: 4 (lower is better)
Translates to: VGPKHVRADRATPKVTILCCRRR*TLGSGW
Trigger: CCAACCTGAACCCAGAGTTCATCTCCGTCTGCAACA...GAGGATGGTGACCTTGGGAGTCGCCCTGTCAGCACGCACATGCTTGGGACCCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR TCA 90 bp GCAGCGCACTCCCCAGTAATCCCTCCGACGACGACGCAGACAGAAACCTGGCAGACCTGGCAGTCTCCATaGTCACCTAGACCCCATAGA +
Preference number: 4 (lower is better)
Translates to: AAHSPVIPPTTTQTETWQTWQSP*SPRPHR
Trigger: TCTATGGGGTCTAGGTGATCATGGAGACTGCCAGGT...CTGCCAGGTTTCTGTCTGCGTCGTCGTCGGAGGGATTACTGGGGAGTGCGCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000589149.5
ENST00000592287.5
CDS-3UTR TCA 90 bp ACGGACGGACGGACGGGGAAGGCATCTGGATTTGAGTCCCACTCACTCCTCCCTGAAGGCATCTGGATTTaGGTCCCACTCACTCCTCCC +
Preference number: 4 (lower is better)
Translates to: TDGRTGKASGFESHSLLPEGIWI*VPLTPP
Trigger: GGGAGGAGTGAGTGGGACTCAAATCCAGATGCCTTC...AGGGAGGAGTGAGTGGGACTCAAATCCAGATGCCTTCCCCGTCCGTCCGTCCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000589149.5
CDS-3UTR TCA 90 bp CGGACGGACGGACGGACGGGGAAGGCATCTGGATTTGAGTCCCACTCACTCCTCGAGCCCCTTCCACCTTaGCCATGTTCCCAGACTATT +
Preference number: 4 (lower is better)
Translates to: RTDGRTGKASGFESHSLLEPLPP*PCSQTI
Trigger: AATAGTCTGGGAACATGGTCAAGGTGGAAGGGGCTC...GAGGAGTGAGTGGGACTCAAATCCAGATGCCTTCCCCGTCCGTCCGTCCGTCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR GCA 90 bp CCAGAAGCTCTGATGAGTCTTCACAGATCTTCTGCAGGGCTCCAAAGGCTCCCTCCCTGCTCGTCTGGCTaGCAGTCCATGGCGCAAGGC +
Preference number: 4 (lower is better)
Translates to: PEALMSLHRSSAGLQRLPPCSSG*QSMAQG
Trigger: GCCTTGCGCCATGGACTGGCAGCCAGACGAGCAGGG...AGGGAGCCTTTGGAGCCCTGCAGAAGATCTGTGAAGACTCATCAGAGCTTCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586775.5
ENST00000587654.5
CDS-3UTR GCA 90 bp CCAGAAGCTCTGATGAGTCTTCACAGATCTTCTGCAGGGCTCCAAAGGCTCCCTACCTGCTGCAGGCCCTaGTCGTCTGGCTGCCAGTCC +
Preference number: 4 (lower is better)
Translates to: PEALMSLHRSSAGLQRLPTCCRP*SSGCQS
Trigger: GGACTGGCAGCCAGACGAGCAGGGCCTGCAGCAGGT...AGGGAGCCTTTGGAGCCCTGCAGAAGATCTGTGAAGACTCATCAGAGCTTCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586775.5
ENST00000587654.5
CDS-3UTR GCA 90 bp CCACGTAGCTGGCCCAAGTGGGCTGCCAGAGATGACCCTATTAGAGCCCAGGGGGTTTATCCTGCACGATaGGCTGAGTGGCTGTGTTGG +
Preference number: 4 (lower is better)
Translates to: PRSWPKWAARDDPIRAQGVYPAR*AEWLCW
Trigger: CCAACACAGCCACTCAGCGCATCGTGCAGGATAAAC...CCCCTGGGCTCTAATAGGGTCATCTCTGGCAGCCCACTTGGGCCAGCTACGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR GCA 90 bp GTGGGTCCCAAGCATGTGCGTGCTGACAGGGCGACTCCCAAGGTCACCATCCTCCTGTTTGATGAAGTCTaGCACAGGGGGTGGGAAGCT +
Preference number: 4 (lower is better)
Translates to: VGPKHVRADRATPKVTILLFDEV*HRGWEA
Trigger: AGCTTCCCACCCCCTGTGGCAGACTTCATCAAACAG...GAGGATGGTGACCTTGGGAGTCGCCCTGTCAGCACGCACATGCTTGGGACCCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR GCA 90 bp GCAGCGCACTCCCCAGTAATCCCTCCGACGACGACGCAGACAGAAACCTGGCAGTACTGGATGATGCTGTaGATGTGGGGGATGAGCCTG +
Preference number: 4 (lower is better)
Translates to: AAHSPVIPPTTTQTETWQYWMML*MWGMSL
Trigger: CAGGCTCATCCCCCACATGCACAGCATCATCCAGTA...CTGCCAGGTTTCTGTCTGCGTCGTCGTCGGAGGGATTACTGGGGAGTGCGCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000592287.5
CDS-3UTR GCA 90 bp CTCCCCAGTAATCCCTCCGACGACGACGCAGACAGAAACCTGGCAGTCTCCATGTCGGGAGCCTCATACTaGTCAGGGTGCTGGGTGTAC +
Preference number: 4 (lower is better)
Translates to: LPSNPSDDDADRNLAVSMSGASY*SGCWVY
Trigger: GTACACCCAGCACCCTGAGCAGTATGAGGCTCCCGA...CATGGAGACTGCCAGGTTTCTGTCTGCGTCGTCGTCGGAGGGATTACTGGGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000592287.5
CDS-3UTR GCA 90 bp GACGGACGGGGAAGGCATCTGGATTTGAGTCCCACTCACTCCTCCCTAACCCCCCGATCATCATGCAGATaGCGCGGAAGGCTGAGTCCT +
Preference number: 4 (lower is better)
Translates to: DGRGRHLDLSPTHSSLTPRSSCR*RGRLSP
Trigger: AGGACTCAGCCTTCCGCGGCATCTGCATGATGATCG...GGGGGTTAGGGAGGAGTGAGTGGGACTCAAATCCAGATGCCTTCCCCGTCCGTC
59% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000589149.5
CDS-3UTR GCA 90 bp CTCCCCAGTAATCCCTCCGACGACGACGCAGACAGAAACCTGGCAGTCTCCATGAGCAGCGGCGGGAATTaGTCAGAGAACTGCTGCCAG +
Preference number: 4 (lower is better)
Translates to: LPSNPSDDDADRNLAVSMSSGGN*SENCCQ
Trigger: CTGGCAGCAGTTCTCTGAGCAATTCCCGCCGCTGCT...CATGGAGACTGCCAGGTTTCTGTCTGCGTCGTCGTCGGAGGGATTACTGGGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000589149.5
ENST00000592287.5
CDS-3UTR GCA 90 bp TGTGTAATTCCTCCCTCCCACGTAGCTGGCCCAAGTGGGCTGCCAGAGATGACCAGCAGCGGCGGGAATTaGTCAGAGAACTGCTGCCAG +
Preference number: 4 (lower is better)
Translates to: CVIPPSHVAGPSGLPEMTSSGGN*SENCCQ
Trigger: CTGGCAGCAGTTCTCTGAGCAATTCCCGCCGCTGCT...GGTCATCTCTGGCAGCCCACTTGGGCCAGCTACGTGGGAGGGAGGAATTACACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR GCA 90 bp ACTTCCGGATGCAGCGCACTCCCCAGTAATCCCTCCGACGACGACGCAGACAGAACAGCGACTTCCGGATaGAGCGCACTCCCCAGTAAT +
Preference number: 4 (lower is better)
Translates to: TSGCSALPSNPSDDDADRTATSG*SALPSN
Trigger: ATTACTGGGGAGTGCGCTGCATCCGGAAGTCGCTGT...TCTGTCTGCGTCGTCGTCGGAGGGATTACTGGGGAGTGCGCTGCATCCGGAAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000589149.5
ENST00000592287.5
CDS-3UTR GCA 90 bp GGTCAGCTGTGTAATTCCTCCCTCCCACGTAGCTGGCCCAAGTGGGCTGCCAGATTCATGGGGTGGGCGTaGAGGGACACCCAGCTAATT +
Preference number: 4 (lower is better)
Translates to: GQLCNSSLPRSWPKWAARFMGWA*RDTQLI
Trigger: AATTAGCTGGGTGTCCCTGCACGCCCACCCCATGAA...TCTGGCAGCCCACTTGGGCCAGCTACGTGGGAGGGAGGAATTACACAGCTGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR GCA 90 bp TCCGGATGCAGCGCACTCCCCAGTAATCCCTCCGACGACGACGCAGACAGAAACTGGCTTCCAGAGACCTaGTCGAGTTTCATGGGGTGG +
Preference number: 4 (lower is better)
Translates to: SGCSALPSNPSDDDADRNWLPET*SSFMGW
Trigger: CCACCCCATGAAACTCGAGCAGGTCTCTGGAAGCCA...GTTTCTGTCTGCGTCGTCGTCGGAGGGATTACTGGGGAGTGCGCTGCATCCGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR GCA 90 bp ACGGACGGACGGACGGGGAAGGCATCTGGATTTGAGTCCCACTCACTCCTCCCTCCTGTCCCCTGTTCCTaGCCTTCAAGCTCAGTGGAT +
Preference number: 4 (lower is better)
Translates to: TDGRTGKASGFESHSLLPPVPCS*PSSSVD
Trigger: ATCCACTGAGCTTGAAGGGCAGGAACAGGGGACAGG...AGGGAGGAGTGAGTGGGACTCAAATCCAGATGCCTTCCCCGTCCGTCCGTCCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450764.6
CDS-3UTR CCA 90 bp AGTGTTGTAATCCTCCGAGTTAAGCAGGTTGCAGAGCTGGGGCAGCAGCTCGGGGCACGATGCGCTGAGTaGCTGTGTTGGGCGACTGTG +
Preference number: 4 (lower is better)
Translates to: SVVILRVKQVAELGQQLGARCAE*LCWATV
Trigger: CACAGTCGCCCAACACAGCCACTCAGCGCATCGTGC...CCCGAGCTGCTGCCCCAGCTCTGCAACCTGCTTAACTCGGAGGATTACAACACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000586775.5
ENST00000587654.5
CDS-3UTR CCA 90 bp CTCCCCAGTAATCCCTCCGACGACGACGCAGACAGAAACCTGGCAGTCTCCATGGTCTGCCACAGGGGGTaGGAAGCTCTGATAGTGTGC +
Preference number: 4 (lower is better)
Translates to: LPSNPSDDDADRNLAVSMVCHRG*EALIVC
Trigger: GCACACTATCAGAGCTTCCCACCCCCTGTGGCAGAC...CATGGAGACTGCCAGGTTTCTGTCTGCGTCGTCGTCGGAGGGATTACTGGGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000592287.5
CDS-3UTR CCA 90 bp CTCGATGAAGGTGTCAATATTGTCCATCAGCGCCTGGGCCCGGTCCATGATGAAAGCAGGTTGCAGAGCTaGGGCAGCAGCTCGGGCCAC +
Preference number: 4 (lower is better)
Translates to: LDEGVNIVHQRLGPVHDESRLQS*GSSSGH
Trigger: GTGGCCCGAGCTGCTGCCCCAGCTCTGCAACCTGCT...TTCATCATGGACCGGGCCCAGGCGCTGATGGACAATATTGACACCTTCATCGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586775.5
CDS-3UTR CCA 90 bp TTGAGGGGCCTGTTGAGGGCGTCACTGTCCAGAAGCTCTGATGAGTCTTCACAGGGTTCACGCAGGCGATaGCGTGGGACCGGATCTTGG +
Preference number: 4 (lower is better)
Translates to: LRGLLRASLSRSSDESSQGSRRR*RGTGSW
Trigger: CCAAGATCCGGTCCCACGCCATCGCCTGCGTGAACC...CTGTGAAGACTCATCAGAGCTTCTGGACAGTGACGCCCTCAACAGGCCCCTCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586775.5
CDS-3UTR CCA 90 bp CAGGGCACAGCGACTTCCGGATGCAGCGCACTCCCCAGTAATCCCTCCGACGACTTCTCATCATGGTCCTaGGTCCTCTGCAGCATGTAC +
Preference number: 4 (lower is better)
Translates to: QGTATSGCSALPSNPSDDFSSWS*VLCSMY
Trigger: GTACATGCTGCAGAGGACCCAGGACCATGATGAGAA...GTCGTCGGAGGGATTACTGGGGAGTGCGCTGCATCCGGAAGTCGCTGTGCCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000592287.5
CDS-3UTR CCA 90 bp TGCAGCGCACTCCCCAGTAATCCCTCCGACGACGACGCAGACAGAAACCTGGCAGCAACGTTCTCATCATaGTCCTGGGTCCTCTGCAGC +
Preference number: 4 (lower is better)
Translates to: CSALPSNPSDDDADRNLAATFSS*SWVLCS
Trigger: GCTGCAGAGGACCCAGGACCATGATGAGAACGTTGC...TGCCAGGTTTCTGTCTGCGTCGTCGTCGGAGGGATTACTGGGGAGTGCGCTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000592287.5
CDS-3UTR CCA 90 bp GACGGACGGGGAAGGCATCTGGATTTGAGTCCCACTCACTCCTCCCTAACCCCCAAGATGGGGATCAACTaGACCAGATGGGAGGCCAGG +
Preference number: 4 (lower is better)
Translates to: DGRGRHLDLSPTHSSLTPKMGIN*TRWEAR
Trigger: CCTGGCCTCCCATCTGGTCCAGTTGATCCCCATCTT...GGGGGTTAGGGAGGAGTGAGTGGGACTCAAATCCAGATGCCTTCCCCGTCCGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR CCA 90 bp GGATGCAGCGCACTCCCCAGTAATCCCTCCGACGACGACGCAGACAGAAACCTGAAGATGGGGATCAACTaGACCAGATGGGAGGCCAGG +
Preference number: 4 (lower is better)
Translates to: GCSALPSNPSDDDADRNLKMGIN*TRWEAR
Trigger: CCTGGCCTCCCATCTGGTCCAGTTGATCCCCATCTT...CAGGTTTCTGTCTGCGTCGTCGTCGGAGGGATTACTGGGGAGTGCGCTGCATCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000592287.5
CDS-3UTR CCA 90 bp AATGGTGGAGCGGCTGGCCCAGCCTCGCCGGTTATGGCACCCGCACATGCGTGTTCCCATTCACCAAGATaGGGATCAACTGGACCAGAT +
Preference number: 4 (lower is better)
Translates to: NGGAAGPASPVMAPAHACSHSPR*GSTGPD
Trigger: ATCTGGTCCAGTTGATCCCCATCTTGGTGAATGGGA...ACACGCATGTGCGGGTGCCATAACCGGCGAGGCTGGGCCAGCCGCTCCACCATT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR CCA 90 bp GCGTGCAGGGACACCCAGCTAATTTATGGAATGTGTACTGAGTGCCCCTTGGAAGGCCGCTCAGCCTCGTaGGGCAGTGTGACCGTGCGT +
Preference number: 4 (lower is better)
Translates to: ACRDTQLIYGMCTECPLEGRSAS*GSVTVR
Trigger: ACGCACGGTCACACTGCCCCACGAGGCTGAGCGGCC...TTCCAAGGGGCACTCAGTACACATTCCATAAATTAGCTGGGTGTCCCTGCACGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR CCA 90 bp ACTTCCGGATGCAGCGCACTCCCCAGTAATCCCTCCGACGACGACGCAGACAGATTATCCGACAGGCACTaGATCAGGTGCGGGATCAGC +
Preference number: 4 (lower is better)
Translates to: TSGCSALPSNPSDDDADRLSDRH*IRCGIS
Trigger: GCTGATCCCGCACCTGATCCAGTGCCTGTCGGATAA...TCTGTCTGCGTCGTCGTCGGAGGGATTACTGGGGAGTGCGCTGCATCCGGAAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000592287.5
CDS-3UTR CCA 90 bp AGGATCTCTGGGCTCACTGGGTACTATGATGAGCAGGAAGTCCCAGGGAGATGGGGCTGGTTGAGGTGGTaGCCTACAGAGTCGGCCAGG +
Preference number: 4 (lower is better)
Translates to: RISGLTGYYDEQEVPGRWGWLRW*PTESAR
Trigger: CCTGGCCGACTCTGTAGGCCACCACCTCAACCAGCC...CCATCTCCCTGGGACTTCCTGCTCATCATAGTACCCAGTGAGCCCAGAGATCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR CCA 90 bp TCCAGTGCTACGATCATGAAGTCCTTGTCGGGAGCCTCATACTGCTCAGGGTGCGGCTGGTTGAGGTGGTaGCCTACAGAGTCGGCCAGG +
Preference number: 4 (lower is better)
Translates to: SSATIMKSLSGASYCSGCGWLRW*PTESAR
Trigger: CCTGGCCGACTCTGTAGGCCACCACCTCAACCAGCC...GCACCCTGAGCAGTATGAGGCTCCCGACAAGGACTTCATGATCGTAGCACTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588491.1
ENST00000589572.5
CDS-3UTR CCA 90 bp CCACGTAGCTGGCCCAAGTGGGCTGCCAGAGATGACCCTATTAGAGCCCAGGGGTGGATGTATTCCGGCTaGTTGAGGTGGTGGCCTACA +
Preference number: 4 (lower is better)
Translates to: PRSWPKWAARDDPIRAQGWMYSG*LRWWPT
Trigger: TGTAGGCCACCACCTCAACCAGCCGGAATACATCCA...CCCCTGGGCTCTAATAGGGTCATCTCTGGCAGCCCACTTGGGCCAGCTACGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR CCA 90 bp GCACTCCCCAGTAATCCCTCCGACGACGACGCAGACAGAAACCTGGCAGTCTCCGGGGGCATCAGCTTCTaGATGTATTCCGGCTGGTTG +
Preference number: 4 (lower is better)
Translates to: ALPSNPSDDDADRNLAVSGGISF*MYSGWL
Trigger: CAACCAGCCGGAATACATCCAGAAGCTGATGCCCCC...GGAGACTGCCAGGTTTCTGTCTGCGTCGTCGTCGGAGGGATTACTGGGGAGTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000592287.5
CDS-3UTR CCA 90 bp GGTGACCTCTGGCCAGCCCCAGCCACTCCAGTGGTTCTCACCCTGCGAGCTAGGATACAGGGCTTGACATaGATGAAGCAGGCTTTGGTG +
Preference number: 4 (lower is better)
Translates to: GDLWPAPATPVVLTLRARIQGLT*MKQALV
Trigger: CACCAAAGCCTGCTTCATCCATGTCAAGCCCTGTAT...CCTAGCTCGCAGGGTGAGAACCACTGGAGTGGCTGGGGCTGGCCAGAGGTCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR CCA 90 bp GCAGCGCACTCCCCAGTAATCCCTCCGACGACGACGCAGACAGAAACCTGGCAGTGCAGATTTCACCAATaGCCCAGGTGGCGTTGTTGC +
Preference number: 4 (lower is better)
Translates to: AAHSPVIPPTTTQTETWQCRFHQ*PRWRCC
Trigger: GCAACAACGCCACCTGGGCCATTGGTGAAATCTGCA...CTGCCAGGTTTCTGTCTGCGTCGTCGTCGGAGGGATTACTGGGGAGTGCGCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000592287.5
CDS-3UTR CCA 90 bp ACTATGATGAGCAGGAAGTCCCAGGGAGATGGAATAGGGAACAGGGGACACACCCAGTCGGGGAAATGGTaGAGCGGCTGGCCCAGCCTC +
Preference number: 4 (lower is better)
Translates to: TMMSRKSQGDGIGNRGHTQSGKW*SGWPSL
Trigger: GAGGCTGGGCCAGCCGCTCCACCATTTCCCCGACTG...GGTGTGTCCCCTGTTCCCTATTCCATCTCCCTGGGACTTCCTGCTCATCATAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR CCA 90 bp CTCCCCAGTAATCCCTCCGACGACGACGCAGACAGAAACCTGGCAGTCTCCATGCAGCACAGTAACAAATaGACAGACCCGGGAGCCCGC +
Preference number: 4 (lower is better)
Translates to: LPSNPSDDDADRNLAVSMQHSNK*TDPGAR
Trigger: GCGGGCTCCCGGGTCTGTCCATTTGTTACTGTGCTG...CATGGAGACTGCCAGGTTTCTGTCTGCGTCGTCGTCGGAGGGATTACTGGGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356861.9
CDS-3UTR CCA 90 bp ACGGACGGACGGACGGGGAAGGCATCTGGATTTGAGTCCCACTCACTCCTCCCTGCCCTTCAAGCTCAGTaGATGCCAGATATCCCCCTC +
Preference number: 4 (lower is better)
Translates to: TDGRTGKASGFESHSLLPALQAQ*MPDIPL
Trigger: GAGGGGGATATCTGGCATCCACTGAGCTTGAAGGGC...AGGGAGGAGTGAGTGGGACTCAAATCCAGATGCCTTCCCCGTCCGTCCGTCCGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000450764.6
CDS-3UTR CCA 90 bp AGATCCAGTGCTACGATCATGAAGTCCTTGTCGGGAGCCTCATACTGCTCAGGGCCCGGCTGGTTGAGGTaGTGGCCTACAGAGTCGGCC +
Preference number: 4 (lower is better)
Translates to: RSSATIMKSLSGASYCSGPGWLR*WPTESA
Trigger: GGCCGACTCTGTAGGCCACCACCTCAACCAGCCGGG...CCCTGAGCAGTATGAGGCTCCCGACAAGGACTTCATGATCGTAGCACTGGATCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589572.5
CDS-3UTR CCA 90 bp CAGACACTCCAGCAGGGGGAAGAGGTCCTTGTCTTCGTCCTTGAGCTCATTCCAGAAATGGGCGCTCCCTaGGTCGGGGTGGCAGACTGT +
Preference number: 4 (lower is better)
Translates to: QTLQQGEEVLVFVLELIPEMGAP*VGVADC
Trigger: ACAGTCTGCCACCCCGACCCAGGGAGCGCCCATTTC...TGGAATGAGCTCAAGGACGAAGACAAGGACCTCTTCCCCCTGCTGGAGTGTCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000588491.1
CDS-3UTR TCA 90 bp GGATGCAGCGCACTCCCCAGTAATCCCTCCGACGACGACGCAGACAGAAACCTGCGTTGGCTCATCTTCTaGCTTGAGTCTGGTCAGGAC +
Preference number: 4 (lower is better)
Translates to: GCSALPSNPSDDDADRNLRWLIF*LESGQD
Trigger: GTCCTGACCAGACTCAAGTCAGAAGATGAGCCAACG...CAGGTTTCTGTCTGCGTCGTCGTCGGAGGGATTACTGGGGAGTGCGCTGCATCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000592287.5
CDS-3UTR TCA 90 bp GGATGCAGCGCACTCCCCAGTAATCCCTCCGACGACGACGCAGACAGAAACCTGTGGGACTGCAGTGCTTaGAGAACTGCAGGAACTTGG +
Preference number: 4 (lower is better)
Translates to: GCSALPSNPSDDDADRNLWDCSA*RTAGTW
Trigger: CCAAGTTCCTGCAGTTCTTCAAGCACTGCAGTCCCA...CAGGTTTCTGTCTGCGTCGTCGTCGGAGGGATTACTGGGGAGTGCGCTGCATCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000592287.5
CDS-3UTR TCA 90 bp CAGTGCTACGATCATGAAGTCCTTGTCGGGAGCCTCATACTGCTCAGGGTGCTGCTGTCATCAGGGGCTTaGGGTGCATGTCGGGTGGCT +
Preference number: 4 (lower is better)
Translates to: QCYDHEVLVGSLILLRVLLSSGA*GACRVA
Trigger: AGCCACCCGACATGCACCTCAAGCCCCTGATGACAG...CAGCACCCTGAGCAGTATGAGGCTCCCGACAAGGACTTCATGATCGTAGCACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588491.1
CDS-3UTR TCA 90 bp TGCAGCGCACTCCCCAGTAATCCCTCCGACGACGACGCAGACAGAAACCTGGCATGGCGTCATAGAGGATaGGCAGGTTCTTGTGCTGGT +
Preference number: 4 (lower is better)
Translates to: CSALPSNPSDDDADRNLAWRHRG*AGSCAG
Trigger: ACCAGCACAAGAACCTGCTCATCCTCTATGACGCCA...TGCCAGGTTTCTGTCTGCGTCGTCGTCGGAGGGATTACTGGGGAGTGCGCTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000592287.5
CDS-3UTR TCA 90 bp TCCGGATGCAGCGCACTCCCCAGTAATCCCTCCGACGACGACGCAGACAGAAACTGGCGTCATAGAGGATaGGCAGGTTCTTGTGCTGGT +
Preference number: 4 (lower is better)
Translates to: SGCSALPSNPSDDDADRNWRHRG*AGSCAG
Trigger: ACCAGCACAAGAACCTGCTCATCCTCTATGACGCCA...GTTTCTGTCTGCGTCGTCGTCGGAGGGATTACTGGGGAGTGCGCTGCATCCGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000592287.5
CDS-3UTR TCA 90 bp GGATGGAGCAGGCCCCAGGATGCGAGACTCCAGTCAGACTCCAAAACACAAGGGTGTATTCCGGCTGGTTaGGGTGGTGGCCTACAGAGT +
Preference number: 4 (lower is better)
Translates to: GWSRPQDARLQSDSKTQGCIPAG*GGGLQS
Trigger: ACTCTGTAGGCCACCACCTCAACCAGCCGGAATACA...CCCTTGTGTTTTGGAGTCTGACTGGAGTCTCGCATCCTGGGGCCTGCTCCATCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR TCA 90 bp CTGCACCAGGGTGACACAGCGCTGGTAGACGGGCTCACAGTAAGGCAGGAAGCCCCTTGTCTTCGTCCTTaGGCTCATTCCACTTCTGGA +
Preference number: 4 (lower is better)
Translates to: LHQGDTALVDGLTVRQEAPCLRP*AHSTSG
Trigger: TCCAGAAGTGGAATGAGCTCAAGGACGAAGACAAGG...GGCTTCCTGCCTTACTGTGAGCCCGTCTACCAGCGCTGTGTCACCCTGGTGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000588491.1
ENST00000589572.5
CDS-3UTR TCA 90 bp ACAGCGACTTCCGGATGCAGCGCACTCCCCAGTAATCCCTCCGACGACGACGCACCTTGTCTTCGTCCTTaGGCTCATTCCACTTCTGGA +
Preference number: 4 (lower is better)
Translates to: TATSGCSALPSNPSDDDAPCLRP*AHSTSG
Trigger: TCCAGAAGTGGAATGAGCTCAAGGACGAAGACAAGG...TGCGTCGTCGTCGGAGGGATTACTGGGGAGTGCGCTGCATCCGGAAGTCGCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000592287.5
CDS-3UTR TCA 90 bp TCCAGTGCTACGATCATGAAGTCCTTGTCGGGAGCCTCATACTGCTCAGGGTGCTCTTCTGCACCAGGGTaGCACAGCGCTGGTAGACGG +
Preference number: 4 (lower is better)
Translates to: SSATIMKSLSGASYCSGCSSAPG*HSAGRR
Trigger: CCGTCTACCAGCGCTGTGTCACCCTGGTGCAGAAGA...GCACCCTGAGCAGTATGAGGCTCCCGACAAGGACTTCATGATCGTAGCACTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588491.1
ENST00000589572.5
CDS-3UTR TCA 90 bp GGATGGAGCAGGCCCCAGGATGCGAGACTCCAGTCAGACTCCAAAACACAAGGGGGAACAGCAATGTCATaGTGTTGCTGCGGGCCACCA +
Preference number: 4 (lower is better)
Translates to: GWSRPQDARLQSDSKTQGGTAMS*CCCGPP
Trigger: TGGTGGCCCGCAGCAACATCATGACATTGCTGTTCC...CCCTTGTGTTTTGGAGTCTGACTGGAGTCTCGCATCCTGGGGCCTGCTCCATCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR TCA 90 bp GGATGCAGCGCACTCCCCAGTAATCCCTCCGACGACGACGCAGACAGAAACCTGTGTTGCAGACGGAGATaGACTCTGGGTTCAGGTTGG +
Preference number: 4 (lower is better)
Translates to: GCSALPSNPSDDDADRNLCCRRR*TLGSGW
Trigger: CCAACCTGAACCCAGAGTTCATCTCCGTCTGCAACA...CAGGTTTCTGTCTGCGTCGTCGTCGGAGGGATTACTGGGGAGTGCGCTGCATCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000592287.5
CDS-3UTR TCA 90 bp AGGGCACAGCGACTTCCGGATGCAGCGCACTCCCCAGTAATCCCTCCGACGACGTTTCCACCAGGTTGTTaGGGACCATCTGCACATAAG +
Preference number: 4 (lower is better)
Translates to: RAQRLPDAAHSPVIPPTTFPPGC*GPSAHK
Trigger: CTTATGTGCAGATGGTCCTCAACAACCTGGTGGAAA...CGTCGTCGGAGGGATTACTGGGGAGTGCGCTGCATCCGGAAGTCGCTGTGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000592287.5
CDS-3UTR TCA 90 bp AGGGCACAGCGACTTCCGGATGCAGCGCACTCCCCAGTAATCCCTCCGACGACGCCCCAACTTGGTCTTTaGAGCCGTGGAGAATCTTAT +
Preference number: 4 (lower is better)
Translates to: RAQRLPDAAHSPVIPPTTPQLGL*SRGESY
Trigger: ATAAGATTCTCCACGGCTTCAAAGACCAAGTTGGGG...CGTCGTCGGAGGGATTACTGGGGAGTGCGCTGCATCCGGAAGTCGCTGTGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000589149.5
ENST00000592287.5
CDS-3UTR TCA 90 bp GCACTCCCCAGTAATCCCTCCGACGACGACGCAGACAGAAACCTGGCAGTCTCCACCTGGCAGTCTCCATaGTCACCTAGACCCCATAGA +
Preference number: 4 (lower is better)
Translates to: ALPSNPSDDDADRNLAVSTWQSP*SPRPHR
Trigger: TCTATGGGGTCTAGGTGATCATGGAGACTGCCAGGT...GGAGACTGCCAGGTTTCTGTCTGCGTCGTCGTCGGAGGGATTACTGGGGAGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000589149.5
ENST00000592287.5
CDS-3UTR TCA 90 bp GACGGACGGACGGGGAAGGCATCTGGATTTGAGTCCCACTCACTCCTCCCTAACGAAGGCATCTGGATTTaGGTCCCACTCACTCCTCCC +
Preference number: 4 (lower is better)
Translates to: DGRTGKASGFESHSLLPNEGIWI*VPLTPP
Trigger: GGGAGGAGTGAGTGGGACTCAAATCCAGATGCCTTC...GTTAGGGAGGAGTGAGTGGGACTCAAATCCAGATGCCTTCCCCGTCCGTCCGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000589149.5
CDS-3UTR TCA 90 bp ACGGACGGACGGACGGGGAAGGCATCTGGATTTGAGTCCCACTCACTCCTCCCTGAGCCCCTTCCACCTTaGCCATGTTCCCAGACTATT +
Preference number: 4 (lower is better)
Translates to: TDGRTGKASGFESHSLLPEPLPP*PCSQTI
Trigger: AATAGTCTGGGAACATGGTCAAGGTGGAAGGGGCTC...AGGGAGGAGTGAGTGGGACTCAAATCCAGATGCCTTCCCCGTCCGTCCGTCCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR TCA 90 bp CTCCCCAGTAATCCCTCCGACGACGACGCAGACAGAAACCTGGCAGTCTCCATGCCAAGACGATCGTCCTaGTCTCTCCTGTCCCCTGTT +
Preference number: 4 (lower is better)
Translates to: LPSNPSDDDADRNLAVSMPRRSS*SLLSPV
Trigger: AACAGGGGACAGGAGAGATCAGGACGATCGTCTTGG...CATGGAGACTGCCAGGTTTCTGTCTGCGTCGTCGTCGGAGGGATTACTGGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450764.6
CDS-3UTR TCA 90 bp AGATCCAGTGCTACGATCATGAAGTCCTTGTCGGGAGCCTCATACTGCTCAGGGCACGTCCCGGCTGGTTaGGGTGGTGGCCTACAGAGT +
Preference number: 4 (lower is better)
Translates to: RSSATIMKSLSGASYCSGHVPAG*GGGLQS
Trigger: ACTCTGTAGGCCACCACCTCAACCAGCCGGGACGTG...CCCTGAGCAGTATGAGGCTCCCGACAAGGACTTCATGATCGTAGCACTGGATCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589572.5
CDS-3UTR GCA 90 bp AGGATCTCTGGGCTCACTGGGTACTATGATGAGCAGGAAGTCCCAGGGAGATGGAGCTCGGGCCACATCTaGAGCTCACCCTTGGAAGCG +
Preference number: 4 (lower is better)
Translates to: RISGLTGYYDEQEVPGRWSSGHI*SSPLEA
Trigger: CGCTTCCAAGGGTGAGCTGCAGATGTGGCCCGAGCT...CCATCTCCCTGGGACTTCCTGCTCATCATAGTACCCAGTGAGCCCAGAGATCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR GCA 90 bp GGCACAGCGACTTCCGGATGCAGCGCACTCCCCAGTAATCCCTCCGACGACGACATCTTGGGACTGCAGTaGTTGAAGAACTGCAGGAAC +
Preference number: 4 (lower is better)
Translates to: GTATSGCSALPSNPSDDDILGLQ*LKNCRN
Trigger: GTTCCTGCAGTTCTTCAAGCACTGCAGTCCCAAGAT...GTCGTCGTCGGAGGGATTACTGGGGAGTGCGCTGCATCCGGAAGTCGCTGTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000592287.5
CDS-3UTR GCA 90 bp GGCACAGCGACTTCCGGATGCAGCGCACTCCCCAGTAATCCCTCCGACGACGACGCCAGGGCAAATAGGTaGTCGATGAAGGTGTCAATA +
Preference number: 4 (lower is better)
Translates to: GTATSGCSALPSNPSDDDARANR*SMKVSI
Trigger: TATTGACACCTTCATCGAGCACCTATTTGCCCTGGC...GTCGTCGTCGGAGGGATTACTGGGGAGTGCGCTGCATCCGGAAGTCGCTGTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000592287.5
CDS-3UTR GCA 90 bp TCCGGATGCAGCGCACTCCCCAGTAATCCCTCCGACGACGACGCAGACAGAAACTACTGGATGATGCTGTaGATGTGGGGGATGAGCCTG +
Preference number: 4 (lower is better)
Translates to: SGCSALPSNPSDDDADRNYWMML*MWGMSL
Trigger: CAGGCTCATCCCCCACATGCACAGCATCATCCAGTA...GTTTCTGTCTGCGTCGTCGTCGGAGGGATTACTGGGGAGTGCGCTGCATCCGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000592287.5
CDS-3UTR GCA 90 bp ACCTCAGGCATCGAGTCCTGCATGCACTGGAACAGCAATGTCATGATGTTGCTGAGGGCACCAGCTCCGTaGAGGCCTCTTCCTCCAGGG +
Preference number: 4 (lower is better)
Translates to: TSGIESCMHWNSNVMMLLRAPAP*RPLPPG
Trigger: CCCTGGAGGAAGAGGCCTGCACGGAGCTGGTGCCCT...CAGCAACATCATGACATTGCTGTTCCAGTGCATGCAGGACTCGATGCCTGAGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588491.1
CDS-3UTR GCA 90 bp AAGTTCTACACAAGTGGAATCTCACGCCACCTCGGCGCCAATCCCCAGCACAGCCAGAGTCGGCCAGGGTaGCAATGGCGTCATAGAGGA +
Preference number: 4 (lower is better)
Translates to: KFYTSGISRHLGANPQHSQSRPG*QWRHRG
Trigger: TCCTCTATGACGCCATTGGCACCCTGGCCGACTCTG...GCTGTGCTGGGGATTGGCGCCGAGGTGGCGTGAGATTCCACTTGTGTAGAACTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356861.9
CDS-3UTR GCA 90 bp AAGGAGCTCTGCCGGACCTCAGGCATCGAGTCCTGCATGCACTGGAACAGCAATCAGAGTCGGCCAGGGTaGCAATGGCGTCATAGAGGA +
Preference number: 4 (lower is better)
Translates to: KELCRTSGIESCMHWNSNQSRPG*QWRHRG
Trigger: TCCTCTATGACGCCATTGGCACCCTGGCCGACTCTG...ATTGCTGTTCCAGTGCATGCAGGACTCGATGCCTGAGGTCCGGCAGAGCTCCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588491.1
ENST00000589572.5
CDS-3UTR GCA 90 bp GACGGACGGGGAAGGCATCTGGATTTGAGTCCCACTCACTCCTCCCTAACCCCCTCATACTGCTCAGGGTaGTGGGTGTACATCATGGCC +
Preference number: 4 (lower is better)
Translates to: DGRGRHLDLSPTHSSLTPSYCSG*WVYIMA
Trigger: GGCCATGATGTACACCCAGCACCCTGAGCAGTATGA...GGGGGTTAGGGAGGAGTGAGTGGGACTCAAATCCAGATGCCTTCCCCGTCCGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR GCA 90 bp TCCGGATGCAGCGCACTCCCCAGTAATCCCTCCGACGACGACGCAGACAGAAACTCATACTGCTCAGGGTaGTGGGTGTACATCATGGCC +
Preference number: 4 (lower is better)
Translates to: SGCSALPSNPSDDDADRNSYCSG*WVYIMA
Trigger: GGCCATGATGTACACCCAGCACCCTGAGCAGTATGA...GTTTCTGTCTGCGTCGTCGTCGGAGGGATTACTGGGGAGTGCGCTGCATCCGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000592287.5
CDS-3UTR GCA 90 bp GGCACAGCGACTTCCGGATGCAGCGCACTCCCCAGTAATCCCTCCGACGACGACGCTGAGCAGATCCAGTaGTACGATCATGAAGTCCTT +
Preference number: 4 (lower is better)
Translates to: GTATSGCSALPSNPSDDDAEQIQ*YDHEVL
Trigger: AAGGACTTCATGATCGTAGCACTGGATCTGCTCAGC...GTCGTCGTCGGAGGGATTACTGGGGAGTGCGCTGCATCCGGAAGTCGCTGTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000592287.5
CDS-3UTR GCA 90 bp GTGGGTCCCAAGCATGTGCGTGCTGACAGGGCGACTCCCAAGGTCACCATCCTCGCATCGAGTCCTGCATaGACTGGAACAGCAATGTCA +
Preference number: 4 (lower is better)
Translates to: VGPKHVRADRATPKVTILASSPA*TGTAMS
Trigger: TGACATTGCTGTTCCAGTGCATGCAGGACTCGATGC...GAGGATGGTGACCTTGGGAGTCGCCCTGTCAGCACGCACATGCTTGGGACCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR GCA 90 bp GCACTCCCCAGTAATCCCTCCGACGACGACGCAGACAGAAACCTGGCAGTCTCCAATGCTAAGGGGGTCTaGAAGGCCCAGTTTTCTGGC +
Preference number: 4 (lower is better)
Translates to: ALPSNPSDDDADRNLAVSNAKGV*KAQFSG
Trigger: GCCAGAAAACTGGGCCTTGCAGACCCCCTTAGCATT...GGAGACTGCCAGGTTTCTGTCTGCGTCGTCGTCGGAGGGATTACTGGGGAGTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR CCA 90 bp CTCCCCAGTAATCCCTCCGACGACGACGCAGACAGAAACCTGGCAGTCTCCATGGCAACGTTCTCATCATaGTCCTGGGTCCTCTGCAGC +
Preference number: 4 (lower is better)
Translates to: LPSNPSDDDADRNLAVSMATFSS*SWVLCS
Trigger: GCTGCAGAGGACCCAGGACCATGATGAGAACGTTGC...CATGGAGACTGCCAGGTTTCTGTCTGCGTCGTCGTCGGAGGGATTACTGGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000592287.5
CDS-3UTR CCA 90 bp CTCCCCAGTAATCCCTCCGACGACGACGCAGACAGAAACCTGGCAGTCTCCATGAAGATGGGGATCAACTaGACCAGATGGGAGGCCAGG +
Preference number: 4 (lower is better)
Translates to: LPSNPSDDDADRNLAVSMKMGIN*TRWEAR
Trigger: CCTGGCCTCCCATCTGGTCCAGTTGATCCCCATCTT...CATGGAGACTGCCAGGTTTCTGTCTGCGTCGTCGTCGGAGGGATTACTGGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000592287.5
CDS-3UTR CCA 90 bp GGACGGATGGACGGACGGACGGACGGACGGGGAAGGCATCTGGATTTGAGTCCCTCCCATTCACCAAGATaGGGATCAACTGGACCAGAT +
Preference number: 4 (lower is better)
Translates to: GRMDGRTDGRGRHLDLSPSHSPR*GSTGPD
Trigger: ATCTGGTCCAGTTGATCCCCATCTTGGTGAATGGGA...GGGACTCAAATCCAGATGCCTTCCCCGTCCGTCCGTCCGTCCGTCCATCCGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR CCA 90 bp AGTAGGATCTCTGGGCTCACTGGGTACTATGATGAGCAGGAAGTCCCAGGGAGAGGCTGGTTGAGGTGGTaGCCTACAGAGTCGGCCAGG +
Preference number: 4 (lower is better)
Translates to: SRISGLTGYYDEQEVPGRGWLRW*PTESAR
Trigger: CCTGGCCGACTCTGTAGGCCACCACCTCAACCAGCC...TCTCCCTGGGACTTCCTGCTCATCATAGTACCCAGTGAGCCCAGAGATCCTACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR CCA 90 bp GACGGACGGACGGGGAAGGCATCTGGATTTGAGTCCCACTCACTCCTCCCTAACGGGGGCATCAGCTTCTaGATGTATTCCGGCTGGTTG +
Preference number: 4 (lower is better)
Translates to: DGRTGKASGFESHSLLPNGGISF*MYSGWL
Trigger: CAACCAGCCGGAATACATCCAGAAGCTGATGCCCCC...GTTAGGGAGGAGTGAGTGGGACTCAAATCCAGATGCCTTCCCCGTCCGTCCGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR CCA 90 bp GGATGCAGCGCACTCCCCAGTAATCCCTCCGACGACGACGCAGACAGAAACCTGAGCTCATTCCACTTCTaGATCAGTGGGGGCATCAGC +
Preference number: 4 (lower is better)
Translates to: GCSALPSNPSDDDADRNLSSFHF*ISGGIS
Trigger: GCTGATGCCCCCACTGATCCAGAAGTGGAATGAGCT...CAGGTTTCTGTCTGCGTCGTCGTCGGAGGGATTACTGGGGAGTGCGCTGCATCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000592287.5
CDS-3UTR CCA 90 bp GGATGCAGCGCACTCCCCAGTAATCCCTCCGACGACGACGCAGACAGAAACCTGGCTGGGTGTACATCATaGCCTGAGCCAGTGTCTTCT +
Preference number: 4 (lower is better)
Translates to: GCSALPSNPSDDDADRNLAGCTS*PEPVSS
Trigger: AGAAGACACTGGCTCAGGCCATGATGTACACCCAGC...CAGGTTTCTGTCTGCGTCGTCGTCGGAGGGATTACTGGGGAGTGCGCTGCATCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000592287.5
CDS-3UTR CCA 90 bp AGGCCCTCGGCCAGGCCGCTGAGCAGATCCAGTGCTACGATCATGAAGTCCTTGGCTGGGTGTACATCATaGCCTGAGCCAGTGTCTTCT +
Preference number: 4 (lower is better)
Translates to: RPSARPLSRSSATIMKSLAGCTS*PEPVSS
Trigger: AGAAGACACTGGCTCAGGCCATGATGTACACCCAGC...CAAGGACTTCATGATCGTAGCACTGGATCTGCTCAGCGGCCTGGCCGAGGGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588491.1
ENST00000589572.5
CDS-3UTR CCA 90 bp TCCGGATGCAGCGCACTCCCCAGTAATCCCTCCGACGACGACGCAGACAGAAACGCTGGGTGTACATCATaGCCTGAGCCAGTGTCTTCT +
Preference number: 4 (lower is better)
Translates to: SGCSALPSNPSDDDADRNAGCTS*PEPVSS
Trigger: AGAAGACACTGGCTCAGGCCATGATGTACACCCAGC...GTTTCTGTCTGCGTCGTCGTCGGAGGGATTACTGGGGAGTGCGCTGCATCCGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000592287.5
CDS-3UTR CCA 90 bp GGACGGATGGACGGACGGACGGACGGACGGGGAAGGCATCTGGATTTGAGTCCCATACAGGGCTTGACATaGATGAAGCAGGCTTTGGTG +
Preference number: 4 (lower is better)
Translates to: GRMDGRTDGRGRHLDLSPIQGLT*MKQALV
Trigger: CACCAAAGCCTGCTTCATCCATGTCAAGCCCTGTAT...GGGACTCAAATCCAGATGCCTTCCCCGTCCGTCCGTCCGTCCGTCCATCCGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR CCA 90 bp ATGCTCGGGGTAGGTGCCAGTAGCTCTGGCTACACCCAGCTCTCTTCAGGAAAATCGAGTTTCATGGGGTaGGCGTGCAGGGACACCCAG +
Preference number: 4 (lower is better)
Translates to: MLGVGASSSGYTQLSSGKSSFMG*ACRDTQ
Trigger: CTGGGTGTCCCTGCACGCCCACCCCATGAAACTCGA...TTTTCCTGAAGAGAGCTGGGTGTAGCCAGAGCTACTGGCACCTACCCCGAGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR CCA 90 bp CTGACCTGCTCCTCCCTCACCTCATCCGAAGCCGGATTCGGTCAGCTGTGTAATGGGAAAGAGGGACTGTaGCTCAAGGCCAGTCTGGGT +
Preference number: 4 (lower is better)
Translates to: LTCSSLTSSEAGFGQLCNGKEGL*LKASLG
Trigger: ACCCAGACTGGCCTTGAGCCACAGTCCCTCTTTCCC...ATTACACAGCTGACCGAATCCGGCTTCGGATGAGGTGAGGGAGGAGCAGGTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356861.9
CDS-3UTR CCA 90 bp CAGGGCACAGCGACTTCCGGATGCAGCGCACTCCCCAGTAATCCCTCCGACGACAAAGTTCTACACAAGTaGAATCTCACGCCACCTCGG +
Preference number: 4 (lower is better)
Translates to: QGTATSGCSALPSNPSDDKVLHK*NLTPPR
Trigger: CCGAGGTGGCGTGAGATTCCACTTGTGTAGAACTTT...GTCGTCGGAGGGATTACTGGGGAGTGCGCTGCATCCGGAAGTCGCTGTGCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356861.9
CDS-3UTR CCA 90 bp AGCAGATCCAGTGCTACGATCATGAAGTCCTTGTCGGGAGCCTCATACTGCTCACGGCCACGTCCCGGCTaGTTGAGGTGGTGGCCTACA +
Preference number: 4 (lower is better)
Translates to: SRSSATIMKSLSGASYCSRPRPG*LRWWPT
Trigger: TGTAGGCCACCACCTCAACCAGCCGGGACGTGGCCG...TGAGCAGTATGAGGCTCCCGACAAGGACTTCATGATCGTAGCACTGGATCTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589572.5
CDS-3UTR CCA 90 bp AGCAGATCCAGTGCTACGATCATGAAGTCCTTGTCGGGAGCCTCATACTGCTCAAGAGGGAGCACGAAATaGGCGCTCCCTGGGTCGGGG +
Preference number: 4 (lower is better)
Translates to: SRSSATIMKSLSGASYCSRGSTK*ALPGSG
Trigger: CCCCGACCCAGGGAGCGCCCATTTCGTGCTCCCTCT...TGAGCAGTATGAGGCTCCCGACAAGGACTTCATGATCGTAGCACTGGATCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588491.1
3UTR CAA 72 bp CCGCTGAGCAGATCCAGTGCTACGATCATGAAGTCCTaGTCGGGAGCCTCATACTGCTCAGGGTGCTGGGTG +
Preference number: 4 (lower is better)
Translates to: PLSRSSATIMKS*SGASYCSGCWV
Trigger: CACCCAGCACCCTGAGCAGTATGAGGCTCCCGACAAGGACTTCATGATCGTAGCACTGGATCTGCTCAGCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588491.1
ENST00000589572.5
CDS-3UTR TCA 90 bp TTGAGGGCGTCACTGTCCAGAAGCTCTGATGAGTCTTCACAGATCTTCTGCAGGTCCTGCACGATGCGCTaGGTGGCTGTGTTGGGCGAC +
Preference number: 4 (lower is better)
Translates to: LRASLSRSSDESSQIFCRSCTMR*VAVLGD
Trigger: GTCGCCCAACACAGCCACTCAGCGCATCGTGCAGGA...CCTGCAGAAGATCTGTGAAGACTCATCAGAGCTTCTGGACAGTGACGCCCTCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586775.5
ENST00000587654.5
CDS-3UTR TCA 90 bp CCAGAAGCTCTGATGAGTCTTCACAGATCTTCTGCAGGGCTCCAAAGGCTCCCTCAATGGTGGCTCGGATaGGCGAGGAGGCATCGCCAA +
Preference number: 4 (lower is better)
Translates to: PEALMSLHRSSAGLQRLPQWWLG*ARRHRQ
Trigger: TTGGCGATGCCTCCTCGCTCATCCGAGCCACCATTG...AGGGAGCCTTTGGAGCCCTGCAGAAGATCTGTGAAGACTCATCAGAGCTTCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586775.5
ENST00000587654.5
CDS-3UTR TCA 90 bp CGCACCTCGGGGTCATCATCCACAGCCAGGGCAAATAGGTGCTCGATGAAGGTGTGGGACTGCAGTGCTTaGAGAACTGCAGGAACTTGG +
Preference number: 4 (lower is better)
Translates to: RTSGSSSTARANRCSMKVWDCSA*RTAGTW
Trigger: CCAAGTTCCTGCAGTTCTTCAAGCACTGCAGTCCCA...CACCTTCATCGAGCACCTATTTGCCCTGGCTGTGGATGATGACCCCGAGGTGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586775.5
CDS-3UTR TCA 90 bp AAGTTCTACACAAGTGGAATCTCACGCCACCTCGGCGCCAATCCCCAGCACAGCGCAGCATGTACTGGATaGTGCTGTGCATGTGGGGGA +
Preference number: 4 (lower is better)
Translates to: KFYTSGISRHLGANPQHSAACTG*CCACGG
Trigger: TCCCCCACATGCACAGCATCATCCAGTACATGCTGC...GCTGTGCTGGGGATTGGCGCCGAGGTGGCGTGAGATTCCACTTGTGTAGAACTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356861.9
CDS-3UTR TCA 90 bp GAACAGCAATGTCATGATGTTGCTGCGGGCCACCAGCTGCTCCACGTGACCACCTGGCGTCATAGAGGATaGGCAGGTTCTTGTGCTGGT +
Preference number: 4 (lower is better)
Translates to: EQQCHDVAAGHQLLHVTTWRHRG*AGSCAG
Trigger: ACCAGCACAAGAACCTGCTCATCCTCTATGACGCCA...GGTGGTCACGTGGAGCAGCTGGTGGCCCGCAGCAACATCATGACATTGCTGTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588491.1
ENST00000589572.5
CDS-3UTR TCA 90 bp TTGACCATGTTCCCAGACTATTCCGGAAGGTTCTCTAGAATTGCTGACCCAGTCGGCGGTGGCCACCGATaGCAGACACTCCAGCAGGGG +
Preference number: 4 (lower is better)
Translates to: LTMFPDYSGRFSRIADPVGGGHR*QTLQQG
Trigger: CCCCTGCTGGAGTGTCTGTCATCGGTGGCCACCGCC...GACTGGGTCAGCAATTCTAGAGAACCTTCCGGAATAGTCTGGGAACATGGTCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR TCA 90 bp AAGTTCTACACAAGTGGAATCTCACGCCACCTCGGCGCCAATCCCCAGCACAGCGTGTACATCATGGCCTaGGCCAGTGTCTTCTGCACC +
Preference number: 4 (lower is better)
Translates to: KFYTSGISRHLGANPQHSVYIMA*ASVFCT
Trigger: GGTGCAGAAGACACTGGCTCAGGCCATGATGTACAC...GCTGTGCTGGGGATTGGCGCCGAGGTGGCGTGAGATTCCACTTGTGTAGAACTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356861.9
CDS-3UTR TCA 90 bp AGGCCGCTGAGCAGATCCAGTGCTACGATCATGAAGTCCTTGTCGGGAGCCTCAGTGTACATCATGGCCTaGGCCAGTGTCTTCTGCACC +
Preference number: 4 (lower is better)
Translates to: RPLSRSSATIMKSLSGASVYIMA*ASVFCT
Trigger: GGTGCAGAAGACACTGGCTCAGGCCATGATGTACAC...TGAGGCTCCCGACAAGGACTTCATGATCGTAGCACTGGATCTGCTCAGCGGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588491.1
ENST00000589572.5
CDS-3UTR TCA 90 bp TGTGTAATTCCTCCCTCCCACGTAGCTGGCCCAAGTGGGCTGCCAGAGATGACCTGTTGCAGACGGAGATaGACTCTGGGTTCAGGTTGG +
Preference number: 4 (lower is better)
Translates to: CVIPPSHVAGPSGLPEMTCCRRR*TLGSGW
Trigger: CCAACCTGAACCCAGAGTTCATCTCCGTCTGCAACA...GGTCATCTCTGGCAGCCCACTTGGGCCAGCTACGTGGGAGGGAGGAATTACACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR TCA 90 bp GCAGCGCACTCCCCAGTAATCCCTCCGACGACGACGCAGACAGAAACCTGGCAGTTTCCACCAGGTTGTTaGGGACCATCTGCACATAAG +
Preference number: 4 (lower is better)
Translates to: AAHSPVIPPTTTQTETWQFPPGC*GPSAHK
Trigger: CTTATGTGCAGATGGTCCTCAACAACCTGGTGGAAA...CTGCCAGGTTTCTGTCTGCGTCGTCGTCGGAGGGATTACTGGGGAGTGCGCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000592287.5
CDS-3UTR TCA 90 bp CTCTCTTCAGGAAAAAGGTCCCAACCCAGTGTCTTCAAAAGCCACTGGAGCACACCGCCAGCCTCTCCTTaGGCAGCGGCGGGAATTGCT +
Preference number: 4 (lower is better)
Translates to: LSSGKRSQPSVFKSHWSTPPASP*AAAGIA
Trigger: AGCAATTCCCGCCGCTGCTCAAGGAGAGGCTGGCGG...TGTGCTCCAGTGGCTTTTGAAGACACTGGGTTGGGACCTTTTTCCTGAAGAGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR TCA 90 bp CACTCCCCAGTAATCCCTCCGACGACGACGCAGACAGAAACCTGGCAGTCTCCAACCTGGCAGTCTCCATaGTCACCTAGACCCCATAGA +
Preference number: 4 (lower is better)
Translates to: HSPVIPPTTTQTETWQSPTWQSP*SPRPHR
Trigger: TCTATGGGGTCTAGGTGATCATGGAGACTGCCAGGT...TGGAGACTGCCAGGTTTCTGTCTGCGTCGTCGTCGGAGGGATTACTGGGGAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000589149.5
ENST00000592287.5
CDS-3UTR TCA 90 bp GACGGACGGACGGGGAAGGCATCTGGATTTGAGTCCCACTCACTCCTCCCTAACACCTGGCAGTCTCCATaGTCACCTAGACCCCATAGA +
Preference number: 4 (lower is better)
Translates to: DGRTGKASGFESHSLLPNTWQSP*SPRPHR
Trigger: TCTATGGGGTCTAGGTGATCATGGAGACTGCCAGGT...GTTAGGGAGGAGTGAGTGGGACTCAAATCCAGATGCCTTCCCCGTCCGTCCGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000589149.5
CDS-3UTR TCA 90 bp CCCAGTAATCCCTCCGACGACGACGCAGACAGAAACCTGGCAGTCTCCATGATCGAAACGGACTGCCCCTaGAGCTGCTTACAGAGAGAG +
Preference number: 4 (lower is better)
Translates to: PSNPSDDDADRNLAVSMIETDCP*SCLQRE
Trigger: CTCTCTCTGTAAGCAGCTTCAGGGGCAGTCCGTTTC...GATCATGGAGACTGCCAGGTTTCTGTCTGCGTCGTCGTCGGAGGGATTACTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR GCA 90 bp GTAATCCTCCGAGTTAAGCAGGTTGCAGAGCTGGGGCAGCAGCTCGGGCCACATGTTTATCCTGCACGATaGGCTGAGTGGCTGTGTTGG +
Preference number: 4 (lower is better)
Translates to: VILRVKQVAELGQQLGPHVYPAR*AEWLCW
Trigger: CCAACACAGCCACTCAGCGCATCGTGCAGGATAAAC...ATGTGGCCCGAGCTGCTGCCCCAGCTCTGCAACCTGCTTAACTCGGAGGATTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586775.5
ENST00000587654.5
CDS-3UTR GCA 90 bp GGATGGAGCAGGCCCCAGGATGCGAGACTCCAGTCAGACTCCAAAACACAAGGGTACTGGATGATGCTGTaGATGTGGGGGATGAGCCTG +
Preference number: 4 (lower is better)
Translates to: GWSRPQDARLQSDSKTQGYWMML*MWGMSL
Trigger: CAGGCTCATCCCCCACATGCACAGCATCATCCAGTA...CCCTTGTGTTTTGGAGTCTGACTGGAGTCTCGCATCCTGGGGCCTGCTCCATCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR GCA 90 bp CACTCCCCAGTAATCCCTCCGACGACGACGCAGACAGAAACCTGGCAGTCTCCATGGTCCTGGGTCCTCTaGAGCATGTACTGGATGATG +
Preference number: 4 (lower is better)
Translates to: HSPVIPPTTTQTETWQSPWSWVL*SMYWMM
Trigger: CATCATCCAGTACATGCTGCAGAGGACCCAGGACCA...TGGAGACTGCCAGGTTTCTGTCTGCGTCGTCGTCGGAGGGATTACTGGGGAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000592287.5
CDS-3UTR GCA 90 bp GCGTGCAGGGACACCCAGCTAATTTATGGAATGTGTACTGAGTGCCCCTTGGAATCCTTGCAGATGGGCTaGTCGGCCAGCGTCAGCCAG +
Preference number: 4 (lower is better)
Translates to: ACRDTQLIYGMCTECPLESLQMG*SASVSQ
Trigger: CTGGCTGACGCTGGCCGAGCAGCCCATCTGCAAGGA...TTCCAAGGGGCACTCAGTACACATTCCATAAATTAGCTGGGTGTCCCTGCACGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR GCA 90 bp ACTATGATGAGCAGGAAGTCCCAGGGAGATGGAATAGGGAACAGGGGACACACCCGTGGCTTGATGTCCTaGTCACTGTCGGGGACAGCC +
Preference number: 4 (lower is better)
Translates to: TMMSRKSQGDGIGNRGHTRGLMS*SLSGTA
Trigger: GGCTGTCCCCGACAGTGAGCAGGACATCAAGCCACG...GGTGTGTCCCCTGTTCCCTATTCCATCTCCCTGGGACTTCCTGCTCATCATAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR GCA 90 bp GCAGCGCACTCCCCAGTAATCCCTCCGACGACGACGCAGACAGAAACCTGGCAGGCTGAGCAGATCCAGTaGTACGATCATGAAGTCCTT +
Preference number: 4 (lower is better)
Translates to: AAHSPVIPPTTTQTETWQAEQIQ*YDHEVL
Trigger: AAGGACTTCATGATCGTAGCACTGGATCTGCTCAGC...CTGCCAGGTTTCTGTCTGCGTCGTCGTCGGAGGGATTACTGGGGAGTGCGCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000592287.5
CDS-3UTR GCA 90 bp GGATGCAGCGCACTCCCCAGTAATCCCTCCGACGACGACGCAGACAGAAACCTGGCATCGAGTCCTGCATaGACTGGAACAGCAATGTCA +
Preference number: 4 (lower is better)
Translates to: GCSALPSNPSDDDADRNLASSPA*TGTAMS
Trigger: TGACATTGCTGTTCCAGTGCATGCAGGACTCGATGC...CAGGTTTCTGTCTGCGTCGTCGTCGGAGGGATTACTGGGGAGTGCGCTGCATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000592287.5
CDS-3UTR GCA 90 bp ACAGCGACTTCCGGATGCAGCGCACTCCCCAGTAATCCCTCCGACGACGACGCAATCTCTGCCCCCATCTaGATGCAGATTTCACCAATG +
Preference number: 4 (lower is better)
Translates to: TATSGCSALPSNPSDDDAISAPI*MQISPM
Trigger: CATTGGTGAAATCTGCATGCAGATGGGGGCAGAGAT...TGCGTCGTCGTCGGAGGGATTACTGGGGAGTGCGCTGCATCCGGAAGTCGCTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000592287.5
CDS-3UTR CCA 90 bp ACCTCGGGGTCATCATCCACAGCCAGGGCAAATAGGTGCTCGATGAAGGTGTCATTGTCCATCAGCGCCTaGGCCCGGTCCATGATGAAC +
Preference number: 4 (lower is better)
Translates to: TSGSSSTARANRCSMKVSLSISA*ARSMMN
Trigger: GTTCATCATGGACCGGGCCCAGGCGCTGATGGACAA...TGACACCTTCATCGAGCACCTATTTGCCCTGGCTGTGGATGATGACCCCGAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586775.5
CDS-3UTR CCA 90 bp ACTTCCGGATGCAGCGCACTCCCCAGTAATCCCTCCGACGACGACGCAGACAGACTCTGCAGCATGTACTaGATGATGCTGTGCATGTGG +
Preference number: 4 (lower is better)
Translates to: TSGCSALPSNPSDDDADRLCSMY*MMLCMW
Trigger: CCACATGCACAGCATCATCCAGTACATGCTGCAGAG...TCTGTCTGCGTCGTCGTCGGAGGGATTACTGGGGAGTGCGCTGCATCCGGAAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000592287.5
CDS-3UTR CCA 90 bp GACGGACGGGGAAGGCATCTGGATTTGAGTCCCACTCACTCCTCCCTAACCCCCTTCTCATCATGGTCCTaGGTCCTCTGCAGCATGTAC +
Preference number: 4 (lower is better)
Translates to: DGRGRHLDLSPTHSSLTPFSSWS*VLCSMY
Trigger: GTACATGCTGCAGAGGACCCAGGACCATGATGAGAA...GGGGGTTAGGGAGGAGTGAGTGGGACTCAAATCCAGATGCCTTCCCCGTCCGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR CCA 90 bp CCGGAAGGTTCTCTAGAATTGCTGACCCAGTCTAGTAGGATCTCTGGGCTCACTTGCAGCCCTCAGCAATaGCGCCCAGCACCAGGATGC +
Preference number: 4 (lower is better)
Translates to: PEGSLELLTQSSRISGLTCSPQQ*RPAPGC
Trigger: GCATCCTGGTGCTGGGCGCCATTGCTGAGGGCTGCA...AGTGAGCCCAGAGATCCTACTAGACTGGGTCAGCAATTCTAGAGAACCTTCCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR CCA 90 bp GGATGGAGCAGGCCCCAGGATGCGAGACTCCAGTCAGACTCCAAAACACAAGGGAGCTCATTCCACTTCTaGATCAGTGGGGGCATCAGC +
Preference number: 4 (lower is better)
Translates to: GWSRPQDARLQSDSKTQGSSFHF*ISGGIS
Trigger: GCTGATGCCCCCACTGATCCAGAAGTGGAATGAGCT...CCCTTGTGTTTTGGAGTCTGACTGGAGTCTCGCATCCTGGGGCCTGCTCCATCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR CCA 90 bp TGTGTAATTCCTCCCTCCCACGTAGCTGGCCCAAGTGGGCTGCCAGAGATGACCGCTGGGTGTACATCATaGCCTGAGCCAGTGTCTTCT +
Preference number: 4 (lower is better)
Translates to: CVIPPSHVAGPSGLPEMTAGCTS*PEPVSS
Trigger: AGAAGACACTGGCTCAGGCCATGATGTACACCCAGC...GGTCATCTCTGGCAGCCCACTTGGGCCAGCTACGTGGGAGGGAGGAATTACACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR CCA 90 bp GGCACAGCGACTTCCGGATGCAGCGCACTCCCCAGTAATCCCTCCGACGACGACTTATCTTCCCCAACTTaGTCTTTGAAGCCGTGGAGA +
Preference number: 4 (lower is better)
Translates to: GTATSGCSALPSNPSDDDLSSPT*SLKPWR
Trigger: TCTCCACGGCTTCAAAGACCAAGTTGGGGAAGATAA...GTCGTCGTCGGAGGGATTACTGGGGAGTGCGCTGCATCCGGAAGTCGCTGTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000589149.5
ENST00000592287.5
CDS-3UTR CCA 90 bp GTGGGTCCCAAGCATGTGCGTGCTGACAGGGCGACTCCCAAGGTCACCATCCTCAGTTTTCTGGCCAACTaGGAAGTAACTACACCCCCA +
Preference number: 4 (lower is better)
Translates to: VGPKHVRADRATPKVTILSFLAN*EVTTPP
Trigger: TGGGGGTGTAGTTACTTCCCAGTTGGCCAGAAAACT...GAGGATGGTGACCTTGGGAGTCGCCCTGTCAGCACGCACATGCTTGGGACCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR CCA 90 bp GCGTGCAGGGACACCCAGCTAATTTATGGAATGTGTACTGAGTGCCCCTTGGAAGACACAGGGCTTGGATaGAGGGTCTGGCGCCCAGGA +
Preference number: 4 (lower is better)
Translates to: ACRDTQLIYGMCTECPLEDTGLG*RVWRPG
Trigger: TCCTGGGCGCCAGACCCTCCATCCAAGCCCTGTGTC...TTCCAAGGGGCACTCAGTACACATTCCATAAATTAGCTGGGTGTCCCTGCACGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR CCA 90 bp TCCAGTGCTACGATCATGAAGTCCTTGTCGGGAGCCTCATACTGCTCAGGGTGCGACTCAGGTACCGGCTaGTTGAGGTGGTGGCCTACA +
Preference number: 4 (lower is better)
Translates to: SSATIMKSLSGASYCSGCDSGTG*LRWWPT
Trigger: TGTAGGCCACCACCTCAACCAGCCGGTACCTGAGTC...GCACCCTGAGCAGTATGAGGCTCCCGACAAGGACTTCATGATCGTAGCACTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588491.1
CDS-3UTR TCA 90 bp ATGTTGAGGGGCCTGTTGAGGGCGTCACTGTCCAGAAGCTCTGATGAGTCTTCAGCGACTGTGAGTCTTTaGGCAGCTGCAGGACCTGCT +
Preference number: 4 (lower is better)
Translates to: MLRGLLRASLSRSSDESSATVSL*AAAGPA
Trigger: AGCAGGTCCTGCAGCTGCTCAAAGACTCACAGTCGC...TGAAGACTCATCAGAGCTTCTGGACAGTGACGCCCTCAACAGGCCCCTCAACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586775.5
ENST00000587654.5
CDS-3UTR TCA 90 bp ACTTCCGGATGCAGCGCACTCCCCAGTAATCCCTCCGACGACGACGCAGACAGAGCTCATCTTCTGACTTaGGTCTGGTCAGGACGAAAA +
Preference number: 4 (lower is better)
Translates to: TSGCSALPSNPSDDDADRAHLLT*VWSGRK
Trigger: TTTTCGTCCTGACCAGACTCAAGTCAGAAGATGAGC...TCTGTCTGCGTCGTCGTCGGAGGGATTACTGGGGAGTGCGCTGCATCCGGAAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000592287.5
CDS-3UTR TCA 90 bp ATCTCTGGGCTCACTGGGTACTATGATGAGCAGGAAGTCCCAGGGAGATGGAATCAATGGTGGCTCGGATaGGCGAGGAGGCATCGCCAA +
Preference number: 4 (lower is better)
Translates to: ISGLTGYYDEQEVPGRWNQWWLG*ARRHRQ
Trigger: TTGGCGATGCCTCCTCGCTCATCCGAGCCACCATTG...ATTCCATCTCCCTGGGACTTCCTGCTCATCATAGTACCCAGTGAGCCCAGAGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR TCA 90 bp GGCACAGCGACTTCCGGATGCAGCGCACTCCCCAGTAATCCCTCCGACGACGACCAAATAGGTGCTCGATaGAGGTGTCAATATTGTCCA +
Preference number: 4 (lower is better)
Translates to: GTATSGCSALPSNPSDDDQIGAR*RCQYCP
Trigger: TGGACAATATTGACACCTTCATCGAGCACCTATTTG...GTCGTCGTCGGAGGGATTACTGGGGAGTGCGCTGCATCCGGAAGTCGCTGTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000592287.5
CDS-3UTR TCA 90 bp CTAAGGGGGTCTGCAAGGCCCAGTTTTCTGGCCAACTGGGAAGTAACTACACCCGTCCAGTGCAGCCGCTaGGCACTTCCTCAAATTCCA +
Preference number: 4 (lower is better)
Translates to: LRGSARPSFLANWEVTTPVQCSR*ALPQIP
Trigger: TGGAATTTGAGGAAGTGCTCAGCGGCTGCACTGGAC...GGGTGTAGTTACTTCCCAGTTGGCCAGAAAACTGGGCCTTGCAGACCCCCTTAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR TCA 90 bp CCATGTTCCCAGACTATTCCGGAAGGTTCTCTAGAATTGCTGACCCAGTCTAGTGGATGCCCGACTCCTTaGCCACCCACTCGGGGTGGA +
Preference number: 4 (lower is better)
Translates to: PCSQTIPEGSLELLTQSSGCPTP*PPTRGG
Trigger: TCCACCCCGAGTGGGTGGTCAAGGAGTCGGGCATCC...ACTAGACTGGGTCAGCAATTCTAGAGAACCTTCCGGAATAGTCTGGGAACATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR TCA 90 bp GCGTGCAGGGACACCCAGCTAATTTATGGAATGTGTACTGAGTGCCCCTTGGAATGCACCAAGGCCGGATaGACTGCTGCAGCATGGGTG +
Preference number: 4 (lower is better)
Translates to: ACRDTQLIYGMCTECPLECTKAG*TAAAWV
Trigger: CACCCATGCTGCAGCAGTTCATCCGGCCTTGGTGCA...TTCCAAGGGGCACTCAGTACACATTCCATAAATTAGCTGGGTGTCCCTGCACGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR TCA 90 bp GCACTCCCCAGTAATCCCTCCGACGACGACGCAGACAGAAACCTGGCAGTCTCCCCCCAACTTGGTCTTTaGAGCCGTGGAGAATCTTAT +
Preference number: 4 (lower is better)
Translates to: ALPSNPSDDDADRNLAVSPQLGL*SRGESY
Trigger: ATAAGATTCTCCACGGCTTCAAAGACCAAGTTGGGG...GGAGACTGCCAGGTTTCTGTCTGCGTCGTCGTCGGAGGGATTACTGGGGAGTGC
56% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000589149.5
ENST00000592287.5
CDS-3UTR TCA 90 bp CCGGAAGGTTCTCTAGAATTGCTGACCCAGTCTAGTAGGATCTCTGGGCTCACTTCCCCGTTTGTAGGATaGGCATGGTGGCCCCACCCA +
Preference number: 4 (lower is better)
Translates to: PEGSLELLTQSSRISGLTSPFVG*AWWPHP
Trigger: TGGGTGGGGCCACCATGCTCATCCTACAAACGGGGA...AGTGAGCCCAGAGATCCTACTAGACTGGGTCAGCAATTCTAGAGAACCTTCCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR TCA 90 bp ACTATGATGAGCAGGAAGTCCCAGGGAGATGGAATAGGGAACAGGGGACACACCCCATGTGTGTCCGTGTaGGTGTACGCGTCCCTACGA +
Preference number: 4 (lower is better)
Translates to: TMMSRKSQGDGIGNRGHTPCVSV*VYASLR
Trigger: TCGTAGGGACGCGTACACTCACACGGACACACATGG...GGTGTGTCCCCTGTTCCCTATTCCATCTCCCTGGGACTTCCTGCTCATCATAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR TCA 90 bp GCGTGCAGGGACACCCAGCTAATTTATGGAATGTGTACTGAGTGCCCCTTGGAAGGAGACACCACCAGCTaGGGCTGCAACAAAGCTGGC +
Preference number: 4 (lower is better)
Translates to: ACRDTQLIYGMCTECPLEGDTTS*GCNKAG
Trigger: GCCAGCTTTGTTGCAGCCTCAGCTGGTGGTGTCTCC...TTCCAAGGGGCACTCAGTACACATTCCATAAATTAGCTGGGTGTCCCTGCACGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR TCA 90 bp AGTAGGATCTCTGGGCTCACTGGGTACTATGATGAGCAGGAAGTCCCAGGGAGACTGGGGCCTGAAACGTaGGAAGGGGGTTTCAGAAGC +
Preference number: 4 (lower is better)
Translates to: SRISGLTGYYDEQEVPGRLGPET*EGGFRS
Trigger: GCTTCTGAAACCCCCTTCTCACGTTTCAGGCCCCAG...TCTCCCTGGGACTTCCTGCTCATCATAGTACCCAGTGAGCCCAGAGATCCTACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR GCA 90 bp GCAGCGCACTCCCCAGTAATCCCTCCGACGACGACGCAGACAGAAACCTGGCAGGAAGCTCTGATAGTGTaGCTTCACGTTGTTCTTGAG +
Preference number: 4 (lower is better)
Translates to: AAHSPVIPPTTTQTETWQEALIV*LHVVLE
Trigger: CTCAAGAACAACGTGAAGGCACACTATCAGAGCTTC...CTGCCAGGTTTCTGTCTGCGTCGTCGTCGGAGGGATTACTGGGGAGTGCGCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000592287.5
CDS-3UTR GCA 90 bp GATGAACTGGTTCACGCAGGCGATGGCGTGGGACCGGATCTTGGGACTGCAGTGATCTTGGGACTGCAGTaGTTGAAGAACTGCAGGAAC +
Preference number: 4 (lower is better)
Translates to: DELVHAGDGVGPDLGTAVILGLQ*LKNCRN
Trigger: GTTCCTGCAGTTCTTCAAGCACTGCAGTCCCAAGAT...CACTGCAGTCCCAAGATCCGGTCCCACGCCATCGCCTGCGTGAACCAGTTCATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586775.5
CDS-3UTR GCA 90 bp TCCGGATGCAGCGCACTCCCCAGTAATCCCTCCGACGACGACGCAGACAGAAACATCTTGGGACTGCAGTaGTTGAAGAACTGCAGGAAC +
Preference number: 4 (lower is better)
Translates to: SGCSALPSNPSDDDADRNILGLQ*LKNCRN
Trigger: GTTCCTGCAGTTCTTCAAGCACTGCAGTCCCAAGAT...GTTTCTGTCTGCGTCGTCGTCGGAGGGATTACTGGGGAGTGCGCTGCATCCGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000592287.5
CDS-3UTR GCA 90 bp ACTTCCGGATGCAGCGCACTCCCCAGTAATCCCTCCGACGACGACGCAGACAGAGCCAGGGCAAATAGGTaGTCGATGAAGGTGTCAATA +
Preference number: 4 (lower is better)
Translates to: TSGCSALPSNPSDDDADRARANR*SMKVSI
Trigger: TATTGACACCTTCATCGAGCACCTATTTGCCCTGGC...TCTGTCTGCGTCGTCGTCGGAGGGATTACTGGGGAGTGCGCTGCATCCGGAAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000592287.5
CDS-3UTR GCA 90 bp CCATGTTCCCAGACTATTCCGGAAGGTTCTCTAGAATTGCTGACCCAGTCTAGTGGCAGGAAGCCACTCTaGAGGGCGGTGGCCACCGAT +
Preference number: 4 (lower is better)
Translates to: PCSQTIPEGSLELLTQSSGRKPL*RAVATD
Trigger: ATCGGTGGCCACCGCCCTGCAGAGTGGCTTCCTGCC...ACTAGACTGGGTCAGCAATTCTAGAGAACCTTCCGGAATAGTCTGGGAACATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR GCA 90 bp AGTAGGATCTCTGGGCTCACTGGGTACTATGATGAGCAGGAAGTCCCAGGGAGATCGGGAGCCTCATACTaGTCAGGGTGCTGGGTGTAC +
Preference number: 4 (lower is better)
Translates to: SRISGLTGYYDEQEVPGRSGASY*SGCWVY
Trigger: GTACACCCAGCACCCTGAGCAGTATGAGGCTCCCGA...TCTCCCTGGGACTTCCTGCTCATCATAGTACCCAGTGAGCCCAGAGATCCTACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR GCA 90 bp GACGGACGGGGAAGGCATCTGGATTTGAGTCCCACTCACTCCTCCCTAACCCCCGCTGAGCAGATCCAGTaGTACGATCATGAAGTCCTT +
Preference number: 4 (lower is better)
Translates to: DGRGRHLDLSPTHSSLTPAEQIQ*YDHEVL
Trigger: AAGGACTTCATGATCGTAGCACTGGATCTGCTCAGC...GGGGGTTAGGGAGGAGTGAGTGGGACTCAAATCCAGATGCCTTCCCCGTCCGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR GCA 90 bp GGATGCAGCGCACTCCCCAGTAATCCCTCCGACGACGACGCAGACAGAAACCTGATCTCTGCCCCCATCTaGATGCAGATTTCACCAATG +
Preference number: 4 (lower is better)
Translates to: GCSALPSNPSDDDADRNLISAPI*MQISPM
Trigger: CATTGGTGAAATCTGCATGCAGATGGGGGCAGAGAT...CAGGTTTCTGTCTGCGTCGTCGTCGGAGGGATTACTGGGGAGTGCGCTGCATCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000592287.5
CDS-3UTR GCA 90 bp CTCTCTTCAGGAAAAAGGTCCCAACCCAGTGTCTTCAAAAGCCACTGGAGCACAGGCCGGATGAACTGCTaGAGCATGGGTGCCACCTCC +
Preference number: 4 (lower is better)
Translates to: LSSGKRSQPSVFKSHWSTGRMNC*SMGATS
Trigger: GGAGGTGGCACCCATGCTGCAGCAGTTCATCCGGCC...TGTGCTCCAGTGGCTTTTGAAGACACTGGGTTGGGACCTTTTTCCTGAAGAGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR GCA 90 bp TCCGGATGCAGCGCACTCCCCAGTAATCCCTCCGACGACGACGCAGACAGAAACTGCTCAGAGAACTGCTaGCAGTTATCTTCCCCAACT +
Preference number: 4 (lower is better)
Translates to: SGCSALPSNPSDDDADRNCSENC*QLSSPT
Trigger: AGTTGGGGAAGATAACTGGCAGCAGTTCTCTGAGCA...GTTTCTGTCTGCGTCGTCGTCGGAGGGATTACTGGGGAGTGCGCTGCATCCGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000589149.5
ENST00000592287.5
CDS-3UTR GCA 90 bp ACAGCGACTTCCGGATGCAGCGCACTCCCCAGTAATCCCTCCGACGACGACGCAAATTGCTCAGAGAACTaGTGCCAGTTATCTTCCCCA +
Preference number: 4 (lower is better)
Translates to: TATSGCSALPSNPSDDDANCSEN*CQLSSP
Trigger: TGGGGAAGATAACTGGCAGCAGTTCTCTGAGCAATT...TGCGTCGTCGTCGGAGGGATTACTGGGGAGTGCGCTGCATCCGGAAGTCGCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000589149.5
ENST00000592287.5
CDS-3UTR GCA 90 bp AGGATCTCTGGGCTCACTGGGTACTATGATGAGCAGGAAGTCCCAGGGAGATGGACAGCGACTTCCGGATaGAGCGCACTCCCCAGTAAT +
Preference number: 4 (lower is better)
Translates to: RISGLTGYYDEQEVPGRWTATSG*SALPSN
Trigger: ATTACTGGGGAGTGCGCTGCATCCGGAAGTCGCTGT...CCATCTCCCTGGGACTTCCTGCTCATCATAGTACCCAGTGAGCCCAGAGATCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR GCA 90 bp GACGGACGGGGAAGGCATCTGGATTTGAGTCCCACTCACTCCTCCCTAACCCCCATTCTACTGTCTCCATaGAGTCGGGGAAATGGTGGA +
Preference number: 4 (lower is better)
Translates to: DGRGRHLDLSPTHSSLTPILLSP*SRGNGG
Trigger: TCCACCATTTCCCCGACTGCATGGAGACAGTAGAAT...GGGGGTTAGGGAGGAGTGAGTGGGACTCAAATCCAGATGCCTTCCCCGTCCGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR GCA 90 bp AGGATCTCTGGGCTCACTGGGTACTATGATGAGCAGGAAGTCCCAGGGAGATGGTGGCTTCCAGAGACCTaGTCGAGTTTCATGGGGTGG +
Preference number: 4 (lower is better)
Translates to: RISGLTGYYDEQEVPGRWWLPET*SSFMGW
Trigger: CCACCCCATGAAACTCGAGCAGGTCTCTGGAAGCCA...CCATCTCCCTGGGACTTCCTGCTCATCATAGTACCCAGTGAGCCCAGAGATCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR CCA 90 bp GCCAGGGCAAATAGGTGCTCGATGAAGGTGTCAATATTGTCCATCAGCGCCTGGGTCTGCCACAGGGGGTaGGAAGCTCTGATAGTGTGC +
Preference number: 4 (lower is better)
Translates to: ARANRCSMKVSILSISAWVCHRG*EALIVC
Trigger: GCACACTATCAGAGCTTCCCACCCCCTGTGGCAGAC...CCAGGCGCTGATGGACAATATTGACACCTTCATCGAGCACCTATTTGCCCTGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000586775.5
CDS-3UTR CCA 90 bp CCAGAAGCTCTGATGAGTCTTCACAGATCTTCTGCAGGGCTCCAAAGGCTCCCTGTCTGCCACAGGGGGTaGGAAGCTCTGATAGTGTGC +
Preference number: 4 (lower is better)
Translates to: PEALMSLHRSSAGLQRLPVCHRG*EALIVC
Trigger: GCACACTATCAGAGCTTCCCACCCCCTGTGGCAGAC...AGGGAGCCTTTGGAGCCCTGCAGAAGATCTGTGAAGACTCATCAGAGCTTCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000586775.5
ENST00000587654.5
CDS-3UTR CCA 90 bp CCATGTTCCCAGACTATTCCGGAAGGTTCTCTAGAATTGCTGACCCAGTCTAGTAGCAGGTTGCAGAGCTaGGGCAGCAGCTCGGGCCAC +
Preference number: 4 (lower is better)
Translates to: PCSQTIPEGSLELLTQSSSRLQS*GSSSGH
Trigger: GTGGCCCGAGCTGCTGCCCCAGCTCTGCAACCTGCT...ACTAGACTGGGTCAGCAATTCTAGAGAACCTTCCGGAATAGTCTGGGAACATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR CCA 90 bp AGTAGGATCTCTGGGCTCACTGGGTACTATGATGAGCAGGAAGTCCCAGGGAGACGGTCCATGATGAACTaGTTCACGCAGGCGATGGCG +
Preference number: 4 (lower is better)
Translates to: SRISGLTGYYDEQEVPGRRSMMN*FTQAMA
Trigger: CGCCATCGCCTGCGTGAACCAGTTCATCATGGACCG...TCTCCCTGGGACTTCCTGCTCATCATAGTACCCAGTGAGCCCAGAGATCCTACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR CCA 90 bp ATGTTGAGGGGCCTGTTGAGGGCGTCACTGTCCAGAAGCTCTGATGAGTCTTCACGGTCCATGATGAACTaGTTCACGCAGGCGATGGCG +
Preference number: 4 (lower is better)
Translates to: MLRGLLRASLSRSSDESSRSMMN*FTQAMA
Trigger: CGCCATCGCCTGCGTGAACCAGTTCATCATGGACCG...TGAAGACTCATCAGAGCTTCTGGACAGTGACGCCCTCAACAGGCCCCTCAACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586775.5
CDS-3UTR CCA 90 bp GGGTTCACTAATTCTACTGTCTCCATGCAGTCGGGGAAATGGTGGAGCGGCTGGACCGTGCGTGACTTGTaGAAGCGTGGCTTGATGTCC +
Preference number: 4 (lower is better)
Translates to: GFTNSTVSMQSGKWWSGWTVRDL*KRGLMS
Trigger: GGACATCAAGCCACGCTTCCACAAGTCACGCACGGT...CCAGCCGCTCCACCATTTCCCCGACTGCATGGAGACAGTAGAATTAGTGAACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR CCA 90 bp GCGTGCAGGGACACCCAGCTAATTTATGGAATGTGTACTGAGTGCCCCTTGGAACCTCCCGGAAGACATTaGCGAGGACGTCCAGTGCAG +
Preference number: 4 (lower is better)
Translates to: ACRDTQLIYGMCTECPLEPPGRH*RGRPVQ
Trigger: CTGCACTGGACGTCCTCGCCAATGTCTTCCGGGAGG...TTCCAAGGGGCACTCAGTACACATTCCATAAATTAGCTGGGTGTCCCTGCACGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR CCA 90 bp CATGCACTGGAACAGCAATGTCATGATGTTGCTGCGGGCCACCAGCTGCTCCACAGCTCATTCCACTTCTaGATCAGTGGGGGCATCAGC +
Preference number: 4 (lower is better)
Translates to: HALEQQCHDVAAGHQLLHSSFHF*ISGGIS
Trigger: GCTGATGCCCCCACTGATCCAGAAGTGGAATGAGCT...GTGGAGCAGCTGGTGGCCCGCAGCAACATCATGACATTGCTGTTCCAGTGCATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000588491.1
ENST00000589572.5
CDS-3UTR CCA 90 bp TGCAGCGCACTCCCCAGTAATCCCTCCGACGACGACGCAGACAGAAACCTGGCAATACAGGGCTTGACATaGATGAAGCAGGCTTTGGTG +
Preference number: 4 (lower is better)
Translates to: CSALPSNPSDDDADRNLAIQGLT*MKQALV
Trigger: CACCAAAGCCTGCTTCATCCATGTCAAGCCCTGTAT...TGCCAGGTTTCTGTCTGCGTCGTCGTCGGAGGGATTACTGGGGAGTGCGCTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000592287.5
CDS-3UTR CCA 90 bp AGTAGGATCTCTGGGCTCACTGGGTACTATGATGAGCAGGAAGTCCCAGGGAGAAGGGAGTGTGTGGAGTaGGTCCCAAGCATGTGCGTG +
Preference number: 4 (lower is better)
Translates to: SRISGLTGYYDEQEVPGRRECVE*VPSMCV
Trigger: CACGCACATGCTTGGGACCCACTCCACACACTCCCT...TCTCCCTGGGACTTCCTGCTCATCATAGTACCCAGTGAGCCCAGAGATCCTACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR CCA 90 bp GCGTGCAGGGACACCCAGCTAATTTATGGAATGTGTACTGAGTGCCCCTTGGAACCTGCTCGAGTTTCATaGGGTGGGCGTGCAGGGACA +
Preference number: 4 (lower is better)
Translates to: ACRDTQLIYGMCTECPLEPARVS*GGRAGT
Trigger: TGTCCCTGCACGCCCACCCCATGAAACTCGAGCAGG...TTCCAAGGGGCACTCAGTACACATTCCATAAATTAGCTGGGTGTCCCTGCACGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR CCA 90 bp ATGGACGGACGGACGGACGGACGGGGAAGGCATCTGGATTTGAGTCCCACTCACAGATATCCCCCTCTGTaGCCTAGCCAAATTCTAAGG +
Preference number: 4 (lower is better)
Translates to: MDGRTDGRGRHLDLSPTHRYPPL*PSQILR
Trigger: CCTTAGAATTTGGCTAGGCCACAGAGGGGGATATCT...GTGAGTGGGACTCAAATCCAGATGCCTTCCCCGTCCGTCCGTCCGTCCGTCCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000450764.6
3UTR CAA 72 bp GCCAGGGCAAATAGGTGCTCGATGAAGGTGTCAATATaGTCCATCAGCGCCTGGGCCCGGTCCATGATGAAC +
Preference number: 4 (lower is better)
Translates to: ARANRCSMKVSI*SISAWARSMMN
Trigger: GTTCATCATGGACCGGGCCCAGGCGCTGATGGACAATATTGACACCTTCATCGAGCACCTATTTGCCCTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586775.5
CDS-3UTR TCA 90 bp CTCCCCAGTAATCCCTCCGACGACGACGCAGACAGAAACCTGGCAGTCTCCATGGCTCATCTTCTGACTTaGGTCTGGTCAGGACGAAAA +
Preference number: 4 (lower is better)
Translates to: LPSNPSDDDADRNLAVSMAHLLT*VWSGRK
Trigger: TTTTCGTCCTGACCAGACTCAAGTCAGAAGATGAGC...CATGGAGACTGCCAGGTTTCTGTCTGCGTCGTCGTCGGAGGGATTACTGGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000592287.5
CDS-3UTR TCA 90 bp GGGCGTCACTGTCCAGAAGCTCTGATGAGTCTTCACAGATCTTCTGCAGGGCTCCGTTGGCTCATCTTCTaGCTTGAGTCTGGTCAGGAC +
Preference number: 4 (lower is better)
Translates to: GRHCPEALMSLHRSSAGLRWLIF*LESGQD
Trigger: GTCCTGACCAGACTCAAGTCAGAAGATGAGCCAACG...GAGCCCTGCAGAAGATCTGTGAAGACTCATCAGAGCTTCTGGACAGTGACGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586775.5
ENST00000587654.5
CDS-3UTR TCA 90 bp GGGTTCACTAATTCTACTGTCTCCATGCAGTCGGGGAAATGGTGGAGCGGCTGGTGGGACTGCAGTGCTTaGAGAACTGCAGGAACTTGG +
Preference number: 4 (lower is better)
Translates to: GFTNSTVSMQSGKWWSGWWDCSA*RTAGTW
Trigger: CCAAGTTCCTGCAGTTCTTCAAGCACTGCAGTCCCA...CCAGCCGCTCCACCATTTCCCCGACTGCATGGAGACAGTAGAATTAGTGAACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR TCA 90 bp CTCGATGAAGGTGTCAATATTGTCCATCAGCGCCTGGGCCCGGTCCATGATGAATGTGCATGTGGGGGATaGGCCTGTCAATCCGCACTT +
Preference number: 4 (lower is better)
Translates to: LDEGVNIVHQRLGPVHDECACGG*ACQSAL
Trigger: AAGTGCGGATTGACAGGCTCATCCCCCACATGCACA...TTCATCATGGACCGGGCCCAGGCGCTGATGGACAATATTGACACCTTCATCGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000586775.5
CDS-3UTR TCA 90 bp TCCAGAAGCTCTGATGAGTCTTCACAGATCTTCTGCAGGGCTCCAAAGGCTCCCGCAGCATGTACTGGATaGTGCTGTGCATGTGGGGGA +
Preference number: 4 (lower is better)
Translates to: SRSSDESSQIFCRAPKAPAACTG*CCACGG
Trigger: TCCCCCACATGCACAGCATCATCCAGTACATGCTGC...GGGAGCCTTTGGAGCCCTGCAGAAGATCTGTGAAGACTCATCAGAGCTTCTGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000586775.5
CDS-3UTR TCA 90 bp ATCTCTGGGCTCACTGGGTACTATGATGAGCAGGAAGTCCCAGGGAGATGGAATTGTGGAAGCGTGGCTTaGTGTCCTGCTCACTGTCGG +
Preference number: 4 (lower is better)
Translates to: ISGLTGYYDEQEVPGRWNCGSVA*CPAHCR
Trigger: CCGACAGTGAGCAGGACATCAAGCCACGCTTCCACA...ATTCCATCTCCCTGGGACTTCCTGCTCATCATAGTACCCAGTGAGCCCAGAGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR TCA 90 bp ACTATGATGAGCAGGAAGTCCCAGGGAGATGGAATAGGGAACAGGGGACACACCCCAGTGCTACGATCATaGAGTCCTTGTCGGGAGCCT +
Preference number: 4 (lower is better)
Translates to: TMMSRKSQGDGIGNRGHTPVLRS*SPCREP
Trigger: AGGCTCCCGACAAGGACTTCATGATCGTAGCACTGG...GGTGTGTCCCCTGTTCCCTATTCCATCTCCCTGGGACTTCCTGCTCATCATAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR TCA 90 bp AGATCCAGTGCTACGATCATGAAGTCCTTGTCGGGAGCCTCATACTGCTCAGGGGGAACAGCAATGTCATaGTGTTGCTGCGGGCCACCA +
Preference number: 4 (lower is better)
Translates to: RSSATIMKSLSGASYCSGGTAMS*CCCGPP
Trigger: TGGTGGCCCGCAGCAACATCATGACATTGCTGTTCC...CCCTGAGCAGTATGAGGCTCCCGACAAGGACTTCATGATCGTAGCACTGGATCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000588491.1
ENST00000589572.5
CDS-3UTR TCA 90 bp CACTCCCCAGTAATCCCTCCGACGACGACGCAGACAGAAACCTGGCAGTCTCCACCCCAACTTGGTCTTTaGAGCCGTGGAGAATCTTAT +
Preference number: 4 (lower is better)
Translates to: HSPVIPPTTTQTETWQSPPQLGL*SRGESY
Trigger: ATAAGATTCTCCACGGCTTCAAAGACCAAGTTGGGG...TGGAGACTGCCAGGTTTCTGTCTGCGTCGTCGTCGGAGGGATTACTGGGGAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000589149.5
ENST00000592287.5
CDS-3UTR TCA 90 bp CTCTCTTCAGGAAAAAGGTCCCAACCCAGTGTCTTCAAAAGCCACTGGAGCACACAAGCATGTGCGTGCTaGCAGGGCGACTCCCAAGGT +
Preference number: 4 (lower is better)
Translates to: LSSGKRSQPSVFKSHWSTQACAC*QGDSQG
Trigger: ACCTTGGGAGTCGCCCTGTCAGCACGCACATGCTTG...TGTGCTCCAGTGGCTTTTGAAGACACTGGGTTGGGACCTTTTTCCTGAAGAGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR TCA 90 bp GTGGGTCCCAAGCATGTGCGTGCTGACAGGGCGACTCCCAAGGTCACCATCCTCTTATGGAATGTGTACTaGGTGCCCCTTGGAATAGAT +
Preference number: 4 (lower is better)
Translates to: VGPKHVRADRATPKVTILLWNVY*VPLGID
Trigger: ATCTATTCCAAGGGGCACTCAGTACACATTCCATAA...GAGGATGGTGACCTTGGGAGTCGCCCTGTCAGCACGCACATGCTTGGGACCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR TCA 90 bp GACGGACGGACGGGGAAGGCATCTGGATTTGAGTCCCACTCACTCCTCCCTAACGGTAGGGGAGAAGGTTaGGAAGCTGAAACTTCATTG +
Preference number: 4 (lower is better)
Translates to: DGRTGKASGFESHSLLPNGRGEG*EAETSL
Trigger: CAATGAAGTTTCAGCTTCTCAACCTTCTCCCCTACC...GTTAGGGAGGAGTGAGTGGGACTCAAATCCAGATGCCTTCCCCGTCCGTCCGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356861.9
CDS-3UTR GCA 90 bp TGCAGCGCACTCCCCAGTAATCCCTCCGACGACGACGCAGACAGAAACCTGGCAGAAGCTCTGATAGTGTaGCTTCACGTTGTTCTTGAG +
Preference number: 4 (lower is better)
Translates to: CSALPSNPSDDDADRNLAEALIV*LHVVLE
Trigger: CTCAAGAACAACGTGAAGGCACACTATCAGAGCTTC...TGCCAGGTTTCTGTCTGCGTCGTCGTCGGAGGGATTACTGGGGAGTGCGCTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000592287.5
CDS-3UTR GCA 90 bp GGTCAGCTGTGTAATTCCTCCCTCCCACGTAGCTGGCCCAAGTGGGCTGCCAGAGAAGCTCTGATAGTGTaGCTTCACGTTGTTCTTGAG +
Preference number: 4 (lower is better)
Translates to: GQLCNSSLPRSWPKWAAREALIV*LHVVLE
Trigger: CTCAAGAACAACGTGAAGGCACACTATCAGAGCTTC...TCTGGCAGCCCACTTGGGCCAGCTACGTGGGAGGGAGGAATTACACAGCTGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR GCA 90 bp TACACCCAGCTCTCTTCAGGAAAAAGGTCCCAACCCAGTGTCTTCAAAAGCCACAGCTCGGGCCACATCTaGAGCTCACCCTTGGAAGCG +
Preference number: 4 (lower is better)
Translates to: YTQLSSGKRSQPSVFKSHSSGHI*SSPLEA
Trigger: CGCTTCCAAGGGTGAGCTGCAGATGTGGCCCGAGCT...GTGGCTTTTGAAGACACTGGGTTGGGACCTTTTTCCTGAAGAGAGCTGGGTGTA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR GCA 90 bp GTAATCCTCCGAGTTAAGCAGGTTGCAGAGCTGGGGCAGCAGCTCGGGCCACATGCCAGGGCAAATAGGTaGTCGATGAAGGTGTCAATA +
Preference number: 4 (lower is better)
Translates to: VILRVKQVAELGQQLGPHARANR*SMKVSI
Trigger: TATTGACACCTTCATCGAGCACCTATTTGCCCTGGC...ATGTGGCCCGAGCTGCTGCCCCAGCTCTGCAACCTGCTTAACTCGGAGGATTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586775.5
CDS-3UTR GCA 90 bp GGGTTCACTAATTCTACTGTCTCCATGCAGTCGGGGAAATGGTGGAGCGGCTGGTGGTCCTGGGTCCTCTaGAGCATGTACTGGATGATG +
Preference number: 4 (lower is better)
Translates to: GFTNSTVSMQSGKWWSGWWSWVL*SMYWMM
Trigger: CATCATCCAGTACATGCTGCAGAGGACCCAGGACCA...CCAGCCGCTCCACCATTTCCCCGACTGCATGGAGACAGTAGAATTAGTGAACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR GCA 90 bp ATGCTCGGGGTAGGTGCCAGTAGCTCTGGCTACACCCAGCTCTCTTCAGGAAAATCATACTGCTCAGGGTaGTGGGTGTACATCATGGCC +
Preference number: 4 (lower is better)
Translates to: MLGVGASSSGYTQLSSGKSYCSG*WVYIMA
Trigger: GGCCATGATGTACACCCAGCACCCTGAGCAGTATGA...TTTTCCTGAAGAGAGCTGGGTGTAGCCAGAGCTACTGGCACCTACCCCGAGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR GCA 90 bp CAGTGCTACGATCATGAAGTCCTTGTCGGGAGCCTCATACTGCTCAGGGTGCTGTCATACTGCTCAGGGTaGTGGGTGTACATCATGGCC +
Preference number: 4 (lower is better)
Translates to: QCYDHEVLVGSLILLRVLSYCSG*WVYIMA
Trigger: GGCCATGATGTACACCCAGCACCCTGAGCAGTATGA...CAGCACCCTGAGCAGTATGAGGCTCCCGACAAGGACTTCATGATCGTAGCACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588491.1
ENST00000589572.5
CDS-3UTR GCA 90 bp CTCTCTTCAGGAAAAAGGTCCCAACCCAGTGTCTTCAAAAGCCACTGGAGCACACAAGGCCGGATGAACTaGTGCAGCATGGGTGCCACC +
Preference number: 4 (lower is better)
Translates to: LSSGKRSQPSVFKSHWSTQGRMN*CSMGAT
Trigger: GGTGGCACCCATGCTGCAGCAGTTCATCCGGCCTTG...TGTGCTCCAGTGGCTTTTGAAGACACTGGGTTGGGACCTTTTTCCTGAAGAGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR GCA 90 bp CTCCCCAGTAATCCCTCCGACGACGACGCAGACAGAAACCTGGCAGTCTCCATGTGCTCAGAGAACTGCTaGCAGTTATCTTCCCCAACT +
Preference number: 4 (lower is better)
Translates to: LPSNPSDDDADRNLAVSMCSENC*QLSSPT
Trigger: AGTTGGGGAAGATAACTGGCAGCAGTTCTCTGAGCA...CATGGAGACTGCCAGGTTTCTGTCTGCGTCGTCGTCGGAGGGATTACTGGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000589149.5
ENST00000592287.5
CDS-3UTR GCA 90 bp GACGGACGGACGGGGAAGGCATCTGGATTTGAGTCCCACTCACTCCTCCCTAACTGCTCAGAGAACTGCTaGCAGTTATCTTCCCCAACT +
Preference number: 4 (lower is better)
Translates to: DGRTGKASGFESHSLLPNCSENC*QLSSPT
Trigger: AGTTGGGGAAGATAACTGGCAGCAGTTCTCTGAGCA...GTTAGGGAGGAGTGAGTGGGACTCAAATCCAGATGCCTTCCCCGTCCGTCCGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000589149.5
CDS-3UTR GCA 90 bp CCGGAAGGTTCTCTAGAATTGCTGACCCAGTCTAGTAGGATCTCTGGGCTCACTTATGGCACCCGCACATaGGTGTGGCCATGTGTGTCC +
Preference number: 4 (lower is better)
Translates to: PEGSLELLTQSSRISGLTYGTRT*VWPCVS
Trigger: GGACACACATGGCCACACGCATGTGCGGGTGCCATA...AGTGAGCCCAGAGATCCTACTAGACTGGGTCAGCAATTCTAGAGAACCTTCCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR GCA 90 bp GACGGACGGACGGGGAAGGCATCTGGATTTGAGTCCCACTCACTCCTCCCTAACATTCTACTGTCTCCATaGAGTCGGGGAAATGGTGGA +
Preference number: 4 (lower is better)
Translates to: DGRTGKASGFESHSLLPNILLSP*SRGNGG
Trigger: TCCACCATTTCCCCGACTGCATGGAGACAGTAGAAT...GTTAGGGAGGAGTGAGTGGGACTCAAATCCAGATGCCTTCCCCGTCCGTCCGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR GCA 90 bp CGGACGGACGGACGGACGGGGAAGGCATCTGGATTTGAGTCCCACTCACTCCTCTTCTTAAACTCTAGATaGAGGTTACACGGAAGGCCT +
Preference number: 4 (lower is better)
Translates to: RTDGRTGKASGFESHSLLFLNSR*RLHGRP
Trigger: AGGCCTTCCGTGTAACCTGCATCTAGAGTTTAAGAA...GAGGAGTGAGTGGGACTCAAATCCAGATGCCTTCCCCGTCCGTCCGTCCGTCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR CCA 90 bp CCCAGTAATCCCTCCGACGACGACGCAGACAGAAACCTGGCAGTCTCCATGATCCTCTGCAGCATGTACTaGATGATGCTGTGCATGTGG +
Preference number: 4 (lower is better)
Translates to: PSNPSDDDADRNLAVSMILCSMY*MMLCMW
Trigger: CCACATGCACAGCATCATCCAGTACATGCTGCAGAG...GATCATGGAGACTGCCAGGTTTCTGTCTGCGTCGTCGTCGGAGGGATTACTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000592287.5
CDS-3UTR CCA 90 bp TGCATGTGGGGGATGAGCCTGTCAATCCGCACTTCCAGAAGCATCACCAGGGCACTCTGCAGCATGTACTaGATGATGCTGTGCATGTGG +
Preference number: 4 (lower is better)
Translates to: CMWGMSLSIRTSRSITRALCSMY*MMLCMW
Trigger: CCACATGCACAGCATCATCCAGTACATGCTGCAGAG...TGCCCTGGTGATGCTTCTGGAAGTGCGGATTGACAGGCTCATCCCCCACATGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000586775.5
CDS-3UTR CCA 90 bp CACTCCCCAGTAATCCCTCCGACGACGACGCAGACAGAAACCTGGCAGTCTCCATCCCATTCACCAAGATaGGGATCAACTGGACCAGAT +
Preference number: 4 (lower is better)
Translates to: HSPVIPPTTTQTETWQSPSHSPR*GSTGPD
Trigger: ATCTGGTCCAGTTGATCCCCATCTTGGTGAATGGGA...TGGAGACTGCCAGGTTTCTGTCTGCGTCGTCGTCGGAGGGATTACTGGGGAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000592287.5
CDS-3UTR CCA 90 bp CTAAGGGGGTCTGCAAGGCCCAGTTTTCTGGCCAACTGGGAAGTAACTACACCCTGGATGTATTCCGGCTaGTTGAGGTGGTGGCCTACA +
Preference number: 4 (lower is better)
Translates to: LRGSARPSFLANWEVTTPWMYSG*LRWWPT
Trigger: TGTAGGCCACCACCTCAACCAGCCGGAATACATCCA...GGGTGTAGTTACTTCCCAGTTGGCCAGAAAACTGGGCCTTGCAGACCCCCTTAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR CCA 90 bp TCCGGATGCAGCGCACTCCCCAGTAATCCCTCCGACGACGACGCAGACAGAAACTTATCTTCCCCAACTTaGTCTTTGAAGCCGTGGAGA +
Preference number: 4 (lower is better)
Translates to: SGCSALPSNPSDDDADRNLSSPT*SLKPWR
Trigger: TCTCCACGGCTTCAAAGACCAAGTTGGGGAAGATAA...GTTTCTGTCTGCGTCGTCGTCGGAGGGATTACTGGGGAGTGCGCTGCATCCGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000589149.5
ENST00000592287.5
CDS-3UTR CCA 90 bp TTGACCATGTTCCCAGACTATTCCGGAAGGTTCTCTAGAATTGCTGACCCAGTCTCCCTCCCACGTAGCTaGCCCAAGTGGGCTGCCAGA +
Preference number: 4 (lower is better)
Translates to: LTMFPDYSGRFSRIADPVSLPRS*PKWAAR
Trigger: TCTGGCAGCCCACTTGGGCCAGCTACGTGGGAGGGA...GACTGGGTCAGCAATTCTAGAGAACCTTCCGGAATAGTCTGGGAACATGGTCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR CCA 90 bp GACGGACGGACGGGGAAGGCATCTGGATTTGAGTCCCACTCACTCCTCCCTAACAGTTTTCTGGCCAACTaGGAAGTAACTACACCCCCA +
Preference number: 4 (lower is better)
Translates to: DGRTGKASGFESHSLLPNSFLAN*EVTTPP
Trigger: TGGGGGTGTAGTTACTTCCCAGTTGGCCAGAAAACT...GTTAGGGAGGAGTGAGTGGGACTCAAATCCAGATGCCTTCCCCGTCCGTCCGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
3UTR CAA 72 bp TGCAGGAACTTGGGGATCATGATGTTGAGGGGCCTGTaGAGGGCGTCACTGTCCAGAAGCTCTGATGAGTCT +
Preference number: 4 (lower is better)
Translates to: CRNLGIMMLRGL*RASLSRSSDES
Trigger: AGACTCATCAGAGCTTCTGGACAGTGACGCCCTCAACAGGCCCCTCAACATCATGATCCCCAAGTTCCTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586775.5
CDS-3UTR TCA 90 bp TACACCCAGCTCTCTTCAGGAAAAAGGTCCCAACCCAGTGTCTTCAAAAGCCACGCGACTGTGAGTCTTTaGGCAGCTGCAGGACCTGCT +
Preference number: 4 (lower is better)
Translates to: YTQLSSGKRSQPSVFKSHATVSL*AAAGPA
Trigger: AGCAGGTCCTGCAGCTGCTCAAAGACTCACAGTCGC...GTGGCTTTTGAAGACACTGGGTTGGGACCTTTTTCCTGAAGAGAGCTGGGTGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR TCA 90 bp TGCATGTGGGGGATGAGCCTGTCAATCCGCACTTCCAGAAGCATCACCAGGGCAGCTCATCTTCTGACTTaGGTCTGGTCAGGACGAAAA +
Preference number: 4 (lower is better)
Translates to: CMWGMSLSIRTSRSITRAAHLLT*VWSGRK
Trigger: TTTTCGTCCTGACCAGACTCAAGTCAGAAGATGAGC...TGCCCTGGTGATGCTTCTGGAAGTGCGGATTGACAGGCTCATCCCCCACATGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000586775.5
CDS-3UTR TCA 90 bp AGTAGGATCTCTGGGCTCACTGGGTACTATGATGAGCAGGAAGTCCCAGGGAGACGTTGGCTCATCTTCTaGCTTGAGTCTGGTCAGGAC +
Preference number: 4 (lower is better)
Translates to: SRISGLTGYYDEQEVPGRRWLIF*LESGQD
Trigger: GTCCTGACCAGACTCAAGTCAGAAGATGAGCCAACG...TCTCCCTGGGACTTCCTGCTCATCATAGTACCCAGTGAGCCCAGAGATCCTACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR TCA 90 bp TCCAGAAGCTCTGATGAGTCTTCACAGATCTTCTGCAGGGCTCCAAAGGCTCCCCGTTGGCTCATCTTCTaGCTTGAGTCTGGTCAGGAC +
Preference number: 4 (lower is better)
Translates to: SRSSDESSQIFCRAPKAPRWLIF*LESGQD
Trigger: GTCCTGACCAGACTCAAGTCAGAAGATGAGCCAACG...GGGAGCCTTTGGAGCCCTGCAGAAGATCTGTGAAGACTCATCAGAGCTTCTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586775.5
ENST00000587654.5
CDS-3UTR TCA 90 bp ATCCTCCGAGTTAAGCAGGTTGCAGAGCTGGGGCAGCAGCTCGGGCCACATCTGCAAATAGGTGCTCGATaGAGGTGTCAATATTGTCCA +
Preference number: 4 (lower is better)
Translates to: ILRVKQVAELGQQLGPHLQIGAR*RCQYCP
Trigger: TGGACAATATTGACACCTTCATCGAGCACCTATTTG...CAGATGTGGCCCGAGCTGCTGCCCCAGCTCTGCAACCTGCTTAACTCGGAGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586775.5
CDS-3UTR TCA 90 bp TGCAGCGCACTCCCCAGTAATCCCTCCGACGACGACGCAGACAGAAACCTGGCACAAATAGGTGCTCGATaGAGGTGTCAATATTGTCCA +
Preference number: 4 (lower is better)
Translates to: CSALPSNPSDDDADRNLAQIGAR*RCQYCP
Trigger: TGGACAATATTGACACCTTCATCGAGCACCTATTTG...TGCCAGGTTTCTGTCTGCGTCGTCGTCGGAGGGATTACTGGGGAGTGCGCTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000592287.5
CDS-3UTR TCA 90 bp TTGACCATGTTCCCAGACTATTCCGGAAGGTTCTCTAGAATTGCTGACCCAGTCCTGTCATCAGGGGCTTaGGGTGCATGTCGGGTGGCT +
Preference number: 4 (lower is better)
Translates to: LTMFPDYSGRFSRIADPVLSSGA*GACRVA
Trigger: AGCCACCCGACATGCACCTCAAGCCCCTGATGACAG...GACTGGGTCAGCAATTCTAGAGAACCTTCCGGAATAGTCTGGGAACATGGTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR TCA 90 bp CAGTGCTACGATCATGAAGTCCTTGTCGGGAGCCTCATACTGCTCAGGGTGCTGCCTTGTCTTCGTCCTTaGGCTCATTCCACTTCTGGA +
Preference number: 4 (lower is better)
Translates to: QCYDHEVLVGSLILLRVLPCLRP*AHSTSG
Trigger: TCCAGAAGTGGAATGAGCTCAAGGACGAAGACAAGG...CAGCACCCTGAGCAGTATGAGGCTCCCGACAAGGACTTCATGATCGTAGCACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588491.1
ENST00000589572.5
CDS-3UTR TCA 90 bp AGCAGATCCAGTGCTACGATCATGAAGTCCTTGTCGGGAGCCTCATACTGCTCAGGAACAGCAATGTCATaGTGTTGCTGCGGGCCACCA +
Preference number: 4 (lower is better)
Translates to: SRSSATIMKSLSGASYCSGTAMS*CCCGPP
Trigger: TGGTGGCCCGCAGCAACATCATGACATTGCTGTTCC...TGAGCAGTATGAGGCTCCCGACAAGGACTTCATGATCGTAGCACTGGATCTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588491.1
ENST00000589572.5
CDS-3UTR GCA 90 bp ACTATGATGAGCAGGAAGTCCCAGGGAGATGGAATAGGGAACAGGGGACACACCGTTTATCCTGCACGATaGGCTGAGTGGCTGTGTTGG +
Preference number: 4 (lower is better)
Translates to: TMMSRKSQGDGIGNRGHTVYPAR*AEWLCW
Trigger: CCAACACAGCCACTCAGCGCATCGTGCAGGATAAAC...GGTGTGTCCCCTGTTCCCTATTCCATCTCCCTGGGACTTCCTGCTCATCATAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR GCA 90 bp TCCAGAAGCTCTGATGAGTCTTCACAGATCTTCTGCAGGGCTCCAAAGGCTCCCGTTTATCCTGCACGATaGGCTGAGTGGCTGTGTTGG +
Preference number: 4 (lower is better)
Translates to: SRSSDESSQIFCRAPKAPVYPAR*AEWLCW
Trigger: CCAACACAGCCACTCAGCGCATCGTGCAGGATAAAC...GGGAGCCTTTGGAGCCCTGCAGAAGATCTGTGAAGACTCATCAGAGCTTCTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586775.5
ENST00000587654.5
CDS-3UTR GCA 90 bp CCAGAAGCTCTGATGAGTCTTCACAGATCTTCTGCAGGGCTCCAAAGGCTCCCTCTGTTTGATGAAGTCTaGCACAGGGGGTGGGAAGCT +
Preference number: 4 (lower is better)
Translates to: PEALMSLHRSSAGLQRLPLFDEV*HRGWEA
Trigger: AGCTTCCCACCCCCTGTGGCAGACTTCATCAAACAG...AGGGAGCCTTTGGAGCCCTGCAGAAGATCTGTGAAGACTCATCAGAGCTTCTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000586775.5
ENST00000587654.5
CDS-3UTR GCA 90 bp ATGATGTTGAGGGGCCTGTTGAGGGCGTCACTGTCCAGAAGCTCTGATGAGTCTCTGTTTGATGAAGTCTaGCACAGGGGGTGGGAAGCT +
Preference number: 4 (lower is better)
Translates to: MMLRGLLRASLSRSSDESLFDEV*HRGWEA
Trigger: AGCTTCCCACCCCCTGTGGCAGACTTCATCAAACAG...AGACTCATCAGAGCTTCTGGACAGTGACGCCCTCAACAGGCCCCTCAACATCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000586775.5
ENST00000587654.5
CDS-3UTR GCA 90 bp ATGTTGAGGGGCCTGTTGAGGGCGTCACTGTCCAGAAGCTCTGATGAGTCTTCATGGTCCTGGGTCCTCTaGAGCATGTACTGGATGATG +
Preference number: 4 (lower is better)
Translates to: MLRGLLRASLSRSSDESSWSWVL*SMYWMM
Trigger: CATCATCCAGTACATGCTGCAGAGGACCCAGGACCA...TGAAGACTCATCAGAGCTTCTGGACAGTGACGCCCTCAACAGGCCCCTCAACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586775.5
CDS-3UTR GCA 90 bp GACGGACGGACGGGGAAGGCATCTGGATTTGAGTCCCACTCACTCCTCCCTAACAATTGCTCAGAGAACTaGTGCCAGTTATCTTCCCCA +
Preference number: 4 (lower is better)
Translates to: DGRTGKASGFESHSLLPNNCSEN*CQLSSP
Trigger: TGGGGAAGATAACTGGCAGCAGTTCTCTGAGCAATT...GTTAGGGAGGAGTGAGTGGGACTCAAATCCAGATGCCTTCCCCGTCCGTCCGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000589149.5
CDS-3UTR GCA 90 bp CCATGTTCCCAGACTATTCCGGAAGGTTCTCTAGAATTGCTGACCCAGTCTAGTCTGAGCTTCCCCAGATaGGCCCTCCCAAGACGATCG +
Preference number: 4 (lower is better)
Translates to: PCSQTIPEGSLELLTQSSLSFPR*ALPRRS
Trigger: CGATCGTCTTGGGAGGGCGCATCTGGGGAAGCTCAG...ACTAGACTGGGTCAGCAATTCTAGAGAACCTTCCGGAATAGTCTGGGAACATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450764.6
CDS-3UTR GCA 90 bp ATCTCTGGGCTCACTGGGTACTATGATGAGCAGGAAGTCCCAGGGAGATGGAATTCTGCCCTTAACTTCTaGCAGATCCCAGAGGCCTCC +
Preference number: 4 (lower is better)
Translates to: ISGLTGYYDEQEVPGRWNSALNF*QIPEAS
Trigger: GGAGGCCTCTGGGATCTGGCAGAAGTTAAGGGCAGA...ATTCCATCTCCCTGGGACTTCCTGCTCATCATAGTACCCAGTGAGCCCAGAGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450764.6
CDS-3UTR CCA 90 bp ACTATGATGAGCAGGAAGTCCCAGGGAGATGGAATAGGGAACAGGGGACACACCAGCTCATTCCACTTCTaGATCAGTGGGGGCATCAGC +
Preference number: 4 (lower is better)
Translates to: TMMSRKSQGDGIGNRGHTSSFHF*ISGGIS
Trigger: GCTGATGCCCCCACTGATCCAGAAGTGGAATGAGCT...GGTGTGTCCCCTGTTCCCTATTCCATCTCCCTGGGACTTCCTGCTCATCATAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR CCA 90 bp TTGACCATGTTCCCAGACTATTCCGGAAGGTTCTCTAGAATTGCTGACCCAGTCCGTAGCTGGCCCAAGTaGGCTGCCAGAGATGACCCT +
Preference number: 4 (lower is better)
Translates to: LTMFPDYSGRFSRIADPVRSWPK*AARDDP
Trigger: AGGGTCATCTCTGGCAGCCCACTTGGGCCAGCTACG...GACTGGGTCAGCAATTCTAGAGAACCTTCCGGAATAGTCTGGGAACATGGTCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR CCA 90 bp CCCAGTAATCCCTCCGACGACGACGCAGACAGAAACCTGGCAGTCTCCATGATCCCTTCCACCAAGCCTTaGTTTTCCTTTTTGCTGGCA +
Preference number: 4 (lower is better)
Translates to: PSNPSDDDADRNLAVSMIPSTKP*FSFLLA
Trigger: TGCCAGCAAAAAGGAAAACCAAGGCTTGGTGGAAGG...GATCATGGAGACTGCCAGGTTTCTGTCTGCGTCGTCGTCGGAGGGATTACTGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR CCA 90 bp CTGACCTGCTCCTCCCTCACCTCATCCGAAGCCGGATTCGGTCAGCTGTGTAATCCTTCCACCAAGCCTTaGTTTTCCTTTTTGCTGGCA +
Preference number: 4 (lower is better)
Translates to: LTCSSLTSSEAGFGQLCNPSTKP*FSFLLA
Trigger: TGCCAGCAAAAAGGAAAACCAAGGCTTGGTGGAAGG...ATTACACAGCTGACCGAATCCGGCTTCGGATGAGGTGAGGGAGGAGCAGGTCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR TCA 90 bp TACACCCAGCTCTCTTCAGGAAAAAGGTCCCAACCCAGTGTCTTCAAAAGCCACTGTGTTGGGCGACTGTaGGTCTTTGAGCAGCTGCAG +
Preference number: 4 (lower is better)
Translates to: YTQLSSGKRSQPSVFKSHCVGRL*VFEQLQ
Trigger: CTGCAGCTGCTCAAAGACTCACAGTCGCCCAACACA...GTGGCTTTTGAAGACACTGGGTTGGGACCTTTTTCCTGAAGAGAGCTGGGTGTA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR TCA 90 bp GGGCGTCACTGTCCAGAAGCTCTGATGAGTCTTCACAGATCTTCTGCAGGGCTCGCTCATCTTCTGACTTaGGTCTGGTCAGGACGAAAA +
Preference number: 4 (lower is better)
Translates to: GRHCPEALMSLHRSSAGLAHLLT*VWSGRK
Trigger: TTTTCGTCCTGACCAGACTCAAGTCAGAAGATGAGC...GAGCCCTGCAGAAGATCTGTGAAGACTCATCAGAGCTTCTGGACAGTGACGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586775.5
ENST00000587654.5
CDS-3UTR TCA 90 bp CCATGTTCCCAGACTATTCCGGAAGGTTCTCTAGAATTGCTGACCCAGTCTAGTGGAAGAGGAGGCCTTTaGGTAGTGGGAGTAGGTGGG +
Preference number: 4 (lower is better)
Translates to: PCSQTIPEGSLELLTQSSGRGGL*VVGVGG
Trigger: CCCACCTACTCCCACTACTCAAAGGCCTCCTCTTCC...ACTAGACTGGGTCAGCAATTCTAGAGAACCTTCCGGAATAGTCTGGGAACATGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR TCA 90 bp GGATGGAGCAGGCCCCAGGATGCGAGACTCCAGTCAGACTCCAAAACACAAGGGTTATGGAATGTGTACTaGGTGCCCCTTGGAATAGAT +
Preference number: 4 (lower is better)
Translates to: GWSRPQDARLQSDSKTQGLWNVY*VPLGID
Trigger: ATCTATTCCAAGGGGCACTCAGTACACATTCCATAA...CCCTTGTGTTTTGGAGTCTGACTGGAGTCTCGCATCCTGGGGCCTGCTCCATCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR GCA 90 bp ATGCTCGGGGTAGGTGCCAGTAGCTCTGGCTACACCCAGCTCTCTTCAGGAAAAGCCAGGGCAAATAGGTaGTCGATGAAGGTGTCAATA +
Preference number: 4 (lower is better)
Translates to: MLGVGASSSGYTQLSSGKARANR*SMKVSI
Trigger: TATTGACACCTTCATCGAGCACCTATTTGCCCTGGC...TTTTCCTGAAGAGAGCTGGGTGTAGCCAGAGCTACTGGCACCTACCCCGAGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR GCA 90 bp CGTCACTGTCCAGAAGCTCTGATGAGTCTTCACAGATCTTCTGCAGGGCTCCAATACTGGATGATGCTGTaGATGTGGGGGATGAGCCTG +
Preference number: 4 (lower is better)
Translates to: RHCPEALMSLHRSSAGLQYWMML*MWGMSL
Trigger: CAGGCTCATCCCCCACATGCACAGCATCATCCAGTA...TTGGAGCCCTGCAGAAGATCTGTGAAGACTCATCAGAGCTTCTGGACAGTGACG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000586775.5
CDS-3UTR GCA 90 bp CTCCAGCAGGGGGAAGAGGTCCTTGTCTTCGTCCTTGAGCTCATTCCACTTCTGGCTGAGCAGATCCAGTaGTACGATCATGAAGTCCTT +
Preference number: 4 (lower is better)
Translates to: LQQGEEVLVFVLELIPLLAEQIQ*YDHEVL
Trigger: AAGGACTTCATGATCGTAGCACTGGATCTGCTCAGC...CAGAAGTGGAATGAGCTCAAGGACGAAGACAAGGACCTCTTCCCCCTGCTGGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000588491.1
ENST00000589572.5
CDS-3UTR GCA 90 bp AGATCCAGTGCTACGATCATGAAGTCCTTGTCGGGAGCCTCATACTGCTCAGGGGCATCGAGTCCTGCATaGACTGGAACAGCAATGTCA +
Preference number: 4 (lower is better)
Translates to: RSSATIMKSLSGASYCSGASSPA*TGTAMS
Trigger: TGACATTGCTGTTCCAGTGCATGCAGGACTCGATGC...CCCTGAGCAGTATGAGGCTCCCGACAAGGACTTCATGATCGTAGCACTGGATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000588491.1
ENST00000589572.5
CDS-3UTR GCA 90 bp TACACCCAGCTCTCTTCAGGAAAAAGGTCCCAACCCAGTGTCTTCAAAAGCCACTTCATGGGGTGGGCGTaGAGGGACACCCAGCTAATT +
Preference number: 4 (lower is better)
Translates to: YTQLSSGKRSQPSVFKSHFMGWA*RDTQLI
Trigger: AATTAGCTGGGTGTCCCTGCACGCCCACCCCATGAA...GTGGCTTTTGAAGACACTGGGTTGGGACCTTTTTCCTGAAGAGAGCTGGGTGTA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR CCA 90 bp TTGACCATGTTCCCAGACTATTCCGGAAGGTTCTCTAGAATTGCTGACCCAGTCCGGTCCATGATGAACTaGTTCACGCAGGCGATGGCG +
Preference number: 4 (lower is better)
Translates to: LTMFPDYSGRFSRIADPVRSMMN*FTQAMA
Trigger: CGCCATCGCCTGCGTGAACCAGTTCATCATGGACCG...GACTGGGTCAGCAATTCTAGAGAACCTTCCGGAATAGTCTGGGAACATGGTCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR CCA 90 bp GCGTCACTGTCCAGAAGCTCTGATGAGTCTTCACAGATCTTCTGCAGGGCTCCATTCTCATCATGGTCCTaGGTCCTCTGCAGCATGTAC +
Preference number: 4 (lower is better)
Translates to: ASLSRSSDESSQIFCRAPFSSWS*VLCSMY
Trigger: GTACATGCTGCAGAGGACCCAGGACCATGATGAGAA...TGGAGCCCTGCAGAAGATCTGTGAAGACTCATCAGAGCTTCTGGACAGTGACGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586775.5
CDS-3UTR TCA 90 bp CTCTCTTCAGGAAAAAGGTCCCAACCCAGTGTCTTCAAAAGCCACTGGAGCACACGTTGGCTCATCTTCTaGCTTGAGTCTGGTCAGGAC +
Preference number: 4 (lower is better)
Translates to: LSSGKRSQPSVFKSHWSTRWLIF*LESGQD
Trigger: GTCCTGACCAGACTCAAGTCAGAAGATGAGCCAACG...TGTGCTCCAGTGGCTTTTGAAGACACTGGGTTGGGACCTTTTTCCTGAAGAGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR TCA 90 bp TTGACCATGTTCCCAGACTATTCCGGAAGGTTCTCTAGAATTGCTGACCCAGTCGTCCAGTGCAGCCGCTaGGCACTTCCTCAAATTCCA +
Preference number: 4 (lower is better)
Translates to: LTMFPDYSGRFSRIADPVVQCSR*ALPQIP
Trigger: TGGAATTTGAGGAAGTGCTCAGCGGCTGCACTGGAC...GACTGGGTCAGCAATTCTAGAGAACCTTCCGGAATAGTCTGGGAACATGGTCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR TCA 90 bp AGTAGGATCTCTGGGCTCACTGGGTACTATGATGAGCAGGAAGTCCCAGGGAGACCCCAACTTGGTCTTTaGAGCCGTGGAGAATCTTAT +
Preference number: 4 (lower is better)
Translates to: SRISGLTGYYDEQEVPGRPQLGL*SRGESY
Trigger: ATAAGATTCTCCACGGCTTCAAAGACCAAGTTGGGG...TCTCCCTGGGACTTCCTGCTCATCATAGTACCCAGTGAGCCCAGAGATCCTACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR TCA 90 bp TTGACCATGTTCCCAGACTATTCCGGAAGGTTCTCTAGAATTGCTGACCCAGTCGAAACGGACTGCCCCTaGAGCTGCTTACAGAGAGAG +
Preference number: 4 (lower is better)
Translates to: LTMFPDYSGRFSRIADPVETDCP*SCLQRE
Trigger: CTCTCTCTGTAAGCAGCTTCAGGGGCAGTCCGTTTC...GACTGGGTCAGCAATTCTAGAGAACCTTCCGGAATAGTCTGGGAACATGGTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR TCA 90 bp TGCAGCGCACTCCCCAGTAATCCCTCCGACGACGACGCAGACAGAAACCTGGCAAGAAGGTTGAGAAGCTaGAACTTCATTGTGCAAAAA +
Preference number: 4 (lower is better)
Translates to: CSALPSNPSDDDADRNLARRLRS*NFIVQK
Trigger: TTTTTGCACAATGAAGTTTCAGCTTCTCAACCTTCT...TGCCAGGTTTCTGTCTGCGTCGTCGTCGGAGGGATTACTGGGGAGTGCGCTGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356861.9
CDS-3UTR GCA 90 bp GCGTGCAGGGACACCCAGCTAATTTATGGAATGTGTACTGAGTGCCCCTTGGAAGCATCGAGTCCTGCATaGACTGGAACAGCAATGTCA +
Preference number: 4 (lower is better)
Translates to: ACRDTQLIYGMCTECPLEASSPA*TGTAMS
Trigger: TGACATTGCTGTTCCAGTGCATGCAGGACTCGATGC...TTCCAAGGGGCACTCAGTACACATTCCATAAATTAGCTGGGTGTCCCTGCACGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR GCA 90 bp CCATGTTCCCAGACTATTCCGGAAGGTTCTCTAGAATTGCTGACCCAGTCTAGTCTGCCCCCATCTGCATaGAGATTTCACCAATGGCCC +
Preference number: 4 (lower is better)
Translates to: PCSQTIPEGSLELLTQSSLPPSA*RFHQWP
Trigger: GGGCCATTGGTGAAATCTGCATGCAGATGGGGGCAG...ACTAGACTGGGTCAGCAATTCTAGAGAACCTTCCGGAATAGTCTGGGAACATGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR GCA 90 bp AGTAGGATCTCTGGGCTCACTGGGTACTATGATGAGCAGGAAGTCCCAGGGAGAATCTCTGCCCCCATCTaGATGCAGATTTCACCAATG +
Preference number: 4 (lower is better)
Translates to: SRISGLTGYYDEQEVPGRISAPI*MQISPM
Trigger: CATTGGTGAAATCTGCATGCAGATGGGGGCAGAGAT...TCTCCCTGGGACTTCCTGCTCATCATAGTACCCAGTGAGCCCAGAGATCCTACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR CCA 90 bp CTAAGGGGGTCTGCAAGGCCCAGTTTTCTGGCCAACTGGGAAGTAACTACACCCTTATCTTCCCCAACTTaGTCTTTGAAGCCGTGGAGA +
Preference number: 4 (lower is better)
Translates to: LRGSARPSFLANWEVTTPLSSPT*SLKPWR
Trigger: TCTCCACGGCTTCAAAGACCAAGTTGGGGAAGATAA...GGGTGTAGTTACTTCCCAGTTGGCCAGAAAACTGGGCCTTGCAGACCCCCTTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR TCA 90 bp ATGCTCGGGGTAGGTGCCAGTAGCTCTGGCTACACCCAGCTCTCTTCAGGAAAACAAATAGGTGCTCGATaGAGGTGTCAATATTGTCCA +
Preference number: 4 (lower is better)
Translates to: MLGVGASSSGYTQLSSGKQIGAR*RCQYCP
Trigger: TGGACAATATTGACACCTTCATCGAGCACCTATTTG...TTTTCCTGAAGAGAGCTGGGTGTAGCCAGAGCTACTGGCACCTACCCCGAGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR TCA 90 bp GCGTGCAGGGACACCCAGCTAATTTATGGAATGTGTACTGAGTGCCCCTTGGAATTTCCACCAGGTTGTTaGGGACCATCTGCACATAAG +
Preference number: 4 (lower is better)
Translates to: ACRDTQLIYGMCTECPLEFPPGC*GPSAHK
Trigger: CTTATGTGCAGATGGTCCTCAACAACCTGGTGGAAA...TTCCAAGGGGCACTCAGTACACATTCCATAAATTAGCTGGGTGTCCCTGCACGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR GCA 90 bp ATGATGTTGAGGGGCCTGTTGAGGGCGTCACTGTCCAGAAGCTCTGATGAGTCTGAAGCTCTGATAGTGTaGCTTCACGTTGTTCTTGAG +
Preference number: 4 (lower is better)
Translates to: MMLRGLLRASLSRSSDESEALIV*LHVVLE
Trigger: CTCAAGAACAACGTGAAGGCACACTATCAGAGCTTC...AGACTCATCAGAGCTTCTGGACAGTGACGCCCTCAACAGGCCCCTCAACATCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586775.5
ENST00000587654.5
CDS-3UTR GCA 90 bp ATGTTGAGGGGCCTGTTGAGGGCGTCACTGTCCAGAAGCTCTGATGAGTCTTCAGAAGCTCTGATAGTGTaGCTTCACGTTGTTCTTGAG +
Preference number: 4 (lower is better)
Translates to: MLRGLLRASLSRSSDESSEALIV*LHVVLE
Trigger: CTCAAGAACAACGTGAAGGCACACTATCAGAGCTTC...TGAAGACTCATCAGAGCTTCTGGACAGTGACGCCCTCAACAGGCCCCTCAACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586775.5
ENST00000587654.5
CDS-3UTR GCA 90 bp TTGACCATGTTCCCAGACTATTCCGGAAGGTTCTCTAGAATTGCTGACCCAGTCCTGTTTGATGAAGTCTaGCACAGGGGGTGGGAAGCT +
Preference number: 4 (lower is better)
Translates to: LTMFPDYSGRFSRIADPVLFDEV*HRGWEA
Trigger: AGCTTCCCACCCCCTGTGGCAGACTTCATCAAACAG...GACTGGGTCAGCAATTCTAGAGAACCTTCCGGAATAGTCTGGGAACATGGTCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR GCA 90 bp AGCAGATCCAGTGCTACGATCATGAAGTCCTTGTCGGGAGCCTCATACTGCTCAGCTGAGCAGATCCAGTaGTACGATCATGAAGTCCTT +
Preference number: 4 (lower is better)
Translates to: SRSSATIMKSLSGASYCSAEQIQ*YDHEVL
Trigger: AAGGACTTCATGATCGTAGCACTGGATCTGCTCAGC...TGAGCAGTATGAGGCTCCCGACAAGGACTTCATGATCGTAGCACTGGATCTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588491.1
ENST00000589572.5
CDS-3UTR GCA 90 bp CTCTCTTCAGGAAAAAGGTCCCAACCCAGTGTCTTCAAAAGCCACTGGAGCACATTCAAGCTCAGTGGATaGCAGATATCCCCCTCTGTG +
Preference number: 4 (lower is better)
Translates to: LSSGKRSQPSVFKSHWSTFKLSG*QISPSV
Trigger: CACAGAGGGGGATATCTGGCATCCACTGAGCTTGAA...TGTGCTCCAGTGGCTTTTGAAGACACTGGGTTGGGACCTTTTTCCTGAAGAGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000450764.6
CDS-3UTR CCA 90 bp TACACCCAGCTCTCTTCAGGAAAAAGGTCCCAACCCAGTGTCTTCAAAAGCCACTTCTCATCATGGTCCTaGGTCCTCTGCAGCATGTAC +
Preference number: 4 (lower is better)
Translates to: YTQLSSGKRSQPSVFKSHFSSWS*VLCSMY
Trigger: GTACATGCTGCAGAGGACCCAGGACCATGATGAGAA...GTGGCTTTTGAAGACACTGGGTTGGGACCTTTTTCCTGAAGAGAGCTGGGTGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
3UTR CAA 72 bp CCATGTTCCCAGACTATTCCGGAAGGTTCTCTAGAATaGCTGACCCAGTCTAGTAGGATCTCTGGGCTCACT +
Preference number: 4 (lower is better)
Translates to: PCSQTIPEGSLE*LTQSSRISGLT
Trigger: AGTGAGCCCAGAGATCCTACTAGACTGGGTCAGCAATTCTAGAGAACCTTCCGGAATAGTCTGGGAACATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000425528.5
ENST00000450764.6
CDS-3UTR TCA 90 bp CTCTCTTCAGGAAAAAGGTCCCAACCCAGTGTCTTCAAAAGCCACTGGAGCACAGCTCATCTTCTGACTTaGGTCTGGTCAGGACGAAAA +
Preference number: 4 (lower is better)
Translates to: LSSGKRSQPSVFKSHWSTAHLLT*VWSGRK
Trigger: TTTTCGTCCTGACCAGACTCAAGTCAGAAGATGAGC...TGTGCTCCAGTGGCTTTTGAAGACACTGGGTTGGGACCTTTTTCCTGAAGAGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR GCA 90 bp CTCTCTTCAGGAAAAAGGTCCCAACCCAGTGTCTTCAAAAGCCACTGGAGCACAATCTTGGGACTGCAGTaGTTGAAGAACTGCAGGAAC +
Preference number: 4 (lower is better)
Translates to: LSSGKRSQPSVFKSHWSTILGLQ*LKNCRN
Trigger: GTTCCTGCAGTTCTTCAAGCACTGCAGTCCCAAGAT...TGTGCTCCAGTGGCTTTTGAAGACACTGGGTTGGGACCTTTTTCCTGAAGAGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR GCA 90 bp CCGGAAGGTTCTCTAGAATTGCTGACCCAGTCTAGTAGGATCTCTGGGCTCACTAATTGCTCAGAGAACTaGTGCCAGTTATCTTCCCCA +
Preference number: 4 (lower is better)
Translates to: PEGSLELLTQSSRISGLTNCSEN*CQLSSP
Trigger: TGGGGAAGATAACTGGCAGCAGTTCTCTGAGCAATT...AGTGAGCCCAGAGATCCTACTAGACTGGGTCAGCAATTCTAGAGAACCTTCCGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR CCA 90 bp CTCTCTTCAGGAAAAAGGTCCCAACCCAGTGTCTTCAAAAGCCACTGGAGCACATTATCTTCCCCAACTTaGTCTTTGAAGCCGTGGAGA +
Preference number: 4 (lower is better)
Translates to: LSSGKRSQPSVFKSHWSTLSSPT*SLKPWR
Trigger: TCTCCACGGCTTCAAAGACCAAGTTGGGGAAGATAA...TGTGCTCCAGTGGCTTTTGAAGACACTGGGTTGGGACCTTTTTCCTGAAGAGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS GCA 90 bp GAGGCCTCCGATCCACGCCCGCCCAAGTGCGGGGTCCCCGCCAGCTaGGCCATCCTCGGCCGCGCAGTCGCGGGCTCGGGAGCGCGGGAG +
Preference number: 5 (lower is better)
Translates to: EASDPRPPKCGVPAS*AILGRAVAGSGARE
Trigger: CTCCCGCGCTCCCGAGCCCGCGACTGCGCGGCCGAGGATGGCGCAGCTGGCGGGGACCCCGCACTTGGGCGGGCGTGGATCGGAGGCCTC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450764.6
CDS TCA 90 bp ATGGGACCCAGCGAAGAGCCCTCGTCCCAGGGTGGCCCATGCCGCTaGCCCCGGCTCCGAGCCCGAAGGCTTCCACCTCCCTCGCAGCGG +
Preference number: 5 (lower is better)
Translates to: MGPSEEPSSQGGPCR*PRLRARRLPPPSQR
Trigger: CCGCTGCGAGGGAGGTGGAAGCCTTCGGGCTCGGAGCCGGGGTCAGCGGCATGGGCCACCCTGGGACGAGGGCTCTTCGCTGGGTCCCAT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450764.6
CDS CCA 90 bp CCGGCGGATCCTCATGGGACCCAGCGAAGAGCCCTCGTCCCAGGGTaGCCCATGCCGCTGACCCCGGCTCCGAGCCCGAAGGCTTCCACC +
Preference number: 5 (lower is better)
Translates to: PADPHGTQRRALVPG*PMPLTPAPSPKAST
Trigger: GGTGGAAGCCTTCGGGCTCGGAGCCGGGGTCAGCGGCATGGGCCACCCTGGGACGAGGGCTCTTCGCTGGGTCCCATGAGGATCCGCCGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450764.6
CDS GCA 90 bp GCGCAAGGCAAGCCGGCCCCGGGCAGCAGCGGCGGCAACTCGCGCTaGGGCTTCTCCAGAGACTCGCGCGGAAGGAGGGAGCCAAAGAGA +
Preference number: 5 (lower is better)
Translates to: AQGKPAPGSSGGNSR*GFSRDSRGRREPKR
Trigger: TCTCTTTGGCTCCCTCCTTCCGCGCGAGTCTCTGGAGAAGCCGCAGCGCGAGTTGCCGCCGCTGCTGCCCGGGGCCGGCTTGCCTTGCGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592287.5
CDS CCA 90 bp GCTGCAGGACCTGCTGCAGGCCCTGCTCGTCTGGCTGCCAGTCCATaGCGCAAGGCAAGCTGCGGAGGTAGGGGCCGGGGTCAGCGCTGG +
Preference number: 5 (lower is better)
Translates to: AAGPAAGPARLAASP*RKASCGGRGRGQRW
Trigger: CCAGCGCTGACCCCGGCCCCTACCTCCGCAGCTTGCCTTGCGCCATGGACTGGCAGCCAGACGAGCAGGGCCTGCAGCAGGTCCTGCAGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450764.6
CDS CCA 90 bp CCGGGTCTGTCTGTCTGCCTGTCGAGGTCACGGCCACGTCCCGGCTaGTTGAGGTGGTGGCCTACAGAGTCGGCCAGGGTGCCAATGGCG +
Preference number: 5 (lower is better)
Translates to: PGLSVCLSRSRPRPG*LRWWPTESARVPMA
Trigger: CGCCATTGGCACCCTGGCCGACTCTGTAGGCCACCACCTCAACCAGCCGGGACGTGGCCGTGACCTCGACAGGCAGACAGACAGACCCGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589572.5
CDS-3UTR CAA 90 bp CATGGTGGCCCCACCCACCTGCCAGGAGGGCAAGTGGACGGATGGACGGACGGACCACTGGCCCTCTTCTaGAGGAGCCCCGACATGGCC +
Preference number: 5 (lower is better)
Translates to: HGGPTHLPGGQVDGWTDGPLALF*RSPDMA
Trigger: GGCCATGTCGGGGCTCCTCAAGAAGAGGGCCAGTGG...TCCGTCCGTCCATCCGTCCACTTGCCCTCCTGGCAGGTGGGTGGGGCCACCATG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356861.9
CDS-3UTR CAA 90 bp CTGCCAGGAGGGCAAGTGGACGGATGGACGGACGGACGGACGGACGGGGAAGGCGGCGACTGTGAGTCTTaGAGCAGCTGCAGGACCTGC +
Preference number: 5 (lower is better)
Translates to: LPGGQVDGWTDGRTDGEGGDCES*SSCRTC
Trigger: GCAGGTCCTGCAGCTGCTCAAAGACTCACAGTCGCC...GCCTTCCCCGTCCGTCCGTCCGTCCGTCCATCCGTCCACTTGCCCTCCTGGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR CAA 90 bp CATGGTGGCCCCACCCACCTGCCAGGAGGGCAAGTGGACGGATGGACGGACGGAGCGTGGGACCGGATCTaGGGACTGCAGTGCTTGAAG +
Preference number: 5 (lower is better)
Translates to: HGGPTHLPGGQVDGWTDGAWDRI*GLQCLK
Trigger: CTTCAAGCACTGCAGTCCCAAGATCCGGTCCCACGC...TCCGTCCGTCCATCCGTCCACTTGCCCTCCTGGCAGGTGGGTGGGGCCACCATG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR CAA 90 bp CTGCCAGGAGGGCAAGTGGACGGATGGACGGACGGACGGACGGACGGGGAAGGCGTGACCGTGCGTGACTaGTGGAAGCGTGGCTTGATG +
Preference number: 5 (lower is better)
Translates to: LPGGQVDGWTDGRTDGEGVTVRD*WKRGLM
Trigger: CATCAAGCCACGCTTCCACAAGTCACGCACGGTCAC...GCCTTCCCCGTCCGTCCGTCCGTCCGTCCATCCGTCCACTTGCCCTCCTGGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR CAA 90 bp CTGCCAGGAGGGCAAGTGGACGGATGGACGGACGGACGGACGGACGGGGAAGGCTGGATGAAGCAGGCTTaGGTGAGGTCTCCCAGGAGG +
Preference number: 5 (lower is better)
Translates to: LPGGQVDGWTDGRTDGEGWMKQA*VRSPRR
Trigger: CCTCCTGGGAGACCTCACCAAAGCCTGCTTCATCCA...GCCTTCCCCGTCCGTCCGTCCGTCCGTCCATCCGTCCACTTGCCCTCCTGGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR CAA 90 bp CTGCCAGGAGGGCAAGTGGACGGATGGACGGACGGACGGACGGACGGGGAAGGCGCCCAGGTGGCGTTGTaGCAGACGGAGATGAACTCT +
Preference number: 5 (lower is better)
Translates to: LPGGQVDGWTDGRTDGEGAQVAL*QTEMNS
Trigger: AGAGTTCATCTCCGTCTGCAACAACGCCACCTGGGC...GCCTTCCCCGTCCGTCCGTCCGTCCGTCCATCCGTCCACTTGCCCTCCTGGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS TCA 90 bp GGAGCCATCAGGCCGCTCAGCCTCGTGGGGCAGTGTGACCGTGCGTaGCTTGTGGAAGCGTGGCTTGATGTCCTGCTCACTGTCGGGGAC +
Preference number: 5 (lower is better)
Translates to: GAIRPLSLVGQCDRA*LVEAWLDVLLTVGD
Trigger: GTCCCCGACAGTGAGCAGGACATCAAGCCACGCTTCCACAAGTCACGCACGGTCACACTGCCCCACGAGGCTGAGCGGCCTGATGGCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000356861.9
ENST00000425528.6
ENST00000450764.6
ENST00000585886.5
ENST00000588151.5
ENST00000588216.5
ENST00000592287.5
CDS TCA 90 bp GTCTGTCTGTCTGCCTGTCGAGGTCACGGCCACGTCCCGGCTGGTTaGGGTGGTGGCCTACAGAGTCGGCCAGGGTGCCAATGGCGTCAT +
Preference number: 5 (lower is better)
Translates to: VCLSACRGHGHVPAG*GGGLQSRPGCQWRH
Trigger: ATGACGCCATTGGCACCCTGGCCGACTCTGTAGGCCACCACCTCAACCAGCCGGGACGTGGCCGTGACCTCGACAGGCAGACAGACAGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589572.5
CDS CCA 90 bp TCGTCATCCTCCGCGTCCTCGGAGCCATCAGGCCGCTCAGCCTCGTaGGGCAGTGTGACCGTGCGTGACTTGTGGAAGCGTGGCTTGATG +
Preference number: 5 (lower is better)
Translates to: SSSSASSEPSGRSAS*GSVTVRDLWKRGLM
Trigger: CATCAAGCCACGCTTCCACAAGTCACGCACGGTCACACTGCCCCACGAGGCTGAGCGGCCTGATGGCTCCGAGGACGCGGAGGATGACGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000356861.9
ENST00000425528.6
ENST00000450764.6
ENST00000585886.5
ENST00000588151.5
ENST00000588216.5
ENST00000589956.5
ENST00000592287.5
CDS CCA 90 bp GCGCCCAGCACCAGGATGCCCGACTCCTTGACCACCCACTCGGGGTaGAAGAGGAGGCCTTTGAGTAGTGGGAGTAGGTGGGGCAGCAGT +
Preference number: 5 (lower is better)
Translates to: APSTRMPDSLTTHSG*KRRPLSSGSRWGSS
Trigger: ACTGCTGCCCCACCTACTCCCACTACTCAAAGGCCTCCTCTTCCACCCCGAGTGGGTGGTCAAGGAGTCGGGCATCCTGGTGCTGGGCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356861.9
ENST00000425528.6
ENST00000450764.6
ENST00000585886.5
ENST00000588216.5
ENST00000592287.5
CDS-3UTR CAA 90 bp GACGGACGGACGGACGGACGGGGAAGGCATCTGGATTTGAGTCCCACTCACTCCGAGGCCAGGACTTCCTaGCAGATGGGCTGCTCGGCC +
Preference number: 5 (lower is better)
Translates to: DGRTDGRGRHLDLSPTHSEARTS*QMGCSA
Trigger: GGCCGAGCAGCCCATCTGCAAGGAAGTCCTGGCCTC...GGAGTGAGTGGGACTCAAATCCAGATGCCTTCCCCGTCCGTCCGTCCGTCCGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR CAA 90 bp CCTGCCAGGAGGGCAAGTGGACGGATGGACGGACGGACGGACGGACGGGGAAGGGAGTCCTTCTCCTCGTaGTCCCTGATGTTCCTGAGG +
Preference number: 5 (lower is better)
Translates to: PARRASGRMDGRTDGRGRESFSS*SLMFLR
Trigger: CCTCAGGAACATCAGGGACAACGAGGAGAAGGACTC...CCTTCCCCGTCCGTCCGTCCGTCCGTCCATCCGTCCACTTGCCCTCCTGGCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000589149.5
CDS TCA 90 bp TGGGTGCCACCTCCTGGGGGCACACGTAGCCCAAGCGGCCGATGGTaGTGGCTGGAATGGCAGAGGGACTCGTCAGGCGACCTGTGTTTT +
Preference number: 5 (lower is better)
Translates to: WVPPPGGTRSPSGRW*WLEWQRDSSGDLCF
Trigger: AAAACACAGGTCGCCTGACGAGTCCCTCTGCCATTCCAGCCATCACCATCGGCCGCTTGGGCTACGTGTGCCCCCAGGAGGTGGCACCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000425528.6
ENST00000592287.5
CDS TCA 90 bp GGAGCCATCAGGCCGCTCAGCCTCGTGGGGCAGTGTGACCGTGCGTaGCTTGTGGAAGCGTGGCTTGATGTCCTGCTCACCTTGGAAGCG +
Preference number: 5 (lower is better)
Translates to: GAIRPLSLVGQCDRA*LVEAWLDVLLTLEA
Trigger: CGCTTCCAAGGTGAGCAGGACATCAAGCCACGCTTCCACAAGTCACGCACGGTCACACTGCCCCACGAGGCTGAGCGGCCTGATGGCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589956.5
CDS CCA 90 bp TCAGGCCGCTCAGCCTCGTGGGGCAGTGTGACCGTGCGTGACTTGTaGAAGCGTGGCTTGATGTCCTGCTCACTGTCGGGGACAGCCTCA +
Preference number: 5 (lower is better)
Translates to: SGRSASWGSVTVRDL*KRGLMSCSLSGTAS
Trigger: TGAGGCTGTCCCCGACAGTGAGCAGGACATCAAGCCACGCTTCCACAAGTCACGCACGGTCACACTGCCCCACGAGGCTGAGCGGCCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000356861.9
ENST00000425528.6
ENST00000450764.6
ENST00000585886.5
ENST00000588151.5
ENST00000588216.5
ENST00000592287.5
CDS-3UTR CAA 90 bp GGATGCAGCGCACTCCCCAGTAATCCCTCCGACGACGACGCAGACAGAAACCTGGAGGCCAGGACTTCCTaGCAGATGGGCTGCTCGGCC +
Preference number: 5 (lower is better)
Translates to: GCSALPSNPSDDDADRNLEARTS*QMGCSA
Trigger: GGCCGAGCAGCCCATCTGCAAGGAAGTCCTGGCCTC...CAGGTTTCTGTCTGCGTCGTCGTCGGAGGGATTACTGGGGAGTGCGCTGCATCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000592287.5
CDS-3UTR CAA 90 bp ACTTCCGGATGCAGCGCACTCCCCAGTAATCCCTCCGACGACGACGCAGACAGAAGGATGCCCGACTCCTaGACCACCCACTCGGGGTGG +
Preference number: 5 (lower is better)
Translates to: TSGCSALPSNPSDDDADRRMPDS*TTHSGW
Trigger: CCACCCCGAGTGGGTGGTCAAGGAGTCGGGCATCCT...TCTGTCTGCGTCGTCGTCGGAGGGATTACTGGGGAGTGCGCTGCATCCGGAAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000592287.5
CDS-3UTR CAA 90 bp GGATGCAGCGCACTCCCCAGTAATCCCTCCGACGACGACGCAGACAGAAACCTGAGGATGCCCGACTCCTaGACCACCCACTCGGGGTGG +
Preference number: 5 (lower is better)
Translates to: GCSALPSNPSDDDADRNLRMPDS*TTHSGW
Trigger: CCACCCCGAGTGGGTGGTCAAGGAGTCGGGCATCCT...CAGGTTTCTGTCTGCGTCGTCGTCGGAGGGATTACTGGGGAGTGCGCTGCATCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000592287.5
CDS-3UTR CAA 90 bp CAGGGCACAGCGACTTCCGGATGCAGCGCACTCCCCAGTAATCCCTCCGACGACGAGCAGCGGCGGGAATaGCTCAGAGAACTGCTGCCA +
Preference number: 5 (lower is better)
Translates to: QGTATSGCSALPSNPSDDEQRRE*LRELLP
Trigger: TGGCAGCAGTTCTCTGAGCAATTCCCGCCGCTGCTC...GTCGTCGGAGGGATTACTGGGGAGTGCGCTGCATCCGGAAGTCGCTGTGCCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000589149.5
ENST00000592287.5
CDS CCA 90 bp GGGGGCATCAGCTTCTGGATGTATTCCTGGAGAGGGAGCACGAAATaGGCGCTCCCTGGGTCGGGGTGGCAGACTGTGACTCAGGTACCG +
Preference number: 5 (lower is better)
Translates to: GGISFWMYSWRGSTK*ALPGSGWQTVTQVP
Trigger: CGGTACCTGAGTCACAGTCTGCCACCCCGACCCAGGGAGCGCCCATTTCGTGCTCCCTCTCCAGGAATACATCCAGAAGCTGATGCCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000588491.1
CDS CCA 90 bp TCAGGCCGCTCAGCCTCGTGGGGCAGTGTGACCGTGCGTGACTTGTaGAAGCGTGGCTTGATGTCCTGCTCACCTTGGAAGCGATGGTGG +
Preference number: 5 (lower is better)
Translates to: SGRSASWGSVTVRDL*KRGLMSCSPWKRWW
Trigger: CCACCATCGCTTCCAAGGTGAGCAGGACATCAAGCCACGCTTCCACAAGTCACGCACGGTCACACTGCCCCACGAGGCTGAGCGGCCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589956.5
CDS CCA 90 bp CTGGGTGTACATCTAGACACAGATGCCGACAGGGGCACGGGTAAGTaGAGCAGGCCCGAGGCAGGCCAATGCAGAAGCACAGGTGACGGG +
Preference number: 5 (lower is better)
Translates to: LGVHLDTDADRGTGK*SRPEAGQCRSTGDG
Trigger: CCCGTCACCTGTGCTTCTGCATTGGCCTGCCTCGGGCCTGCTCCACTTACCCGTGCCCCTGTCGGCATCTGTGTCTAGATGTACACCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587068.1
CDS-3UTR CAA 90 bp ATGATGAACTGGTTCACGCAGGCGATGGCGTGGGACCGGATCTTGGGACTGCAGCCACTGGCCCTCTTCTaGAGGAGCCCCGACATGGCC +
Preference number: 5 (lower is better)
Translates to: MMNWFTQAMAWDRILGLQPLALF*RSPDMA
Trigger: GGCCATGTCGGGGCTCCTCAAGAAGAGGGCCAGTGG...CTGCAGTCCCAAGATCCGGTCCCACGCCATCGCCTGCGTGAACCAGTTCATCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586775.5
CDS-3UTR CAA 90 bp CAGGGCACAGCGACTTCCGGATGCAGCGCACTCCCCAGTAATCCCTCCGACGACATGTTGAGGGGCCTGTaGAGGGCGTCACTGTCCAGA +
Preference number: 5 (lower is better)
Translates to: QGTATSGCSALPSNPSDDMLRGL*RASLSR
Trigger: TCTGGACAGTGACGCCCTCAACAGGCCCCTCAACAT...GTCGTCGGAGGGATTACTGGGGAGTGCGCTGCATCCGGAAGTCGCTGTGCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000592287.5
CDS-3UTR CAA 90 bp AGGGCACAGCGACTTCCGGATGCAGCGCACTCCCCAGTAATCCCTCCGACGACGTTGGGGATCATGATGTaGAGGGGCCTGTTGAGGGCG +
Preference number: 5 (lower is better)
Translates to: RAQRLPDAAHSPVIPPTTLGIMM*RGLLRA
Trigger: CGCCCTCAACAGGCCCCTCAACATCATGATCCCCAA...CGTCGTCGGAGGGATTACTGGGGAGTGCGCTGCATCCGGAAGTCGCTGTGCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000592287.5
CDS-3UTR CAA 90 bp CGGACGGACGGACGGACGGGGAAGGCATCTGGATTTGAGTCCCACTCACTCCTCTCCTCCCGGAAGACATaGGCGAGGACGTCCAGTGCA +
Preference number: 5 (lower is better)
Translates to: RTDGRTGKASGFESHSLLSSRKT*ARTSSA
Trigger: TGCACTGGACGTCCTCGCCAATGTCTTCCGGGAGGA...GAGGAGTGAGTGGGACTCAAATCCAGATGCCTTCCCCGTCCGTCCGTCCGTCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR CAA 90 bp GTGGGTCCCAAGCATGTGCGTGCTGACAGGGCGACTCCCAAGGTCACCATCCTCTCTGTCATCAGGGGCTaGAGGTGCATGTCGGGTGGC +
Preference number: 5 (lower is better)
Translates to: VGPKHVRADRATPKVTILSVIRG*RCMSGG
Trigger: GCCACCCGACATGCACCTCAAGCCCCTGATGACAGA...GAGGATGGTGACCTTGGGAGTCGCCCTGTCAGCACGCACATGCTTGGGACCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR CAA 90 bp AGGGCACAGCGACTTCCGGATGCAGCGCACTCCCCAGTAATCCCTCCGACGACGATGGCCCAGGTGGCGTaGTTGCAGACGGAGATGAAC +
Preference number: 5 (lower is better)
Translates to: RAQRLPDAAHSPVIPPTTMAQVA*LQTEMN
Trigger: GTTCATCTCCGTCTGCAACAACGCCACCTGGGCCAT...CGTCGTCGGAGGGATTACTGGGGAGTGCGCTGCATCCGGAAGTCGCTGTGCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000592287.5
CDS GCA 90 bp GGCAGTGTGACCGTGCGTGACTTGTGGAAGCGTGGCTTGATGTCCTaGTCACTGTCGGGGACAGCCTCATCCTCCTCCACATCCCCCTTG +
Preference number: 5 (lower is better)
Translates to: GSVTVRDLWKRGLMS*SLSGTASSSSTSPL
Trigger: CAAGGGGGATGTGGAGGAGGATGAGGCTGTCCCCGACAGTGAGCAGGACATCAAGCCACGCTTCCACAAGTCACGCACGGTCACACTGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000356861.9
ENST00000425528.6
ENST00000450764.6
ENST00000585886.5
ENST00000588151.5
ENST00000588216.5
ENST00000592287.5
CDS CCA 90 bp CTTCTGGATGTATTCCTGGAGAGGGAGCACGAAATGGGCGCTCCCTaGGTCGGGGTGGCAGACTGTGACTCAGGTACCGGCTGGTTGAGG +
Preference number: 5 (lower is better)
Translates to: LLDVFLEREHEMGAP*VGVADCDSGTGWLR
Trigger: CCTCAACCAGCCGGTACCTGAGTCACAGTCTGCCACCCCGACCCAGGGAGCGCCCATTTCGTGCTCCCTCTCCAGGAATACATCCAGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588491.1
CDS CCA 90 bp CAGCGGCCCACCTCGATGAAGGTGTCAATATTGTCCATCAGCGCCTaGGCCCGGTCCATGATGAACTGGTTCACGCAGGCGATGGCGTGG +
Preference number: 5 (lower is better)
Translates to: QRPTSMKVSILSISA*ARSMMNWFTQAMAW
Trigger: CCACGCCATCGCCTGCGTGAACCAGTTCATCATGGACCGGGCCCAGGCGCTGATGGACAATATTGACACCTTCATCGAGGTGGGCCGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588484.1
CDS-3UTR CAA 90 bp AGGGCACAGCGACTTCCGGATGCAGCGCACTCCCCAGTAATCCCTCCGACGACGATCTGCAGCTCACCCTaGGAAGCGATGGTGGTGATG +
Preference number: 5 (lower is better)
Translates to: RAQRLPDAAHSPVIPPTTICSSP*EAMVVM
Trigger: CATCACCACCATCGCTTCCAAGGGTGAGCTGCAGAT...CGTCGTCGGAGGGATTACTGGGGAGTGCGCTGCATCCGGAAGTCGCTGTGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000592287.5
CDS-3UTR CAA 90 bp AATGGTGGAGCGGCTGGCCCAGCCTCGCCGGTTATGGCACCCGCACATGCGTGTATGAAGGTGTCAATATaGTCCATCAGCGCCTGGGCC +
Preference number: 5 (lower is better)
Translates to: NGGAAGPASPVMAPAHACMKVSI*SISAWA
Trigger: GGCCCAGGCGCTGATGGACAATATTGACACCTTCAT...ACACGCATGTGCGGGTGCCATAACCGGCGAGGCTGGGCCAGCCGCTCCACCATT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR CAA 90 bp GCAGCGCACTCCCCAGTAATCCCTCCGACGACGACGCAGACAGAAACCTGGCAGGTGACCGTGCGTGACTaGTGGAAGCGTGGCTTGATG +
Preference number: 5 (lower is better)
Translates to: AAHSPVIPPTTTQTETWQVTVRD*WKRGLM
Trigger: CATCAAGCCACGCTTCCACAAGTCACGCACGGTCAC...CTGCCAGGTTTCTGTCTGCGTCGTCGTCGGAGGGATTACTGGGGAGTGCGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000592287.5
CDS-3UTR CAA 90 bp TGCAGCGCACTCCCCAGTAATCCCTCCGACGACGACGCAGACAGAAACCTGGCATCCTCCCGGAAGACATaGGCGAGGACGTCCAGTGCA +
Preference number: 5 (lower is better)
Translates to: CSALPSNPSDDDADRNLASSRKT*ARTSSA
Trigger: TGCACTGGACGTCCTCGCCAATGTCTTCCGGGAGGA...TGCCAGGTTTCTGTCTGCGTCGTCGTCGGAGGGATTACTGGGGAGTGCGCTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000592287.5
CDS-3UTR CAA 90 bp TCCGGATGCAGCGCACTCCCCAGTAATCCCTCCGACGACGACGCAGACAGAAACTCCTCCCGGAAGACATaGGCGAGGACGTCCAGTGCA +
Preference number: 5 (lower is better)
Translates to: SGCSALPSNPSDDDADRNSSRKT*ARTSSA
Trigger: TGCACTGGACGTCCTCGCCAATGTCTTCCGGGAGGA...GTTTCTGTCTGCGTCGTCGTCGGAGGGATTACTGGGGAGTGCGCTGCATCCGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000592287.5
CDS-3UTR CAA 90 bp GGATGCAGCGCACTCCCCAGTAATCCCTCCGACGACGACGCAGACAGAAACCTGTCTGTCATCAGGGGCTaGAGGTGCATGTCGGGTGGC +
Preference number: 5 (lower is better)
Translates to: GCSALPSNPSDDDADRNLSVIRG*RCMSGG
Trigger: GCCACCCGACATGCACCTCAAGCCCCTGATGACAGA...CAGGTTTCTGTCTGCGTCGTCGTCGGAGGGATTACTGGGGAGTGCGCTGCATCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000592287.5
CDS-3UTR CAA 90 bp GGCACAGCGACTTCCGGATGCAGCGCACTCCCCAGTAATCCCTCCGACGACGACATGTATTCCGGCTGGTaGAGGTGGTGGCCTACAGAG +
Preference number: 5 (lower is better)
Translates to: GTATSGCSALPSNPSDDDMYSGW*RWWPTE
Trigger: CTCTGTAGGCCACCACCTCAACCAGCCGGAATACAT...GTCGTCGTCGGAGGGATTACTGGGGAGTGCGCTGCATCCGGAAGTCGCTGTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000592287.5
CDS-3UTR CAA 90 bp GCAGCGCACTCCCCAGTAATCCCTCCGACGACGACGCAGACAGAAACCTGGCAGTGGATGAAGCAGGCTTaGGTGAGGTCTCCCAGGAGG +
Preference number: 5 (lower is better)
Translates to: AAHSPVIPPTTTQTETWQWMKQA*VRSPRR
Trigger: CCTCCTGGGAGACCTCACCAAAGCCTGCTTCATCCA...CTGCCAGGTTTCTGTCTGCGTCGTCGTCGGAGGGATTACTGGGGAGTGCGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000592287.5
CDS-3UTR CAA 90 bp ACAGCGACTTCCGGATGCAGCGCACTCCCCAGTAATCCCTCCGACGACGACGCAGCCCAGGTGGCGTTGTaGCAGACGGAGATGAACTCT +
Preference number: 5 (lower is better)
Translates to: TATSGCSALPSNPSDDDAAQVAL*QTEMNS
Trigger: AGAGTTCATCTCCGTCTGCAACAACGCCACCTGGGC...TGCGTCGTCGTCGGAGGGATTACTGGGGAGTGCGCTGCATCCGGAAGTCGCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000592287.5
CDS-3UTR CAA 90 bp CAGGGCACAGCGACTTCCGGATGCAGCGCACTCCCCAGTAATCCCTCCGACGACGAGTCCTTCTCCTCGTaGTCCCTGATGTTCCTGAGG +
Preference number: 5 (lower is better)
Translates to: QGTATSGCSALPSNPSDDESFSS*SLMFLR
Trigger: CCTCAGGAACATCAGGGACAACGAGGAGAAGGACTC...GTCGTCGGAGGGATTACTGGGGAGTGCGCTGCATCCGGAAGTCGCTGTGCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000589149.5
ENST00000592287.5
CDS-3UTR CAA 90 bp GGATGCAGCGCACTCCCCAGTAATCCCTCCGACGACGACGCAGACAGAAACCTGGAGCAGCGGCGGGAATaGCTCAGAGAACTGCTGCCA +
Preference number: 5 (lower is better)
Translates to: GCSALPSNPSDDDADRNLEQRRE*LRELLP
Trigger: TGGCAGCAGTTCTCTGAGCAATTCCCGCCGCTGCTC...CAGGTTTCTGTCTGCGTCGTCGTCGGAGGGATTACTGGGGAGTGCGCTGCATCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000589149.5
ENST00000592287.5
CDS-3UTR CAA 90 bp CATGCACTGGAACAGCAATGTCATGATGTTGCTGCGGGCCACCAGCTGCTCCACCCACGTCCCGGCTGGTaGAGGTGGTGGCCTACAGAG +
Preference number: 5 (lower is better)
Translates to: HALEQQCHDVAAGHQLLHPRPGW*RWWPTE
Trigger: CTCTGTAGGCCACCACCTCAACCAGCCGGGACGTGG...GTGGAGCAGCTGGTGGCCCGCAGCAACATCATGACATTGCTGTTCCAGTGCATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589572.5
CDS CCA 90 bp ATGTATTCCACGCTGTCTCATAACTGTCTTTCTCCCCCACTAGACTaGGAGCAGGGCGAGGGCGGGGCCGGGTCTGTCTGTCTGCCTGTC +
Preference number: 5 (lower is better)
Translates to: MYSTLSHNCLSPPLD*EQGEGGAGSVCLPV
Trigger: GACAGGCAGACAGACAGACCCGGCCCCGCCCTCGCCCTGCTCCCAGTCTAGTGGGGGAGAAAGACAGTTATGAGACAGCGTGGAATACAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000589572.5
CDS-3UTR CAA 90 bp TGCAGCGCACTCCCCAGTAATCCCTCCGACGACGACGCAGACAGAAACCTGGCAATGTTGAGGGGCCTGTaGAGGGCGTCACTGTCCAGA +
Preference number: 5 (lower is better)
Translates to: CSALPSNPSDDDADRNLAMLRGL*RASLSR
Trigger: TCTGGACAGTGACGCCCTCAACAGGCCCCTCAACAT...TGCCAGGTTTCTGTCTGCGTCGTCGTCGGAGGGATTACTGGGGAGTGCGCTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000592287.5
CDS-3UTR CAA 90 bp GCACTCCCCAGTAATCCCTCCGACGACGACGCAGACAGAAACCTGGCAGTCTCCTTGGGGATCATGATGTaGAGGGGCCTGTTGAGGGCG +
Preference number: 5 (lower is better)
Translates to: ALPSNPSDDDADRNLAVSLGIMM*RGLLRA
Trigger: CGCCCTCAACAGGCCCCTCAACATCATGATCCCCAA...GGAGACTGCCAGGTTTCTGTCTGCGTCGTCGTCGGAGGGATTACTGGGGAGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000592287.5
CDS-3UTR CAA 90 bp CGCACCTCGGGGTCATCATCCACAGCCAGGGCAAATAGGTGCTCGATGAAGGTGGCGTGGGACCGGATCTaGGGACTGCAGTGCTTGAAG +
Preference number: 5 (lower is better)
Translates to: RTSGSSSTARANRCSMKVAWDRI*GLQCLK
Trigger: CTTCAAGCACTGCAGTCCCAAGATCCGGTCCCACGC...CACCTTCATCGAGCACCTATTTGCCCTGGCTGTGGATGATGACCCCGAGGTGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586775.5
CDS-3UTR CAA 90 bp AGGATCTCTGGGCTCACTGGGTACTATGATGAGCAGGAAGTCCCAGGGAGATGGGAGGCCAGGACTTCCTaGCAGATGGGCTGCTCGGCC +
Preference number: 5 (lower is better)
Translates to: RISGLTGYYDEQEVPGRWEARTS*QMGCSA
Trigger: GGCCGAGCAGCCCATCTGCAAGGAAGTCCTGGCCTC...CCATCTCCCTGGGACTTCCTGCTCATCATAGTACCCAGTGAGCCCAGAGATCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR CAA 90 bp GGGTTCACTAATTCTACTGTCTCCATGCAGTCGGGGAAATGGTGGAGCGGCTGGAGGATGCCCGACTCCTaGACCACCCACTCGGGGTGG +
Preference number: 5 (lower is better)
Translates to: GFTNSTVSMQSGKWWSGWRMPDS*TTHSGW
Trigger: CCACCCCGAGTGGGTGGTCAAGGAGTCGGGCATCCT...CCAGCCGCTCCACCATTTCCCCGACTGCATGGAGACAGTAGAATTAGTGAACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR CAA 90 bp TGTGTAATTCCTCCCTCCCACGTAGCTGGCCCAAGTGGGCTGCCAGAGATGACCTCTGTCATCAGGGGCTaGAGGTGCATGTCGGGTGGC +
Preference number: 5 (lower is better)
Translates to: CVIPPSHVAGPSGLPEMTSVIRG*RCMSGG
Trigger: GCCACCCGACATGCACCTCAAGCCCCTGATGACAGA...GGTCATCTCTGGCAGCCCACTTGGGCCAGCTACGTGGGAGGGAGGAATTACACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR CAA 90 bp GAACAGCAATGTCATGATGTTGCTGCGGGCCACCAGCTGCTCCACGTGACCACCTCTGTCATCAGGGGCTaGAGGTGCATGTCGGGTGGC +
Preference number: 5 (lower is better)
Translates to: EQQCHDVAAGHQLLHVTTSVIRG*RCMSGG
Trigger: GCCACCCGACATGCACCTCAAGCCCCTGATGACAGA...GGTGGTCACGTGGAGCAGCTGGTGGCCCGCAGCAACATCATGACATTGCTGTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588491.1
CDS-3UTR CAA 90 bp GACGGACGGACGGACGGACGGGGAAGGCATCTGGATTTGAGTCCCACTCACTCCATGTATTCCGGCTGGTaGAGGTGGTGGCCTACAGAG +
Preference number: 5 (lower is better)
Translates to: DGRTDGRGRHLDLSPTHSMYSGW*RWWPTE
Trigger: CTCTGTAGGCCACCACCTCAACCAGCCGGAATACAT...GGAGTGAGTGGGACTCAAATCCAGATGCCTTCCCCGTCCGTCCGTCCGTCCGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR CAA 90 bp CAGGGCACAGCGACTTCCGGATGCAGCGCACTCCCCAGTAATCCCTCCGACGACACGATCATGAAGTCCTaGTCGGGAGCCTCATACTGC +
Preference number: 5 (lower is better)
Translates to: QGTATSGCSALPSNPSDDTIMKS*SGASYC
Trigger: GCAGTATGAGGCTCCCGACAAGGACTTCATGATCGT...GTCGTCGGAGGGATTACTGGGGAGTGCGCTGCATCCGGAAGTCGCTGTGCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000592287.5
CDS-3UTR CAA 90 bp CTCGGCCAGGCCGCTGAGCAGATCCAGTGCTACGATCATGAAGTCCTTGTCGGGAGCAATGTCATGATGTaGCTGCGGGCCACCAGCTGC +
Preference number: 5 (lower is better)
Translates to: LGQAAEQIQCYDHEVLVGSNVMM*LRATSC
Trigger: GCAGCTGGTGGCCCGCAGCAACATCATGACATTGCT...CCCGACAAGGACTTCATGATCGTAGCACTGGATCTGCTCAGCGGCCTGGCCGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588491.1
ENST00000589572.5
CDS-3UTR CAA 90 bp GGATGCAGCGCACTCCCCAGTAATCCCTCCGACGACGACGCAGACAGAAACCTGAGCAATGTCATGATGTaGCTGCGGGCCACCAGCTGC +
Preference number: 5 (lower is better)
Translates to: GCSALPSNPSDDDADRNLSNVMM*LRATSC
Trigger: GCAGCTGGTGGCCCGCAGCAACATCATGACATTGCT...CAGGTTTCTGTCTGCGTCGTCGTCGGAGGGATTACTGGGGAGTGCGCTGCATCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000592287.5
CDS-3UTR CAA 90 bp CCACGTAGCTGGCCCAAGTGGGCTGCCAGAGATGACCCTATTAGAGCCCAGGGGAACTCTGGGTTCAGGTaGGTGCCCAGAATGGGCATG +
Preference number: 5 (lower is better)
Translates to: PRSWPKWAARDDPIRAQGNSGFR*VPRMGM
Trigger: CATGCCCATTCTGGGCACCAACCTGAACCCAGAGTT...CCCCTGGGCTCTAATAGGGTCATCTCTGGCAGCCCACTTGGGCCAGCTACGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR CAA 90 bp ACAGCGACTTCCGGATGCAGCGCACTCCCCAGTAATCCCTCCGACGACGACGCAAACTCTGGGTTCAGGTaGGTGCCCAGAATGGGCATG +
Preference number: 5 (lower is better)
Translates to: TATSGCSALPSNPSDDDANSGFR*VPRMGM
Trigger: CATGCCCATTCTGGGCACCAACCTGAACCCAGAGTT...TGCGTCGTCGTCGGAGGGATTACTGGGGAGTGCGCTGCATCCGGAAGTCGCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000592287.5
CDS-3UTR CAA 90 bp TGTGTAATTCCTCCCTCCCACGTAGCTGGCCCAAGTGGGCTGCCAGAGATGACCGAGCAGCGGCGGGAATaGCTCAGAGAACTGCTGCCA +
Preference number: 5 (lower is better)
Translates to: CVIPPSHVAGPSGLPEMTEQRRE*LRELLP
Trigger: TGGCAGCAGTTCTCTGAGCAATTCCCGCCGCTGCTC...GGTCATCTCTGGCAGCCCACTTGGGCCAGCTACGTGGGAGGGAGGAATTACACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS TCA 90 bp GCTGGTATTTCCCAAAGGCAAAGACAAGGGTGTCCAGGATGTAGCTaGGGTAGGGCACCAGCTCCGTGCAGGCCTCTTCCTCCAGGGTGG +
Preference number: 5 (lower is better)
Translates to: AGISQRQRQGCPGCS*GRAPAPCRPLPPGW
Trigger: CCACCCTGGAGGAAGAGGCCTGCACGGAGCTGGTGCCCTACCTCAGCTACATCCTGGACACCCTTGTCTTTGCCTTTGGGAAATACCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000356861.9
ENST00000425528.6
ENST00000450764.6
ENST00000585886.5
ENST00000588216.5
ENST00000588491.1
ENST00000592287.5
CDS-3UTR CAA 90 bp CAGGAACTTGGGGATCATGATGTTGAGGGGCCTGTTGAGGGCGTCACTGTCCAGGGCGACTGTGAGTCTTaGAGCAGCTGCAGGACCTGC +
Preference number: 5 (lower is better)
Translates to: QELGDHDVEGPVEGVTVQGDCES*SSCRTC
Trigger: GCAGGTCCTGCAGCTGCTCAAAGACTCACAGTCGCC...CTGGACAGTGACGCCCTCAACAGGCCCCTCAACATCATGATCCCCAAGTTCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586775.5
CDS-3UTR CAA 90 bp CAGGGCACAGCGACTTCCGGATGCAGCGCACTCCCCAGTAATCCCTCCGACGACGGCTCATCTTCTGACTaGAGTCTGGTCAGGACGAAA +
Preference number: 5 (lower is better)
Translates to: QGTATSGCSALPSNPSDDGSSSD*SLVRTK
Trigger: TTTCGTCCTGACCAGACTCAAGTCAGAAGATGAGCC...GTCGTCGGAGGGATTACTGGGGAGTGCGCTGCATCCGGAAGTCGCTGTGCCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000592287.5
CDS-3UTR CAA 90 bp GCACTCCCCAGTAATCCCTCCGACGACGACGCAGACAGAAACCTGGCAGTCTCCATCTGCAGCTCACCCTaGGAAGCGATGGTGGTGATG +
Preference number: 5 (lower is better)
Translates to: ALPSNPSDDDADRNLAVSICSSP*EAMVVM
Trigger: CATCACCACCATCGCTTCCAAGGGTGAGCTGCAGAT...GGAGACTGCCAGGTTTCTGTCTGCGTCGTCGTCGGAGGGATTACTGGGGAGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000592287.5
CDS-3UTR CAA 90 bp GTAATCCTCCGAGTTAAGCAGGTTGCAGAGCTGGGGCAGCAGCTCGGGCCACATTTGGGGATCATGATGTaGAGGGGCCTGTTGAGGGCG +
Preference number: 5 (lower is better)
Translates to: VILRVKQVAELGQQLGPHLGIMM*RGLLRA
Trigger: CGCCCTCAACAGGCCCCTCAACATCATGATCCCCAA...ATGTGGCCCGAGCTGCTGCCCCAGCTCTGCAACCTGCTTAACTCGGAGGATTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000586775.5
ENST00000587654.5
CDS-3UTR CAA 90 bp CACTCCCCAGTAATCCCTCCGACGACGACGCAGACAGAAACCTGGCAGTCTCCATTGGGGATCATGATGTaGAGGGGCCTGTTGAGGGCG +
Preference number: 5 (lower is better)
Translates to: HSPVIPPTTTQTETWQSPLGIMM*RGLLRA
Trigger: CGCCCTCAACAGGCCCCTCAACATCATGATCCCCAA...TGGAGACTGCCAGGTTTCTGTCTGCGTCGTCGTCGGAGGGATTACTGGGGAGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000592287.5
CDS-3UTR CAA 90 bp CTGACCTGCTCCTCCCTCACCTCATCCGAAGCCGGATTCGGTCAGCTGTGTAATGCGTGGGACCGGATCTaGGGACTGCAGTGCTTGAAG +
Preference number: 5 (lower is better)
Translates to: LTCSSLTSSEAGFGQLCNAWDRI*GLQCLK
Trigger: CTTCAAGCACTGCAGTCCCAAGATCCGGTCCCACGC...ATTACACAGCTGACCGAATCCGGCTTCGGATGAGGTGAGGGAGGAGCAGGTCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR CAA 90 bp CCCAGTAATCCCTCCGACGACGACGCAGACAGAAACCTGGCAGTCTCCATGATCGCGTGGGACCGGATCTaGGGACTGCAGTGCTTGAAG +
Preference number: 5 (lower is better)
Translates to: PSNPSDDDADRNLAVSMIAWDRI*GLQCLK
Trigger: CTTCAAGCACTGCAGTCCCAAGATCCGGTCCCACGC...GATCATGGAGACTGCCAGGTTTCTGTCTGCGTCGTCGTCGGAGGGATTACTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000592287.5
CDS-3UTR CAA 90 bp GGACGGATGGACGGACGGACGGACGGACGGGGAAGGCATCTGGATTTGAGTCCCTCCTCCACATCCCCCTaGAGCAGGATGATGTCAATT +
Preference number: 5 (lower is better)
Translates to: GRMDGRTDGRGRHLDLSPSSTSP*SRMMSI
Trigger: AATTGACATCATCCTGCTCAAGGGGGATGTGGAGGA...GGGACTCAAATCCAGATGCCTTCCCCGTCCGTCCGTCCGTCCGTCCATCCGTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR CAA 90 bp GACGGACGGGGAAGGCATCTGGATTTGAGTCCCACTCACTCCTCCCTAACCCCCTTGTGGAAGCGTGGCTaGATGTCCTGCTCACTGTCG +
Preference number: 5 (lower is better)
Translates to: DGRGRHLDLSPTHSSLTPLWKRG*MSCSLS
Trigger: CGACAGTGAGCAGGACATCAAGCCACGCTTCCACAA...GGGGGTTAGGGAGGAGTGAGTGGGACTCAAATCCAGATGCCTTCCCCGTCCGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR CAA 90 bp TGCAGCGCACTCCCCAGTAATCCCTCCGACGACGACGCAGACAGAAACCTGGCATTGTGGAAGCGTGGCTaGATGTCCTGCTCACTGTCG +
Preference number: 5 (lower is better)
Translates to: CSALPSNPSDDDADRNLALWKRG*MSCSLS
Trigger: CGACAGTGAGCAGGACATCAAGCCACGCTTCCACAA...TGCCAGGTTTCTGTCTGCGTCGTCGTCGGAGGGATTACTGGGGAGTGCGCTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000592287.5
CDS-3UTR CAA 90 bp CACTCCCCAGTAATCCCTCCGACGACGACGCAGACAGAAACCTGGCAGTCTCCAGTGACCGTGCGTGACTaGTGGAAGCGTGGCTTGATG +
Preference number: 5 (lower is better)
Translates to: HSPVIPPTTTQTETWQSPVTVRD*WKRGLM
Trigger: CATCAAGCCACGCTTCCACAAGTCACGCACGGTCAC...TGGAGACTGCCAGGTTTCTGTCTGCGTCGTCGTCGGAGGGATTACTGGGGAGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000592287.5
CDS-3UTR CAA 90 bp AAGCCACTCTGCAGGGCGGTGGCCACCGATGACAGACACTCCAGCAGGGGGAAGTCCTTGTCTTCGTCCTaGAGCTCATTCCACTTCTGG +
Preference number: 5 (lower is better)
Translates to: KPLCRAVATDDRHSSRGKSLSSS*SSFHFW
Trigger: CCAGAAGTGGAATGAGCTCAAGGACGAAGACAAGGA...CTTCCCCCTGCTGGAGTGTCTGTCATCGGTGGCCACCGCCCTGCAGAGTGGCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000588491.1
ENST00000589572.5
CDS-3UTR CAA 90 bp CACTCCCCAGTAATCCCTCCGACGACGACGCAGACAGAAACCTGGCAGTCTCCAAGCAATGTCATGATGTaGCTGCGGGCCACCAGCTGC +
Preference number: 5 (lower is better)
Translates to: HSPVIPPTTTQTETWQSPSNVMM*LRATSC
Trigger: GCAGCTGGTGGCCCGCAGCAACATCATGACATTGCT...TGGAGACTGCCAGGTTTCTGTCTGCGTCGTCGTCGGAGGGATTACTGGGGAGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000592287.5
CDS-3UTR CAA 90 bp TCCGGATGCAGCGCACTCCCCAGTAATCCCTCCGACGACGACGCAGACAGAAACTCGGCGATACAGGGCTaGACATGGATGAAGCAGGCT +
Preference number: 5 (lower is better)
Translates to: SGCSALPSNPSDDDADRNSAIQG*TWMKQA
Trigger: AGCCTGCTTCATCCATGTCAAGCCCTGTATCGCCGA...GTTTCTGTCTGCGTCGTCGTCGGAGGGATTACTGGGGAGTGCGCTGCATCCGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000592287.5
CDS-3UTR CAA 90 bp CACTCCCCAGTAATCCCTCCGACGACGACGCAGACAGAAACCTGGCAGTCTCCAATGGCCCAGGTGGCGTaGTTGCAGACGGAGATGAAC +
Preference number: 5 (lower is better)
Translates to: HSPVIPPTTTQTETWQSPMAQVA*LQTEMN
Trigger: GTTCATCTCCGTCTGCAACAACGCCACCTGGGCCAT...TGGAGACTGCCAGGTTTCTGTCTGCGTCGTCGTCGGAGGGATTACTGGGGAGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000592287.5
CDS-3UTR CAA 90 bp CTCCCCAGTAATCCCTCCGACGACGACGCAGACAGAAACCTGGCAGTCTCCATGATGGCCCAGGTGGCGTaGTTGCAGACGGAGATGAAC +
Preference number: 5 (lower is better)
Translates to: LPSNPSDDDADRNLAVSMMAQVA*LQTEMN
Trigger: GTTCATCTCCGTCTGCAACAACGCCACCTGGGCCAT...CATGGAGACTGCCAGGTTTCTGTCTGCGTCGTCGTCGGAGGGATTACTGGGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000592287.5
CDS-3UTR CAA 90 bp GGACGGATGGACGGACGGACGGACGGACGGGGAAGGCATCTGGATTTGAGTCCCGTTATCTTCCCCAACTaGGTCTTTGAAGCCGTGGAG +
Preference number: 5 (lower is better)
Translates to: GRMDGRTDGRGRHLDLSPVIFPN*VFEAVE
Trigger: CTCCACGGCTTCAAAGACCAAGTTGGGGAAGATAAC...GGGACTCAAATCCAGATGCCTTCCCCGTCCGTCCGTCCGTCCGTCCATCCGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000589149.5
CDS-3UTR CAA 90 bp TGCAGCGCACTCCCCAGTAATCCCTCCGACGACGACGCAGACAGAAACCTGGCAGGAGCCCCTTCCACCTaGACCATGTTCCCAGACTAT +
Preference number: 5 (lower is better)
Translates to: CSALPSNPSDDDADRNLAGAPST*TMFPDY
Trigger: ATAGTCTGGGAACATGGTCAAGGTGGAAGGGGCTCC...TGCCAGGTTTCTGTCTGCGTCGTCGTCGGAGGGATTACTGGGGAGTGCGCTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS GCA 90 bp GAGTTAAGCAGGTTGCAGAGCTGGGGCAGCAGCTCGGGCCACATCTaGAGCTCACCCTTGGAAGCGATGGTGGTGATGAGAATGCCAATG +
Preference number: 5 (lower is better)
Translates to: ELSRLQSWGSSSGHI*SSPLEAMVVMRMPM
Trigger: CATTGGCATTCTCATCACCACCATCGCTTCCAAGGGTGAGCTGCAGATGTGGCCCGAGCTGCTGCCCCAGCTCTGCAACCTGCTTAACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000356861.9
ENST00000425528.6
ENST00000450764.6
ENST00000585886.5
ENST00000588216.5
ENST00000588484.1
ENST00000592287.5
CDS GCA 90 bp GCCGCCAGCCTCTCCTTGAGCAGCGGCGGGAATTGCTCAGAGAACTaGTGCCAGTTATCTTCCCCAACTTGGTCTTTGAAGCCGTGGAGA +
Preference number: 5 (lower is better)
Translates to: AASLSLSSGGNCSEN*CQLSSPTWSLKPWR
Trigger: TCTCCACGGCTTCAAAGACCAAGTTGGGGAAGATAACTGGCAGCAGTTCTCTGAGCAATTCCCGCCGCTGCTCAAGGAGAGGCTGGCGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356861.9
ENST00000425528.6
ENST00000450764.6
ENST00000588216.5
ENST00000589149.5
ENST00000592287.5
CDS CCA 90 bp GAGCAGTTGGGATTCCGAGGTAGCCAGTTCCGCTGGACTGAAACCTaGGCTGAGAAACACGTGCAGAAAGCCGCCACCAAGGCATGCGTA +
Preference number: 5 (lower is better)
Translates to: EQLGFRGSQFRWTET*AEKHVQKAATKACV
Trigger: TACGCATGCCTTGGTGGCGGCTTTCTGCACGTGTTTCTCAGCCCAGGTTTCAGTCCAGCGGAACTGGCTACCTCGGAATCCCAACTGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588216.5
CDS CCA 90 bp GACACCCTAAAGGAGCAGTTGGGATTCCGAGGTAGCCAGTTCCGCTaGACTGAAACCTGGGCTGAGAAACACGTGCAGAAAGCCGCCACC +
Preference number: 5 (lower is better)
Translates to: DTLKEQLGFRGSQFR*TETWAEKHVQKAAT
Trigger: GGTGGCGGCTTTCTGCACGTGTTTCTCAGCCCAGGTTTCAGTCCAGCGGAACTGGCTACCTCGGAATCCCAACTGCTCCTTTAGGGTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588216.5
CDS-3UTR CAA 90 bp CTGCCAGGAGGGCAAGTGGACGGATGGACGGACGGACGGACGGACGGGGAAGGCAGGAAACTGATTGAGTaGTTTGAGTTTATCCTGCAC +
Preference number: 5 (lower is better)
Translates to: LPGGQVDGWTDGRTDGEGRKLIE*FEFILH
Trigger: GTGCAGGATAAACTCAAACAACTCAATCAGTTTCCT...GCCTTCCCCGTCCGTCCGTCCGTCCGTCCATCCGTCCACTTGCCCTCCTGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR CAA 90 bp ATGGACGGACGGACGGACGGACGGGGAAGGCATCTGGATTTGAGTCCCACTCACGCCTTCACGTTGTTCTaGAGGATGAGGCCACTGAGA +
Preference number: 5 (lower is better)
Translates to: MDGRTDGRGRHLDLSPTHAFTLF*RMRPLR
Trigger: TCTCAGTGGCCTCATCCTCAAGAACAACGTGAAGGC...GTGAGTGGGACTCAAATCCAGATGCCTTCCCCGTCCGTCCGTCCGTCCGTCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR CAA 90 bp TGCAGCGCACTCCCCAGTAATCCCTCCGACGACGACGCAGACAGAAACCTGGCAGCCTTCACGTTGTTCTaGAGGATGAGGCCACTGAGA +
Preference number: 5 (lower is better)
Translates to: CSALPSNPSDDDADRNLAAFTLF*RMRPLR
Trigger: TCTCAGTGGCCTCATCCTCAAGAACAACGTGAAGGC...TGCCAGGTTTCTGTCTGCGTCGTCGTCGGAGGGATTACTGGGGAGTGCGCTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000592287.5
CDS-3UTR CAA 90 bp AGGGCACAGCGACTTCCGGATGCAGCGCACTCCCCAGTAATCCCTCCGACGACGGCATCGCCAATGTTGTaGAGACACTCCTGTTTGATG +
Preference number: 5 (lower is better)
Translates to: RAQRLPDAAHSPVIPPTTASPML*RHSCLM
Trigger: CATCAAACAGGAGTGTCTCAACAACATTGGCGATGC...CGTCGTCGGAGGGATTACTGGGGAGTGCGCTGCATCCGGAAGTCGCTGTGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000592287.5
CDS-3UTR CAA 90 bp CACTCCCCAGTAATCCCTCCGACGACGACGCAGACAGAAACCTGGCAGTCTCCAATCTGCAGCTCACCCTaGGAAGCGATGGTGGTGATG +
Preference number: 5 (lower is better)
Translates to: HSPVIPPTTTQTETWQSPICSSP*EAMVVM
Trigger: CATCACCACCATCGCTTCCAAGGGTGAGCTGCAGAT...TGGAGACTGCCAGGTTTCTGTCTGCGTCGTCGTCGGAGGGATTACTGGGGAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000592287.5
CDS-3UTR CAA 90 bp ACTTCCGGATGCAGCGCACTCCCCAGTAATCCCTCCGACGACGACGCAGACAGAATGAAGGTGTCAATATaGTCCATCAGCGCCTGGGCC +
Preference number: 5 (lower is better)
Translates to: TSGCSALPSNPSDDDADRMKVSI*SISAWA
Trigger: GGCCCAGGCGCTGATGGACAATATTGACACCTTCAT...TCTGTCTGCGTCGTCGTCGGAGGGATTACTGGGGAGTGCGCTGCATCCGGAAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000592287.5
CDS-3UTR CAA 90 bp GGATGGAGCAGGCCCCAGGATGCGAGACTCCAGTCAGACTCCAAAACACAAGGGTTGTGGAAGCGTGGCTaGATGTCCTGCTCACTGTCG +
Preference number: 5 (lower is better)
Translates to: GWSRPQDARLQSDSKTQGLWKRG*MSCSLS
Trigger: CGACAGTGAGCAGGACATCAAGCCACGCTTCCACAA...CCCTTGTGTTTTGGAGTCTGACTGGAGTCTCGCATCCTGGGGCCTGCTCCATCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR CAA 90 bp ATGGACGGACGGACGGACGGACGGGGAAGGCATCTGGATTTGAGTCCCACTCACACGATCATGAAGTCCTaGTCGGGAGCCTCATACTGC +
Preference number: 5 (lower is better)
Translates to: MDGRTDGRGRHLDLSPTHTIMKS*SGASYC
Trigger: GCAGTATGAGGCTCCCGACAAGGACTTCATGATCGT...GTGAGTGGGACTCAAATCCAGATGCCTTCCCCGTCCGTCCGTCCGTCCGTCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR CAA 90 bp GGACGGATGGACGGACGGACGGACGGACGGGGAAGGCATCTGGATTTGAGTCCCTCCCCAACTTGGTCTTaGAAGCCGTGGAGAATCTTA +
Preference number: 5 (lower is better)
Translates to: GRMDGRTDGRGRHLDLSPSPTWS*KPWRIL
Trigger: TAAGATTCTCCACGGCTTCAAAGACCAAGTTGGGGA...GGGACTCAAATCCAGATGCCTTCCCCGTCCGTCCGTCCGTCCGTCCATCCGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000589149.5
CDS-3UTR CAA 90 bp ACAGCGACTTCCGGATGCAGCGCACTCCCCAGTAATCCCTCCGACGACGACGCAGTTATCTTCCCCAACTaGGTCTTTGAAGCCGTGGAG +
Preference number: 5 (lower is better)
Translates to: TATSGCSALPSNPSDDDAVIFPN*VFEAVE
Trigger: CTCCACGGCTTCAAAGACCAAGTTGGGGAAGATAAC...TGCGTCGTCGTCGGAGGGATTACTGGGGAGTGCGCTGCATCCGGAAGTCGCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000589149.5
ENST00000592287.5
CDS-3UTR CAA 90 bp TCCAGCAGGGGGAAGAGGTCCTTGTCTTCGTCCTTGAGCTCATTCCACTTCTGGTCAGGTACCGGCTGGTaGAGGTGGTGGCCTACAGAG +
Preference number: 5 (lower is better)
Translates to: SSRGKRSLSSSLSSFHFWSGTGW*RWWPTE
Trigger: CTCTGTAGGCCACCACCTCAACCAGCCGGTACCTGA...CCAGAAGTGGAATGAGCTCAAGGACGAAGACAAGGACCTCTTCCCCCTGCTGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000588491.1
CDS CCA 90 bp CCTGTAGCGTCTTGGTTTCCCCTCCCTGCCCTGCCGATAACAAAGTaGGAGACCTCCTGCCACTTGAAGCCTCAGTTTCCCCACTTGTCA +
Preference number: 5 (lower is better)
Translates to: PVASWFPLPALPITK*ETSCHLKPQFPHLS
Trigger: TGACAAGTGGGGAAACTGAGGCTTCAAGTGGCAGGAGGTCTCCCACTTTGTTATCGGCAGGGCAGGGAGGGGAAACCAAGACGCTACAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590781.1
CDS CCA 90 bp TGGGTTAGGGACAAGGCGAGTGTCGTACCGATACAGGGCTTGACATaGATGAAGCAGGCTTTGGTGAGGTCTCCCAGGAGGGCAAAGGAG +
Preference number: 5 (lower is better)
Translates to: WVRDKASVVPIQGLT*MKQALVRSPRRAKE
Trigger: CTCCTTTGCCCTCCTGGGAGACCTCACCAAAGCCTGCTTCATCCATGTCAAGCCCTGTATCGGTACGACACTCGCCTTGTCCCTAACCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587068.1
CDS-3UTR CAA 90 bp GCACTCCCCAGTAATCCCTCCGACGACGACGCAGACAGAAACCTGGCAGTCTCCGGCTCATCTTCTGACTaGAGTCTGGTCAGGACGAAA +
Preference number: 5 (lower is better)
Translates to: ALPSNPSDDDADRNLAVSGSSSD*SLVRTK
Trigger: TTTCGTCCTGACCAGACTCAAGTCAGAAGATGAGCC...GGAGACTGCCAGGTTTCTGTCTGCGTCGTCGTCGGAGGGATTACTGGGGAGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000592287.5
CDS-3UTR CAA 90 bp CACTCCCCAGTAATCCCTCCGACGACGACGCAGACAGAAACCTGGCAGTCTCCAGCCTTCACGTTGTTCTaGAGGATGAGGCCACTGAGA +
Preference number: 5 (lower is better)
Translates to: HSPVIPPTTTQTETWQSPAFTLF*RMRPLR
Trigger: TCTCAGTGGCCTCATCCTCAAGAACAACGTGAAGGC...TGGAGACTGCCAGGTTTCTGTCTGCGTCGTCGTCGGAGGGATTACTGGGGAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000592287.5
CDS-3UTR CAA 90 bp ACAGCGACTTCCGGATGCAGCGCACTCCCCAGTAATCCCTCCGACGACGACGCAGCATCGCCAATGTTGTaGAGACACTCCTGTTTGATG +
Preference number: 5 (lower is better)
Translates to: TATSGCSALPSNPSDDDAASPML*RHSCLM
Trigger: CATCAAACAGGAGTGTCTCAACAACATTGGCGATGC...TGCGTCGTCGTCGGAGGGATTACTGGGGAGTGCGCTGCATCCGGAAGTCGCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000592287.5
CDS-3UTR CAA 90 bp GGTCAGCTGTGTAATTCCTCCCTCCCACGTAGCTGGCCCAAGTGGGCTGCCAGAGAGGCATCGCCAATGTaGTTGAGACACTCCTGTTTG +
Preference number: 5 (lower is better)
Translates to: GQLCNSSLPRSWPKWAAREASPM*LRHSCL
Trigger: CAAACAGGAGTGTCTCAACAACATTGGCGATGCCTC...TCTGGCAGCCCACTTGGGCCAGCTACGTGGGAGGGAGGAATTACACAGCTGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR CAA 90 bp GATGAACTGGTTCACGCAGGCGATGGCGTGGGACCGGATCTTGGGACTGCAGTGGAGGCATCGCCAATGTaGTTGAGACACTCCTGTTTG +
Preference number: 5 (lower is better)
Translates to: DELVHAGDGVGPDLGTAVEASPM*LRHSCL
Trigger: CAAACAGGAGTGTCTCAACAACATTGGCGATGCCTC...CACTGCAGTCCCAAGATCCGGTCCCACGCCATCGCCTGCGTGAACCAGTTCATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586775.5
CDS-3UTR CAA 90 bp GGATGCAGCGCACTCCCCAGTAATCCCTCCGACGACGACGCAGACAGAAACCTGGAGGCATCGCCAATGTaGTTGAGACACTCCTGTTTG +
Preference number: 5 (lower is better)
Translates to: GCSALPSNPSDDDADRNLEASPM*LRHSCL
Trigger: CAAACAGGAGTGTCTCAACAACATTGGCGATGCCTC...CAGGTTTCTGTCTGCGTCGTCGTCGGAGGGATTACTGGGGAGTGCGCTGCATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000592287.5
CDS-3UTR CAA 90 bp GCACTCCCCAGTAATCCCTCCGACGACGACGCAGACAGAAACCTGGCAGTCTCCTTGGGACTGCAGTGCTaGAAGAACTGCAGGAACTTG +
Preference number: 5 (lower is better)
Translates to: ALPSNPSDDDADRNLAVSLGLQC*KNCRNL
Trigger: CAAGTTCCTGCAGTTCTTCAAGCACTGCAGTCCCAA...GGAGACTGCCAGGTTTCTGTCTGCGTCGTCGTCGGAGGGATTACTGGGGAGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000592287.5
CDS-3UTR CAA 90 bp ATCCTCCGAGTTAAGCAGGTTGCAGAGCTGGGGCAGCAGCTCGGGCCACATCTGTTGGGACTGCAGTGCTaGAAGAACTGCAGGAACTTG +
Preference number: 5 (lower is better)
Translates to: ILRVKQVAELGQQLGPHLLGLQC*KNCRNL
Trigger: CAAGTTCCTGCAGTTCTTCAAGCACTGCAGTCCCAA...CAGATGTGGCCCGAGCTGCTGCCCCAGCTCTGCAACCTGCTTAACTCGGAGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586775.5
CDS-3UTR CAA 90 bp GGATGCAGCGCACTCCCCAGTAATCCCTCCGACGACGACGCAGACAGAAACCTGTTGGGACTGCAGTGCTaGAAGAACTGCAGGAACTTG +
Preference number: 5 (lower is better)
Translates to: GCSALPSNPSDDDADRNLLGLQC*KNCRNL
Trigger: CAAGTTCCTGCAGTTCTTCAAGCACTGCAGTCCCAA...CAGGTTTCTGTCTGCGTCGTCGTCGGAGGGATTACTGGGGAGTGCGCTGCATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000592287.5
CDS-3UTR CAA 90 bp CTCCCCAGTAATCCCTCCGACGACGACGCAGACAGAAACCTGGCAGTCTCCATGATGAAGGTGTCAATATaGTCCATCAGCGCCTGGGCC +
Preference number: 5 (lower is better)
Translates to: LPSNPSDDDADRNLAVSMMKVSI*SISAWA
Trigger: GGCCCAGGCGCTGATGGACAATATTGACACCTTCAT...CATGGAGACTGCCAGGTTTCTGTCTGCGTCGTCGTCGGAGGGATTACTGGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000592287.5
CDS-3UTR CAA 90 bp GGTCAGCTGTGTAATTCCTCCCTCCCACGTAGCTGGCCCAAGTGGGCTGCCAGATCCTCCACATCCCCCTaGAGCAGGATGATGTCAATT +
Preference number: 5 (lower is better)
Translates to: GQLCNSSLPRSWPKWAARSSTSP*SRMMSI
Trigger: AATTGACATCATCCTGCTCAAGGGGGATGTGGAGGA...TCTGGCAGCCCACTTGGGCCAGCTACGTGGGAGGGAGGAATTACACAGCTGACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR CAA 90 bp GCACTCCCCAGTAATCCCTCCGACGACGACGCAGACAGAAACCTGGCAGTCTCCTCCTTGTCTTCGTCCTaGAGCTCATTCCACTTCTGG +
Preference number: 5 (lower is better)
Translates to: ALPSNPSDDDADRNLAVSSLSSS*SSFHFW
Trigger: CCAGAAGTGGAATGAGCTCAAGGACGAAGACAAGGA...GGAGACTGCCAGGTTTCTGTCTGCGTCGTCGTCGGAGGGATTACTGGGGAGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000592287.5
CDS-3UTR CAA 90 bp GAACAGCAATGTCATGATGTTGCTGCGGGCCACCAGCTGCTCCACGTGACCACCACGATCATGAAGTCCTaGTCGGGAGCCTCATACTGC +
Preference number: 5 (lower is better)
Translates to: EQQCHDVAAGHQLLHVTTTIMKS*SGASYC
Trigger: GCAGTATGAGGCTCCCGACAAGGACTTCATGATCGT...GGTGGTCACGTGGAGCAGCTGGTGGCCCGCAGCAACATCATGACATTGCTGTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588491.1
ENST00000589572.5
CDS-3UTR CAA 90 bp TCCAGTGCTACGATCATGAAGTCCTTGTCGGGAGCCTCATACTGCTCAGGGTGCAGCAATGTCATGATGTaGCTGCGGGCCACCAGCTGC +
Preference number: 5 (lower is better)
Translates to: SSATIMKSLSGASYCSGCSNVMM*LRATSC
Trigger: GCAGCTGGTGGCCCGCAGCAACATCATGACATTGCT...GCACCCTGAGCAGTATGAGGCTCCCGACAAGGACTTCATGATCGTAGCACTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588491.1
ENST00000589572.5
CDS-3UTR CAA 90 bp AGGATCTCTGGGCTCACTGGGTACTATGATGAGCAGGAAGTCCCAGGGAGATGGTGGATGAAGCAGGCTTaGGTGAGGTCTCCCAGGAGG +
Preference number: 5 (lower is better)
Translates to: RISGLTGYYDEQEVPGRWWMKQA*VRSPRR
Trigger: CCTCCTGGGAGACCTCACCAAAGCCTGCTTCATCCA...CCATCTCCCTGGGACTTCCTGCTCATCATAGTACCCAGTGAGCCCAGAGATCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR CAA 90 bp CCCAGTAATCCCTCCGACGACGACGCAGACAGAAACCTGGCAGTCTCCATGATCTCGGCGATACAGGGCTaGACATGGATGAAGCAGGCT +
Preference number: 5 (lower is better)
Translates to: PSNPSDDDADRNLAVSMISAIQG*TWMKQA
Trigger: AGCCTGCTTCATCCATGTCAAGCCCTGTATCGCCGA...GATCATGGAGACTGCCAGGTTTCTGTCTGCGTCGTCGTCGGAGGGATTACTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000592287.5
CDS-3UTR CAA 90 bp ACAGCGACTTCCGGATGCAGCGCACTCCCCAGTAATCCCTCCGACGACGACGCAATGATTTCCACCAGGTaGTTGAGGACCATCTGCACA +
Preference number: 5 (lower is better)
Translates to: TATSGCSALPSNPSDDDAMISTR*LRTICT
Trigger: TGTGCAGATGGTCCTCAACAACCTGGTGGAAATCAT...TGCGTCGTCGTCGGAGGGATTACTGGGGAGTGCGCTGCATCCGGAAGTCGCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000592287.5
CDS-3UTR CAA 90 bp GACGGACGGGGAAGGCATCTGGATTTGAGTCCCACTCACTCCTCCCTAACCCCCTTTTCCAGCAGTGTCTaGGGTGTGTTGGGTCGGTTA +
Preference number: 5 (lower is better)
Translates to: DGRGRHLDLSPTHSSLTPFSSSV*GVLGRL
Trigger: TAACCGACCCAACACACCCAAGACACTGCTGGAAAA...GGGGGTTAGGGAGGAGTGAGTGGGACTCAAATCCAGATGCCTTCCCCGTCCGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR CAA 90 bp GGATGCAGCGCACTCCCCAGTAATCCCTCCGACGACGACGCAGACAGAAACCTGTTTTCCAGCAGTGTCTaGGGTGTGTTGGGTCGGTTA +
Preference number: 5 (lower is better)
Translates to: GCSALPSNPSDDDADRNLFSSSV*GVLGRL
Trigger: TAACCGACCCAACACACCCAAGACACTGCTGGAAAA...CAGGTTTCTGTCTGCGTCGTCGTCGGAGGGATTACTGGGGAGTGCGCTGCATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000592287.5
CDS-3UTR CAA 90 bp ACAGCGACTTCCGGATGCAGCGCACTCCCCAGTAATCCCTCCGACGACGACGCATCCCCAACTTGGTCTTaGAAGCCGTGGAGAATCTTA +
Preference number: 5 (lower is better)
Translates to: TATSGCSALPSNPSDDDASPTWS*KPWRIL
Trigger: TAAGATTCTCCACGGCTTCAAAGACCAAGTTGGGGA...TGCGTCGTCGTCGGAGGGATTACTGGGGAGTGCGCTGCATCCGGAAGTCGCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000589149.5
ENST00000592287.5
CDS-3UTR CAA 90 bp TGCAGCGCACTCCCCAGTAATCCCTCCGACGACGACGCAGACAGAAACCTGGCAGTTATCTTCCCCAACTaGGTCTTTGAAGCCGTGGAG +
Preference number: 5 (lower is better)
Translates to: CSALPSNPSDDDADRNLAVIFPN*VFEAVE
Trigger: CTCCACGGCTTCAAAGACCAAGTTGGGGAAGATAAC...TGCCAGGTTTCTGTCTGCGTCGTCGTCGGAGGGATTACTGGGGAGTGCGCTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000589149.5
ENST00000592287.5
CDS-3UTR CAA 90 bp ACTATGATGAGCAGGAAGTCCCAGGGAGATGGAATAGGGAACAGGGGACACACCGAGCAGCGGCGGGAATaGCTCAGAGAACTGCTGCCA +
Preference number: 5 (lower is better)
Translates to: TMMSRKSQGDGIGNRGHTEQRRE*LRELLP
Trigger: TGGCAGCAGTTCTCTGAGCAATTCCCGCCGCTGCTC...GGTGTGTCCCCTGTTCCCTATTCCATCTCCCTGGGACTTCCTGCTCATCATAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS GCA 90 bp GCCAGCCTCTCCTTGAGCAGCGGCGGGAATTGCTCAGAGAACTGCTaGCAGTTATCTTCCCCAACTTGGTCTTTGAAGCCGTGGAGAATC +
Preference number: 5 (lower is better)
Translates to: ASLSLSSGGNCSENC*QLSSPTWSLKPWRI
Trigger: GATTCTCCACGGCTTCAAAGACCAAGTTGGGGAAGATAACTGGCAGCAGTTCTCTGAGCAATTCCCGCCGCTGCTCAAGGAGAGGCTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356861.9
ENST00000425528.6
ENST00000450764.6
ENST00000588216.5
ENST00000589149.5
ENST00000592287.5
CDS-3UTR CAA 90 bp ATGTTGAGGGGCCTGTTGAGGGCGTCACTGTCCAGAAGCTCTGATGAGTCTTCAATGTTGAGGGGCCTGTaGAGGGCGTCACTGTCCAGA +
Preference number: 5 (lower is better)
Translates to: MLRGLLRASLSRSSDESSMLRGL*RASLSR
Trigger: TCTGGACAGTGACGCCCTCAACAGGCCCCTCAACAT...TGAAGACTCATCAGAGCTTCTGGACAGTGACGCCCTCAACAGGCCCCTCAACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000586775.5
ENST00000587654.5
CDS-3UTR CAA 90 bp GCCAGGGCAAATAGGTGCTCGATGAAGGTGTCAATATTGTCCATCAGCGCCTGGTTGGGGATCATGATGTaGAGGGGCCTGTTGAGGGCG +
Preference number: 5 (lower is better)
Translates to: ARANRCSMKVSILSISAWLGIMM*RGLLRA
Trigger: CGCCCTCAACAGGCCCCTCAACATCATGATCCCCAA...CCAGGCGCTGATGGACAATATTGACACCTTCATCGAGCACCTATTTGCCCTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586775.5
CDS-3UTR CAA 90 bp GGATGGAGCAGGCCCCAGGATGCGAGACTCCAGTCAGACTCCAAAACACAAGGGTTGGGACTGCAGTGCTaGAAGAACTGCAGGAACTTG +
Preference number: 5 (lower is better)
Translates to: GWSRPQDARLQSDSKTQGLGLQC*KNCRNL
Trigger: CAAGTTCCTGCAGTTCTTCAAGCACTGCAGTCCCAA...CCCTTGTGTTTTGGAGTCTGACTGGAGTCTCGCATCCTGGGGCCTGCTCCATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR CAA 90 bp CACTCCCCAGTAATCCCTCCGACGACGACGCAGACAGAAACCTGGCAGTCTCCATCCTCCACATCCCCCTaGAGCAGGATGATGTCAATT +
Preference number: 5 (lower is better)
Translates to: HSPVIPPTTTQTETWQSPSSTSP*SRMMSI
Trigger: AATTGACATCATCCTGCTCAAGGGGGATGTGGAGGA...TGGAGACTGCCAGGTTTCTGTCTGCGTCGTCGTCGGAGGGATTACTGGGGAGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000592287.5
CDS-3UTR CAA 90 bp CATGCACTGGAACAGCAATGTCATGATGTTGCTGCGGGCCACCAGCTGCTCCACACGATCATGAAGTCCTaGTCGGGAGCCTCATACTGC +
Preference number: 5 (lower is better)
Translates to: HALEQQCHDVAAGHQLLHTIMKS*SGASYC
Trigger: GCAGTATGAGGCTCCCGACAAGGACTTCATGATCGT...GTGGAGCAGCTGGTGGCCCGCAGCAACATCATGACATTGCTGTTCCAGTGCATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588491.1
ENST00000589572.5
CDS-3UTR CAA 90 bp CCCAGTAATCCCTCCGACGACGACGCAGACAGAAACCTGGCAGTCTCCATGATCACGATCATGAAGTCCTaGTCGGGAGCCTCATACTGC +
Preference number: 5 (lower is better)
Translates to: PSNPSDDDADRNLAVSMITIMKS*SGASYC
Trigger: GCAGTATGAGGCTCCCGACAAGGACTTCATGATCGT...GATCATGGAGACTGCCAGGTTTCTGTCTGCGTCGTCGTCGGAGGGATTACTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000592287.5
CDS-3UTR CAA 90 bp GCACTCCCCAGTAATCCCTCCGACGACGACGCAGACAGAAACCTGGCAGTCTCCATGATTTCCACCAGGTaGTTGAGGACCATCTGCACA +
Preference number: 5 (lower is better)
Translates to: ALPSNPSDDDADRNLAVSMISTR*LRTICT
Trigger: TGTGCAGATGGTCCTCAACAACCTGGTGGAAATCAT...GGAGACTGCCAGGTTTCTGTCTGCGTCGTCGTCGGAGGGATTACTGGGGAGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000592287.5
CDS-3UTR CAA 90 bp TCCGGATGCAGCGCACTCCCCAGTAATCCCTCCGACGACGACGCAGACAGAAACATGATTTCCACCAGGTaGTTGAGGACCATCTGCACA +
Preference number: 5 (lower is better)
Translates to: SGCSALPSNPSDDDADRNMISTR*LRTICT
Trigger: TGTGCAGATGGTCCTCAACAACCTGGTGGAAATCAT...GTTTCTGTCTGCGTCGTCGTCGGAGGGATTACTGGGGAGTGCGCTGCATCCGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000592287.5
CDS-3UTR CAA 90 bp ATGCTCGGGGTAGGTGCCAGTAGCTCTGGCTACACCCAGCTCTCTTCAGGAAAAGAGTCCTTCTCCTCGTaGTCCCTGATGTTCCTGAGG +
Preference number: 5 (lower is better)
Translates to: MLGVGASSSGYTQLSSGKESFSS*SLMFLR
Trigger: CCTCAGGAACATCAGGGACAACGAGGAGAAGGACTC...TTTTCCTGAAGAGAGCTGGGTGTAGCCAGAGCTACTGGCACCTACCCCGAGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS TCA 90 bp TCCTTCTTTGCCGTAGGCAAAGTCAGTCCCGGCTCCGTTCATTCATaGAAATCAAGTCCCGGGCCTCCAAGGTTAGGGAAGTGTCGGCAG +
Preference number: 5 (lower is better)
Translates to: SFFAVGKVSPGSVHS*KSSPGPPRLGKCRQ
Trigger: CTGCCGACACTTCCCTAACCTTGGAGGCCCGGGACTTGATTTTCATGAATGAACGGAGCCGGGACTGACTTTGCCTACGGCAAAGAAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000425528.6
ENST00000588216.5
CDS TCA 90 bp CACCGTTTTTCCGTAGGCAAAGTCAGTCCCGGCTCCGTTCATTCATaGAAATCAAGTCCCGGGCCTCCAAGGTTAGGGAAGTGTCGGCAG +
Preference number: 5 (lower is better)
Translates to: HRFSVGKVSPGSVHS*KSSPGPPRLGKCRQ
Trigger: CTGCCGACACTTCCCTAACCTTGGAGGCCCGGGACTTGATTTTCATGAATGAACGGAGCCGGGACTGACTTTGCCTACGGAAAAACGGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000589337.5
CDS GCA 90 bp CTGTTTGATGAAGTCTGCCACAGGGGGTGGGAAGCTCTGATAGTGTaGCTTCACGTTGTTCTTGAGGATGAGGCCACTGAGAGAGCGCGT +
Preference number: 5 (lower is better)
Translates to: LFDEVCHRGWEALIV*LHVVLEDEATERAR
Trigger: ACGCGCTCTCTCAGTGGCCTCATCCTCAAGAACAACGTGAAGGCACACTATCAGAGCTTCCCACCCCCTGTGGCAGACTTCATCAAACAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000356861.9
ENST00000425528.6
ENST00000450764.6
ENST00000585886.5
ENST00000586775.5
ENST00000587654.5
ENST00000588216.5
ENST00000588484.1
ENST00000589956.5
ENST00000592287.5
CDS CCA 90 bp AGGGGGAAGAGGTCCTTGTCTTCGTCCTTGAGCTCATTCCACTTCTaGATCAGTGGGGGCATCAGCTTCTGGATGTATTCCGGCTGGTTG +
Preference number: 5 (lower is better)
Translates to: RGKRSLSSSLSSFHF*ISGGISFWMYSGWL
Trigger: CAACCAGCCGGAATACATCCAGAAGCTGATGCCCCCACTGATCCAGAAGTGGAATGAGCTCAAGGACGAAGACAAGGACCTCTTCCCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000356861.9
ENST00000425528.6
ENST00000450764.6
ENST00000585886.5
ENST00000588216.5
ENST00000592287.5
CDS CCA 90 bp AGGGGGAAGAGGTCCTTGTCTTCGTCCTTGAGCTCATTCCACTTCTaGATCAGTGGGGGCATCAGCTTCTGGATGTATTCCTGGAGAGGG +
Preference number: 5 (lower is better)
Translates to: RGKRSLSSSLSSFHF*ISGGISFWMYSWRG
Trigger: CCCTCTCCAGGAATACATCCAGAAGCTGATGCCCCCACTGATCCAGAAGTGGAATGAGCTCAAGGACGAAGACAAGGACCTCTTCCCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000588491.1
CDS-3UTR CAA 90 bp AGTGTTGTAATCCTCCGAGTTAAGCAGGTTGCAGAGCTGGGGCAGCAGCTCGGGGGCTCATCTTCTGACTaGAGTCTGGTCAGGACGAAA +
Preference number: 5 (lower is better)
Translates to: SVVILRVKQVAELGQQLGGSSSD*SLVRTK
Trigger: TTTCGTCCTGACCAGACTCAAGTCAGAAGATGAGCC...CCCGAGCTGCTGCCCCAGCTCTGCAACCTGCTTAACTCGGAGGATTACAACACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000586775.5
ENST00000587654.5
CDS-3UTR CAA 90 bp CCGGAAGGTTCTCTAGAATTGCTGACCCAGTCTAGTAGGATCTCTGGGCTCACTATGTTGAGGGGCCTGTaGAGGGCGTCACTGTCCAGA +
Preference number: 5 (lower is better)
Translates to: PEGSLELLTQSSRISGLTMLRGL*RASLSR
Trigger: TCTGGACAGTGACGCCCTCAACAGGCCCCTCAACAT...AGTGAGCCCAGAGATCCTACTAGACTGGGTCAGCAATTCTAGAGAACCTTCCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR CAA 90 bp TTGAGGGCGTCACTGTCCAGAAGCTCTGATGAGTCTTCACAGATCTTCTGCAGGATGTTGAGGGGCCTGTaGAGGGCGTCACTGTCCAGA +
Preference number: 5 (lower is better)
Translates to: LRASLSRSSDESSQIFCRMLRGL*RASLSR
Trigger: TCTGGACAGTGACGCCCTCAACAGGCCCCTCAACAT...CCTGCAGAAGATCTGTGAAGACTCATCAGAGCTTCTGGACAGTGACGCCCTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586775.5
ENST00000587654.5
CDS-3UTR CAA 90 bp ACTATGATGAGCAGGAAGTCCCAGGGAGATGGAATAGGGAACAGGGGACACACCATGTATTCCGGCTGGTaGAGGTGGTGGCCTACAGAG +
Preference number: 5 (lower is better)
Translates to: TMMSRKSQGDGIGNRGHTMYSGW*RWWPTE
Trigger: CTCTGTAGGCCACCACCTCAACCAGCCGGAATACAT...GGTGTGTCCCCTGTTCCCTATTCCATCTCCCTGGGACTTCCTGCTCATCATAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR CAA 90 bp GCGTGCAGGGACACCCAGCTAATTTATGGAATGTGTACTGAGTGCCCCTTGGAAAGCAATGTCATGATGTaGCTGCGGGCCACCAGCTGC +
Preference number: 5 (lower is better)
Translates to: ACRDTQLIYGMCTECPLESNVMM*LRATSC
Trigger: GCAGCTGGTGGCCCGCAGCAACATCATGACATTGCT...TTCCAAGGGGCACTCAGTACACATTCCATAAATTAGCTGGGTGTCCCTGCACGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR CAA 90 bp AAGTTCTACACAAGTGGAATCTCACGCCACCTCGGCGCCAATCCCCAGCACAGCGTTATCTTCCCCAACTaGGTCTTTGAAGCCGTGGAG +
Preference number: 5 (lower is better)
Translates to: KFYTSGISRHLGANPQHSVIFPN*VFEAVE
Trigger: CTCCACGGCTTCAAAGACCAAGTTGGGGAAGATAAC...GCTGTGCTGGGGATTGGCGCCGAGGTGGCGTGAGATTCCACTTGTGTAGAACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356861.9
CDS-3UTR CAA 90 bp CCATGTTCCCAGACTATTCCGGAAGGTTCTCTAGAATTGCTGACCCAGTCTAGTGGCGACTGTGAGTCTTaGAGCAGCTGCAGGACCTGC +
Preference number: 5 (lower is better)
Translates to: PCSQTIPEGSLELLTQSSGDCES*SSCRTC
Trigger: GCAGGTCCTGCAGCTGCTCAAAGACTCACAGTCGCC...ACTAGACTGGGTCAGCAATTCTAGAGAACCTTCCGGAATAGTCTGGGAACATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR CAA 90 bp CGGACGGACGGACGGACGGGGAAGGCATCTGGATTTGAGTCCCACTCACTCCTCAGGAAACTGATTGAGTaGTTTGAGTTTATCCTGCAC +
Preference number: 5 (lower is better)
Translates to: RTDGRTGKASGFESHSLLRKLIE*FEFILH
Trigger: GTGCAGGATAAACTCAAACAACTCAATCAGTTTCCT...GAGGAGTGAGTGGGACTCAAATCCAGATGCCTTCCCCGTCCGTCCGTCCGTCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR CAA 90 bp CTAAGGGGGTCTGCAAGGCCCAGTTTTCTGGCCAACTGGGAAGTAACTACACCCTCCTTGTCTTCGTCCTaGAGCTCATTCCACTTCTGG +
Preference number: 5 (lower is better)
Translates to: LRGSARPSFLANWEVTTPSLSSS*SSFHFW
Trigger: CCAGAAGTGGAATGAGCTCAAGGACGAAGACAAGGA...GGGTGTAGTTACTTCCCAGTTGGCCAGAAAACTGGGCCTTGCAGACCCCCTTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR CAA 90 bp TCCAGTGCTACGATCATGAAGTCCTTGTCGGGAGCCTCATACTGCTCAGGGTGCTCCTTGTCTTCGTCCTaGAGCTCATTCCACTTCTGG +
Preference number: 5 (lower is better)
Translates to: SSATIMKSLSGASYCSGCSLSSS*SSFHFW
Trigger: CCAGAAGTGGAATGAGCTCAAGGACGAAGACAAGGA...GCACCCTGAGCAGTATGAGGCTCCCGACAAGGACTTCATGATCGTAGCACTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588491.1
ENST00000589572.5
CDS-3UTR CAA 90 bp GCGTGCAGGGACACCCAGCTAATTTATGGAATGTGTACTGAGTGCCCCTTGGAATCGGCGATACAGGGCTaGACATGGATGAAGCAGGCT +
Preference number: 5 (lower is better)
Translates to: ACRDTQLIYGMCTECPLESAIQG*TWMKQA
Trigger: AGCCTGCTTCATCCATGTCAAGCCCTGTATCGCCGA...TTCCAAGGGGCACTCAGTACACATTCCATAAATTAGCTGGGTGTCCCTGCACGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR CAA 90 bp ATCTCTGGGCTCACTGGGTACTATGATGAGCAGGAAGTCCCAGGGAGATGGAATGAGTCCTTCTCCTCGTaGTCCCTGATGTTCCTGAGG +
Preference number: 5 (lower is better)
Translates to: ISGLTGYYDEQEVPGRWNESFSS*SLMFLR
Trigger: CCTCAGGAACATCAGGGACAACGAGGAGAAGGACTC...ATTCCATCTCCCTGGGACTTCCTGCTCATCATAGTACCCAGTGAGCCCAGAGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS GCA 90 bp GGAGGCATCGCCAATGTTGTTGAGACACTCCTGTTTGATGAAGTCTaGCACAGGGGGTGGGAAGCTCTGATAGTGTGCCTTCACGTTGTT +
Preference number: 5 (lower is better)
Translates to: GGIANVVETLLFDEV*HRGWEALIVCLHVV
Trigger: AACAACGTGAAGGCACACTATCAGAGCTTCCCACCCCCTGTGGCAGACTTCATCAAACAGGAGTGTCTCAACAACATTGGCGATGCCTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000356861.9
ENST00000425528.6
ENST00000450764.6
ENST00000585886.5
ENST00000586775.5
ENST00000587654.5
ENST00000588216.5
ENST00000588484.1
ENST00000589956.5
ENST00000592287.5
CDS CCA 90 bp TGTTCCTGCCCTTCAAGCTCAGTGGATGCCAGATATCCCCCTCTGTaGCCTAGCCAAATTCTAAGGATTCCCCTTAATCAGGCCCAAAGC +
Preference number: 5 (lower is better)
Translates to: CSCPSSSVDARYPPL*PSQILRIPLNQAQS
Trigger: GCTTTGGGCCTGATTAAGGGGAATCCTTAGAATTTGGCTAGGCCACAGAGGGGGATATCTGGCATCCACTGAGCTTGAAGGGCAGGAACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000450764.6
CDS-3UTR CAA 90 bp TGCAGCGCACTCCCCAGTAATCCCTCCGACGACGACGCAGACAGAAACCTGGCAAGGAAACTGATTGAGTaGTTTGAGTTTATCCTGCAC +
Preference number: 5 (lower is better)
Translates to: CSALPSNPSDDDADRNLARKLIE*FEFILH
Trigger: GTGCAGGATAAACTCAAACAACTCAATCAGTTTCCT...TGCCAGGTTTCTGTCTGCGTCGTCGTCGGAGGGATTACTGGGGAGTGCGCTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356861.9
ENST00000450764.6
ENST00000592287.5
CDS-3UTR CAA 90 bp TTGAGGGCGTCACTGTCCAGAAGCTCTGATGAGTCTTCACAGATCTTCTGCAGGGCCTTCACGTTGTTCTaGAGGATGAGGCCACTGAGA +
Preference number: 5 (lower is better)
Translates to: LRASLSRSSDESSQIFCRAFTLF*RMRPLR
Trigger: TCTCAGTGGCCTCATCCTCAAGAACAACGTGAAGGC...CCTGCAGAAGATCTGTGAAGACTCATCAGAGCTTCTGGACAGTGACGCCCTCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586775.5
ENST00000587654.5
CDS-3UTR CAA 90 bp ATGCTCGGGGTAGGTGCCAGTAGCTCTGGCTACACCCAGCTCTCTTCAGGAAAAGCATCGCCAATGTTGTaGAGACACTCCTGTTTGATG +
Preference number: 5 (lower is better)
Translates to: MLGVGASSSGYTQLSSGKASPML*RHSCLM
Trigger: CATCAAACAGGAGTGTCTCAACAACATTGGCGATGC...TTTTCCTGAAGAGAGCTGGGTGTAGCCAGAGCTACTGGCACCTACCCCGAGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR CAA 90 bp TTGAGGGGCCTGTTGAGGGCGTCACTGTCCAGAAGCTCTGATGAGTCTTCACAGGCATCGCCAATGTTGTaGAGACACTCCTGTTTGATG +
Preference number: 5 (lower is better)
Translates to: LRGLLRASLSRSSDESSQASPML*RHSCLM
Trigger: CATCAAACAGGAGTGTCTCAACAACATTGGCGATGC...CTGTGAAGACTCATCAGAGCTTCTGGACAGTGACGCCCTCAACAGGCCCCTCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586775.5
ENST00000587654.5
CDS-3UTR CAA 90 bp CGTCACTGTCCAGAAGCTCTGATGAGTCTTCACAGATCTTCTGCAGGGCTCCAAATGAAGGTGTCAATATaGTCCATCAGCGCCTGGGCC +
Preference number: 5 (lower is better)
Translates to: RHCPEALMSLHRSSAGLQMKVSI*SISAWA
Trigger: GGCCCAGGCGCTGATGGACAATATTGACACCTTCAT...TTGGAGCCCTGCAGAAGATCTGTGAAGACTCATCAGAGCTTCTGGACAGTGACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586775.5
CDS-3UTR CAA 90 bp TACACCCAGCTCTCTTCAGGAAAAAGGTCCCAACCCAGTGTCTTCAAAAGCCACAACTCTGGGTTCAGGTaGGTGCCCAGAATGGGCATG +
Preference number: 5 (lower is better)
Translates to: YTQLSSGKRSQPSVFKSHNSGFR*VPRMGM
Trigger: CATGCCCATTCTGGGCACCAACCTGAACCCAGAGTT...GTGGCTTTTGAAGACACTGGGTTGGGACCTTTTTCCTGAAGAGAGCTGGGTGTA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR CAA 90 bp TTGACCATGTTCCCAGACTATTCCGGAAGGTTCTCTAGAATTGCTGACCCAGTCGCCCAGGTGGCGTTGTaGCAGACGGAGATGAACTCT +
Preference number: 5 (lower is better)
Translates to: LTMFPDYSGRFSRIADPVAQVAL*QTEMNS
Trigger: AGAGTTCATCTCCGTCTGCAACAACGCCACCTGGGC...GACTGGGTCAGCAATTCTAGAGAACCTTCCGGAATAGTCTGGGAACATGGTCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR CAA 90 bp ACTATGATGAGCAGGAAGTCCCAGGGAGATGGAATAGGGAACAGGGGACACACCTTTTCCAGCAGTGTCTaGGGTGTGTTGGGTCGGTTA +
Preference number: 5 (lower is better)
Translates to: TMMSRKSQGDGIGNRGHTFSSSV*GVLGRL
Trigger: TAACCGACCCAACACACCCAAGACACTGCTGGAAAA...GGTGTGTCCCCTGTTCCCTATTCCATCTCCCTGGGACTTCCTGCTCATCATAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR CAA 90 bp GGGTTCACTAATTCTACTGTCTCCATGCAGTCGGGGAAATGGTGGAGCGGCTGGTCCCCAACTTGGTCTTaGAAGCCGTGGAGAATCTTA +
Preference number: 5 (lower is better)
Translates to: GFTNSTVSMQSGKWWSGWSPTWS*KPWRIL
Trigger: TAAGATTCTCCACGGCTTCAAAGACCAAGTTGGGGA...CCAGCCGCTCCACCATTTCCCCGACTGCATGGAGACAGTAGAATTAGTGAACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR CAA 90 bp CTAAGGGGGTCTGCAAGGCCCAGTTTTCTGGCCAACTGGGAAGTAACTACACCCGAAGGTTCTCTAGAATaGCTGACCCAGTCTAGTAGG +
Preference number: 5 (lower is better)
Translates to: LRGSARPSFLANWEVTTPEGSLE*LTQSSR
Trigger: CCTACTAGACTGGGTCAGCAATTCTAGAGAACCTTC...GGGTGTAGTTACTTCCCAGTTGGCCAGAAAACTGGGCCTTGCAGACCCCCTTAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR CAA 90 bp TACACCCAGCTCTCTTCAGGAAAAAGGTCCCAACCCAGTGTCTTCAAAAGCCACGGAGCCCCTTCCACCTaGACCATGTTCCCAGACTAT +
Preference number: 5 (lower is better)
Translates to: YTQLSSGKRSQPSVFKSHGAPST*TMFPDY
Trigger: ATAGTCTGGGAACATGGTCAAGGTGGAAGGGGCTCC...GTGGCTTTTGAAGACACTGGGTTGGGACCTTTTTCCTGAAGAGAGCTGGGTGTA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR CAA 90 bp TGTCCAGAAGCTCTGATGAGTCTTCACAGATCTTCTGCAGGGCTCCAAAGGCTCGGCTCATCTTCTGACTaGAGTCTGGTCAGGACGAAA +
Preference number: 5 (lower is better)
Translates to: CPEALMSLHRSSAGLQRLGSSSD*SLVRTK
Trigger: TTTCGTCCTGACCAGACTCAAGTCAGAAGATGAGCC...GAGCCTTTGGAGCCCTGCAGAAGATCTGTGAAGACTCATCAGAGCTTCTGGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586775.5
ENST00000587654.5
CDS-3UTR CAA 90 bp ATGTTGAGGGGCCTGTTGAGGGCGTCACTGTCCAGAAGCTCTGATGAGTCTTCAGCATCGCCAATGTTGTaGAGACACTCCTGTTTGATG +
Preference number: 5 (lower is better)
Translates to: MLRGLLRASLSRSSDESSASPML*RHSCLM
Trigger: CATCAAACAGGAGTGTCTCAACAACATTGGCGATGC...TGAAGACTCATCAGAGCTTCTGGACAGTGACGCCCTCAACAGGCCCCTCAACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586775.5
ENST00000587654.5
CDS-3UTR CAA 90 bp CGTCACTGTCCAGAAGCTCTGATGAGTCTTCACAGATCTTCTGCAGGGCTCCAAGAGGCATCGCCAATGTaGTTGAGACACTCCTGTTTG +
Preference number: 5 (lower is better)
Translates to: RHCPEALMSLHRSSAGLQEASPM*LRHSCL
Trigger: CAAACAGGAGTGTCTCAACAACATTGGCGATGCCTC...TTGGAGCCCTGCAGAAGATCTGTGAAGACTCATCAGAGCTTCTGGACAGTGACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586775.5
ENST00000587654.5
CDS-3UTR CAA 90 bp GCGTGCAGGGACACCCAGCTAATTTATGGAATGTGTACTGAGTGCCCCTTGGAATCCTTGTCTTCGTCCTaGAGCTCATTCCACTTCTGG +
Preference number: 5 (lower is better)
Translates to: ACRDTQLIYGMCTECPLESLSSS*SSFHFW
Trigger: CCAGAAGTGGAATGAGCTCAAGGACGAAGACAAGGA...TTCCAAGGGGCACTCAGTACACATTCCATAAATTAGCTGGGTGTCCCTGCACGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR CAA 90 bp TGCATGTGGGGGATGAGCCTGTCAATCCGCACTTCCAGAAGCATCACCAGGGCAAGGAAACTGATTGAGTaGTTTGAGTTTATCCTGCAC +
Preference number: 5 (lower is better)
Translates to: CMWGMSLSIRTSRSITRARKLIE*FEFILH
Trigger: GTGCAGGATAAACTCAAACAACTCAATCAGTTTCCT...TGCCCTGGTGATGCTTCTGGAAGTGCGGATTGACAGGCTCATCCCCCACATGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000586775.5
CDS-3UTR CAA 90 bp CTCTCTTCAGGAAAAAGGTCCCAACCCAGTGTCTTCAAAAGCCACTGGAGCACAGGCTCATCTTCTGACTaGAGTCTGGTCAGGACGAAA +
Preference number: 5 (lower is better)
Translates to: LSSGKRSQPSVFKSHWSTGSSSD*SLVRTK
Trigger: TTTCGTCCTGACCAGACTCAAGTCAGAAGATGAGCC...TGTGCTCCAGTGGCTTTTGAAGACACTGGGTTGGGACCTTTTTCCTGAAGAGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS CCA 90 bp AATGTTGTTGAGACACTCCTGTTTGATGAAGTCTGCCACAGGGGGTaGGAAGCTCTGATAGTGTGCCTTCACGTTGTTCTTGAGGATGAG +
Preference number: 5 (lower is better)
Translates to: NVVETLLFDEVCHRG*EALIVCLHVVLEDE
Trigger: CTCATCCTCAAGAACAACGTGAAGGCACACTATCAGAGCTTCCCACCCCCTGTGGCAGACTTCATCAAACAGGAGTGTCTCAACAACATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000356861.9
ENST00000425528.6
ENST00000450764.6
ENST00000585886.5
ENST00000586775.5
ENST00000587654.5
ENST00000588216.5
ENST00000588484.1
ENST00000589956.5
ENST00000592287.5
CDS-3UTR CAA 90 bp CCATGTTCCCAGACTATTCCGGAAGGTTCTCTAGAATTGCTGACCCAGTCTAGTGAGGCATCGCCAATGTaGTTGAGACACTCCTGTTTG +
Preference number: 5 (lower is better)
Translates to: PCSQTIPEGSLELLTQSSEASPM*LRHSCL
Trigger: CAAACAGGAGTGTCTCAACAACATTGGCGATGCCTC...ACTAGACTGGGTCAGCAATTCTAGAGAACCTTCCGGAATAGTCTGGGAACATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR CAA 90 bp CTCTCTTCAGGAAAAAGGTCCCAACCCAGTGTCTTCAAAAGCCACTGGAGCACAGAAGGTTCTCTAGAATaGCTGACCCAGTCTAGTAGG +
Preference number: 5 (lower is better)
Translates to: LSSGKRSQPSVFKSHWSTEGSLE*LTQSSR
Trigger: CCTACTAGACTGGGTCAGCAATTCTAGAGAACCTTC...TGTGCTCCAGTGGCTTTTGAAGACACTGGGTTGGGACCTTTTTCCTGAAGAGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000450764.6
CDS-3UTR CAA 90 bp TTGAGGGCGTCACTGTCCAGAAGCTCTGATGAGTCTTCACAGATCTTCTGCAGGAGGAAACTGATTGAGTaGTTTGAGTTTATCCTGCAC +
Preference number: 5 (lower is better)
Translates to: LRASLSRSSDESSQIFCRRKLIE*FEFILH
Trigger: GTGCAGGATAAACTCAAACAACTCAATCAGTTTCCT...CCTGCAGAAGATCTGTGAAGACTCATCAGAGCTTCTGGACAGTGACGCCCTCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586775.5
ENST00000587654.5
CDS CCA 72 bp TCCGAGCCCGAAGGCTTCCACCTCCCTCGCAGCGGCTaGGCGAGGGCCCAGCCGCCTCCACATCCAGGGGCC +
Preference number: 6 (lower is better)
Translates to: SEPEGFHLPRSG*ARAQPPPHPGA
Trigger: GGCCCCTGGATGTGGAGGCGGCTGGGCCCTCGCCCAGCCGCTGCGAGGGAGGTGGAAGCCTTCGGGCTCGGA
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450764.6
CDS CCA 72 bp CCTGCTGCAGGCCCTGCTCGTCTGGCTGCCAGTCCATaGCGCAAGGCAAGCCGGCCCCGGGCAGCAGCGGCG +
Preference number: 6 (lower is better)
Translates to: PAAGPARLAASP*RKASRPRAAAA
Trigger: CGCCGCTGCTGCCCGGGGCCGGCTTGCCTTGCGCCATGGACTGGCAGCCAGACGAGCAGGGCCTGCAGCAGG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000585886.5
ENST00000587654.5
ENST00000589956.5
ENST00000592287.5
CDS GCA 72 bp GGGAGCAGGGCGAGGGCGGGGCCGGGTCTGTCTGTCTaGCTGTCGAGGTCACGGCCACGTCCCGGCTGGTTG +
Preference number: 6 (lower is better)
Translates to: GSRARAGPGLSV*LSRSRPRPGWL
Trigger: CAACCAGCCGGGACGTGGCCGTGACCTCGACAGGCAGACAGACAGACCCGGCCCCGCCCTCGCCCTGCTCCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589572.5
CDS TCA 72 bp TCTCTGGGGCTCCGTGTGAGACCCAGGTGGAGCCCCTaGGGCCGCGGTGGCCGCATGACGACGGGAACGCCC +
Preference number: 6 (lower is better)
Translates to: SLGLRVRPRWSP*GRGGRMTTGTP
Trigger: GGGCGTTCCCGTCGTCATGCGGCCACCGCGGCCTCAGGGGCTCCACCTGGGTCTCACACGGAGCCCCAGAGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450764.6
CDS CCA 72 bp CCTCATGGGACCCAGCGAAGAGCCCTCGTCCCAGGGTaGCCCATGCCGCTGACCCCGGCTCCGAGCCCGAAG +
Preference number: 6 (lower is better)
Translates to: PHGTQRRALVPG*PMPLTPAPSPK
Trigger: CTTCGGGCTCGGAGCCGGGGTCAGCGGCATGGGCCACCCTGGGACGAGGGCTCTTCGCTGGGTCCCATGAGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450764.6
CDS CCA 72 bp CCTGCTGCAGGCCCTGCTCGTCTGGCTGCCAGTCCATaGCGCAAGGCAAGCTGCGGAGGTAGGGGCCGGGGT +
Preference number: 6 (lower is better)
Translates to: PAAGPARLAASP*RKASCGGRGRG
Trigger: ACCCCGGCCCCTACCTCCGCAGCTTGCCTTGCGCCATGGACTGGCAGCCAGACGAGCAGGGCCTGCAGCAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450764.6
CDS CAA 72 bp TCCAGCCCGACCCCAGCAGTCCCACTGGCCCTCTTCTaGAGGAGCCCCGACATGGCCTGGCTCCGAGGCCCC +
Preference number: 6 (lower is better)
Translates to: SSPTPAVPLALF*RSPDMAWLRGP
Trigger: GGGGCCTCGGAGCCAGGCCATGTCGGGGCTCCTCAAGAAGAGGGCCAGTGGGACTGCTGGGGTCGGGCTGGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000586775.5
CDS CCA 72 bp CCTGCTGCAGGCCCTGCTCGTCTGGCTGCCAGTCCATaGCGCAAGGCAAGCCGATCCTCGCGACGTCCCCCA +
Preference number: 6 (lower is better)
Translates to: PAAGPARLAASP*RKASRSSRRPP
Trigger: TGGGGGACGTCGCGAGGATCGGCTTGCCTTGCGCCATGGACTGGCAGCCAGACGAGCAGGGCCTGCAGCAGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356861.9
ENST00000586775.5
CDS CCA 72 bp CTGTCGAGGTCACGGCCACGTCCCGGCTGGTTGAGGTaGTGGCCTACAGAGTCGGCCAGGGTGCCAATGGCG +
Preference number: 6 (lower is better)
Translates to: LSRSRPRPGWLR*WPTESARVPMA
Trigger: CGCCATTGGCACCCTGGCCGACTCTGTAGGCCACCACCTCAACCAGCCGGGACGTGGCCGTGACCTCGACAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589572.5
CDS CAA 72 bp GTCTGCCTGTCGAGGTCACGGCCACGTCCCGGCTGGTaGAGGTGGTGGCCTACAGAGTCGGCCAGGGTGCCA +
Preference number: 6 (lower is better)
Translates to: VCLSRSRPRPGW*RWWPTESARVP
Trigger: TGGCACCCTGGCCGACTCTGTAGGCCACCACCTCAACCAGCCGGGACGTGGCCGTGACCTCGACAGGCAGAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589572.5
CDS TCA 72 bp CCTCCTGGGGGCACACGTAGCCCAAGCGGCCGATGGTaGTGGCTGGAATGGCAGAGGGACTCGTCAGGCGAC +
Preference number: 6 (lower is better)
Translates to: PPGGTRSPSGRW*WLEWQRDSSGD
Trigger: GTCGCCTGACGAGTCCCTCTGCCATTCCAGCCATCACCATCGGCCGCTTGGGCTACGTGTGCCCCCAGGAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000425528.6
ENST00000592287.5
CDS TCA 72 bp TCTGCCTGTCGAGGTCACGGCCACGTCCCGGCTGGTTaGGGTGGTGGCCTACAGAGTCGGCCAGGGTGCCAA +
Preference number: 6 (lower is better)
Translates to: SACRGHGHVPAG*GGGLQSRPGCQ
Trigger: TTGGCACCCTGGCCGACTCTGTAGGCCACCACCTCAACCAGCCGGGACGTGGCCGTGACCTCGACAGGCAGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589572.5
CDS CCA 72 bp TCCGCGTCCTCGGAGCCATCAGGCCGCTCAGCCTCGTaGGGCAGTGTGACCGTGCGTGACTTGTGGAAGCGT +
Preference number: 6 (lower is better)
Translates to: SASSEPSGRSAS*GSVTVRDLWKR
Trigger: ACGCTTCCACAAGTCACGCACGGTCACACTGCCCCACGAGGCTGAGCGGCCTGATGGCTCCGAGGACGCGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000356861.9
ENST00000425528.6
ENST00000450764.6
ENST00000585886.5
ENST00000588151.5
ENST00000588216.5
ENST00000589956.5
ENST00000592287.5
CDS CCA 72 bp TCGAGGTCACGGCCACGTCCCGGCTGGTTGAGGTGGTaGCCTACAGAGTCGGCCAGGGTGCCAATGGCGTCA +
Preference number: 6 (lower is better)
Translates to: SRSRPRPGWLRW*PTESARVPMAS
Trigger: TGACGCCATTGGCACCCTGGCCGACTCTGTAGGCCACCACCTCAACCAGCCGGGACGTGGCCGTGACCTCGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589572.5
CDS CCA 72 bp TCTGTCTGCCTGTCGAGGTCACGGCCACGTCCCGGCTaGTTGAGGTGGTGGCCTACAGAGTCGGCCAGGGTG +
Preference number: 6 (lower is better)
Translates to: SVCLSRSRPRPG*LRWWPTESARV
Trigger: CACCCTGGCCGACTCTGTAGGCCACCACCTCAACCAGCCGGGACGTGGCCGTGACCTCGACAGGCAGACAGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589572.5
CDS CAA 90 bp GGTCTGTCTGTCTGCCTGTCGAGGTCACGGCCACGTCCCGGCTGGTaGAGGTGGTGGCCTACAGAGTCGGCCAGGGTGCCAATGGCGTCA +
Preference number: 6 (lower is better)
Translates to: GLSVCLSRSRPRPGW*RWWPTESARVPMAS
Trigger: TGACGCCATTGGCACCCTGGCCGACTCTGTAGGCCACCACCTCAACCAGCCGGGACGTGGCCGTGACCTCGACAGGCAGACAGACAGACC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589572.5
CDS GCA 72 bp TCAGGTGCGGGATCAGCTCAGGCAGGTAGGGCACCATaGCCTGCATGCAGCCCTCAGCAATGGCGCCCAGCA +
Preference number: 6 (lower is better)
Translates to: SGAGSAQAGRAP*PACSPQQWRPA
Trigger: TGCTGGGCGCCATTGCTGAGGGCTGCATGCAGGGCATGGTGCCCTACCTGCCTGAGCTGATCCCGCACCTGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356861.9
ENST00000425528.6
ENST00000450764.6
ENST00000585886.5
ENST00000588216.5
ENST00000592287.5
CDS CAA 90 bp CCATCAGGCCGCTCAGCCTCGTGGGGCAGTGTGACCGTGCGTGACTaGTGGAAGCGTGGCTTGATGTCCTGCTCACTGTCGGGGACAGCC +
Preference number: 6 (lower is better)
Translates to: PSGRSASWGSVTVRD*WKRGLMSCSLSGTA
Trigger: GGCTGTCCCCGACAGTGAGCAGGACATCAAGCCACGCTTCCACAAGTCACGCACGGTCACACTGCCCCACGAGGCTGAGCGGCCTGATGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000356861.9
ENST00000425528.6
ENST00000450764.6
ENST00000585886.5
ENST00000588151.5
ENST00000588216.5
ENST00000592287.5
CDS GCA 72 bp ATGTTCCTGAGGGACGTGCACCAAGGCCGGATGAACTaGTGCAGCATGGGTGCCACCTCCTGGGGGCACACG +
Preference number: 6 (lower is better)
Translates to: MFLRDVHQGRMN*CSMGATSWGHT
Trigger: CGTGTGCCCCCAGGAGGTGGCACCCATGCTGCAGCAGTTCATCCGGCCTTGGTGCACGTCCCTCAGGAACAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000356861.9
ENST00000425528.6
ENST00000450764.6
ENST00000587155.1
ENST00000588216.5
ENST00000589149.5
ENST00000592287.5
CDS CCA 72 bp GTGGCAGACTGTGACTCAGGTACCGGCTGGTTGAGGTaGTGGCCTACAGAGTCGGCCAGGGTGCCAATGGCG +
Preference number: 6 (lower is better)
Translates to: VADCDSGTGWLR*WPTESARVPMA
Trigger: CGCCATTGGCACCCTGGCCGACTCTGTAGGCCACCACCTCAACCAGCCGGTACCTGAGTCACAGTCTGCCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588491.1
CDS CCA 72 bp GTATTCCTGGAGAGGGAGCACGAAATGGGCGCTCCCTaGGTCGGGGTGGCAGACTGTGACTCAGGTACCGGC +
Preference number: 6 (lower is better)
Translates to: VFLEREHEMGAP*VGVADCDSGTG
Trigger: GCCGGTACCTGAGTCACAGTCTGCCACCCCGACCCAGGGAGCGCCCATTTCGTGCTCCCTCTCCAGGAATAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588491.1
CDS CAA 72 bp TCAGCAATGGCGCCCAGCACCAGGATGCCCGACTCCTaGACCACCCACTCGGGGTGGAAGAGGAGGCCTTTG +
Preference number: 6 (lower is better)
Translates to: SAMAPSTRMPDS*TTHSGWKRRPL
Trigger: CAAAGGCCTCCTCTTCCACCCCGAGTGGGTGGTCAAGGAGTCGGGCATCCTGGTGCTGGGCGCCATTGCTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356861.9
ENST00000425528.6
ENST00000450764.6
ENST00000585886.5
ENST00000588216.5
ENST00000592287.5
CDS CAA 90 bp ATGCAGCCCTCAGCAATGGCGCCCAGCACCAGGATGCCCGACTCCTaGACCACCCACTCGGGGTGGAAGAGGAGGCCTTTGAGTAGTGGG +
Preference number: 6 (lower is better)
Translates to: MQPSAMAPSTRMPDS*TTHSGWKRRPLSSG
Trigger: CCCACTACTCAAAGGCCTCCTCTTCCACCCCGAGTGGGTGGTCAAGGAGTCGGGCATCCTGGTGCTGGGCGCCATTGCTGAGGGCTGCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356861.9
ENST00000425528.6
ENST00000450764.6
ENST00000585886.5
ENST00000588216.5
ENST00000592287.5
CDS CAA 90 bp CCATCAGGCCGCTCAGCCTCGTGGGGCAGTGTGACCGTGCGTGACTaGTGGAAGCGTGGCTTGATGTCCTGCTCACCTTGGAAGCGATGG +
Preference number: 6 (lower is better)
Translates to: PSGRSASWGSVTVRD*WKRGLMSCSPWKRW
Trigger: CCATCGCTTCCAAGGTGAGCAGGACATCAAGCCACGCTTCCACAAGTCACGCACGGTCACACTGCCCCACGAGGCTGAGCGGCCTGATGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589956.5
CDS CAA 90 bp TGCCCACCCCCAGCCCAGCGGCCCACCTCGATGAAGGTGTCAATATaGTCCATCAGCGCCTGGGCCCGGTCCATGATGAACTGGTTCACG +
Preference number: 6 (lower is better)
Translates to: CPPPAQRPTSMKVSI*SISAWARSMMNWFT
Trigger: CGTGAACCAGTTCATCATGGACCGGGCCCAGGCGCTGATGGACAATATTGACACCTTCATCGAGGTGGGCCGCTGGGCTGGGGGTGGGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000588484.1
CDS TCA 72 bp CTGCACGATGCGCTGAGTGGCTGTGTTGGGCGACTGTaGGTCTTTGAGCAGCTGCAGGACCTGCTGCAGGCC +
Preference number: 6 (lower is better)
Translates to: LHDALSGCVGRL*VFEQLQDLLQA
Trigger: GGCCTGCAGCAGGTCCTGCAGCTGCTCAAAGACTCACAGTCGCCCAACACAGCCACTCAGCGCATCGTGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000356861.9
ENST00000425528.6
ENST00000450764.6
ENST00000585886.5
ENST00000586775.5
ENST00000587654.5
ENST00000588216.5
ENST00000589337.5
ENST00000589956.5
ENST00000590781.1
ENST00000592287.5
CDS CCA 72 bp TCAGCCTCGTGGGGCAGTGTGACCGTGCGTGACTTGTaGAAGCGTGGCTTGATGTCCTGCTCACTGTCGGGG +
Preference number: 6 (lower is better)
Translates to: SASWGSVTVRDL*KRGLMSCSLSG
Trigger: CCCCGACAGTGAGCAGGACATCAAGCCACGCTTCCACAAGTCACGCACGGTCACACTGCCCCACGAGGCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000356861.9
ENST00000425528.6
ENST00000450764.6
ENST00000585886.5
ENST00000588151.5
ENST00000588216.5
ENST00000592287.5
CDS CCA 72 bp GCAGACTGTGACTCAGGTACCGGCTGGTTGAGGTGGTaGCCTACAGAGTCGGCCAGGGTGCCAATGGCGTCA +
Preference number: 6 (lower is better)
Translates to: ADCDSGTGWLRW*PTESARVPMAS
Trigger: TGACGCCATTGGCACCCTGGCCGACTCTGTAGGCCACCACCTCAACCAGCCGGTACCTGAGTCACAGTCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588491.1
CDS CAA 72 bp CGCTCAGCCTCGTGGGGCAGTGTGACCGTGCGTGACTaGTGGAAGCGTGGCTTGATGTCCTGCTCACTGTCG +
Preference number: 6 (lower is better)
Translates to: RSASWGSVTVRD*WKRGLMSCSLS
Trigger: CGACAGTGAGCAGGACATCAAGCCACGCTTCCACAAGTCACGCACGGTCACACTGCCCCACGAGGCTGAGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000356861.9
ENST00000425528.6
ENST00000450764.6
ENST00000585886.5
ENST00000588151.5
ENST00000588216.5
ENST00000592287.5
CDS CAA 72 bp CGCTCAGCCTCGTGGGGCAGTGTGACCGTGCGTGACTaGTGGAAGCGTGGCTTGATGTCCTGCTCACCTTGG +
Preference number: 6 (lower is better)
Translates to: RSASWGSVTVRD*WKRGLMSCSPW
Trigger: CCAAGGTGAGCAGGACATCAAGCCACGCTTCCACAAGTCACGCACGGTCACACTGCCCCACGAGGCTGAGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589956.5
CDS CCA 72 bp ACCAGGATGCCCGACTCCTTGACCACCCACTCGGGGTaGAAGAGGAGGCCTTTGAGTAGTGGGAGTAGGTGG +
Preference number: 6 (lower is better)
Translates to: TRMPDSLTTHSG*KRRPLSSGSRW
Trigger: CCACCTACTCCCACTACTCAAAGGCCTCCTCTTCCACCCCGAGTGGGTGGTCAAGGAGTCGGGCATCCTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356861.9
ENST00000425528.6
ENST00000450764.6
ENST00000585886.5
ENST00000588216.5
ENST00000592287.5
CDS CCA 72 bp GGCATCAGCTTCTGGATGTATTCCGGCTGGTTGAGGTaGTGGCCTACAGAGTCGGCCAGGGTGCCAATGGCG +
Preference number: 6 (lower is better)
Translates to: GISFWMYSGWLR*WPTESARVPMA
Trigger: CGCCATTGGCACCCTGGCCGACTCTGTAGGCCACCACCTCAACCAGCCGGAATACATCCAGAAGCTGATGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356861.9
ENST00000425528.6
ENST00000450764.6
ENST00000585886.5
ENST00000588216.5
ENST00000592287.5
CDS CCA 72 bp CATCTAGACACAGATGCCGACAGGGGCACGGGTAAGTaGAGCAGGCCCGAGGCAGGCCAATGCAGAAGCACA +
Preference number: 6 (lower is better)
Translates to: HLDTDADRGTGK*SRPEAGQCRST
Trigger: TGTGCTTCTGCATTGGCCTGCCTCGGGCCTGCTCCACTTACCCGTGCCCCTGTCGGCATCTGTGTCTAGATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587068.1
CDS CAA 72 bp GGCAGTGTGACCGTGCGTGACTTGTGGAAGCGTGGCTaGATGTCCTGCTCACTGTCGGGGACAGCCTCATCC +
Preference number: 6 (lower is better)
Translates to: GSVTVRDLWKRG*MSCSLSGTASS
Trigger: GGATGAGGCTGTCCCCGACAGTGAGCAGGACATCAAGCCACGCTTCCACAAGTCACGCACGGTCACACTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000356861.9
ENST00000425528.6
ENST00000450764.6
ENST00000585886.5
ENST00000588151.5
ENST00000588216.5
ENST00000592287.5
CDS CAA 72 bp CCAGCCCAGCGGCCCACCTCGATGAAGGTGTCAATATaGTCCATCAGCGCCTGGGCCCGGTCCATGATGAAC +
Preference number: 6 (lower is better)
Translates to: PAQRPTSMKVSI*SISAWARSMMN
Trigger: GTTCATCATGGACCGGGCCCAGGCGCTGATGGACAATATTGACACCTTCATCGAGGTGGGCCGCTGGGCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588484.1
CDS CAA 90 bp TTGCAGAGCTGGGGCAGCAGCTCGGGCCACATCTGCAGCTCACCCTaGGAAGCGATGGTGGTGATGAGAATGCCAATGGTGGCTCGGATG +
Preference number: 6 (lower is better)
Translates to: LQSWGSSSGHICSSP*EAMVVMRMPMVARM
Trigger: CATCCGAGCCACCATTGGCATTCTCATCACCACCATCGCTTCCAAGGGTGAGCTGCAGATGTGGCCCGAGCTGCTGCCCCAGCTCTGCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000356861.9
ENST00000425528.6
ENST00000450764.6
ENST00000585886.5
ENST00000588216.5
ENST00000588484.1
ENST00000592287.5
CDS GCA 72 bp ACCGTGCGTGACTTGTGGAAGCGTGGCTTGATGTCCTaGTCACTGTCGGGGACAGCCTCATCCTCCTCCACA +
Preference number: 6 (lower is better)
Translates to: TVRDLWKRGLMS*SLSGTASSSST
Trigger: TGTGGAGGAGGATGAGGCTGTCCCCGACAGTGAGCAGGACATCAAGCCACGCTTCCACAAGTCACGCACGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000356861.9
ENST00000425528.6
ENST00000450764.6
ENST00000585886.5
ENST00000588151.5
ENST00000588216.5
ENST00000592287.5
CDS GCA 72 bp AGCTGGAGACCCTGTAGCGTCTTGGTTTCCCCTCCCTaGCCTGCCGATAACAAAGTGGGAGACCTCCTGCCA +
Preference number: 6 (lower is better)
Translates to: SWRPCSVLVSPP*PADNKVGDLLP
Trigger: TGGCAGGAGGTCTCCCACTTTGTTATCGGCAGGGCAGGGAGGGGAAACCAAGACGCTACAGGGTCTCCAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590781.1
CDS CCA 72 bp AGCTTCTGGATGTATTCCTGGAGAGGGAGCACGAAATaGGCGCTCCCTGGGTCGGGGTGGCAGACTGTGACT +
Preference number: 6 (lower is better)
Translates to: SFWMYSWRGSTK*ALPGSGWQTVT
Trigger: AGTCACAGTCTGCCACCCCGACCCAGGGAGCGCCCATTTCGTGCTCCCTCTCCAGGAATACATCCAGAAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588491.1
CDS CCA 72 bp TCAGCCTCGTGGGGCAGTGTGACCGTGCGTGACTTGTaGAAGCGTGGCTTGATGTCCTGCTCACCTTGGAAG +
Preference number: 6 (lower is better)
Translates to: SASWGSVTVRDL*KRGLMSCSPWK
Trigger: CTTCCAAGGTGAGCAGGACATCAAGCCACGCTTCCACAAGTCACGCACGGTCACACTGCCCCACGAGGCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589956.5
CDS CAA 72 bp TGGGGCAGCAGCTCGGGCCACATCTGCAGCTCACCCTaGGAAGCGATGGTGGTGATGAGAATGCCAATGGTG +
Preference number: 6 (lower is better)
Translates to: WGSSSGHICSSP*EAMVVMRMPMV
Trigger: CACCATTGGCATTCTCATCACCACCATCGCTTCCAAGGGTGAGCTGCAGATGTGGCCCGAGCTGCTGCCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000356861.9
ENST00000425528.6
ENST00000450764.6
ENST00000585886.5
ENST00000588216.5
ENST00000588484.1
ENST00000592287.5
CDS CAA 72 bp ATGCAGATGCCGCGGAAGGCTGAGTCCTTCTCCTCGTaGTCCCTGATGTTCCTGAGGGACGTGCACCAAGGC +
Preference number: 6 (lower is better)
Translates to: MQMPRKAESFSS*SLMFLRDVHQG
Trigger: GCCTTGGTGCACGTCCCTCAGGAACATCAGGGACAACGAGGAGAAGGACTCAGCCTTCCGCGGCATCTGCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000356861.9
ENST00000425528.6
ENST00000450764.6
ENST00000587155.1
ENST00000588216.5
ENST00000589149.5
ENST00000592287.5
CDS CAA 90 bp CCGATCATCATGCAGATGCCGCGGAAGGCTGAGTCCTTCTCCTCGTaGTCCCTGATGTTCCTGAGGGACGTGCACCAAGGCCGGATGAAC +
Preference number: 6 (lower is better)
Translates to: PIIMQMPRKAESFSS*SLMFLRDVHQGRMN
Trigger: GTTCATCCGGCCTTGGTGCACGTCCCTCAGGAACATCAGGGACAACGAGGAGAAGGACTCAGCCTTCCGCGGCATCTGCATGATGATCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000356861.9
ENST00000425528.6
ENST00000450764.6
ENST00000587155.1
ENST00000588216.5
ENST00000589149.5
ENST00000592287.5
CDS CAA 90 bp GCTCACCCAATGGTGGCTCGGATGAGCGAGGAGGCATCGCCAATGTaGTTGAGACACTCCTGTTTGATGAAGTCTGCCACAGGGGGTGGG +
Preference number: 6 (lower is better)
Translates to: AHPMVARMSEEASPM*LRHSCLMKSATGGG
Trigger: CCCACCCCCTGTGGCAGACTTCATCAAACAGGAGTGTCTCAACAACATTGGCGATGCCTCCTCGCTCATCCGAGCCACCATTGGGTGAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000586775.5
ENST00000587654.5
CDS TCA 72 bp TCCCAAAGGCAAAGACAAGGGTGTCCAGGATGTAGCTaGGGTAGGGCACCAGCTCCGTGCAGGCCTCTTCCT +
Preference number: 6 (lower is better)
Translates to: SQRQRQGCPGCS*GRAPAPCRPLP
Trigger: AGGAAGAGGCCTGCACGGAGCTGGTGCCCTACCTCAGCTACATCCTGGACACCCTTGTCTTTGCCTTTGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000356861.9
ENST00000425528.6
ENST00000450764.6
ENST00000585886.5
ENST00000588216.5
ENST00000588491.1
ENST00000592287.5
CDS GCA 72 bp AGAGTCCCCTTCCCCCGACACTCTGCCCTTAACTTCTaGCAGATCCCAGAGGCCTCCTGCCCTAGTCCAATT +
Preference number: 6 (lower is better)
Translates to: RVPFPRHSALNF*QIPEASCPSPI
Trigger: AATTGGACTAGGGCAGGAGGCCTCTGGGATCTGGCAGAAGTTAAGGGCAGAGTGTCGGGGGAAGGGGACTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000450764.6
CDS CCA 72 bp ATCAGCTTCTGGATGTATTCCGGCTGGTTGAGGTGGTaGCCTACAGAGTCGGCCAGGGTGCCAATGGCGTCA +
Preference number: 6 (lower is better)
Translates to: ISFWMYSGWLRW*PTESARVPMAS
Trigger: TGACGCCATTGGCACCCTGGCCGACTCTGTAGGCCACCACCTCAACCAGCCGGAATACATCCAGAAGCTGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356861.9
ENST00000425528.6
ENST00000450764.6
ENST00000585886.5
ENST00000588216.5
ENST00000592287.5
CDS CAA 72 bp GAAAGCCGCCAGCCTCTCCTTGAGCAGCGGCGGGAATaGCTCAGAGAACTGCTGCCAGTTATCTTCCCCAAC +
Preference number: 6 (lower is better)
Translates to: ESRQPLLEQRRE*LRELLPVIFPN
Trigger: GTTGGGGAAGATAACTGGCAGCAGTTCTCTGAGCAATTCCCGCCGCTGCTCAAGGAGAGGCTGGCGGCTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356861.9
ENST00000425528.6
ENST00000450764.6
ENST00000588216.5
ENST00000589149.5
ENST00000592287.5
CDS CAA 90 bp GCCCCCATCTGCATGCAGATTTCACCAATGGCCCAGGTGGCGTTGTaGCAGACGGAGATGAACTCTGGGTTCAGGTTGGTGCCCAGAATG +
Preference number: 6 (lower is better)
Translates to: APICMQISPMAQVAL*QTEMNSGFRLVPRM
Trigger: CATTCTGGGCACCAACCTGAACCCAGAGTTCATCTCCGTCTGCAACAACGCCACCTGGGCCATTGGTGAAATCTGCATGCAGATGGGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000356861.9
ENST00000425528.6
ENST00000450764.6
ENST00000585886.5
ENST00000588216.5
ENST00000592287.5
CDS CAA 90 bp TCTGCCCCCATCTGCATGCAGATTTCACCAATGGCCCAGGTGGCGTaGTTGCAGACGGAGATGAACTCTGGGTTCAGGTTGGTGCCCAGA +
Preference number: 6 (lower is better)
Translates to: SAPICMQISPMAQVA*LQTEMNSGFRLVPR
Trigger: TCTGGGCACCAACCTGAACCCAGAGTTCATCTCCGTCTGCAACAACGCCACCTGGGCCATTGGTGAAATCTGCATGCAGATGGGGGCAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000356861.9
ENST00000425528.6
ENST00000450764.6
ENST00000585886.5
ENST00000588216.5
ENST00000592287.5
CDS CAA 90 bp CACCCAATGGTGGCTCGGATGAGCGAGGAGGCATCGCCAATGTTGTaGAGACACTCCTGTTTGATGAAGTCTGCCACAGGGGGTGGGAAG +
Preference number: 6 (lower is better)
Translates to: HPMVARMSEEASPML*RHSCLMKSATGGGK
Trigger: CTTCCCACCCCCTGTGGCAGACTTCATCAAACAGGAGTGTCTCAACAACATTGGCGATGCCTCCTCGCTCATCCGAGCCACCATTGGGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000586775.5
ENST00000587654.5
CDS CAA 90 bp CCTAACTCCACTCGGAGAATCGCGGAAGACACCCTAAAGGAGCAGTaGGGATTCCGAGGTAGCCAGTTCCGCTGGACTGAAACCTGGGCT +
Preference number: 6 (lower is better)
Translates to: PNSTRRIAEDTLKEQ*GFRGSQFRWTETWA
Trigger: AGCCCAGGTTTCAGTCCAGCGGAACTGGCTACCTCGGAATCCCAACTGCTCCTTTAGGGTGTCTTCCGCGATTCTCCGAGTGGAGTTAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588216.5
CDS CCA 72 bp TCTTGGTTTCCCCTCCCTGCCCTGCCGATAACAAAGTaGGAGACCTCCTGCCACTTGAAGCCTCAGTTTCCC +
Preference number: 6 (lower is better)
Translates to: SWFPLPALPITK*ETSCHLKPQFP
Trigger: GGGAAACTGAGGCTTCAAGTGGCAGGAGGTCTCCCACTTTGTTATCGGCAGGGCAGGGAGGGGAAACCAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590781.1
CDS CCA 72 bp GACAAGGCGAGTGTCGTACCGATACAGGGCTTGACATaGATGAAGCAGGCTTTGGTGAGGTCTCCCAGGAGG +
Preference number: 6 (lower is better)
Translates to: DKASVVPIQGLT*MKQALVRSPRR
Trigger: CCTCCTGGGAGACCTCACCAAAGCCTGCTTCATCCATGTCAAGCCCTGTATCGGTACGACACTCGCCTTGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587068.1
CDS CAA 90 bp ATGCCAATGGTGGCTCGGATGAGCGAGGAGGCATCGCCAATGTTGTaGAGACACTCCTGTTTGATGAAGTCTGCCACAGGGGGTGGGAAG +
Preference number: 6 (lower is better)
Translates to: MPMVARMSEEASPML*RHSCLMKSATGGGK
Trigger: CTTCCCACCCCCTGTGGCAGACTTCATCAAACAGGAGTGTCTCAACAACATTGGCGATGCCTCCTCGCTCATCCGAGCCACCATTGGCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000356861.9
ENST00000425528.6
ENST00000450764.6
ENST00000585886.5
ENST00000588216.5
ENST00000588484.1
ENST00000589956.5
ENST00000592287.5
CDS CAA 90 bp AGAATGCCAATGGTGGCTCGGATGAGCGAGGAGGCATCGCCAATGTaGTTGAGACACTCCTGTTTGATGAAGTCTGCCACAGGGGGTGGG +
Preference number: 6 (lower is better)
Translates to: RMPMVARMSEEASPM*LRHSCLMKSATGGG
Trigger: CCCACCCCCTGTGGCAGACTTCATCAAACAGGAGTGTCTCAACAACATTGGCGATGCCTCCTCGCTCATCCGAGCCACCATTGGCATTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000356861.9
ENST00000425528.6
ENST00000450764.6
ENST00000585886.5
ENST00000588216.5
ENST00000588484.1
ENST00000589956.5
ENST00000592287.5
CDS CAA 90 bp GACCCCATAGAAAGCCGCCAGCCTCTCCTTGAGCAGCGGCGGGAATaGCTCAGAGAACTGCTGCCAGTTATCTTCCCCAACTTGGTCTTT +
Preference number: 6 (lower is better)
Translates to: DPIESRQPLLEQRRE*LRELLPVIFPNLVF
Trigger: AAAGACCAAGTTGGGGAAGATAACTGGCAGCAGTTCTCTGAGCAATTCCCGCCGCTGCTCAAGGAGAGGCTGGCGGCTTTCTATGGGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356861.9
ENST00000425528.6
ENST00000450764.6
ENST00000588216.5
ENST00000589149.5
ENST00000592287.5
CDS TCA 72 bp GTTGACACCGATCATCATGCAGATGCCGCGGAAGGCTaGGTCCTTCTCCTCGTTGTCCCTGATGTTCCTGAG +
Preference number: 6 (lower is better)
Translates to: VDTDHHADAAEG*VLLLVVPDVPE
Trigger: CTCAGGAACATCAGGGACAACGAGGAGAAGGACTCAGCCTTCCGCGGCATCTGCATGATGATCGGTGTCAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000356861.9
ENST00000425528.6
ENST00000450764.6
ENST00000587155.1
ENST00000588216.5
ENST00000589149.5
ENST00000592287.5
CDS GCA 72 bp GAAGTCTGCCACAGGGGGTGGGAAGCTCTGATAGTGTaGCTTCACGTTGTTCTTGAGGATGAGGCCACTGAG +
Preference number: 6 (lower is better)
Translates to: EVCHRGWEALIV*LHVVLEDEATE
Trigger: CTCAGTGGCCTCATCCTCAAGAACAACGTGAAGGCACACTATCAGAGCTTCCCACCCCCTGTGGCAGACTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000356861.9
ENST00000425528.6
ENST00000450764.6
ENST00000585886.5
ENST00000586775.5
ENST00000587654.5
ENST00000588216.5
ENST00000588484.1
ENST00000589956.5
ENST00000592287.5
CDS CCA 72 bp AGAATGGGCATGAACTCGGCGATACAGGGCTTGACATaGATGAAGCAGGCTTTGGTGAGGTCTCCCAGGAGG +
Preference number: 6 (lower is better)
Translates to: RMGMNSAIQGLT*MKQALVRSPRR
Trigger: CCTCCTGGGAGACCTCACCAAAGCCTGCTTCATCCATGTCAAGCCCTGTATCGCCGAGTTCATGCCCATTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356861.9
ENST00000425528.6
ENST00000450764.6
ENST00000585886.5
ENST00000588216.5
ENST00000592287.5
CDS CAA 72 bp GTGGCTCGGATGAGCGAGGAGGCATCGCCAATGTTGTaGAGACACTCCTGTTTGATGAAGTCTGCCACAGGG +
Preference number: 6 (lower is better)
Translates to: VARMSEEASPML*RHSCLMKSATG
Trigger: CCCTGTGGCAGACTTCATCAAACAGGAGTGTCTCAACAACATTGGCGATGCCTCCTCGCTCATCCGAGCCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000356861.9
ENST00000425528.6
ENST00000450764.6
ENST00000585886.5
ENST00000586775.5
ENST00000587654.5
ENST00000588216.5
ENST00000588484.1
ENST00000589956.5
ENST00000592287.5
CDS CAA 72 bp ACTCGGAGAATCGCGGAAGACACCCTAAAGGAGCAGTaGGGATTCCGAGGTAGCCAGTTCCGCTGGACTGAA +
Preference number: 6 (lower is better)
Translates to: TRRIAEDTLKEQ*GFRGSQFRWTE
Trigger: TTCAGTCCAGCGGAACTGGCTACCTCGGAATCCCAACTGCTCCTTTAGGGTGTCTTCCGCGATTCTCCGAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588216.5
CDS GCA 72 bp TCCTTGAGCAGCGGCGGGAATTGCTCAGAGAACTGCTaGCAGTTATCTTCCCCAACTTGGTCTTTGAAGCCG +
Preference number: 6 (lower is better)
Translates to: SLSSGGNCSENC*QLSSPTWSLKP
Trigger: CGGCTTCAAAGACCAAGTTGGGGAAGATAACTGGCAGCAGTTCTCTGAGCAATTCCCGCCGCTGCTCAAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356861.9
ENST00000425528.6
ENST00000450764.6
ENST00000588216.5
ENST00000589149.5
ENST00000592287.5
CDS CCA 72 bp AAGGAGCAGTTGGGATTCCGAGGTAGCCAGTTCCGCTaGACTGAAACCTGGGCTGAGAAACACGTGCAGAAA +
Preference number: 6 (lower is better)
Translates to: KEQLGFRGSQFR*TETWAEKHVQK
Trigger: TTTCTGCACGTGTTTCTCAGCCCAGGTTTCAGTCCAGCGGAACTGGCTACCTCGGAATCCCAACTGCTCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588216.5
CDS CAA 72 bp TGCATGCAGATTTCACCAATGGCCCAGGTGGCGTTGTaGCAGACGGAGATGAACTCTGGGTTCAGGTTGGTG +
Preference number: 6 (lower is better)
Translates to: CMQISPMAQVAL*QTEMNSGFRLV
Trigger: CACCAACCTGAACCCAGAGTTCATCTCCGTCTGCAACAACGCCACCTGGGCCATTGGTGAAATCTGCATGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356861.9
ENST00000425528.6
ENST00000450764.6
ENST00000585886.5
ENST00000588216.5
ENST00000592287.5
CDS CAA 72 bp GAGCAGATGGTAAAAAGCTGGAGACCCTGTAGCGTCTaGGTTTCCCCTCCCTGCCCTGCCGATAACAAAGTG +
Preference number: 6 (lower is better)
Translates to: EQMVKSWRPCSV*VSPPCPADNKV
Trigger: CACTTTGTTATCGGCAGGGCAGGGAGGGGAAACCAAGACGCTACAGGGTCTCCAGCTTTTTACCATCTGCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590781.1
CDS GCA 72 bp CTCTCCTTGAGCAGCGGCGGGAATTGCTCAGAGAACTaGTGCCAGTTATCTTCCCCAACTTGGTCTTTGAAG +
Preference number: 6 (lower is better)
Translates to: LSLSSGGNCSEN*CQLSSPTWSLK
Trigger: CTTCAAAGACCAAGTTGGGGAAGATAACTGGCAGCAGTTCTCTGAGCAATTCCCGCCGCTGCTCAAGGAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356861.9
ENST00000425528.6
ENST00000450764.6
ENST00000588216.5
ENST00000589149.5
ENST00000592287.5
CDS CCA 72 bp TTCCTTCTCTTGAGAGAGGAGCAGATGGTAAAAAGCTaGAGACCCTGTAGCGTCTTGGTTTCCCCTCCCTGC +
Preference number: 6 (lower is better)
Translates to: FLLLREEQMVKS*RPCSVLVSPPC
Trigger: GCAGGGAGGGGAAACCAAGACGCTACAGGGTCTCCAGCTTTTTACCATCTGCTCCTCTCTCAAGAGAAGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590781.1
CDS CAA 72 bp ATGGTGGCTCGGATGAGCGAGGAGGCATCGCCAATGTaGTTGAGACACTCCTGTTTGATGAAGTCTGCCACA +
Preference number: 6 (lower is better)
Translates to: MVARMSEEASPM*LRHSCLMKSAT
Trigger: TGTGGCAGACTTCATCAAACAGGAGTGTCTCAACAACATTGGCGATGCCTCCTCGCTCATCCGAGCCACCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000356861.9
ENST00000425528.6
ENST00000450764.6
ENST00000585886.5
ENST00000586775.5
ENST00000587654.5
ENST00000588216.5
ENST00000588484.1
ENST00000589956.5
ENST00000592287.5
CDS CAA 72 bp ATCTGCATGCAGATTTCACCAATGGCCCAGGTGGCGTaGTTGCAGACGGAGATGAACTCTGGGTTCAGGTTG +
Preference number: 6 (lower is better)
Translates to: ICMQISPMAQVA*LQTEMNSGFRL
Trigger: CAACCTGAACCCAGAGTTCATCTCCGTCTGCAACAACGCCACCTGGGCCATTGGTGAAATCTGCATGCAGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356861.9
ENST00000425528.6
ENST00000450764.6
ENST00000585886.5
ENST00000588216.5
ENST00000592287.5
CDS CAA 90 bp ATCCTTGCGACGTCTGAAGACAGTAGGGCACCGTTTTTCCTTCTCTaGAGAGAGGAGCAGATGGTAAAAAGCTGGAGACCCTGTAGCGTC +
Preference number: 6 (lower is better)
Translates to: ILATSEDSRAPFFLL*REEQMVKSWRPCSV
Trigger: GACGCTACAGGGTCTCCAGCTTTTTACCATCTGCTCCTCTCTCAAGAGAAGGAAAAACGGTGCCCTACTGTCTTCAGACGTCGCAAGGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000590781.1
CDS CCA 72 bp GAGACACTCCTGTTTGATGAAGTCTGCCACAGGGGGTaGGAAGCTCTGATAGTGTGCCTTCACGTTGTTCTT +
Preference number: 6 (lower is better)
Translates to: ETLLFDEVCHRG*EALIVCLHVVL
Trigger: AAGAACAACGTGAAGGCACACTATCAGAGCTTCCCACCCCCTGTGGCAGACTTCATCAAACAGGAGTGTCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000356861.9
ENST00000425528.6
ENST00000450764.6
ENST00000585886.5
ENST00000586775.5
ENST00000587654.5
ENST00000588216.5
ENST00000588484.1
ENST00000589956.5
ENST00000592287.5
CDS CCA 72 bp CCTTCAAGCTCAGTGGATGCCAGATATCCCCCTCTGTaGCCTAGCCAAATTCTAAGGATTCCCCTTAATCAG +
Preference number: 6 (lower is better)
Translates to: PSSSVDARYPPL*PSQILRIPLNQ
Trigger: CTGATTAAGGGGAATCCTTAGAATTTGGCTAGGCCACAGAGGGGGATATCTGGCATCCACTGAGCTTGAAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000450764.6
CDS CAA 72 bp ACGTCTGAAGACAGTAGGGCACCGTTTTTCCTTCTCTaGAGAGAGGAGCAGATGGTAAAAAGCTGGAGACCC +
Preference number: 6 (lower is better)
Translates to: TSEDSRAPFFLL*REEQMVKSWRP
Trigger: GGGTCTCCAGCTTTTTACCATCTGCTCCTCTCTCAAGAGAAGGAAAAACGGTGCCCTACTGTCTTCAGACGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000590781.1
CDS CAA 90 bp CGGCGGGAATTGCTCAGAGAACTGCTGCCAGTTATCTTCCCCAACTaGGTCTTTGAAGCCGTGGAGAATCTTATAAAACATGTCCCGAAG +
Preference number: 6 (lower is better)
Translates to: RRELLRELLPVIFPN*VFEAVENLIKHVPK
Trigger: CTTCGGGACATGTTTTATAAGATTCTCCACGGCTTCAAAGACCAAGTTGGGGAAGATAACTGGCAGCAGTTCTCTGAGCAATTCCCGCCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356861.9
ENST00000425528.6
ENST00000450764.6
ENST00000588216.5
ENST00000589149.5
ENST00000592287.5
CDS CAA 90 bp CGATTAGAGATCATCCAAGTTAAGCATGACCTGGCCAGCTCTGAATaGTTCCTTAAAAACGTGGCTTTACCCTCCAAGGCTCAAGGCTGT +
Preference number: 6 (lower is better)
Translates to: RLEIIQVKHDLASSE*FLKNVALPSKAQGC
Trigger: ACAGCCTTGAGCCTTGGAGGGTAAAGCCACGTTTTTAAGGAACAATTCAGAGCTGGCCAGGTCATGCTTAACTTGGATGATCTCTAATCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000590781.1
CDS CCA 72 bp ATGACCTGGCCAGCTCTGAATTGTTCCTTAAAAACGTaGCTTTACCCTCCAAGGCTCAAGGCTGTTCTTTTA +
Preference number: 6 (lower is better)
Translates to: MTWPALNCSLKT*LYPPRLKAVLL
Trigger: TAAAAGAACAGCCTTGAGCCTTGGAGGGTAAAGCCACGTTTTTAAGGAACAATTCAGAGCTGGCCAGGTCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590781.1
CDS CAA 72 bp ATCATCCAAGTTAAGCATGACCTGGCCAGCTCTGAATaGTTCCTTAAAAACGTGGCTTTACCCTCCAAGGCT +
Preference number: 6 (lower is better)
Translates to: IIQVKHDLASSE*FLKNVALPSKA
Trigger: AGCCTTGGAGGGTAAAGCCACGTTTTTAAGGAACAATTCAGAGCTGGCCAGGTCATGCTTAACTTGGATGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000590781.1
CDS TCA 72 bp AGAACTGCTGCCAGTTATCTTCCCCAACTTGGTCTTTaGAGCCGTGGAGAATCTTATAAAACATGTCCCGAA +
Preference number: 6 (lower is better)
Translates to: RTAASYLPQLGL*SRGESYKTCPE
Trigger: TTCGGGACATGTTTTATAAGATTCTCCACGGCTTCAAAGACCAAGTTGGGGAAGATAACTGGCAGCAGTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356861.9
ENST00000425528.6
ENST00000450764.6
ENST00000588216.5
ENST00000589149.5
ENST00000592287.5
CDS CAA 72 bp AATCAGGTAGTTGTTGAAGTCAGGAAACTGATTGAGTaGTTTGAGTTTATCCTGCACGATGCGCTGAGTGGC +
Preference number: 6 (lower is better)
Translates to: NQVVVEVRKLIE*FEFILHDALSG
Trigger: GCCACTCAGCGCATCGTGCAGGATAAACTCAAACAACTCAATCAGTTTCCTGACTTCAACAACTACCTGATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000356861.9
ENST00000425528.6
ENST00000450764.6
ENST00000585886.5
ENST00000586775.5
ENST00000587654.5
ENST00000588216.5
ENST00000589337.5
ENST00000589956.5
ENST00000590781.1
ENST00000592287.5
CDS CAA 72 bp TTGCTCAGAGAACTGCTGCCAGTTATCTTCCCCAACTaGGTCTTTGAAGCCGTGGAGAATCTTATAAAACAT +
Preference number: 6 (lower is better)
Translates to: LLRELLPVIFPN*VFEAVENLIKH
Trigger: ATGTTTTATAAGATTCTCCACGGCTTCAAAGACCAAGTTGGGGAAGATAACTGGCAGCAGTTCTCTGAGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356861.9
ENST00000425528.6
ENST00000450764.6
ENST00000588216.5
ENST00000589149.5
ENST00000592287.5